isoform	chrom	strand	length	exons	structural_category	associated_gene	associated_transcript	ref_length	ref_exons	diff_to_TSS	diff_to_TTS	diff_to_gene_TSS	diff_to_gene_TTS	subcategory	RTS_stage	all_canonical	min_sample_cov	min_cov	min_cov_pos	sd_cov	FL	n_indels	n_indels_junc	bite	iso_exp	gene_exp	ratio_exp	FSM_class	coding	ORF_length	CDS_length	CDS_start	CDS_end	CDS_genomic_start	CDS_genomic_end	predicted_NMD	perc_A_downstream_TTS	seq_A_downstream_TTS	dist_to_cage_peak	within_cage_peak	pos_cage_peak	dist_to_polya_site	within_polya_site	polyA_motif	polyA_dist	ORF_seq	TSS_genomic_coord	TTS_genomic_coord	experiment_id	entry_id	LRGASP_id
H1_mix_00000001	ERCC-00002	+	1045	1	FSM	ERCC-00002A	DQ459430	1045	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1045	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00002_+_0_1000
H1_mix_00000002	ERCC-00003	+	1007	1	FSM	ERCC-00003A	DQ516784	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AAAAAG	-30	NA	0	1007	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00003_+_0_1000
H1_mix_00000003	ERCC-00004	+	507	1	FSM	ERCC-00004A	DQ516752	507	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	GATAAA	-39	NA	0	507	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00004_+_0_500
H1_mix_00000004	ERCC-00009	+	968	1	FSM	ERCC-00009A	DQ668364	968	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00009_+_0_1000
H1_mix_00000009	ERCC-00022	+	735	1	FSM	ERCC-00022A	DQ855004	735	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	735	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00022_+_0_700
H1_mix_00000017	ERCC-00035	+	1114	1	FSM	ERCC-00035A	DQ459413	1114	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1114	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00035_+_0_1100
H1_mix_00000021	ERCC-00042	+	1007	1	FSM	ERCC-00042A	DQ516783	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AAAACA	-5	NA	0	1007	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00042_+_0_1000
H1_mix_00000022	ERCC-00043	+	1007	1	FSM	ERCC-00043A	DQ516787	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	TATAAA	-12	NA	0	1007	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00043_+_0_1000
H1_mix_00000024	ERCC-00046	+	506	1	FSM	ERCC-00046A	DQ516748	506	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	506	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00046_+_0_500
H1_mix_00000030	ERCC-00060	+	506	1	FSM	ERCC-00060A	DQ516763	506	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	506	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00060_+_0_500
H1_mix_00000036	ERCC-00071	+	626	1	FSM	ERCC-00071A	DQ883654	626	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	626	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00071_+_0_600
H1_mix_00000038	ERCC-00074	+	506	1	FSM	ERCC-00074A	DQ516754	506	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	506	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00074_+_0_500
H1_mix_00000042	ERCC-00079	+	628	1	FSM	ERCC-00079A	DQ883652	628	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	628	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00079_+_0_600
H1_mix_00000048	ERCC-00092	+	1108	1	FSM	ERCC-00092A	DQ459425	1108	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1108	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00092_+_0_1100
H1_mix_00000050	ERCC-00096	+	1091	1	FSM	ERCC-00096A	DQ459429	1091	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1091	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00096_+_0_1100
H1_mix_00000056	ERCC-00108	+	1005	1	FSM	ERCC-00108A	DQ668365	1005	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1005	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00108_+_0_1000
H1_mix_00000057	ERCC-00109	+	508	1	FSM	ERCC-00109A	DQ854998	520	1	12	0	12	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	12	520	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00109_+_0_500
H1_mix_00000058	ERCC-00111	+	978	1	FSM	ERCC-00111A	DQ883685	978	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	978	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00111_+_0_1000
H1_mix_00000060	ERCC-00113	+	825	1	FSM	ERCC-00113A	DQ883663	825	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	825	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00113_+_0_800
H1_mix_00000067	ERCC-00130	+	1051	1	FSM	ERCC-00130A	EF011072	1051	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1051	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00130_+_0_1100
H1_mix_00000068	ERCC-00131	+	755	1	FSM	ERCC-00131A	DQ855003	755	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	755	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00131_+_0_800
H1_mix_00000070	ERCC-00136	+	1025	1	FSM	ERCC-00136A	EF011063	1025	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1025	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00136_+_0_1000
H1_mix_00000075	ERCC-00145	+	1024	1	FSM	ERCC-00145A	DQ875386	1024	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1024	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00145_+_0_1000
H1_mix_00000083	ERCC-00160	+	727	1	FSM	ERCC-00160A	DQ883658	727	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00160_+_0_700
H1_mix_00000088	ERCC-00171	+	489	1	FSM	ERCC-00171A	DQ854994	489	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	489	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_ERCC-00171_+_0_500
H1_mix_00000089	SIRV1	+	702	3	FSM	SIRV1B	SIRV108	702	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	19.5	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAAGACATAGGGCGTGG	NA	False	NA	NA	False	NA	NA	NA	10582	11606	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV1_+_10792_10897_11188_11403
H1_mix_00000090	SIRV1	+	464	3	FSM	SIRV1B	SIRV109	464	3	0	0	0	0	multi-exon	FALSE	canonical	3	3769	junction_2	292.5	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTTCGGCTAATCATGT	NA	False	NA	NA	False	NA	NA	NA	10711	11643	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV1_+_10792_10882_11058_11434
H1_mix_00000091	SIRV1	-	1311	4	FSM	SIRV1A	SIRV102	1300	4	0	-11	0	5	multi-exon	FALSE	canonical	3	4568	junction_1	920.380718326208	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCATACTTCCTTCCTTG	NA	False	NA	NA	False	NA	NA	NA	10366	995	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV1_-_1485_6337_6814_7552_7815_10282
H1_mix_00000092	SIRV1	-	978	3	FSM	SIRV1A	SIRV106	973	3	0	-5	0	5	multi-exon	FALSE	canonical	3	800	junction_2	89.5	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCATACTTCCTTCCTTG	NA	False	NA	NA	False	NA	NA	NA	10786	995	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV1_-_1485_7552_7809_10553
H1_mix_00000093	SIRV1	-	1566	6	FSM	SIRV1A	SIRV101	1561	6	0	-5	0	5	multi-exon	FALSE	canonical	3	1611	junction_5	2170.82762097777	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCATACTTCCTTCCTTG	NA	False	NA	NA	False	NA	NA	NA	10786	995	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV1_-_1485_6337_6474_6560_6814_7552_7815_10282_10367_10444
H1_mix_00000094	SIRV1	-	1368	6	FSM	SIRV1A	SIRV103	1363	6	0	-5	0	5	multi-exon	FALSE	canonical	3	1369	junction_5	2229.6709533023	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCATACTTCCTTCCTTG	NA	False	NA	NA	False	NA	NA	NA	10791	995	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV1_-_1485_6337_6474_6560_6814_7552_7815_10282_10367_10647
H1_mix_00000095	SIRV1	-	779	4	NIC	SIRV1A	novel	670	5	NA	NA	-22	0	intron_retention	FALSE	canonical	3	1678	junction_3	2279.94653933425	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCTGGAAGTCAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	10662	6449	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_SIRV1_-_6814_7552_7815_10282_10367_10593
H1_mix_00000096	SIRV1	-	670	5	FSM	SIRV1A	SIRV105	670	5	0	0	0	0	multi-exon	FALSE	canonical	3	1678	junction_4	2400.71232918482	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCTGGAAGTCAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	10640	6449	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV1_-_6474_6560_6814_7552_7815_10282_10367_10593
H1_mix_00000097	SIRV1	-	1365	5	NIC	SIRV1A	novel	1363	6	NA	NA	-61	5	intron_retention	FALSE	canonical	3	1369	junction_4	2102.87475851511	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCATACTTCCTTCCTTG	NA	False	NA	NA	False	NA	NA	NA	10701	995	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_SIRV1_-_1485_6337_6814_7552_7815_10282_10367_10647
H1_mix_00000098	SIRV10001	+	9941	1	FSM	SIRV10001A	SIRV10001	9941	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	9941	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV10001_+_0_9900
H1_mix_00000099	SIRV10002	+	10001	1	FSM	SIRV10002A	SIRV10002	10001	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	10001	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV10002_+_0_10000
H1_mix_00000100	SIRV10003	+	9970	1	FSM	SIRV10003A	SIRV10003	9970	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	9970	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV10003_+_0_10000
H1_mix_00000101	SIRV12001	+	12029	1	FSM	SIRV12001A	SIRV12001	12029	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	12029	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV12001_+_0_12000
H1_mix_00000102	SIRV12002	+	11999	1	FSM	SIRV12002A	SIRV12002	11999	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AAGAAA	-36	NA	0	11999	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV12002_+_0_12000
H1_mix_00000105	SIRV2	-	2059	11	FSM	SIRV2A	SIRV201	2051	11	0	-8	0	8	multi-exon	FALSE	canonical	3	228	junction_6	1152.73999236601	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTGGCATGCGTACAATTT	NA	False	NA	NA	False	NA	NA	NA	5907	992	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV2_-_1662_1741_1854_1973_2065_2674_2803_2881_3011_3105_3375_3665_3826_3966_4095_4338_4480_4687_4801_5788
H1_mix_00000106	SIRV2	-	1971	11	FSM	SIRV2A	SIRV202	1971	11	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_6	1156.46264098759	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCGCTCTATAGCTGTATC	NA	False	NA	NA	False	NA	NA	NA	5911	1035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV2_-_1662_1741_1854_1973_2065_2674_2803_2881_3011_3105_3326_3665_3826_3966_4095_4338_4480_4687_4801_5788
H1_mix_00000107	SIRV2	-	741	3	FSM	SIRV2A	SIRV204	740	3	0	-1	0	1	multi-exon	FALSE	canonical	3	2837	junction_1	156	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTATCCTATATCGGAA	NA	False	NA	NA	False	NA	NA	NA	4732	3642	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV2_-_3826_3966_4480_4687
H1_mix_00000108	SIRV2	-	686	5	FSM	SIRV2A	SIRV203	686	5	0	0	0	0	multi-exon	FALSE	canonical	3	2454	junction_4	247.395432455816	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTGACGTGGACGTTTC	NA	False	NA	NA	False	NA	NA	NA	5895	3665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV2_-_3826_3966_4095_4338_4480_4687_4801_5751
H1_mix_00000109	SIRV2	-	1992	11	NIC	SIRV2A	novel	1971	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	183	junction_6	1185.48078432339	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCGCTCTATAGCTGTATC	NA	False	NA	NA	False	NA	NA	NA	5895	1035	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_SIRV2_-_1662_1741_1854_1973_2065_2674_2803_2881_3011_3105_3326_3665_3826_3966_4095_4338_4480_4687_4801_5751
H1_mix_00000110	SIRV3	+	1829	2	FSM	SIRV3A	SIRV302	1807	2	-22	0	-3	0	multi-exon	FALSE	canonical	3	879	junction_1	0	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTAACAGGTTCTCAAC	NA	False	NA	NA	False	NA	NA	NA	1941	7822	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV3_+_2006_6057
H1_mix_00000111	SIRV3	+	2376	3	FSM	SIRV3A	SIRV306	2373	3	-3	0	-3	0	multi-exon	FALSE	canonical	3	808	junction_2	1408	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACCTAACAGTAAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	1941	8292	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV3_+_2006_4003_4081_6057
H1_mix_00000112	SIRV3	+	1105	8	FSM	SIRV3A	SIRV304	1083	8	-22	0	-3	0	multi-exon	FALSE	canonical	3	1288	junction_5	1014.67123458079	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGTTAACGTCTCGTAAG	NA	False	NA	NA	False	NA	NA	NA	1941	8937	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV3_+_2006_4003_4081_4568_4780_6057_6334_7270_7367_7872_7989_8124_8208_8755
H1_mix_00000113	SIRV3	+	801	5	FSM	SIRV3A	SIRV307	779	5	-22	0	-3	0	multi-exon	FALSE	canonical	3	1392	junction_4	896.223325962899	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTAACGTCTCGTAAGAC	NA	False	NA	NA	False	NA	NA	NA	1941	8939	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV3_+_2006_4003_4081_4574_4775_6057_6334_8755
H1_mix_00000114	SIRV3	+	2470	5	FSM	SIRV3A	SIRV301	2467	5	-3	0	-3	0	multi-exon	FALSE	canonical	3	1268	junction_3	641.557626016557	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTAACGTCTCGTAAGAC	NA	False	NA	NA	False	NA	NA	NA	1941	8939	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV3_+_2006_4568_4780_6057_7989_8127_8208_8755
H1_mix_00000115	SIRV3	+	436	3	FSM	SIRV3A	SIRV305	436	3	0	0	0	0	multi-exon	FALSE	canonical	3	1841	junction_2	952.5	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAATCTTAATAGACGATT	NA	False	NA	NA	False	NA	NA	NA	4003	6718	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV3_+_4081_4568_4780_6570
H1_mix_00000116	SIRV3	-	482	3	FSM	SIRV3B	SIRV308	479	3	0	-3	0	3	multi-exon	FALSE	canonical	3	5946	junction_1	21.5	177	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTGTATGGCGGACAT	NA	False	NA	NA	False	NA	NA	NA	1982	997	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV3_-_1168_1532_1765_1902
H1_mix_00000117	SIRV3	-	595	3	FSM	SIRV3C	SIRV310	589	3	0	-6	0	6	multi-exon	FALSE	canonical	3	1458	junction_2	58	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTGGGTACTGGTGAT	NA	False	NA	NA	False	NA	NA	NA	9914	8753	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV3_-_8967_9189_9325_9667
H1_mix_00000118	SIRV3	-	796	3	FSM	SIRV3C	SIRV309	796	3	0	0	0	0	multi-exon	FALSE	canonical	3	1539	junction_2	37.5	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTCAAATATCTGTGTC	NA	False	NA	NA	False	CATAAA	-21	NA	9943	8797	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV3_-_8976_9189_9299_9434
H1_mix_00000119	SIRV3	+	494	4	NIC	SIRV3A	novel	436	3	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	1683	junction_2	880.122087490644	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAATCTTAATAGACGATT	NA	False	NA	NA	False	NA	NA	NA	1941	6718	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_SIRV3_+_2006_4003_4081_4574_4780_6570
H1_mix_00000120	SIRV3	+	2032	6	NIC	SIRV3A	novel	1083	8	NA	NA	-3	0	intron_retention	FALSE	canonical	3	1268	junction_4	973.032496887951	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGTTAACGTCTCGTAAG	NA	False	NA	NA	False	NA	NA	NA	1941	8937	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_SIRV3_+_2006_4003_4081_4568_4780_6570_7989_8127_8208_8755
H1_mix_00000121	SIRV3	+	2257	4	NIC	SIRV3A	novel	2467	5	NA	NA	-3	0	intron_retention	FALSE	canonical	3	879	junction_1	667.581206046625	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGTTAACGTCTCGTAAG	NA	False	NA	NA	False	NA	NA	NA	1941	8937	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_SIRV3_+_2006_6057_7989_8127_8208_8755
H1_mix_00000126	SIRV3	+	1570	4	NIC	SIRV3A	novel	436	3	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	1841	junction_3	870.69563504642	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTAACAGGTTCTCAAC	NA	False	NA	NA	False	NA	NA	NA	1975	7822	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_SIRV3_+_2006_4003_4081_4568_4780_6570
H1_mix_00000128	SIRV4	+	1572	3	FSM	SIRV4C	SIRV409	1567	3	-5	0	-5	0	multi-exon	FALSE	canonical	3	1107	junction_2	5.5	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATTGTAACCTGTCAAG	NA	False	NA	NA	False	NA	NA	NA	995	3403	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV4_+_1347_1678_1886_2389
H1_mix_00000130	SIRV4	+	952	2	FSM	SIRV4C	SIRV410	950	2	-2	0	-2	0	multi-exon	FALSE	canonical	3	1825	junction_1	0	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTATATGTTGTTGCTG	NA	False	NA	NA	False	NA	NA	NA	1453	2771	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV4_+_1886_2251
H1_mix_00000131	SIRV4	+	1446	2	ISM	SIRV4C	SIRV409	1567	3	453	0	-2	0	3prime_fragment	FALSE	canonical	3	1107	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATTGTAACCTGTCAAG	NA	False	NA	NA	False	NA	NA	NA	1453	3403	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_SIRV4_+_1886_2389
H1_mix_00000132	SIRV4	-	635	2	FSM	SIRV4B	SIRV406	617	2	0	-18	0	18	multi-exon	FALSE	canonical	3	2863	junction_1	0	231	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAACTTCAAGCTGTAGTA	NA	False	NA	NA	False	TTTAAA	-9	NA	5158	3619	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV4_-_4104_5007
H1_mix_00000133	SIRV4	-	594	4	FSM	SIRV4A	SIRV404	592	4	0	-2	0	2	multi-exon	FALSE	canonical	3	705	junction_3	3093.43250559418	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATATTTAGAGCGTATG	NA	False	NA	NA	False	NA	NA	NA	14623	8320	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV4_-_8373_8629_8991_13672_13823_14592
H1_mix_00000134	SIRV4	-	575	5	FSM	SIRV4A	SIRV408	570	5	-2	-3	-2	2	multi-exon	FALSE	canonical	0	0	junction_4	2931.04131453311	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATATTTAGAGCGTATG	NA	False	NA	NA	False	NA	NA	NA	15124	8320	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV4_-_8373_8629_8748_8846_8991_13672_13829_15019
H1_mix_00000135	SIRV4	-	672	4	FSM	SIRV4A	SIRV403	670	4	0	-2	0	2	multi-exon	FALSE	canonical	0	0	junction_3	3382.43472467196	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATATTTAGAGCGTATG	NA	False	NA	NA	False	NA	NA	NA	15122	8320	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV4_-_8373_8629_8991_13672_13829_15019
H1_mix_00000136	SIRV4	-	626	2	FSM	SIRV4A	SIRV405	626	2	0	0	0	0	multi-exon	FALSE	canonical	3	8281	junction_1	0	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTCTCTTTTCAGCAAG	NA	False	NA	NA	False	NA	NA	NA	13937	8629	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV4_-_8991_13672
H1_mix_00000137	SIRV4001	+	3997	1	FSM	SIRV4001A	SIRV4001	3997	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	3997	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV4001_+_0_4000
H1_mix_00000138	SIRV4002	+	3999	1	FSM	SIRV4002A	SIRV4002	3999	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	3999	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV4002_+_0_4000
H1_mix_00000140	SIRV5	+	554	2	FSM	SIRV5A	SIRV511	546	2	-8	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTACGGCCAGTTTAGC	NA	False	NA	NA	False	AATGAA	-17	NA	1000	2398	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV5_+_1144_1987
H1_mix_00000141	SIRV5	+	560	2	FSM	SIRV5A	SIRV506	552	2	-8	0	0	0	multi-exon	FALSE	canonical	3	12355	junction_1	0	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTACGGCCAGTTTAGC	NA	False	NA	NA	False	AATGAA	-17	NA	1000	2398	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV5_+_1150_1987
H1_mix_00000142	SIRV5	+	2003	18	FSM	SIRV5A	SIRV502	1984	18	-19	0	0	0	multi-exon	FALSE	canonical	3	719	junction_4	3693.94232068018	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTTTACCGCCAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	1000	10989	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2489_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858
H1_mix_00000143	SIRV5	+	2029	16	FSM	SIRV5A	SIRV505	2029	16	0	0	0	0	multi-exon	FALSE	canonical	3	6178	junction_10	2111.7668010986	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1000	10991	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
H1_mix_00000144	SIRV5	+	2093	17	FSM	SIRV5A	SIRV508	2085	17	-8	0	0	0	multi-exon	FALSE	canonical	3	2494	junction_10	2994.81247326106	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1000	10991	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
H1_mix_00000145	SIRV5	+	533	6	FSM	SIRV5A	SIRV507	533	6	0	0	0	0	multi-exon	FALSE	canonical	3	4180	junction_1	2926.22647107157	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGTAAGTGGTCAAGCCAC	NA	False	NA	NA	False	NA	NA	NA	1027	3598	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV5_+_1150_1925_2034_2119_2157_2270_2316_3298_3405_3483
H1_mix_00000146	SIRV5	+	2475	18	FSM	SIRV5A	SIRV510	2474	18	-1	0	0	0	multi-exon	FALSE	canonical	3	1730	junction_17	3130.11688429403	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAGTAACCTTGGTAACT	NA	False	NA	NA	False	AGTAAA	-11	NA	1027	11867	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858_10992_11133
H1_mix_00000147	SIRV5	+	1890	17	FSM	SIRV5A	SIRV501	1890	17	0	0	0	0	multi-exon	FALSE	canonical	3	2055	junction_14	3299.83510418987	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1056	10991	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV5_+_1150_1987_2034_2119_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858
H1_mix_00000148	SIRV5	+	526	3	FSM	SIRV5A	SIRV503	526	3	0	0	0	0	multi-exon	FALSE	canonical	3	1730	junction_2	5534.5	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTCGCTTGCCCAATTG	NA	False	NA	NA	False	NA	NA	NA	8201	11142	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV5_+_8586_10858_10992_11133
H1_mix_00000149	SIRV5	+	999	4	FSM	SIRV5A	SIRV509	885	4	-114	0	0	0	multi-exon	FALSE	canonical	3	1086	junction_3	5009.80165941394	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATAGTAACCTTGGTAAC	NA	False	NA	NA	False	AGTAAA	-10	NA	8201	11866	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV5_+_8382_8454_8586_10858_10992_11311
H1_mix_00000150	SIRV5	+	2473	1	FSM	SIRV5A	SIRV504	2473	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	290	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCATGTAAAACATTTGTT	NA	False	NA	NA	False	NA	NA	NA	11133	13606	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV5_+_11100_13600
H1_mix_00000153	SIRV5	+	2033	17	NNC	SIRV5A	novel	2085	17	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_6	4177.19280690917	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTTTACCGCCAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	1056	10989	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3643_5380_5451_5543_5627_6111_6169_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
H1_mix_00000155	SIRV6	+	1363	9	NIC	SIRV6A	novel	574	8	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	3414	junction_5	10369.1281425923	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAGACCGGGAGTATAC	NA	False	NA	NA	False	NA	NA	NA	998	11824	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_SIRV6_+_1187_1468_1535_1640_1736_2780_2829_3106_3165_7805_7924_10724_10819_11031_11109_11205
H1_mix_00000156	SIRV6	+	1437	9	FSM	SIRV6A	SIRV601	1435	9	-2	0	-2	0	multi-exon	FALSE	canonical	3	2297	junction_3	8536.74432874588	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGACCGGGAGTATACTT	NA	False	NA	NA	False	NA	NA	NA	998	11826	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV6_+_1187_1468_1535_1640_1736_2470_2621_2740_2829_3106_3165_10724_10819_11031_11109_11205
H1_mix_00000158	SIRV6	+	1528	10	FSM	SIRV6A	SIRV612	1528	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	8723.12040810632	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGACCGGGAGTATACT	NA	False	NA	NA	False	NA	NA	NA	1087	11825	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11031_11109_11205
H1_mix_00000159	SIRV6	+	1537	10	FSM	SIRV6A	SIRV604	1537	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	10244.6770291747	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATACTTAGTTCAATCTT	NA	False	NA	NA	False	NA	NA	NA	1087	11837	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11034_11109_11205
H1_mix_00000160	SIRV6	+	498	4	FSM	SIRV6A	SIRV609	485	4	-13	0	0	0	multi-exon	FALSE	canonical	3	16794	junction_3	6208.15930852294	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACAAGTCAAGCCATTGC	NA	False	NA	NA	False	NA	NA	NA	1124	2120	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845
H1_mix_00000161	SIRV6	+	580	4	FSM	SIRV6A	SIRV607	574	4	-6	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	11891.1818588398	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGCAGTCAAGTCGTAG	NA	False	NA	NA	False	NA	NA	NA	1124	2540	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV6_+_1187_1468_1736_1845_2027_2470
H1_mix_00000162	SIRV6	+	691	8	FSM	SIRV6A	SIRV602	574	8	-126	9	-2	0	multi-exon	TRUE	canonical	3	9392	junction_3	6562.61896762914	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTTATTAGCCTGCCTA	NA	False	NA	NA	False	NA	NA	NA	998	11270	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV6_+_1187_1468_1535_1640_1736_2780_2829_3106_3165_10724_10819_11031_11109_11205
H1_mix_00000163	SIRV6	+	1094	9	FSM	SIRV6A	SIRV605	1088	9	-6	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	9244.75309212609	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAGCAATCAACTCAC	NA	False	NA	NA	False	NA	NA	NA	1124	11331	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11031
H1_mix_00000164	SIRV6	+	1571	10	NIC	SIRV6A	novel	1528	10	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	11017.3446533126	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTAAAATGGGGTTTGCC	NA	False	NA	NA	False	ATTAAA	-5	NA	1124	11690	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_7805_7924_10724_10819_11031
H1_mix_00000165	SIRV6	+	456	3	FSM	SIRV6A	SIRV611	454	3	-2	0	-2	0	multi-exon	FALSE	canonical	3	2869	junction_1	13939	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGGTGTTTATAGTTTA	NA	False	NA	NA	False	NA	NA	NA	1301	1950	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV6_+_1382_1468_1535_1640
H1_mix_00000166	SIRV6	+	547	4	FSM	SIRV6A	SIRV606	545	4	-2	0	-2	0	multi-exon	FALSE	canonical	3	14247	junction_1	3623.37635669029	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTGAAAAAGTAATAGTGC	NA	False	NA	NA	False	NA	NA	NA	2283	10788	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV6_+_2621_2740_2829_3106_3165_10724
H1_mix_00000167	SIRV6	+	533	4	FSM	SIRV6A	SIRV616	531	4	-2	0	-2	0	multi-exon	FALSE	canonical	3	1017	junction_2	7976.38286164572	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTGAAAAAGTAATAGTGC	NA	False	NA	NA	False	NA	NA	NA	2283	10788	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV6_+_2621_2740_2815_3106_3165_10724
H1_mix_00000168	SIRV6	+	837	7	NIC	SIRV6A	novel	1435	9	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	3414	junction_3	8879.32462553068	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTTATTAGCCTGCCTA	NA	False	NA	NA	False	NA	NA	NA	2283	11270	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_SIRV6_+_2621_2740_2829_3106_3165_7805_7924_10724_10819_11031_11109_11205
H1_mix_00000169	SIRV6	+	1163	5	FSM	SIRV6A	SIRV610	1163	5	0	0	0	0	multi-exon	FALSE	canonical	3	14247	junction_1	3254.29027400753	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTAAAATGGGGTTTGCC	NA	False	NA	NA	False	ATTAAA	-5	NA	2472	11690	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV6_+_2621_2740_2829_3106_3165_10724_11109_11205
H1_mix_00000170	SIRV6	+	459	5	FSM	SIRV6A	SIRV614	459	5	0	0	0	0	multi-exon	FALSE	canonical	3	3414	junction_3	8043.65104834241	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAAGACTGTATCGGAG	NA	False	NA	NA	False	AAAAAG	-17	NA	2516	10815	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV6_+_2621_2740_2829_3106_3165_7805_7924_10724
H1_mix_00000171	SIRV6	+	380	4	FSM	SIRV6A	SIRV608	377	4	-3	0	-3	0	multi-exon	FALSE	canonical	3	20083	junction_1	2545.79880500317	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTTATTAGCCTGCCTA	NA	False	NA	NA	False	NA	NA	NA	3020	11270	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV6_+_3165_10724_10819_11031_11109_11205
H1_mix_00000172	SIRV6	+	1394	6	FSM	SIRV6A	SIRV613	1311	6	-83	0	-1	0	multi-exon	FALSE	canonical	3	506	junction_1	10867.1241200237	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAGACCGGGAGTATAC	NA	False	NA	NA	False	NA	NA	NA	3022	11824	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV6_+_3165_7104_7449_7805_7924_10724_10819_11031_11109_11205
H1_mix_00000173	SIRV6	+	1972	1	FSM	SIRV6A	SIRV603	1969	1	-3	0	-3	0	mono-exon	FALSE	NA	NA	NA	NA	NA	388	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGAAGATTTCGACCGAA	NA	False	NA	NA	False	ATTAAA	-26	NA	8996	10968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV6_+_9000_11000
H1_mix_00000174	SIRV6	+	783	3	FSM	SIRV6A	SIRV615	783	3	0	0	0	0	multi-exon	FALSE	canonical	3	21087	junction_2	2414	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAAGAGCAATCAACTCA	NA	False	NA	NA	False	NA	NA	NA	10237	11330	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV6_+_10819_11031_11109_11205
H1_mix_00000175	SIRV6	-	276	1	FSM	SIRV6B	SIRV617	276	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTCTACTTGGGCACCT	NA	False	NA	NA	False	NA	NA	NA	1820	1544	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV6_-_1500_1800
H1_mix_00000176	SIRV6	+	608	3	ISM	SIRV6A	SIRV609	485	4	-13	0	0	0	intron_retention	FALSE	canonical	3	29007	junction_1	870	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACAAGTCAAGCCATTGC	NA	False	NA	NA	False	NA	NA	NA	1124	2120	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_SIRV6_+_1187_1468_1535_1640
H1_mix_00000177	SIRV6	+	1160	10	NIC	SIRV6A	novel	1528	10	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_3	9984.741556526	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTTATTAGCCTGCCTA	NA	False	NA	NA	False	NA	NA	NA	1124	11270	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_SIRV6_+_1187_1468_1736_1845_2027_2470_2621_2740_2829_3106_3165_7805_7924_10724_10819_11031_11109_11205
H1_mix_00000178	SIRV6001	+	6000	1	FSM	SIRV6001A	SIRV6001	6000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	6000	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV6001_+_0_6000
H1_mix_00000179	SIRV6002	+	6000	1	FSM	SIRV6002A	SIRV6002	6000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	6000	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV6002_+_0_6000
H1_mix_00000180	SIRV6003	+	6000	1	FSM	SIRV6003A	SIRV6003	6000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	6000	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV6003_+_0_6000
H1_mix_00000181	SIRV7	-	2251	6	FSM	SIRV7A	SIRV702	2247	6	0	-4	0	4	multi-exon	FALSE	canonical	3	247	junction_3	1474.61759110625	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAATATGAATCAACTCTA	NA	False	NA	NA	False	TATAAA	-26	NA	114916	996	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV7_-_2676_2993_3112_4095_4180_4725_4811_43028_43078_114680
H1_mix_00000182	SIRV7	-	2502	5	FSM	SIRV7A	SIRV703	2498	5	0	-4	0	4	multi-exon	FALSE	canonical	3	1233	junction_2	1801.78014405199	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAATATGAATCAACTCTA	NA	False	NA	NA	False	TATAAA	-26	NA	147918	996	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV7_-_2676_2993_3112_3809_3897_114680_114989_147608
H1_mix_00000183	SIRV7	-	2605	7	NIC	SIRV7A	novel	2247	6	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	3	247	junction_3	1389.07675173916	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAATATGAATCAACTCTA	NA	False	NA	NA	False	TATAAA	-26	NA	147918	996	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_SIRV7_-_2676_2993_3112_4095_4180_4725_4811_43028_43078_114680_114961_147608
H1_mix_00000184	SIRV7	-	2500	5	FSM	SIRV7A	SIRV701	2462	5	-34	-4	0	1	multi-exon	FALSE	canonical	3	2070	junction_2	1376.48435788424	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGTTAATATGAATCAACT	NA	False	NA	NA	False	TATAAA	-23	NA	147957	999	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV7_-_2676_2993_3112_43028_43078_114680_114989_147608
H1_mix_00000186	SIRV7	-	1024	4	NIC	SIRV7A	novel	949	5	NA	NA	0	-3	intron_retention	FALSE	canonical	3	5405	junction_3	1443.68887075975	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTTTCGTATTTGCT	NA	False	NA	NA	False	ATTAAA	-30	NA	147957	55852	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_SIRV7_-_56098_78841_78964_114680_114989_147608
H1_mix_00000187	SIRV7	-	1106	6	NIC	SIRV7A	novel	889	6	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	2058.86176320801	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTCGTATTTGCTGCTT	NA	False	NA	NA	False	ATTAAA	-34	NA	147957	55848	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_SIRV7_-_56098_70883_70988_78841_78909_78928_78964_114686_114989_147608
H1_mix_00000188	SIRV7	-	1091	5	NIC	SIRV7A	novel	949	5	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_3	2221.26195832459	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTTCGTATTTGCTGCT	NA	False	NA	NA	False	ATTAAA	-33	NA	147923	55849	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_SIRV7_-_56098_70883_70988_78841_78964_114686_114989_147608
H1_mix_00000189	SIRV7	-	868	5	NIC	SIRV7A	novel	889	6	NA	NA	8	0	intron_retention	FALSE	canonical	0	0	junction_3	1973.84907921046	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAGAGATCGACGAAGTT	NA	False	NA	NA	False	NA	NA	NA	147910	56031	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_SIRV7_-_56098_70883_70988_78841_78964_114686_114961_147608
H1_mix_00000190	SIRV7	-	949	5	FSM	SIRV7A	SIRV706	949	5	0	0	0	0	multi-exon	FALSE	canonical	3	3450	junction_1	1852.2667700685	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAGAGATCGACGAAGTT	NA	False	NA	NA	False	NA	NA	NA	147957	56031	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV7_-_56098_70883_70988_78841_78964_114680_114989_147608
H1_mix_00000191	SIRV7	-	1079	6	FSM	SIRV7A	SIRV708	889	6	-1	-189	-1	1	multi-exon	FALSE	canonical	0	0	junction_4	1781.10201841444	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTCGTATTTGCTGCTT	NA	False	NA	NA	False	ATTAAA	-34	NA	147958	55848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV7_-_56098_70883_70988_78841_78909_78928_78964_114686_114961_147608
H1_mix_00000192	SIRV8001	+	8001	1	FSM	SIRV8001A	SIRV8001	8001	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	8001	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV8001_+_0_8000
H1_mix_00000193	SIRV8002	+	8000	1	FSM	SIRV8002A	SIRV8002	8000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	8000	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV8002_+_0_8000
H1_mix_00000194	SIRV8003	+	8000	1	FSM	SIRV8003A	SIRV8003	8000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	8000	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_SIRV8003_+_0_8000
H1_mix_00000201	chr1	+	5428	3	FSM	ENSG00000228794.11	ENST00000669922.1	5441	3	-5	18	0	-18	multi-exon	FALSE	canonical	3	15	junction_2	40.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATACTGCAATGATGAG	762	False	NA	NA	False	NA	NA	NA	827597	846347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_827776_829002_829105_841199
H1_mix_00000204	chr1	+	5306	7	FSM	ENSG00000228794.11	ENST00000659124.2	5333	7	27	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	34.7918413169269	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTATTTGCATGGCTAATA	799	False	NA	NA	False	NA	NA	NA	827634	859332	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_827776_829002_829105_847653_847807_851926_852111_852670_852767_853390_855137_856448
H1_mix_00000207	chr1	+	3468	14	FSM	ENSG00000187634.13	ENST00000618323.5	3468	14	0	0	0	0	multi-exon	TRUE	canonical	2	23	junction_6	65.6147984462951	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTGTCTACTGCCTCCC	-2	True	NA	10	True	AATAAA	-13	NA	923922	944574	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_924949_925921_926014_930154_930337_931038_931090_935771_935897_939039_939130_939271_939413_941143_941307_942135_942252_942409_942489_942558_943059_943252_943378_943697_943809_943907
H1_mix_00000217	chr1	+	7348	36	FSM	ENSG00000188157.15	ENST00000379370.7	7326	36	0	-22	0	20	multi-exon	TRUE	canonical	3	54	junction_5	64.4854294569316	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCGCGCTGGCCCGTTGG	21	True	NA	51	True	AATAAA	-40	NA	1020119	1056138	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_1020374_1022200_1022463_1035276_1035325_1040664_1040881_1041172_1041398_1041477_1041703_1041955_1042163_1043238_1043458_1043537_1043733_1043822_1044024_1044108_1044258_1044333_1044440_1045160_1045278_1045358_1045524_1045732_1045877_1045963_1046089_1046159_1046266_1046396_1046736_1046819_1046958_1047326_1047455_1047572_1047688_1047775_1047896_1048011_1048366_1048866_1049060_1049235_1049452_1049565_1049796_1049902_1050038_1050232_1050330_1050426_1050592_1050725_1050838_1051252_1051370_1051452_1051646_1051727_1051816_1053752_1053978_1054447_1054552_1054823
H1_mix_00000222	chr1	+	3385	3	FSM	ENSG00000188157.15	ENST00000461111.1	3385	3	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	6	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCATTGCTTTTGTCCA	4134	False	NA	25	True	AATAAA	-14	NA	1051985	1056112	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_1053978_1054447_1054552_1054823
H1_mix_00000237	chr1	+	4492	3	FSM	ENSG00000179403.12	ENST00000476993.2	4492	3	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_2	21.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGTGATAAACCAAGTCAAT	-14	True	NA	14	True	AATAAA	-23	NA	1435689	1442882	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_1435822_1436926_1437485_1439080
H1_mix_00000239	chr1	+	805	6	ISM	ENSG00000215915.10	ENST00000378785.7	3864	12	6536	1500	-6258	0	3prime_fragment	FALSE	canonical	1	2	junction_3	69.4797812316648	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACGGGGCGGGGTTTGGG	6420	False	NA	NA	False	AATAAA	-36	NA	1456224	1468663	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_1456350_1457128_1457181_1459160_1459232_1460749_1460918_1462599_1462709_1468383
H1_mix_00000241	chr1	+	4053	14	FSM	ENSG00000160072.20	ENST00000472194.6	4314	14	0	261	0	-261	multi-exon	FALSE	canonical	3	312	junction_12	134.780997027635	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTAGGTGGCTCACGCC	177	False	NA	NA	False	TTTAAA	-18	NA	1478025	1497587	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_1478746_1479048_1479109_1480866_1480937_1482137_1482304_1482544_1482615_1485015_1485172_1485781_1485839_1486109_1486236_1486543_1486669_1487862_1487915_1489203_1489275_1490256_1490425_1490562_1490672_1495484
H1_mix_00000243	chr1	+	403	2	FSM	ENSG00000197785.14	ENST00000439513.1	403	2	0	0	0	0	multi-exon	FALSE	canonical	3	767	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCTCAGCCTCCCCTGC	4528	False	NA	NA	False	NA	NA	NA	1517069	1517775	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_1517413_1517715
H1_mix_00000251	chr1	+	1058	5	FSM	ENSG00000197530.13	ENST00000483015.1	1058	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	185.181498805901	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGATTCTCGGACGTT	442	False	NA	-1	True	TATAAA	-1	NA	1628488	1630589	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_1628723_1629033_1629312_1629384_1629567_1629638_1629705_1630291
H1_mix_00000252	chr1	+	584	3	FSM	ENSG00000197530.13	ENST00000511910.1	584	3	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	205	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTTGCCTCTGCTGTCTG	82	False	NA	13	True	TATAAA	-15	NA	1629105	1630603	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_1629312_1629638_1629705_1630291
H1_mix_00000256	chr1	+	626	4	FSM	ENSG00000189409.14	ENST00000489782.1	626	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	19.0146142626022	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGTCCGTGTGCGGGGCTG	1370	False	NA	NA	False	NA	NA	NA	1633678	1634604	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_1633913_1633988_1634100_1634201_1634329_1634450
H1_mix_00000266	chr1	+	3041	7	FSM	ENSG00000157916.20	ENST00000605895.6	3028	7	-13	0	0	0	multi-exon	FALSE	canonical	3	775	junction_1	144.138436542405	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGAATTACTTCTCAAC	-17	True	NA	24	True	AATAAA	-16	NA	2391827	2405436	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_2391959_2395783_2395872_2397115_2397221_2399414_2399515_2400856_2400936_2402206_2402343_2403034
H1_mix_00000267	chr1	+	2469	6	FSM	ENSG00000157916.20	ENST00000488353.2	2469	6	0	0	0	0	multi-exon	FALSE	canonical	3	1011	junction_4	80.4472497976158	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGAGTCAAATTTTCTTTT	2160	False	NA	25	True	CATAAA	-14	NA	2394004	2403216	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_2395872_2397115_2397221_2399414_2399515_2400856_2400936_2402206_2402343_2403034
H1_mix_00000270	chr1	+	2779	7	FSM	ENSG00000157870.17	ENST00000419916.8	2747	7	-33	1	-6	0	multi-exon	FALSE	canonical	3	229	junction_5	75.4939291157463	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTTGTGCTTTCTTCTT	222	False	NA	18	True	AATAAA	-18	NA	2586743	2591467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_2586949_2587090_2587296_2587740_2587793_2588389_2588454_2588549_2588626_2588921_2589041_2589409
H1_mix_00000271	chr1	+	2710	7	FSM	ENSG00000157870.17	ENST00000378427.6	2689	7	-21	0	0	0	multi-exon	FALSE	canonical	3	188	junction_5	89.6519504652421	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCACTTTTTGTGCTTTCT	-31	True	NA	14	True	AATAAA	-14	NA	2586776	2591463	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_2586949_2587090_2587296_2587740_2587793_2588389_2588454_2588549_2588626_2588953_2589041_2589409
H1_mix_00000274	chr1	+	2842	15	NNC	ENSG00000130762.15	novel	2822	15	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_1	42.3124915217186	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGATTTTCACAGTGACT	9	True	NA	40	True	ATTAAA	-16	NA	3454677	3481113	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_3454845_3463065_3463673_3466147_3466194_3467167_3467338_3468879_3468937_3469432_3469594_3473077_3473231_3473392_3473523_3474707_3474783_3475969_3476063_3477874_3478027_3478423_3478613_3479516_3479591_3479811_3479914_3480447
H1_mix_00000276	chr1	+	2208	8	FSM	ENSG00000130762.15	ENST00000485984.1	2340	8	132	0	132	0	multi-exon	FALSE	canonical	3	191	junction_1	14.9188279892031	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGATTTTCACAGTGACT	1277	False	NA	40	True	ATTAAA	-16	NA	3472900	3481113	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_3473231_3473392_3473523_3474707_3474783_3475969_3476063_3477874_3478613_3479516_3479591_3479811_3479914_3480447
H1_mix_00000289	chr1	+	3899	15	FSM	ENSG00000069424.16	ENST00000666163.1	3878	15	-22	1	-22	0	multi-exon	FALSE	canonical	3	18	junction_1	11.1458329359781	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGACTTTTTGCTCCTCT	319	False	NA	21	True	AATAAA	-23	NA	5992616	6101187	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_5992789_6040516_6040646_6072754_6072799_6073732_6073771_6082194_6082275_6085203_6085249_6087466_6087512_6089007_6089052_6090388_6090476_6094399_6094486_6095322_6095444_6095529_6095625_6096635_6096757_6097268_6097358_6098484
H1_mix_00000296	chr1	+	470	1	FSM	ENSG00000271746.1	ENST00000607670.1	837	1	359	8	359	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCGGCTCCCTAGTGCAA	263	False	NA	NA	False	ATTAAA	-10	NA	6393913	6394383	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_6393900_6394400
H1_mix_00000307	chr1	+	1221	5	ISM	ENSG00000041988.16	ENST00000054650.9	1361	6	328	7	-2	-7	3prime_fragment	FALSE	canonical	3	81	junction_2	10.2347447452294	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTATACGGTGTCGCTCCC	6	True	NA	7	True	AATAAA	-7	NA	6625195	6633555	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_6625293_6628498_6628692_6630287_6630354_6632390_6632496_6632795
H1_mix_00000310	chr1	+	873	4	FSM	ENSG00000171735.19	ENST00000476163.5	863	4	-10	0	0	0	multi-exon	FALSE	canonical	3	310	junction_3	2347.84454340572	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGGTCACTTGCGTCG	-16	True	NA	9	True	AATAAA	-15	NA	6785453	6888201	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_6785576_6825091_6825211_6871756_6871841_6887653
H1_mix_00000312	chr1	+	546	4	FSM	ENSG00000171735.19	ENST00000467404.6	546	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	2626.57850951893	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTAATCTGTGTTTTCAT	11	False	NA	15	True	ATTAAA	-23	NA	6785517	6872019	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_6785576_6806982_6807089_6825091_6825211_6871756
H1_mix_00000313	chr1	+	828	5	FSM	ENSG00000171735.19	ENST00000461311.1	431	5	-34	-363	0	0	multi-exon	FALSE	canonical	3	310	junction_4	2050.1628441419	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGGACAGTGCTGACACAG	11	False	NA	-42	True	NA	NA	NA	6785517	6888150	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_6785576_6820180_6820251_6825091_6825211_6871756_6871841_6887653
H1_mix_00000320	chr1	+	4016	5	FSM	ENSG00000049245.13	ENST00000470357.1	954	5	-1436	-1626	-25	0	multi-exon	FALSE	canonical	3	11	junction_1	67.8431094511447	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGCACCTGTGCTCCTT	-38	True	NA	11	True	AATAAA	-17	NA	7771270	7781432	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_7773199_7773441_7773512_7777159_7777319_7778117_7778170_7779625
H1_mix_00000321	chr1	+	2199	5	FSM	ENSG00000049245.13	ENST00000054666.11	2178	5	-21	0	-21	0	multi-exon	FALSE	canonical	3	130	junction_1	18.4661853126194	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGCACCTGTGCTCCTT	-34	True	NA	11	True	AATAAA	-17	NA	7771274	7781432	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_7771386_7773441_7773512_7777159_7777319_7778117_7778170_7779625
H1_mix_00000323	chr1	+	274	2	FSM	ENSG00000049245.13	ENST00000487194.1	274	2	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTTACCCTTTTCTAAA	5788	False	NA	NA	False	NA	NA	NA	7777096	7778169	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_7777319_7778117
H1_mix_00000324	chr1	+	6365	22	FSM	ENSG00000049246.15	ENST00000377532.8	6365	22	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_18	10.8121456858047	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATTGTCCTGCCCTGTGT	-11	True	NA	14	True	AATAAA	-22	NA	7784290	7845177	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_7784377_7784653_7785006_7785440_7785587_7786720_7786837_7788044_7788247_7793956_7794009_7798524_7798674_7801112_7801192_7803046_7803154_7803691_7803849_7808892_7808999_7809892_7810022_7810437_7810589_7819284_7819421_7820114_7820240_7820466_7820641_7826479_7826711_7827117_7827816_7829833_7830162_7835761_7835946_7836998_7837150_7842671
H1_mix_00000327	chr1	+	6203	21	FSM	ENSG00000049246.15	ENST00000361923.2	6203	21	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	12.7140670125653	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATTGTCCTGCCCTGTGT	56	False	NA	14	True	AATAAA	-22	NA	7784702	7845177	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_7785006_7785440_7785587_7786720_7786837_7788044_7788247_7793959_7794009_7798524_7798674_7801112_7801192_7803046_7803154_7803691_7803849_7808892_7808999_7809892_7810022_7810437_7810568_7819284_7819421_7820114_7820240_7820466_7820641_7826479_7826711_7827117_7827816_7829836_7830162_7835761_7835946_7836998_7837150_7842671
H1_mix_00000330	chr1	+	1146	7	FSM	ENSG00000116288.13	ENST00000338639.10	1127	7	-19	0	0	0	multi-exon	FALSE	canonical	3	1390	junction_1	1134.28544565388	944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGTGTGGTGGCTCATG	1	True	NA	NA	False	ATTAAA	-15	NA	7961691	7985505	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_7961794_7962762_7962876_7965323_7965426_7969344_7969405_7970893_7970964_7977651_7977739_7984893
H1_mix_00000331	chr1	+	947	5	FSM	ENSG00000116288.13	ENST00000465354.5	949	5	0	2	0	-2	multi-exon	FALSE	canonical	3	1390	junction_1	1283.05424183859	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATAACCATTTTAAGATCC	10	False	NA	NA	False	NA	NA	NA	7961747	7971519	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_7961794_7962762_7962876_7965323_7965426_7969344_7969405_7970893
H1_mix_00000346	chr1	+	4714	27	FSM	ENSG00000130939.20	ENST00000253251.12	4772	27	58	0	58	0	multi-exon	FALSE	canonical	3	278	junction_13	35.0977502271288	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTCCCCTCTCCCCCT	NA	False	NA	-45	True	NA	NA	NA	10032889	10180367	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_10033695_10072027_10072215_10095460_10095597_10101107_10101196_10102947_10103093_10105515_10105745_10117458_10117601_10119512_10119614_10121961_10122077_10126793_10126878_10129391_10129449_10130499_10130617_10130714_10130814_10132368_10132483_10134987_10135187_10137066_10137206_10144939_10145040_10146962_10147091_10149183_10149283_10151325_10151562_10158355_10158483_10161141_10161287_10168135_10168271_10171137_10171330_10178643_10178819_10179415_10179563_10179894
H1_mix_00000351	chr1	+	10486	47	FSM	ENSG00000054523.19	ENST00000263934.10	6816	47	0	-3670	0	4	multi-exon	FALSE	canonical	3	14	junction_24	60.2158687611632	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGATGTGCATTTATTCTT	182	False	NA	33	True	AATAAA	-26	NA	10210804	10381607	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_10210879_10232249_10232435_10256246_10256324_10258492_10258673_10261904_10261971_10267379_10267559_10268151_10268264_10271501_10271580_10272240_10272307_10275427_10275504_10276320_10276400_10277985_10278129_10282399_10282534_10291081_10291162_10292046_10292123_10295085_10295166_10295659_10295767_10296581_10296666_10296896_10297078_10297173_10297247_10320042_10320137_10321708_10321858_10323883_10324063_10324757_10324896_10326110_10326360_10334519_10334639_10336656_10336743_10337073_10337204_10337370_10337534_10339768_10339860_10342049_10342169_10343231_10343288_10345844_10345954_10347760_10347828_10348648_10348734_10352630_10352737_10360928_10361044_10361691_10361826_10363282_10363345_10365099_10365246_10365408_10365649_10368466_10368539_10371140_10371263_10374315_10374466_10374853_10375047_10375254_10375374_10376544
H1_mix_00000357	chr1	+	340	2	Fusion	ENSG00000241563.4_ENSG00000175279.22	novel	312	2	NA	NA	0	-339	multi-exon	FALSE	canonical	3	54	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCTTTCCTCTCCTCCT	53	False	NA	15	True	AATAAA	-16	NA	10430511	10451659	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_+_10430569_10451376
H1_mix_00000358	chr1	+	1156	5	FSM	ENSG00000175279.22	ENST00000477755.1	914	5	-74	-168	-74	0	multi-exon	FALSE	canonical	3	152	junction_1	64.0800280898815	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAATAAAATAAAAAG	250	False	NA	NA	False	AATAGA	-5	NA	10430708	10442502	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_10431402_10433841_10433966_10434656_10434691_10440346_10440414_10442264
H1_mix_00000359	chr1	+	584	3	FSM	ENSG00000175279.22	ENST00000462462.1	584	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	141	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAATAAAATAAAAAG	370	False	NA	NA	False	AATAGA	-5	NA	10431122	10442502	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_10431402_10440346_10440414_10442264
H1_mix_00000364	chr1	+	1388	5	FSM	ENSG00000120948.19	ENST00000439080.6	1388	5	0	0	0	0	multi-exon	FALSE	canonical	2	74	junction_2	550.980659823918	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAAATATTGAGTGGTTG	-6	True	NA	124	True	AAAAAG	-41	NA	11012652	11022858	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_11012744_11013715_11013966_11018732_11018874_11020428_11020600_11022123
H1_mix_00000370	chr1	+	2226	1	FSM	ENSG00000120948.19	ENST00000607145.1	870	1	-1356	0	-1356	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGTTTGTAGTAGTCA	4756	False	NA	7	True	ATTAAA	-15	NA	11028302	11030528	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_11028300_11030500
H1_mix_00000376	chr1	+	3346	7	FSM	ENSG00000132879.14	ENST00000376770.5	3320	7	-29	3	-29	0	multi-exon	FALSE	canonical	3	42	junction_1	71.5885232887693	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCAGTCTCGGGTATTT	414	False	NA	NA	False	ATTAAA	-19	NA	11654827	11663324	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_11654953_11655327_11655700_11655805_11656101_11658266_11658394_11658532_11658629_11658735_11658872_11661129
H1_mix_00000377	chr1	+	2948	6	FSM	ENSG00000132879.14	ENST00000251547.10	2928	6	-20	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	57.2174798466343	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTCGGGTATTTCTT	443	False	NA	NA	False	ATTAAA	-22	NA	11654856	11663327	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_11654953_11655805_11656101_11658266_11658394_11658532_11658629_11658735_11658872_11661129
H1_mix_00000378	chr1	+	2136	6	NIC	ENSG00000132879.14	novel	1734	5	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	76.1698102925299	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCCCTGTGGTTTCTG	-11	True	NA	17	True	AATAAA	-18	NA	11654879	11662291	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_11654953_11655327_11655700_11655805_11656101_11658266_11658365_11658735_11658872_11661129
H1_mix_00000379	chr1	+	3053	5	NIC	ENSG00000132879.14	novel	2928	6	NA	NA	8	1	intron_retention	FALSE	canonical	3	142	junction_3	41.8173110087198	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCAGTCTCGGGTATTTC	-2	True	NA	NA	False	ATTAAA	-20	NA	11654888	11663325	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_11654953_11655805_11656101_11658266_11658629_11658735_11658872_11661129
H1_mix_00000380	chr1	+	3512	5	NIC	ENSG00000132879.14	novel	822	6	NA	NA	0	-2	intron_retention	FALSE	canonical	3	93	junction_1	66.8393596618041	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACCCAGTCTCGGGTAT	19	True	NA	NA	False	ATTAAA	-17	NA	11654909	11663322	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_11655700_11655805_11656101_11658266_11658365_11658735_11658872_11661129
H1_mix_00000390	chr1	+	1105	5	FSM	ENSG00000177674.16	ENST00000376629.8	1100	5	-5	0	0	0	multi-exon	FALSE	canonical	3	195	junction_4	285.335767123577	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCTGTGTTTTGAACCAC	-11	True	NA	15	True	ATTAAA	-20	NA	11736141	11750771	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_11736236_11745802_11745838_11747439_11747546_11748414_11748590_11750076
H1_mix_00000397	chr1	+	1065	12	FSM	ENSG00000011021.23	ENST00000376492.3	1062	12	-3	0	0	0	multi-exon	FALSE	canonical	3	24	junction_11	38.6146463028073	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCATTCCAGCTCCAGG	24	False	NA	NA	False	NA	NA	NA	11806259	11829303	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_11806350_11807130_11807191_11815845_11815912_11816614_11816681_11819487_11819555_11822694_11822802_11823706_11823834_11824485_11824554_11826155_11826215_11827088_11827222_11828105_11828220_11829195
H1_mix_00000398	chr1	+	5352	22	NIC	ENSG00000011021.23	novel	5589	23	NA	NA	1	0	intron_retention	FALSE	canonical	3	24	junction_11	30.517605788111	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTCCTTTAGCCTTT	25	False	NA	6	True	AATAAA	-15	NA	11806260	11843130	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_11806350_11807130_11807191_11815845_11815912_11816614_11816681_11819487_11819555_11822694_11822802_11823706_11823834_11824485_11824554_11826155_11826215_11827088_11827222_11828105_11828220_11829195_11829323_11833514_11833639_11833876_11834031_11834235_11834396_11834483_11834591_11835966_11836154_11836998_11837157_11837342_11837500_11838334_11838443_11838534_11838661_11840142
H1_mix_00000399	chr1	+	996	1	FSM	ENSG00000285646.2	ENST00000666735.1	1180	1	332	-148	331	148	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	333	False	NA	NA	False	NA	NA	NA	11908482	11909478	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_11908500_11909500
H1_mix_00000403	chr1	+	4513	18	FSM	ENSG00000116688.18	ENST00000444836.5	4531	18	18	0	8	0	multi-exon	FALSE	canonical	3	32	junction_1	67.328045745771	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATCTGTCTTTTTGGGTTC	9532	False	NA	20	True	AATAAA	-23	NA	11980198	12013514	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_11980485_11989164_11989344_11992554_11992691_11996155_11996319_11997296_11997422_11998769_11998879_11998987_11999096_12001400_12001555_12001768_12001837_12001981_12002104_12003991_12004119_12004508_12004614_12004824_12004928_12005710_12005932_12006537_12006694_12007052_12007250_12009591_12009727_12011495
H1_mix_00000404	chr1	+	4573	19	NIC	ENSG00000116688.18	novel	4580	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_1	59.4476894233727	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATATTGGAAACTAAAATAA	9570	False	NA	-23	True	NA	NA	NA	11980236	12013471	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_11980485_11981973_11982115_11989164_11989344_11992554_11992691_11996155_11996319_11997296_11997422_11998769_11998879_11998987_11999096_12001400_12001555_12001768_12001837_12001981_12002104_12003991_12004119_12004508_12004614_12004824_12004928_12005710_12005932_12006537_12006694_12007052_12007250_12009591_12009727_12011495
H1_mix_00000406	chr1	+	4566	19	FSM	ENSG00000116688.18	ENST00000235329.10	4407	19	-196	37	10	0	multi-exon	FALSE	canonical	3	186	junction_1	34.4484316688648	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATATTGGAAACTAAAATAA	9581	False	NA	-23	True	NA	NA	NA	11980247	12013471	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_11980485_11981969_11982115_11989164_11989344_11992554_11992691_11996155_11996319_11997296_11997422_11998769_11998879_11998987_11999096_12001400_12001555_12001768_12001837_12001981_12002104_12003991_12004119_12004508_12004614_12004824_12004928_12005710_12005932_12006537_12006694_12007052_12007250_12009591_12009727_12011495
H1_mix_00000407	chr1	+	1541	10	FSM	ENSG00000116691.11	ENST00000235332.6	1541	10	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_1	94.818475045091	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCACGTGTGCTGGTTCC	-2	True	NA	31	True	AATAAA	-22	NA	12019497	12032045	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_12019553_12021644_12021841_12022094_12022443_12022832_12022918_12029032_12029142_12029222_12029282_12029764_12029895_12030027_12030125_12031265_12031404_12031721
H1_mix_00000408	chr1	+	1325	9	NIC	ENSG00000116691.11	novel	1541	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	201	junction_1	173.844578575232	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTGCTCTGCAGCTCAA	-2	True	NA	11	True	AATAAA	-2	NA	12019497	12032025	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_12019553_12022094_12022443_12022832_12022918_12029032_12029142_12029222_12029282_12029764_12029895_12030027_12030125_12031265_12031404_12031721
H1_mix_00000410	chr1	+	1392	6	FSM	ENSG00000116691.11	ENST00000498685.5	1392	6	0	0	0	0	multi-exon	FALSE	canonical	3	658	junction_2	41.9075172254334	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCCCACGTGTGCTGGTT	3364	False	NA	29	True	AATAAA	-20	NA	12022863	12032043	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_12022918_12029032_12029142_12029222_12029895_12030027_12030125_12031265_12031404_12031721
H1_mix_00000412	chr1	+	3752	14	NIC	ENSG00000120949.15	novel	3760	15	NA	NA	-46	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_11	18.4993203137576	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGAGGACATGATCATCG	90	False	NA	27	True	CATAAA	-19	NA	12063256	12144207	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_12063662_12084463_12084552_12097100_12097218_12104378_12104532_12109565_12109657_12110040_12110205_12111897_12112015_12115576_12115730_12123283_12123378_12123714_12123828_12125950_12126053_12135587_12135614_12138228_12138437_12142286
H1_mix_00000420	chr1	+	4329	5	FSM	ENSG00000162493.17	ENST00000510906.5	786	5	-100	-3443	-29	0	multi-exon	FALSE	canonical	3	808	junction_4	90.3908181177712	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGAGTCAGACTTTTGTT	-39	True	NA	13	True	AATAAA	-19	NA	13583732	13617957	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_13584101_13607172_13607307_13610386_13610517_13613686_13613726_13614299
H1_mix_00000421	chr1	+	2801	6	FSM	ENSG00000162493.17	ENST00000376057.8	2801	6	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_5	203.912334104634	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGAGTCAGACTTTTGTT	-10	True	NA	13	True	AATAAA	-19	NA	13583761	13617957	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_13584101_13607172_13607307_13610386_13610517_13613686_13613726_13614299_13614406_13615904
H1_mix_00000423	chr1	+	6175	4	FSM	ENSG00000116731.23	ENST00000413440.5	6175	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	3.68178700572909	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGAAAGGACTGCATTT	17	False	NA	7	True	AATAAA	-15	NA	13749402	13788079	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_13749488_13773077_13773189_13778417_13782832_13786514
H1_mix_00000425	chr1	+	5592	7	FSM	ENSG00000189337.17	ENST00000491547.1	5592	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	9.61624782450111	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAAAGAAA	15	False	NA	NA	False	TTTAAA	-45	NA	14598703	15066560	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_14599224_14960683_14960876_15034748_15034886_15043988_15044160_15056090_15056281_15060171_15063623_15065629
H1_mix_00000426	chr1	+	4066	8	ISM	ENSG00000189337.17	ENST00000376030.7	6049	15	-135	49894	-135	-3	5prime_fragment	FALSE	canonical	3	23	junction_1	9.13392420751187	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCGAATTCTATGTTATT	NA	False	NA	8	True	AATAAA	-16	NA	14598549	15068149	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_14599224_14960683_14960876_15034748_15034886_15043988_15044160_15056090_15056281_15060171_15060303_15063571_15063623_15065629
H1_mix_00000427	chr1	+	3880	8	FSM	ENSG00000189337.17	ENST00000361144.9	3838	8	-45	3	-45	-3	multi-exon	FALSE	canonical	3	18	junction_1	10.3193893190618	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCGAATTCTATGTTATT	NA	False	NA	8	True	AATAAA	-16	NA	14924084	15068149	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_14924573_14960683_14960876_15034748_15034886_15043988_15044160_15056090_15056281_15060171_15060303_15063571_15063623_15065629
H1_mix_00000430	chr1	+	1993	4	FSM	ENSG00000171729.14	ENST00000376008.3	1971	4	-22	0	-8	0	multi-exon	FALSE	canonical	3	32	junction_2	11.7284080571728	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGGGTGCTGAGTTACT	-16	True	NA	11	True	AATAAA	-18	NA	15153724	15220478	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_15153955_15210489_15210563_15214894_15215432_15219325
H1_mix_00000431	chr1	+	1850	3	FSM	ENSG00000171729.14	ENST00000400796.7	1842	3	-8	0	-8	0	multi-exon	FALSE	canonical	3	34	junction_1	12.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAGGAAATGTTCTTTTT	-16	True	NA	-59	True	AAAAAG	-15	NA	15153724	15220408	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_15153955_15214894_15215432_15219325
H1_mix_00000434	chr1	+	6038	15	FSM	ENSG00000116138.13	ENST00000375847.8	6034	15	-4	0	-4	0	multi-exon	FALSE	canonical	3	38	junction_5	11.1851304354103	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGGGTAGCCCTTGCAT	-31	True	NA	23	True	AATAAA	-20	NA	15526843	15571733	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_15526959_15529087_15529273_15534236_15534304_15536474_15536815_15544398_15544584_15546766_15546872_15548269_15548429_15559525_15559657_15562141_15562326_15563928_15564112_15564282_15564360_15565918_15566000_15566081_15566181_15567098_15567270_15567777
H1_mix_00000435	chr1	+	508	2	FSM	ENSG00000116138.13	ENST00000479655.1	510	2	2	0	2	0	multi-exon	FALSE	canonical	3	57	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAAGTGTTAGGTGAGCCA	NA	False	NA	NA	False	AATGAA	-24	NA	15565819	15566409	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_15566000_15566081
H1_mix_00000438	chr1	+	1051	4	FSM	ENSG00000197312.12	ENST00000486680.1	1501	4	0	450	0	-450	multi-exon	FALSE	canonical	3	74	junction_3	10.6144555520604	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTGAGCAGAAGCCACCAT	27	False	NA	NA	False	GATAAA	-10	NA	15617542	15633856	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_15617809_15626668_15626799_15630324_15630562_15633438
H1_mix_00000440	chr1	+	4004	19	FSM	ENSG00000116786.13	ENST00000375793.2	4004	19	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	20.6340842321331	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTGTCACTGGCCCTTTT	65	False	NA	21	True	AATAAA	-22	NA	15684389	15734769	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_15684619_15716236_15716344_15716706_15716817_15717892_15717993_15718537_15718626_15719733_15719921_15725316_15725546_15727013_15727833_15728078_15728149_15728266_15728358_15728668_15728734_15729101_15729191_15729796_15729930_15730531_15730723_15731191_15731258_15731888_15732049_15732349_15732530_15732611_15732729_15733796
H1_mix_00000442	chr1	+	1450	6	FSM	ENSG00000162460.7	ENST00000375782.2	1443	6	-7	0	-7	0	multi-exon	FALSE	canonical	3	10	junction_3	3.2	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGCTTAGAATCACGAA	5627	False	NA	12	True	AATAAA	-18	NA	15742491	15747982	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_15742648_15742834_15742908_15743019_15743195_15744159_15744581_15746866_15747055_15747545
H1_mix_00000444	chr1	+	3369	9	FSM	ENSG00000162458.13	ENST00000375766.8	3314	9	-55	0	-44	0	multi-exon	FALSE	canonical	3	347	junction_1	52.8251833882288	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATGTTGTGTGTAGGCT	767	False	NA	23	True	AATAAA	-21	NA	15758739	15786589	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_15758849_15764495_15764686_15764963_15765234_15767375_15767564_15768527_15768631_15770408_15770579_15774617_15774797_15777169_15777288_15784547
H1_mix_00000445	chr1	+	3372	9	NIC	ENSG00000162458.13	novel	3314	9	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	3	192	junction_1	88.544392114916	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATGTTGTGTGTAGGCT	767	False	NA	23	True	AATAAA	-21	NA	15758739	15786589	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_15758849_15764492_15764686_15764963_15765234_15767375_15767564_15768527_15768631_15770408_15770579_15774617_15774797_15777169_15777288_15784547
H1_mix_00000446	chr1	+	590	4	FSM	ENSG00000162458.13	ENST00000431771.6	577	4	-13	0	0	0	multi-exon	FALSE	canonical	3	192	junction_1	119.409659017463	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCCCCTCCACCGCCCCC	-10	True	NA	NA	False	NA	NA	NA	15758783	15767437	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_15758849_15764492_15764686_15764963_15765234_15767375
H1_mix_00000448	chr1	+	3342	9	NIC	ENSG00000162458.13	novel	3314	9	NA	NA	-152	0	combination_of_known_junctions	TRUE	canonical	3	192	junction_1	110.061843410875	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATGTTGTGTGTAGGCT	659	False	NA	23	True	AATAAA	-21	NA	15758631	15786589	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_15758849_15764492_15764548_15764963_15765234_15767375_15767564_15768527_15768631_15770408_15770579_15774617_15774797_15777169_15777288_15784547
H1_mix_00000449	chr1	+	3174	9	NIC	ENSG00000162458.13	novel	3314	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	194	junction_2	88.9747155095199	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATGTTGTGTGTAGGCT	3	True	NA	23	True	AATAAA	-21	NA	15758796	15786589	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_15758849_15764495_15764548_15764963_15765234_15767375_15767564_15768527_15768631_15770408_15770579_15774617_15774797_15777169_15777288_15784547
H1_mix_00000458	chr1	+	2203	13	FSM	ENSG00000184908.20	ENST00000375667.7	2129	13	-74	0	-74	0	multi-exon	FALSE	canonical	3	14	junction_9	5.67646212197547	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGTCCATCCCTCATC	4877	False	NA	18	True	AATAAA	-14	NA	16048714	16057308	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_16049246_16049617_16049703_16049814_16049917_16050515_16050601_16050874_16051049_16051477_16051548_16051709_16051821_16052197_16052412_16053638_16053773_16055434_16055524_16055677_16055759_16056421_16056509_16056868
H1_mix_00000459	chr1	+	3633	4	FSM	ENSG00000055070.17	ENST00000471507.5	892	4	-5	-2736	-5	0	multi-exon	FALSE	canonical	3	86	junction_2	262.689085337696	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATCTTTGTCCTCATTT	NA	False	NA	21	True	TATAAA	-30	NA	16367082	16398142	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_16367309_16391374_16391425_16393230_16393483_16395037
H1_mix_00000460	chr1	+	3456	3	FSM	ENSG00000055070.17	ENST00000401089.3	3447	3	-13	4	-13	-1	multi-exon	FALSE	canonical	3	237	junction_1	237	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGATCTTTGTCCTCATT	45	False	NA	20	True	TATAAA	-29	NA	16367211	16398141	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_16367309_16393227_16393483_16395037
H1_mix_00000461	chr1	+	3506	4	FSM	ENSG00000055070.17	ENST00000401088.9	3480	4	-30	4	-13	-1	multi-exon	FALSE	canonical	3	152	junction_2	241.178126887346	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGATCTTTGTCCTCATT	45	False	NA	20	True	TATAAA	-29	NA	16367211	16398141	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_16367309_16391374_16391425_16393227_16393483_16395037
H1_mix_00000463	chr1	+	3423	3	FSM	ENSG00000055070.17	ENST00000492354.1	3401	3	-23	1	0	-1	multi-exon	FALSE	canonical	3	287	junction_1	212	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGATCTTTGTCCTCATT	3	True	NA	20	True	TATAAA	-29	NA	16367241	16398141	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_16367309_16393230_16393483_16395037
H1_mix_00000466	chr1	+	1941	7	FSM	ENSG00000157191.20	ENST00000443980.6	1929	7	-12	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	152.545894733356	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGTATGTGAAAGATGAAT	-5	True	NA	10	True	AATAAA	-17	NA	16440723	16460077	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_16440854_16443631_16443733_16447869_16447975_16448059_16448142_16449092_16449202_16451837_16452016_16458841
H1_mix_00000467	chr1	+	2029	9	NNC	ENSG00000157191.20	novel	1787	9	NA	NA	0	46337	intron_retention	FALSE	non_canonical	0	0	junction_8	139.544739689463	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCGTCTATTATTCATACC	7	True	NA	NA	False	NA	NA	NA	16440735	16506415	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_16440854_16443631_16443733_16447869_16447975_16448059_16448142_16449092_16449202_16451837_16452016_16455817_16455894_16458841_16460075_16506388
H1_mix_00000477	chr1	+	4505	27	NIC	ENSG00000074964.17	novel	4625	29	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	3	150	junction_1	28.1029384216134	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGAGGTTTTGTTGTGGT	-33	True	NA	23	True	AATAAA	-25	NA	17539689	17697873	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_17539951_17580552_17580633_17587459_17587646_17588445_17588480_17602126_17602219_17603507_17603592_17607801_17607978_17616093_17616203_17619338_17619446_17621863_17621942_17622995_17623176_17624386_17624504_17625955_17626049_17627329_17627504_17632320_17632467_17634834_17635017_17637887_17638004_17638561_17638690_17640201_17640303_17648553_17648676_17654635_17654723_17655878_17656103_17656553_17656709_17664446_17664596_17687572_17687748_17695157_17695281_17696847
H1_mix_00000482	chr1	+	4513	20	FSM	ENSG00000074964.17	ENST00000469726.5	4585	20	72	0	72	0	multi-exon	FALSE	canonical	3	185	junction_7	24.0661599637678	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTGGACTTGGATTGAG	NA	False	NA	10	True	AATAAA	-12	NA	17615159	17697860	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_17616203_17619338_17619446_17621863_17621942_17622995_17623176_17624386_17624504_17625955_17626049_17627329_17627504_17632320_17632467_17634834_17635017_17637887_17638004_17638561_17638690_17640201_17640303_17648553_17648676_17654635_17654723_17655878_17656103_17656553_17656709_17664446_17664596_17687572_17687748_17695157_17695281_17696847
H1_mix_00000490	chr1	+	2175	8	FSM	ENSG00000040487.13	ENST00000375153.8	2175	8	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_6	11.4071227301012	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTGCTTCTGTTGCTCCT	11	True	NA	25	True	AATAAA	-34	NA	19312325	19329300	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_19312890_19317599_19317842_19324632_19324763_19325494_19325583_19326244_19326388_19326530_19326624_19327226_19327413_19328571
H1_mix_00000491	chr1	+	1805	9	FSM	ENSG00000040487.13	ENST00000375155.7	1805	9	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	16.7760990698076	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTGCTTCTGTTGCTCCT	11	True	NA	25	True	AATAAA	-34	NA	19312325	19329300	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_19312359_19312728_19312890_19317599_19317842_19324632_19324763_19325494_19325583_19326244_19326388_19326530_19326624_19327226_19327413_19328571
H1_mix_00000494	chr1	+	686	3	FSM	ENSG00000173436.15	ENST00000617872.4	3678	3	-200	3192	-200	0	multi-exon	FALSE	canonical	3	112	junction_1	2255	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCATTGCATGGCCTTTGT	NA	False	NA	9	True	AATAAA	-18	NA	19596776	19626629	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_19597110_19623473_19623584_19626386
H1_mix_00000495	chr1	+	813	5	FSM	ENSG00000173436.15	ENST00000467029.5	583	5	-224	-6	-200	0	multi-exon	FALSE	canonical	3	63	junction_1	2224.7463900409	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCATTGCATGGCCTTTGT	NA	False	NA	9	True	AATAAA	-18	NA	19596776	19626629	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_19597110_19617257_19617337_19622099_19622148_19623473_19623584_19626386
H1_mix_00000497	chr1	+	2024	4	FSM	ENSG00000158747.15	ENST00000375136.8	2024	4	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	7.07106781186548	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTCTCCTCCTCACTGA	-15	True	NA	24	True	AATAAA	-14	NA	19644310	19658452	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_19644447_19655011_19655201_19655323_19655436_19656865
H1_mix_00000498	chr1	+	3818	3	FSM	ENSG00000158748.4	ENST00000289753.2	3800	3	-18	0	-18	0	multi-exon	FALSE	canonical	2	4	junction_1	1.5	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTGTGGTGTGGACTGG	13	False	NA	NA	False	AATAAA	-16	NA	19664856	19680966	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_19666468_19678566_19678726_19678918
H1_mix_00000499	chr1	+	6529	8	FSM	ENSG00000169914.6	ENST00000375120.4	6515	8	-14	0	-14	0	multi-exon	FALSE	canonical	3	13	junction_5	4.94046184736874	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTAAGTTGTTTTTATCA	-31	True	NA	NA	False	AATAAA	-19	NA	19882380	19912945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_19882735_19890384_19890534_19894367_19894481_19897539_19897663_19904266_19904399_19904890_19904988_19906431_19906617_19907569
H1_mix_00000500	chr1	+	4852	2	FSM	ENSG00000162543.6	ENST00000375099.4	5562	2	11	699	11	-699	multi-exon	FALSE	canonical	2	8	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGCGCCCTCTGGCTGCC	1	True	NA	NA	False	NA	NA	NA	20186106	20195351	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_20186154_20190546
H1_mix_00000502	chr1	+	820	4	FSM	ENSG00000158825.6	ENST00000375071.4	809	4	-11	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	6.18241233033047	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAAGCGTGTGTCTTGCTC	-4	True	NA	20	True	TATAAA	-20	NA	20589085	20618903	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_20589284_20604927_20605040_20613841_20613900_20618451
H1_mix_00000504	chr1	+	2657	8	FSM	ENSG00000158828.8	ENST00000321556.5	2657	8	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_1	32.3791316014699	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTCTAGTTTTCTCTTC	-17	True	NA	14	True	AGTAAA	-17	NA	20633457	20651511	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_20633936_20637841_20638130_20639891_20639993_20644489_20644673_20645559_20645724_20648504_20648633_20648994_20649232_20650433
H1_mix_00000509	chr1	+	933	6	FSM	ENSG00000142794.19	ENST00000486229.5	933	6	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	13.2151428293454	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGTAAGTTCTATAGGCTC	27	False	NA	NA	False	NA	NA	NA	21440237	21468894	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_21440349_21444947_21445220_21466086_21466157_21467181_21467310_21468440_21468586_21468687
H1_mix_00000511	chr1	+	2244	10	FSM	ENSG00000162551.14	ENST00000539907.5	2241	10	-3	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	392.490087945928	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCCGAGGACAGAGCTGA	-2	True	NA	24	True	AATAAA	-12	NA	21509422	21578399	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_21509518_21560625_21560746_21563109_21563285_21564040_21564217_21568103_21568248_21570304_21570375_21573664_21573800_21575732_21575925_21576521_21576642_21577382
H1_mix_00000515	chr1	+	1389	2	FSM	ENSG00000218510.9	ENST00000634712.2	1388	2	4	-5	4	1	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGCTGTGGTGATTAATC	-3	True	NA	12	True	AATAAA	-2	NA	22025501	22031224	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_22025946_22030279
H1_mix_00000519	chr1	+	1437	6	FSM	ENSG00000070831.17	ENST00000315554.13	1435	6	-2	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	211.187689035133	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGATGAAGCTTTATTC	2	True	NA	NA	False	ATTAAA	-23	NA	22052706	22090807	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_22052743_22078428_22078584_22081721_22081795_22086438_22086549_22086668_22086867_22089942
H1_mix_00000521	chr1	+	8643	18	FSM	ENSG00000184677.18	ENST00000375647.5	8701	18	0	58	0	-58	multi-exon	FALSE	canonical	3	19	junction_3	6.91870740172806	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAATGTATTTAATATAGAA	-3	True	NA	-48	True	ATTAAA	-10	NA	22451850	22531096	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_22452005_22489879_22490646_22491399_22491534_22501491_22501685_22502298_22502442_22506048_22506242_22508000_22508138_22508529_22508732_22509099_22509234_22511178_22511348_22511675_22512135_22512923_22513131_22517299_22517465_22520060_22520276_22521495_22521659_22522376_22522464_22524217_22524445_22526201
H1_mix_00000523	chr1	+	1802	5	FSM	ENSG00000070886.12	ENST00000374644.8	1802	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	11.247221879202	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTCGGATGATCATTTTC	77	False	NA	NA	False	AATAAA	-19	NA	22563563	22589621	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_22563730_22569288_22569354_22576216_22576881_22586479_22586636_22588870
H1_mix_00000527	chr1	+	3039	19	FSM	ENSG00000004487.18	ENST00000465864.2	3039	19	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_12	824.363675288888	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTCATATAAAATTGGCC	0	True	NA	-1	True	NA	NA	NA	23019442	23083672	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_23019948_23030468_23030635_23050386_23050521_23053760_23053840_23055068_23055162_23055931_23056039_23057483_23057566_23059072_23059168_23068538_23068682_23069060_23069152_23071224_23071360_23072123_23072198_23073273_23073404_23077227_23077361_23078989_23079178_23079552_23079668_23081445_23081574_23082219_23082367_23083178
H1_mix_00000529	chr1	+	3671	19	FSM	ENSG00000004487.18	ENST00000691682.1	3710	19	71	-32	46	-8	multi-exon	FALSE	canonical	3	199	junction_18	799.36516478182	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAATAAAACTTCATATAA	9	True	NA	-9	True	NA	NA	NA	23019513	23083664	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_23019948_23030468_23030635_23050386_23050521_23053760_23053840_23055068_23055162_23055931_23056039_23057483_23057566_23059072_23059168_23068538_23068682_23069060_23069152_23071224_23071360_23072123_23072198_23073291_23073404_23077227_23077361_23078989_23079178_23079552_23079668_23081445_23081574_23082219_23082367_23082449
H1_mix_00000530	chr1	+	2810	1	FSM	ENSG00000004487.18	ENST00000602503.1	2810	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTGGCCCTCTCTTTTG	9511	False	NA	9	True	AATAAA	-10	NA	23080872	23083682	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_23080900_23083700
H1_mix_00000537	chr1	+	838	6	FSM	ENSG00000142676.14	ENST00000467075.2	823	6	-15	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	4661.59318688364	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTTGTGTGTTCTGTGA	5	True	NA	23	True	AATAAA	-23	NA	23691805	23696425	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_23692061_23692608_23692760_23693806_23693914_23694659_23694792_23695797_23695909_23696343
H1_mix_00000538	chr1	+	966	6	FSM	ENSG00000142676.14	ENST00000643754.2	1017	6	0	51	0	-51	multi-exon	FALSE	canonical	3	6271	junction_1	2662.79367582244	6160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGACAGGCTTTGGTGTG	5	True	NA	NA	False	NA	NA	NA	23691805	23696784	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_23691830_23692608_23692760_23693806_23693914_23694659_23694792_23695797_23695909_23696343
H1_mix_00000539	chr1	+	1437	5	FSM	ENSG00000142676.14	ENST00000458455.2	879	5	-564	6	0	0	multi-exon	FALSE	canonical	3	6685	junction_4	2295.02585769747	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAATGTGCAATTCTGTT	NA	False	NA	10	True	AATAAA	-39	NA	23691741	23696412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_23692760_23693806_23693914_23694659_23694792_23695797_23695909_23696343
H1_mix_00000542	chr1	+	1655	10	FSM	ENSG00000011009.11	ENST00000374514.8	1635	10	-20	0	-20	0	multi-exon	TRUE	canonical	3	1752	junction_1	132.477904050934	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCAGGCCTGGCTGATTC	NA	False	NA	13	True	ATTAAA	-17	NA	23791124	23795539	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_23791251_23792656_23792761_23793007_23793040_23793150_23793217_23793704_23793753_23793859_23793931_23794062_23794137_23794223_23794326_23794426_23794601_23794681
H1_mix_00000548	chr1	+	768	2	FSM	ENSG00000001461.17	ENST00000488155.1	931	2	-16	179	-6	-179	multi-exon	FALSE	canonical	3	70	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCACCTGTAGTCCCAGC	-3	True	NA	NA	False	ACTAAA	-28	NA	24415795	24419949	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_24415905_24419290
H1_mix_00000551	chr1	+	4156	2	ISM	ENSG00000001461.17	ENST00000003912.7	5481	13	48153	0	7790	0	3prime_fragment	FALSE	canonical	3	36	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGAGTTCGTGTCTTAT	17	False	NA	13	True	ATTAAA	-15	NA	24463955	24472976	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_24464121_24468985
H1_mix_00000553	chr1	+	7147	5	FSM	ENSG00000117602.13	ENST00000374395.9	6863	5	-284	0	201	0	multi-exon	FALSE	canonical	3	68	junction_1	9.75640815054393	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATTGAGTTGAGTTTTT	2	True	NA	21	True	AATAAA	-23	NA	24502551	24541040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_24503151_24514313_24514568_24531217_24531392_24533082_24533255_24535092
H1_mix_00000554	chr1	+	2639	5	NIC	ENSG00000117602.13	novel	6863	5	NA	NA	106	-3	intron_retention	FALSE	canonical	3	35	junction_1	22.3941956765587	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCATTGTGCCCATTTT	-10	True	NA	19	True	AATAAA	-20	NA	24503002	24537016	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_24503118_24514313_24514568_24531217_24531392_24533082_24533255_24535092
H1_mix_00000557	chr1	+	771	7	FSM	ENSG00000133226.18	ENST00000468822.5	768	7	-3	0	0	0	multi-exon	FALSE	canonical	1	105	junction_5	659.536642904193	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAAGGAGAAGACCCGAC	-19	True	NA	NA	False	AAAAAG	-5	NA	24643271	24652514	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970_24650087_24651498_24651613_24652433
H1_mix_00000559	chr1	+	3735	17	FSM	ENSG00000133226.18	ENST00000323848.14	3735	17	0	0	0	0	multi-exon	FALSE	canonical	1	465	junction_6	317.272697917344	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAGTAGTGCTTATGTAAA	11	True	NA	39	True	AATAAA	-31	NA	24643301	24673281	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970_24650087_24651408_24651613_24652433_24652629_24652912_24653033_24654854_24655130_24660718_24660800_24661309_24661397_24662659_24662805_24666814_24666926_24669122_24669588_24670119_24670316_24671385_24671596_24672181
H1_mix_00000560	chr1	+	3767	18	NIC	ENSG00000133226.18	novel	3735	17	NA	NA	0	-10	combination_of_known_junctions	FALSE	canonical	1	465	junction_6	417.954981764791	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTCTTACTTAGTAGTG	11	True	NA	29	True	AATAAA	-21	NA	24643301	24673271	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970_24650087_24651408_24651613_24652433_24652629_24652912_24653033_24654854_24655130_24660718_24660800_24661309_24661397_24662659_24662805_24663182_24663225_24666814_24666926_24669122_24669588_24670119_24670316_24671385_24671596_24672181
H1_mix_00000561	chr1	+	3707	17	NIC	ENSG00000133226.18	novel	3735	17	NA	NA	5	-11	combination_of_known_junctions	FALSE	canonical	1	284	junction_9	418.1318385091	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACTCTTACTTAGTAGT	22	True	NA	28	True	AATAAA	-20	NA	24643312	24673270	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970_24650087_24651408_24651613_24652433_24652629_24652912_24653033_24654854_24655124_24660718_24660800_24661309_24661397_24662659_24662805_24666814_24666926_24669122_24669588_24670119_24670316_24671385_24671596_24672181
H1_mix_00000569	chr1	+	2199	6	FSM	ENSG00000183726.11	ENST00000498135.5	776	6	-29	-1394	-29	0	multi-exon	FALSE	canonical	3	49	junction_2	414.450769090854	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTAGTCTTTAATTTTT	NA	False	NA	29	True	ATTAAA	-17	NA	25338287	25362361	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_25338457_25340473_25340580_25351625_25351694_25352881_25352975_25356792_25356854_25360659
H1_mix_00000570	chr1	+	1108	6	FSM	ENSG00000183726.11	ENST00000480937.5	1102	6	-6	0	0	0	multi-exon	FALSE	canonical	3	49	junction_4	438.583811830761	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCACCAGGCTCCCTGTGT	-5	True	NA	NA	False	NA	NA	NA	25338316	25361279	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_25338457_25340473_25340580_25342960_25343074_25351625_25351694_25356792_25356854_25360659
H1_mix_00000582	chr1	+	2082	7	FSM	ENSG00000117640.18	ENST00000474295.5	1873	7	-217	8	-214	0	multi-exon	TRUE	canonical	3	24	junction_5	82.8869712319132	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGCATTTGCTGTGTCC	3269	False	NA	9	True	ATTAAA	-17	NA	25819711	25832934	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_25820030_25823018_25823129_25823643_25823749_25826301_25826412_25826614_25826827_25829617_25829831_25831920
H1_mix_00000584	chr1	+	1890	7	FSM	ENSG00000117640.18	ENST00000374307.9	1868	7	-22	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	83.9880943943843	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATTTGCTGTGTCCATCT	10	True	NA	13	True	ATTAAA	-21	NA	25819980	25832938	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_25820030_25823018_25823129_25823643_25823749_25826301_25826412_25826614_25826827_25829544_25829831_25831920
H1_mix_00000586	chr1	+	304	1	FSM	ENSG00000229786.1	ENST00000440710.1	251	1	10	-63	10	63	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGGGTTTTTTTGTTTTG	NA	False	NA	NA	False	AATAAA	-10	NA	25887369	25887673	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_25887400_25887700
H1_mix_00000596	chr1	+	3978	14	FSM	ENSG00000130695.16	ENST00000252992.8	3935	14	-44	1	-42	0	multi-exon	FALSE	canonical	3	87	junction_13	51.6422605713874	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTCAGTTTTCCATACCC	8564	False	NA	16	True	AATAAA	-14	NA	26234157	26278807	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26234311_26239761_26239839_26244165_26244319_26255170_26255866_26257596_26257731_26258142_26258261_26259616_26259803_26268482_26268636_26269459_26269615_26271013_26271108_26272020_26272072_26274963_26275072_26276534_26276761_26277132
H1_mix_00000597	chr1	+	751	3	FSM	ENSG00000142669.15	ENST00000270792.10	751	3	0	0	0	0	multi-exon	FALSE	canonical	3	3194	junction_1	30	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTCTGGTTGGTTGTGG	3	True	NA	36	True	ATTAAA	-22	NA	26280085	26281522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26280204_26280764_26280933_26281057
H1_mix_00000598	chr1	+	768	2	FSM	ENSG00000142669.15	ENST00000319041.6	768	2	0	0	0	0	multi-exon	FALSE	canonical	3	3194	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAAAGGCCCCGCAGTCC	-1	True	NA	-36	True	NA	NA	NA	26280121	26281450	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26280204_26280764
H1_mix_00000599	chr1	+	467	2	FSM	ENSG00000169442.9	ENST00000374213.3	467	2	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGGTCCTGCTTGTGGTT	0	True	NA	19	True	AATAAA	-19	NA	26317957	26320523	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26318072_26320170
H1_mix_00000601	chr1	+	3975	4	FSM	ENSG00000131914.11	ENST00000326279.11	3975	4	0	0	0	0	multi-exon	FALSE	canonical	3	2539	junction_1	111.804392678563	899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTTGTCAGATGTTTTT	0	True	NA	37	True	AATAAA	-29	NA	26410816	26429728	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26410923_26411385_26411583_26425302_26425488_26426241
H1_mix_00000604	chr1	+	3261	9	FSM	ENSG00000117682.17	ENST00000360009.6	3245	9	-16	0	0	0	multi-exon	FALSE	canonical	3	54	junction_8	59.4637494613315	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGATGTAAAACTTGTTTG	11	True	NA	9	True	AATAGA	-15	NA	26432338	26471294	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26432377_26432890_26433009_26438167_26438285_26442730_26442874_26446315_26446433_26447558_26447661_26457790_26457906_26460036_26460145_26468891
H1_mix_00000607	chr1	+	3343	9	NIC	ENSG00000117682.17	novel	703	6	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	60.3032700191291	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGATGTAAAACTTGTTTG	12	True	NA	9	True	AATAGA	-15	NA	26432395	26471294	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_26432519_26432890_26433009_26438167_26438285_26442730_26442874_26446315_26446433_26447558_26447661_26457790_26457906_26460036_26460145_26468894
H1_mix_00000612	chr1	+	1045	5	FSM	ENSG00000198830.11	ENST00000460563.5	1045	5	0	0	0	0	multi-exon	FALSE	canonical	3	10833	junction_2	687.759905417581	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACATGGCCACCTTGGCA	-8	True	NA	NA	False	NA	NA	NA	26472476	26475432	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26472628_26473482_26473528_26473702_26474136_26474571_26474668_26475112
H1_mix_00000615	chr1	+	943	6	FSM	ENSG00000198830.11	ENST00000467700.5	932	6	-11	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	4663.25178389501	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCTGTCAAAAGAGCAGTG	0	True	NA	NA	False	NA	NA	NA	26472505	26475626	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26472628_26473482_26473528_26473702_26473818_26474084_26474136_26474571_26474668_26475112
H1_mix_00000616	chr1	+	2040	5	FSM	ENSG00000198830.11	ENST00000466194.1	952	5	-689	-399	0	-6	multi-exon	FALSE	canonical	3	10833	junction_1	594.497687127545	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGAATGCTGCCTCTGA	11	False	NA	NA	False	AATAAA	-16	NA	26472516	26475964	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26473528_26473702_26473733_26474084_26474136_26474571_26474668_26475112
H1_mix_00000617	chr1	+	1496	2	FSM	ENSG00000198830.11	ENST00000493418.1	1496	2	0	0	0	0	multi-exon	FALSE	canonical	3	12170	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACACCTTTCCCTTCTA	206	False	NA	NA	False	AATAGA	-28	NA	26473428	26475360	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26474136_26474571
H1_mix_00000619	chr1	+	8606	20	NIC	ENSG00000117713.21	novel	8595	20	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	34.8278711582876	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTTTTGTGAAGCTTTT	-25	True	NA	8	True	AATAAA	-19	NA	26695998	26782102	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_26697541_26729650_26729864_26731151_26731605_26732675_26732793_26760855_26761097_26761383_26761474_26762151_26762320_26762972_26763286_26766220_26766367_26766456_26766567_26767789_26768000_26771118_26771327_26772499_26772633_26772814_26772988_26773345_26773497_26773579_26773718_26773801_26773899_26774328_26775221_26775576_26775708_26779022
H1_mix_00000620	chr1	+	8611	20	FSM	ENSG00000117713.21	ENST00000324856.13	8595	20	-16	0	-16	0	multi-exon	FALSE	canonical	3	35	junction_13	36.1127044656408	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTTGTGAAGCTTTTTA	-25	True	NA	10	True	AATAAA	-21	NA	26695998	26782104	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26697541_26729650_26729864_26731151_26731605_26732675_26732793_26760855_26761097_26761383_26761474_26762151_26762320_26762972_26763286_26766220_26766367_26766456_26766567_26767789_26768000_26771118_26771327_26772499_26772633_26772811_26772988_26773345_26773497_26773579_26773718_26773801_26773899_26774328_26775221_26775576_26775708_26779022
H1_mix_00000623	chr1	+	4394	4	FSM	ENSG00000060642.12	ENST00000674222.1	4377	4	-17	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	23.4568161143456	1478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCTGTCCTCAAATAACT	-28	True	NA	NA	False	AATAAA	-16	NA	26787949	26800659	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26787990_26790758_26790894_26794112_26795235_26797562
H1_mix_00000627	chr1	+	1275	7	FSM	ENSG00000204160.12	ENST00000488397.3	1275	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	70.6464200555603	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGGCTGTCTGGTGGCGC	NA	False	NA	NA	False	AATAAA	-23	NA	26850361	26857602	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26850439_26850557_26850607_26851128_26851232_26852752_26852866_26853725_26853826_26856184_26856263_26856847
H1_mix_00000629	chr1	+	1792	9	FSM	ENSG00000090273.14	ENST00000321265.10	1792	9	0	0	0	0	multi-exon	TRUE	canonical	3	3016	junction_8	98.7142340293435	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTAGTCTATGTATGTT	-12	True	NA	9	True	AATAAA	-14	NA	26921742	26946871	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26921930_26924088_26924167_26941456_26941661_26941752_26941819_26942659_26942777_26942870_26943066_26945389_26945474_26945567_26945687_26946129
H1_mix_00000635	chr1	+	4054	15	NIC	ENSG00000142784.16	novel	4706	16	NA	NA	49	0	intron_retention	FALSE	canonical	3	7	junction_13	26.9227921043468	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTGGTGGCATTTGTG	-21	True	NA	16	True	ATTAAA	-17	NA	27234716	27308244	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_27234952_27260955_27261103_27263151_27263236_27282238_27282286_27283337_27283450_27287673_27287862_27292214_27292398_27294021_27294117_27294513_27294630_27296325_27296402_27297047_27297157_27297937_27298112_27301225_27301462_27305000_27305194_27306185
H1_mix_00000637	chr1	+	1744	7	FSM	ENSG00000186501.15	ENST00000464720.5	1665	7	-76	-3	8	3	multi-exon	FALSE	canonical	3	29	junction_2	101.020487471052	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCCCTGTCATTGTTTTC	2	True	NA	30	True	AATAAA	-18	NA	27322170	27336403	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_27322392_27330719_27330805_27330984_27331138_27332069_27332102_27333957_27334055_27334150_27334282_27335378
H1_mix_00000638	chr1	+	375	4	FSM	ENSG00000186501.15	ENST00000466759.5	368	4	-7	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	105.834251964517	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGAGCTATTGCTGGTTTG	-24	True	NA	NA	False	AATAAA	-16	NA	27322246	27332559	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_27322392_27330719_27330805_27332069_27332102_27332446
H1_mix_00000641	chr1	+	2841	2	FSM	ENSG00000186501.15	ENST00000470223.1	2841	2	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGGTGCCCTGTCATTGT	7141	False	NA	26	True	AATAAA	-14	NA	27333462	27336399	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_27334055_27334150
H1_mix_00000643	chr1	+	2525	13	FSM	ENSG00000142765.18	ENST00000483926.5	2525	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	31.2706598374046	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAAGGCTGGTGTCTGC	4	True	NA	NA	False	AATAAA	-16	NA	27342056	27353930	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_27342368_27345296_27345526_27347420_27347570_27347807_27347881_27347966_27348013_27349079_27349153_27349397_27349766_27349971_27350486_27350793_27350953_27351257_27351337_27351455_27351556_27353282_27353489_27353712
H1_mix_00000644	chr1	+	413	2	NIC	ENSG00000142765.18	novel	1900	15	NA	NA	-109	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAAGGCTGGTGTCTGCTG	6549	False	NA	NA	False	AATAAA	-18	NA	27351362	27353932	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_27351556_27353712
H1_mix_00000645	chr1	+	590	3	ISM	ENSG00000142765.18	ENST00000615284.1	793	4	315	7	-82	0	3prime_fragment	FALSE	canonical	3	88	junction_1	10.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAAGGCTGGTGTCTGC	6576	False	NA	NA	False	AATAAA	-16	NA	27351389	27353930	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_27351556_27353282_27353489_27353712
H1_mix_00000646	chr1	+	2153	2	FSM	ENSG00000181773.7	ENST00000374024.4	2137	2	-14	-2	-14	2	multi-exon	FALSE	canonical	3	57	junction_1	0	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCCCTATGTGTGTGTG	799	False	NA	NA	False	AATAAA	-21	NA	27392607	27395816	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_27392738_27393793
H1_mix_00000647	chr1	+	223	1	FSM	ENSG00000235912.1	ENST00000433132.1	192	1	16	-47	16	47	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTAAACTTCTCTATTC	NA	False	NA	NA	False	NA	NA	NA	27649434	27649657	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_27649400_27649700
H1_mix_00000648	chr1	+	1682	7	FSM	ENSG00000009780.16	ENST00000419687.6	1661	7	-21	0	14	0	multi-exon	FALSE	canonical	1	1	junction_3	12.2836838484589	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCAGAAAGCAAGGTTGTC	0	True	NA	NA	False	NA	NA	NA	27725974	27761473	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_27726162_27727471_27727537_27732602_27732658_27744653_27744812_27755194_27755331_27759525_27759628_27760494
H1_mix_00000654	chr1	+	2328	7	FSM	ENSG00000117751.18	ENST00000311772.10	2340	7	12	0	12	0	multi-exon	FALSE	canonical	2	9	junction_4	3.24893144826965	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAATGAGAGAATGTAGT	-6	True	NA	17	True	AATAAA	-24	NA	27830793	27851676	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_27830892_27832755_27832817_27838698_27838853_27841013_27841235_27843185_27843331_27847027_27847093_27850092
H1_mix_00000655	chr1	+	1092	4	FSM	ENSG00000130775.16	ENST00000373927.7	1082	4	-10	0	-4	0	multi-exon	FALSE	canonical	3	11	junction_2	34.2960963117119	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGAAGACCCTTATGGAG	-10	True	NA	NA	False	NA	NA	NA	27872538	27886533	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_27872666_27876587_27876729_27885294_27885452_27885866
H1_mix_00000657	chr1	+	2861	2	FSM	ENSG00000130775.16	ENST00000492877.1	2861	2	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAATGAGAACGGTATCA	823	False	NA	17	True	AATAAA	-20	NA	27883397	27886673	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_27885452_27885866
H1_mix_00000658	chr1	+	1881	8	FSM	ENSG00000130768.15	ENST00000373894.8	1866	8	-15	0	-15	0	multi-exon	FALSE	canonical	3	304	junction_3	17.835987468587	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTTGTGTTCCTTTT	-9	True	NA	21	True	AAAACA	-20	NA	27934984	27959152	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_27935245_27945231_27945446_27949064_27949163_27953214_27953359_27954353_27954527_27955683_27955865_27955948_27956083_27958475
H1_mix_00000659	chr1	+	4291	7	FSM	ENSG00000130768.15	ENST00000373888.8	1548	7	-71	-2672	-32	0	multi-exon	FALSE	canonical	3	304	junction_3	19.2649653228053	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTTGTGTTCCTTTT	4	True	NA	21	True	AAAACA	-20	NA	27934967	27959152	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_27935245_27945231_27945446_27949064_27949163_27953214_27953359_27954353_27954527_27955683_27955865_27955948
H1_mix_00000661	chr1	+	2253	4	FSM	ENSG00000158156.9	ENST00000675575.1	2243	4	-10	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	52.0917993119412	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCATGAAATCCTCCAAC	NA	False	NA	1	True	AATAAA	-1	NA	27959932	27968077	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_27960363_27963496_27963694_27964184_27964236_27966502
H1_mix_00000662	chr1	+	2178	3	FSM	ENSG00000158156.9	ENST00000373884.6	2178	3	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	21	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTAGTCTGTGTCATCA	-29	True	NA	17	True	AATAAA	-17	NA	27959972	27968093	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_27960363_27963496_27963694_27966502
H1_mix_00000668	chr1	+	6208	15	NNC	ENSG00000204138.13	novel	6048	14	NA	NA	-30	0	intron_retention	FALSE	canonical	3	15	junction_2	26.4182412243464	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATACTATTCTGGTGTGAG	-16	True	NA	18	True	ATTAAA	-25	NA	28369679	28500364	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_28369826_28392841_28392942_28407409_28407464_28459084_28459259_28460211_28460293_28465684_28465850_28466381_28466769_28473553_28474152_28476106_28476292_28480450_28480605_28489169_28489226_28490950_28491013_28491649_28491788_28493014_28493092_28496533
H1_mix_00000670	chr1	+	6049	14	FSM	ENSG00000204138.13	ENST00000373839.8	6048	14	-1	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	15.7254551866839	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATACTATTCTGGTGTGAG	43	True	NA	18	True	ATTAAA	-25	NA	28369738	28500364	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_28369826_28407409_28407464_28459084_28459259_28460211_28460293_28465684_28465850_28466381_28466769_28473553_28474152_28476106_28476292_28480450_28480605_28489169_28489226_28490950_28491013_28491649_28491788_28493014_28493092_28496533
H1_mix_00000673	chr1	+	4961	1	FSM	ENSG00000274266.1	ENST00000364938.1	206	1	-1434	-3321	-1434	3321	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGGTTTTAGTATGTTT	NA	False	NA	24	True	AGTAAA	-17	NA	28505931	28510892	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_28505900_28510900
H1_mix_00000674	chr1	+	4378	2	FSM	ENSG00000242125.3	ENST00000437681.1	2614	2	-419	-1345	-48	86	multi-exon	FALSE	canonical	3	851	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTGCAAGGTAGAGGTG	NA	False	NA	110	True	AATGAA	-12	NA	28505931	28510978	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_28508161_28508829
H1_mix_00000676	chr1	+	2726	12	FSM	ENSG00000180198.17	ENST00000398958.6	2715	12	-11	0	-11	0	multi-exon	FALSE	canonical	3	65	junction_3	175.685152267551	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGTTTGGGTATTTCT	NA	False	NA	26	True	NA	NA	NA	28505931	28539196	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_28506085_28508127_28508161_28508829_28508906_28529857_28529940_28531802_28531991_28532170_28532351_28535049_28535147_28535257_28535381_28535870_28536027_28536261_28536382_28536746_28536900_28537831
H1_mix_00000677	chr1	+	2201	3	FSM	ENSG00000242125.3	ENST00000413987.1	2201	3	0	0	0	0	multi-exon	FALSE	canonical	3	657	junction_1	97	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGGTTTTAGTATGTTT	NA	False	NA	24	True	AGTAAA	-17	NA	28505979	28510892	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_28506085_28508127_28508161_28508829
H1_mix_00000678	chr1	+	2551	13	FSM	ENSG00000180198.17	ENST00000683442.1	2551	13	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	207.621634362981	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCACTTGTTTTCTACACA	-4	True	NA	-91	True	AATAAA	-20	NA	28506042	28538989	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_28506085_28508127_28508161_28508829_28508906_28516724_28516868_28529857_28529940_28531802_28531991_28532170_28532351_28535049_28535147_28535257_28535381_28535870_28536027_28536261_28536382_28536746_28536900_28537831
H1_mix_00000679	chr1	+	2666	10	FSM	ENSG00000180198.17	ENST00000373832.5	2424	10	-242	0	-242	0	multi-exon	FALSE	canonical	3	340	junction_1	57.2572708197692	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGGCCACTTGTTTTC	5896	False	NA	-97	True	AATAAA	-14	NA	28517893	28538983	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_28518309_28529857_28529940_28531802_28531991_28532170_28532351_28535049_28535147_28535257_28535381_28535870_28536027_28536261_28536382_28536746_28536900_28537831
H1_mix_00000680	chr1	+	2349	11	NIC	ENSG00000180198.17	novel	1577	11	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_2	151.511187705727	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGGCCACTTGTTTTC	20	True	NA	-97	True	AATAAA	-14	NA	28518261	28538983	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_28518309_28529857_28529940_28530522_28530574_28531802_28531991_28532170_28532351_28535049_28535147_28535257_28535381_28535870_28536027_28536261_28536382_28536746_28536900_28537831
H1_mix_00000684	chr1	+	6364	10	FSM	ENSG00000162419.13	ENST00000373816.6	6358	10	-6	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	11.7284080571728	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTTCATATGAAGGTTC	-1	True	NA	18	True	AATAAA	-22	NA	28668777	28719353	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_28668840_28683582_28683741_28690103_28690187_28691584_28691710_28692941_28693046_28696926_28697085_28702437_28702570_28704191_28704330_28710519_28710643_28714072
H1_mix_00000687	chr1	+	2825	6	FSM	ENSG00000198492.16	ENST00000542507.5	2825	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	484.091726845233	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCTAGTACCATTTAGTA	1	True	NA	21	True	AATAAA	-22	NA	28736620	28769774	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_28736810_28737046_28737148_28737657_28737683_28738258_28738339_28742402_28743987_28768928
H1_mix_00000688	chr1	+	2744	5	FSM	ENSG00000198492.16	ENST00000373812.8	2744	5	0	0	0	0	multi-exon	FALSE	canonical	3	1051	junction_1	95.4761095772131	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTAGTACCATTTAGTAT	-11	True	NA	22	True	AATAAA	-23	NA	28736939	28769775	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_28737148_28737657_28737683_28738258_28738339_28742402_28743987_28768928
H1_mix_00000689	chr1	+	9309	3	FSM	ENSG00000116329.12	ENST00000234961.7	9317	3	0	8	0	-8	multi-exon	FALSE	canonical	2	3	junction_2	4.5	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGCATCTCTGGCTGTT	2	True	NA	8	True	AATAAA	-18	NA	28812169	28871259	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_28812611_28858953_28859304_28862741
H1_mix_00000698	chr1	+	6322	20	NIC	ENSG00000159023.22	novel	6031	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	137	junction_12	64.5673004553284	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTCTCTGTGAGGATT	-6	True	NA	5	True	AATAAA	-13	NA	28914625	29120038	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_28914769_28987430_28987906_28993329_28993543_28997214_28997320_29011864_29011908_29015691_29015768_29018223_29018443_29030399_29030488_29033092_29033246_29035825_29035924_29039253_29039427_29053103_29053313_29060421_29060485_29064981_29065159_29096154_29096605_29097806_29097936_29109335_29109438_29112367_29112449_29115698_29115804_29116818
H1_mix_00000704	chr1	+	5591	30	FSM	ENSG00000060656.20	ENST00000373779.8	5573	30	-18	0	-12	0	multi-exon	FALSE	canonical	3	72	junction_5	46.8060739780279	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGCAGCCCTGTGTGTGT	-17	True	NA	28	True	AATAAA	-19	NA	29236503	29326800	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_29236718_29255274_29255407_29258504_29258777_29259260_29259343_29259448_29259565_29259869_29260045_29260609_29260904_29275447_29275757_29279011_29279122_29279455_29279658_29280038_29280142_29282675_29282950_29283939_29283977_29284730_29284870_29291868_29292027_29303854_29304046_29304773_29304850_29305351_29305429_29310743_29310781_29311455_29311554_29311642_29311760_29312551_29312707_29315371_29315508_29316001_29316152_29317747_29317922_29320684_29320826_29323370_29323497_29323630_29323789_29325190_29325327_29325598
H1_mix_00000705	chr1	+	5550	30	FSM	ENSG00000060656.20	ENST00000428026.6	5550	30	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_20	49.6421199320057	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTCTCACCAGCCTGA	1	True	NA	41	True	AATAAA	-32	NA	29236548	29326813	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_29236718_29255274_29255407_29258504_29258777_29259260_29259343_29259448_29259565_29259869_29260045_29260609_29260904_29275447_29275757_29279011_29279122_29279455_29279658_29280038_29280142_29282675_29282950_29283939_29283977_29284730_29284870_29291868_29292027_29303854_29304046_29304773_29304850_29305351_29305429_29310743_29310781_29311455_29311545_29311642_29311760_29312551_29312707_29315371_29315508_29316001_29316152_29317747_29317922_29320684_29320826_29323370_29323497_29323630_29323789_29325190_29325327_29325598
H1_mix_00000708	chr1	+	4732	25	NIC	ENSG00000060656.20	novel	1590	14	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_1	36.2404920481068	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGCAGCCCTGTGTGTGT	NA	False	NA	28	True	AATAAA	-19	NA	29260135	29326800	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_29260268_29260609_29260904_29275447_29275757_29279011_29279122_29279455_29279658_29280038_29280142_29282675_29282950_29283939_29283977_29284730_29284870_29291868_29292027_29303854_29304046_29304773_29304850_29305351_29305429_29310743_29310781_29311455_29311554_29311642_29311760_29312551_29312707_29315371_29315508_29316001_29316152_29317747_29317922_29320684_29320826_29323370_29323497_29323630_29323789_29325190_29325327_29325598
H1_mix_00000709	chr1	+	3595	18	ISM	ENSG00000060656.20	ENST00000428026.6	5550	30	47095	13	-79	0	3prime_fragment	FALSE	canonical	3	67	junction_8	37.291426883818	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGCAGCCCTGTGTGTGT	NA	False	NA	28	True	AATAAA	-19	NA	29283643	29326800	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_29283977_29284730_29284870_29291868_29292027_29303854_29304046_29304773_29304850_29305351_29305429_29310743_29310781_29311455_29311545_29311642_29311760_29312551_29312707_29315371_29315508_29316001_29316152_29317747_29317922_29320684_29320826_29323370_29323497_29323630_29323789_29325190_29325327_29325598
H1_mix_00000710	chr1	+	3456	18	ISM	ENSG00000060656.20	ENST00000373779.8	5573	30	47270	0	69	0	3prime_fragment	FALSE	canonical	3	127	junction_8	27.2866369058779	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGCAGCCCTGTGTGTGT	63	False	NA	28	True	AATAAA	-19	NA	29283791	29326800	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_29283977_29284730_29284870_29291868_29292027_29303854_29304046_29304773_29304850_29305351_29305429_29310743_29310781_29311455_29311554_29311642_29311760_29312551_29312707_29315371_29315508_29316001_29316152_29317747_29317922_29320684_29320826_29323370_29323497_29323630_29323789_29325190_29325327_29325598
H1_mix_00000714	chr1	+	1489	7	FSM	ENSG00000121766.16	ENST00000618216.4	1489	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_6	236.603512700514	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATAATCCTTCTTCCTGG	0	True	NA	49	True	ACTAAA	-40	NA	31296981	31364953	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_31297076_31310043_31310165_31319108_31319167_31337174_31337276_31338956_31339049_31346639_31346741_31364031
H1_mix_00000716	chr1	+	2587	8	FSM	ENSG00000121766.16	ENST00000344147.10	1568	8	-50	-969	0	952	multi-exon	FALSE	canonical	3	558	junction_1	57.2224445761041	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGAGTGCAAACTGCAGTG	0	True	NA	NA	False	NA	NA	NA	31296981	31365905	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_31297076_31310043_31310165_31319108_31319167_31337174_31337276_31338956_31339049_31346639_31346741_31348828_31348975_31364031
H1_mix_00000719	chr1	+	2535	11	FSM	ENSG00000121774.18	ENST00000484270.2	1989	11	-546	0	-232	0	multi-exon	FALSE	canonical	3	24	junction_10	802.424700517126	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGGTCCCACTCTGGTA	NA	False	NA	16	True	AATAAA	-16	NA	32013635	32060850	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32014378_32030297_32030423_32031523_32031641_32033187_32033335_32036909_32037044_32037834_32038037_32038551_32038620_32039514_32039574_32042526_32042720_32045330_32045391_32060162
H1_mix_00000730	chr1	+	2012	5	FSM	ENSG00000160051.12	ENST00000291358.11	2012	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	3.93700393700591	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGAGTCTGGCTGCTTTC	12	True	NA	12	True	AATAAA	-14	NA	32205670	32208682	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32205724_32206153_32206298_32206508_32206762_32207001_32207121_32207239
H1_mix_00000732	chr1	+	1665	10	FSM	ENSG00000084623.12	ENST00000677183.1	1652	10	-13	0	0	0	multi-exon	FALSE	canonical	3	929	junction_1	236.884771696554	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAAGAAATAAATTGGTTT	1	True	NA	-13	True	NA	NA	NA	32222404	32231558	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32222445_32222537_32222631_32224033_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
H1_mix_00000733	chr1	+	1418	11	FSM	ENSG00000084623.12	ENST00000677378.1	1416	11	-2	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	486.799640509317	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGGTGTCTGTTTC	1	True	NA	31	True	AATAAA	-32	NA	32222404	32231602	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32222445_32222540_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
H1_mix_00000734	chr1	+	1276	11	FSM	ENSG00000084623.12	ENST00000678689.1	1276	11	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_10	494.944895922768	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGGTGTCTGTTTC	1	True	NA	31	True	AATAAA	-32	NA	32222404	32231602	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231259
H1_mix_00000735	chr1	+	1143	9	FSM	ENSG00000084623.12	ENST00000677640.1	1141	9	-2	0	0	0	multi-exon	FALSE	canonical	3	134	junction_4	527.063800692098	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGGTGTCTGTTTC	1	True	NA	31	True	AATAAA	-32	NA	32222404	32231602	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
H1_mix_00000736	chr1	+	1273	10	FSM	ENSG00000084623.12	ENST00000677353.1	1250	10	-23	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	532.259288897135	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGGTGTCTGTTTCAT	1	True	NA	33	True	AATAAA	-34	NA	32222404	32231604	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
H1_mix_00000737	chr1	+	1258	10	FSM	ENSG00000084623.12	ENST00000678968.1	1256	10	-2	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	534.424393248255	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGGTGTCTGTTTCAT	1	True	NA	33	True	AATAAA	-34	NA	32222404	32231604	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226284_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
H1_mix_00000738	chr1	+	2675	11	FSM	ENSG00000084623.12	ENST00000678711.1	2660	11	-15	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	499.742543716262	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATTGTAAGCCCTTCTG	1	True	NA	NA	False	AATAAA	-14	NA	32222404	32236165	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32234423
H1_mix_00000739	chr1	+	1486	10	FSM	ENSG00000084623.12	ENST00000471486.6	1482	10	-4	0	0	0	multi-exon	FALSE	canonical	3	1346	junction_6	148.507222254436	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGGTGTCTGTTTC	12	False	NA	31	True	AATAAA	-32	NA	32222432	32231602	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
H1_mix_00000740	chr1	+	1807	5	FSM	ENSG00000084623.12	ENST00000678306.1	1795	5	-12	0	-12	0	multi-exon	FALSE	canonical	3	1346	junction_1	163.721371543241	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGGAGGCTGAGGCAGGA	847	False	NA	NA	False	AATACA	-44	NA	32227325	32231380	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
H1_mix_00000743	chr1	+	2409	7	FSM	ENSG00000116478.12	ENST00000476391.5	2409	7	0	0	0	0	multi-exon	FALSE	canonical	3	1133	junction_2	45.7362608392461	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTTTCCTATGTGTCCC	6732	False	NA	34	True	AATAAA	-26	NA	32329479	32333635	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32330687_32330767_32330909_32331473_32331583_32331675_32331807_32332089_32332243_32332700_32332750_32333016
H1_mix_00000751	chr1	+	1417	12	FSM	ENSG00000162521.19	ENST00000373485.5	1417	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_11	591.445071606208	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGATGGGTTTTATTTA	25	True	NA	30	True	AATAAA	-21	NA	32651233	32680657	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32651323_32651913_32652062_32657426_32657573_32668224_32668399_32668738_32668855_32668971_32669133_32669230_32669358_32669485_32669564_32672449_32672527_32672641_32672700_32672790_32672902_32680525
H1_mix_00000753	chr1	+	5493	7	FSM	ENSG00000162522.11	ENST00000401073.7	5493	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	29.6235641939918	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGCTACTGCTTCTTA	4	True	NA	14	True	ATTAAA	-14	NA	32741829	32774970	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32742190_32767786_32767958_32768061_32768118_32768651_32768776_32769672_32769787_32769879_32772442_32772864
H1_mix_00000754	chr1	+	5339	7	FSM	ENSG00000162522.11	ENST00000373481.7	5293	7	-46	0	-44	0	multi-exon	FALSE	canonical	3	51	junction_4	15.0517625398342	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGCTACTGCTTCTTA	-5	True	NA	14	True	ATTAAA	-14	NA	32753974	32774970	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32754181_32767786_32767958_32768061_32768118_32768651_32768776_32769672_32769787_32769879_32772442_32772864
H1_mix_00000755	chr1	+	5762	6	ISM	ENSG00000162522.11	ENST00000373481.7	5293	7	-46	0	-44	0	intron_retention	FALSE	canonical	3	51	junction_4	12.7530388535439	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGCTACTGCTTCTTA	-5	True	NA	14	True	ATTAAA	-14	NA	32753974	32774970	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_32754181_32767786_32767958_32768061_32768118_32768651_32768776_32769672_32769787_32769879
H1_mix_00000756	chr1	+	5249	8	NNC	ENSG00000162522.11	novel	5293	7	NA	NA	-64	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_6	26.2779491636029	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGCTACTGCTTCTTA	NA	False	NA	14	True	ATTAAA	-14	NA	32753954	32774970	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_32754181_32767786_32767958_32768061_32768118_32768651_32768776_32769672_32769787_32769879_32770111_32770220_32772442_32772864
H1_mix_00000757	chr1	+	684	4	FSM	ENSG00000162522.11	ENST00000468130.1	684	4	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	7.40870359029762	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGAGTTAGAAAATCTTG	10	True	NA	58	True	TATAAA	-5	NA	32754018	32768946	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32754181_32767786_32767958_32768061_32768118_32768651
H1_mix_00000758	chr1	+	5309	7	FSM	ENSG00000162522.11	ENST00000373480.1	5294	7	-15	0	-15	0	multi-exon	FALSE	canonical	3	12	junction_1	27.7108081601546	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGCTACTGCTTCTTA	21	False	NA	14	True	ATTAAA	-14	NA	32765651	32774970	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32765828_32767786_32767958_32768061_32768118_32768651_32768776_32769672_32769787_32769879_32772442_32772864
H1_mix_00000761	chr1	+	4370	7	FSM	ENSG00000116497.18	ENST00000373475.10	4220	7	-150	0	-54	0	multi-exon	TRUE	canonical	3	195	junction_3	57.5403240248861	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATGTACTGTGGCGGTCT	560	False	NA	20	True	AATAAA	-17	NA	32817502	32858875	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32817690_32825312_32825430_32826097_32826931_32827992_32828082_32829963_32830068_32853078_32853167_32855923
H1_mix_00000762	chr1	+	4329	7	NIC	ENSG00000116497.18	novel	706	3	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_1	101.063786238637	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATGTACTGTGGCGGTCT	48	False	NA	20	True	AATAAA	-17	NA	32817700	32858875	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_32817847_32825312_32825430_32826097_32826931_32827992_32828082_32829963_32830068_32853078_32853167_32855923
H1_mix_00000763	chr1	+	1620	8	NIC	ENSG00000116497.18	novel	706	3	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_6	139.162509612441	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCCATTGCCGACTTGAA	95	False	NA	19	True	TTTAAA	-21	NA	32817747	32856185	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_32817847_32825312_32825430_32826097_32826931_32827992_32828082_32829963_32830068_32834033_32834062_32853078_32853167_32855923
H1_mix_00000767	chr1	+	3187	9	FSM	ENSG00000160094.15	ENST00000539719.6	3187	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	36.6092116140187	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCGGTGGTGTTTGGCGT	-34	True	NA	17	True	AATAAA	-17	NA	33256491	33300719	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_33256655_33270486_33270613_33276099_33276164_33276347_33276595_33280123_33280458_33281586_33281812_33294936_33295016_33295146_33295306_33298929
H1_mix_00000771	chr1	+	3064	7	FSM	ENSG00000142698.15	ENST00000488417.2	3050	7	-14	0	-14	0	multi-exon	TRUE	canonical	3	5	junction_1	11.130538571376	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTGTGCCTGTTTATTT	9869	False	NA	8	True	GATAAA	-19	NA	34176892	34219131	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_34178110_34197224_34197914_34200771_34201033_34202083_34202260_34208156_34208235_34212209_34212407_34218685
H1_mix_00000776	chr1	+	952	6	ISM	ENSG00000197056.11	ENST00000359858.9	4161	10	12	11065	6	-6983	5prime_fragment	FALSE	canonical	3	52	junction_1	34.9433827784317	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATTAACTGGCCTATGAA	3	True	NA	NA	False	AATAAA	-15	NA	35079396	35104794	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_35079443_35093913_35094084_35095818_35095892_35097316_35097567_35104294_35104470_35104556
H1_mix_00000777	chr1	+	4264	11	NIC	ENSG00000197056.11	novel	4203	11	NA	NA	7	-1	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	39.7914563694268	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAATGTTTTGATCTTTC	4	True	NA	10	True	ATTAAA	-15	NA	35079397	35115853	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_35079443_35093319_35093442_35093913_35094084_35095818_35095892_35097316_35097567_35104294_35104470_35104556_35104770_35110293_35110448_35111771_35111913_35112086_35112131_35112976
H1_mix_00000780	chr1	+	7001	31	NNC	ENSG00000146463.12	novel	7366	30	NA	NA	5	-119	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_26	93.7811933290584	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGGGTGAGTTCTTCT	9	True	NA	5	True	AATAAA	-15	NA	35269037	35421939	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_35269086_35295926_35295989_35325359_35325406_35358924_35359447_35361193_35361256_35361618_35361790_35370028_35370114_35370371_35370628_35381258_35381434_35381545_35381759_35385441_35385593_35386073_35386190_35387002_35387279_35387453_35387605_35388909_35389083_35389947_35390099_35392211_35392353_35392646_35392685_35393594_35393740_35396551_35396671_35397376_35397546_35398412_35398467_35398863_35399044_35399481_35399577_35405022_35405195_35405372_35405469_35407986_35408160_35413971_35414084_35415465_35415715_35418442_35418573_35419469
H1_mix_00000782	chr1	+	2048	3	FSM	ENSG00000146463.12	ENST00000482131.1	640	3	0	-1408	0	1408	multi-exon	FALSE	canonical	3	299	junction_1	28.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGAGTTATGTTGTCATT	NA	False	NA	NA	False	TATAAA	-21	NA	35361716	35372261	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_35361790_35370028_35370114_35370371
H1_mix_00000783	chr1	+	7666	12	ISM	ENSG00000146463.12	ENST00000457946.1	6003	24	32454	-1156	1479	1156	3prime_fragment	FALSE	canonical	3	217	junction_2	27.3078561638306	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTCTGAATTTTTACT	NA	False	NA	6	True	AATAAA	-15	NA	35394158	35423214	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_35396671_35397376_35397546_35398412_35398467_35398863_35399044_35399481_35399577_35405022_35405195_35405372_35405469_35408007_35408160_35413971_35414084_35415465_35415715_35418442_35418573_35419469
H1_mix_00000788	chr1	+	3856	8	NIC	ENSG00000020129.16	novel	3433	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	68.7203739506587	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGCGTGGTCTGCCC	16	True	NA	20	True	AATAAA	-20	NA	35557830	35566779	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_35557884_35558155_35558686_35559106_35559248_35560325_35561295_35562391_35562634_35563201_35563427_35563766_35563910_35565226
H1_mix_00000793	chr1	+	13722	19	FSM	ENSG00000092847.13	ENST00000373204.6	13712	19	-10	0	-10	0	multi-exon	FALSE	canonical	3	61	junction_8	11.7779088043026	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTCGATCTGATGTTTGT	-7	True	NA	9	True	ATTAAA	-19	NA	35883198	35930532	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_35883447_35888426_35888611_35892556_35892678_35893096_35893279_35893673_35893811_35894036_35894172_35894314_35894403_35895121_35895270_35901473_35901594_35901947_35902071_35902203_35902338_35906934_35907120_35913841_35914002_35914183_35914275_35915347_35915543_35917592_35917728_35918321_35918424_35919054_35919255_35919498
H1_mix_00000795	chr1	+	19683	19	FSM	ENSG00000126070.20	ENST00000373191.9	19660	19	-23	0	0	0	multi-exon	FALSE	canonical	3	26	junction_6	25.5701045542168	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTCTTGTGTGGTCATC	-31	True	NA	NA	False	AATAAA	-22	NA	35931081	36072500	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_35931446_35945691_35945864_35966954_35967076_35972023_35972233_35973374_35973512_36004340_36004476_36008689_36008778_36008896_36009045_36009474_36009595_36013629_36013753_36013914_36014049_36027113_36027299_36034173_36034334_36036176_36036268_36039789_36039985_36040306_36040442_36043446_36043549_36054945_36055146_36055636
H1_mix_00000796	chr1	+	5965	7	NIC	ENSG00000126070.20	novel	1035	6	NA	NA	0	5930	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	32.1143789186921	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTAAGACTCAAAATTTTT	-31	True	NA	7	True	ATTAAA	-18	NA	35931081	35989339	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_35931446_35945691_35945864_35966954_35967076_35972023_35972233_35973374_35973512_35982620_35982713_35984469
H1_mix_00000804	chr1	+	3238	18	FSM	ENSG00000116871.16	ENST00000373150.8	3238	18	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_7	72.3162508597363	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCCTGTTCTTGGAGCT	39	True	NA	15	True	AATAAA	-16	NA	36156197	36180849	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_36156464_36170970_36171316_36171512_36171582_36172463_36172628_36173363_36173479_36174897_36175009_36176198_36176322_36176417_36176582_36176696_36176843_36177872_36178202_36178418_36178597_36178684_36178824_36178920_36179026_36179261_36179316_36179514_36179558_36179665_36179757_36179873_36180068_36180247
H1_mix_00000805	chr1	+	3328	17	FSM	ENSG00000116871.16	ENST00000373151.6	3324	17	-4	0	0	0	multi-exon	FALSE	canonical	3	23	junction_13	101.110069200599	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCAATCCTGCCTGTT	39	True	NA	6	True	AATAAA	-7	NA	36156197	36180840	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_36156464_36170970_36171316_36171512_36171582_36172463_36172628_36173363_36173479_36174897_36175009_36176198_36176582_36176696_36176843_36177872_36178202_36178418_36178597_36178684_36178824_36178920_36179026_36179261_36179316_36179511_36179558_36179665_36179757_36179873_36180068_36180247
H1_mix_00000808	chr1	+	4426	12	FSM	ENSG00000054118.15	ENST00000354618.10	4405	12	-21	0	-10	0	multi-exon	FALSE	canonical	0	0	junction_4	161.828396000412	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTTCTGTTCATTGTCAT	-29	True	NA	20	True	AATAAA	-24	NA	36224421	36305357	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_36224506_36259381_36259485_36282532_36282701_36286367_36287271_36289059_36289765_36291373_36291547_36292597_36292710_36293850_36293936_36296582_36296771_36300885_36301085_36301552_36301697_36303795
H1_mix_00000809	chr1	+	4402	12	NNC	ENSG00000054118.15	novel	4405	12	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	173.626177711706	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTTCTGTTCATTGTCAT	-8	True	NA	20	True	AATAAA	-24	NA	36224442	36305357	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_36224506_36259381_36259485_36282532_36282701_36286367_36287271_36289059_36289765_36291373_36291547_36292597_36292710_36293850_36293936_36296582_36296771_36300885_36301085_36301555_36301697_36303795
H1_mix_00000810	chr1	+	2548	16	FSM	ENSG00000214193.11	ENST00000453908.8	2544	16	-4	0	-4	0	multi-exon	FALSE	canonical	0	0	junction_12	6.05530070819498	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGCCTGCGCGCGGCTA	2	True	NA	25	True	NA	NA	NA	36306363	36321347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_36306425_36306597_36306756_36306841_36306906_36307166_36307286_36307516_36307608_36307769_36307826_36307917_36307964_36308108_36308210_36308388_36308476_36309547_36309591_36319070_36319165_36319259_36319313_36319441_36319537_36319674_36320799_36320914_36320979_36321055
H1_mix_00000811	chr1	+	2720	6	FSM	ENSG00000163874.11	ENST00000373087.7	2654	6	-83	17	-83	0	multi-exon	FALSE	canonical	3	21	junction_1	9.91160935469109	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTGAGCCCTTTCAAGAG	NA	False	NA	17	True	AATAAA	-9	NA	37474496	37484360	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_37474630_37475458_37475940_37480289_37480430_37481600_37481836_37482433_37482541_37482736
H1_mix_00000814	chr1	+	785	2	FSM	ENSG00000163879.11	ENST00000490312.1	712	2	-37	-36	-3	36	multi-exon	FALSE	canonical	3	184	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCGTCACATTCTTTTGG	-26	True	NA	NA	False	NA	NA	NA	37556915	37558227	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_37557076_37557602
H1_mix_00000816	chr1	+	511	4	FSM	ENSG00000163879.11	ENST00000466723.1	511	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	82.3825763671475	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAGAAGCACAATGAGGA	6	True	NA	NA	False	NA	NA	NA	37556997	37562188	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_37557076_37557602_37557749_37561556_37561736_37562080
H1_mix_00000817	chr1	+	3539	2	FSM	ENSG00000163879.11	ENST00000497858.1	3539	2	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTTTTGTCTGAATTTT	3520	False	NA	19	True	AATAAA	-16	NA	37560537	37566856	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_37562246_37565025
H1_mix_00000819	chr1	+	2371	10	FSM	ENSG00000134690.11	ENST00000373055.6	2371	10	0	0	0	0	multi-exon	TRUE	canonical	3	392	junction_6	29.8812464413533	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGTTCATCCTGCCTGT	-20	True	NA	38	True	AATAAA	-27	NA	37692515	37709719	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_37692785_37692904_37693034_37695909_37695951_37698904_37698978_37700435_37700522_37701753_37701819_37703251_37703348_37705440_37705568_37706977_37707065_37708321
H1_mix_00000825	chr1	+	782	3	FSM	ENSG00000197982.14	ENST00000373042.5	1329	3	542	5	542	0	multi-exon	FALSE	canonical	3	217	junction_1	254.5	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCTGGTGACCGACGTT	8	False	NA	24	True	ATTAAA	-15	NA	37808331	37809449	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_37808440_37808530_37808733_37808977
H1_mix_00000827	chr1	+	938	7	NIC	ENSG00000183520.12	novel	2023	8	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	354.815170977166	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTTTTTGGATTGTGAA	7	True	NA	26	True	ATTAAA	-17	NA	38012737	38023801	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_38012866_38017667_38017771_38018463_38018578_38019058_38019153_38019252_38019384_38022698_38022810_38023544
H1_mix_00000828	chr1	+	1895	6	FSM	ENSG00000183520.12	ENST00000488453.1	1895	6	0	0	0	0	multi-exon	FALSE	canonical	3	864	junction_2	66.1011346347398	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTTTTTGGATTGTGAA	3805	False	NA	26	True	ATTAAA	-17	NA	38016582	38023801	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_38017771_38018463_38018578_38019058_38019153_38019252_38019384_38022698_38022810_38023544
H1_mix_00000832	chr1	+	2688	5	FSM	ENSG00000174574.16	ENST00000432648.8	2688	5	0	0	0	0	multi-exon	FALSE	canonical	3	2739	junction_1	54.4902514216993	297	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAAGGGTGATTTGTTTC	-1	True	NA	50	True	ATTAAA	-19	NA	38991275	39006059	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_38991601_38998170_38998312_39000971_39001107_39003346_39003419_39004044
H1_mix_00000841	chr1	+	12895	58	NIC	ENSG00000127603.32	novel	19141	64	NA	NA	-1682	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	127.86241980937	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGTATTTCCTGATTTT	28	False	NA	NA	False	ATTAAA	-20	NA	39347162	39486986	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_39347211_39349477_39349628_39350784_39351019_39353006_39353232_39357374_39357894_39358696_39358874_39359140_39359265_39360792_39361002_39361359_39361678_39368147_39368315_39370029_39370187_39372478_39372597_39378460_39378524_39379202_39379445_39380243_39380374_39381952_39382153_39385433_39385930_39387186_39388659_39422373_39422536_39422729_39422901_39424027_39424195_39427454_39427615_39427960_39428288_39429241_39429327_39429826_39430069_39430701_39430909_39432534_39432655_39433047_39433156_39434413_39434633_39435557_39435762_39437776_39438009_39439273_39439501_39441002_39441126_39441223_39441326_39441951_39442054_39442146_39442321_39442411_39442568_39442713_39442912_39443445_39443575_39444661_39444836_39447431_39447588_39447691_39447899_39448032_39448153_39448593_39448764_39451051_39451212_39452155_39452351_39452683_39452813_39453706_39453851_39454908_39455098_39458369_39458491_39459085_39459250_39460631_39460795_39461882_39462038_39463611_39463687_39468614_39468733_39479797_39480010_39484600_39484731_39485537
H1_mix_00000842	chr1	+	13316	41	NIC	ENSG00000127603.32	novel	7104	41	NA	NA	-495	-1	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	94.6894892530317	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGTATTTCCTGATTTT	29	False	NA	NA	False	ATTAAA	-20	NA	39409007	39486986	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_39414478_39422373_39422536_39422729_39422901_39424027_39424195_39427454_39427615_39427960_39428288_39429241_39429327_39429826_39430069_39430701_39430909_39432534_39432655_39433047_39433156_39434413_39434633_39435557_39435762_39437776_39438009_39439273_39439501_39441002_39441126_39441223_39441326_39441951_39442054_39442146_39442321_39442411_39442568_39442713_39442912_39443445_39443575_39444661_39444836_39447431_39447588_39447691_39447899_39448032_39448153_39448593_39448764_39451051_39451212_39452155_39452351_39452683_39452813_39453706_39453851_39454908_39455098_39458369_39458491_39459085_39459250_39460631_39460795_39461882_39462038_39463611_39463687_39468614_39468733_39479797_39480010_39484600_39484731_39485537
H1_mix_00000847	chr1	+	1266	10	NIC	ENSG00000084072.17	novel	1213	10	NA	NA	4	0	combination_of_known_junctions	TRUE	canonical	3	94	junction_1	214.283532028865	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTGGGAGTTGTCAGAG	11	True	NA	30	True	AATAAA	-30	NA	39738893	39753716	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_39738924_39740164_39740264_39741365_39741410_39741894_39741922_39743215_39743298_39743823_39743925_39745374_39745499_39748902_39749089_39752909_39753053_39753286
H1_mix_00000852	chr1	+	2971	13	FSM	ENSG00000131236.18	ENST00000372802.5	2964	13	-7	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	698.658178224516	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATGCAACTTTTTTTT	-6	True	NA	NA	False	NA	NA	NA	40040232	40072515	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_40040784_40059333_40059459_40060069_40060171_40061734_40061813_40064226_40064371_40064473_40064560_40066214_40066321_40067539_40067718_40069689_40069875_40070158_40070283_40070429_40070513_40070835_40070980_40071449
H1_mix_00000855	chr1	+	2765	13	FSM	ENSG00000131236.18	ENST00000372805.8	2626	13	-146	7	0	0	multi-exon	FALSE	canonical	3	1122	junction_1	288.61229280049	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGCTTAGTTGTTTAC	344	False	NA	19	True	AATAAA	-10	NA	40040582	40072641	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_40040802_40059336_40059459_40060066_40060171_40061734_40061813_40064226_40064371_40064473_40064560_40066214_40066321_40067539_40067718_40069689_40069875_40070158_40070283_40070429_40070513_40070835_40070980_40071449
H1_mix_00000858	chr1	+	2616	13	FSM	ENSG00000131236.18	ENST00000340450.7	2592	13	-24	0	0	0	multi-exon	FALSE	canonical	3	272	junction_2	549.491349391012	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGCTTAGTTGTTTAC	-23	True	NA	19	True	AATAAA	-10	NA	40040728	40072641	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_40040802_40059336_40059459_40060069_40060171_40061734_40061813_40064226_40064371_40064473_40064560_40066214_40066321_40067539_40067718_40069689_40069875_40070158_40070283_40070429_40070513_40070835_40070980_40071449
H1_mix_00000859	chr1	+	2679	13	NIC	ENSG00000131236.18	novel	3105	13	NA	NA	-66	0	combination_of_known_junctions	FALSE	canonical	3	151	junction_1	542.32710378516	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGCTTAGTTGTTTAC	12	False	NA	19	True	AATAAA	-10	NA	40040653	40072641	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_40040784_40059333_40059459_40060066_40060171_40061734_40061813_40064226_40064371_40064473_40064560_40066214_40066321_40067539_40067718_40069689_40069875_40070158_40070283_40070429_40070513_40070835_40070980_40071449
H1_mix_00000860	chr1	+	3146	13	FSM	ENSG00000131236.18	ENST00000372792.7	2629	13	-524	7	-28	0	multi-exon	FALSE	canonical	3	368	junction_1	484.257650659463	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGCTTAGTTGTTTAC	4934	False	NA	19	True	AATAAA	-10	NA	40040204	40072641	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_40040802_40059333_40059459_40060066_40060171_40061734_40061813_40064226_40064371_40064473_40064560_40066214_40066321_40067539_40067718_40069689_40069875_40070158_40070283_40070429_40070513_40070835_40070980_40071449
H1_mix_00000864	chr1	+	3113	10	FSM	ENSG00000084073.10	ENST00000372759.4	2975	10	-145	7	0	0	multi-exon	FALSE	canonical	3	745	junction_9	53.8855669079175	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTATGTACTTTGTCTT	40	False	NA	13	True	ATTAAA	-13	NA	40258090	40294173	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_40258395_40260838_40260986_40267785_40267873_40268418_40268536_40269974_40270128_40271893_40272036_40281342_40281528_40285924_40286030_40290853_40290998_40292444
H1_mix_00000866	chr1	+	540	4	FSM	ENSG00000084073.10	ENST00000472583.1	537	4	-3	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	417.181814880115	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGGTTATGCTGGCTT	-1	True	NA	NA	False	NA	NA	NA	40258235	40267836	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_40258395_40259349_40259533_40260838_40260986_40267785
H1_mix_00000867	chr1	+	2927	10	FSM	ENSG00000084070.12	ENST00000372718.8	2905	10	-22	0	-22	0	multi-exon	FALSE	canonical	3	83	junction_5	15.7087692738408	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGTTTGCTTGGCCATT	-33	True	NA	9	True	AATAAA	-13	NA	40373704	40423322	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_40374224_40406735_40406870_40408652_40408739_40409756_40409836_40413015_40413103_40414158_40414241_40415271_40415382_40416175_40416342_40416779_40417097_40421975
H1_mix_00000868	chr1	+	2488	10	FSM	ENSG00000084070.12	ENST00000372708.5	2473	10	-15	0	-15	0	multi-exon	FALSE	canonical	1	1	junction_1	34.5332189330294	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTTGGCCATTACTG	-2	True	NA	13	True	AATAAA	-17	NA	40374632	40423326	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_40374709_40406735_40406870_40408652_40408739_40409756_40409836_40413015_40413103_40414158_40414241_40415271_40415382_40416175_40416342_40416779_40417097_40421975
H1_mix_00000869	chr1	+	1974	5	NNC	ENSG00000187801.15	novel	2109	6	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	13.3486890742125	493	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCCAAAAACGAACATTAAAA	-15	True	NA	-23	True	NA	NA	NA	40450079	40463680	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_40450138_40450655_40451089_40456944_40457072_40457343_40457440_40462420
H1_mix_00000870	chr1	+	5330	6	FSM	ENSG00000260920.2_ENSG00000187801.15	ENST00000411995.6	2109	6	-43	-3178	-38	129	multi-exon	FALSE	canonical	3	22	junction_2	4.54312667664022	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTGGTTGTTTTTGT	-31	True	NA	22	True	GATAAA	-19	NA	40450063	40466896	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_40450176_40450655_40451089_40454202_40454289_40456944_40457072_40457343_40457440_40462420
H1_mix_00000873	chr1	+	2707	6	NNC	ENSG00000187815.10	novel	2796	6	NA	NA	50	-4	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	6.33719180710194	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCATAACAGTTTTTTTC	52	False	NA	24	True	ATTAAA	-40	NA	40477339	40496284	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_40477895_40479015_40479489_40481762_40481855_40489087_40489215_40489528_40489625_40494920
H1_mix_00000874	chr1	+	1694	2	FSM	ENSG00000164002.12	ENST00000420209.2	1677	2	-17	0	-4	0	multi-exon	FALSE	canonical	2	10	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGAACTGATGGTTT	-4	True	NA	9	True	AATAAA	-17	NA	40508736	40516036	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_40508909_40514514
H1_mix_00000880	chr1	+	670	5	FSM	ENSG00000117010.17	ENST00000372697.7	1028	5	0	358	0	-358	multi-exon	FALSE	canonical	2	12	junction_4	16.9926454679664	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGTATGAAACATTTCTTC	16	True	NA	NA	False	AATAAA	-21	NA	40531662	40544679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_40531788_40533142_40533182_40540585_40540713_40541614_40541711_40544396
H1_mix_00000883	chr1	+	2312	10	NIC	ENSG00000066136.21	novel	1955	10	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_9	72.6265604579386	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGAGTCTGGGTTTCTGT	-1	True	NA	24	True	AATAAA	-16	NA	40691658	40771603	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_40691868_40738835_40738949_40747533_40747606_40749572_40749687_40753150_40753247_40758120_40758295_40762887_40763047_40766595_40766704_40769355_40769416_40770396
H1_mix_00000884	chr1	+	2385	10	FSM	ENSG00000066136.21	ENST00000372652.5	2363	10	-22	0	-22	0	multi-exon	FALSE	canonical	3	53	junction_9	92.0962995731193	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGAGTCTGGGTTTCTGT	-11	True	NA	24	True	AATAAA	-16	NA	40709334	40771603	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_40709617_40738835_40738949_40747533_40747606_40749572_40749687_40753150_40753247_40758120_40758295_40762887_40763047_40766595_40766704_40769355_40769416_40770396
H1_mix_00000890	chr1	+	4025	18	FSM	ENSG00000171793.16	ENST00000648801.1	4009	18	-16	0	0	0	multi-exon	FALSE	canonical	3	459	junction_10	24.571905638611	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTAGCAATAGGCATAGCT	48	False	NA	NA	False	NA	NA	NA	40979740	41012470	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_40979830_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41007448_41007546_41008658_41008715_41008793_41008891_41009444_41009590_41010160_41010255_41011657
H1_mix_00000891	chr1	+	2878	18	FSM	ENSG00000171793.16	ENST00000498694.2	2855	18	-23	0	0	0	multi-exon	FALSE	canonical	3	459	junction_11	25.5088016562463	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAAGGCAGAACAAGAGAC	25	True	NA	NA	False	AATAAA	-3	NA	40979717	41012546	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_40979830_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41007448_41007546_41008658_41008891_41009444_41009590_41010160_41010255_41011657
H1_mix_00000895	chr1	+	1023	3	FSM	ENSG00000127125.9	ENST00000372556.3	984	3	-41	2	-19	0	multi-exon	FALSE	canonical	3	146	junction_1	236.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGTTTTGTTTTGTTTGA	417	False	NA	38	True	AATAAA	-31	NA	42456519	42460412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_42456629_42457246_42457351_42459602
H1_mix_00000896	chr1	+	2286	3	FSM	ENSG00000127125.9	ENST00000372561.4	2269	3	-23	6	-19	-6	multi-exon	FALSE	canonical	3	506	junction_1	56.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGAAATTCTAAGACTGAAA	417	False	NA	5	True	AATAAA	-20	NA	42456519	42461230	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_42457074_42457246_42457351_42459602
H1_mix_00000899	chr1	+	654	3	NNC	ENSG00000186409.18	novel	685	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGGCTATCACTGTATA	18	True	NA	5	True	ATTAAA	-20	NA	42463328	42473385	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_42463658_42463837_42463899_42473121
H1_mix_00000902	chr1	+	1049	10	FSM	ENSG00000171960.12	ENST00000678333.1	1036	10	-13	0	0	0	multi-exon	FALSE	canonical	3	8	junction_9	126.155107352462	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATCCCTGTAATCCCAGC	-6	True	NA	NA	False	NA	NA	NA	42658422	42676202	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_42658513_42658843_42658909_42659227_42659252_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350_42667441_42675732
H1_mix_00000903	chr1	+	796	10	FSM	ENSG00000171960.12	ENST00000304979.8	754	10	-87	45	1	0	multi-exon	TRUE	canonical	3	357	junction_9	32.540952356176	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTAAGTTTTCAACTG	NA	False	NA	-15	True	NA	NA	NA	42658335	42676713	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_42658513_42658843_42658909_42659227_42659252_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350_42667441_42676583
H1_mix_00000905	chr1	+	990	9	FSM	ENSG00000171960.12	ENST00000677356.1	806	9	-184	0	5	0	multi-exon	FALSE	canonical	3	357	junction_8	32.4381623246447	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTTTTTTTTCTTTTGG	88	False	NA	29	True	AATAAA	-17	NA	42658516	42676757	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_42658909_42659227_42659252_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350_42667441_42676583
H1_mix_00000907	chr1	+	798	5	FSM	ENSG00000065978.19	ENST00000332220.10	776	5	-22	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	1300.73467221413	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGGTCCACGTAAACATG	5	True	NA	NA	False	NA	NA	NA	42682417	42697262	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_42682732_42683402_42683467_42693489_42693524_42696641_42696945_42697179
H1_mix_00000909	chr1	+	1524	7	FSM	ENSG00000065978.19	ENST00000436427.1	1524	7	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	1239.76755213763	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTGTGTAAATTTGTC	-10	True	NA	-6	True	AATAAA	-14	NA	42682986	42702349	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_42683366_42693489_42693524_42696198_42696289_42696641_42696945_42697179_42697263_42700780_42701047_42701980
H1_mix_00000914	chr1	+	1693	3	FSM	ENSG00000164011.18	ENST00000372507.5	1683	3	-14	4	-1	0	multi-exon	FALSE	canonical	3	26	junction_2	12.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGACCCGTGTACTTAT	-2	True	NA	NA	False	AGTAAA	-12	NA	42846611	42852473	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_42846658_42849290_42849414_42850949
H1_mix_00000915	chr1	+	1874	4	FSM	ENSG00000164011.18	ENST00000651192.1	1874	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	14.0554457615387	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCCGTGTACTTATTTGG	-1	True	NA	NA	False	AGTAAA	-16	NA	42846612	42852477	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_42846658_42849290_42849414_42849564_42849743_42850949
H1_mix_00000920	chr1	+	491	4	FSM	ENSG00000186973.11	ENST00000410025.5	530	4	0	39	0	-39	multi-exon	FALSE	canonical	0	0	junction_1	2.94392028877595	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCACAGCCCAGAGAAATAA	0	True	NA	NA	False	NA	NA	NA	43147916	43156357	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43148092_43150760_43150821_43152827_43152932_43156205
H1_mix_00000921	chr1	+	1694	3	ISM	ENSG00000179178.11	ENST00000432792.6	1850	4	656	0	-265	0	3prime_fragment	FALSE	canonical	3	153	junction_1	20.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGGATCTCACCTCAGA	-15	True	NA	28	True	AATAAA	-29	NA	43270680	43274002	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_43270794_43272183_43272340_43272577
H1_mix_00000922	chr1	+	2070	4	NNC	ENSG00000179178.11	novel	1850	4	NA	NA	-270	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	84.6679789924542	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTCAGGATCTCACCTCA	-20	True	NA	26	True	AATAAA	-27	NA	43270675	43274000	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_43270794_43270880_43271254_43272183_43272340_43272577
H1_mix_00000923	chr1	+	333	3	FSM	ENSG00000066056.14	ENST00000480269.1	333	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1	2196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGGATCAACTGTGCAGCT	2106	False	NA	NA	False	NA	NA	NA	43307141	43309045	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43307274_43307431_43307573_43308985
H1_mix_00000931	chr1	+	7793	34	FSM	ENSG00000142949.17	ENST00000359947.9	7720	34	0	-73	0	73	multi-exon	FALSE	canonical	3	6	junction_13	234.453106085563	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCCTGCTCCTGAGGAGA	3	True	NA	91	True	NA	NA	NA	43530882	43623739	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43531091_43538197_43538278_43545030_43545167_43553491_43553638_43553799_43553942_43569589_43569779_43578809_43578921_43588730_43589001_43590971_43591554_43591811_43591949_43592456_43592602_43597747_43598054_43598719_43598914_43602070_43602098_43603415_43603534_43603610_43604190_43604902_43605001_43605189_43605444_43605528_43605623_43606239_43606459_43606813_43606969_43609382_43609499_43613617_43613716_43617444_43617569_43617735_43617912_43618629_43618750_43619047_43619203_43619287_43619574_43619679_43619859_43620094_43620222_43620453_43620580_43620837_43620993_43621096_43621233_43621934
H1_mix_00000934	chr1	+	6308	21	FSM	ENSG00000142949.17	ENST00000496447.5	5887	21	-415	-6	-415	6	multi-exon	FALSE	canonical	3	691	junction_1	117.225167946137	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTCAGCTGTTTCTG	6706	False	NA	24	True	AATAAA	-32	NA	43597658	43623672	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43598914_43603415_43603534_43603610_43604190_43604902_43605001_43605189_43605444_43605528_43605623_43606239_43606459_43606813_43606969_43609382_43609499_43613617_43613716_43617444_43617569_43617735_43617912_43618629_43618750_43619047_43619203_43619287_43619574_43619679_43619859_43620094_43620222_43620453_43620580_43620837_43620993_43621096_43621233_43621934
H1_mix_00000950	chr1	+	2476	6	FSM	ENSG00000132768.14	ENST00000255108.8	2466	6	-10	0	0	0	multi-exon	FALSE	canonical	3	309	junction_2	16.6973051717934	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTGTTTCTTTTTAAT	0	True	NA	23	True	AATAAA	-15	NA	43969999	43973369	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43970323_43970595_43970709_43970965_43971190_43971386_43972071_43972157_43972335_43972414
H1_mix_00000951	chr1	+	2424	6	FSM	ENSG00000132768.14	ENST00000495421.1	2414	6	-10	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	112.838645862134	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTGTTTCTTTTTAAT	0	True	NA	23	True	AATAAA	-15	NA	43969999	43973369	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43970271_43970595_43970709_43970965_43971190_43971386_43972071_43972157_43972335_43972414
H1_mix_00000953	chr1	+	1003	8	FSM	ENSG00000117410.14	ENST00000472174.7	987	8	-16	0	0	0	multi-exon	FALSE	canonical	3	1505	junction_7	62.9330710244735	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCAGCTTCTGTTGCCCTC	5	True	NA	28	True	AATAAA	-21	NA	43974943	43978295	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43975108_43975799_43975849_43976089_43976174_43976301_43976380_43976589_43976660_43976772_43976825_43977025_43977217_43977980
H1_mix_00000954	chr1	+	2432	6	FSM	ENSG00000117410.14	ENST00000468183.5	2432	6	0	0	0	0	multi-exon	FALSE	canonical	3	1576	junction_1	48.7253527437206	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCAGCTTCTGTTGCCCTC	32	True	NA	28	True	AATAAA	-21	NA	43974970	43978295	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43975849_43976089_43976174_43976301_43976380_43976589_43976660_43976772_43976825_43977025
H1_mix_00000958	chr1	+	2193	7	FSM	ENSG00000117411.18	ENST00000372324.6	2193	7	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_1	81.3478470656859	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCTCCCTTGTCTGTTTG	-16	True	NA	14	True	AGTAAA	-14	NA	43979209	43991168	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43979512_43981108_43981474_43981688_43981925_43984864_43985056_43985277_43985401_43985516_43985622_43990297
H1_mix_00000961	chr1	+	728	6	FSM	ENSG00000159214.13	ENST00000490064.5	728	6	0	0	0	0	multi-exon	TRUE	canonical	3	5	junction_1	36.149688795341	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAAGGGCTGGTCACCGA	-31	True	NA	NA	False	NA	NA	NA	43991773	43996155	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43992005_43993889_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
H1_mix_00000962	chr1	+	1425	8	NIC	ENSG00000159214.13	novel	1472	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	13	junction_1	34.9115500448005	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	-3	True	NA	16	True	ATTAAA	-18	NA	43991801	43996528	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_43992005_43992152_43992388_43992522_43992640_43993889_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
H1_mix_00000971	chr1	+	1552	11	FSM	ENSG00000178028.14	ENST00000315913.9	1552	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	102.861119962793	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTTTCCTTTCCTTCA	-15	True	NA	26	True	AATAGA	-23	NA	44213487	44220681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_44213528_44213708_44213859_44214349_44214442_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
H1_mix_00000972	chr1	+	1631	11	NIC	ENSG00000178028.14	novel	1742	10	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	120.510621938483	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGCTGCTTCCTTTTCCT	-7	True	NA	18	True	AATAGA	-15	NA	44213495	44220673	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_44213663_44213748_44213859_44214349_44214442_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
H1_mix_00000973	chr1	+	4552	7	FSM	ENSG00000178028.14	ENST00000488433.5	4552	7	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_2	25.2548125226769	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTTTCCTTTCCTTCA	1108	False	NA	26	True	AATAGA	-23	NA	44214832	44220681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
H1_mix_00000974	chr1	+	3099	15	FSM	ENSG00000187147.18	ENST00000355387.6	3099	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	216.247448964545	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTGTGTTATGTGT	23	True	NA	NA	False	ATTAAA	-16	NA	44405193	44651723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_44405527_44411980_44412723_44614164_44614298_44622741_44622788_44626296_44626399_44632342_44632386_44635544_44635589_44636029_44636163_44644697_44644795_44644994_44645082_44645220_44645277_44645409_44645489_44649660_44649770_44649882_44649958_44650703
H1_mix_00000975	chr1	+	3042	15	FSM	ENSG00000187147.18	ENST00000361799.7	3042	15	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	215.87450294189	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTGTGTTATGTGT	-1	True	NA	NA	False	ATTAAA	-16	NA	44405254	44651723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_44405531_44411980_44412723_44614164_44614298_44622741_44622788_44626296_44626399_44632342_44632386_44635544_44635589_44636029_44636163_44644697_44644795_44644994_44645082_44645220_44645277_44645409_44645489_44649660_44649770_44649882_44649958_44650703
H1_mix_00000977	chr1	+	1200	10	FSM	ENSG00000187147.18	ENST00000440132.2	1200	10	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_1	108.566188493244	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGTGGCATGGGGGTCG	9055	False	NA	NA	False	NA	NA	NA	44631731	44649957	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_44632209_44632342_44632386_44635544_44635589_44636029_44636163_44644697_44644795_44644994_44645082_44645220_44645277_44645409_44645489_44649660_44649770_44649882
H1_mix_00000980	chr1	+	2062	11	NIC	ENSG00000187147.18	novel	2734	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	259	junction_1	119.010755816439	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTGTGTTATGTGT	3	True	NA	NA	False	ATTAAA	-16	NA	44631967	44651723	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_44632209_44632342_44632386_44635544_44635667_44636029_44636163_44644697_44644795_44644994_44645082_44645220_44645277_44645409_44645489_44649660_44649770_44649882_44649958_44650703
H1_mix_00000981	chr1	+	1988	11	NIC	ENSG00000187147.18	novel	2734	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	167	junction_1	126.571086745749	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTGTGTTATGTGT	3	True	NA	NA	False	ATTAAA	-16	NA	44631967	44651723	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_44632213_44632342_44632386_44635544_44635589_44636029_44636163_44644697_44644795_44644994_44645082_44645220_44645277_44645409_44645489_44649660_44649770_44649882_44649958_44650703
H1_mix_00000982	chr1	+	2066	11	NIC	ENSG00000187147.18	novel	2734	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	167	junction_1	138.794956680709	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTGTGTTATGTGT	3	True	NA	NA	False	ATTAAA	-16	NA	44631967	44651723	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_44632213_44632342_44632386_44635544_44635667_44636029_44636163_44644697_44644795_44644994_44645082_44645220_44645277_44645409_44645489_44649660_44649770_44649882_44649958_44650703
H1_mix_00000983	chr1	+	1984	11	NIC	ENSG00000187147.18	novel	2734	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	259	junction_1	103.631269412277	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTGTGTTATGTGT	3	True	NA	NA	False	ATTAAA	-16	NA	44631967	44651723	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_44632209_44632342_44632386_44635544_44635589_44636029_44636163_44644697_44644795_44644994_44645082_44645220_44645277_44645409_44645489_44649660_44649770_44649882_44649958_44650703
H1_mix_00000987	chr1	+	2881	21	FSM	ENSG00000142945.13	ENST00000372224.9	2862	21	-19	0	0	0	multi-exon	FALSE	canonical	3	314	junction_4	61.6200251541656	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCTGGGATGTGTCTGAG	4	True	NA	29	True	AATAAA	-37	NA	44739817	44767767	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_44740003_44740912_44741008_44747383_44747486_44747651_44747701_44750441_44750565_44753131_44753255_44753732_44753834_44754749_44754846_44755928_44755984_44756074_44756238_44757555_44757647_44757907_44757972_44758048_44758141_44759205_44759349_44760279_44760485_44760591_44760703_44761915_44761984_44762345_44762452_44762544_44762659_44766825_44766950_44767096
H1_mix_00000991	chr1	+	986	3	FSM	ENSG00000142937.12	ENST00000470475.1	981	3	-5	0	0	0	multi-exon	FALSE	canonical	3	7586	junction_1	1726	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCTCATGGGGCTGAAGA	7	True	NA	NA	False	NA	NA	NA	44775572	44777525	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_44775601_44776033_44776141_44776674
H1_mix_00000992	chr1	+	685	6	FSM	ENSG00000142937.12	ENST00000372209.3	685	6	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_3	4302.76963826789	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTTGCCCTGCAAAACT	7	True	NA	52	True	AATATA	-21	NA	44775572	44778779	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_44775601_44776033_44776141_44776674_44776715_44777613_44777790_44777999_44778130_44778575
H1_mix_00000994	chr1	+	1115	5	FSM	ENSG00000142937.12	ENST00000485390.5	1115	5	0	0	0	0	multi-exon	FALSE	canonical	3	11038	junction_1	568.237351377046	1617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTTGCCCTGCAAAACT	70	False	NA	52	True	AATATA	-21	NA	44775635	44778779	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_44776141_44776674_44776775_44777613_44777790_44777999_44778130_44778575
H1_mix_00000995	chr1	+	898	3	FSM	ENSG00000142937.12	ENST00000464658.1	898	3	0	0	0	0	multi-exon	FALSE	canonical	3	11081	junction_1	197.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTTGCCCTGCAAAACT	1180	False	NA	52	True	AATATA	-21	NA	44777225	44778779	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_44777790_44777999_44778130_44778575
H1_mix_00000998	chr1	+	844	2	FSM	ENSG00000173846.13	ENST00000493100.1	873	2	29	0	29	0	multi-exon	TRUE	canonical	3	21	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGGGCTGCTCTCCAGA	1328	False	NA	NA	False	NA	NA	NA	44804649	44805600	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_44805380_44805486
H1_mix_00001001	chr1	+	1199	10	FSM	ENSG00000126088.14	ENST00000246337.9	1193	10	-6	0	0	0	multi-exon	FALSE	canonical	3	719	junction_1	58.0372379395705	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTGTAGTTTTGTTTG	1	True	NA	15	True	AATAAA	-16	NA	45012247	45015575	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_45012286_45012906_45013020_45013135_45013216_45013291_45013355_45013593_45013792_45013908_45014071_45014438_45014577_45014735_45014837_45014939_45015007_45015336
H1_mix_00001007	chr1	+	2173	8	FSM	ENSG00000132773.12	ENST00000495703.5	2173	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	37.24053091535	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAAATATTTGACCAGCT	6	True	NA	18	True	NA	NA	NA	45340220	45343964	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_45340543_45341072_45341216_45341302_45341344_45341472_45341570_45341948_45342108_45342383_45342644_45342734_45343003_45343081
H1_mix_00001009	chr1	+	1715	10	FSM	ENSG00000117448.14	ENST00000372070.7	1818	10	103	0	103	0	multi-exon	TRUE	canonical	3	398	junction_2	428.298816882804	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTTGCTTGTCTTATT	NA	False	NA	27	True	AATAAA	-17	NA	45550645	45570049	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_45551156_45552435_45552564_45561788_45561879_45566568_45566689_45566868_45567021_45567981_45568178_45568484_45568685_45568926_45569000_45569142_45569230_45569890
H1_mix_00001010	chr1	+	1360	10	FSM	ENSG00000117448.14	ENST00000621846.4	1360	10	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_1	383.652910265979	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGCTTGCTTGTCTTAT	NA	False	NA	26	True	AATAAA	-16	NA	45550782	45570048	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_45550877_45550965_45551156_45561788_45561879_45566568_45566689_45566868_45567021_45567981_45568178_45568484_45568685_45568926_45569000_45569142_45569230_45569890
H1_mix_00001013	chr1	+	1626	4	FSM	ENSG00000117448.14	ENST00000473038.5	948	4	-680	2	0	0	multi-exon	FALSE	canonical	3	253	junction_1	609.184336269044	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTGCTTGCTTGTCTTA	2113	False	NA	25	True	AATAAA	-15	NA	45566868	45570047	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_45568178_45568926_45569000_45569142_45569230_45569890
H1_mix_00001014	chr1	+	630	3	FSM	ENSG00000117448.14	ENST00000475919.1	630	3	0	0	0	0	multi-exon	FALSE	canonical	3	1418	junction_1	112.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTGCTTGCTTGTCTTA	3858	False	NA	25	True	AATAAA	-15	NA	45568613	45570047	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_45569000_45569142_45569230_45569890
H1_mix_00001019	chr1	+	3194	14	FSM	ENSG00000132780.17	ENST00000351223.7	1538	14	-1010	-646	-791	0	multi-exon	FALSE	canonical	3	231	junction_5	746.159540025856	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTCTGGAATTATGTT	NA	False	NA	18	True	AATAAA	-14	NA	45583054	45618893	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_45584206_45591222_45591271_45602254_45602366_45604935_45605017_45606481_45606592_45613168_45613249_45614095_45614182_45614292_45614367_45615012_45615202_45615304_45615472_45616336_45616394_45616625_45616704_45617462_45617592_45618060
H1_mix_00001020	chr1	+	3225	15	FSM	ENSG00000132780.17	ENST00000350030.8	3225	15	0	0	0	0	multi-exon	FALSE	canonical	3	1092	junction_5	629.410450585405	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTCTGGAATTATGTT	-2	True	NA	18	True	AATAAA	-14	NA	45584040	45618893	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_45584206_45591222_45591271_45602254_45602366_45604935_45605017_45606481_45606592_45607320_45608338_45613168_45613249_45614095_45614182_45614292_45614367_45615012_45615202_45615304_45615472_45616336_45616394_45616625_45616704_45617462_45617592_45618060
H1_mix_00001021	chr1	+	3659	9	FSM	ENSG00000132780.17	ENST00000481782.1	3659	9	0	0	0	0	multi-exon	FALSE	canonical	3	1969	junction_1	284.00063270176	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTTGAGGCTTTGATGG	2911	False	NA	11	True	AATAAA	-11	NA	45610553	45618244	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_45613249_45614095_45614182_45614292_45614367_45615012_45615202_45615304_45615472_45616336_45616394_45616625_45616704_45617462_45617592_45618060
H1_mix_00001032	chr1	+	636	6	FSM	ENSG00000085999.13	ENST00000473251.2	834	6	198	0	198	0	multi-exon	FALSE	canonical	2	3	junction_1	154.741849543037	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGAGTTGGGCTTGTGTC	NA	False	NA	NA	False	NA	NA	NA	46261045	46272800	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_46261075_46261260_46261386_46267458_46267610_46270658_46270786_46272465_46272541_46272671
H1_mix_00001033	chr1	+	754	5	FSM	ENSG00000085999.13	ENST00000664182.1	754	5	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_2	38.0878917767839	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGTGACAAAGTAGTGCT	NA	False	NA	NA	False	NA	NA	NA	46267504	46273670	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_46267610_46270658_46270786_46272465_46272541_46272671_46272803_46273354
H1_mix_00001039	chr1	+	4413	6	FSM	ENSG00000117481.11	ENST00000474844.6	4347	6	-66	0	-48	0	multi-exon	FALSE	canonical	3	46	junction_3	8.08455317256309	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTCTGTGAAGCCTGGA	-4	True	NA	12	True	AATAAA	-14	NA	46340740	46365018	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_46340920_46344800_46345145_46346920_46347076_46352867_46353029_46360703_46360829_46361569
H1_mix_00001040	chr1	+	4509	6	NIC	ENSG00000117481.11	novel	4347	6	NA	NA	-124	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_2	25.298221281347	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTCTGTGAAGCCTGGA	483	False	NA	12	True	AATAAA	-14	NA	46340664	46365018	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_46340920_46341322_46341498_46344800_46345145_46352867_46353029_46360703_46360829_46361569
H1_mix_00001041	chr1	+	865	5	FSM	ENSG00000117481.11	ENST00000469918.5	865	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	18.7683243791235	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAAGTTCGAGTTACCT	17	True	NA	NA	False	NA	NA	NA	46340819	46352958	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_46340920_46341322_46341498_46344800_46345145_46346920_46347076_46352867
H1_mix_00001049	chr1	+	398	2	FSM	ENSG00000232022.8	ENST00000635606.2	492	2	94	0	62	0	multi-exon	FALSE	canonical	3	20	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGGGGTAATTTGTTAT	41	False	NA	7	True	AATAAA	-21	NA	46442923	46482493	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_46443038_46482209
H1_mix_00001057	chr1	+	2047	1	FSM	ENSG00000235105.1	ENST00000412769.1	1257	1	-242	-548	-242	548	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACAGAAATTGTAATTTG	24	False	NA	NA	False	ATTAAA	-17	NA	48435724	48437771	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_48435700_48437800
H1_mix_00001062	chr1	+	2876	23	ISM	ENSG00000117859.19	ENST00000371714.5	3352	26	39908	0	-5	0	3prime_fragment	FALSE	canonical	3	147	junction_3	185.360760600101	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATCTTTTATTATCTT	-2	True	NA	20	True	CATAAA	-29	NA	51617086	51788469	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_51617222_51651990_51652042_51669433_51669513_51714002_51714080_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
H1_mix_00001063	chr1	+	3665	24	FSM	ENSG00000117859.19	ENST00000428468.6	3660	24	-5	0	-5	0	multi-exon	FALSE	canonical	3	147	junction_3	183.922766728274	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGACTGCAGTTTATTTAT	-2	True	NA	6	True	CATAAA	-44	NA	51617086	51789219	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_51617222_51651990_51652042_51669433_51669513_51714002_51714080_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51756319_51756359_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
H1_mix_00001064	chr1	+	2226	21	FSM	ENSG00000117859.19	ENST00000531828.5	2210	21	-16	0	-16	0	multi-exon	FALSE	canonical	3	311	junction_6	117.471475261018	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGGAAGATGCAAAGTTTA	2636	False	NA	NA	False	NA	NA	NA	51729791	51787789	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_51730125_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51756319_51756359_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
H1_mix_00001065	chr1	+	2744	20	FSM	ENSG00000117859.19	ENST00000361556.9	2721	20	-23	0	-16	0	multi-exon	FALSE	canonical	3	186	junction_1	128.759368860103	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATCTTTTATTATCTT	2636	False	NA	20	True	CATAAA	-29	NA	51729791	51788469	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_51730002_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
H1_mix_00001067	chr1	+	2777	20	FSM	ENSG00000117859.19	ENST00000462759.5	2755	20	-22	0	0	0	multi-exon	FALSE	canonical	3	293	junction_5	110.341323882907	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATCTTTTATTATCTT	5	True	NA	20	True	CATAAA	-29	NA	51729881	51788469	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_51730125_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
H1_mix_00001069	chr1	+	2129	5	FSM	ENSG00000134717.18	ENST00000489308.6	794	5	-72	-1263	0	0	multi-exon	FALSE	canonical	3	297	junction_3	442.752188023955	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGTGTACAGAATTTCC	43	False	NA	45	True	NA	NA	NA	52056198	52088418	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_52056380_52059834_52059902_52064824_52064939_52086111_52086172_52086711
H1_mix_00001070	chr1	+	4557	6	FSM	ENSG00000134717.18	ENST00000313334.13	4533	6	-24	0	0	0	multi-exon	FALSE	canonical	3	1177	junction_1	73.6966756373719	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCAGTCTGATGCGGCAG	4	True	NA	4	True	AATACA	-17	NA	52056270	52090716	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_52056380_52059834_52059902_52064824_52064939_52083339_52083542_52086111_52086172_52086711
H1_mix_00001071	chr1	+	2159	5	FSM	ENSG00000134717.18	ENST00000472944.6	2159	5	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_1	450.064439830565	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGTGTACAGAATTTCC	-8	True	NA	45	True	NA	NA	NA	52056303	52088418	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_52056380_52064824_52064939_52083339_52083542_52086111_52086172_52086711
H1_mix_00001072	chr1	+	5148	19	FSM	ENSG00000157077.16	ENST00000287727.8	5148	19	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	3.93661194179042	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTGCACTCTTTGTACA	-13	True	NA	3	True	AATAAA	-14	NA	52142088	52346634	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_52142404_52216368_52216475_52233170_52233277_52237487_52239596_52263772_52263873_52266654_52266832_52268462_52268633_52274463_52274585_52278491_52278615_52281660_52281817_52293452_52293678_52295894_52295978_52303820_52303926_52332767_52332919_52334687_52334769_52337771_52337935_52340125_52340232_52344767_52344945_52346059
H1_mix_00001074	chr1	+	5233	10	FSM	ENSG00000134748.13	ENST00000257181.10	5233	10	0	0	0	0	multi-exon	TRUE	canonical	3	384	junction_3	28.4752437421146	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTTGTTGGGAGTTAAAA	-5	True	NA	NA	False	AATAAA	-26	NA	52404601	52420836	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_52404880_52405679_52405840_52408568_52408691_52411114_52411201_52412513_52412625_52413878_52413992_52414620_52414648_52414761_52414860_52415337_52415387_52416647
H1_mix_00001075	chr1	+	1059	8	FSM	ENSG00000134748.13	ENST00000474048.1	1059	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	147.989381858487	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGCTGTAGTTTAGTTTTT	21	False	NA	33	True	ATTAAA	-22	NA	52404627	52417022	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_52404880_52405679_52405714_52412513_52412625_52413878_52413992_52414620_52414648_52414761_52414860_52415337_52415387_52416647
H1_mix_00001084	chr1	+	2723	5	FSM	ENSG00000157184.7	ENST00000371486.4	2699	5	-24	0	0	0	multi-exon	TRUE	canonical	3	218	junction_3	33.7120156620751	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTTCTTAATTTCTTTT	-24	True	NA	8	True	AATAAA	-19	NA	53196799	53214197	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_53197096_53200718_53200800_53202322_53202430_53210014_53211320_53213263
H1_mix_00001085	chr1	+	2405	3	FSM	ENSG00000157184.7	ENST00000638135.1	2405	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	117.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAATAAAGTTTAATTTTT	79	False	NA	-19	True	NA	NA	NA	53196902	53214170	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_53197096_53210014_53211320_53213263
H1_mix_00001087	chr1	+	1764	9	FSM	ENSG00000116212.15	ENST00000371370.8	1764	9	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	83.2442753286975	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGCTTGTGGATTATAG	-7	True	NA	28	True	AATAAA	-19	NA	53946349	53968168	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_53946550_53947787_53947822_53951985_53952473_53958148_53958281_53960355_53960475_53962033_53962123_53962295_53962410_53966295_53966381_53967664
H1_mix_00001088	chr1	+	1730	8	FSM	ENSG00000116212.15	ENST00000319223.8	1727	8	-3	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	59.8682226363256	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGCTTGTGGATTATAG	-7	True	NA	28	True	AATAAA	-19	NA	53946349	53968168	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_53946550_53951985_53952473_53958148_53958281_53960355_53960475_53962033_53962123_53962295_53962410_53966295_53966381_53967664
H1_mix_00001089	chr1	+	1849	9	NIC	ENSG00000116212.15	novel	1764	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	120.54330134852	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGCTTGTGGATTATAG	-6	True	NA	28	True	AATAAA	-19	NA	53946350	53968168	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_53946550_53947861_53947982_53951985_53952473_53958148_53958281_53960355_53960475_53962033_53962123_53962295_53962410_53966295_53966381_53967664
H1_mix_00001091	chr1	+	695	3	NNC	ENSG00000116205.14	novel	2538	5	NA	NA	12	-41083	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	24.5	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTTGTACTTAGTCCCCT	13	True	NA	NA	False	AATAAA	-36	NA	54053619	54055410	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_54053759_54054380_54054525_54054998
H1_mix_00001103	chr1	+	1595	14	NIC	ENSG00000172456.18	novel	4072	17	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	17.1484986490701	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAATTAGAGTCTTCATT	-13	True	NA	8	True	AATAAA	-19	NA	59296795	59762724	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_59296908_59346246_59346399_59378748_59378838_59456960_59457077_59512310_59512440_59554123_59554228_59607802_59607911_59625987_59626050_59638227_59638376_59660218_59660294_59667282_59667404_59674038_59674134_59757930_59757993_59762502
H1_mix_00001105	chr1	+	1898	16	NIC	ENSG00000172456.18	novel	4072	17	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_2	16.5939748101532	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAATTAGAGTCTTCATT	11	True	NA	8	True	AATAAA	-19	NA	59296819	59762724	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_59296908_59321535_59321751_59339957_59340070_59346246_59346399_59378748_59378838_59456960_59457077_59512310_59512440_59554123_59554228_59607802_59607911_59625987_59626050_59638227_59638376_59660218_59660294_59667282_59667404_59674038_59674134_59757930_59757993_59762502
H1_mix_00001110	chr1	+	7979	35	FSM	ENSG00000132849.22	ENST00000484562.5	5448	35	-33	-2498	-33	28	multi-exon	FALSE	canonical	3	59	junction_5	8.30933106206282	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCAAATGTTTTCTTGGA	-21	True	NA	46	True	NA	NA	NA	61742443	62117423	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_61742556_61762857_61762915_61763012_61763180_61766278_61766474_61769282_61769423_61771430_61771627_61775205_61775335_61787753_61787973_61791347_61791448_61795466_61795559_61797286_61797429_61801622_61801770_61805447_61805525_61808473_61808531_61822944_61823080_61827421_61827584_61833653_61833786_61856029_61856240_61861550_61861668_61864237_61864634_61875242_61875367_61884236_61884409_61899582_61899655_61901281_61901460_61908371_61908483_61914586_61914665_61927729_61927830_61990167_61990365_62017855_62017948_62037976_62038050_62050965_62051059_62079449_62079568_62084514_62084649_62108436_62108521_62114052
H1_mix_00001111	chr1	+	8624	44	FSM	ENSG00000132849.22	ENST00000642238.2	8621	44	-3	0	0	0	multi-exon	FALSE	canonical	3	11	junction_43	16.9086240840395	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATGGAGTTTTATTATA	12	True	NA	16	True	AATAAA	-17	NA	61742476	62163915	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_61742556_61762857_61762915_61763012_61763180_61766278_61766474_61769282_61769423_61771430_61771627_61775205_61775335_61787753_61787973_61791347_61791448_61795466_61795559_61797286_61797429_61801622_61801770_61805447_61805525_61808473_61808531_61822944_61823080_61827421_61827584_61833653_61833786_61856029_61856240_61861550_61861668_61864237_61864634_61875242_61875367_61884236_61884409_61899582_61899655_61901281_61901460_61908371_61908483_61914586_61914665_61927729_61927830_61990167_61990365_62017855_62017948_62037976_62038050_62050965_62051059_62079449_62079568_62084514_62084649_62108436_62108521_62114052_62114247_62116531_62116680_62117131_62117219_62121180_62121296_62123020_62123059_62127971_62128095_62128840_62128946_62148283_62148391_62153357_62153482_62160907
H1_mix_00001114	chr1	+	5208	18	FSM	ENSG00000132849.22	ENST00000646453.1	5234	18	-12	38	-12	-3	multi-exon	FALSE	canonical	3	6	junction_1	27.3602140868615	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCAAATGGAGTTTTATT	-8	True	NA	13	True	AATAAA	-14	NA	61952040	62163912	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_61952412_61990167_61990365_62017855_62017948_62037976_62038050_62050965_62051059_62079449_62079568_62084514_62084649_62108436_62108521_62114052_62114247_62116531_62116680_62117131_62117219_62121180_62121296_62123020_62123059_62127971_62128095_62128840_62128946_62148283_62148391_62153357_62153482_62160907
H1_mix_00001122	chr1	+	3602	9	FSM	ENSG00000162607.13	ENST00000339950.5	3602	9	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_2	24.9899979991996	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGTGTGTATATATATA	-27	True	NA	86	True	TATAAA	-26	NA	62437048	62451804	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_62437401_62439798_62440038_62441487_62441609_62442194_62442300_62443158_62443320_62444737_62445430_62447340_62447512_62448464_62448667_62450245
H1_mix_00001124	chr1	+	2939	11	FSM	ENSG00000125703.15	ENST00000371120.7	2890	11	-8	-41	-5	38	multi-exon	FALSE	canonical	3	138	junction_1	48.0141645767163	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAATACTAATTTTCCTAG	-24	True	NA	51	True	AATACA	-18	NA	62784126	62865554	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_62784226_62803718_62803863_62805171_62805256_62816574_62816809_62819004_62819336_62821138_62821210_62829039_62829177_62834037_62834117_62834775_62834853_62841427_62841548_62863991
H1_mix_00001127	chr1	+	3325	15	FSM	ENSG00000088035.18	ENST00000263440.6	3325	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	83.0092507753546	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACCTGATTCAAGGTATC	-17	True	NA	NA	False	AATAAA	-32	NA	63367626	63438553	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_63367688_63370770_63371060_63396512_63396598_63402253_63402344_63404452_63404542_63406316_63406400_63407061_63407127_63411145_63411332_63411925_63412062_63414060_63414147_63415872_63415958_63419369_63419441_63428732_63428802_63428927_63429127_63436822
H1_mix_00001128	chr1	+	2026	15	FSM	ENSG00000088035.18	ENST00000603108.6	2055	15	29	0	7	0	multi-exon	FALSE	non_canonical	0	0	junction_7	96.9865338853907	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTATATGGAGACCAAAG	2	True	NA	-12	True	NA	NA	NA	63367609	63437182	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_63367688_63370770_63371060_63396512_63396598_63402253_63402344_63404452_63404542_63406316_63406400_63407061_63407127_63411145_63411332_63411925_63412062_63414060_63414147_63415817_63415958_63419369_63419441_63428732_63428802_63428927_63429127_63436822
H1_mix_00001129	chr1	+	1930	15	NNC	ENSG00000088035.18	novel	2055	15	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	83.0092507753546	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTATATGGAGACCAAAG	5	True	NA	-12	True	NA	NA	NA	63367648	63437182	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_63367688_63370770_63371060_63396512_63396598_63402253_63402344_63404452_63404542_63406316_63406400_63407061_63407127_63411147_63411332_63411925_63412062_63414060_63414147_63415872_63415958_63419369_63419441_63428732_63428802_63428927_63429127_63436822
H1_mix_00001139	chr1	+	6779	5	NIC	ENSG00000162433.15	novel	6887	6	NA	NA	-176	-9	combination_of_known_splicesites	FALSE	canonical	3	55	junction_1	384.092762233292	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGCGAATTCATTTGTTT	405	False	NA	30	True	AATAAA	-18	NA	65147372	65232136	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_65147666_65190709_65190830_65218753_65218927_65224751_65224871_65226062
H1_mix_00001141	chr1	+	6998	6	FSM	ENSG00000162433.15	ENST00000395334.6	6998	6	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	328.221510568701	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGTTTGTATAGCTT	50	False	NA	39	True	AATAAA	-27	NA	65147829	65232145	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_65148058_65148277_65148553_65190709_65190830_65218753_65218927_65224751_65224871_65226062
H1_mix_00001142	chr1	+	6845	5	FSM	ENSG00000162433.15	ENST00000327299.8	6845	5	0	0	0	0	multi-exon	FALSE	canonical	3	683	junction_1	115.970901522753	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGTTTGTATAGCTT	13	True	NA	39	True	AATAAA	-27	NA	65148202	65232145	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_65148553_65190709_65190830_65218753_65218927_65224751_65224871_65226062
H1_mix_00001143	chr1	+	6776	5	FSM	ENSG00000162433.15	ENST00000474968.5	928	5	-142	-5706	-142	0	multi-exon	FALSE	canonical	3	178	junction_1	331.089395027989	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGTTTGTATAGCTT	1	True	NA	39	True	AATAAA	-27	NA	65148859	65232145	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_65149141_65190709_65190830_65218753_65218927_65224751_65224871_65226062
H1_mix_00001148	chr1	+	393	3	FSM	ENSG00000213625.9	ENST00000497874.5	377	3	-16	0	-16	0	multi-exon	FALSE	canonical	3	27	junction_2	99.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGCTCATTTGTTTATG	-32	True	NA	9	True	AATAAA	-18	NA	65420651	65428009	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_65420741_65425302_65425379_65427781
H1_mix_00001149	chr1	+	4557	4	FSM	ENSG00000213625.9	ENST00000371065.9	4541	4	-16	0	-16	0	multi-exon	FALSE	canonical	3	175	junction_3	20.8859335970941	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGGCTTTTATGTACATT	-32	True	NA	NA	False	AATAAA	-21	NA	65420651	65436007	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_65420741_65425302_65425379_65429861_65430049_65431802
H1_mix_00001154	chr1	+	3988	10	FSM	ENSG00000184588.18	ENST00000371045.9	3982	10	-9	3	-9	2	multi-exon	FALSE	canonical	3	35	junction_3	5.01356185452377	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTCTGTAGGCCCACTTA	182	False	NA	5	True	AATAAA	-17	NA	66331994	66374576	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_66332621_66355526_66355621_66361614_66361794_66363167_66363267_66363406_66363572_66365666_66365767_66367695_66367851_66367942_66368066_66368786_66368970_66372312
H1_mix_00001156	chr1	+	3130	15	FSM	ENSG00000198160.15	ENST00000371014.5	1728	15	-41	-1361	23	0	multi-exon	FALSE	canonical	2	30	junction_2	32.3520967367697	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTGCTATCGATGGA	NA	False	NA	18	True	AATAAA	-19	NA	66924917	66988031	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_66925096_66926141_66926243_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087_66963161_66970807_66970960_66971654_66971737_66972896_66972992_66976594_66976723_66981778_66981919_66984571_66984593_66986402
H1_mix_00001157	chr1	+	4984	15	FSM	ENSG00000198160.15	ENST00000357692.6	4978	15	-6	0	-6	0	multi-exon	FALSE	canonical	3	9	junction_2	40.7792088882438	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTGCTATCGATGGA	NA	False	NA	18	True	AATAAA	-19	NA	66924950	66988031	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_66925096_66926141_66926243_66928886_66928964_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087_66963161_66970807_66970960_66971654_66971737_66972896_66972992_66976594_66976723_66981778_66981919_66984571
H1_mix_00001159	chr1	+	3623	16	Fusion	ENSG00000198160.15_ENSG00000289394.1	novel	473	2	NA	NA	160	0	multi-exon	FALSE	canonical	1	3	junction_2	42.5846085914722	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTGAGTAAGAAGTAATTT	-7	True	NA	NA	False	ATTAAA	-17	NA	66925486	66988619	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_+_66925535_66926141_66926243_66928928_66928964_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087_66963161_66970807_66970960_66971654_66971737_66972896_66972992_66976594_66976723_66981778_66981919_66984571_66984593_66986402
H1_mix_00001160	chr1	+	4819	13	FSM	ENSG00000198160.15	ENST00000355356.3	4818	13	0	-1	0	0	multi-exon	FALSE	canonical	3	65	junction_1	19.3238123107792	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTGCTATCGATGGA	-24	True	NA	18	True	AATAAA	-19	NA	66930242	66988031	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_66930401_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087_66963161_66970807_66970960_66971654_66971737_66972896_66972992_66976594_66976723_66981778_66981919_66984571
H1_mix_00001164	chr1	+	1373	4	FSM	ENSG00000116717.13	ENST00000370986.9	1352	4	-21	0	-21	0	multi-exon	FALSE	canonical	3	167	junction_2	12.2836838484589	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTATTGTGTGCTCTTG	127	False	NA	14	True	AATAAA	-22	NA	67685179	67688334	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_67685539_67686024_67686127_67686349_67686588_67687660
H1_mix_00001167	chr1	+	2395	13	FSM	ENSG00000116754.14	ENST00000370951.5	2385	13	-10	0	-10	0	multi-exon	FALSE	canonical	3	294	junction_1	293.336872611224	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAACCTTATCTCTTG	2	True	NA	NA	False	NA	NA	NA	70205671	70251617	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_70205781_70221614_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364_70250504_70250610
H1_mix_00001169	chr1	+	3784	13	FSM	ENSG00000116754.14	ENST00000370950.7	3784	13	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	311.187867515571	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTCCTTATTTATTT	11	True	NA	20	True	AATAAA	-21	NA	70205723	70253052	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_70205781_70221611_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364_70250504_70250607
H1_mix_00001170	chr1	+	2729	13	NIC	ENSG00000116754.14	novel	3784	13	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	294	junction_1	260.615444136034	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCATGTTCCTGTAAAAC	12	True	NA	13	True	AATAAA	-14	NA	70205724	70252001	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_70205781_70221614_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364_70250504_70250607
H1_mix_00001172	chr1	+	2709	13	NIC	ENSG00000116754.14	novel	3959	12	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_1	346.459583581629	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCATGTTCCTGTAAAAC	-7	True	NA	13	True	AATAAA	-14	NA	70221361	70252001	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_70221401_70221614_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364_70250504_70250610
H1_mix_00001173	chr1	+	2791	12	ISM	ENSG00000116754.14	ENST00000370951.5	2385	13	15812	-384	14	0	3prime_fragment	FALSE	canonical	3	525	junction_11	196.005144138937	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCATGTTCCTGTAAAAC	8	True	NA	13	True	AATAAA	-14	NA	70221493	70252001	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364_70250504_70250610
H1_mix_00001174	chr1	+	2910	12	NIC	ENSG00000116754.14	novel	1717	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	44	junction_9	363.306372998269	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCATGTTCCTGTAAAAC	27	False	NA	13	True	AATAAA	-14	NA	70221395	70252001	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249930_70250048_70250364_70250504_70250610
H1_mix_00001175	chr1	+	2800	12	FSM	ENSG00000116754.14	ENST00000370949.2	3959	12	108	1051	8	0	multi-exon	FALSE	canonical	3	805	junction_11	123.001713352308	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCATGTTCCTGTAAAAC	2	True	NA	13	True	AATAAA	-14	NA	70221487	70252001	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364_70250504_70250607
H1_mix_00001177	chr1	+	6919	11	FSM	ENSG00000116754.14	ENST00000484162.5	4008	11	-1856	-1055	0	0	multi-exon	FALSE	canonical	3	213	junction_1	306.913359109701	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTCCTTATTTATTT	6304	False	NA	20	True	AATAAA	-21	NA	70228421	70253052	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_70231976_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364_70250504_70250607
H1_mix_00001179	chr1	+	3501	2	FSM	ENSG00000116754.14	ENST00000461935.1	3501	2	0	0	0	0	multi-exon	FALSE	canonical	3	525	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCATGTTCCTGTAAAAC	3659	False	NA	13	True	AATAAA	-14	NA	70248393	70252001	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_70250504_70250610
H1_mix_00001182	chr1	+	793	3	FSM	ENSG00000197568.15	ENST00000361764.9	823	3	30	0	4	0	multi-exon	FALSE	canonical	3	36	junction_1	19	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-6	True	NA	14	True	ATTAAA	-22	NA	70354815	70368023	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_70355108_70366443_70366538_70367616
H1_mix_00001183	chr1	+	820	3	FSM	ENSG00000197568.15	ENST00000370940.7	815	3	-5	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	16.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-29	True	NA	14	True	ATTAAA	-22	NA	70354792	70368023	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_70355112_70366443_70366538_70367616
H1_mix_00001198	chr1	+	2315	11	FSM	ENSG00000117054.15	ENST00000680805.1	2315	11	0	0	0	0	multi-exon	TRUE	canonical	2	11	junction_8	193.371378440554	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAAAGTTACCTGTTCA	0	True	NA	-66	True	AAAAAG	-19	NA	75724430	75763596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_75724818_75728400_75728489_75732643_75732742_75732852_75732923_75733527_75733629_75734790_75734872_75739979_75740111_75745805_75745915_75750450_75750547_75761121_75761371_75762691
H1_mix_00001202	chr1	+	2281	12	FSM	ENSG00000117054.15	ENST00000370841.9	2261	12	-20	0	0	0	multi-exon	FALSE	canonical	3	532	junction_1	64.2159322163373	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTGAATTTAATATTTCT	-34	True	NA	17	True	TATAAA	-25	NA	75724688	75763679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_75724818_75728400_75728489_75732643_75732742_75732852_75732923_75733527_75733629_75734790_75734872_75739979_75740111_75745805_75745915_75749418_75749560_75750450_75750547_75761121_75761371_75762691
H1_mix_00001206	chr1	+	788	7	FSM	ENSG00000137955.16	ENST00000485459.5	788	7	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_2	158.769224557742	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTGTGAACGACAATTAC	-4	True	NA	NA	False	AGTAAA	-22	NA	75786227	75792254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_75786275_75787496_75787605_75789951_75790275_75790445_75790518_75791284_75791338_75791460_75791572_75792180
H1_mix_00001207	chr1	+	1461	9	FSM	ENSG00000137955.16	ENST00000319942.8	1448	9	-13	0	0	0	multi-exon	FALSE	canonical	3	213	junction_1	136.902280386413	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATAGGTTTGAATATGGT	11	False	NA	27	True	AATAAA	-24	NA	75786242	75795086	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_75786275_75787496_75787605_75789158_75789357_75789951_75790058_75791284_75791338_75791460_75791572_75792180_75792307_75794083_75794234_75794509
H1_mix_00001209	chr1	+	1537	9	NIC	ENSG00000137955.16	novel	2137	10	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	181.123533465422	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATAGGTTTGAATATGGT	1	True	NA	27	True	AATAAA	-24	NA	75786689	75795086	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_75786798_75787496_75787605_75789158_75789357_75789951_75790058_75791284_75791338_75791460_75791572_75792180_75792307_75794083_75794234_75794509
H1_mix_00001210	chr1	+	1606	11	NIC	ENSG00000137955.16	novel	2137	10	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	212.996924860431	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGACCGGTATTTTATT	11	False	NA	11	True	AATAAA	-25	NA	75786699	75794802	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_75786966_75787496_75787605_75789158_75789357_75789951_75790058_75790151_75790275_75790445_75790518_75791284_75791338_75791460_75791572_75792180_75792307_75794083_75794234_75794509
H1_mix_00001211	chr1	+	1867	9	NIC	ENSG00000137955.16	novel	2137	10	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	184.973942421629	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGAAGTCCTGTTATTC	16	False	NA	42	True	AATAAA	-27	NA	75786274	75794833	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_75786966_75787496_75787605_75789158_75789357_75789951_75790058_75791284_75791338_75791460_75791572_75792180_75792307_75794083_75794234_75794509
H1_mix_00001212	chr1	+	2137	10	FSM	ENSG00000137955.16	ENST00000471759.5	2137	10	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_3	191.599376271569	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGACCGGTATTTTATTT	12	False	NA	12	True	AATAAA	-26	NA	75786700	75794803	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_75787605_75789158_75789357_75789951_75790058_75790151_75790275_75790445_75790518_75791284_75791338_75791460_75791572_75792180_75792307_75794083_75794234_75794509
H1_mix_00001213	chr1	+	1773	10	NNC	ENSG00000137955.16	novel	2137	10	NA	NA	374	-2	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_7	212.554306786133	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCTGAAGTCCTGTTAT	388	False	NA	40	True	AATAAA	-25	NA	75787076	75794831	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_75787605_75789158_75789357_75789951_75790058_75790151_75790275_75790445_75790518_75791284_75791338_75791460_75791572_75792196_75792307_75794083_75794234_75794509
H1_mix_00001216	chr1	+	1177	2	FSM	ENSG00000137955.16	ENST00000459697.1	1177	2	0	0	0	0	multi-exon	FALSE	canonical	3	717	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAAGTCCTGTTATTCT	1977	False	NA	43	True	AATAAA	-28	NA	75793381	75794834	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_75794234_75794509
H1_mix_00001221	chr1	+	1061	3	FSM	ENSG00000117069.15	ENST00000480428.1	573	3	-49	-439	-49	439	multi-exon	FALSE	canonical	3	10	junction_2	18.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTCTCTTCTTTCCCAA	106	False	NA	NA	False	AATGAA	-17	NA	76867430	76871822	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_76867691_76868496_76868743_76871267
H1_mix_00001225	chr1	+	1979	15	FSM	ENSG00000180488.16	ENST00000645756.1	1978	15	-1	0	-1	0	multi-exon	TRUE	canonical	3	3	junction_14	9.18433671074436	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCAGCTCACATTATTCC	-14	True	NA	NA	False	AATAAA	-16	NA	77779628	77868636	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_77779737_77783237_77783352_77801330_77801509_77803269_77803407_77806974_77807102_77813733_77813868_77815107_77815232_77843306_77843408_77858937_77859057_77859313_77859387_77860039_77860127_77861223_77861323_77863893_77864029_77866337_77866392_77868247
H1_mix_00001227	chr1	+	6404	16	FSM	ENSG00000180488.16	ENST00000443751.3	6409	16	5	0	-1	0	multi-exon	FALSE	canonical	3	11	junction_14	7.36538450380487	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTTGCTGATGTATTGA	-14	True	NA	2	True	AATAAA	-12	NA	77779628	77879539	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_77779737_77783237_77783352_77801330_77801509_77803269_77803407_77806974_77807102_77813733_77813868_77815107_77815232_77843306_77843408_77858937_77859057_77859313_77859387_77860039_77860127_77861223_77861323_77863893_77864029_77866337_77866392_77873000_77873121_77874845
H1_mix_00001228	chr1	+	1725	15	ISM	ENSG00000180488.16	ENST00000642959.1	5149	16	29	5120	16	4622	5prime_fragment	FALSE	canonical	0	0	junction_2	9.72268544409917	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAATGTCAGTGTTAAAT	22	True	NA	NA	False	AGTAAA	-27	NA	77779664	77873258	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_77779737_77783237_77783268_77801330_77801509_77803269_77803407_77806974_77807102_77813733_77813868_77815107_77815232_77843306_77843408_77858937_77859057_77859313_77859387_77860039_77860127_77861223_77861323_77863893_77864029_77866337_77866392_77873003
H1_mix_00001232	chr1	+	3402	3	NIC	ENSG00000162616.9	novel	906	2	NA	NA	0	543	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	55.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATTAAAAGTAGTAATGA	13	False	NA	NA	False	NA	NA	NA	77979280	78018507	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_77979620_78013050_78013620_78016013
H1_mix_00001233	chr1	+	3729	3	FSM	ENSG00000162616.9	ENST00000370763.6	2903	3	-165	-661	-161	661	multi-exon	FALSE	canonical	3	50	junction_1	52.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATAGTTTTGAAGTACTA	NA	False	NA	NA	False	TTTAAA	-38	NA	78004773	78018625	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_78005322_78013050_78013620_78016013
H1_mix_00001237	chr1	+	1497	2	Genic_Genomic	ENSG00000223026.1	novel	308	1	NA	NA	-6161	-46	multi-exon	FALSE	canonical	3	229	junction_1	0	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCTATAATGTAAAGGACT	NA	False	NA	NA	False	AATAAA	-1	NA	81245627	81252050	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_+_81245882_81250807
H1_mix_00001238	chr1	+	1538	3	Genic_Genomic	ENSG00000223026.1	novel	308	1	NA	NA	-6155	-101	multi-exon	FALSE	canonical	3	62	junction_1	78	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACCTGCAAACAGCTCAAA	NA	False	NA	NA	False	NA	NA	NA	81245633	81251995	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_+_81245882_81247888_81247991_81250807
H1_mix_00001242	chr1	+	959	3	Intergenic	novelGene_70	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_1	98.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGTGGTCTCTTCACAC	NA	False	NA	26	True	AATAAA	-26	NA	81245644	81251175	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_81245882_81247636_81247991_81250807
H1_mix_00001246	chr1	+	5737	21	FSM	ENSG00000117114.21	ENST00000674419.1	5736	21	-1	0	-1	0	multi-exon	FALSE	canonical	3	28	junction_1	152.44208736435	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGTAAATAAATGTGAATT	-2	True	NA	-21	True	NA	NA	NA	81800374	81992393	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_81800513_81836884_81837058_81907016_81907231_81936727_81936838_81942968_81943770_81950188_81950483_81951017_81951122_81951956_81952143_81952986_81953026_81955876_81956061_81966057_81966184_81966403_81966610_81968025_81968200_81969177_81969388_81970313_81970535_81971851_81971919_81979868_81979961_81981807_81981977_81984582_81984712_81985258_81985356_81990390
H1_mix_00001247	chr1	+	5892	22	FSM	ENSG00000117114.21	ENST00000370717.6	5873	22	-19	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	178.903133191567	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAACATGTGAACTTTTA	1	True	NA	8	True	AATAAA	-18	NA	81800377	81992422	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_81800513_81836884_81837058_81907016_81907231_81936727_81936838_81942968_81943770_81950188_81950483_81951017_81951122_81951956_81952143_81952986_81953026_81955876_81956061_81966057_81966184_81966403_81966610_81968025_81968200_81969177_81969388_81970313_81970535_81971851_81971919_81979868_81979961_81981807_81981977_81984582_81984712_81985258_81985356_81986900_81987030_81990390
H1_mix_00001250	chr1	+	5794	20	NIC	ENSG00000117114.21	novel	5733	21	NA	NA	-99	0	combination_of_known_junctions	FALSE	canonical	3	209	junction_1	75.3017199702033	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGTAAATAAATGTGAATT	227	False	NA	-21	True	NA	NA	NA	81800834	81992393	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_81801069_81836884_81837058_81907016_81907231_81936727_81936838_81942968_81943770_81950188_81950483_81951017_81951122_81951956_81952143_81955876_81956061_81966057_81966184_81966403_81966610_81968025_81968200_81969177_81969388_81970313_81970535_81971851_81971919_81979868_81979961_81981807_81981977_81984582_81984712_81985258_81985356_81990390
H1_mix_00001253	chr1	+	5124	22	FSM	ENSG00000117114.21	ENST00000674208.1	5124	22	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_20	167.943436109978	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACATTTGTGTCCAACTG	53	False	NA	-46	True	AAGAAA	-32	NA	81800997	81991794	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_81801069_81836884_81837058_81907016_81907231_81936727_81936838_81942968_81943770_81950188_81950483_81951017_81951122_81951956_81952143_81952986_81953026_81955876_81956061_81966057_81966184_81966403_81966610_81968025_81968200_81969177_81969388_81970313_81970535_81971851_81971919_81979868_81979961_81981807_81981977_81984582_81984712_81985258_81985356_81987288_81987342_81990390
H1_mix_00001255	chr1	+	6393	20	NNC	ENSG00000117114.21	novel	4278	20	NA	NA	428	0	at_least_one_novel_splicesite	FALSE	canonical	3	176	junction_1	80.7166996077507	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAACATGTGAACTTTTA	31	False	NA	8	True	AATAAA	-18	NA	81801425	81992422	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_81802230_81836884_81837058_81907016_81907231_81936727_81936838_81942968_81943770_81950188_81950483_81951017_81951122_81951956_81952143_81955876_81956061_81966057_81966184_81966403_81966610_81968025_81968200_81969177_81969388_81970313_81970535_81971851_81971919_81979868_81979961_81981807_81981977_81984582_81984712_81985258_81985356_81990390
H1_mix_00001256	chr1	+	6408	21	NNC	ENSG00000117114.21	novel	4278	20	NA	NA	464	-2	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_19	141.290976357303	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTTAACATGTGAACTTT	9	True	NA	6	True	AATAAA	-16	NA	81801461	81992420	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_81802230_81836884_81837058_81907016_81907231_81936727_81936838_81942968_81943770_81950188_81950483_81951017_81951122_81951956_81952143_81955876_81956061_81966057_81966184_81966403_81966610_81968025_81968200_81969177_81969388_81970313_81970535_81971851_81971919_81979868_81979961_81981807_81981977_81984582_81984712_81985258_81985356_81987288_81987342_81990390
H1_mix_00001258	chr1	+	1905	9	FSM	ENSG00000142875.20	ENST00000370688.7	1905	9	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_8	48.8042966858452	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGATCCTTATATTTA	1	True	NA	NA	False	ATTAAA	-20	NA	84078143	84205439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_84078372_84179176_84179239_84182199_84182329_84184036_84184136_84185099_84185183_84196615_84196743_84197728_84197825_84202682_84202806_84204481
H1_mix_00001259	chr1	+	1426	3	NIC	ENSG00000203943.9	novel	1567	4	NA	NA	56	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCAGTGTATCTTTGATC	NA	False	NA	24	True	AATAAA	-17	NA	84298421	84350798	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_84298568_84325636_84325749_84349630
H1_mix_00001260	chr1	+	1511	4	FSM	ENSG00000203943.9	ENST00000370673.7	1567	4	56	0	56	0	multi-exon	FALSE	canonical	1	2	junction_2	4.02768199119819	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCAGTGTATCTTTGATC	NA	False	NA	24	True	AATAAA	-17	NA	84298421	84350798	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_84298568_84303202_84303288_84325636_84325749_84349630
H1_mix_00001264	chr1	+	2684	4	FSM	ENSG00000142871.18	ENST00000674818.1	3080	4	-15	411	0	228	multi-exon	FALSE	canonical	3	595	junction_2	49.8820831784542	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGCTTGTTTATAACTTT	139	False	NA	NA	False	AATATA	-18	NA	85580899	85584178	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_85581579_85581927_85582285_85582415_85582625_85582739
H1_mix_00001276	chr1	+	6166	22	FSM	ENSG00000065243.20	ENST00000370521.8	6070	22	0	-96	0	96	multi-exon	TRUE	canonical	2	103	junction_12	19.0313025353095	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTGCAATCATATATTGA	1	True	NA	NA	False	TATAAA	-44	NA	88684272	88836351	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_88684629_88740987_88741289_88760221_88760377_88770351_88770470_88771420_88771567_88771662_88771880_88784638_88784825_88786103_88786214_88804390_88804535_88804845_88804922_88805496_88805672_88805890_88806018_88807312_88807444_88807528_88807605_88807683_88807776_88813556_88813734_88821940_88822004_88824309_88824387_88828480_88828624_88832743_88832852_88833076_88833158_88833244
H1_mix_00001284	chr1	+	3778	3	FSM	ENSG00000171492.14	ENST00000337338.9	3950	3	0	172	0	-172	multi-exon	FALSE	canonical	3	186	junction_1	27.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAATGACTTATTAACACA	1	True	NA	NA	False	AATAAA	-24	NA	89821031	89936439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_89821292_89843637_89843783_89933066
H1_mix_00001285	chr1	+	3364	3	FSM	ENSG00000171492.14	ENST00000394593.7	3345	3	-19	0	-19	0	multi-exon	FALSE	canonical	3	15	junction_1	113	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTTTTTTGAGGGGTCT	690	False	NA	20	True	ATTAAA	-20	NA	89821901	89936001	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_89822186_89843637_89843783_89933066
H1_mix_00001289	chr1	+	3215	12	FSM	ENSG00000097046.13	ENST00000234626.11	3215	12	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_1	36.7499929723949	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAGACTACTCATTTGAA	-12	True	NA	20	True	AATAAA	-22	NA	91500850	91525764	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_91500949_91501653_91501832_91507853_91507938_91508261_91508398_91511596_91511691_91511780_91511924_91513057_91513308_91513947_91514044_91514818_91514998_91515793_91515877_91520129_91520280_91524040
H1_mix_00001290	chr1	+	3313	12	FSM	ENSG00000097046.13	ENST00000428239.5	3313	12	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	92.5314331224935	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAGACTACTCATTTGAA	-23	True	NA	20	True	AATAAA	-22	NA	91501107	91525764	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_91501304_91501653_91501832_91507853_91507938_91508261_91508398_91511596_91511691_91511780_91511924_91513057_91513308_91513947_91514044_91514818_91514998_91515793_91515877_91520129_91520280_91524040
H1_mix_00001292	chr1	+	924	6	FSM	ENSG00000189195.15	ENST00000370382.7	1616	6	245	447	205	-447	multi-exon	FALSE	canonical	2	5	junction_2	2.65329983228432	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGTTAATGAAGTAGAAAC	215	False	NA	NA	False	TATAAA	-36	NA	92080549	92139499	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_92080721_92088697_92088896_92102472_92102670_92107883_92108002_92129686_92129777_92139349
H1_mix_00001295	chr1	+	755	5	FSM	ENSG00000122484.9	ENST00000477322.1	755	5	0	0	0	0	multi-exon	TRUE	canonical	3	74	junction_3	12.1449578014911	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTATCCCTAGTACAAG	NA	False	NA	NA	False	NA	NA	NA	92333241	92387233	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_92333474_92336346_92336428_92345845_92345915_92380723_92380874_92387010
H1_mix_00001298	chr1	+	1261	8	FSM	ENSG00000122406.14	ENST00000370321.8	1028	8	0	-233	0	233	multi-exon	FALSE	canonical	3	5357	junction_6	445.802463805096	2062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGGAAATATTTCTTCCA	-1	True	NA	NA	False	NA	NA	NA	92832039	92842157	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_92832118_92833388_92833459_92833544_92833661_92834778_92834914_92836189_92836393_92837455_92837634_92840550_92840640_92841765
H1_mix_00001299	chr1	+	733	4	FSM	ENSG00000122406.14	ENST00000646852.1	733	4	0	0	0	0	multi-exon	FALSE	canonical	3	5895	junction_1	123.348647697852	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTAGACCTTCTGGAATC	14	False	NA	NA	False	ATTAAA	-23	NA	92832085	92835293	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_92832118_92833388_92833459_92833544_92833661_92834778
H1_mix_00001301	chr1	+	273	2	FSM	ENSG00000122406.14	ENST00000644549.1	271	2	0	-2	0	0	multi-exon	FALSE	canonical	3	6864	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGTGTTAAGCTCTTA	1474	False	NA	34	True	AATAAA	-17	NA	92840524	92841923	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_92840640_92841765
H1_mix_00001304	chr1	+	4075	15	FSM	ENSG00000143033.18	ENST00000370298.9	4075	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	161.764126595056	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTGCTTCTG	-2	True	NA	35	True	ATTAAA	-36	NA	93079282	93139076	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_93079532_93110229_93110429_93110544_93110627_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93129277_93129449_93133702_93133809_93133927_93133981_93134090_93134196_93136669
H1_mix_00001305	chr1	+	3908	14	NIC	ENSG00000143033.18	novel	4075	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	130	junction_10	164.237920939581	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTGCTTCTG	-2	True	NA	35	True	ATTAAA	-36	NA	93079282	93139076	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_93079532_93110229_93110429_93110544_93110631_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93133702_93133809_93133927_93133981_93134090_93134196_93136669
H1_mix_00001306	chr1	+	3982	15	NIC	ENSG00000143033.18	novel	4075	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_1	181.794232188876	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTGCTTCTG	-2	True	NA	35	True	ATTAAA	-36	NA	93079282	93139076	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_93079532_93110326_93110429_93110544_93110631_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93129277_93129449_93133702_93133809_93133927_93133981_93134090_93134196_93136669
H1_mix_00001309	chr1	+	5916	5	FSM	ENSG00000143033.18	ENST00000489480.1	1381	5	-152	-4383	-152	2436	multi-exon	FALSE	canonical	3	484	junction_1	73.3246206945525	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAGCAGCTAGTTAAAAGT	3317	False	NA	95	True	AAAAAG	-30	NA	93128642	93141515	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_93129449_93133702_93133809_93133927_93133981_93134090_93134196_93136669
H1_mix_00001313	chr1	+	5756	28	NIC	ENSG00000122483.18	novel	4552	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	19.5606054085915	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAGCCCTTCTAAAAC	47	False	NA	NA	False	AATAAA	-21	NA	93180758	93278607	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_93182483_93183359_93183496_93183977_93184147_93186344_93186504_93191999_93192107_93193615_93193745_93201891_93201989_93205509_93205632_93207106_93207399_93210801_93210927_93212100_93212262_93214742_93214967_93216635_93216747_93217737_93217870_93221608_93221744_93221858_93221937_93226332_93226450_93232425_93232594_93236247_93236391_93239309_93239474_93239682_93239897_93246104_93246205_93246837_93246955_93254470_93254615_93256334_93256539_93258747_93258886_93264700_93264902_93278462
H1_mix_00001314	chr1	+	687	4	FSM	ENSG00000122483.18	ENST00000447456.1	687	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	5.24933858267454	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTGACTTATTTACCTG	NA	False	NA	NA	False	AATAAA	-21	NA	93254516	93264947	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_93254615_93256334_93256539_93258747_93258886_93264700
H1_mix_00001317	chr1	+	3889	15	FSM	ENSG00000137942.18	ENST00000370253.6	3889	15	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_14	66.96877127834	3074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTTAGTGTGTGATCTT	120	False	NA	20	True	AATAAA	-24	NA	93448281	93554661	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_93448306_93499467_93499584_93522081_93522136_93523343_93523492_93524260_93524324_93529651_93529757_93530754_93530884_93532921_93533069_93534704_93534909_93544106_93544217_93546841_93546975_93547346_93547442_93549277_93549427_93550946_93551106_93552408
H1_mix_00001323	chr1	+	1619	4	FSM	ENSG00000235501.7	ENST00000438509.3	1615	4	-5	1	0	0	multi-exon	FALSE	canonical	3	13	junction_3	7.48331477354788	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTGTTACTATGTGCTT	-3	True	NA	13	True	AATAAA	-20	NA	94927360	94963270	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_94928403_94931871_94931986_94961316_94961434_94962924
H1_mix_00001324	chr1	+	1514	4	FSM	ENSG00000235501.7	ENST00000659935.1	1514	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	6.16441400296898	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTGTTACTATGTGCTT	11	True	NA	13	True	AATAAA	-20	NA	94927411	94963270	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_94928403_94931871_94931986_94961316_94961434_94962978
H1_mix_00001328	chr1	+	716	3	NIC	ENSG00000122481.17	novel	1180	4	NA	NA	-35	-3	combination_of_known_splicesites	FALSE	canonical	3	110	junction_1	87.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAAGATTTGTTTTC	13	False	NA	7	True	ATTAAA	-7	NA	95234174	95247214	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_95234316_95246541_95246658_95246755
H1_mix_00001330	chr1	+	1079	3	FSM	ENSG00000122481.17	ENST00000263893.10	1078	3	-1	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	97.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTTTTCATGTTTGCT	1	True	NA	16	True	ATTAAA	-16	NA	95234209	95247223	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_95234316_95244210_95244716_95246755
H1_mix_00001331	chr1	+	1180	4	FSM	ENSG00000122481.17	ENST00000370202.5	1180	4	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	66.5482281256734	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTCATGTTTGCTTT	1	True	NA	18	True	ATTAAA	-18	NA	95234209	95247225	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_95234316_95244210_95244699_95246541_95246658_95246755
H1_mix_00001332	chr1	+	1068	2	FSM	ENSG00000122481.17	ENST00000460571.1	1068	2	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTTTTCATGTTTGCT	NA	False	NA	16	True	ATTAAA	-16	NA	95246057	95247223	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_95246658_95246755
H1_mix_00001337	chr1	+	4781	13	FSM	ENSG00000117569.19	ENST00000675080.1	4780	13	-1	0	0	0	multi-exon	TRUE	canonical	3	96	junction_12	21.2855911096894	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTAGATGCTGTGAAAATA	-2	True	NA	NA	False	CATAAA	-4	NA	96721782	96815029	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_96721873_96723563_96723595_96751424_96751501_96769702_96769876_96770707_96770852_96777584_96777750_96777835_96777947_96785058_96785255_96804799_96806453_96806865_96806959_96812711_96812929_96813028_96813107_96813275
H1_mix_00001338	chr1	+	3322	14	FSM	ENSG00000117569.19	ENST00000674951.1	3321	14	-1	0	0	0	multi-exon	FALSE	canonical	3	96	junction_13	20.9510559533912	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAGCTGGTTTTTTTTAA	-2	True	NA	NA	False	AATAAA	-20	NA	96721782	96815049	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_96721873_96723563_96723595_96751424_96751501_96769702_96769876_96770707_96770852_96777584_96777750_96777835_96777947_96785058_96785255_96804799_96804940_96806418_96806453_96806865_96806959_96812711_96812929_96813028_96813107_96813275
H1_mix_00001339	chr1	+	12001	14	FSM	ENSG00000117569.19	ENST00000609116.5	12014	14	0	13	0	-13	multi-exon	TRUE	canonical	3	83	junction_13	22.3715267047332	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTGTAATTGAGTTTGT	-2	True	NA	2	True	ATTAAA	-2	NA	96721782	96823725	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_96721873_96723563_96723595_96751424_96751501_96769702_96769876_96770707_96770852_96777584_96777750_96777835_96777947_96785058_96785255_96804799_96804940_96806418_96806453_96806865_96806959_96812711_96812929_96813028_96813107_96813272
H1_mix_00001340	chr1	+	3054	14	FSM	ENSG00000117569.19	ENST00000370198.5	3054	14	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_8	31.4578707660912	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGAGGTTTGATGGTTG	25	False	NA	9	True	ATTAAA	-19	NA	96721809	96814793	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_96721873_96723563_96723595_96751424_96751501_96769702_96769876_96770707_96770852_96777584_96777750_96777835_96777947_96785058_96785255_96804784_96804940_96806418_96806453_96806865_96806959_96812711_96812929_96813028_96813107_96813275
H1_mix_00001341	chr1	+	8324	4	NIC	ENSG00000117569.19	novel	779	6	NA	NA	-6363	-3	intron_retention	FALSE	canonical	3	83	junction_3	35.3553390593274	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTGGGAGGTTTGATGG	33	False	NA	6	True	ATTAAA	-16	NA	96800447	96814790	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_96806959_96812711_96812929_96813028_96813107_96813272
H1_mix_00001342	chr1	+	3342	5	ISM	ENSG00000117569.19	ENST00000492905.5	776	6	18310	-1346	-3307	0	3prime_fragment	FALSE	canonical	3	36	junction_1	50.6557005676558	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGAGGTTTGATGGTTG	3089	False	NA	9	True	ATTAAA	-19	NA	96803503	96814793	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_96804940_96806865_96806959_96812711_96812929_96813028_96813107_96813275
H1_mix_00001346	chr1	+	4835	7	FSM	ENSG00000117600.14	ENST00000370185.9	4824	7	-11	0	-11	0	multi-exon	FALSE	canonical	3	11	junction_6	1.7950549357115	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAATAGTTTGGTTTTTA	-8	True	NA	7	True	AATAAA	-22	NA	99264480	99309584	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_99264672_99287964_99288151_99296737_99296868_99299034_99299231_99300908_99300967_99301723_99301898_99305684
H1_mix_00001350	chr1	+	8044	34	FSM	ENSG00000162688.17	ENST00000294724.8	7446	34	-598	0	-470	0	multi-exon	TRUE	canonical	3	27	junction_1	39.4065480987342	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTTGCTTTCATTCAT	NA	False	NA	16	True	AATAAA	-18	NA	99849890	99924020	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_99850899_99850974_99851125_99861502_99861714_99862256_99862424_99864385_99864590_99870399_99870582_99870757_99870870_99874686_99874811_99875153_99875257_99875357_99875456_99876457_99876598_99877640_99877829_99879922_99880047_99880631_99880796_99881075_99881178_99881291_99881448_99881540_99881692_99884119_99884245_99884338_99884452_99884568_99884704_99887977_99888109_99891219_99891357_99891605_99891740_99892431_99892608_99896285_99896389_99900635_99900862_99902682_99902795_99910711_99910848_99912404_99912518_99913526_99913739_99915388_99915487_99916409_99916498_99916597_99916732_99921533
H1_mix_00001356	chr1	+	14327	8	FSM	ENSG00000117620.15	ENST00000533028.8	14321	8	-17	11	0	-11	multi-exon	TRUE	canonical	3	76	junction_7	8.37878759920867	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAACACAAGCACCCAGT	214	False	NA	NA	False	AATAAA	-5	NA	99969978	100035623	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_99970163_99993536_99993742_99999260_99999416_100007033_100007157_100011364_100011534_100015301_100015421_100017681_100017816_100022385
H1_mix_00001360	chr1	+	6149	8	FSM	ENSG00000117620.15	ENST00000370153.6	5708	8	-90	-351	-90	351	multi-exon	FALSE	canonical	3	8	junction_1	31.2200877249091	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCCAGCTACTCAGGAGG	284	False	NA	NA	False	AATAAA	-29	NA	99970345	100027330	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_99970645_99993536_99993742_99999260_99999416_100007033_100007157_100011364_100011534_100015301_100015421_100017681_100017816_100022385
H1_mix_00001361	chr1	+	2795	12	FSM	ENSG00000156875.14	ENST00000370152.8	2779	12	-16	0	-16	0	multi-exon	FALSE	canonical	3	649	junction_6	46.3520484627618	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGATCTGTGAGTTCCT	NA	False	NA	29	True	AATAAA	-34	NA	100038078	100083377	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_100038317_100049908_100050005_100058665_100058729_100059877_100060006_100061834_100061950_100067976_100068196_100068472_100068587_100069613_100069686_100077164_100077278_100078450_100078549_100080495_100080660_100082002
H1_mix_00001365	chr1	+	2526	11	FSM	ENSG00000137996.13	ENST00000370128.9	2526	11	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_2	24.1669195389069	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTTCATTATTCTCTG	-11	True	NA	21	True	AATAAA	-21	NA	100266215	100292769	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_100266421_100266523_100266625_100268151_100268296_100270556_100270681_100273393_100273453_100274823_100274966_100275598_100275724_100277257_100277317_100285227_100285323_100287098_100287204_100291402
H1_mix_00001367	chr1	+	4588	16	FSM	ENSG00000079335.20	ENST00000336454.5	4231	16	-78	-279	-39	279	multi-exon	FALSE	canonical	3	40	junction_2	7.29261422414639	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCCTGATCAGTGTTTTG	60	False	NA	NA	False	AATAAA	-5	NA	100352427	100520556	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_100353004_100353761_100353853_100377545_100377622_100390731_100390825_100424221_100424302_100439931_100439999_100442933_100442997_100455404_100455493_100462650_100462882_100467955_100468095_100484291_100484452_100494817_100494931_100496001_100496050_100498084_100498208_100498928_100499263_100518250
H1_mix_00001376	chr1	+	1939	3	FSM	ENSG00000170989.10	ENST00000561748.2	1971	3	0	32	0	-32	multi-exon	FALSE	canonical	2	2	junction_2	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCCTTGTGGACACAGT	5	True	NA	NA	False	ACTAAA	-30	NA	101236898	101243681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_101237100_101241688_101241773_101242027
H1_mix_00001378	chr1	+	3878	15	NIC	ENSG00000185946.16	novel	3641	16	NA	NA	14	-12	intron_retention	FALSE	canonical	3	31	junction_14	15.7978298690494	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCCAATAAAATAGTGTTT	2	True	NA	NA	False	AATAAA	-9	NA	103525712	103555227	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_103526263_103527694_103527743_103533738_103533858_103534773_103534858_103535329_103535442_103536125_103536195_103537341_103537485_103541349_103541476_103543295_103543448_103544940_103545103_103546247_103546343_103546976_103547036_103550940_103551074_103551720_103551793_103553273
H1_mix_00001380	chr1	+	1492	9	FSM	ENSG00000240038.7	ENST00000491397.1	4716	9	3223	1	-32	0	multi-exon	FALSE	canonical	0	0	junction_7	7.39932429347437	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATAGCCAAGTGTGTTTCT	473	False	NA	NA	False	ATTAAA	-16	NA	103571556	103579529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_103571771_103572109_103572257_103573062_103573261_103573707_103573939_103574259_103574394_103575222_103575346_103575440_103575541_103577719_103577846_103579310
H1_mix_00001386	chr1	+	6989	4	FSM	ENSG00000162636.16	ENST00000483371.1	8333	4	1344	0	1344	0	multi-exon	FALSE	canonical	3	91	junction_2	5.79271573232759	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAGATGTTCTTTATCTT	NA	False	NA	94	True	AATAAA	-16	NA	108626008	108639322	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_108628585_108628676_108628805_108629587_108629658_108635107
H1_mix_00001394	chr1	+	3486	10	ISM	ENSG00000116266.11	ENST00000370008.4	2489	19	33878	0	-1309	0	3prime_fragment	FALSE	canonical	3	313	junction_9	21.0208597162408	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTCTGGTTTGTGTTTTC	NA	False	NA	6	True	AATAAA	-17	NA	108780551	108809523	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_108782518_108782648_108782707_108793581_108793648_108794826_108794908_108796233_108796373_108796619_108796727_108798144_108798238_108800219_108800306_108807400_108807550_108808782
H1_mix_00001395	chr1	+	2866	9	NIC	ENSG00000116266.11	novel	2489	19	NA	NA	-839	-1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_8	115.077080146309	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTATTCTGGTTTGTGTTTT	NA	False	NA	5	True	AATAAA	-16	NA	108781021	108809522	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_108782518_108782648_108782707_108793581_108793648_108794826_108794908_108796233_108796373_108796619_108796727_108798144_108798238_108800219_108800306_108808782
H1_mix_00001400	chr1	+	2485	14	ISM	ENSG00000121957.15	ENST00000642355.1	5609	16	-27	9974	-6	0	5prime_fragment	FALSE	canonical	3	135	junction_1	15.3942277662996	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTTTCAGCTGCTATTC	665	False	NA	10	True	AGTAAA	-18	NA	108876953	108924361	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_108877229_108885274_108885579_108896863_108897086_108897491_108897628_108897958_108898102_108898641_108898766_108898878_108898995_108901789_108901946_108903125_108903235_108904124_108904255_108914337_108914409_108918612_108918790_108922416_108922577_108923999
H1_mix_00001401	chr1	+	636	1	FSM	ENSG00000244716.3	ENST00000414070.1	555	1	-32	-49	-32	49	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGAAAATAGAGGTGAGGA	9529	False	NA	NA	False	AATAAA	-32	NA	108992249	108992885	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_108992200_108992900
H1_mix_00001405	chr1	+	3265	2	FSM	ENSG00000031698.13	ENST00000482384.1	804	2	-92	-2369	-78	2369	multi-exon	FALSE	canonical	3	56	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATACCCAAAAGTTATAT	5249	False	NA	48	True	AATACA	-19	NA	109213839	109217522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_109214129_109214546
H1_mix_00001415	chr1	+	7741	9	FSM	ENSG00000065135.12	ENST00000369851.7	9044	9	0	1303	0	-1303	multi-exon	FALSE	canonical	3	852	junction_1	75.2420053892771	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGCCGGGTAGAGAGG	8	True	NA	NA	False	NA	NA	NA	109548614	109598892	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_109548839_109573736_109573780_109573895_109574038_109579203_109579362_109582436_109582566_109586215_109586346_109586728_109586883_109592042_109592256_109592344
H1_mix_00001416	chr1	+	2318	9	NNC	ENSG00000065135.12	novel	9044	9	NA	NA	28	-6689	at_least_one_novel_splicesite	FALSE	canonical	1	33	junction_8	306.834544176499	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCCCAGGTTTGCTCCTG	36	True	NA	11	True	ATTAAA	-12	NA	109548642	109593506	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_109548839_109573736_109573780_109573895_109574038_109579203_109579362_109582436_109582566_109586215_109586346_109586728_109586883_109592042_109592256_109592353
H1_mix_00001418	chr1	+	4627	13	FSM	ENSG00000116337.20	ENST00000680192.1	4615	13	-12	0	-6	0	multi-exon	FALSE	canonical	3	123	junction_1	20.2297566855253	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATAAAGATTATTTAAGT	3566	False	NA	-7	True	NA	NA	NA	109619824	109632029	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_109620279_109625302_109625434_109625661_109625793_109626159_109626229_109626318_109626428_109626725_109627519_109627773_109627904_109628082_109629236_109629326_109629491_109629795_109629917_109630232_109630407_109630682_109630794_109630942
H1_mix_00001423	chr1	+	1342	8	FSM	ENSG00000168765.18	ENST00000326729.9	1321	8	-21	0	2	0	multi-exon	FALSE	canonical	3	16	junction_7	47.9178719162234	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTATCTTAGTGGTGTC	-13	True	NA	3	True	AATAAA	-17	NA	109656100	109665496	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_109656426_109656711_109656788_109657214_109657280_109657589_109657672_109657771_109657873_109658813_109658910_109658999_109659111_109665010
H1_mix_00001424	chr1	+	1159	7	FSM	ENSG00000168765.18	ENST00000495742.5	1159	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	53.5371107011036	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTATAGTCTTGTCTTA	97	False	NA	13	True	AATAAA	-13	NA	109656251	109661700	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_109656426_109656711_109656788_109657214_109657280_109657771_109657873_109658813_109658910_109658999_109659111_109661164
H1_mix_00001425	chr1	+	1203	8	FSM	ENSG00000213366.13	ENST00000241337.9	1166	8	-37	0	-2	0	multi-exon	FALSE	canonical	3	83	junction_5	11.647895491794	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGTGTGTCTTGTCTT	NA	False	NA	NA	False	AGTAAA	-13	NA	109668019	109675286	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_109668152_109668424_109668501_109668924_109668990_109669289_109669372_109669470_109669572_109671286_109671383_109671472_109671584_109674746
H1_mix_00001432	chr1	+	536	2	FSM	ENSG00000143093.15	ENST00000540970.1	536	2	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCTGATGCCAGAGTTTT	4472	False	NA	NA	False	NA	NA	NA	110039093	110039717	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_110039307_110039394
H1_mix_00001435	chr1	+	18621	4	FSM	ENSG00000116396.15	ENST00000369787.7	18750	4	0	129	0	-129	multi-exon	FALSE	canonical	3	26	junction_3	3.85861230093008	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCTGGCCAAAGCAAGTC	-10	True	NA	NA	False	NA	NA	NA	110211472	110248995	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_110212178_110222963_110223901_110225974_110226179_110232220
H1_mix_00001437	chr1	+	4129	2	FSM	ENSG00000162775.17	ENST00000652747.1	4129	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTTTTTCTGCCTGGA	NA	False	NA	20	True	AATAAA	-16	NA	110338505	110346673	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_110342269_110346307
H1_mix_00001438	chr1	+	3368	1	FSM	ENSG00000162775.17	ENST00000602849.1	3368	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCGATTGGTGTGTAGG	NA	False	NA	NA	False	TATAAA	-23	NA	110339322	110342690	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_110339300_110342700
H1_mix_00001439	chr1	+	3431	3	FSM	ENSG00000162775.17	ENST00000618772.4	3431	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	9.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCCTGGAAGTGAATT	NA	False	NA	28	True	AATAAA	-24	NA	110339322	110346681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_110342269_110345538_110345650_110346307
H1_mix_00001442	chr1	+	563	3	FSM	ENSG00000224699.10	ENST00000590826.3	574	3	0	11	0	-11	multi-exon	FALSE	canonical	2	5	junction_1	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAGAAACAGTACTTACCT	1157	False	NA	-9	True	TATAAA	-16	NA	110408969	110416261	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_110409159_110412172_110412294_110416008
H1_mix_00001444	chr1	+	2211	9	FSM	ENSG00000134255.15	ENST00000357172.9	2203	9	-12	4	-12	0	multi-exon	FALSE	canonical	3	95	junction_4	16.8281757775464	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATTGTTGTGATGTGTCT	-22	True	NA	7	True	AATAAA	-19	NA	111140210	111185100	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_111140308_111147641_111148054_111159379_111159528_111161154_111161297_111174878_111174964_111182186_111182319_111182798_111182958_111183461_111183588_111184190
H1_mix_00001446	chr1	+	2315	6	FSM	ENSG00000173947.14	ENST00000369738.9	2293	6	-22	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	3.2	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTAAAACATACTGTGCCA	-19	True	NA	NA	False	AATAAA	-18	NA	111346599	111353013	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_111346672_111346909_111347050_111347673_111347773_111348515_111348647_111350105_111350224_111351258
H1_mix_00001449	chr1	+	2628	7	FSM	ENSG00000116459.11	ENST00000369722.8	2628	7	0	0	0	0	multi-exon	FALSE	canonical	3	2064	junction_4	71.7280744664644	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGTTTGTGCTAAGCAAC	-18	True	NA	NA	False	ATTAAA	-18	NA	111449463	111462773	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_111449582_111449836_111449874_111454210_111454357_111456085_111456250_111456629_111456756_111459456_111459637_111460916
H1_mix_00001450	chr1	+	1205	8	NNC	ENSG00000116459.11	novel	2628	7	NA	NA	9	92619	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	765.900403819863	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACCAGACATATTTGAAAAA	-8	True	NA	NA	False	NA	NA	NA	111449473	111555392	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_111449582_111449836_111449874_111454210_111454357_111456085_111456250_111456629_111456756_111459456_111459637_111460916_111461331_111555362
H1_mix_00001452	chr1	+	5037	8	FSM	ENSG00000116473.15	ENST00000369709.4	5018	8	-19	0	-7	0	multi-exon	FALSE	canonical	3	166	junction_1	27.7098670998956	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGTGTGACTCTTATTT	-15	True	NA	8	True	AATAAA	-16	NA	111619769	111716691	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_111619935_111691333_111691418_111695340_111695410_111697440_111697498_111703335_111703477_111704342_111704487_111709148_111709265_111712430
H1_mix_00001458	chr1	+	2358	10	FSM	ENSG00000116489.13	ENST00000263168.4	2358	10	0	0	0	0	multi-exon	FALSE	canonical	3	967	junction_9	99.3668847140625	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTGAGTCTCTCCTTTT	5	True	NA	27	True	AATATA	-18	NA	112619831	112671616	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_112619884_112647209_112647274_112649417_112649470_112653597_112653662_112654464_112654672_112659021_112659102_112659700_112659780_112667073_112667146_112669542_112669606_112669991
H1_mix_00001462	chr1	+	3552	21	FSM	ENSG00000155363.19	ENST00000369645.6	3380	21	-172	0	66	0	multi-exon	FALSE	canonical	3	194	junction_1	122.387856832285	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGATAATGTCTCCTCT	8	True	NA	32	True	AAGAAA	-33	NA	112674486	112700739	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_112674730_112674847_112675050_112688934_112689139_112689414_112689651_112689839_112690099_112691664_112691800_112692760_112692930_112694017_112694173_112694452_112694630_112694748_112694897_112695415_112695575_112696147_112696252_112696436_112696535_112696629_112696847_112697993_112698112_112698286_112698479_112698714_112698790_112699684_112699811_112699893_112699983_112700218_112700341_112700415
H1_mix_00001463	chr1	+	4320	21	FSM	ENSG00000155363.19	ENST00000496577.5	4312	21	-8	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	193.803611937446	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAGCCTTGATAATGTCT	-2	True	NA	27	True	AAGAAA	-28	NA	112674697	112700734	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_112674730_112674847_112675050_112686965_112687107_112688327_112689139_112689414_112689651_112689839_112690099_112691664_112691800_112692760_112692930_112694017_112694173_112694452_112694630_112694748_112694897_112695415_112695575_112696147_112696252_112696436_112696535_112696629_112696847_112697993_112698112_112698286_112698790_112699684_112699811_112699893_112699983_112700218_112700341_112700415
H1_mix_00001464	chr1	+	4100	22	FSM	ENSG00000155363.19	ENST00000369644.5	4100	22	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	201.076129804918	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAGCCTTGATAATGTCT	-2	True	NA	27	True	AAGAAA	-28	NA	112674697	112700734	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_112674730_112674831_112675050_112686965_112687107_112688327_112689139_112689414_112689651_112689839_112690099_112691664_112691800_112692760_112692930_112694017_112694173_112694452_112694630_112694748_112694897_112695415_112695575_112696147_112696252_112696436_112696535_112696629_112696847_112697993_112698112_112698286_112698479_112698714_112698790_112699684_112699811_112699893_112699983_112700218_112700341_112700415
H1_mix_00001465	chr1	+	3789	20	FSM	ENSG00000155363.19	ENST00000357443.2	3383	20	-406	0	-82	0	multi-exon	FALSE	canonical	3	392	junction_4	98.5213111639436	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAAACAAAATCTTGTTC	3623	False	NA	3	True	AAGAAA	-4	NA	112674338	112700710	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_112675050_112688934_112689139_112689414_112689651_112689839_112690099_112691664_112691800_112692760_112692930_112694017_112694173_112694452_112694630_112694748_112694897_112695415_112695575_112696147_112696252_112696436_112696535_112696629_112696847_112697993_112698112_112698286_112698479_112698714_112698790_112699684_112699811_112699893_112699983_112700218_112700341_112700415
H1_mix_00001467	chr1	+	1370	5	FSM	ENSG00000155363.19	ENST00000490413.1	1370	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	274.773884312174	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGATAATGTCTCCTCT	4614	False	NA	32	True	AAGAAA	-33	NA	112698307	112700739	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_112698479_112698714_112698790_112699457_112699811_112699893_112700341_112700415
H1_mix_00001473	chr1	+	8801	3	FSM	ENSG00000226419.8	ENST00000428411.6	8803	3	0	2	0	-2	multi-exon	FALSE	canonical	3	15	junction_2	4.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCGCATACTCTGTTCCAG	-10	True	NA	5	True	AATAAA	-17	NA	112956414	112975428	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_112957723_112960476_112960576_112968034
H1_mix_00001474	chr1	+	11583	18	FSM	ENSG00000198799.12	ENST00000361127.6	11566	18	-17	0	-17	0	multi-exon	FALSE	canonical	3	91	junction_11	21.0686799148974	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGGTCTTCTTTTGCC	-37	True	NA	5	True	AATAAA	-17	NA	113073180	113132260	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_113073646_113091317_113091384_113093205_113093281_113093429_113093565_113094338_113094483_113094611_113094756_113095873_113096018_113096221_113096366_113098704_113098786_113100210_113100283_113100419_113100489_113107593_113107758_113110241_113110563_113112478_113112761_113114426_113114877_113116286_113116437_113119232_113119524_113123874
H1_mix_00001479	chr1	+	7135	22	FSM	ENSG00000081026.19	ENST00000369615.5	6508	22	-542	-85	-85	85	multi-exon	FALSE	canonical	2	5	junction_21	10.0348598743786	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAATAGATTTTGTCCCT	NA	False	NA	NA	False	NA	NA	NA	113390429	113686008	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_113391350_113549514_113549632_113580541_113580662_113585386_113585597_113590483_113590659_113594480_113594561_113614600_113614659_113619735_113619831_113622805_113622995_113641910_113642517_113643742_113643775_113646485_113646643_113649236_113649329_113651013_113651207_113653829_113654019_113659079_113659266_113671733_113671837_113672614_113672742_113673321_113673466_113681197_113681337_113682211_113682303_113682896
H1_mix_00001481	chr1	+	3193	3	FSM	ENSG00000118655.7	ENST00000648795.1	1960	3	389	-1622	313	0	multi-exon	TRUE	canonical	3	17	junction_1	25	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGCATTTTTATTTCC	295	False	NA	21	True	AATGAA	-15	NA	113905721	113914086	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_113905776_113908008_113908192_113911130
H1_mix_00001492	chr1	+	1796	3	FSM	ENSG00000163399.16	ENST00000488733.1	1728	3	-68	0	-43	0	multi-exon	FALSE	canonical	3	2312	junction_2	160.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGGAGAGA	-5	True	NA	NA	False	NA	NA	NA	116373200	116386144	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_116373524_116384013_116384125_116384782
H1_mix_00001493	chr1	+	3670	23	FSM	ENSG00000163399.16	ENST00000295598.10	3670	23	0	0	0	0	multi-exon	FALSE	canonical	3	2123	junction_6	227.721670226856	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTGTGCCCTCGTCGC	2	True	NA	15	True	AATAAA	-20	NA	116373243	116404774	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_116373524_116384013_116384125_116384782_116384843_116387287_116387492_116388130_116388245_116388637_116388773_116388901_116389020_116389438_116389708_116390212_116390412_116390781_116390892_116392853_116392989_116393530_116393724_116395109_116395286_116396597_116396735_116397887_116398039_116398620_116398790_116398929_116399085_116399419_116399544_116400860_116401007_116401129_116401261_116401553_116401656_116403883_116403976_116404415
H1_mix_00001507	chr1	+	4822	27	NIC	ENSG00000065183.16	novel	10004	27	NA	NA	0	-5288	combination_of_known_junctions	TRUE	canonical	3	169	junction_1	57.5892412700425	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGGCAACACAGTGAGAC	13	True	NA	NA	False	NA	NA	NA	117929774	117961255	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_117929925_117933287_117933491_117934472_117934683_117936768_117936888_117938479_117938559_117939476_117939573_117940826_117940941_117941123_117941226_117941749_117941848_117942436_117942545_117943395_117943627_117946085_117946180_117948404_117948507_117949750_117949837_117949994_117950131_117950833_117950891_117951975_117952077_117952296_117952409_117952527_117952663_117952945_117952997_117953475_117953542_117954006_117954100_117954579_117954628_117955314_117955359_117957067_117957197_117958909_117959004_117959291
H1_mix_00001510	chr1	+	2831	11	FSM	ENSG00000092621.13	ENST00000642021.1	2794	11	-23	-14	-6	0	multi-exon	TRUE	canonical	3	2286	junction_3	97.7235386178786	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTCTGCACTTTTGTGT	NA	False	NA	15	True	AATAAA	-15	NA	119711877	119744215	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_119712161_119721169_119721322_119723375_119723442_119726850_119726906_119727003_119727103_119734633_119734767_119735294_119735444_119737113_119737267_119740385_119740519_119741766_119743045_119743885
H1_mix_00001511	chr1	+	1866	12	FSM	ENSG00000092621.13	ENST00000641023.2	1866	12	0	0	0	0	multi-exon	FALSE	canonical	3	2286	junction_3	94.1544361739779	931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTCTGCACTTTTGTGT	-3	True	NA	15	True	AATAAA	-15	NA	119711933	119744215	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_119712161_119721169_119721322_119723375_119723442_119726850_119726906_119727003_119727103_119734633_119734767_119735294_119735444_119737113_119737267_119740385_119740519_119741766_119741898_119742806_119743045_119743885
H1_mix_00001516	chr1	+	692	3	FSM	ENSG00000226067.7	ENST00000613486.2	692	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	19.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATTGGTTCTATTATTT	1033	False	NA	NA	False	AATAAA	-28	NA	120913183	120953460	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_120913451_120952438_120952626_120953222
H1_mix_00001517	chr1	+	1261	2	FSM	ENSG00000226067.7	ENST00000659101.1	1261	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATTGGTTCTATTATTT	1061	False	NA	NA	False	AATAAA	-28	NA	120913211	120953460	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_120913451_120952438
H1_mix_00001521	chr1	+	7090	10	FSM	ENSG00000171943.12	ENST00000367123.8	7091	10	-4	5	-4	-5	multi-exon	FALSE	canonical	3	21	junction_6	85.0790482107343	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATGACAAAGAACAGAAATT	-9	True	NA	NA	False	AATAAA	-16	NA	121184970	121392869	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_121185125_121186904_121187514_121284802_121284996_121324477_121324641_121365292_121365356_121373970_121374187_121374825_121374955_121382700_121382926_121386505_121386608_121387633
H1_mix_00001529	chr1	+	1252	3	NIC	ENSG00000215784.6	novel	2423	4	NA	NA	38	-1008	combination_of_known_splicesites	FALSE	canonical	3	15	junction_2	111.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTGGAAAACAAAAATGG	-15	True	NA	NA	False	AATATA	-41	NA	145096011	145111688	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_145097000_145098987_145099066_145111502
H1_mix_00001534	chr1	+	1961	14	FSM	ENSG00000117262.19	ENST00000460277.5	1955	14	-6	0	-4	0	multi-exon	FALSE	canonical	3	26	junction_4	70.5805176196351	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTGCCTTACGTTCATT	-4	True	NA	NA	False	ATTAAA	-16	NA	145607983	145670463	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_145608176_145616233_145616294_145618319_145618424_145623053_145623161_145623592_145623715_145630686_145630808_145631663_145631745_145643868_145643979_145646183_145646273_145647174_145647268_145663328_145663425_145665561_145665652_145669624_145669691_145669833
H1_mix_00001538	chr1	+	3801	15	FSM	ENSG00000186141.9	ENST00000334163.4	3777	15	-24	0	0	0	multi-exon	FALSE	canonical	3	222	junction_2	17.607541287871	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCATGTTCTGTCTCAC	-31	True	NA	NA	False	AATAAA	-18	NA	145824175	145844402	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_145824370_145825756_145825924_145826453_145826710_145826819_145827006_145828748_145828838_145833259_145833365_145833489_145833583_145836493_145836575_145836814_145836867_145837535_145837597_145838055_145838207_145839889_145839992_145840115_145840166_145840921_145841072_145842338
H1_mix_00001539	chr1	+	3672	16	NIC	ENSG00000186141.9	novel	3777	15	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	75	junction_3	44.7160920574337	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCATGTTCTGTCTCAC	-15	True	NA	NA	False	AATAAA	-18	NA	145824191	145844402	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_145824370_145825756_145825924_145826453_145826493_145826605_145826710_145826819_145827006_145828748_145828838_145833259_145833365_145833489_145833583_145836493_145836575_145836814_145836867_145837535_145837597_145838055_145838207_145839889_145839992_145840115_145840166_145840921_145841072_145842338
H1_mix_00001545	chr1	+	1803	2	Genic_Genomic	ENSG00000271121.2	novel	546	1	NA	NA	0	1305	multi-exon	FALSE	canonical	3	146	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGCAACCTCCGCCTCCCA	NA	False	NA	NA	False	NA	NA	NA	146298169	146300020	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_+_146298380_146298427
H1_mix_00001549	chr1	+	6326	34	FSM	ENSG00000268043.8	ENST00000617844.4	6326	34	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_9	42.9739067049289	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGACTTTTGGATTGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	146949313	146996093	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_146949423_146951347_146951490_146959858_146960007_146960108_146960319_146962160_146962264_146963094_146963310_146964356_146964430_146964892_146965105_146966463_146966674_146968447_146968551_146969381_146969597_146970646_146970720_146971182_146971395_146972750_146972961_146974738_146974842_146975676_146975892_146976928_146977002_146977465_146977672_146978958_146979011_146982927_146983092_146984133_146984186_146984812_146984986_146985704_146985757_146986351_146986525_146987233_146987286_146987953_146988127_146988840_146988950_146989573_146989747_146990465_146990518_146991112_146991286_146991994_146992047_146992711_146992885_146993598_146993708_146994331
H1_mix_00001552	chr1	+	1571	2	FSM	ENSG00000180867.11	ENST00000440377.2	1571	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCAGCATACTAATTCCC	25	True	NA	NA	False	TATAAA	-19	NA	147172770	147175205	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_147173560_147174423
H1_mix_00001555	chr1	+	2885	22	FSM	ENSG00000131778.20	ENST00000650721.1	2862	22	-23	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	146.4083996946	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGCTAGTTGCATAATAA	NA	False	NA	-11	True	AATATA	-40	NA	147242653	147295724	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
H1_mix_00001557	chr1	+	2475	21	FSM	ENSG00000131778.20	ENST00000650714.1	2461	21	-14	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	161.127426281189	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGAATCAGGATCTGGT	-37	True	NA	NA	False	AATAGA	-9	NA	147242683	147295585	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
H1_mix_00001558	chr1	+	3203	22	FSM	ENSG00000131778.20	ENST00000651070.1	3189	22	-14	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	172.831849126723	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTGCTAGTTGCATAATA	-37	True	NA	-12	True	AATATA	-39	NA	147242683	147295723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147272170_147272631_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
H1_mix_00001559	chr1	+	2591	19	FSM	ENSG00000131778.20	ENST00000652346.1	2578	19	-13	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	170.486603868942	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCTAATGGTTTTATTG	-37	True	NA	18	True	AATAAA	-6	NA	147242683	147295753	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_147242831_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
H1_mix_00001560	chr1	+	2970	23	FSM	ENSG00000131778.20	ENST00000369258.8	2967	23	-3	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	122.156450288585	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTATTGCTTTCTTTC	-40	True	NA	27	True	AATAAA	-15	NA	147242680	147295762	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
H1_mix_00001561	chr1	+	2782	21	FSM	ENSG00000131778.20	ENST00000467213.5	2782	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	161.423387400959	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTATTGCTTTCTTTC	-37	True	NA	27	True	AATAAA	-15	NA	147242683	147295762	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
H1_mix_00001562	chr1	+	2358	17	FSM	ENSG00000131778.20	ENST00000369259.4	2358	17	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	128.062103464491	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATTGCTTTCTTTCCCT	-37	True	NA	30	True	AATAAA	-18	NA	147242683	147295765	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_147242831_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
H1_mix_00001571	chr1	+	6121	10	NIC	ENSG00000116128.12	novel	5639	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	66	junction_5	21.4476105895272	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTGTCAGAAAAATAAAATAT	7	False	NA	-15	True	ATTAAA	-31	NA	147600195	147626180	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_147600338_147604776_147604912_147606783_147606867_147611577_147611890_147612882_147613200_147614426_147614617_147615802_147615903_147618815_147621058_147622270_147622532_147623841
H1_mix_00001578	chr1	+	3761	1	FSM	ENSG00000177144.8	ENST00000322209.5	3642	1	-122	3	-122	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGCTAAAATATAAAACTT	NA	False	NA	NA	False	AATAAA	-31	NA	148748651	148752412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_148748700_148752400
H1_mix_00001580	chr1	+	8824	17	FSM	ENSG00000178104.19	ENST00000529945.2	8824	17	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_7	20.3867872346282	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTGGTTTTATTCTTAA	194	False	NA	10	True	AATAAA	-22	NA	148952340	148986477	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_148953906_148960653_148960786_148961836_148961957_148962195_148962289_148962427_148962641_148965483_148965643_148966542_148966657_148966838_148966977_148967725_148967906_148968835_148969031_148972179_148972345_148972510_148972593_148974513_148974606_148977936_148978054_148978277_148978416_148979736_148979850_148981269
H1_mix_00001589	chr1	+	1683	3	NIC	ENSG00000277147.7	novel	1260	2	NA	NA	231	0	intron_retention	FALSE	canonical	3	13	junction_2	17.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTTTAAAATTACATTGG	300	False	NA	3	True	AATAAA	-17	NA	149606564	149647610	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_149607555_149646598_149647065_149647383
H1_mix_00001591	chr1	+	1260	2	FSM	ENSG00000277147.7	ENST00000620190.1	1260	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTTTAAAATTACATTGG	114	False	NA	3	True	AATAAA	-17	NA	149607306	149647610	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_149607555_149646598
H1_mix_00001592	chr1	+	729	2	ISM	ENSG00000277147.7	ENST00000610297.2	885	3	40321	14	-33	0	3prime_fragment	FALSE	canonical	3	39	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTTTAAAATTACATTGG	9806	False	NA	3	True	AATAAA	-17	NA	149646565	149647610	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_149647065_149647380
H1_mix_00001599	chr1	+	891	2	FSM	ENSG00000178096.9	ENST00000369152.6	891	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGTTCTTAATGGACT	-4	True	NA	NA	False	ATTAAA	-17	NA	149899567	149900795	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_149899673_149900009
H1_mix_00001606	chr1	+	1436	6	NIC	ENSG00000023902.14	novel	1809	5	NA	NA	-258	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_1	112.329159170716	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATTGCTCTTGCTGATGC	11	True	NA	9	True	GATAAA	-44	NA	150149657	150159630	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_150149787_150150911_150151059_150156065_150156207_150156910_150157016_150157384_150157487_150158818
H1_mix_00001607	chr1	+	2114	6	FSM	ENSG00000023902.14	ENST00000369124.5	2114	6	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_1	25.810075552001	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGCTTCTCATTCCTAG	20	True	NA	4	True	ATTAAA	-16	NA	150149915	150160065	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_150150288_150150911_150151059_150156065_150156207_150156910_150157016_150157384_150157487_150158818
H1_mix_00001609	chr1	+	1807	11	FSM	ENSG00000118298.12	ENST00000369111.9	1788	11	-19	0	-19	0	multi-exon	FALSE	canonical	3	283	junction_8	54.5945052180162	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCCTATCCTTTGAGG	460	False	NA	28	True	ATTAAA	-15	NA	150257754	150265078	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_150258184_150260150_150260172_150261458_150261639_150262157_150262301_150262524_150262621_150262803_150262871_150263041_150263200_150263298_150263420_150263658_150263680_150263793_150263879_150264592
H1_mix_00001610	chr1	+	1708	11	NIC	ENSG00000118298.12	novel	1788	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	131	junction_8	88.843682949324	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCCTATCCTTTGAGG	9	False	NA	28	True	ATTAAA	-15	NA	150257850	150265078	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_150258184_150260150_150260172_150261458_150261639_150262157_150262301_150262524_150262621_150262803_150262871_150263041_150263200_150263298_150263420_150263661_150263680_150263793_150263879_150264592
H1_mix_00001611	chr1	+	1945	8	NIC	ENSG00000118298.12	novel	1788	11	NA	NA	-2258	0	combination_of_known_junctions	FALSE	canonical	3	101	junction_7	117.38702775739	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCCTATCCTTTGAGG	2714	False	NA	28	True	ATTAAA	-15	NA	150260785	150265078	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_150261639_150262157_150262301_150262524_150262621_150262803_150262871_150263041_150263200_150263298_150263420_150263658_150263680_150264592
H1_mix_00001613	chr1	+	624	6	FSM	ENSG00000118292.9	ENST00000369099.8	509	6	-117	2	-107	0	multi-exon	FALSE	canonical	3	87	junction_4	124.425720813665	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGTTACCATCTACTC	NA	False	NA	8	True	AATAAA	-14	NA	150272672	150280914	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_150272864_150274086_150274171_150275740_150275800_150276521_150276633_150279642_150279742_150280834
H1_mix_00001617	chr1	+	1211	6	FSM	ENSG00000159208.16	ENST00000369094.5	1179	6	-32	0	-32	0	multi-exon	FALSE	canonical	3	64	junction_1	20.2049498885793	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGCTGATTGGGGGAA	9718	False	NA	20	True	ATTAAA	-21	NA	150282510	150287093	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_150282619_150283461_150283634_150283804_150283881_150284425_150284505_150284596_150284709_150286429
H1_mix_00001619	chr1	+	1462	2	FSM	ENSG00000266472.6	ENST00000581066.2	1462	2	0	0	0	0	multi-exon	FALSE	canonical	3	3842	junction_1	0	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGAGAAGTAAGGAATTTT	52	False	NA	8	True	AATAAA	-17	NA	150293919	150308979	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_150294450_150308047
H1_mix_00001626	chr1	+	8210	11	FSM	ENSG00000163125.16	ENST00000369068.5	8186	11	-24	0	-24	0	multi-exon	FALSE	canonical	3	38	junction_4	16.3340135912763	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGACATTTTTCTTTGA	420	False	NA	15	True	AATAAA	-16	NA	150364122	150476566	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_150364920_150417595_150417726_150440922_150441024_150441880_150441959_150443230_150443284_150444250_150444378_150446225_150446402_150457287_150457571_150460059_150460318_150464526_150464728_150470560
H1_mix_00001629	chr1	+	2746	18	FSM	ENSG00000143374.18	ENST00000369064.8	2727	18	-19	0	-14	0	multi-exon	FALSE	canonical	3	189	junction_8	37.5484922913877	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGGTCATATGTCTTC	-24	True	NA	15	True	AATAAA	-29	NA	150487399	150507602	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_150487517_150487857_150488055_150488963_150489088_150490600_150490726_150491393_150491512_150491597_150491663_150492410_150492490_150496481_150496629_150496809_150496909_150497529_150497748_150498501_150498665_150498896_150499035_150499215_150499294_150504334_150504436_150504631_150504734_150504905_150504979_150505590_150505706_150506915
H1_mix_00001630	chr1	+	2500	16	FSM	ENSG00000143374.18	ENST00000606933.5	2162	16	-20	-318	-14	0	multi-exon	FALSE	canonical	3	68	junction_7	56.7244411362705	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGGTCATATGTCTTC	-24	True	NA	15	True	AATAAA	-29	NA	150487399	150507602	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_150487517_150487857_150488055_150488963_150489088_150490600_150490726_150491393_150491512_150491597_150491663_150492410_150492490_150497529_150497748_150498501_150498665_150498896_150499035_150499215_150499294_150504334_150504436_150504631_150504734_150504905_150504979_150505590_150505706_150506915
H1_mix_00001631	chr1	+	2711	18	NNC	ENSG00000143374.18	novel	2727	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	72.1109295403238	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGGTCATATGTCTTC	7	True	NA	15	True	AATAAA	-29	NA	150487430	150507602	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_150487517_150487857_150488055_150488963_150489088_150490600_150490726_150491393_150491512_150491597_150491663_150492410_150492490_150496481_150496629_150496809_150496909_150497529_150497748_150498501_150498665_150498896_150499035_150499215_150499294_150504334_150504436_150504635_150504734_150504905_150504979_150505590_150505706_150506915
H1_mix_00001637	chr1	+	1455	9	FSM	ENSG00000143379.13	ENST00000368962.6	1478	9	23	0	9	0	multi-exon	FALSE	canonical	3	9	junction_1	19.6050854372023	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCATGGTTTTGATTTAT	-20	True	NA	11	True	AATAAA	-22	NA	150926371	150945320	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_150926464_150927703_150927975_150929966_150930119_150939939_150939975_150941328_150941429_150942562_150942689_150942851_150943054_150943919_150943994_150944917
H1_mix_00001639	chr1	+	4404	22	FSM	ENSG00000143379.13	ENST00000271640.9	4437	22	33	0	9	0	multi-exon	FALSE	canonical	3	12	junction_11	14.9888847706114	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTGTGGTTTTGTTTCT	-20	True	NA	13	True	GATAAA	-4	NA	150926371	150964735	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_150926518_150927703_150927975_150929966_150930119_150939939_150939975_150941328_150941429_150942562_150942689_150942851_150943054_150943919_150943994_150944917_150945109_150946885_150947013_150949121_150949279_150949369_150949526_150950457_150951091_150951364_150951482_150959177_150959348_150960562_150961192_150962129_150962159_150962586_150962720_150962973_150963140_150963529_150963742_150963994_150964084_150964246
H1_mix_00001642	chr1	+	2605	6	NIC	ENSG00000143363.17	novel	2788	7	NA	NA	-3	-5	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	72.7829650399048	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTTGGGGGTCTTACT	22	True	NA	6	True	ATTAAA	-9	NA	151008473	151035706	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_151008672_151017811_151017905_151025514_151025674_151027232_151027328_151028785_151028945_151033805
H1_mix_00001643	chr1	+	2794	7	FSM	ENSG00000143363.17	ENST00000368936.5	2788	7	-6	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	57.564456626174	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTCTTACTGTCTTTT	25	True	NA	13	True	ATTAAA	-16	NA	151008476	151035713	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_151008672_151017811_151017905_151024610_151024796_151025514_151025674_151027232_151027328_151028785_151028945_151033805
H1_mix_00001644	chr1	+	2933	8	NIC	ENSG00000143363.17	novel	3025	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	61.9664161840418	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGTCTTACTGTCTT	-3	True	NA	11	True	ATTAAA	-14	NA	151008448	151035711	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_151008672_151017811_151017905_151018556_151018670_151024610_151024796_151025514_151025674_151027232_151027328_151028785_151028945_151033805
H1_mix_00001654	chr1	+	3752	15	FSM	ENSG00000143398.20	ENST00000409426.5	3737	15	-15	0	-14	0	multi-exon	TRUE	canonical	3	149	junction_1	99.6848093968675	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATAAACTTTAATGAGTT	-35	True	NA	9	True	TATAAA	-20	NA	151198536	151249504	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_151199082_151224244_151224280_151227319_151227401_151231670_151231802_151232247_151232366_151232550_151232704_151234196_151234497_151236557_151236764_151238181_151238266_151239129_151239179_151239954_151240040_151242122_151242270_151242437_151242568_151246919_151246966_151247862
H1_mix_00001656	chr1	+	3334	16	NIC	ENSG00000143398.20	novel	3800	16	NA	NA	290	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_3	158.242289613814	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTATTTTTTCTGATTC	443	False	NA	36	True	AATAAA	-20	NA	151199014	151249531	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_151199082_151224247_151224280_151224370_151224407_151227319_151227401_151231670_151231802_151232247_151232366_151232550_151232704_151234196_151234497_151236557_151236764_151238181_151238266_151239129_151239179_151239954_151240040_151242122_151242270_151242437_151242568_151246919_151246966_151247862
H1_mix_00001663	chr1	+	5983	9	FSM	ENSG00000143373.18	ENST00000336715.11	4795	9	-41	-1147	-30	1147	multi-exon	FALSE	canonical	3	41	junction_1	10.552695153372	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGGAGGGAGTGGGCCC	657	False	NA	NA	False	NA	NA	NA	151282257	151293323	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_151282396_151286274_151288407_151288527_151288707_151289094_151289272_151289377_151289541_151289677_151290008_151290121_151290235_151290431_151290574_151290714
H1_mix_00001664	chr1	+	487	2	FSM	ENSG00000237976.2	ENST00000455503.2	647	2	24	136	24	-136	multi-exon	FALSE	canonical	3	134	junction_1	0	220	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGGTTTCCCGTGTGT	10	True	NA	24	True	ATTAAA	-26	NA	151346961	151347891	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_151347189_151347631
H1_mix_00001665	chr1	+	931	7	FSM	ENSG00000159377.11	ENST00000290541.7	918	7	-13	0	0	0	multi-exon	FALSE	canonical	3	1399	junction_6	93.8499097258786	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGAGTGGTTTTTGTCT	-9	True	NA	14	True	AATAAA	-14	NA	151399559	151401937	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_151399728_151399980_151400188_151400441_151400589_151400763_151400846_151401238_151401356_151401541_151401631_151401816
H1_mix_00001666	chr1	+	5125	21	FSM	ENSG00000143375.15	ENST00000271636.12	5101	21	-24	0	-24	0	multi-exon	FALSE	canonical	1	75	junction_11	56.2222375933224	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGGTTTGTCTTCTCAT	NA	False	NA	28	True	ATTAAA	-28	NA	151511362	151538692	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_151511516_151518505_151519393_151520165_151520267_151520413_151520484_151520595_151520692_151523433_151523562_151524225_151524359_151524673_151524887_151525641_151525791_151526974_151527108_151529349_151529560_151529908_151530116_151530488_151530747_151532401_151532573_151533974_151534137_151535041_151535132_151535599_151535684_151535779_151535899_151536236_151536346_151536729_151536894_151537204
H1_mix_00001671	chr1	+	7682	12	FSM	ENSG00000143376.14	ENST00000368843.8	7250	12	-81	-351	-58	351	multi-exon	TRUE	canonical	3	13	junction_11	16.1654667130147	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGATCTTAGCAATGGACC	NA	False	NA	NA	False	NA	NA	NA	151611947	151699442	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_151612513_151638887_151639120_151658234_151658428_151660797_151660863_151662165_151662271_151665932_151666012_151668471_151668636_151683355_151683446_151692434_151692585_151692910_151693040_151693423_151693484_151693592
H1_mix_00001672	chr1	+	1371	8	NIC	ENSG00000143376.14	novel	2777	10	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	3	junction_7	20.5545565731389	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTTTACATTTTATTTT	12	False	NA	NA	False	AATAAA	-19	NA	151612202	151669363	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_151612513_151638887_151639120_151658234_151658428_151660797_151660863_151662165_151662271_151665932_151666012_151668471_151668636_151669140
H1_mix_00001681	chr1	+	3548	4	NNC	ENSG00000234614.1	novel	506	3	NA	NA	-1912	1164	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	11.4406682011537	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAAAGTTCTGATTTTTT	9	True	NA	13	True	AGTAAA	-25	NA	151839964	151851549	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_151840430_151841740_151843309_151844044_151844243_151850232
H1_mix_00001682	chr1	+	571	3	FSM	ENSG00000160678.12	ENST00000292169.6	559	3	-12	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	2	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGATGTCTGTCTCCTCTG	0	True	NA	11	True	ATTAAA	-21	NA	153628421	153632039	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153628497_153630508_153630663_153631697
H1_mix_00001688	chr1	+	3154	3	FSM	ENSG00000160679.13	ENST00000495554.1	2553	3	235	-836	230	0	multi-exon	FALSE	canonical	2	22	junction_2	377.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGACTCTCTTTATTTG	233	False	NA	18	True	NA	NA	NA	153634309	153646306	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153634344_153636571_153638449_153645063
H1_mix_00001689	chr1	+	1094	4	FSM	ENSG00000160679.13	ENST00000368687.1	1094	4	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_1	159.345187843527	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGTTTTTTGTTTTTGT	4007	False	NA	-94	True	NA	NA	NA	153638083	153645470	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153638449_153642245_153642430_153643226_153643365_153645063
H1_mix_00001692	chr1	+	992	3	FSM	ENSG00000143553.11	ENST00000462880.1	922	3	-47	-23	-36	0	multi-exon	FALSE	canonical	3	61	junction_1	219	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAAGGTTCCAGGAGTTT	NA	False	NA	42	True	AATAAA	-35	NA	153658666	153661852	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153658887_153659447_153659567_153661199
H1_mix_00001695	chr1	+	5252	30	FSM	ENSG00000143624.14	ENST00000318967.7	5252	30	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_4	62.1395001524106	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGGCTGGCCCCAATT	-14	True	NA	11	True	ATTAAA	-17	NA	153728049	153774808	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153728785_153740650_153740735_153741284_153741369_153746956_153747071_153747278_153747364_153748688_153748756_153751094_153751240_153752278_153752409_153754641_153754740_153757571_153757764_153759525_153759614_153760310_153760391_153760826_153760919_153761569_153761677_153762727_153762848_153763232_153763363_153763831_153763887_153764117_153764222_153764689_153764735_153764943_153765064_153767673_153767828_153768892_153768962_153769768_153769845_153770197_153770312_153770684_153770734_153771795_153771964_153772339_153772441_153772638_153772712_153772924_153773082_153773192
H1_mix_00001696	chr1	+	3404	25	FSM	ENSG00000143624.14	ENST00000476843.5	3404	25	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	82.4592386677604	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGCTGGAGTGTCTGC	281	False	NA	9	True	AATAAA	-16	NA	153751134	153774079	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153751240_153752278_153752409_153754641_153754740_153757571_153757764_153759525_153759614_153760310_153760391_153760826_153760919_153761019_153761110_153761569_153761677_153762727_153762848_153763232_153763363_153763831_153763887_153764117_153764222_153764689_153764735_153764943_153765064_153767673_153767828_153768892_153768962_153769768_153769845_153770197_153770312_153770684_153770734_153771795_153771964_153772339_153772441_153772638_153772712_153772924_153773082_153773192
H1_mix_00001701	chr1	+	4504	2	FSM	ENSG00000143554.14	ENST00000468403.1	4504	2	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATCTGTCATTATCTCTC	22	True	NA	50	True	AATAAA	-36	NA	153775318	153780156	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153776728_153777061
H1_mix_00001711	chr1	+	1750	10	FSM	ENSG00000143578.16	ENST00000271889.8	1750	10	0	0	0	0	multi-exon	TRUE	canonical	3	50	junction_1	43.7975138817516	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTATCCCAGAAGTTTGAA	22	False	NA	20	True	AATAAA	-15	NA	153967920	153974359	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153968185_153968521_153968700_153968929_153969177_153969333_153969456_153972743_153972837_153972971_153973079_153973194_153973264_153973379_153973465_153973619_153973717_153973871
H1_mix_00001712	chr1	+	1557	10	FSM	ENSG00000143578.16	ENST00000368603.5	1557	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	49.4483144552889	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTATCCCAGAAGTTT	338	False	NA	17	True	AATAAA	-12	NA	153968236	153974356	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153968311_153968521_153968700_153968929_153969177_153969333_153969456_153972743_153972837_153972971_153973079_153973194_153973264_153973379_153973465_153973619_153973717_153973871
H1_mix_00001713	chr1	+	1502	10	FSM	ENSG00000143578.16	ENST00000368600.7	1496	10	-6	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	55.6891726515782	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATCCCAGAAGTTTGAAAT	338	False	NA	22	True	AATAAA	-17	NA	153968236	153974361	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153968311_153968521_153968640_153968929_153969177_153969333_153969456_153972743_153972837_153972971_153973079_153973194_153973264_153973379_153973465_153973619_153973717_153973871
H1_mix_00001719	chr1	+	496	3	FSM	ENSG00000177954.14	ENST00000477151.2	496	3	0	0	0	0	multi-exon	FALSE	canonical	3	21616	junction_2	4418	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATCCTGTTTATTGTCTT	130	False	NA	12	True	AATAAA	-12	NA	153990920	153992146	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153991224_153991565_153991677_153992064
H1_mix_00001722	chr1	+	3450	25	FSM	ENSG00000143569.19	ENST00000613315.4	3451	25	0	1	0	-1	multi-exon	FALSE	canonical	3	24	junction_5	294.636496263711	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCGTTCTTTCCGTGC	543	False	NA	26	True	AATAAA	-22	NA	154220848	154263504	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_154220976_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234739_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154263102
H1_mix_00001723	chr1	+	3997	27	FSM	ENSG00000143569.19	ENST00000271877.11	3997	27	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_26	345.096719141359	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAGTGGCTTCTTGGATGC	543	False	NA	33	True	AAAACA	-40	NA	154220848	154271509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_154220976_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234793_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154266500_154266569_154268756_154268955_154270880
H1_mix_00001724	chr1	+	3947	27	FSM	ENSG00000143569.19	ENST00000428931.6	3877	27	-70	0	0	0	multi-exon	FALSE	canonical	3	341	junction_26	264.541830676199	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCAGCCTCTGCCTATTC	579	False	NA	7	True	TATAAA	-14	NA	154220884	154270847	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_154220976_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154266500_154266569_154268756_154268955_154270199
H1_mix_00001726	chr1	+	3429	25	NIC	ENSG00000143569.19	novel	3451	25	NA	NA	2	-8	combination_of_known_junctions	FALSE	canonical	3	445	junction_1	218.261295367629	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTAACTCTGGCGTTCTT	11	True	NA	19	True	AATAAA	-15	NA	154220948	154263497	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_154221041_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154263102
H1_mix_00001727	chr1	+	3435	25	NIC	ENSG00000143569.19	novel	3451	25	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	727	junction_24	179.918326378017	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCGTTCTTTCCGTGC	579	False	NA	26	True	AATAAA	-22	NA	154220884	154263504	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_154220976_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154263102
H1_mix_00001729	chr1	+	3973	28	NIC	ENSG00000143569.19	novel	3864	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	209	junction_25	372.322533010165	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCAGCCTCTGCCTATTC	149	False	NA	7	True	TATAAA	-14	NA	154221327	154270847	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_154221397_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154266500_154266569_154268759_154268955_154269361_154269413_154270199
H1_mix_00001730	chr1	+	3369	24	NIC	ENSG00000143569.19	novel	3411	25	NA	NA	2	-9	combination_of_known_junctions	FALSE	canonical	3	179	junction_4	261.838605970471	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTAACTCTGGCGTTCT	3336	False	NA	18	True	AATAAA	-14	NA	154225083	154263496	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_154225214_154227281_154227360_154228614_154228726_154234590_154234793_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154263102
H1_mix_00001731	chr1	+	3864	26	FSM	ENSG00000143569.19	ENST00000361546.6	3864	26	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_25	257.765549288496	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGCCTATTCTTGCTC	3334	False	NA	13	True	TATAAA	-20	NA	154225081	154270853	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_154225214_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154266500_154266569_154268756_154268955_154270199
H1_mix_00001732	chr1	+	3852	26	NIC	ENSG00000143569.19	novel	3877	27	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	209	junction_24	297.261635600694	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCAGCCTCTGCCTATTC	3337	False	NA	7	True	TATAAA	-14	NA	154225084	154270847	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_154225214_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154266500_154266569_154268759_154268955_154270199
H1_mix_00001733	chr1	+	3855	26	NNC	ENSG00000143569.19	novel	3864	26	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_16	362.053596032411	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTGGCTTCTTGGATGCT	3337	False	NA	34	True	AAAACA	-41	NA	154225084	154271510	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_154225214_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255664_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154266500_154266569_154268756_154268955_154270880
H1_mix_00001739	chr1	+	2254	7	ISM	ENSG00000143569.19	ENST00000428595.1	1419	10	2656	-945	-9	0	3prime_fragment	FALSE	canonical	3	271	junction_6	480.734420791078	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAGTGGCTTCTTGGATGC	2640	False	NA	33	True	AAAACA	-40	NA	154259726	154271509	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_154260030_154260891_154261110_154261591_154261698_154266500_154266569_154268756_154268955_154269361_154269413_154270199
H1_mix_00001744	chr1	+	1118	7	FSM	ENSG00000143575.15	ENST00000328703.12	1109	7	-9	0	0	0	multi-exon	FALSE	canonical	3	579	junction_4	39.5281193863586	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTCTTGGTTTTGTC	-15	True	NA	29	True	AATAAA	-18	NA	154272619	154275875	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_154272777_154273335_154273599_154273773_154273962_154274949_154275002_154275153_154275261_154275392_154275484_154275615
H1_mix_00001745	chr1	+	1293	6	FSM	ENSG00000143575.15	ENST00000531435.5	1284	6	-9	0	0	0	multi-exon	FALSE	canonical	3	579	junction_3	38.8978148486518	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTCTTGGTTTTGTC	-15	True	NA	29	True	AATAAA	-18	NA	154272619	154275875	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_154272777_154273335_154273962_154274949_154275002_154275153_154275261_154275392_154275484_154275615
H1_mix_00001752	chr1	+	1745	8	FSM	ENSG00000160688.19	ENST00000315144.14	1730	8	-15	0	0	0	multi-exon	FALSE	canonical	3	508	junction_3	124.384197434516	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGCTCTAGCTGTGTC	-5	True	NA	22	True	AATAAA	-18	NA	154983343	154993111	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_154983398_154983841_154984067_154988104_154988850_154989559_154989708_154990158_154990258_154990338_154990529_154992712_154992787_154992901
H1_mix_00001753	chr1	+	757	3	FSM	ENSG00000160688.19	ENST00000487371.1	757	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	432.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGCACTGGTCAACCTT	44	False	NA	NA	False	NA	NA	NA	154983430	154988433	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_154983634_154983841_154984067_154988104
H1_mix_00001754	chr1	+	1211	4	FSM	ENSG00000160688.19	ENST00000295530.6	1211	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	35.3647658929996	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGCTCTAGCTGTGTC	1330	False	NA	22	True	AATAAA	-18	NA	154988056	154993111	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_154988850_154990158_154990258_154992564_154992674_154992901
H1_mix_00001760	chr1	+	2874	22	FSM	ENSG00000143537.14	ENST00000359280.8	2874	22	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_19	26.3834449570266	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATCTTGGGAGCGTTCCC	-34	True	NA	13	True	AATAAA	-4	NA	155051285	155062758	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155051466_155052670_155052778_155053416_155053494_155053909_155053989_155054149_155054227_155054313_155054507_155055789_155055853_155055931_155056001_155056079_155056250_155056385_155056471_155056952_155057102_155057187_155057363_155057636_155057730_155057850_155058156_155058245_155058442_155058709_155058788_155059901_155059975_155060204_155060344_155060762_155060833_155061903_155061976_155062244_155062370_155062459
H1_mix_00001761	chr1	+	2877	22	FSM	ENSG00000143537.14	ENST00000355956.6	2877	22	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_20	33.1719904796344	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATCTTGGGAGCGTTCCC	-34	True	NA	13	True	AATAAA	-4	NA	155051285	155062758	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155051466_155052670_155052778_155053416_155053494_155053909_155053989_155054149_155054227_155054313_155054507_155055789_155055853_155055931_155056001_155056079_155056250_155056385_155056471_155056952_155057102_155057187_155057363_155057636_155057730_155057850_155058156_155058245_155058442_155058709_155058788_155059901_155059975_155060204_155060344_155060762_155060833_155061414_155061490_155062244_155062370_155062459
H1_mix_00001762	chr1	+	2819	21	FSM	ENSG00000143537.14	ENST00000271836.10	2799	21	-20	0	0	0	multi-exon	FALSE	canonical	3	31	junction_19	24.131462864899	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGAGTTTGTCTGCTTC	-34	True	NA	30	True	AATAAA	-21	NA	155051285	155062775	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155051466_155052670_155052778_155053416_155053494_155053909_155053989_155054149_155054227_155054313_155054507_155055789_155055853_155055931_155056001_155056079_155056250_155056385_155056471_155056952_155057102_155057187_155057363_155057636_155057730_155057850_155058156_155058245_155058442_155058709_155058788_155059901_155059975_155060204_155060344_155060762_155060833_155062244_155062370_155062459
H1_mix_00001763	chr1	+	2936	23	FSM	ENSG00000143537.14	ENST00000356955.7	2936	23	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_19	27.0718740325889	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGAGTTTGTCTGCTTC	-4	True	NA	30	True	AATAAA	-21	NA	155051315	155062775	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155051466_155052670_155052778_155053416_155053494_155053909_155053989_155054149_155054227_155054313_155054507_155055789_155055853_155055931_155056001_155056079_155056250_155056385_155056471_155056952_155057102_155057187_155057363_155057636_155057730_155057850_155058156_155058245_155058442_155058709_155058788_155059901_155059975_155060204_155060344_155060762_155060833_155061414_155061490_155061903_155061976_155062244_155062370_155062459
H1_mix_00001764	chr1	+	3033	22	FSM	ENSG00000143537.14	ENST00000527418.5	4508	22	1475	0	1067	0	multi-exon	FALSE	canonical	3	53	junction_18	25.7039661832765	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGAGTTTGTCTGCTTC	1101	False	NA	30	True	AATAAA	-21	NA	155052420	155062775	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155052778_155053416_155053494_155053909_155053989_155054149_155054227_155054313_155054507_155055789_155055853_155055931_155056001_155056079_155056250_155056385_155056471_155056952_155057102_155057187_155057363_155057636_155057730_155057850_155058156_155058245_155058442_155058709_155058788_155059901_155059975_155060204_155060344_155060762_155060833_155061417_155061490_155061903_155061976_155062244_155062370_155062459
H1_mix_00001766	chr1	+	1272	4	FSM	ENSG00000243364.8	ENST00000368409.8	1254	4	-18	0	-15	0	multi-exon	FALSE	canonical	3	87	junction_3	8.33999733546454	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTGCCCTCAGGCCACT	3	True	NA	35	True	AATAAA	-29	NA	155063721	155069553	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155063937_155066729_155067017_155067371_155067441_155068852
H1_mix_00001767	chr1	+	1834	5	FSM	ENSG00000143590.14	ENST00000368408.4	1817	5	-17	0	-17	0	multi-exon	FALSE	canonical	3	115	junction_2	9.86154146165801	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTGTGTGTGATTTCAA	3092	False	NA	NA	False	AATAAA	-17	NA	155078819	155087538	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155079070_155085090_155085405_155085876_155085943_155086127_155086206_155086412
H1_mix_00001768	chr1	+	1909	4	FSM	ENSG00000143590.14	ENST00000498667.1	776	4	-518	-615	-512	0	multi-exon	FALSE	canonical	3	25	junction_1	52.6898683071254	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTGTGTGTGATTTCAA	6095	False	NA	NA	False	AATAAA	-17	NA	155085003	155087538	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155085643_155085876_155085943_155086127_155086206_155086412
H1_mix_00001773	chr1	+	1137	5	FSM	ENSG00000169241.19	ENST00000303343.12	1137	5	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	138.400686414483	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGATGGTTCATTCTCTA	3	True	NA	13	True	AATAAA	-18	NA	155135849	155138852	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155135992_155136298_155136377_155136827_155136952_155137978_155138099_155138179
H1_mix_00001774	chr1	+	1300	6	FSM	ENSG00000169241.19	ENST00000368404.9	1298	6	-2	0	0	0	multi-exon	FALSE	canonical	3	189	junction_3	90.4070793688193	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGATGGTTCATTCTCTAC	3	True	NA	14	True	AATAAA	-19	NA	155135849	155138853	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155135992_155136298_155136377_155136827_155136952_155137560_155137723_155137978_155138099_155138179
H1_mix_00001781	chr1	+	3060	7	FSM	ENSG00000173171.15	ENST00000481771.5	2579	7	-565	84	-9	0	multi-exon	FALSE	canonical	3	750	junction_5	38.9001570976548	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCAGAGGCCCCCGTGC	NA	False	NA	NA	False	NA	NA	NA	155208685	155213739	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155209333_155210345_155210416_155210547_155212220_155212384_155212568_155212693_155212771_155213236_155213392_155213483
H1_mix_00001789	chr1	+	1256	10	FSM	ENSG00000160752.15	ENST00000447866.5	1256	10	0	0	0	0	multi-exon	FALSE	canonical	3	813	junction_1	481.97359181793	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGAGATTGCAAGGGCGG	-3	True	NA	-43	True	GGGGCT	-32	NA	155308793	155320609	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155308966_155310042_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
H1_mix_00001791	chr1	+	1429	11	FSM	ENSG00000160752.15	ENST00000368356.9	1417	11	-12	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	891.714393738264	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGTTCTGTTCTTGCT	-41	True	NA	13	True	AATAAA	-16	NA	155308853	155320665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155308966_155309788_155309966_155310042_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
H1_mix_00001793	chr1	+	1178	10	FSM	ENSG00000160752.15	ENST00000467076.5	1178	10	0	0	0	0	multi-exon	FALSE	canonical	3	963	junction_1	436.07086863162	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATCGTGTAACCTTCT	-6	True	NA	-5	True	NA	NA	NA	155308888	155320647	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155308966_155310063_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
H1_mix_00001795	chr1	+	1480	11	FSM	ENSG00000160752.15	ENST00000356657.10	1478	11	-2	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	894.955105019241	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGTTCTGTTCTTGCT	19	True	NA	13	True	AATAAA	-16	NA	155308913	155320665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155309077_155309788_155309966_155310042_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
H1_mix_00001800	chr1	+	2503	9	FSM	ENSG00000160753.16	ENST00000368347.8	2503	9	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	86.1560176366109	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTTCACTGTGGG	12	True	NA	24	True	AATAAA	-15	NA	155323936	155331114	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155324545_155324844_155324944_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326579_155327133_155328149_155328276_155330402
H1_mix_00001801	chr1	+	1958	9	NIC	ENSG00000160753.16	novel	1968	9	NA	NA	-76	-3	combination_of_known_junctions	FALSE	canonical	3	41	junction_6	114.687619209747	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAATGTGTGTCTTTCACT	240	False	NA	19	True	AATAAA	-10	NA	155324201	155331109	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_155324588_155324844_155324944_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326897_155327133_155328149_155328276_155330402
H1_mix_00001802	chr1	+	1709	8	FSM	ENSG00000160753.16	ENST00000490373.5	1700	8	-9	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	91.0478681008748	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCCACCTGTAAGGTGAAA	5	True	NA	20	True	AATAAA	-20	NA	155324512	155330730	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155324810_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326579_155327133_155328149_155328276_155330402
H1_mix_00001803	chr1	+	1968	9	FSM	ENSG00000160753.16	ENST00000368349.8	1968	9	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	77.5914782692017	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTGTCTTTCACTGTG	5	True	NA	22	True	AATAAA	-13	NA	155324512	155331112	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155324588_155324844_155324944_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326579_155327133_155328149_155328276_155330402
H1_mix_00001804	chr1	+	1749	8	FSM	ENSG00000160753.16	ENST00000471876.5	1749	8	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_5	127.110429251458	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTTCACTGTGGG	31	True	NA	24	True	AATAAA	-15	NA	155324538	155331114	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155324810_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326897_155327133_155328149_155328276_155330402
H1_mix_00001805	chr1	+	2163	8	FSM	ENSG00000160753.16	ENST00000292254.8	2163	8	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_1	39.3259534181296	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTTCACTGTGGG	20	False	NA	24	True	AATAAA	-15	NA	155324576	155331114	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155324944_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326579_155327133_155328149_155328276_155330402
H1_mix_00001808	chr1	+	2423	14	NIC	ENSG00000125459.17	novel	2438	14	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_13	42.0011270629279	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATTGATTTGCAAAATC	NA	False	NA	9	True	NA	NA	NA	155610195	155614933	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_155610333_155610424_155610561_155611038_155611109_155611215_155611292_155611548_155611604_155611688_155611828_155611982_155612101_155612181_155612317_155612417_155612571_155612843_155612976_155613048_155613234_155613461_155613567_155613656_155613767_155614061
H1_mix_00001811	chr1	+	1804	5	ISM	ENSG00000125459.17	ENST00000483734.5	2490	13	1846	-2	0	0	intron_retention	FALSE	canonical	3	181	junction_2	18.7533330370897	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATTGATTTGCAAAATC	2229	False	NA	9	True	NA	NA	NA	155612465	155614933	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_155612571_155612843_155612976_155613048_155613234_155613461_155613567_155613656
H1_mix_00001817	chr1	+	2064	13	FSM	ENSG00000132676.16	ENST00000368336.10	2056	13	-8	0	0	0	multi-exon	FALSE	canonical	3	349	junction_3	29.6660814549021	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATACTGTACTGTTTTAC	-4	True	NA	NA	False	AATAAA	-32	NA	155689082	155739010	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155689175_155709772_155709825_155717005_155717129_155721516_155721619_155725381_155725491_155725926_155726020_155727607_155727739_155729041_155729123_155729207_155729367_155731355_155731416_155731943_155732034_155736945_155737064_155738156
H1_mix_00001818	chr1	+	1902	12	FSM	ENSG00000132676.16	ENST00000535183.5	1894	12	-8	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	104.543003923847	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	-4	True	NA	NA	False	NA	NA	NA	155689082	155738971	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155689175_155709772_155709825_155721516_155721619_155725381_155725491_155725926_155726020_155727607_155727739_155729041_155729123_155729207_155729367_155731355_155731416_155731943_155732034_155736945_155737064_155738156
H1_mix_00001819	chr1	+	1649	13	FSM	ENSG00000132676.16	ENST00000343043.7	1649	13	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	92.5021020782171	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGTTGTGTTAGATTAA	-4	True	NA	15	True	AATAAA	-11	NA	155689082	155738526	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155689244_155709772_155709825_155717005_155717129_155721516_155721619_155725381_155725491_155725926_155726020_155727607_155727739_155729041_155729123_155729207_155729367_155731355_155731416_155731943_155732034_155736945_155737064_155738156
H1_mix_00001821	chr1	+	679	2	FSM	ENSG00000132676.16	ENST00000476444.1	679	2	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTGTGTTAGATTAATAA	NA	False	NA	18	True	AATAAA	-14	NA	155736757	155738529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155737064_155738156
H1_mix_00001824	chr1	+	576	3	FSM	ENSG00000116586.12	ENST00000368304.9	521	3	-43	-12	-33	12	multi-exon	FALSE	canonical	3	104	junction_2	791.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCTTGGATGGGAGGAA	3	True	NA	49	True	AATAAA	-28	NA	156054748	156058518	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156054958_156055262_156055426_156058314
H1_mix_00001828	chr1	+	875	4	FSM	ENSG00000132698.15	ENST00000473336.5	681	4	-194	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	50.1752484354144	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGTCATTCCACTGCC	19	True	NA	25	True	AATAAA	-16	NA	156061188	156070504	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156061444_156068269_156068464_156069670_156069752_156070159
H1_mix_00001830	chr1	+	2938	10	FSM	ENSG00000160789.24	ENST00000677389.1	2029	10	-931	22	-471	0	multi-exon	FALSE	canonical	3	142	junction_5	19.7002224716397	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGAATGTTTTGGAACTT	7063	False	NA	-6	True	NA	NA	NA	156113779	156137844	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156115275_156130616_156130774_156134402_156134529_156134804_156134976_156135186_156135313_156135900_156136122_156136213_156136437_156136920_156137029_156137112_156137233_156137653
H1_mix_00001831	chr1	+	3178	12	FSM	ENSG00000160789.24	ENST00000368300.9	3178	12	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_11	54.8953926320908	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCTGCTGTGGTGTC	1	True	NA	18	True	AATACA	-14	NA	156114710	156140081	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156115275_156130616_156130774_156134402_156134529_156134804_156134976_156135186_156135313_156135900_156136122_156136213_156136437_156136920_156137029_156137112_156137233_156137653_156137744_156138487_156138758_156139079
H1_mix_00001835	chr1	+	3249	14	FSM	ENSG00000196189.14	ENST00000368282.1	3249	14	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	7.54003123374944	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGCTGTGTTTGCTGGAG	610	False	NA	20	True	ATTAAA	-22	NA	156154370	156177752	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156154718_156156413_156156575_156158069_156158133_156158387_156158487_156158718_156158825_156160442_156160560_156160904_156161030_156161345_156161519_156162943_156163095_156172825_156173007_156174821_156174941_156175085_156175244_156175555_156175657_156176404
H1_mix_00001837	chr1	+	6964	3	FSM	ENSG00000160785.14	ENST00000469537.1	6952	3	-12	0	-12	0	multi-exon	FALSE	canonical	3	195	junction_1	5	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGGCTTGCGCGTATT	2083	False	NA	13	True	ATTAAA	-20	NA	156196192	156212795	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156200473_156207885_156208014_156210239
H1_mix_00001838	chr1	+	908	5	FSM	ENSG00000160783.19	ENST00000368273.8	884	5	-24	0	-11	0	multi-exon	FALSE	canonical	0	0	junction_2	602.015988159783	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTTCTCTAGGTTCAG	NA	False	NA	NA	False	NA	NA	NA	156212981	156239851	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156213177_156225556_156225669_156233627_156233729_156236287_156236484_156239547
H1_mix_00001839	chr1	+	1087	5	FSM	ENSG00000160783.19	ENST00000368277.3	1068	5	-19	0	-5	0	multi-exon	FALSE	canonical	3	1107	junction_4	79.9874990232849	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGAGCATGCTTCCTCT	-13	True	NA	33	True	AATAAA	-21	NA	156212987	156240042	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156213177_156232319_156232426_156233627_156233729_156236287_156236484_156239547
H1_mix_00001841	chr1	+	1037	7	FSM	ENSG00000260238.6	ENST00000490491.5	1007	7	-45	15	-45	-4	multi-exon	TRUE	canonical	3	81	junction_6	600.64088457432	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGGGCCTGTGAGTCTG	NA	False	NA	15	True	AATAAA	-15	NA	156212936	156243317	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156213177_156232319_156232426_156233627_156233729_156236287_156236484_156242552_156242592_156242761_156242832_156243032
H1_mix_00001843	chr1	+	2214	2	FSM	ENSG00000242252.2	ENST00000471413.1	931	2	-1245	-38	-1240	10	multi-exon	FALSE	canonical	3	94	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTCTGTCCAGTTTAT	1270	False	NA	25	True	AATAAA	-25	NA	156240943	156243327	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156242592_156242761
H1_mix_00001844	chr1	+	2171	4	FSM	ENSG00000163472.19	ENST00000405535.3	2155	4	-16	0	-5	0	multi-exon	FALSE	canonical	2	3	junction_1	3.85861230093008	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGGCTCTTTTTTCCT	-18	True	NA	13	True	AATAAA	-13	NA	156284308	156292443	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156284407_156285183_156285984_156286259_156286474_156291384
H1_mix_00001847	chr1	+	657	4	FSM	ENSG00000163467.12	ENST00000368254.6	595	4	-67	5	-44	0	multi-exon	FALSE	canonical	3	8	junction_3	2.94392028877595	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGTTATTGTGTTGTTT	-70	True	NA	NA	False	AGTAAA	-12	NA	156338458	156346990	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156338606_156339633_156339792_156344579_156344709_156346767
H1_mix_00001851	chr1	+	1125	6	FSM	ENSG00000163382.13	ENST00000368235.8	1111	6	-14	0	0	0	multi-exon	FALSE	canonical	3	1745	junction_3	73.963774917185	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTTGTGCTGTCCTTTA	-20	True	NA	28	True	AATGAA	-21	NA	156591761	156594299	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156591987_156592100_156592210_156592364_156592476_156592556_156592671_156593407_156593556_156593881
H1_mix_00001852	chr1	+	6331	5	FSM	ENSG00000163382.13	ENST00000680529.1	6317	5	-14	0	0	0	multi-exon	FALSE	canonical	3	1745	junction_2	73.6117347981964	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCACTTGAGCCCAGGAG	-20	True	NA	NA	False	NA	NA	NA	156591761	156599350	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156591987_156592100_156592476_156592556_156592671_156593407_156593556_156593881
H1_mix_00001861	chr1	+	470	3	FSM	ENSG00000143294.15	ENST00000473387.1	452	3	-18	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	508	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCCCTGAAGAGCTGCCT	-3	True	NA	NA	False	NA	NA	NA	156767534	156786980	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156767584_156782281_156782330_156786607
H1_mix_00001862	chr1	+	2068	7	FSM	ENSG00000143294.15	ENST00000271526.9	2068	7	0	0	0	0	multi-exon	FALSE	canonical	3	1011	junction_1	147.231582511664	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGCCTGCCCTGTCCCTG	-3	True	NA	17	True	AATAAA	-18	NA	156767534	156800815	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156768240_156782281_156782330_156786607_156787175_156791696_156791793_156794664_156794809_156797275_156797342_156800373
H1_mix_00001865	chr1	+	2159	2	FSM	ENSG00000143294.15	ENST00000469071.1	1969	2	-140	-50	-140	47	multi-exon	FALSE	canonical	3	1337	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCAAATGATCTTGAGCT	2145	False	NA	64	True	NA	NA	NA	156795671	156800862	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156797342_156800373
H1_mix_00001893	chr1	+	1058	5	FSM	ENSG00000162755.14	ENST00000490724.6	1038	5	-20	0	-20	0	multi-exon	FALSE	canonical	3	39	junction_1	21.569654610123	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCTGCTTCACTTCAAAT	-14	True	NA	-29	True	TATAAA	-16	NA	161098340	161100298	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161098405_161098665_161099063_161099345_161099506_161099597_161099797_161100060
H1_mix_00001894	chr1	+	1367	4	FSM	ENSG00000162755.14	ENST00000368011.9	1347	4	-20	0	-20	0	multi-exon	FALSE	canonical	3	68	junction_2	12.2836838484589	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTCTCTGAAATTTTT	-14	True	NA	19	True	ATTAAA	-19	NA	161098340	161100346	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161099063_161099345_161099506_161099597_161099797_161100060
H1_mix_00001895	chr1	+	1345	4	FSM	ENSG00000162755.14	ENST00000392192.6	1333	4	-12	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	39.9694327649962	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTCTCTGAAATTTTT	27	True	NA	19	True	ATTAAA	-19	NA	161098381	161100346	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161099063_161099345_161099506_161099578_161099797_161100060
H1_mix_00001897	chr1	+	591	4	FSM	ENSG00000158793.14	ENST00000479266.5	567	4	-24	0	-5	0	multi-exon	FALSE	canonical	3	15	junction_1	94.9245314271641	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAGTTGTGAAAGGATG	2591	False	NA	NA	False	NA	NA	NA	161118080	161119952	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161118179_161119133_161119389_161119508_161119613_161119818
H1_mix_00001900	chr1	+	1752	6	FSM	ENSG00000158793.14	ENST00000368007.8	1749	6	-3	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	89.7275877308646	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCATGTCCCAGCCCCAT	4	True	NA	4	True	AATAAA	-13	NA	161118113	161121193	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161118552_161119133_161119389_161119508_161119613_161119818_161119953_161120106_161120233_161120498
H1_mix_00001905	chr1	+	2336	14	FSM	ENSG00000143258.16	ENST00000368002.8	2315	14	-21	0	0	0	multi-exon	TRUE	non_canonical	3	76	junction_1	36.9440645479818	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGCTTATTTGTATTT	-16	True	NA	3	True	AATAAA	-16	NA	161159478	161165723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161159679_161160365_161160507_161160619_161161241_161162037_161162098_161162269_161162391_161162614_161162727_161162918_161163075_161163554_161163620_161163877_161163982_161164163_161164251_161164533_161164613_161164834_161164943_161165028_161165144_161165356
H1_mix_00001906	chr1	+	2375	12	NIC	ENSG00000143258.16	novel	2195	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	111	junction_1	24.5397299721785	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGCTTATTTGTATTT	26	True	NA	3	True	AATAAA	-16	NA	161159520	161165723	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_161159679_161160619_161161241_161162037_161162098_161162269_161162391_161162614_161162727_161162918_161163075_161163554_161163620_161163877_161163982_161164163_161164251_161164533_161164943_161165028_161165144_161165356
H1_mix_00001907	chr1	+	2111	13	FSM	ENSG00000143258.16	ENST00000368001.1	2095	13	-16	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_11	52.0071442741817	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGCTTATTTGTATTT	26	True	NA	3	True	AATAAA	-16	NA	161159520	161165723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161159679_161160619_161161241_161162037_161162098_161162269_161162391_161162614_161162727_161162918_161163075_161163554_161163620_161163877_161163982_161164163_161164251_161164533_161164613_161164834_161164943_161165070_161165144_161165356
H1_mix_00001909	chr1	+	1699	13	FSM	ENSG00000143224.18	ENST00000352210.9	1686	13	-13	0	-13	0	multi-exon	TRUE	canonical	3	73	junction_1	89.4029579426144	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTGGCTGTTCTAT	-60	True	NA	10	True	AATAAA	-16	NA	161166396	161171218	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161166612_161166839_161166935_161167099_161167235_161167370_161167487_161167994_161168128_161168431_161168577_161168992_161169184_161169659_161169721_161169905_161170025_161170408_161170520_161170619_161170770_161170906_161170950_161171033
H1_mix_00001911	chr1	+	1580	12	NIC	ENSG00000143224.18	novel	1686	13	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_3	127.672747986845	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTGGCTGTTCTAT	-38	True	NA	10	True	AATAAA	-16	NA	161166418	161171218	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_161166612_161166839_161166935_161167099_161167235_161167994_161168128_161168412_161168577_161168992_161169184_161169659_161169721_161169905_161170025_161170408_161170520_161170619_161170770_161170906_161170950_161171033
H1_mix_00001916	chr1	+	1613	12	NIC	ENSG00000143224.18	novel	1667	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	95.8339645445735	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTGGCTGTTCTAT	-27	True	NA	10	True	AATAAA	-16	NA	161166429	161171218	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_161166673_161166839_161166935_161167099_161167235_161167370_161167487_161168412_161168577_161168992_161169184_161169659_161169721_161169905_161170025_161170408_161170520_161170619_161170770_161170906_161170950_161171033
H1_mix_00001917	chr1	+	1743	13	NIC	ENSG00000143224.18	novel	1733	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	100.094226440223	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTGGCTGTTCTAT	-27	True	NA	10	True	AATAAA	-16	NA	161166429	161171218	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_161166673_161166839_161166935_161167099_161167235_161167354_161167487_161167994_161168128_161168431_161168577_161168992_161169184_161169659_161169721_161169905_161170025_161170408_161170520_161170619_161170770_161170906_161170950_161171033
H1_mix_00001919	chr1	+	1539	12	NIC	ENSG00000143224.18	novel	1686	13	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_3	112.496538055089	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTGGCTGTTCTAT	-16	True	NA	10	True	AATAAA	-16	NA	161166440	161171218	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_161166612_161166839_161166935_161167099_161167235_161167994_161168128_161168431_161168577_161168992_161169184_161169659_161169721_161169905_161170025_161170408_161170520_161170619_161170770_161170906_161170950_161171033
H1_mix_00001920	chr1	+	1593	12	NIC	ENSG00000143224.18	novel	1733	13	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_3	97.7187734147638	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTGGCTGTTCTAT	-9	True	NA	10	True	AATAAA	-16	NA	161166447	161171218	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_161166673_161166839_161166935_161167099_161167235_161167994_161168128_161168431_161168577_161168992_161169184_161169659_161169721_161169905_161170025_161170408_161170520_161170619_161170770_161170906_161170950_161171033
H1_mix_00001922	chr1	+	831	6	FSM	ENSG00000143224.18	ENST00000544598.5	813	6	-18	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	132.393353307483	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTGGCTGTTCTATCA	-5	True	NA	12	True	AATAAA	-18	NA	161166451	161171220	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161166673_161166839_161166935_161167099_161167235_161170619_161170770_161170906_161170950_161171033
H1_mix_00001923	chr1	+	2484	11	FSM	ENSG00000143224.18	ENST00000495483.5	2471	11	-13	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	137.002189763522	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGGAGGGAAAGACAGCGT	10	True	NA	7	True	AATAAA	-35	NA	161166466	161178013	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161166612_161166839_161166935_161167099_161167235_161167338_161167487_161168412_161168577_161168992_161169184_161169659_161169721_161169905_161170025_161170408_161170520_161170619_161170770_161176848
H1_mix_00001925	chr1	+	1427	12	NIC	ENSG00000143224.18	novel	1686	13	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_4	97.7689974353022	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTGGCTGTTCTAT	214	False	NA	10	True	AATAAA	-16	NA	161166883	161171218	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_161166935_161167099_161167235_161167370_161167487_161167994_161168128_161168444_161168577_161168992_161169184_161169659_161169721_161169905_161170025_161170408_161170520_161170619_161170770_161170906_161170950_161171033
H1_mix_00001926	chr1	+	1420	12	NIC	ENSG00000143224.18	novel	1686	13	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_9	103.795253000581	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTGGCTGTTCTAT	236	False	NA	10	True	AATAAA	-16	NA	161166905	161171218	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_161166935_161167099_161167235_161167370_161167487_161167994_161168128_161168431_161168577_161168992_161169184_161169659_161169721_161169905_161170025_161170408_161170582_161170679_161170770_161170906_161170950_161171033
H1_mix_00001928	chr1	+	1564	9	ISM	ENSG00000143224.18	ENST00000367999.9	1733	13	1143	2	189	0	3prime_fragment	FALSE	canonical	3	159	junction_1	61.5792172733626	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTGGCTGTTCTAT	333	False	NA	10	True	AATAAA	-16	NA	161167568	161171218	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_161168128_161168431_161168577_161168992_161169184_161169659_161169721_161169905_161170025_161170408_161170520_161170619_161170770_161170906_161170950_161171033
H1_mix_00001939	chr1	+	1545	13	FSM	ENSG00000158864.13	ENST00000677045.1	1545	13	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	329.65869344925	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTAGGCCTAAACTTCTG	249	False	NA	9	True	AATAAA	-16	NA	161202313	161214381	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161202481_161206406_161206598_161209192_161209314_161209482_161209596_161209856_161209932_161210110_161210189_161210303_161210390_161210590_161210711_161212350_161212481_161213379_161213476_161213648_161213733_161213863_161213922_161214155
H1_mix_00001943	chr1	+	2792	10	FSM	ENSG00000158882.15	ENST00000367988.8	2790	10	-8	6	-8	-4	multi-exon	FALSE	canonical	3	29	junction_1	9.43332678968494	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAAGCTCAATGTTTCAC	-8	True	NA	6	True	AGTAAA	-11	NA	161226051	161230740	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161226137_161226354_161226605_161226887_161226956_161227257_161227351_161227635_161227738_161227883_161227990_161228185_161228309_161228427_161228505_161228714_161228818_161228955
H1_mix_00001947	chr1	+	1207	5	FSM	ENSG00000143252.16	ENST00000432287.6	460	5	-2	-745	-1	0	multi-exon	FALSE	canonical	3	62	junction_2	352.81333591575	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTAGAGAAACCAAGAAAAT	-2	True	NA	12	True	ATTAAA	-31	NA	161314379	161363206	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161314426_161323613_161323671_161340593_161340656_161356676_161356841_161362328
H1_mix_00001949	chr1	+	2703	5	FSM	ENSG00000289106.1_ENSG00000143252.16	ENST00000342751.8	1127	5	-16	-1560	-16	-2	multi-exon	FALSE	canonical	3	90	junction_4	342.801691944483	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTATTTTCCAAATTTG	NA	False	NA	NA	False	AGTAAA	-16	NA	161314364	161364749	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161314426_161323613_161323671_161328395_161328498_161340593_161340656_161362328
H1_mix_00001953	chr1	+	1336	6	FSM	ENSG00000081721.12	ENST00000367943.5	1330	6	-6	0	0	0	multi-exon	FALSE	canonical	3	225	junction_1	57.88471300784	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTATGTACAAAAATTTGA	-14	True	NA	121	True	NA	NA	NA	161749779	161757238	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161750146_161751667_161751782_161751865_161751985_161752367_161752465_161753074_161753262_161756785
H1_mix_00001955	chr1	+	7481	16	FSM	ENSG00000118217.7	ENST00000367942.4	7470	16	-11	0	0	0	multi-exon	FALSE	canonical	3	65	junction_5	8.4369557437634	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTTTATTCTGTATGTA	16	False	NA	26	True	AATAAA	-16	NA	161766308	161964070	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161766443_161778243_161778321_161781911_161782000_161783989_161784097_161791407_161791538_161792123_161792328_161802051_161802273_161819632_161819819_161821069_161821162_161846448_161846581_161851721_161851836_161853223_161853324_161860206_161860278_161863197_161863313_161912295_161912381_161958445
H1_mix_00001958	chr1	+	5709	12	Fusion	ENSG00000239887.6_ENSG00000198929.13	novel	5016	10	NA	NA	-5	0	multi-exon	FALSE	canonical	3	20	junction_3	15.4170668550546	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGGCTTTGTCTGTTT	-31	True	NA	14	True	AATAAA	-15	NA	162069685	162386812	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_+_162070283_162154404_162154477_162287343_162287437_162300632_162300707_162333016_162333126_162343834_162343977_162355186_162355354_162356959_162357137_162365403_162365570_162367051_162367205_162381890_162382219_162383181
H1_mix_00001964	chr1	+	2331	11	NIC	ENSG00000117143.13	novel	2377	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_8	56.1231681215521	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGGGCAGTGAAATAAATG	-18	True	NA	-17	True	ACTAAA	-45	NA	162561505	162599799	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_162561778_162566011_162566349_162576776_162576982_162579427_162579604_162581286_162581460_162587474_162587669_162588692_162588834_162590322_162590512_162592734_162592783_162597791_162597859_162599270
H1_mix_00001965	chr1	+	4378	2	FSM	ENSG00000132196.16	ENST00000367915.1	507	2	-25	-3846	-4	-2936	multi-exon	FALSE	canonical	3	281	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTAAATGGTTTAGAAGG	NA	False	NA	NA	False	NA	NA	NA	162790697	162796898	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_162790836_162792658
H1_mix_00001968	chr1	+	1986	14	FSM	ENSG00000143228.13	ENST00000271452.8	1964	14	-22	0	-3	0	multi-exon	FALSE	canonical	3	176	junction_1	30.8918709745411	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATGGCTGTTGTTTTGT	-3	True	NA	38	True	AGTAAA	-45	NA	163321931	163355759	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_163322213_163326031_163326175_163327487_163327563_163328227_163328305_163328845_163328908_163336750_163336849_163338019_163338094_163339380_163339478_163340363_163340427_163343732_163343871_163345677_163345819_163347762_163347939_163348944_163349081_163355334
H1_mix_00001970	chr1	+	535	2	Intergenic	novelGene_117	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	NA	False	NA	6	True	ATTAAA	-16	NA	163591623	163596487	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_163591854_163596182
H1_mix_00001971	chr1	+	7026	8	FSM	ENSG00000185630.19	ENST00000367897.5	1459	8	-701	-4866	-62	0	multi-exon	FALSE	canonical	3	65	junction_6	40.8506488345544	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATACTTGTATTT	-1	True	NA	16	True	AATAAA	-17	NA	164559121	164851821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_164560014_164563237_164563312_164792493_164792739_164799698_164799890_164807541_164807678_164811989_164812150_164821536_164821627_164846583
H1_mix_00001973	chr1	+	1674	8	FSM	ENSG00000185630.19	ENST00000560469.5	1674	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	61.0078616546545	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACTCGAATCCCTCACTC	7192	False	NA	53	True	NA	NA	NA	164576783	164847101	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_164577005_164792493_164792739_164799698_164799890_164807541_164807678_164811989_164812150_164820071_164820185_164821536_164821627_164846583
H1_mix_00001982	chr1	+	4125	6	NIC	ENSG00000143157.12	novel	5751	6	NA	NA	-69	-2	combination_of_known_junctions	FALSE	canonical	3	71	junction_1	68.5985422585641	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCTATGGTGATTTTATT	NA	False	NA	13	True	AATAAA	-19	NA	166839377	166854471	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_166839770_166840954_166841089_166846611_166846739_166847493_166847593_166848937_166850424_166852584
H1_mix_00001984	chr1	+	5719	6	FSM	ENSG00000143157.12	ENST00000367876.9	5751	6	0	32	0	-32	multi-exon	FALSE	canonical	3	164	junction_1	39.2907113705008	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATCTCAAAAAGAAAAGAAA	-22	True	NA	NA	False	NA	NA	NA	166839474	166856327	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_166839605_166840954_166841089_166846611_166846739_166847493_166847593_166848937_166850424_166852584
H1_mix_00001986	chr1	+	13944	17	FSM	ENSG00000143190.23	ENST00000271411.8	13945	17	1	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	16.4502089652381	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAGTTTCTTTGAAATTG	4	True	NA	36	True	ATTAAA	-26	NA	167220890	167427345	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_167220959_167303473_167303575_167332469_167332536_167365466_167365568_167370160_167370215_167371916_167372037_167374107_167374297_167376028_167376156_167383856_167383952_167389587_167389762_167396285_167396428_167397993_167398134_167399185_167399366_167401450_167401557_167411958_167412305_167413025_167413115_167415499
H1_mix_00001988	chr1	+	727	2	FSM	ENSG00000197965.12	ENST00000464954.1	607	2	-92	-28	-92	28	multi-exon	FALSE	canonical	3	917	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGTCTGGTTTCCTTGTCT	NA	False	NA	NA	False	GATAAA	-22	NA	167721857	167765924	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_167722243_167765582
H1_mix_00001990	chr1	+	4967	6	FSM	ENSG00000197965.12	ENST00000359523.7	4978	6	0	11	0	-11	multi-exon	FALSE	canonical	3	728	junction_5	66.8413045952875	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTTCGCAGTGACTTAG	-8	True	NA	NA	False	AATAAA	-6	NA	167721981	167791908	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_167722243_167765582_167765750_167772274_167772489_167773235_167773369_167776063_167776167_167787819
H1_mix_00001991	chr1	+	630	5	FSM	ENSG00000197965.12	ENST00000474859.5	630	5	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_4	326.468222037	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTCCGGCGGACATCAC	162	False	NA	NA	False	NA	NA	NA	167722151	167787844	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_167722243_167765582_167765750_167772274_167772489_167773235_167773369_167787819
H1_mix_00001993	chr1	+	3316	20	FSM	ENSG00000143164.16	ENST00000367843.7	3302	20	-21	7	-21	0	multi-exon	FALSE	canonical	3	22	junction_10	34.9334943925012	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGAATTTGACTTTTTAT	NA	False	NA	10	True	ATTAAA	-22	NA	167936639	168075836	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_167937009_167951799_167951862_167966628_167966722_167974829_167975016_167987494_167987609_167991203_167991340_167993225_167993441_168002481_168002576_168003869_168003990_168004532_168004794_168022987_168023048_168038370_168038489_168043024_168043141_168044584_168044672_168044899_168045228_168063620_168063760_168065589_168065747_168066376_168066466_168068357_168068464_168075370
H1_mix_00001994	chr1	+	3186	19	FSM	ENSG00000143164.16	ENST00000312263.10	3186	19	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_10	16.9934627953745	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCTGAATTTGACTTTTT	21	True	NA	8	True	ATTAAA	-20	NA	167936707	168075834	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_167937009_167951799_167951862_167966628_167966722_167974829_167975016_167987494_167987609_167991203_167991340_167993225_167993441_168002481_168002576_168003869_168003990_168004532_168004794_168038370_168038489_168043024_168043141_168044584_168044672_168044899_168045228_168063620_168063760_168065589_168065747_168066376_168066466_168068357_168068464_168075370
H1_mix_00001995	chr1	+	2998	7	FSM	ENSG00000143155.13	ENST00000367833.7	2998	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	144.413757424053	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGTTTTACTATTTCAT	4	True	NA	14	True	AATAAA	-18	NA	168178961	168202109	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_168179182_168183901_168184082_168184778_168184879_168191368_168191501_168196546_168196643_168198918_168198982_168199902
H1_mix_00001998	chr1	+	11079	8	FSM	ENSG00000213064.10	ENST00000271375.7	11040	8	-39	0	15	0	multi-exon	FALSE	canonical	3	69	junction_4	11.5493616750901	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATCTAGTGTTGTCTCTT	NA	False	NA	12	True	AATAAA	-22	NA	168225964	168253021	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_168226143_168231513_168231601_168231833_168231920_168235100_168235183_168236588_168236625_168236711_168236771_168239130_168239161_168242500
H1_mix_00002006	chr1	+	2850	24	NIC	ENSG00000000460.17	novel	4011	25	NA	NA	0	-8	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	47.8065968191932	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAGTTGAATCTAGTGAA	18	True	NA	1	True	TATAAA	-10	NA	169795078	169853077	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_169795214_169798918_169798959_169800882_169800972_169802620_169802726_169803168_169803310_169804074_169804241_169806003_169806089_169807790_169807930_169821678_169821760_169823407_169823473_169827050_169827200_169827710_169827841_169829262_169829450_169830258_169830342_169830695_169830748_169832416_169832507_169836926_169837113_169842416_169842540_169843673_169843770_169847689_169847804_169849499_169849605_169850264_169850346_169851816_169851937_169852789
H1_mix_00002008	chr1	+	4355	24	FSM	ENSG00000000460.17	ENST00000286031.10	4355	24	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	46.8361177742813	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGCATTGCTACATTTTT	135	False	NA	NA	False	AATAAA	-27	NA	169795408	169854080	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_169795984_169798856_169798959_169800882_169800972_169802620_169802726_169803168_169803310_169804074_169804241_169806003_169806089_169807790_169807930_169821678_169821760_169823407_169823473_169827050_169827200_169827710_169827841_169829262_169829450_169830258_169830342_169830695_169830748_169832416_169832507_169836926_169837113_169842416_169842540_169843673_169843770_169847689_169847804_169849499_169849605_169850264_169850346_169851816_169851937_169852789
H1_mix_00002018	chr1	+	10390	34	FSM	ENSG00000117523.18	ENST00000367742.7	10366	34	-24	0	-3	0	multi-exon	TRUE	canonical	3	30	junction_4	51.1163170583048	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGGAGCTTATAATCAT	-26	True	NA	14	True	AATAAA	-19	NA	171485526	171593511	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_171485736_171512031_171512201_171512994_171513173_171514535_171514646_171515733_171515860_171517590_171517815_171522176_171522260_171523220_171523355_171523434_171523523_171524820_171524966_171527790_171527845_171532342_171532962_171535427_171535598_171536028_171536279_171537262_171537474_171539970_171542230_171545478_171545688_171550085_171550241_171557239_171558144_171561017_171561104_171566232_171566422_171566591_171566844_171568246_171568340_171571319_171571422_171574926_171575129_171577433_171577638_171579353_171579467_171579827_171579965_171583955_171584188_171584418_171584527_171587002_171587222_171587647_171587752_171588378_171588506_171591586
H1_mix_00002019	chr1	+	10360	34	FSM	ENSG00000117523.18	ENST00000338920.8	10355	34	-5	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	52.3337105845222	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGGAGCTTATAATCAT	-2	True	NA	14	True	AATAAA	-19	NA	171485550	171593511	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_171485736_171512031_171512201_171513000_171513173_171514535_171514646_171515733_171515860_171517590_171517815_171522176_171522260_171523220_171523355_171523434_171523523_171524820_171524966_171527790_171527845_171532342_171532962_171535427_171535598_171536028_171536279_171537262_171537474_171539970_171542230_171545478_171545688_171550085_171550241_171557239_171558144_171561017_171561104_171566232_171566422_171566591_171566844_171568246_171568340_171571319_171571422_171574926_171575129_171577433_171577638_171579353_171579467_171579827_171579965_171583955_171584188_171584418_171584527_171587002_171587222_171587647_171587752_171588378_171588506_171591586
H1_mix_00002020	chr1	+	6533	19	ISM	ENSG00000117523.18	ENST00000338920.8	10355	34	51	35046	11	25673	5prime_fragment	FALSE	canonical	3	11	junction_2	17.5664523143855	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGTCTTCTGGTGTCATT	54	False	NA	19	True	ATTAAA	-20	NA	171485606	171558465	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_171485736_171512031_171512201_171513000_171513173_171514535_171514646_171515733_171515860_171517590_171517815_171522176_171522260_171523220_171523355_171523434_171523523_171524820_171524966_171527790_171527845_171532342_171532962_171535427_171535598_171536028_171536279_171537262_171537474_171539970_171542230_171545478_171545688_171550085_171550241_171557239
H1_mix_00002021	chr1	+	10234	34	NIC	ENSG00000117523.18	novel	10366	34	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_3	50.4713867606459	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGGAGCTTATAATCAT	5415	False	NA	14	True	AATAAA	-19	NA	171512031	171593511	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_171512201_171512994_171513173_171514535_171514646_171515733_171515860_171517590_171517815_171522176_171522260_171523220_171523355_171523434_171523523_171524820_171524966_171527790_171527845_171532342_171532962_171535427_171535598_171536028_171536279_171537262_171537474_171539970_171542230_171545478_171545688_171550085_171550241_171557239_171558144_171561017_171561104_171566232_171566422_171566591_171566844_171568246_171568340_171571319_171571422_171574926_171575129_171577433_171577638_171579353_171579467_171579827_171579965_171583955_171584188_171584418_171584527_171587002_171587222_171587647_171587752_171588378_171588506_171591151_171591205_171591586
H1_mix_00002032	chr1	+	5604	23	NIC	ENSG00000094975.14	novel	5625	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_11	44.6100644612813	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGGCTCTTCTGTCTTT	1	True	NA	33	True	AATAAA	-23	NA	172533149	172611833	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_172533498_172551511_172551627_172553259_172553371_172555868_172556024_172557279_172557418_172557643_172557795_172569018_172569143_172570046_172570172_172570662_172570731_172573890_172573999_172575517_172575624_172577763_172577820_172578297_172578390_172579201_172579268_172585017_172585087_172585857_172585949_172588759_172589927_172590983_172591072_172600063_172600169_172602063_172602219_172602695_172602788_172608746_172608803_172609815
H1_mix_00002033	chr1	+	5323	20	NIC	ENSG00000094975.14	novel	5625	24	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_13	67.407102381897	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGGCTCTTCTGTCTTT	11	True	NA	33	True	AATAAA	-23	NA	172533159	172611833	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_172533498_172551511_172551627_172555868_172556024_172557279_172557418_172557643_172557795_172569018_172569143_172570046_172570172_172570662_172570731_172573890_172573999_172575517_172575624_172577763_172577820_172578297_172578390_172579201_172579268_172588759_172589927_172590983_172591072_172600063_172600169_172602063_172602219_172602695_172602788_172608746_172608803_172609815
H1_mix_00002037	chr1	+	859	4	FSM	ENSG00000117592.9	ENST00000470017.1	859	4	0	0	0	0	multi-exon	FALSE	canonical	3	4206	junction_3	204.789865200622	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTTGAGATTCTTTATA	3813	False	NA	17	True	ATTAAA	-18	NA	173481198	173488015	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_173481483_173485360_173485508_173486254_173486402_173487734
H1_mix_00002040	chr1	+	3414	12	FSM	ENSG00000076321.11	ENST00000209884.5	3414	12	0	0	0	0	multi-exon	TRUE	canonical	3	62	junction_8	9.29587129539216	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGCTAATGCTTTTTAT	28	True	NA	NA	False	AATAAA	-24	NA	173714980	173786692	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_173715079_173716002_173716067_173733712_173734287_173751763_173751923_173753212_173753308_173755922_173756039_173756975_173757160_173766145_173766290_173774304_173774439_173775633_173775843_173782123_173782231_173785162
H1_mix_00002043	chr1	+	3360	17	FSM	ENSG00000117593.12	ENST00000649689.2	3336	17	-24	0	-4	0	multi-exon	FALSE	canonical	3	203	junction_12	27.973131640022	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGTTTTTTTTTTTAG	-17	True	NA	25	True	ATTAAA	-41	NA	173824648	173858546	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_173825357_173826686_173826787_173828332_173828400_173830659_173830762_173831534_173831631_173833375_173833500_173834472_173834520_173836939_173837047_173838189_173838260_173839366_173839547_173840865_173840974_173845228_173845292_173850326_173850480_173853348_173853568_173853794_173853906_173856665_173856742_173857517
H1_mix_00002044	chr1	+	3233	16	FSM	ENSG00000117593.12	ENST00000647645.1	3209	16	-24	0	0	0	multi-exon	FALSE	canonical	3	8	junction_11	67.5266531740533	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATAGTAAAAGTCATTTT	18	True	NA	-4	True	ATTAAA	-12	NA	173824683	173858517	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_173825357_173826686_173826787_173828332_173828400_173830659_173830762_173831534_173831631_173833375_173833500_173834472_173834520_173836939_173837047_173838189_173838260_173839366_173839547_173840865_173840974_173850326_173850480_173853348_173853568_173853794_173853906_173856665_173856742_173857517
H1_mix_00002046	chr1	+	2899	21	FSM	ENSG00000152061.24	ENST00000251507.8	2899	21	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_8	37.4466286867056	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGTAGTGGTGTTTGTT	-11	True	NA	16	True	AATAAA	-20	NA	174159516	174958182	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_174159658_174219124_174219296_174220971_174221165_174231144_174231356_174241482_174241658_174250474_174250633_174252479_174252591_174272413_174272481_174275832_174275936_174278612_174278780_174304985_174305128_174370978_174371073_174393994_174394146_174637374_174637489_174683521_174683597_174699524_174699651_174702112_174702257_174752312_174752355_174811831_174811961_174957456_174957550_174957890
H1_mix_00002049	chr1	+	6513	9	NIC	ENSG00000152061.24	novel	6282	8	NA	NA	-134	0	combination_of_known_junctions	FALSE	canonical	3	235	junction_1	51.9230199429887	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCATGTATGTCTTTTT	NA	False	NA	12	True	AATAAA	-12	NA	174874323	174995301	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_174874507_174877391_174877606_174957456_174957550_174969276_174969388_174976077_174976183_174978806_174978891_174982833_174982906_174988640_174988839_174989848
H1_mix_00002050	chr1	+	648	4	FSM	ENSG00000152061.24	ENST00000478442.5	648	4	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_3	94.9116548281728	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGTAGTGGTGTTTGTT	26	False	NA	16	True	AATAAA	-20	NA	174874457	174958182	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_174874507_174877391_174877606_174957456_174957550_174957890
H1_mix_00002051	chr1	+	530	3	NIC	ENSG00000152061.24	novel	648	4	NA	NA	-96	0	combination_of_known_splicesites	FALSE	canonical	3	103	junction_1	42	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGTAGTGGTGTTTGTT	NA	False	NA	16	True	AATAAA	-20	NA	174874361	174958182	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_174874507_174957456_174957550_174957890
H1_mix_00002052	chr1	+	772	4	FSM	ENSG00000152061.24	ENST00000486220.5	772	4	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	128.971142336398	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGGTGTTTGTTGCAAC	25	False	NA	21	True	AATAAA	-25	NA	174875545	174958187	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_174875714_174877391_174877606_174957456_174957550_174957890
H1_mix_00002053	chr1	+	6536	9	NIC	ENSG00000152061.24	novel	6282	8	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	102	junction_1	86.8338031817103	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGTCTTTTTTATTTTT	-6	True	NA	19	True	AATAAA	-19	NA	174875514	174995308	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_174875714_174877391_174877606_174957456_174957550_174969276_174969388_174976077_174976183_174978806_174978891_174982833_174982906_174988640_174988839_174989848
H1_mix_00002056	chr1	+	2871	6	FSM	ENSG00000116161.18	ENST00000367679.7	2869	6	-2	0	0	0	multi-exon	FALSE	canonical	3	2989	junction_4	104.535926838575	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGAAGCCGAGGGACGAGA	-18	True	NA	NA	False	NA	NA	NA	174999944	175012027	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_175000196_175004613_175004834_175006744_175006842_175007097_175007198_175008608_175008707_175009922
H1_mix_00002057	chr1	+	1059	6	FSM	ENSG00000116161.18	ENST00000405362.1	1059	6	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	1242.45167310443	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTAAAGTCGTTTTGGG	79	False	NA	NA	False	NA	NA	NA	175000212	175010079	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_175000600_175004613_175004834_175006744_175006842_175007097_175007198_175008608_175008707_175009922
H1_mix_00002059	chr1	+	10172	18	NIC	ENSG00000075391.17	novel	9843	18	NA	NA	-308	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_12	8.74474632195206	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAGACTAAAGTTGCTAC	51	False	NA	NA	False	AATAAA	-16	NA	178093795	178478850	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_178094695_178283563_178283692_178299991_178300119_178390099_178390207_178420510_178420621_178439421_178439576_178441548_178441648_178442674_178443230_178445517_178445663_178451570_178451716_178452415_178452653_178454446_178454649_178456699_178456900_178457682_178458545_178464277_178464413_178465919_178466123_178467333_178467422_178473074
H1_mix_00002060	chr1	+	10085	18	FSM	ENSG00000075391.17	ENST00000367649.8	9843	18	-242	0	-242	0	multi-exon	FALSE	canonical	3	14	junction_12	9.1858925988371	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAGACTAAAGTTGCTAC	117	False	NA	NA	False	AATAAA	-16	NA	178093861	178478850	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_178094695_178283563_178283692_178299991_178300119_178390099_178390207_178420510_178420621_178439421_178439576_178441548_178441648_178442674_178443230_178445517_178445663_178451570_178451716_178452415_178452653_178454446_178454649_178456720_178456900_178457682_178458545_178464277_178464413_178465919_178466123_178467333_178467422_178473074
H1_mix_00002061	chr1	+	14440	16	FSM	ENSG00000075391.17	ENST00000462775.5	14453	16	13	0	13	0	multi-exon	FALSE	canonical	3	16	junction_1	10.5947576135034	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGTGTGTGTGGAAGGTG	32	False	NA	NA	False	AATAAA	-17	NA	178341483	178484147	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_178341609_178390099_178390207_178420510_178420621_178439421_178439576_178441548_178441648_178442674_178443230_178445517_178445663_178451570_178451716_178452415_178452653_178454446_178454649_178456699_178456900_178457682_178458545_178464277_178464413_178465919_178466123_178467333_178467422_178473074
H1_mix_00002065	chr1	+	7516	20	FSM	ENSG00000116191.19	ENST00000367635.8	7492	20	-24	0	1	0	multi-exon	FALSE	canonical	3	65	junction_15	15.2184463081236	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATTGGGTGAGGATGTTT	19	False	NA	-84	True	AATAAA	-14	NA	178725219	178921840	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_178725420_178776681_178776822_178784417_178784523_178785556_178785608_178808044_178808129_178811314_178811405_178821611_178821705_178833423_178833551_178877497_178877636_178878901_178878993_178883465_178883534_178885075_178885212_178885968_178886121_178889641_178889697_178892229_178892308_178893918_178894025_178897663_178897757_178902105_178902212_178906775_178906868_178916329
H1_mix_00002066	chr1	+	7512	19	FSM	ENSG00000116191.19	ENST00000367634.7	7441	19	-72	1	-18	1	multi-exon	FALSE	canonical	3	18	junction_14	22.4372925899145	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGGGTGAGGATGTTTT	299	False	NA	-83	True	AATAAA	-15	NA	178725146	178921841	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_178725420_178776681_178776822_178784417_178784523_178785556_178785608_178808044_178808129_178811314_178811405_178821611_178821705_178833423_178833551_178877497_178877636_178878901_178878993_178883465_178883534_178885075_178885212_178885968_178886121_178889641_178889697_178893918_178894025_178897663_178897757_178902105_178902212_178906775_178906868_178916329
H1_mix_00002068	chr1	+	2031	6	FSM	ENSG00000186283.14	ENST00000367627.8	2031	6	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_3	68.818602136341	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGGCGTACTTTCTGTT	12	True	NA	19	True	ATTAAA	-20	NA	179082069	179095996	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_179082388_179082939_179083054_179085627_179085894_179087910_179088090_179094092_179094218_179094967
H1_mix_00002069	chr1	+	1716	5	NIC	ENSG00000186283.14	novel	2031	6	NA	NA	33	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_2	138.194383026229	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGGCGTACTTTCTGTT	13	False	NA	19	True	ATTAAA	-20	NA	179082118	179095996	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_179082388_179082939_179083054_179087910_179088090_179094092_179094218_179094967
H1_mix_00002072	chr1	+	3807	10	FSM	ENSG00000143337.19	ENST00000606911.7	3807	10	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_7	23.3428552000155	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGTTATAAACTTAATG	-5	True	NA	12	True	AATAAA	-25	NA	179882284	179920076	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_179882978_179884691_179884770_179889312_179889370_179900125_179900168_179901301_179901389_179903965_179904023_179907822_179907865_179908604_179908674_179913997_179914055_179917451
H1_mix_00002079	chr1	+	4147	14	FSM	ENSG00000143324.14	ENST00000367589.3	4126	14	-21	0	-11	0	multi-exon	FALSE	canonical	3	18	junction_10	43.6764597477254	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGTTAACAATTTAGTG	-13	True	NA	7	True	AATAAA	-19	NA	180632010	180886126	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_180632271_180682359_180682412_180787752_180787855_180803387_180803612_180806061_180806212_180806473_180806558_180811406_180811489_180824752_180824944_180825164_180825345_180834873_180835046_180863707_180863875_180873802_180873943_180880075_180880298_180884005
H1_mix_00002083	chr1	+	4160	1	FSM	ENSG00000162783.11	ENST00000367577.7	4201	1	-14	55	-14	-55	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTGTGTATTTGTAAG	131	False	NA	NA	False	TATAAA	-21	NA	181088685	181092845	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_181088700_181092800
H1_mix_00002086	chr1	+	2144	13	FSM	ENSG00000135838.14	ENST00000488424.5	2144	13	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_12	22.6421435969889	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCTTTTGTGAAGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	182789292	182830384	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_182789806_182792231_182792287_182794355_182794440_182803697_182803772_182806144_182806233_182812155_182812214_182814782_182814859_182816713_182816807_182818540_182818690_182818812_182818860_182822114_182822200_182825780_182825821_182829602
H1_mix_00002088	chr1	+	2542	11	FSM	ENSG00000135838.14	ENST00000258317.6	2461	11	-81	0	-81	0	multi-exon	FALSE	canonical	3	53	junction_8	13.7404512298541	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCTTTTGTGAAGTCA	4494	False	NA	NA	False	AATAAA	-19	NA	182794268	182830384	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_182794440_182803697_182803772_182806144_182806233_182812155_182812214_182814782_182814859_182816713_182816807_182818540_182818690_182818812_182818860_182822114_182822200_182825780_182825821_182828723
H1_mix_00002090	chr1	+	1280	6	FSM	ENSG00000135829.17	ENST00000483416.1	814	6	-128	-338	-128	338	multi-exon	FALSE	canonical	3	84	junction_1	328.235281467425	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTTGATGTAAAAGCCAGC	254	False	NA	NA	False	NA	NA	NA	182839605	182854480	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_182839936_182842544_182842678_182843293_182843435_182852232_182852345_182853305_182853419_182854029
H1_mix_00002091	chr1	+	2531	9	FSM	ENSG00000135829.17	ENST00000485081.5	2531	9	0	0	0	0	multi-exon	TRUE	canonical	3	828	junction_1	128.171515946407	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTTGCCGTGTAGTTTG	8882	False	NA	12	True	AATAAA	-12	NA	182877417	182887747	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_182878174_182879249_182879411_182880496_182880609_182881263_182881426_182881519_182881648_182883138_182883369_182883519_182883636_182884612_182884814_182887082
H1_mix_00002096	chr1	+	5478	24	NNC	ENSG00000058085.15	novel	5398	23	NA	NA	-332	-183	intron_retention	FALSE	canonical	3	14	junction_1	14.0152495936399	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTACCAAAGTAATGGAAAT	NA	False	NA	60	True	ACTAAA	-16	NA	183185905	183244944	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_183186115_183186209_183186432_183207880_183208070_183215452_183215589_183218389_183218489_183220824_183220962_183222088_183222212_183223134_183223325_183225607_183225721_183226697_183226917_183227514_183227698_183228373_183228620_183230960_183231104_183232186_183232344_183232651_183232858_183234366_183234447_183235574_183235731_183236459_183236605_183237351_183237505_183238306_183238422_183239363_183239564_183240039_183240199_183240291_183240392_183243146
H1_mix_00002098	chr1	+	5985	22	FSM	ENSG00000116698.22	ENST00000515829.6	5629	22	-360	4	-49	0	multi-exon	FALSE	canonical	3	211	junction_14	48.2794210231551	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGATCTGTGTATCGAT	286	False	NA	14	True	ATTAAA	-14	NA	183472166	183554186	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_183472650_183512836_183512869_183515873_183515992_183517687_183517821_183526595_183526768_183527955_183528028_183528891_183529043_183529397_183529534_183533163_183533327_183533675_183533833_183537144_183537216_183538379_183538441_183540983_183541104_183542075_183542365_183544352_183544498_183544929_183545313_183545965_183546338_183549207_183549289_183549763_183549924_183550750_183550922_183551044_183551191_183551817
H1_mix_00002099	chr1	+	6411	25	NIC	ENSG00000116698.22	novel	6204	25	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_2	125.709479610286	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGATCTGTGTATCGAT	286	False	NA	14	True	ATTAAA	-14	NA	183472166	183554186	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_183472650_183501130_183501268_183502252_183502392_183512836_183512869_183515873_183515992_183517687_183517821_183526595_183526768_183527955_183528028_183528891_183529043_183529397_183529534_183533163_183533327_183533675_183533833_183537144_183537216_183538379_183538441_183540983_183541104_183542075_183542365_183544352_183544498_183544929_183545313_183545965_183546338_183547102_183547253_183549207_183549289_183549763_183549924_183550750_183550922_183551044_183551191_183551817
H1_mix_00002105	chr1	+	5812	22	FSM	ENSG00000116698.22	ENST00000347615.6	5788	22	-24	0	0	0	multi-exon	FALSE	canonical	3	126	junction_14	60.9586678305347	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGATCTGTGTATCGAT	4	True	NA	14	True	ATTAAA	-14	NA	183472477	183554186	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_183472650_183512836_183512869_183515873_183515992_183517687_183517821_183526595_183526768_183527955_183528028_183528891_183529043_183529397_183529534_183533163_183533327_183533675_183533833_183537144_183537216_183538379_183538441_183540983_183541104_183542075_183542503_183544352_183544498_183544929_183545313_183545965_183546338_183549207_183549289_183549763_183549924_183550750_183550922_183551044_183551191_183551817
H1_mix_00002106	chr1	+	6054	23	FSM	ENSG00000116698.22	ENST00000688051.1	5946	23	-110	2	-89	1	multi-exon	FALSE	canonical	3	102	junction_18	87.8449987287432	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATCTGTGTATCGATTCT	-10	True	NA	17	True	ATTAAA	-17	NA	183472388	183554189	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_183472650_183512836_183512869_183515873_183515992_183517687_183517821_183526595_183526768_183527955_183528028_183528891_183529043_183529397_183529534_183533163_183533327_183533675_183533833_183537144_183537216_183538379_183538441_183540983_183541104_183542075_183542503_183544352_183544498_183544929_183545313_183545965_183546338_183547102_183547253_183549207_183549289_183549763_183549924_183550750_183550922_183551044_183551191_183551817
H1_mix_00002107	chr1	+	6922	22	NIC	ENSG00000116698.22	novel	5970	24	NA	NA	-868	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	102.423247077751	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGATCTGTGTATCGAT	859	False	NA	14	True	ATTAAA	-14	NA	183471347	183554186	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_183472650_183515873_183515992_183517687_183517821_183526595_183526768_183527955_183528028_183528891_183529043_183529397_183529534_183533163_183533327_183533675_183533833_183537144_183537216_183538379_183538441_183540983_183541104_183542075_183542365_183544352_183544498_183544929_183545313_183545965_183546338_183547102_183547253_183549207_183549289_183549763_183549924_183550750_183550922_183551044_183551191_183551817
H1_mix_00002108	chr1	+	4460	21	NIC	ENSG00000116698.22	novel	4642	23	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	107.342722156651	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTGTATCGATTCTTTC	4	True	NA	20	True	ATTAAA	-20	NA	183472506	183554192	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_183472650_183515873_183515992_183517687_183517821_183526595_183526768_183527955_183528028_183528891_183529043_183529397_183529534_183533163_183533327_183533675_183533833_183537144_183537216_183538379_183538441_183540983_183541104_183542075_183542365_183544352_183544498_183544929_183545313_183545965_183546338_183549207_183549289_183549763_183549924_183550750_183550922_183551044_183551191_183552976
H1_mix_00002111	chr1	+	4701	18	FSM	ENSG00000143344.16	ENST00000360851.4	4725	18	12	12	12	-11	multi-exon	FALSE	canonical	2	4	junction_17	5.24948506289955	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCCAAAGGGATTGTATCT	10	True	NA	-3	True	AATAAA	-33	NA	183805131	183928520	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_183805325_183806374_183806486_183847565_183847775_183865995_183866074_183880615_183880801_183883785_183883911_183884722_183884939_183888473_183888578_183892076_183892162_183897807_183897898_183900149_183900237_183902567_183902601_183904849_183904972_183907011_183907102_183912081_183912269_183916446_183916702_183922221_183922337_183926104
H1_mix_00002112	chr1	+	1864	4	FSM	ENSG00000198860.14	ENST00000423085.7	1844	4	-26	6	-26	0	multi-exon	FALSE	canonical	3	39	junction_3	169.723304233685	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAGGTGTCTTGAAATC	NA	False	NA	11	True	AATAAA	-13	NA	184051624	184074206	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184072826
H1_mix_00002113	chr1	+	1857	5	FSM	ENSG00000198860.14	ENST00000533373.6	1834	5	-23	0	0	0	multi-exon	FALSE	canonical	3	49	junction_4	142.903813804951	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTTGAAATCTGTATT	21	False	NA	17	True	AATAAA	-19	NA	184051675	184074212	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184072156_184072195_184072826
H1_mix_00002114	chr1	+	1967	5	FSM	ENSG00000198860.14	ENST00000361641.6	1967	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	153.137805586994	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAGGTGTCTTGAAATC	21	False	NA	11	True	AATAAA	-13	NA	184051675	184074206	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184072156_184072311_184072826
H1_mix_00002116	chr1	+	1925	5	FSM	ENSG00000198860.14	ENST00000645668.2	1907	5	-18	0	0	0	multi-exon	FALSE	canonical	3	206	junction_4	82.1747376022583	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTTGAAATCTGTATT	-17	True	NA	17	True	AATAAA	-19	NA	184051711	184074212	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184072156_184072299_184072826
H1_mix_00002121	chr1	+	3429	7	FSM	ENSG00000121481.11	ENST00000367510.8	3407	7	-22	0	0	0	multi-exon	FALSE	canonical	3	265	junction_1	38.3525314244923	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTAGCAACCTCTATTCT	-6	True	NA	9	True	ATTAAA	-25	NA	185045535	185102603	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_185045650_185087551_185087641_185091578_185091740_185093060_185093277_185098071_185098345_185099790_185099963_185100199
H1_mix_00002126	chr1	+	556	4	FSM	ENSG00000143341.12	ENST00000493413.1	720	4	0	164	0	-164	multi-exon	FALSE	canonical	2	5	junction_3	2.05480466765633	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGGTTGAAGGAAATATAT	NA	False	NA	NA	False	NA	NA	NA	185963807	185977981	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_185963896_185965801_185965916_185970334_185970494_185977786
H1_mix_00002131	chr1	+	3820	14	FSM	ENSG00000157181.16	ENST00000287859.11	3820	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_11	42.6571580874145	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTGGAATTTTTAAATA	-30	True	NA	NA	False	AATAAA	-20	NA	186375837	186421375	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_186375975_186379766_186379885_186383021_186383157_186385987_186386084_186388441_186388549_186389587_186389625_186390710_186390852_186391695_186391792_186393946_186394016_186398312_186398442_186398953_186399045_186406082_186406269_186417543_186417655_186419008
H1_mix_00002132	chr1	+	1655	14	NNC	ENSG00000157181.16	novel	3820	14	NA	NA	13	-9	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_11	38.3081556969193	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCACAAGCTGCCTTGTT	-17	True	NA	3	True	ATTAAA	-4	NA	186375850	186419224	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_186375975_186379766_186379885_186383021_186383157_186385987_186386084_186388441_186388549_186389587_186389625_186390710_186390852_186391695_186391792_186393946_186394016_186398312_186398442_186398953_186399044_186406082_186406269_186417543_186417655_186419008
H1_mix_00002140	chr1	+	8308	9	FSM	ENSG00000116747.13	ENST00000400968.7	8291	9	-17	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	17.4243902332334	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATTCCAAGAAGTGAATAT	-35	True	NA	NA	False	NA	NA	NA	193059594	193091219	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_193059777_193069033_193069635_193075819_193076041_193076500_193076648_193076912_193077051_193081363_193081481_193082185_193082300_193082561_193082709_193084578
H1_mix_00002144	chr1	+	5869	17	FSM	ENSG00000134371.14	ENST00000367435.5	5869	17	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_8	36.754623433658	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGTTCATGCTATGTCG	9	True	NA	31	True	AATAAA	-28	NA	193122030	193254815	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_193122332_193125111_193125218_193130173_193130244_193135390_193135454_193135536_193135590_193138084_193138174_193141849_193142067_193147866_193147966_193150303_193150383_193152379_193152445_193203794_193203853_193212064_193212101_193212389_193212478_193232992_193233155_193236255_193236357_193249729_193249872_193250675
H1_mix_00002149	chr1	+	1768	2	FSM	ENSG00000230623.7	ENST00000634596.2	2379	2	168	443	-12	-443	multi-exon	FALSE	canonical	3	376	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACTTCGATTGGAATA	-7	True	NA	1	True	AATAAA	-20	NA	200411799	200475513	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_200411963_200473908
H1_mix_00002150	chr1	+	349	2	FSM	ENSG00000230623.7	ENST00000635220.2	483	2	133	1	-12	0	multi-exon	FALSE	canonical	3	277	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGCCCCATAATTGTA	-7	True	NA	11	True	AATAAA	-22	NA	200411799	200415550	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_200411963_200415364
H1_mix_00002156	chr1	+	4298	10	FSM	ENSG00000163362.11	ENST00000367342.8	4298	10	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	34.1807107540835	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGGGATGAGGGATTTT	327	False	NA	-1	True	AATAAA	-23	NA	200891340	200915735	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_200891702_200898306_200898456_200899472_200899598_200900103_200900221_200900936_200901160_200907833_200907888_200908729_200908941_200909223_200909398_200911452_200912138_200913536
H1_mix_00002157	chr1	+	4126	10	FSM	ENSG00000163362.11	ENST00000413687.3	4132	10	0	6	0	1	multi-exon	FALSE	canonical	3	10	junction_1	62.5157757867742	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGGATGAGGGATTTTT	-14	True	NA	0	True	AATAAA	-24	NA	200894899	200915736	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_200895088_200898306_200898456_200899472_200899598_200900103_200900221_200900936_200901160_200907833_200907888_200908729_200908941_200909223_200909398_200911452_200912138_200913536
H1_mix_00002160	chr1	+	11653	27	FSM	ENSG00000134369.16	ENST00000367295.5	11645	27	-8	0	-8	0	multi-exon	FALSE	canonical	3	21	junction_10	23.456903703621	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGTTCTCTAGCTCCCT	129	False	NA	16	True	AATAAA	-19	NA	201739859	201826969	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_201740077_201780420_201780560_201781011_201781310_201782175_201782870_201783405_201783853_201785309_201785352_201786428_201786578_201788467_201788639_201789739_201789793_201790553_201790578_201790688_201790767_201793791_201793876_201794465_201794578_201803592_201803715_201807952_201808150_201808417_201808611_201808702_201808872_201809163_201809262_201809441_201809538_201809945_201810106_201810522_201810759_201811602_201811758_201811902_201811975_201812464_201812662_201813139_201813259_201817087_201817286_201819836
H1_mix_00002161	chr1	+	11623	26	NIC	ENSG00000134369.16	novel	11645	27	NA	NA	-2	0	intron_retention	FALSE	canonical	3	36	junction_1	18.1515398795805	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGTTCTCTAGCTCCCT	-8	True	NA	16	True	AATAAA	-19	NA	201739865	201826969	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_201740077_201780420_201780560_201781011_201781310_201782175_201782870_201783405_201783853_201785309_201785352_201786428_201786578_201788467_201788639_201789739_201789793_201790688_201790767_201793791_201793876_201794465_201794578_201803592_201803715_201807952_201808150_201808417_201808611_201808702_201808872_201809163_201809262_201809441_201809538_201809945_201810106_201810522_201810759_201811602_201811758_201811902_201811975_201812464_201812662_201813139_201813259_201817087_201817286_201819836
H1_mix_00002169	chr1	+	1662	6	FSM	ENSG00000134375.11	ENST00000367287.5	1650	6	-12	0	-12	0	multi-exon	FALSE	canonical	3	746	junction_1	50.4396669299075	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAAGTGTATAATTCAG	NA	False	NA	NA	False	CATAAA	-18	NA	201955490	201970664	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_201955553_201957280_201957381_201957510_201957575_201963615_201963745_201965432_201965544_201969468
H1_mix_00002170	chr1	+	1861	7	FSM	ENSG00000134375.11	ENST00000478378.5	821	7	-26	-1014	-23	67	multi-exon	TRUE	canonical	0	0	junction_3	395.638057095399	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCCAAAATGTTCTCATT	NA	False	NA	NA	False	AATACA	-33	NA	201955479	201970731	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_201955553_201957280_201957381_201957510_201957575_201962803_201962925_201963615_201963745_201965432_201965544_201969468
H1_mix_00002171	chr1	+	3162	3	FSM	ENSG00000134375.11	ENST00000482943.1	2523	3	-192	-447	-192	134	multi-exon	FALSE	canonical	3	826	junction_2	28.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACCCAGGCTGGAATGC	6513	False	NA	NA	False	CATAAA	-34	NA	201962023	201970798	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_201963745_201965432_201965544_201969468
H1_mix_00002172	chr1	+	2399	11	FSM	ENSG00000176393.11	ENST00000295640.9	2399	11	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_3	48.5423526417911	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACGGATTGAGTGACTAT	8	True	NA	20	True	AATAAA	-20	NA	201982647	202006143	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_201983114_201988903_201989045_201989382_201989532_201996146_201996264_201997318_201997555_201999901_202000016_202001375_202001489_202001658_202001768_202003236_202003462_202004353_202004497_202005557
H1_mix_00002178	chr1	+	3772	8	FSM	ENSG00000163435.16	ENST00000359651.7	4994	8	1222	0	1222	0	multi-exon	TRUE	canonical	3	74	junction_5	16.5220940512011	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTAGCTACCTGTGTAC	NA	False	NA	14	True	AATAAA	-27	NA	202009166	202016009	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_202011300_202011956_202012179_202012343_202012437_202012639_202012760_202012946_202013037_202013181_202013299_202013828_202014025_202015208
H1_mix_00002179	chr1	+	3104	9	FSM	ENSG00000163435.16	ENST00000367284.10	3104	9	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_6	17.1021745693347	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAAGCTTGTGTGTGGATT	2	True	NA	NA	False	GATAAA	-19	NA	202010586	202017183	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_202010707_202011128_202011300_202011956_202012179_202012343_202012437_202012639_202012760_202012946_202013037_202013181_202013299_202013828_202014025_202015208
H1_mix_00002182	chr1	+	15235	24	FSM	ENSG00000077157.22	ENST00000608999.6	15244	24	9	0	9	0	multi-exon	TRUE	canonical	2	3	junction_16	7.46864903021182	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACAGTGTCCCCTTCTCA	1	True	NA	NA	False	AATAAA	-20	NA	202348707	202592702	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_202349143_202416786_202416918_202422619_202422739_202425565_202425726_202427039_202427185_202428854_202428930_202430730_202430811_202431479_202431620_202434655_202434769_202437820_202438025_202440705_202440789_202442446_202442573_202448988_202449172_202488532_202488624_202493113_202493318_202495292_202495483_202495569_202495683_202496780_202496823_202558876_202558894_202562777_202562923_202564442_202564548_202567777_202567832_202569146_202569198_202580473
H1_mix_00002183	chr1	+	729	2	FSM	ENSG00000228288.8	ENST00000425295.2	705	2	-27	3	-10	0	multi-exon	FALSE	canonical	3	19	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATTTGTCTTTTTTCCGCG	16	False	NA	22	True	NA	NA	NA	202810865	202811912	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_202811371_202811688
H1_mix_00002184	chr1	+	949	1	FSM	ENSG00000228288.8	ENST00000688063.1	981	1	30	2	3	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTCTTTTTTCCGCGG	28	True	NA	23	True	NA	NA	NA	202810964	202811913	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_202811000_202811900
H1_mix_00002204	chr1	+	4737	20	NNC	ENSG00000058673.17	novel	3004	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_17	191.513435878227	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGTTGTGAGCTAAGTA	26	False	NA	17	True	AATAAA	-18	NA	203795653	203854124	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_203795776_203796292_203796497_203801574_203801629_203802956_203803017_203816925_203817125_203818569_203818690_203828298_203828423_203829450_203829655_203829779_203829897_203830122_203830204_203831660_203831772_203833790_203833854_203837965_203838065_203840305_203840375_203847183_203847688_203848330_203848408_203849710_203850021_203850514_203850682_203851056_203851125_203852140
H1_mix_00002205	chr1	+	4737	20	NIC	ENSG00000058673.17	novel	5015	20	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	189.91489565073	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGTTGTGAGCTAAGTA	51	False	NA	17	True	AATAAA	-18	NA	203795678	203854124	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_203795795_203796292_203796497_203801574_203801629_203802956_203803017_203816925_203817125_203818569_203818690_203828298_203828423_203829450_203829655_203829779_203829897_203830122_203830204_203831660_203831772_203833790_203833854_203837965_203838065_203840305_203840375_203847183_203847688_203848330_203848408_203849710_203850027_203850514_203850682_203851056_203851125_203852140
H1_mix_00002209	chr1	+	11834	18	FSM	ENSG00000058673.17	ENST00000639812.1	11825	18	-9	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	187.208245907172	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATGATCCTTTTCTAAAA	58	False	NA	NA	False	AATATA	-12	NA	203795685	203854999	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_203795776_203796450_203803017_203816925_203817125_203818569_203818690_203828298_203828423_203829450_203829655_203829779_203829897_203830122_203830204_203831660_203831772_203833790_203833854_203837965_203838065_203840305_203840375_203847183_203847688_203848330_203848408_203849710_203850027_203850514_203850682_203851056_203851125_203852140
H1_mix_00002210	chr1	+	4535	19	NNC	ENSG00000058673.17	novel	5917	18	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	194.129554552153	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGTTGTGAGCTAAGTA	60	False	NA	17	True	AATAAA	-18	NA	203795687	203854124	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_203795795_203801574_203801640_203802956_203803017_203816925_203817125_203818569_203818690_203828298_203828423_203829450_203829655_203829779_203829897_203830122_203830204_203831660_203831772_203833790_203833854_203837965_203838065_203840305_203840375_203847183_203847688_203848330_203848408_203849710_203850027_203850514_203850682_203851056_203851125_203852140
H1_mix_00002211	chr1	+	5880	18	NNC	ENSG00000058673.17	novel	5917	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	56	junction_15	159.099216068569	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGTTGTGAGCTAAGTA	26	False	NA	17	True	AATAAA	-18	NA	203795653	203854124	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_203795795_203801574_203803017_203816925_203817125_203818569_203818690_203828298_203828423_203829450_203829655_203829779_203829897_203830122_203830204_203831660_203831772_203833790_203833854_203837965_203838065_203840305_203840375_203847183_203847688_203848330_203848408_203849710_203850021_203850514_203850682_203851056_203851125_203852140
H1_mix_00002212	chr1	+	3284	14	NIC	ENSG00000058673.17	novel	3004	20	NA	NA	2	-132	intron_retention	FALSE	canonical	3	61	junction_1	161.372735501737	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACGCTGGAAGAAATTAAA	69	False	NA	NA	False	AAAACA	-26	NA	203795696	203847555	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_203795776_203796292_203796497_203801574_203803017_203816925_203817125_203818569_203818690_203828298_203828423_203829450_203829655_203829779_203829897_203830122_203830204_203831660_203831772_203833790_203833854_203837965_203838065_203840305_203840375_203847183
H1_mix_00002215	chr1	+	12481	17	FSM	ENSG00000257315.3	ENST00000550078.2	12481	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	151.842434780268	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATGATCCTTTTCTAAAA	86	False	NA	NA	False	AATATA	-12	NA	203795713	203854999	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_203803017_203816925_203817125_203818569_203818690_203828298_203828423_203829450_203829655_203829779_203829897_203830122_203830204_203831660_203831772_203833790_203833854_203837965_203838065_203840305_203840375_203847183_203847688_203848330_203848408_203849710_203850027_203850514_203850682_203851056_203851125_203852140
H1_mix_00002218	chr1	+	971	4	FSM	ENSG00000182004.13	ENST00000483099.5	967	4	-4	0	0	0	multi-exon	FALSE	canonical	3	6601	junction_1	458.779055997789	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTACATTGCTTCTTAC	5	True	NA	25	True	AATAAA	-25	NA	203861598	203870081	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_203862223_203863662_203863726_203865040_203865120_203869876
H1_mix_00002219	chr1	+	732	5	FSM	ENSG00000182004.13	ENST00000475035.5	532	5	-200	0	-196	0	multi-exon	FALSE	canonical	3	191	junction_1	2992.05660875592	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACATTGCTTCTTACTAT	NA	False	NA	28	True	AATAAA	-28	NA	203861402	203870084	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_203861744_203862181_203862223_203863662_203863726_203865040_203865120_203869876
H1_mix_00002224	chr1	+	9987	10	FSM	ENSG00000198625.14	ENST00000391947.6	10008	10	21	0	-6	0	multi-exon	TRUE	canonical	3	5	junction_5	9.49203694852157	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGTTGTCATTATTT	-2	True	NA	20	True	ATTAAA	-17	NA	204516399	204558119	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_204516510_204525483_204525597_204526359_204526435_204530683_204530818_204532190_204532247_204538208_204538309_204542783_204542945_204544534_204544685_204546796_204546878_204549112
H1_mix_00002225	chr1	+	9881	10	FSM	ENSG00000198625.14	ENST00000454264.6	9926	10	45	0	18	0	multi-exon	FALSE	canonical	1	1	junction_8	10.7577132821863	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGTTGTCATTATTT	22	True	NA	20	True	ATTAAA	-17	NA	204516423	204558119	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_204516510_204525483_204525597_204526359_204526435_204530683_204530818_204532190_204532247_204537429_204537498_204538208_204538309_204542783_204542945_204546796_204546878_204549112
H1_mix_00002226	chr1	+	10056	11	FSM	ENSG00000198625.14	ENST00000367182.8	10050	11	-6	0	-6	0	multi-exon	FALSE	canonical	3	25	junction_6	4.1821047332653	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGTTGTCATTATTTT	-2	True	NA	21	True	ATTAAA	-18	NA	204516399	204558120	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_204516510_204525483_204525597_204526359_204526435_204530683_204530818_204532190_204532247_204537429_204537498_204538208_204538309_204542783_204542945_204544534_204544685_204546796_204546878_204549112
H1_mix_00002230	chr1	+	2462	16	FSM	ENSG00000163531.17	ENST00000403080.5	2462	16	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	13.8740365030833	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAAGACTGAGTTTGTG	20	True	NA	5	True	ATTAAA	-14	NA	204828694	204977139	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_204828783_204920631_204920741_204944225_204944407_204950556_204950575_204952010_204952117_204954187_204954385_204954828_204954952_204957655_204957827_204968248_204968361_204968797_204968983_204970615_204970748_204973275_204973420_204974178_204974291_204974656_204974824_204975270_204975419_204976670
H1_mix_00002231	chr1	+	2331	14	NIC	ENSG00000163531.17	novel	4126	27	NA	NA	17	7	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	16.1505491140825	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGAGTTTGTGTTTGTGC	NA	False	NA	12	True	ATTAAA	-21	NA	204929425	204977146	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_204929503_204944225_204944407_204952010_204952117_204954187_204954385_204954828_204954952_204957655_204957827_204968248_204968361_204968797_204968983_204970615_204970748_204973275_204973420_204974178_204974291_204974656_204974824_204975270_204975419_204976670
H1_mix_00002237	chr1	+	2986	16	FSM	ENSG00000117266.16	ENST00000429964.7	2986	16	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	12.397132284883	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCGAGCAGTCTCGTACA	-24	True	NA	22	True	AATATA	-20	NA	205504668	205532790	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_205504797_205523146_205523298_205523482_205523626_205524231_205524358_205525138_205525196_205526064_205526180_205526366_205526462_205526774_205526838_205527793_205527918_205528047_205528169_205528998_205529097_205529323_205529430_205529520_205529564_205530258_205530350_205530627_205530706_205531343
H1_mix_00002241	chr1	+	2484	12	FSM	ENSG00000266028.8	ENST00000605476.5	2484	12	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	12.943615804042	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAGGTTTCCCAGATCTC	NA	False	NA	12	True	AATAAA	-24	NA	206406376	206456159	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_206406575_206415888_206415974_206419372_206419401_206421249_206421275_206430161_206430223_206436964_206437043_206437963_206438099_206439975_206440082_206446074_206446300_206450385_206450466_206453199_206453381_206454877
H1_mix_00002244	chr1	+	678	5	FSM	ENSG00000263528.8	ENST00000579827.6	678	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	6.12372435695795	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAATGTTCACAGCAGCA	156	False	NA	5	True	ATTAAA	-17	NA	206470641	206475135	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_206470699_206471155_206471246_206473195_206473315_206474330_206474472_206474864
H1_mix_00002247	chr1	+	2171	10	FSM	ENSG00000162889.11	ENST00000294981.8	2171	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_9	15.3437967519591	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGGTTCTGGCCACCC	28	True	NA	NA	False	NA	NA	NA	206684943	206732863	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_206685509_206728709_206728850_206729034_206729100_206729395_206729476_206729971_206730099_206730687_206730764_206731137_206731263_206731639_206731726_206731838_206731920_206732037
H1_mix_00002253	chr1	+	3334	13	FSM	ENSG00000117335.20	ENST00000367042.6	3320	13	-14	0	-14	0	multi-exon	FALSE	canonical	3	45	junction_12	247.993223473725	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTCATGATGATGTGT	NA	False	NA	14	True	AATAAA	-15	NA	207752039	207795504	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207767778_207767824_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207790252_207790346_207793518
H1_mix_00002255	chr1	+	3205	11	FSM	ENSG00000117335.20	ENST00000357714.5	3188	11	-17	0	-14	0	multi-exon	FALSE	canonical	3	131	junction_6	192.788718549608	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATGTGTTTATTTCTA	NA	False	NA	23	True	AATAAA	-24	NA	207752039	207795513	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207793518
H1_mix_00002256	chr1	+	3388	14	FSM	ENSG00000117335.20	ENST00000358170.6	3371	14	-17	0	-14	0	multi-exon	FALSE	canonical	3	38	junction_6	294.310507043519	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATGTGTTTATTTCTA	NA	False	NA	23	True	AATAAA	-24	NA	207752039	207795513	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207767606_207767652_207767778_207767824_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207790252_207790346_207793518
H1_mix_00002257	chr1	+	3295	13	FSM	ENSG00000117335.20	ENST00000322875.8	3278	13	-17	0	-14	0	multi-exon	FALSE	canonical	3	38	junction_6	247.231448017619	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATGTGTTTATTTCTA	NA	False	NA	23	True	AATAAA	-24	NA	207752039	207795513	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207767606_207767652_207767778_207767824_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207793518
H1_mix_00002259	chr1	+	7847	9	FSM	ENSG00000117335.20	ENST00000469535.5	7826	9	-23	2	-9	-2	multi-exon	FALSE	canonical	3	386	junction_8	126.657448951888	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATGATGTGTTTATTTC	NA	False	NA	21	True	AATAAA	-22	NA	207752044	207795511	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207761447_207767012_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207793518
H1_mix_00002264	chr1	+	2758	4	ISM	ENSG00000117335.20	ENST00000462968.2	473	6	12320	-280	12320	0	intron_retention	FALSE	canonical	3	386	junction_3	201.191451110627	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTCATGATGATGTGT	2725	False	NA	14	True	AATAAA	-15	NA	207782658	207795504	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_207783331_207785070_207785107_207785618_207785683_207793518
H1_mix_00002265	chr1	+	5320	3	NIC	ENSG00000117335.20	novel	3320	13	NA	NA	11498	0	intron_retention	FALSE	canonical	3	386	junction_2	220.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTCATGATGATGTGT	1903	False	NA	14	True	AATAAA	-15	NA	207781836	207795504	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_207785107_207785618_207785683_207793518
H1_mix_00002266	chr1	+	929	4	FSM	ENSG00000230937.13	ENST00000431096.6	926	4	-3	0	0	0	multi-exon	TRUE	canonical	3	22	junction_2	13.4742552876052	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	-4	True	NA	21	True	ACTAAA	-21	NA	209428816	209432549	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_209429089_209429180_209429409_209431742_209431826_209432203
H1_mix_00002268	chr1	+	1073	4	FSM	ENSG00000230937.13	ENST00000451937.6	1072	4	-1	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	8.80656320908194	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	-4	True	NA	21	True	ACTAAA	-21	NA	209428816	209432549	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_209429409_209430424_209430477_209431742_209431826_209432203
H1_mix_00002269	chr1	+	1007	5	FSM	ENSG00000230937.13	ENST00000429156.6	1007	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	15.3704261489394	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTGCCTCTATGTTTTA	-4	True	NA	23	True	ACTAAA	-23	NA	209428816	209432551	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_209429089_209429180_209429409_209430424_209430501_209431742_209431826_209432203
H1_mix_00002270	chr1	+	967	5	NIC	ENSG00000230937.13	novel	1007	5	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	25	junction_3	10.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAAAAGCCTCTCTGCCT	2	True	NA	13	True	ACTAAA	-13	NA	209428822	209432541	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_209429089_209429180_209429409_209430424_209430477_209431742_209431826_209432203
H1_mix_00002271	chr1	+	1003	3	NIC	ENSG00000230937.13	novel	1072	4	NA	NA	6	-2	intron_retention	FALSE	canonical	3	22	junction_1	11.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAAGCCTCTCTGCCTCT	8	True	NA	15	True	ACTAAA	-15	NA	209428828	209432543	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_209429409_209431742_209431826_209432203
H1_mix_00002272	chr1	+	704	4	FSM	ENSG00000230937.13	ENST00000366437.7	704	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	21.7715410570772	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	190	False	NA	21	True	ACTAAA	-21	NA	209429010	209432549	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_209429089_209429180_209429409_209430424_209430477_209432203
H1_mix_00002286	chr1	+	1841	11	NNC	ENSG00000117625.14	novel	1827	11	NA	NA	6	-5	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	44.650195968215	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAACACTGGTGTTATGTT	-13	True	NA	8	True	AATAAA	-18	NA	211259371	211313293	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_211259730_211260107_211260165_211271231_211271310_211274209_211274263_211276256_211276419_211278116_211278242_211279237_211279317_211289177_211289397_211295675_211295754_211304082_211304141_211312719
H1_mix_00002287	chr1	+	4423	13	NIC	ENSG00000117625.14	novel	4474	12	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	51	junction_11	44.8320167092918	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTAATGTAGGCCTACA	-1	True	NA	10	True	AATAAA	-21	NA	211259552	211316388	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_211259727_211260107_211260165_211271231_211271310_211274209_211274263_211276256_211276419_211278116_211278242_211279237_211279317_211289177_211289397_211295675_211295754_211304082_211304141_211312354_211312488_211312719_211312962_211313423
H1_mix_00002289	chr1	+	4263	11	FSM	ENSG00000117625.14	ENST00000367005.8	4246	11	-17	0	11	0	multi-exon	FALSE	canonical	3	146	junction_4	18.8703471086252	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCTTAATGTAGGCCT	-6	True	NA	7	True	AATAAA	-18	NA	211259957	211316385	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_211260165_211271231_211271310_211274209_211274263_211276256_211276419_211278116_211278242_211279237_211279317_211289177_211289397_211295675_211295754_211304082_211304141_211312719_211312962_211313423
H1_mix_00002293	chr1	+	3976	11	FSM	ENSG00000082512.15	ENST00000261464.10	3976	11	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_8	24.3918019014586	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTTGTGATTTTTGTTTT	15	True	NA	25	True	AGTAAA	-22	NA	211326832	211374946	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_211326890_211353238_211353458_211354409_211354468_211356366_211356469_211359911_211360077_211360701_211360780_211361087_211361163_211365375_211365469_211369451_211369593_211371301_211371471_211372127
H1_mix_00002294	chr1	+	2460	11	NNC	ENSG00000082512.15	novel	3976	11	NA	NA	25	-362	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_8	33.8502584923661	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGACTCACTGTTGCAG	2	True	NA	NA	False	NA	NA	NA	211326857	211372433	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_211326890_211353238_211353458_211354409_211354468_211356366_211356469_211359911_211360077_211360701_211360780_211361087_211361163_211365375_211366491_211369451_211369593_211371301_211371471_211372127
H1_mix_00002295	chr1	+	3531	6	FSM	ENSG00000153363.14	ENST00000423222.6	3536	6	5	0	3	0	multi-exon	FALSE	canonical	3	50	junction_4	101.40808646257	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTGTTTCTTTTTTCCA	-35	True	NA	NA	False	AATAAA	-19	NA	211382779	211435333	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_211382926_211391615_211391698_211391826_211391977_211396766_211396832_211426210_211426284_211432318
H1_mix_00002296	chr1	+	2142	7	NIC	ENSG00000153363.14	novel	807	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_4	109.931418014445	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTGTTTTTGAAGGCC	-43	True	NA	8	True	AATAAA	-14	NA	211382771	211432534	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_211382926_211391615_211391698_211391826_211391977_211396766_211396832_211398035_211399438_211426210_211426284_211432318
H1_mix_00002303	chr1	+	930	3	FSM	ENSG00000117691.10	ENST00000479589.5	845	3	-77	-8	-74	1	multi-exon	FALSE	canonical	3	58	junction_1	327	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTCCCCAGAGGCCAT	NA	False	NA	28	True	AATAAA	-23	NA	212432845	212446380	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_212433121_212444338_212444443_212445829
H1_mix_00002305	chr1	+	3189	3	FSM	ENSG00000162772.17	ENST00000465155.5	1626	3	-35	-1528	7	0	multi-exon	FALSE	canonical	3	8	junction_1	5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGTTGTGCTGGTTTCT	1575	False	NA	14	True	AATAAA	-24	NA	212608634	212620775	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_212608931_212615017_212615262_212618126
H1_mix_00002306	chr1	+	1940	4	FSM	ENSG00000162772.17	ENST00000341491.9	1940	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	5.55777733351102	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGTTGTGCTGGTTTCT	1	True	NA	14	True	AATAAA	-24	NA	212608760	212620775	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_212608931_212615017_212615262_212618126_212618235_212619357
H1_mix_00002309	chr1	+	2321	10	FSM	ENSG00000203705.11	ENST00000366973.8	2321	10	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_8	76.4038975154773	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAGTGATTTTATGAAAT	-10	True	NA	-1	True	AATAAA	-10	NA	212791883	212816617	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_212791988_212795094_212795128_212796516_212796591_212797111_212797197_212802700_212802764_212804319_212804430_212804595_212804652_212807735_212807849_212812250_212812329_212815012
H1_mix_00002313	chr1	+	5932	11	NNC	ENSG00000162769.13	novel	5919	10	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	42	junction_10	95.4937170708105	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTGACTTTTTGAAA	-3	True	NA	19	True	AATAAA	-19	NA	212858237	212899363	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_212859191_212863724_212863870_212872677_212872819_212883370_212883439_212885292_212885397_212887890_212888002_212888488_212888595_212889145_212889258_212894985_212895054_212895215_212897167_212897190
H1_mix_00002315	chr1	+	3209	4	ISM	ENSG00000162769.13	ENST00000483790.1	599	6	2336	0	2336	0	3prime_fragment	FALSE	canonical	3	343	junction_1	24.2395452835971	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACACTTACTTGAAAATTA	NA	False	NA	-2	True	NA	NA	NA	212885744	212895394	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_212888595_212889145_212889258_212894985_212895054_212895215
H1_mix_00002318	chr1	+	582	3	FSM	ENSG00000143494.16	ENST00000490792.1	581	3	-1	0	0	0	multi-exon	FALSE	canonical	3	205	junction_1	47.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGGTCAGTGGCTTCCA	0	True	NA	NA	False	NA	NA	NA	212950593	212951812	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_212950741_212951181_212951393_212951588
H1_mix_00002319	chr1	+	764	7	NNC	ENSG00000143494.16	novel	4224	9	NA	NA	-1	-1746	at_least_one_novel_splicesite	FALSE	canonical	3	156	junction_6	329.10505752554	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGTTCATCCCTTTAT	23	False	NA	12	True	AATAAA	-22	NA	212950616	212971172	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_212950741_212951338_212951393_212951588_212951819_212961165_212961255_212965721_212965779_212966270_212966346_212971037
H1_mix_00002320	chr1	+	953	6	NNC	ENSG00000143494.16	novel	2960	6	NA	NA	-1	-1753	intron_retention	FALSE	canonical	3	156	junction_5	310.438399686637	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTACATTTTGTTCATC	23	False	NA	5	True	AATAAA	-15	NA	212950616	212971165	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_212950741_212951338_212951819_212961165_212961255_212965721_212965779_212966270_212966346_212971037
H1_mix_00002323	chr1	+	4232	8	NIC	ENSG00000143494.16	novel	4224	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	162	junction_4	302.67845132741	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTGTTTTTCTTCTAAAT	-9	True	NA	23	True	AATAAA	-19	NA	212950634	212991585	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_212950741_212951338_212951393_212951588_212951819_212961165_212961361_212966270_212966346_212972579_212972962_212973954_212974071_212988511
H1_mix_00002324	chr1	+	4308	9	NIC	ENSG00000143494.16	novel	4224	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	205	junction_1	255.426970972135	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTGTTTTTCTTCTAAAT	23	False	NA	23	True	AATAAA	-19	NA	212950666	212991585	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_212950741_212951181_212951393_212951588_212951819_212961165_212961255_212965721_212965779_212966270_212966346_212972579_212972962_212973954_212974071_212988511
H1_mix_00002326	chr1	+	4219	15	FSM	ENSG00000136643.12	ENST00000543470.5	4227	15	8	0	0	0	multi-exon	TRUE	canonical	2	2	junction_3	50.6006775787496	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTCTTCTTCATTTAAT	-47	True	NA	18	True	AATAAA	-15	NA	213051240	213273464	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_213051510_213071005_213071042_213072869_213072987_213077695_213077817_213104453_213104570_213117316_213117411_213129526_213129890_213167857_213167974_213230496_213230545_213232122_213232256_213240701_213242298_213242568_213242659_213261557_213261641_213262720_213262817_213272523
H1_mix_00002327	chr1	+	5468	14	FSM	ENSG00000136643.12	ENST00000366959.4	5454	14	-14	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	35.919041117392	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTTCTCATTTGATTTT	-47	True	NA	NA	False	CATAAA	-14	NA	213051240	213274773	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_213051510_213077695_213077817_213104453_213104570_213117316_213117411_213129526_213129890_213167857_213167974_213176399_213176493_213230496_213230545_213232122_213232256_213240701_213242298_213242568_213242659_213261557_213261641_213262720_213262817_213272523
H1_mix_00002330	chr1	+	1801	12	FSM	ENSG00000143499.14	ENST00000366957.10	1745	12	-57	1	0	0	multi-exon	FALSE	canonical	3	41	junction_4	4.94097390607316	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGAGGTTTGTATTTTCT	6	True	NA	20	True	ATTAAA	-12	NA	214281101	214337130	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_214281428_214305186_214305251_214314761_214314873_214318078_214318140_214318858_214318984_214324640_214324709_214327621_214327725_214330167_214330279_214330949_214331071_214332017_214332193_214334199_214334309_214336703
H1_mix_00002344	chr1	+	5087	18	FSM	ENSG00000116141.17	ENST00000677041.1	5087	18	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	32.4836930077029	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTATGTGATACCAGGATT	45	False	NA	-80	True	AATAAA	-19	NA	220528376	220664373	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_220528874_220576645_220576737_220579353_220579558_220581064_220581119_220598330_220598380_220599797_220599864_220604066_220604138_220615938_220615996_220618309_220618547_220618635_220618756_220631034_220631135_220632200_220632314_220635375_220635530_220635832_220636027_220650619_220650721_220651985_220652151_220653100_220653353_220661811
H1_mix_00002355	chr1	+	2750	23	FSM	ENSG00000154305.18	ENST00000340535.11	2735	23	-15	0	-15	0	multi-exon	FALSE	canonical	3	35	junction_1	50.5591871469338	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGTCCTTACAACTTTGAA	-42	True	NA	22	True	AATAAA	-19	NA	222644287	222665823	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_222644587_222645553_222645686_222648828_222648851_222650291_222650381_222650633_222650712_222650792_222650904_222651976_222652049_222652227_222652333_222653007_222653131_222653227_222653340_222654242_222654299_222654388_222654480_222654654_222654794_222658721_222658824_222659452_222659514_222659621_222659658_222659733_222659802_222659905_222660007_222660176_222660315_222662055_222662125_222662252_222662333_222663997_222664149_222665308
H1_mix_00002357	chr1	+	298	2	FSM	ENSG00000154305.18	ENST00000479370.1	298	2	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTGAGCGTCCAGTAGC	6843	False	NA	NA	False	NA	NA	NA	222662082	222662508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_222662125_222662252
H1_mix_00002358	chr1	+	774	2	FSM	ENSG00000162819.12	ENST00000496267.1	782	2	0	8	0	-8	multi-exon	FALSE	canonical	3	34	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAGCACTTAATGTAGGC	0	True	NA	99	True	AATAAA	-9	NA	222712558	222713977	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_222712943_222713587
H1_mix_00002370	chr1	+	3384	21	FSM	ENSG00000162909.18	ENST00000295006.6	3366	21	-184	166	-184	-164	multi-exon	FALSE	canonical	2	100	junction_10	17.2808419933752	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCCTTCCTGGAGGGC	NA	False	NA	20	True	AATAAA	-36	NA	223712354	223775852	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_223712878_223717761_223717832_223744099_223744219_223745305_223745440_223746996_223747166_223749038_223749123_223750889_223750976_223751996_223752072_223752795_223752957_223755479_223755650_223757368_223757381_223759269_223759482_223761580_223761618_223762185_223762252_223764149_223764208_223766366_223766432_223769840_223769910_223770446_223770526_223771808_223771926_223772180_223772240_223774833
H1_mix_00002382	chr1	+	830	5	FSM	ENSG00000143771.12	ENST00000366856.3	808	5	-22	0	0	0	multi-exon	FALSE	canonical	3	73	junction_4	1612.38929852564	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATTGTGGTGTTCTATT	-23	True	NA	NA	False	AATAAA	-24	NA	224356870	224379452	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_224356994_224360494_224360564_224365878_224365992_224371282_224371424_224379068
H1_mix_00002388	chr1	+	1192	8	NIC	ENSG00000185842.16	novel	1984	11	NA	NA	-17	-3	combination_of_known_junctions	FALSE	canonical	3	98	junction_6	63.0484102957111	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTATGCCTGTCTTTACT	2	True	NA	13	True	AATAAA	-13	NA	224929636	224969826	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_224929836_224952669_224952780_224954958_224955099_224960152_224960303_224964478_224964610_224967430_224967584_224968758_224968875_224969633
H1_mix_00002389	chr1	+	3074	6	ISM	ENSG00000185842.16	ENST00000366850.7	1103	7	28	-1903	7	-3	intron_retention	FALSE	canonical	3	212	junction_1	21.1792351136673	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTATGCCTGTCTTTACT	11	True	NA	13	True	AATAAA	-13	NA	224929688	224969826	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_224929836_224952669_224952780_224954958_224955099_224960152_224960303_224964478_224964610_224967430
H1_mix_00002391	chr1	+	2960	3	FSM	ENSG00000143742.14	ENST00000650651.1	548	3	-214	-2198	-197	0	multi-exon	FALSE	canonical	3	27	junction_2	3405	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTGTTTGTGTTGAAGT	2648	False	NA	12	True	AATAAA	-16	NA	225777615	225790464	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_225778013_225783299_225783369_225787970
H1_mix_00002392	chr1	+	1494	3	FSM	ENSG00000143742.14	ENST00000304786.12	1481	3	-13	0	0	0	multi-exon	FALSE	canonical	3	5637	junction_2	600	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTGTTTGTGTTGAAGT	2845	False	NA	12	True	AATAAA	-16	NA	225777812	225790464	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_225778013_225783299_225783369_225789239
H1_mix_00002393	chr1	+	1420	3	FSM	ENSG00000143742.14	ENST00000651761.1	1420	3	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_2	3368	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGTGTTGAAGTTTTT	38	False	NA	16	True	AATAAA	-20	NA	225777871	225790468	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_225778013_225783299_225783369_225789258
H1_mix_00002398	chr1	+	1072	4	FSM	ENSG00000163041.13	ENST00000366815.10	1070	4	-2	0	0	0	multi-exon	TRUE	canonical	3	5189	junction_1	438.291632997432	2593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAGCCTTGCCCTACAAT	-2	True	NA	NA	False	ATTAAA	-33	NA	226062713	226072019	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_226062812_226064328_226064480_226065655_226065810_226071350
H1_mix_00002399	chr1	+	1830	3	FSM	ENSG00000163041.13	ENST00000366814.3	1863	3	0	33	0	-33	multi-exon	FALSE	canonical	3	5189	junction_1	532	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTAAAATTATTCACATG	-2	True	NA	NA	False	ACTAAA	-23	NA	226062713	226067236	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_226062812_226064328_226064480_226065655
H1_mix_00002400	chr1	+	1050	4	NNC	ENSG00000163041.13	novel	1070	4	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	canonical	3	278	junction_3	2602.36307143249	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCTTTTGGTCTTTATT	-1	True	NA	NA	False	ATTAAA	-15	NA	226062714	226072001	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_226062812_226064328_226064480_226065655_226065810_226071353
H1_mix_00002408	chr1	+	2278	13	FSM	ENSG00000143801.18	ENST00000366783.8	2249	13	-41	12	3	0	multi-exon	FALSE	canonical	3	85	junction_10	21.2895057611856	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGTTAGAATCTTGGAG	NA	False	NA	4	True	AATAAA	-8	NA	226870574	226896086	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_226870650_226871261_226871405_226875364_226875551_226881887_226882049_226883704_226883920_226885537_226885680_226888090_226888159_226888828_226889050_226890034_226890134_226891277_226891362_226891742_226891845_226894006_226894126_226895423
H1_mix_00002413	chr1	+	8548	4	FSM	ENSG00000181450.18	ENST00000343776.10	8543	4	-5	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	7.25718035235908	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACTTGTTTTCTTTAACA	-1	True	NA	18	True	AATAAA	-18	NA	227563550	227662461	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_227563725_227646543_227646671_227650955_227651077_227654335
H1_mix_00002415	chr1	+	8491	4	FSM	ENSG00000181450.18	ENST00000440339.1	798	4	0	-7693	0	0	multi-exon	FALSE	canonical	3	32	junction_3	10.3387082795139	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACTTGTTTTCTTTAACA	28	False	NA	18	True	AATAAA	-18	NA	227563579	227662461	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_227563725_227582513_227582607_227646543_227646671_227654335
H1_mix_00002418	chr1	+	2408	5	FSM	ENSG00000143740.15	ENST00000426344.6	2403	5	-5	0	0	0	multi-exon	FALSE	canonical	3	4	junction_4	110.504242000025	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCAGCTGGTCTTAGTCA	-17	True	NA	NA	False	AATAAA	-20	NA	227735430	227776969	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_227735500_227747691_227748234_227758994_227759486_227766958_227767084_227775788
H1_mix_00002419	chr1	+	1867	4	FSM	ENSG00000143740.15	ENST00000418653.6	1867	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	129.213862345424	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCAGCTGGTCTTAGTCAC	-17	True	NA	NA	False	AATAAA	-21	NA	227735430	227776970	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_227735500_227758994_227759486_227766958_227767084_227775788
H1_mix_00002420	chr1	+	1914	5	FSM	ENSG00000143740.15	ENST00000617596.5	1923	5	-9	18	-2	0	multi-exon	TRUE	canonical	3	216	junction_1	25.460754112948	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAAATGCTGGCTTCAGA	-22	True	NA	15	True	NA	NA	NA	227735425	227781208	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_227735500_227747691_227748234_227758994_227759486_227766958_227767084_227780526
H1_mix_00002429	chr1	+	1114	9	FSM	ENSG00000143774.17	ENST00000312726.9	1100	9	-14	0	0	0	multi-exon	FALSE	canonical	3	320	junction_1	437.22905896109	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGAGTGGAATGTGGCC	-28	True	NA	NA	False	AATAAA	-25	NA	228140264	228148951	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_228140364_228141123_228141289_228145510_228145625_228146025_228146068_228146841_228146939_228147405_228147545_228147614_228147700_228148370_228148457_228148664
H1_mix_00002430	chr1	+	1076	9	FSM	ENSG00000143774.17	ENST00000492871.5	1065	9	-11	0	0	0	multi-exon	FALSE	canonical	3	81	junction_4	534.98257857149	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCATAAATGAGTGGAATG	-14	True	NA	NA	False	AATAAA	-20	NA	228140278	228148946	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_228140364_228141123_228141289_228145510_228145625_228146025_228146068_228146860_228146939_228147405_228147545_228147614_228147700_228148370_228148457_228148664
H1_mix_00002431	chr1	+	853	7	FSM	ENSG00000143774.17	ENST00000366728.6	842	7	-11	0	0	0	multi-exon	FALSE	canonical	3	51	junction_6	485.258264569841	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGGAATGTGGCCCCAA	-14	True	NA	NA	False	AATAAA	-29	NA	228140278	228148955	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_228140364_228145510_228145625_228146025_228146068_228146841_228146939_228147405_228147545_228147614_228147700_228148664
H1_mix_00002433	chr1	+	1275	8	FSM	ENSG00000143774.17	ENST00000366718.5	1275	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	469.172349864686	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGAGTGGAATGTGGCC	3967	False	NA	NA	False	AATAAA	-25	NA	228144327	228148951	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_228144753_228145510_228145625_228146025_228146068_228146841_228146939_228147405_228147545_228147614_228147700_228148370_228148457_228148664
H1_mix_00002435	chr1	+	915	7	FSM	ENSG00000143774.17	ENST00000366716.1	940	7	0	25	0	4	multi-exon	FALSE	canonical	3	1282	junction_3	64.5998366011005	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATGTGGCCCCAAGGTT	422	False	NA	NA	False	AATAAA	-33	NA	228145453	228148959	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_228145625_228146025_228146068_228146841_228146939_228147405_228147545_228147614_228147700_228148370_228148457_228148664
H1_mix_00002441	chr1	+	328	2	FSM	ENSG00000154358.23	ENST00000602832.1	372	2	44	0	44	0	multi-exon	FALSE	canonical	2	3	junction_1	0	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAGAAGGGGCCACGGCC	NA	False	NA	NA	False	NA	NA	NA	228303652	228304344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_228303939_228304302
H1_mix_00002445	chr1	+	2232	7	FSM	ENSG00000154358.23	ENST00000664862.1	2238	7	6	0	6	0	multi-exon	FALSE	canonical	1	3	junction_3	1.82574185835055	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGCTGGGGGTCGCTGCA	2040	False	NA	-35	True	NA	NA	NA	228374923	228378822	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_228376179_228376792_228376875_228377051_228377292_228377488_228377713_228377930_228378007_228378270_228378421_228378617
H1_mix_00002450	chr1	+	2987	8	FSM	ENSG00000168118.12	ENST00000366690.5	2987	8	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_2	43.5524548852371	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTGTAATTTGTACTGT	-34	True	NA	NA	False	TTTAAA	-30	NA	229271110	229305894	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_229271371_229286485_229286567_229288728_229288844_229295847_229295911_229297481_229297637_229298976_229299073_229302861_229302990_229303805
H1_mix_00002453	chr1	+	6731	10	FSM	ENSG00000135763.10	ENST00000258243.7	5601	10	0	-1130	0	1130	multi-exon	FALSE	canonical	3	114	junction_1	19.6135503676589	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGTGCTGAAAGTTCTG	23	True	NA	NA	False	NA	NA	NA	229626246	229661330	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_229626357_229627620_229627760_229632268_229632446_229634916_229638248_229643532_229643694_229645858_229645970_229647509_229647753_229651234_229651323_229654248_229654389_229659099
H1_mix_00002458	chr1	+	2947	18	FSM	ENSG00000135775.14	ENST00000366669.9	2932	18	-15	0	-15	0	multi-exon	FALSE	canonical	3	163	junction_14	22.5446884160892	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGTGTGCTCGTTTTCT	-32	True	NA	15	True	AATAAA	-15	NA	230642465	230693982	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_230642679_230659463_230659626_230660757_230660824_230663140_230663222_230664483_230664588_230668675_230668785_230669355_230669536_230671515_230671641_230674997_230675125_230678912_230679053_230683573_230683636_230685084_230685237_230686934_230687133_230688070_230688144_230688419_230688563_230690013_230690154_230691383_230691565_230693291
H1_mix_00002459	chr1	+	2843	18	FSM	ENSG00000135775.14	ENST00000366668.7	2843	18	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_14	42.2621576046222	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGTGTGCTCGTTTTCT	21	False	NA	15	True	AATAAA	-15	NA	230642566	230693982	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_230642679_230659463_230659626_230660757_230660824_230663140_230663222_230664483_230664588_230668675_230668785_230669355_230669536_230671515_230671641_230674997_230675125_230678912_230679053_230683573_230683636_230685084_230685237_230686934_230687133_230688070_230688144_230688422_230688563_230690013_230690154_230691383_230691565_230693291
H1_mix_00002466	chr1	+	2654	16	FSM	ENSG00000116906.13	ENST00000366647.9	2641	16	-16	3	-11	-3	multi-exon	FALSE	canonical	3	387	junction_9	45.7906346562506	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTACAAATTTGAAAGAGATA	-17	True	NA	57	True	ATTAAA	-15	NA	231241195	231277970	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_231241457_231250960_231251144_231260506_231260684_231262722_231262853_231265292_231265421_231265711_231265788_231266013_231266166_231266276_231266408_231267679_231267904_231270757_231271001_231272311_231272392_231273921_231274063_231275220_231275321_231275404_231275499_231276134_231276197_231277498
H1_mix_00002473	chr1	+	7305	6	NNC	ENSG00000235152.1	novel	818	3	NA	NA	-41620	6172	at_least_one_novel_splicesite	TRUE	canonical	3	25	junction_3	14.5684590811795	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCGACTCCAGGGTGAAA	6	False	NA	NA	False	NA	NA	NA	232118470	232191815	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_232118714_232152075_232152169_232160170_232160224_232177207_232177267_232183937_232184078_232185098
H1_mix_00002476	chr1	+	786	4	FSM	ENSG00000135778.12	ENST00000494689.5	767	4	-19	0	-19	0	multi-exon	FALSE	canonical	3	195	junction_1	198.570446497514	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATGCACATGATTTGGGT	-39	True	NA	49	True	NA	NA	NA	232950585	232978482	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_232950745_232956346_232956444_232969908_232970119_232978162
H1_mix_00002477	chr1	+	904	3	FSM	ENSG00000135778.12	ENST00000496662.5	882	3	-22	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	315	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTAGGTCATCTCCCC	-14	True	NA	-55	True	AAGAAA	-2	NA	232950610	232978722	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_232950745_232969908_232970119_232978162
H1_mix_00002479	chr1	+	6330	5	FSM	ENSG00000135778.12	ENST00000366628.10	6324	5	-6	0	0	0	multi-exon	FALSE	canonical	3	510	junction_2	47.1824914560476	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGTTGTCTTATTTTC	-20	True	NA	16	True	TATAAA	-16	NA	232950604	232983882	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_232950745_232955556_232955720_232956346_232956444_232969908_232970119_232978162
H1_mix_00002480	chr1	+	791	3	NIC	ENSG00000135778.12	novel	980	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_2	73	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTTACTGCTTAATAAAT	15	True	NA	-26	True	AAGAAA	-31	NA	232950639	232978751	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_232950745_232956346_232956444_232978162
H1_mix_00002483	chr1	+	3910	6	FSM	ENSG00000143674.11	ENST00000366623.7	3910	6	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_4	11.4472704170033	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATTCAAGATTGTTACAC	0	True	NA	NA	False	AATAAA	-13	NA	233327767	233374134	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_233328834_233346441_233346623_233353806_233353956_233354835_233355012_233362052_233362294_233372037
H1_mix_00002487	chr1	+	2933	7	FSM	ENSG00000183780.13	ENST00000366617.3	2762	7	-171	0	-171	0	multi-exon	FALSE	canonical	3	15	junction_3	14.6704540564436	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTTCAGTGCTGTCTCCAT	NA	False	NA	20	True	AATAAA	-16	NA	234214099	234324511	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_234214575_234231416_234231742_234309100_234309321_234316601_234316728_234318750_234318944_234320097_234320188_234323007
H1_mix_00002492	chr1	+	1408	3	FSM	ENSG00000152904.11	ENST00000391855.2	1407	3	-1	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	221	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCCAGTTTCTATTAGC	-1	True	NA	58	True	NA	NA	NA	235328569	235343138	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_235328779_235341707_235341779_235342010
H1_mix_00002493	chr1	+	4645	4	NIC	ENSG00000152904.11	novel	2895	4	NA	NA	-28	0	intron_retention	FALSE	canonical	0	0	junction_1	213.685646582908	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTAAGTAGATTTGTTC	392	False	NA	8	True	ATTAAA	-24	NA	235328541	235344532	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_235330501_235335241_235335335_235341707_235341779_235342010
H1_mix_00002495	chr1	+	2727	20	FSM	ENSG00000285053.1	ENST00000643410.1	2725	20	-2	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	90.0418493037475	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAAAGGCTTTGAACCTA	0	True	NA	0	True	NA	NA	NA	235328570	235448944	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_235328779_235335241_235335335_235367101_235367505_235380018_235380150_235401502_235401588_235414432_235414619_235419472_235419562_235427139_235427240_235430704_235430805_235432945_235433172_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
H1_mix_00002498	chr1	+	1796	16	FSM	ENSG00000284770.2	ENST00000643142.1	1779	16	-17	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	52.6204860824713	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAATAATAAAGGCTTTGAA	-19	True	NA	-4	True	NA	NA	NA	235367412	235448940	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_235367505_235380018_235380150_235401502_235401588_235414432_235414619_235427139_235427240_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
H1_mix_00002499	chr1	+	2071	17	FSM	ENSG00000284770.2	ENST00000406207.5	2071	17	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	50.0947539668576	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTAATATCTGTCATAAG	-19	True	NA	NA	False	AATAAA	-10	NA	235367412	235449078	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_235367553_235380018_235380150_235401502_235401588_235414432_235414619_235419472_235419562_235427139_235427240_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
H1_mix_00002500	chr1	+	5371	17	FSM	ENSG00000284770.2	ENST00000642610.2	5374	17	-14	17	0	-17	multi-exon	FALSE	canonical	3	147	junction_4	25.7602376493308	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACAGCATAACTATTATGG	-19	True	NA	NA	False	ATTAAA	-2	NA	235367412	235452426	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_235367505_235380018_235380150_235401502_235401588_235414432_235414619_235419472_235419562_235427139_235427240_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
H1_mix_00002509	chr1	+	10563	33	FSM	ENSG00000116984.15	ENST00000366577.10	10547	33	-16	0	-16	0	multi-exon	FALSE	canonical	3	27	junction_13	11.6084812071821	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGATAGATTGTTGAATTT	-16	True	NA	55	True	ATTAAA	-16	NA	236795275	236903981	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_236795738_236803427_236803643_236806143_236806234_236808703_236808774_236810502_236810596_236812737_236812845_236815603_236815664_236816448_236816544_236824118_236824220_236825337_236825400_236826828_236826897_236829188_236829269_236831965_236832079_236835546_236835688_236838413_236838600_236850343_236850524_236852520_236852638_236852947_236853089_236859832_236859923_236861124_236861278_236862235_236862344_236863453_236863555_236873772_236873841_236874725_236874847_236880754_236880837_236885120_236885220_236886291_236886368_236889180_236889337_236891132_236891330_236894356_236894558_236895357_236895551_236897005_236897119_236897557
H1_mix_00002510	chr1	+	10359	32	FSM	ENSG00000116984.15	ENST00000674797.2	10332	32	-27	0	5	0	multi-exon	TRUE	canonical	3	3	junction_1	14.6383386125649	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGATAGATTGTTGAATTT	-27	True	NA	55	True	ATTAAA	-16	NA	236795264	236903981	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_236795738_236806143_236806234_236808703_236808774_236810502_236810596_236812737_236812845_236815603_236815664_236816448_236816544_236824118_236824220_236825337_236825400_236826828_236826897_236829188_236829269_236831965_236832079_236835546_236835688_236838413_236838600_236850343_236850524_236852520_236852638_236852947_236853089_236859832_236859923_236861124_236861278_236862235_236862344_236863453_236863555_236873772_236873841_236874725_236874847_236880754_236880837_236885120_236885220_236886291_236886368_236889180_236889337_236891132_236891330_236894356_236894558_236895357_236895551_236897005_236897119_236897557
H1_mix_00002511	chr1	+	4751	3	FSM	ENSG00000116984.15	ENST00000470570.2	7293	3	2542	0	2542	0	multi-exon	FALSE	canonical	3	72	junction_1	3	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAAGGTAACTG	NA	False	NA	-26	True	AATAAA	-12	NA	236893764	236900409	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_236895551_236897005_236897119_236897557
H1_mix_00002520	chr1	+	3222	15	NNC	ENSG00000174371.17	novel	3449	16	NA	NA	-38	36	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_10	38.2854477602663	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTATAAGAAGCTAAATA	179	False	NA	57	True	NA	NA	NA	241848165	241889782	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_241848354_241848730_241849028_241850408_241850587_241852291_241852412_241853357_241853482_241857344_241857483_241858505_241858719_241860516_241860705_241861405_241861503_241866829_241867056_241872034_241872279_241878748_241879344_241881915_241882018_241885313_241885508_241889464
H1_mix_00002527	chr1	+	3764	2	NNC	ENSG00000179456.10	novel	3740	2	NA	NA	1839	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTTCTTGTGTGTATTT	748	False	NA	11	True	AATAAA	-13	NA	244053121	244057472	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_244053201_244053787
H1_mix_00002529	chr1	+	4115	4	FSM	ENSG00000121644.19	ENST00000263831.11	859	4	-174	-3082	-174	0	multi-exon	FALSE	canonical	3	25	junction_2	374.65806633071	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTATAGTGCTTTCTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	244652928	244709033	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_244653356_244686596_244686670_244691883_244692021_244705555
H1_mix_00002530	chr1	+	4040	5	FSM	ENSG00000121644.19	ENST00000302550.16	4017	5	-23	0	0	0	multi-exon	FALSE	canonical	3	630	junction_3	84.4345160464605	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTATAGTGCTTTCTTT	-3	True	NA	NA	False	ATTAAA	-19	NA	244653102	244709033	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_244653356_244686596_244686670_244689248_244689343_244691878_244692021_244705555
H1_mix_00002533	chr1	+	2297	4	FSM	ENSG00000203667.10	ENST00000411948.7	2295	4	-2	0	0	0	multi-exon	FALSE	canonical	3	1202	junction_2	147.52476251652	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTATACTGTGTATTTTT	-4	True	NA	9	True	AATAAA	-17	NA	244835655	244845057	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_244835757_244841943_244842059_244842194_244842259_244843040
H1_mix_00002534	chr1	+	2293	4	FSM	ENSG00000203667.10	ENST00000498262.1	2290	4	-3	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	657.901883937787	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTATACTGTGTATTTTT	-4	True	NA	9	True	AATAAA	-17	NA	244835655	244845057	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_244835757_244841943_244842059_244842198_244842259_244843040
H1_mix_00002535	chr1	+	2616	3	FSM	ENSG00000203667.10	ENST00000464757.1	2616	3	0	0	0	0	multi-exon	FALSE	canonical	3	1202	junction_1	170	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATTTTTTTCCCACACTT	4052	False	NA	22	True	AATAAA	-13	NA	244839746	244843280	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_244842059_244842194_244842259_244843040
H1_mix_00002537	chr1	+	1034	7	ISM	ENSG00000203666.13	ENST00000366523.6	1418	8	674	-5	0	5	3prime_fragment	FALSE	canonical	3	103	junction_1	45.4422710700071	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATGAGTGCCAATTACA	-6	True	NA	7	True	AATAAA	-17	NA	244970355	245087842	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_244970444_245017241_245017327_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245087244
H1_mix_00002538	chr1	+	1061	7	NIC	ENSG00000203666.13	novel	860	8	NA	NA	0	5	combination_of_known_junctions	FALSE	canonical	3	15	junction_2	85.657100633216	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATGAGTGCCAATTACA	-6	True	NA	7	True	AATAAA	-17	NA	244970355	245087842	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_244970444_245002120_245002233_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245087244
H1_mix_00002539	chr1	+	1147	8	FSM	ENSG00000203666.13	ENST00000366521.7	860	8	0	-287	0	6	multi-exon	FALSE	canonical	3	37	junction_2	74.3329520139086	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATGAGTGCCAATTACAA	-6	True	NA	8	True	AATAAA	-18	NA	244970355	245087843	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_244970444_245002120_245002233_245017241_245017327_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245087244
H1_mix_00002550	chr1	+	2865	3	FSM	ENSG00000185220.12	ENST00000355360.8	2879	3	14	0	14	0	multi-exon	FALSE	canonical	3	21	junction_2	36	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCACTGCATCCTCTGTCT	NA	False	NA	NA	False	NA	NA	NA	248906209	248919946	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_248906343_248913815_248913880_248917278
H1_mix_00002561	chr1	-	1397	10	FSM	ENSG00000279457.4	ENST00000623083.4	1397	10	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_4	86.0651490241155	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCTCCATGACACCTTCC	4461	False	NA	NA	False	NA	NA	NA	195411	185216	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_185351_185490_185560_186316_186470_187128_187288_187375_187578_187754_187891_188129_188267_188438_188585_188790_188903_195262
H1_mix_00002563	chr1	-	4660	5	Fusion	ENSG00000237094.12_ENSG00000250575.1	novel	728	5	NA	NA	0	446	intron_retention	FALSE	canonical	3	38	junction_2	19.600701518058	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAATGAAAAATATCGCCCA	NA	False	NA	NA	False	NA	NA	NA	498456	490778	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_-_494899_494991_495050_497108_497300_498072_498306_498398
H1_mix_00002574	chr1	-	4152	1	FSM	ENSG00000223764.2	ENST00000609207.1	4152	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGATTACAGAGTCATTCA	4596	False	NA	1	True	AATAAA	-27	NA	921016	916864	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_916900_921000
H1_mix_00002575	chr1	-	1612	5	FSM	ENSG00000188976.11	ENST00000483767.5	1611	5	0	-1	0	0	multi-exon	FALSE	canonical	3	821	junction_1	402.154432401285	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGCTCCTGGAGATTT	6719	False	NA	-14	True	AATAAA	-29	NA	947060	944202	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_944801_945041_945147_945517_945654_946172_946287_946401
H1_mix_00002576	chr1	-	2757	19	FSM	ENSG00000188976.11	ENST00000327044.7	2757	19	0	0	0	0	multi-exon	FALSE	canonical	3	992	junction_1	193.018493644751	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGCTCCTGGAGATTT	3	True	NA	-14	True	AATAAA	-29	NA	959256	944202	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_944801_945056_945147_945517_945654_946172_946287_946401_946546_948130_948233_948489_948604_951126_951239_951999_952140_952411_952601_953174_953289_953781_953893_954003_954083_955922_956014_956094_956216_956893_957026_957098_957274_958928_959082_959214
H1_mix_00002577	chr1	-	865	7	FSM	ENSG00000188976.11	ENST00000487214.1	865	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	589.729434194662	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCACGGTGGGGATGTG	7670	False	NA	NA	False	NA	NA	NA	959309	954425	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_954524_955922_956014_956094_956216_956893_957026_957098_957274_958928_959082_959214
H1_mix_00002579	chr1	-	1053	2	FSM	ENSG00000188290.11	ENST00000481869.1	1038	2	0	-15	0	11	multi-exon	FALSE	canonical	3	94	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTTTCTTTCTTTGTCTT	-1	True	NA	7	True	NA	NA	NA	1000096	998950	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_999433_999525
H1_mix_00002580	chr1	-	898	4	FSM	ENSG00000188290.11	ENST00000304952.11	885	4	0	-13	0	11	multi-exon	FALSE	canonical	3	31	junction_3	26.7374061735406	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTTTCTTTCTTTGTCTT	-2	True	NA	7	True	NA	NA	NA	1000097	998950	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_999433_999525_999614_999691_999788_999865
H1_mix_00002582	chr1	-	788	3	FSM	ENSG00000188290.11	ENST00000484667.2	667	3	-113	-8	2	0	multi-exon	FALSE	canonical	3	18	junction_2	38	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCGTCACGAGTTTTCT	1	True	NA	-4	True	NA	NA	NA	1000094	998961	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_999433_999525_999614_999865
H1_mix_00002583	chr1	-	1848	10	FSM	ENSG00000131591.18	ENST00000421241.7	1832	10	-6	-10	0	5	multi-exon	TRUE	canonical	3	45	junction_9	13.7822573362984	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGCTCTCTCCCGTAGG	0	True	NA	-6	True	TATAAA	-26	NA	1116095	1081812	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1082988_1084352_1084384_1084480_1084507_1085877_1086013_1087138_1087205_1087501_1087598_1090352_1090429_1091471_1091566_1091990_1092104_1116059
H1_mix_00002584	chr1	-	2020	11	FSM	ENSG00000131591.18	ENST00000379325.7	2010	11	0	-10	0	5	multi-exon	FALSE	canonical	3	9	junction_2	26.3901496774838	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGCTCTCTCCCGTAGG	0	True	NA	-6	True	TATAAA	-26	NA	1116095	1081812	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1082988_1083914_1084087_1084352_1084384_1084480_1084507_1085877_1086013_1087138_1087205_1087501_1087598_1090352_1090429_1091471_1091566_1091990_1092104_1116059
H1_mix_00002585	chr1	-	3211	9	NIC	ENSG00000131591.18	novel	2010	11	NA	NA	-8	0	intron_retention	FALSE	canonical	3	45	junction_8	12.3686852575365	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGTTCCGAGCTGCTCT	-8	True	NA	-16	True	TATAAA	-16	NA	1116103	1081822	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_1084384_1084480_1084507_1085877_1086013_1087138_1087205_1087501_1087598_1090352_1090429_1091471_1091566_1091990_1092104_1116059
H1_mix_00002587	chr1	-	1048	5	FSM	ENSG00000186891.14	ENST00000379268.7	1083	5	35	0	14	0	multi-exon	FALSE	canonical	3	9	junction_2	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTGGATGCATGCTGG	19	True	NA	-4	True	AATAAA	-15	NA	1206557	1203507	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1203969_1204033_1204237_1204398_1204487_1205369_1205493_1206384
H1_mix_00002588	chr1	-	3540	3	FSM	ENSG00000078808.19	ENST00000494748.1	3516	3	0	-24	0	1	multi-exon	FALSE	canonical	3	573	junction_1	31	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTTGGGCGTGAAACAAA	7496	False	NA	-1	True	AATATA	-24	NA	1221351	1216907	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1217689_1218457_1218634_1218768
H1_mix_00002589	chr1	-	2033	7	NIC	ENSG00000078808.19	novel	1933	7	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	219.031707496629	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTTGGGCGTGAAACAAA	-11	True	NA	-1	True	AATATA	-24	NA	1232000	1216907	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_1217689_1218457_1218634_1218768_1219006_1223243_1223358_1223831_1223969_1228467_1228947_1231891
H1_mix_00002590	chr1	-	1956	7	FSM	ENSG00000078808.19	ENST00000360001.12	1933	7	0	-23	0	1	multi-exon	FALSE	canonical	3	494	junction_3	43.8231927433662	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTTGGGCGTGAAACAAA	-12	True	NA	-1	True	AATATA	-24	NA	1232001	1216907	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1217689_1218457_1218634_1218768_1218928_1223243_1223358_1223831_1223969_1228467_1228947_1231891
H1_mix_00002591	chr1	-	2138	7	FSM	ENSG00000078808.19	ENST00000660930.1	2137	7	0	-1	0	1	multi-exon	FALSE	canonical	3	16	junction_1	210.325937535055	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTTGGGCGTGAAACAAA	-6	True	NA	-1	True	AATATA	-24	NA	1232067	1216907	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1217805_1218457_1218634_1218768_1218928_1223243_1223358_1223831_1223969_1228467_1228947_1231891
H1_mix_00002593	chr1	-	525	2	FSM	ENSG00000184163.3	ENST00000478606.1	522	2	0	-3	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCGAGTGCTGCCTGGAT	3565	False	NA	-6	True	AATAAA	-23	NA	1243158	1242445	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1242647_1242834
H1_mix_00002594	chr1	-	1043	8	FSM	ENSG00000184163.3	ENST00000330388.2	1036	8	0	-7	0	0	multi-exon	FALSE	canonical	3	23	junction_2	3.33197251134017	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCGAGTGCTGCCTGGAT	1	False	NA	-6	True	AATAAA	-23	NA	1246722	1242445	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1242647_1242834_1242914_1243061_1243153_1243443_1243553_1243953_1244106_1244190_1244276_1244380_1244498_1246513
H1_mix_00002595	chr1	-	2265	7	FSM	ENSG00000160087.21	ENST00000349431.11	2260	7	0	-5	0	2	multi-exon	FALSE	canonical	3	448	junction_5	57.3626378596925	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTTGTGTCTGTGTGG	-10	True	NA	-1	True	AAAAAG	-33	NA	1273854	1253906	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1255488_1256044_1256126_1256991_1257131_1257207_1257311_1263345_1263387_1267861_1267993_1273665
H1_mix_00002597	chr1	-	1035	8	FSM	ENSG00000160087.21	ENST00000400930.8	1021	8	0	-14	0	0	multi-exon	FALSE	canonical	3	7	junction_5	249.344282927384	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCACCAGAGCGTGACCTC	11	True	NA	NA	False	NA	NA	NA	1273833	1255163	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1255488_1256044_1256126_1256991_1257131_1257207_1257311_1263345_1263387_1264782_1264831_1267861_1267993_1273665
H1_mix_00002599	chr1	-	5328	22	FSM	ENSG00000131584.19	ENST00000492936.5	5319	22	0	-9	0	9	multi-exon	FALSE	canonical	2	5	junction_4	30.3824451043945	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGCTCCCGTGCCTTGCT	2106	False	NA	-29	True	AATAAA	-24	NA	1305929	1292380	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1293709_1293822_1293934_1294089_1294200_1294401_1294629_1295446_1295555_1295735_1295939_1296014_1296110_1296210_1296281_1296424_1296634_1297821_1297934_1298012_1298114_1298369_1298422_1298566_1298680_1299344_1299357_1299830_1299906_1299972_1300069_1300157_1300203_1300508_1300693_1301987_1302047_1302921_1302976_1303161_1303282_1304085
H1_mix_00002600	chr1	-	3809	24	FSM	ENSG00000131584.19	ENST00000354700.10	3793	24	0	-16	0	15	multi-exon	TRUE	canonical	3	99	junction_14	17.1892611659982	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCGTGCCTTGCTCTGCTC	105	False	1307947	-23	True	AATAAA	-30	NA	1307930	1292374	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1293709_1293822_1293934_1294089_1294200_1294401_1294629_1294717_1294817_1295446_1295555_1295735_1295939_1296014_1296110_1296210_1296281_1296424_1296634_1297821_1297934_1298012_1298114_1298369_1298422_1298566_1298680_1299344_1299357_1299830_1299906_1299972_1300069_1300157_1300203_1300508_1300693_1301987_1302047_1302921_1302976_1303161_1303282_1304085_1304144_1307768
H1_mix_00002606	chr1	-	2129	17	FSM	ENSG00000127054.22	ENST00000435064.6	2114	17	0	-15	0	0	multi-exon	FALSE	canonical	3	349	junction_8	42.5069387718052	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGTGTACATGGCTGT	-3	True	NA	0	True	AGTAAA	-30	NA	1324660	1311584	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1311925_1312017_1312148_1312225_1312369_1312439_1312502_1312592_1312701_1312786_1312950_1313034_1313125_1313508_1313593_1313731_1313922_1314300_1314366_1314823_1314963_1315403_1315439_1315519_1315619_1319295_1319525_1320455_1320530_1320995_1321094_1324580
H1_mix_00002608	chr1	-	1548	14	FSM	ENSG00000127054.22	ENST00000528879.5	1524	14	0	-24	0	0	multi-exon	FALSE	canonical	3	27	junction_7	121.007066153889	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGGCATTGCGCGTCTAC	9	True	NA	NA	False	NA	NA	NA	1324648	1312259	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1312369_1312439_1312502_1312592_1312701_1312786_1312950_1313034_1313125_1313508_1313593_1313731_1313922_1314823_1314963_1315403_1315439_1315519_1315619_1319295_1319525_1320455_1320530_1320995_1321094_1324580
H1_mix_00002610	chr1	-	2446	2	FSM	ENSG00000240731.1_ENSG00000127054.22	ENST00000496353.1	2428	2	0	-18	0	0	multi-exon	FALSE	canonical	3	515	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTGAAACTTTAATTTT	46	False	NA	-14	True	AATGAA	-17	NA	1324611	1318678	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1321094_1324580
H1_mix_00002611	chr1	-	1104	4	FSM	ENSG00000127054.22	ENST00000429572.5	1104	4	0	0	0	0	multi-exon	FALSE	canonical	3	473	junction_2	17.7826382244655	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTGAAACTTTAATTTT	-9	True	NA	-14	True	AATGAA	-17	NA	1324666	1318678	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1319525_1320455_1320530_1320995_1321094_1324580
H1_mix_00002613	chr1	-	773	4	FSM	ENSG00000127054.22	ENST00000532952.5	773	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	232.563969694362	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACTGCATGAAGAAGGT	15	True	NA	NA	False	NA	NA	NA	1324642	1319346	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1319886_1320455_1320530_1320995_1321094_1324580
H1_mix_00002614	chr1	-	2928	15	FSM	ENSG00000107404.21	ENST00000378891.9	2926	15	0	-2	0	2	multi-exon	TRUE	canonical	3	87	junction_4	32.9576103750356	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGCCTGTGCCCCTTC	9434	False	NA	1	True	AAAAAG	-22	NA	1349112	1335273	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1336516_1337976_1338184_1338268_1338437_1338521_1338654_1339361_1339440_1339581_1339650_1339735_1339813_1340037_1340178_1340246_1340317_1340409_1340504_1341666_1341806_1342052_1342157_1342362_1342485_1342688_1342759_1348895
H1_mix_00002615	chr1	-	3309	15	FSM	ENSG00000107404.21	ENST00000378888.10	3305	15	0	-4	0	2	multi-exon	FALSE	canonical	3	128	junction_1	24.9727402401507	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGCCTGTGCCCCTTC	-20	True	NA	1	True	AAAAAG	-22	NA	1349418	1335273	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1336516_1337976_1338184_1338268_1338437_1338521_1338654_1339286_1339440_1339581_1339650_1339735_1339813_1340037_1340178_1340246_1340317_1340409_1340504_1341666_1341806_1342052_1342157_1342362_1342485_1342688_1342759_1348895
H1_mix_00002619	chr1	-	1170	4	FSM	ENSG00000162576.17	ENST00000474033.5	1171	4	0	1	0	-1	multi-exon	FALSE	canonical	3	101	junction_2	19.3620476419435	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTCCCAGGTATGCTTC	7533	False	NA	-12	True	AATAAA	-20	NA	1354264	1352689	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1353630_1353847_1353929_1354029_1354107_1354192
H1_mix_00002620	chr1	-	2294	10	FSM	ENSG00000162576.17	ENST00000309212.11	2293	10	0	-1	0	-1	multi-exon	FALSE	canonical	3	97	junction_8	13.8483853852273	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTCCCAGGTATGCTTC	-9	True	NA	-12	True	AATAAA	-20	NA	1358555	1352689	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1353630_1353847_1353929_1354029_1354107_1354192_1354233_1354353_1354510_1354681_1355153_1355243_1355346_1355449_1355753_1356680_1356705_1358455
H1_mix_00002622	chr1	-	1001	5	FSM	ENSG00000162576.17	ENST00000476718.1	1001	5	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_2	16.768646337734	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCTTGGTGGCAGCATAG	6781	False	NA	NA	False	NA	NA	NA	1355016	1353438	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1353630_1353847_1353929_1354029_1354107_1354192_1354510_1354681
H1_mix_00002624	chr1	-	339	2	FSM	ENSG00000162576.17	ENST00000460473.1	339	2	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACCTGCGTGAACCGCG	6285	False	NA	NA	False	NA	NA	NA	1355512	1355082	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1355153_1355243
H1_mix_00002625	chr1	-	1109	5	NNC	ENSG00000175756.14	novel	753	4	NA	NA	-319	5556	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1491.79774098234	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGTTGTGCCCACCTAT	-11	True	NA	NA	False	AAAAAG	-5	NA	1375526	1368173	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_1368211_1373735_1373903_1373999_1374446_1374704_1374791_1375153
H1_mix_00002626	chr1	-	1092	3	FSM	ENSG00000175756.14	ENST00000338370.7	1072	3	0	-20	0	20	multi-exon	FALSE	canonical	3	3505	junction_2	92	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCGGGTGTGAGGTCTC	29	True	NA	-3	True	AATAAA	-42	NA	1375157	1373709	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1373903_1373999_1374446_1374704
H1_mix_00002628	chr1	-	1067	4	FSM	ENSG00000175756.14	ENST00000338338.10	753	4	-288	-26	-288	20	multi-exon	FALSE	canonical	3	1810	junction_3	845.742408906058	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCGGGTGTGAGGTCTC	20	True	NA	-3	True	AATAAA	-42	NA	1375495	1373709	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1373903_1373999_1374446_1374704_1374791_1375153
H1_mix_00002629	chr1	-	1238	4	FSM	ENSG00000175756.14	ENST00000378853.3	875	4	-336	-27	-302	20	multi-exon	FALSE	canonical	3	576	junction_3	1426.0927973546	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCGGGTGTGAGGTCTC	6	True	NA	-3	True	AATAAA	-42	NA	1375509	1373709	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1373903_1373999_1374446_1374704_1374791_1374996
H1_mix_00002631	chr1	-	2794	8	FSM	ENSG00000221978.13	ENST00000480479.5	2792	8	0	-2	0	2	multi-exon	FALSE	canonical	3	13	junction_4	639.030675383923	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTTCTCCTAATTTG	8227	False	NA	-13	True	CATAAA	-19	NA	1391096	1385708	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1387583_1387776_1387870_1387953_1388066_1388491_1388511_1388625_1388744_1390229_1390372_1390458_1390564_1390765
H1_mix_00002632	chr1	-	3114	11	FSM	ENSG00000221978.13	ENST00000400809.8	3112	11	0	-2	0	2	multi-exon	FALSE	canonical	3	373	junction_6	293.571132777049	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTTCTCCTAATTTG	-12	True	NA	-13	True	CATAAA	-19	NA	1399335	1385708	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1387583_1387776_1387870_1387953_1388066_1390229_1390372_1390458_1390564_1390765_1390866_1393395_1393461_1395393_1395515_1398232_1398343_1398596_1398672_1399018
H1_mix_00002633	chr1	-	5002	11	NIC	ENSG00000221978.13	novel	2815	12	NA	NA	1	-21	intron_retention	FALSE	canonical	3	903	junction_6	151.26404067061	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGAACCATTTAAGGCC	15	True	NA	-36	True	ACTAAA	-24	NA	1399308	1385731	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_1387583_1387776_1387870_1387953_1388066_1390229_1390372_1390458_1390564_1390765_1392804_1393395_1393461_1395393_1395515_1398232_1398343_1398596_1398672_1399018
H1_mix_00002634	chr1	-	1954	3	FSM	ENSG00000221978.13	ENST00000463260.5	1941	3	0	-13	0	0	multi-exon	FALSE	canonical	3	1321	junction_1	46	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGACGTGGTAGGTGGTCG	2373	False	NA	-12	True	AATAAA	-35	NA	1388713	1386481	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1387583_1387776_1387870_1387953
H1_mix_00002635	chr1	-	2405	12	NIC	ENSG00000221978.13	novel	1598	12	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_6	375.688216961401	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGGACATCCGGAGCGTT	8532	False	NA	-32	True	AATAAA	-15	NA	1399294	1386501	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_1387583_1387776_1387870_1387953_1388066_1390229_1390372_1390458_1390564_1390765_1390866_1392678_1392804_1393395_1393461_1395393_1395515_1398232_1398343_1398596_1398672_1399018
H1_mix_00002636	chr1	-	4641	6	FSM	ENSG00000221978.13	ENST00000418865.6	3082	6	-2251	692	-2060	138	multi-exon	FALSE	canonical	3	1209	junction_5	64.8740317846825	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGAGTTCTTCCCGTTCTCG	7465	False	NA	NA	False	NA	NA	NA	1394776	1387404	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1387583_1387776_1387870_1387953_1388066_1390229_1390372_1390458_1390564_1390765
H1_mix_00002637	chr1	-	2815	12	FSM	ENSG00000221978.13	ENST00000481223.6	2815	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	385.26498340495	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCTATGTATGAAAACTC	12	True	NA	-42	True	AATAAA	-20	NA	1399311	1386707	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1387583_1387776_1387870_1387953_1388066_1390229_1390372_1390458_1390564_1390765_1391576_1392789_1392804_1393395_1393461_1395393_1395515_1398232_1398343_1398596_1398672_1399018
H1_mix_00002643	chr1	-	1186	6	FSM	ENSG00000221978.13	ENST00000408918.8	1186	6	0	0	0	0	multi-exon	FALSE	canonical	3	903	junction_1	190.28189614359	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAAGATTTCATTTGTTT	6	True	NA	-41	True	AATACA	-18	NA	1399317	1392287	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1392804_1393395_1393461_1395393_1395515_1398232_1398343_1398596_1398672_1399018
H1_mix_00002647	chr1	-	700	4	FSM	ENSG00000242485.6	ENST00000344843.12	700	4	0	0	0	0	multi-exon	FALSE	canonical	3	1624	junction_1	33.1762967593833	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTAGAGTCATTTTCTG	-19	True	NA	-12	True	AATGAA	-17	NA	1407293	1401908	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1402257_1405808_1405887_1406908_1407020_1407130
H1_mix_00002648	chr1	-	1377	2	ISM	ENSG00000235098.9	ENST00000537107.6	2024	4	1147	-169	962	169	3prime_fragment	FALSE	canonical	3	20	junction_1	0	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCGCTCCCGGGTAGGA	2	True	NA	NA	False	NA	NA	NA	1420129	1418250	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_1419550_1420051
H1_mix_00002649	chr1	-	1975	3	FSM	ENSG00000235098.9	ENST00000427211.3	1976	3	0	1	0	-1	multi-exon	FALSE	canonical	2	4	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGGTGTCTGAGAGGTTT	606	False	NA	-2	True	AATAAA	-16	NA	1421769	1418420	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1419550_1420796_1421006_1421132
H1_mix_00002650	chr1	-	1048	2	FSM	ENSG00000205090.9	ENST00000624426.1	796	2	-255	3	19	-3	multi-exon	FALSE	canonical	3	19	junction_1	0	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACGCGCATGTGTGTGGCG	7	True	NA	-8	True	AATAAA	-13	NA	1540605	1539058	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1539791_1540289
H1_mix_00002652	chr1	-	619	3	FSM	ENSG00000160075.12	ENST00000378725.3	619	3	0	0	0	0	multi-exon	FALSE	canonical	3	1735	junction_1	9.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTTTGTTTTGTTTTT	-5	True	NA	NA	False	NA	NA	NA	1574587	1544637	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1545003_1564772_1564917_1574477
H1_mix_00002653	chr1	-	4176	2	FSM	ENSG00000160075.12	ENST00000359060.5	4176	2	0	0	0	0	multi-exon	FALSE	canonical	3	1754	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTAATTTATTATTATTA	-2	True	NA	-5	True	AATAAA	-31	NA	1574584	1560847	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1564917_1574477
H1_mix_00002655	chr1	-	2033	1	FSM	ENSG00000272106.1	ENST00000607222.1	2038	1	-2	7	-2	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCAACTGTTTTTTGTTT	-12	True	NA	-8	True	AATAAA	-13	NA	1615797	1613764	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1613800_1615800
H1_mix_00002656	chr1	-	2998	20	FSM	ENSG00000248333.9	ENST00000341832.11	2992	20	0	-6	0	6	multi-exon	TRUE	canonical	3	78	junction_16	41.8596785341289	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCGTCCTTTGAGTGACC	-17	True	NA	NA	False	ATTAAA	-24	NA	1659004	1635218	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1635857_1635936_1636127_1636332_1636482_1636681_1636799_1636896_1637005_1637080_1637203_1637407_1637514_1637761_1637884_1638499_1638591_1640276_1640453_1641047_1641114_1641661_1641821_1641905_1642002_1642385_1642509_1645125_1645263_1649498_1649638_1652438_1652567_1655368_1655485_1657374_1657499_1658913
H1_mix_00002658	chr1	-	2847	20	NNC	ENSG00000248333.9	novel	2677	20	NA	NA	-182	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_15	49.6178191564214	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTGTTTTCTCCGTGA	-3	True	NA	NA	False	ATTAAA	-25	NA	1659194	1635586	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_1635857_1635936_1636127_1636332_1636482_1636681_1636799_1636896_1637005_1637080_1637203_1637407_1637514_1637761_1637884_1638499_1638591_1640276_1640453_1641047_1641114_1641661_1641821_1641905_1642002_1642385_1642509_1645125_1645290_1649498_1649638_1652438_1652567_1655368_1655485_1657374_1657499_1658913
H1_mix_00002659	chr1	-	2867	21	FSM	ENSG00000248333.9	ENST00000340677.9	2534	21	-182	-151	-182	0	multi-exon	FALSE	canonical	3	22	junction_19	51.8785842135269	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTGTTTTCTCCGTGA	-3	True	NA	NA	False	ATTAAA	-25	NA	1659194	1635586	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1635857_1635936_1636127_1636332_1636482_1636681_1636799_1636896_1637005_1637080_1637203_1637407_1637514_1637761_1637884_1638499_1638591_1640276_1640453_1641047_1641114_1641661_1641821_1641905_1642002_1642385_1642509_1645125_1645263_1649498_1649638_1652438_1652567_1655368_1655485_1657255_1657303_1657374_1657499_1658913
H1_mix_00002662	chr1	-	5949	9	FSM	ENSG00000189339.12	ENST00000611123.1	5948	9	0	-1	0	0	multi-exon	FALSE	canonical	3	114	junction_6	20.1645573965808	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTGTTTTCTTCCTTG	93	False	NA	-1	True	AATAAA	-14	NA	1692728	1661477	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1666020_1668326_1668473_1669663_1669737_1670097_1670152_1671508_1671630_1675462_1675591_1676063_1676200_1676377_1676847_1692448
H1_mix_00002664	chr1	-	958	1	Intergenic	novelGene_1	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGGTTAATAACAGCTTT	NA	False	NA	NA	False	AATAAA	-20	NA	1699579	1698621	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_-_1698600_1699600
H1_mix_00002665	chr1	-	2984	20	FSM	ENSG00000008128.23	ENST00000404249.8	2984	20	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_16	48.6679062314469	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGTCGTCCTTTGAGTG	-33	True	NA	NA	False	ATTAAA	-21	NA	1724357	1702378	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1703000_1703079_1703270_1703475_1703625_1703823_1703941_1704038_1704147_1704222_1704345_1704549_1704656_1704903_1705026_1705641_1705733_1707408_1707585_1708179_1708246_1708793_1708953_1709037_1709134_1709517_1709641_1712263_1712401_1716345_1716479_1719327_1719456_1721595_1721712_1722707_1722832_1724257
H1_mix_00002667	chr1	-	1028	5	FSM	ENSG00000008128.23	ENST00000463652.5	1028	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	65.2859096589762	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGAATTAAATCATTTTC	NA	False	NA	NA	False	NA	NA	NA	1704253	1702765	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1703000_1703079_1703270_1703475_1703941_1704038_1704147_1704222
H1_mix_00002671	chr1	-	2089	7	FSM	ENSG00000215790.8	ENST00000647043.1	2078	7	0	-11	0	11	multi-exon	TRUE	canonical	3	20	junction_1	66.6418703885845	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTTTCTGAGTAAGGT	151	False	NA	NA	False	AATAAA	-33	NA	1745919	1724826	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1725423_1734689_1734836_1738320_1738449_1738921_1739058_1739235_1739705_1744250_1744669_1745723
H1_mix_00002674	chr1	-	3237	12	FSM	ENSG00000008130.15	ENST00000341426.9	3235	12	0	-2	0	2	multi-exon	FALSE	canonical	0	0	junction_8	134.989623108991	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTTAATAACAGCTTTCT	-30	True	NA	NA	False	AATAAA	-22	NA	1778470	1751229	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1753061_1753566_1753650_1754050_1754209_1754283_1754384_1754543_1754699_1755373_1755477_1756257_1756344_1756502_1756609_1757180_1757311_1761951_1762036_1765227_1765447_1778288
H1_mix_00002675	chr1	-	3100	12	FSM	ENSG00000008130.15	ENST00000341991.7	3098	12	0	-2	0	2	multi-exon	FALSE	canonical	0	0	junction_8	169.055177065247	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTTAATAACAGCTTTCT	8627	False	NA	NA	False	AATAAA	-22	NA	1778790	1751229	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1753061_1753566_1753650_1754050_1754209_1754283_1754384_1754543_1754699_1755373_1755477_1756257_1756344_1756502_1756609_1757180_1757311_1761951_1762036_1765227_1765447_1778745
H1_mix_00002679	chr1	-	3161	12	FSM	ENSG00000078369.18	ENST00000378609.9	3163	12	0	2	0	-2	multi-exon	FALSE	canonical	3	1627	junction_11	327.328025631226	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTGGTGTGGTGATTAT	7	True	NA	-6	True	AATAAA	-17	NA	1891087	1785287	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1787054_1787321_1787438_1789052_1789270_1790394_1790597_1793244_1793312_1804418_1804582_1806474_1806539_1815755_1815863_1817836_1817876_1825396_1825500_1839189_1839239_1890819
H1_mix_00002680	chr1	-	3142	11	FSM	ENSG00000078369.18	ENST00000610897.4	3145	11	0	3	0	-2	multi-exon	FALSE	canonical	3	386	junction_10	664.31655857731	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTGGTGTGGTGATTAT	-23	True	NA	-6	True	AATAAA	-17	NA	1891117	1785287	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1787054_1787321_1787438_1789052_1789270_1790394_1790597_1793244_1793312_1804418_1804582_1806474_1806539_1815755_1815863_1817836_1817876_1825396_1825500_1890819
H1_mix_00002681	chr1	-	2438	3	FSM	ENSG00000078369.18	ENST00000461893.5	2438	3	0	0	0	0	multi-exon	FALSE	canonical	3	2273	junction_1	185.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGATCTTGGCTCACTGCA	9783	False	NA	NA	False	NA	NA	NA	1794197	1787986	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1789270_1790394_1790597_1793244
H1_mix_00002683	chr1	-	705	3	FSM	ENSG00000078369.18	ENST00000472614.2	708	3	0	3	0	-3	multi-exon	FALSE	canonical	3	1627	junction_2	211	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATATCTGATGTATTTTTT	789	False	NA	NA	False	AATAAA	-14	NA	1890966	1824990	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1825500_1839189_1839239_1890819
H1_mix_00002686	chr1	-	1510	3	ISM	ENSG00000178821.13	ENST00000602604.1	878	4	-30	-509	-20	0	intron_retention	FALSE	canonical	3	20	junction_2	28.5	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGCCTATGTGGGAAGGA	NA	False	NA	-8	True	AATAAA	-18	NA	1919299	1917589	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_1918163_1918252_1918935_1919044
H1_mix_00002688	chr1	-	4478	2	FSM	ENSG00000162585.17	ENST00000497675.2	4478	2	0	0	0	0	multi-exon	FALSE	canonical	3	1193	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGCTTTTCTTTCTGACG	954	False	NA	-10	True	ATTAAA	-44	NA	2194108	2189543	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_2193911_2193997
H1_mix_00002689	chr1	-	573	3	FSM	ENSG00000162585.17	ENST00000378543.2	569	3	0	-4	0	0	multi-exon	FALSE	canonical	3	123	junction_2	643	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGCTTTTCTTTCTGACG	-7	True	NA	-10	True	ATTAAA	-44	NA	2194750	2189543	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_2189782_2193638_2193911_2194687
H1_mix_00002690	chr1	-	731	4	FSM	ENSG00000162585.17	ENST00000378546.9	727	4	0	-4	0	0	multi-exon	FALSE	canonical	3	1055	junction_3	145.684590811794	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGCTTTTCTTTCTGACG	-6	True	NA	-10	True	ATTAAA	-44	NA	2194772	2189543	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_2189782_2193638_2193911_2193997_2194134_2194687
H1_mix_00002691	chr1	-	1544	4	FSM	ENSG00000162585.17	ENST00000420515.1	1544	4	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	481.312788111847	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGACATTTTGTGCATTT	-5	True	NA	0	True	NA	NA	NA	2194748	2191900	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_2192976_2193638_2193911_2193997_2194134_2194687
H1_mix_00002693	chr1	-	1500	11	FSM	ENSG00000116151.14	ENST00000378529.7	1500	11	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	8.34326075344646	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCATGCCTTCTACTTGGA	4	True	NA	NA	False	CATAAA	-14	NA	2391707	2355174	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_2355465_2357431_2357599_2358591_2358716_2372480_2372592_2374460_2374558_2384977_2385066_2385806_2385898_2387418_2387530_2388238_2388338_2389924_2389997_2391457
H1_mix_00002694	chr1	-	4642	5	FSM	ENSG00000116151.14	ENST00000449373.2	4764	5	0	122	0	-122	multi-exon	FALSE	canonical	2	3	junction_1	13.3790881602597	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGCAGGGCACCTTAATC	3374	False	NA	NA	False	TATAAA	-16	NA	2388337	2374974	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_2379228_2384977_2385066_2385806_2385898_2387418_2387530_2388238
H1_mix_00002697	chr1	-	2835	6	FSM	ENSG00000157911.11	ENST00000447513.7	2835	6	0	0	0	0	multi-exon	TRUE	canonical	3	270	junction_3	11.443775600736	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGTAAAACGTTGAGAGT	-19	True	NA	-10	True	AGTAAA	-17	NA	2412564	2403973	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_2405835_2406483_2406620_2406719_2406896_2408451_2408859_2410370_2410452_2412390
H1_mix_00002699	chr1	-	736	2	FSM	ENSG00000157881.16	ENST00000487804.1	718	2	0	-18	0	18	multi-exon	FALSE	canonical	3	168	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGGGCCTCCCCAGGCG	NA	False	NA	NA	False	NA	NA	NA	2514085	2512387	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_2513040_2514001
H1_mix_00002700	chr1	-	568	2	FSM	ENSG00000157881.16	ENST00000514922.1	568	2	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGCGCGGTGTCCCACA	5	True	NA	NA	False	NA	NA	NA	2526597	2521366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_2521801_2526463
H1_mix_00002701	chr1	-	8300	30	NIC	ENSG00000162591.16	novel	7443	37	NA	NA	33	7	intron_retention	FALSE	canonical	2	5	junction_29	39.0146470864091	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACTAAATAGTATTTTTA	-4	True	NA	NA	False	ATTAAA	-36	NA	3531415	3487943	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_3490590_3490911_3490960_3492638_3492768_3493770_3493900_3493995_3494125_3494370_3494500_3494612_3494742_3495889_3496019_3496654_3496784_3497232_3498500_3498697_3498827_3499587_3499717_3499795_3499925_3500632_3500765_3500965_3501095_3501176_3501922_3505207_3505343_3505421_3505557_3506107_3506237_3507794_3507924_3508557_3508690_3509074_3509246_3509869_3509993_3510782_3510903_3511549_3511688_3512005_3512129_3514549_3514673_3515401_3515528_3524123_3524247_3531079
H1_mix_00002702	chr1	-	7467	37	FSM	ENSG00000162591.16	ENST00000356575.9	7443	37	0	-24	0	24	multi-exon	FALSE	canonical	3	21	junction_28	36.0342237016115	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACTATAAAAGACATGCTT	-17	True	NA	NA	False	ATTAAA	-41	NA	3611508	3487926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_3490590_3490911_3490960_3492638_3492768_3493770_3493900_3493995_3494125_3494370_3494500_3494612_3494742_3495889_3496019_3496654_3496784_3496987_3497120_3497232_3497362_3498370_3498500_3498697_3498827_3499137_3499267_3499587_3499717_3499795_3499925_3500632_3500765_3500965_3501095_3501176_3501309_3501795_3501922_3505207_3505343_3505421_3505557_3506107_3506237_3507794_3507924_3508557_3508690_3509074_3509246_3509869_3509993_3510782_3510903_3511549_3511688_3512005_3512129_3514549_3514673_3515401_3515528_3524123_3524247_3579824_3579930_3595337_3595448_3602465_3602601_3611137
H1_mix_00002707	chr1	-	743	4	NNC	ENSG00000162591.16	novel	7443	37	NA	NA	18	-97055	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	16.3095064303001	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGCCCTAAAATGTGTTG	1	True	NA	NA	False	AATAAA	-27	NA	3611490	3589782	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_3589928_3595337_3595448_3602465_3602601_3611137
H1_mix_00002708	chr1	-	2002	11	FSM	ENSG00000116213.16	ENST00000378322.7	1998	11	0	-4	0	4	multi-exon	FALSE	canonical	3	184	junction_2	15.1208465371486	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTTGAAACGTTTAGTC	9111	False	NA	4	True	AATAAA	-27	NA	3650058	3630762	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_3631658_3632212_3632339_3633397_3633504_3634996_3635075_3635159_3635295_3635943_3636031_3636994_3637099_3638749_3638823_3646665_3646783_3647407_3647561_3649930
H1_mix_00002709	chr1	-	1699	12	FSM	ENSG00000116213.16	ENST00000270708.12	1692	12	0	-7	0	4	multi-exon	FALSE	canonical	3	181	junction_1	17.1955212312167	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTTGAAACGTTTAGTC	-14	True	NA	4	True	AATAAA	-27	NA	3650103	3630762	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_3631118_3631465_3631658_3632212_3632339_3633397_3633504_3634996_3635075_3635159_3635295_3635943_3636031_3636994_3637099_3638749_3638823_3646665_3646783_3647407_3647561_3649930
H1_mix_00002710	chr1	-	1628	12	NNC	ENSG00000116213.16	novel	1692	12	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	60.3366588128164	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTACTTCTCTTCTTGAA	9106	False	NA	-6	True	AATAAA	-17	NA	3650063	3630772	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_3631118_3631465_3631658_3632212_3632318_3633397_3633504_3634996_3635075_3635159_3635295_3635943_3636031_3636994_3637099_3638749_3638823_3646665_3646783_3647407_3647561_3649930
H1_mix_00002715	chr1	-	988	1	FSM	ENSG00000227372.12	ENST00000624167.1	988	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAATTTGCATTTTCTCC	NA	False	NA	-4	True	TATAAA	-29	NA	3736588	3735600	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_3735600_3736600
H1_mix_00002716	chr1	-	6358	4	FSM	ENSG00000227372.12	ENST00000452079.5	6358	4	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	42.7109145561439	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGGAGTGGATGTTTGTG	-1	True	NA	-3	True	ATTAAA	-17	NA	3747322	3735983	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_3740388_3742803_3742912_3743060_3743191_3745606
H1_mix_00002718	chr1	-	3849	5	FSM	ENSG00000227372.12	ENST00000647831.1	3831	5	0	-18	0	0	multi-exon	FALSE	canonical	3	30	junction_1	63.1466547015754	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAAACAAAAATCCCCAC	29	False	NA	NA	False	NA	NA	NA	3747336	3736174	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_3737855_3740232_3740388_3742803_3742958_3743060_3743191_3745606
H1_mix_00002719	chr1	-	3917	6	NIC	ENSG00000227372.12	novel	3525	5	NA	NA	0	18	intron_retention	FALSE	canonical	3	11	junction_1	59.672439199349	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTTGGCCCGCAGGTCCT	-8	True	NA	NA	False	NA	NA	NA	3747373	3736389	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_3736559_3736925_3738514_3740232_3740388_3742803_3742912_3743060_3743191_3745606
H1_mix_00002720	chr1	-	3531	5	FSM	ENSG00000227372.12	ENST00000423764.6	3525	5	0	-6	0	0	multi-exon	FALSE	canonical	3	77	junction_3	37.2583883172635	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGAAAGCACTCACATTT	-8	True	NA	-16	True	TTTAAA	-25	NA	3747373	3737142	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_3738514_3740232_3740388_3742803_3742912_3743060_3743191_3745606
H1_mix_00002721	chr1	-	3697	5	NIC	ENSG00000227372.12	novel	3525	5	NA	NA	3	0	intron_retention	FALSE	canonical	2	4	junction_4	61.7515181999601	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGCTGAAAGCACTC	2	True	NA	-22	True	TTTAAA	-19	NA	3747319	3737148	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_3738514_3740232_3740388_3742803_3742912_3743060_3743191_3745380
H1_mix_00002723	chr1	-	2313	5	FSM	ENSG00000227372.12	ENST00000650039.1	2307	5	0	-6	0	0	multi-exon	FALSE	canonical	3	30	junction_1	59.3990740668573	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCACGCTATACTTAAAAA	488	False	NA	-79	True	NA	NA	NA	3746877	3737205	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_3737855_3740232_3740388_3742803_3742912_3743060_3743191_3745606
H1_mix_00002724	chr1	-	3460	5	ISM	ENSG00000227372.12	ENST00000636630.1	2529	6	-299	-382	0	0	intron_retention	FALSE	canonical	3	50	junction_3	48.0052080507938	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTCTCACGCTATACT	-1	True	NA	-85	True	NA	NA	NA	3747322	3737211	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_3738514_3740232_3740388_3742803_3742961_3743060_3743191_3745606
H1_mix_00002725	chr1	-	3088	5	FSM	ENSG00000227372.12	ENST00000648600.1	3088	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	45.9802946924006	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGAAAGCACTCACATTT	481	False	NA	-16	True	TTTAAA	-25	NA	3746884	3737142	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_3738514_3740232_3740388_3742803_3742958_3743060_3743191_3745606
H1_mix_00002728	chr1	-	4303	7	FSM	ENSG00000130764.10	ENST00000378251.3	4303	7	0	0	0	0	multi-exon	FALSE	canonical	3	527	junction_1	21.9063664008637	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGCAGATCCTTTCCCA	-1	True	NA	71	True	AATAAA	-17	NA	3796498	3778558	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_3781337_3781511_3781602_3782660_3782764_3783995_3784112_3785086_3785204_3786848_3787311_3795861
H1_mix_00002729	chr1	-	6502	22	FSM	ENSG00000116198.14	ENST00000378230.8	6431	22	17	-88	0	88	multi-exon	FALSE	canonical	3	69	junction_7	10.3883765501131	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAACCTTAGAAAGTAGAT	12	True	NA	NA	False	AATAAA	-22	NA	3857194	3811997	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_3815518_3816279_3816371_3823173_3823242_3823423_3823563_3825757_3825867_3826369_3826437_3826707_3826745_3829265_3829374_3829790_3829998_3831045_3831223_3833861_3834036_3834924_3835093_3836494_3836693_3837291_3837520_3838963_3839120_3839607_3839777_3844906_3844984_3845288_3845352_3847474_3847614_3848607_3848782_3852294_3852422_3856888
H1_mix_00002732	chr1	-	1133	7	NNC	ENSG00000116198.14	novel	1661	4	NA	NA	0	1284	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	33.0525675586969	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTGTTATTTTGATTTA	8	True	NA	NA	False	AATAAA	-5	NA	3857198	3841824	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_3842068_3844906_3844984_3845288_3845352_3847474_3847614_3848607_3848782_3852294_3852422_3856888
H1_mix_00002735	chr1	-	3494	3	FSM	ENSG00000198912.12	ENST00000474140.1	3499	3	6	-1	6	1	multi-exon	FALSE	canonical	3	298	junction_2	3.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTCGTATGTTCGTAAAAC	-27	True	NA	-1	True	AATAAA	-26	NA	3900287	3889123	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_3890074_3890568_3892997_3900171
H1_mix_00002738	chr1	-	2061	4	FSM	ENSG00000116251.11	ENST00000234875.9	2061	4	0	0	0	0	multi-exon	FALSE	canonical	3	3836	junction_3	966.168492321891	2076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGCTTTGTTTTTTTTAA	10	True	NA	-2	True	ATTAAA	-30	NA	6199595	6185019	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_6186817_6192929_6193055_6197651_6197757_6199561
H1_mix_00002739	chr1	-	2279	3	FSM	ENSG00000116251.11	ENST00000480661.1	2279	3	0	0	0	0	multi-exon	FALSE	canonical	3	5877	junction_1	8.5	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATTGGAAATCATAGTC	9830	False	NA	NA	False	NA	NA	NA	6199563	6186574	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_6186817_6192929_6193055_6197651
H1_mix_00002740	chr1	-	786	4	FSM	ENSG00000116251.11	ENST00000497965.5	786	4	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_3	2702.80673046043	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGTTTATCCTTGTATC	-1	True	NA	NA	False	AATAAA	-16	NA	6200842	6186614	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_6186817_6192929_6193055_6197651_6197757_6200488
H1_mix_00002743	chr1	-	2665	6	FSM	ENSG00000116237.16	ENST00000489498.5	2612	6	0	-53	0	53	multi-exon	FALSE	canonical	3	40	junction_4	256.993073836631	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCATTGATTGGTTTGAAA	5	True	NA	14	True	AATGAA	-37	NA	6235972	6223437	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_6225263_6231901_6232120_6233473_6233644_6234404_6234512_6234885_6234975_6235716
H1_mix_00002746	chr1	-	4652	5	NIC	ENSG00000158292.7	novel	4198	6	NA	NA	-11	7	intron_retention	FALSE	canonical	3	44	junction_4	4.49305018890286	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAAGGCTGGTTTCGTAG	-27	True	NA	0	True	AATAAA	-27	NA	6261109	6247345	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_6250625_6251337_6251531_6253717_6254148_6254549_6255015_6260824
H1_mix_00002747	chr1	-	1613	9	FSM	ENSG00000097021.20	ENST00000377855.6	1614	9	2	-1	2	0	multi-exon	FALSE	canonical	3	21	junction_8	220.62039655254	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACGTGTCCTGGGTGGTC	-24	True	NA	-3	True	AATAAA	-18	NA	6385811	6264271	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_6264696_6281101_6281287_6294863_6294981_6318491_6318579_6327298_6327414_6333476_6333569_6339432_6339590_6349748_6349867_6385493
H1_mix_00002748	chr1	-	1806	9	FSM	ENSG00000097021.20	ENST00000361521.9	1806	9	0	0	0	0	multi-exon	FALSE	canonical	3	605	junction_5	51.1246943756146	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACGTGTCCTGGGTGGTC	-6	True	NA	-3	True	AATAAA	-18	NA	6393767	6264271	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_6264696_6281101_6281287_6294863_6294981_6318491_6318579_6327298_6327414_6333476_6333569_6339432_6339590_6349748_6349867_6393256
H1_mix_00002750	chr1	-	1968	10	FSM	ENSG00000215788.11	ENST00000356876.8	1968	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_9	34.6862480310156	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGGGGACGGGGCGCAG	-12	True	NA	NA	False	NA	NA	NA	6466173	6460785	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_6461763_6461993_6462175_6462628_6462667_6462862_6462971_6463071_6463128_6464374_6464454_6464551_6464720_6465087_6465223_6465439_6465561_6466068
H1_mix_00002752	chr1	-	1726	9	FSM	ENSG00000215788.11	ENST00000485036.5	1726	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	39.2681088798531	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCTTCTTGGCGTTTCTGC	-14	True	NA	NA	False	ATTAAA	-31	NA	6466175	6461150	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_6461763_6461993_6462175_6462628_6462667_6462862_6463148_6464374_6464454_6464551_6464720_6465087_6465223_6465439_6465561_6466068
H1_mix_00002754	chr1	-	1198	9	FSM	ENSG00000215788.11	ENST00000414040.6	1198	9	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_4	39.2681088798531	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGCGCCCACTTGCCACC	8996	False	NA	NA	False	NA	NA	NA	6466107	6461433	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_6461763_6461993_6462175_6462628_6462667_6462862_6462971_6464374_6464454_6464551_6464720_6465087_6465223_6465439_6465561_6466068
H1_mix_00002758	chr1	-	3695	21	FSM	ENSG00000171680.23	ENST00000535355.6	3695	21	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_20	14.1572419630379	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGAAGAGTCCTTTGCTT	-4	True	NA	-1	True	TATAAA	-18	NA	6485469	6467121	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_6467573_6467824_6468587_6469041_6469242_6469334_6469451_6469543_6469677_6470235_6470356_6470505_6470644_6470734_6470885_6470989_6471101_6471487_6471638_6471757_6471809_6472526_6472623_6472985_6473175_6473250_6473455_6474012_6474165_6474450_6474588_6475046_6475139_6475461_6475523_6475930_6476037_6477528_6477659_6485323
H1_mix_00002759	chr1	-	3665	21	FSM	ENSG00000171680.23	ENST00000400913.6	3668	21	3	0	1	0	multi-exon	FALSE	canonical	2	12	junction_20	14.9748956590689	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGAAGAGTCCTTTGCTT	-1	True	NA	-1	True	TATAAA	-18	NA	6485951	6467121	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_6467573_6467824_6468587_6469041_6469242_6469334_6469451_6469543_6469677_6470235_6470356_6470505_6470644_6470734_6470885_6470989_6471101_6471487_6471638_6471757_6471809_6472526_6472623_6472985_6473175_6473250_6473455_6474012_6474165_6474450_6474588_6475046_6475139_6475461_6475523_6475930_6476037_6477528_6477659_6485835
H1_mix_00002760	chr1	-	3568	21	FSM	ENSG00000171680.23	ENST00000377728.8	3580	21	12	0	12	0	multi-exon	FALSE	canonical	1	1	junction_20	16.6373074744683	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGAAGAGTCCTTTGCTT	6042	False	NA	-1	True	TATAAA	-18	NA	6491655	6467121	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_6467573_6467824_6468587_6469041_6469242_6469334_6469451_6469543_6469677_6470235_6470356_6470505_6470644_6470734_6470885_6470989_6471101_6471487_6471638_6471757_6471809_6472526_6472623_6472985_6473175_6473250_6473455_6474012_6474165_6474450_6474588_6475046_6475139_6475461_6475523_6475930_6476037_6477528_6477659_6491636
H1_mix_00002761	chr1	-	3731	22	FSM	ENSG00000171680.23	ENST00000400915.8	3731	22	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_21	16.8893961017045	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGAAGAGTCCTTTGCTT	4	True	NA	-1	True	TATAAA	-18	NA	6497424	6467121	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_6467573_6467824_6468587_6469041_6469242_6469334_6469451_6469543_6469677_6470235_6470356_6470505_6470644_6470734_6470885_6470989_6471101_6471487_6471638_6471757_6471809_6472526_6472623_6472985_6473175_6473250_6473455_6474012_6474165_6474450_6474588_6475046_6475139_6475461_6475523_6475930_6476037_6477528_6477659_6496492_6496570_6497319
H1_mix_00002766	chr1	-	6644	12	FSM	ENSG00000162408.11	ENST00000377705.6	6627	12	0	-17	0	17	multi-exon	FALSE	canonical	3	46	junction_9	14.3923763106642	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAGATAGGTCATTTTAT	10	True	NA	17	True	ATTAAA	-36	NA	6554513	6521329	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_6526004_6526695_6526830_6528993_6529172_6531967_6532080_6532462_6532761_6533279_6533442_6541829_6541928_6544825_6544923_6545044_6545181_6549570_6549699_6550395_6550616_6554106
H1_mix_00002767	chr1	-	1692	5	NIC	ENSG00000162408.11	novel	6627	12	NA	NA	-537	59	intron_retention	FALSE	canonical	3	64	junction_4	11.0764389584379	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTACACACTTGTGTG	9217	False	NA	NA	False	NA	NA	NA	6545554	6531935	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_6532761_6533279_6533442_6541829_6541928_6544825_6544923_6545044
H1_mix_00002768	chr1	-	4493	4	FSM	ENSG00000162413.17	ENST00000377658.8	4487	4	0	-6	0	6	multi-exon	FALSE	canonical	3	51	junction_2	5.90668171555645	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATTGCCTTTGTCCTCCT	-2	True	NA	1	True	AATAAA	-22	NA	6602869	6590717	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_6593659_6595484_6595558_6599046_6599453_6601796
H1_mix_00002769	chr1	-	6445	3	FSM	ENSG00000162413.17	ENST00000377663.3	6445	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGAGTCATTGCCTTTGT	692	False	NA	-5	True	AATAAA	-16	NA	6603001	6590723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_6595558_6599046_6599453_6601796
H1_mix_00002770	chr1	-	3014	7	ISM	ENSG00000007923.17	ENST00000685360.1	4233	8	1899	-18	55	0	3prime_fragment	FALSE	canonical	3	630	junction_4	64.9563956307101	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGCGCTCTTCCGTGTA	7083	False	NA	-11	True	AATAAA	-18	NA	6645057	6634167	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_6635701_6636116_6636247_6637197_6637341_6637446_6638365_6639901_6640058_6644557_6644675_6645040
H1_mix_00002772	chr1	-	2172	15	FSM	ENSG00000007923.17	ENST00000294401.11	2210	15	38	0	38	0	multi-exon	FALSE	canonical	3	35	junction_5	204.244151616118	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGTTTGGAAATTAGTCGT	NA	False	NA	NA	False	TATAAA	-24	NA	6701886	6635112	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_6635701_6636116_6636247_6637197_6637341_6637446_6637505_6638294_6638365_6644557_6644675_6645040_6645127_6645788_6645979_6651528_6651603_6652828_6652952_6653910_6654040_6667708_6667811_6678393_6678468_6680907_6681038_6701728
H1_mix_00002775	chr1	-	1084	1	Genic_Genomic	ENSG00000237436.1	novel	NA	NA	NA	NA	-132	0	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGTGTTACACACTCA	9	True	NA	1	True	AATAAA	-16	NA	6784975	6783891	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_-_6783900_6785000
H1_mix_00002776	chr1	-	298	1	FSM	ENSG00000227950.1	ENST00000433407.1	286	1	49	-61	49	61	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAATAAAAATTAAAAA	NA	False	NA	NA	False	AGTAAA	-29	NA	6834569	6834271	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_6834300_6834600
H1_mix_00002777	chr1	-	267	1	FSM	ENSG00000269978.1	ENST00000602916.1	267	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGCTTTAAGAGCCAGT	3584	False	NA	NA	False	AATAAA	-22	NA	7700970	7700703	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_7700700_7701000
H1_mix_00002783	chr1	-	8012	23	FSM	ENSG00000142599.19	ENST00000400908.7	8009	23	0	-3	0	3	multi-exon	TRUE	canonical	3	35	junction_22	26.8848554867876	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGTGTCTCCCGTGCACT	13	True	NA	-2	True	AATAAA	-21	NA	8817640	8352400	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_8355121_8355418_8355600_8356099_8356247_8358195_8358917_8359763_8359987_8360111_8361491_8361762_8361877_8362682_8362845_8364055_8364256_8364745_8364839_8365811_8365975_8422726_8422808_8465924_8466024_8495062_8495163_8497404_8497530_8508626_8508676_8541213_8541319_8556474_8556572_8557417_8557524_8614560_8614687_8624309_8624381_8655972_8656442_8817159
H1_mix_00002785	chr1	-	1781	12	FSM	ENSG00000074800.16	ENST00000234590.10	1781	12	0	0	0	0	multi-exon	FALSE	canonical	3	12558	junction_8	1320.48302582336	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGTGTGCCTGTGTATGT	1	True	NA	-24	True	AATAAA	-25	NA	8878686	8860999	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_8861430_8862886_8862946_8863234_8863344_8863890_8864093_8865284_8865483_8866278_8866502_8867116_8867251_8867987_8868058_8870451_8870511_8871890_8871987_8874823_8874918_8878579
H1_mix_00002786	chr1	-	2548	9	FSM	ENSG00000074800.16	ENST00000464920.2	2548	9	0	0	0	0	multi-exon	FALSE	canonical	3	12558	junction_8	1479.05575875286	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCGTGTGCCTGTGTAT	7681	False	NA	-26	True	AATAAA	-23	NA	8871576	8861001	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_8861430_8862886_8862946_8863234_8863344_8863890_8864093_8865284_8865483_8866278_8866502_8867116_8867251_8867987_8868058_8870451
H1_mix_00002787	chr1	-	1760	10	FSM	ENSG00000074800.16	ENST00000645609.1	1819	10	0	59	0	-59	multi-exon	FALSE	canonical	3	12558	junction_6	1232.98229238434	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGCTCCATGTCTGTCC	-21	True	NA	NA	False	NA	NA	NA	8879092	8863172	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_8863344_8863890_8864093_8865284_8865483_8866278_8866502_8867116_8867251_8867987_8868058_8870451_8870511_8871890_8871987_8874823_8874918_8878579
H1_mix_00002791	chr1	-	960	3	FSM	ENSG00000231789.3	ENST00000415330.3	978	3	18	0	18	0	multi-exon	FALSE	canonical	1	1	junction_1	40.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTCTAATGGTTCATCA	16	True	NA	0	True	AATAAA	-33	NA	9687555	9672404	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_9672720_9680711_9681136_9687334
H1_mix_00002792	chr1	-	4760	19	FSM	ENSG00000171603.18	ENST00000377298.9	4760	19	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_17	202.791848826863	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTTTCTTTTCATCTG	1	True	NA	81	True	CATAAA	-16	NA	9823965	9728925	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_9730706_9731205_9731391_9731760_9731897_9733400_9733547_9733971_9734143_9734947_9735175_9735466_9735616_9735884_9736043_9737497_9737555_9741093_9741257_9743883_9744006_9744394_9744644_9749460_9749647_9749763_9749914_9751472_9751682_9755113_9755310_9756480_9756511_9773271_9773395_9823642
H1_mix_00002793	chr1	-	3829	14	FSM	ENSG00000171603.18	ENST00000435891.5	3829	14	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_8	85.716127058272	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCAGCCGGAGCGGGGT	3647	False	NA	-21	True	AATAAA	-16	NA	9751581	9729027	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_9730706_9731205_9731391_9731760_9731897_9733400_9733547_9733971_9734143_9734947_9735175_9735466_9735616_9735884_9736043_9741093_9741257_9743883_9744006_9744394_9744644_9749460_9749647_9749763_9749914_9751472
H1_mix_00002794	chr1	-	4562	17	NIC	ENSG00000171603.18	novel	4647	18	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	282	junction_8	80.7310349246187	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCAGCCGGAGCGGGGT	10	True	NA	-21	True	AATAAA	-16	NA	9823956	9729027	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_9730706_9731205_9731391_9731760_9731897_9733400_9733547_9733971_9734143_9734947_9735175_9735466_9735616_9735884_9736043_9741093_9741257_9743883_9744006_9744394_9744644_9749460_9749647_9749763_9749914_9751472_9751682_9755113_9755310_9773271_9773395_9823642
H1_mix_00002795	chr1	-	4647	18	FSM	ENSG00000171603.18	ENST00000361311.4	4647	18	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_8	128.196135413468	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCAGCCGGAGCGGGGT	631	False	NA	-21	True	AATAAA	-16	NA	9823984	9729027	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_9730706_9731205_9731391_9731760_9731897_9733400_9733547_9733971_9734143_9734947_9735175_9735466_9735616_9735884_9736043_9737497_9737555_9741093_9741257_9743883_9744006_9744394_9744644_9749460_9749647_9749763_9749914_9751472_9751682_9755113_9755310_9773271_9773395_9823642
H1_mix_00002796	chr1	-	4395	17	NNC	ENSG00000171603.18	novel	4647	18	NA	NA	12	-6	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_15	173.903068816367	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAACTAACTCCAGCCGGAG	13	True	NA	-27	True	AATAAA	-10	NA	9823953	9729033	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_9730706_9731205_9731391_9731760_9731897_9733400_9733547_9733971_9734143_9734947_9735175_9735466_9735616_9735884_9736043_9737497_9737555_9741093_9741257_9743883_9744006_9744394_9744644_9749460_9749647_9749763_9749914_9751472_9751663_9773271_9773395_9823642
H1_mix_00002798	chr1	-	3006	6	FSM	ENSG00000178585.15	ENST00000377263.6	3006	6	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_5	311.13572601037	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGTGAGCTGAGCTGGT	-36	True	NA	-8	True	AATAAA	-16	NA	9910269	9848275	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_9850777_9871186_9871278_9871968_9872089_9877904_9877990_9883704_9883739_9910094
H1_mix_00002799	chr1	-	1206	5	FSM	ENSG00000178585.15	ENST00000400904.7	1206	5	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_4	29.1922506840428	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGGGGTTTGTGTTTGA	8	True	NA	-5	True	NA	NA	NA	9910336	9850108	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_9850777_9871186_9871278_9871968_9872089_9877904_9877990_9910094
H1_mix_00002800	chr1	-	816	7	NIC	ENSG00000162441.12	novel	652	5	NA	NA	92	-5	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	50.5360157599399	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAGTATAGGCCGGGTGT	684	False	NA	-8	True	AATAAA	-18	NA	9942676	9922117	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_9922359_9931890_9931973_9932802_9932899_9934761_9934861_9935491_9935628_9936518_9936628_9942623
H1_mix_00002801	chr1	-	4985	8	FSM	ENSG00000162441.12	ENST00000377223.6	4989	8	4	0	4	0	multi-exon	FALSE	canonical	3	87	junction_7	22.9213384230075	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTCCACGTTTTTCTT	-27	True	NA	0	True	AATAAA	-35	NA	9943387	9926292	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_9930458_9931890_9931973_9932802_9932899_9934761_9934861_9935491_9935628_9936518_9936628_9942623_9942783_9943248
H1_mix_00002802	chr1	-	945	8	FSM	ENSG00000162441.12	ENST00000377213.1	945	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_7	41.1398808447274	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTTTATGCTCTTCAT	-47	False	NA	-21	True	CATAAA	-14	NA	9943407	9930252	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_9930458_9931890_9931973_9932802_9932899_9934761_9934861_9935491_9935628_9936518_9936628_9942623_9942783_9943348
H1_mix_00002804	chr1	-	6035	6	FSM	ENSG00000160049.12	ENST00000377038.8	6035	6	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	118.354383104302	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTGTTCAAGCTTTTTT	445	False	10472552	-14	True	AATAAA	-33	NA	10472529	10456521	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_10461703_10463057_10463210_10463430_10463621_10467189_10467333_10469176_10469339_10472322
H1_mix_00002805	chr1	-	1403	5	FSM	ENSG00000160049.12	ENST00000377036.2	1403	5	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_1	55.599010782567	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGTTGGTGTTGTAAG	17	True	NA	-9	True	AGTAAA	-15	NA	10472488	10462467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_10463210_10463430_10463621_10467189_10467333_10469176_10469339_10472322
H1_mix_00002808	chr1	-	545	2	FSM	ENSG00000116649.10	ENST00000475189.1	545	2	0	0	0	0	multi-exon	FALSE	canonical	3	2566	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCCTGTGTCTCCTGACC	4835	False	NA	-1	True	NA	NA	NA	11055204	11054583	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_11054886_11054961
H1_mix_00002809	chr1	-	1260	8	FSM	ENSG00000116649.10	ENST00000376957.7	1260	8	0	0	0	0	multi-exon	FALSE	canonical	3	2518	junction_2	68.1741467545747	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGAGTCCTGTGTCTCC	21	True	NA	-6	True	NA	NA	NA	11060018	11054588	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_11054886_11054961_11055085_11055780_11055927_11056010_11056095_11056603_11056758_11058799_11058893_11059224_11059346_11059776
H1_mix_00002812	chr1	-	412	2	FSM	ENSG00000171824.14	ENST00000472078.1	412	2	0	0	0	0	multi-exon	FALSE	canonical	3	658	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAGATCAACGAAATGCAC	NA	False	NA	NA	False	NA	NA	NA	11080857	11079769	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_11079823_11080498
H1_mix_00002813	chr1	-	8746	58	NNC	ENSG00000198793.13	novel	8721	58	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_57	58.2236642217562	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTATATGAGTGGCGTTT	-1	True	NA	-5	True	AATAAA	-21	NA	11262551	11106536	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_11107501_11108180_11108287_11109289_11109371_11109648_11109730_11112851_11112918_11114317_11114454_11114812_11114888_11115395_11115469_11117003_11117087_11121245_11121369_11121978_11122127_11124497_11124634_11126621_11126797_11127009_11127145_11127623_11127807_11128003_11128127_11128453_11128553_11128854_11128952_11129737_11129839_11130528_11130778_11133079_11133198_11134350_11134467_11139303_11139436_11139532_11139659_11144647_11144756_11144967_11145046_11146675_11146792_11150125_11150227_11157151_11157292_11167441_11167518_11199257_11199404_11199540_11199704_11204560_11204704_11209311_11209459_11210813_11210907_11212311_11212475_11212795_11212909_11213398_11213567_11216147_11216235_11228667_11228919_11230924_11231055_11231299_11231435_11232435_11232529_11233397_11233488_11234142_11234266_11237842_11238049_11238401_11238618_11240302_11240548_11241552_11241682_11243113_11243301_11247624_11247734_11247818_11248095_11253838_11253974_11255991_11256193_11256932_11257166_11258484_11258594_11259247_11259451_11262444
H1_mix_00002814	chr1	-	8721	58	FSM	ENSG00000198793.13	ENST00000361445.9	8721	58	0	0	0	0	multi-exon	TRUE	canonical	3	182	junction_57	51.1329506246355	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATATGAGTGGCGTTTTA	-1	True	NA	-3	True	AATAAA	-23	NA	11262551	11106534	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_11107501_11108180_11108287_11109289_11109371_11109648_11109730_11112851_11112918_11114317_11114454_11114812_11114888_11115395_11115469_11117003_11117087_11121245_11121369_11121978_11122127_11124497_11124634_11126621_11126797_11127009_11127145_11127623_11127807_11128003_11128127_11128453_11128553_11128854_11128952_11129737_11129839_11130528_11130778_11133079_11133198_11134350_11134467_11139303_11139436_11139532_11139659_11144647_11144756_11144967_11145046_11146675_11146792_11150125_11150227_11157151_11157292_11167441_11167518_11199257_11199404_11199540_11199704_11204560_11204704_11209311_11209459_11210813_11210907_11212311_11212475_11212795_11212909_11213398_11213567_11216147_11216235_11228667_11228919_11230924_11231055_11231299_11231435_11232435_11232529_11233397_11233488_11234142_11234266_11237842_11238049_11238401_11238618_11240302_11240548_11241552_11241682_11243113_11243301_11247624_11247734_11247818_11248095_11253838_11253974_11255991_11256193_11256932_11257166_11258484_11258594_11259247_11259424_11262444
H1_mix_00002815	chr1	-	2086	5	FSM	ENSG00000198793.13	ENST00000495435.1	2356	5	270	0	270	0	multi-exon	FALSE	canonical	3	286	junction_4	3.93700393700591	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTAGGTGTTGGGACCAGG	NA	False	NA	NA	False	NA	NA	NA	11144755	11131593	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_11133198_11134350_11134467_11139303_11139436_11139532_11139659_11144647
H1_mix_00002816	chr1	-	1616	6	FSM	ENSG00000116661.11	ENST00000354287.5	1287	6	-287	-42	-287	42	multi-exon	FALSE	canonical	3	404	junction_3	23.4384299815495	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTGTCTCCTGAGGGC	-32	True	NA	3	True	GATAAA	-19	NA	11654716	11648344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_11648829_11649086_11649226_11649778_11649875_11649944_11650075_11650465_11650835_11654318
H1_mix_00002817	chr1	-	1120	9	FSM	ENSG00000116670.15	ENST00000376692.9	1053	9	0	-67	0	67	multi-exon	FALSE	canonical	3	992	junction_8	689.030659695198	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCCACCAAAATGCCAGGG	-10	True	NA	47	True	GGGGCT	-4	NA	11681148	11674412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_11674817_11675081_11675175_11675657_11675732_11676045_11676141_11676847_11676949_11677542_11677615_11680352_11680472_11680561_11680614_11681038
H1_mix_00002819	chr1	-	1002	9	FSM	ENSG00000116670.15	ENST00000376672.5	1002	9	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_4	1048.27068903981	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTGTGAGTTGTTTCAAT	-2	True	NA	1	True	NA	NA	NA	11691477	11674524	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_11674817_11675081_11675175_11675657_11675732_11676045_11676141_11676808_11676949_11677542_11677615_11680352_11680472_11680561_11680614_11691412
H1_mix_00002820	chr1	-	993	9	NNC	ENSG00000116670.15	novel	1053	9	NA	NA	-152	-1	at_least_one_novel_splicesite	FALSE	canonical	3	973	junction_8	695.152040473881	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGAGCCATCATTAACTG	4	True	NA	-21	True	AATAAA	-22	NA	11691802	11674480	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_11674817_11675081_11675175_11675657_11675732_11676045_11676141_11676847_11676949_11677542_11677615_11680352_11680472_11680561_11680614_11691751
H1_mix_00002822	chr1	-	872	9	FSM	ENSG00000116670.15	ENST00000376667.7	872	9	0	0	0	0	multi-exon	FALSE	canonical	3	950	junction_8	702.565966653666	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACTGTCAGACTTTGGGG	15	True	NA	NA	False	CATAAA	-37	NA	11691609	11674747	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_11674817_11675081_11675175_11675657_11675732_11676045_11676141_11676847_11676949_11677542_11677615_11680352_11680472_11680561_11680614_11691412
H1_mix_00002824	chr1	-	7004	12	FSM	ENSG00000177000.13	ENST00000376590.9	7018	12	14	0	14	0	multi-exon	FALSE	canonical	3	19	junction_11	6.36882905023163	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTACTGTCCTCGTGTACC	10	True	NA	NA	False	AATAAA	-22	NA	11805950	11785722	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_11790899_11791206_11791327_11792277_11792380_11793906_11794090_11794357_11794539_11794728_11794864_11795097_11795349_11796205_11796400_11800211_11800323_11801160_11801400_11802880_11803130_11805887
H1_mix_00002827	chr1	-	2254	2	FSM	ENSG00000177000.13	ENST00000641909.1	2254	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGGTGGTGCACGGCTG	7	True	NA	NA	False	AATACA	-12	NA	11803526	11799791	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_11801400_11802880
H1_mix_00002828	chr1	-	1911	3	FSM	ENSG00000177000.13	ENST00000641437.1	1911	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	9	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGAGACCTGCCTGGCC	8	True	NA	NA	False	NA	NA	NA	11806006	11799856	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_11801400_11802880_11803130_11805887
H1_mix_00002830	chr1	-	718	3	FSM	ENSG00000120937.9	ENST00000376468.4	708	3	0	-10	0	10	multi-exon	FALSE	canonical	3	101	junction_1	8	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTTGTCTTGGCGCATT	-1	True	NA	-3	True	AATAAA	-30	NA	11858945	11857453	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_11857672_11858213_11858470_11858701
H1_mix_00002831	chr1	-	2819	3	FSM	ENSG00000116685.16	ENST00000376572.8	2819	3	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_2	51.5	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACCGGTTTGTGTGTGGTT	-12	True	NA	-7	True	AATAAA	-18	NA	11926427	11919590	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_11920333_11922635_11923490_11925204
H1_mix_00002832	chr1	-	2201	6	FSM	ENSG00000162496.9	ENST00000616661.5	2201	6	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_5	30.4893424002552	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTTGTTCAAATCTTC	5	True	NA	-4	True	AATAAA	-19	NA	12618210	12567909	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_12568425_12572727_12572854_12578717_12578957_12579292_12579413_12580522_12580667_12617153
H1_mix_00002833	chr1	-	4638	1	FSM	ENSG00000272482.1	ENST00000606790.1	345	1	-56	-4237	-56	4237	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCTGTTTATTTGGGAAG	668	False	NA	NA	False	AAAAAG	-40	NA	12619300	12614662	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_12614700_12619300
H1_mix_00002835	chr1	-	4385	8	FSM	ENSG00000132906.18	ENST00000546424.5	4463	8	78	0	-20	0	multi-exon	FALSE	canonical	3	85	junction_5	19.0477380948661	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCATATTCTAGGCTCAC	-11	True	NA	NA	False	NA	NA	NA	15524367	15490831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_15494002_15495272_15495453_15504610_15504759_15505989_15506080_15506898_15507076_15507872_15507908_15518109_15518396_15524068
H1_mix_00002836	chr1	-	2808	9	FSM	ENSG00000132906.18	ENST00000333868.10	2808	9	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_6	25.8018289080445	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTTGCATAGTTGTCA	10	True	NA	-4	True	AATAAA	-14	NA	15524215	15491400	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_15493036_15493891_15494002_15495272_15495453_15504610_15504759_15505989_15506080_15506898_15507076_15507872_15507908_15518109_15518396_15524068
H1_mix_00002837	chr1	-	1621	5	FSM	ENSG00000132906.18	ENST00000348549.9	1621	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	46.8688329276503	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTATTTCTTCCCTC	9	True	NA	0	True	AATAAA	-23	NA	15524347	15492269	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_15493036_15493891_15494002_15495272_15495453_15518109_15518396_15524068
H1_mix_00002838	chr1	-	387	1	FSM	ENSG00000272510.1	ENST00000606186.1	346	1	-44	3	-44	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAGAATTTTCTGACATT	NA	False	NA	NA	False	AATAAA	-31	NA	15566000	15565613	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_15565600_15566000
H1_mix_00002840	chr1	-	274	1	FSM	ENSG00000252417.1	ENST00000516608.1	68	1	33	-239	33	239	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCCATCTCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	15608112	15607838	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_15607800_15608100
H1_mix_00002841	chr1	-	2255	1	FSM	ENSG00000233954.6	ENST00000483273.2	2180	1	-78	3	-78	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTAGCCGGGTGTGGTGG	NA	False	NA	NA	False	AATAAA	-28	NA	15809426	15807171	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_15807200_15809400
H1_mix_00002842	chr1	-	2288	1	Genic_Genomic	ENSG00000179743.4	novel	NA	NA	NA	NA	11787	401	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGCTAAATTTGTCTTC	NA	False	NA	-8	True	NA	NA	NA	15836360	15834072	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_-_15834100_15836400
H1_mix_00002846	chr1	-	1716	7	FSM	ENSG00000185519.9	ENST00000375662.5	1720	7	0	4	0	-4	multi-exon	FALSE	canonical	3	14	junction_1	8.65383665716478	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGACCTTGGCCTGGTC	-27	True	NA	-5	True	ATTAAA	-16	NA	16073651	16057772	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16058718_16059493_16059605_16059868_16060052_16062098_16062193_16062498_16062535_16063520_16063637_16073420
H1_mix_00002848	chr1	-	3946	17	FSM	ENSG00000142627.13	ENST00000358432.8	3946	17	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_15	14.115040736746	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCTTTCAGTCTTGGG	1	True	NA	0	True	AATAAA	-22	NA	16156069	16124336	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16125321_16129433_16129590_16130225_16130420_16131720_16131871_16132063_16132274_16132377_16132440_16133179_16133369_16133480_16133607_16133859_16133916_16134467_16134568_16135035_16135190_16135654_16135771_16137852_16138186_16138274_16138431_16148377_16149048_16150895_16150964_16155847
H1_mix_00002849	chr1	-	3320	16	FSM	ENSG00000142632.17	ENST00000270747.8	3322	16	0	2	0	-2	multi-exon	FALSE	canonical	3	124	junction_15	45.0642011159881	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCCTGTGGCTTC	-13	True	NA	-1	True	ATTAAA	-19	NA	16212652	16197855	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16198745_16199149_16199255_16201781_16201862_16202415_16202575_16204758_16204920_16205086_16205177_16205350_16205426_16205537_16205668_16205930_16206084_16206179_16206341_16206947_16207211_16207521_16207599_16207674_16207778_16207943_16208226_16208642_16209084_16212501
H1_mix_00002850	chr1	-	933	6	FSM	ENSG00000142632.17	ENST00000449495.1	921	6	-12	0	-12	0	multi-exon	FALSE	canonical	3	177	junction_5	19.1248529406111	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTACCTCCACCTCTTC	6084	False	NA	NA	False	NA	NA	NA	16206555	16204810	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16204920_16205086_16205177_16205350_16205426_16205537_16205668_16205930_16206084_16206179
H1_mix_00002854	chr1	-	1574	5	FSM	ENSG00000132881.12	ENST00000375599.8	1574	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	5.1720402163943	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAGAGACGTGTTCGTTC	-3	True	NA	-4	True	GATAAA	-22	NA	16237183	16231691	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16232298_16232509_16232647_16232892_16233018_16233611_16233765_16236630
H1_mix_00002856	chr1	-	6220	10	FSM	ENSG00000037637.11	ENST00000375592.8	6227	10	7	0	7	0	multi-exon	FALSE	canonical	3	212	junction_8	8.24621125123532	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTTTTATTAGCAAAAAAA	-17	True	NA	0	True	AATAAA	-18	NA	16352473	16246839	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16251786_16252287_16252405_16253095_16253153_16253634_16253732_16255710_16255822_16256605_16256760_16294782_16294918_16305802_16305920_16315168_16315436_16352254
H1_mix_00002857	chr1	-	1137	3	FSM	ENSG00000037637.11	ENST00000456164.5	1153	3	16	0	16	0	multi-exon	FALSE	canonical	3	219	junction_2	1	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTTCTCCAGGCTCTC	3338	False	NA	NA	False	NA	NA	NA	16253411	16251081	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16251786_16252287_16252405_16253095
H1_mix_00002859	chr1	-	4253	19	NIC	ENSG00000219481.11	novel	5932	29	NA	NA	10812	-92	combination_of_known_splicesites	TRUE	canonical	3	20	junction_6	16.6562930679498	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTTACATTCAGTGTT	72	False	NA	NA	False	ATTAAA	-32	NA	16592237	16562410	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_16564187_16564806_16564919_16565632_16565806_16566407_16566460_16567178_16567352_16567978_16568031_16569072_16569237_16573141_16573194_16574486_16574693_16575156_16575230_16576266_16576482_16583593_16583697_16585488_16585699_16587049_16587262_16587724_16587798_16588848_16589064_16589898_16590002_16591846_16592057_16592158
H1_mix_00002861	chr1	-	488	4	FSM	ENSG00000219481.11	ENST00000420513.1	488	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	6.12825877028341	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGGACAGTGTGGAGTGC	4908	False	NA	NA	False	NA	NA	NA	16608650	16593561	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16593754_16594591_16594662_16594930_16595014_16608507
H1_mix_00002862	chr1	-	1492	5	NIC	ENSG00000219481.11	novel	488	4	NA	NA	0	678	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	65.4560921534428	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCAAACTGGTCTAGAGT	24	True	NA	NA	False	NA	NA	NA	16613534	16592883	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_16593754_16594591_16594662_16594930_16595014_16608507_16608780_16613337
H1_mix_00002864	chr1	-	3044	3	FSM	ENSG00000219481.11	ENST00000449853.2	2755	3	0	-289	0	289	multi-exon	TRUE	canonical	3	50	junction_1	67.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGATTCAGGAAGGAGGCT	24	True	NA	NA	False	NA	NA	NA	16613534	16605116	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16607692_16608507_16608780_16613337
H1_mix_00002867	chr1	-	1753	6	FSM	ENSG00000215908.10	ENST00000640476.1	1750	6	0	-3	0	0	multi-exon	FALSE	canonical	3	32	junction_2	38.9173483166569	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCAGTGTTCTCCTGCTGT	NA	False	NA	-4	True	AATAAA	-26	NA	16628652	16618252	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16619104_16619844_16620039_16625774_16626006_16626352_16626500_16627144_16627290_16628467
H1_mix_00002868	chr1	-	2178	7	FSM	ENSG00000215908.10	ENST00000639594.1	2175	7	0	-3	0	0	multi-exon	FALSE	canonical	2	4	junction_2	45.4107794349413	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCAGTGTTCTCCTGCTGT	NA	False	NA	-4	True	AATAAA	-26	NA	16631109	16618252	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16619104_16619844_16620246_16625774_16626006_16626352_16626500_16627144_16627290_16628467_16628651_16630889
H1_mix_00002870	chr1	-	6535	2	ISM	ENSG00000215908.10	ENST00000639481.1	1296	4	1430	-572	1430	572	3prime_fragment	FALSE	canonical	3	118	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCCAAATGTTGCTGATC	NA	False	NA	NA	False	AATAAA	-33	NA	16624956	16617680	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_16619104_16619844
H1_mix_00002873	chr1	-	1145	2	FSM	ENSG00000238142.3	ENST00000654227.2	1654	2	142	367	0	-183	multi-exon	FALSE	canonical	3	75	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAACTTTTTTTCTCTAGG	149	False	NA	NA	False	NA	NA	NA	16889518	16887943	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16888786_16889215
H1_mix_00002874	chr1	-	968	2	FSM	ENSG00000238142.3	ENST00000671472.2	1203	2	52	183	-1	-183	multi-exon	FALSE	canonical	3	100	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAACTTTTTTTCTCTAGG	-6	True	NA	NA	False	NA	NA	NA	16889673	16887943	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16888786_16889547
H1_mix_00002875	chr1	-	531	2	FSM	ENSG00000238142.3	ENST00000660464.2	556	2	25	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGGTTTTATCATTTTAT	166	False	NA	-1	True	AATAAA	-31	NA	16889501	16888537	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16888783_16889215
H1_mix_00002878	chr1	-	1045	9	FSM	ENSG00000117122.14	ENST00000375535.4	1045	9	0	0	0	0	multi-exon	FALSE	canonical	3	4186	junction_8	418.305790510961	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCAAGTCACTTTTTCGGT	14	True	NA	NA	False	ATTAAA	-18	NA	16980620	16974501	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16975024_16975268_16975343_16975642_16975731_16976500_16976546_16976707_16976795_16976896_16976924_16977108_16977199_16978236_16978315_16980586
H1_mix_00002879	chr1	-	2371	6	FSM	ENSG00000117122.14	ENST00000490075.5	2371	6	0	0	0	0	multi-exon	FALSE	canonical	3	4186	junction_5	517.361382401122	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCAAGTCACTTTTTCGGT	13	True	NA	NA	False	ATTAAA	-18	NA	16980621	16974501	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16975024_16975268_16975343_16975642_16975731_16976500_16976546_16976707_16978315_16980586
H1_mix_00002880	chr1	-	657	5	FSM	ENSG00000117122.14	ENST00000478684.5	657	5	0	0	0	0	multi-exon	FALSE	canonical	3	4789	junction_3	136.224768305914	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGAGTGCAGGCTGGCTG	-7	True	NA	NA	False	NA	NA	NA	16978314	16976170	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16976546_16976707_16976795_16976896_16976924_16977108_16977199_16978236
H1_mix_00002882	chr1	-	1854	9	FSM	ENSG00000159363.19	ENST00000466561.1	1851	9	0	-3	0	2	multi-exon	FALSE	canonical	3	494	junction_8	31.1947010724578	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGCCTGTCTTGTACC	NA	False	NA	-7	True	AATAAA	-22	NA	16991858	16985955	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16986359_16986462_16986957_16987045_16987270_16988137_16988235_16988321_16988475_16989690_16989771_16989886_16990004_16990126_16990288_16991733
H1_mix_00002883	chr1	-	3993	29	NIC	ENSG00000159363.19	novel	3996	29	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	66	junction_24	93.7640329633438	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGTGCCTGTCTTGTA	0	True	NA	-9	True	AATAAA	-20	NA	17011928	16985957	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_16986359_16986462_16986633_16986804_16986957_16987045_16987270_16988137_16988235_16988321_16988475_16989690_16989771_16989886_16990004_16990126_16990288_16991733_16991859_16992008_16992130_16992242_16992403_16992485_16992582_16993628_16993836_16995975_16996165_16996253_16996301_16996385_16996497_16997019_16997176_17000010_17000143_17000245_17000313_17000399_17000535_17002033_17002104_17002295_17002374_17004331_17004409_17004691_17004822_17005013_17005073_17005373_17005557_17005683_17005779_17011728
H1_mix_00002884	chr1	-	3983	29	FSM	ENSG00000159363.19	ENST00000452699.5	3981	29	0	-2	0	2	multi-exon	FALSE	canonical	3	205	junction_24	72.1542688994086	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGCCTGTCTTGTACC	0	True	NA	-7	True	AATAAA	-22	NA	17011928	16985955	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16986359_16986462_16986633_16986804_16986957_16987045_16987270_16988137_16988235_16988321_16988475_16989690_16989771_16989886_16990004_16990126_16990288_16991733_16991859_16992008_16992130_16992242_16992403_16992485_16992582_16993628_16993836_16995975_16996165_16996253_16996301_16996385_16996497_16997019_16997176_17000010_17000143_17000245_17000313_17000399_17000535_17002033_17002104_17002295_17002374_17004331_17004412_17004706_17004822_17005013_17005073_17005373_17005557_17005683_17005779_17011728
H1_mix_00002885	chr1	-	3998	29	FSM	ENSG00000159363.19	ENST00000326735.13	3996	29	0	-2	0	2	multi-exon	FALSE	canonical	3	197	junction_24	73.3246467876294	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGCCTGTCTTGTACC	0	True	NA	-7	True	AATAAA	-22	NA	17011928	16985955	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16986359_16986462_16986633_16986804_16986957_16987045_16987270_16988137_16988235_16988321_16988475_16989690_16989771_16989886_16990004_16990126_16990288_16991733_16991859_16992008_16992130_16992242_16992403_16992485_16992582_16993628_16993836_16995975_16996165_16996253_16996301_16996385_16996497_16997019_16997176_17000010_17000143_17000245_17000313_17000399_17000535_17002033_17002104_17002295_17002374_17004331_17004412_17004691_17004822_17005013_17005073_17005373_17005557_17005683_17005779_17011728
H1_mix_00002888	chr1	-	1015	8	FSM	ENSG00000117118.10	ENST00000375499.8	1015	8	0	0	0	0	multi-exon	FALSE	canonical	3	734	junction_4	37.320454532744	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTGTTCCTTTACTTGC	-2	True	NA	18	True	AATAAA	-31	NA	17054032	17018721	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_17018959_17022607_17022731_17023972_17024075_17027748_17027866_17028599_17028737_17033059_17033146_17044760_17044889_17053947
H1_mix_00002892	chr1	-	1613	11	FSM	ENSG00000117115.13	ENST00000375481.1	1607	11	-28	22	-12	-22	multi-exon	FALSE	canonical	3	19	junction_5	5.9464274989274	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAACTCTTTTCCCCAAG	4118	False	NA	-22	True	AATATA	-10	NA	17119463	17079052	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_17079416_17082544_17082653_17083725_17083838_17084598_17084703_17086520_17086700_17092407_17092534_17093566_17093685_17095908_17095971_17102986_17103060_17104877_17105062_17119279
H1_mix_00002893	chr1	-	4045	13	FSM	ENSG00000179051.14	ENST00000375436.9	4040	13	0	-5	0	5	multi-exon	FALSE	canonical	3	1143	junction_12	146.748367395802	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCATTTCTTTTTCGGT	-7	True	NA	-10	True	AATAAA	-26	NA	17439677	17406754	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_17409195_17409973_17410052_17412121_17412195_17413072_17413179_17413536_17413718_17416479_17416647_17420713_17420829_17422202_17422292_17422704_17422837_17425540_17425685_17429105_17429200_17438229_17438523_17439544
H1_mix_00002894	chr1	-	783	2	FSM	ENSG00000179051.14	ENST00000474892.1	783	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTGGGTGCTTTAAAA	3228	False	NA	NA	False	GGGGCT	-23	NA	17409046	17407838	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_17408555_17408979
H1_mix_00002896	chr1	-	3147	15	FSM	ENSG00000159423.17	ENST00000375341.8	3139	15	0	-8	0	8	multi-exon	FALSE	canonical	3	119	junction_4	15.6010530780091	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGATGGTCTTTCTGGAGG	-14	True	NA	0	True	AATAAA	-24	NA	18902555	18871421	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_18872958_18874462_18874582_18875381_18875504_18876314_18876468_18877207_18877256_18877415_18877613_18879299_18879374_18881699_18881888_18883123_18883199_18883278_18883429_18885472_18885629_18886463_18886512_18889361_18889455_18890011_18890106_18902461
H1_mix_00002897	chr1	-	3247	14	FSM	ENSG00000159423.17	ENST00000538839.5	2957	14	-283	-7	-87	5	multi-exon	FALSE	canonical	3	11	junction_3	38.7565608112634	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGATGGTCTTTCTGG	NA	False	NA	-3	True	AATAAA	-21	NA	18902811	18871424	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_18872958_18874462_18874582_18875381_18875504_18877207_18877256_18877415_18877613_18879299_18879374_18881699_18881888_18883123_18883199_18883278_18883429_18885472_18885629_18886463_18886512_18889361_18889455_18890011_18890106_18902461
H1_mix_00002898	chr1	-	2132	16	FSM	ENSG00000159423.17	ENST00000290597.9	2124	16	0	-8	0	8	multi-exon	FALSE	canonical	3	13	junction_1	35.8723663377072	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGATGGTCTTTCTGGAGG	-12	True	NA	0	True	AATAAA	-24	NA	18902553	18871421	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_18871791_18872803_18872958_18874462_18874582_18875381_18875504_18876314_18876468_18877207_18877256_18877415_18877613_18879299_18879374_18881699_18881888_18883123_18883199_18883278_18883429_18885472_18885629_18886463_18886512_18889361_18889455_18890011_18890106_18902461
H1_mix_00002900	chr1	-	3881	3	FSM	ENSG00000127481.15	ENST00000459947.5	3873	3	0	-8	0	0	multi-exon	FALSE	canonical	3	359	junction_1	12.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAAGGTGTTGCCTGCTGCT	6588	False	NA	-8	True	AATAAA	-26	NA	19081306	19074509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_19074897_19076739_19076903_19077975
H1_mix_00002901	chr1	-	3479	21	FSM	ENSG00000127481.15	ENST00000375224.1	3475	21	0	-4	0	0	multi-exon	FALSE	canonical	3	311	junction_18	50.9042974610199	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAAGGTGTTGCCTGCTGCT	NA	False	NA	-8	True	AATAAA	-26	NA	19104916	19074509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_19074897_19076739_19076903_19077975_19078067_19081348_19081574_19084503_19084699_19086144_19086271_19086678_19086822_19087815_19087930_19088758_19088978_19092818_19092919_19093312_19093487_19093948_19094140_19094905_19095026_19095544_19095653_19096522_19096651_19097192_19097281_19099596_19099678_19100375_19100574_19101519_19101642_19104083_19104258_19104584
H1_mix_00002902	chr1	-	15892	106	FSM	ENSG00000127481.15	ENST00000375254.8	15892	106	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_88	122.388024253706	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAAGGTGTTGCCTGCTGCT	-3	True	NA	-8	True	AATAAA	-26	NA	19210266	19074509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_19074897_19076739_19076903_19077975_19078067_19081348_19081574_19084503_19084699_19086144_19086271_19086678_19086822_19087815_19087930_19088758_19088978_19092818_19092919_19093312_19093487_19093948_19094140_19094905_19095026_19095544_19095653_19096522_19096651_19097192_19097281_19099596_19099678_19100375_19100574_19101519_19101642_19104083_19104258_19104584_19104667_19105047_19105190_19105732_19105843_19106568_19106727_19106836_19106967_19110095_19110224_19110379_19110465_19110741_19110833_19112523_19112868_19113698_19113828_19113944_19114071_19114810_19114950_19115397_19115638_19117220_19117415_19117822_19117911_19118871_19118958_19119556_19119702_19120179_19120349_19121188_19121435_19121933_19122013_19122832_19123061_19124540_19124691_19126445_19126656_19127622_19127740_19128210_19128319_19128977_19129075_19138006_19138182_19139082_19139221_19140787_19140893_19141346_19141525_19141646_19141778_19143979_19144092_19144785_19144908_19145792_19145934_19146825_19147001_19147992_19148128_19148562_19148627_19150576_19150794_19151642_19151860_19152312_19152477_19153300_19153503_19153767_19153940_19154917_19155076_19155440_19155669_19156270_19156424_19156766_19156926_19157814_19157998_19160110_19160282_19160916_19161148_19161588_19161737_19161826_19161898_19162419_19162612_19163763_19163828_19164252_19164442_19164798_19164998_19165248_19165350_19165655_19165758_19167021_19167232_19168026_19168185_19169434_19169533_19170761_19170884_19172863_19173094_19173180_19173307_19173438_19173622_19174318_19174448_19174953_19175034_19176591_19176728_19177460_19177744_19179050_19179221_19183810_19183897_19184015_19184176_19185098_19185287_19186539_19186658_19187163_19187302_19187440_19187541_19192187_19192379_19192480_19192541_19193432_19193558_19197140_19197266_19197669_19197812_19197946_19198050_19198540_19198681_19198798_19198929_19199650_19199755_19201717_19201816_19210072
H1_mix_00002905	chr1	-	6913	23	FSM	ENSG00000127463.16	ENST00000477853.6	6640	23	-273	0	-245	0	multi-exon	TRUE	canonical	3	187	junction_14	34.017253765097	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTCTGTTTTCTTTACTT	NA	False	NA	-2	True	AATAAA	-33	NA	19251797	19215659	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_19219483_19219568_19219699_19220763_19220849_19222623_19222835_19223395_19223570_19227312_19227451_19230843_19230964_19231260_19231423_19232623_19232774_19232935_19233136_19235129_19235253_19237141_19237239_19238016_19238140_19238794_19238858_19239230_19239303_19239817_19239986_19240296_19240447_19241015_19241143_19242344_19242474_19243613_19243708_19243949_19244016_19244905_19245031_19251414
H1_mix_00002906	chr1	-	6616	23	FSM	ENSG00000127463.16	ENST00000375199.7	5408	23	0	-1208	0	-6	multi-exon	FALSE	canonical	3	32	junction_14	59.234737546742	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAACCATTCTGTTTTCT	20	False	NA	-8	True	AATAAA	-27	NA	19251509	19215665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_19219483_19219568_19219699_19220763_19220849_19222623_19222835_19223395_19223570_19227312_19227451_19230843_19230964_19231260_19231423_19232623_19232774_19232935_19233136_19235129_19235253_19237141_19237239_19238016_19238140_19238794_19238855_19239230_19239303_19239817_19239986_19240296_19240447_19241015_19241143_19242344_19242474_19243613_19243708_19243949_19244016_19244905_19245031_19251414
H1_mix_00002912	chr1	-	1675	9	FSM	ENSG00000077549.19	ENST00000264202.8	1675	9	0	0	0	0	multi-exon	FALSE	canonical	3	1301	junction_8	206.212269276103	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTGGCCTTCTGTGTTCC	-11	True	NA	-23	True	AATAAA	-21	NA	19485539	19338774	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_19339618_19344357_19344435_19345186_19345253_19356634_19356752_19357421_19357564_19378539_19378654_19385504_19385627_19419660_19419751_19485435
H1_mix_00002915	chr1	-	2063	8	FSM	ENSG00000077549.19	ENST00000482808.2	2063	8	0	0	0	0	multi-exon	FALSE	canonical	3	1301	junction_7	201.103993810493	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTGTGAAAGAGAGAAGAAA	-9	True	NA	34	True	AAAACA	-26	NA	19485537	19339136	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_19339618_19344357_19345253_19356634_19356752_19357421_19357564_19378539_19378654_19385504_19385627_19419660_19419751_19485435
H1_mix_00002916	chr1	-	5957	8	FSM	ENSG00000077549.19	ENST00000375144.6	5943	8	0	-14	0	0	multi-exon	FALSE	canonical	3	1301	junction_7	198.270995748501	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCACTGTCTGCCAGCC	-9	True	NA	-60	True	NA	NA	NA	19485537	19339230	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_19344435_19345186_19345253_19356634_19356752_19357421_19357564_19378539_19378654_19385504_19385627_19419660_19419751_19485435
H1_mix_00002925	chr1	-	2429	4	FSM	ENSG00000090432.7	ENST00000264198.5	2428	4	0	-1	0	1	multi-exon	FALSE	canonical	3	225	junction_2	13.9124245031395	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTAGCCTGTTGCTTTGTT	-23	True	NA	-1	True	ATTAAA	-16	NA	20508151	20499446	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_20501420_20502068_20502190_20503221_20503310_20507904
H1_mix_00002926	chr1	-	2091	11	FSM	ENSG00000244038.11	ENST00000415136.6	2126	11	35	0	35	0	multi-exon	FALSE	canonical	3	3345	junction_4	199.049767646184	632	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGTCCTGGTTTGCTAA	-8	True	NA	4	True	AATAAA	-44	NA	20661509	20651766	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_20652529_20652620_20652728_20652850_20652972_20653626_20653775_20654222_20654372_20654613_20654708_20655439_20655535_20655675_20655780_20656100_20656188_20660880_20660992_20661196
H1_mix_00002928	chr1	-	3971	15	FSM	ENSG00000117245.13	ENST00000247986.2	3969	15	0	-2	0	0	multi-exon	FALSE	canonical	3	11	junction_3	11.4689020523202	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCCCTTCTCTGACCCTC	-10	True	NA	-20	True	AATAAA	-16	NA	20718017	20664013	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_20664763_20666213_20666332_20670420_20670492_20671937_20672197_20682652_20682885_20684808_20685021_20686045_20686127_20687387_20687945_20690187_20690336_20698378_20698489_20704446_20704900_20709638_20709829_20713453_20713556_20715492_20715640_20717475
H1_mix_00002929	chr1	-	4045	15	FSM	ENSG00000117245.13	ENST00000400463.8	3958	15	-87	0	-77	0	multi-exon	FALSE	canonical	3	32	junction_11	8.06858356939597	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCCCTTCTCTGACCCTC	NA	False	NA	-20	True	AATAAA	-16	NA	20718094	20664013	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_20664763_20666213_20666332_20670420_20670489_20671937_20672197_20682652_20682885_20684808_20685021_20686045_20686127_20687387_20687945_20690187_20690336_20698378_20698489_20704446_20704900_20709638_20709829_20713453_20713556_20715492_20715640_20717475
H1_mix_00002930	chr1	-	3550	10	NNC	ENSG00000189410.12	novel	3898	10	NA	NA	100	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_9	8.4736337621945	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTCTGCTACAGACTTT	-6	True	NA	-7	True	AATAAA	-14	NA	20732178	20719730	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_20721996_20722755_20722916_20723625_20723735_20724082_20724252_20724395_20724636_20725919_20726067_20727000_20727076_20727522_20727604_20727957_20728087_20732003
H1_mix_00002931	chr1	-	524	5	FSM	ENSG00000189410.12	ENST00000519434.1	524	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	15.556349186104	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTCTCAAGATCTACAGCG	1523	False	NA	NA	False	NA	NA	NA	20731175	20727031	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_20727076_20727522_20727604_20727957_20728087_20730745_20730852_20731011
H1_mix_00002946	chr1	-	6238	34	NIC	ENSG00000075151.24	novel	6397	37	NA	NA	0	9	combination_of_known_junctions	FALSE	canonical	3	84	junction_25	46.5924242177884	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTTCTCCTTTGGACAG	-18	True	NA	-22	True	AATAAA	-32	NA	21176897	20806469	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_20807501_20810737_20810885_20813157_20813240_20817391_20817539_20825099_20825199_20827616_20827699_20829146_20829273_20840855_20841029_20849414_20849531_20851257_20851479_20853559_20853678_20854977_20855072_20857402_20857498_20860384_20860518_20862227_20862333_20864475_20864713_20865115_20865263_20879322_20879521_20886200_20886372_20893516_20893637_20895367_20895502_20899696_20899944_20904882_20904972_20941490_20942331_20950002_20950112_20969473_20969597_20973001_20973100_20980333_20980449_20981047_20981228_21002712_21002809_21050865_21050995_21089137_21089214_21176174_21176359_21176721
H1_mix_00002950	chr1	-	6384	32	NIC	ENSG00000075151.24	novel	6528	33	NA	NA	2	5	intron_retention	FALSE	canonical	3	26	junction_1	52.5581388602931	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTGACTTCTCCTTTGG	486	False	NA	-26	True	AATAAA	-28	NA	21176834	20806473	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_20807501_20813157_20813240_20817391_20817539_20825099_20825199_20827616_20827699_20829146_20829273_20840855_20841029_20849414_20849531_20851257_20851479_20853559_20853678_20854977_20855072_20857402_20857498_20860384_20860518_20862227_20862333_20864475_20864713_20865115_20865263_20879322_20879521_20886200_20886372_20893516_20893637_20895367_20895502_20899696_20899944_20904882_20904972_20941490_20942331_20950002_20950109_20969473_20969597_20973001_20973100_20980333_20980449_20981047_20981228_21002712_21002809_21050865_21050995_21089137_21089214_21176174
H1_mix_00002954	chr1	-	5161	18	FSM	ENSG00000117298.16	ENST00000264205.10	2381	18	-92	-2688	-92	1	multi-exon	FALSE	canonical	3	126	junction_11	17.4010300772933	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGTGTCTGGGTGTCTG	8653	False	NA	-3	True	AATAAA	-16	NA	21290349	21217248	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_21220132_21221746_21221843_21225249_21225441_21227158_21227227_21227930_21228042_21233557_21233662_21235849_21235928_21236745_21236845_21238133_21238245_21244988_21245104_21247220_21247364_21255946_21256139_21257524_21257591_21258692_21258840_21260270_21260393_21272698_21272912_21279190_21279333_21290069
H1_mix_00002955	chr1	-	5070	19	FSM	ENSG00000117298.16	ENST00000374893.11	5067	19	0	-3	0	0	multi-exon	TRUE	canonical	3	41	junction_18	31.9405794763331	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGTCTGGGTGTCTGTC	-24	True	NA	-1	True	AATAAA	-18	NA	21290463	21217246	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_21220132_21221746_21221843_21225249_21225441_21227158_21227227_21227930_21228042_21233557_21233662_21235849_21235928_21236745_21236845_21238133_21238245_21244988_21245104_21247220_21247364_21255946_21256139_21257524_21257591_21258692_21258840_21260270_21260393_21272698_21272912_21279190_21279333_21290069_21290157_21290363
H1_mix_00002956	chr1	-	5099	19	FSM	ENSG00000117298.16	ENST00000415912.6	5099	19	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_18	19.9605320446669	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGTCTGGGTGTCTGTC	-9	True	NA	-1	True	AATAAA	-18	NA	21345504	21217246	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_21220132_21221746_21221843_21225249_21225441_21227158_21227227_21227930_21228042_21233557_21233662_21235849_21235928_21236745_21236845_21238133_21238245_21244988_21245104_21247220_21247364_21255946_21256139_21257524_21257591_21258692_21258840_21260270_21260393_21272698_21272912_21279190_21279333_21290069_21290157_21345375
H1_mix_00002959	chr1	-	3321	23	FSM	ENSG00000076864.21	ENST00000374761.6	3318	23	0	-3	0	3	multi-exon	TRUE	canonical	3	43	junction_22	10.654219666133	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTTGGGCCTGGCTTTGT	-25	True	NA	-2	True	AATAAA	-24	NA	21622568	21596217	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_21597265_21597685_21597729_21597960_21598065_21598399_21598503_21599493_21599618_21601683_21601798_21602803_21602914_21606065_21606198_21608212_21608351_21608849_21608937_21609574_21609647_21610119_21610276_21611451_21611582_21611715_21611817_21612025_21612110_21613175_21613230_21613627_21613707_21613985_21614090_21617305_21617492_21617933_21617973_21619024_21619073_21620014_21620051_21622338
H1_mix_00002962	chr1	-	4135	27	FSM	ENSG00000090686.16	ENST00000308271.14	4419	27	0	284	0	-284	multi-exon	FALSE	canonical	3	165	junction_14	34.0286165684432	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTGAAGTACATTTGGAT	8	True	NA	-18	True	AATAAA	-31	NA	21783149	21678581	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_21679440_21680807_21680835_21687190_21687240_21689973_21690100_21695065_21695222_21701497_21701603_21703511_21703619_21704261_21704393_21705726_21705838_21706125_21706188_21706466_21706590_21706743_21706869_21715388_21715458_21721035_21721167_21721649_21721765_21723897_21724096_21728569_21728720_21729703_21729833_21736445_21736626_21747066_21747150_21748137_21748272_21751506_21751616_21752526_21752652_21752991_21753120_21756545_21756703_21757662_21757784_21782823
H1_mix_00002963	chr1	-	3653	27	NIC	ENSG00000090686.16	novel	4419	27	NA	NA	0	0	intron_retention	FALSE	canonical	3	75	junction_14	45.4437684911205	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTAAGTGTGGAAAAGTGT	210	False	NA	-30	True	AATAAA	-21	NA	21782991	21678902	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_21679440_21680807_21680835_21687190_21687240_21689973_21690100_21695065_21695222_21701497_21701603_21703511_21703619_21704261_21704393_21705726_21705838_21706125_21706188_21706466_21706590_21706743_21706869_21715388_21715458_21721035_21721164_21721649_21721765_21723897_21724096_21728569_21728720_21729703_21729833_21736445_21736626_21747066_21747150_21748137_21748272_21751506_21751616_21752526_21752652_21752991_21753120_21756545_21756703_21757662_21757784_21782823
H1_mix_00002964	chr1	-	3811	27	NIC	ENSG00000090686.16	novel	4419	27	NA	NA	0	0	intron_retention	FALSE	canonical	3	51	junction_18	51.6103545640296	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTAAGTGTGGAAAAGTGT	8	True	NA	-30	True	AATAAA	-21	NA	21783149	21678902	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_21679440_21680807_21680835_21687190_21687240_21689973_21690100_21695065_21695222_21701497_21701603_21703511_21703619_21704261_21704393_21705726_21705838_21706125_21706188_21706466_21706590_21706743_21706869_21715388_21715458_21721035_21721167_21721649_21721765_21723897_21724096_21728569_21728720_21729703_21729830_21736445_21736626_21747066_21747150_21748137_21748272_21751506_21751616_21752526_21752652_21752991_21753120_21756545_21756703_21757662_21757784_21782823
H1_mix_00002965	chr1	-	2803	11	FSM	ENSG00000090686.16	ENST00000421625.6	2818	11	15	0	15	0	multi-exon	FALSE	canonical	3	221	junction_9	27	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTACTTGTGGTTTGTCTT	NA	False	NA	-4	True	AATAAA	-14	NA	21783591	21727850	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_21728720_21729703_21729833_21736445_21736626_21747066_21747150_21748137_21748272_21751506_21751616_21752526_21752652_21752991_21753120_21756545_21756703_21757662_21757784_21782823
H1_mix_00002966	chr1	-	3561	11	FSM	ENSG00000142798.20	ENST00000486901.1	3586	11	39	-14	39	13	multi-exon	TRUE	canonical	3	234	junction_10	27.3607382941323	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGATGAGGGCTTCACT	6169	False	NA	0	True	AATAAA	-31	NA	21830674	21822230	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_21823489_21823615_21823720_21824120_21824205_21824305_21824377_21824536_21824616_21824703_21824780_21827862_21827920_21828029_21828153_21828254_21828427_21828834_21829080_21829382
H1_mix_00002968	chr1	-	839	2	FSM	ENSG00000142798.20	ENST00000481644.1	839	2	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGGACTCCCGGGCCACG	NA	False	NA	NA	False	NA	NA	NA	21824266	21823300	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_21823489_21823615
H1_mix_00002971	chr1	-	637	5	FSM	ENSG00000142798.20	ENST00000439717.2	637	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	7.98044484975618	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGACTGTTTCCTCTAG	21	False	NA	NA	False	NA	NA	NA	21896271	21889815	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_21890142_21890426_21890486_21890584_21890695_21895921_21895967_21896174
H1_mix_00002972	chr1	-	3939	5	FSM	ENSG00000162552.15	ENST00000290167.11	3968	5	0	29	0	-29	multi-exon	FALSE	canonical	3	7	junction_3	2.48746859276655	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATGCACGATAAAACAATT	-2	True	NA	-35	True	NA	NA	NA	22143097	22117341	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_22120518_22121210_22121354_22121444_22121577_22129615_22129852_22142845
H1_mix_00002973	chr1	-	614	2	FSM	ENSG00000162552.15	ENST00000415567.1	680	2	0	66	0	-66	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCATCAAACTCCTCCCTT	NA	False	NA	NA	False	NA	NA	NA	22129851	22127103	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_22127482_22129615
H1_mix_00002974	chr1	-	8421	4	ISM	ENSG00000169641.14	ENST00000302291.8	8898	5	8950	-7	-13	7	3prime_fragment	FALSE	canonical	3	84	junction_3	25.381533094402	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTTTCAGCTCTTTTG	-3	True	NA	-6	True	AATAAA	-27	NA	23168858	23084022	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_23089054_23091189_23094381_23109021_23109128_23168765
H1_mix_00002975	chr1	-	8488	5	NIC	ENSG00000169641.14	novel	8898	5	NA	NA	-14	7	combination_of_known_junctions	FALSE	canonical	3	24	junction_4	51.2567068782223	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTTTCAGCTCTTTTG	-4	True	NA	-6	True	AATAAA	-27	NA	23168859	23084022	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_23089054_23091189_23094381_23109021_23109128_23109584_23109651_23168765
H1_mix_00002977	chr1	-	2913	3	NNC	ENSG00000179546.5	novel	3319	2	NA	NA	36	1712	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0.5	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTAGAGAAGGTTTCATAA	31	False	NA	-4	True	AATAAA	-25	NA	23217466	23190182	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_23190514_23192484_23194891_23217290
H1_mix_00002979	chr1	-	3319	2	FSM	ENSG00000179546.5	ENST00000374619.2	3319	2	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGTCTTTGGGTGATTT	-5	True	NA	-2	True	AATAAA	-22	NA	23217502	23191894	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_23195002_23217290
H1_mix_00002980	chr1	-	7052	1	FSM	ENSG00000261326.4	ENST00000566551.1	5444	1	-804	-804	-68	802	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATTTCACATACCATAA	NA	False	NA	NA	False	TTTAAA	-12	NA	23287556	23280504	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_23280500_23287600
H1_mix_00002981	chr1	-	5301	2	FSM	ENSG00000261326.4	ENST00000655082.1	5301	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTTTTTTTGTCTTATTT	NA	False	NA	-1	True	AATAAA	-17	NA	23287488	23281306	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_23283114_23283994
H1_mix_00002982	chr1	-	7784	11	FSM	ENSG00000125944.21	ENST00000302271.11	7751	11	-33	0	0	0	multi-exon	FALSE	canonical	3	532	junction_10	428.953377419971	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTTGGTGATTTTGG	333	False	NA	0	True	AATAAA	-18	NA	23344317	23304687	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_23311067_23311200_23311323_23313552_23313703_23318482_23318689_23321527_23321664_23323555_23323733_23333517_23333632_23337753_23337862_23338489_23338609_23340851_23341018_23344210
H1_mix_00002984	chr1	-	2497	10	NIC	ENSG00000125944.21	novel	2694	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	1293	junction_9	207.886780677	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCTATTTCAAATTCAAT	-12	True	NA	-19	True	AATAAA	-23	NA	23344294	23309785	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_23311067_23311200_23311323_23313552_23313703_23318482_23318689_23321527_23321664_23323555_23323733_23333517_23333632_23337753_23337862_23338489_23338609_23344210
H1_mix_00002986	chr1	-	2694	11	FSM	ENSG00000125944.21	ENST00000374612.5	2694	11	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_10	460.752688543431	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCTATTTCAAATTCAAT	-1	True	NA	-19	True	AATAAA	-23	NA	23344322	23309785	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_23311067_23311200_23311323_23313552_23313703_23318482_23318689_23321527_23321664_23323555_23323733_23333517_23333632_23337753_23337862_23338489_23338609_23340851_23341021_23344210
H1_mix_00002987	chr1	-	1837	9	FSM	ENSG00000125944.21	ENST00000606561.5	1837	9	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_6	533.549420742821	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCTGAAGAAATCACTATT	-13	True	NA	NA	False	NA	NA	NA	23344295	23310332	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_23311067_23311200_23311323_23313552_23313703_23318482_23318689_23321527_23321664_23323555_23323733_23337753_23337862_23338489_23338609_23344210
H1_mix_00002989	chr1	-	4051	25	FSM	ENSG00000088280.20	ENST00000336689.8	4051	25	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_8	26.5295629125949	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGGTTTCATTTATGT	27	True	NA	-7	True	AATAAA	-18	NA	23484179	23428562	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_23429931_23431034_23431126_23431695_23431919_23433076_23433273_23433424_23433533_23433625_23433694_23434253_23434370_23434532_23434619_23435850_23436029_23436559_23436655_23436910_23437045_23437129_23437321_23437423_23437473_23438746_23438835_23439160_23439231_23441101_23441212_23441386_23441474_23441654_23441731_23442185_23442272_23442500_23442613_23451478_23451529_23452696_23452772_23455880_23456027_23456121_23456195_23484004
H1_mix_00002991	chr1	-	5204	7	FSM	ENSG00000007968.7	ENST00000361729.3	5196	7	0	-8	0	8	multi-exon	FALSE	canonical	3	15	junction_5	3.8151743807532	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTGTCTTTGTCGTGCT	-10	True	NA	-8	True	ATTAAA	-21	NA	23531233	23506429	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_23510149_23516334_23516528_23519015_23519131_23520912_23521072_23521836_23522057_23524382_23524489_23530541
H1_mix_00002992	chr1	-	950	3	FSM	ENSG00000117318.9	ENST00000374561.6	950	3	0	0	0	0	multi-exon	FALSE	canonical	3	4024	junction_1	56.5	532	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATGACACCCGTCTCCA	-1	True	NA	-19	True	AATAAA	-22	NA	23559501	23557925	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_23558416_23558934_23559020_23559126
H1_mix_00002993	chr1	-	1074	4	FSM	ENSG00000236810.7	ENST00000427796.6	1112	4	38	0	2	0	multi-exon	FALSE	canonical	3	19	junction_2	7.40870359029762	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGTGGGGAGTTCTGTGC	-3	True	NA	NA	False	NA	NA	NA	23778287	23760381	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_23761152_23772110_23772167_23772267_23772427_23778198
H1_mix_00002994	chr1	-	940	4	FSM	ENSG00000236810.7	ENST00000664563.2	970	4	28	2	-6	-2	multi-exon	FALSE	canonical	3	23	junction_2	5.55777733351102	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAAGTTGCCTTCAGGGC	-12	True	NA	-3	True	ATTAAA	-18	NA	23778296	23760520	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_23761152_23772110_23772167_23772271_23772427_23778198
H1_mix_00002996	chr1	-	1388	11	NIC	ENSG00000117308.15	novel	1516	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	97.5356345137509	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGTTCTCACAGATGGTC	2	True	NA	-6	True	AATAAA	-22	NA	23800752	23795598	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_23796008_23796150_23796266_23796508_23796587_23796696_23796783_23796875_23796943_23797033_23797148_23797694_23797872_23798116_23798231_23798614_23798731_23799365_23799437_23800711
H1_mix_00002997	chr1	-	1378	11	NIC	ENSG00000117308.15	novel	1516	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	122.853937665831	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGGCAGGTTCTCACAGA	2	True	NA	-11	True	AATAAA	-17	NA	23800752	23795603	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_23796008_23796150_23796266_23796508_23796587_23796696_23796783_23796875_23796943_23797033_23797148_23797694_23797872_23798116_23798226_23798614_23798731_23799365_23799437_23800711
H1_mix_00002998	chr1	-	1516	12	FSM	ENSG00000117308.15	ENST00000617979.5	1516	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	93.110260772683	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGTTCTCACAGATGGTC	0	True	NA	-6	True	AATAAA	-22	NA	23800754	23795598	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_23796008_23796150_23796266_23796508_23796587_23796696_23796783_23796875_23796943_23797033_23797148_23797694_23797872_23798116_23798231_23798614_23798731_23798886_23799013_23799365_23799437_23800711
H1_mix_00002999	chr1	-	1563	11	FSM	ENSG00000117308.15	ENST00000459934.5	1563	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	97.6477854331577	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGCTCTGAAAGAGCTT	1	True	NA	-68	True	NA	NA	NA	23800753	23795660	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_23796008_23796150_23796266_23796508_23796783_23796875_23796943_23797033_23797148_23797694_23797872_23798116_23798231_23798614_23798731_23798886_23799013_23799365_23799437_23800711
H1_mix_00003009	chr1	-	1364	7	FSM	ENSG00000117305.15	ENST00000436439.6	1354	7	0	-10	0	8	multi-exon	FALSE	canonical	3	52	junction_3	77.8897012162427	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGGTTGTGCAGCTGTGTG	3	True	NA	-2	True	ATTAAA	-29	NA	23825428	23801876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_23802565_23804399_23804526_23808134_23808324_23816674_23816771_23817475_23817584_23820509_23820594_23825355
H1_mix_00003010	chr1	-	2202	10	FSM	ENSG00000117305.15	ENST00000374487.6	2151	10	-41	-10	-41	8	multi-exon	FALSE	canonical	2	3	junction_9	100.166528008778	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGGTTGTGCAGCTGTGTG	7449	False	NA	-2	True	ATTAAA	-29	NA	23838661	23801876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_23802565_23804399_23804526_23808134_23808324_23810735_23810800_23814189_23814339_23816674_23816771_23817475_23817584_23820509_23820594_23826083_23826184_23838063
H1_mix_00003011	chr1	-	463	2	FSM	ENSG00000117305.15	ENST00000498698.1	463	2	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCACTTCTTTAGAGAAAT	7940	False	NA	NA	False	AATAAA	-18	NA	23817533	23816365	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_23816771_23817475
H1_mix_00003012	chr1	-	2045	8	FSM	ENSG00000179163.12	ENST00000374479.4	2043	8	0	-2	0	2	multi-exon	FALSE	canonical	3	92	junction_7	7.92824967172092	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTATAGCTTTCTTTTCCT	31	True	NA	5	True	AATAAA	-38	NA	23868290	23845074	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_23845856_23846073_23846174_23848648_23848840_23854359_23854561_23859797_23859904_23863133_23863272_23865490_23865626_23867897
H1_mix_00003013	chr1	-	2952	7	NNC	ENSG00000188529.15	novel	2917	6	NA	NA	0	33961	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	629.052307487665	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGTATGGTGGCTCAAGC	-3	True	NA	NA	False	AAAAAG	-1	NA	23980331	23930385	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_23930414_23969079_23971440_23971572_23971624_23971849_23972013_23974973_23975076_23978710_23978818_23980190
H1_mix_00003014	chr1	-	2954	7	NNC	ENSG00000188529.15	novel	7656	6	NA	NA	0	33961	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	625.904612008358	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGTATGGTGGCTCAAGC	-3	True	NA	NA	False	AAAAAG	-1	NA	23980331	23930385	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_23930413_23969079_23971440_23971572_23971627_23971849_23972013_23974973_23975076_23978710_23978818_23980190
H1_mix_00003017	chr1	-	3442	6	NNC	ENSG00000188529.15	novel	3487	6	NA	NA	0	15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	563.645278521873	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTTGCTCTTAGATTTG	90	False	NA	-25	True	AATAAA	-39	NA	23980271	23964788	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_23967724_23971572_23971627_23971849_23972013_23974973_23975076_23978710_23978818_23980190
H1_mix_00003018	chr1	-	6118	7	NIC	ENSG00000188529.15	novel	2839	7	NA	NA	0	133	combination_of_known_junctions	FALSE	canonical	3	63	junction_4	592.151280408046	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGGAATTTAAGCTTTT	-3	True	NA	NA	False	TATAAA	-17	NA	23980331	23966311	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_23971440_23971572_23971624_23971849_23972013_23974973_23975081_23977910_23978274_23978652_23978818_23980190
H1_mix_00003020	chr1	-	3957	4	FSM	ENSG00000188529.15	ENST00000485841.5	3957	4	0	0	0	0	multi-exon	FALSE	canonical	3	750	junction_1	270.260368287077	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAACCGGA	2709	False	NA	NA	False	NA	NA	NA	23977652	23970378	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_23971440_23971572_23971627_23971849_23972013_23974973
H1_mix_00003022	chr1	-	500	3	FSM	ENSG00000188529.15	ENST00000473754.1	500	3	0	0	0	0	multi-exon	FALSE	canonical	3	1081	junction_1	165.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAGAAATGAAGGCTAAA	5309	False	NA	NA	False	NA	NA	NA	23975052	23971368	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_23971627_23971849_23972013_23974973
H1_mix_00003024	chr1	-	4578	7	FSM	ENSG00000185436.12	ENST00000327535.6	4566	7	0	-12	0	12	multi-exon	FALSE	canonical	3	29	junction_1	27.633011658763	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAAAGCGTATGCTCTTA	-19	True	NA	-3	True	AATAAA	-36	NA	24187289	24154155	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_24157892_24159051_24159183_24159473_24159634_24161541_24161685_24169416_24169602_24180730_24180855_24187190
H1_mix_00003026	chr1	-	2968	1	NIC	ENSG00000185436.12	novel	4566	7	NA	NA	26801	-350	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATTTGGCTGAGAAGGGG	NA	False	NA	NA	False	NA	NA	NA	24160447	24157479	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_24157500_24160400
H1_mix_00003028	chr1	-	687	4	FSM	ENSG00000185436.12	ENST00000374418.3	674	4	0	-13	0	13	multi-exon	FALSE	canonical	3	90	junction_3	4.32049379893857	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCTGCTTGCCAAGTCA	22	True	NA	2	True	AATAAA	-28	NA	24187248	24161364	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_24161685_24169416_24169602_24180730_24180855_24187190
H1_mix_00003029	chr1	-	2726	9	FSM	ENSG00000001460.18	ENST00000337248.9	2726	9	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	16.814707104199	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGGGTACCCCTTAAT	-27	True	NA	-1	True	ATTAAA	-22	NA	24413782	24356998	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_24358620_24360850_24361042_24369673_24369840_24373701_24373811_24379652_24379824_24383901_24384004_24391560_24391680_24401318_24401457_24413673
H1_mix_00003030	chr1	-	811	4	FSM	ENSG00000001460.18	ENST00000438866.1	811	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	34.1207007873845	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTAGGATTTTGCTTTCAG	NA	False	NA	NA	False	NA	NA	NA	24379823	24369042	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_24369408_24369673_24369840_24373701_24373811_24379652
H1_mix_00003031	chr1	-	655	3	ISM	ENSG00000001460.18	ENST00000337248.9	2726	9	57	34216	0	-12	5prime_fragment	FALSE	canonical	3	102	junction_1	6	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTTCCCCATCCTTGTG	30	True	NA	NA	False	ATTAAA	-4	NA	24413725	24391214	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_24391680_24401318_24401457_24413673
H1_mix_00003032	chr1	-	4268	5	FSM	ENSG00000020633.19	ENST00000308873.11	4267	5	0	-1	0	1	multi-exon	FALSE	canonical	1	2	junction_1	0.866025403784439	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTGCCCGGTTTCTAGG	-2	True	NA	2	True	AATATA	-23	NA	24930276	24899509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_24902667_24907258_24907418_24919239_24919345_24927573_24927731_24929586
H1_mix_00003034	chr1	-	926	6	FSM	ENSG00000117614.10	ENST00000354361.3	926	6	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_4	258.087272061216	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCATTTTGGGCTTAAGA	-6	True	NA	18	True	TTTAAA	-23	NA	25232486	25222964	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_25223432_25225001_25225101_25227441_25227533_25228117_25228236_25232103_25232212_25232443
H1_mix_00003035	chr1	-	913	3	FSM	ENSG00000117616.18	ENST00000569495.5	901	3	0	-12	0	12	multi-exon	FALSE	canonical	3	6	junction_1	58	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATAACCTAATGGATC	3383	False	NA	-7	True	AATAAA	-32	NA	25244105	25242236	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_25242427_25242538_25242706_25243549
H1_mix_00003036	chr1	-	2278	5	NIC	ENSG00000117616.18	novel	1425	5	NA	NA	4	0	intron_retention	FALSE	canonical	3	42	junction_2	30.0697106736995	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTATTGTATATATATA	46	False	NA	-19	True	AATAAA	-20	NA	25247442	25242248	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_25242706_25243549_25244499_25245149_25245302_25246443_25247030_25247308
H1_mix_00003037	chr1	-	2953	4	FSM	ENSG00000117616.18	ENST00000498238.1	2941	4	0	-12	0	12	multi-exon	FALSE	canonical	3	90	junction_3	13.0724477007517	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATAACCTAATGGATC	0	True	NA	-7	True	AATAAA	-32	NA	25247454	25242236	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_25242706_25243549_25245302_25246443_25247030_25247308
H1_mix_00003040	chr1	-	2161	3	FSM	ENSG00000127423.11	ENST00000374298.4	2161	3	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_1	7	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTTGTGATAATTGGTAA	-49	True	NA	-12	True	AATAAA	-14	NA	25859457	25834005	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_25835847_25837412_25837555_25859279
H1_mix_00003041	chr1	-	2685	3	FSM	ENSG00000182749.6	ENST00000675840.1	2685	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTTGTTTTTTGTCTCC	-3	True	NA	-2	True	AATAAA	-19	NA	25875708	25861483	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_25863862_25870608_25870695_25875487
H1_mix_00003042	chr1	-	1726	2	FSM	ENSG00000117632.23	ENST00000513116.1	1783	2	74	-17	74	17	multi-exon	FALSE	canonical	1	1	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAATTTTTATATTATTAT	9135	False	NA	NA	False	AATAAA	-39	NA	25892533	25884163	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_25885870_25892513
H1_mix_00003043	chr1	-	1454	5	FSM	ENSG00000117632.23	ENST00000455785.7	1443	5	0	-11	0	11	multi-exon	FALSE	canonical	3	2965	junction_4	446.224719171854	1110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACTAAAGGGAACCTTAAT	0	True	NA	-32	True	AATAAA	-34	NA	25906419	25900104	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_25901088_25901490_25901683_25903640_25903814_25904663_25904739_25906388
H1_mix_00003044	chr1	-	1725	5	FSM	ENSG00000117632.23	ENST00000399728.5	1712	5	0	-13	0	11	multi-exon	FALSE	canonical	3	250	junction_4	1576.91904912713	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACTAAAGGGAACCTTAAT	852	False	NA	-32	True	AATAAA	-34	NA	25906153	25900104	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_25901088_25901490_25901683_25903640_25903814_25904663_25904739_25905851
H1_mix_00003045	chr1	-	2954	4	FSM	ENSG00000117632.23	ENST00000465604.1	2947	4	0	-7	0	7	multi-exon	FALSE	canonical	3	2965	junction_3	513.595387656687	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTTCTTTTGAGTTAGG	2	True	NA	-8	True	AATAAA	-24	NA	25906417	25900560	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_25901088_25901490_25903814_25904663_25904739_25906388
H1_mix_00003047	chr1	-	3487	11	FSM	ENSG00000158006.14	ENST00000374282.8	3487	11	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	7.74854825112421	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTTGTTGGCTTGCTCTT	7	True	NA	-6	True	AAAAAG	-16	NA	25998063	25959766	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_25962084_25972557_25972713_25974479_25974651_25976681_25976774_25982363_25982478_25983945_25984088_25984459_25984529_25988230_25988328_25989447_25989602_25990726_25990864_25998024
H1_mix_00003048	chr1	-	1313	12	FSM	ENSG00000158062.21	ENST00000374223.5	1312	12	0	-1	0	0	multi-exon	FALSE	canonical	3	15	junction_11	62.526291990511	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGCTCCGCCAGGCTCT	16	True	NA	NA	False	AATAAA	-18	NA	26306620	26282280	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26284483_26285463_26285542_26285822_26286038_26296918_26296996_26297426_26297482_26297961_26298063_26301693_26301723_26306591
H1_mix_00003049	chr1	-	1558	14	FSM	ENSG00000158062.21	ENST00000357089.8	1555	14	0	-3	0	0	multi-exon	FALSE	canonical	3	50	junction_13	46.1838364101785	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGCTCCGCCAGGCTCT	4	True	NA	NA	False	AATAAA	-18	NA	26306632	26282280	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26284483_26285463_26285542_26285822_26286038_26294204_26294332_26296918_26296996_26297426_26297482_26297961_26298063_26301693_26301723_26302812_26302919_26306591
H1_mix_00003051	chr1	-	2543	13	FSM	ENSG00000158062.21	ENST00000475591.5	2542	13	0	-1	0	0	multi-exon	FALSE	canonical	3	50	junction_12	47.9049985793642	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGCTCCGCCAGGCTCT	0	True	NA	NA	False	AATAAA	-18	NA	26306636	26282280	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26285542_26285822_26286038_26294204_26294332_26296918_26296996_26297426_26297482_26297961_26298063_26301693_26301723_26302812_26302919_26306591
H1_mix_00003052	chr1	-	2646	14	FSM	ENSG00000158062.21	ENST00000472155.5	2646	14	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_11	55.8762368646444	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGCTCCGCCAGGCTCT	-4	True	NA	NA	False	AATAAA	-18	NA	26306640	26282280	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26285542_26285822_26286038_26294204_26294332_26296918_26296996_26297426_26297482_26297961_26298063_26300925_26301025_26301693_26301723_26302812_26302919_26306591
H1_mix_00003053	chr1	-	1922	15	NIC	ENSG00000158062.21	novel	1660	15	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_14	59.7688148158368	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCTGCTCCGCCAGGCTC	470	False	NA	NA	False	AATAAA	-17	NA	26306594	26282281	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26284483_26285463_26285542_26285822_26286038_26294204_26294332_26296918_26296996_26297426_26297482_26297961_26298063_26300925_26301025_26301693_26301723_26302812_26302919_26306287
H1_mix_00003054	chr1	-	1177	9	NIC	ENSG00000158062.21	novel	1660	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_8	51.5398814026575	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCTGCTCCGCCAGGCTC	16	True	NA	NA	False	AATAAA	-17	NA	26306620	26282281	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26284483_26285463_26285542_26285822_26286038_26294204_26294332_26306591
H1_mix_00003059	chr1	-	1035	7	NIC	ENSG00000176092.17	novel	5239	20	NA	NA	-96	0	combination_of_known_splicesites	FALSE	canonical	3	53	junction_6	23.8146780135464	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCAGGTACCCTTGTC	NA	False	NA	-20	True	NA	NA	NA	26336479	26321876	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_26322057_26322163_26322324_26324151_26324311_26328208_26328333_26328733_26328874_26331488_26331619_26336337
H1_mix_00003060	chr1	-	6100	22	FSM	ENSG00000176092.17	ENST00000475866.3	6259	22	0	159	0	8	multi-exon	TRUE	canonical	3	9	junction_14	38.7542990081098	1113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGCACCTTGATATTTC	21	False	NA	0	True	NA	NA	NA	26360080	26321856	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_26322057_26322163_26322324_26324151_26324311_26328208_26328333_26328733_26328874_26331488_26331619_26336094_26336208_26336337_26336371_26336605_26336733_26336840_26336981_26337252_26337380_26337537_26337675_26338011_26338048_26338350_26338478_26339289_26339430_26342753_26342884_26343046_26343160_26343245_26343294_26343744_26346713_26354045_26354786_26356458_26356523_26359936
H1_mix_00003064	chr1	-	4665	5	FSM	ENSG00000142751.15	ENST00000374135.9	4665	5	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	20.1494416796099	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTGTATTCTCTTTT	-6	True	NA	0	True	AATAAA	-18	NA	26890283	26876131	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_26879750_26884159_26884291_26885972_26886134_26888968_26889126_26889685
H1_mix_00003066	chr1	-	2145	7	FSM	ENSG00000198746.13	ENST00000361720.10	2125	7	0	-20	0	20	multi-exon	FALSE	canonical	3	91	junction_5	15.7735714267745	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAGTCTGAAGGTTAGAGAA	-11	True	NA	4	True	AATAAA	-37	NA	26900467	26890467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_26891227_26892410_26892539_26892669_26892792_26893388_26893449_26894235_26894411_26897300_26897726_26899991
H1_mix_00003068	chr1	-	1963	5	NNC	ENSG00000175707.10	novel	1855	4	NA	NA	0	6	at_least_one_novel_splicesite	TRUE	canonical	3	32	junction_4	130.110529935129	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCCTGCTTTCTTGGCTG	-24	True	NA	-9	True	NA	NA	NA	26960468	26949555	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_26950152_26950681_26950757_26951341_26952413_26953845_26953948_26960349
H1_mix_00003070	chr1	-	2382	2	FSM	ENSG00000158246.8	ENST00000289166.6	2382	2	0	0	0	0	multi-exon	TRUE	canonical	3	1162	junction_1	0	780	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTAGTGCCATGCTTCCTC	5	True	NA	-12	True	AATAAA	-17	NA	27012850	27005019	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_27006958_27012406
H1_mix_00003071	chr1	-	668	2	FSM	ENSG00000090020.11	ENST00000490329.1	660	2	0	-8	0	1	multi-exon	FALSE	canonical	1	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGGGCTGCTTTCTGGGG	NA	False	NA	NA	False	AATAAA	-23	NA	27099682	27098807	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_27099005_27099211
H1_mix_00003073	chr1	-	4738	12	FSM	ENSG00000090020.11	ENST00000263980.8	4737	12	0	-1	0	1	multi-exon	FALSE	canonical	3	28	junction_9	8.57441899821934	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGGGCTGCTTTCTGGGG	1	True	NA	NA	False	AATAAA	-23	NA	27155125	27098807	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_27100645_27101202_27101276_27101724_27101827_27102015_27102131_27102384_27102559_27102672_27102744_27103222_27103313_27105884_27106088_27107647_27107866_27109526_27109778_27113825_27114287_27153982
H1_mix_00003074	chr1	-	2178	5	FSM	ENSG00000090020.11	ENST00000374086.3	2183	5	0	5	0	-5	multi-exon	FALSE	canonical	3	28	junction_2	7.76208734813001	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGATGCATACCTGTAAT	890	False	NA	NA	False	AATACA	-14	NA	27154598	27105455	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_27106088_27107647_27107866_27109526_27109778_27113825_27114287_27153982
H1_mix_00003077	chr1	-	4799	28	FSM	ENSG00000142733.17	ENST00000374040.7	4309	28	-113	-377	-10	375	multi-exon	TRUE	canonical	3	4	junction_26	9.61836948500465	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATGAAA	-20	True	NA	NA	False	NA	NA	NA	27366971	27354808	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_27355470_27355668_27355746_27356025_27356100_27356387_27356501_27356589_27356750_27357008_27357115_27357399_27357577_27357710_27357877_27358180_27358320_27358418_27358612_27358708_27358867_27359416_27359523_27359857_27359995_27360240_27360369_27360704_27360839_27360920_27361009_27361156_27361253_27361345_27361396_27361519_27361628_27361704_27361868_27362090_27362251_27362640_27362754_27362850_27363022_27363441_27363549_27363916_27364086_27364203_27364395_27364772_27364913_27366257
H1_mix_00003078	chr1	-	4439	29	FSM	ENSG00000142733.17	ENST00000357582.3	4438	29	0	-1	0	1	multi-exon	TRUE	canonical	3	15	junction_27	8.91999588175983	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCCTGGCAATTTTGG	-10	True	NA	-5	True	ATTAAA	-17	NA	27366961	27355182	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_27355470_27355668_27355746_27356025_27356100_27356387_27356501_27356589_27356750_27357008_27357115_27357399_27357577_27357710_27357877_27358180_27358320_27358418_27358612_27358708_27358867_27359416_27359523_27359857_27359995_27360240_27360369_27360704_27360839_27360920_27361009_27361156_27361253_27361345_27361396_27361519_27361628_27361704_27361868_27362090_27362251_27362640_27362754_27362850_27363022_27363441_27363549_27363916_27364086_27364203_27364395_27364660_27364685_27364772_27364913_27366257
H1_mix_00003080	chr1	-	1462	5	FSM	ENSG00000174950.11	ENST00000374027.7	1457	5	0	-5	0	5	multi-exon	FALSE	canonical	1	1	junction_1	3.56195171219375	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTGTGTCTTGGGCTGT	29	False	NA	1	True	AATAAA	-22	NA	27383303	27379170	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_27380196_27381779_27381825_27382327_27382400_27382499_27382668_27383151
H1_mix_00003081	chr1	-	5681	9	FSM	ENSG00000158195.11	ENST00000618852.5	5681	9	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_1	42.537483470464	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACCTCTGGTGTTTGTGG	-14	True	NA	-6	True	GATAAA	-18	NA	27490167	27404229	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_27408347_27409691_27410207_27412571_27412728_27414832_27414964_27415984_27416103_27418268_27418423_27418953_27419089_27428760_27428934_27489985
H1_mix_00003083	chr1	-	6302	7	FSM	ENSG00000126705.15	ENST00000374011.6	6438	7	136	0	-17	0	multi-exon	FALSE	canonical	2	2	junction_4	11.9826263120125	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAATGAAAAAAAGC	9407	False	NA	-59	True	NA	NA	NA	27603496	27534302	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_27534917_27547260_27552190_27552891_27552930_27553073_27553291_27558304_27558531_27558705_27558884_27603396
H1_mix_00003084	chr1	-	812	5	FSM	ENSG00000126709.16	ENST00000361157.11	812	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	3.26917420765551	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTCCTGCTGTCAATCA	-2	True	NA	-15	True	AATAAA	-17	NA	27672192	27666063	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_27666476_27668225_27668376_27668457_27668536_27669244_27669347_27672122
H1_mix_00003085	chr1	-	830	5	FSM	ENSG00000126709.16	ENST00000362020.4	828	5	0	-2	0	0	multi-exon	FALSE	canonical	1	2	junction_3	10.4731800328267	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTCCTGCTGTCAATCA	-8	True	NA	-15	True	AATAAA	-17	NA	27672198	27666063	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_27666476_27668225_27668376_27668457_27668536_27669232_27669347_27672122
H1_mix_00003086	chr1	-	1585	9	FSM	ENSG00000117748.10	ENST00000373912.8	1584	9	0	-1	0	1	multi-exon	FALSE	canonical	3	734	junction_4	53.4297143451095	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGTTTTTCTTTCTGAGC	-8	True	NA	1	True	AATAAA	-30	NA	27914575	27891522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_27892248_27894011_27894107_27894289_27894398_27897004_27897122_27897632_27897708_27906927_27907042_27907180_27907283_27914062_27914170_27914433
H1_mix_00003088	chr1	-	5889	17	FSM	ENSG00000158161.16	ENST00000540618.5	5885	17	0	-4	0	1	multi-exon	FALSE	canonical	3	44	junction_1	14.4448033475711	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTCCTGTGTCTTTTCT	-27	True	NA	-4	True	AATAAA	-18	NA	28088637	27970342	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_27974547_27978373_27978475_27988534_27988657_27989696_27989812_27993399_27993561_27997319_27997379_27999959_28000050_28004335_28004420_28010946_28011087_28013110_28013295_28017153_28017240_28035543_28035681_28038838_28038906_28042570_28042651_28048382_28048427_28057993_28058095_28088523
H1_mix_00003089	chr1	-	6001	18	FSM	ENSG00000158161.16	ENST00000373871.8	5999	18	0	-2	0	2	multi-exon	FALSE	canonical	3	20	junction_11	20.3887817719777	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTCCTGTGTCTTTTCTG	0	True	NA	-3	True	AATAAA	-19	NA	28088610	27970341	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_27974547_27978373_27978475_27988534_27988657_27989696_27989812_27993399_27993561_27997319_27997379_27999959_28000050_28004335_28004420_28010946_28011087_28013110_28013295_28017153_28017240_28027788_28027927_28035543_28035681_28038838_28038906_28042570_28042651_28048382_28048427_28057993_28058095_28088523
H1_mix_00003091	chr1	-	1817	17	FSM	ENSG00000158161.16	ENST00000471498.5	1806	17	0	-11	0	5	multi-exon	FALSE	canonical	2	5	junction_4	28.0417517953141	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTCTAGCCCCTCTTGT	13	True	NA	-8	True	AATAAA	-25	NA	28088597	27988467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_27988657_27989696_27989812_27993399_27993561_27997319_27997379_27998283_27998352_27999959_28000050_28004335_28004420_28010946_28011087_28013110_28013295_28017153_28017240_28027788_28027927_28035543_28035681_28038838_28038906_28042570_28042651_28048382_28048427_28057993_28058095_28088523
H1_mix_00003092	chr1	-	568	2	Genic_Genomic	ENSG00000228589.3	novel	681	1	NA	NA	0	123	multi-exon	FALSE	canonical	3	83	junction_1	0	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATTTTAGTCTATTCTG	15	False	NA	NA	False	AAAAAG	-15	NA	28096422	28095618	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_-_28095989_28096224
H1_mix_00003093	chr1	-	3646	10	Fusion	ENSG00000126698.11_ENSG00000169403.12	novel	1600	10	NA	NA	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	867.026079320698	290	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCACTTTTAAAAACTTACA	21	True	NA	-9	True	AATAAA	-20	NA	28233004	28147165	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_-_28149353_28200556_28201371_28203746_28203823_28205257_28205350_28208341_28208414_28209971_28210067_28210570_28210638_28214939_28214997_28228921_28229024_28232920
H1_mix_00003094	chr1	-	1765	9	FSM	ENSG00000126698.11	ENST00000263697.6	1763	9	9	-11	0	11	multi-exon	FALSE	canonical	3	2334	junction_2	229.588218338834	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTCTATGCTTAAATGTC	5	True	NA	-2	True	ATTAAA	-29	NA	28233020	28200266	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_28201371_28203746_28203823_28205257_28205350_28208341_28208414_28209971_28210067_28210570_28210638_28214939_28214997_28228921_28229024_28232920
H1_mix_00003095	chr1	-	1898	10	FSM	ENSG00000126698.11	ENST00000489277.5	1600	10	-17	-281	-13	0	multi-exon	FALSE	canonical	3	114	junction_8	1079.58967971318	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTCCAGCTCACAGTCTAT	-17	True	NA	-13	True	ATTAAA	-18	NA	28233042	28200277	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_28201371_28203746_28203823_28205257_28205350_28208341_28208414_28209971_28210067_28210570_28210638_28214939_28214997_28228921_28229024_28230130_28230253_28232920
H1_mix_00003096	chr1	-	1265	1	FSM	ENSG00000270605.1	ENST00000604716.1	1945	1	680	0	680	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGTTTCTTGAACTTCA	6425	False	NA	NA	False	AATAAA	-18	NA	28240773	28239508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_28239500_28240800
H1_mix_00003097	chr1	-	525	6	FSM	ENSG00000197989.15	ENST00000475441.6	524	6	0	-1	0	0	multi-exon	FALSE	canonical	2	11	junction_4	27.0333127825651	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTTTGTATTTTTT	246	False	NA	NA	False	AATAAA	-28	NA	28581623	28578537	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_28578681_28579532_28579588_28579911_28579982_28580559_28580647_28581093_28581230_28581589
H1_mix_00003099	chr1	-	1082	5	FSM	ENSG00000197989.15	ENST00000461832.2	1082	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	20.7906228862918	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTTTGTATTTTTT	-4	True	NA	NA	False	AATAAA	-28	NA	28581873	28578537	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_28578681_28579532_28579982_28580559_28580647_28581110_28581230_28581589
H1_mix_00003100	chr1	-	1104	5	FSM	ENSG00000197989.15	ENST00000470977.6	1104	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	30.1413337462031	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTTTGTATTTTTT	-9	True	NA	NA	False	AATAAA	-28	NA	28581878	28578537	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_28578681_28579532_28579982_28580559_28580647_28581093_28581230_28581589
H1_mix_00003101	chr1	-	1788	6	FSM	ENSG00000197989.15	ENST00000648127.1	1871	6	83	0	80	0	multi-exon	FALSE	canonical	3	41	junction_4	19.2561678430575	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTTTGTATTTTTT	NA	False	NA	NA	False	AATAAA	-28	NA	28582903	28578537	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_28578681_28579532_28579588_28579911_28579982_28580559_28580647_28581110_28581230_28581589
H1_mix_00003102	chr1	-	1365	6	FSM	ENSG00000120656.14	ENST00000263974.4	1359	6	0	-6	0	1	multi-exon	FALSE	canonical	3	19	junction_5	194.431067476368	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGGTACCTTTGAAATCC	5265	False	NA	-2	True	AATAAA	-19	NA	28643005	28603094	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_28603575_28605371_28605461_28613246_28613362_28617952_28618031_28621913_28622166_28642654
H1_mix_00003108	chr1	-	2272	5	FSM	ENSG00000116350.18	ENST00000466448.4	1264	5	-80	-928	-62	0	multi-exon	FALSE	canonical	3	107	junction_1	235.644329445883	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATGGTGTTTGAATTGA	0	True	NA	-14	True	AATAAA	-22	NA	29181962	29147742	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_29149227_29154695_29154911_29159373_29159487_29160374_29160518_29181645
H1_mix_00003109	chr1	-	516	3	FSM	ENSG00000116350.18	ENST00000497015.5	516	3	0	0	0	0	multi-exon	FALSE	canonical	3	640	junction_2	16	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACTGTTGATGTCTTTTG	NA	False	NA	NA	False	NA	NA	NA	29160563	29154696	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_29154911_29159373_29159487_29160374
H1_mix_00003110	chr1	-	2353	10	FSM	ENSG00000116353.16	ENST00000263702.11	2515	10	0	162	0	54	multi-exon	FALSE	canonical	3	175	junction_9	24.3447461820136	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCCCTAGGCCCCAGGG	-20	True	NA	50	True	AATAAA	-3	NA	29230934	29192818	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_29194180_29195940_29196014_29196197_29196259_29200515_29200590_29201942_29202046_29203130_29203234_29206761_29206906_29216004_29216137_29216587_29216686_29230730
H1_mix_00003111	chr1	-	2422	10	FSM	ENSG00000116353.16	ENST00000373791.7	2416	10	0	-6	0	6	multi-exon	FALSE	canonical	3	28	junction_9	67.4190873071813	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATGCTGTAAAGAAGATAT	-10	True	NA	2	True	ATTAAA	-28	NA	29230924	29192866	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_29194180_29195940_29196014_29196197_29196259_29200515_29200590_29201942_29202046_29203130_29203234_29206761_29206906_29216004_29216137_29216587_29216813_29230730
H1_mix_00003113	chr1	-	6394	3	FSM	ENSG00000162512.16	ENST00000336798.11	6392	3	0	-2	0	1	multi-exon	FALSE	canonical	3	363	junction_1	0.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCGTGTCCAGAGTATGA	2046	False	NA	-1	True	AATAAA	-17	NA	30878740	30869464	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_30873378_30874296_30874589_30876551
H1_mix_00003116	chr1	-	5275	22	NNC	ENSG00000134644.16	novel	5360	22	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	3	112	junction_19	137.222562816877	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGCTTTATTTTAACCT	4	True	NA	0	True	AATACA	-18	NA	31065695	30931503	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_30933343_30936642_30936836_30941150_30941273_30941997_30942124_30945345_30945484_30950132_30950262_30952233_30952364_30953713_30953982_30964673_30964911_30965981_30966198_30967166_30967311_30968353_30968493_30974650_30974803_30980061_30980164_30981311_30981406_30992389_30992661_30995053_30995221_31005852_31006032_31006993_31007100_31028795_31028865_31059203_31059578_31065615
H1_mix_00003119	chr1	-	5377	22	FSM	ENSG00000134644.16	ENST00000373747.7	5375	22	0	-2	0	2	multi-exon	FALSE	canonical	3	167	junction_14	111.115086096698	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGCTTTATTTTAACCT	-5	True	NA	0	True	AATACA	-18	NA	31065704	30931503	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_30933343_30936642_30936836_30941150_30941273_30941997_30942124_30945345_30945484_30950126_30950262_30952233_30952364_30953713_30953982_30964673_30964911_30965981_30966279_30967166_30967311_30968353_30968493_30974650_30974803_30980061_30980167_30981311_30981406_30992389_30992661_30995053_30995221_31005852_31006032_31006993_31007103_31028795_31028865_31059203_31059578_31065615
H1_mix_00003120	chr1	-	5387	22	FSM	ENSG00000134644.16	ENST00000426105.7	5385	22	0	-2	0	2	multi-exon	FALSE	canonical	3	288	junction_5	96.1134769609067	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGCTTTATTTTAACCT	-18	True	NA	0	True	AATACA	-18	NA	31065717	30931503	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_30933343_30936642_30936836_30941150_30941273_30941997_30942124_30945345_30945484_30950126_30950262_30952233_30952364_30953713_30953982_30964673_30964911_30965981_30966279_30967166_30967311_30968353_30968493_30974650_30974803_30980061_30980164_30981311_30981406_30992389_30992661_30995053_30995221_31005852_31006032_31006993_31007103_31028795_31028865_31059203_31059578_31065615
H1_mix_00003121	chr1	-	5063	21	NIC	ENSG00000134644.16	novel	5385	22	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	44	junction_8	149.936519900923	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGCTTTATTTTAACCT	-18	True	NA	0	True	AATACA	-18	NA	31065717	30931503	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_30933343_30936642_30936836_30941150_30941273_30941997_30942124_30945345_30945484_30950132_30950262_30952233_30952364_30953713_30953982_30965981_30966198_30967166_30967311_30968353_30968493_30974650_30974803_30980061_30980164_30981311_30981406_30992389_30992661_30995053_30995221_31005852_31006032_31006993_31007103_31028795_31028865_31059203_31059578_31065615
H1_mix_00003124	chr1	-	2922	7	FSM	ENSG00000084628.10	ENST00000373736.7	2922	7	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_6	23.3267847953568	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCCTGTCCTGCCCATTG	7	True	NA	-4	True	ATTAAA	-20	NA	31239887	31179744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_31181713_31181859_31181942_31182529_31182591_31183816_31184015_31185246_31185328_31188049_31188188_31239493
H1_mix_00003125	chr1	-	1615	10	FSM	ENSG00000060688.13	ENST00000263694.9	1615	10	0	0	0	0	multi-exon	FALSE	canonical	3	1430	junction_2	130.173768004707	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTGCTCACTTGTTTTT	-12	True	NA	-1	True	AATACA	-19	NA	31296788	31259567	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_31260122_31261528_31261633_31267870_31267933_31269157_31269241_31271378_31271500_31281373_31281497_31289253_31289420_31291912_31292007_31293218_31293349_31296610
H1_mix_00003126	chr1	-	677	2	FSM	ENSG00000060688.13	ENST00000463988.1	677	2	0	0	0	0	multi-exon	FALSE	canonical	3	1445	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCAGAATCCTAGCTAGC	-6	True	NA	NA	False	NA	NA	NA	31296782	31292843	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_31293349_31296610
H1_mix_00003127	chr1	-	1097	4	FSM	ENSG00000121769.8	ENST00000373713.7	1097	4	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_3	3.55902608401044	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGGAGAAAATGACCACTG	-1	True	NA	NA	False	NA	NA	NA	31373076	31365252	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_31365940_31367392_31367495_31369384_31369558_31372941
H1_mix_00003128	chr1	-	2094	3	FSM	ENSG00000121769.8	ENST00000497275.5	535	3	-1443	-116	-1443	116	multi-exon	FALSE	canonical	3	330	junction_2	3.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAGAGTGGGCAGAAATA	2307	False	NA	30	True	NA	NA	NA	31371033	31365596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_31365940_31367392_31367495_31369384
H1_mix_00003129	chr1	-	1620	5	FSM	ENSG00000162517.13	ENST00000373703.5	1614	5	0	-6	0	6	multi-exon	TRUE	canonical	3	241	junction_4	23.0366555732381	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCCACCATGATTTCT	2	True	NA	-14	True	AATAAA	-23	NA	31644876	31629859	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_31630843_31632494_31632639_31633158_31633315_31635221_31635523_31644840
H1_mix_00003131	chr1	-	4978	69	NIC	ENSG00000084636.18	novel	5418	71	NA	NA	30	4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_65	13.0131354984773	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAGGTTGTGAATGTTTT	3544	False	NA	-16	True	AATAAA	-24	NA	31704289	31652583	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_31652854_31653598_31653677_31653866_31654044_31654791_31654859_31655313_31655503_31656399_31656445_31657032_31657069_31658487_31658578_31658913_31658965_31660584_31660639_31661065_31661120_31661413_31661459_31661659_31661705_31662333_31662388_31662586_31662659_31665171_31665235_31665582_31665619_31665881_31665936_31666036_31666082_31667574_31667629_31668164_31668219_31668801_31668856_31670601_31670647_31671614_31671660_31672415_31672503_31672595_31672638_31672723_31672841_31675006_31675040_31675257_31675312_31679631_31679686_31679803_31679852_31680041_31680102_31680904_31680932_31681022_31681068_31682933_31683003_31683193_31683248_31683333_31683370_31683706_31683749_31683949_31684004_31684108_31684232_31684522_31684631_31684820_31684857_31685638_31685771_31686090_31686136_31686243_31686280_31688466_31688503_31688860_31688972_31689049_31689086_31689740_31689852_31690366_31690394_31690528_31690574_31691187_31691227_31691416_31691513_31691597_31691643_31692004_31692068_31692473_31692510_31692597_31692643_31692766_31692809_31693091_31693155_31694143_31694171_31695185_31695222_31695760_31695788_31696087_31696142_31696962_31697089_31697219_31697301_31699812_31699931_31700040_31700116_31702120_31702228_31703836
H1_mix_00003133	chr1	-	558	10	FSM	ENSG00000084636.18	ENST00000470799.5	826	10	268	0	-36	0	multi-exon	FALSE	canonical	3	27	junction_5	6.11817773241609	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTGAACCACTTTTGT	7113	False	NA	NA	False	NA	NA	NA	31666117	31660584	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_31660639_31661065_31661120_31661413_31661459_31661659_31661705_31662333_31662388_31662586_31662659_31665171_31665235_31665582_31665619_31665881_31665936_31666036
H1_mix_00003134	chr1	-	464	7	FSM	ENSG00000084636.18	ENST00000529928.1	581	7	117	0	117	0	multi-exon	FALSE	canonical	3	12	junction_1	2.58198889747161	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGAACCTGGGCCTCCAG	8756	False	NA	NA	False	NA	NA	NA	31689851	31685681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_31685771_31686090_31686136_31686243_31686280_31688466_31688503_31688860_31688972_31689049_31689086_31689740
H1_mix_00003136	chr1	-	5251	29	NIC	ENSG00000121753.13	novel	5708	33	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	1	20	junction_12	18.4437921639709	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGCTGCTGAGCTGTTT	-5	True	NA	-12	True	AATAAA	-14	NA	31764359	31727117	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_31727606_31728024_31728082_31728181_31728281_31728597_31728634_31730799_31731420_31732114_31732155_31732516_31732613_31732971_31733144_31735579_31735666_31735826_31735894_31736320_31736391_31736572_31736724_31737428_31737532_31737651_31737756_31738199_31738327_31738586_31738631_31738831_31738938_31739307_31739636_31739925_31740035_31740109_31740179_31740346_31740542_31741372_31741480_31741623_31741726_31741799_31741968_31742052_31742218_31744192_31744358_31744647_31744732_31755998_31756816_31763883
H1_mix_00003137	chr1	-	1652	9	FSM	ENSG00000121753.13	ENST00000530999.1	1718	9	66	0	66	0	multi-exon	FALSE	canonical	3	17	junction_8	26.4619420111223	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTGGGGAGGGGGGAGGG	9407	False	NA	-64	True	NA	NA	NA	31735281	31727169	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_31727606_31728024_31728082_31728181_31728278_31728597_31728634_31730799_31731420_31732114_31732155_31732516_31732613_31732971_31733144_31735182
H1_mix_00003139	chr1	-	3910	6	FSM	ENSG00000184007.22	ENST00000647444.2	3910	6	0	0	0	0	multi-exon	FALSE	canonical	3	1814	junction_5	115.098218926272	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGCATTTTTTTCCTCC	-29	True	NA	-23	True	AATAAA	-18	NA	31938368	31906420	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_31908961_31910037_31910113_31911695_31911827_31915894_31915988_31918969_31919659_31937986
H1_mix_00003141	chr1	-	2731	4	FSM	ENSG00000160055.20	ENST00000466796.1	2736	4	0	5	0	0	multi-exon	FALSE	canonical	2	6	junction_2	14.290634073484	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGCTGTGCCAAATATAC	1149	False	NA	-49	True	AATATA	-13	NA	32221196	32214476	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32215050_32215135_32215549_32215672_32217352_32221130
H1_mix_00003142	chr1	-	724	6	FSM	ENSG00000160055.20	ENST00000344461.7	721	6	0	-3	0	0	multi-exon	FALSE	canonical	3	17	junction_1	19.3597520645281	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTTAGTAAGTATTCTTT	7	True	NA	1	True	AATAAA	-19	NA	32222338	32216196	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32216518_32216888_32216948_32217258_32217352_32221130_32221198_32221866_32222019_32222306
H1_mix_00003145	chr1	-	1602	4	NNC	ENSG00000175130.7	novel	1546	2	NA	NA	0	63146	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7576.41345815346	1126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCGGGCACGATGGCTCAT	-1	True	NA	NA	False	NA	NA	NA	32336233	32270692	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_32270719_32280443_32280474_32333838_32335098_32335946
H1_mix_00003146	chr1	-	1546	2	FSM	ENSG00000175130.7	ENST00000329421.8	1546	2	0	0	0	0	multi-exon	FALSE	canonical	3	16072	junction_1	0	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGCTTTAATGAGTGGT	-1	True	NA	-12	True	AATAAA	-14	NA	32336233	32333838	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32335098_32335946
H1_mix_00003147	chr1	-	3283	2	FSM	ENSG00000225828.2	ENST00000416512.1	2759	2	-154	-370	-99	369	multi-exon	FALSE	canonical	3	18	junction_1	0	386	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCATCTATCTATCTATC	NA	False	NA	-55	True	AATACA	-44	NA	32364377	32360900	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32361536_32361729
H1_mix_00003149	chr1	-	3309	11	FSM	ENSG00000160058.19	ENST00000455895.7	3309	11	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_10	33.6881284728018	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCCATCTCTACTAAAAAT	-7	True	NA	NA	False	NA	NA	NA	32394441	32364632	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32366655_32368446_32368551_32376261_32376742_32377969_32378049_32378214_32378284_32378723_32378840_32381213_32381269_32383829_32383998_32386778_32386896_32394079_32394141_32394403
H1_mix_00003150	chr1	-	2699	11	NIC	ENSG00000160058.19	novel	2925	12	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	10	junction_8	82.3024300977802	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTTTGTCCTGAACCTT	6	True	NA	-13	True	ATTAAA	-14	NA	32394428	32365171	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_32366655_32368446_32368551_32376261_32376742_32377969_32378049_32378214_32378284_32378723_32378840_32381213_32381269_32383829_32383940_32386778_32386896_32394079_32394141_32394403
H1_mix_00003154	chr1	-	1570	7	FSM	ENSG00000176261.16	ENST00000468695.6	1567	7	0	-3	0	3	multi-exon	FALSE	canonical	3	527	junction_3	211.074565550239	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTATTGTTGTTTTTGTTT	-8	True	NA	0	True	AATAAA	-22	NA	32650550	32620816	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32621949_32627507_32627545_32631826_32631880_32633644_32633728_32633950_32634073_32634767_32634793_32650432
H1_mix_00003155	chr1	-	1308	4	FSM	ENSG00000176261.16	ENST00000492007.6	817	4	0	-491	0	0	multi-exon	FALSE	canonical	3	106	junction_2	412.267712374698	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTATTGTTGTTTTTG	-7	True	NA	-3	True	AATAAA	-19	NA	32650549	32620819	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32621949_32627507_32627545_32634767_32634793_32650432
H1_mix_00003156	chr1	-	766	6	FSM	ENSG00000176261.16	ENST00000373506.8	766	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	375.03887798467	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTAGGTGTGCCTCATGCC	-12	True	NA	NA	False	NA	NA	NA	32650554	32621603	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32621949_32627507_32627545_32631826_32631880_32633644_32633728_32633950_32634073_32650428
H1_mix_00003157	chr1	-	545	6	NIC	ENSG00000176261.16	novel	598	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_5	361.686936451954	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTTGTTTTCCTCTTC	703	False	NA	-20	True	AATAAA	-17	NA	32650525	32621829	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_32621949_32627507_32627545_32631826_32631880_32633644_32633728_32633950_32634111_32650432
H1_mix_00003158	chr1	-	598	7	FSM	ENSG00000176261.16	ENST00000373501.6	598	7	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_5	336.397953818589	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTTGTTTTCCTCTTC	703	False	NA	-20	True	AATAAA	-17	NA	32650525	32621829	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32621949_32627507_32627545_32631826_32631880_32633644_32633728_32633950_32634073_32634701_32634793_32650432
H1_mix_00003159	chr1	-	514	6	FSM	ENSG00000176261.16	ENST00000436661.6	514	6	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_2	247.535532802869	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTTGTTTTCCTCTTC	668	False	NA	-20	True	AATAAA	-17	NA	32650560	32621829	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32621949_32627507_32627545_32633644_32633728_32633950_32634073_32634767_32634793_32650432
H1_mix_00003161	chr1	-	588	7	FSM	ENSG00000176261.16	ENST00000476493.6	588	7	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_6	380.655027551194	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTACGAAGAACTGTTTTTG	-8	True	NA	-31	True	AATAAA	-6	NA	32650550	32621840	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32621949_32627507_32627545_32631826_32631880_32633644_32633728_32633950_32634111_32634767_32634793_32650428
H1_mix_00003162	chr1	-	769	4	FSM	ENSG00000176261.16	ENST00000479075.6	769	4	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_3	371.51342132179	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTTGAAAGTCTTTTAA	325	False	NA	NA	False	AAGAAA	-24	NA	32650903	32631824	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32631880_32633644_32633728_32633950_32634111_32650432
H1_mix_00003166	chr1	-	2851	4	FSM	ENSG00000134684.12	ENST00000469100.5	2247	4	0	-604	0	604	multi-exon	FALSE	canonical	3	1146	junction_3	68.3975308196299	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGGGAGAGGGAAAGAGAA	NA	False	NA	NA	False	NA	NA	NA	32782103	32774632	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32776092_32779381_32779524_32780084_32780279_32781047
H1_mix_00003167	chr1	-	2445	13	FSM	ENSG00000134684.12	ENST00000373477.9	2443	13	0	-2	0	0	multi-exon	FALSE	canonical	3	1022	junction_6	107.08106352977	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGATGTGAGCTGGACCA	-8	True	NA	-31	True	AATAAA	-18	NA	32817358	32775236	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32776092_32779381_32779524_32780084_32780279_32781047_32781146_32782403_32782540_32786361_32786448_32786939_32787076_32791161_32791255_32797762_32797844_32806481_32806612_32810590_32810767_32810910_32811058_32817187
H1_mix_00003168	chr1	-	2075	11	FSM	ENSG00000134684.12	ENST00000674629.1	2075	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_10	347.176093647014	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCATCACTGTCATAAAT	-7	True	NA	-77	True	NA	NA	NA	32817357	32775282	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32776092_32779381_32779524_32780084_32780279_32781047_32781146_32782403_32782540_32786361_32786448_32786939_32787076_32791161_32791255_32797762_32797844_32806481_32806612_32817187
H1_mix_00003170	chr1	-	1018	9	FSM	ENSG00000134684.12	ENST00000616261.2	1018	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	528.237857763905	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCTGAGGTAACATGAAAG	33	True	NA	NA	False	NA	NA	NA	32817317	32786369	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32786448_32786939_32787076_32791161_32791255_32797591_32797639_32797762_32797844_32806481_32806612_32810590_32810767_32810910_32811058_32817187
H1_mix_00003174	chr1	-	2839	9	FSM	ENSG00000116514.17	ENST00000356990.9	2598	9	-241	0	-117	0	multi-exon	FALSE	canonical	3	14	junction_1	20.2048106895363	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAACTTACCTCATTTTCC	-3	True	NA	-9	True	AATAAA	-15	NA	32964926	32936453	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32937310_32938396_32938529_32942251_32942460_32944018_32944160_32945513_32945629_32946401_32946565_32948221_32948364_32949568_32949775_32964050
H1_mix_00003175	chr1	-	2681	9	FSM	ENSG00000116514.17	ENST00000235150.5	2677	9	0	-4	0	0	multi-exon	FALSE	canonical	3	42	junction_1	12.7420318238498	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCATTTTCCTTGGCTTGG	2	True	NA	0	True	AATAAA	-24	NA	32964809	32936444	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32937260_32938396_32938529_32942251_32942460_32944018_32944160_32945513_32945629_32946401_32946565_32948221_32948364_32949568_32949775_32964050
H1_mix_00003176	chr1	-	6134	6	FSM	ENSG00000004455.17	ENST00000672715.1	5970	6	0	-164	0	118	multi-exon	FALSE	canonical	3	1153	junction_3	50.3801548231047	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGCCAATTGCTTTGAC	2	True	NA	NA	False	NA	NA	NA	33036883	33007821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33024441_33024568_33036735
H1_mix_00003177	chr1	-	3893	7	FSM	ENSG00000004455.17	ENST00000373449.7	3597	7	-132	-164	-11	118	multi-exon	FALSE	canonical	3	555	junction_1	257.267046730306	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGCCAATTGCTTTGAC	NA	False	NA	NA	False	NA	NA	NA	33037015	33007821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_33010834_33013206_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33024441_33024568_33036735
H1_mix_00003178	chr1	-	3576	6	FSM	ENSG00000004455.17	ENST00000629371.2	3576	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	493.431494738631	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGTAAGTATTGCTATTA	20	False	NA	36	True	NA	NA	NA	33036911	33007939	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_33010834_33013206_33013403_33014521_33014595_33021592_33021704_33024441_33024568_33036735
H1_mix_00003179	chr1	-	936	6	FSM	ENSG00000004455.17	ENST00000548033.5	936	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_5	474.205862469034	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCTCAGAACCCCATGG	91	False	NA	NA	False	TTTAAA	-24	NA	33036840	33010477	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_33010834_33013206_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33036735
H1_mix_00003180	chr1	-	880	8	FSM	ENSG00000004455.17	ENST00000467905.5	880	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	535.117991947685	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGGAAGGGTGGTCAGGG	-1	True	NA	NA	False	NA	NA	NA	33036886	33010754	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_33010834_33012073_33012123_33013206_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33024441_33024568_33036735
H1_mix_00003182	chr1	-	920	5	FSM	ENSG00000004455.17	ENST00000487289.1	920	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	529.856289478572	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTGTAGTCCATACCTT	87	False	NA	NA	False	NA	NA	NA	33036844	33019682	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_33020162_33021366_33021462_33021592_33021704_33024441_33024568_33036735
H1_mix_00003183	chr1	-	3838	5	FSM	ENSG00000116525.14	ENST00000291416.10	3817	5	0	-21	0	21	multi-exon	FALSE	canonical	3	48	junction_1	7.42882897905181	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACACAGGCCCACCCAG	6	True	NA	20	True	ATTAAA	-43	NA	33182043	33145377	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_33147728_33158252_33158369_33159687_33159945_33165470_33165567_33181024
H1_mix_00003185	chr1	-	2551	7	FSM	ENSG00000134686.20	ENST00000373418.7	2550	7	0	-1	0	1	multi-exon	FALSE	canonical	3	66	junction_5	21.6442191409675	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGGTGCCTTTCTCCC	16	False	NA	-6	True	AATAAA	-15	NA	33349885	33323624	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_33325020_33328869_33329147_33330070_33330213_33331347_33331463_33332274_33332405_33334089_33334293_33349596
H1_mix_00003186	chr1	-	2517	7	NIC	ENSG00000134686.20	novel	2548	8	NA	NA	-61	1	combination_of_known_junctions	FALSE	canonical	3	49	junction_5	26.5706605111728	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGGTGCCTTTCTCCC	NA	False	NA	-6	True	AATAAA	-15	NA	33349946	33323624	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_33325020_33328869_33329147_33330070_33330213_33331347_33331463_33332274_33332405_33334184_33334293_33349596
H1_mix_00003187	chr1	-	7161	46	NNC	ENSG00000121904.19	novel	13655	71	NA	NA	-5	5283	at_least_one_novel_splicesite	TRUE	canonical	2	4	junction_25	6.79505993396474	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACCCCCGATATGTGAAG	-4	True	NA	NA	False	AATGAA	-42	NA	34165235	33586523	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_33586618_33587087_33587169_33600864_33601011_33602368_33602547_33605281_33605471_33611040_33611251_33614503_33614621_33616905_33616976_33617498_33617618_33622166_33622272_33623369_33623467_33624518_33624644_33625050_33625255_33626485_33626582_33633421_33633536_33635213_33635331_33636359_33636555_33646647_33646836_33652322_33652462_33657945_33658138_33662889_33663093_33692929_33693057_33698752_33698945_33700516_33700674_33709088_33709259_33714594_33714776_33716285_33716502_33724196_33724314_33724515_33724705_33725348_33725537_33726546_33726686_33739139_33739335_33743279_33743607_33772568_33772752_33788599_33788713_33792422_33792527_33810742_33810865_33819712_33819838_33820468_33820557_33825696_33825775_33846883_33846997_33918093_33918302_33935759_33935955_34032593_34032707_34088976_34089194_34164910
H1_mix_00003188	chr1	-	2431	2	FSM	ENSG00000121904.19	ENST00000489419.1	2431	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33602477	33598688	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_33601011_33602368
H1_mix_00003189	chr1	-	5756	2	FSM	ENSG00000163866.9	ENST00000521580.3	5694	2	-63	1	-57	-1	multi-exon	FALSE	canonical	3	367	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATGTGTTAATCAGATCC	2	True	NA	-3	True	ATTAAA	-14	NA	34859812	34850362	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_34855983_34859676
H1_mix_00003192	chr1	-	926	1	FSM	ENSG00000241014.2	ENST00000642415.1	926	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGAGTCTCCTGGCCTCC	7928	False	NA	NA	False	NA	NA	NA	34977395	34976469	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_34976500_34977400
H1_mix_00003193	chr1	-	931	3	FSM	ENSG00000243749.1	ENST00000373337.3	922	3	0	-9	0	9	multi-exon	FALSE	canonical	3	290	junction_1	5.5	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGCCTCATTGCTGTT	NA	False	NA	0	True	TATAAA	-21	NA	34985353	34981525	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_34982120_34983766_34983948_34985197
H1_mix_00003194	chr1	-	5097	16	NIC	ENSG00000163867.17	novel	5122	16	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	3	43	junction_15	16.7637174344542	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAATTTCATATAATTTT	-13	True	NA	-4	True	AATAAA	-22	NA	35031736	34986164	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_34988936_34992233_34992388_35003967_35004006_35005131_35005273_35006950_35007099_35008751_35008925_35010446_35010598_35010757_35011037_35011889_35012006_35012430_35012582_35014696_35014889_35014987_35015163_35019352_35019603_35020382_35020468_35030546_35030714_35031630
H1_mix_00003195	chr1	-	4895	15	NIC	ENSG00000163867.17	novel	5122	16	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_14	22.2537545559561	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAATTTCATATAATTTT	55	False	NA	-4	True	AATAAA	-22	NA	35031885	34986164	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_34988936_34992233_34992388_35003967_35004006_35005131_35005273_35006950_35007099_35008751_35008925_35010446_35010598_35010757_35011037_35011889_35012006_35012430_35012582_35014696_35014889_35014987_35015163_35019352_35019603_35020382_35020468_35031814
H1_mix_00003197	chr1	-	2900	4	FSM	ENSG00000163867.17	ENST00000317538.9	2702	4	-154	-44	-114	44	multi-exon	FALSE	canonical	3	56	junction_3	24.3903441732356	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGAGGCAGGATAGTGGAA	NA	False	NA	43	True	AATAAA	-10	NA	35032059	35017199	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_35019603_35020382_35020468_35030546_35030714_35031814
H1_mix_00003202	chr1	-	9066	12	NIC	ENSG00000116560.11	novel	3740	10	NA	NA	0	204	intron_retention	FALSE	canonical	3	198	junction_1	610.750398761046	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATTTGCCTTCACTGTA	-1	True	NA	NA	False	NA	NA	NA	35193145	35176173	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_35176472_35177318_35177400_35177988_35184594_35187000_35187123_35187202_35187252_35187972_35188091_35189002_35189088_35189185_35189383_35190497_35190594_35190693_35190996_35191340_35191530_35192221
H1_mix_00003205	chr1	-	4780	21	FSM	ENSG00000142687.18	ENST00000325722.8	4777	21	0	-3	0	3	multi-exon	TRUE	canonical	3	172	junction_20	25.4261676231397	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTCTGCTGGGTGTGCTG	-9	True	NA	-4	True	ATTAAA	-21	NA	35557403	35433488	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_35435082_35441046_35441139_35442245_35442337_35442905_35443029_35444160_35444304_35448172_35448333_35449866_35450006_35450357_35450510_35451627_35451777_35453556_35453690_35454361_35454486_35456012_35456242_35460304_35460438_35462620_35462714_35466607_35466696_35470862_35470961_35474804_35474907_35478965_35479213_35506611_35507136_35554349_35554520_35557206
H1_mix_00003207	chr1	-	2171	13	FSM	ENSG00000142687.18	ENST00000440579.5	2171	13	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_12	68.1702831151522	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAGGTACCTCTCTGCC	2673	False	NA	-4	True	NA	NA	NA	35554987	35451634	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_35451777_35453556_35453690_35454361_35454486_35456012_35456242_35460304_35460438_35462620_35462714_35466607_35466696_35470862_35470961_35474804_35474907_35478965_35479213_35506611_35507136_35554349_35554520_35554899
H1_mix_00003213	chr1	-	3533	2	FSM	ENSG00000142686.8	ENST00000270815.5	2628	2	-905	0	-895	0	multi-exon	FALSE	canonical	3	104	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTTGAGTATGTGTTT	6361	False	NA	NA	False	AATAAA	-17	NA	35719789	35713876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_35716327_35718706
H1_mix_00003214	chr1	-	8731	26	Fusion	ENSG00000142686.8_ENSG00000092853.14	novel	4769	25	NA	NA	0	2	multi-exon	FALSE	canonical	2	11	junction_2	37.3653101151322	21	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTGAGTATGTGTTTTT	0	True	NA	NA	False	AATAAA	-19	NA	35769978	35713874	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_-_35716327_35718706_35720981_35736913_35737076_35737338_35737422_35737991_35738098_35738454_35738583_35739135_35739258_35739364_35739530_35743140_35743242_35743454_35743531_35745450_35745563_35746765_35746993_35747906_35748062_35748404_35748605_35749466_35749532_35749632_35749812_35751249_35751507_35753744_35753937_35760341_35760917_35761095_35761205_35761997_35762071_35762403_35762482_35763159_35763322_35764265_35764715_35765217_35765327_35769858
H1_mix_00003216	chr1	-	8512	25	FSM	ENSG00000092853.14	ENST00000318121.8	8512	25	0	0	0	0	multi-exon	FALSE	canonical	2	78	junction_15	23.3303569530249	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCCTCTGTTTATAAAATG	0	True	NA	-5	True	AATAAA	-18	NA	35769978	35732111	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_35736607_35736913_35737076_35737338_35737422_35737991_35738098_35738454_35738583_35739135_35739258_35739364_35739530_35743140_35743242_35743454_35743531_35745450_35745563_35746765_35746993_35747906_35748062_35748404_35748605_35749466_35749532_35749632_35749812_35751249_35751507_35753744_35753937_35760341_35760917_35761095_35761205_35761997_35762071_35762403_35762482_35763159_35763322_35764265_35764715_35765217_35765327_35769846
H1_mix_00003218	chr1	-	2677	8	ISM	ENSG00000092853.14	ENST00000373220.7	3977	24	-47	22944	3	-12384	5prime_fragment	FALSE	canonical	2	91	junction_4	25.5782113909316	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAGAAGCATAAATTTCT	3	True	NA	NA	False	AATAAA	-14	NA	35769975	35759348	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_35760917_35761095_35761205_35761997_35762071_35762403_35762482_35763159_35763322_35764265_35764715_35765217_35765327_35769846
H1_mix_00003219	chr1	-	4769	4	FSM	ENSG00000171812.13	ENST00000397799.2	4669	4	-101	1	-101	1	multi-exon	FALSE	canonical	3	10	junction_1	0	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACTGTGCTGAAACTGAT	412	False	NA	NA	False	AATAAA	-17	NA	36125323	36095239	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_36099488_36100049_36100259_36115707_36115753_36125056
H1_mix_00003221	chr1	-	1282	5	FSM	ENSG00000054116.12	ENST00000373166.8	1282	5	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_2	27.0416345659799	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTCCTGTTTTCTTTCT	0	True	NA	0	True	AATAAA	-26	NA	36149486	36136571	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_36137323_36137795_36137979_36139719_36139820_36140068_36140167_36149336
H1_mix_00003225	chr1	-	988	3	FSM	ENSG00000142694.7	ENST00000490466.2	980	3	0	-8	0	8	multi-exon	FALSE	canonical	3	85	junction_2	5.5	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTCTGTTACTCCTGCC	460	False	36323661	7	True	AAGAAA	-25	NA	36323645	36322021	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_36322726_36322970_36323068_36323458
H1_mix_00003227	chr1	-	3653	11	FSM	ENSG00000196182.11	ENST00000373132.4	3645	11	0	-8	0	4	multi-exon	TRUE	canonical	3	107	junction_2	18.5916647990437	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCGTCTCCTGCCTTCT	-14	True	NA	0	True	AATAAA	-25	NA	36385924	36339619	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_36341974_36343363_36343449_36343859_36343980_36344119_36344265_36348699_36348816_36354363_36354417_36355205_36355434_36358238_36358383_36358736_36358823_36361220_36361341_36385722
H1_mix_00003228	chr1	-	1006	4	FSM	ENSG00000181817.6	ENST00000476041.1	1006	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	215.904814418041	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGCTAGTGTGGGTTGCT	16	True	NA	NA	False	NA	NA	NA	36397887	36391237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_36391605_36392357_36392488_36393765_36394154_36397766
H1_mix_00003229	chr1	-	882	2	FSM	ENSG00000181817.6	ENST00000315732.3	860	2	0	-22	0	22	multi-exon	FALSE	canonical	3	460	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATGCAGTTGTGTTCAT	-5	True	NA	-8	True	ATTAAA	-37	NA	36397908	36393413	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_36394154_36397766
H1_mix_00003231	chr1	-	1529	10	FSM	ENSG00000116885.18	ENST00000235532.9	1455	10	8	-82	0	82	multi-exon	FALSE	canonical	3	25	junction_5	8.24321644044063	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACCCCTACTGTCATTTT	-10	True	NA	74	True	NA	NA	NA	36450443	36417823	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_36418256_36418990_36419055_36420475_36420616_36422149_36422220_36422767_36422897_36423362_36423467_36431801_36431883_36432421_36432590_36438755_36438911_36450257
H1_mix_00003232	chr1	-	768	5	FSM	ENSG00000116885.18	ENST00000354267.3	767	5	0	-1	0	1	multi-exon	FALSE	canonical	3	21	junction_1	11.6913429510899	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATGTATTTAGTGCCTTA	-10	True	NA	NA	False	AATAAA	-22	NA	36450443	36428297	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_36428476_36431801_36431883_36432421_36432590_36438755_36438911_36450257
H1_mix_00003233	chr1	-	953	8	FSM	ENSG00000116898.12	ENST00000373116.6	953	8	0	0	0	0	multi-exon	FALSE	canonical	3	1469	junction_1	78.7253038697708	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAGAAGGAATTTATTCT	-18	True	NA	27	True	GGGGCT	-15	NA	36464384	36455717	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_36455926_36456186_36456379_36457922_36457982_36460691_36460777_36461263_36461313_36462087_36462164_36463805_36463851_36464145
H1_mix_00003234	chr1	-	534	2	FSM	ENSG00000116898.12	ENST00000477040.1	533	2	0	-1	0	0	multi-exon	FALSE	canonical	3	1469	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCTGTCTTGAAGAATG	9576	False	NA	-27	True	AATAAA	-16	NA	36456566	36455771	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_36455926_36456186
H1_mix_00003235	chr1	-	1996	3	FSM	ENSG00000116898.12	ENST00000488606.5	2127	3	131	0	131	0	multi-exon	FALSE	canonical	3	1469	junction_1	67.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCTGTCTTGAAGAATG	8557	False	NA	-27	True	AATAAA	-16	NA	36459572	36455771	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_36455926_36456186_36456379_36457922
H1_mix_00003238	chr1	-	2955	15	FSM	ENSG00000163873.10	ENST00000373093.4	2955	15	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_11	5.948760803902	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGTGGGTGATGGTTGCA	380	False	NA	-78	True	CATAAA	-20	NA	37034129	36804617	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_36805238_36806103_36806327_36817059_36817278_36819735_36819855_36825602_36825827_36841735_36841940_36850310_36850425_36853614_36853723_36859107_36859252_36859843_36860018_36869747_36869802_36872187_36872370_36880633_36880892_36890919_36891097_37033993
H1_mix_00003239	chr1	-	4702	7	FSM	ENSG00000163875.16	ENST00000296214.10	4702	7	0	0	0	0	multi-exon	TRUE	canonical	3	340	junction_4	32.5955859315678	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTGCTGATAATTGTTT	-4	True	NA	NA	False	AATAAA	-15	NA	37514766	37489992	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_37494108_37495884_37495919_37501803_37501997_37509277_37509324_37509454_37509543_37513422_37513539_37514656
H1_mix_00003240	chr1	-	1432	8	FSM	ENSG00000163875.16	ENST00000475828.5	1408	8	0	-24	0	0	multi-exon	FALSE	canonical	3	48	junction_3	151.013176881479	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCATGCTTTACTTTTAA	6	True	NA	-25	True	AATAAA	-18	NA	37514756	37493310	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_37494108_37495884_37495919_37496546_37496605_37501803_37501997_37509277_37509324_37509454_37509543_37513422_37513539_37514656
H1_mix_00003241	chr1	-	1057	6	FSM	ENSG00000163875.16	ENST00000373073.8	603	6	-3	-451	0	0	multi-exon	FALSE	canonical	3	24	junction_1	152.563953802987	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCATGCTTTACTTTTAA	-4	True	NA	-25	True	AATAAA	-18	NA	37514766	37493310	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_37493815_37501803_37501997_37509277_37509324_37509454_37509543_37513422_37513539_37514656
H1_mix_00003242	chr1	-	814	4	FSM	ENSG00000163875.16	ENST00000485039.1	814	4	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_2	29.4882274061286	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGATCTTTGCCTACTC	1242	False	NA	NA	False	GATAAA	-15	NA	37513520	37501414	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_37501997_37509277_37509324_37509454_37509543_37513422
H1_mix_00003244	chr1	-	5122	2	FSM	ENSG00000163877.11	ENST00000638725.1	2761	2	-120	-2241	-120	0	multi-exon	FALSE	canonical	3	33	junction_1	0	130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTCTCTTGGGTAAAAT	NA	False	NA	0	True	ATTAAA	-22	NA	37541714	37534448	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_37538013_37540156
H1_mix_00003245	chr1	-	2350	16	FSM	ENSG00000134697.13	ENST00000373062.8	2350	16	0	0	0	0	multi-exon	FALSE	canonical	3	652	junction_9	38.8766710966301	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGAAATTGTGTTTTCTT	3	True	NA	-39	True	ATTAAA	-18	NA	37595937	37566815	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_37567008_37567672_37567765_37568274_37568358_37568850_37569303_37574342_37574457_37574664_37574824_37575594_37575700_37576427_37576557_37582222_37582337_37582777_37582937_37583866_37583934_37587310_37587496_37590705_37590846_37592711_37592807_37593761_37593847_37595758
H1_mix_00003246	chr1	-	2697	5	FSM	ENSG00000116922.15	ENST00000486637.2	2696	5	0	-1	0	1	multi-exon	FALSE	canonical	3	45	junction_4	92.393181566607	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTGTCAAGTCTTATGT	-14	True	NA	0	True	AATAAA	-14	NA	37690529	37681568	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_37683161_37683318_37683438_37686272_37686453_37689605_37689884_37690001
H1_mix_00003247	chr1	-	2457	5	NIC	ENSG00000116922.15	novel	2696	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	159	junction_4	46.8534950670705	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGTGTCAAGTCTTATG	11	True	NA	-1	True	AATAAA	-13	NA	37690504	37681569	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_37683161_37683318_37683438_37686272_37686453_37689605_37689884_37690215
H1_mix_00003248	chr1	-	2678	5	NIC	ENSG00000116922.15	novel	2696	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_4	113.633181773635	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGTGTCAAGTCTTATG	11	True	NA	-1	True	AATAAA	-13	NA	37690504	37681569	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_37683161_37683318_37683442_37686272_37686453_37689605_37689887_37690001
H1_mix_00003249	chr1	-	2486	5	NIC	ENSG00000116922.15	novel	2696	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_2	88.0124280996724	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGTGTCAAGTCTTATG	-14	True	NA	-1	True	AATAAA	-13	NA	37690529	37681569	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_37683161_37683318_37683442_37686272_37686453_37689605_37689884_37690215
H1_mix_00003251	chr1	-	1848	5	FSM	ENSG00000196449.4	ENST00000373044.3	1848	5	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_1	15.1058763400208	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTTCTTCTTTTGAA	-16	True	NA	-10	True	ATTAAA	-16	NA	37808208	37802944	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_37803998_37804301_37804445_37806856_37806977_37807100_37807216_37807791
H1_mix_00003252	chr1	-	6695	3	ISM	ENSG00000188786.10	ENST00000373036.5	7937	11	36894	-60	35841	60	3prime_fragment	FALSE	canonical	2	6	junction_1	2	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCCCTTCCCAGCCATCA	876	False	NA	54	True	NA	NA	NA	37822698	37809513	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_37815567_37817418_37817483_37822120
H1_mix_00003254	chr1	-	4444	24	FSM	ENSG00000204084.13	ENST00000373024.8	4450	24	6	0	4	0	multi-exon	FALSE	non_canonical	0	0	junction_17	87.5329589559937	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTTGTGTATGTTTTTAT	-8	True	NA	-2	True	GATAAA	-17	NA	37947047	37860696	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_37862431_37864311_37864424_37865760_37865889_37866458_37866544_37868500_37868615_37872929_37873166_37873992_37874156_37875605_37875717_37878187_37878324_37880084_37880195_37882806_37882919_37885637_37885826_37886887_37887005_37887350_37887466_37888242_37888345_37889556_37889725_37891357_37891455_37931912_37932054_37940687_37940799_37943639_37943670_37943795_37943894_37945755_37945851_37946251_37946335_37946989
H1_mix_00003255	chr1	-	4679	24	FSM	ENSG00000204084.13	ENST00000373023.6	4694	24	15	0	9	0	multi-exon	FALSE	non_canonical	0	0	junction_22	82.4486321149002	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTTGTGTATGTTTTTAT	-3	True	NA	-2	True	GATAAA	-17	NA	37947042	37860696	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_37862431_37864311_37864424_37865760_37865889_37866458_37866544_37868500_37868615_37872929_37873166_37873992_37874156_37875605_37875717_37878187_37878324_37880084_37880195_37882806_37882919_37885637_37885826_37886887_37887005_37887350_37887466_37888242_37888345_37889556_37889725_37891357_37891455_37931672_37932054_37940687_37940799_37943639_37943670_37943795_37943894_37945755_37945851_37946251_37946335_37946989
H1_mix_00003257	chr1	-	2780	17	FSM	ENSG00000183431.12	ENST00000373019.5	2774	17	0	-6	0	6	multi-exon	FALSE	canonical	3	1398	junction_7	109.103090584089	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTCTTTATATTACAC	-8	True	NA	0	True	AATAAA	-24	NA	37990022	37956968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_37958264_37960119_37960176_37968043_37968135_37969353_37969465_37969570_37969736_37976883_37976954_37978719_37978828_37978987_37979056_37979464_37979534_37980585_37980725_37981728_37981812_37984168_37984261_37984706_37984780_37987572_37987679_37987783_37987837_37989547_37989596_37989869
H1_mix_00003258	chr1	-	776	8	FSM	ENSG00000183431.12	ENST00000461869.5	776	8	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_6	531.343810444762	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTAAGGAATAGTTTTTCT	-3	True	NA	NA	False	NA	NA	NA	37990075	37978989	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_37979056_37979464_37979534_37980585_37980725_37981728_37981812_37984168_37984261_37984706_37984780_37989547_37989596_37989869
H1_mix_00003260	chr1	-	1662	6	FSM	ENSG00000183386.10	ENST00000373016.4	1656	6	0	-6	0	6	multi-exon	FALSE	canonical	3	133	junction_5	27.1691000955129	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCGTGTGTGTGTGTGT	-11	True	NA	-3	True	AATAAA	-20	NA	38005514	37996763	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_37997560_37997683_37997871_37997962_37998133_37998973_37999149_37999256_37999433_38005356
H1_mix_00003261	chr1	-	1091	6	FSM	ENSG00000183386.10	ENST00000477194.5	1091	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	59.1046529471242	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACCACCTCTGGGACTCA	7147	False	NA	NA	False	NA	NA	NA	38005606	37997344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_37997560_37997683_37997871_37997962_37998133_37998973_37999149_37999256_37999433_38005438
H1_mix_00003262	chr1	-	2970	1	FSM	ENSG00000185668.8	ENST00000373012.5	2965	1	0	-5	0	5	mono-exon	FALSE	NA	NA	NA	NA	NA	419	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCCTGTCCTTTTTACTG	0	True	NA	1	True	AGTAAA	-37	NA	38046793	38043823	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_38043800_38046800
H1_mix_00003263	chr1	-	3649	3	Antisense	novelGene_ENSG00000200796.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	51	junction_1	1.5	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTATTTGTATTTTTTCT	NA	False	NA	-3	True	AGTAAA	-22	NA	38430747	38300197	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr1_-_38300438_38311252_38311381_38427466
H1_mix_00003266	chr1	-	2532	5	FSM	ENSG00000214114.9	ENST00000397572.5	2532	5	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_4	36.779749863206	216	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCCTTGCAAACTGTAAAG	7	True	NA	-4	True	ATTAAA	-17	NA	38873348	38862492	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_38864715_38866879_38867010_38867561_38867611_38873017_38873091_38873290
H1_mix_00003268	chr1	-	1884	8	FSM	ENSG00000158315.11	ENST00000372990.6	1883	8	0	-1	0	1	multi-exon	FALSE	canonical	1	2	junction_2	2.55550625999976	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGACTCCTGATAATCAC	-14	True	NA	NA	False	AATAAA	-17	NA	38941830	38885805	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_38886684_38887962_38888025_38893163_38893225_38895968_38896070_38911321_38911435_38915561_38915711_38918966_38919338_38941681
H1_mix_00003269	chr1	-	2474	15	FSM	ENSG00000090621.15	ENST00000372862.7	2470	15	0	-4	0	2	multi-exon	FALSE	canonical	3	20	junction_5	156.564389831358	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTCTCTGACCACAGTT	653	False	NA	-6	True	AATAAA	-25	NA	39576253	39560811	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563613_39563742_39564470_39564543_39564685_39564774_39565105_39565379_39567750_39567847_39568801_39568940_39569594_39569690_39569862_39570003_39571233_39571350_39572392_39572587_39575758
H1_mix_00003270	chr1	-	3052	16	FSM	ENSG00000090621.15	ENST00000372857.7	3048	16	0	-4	0	2	multi-exon	FALSE	canonical	3	184	junction_6	119.398194663441	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTCTCTGACCACAGTT	162	False	NA	-6	True	AATAAA	-25	NA	39576744	39560811	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563613_39563742_39563835_39563923_39564470_39564543_39564685_39564774_39565105_39565379_39567750_39567847_39568801_39568940_39569594_39569690_39569862_39570003_39571233_39571350_39572392_39572587_39575758
H1_mix_00003271	chr1	-	3020	15	FSM	ENSG00000090621.15	ENST00000372856.7	3016	15	0	-4	0	2	multi-exon	FALSE	canonical	3	61	junction_5	147.494880575288	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTCTCTGACCACAGTT	155	False	NA	-6	True	AATAAA	-25	NA	39576751	39560811	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563613_39563742_39564422_39564543_39564685_39564774_39565105_39565379_39567750_39567847_39568801_39568940_39569594_39569690_39569862_39570003_39571233_39571350_39572392_39572587_39575758
H1_mix_00003272	chr1	-	3146	16	FSM	ENSG00000090621.15	ENST00000372858.8	3142	16	0	-4	0	2	multi-exon	FALSE	canonical	3	300	junction_6	99.7859041481645	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTCTCTGACCACAGTT	-1	True	NA	-6	True	AATAAA	-25	NA	39576790	39560811	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563613_39563742_39563835_39563923_39564422_39564543_39564685_39564774_39565105_39565379_39567750_39567847_39568801_39568940_39569594_39569690_39569862_39570003_39571233_39571350_39572392_39572587_39575758
H1_mix_00003273	chr1	-	4314	5	FSM	ENSG00000090621.15	ENST00000676863.1	4293	5	0	-21	0	0	multi-exon	FALSE	canonical	3	556	junction_3	51.9200105932193	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAAAATCTCCATAAA	8648	False	NA	-31	True	NA	NA	NA	39568258	39560836	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_39561788_39562072_39562204_39562322_39564774_39565105_39565379_39567750
H1_mix_00003275	chr1	-	2872	14	FSM	ENSG00000090621.15	ENST00000676523.1	2849	14	0	-23	0	0	multi-exon	FALSE	canonical	3	414	junction_11	80.7442452196729	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTGTCTCTGACCACAG	982	False	NA	-8	True	AATAAA	-23	NA	39575924	39560813	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563613_39564543_39564685_39564774_39565105_39565379_39567750_39567847_39568801_39568940_39569594_39569690_39569862_39570003_39571233_39571350_39572392_39572587_39575758
H1_mix_00003278	chr1	-	3368	5	NNC	ENSG00000163909.8	novel	4077	5	NA	NA	6641	-702	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_4	7.66077672302228	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTAAACTATCTCTGGAG	6976	False	NA	-10	True	AATAAA	-40	NA	39633002	39624136	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_39627181_39630226_39630309_39631495_39631580_39632648_39632716_39632911
H1_mix_00003279	chr1	-	4561	4	FSM	ENSG00000116983.13	ENST00000372844.8	4600	4	0	39	0	-39	multi-exon	FALSE	canonical	2	2	junction_3	2.62466929133727	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTCCCCACTGACAGTG	-15	True	NA	NA	False	NA	NA	NA	39691433	39678686	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_39682734_39683936_39684153_39684441_39684612_39691305
H1_mix_00003280	chr1	-	1960	1	FSM	ENSG00000198754.5	ENST00000327582.5	1826	1	67	-201	67	201	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTACACCTGAAGGGACA	NA	False	NA	NA	False	GATAAA	-30	NA	39771281	39769321	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_39769300_39771300
H1_mix_00003285	chr1	-	3736	2	FSM	ENSG00000116990.11	ENST00000372816.3	3522	2	0	-214	0	212	multi-exon	FALSE	canonical	3	204	junction_1	0	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCTGAATTTGTACTTTA	-26	True	NA	NA	False	NA	NA	NA	39901917	39895213	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_39897971_39900938
H1_mix_00003286	chr1	-	3372	3	FSM	ENSG00000116990.11	ENST00000397332.2	3256	3	96	-212	0	212	multi-exon	FALSE	canonical	3	151	junction_2	26.5	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCTGAATTTGTACTTTA	-26	True	NA	NA	False	NA	NA	NA	39901917	39895213	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_39897971_39900938_39901444_39901807
H1_mix_00003287	chr1	-	2054	2	FSM	ENSG00000116990.11	ENST00000372815.1	1944	2	-107	-3	-13	3	multi-exon	FALSE	canonical	3	151	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGGAGTGGTAGAGTGG	-1	True	NA	-20	True	AATAAA	-19	NA	39902026	39899608	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_39901444_39901807
H1_mix_00003289	chr1	-	2284	9	FSM	ENSG00000131238.18	ENST00000642050.2	2284	9	0	0	0	0	multi-exon	FALSE	canonical	3	1582	junction_2	86.3376366366372	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGGTGTTTTCAGTATT	-5	True	NA	-17	True	AATAAA	-14	NA	40097252	40072711	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_40074184_40076841_40076914_40078559_40078659_40080396_40080488_40089409_40089513_40091328_40091400_40092044_40092173_40092397_40092508_40097114
H1_mix_00003290	chr1	-	2219	8	FSM	ENSG00000131238.18	ENST00000439754.6	2195	8	-8	-16	0	-1	multi-exon	FALSE	canonical	3	67	junction_1	593.866851015187	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTTGGTGTTTTCAGTAT	NA	False	NA	-18	True	AATAAA	-13	NA	40097260	40072712	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_40074184_40078559_40078659_40080396_40080488_40089409_40089513_40091328_40091400_40092044_40092173_40092397_40092508_40097114
H1_mix_00003291	chr1	-	1541	1	FSM	ENSG00000259943.1	ENST00000567508.1	1541	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCATTAGTGTATGTTTTA	-25	True	NA	-4	True	AATAAA	-17	NA	40257967	40256426	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_40256400_40258000
H1_mix_00003292	chr1	-	267	1	FSM	ENSG00000231296.1	ENST00000447743.1	313	1	70	-24	70	24	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTATTTTTTAAAGTTA	NA	False	NA	NA	False	NA	NA	NA	40262914	40262647	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_40262600_40262900
H1_mix_00003294	chr1	-	2852	32	FSM	ENSG00000049089.15	ENST00000372748.8	2852	32	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_30	49.0354625438433	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGAGTTGTTGGGCTTC	-2	True	NA	-6	True	NA	NA	NA	40317286	40300488	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_40301382_40301811_40301890_40302620_40302810_40303130_40303186_40303529_40303677_40303806_40303840_40303927_40303973_40304063_40304100_40304319_40304392_40304475_40304530_40304793_40304848_40305714_40305769_40306142_40306188_40307445_40307500_40307702_40307757_40308191_40308246_40309937_40309992_40310110_40310165_40310263_40310318_40310713_40310768_40311092_40311147_40311229_40311287_40311499_40311548_40311661_40311716_40312058_40312113_40312455_40312480_40312573_40312610_40312730_40312785_40314204_40314268_40314351_40314388_40315589_40315665_40317122
H1_mix_00003295	chr1	-	2806	31	NIC	ENSG00000049089.15	novel	2852	32	NA	NA	0	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_26	87.6469179276843	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGTTGTTGGGCTTCTCT	11	True	NA	-3	True	NA	NA	NA	40317273	40300485	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_40301382_40301811_40301890_40302620_40302810_40303130_40303186_40303529_40303677_40303806_40303840_40303927_40303973_40304063_40304100_40304319_40304392_40304475_40304530_40304793_40304848_40305714_40305769_40306142_40306188_40307445_40307500_40307702_40307757_40308191_40308246_40309937_40309992_40310110_40310165_40310263_40310318_40310713_40310768_40311092_40311147_40311229_40311287_40311499_40311548_40311661_40311716_40312058_40312113_40312455_40312480_40312730_40312785_40314204_40314268_40314351_40314388_40315589_40315665_40317122
H1_mix_00003296	chr1	-	3191	32	NIC	ENSG00000049089.15	novel	2852	32	NA	NA	0	0	intron_retention	FALSE	canonical	3	48	junction_30	77.3837418089741	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGAGTTGTTGGGCTTC	11	True	NA	-6	True	NA	NA	NA	40317273	40300488	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_40301382_40301811_40301890_40302620_40302810_40303130_40303186_40303529_40303677_40303806_40303840_40303927_40303973_40304063_40304100_40304319_40304392_40304475_40304530_40304793_40304848_40305714_40305769_40306142_40306188_40307445_40307500_40307702_40307757_40308191_40308246_40309937_40309992_40310110_40310165_40310263_40310318_40310713_40310768_40311092_40311147_40311229_40311287_40311499_40311548_40311661_40311716_40312058_40312113_40312455_40312480_40312573_40312610_40312730_40312785_40314204_40314268_40314351_40314388_40315237_40315665_40317122
H1_mix_00003297	chr1	-	843	14	FSM	ENSG00000049089.15	ENST00000488463.6	843	14	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_13	91.2799193067076	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGCCTCTTTTTGCTCCC	2186	False	NA	NA	False	TATAAA	-37	NA	40315438	40310110	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_40310165_40310263_40310318_40310713_40310768_40311092_40311147_40311229_40311287_40311499_40311548_40311661_40311716_40312058_40312113_40312455_40312480_40312573_40312610_40312730_40312785_40314204_40314268_40314351_40314388_40315237
H1_mix_00003302	chr1	-	7287	9	NNC	ENSG00000117016.10	novel	7259	8	NA	NA	0	3436	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	30.4302481094059	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATTTGACCAAATTCAAT	9	True	NA	NA	False	NA	NA	NA	40665682	40617243	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_40617273_40620680_40626730_40628809_40628950_40629270_40629373_40633068_40633182_40635915_40636058_40641708_40641957_40647667_40647843_40665393
H1_mix_00003303	chr1	-	7329	9	NNC	ENSG00000117016.10	novel	7259	8	NA	NA	-40	3436	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	30.4302481094059	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATTTGACCAAATTCAAT	-31	True	NA	NA	False	NA	NA	NA	40665722	40617243	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_40617275_40620680_40626730_40628809_40628950_40629270_40629373_40633068_40633182_40635915_40636058_40641708_40641957_40647667_40647843_40665393
H1_mix_00003305	chr1	-	1313	1	FSM	ENSG00000179862.7	ENST00000372638.4	1310	1	0	-3	0	3	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCGTTTTCATTTCCTTA	-1	True	NA	-2	True	AATAAA	-20	NA	40862363	40861050	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_40861000_40862400
H1_mix_00003307	chr1	-	3112	15	FSM	ENSG00000010803.16	ENST00000337495.9	3108	15	0	-4	0	2	multi-exon	FALSE	canonical	3	20	junction_11	23.8023322472434	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTTTTAATCAGTTAAC	18	True	NA	-9	True	AATAAA	-19	NA	41242110	41027197	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_41028320_41028583_41028727_41037361_41037542_41046406_41046599_41048689_41048891_41070594_41070722_41075218_41075452_41113282_41113527_41116921_41117011_41142877_41143113_41151613_41151685_41160874_41160899_41161363_41161433_41186120_41186251_41242058
H1_mix_00003308	chr1	-	3387	17	NIC	ENSG00000010803.16	novel	3323	16	NA	NA	0	2	intron_retention	FALSE	canonical	3	18	junction_12	19.5288248494373	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTTTTAATCAGTTAAC	18	True	NA	-9	True	AATAAA	-19	NA	41242110	41027197	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_41028320_41028583_41028727_41033982_41034049_41037361_41037542_41046406_41046599_41048689_41048891_41070594_41070722_41075218_41075452_41113282_41113527_41116921_41117011_41142877_41143113_41151613_41151685_41159724_41159934_41160874_41160899_41161363_41161433_41186120_41186251_41242058
H1_mix_00003309	chr1	-	3197	15	NIC	ENSG00000010803.16	novel	3252	15	NA	NA	-52	0	intron_retention	FALSE	canonical	3	39	junction_11	16.3925069990617	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAGTGTCTTTTTAATCA	13	True	NA	-15	True	AATAAA	-13	NA	41242206	41027203	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_41028320_41028583_41028727_41033982_41034049_41037361_41037542_41046406_41046599_41048689_41048891_41070594_41070722_41075218_41075452_41113282_41113527_41116921_41117011_41142877_41143113_41160874_41160899_41161363_41161433_41186120_41186251_41242058
H1_mix_00003312	chr1	-	7897	13	FSM	ENSG00000198815.9	ENST00000361346.6	5225	13	20	-2692	0	2683	multi-exon	FALSE	canonical	3	110	junction_8	24.7823862181725	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTACTTAATATTACTTAT	0	True	NA	NA	False	ATTAAA	-7	NA	42335215	42173855	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_42179826_42181916_42182025_42188736_42188929_42189302_42189405_42191302_42191720_42194889_42195065_42199101_42199231_42205761_42205864_42227882_42227967_42265114_42265190_42278347_42278673_42311049_42311111_42335058
H1_mix_00003313	chr1	-	5296	13	NNC	ENSG00000198815.9	novel	5225	13	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_11	45.4082561019714	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACAACACTGATTGGTCT	21	True	NA	-12	True	AATAAA	-19	NA	42335194	42176547	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_42179826_42181916_42182025_42188736_42188929_42189302_42189405_42191302_42191720_42194889_42195065_42199101_42199231_42205761_42205864_42227882_42227967_42265114_42265190_42278347_42278785_42311049_42311111_42335058
H1_mix_00003314	chr1	-	1574	7	FSM	ENSG00000066185.13	ENST00000611861.4	1503	7	-2	-69	-2	-17	multi-exon	FALSE	canonical	0	0	junction_1	1.11803398874989	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTATATTGGAACAAAGTT	5	True	NA	NA	False	NA	NA	NA	42456255	42430345	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_42430859_42433142_42433289_42435273_42435386_42436420_42436544_42439855_42440026_42449917_42450060_42455887
H1_mix_00003315	chr1	-	272	1	FSM	ENSG00000236876.3	ENST00000424567.1	135	1	6	-143	6	143	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGACAACGAAGGCTGTG	81	False	NA	NA	False	TTTAAA	-32	NA	42500333	42500061	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_42500100_42500300
H1_mix_00003317	chr1	-	4680	5	FSM	ENSG00000164007.11	ENST00000296387.6	2841	5	-100	-1739	-82	1739	multi-exon	FALSE	canonical	3	12	junction_1	16.872685026397	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTAAGGTTTGCTGGTTG	NA	False	NA	-5	True	AATAAA	-14	NA	42740336	42731353	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_42735135_42735877_42736031_42738228_42738314_42738420_42738586_42739840
H1_mix_00003318	chr1	-	5224	4	FSM	ENSG00000164007.11	ENST00000372539.3	1586	4	0	-3638	0	1736	multi-exon	FALSE	canonical	3	39	junction_3	7.03957069398096	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCTCTAAGGTTTGCTGG	141	False	NA	-8	True	AATAAA	-11	NA	42740140	42731356	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_42736031_42738228_42738314_42738420_42738586_42739840
H1_mix_00003319	chr1	-	2663	15	FSM	ENSG00000117385.16	ENST00000397054.7	2705	15	16	26	16	13	multi-exon	FALSE	canonical	3	113	junction_1	89.7978739351066	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAATGGAAATTTGCCCAT	NA	False	NA	-8	True	AATAAA	-33	NA	42767068	42746360	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_42746853_42747252_42747413_42747722_42747799_42748199_42748318_42750185_42750337_42752273_42752370_42752536_42752665_42754868_42754991_42755164_42755218_42755547_42755638_42757782_42757923_42758851_42758984_42759200_42759391_42762322_42762476_42766506
H1_mix_00003320	chr1	-	2740	14	FSM	ENSG00000117385.16	ENST00000460031.5	2726	14	0	-14	0	14	multi-exon	FALSE	canonical	3	393	junction_10	28.888072106999	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATGGAAATTTGCCCATT	22	True	NA	-7	True	AATAAA	-34	NA	42766989	42746359	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_42746853_42747271_42747413_42747722_42747799_42748199_42748318_42750185_42750337_42752273_42752370_42752536_42752665_42754868_42755218_42755547_42755638_42757782_42757923_42758851_42758984_42759200_42759391_42762322_42762476_42766506
H1_mix_00003321	chr1	-	3007	14	FSM	ENSG00000117385.16	ENST00000236040.8	2993	14	0	-14	0	13	multi-exon	FALSE	canonical	3	317	junction_7	42.2152836957753	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAATGGAAATTTGCCCAT	-1	True	NA	-8	True	AATAAA	-33	NA	42767012	42746360	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_42747413_42747722_42747799_42748199_42748318_42750185_42750337_42752273_42752370_42752536_42752665_42754868_42754991_42755164_42755218_42755547_42755638_42757782_42757923_42758851_42758984_42759200_42759391_42762322_42762476_42766506
H1_mix_00003322	chr1	-	2605	15	FSM	ENSG00000117385.16	ENST00000296388.10	2591	15	0	-14	0	14	multi-exon	FALSE	canonical	3	317	junction_8	40.8918434060248	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATGGAAATTTGCCCATT	-17	True	NA	-7	True	AATAAA	-34	NA	42767028	42746359	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_42746853_42747271_42747413_42747722_42747799_42748199_42748318_42750185_42750337_42752273_42752370_42752536_42752665_42754868_42754991_42755164_42755218_42755547_42755638_42757782_42757923_42758851_42758984_42759200_42759391_42762322_42762476_42766506
H1_mix_00003325	chr1	-	610	5	FSM	ENSG00000228192.9	ENST00000444563.6	646	5	33	3	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3.69966214673719	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCCAGTCTCGGGTATTC	25	False	NA	NA	False	AATAAA	-18	NA	42846387	42841897	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_42842014_42842774_42842917_42843403_42843451_42844510_42844685_42846256
H1_mix_00003326	chr1	-	3454	10	FSM	ENSG00000117394.24	ENST00000426263.10	3384	10	0	-70	0	70	multi-exon	TRUE	canonical	3	478	junction_7	55.6372732333236	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGTGTGAGAAAGGAAAAC	-1	True	NA	74	True	NA	NA	NA	42958868	42925282	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_42927242_42927604_42927809_42928931_42929034_42929209_42929315_42929592_42929781_42929872_42930036_42930625_42930867_42931045_42931207_42943225_42943322_42958633
H1_mix_00003328	chr1	-	2308	2	FSM	ENSG00000117394.24	ENST00000674545.1	2888	2	580	0	580	0	multi-exon	FALSE	canonical	3	679	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTATAGTATATCTGGAC	2174	False	NA	-20	True	ATTAAA	-11	NA	42928919	42926248	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_42927242_42927604
H1_mix_00003330	chr1	-	2018	9	FSM	ENSG00000117395.13	ENST00000236051.3	1352	9	-573	-93	-293	84	multi-exon	FALSE	canonical	3	1346	junction_6	80.4794228359026	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGTGATTTTCTTTGTGGT	NA	False	NA	84	True	NA	NA	NA	43172863	43164090	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_43164494_43164642_43164806_43166825_43166920_43167159_43167236_43168938_43169029_43170755_43170880_43171478_43171652_43171885_43171970_43172052
H1_mix_00003331	chr1	-	1503	10	FSM	ENSG00000117395.13	ENST00000431635.6	1503	10	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_9	449.492168871209	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTTGTCTCATCCTT	NA	False	NA	0	True	GATAAA	-25	NA	43172570	43164174	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_43164494_43164642_43164806_43166825_43166920_43167159_43167236_43168938_43169029_43170755_43170880_43171478_43171652_43171885_43171970_43172052_43172142_43172279
H1_mix_00003332	chr1	-	759	2	FSM	ENSG00000117395.13	ENST00000483082.1	759	2	0	0	0	0	multi-exon	FALSE	canonical	3	1621	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGCAGGAGAGTGGGAAA	3	True	NA	NA	False	NA	NA	NA	43172282	43171440	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_43171970_43172052
H1_mix_00003333	chr1	-	243	3	FSM	ENSG00000117395.13	ENST00000466927.5	300	3	0	57	0	-57	multi-exon	FALSE	canonical	2	2	junction_1	0	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGGAGTCTGGAGAAAA	9042	False	NA	NA	False	NA	NA	NA	43261910	43181738	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_43181785_43215265_43215394_43261841
H1_mix_00003335	chr1	-	1450	9	NNC	ENSG00000066322.15	novel	1466	8	NA	NA	0	9950	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	79.0996207323398	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTGTGTGTGGTGGTGT	29	True	NA	NA	False	NA	NA	NA	43367965	43353447	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_43353478_43363400_43364138_43364323_43364461_43364541_43364648_43364737_43364795_43364927_43365009_43365185_43365377_43365563_43365624_43367914
H1_mix_00003337	chr1	-	1846	8	FSM	ENSG00000066322.15	ENST00000621943.4	1625	8	-227	6	0	-3	multi-exon	FALSE	canonical	3	23	junction_7	74.7736721100169	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGGAGGCTGTGTGTATA	29	True	NA	-8	True	ATTAAA	-15	NA	43367965	43363403	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_43364138_43364323_43364461_43364541_43364648_43364737_43364795_43364927_43365009_43365185_43365377_43365563_43365624_43367485
H1_mix_00003341	chr1	-	1625	9	FSM	ENSG00000178922.18	ENST00000583037.5	1322	9	80	-383	0	369	multi-exon	FALSE	canonical	2	10	junction_7	23.8271772352497	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTACAAAGCCTTTGGTG	47	True	NA	NA	False	NA	NA	NA	43453909	43450619	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_43451312_43451427_43451545_43451647_43451718_43451797_43451848_43451934_43452014_43452204_43452320_43452902_43453005_43453412_43453498_43453594
H1_mix_00003342	chr1	-	1221	8	FSM	ENSG00000178922.18	ENST00000372430.9	1221	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	17.8759900539289	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACTTGACGGTGGCCACA	25	True	NA	NA	False	ATTAAA	-30	NA	43453931	43450988	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_43451312_43451409_43451545_43451647_43451718_43451797_43451848_43451934_43452014_43452204_43452320_43453385_43453498_43453594
H1_mix_00003343	chr1	-	1080	8	FSM	ENSG00000178922.18	ENST00000372432.5	1066	8	155	-169	0	0	multi-exon	FALSE	canonical	3	34	junction_6	13.1226552813313	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACTTGACGGTGGCCACA	20	True	NA	NA	False	ATTAAA	-30	NA	43453808	43450988	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_43451312_43451427_43451545_43451647_43451718_43451797_43451848_43451934_43452014_43452204_43452320_43453385_43453498_43453594
H1_mix_00003346	chr1	-	1312	1	FSM	ENSG00000224751.2	ENST00000419974.2	1312	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGAGCCGGCCCACCCTG	NA	False	NA	NA	False	NA	NA	NA	43851611	43850299	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_43850300_43851600
H1_mix_00003347	chr1	-	2684	14	FSM	ENSG00000196517.13	ENST00000372310.8	3206	14	-144	666	-139	294	multi-exon	FALSE	canonical	3	48	junction_9	11.0512523052726	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGCACATTTGGCTATT	NA	False	NA	NA	False	NA	NA	NA	44031606	43997148	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_43997740_43997854_43998026_44000766_44000868_44000955_44001056_44001163_44001299_44001389_44001628_44002312_44002417_44002511_44002647_44002852_44002986_44008352_44008624_44009964_44010097_44010725_44010883_44024247_44024363_44031305
H1_mix_00003348	chr1	-	592	5	FSM	ENSG00000196517.13	ENST00000492434.6	592	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	26.6739573366983	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGCCTACTGCAATAACC	8	True	NA	NA	False	NA	NA	NA	44031467	44008514	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_44008624_44009964_44010097_44010808_44010883_44024247_44024363_44031305
H1_mix_00003353	chr1	-	1518	7	NIC	ENSG00000117419.16	novel	1733	9	NA	NA	0	147	combination_of_known_junctions	FALSE	canonical	3	133	junction_6	477.159098787349	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTGTAAGCGCGGCGA	-8	True	NA	NA	False	NA	NA	NA	44355249	44220922	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_44221641_44247938_44248039_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44354891
H1_mix_00003354	chr1	-	1796	8	NIC	ENSG00000117419.16	novel	1733	9	NA	NA	0	147	combination_of_known_junctions	FALSE	canonical	3	86	junction_7	480.554356754695	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTGTAAGCGCGGCGA	-8	True	NA	NA	False	NA	NA	NA	44355249	44220922	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_44221641_44247938_44248039_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44339044_44339323_44354891
H1_mix_00003355	chr1	-	1288	8	NNC	ENSG00000117419.16	novel	1733	9	NA	NA	-51	147	at_least_one_novel_splicesite	FALSE	canonical	3	111	junction_6	572.339238635298	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTGTAAGCGCGGCGA	-1	True	NA	NA	False	NA	NA	NA	44355311	44220922	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_44221641_44247938_44248039_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44352849_44352926_44355259
H1_mix_00003356	chr1	-	1447	8	NIC	ENSG00000117419.16	novel	1733	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	111	junction_6	517.155366857377	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGAGGCTGCT	-8	True	NA	0	True	AATAAA	-39	NA	44355249	44221069	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_44221641_44247938_44248039_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44352849_44352926_44354891
H1_mix_00003357	chr1	-	1719	9	NIC	ENSG00000117419.16	novel	1733	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_7	515.831473811942	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGAGGCTGCT	-8	True	NA	0	True	AATAAA	-39	NA	44355249	44221069	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_44221641_44247938_44248039_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44339044_44339317_44352849_44352926_44354891
H1_mix_00003358	chr1	-	1733	9	FSM	ENSG00000117419.16	ENST00000372257.7	1733	9	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_8	414.298635497391	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGAGGCTGCT	-16	True	NA	0	True	AATAAA	-39	NA	44355257	44221069	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_44221641_44247938_44248039_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44339044_44339323_44352849_44352926_44354891
H1_mix_00003362	chr1	-	1579	4	FSM	ENSG00000126106.14	ENST00000372243.7	1579	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	56.1921307262463	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATGTTGCTAGGTATCT	-9	True	NA	-4	True	AATAAA	-20	NA	44674462	44635237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_44636458_44645359_44645465_44660173_44660296_44674330
H1_mix_00003364	chr1	-	2286	3	FSM	ENSG00000126106.14	ENST00000372237.8	2236	3	-68	18	-68	-18	multi-exon	FALSE	canonical	3	85	junction_1	23.5	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTGATTGAATGAGCT	15	False	NA	NA	False	NA	NA	NA	44674549	44653264	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_44655210_44660173_44660296_44674330
H1_mix_00003365	chr1	-	2216	3	FSM	ENSG00000126106.14	ENST00000372235.7	890	3	-127	-1199	-89	-19	multi-exon	FALSE	canonical	3	44	junction_1	44	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTTGATTGAATGAGC	-6	True	NA	NA	False	NA	NA	NA	44674570	44653265	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_44655120_44660173_44660296_44674330
H1_mix_00003367	chr1	-	385	1	FSM	ENSG00000234093.3	ENST00000594193.1	385	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAGGGATGTAATACATAT	7454	False	NA	NA	False	AAAACA	-30	NA	44780715	44780330	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_44780300_44780700
H1_mix_00003368	chr1	-	1205	2	ISM	ENSG00000142959.5	ENST00000372207.4	2512	9	3279	-43	3279	43	3prime_fragment	FALSE	canonical	3	25	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCAGTTATAATTGTTTA	3278	False	NA	37	True	AATATA	-10	NA	44784891	44783541	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_44784484_44784628
H1_mix_00003369	chr1	-	1900	12	FSM	ENSG00000070785.17	ENST00000360403.7	1900	12	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	56.0072309381152	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACGCCTGAGCATCAGC	-4	True	NA	NA	False	NA	NA	NA	44986595	44850521	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_44851004_44857703_44857808_44874677_44874827_44875617_44875696_44879817_44880009_44881611_44881740_44897354_44897445_44926627_44926740_44941505_44941666_44978314_44978461_44981020_44981178_44986492
H1_mix_00003370	chr1	-	1460	10	FSM	ENSG00000070785.17	ENST00000372183.7	1457	10	0	-3	0	3	multi-exon	FALSE	canonical	3	332	junction_1	28.5579333208052	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAAACTTTACTAGGAAA	4	True	NA	-2	True	AATAAA	-24	NA	44986587	44874523	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_44874827_44875617_44875696_44879817_44880009_44881611_44881740_44897354_44897445_44926627_44926740_44941505_44941666_44978314_44978461_44981020_44981178_44986492
H1_mix_00003372	chr1	-	2330	6	FSM	ENSG00000126107.15	ENST00000486132.5	2385	6	46	9	46	-1	multi-exon	FALSE	canonical	3	173	junction_5	23.6507927985512	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCTTCAGAATGTGTTTA	5769	False	NA	-8	True	AATAAA	-12	NA	45005542	45002548	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45003577_45003668_45003741_45003854_45003937_45004059_45004135_45004247_45004378_45004599
H1_mix_00003374	chr1	-	593	3	FSM	ENSG00000126107.15	ENST00000487488.5	593	3	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_2	13	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACCCCTAAAATCCTGAC	4344	False	NA	NA	False	NA	NA	NA	45006967	45005644	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45006117_45006691_45006796_45006950
H1_mix_00003375	chr1	-	5872	14	FSM	ENSG00000162415.7	ENST00000359600.6	5868	14	0	-4	0	4	multi-exon	FALSE	canonical	2	12	junction_1	5.46965810296344	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTCTCTCACTAAATG	-2	True	NA	3	True	AATAAA	-41	NA	45206605	45016394	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45019317_45020065_45020148_45020624_45020789_45034311_45034470_45035687_45035824_45036038_45036300_45038935_45039074_45040391_45040539_45043218_45043396_45051073_45051254_45058608_45058760_45060098_45060248_45087880_45088238_45205755
H1_mix_00003376	chr1	-	518	4	FSM	ENSG00000132781.20	ENST00000485271.5	507	4	0	-11	0	11	multi-exon	FALSE	canonical	2	6	junction_2	93.1748654710891	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTGAGATGGGGGTC	9148	False	NA	7	True	AGTAAA	-31	NA	45331270	45329230	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45329438_45329888_45330069_45330515_45330558_45331181
H1_mix_00003377	chr1	-	1719	16	FSM	ENSG00000132781.20	ENST00000456914.7	1708	16	0	-11	0	11	multi-exon	FALSE	canonical	2	12	junction_15	64.4780755158079	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTGAGATGGGGGTC	0	True	NA	7	True	AGTAAA	-31	NA	45339970	45329230	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333562_45334390_45334512_45339898
H1_mix_00003378	chr1	-	1755	16	FSM	ENSG00000132781.20	ENST00000354383.10	1744	16	0	-11	0	11	multi-exon	FALSE	canonical	2	38	junction_14	61.9137751680154	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTGAGATGGGGGTC	338	False	NA	7	True	AGTAAA	-31	NA	45340080	45329230	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333565_45334390_45334512_45339975
H1_mix_00003379	chr1	-	1787	16	FSM	ENSG00000132781.20	ENST00000355498.6	1776	16	0	-11	0	11	multi-exon	FALSE	canonical	2	111	junction_15	46.4549483071741	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTGAGATGGGGGTC	5	True	NA	7	True	AGTAAA	-31	NA	45340115	45329230	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333562_45334390_45334512_45339975
H1_mix_00003380	chr1	-	1899	16	FSM	ENSG00000132781.20	ENST00000372115.7	1888	16	0	-11	0	11	multi-exon	FALSE	canonical	2	95	junction_15	48.9750957120045	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTGAGATGGGGGTC	NA	False	NA	7	True	AGTAAA	-31	NA	45340470	45329230	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333562_45334390_45334512_45340218
H1_mix_00003381	chr1	-	923	5	FSM	ENSG00000132781.20	ENST00000482094.5	920	5	0	-3	0	0	multi-exon	FALSE	canonical	2	208	junction_2	29.6395006705579	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGTAAAGTGCTTATTTT	8335	False	NA	-32	True	NA	NA	NA	45332083	45329269	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660
H1_mix_00003385	chr1	-	428	3	FSM	ENSG00000070759.17	ENST00000493974.1	428	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	21.5	3783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCAGGAGGAAAGGGGAAG	104	False	NA	NA	False	AATAAA	-20	NA	45457621	45398732	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45398981_45421724_45421847_45457563
H1_mix_00003386	chr1	-	2208	6	FSM	ENSG00000280670.3	ENST00000626177.2	2229	6	21	0	-5	0	multi-exon	FALSE	canonical	3	13	junction_2	7.44580418759451	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCCTGATCCTTTTCACT	11	True	NA	60	True	ATTAAA	-18	NA	45500058	45493865	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45495167_45495417_45495546_45496555_45496624_45497298_45497384_45499344_45499444_45499531
H1_mix_00003387	chr1	-	1409	6	FSM	ENSG00000117450.15	ENST00000424390.2	1296	6	-125	12	-125	-12	multi-exon	FALSE	canonical	3	652	junction_5	2988.67859764144	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAGGTAGATATAGGGAAT	2004	False	NA	90	True	NA	NA	NA	45523172	45510925	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45511415_45514506_45514638_45514872_45514996_45515653_45515808_45518937_45519055_45522777
H1_mix_00003388	chr1	-	960	6	FSM	ENSG00000117450.15	ENST00000319248.13	945	6	0	-15	0	0	multi-exon	FALSE	canonical	3	7805	junction_5	167.765789122813	3776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAGGAAGCATATTATT	1	True	NA	-20	True	ATTAAA	-28	NA	45521884	45511035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45511415_45514506_45514638_45514872_45514996_45515653_45515808_45518937_45519055_45521828
H1_mix_00003389	chr1	-	1234	6	FSM	ENSG00000117450.15	ENST00000262746.5	1234	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	3249.31176712854	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAGGAAGCATATTATT	3238	False	NA	-20	True	ATTAAA	-28	NA	45521938	45511035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45511415_45514506_45514638_45514872_45514996_45515653_45515808_45518937_45519055_45521608
H1_mix_00003390	chr1	-	3325	5	FSM	ENSG00000159592.11	ENST00000479235.5	3121	5	-194	-10	-194	10	multi-exon	FALSE	canonical	3	595	junction_3	86.036329535842	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTGAAACTGTTTTTTA	NA	False	NA	-7	True	AATAAA	-37	NA	45635918	45627293	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45628409_45629575_45629679_45630481_45630607_45633488_45633648_45634095
H1_mix_00003391	chr1	-	3662	13	FSM	ENSG00000159592.11	ENST00000355105.8	3641	13	0	-21	0	21	multi-exon	FALSE	canonical	3	329	junction_12	132.909404190306	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTTAGTGCCCATGTA	4	True	NA	4	True	AATAAA	-34	NA	45686533	45627282	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45628409_45629575_45629679_45630481_45630607_45633488_45633648_45634095_45634237_45640209_45640404_45642426_45642500_45654542_45654830_45655189_45655320_45659027_45659143_45660183_45661226_45685575_45685621_45686411
H1_mix_00003392	chr1	-	3619	12	FSM	ENSG00000159592.11	ENST00000290795.7	3599	12	0	-20	0	20	multi-exon	FALSE	canonical	3	263	junction_11	133.001273839671	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTTTTAGTGCCCATGT	1	True	NA	3	True	AATAAA	-33	NA	45686536	45627283	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45628409_45629575_45629679_45630481_45630607_45633488_45633648_45634095_45634237_45640209_45640404_45642426_45642500_45654542_45654830_45655189_45655320_45659027_45659143_45660183_45661226_45686411
H1_mix_00003395	chr1	-	983	3	FSM	ENSG00000159592.11	ENST00000480083.5	964	3	0	-19	0	0	multi-exon	FALSE	canonical	3	329	junction_2	28.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATCATAGTGCCATAACT	1453	False	NA	NA	False	NA	NA	NA	45686653	45660529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45661226_45685575_45685621_45686411
H1_mix_00003396	chr1	-	1947	10	FSM	ENSG00000197429.11	ENST00000359942.8	1947	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	12.3628275961788	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTTGTCAGGGATTTTCA	-6	True	NA	NA	False	CATAAA	-38	NA	45750650	45694323	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45694516_45700069_45700191_45714245_45714467_45716894_45717018_45719202_45719341_45727630_45727799_45729613_45729770_45740900_45741333_45746119_45746462_45750596
H1_mix_00003397	chr1	-	7145	9	FSM	ENSG00000197429.11_ENSG00000230896.1	ENST00000396478.4	3117	9	3	-4031	0	4	multi-exon	FALSE	canonical	2	16	junction_2	10.1242283656583	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGAATGTGGCTTTCCC	-6	True	NA	-6	True	AATAAA	-24	NA	45750650	45694679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45700191_45714245_45714467_45716894_45717018_45719202_45719341_45727630_45727799_45729613_45729770_45740900_45741333_45746119_45746462_45750596
H1_mix_00003398	chr1	-	1169	5	ISM	ENSG00000197429.11	ENST00000396478.4	3117	9	20	28886	17	-28886	5prime_fragment	FALSE	canonical	3	25	junction_2	8.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTGGCTATATTCTAAT	11	True	NA	5	True	AATAAA	-24	NA	45750633	45727596	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_45727799_45729613_45729770_45740900_45741333_45746119_45746462_45750596
H1_mix_00003399	chr1	-	5596	10	FSM	ENSG00000117461.15	ENST00000262741.10	5596	10	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_7	15.6914697279198	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGTCTTCATGCTATG	19	True	NA	NA	False	AATAAA	-19	NA	46132629	46040139	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_46043872_46045917_46046089_46046550_46046626_46055794_46055972_46061928_46062072_46066053_46066180_46066910_46067092_46077514_46077614_46080641_46080751_46131846
H1_mix_00003402	chr1	-	2721	22	FSM	ENSG00000085998.15	ENST00000371984.8	2719	22	0	-2	0	2	multi-exon	FALSE	canonical	3	467	junction_1	49.1348738439858	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGTGATTGTGATTTT	-6	True	NA	-14	True	ATTAAA	-22	NA	46198434	46188680	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_46189358_46189457_46189568_46189853_46189990_46190472_46190518_46190719_46190785_46192097_46192224_46192307_46192437_46192517_46192591_46192899_46192959_46193173_46193216_46193304_46193389_46193563_46193640_46193854_46193926_46194273_46194402_46194552_46194652_46194843_46194962_46195810_46195925_46196011_46196078_46196730_46196850_46196969_46197085_46197701_46197872_46198335
H1_mix_00003403	chr1	-	2460	23	NIC	ENSG00000085998.15	novel	2543	23	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	50	junction_1	115.257275993412	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGTGATTGTGATTTT	-6	True	NA	-14	True	ATTAAA	-22	NA	46198434	46188680	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_46188981_46189241_46189358_46189457_46189568_46189853_46189990_46190472_46190518_46190719_46190785_46192097_46192224_46192307_46192437_46192517_46192591_46192899_46192959_46193173_46193216_46193304_46193389_46193563_46193640_46193854_46193926_46194273_46194402_46194552_46194652_46194843_46194962_46195810_46195925_46196011_46196078_46196730_46196850_46196969_46197085_46197701_46197872_46198335
H1_mix_00003406	chr1	-	4108	10	FSM	ENSG00000132128.18	ENST00000617190.5	4136	10	0	28	0	-28	multi-exon	FALSE	canonical	3	534	junction_6	43.8983112248645	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATATCATTTAGGTAT	-7	True	NA	NA	False	NA	NA	NA	46303616	46277489	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_46279085_46279181_46279258_46279491_46279615_46280191_46280291_46280395_46280561_46281124_46281386_46285361_46286500_46297562_46297634_46298283_46298371_46303123
H1_mix_00003410	chr1	-	2661	13	FSM	ENSG00000079277.22	ENST00000371945.10	2661	13	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	41.8535807574719	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTGGTCCTTTTTTTTT	-17	True	NA	0	True	AATAAA	-24	NA	46604268	46557406	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_46558801_46560233_46560278_46561477_46561643_46562648_46562844_46565040_46565137_46568442_46568499_46572062_46572168_46574946_46575021_46576574_46576655_46580529_46580628_46583227_46583330_46594112_46594281_46604184
H1_mix_00003413	chr1	-	702	6	ISM	ENSG00000079277.22	ENST00000371946.9	2719	14	-29	17408	3	0	5prime_fragment	FALSE	canonical	3	58	junction_5	44.3684572641421	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCCTTGATTTGGGAGA	8	True	NA	2	True	AATAAA	-20	NA	46604243	46574825	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_46575021_46576574_46576655_46580529_46580628_46583227_46583330_46594112_46594281_46604184
H1_mix_00003414	chr1	-	464	3	FSM	ENSG00000079277.22	ENST00000465783.6	464	3	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_2	6.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGAAGCTGTATTCACTG	9971	False	NA	-12	True	AATAAA	-25	NA	46594280	46580433	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_46580628_46583227_46583330_46594112
H1_mix_00003415	chr1	-	2830	4	FSM	ENSG00000142961.16	ENST00000319928.9	2738	4	-73	-19	-73	19	multi-exon	FALSE	canonical	3	9	junction_3	4.92160768674447	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGGGTGCCACATGGCT	NA	False	NA	NA	False	AATAAA	-35	NA	46616884	46607699	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_46609685_46610001_46610205_46612903_46613372_46616710
H1_mix_00003417	chr1	-	4158	9	FSM	ENSG00000123472.12	ENST00000576409.5	4158	9	0	0	0	0	multi-exon	FALSE	canonical	3	739	junction_4	96.2593339629981	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTCTTGTGTATGTACC	9223	False	NA	0	True	AATAAA	-26	NA	46668454	46632736	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_46635971_46643193_46643302_46645160_46645257_46652580_46652629_46653816_46653868_46658126_46658190_46658686_46658738_46665255_46665365_46668056
H1_mix_00003418	chr1	-	1241	7	FSM	ENSG00000123472.12	ENST00000329231.8	1241	7	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	315.984528453882	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCATCTTTATGAACTCA	9250	False	NA	NA	False	NA	NA	NA	46668427	46635422	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_46635971_46652580_46652629_46653816_46653868_46658126_46658190_46658686_46658738_46665255_46665365_46668056
H1_mix_00003420	chr1	-	535	6	FSM	ENSG00000123472.12	ENST00000474020.5	535	6	0	0	0	0	multi-exon	FALSE	canonical	3	739	junction_1	91.0757926125268	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTACTTAATAAAGATGC	9568	False	NA	NA	False	AATAAA	-41	NA	46668109	46652420	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_46652629_46653816_46653868_46658126_46658190_46658686_46658738_46665255_46665365_46668056
H1_mix_00003421	chr1	-	6346	11	FSM	ENSG00000159658.15	ENST00000674268.1	6346	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_9	95.9252313002163	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGTAAATGACTATACATA	-26	True	NA	NA	False	NA	NA	NA	46719139	46674658	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_46678637_46683299_46683426_46684490_46684603_46686783_46686871_46688352_46688545_46689586_46689692_46691826_46691938_46696550_46696650_46707905_46708052_46716290_46716444_46717902
H1_mix_00003422	chr1	-	5817	11	FSM	ENSG00000159658.15	ENST00000371933.8	5817	11	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_4	51.4553204246169	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCTGACTAAAGCCTCT	-1	True	NA	0	True	AATAAA	-22	NA	46719114	46675158	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_46678637_46683299_46683426_46684490_46684603_46686783_46686871_46688352_46688545_46689586_46689692_46691826_46691938_46696550_46696650_46707905_46708052_46716294_46716444_46717902
H1_mix_00003423	chr1	-	5647	10	FSM	ENSG00000159658.15	ENST00000674435.1	5641	10	0	-6	0	0	multi-exon	FALSE	canonical	3	87	junction_4	73.5030023742207	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCTGACTAAAGCCTCT	-23	True	NA	0	True	AATAAA	-22	NA	46719136	46675158	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_46678637_46683299_46683426_46684490_46684603_46686783_46686871_46689586_46689692_46691826_46691938_46696550_46696650_46707905_46708052_46716294_46716444_46717902
H1_mix_00003424	chr1	-	4083	4	FSM	ENSG00000159658.15	ENST00000674302.1	4120	4	0	37	0	-37	multi-exon	FALSE	canonical	3	291	junction_1	25.9529488797623	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAACATTTAAGTATTTAAT	-33	True	NA	NA	False	NA	NA	NA	46719146	46694105	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_46696650_46707905_46708052_46716294_46716444_46717902
H1_mix_00003426	chr1	-	5026	17	FSM	ENSG00000123473.17	ENST00000371877.8	5019	17	0	-7	0	7	multi-exon	TRUE	canonical	3	28	junction_3	23.0268186035327	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTTATAGTTTATTCTC	-25	True	NA	1	True	AATAAA	-29	NA	47314147	47250131	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_47251923_47260288_47260540_47262902_47263117_47269634_47269867_47272075_47272242_47280240_47281210_47282344_47282460_47287550_47287661_47289434_47289586_47293457_47293545_47295764_47295849_47299904_47300153_47301560_47301749_47302233_47302347_47304888_47304997_47310275_47310363_47314035
H1_mix_00003427	chr1	-	4811	18	NIC	ENSG00000123473.17	novel	3901	19	NA	NA	12	-1	intron_retention	TRUE	canonical	3	28	junction_3	25.9507118662819	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTTGTCTGTTATAGT	-13	True	NA	-7	True	AATAAA	-21	NA	47314135	47250139	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_47251923_47260288_47260540_47262902_47263063_47269634_47269867_47272075_47272242_47280240_47281210_47282344_47282460_47287550_47287661_47289434_47289586_47293457_47293545_47295764_47295849_47299904_47299969_47300109_47300153_47301560_47301749_47302233_47302347_47304888_47304997_47310275_47310363_47314035
H1_mix_00003428	chr1	-	3805	10	FSM	ENSG00000123473.17	ENST00000683977.1	3805	10	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	28.909821476062	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAATTATTGAGTATGAG	NA	False	NA	-110	True	NA	NA	NA	47295848	47250242	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_47251923_47262902_47263114_47269634_47269867_47272075_47272242_47280240_47281210_47282344_47282460_47287550_47287661_47289434_47289586_47293457_47293545_47295764
H1_mix_00003429	chr1	-	4471	18	FSM	ENSG00000123473.17	ENST00000682977.1	4471	18	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_17	32.3996454335762	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAAACTCCCGACCTCAG	1039	False	NA	NA	False	NA	NA	NA	47313135	47250621	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_47251923_47260288_47260540_47262902_47263117_47269634_47269867_47272075_47272242_47280240_47281210_47282344_47282460_47287550_47287661_47289434_47289586_47293457_47293545_47295764_47295849_47299904_47299969_47300109_47300153_47301560_47301749_47302233_47302347_47304888_47304997_47310275_47310363_47312947
H1_mix_00003430	chr1	-	4558	17	FSM	ENSG00000123473.17	ENST00000396221.6	4558	17	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_16	31.0518090254014	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAAACTCCCGACCTCAG	1039	False	NA	NA	False	NA	NA	NA	47313135	47250621	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_47251923_47260288_47260540_47262902_47263063_47269634_47269867_47272075_47272242_47280240_47281210_47282344_47282460_47287550_47287661_47289434_47289586_47293457_47293545_47295764_47295849_47299904_47300153_47301560_47301749_47302233_47302347_47304888_47304997_47310275_47310363_47312947
H1_mix_00003433	chr1	-	2651	1	FSM	ENSG00000237424.1	ENST00000445551.1	2509	1	-156	14	-156	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCATTCCAAAATTGGAC	2870	False	NA	NA	False	AATAAA	-10	NA	47434797	47432146	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_47432100_47434800
H1_mix_00003434	chr1	-	3505	8	NIC	ENSG00000269113.4	novel	7524	7	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	13.9839558211603	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTAGTGTTTCTGTGTG	-6	True	NA	2	True	AATAAA	-18	NA	47997375	47760527	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_47761281_47765289_47766107_47775169_47775440_47778453_47778545_47794585_47794761_47801472_47801620_47994033_47994598_47996687
H1_mix_00003435	chr1	-	7517	7	FSM	ENSG00000269113.4	ENST00000606738.3	7524	7	3	4	3	-4	multi-exon	FALSE	canonical	3	23	junction_4	8.61039423539299	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGGCTTAGTGTTTCTG	-13	True	NA	-2	True	AATAAA	-14	NA	47997382	47760531	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_47766107_47775169_47775440_47778453_47778545_47794585_47794761_47801472_47801620_47994033_47994598_47996687
H1_mix_00003436	chr1	-	817	4	FSM	ENSG00000242267.6	ENST00000401057.7	817	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	1.24721912892465	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTGGCTTGAAGGATG	NA	False	NA	NA	False	NA	NA	NA	48179230	48161798	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_48161910_48164630_48164913_48166472_48166821_48179154
H1_mix_00003441	chr1	-	1470	6	FSM	ENSG00000162373.13	ENST00000463562.1	1465	6	0	-5	0	2	multi-exon	FALSE	canonical	3	24	junction_4	24.1412510032103	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCGTGTTTTCCTTGTGTG	NA	False	NA	NA	False	AATAAA	-21	NA	48776932	48727864	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_48728044_48736238_48736453_48742622_48742772_48758899_48759367_48761336_48761471_48776605
H1_mix_00003442	chr1	-	388	3	NNC	ENSG00000186094.18	novel	1454	7	NA	NA	-212085	-228077	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	5	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGCCTGTGCCAGGTTT	29	False	NA	NA	False	NA	NA	NA	49257799	49045583	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_49045801_49245769_49245865_49257723
H1_mix_00003443	chr1	-	6821	19	FSM	ENSG00000185104.21	ENST00000396153.7	6821	19	0	0	0	0	multi-exon	TRUE	canonical	3	328	junction_9	30.3795435559303	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTCAGTCTATAAACTCT	0	True	NA	NA	False	AATAAA	-17	NA	50960267	50437027	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_50441524_50475463_50475680_50490587_50490666_50491720_50491802_50535368_50535458_50539591_50539729_50567076_50567232_50582617_50582700_50583651_50583716_50584684_50584812_50596120_50596217_50655441_50655529_50705785_50705892_50738862_50738955_50744683_50744776_50787999_50788206_50801630_50801678_50857928_50857998_50959766
H1_mix_00003444	chr1	-	870	1	FSM	ENSG00000233406.5	ENST00000480705.1	870	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGGGTTTTTAGACAAGG	NA	False	NA	NA	False	NA	NA	NA	51251472	51250602	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_51250600_51251500
H1_mix_00003445	chr1	-	2848	18	FSM	ENSG00000085831.16	ENST00000680483.1	2718	18	-14	-116	-12	116	multi-exon	TRUE	canonical	3	30	junction_17	8.72136937281206	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTAGGCCAGGCAGAAAG	-5	True	NA	NA	False	AATAAA	-17	NA	51330576	51287141	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_51288281_51288838_51288956_51290004_51290120_51290513_51290626_51294390_51294512_51296078_51296171_51301571_51301734_51302356_51302417_51302505_51302574_51303083_51303193_51305080_51305147_51305976_51306077_51309260_51309326_51311253_51311322_51312118_51312196_51312811_51312944_51321720_51321826_51330436
H1_mix_00003446	chr1	-	2733	18	FSM	ENSG00000085831.16	ENST00000413473.6	2718	18	0	-15	0	15	multi-exon	FALSE	canonical	3	21	junction_17	9.96776812451429	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGATTCTTCAGTTAAGAG	-3	True	NA	16	True	NA	NA	NA	51345116	51287242	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_51288281_51288838_51288956_51290004_51290120_51290513_51290626_51294390_51294512_51296078_51296171_51301571_51301734_51302356_51302417_51302505_51302574_51303083_51303193_51305080_51305147_51305976_51306077_51309260_51309326_51311253_51311322_51312118_51312196_51312811_51312944_51321720_51321826_51344990
H1_mix_00003449	chr1	-	4330	13	ISM	ENSG00000085832.17	ENST00000371733.8	5163	25	97166	0	4	0	3prime_fragment	FALSE	canonical	3	168	junction_5	12.2667119564381	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGTTATCATGTCGTG	-3	True	NA	-9	True	AATAAA	-20	NA	51422100	51354262	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_51356847_51361170_51361356_51363865_51364029_51365952_51366030_51394380_51394448_51399031_51399166_51400917_51400954_51402434_51402526_51403418_51403533_51405904_51406109_51408134_51408333_51409534_51409697_51421785
H1_mix_00003453	chr1	-	3895	33	FSM	ENSG00000078618.23	ENST00000354831.11	3895	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	306.10881790376	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGTTTGTATTTTATG	-1	True	NA	-3	True	AATAAA	-45	NA	51878805	51789190	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_51789434_51789567_51789658_51790532_51790650_51790899_51790991_51791577_51791662_51792045_51792099_51792376_51792425_51794471_51794611_51794822_51794855_51798248_51798412_51800555_51800684_51803813_51803965_51805509_51805562_51806793_51806914_51809314_51809402_51810280_51810405_51811993_51812099_51814034_51814090_51814550_51814610_51814692_51814814_51816311_51816390_51818065_51818136_51819799_51819874_51821497_51821556_51823663_51823787_51825286_51825383_51827795_51827870_51834016_51834171_51836130_51836213_51836368_51836439_51837486_51837621_51840225_51840515_51878274
H1_mix_00003460	chr1	-	12791	5	FSM	ENSG00000169213.7	ENST00000371655.4	12780	5	0	-11	0	11	multi-exon	FALSE	canonical	3	236	junction_1	14.0423466699836	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGACTCTTTCCTGAGTT	13	True	NA	1	True	ATTAAA	-28	NA	51990700	51907944	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_51920115_51933317_51933443_51937293_51937413_51976889_51977118_51990551
H1_mix_00003461	chr1	-	12801	6	NNC	ENSG00000169213.7	novel	12780	5	NA	NA	-36	11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	102.075658214875	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGACTCTTTCCTGAGTT	-23	True	NA	1	True	ATTAAA	-28	NA	51990736	51907944	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_51912577_51912602_51920115_51933317_51933443_51937293_51937413_51976889_51977118_51990551
H1_mix_00003462	chr1	-	1416	7	FSM	ENSG00000117862.13	ENST00000371626.9	1416	7	0	0	0	0	multi-exon	FALSE	canonical	3	1216	junction_2	108.304226859138	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTGTGATGGCCTTTTT	-5	True	NA	-8	True	AATAAA	-15	NA	52055191	52020130	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_52021013_52023490_52023575_52024509_52024580_52027274_52027349_52028577_52028631_52041536_52041598_52054999
H1_mix_00003464	chr1	-	5874	25	FSM	ENSG00000154222.15	ENST00000284376.8	5338	25	12	-548	0	544	multi-exon	FALSE	canonical	3	38	junction_18	8.2525248661647	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCGCAGGCTGAGGCAG	-26	True	NA	NA	False	AATACA	-41	NA	52366193	52350048	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_52353224_52353517_52353648_52354607_52354699_52354839_52354940_52355397_52355450_52355607_52355667_52355770_52355845_52356185_52356303_52356383_52356443_52357000_52357127_52357525_52357699_52357780_52357899_52358330_52358462_52358685_52358759_52359026_52359158_52359249_52359358_52359458_52359535_52359704_52359884_52360073_52360234_52360423_52360550_52360973_52361133_52361512_52361617_52362601_52362747_52364551_52364635_52366068
H1_mix_00003465	chr1	-	4466	19	FSM	ENSG00000154222.15	ENST00000438021.5	2521	19	0	-1945	0	0	multi-exon	FALSE	canonical	3	9	junction_1	13.603399175787	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTCTTGCTTACAATTAA	5971	False	NA	2	True	AATAAA	-24	NA	52360196	52350592	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_52353224_52353602_52353648_52354607_52354699_52354839_52354940_52355397_52355450_52355607_52355667_52355770_52355845_52356185_52356303_52356383_52356443_52357000_52357127_52357525_52357699_52357780_52357899_52358330_52358462_52358685_52358759_52359026_52359158_52359249_52359358_52359458_52359535_52359704_52359884_52360073
H1_mix_00003466	chr1	-	4335	24	FSM	ENSG00000154222.15	ENST00000491136.6	4335	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	19.7009782605697	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACGTTTATTTATCTAGG	11	True	NA	-20	True	TATAAA	-11	NA	52366156	52352531	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_52353224_52353517_52353648_52354364_52354455_52354607_52354699_52354839_52354940_52355397_52355450_52355607_52355667_52355770_52355845_52356185_52356303_52356383_52356443_52357000_52357127_52357525_52357699_52357780_52358462_52358685_52358759_52359026_52359158_52359249_52359358_52359458_52359535_52359704_52359884_52360073_52360234_52360423_52361133_52361477_52361617_52362601_52362747_52364551_52364635_52366068
H1_mix_00003469	chr1	-	5674	30	NNC	ENSG00000134744.14	novel	5853	30	NA	NA	0	0	intron_retention	FALSE	canonical	3	31	junction_21	54.4890219010113	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTAATCTGTTGTATA	451	False	NA	-7	True	AATAAA	-21	NA	52552994	52423274	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_52424003_52425348_52425508_52431012_52431461_52435364_52435466_52436754_52436979_52438219_52438336_52445786_52445870_52445956_52446005_52446264_52446443_52446589_52446668_52458335_52458450_52461133_52461224_52461512_52461617_52461711_52461770_52465069_52465174_52468180_52468268_52471951_52472103_52474831_52475536_52477707_52477883_52481422_52481636_52481803_52481843_52488908_52489036_52490731_52490802_52493610_52493663_52495426_52495516_52497005_52497184_52509595_52509713_52515890_52516055_52525562_52526374_52552930
H1_mix_00003470	chr1	-	5828	30	NIC	ENSG00000134744.14	novel	5853	30	NA	NA	0	0	intron_retention	FALSE	canonical	3	108	junction_5	38.5955275174723	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTAATCTGTTGTATA	6	True	NA	-7	True	AATAAA	-21	NA	52553082	52423274	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_52424003_52425348_52425508_52431012_52431461_52435364_52435466_52436754_52436964_52438219_52438336_52445786_52445870_52445956_52446005_52446264_52446443_52446589_52446668_52458335_52458450_52461133_52461224_52461512_52461617_52461711_52461770_52465069_52465174_52468180_52468268_52471951_52472103_52474831_52475536_52477707_52477883_52481422_52481636_52481803_52481924_52488908_52489036_52490731_52490802_52493610_52493663_52495426_52495516_52497005_52497184_52509595_52509713_52515890_52516055_52525562_52526374_52552930
H1_mix_00003471	chr1	-	5853	30	FSM	ENSG00000134744.14	ENST00000257177.9	5853	30	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_5	42.9169205438312	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTAATCTGTTGTATA	-4	True	NA	-7	True	AATAAA	-21	NA	52553092	52423274	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_52424003_52425348_52425508_52431012_52431461_52435364_52435466_52436754_52436979_52438219_52438336_52445786_52445870_52445956_52446005_52446264_52446443_52446589_52446668_52458335_52458450_52461133_52461224_52461512_52461617_52461711_52461770_52465069_52465174_52468180_52468268_52471951_52472103_52474831_52475536_52477707_52477883_52481422_52481636_52481803_52481924_52488908_52489036_52490731_52490802_52493610_52493663_52495426_52495516_52497005_52497184_52509595_52509713_52515890_52516055_52525562_52526374_52552930
H1_mix_00003472	chr1	-	5858	30	FSM	ENSG00000134744.14	ENST00000371544.7	5858	30	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	46.6472328030371	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTAATCTGTTGTATA	-12	True	NA	-7	True	AATAAA	-21	NA	52553100	52423274	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_52424003_52425348_52425508_52431012_52431461_52435364_52435466_52436754_52436976_52438219_52438336_52445786_52445870_52445956_52446005_52446264_52446443_52446589_52446668_52458335_52458450_52461133_52461224_52461512_52461617_52461711_52461770_52465069_52465174_52468180_52468268_52471951_52472103_52474831_52475536_52477707_52477883_52481422_52481636_52481803_52481924_52488908_52489036_52490731_52490802_52493610_52493663_52495426_52495516_52497005_52497184_52509595_52509713_52515890_52516055_52525562_52526374_52552930
H1_mix_00003474	chr1	-	5171	29	NIC	ENSG00000134744.14	novel	5853	30	NA	NA	19	-1	intron_retention	FALSE	canonical	2	5	junction_28	63.766584477439	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGATTCAGATTTTTTTT	6	True	NA	-9	True	AATAAA	-15	NA	52553439	52423403	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_52423914_52425348_52425508_52431012_52431461_52435364_52435466_52436754_52436979_52438219_52438336_52445786_52445870_52445956_52446005_52446264_52446443_52446589_52446668_52458335_52458450_52461133_52461224_52461512_52461617_52461711_52461770_52465069_52465174_52468180_52468268_52471951_52472103_52474831_52475536_52477707_52477883_52481422_52481636_52481803_52481924_52488908_52489036_52490731_52490802_52493610_52493663_52495426_52495516_52497005_52497184_52509595_52509713_52515890_52516055_52552930
H1_mix_00003475	chr1	-	3901	5	ISM	ENSG00000134744.14	ENST00000257177.9	5853	30	113868	5	-1969	-5	intron_retention	FALSE	canonical	3	243	junction_1	24.924887161229	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATTTGGTTAATCTGTT	NA	False	NA	-12	True	AATAAA	-16	NA	52439224	52423279	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_52424003_52425348_52425508_52431012_52431461_52435364_52435466_52436754
H1_mix_00003476	chr1	-	5710	30	NNC	ENSG00000134744.14	novel	5853	30	NA	NA	0	-2	intron_retention	FALSE	canonical	3	15	junction_4	53.3091180659136	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAGATTCAGATTTTTTT	6	True	NA	-10	True	AATAAA	-14	NA	52553082	52423404	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_52424003_52425348_52425508_52431012_52431461_52435364_52435463_52436754_52436979_52438219_52438336_52445786_52445870_52445956_52446005_52446264_52446443_52446589_52446668_52458335_52458450_52461133_52461224_52461512_52461617_52461711_52461770_52465069_52465174_52468180_52468268_52471951_52472103_52474831_52475536_52477707_52477883_52481422_52481636_52481803_52481924_52488908_52489036_52490731_52490802_52493610_52493663_52495426_52495516_52497005_52497184_52509595_52509713_52515890_52516055_52525562_52526374_52552930
H1_mix_00003477	chr1	-	5609	30	NIC	ENSG00000134744.14	novel	5853	30	NA	NA	0	-2	intron_retention	FALSE	canonical	3	62	junction_1	47.4136050153009	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAGATTCAGATTTTTTT	6	True	NA	-10	True	AATAAA	-14	NA	52553082	52423404	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_52423914_52425348_52425508_52431012_52431461_52435364_52435466_52436754_52436964_52438219_52438336_52445786_52445870_52445956_52446005_52446264_52446443_52446589_52446668_52458335_52458450_52461133_52461224_52461512_52461617_52461711_52461770_52465069_52465174_52468180_52468268_52471951_52472103_52474831_52475536_52477707_52477883_52481422_52481636_52481803_52481924_52488908_52489036_52490731_52490802_52493610_52493663_52495426_52495516_52497005_52497184_52509595_52509713_52515890_52516055_52525562_52526374_52552930
H1_mix_00003478	chr1	-	5611	29	NIC	ENSG00000134744.14	novel	5853	30	NA	NA	0	-2	intron_retention	FALSE	canonical	3	12	junction_15	54.4451605765295	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAGATTCAGATTTTTTT	6	True	NA	-10	True	AATAAA	-14	NA	52553082	52423404	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_52424003_52425348_52425508_52431012_52431461_52435364_52435466_52436754_52436964_52438219_52438336_52445786_52445870_52445956_52446005_52446264_52446443_52446589_52446668_52458335_52458450_52461133_52461224_52461512_52461617_52461711_52461770_52465069_52465174_52471951_52472103_52474831_52475536_52477707_52477883_52481422_52481636_52481803_52481924_52488908_52489036_52490731_52490802_52493610_52493663_52495426_52495516_52497005_52497184_52509595_52509713_52515890_52516055_52525562_52526374_52552930
H1_mix_00003483	chr1	-	908	3	FSM	ENSG00000162377.6	ENST00000486918.1	908	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	135.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTATAGCCTACAATGTTT	276	False	NA	-55	True	NA	NA	NA	52698068	52687561	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_52688169_52692726_52692868_52697908
H1_mix_00003484	chr1	-	528	2	Genic_Genomic	ENSG00000228929.1	novel	455	1	NA	NA	0	25508	multi-exon	FALSE	non_canonical	0	0	junction_1	0	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCCGATCTTTATTTTTT	27	False	NA	NA	False	AAAACA	-41	NA	52772648	52746685	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_-_52746715_52772149
H1_mix_00003485	chr1	-	455	1	FSM	ENSG00000228929.1	ENST00000437890.1	455	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTCTGTGTACTCAAGC	27	False	NA	NA	False	NA	NA	NA	52772648	52772193	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_52772200_52772600
H1_mix_00003486	chr1	-	1556	10	FSM	ENSG00000121310.17	ENST00000371522.9	1556	10	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_5	41.3264629893471	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACAGTGTTTTCGTGAGG	7	True	NA	0	True	AATAAA	-38	NA	52921740	52895909	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_52896598_52897436_52897485_52899173_52899225_52904645_52904834_52905033_52905091_52906518_52906612_52907867_52907955_52911565_52911654_52911722_52911791_52921552
H1_mix_00003488	chr1	-	1136	9	FSM	ENSG00000121310.17	ENST00000358358.9	1126	9	0	-10	0	0	multi-exon	FALSE	canonical	3	53	junction_5	29.0492577357839	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGGTATCATTGGCTCT	21	True	NA	-19	True	ATTAAA	-15	NA	52921726	52896222	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_52896598_52897436_52897485_52899173_52899225_52904645_52904834_52905033_52905091_52907867_52907955_52911565_52911654_52911722_52911791_52921552
H1_mix_00003493	chr1	-	1928	3	FSM	ENSG00000162383.13	ENST00000488036.5	2330	3	401	1	401	-1	multi-exon	FALSE	canonical	1	1	junction_1	2	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTCTTGTGGGCTTCAAC	3358	False	NA	NA	False	AATAAA	-15	NA	53090581	53087184	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_53088228_53088876_53088980_53089799
H1_mix_00003495	chr1	-	1912	6	FSM	ENSG00000162384.14	ENST00000483739.5	1912	6	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_3	25.5107820342694	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTTTCCTCCTGATTAA	703	False	NA	-3	True	AATAAA	-21	NA	53219920	53214136	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_53214737_53215990_53216057_53216781_53216860_53218171_53218204_53218413_53218496_53218866
H1_mix_00003496	chr1	-	1009	7	FSM	ENSG00000162384.14	ENST00000470385.5	1009	7	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_3	23.9495998574785	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAGATGGTATCTCCCCA	31	True	NA	82	True	AATGAA	-11	NA	53220592	53214374	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_53214737_53215990_53216057_53216781_53216860_53218171_53218204_53218413_53218496_53218866_53218924_53220260
H1_mix_00003497	chr1	-	490	1	FSM	ENSG00000162384.14	ENST00000602807.1	490	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCAGTCTTGGAAAGCTT	47	False	NA	0	True	ATTAAA	-21	NA	53220576	53220086	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_53220100_53220600
H1_mix_00003498	chr1	-	664	5	FSM	ENSG00000162385.11	ENST00000371470.8	656	5	0	-8	0	8	multi-exon	FALSE	canonical	3	1123	junction_2	98.4793760134578	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTCTCAATTACTTTGTA	-2	True	NA	-12	True	TATAAA	-17	NA	53238518	53226891	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_53227145_53228871_53228955_53233541_53233653_53235576_53235636_53238360
H1_mix_00003499	chr1	-	500	4	FSM	ENSG00000162385.11	ENST00000371466.4	500	4	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_2	500.720369956015	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTATTATTTTATAAAGA	17	True	NA	-46	True	AATAAA	-18	NA	53238499	53226925	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_53227145_53228871_53228955_53235576_53235636_53238360
H1_mix_00003500	chr1	-	7369	18	FSM	ENSG00000157193.18	ENST00000371454.6	3322	18	142	-4189	0	0	multi-exon	FALSE	canonical	3	61	junction_14	77.4438964246092	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTAAGTTTTGTTTCAT	173	False	NA	-6	True	ATTAAA	-16	NA	53327912	53242363	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_53247057_53250689_53250863_53255116_53255186_53257239_53257465_53258318_53258472_53260463_53260606_53262067_53262208_53262445_53262565_53264168_53264397_53266472_53266648_53271027_53271154_53271226_53271347_53275630_53275754_53276691_53277079_53280586_53280716_53289566_53289690_53326872_53326993_53327788
H1_mix_00003501	chr1	-	7271	18	FSM	ENSG00000157193.18	ENST00000662198.1	4534	18	445	-3182	0	0	multi-exon	FALSE	canonical	3	114	junction_1	57.0298895711562	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTAAGTTTTGTTTCAT	61	False	NA	-6	True	ATTAAA	-16	NA	53328024	53242363	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_53247057_53249379_53249557_53250689_53250863_53255116_53255186_53257239_53257465_53258318_53258472_53260463_53260606_53262067_53262208_53262445_53262565_53264168_53264397_53266472_53266648_53271027_53271154_53271226_53271347_53275630_53275754_53280586_53280716_53289566_53289690_53326872_53326993_53327788
H1_mix_00003502	chr1	-	7704	19	FSM	ENSG00000157193.18	ENST00000306052.12	7704	19	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_15	84.156746756819	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTAAGTTTTGTTTCAT	15	True	NA	-6	True	ATTAAA	-16	NA	53328070	53242363	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_53247057_53249379_53249557_53250689_53250863_53255116_53255186_53257239_53257465_53258318_53258472_53260463_53260606_53262067_53262208_53262445_53262565_53264168_53264397_53266472_53266648_53271027_53271154_53271226_53271347_53275630_53275754_53276691_53277079_53280586_53280716_53289566_53289690_53326872_53326993_53327788
H1_mix_00003503	chr1	-	7505	18	FSM	ENSG00000157193.18	ENST00000668448.1	4324	18	0	-3181	0	0	multi-exon	FALSE	canonical	3	42	junction_4	97.9915609670611	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTAAGTTTTGTTTCAT	-11	True	NA	-6	True	ATTAAA	-16	NA	53328096	53242363	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_53247057_53249379_53249557_53250689_53250863_53255116_53255186_53258318_53258472_53260463_53260606_53262067_53262208_53262445_53262565_53264168_53264397_53266472_53266648_53271027_53271154_53271226_53271347_53275630_53275754_53276691_53277079_53280586_53280716_53289566_53289690_53326872_53326993_53327788
H1_mix_00003505	chr1	-	3893	17	NIC	ENSG00000157193.18	novel	4324	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	42	junction_4	79.414655448475	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGTATAGATGTTCTTC	31	True	NA	-9	True	AATAAA	-16	NA	53328054	53245546	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_53247057_53249379_53249557_53250689_53250863_53255116_53255186_53258318_53258472_53260463_53260606_53262067_53262208_53262445_53262565_53264168_53264397_53266472_53266648_53271027_53271154_53271226_53271347_53275630_53275754_53280586_53280716_53289566_53289690_53326872_53326993_53327788
H1_mix_00003511	chr1	-	2583	1	FSM	ENSG00000236253.7	ENST00000566100.1	2531	1	24	-76	24	76	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATTGTTAAGACACTTCA	-2	True	NA	NA	False	NA	NA	NA	53439541	53436958	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_53437000_53439500
H1_mix_00003513	chr1	-	4734	18	FSM	ENSG00000058804.12	ENST00000371429.4	4552	18	-167	-15	0	15	multi-exon	TRUE	canonical	3	461	junction_7	54.5177029119519	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGTGTGTTTATAAGG	97	False	NA	-3	True	AATAAA	-33	NA	53838463	53765462	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_53768034_53772328_53772490_53787157_53787259_53789132_53789197_53793228_53793280_53796688_53796805_53796898_53797145_53800692_53800849_53803927_53804010_53806424_53806518_53807655_53807792_53809694_53809747_53818970_53819080_53825797_53825937_53827998_53828174_53832489_53832592_53835499_53835621_53838204
H1_mix_00003514	chr1	-	1622	11	FSM	ENSG00000058799.15	ENST00000464950.6	1602	11	0	-20	0	20	multi-exon	FALSE	canonical	3	129	junction_2	74.148769376167	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTCCTTGATGGTTTGT	1000	False	NA	2	True	NA	NA	NA	53889733	53851698	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_53852271_53855000_53855052_53860055_53860154_53866199_53866383_53866757_53866925_53871371_53871489_53878314_53878403_53878641_53878723_53883112_53883277_53888906_53888987_53889712
H1_mix_00003515	chr1	-	1875	12	NIC	ENSG00000058799.15	novel	1602	11	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_10	96.9243549295655	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGACTTTGACCTCAA	3	True	NA	-18	True	AATAAA	-27	NA	53889786	53851718	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_53852271_53855000_53855052_53860055_53860154_53866199_53866383_53866757_53866925_53871371_53871489_53878314_53878403_53878641_53878723_53883112_53883277_53888906_53888987_53889243_53889464_53889712
H1_mix_00003516	chr1	-	1583	10	NIC	ENSG00000058799.15	novel	1821	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	138	junction_1	60.0791658800246	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTCTGCATTTTGT	10	True	NA	-32	True	AATAAA	-13	NA	53889779	53851732	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_53852271_53860055_53860154_53866199_53866383_53866757_53866925_53871371_53871489_53878314_53878403_53878641_53878723_53883112_53883277_53888906_53888987_53889712
H1_mix_00003517	chr1	-	1477	10	NIC	ENSG00000058799.15	novel	1602	11	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_8	109.413362760758	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTCTGCATTTTGT	3	True	NA	-32	True	AATAAA	-13	NA	53889786	53851732	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_53852271_53855000_53855052_53860055_53860154_53866199_53866383_53866757_53866925_53871371_53871489_53878314_53878403_53878641_53878723_53888906_53888987_53889712
H1_mix_00003518	chr1	-	1831	11	FSM	ENSG00000058799.15	ENST00000072644.7	1821	11	0	-10	0	-4	multi-exon	FALSE	canonical	3	78	junction_9	94.6678403683109	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTTGTGACTTTGACC	-8	True	NA	-22	True	AATAAA	-23	NA	53889797	53851722	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_53852271_53860055_53860154_53866199_53866383_53866757_53866925_53871371_53871489_53878314_53878403_53878641_53878723_53883112_53883277_53888906_53888987_53889243_53889464_53889712
H1_mix_00003519	chr1	-	1006	8	FSM	ENSG00000058799.15	ENST00000469457.5	1009	8	0	3	0	-3	multi-exon	FALSE	canonical	3	24	junction_5	130.358688836234	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGTTCAGTCGTATATTC	9	True	NA	NA	False	NA	NA	NA	53889780	53866197	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_53866383_53866757_53866925_53871371_53871489_53878314_53878403_53878641_53878723_53888906_53888987_53889243_53889464_53889712
H1_mix_00003520	chr1	-	895	6	FSM	ENSG00000081870.12	ENST00000371378.6	894	6	0	-1	0	1	multi-exon	FALSE	canonical	3	10	junction_1	328.958356027021	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTTTGCCAAGTTTC	1	True	NA	-19	True	AATAAA	-16	NA	53945572	53916572	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_53917117_53923903_53923948_53928371_53928441_53930038_53930146_53939984_53940098_53945554
H1_mix_00003521	chr1	-	685	6	FSM	ENSG00000081870.12	ENST00000194214.10	685	6	0	0	0	0	multi-exon	FALSE	canonical	3	633	junction_5	99.674269498201	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTCAGTTTTTATTTA	-10	True	NA	-8	True	ATTAAA	-15	NA	53945699	53921560	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_53921768_53923903_53923948_53928371_53928441_53930038_53930146_53939984_53940098_53945554
H1_mix_00003522	chr1	-	605	6	NNC	ENSG00000081870.12	novel	685	6	NA	NA	-603	0	at_least_one_novel_splicesite	FALSE	canonical	3	280	junction_5	228.989432070565	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTTTCAGTTTTTATTT	-9	True	NA	-9	True	ATTAAA	-14	NA	53946302	53921561	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_53921768_53923903_53923948_53928371_53928441_53930038_53930146_53939984_53940098_53946236
H1_mix_00003525	chr1	-	6700	8	FSM	ENSG00000116209.12	ENST00000234831.10	6457	8	-237	-6	0	6	multi-exon	FALSE	canonical	3	525	junction_7	151.553721868666	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTAAAAGTGTCTACTTA	-18	True	NA	-5	True	AATAAA	-34	NA	54053441	54026674	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_54032306_54036609_54036719_54040755_54040838_54041723_54041806_54043372_54043526_54045691_54045787_54047266_54047373_54052999
H1_mix_00003526	chr1	-	1077	8	FSM	ENSG00000116209.12	ENST00000371341.5	1116	8	39	0	-24	0	multi-exon	FALSE	canonical	3	253	junction_7	227.108982199997	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGGATGTTTGGGATTGT	1	True	NA	28	True	NA	NA	NA	54053465	54031965	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_54032306_54036609_54036719_54040755_54040838_54041723_54041806_54043372_54043526_54045691_54045787_54047266_54047373_54053355
H1_mix_00003527	chr1	-	1640	8	NNC	ENSG00000116209.12	novel	6457	8	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	3	205	junction_3	248.71883970558	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGCTGAAATTTGAGT	-3	True	NA	-13	True	ATTAAA	-16	NA	54053379	54031675	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_54032306_54036609_54036719_54040755_54040841_54041723_54041806_54043372_54043526_54045691_54045787_54047266_54047373_54052999
H1_mix_00003528	chr1	-	297	1	FSM	ENSG00000280378.1	ENST00000624679.1	1755	1	1519	-61	1519	61	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGCTACTCAGGAGGCT	NA	False	NA	NA	False	AAAAAG	-36	NA	54033361	54033064	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_54033100_54033400
H1_mix_00003529	chr1	-	6070	7	FSM	ENSG00000215883.11	ENST00000421415.5	3339	7	0	-2731	0	46	multi-exon	FALSE	canonical	2	13	junction_4	12.7725834852973	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCACTTTCTCTCTCCTA	5	True	NA	43	True	GGGGCT	-7	NA	54200010	54169604	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_54174823_54179148_54179353_54184160_54184266_54187651_54187740_54195418_54195716_54196368_54196492_54199975
H1_mix_00003530	chr1	-	6193	8	FSM	ENSG00000215883.11	ENST00000534324.6	6193	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	11.4321422992815	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATGTGCTTGTTCAATG	-15	True	NA	-3	True	ATTAAA	-15	NA	54200030	54169650	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_54174823_54179148_54179353_54184160_54184266_54187651_54187740_54190747_54190897_54195418_54195716_54196368_54196492_54199975
H1_mix_00003531	chr1	-	798	4	ISM	ENSG00000215883.11	ENST00000528287.5	2642	8	29	17333	3	0	5prime_fragment	FALSE	canonical	3	40	junction_3	5.71547606649408	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAATAGCATTTACTATC	8	True	NA	-4	True	AATAAA	-15	NA	54200007	54190550	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_54190897_54195418_54195716_54196368_54196492_54199975
H1_mix_00003532	chr1	-	3276	18	FSM	ENSG00000157216.16	ENST00000610401.5	3276	18	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_13	50.3013754653133	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTTCCTGACATGTTTG	-2	True	NA	-23	True	ATTAAA	-19	NA	54406419	54225432	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_54227161_54228254_54228357_54228448_54228478_54228747_54228827_54239128_54239200_54240904_54240960_54241473_54241510_54242163_54242213_54243234_54243300_54251615_54251693_54251793_54251861_54257126_54257187_54258068_54258150_54281437_54281528_54401860_54401946_54404575_54404638_54404857_54404931_54405952
H1_mix_00003535	chr1	-	2784	17	FSM	ENSG00000157216.16	ENST00000371319.8	2784	17	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_12	68.1789637186574	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTTCCTGACATGTTTG	7473	False	NA	-23	True	ATTAAA	-19	NA	54406008	54225432	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_54227161_54228254_54228357_54228448_54228478_54228747_54228827_54239128_54239200_54240904_54240960_54241473_54241510_54242163_54242213_54243234_54243300_54251615_54251693_54251793_54251861_54257126_54257187_54281437_54281528_54401860_54401946_54404575_54404638_54404857_54404931_54405952
H1_mix_00003536	chr1	-	2356	2	FSM	ENSG00000162396.6	ENST00000371279.4	2356	2	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCCTTGCACATTAATTT	-3	True	NA	-15	True	AATAAA	-16	NA	54764523	54756897	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_54759191_54764460
H1_mix_00003537	chr1	-	4261	10	NNC	ENSG00000116133.13	novel	4314	10	NA	NA	0	27745	intron_retention	FALSE	non_canonical	0	0	junction_1	816.345106761432	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGGCATCTAAATTAGAA	-13	True	NA	NA	False	AAAAAG	-5	NA	54887195	54821881	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_54821916_54849632_54852387_54853433_54853613_54854036_54854235_54865302_54865447_54871349_54871614_54875092_54875212_54875941_54876048_54883617_54883774_54886888
H1_mix_00003538	chr1	-	4287	9	FSM	ENSG00000116133.13	ENST00000371269.9	4233	9	0	-54	0	54	multi-exon	FALSE	canonical	3	2242	junction_1	204.988261859064	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGGCTGTGCCATTCCCC	-13	True	NA	53	True	NA	NA	NA	54887195	54849572	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_54852387_54853433_54853613_54854036_54854235_54865302_54865447_54871349_54871614_54875092_54875212_54875941_54876048_54883617_54883774_54886888
H1_mix_00003539	chr1	-	2027	10	FSM	ENSG00000116133.13	ENST00000436604.2	2027	10	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	802.001954986688	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGCGAGCTGTGCAACGT	-13	True	NA	NA	False	NA	NA	NA	54887195	54850875	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_54851246_54852202_54852387_54853433_54853613_54854036_54854235_54865302_54865447_54871349_54871614_54875092_54875212_54875941_54876048_54883617_54883774_54886888
H1_mix_00003541	chr1	-	10801	68	FSM	ENSG00000162402.14	ENST00000294383.7	10800	68	0	-1	0	1	multi-exon	TRUE	canonical	3	57	junction_67	30.3961517537108	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGTCTTGCCGCCATTC	-36	True	NA	0	True	AATAAA	-17	NA	55215364	55066357	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_55069108_55071813_55071925_55072316_55072404_55072785_55072862_55073827_55073907_55075456_55075524_55077234_55077301_55078537_55078652_55079537_55079660_55081321_55081425_55083271_55083365_55083771_55083889_55085941_55086039_55089626_55089741_55092022_55092127_55092820_55092917_55093936_55094088_55095254_55095397_55096497_55096623_55096951_55097173_55097597_55097718_55097942_55098085_55098475_55098559_55099770_55099870_55100838_55100965_55101583_55101704_55103875_55104021_55106145_55106264_55107238_55107431_55110184_55110247_55120595_55120757_55121435_55121507_55123446_55123603_55124468_55124629_55125319_55125549_55125662_55125759_55129476_55129575_55132544_55132701_55134069_55134164_55134327_55134414_55137514_55137689_55137805_55137905_55138607_55138719_55138943_55139011_55141615_55141732_55142741_55142796_55142978_55143120_55144126_55144204_55145997_55146110_55146928_55147061_55147648_55147799_55148462_55148571_55153869_55153918_55154118_55154281_55154370_55154467_55154670_55154779_55156947_55157052_55157255_55157371_55158877_55159037_55159610_55159686_55162198_55162265_55165884_55165951_55166567_55166604_55171555_55171679_55172376_55172521_55176375_55176444_55177966_55178133_55214789
H1_mix_00003542	chr1	-	10868	68	NNC	ENSG00000162402.14	novel	10800	68	NA	NA	-70	1	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_67	31.5520552388792	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGTCTTGCCGCCATTC	20	False	NA	0	True	AATAAA	-17	NA	55215434	55066357	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_55069108_55071813_55071925_55072316_55072404_55072785_55072862_55073827_55073907_55075456_55075524_55077234_55077301_55078537_55078652_55079537_55079660_55081321_55081425_55083271_55083365_55083771_55083889_55085941_55086039_55089626_55089741_55092022_55092127_55092820_55092917_55093936_55094088_55095254_55095397_55096497_55096623_55096951_55097173_55097597_55097718_55097942_55098085_55098475_55098559_55099770_55099870_55100838_55100965_55101583_55101704_55103875_55104021_55106145_55106264_55107238_55107431_55110184_55110247_55120595_55120757_55121435_55121507_55123446_55123603_55124468_55124629_55125319_55125549_55125662_55125759_55129476_55129575_55132544_55132701_55134069_55134164_55134327_55134414_55137514_55137689_55137805_55137905_55138607_55138719_55138943_55139011_55141615_55141732_55142741_55142796_55142978_55143120_55144126_55144204_55145997_55146110_55146928_55147061_55147648_55147799_55148462_55148571_55153869_55153918_55154118_55154281_55154370_55154467_55154670_55154779_55156947_55157052_55157255_55157371_55158877_55159037_55159610_55159686_55162198_55162265_55165884_55165951_55166567_55166604_55171555_55171679_55172376_55172521_55176375_55176444_55177966_55178130_55214789
H1_mix_00003543	chr1	-	614	6	FSM	ENSG00000162402.14	ENST00000484447.5	614	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	70.0085709038543	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAACTAAGTGTCAGTTAA	NA	False	NA	-3	True	AATAAA	-31	NA	55075499	55071272	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_55071491_55071813_55071925_55072316_55072404_55072785_55072862_55073827_55073907_55075456
H1_mix_00003545	chr1	-	4932	6	FSM	ENSG00000162407.9	ENST00000371250.4	3273	6	0	-1659	0	1659	multi-exon	FALSE	canonical	3	181	junction_5	8.97552226892675	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGGAG	-1	True	NA	NA	False	NA	NA	NA	56579563	56493101	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_56496677_56511975_56512153_56523822_56523881_56524276_56524555_56536954_56537113_56578877
H1_mix_00003546	chr1	-	637	3	FSM	ENSG00000162407.9	ENST00000472957.1	696	3	59	0	59	0	multi-exon	FALSE	canonical	1	1	junction_2	90.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACTAAAACGATTTGAGTA	7594	False	NA	NA	False	NA	NA	NA	56516947	56496275	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_56496677_56511975_56512153_56516888
H1_mix_00003547	chr1	-	5226	13	NIC	ENSG00000173406.16	novel	5301	15	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_7	23.7744026680424	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTAGCCTGGCTTTATTCT	0	True	NA	1	True	AATAAA	-18	NA	57424090	56994777	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_56998129_57010679_57010791_57011144_57011273_57014882_57015432_57023530_57023640_57025980_57026044_57062883_57062944_57071521_57071642_57072282_57072415_57136542_57136642_57145289_57145430_57290963_57291167_57423929
H1_mix_00003550	chr1	-	669	4	NNC	ENSG00000173406.16	novel	722	3	NA	NA	0	1408	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	42.6692707538653	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTTTCCTGTCTTGGGA	-12	True	NA	NA	False	AATAAA	-18	NA	57424060	57144008	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_57144204_57145289_57145430_57290963_57291167_57423929
H1_mix_00003553	chr1	-	1900	9	NIC	ENSG00000162600.12	novel	1861	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_8	24.7941525364349	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTTCTACTTGCTTT	3	True	NA	NA	False	AATAAA	-19	NA	58546726	58480718	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_58481175_58506059_58506210_58527260_58527336_58530600_58530730_58533952_58534061_58534157_58534332_58536512_58536742_58538794_58539311_58546663
H1_mix_00003554	chr1	-	1861	9	FSM	ENSG00000162600.12	ENST00000371226.8	1861	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	35.7561183575623	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTTCTACTTGCTTT	3	True	NA	NA	False	AATAAA	-19	NA	58546726	58480718	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_58481175_58506059_58506210_58527260_58527336_58530600_58530730_58533952_58534061_58534157_58534332_58536512_58536742_58538794_58539311_58546702
H1_mix_00003557	chr1	-	6903	8	ISM	ENSG00000162601.11	ENST00000493821.6	7794	16	19805	0	-1374	0	3prime_fragment	FALSE	canonical	3	133	junction_7	44.0092754601869	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTGGATTATTTCTAAA	NA	False	NA	-17	True	AATAAA	-19	NA	58669857	58654738	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_58660156_58661169_58661228_58661405_58661512_58665498_58665632_58667037_58667227_58667846_58667922_58668631_58668683_58668983
H1_mix_00003558	chr1	-	8978	6	ISM	ENSG00000162601.11	ENST00000655340.1	4436	21	29466	11288	-2123	11	intron_retention	FALSE	canonical	3	160	junction_5	38.7659644533707	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTCTAAATTATTAGCAAT	NA	False	NA	-6	True	AATAAA	-30	NA	58670606	58654727	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_58661228_58661405_58661512_58665498_58665632_58667037_58667227_58667846_58667922_58668631
H1_mix_00003560	chr1	-	7766	20	FSM	ENSG00000162601.11	ENST00000472487.6	7751	20	0	-15	0	11	multi-exon	TRUE	canonical	3	101	junction_15	42.4312381659924	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTCTAAATTATTAGCAAT	3	True	NA	-6	True	AATAAA	-30	NA	58700062	58654727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_58660156_58661169_58661228_58661405_58661512_58665498_58665632_58667037_58667227_58667846_58667922_58668631_58668683_58668983_58669039_58671869_58671959_58673572_58673651_58675476_58675581_58676925_58677057_58681784_58682546_58685152_58685252_58689037_58689117_58690225_58690250_58690339_58690418_58692860_58692932_58695128_58695208_58699984
H1_mix_00003568	chr1	-	948	7	NIC	ENSG00000162604.12	novel	921	8	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_6	93.0049281848369	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTAGTGCTTTGTTAT	381	False	NA	-8	True	AATAAA	-16	NA	61725081	61681047	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_61681351_61683416_61683547_61694696_61694771_61700933_61701026_61709328_61709438_61723712_61723773_61724901
H1_mix_00003569	chr1	-	932	6	NIC	ENSG00000162604.12	novel	921	8	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_5	94.7409098541913	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTAGTGCTTTGTTAT	10	True	NA	-8	True	AATAAA	-16	NA	61725125	61681047	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_61681351_61683416_61683547_61694696_61694771_61700933_61701026_61709328_61709438_61724901
H1_mix_00003571	chr1	-	280	1	FSM	ENSG00000271200.1	ENST00000605725.1	427	1	144	3	144	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGGGAGTCATTATTT	NA	False	NA	-3	True	AATAAA	-17	NA	61742280	61742000	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_61742000_61742300
H1_mix_00003574	chr1	-	7233	50	FSM	ENSG00000116641.18	ENST00000635253.2	7233	50	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_17	36.885958406014	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATAGTAGTAAGAACTTCA	-30	True	NA	NA	False	ATTAAA	-15	NA	62688386	62454725	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_62455457_62457537_62457706_62473981_62474089_62475207_62475352_62475706_62475944_62476066_62476157_62477699_62477826_62487397_62487413_62488933_62489066_62492703_62492848_62494274_62494468_62495580_62495682_62496338_62496498_62504629_62504783_62505681_62505817_62507961_62508059_62510576_62510674_62513443_62513607_62513715_62513899_62528150_62528306_62529276_62529447_62535492_62535633_62537890_62538062_62539544_62539659_62539751_62539893_62542607_62542704_62543655_62543746_62544946_62545040_62552731_62552902_62555824_62555990_62558988_62559221_62561616_62561704_62577261_62577364_62578827_62578967_62583183_62583255_62586506_62586625_62618705_62618869_62619899_62619994_62625258_62625402_62631239_62631406_62633497_62633579_62634772_62634923_62636536_62636604_62647690_62647777_62648105_62648319_62648414_62648545_62653724_62653794_62653983_62654160_62663024_62663131_62688226
H1_mix_00003578	chr1	-	2687	16	FSM	ENSG00000116641.18	ENST00000404627.3	2678	16	-93	84	-75	-84	multi-exon	FALSE	canonical	3	11	junction_1	33.8346305170046	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATACCTGCTAATATGC	-3	True	NA	-86	True	AATAAA	-32	NA	62688461	62584188	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_62584879_62586506_62586625_62618705_62618869_62619899_62619994_62625258_62625402_62631239_62631406_62633497_62633579_62634772_62634923_62636536_62636604_62647690_62647777_62648105_62648319_62648414_62648545_62653724_62653794_62653983_62654160_62663024_62663131_62688226
H1_mix_00003579	chr1	-	452	2	FSM	ENSG00000116641.18	ENST00000636635.1	122	2	-18	-312	-18	312	multi-exon	FALSE	canonical	3	38	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTAGAATTTCTTTGT	56	True	NA	2	True	AATAAA	-24	NA	62688300	62687278	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_62687657_62688226
H1_mix_00003581	chr1	-	470	2	FSM	ENSG00000230798.6	ENST00000686639.1	1414	2	939	5	106	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	2219	False	NA	-53	True	AATAAA	-24	NA	63321529	63320883	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_63321191_63321366
H1_mix_00003582	chr1	-	2519	3	FSM	ENSG00000230798.6	ENST00000688951.1	1260	3	-1265	6	19	0	multi-exon	FALSE	canonical	0	0	junction_1	471	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	9	True	NA	-53	True	AATAAA	-24	NA	63323739	63320883	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_63321191_63321366_63321464_63321624
H1_mix_00003583	chr1	-	2019	3	FSM	ENSG00000230798.6	ENST00000686286.1	1247	3	65	-837	17	837	multi-exon	FALSE	canonical	0	0	junction_1	301.5	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCGCGTAGCGTGAAAAGCA	17	True	NA	NA	False	AATAAA	-33	NA	63322436	63320040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_63321191_63321366_63321464_63321664
H1_mix_00003584	chr1	-	886	4	NIC	ENSG00000230798.6	novel	837	4	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	470.489815688572	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	17	True	NA	-53	True	AATAAA	-24	NA	63322436	63320883	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_63321191_63321366_63321464_63321583_63321945_63322315
H1_mix_00003585	chr1	-	941	4	FSM	ENSG00000230798.6	ENST00000418244.6	1006	4	65	0	17	0	multi-exon	FALSE	canonical	0	0	junction_1	272.422466033916	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	17	True	NA	-53	True	AATAAA	-24	NA	63322436	63320883	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_63321191_63321366_63321464_63321664_63322081_63322315
H1_mix_00003586	chr1	-	547	3	FSM	ENSG00000230798.6	ENST00000690549.1	571	3	18	6	0	0	multi-exon	FALSE	canonical	0	0	junction_1	175	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	-5	True	NA	-53	True	AATAAA	-24	NA	63322458	63320883	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_63321191_63321366_63321464_63322315
H1_mix_00003587	chr1	-	496	3	FSM	ENSG00000230798.6	ENST00000431294.6	678	3	176	6	176	0	multi-exon	FALSE	canonical	0	0	junction_1	21.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	166	False	NA	-53	True	AATAAA	-24	NA	63323582	63320883	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_63321191_63321366_63321464_63323490
H1_mix_00003588	chr1	-	491	3	FSM	ENSG00000230798.6	ENST00000427268.1	491	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	84.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	NA	False	NA	-53	True	AATAAA	-24	NA	63324441	63320883	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_63321191_63321366_63321464_63324354
H1_mix_00003590	chr1	-	762	8	NIC	ENSG00000142856.17	novel	1285	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_6	194.692012141836	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGTAGAACTCTGTGT	24	True	NA	-10	True	AATAAA	-19	NA	63523182	63440769	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_63441104_63446805_63446857_63447564_63447615_63453917_63453975_63454379_63454474_63454889_63454969_63508527_63508571_63523128
H1_mix_00003591	chr1	-	961	9	FSM	ENSG00000142856.17	ENST00000271002.15	961	9	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_2	90.3949666740356	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGTAGAACTCTGTGT	-19	True	NA	-10	True	AATAAA	-19	NA	63523225	63440769	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_63441104_63446805_63446857_63453917_63453975_63454379_63454474_63454889_63454969_63478763_63478834_63490082_63490219_63508527_63508571_63523128
H1_mix_00003592	chr1	-	717	7	NIC	ENSG00000142856.17	novel	1044	10	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_5	174.855575324958	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTTTGGTAGAACTCTG	16	True	NA	-13	True	AATAAA	-16	NA	63523190	63440772	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_63441104_63446805_63446857_63453917_63453975_63454379_63454474_63454889_63454969_63508527_63508571_63523128
H1_mix_00003593	chr1	-	1044	10	FSM	ENSG00000142856.17	ENST00000371092.7	1044	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	195.309314665383	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTTTGGTAGAACTCTG	12	True	NA	-13	True	AATAAA	-16	NA	63523194	63440772	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_63441104_63446805_63446857_63453917_63453975_63454379_63454474_63454889_63454969_63478763_63478834_63490082_63490219_63508527_63508571_63510064_63510182_63523128
H1_mix_00003594	chr1	-	1270	10	FSM	ENSG00000142856.17	ENST00000489099.5	1285	10	15	0	15	0	multi-exon	FALSE	canonical	3	101	junction_3	153.269390854272	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTTTGGTAGAACTCTG	NA	False	NA	-13	True	AATAAA	-16	NA	63523487	63440772	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_63441104_63446805_63446857_63447564_63447615_63453917_63453975_63454379_63454474_63454889_63454969_63478763_63478834_63490082_63490219_63508527_63508571_63523128
H1_mix_00003596	chr1	-	5092	25	FSM	ENSG00000162434.13	ENST00000342505.5	5092	25	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_8	14.6765473346651	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCATATGCCTTTTAATA	-21	True	NA	-6	True	AATAAA	-17	NA	64966549	64833228	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_64834658_64835395_64835507_64836097_64836216_64837931_64838105_64838464_64838590_64839602_64839796_64841244_64841340_64841450_64841602_64844063_64844216_64844753_64844890_64845512_64845641_64846648_64846737_64847531_64847676_64850803_64850911_64855508_64855699_64857655_64857780_64860104_64860263_64864786_64864973_64866865_64867209_64869310_64869475_64873369_64873524_64879024_64879149_64883276_64883476_64886258_64886342_64966332
H1_mix_00003601	chr1	-	6417	12	FSM	ENSG00000116704.8	ENST00000235345.6	6193	12	-248	24	-248	-24	multi-exon	FALSE	canonical	3	15	junction_10	5.04197259049529	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAAAATTCCTTTGTAAC	-14	True	NA	-33	True	AATAAA	-21	NA	67054396	66999373	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_67004449_67009084_67009168_67020368_67020448_67021534_67021603_67042235_67042329_67047264_67047368_67049781_67049851_67050432_67050505_67052011_67052080_67052770_67052858_67052955_67052990_67053810
H1_mix_00003603	chr1	-	6681	8	FSM	ENSG00000142864.15	ENST00000361219.11	6681	8	0	0	0	0	multi-exon	FALSE	canonical	3	1726	junction_5	830.867999536064	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTATATTGAATTCTTT	0	True	NA	-5	True	AGTAAA	-21	NA	67430402	67407809	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_67413264_67415165_67415340_67420008_67420187_67424199_67424278_67424887_67424978_67425082_67425224_67426134_67426286_67429987
H1_mix_00003605	chr1	-	3482	8	FSM	ENSG00000142864.15	ENST00000370995.6	3482	8	0	0	0	0	multi-exon	FALSE	canonical	3	1087	junction_4	1147.13107981857	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAATCAAATAGGATC	31	False	NA	-32	True	AATAAA	-34	NA	67430386	67411037	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_67413264_67415165_67415340_67420008_67420187_67424199_67424323_67424887_67424978_67425082_67425224_67426134_67426286_67429987
H1_mix_00003606	chr1	-	1651	8	FSM	ENSG00000142864.15	ENST00000370990.5	1621	8	-30	0	0	0	multi-exon	FALSE	canonical	3	1087	junction_4	1128.55848093839	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTTTCACTTCATTTG	0	True	NA	NA	False	AATATA	-24	NA	67430402	67412866	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_67413264_67415165_67415340_67420008_67420187_67424199_67424323_67424887_67424960_67425082_67425224_67426134_67426286_67429987
H1_mix_00003608	chr1	-	4399	4	FSM	ENSG00000172380.6	ENST00000370982.4	4395	4	0	-4	0	4	multi-exon	FALSE	canonical	3	319	junction_2	8.05536398239638	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCCCTTTCCCTTCCTT	-5	True	NA	-21	True	AATAAA	-19	NA	67833467	67701470	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_67705577_67707593_67707713_67777457_67777508_67833343
H1_mix_00003609	chr1	-	2064	12	NIC	ENSG00000116729.14	novel	2037	12	NA	NA	-12	9	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	16.977379213491	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTACATCCATATTAACTC	-7	True	NA	-6	True	AATAAA	-26	NA	68232557	68098463	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_68098754_68137779_68137934_68144568_68144653_68145868_68146013_68148135_68148200_68148562_68148661_68150187_68150357_68153516_68153654_68155098_68155261_68159122_68159248_68193954_68194228_68232193
H1_mix_00003610	chr1	-	2716	12	FSM	ENSG00000116729.14	ENST00000262348.9	2716	12	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_10	7.99379924981113	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACATGCGTGCAGATTAT	-1	True	NA	-3	True	NA	NA	NA	68232523	68125359	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_68126336_68137779_68137934_68144568_68144653_68145868_68146013_68148135_68148200_68148562_68148661_68150187_68150357_68153516_68153654_68155098_68155261_68159122_68159248_68193954_68194228_68232193
H1_mix_00003613	chr1	-	5021	11	NIC	ENSG00000024526.17	novel	5299	12	NA	NA	12	0	intron_retention	FALSE	canonical	3	34	junction_10	55.8355621445688	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTTTCTTGTGTCTCA	5	True	NA	-9	True	ATTAAA	-17	NA	68497070	68474151	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_68477070_68477786_68477973_68479143_68479321_68481439_68481613_68482045_68482898_68483949_68484091_68486936_68486985_68488373_68488505_68488915_68489035_68489451_68489609_68496951
H1_mix_00003615	chr1	-	4485	11	FSM	ENSG00000024526.17	ENST00000370966.9	4586	11	101	0	-38	0	multi-exon	FALSE	canonical	3	12	junction_4	65.0984638835664	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTTTCTTGTGTCTCA	4	False	NA	-9	True	ATTAAA	-17	NA	68497120	68474151	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_68477070_68477786_68477973_68479143_68479321_68481439_68481613_68483949_68484091_68486936_68486985_68488373_68488505_68488915_68489035_68489451_68489609_68494429_68494696_68496951
H1_mix_00003617	chr1	-	3616	12	NIC	ENSG00000024526.17	novel	5299	12	NA	NA	20	-8	intron_retention	FALSE	canonical	1	2	junction_6	90.0384674449466	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGTTCTCATTTCTCAA	13	True	NA	-8	True	AATAAA	-15	NA	68497062	68475581	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_68477070_68477786_68477973_68479143_68479321_68481439_68481613_68482045_68482898_68483272_68483306_68483949_68484091_68486936_68486985_68488373_68488505_68488915_68489035_68489451_68489609_68496951
H1_mix_00003619	chr1	-	2563	13	NIC	ENSG00000066557.6	novel	2843	15	NA	NA	24	0	combination_of_known_splicesites	TRUE	canonical	3	12	junction_12	88.1032774645756	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAATGTTTATGTTTTCA	10	True	NA	NA	False	AATAAA	-23	NA	70205555	70144804	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_70145906_70148486_70148673_70151127_70151206_70152432_70152544_70155688_70155797_70159329_70159439_70173464_70173511_70173621_70173710_70175809_70175983_70178850_70178994_70181085_70181210_70184784_70184915_70205389
H1_mix_00003622	chr1	-	6293	6	NIC	ENSG00000118454.13	novel	3327	12	NA	NA	11071	15	combination_of_known_splicesites	FALSE	canonical	3	39	junction_1	73.4863252585132	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACTGTTCAGCGTATTA	NA	False	NA	-1	True	AATAAA	-35	NA	70302719	70258983	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_70262848_70274719_70274819_70276764_70276845_70292387_70292550_70296129_70296262_70300763
H1_mix_00003623	chr1	-	5674	13	FSM	ENSG00000118454.13	ENST00000370944.9	5658	13	0	-16	0	16	multi-exon	FALSE	canonical	3	161	junction_8	22.3619220004801	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTGTTCAGCGTATTAT	-9	True	NA	0	True	AATAAA	-36	NA	70354722	70258982	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_70262848_70270855_70270957_70274719_70274819_70276764_70276845_70292387_70292550_70296129_70296262_70300763_70300909_70306223_70306291_70313744_70313791_70315480_70315567_70324852_70324958_70336057_70336100_70353978
H1_mix_00003624	chr1	-	5544	12	NIC	ENSG00000118454.13	novel	5658	13	NA	NA	9	-4	combination_of_known_splicesites	FALSE	canonical	3	39	junction_1	52.6926218430457	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACAAGCTGGTTCAGCAT	0	True	NA	-20	True	AATAAA	-16	NA	70354713	70259002	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_70262848_70274719_70274819_70276764_70276845_70292387_70292550_70296129_70296262_70300763_70300909_70306223_70306291_70313744_70313791_70315480_70315567_70324852_70324958_70336057_70336100_70353978
H1_mix_00003625	chr1	-	809	4	FSM	ENSG00000118454.13	ENST00000464236.1	809	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	95.5835876195397	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACATTTATAAATATTCCT	NA	False	NA	NA	False	TTTAAA	-21	NA	70276843	70262273	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_70262804_70270855_70270957_70274719_70274819_70276764
H1_mix_00003628	chr1	-	3691	2	FSM	ENSG00000132485.14	ENST00000477096.1	3677	2	0	-14	0	8	multi-exon	FALSE	canonical	3	624	junction_1	0	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATTTTTAAACTAATTACA	NA	False	NA	5	True	AATAAA	-30	NA	71067513	71063282	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_71065138_71065677
H1_mix_00003629	chr1	-	2824	10	FSM	ENSG00000132485.14	ENST00000370920.8	2816	10	0	-8	0	8	multi-exon	TRUE	canonical	3	363	junction_1	230.610997350008	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATTTTTAAACTAATTACA	-8	True	NA	5	True	AATAAA	-30	NA	71081035	71063282	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_71065138_71066775_71066935_71069275_71069363_71070826_71070997_71072120_71072256_71072471_71072549_71076794_71076878_71078456_71078566_71078655_71078709_71080939
H1_mix_00003630	chr1	-	2821	11	FSM	ENSG00000132485.14	ENST00000254821.10	2821	11	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_2	207.628249523036	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTGGTGTTTGTTAGAA	16	True	NA	-10	True	AATAAA	-17	NA	71081011	71063336	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_71065138_71065677_71065753_71066775_71066935_71069275_71069363_71070826_71070997_71072120_71072256_71072471_71072549_71076794_71076878_71078456_71078566_71078655_71078709_71080939
H1_mix_00003631	chr1	-	481	3	FSM	ENSG00000132485.14	ENST00000479947.1	470	3	0	-11	0	0	multi-exon	FALSE	canonical	3	510	junction_2	57	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAGTGCATGAAGCATAT	NA	False	NA	-24	True	ATTAAA	-23	NA	71067086	71065042	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_71065138_71065677_71065753_71066775
H1_mix_00003634	chr1	-	9116	7	FSM	ENSG00000172260.15	ENST00000357731.10	12613	7	0	3497	0	-3497	multi-exon	FALSE	canonical	0	0	junction_1	3.54338193757822	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATACTGACATGGAGAAAA	1173	False	72282565	NA	False	NA	NA	NA	72282539	71399439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_71407571_71592816_71592969_71611025_71611147_71698007_71698140_71776171_71776298_71935078_71935312_72282318
H1_mix_00003635	chr1	-	3553	2	FSM	ENSG00000162620.16	ENST00000463724.1	3614	2	61	0	61	0	multi-exon	FALSE	canonical	2	5	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAATTAAATAGAA	76	False	NA	NA	False	GATAAA	-28	NA	74198086	74180222	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_74183685_74197995
H1_mix_00003636	chr1	-	2871	10	FSM	ENSG00000116791.14	ENST00000417775.5	2301	10	390	-960	0	952	multi-exon	FALSE	canonical	3	41	junction_9	128.472603603038	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACCAAATTGGTCAGCACC	13	True	NA	61	True	NA	NA	NA	74733018	74704529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_74706458_74706898_74706995_74707102_74707205_74710097_74710248_74714578_74714631_74719208_74719373_74723117_74723271_74724710_74724835_74730381_74730421_74732955
H1_mix_00003638	chr1	-	1912	9	FSM	ENSG00000116791.14	ENST00000340866.10	1908	9	0	-4	0	0	multi-exon	FALSE	canonical	3	307	junction_2	29.8137447329248	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCTAGTTTTTATATTA	-19	True	NA	-19	True	AATAAA	-23	NA	74733050	74705481	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_74706458_74706898_74706995_74707102_74707205_74710097_74710248_74714578_74714631_74719208_74719373_74723117_74723271_74724710_74724835_74732955
H1_mix_00003641	chr1	-	546	2	Intergenic	novelGene_64	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGGGCTGGGGGATGGTC	NA	False	NA	NA	False	NA	NA	NA	75383450	75377499	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_-_75378008_75383412
H1_mix_00003642	chr1	-	1466	1	FSM	ENSG00000230863.3	ENST00000446582.2	742	1	-414	-310	-414	142	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCAACTTATGGGTTCTA	NA	False	NA	NA	False	NA	NA	NA	75642501	75641035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_75641000_75642500
H1_mix_00003644	chr1	-	4608	11	FSM	ENSG00000142892.15	ENST00000370812.8	4601	11	1	-8	0	8	multi-exon	FALSE	canonical	3	173	junction_7	35.0279888089511	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGCAGTGTCATTCTTGT	-11	True	NA	-1	True	ATTAAA	-26	NA	77219429	77088980	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_77092491_77122274_77122360_77154448_77154622_77161294_77161406_77161593_77161712_77163845_77163943_77166718_77166831_77169259_77169396_77206639_77206732_77210435_77210490_77219309
H1_mix_00003645	chr1	-	8942	15	NIC	ENSG00000036549.13	novel	6412	15	NA	NA	0	2449	combination_of_known_junctions	TRUE	canonical	3	141	junction_8	41.7505346415725	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCTTCCATTTATTTT	-13	True	NA	-6	True	AATAAA	-15	NA	77683419	77559966	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_77565785_77566080_77566182_77568331_77568467_77576067_77576221_77578773_77578870_77579526_77579629_77580997_77581070_77581775_77581889_77581978_77582127_77584516_77584656_77631849_77633406_77639448_77639603_77641383_77641447_77641521_77641656_77683261
H1_mix_00003647	chr1	-	4500	11	FSM	ENSG00000036549.13	ENST00000481346.5	4500	11	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_8	43.2249927703869	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAAGTTTGAAGCCTGT	4783	False	NA	-5	True	TATAAA	-19	NA	77631921	77562415	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_77565785_77566080_77566182_77568331_77568467_77576067_77576221_77578773_77578870_77579526_77579629_77580997_77581070_77581775_77581889_77581978_77582127_77584516_77584656_77631849
H1_mix_00003648	chr1	-	6412	15	FSM	ENSG00000036549.13	ENST00000370801.8	6412	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	71.3748726722478	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAAGTTTGAAGCCTGT	1	True	NA	-5	True	TATAAA	-19	NA	77682658	77562415	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_77565785_77566080_77566182_77568331_77568467_77576067_77576221_77578773_77578870_77579526_77579629_77580997_77581070_77581775_77581892_77581978_77582127_77584516_77584656_77631849_77633406_77639448_77639603_77641383_77641447_77641521_77641656_77682584
H1_mix_00003649	chr1	-	6495	15	NIC	ENSG00000036549.13	novel	6412	15	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	173	junction_8	36.7640713030468	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAAGTTTGAAGCCTGT	-12	True	NA	-5	True	TATAAA	-19	NA	77683418	77562415	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_77565785_77566080_77566182_77568331_77568467_77576067_77576221_77578773_77578870_77579526_77579629_77580997_77581070_77581775_77581892_77581978_77582127_77584516_77584656_77631849_77633406_77639448_77639603_77641383_77641447_77641521_77641656_77683261
H1_mix_00003651	chr1	-	6967	4	FSM	ENSG00000036549.13	ENST00000414381.5	561	4	-29	-6377	0	6313	multi-exon	FALSE	canonical	3	17	junction_2	91.4925619320439	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGCTGTAGCTTGATTT	3	True	NA	NA	False	AATAAA	-15	NA	77683403	77626868	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_77633406_77639448_77639603_77641521_77641656_77683261
H1_mix_00003653	chr1	-	420	2	FSM	ENSG00000036549.13	ENST00000458763.2	420	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAATTCTGTTTGTTTAG	-16	True	NA	NA	False	AATAAA	-9	NA	77682675	77676981	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_77677311_77682584
H1_mix_00003654	chr1	-	2870	14	FSM	ENSG00000077254.14	ENST00000481579.5	2866	14	0	-4	0	0	multi-exon	FALSE	canonical	3	27	junction_2	99.1819199977388	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAATGTTGAATTTATTT	1032	False	NA	-4	True	AATAAA	-21	NA	77728336	77695986	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_77697475_77697862_77697932_77711746_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721926_77722023_77722197_77723330_77723444_77725621_77725763_77728294
H1_mix_00003655	chr1	-	4327	24	FSM	ENSG00000077254.14	ENST00000370794.7	4327	24	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_11	57.5423243589238	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAATGTTGAATTTATTT	18	False	77759870	-4	True	AATAAA	-21	NA	77759852	77695986	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_77697475_77697862_77697932_77701368_77701472_77711746_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721926_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77759642
H1_mix_00003656	chr1	-	4506	25	FSM	ENSG00000077254.14	ENST00000370793.5	4502	25	0	-4	0	0	multi-exon	FALSE	canonical	3	165	junction_24	73.196652928942	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAATGTTGAATTTATTT	18	False	77759870	-4	True	AATAAA	-21	NA	77759852	77695986	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_77697475_77697862_77697932_77701368_77701472_77711746_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721926_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77745420_77745600_77759642
H1_mix_00003659	chr1	-	606	2	FSM	ENSG00000077254.14	ENST00000533928.1	606	2	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTAGTCTGCAGATTCATG	NA	False	NA	NA	False	NA	NA	NA	77701651	77697608	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_77697932_77701368
H1_mix_00003660	chr1	-	2926	22	FSM	ENSG00000077254.14	ENST00000370792.7	2917	22	0	-9	0	9	multi-exon	FALSE	canonical	3	157	junction_8	77.703722438025	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATTTCAAGTGTTCTAGG	18	False	77759870	NA	False	AATAAA	-24	NA	77759852	77711642	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721902_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77745420_77745600_77759642
H1_mix_00003661	chr1	-	2912	22	ISM	ENSG00000077254.14	ENST00000370793.5	4502	25	42	15648	1	13	5prime_fragment	FALSE	canonical	3	165	junction_21	71.2346255839544	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAAGTGTTCTAGGTGCA	18	True	NA	NA	False	AATAAA	-28	NA	77759810	77711638	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721926_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77745420_77745600_77759642
H1_mix_00003662	chr1	-	2841	22	NNC	ENSG00000077254.14	novel	2917	22	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	99.8358062451382	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGTAATAGATTTCAAG	-16	True	NA	NA	False	AATAAA	-15	NA	77759778	77711651	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721902_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77745420_77745598_77759642
H1_mix_00003663	chr1	-	2717	21	ISM	ENSG00000077254.14	ENST00000370794.7	4327	24	45	15665	4	0	5prime_fragment	FALSE	canonical	3	226	junction_8	48.4564495191301	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGTAATAGATTTCAAG	21	True	NA	NA	False	AATAAA	-15	NA	77759807	77711651	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721926_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77759642
H1_mix_00003664	chr1	-	2696	21	NIC	ENSG00000077254.14	novel	2917	22	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	157	junction_8	58.8082477208767	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGTAATAGATTTCAAG	18	True	NA	NA	False	AATAAA	-15	NA	77759810	77711651	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721902_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77759642
H1_mix_00003670	chr1	-	6715	20	NNC	ENSG00000162613.17	novel	6714	20	NA	NA	1	5	intron_retention	TRUE	canonical	2	16	junction_3	242.291747401198	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCTTTGTGTTTTTTAT	0	True	NA	NA	False	AATAAA	-25	NA	77979071	77944049	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_77948775_77949154_77949301_77955254_77955327_77956571_77956701_77960183_77960264_77960343_77960496_77962769_77962931_77963573_77963716_77964061_77964163_77964253_77964357_77964645_77964748_77964869_77964969_77965068_77965232_77966693_77966752_77966883_77966956_77967048_77967102_77967626_77967667_77968164_77968204_77969924_77970016_77978884
H1_mix_00003673	chr1	-	2201	21	FSM	ENSG00000162613.17	ENST00000294623.8	2201	21	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	266.404105636531	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTCCCTGTGAGGTTTT	-16	True	NA	NA	False	AATAAA	-17	NA	77979087	77946481	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_77946577_77947452_77947553_77949154_77949301_77955254_77955330_77956571_77956701_77960183_77960264_77960343_77960496_77962769_77962931_77963573_77963716_77964061_77964163_77964253_77964357_77964645_77964748_77964869_77964969_77965068_77965232_77966693_77966752_77966883_77966956_77967048_77967099_77967626_77967667_77968164_77968204_77969924_77970016_77978884
H1_mix_00003674	chr1	-	4319	20	NNC	ENSG00000162613.17	novel	2201	21	NA	NA	0	0	intron_retention	FALSE	canonical	2	16	junction_3	210.424646503103	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTCCCTGTGAGGTTTT	-5	True	NA	NA	False	AATAAA	-17	NA	77979110	77946481	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_77948775_77949154_77949301_77955254_77955327_77956571_77956701_77960183_77960264_77960343_77960496_77962769_77962931_77963573_77963716_77964061_77964163_77964253_77964357_77964645_77964748_77964869_77964969_77965068_77965232_77966693_77966752_77966883_77966956_77967048_77967099_77967626_77967667_77968164_77968204_77969924_77970016_77978884
H1_mix_00003675	chr1	-	802	9	FSM	ENSG00000162613.17	ENST00000421641.1	802	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	337.711322729932	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTGTTATTTTTGTGAAA	-5	True	NA	NA	False	ATTAAA	-10	NA	77979110	77965068	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_77965232_77966693_77966752_77966883_77966956_77967048_77967099_77967626_77967667_77968164_77968204_77969021_77969085_77969924_77970016_77978884
H1_mix_00003676	chr1	-	230	1	FSM	ENSG00000273338.1	ENST00000608684.1	209	1	0	-21	0	21	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTAGTTATTTCTAGTAT	-1	True	NA	NA	False	AGTAAA	-22	NA	78004554	78004324	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_78004300_78004600
H1_mix_00003680	chr1	-	381	2	Intergenic	novelGene_69	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTTGGCTTGGGCTCAG	NA	False	NA	NA	False	NA	NA	NA	81251167	81245312	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_-_81245399_81250872
H1_mix_00003681	chr1	-	837	2	Intergenic	novelGene_75	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	23	junction_1	0	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	NA	False	NA	-6	True	ATTAAA	-16	NA	82360347	82354610	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_-_82355113_82360012
H1_mix_00003682	chr1	-	1882	2	Antisense	novelGene_ENSG00000230817.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATGAACATTGGGAATTT	NA	False	NA	NA	False	AATAAA	-21	NA	83182205	83019582	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr1_-_83021429_83182169
H1_mix_00003683	chr1	-	7976	21	FSM	ENSG00000137941.17	ENST00000260505.13	7980	21	0	4	0	0	multi-exon	FALSE	canonical	2	9	junction_17	5.77472943089111	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTACAATATGTCATCAAAT	6	True	NA	NA	False	AATAAA	-19	NA	83999132	83865027	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_83870083_83882962_83883137_83890320_83890482_83904078_83904160_83906328_83906464_83907455_83907662_83911164_83911364_83917603_83917691_83919698_83919835_83921086_83921161_83921246_83921395_83929135_83929231_83933607_83933767_83937851_83938017_83942462_83942680_83947123_83947283_83948627_83948696_83949864_83949987_83951844_83951977_83952186_83952388_83998930
H1_mix_00003684	chr1	-	1606	1	FSM	ENSG00000271576.1	ENST00000605506.1	1601	1	-6	1	-6	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGTTGTGTGCATAATTT	16	False	NA	-18	True	AATAAA	-18	NA	84077937	84076331	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_84076300_84077900
H1_mix_00003686	chr1	-	924	3	FSM	ENSG00000174021.12	ENST00000370641.3	920	3	0	-4	0	0	multi-exon	FALSE	canonical	3	3234	junction_2	84	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGCATTATTATTGGT	46	False	NA	-14	True	AATAAA	-18	NA	84506565	84498324	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_84498549_84501825_84501971_84506010
H1_mix_00003687	chr1	-	806	4	FSM	ENSG00000174021.12	ENST00000370645.9	806	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	1564.68129520217	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGCATTATTATTGGT	-4	True	NA	-14	True	AATAAA	-18	NA	84506581	84498324	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_84498549_84501825_84501971_84506010_84506302_84506435
H1_mix_00003688	chr1	-	7224	7	FSM	ENSG00000117151.13	ENST00000370630.6	6571	7	0	-653	0	653	multi-exon	FALSE	canonical	3	52	junction_4	13.4339950209244	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGATGTTTGCCAGATT	6	True	NA	NA	False	NA	NA	NA	84574440	84548957	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_84555200_84563256_84563419_84563734_84563833_84565840_84566013_84569930_84570140_84570581_84570721_84574238
H1_mix_00003689	chr1	-	2887	6	FSM	ENSG00000117151.13	ENST00000477677.5	2892	6	5	0	5	0	multi-exon	FALSE	canonical	3	27	junction_4	21.9581419979014	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGATTGTAGAGATGTAT	-29	True	NA	-3	True	AATAAA	-23	NA	84574475	84553120	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_84555200_84563256_84563419_84563734_84563833_84565840_84566013_84570581_84570721_84574238
H1_mix_00003690	chr1	-	5614	14	FSM	ENSG00000117155.17	ENST00000342203.8	5752	14	0	138	0	-137	multi-exon	FALSE	canonical	3	119	junction_13	36.7101230738154	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTCAGTGACATATGAA	-3	True	NA	67	True	NA	NA	NA	84690461	84643843	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_84647608_84650361_84650528_84651882_84651998_84655831_84656006_84656347_84656485_84658317_84658469_84662197_84662376_84662454_84662531_84664416_84664553_84666121_84666233_84669680_84669894_84670645_84670816_84671176_84671309_84690370
H1_mix_00003691	chr1	-	5766	14	NIC	ENSG00000117155.17	novel	2457	15	NA	NA	0	-209	combination_of_known_junctions	FALSE	canonical	3	65	junction_13	49.1346417281278	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAAATGACTGGTTGAG	-10	True	NA	-5	True	ATTAAA	-17	NA	84690468	84643915	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_84647608_84650361_84650528_84651882_84651998_84655831_84656006_84656347_84656485_84658317_84658469_84662197_84662376_84662454_84662531_84664416_84664553_84666121_84666233_84669680_84669894_84670645_84670816_84671176_84671309_84690153
H1_mix_00003692	chr1	-	4933	14	NNC	ENSG00000117155.17	novel	5752	14	NA	NA	28	-770	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_4	55.014898466274	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTCCTTTTTCAGTCT	42	True	NA	-13	True	AGTAAA	-15	NA	84690416	84644476	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_84647608_84650361_84650528_84651882_84651998_84655831_84656003_84656347_84656485_84658317_84658469_84662197_84662376_84662454_84662531_84664416_84664553_84666121_84666233_84669680_84669894_84670645_84670816_84671176_84671309_84690370
H1_mix_00003696	chr1	-	2889	13	FSM	ENSG00000055732.13	ENST00000370589.7	2810	13	0	-79	0	79	multi-exon	FALSE	canonical	3	24	junction_4	4.74341649025257	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTATGTCTCACAGCGAA	-22	True	NA	NA	False	NA	NA	NA	85048500	85018002	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_85019258_85021069_85021277_85022069_85022193_85022298_85022401_85025938_85026089_85026171_85026285_85029105_85029206_85032695_85032793_85032871_85032957_85034097_85034252_85041009_85041178_85045132_85045363_85048395
H1_mix_00003697	chr1	-	1954	1	FSM	ENSG00000280099.1	ENST00000624216.1	1717	1	-240	3	-240	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTTATCTCTTTTTTAA	NA	False	NA	-23	True	AATAAA	-20	NA	85154443	85152489	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_85152500_85154400
H1_mix_00003700	chr1	-	3257	3	FSM	ENSG00000162642.14	ENST00000471115.6	3254	3	0	-3	0	3	multi-exon	FALSE	canonical	3	318	junction_2	116	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTCTGGTATGTCTT	-3	True	NA	-7	True	ATTAAA	-19	NA	85259662	85249949	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_85252703_85258523_85258723_85259357
H1_mix_00003701	chr1	-	3394	4	FSM	ENSG00000162642.14	ENST00000294661.8	3391	4	0	-3	0	3	multi-exon	FALSE	canonical	3	302	junction_2	109.77552854196	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTCTGGTATGTCTT	-13	True	NA	-7	True	ATTAAA	-19	NA	85259672	85249949	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_85252703_85258523_85258723_85258934_85259062_85259357
H1_mix_00003702	chr1	-	2847	3	FSM	ENSG00000142867.14	ENST00000648566.1	2833	3	0	-14	0	14	multi-exon	FALSE	canonical	3	105	junction_1	19	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGACTTCTACAAAGTC	-78	True	NA	NA	False	AATAAA	-32	NA	85276632	85265761	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_85267983_85270617_85270907_85276295
H1_mix_00003703	chr1	-	3939	6	FSM	ENSG00000153904.21	ENST00000284031.13	3939	6	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_2	13.8938835463667	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACAGTGTATGTCTCTTT	2	True	NA	-5	True	AATAAA	-20	NA	85465159	85318484	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_85321569_85324739_85324884_85350414_85350535_85351505_85351580_85358747_85358848_85464742
H1_mix_00003704	chr1	-	6203	10	FSM	ENSG00000117174.11	ENST00000370574.4	6203	10	0	0	0	0	multi-exon	TRUE	canonical	3	87	junction_2	9.82187028027092	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGGTAACCCCTGACTT	-17	True	NA	NA	False	AATAAA	-20	NA	85708433	85649416	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_85654099_85657846_85657972_85677235_85677314_85678700_85678782_85680835_85680905_85702156_85702261_85706077_85706164_85706248_85706356_85706441_85706508_85707628
H1_mix_00003705	chr1	-	366	4	FSM	ENSG00000171502.15	ENST00000496682.2	366	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	2.35702260395516	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTTTTAAAAATGATGCT	84	False	NA	NA	False	NA	NA	NA	86156943	86126091	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_86126215_86146118_86146184_86156340_86156472_86156896
H1_mix_00003706	chr1	-	4848	17	NIC	ENSG00000122417.15	novel	7560	18	NA	NA	0	707	combination_of_known_junctions	FALSE	canonical	3	63	junction_11	16.3396565141376	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCATTGGTTCTGCTTCA	48	False	NA	NA	False	ATTAAA	-15	NA	86396253	86346116	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_86348879_86352858_86352985_86354529_86354693_86354773_86354860_86356443_86356603_86358786_86358892_86360425_86360537_86371017_86371154_86372430_86372541_86376232_86376419_86382241_86382359_86382930_86383003_86383133_86383197_86384675_86384802_86385457_86385591_86386914_86387087_86396032
H1_mix_00003707	chr1	-	461	5	FSM	ENSG00000122417.15	ENST00000462648.5	461	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	45.102660675397	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAGAAGTCGGAAAATCAAA	6824	False	NA	10	True	NA	NA	NA	86355383	86348831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_86348879_86352858_86352985_86354529_86354693_86354773_86354860_86355344
H1_mix_00003708	chr1	-	4267	18	FSM	ENSG00000122417.15	ENST00000294678.6	4267	18	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	32.1047162075631	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTGTTAAACCTGATAA	21	True	NA	-16	True	AATAAA	-24	NA	86396280	86350093	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_86352209_86352858_86352985_86354529_86354693_86354773_86354860_86355344_86355384_86356443_86356603_86358786_86358892_86360425_86360537_86371017_86371154_86372430_86372541_86376232_86376419_86382241_86382359_86382930_86383003_86383133_86383197_86384675_86384802_86385457_86385591_86386914_86387087_86396032
H1_mix_00003712	chr1	-	1659	2	FSM	ENSG00000122417.15	ENST00000478286.2	1650	2	0	-9	0	9	multi-exon	FALSE	canonical	3	94	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGAGCTACTTTTGAACTAA	-22	True	NA	NA	False	AATAAA	-38	NA	86396323	86385718	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_86387087_86396032
H1_mix_00003713	chr1	-	238	1	FSM	ENSG00000261737.1	ENST00000565575.1	961	1	723	0	723	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTGTCTATTTTAGATC	1769	False	NA	NA	False	AATAAA	-16	NA	86703739	86703501	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_86703500_86703700
H1_mix_00003714	chr1	-	1837	5	FSM	ENSG00000183291.18	ENST00000331835.10	1542	5	-298	3	0	-3	multi-exon	FALSE	canonical	3	1127	junction_1	91.5027321996453	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTTCTGTGTGGTTCAA	NA	False	NA	-8	True	ATTAAA	-18	NA	86914424	86862447	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_86863606_86868052_86868103_86880661_86880726_86903280_86903449_86914027
H1_mix_00003715	chr1	-	1787	4	FSM	ENSG00000183291.18	ENST00000370554.5	1220	4	-290	-277	0	-3	multi-exon	FALSE	canonical	3	89	junction_1	576.557600476021	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTTCTGTGTGGTTCAA	NA	False	NA	-8	True	ATTAAA	-18	NA	86914424	86862447	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_86863606_86880661_86880726_86903280_86903449_86914027
H1_mix_00003716	chr1	-	832	5	FSM	ENSG00000237505.8	ENST00000657030.1	3363	5	0	2531	0	18	multi-exon	FALSE	canonical	0	0	junction_4	1.4142135623731	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTATGAATATGAAATAT	NA	False	NA	NA	False	AATAAA	-15	NA	88684916	88540284	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_88540660_88556903_88557049_88569986_88570196_88570809_88570860_88684863
H1_mix_00003717	chr1	-	1599	7	FSM	ENSG00000137947.12	ENST00000370500.10	1599	7	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_6	20.5993527406405	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTAGTGAGCTTATTG	-2	True	NA	1	True	ATTAAA	-18	NA	88891567	88852632	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_88853347_88857205_88857488_88859881_88860012_88860139_88860287_88863980_88864115_88887260_88887368_88891482
H1_mix_00003718	chr1	-	2008	14	FSM	ENSG00000137944.18	ENST00000260508.9	1815	14	-147	-46	0	40	multi-exon	FALSE	canonical	3	79	junction_12	60.1428280288981	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCCTCAACCACATCTAT	-20	True	NA	39	True	NA	NA	NA	88992776	88935732	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_88936246_88943004_88943092_88943349_88943424_88949090_88949278_88953062_88953153_88955148_88955226_88961166_88961288_88961380_88961507_88962058_88962146_88964828_88964979_88968669_88968815_88969408_88969468_88988251_88988352_88992584
H1_mix_00003719	chr1	-	1868	13	FSM	ENSG00000137944.18	ENST00000370491.7	1868	13	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_12	29.9085411435151	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGTTTCCACCATTGTG	-20	True	NA	-1	True	AATAAA	-23	NA	88992776	88935772	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_88936246_88943004_88943092_88943349_88943424_88949090_88949278_88953062_88953153_88955148_88955226_88961166_88961288_88961380_88961507_88962058_88962146_88964828_88964979_88968669_88968815_88969408_88969468_88992584
H1_mix_00003721	chr1	-	4801	2	FSM	ENSG00000213516.10	ENST00000321792.5	4799	2	0	-2	0	2	multi-exon	FALSE	canonical	3	50	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCGTAAATACTTTTCTT	-16	True	NA	-9	True	ATTAAA	-18	NA	88992772	88979453	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_88984067_88992584
H1_mix_00003722	chr1	-	5063	3	FSM	ENSG00000213516.10	ENST00000399794.6	5084	3	26	-5	26	2	multi-exon	FALSE	canonical	3	40	junction_1	31.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCGTAAATACTTTTCTT	0	True	NA	-9	True	ATTAAA	-18	NA	88992934	88979453	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_88984067_88988251_88988352_88992584
H1_mix_00003723	chr1	-	551	1	FSM	ENSG00000234518.2	ENST00000439531.1	483	1	-19	-49	-19	49	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATTTCATGATTGAGAGA	7760	False	NA	NA	False	AAGAAA	-15	NA	89104786	89104235	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_89104200_89104800
H1_mix_00003725	chr1	-	1305	3	FSM	ENSG00000231999.8	ENST00000526694.3	1323	3	7	11	-2	-11	multi-exon	FALSE	canonical	0	0	junction_1	1.5	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTCCTAAAGAATGTGAC	7	True	NA	NA	False	ATTAAA	-14	NA	89632916	89625975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_89626827_89632015_89632210_89632656
H1_mix_00003726	chr1	-	729	1	FSM	ENSG00000228175.3	ENST00000380526.2	729	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCGGGGCACAGGGCACCC	662	False	NA	NA	False	NA	NA	NA	89994321	89993592	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_89993600_89994300
H1_mix_00003727	chr1	-	3179	2	FSM	ENSG00000233593.11	ENST00000606660.1	2786	2	-26	-367	2	367	multi-exon	FALSE	canonical	3	7	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGGAAAAATATATAGGTC	-9	True	NA	NA	False	NA	NA	NA	90851644	90829179	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_90832197_90851482
H1_mix_00003728	chr1	-	519	1	FSM	ENSG00000232882.1	ENST00000420457.1	621	1	36	66	36	-66	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGGAGACAAGACCAACCA	NA	False	NA	NA	False	TATAAA	-25	NA	90893576	90893057	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_90893100_90893600
H1_mix_00003730	chr1	-	2060	4	FSM	ENSG00000122482.22	ENST00000347275.9	2036	4	0	-24	0	18	multi-exon	FALSE	canonical	3	83	junction_3	91.6854526204797	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCATTGGTGGTAATAG	27	True	NA	-3	True	AATAAA	-42	NA	91021457	90915279	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_90916991_90918051_90918155_90982309_90982371_91021272
H1_mix_00003731	chr1	-	5880	6	FSM	ENSG00000122482.22	ENST00000370440.5	5702	6	-140	-38	112	38	multi-exon	FALSE	canonical	3	83	junction_5	67.0390930726244	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACTTCAGGTTGTGTTTC	675	False	NA	17	True	ATTAAA	-40	NA	91021613	90915259	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_90916991_90918051_90918155_90937484_90938091_90938271_90941310_90982309_90982371_91021272
H1_mix_00003732	chr1	-	5802	6	FSM	ENSG00000122482.22	ENST00000337393.10	5541	6	-237	-24	0	18	multi-exon	FALSE	canonical	3	128	junction_5	52.0099990386464	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCATTGGTGGTAATAG	16	False	NA	-3	True	AATAAA	-42	NA	91022272	90915279	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_90916991_90918051_90918155_90937484_90938091_90938271_90941310_90982309_90982371_91021989
H1_mix_00003733	chr1	-	6103	6	NIC	ENSG00000122482.22	novel	5541	6	NA	NA	0	18	combination_of_known_splicesites	FALSE	canonical	3	36	junction_5	83.9928568391384	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCATTGGTGGTAATAG	16	False	NA	-3	True	AATAAA	-42	NA	91022272	90915279	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_90916991_90918051_90918155_90937484_90938091_90938271_90941310_90982309_90982371_91021688
H1_mix_00003734	chr1	-	2189	4	FSM	ENSG00000122482.22	ENST00000361321.5	1253	4	-48	-888	-48	1	multi-exon	FALSE	canonical	3	99	junction_2	81.7081527280003	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAACATTTCTTATTTTT	NA	False	NA	-20	True	AATAAA	-25	NA	91022320	90915296	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_90916991_90918051_90918155_90982309_90982371_91021989
H1_mix_00003735	chr1	-	6511	8	NNC	ENSG00000122482.22	novel	5541	6	NA	NA	-21	18	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_6	101.426760547215	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCATTGGTGGTAATAG	-5	True	NA	-3	True	AATAAA	-42	NA	91022293	90915279	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_90916991_90918051_90918155_90935407_90935531_90937484_90938091_90938271_90941310_90982309_90982371_91020636_91021202_91021989
H1_mix_00003737	chr1	-	820	2	FSM	ENSG00000122482.22	ENST00000495966.1	820	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACTGCAATTATATCATA	233	False	NA	NA	False	ATTAAA	-3	NA	91022055	91020447	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_91021202_91021989
H1_mix_00003740	chr1	-	769	3	FSM	ENSG00000174842.17	ENST00000471465.1	769	3	0	0	0	0	multi-exon	FALSE	canonical	3	424	junction_2	0.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCCATTATGATTCATT	NA	False	NA	-21	True	AATAAA	-18	NA	92248408	92246491	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_92246647_92247061_92247145_92247877
H1_mix_00003745	chr1	-	7610	18	NIC	ENSG00000067208.16	novel	7795	20	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_7	8.92955901606867	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTCCTTCAGCTTT	-14	True	NA	0	True	ATTAAA	-20	NA	92785103	92508695	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_92513971_92563641_92563738_92605306_92605403_92607580_92607728_92624175_92624335_92625793_92625935_92636201_92636337_92665938_92665993_92677157_92677219_92693801_92693900_92694298_92694389_92695309_92695454_92697859_92697986_92702140_92702216_92703394_92703620_92704554_92704745_92736397_92736628_92784835
H1_mix_00003750	chr1	-	5789	4	FSM	ENSG00000117500.13	ENST00000370282.8	5789	4	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_1	10.8730042868667	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCTCTCTCTCAAAATAT	3	True	NA	NA	False	AATAAA	-16	NA	93180413	93149741	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_93154889_93156299_93156484_93160128_93160227_93180053
H1_mix_00003751	chr1	-	3847	5	FSM	ENSG00000117500.13	ENST00000370290.7	3847	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	138.631480912526	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAATTAACTGCCAGT	627	False	NA	-17	True	AATAAA	-8	NA	93180516	93151857	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_93154889_93156299_93156484_93158814_93158886_93160128_93160227_93180053
H1_mix_00003753	chr1	-	214	1	FSM	ENSG00000225297.1	ENST00000426104.1	185	1	179	-208	179	208	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGAGAAGAGCTACAGCC	NA	False	NA	NA	False	AAGAAA	-11	NA	93199760	93199546	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_93199500_93199800
H1_mix_00003754	chr1	-	418	5	FSM	ENSG00000223745.8	ENST00000429859.5	418	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	4.60977222864644	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATAAAAAAATGGA	9196	False	NA	-40	True	NA	NA	NA	93337392	93264675	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_93264773_93305387_93305471_93324634_93324730_93325768_93325896_93337376
H1_mix_00003759	chr1	-	3229	12	FSM	ENSG00000137936.18	ENST00000260502.11	3229	12	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_5	8.75280356502612	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTACCTCTTAGCTACCTC	3	True	NA	43	True	ATTAAA	-22	NA	93681837	93561740	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_93562420_93567278_93567492_93567739_93567852_93571669_93571842_93576013_93576130_93582300_93582954_93584017_93584122_93588976_93589420_93592264_93592394_93642303_93642344_93674613_93674942_93681597
H1_mix_00003760	chr1	-	5885	7	FSM	ENSG00000067334.14	ENST00000436063.7	5896	7	0	11	0	-11	multi-exon	FALSE	canonical	3	774	junction_5	53.8052042092584	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGCAATTATTCTCATTG	-1	True	NA	NA	False	ATTAAA	-6	NA	93879206	93866294	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_93869945_93870682_93870793_93872071_93872237_93873118_93873215_93875644_93875784_93876267_93877863_93879076
H1_mix_00003762	chr1	-	5095	7	FSM	ENSG00000023909.10	ENST00000370238.8	4883	7	-219	7	-193	-7	multi-exon	FALSE	canonical	3	106	junction_1	11.1455023315337	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCCAAATCATAAAGCTATT	11	False	NA	-17	True	AATAAA	-17	NA	93909649	93885205	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_93889160_93894613_93894729_93896617_93896821_93897838_93897899_93901584_93901670_93904522_93904589_93909037
H1_mix_00003763	chr1	-	3008	6	FSM	ENSG00000023909.10	ENST00000615724.1	3008	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	46.3577393754268	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAGCGAGACTGCGTCTC	9	True	NA	NA	False	NA	NA	NA	93909456	93887033	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_93889160_93894613_93894729_93896617_93896821_93897838_93897899_93901584_93901670_93909037
H1_mix_00003766	chr1	-	1881	11	FSM	ENSG00000137962.13	ENST00000370217.3	2043	11	0	162	0	-162	multi-exon	FALSE	canonical	3	55	junction_7	5.74543296888929	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTATAAATTGTACATGG	2054	False	NA	NA	False	TATAAA	-43	NA	94237633	94202056	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_94202733_94202917_94202999_94203099_94203211_94203929_94203995_94205060_94205199_94205634_94205684_94208831_94208905_94209253_94209351_94220257_94220393_94231406_94231644_94237414
H1_mix_00003767	chr1	-	2285	5	FSM	ENSG00000117525.14	ENST00000370207.4	1879	5	-175	-231	-53	94	multi-exon	FALSE	canonical	3	15	junction_1	18.4594149419747	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGGTAGAAACCGGCAACC	NA	False	NA	NA	False	AAAACA	-5	NA	94541812	94529078	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_94530597_94533089_94533269_94535964_94536165_94540256_94540369_94541536
H1_mix_00003768	chr1	-	2309	6	FSM	ENSG00000117525.14	ENST00000334047.12	2298	6	0	-11	0	11	multi-exon	FALSE	canonical	3	35	junction_2	10.1666120217111	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTCTCAATGTTTTCTC	-3	True	NA	56	True	AATACA	-26	NA	94541759	94529161	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_94530597_94532320_94532481_94533089_94533269_94535964_94536165_94540256_94540369_94541536
H1_mix_00003769	chr1	-	1991	7	FSM	ENSG00000117519.16	ENST00000370206.9	1991	7	0	0	0	0	multi-exon	FALSE	canonical	3	3614	junction_1	241.144090166486	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAACCACAGGCTGATTA	3	True	NA	-6	True	AATAAA	-20	NA	94927110	94896956	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_94898084_94899370_94899518_94901668_94901786_94902120_94902259_94903121_94903189_94903402_94903525_94926837
H1_mix_00003770	chr1	-	9328	4	FSM	ENSG00000172339.10	ENST00000370205.6	9375	4	0	47	0	-47	multi-exon	FALSE	canonical	3	77	junction_3	10.6144555520604	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGAGATTTTTTTCCACT	1	True	NA	NA	False	NA	NA	NA	95072951	94974451	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_94983307_95027128_95027261_95064865_95065018_95072762
H1_mix_00003772	chr1	-	4423	23	FSM	ENSG00000188641.14	ENST00000370192.8	4423	23	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_15	4.07775663491015	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTCTTTTGCTGCCTCA	26	False	97921046	0	True	AATAAA	-21	NA	97921034	97077742	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_97079147_97082329_97082471_97098488_97098633_97193068_97193249_97234851_97234995_97305258_97305379_97306176_97306298_97373560_97373645_97382392_97382462_97450058_97450224_97515725_97515942_97549559_97549745_97573759_97573971_97593217_97593388_97595058_97595167_97679094_97679183_97691716_97691799_97699350_97699548_97721509_97721672_97740391_97740480_97828113_97828197_97883263_97883375_97920883
H1_mix_00003773	chr1	-	1754	6	FSM	ENSG00000188641.14	ENST00000306031.5	1779	6	20	5	5	-5	multi-exon	FALSE	canonical	0	0	junction_1	7.4027022093287	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAGAAAAGCTTTTTGTC	-15	True	NA	NA	False	ATTAAA	-19	NA	97921029	97719762	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_97720927_97721509_97721672_97740391_97740480_97828113_97828197_97883263_97883375_97920883
H1_mix_00003774	chr1	-	3978	6	FSM	ENSG00000117598.13	ENST00000263177.5	3983	6	0	5	0	-5	multi-exon	FALSE	canonical	3	30	junction_3	8	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATTTTGACTTTGTAAT	-10	True	NA	-3	True	AATAAA	-23	NA	99004861	98890249	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_98893105_98914785_98914921_98921881_98922059_98953069_98953321_98956608_98956742_99004434
H1_mix_00003775	chr1	-	4134	6	FSM	ENSG00000117598.13	ENST00000370188.7	4139	6	0	5	0	-5	multi-exon	FALSE	canonical	3	29	junction_1	8.59302042357633	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATTTTGACTTTGTAAT	-5	True	NA	-3	True	AATAAA	-23	NA	99005032	98890249	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_98893105_98914800_98914921_98921881_98922059_98953069_98953321_98956608_98956742_99004434
H1_mix_00003776	chr1	-	1060	2	FSM	ENSG00000117598.13	ENST00000534652.1	467	2	-590	-3	-42	3	multi-exon	FALSE	canonical	3	9	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAGACACTCTTGTTTCT	714	False	NA	NA	False	AATAAA	-21	NA	99005074	98990852	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_98991273_99004434
H1_mix_00003777	chr1	-	5417	1	Genic_Genomic	ENSG00000156869.14	novel	NA	NA	NA	NA	3708	586	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTAATGTACTGAACTGTAC	NA	False	NA	NA	False	NA	NA	NA	99708800	99703383	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_-_99703400_99708800
H1_mix_00003779	chr1	-	3855	17	FSM	ENSG00000156876.10	ENST00000287482.6	3848	17	0	-7	0	0	multi-exon	FALSE	canonical	3	59	junction_15	8.53828693298603	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATCAAGTACTTCAAAAC	4	True	NA	-28	True	AATAAA	-25	NA	100132930	100083562	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_100085435_100085535_100085631_100088138_100088237_100102954_100103084_100105766_100105904_100106911_100106994_100107373_100107554_100107627_100107718_100107809_100108005_100110291_100110484_100119017_100119138_100120393_100120460_100121377_100121550_100122379_100122485_100123209_100123290_100125881_100125943_100132749
H1_mix_00003780	chr1	-	3995	16	FSM	ENSG00000156876.10	ENST00000462159.1	3972	16	0	-23	0	23	multi-exon	TRUE	canonical	3	59	junction_14	8.29832647117611	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCATTTTTGTTTCTTT	-21	True	NA	-5	True	NA	NA	NA	100132955	100083539	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_100085435_100085535_100085631_100088138_100088237_100102954_100103084_100105766_100105904_100106911_100106994_100107373_100107554_100107627_100108005_100110291_100110484_100119017_100119138_100120393_100120460_100121377_100121550_100122379_100122485_100123209_100123290_100125881_100125943_100132749
H1_mix_00003782	chr1	-	10799	11	FSM	ENSG00000137992.15	ENST00000370132.8	10799	11	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_4	9.27415764368926	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTGTCTCCACTGTTGA	-4	True	NA	0	True	AATAAA	-20	NA	100249834	100186918	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_100196423_100206229_100206302_100206444_100206637_100210693_100210772_100214816_100214984_100215982_100216200_100218625_100218748_100230732_100230915_100235435_100235512_100240760_100240885_100249769
H1_mix_00003783	chr1	-	3637	3	FSM	ENSG00000224616.4	ENST00000665523.1	3637	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	7.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATAGATGCAGGAAAAGGA	-19	True	NA	NA	False	TTTAAA	-43	NA	100266152	100261862	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_100265248_100265814_100265918_100266003
H1_mix_00003784	chr1	-	2850	5	FSM	ENSG00000162694.14	ENST00000370113.7	2835	5	0	-15	0	0	multi-exon	FALSE	canonical	3	84	junction_4	119.742431911165	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGCAGACTCATGTTTTT	-16	True	NA	-6	True	AATAAA	-34	NA	100894812	100872371	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_100874431_100876793_100876865_100877475_100877904_100888752_100888865_100894632
H1_mix_00003785	chr1	-	2844	5	FSM	ENSG00000162694.14	ENST00000370114.8	2825	5	0	-19	0	0	multi-exon	FALSE	canonical	3	269	junction_4	41.7933906257915	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGCAGACTCATGTTTTT	-2	True	NA	-6	True	AATAAA	-34	NA	100894842	100872371	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_100874431_100876793_100876865_100877475_100877904_100888752_100888829_100894632
H1_mix_00003789	chr1	-	1769	8	FSM	ENSG00000117543.22	ENST00000370109.8	1768	8	0	-1	0	1	multi-exon	FALSE	canonical	3	251	junction_4	22.1091909967464	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTATAATTTTCTTCTT	-1	True	NA	1	True	AATAAA	-24	NA	101025784	100989621	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_100990632_100992636_100992741_100995109_100995150_101001466_101001588_101013709_101013819_101021640_101021766_101025308_101025467_101025682
H1_mix_00003790	chr1	-	1047	7	FSM	ENSG00000117543.22	ENST00000464270.5	1047	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	96.0601663310842	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGATGGTTTTATAAGTG	4	True	NA	NA	False	NA	NA	NA	101025815	100990222	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_100990632_100992636_100992741_100995109_100995150_101001466_101001545_101021640_101021766_101025308_101025467_101025682
H1_mix_00003791	chr1	-	547	4	FSM	ENSG00000117543.22	ENST00000476507.1	524	4	0	-23	0	23	multi-exon	FALSE	canonical	3	267	junction_1	24.0878023535196	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATGAATCATAAAACATAC	489	False	NA	NA	False	AATAAA	-45	NA	101025753	101013625	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_101013819_101021640_101021766_101025308_101025467_101025682
H1_mix_00003793	chr1	-	1044	1	FSM	ENSG00000183298.5	ENST00000431241.1	880	1	-80	-84	-80	84	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGGCAATTTTTTTTCT	0	True	NA	NA	False	AATAAA	-26	NA	101787299	101786255	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_101786300_101787300
H1_mix_00003794	chr1	-	7317	67	FSM	ENSG00000060718.22	ENST00000370096.9	7311	67	0	-6	0	0	multi-exon	FALSE	canonical	3	44	junction_51	18.6993515500677	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTCATTTTCTTTCTTAA	5	True	NA	1	True	AATAAA	-26	NA	103108522	102876466	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_102878166_102879682_102879917_102881696_102881766_102883198_102883312_102886806_102887057_102888576_102888631_102888722_102888759_102888865_102888920_102889454_102889563_102890450_102890505_102898124_102898179_102898665_102898774_102898940_102898995_102912158_102912213_102913636_102913691_102914351_102914406_102914703_102914812_102915630_102915685_102920310_102920365_102921517_102921572_102923335_102923390_102934448_102934557_102935059_102935114_102939034_102939089_102940326_102940435_102946848_102946957_102961865_102961920_102962175_102962266_102962652_102962761_102965486_102965541_102970218_102970273_102974829_102974884_102978707_102978753_102978859_102978914_102979059_102979105_102979381_102979436_102984137_102984192_102987632_102987741_102989517_102989572_102995863_102995909_102995988_102996043_102997079_102997125_102998309_102998364_103001924_103001970_103002427_103002482_103002746_103002792_103003214_103003269_103004443_103004489_103004607_103004662_103005837_103005892_103006067_103006122_103006261_103006316_103008462_103008517_103012412_103012470_103014510_103014595_103015667_103015743_103017819_103017883_103018817_103018860_103021706_103021770_103022741_103022997_103025520_103025614_103026215_103026333_103031115_103031245_103074617_103074781_103078657_103078872_103082804_103082973_103108072
H1_mix_00003795	chr1	-	5289	64	FSM	ENSG00000060718.22	ENST00000635193.1	5289	64	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_36	21.698406892627	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTAAGTCCCTTTCTTTG	27	False	NA	-12	True	AATAAA	-40	NA	103031213	102877484	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_102878166_102879682_102879917_102881696_102881766_102883198_102883312_102886806_102887057_102888576_102888631_102888722_102888759_102888865_102888920_102889454_102889563_102890450_102890505_102898124_102898179_102898665_102898774_102898940_102898995_102912158_102912213_102913636_102913691_102914351_102914406_102914703_102914812_102915630_102915685_102920310_102920365_102921517_102921572_102923335_102923390_102934448_102934557_102935059_102935114_102939034_102939089_102940326_102940435_102946848_102946957_102961865_102961920_102962175_102962266_102962652_102962761_102965486_102965541_102970218_102970273_102974829_102974884_102978707_102978753_102978859_102978914_102979059_102979105_102979381_102979436_102979596_102979613_102984137_102984192_102987632_102987741_102989517_102989572_102995863_102995909_102995988_102996043_102997079_102997125_102998309_102998364_103001924_103001970_103002427_103002482_103002746_103002792_103003214_103003269_103004443_103004489_103004607_103004662_103005837_103005892_103006067_103006122_103006261_103006316_103008462_103008517_103012412_103012470_103014510_103014595_103015667_103015743_103017819_103017883_103018817_103018860_103021706_103021770_103022741_103022997_103025520_103025614_103026215_103026333_103031115
H1_mix_00003796	chr1	-	5025	27	FSM	ENSG00000134215.16	ENST00000370056.9	5025	27	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_10	6.02128866271692	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTAAGAGTTGGAGTCTT	-39	True	NA	-8	True	AATAAA	-16	NA	107965180	107571160	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_107573373_107574046_107574199_107596211_107596342_107602396_107602485_107603046_107603164_107609930_107609966_107617566_107617633_107642618_107642756_107683487_107683534_107688380_107688407_107704549_107704651_107704959_107705062_107748967_107749078_107749461_107749595_107751116_107751203_107755426_107755514_107757260_107757330_107760783_107760880_107765075_107765176_107766446_107766551_107768440_107768510_107770635_107770729_107772734_107772844_107777230_107777297_107779433_107779493_107874900_107875018_107964665
H1_mix_00003798	chr1	-	3498	11	NNC	ENSG00000085491.17	novel	4249	10	NA	NA	0	21101	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	110.142816379463	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACTGCTAACAAGTGACT	15	True	NA	NA	False	AAAAAG	-3	NA	108200343	108112941	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_108112971_108134822_108136838_108139057_108139209_108143542_108143711_108148278_108148387_108154982_108155136_108157461_108157621_108161181_108161294_108181940_108182029_108185827_108185955_108199955
H1_mix_00003799	chr1	-	4077	11	NNC	ENSG00000085491.17	novel	4249	10	NA	NA	-71	21101	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	110.142816379463	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACTGCTAACAAGTGACT	NA	False	NA	NA	False	AAAAAG	-3	NA	108200920	108112941	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_108112972_108134821_108136838_108139057_108139209_108143542_108143711_108148278_108148387_108154982_108155136_108157461_108157621_108161181_108161294_108181940_108182029_108185827_108185955_108199955
H1_mix_00003800	chr1	-	4249	10	FSM	ENSG00000085491.17	ENST00000565488.6	4249	10	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_8	37.8254601042574	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTACTTTACAGTATTT	15	True	NA	-11	True	AATAAA	-15	NA	108200343	108134042	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_108136838_108139057_108139209_108143542_108143711_108148278_108148387_108154982_108155136_108157461_108157621_108161181_108161294_108181940_108182029_108185827_108185955_108199955
H1_mix_00003801	chr1	-	1343	1	FSM	ENSG00000085491.17	ENST00000569674.1	2357	1	-71	1085	-71	-1085	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTATAAAGGCGCACACA	NA	False	NA	NA	False	NA	NA	NA	108200920	108199577	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_108199600_108200900
H1_mix_00003802	chr1	-	3049	8	FSM	ENSG00000162639.16	ENST00000370032.9	1874	8	-1179	4	-1179	-4	multi-exon	FALSE	canonical	3	40	junction_7	11.1446884941955	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTTTGAACTTACCTAT	NA	False	NA	-9	True	AATAAA	-22	NA	108662705	108648298	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_108648992_108650210_108650389_108651029_108651210_108654715_108654851_108655585_108655699_108657450_108657580_108659863_108659963_108661183
H1_mix_00003803	chr1	-	1696	8	FSM	ENSG00000162639.16	ENST00000402983.5	1696	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_7	17.3569958841514	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTACCTATTTTTTTTGT	315	False	NA	0	True	AATAAA	-31	NA	108661122	108648289	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_108648992_108650210_108650389_108651029_108651210_108654715_108654851_108655585_108655699_108657450_108657580_108659863_108659963_108660962
H1_mix_00003804	chr1	-	4994	13	FSM	ENSG00000121940.17	ENST00000369969.7	4994	13	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_12	39.6347035086958	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCATAAAATTTTTCCTTT	-24	True	NA	NA	False	AAGAAA	-19	NA	108963484	108929504	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_108932502_108934624_108934943_108937076_108937419_108939635_108939783_108940044_108940143_108941404_108941499_108943474_108943616_108943835_108944058_108947610_108947719_108949819_108949922_108950308_108950449_108962308_108962470_108963360
H1_mix_00003805	chr1	-	4806	12	FSM	ENSG00000121940.17	ENST00000356970.6	4803	12	0	-3	0	0	multi-exon	FALSE	canonical	3	66	junction_11	26.4656334151691	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCATAAAATTTTTCCTTT	3	True	NA	NA	False	AAGAAA	-19	NA	108963457	108929504	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_108932502_108934624_108934943_108937076_108937419_108939635_108939783_108940044_108940143_108941404_108941499_108943474_108943616_108943835_108944058_108947610_108947719_108949819_108949922_108950308_108950449_108963360
H1_mix_00003806	chr1	-	2383	13	FSM	ENSG00000121940.17	ENST00000369970.8	2383	13	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	51.94842527824	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGTGAAGCTTTTAGGAAA	-44	True	NA	NA	False	NA	NA	NA	108963504	108931985	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_108932502_108934624_108934943_108937076_108937419_108939635_108939783_108940044_108940143_108941404_108941499_108943474_108943616_108943835_108943908_108947610_108947719_108949819_108949922_108950308_108950449_108962308_108962470_108963360
H1_mix_00003808	chr1	-	4238	15	FSM	ENSG00000085433.17	ENST00000369962.8	4226	15	0	-12	0	12	multi-exon	TRUE	canonical	3	19	junction_10	4.59813626840888	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTCTTTGGCTTTCAAA	15	True	NA	9	True	AATAAA	-32	NA	109042102	108970201	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_108971573_108974535_108974755_108981732_108981865_108982608_108982780_108983281_108983452_108986522_108986681_108991253_108991330_108995579_108995838_109002223_109002403_109004591_109004716_109010915_109011719_109013840_109013926_109017517_109017602_109023354_109023522_109041861
H1_mix_00003809	chr1	-	4252	15	FSM	ENSG00000085433.17	ENST00000369965.8	4240	15	0	-12	0	12	multi-exon	FALSE	canonical	2	4	junction_10	7.14607070568241	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTCTTTGGCTTTCAAA	4	True	NA	9	True	AATAAA	-32	NA	109042113	108970201	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_108971573_108974535_108974755_108981732_108981865_108982608_108982780_108983281_108983452_108986522_108986681_108991253_108991330_108995579_108995838_109002223_109002403_109004591_109004719_109010915_109011719_109013840_109013926_109017517_109017602_109023354_109023522_109041861
H1_mix_00003810	chr1	-	814	4	FSM	ENSG00000197780.11	ENST00000338366.6	814	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	5.09901951359278	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGCAGGCTGGAGTGCA	-24	True	NA	NA	False	NA	NA	NA	109076003	109064139	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_109064694_109066134_109066233_109074986_109075066_109075920
H1_mix_00003811	chr1	-	2887	1	FSM	ENSG00000273382.1	ENST00000608574.1	2888	1	-38	39	-38	-39	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAAGCTTTGTCTATAAA	-3	True	NA	NA	False	NA	NA	NA	109090896	109088009	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_109088000_109090900
H1_mix_00003812	chr1	-	6965	21	NNC	ENSG00000134243.12	novel	6990	20	NA	NA	0	87558	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	128.227639376228	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATATATATATATAT	74	False	NA	NA	False	NA	NA	NA	109397861	109222009	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_109222045_109309574_109314058_109314260_109314385_109314671_109314779_109316849_109316959_109317852_109317970_109322931_109323122_109324898_109325090_109326991_109327161_109327498_109327602_109336239_109336347_109340723_109340880_109342013_109342159_109345750_109345879_109347482_109347533_109350928_109351003_109354366_109354532_109355366_109355470_109367407_109367482_109369529_109369590_109397586
H1_mix_00003813	chr1	-	7065	21	NNC	ENSG00000134243.12	novel	6990	20	NA	NA	-40	87558	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	120.341015451923	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATATATATATATAT	NA	False	NA	NA	False	NA	NA	NA	109397958	109222009	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_109222045_109309574_109314058_109314260_109314385_109314671_109314779_109316849_109316959_109317852_109317970_109322931_109323122_109324898_109325090_109326991_109327161_109327498_109327602_109336239_109336347_109340723_109340880_109342013_109342159_109345750_109345882_109347482_109347533_109350928_109351003_109354366_109354532_109355366_109355470_109367407_109367482_109369529_109369590_109397586
H1_mix_00003815	chr1	-	1717	8	FSM	ENSG00000134222.16	ENST00000369907.7	1717	8	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_7	118.627181384644	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGGAAGTCGATCCTGC	7	True	NA	-11	True	AATAAA	-27	NA	109283147	109279555	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618_109282061_109282517_109282576_109282679_109282732_109283062
H1_mix_00003816	chr1	-	1743	8	FSM	ENSG00000134222.16	ENST00000369909.6	1742	8	0	-1	0	0	multi-exon	FALSE	canonical	3	154	junction_7	109.900882988412	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGGAAGTCGATCCTGC	-14	True	NA	-11	True	AATAAA	-27	NA	109283168	109279555	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618_109282061_109282517_109282576_109282679_109282737_109283062
H1_mix_00003817	chr1	-	1710	8	FSM	ENSG00000134222.16	ENST00000369903.6	1710	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	149.280997874916	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGAATGTATTTTTATA	-12	True	NA	-40	True	NA	NA	NA	109283122	109279584	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618_109282061_109282517_109282576_109282679_109282790_109283073
H1_mix_00003822	chr1	-	7000	20	FSM	ENSG00000134243.12	ENST00000256637.8	6990	20	0	-10	0	3	multi-exon	FALSE	canonical	3	269	junction_13	66.7819040959558	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTAAGCTACAGTTTGTT	-11	True	NA	-2	True	AATAAA	-34	NA	109397918	109309564	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_109314058_109314260_109314385_109314671_109314779_109316849_109316959_109317852_109317970_109322931_109323122_109324898_109325090_109326991_109327161_109327498_109327602_109336239_109336347_109340723_109340880_109342013_109342159_109345750_109345882_109347482_109347533_109350928_109351003_109354366_109354532_109355366_109355470_109367407_109367482_109369529_109369590_109397586
H1_mix_00003825	chr1	-	3821	9	FSM	ENSG00000143106.13	ENST00000271308.9	3815	9	0	-6	0	6	multi-exon	FALSE	canonical	3	1864	junction_8	187.902193640734	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATGACTTGCATATTTT	-16	True	NA	-3	True	ATTAAA	-23	NA	109426448	109399035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_109402091_109409927_109410015_109411010_109411114_109411876_109411936_109412076_109412185_109413067_109413136_109415236_109415364_109421859_109421927_109426301
H1_mix_00003826	chr1	-	5130	2	FSM	ENSG00000181754.7	ENST00000369864.5	5130	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	443	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATCTGACTGGTTTATTTT	-8	True	NA	-5	True	ATTAAA	-26	NA	109509727	109504177	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_109509000_109509419
H1_mix_00003827	chr1	-	4035	8	FSM	ENSG00000134202.12	ENST00000256594.7	4046	8	0	11	0	-6	multi-exon	FALSE	canonical	3	41	junction_7	7.8141681892442	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCACTCTCCATGTCCAT	547	False	NA	NA	False	AATAAA	-14	NA	109740516	109733942	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_109737170_109737456_109737568_109737655_109737752_109738090_109738192_109738284_109738367_109739428_109739494_109739832_109739909_109740239
H1_mix_00003828	chr1	-	766	3	FSM	ENSG00000168679.18	ENST00000467986.2	1059	3	0	293	0	-293	multi-exon	FALSE	canonical	1	1	junction_2	1	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACTCACTCCACCACCAAT	874	False	NA	NA	False	AAGAAA	-26	NA	110379183	110375328	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_110375552_110376949_110377162_110378852
H1_mix_00003830	chr1	-	1852	3	FSM	ENSG00000134248.14	ENST00000464240.1	1830	3	0	-22	0	22	multi-exon	FALSE	canonical	3	2266	junction_2	35.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCAAATGTTCCTTTTGT	-24	True	NA	-5	True	AATAAA	-43	NA	110407694	110401226	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_110401584_110403918_110404037_110406317
H1_mix_00003831	chr1	-	868	4	FSM	ENSG00000134248.14	ENST00000256644.8	868	4	0	0	0	0	multi-exon	FALSE	canonical	3	2079	junction_3	108.81891175506	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATCTTTTCTAGATTCTT	14	False	NA	-31	True	AATAAA	-17	NA	110407942	110401252	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_110401584_110403918_110404037_110406317_110406380_110407585
H1_mix_00003832	chr1	-	2181	1	FSM	ENSG00000177272.9	ENST00000369769.4	2476	1	211	84	211	-84	mono-exon	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGACTTAAATTCCTAT	258	False	NA	NA	False	NA	NA	NA	110674729	110672548	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_110672500_110674700
H1_mix_00003839	chr1	-	1957	10	NNC	ENSG00000156171.15	novel	2098	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_3	77.455363489776	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAAGAGCTTCTTAGATT	-5	True	NA	-8	True	AATAAA	-13	NA	111140093	111117332	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_111118268_111118804_111118898_111119876_111119960_111120531_111120694_111124741_111124882_111126226_111126295_111131423_111131569_111137522_111137587_111139500_111139712_111140037
H1_mix_00003840	chr1	-	2090	10	NIC	ENSG00000156171.15	novel	2098	10	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_9	56.334319517995	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAAGAGCTTCTTAGATT	NA	False	NA	-8	True	AATAAA	-13	NA	111140210	111117332	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_111118268_111118804_111118898_111119876_111119960_111120515_111120694_111124741_111124882_111126226_111126295_111131423_111131569_111137522_111137587_111139500_111139712_111140037
H1_mix_00003841	chr1	-	451	2	FSM	ENSG00000085465.13	ENST00000494622.1	482	2	31	0	31	0	multi-exon	FALSE	canonical	2	4	junction_1	0	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAGGCTGGGGTCACTGA	6893	False	NA	NA	False	NA	NA	NA	111416648	111415219	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_111415345_111416322
H1_mix_00003842	chr1	-	2456	10	FSM	ENSG00000116455.14	ENST00000235090.10	2456	10	0	0	0	0	multi-exon	FALSE	canonical	3	599	junction_1	51.3679536935886	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGATCCTCTGGCGT	-11	True	NA	1	True	AGTAAA	-16	NA	111449256	111439889	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_111441390_111442024_111442094_111442652_111442762_111443322_111443395_111443866_111443922_111444053_111444125_111447094_111447145_111447434_111447577_111448618_111448805_111449054
H1_mix_00003844	chr1	-	5951	2	FSM	ENSG00000197852.12	ENST00000357260.6	5951	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCCAGATTCCCTCTGAA	-11	True	NA	-6	True	AATAAA	-18	NA	111739395	111722063	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_111727805_111739185
H1_mix_00003845	chr1	-	4255	15	FSM	ENSG00000007341.19	ENST00000358039.9	4255	15	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_3	29.4143516269296	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTGTCTATTTGTGTAAT	-12	True	NA	NA	False	AATAAA	-31	NA	112619141	112523513	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_112526112_112541950_112542091_112550600_112550694_112555867_112556019_112576985_112577089_112578344_112578418_112581991_112582107_112582374_112582473_112583971_112584127_112591524_112591604_112597970_112598087_112600793_112600849_112610840_112611004_112616812_112616896_112618908
H1_mix_00003848	chr1	-	848	3	FSM	ENSG00000007341.19	ENST00000477332.5	848	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	5	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAAAGAGCCTTTGTTTA	596	False	NA	NA	False	AAGAAA	-31	NA	112619099	112607103	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_112607598_112610840_112611004_112618908
H1_mix_00003851	chr1	-	685	4	FSM	ENSG00000007341.19	ENST00000498383.5	685	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	62.230753383409	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGTTTGTGATATTTTGT	18	True	NA	0	True	AATAAA	-21	NA	112619111	112610454	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_112610691_112610840_112611004_112616812_112616896_112618908
H1_mix_00003852	chr1	-	838	3	ISM	ENSG00000007341.19	ENST00000467335.5	990	4	660	-4	-1	0	3prime_fragment	FALSE	canonical	3	120	junction_2	11.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGTTTGTGATATTTTGT	15	True	NA	0	True	AATAAA	-21	NA	112619114	112610454	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_112611004_112616812_112616896_112618908
H1_mix_00003853	chr1	-	384	1	FSM	ENSG00000235299.2	ENST00000414323.2	319	1	-73	8	-73	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGAGCCAAGAATGTGCT	NA	False	NA	NA	False	NA	NA	NA	112626297	112625913	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_112625900_112626300
H1_mix_00003855	chr1	-	1359	5	FSM	ENSG00000155366.17	ENST00000369642.7	1355	5	0	-4	0	0	multi-exon	FALSE	canonical	3	454	junction_4	132.524290226358	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCAGCTTTCGGTCTTT	8041	False	NA	-30	True	AATAAA	-20	NA	112707434	112701126	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_112701714_112702562_112702694_112702998_112703120_112703643_112703807_112707077
H1_mix_00003856	chr1	-	1028	6	FSM	ENSG00000155366.17	ENST00000369638.6	1028	6	0	0	0	0	multi-exon	FALSE	canonical	2	33	junction_4	338.937752397103	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCACTTTATACACTTCTG	-9	True	NA	NA	False	NA	NA	NA	112707135	112701274	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_112701714_112702562_112702694_112702998_112703120_112703643_112703807_112705052_112705169_112707077
H1_mix_00003857	chr1	-	943	3	FSM	ENSG00000155366.17	ENST00000473074.1	943	3	0	0	0	0	multi-exon	FALSE	canonical	3	760	junction_2	7	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCCTCAGGGCCCCTGG	4178	False	NA	NA	False	NA	NA	NA	112703653	112701337	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_112701714_112702562_112703120_112703643
H1_mix_00003858	chr1	-	2478	11	FSM	ENSG00000155367.16	ENST00000464951.1	2474	11	0	-4	0	0	multi-exon	FALSE	canonical	2	7	junction_8	86.5887406075409	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGTATTTGCTTTGA	18	True	NA	NA	False	AATAAA	-18	NA	112715291	112709993	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_112710311_112710459_112710612_112710743_112710852_112711007_112711072_112711265_112711385_112711970_112712056_112712344_112712458_112712743_112712804_112712920_112713032_112713496_112713612_112714057
H1_mix_00003859	chr1	-	2781	9	NIC	ENSG00000155367.16	novel	2474	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	44	junction_8	64.9604446952143	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGTATTTGCTTTGA	-19	True	NA	NA	False	AATAAA	-18	NA	112715328	112709993	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_112710612_112710743_112710852_112711007_112711072_112711265_112711385_112711970_112712056_112712344_112712458_112712743_112713032_112713496_112713612_112714057
H1_mix_00003863	chr1	-	716	3	FSM	ENSG00000215866.9	ENST00000691250.1	700	3	-24	8	-24	0	multi-exon	FALSE	canonical	3	2036	junction_1	759	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGAACCTGTTTGGTGG	NA	False	NA	-27	True	AATAAA	-15	NA	112825765	112820177	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_112820539_112823652_112823755_112825512
H1_mix_00003864	chr1	-	1222	3	FSM	ENSG00000215866.9	ENST00000667852.1	1222	3	0	0	0	0	multi-exon	FALSE	canonical	3	1461	junction_1	1046.5	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGAACCTGTTTGGTGG	NA	False	NA	-27	True	AATAAA	-15	NA	112826268	112820177	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_112820542_112823652_112823755_112825512
H1_mix_00003865	chr1	-	3163	3	NNC	ENSG00000215866.9	novel	1222	3	NA	NA	-24	-1	at_least_one_novel_splicesite	FALSE	canonical	3	84	junction_1	1735	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACAGAACCTGTTTGGTG	NA	False	NA	-28	True	AATAAA	-14	NA	112825765	112820178	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_112822987_112823652_112823755_112825512
H1_mix_00003866	chr1	-	4798	5	FSM	ENSG00000155380.13	ENST00000369626.8	3753	5	-218	-827	-216	827	multi-exon	FALSE	canonical	3	1339	junction_2	121.073066782006	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTTACTCCATTTGAAGA	NA	False	NA	NA	False	NA	NA	NA	112956414	112911019	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_112914166_112917177_112918045_112921989_112922134_112929091_112929353_112956034
H1_mix_00003867	chr1	-	4379	5	FSM	ENSG00000155380.13	ENST00000538576.5	4374	5	0	-5	0	0	multi-exon	FALSE	canonical	3	12	junction_4	646.91860964112	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTTTTCCTCATCTTTA	276	False	NA	-14	True	AATAAA	-18	NA	112956063	112911846	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_112914166_112917177_112918045_112921989_112922134_112929091_112929353_112955275
H1_mix_00003868	chr1	-	2452	3	FSM	ENSG00000238198.2	ENST00000421157.2	2467	3	0	15	0	-15	multi-exon	FALSE	canonical	1	1	junction_2	0.5	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATATCATACATTGTGTTC	NA	False	NA	NA	False	AATAAA	-3	NA	113073113	113011701	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_113013840_113048422_113048562_113072938
H1_mix_00003869	chr1	-	4329	12	FSM	ENSG00000116793.16	ENST00000474926.5	4314	12	0	-15	0	15	multi-exon	FALSE	canonical	3	46	junction_3	79.3215029260432	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCCATGCCATGCCTCTGA	434	False	NA	NA	False	ATTAAA	-37	NA	113715212	113696815	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_113697726_113698261_113698388_113699703_113699800_113700793_113700950_113704080_113704168_113704665_113704798_113705889_113706163_113706593_113706723_113710253_113710476_113711745_113711836_113711939_113712114_113713278
H1_mix_00003870	chr1	-	3672	19	FSM	ENSG00000116793.16	ENST00000369604.6	3657	19	0	-15	0	15	multi-exon	FALSE	canonical	3	46	junction_3	65.082853177913	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCCATGCCATGCCTCTGA	22	True	NA	NA	False	ATTAAA	-37	NA	113759486	113696815	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_113697726_113698261_113698388_113699703_113699800_113700793_113700950_113704080_113704168_113704665_113704798_113705889_113706163_113706593_113706723_113710253_113710476_113711745_113711836_113711939_113712114_113713278_113713439_113724758_113724894_113726417_113726575_113738109_113738269_113738729_113738800_113757698_113757756_113758658_113758734_113759022
H1_mix_00003871	chr1	-	4332	13	NNC	ENSG00000116793.16	novel	3244	18	NA	NA	-7180	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_12	92.7917321508525	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTCTAGGTTTTCTTTGT	NA	False	NA	0	True	AATAAA	-22	NA	113722392	113697201	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_113697726_113698261_113698388_113699703_113699800_113700793_113700950_113704080_113704168_113704665_113704798_113705889_113706163_113706593_113706723_113710253_113710476_113711745_113711836_113711939_113712114_113713278_113715571_113722361
H1_mix_00003873	chr1	-	3399	19	NIC	ENSG00000116793.16	novel	3657	19	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	46	junction_3	70.9438353754417	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCAGTTTCTAGGTTTTC	19	True	NA	-5	True	AATAAA	-17	NA	113759489	113697206	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_113697726_113698261_113698388_113699703_113699800_113700793_113700950_113704080_113704168_113704665_113704798_113705889_113706163_113706593_113706723_113710253_113710476_113711745_113711836_113711939_113712114_113713278_113713439_113724758_113724894_113726417_113726575_113738109_113738269_113738729_113738800_113757698_113757756_113758658_113758849_113759022
H1_mix_00003874	chr1	-	3520	21	NNC	ENSG00000116793.16	novel	3657	19	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	84.9938821327747	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCAGTTTCTAGGTTTTC	33	True	NA	-5	True	AATAAA	-17	NA	113759475	113697206	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_113697726_113698261_113698388_113699703_113699800_113700192_113700244_113700793_113700950_113704080_113704168_113704665_113704798_113705889_113706163_113706593_113706723_113710253_113710476_113711745_113711836_113711939_113712114_113713278_113713439_113724758_113724894_113726417_113726575_113738109_113738269_113738729_113738800_113749505_113749590_113757698_113757756_113758658_113758849_113759022
H1_mix_00003875	chr1	-	4551	19	NNC	ENSG00000116793.16	novel	3657	19	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	71.9927122511991	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCAGTTTCTAGGTTTT	22	True	NA	-6	True	AATAAA	-16	NA	113759486	113697207	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_113697726_113698261_113698388_113698991_113700244_113700793_113700950_113704080_113704168_113704665_113704798_113705889_113706163_113706593_113706723_113710253_113710476_113711745_113711836_113711939_113712114_113713278_113713439_113724758_113724894_113726417_113726575_113738109_113738269_113738729_113738800_113757698_113757756_113758658_113758849_113759022
H1_mix_00003878	chr1	-	2217	13	ISM	ENSG00000116793.16	ENST00000369604.6	3657	19	73	8934	24	0	5prime_fragment	FALSE	canonical	3	131	junction_12	55.4328923614451	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGATATTTGTGGATTT	95	False	NA	-8	True	AATAAA	-16	NA	113759413	113705764	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_113706163_113706593_113706723_113710253_113710476_113711745_113711836_113711939_113712114_113713278_113713439_113724758_113724894_113726417_113726575_113738109_113738269_113738729_113738800_113757698_113757756_113758658_113758734_113759022
H1_mix_00003879	chr1	-	2559	12	ISM	ENSG00000116793.16	ENST00000357783.6	2747	15	10	1942	10	0	intron_retention	FALSE	canonical	3	142	junction_7	52.9776188514882	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGATATTTGTGGATTT	42	True	NA	-8	True	AATAAA	-16	NA	113759466	113705764	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_113706163_113706593_113706723_113710253_113710476_113711745_113711836_113711939_113712114_113713278_113713439_113724758_113724894_113726417_113726575_113738109_113738269_113738729_113738800_113757698_113757756_113758658
H1_mix_00003880	chr1	-	6455	7	FSM	ENSG00000081019.14	ENST00000612242.4	6592	7	138	-1	-17	0	multi-exon	FALSE	canonical	3	54	junction_5	11.2842072532072	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTGTTTCATCACAAAAT	238	False	NA	-15	True	AATAAA	-22	NA	113812310	113761831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_113766454_113767098_113767208_113768221_113768390_113777209_113777353_113777670_113777809_113797362_113798037_113811709
H1_mix_00003882	chr1	-	2144	7	FSM	ENSG00000134262.13	ENST00000369567.5	2144	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	31.6355109893227	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATAGGGGTCATCATTTG	21	True	NA	NA	False	ATTAAA	-20	NA	113904828	113894747	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_113895493_113895756_113896039_113896257_113896466_113897839_113897944_113898717_113898802_113899903_113900401_113904604
H1_mix_00003883	chr1	-	2742	11	FSM	ENSG00000134262.13	ENST00000256658.8	2742	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_10	24.2794151494635	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATAGGGGTCATCATTTG	-4	True	NA	NA	False	ATTAAA	-20	NA	113905070	113894747	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_113895493_113895756_113896039_113896257_113896466_113897839_113897944_113898717_113898802_113899903_113900401_113901235_113901384_113901754_113901886_113902637_113902863_113904604_113904794_113904941
H1_mix_00003886	chr1	-	587	5	Antisense	novelGene_ENSG00000116774.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	34	junction_4	27.3313007374329	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTGTTTGTAATTAATC	NA	False	NA	-16	True	ATTAAA	-24	NA	114032274	114014903	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr1_-_114015170_114021928_114022043_114022679_114022781_114026725_114026776_114032218
H1_mix_00003887	chr1	-	4321	7	FSM	ENSG00000134207.17	ENST00000610121.5	4320	7	0	-1	0	1	multi-exon	FALSE	canonical	2	3	junction_1	140.965322764935	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTGTCATTTTATGTTC	0	True	NA	-1	True	ATTAAA	-20	NA	114153868	114089289	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_114092083_114097726_114097878_114099093_114099266_114103600_114103722_114137494_114138054_114139614_114139881_114153609
H1_mix_00003888	chr1	-	4279	8	NIC	ENSG00000134207.17	novel	4424	8	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	279	junction_7	35.3351302328353	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTTGTCATTTTATGT	8	True	NA	-3	True	ATTAAA	-18	NA	114152915	114089291	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_114092083_114093734_114093804_114097726_114097878_114099093_114099266_114103600_114103722_114137494_114138054_114139614_114139881_114152765
H1_mix_00003890	chr1	-	1897	8	FSM	ENSG00000134207.17	ENST00000610096.1	1897	8	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_7	86.9332373439644	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGGGAAAAAAAAAAAG	18	False	NA	15	True	NA	NA	NA	114153850	114091764	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_114092083_114093734_114093804_114097726_114097878_114099093_114099266_114103600_114103722_114137494_114138054_114139614_114139881_114153609
H1_mix_00003894	chr1	-	8382	20	FSM	ENSG00000197323.12	ENST00000358465.7	8369	20	0	-13	0	13	multi-exon	FALSE	canonical	3	147	junction_12	27.2054866553628	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTTCTTCTTCTG	-7	True	NA	-18	True	ATTAAA	-30	NA	114511203	114392776	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_114397861_114397939_114397991_114399456_114399610_114401388_114401464_114402759_114402884_114405409_114405760_114406940_114407101_114408676_114408741_114410183_114410317_114421435_114421637_114424590_114424756_114425448_114425724_114427176_114427295_114427747_114427895_114430797_114430913_114433616_114433734_114463103_114463237_114463411_114463557_114464269_114464389_114510550
H1_mix_00003896	chr1	-	3457	19	FSM	ENSG00000197323.12	ENST00000369543.6	3457	19	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	38.1997673058649	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CGAAAAAAAAAAAAAAAACA	36	False	NA	NA	False	AGTAAA	-40	NA	114511160	114397607	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_114397861_114399456_114399610_114401388_114401464_114402759_114402884_114405409_114405760_114406940_114407101_114408676_114408741_114410183_114410317_114421435_114421637_114424590_114424756_114425448_114425724_114427176_114427295_114427747_114427895_114430797_114430913_114433616_114433734_114463103_114463237_114463411_114463557_114464269_114464389_114510550
H1_mix_00003899	chr1	-	891	6	FSM	ENSG00000116752.6	ENST00000485021.1	891	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	277.031406161828	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATAATATTGTGTCATAG	13	False	114581642	47	True	CATAAA	-37	NA	114581629	114567883	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_114568257_114569991_114570073_114570699_114570751_114575589_114575752_114581298_114581392_114581498
H1_mix_00003900	chr1	-	5804	19	NIC	ENSG00000175984.15	novel	6177	21	NA	NA	0	-3	intron_retention	FALSE	canonical	3	16	junction_9	5.1267875533597	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGATCCCTTGGAGAATT	-10	True	NA	-16	True	AATAAA	-14	NA	114670049	114582853	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_114585632_114587386_114587474_114587715_114587953_114594472_114594579_114595831_114595874_114599273_114599452_114600203_114600353_114600819_114600961_114601507_114601586_114602124_114602195_114604921_114605032_114608685_114608874_114611072_114611118_114618385_114618483_114621894_114622066_114622986_114623100_114623506_114623644_114625178_114626189_114669982
H1_mix_00003902	chr1	-	4288	19	ISM	ENSG00000009307.17	ENST00000686123.1	4128	20	878	-2	812	-1	3prime_fragment	FALSE	canonical	0	0	junction_18	873.399552196919	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACCTAGCGCTTTCATTA	1499	False	NA	-4	True	AATAAA	-24	NA	114757121	114716916	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737962_114738073_114739691_114739891_114749820_114750208_114756776
H1_mix_00003903	chr1	-	4003	19	FSM	ENSG00000009307.17	ENST00000339438.10	4006	19	0	3	0	0	multi-exon	FALSE	canonical	1	998	junction_7	557.356348098263	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTAGCGCTTTCATTAT	2	True	NA	-3	True	AATAAA	-25	NA	114757983	114716915	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737962_114738073_114739691_114739891_114749820_114750208_114757924
H1_mix_00003904	chr1	-	4097	20	FSM	ENSG00000009307.17	ENST00000358528.9	4097	20	0	0	0	0	multi-exon	FALSE	canonical	1	513	junction_15	917.208860719752	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTAGCGCTTTCATTAT	1	True	NA	-3	True	AATAAA	-25	NA	114757984	114716915	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737470_114737564_114737962_114738073_114739691_114739891_114749820_114750208_114757924
H1_mix_00003905	chr1	-	4309	21	FSM	ENSG00000009307.17	ENST00000610726.5	4274	21	-36	1	-23	-1	multi-exon	FALSE	canonical	1	11	junction_19	1203.57951129122	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACCTAGCGCTTTCATTA	570	False	NA	-4	True	AATAAA	-24	NA	114758050	114716916	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737470_114737564_114737962_114738073_114739691_114739891_114741526_114741674_114749820_114750208_114757924
H1_mix_00003906	chr1	-	4016	19	NNC	ENSG00000009307.17	novel	4006	19	NA	NA	0	1	intron_retention	FALSE	canonical	1	147	junction_1	833.07657525999	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGACACTAGCACCTAGC	3	True	NA	-14	True	AATAAA	-14	NA	114757982	114716926	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_114718242_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737962_114738073_114739691_114739891_114749820_114750208_114757924
H1_mix_00003907	chr1	-	3228	18	FSM	ENSG00000009307.17	ENST00000261443.9	3228	18	0	0	0	0	multi-exon	FALSE	canonical	1	104	junction_17	878.392165178943	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAATCTTGTTTTTTTT	11	True	NA	-23	True	AATAAA	-14	NA	114757974	114717294	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737962_114738073_114739691_114739891_114757924
H1_mix_00003909	chr1	-	3469	18	FSM	ENSG00000009307.17	ENST00000530886.5	3459	18	0	-10	0	0	multi-exon	FALSE	canonical	1	108	junction_16	880.542475922152	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAATCTTGTTTTTTTT	593	False	NA	-23	True	AATAAA	-14	NA	114758027	114717294	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737962_114738073_114749820_114750208_114757924
H1_mix_00003911	chr1	-	2667	19	FSM	ENSG00000009307.17	ENST00000534699.5	2667	19	0	0	0	0	multi-exon	FALSE	canonical	1	104	junction_18	1107.431189513	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAACTTAAGGTGGCGCC	3	True	NA	6	True	AATAAA	-45	NA	114757982	114717956	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737470_114737564_114737962_114738073_114739691_114739891_114757924
H1_mix_00003917	chr1	-	476	3	FSM	ENSG00000052723.12	ENST00000475335.5	470	3	0	-6	0	-3	multi-exon	FALSE	canonical	3	340	junction_1	7.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAGATTGTTTTAGATT	29	True	NA	-7	True	AATAAA	-23	NA	114780634	114779100	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_114779285_114780109_114780216_114780448
H1_mix_00003918	chr1	-	421	2	FSM	ENSG00000052723.12	ENST00000466657.1	415	2	0	-6	0	-3	multi-exon	FALSE	canonical	3	48	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAGATTGTTTTAGATT	-22	True	NA	-7	True	AATAAA	-23	NA	114780685	114779100	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_114779285_114780448
H1_mix_00003925	chr1	-	1143	4	FSM	ENSG00000116815.16	ENST00000369487.3	892	4	-10	-241	-10	241	multi-exon	FALSE	canonical	3	66	junction_1	8.2192186706253	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATATAACACGAATGGGGC	-32	True	NA	NA	False	NA	NA	NA	116571049	116521545	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_116521984_116535964_116536229_116544310_116544605_116570902
H1_mix_00003928	chr1	-	7251	11	FSM	ENSG00000143061.18	ENST00000369486.8	7235	11	0	-16	0	7	multi-exon	FALSE	canonical	3	65	junction_6	12.3142194230897	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTCTTCTATCCTTCT	-22	True	NA	1	True	AGTAAA	-31	NA	116667733	116574391	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_116577563_116579391_116579878_116584644_116585053_116588693_116589105_116599940_116600346_116603623_116604026_116607941_116608332_116613764_116614176_116616079_116616458_116666283_116666957_116667617
H1_mix_00003929	chr1	-	7333	12	FSM	ENSG00000143061.18	ENST00000369483.5	7326	12	0	-7	0	7	multi-exon	FALSE	canonical	3	11	junction_7	32.653199000384	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTCTTCTATCCTTCT	48	False	NA	1	True	AGTAAA	-31	NA	116667755	116574391	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_116577563_116579391_116579878_116584644_116585053_116588693_116589105_116599940_116600346_116603623_116604026_116606491_116606552_116607941_116608332_116613764_116614176_116616079_116616458_116666283_116666957_116667617
H1_mix_00003932	chr1	-	3536	6	FSM	ENSG00000134253.10	ENST00000256649.9	3536	6	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_4	17.5202739704606	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTGAAATCTGCATTGTA	-23	True	NA	-19	True	AATAAA	-22	NA	117121749	117111059	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_117112454_117113358_117113486_117115574_117115690_117116615_117116746_117118033_117118768_117120713
H1_mix_00003933	chr1	-	3525	6	FSM	ENSG00000134253.10	ENST00000369464.7	3495	6	-30	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	44.1062353868475	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTGAAATCTGCATTGTA	NA	False	NA	-19	True	AATAAA	-22	NA	117121792	117111059	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_117112454_117113358_117113486_117115574_117115690_117116615_117116746_117118087_117118768_117120713
H1_mix_00003935	chr1	-	437	1	FSM	ENSG00000228217.1	ENST00000423940.1	420	1	0	-17	0	17	mono-exon	FALSE	NA	NA	NA	NA	NA	229	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTAGTTATGTTCACAGA	NA	False	NA	NA	False	TATAAA	-17	NA	117778506	117778069	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_117778100_117778500
H1_mix_00003937	chr1	-	8819	14	FSM	ENSG00000196505.11	ENST00000369443.10	8819	14	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	12.4933118201975	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGCTCAACTTAGCATTA	-5	True	NA	-8	True	AGTAAA	-16	NA	117929621	117863484	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_117870617_117878008_117878153_117881822_117881878_117883487_117883628_117886576_117886654_117887697_117887775_117896832_117896990_117899056_117899217_117906505_117906583_117911993_117912083_117912529_117912684_117918596_117918737_117920181_117920425_117929447
H1_mix_00003938	chr1	-	10560	15	NIC	ENSG00000196505.11	novel	8819	14	NA	NA	0	1713	combination_of_known_junctions	TRUE	canonical	3	11	junction_1	22.0500358646568	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAGCAGCAGAGGTTAGC	-13	True	NA	NA	False	NA	NA	NA	117929583	117861771	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_117870617_117877775_117877842_117878008_117878153_117881822_117881878_117883487_117883628_117886576_117886654_117887697_117887775_117896832_117896990_117899056_117899217_117906505_117906583_117911993_117912083_117912529_117912684_117918596_117918737_117920181_117920425_117929447
H1_mix_00003939	chr1	-	2436	13	FSM	ENSG00000196505.11	ENST00000369442.3	2436	13	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	10.2537256101814	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCTCTAACATTTCTCT	-13	True	NA	2	True	AATAAA	-16	NA	117929583	117877221	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_117878153_117881822_117881878_117883487_117883628_117886576_117886654_117887697_117887775_117896832_117896990_117899056_117899217_117906505_117906583_117911993_117912083_117912529_117912684_117918596_117918737_117920181_117920425_117929447
H1_mix_00003940	chr1	-	347	3	FSM	ENSG00000155761.14	ENST00000463628.1	501	3	154	0	154	0	multi-exon	FALSE	canonical	1	3	junction_1	0	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAACACTAAACGTCTAG	NA	False	NA	NA	False	NA	NA	NA	118087008	118085977	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_118086073_118086670_118086785_118086870
H1_mix_00003941	chr1	-	381	3	FSM	ENSG00000155761.14	ENST00000465053.1	527	3	0	146	0	-146	multi-exon	FALSE	canonical	1	1	junction_2	1	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGAAAGTGTTTATAG	20	False	118185243	NA	False	AAAAAG	-43	NA	118185223	118150542	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_118150630_118151228_118151370_118185070
H1_mix_00003942	chr1	-	2802	6	FSM	ENSG00000116874.12	ENST00000235521.5	2787	6	0	-15	0	15	multi-exon	FALSE	canonical	3	56	junction_1	15.72768260107	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGGTTTTTACCCCC	-2	True	NA	14	True	ACTAAA	-35	NA	119140653	119031200	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_119033360_119034094_119034214_119042263_119042350_119045581_119045663_119076349_119076608_119140554
H1_mix_00003947	chr1	-	1433	2	FSM	ENSG00000223804.5	ENST00000617318.4	625	2	-808	0	-776	0	multi-exon	FALSE	canonical	3	87	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCCAGGCGTGATGGTAT	353	False	NA	NA	False	AATAAA	-31	NA	120342647	120267336	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_120267839_120341716
H1_mix_00003948	chr1	-	715	3	FSM	ENSG00000223804.5	ENST00000616141.4	715	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGCGTGATGGTATGTT	1129	False	NA	NA	False	AATAAA	-34	NA	120341871	120267333	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_120267839_120340755_120340811_120341716
H1_mix_00003952	chr1	-	2399	4	FSM	ENSG00000188610.12	ENST00000369390.7	2396	4	0	-3	0	3	multi-exon	FALSE	canonical	3	171	junction_1	31.8468557666565	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGGCTAATGTTTATTG	NA	False	NA	NA	False	AATAAA	-20	NA	121184340	121167642	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_121168836_121177207_121177333_121181270_121181349_121183337
H1_mix_00003953	chr1	-	2299	4	FSM	ENSG00000188610.12	ENST00000355228.8	1773	4	-526	0	-97	0	multi-exon	FALSE	canonical	3	10	junction_3	86.259299015623	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCTTCCTTTAATTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	121184437	121167719	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_121168836_121177207_121177333_121181270_121181349_121183457
H1_mix_00003955	chr1	-	2395	4	FSM	ENSG00000263513.6	ENST00000584486.6	2395	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	51.227162933567	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGGCTAATGTTTATTG	0	True	NA	NA	False	AATAAA	-20	NA	143971986	143955286	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_143956482_143964854_143964980_143968923_143969002_143970989
H1_mix_00003956	chr1	-	254	3	FSM	ENSG00000232527.8	ENST00000294715.6	268	3	14	0	14	0	multi-exon	FALSE	canonical	2	6	junction_1	9.5	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAGCCTAAATGTGGTTG	NA	False	NA	NA	False	NA	NA	NA	144250265	144245237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_144245316_144245685_144245821_144250224
H1_mix_00003959	chr1	-	4314	20	NNC	ENSG00000266338.7	novel	4862	22	NA	NA	3	34	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_4	19.2910353356509	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTTTTTTACATTCAGT	22	False	NA	NA	False	ATTAAA	-29	NA	144461644	144421481	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_144423257_144423869_144423976_144424689_144424863_144425516_144425569_144426277_144426371_144427910_144427991_144428605_144428658_144429699_144429864_144433772_144433825_144435110_144435317_144435780_144435854_144436894_144437110_144437944_144438048_144439828_144440039_144440140_144440296_144448774_144448917_144450771_144450803_144456536_144456806_144459365_144459465_144461380
H1_mix_00003961	chr1	-	282	1	Intergenic	novelGene_100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGTATTTGTGCATTTA	NA	False	NA	NA	False	ATTAAA	-15	NA	144647126	144646844	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_-_144646800_144647100
H1_mix_00003963	chr1	-	7374	10	FSM	ENSG00000196369.12	ENST00000612199.4	7120	10	-107	-147	-107	147	multi-exon	FALSE	canonical	3	61	junction_7	70.4821140081775	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAGAGCATAGTAATGGAA	NA	False	NA	NA	False	AATAAA	-44	NA	145095635	144887117	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_144892382_144893407_144893510_144897115_144897338_144905090_144905220_144905858_144906075_144914691_144914755_144955438_144955602_144995007_144995201_145092834_145093444_145095222
H1_mix_00003964	chr1	-	7377	10	FSM	ENSG00000196369.12	ENST00000641863.2	6901	10	-306	-170	-107	147	multi-exon	FALSE	canonical	3	61	junction_7	67.6309885872146	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAGAGCATAGTAATGGAA	NA	False	NA	NA	False	AATAAA	-44	NA	145095635	144887117	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_144892382_144893407_144893510_144897115_144897341_144905090_144905220_144905858_144906075_144914691_144914755_144955438_144955602_144995007_144995201_145092834_145093444_145095222
H1_mix_00003965	chr1	-	6524	8	NIC	ENSG00000196369.12	novel	6901	10	NA	NA	2	-19	combination_of_known_splicesites	FALSE	canonical	2	19	junction_6	79.5320497584182	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAATATTTGTGAAAGAAT	NA	False	NA	-22	True	CATAAA	-9	NA	145095327	144887306	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_144892382_144893407_144893510_144897115_144897341_144905090_144905220_144905858_144906075_144914691_144914755_145092834_145093444_145095222
H1_mix_00003966	chr1	-	3419	11	FSM	ENSG00000196369.12	ENST00000619678.2	4971	11	10	1542	8	-1542	multi-exon	FALSE	canonical	3	13	junction_8	82.6125898395638	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATGGCATTTTAGCTCA	NA	False	NA	NA	False	ATTAAA	-19	NA	145095321	144890822	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_144892382_144893407_144893510_144897115_144897341_144905090_144905220_144905858_144906075_144914691_144914755_144955438_144955602_144960337_144960399_144995007_144995201_145092834_145093444_145095222
H1_mix_00003967	chr1	-	3394	1	FSM	ENSG00000272419.6	ENST00000621033.1	3389	1	0	-5	0	4	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGATTTTTCAGTTGA	NA	False	NA	NA	False	AATAAA	-23	NA	145167488	145164094	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_145164100_145167500
H1_mix_00003968	chr1	-	1019	3	FSM	ENSG00000272419.6	ENST00000621798.4	1015	3	0	-4	0	4	multi-exon	FALSE	canonical	0	0	junction_1	10.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGATTTTTCAGTTGA	879	False	NA	NA	False	AATAAA	-23	NA	145216058	145164094	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_145164639_145214676_145214732_145215638
H1_mix_00003970	chr1	-	5769	3	NNC	ENSG00000162825.17	novel	18760	138	NA	NA	-14725	-115580	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTTGAACCTTGTTTTTG	6016	False	NA	NA	False	NA	NA	NA	145420292	145405479	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_145405565_145412748_145412891_145414750
H1_mix_00003974	chr1	-	1879	10	NIC	ENSG00000174827.14	novel	2065	9	NA	NA	-99	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	32.902024403926	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGTATGCTTGATAGT	743	False	NA	NA	False	AATAAA	-18	NA	145707499	145670984	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_145671125_145671216_145671265_145672729_145673021_145673656_145673882_145678448_145678646_145680911_145681108_145682499_145682637_145686476_145686727_145687811_145688024_145707316
H1_mix_00003975	chr1	-	1968	9	NIC	ENSG00000174827.14	novel	2065	9	NA	NA	-98	0	intron_retention	FALSE	canonical	3	16	junction_1	30.7283968830136	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTGAGTATGCTTGATA	744	False	NA	NA	False	AATAAA	-16	NA	145707498	145670986	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_145671265_145672729_145673021_145673656_145673882_145678448_145678646_145680911_145681108_145682499_145682637_145686476_145686727_145687811_145688024_145707316
H1_mix_00003976	chr1	-	5275	3	ISM	ENSG00000174827.14	ENST00000344770.6	2084	9	13863	-196	-4183	63	3prime_fragment	FALSE	canonical	3	123	junction_1	6.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAAGTTATTCACGGTTT	NA	False	NA	NA	False	NA	NA	NA	145677939	145670788	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_145671490_145672729_145673021_145673656
H1_mix_00003980	chr1	-	2031	14	NIC	ENSG00000131788.16	novel	2902	14	NA	NA	3	-868	intron_retention	FALSE	canonical	3	285	junction_7	23.6167626759033	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCCAACCCCAGCTACTC	19	True	NA	NA	False	NA	NA	NA	145859776	145849389	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_145849713_145850231_145850270_145850452_145850587_145850770_145850940_145851019_145851154_145853503_145853665_145853812_145853887_145854457_145854564_145854745_145854881_145855735_145855827_145856067_145856119_145856346_145856432_145856588_145857007_145859664
H1_mix_00003985	chr1	-	1620	4	FSM	ENSG00000131779.11	ENST00000369306.8	1620	4	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	4.32049379893857	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGGTCTGGTCCCTCAT	-10	True	NA	-2	True	ATTAAA	-19	NA	145918717	145911349	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_145912567_145916816_145917019_145917700_145917817_145918632
H1_mix_00003986	chr1	-	4967	6	FSM	ENSG00000265241.8	ENST00000583313.7	4909	6	24	-82	0	82	multi-exon	FALSE	canonical	3	2671	junction_4	115.425473791534	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTCTTCCCCTCTCAGT	8835	False	NA	0	True	AATAAA	-27	NA	145927460	145921473	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_145925928_145926040_145926178_145926481_145926619_145926808_145926887_145927017_145927078_145927359
H1_mix_00003987	chr1	-	4964	6	FSM	ENSG00000265241.8	ENST00000369307.4	796	6	0	-4168	0	82	multi-exon	FALSE	canonical	3	424	junction_4	972.490699184316	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTCTTCCCCTCTCAGT	8835	False	NA	0	True	AATAAA	-27	NA	145927460	145921473	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_145925928_145926040_145926178_145926481_145926619_145926808_145926884_145927017_145927078_145927359
H1_mix_00003989	chr1	-	3991	6	FSM	ENSG00000271601.4	ENST00000604000.4	3991	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	8.43800924389159	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGACTGACTCTTTCTTG	6559	False	145958033	-3	True	ATTAAA	-21	NA	145958017	145933422	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_145936553_145936907_145936986_145937603_145937700_145942712_145942854_145947618_145947783_145957635
H1_mix_00003990	chr1	-	2906	8	FSM	ENSG00000265972.6	ENST00000582401.6	2905	8	0	-1	0	1	multi-exon	TRUE	canonical	3	32	junction_5	3.97953950776689	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTGAGATGGCTTTGGA	-3	True	NA	NA	False	AATAAA	-24	NA	145996579	145992433	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_145993887_145994015_145994168_145994280_145994438_145994543_145994801_145994928_145995032_145995143_145995292_145995403_145995477_145996016
H1_mix_00003993	chr1	-	3032	11	ISM	ENSG00000271425.9	ENST00000583866.9	13030	90	70361	58	70361	-58	3prime_fragment	FALSE	canonical	0	0	junction_3	8.17863069223694	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAATATTTGATTATGGT	NA	False	NA	NA	False	NA	NA	NA	146074443	146064768	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_146066562_146067179_146067289_146068002_146068176_146068771_146068824_146069542_146069716_146070323_146070433_146071146_146071320_146071967_146072020_146072728_146072902_146073499_146073552_146074270
H1_mix_00003994	chr1	-	1874	5	FSM	ENSG00000264343.7	ENST00000362074.7	1874	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	11.5190060335083	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACTGGTAATTTATTCAT	NA	False	NA	NA	False	ATTAAA	-28	NA	146229026	146155351	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_146156230_146156479_146156816_146164750_146165011_146189299_146189382_146228708
H1_mix_00003995	chr1	-	1310	1	Genic_Genomic	ENSG00000277406.2	novel	NA	NA	NA	NA	6306	618	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAATGGGGTAAATTT	NA	False	NA	NA	False	NA	NA	NA	146321905	146320595	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_-_146320600_146321900
H1_mix_00003997	chr1	-	5427	8	FSM	ENSG00000131791.8	ENST00000254101.4	5343	8	-80	-4	0	4	multi-exon	FALSE	canonical	3	77	junction_7	46.7926385279583	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTATTGATTGATGACT	20	True	NA	-10	True	AATAAA	-23	NA	147172550	147155101	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_147159643_147161711_147161781_147162439_147162574_147166497_147166619_147166845_147166940_147167766_147167934_147171988_147172168_147172428
H1_mix_00003998	chr1	-	5253	7	NIC	ENSG00000131791.8	novel	5343	8	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_5	72.4791157660069	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGAGTTATTGATTGAT	23	True	NA	-14	True	AATAAA	-19	NA	147172547	147155105	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_147159643_147161711_147161781_147162439_147162574_147166497_147166619_147166845_147166940_147171988_147172168_147172428
H1_mix_00003999	chr1	-	5780	7	ISM	ENSG00000131791.8	ENST00000254101.4	5343	8	-176	0	-96	0	intron_retention	FALSE	canonical	3	178	junction_5	18.2817456010695	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGAGTTATTGATTGAT	NA	False	NA	-14	True	AATAAA	-19	NA	147172646	147155105	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_147159643_147161711_147161781_147162439_147162574_147166497_147166619_147166845_147166940_147167766_147167934_147171988
H1_mix_00004000	chr1	-	601	4	FSM	ENSG00000131791.8	ENST00000496858.1	601	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	82.3421047959197	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAAACTCTTAGGATCCT	9972	False	NA	NA	False	AATGAA	-5	NA	147162510	147159218	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_147159643_147160796_147160834_147161711_147161781_147162439
H1_mix_00004001	chr1	-	578	5	FSM	ENSG00000131791.8	ENST00000474939.1	578	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	74.6738742800988	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTCAAATCCCCACCCAT	20	True	NA	NA	False	AAGAAA	-24	NA	147172550	147162511	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_147162574_147166497_147166619_147166845_147166940_147171988_147172168_147172428
H1_mix_00004002	chr1	-	1816	1	FSM	ENSG00000226015.2	ENST00000413611.2	1657	1	-40	-119	-40	119	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATGTTATAATAAACATAT	NA	False	NA	-43	True	NA	NA	NA	147204972	147203156	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_147203200_147205000
H1_mix_00004003	chr1	-	1744	5	FSM	ENSG00000131781.13	ENST00000619062.1	1842	5	81	17	81	-17	multi-exon	FALSE	canonical	3	25	junction_1	3.49106001094224	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAGAAA	70	False	NA	NA	False	AAAAAG	-3	NA	147225547	147208455	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_147209052_147212392_147212536_147213307_147213471_147215753_147215943_147224894
H1_mix_00004004	chr1	-	6911	10	FSM	ENSG00000162836.12	ENST00000583509.7	6956	10	13	32	13	-32	multi-exon	FALSE	canonical	3	63	junction_3	11.8769410369447	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAATAAATGAGTTCAGA	9754	False	NA	NA	False	NA	NA	NA	147670511	147642261	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_147647567_147648245_147648412_147650142_147650239_147652448_147652550_147654193_147654327_147655160_147655249_147658959_147659040_147659395_147659527_147659646_147659776_147669829
H1_mix_00004008	chr1	-	4631	21	FSM	ENSG00000263956.8	ENST00000614015.4	4630	21	0	-1	0	1	multi-exon	TRUE	canonical	2	16	junction_7	13.4025184200582	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATTTTCTAATCTCTT	NA	False	NA	99	True	AATAAA	-16	NA	148127288	148102045	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_148103913_148104536_148104646_148105359_148105529_148106180_148106233_148106941_148107115_148107710_148107763_148108481_148108655_148109283_148109336_148110377_148110542_148114436_148114489_148115792_148115999_148116462_148116536_148117571_148117787_148118619_148118723_148120500_148120711_148122054_148122267_148122728_148122802_148123852_148124068_148124898_148125002_148126828_148127039_148127140
H1_mix_00004010	chr1	-	5494	24	FSM	ENSG00000263956.8	ENST00000615281.4	5494	24	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_22	16.5577410950326	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGACTTTTGGATTGTT	NA	False	NA	-6	True	ATTAAA	-16	NA	148152322	148102150	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_148103913_148104536_148104646_148105359_148105529_148106180_148106233_148106941_148107115_148107710_148107763_148108481_148108655_148109283_148109336_148110377_148110542_148114436_148114489_148115792_148115999_148116462_148116536_148117571_148117787_148118619_148118723_148120500_148120711_148122054_148122267_148122728_148122802_148123852_148124068_148124898_148125002_148126828_148127039_148135671_148135814_148137710_148137810_148143414_148143687_148151719
H1_mix_00004014	chr1	-	1050	3	FSM	ENSG00000274020.4	ENST00000613452.1	1050	3	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_1	12	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCGGCTTATCCTTGAAT	1146	False	NA	-3	True	AATAAA	-16	NA	148459757	148432958	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_148433644_148435145_148435355_148459601
H1_mix_00004018	chr1	-	717	1	FSM	ENSG00000236334.3	ENST00000419275.3	755	1	38	0	38	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAACAACAACAAAAAAGCTC	NA	False	NA	NA	False	AATAAA	-14	NA	148483264	148482547	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_148482500_148483300
H1_mix_00004024	chr1	-	5606	27	NNC	ENSG00000269713.8	novel	6062	30	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	17.9447294103162	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGACTTTTGGATTGTT	23	False	NA	NA	False	ATTAAA	-16	NA	149103527	149054137	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_149055900_149056511_149056621_149060522_149060696_149061331_149061384_149062092_149062266_149062861_149062914_149063632_149063806_149064430_149064483_149065525_149065690_149069593_149069646_149070933_149071140_149071603_149071677_149072717_149072933_149073767_149073871_149075654_149075865_149077207_149077420_149077882_149077956_149079006_149079222_149080052_149080156_149081964_149082175_149082271_149082431_149090752_149090895_149098437_149098707_149100740_149100931_149101261_149101380_149102728_149102848_149103300
H1_mix_00004025	chr1	-	2930	21	FSM	ENSG00000269713.8	ENST00000610300.4	2930	21	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	18.4474930546131	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCCTGCAGGCAGGACCT	115	False	NA	NA	False	NA	NA	NA	149082311	149055629	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_149055900_149056511_149056621_149057334_149057508_149058163_149058216_149062092_149062266_149062861_149062914_149063632_149063806_149064430_149064483_149065525_149065690_149069593_149069646_149070933_149071140_149071603_149071677_149072717_149072933_149073767_149073871_149075654_149075865_149077207_149077420_149077882_149077956_149079006_149079222_149080052_149080156_149081964_149082175_149082271
H1_mix_00004027	chr1	-	1709	1	FSM	ENSG00000203811.2	ENST00000369158.2	522	1	-38	-1149	-38	1149	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATTTTGCCTTTCCTGAG	9057	False	NA	NA	False	AATAAA	-19	NA	149841246	149839537	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_149839500_149841200
H1_mix_00004028	chr1	-	562	1	FSM	ENSG00000288825.1	ENST00000369159.3	533	1	14	-43	14	43	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCGTTCCTCAGTAGTGAA	7567	False	NA	NA	False	AATAAA	-30	NA	149842736	149842174	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_149842200_149842700
H1_mix_00004029	chr1	-	6440	1	FSM	ENSG00000261716.2	ENST00000564237.2	6440	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATGAAACTTTTGTATA	NA	False	NA	NA	False	AATAAA	-30	NA	149850937	149844497	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_149844500_149850900
H1_mix_00004030	chr1	-	1694	2	FSM	ENSG00000270276.3	ENST00000612061.1	1694	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACTGAGATACATAGTAAA	8	False	NA	NA	False	AATAAA	-20	NA	149861148	149859184	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_149859682_149859951
H1_mix_00004035	chr1	-	1544	6	FSM	ENSG00000143368.10	ENST00000271628.9	1544	6	0	0	0	0	multi-exon	FALSE	canonical	3	1408	junction_3	156.466737679291	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGTGTTTTCCTTGAC	-18	True	NA	-23	True	AATAAA	-18	NA	149927803	149923316	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_149923730_149923840_149924015_149925835_149926043_149926375_149926919_149927165_149927295_149927725
H1_mix_00004037	chr1	-	8922	12	FSM	ENSG00000264522.6	ENST00000581312.6	8922	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	7.39890543613666	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTATTTTATTTTCTGT	3	True	NA	-11	True	AATAAA	-22	NA	150010726	149937811	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_149945066_149947250_149947336_149948968_149949084_149949628_149949779_149950093_149950222_149959683_149959797_149964221_149964350_149965776_149965879_149967293_149967522_149971062_149971252_149977425_149977577_150010447
H1_mix_00004038	chr1	-	3407	7	FSM	ENSG00000143401.15	ENST00000583931.6	3407	7	0	0	0	0	multi-exon	TRUE	canonical	3	1129	junction_5	58.5775838809807	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCAGTGTATAGCATTCA	-1	True	NA	-3	True	AATAAA	-24	NA	150236112	150218416	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_150220762_150223185_150223241_150226607_150226796_150229071_150229238_150230570_150230694_150231776_150231927_150235732
H1_mix_00004040	chr1	-	621	3	FSM	ENSG00000143401.15	ENST00000532744.2	621	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	608.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATCGTTCTTAATACTCA	91	False	NA	NA	False	AATGAA	-32	NA	150236064	150229071	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_150229238_150230570_150230694_150235732
H1_mix_00004041	chr1	-	1735	7	FSM	ENSG00000117362.13	ENST00000369109.8	1730	7	0	-5	0	0	multi-exon	FALSE	canonical	3	219	junction_1	88.706757853553	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGAACTTGGCTTTTAAGG	-29	True	NA	-16	True	AATAAA	-19	NA	150269016	150265398	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_150266195_150266532_150266657_150267074_150267203_150267355_150267479_150267715_150267790_150267956_150268128_150268697
H1_mix_00004043	chr1	-	2517	9	Fusion	ENSG00000117362.13_ENSG00000289041.1	novel	1730	7	NA	NA	-131	0	multi-exon	FALSE	canonical	2	4	junction_7	190.600982093482	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGGGGAACTTGGCTTT	NA	False	NA	-21	True	AATAAA	-14	NA	150282302	150265403	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_-_150266195_150266532_150266657_150267074_150267203_150267355_150267479_150267715_150267790_150267956_150268128_150268697_150269330_150279823_150280006_150282010
H1_mix_00004045	chr1	-	4673	2	FSM	ENSG00000143384.14	ENST00000464132.2	4550	2	-273	150	-12	-150	multi-exon	FALSE	canonical	3	659	junction_1	0	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCCAAGTAAAATCAAAAACC	95	False	NA	NA	False	ATTAAA	-36	NA	150579750	150574325	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_150577492_150578243
H1_mix_00004046	chr1	-	3950	3	FSM	ENSG00000143384.14	ENST00000369026.3	3950	3	0	0	0	0	multi-exon	FALSE	canonical	3	616	junction_2	21.5	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGGGTGTGATATGGGTC	-7	True	NA	31	True	AATAAA	-14	NA	150579610	150574557	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_150577492_150578243_150578492_150578842
H1_mix_00004048	chr1	-	1227	4	FSM	ENSG00000143420.19	ENST00000369014.10	1227	4	0	0	0	0	multi-exon	FALSE	canonical	3	948	junction_1	176.922456334846	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTGAAGCAGTTGGTGT	-18	True	NA	-12	True	AATAAA	-37	NA	150629612	150622124	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_150622860_150625641_150625809_150627466_150627593_150629413
H1_mix_00004049	chr1	-	792	4	FSM	ENSG00000143420.19	ENST00000361532.9	792	4	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_3	440.182537893845	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAAAGGGGTTCTAGTT	-7	True	NA	NA	False	NA	NA	NA	150629140	150622440	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_150622860_150625641_150625809_150627466_150627593_150629060
H1_mix_00004051	chr1	-	2818	3	FSM	ENSG00000143420.19	ENST00000271690.12	2818	3	0	0	0	0	multi-exon	FALSE	canonical	3	1297	junction_1	24	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGTGTGTGGTCTGGTTC	17	True	NA	-3	True	ATTAAA	-28	NA	150629577	150623280	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_150625809_150627466_150627593_150629413
H1_mix_00004052	chr1	-	2887	3	FSM	ENSG00000143420.19	ENST00000356527.9	2546	3	0	-341	0	0	multi-exon	FALSE	canonical	2	5	junction_1	670	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGTGTGTGGTCTGGTTC	17	True	NA	-3	True	ATTAAA	-28	NA	150629577	150623280	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_150625809_150627397_150627593_150629413
H1_mix_00004053	chr1	-	1369	3	FSM	ENSG00000143420.19	ENST00000513281.5	1369	3	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_2	529	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGAACCTTATAGATATC	17	True	NA	NA	False	AGTAAA	-29	NA	150629116	150624621	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_150625809_150627466_150627593_150629060
H1_mix_00004054	chr1	-	861	2	FSM	ENSG00000143420.19	ENST00000362052.7	703	2	0	-158	0	158	multi-exon	FALSE	canonical	3	1345	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACCTAAAGCTGACTGAGG	17	True	NA	NA	False	NA	NA	NA	150629577	150626895	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_150627593_150629413
H1_mix_00004058	chr1	-	1629	8	FSM	ENSG00000143387.14	ENST00000271651.8	1629	8	0	0	0	0	multi-exon	TRUE	canonical	2	19	junction_5	6.19743198956682	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTTGGATACTGTGT	-1	True	NA	1	True	AATAAA	-21	NA	150808260	150796207	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_150796899_150799167_150799274_150799543_150799710_150804020_150804240_150805860_150806017_150806101_150806225_150806685_150806807_150808213
H1_mix_00004059	chr1	-	6722	28	Fusion	ENSG00000143437.21_ENSG00000143387.14	novel	4710	22	NA	NA	0	-3	multi-exon	FALSE	non_canonical	0	0	junction_7	134.315191414519	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTGTGTTGGATACTG	6	True	NA	-2	True	AATAAA	-18	NA	150876705	150796210	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_-_150796899_150799167_150799274_150799543_150799710_150804020_150804240_150805860_150806017_150806101_150806225_150806685_150807110_150809640_150812111_150813171_150813339_150814076_150814237_150816258_150816407_150816787_150816891_150817081_150817203_150817360_150817434_150817919_150818031_150823193_150823346_150826542_150826618_150829092_150829228_150829903_150829981_150831817_150831904_150832333_150832400_150834537_150834641_150836279_150836494_150839440_150839655_150846262_150846308_150852761_150852807_150858348_150858461_150876542
H1_mix_00004060	chr1	-	7866	29	Fusion	ENSG00000143437.21_ENSG00000143387.14	novel	4710	22	NA	NA	0	0	intron_retention	FALSE	canonical	2	19	junction_5	124.978584900268	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTTAATAAATAGCATCTA	6	True	NA	-30	True	AATAAA	-20	NA	150876705	150796238	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_-_150796899_150799167_150799274_150799543_150799710_150804020_150804240_150805860_150806017_150806101_150806225_150806685_150806807_150808213_150812111_150813171_150813339_150814076_150814240_150816258_150816407_150816787_150816891_150817081_150817203_150817360_150817434_150817919_150818031_150823193_150823346_150826542_150826618_150829092_150829228_150829903_150829981_150831817_150831904_150832333_150832400_150834537_150834641_150836279_150836494_150839440_150839655_150842423_150842469_150846262_150846308_150852761_150852807_150858348_150858461_150876542
H1_mix_00004061	chr1	-	4819	22	FSM	ENSG00000143437.21	ENST00000358595.10	4710	22	-109	0	0	0	multi-exon	FALSE	canonical	3	168	junction_18	48.7404621752936	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTCAAGTCTGGACCTGG	3	True	NA	-13	True	ATTAAA	-17	NA	150876708	150809712	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_150812111_150813171_150813339_150814076_150814240_150816258_150816407_150816787_150816891_150817081_150817203_150817360_150817434_150817919_150818031_150823193_150823346_150826542_150826618_150829092_150829228_150829903_150829981_150831817_150831904_150832333_150832400_150834537_150834641_150836279_150836494_150839440_150839655_150842423_150842469_150846262_150846308_150852761_150852807_150858348_150858461_150876542
H1_mix_00004062	chr1	-	4771	21	FSM	ENSG00000143437.21	ENST00000505755.5	2427	21	-96	-2248	0	0	multi-exon	FALSE	canonical	3	159	junction_17	49.9530779832434	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTCAAGTCTGGACCTGG	6	True	NA	-13	True	ATTAAA	-17	NA	150876705	150809712	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_150812111_150813171_150813339_150814076_150814240_150816258_150816407_150816787_150816891_150817081_150817203_150817360_150817434_150817919_150818031_150823193_150823346_150826542_150826618_150829092_150829228_150829903_150829981_150831817_150831904_150832333_150832400_150834537_150834641_150836279_150836494_150839440_150839655_150846262_150846308_150852761_150852807_150858348_150858461_150876542
H1_mix_00004069	chr1	-	1662	6	FSM	ENSG00000143418.20	ENST00000560793.6	1661	6	0	-1	0	1	multi-exon	FALSE	canonical	3	633	junction_4	32.3579974658507	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTAATATTTTCTTTTT	9446	False	NA	-5	True	AATAAA	-33	NA	150967725	150965171	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_150966289_150966475_150966630_150966755_150966863_150967073_150967203_150967391_150967485_150967663
H1_mix_00004070	chr1	-	2171	10	FSM	ENSG00000143418.20	ENST00000345896.8	2170	10	0	-1	0	1	multi-exon	FALSE	canonical	2	2	junction_9	214.899000106826	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTAATATTTTCTTTTT	-6	True	NA	-5	True	AATAAA	-33	NA	150974843	150965171	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_150966289_150966475_150966630_150966755_150966863_150967073_150967203_150967391_150967485_150967663_150967715_150967819_150967878_150968082_150968202_150968394_150968513_150974618
H1_mix_00004071	chr1	-	2545	11	FSM	ENSG00000143418.20	ENST00000271688.10	2544	11	0	-1	0	1	multi-exon	FALSE	canonical	3	14	junction_10	200.546278948277	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTAATATTTTCTTTTT	2168	False	NA	-5	True	AATAAA	-33	NA	150975003	150965171	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_150966289_150966475_150966630_150966755_150966863_150967073_150967203_150967391_150967485_150967663_150967715_150967819_150967878_150968082_150968202_150968394_150968513_150968917_150969132_150974618
H1_mix_00004072	chr1	-	2337	11	FSM	ENSG00000143418.20	ENST00000368954.10	2323	11	0	-14	0	1	multi-exon	FALSE	canonical	3	439	junction_10	84.0509369370741	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTAATATTTTCTTTTT	2	True	NA	-5	True	AATAAA	-33	NA	150974835	150965171	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_150966289_150966475_150966630_150966755_150966863_150967073_150967203_150967391_150967485_150967663_150967715_150967819_150967878_150968082_150968202_150968394_150968513_150968917_150969092_150974618
H1_mix_00004076	chr1	-	3018	5	FSM	ENSG00000197622.13	ENST00000357235.6	3006	5	0	-12	0	0	multi-exon	FALSE	canonical	3	61	junction_2	7.66077672302228	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATTGCAGGTGTGTGTT	-21	True	NA	-4	True	AATAAA	-26	NA	151059622	151050972	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151053328_151054230_151054322_151055015_151055127_151055676_151055994_151059478
H1_mix_00004077	chr1	-	3181	6	FSM	ENSG00000197622.13	ENST00000540998.5	3181	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	24.7353997339845	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATTGCAGGTGTGTGTT	NA	False	NA	-4	True	AATAAA	-26	NA	151059649	151050972	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151053328_151054230_151054322_151055015_151055127_151055676_151055994_151056650_151056787_151059478
H1_mix_00004078	chr1	-	2001	4	FSM	ENSG00000197622.13	ENST00000483763.5	2379	4	-41	419	0	413	multi-exon	FALSE	canonical	3	61	junction_2	8.65383665716478	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTTCCTGCCCTCTGCC	-14	True	NA	NA	False	NA	NA	NA	151059615	151052532	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151053328_151054230_151054322_151055015_151055994_151059478
H1_mix_00004079	chr1	-	3875	19	FSM	ENSG00000143434.17	ENST00000368914.8	3873	19	20	-22	0	0	multi-exon	TRUE	canonical	0	0	junction_18	14.8815280311939	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCCTTAGGAGAATTT	1173	False	NA	4	True	AATAAA	-44	NA	151146611	151131684	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151133518_151134400_151134446_151134619_151134676_151134797_151134876_151135162_151135310_151135590_151135765_151136010_151136164_151136447_151136580_151136856_151137075_151137710_151137800_151137985_151138106_151138315_151138407_151138629_151138732_151139424_151139482_151139637_151139702_151139975_151140091_151142503_151142676_151144384_151144435_151146432
H1_mix_00004080	chr1	-	3317	19	NNC	ENSG00000143434.17	novel	3873	19	NA	NA	-8	11	intron_retention	FALSE	canonical	2	10	junction_1	15.2235400889381	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTGCCTGACTTCACTC	6	True	NA	-5	True	AATACA	-13	NA	151146619	151132055	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_151133319_151134400_151134446_151134619_151134676_151134797_151134876_151135162_151135310_151135590_151135765_151136010_151136164_151136447_151136580_151136856_151137075_151137710_151137800_151137985_151138106_151138315_151138407_151138629_151138732_151139424_151139482_151139637_151139702_151139975_151140091_151142503_151142676_151144384_151144435_151146428
H1_mix_00004081	chr1	-	732	1	ISM	ENSG00000163155.12	ENST00000368908.10	2462	3	5423	0	5423	0	mono-exon	FALSE	NA	NA	NA	NA	NA	257	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAGTAGTTTTATTTC	6075	False	NA	-1	True	ATTAAA	-17	NA	151160479	151159747	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_151159700_151160500
H1_mix_00004082	chr1	-	668	1	FSM	ENSG00000163157.15	ENST00000601585.1	668	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	354	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATTGGTCTGGTGTCACC	694	False	NA	NA	False	AAGAAA	-17	NA	151176284	151175616	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151175600_151176300
H1_mix_00004083	chr1	-	1511	6	FSM	ENSG00000163159.15	ENST00000368892.9	1511	6	0	0	0	0	multi-exon	FALSE	canonical	2	620	junction_5	94.5926001334142	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATCCTTGTATTGACCTT	-29	True	NA	-1	True	TATAAA	-24	NA	151190197	151176303	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151177032_151178000_151178146_151184316_151184494_151185505_151185621_151185797_151185951_151190004
H1_mix_00004085	chr1	-	3934	11	FSM	ENSG00000143393.17	ENST00000368874.8	3934	11	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_10	22.5690052948729	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCCTCTCCTGTGGCCCC	-13	True	NA	-8	True	AATAAA	-20	NA	151327715	151291796	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151293034_151294017_151294139_151294408_151294542_151298807_151299074_151301843_151301968_151302193_151302299_151303540_151303651_151306135_151306364_151307573_151307802_151315572_151316510_151327270
H1_mix_00004086	chr1	-	3703	12	NIC	ENSG00000143393.17	novel	3983	13	NA	NA	35	-4	combination_of_known_junctions	FALSE	canonical	3	50	junction_10	38.0271760153509	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCACTTGTGTCATTTCC	80	False	NA	-11	True	AATAAA	-10	NA	151327622	151292136	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_151293034_151294017_151294139_151294408_151294542_151298807_151299074_151301843_151301968_151302193_151302299_151303540_151303651_151306135_151306364_151307573_151307802_151315572_151316510_151326171_151326374_151327270
H1_mix_00004089	chr1	-	3653	11	NIC	ENSG00000143390.18	novel	3576	11	NA	NA	1	1	intron_retention	FALSE	canonical	3	91	junction_9	85.4850279288718	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGTGTTCCTCCCTA	395	False	NA	-19	True	ATTAAA	-17	NA	151346871	151340638	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_151343179_151343341_151343443_151343680_151343883_151344196_151344279_151344416_151344537_151344727_151344848_151345105_151345189_151345927_151345962_151346204_151346334_151346481_151346607_151346754
H1_mix_00004090	chr1	-	3664	11	NIC	ENSG00000143390.18	novel	3570	11	NA	NA	-15	3	intron_retention	FALSE	canonical	0	0	junction_9	106.940918267986	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTGTTCCTCCCTAGC	379	False	NA	-17	True	ATTAAA	-19	NA	151346887	151340636	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_151343179_151343341_151343443_151343680_151343883_151344196_151344279_151344416_151344537_151344727_151344848_151345105_151345189_151345927_151345962_151346204_151346334_151346488_151346607_151346754
H1_mix_00004091	chr1	-	3579	11	FSM	ENSG00000143390.18	ENST00000290524.8	3576	11	0	-3	0	3	multi-exon	FALSE	canonical	3	91	junction_9	74.9026701793734	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTGTTCCTCCCTAGC	15	True	NA	-17	True	ATTAAA	-19	NA	151347251	151340636	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151343179_151343341_151343443_151343680_151343883_151344196_151344279_151344416_151344537_151344727_151344848_151345105_151345189_151345927_151345962_151346204_151346334_151346481_151346607_151347210
H1_mix_00004095	chr1	-	1965	11	FSM	ENSG00000143416.21	ENST00000493560.5	1963	11	0	-2	0	2	multi-exon	FALSE	canonical	0	0	junction_8	75.4035145069512	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTTGTCTTTGGGGGCC	9	False	NA	-38	True	AATAAA	-22	NA	151372694	151364301	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151364706_151364925_151365045_151365188_151365282_151365562_151365685_151365767_151365847_151366274_151366454_151366721_151366905_151368198_151368320_151369003_151369555_151369712_151369770_151372637
H1_mix_00004096	chr1	-	1724	12	FSM	ENSG00000143416.21	ENST00000368868.10	1722	12	0	-2	0	2	multi-exon	FALSE	canonical	0	0	junction_8	73.4852546068128	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTTGTCTTTGGGGGCC	-2	True	NA	-38	True	AATAAA	-22	NA	151372705	151364301	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151364706_151364925_151365045_151365188_151365282_151365562_151365685_151365767_151365847_151366274_151366454_151366721_151366905_151368198_151368320_151369003_151369190_151369441_151369555_151369712_151369770_151372637
H1_mix_00004097	chr1	-	2164	10	FSM	ENSG00000143416.21	ENST00000470345.5	2128	10	6	-42	0	37	multi-exon	FALSE	canonical	0	0	junction_8	79.4552440212044	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCTGCCTACCCTTTGT	3	True	NA	-3	True	NA	NA	NA	151372700	151364266	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151364706_151364925_151365045_151365188_151365282_151365562_151365685_151365767_151365847_151366274_151366454_151366721_151366905_151368198_151368320_151369003_151369770_151372637
H1_mix_00004099	chr1	-	6153	17	FSM	ENSG00000143442.22	ENST00000392723.5	6152	17	0	-1	0	1	multi-exon	FALSE	canonical	3	19	junction_16	29.5068185975716	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGTTGAGACTGAATGT	NA	False	NA	-6	True	AATAAA	-21	NA	151442204	151402722	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151406465_151406606_151406632_151406910_151407024_151407234_151407292_151408099_151408241_151408408_151408582_151408693_151408829_151411624_151411772_151412295_151412397_151423396_151423552_151423948_151424287_151424954_151425062_151427822_151428042_151428122_151428414_151429602_151429712_151430665_151430842_151442080
H1_mix_00004101	chr1	-	10756	19	NIC	ENSG00000143442.22	novel	6655	19	NA	NA	-4269	1	combination_of_known_junctions	FALSE	canonical	3	49	junction_18	22.4057008838993	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGTTGAGACTGAATGT	NA	False	NA	-6	True	AATAAA	-21	NA	151446747	151402722	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_151406465_151406606_151406632_151406910_151407024_151407234_151407292_151408099_151408241_151408408_151408582_151408693_151408829_151411624_151411772_151412295_151412397_151423396_151423552_151423948_151424287_151424954_151425062_151427822_151428042_151428122_151428414_151429602_151429712_151430665_151430842_151440927_151441087_151442080_151442206_151442304
H1_mix_00004102	chr1	-	6651	19	FSM	ENSG00000143442.22	ENST00000271715.7	6655	19	5	-1	5	1	multi-exon	FALSE	canonical	3	77	junction_18	17.7434564533966	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGTTGAGACTGAATGT	-17	True	NA	-6	True	AATAAA	-21	NA	151459489	151402722	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151406465_151406606_151406632_151406910_151407024_151407234_151407292_151408099_151408241_151408408_151408582_151408693_151408829_151411624_151411772_151412295_151412397_151423396_151423552_151423948_151424287_151424954_151425062_151427822_151428042_151428122_151428414_151429602_151429712_151430665_151430842_151440927_151441087_151442080_151442206_151459151
H1_mix_00004105	chr1	-	882	6	FSM	ENSG00000143436.11	ENST00000368829.3	882	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	230.753028149145	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCACTGGGGCAGGGAAG	7	True	NA	NA	False	NA	NA	NA	151763484	151759874	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151760182_151760815_151760900_151762104_151762156_151762375_151762501_151762989_151763147_151763326
H1_mix_00004109	chr1	-	2332	14	FSM	ENSG00000182134.17	ENST00000368827.10	2318	14	0	-14	0	14	multi-exon	FALSE	canonical	3	12	junction_1	69.448972370465	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAGGAAGTTCACTGATT	-21	True	NA	NA	False	GATAAA	-29	NA	151790522	151771549	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151771987_151774412_151774505_151774709_151774807_151775064_151775167_151775391_151775544_151775819_151775885_151776095_151776269_151776438_151776600_151778684_151779007_151779102_151779243_151779950_151780141_151781480_151781588_151782898_151783050_151790379
H1_mix_00004110	chr1	-	4582	12	ISM	ENSG00000182134.17	ENST00000368824.8	2792	13	7451	-1911	0	-19	3prime_fragment	FALSE	canonical	3	232	junction_7	18.6463387938014	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAAACAGCCTAACAAAG	7604	False	NA	NA	False	AATATA	-4	NA	151783049	151771582	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_151774505_151774709_151774807_151775064_151775167_151775391_151775544_151775819_151775885_151776095_151776269_151776438_151776600_151778684_151779007_151779102_151779243_151779950_151780141_151781480_151781588_151782898
H1_mix_00004111	chr1	-	2640	13	ISM	ENSG00000182134.17	ENST00000525790.5	2217	14	40	3387	-15	0	5prime_fragment	FALSE	canonical	3	29	junction_9	66.8494889035561	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTAAAACCAAATTCTG	205	False	NA	-15	True	AATAAA	-14	NA	151790448	151773493	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_151774505_151774709_151774807_151775064_151775167_151775391_151775544_151775819_151775885_151776095_151776269_151776438_151776600_151778684_151779007_151779102_151779243_151780050_151780141_151781480_151781588_151782898_151783050_151790379
H1_mix_00004112	chr1	-	2595	14	NIC	ENSG00000182134.17	novel	3093	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_1	57.7259389154359	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTAAAACCAAATTCTG	13	True	NA	-15	True	AATAAA	-14	NA	151790488	151773493	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_151774228_151774412_151774505_151774709_151774807_151775064_151775167_151775391_151775544_151775819_151775885_151776095_151776269_151776438_151776600_151778684_151779007_151779102_151779243_151779950_151780141_151781480_151781588_151782898_151783050_151790379
H1_mix_00004113	chr1	-	2792	13	FSM	ENSG00000182134.17	ENST00000368824.8	2792	13	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_12	28.9888628039574	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTAAAACCAAATTCTG	1	True	NA	-15	True	AATAAA	-14	NA	151790500	151773493	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151774505_151774709_151774807_151775064_151775167_151775391_151775544_151775819_151775885_151776095_151776269_151776438_151776600_151778684_151779007_151779102_151779243_151779950_151780141_151781480_151781588_151782898_151783050_151790379
H1_mix_00004114	chr1	-	3000	13	FSM	ENSG00000182134.17	ENST00000458431.6	2768	13	-27	-205	-10	186	multi-exon	FALSE	canonical	3	100	junction_12	47.0841445357847	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGCGCTTTGGGAGGCT	-31	True	NA	NA	False	NA	NA	NA	151790532	151773292	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151774505_151774709_151774807_151775064_151775167_151775391_151775544_151775819_151775885_151776095_151776269_151776438_151776600_151778684_151779007_151779102_151779243_151779950_151780141_151781480_151781588_151782898_151783050_151790404
H1_mix_00004118	chr1	-	1832	7	FSM	ENSG00000159445.13	ENST00000471464.5	1832	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_4	24.3361870472759	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCTGTACTGTTGTTT	10	True	NA	0	True	ATTAAA	-19	NA	151909502	151874054	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151874929_151877000_151877126_151888272_151888384_151889213_151889374_151889982_151890215_151895007_151895195_151909359
H1_mix_00004120	chr1	-	510	3	NNC	ENSG00000159445.13	novel	643	2	NA	NA	82	-2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	2.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCCTATTGTCAAGAATAA	6	True	NA	NA	False	AATAAA	-22	NA	151909420	151894831	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_151895195_151907320_151907407_151909359
H1_mix_00004122	chr1	-	683	3	FSM	ENSG00000197747.9	ENST00000368811.8	671	3	0	-12	0	12	multi-exon	FALSE	canonical	3	2961	junction_2	0.5	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTGTTCCCTCAGAA	-22	True	NA	-4	True	AATAAA	-36	NA	151993859	151982902	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151983325_151986098_151986252_151993751
H1_mix_00004124	chr1	-	439	3	FSM	ENSG00000197956.10	ENST00000368719.9	434	3	0	-5	0	5	multi-exon	FALSE	canonical	3	99	junction_2	24.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTCCTGGCTTCCGAATGA	1	True	NA	-1	True	AATAAA	-25	NA	153535991	153534593	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153534831_153535201_153535361_153535948
H1_mix_00004126	chr1	-	756	2	FSM	ENSG00000196154.12	ENST00000481009.1	755	2	0	-1	0	1	multi-exon	FALSE	canonical	3	246	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGAGAGACTCTGGGGG	-9	True	NA	2	True	AATAAA	-26	NA	153545097	153543611	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153543924_153544653
H1_mix_00004127	chr1	-	511	3	FSM	ENSG00000196154.12	ENST00000368716.9	513	3	5	-3	1	3	multi-exon	FALSE	canonical	3	214	junction_2	16	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGATGGTTTGAGAGACTC	3	True	NA	-4	True	AATAAA	-20	NA	153545801	153543617	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153543924_153544653_153544810_153545752
H1_mix_00004129	chr1	-	586	4	FSM	ENSG00000196154.12	ENST00000354332.8	566	4	-20	0	-16	0	multi-exon	FALSE	canonical	3	7	junction_3	111.505854355525	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGAGAGACTCTGGGG	4272	False	NA	1	True	AATAAA	-25	NA	153545822	153543612	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153543924_153544653_153544810_153545469_153545519_153545752
H1_mix_00004131	chr1	-	1529	3	FSM	ENSG00000188643.11	ENST00000368705.2	956	3	-14	-559	-14	83	multi-exon	FALSE	canonical	3	27	junction_2	409.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGCCAGAACTCCTAAAT	-1	True	NA	77	True	NA	NA	NA	153609358	153606802	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153607693_153607998_153608178_153608898
H1_mix_00004132	chr1	-	1180	3	FSM	ENSG00000188643.11	ENST00000368704.5	1146	3	-8	-26	-1	26	multi-exon	FALSE	canonical	3	36	junction_2	405	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGGCCCTGTGATAAGAG	12	True	NA	20	True	NA	NA	NA	153609345	153606859	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153607693_153607998_153608178_153609177
H1_mix_00004133	chr1	-	1176	3	FSM	ENSG00000188643.11	ENST00000368706.9	1172	3	0	-4	0	4	multi-exon	FALSE	canonical	3	769	junction_2	38.5	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGCTTTGGTGGTCTTAG	-13	True	NA	-2	True	ATTAAA	-25	NA	153613137	153606881	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153607693_153607998_153608178_153612951
H1_mix_00004134	chr1	-	1054	4	FSM	ENSG00000189334.9	ENST00000344616.4	1054	4	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_3	49.8687165354081	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTGTCTTGACTGGACA	-3	True	NA	-9	True	AATAAA	-21	NA	153616325	153614254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153615023_153615234_153615382_153615828_153615937_153616294
H1_mix_00004135	chr1	-	713	4	FSM	ENSG00000189171.15	ENST00000440685.7	710	4	0	-3	0	3	multi-exon	FALSE	canonical	3	9	junction_3	220.467684706852	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCATCCTGATTTCTTTTC	-4	True	NA	-5	True	AATAAA	-37	NA	153628248	153618783	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153619039_153626319_153626534_153627482_153627599_153628120
H1_mix_00004136	chr1	-	599	3	FSM	ENSG00000189171.15	ENST00000392623.5	579	3	0	-20	0	3	multi-exon	TRUE	canonical	3	36	junction_2	255	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCATCCTGATTTCTTTTC	23	True	NA	-5	True	AATAAA	-37	NA	153627268	153618783	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153619039_153626319_153626534_153627138
H1_mix_00004137	chr1	-	587	3	FSM	ENSG00000189171.15	ENST00000476133.6	477	3	-121	11	-121	-2	multi-exon	FALSE	canonical	3	327	junction_2	109.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAACACAAATGTTTCTTA	6806	False	NA	-31	True	AATAAA	-11	NA	153627626	153618809	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153619039_153626319_153626534_153627482
H1_mix_00004138	chr1	-	1029	7	NIC	ENSG00000271853.5	novel	753	7	NA	NA	58	7528	intron_retention	FALSE	canonical	0	0	junction_5	214.252965751546	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATGTTTCTTACTTACA	441	False	NA	-25	True	AATAAA	-17	NA	153633991	153618803	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_153619039_153626319_153626534_153627482_153627599_153631010_153631112_153632033_153632241_153633035_153633158_153633957
H1_mix_00004140	chr1	-	1144	8	NIC	ENSG00000271853.5	novel	753	7	NA	NA	64	7528	intron_retention	FALSE	canonical	1	1	junction_5	203.630217075272	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATGTTTCTTACTTACA	156	False	NA	-25	True	AATAAA	-17	NA	153634276	153618803	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_153619039_153626319_153626534_153627482_153627599_153628120_153628238_153631010_153631079_153632033_153632241_153633957_153634111_153634242
H1_mix_00004141	chr1	-	1852	14	FSM	ENSG00000143621.17	ENST00000361891.9	1852	14	0	0	0	0	multi-exon	FALSE	canonical	3	3292	junction_13	246.555225639086	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTATTCAAGCCAGTG	-11	True	NA	-8	True	AATAAA	-19	NA	153670993	153661787	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153662557_153662704_153662796_153663018_153663134_153663214_153663277_153664042_153664131_153664395_153664475_153665219_153665337_153665662_153665729_153667554_153667658_153667999_153668078_153668452_153668558_153669835_153669879_153670170_153670231_153670917
H1_mix_00004142	chr1	-	1906	14	FSM	ENSG00000143621.17	ENST00000615950.4	1906	14	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_11	1023.57958154865	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTATTCAAGCCAGTG	NA	False	NA	-8	True	AATAAA	-19	NA	153671028	153661787	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153662557_153662704_153662796_153663018_153663134_153663214_153663277_153664042_153664131_153664395_153664475_153665219_153665337_153665662_153665729_153667554_153667658_153667999_153668078_153668452_153668577_153669835_153669879_153670170_153670231_153670917
H1_mix_00004143	chr1	-	1039	5	FSM	ENSG00000143621.17	ENST00000480213.1	1008	5	0	-31	0	31	multi-exon	FALSE	canonical	3	3818	junction_3	139.073721457362	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGTCTTTCTGGTTGGT	6508	False	NA	-33	True	ATTAAA	-18	NA	153664474	153662033	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153662557_153662704_153662796_153663018_153663277_153664042_153664131_153664395
H1_mix_00004144	chr1	-	7676	4	ISM	ENSG00000143614.10	ENST00000368655.5	7475	11	107863	-1	2419	1	3prime_fragment	FALSE	canonical	3	29	junction_3	5.79271573232759	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTGTGGCTTGTGCTTT	4608	False	NA	-3	True	AATAAA	-22	NA	153815109	153804723	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_153810311_153811730_153811849_153812021_153812133_153813249
H1_mix_00004145	chr1	-	7453	11	FSM	ENSG00000143614.10	ENST00000368655.5	7475	11	22	0	18	0	multi-exon	FALSE	canonical	3	13	junction_5	9.27146158919941	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCCTGTGGCTTGTGCTT	-5	True	NA	-4	True	AATAAA	-21	NA	153922950	153804724	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153810311_153811730_153811849_153812021_153812133_153813249_153813453_153816272_153816589_153817371_153817543_153818039_153818172_153818790_153818923_153819605_153819736_153828012_153828349_153922732
H1_mix_00004146	chr1	-	992	2	FSM	ENSG00000143614.10	ENST00000634645.1	507	2	-562	77	-562	-77	multi-exon	FALSE	canonical	3	43	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTAGCAGCCCCTTTAAG	6880	False	NA	NA	False	NA	NA	NA	153812837	153811672	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153811849_153812021
H1_mix_00004148	chr1	-	5707	28	NNC	ENSG00000198837.10	novel	5728	28	NA	NA	23	-2	at_least_one_novel_splicesite	FALSE	canonical	3	151	junction_24	25.3867749072631	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCGGCCTCCTGTTCCC	5	True	NA	-9	True	AGTAAA	-18	NA	153946695	153929502	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_153930443_153930538_153930604_153930691_153930858_153930946_153931065_153932203_153932441_153932641_153932778_153932860_153933031_153933196_153933320_153933482_153933872_153934134_153934303_153934759_153934965_153936059_153936189_153936541_153936749_153937487_153937615_153937723_153937864_153938899_153939046_153939588_153939805_153940155_153940257_153940430_153940607_153940903_153941049_153941230_153941290_153941373_153941441_153941868_153942114_153942186_153942357_153942555_153942626_153942877_153943131_153944057_153944398_153946296
H1_mix_00004149	chr1	-	5726	28	FSM	ENSG00000198837.10	ENST00000361217.9	5728	28	0	2	0	-2	multi-exon	FALSE	canonical	0	0	junction_27	47.6877129858591	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCGGCCTCCTGTTCCC	-18	True	NA	-9	True	AGTAAA	-18	NA	153946718	153929502	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153930443_153930538_153930604_153930691_153930858_153930946_153931065_153932203_153932441_153932641_153932778_153932860_153933031_153933196_153933320_153933482_153933872_153934134_153934303_153934759_153934965_153936059_153936189_153936541_153936749_153937487_153937615_153937723_153937864_153938899_153939046_153939588_153939805_153940155_153940257_153940430_153940607_153940903_153941049_153941230_153941290_153941373_153941441_153941868_153942114_153942186_153942357_153942555_153942626_153942877_153943131_153944057_153944398_153946300
H1_mix_00004155	chr1	-	2344	13	FSM	ENSG00000160741.17	ENST00000461638.6	2343	13	0	-1	0	1	multi-exon	TRUE	canonical	0	0	junction_12	61.5968072765681	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGTGTGGTTAGTTATT	9112	False	NA	-2	True	AATAAA	-16	NA	153954989	153947673	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153948330_153948457_153948645_153948833_153948901_153949114_153949385_153951259_153951667_153952017_153952263_153952396_153952447_153952570_153952651_153952804_153952835_153953265_153953370_153953537_153953607_153954254_153954317_153954872
H1_mix_00004156	chr1	-	2632	14	FSM	ENSG00000160741.17	ENST00000368633.2	2631	14	0	-1	0	1	multi-exon	FALSE	canonical	0	0	junction_11	45.3281265138373	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGTGTGGTTAGTTATT	0	True	NA	-2	True	AATAAA	-16	NA	153958612	153947673	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153948330_153948457_153948645_153949114_153949385_153951259_153951667_153952017_153952263_153952396_153952447_153952570_153952636_153952804_153952835_153953265_153953370_153953537_153953607_153954254_153954317_153954872_153954990_153955064_153955167_153958344
H1_mix_00004157	chr1	-	2767	13	NNC	ENSG00000160741.17	novel	2631	14	NA	NA	-584	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	106	junction_7	22.0055232965625	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCTTGGTGTGGTTAGT	8528	False	NA	-6	True	AATAAA	-12	NA	153955573	153947677	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_153948330_153948457_153948645_153949114_153949385_153951259_153951667_153952017_153952263_153952396_153952447_153952570_153952636_153952804_153952835_153953265_153953370_153953537_153953607_153954254_153954315_153954870_153954990_153955064
H1_mix_00004160	chr1	-	2253	14	NIC	ENSG00000160741.17	novel	2263	12	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	66.9655921540636	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAACCCTTGGTGTGGTTA	9586	False	NA	-8	True	AATAAA	-10	NA	153958564	153947679	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_153948330_153948457_153948645_153948833_153948901_153949114_153949385_153952017_153952263_153952396_153952447_153952570_153952651_153952804_153952835_153953265_153953370_153953537_153953607_153954254_153954317_153954872_153954990_153955064_153955167_153958344
H1_mix_00004161	chr1	-	1050	2	FSM	ENSG00000160741.17	ENST00000524997.1	1050	2	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGGCATGGGCAACAGTC	6516	False	NA	NA	False	NA	NA	NA	153952096	153949171	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153949385_153951259
H1_mix_00004165	chr1	-	2734	3	FSM	ENSG00000143570.19	ENST00000368623.7	2723	3	0	-11	0	0	multi-exon	FALSE	canonical	3	2202	junction_1	53	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGATTCGTTTGTTTTGGG	4675	False	NA	-1	True	AATAAA	-27	NA	153963475	153959098	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153960755_153962219_153962351_153962528
H1_mix_00004166	chr1	-	2322	4	FSM	ENSG00000143570.19	ENST00000621013.4	2322	4	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	1031.86950079294	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGATTCGTTTGTTTTGGG	4658	False	NA	-1	True	AATAAA	-27	NA	153963492	153959098	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153960755_153962219_153962351_153962528_153962748_153963176
H1_mix_00004167	chr1	-	2049	4	FSM	ENSG00000143570.19	ENST00000356205.9	2038	4	0	-11	0	0	multi-exon	FALSE	canonical	3	1464	junction_3	375.383655596363	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGATTCGTTTGTTTTGGG	-6	True	NA	-1	True	AATAAA	-27	NA	153963537	153959098	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153960755_153962219_153962351_153962528_153962748_153963494
H1_mix_00004168	chr1	-	2398	4	FSM	ENSG00000143570.19	ENST00000368621.5	2398	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_3	1021.50781799369	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTACAGTATCTGATTC	4688	False	NA	-13	True	AATAAA	-15	NA	153963462	153959110	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153960755_153962219_153962351_153962528_153962748_153963058
H1_mix_00004169	chr1	-	2427	5	FSM	ENSG00000143570.19	ENST00000310483.10	2427	5	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	1120.62683351774	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGTACAGTATCTGATT	16	True	NA	-14	True	AATAAA	-14	NA	153967712	153959111	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153960755_153962219_153962351_153962528_153962748_153963596_153963704_153967385
H1_mix_00004170	chr1	-	1273	5	FSM	ENSG00000143543.15	ENST00000271843.9	1273	5	0	0	0	0	multi-exon	FALSE	canonical	3	951	junction_2	15.9902313929474	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGAGGTACCCTCTCA	-13	True	NA	-2	True	AATAAA	-21	NA	153977674	153974268	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153974836_153975825_153975906_153976692_153976776_153976975_153977014_153977169
H1_mix_00004171	chr1	-	1717	12	FSM	ENSG00000285641.1	ENST00000648869.1	1706	12	0	-11	0	11	multi-exon	FALSE	canonical	2	9	junction_4	253.633528820913	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGTTCAAAAGGTGAGTG	5847	False	NA	NA	False	NA	NA	NA	153986246	153975838	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153975906_153976692_153976776_153976975_153977014_153977169_153978017_153982038_153982177_153982390_153982445_153982534_153982601_153982718_153982809_153983218_153983297_153983520_153983582_153984720_153984782_153986112
H1_mix_00004173	chr1	-	1164	8	FSM	ENSG00000143545.10	ENST00000368575.5	1164	8	0	0	0	0	multi-exon	FALSE	canonical	3	761	junction_7	33.1003421894884	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTGTTTTGGGTAACTT	1	True	NA	-33	True	ATTAAA	-20	NA	153986339	153981649	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153982177_153982390_153982445_153982534_153982601_153982718_153982809_153983218_153983297_153983520_153983582_153984720_153984782_153986112
H1_mix_00004174	chr1	-	2122	9	NNC	ENSG00000143549.21	novel	1582	9	NA	NA	0	29563	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1774.68803156358	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTCCTTCCTTCCTTCC	9	True	NA	NA	False	AAAACA	-11	NA	154183174	154125740	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_154125786_154156363_154157722_154170399_154170470_154170648_154170712_154172028_154172105_154172907_154172979_154173083_154173202_154176114_154176249_154182987
H1_mix_00004176	chr1	-	2082	9	NNC	ENSG00000143549.21	novel	1582	9	NA	NA	0	29553	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1774.68803156358	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCCTCCCTCCCTTCCTT	8953	False	NA	NA	False	AAAACA	-1	NA	154183147	154125750	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_154125783_154156363_154157722_154170399_154170470_154170648_154170712_154172028_154172105_154172907_154172979_154173083_154173202_154176114_154176249_154182987
H1_mix_00004177	chr1	-	2141	9	NNC	ENSG00000143549.21	novel	1582	9	NA	NA	0	29553	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1774.68803156358	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCCTCCCTCCCTTCCTT	11	True	NA	NA	False	AAAACA	-1	NA	154183205	154125750	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_154125784_154156363_154157722_154170399_154170470_154170648_154170712_154172028_154172105_154172907_154172979_154173083_154173202_154176114_154176249_154182987
H1_mix_00004178	chr1	-	3149	8	FSM	ENSG00000143549.21	ENST00000368533.8	3148	8	0	-1	0	1	multi-exon	FALSE	canonical	3	4813	junction_2	331.56118036726	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGCTTGTTCCTTACT	-6	True	NA	-4	True	ATTAAA	-32	NA	154183189	154155306	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154157722_154170399_154170470_154170648_154170712_154172028_154172105_154172907_154172979_154173083_154173202_154176114_154176249_154182987
H1_mix_00004180	chr1	-	1115	8	FSM	ENSG00000143549.21	ENST00000368531.6	1115	8	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	1822.92445016803	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGTAACTGCTTCATC	8970	False	NA	0	True	AATAAA	-17	NA	154183130	154158608	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154159049_154170399_154170470_154170648_154170712_154172028_154172105_154172907_154172979_154173083_154173202_154176114_154176249_154182987
H1_mix_00004182	chr1	-	1576	5	FSM	ENSG00000143612.21	ENST00000362076.8	1551	5	29	-54	0	30	multi-exon	FALSE	canonical	3	78	junction_3	310.170416867889	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCTGCACATTTCTAACA	-19	True	NA	35	True	AATAAA	-18	NA	154220590	154206665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154207649_154212319_154212379_154212457_154212625_154214456_154214575_154220341
H1_mix_00004184	chr1	-	1624	6	FSM	ENSG00000143612.21	ENST00000350592.7	1610	6	0	-14	0	0	multi-exon	FALSE	canonical	3	534	junction_5	117.559176587793	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATAGTTGTCTTTTAAT	5	True	NA	-5	True	AATAAA	-36	NA	154220624	154206705	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154207649_154212319_154212379_154212457_154212625_154213892_154213947_154214456_154214575_154220341
H1_mix_00004185	chr1	-	1861	8	FSM	ENSG00000143612.21	ENST00000470180.2	1861	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	337.678388229912	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATAGTTGTCTTTTAAT	-8	True	NA	-5	True	AATAAA	-36	NA	154220637	154206705	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154207649_154212319_154212379_154212457_154212625_154213181_154213304_154213892_154213947_154214456_154214575_154219835_154219938_154220341
H1_mix_00004187	chr1	-	1278	6	FSM	ENSG00000143612.21	ENST00000368518.5	1278	6	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_5	236.896264217062	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAATAGTTTTTCAGCACA	951	False	NA	5	True	AATAAA	-28	NA	154220533	154211733	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154212379_154212457_154212625_154213892_154213947_154214456_154214575_154219835_154219938_154220341
H1_mix_00004188	chr1	-	872	5	FSM	ENSG00000143612.21	ENST00000368516.1	872	5	0	0	0	0	multi-exon	FALSE	canonical	3	534	junction_4	130.417598505723	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATCCCAGCACTTTGGGA	1	True	NA	78	True	NA	NA	NA	154220628	154212132	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154212379_154212457_154212625_154213892_154213947_154214456_154214575_154220341
H1_mix_00004189	chr1	-	3248	13	FSM	ENSG00000160714.10	ENST00000292211.5	3239	13	0	-9	0	9	multi-exon	FALSE	canonical	3	256	junction_1	27.0774352552083	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATAAAATTATTTGAAGAA	24	True	NA	NA	False	AATAAA	-22	NA	154558662	154548567	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154550470_154550937_154551005_154551396_154551493_154551770_154551820_154551920_154551980_154552092_154552184_154552403_154552465_154552735_154552821_154553031_154553173_154554734_154554786_154555427_154555533_154555859_154555965_154558226
H1_mix_00004190	chr1	-	280	3	FSM	ENSG00000160714.10	ENST00000491572.1	235	3	-45	0	-45	0	multi-exon	FALSE	canonical	3	313	junction_1	17	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCACGAAAAAAACGGTGAG	7004	False	NA	NA	False	AATACA	-43	NA	154551902	154550952	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154551005_154551396_154551493_154551770
H1_mix_00004191	chr1	-	6753	16	FSM	ENSG00000160710.18	ENST00000681235.1	6753	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	335.467037625656	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTCACGCCATTCTCCTG	-2	True	NA	NA	False	NA	NA	NA	154608181	154581694	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154585044_154585216_154585345_154585752_154585866_154586180_154586364_154588124_154588259_154588550_154588674_154589368_154589463_154589756_154589929_154590261_154590410_154596804_154596996_154597122_154597268_154597827_154597977_154598401_154598586_154601040_154602249_154602384_154602627_154607991
H1_mix_00004192	chr1	-	6610	15	FSM	ENSG00000160710.18	ENST00000368474.9	6610	15	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_14	204.329428389849	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTAAGTCCTGGTTTCTT	-7	True	NA	-3	True	AATAAA	-30	NA	154608186	154582056	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154585044_154585216_154585345_154585752_154585866_154586180_154586364_154588124_154588259_154588550_154588674_154589368_154589463_154589756_154589929_154590183_154590410_154596804_154596996_154597122_154597268_154597827_154597977_154598401_154598586_154601040_154602627_154607991
H1_mix_00004193	chr1	-	6962	16	FSM	ENSG00000160710.18	ENST00000681901.1	6962	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	294.170124625568	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTCACGCCATTCTCCTG	405	False	NA	NA	False	NA	NA	NA	154608312	154581694	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154585044_154585216_154585345_154585752_154585866_154586180_154586364_154588124_154588259_154588550_154588674_154589368_154589463_154589756_154589929_154590183_154590410_154596804_154596996_154597122_154597268_154597827_154597977_154598401_154598586_154601040_154602249_154602384_154602627_154607991
H1_mix_00004194	chr1	-	6519	15	FSM	ENSG00000160710.18	ENST00000368471.8	6519	15	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_14	153.589517207127	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAGAAAGTTTTAAGTC	6	True	NA	-13	True	AATAAA	-20	NA	154627968	154582066	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154585044_154585216_154585345_154585752_154585866_154586180_154586364_154588124_154588259_154588550_154588674_154589368_154589463_154589756_154589929_154590183_154590410_154596804_154596996_154597122_154597268_154597827_154597977_154598401_154598586_154601040_154602627_154627854
H1_mix_00004195	chr1	-	7272	13	FSM	ENSG00000160710.18	ENST00000681786.1	7272	13	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_12	212.917221134307	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCTGAATTCTTAGAAAG	-25	True	NA	-22	True	AATAAA	-11	NA	154608204	154582075	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154585044_154585216_154585866_154586180_154586364_154588124_154588259_154588550_154588674_154589368_154589463_154589756_154590410_154596804_154596996_154597122_154597268_154597827_154597977_154598401_154598586_154601040_154602627_154607991
H1_mix_00004197	chr1	-	7147	13	FSM	ENSG00000160710.18	ENST00000679805.1	7146	13	0	-1	0	0	multi-exon	FALSE	canonical	3	30	junction_12	245.190897850815	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCTGAATTCTTAGAAAG	-30	False	NA	-22	True	AATAAA	-11	NA	154628004	154582075	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154585044_154585216_154585866_154586180_154586364_154588124_154588674_154589368_154589463_154589756_154589929_154590183_154590410_154596804_154596996_154597122_154597268_154597827_154597977_154598401_154598586_154601040_154602627_154627953
H1_mix_00004198	chr1	-	6343	15	FSM	ENSG00000160710.18	ENST00000529168.2	6343	15	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_8	272.495534507505	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTGACTCCAAGAGCAGA	9	True	NA	54	True	NA	NA	NA	154608170	154582229	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154585044_154585216_154585345_154585752_154585866_154586180_154586364_154588124_154588259_154588550_154588674_154589368_154589463_154589756_154589929_154590261_154590410_154596804_154596996_154597122_154597268_154597827_154597977_154598401_154598586_154601040_154602627_154607991
H1_mix_00004205	chr1	-	3216	11	FSM	ENSG00000163346.17	ENST00000368463.8	3207	11	0	-9	0	5	multi-exon	FALSE	canonical	3	92	junction_2	15.2065775242163	459	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTGGGCACTCAAAAGT	20	True	NA	-15	True	AATAAA	-26	NA	154956099	154944070	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154945118_154945571_154946804_154947416_154947549_154947641_154947713_154947981_154948006_154948132_154948367_154951231_154951398_154951470_154951536_154951794_154951922_154953670_154953758_154956068
H1_mix_00004207	chr1	-	3472	12	FSM	ENSG00000160691.19	ENST00000368445.9	3472	12	0	0	0	0	multi-exon	TRUE	canonical	3	447	junction_3	209.930881974548	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCCTCTTAACCCTTC	4	True	NA	-14	True	ATTAAA	-17	NA	154970741	154962297	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154963932_154965542_154965782_154965945_154966078_154966161_154966232_154966318_154966518_154967670_154967798_154967979_154968032_154968203_154968258_154968494_154968615_154968770_154968835_154969377_154969449_154970031
H1_mix_00004210	chr1	-	3059	13	FSM	ENSG00000160691.19	ENST00000368450.5	3059	13	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_12	293.221036743425	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCCTCTTAACCCTTC	6	True	NA	-14	True	ATTAAA	-17	NA	154974376	154962297	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154963932_154965542_154965782_154965945_154966078_154966161_154966232_154966318_154966518_154967670_154967798_154967979_154968032_154968203_154968258_154968494_154968615_154968770_154968835_154969377_154969449_154970031_154970200_154974247
H1_mix_00004218	chr1	-	785	4	FSM	ENSG00000163463.13	ENST00000487350.5	785	4	0	0	0	0	multi-exon	FALSE	canonical	3	1654	junction_3	13.6950923894494	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGAGTTGTGATATG	5699	False	NA	-10	True	AATAAA	-15	NA	155173238	155169407	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155169561_155169790_155169858_155172564_155172629_155172737
H1_mix_00004219	chr1	-	523	5	FSM	ENSG00000163463.13	ENST00000295682.6	523	5	0	0	0	0	multi-exon	FALSE	canonical	3	1183	junction_4	208.904733072279	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGAGTTGTGATATG	-22	True	NA	-10	True	AATAAA	-15	NA	155173304	155169407	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155169561_155169790_155169858_155172564_155172629_155172737_155172893_155173220
H1_mix_00004220	chr1	-	876	5	FSM	ENSG00000163463.13	ENST00000491084.5	598	5	-278	0	-278	0	multi-exon	FALSE	canonical	3	66	junction_4	692.344567394011	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGAGTTGTGATATG	5184	False	NA	-10	True	AATAAA	-15	NA	155173753	155169407	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155169561_155169790_155169858_155172564_155172629_155172737_155172893_155173316
H1_mix_00004222	chr1	-	3263	4	FSM	ENSG00000163463.13	ENST00000490672.2	3263	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	697.014745579716	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGAGTTGTGATAT	-22	True	NA	-11	True	AATAAA	-14	NA	155173304	155169408	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155169561_155169790_155172490_155172564_155172893_155173220
H1_mix_00004223	chr1	-	1411	2	FSM	ENSG00000169231.13	ENST00000498500.1	768	2	-390	-253	-390	253	multi-exon	FALSE	canonical	3	49	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCCGGGATGGAGAGCCAG	5271	False	NA	NA	False	NA	NA	NA	155196832	155195334	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155195900_155195986
H1_mix_00004224	chr1	-	3145	23	FSM	ENSG00000169231.13	ENST00000368378.7	3145	23	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	6.557438524302	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTGCAACTGCTTATTT	20	True	NA	-3	True	CATAAA	-19	NA	155207897	155195587	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155195900_155195986_155196127_155197040_155197214_155197462_155197660_155197879_155197929_155198041_155198221_155198408_155198603_155199803_155199857_155199994_155200114_155200450_155200611_155200896_155201005_155201093_155201205_155201416_155201570_155201956_155202035_155202260_155202402_155202811_155202961_155203085_155203138_155203222_155203306_155203512_155203540_155204854_155204958_155205059_155205317_155206199_155206407_155207797
H1_mix_00004226	chr1	-	521	4	ISM	ENSG00000160766.15	ENST00000462587.2	1797	10	8	3072	-1	-2529	5prime_fragment	FALSE	canonical	2	2	junction_3	35.3490531069158	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACATCTACCACCAGACC	-1	True	NA	NA	False	NA	NA	NA	155219015	155216896	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_155217030_155217239_155217374_155217963_155218050_155218847
H1_mix_00004227	chr1	-	2291	11	FSM	ENSG00000177628.16	ENST00000368373.8	2291	11	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	17.3078017090559	245	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGTGAGTGGCTTTAT	2	True	NA	NA	False	NA	NA	NA	155241249	155234451	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155235101_155235194_155235312_155235680_155235845_155236244_155236470_155237340_155237579_155238133_155238307_155238516_155238651_155239615_155239763_155239885_155240078_155240629_155240718_155241085
H1_mix_00004229	chr1	-	3195	12	FSM	ENSG00000160767.22	ENST00000361361.7	3190	12	0	-5	0	5	multi-exon	FALSE	canonical	3	98	junction_10	14.4307981028181	2975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCACCAGTGAAATTTGTT	-16	True	NA	-11	True	AATAAA	-35	NA	155255483	155247199	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155247956_155248049_155248304_155248404_155248474_155250275_155250822_155251094_155251165_155251501_155251602_155251732_155251906_155253624_155253733_155253858_155253979_155254083_155254195_155254399_155254457_155254652
H1_mix_00004231	chr1	-	1535	8	FSM	ENSG00000116521.11	ENST00000355379.3	1537	8	0	2	0	-2	multi-exon	FALSE	canonical	3	120	junction_7	178.035080239593	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATCCCCGTTTCCTGAAT	2	False	NA	-5	True	AATAAA	-21	NA	155262430	155255982	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155256420_155256673_155256792_155257284_155257387_155257497_155257658_155258825_155258955_155260329_155260451_155260536_155260660_155262085
H1_mix_00004235	chr1	-	764	2	FSM	ENSG00000116521.11	ENST00000480219.1	752	2	0	-12	0	12	multi-exon	FALSE	canonical	3	526	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGCATGCCTGTAATCCC	103	False	NA	NA	False	AAAAAG	-10	NA	155262329	155261214	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155261735_155262085
H1_mix_00004238	chr1	-	2154	13	FSM	ENSG00000176444.19	ENST00000368361.9	2154	13	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_10	57.1328860348107	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGGAGTTGGAGGTTTG	22	False	155273526	-2	True	AATAAA	-25	NA	155273504	155262867	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155263401_155263949_155264041_155264220_155264301_155264467_155264551_155264644_155264775_155265859_155265955_155266728_155266896_155268009_155268127_155268292_155268360_155268707_155268796_155269487_155269717_155270807_155270978_155273200
H1_mix_00004239	chr1	-	2126	13	FSM	ENSG00000176444.19	ENST00000355560.4	2120	13	0	-6	0	0	multi-exon	FALSE	canonical	3	93	junction_10	95.5133789348673	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGGAGTTGGAGGTTTG	-4	True	NA	-2	True	AATAAA	-25	NA	155273482	155262867	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155263401_155263949_155264041_155264220_155264301_155264467_155264551_155264644_155264775_155265859_155265955_155266728_155266896_155268009_155268127_155268292_155268360_155268707_155268793_155269487_155269714_155270807_155270978_155273200
H1_mix_00004240	chr1	-	2051	12	NIC	ENSG00000176444.19	novel	2154	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_9	110.401595987985	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGACCCCCATCCCTGGA	22	False	155273526	-14	True	AATAAA	-13	NA	155273504	155262879	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_155263401_155263949_155264041_155264220_155264301_155264467_155264551_155264644_155264775_155265859_155265955_155266728_155266896_155268009_155268127_155268292_155268360_155269487_155269714_155270807_155270978_155273200
H1_mix_00004241	chr1	-	1985	9	ISM	ENSG00000143627.19	ENST00000392414.7	2479	11	5211	224	5166	-224	3prime_fragment	FALSE	canonical	3	11	junction_4	3.44374432848898	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGGTGGGATGGATGCT	5642	False	NA	NA	False	NA	NA	NA	155295790	155290062	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_155290679_155291755_155291938_155293176_155293344_155293437_155293591_155294234_155294386_155294481_155294753_155295115_155295303_155295436_155295569_155295664
H1_mix_00004244	chr1	-	412	1	FSM	ENSG00000223503.1	ENST00000427475.1	662	1	-35	285	-35	-285	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCAGGGGTCCTGACACT	19	False	NA	NA	False	NA	NA	NA	155591297	155590885	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155590900_155591300
H1_mix_00004245	chr1	-	2493	11	NNC	ENSG00000163374.20	novel	2654	11	NA	NA	177	10517	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	124.045797994128	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGGCACATAAATATGG	876	False	NA	NA	False	AAAAAG	-1	NA	155688117	155648925	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_155648956_155659453_155660914_155661306_155661424_155668626_155668718_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688070
H1_mix_00004246	chr1	-	2677	12	NNC	ENSG00000163374.20	novel	2723	11	NA	NA	0	10517	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	108.50456059273	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGGCACATAAATATGG	-27	True	NA	NA	False	AAAAAG	-1	NA	155688698	155648925	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_155648956_155659453_155660914_155661306_155661424_155668626_155668778_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688070_155688202_155688658
H1_mix_00004248	chr1	-	2527	10	FSM	ENSG00000163374.20	ENST00000347088.9	2524	10	0	-3	0	0	multi-exon	FALSE	canonical	3	21	junction_9	111.367260299725	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGCAATTTGTTCAGT	-27	True	NA	0	True	AATAAA	-32	NA	155688698	155659442	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155660914_155661306_155661424_155668626_155668778_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688658
H1_mix_00004249	chr1	-	2657	11	FSM	ENSG00000163374.20	ENST00000404643.5	2654	11	0	-3	0	0	multi-exon	FALSE	canonical	3	113	junction_3	83.3863897767495	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGCAATTTGTTCAGT	-3	True	NA	0	True	AATAAA	-32	NA	155688757	155659442	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155660914_155661306_155661424_155668626_155668718_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688070_155688202_155688658
H1_mix_00004250	chr1	-	3099	10	NIC	ENSG00000163374.20	novel	2723	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	229	junction_9	58.083804929272	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTCATTGATTTGTGCA	-3	True	NA	-11	True	AATAAA	-21	NA	155688757	155659453	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_155661424_155668626_155668778_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688070_155688202_155688658
H1_mix_00004251	chr1	-	2763	11	FSM	ENSG00000163374.20	ENST00000355499.9	2723	11	0	-40	0	29	multi-exon	FALSE	canonical	3	229	junction_10	59.3202326360914	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTCCAAGAACCTGGAC	-20	True	NA	29	True	NA	NA	NA	155688774	155659413	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155660914_155661306_155661424_155668626_155668778_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688070_155688202_155688658
H1_mix_00004254	chr1	-	7034	32	NIC	ENSG00000116580.20	novel	7745	32	NA	NA	0	-25	combination_of_known_junctions	FALSE	canonical	3	49	junction_8	35.2994916436734	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATCGAGAGTGGAGTTCA	-3	True	NA	NA	False	NA	NA	NA	155857204	155750356	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_155750734_155751766_155751870_155751959_155752588_155753203_155753415_155754374_155754489_155756957_155757078_155757179_155757324_155757890_155758035_155760443_155760642_155762189_155762375_155763311_155763565_155764999_155766710_155767424_155767542_155771066_155771218_155773065_155773211_155775001_155775174_155776394_155776482_155777621_155777821_155783985_155784090_155785333_155785375_155795049_155795152_155804948_155805142_155813633_155813805_155814329_155814450_155815804_155815901_155816211_155816263_155820605_155820657_155821473_155821549_155822285_155822477_155826836_155827029_155853275_155853807_155857146
H1_mix_00004255	chr1	-	813	4	FSM	ENSG00000116580.20	ENST00000460075.1	813	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	8.49836585598798	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAGTTGTGGAATCCAAT	8681	False	NA	NA	False	AAAACA	-17	NA	155757967	155754016	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155754489_155756957_155757078_155757179_155757324_155757890
H1_mix_00004256	chr1	-	5115	21	FSM	ENSG00000116580.20	ENST00000361040.9	5118	21	0	3	0	-3	multi-exon	FALSE	canonical	3	25	junction_20	43.7713090962562	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAGTAAATAACTGGGCA	-3	True	NA	NA	False	NA	NA	NA	155857204	155764429	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155766710_155767424_155767542_155771066_155771218_155773065_155773211_155775001_155775174_155776394_155776482_155777621_155777821_155783985_155784090_155785333_155785375_155795049_155795152_155804948_155805142_155813633_155813805_155814329_155814450_155815804_155815901_155816211_155816263_155820605_155820657_155821473_155821549_155822285_155822477_155826836_155827029_155853275_155853807_155857158
H1_mix_00004257	chr1	-	5097	20	FSM	ENSG00000116580.20	ENST00000471341.5	5097	20	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_19	42.497384635187	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATCACCTGACCATACT	-16	True	NA	NA	False	ATTAAA	-18	NA	155857217	155764783	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155766710_155767424_155767542_155771066_155771218_155773065_155773211_155775001_155775174_155776394_155776482_155777621_155777821_155783985_155784090_155785333_155785375_155795049_155795152_155804948_155805142_155813633_155813805_155814329_155814450_155815804_155816263_155820605_155820657_155821473_155821549_155822285_155822477_155826836_155827029_155853275_155853807_155857146
H1_mix_00004261	chr1	-	843	1	NIC	ENSG00000116580.20	novel	471	4	NA	NA	-12153	-5961	mono-exon	FALSE	NA	NA	NA	NA	NA	219	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTTTTTGTTGTTTTA	966	False	NA	NA	False	AATAAA	-26	NA	155833673	155832830	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_155832800_155833700
H1_mix_00004263	chr1	-	919	5	FSM	ENSG00000143622.11	ENST00000539040.5	919	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	95.1482396053653	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTCACATTAGAATTTG	-10	True	NA	-33	True	NA	NA	NA	155911402	155900182	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155900619_155904310_155904503_155904730_155904805_155910449_155910507_155911242
H1_mix_00004265	chr1	-	4498	13	NIC	ENSG00000132680.11	novel	4499	13	NA	NA	-13	0	intron_retention	FALSE	canonical	3	25	junction_2	53.1363549956357	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGGTTTCTCTGTTT	8500	False	NA	-8	True	AATAAA	-14	NA	155934426	155913044	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_155915965_155916624_155916710_155917498_155917673_155921374_155921629_155921860_155921919_155923626_155923688_155925631_155925844_155926675_155926840_155927103_155927157_155929295_155929376_155929711_155929841_155933632_155933850_155934335
H1_mix_00004267	chr1	-	301	1	FSM	ENSG00000207475.1	ENST00000384744.1	137	1	11	-175	11	175	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCACGCGATTCTCCTGCC	8556	False	NA	NA	False	NA	NA	NA	155920034	155919733	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155919700_155920000
H1_mix_00004270	chr1	-	1894	5	FSM	ENSG00000116584.21	ENST00000470541.6	1877	5	0	-17	0	12	multi-exon	FALSE	canonical	3	33	junction_1	30.1869176962472	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAATGTCTGCCAATTCTG	NA	False	NA	9	True	ATTAAA	-30	NA	155951748	155946838	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155948016_155950268_155950483_155950828_155951273_155951482_155951534_155951740
H1_mix_00004271	chr1	-	4184	22	FSM	ENSG00000116584.21	ENST00000361247.9	4169	22	0	-15	0	12	multi-exon	FALSE	canonical	3	45	junction_16	16.1802488706058	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAATGTCTGCCAATTCTG	-6	True	NA	9	True	ATTAAA	-30	NA	155978547	155946838	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155948016_155950298_155950483_155950828_155951273_155951482_155951534_155951740_155951777_155951918_155951987_155952115_155952236_155952627_155952829_155954901_155954970_155957712_155957883_155958319_155958397_155961660_155961910_155962104_155962223_155962592_155962719_155962932_155963184_155964987_155965132_155965302_155965413_155965630_155965761_155966415_155966480_155966819_155966888_155969155_155969301_155978364
H1_mix_00004272	chr1	-	4223	22	NIC	ENSG00000116584.21	novel	4169	22	NA	NA	-22	-1	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	18.2716960155166	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTACTGTCTTCCATAATG	5975	False	NA	-4	True	ATTAAA	-17	NA	155978569	155946851	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_155948016_155950268_155950483_155950828_155951273_155951482_155951534_155951740_155951777_155951918_155951987_155952115_155952236_155952627_155952829_155954901_155954970_155957712_155957883_155958319_155958397_155961660_155961910_155962104_155962223_155962592_155962719_155962932_155963184_155964987_155965132_155965302_155965413_155965630_155965761_155966415_155966480_155966819_155966888_155969155_155969301_155978364
H1_mix_00004273	chr1	-	4194	23	NIC	ENSG00000116584.21	novel	4438	26	NA	NA	5026	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_21	27.7356172242465	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGTCTTCCATAATGTC	6736	False	NA	-2	True	ATTAAA	-19	NA	155984473	155946849	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_155948016_155950268_155950483_155950828_155951273_155951482_155951534_155951740_155951777_155951918_155951987_155952115_155952236_155952627_155952829_155954901_155954970_155957712_155957883_155958319_155958397_155961660_155961910_155962104_155962223_155962592_155962719_155962932_155963184_155964987_155965132_155965302_155965413_155965630_155965761_155966415_155966480_155966819_155966888_155969155_155969301_155983106_155983201_155984393
H1_mix_00004274	chr1	-	4118	22	FSM	ENSG00000116584.21	ENST00000313667.8	2958	22	-74	-1086	0	0	multi-exon	FALSE	canonical	3	31	junction_16	17.7054509458889	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAAGGTACTGTCTTCCAT	-1	True	NA	-8	True	ATTAAA	-13	NA	155978501	155946855	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155948016_155950298_155950483_155950828_155951273_155951482_155951534_155951740_155951777_155951918_155951987_155952115_155952236_155952627_155952829_155954901_155954970_155957712_155957883_155958319_155958397_155961660_155961910_155962104_155962223_155962592_155962719_155962932_155963184_155964987_155965129_155965302_155965413_155965630_155965761_155966415_155966480_155966819_155966888_155969155_155969301_155978364
H1_mix_00004276	chr1	-	1113	6	FSM	ENSG00000163479.14	ENST00000295702.9	1108	6	0	-5	0	5	multi-exon	FALSE	canonical	3	1423	junction_5	175.193607189304	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTTCTTAGCCCCCGGG	15	False	156020966	-10	True	AATAAA	-23	NA	156020951	156009042	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156009651_156011809_156011888_156014960_156015070_156018269_156018369_156020012_156020168_156020887
H1_mix_00004278	chr1	-	825	4	FSM	ENSG00000163479.14	ENST00000496742.5	825	4	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_2	792.114890656652	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGTTAGAGAAGTGCTTA	-3	True	NA	-72	True	AATGAA	-37	NA	156020933	156009104	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156009651_156011809_156011888_156020012_156020168_156020887
H1_mix_00004279	chr1	-	1064	5	FSM	ENSG00000163479.14	ENST00000480176.5	1040	5	0	-24	0	0	multi-exon	FALSE	canonical	3	101	junction_2	730.57699799542	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGTTAGAGAAGTGCTTA	-5	True	NA	-72	True	AATGAA	-37	NA	156020935	156009104	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156009651_156011809_156011888_156018131_156018369_156020012_156020168_156020887
H1_mix_00004282	chr1	-	3582	11	FSM	ENSG00000160803.8	ENST00000368309.4	3582	11	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_3	28.4281550579703	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTTGGCGTTTGTTTTT	3	True	NA	NA	False	AATAAA	-23	NA	156053798	156035298	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156037131_156041484_156041672_156041871_156041988_156042152_156042237_156042773_156042914_156043997_156044224_156048500_156048660_156050290_156050554_156051109_156051328_156051705_156051858_156053593
H1_mix_00004284	chr1	-	6591	2	FSM	ENSG00000254726.3	ENST00000532414.3	6591	2	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCTGTCTTCGTTCTCTG	13	True	NA	-9	True	ATTAAA	-45	NA	156082465	156072012	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156077683_156081544
H1_mix_00004287	chr1	-	1778	3	ISM	ENSG00000160781.17	ENST00000649372.1	2117	7	2344	-1	2306	0	intron_retention	FALSE	canonical	3	17	junction_1	12	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTCTAGAACTGAAGAAGG	7739	False	NA	-13	True	AATAAA	-22	NA	156245708	156243414	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_156244404_156244689_156244912_156245141
H1_mix_00004290	chr1	-	550	3	FSM	ENSG00000198715.13	ENST00000497831.1	543	3	0	-7	0	0	multi-exon	FALSE	canonical	2	6	junction_1	9	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCAGTGTGTTCCATTGT	4120	False	NA	-5	True	TATAAA	-24	NA	156291550	156290088	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156290361_156290976_156291107_156291402
H1_mix_00004293	chr1	-	1370	5	FSM	ENSG00000198715.13	ENST00000612353.4	1365	5	10	-15	0	15	multi-exon	FALSE	canonical	3	37	junction_1	151.763590824677	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGAGTGTTGTTGGGCTGG	-9	True	NA	11	True	AATAGA	-36	NA	156295679	156292671	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156293210_156294017_156294237_156294364_156294566_156294758_156295017_156295525
H1_mix_00004294	chr1	-	684	3	FSM	ENSG00000198715.13	ENST00000481050.1	684	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	191	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGGGCTCCAGTCTCTTG	1594	False	NA	-12	True	AATAGA	-13	NA	156294076	156292694	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156293210_156293319_156293430_156294017
H1_mix_00004295	chr1	-	1002	2	FSM	ENSG00000198715.13	ENST00000497955.1	1002	2	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAATCTGACGTTCGGG	1157	False	NA	NA	False	NA	NA	NA	156294513	156293383	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156294237_156294364
H1_mix_00004296	chr1	-	1977	14	FSM	ENSG00000163468.15	ENST00000295688.8	1977	14	0	0	0	0	multi-exon	FALSE	canonical	3	3026	junction_10	209.514400516214	1419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTTGTTATGTGTTTTT	-24	True	NA	-21	True	ATTAAA	-15	NA	156338292	156308967	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156309304_156310557_156310690_156310949_156311196_156312040_156312222_156317165_156317248_156317414_156317548_156318867_156319018_156320838_156321026_156324971_156325090_156333546_156333644_156334712_156334776_156334867_156334919_156335826_156335889_156338153
H1_mix_00004298	chr1	-	827	2	FSM	ENSG00000163468.15	ENST00000489870.1	827	2	0	0	0	0	multi-exon	FALSE	canonical	3	3543	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATCACTTGGGCCCAGGG	5	True	NA	NA	False	NA	NA	NA	156338206	156335114	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156335889_156338153
H1_mix_00004301	chr1	-	478	3	FSM	ENSG00000125462.19	ENST00000400991.6	473	3	0	-5	0	3	multi-exon	FALSE	canonical	3	20	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTGGATATACCTGGACA	3	True	NA	5	True	AATAAA	-32	NA	156429423	156404246	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156404602_156426797_156426873_156429375
H1_mix_00004302	chr1	-	734	4	FSM	ENSG00000125462.19	ENST00000497824.5	725	4	0	-9	0	3	multi-exon	FALSE	canonical	3	6	junction_2	7.1336448530109	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTGGATATACCTGGACA	7156	False	NA	5	True	AATAAA	-32	NA	156429579	156404246	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156404602_156414653_156414754_156426797_156426873_156429375
H1_mix_00004303	chr1	-	777	4	FSM	ENSG00000125462.19	ENST00000667036.1	781	4	0	4	0	-4	multi-exon	FALSE	canonical	0	0	junction_2	3.55902608401044	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTTCTTTTGAGTTACA	711	False	NA	NA	False	ATTAAA	-16	NA	156456640	156453010	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156453253_156454642_156454796_156455627_156455722_156456352
H1_mix_00004304	chr1	-	726	3	FSM	ENSG00000125462.19	ENST00000452465.2	857	3	10	121	10	-4	multi-exon	FALSE	canonical	2	3	junction_1	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTTCTTTTGAGTTACA	609	False	NA	NA	False	ATTAAA	-16	NA	156456742	156453010	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156453253_156455627_156455722_156456352
H1_mix_00004305	chr1	-	6236	10	NIC	ENSG00000116604.19	novel	5912	12	NA	NA	-11	-6	intron_retention	FALSE	canonical	3	101	junction_8	9.3465514865836	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATACTTCGGCGTGGGTT	17	True	NA	-11	True	ATTAAA	-20	NA	156500790	156463732	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_156468300_156468779_156469021_156475107_156475238_156477011_156477203_156479289_156479347_156479585_156479797_156480833_156480972_156482436_156482641_156483238_156483431_156500485
H1_mix_00004306	chr1	-	3421	11	NIC	ENSG00000116604.19	novel	5912	12	NA	NA	-35	-26	combination_of_known_junctions	FALSE	canonical	3	73	junction_1	15.0279739153354	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAACGGCCCGTACTGTAC	-7	True	NA	-27	True	NA	NA	NA	156500814	156466235	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_156467657_156467992_156468300_156468779_156469021_156475107_156475238_156477011_156477203_156479289_156479347_156479585_156479797_156480833_156480972_156482436_156482641_156483238_156483431_156500485
H1_mix_00004307	chr1	-	3378	11	NIC	ENSG00000116604.19	novel	3194	11	NA	NA	1	-17	combination_of_known_splicesites	FALSE	canonical	3	10	junction_10	33.5225297374766	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTACTGTACAGACGAGAT	33	True	NA	-18	True	NA	NA	NA	156500774	156466226	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_156467657_156467992_156468300_156468779_156469021_156475107_156475238_156477011_156477203_156479289_156479347_156479585_156479797_156480833_156480972_156482436_156482641_156483238_156483419_156500485
H1_mix_00004308	chr1	-	6015	38	FSM	ENSG00000183856.11	ENST00000361170.7	6013	38	0	-2	0	2	multi-exon	TRUE	canonical	3	25	junction_19	6.87677196767481	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTGTTAACCCTTATTT	-11	True	NA	-2	True	AATAAA	-20	NA	156572565	156525402	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156526600_156527951_156528061_156528508_156528611_156528915_156529083_156530104_156530318_156531159_156531248_156532979_156533107_156533772_156533876_156534008_156534142_156534500_156534734_156535162_156535248_156537180_156537322_156538808_156539034_156539373_156539538_156539837_156539991_156540707_156540917_156543980_156544051_156544151_156544224_156544388_156544473_156548072_156548244_156548347_156548488_156548580_156548749_156550260_156550352_156551704_156551869_156551973_156552096_156554234_156554393_156556532_156556694_156560933_156561022_156561837_156562002_156562586_156562666_156563133_156563313_156563552_156563667_156563756_156563825_156564614_156564692_156566026_156566105_156566389_156566547_156569375_156569464_156572492
H1_mix_00004309	chr1	-	659	2	FSM	ENSG00000183856.11	ENST00000476565.1	544	2	0	-115	0	115	multi-exon	FALSE	canonical	3	35	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTATACATTGTGCAATG	2230	False	NA	NA	False	NA	NA	NA	156538861	156536715	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156537322_156538808
H1_mix_00004310	chr1	-	2154	8	FSM	ENSG00000160818.17	ENST00000368232.9	2154	8	0	0	0	0	multi-exon	TRUE	canonical	3	402	junction_2	46.244249504613	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTAACAGTCCAT	-4	True	NA	-10	True	AATGAA	-31	NA	156601479	156594300	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156595850_156596080_156596132_156596386_156596479_156598034_156598122_156598226_156598320_156598420_156598495_156598967_156599105_156601408
H1_mix_00004313	chr1	-	585	7	NNC	ENSG00000160818.17	novel	2154	8	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	1	26	junction_4	166.431166952988	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTAAGTAGTGGTCAGCT	9	True	NA	NA	False	NA	NA	NA	156601466	156596083	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_156596132_156596386_156596479_156598034_156598122_156598226_156598316_156598420_156598495_156598967_156599105_156601408
H1_mix_00004317	chr1	-	974	4	FSM	ENSG00000143320.9	ENST00000368222.8	974	4	0	0	0	0	multi-exon	FALSE	canonical	3	1675	junction_3	191.362367135118	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCTCTGGCTCATTGGG	0	True	NA	34	True	AATAAA	-2	NA	156705583	156699605	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156700077_156700541_156700659_156700873_156701053_156705376
H1_mix_00004318	chr1	-	1045	5	FSM	ENSG00000143320.9	ENST00000621784.4	1033	5	0	-12	0	0	multi-exon	TRUE	canonical	3	69	junction_4	824.539265286984	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCTCTGGCTCATTGGG	-19	True	NA	34	True	AATAAA	-2	NA	156705816	156699605	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156700077_156700541_156700659_156700873_156701053_156705376_156705547_156705708
H1_mix_00004320	chr1	-	265	2	FSM	ENSG00000223356.1	ENST00000428641.1	433	2	128	40	128	-40	multi-exon	FALSE	canonical	0	0	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACCATAAGTGCCCTCAAG	NA	False	NA	NA	False	NA	NA	NA	156713046	156712251	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156712348_156712877
H1_mix_00004321	chr1	-	3440	3	FSM	ENSG00000143319.17	ENST00000313146.10	3303	3	0	-137	0	137	multi-exon	FALSE	canonical	3	259	junction_1	5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGCGTAACCCACGTGA	-5	True	NA	92	True	NA	NA	NA	156728435	156721753	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156723463_156724147_156724349_156726905
H1_mix_00004323	chr1	-	2989	4	FSM	ENSG00000143319.17	ENST00000368219.2	2985	4	0	-4	0	0	multi-exon	FALSE	canonical	3	38	junction_3	106.615612782035	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTACAGTTTCTTCTTT	-29	True	NA	-25	True	GATAAA	-21	NA	156728766	156721890	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156723463_156724147_156724349_156726905_156727770_156728414
H1_mix_00004324	chr1	-	884	6	FSM	ENSG00000143314.12	ENST00000361531.6	883	6	0	-1	0	1	multi-exon	FALSE	canonical	2	139	junction_5	74.666190474672	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTGTACAGCTGCTGTG	6	True	NA	-10	True	AATAAA	-18	NA	156741088	156737301	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156737535_156737645_156737777_156738030_156738135_156738342_156738439_156738521_156738765_156741011
H1_mix_00004325	chr1	-	886	6	FSM	ENSG00000143314.12	ENST00000368211.8	883	6	0	-3	0	1	multi-exon	FALSE	canonical	2	123	junction_5	79.5547610140336	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTGTACAGCTGCTGTG	2	True	NA	-10	True	AATAAA	-18	NA	156741131	156737301	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156737535_156737645_156737777_156738030_156738135_156738342_156738439_156738521_156738765_156741052
H1_mix_00004326	chr1	-	2503	5	NIC	ENSG00000143321.19	novel	2073	7	NA	NA	1	0	intron_retention	FALSE	canonical	3	1541	junction_3	73.3429444459384	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGGATTCTGACTGATT	4	True	NA	-7	True	AATAAA	-15	NA	156751674	156742109	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_156743879_156744162_156744349_156745007_156745147_156745296_156745374_156751342
H1_mix_00004327	chr1	-	2406	6	FSM	ENSG00000143321.19	ENST00000357325.10	2309	6	-98	1	-98	0	multi-exon	FALSE	canonical	3	1541	junction_4	65.6731299695697	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGGATTCTGACTGATT	695	False	NA	-7	True	AATAAA	-15	NA	156751773	156742109	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156743456_156743651_156743879_156744162_156744349_156745007_156745147_156745296_156745374_156751342
H1_mix_00004328	chr1	-	2171	6	FSM	ENSG00000143321.19	ENST00000368209.9	2171	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	649.364489327835	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGGATTCTGACTGATT	-1	True	NA	-7	True	AATAAA	-15	NA	156752233	156742109	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156743456_156743651_156743879_156744162_156744349_156745007_156745147_156745296_156745374_156752037
H1_mix_00004330	chr1	-	960	6	FSM	ENSG00000143321.19	ENST00000368206.5	960	6	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_5	635.434213746789	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGCTCTCCTCTTCTAC	-20	True	NA	NA	False	NA	NA	NA	156752448	156743344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156743456_156743651_156743879_156744162_156744349_156745007_156745147_156745296_156745374_156752228
H1_mix_00004331	chr1	-	2825	4	FSM	ENSG00000143321.19	ENST00000495212.1	744	4	-349	-1732	-170	0	multi-exon	FALSE	canonical	3	1616	junction_3	46.9254728266003	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGATTCTGACTGATTC	-9	True	NA	-6	True	AATAAA	-16	NA	156751845	156742108	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156743879_156744162_156744349_156745007_156745374_156751342
H1_mix_00004332	chr1	-	1198	5	ISM	ENSG00000027869.12	ENST00000368198.7	1599	9	2735	-9	12	9	3prime_fragment	FALSE	canonical	3	24	junction_3	8.61321658847611	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGGCTCCTTCTGTTTCT	2750	False	NA	1	True	AATAAA	-39	NA	156814099	156806233	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_156806574_156807174_156807346_156809202_156809491_156809660_156809808_156813847
H1_mix_00004334	chr1	-	699	3	FSM	ENSG00000027869.12	ENST00000468744.5	699	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	10	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATGGGTATGCAGGGAA	2	True	NA	NA	False	NA	NA	NA	156814111	156809202	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156809491_156809660_156809808_156813847
H1_mix_00004336	chr1	-	7325	40	NIC	ENSG00000132694.19	novel	7261	41	NA	NA	-160	0	combination_of_known_splicesites	FALSE	canonical	3	62	junction_32	31.0457023507444	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTGGTGTGTGTGTTTCT	-23	True	NA	-5	True	AAGAAA	-17	NA	157045902	156934839	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_156936059_156936815_156937006_156937248_156937497_156939547_156939911_156940206_156940426_156941371_156941434_156941863_156941990_156942689_156942781_156943934_156944103_156944357_156944434_156945018_156945198_156946044_156946163_156946661_156946788_156946935_156947016_156947303_156947451_156947768_156947957_156948180_156948229_156948318_156948499_156951572_156951700_156954891_156954922_156955702_156955800_156956419_156956565_156957791_156957816_156958741_156958865_156959045_156959143_156960417_156960461_156961676_156961776_156963202_156963305_156963519_156963595_156967986_156968125_156969281_156969359_156969997_156970044_156971696_156971817_156976982_156977055_156978203_156978383_156979228_156979287_156980436_156980487_156984338_156984438_156986081_156986174_157044298
H1_mix_00004337	chr1	-	7261	41	FSM	ENSG00000132694.19	ENST00000368194.8	7261	41	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_3	44.8438331880761	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTGGTGTGTGTGTTTCT	7	True	NA	-5	True	AAGAAA	-17	NA	157045742	156934839	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156936059_156936815_156937006_156937248_156937497_156938417_156938514_156939547_156939911_156940206_156940426_156941371_156941434_156941863_156941990_156942689_156942781_156943934_156944103_156944357_156944434_156945018_156945198_156946044_156946163_156946661_156946788_156946935_156947016_156947303_156947451_156947768_156947957_156948180_156948229_156948318_156948499_156951572_156951700_156954891_156954922_156955702_156955800_156956419_156956565_156957791_156957816_156958741_156958865_156959045_156959143_156960417_156960461_156961676_156961776_156963202_156963305_156963519_156963595_156967986_156968125_156969281_156969359_156969997_156970044_156971696_156971817_156976982_156977055_156978203_156978383_156979228_156979287_156980436_156980487_156984338_156984438_156986081_156986174_157044298
H1_mix_00004338	chr1	-	7205	39	NIC	ENSG00000132694.19	novel	7261	41	NA	NA	-160	0	combination_of_known_splicesites	FALSE	canonical	3	72	junction_32	28.0417180311497	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTGGTGTGTGTGTTTCT	-23	True	NA	-5	True	AAGAAA	-17	NA	157045902	156934839	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_156936059_156936815_156937006_156937248_156937497_156939547_156939911_156940206_156940426_156941371_156941434_156941863_156941990_156942689_156942781_156943934_156944103_156944357_156944434_156945018_156945198_156946044_156946163_156946661_156946788_156946935_156947016_156947303_156947451_156947768_156947957_156948180_156948229_156948318_156948499_156951572_156951700_156954891_156954922_156955702_156955800_156956419_156956565_156957791_156957816_156958741_156958865_156959045_156959143_156960417_156960461_156961676_156961776_156963202_156963305_156963519_156963595_156967986_156968125_156969281_156969359_156969997_156970044_156976982_156977055_156978203_156978383_156979228_156979287_156980436_156980487_156984338_156984438_156986081_156986174_157044298
H1_mix_00004342	chr1	-	3056	1	Genic_Genomic	ENSG00000117036.12	novel	NA	NA	NA	NA	14093	4	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGAGTTGGTTTTGTT	510	False	NA	-1	True	AATAAA	-22	NA	157124242	157121186	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_-_157121200_157124200
H1_mix_00004343	chr1	-	1539	4	FSM	ENSG00000117036.12	ENST00000326786.4	1539	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2.05480466765633	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTTGTGTACTGTACAG	504	False	NA	NA	False	AATAAA	-23	NA	157138474	157133144	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_157134228_157135470_157135709_157136306_157136366_157138315
H1_mix_00004344	chr1	-	4436	7	FSM	ENSG00000143297.19	ENST00000461387.5	4508	7	68	4	68	-4	multi-exon	FALSE	canonical	1	1	junction_6	0.942809041582063	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATGTGTGCATGTGTAT	NA	False	NA	NA	False	AATAAA	-10	NA	157522726	157513381	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_157515765_157515841_157515874_157518428_157518498_157518699_157518783_157519742_157519771_157520430_157520562_157521016
H1_mix_00004345	chr1	-	1906	1	FSM	ENSG00000227295.2	ENST00000413990.1	1906	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTAGAACTCTGCTTGGAC	NA	False	NA	NA	False	NA	NA	NA	158177755	158175849	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_158175800_158177800
H1_mix_00004347	chr1	-	1375	5	FSM	ENSG00000158710.15	ENST00000368097.9	1375	5	0	0	0	0	multi-exon	FALSE	canonical	3	631	junction_4	79.192802703276	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGACTCTGGCTGTGTCTGG	-2	True	NA	-9	True	AATAAA	-19	NA	159925507	159918110	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_159918942_159919273_159919377_159919660_159919836_159920329_159920538_159925449
H1_mix_00004348	chr1	-	4012	21	FSM	ENSG00000085552.18	ENST00000361509.7	3996	21	0	-16	0	16	multi-exon	TRUE	canonical	3	27	junction_13	27.7972570589258	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTGAGAGAGTGCCAGG	8637	False	NA	13	True	AATAAA	-33	NA	159945596	159927022	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_159927527_159927759_159927888_159928157_159929019_159929350_159929394_159929637_159929815_159929890_159929976_159930188_159930440_159930691_159930868_159931137_159931262_159931452_159931604_159931811_159931929_159932511_159932653_159934189_159934285_159934424_159934571_159934680_159934823_159936398_159936517_159936753_159936909_159937685_159937839_159942962_159943152_159943396_159943629_159945572
H1_mix_00004349	chr1	-	4457	21	FSM	ENSG00000085552.18	ENST00000368094.6	4059	21	-396	-2	-396	0	multi-exon	FALSE	canonical	3	87	junction_13	20.1292697334007	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGTGTTATCTGTCT	0	True	NA	-3	True	AATAAA	-17	NA	159946009	159927038	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_159927527_159927759_159927888_159928157_159929019_159929350_159929394_159929637_159929815_159929890_159929976_159930188_159930440_159930691_159930868_159931137_159931262_159931452_159931604_159931811_159931929_159932511_159932653_159934189_159934333_159934424_159934571_159934680_159934823_159936398_159936517_159936753_159936909_159937685_159937839_159942962_159943152_159943396_159943629_159945572
H1_mix_00004351	chr1	-	7085	1	FSM	ENSG00000143315.8	ENST00000368090.5	7038	1	-74	27	-74	-27	mono-exon	FALSE	NA	NA	NA	NA	NA	290	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATAATAAATACTGATATG	9544	False	NA	NA	False	CATAAA	-33	NA	160032064	160024979	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_160025000_160032100
H1_mix_00004354	chr1	-	2270	7	FSM	ENSG00000162729.14	ENST00000314485.12	2270	7	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_5	55.6856255140309	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGCTTGGCTGTGTCTTC	-8	True	NA	NA	False	AATAAA	-16	NA	160098619	160091342	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_160091609_160091807_160091939_160092281_160092696_160092923_160093332_160093709_160094172_160094868_160095247_160098408
H1_mix_00004356	chr1	-	5097	4	NNC	ENSG00000132716.19	novel	3867	14	NA	NA	-875	74869	intron_retention	FALSE	non_canonical	0	0	junction_1	414.887401056667	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGTGAAAGGGAGGAGAAG	7	False	NA	NA	False	AAAAAG	-1	NA	160221809	160140845	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_160140876_160215719_160217709_160218323_160218441_160218848
H1_mix_00004359	chr1	-	3972	15	NNC	ENSG00000132716.19	novel	4106	14	NA	NA	0	74869	intron_retention	FALSE	non_canonical	0	0	junction_1	239.565263145813	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGTGAAAGGGAGGAGAAG	16	True	NA	NA	False	AAAAAG	-1	NA	160262451	160140845	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_160140876_160215719_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160261284_160261359_160262275
H1_mix_00004362	chr1	-	4010	13	NIC	ENSG00000132716.19	novel	4106	14	NA	NA	2	0	intron_retention	FALSE	canonical	3	108	junction_12	198.661772870374	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCTCTGTGTGGTATG	118	False	NA	-9	True	AGTAAA	-17	NA	160262434	160215719	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160262116
H1_mix_00004363	chr1	-	3984	15	NIC	ENSG00000132716.19	novel	4106	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	60	junction_1	227.909051409297	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCTCTGTGTGGTATG	117	False	NA	-9	True	AGTAAA	-17	NA	160262435	160215719	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_160217477_160217577_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160261284_160261359_160262116
H1_mix_00004364	chr1	-	3872	13	NIC	ENSG00000132716.19	novel	3972	14	NA	NA	-3	1	intron_retention	FALSE	canonical	3	41	junction_12	210.126730940058	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTCTGTGTGGTATGT	13	True	NA	-8	True	AGTAAA	-18	NA	160262454	160215718	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160262275
H1_mix_00004365	chr1	-	4155	14	FSM	ENSG00000132716.19	ENST00000368073.7	4106	14	0	-49	0	49	multi-exon	FALSE	canonical	3	82	junction_13	209.176039222028	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACTAATGTAGGTACCTAG	16	True	NA	45	True	NA	NA	NA	160262451	160215665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160261284_160261359_160262116
H1_mix_00004366	chr1	-	4021	14	FSM	ENSG00000132716.19	ENST00000326837.6	3972	14	0	-49	0	49	multi-exon	FALSE	canonical	3	46	junction_13	214.504492994419	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACTAATGTAGGTACCTAG	-9	True	NA	45	True	NA	NA	NA	160262476	160215665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160261284_160261359_160262275
H1_mix_00004367	chr1	-	3868	14	FSM	ENSG00000132716.19	ENST00000368074.6	3867	14	0	-1	0	1	multi-exon	FALSE	canonical	3	50	junction_13	213.897752491021	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTCTGTGTGGTATGT	3	True	NA	-8	True	AGTAAA	-18	NA	160262549	160215718	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160261284_160261359_160262448
H1_mix_00004371	chr1	-	1607	4	FSM	ENSG00000132716.19	ENST00000610139.5	1607	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_3	144.962064002966	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTATACTGTTGTTATTCT	127	False	NA	40	True	AATAAA	-17	NA	160262425	160239221	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_160240371_160243959_160244035_160261284_160261359_160262116
H1_mix_00004375	chr1	-	711	1	FSM	ENSG00000224261.2	ENST00000453374.2	886	1	-18	193	-18	-193	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTCCAGCTCCTGAGTT	NA	False	NA	NA	False	NA	NA	NA	160267243	160266532	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_160266500_160267200
H1_mix_00004376	chr1	-	4070	8	FSM	ENSG00000162735.19	ENST00000368072.10	3653	8	0	-417	0	417	multi-exon	FALSE	canonical	3	652	junction_2	49.767623275887	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAAGCAAGGTGAGTAAA	5	True	NA	NA	False	NA	NA	NA	160285133	160276389	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_160279635_160279800_160279846_160280069_160280247_160282038_160282201_160282416_160282503_160282943_160283110_160283529_160283640_160285054
H1_mix_00004377	chr1	-	3923	7	FSM	ENSG00000162735.19	ENST00000472750.5	3504	7	58	-477	0	417	multi-exon	FALSE	canonical	3	98	junction_6	228.952445329204	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAAGCAAGGTGAGTAAA	6869	False	NA	NA	False	NA	NA	NA	160285096	160276389	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_160279635_160279800_160279846_160280069_160280247_160282038_160282201_160282416_160282503_160282943_160283110_160285054
H1_mix_00004380	chr1	-	4664	33	FSM	ENSG00000122218.16	ENST00000368069.7	4664	33	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_17	161.106619272572	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCCATTTATTTCTTGG	10	True	NA	-12	True	AATAAA	-21	NA	160343248	160289272	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_160290217_160290491_160290687_160291334_160291497_160291818_160291930_160292011_160292199_160292483_160292621_160293165_160293235_160293385_160293464_160294483_160294594_160294767_160294858_160295735_160295860_160296060_160296150_160297342_160297439_160297555_160297746_160298844_160298992_160299101_160299265_160305432_160305599_160305687_160305774_160306353_160306494_160307162_160307246_160309100_160309177_160310191_160310259_160311867_160312019_160313084_160313168_160313989_160314126_160323430_160323531_160325542_160325653_160332447_160332558_160333602_160333680_160335241_160335323_160339908_160339983_160340180_160340295_160343130
H1_mix_00004381	chr1	-	616	5	FSM	ENSG00000122218.16	ENST00000541366.1	616	5	0	0	0	0	multi-exon	FALSE	canonical	3	823	junction_1	89.7621858022631	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTGCAAAATAATAAATG	-1	True	NA	-40	True	NA	NA	NA	160343259	160333461	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_160333680_160335241_160335323_160339908_160339983_160340180_160340295_160343130
H1_mix_00004383	chr1	-	1791	8	NNC	ENSG00000158764.7	novel	1161	8	NA	NA	-58	575	intron_retention	FALSE	canonical	3	15	junction_6	31.7387293188544	38	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAATTTCAAGTCTCATCT	NA	False	NA	NA	False	AATAAA	-20	NA	160954867	160944449	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_160945293_160947928_160948033_160950045_160950167_160950552_160950712_160951042_160951291_160952619_160952731_160954386_160954451_160954726
H1_mix_00004384	chr1	-	1639	5	ISM	ENSG00000158764.7	ENST00000368029.4	1161	8	3359	-579	24	579	3prime_fragment	FALSE	canonical	3	86	junction_4	6.22494979899437	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCAAGTCTCATCTGTCC	1	True	NA	NA	False	AATAAA	-24	NA	160951450	160944445	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_160945293_160947928_160948033_160950045_160950167_160950552_160950712_160951042
H1_mix_00004386	chr1	-	1128	7	NIC	ENSG00000158764.7	novel	1161	8	NA	NA	-31	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_6	37.5721528085185	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTATGTTTCTTTGAATTC	-1	True	NA	-5	True	ACTAAA	-17	NA	160954840	160945024	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_160945293_160947928_160948033_160950045_160950167_160950552_160950712_160951042_160951291_160952619_160952734_160954726
H1_mix_00004388	chr1	-	4637	10	FSM	ENSG00000158769.18	ENST00000368026.11	4639	10	0	2	0	-2	multi-exon	FALSE	canonical	3	1121	junction_3	109.914557163932	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTTTCCAGCTTATTAC	-7	True	NA	-9	True	ATTAAA	-16	NA	161021152	160995212	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_160998907_160999042_160999092_160999395_160999409_160999639_160999748_160999875_160999979_161000145_161000349_161000630_161000778_161001019_161001128_161001284_161001354_161021009
H1_mix_00004389	chr1	-	577	4	FSM	ENSG00000158769.18	ENST00000472573.5	577	4	0	0	0	0	multi-exon	FALSE	canonical	3	1349	junction_1	34.2928563989645	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGACTTCAAATGCTGT	NA	False	NA	NA	False	AATACA	-30	NA	161001177	160999909	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_160999979_161000145_161000349_161000630_161000778_161001019
H1_mix_00004393	chr1	-	626	3	FSM	ENSG00000215845.11	ENST00000318289.14	626	3	0	0	0	0	multi-exon	FALSE	canonical	3	897	junction_2	89	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGGAAGCACTTAATGT	18	True	NA	-15	True	AATAAA	-16	NA	161038937	161037630	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161038076_161038550_161038674_161038879
H1_mix_00004394	chr1	-	574	4	FSM	ENSG00000215845.11	ENST00000368023.7	574	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	579.921259022867	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGGAAGCACTTAATGT	5	True	NA	-15	True	AATAAA	-16	NA	161038950	161037630	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161037827_161037912_161038076_161038550_161038695_161038879
H1_mix_00004395	chr1	-	567	4	FSM	ENSG00000215845.11	ENST00000423014.3	567	4	0	0	0	0	multi-exon	FALSE	canonical	3	897	junction_3	212.675548403875	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGGAAGCACTTAATGT	-9	True	NA	-15	True	AATAAA	-16	NA	161038964	161037630	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161037827_161037912_161038076_161038550_161038674_161038879
H1_mix_00004396	chr1	-	457	3	FSM	ENSG00000215845.11	ENST00000368024.5	457	3	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_2	500	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGGAAGCACTTAATGT	-22	True	NA	-15	True	AATAAA	-16	NA	161038977	161037630	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161037827_161037912_161038076_161038879
H1_mix_00004400	chr1	-	598	4	FSM	ENSG00000143256.5	ENST00000368010.4	598	4	0	0	0	0	multi-exon	FALSE	canonical	3	1132	junction_1	137.463530517087	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAGCTGTAGCCTGAAGT	4	True	NA	-6	True	ATTAAA	-15	NA	161118037	161100560	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161100860_161102047_161102172_161102286_161102376_161117951
H1_mix_00004401	chr1	-	2303	6	FSM	ENSG00000158796.17	ENST00000458050.6	2300	6	0	-3	0	0	multi-exon	FALSE	canonical	3	32	junction_5	130.202304127078	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTTCTGAAACTGCAGT	314	False	NA	-10	True	AATAAA	-20	NA	161132466	161120973	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161122524_161123074_161123222_161123838_161123947_161124137_161124527_161130814_161130848_161132390
H1_mix_00004402	chr1	-	2344	6	FSM	ENSG00000158796.17	ENST00000368006.8	2344	6	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_5	48.5122664900332	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTTCTGAAACTGCAGT	-9	True	NA	-10	True	AATAAA	-20	NA	161132667	161120973	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161122524_161123074_161123222_161123838_161123947_161124137_161124527_161130814_161130848_161132550
H1_mix_00004403	chr1	-	2332	5	FSM	ENSG00000158796.17	ENST00000545495.5	2329	5	0	-3	0	0	multi-exon	FALSE	canonical	3	17	junction_4	132.737287526904	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTTCTGAAACTGCAGT	92	False	NA	-10	True	AATAAA	-20	NA	161132688	161120973	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161122524_161123074_161123222_161123838_161123947_161124137_161124527_161132550
H1_mix_00004407	chr1	-	2002	8	FSM	ENSG00000158850.15	ENST00000319769.10	1933	8	0	-69	0	69	multi-exon	FALSE	canonical	3	219	junction_6	48.9051560238211	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATAGAACAGCCAGACCAA	2	True	NA	42	True	NA	NA	NA	161177507	161171240	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161172090_161172226_161172332_161173604_161173728_161173858_161174050_161174992_161175229_161175807_161176075_161176433_161176580_161177422
H1_mix_00004408	chr1	-	2415	8	FSM	ENSG00000158850.15	ENST00000622395.4	2414	8	0	-1	0	0	multi-exon	FALSE	canonical	3	169	junction_6	65.0108311227084	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCCTGCTTTCTGCAT	3	False	NA	-27	True	AATAAA	-16	NA	161177968	161171309	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161172090_161172226_161172332_161173604_161173728_161173858_161174050_161174992_161175229_161175807_161176096_161176433_161176580_161177422
H1_mix_00004411	chr1	-	839	6	FSM	ENSG00000158850.15	ENST00000466504.5	839	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	132.377641616702	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGACTTCCTGCCACTTC	492	False	NA	NA	False	AATGAA	-42	NA	161177479	161173604	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161173728_161173858_161174050_161174992_161175229_161175807_161175894_161176433_161176580_161177422
H1_mix_00004412	chr1	-	680	4	FSM	ENSG00000158850.15	ENST00000482288.1	680	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	94.9046304923468	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGCAGGAGGAAGGAG	12	True	NA	NA	False	NA	NA	NA	161177497	161175807	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161176075_161176433_161176580_161176911_161177104_161177422
H1_mix_00004413	chr1	-	458	4	NNC	ENSG00000158874.11	novel	474	4	NA	NA	0	38825	intron_retention	FALSE	non_canonical	0	0	junction_1	1046.42576845608	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCAGGTGTGCTTGTGCA	218	False	NA	NA	False	NA	NA	NA	161223408	161183466	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_161183502_161222291_161222523_161222917_161223051_161223349
H1_mix_00004414	chr1	-	9777	9	FSM	ENSG00000158859.10	ENST00000367996.6	9777	9	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	7.17526131928308	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTCTTCCTTTGTCTGCT	-2	True	NA	NA	False	AATAAA	-21	NA	161199054	161184301	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161191565_161192064_161192241_161193212_161193389_161193639_161193827_161193934_161194222_161195464_161195636_161196170_161196304_161196556_161196881_161197994
H1_mix_00004415	chr1	-	2303	1	NIC	ENSG00000158859.10	novel	9777	9	NA	NA	3713	4426	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTCAACAAATAGCAGCTG	7677	False	NA	11	True	AATAAA	-31	NA	161192038	161189735	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_161189700_161192000
H1_mix_00004416	chr1	-	927	2	FSM	ENSG00000158874.11	ENST00000481413.1	927	2	0	0	0	0	multi-exon	FALSE	canonical	3	2141	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGAGCCTGGTATGTTT	13	False	NA	-14	True	AATAAA	-16	NA	161223613	161222291	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161222523_161222917
H1_mix_00004417	chr1	-	474	4	FSM	ENSG00000158874.11	ENST00000367990.7	474	4	0	0	0	0	multi-exon	FALSE	canonical	3	1512	junction_3	337.471315653477	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGAGCCTGGTATGTTT	-2	True	NA	-14	True	AATAAA	-16	NA	161223628	161222291	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161222523_161222917_161223051_161223349_161223426_161223594
H1_mix_00004418	chr1	-	401	3	FSM	ENSG00000158874.11	ENST00000463812.1	401	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	1045	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGAGCCTGGTATGTTT	-5	True	NA	-14	True	AATAAA	-16	NA	161223631	161222291	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161222523_161222917_161223051_161223594
H1_mix_00004419	chr1	-	530	4	FSM	ENSG00000158874.11	ENST00000464492.5	530	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	1030.42590978467	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAATAAATGCTGAATGAA	11	False	NA	-38	True	NA	NA	NA	161223615	161222315	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161222523_161222917_161223051_161223349_161223426_161223501
H1_mix_00004422	chr1	-	432	1	FSM	ENSG00000213075.7	ENST00000454082.1	372	1	-5	-55	-5	55	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACATAGGTTCTCGTTGGA	1933	False	NA	NA	False	AATAAA	-28	NA	161685214	161684782	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161684800_161685200
H1_mix_00004423	chr1	-	3179	8	FSM	ENSG00000162745.11	ENST00000294794.8	3175	8	0	-4	0	4	multi-exon	FALSE	canonical	3	14	junction_7	4.35655733770769	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGCACTTTTGTTCAGC	-1	True	NA	4	True	AATAAA	-22	NA	162023869	161983187	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161984277_161984803_161984981_161997824_161998350_162000112_162000339_162006296_162006474_162017399_162017508_162019918_162020183_162023256
H1_mix_00004425	chr1	-	5672	5	FSM	ENSG00000143248.13	ENST00000313961.10	5670	5	1	-3	0	3	multi-exon	FALSE	canonical	3	909	junction_1	45.2603579305334	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTCCTCCTTGACTCC	-2	True	NA	0	True	ATTAAA	-24	NA	163202915	163142295	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_163147504_163152549_163152717_163161914_163161977_163168257_163168369_163202791
H1_mix_00004426	chr1	-	832	4	FSM	ENSG00000232995.7	ENST00000451759.5	835	4	0	3	0	-3	multi-exon	FALSE	canonical	1	1	junction_1	5.90668171555645	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCCTTGTAGCTTGTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	163308577	163244507	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_163245032_163248529_163248707_163306232_163306330_163308543
H1_mix_00004427	chr1	-	626	2	FSM	ENSG00000232995.7	ENST00000528818.1	574	2	-25	-27	8	27	multi-exon	FALSE	canonical	3	22	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATGACCACTGTTTCTT	-19	True	NA	NA	False	AATGAA	-18	NA	163321766	163318810	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_163319292_163321621
H1_mix_00004429	chr1	-	4415	7	FSM	ENSG00000143183.18	ENST00000612311.4	4468	7	54	-1	0	1	multi-exon	FALSE	canonical	3	605	junction_4	38.9358446678636	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTAGTATTCCTTCATTT	7	True	NA	-1	True	ATTAAA	-16	NA	165768868	165724291	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_165728122_165743166_165743312_165752101_165752170_165754227_165754275_165759524_165759585_165768191_165768270_165768681
H1_mix_00004430	chr1	-	4346	7	FSM	ENSG00000143183.18	ENST00000464650.5	1100	7	0	-3246	0	1	multi-exon	FALSE	canonical	3	120	junction_6	210.471494506976	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTAGTATTCCTTCATTT	-1	True	NA	-1	True	ATTAAA	-16	NA	165768876	165724291	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_165728122_165743166_165743312_165752101_165752170_165754227_165754275_165759524_165759585_165768191_165768270_165768758
H1_mix_00004434	chr1	-	2456	2	FSM	ENSG00000188859.7	ENST00000354422.4	2481	2	25	0	-7	0	multi-exon	FALSE	canonical	3	17	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTGAGTTTCTGAAT	13	True	NA	NA	False	NA	NA	NA	166166976	166069298	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_166070764_166165985
H1_mix_00004435	chr1	-	2149	1	FSM	ENSG00000215835.2	ENST00000400979.2	1969	1	0	-180	0	180	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAACAAACAAAAAAAAACA	6	True	NA	NA	False	ATTAAA	-21	NA	166277597	166275448	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_166275400_166277600
H1_mix_00004436	chr1	-	2096	8	FSM	ENSG00000152382.6	ENST00000367874.5	2096	8	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_4	56.9496734505339	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTTGTTTATTAAACAT	-13	True	NA	-3	True	AATAAA	-16	NA	166876264	166856509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_166857720_166858118_166858282_166860185_166860338_166862202_166862413_166863823_166863922_166869444_166869511_166869762_166869855_166876159
H1_mix_00004437	chr1	-	660	1	FSM	ENSG00000272205.1	ENST00000606967.1	682	1	9	13	9	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	238	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCGAAATCGTAACTTCATC	1817	False	NA	-17	True	AATAAA	-4	NA	167220503	167219843	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_167219800_167220500
H1_mix_00004440	chr1	-	860	6	NNC	ENSG00000143158.11	novel	2177	5	NA	NA	0	12592	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	225.23996093056	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGAGGCCCGCTGCCTTCC	-18	True	NA	NA	False	NA	NA	NA	167936040	167904082	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_167904108_167918070_167918360_167919978_167920091_167920546_167920632_167924496_167924538_167935732
H1_mix_00004441	chr1	-	2219	5	FSM	ENSG00000143158.11	ENST00000367846.8	2177	5	0	-42	0	-12	multi-exon	FALSE	canonical	3	492	junction_3	49.7543967906355	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTCTCCTAAGCCCCTCT	-18	True	NA	30	True	ATTAAA	-14	NA	167936040	167916686	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_167918360_167919978_167920091_167920546_167920632_167924496_167924538_167935732
H1_mix_00004442	chr1	-	522	1	FSM	ENSG00000224837.1	ENST00000443090.1	522	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGGAACTCCTAAATAAA	NA	False	NA	NA	False	CATAAA	-17	NA	168056422	168055900	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_168055900_168056400
H1_mix_00004443	chr1	-	7815	6	FSM	ENSG00000143147.15	ENST00000682931.1	7815	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	26.1273802743406	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTGGAAATGGTGAATT	7	True	NA	-29	True	ATTAAA	-20	NA	168136930	168079541	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_168085797_168087584_168087705_168090563_168090669_168096507_168097233_168104476_168104895_168136738
H1_mix_00004444	chr1	-	8407	6	NIC	ENSG00000143147.15	novel	7815	6	NA	NA	-110	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_5	34.2029238516241	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTGGAAATGGTGAATT	643	False	NA	-29	True	ATTAAA	-20	NA	168137040	168079541	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_168085797_168087584_168087705_168090563_168090669_168096507_168097233_168104476_168104895_168136256
H1_mix_00004445	chr1	-	424	3	FSM	ENSG00000143156.14	ENST00000493481.1	424	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	178.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTTTGGTTTATTTCAT	NA	False	NA	NA	False	AATAAA	-18	NA	169230732	169132530	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_169132818_169169432_169169555_169230717
H1_mix_00004446	chr1	-	1472	12	FSM	ENSG00000143156.14	ENST00000367811.8	1472	12	0	0	0	0	multi-exon	TRUE	canonical	3	306	junction_7	38.6030872743028	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTTTGGTTTATTTCAT	-11	True	NA	NA	False	AATAAA	-18	NA	169367797	169132530	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_169132818_169169446_169169555_169230717_169230820_169235130_169235200_169237622_169237688_169287302_169287409_169298555_169298764_169303144_169303196_169309969_169310081_169323116_169323284_169324392_169324501_169367707
H1_mix_00004447	chr1	-	1882	6	FSM	ENSG00000117477.13	ENST00000367806.8	1917	6	57	-22	45	22	multi-exon	TRUE	canonical	0	0	junction_5	24.5324275195098	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTGCAACAAATTGAACAAC	-2	True	NA	22	True	AATAAA	-45	NA	169427417	169394847	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_169395207_169397236_169397392_169419012_169419160_169421362_169422314_169424810_169424951_169427287
H1_mix_00004448	chr1	-	1929	6	FSM	ENSG00000117477.13	ENST00000367805.7	1914	6	7	-22	-5	22	multi-exon	FALSE	canonical	0	0	junction_5	26.7237721888209	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTGCAACAAATTGAACAAC	-13	True	NA	22	True	AATAAA	-45	NA	169427467	169394847	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_169395207_169397236_169397389_169419012_169419160_169421362_169422314_169424810_169424951_169427287
H1_mix_00004449	chr1	-	1246	3	FSM	ENSG00000117477.13	ENST00000456107.1	1246	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	27.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAACCTAAGTGGGCAT	-8	True	NA	NA	False	AAGAAA	-24	NA	169427462	169421362	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_169422314_169424810_169424931_169427287
H1_mix_00004451	chr1	-	3946	6	FSM	ENSG00000117479.15	ENST00000236137.10	3612	6	13	-347	0	347	multi-exon	FALSE	canonical	3	152	junction_4	23.1982757979984	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATTAAAGCAAGAGCAGAA	30	False	NA	NA	False	AATAAA	-3	NA	169485931	169463561	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_169465978_169468110_169468253_169468643_169468837_169469963_169470187_169477154_169477758_169485562
H1_mix_00004455	chr1	-	2954	20	FSM	ENSG00000075945.13	ENST00000361580.7	2954	20	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_6	9.10298115608166	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGAAAGTCATGTGTTT	-45	True	NA	NA	False	ATTAAA	-21	NA	170074695	169921328	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_169921782_169954010_169954111_169961045_169961236_169972512_169972599_169978084_169978184_169981971_169982098_169982701_169982868_169983269_169983383_169984581_169984691_169992154_169992256_170016461_170016625_170024417_170024597_170031885_170031985_170034371_170034497_170035453_170035554_170038289_170038432_170039232_170039289_170046711_170046867_170055304_170055437_170074435
H1_mix_00004457	chr1	-	4981	8	FSM	ENSG00000117533.15	ENST00000236192.12	4977	8	0	-4	0	4	multi-exon	FALSE	canonical	3	119	junction_3	18.4844115239776	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTTTGGCTTATTCAATA	0	True	NA	NA	False	AATAAA	-26	NA	171742065	171700155	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_171704535_171706366_171706419_171709664_171709745_171710713_171710815_171719170_171719222_171728523_171728571_171738348_171738464_171741909
H1_mix_00004460	chr1	-	1456	2	FSM	ENSG00000135845.10	ENST00000344529.5	1456	2	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTTGTCTCATGATTTT	1	True	NA	-4	True	ATTAAA	-16	NA	172444069	172441456	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_172442831_172443987
H1_mix_00004461	chr1	-	2630	1	FSM	ENSG00000135845.10	ENST00000367728.1	2630	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTTGTCTCATGATTTT	11	True	NA	-4	True	ATTAAA	-16	NA	172444086	172441456	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_172441500_172444100
H1_mix_00004462	chr1	-	1370	2	FSM	ENSG00000203739.5	ENST00000661267.1	1370	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTGGAGCCTGTAGCTT	-21	True	NA	-2	True	AATAAA	-23	NA	173477171	173417792	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_173418623_173476631
H1_mix_00004465	chr1	-	2994	6	FSM	ENSG00000120334.16	ENST00000682279.1	2706	6	0	-288	0	288	multi-exon	FALSE	canonical	3	59	junction_5	9.8508882848198	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCATGATGTTTTATCC	-4	True	NA	NA	False	NA	NA	NA	173824883	173799261	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_173800520_173802962_173803506_173807266_173807519_173811131_173811307_173823925_173824020_173824211
H1_mix_00004469	chr1	-	566	11	ISM	ENSG00000234741.9	ENST00000451607.5	1007	12	686	-134	2	0	3prime_fragment	FALSE	canonical	3	1286	junction_5	510.943059449876	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTGTGTAGTGTTTAC	944	False	NA	-11	True	AATAAA	-15	NA	173867043	173863899	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865228_173865283_173865509_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990
H1_mix_00004470	chr1	-	773	10	ISM	ENSG00000234741.9	ENST00000436285.6	805	11	948	0	2	0	3prime_fragment	FALSE	canonical	3	2210	junction_4	266.391432035132	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTGTGTAGTGTTTAC	944	False	NA	-11	True	AATAAA	-15	NA	173867043	173863899	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_173864076_173864256_173864305_173864483_173864705_173865228_173865283_173865470_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990
H1_mix_00004471	chr1	-	633	12	FSM	ENSG00000234741.9	ENST00000687189.1	731	12	8	90	0	0	multi-exon	FALSE	canonical	3	1580	junction_11	440.04686076533	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTGTGTAGTGTTTAC	0	True	NA	-11	True	AATAAA	-15	NA	173867987	173863899	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865228_173865283_173865470_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
H1_mix_00004472	chr1	-	980	10	FSM	ENSG00000234741.9	ENST00000412059.6	985	10	4	1	0	0	multi-exon	FALSE	canonical	3	1580	junction_9	485.623793832018	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTGTGTAGTGTTTAC	0	True	NA	-11	True	AATAAA	-15	NA	173867987	173863899	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_173864076_173864256_173864705_173865228_173865283_173865470_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
H1_mix_00004473	chr1	-	1698	8	FSM	ENSG00000234741.9	ENST00000431268.5	1698	8	0	0	0	0	multi-exon	FALSE	canonical	3	1580	junction_7	526.648936238189	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	-2	True	NA	-12	True	AATAAA	-14	NA	173867989	173863900	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_173864076_173864256_173865283_173865470_173865548_173865856_173865895_173866176_173866207_173866527_173866797_173866990_173867044_173867959
H1_mix_00004474	chr1	-	822	11	FSM	ENSG00000234741.9	ENST00000436656.6	825	11	2	1	0	0	multi-exon	FALSE	canonical	3	1580	junction_10	426.353011013174	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	-2	True	NA	-12	True	AATAAA	-14	NA	173867989	173863900	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865228_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
H1_mix_00004475	chr1	-	745	10	ISM	ENSG00000234741.9	ENST00000422183.6	778	11	948	1	2	0	3prime_fragment	FALSE	canonical	3	1286	junction_4	538.557836457587	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGAGTGTGTAGTGTTT	944	False	NA	-13	True	AATAAA	-13	NA	173867043	173863901	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_173864305_173864483_173864507_173864674_173864705_173865228_173865283_173865509_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990
H1_mix_00004476	chr1	-	643	3	FSM	ENSG00000234741.9	ENST00000422207.5	643	3	0	0	0	0	multi-exon	FALSE	canonical	3	2781	junction_1	8.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTGGAGTGTGTAGTGT	3081	False	NA	-15	True	AATAAA	-11	NA	173864906	173863903	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_173864076_173864256_173864305_173864483
H1_mix_00004477	chr1	-	447	4	ISM	ENSG00000234741.9	ENST00000451607.5	1007	12	2824	-103	1	0	3prime_fragment	FALSE	canonical	3	2781	junction_1	8.25967446224258	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCCAATTTTAATAAATTT	3082	False	NA	-42	True	ATTAAA	-7	NA	173864905	173863930	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674
H1_mix_00004478	chr1	-	3145	2	FSM	ENSG00000234741.9	ENST00000650796.1	3145	2	0	0	0	0	multi-exon	FALSE	canonical	3	1580	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCCAATTTTAATAAATTT	-4	True	NA	-42	True	ATTAAA	-7	NA	173867991	173863930	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_173867044_173867959
H1_mix_00004480	chr1	-	712	11	FSM	ENSG00000234741.9	ENST00000449589.6	827	11	0	115	0	18	multi-exon	FALSE	canonical	3	1580	junction_10	451.16543528954	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGGCTCAAGTGATCCTC	-2	True	NA	-127	True	NA	NA	NA	173867989	173864015	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865228_173865283_173865470_173865548_173865856_173865895_173866176_173866207_173866527_173866797_173866990_173867044_173867959
H1_mix_00004482	chr1	-	1114	6	ISM	ENSG00000234741.9	ENST00000686231.1	465	8	946	487	2	-487	internal_fragment	FALSE	canonical	3	2783	junction_2	130.302110497106	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTGGCATATACACCTTA	944	False	NA	NA	False	TTTAAA	-34	NA	173867043	173864630	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990
H1_mix_00004486	chr1	-	11451	20	FSM	ENSG00000135870.12	ENST00000367696.7	11451	20	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_3	4.506074693264	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGGAGTAGCCAATTTT	0	True	NA	-1	True	AATAAA	-30	NA	174022357	173931083	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_173938872_173941264_173941381_173943441_173943616_173946475_173946609_173946745_173946837_173947368_173947583_173951985_173952139_173961076_173961245_173961724_173962096_173963972_173964188_173964838_173965121_173970504_173970618_173972508_173972628_173978487_173978621_173980808_173981010_173982726_173982903_173983417_173983658_173984498_173984620_173992754_173993136_174022095
H1_mix_00004490	chr1	-	693	1	FSM	ENSG00000235869.1	ENST00000441426.1	334	1	-110	-249	-110	249	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACTAAAGAGGATTCAAAA	9727	False	NA	NA	False	NA	NA	NA	174922550	174921857	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_174921900_174922600
H1_mix_00004491	chr1	-	2115	3	FSM	ENSG00000120333.4	ENST00000476371.1	2115	3	0	0	0	0	multi-exon	FALSE	canonical	3	986	junction_2	18	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGTTGGTATTATTAAGAG	-1	True	NA	0	True	ATTAAA	-14	NA	175023425	175012957	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_175014852_175018417_175018577_175023363
H1_mix_00004492	chr1	-	910	3	FSM	ENSG00000120333.4	ENST00000367677.3	910	3	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_2	469	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGCTCCCCTTAACTATT	9	True	NA	NA	False	NA	NA	NA	175023415	175014244	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_175014852_175018417_175018577_175023271
H1_mix_00004493	chr1	-	4550	4	FSM	ENSG00000235750.10	ENST00000423313.6	4548	4	0	-2	0	2	multi-exon	FALSE	canonical	3	48	junction_1	8.9566858950296	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTGCCATATTTCTTT	5	True	NA	0	True	AATAAA	-23	NA	175192776	175156983	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_175161147_175166561_175166738_175177610_175177685_175192639
H1_mix_00004494	chr1	-	3868	3	FSM	ENSG00000235750.10	ENST00000545251.6	2485	3	36	-1419	36	-547	multi-exon	FALSE	canonical	3	14	junction_2	17	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGATGTAGTCAGATGG	363	False	NA	NA	False	AATAAA	-19	NA	175192718	175157533	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_175161147_175166561_175166738_175192639
H1_mix_00004495	chr1	-	2025	18	FSM	ENSG00000143207.21	ENST00000367666.5	2022	18	0	-3	0	2	multi-exon	TRUE	canonical	3	66	junction_13	107.583362704444	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTTGGAAAGTTTTTGT	9	False	NA	-2	True	AATAAA	-40	NA	176184664	175944828	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_175945171_175947194_175947240_175986942_175987104_175988287_175988413_175989361_175989480_176027571_176027689_176043185_176043268_176043709_176043819_176046180_176046325_176081151_176081288_176085775_176085891_176116623_176116682_176135009_176135087_176149005_176149075_176162868_176162989_176163814_176163892_176175909_176176008_176184632
H1_mix_00004496	chr1	-	2036	18	FSM	ENSG00000143207.21	ENST00000367667.5	2034	18	0	-2	0	2	multi-exon	FALSE	canonical	3	18	junction_15	112.990644803669	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTTGGAAAGTTTTTGT	817	False	NA	-2	True	AATAAA	-40	NA	176206691	175944828	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_175945171_175947194_175947240_175986942_175987104_175988287_175988413_175989361_175989480_176027571_176027689_176043185_176043268_176043709_176043819_176046180_176046325_176081151_176081288_176085775_176085891_176116623_176116682_176135009_176135087_176136487_176136548_176149005_176149075_176175909_176176008_176184632_176184693_176206571
H1_mix_00004498	chr1	-	2839	17	NIC	ENSG00000143207.21	novel	2826	20	NA	NA	-207	1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_11	120.988635829982	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGCTTGGAAAGTTTTTG	15	False	NA	-3	True	AATAAA	-39	NA	176207493	175944829	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_175945171_175947194_175947240_175986942_175987104_175988287_175988413_175989361_175989480_176027571_176027689_176043185_176043268_176043709_176043819_176046180_176046325_176081151_176081288_176085775_176085891_176149005_176149075_176162868_176162989_176163814_176163892_176175909_176176008_176184632_176184693_176206571
H1_mix_00004500	chr1	-	4914	23	FSM	ENSG00000152092.16	ENST00000367657.7	4187	23	184	-911	0	911	multi-exon	FALSE	canonical	0	0	junction_1	5.25408145167416	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTATTTTATTTTGTTTA	26	True	NA	NA	False	AATATA	-12	NA	177164683	176856390	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_176857651_176868843_176869028_176876536_176876638_176882858_176882995_176884338_176884491_176888070_176888205_176894561_176894831_176934151_176934341_176936265_176936371_176943890_176944019_176945925_176946121_176949184_176949352_176957677_176957829_176958344_176958483_176965162_176965238_177014790_177014876_177023403_177023572_177024582_177024733_177029633_177029742_177030805_177030953_177032455_177032850_177061077_177061266_177164393
H1_mix_00004501	chr1	-	7138	23	FSM	ENSG00000152092.16	ENST00000361833.7	7138	23	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_17	4.47213595499958	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTATGTGGATGTTGTG	-3	True	NA	-2	True	AATAAA	-20	NA	177164712	176861066	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_176864522_176868843_176869028_176876536_176876638_176882858_176882995_176884338_176884491_176888070_176888205_176894561_176894831_176934151_176934341_176936265_176936371_176943890_176944019_176945925_176946121_176949184_176949352_176957677_176957829_176958344_176958483_176965162_176965238_177014790_177014876_177023403_177023572_177024582_177024733_177029633_177029742_177030805_177030953_177032455_177032850_177061077_177061266_177164393
H1_mix_00004502	chr1	-	2919	10	FSM	ENSG00000242193.11	ENST00000476232.6	2921	10	2	0	-1	0	multi-exon	FALSE	canonical	1	1	junction_3	7.16472842006823	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTTATCCTCCTTTCTA	15	True	NA	NA	False	AATAAA	-18	NA	178037948	178006135	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_178008150_178022439_178022669_178024403_178024487_178026154_178026256_178031550_178031661_178032429_178032496_178033026_178033086_178034704_178034802_178037693_178037802_178037896
H1_mix_00004503	chr1	-	2711	6	FSM	ENSG00000242193.11	ENST00000512906.2	770	6	-111	-1830	-108	0	multi-exon	FALSE	canonical	2	6	junction_3	8.38093073590279	1507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTTATCCTCCTTTCTA	NA	False	NA	NA	False	AATAAA	-18	NA	178038058	178006135	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_178008150_178022439_178022669_178026154_178026256_178034704_178034802_178037693_178037802_178037896
H1_mix_00004505	chr1	-	1003	1	FSM	ENSG00000228196.1	ENST00000423212.1	1072	1	133	-64	133	64	mono-exon	FALSE	NA	NA	NA	NA	NA	311	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGCCCACTCTGGAAACT	NA	False	NA	NA	False	TATAAA	-31	NA	178747621	178746618	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_178746600_178747600
H1_mix_00004508	chr1	-	7893	6	FSM	ENSG00000169905.13	ENST00000367612.7	7905	6	0	12	0	-3	multi-exon	TRUE	canonical	3	8	junction_4	30.4276190327143	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTTTTTCAGCGGACTG	3	True	NA	-16	True	AATAAA	-11	NA	179877799	179839978	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_179846829_179847534_179847637_179850844_179851364_179852631_179852812_179877238_179877374_179877692
H1_mix_00004509	chr1	-	8316	7	FSM	ENSG00000169905.13	ENST00000609928.6	8319	7	0	3	0	-3	multi-exon	FALSE	canonical	3	8	junction_4	28.5233822211415	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTTTTTCAGCGGACTG	-1	True	NA	-16	True	AATAAA	-11	NA	179877803	179839978	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_179846829_179847534_179847637_179850844_179851364_179852631_179852812_179865435_179865855_179877238_179877374_179877692
H1_mix_00004510	chr1	-	7486	8	NNC	ENSG00000169905.13	novel	8319	7	NA	NA	0	-933	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_5	27.2943142767268	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTATTATTATTATTATA	5221	False	NA	-2	True	AATAAA	-26	NA	179877790	179840908	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_179846829_179847534_179847637_179850844_179851364_179852631_179852812_179856057_179856171_179865435_179865855_179877238_179877374_179877692
H1_mix_00004511	chr1	-	7067	3	FSM	ENSG00000169905.13	ENST00000482587.5	7067	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	16.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAACTGTCATACATTTG	3	True	NA	-11	True	AATAAA	-37	NA	179877799	179859029	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_179865855_179877238_179877374_179877692
H1_mix_00004512	chr1	-	7749	2	FSM	ENSG00000169905.13	ENST00000495650.1	888	2	0	-6861	0	826	multi-exon	FALSE	canonical	3	10	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACATACACAAACATATATA	5221	False	NA	NA	False	AATATA	-3	NA	179877790	179858203	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_179865855_179877692
H1_mix_00004513	chr1	-	260	1	FSM	ENSG00000272906.1	ENST00000610272.1	989	1	496	233	496	-233	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTGAATTTTGTCACTT	912	False	NA	NA	False	NA	NA	NA	179882099	179881839	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_179881800_179882100
H1_mix_00004514	chr1	-	544	1	FSM	ENSG00000260360.1	ENST00000567904.1	1257	1	131	582	131	-582	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGACAGGAAATGTGGGTAA	523	False	NA	NA	False	NA	NA	NA	179954309	179953765	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_179953800_179954300
H1_mix_00004515	chr1	-	1306	8	FSM	ENSG00000230124.8	ENST00000367595.4	1293	8	0	-13	0	13	multi-exon	FALSE	canonical	3	545	junction_4	61.9693801940333	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATTCATTCTTCTTGCAT	5	True	NA	-7	True	AATAAA	-35	NA	180502577	180288216	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_180288518_180314691_180314723_180397515_180397606_180413365_180413472_180430179_180430263_180492268_180492366_180495460_180495526_180502044
H1_mix_00004516	chr1	-	4823	8	FSM	ENSG00000135823.14	ENST00000258301.6	4810	8	0	-13	0	0	multi-exon	FALSE	canonical	3	317	junction_4	27.2958096507467	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACTGAATTACTAGAATGA	25	True	NA	-22	True	AATAAA	-29	NA	181022870	180972711	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_180976647_180984676_180984772_180988238_180988346_180989983_180990110_180993362_180993426_181002605_181002701_181005293_181005464_181022638
H1_mix_00004518	chr1	-	4066	7	FSM	ENSG00000135821.19	ENST00000417584.6	4065	7	0	-1	0	0	multi-exon	FALSE	canonical	3	83	junction_6	792.270033230814	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTTGGATTTTGTTCAT	-20	True	NA	1	True	ACTAAA	-21	NA	182391404	182381703	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_182384724_182385356_182385557_182385759_182385888_182386255_182386403_182387130_182387293_182388571_182388751_182391174
H1_mix_00004520	chr1	-	6132	2	FSM	ENSG00000135821.19	ENST00000491322.1	6132	2	0	0	0	0	multi-exon	FALSE	canonical	3	2175	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTGATGTGTTTGTGA	8640	False	NA	-8	True	TATAAA	-17	NA	182390304	182382893	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_182387293_182388571
H1_mix_00004525	chr1	-	2408	5	FSM	ENSG00000143333.7	ENST00000367558.6	2408	5	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_3	24.1699710384601	383	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTGTCTTCAAGTGCTG	0	True	NA	-12	True	AATAAA	-19	NA	182604389	182598622	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_182600514_182601965_182602133_182602419_182602485_182603228_182603340_182604215
H1_mix_00004529	chr1	-	2050	1	FSM	ENSG00000232860.9	ENST00000624060.1	2246	1	-68	264	-68	-264	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGCCCACTCACGGCAAAG	5767	False	NA	NA	False	NA	NA	NA	183472333	183470283	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_183470300_183472300
H1_mix_00004530	chr1	-	6783	4	FSM	ENSG00000162704.16	ENST00000359856.11	7266	4	0	483	0	-483	multi-exon	FALSE	canonical	0	0	junction_3	429.392076726569	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACACAAGTCATTTTACA	1	True	NA	NA	False	NA	NA	NA	183635783	183621328	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_183627595_183630460_183630638_183633081_183633155_183635516
H1_mix_00004531	chr1	-	2165	4	NNC	ENSG00000162704.16	novel	7266	4	NA	NA	-171	76	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	429.392076726569	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTACTCTTAACAAGAACAG	NA	False	NA	53	True	NA	NA	NA	183635954	183626117	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_183627595_183630460_183630638_183633081_183633154_183635515
H1_mix_00004532	chr1	-	5296	12	FSM	ENSG00000198756.12	ENST00000361927.9	5179	12	40	-157	40	157	multi-exon	FALSE	canonical	2	8	junction_11	3.11222595793158	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCAGTGAGGGTTGTTTTA	48	False	NA	NA	False	NA	NA	NA	184037688	183935676	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_183939038_183940580_183940788_183944195_183944324_183945431_183945565_183951006_183951114_183954761_183954839_183963900_183964021_183969268_183969474_183973615_183973751_183975096_183975215_183978409_183978521_184037094
H1_mix_00004533	chr1	-	4728	12	NNC	ENSG00000198756.12	novel	5179	12	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_11	4.0696416882908	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATGATTGTCAATTGCTT	-27	True	NA	-3	True	ATTAAA	-18	NA	184037763	183935833	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_183939038_183940580_183940788_183944195_183944324_183945431_183945565_183951006_183951114_183954761_183954839_183963900_183964021_183969268_183969474_183973615_183973751_183975096_183975215_183978409_183978521_184037580
H1_mix_00004534	chr1	-	1091	1	FSM	ENSG00000271387.1	ENST00000605589.1	952	1	-171	32	-171	-32	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTCAAATTAAAAG	692	False	NA	NA	False	NA	NA	NA	184386875	184385784	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_184385800_184386900
H1_mix_00004535	chr1	-	6719	20	FSM	ENSG00000116406.20	ENST00000318130.13	6837	20	1	117	1	-117	multi-exon	FALSE	canonical	3	65	junction_7	8.45715943484402	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTTGTGGGCTAAAGTAA	-14	True	NA	NA	False	NA	NA	NA	184754857	184690353	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_184694473_184702810_184702997_184706642_184706809_184708152_184708345_184710393_184710548_184711722_184711878_184712432_184712599_184716887_184717013_184717539_184717624_184719161_184719246_184719442_184719569_184721288_184721387_184723750_184723857_184726254_184726390_184732836_184732991_184734530_184734644_184737024_184737065_184737610_184737712_184749546_184749593_184754488
H1_mix_00004536	chr1	-	6890	14	FSM	ENSG00000135842.17	ENST00000367511.4	6884	14	0	-6	0	6	multi-exon	FALSE	canonical	3	24	junction_1	7.04423890673421	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGATGTCATTTATTTGG	-12	True	NA	0	True	AATAAA	-22	NA	184974508	184791025	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_184796098_184798078_184798191_184803584_184803693_184805945_184806057_184808073_184808236_184818637_184818826_184823166_184823330_184823637_184823743_184831846_184831963_184884632_184884801_184890107_184890223_184894074_184894207_184899178_184899310_184974301
H1_mix_00004539	chr1	-	1941	1	FSM	ENSG00000279838.1	ENST00000623474.1	1989	1	-86	134	-86	-134	mono-exon	FALSE	NA	NA	NA	NA	NA	510	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGGGTGACAGAGTGAG	5388	False	NA	NA	False	NA	NA	NA	185294458	185292517	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_185292500_185294500
H1_mix_00004541	chr1	-	3657	16	FSM	ENSG00000116679.16	ENST00000459929.5	3657	16	0	0	0	0	multi-exon	TRUE	canonical	3	106	junction_8	493.903346370072	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGTGTCTAATGTGTAG	-1	True	NA	-6	True	GATAAA	-15	NA	185317273	185297014	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_185298289_185299709_185299884_185299998_185300131_185300216_185300344_185300436_185300559_185300971_185301197_185301433_185301564_185305535_185305644_185306484_185306626_185307013_185307140_185307488_185307663_185308799_185308876_185309002_185309173_185309382_185309512_185311094_185311323_185316952
H1_mix_00004542	chr1	-	9638	51	FSM	ENSG00000047410.14	ENST00000367478.9	9636	51	0	-2	0	2	multi-exon	FALSE	canonical	3	241	junction_45	88.0265778046608	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGTGTAATTCTTTAAAA	8	True	NA	NA	False	AATAAA	-9	NA	186375253	186311649	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_186314027_186314628_186314725_186317481_186317601_186318446_186318604_186318732_186318829_186320311_186320419_186322317_186322413_186322517_186322587_186323685_186323871_186325763_186325855_186326103_186326236_186327459_186327661_186331497_186331582_186332194_186332344_186333121_186333395_186334324_186334534_186335067_186335130_186335337_186335544_186336495_186336695_186337012_186337157_186338032_186338244_186339641_186339773_186341027_186341160_186341251_186341390_186343325_186343474_186343905_186344091_186344374_186344579_186345579_186345697_186346134_186346288_186347291_186347459_186350222_186350389_186351329_186351471_186351975_186352111_186353687_186353851_186355409_186355559_186355634_186355769_186356285_186356450_186357396_186357624_186358542_186358651_186359798_186359997_186360272_186360365_186360764_186360906_186361621_186361710_186361788_186361870_186362287_186362381_186362836_186363002_186363341_186363446_186367885_186367983_186370969_186371044_186373358_186373464_186374877
H1_mix_00004543	chr1	-	7581	52	NIC	ENSG00000047410.14	novel	9636	51	NA	NA	-51	-2174	combination_of_known_junctions	FALSE	canonical	3	38	junction_51	99.0880563265543	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTATTCATTTCTTCAT	-28	True	NA	-10	True	AATAAA	-20	NA	186375744	186313825	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_186314027_186314628_186314725_186317481_186317601_186318446_186318604_186318732_186318829_186320311_186320419_186322317_186322413_186322517_186322587_186323685_186323871_186325763_186325855_186326103_186326236_186327459_186327661_186331497_186331582_186332194_186332344_186333121_186333395_186334324_186334534_186335067_186335130_186335337_186335544_186336495_186336695_186337012_186337157_186338032_186338244_186339641_186339773_186341027_186341160_186341251_186341390_186343325_186343474_186343905_186344091_186344374_186344579_186345579_186345697_186346134_186346288_186347291_186347459_186350222_186350389_186351329_186351471_186351975_186352111_186353687_186353851_186355409_186355559_186355634_186355769_186356285_186356450_186357396_186357624_186358542_186358651_186359798_186359997_186360272_186360365_186360764_186360906_186361621_186361710_186361788_186361870_186362287_186362381_186362836_186363002_186363341_186363446_186367885_186367983_186370969_186371044_186373358_186373464_186374877_186375187_186375558
H1_mix_00004544	chr1	-	882	6	FSM	ENSG00000047410.14	ENST00000491783.5	882	6	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_1	25.4055112131207	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGATAGAAAAACTGGAACA	NA	False	NA	-39	True	NA	NA	NA	186356538	186351422	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_186351471_186351975_186352111_186353687_186353851_186355409_186355559_186355634_186355769_186356285
H1_mix_00004546	chr1	-	2757	19	FSM	ENSG00000047410.14	ENST00000474852.1	2757	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	75.8807544037939	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCAAAACTTACTGCTAAC	3	True	NA	75	True	NA	NA	NA	186375325	186352014	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_186352111_186353687_186353881_186355409_186355559_186355634_186355769_186356285_186356450_186357396_186357624_186358542_186358651_186359798_186359997_186360272_186360365_186360764_186360906_186361621_186361710_186361788_186361870_186362287_186362381_186362836_186363002_186363341_186363446_186367885_186367983_186370969_186371044_186373358_186373464_186374877
H1_mix_00004548	chr1	-	246	1	Intergenic	novelGene_128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAAACTCACTCAAA	NA	False	NA	NA	False	AATAAA	-25	NA	192246468	192246222	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_-_192246200_192246500
H1_mix_00004549	chr1	-	5336	11	FSM	ENSG00000116750.14	ENST00000367455.8	5327	11	0	-9	0	9	multi-exon	FALSE	canonical	3	211	junction_3	102.649111053141	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGTGTATTTTTAAAAAACA	-2	True	NA	NA	False	AATAAA	-30	NA	193059496	193012240	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_193016396_193021096_193021196_193022925_193023040_193023843_193023947_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
H1_mix_00004551	chr1	-	1329	9	FSM	ENSG00000116750.14	ENST00000420791.5	1329	9	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	207.188169305103	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTCAAGTGTTTGGGG	NA	False	NA	-15	True	AATAAA	-24	NA	193029575	193015758	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_193016396_193020306_193020382_193021096_193021196_193022925_193023040_193023843_193023947_193028084_193028149_193029178_193029310_193029387_193029450_193029531
H1_mix_00004552	chr1	-	1755	12	NIC	ENSG00000116750.14	novel	1346	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_1	177.377404991879	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTCAAGTGTTTGGGG	3	True	NA	-15	True	AATAAA	-24	NA	193059361	193015758	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_193016396_193020306_193020382_193021096_193021196_193022925_193023037_193023843_193023947_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
H1_mix_00004554	chr1	-	2146	11	FSM	ENSG00000116750.14	ENST00000367449.5	1507	11	113	-752	0	752	multi-exon	FALSE	canonical	3	68	junction_1	144.731648232168	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCAATATTCTATTAAGT	782	False	NA	71	True	AGTAAA	-19	NA	193059296	193017652	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_193018821_193021096_193021196_193022925_193023037_193023843_193023947_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
H1_mix_00004555	chr1	-	834	9	FSM	ENSG00000116750.14	ENST00000421683.1	834	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_8	172.439799277893	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCTTATTGAAGAAGAAGT	557	False	NA	-20	True	NA	NA	NA	193059521	193022967	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_193023037_193023843_193023947_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059412
H1_mix_00004556	chr1	-	917	1	ISM	ENSG00000023572.10	ENST00000608166.2	5612	5	13651	0	13632	0	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGAGTTCTGTATTTCA	NA	False	NA	-14	True	ATTAAA	-14	NA	193091782	193090865	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_193090900_193091800
H1_mix_00004557	chr1	-	5612	5	FSM	ENSG00000023572.10	ENST00000608166.2	5612	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	71.5240344220039	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGAGTTCTGTATTTCA	-19	True	NA	-14	True	ATTAAA	-14	NA	193105433	193090865	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_193095250_193095942_193096760_193097583_193097761_193101140_193101205_193105263
H1_mix_00004559	chr1	-	5883	27	FSM	ENSG00000162687.19	ENST00000367433.9	5883	27	0	0	0	0	multi-exon	TRUE	canonical	2	11	junction_13	7.55375215357461	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGATTTTTTTTTGCCA	17	True	NA	3	True	AATAAA	-28	NA	196608411	196225778	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_196228336_196235985_196236071_196258193_196258495_196280859_196280989_196282272_196282357_196285656_196285759_196305233_196305346_196315891_196316027_196326716_196326890_196331155_196331262_196333846_196334061_196340340_196340571_196342078_196342229_196373139_196373249_196398562_196398672_196423049_196423114_196425851_196425989_196428104_196428270_196429576_196429758_196465292_196465388_196467702_196467787_196468993_196469069_196479178_196479239_196482330_196482380_196489837_196489938_196492261_196492342_196608214
H1_mix_00004561	chr1	-	11085	29	FSM	ENSG00000066279.19	ENST00000680265.1	11085	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	49.5647767253796	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATTATTCCTGTCTATT	-21	True	NA	40	True	AATAAA	-20	NA	197146669	197084126	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_197084427_197086802_197086973_197088255_197088433_197089929_197090085_197090195_197090389_197090849_197091042_197091906_197092057_197093051_197093262_197094083_197094181_197095997_197096165_197097281_197097504_197100430_197105186_197117788_197117984_197121914_197122044_197122158_197122302_197122387_197122596_197124109_197124332_197124869_197124956_197125045_197125192_197128489_197128666_197129186_197129318_197129914_197130057_197132284_197132353_197133349_197133596_197135095_197135243_197139766_197139872_197142330_197143811_197143956_197144101_197146140
H1_mix_00004565	chr1	-	8698	11	FSM	ENSG00000177888.8	ENST00000467322.1	3779	11	-159	-4760	-159	0	multi-exon	FALSE	canonical	0	0	junction_4	7.41889479639656	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCATATCTAGGTTTTA	720	False	NA	NA	False	AATAAA	-22	NA	197200680	197153681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_197160015_197172159_197172249_197175009_197175116_197175930_197176015_197176563_197176671_197178416_197178513_197180987_197181118_197188291_197188440_197190761_197190832_197191691_197191900_197199353
H1_mix_00004566	chr1	-	8602	11	FSM	ENSG00000177888.8	ENST00000367405.5	8595	11	-7	0	-7	0	multi-exon	FALSE	canonical	2	12	junction_3	3.19374388453426	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCATATCTAGGTTTTA	-11	True	NA	NA	False	AATAAA	-22	NA	197201300	197153681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_197160015_197172159_197172249_197175009_197175116_197176563_197176671_197178416_197178513_197180987_197181118_197188291_197188440_197190761_197190832_197191691_197191900_197199353_197200591_197201222
H1_mix_00004569	chr1	-	526	3	FSM	ENSG00000151418.12	ENST00000367382.6	556	3	0	30	0	-28	multi-exon	FALSE	canonical	1	2	junction_1	0.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGGCACTGAATTAAACAAAA	7	True	NA	NA	False	NA	NA	NA	198540680	198523251	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_198523565_198529080_198529182_198540568
H1_mix_00004571	chr1	-	4875	2	FSM	ENSG00000162702.8	ENST00000367353.2	4864	2	0	-11	0	0	multi-exon	FALSE	canonical	3	172	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGATATTACTTAATATCC	-13	True	NA	-22	True	AATAAA	-29	NA	200410036	200404939	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_200409724_200409945
H1_mix_00004572	chr1	-	7470	2	FSM	ENSG00000162702.8	ENST00000294740.3	4891	2	-7	-2572	-7	2572	multi-exon	FALSE	canonical	3	121	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAGGTTAAGAATTTAGAA	589	False	NA	NA	False	AATAAA	-16	NA	200410063	200402367	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_200409720_200409945
H1_mix_00004574	chr1	-	2229	8	FSM	ENSG00000118197.14	ENST00000331314.11	2229	8	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	10.3292728471573	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTTTCTTTTTTCTTTT	-2	True	NA	80	True	AATAAA	-23	NA	200669907	200644036	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_200644518_200648438_200648568_200649073_200649227_200650424_200650677_200659026_200659117_200663918_200664087_200665936_200666752_200669766
H1_mix_00004576	chr1	-	9299	34	FSM	ENSG00000116852.15	ENST00000360529.9	5389	34	-306	-3604	0	4	multi-exon	TRUE	canonical	3	19	junction_7	11.0398726387032	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGAGGTGTCCCCTGTCC	5	True	NA	-11	True	AATAAA	-19	NA	201023714	200969385	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_200973579_200974713_200974914_200975498_200975670_200976775_200976894_200977211_200977377_200979534_200979716_200980959_200981097_200984858_200984973_200986843_200986919_200986995_200987202_200988295_200988354_200988492_200988545_200988765_200988932_200989941_200990044_200990137_200990333_200990575_200990724_200990916_200991150_200991656_200991726_200992281_200992390_200996195_200996396_200998383_200998576_200999348_200999467_200999882_200999965_201000389_201000609_201000716_201000781_201002160_201002351_201003585_201003782_201004339_201004456_201004765_201004934_201005307_201005443_201005544_201005695_201008768_201008952_201009265_201009489_201023342
H1_mix_00004577	chr1	-	1994	5	FSM	ENSG00000116857.17	ENST00000367330.6	1994	5	0	0	0	0	multi-exon	FALSE	canonical	3	1315	junction_4	67.0125921002911	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGGTTTTTAAGAGAT	9	True	NA	-3	True	ATTAAA	-18	NA	201154474	201134771	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_201135816_201143819_201143952_201146739_201146849_201151760_201151853_201153857
H1_mix_00004579	chr1	-	1564	6	FSM	ENSG00000116857.17	ENST00000367333.6	1564	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	566.280990321943	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGGTTTTTAAGAGAT	35	False	NA	-3	True	ATTAAA	-18	NA	201171574	201134771	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_201135816_201143819_201143952_201146739_201146849_201151760_201151853_201153857_201153960_201171489
H1_mix_00004580	chr1	-	1544	6	FSM	ENSG00000116857.17	ENST00000367332.5	1544	6	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_4	547.477341996909	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCTGGTTTTTAAGAGA	-18	True	NA	-4	True	ATTAAA	-17	NA	201154501	201134772	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_201135816_201143819_201143952_201146739_201146849_201151760_201151853_201153848_201153960_201154444
H1_mix_00004581	chr1	-	938	6	FSM	ENSG00000116857.17	ENST00000485839.6	938	6	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_5	535.26643832768	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGGGCTACTTCTCCCTT	50	False	NA	-81	True	NA	NA	NA	201154433	201135598	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_201135816_201143819_201143952_201146739_201146849_201151760_201151853_201153857_201153960_201154147
H1_mix_00004586	chr1	-	1116	15	FSM	ENSG00000118194.21	ENST00000412633.3	1108	15	0	-8	0	-1	multi-exon	TRUE	canonical	0	0	junction_12	27.2205654546975	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTCTGTCACGTCCCCTT	8707	False	NA	-10	True	AATAAA	-22	NA	201377666	201359009	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_201359256_201359622_201359664_201361278_201361370_201361912_201362023_201363295_201363407_201364297_201364376_201365190_201365308_201365609_201365671_201366837_201366872_201367770_201367807_201368161_201368228_201372026_201372042_201372144_201372156_201373213_201373269_201377622
H1_mix_00004587	chr1	-	1160	16	FSM	ENSG00000118194.21	ENST00000422165.6	1156	16	0	-4	0	-1	multi-exon	FALSE	canonical	0	0	junction_13	28.9654199961878	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTCTGTCACGTCCCCTT	0	True	NA	-10	True	AATAAA	-22	NA	201377680	201359009	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_201359256_201359622_201359664_201361278_201361370_201361912_201362023_201363295_201363407_201364297_201364376_201365190_201365308_201365609_201365671_201366837_201366872_201367770_201367807_201368161_201368228_201369815_201369846_201372026_201372042_201372144_201372156_201373213_201373269_201377622
H1_mix_00004590	chr1	-	2627	10	FSM	ENSG00000159166.15	ENST00000391967.7	2627	10	0	0	0	0	multi-exon	TRUE	canonical	3	199	junction_6	23.5613200493762	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTGATTGACTGCCCTA	-7	True	NA	-7	True	TTTAAA	-15	NA	201399324	201380832	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_201381894_201382251_201382327_201382652_201382740_201383073_201383212_201383316_201383390_201384791_201384836_201385700_201385806_201386334_201387179_201389159_201389304_201399268
H1_mix_00004595	chr1	-	5296	2	FSM	ENSG00000234678.2	ENST00000419190.2	5296	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTTATTTTTTTTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	202010463	201995695	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_202000328_202009799
H1_mix_00004596	chr1	-	1792	7	FSM	ENSG00000143862.8	ENST00000272217.7	1789	7	0	-3	0	3	multi-exon	FALSE	canonical	3	471	junction_2	45.5228880161764	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTATGGTGCTGGTTACT	-21	True	NA	-4	True	AATAAA	-23	NA	202144737	202133400	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_202134517_202135149_202135221_202135458_202135527_202135706_202135801_202137964_202138039_202138367_202138449_202144449
H1_mix_00004598	chr1	-	878	7	FSM	ENSG00000077152.11	ENST00000646651.1	878	7	0	0	0	0	multi-exon	FALSE	canonical	3	1044	junction_6	150.511812013395	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGTTTATCCTGAATG	-2	True	NA	-2	True	AATAAA	-18	NA	202341936	202331656	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_202331961_202333009_202333094_202333236_202333336_202333449_202333556_202334988_202335059_202335645_202335819_202341894
H1_mix_00004599	chr1	-	1064	6	FSM	ENSG00000077152.11	ENST00000487227.6	1065	6	1	0	1	0	multi-exon	FALSE	canonical	3	1044	junction_5	143.657091714959	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGTTTATCCTGAATG	7310	False	NA	-2	True	AATAAA	-18	NA	202341979	202331656	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_202331961_202333009_202333336_202333449_202333556_202334988_202335059_202335645_202335819_202341894
H1_mix_00004600	chr1	-	824	7	FSM	ENSG00000077152.11	ENST00000643045.1	824	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	518.119677294735	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGTAGTTTATTTAT	7330	False	NA	-11	True	AATATA	-14	NA	202341959	202331737	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_202331961_202333009_202333094_202333236_202333336_202333449_202333556_202334988_202335059_202335641_202335819_202341894
H1_mix_00004602	chr1	-	344	2	Genic_Genomic	ENSG00000236439.4	novel	254	1	NA	NA	0	50897	multi-exon	FALSE	non_canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGGCAGAGGGAAAAGAATC	34	False	NA	NA	False	AAAAAG	-1	NA	202472117	202420966	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_-_202420989_202471795
H1_mix_00004603	chr1	-	254	1	FSM	ENSG00000236439.4	ENST00000422457.2	254	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCACTCTGAGTCAAGAT	34	False	NA	NA	False	NA	NA	NA	202472117	202471863	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_202471900_202472100
H1_mix_00004604	chr1	-	7635	9	FSM	ENSG00000143858.12	ENST00000367268.5	7635	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	8.03118920210451	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGGGTGGGGGGTGTCT	5	True	NA	NA	False	ATTAAA	-19	NA	202710454	202590595	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_202596964_202599217_202599352_202600356_202600475_202601889_202602058_202602377_202602546_202602998_202603119_202604454_202604622_202605594_202605790_202710257
H1_mix_00004605	chr1	-	9293	27	FSM	ENSG00000117139.18	ENST00000367265.9	9292	27	0	-1	0	1	multi-exon	FALSE	canonical	3	838	junction_21	104.422304856191	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGATTTTTTTTTTTG	-4	True	NA	NA	False	CATAAA	-19	NA	202808421	202724493	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_202729174_202729706_202730028_202730908_202731064_202731827_202731940_202733400_202733887_202735428_202735588_202736212_202736393_202740673_202740813_202741366_202741723_202742390_202742506_202742654_202742806_202745857_202745983_202746141_202746324_202748944_202749140_202750658_202750779_202752904_202753068_202755270_202755453_202756357_202756517_202758390_202758511_202760414_202760574_202762698_202762809_202764048_202764146_202766925_202767061_202773117_202773289_202774612_202774736_202777016_202777095_202808101
H1_mix_00004606	chr1	-	6543	28	FSM	ENSG00000117139.18	ENST00000367264.7	6520	28	0	-23	0	0	multi-exon	FALSE	canonical	3	74	junction_22	269.403522411117	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGACTTCTAGTTGTC	-5	True	NA	31	True	ATTAAA	-8	NA	202808481	202727411	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_202729174_202729706_202730028_202730908_202731064_202731827_202731940_202733400_202733887_202735428_202735588_202736212_202736393_202740673_202740813_202741366_202741723_202742390_202742506_202742654_202742806_202745857_202745983_202746141_202746324_202748944_202749140_202750658_202750779_202752904_202753068_202755270_202755453_202756357_202756517_202758390_202758511_202760414_202760574_202762698_202762809_202764048_202764146_202766396_202766505_202766925_202767061_202773117_202773289_202774612_202774736_202777016_202777095_202808101
H1_mix_00004607	chr1	-	6212	26	FSM	ENSG00000117139.18	ENST00000650569.1	6202	26	0	-10	0	0	multi-exon	FALSE	canonical	3	52	junction_22	215.795087988582	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTCAAATAATTAAATCTC	1	True	NA	8	True	TTTAAA	-21	NA	202808416	202727434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_202729174_202729706_202730028_202730908_202731064_202731827_202731940_202733400_202733887_202735428_202735588_202736212_202736393_202740673_202740813_202741366_202741723_202742390_202742506_202742654_202742806_202745857_202745983_202746141_202746324_202748944_202749140_202750658_202750779_202752904_202753068_202755270_202755453_202756357_202756517_202758390_202758511_202760414_202760574_202762698_202762809_202764048_202764146_202773117_202773289_202774612_202774736_202777016_202777095_202808101
H1_mix_00004608	chr1	-	6403	27	FSM	ENSG00000117139.18	ENST00000648056.1	6390	27	0	-13	0	0	multi-exon	FALSE	canonical	3	150	junction_26	197.963103967745	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTCAAATAATTAAATCTC	-11	True	NA	8	True	TTTAAA	-21	NA	202808487	202727434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_202729174_202729706_202730028_202730908_202731064_202731827_202731940_202733400_202733887_202735428_202735588_202736212_202736393_202740673_202740813_202741366_202741723_202742390_202742506_202742654_202742806_202745857_202745983_202746141_202746324_202748944_202749140_202750658_202750779_202752904_202753068_202755270_202755453_202756357_202756517_202758390_202758511_202760414_202760574_202762698_202762809_202764048_202764146_202766925_202767061_202773117_202773289_202774612_202774736_202777016_202777095_202808116
H1_mix_00004614	chr1	-	2382	4	NNC	ENSG00000214796.9	novel	1982	3	NA	NA	-33	2169	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	72.0061725749181	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCAGTCTTTGCCTGAC	98	False	NA	-7	True	AATAAA	-13	NA	202861654	202849658	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_202850200_202851867_202853281_202858881_202859103_202861447
H1_mix_00004615	chr1	-	1835	3	FSM	ENSG00000214796.9	ENST00000443294.6	1982	3	147	0	12	0	multi-exon	FALSE	canonical	3	93	junction_1	49	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGTTCAAGCGATTCTCC	9	True	NA	NA	False	NA	NA	NA	202861608	202851827	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_202853281_202858881_202859103_202861447
H1_mix_00004618	chr1	-	4943	2	FSM	ENSG00000183155.5	ENST00000367262.4	3119	2	-70	-1754	-70	1754	multi-exon	FALSE	canonical	3	231	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGTAAAAGTTAAATGAAAA	-3	True	NA	NA	False	NA	NA	NA	202889219	202876527	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_202881224_202888972
H1_mix_00004622	chr1	-	879	6	FSM	ENSG00000159346.13	ENST00000426229.1	879	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	539.605559645191	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAGTTAAAAGAACACCAT	5	True	NA	NA	False	NA	NA	NA	202958285	202944982	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_202945170_202946438_202946611_202948303_202948421_202950929_202951165_202954240_202954308_202958184
H1_mix_00004623	chr1	-	1625	9	FSM	ENSG00000159348.13	ENST00000367249.9	1624	9	0	-1	0	1	multi-exon	FALSE	canonical	3	80	junction_4	9.48683298050514	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGTTGTGTCTGGGGTCC	-11	True	NA	-3	True	AATAAA	-32	NA	202967257	202961871	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_202962700_202963065_202963166_202963641_202963728_202964611_202964696_202965370_202965501_202965886_202965994_202966527_202966601_202966748_202966899_202967190
H1_mix_00004626	chr1	-	291	1	FSM	ENSG00000232917.5	ENST00000479457.1	291	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGTCACTATTGAAATG	30	False	NA	NA	False	NA	NA	NA	203904013	203903722	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_203903700_203904000
H1_mix_00004627	chr1	-	2431	8	FSM	ENSG00000143845.15	ENST00000367201.7	2431	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	74.7217969455735	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTGTCTTGAGTGACA	-2	True	NA	-1	True	ATTAAA	-16	NA	204151894	204131061	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_204132257_204134514_204134695_204137103_204137250_204140034_204140119_204141314_204141458_204146641_204146765_204149702_204149963_204151594
H1_mix_00004628	chr1	-	2335	7	NIC	ENSG00000143845.15	novel	2475	8	NA	NA	17	0	intron_retention	FALSE	canonical	3	16	junction_5	81.4897744096358	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTGTCTTGAGTGACA	3	True	NA	-1	True	ATTAAA	-16	NA	204152027	204131061	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_204132257_204134514_204134589_204137103_204137250_204140034_204140119_204141314_204141458_204149702_204149963_204151594
H1_mix_00004629	chr1	-	2475	8	FSM	ENSG00000143845.15	ENST00000367202.9	2475	8	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_2	24.5398468135531	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTGTCTTGAGTGACA	-14	True	NA	-1	True	ATTAAA	-16	NA	204152044	204131061	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_204132257_204134514_204134589_204137103_204137250_204140034_204140119_204141314_204141458_204146641_204146765_204149702_204149963_204151594
H1_mix_00004630	chr1	-	782	5	FSM	ENSG00000174567.8	ENST00000308302.4	776	5	0	-6	0	6	multi-exon	TRUE	canonical	3	39	junction_1	9.62743475698485	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGAGTTGGCGTCTTTG	-5	True	NA	0	True	ATTAAA	-26	NA	204213988	204198156	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_204198497_204199194_204199259_204201632_204201812_204202895_204202988_204213881
H1_mix_00004634	chr1	-	5605	23	NIC	ENSG00000143850.16	novel	5091	23	NA	NA	-186	27	combination_of_known_junctions	FALSE	canonical	2	4	junction_22	15.2122721228782	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTTGTTTGGATGTCTG	7118	False	NA	-32	True	AATATA	-43	NA	204307581	204220728	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_204222780_204223461_204223586_204228082_204228229_204228727_204228862_204228936_204229105_204230412_204230587_204241374_204241482_204241684_204241815_204244863_204245004_204245614_204245727_204247364_204247461_204248820_204248971_204249183_204249265_204250545_204250615_204257352_204257870_204259257_204259741_204261305_204261509_204264941_204265043_204267474_204267548_204268207_204268313_204273625_204273741_204274728_204274810_204307336
H1_mix_00004635	chr1	-	507	1	FSM	ENSG00000219133.2	ENST00000403842.2	483	1	-3	-21	-3	21	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAATGGGAGAAATATCGC	3736	False	NA	NA	False	NA	NA	NA	204347261	204346754	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_204346800_204347300
H1_mix_00004636	chr1	-	495	1	FSM	ENSG00000280924.1	ENST00000628516.1	1289	1	618	176	618	-176	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCCTATGAGTGATCTTT	9273	False	NA	NA	False	NA	NA	NA	204369101	204368606	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_204368600_204369100
H1_mix_00004638	chr1	-	7590	34	FSM	ENSG00000133056.14	ENST00000367187.7	7686	34	91	5	13	0	multi-exon	FALSE	canonical	2	2	junction_33	14.641413270337	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAACTATAATTTTATTTA	5002	False	NA	NA	False	AATAAA	-19	NA	204490333	204422632	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_204425041_204425612_204425742_204427647_204427755_204428138_204428221_204429920_204430039_204431668_204431794_204432199_204432402_204433315_204433426_204433792_204433950_204434438_204434609_204438934_204439072_204440191_204440322_204441470_204441564_204442525_204442634_204443416_204443598_204444067_204444163_204444330_204444425_204445955_204446145_204447435_204447579_204449184_204449297_204449849_204450018_204454668_204454792_204455855_204456052_204457036_204457071_204457727_204457875_204459877_204459942_204460323_204460404_204460549_204460662_204464011_204464133_204464449_204464605_204465218_204465320_204468869_204469887_204489815_204489932_204490067
H1_mix_00004639	chr1	-	7506	35	FSM	ENSG00000133056.14	ENST00000424712.6	7522	35	13	3	13	0	multi-exon	FALSE	canonical	2	2	junction_34	16.7603967630238	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAACTATAATTTTATTTA	5002	False	NA	NA	False	AATAAA	-19	NA	204490333	204422632	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_204425041_204425612_204425742_204427647_204427755_204428138_204428221_204429920_204430039_204431668_204431794_204432199_204432402_204433315_204433426_204433792_204433950_204434438_204434609_204438934_204439072_204440191_204440322_204441470_204441564_204442525_204442634_204443416_204443598_204444067_204444163_204444330_204444425_204445955_204446003_204446086_204446145_204447435_204447579_204449184_204449297_204449849_204450018_204454668_204454792_204455855_204456052_204457036_204457071_204457727_204457875_204459877_204459942_204460323_204460404_204460549_204460662_204464011_204464133_204464449_204464605_204465218_204465320_204468869_204469887_204489815_204489932_204490067
H1_mix_00004640	chr1	-	7658	33	FSM	ENSG00000133056.14	ENST00000684373.1	7658	33	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_32	8.71040146893356	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAACTATAATTTTATTTA	7	True	NA	NA	False	AATAAA	-19	NA	204494805	204422632	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_204425041_204425612_204425742_204427647_204427755_204428138_204428221_204429920_204430039_204431668_204431794_204432199_204432402_204433315_204433426_204433792_204433950_204434438_204434609_204438934_204439072_204440191_204440322_204441470_204441564_204442525_204442634_204443416_204443598_204444067_204444163_204444330_204444425_204445955_204446145_204447435_204447579_204449184_204449297_204449849_204450018_204454668_204454792_204455855_204456052_204457036_204457071_204457727_204457875_204459877_204459942_204460323_204460404_204460549_204460662_204464011_204464133_204464449_204464605_204465218_204465320_204468869_204469887_204494355
H1_mix_00004641	chr1	-	727	3	FSM	ENSG00000133056.14	ENST00000429009.1	727	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	3	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGCCTGGGGTAGACTTT	634	False	NA	NA	False	NA	NA	NA	204494701	204469621	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_204469887_204489815_204489932_204494355
H1_mix_00004642	chr1	-	3468	2	FSM	ENSG00000170382.12	ENST00000367177.4	3468	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTGAGTATTGAGTGTG	-17	True	NA	-7	True	AATAAA	-42	NA	204685738	204617169	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_204620219_204685319
H1_mix_00004645	chr1	-	7372	14	FSM	ENSG00000174529.7_ENSG00000117222.14	ENST00000264515.11	4367	14	12	-3017	0	4	multi-exon	FALSE	canonical	3	37	junction_1	12.9409217454284	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGAGACCTTTTTCTGCT	9	True	NA	-14	True	AATAAA	-19	NA	205121966	205083124	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_205088816_205094872_205095065_205096681_205096912_205097325_205097396_205098988_205099107_205099740_205099813_205099910_205100065_205100151_205100272_205101599_205101710_205103856_205104020_205105027_205105169_205114788_205114962_205115857_205115884_205121854
H1_mix_00004646	chr1	-	7749	12	FSM	ENSG00000133059.17	ENST00000367161.7	7739	12	0	-10	0	10	multi-exon	TRUE	canonical	3	10	junction_1	8.54932214218818	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTGGTTTTGGTTTTC	-12	True	NA	1	True	AATAAA	-27	NA	205211566	205142494	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_205147746_205150679_205150795_205157272_205157387_205159546_205159680_205160113_205160271_205161257_205161388_205162035_205162213_205162922_205163007_205163722_205163956_205169162_205169833_205187417_205187807_205211270
H1_mix_00004647	chr1	-	8017	13	FSM	ENSG00000133059.17	ENST00000367162.8	8010	13	0	-7	0	7	multi-exon	FALSE	canonical	3	24	junction_12	5.45371942398539	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATCTGTTTGGTTTTGGTT	11	True	NA	-2	True	AATAAA	-24	NA	205211702	205142497	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_205147746_205148204_205148340_205150679_205150795_205157272_205157387_205159546_205159680_205160113_205160271_205161257_205161388_205162035_205162213_205162922_205163007_205163722_205163956_205169162_205169833_205187417_205187807_205211270
H1_mix_00004650	chr1	-	6678	3	NIC	ENSG00000281406.2	novel	6454	3	NA	NA	-156	-1	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	2	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTTTGCAGTAAATGGAT	NA	False	NA	NA	False	AATAAA	-15	NA	205457247	205434885	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_205441063_205455916_205456036_205456865
H1_mix_00004652	chr1	-	10288	5	FSM	ENSG00000158711.14	ENST00000357992.9	10288	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	14.5666571319572	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTGAATTGATTATTTA	-14	True	NA	NA	False	AATAAA	-18	NA	205632011	205607942	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_205616645_205618956_205619074_205619965_205620839_205623675_205623892_205631631
H1_mix_00004653	chr1	-	2118	3	FSM	ENSG00000158711.14	ENST00000289703.8	2118	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	8.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTTATTATCACCTTTAT	35	False	NA	-18	True	AATAAA	-18	NA	205631962	205619267	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_205620839_205623675_205623892_205631631
H1_mix_00004654	chr1	-	2448	3	FSM	ENSG00000158715.6	ENST00000460934.1	2448	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	18.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCATGTGTTTCTTTTAG	7115	False	NA	-5	True	ATTAAA	-19	NA	205662668	205657850	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_205659672_205661860_205662127_205662307
H1_mix_00004655	chr1	-	2763	4	NNC	ENSG00000158715.6	novel	3391	5	NA	NA	8286	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	17.7200451466693	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCATGTGTTTCTTTTAG	8398	False	NA	-5	True	ATTAAA	-19	NA	205672223	205657850	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_205659672_205661860_205662127_205664484_205664887_205671949
H1_mix_00004657	chr1	-	6054	8	NNC	ENSG00000069275.13	novel	6399	7	NA	NA	0	13526	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	31.9808616238538	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGTTCATTCCTTTTTA	14	True	NA	NA	False	AAAAAG	-1	NA	205750182	205699295	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_205699325_205713192_205718480_205719526_205719674_205720500_205720654_205723925_205723982_205727699_205727806_205729571_205729622_205749956
H1_mix_00004658	chr1	-	6399	7	FSM	ENSG00000069275.13	ENST00000367142.5	6399	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_6	22.4623141184419	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACACACTTGCATTCAATT	14	True	NA	-3	True	AATAAA	-21	NA	205750182	205712821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_205718480_205719526_205719677_205720500_205720654_205723925_205723982_205727699_205727806_205729571_205729622_205749956
H1_mix_00004660	chr1	-	3461	5	FSM	ENSG00000117280.13	ENST00000414729.1	1157	5	10	-2314	0	0	multi-exon	FALSE	canonical	3	79	junction_4	17.0348906659245	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGGTGGTTATTGGCCT	19	True	NA	-12	True	AATAAA	-19	NA	205775449	205767985	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_205770454_205770732_205770855_205771471_205771654_205772495_205772568_205774832
H1_mix_00004661	chr1	-	5017	11	FSM	ENSG00000133065.11	ENST00000367137.4	5017	11	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_5	12.6653069445632	1024	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTTGGTGTTTCCTGTA	-6	True	NA	-5	True	AATAAA	-16	NA	205813198	205789094	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_205791719_205794869_205795019_205795343_205795479_205796923_205797004_205797903_205798052_205798668_205798816_205798956_205799102_205799758_205799831_205800952_205801061_205810069_205811088_205812807
H1_mix_00004662	chr1	-	4675	11	NIC	ENSG00000133065.11	novel	5017	11	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_10	33.3683982234689	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTTGGTGTTTCCTGTA	14	False	NA	-5	True	AATAAA	-16	NA	205813743	205789094	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_205791719_205794869_205795019_205795343_205795479_205796923_205797004_205797903_205798052_205798668_205798816_205798956_205799102_205799758_205799831_205800952_205801061_205810069_205811088_205813694
H1_mix_00004663	chr1	-	2364	4	FSM	ENSG00000196550.11	ENST00000367128.8	2364	4	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	47.7656315310031	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGGCTAATGTTTATTG	31	False	NA	NA	False	AATAAA	-20	NA	206202839	206186178	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_206187374_206195751_206195877_206199806_206199885_206201873
H1_mix_00004664	chr1	-	1774	4	FSM	ENSG00000196550.11	ENST00000341209.9	1774	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	80.3008232972877	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCTTCCTTTAATTTTT	424	False	NA	NA	False	AATAAA	-18	NA	206202446	206186255	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_206187374_206195751_206195877_206199806_206199885_206201993
H1_mix_00004666	chr1	-	2016	15	FSM	ENSG00000143486.16	ENST00000271764.7	2011	15	0	-5	0	5	multi-exon	FALSE	canonical	3	153	junction_11	21.3369469728555	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCTCTTGTTTCCTCCA	-7	True	NA	1	True	AATAAA	-24	NA	206612465	206591636	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_206591846_206593618_206593794_206595717_206595839_206597099_206597196_206599002_206599093_206599462_206599613_206599732_206599837_206600262_206600309_206602335_206602454_206602950_206603205_206605399_206605508_206608235_206608327_206609375_206609460_206611183_206611375_206612286
H1_mix_00004667	chr1	-	5224	4	FSM	ENSG00000143486.16	ENST00000617960.4	5224	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	91.4561218411442	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTCTGTGTGATACAGAG	9049	False	NA	-2	True	AATAAA	-18	NA	206603501	206594039	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_206595839_206597099_206597196_206599002_206599093_206600262
H1_mix_00004670	chr1	-	463	1	FSM	ENSG00000224114.1	ENST00000451736.1	433	1	-60	30	-60	-30	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACCCGCAGGAAGGGGGG	NA	False	NA	NA	False	NA	NA	NA	206696329	206695866	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_206695900_206696300
H1_mix_00004672	chr1	-	6519	2	FSM	ENSG00000180667.11	ENST00000315927.9	6396	2	-123	0	-123	0	multi-exon	FALSE	canonical	3	56	junction_1	0	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGAGTATATTTTGGGA	1775	False	NA	-10	True	AATAAA	-15	NA	207051331	207043848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_207049724_207050687
H1_mix_00004674	chr1	-	11490	32	FSM	ENSG00000076356.7	ENST00000367033.4	11508	32	0	18	0	-18	multi-exon	TRUE	canonical	3	27	junction_30	7.85958987261172	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTAAATCTTTAAATAAACC	-1	True	NA	NA	False	AATAAA	-21	NA	208244384	208022259	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_208027339_208028008_208028160_208028829_208029043_208031589_208031760_208033318_208033510_208034492_208034593_208038370_208038475_208038824_208038985_208039620_208039768_208039991_208040059_208042097_208042367_208043060_208043204_208044507_208044743_208045066_208045211_208045877_208046118_208051008_208051103_208051255_208051424_208052326_208052464_208054420_208054539_208060685_208060838_208079259_208079451_208082411_208082509_208084379_208084581_208092785_208092901_208096028_208096126_208096729_208096884_208098845_208098970_208103146_208103248_208142328_208142464_208210279_208210463_208216734_208218003_208243642
H1_mix_00004676	chr1	-	586	2	NIC	ENSG00000232537.2	novel	473	3	NA	NA	-226	-5	combination_of_known_splicesites	FALSE	canonical	3	3	junction_1	0	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATCTTTTATTTTAGTG	NA	False	NA	-11	True	GATAAA	-10	NA	209155327	209147278	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_209147595_209155057
H1_mix_00004679	chr1	-	4942	9	FSM	ENSG00000117595.12	ENST00000367021.8	4478	9	0	-464	0	464	multi-exon	FALSE	canonical	3	84	junction_2	9.62743475698485	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGCTCACTGCAGTAC	-7	True	NA	97	True	NA	NA	NA	209806142	209785152	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_209788645_209789666_209789786_209790494_209790888_209792268_209792428_209795289_209795419_209796347_209796553_209801239_209801417_209801971_209802044_209805946
H1_mix_00004681	chr1	-	726	2	FSM	ENSG00000203706.8	ENST00000437764.5	726	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTGAAGGTGTTTTT	116	False	NA	1	True	AATAAA	-35	NA	210234044	210231455	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_210231772_210233634
H1_mix_00004685	chr1	-	2135	8	FSM	ENSG00000117650.13	ENST00000366999.9	2134	8	0	-1	0	1	multi-exon	FALSE	canonical	3	148	junction_1	20.6081022307009	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGTCTTGCATTTGTT	5	True	NA	1	True	AATAAA	-24	NA	211675621	211662770	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_211663653_211667105_211667232_211669112_211669333_211670280_211670408_211671201_211671285_211673482_211673724_211674295_211674514_211675383
H1_mix_00004686	chr1	-	5649	7	FSM	ENSG00000117650.13	ENST00000366998.4	1865	7	-125	-3659	-52	1	multi-exon	FALSE	canonical	3	172	junction_2	15.0738920727934	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGTCTTGCATTTGTT	NA	False	NA	1	True	AATAAA	-24	NA	211675682	211662770	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_211667232_211669112_211669333_211670280_211670408_211671201_211671285_211673482_211673724_211674295_211674514_211675383
H1_mix_00004688	chr1	-	6308	9	NIC	ENSG00000123684.13	novel	7773	8	NA	NA	39	-1533	combination_of_known_splicesites	FALSE	canonical	3	46	junction_3	11.179641094418	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAATTAAAGTGCTTTTAA	151	False	NA	NA	False	AATAAA	-11	NA	211830683	211744989	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_211750051_211750960_211751068_211778917_211779045_211783228_211783503_211787631_211787728_211793071_211793191_211829058_211829324_211830182_211830331_211830572
H1_mix_00004689	chr1	-	4434	20	FSM	ENSG00000143493.13	ENST00000366994.8	4430	20	0	-4	0	0	multi-exon	FALSE	canonical	0	0	junction_3	47.070231019185	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCCTTTTTCTCTTCAA	-21	True	NA	-2	True	AATAAA	-21	NA	212035557	211940398	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_211942112_211944783_211944970_211946606_211946706_211952568_211952702_211966429_211966499_211967877_211967982_211968512_211968708_211975165_211975373_211976581_211976720_211978271_211978512_211981092_211981191_211982675_211982811_211987885_211988004_212006638_212006762_212007249_212007450_212011374_212011422_212016885_212017024_212020121_212020269_212021082_212021213_212035343
H1_mix_00004691	chr1	-	2662	17	ISM	ENSG00000143493.13	ENST00000366992.7	3380	20	0	10950	0	121	5prime_fragment	FALSE	canonical	3	141	junction_2	23.1718275876116	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAACAATTTAACTG	16	True	NA	NA	False	AATAAA	-9	NA	212035520	211952305	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_211952702_211966429_211966499_211967877_211967982_211968512_211968708_211975165_211975373_211976581_211976720_211978271_211978512_211981092_211981191_211982675_211982811_211987885_211988004_212006638_212006762_212007249_212007450_212011374_212011422_212016885_212017024_212020121_212020269_212021082_212021213_212035343
H1_mix_00004693	chr1	-	565	1	FSM	ENSG00000220749.4	ENST00000401418.2	483	1	0	-82	0	82	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTTCATATCCAACAAAAA	39	False	NA	NA	False	AAAAAG	-1	NA	212052006	212051441	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_212051400_212052000
H1_mix_00004695	chr1	-	2469	8	FSM	ENSG00000065600.13	ENST00000261455.9	2469	8	0	0	0	0	multi-exon	TRUE	canonical	3	98	junction_2	17.8279761805393	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCCCTGCCACTTTTCTG	-17	True	NA	NA	False	ATTAAA	-20	NA	212414886	212363927	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_212365377_212375192_212375301_212377561_212377707_212379894_212380038_212385273_212385426_212386890_212387101_212410424_212410522_212414721
H1_mix_00004696	chr1	-	1287	1	FSM	ENSG00000260805.2	ENST00000564287.2	1899	1	612	0	612	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTGTCATTTTCCTTTG	NA	False	NA	-8	True	AATAAA	-43	NA	212559119	212557832	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_212557800_212559100
H1_mix_00004700	chr1	-	631	3	FSM	ENSG00000117697.15	ENST00000487995.1	685	3	0	54	0	-54	multi-exon	FALSE	canonical	3	430	junction_1	7.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAGTATAGTCATACTATA	-2	True	NA	83	True	NA	NA	NA	212791782	212784194	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_212784494_212787558_212787638_212791529
H1_mix_00004702	chr1	-	2027	2	FSM	ENSG00000198468.10	ENST00000426161.7	942	2	55	-1140	0	5	multi-exon	FALSE	canonical	3	70	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATACTGAATTACCGTGA	8	True	NA	NA	False	AATAAA	-21	NA	212858083	212855463	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_212857173_212857765
H1_mix_00004703	chr1	-	482	2	Intergenic	novelGene_143	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	1033	junction_1	0	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGGTCTTATGTTAAATA	NA	False	NA	NA	False	NA	NA	NA	212914683	212910009	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_-_212910193_212914384
H1_mix_00004705	chr1	-	7211	5	NNC	ENSG00000174606.14	novel	4323	8	NA	NA	-2637	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	146.351247005278	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGCCTGAAGGTTTT	NA	False	NA	-12	True	AATAAA	-15	NA	213004871	212992181	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_212995193_212997154_212997319_213000325_213000384_213000785_213000913_213001020
H1_mix_00004706	chr1	-	4703	9	NIC	ENSG00000174606.14	novel	4690	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	106	junction_8	80.0546688207502	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGCCTGAAGGTTTT	-21	True	NA	-12	True	AATAAA	-15	NA	213015493	212992181	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_212995193_212997154_212997319_213000325_213000384_213000785_213000913_213005032_213005455_213007128_213007199_213008209_213008467_213013092_213013419_213015225
H1_mix_00004707	chr1	-	4323	8	FSM	ENSG00000174606.14	ENST00000360506.6	4323	8	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_7	100.802089385537	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGCCTGAAGGTTTT	32	False	NA	-12	True	AATAAA	-15	NA	213015826	212992181	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_212995193_212997154_212997319_213000325_213000384_213000785_213000913_213005032_213005455_213007128_213007199_213008209_213008467_213015612
H1_mix_00004710	chr1	-	7719	3	ISM	ENSG00000174606.14	ENST00000473303.1	2135	4	-2635	-2547	-2635	0	intron_retention	FALSE	canonical	3	357	junction_2	4	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGCCTGAAGGTTTT	NA	False	NA	-12	True	AATAAA	-15	NA	213004869	212992181	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_212995193_212997154_212997319_213000325
H1_mix_00004712	chr1	-	1243	3	FSM	ENSG00000174606.14	ENST00000460337.5	1243	3	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_2	22	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGGTCCCATATACTTG	2440	False	NA	-13	True	AATAAA	-20	NA	213013418	213006538	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_213007199_213008209_213008467_213013092
H1_mix_00004713	chr1	-	1292	4	ISM	ENSG00000174606.14	ENST00000366962.8	4690	9	189	14374	148	-17	5prime_fragment	FALSE	canonical	3	87	junction_3	64.3134684356412	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCTAGAAACAAGTTATCT	180	False	NA	-30	True	AATAAA	-3	NA	213015678	213006555	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_213007199_213008209_213008467_213013092_213013419_213015612
H1_mix_00004714	chr1	-	13588	19	FSM	ENSG00000152104.12	ENST00000366956.10	13360	19	-220	-8	-220	8	multi-exon	FALSE	canonical	3	34	junction_8	9.8124385662935	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTTTTCTGTACTGTAT	NA	False	NA	3	True	AATAAA	-27	NA	214551822	214348691	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_214358051_214364511_214364676_214369456_214369692_214372710_214372840_214376218_214376438_214377958_214378103_214383310_214384789_214386843_214386923_214390987_214391046_214393694_214393778_214394898_214394987_214397912_214398002_214401684_214401773_214402882_214402954_214411683_214411752_214414628_214414727_214451804_214451975_214464629_214464958_214551182
H1_mix_00004715	chr1	-	13018	20	NNC	ENSG00000152104.12	novel	13360	19	NA	NA	-220	8	at_least_one_novel_splicesite	FALSE	non_canonical	1	14	junction_1	12.3723398047325	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTTTTCTGTACTGTAT	NA	False	NA	3	True	AATAAA	-27	NA	214551822	214348691	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_214350687_214351256_214358051_214364511_214364676_214369456_214369692_214372710_214372840_214376218_214376438_214377958_214378103_214383310_214384789_214386843_214386923_214390987_214391046_214393694_214393778_214394898_214394987_214397912_214398002_214401684_214401773_214402882_214402954_214411683_214411752_214414628_214414727_214451804_214451975_214464629_214464958_214551182
H1_mix_00004716	chr1	-	736	1	FSM	ENSG00000213036.3	ENST00000432577.1	575	1	-29	-132	-29	132	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATAGAAGTTGTGTAAAA	7696	False	NA	NA	False	AATAGA	-45	NA	214483416	214482680	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_214482700_214483400
H1_mix_00004717	chr1	-	5554	2	FSM	ENSG00000152104.12	ENST00000491277.1	5552	2	0	-2	0	2	multi-exon	FALSE	canonical	2	2	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATAGTGTCTTTTTTTCT	-16	True	NA	NA	False	AATAAA	-21	NA	214551602	214528273	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_214533408_214551182
H1_mix_00004718	chr1	-	1126	2	FSM	ENSG00000250536.1	ENST00000503096.1	1137	2	11	0	11	0	multi-exon	FALSE	canonical	3	81	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGATTTAAAATTTAAAAAAA	NA	False	NA	NA	False	AAGAAA	-22	NA	214608829	214605469	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_214606080_214608313
H1_mix_00004720	chr1	-	241	2	Intergenic	novelGene_155	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGACTTTCACGAGGTAA	NA	False	NA	NA	False	NA	NA	NA	216152679	216145801	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_-_216145905_216152541
H1_mix_00004722	chr1	-	5858	10	FSM	ENSG00000092978.11	ENST00000366935.8	5859	10	0	1	0	-1	multi-exon	FALSE	canonical	3	14	junction_3	21.6715094303017	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGAGTAAAGTTGTCAAAA	-21	True	NA	NA	False	ATTAAA	-21	NA	217631090	217426992	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_217431366_217449248_217449338_217491679_217491751_217498355_217498396_217514821_217514890_217610320_217610401_217610888_217611072_217614140_217614203_217619782_217620500_217630915
H1_mix_00004723	chr1	-	3219	6	FSM	ENSG00000092978.11	ENST00000366934.3	3218	6	0	-1	0	1	multi-exon	FALSE	canonical	3	46	junction_1	11.7200682591869	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCCAATTTGTGCTGCTA	-13	True	NA	-6	True	AATAAA	-28	NA	217631082	217608182	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_217610193_217610320_217610401_217610888_217611072_217614140_217614203_217619782_217620500_217630915
H1_mix_00004725	chr1	-	4862	32	FSM	ENSG00000136628.18	ENST00000366923.8	4862	32	0	0	0	0	multi-exon	FALSE	canonical	3	586	junction_18	108.138231959092	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTTTTGTATTCATTT	181	False	220046529	-16	True	AATAAA	-14	NA	220046505	219968599	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_219968957_219969057_219969123_219972068_219972148_219973237_219973399_219978545_219978720_219979417_219979616_219980084_219980241_219980755_219980858_219981377_219981458_219982771_219982845_219983188_219983399_219984205_219984258_219987141_219987405_219988589_219988824_219996982_219997343_220001137_220001256_220005247_220005361_220006105_220006314_220007201_220007339_220010945_220011057_220018448_220018509_220018994_220019080_220019987_220020222_220022346_220022519_220024263_220024457_220025131_220025259_220030385_220030481_220032386_220032527_220033501_220033659_220034913_220035014_220040184_220040270_220046342
H1_mix_00004726	chr1	-	2382	9	FSM	ENSG00000162813.18	ENST00000322067.12	2400	9	0	18	0	-16	multi-exon	FALSE	canonical	3	37	junction_3	6.79038842777054	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTGTTTTCAAATCAACA	14	True	NA	30	True	ATTAAA	-3	NA	220089788	220057499	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_220058993_220059685_220059792_220062756_220062955_220067301_220067394_220069383_220069433_220072849_220072958_220073966_220074072_220079726_220079855_220089685
H1_mix_00004727	chr1	-	1067	10	ISM	ENSG00000162813.18	ENST00000354807.7	1152	11	22	1091	-17	-1091	5prime_fragment	FALSE	canonical	1	3	junction_4	20.5372290676658	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGGTGGCTCATGCCTGTA	52	False	NA	NA	False	ATTAAA	-41	NA	220089750	220058821	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_220058993_220059685_220059792_220062756_220062955_220066072_220066118_220067301_220067394_220069383_220069433_220072849_220072958_220073966_220074072_220079726_220079855_220089685
H1_mix_00004728	chr1	-	418	1	FSM	ENSG00000232134.1	ENST00000419498.1	388	1	31	-61	31	61	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCCAATTCTCTTCTTAA	NA	False	NA	NA	False	AATAAA	-28	NA	220144320	220143902	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_220143900_220144300
H1_mix_00004729	chr1	-	7256	35	FSM	ENSG00000118873.17	ENST00000358951.7	7256	35	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	36.7521390286796	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTTTCCTAAACATTCA	-7	True	NA	-41	True	AATAAA	-14	NA	220272453	220148292	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_220151407_220151605_220151765_220153184_220153407_220153967_220154058_220157269_220157489_220157801_220157877_220159385_220159422_220162197_220162269_220164732_220164800_220167292_220167400_220167501_220167676_220170891_220171121_220171888_220172050_220172636_220172743_220182256_220182355_220182717_220182932_220184035_220184164_220185650_220185742_220189702_220189768_220190063_220190147_220190376_220190521_220191067_220191285_220193239_220193380_220195077_220195168_220195297_220195378_220196249_220196399_220202275_220202375_220205906_220206007_220210387_220210490_220210800_220210877_220210954_220211003_220212886_220212969_220213855_220213980_220232798_220232864_220272222
H1_mix_00004731	chr1	-	1906	2	FSM	ENSG00000118873.17	ENST00000462353.1	1906	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGAAGTCTGGTCTTAC	7	True	NA	-18	True	AGTAAA	-15	NA	220272361	220265984	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_220267752_220272222
H1_mix_00004732	chr1	-	1692	3	NNC	ENSG00000143507.18	novel	1625	3	NA	NA	-937	-9	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	4	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACTGGTTTAGGATGTG	767	False	NA	-25	True	TATAAA	-1	NA	221743026	221701432	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_221702678_221706094_221706467_221742951
H1_mix_00004733	chr1	-	965	2	ISM	ENSG00000143507.18	ENST00000366899.4	2589	4	0	37508	0	-36505	5prime_fragment	FALSE	canonical	3	17	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCCCCTGCTCCCTTCCC	-3	True	NA	NA	False	NA	NA	NA	221742089	221738931	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_221739788_221741980
H1_mix_00004734	chr1	-	1648	11	FSM	ENSG00000143498.18	ENST00000366890.5	1648	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	35.2369124640625	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1	True	NA	NA	False	NA	NA	NA	222589785	222557901	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_222558269_222558622_222558773_222561363_222561519_222563172_222563297_222564058_222564126_222569509_222569669_222570534_222570666_222577444_222577644_222579758_222579873_222588442_222588566_222589726
H1_mix_00004735	chr1	-	1907	11	FSM	ENSG00000143498.18	ENST00000352967.9	1910	11	3	0	3	0	multi-exon	FALSE	canonical	3	45	junction_8	19.29144888286	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTATATTCTACTTTT	-10	True	NA	-4	True	AATAAA	-24	NA	222589930	222558311	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_222558773_222561363_222561519_222563172_222563297_222564058_222564126_222569509_222569669_222570534_222570666_222577444_222577644_222579758_222579873_222584127_222584298_222588442_222588566_222589726
H1_mix_00004738	chr1	-	3341	1	FSM	ENSG00000272750.1	ENST00000608771.1	2646	1	-743	48	-743	-48	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAACCACTTATTTATGC	2941	False	NA	NA	False	NA	NA	NA	222662255	222658914	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_222658900_222662300
H1_mix_00004740	chr1	-	4050	10	FSM	ENSG00000186063.13	ENST00000474863.5	4050	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	167.616478756169	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGTGTGATTAACTTAAC	494	False	NA	0	True	ATTAAA	-16	NA	222712737	222668012	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_222669990_222670132_222670251_222673312_222673436_222676095_222676219_222686929_222687037_222687594_222687659_222693788_222693844_222694209_222694264_222703147_222703218_222711378
H1_mix_00004741	chr1	-	2986	9	FSM	ENSG00000143502.16	ENST00000366878.9	2989	9	0	3	0	-3	multi-exon	FALSE	canonical	1	3	junction_2	4.30116263352131	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGACAGTTTGAAGCGTG	-7	True	NA	NA	False	ATTAAA	-11	NA	223364176	223220833	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_223222221_223223248_223223632_223227593_223227739_223229196_223229389_223264629_223264819_223268501_223268676_223292438_223292652_223363277_223363461_223364056
H1_mix_00004745	chr1	-	4747	19	FSM	ENSG00000143514.17	ENST00000391878.6	4741	19	0	-6	0	0	multi-exon	FALSE	canonical	3	20	junction_16	75.3032757144955	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAGCCTACTTTACATTT	14	True	NA	-14	True	AATAAA	-22	NA	223845930	223779892	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_223780895_223784114_223784315_223789007_223789175_223792388_223792523_223793302_223793441_223795814_223796591_223798214_223798678_223799898_223800048_223800699_223800811_223802115_223802345_223802730_223802896_223803270_223803453_223804173_223804349_223806845_223806948_223810430_223810514_223814239_223814354_223818205_223818338_223821219_223821368_223845653
H1_mix_00004746	chr1	-	4528	17	NIC	ENSG00000143514.17	novel	4632	18	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_16	59.0771476545711	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAGCCTACTTTACATTT	-47	True	NA	-14	True	AATAAA	-22	NA	223845991	223779892	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_223780895_223784114_223784315_223789007_223789175_223792388_223792523_223793302_223793441_223795814_223796591_223798214_223798678_223799898_223800048_223800699_223800811_223802115_223802345_223802730_223802896_223803270_223803453_223804173_223804349_223806845_223806948_223810430_223810514_223814239_223814354_223845653
H1_mix_00004749	chr1	-	1113	7	NNC	ENSG00000272645.4	novel	407	5	NA	NA	1556	-10973	intron_retention	FALSE	canonical	2	3	junction_1	16.820126832657	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTAAACTTTTGAGTAGT	5985	False	NA	NA	False	NA	NA	NA	223986598	223962451	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_223962569_223964455_223964540_223973981_223974047_223976879_223977116_223982757_223983286_223984381_223984441_223986574
H1_mix_00004751	chr1	-	2989	23	FSM	ENSG00000143748.18	ENST00000281701.11	2897	23	51	-143	0	132	multi-exon	FALSE	canonical	3	209	junction_14	43.6341145253714	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATCAAAGTCAGGGAATT	41	False	NA	NA	False	NA	NA	NA	224330121	224227201	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_224227671_224231225_224231297_224233200_224233290_224236505_224236583_224250211_224250319_224268033_224268134_224275338_224275459_224281122_224281186_224286025_224286131_224287774_224287994_224289483_224289734_224294266_224294412_224296500_224296619_224300561_224300664_224303722_224303858_224304735_224304813_224305033_224305167_224307990_224308264_224311799_224311858_224317693_224317794_224317877_224317931_224326390_224326465_224330070
H1_mix_00004752	chr1	-	652	5	FSM	ENSG00000143748.18	ENST00000483094.5	652	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	123.974543757983	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAAAGTTACAGAGATCT	NA	False	NA	-1	True	AATAAA	-29	NA	224236582	224227333	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_224227671_224231225_224231297_224232894_224232973_224233200_224233290_224236505
H1_mix_00004753	chr1	-	2995	24	FSM	ENSG00000143748.18	ENST00000482491.5	3003	24	0	8	0	0	multi-exon	FALSE	canonical	3	25	junction_14	76.4299350493288	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTGACTATACAGAAAAGT	-27	True	NA	-12	True	AATAAA	-43	NA	224330189	224227344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_224227671_224231225_224231297_224233200_224233290_224236505_224236583_224250211_224250319_224268033_224268134_224275338_224275459_224281122_224281186_224286025_224286131_224287774_224287994_224289483_224289734_224294266_224294412_224296500_224296619_224300561_224300664_224301690_224301772_224303722_224303858_224304735_224304813_224305033_224305167_224307990_224308264_224311799_224311858_224317693_224317794_224317877_224317931_224326390_224326465_224330070
H1_mix_00004758	chr1	-	7329	14	FSM	ENSG00000162923.17	ENST00000651911.2	6502	14	-808	-19	-6	4	multi-exon	FALSE	canonical	3	21	junction_11	20.3513516699235	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTGTGTTACATCTCC	-17	True	NA	NA	False	AATAAA	-22	NA	224434803	224385141	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_224389861_224393827_224394014_224398096_224398227_224398514_224398594_224398888_224399035_224400949_224401070_224404429_224404571_224411426_224411566_224418259_224418417_224419517_224419616_224424517_224424655_224431524_224431582_224431681_224431782_224433683
H1_mix_00004759	chr1	-	7371	14	FSM	ENSG00000162923.17	ENST00000414423.9	7367	14	0	-4	0	4	multi-exon	FALSE	canonical	3	14	junction_11	21.2689177887669	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTGTGTTACATCTCC	-11	True	NA	NA	False	AATAAA	-22	NA	224434797	224385141	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_224389861_224393827_224394014_224398096_224398227_224398514_224398594_224398888_224399035_224400949_224401070_224404429_224404571_224411426_224411566_224418259_224418417_224419517_224419616_224424517_224424655_224431476_224431582_224431681_224431782_224433683
H1_mix_00004761	chr1	-	1555	3	Intergenic	novelGene_166	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	8	junction_1	12	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTAGTGGTCTCTTC	11	False	NA	1	True	AATAAA	-22	NA	224845775	224839966	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_-_224840338_224843637_224844582_224845535
H1_mix_00004766	chr1	-	6304	14	FSM	ENSG00000154380.18	ENST00000366843.7	13092	14	-1863	8651	-1844	0	multi-exon	FALSE	canonical	3	112	junction_3	137.350284279706	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	225654986	225495479	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_225497813_225498346_225498405_225500991_225501071_225507950_225508018_225511810_225511860_225512656_225512715_225512870_225513017_225514595_225514901_225517195_225517307_225519197_225519566_225530553_225530639_225554905_225555084_225567248_225567415_225652685
H1_mix_00004774	chr1	-	1628	4	FSM	ENSG00000243709.1	ENST00000272134.5	1626	4	0	-2	0	2	multi-exon	FALSE	canonical	3	924	junction_3	377.04936311075	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTAATTTTCTATTTT	-1	True	NA	-22	True	AATAAA	-40	NA	225889146	225886279	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_225887091_225887398_225887639_225887785_225888033_225888816
H1_mix_00004775	chr1	-	1681	7	FSM	ENSG00000143811.20	ENST00000343818.11	1680	7	0	-1	0	0	multi-exon	FALSE	canonical	0	0	junction_6	360.247445823315	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTTGTTAGGCTTAATC	27	True	NA	-2	True	AATAAA	-19	NA	225924250	225919876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_225920621_225921207_225921372_225921551_225921645_225921857_225922080_225922203_225922384_225923700_225923772_225924043
H1_mix_00004776	chr1	-	3150	5	FSM	ENSG00000143811.20	ENST00000478402.5	3149	5	0	-1	0	0	multi-exon	FALSE	canonical	0	0	junction_4	423.197575016682	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTTGTTAGGCTTAATC	-1	True	NA	-2	True	AATAAA	-19	NA	225924278	225919876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_225920621_225921207_225921372_225921551_225921645_225921857_225923772_225924043
H1_mix_00004781	chr1	-	2019	4	FSM	ENSG00000143768.13	ENST00000366820.10	2019	4	0	0	0	0	multi-exon	FALSE	canonical	3	2929	junction_2	117.533919454012	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTGTCTGTTTTTAATT	-1	True	NA	-13	True	AATAAA	-14	NA	225941220	225936602	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_225937805_225939360_225939601_225939755_225940003_225940890
H1_mix_00004782	chr1	-	3991	7	FSM	ENSG00000143751.10	ENST00000272091.8	3987	7	0	-4	0	4	multi-exon	FALSE	canonical	3	127	junction_1	13.3998341614945	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTCTAATATTCTTCAT	-2	True	NA	1	True	AATAAA	-27	NA	225999343	225982697	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_225985524_225987895_225988389_225991242_225991364_225992397_225992568_225992890_225993003_225995265_225995384_225999192
H1_mix_00004783	chr1	-	1039	3	FSM	ENSG00000272562.2	ENST00000658138.1	1264	3	104	121	82	-121	multi-exon	TRUE	canonical	2	3	junction_2	0.5	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTATCTGGTTGGAAATA	702	False	NA	NA	False	NA	NA	NA	226061794	226045681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_226046591_226060989_226061082_226061756
H1_mix_00004784	chr1	-	3584	8	FSM	ENSG00000182827.9	ENST00000366812.6	3584	8	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_5	38.3011695883655	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTGATGTTTCATTAAT	-24	True	NA	-4	True	ATTAAA	-15	NA	226186741	226144678	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_226146822_226152334_226152620_226154646_226154834_226159183_226159359_226161530_226161690_226164788_226164930_226165858_226166001_226186389
H1_mix_00004785	chr1	-	3985	15	FSM	ENSG00000183814.16	ENST00000328205.9	3567	15	-368	-50	-232	42	multi-exon	FALSE	canonical	3	78	junction_5	19.0430500472493	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGTTTTGAAGAATTG	NA	False	NA	49	True	NA	NA	NA	226310101	226231106	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_226232607_226233095_226233194_226233343_226233524_226238970_226239097_226250838_226250920_226265532_226265635_226266212_226266333_226267956_226268091_226277774_226277933_226286332_226286459_226287663_226287798_226295841_226295947_226297718_226297814_226301172_226301206_226309108
H1_mix_00004786	chr1	-	2909	14	FSM	ENSG00000183814.16	ENST00000460719.5	2909	14	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_11	30.0797755877314	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTTCATTTAATTCAA	-15	True	NA	7	True	AATAAA	-26	NA	226309172	226231148	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_226232607_226233095_226233194_226233343_226233524_226238970_226239097_226250838_226250920_226265532_226265635_226266212_226266333_226267956_226268091_226277774_226277933_226286332_226286459_226287663_226287798_226297718_226297814_226301172_226301206_226309108
H1_mix_00004787	chr1	-	2869	10	FSM	ENSG00000143799.14	ENST00000676565.1	3577	10	711	-3	711	0	multi-exon	FALSE	canonical	3	2342	junction_8	210.004232761575	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTATTTGTGTATTGCGT	NA	False	NA	-13	True	ATTAAA	-14	NA	226375356	226360696	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_226361542_226361968_226362084_226363098_226363161_226363942_226364071_226365001_226365155_226365953_226366053_226367479_226367609_226368198_226368322_226370433_226370518_226374225
H1_mix_00004788	chr1	-	3978	23	FSM	ENSG00000143799.14	ENST00000366794.10	3978	23	0	0	0	0	multi-exon	FALSE	canonical	3	2223	junction_17	275.455389287636	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTATTGCGTGTCTGG	-15	True	NA	-7	True	ATTAAA	-20	NA	226408093	226360690	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_226361542_226361968_226362084_226363098_226363161_226363942_226364071_226365001_226365155_226365953_226366053_226367479_226367609_226368198_226368322_226370433_226370518_226374225_226374355_226377107_226377304_226379141_226379275_226379572_226379642_226379921_226380165_226381067_226381209_226383035_226383184_226385503_226385681_226386325_226386443_226388655_226388756_226390409_226390625_226392198_226392315_226402213_226402380_226407809
H1_mix_00004791	chr1	-	6271	8	FSM	ENSG00000143772.11	ENST00000429204.6	6269	8	0	-2	0	2	multi-exon	FALSE	canonical	3	14	junction_5	5.3642809587196	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCTGTGGTGTGATCCT	22	True	NA	0	True	AATAAA	-16	NA	226739282	226631687	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_226634887_226637678_226637751_226639556_226639659_226641920_226642126_226647166_226647381_226648671_226648772_226735526_226737664_226739040
H1_mix_00004792	chr1	-	3163	3	FSM	ENSG00000143772.11	ENST00000366784.1	3146	3	0	-17	0	17	multi-exon	FALSE	canonical	1	1	junction_1	6.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTGGCAATAATGTTTT	-19	True	NA	NA	False	AATAAA	-33	NA	226739323	226707172	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_226707916_226735526_226737664_226739040
H1_mix_00004793	chr1	-	10618	37	FSM	ENSG00000143776.20	ENST00000366766.8	10978	37	367	-7	349	7	multi-exon	FALSE	canonical	3	9	junction_16	11.9662591491531	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATTTTGTCTCTTTTCCCC	1181	False	NA	1	True	AATAAA	-22	NA	227318125	226989857	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_226994400_226994822_226994981_227004993_227005112_227016079_227016198_227016926_227017051_227023262_227023348_227026054_227026153_227028656_227029251_227030407_227030471_227031297_227031515_227033333_227033416_227034654_227034795_227035470_227035608_227040130_227040237_227047926_227048011_227051880_227051986_227069776_227069854_227072207_227072300_227073863_227074013_227074258_227074365_227080892_227081018_227091885_227091992_227100991_227101240_227112311_227112423_227112670_227112914_227119803_227119938_227129108_227129232_227139575_227139743_227142944_227143025_227145488_227145738_227147358_227147560_227160542_227160637_227193785_227193935_227199556_227199653_227213135_227213220_227254063_227254156_227317004
H1_mix_00004794	chr1	-	9328	35	FSM	ENSG00000143776.20	ENST00000366767.7	9320	35	0	-8	0	8	multi-exon	FALSE	canonical	3	6	junction_23	11.8010101614417	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTCTCTTTTCCCCC	2124	False	NA	2	True	AATAAA	-23	NA	227317182	226989856	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_226994400_226994822_226994981_227004993_227005112_227016079_227016198_227016926_227017051_227023262_227023348_227026054_227026153_227028656_227029251_227030407_227030471_227031297_227031515_227033333_227033416_227034654_227034795_227035470_227035608_227040130_227040237_227047926_227048011_227069776_227069854_227072207_227072300_227073863_227074013_227074258_227074365_227080892_227081018_227091885_227091992_227100991_227101240_227112311_227112423_227119803_227119938_227129108_227129232_227139575_227139743_227142944_227143025_227145488_227145738_227147358_227147560_227160542_227160637_227193785_227193935_227199556_227199653_227213135_227213220_227254063_227254156_227317004
H1_mix_00004795	chr1	-	10943	36	FSM	ENSG00000143776.20	ENST00000366769.7	10855	36	-88	0	-70	0	multi-exon	FALSE	canonical	3	29	junction_10	9.82167532157569	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGAGTATTTTGTCTCT	744	False	NA	-6	True	AATAAA	-15	NA	227318562	226989864	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_226994400_226994822_226994981_227004993_227005112_227016079_227016198_227016926_227017051_227023262_227023348_227026054_227026153_227028656_227029251_227030407_227030471_227031297_227031515_227033333_227033416_227034654_227034795_227035470_227035608_227040130_227040237_227047926_227048011_227069776_227069854_227072207_227072300_227073863_227074013_227074258_227074365_227080892_227081018_227091885_227091992_227100991_227101240_227112311_227112423_227112670_227112914_227119803_227119938_227129108_227129232_227139575_227139743_227142944_227143025_227145488_227145738_227147358_227147560_227160542_227160637_227193785_227193935_227199556_227199653_227213135_227213220_227254063_227254156_227317004
H1_mix_00004797	chr1	-	2939	2	FSM	ENSG00000081692.13	ENST00000485807.1	3749	2	32	778	26	-12	multi-exon	TRUE	canonical	3	110	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTCCAGCCAACAGCTTTC	927	False	NA	-16	True	AATGAA	-3	NA	227734345	227731202	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_227732677_227732880
H1_mix_00004800	chr1	-	4005	4	FSM	ENSG00000143816.8	ENST00000272164.6	4005	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.942809041582063	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCATCTCAGTCTGCTGC	-1	True	NA	NA	False	AATAAA	-17	NA	227947932	227918655	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_227922001_227924137_227924401_227925262_227925520_227947792
H1_mix_00004801	chr1	-	1302	8	FSM	ENSG00000143793.13	ENST00000272139.5	1290	8	0	-12	0	7	multi-exon	FALSE	canonical	3	317	junction_5	28.4296482208131	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGGTCAGTATCAGGGG	-19	True	NA	4	True	AATAAA	-29	NA	228103325	228100718	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_228101255_228101338_228101474_228102079_228102166_228102309_228102383_228102477_228102561_228102642_228102689_228102898_228103050_228103133
H1_mix_00004802	chr1	-	2830	7	FSM	ENSG00000143793.13	ENST00000485896.5	1429	7	-1397	-4	694	-1	multi-exon	FALSE	canonical	3	317	junction_4	28.0322235214325	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAAATTGGAAGGTCAGT	4566	False	NA	-4	True	AATAAA	-21	NA	228104717	228100726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_228101255_228101338_228101474_228102079_228102383_228102477_228102561_228102642_228102689_228102898_228103050_228103133
H1_mix_00004803	chr1	-	838	4	FSM	ENSG00000162910.19	ENST00000366733.5	834	4	0	-4	0	4	multi-exon	FALSE	canonical	3	166	junction_3	277.995603482421	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGTCTCCCCACTTGG	539	False	NA	5	True	NA	NA	NA	228108744	228106674	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228108436
H1_mix_00004804	chr1	-	1216	3	FSM	ENSG00000162910.19	ENST00000366735.5	1212	3	0	-4	0	4	multi-exon	FALSE	canonical	3	724	junction_2	29.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGTCTCCCCACTTGG	279	False	NA	5	True	NA	NA	NA	228109004	228106674	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_228106919_228107667_228107870_228108234
H1_mix_00004805	chr1	-	665	4	FSM	ENSG00000162910.19	ENST00000348259.9	661	4	0	-4	0	4	multi-exon	FALSE	canonical	3	93	junction_3	312.292953633105	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGTCTCCCCACTTGG	0	True	NA	5	True	NA	NA	NA	228109283	228106674	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228109148
H1_mix_00004806	chr1	-	993	5	FSM	ENSG00000162910.19	ENST00000336520.8	738	5	21	-276	0	270	multi-exon	FALSE	canonical	3	365	junction_3	192.913678882551	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTCCTAGGAGGGGCTG	5	True	NA	NA	False	NA	NA	NA	228109278	228106408	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228108954_228109022_228109148
H1_mix_00004807	chr1	-	881	5	FSM	ENSG00000162910.19	ENST00000295008.8	632	5	21	-270	0	270	multi-exon	FALSE	canonical	3	184	junction_4	248.778013497978	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTCCTAGGAGGGGCTG	5	True	NA	NA	False	NA	NA	NA	228109278	228106408	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228108954_228109022_228109260
H1_mix_00004808	chr1	-	569	4	FSM	ENSG00000162910.19	ENST00000366746.7	565	4	0	-4	0	4	multi-exon	FALSE	canonical	3	27	junction_3	343.321359014489	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGTCTCCCCACTTGG	-16	True	NA	5	True	NA	NA	NA	228109299	228106674	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228109260
H1_mix_00004810	chr1	-	1427	6	FSM	ENSG00000162910.19	ENST00000366731.9	1423	6	0	-4	0	4	multi-exon	FALSE	canonical	2	4	junction_3	289.228352690396	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGTCTCCCCACTTGG	-16	True	NA	5	True	NA	NA	NA	228109299	228106674	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_228106919_228107667_228107870_228107976_228108138_228108234_228108319_228108436_228109022_228109148
H1_mix_00004811	chr1	-	726	5	FSM	ENSG00000162910.19	ENST00000336300.9	722	5	0	-4	0	4	multi-exon	FALSE	canonical	3	9	junction_4	338.238451391914	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGTCTCCCCACTTGG	-23	True	NA	5	True	NA	NA	NA	228109306	228106674	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228108436_228108475_228109148
H1_mix_00004812	chr1	-	760	6	NIC	ENSG00000162910.19	novel	738	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	108	junction_4	278.367670536648	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGTCTGTGTCTGTCT	0	True	NA	-5	True	NA	NA	NA	228109283	228106684	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_228106919_228107667_228107870_228108234_228108319_228108436_228108475_228108954_228109022_228109148
H1_mix_00004813	chr1	-	730	5	NIC	ENSG00000162910.19	novel	738	5	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_3	289.506908380439	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGTCTGTGTCTGTCT	-5	True	NA	-5	True	NA	NA	NA	228109288	228106684	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_228106919_228107667_228107870_228108234_228108322_228108954_228109022_228109148
H1_mix_00004818	chr1	-	2740	6	FSM	ENSG00000154370.16	ENST00000284551.11	2710	6	35	-65	0	62	multi-exon	FALSE	canonical	0	0	junction_4	36.8966123106174	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCCCAGGGAGGCTGTT	24	True	NA	60	True	NA	NA	NA	228406800	228393610	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_228395253_228396946_228397048_228397142_228397166_228400963_228401195_228402065_228402162_228406153
H1_mix_00004823	chr1	-	401	2	Intergenic	novelGene_170	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTGCAAGTCACAGGGGG	NA	False	NA	NA	False	NA	NA	NA	229180179	229174312	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_-_229174446_229179911
H1_mix_00004824	chr1	-	5966	2	FSM	ENSG00000177788.7	ENST00000660017.1	5952	2	0	-14	0	14	multi-exon	FALSE	canonical	3	9	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTTGCCTGTAATCCTA	NA	False	NA	3	True	AATAAA	-24	NA	229271242	229263928	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_229269628_229270975
H1_mix_00004826	chr1	-	5480	3	FSM	ENSG00000154429.11	ENST00000366687.5	5089	3	-78	-313	-78	313	multi-exon	FALSE	canonical	3	140	junction_2	8.5	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGAGGCAGGCAGATCACT	690	False	NA	NA	False	NA	NA	NA	229342595	229320697	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_229325412_229326737_229327007_229342098
H1_mix_00004828	chr1	-	5301	26	FSM	ENSG00000069248.12	ENST00000261396.6	5208	26	15	-108	0	108	multi-exon	FALSE	canonical	3	280	junction_19	35.3765119818221	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGCTGTGTTGACATTT	5	True	NA	NA	False	TATAAA	-21	NA	229508326	229440150	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_229442041_229444913_229445003_229449125_229449191_229450524_229450606_229452524_229452644_229458160_229458297_229460610_229460770_229463542_229463677_229464623_229464876_229465419_229465520_229466633_229466757_229470579_229470805_229475637_229475733_229477596_229477761_229484053_229484146_229486370_229486529_229487465_229487614_229489954_229490103_229495494_229495566_229495891_229496048_229498135_229498307_229499683_229499819_229500755_229500864_229501998_229502103_229506039_229506159_229508067
H1_mix_00004830	chr1	-	3122	5	FSM	ENSG00000135801.10	ENST00000258281.6	3112	5	0	-10	0	10	multi-exon	FALSE	canonical	3	14	junction_1	17.1955662890176	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGGCATCTCATTTCAT	53	False	NA	48	True	ATTAAA	-25	NA	229626047	229593110	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_229595095_229602194_229602920_229610105_229610211_229614340_229614486_229625884
H1_mix_00004831	chr1	-	4198	4	FSM	ENSG00000135801.10	ENST00000366675.3	4062	4	-136	0	-59	0	multi-exon	FALSE	canonical	3	49	junction_3	3.74165738677394	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCCTGTAGCTTCTGTTG	-6	True	NA	-9	True	AATAAA	-16	NA	229626106	229599193	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_229602920_229610105_229610211_229614340_229614486_229625884
H1_mix_00004832	chr1	-	10889	7	FSM	ENSG00000177614.11	ENST00000391860.7	10914	7	0	25	0	-25	multi-exon	FALSE	canonical	3	73	junction_6	6.66874967458085	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAAATACAGTCAAATAC	1	True	NA	NA	False	NA	NA	NA	230426332	230314514	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_230323621_230325309_230325416_230332843_230333042_230337107_230337289_230350957_230351093_230356893_230357322_230425597
H1_mix_00004834	chr1	-	3156	22	NIC	ENSG00000143643.13	novel	3276	23	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_17	14.4105655368889	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTATGTGTTTATTTTG	18	True	NA	-2	True	AATAAA	-41	NA	230978834	230906242	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_230907020_230908711_230908792_230908941_230909021_230911469_230911550_230912622_230912759_230916192_230916303_230920509_230920595_230921420_230921505_230923840_230923934_230924840_230924974_230925516_230925648_230928936_230929094_230931297_230931473_230931735_230931878_230933778_230933862_230939385_230939497_230940439_230940557_230945388_230945455_230954332_230954404_230958223_230958300_230961208_230961304_230978559
H1_mix_00004835	chr1	-	3112	21	FSM	ENSG00000143643.13	ENST00000366662.8	3112	21	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_17	15.9768582643773	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTATGTGTTTATTTTG	-7	True	NA	-2	True	AATAAA	-41	NA	230978859	230906242	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_230907020_230908711_230908792_230908941_230909021_230911469_230911550_230912622_230912759_230916192_230916300_230920509_230920595_230921420_230921505_230923840_230923934_230924840_230924974_230925516_230925648_230928936_230929094_230931297_230931473_230931735_230931878_230933778_230933862_230939385_230939497_230940439_230940557_230954332_230954404_230958223_230958300_230961208_230961304_230978559
H1_mix_00004837	chr1	-	1503	2	FSM	ENSG00000182118.8	ENST00000366654.5	1503	2	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCATGTGTTATTTTAT	-10	True	NA	-14	True	GATAAA	-14	NA	231040254	231018957	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_231020127_231039920
H1_mix_00004838	chr1	-	1434	7	FSM	ENSG00000143633.13	ENST00000366649.7	1430	7	0	-4	0	2	multi-exon	FALSE	canonical	3	120	junction_5	31.0129901098807	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTGTGACTGTTAAGTAA	-16	True	NA	-18	True	AATAAA	-19	NA	231241175	231223760	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_231224415_231225470_231225524_231226738_231226826_231226972_231227069_231229149_231229210_231238856_231239189_231241023
H1_mix_00004839	chr1	-	1434	7	FSM	ENSG00000143633.13	ENST00000366651.7	1432	7	0	-2	0	2	multi-exon	FALSE	canonical	3	115	junction_5	32.5149538246977	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTGTGACTGTTAAGTAA	-19	True	NA	-18	True	AATAAA	-19	NA	231241178	231223760	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_231224415_231225470_231225524_231226738_231226826_231226972_231227069_231229149_231229207_231238856_231239189_231241023
H1_mix_00004840	chr1	-	5822	1	FSM	ENSG00000116903.7	ENST00000366645.1	5100	1	-682	-40	-682	40	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGGTATTCAATATTTTT	NA	False	NA	-1	True	GATAAA	-37	NA	231338534	231332712	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_231332700_231338500
H1_mix_00004842	chr1	-	2129	3	FSM	ENSG00000233461.6	ENST00000654602.1	2172	3	1	42	1	-42	multi-exon	FALSE	canonical	3	55	junction_1	7.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATCAAAATTATAAAAGTAT	-21	True	NA	NA	False	NA	NA	NA	231528603	231520770	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_231522638_231527337_231527416_231528419
H1_mix_00004843	chr1	-	410	2	Intergenic	novelGene_173	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCCTGGCTAATTTCTT	NA	False	NA	NA	False	NA	NA	NA	232123904	232118114	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_-_232118300_232123679
H1_mix_00004844	chr1	-	6913	23	FSM	ENSG00000116991.12	ENST00000675407.1	6912	23	0	-1	0	0	multi-exon	FALSE	canonical	2	6	junction_21	22.7074913913725	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTGTCAGGTGACTAG	18	False	NA	NA	False	AATAAA	-27	NA	232630109	232397964	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_232399274_232402391_232402474_232403447_232403572_232415493_232415626_232425588_232425809_232428410_232428565_232432246_232432472_232439107_232439497_232441290_232441395_232441767_232441869_232443601_232443686_232445528_232445787_232460886_232461162_232464839_232465417_232471370_232471529_232479626_232479731_232483791_232483967_232490873_232491063_232493526_232493661_232513856_232515609_232574173_232574223_232608911_232608989_232629868
H1_mix_00004846	chr1	-	6841	22	NIC	ENSG00000116991.12	novel	6914	23	NA	NA	-4	1	combination_of_known_junctions	TRUE	canonical	3	33	junction_21	15.3664239212311	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTTGTCAGGTGACTAGA	14	True	NA	NA	False	AATAAA	-28	NA	232630113	232397963	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_232399274_232402391_232402474_232403447_232403572_232415493_232415626_232425588_232425809_232428410_232428565_232432246_232432472_232439107_232439497_232441290_232441395_232441767_232441869_232443601_232443686_232445528_232445787_232460886_232461162_232464839_232465417_232471370_232471529_232479626_232479731_232483791_232483967_232490873_232491063_232493526_232493661_232513856_232515609_232574173_232574223_232629868
H1_mix_00004848	chr1	-	7530	34	FSM	ENSG00000135749.19	ENST00000258229.14	7530	34	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_13	24.448442781773	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGCGTCCAGTGTTTTG	2	True	NA	-6	True	ATTAAA	-14	NA	233295725	232983434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_232984478_232986091_232986541_232998250_232998439_232999104_232999380_233000304_233000536_233001536_233001682_233014664_233014778_233016920_233017155_233025145_233025400_233054267_233054484_233057231_233057291_233090060_233090191_233095754_233095864_233135012_233135191_233139713_233139856_233160282_233160434_233161270_233161364_233177801_233177899_233179065_233179176_233198938_233199031_233200153_233200265_233208517_233208690_233217898_233217932_233218030_233218185_233227225_233227372_233236844_233236981_233250738_233250833_233252353_233252500_233252640_233252789_233258027_233259345_233261284_233261322_233262044_233262166_233262957_233263164_233295325
H1_mix_00004849	chr1	-	598	2	FSM	ENSG00000135749.19	ENST00000496675.1	598	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	232985884	232984134	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_232984478_232985629
H1_mix_00004851	chr1	-	3665	18	ISM	ENSG00000135749.19	ENST00000258229.14	7530	34	116551	2165	0	-1463	internal_fragment	FALSE	canonical	0	0	junction_12	24.0355849223719	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACTTCACCCAAATAAGC	NA	False	NA	NA	False	TTTAAA	-22	NA	233179174	232985599	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_232986541_232998250_232998439_232999104_232999380_233000304_233000536_233001536_233001682_233014664_233014778_233016920_233017155_233025145_233025400_233054267_233054484_233057231_233057291_233090060_233090191_233095754_233095864_233135012_233135191_233139713_233139856_233160282_233160434_233161270_233161364_233177801_233177899_233179065
H1_mix_00004852	chr1	-	4539	22	ISM	ENSG00000135749.19	ENST00000258229.14	7530	34	0	111974	0	-3	5prime_fragment	FALSE	canonical	0	0	junction_1	18.5326824140575	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTGTGGATAGGTTTAAT	2	True	NA	-9	True	AATAAA	-15	NA	233295725	233095408	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_233095864_233135012_233135191_233139713_233139856_233160282_233160434_233161270_233161364_233177801_233177899_233179065_233179176_233198938_233199031_233200153_233200265_233208517_233208690_233217898_233217932_233218030_233218185_233227225_233227372_233236844_233236981_233250738_233250833_233252353_233252500_233252640_233252789_233258027_233259345_233261284_233261322_233262044_233262166_233262957_233263164_233295325
H1_mix_00004860	chr1	-	8672	31	NNC	ENSG00000059588.10	novel	5206	30	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_8	37.2458051329274	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCTTTAATAAACACTTTT	-9	True	NA	-32	True	NA	NA	NA	234479172	234391409	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_234391746_234392415_234392553_234393361_234393487_234393645_234393838_234398381_234398554_234400852_234400949_234401180_234401263_234405902_234409574_234410444_234410532_234418083_234418234_234420701_234420813_234425672_234425794_234427316_234427389_234427575_234427767_234429135_234429325_234429415_234429678_234430086_234430302_234433409_234433572_234437274_234437373_234446802_234446976_234448479_234448580_234450427_234450567_234457666_234457757_234459229_234459327_234460260_234460397_234463836_234463935_234465655_234465709_234467501_234467651_234471187_234471258_234472713_234472812_234478172
H1_mix_00004864	chr1	-	5255	2	FSM	ENSG00000168264.11	ENST00000366610.7	4615	2	-640	0	13	0	multi-exon	FALSE	canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTCTGAGGCCTTTTTT	2611	False	NA	-7	True	AATAAA	-22	NA	234610165	234604268	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_234607853_234608494
H1_mix_00004865	chr1	-	5324	2	FSM	ENSG00000168264.11	ENST00000366609.4	5316	2	-4	-4	-4	4	multi-exon	FALSE	canonical	3	56	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAGGCCTTTTTTAATT	-3	True	NA	-3	True	AATAAA	-26	NA	234610182	234604264	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_234607853_234608446
H1_mix_00004871	chr1	-	1881	3	FSM	ENSG00000188739.15	ENST00000495224.1	549	3	-866	-466	-866	0	multi-exon	FALSE	canonical	3	763	junction_2	23	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGTGTGTGCTCAAGTTC	7515	False	NA	0	True	ATTAAA	-19	NA	235136980	235131182	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_235131998_235135651_235135771_235136033
H1_mix_00004872	chr1	-	1291	10	FSM	ENSG00000188739.15	ENST00000447801.5	1273	10	0	-18	0	0	multi-exon	FALSE	canonical	3	48	junction_6	235.194482172615	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCATCGTCTGCTATTCAT	36	True	NA	-18	True	AATAAA	-19	NA	235161220	235131648	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_235131998_235135651_235135771_235136033_235136074_235137876_235137941_235138090_235138175_235148403_235148448_235154880_235155113_235160510_235160648_235160892_235161068_235161173
H1_mix_00004873	chr1	-	1317	11	NNC	ENSG00000188739.15	novel	1847	11	NA	NA	0	-25	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_2	224.416042207325	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGCTGAGTACTGCTA	24	True	NA	7	True	AAGAAA	-40	NA	235161232	235131691	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_235131998_235135651_235135768_235136033_235136074_235137876_235137941_235138090_235138175_235148403_235148448_235152705_235152766_235154880_235155113_235160510_235160648_235160892_235161068_235161173
H1_mix_00004875	chr1	-	5832	23	FSM	ENSG00000054267.22	ENST00000349213.7	5811	23	0	-21	0	21	multi-exon	FALSE	canonical	3	30	junction_7	27.5841312627507	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTTTAGTTCATTTCTG	568	False	NA	5	True	NA	NA	NA	235328219	235166873	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_235168653_235172617_235172765_235175183_235175400_235177799_235177914_235181584_235182794_235194012_235194212_235196030_235196116_235219792_235219969_235220301_235220546_235221564_235221663_235223165_235223261_235224702_235224776_235229230_235229386_235231112_235231190_235234412_235234493_235240312_235240452_235246419_235246512_235252729_235252810_235255659_235255751_235257159_235257226_235260641_235260753_235326913_235326969_235327768
H1_mix_00004876	chr1	-	6119	25	NIC	ENSG00000054267.22	novel	6022	24	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_5	37.2152149291418	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGATTTTTGTTTCTAA	9	True	NA	-23	True	AATAAA	-18	NA	235328162	235166901	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_235168653_235172617_235172765_235175183_235175400_235177799_235177914_235181070_235181185_235181584_235182794_235194012_235194212_235196030_235196116_235213768_235214027_235219792_235219969_235220301_235220546_235221564_235221663_235223165_235223261_235224702_235224776_235229230_235229386_235231112_235231190_235234412_235234493_235240312_235240452_235246419_235246512_235252729_235252810_235255659_235255751_235257159_235257226_235260641_235260753_235326913_235326969_235327768
H1_mix_00004877	chr1	-	6011	24	FSM	ENSG00000054267.22	ENST00000264183.9	6022	24	11	0	0	0	multi-exon	FALSE	canonical	3	84	junction_7	21.5281940254221	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGATTTTTGTTTCTAA	3	True	NA	-23	True	AATAAA	-18	NA	235328168	235166901	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_235168653_235172617_235172765_235175183_235175400_235177799_235177914_235181584_235182794_235194012_235194212_235196030_235196116_235213768_235214027_235219792_235219969_235220301_235220546_235221564_235221663_235223165_235223261_235224702_235224776_235229230_235229386_235231112_235231190_235234412_235234493_235240312_235240452_235246419_235246512_235252729_235252810_235255659_235255751_235257159_235257226_235260641_235260753_235326913_235326969_235327768
H1_mix_00004880	chr1	-	1693	13	NIC	ENSG00000162885.14	novel	3862	14	NA	NA	9	-1145	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	75.7555920194821	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCTTCTCCTCAGTATT	38	False	NA	NA	False	NA	NA	NA	235504413	235450299	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_235450341_235453089_235453147_235454155_235454316_235455558_235455685_235458602_235458787_235465635_235465715_235470849_235470961_235480053_235480150_235484321_235484516_235489167_235489269_235494680_235494829_235496185_235496309_235504140
H1_mix_00004882	chr1	-	315	4	FSM	ENSG00000162885.14	ENST00000462374.1	315	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	97.2191110613317	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGAAAGTGGCAGGAGTTG	NA	False	NA	NA	False	NA	NA	NA	235470930	235454286	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_235454316_235455558_235455685_235465635_235465715_235470849
H1_mix_00004883	chr1	-	1203	8	NIC	ENSG00000162885.14	novel	4719	12	NA	NA	6	-1200	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	73.8625308894012	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTGAAAATGTGG	35	True	NA	NA	False	AATAAA	-13	NA	235504416	235455486	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_235455685_235465635_235465715_235470849_235470961_235480053_235480150_235484321_235484516_235489167_235489269_235494680_235494829_235504140
H1_mix_00004884	chr1	-	1874	8	FSM	ENSG00000162885.14	ENST00000313984.3	1874	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	91.7643388117139	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGGTGTAAATTGT	29	True	NA	NA	False	AATAAA	-26	NA	235504422	235464895	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_235465715_235470849_235470961_235480053_235480150_235484321_235484516_235489167_235489269_235494680_235494829_235496185_235496309_235504140
H1_mix_00004885	chr1	-	1869	4	FSM	ENSG00000162885.14	ENST00000494378.1	1869	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	105.085150658354	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAGGAAAATGCAGA	26	True	NA	NA	False	AATAAA	-22	NA	235504425	235478907	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_235480150_235484321_235484516_235494680_235494829_235504140
H1_mix_00004888	chr1	-	5798	20	FSM	ENSG00000116962.15	ENST00000264187.7	5792	20	0	-6	0	6	multi-exon	FALSE	canonical	3	113	junction_17	17.9984609991507	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATCTTTTCTGAATGAAG	0	True	NA	-3	True	AATAAA	-26	NA	236065090	235975823	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_235977989_235978994_235979108_235979821_235979946_235980495_235980654_235981610_235981783_235985378_235985506_235990885_235991059_235993644_235993873_236011920_236012044_236013410_236013561_236017147_236017274_236024069_236024214_236025895_236026142_236029549_236029751_236032400_236032653_236038103_236038254_236041909_236042293_236045456_236045684_236048689_236048990_236064854
H1_mix_00004889	chr1	-	4994	16	FSM	ENSG00000086619.15	ENST00000354619.10	4994	16	0	0	0	0	multi-exon	TRUE	canonical	2	11	junction_11	7.03009404078083	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATCTTATTTAATTTTTT	0	True	NA	NA	False	ATTAAA	-45	NA	236281958	236215100	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_236218577_236220831_236220966_236221923_236222011_236225069_236225140_236226268_236226516_236226646_236226740_236230223_236230251_236232827_236232840_236235788_236235836_236236277_236236399_236243421_236243496_236249884_236249968_236252049_236252092_236253421_236253506_236269874_236269995_236281681
H1_mix_00004891	chr1	-	8459	45	FSM	ENSG00000119285.11	ENST00000366582.8	8459	45	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_32	55.9406415041947	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATCTTGCCTCTTCCTGA	-9	True	NA	-19	True	CATAAA	-17	NA	236604516	236549004	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_236550991_236551998_236552108_236553580_236553740_236554597_236554753_236555295_236555465_236555550_236555656_236555804_236555940_236556099_236556259_236557194_236557346_236558236_236558530_236558994_236559136_236559713_236559838_236561224_236561272_236564497_236564662_236565918_236566046_236566645_236566877_236568995_236569125_236571350_236571473_236571567_236571687_236572410_236572555_236572724_236572829_236574201_236574334_236574660_236574904_236576218_236576378_236576779_236576950_236581221_236581415_236582735_236582873_236583012_236583197_236585024_236585217_236585819_236585942_236586240_236586453_236587401_236587491_236587947_236588044_236590846_236590955_236591992_236592111_236592522_236592634_236594011_236594115_236595539_236595674_236595832_236596045_236596835_236596977_236597877_236597980_236599482_236599625_236603159_236603377_236603953_236604128_236604421
H1_mix_00004893	chr1	-	1411	1	FSM	ENSG00000215808.4	ENST00000649681.1	5583	1	4073	99	4073	-99	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATGTGTTACAAATATAT	4082	False	NA	NA	False	NA	NA	NA	238481950	238480539	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_238480500_238482000
H1_mix_00004894	chr1	-	4158	2	FSM	ENSG00000180875.5	ENST00000318160.5	4176	2	6	12	6	-12	multi-exon	TRUE	canonical	3	15	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCAGCCTAAGATGTCTT	5	True	NA	NA	False	AATAAA	-20	NA	240612149	240489584	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_240493477_240611883
H1_mix_00004895	chr1	-	2386	17	FSM	ENSG00000182901.18	ENST00000366564.5	2295	17	-90	-1	-22	0	multi-exon	FALSE	canonical	1	2	junction_11	5.39675828623073	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTTGTAACTTTTGAC	20	True	NA	-10	True	ATTAAA	-16	NA	241357175	240775513	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_240776214_240802903_240802994_240806139_240806327_240811917_240812044_240813617_240813729_240814715_240814778_240816316_240816416_240827097_240827173_240868586_240868669_240868775_240868853_240870054_240870120_240930716_240930769_240936599_240936707_240983078_240983130_241098665_241098763_241355698_241355827_241356898
H1_mix_00004897	chr1	-	1852	10	FSM	ENSG00000091483.8	ENST00000366560.4	1791	10	0	-61	0	-31	multi-exon	FALSE	canonical	3	422	junction_5	67.6550801975965	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGACTTCATAAGTTAC	-22	True	NA	45	True	NA	NA	NA	241519755	241497541	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_241497971_241500436_241500591_241502442_241502571_241504041_241504246_241506002_241506169_241508602_241508786_241511966_241512144_241513602_241513714_241517181_241517317_241519590
H1_mix_00004899	chr1	-	3174	9	FSM	ENSG00000091483.8	ENST00000683521.1	3166	9	14	-22	0	22	multi-exon	FALSE	canonical	3	422	junction_4	44.9742982157587	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	NA	False	NA	NA	False	NA	NA	NA	241519785	241498715	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_241500591_241502442_241502571_241504041_241504246_241506002_241506169_241508602_241508786_241511966_241512144_241513602_241513714_241517181_241517317_241519590
H1_mix_00004900	chr1	-	351	2	FSM	ENSG00000091483.8	ENST00000497042.1	351	2	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTAATGGATAAGGCTT	6057	False	NA	NA	False	AAAACA	-30	NA	241513676	241511866	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_241512144_241513602
H1_mix_00004901	chr1	-	3450	4	NIC	ENSG00000054277.14	novel	1961	4	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	80.7478929893667	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGGATAAAGGTCGATGG	818	False	NA	NA	False	NA	NA	NA	241640340	241590103	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_241590161_241592009_241594692_241597745_241597998_241639881
H1_mix_00004902	chr1	-	2628	4	FSM	ENSG00000054277.14	ENST00000366554.3	2628	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	64.0954149859584	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAGTATGATATTAATAGC	-8	True	NA	NA	False	AATAAA	-19	NA	241640369	241593123	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_241594692_241597745_241597998_241604259_241604580_241639881
H1_mix_00004903	chr1	-	1816	3	FSM	ENSG00000054277.14	ENST00000490673.5	1816	3	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_2	37.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCTTTTGTTATAGGGG	6	True	NA	0	True	AATAAA	-26	NA	241640355	241593601	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_241594692_241597745_241597998_241639881
H1_mix_00004904	chr1	-	7711	2	FSM	ENSG00000203668.3	ENST00000366553.3	7711	2	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	0	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGTGAGAAAATTACTGAT	-8	True	NA	-8	True	AATAAA	-36	NA	241640369	241628850	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_241636074_241639881
H1_mix_00004906	chr1	-	1522	4	FSM	ENSG00000197769.6	ENST00000357246.4	1207	4	-16	-299	-16	299	multi-exon	FALSE	canonical	3	20	junction_2	2.05480466765633	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCTTTATTCTTTGGCTT	NA	False	NA	-2	True	AATAAA	-17	NA	241999114	241995190	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_241996386_241998513_241998621_241998775_241998832_241998950
H1_mix_00004907	chr1	-	8555	10	FSM	ENSG00000180287.17	ENST00000536534.7	8900	10	36	309	10	-309	multi-exon	FALSE	canonical	3	15	junction_9	2.83278861866266	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGATGGTACCTGGCCCC	33	False	NA	NA	False	AATGAA	-25	NA	242524661	242083294	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_242090111_242100667_242100783_242107670_242107840_242113889_242114027_242124467_242124666_242219987_242220116_242265336_242265449_242288361_242288531_242348105_242348243_242524087
H1_mix_00004909	chr1	-	7008	20	NNC	ENSG00000143702.16	novel	7059	20	NA	NA	0	0	intron_retention	FALSE	non_canonical	2	49	junction_5	44.1256704452609	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATGATTGTATATTTTA	501	False	243255332	-9	True	AATAAA	-18	NA	243255281	243124427	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_243126739_243128248_243128301_243129359_243129454_243136142_243136232_243139936_243140108_243142366_243142464_243156220_243156456_243164283_243166117_243169627_243169755_243172696_243172847_243185778_243186073_243186258_243186423_243191017_243191495_243199059_243199195_243200517_243200681_243200776_243200833_243211882_243211965_243221723_243221814_243225175_243225322_243255039
H1_mix_00004910	chr1	-	6737	19	NIC	ENSG00000143702.16	novel	6805	19	NA	NA	1	0	intron_retention	TRUE	canonical	0	0	junction_15	65.2490953534564	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATGATTGTATATTTTA	-1	True	NA	-9	True	AATAAA	-18	NA	243255230	243124427	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_243126739_243128248_243128301_243129359_243129454_243136142_243136232_243139936_243140108_243142285_243142464_243156220_243156456_243164283_243166117_243169627_243169755_243172696_243172847_243186258_243186423_243191017_243191495_243199059_243199195_243200517_243200681_243200776_243200836_243211885_243211965_243221723_243221814_243225175_243225322_243255046
H1_mix_00004912	chr1	-	6753	19	NNC	ENSG00000143702.16	novel	6805	19	NA	NA	12	0	intron_retention	FALSE	non_canonical	2	41	junction_5	51.9787765330865	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATGATTGTATATTTTA	-40	True	NA	-9	True	AATAAA	-18	NA	243255269	243124427	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_243126739_243128248_243128301_243129359_243129454_243136142_243136232_243139936_243140108_243142315_243142464_243156220_243156456_243164283_243166117_243169627_243169755_243172696_243172847_243186258_243186423_243191017_243191495_243199059_243199195_243200517_243200681_243200776_243200833_243211882_243211965_243221723_243221814_243225175_243225322_243255039
H1_mix_00004913	chr1	-	7059	20	FSM	ENSG00000143702.16	ENST00000366542.6	7059	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	57.4557037615661	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATGATTGTATATTTTA	501	False	243255332	-9	True	AATAAA	-18	NA	243255281	243124427	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_243126739_243128248_243128301_243129359_243129454_243136142_243136232_243139936_243140108_243142315_243142464_243156220_243156456_243164283_243166117_243169627_243169755_243172696_243172847_243185778_243186073_243186258_243186423_243191017_243191495_243199059_243199195_243200517_243200681_243200776_243200836_243211885_243211965_243221723_243221814_243225175_243225322_243255039
H1_mix_00004915	chr1	-	6727	19	FSM	ENSG00000143702.16	ENST00000366543.5	6727	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	65.3233410726127	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATGATTGTATATTTTA	11	True	NA	-9	True	AATAAA	-18	NA	243255321	243124427	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_243126739_243128248_243128301_243129359_243129454_243136142_243136232_243139936_243140108_243142285_243142464_243156220_243156348_243164283_243166117_243169627_243169755_243172696_243172847_243186258_243186423_243191017_243191495_243199059_243199195_243200517_243200681_243200776_243200836_243211885_243211965_243221723_243221814_243225175_243225322_243255039
H1_mix_00004923	chr1	-	1266	1	Genic_Genomic	ENSG00000117020.19	novel	NA	NA	NA	NA	-801	-114951	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCCCCGCGGCGACGGCG	NA	False	NA	NA	False	NA	NA	NA	243851880	243850614	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_-_243850600_243851900
H1_mix_00004924	chr1	-	512	1	FSM	ENSG00000225401.2	ENST00000435390.2	685	1	244	-71	244	71	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGGTTTTCTGTGGATCA	NA	False	NA	NA	False	NA	NA	NA	244395416	244394904	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_244394900_244395400
H1_mix_00004927	chr1	-	13084	16	FSM	ENSG00000153187.20	ENST00000649899.1	13084	16	0	0	0	0	multi-exon	FALSE	canonical	2	39	junction_1	1628.93058852187	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAATGTGACTTGGTTCA	11	True	NA	-55	True	NA	NA	NA	244864531	244840686	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_244843182_244845246_244845345_244846603_244854504_244854972_244855045_244855423_244855609_244855903_244856159_244856456_244856626_244856727_244856857_244857597_244857718_244858010_244858275_244858728_244858842_244859274_244859375_244860334_244860475_244862460_244862535_244862618_244862731_244863673
H1_mix_00004928	chr1	-	6867	14	FSM	ENSG00000153187.20	ENST00000640218.2	6867	14	0	0	0	0	multi-exon	FALSE	canonical	2	1162	junction_13	1091.4602454765	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTTGGAGTGACCTTT	-1	True	NA	-3	True	ATTAAA	-19	NA	244864543	244850296	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_244854504_244854972_244855045_244855423_244855609_244855903_244856159_244856456_244856626_244856727_244856857_244857597_244857718_244858010_244858275_244858728_244858842_244859274_244859375_244860334_244860475_244862460_244862535_244862618_244862731_244863616
H1_mix_00004929	chr1	-	6827	14	FSM	ENSG00000153187.20	ENST00000444376.7	6827	14	0	0	0	0	multi-exon	FALSE	canonical	2	3117	junction_4	695.053673803294	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTTGGAGTGACCTTT	9	False	NA	-3	True	ATTAAA	-19	NA	244864560	244850296	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_244854504_244854972_244855045_244855423_244855609_244855903_244856159_244856456_244856626_244856727_244856857_244857597_244857718_244858010_244858275_244858728_244858842_244859274_244859375_244860334_244860475_244862460_244862535_244862618_244862731_244863673
H1_mix_00004931	chr1	-	3207	13	FSM	ENSG00000153187.20	ENST00000440865.2	3207	13	0	0	0	0	multi-exon	FALSE	canonical	2	3117	junction_4	639.755829073353	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGAATTCATTTTACT	1463	False	NA	-41	True	AAGAAA	-37	NA	244863106	244853405	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_244854504_244854972_244855045_244855423_244855609_244855903_244856159_244856456_244856626_244856727_244856857_244857597_244857718_244858010_244858275_244858728_244858842_244859274_244859375_244860334_244860475_244862460_244862535_244862618
H1_mix_00004932	chr1	-	5678	13	FSM	ENSG00000153187.20	ENST00000638952.1	5678	13	0	0	0	0	multi-exon	FALSE	canonical	2	1162	junction_12	1132.98347541152	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCTTTTTCTTTCTAA	4	True	NA	-6	True	NA	NA	NA	244864538	244853466	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_244854504_244854972_244855045_244855423_244855609_244855903_244856159_244856456_244856626_244856727_244856857_244857597_244857718_244858010_244858275_244858728_244858842_244859274_244859375_244860334_244862535_244862618_244862731_244863616
H1_mix_00004933	chr1	-	5273	3	FSM	ENSG00000153187.20	ENST00000468690.2	5273	3	0	0	0	0	multi-exon	FALSE	canonical	3	4154	junction_2	528	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAAATGTGACTTTTTTT	4551	False	NA	-27	True	NA	NA	NA	244860018	244854189	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_244856626_244856727_244858275_244858728
H1_mix_00004938	chr1	-	1589	12	FSM	ENSG00000185420.19	ENST00000490107.6	1565	12	0	-24	0	19	multi-exon	FALSE	canonical	0	0	junction_2	63.1366090707973	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTACTCATTGGCGATTTT	-6	True	NA	6	True	AAAACA	-37	NA	246507279	245749322	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_245749665_245764040_245764150_245858495_245858671_245863798_245863887_245915529_245915641_245927930_245928034_245929869_245929938_246327200_246327338_246330479_246330538_246335366_246335475_246355030_246355095_246507053
H1_mix_00004941	chr1	-	308	1	FSM	ENSG00000228879.1	ENST00000413092.1	322	1	191	-177	191	177	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTGAGTTTCCACATACA	NA	False	NA	NA	False	NA	NA	NA	246755641	246755333	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_246755300_246755600
H1_mix_00004942	chr1	-	8910	36	FSM	ENSG00000153207.16	ENST00000366508.5	8751	36	-144	-15	-83	15	multi-exon	TRUE	canonical	3	24	junction_35	41.9746668010745	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAGGATAGCGCATGAAT	482	False	NA	1	True	AATAAA	-33	NA	246931507	246839082	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_246840999_246842693_246842777_246843794_246843929_246849614_246851443_246853090_246853300_246855729_246855828_246857690_246857815_246860898_246861296_246861958_246862154_246863923_246864117_246867243_246867352_246867660_246867812_246876036_246876188_246876949_246877082_246877157_246877303_246885492_246885681_246887210_246887358_246888176_246888234_246888393_246888518_246889965_246890060_246890955_246891061_246891778_246891920_246894658_246894749_246895834_246895926_246898207_246898337_246899450_246899513_246900064_246900247_246900336_246900470_246902524_246902676_246903948_246904034_246905540_246905658_246907550_246907759_246913231_246913413_246916141_246916396_246918249_246918378_246931128
H1_mix_00004945	chr1	-	1089	6	FSM	ENSG00000197472.15	ENST00000479214.5	885	6	57	-261	0	261	multi-exon	FALSE	canonical	3	20	junction_1	46.7563899376331	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCAGCTACTTGGGAGGC	55	False	NA	NA	False	AATAAA	-40	NA	247007999	246945285	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_246945828_246967694_246967793_246988120_246988256_246999347_246999441_246999947_247000075_247007905
H1_mix_00004946	chr1	-	664	5	ISM	ENSG00000197472.15	ENST00000366504.6	862	6	-47	22112	10	17662	5prime_fragment	FALSE	canonical	3	69	junction_1	30.4712979703852	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTCAGGTGGTTCTT	8	True	NA	NA	False	ATTAAA	-21	NA	247008046	246967660	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_246967793_246988120_246988256_246999347_246999441_246999911_247000075_247007905
H1_mix_00004947	chr1	-	3341	4	FSM	ENSG00000197472.15	ENST00000339986.8	3341	4	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_2	19.4307888557196	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGTGTATTTCTGAATCT	-3	True	NA	NA	False	AATAAA	-24	NA	247008057	246985322	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_246988256_246999347_246999441_246999911_247000075_247007905
H1_mix_00004948	chr1	-	5157	4	FSM	ENSG00000277462.2	ENST00000366503.3	4197	4	0	-960	0	960	multi-exon	FALSE	canonical	3	152	junction_1	24.589970855344	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTCTCTCTCATCATAC	0	True	NA	2	True	AATAAA	-26	NA	247078811	247033676	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_247038428_247038809_247038871_247039410_247039538_247078593
H1_mix_00004949	chr1	-	1706	4	FSM	ENSG00000188295.15	ENST00000448299.7	1706	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	6.84754619472471	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTGGCACATTGCAGTT	-12	True	NA	-9	True	AATAAA	-22	NA	247104356	247099961	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_247101320_247101730_247101792_247101986_247102114_247104196
H1_mix_00004951	chr1	-	2239	4	FSM	ENSG00000196418.13	ENST00000472531.5	2243	4	0	4	0	-4	multi-exon	FALSE	canonical	1	3	junction_1	60.8166643829359	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATATCAGCTATCCTTAT	9	False	NA	NA	False	AATAAA	-12	NA	247172005	247121978	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_247123872_247159005_247159067_247159686_247159814_247171847
H1_mix_00004952	chr1	-	963	4	FSM	ENSG00000196418.13	ENST00000491356.5	956	4	0	-7	0	7	multi-exon	FALSE	canonical	3	7	junction_1	58.9764548122573	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGAATGATTTATATTCC	12	False	NA	-5	True	AATAAA	-24	NA	247172002	247138137	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_247138758_247159005_247159067_247159686_247159814_247171847
H1_mix_00004954	chr1	-	2776	4	FSM	ENSG00000196418.13	ENST00000543802.3	2776	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	46.6499970227461	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTTTCCTGCTGTTCAT	-6	True	NA	-31	True	AATAAA	-19	NA	247172020	247154988	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_247157404_247159005_247159067_247159686_247159814_247171847
H1_mix_00004955	chr1	-	2895	4	FSM	ENSG00000196418.13	ENST00000340684.10	1674	4	14	-1235	0	323	multi-exon	FALSE	canonical	3	53	junction_1	38.1342657228669	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTTGGTAATGAAGTGTA	12	False	NA	NA	False	AAAACA	-27	NA	247172002	247154665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_247157218_247159005_247159067_247159686_247159814_247171847
H1_mix_00004957	chr1	-	427	1	FSM	ENSG00000215795.2	ENST00000400933.2	1670	1	596	647	596	-647	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCAGTGACAGGCCTGT	4889	False	NA	NA	False	NA	NA	NA	247184886	247184459	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_247184500_247184900
H1_mix_00004958	chr1	-	2660	1	FSM	ENSG00000259865.1	ENST00000566446.1	1246	1	-1268	-146	-1268	146	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCACCCCATCTCCTAG	NA	False	NA	68	True	NA	NA	NA	247189794	247187134	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_247187100_247189800
H1_mix_00004961	chr1	-	4610	11	NIC	ENSG00000162714.13	novel	5315	10	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	3	16	junction_4	98.3648819447266	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACGGTTGAGGCTTTTAC	12	True	NA	-56	True	AATAAA	-29	NA	247331844	247298204	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_247301277_247308474_247308589_247309698_247309807_247310323_247310457_247322697_247322806_247323153_247323231_247328682_247328867_247329188_247329616_247329965_247330082_247331431_247331648_247331789
H1_mix_00004963	chr1	-	907	5	FSM	ENSG00000162714.13	ENST00000477903.1	907	5	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	90.2496537389479	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGGCTCCCAAGCAGACCA	11	True	NA	NA	False	NA	NA	NA	247331845	247328727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_247328867_247329188_247329569_247329965_247330082_247331431_247331648_247331789
H1_mix_00004964	chr1	-	386	3	FSM	ENSG00000196772.5	ENST00000641093.1	1367	3	-10	991	-10	-991	multi-exon	FALSE	canonical	1	2	junction_1	0	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTTCTTGTTGATTTAT	NA	False	NA	NA	False	AATAAA	-23	NA	247824129	247815650	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_247815745_247819062_247819178_247823952
H1_mix_00004970	chr1	-	1031	2	FSM	ENSG00000171163.16	ENST00000497847.1	1031	2	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCGAGAGTGCAGCCTGG	54	False	NA	NA	False	NA	NA	NA	248859066	248857439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_248858322_248858917
H1_mix_00004974	chr1	+	931	1	Intergenic	novelGene_6	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCTTCAGGAAGCTAAGC	NA	False	NA	NA	False	NA	NA	NA	8807239	8808170	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_8807200_8808200
H1_mix_00004975	chr1	+	712	1	Intergenic	novelGene_9	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	19130538	19131250	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_19130500_19131200
H1_mix_00004977	chr1	+	943	1	Intergenic	novelGene_12	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAAAAGCCACGTTGCATA	1893	False	NA	NA	False	NA	NA	NA	21429886	21430829	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_21429900_21430800
H1_mix_00004979	chr1	+	1226	1	Intergenic	novelGene_17	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1155	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGACCCCAGGTTCCCAC	9881	False	NA	NA	False	NA	NA	NA	26708266	26709492	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_26708300_26709500
H1_mix_00004980	chr1	+	303	1	Intergenic	novelGene_19	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTTTGCATCGTGGTC	NA	False	NA	NA	False	AAAAAG	-2	NA	27321447	27321750	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_27321400_27321800
H1_mix_00004981	chr1	+	313	1	Intergenic	novelGene_21	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGACTCTTAACATCGC	NA	False	NA	NA	False	NA	NA	NA	30717641	30717954	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_30717600_30718000
H1_mix_00004982	chr1	+	596	1	Intergenic	novelGene_23	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGTTTAGTAAATTATT	7430	False	NA	NA	False	AATAAA	-33	NA	31376895	31377491	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_31376900_31377500
H1_mix_00004983	chr1	+	272	1	Intergenic	novelGene_25	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1424	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTATAAATGCCCTACTC	NA	False	NA	NA	False	NA	NA	NA	32436850	32437122	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_32436800_32437100
H1_mix_00004985	chr1	+	311	1	Intergenic	novelGene_36	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	228	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAATGGTCTTTTCTTGA	NA	False	NA	NA	False	NA	NA	NA	44390842	44391153	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_44390800_44391200
H1_mix_00004986	chr1	+	1511	1	Intergenic	novelGene_42	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCCCACAATTACCGTTG	NA	False	NA	NA	False	NA	NA	NA	55024898	55026409	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_55024900_55026400
H1_mix_00004988	chr1	+	277	1	Intergenic	novelGene_45	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCGCCTGGCCGGAAGTG	NA	False	NA	NA	False	NA	NA	NA	61057624	61057901	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_61057600_61057900
H1_mix_00004989	chr1	+	298	1	Intergenic	novelGene_47	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	265	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATATAACAGCAAAGCACT	NA	False	NA	NA	False	NA	NA	NA	62326195	62326493	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_62326200_62326500
H1_mix_00004991	chr1	+	1773	1	Intergenic	novelGene_48	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGGGGAAACGGGGTGA	NA	False	NA	NA	False	AATAAA	-37	NA	64349980	64351753	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_64350000_64351800
H1_mix_00004993	chr1	+	1704	1	Intergenic	novelGene_51	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCCGCAGAGATGCAGATC	7210	False	NA	NA	False	AAAAAG	-13	NA	65048330	65050034	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_65048300_65050000
H1_mix_00004994	chr1	+	1568	1	Intergenic	novelGene_53	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAGCAAGCCTAGAGAAAA	NA	False	NA	NA	False	NA	NA	NA	65644805	65646373	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_65644800_65646400
H1_mix_00004996	chr1	+	263	1	Intergenic	novelGene_55	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCAGATGGCCTGAAGTAA	235	False	NA	NA	False	NA	NA	NA	68391356	68391619	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_68391400_68391600
H1_mix_00004997	chr1	+	299	1	Intergenic	novelGene_58	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCCACTCCGAGTCACGG	NA	False	NA	NA	False	NA	NA	NA	72984712	72985011	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_72984700_72985000
H1_mix_00004998	chr1	+	399	1	Intergenic	novelGene_60	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTTTAATCTTTTTAAAG	NA	False	NA	NA	False	TTTAAA	-30	NA	72990118	72990517	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_72990100_72990500
H1_mix_00005000	chr1	+	1172	1	Intergenic	novelGene_66	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATGATGCTACTTTTAG	NA	False	NA	NA	False	NA	NA	NA	77627901	77629073	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_77627900_77629100
H1_mix_00005001	chr1	+	267	1	Intergenic	novelGene_67	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGCAGGTGGGGGAGGGC	NA	False	NA	NA	False	AGTAAA	-4	NA	79492207	79492474	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_79492200_79492500
H1_mix_00005002	chr1	+	584	1	Intergenic	novelGene_74	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACGTGGGTGTATAATCA	NA	False	NA	NA	False	NA	NA	NA	82071755	82072339	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_82071800_82072300
H1_mix_00005003	chr1	+	316	1	Intergenic	novelGene_77	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACAGGTGTACAGCCCCA	NA	False	NA	NA	False	NA	NA	NA	91387224	91387540	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_91387200_91387500
H1_mix_00005005	chr1	+	272	1	Intergenic	novelGene_80	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTTGGACTGACCCTGA	NA	False	NA	NA	False	NA	NA	NA	99512653	99512925	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_99512700_99512900
H1_mix_00005006	chr1	+	1055	1	Intergenic	novelGene_83	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTCTACCAAAAATACAAAAC	NA	False	NA	NA	False	NA	NA	NA	110359280	110360335	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_110359300_110360300
H1_mix_00005007	chr1	+	2184	1	Intergenic	novelGene_84	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCCTGAATCTTACAAGAT	NA	False	NA	NA	False	AAAAAG	-16	NA	112592059	112594243	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_112592100_112594200
H1_mix_00005008	chr1	+	236	1	Intergenic	novelGene_86	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGCATGGTAGCTCATT	NA	False	NA	NA	False	NA	NA	NA	112806705	112806941	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_112806700_112806900
H1_mix_00005009	chr1	+	1392	1	Intergenic	novelGene_88	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTCATCTTGTCCTCAG	6448	False	NA	NA	False	AAGAAA	-45	NA	113456117	113457509	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_113456100_113457500
H1_mix_00005010	chr1	+	641	1	Intergenic	novelGene_89	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATTATCTTTTCATAGAA	NA	False	NA	NA	False	NA	NA	NA	113509351	113509992	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_113509400_113510000
H1_mix_00005012	chr1	+	404	1	Intergenic	novelGene_94	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAATAGAAAAAGCTGATT	NA	False	NA	NA	False	GATAAA	-16	NA	117777411	117777815	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_117777400_117777800
H1_mix_00005013	chr1	+	288	1	Intergenic	novelGene_98	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATAAAAAGTCTTTCTTGA	NA	False	NA	NA	False	NA	NA	NA	144547432	144547720	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_144547400_144547700
H1_mix_00005016	chr1	+	284	1	Intergenic	novelGene_104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTTTTTATCTAAAGGGA	NA	False	NA	NA	False	NA	NA	NA	146386265	146386549	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_146386300_146386500
H1_mix_00005017	chr1	+	3236	1	Genic_Genomic	ENSG00000286219.2	novel	NA	NA	NA	NA	62578	356	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGCATCTCACTTTAAT	NA	False	NA	NA	False	NA	NA	NA	149468953	149472189	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_+_149469000_149472200
H1_mix_00005018	chr1	+	312	1	Intergenic	novelGene_113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTCATCTTTCTTAAGC	3244	False	NA	NA	False	NA	NA	NA	155308055	155308367	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_155308100_155308400
H1_mix_00005020	chr1	+	3170	1	Intergenic	novelGene_115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTCTTTCTAGTACTA	NA	False	NA	NA	False	AATAAA	-44	NA	160985617	160988787	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_160985600_160988800
H1_mix_00005021	chr1	+	296	1	Intergenic	novelGene_116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAACTATTTAAGTTTTTA	4875	False	NA	NA	False	NA	NA	NA	161427104	161427400	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_161427100_161427400
H1_mix_00005022	chr1	+	303	1	Intergenic	novelGene_119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGAGTAACCTTTTTG	NA	False	NA	NA	False	NA	NA	NA	171292095	171292398	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_171292100_171292400
H1_mix_00005024	chr1	+	303	1	Intergenic	novelGene_122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTATCAGTTTTAAGGT	NA	False	NA	NA	False	NA	NA	NA	175832703	175833006	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_175832700_175833000
H1_mix_00005025	chr1	+	256	1	Intergenic	novelGene_123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAATCAGACTTGGCTTCT	NA	False	NA	NA	False	NA	NA	NA	182941845	182942101	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_182941800_182942100
H1_mix_00005026	chr1	+	597	1	Intergenic	novelGene_126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTCGGAATGCTACAGG	NA	False	NA	NA	False	NA	NA	NA	183617659	183618256	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_183617700_183618300
H1_mix_00005027	chr1	+	254	1	Intergenic	novelGene_127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCCCCGACACTTCAACA	NA	False	NA	NA	False	NA	NA	NA	183618625	183618879	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_183618600_183618900
H1_mix_00005028	chr1	+	765	1	Intergenic	novelGene_131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCATGGTGGTTCATG	NA	False	NA	NA	False	NA	NA	NA	196370484	196371249	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_196370500_196371200
H1_mix_00005030	chr1	+	231	1	Intergenic	novelGene_134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGAAAAGTCATTTAATT	NA	False	NA	64	True	NA	NA	NA	204506520	204506751	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_204506500_204506800
H1_mix_00005031	chr1	+	490	1	Intergenic	novelGene_137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAATGATGGAAGTCTGT	NA	False	NA	NA	False	AATAAA	-24	NA	205957922	205958412	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_205957900_205958400
H1_mix_00005032	chr1	+	924	1	Intergenic	novelGene_146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTCTTCCGTTCTGTCA	1831	False	NA	NA	False	NA	NA	NA	212912309	212913233	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_212912300_212913200
H1_mix_00005033	chr1	+	307	1	Intergenic	novelGene_149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTTGTATGTCTTGTGTG	NA	False	NA	NA	False	NA	NA	NA	213016472	213016779	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_213016500_213016800
H1_mix_00005034	chr1	+	293	1	Intergenic	novelGene_150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTAAGGAGATTCGGCAT	NA	False	NA	NA	False	TATAAA	-43	NA	215410627	215410920	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_215410600_215410900
H1_mix_00005035	chr1	+	388	1	Intergenic	novelGene_152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGGGTGGCAATGAGATA	NA	False	NA	NA	False	NA	NA	NA	215412450	215412838	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_215412400_215412800
H1_mix_00005036	chr1	+	238	1	Intergenic	novelGene_154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGTTCAGGCGTTTGGAAG	NA	False	NA	NA	False	NA	NA	NA	215413210	215413448	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_215413200_215413400
H1_mix_00005038	chr1	+	1648	1	Intergenic	novelGene_156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGTTCTAGATCTCAAACA	5574	False	NA	NA	False	NA	NA	NA	216147132	216148780	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_216147100_216148800
H1_mix_00005040	chr1	+	253	1	Intergenic	novelGene_160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGGTATAAAAGGTCTAAGA	NA	False	NA	NA	False	ACTAAA	-23	NA	221973580	221973833	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_221973600_221973800
H1_mix_00005042	chr1	+	280	1	Intergenic	novelGene_163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGGGTTGGTACTGAG	NA	False	NA	NA	False	NA	NA	NA	221976943	221977223	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_221976900_221977200
H1_mix_00005043	chr1	+	303	1	Intergenic	novelGene_164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAATTTATATTACAATT	NA	False	NA	NA	False	NA	NA	NA	224165097	224165400	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_224165100_224165400
H1_mix_00005044	chr1	+	216	1	Intergenic	novelGene_169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAGACACTTTAACTAAAG	NA	False	NA	NA	False	NA	NA	NA	228948780	228948996	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_228948800_228949000
H1_mix_00005046	chr1	+	215	1	Intergenic	novelGene_177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATAAGGTTTTGGATGAA	3460	False	NA	NA	False	AAGAAA	-32	NA	232230095	232230310	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_232230100_232230300
H1_mix_00005047	chr1	+	662	1	Intergenic	novelGene_179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGATACAAGAGGAGGAGT	5182	False	NA	NA	False	NA	NA	NA	232231817	232232479	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_232231800_232232500
H1_mix_00005048	chr1	+	337	1	Intergenic	novelGene_180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	216	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGACATACATCTTTCA	NA	False	NA	NA	False	NA	NA	NA	232424009	232424346	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_232424000_232424300
H1_mix_00005049	chr1	+	227	1	Intergenic	novelGene_182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTGCGTCCTCCTCTTG	NA	False	NA	NA	False	NA	NA	NA	241436594	241436821	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_241436600_241436800
H1_mix_00005051	chr1	+	2538	1	FSM	ENSG00000289234.1	ENST00000689922.1	2525	1	-8	-5	-8	5	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGATCGGTGTCATGAA	735	False	NA	145	True	AATAAA	-26	NA	247332045	247334583	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_247332000_247334600
H1_mix_00005052	chr1	+	1543	1	FSM	ENSG00000237973.1	ENST00000414273.1	1543	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAAAGGAAGGAATCGAA	2	True	NA	-78	True	CATAAA	-8	NA	631073	632616	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_631100_632600
H1_mix_00005053	chr1	+	2404	2	Genic_Genomic	ENSG00000237973.1_ENSG00000229344.1	novel	1543	1	NA	NA	0	14066	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11387	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAATCCAAATAAAAT	2	True	NA	NA	False	NA	NA	NA	631073	647504	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_+_633461_647487
H1_mix_00005055	chr1	+	1181	1	FSM	ENSG00000248527.1	ENST00000514057.1	681	1	46	-546	46	546	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGTTAAAATATTAGATATT	9	False	NA	NA	False	NA	NA	NA	633741	634922	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_633700_634900
H1_mix_00005056	chr1	+	396	3	FSM	ENSG00000228794.11	ENST00000667414.1	1752	3	0	1356	0	-1356	multi-exon	FALSE	canonical	3	35	junction_2	30.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTGGAGACATTGGGGC	799	False	NA	NA	False	NA	NA	NA	827634	847806	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_827776_829002_829105_847653
H1_mix_00005060	chr1	+	739	3	NNC	ENSG00000272438.1	novel	351	2	NA	NA	10241	2047	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	3	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCTCTGGGGAGCACAGT	NA	False	NA	NA	False	NA	NA	NA	915074	918023	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_915472_915749_915950_917881
H1_mix_00005065	chr1	+	2574	12	NIC	ENSG00000187961.15	novel	2567	12	NA	NA	44	-13	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	51.9969802047506	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGTTCCTCAGGCTGAG	26	True	NA	-4	True	AATAAA	-8	NA	960627	965706	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_960801_961292_961553_961628_961751_961825_962048_962354_962472_962703_962918_963031_963254_963336_963505_963919_964009_964106_964168_964348_964531_964962
H1_mix_00005067	chr1	+	1189	4	NIC	ENSG00000187961.15	novel	913	6	NA	NA	264	-4	combination_of_known_junctions	FALSE	canonical	3	86	junction_2	39.5333895446481	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGCTGAGCATCTCTCT	3214	False	NA	5	True	AATAAA	-17	NA	963815	965715	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_964009_964106_964168_964348_964531_964962
H1_mix_00005068	chr1	+	456	3	FSM	ENSG00000187583.11	ENST00000480267.1	464	3	4	4	4	-4	multi-exon	TRUE	canonical	1	2	junction_1	0	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCCACCCAGCCCGCGG	4381	False	NA	NA	False	GGGGCT	-22	NA	970878	971519	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_971007_971076_971209_971323
H1_mix_00005072	chr1	+	920	4	NIC	ENSG00000217801.11	novel	957	4	NA	NA	9	-3	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	0.942809041582063	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCTTCAGTCTCTTGCC	13	True	NA	11	True	NA	NA	NA	1059716	1066446	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_1059783_1060279_1060394_1063078_1063202_1065829
H1_mix_00005073	chr1	+	2704	1	FSM	ENSG00000272141.1	ENST00000606993.1	987	1	-1737	20	-1737	-20	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCAGTTCACGCACCCAT	2536	False	NA	-11	True	AATAAA	-2	NA	1167619	1170323	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_1167600_1170300
H1_mix_00005074	chr1	+	319	2	FSM	ENSG00000230415.1	ENST00000453732.1	389	2	39	31	39	-31	multi-exon	FALSE	canonical	2	2	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGACCAGCTCCTATGT	1217	False	NA	NA	False	AAAACA	-2	NA	1275275	1279362	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_1275300_1279067
H1_mix_00005075	chr1	+	924	7	FSM	ENSG00000162572.21	ENST00000379099.3	923	7	-1	0	-1	0	multi-exon	FALSE	canonical	1	1	junction_1	5.18812747209113	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGACAGAGGTGGGTGCAC	3106	False	NA	NA	False	GGGGCT	-15	NA	1287107	1290943	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_1287300_1287507_1287837_1287938_1288038_1290270_1290389_1290476_1290556_1290636_1290695_1290894
H1_mix_00005077	chr1	+	1098	2	NIC	ENSG00000179403.12	novel	4492	3	NA	NA	0	-719	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGTGGGTGATAATTGAGA	-14	True	NA	NA	False	NA	NA	NA	1435689	1440046	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_1435822_1439080
H1_mix_00005078	chr1	+	458	2	FSM	ENSG00000179403.12	ENST00000471398.1	458	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGACACCCACACTGGCCT	31	True	NA	NA	False	NA	NA	NA	1435734	1437177	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_1435822_1436806
H1_mix_00005079	chr1	+	316	4	NNC	ENSG00000215915.10	novel	3864	12	NA	NA	2161	-398	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_1	41.5076967427595	295	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTGTGCTTAGTGTAAG	2270	False	NA	NA	False	NA	NA	NA	1452074	1455504	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_1452123_1452364_1452435_1454344_1454501_1455462
H1_mix_00005080	chr1	+	292	3	ISM	ENSG00000215915.10	ENST00000378785.7	3864	12	6536	10888	-6258	3373	internal_fragment	FALSE	canonical	3	19	junction_2	80.5	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGTCACCCTTGGTTCCC	6420	False	NA	NA	False	NA	NA	NA	1456224	1459275	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_1456350_1457128_1457181_1459160
H1_mix_00005081	chr1	+	3358	16	NNC	ENSG00000160072.20	novel	4098	16	NA	NA	-9	4	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_2	155.485676367811	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTCTCTCTATTGACTGA	-16	True	NA	23	True	AATAAA	-22	NA	1471755	1496206	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_1472090_1477273_1477351_1477750_1478746_1479048_1479109_1480866_1480937_1482137_1482304_1482544_1482615_1485015_1485172_1485781_1485839_1486109_1486236_1486543_1486669_1487862_1487915_1489203_1489275_1490256_1490425_1490562_1490672_1495484
H1_mix_00005084	chr1	+	830	8	FSM	ENSG00000197785.14	ENST00000400830.4	830	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	214.224086376097	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACATTTAGGATATGCTCC	NA	False	NA	NA	False	NA	NA	NA	1523954	1534142	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_1523965_1524272_1524398_1525239_1525292_1526460_1526532_1527160_1527239_1527694_1527863_1529222_1529332_1533925
H1_mix_00005094	chr1	+	1188	3	ISM	ENSG00000189409.14	ENST00000489782.1	626	4	-476	36	0	0	intron_retention	FALSE	canonical	3	89	junction_1	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCGCCAGCAGCGCGTGCT	894	False	NA	NA	False	NA	NA	NA	1633202	1634568	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_1633913_1633988_1634100_1634201
H1_mix_00005095	chr1	+	1537	6	NNC	ENSG00000215914.4	novel	1017	7	NA	NA	0	131	intron_retention	TRUE	canonical	2	4	junction_5	32.8548322168901	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCTGCTTCCCCGCACAG	NA	False	NA	NA	False	GGGGCT	-5	NA	1699941	1701913	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_1700073_1700139_1700280_1700346_1701072_1701147_1701259_1701360_1701485_1701607
H1_mix_00005096	chr1	+	4565	1	Genic_Genomic	ENSG00000227775.3	novel	NA	NA	NA	NA	2770	45	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCATAATTGCAGTCCTA	NA	False	NA	NA	False	AAAAAG	-26	NA	1727384	1731949	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_+_1727400_1731900
H1_mix_00005097	chr1	+	2118	8	FSM	ENSG00000187730.9	ENST00000639777.1	2393	8	275	0	275	0	multi-exon	FALSE	canonical	2	4	junction_6	3.10365156891435	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATGAAATAAAGCCTTGG	5093	False	NA	-24	True	NA	NA	NA	2024544	2030712	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_2025055_2025333_2025402_2025517_2025739_2027576_2027660_2028154_2028293_2029110_2029267_2029550_2029763_2029982
H1_mix_00005098	chr1	+	5848	7	NIC	ENSG00000157933.10	novel	6083	7	NA	NA	241	0	combination_of_known_junctions	TRUE	canonical	1	3	junction_4	4.04145188432738	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCGGGACAGCTGTGCGTG	226	False	NA	10	True	AATAAA	-15	NA	2228559	2310213	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_2229736_2302977_2303104_2303284_2303401_2303839_2304109_2304292_2304586_2306019_2306251_2306576
H1_mix_00005099	chr1	+	5675	3	FSM	ENSG00000287356.1	ENST00000661319.1	5675	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGCCGATTCCTGTCACT	5091	False	NA	NA	False	CATAAA	-34	NA	2315039	2323085	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_2315999_2316391_2317012_2318989
H1_mix_00005102	chr1	+	589	2	FSM	ENSG00000157916.20	ENST00000462129.1	585	2	-4	0	-4	0	multi-exon	FALSE	canonical	3	1137	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCTTTTTAAAAAGGAGC	NA	False	NA	36	True	CATAAA	-25	NA	2401946	2403227	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_2402343_2403034
H1_mix_00005104	chr1	+	2833	7	FSM	ENSG00000157870.17	ENST00000444521.6	2827	7	-6	0	-6	0	multi-exon	FALSE	canonical	3	18	junction_3	150.135956904252	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTTGTGCTTTCTTCTT	222	False	NA	18	True	AATAAA	-18	NA	2586743	2591467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_2586949_2587090_2587296_2587740_2587793_2588335_2588454_2588549_2588626_2588921_2589041_2589409
H1_mix_00005105	chr1	+	589	6	FSM	ENSG00000157870.17	ENST00000465233.6	589	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	160.091223994321	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAGCACATCCTGCAGGT	25	True	NA	NA	False	NA	NA	NA	2586832	2588977	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_2586949_2587090_2587296_2587740_2587793_2588389_2588454_2588529_2588626_2588921
H1_mix_00005106	chr1	+	464	5	FSM	ENSG00000157870.17	ENST00000498083.2	464	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	178.107235956319	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTCCTGGGCATCTCTGC	69	False	NA	NA	False	NA	NA	NA	2586876	2588992	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_2586949_2587090_2587296_2587740_2587793_2588389_2588454_2588921
H1_mix_00005108	chr1	+	2839	15	NNC	ENSG00000130762.15	novel	2822	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	45.9562791339414	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGATTTTCACAGTGACT	-4	True	NA	40	True	ATTAAA	-16	NA	3454664	3481113	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_3454829_3463065_3463673_3466147_3466194_3467167_3467338_3468879_3468937_3469432_3469594_3473077_3473231_3473392_3473523_3474707_3474783_3475969_3476063_3477874_3478027_3478423_3478613_3479516_3479591_3479811_3479914_3480447
H1_mix_00005111	chr1	+	3213	14	NNC	ENSG00000078900.15	novel	1668	11	NA	NA	-7059	891	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_4	3.43321747760329	48	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTTAGTAGGCCCCGGGG	6231	False	NA	NA	False	NA	NA	NA	3675306	3734258	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_3675397_3682332_3682431_3683059_3683181_3707548_3707792_3722020_3722208_3723353_3723470_3727114_3727225_3727627_3727771_3728128_3728218_3729326_3729449_3729999_3730149_3730926_3731066_3731462_3731557_3732746
H1_mix_00005112	chr1	+	547	4	FSM	ENSG00000235169.11	ENST00000444870.7	547	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	26.6624996744283	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCCTTGTACACATGGAC	3	True	NA	58	True	GGGGCT	-34	NA	3772786	3775982	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_3772842_3773062_3773182_3775298_3775484_3775794
H1_mix_00005113	chr1	+	3098	8	FSM	ENSG00000169598.17	ENST00000491998.5	3152	8	54	0	54	0	multi-exon	FALSE	canonical	1	1	junction_7	19.0819927937203	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTCAAGAAAGTTTGCAC	58	False	NA	NA	False	AATAAA	-18	NA	3857334	3885429	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_3857718_3858717_3858845_3865811_3866001_3867973_3868054_3869604_3869776_3872471_3872573_3873013_3873138_3883506
H1_mix_00005114	chr1	+	2383	6	FSM	ENSG00000196581.11	ENST00000378190.7	2383	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	25.8797217913949	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGCCTTCCCACTTTG	101	False	NA	2	True	AATAAA	-14	NA	4654731	4777794	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_4655455_4711899_4712700_4769852_4769941_4772279_4772526_4774426_4774559_4777400
H1_mix_00005115	chr1	+	682	1	Intergenic	novelGene_4	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTAAAAAGATTAAAGCCT	NA	False	NA	NA	False	NA	NA	NA	5115450	5116132	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_5115400_5116100
H1_mix_00005116	chr1	+	1508	4	NIC	ENSG00000225077.3	novel	1138	5	NA	NA	-79	8	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	10.2740233382816	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TACAAAAATATAAGAAAAAA	NA	False	NA	-20	True	NA	NA	NA	6236160	6239416	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_6236337_6237244_6237346_6237813_6237849_6238220
H1_mix_00005118	chr1	+	2038	5	NNC	ENSG00000173673.8	novel	710	4	NA	NA	-1648	999	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	95.2129192914491	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTCTAATGTCTCCCAC	3774	False	NA	32	True	AATAAA	-40	NA	6242530	6246577	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_6242784_6244102_6244242_6244350_6244447_6244547_6244630_6245109
H1_mix_00005119	chr1	+	1494	7	FSM	ENSG00000187017.18	ENST00000633239.1	1494	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	18.6428419388128	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTCCGGTTCACTCACT	538	False	NA	9	True	ATTAAA	-12	NA	6449054	6460926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_6449092_6450443_6450471_6451602_6451749_6451832_6452097_6457183_6457264_6457360_6457373_6459998
H1_mix_00005120	chr1	+	1293	3	FSM	ENSG00000204859.13	ENST00000435905.5	1001	3	-8	-284	8	230	multi-exon	FALSE	canonical	3	33	junction_1	14.5	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTGTCAACAGGTTCCA	-5	True	NA	NA	False	NA	NA	NA	6580008	6582529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_6580071_6580540_6581300_6582057
H1_mix_00005122	chr1	+	1951	8	NNC	ENSG00000204859.13	novel	2347	11	NA	NA	-142	-7	at_least_one_novel_splicesite	TRUE	canonical	1	3	junction_5	34.5973928473915	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCGTATTTCAGCCTGACA	5099	False	NA	15	True	AATAAA	-17	NA	6585159	6589273	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_6586031_6586694_6586788_6587204_6587292_6587477_6587633_6588059_6588197_6588281_6588443_6588755_6588845_6588915
H1_mix_00005124	chr1	+	1129	5	NNC	ENSG00000041988.16	novel	1361	6	NA	NA	-6	-12	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	41.1217703899042	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTCTATACGGTGTCG	297	False	NA	2	True	AATAAA	-2	NA	6625164	6633550	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_6625293_6628498_6628692_6630287_6630354_6632390_6632496_6632913
H1_mix_00005127	chr1	+	497	4	FSM	ENSG00000171735.19	ENST00000557126.5	486	4	-11	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	2134.62882539851	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGAAATAGAATAAAGTGAC	10	True	NA	-29	True	ACTAAA	-2	NA	6785479	6887865	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_6785576_6820180_6820251_6825091_6825211_6887653
H1_mix_00005130	chr1	+	5663	14	NIC	ENSG00000171735.19	novel	8314	23	NA	NA	-74682	-32	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	8.33542380091309	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTAAATTAAAAATGAAGAA	NA	False	NA	-13	True	NA	NA	NA	7661725	7769674	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_7661867_7670910_7671038_7677598_7677734_7732447_7732600_7736343_7736541_7736930_7737010_7737254_7737571_7737958_7738483_7744834_7745023_7745844_7746092_7747709_7747782_7751198_7751393_7752458_7752534_7766458
H1_mix_00005131	chr1	+	393	1	FSM	ENSG00000269925.1	ENST00000602406.1	393	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4567	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGTGCCTGTAGATTGTC	5074	False	NA	NA	False	AATAAA	-18	NA	7776382	7776775	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_7776400_7776800
H1_mix_00005136	chr1	+	804	6	FSM	ENSG00000116288.13	ENST00000377493.9	795	6	-9	0	0	0	multi-exon	FALSE	canonical	3	110	junction_3	1699.45454778879	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGATTGTTTCTTGTTTTG	1	True	NA	29	True	AATAAA	-19	NA	7961691	7985281	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_7961736_7962762_7962876_7965323_7965426_7970893_7970964_7977651_7977739_7984893
H1_mix_00005137	chr1	+	860	6	NIC	ENSG00000116288.13	novel	1127	7	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	110	junction_3	1880.04812704356	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGATTGTTTCTTGTTTT	2	True	NA	28	True	AATAAA	-18	NA	7961692	7985280	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_7961794_7962762_7962876_7965323_7965426_7970893_7970964_7977651_7977739_7984893
H1_mix_00005138	chr1	+	764	6	NIC	ENSG00000116288.13	novel	1127	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	32	junction_2	1864.0280684582	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGATTGTTTCTTGTTTTG	10	False	NA	29	True	AATAAA	-19	NA	7961747	7985281	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_7961794_7962762_7962876_7969344_7969405_7970893_7970964_7977651_7977739_7984893
H1_mix_00005139	chr1	+	373	1	FSM	ENSG00000238249.2	ENST00000425872.1	743	1	591	-221	591	221	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGCTAAATGTGAAATGTC	3473	False	NA	NA	False	NA	NA	NA	8893999	8894372	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_8894000_8894400
H1_mix_00005140	chr1	+	9139	5	NNC	ENSG00000049239.13	novel	9147	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	15	junction_1	6.32455532033676	18	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGGGCTTTAATTCTTTAT	-23	True	NA	15	True	AATAAA	-16	NA	9234773	9271337	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_9235067_9244932_9245562_9246965_9247084_9262058_9262329_9263508
H1_mix_00005141	chr1	+	1317	6	NIC	ENSG00000171612.7	novel	3865	7	NA	NA	45	-2402	combination_of_known_splicesites	FALSE	canonical	3	30	junction_3	118.388512956283	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATTTGGCTTGTGTCCTC	18	False	NA	22	True	ATTAAA	-22	NA	9539509	9582771	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_9539748_9553625_9553806_9567283_9567362_9573345_9573413_9579953_9580235_9582298
H1_mix_00005143	chr1	+	2519	6	FSM	ENSG00000188807.13	ENST00000508400.1	893	6	0	-1626	0	0	multi-exon	FALSE	canonical	2	4	junction_4	42.9725493774805	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGCCTGCTGGCTGTCTGT	11	False	NA	30	True	AAAAAG	-29	NA	9607727	9614873	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_9607790_9609839_9609912_9610505_9610806_9611014_9611074_9611752_9611891_9612985
H1_mix_00005145	chr1	+	299	1	FSM	ENSG00000202415.1	ENST00000365545.1	319	1	-106	126	-106	-126	mono-exon	FALSE	NA	NA	NA	NA	NA	560	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAAGTAGCTGCGTTCCCC	3751	False	NA	NA	False	AATAGA	-27	NA	9947211	9947510	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_9947200_9947500
H1_mix_00005146	chr1	+	1252	3	FSM	ENSG00000130939.20	ENST00000377153.5	1273	3	0	21	0	-21	multi-exon	FALSE	canonical	1	2	junction_2	153.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGATCCTTGCCTATA	92	False	NA	NA	False	TATAAA	-44	NA	10033273	10073097	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_10033695_10072027_10072215_10072453
H1_mix_00005148	chr1	+	10606	46	NIC	ENSG00000054523.19	novel	10855	49	NA	NA	-57	3	combination_of_known_splicesites	FALSE	canonical	3	38	junction_12	57.3552671222676	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGATGTGCATTTATTCT	-3	True	NA	32	True	AATAAA	-25	NA	10210512	10381606	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_10210879_10232249_10232435_10256246_10256324_10258492_10258673_10261904_10261971_10267379_10267559_10268151_10268264_10271501_10271580_10272240_10272307_10275427_10275504_10276320_10276400_10277985_10278129_10282321_10282534_10291081_10291162_10292046_10292123_10295085_10295166_10295659_10295767_10296581_10296666_10296896_10297078_10297173_10297247_10320042_10320137_10321708_10321858_10323883_10324063_10324757_10324896_10334519_10334639_10336656_10336743_10337073_10337204_10337370_10337534_10339768_10339860_10342049_10342169_10343231_10343288_10345844_10345954_10347760_10347828_10348648_10348734_10352630_10352737_10360928_10361044_10361691_10361826_10363282_10363345_10365099_10365246_10365408_10365649_10368466_10368539_10371140_10371263_10374315_10374466_10374853_10375047_10375254_10375374_10376544
H1_mix_00005149	chr1	+	2290	14	NNC	ENSG00000142657.21	novel	2268	13	NA	NA	0	79894	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	406.594326996285	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAGAATAGCTACAGC	5	True	NA	NA	False	AAAAAG	-3	NA	10399072	10500405	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_10399126_10399628_10399705_10400392_10400573_10403070_10403137_10404160_10404280_10408070_10408141_10411417_10411553_10413061_10413252_10416986_10417118_10417375_10417510_10418825_10418926_10419416_10419540_10419629_10420508_10500370
H1_mix_00005152	chr1	+	642	4	FSM	ENSG00000251503.8	ENST00000470413.6	626	4	-16	0	-16	0	multi-exon	FALSE	canonical	2	7	junction_3	123.381071842033	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCTTTCCTCTCCTCCT	291	False	NA	15	True	AATAAA	-16	NA	10430367	10451659	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_10430569_10433841_10433966_10434656_10434691_10451376
H1_mix_00005153	chr1	+	1001	5	FSM	ENSG00000251503.8	ENST00000400900.6	1469	5	266	202	-16	-52	multi-exon	FALSE	canonical	3	12	junction_4	120.640996348671	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTCTAATTTAAAAAATATT	291	False	NA	57	True	NA	NA	NA	10430367	10451951	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_10430569_10433841_10433966_10434656_10434691_10440346_10440414_10451376
H1_mix_00005157	chr1	+	766	8	NIC	ENSG00000142655.13	novel	1922	9	NA	NA	1	-994	combination_of_known_splicesites	FALSE	canonical	1	8	junction_3	34.9068731902238	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCAAGGGCCAGGTGCGGA	30	False	NA	NA	False	NA	NA	NA	10474982	10629764	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_10475003_10495273_10495322_10536212_10536298_10618331_10618418_10623018_10623122_10624339_10624438_10627271_10627364_10629530
H1_mix_00005158	chr1	+	716	5	FSM	ENSG00000120948.19	ENST00000473118.5	701	5	-15	0	-15	0	multi-exon	FALSE	canonical	2	3	junction_1	607.934618195082	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGAGGATGAGCTGCGG	NA	False	NA	NA	False	NA	NA	NA	11012328	11020489	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_11012429_11013715_11013966_11016843_11017008_11018732_11018874_11020428
H1_mix_00005160	chr1	+	1835	6	FSM	ENSG00000120948.19	ENST00000315091.7	1835	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	540.539508269285	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCAAGTCAAATGGATTC	1032	False	NA	16	True	AATAAA	-16	NA	11013715	11024183	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_11013966_11016843_11017008_11018732_11018874_11020428_11020600_11022123_11022242_11023192
H1_mix_00005161	chr1	+	1008	6	FSM	ENSG00000120948.19	ENST00000621790.4	1008	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	555.175864028688	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATCCGCTACTCTTTA	1044	False	NA	NA	False	NA	NA	NA	11013727	11023341	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_11013966_11016843_11017008_11018732_11018874_11020428_11020600_11022123_11022269_11023192
H1_mix_00005165	chr1	+	870	1	FSM	ENSG00000120948.19	ENST00000607145.1	870	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGTTTGTAGTAGTCA	0	True	NA	7	True	ATTAAA	-15	NA	11029658	11030528	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_11029700_11030500
H1_mix_00005170	chr1	+	966	11	FSM	ENSG00000011021.23	ENST00000376490.7	963	11	-3	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	45.0373178597483	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTATGTTTTGTCCTTTCCC	24	False	NA	NA	False	NA	NA	NA	11806259	11828218	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_11806350_11807130_11807191_11815845_11815912_11816614_11816681_11819487_11819555_11822694_11822802_11823706_11823834_11824485_11824554_11826155_11826225_11827088_11827222_11828105
H1_mix_00005175	chr1	+	4554	17	FSM	ENSG00000116688.18	ENST00000675872.1	4569	17	15	0	-6	0	multi-exon	FALSE	canonical	3	32	junction_1	69.3378278791599	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATCCTTTGTGAGATCT	9586	False	NA	6	True	AATAAA	-9	NA	11980252	12013500	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_11980485_11989164_11989344_11992554_11992691_11996155_11996319_11997296_11997422_11998769_11999096_12001400_12001555_12001768_12001837_12001981_12002104_12003991_12004119_12004508_12004614_12004824_12004928_12005710_12005932_12006537_12006694_12007052_12007250_12009591_12009727_12011495
H1_mix_00005176	chr1	+	4727	20	FSM	ENSG00000116688.18	ENST00000675817.1	4766	20	39	0	10	0	multi-exon	FALSE	canonical	0	0	junction_12	95.7180474014067	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATCCTTTGTGAGATCT	9581	False	NA	6	True	AATAAA	-9	NA	11980247	12013500	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_11980485_11981969_11982115_11989164_11989344_11992554_11992691_11996155_11996319_11997296_11997422_11998769_11998879_11998987_11999096_12001400_12001555_12001768_12001837_12001981_12002104_12003757_12003890_12003991_12004119_12004508_12004614_12004824_12004928_12005710_12005932_12006537_12006694_12007052_12007250_12009591_12009727_12011495
H1_mix_00005178	chr1	+	4772	20	FSM	ENSG00000116688.18	ENST00000675231.1	4772	20	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	109.917344921907	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATCCTTTGTGAGATCT	9632	False	NA	6	True	AATAAA	-9	NA	11980298	12013500	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_11980485_11981809_11982115_11982522_11982591_11989164_11989344_11992554_11992691_11996155_11996319_11997296_11997422_11998769_11998879_11998987_11999096_12001400_12001555_12001768_12001837_12001981_12002104_12003991_12004119_12004508_12004614_12004824_12004928_12005710_12005932_12006537_12006694_12007052_12007250_12009591_12009727_12011495
H1_mix_00005182	chr1	+	806	2	FSM	ENSG00000116691.11	ENST00000492256.1	806	2	0	0	0	0	multi-exon	FALSE	canonical	3	658	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTTCTGGGAGGAAAGGG	9221	False	NA	NA	False	NA	NA	NA	12028720	12029607	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_12029142_12029222
H1_mix_00005184	chr1	+	4475	21	FSM	ENSG00000048707.15	ENST00000646411.1	4522	21	47	0	47	0	multi-exon	FALSE	canonical	1	1	junction_1	12.7745841419594	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTAATCAATTTCTACAAC	108	False	NA	6	True	AATGAA	-39	NA	12356397	12510346	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_12356525_12362719_12362851_12363071_12363248_12368467_12368592_12369466_12369703_12373749_12373859_12378427_12378592_12379487_12379597_12382975_12383156_12385259_12385374_12386184_12386335_12400180_12400331_12401607_12401705_12403824_12403974_12415086_12415222_12416659_12416828_12455997_12456131_12460200_12460397_12497499_12497632_12506852_12507094_12508892
H1_mix_00005186	chr1	+	2682	8	FSM	ENSG00000116731.23	ENST00000376048.9	2688	8	0	6	0	-6	multi-exon	FALSE	canonical	2	6	junction_6	8.67555797182227	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGCGATTGTGAGGAACAA	7	False	NA	NA	False	AATAAA	-8	NA	13700239	13825059	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_13700301_13715540_13715615_13730999_13731118_13732778_13732883_13742004_13742158_13749360_13749488_13816426_13816571_13823158
H1_mix_00005188	chr1	+	2359	3	NIC	ENSG00000142634.13	novel	2422	4	NA	NA	-75	-3	combination_of_known_splicesites	FALSE	canonical	3	79	junction_2	252.5	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGTGTATGGTTCTTG	108	False	NA	17	True	GATAAA	-12	NA	15409812	15430336	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_15410280_15425870_15426019_15428592
H1_mix_00005189	chr1	+	2380	13	FSM	ENSG00000116138.13	ENST00000375838.5	2357	13	-23	0	-23	0	multi-exon	FALSE	canonical	3	38	junction_5	11.2657297440808	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAAGCAGGGCACAGTGG	NA	False	NA	NA	False	NA	NA	NA	15526789	15566595	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_15526959_15529087_15529273_15534236_15534304_15536474_15536815_15544398_15544584_15546766_15546872_15548269_15548429_15559525_15559657_15562141_15562326_15563928_15564112_15564282_15564360_15565918_15566000_15566081
H1_mix_00005191	chr1	+	753	1	FSM	ENSG00000235084.3	ENST00000454346.1	447	1	-1	-305	-1	305	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTTTAATCCCAGCTAC	57	False	NA	NA	False	AAAAAG	-30	NA	15604595	15605348	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_15604600_15605300
H1_mix_00005193	chr1	+	4013	19	NIC	ENSG00000116786.13	novel	4134	20	NA	NA	0	0	intron_retention	FALSE	canonical	2	4	junction_15	39.9612852769734	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTGTCACTGGCCCTTTT	-5	True	NA	21	True	AATAAA	-22	NA	15684319	15734769	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_15684619_15716236_15716344_15716706_15716817_15717892_15717993_15718537_15718626_15719733_15719921_15725316_15725546_15727013_15727833_15728078_15728149_15728266_15728358_15728668_15728734_15729101_15729191_15729796_15729930_15730531_15730723_15731191_15731258_15731949_15732049_15732349_15732530_15732611_15732729_15733796
H1_mix_00005194	chr1	+	439	4	FSM	ENSG00000162458.13	ENST00000430076.5	507	4	68	0	53	0	multi-exon	FALSE	canonical	2	2	junction_1	172.541782379419	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCCCGCGCCGCGATGTG	31	False	NA	NA	False	NA	NA	NA	15756711	15765035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_15756733_15758173_15758330_15764495_15764686_15764963
H1_mix_00005195	chr1	+	611	4	FSM	ENSG00000162458.13	ENST00000508310.5	611	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	166.85589258066	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGCCCGGCGTGGCCGC	3	True	NA	NA	False	NA	NA	NA	15756616	15765086	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_15756733_15758173_15758356_15764495_15764686_15764963
H1_mix_00005197	chr1	+	605	4	FSM	ENSG00000162458.13	ENST00000502638.5	582	4	-23	0	-22	0	multi-exon	FALSE	canonical	2	13	junction_1	163.996612431138	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCAGTTTGTGAGGCCCG	309	False	NA	NA	False	NA	NA	NA	15757923	15765076	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_15758044_15758173_15758356_15764495_15764686_15764963
H1_mix_00005202	chr1	+	1530	5	FSM	ENSG00000162458.13	ENST00000332305.5	1530	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	178.223700724679	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAAAAAAAAAGTGCCTT	314	False	NA	13	True	NA	NA	NA	15764952	15785329	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_15765234_15770408_15770579_15774617_15774797_15777169_15777288_15784547
H1_mix_00005205	chr1	+	1880	14	Fusion	ENSG00000186510.12_ENSG00000184908.20	novel	1997	19	NA	NA	-143	-1	multi-exon	TRUE	canonical	1	3	junction_3	9.44244477418902	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCCATCCCTCATCTC	4662	False	NA	20	True	AATAAA	-16	NA	16026695	16057310	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_+_16026776_16027309_16027436_16027820_16027906_16049814_16049917_16050515_16050601_16050874_16051049_16051477_16051548_16051709_16051821_16052197_16052412_16053638_16053773_16055434_16055524_16055677_16055759_16056421_16056509_16056868
H1_mix_00005206	chr1	+	470	2	ISM	ENSG00000184908.20	ENST00000683606.1	2058	13	12	7604	12	-7491	5prime_fragment	FALSE	canonical	3	25	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGGTGCCTTGGGCCC	0	True	NA	NA	False	NA	NA	NA	16048861	16049703	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_16049246_16049617
H1_mix_00005209	chr1	+	4619	7	FSM	ENSG00000157191.20	ENST00000496239.5	4619	7	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_4	37.6563407675255	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGTATGTGAAAGATGAAT	29	False	NA	10	True	AATAAA	-17	NA	16440757	16460077	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_16440854_16443631_16443733_16447869_16447975_16448059_16448142_16449092_16452016_16455817_16455894_16458841
H1_mix_00005212	chr1	+	6478	36	NNC	ENSG00000058453.17	novel	6660	37	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	41.971379947458	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTACAGCTGTGTCCCT	5	True	NA	28	True	TTTAAA	-4	NA	16921936	16972964	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_16922079_16922662_16922799_16929845_16930032_16930123_16930208_16930285_16930348_16930428_16930595_16931290_16931398_16936636_16936874_16937640_16937738_16938399_16938484_16938908_16939143_16939893_16940094_16944099_16944283_16945461_16945607_16946258_16946406_16946760_16946992_16948330_16948525_16948798_16948927_16950952_16951123_16953301_16953482_16954222_16954358_16954733_16954878_16955311_16955551_16955996_16956157_16958582_16958751_16960757_16961131_16965722_16965893_16965998_16966120_16966407_16966572_16968202_16968419_16969115_16969341_16969784_16969935_16970252_16970454_16970635_16970768_16971464_16971627_16972359
H1_mix_00005214	chr1	+	4625	29	FSM	ENSG00000074964.17	ENST00000361221.8	4625	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	77.8495409132781	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGATTGAGGTTTTGTTG	-25	True	NA	19	True	AATAAA	-21	NA	17539697	17697869	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_17539951_17580552_17580633_17587459_17587646_17588445_17588480_17602126_17602219_17603507_17603592_17607801_17607978_17613057_17613175_17616093_17616203_17619338_17619446_17621863_17621942_17622995_17623176_17624386_17624504_17625955_17626049_17627329_17627504_17632320_17632467_17634547_17634563_17634834_17635017_17637887_17638004_17638561_17638690_17640201_17640303_17648553_17648676_17654635_17654723_17655878_17656103_17656553_17656709_17664446_17664596_17687572_17687748_17695157_17695281_17696847
H1_mix_00005217	chr1	+	3020	16	NNC	ENSG00000074964.17	novel	4625	29	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	73.7682858686577	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGATTGAGGTTTTGTTG	7393	False	NA	19	True	AATAAA	-21	NA	17626008	17697869	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_17626049_17627329_17627504_17632320_17632467_17634834_17635017_17637887_17638004_17638561_17638690_17639237_17639314_17640201_17640303_17648553_17648676_17654635_17654723_17655878_17656103_17656553_17656709_17664446_17664596_17687572_17687748_17695157_17695281_17696847
H1_mix_00005220	chr1	+	930	6	FSM	ENSG00000117154.12	ENST00000412684.3	930	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	66.4036143594609	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGGATTCTGGTCCATG	NA	False	NA	NA	False	NA	NA	NA	18278844	18376367	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_18278885_18291865_18291988_18334891_18335011_18362114_18362231_18365222_18365698_18376309
H1_mix_00005221	chr1	+	1050	6	NNC	ENSG00000117154.12	novel	1885	6	NA	NA	598	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	77.0854071793099	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGGTTTGTGGCTCTGCA	5275	False	NA	16	True	ATTAAA	-23	NA	18361964	18378483	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_18362231_18365459_18365698_18376309_18376396_18376799_18376993_18377392_18377432_18378255
H1_mix_00005222	chr1	+	1515	2	FSM	ENSG00000230424.2	ENST00000690421.1	296	2	39	-1258	39	1258	multi-exon	FALSE	canonical	3	28	junction_1	0	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTGTCTCAAAAAAAAAAAA	3	True	NA	NA	False	NA	NA	NA	19210399	19214976	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_19210560_19213621
H1_mix_00005224	chr1	+	2402	8	NIC	ENSG00000053372.5	novel	2049	8	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	139.303808348545	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTGGCCCTCTTTTTTC	21	True	NA	18	True	AGTAAA	-15	NA	19251834	19260126	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_19252249_19254781_19254841_19255947_19256052_19257063_19257146_19257453_19257522_19257832_19257985_19258476_19258554_19258680
H1_mix_00005227	chr1	+	1405	5	FSM	ENSG00000173436.15	ENST00000481464.5	657	5	-106	-642	-44	641	multi-exon	FALSE	canonical	3	11	junction_1	2270.05534073511	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCAGCGCTCAGCCGTTC	NA	False	NA	NA	False	NA	NA	NA	19596932	19627271	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_19597110_19600786_19600972_19622099_19622148_19623473_19623584_19626386
H1_mix_00005228	chr1	+	813	1	FSM	ENSG00000226396.1	ENST00000457263.1	455	1	-295	-63	-295	63	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGAAACCTGTAAGAGAAAA	10010	False	NA	NA	False	AATAAA	-31	NA	19607818	19608631	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_19607800_19608600
H1_mix_00005231	chr1	+	1831	14	FSM	ENSG00000142794.19	ENST00000619554.1	1831	14	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_13	9.84074370595996	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCTGCAGGCAGGACGT	93	False	NA	NA	False	NA	NA	NA	21468549	21483412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_21468586_21468687_21468898_21470631_21470735_21471568_21471784_21472842_21472916_21473379_21473586_21474899_21474952_21478143_21478308_21479348_21479401_21480050_21480224_21480929_21480982_21481596_21481770_21482483_21482536_21483142
H1_mix_00005232	chr1	+	371	1	FSM	ENSG00000232037.3	ENST00000423231.1	483	1	87	25	87	-25	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTCTATGAATTCACGG	131	False	NA	NA	False	NA	NA	NA	21908184	21908555	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_21908200_21908600
H1_mix_00005233	chr1	+	965	2	FSM	ENSG00000218510.9	ENST00000635450.2	947	2	-18	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGACCTGATATCCACACA	-12	True	NA	NA	False	NA	NA	NA	22025492	22030617	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_22026120_22030279
H1_mix_00005234	chr1	+	335	1	Intergenic	novelGene_14	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTCTTGTTGCCCAGG	1188	False	NA	NA	False	AAAACA	-27	NA	22057075	22057410	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_22057100_22057400
H1_mix_00005235	chr1	+	5037	17	FSM	ENSG00000070886.12	ENST00000166244.8	5019	17	-19	1	-19	-1	multi-exon	FALSE	canonical	1	3	junction_5	20.7483997876945	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCGTCCCCCATTTTTT	-17	True	NA	7	True	AATAAA	-16	NA	22563469	22603594	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_22563730_22569288_22569354_22576216_22576881_22586479_22586636_22588870_22589207_22593325_22593451_22593523_22593687_22595229_22595324_22596105_22596174_22597311_22597477_22597675_22597862_22598150_22598213_22598837_22599048_22600660_22600811_22600897_22601089_22601299_22601474_22601626
H1_mix_00005236	chr1	+	4919	16	NNC	ENSG00000133216.17	novel	11035	16	NA	NA	-90	1117	intron_retention	FALSE	canonical	2	13	junction_6	24.3934417415829	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGCTAAGGGTTGCTCT	NA	False	NA	77	True	NA	NA	NA	22710748	22915387	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_22711044_22781420_22781486_22784391_22785077_22863036_22863193_22864876_22865213_22882358_22882484_22892976_22893047_22895471_22895581_22896413_22896479_22905986_22906110_22906709_22906958_22907952_22908169_22909021_22909172_22910381_22910576_22912443_22912600_22913461
H1_mix_00005238	chr1	+	525	3	FSM	ENSG00000004487.18	ENST00000481879.1	525	3	0	0	0	0	multi-exon	FALSE	canonical	3	3362	junction_1	85.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAATAAAACAGT	28	False	NA	NA	False	AGTAAA	-21	NA	23050424	23055418	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_23050521_23053760_23053840_23055068
H1_mix_00005239	chr1	+	1600	5	FSM	ENSG00000142676.14	ENST00000443624.6	1600	5	0	0	0	0	multi-exon	FALSE	canonical	3	6271	junction_1	2911.61488696565	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAATGTGCAATTCTGTT	5	True	NA	10	True	AATAAA	-39	NA	23691805	23696412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_23691830_23692608_23692760_23693806_23693914_23694659_23695909_23696343
H1_mix_00005240	chr1	+	614	8	FSM	ENSG00000011009.11	ENST00000420982.5	614	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	671.282354899933	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGGCTGAGAAGCTCCGG	4	True	NA	NA	False	NA	NA	NA	23791186	23794511	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_23791251_23792656_23792761_23793150_23793217_23793704_23793753_23793859_23793931_23794062_23794137_23794223_23794326_23794426
H1_mix_00005243	chr1	+	2737	3	FSM	ENSG00000189266.13	ENST00000374468.1	814	3	-341	-1582	-341	0	multi-exon	FALSE	canonical	3	32	junction_1	492	270	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTTGATTGCTTAATAT	202	False	NA	34	True	AATAAA	-35	NA	23959486	23963462	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_23959999_23960932_23961135_23961439
H1_mix_00005247	chr1	+	1826	12	NIC	ENSG00000133226.18	novel	3735	17	NA	NA	-152	0	combination_of_known_junctions	FALSE	canonical	1	284	junction_9	546.907851787765	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACATCTTTGCTTCAGTG	0	True	NA	NA	False	AAAAAG	-14	NA	24643119	24662804	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970_24650087_24651408_24651613_24652433_24652629_24652912_24653033_24654854_24655124_24660718_24660800_24661312_24661397_24662659
H1_mix_00005249	chr1	+	3953	18	NIC	ENSG00000133226.18	novel	3735	17	NA	NA	-152	0	combination_of_known_junctions	FALSE	canonical	1	284	junction_9	485.781295572429	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAGTAGTGCTTATGTAAA	0	True	NA	39	True	AATAAA	-31	NA	24643119	24673281	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970_24650087_24651408_24651613_24652433_24652629_24652912_24653033_24654854_24655124_24660718_24660800_24661309_24661397_24662659_24662805_24663182_24663225_24666814_24666926_24669122_24669588_24670119_24670316_24671385_24671596_24672181
H1_mix_00005253	chr1	+	672	6	FSM	ENSG00000169504.15	ENST00000497755.1	672	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	1339.71289461586	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTCTCCTCTCCCTGAT	23	True	NA	NA	False	NA	NA	NA	24745381	24839907	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_24745626_24793176_24793214_24797741_24797852_24814093_24814220_24827009_24827117_24839859
H1_mix_00005254	chr1	+	2497	2	FSM	ENSG00000169504.15	ENST00000489758.1	439	2	-248	-1810	-221	1810	multi-exon	FALSE	canonical	3	3055	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCCCGTCTGGGAGGTG	1058	False	NA	NA	False	NA	NA	NA	24745160	24799773	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_24745626_24797741
H1_mix_00005256	chr1	+	579	1	FSM	ENSG00000272432.1	ENST00000607698.1	485	1	-85	-9	-85	9	mono-exon	FALSE	NA	NA	NA	NA	NA	234	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTGGGTTAATTGCCT	NA	False	NA	5	True	AATAAA	-19	NA	25247751	25248330	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_25247800_25248300
H1_mix_00005258	chr1	+	4330	13	FSM	ENSG00000162430.18	ENST00000361547.7	4314	13	-16	0	-16	0	multi-exon	FALSE	canonical	3	19	junction_3	83.5694571399544	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGAGTGGTTCTAAGTGCT	NA	False	NA	23	True	AATAAA	-16	NA	25800176	25818221	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_25800414_25801042_25801161_25802015_25802118_25805141_25805276_25808579_25808790_25809025_25809151_25809682_25809821_25811453_25811536_25811690_25811880_25812686_25812793_25813880_25813994_25814076_25814179_25815547
H1_mix_00005260	chr1	+	3450	13	Fusion	ENSG00000117640.18_ENSG00000162430.18	novel	2032	13	NA	NA	0	-943	multi-exon	TRUE	non_canonical	0	0	junction_12	70.0540961606735	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCCACTGCGCCTGGC	26	False	NA	NA	False	NA	NA	NA	25800230	25822804	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_+_25800414_25801042_25801161_25805141_25805276_25808579_25808790_25809025_25809151_25809682_25809821_25811453_25811536_25811690_25811880_25812686_25812793_25813880_25813994_25814076_25814179_25815547_25817234_25822540
H1_mix_00005264	chr1	+	4269	4	FSM	ENSG00000175087.10	ENST00000374271.8	4279	4	2	8	2	5	multi-exon	FALSE	canonical	2	3	junction_1	14.6363322667334	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACTGAAAATTCTA	9	True	NA	NA	False	AATAAA	-15	NA	26111838	26125535	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26111916_26112459_26112651_26114291_26114594_26121836
H1_mix_00005266	chr1	+	538	3	FSM	ENSG00000142675.18	ENST00000465415.1	624	3	0	86	0	-86	multi-exon	FALSE	canonical	3	90	junction_1	17.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGGCGTGGTGGCTTAG	-6	True	NA	NA	False	AAAACA	-28	NA	26177502	26180997	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26177600_26180452_26180611_26180714
H1_mix_00005267	chr1	+	1209	13	FSM	ENSG00000142675.18	ENST00000525687.5	1200	13	-9	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	29.7306192707488	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTCATGCCGTGAGCTGG	-6	True	NA	NA	False	NA	NA	NA	26177502	26185041	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26177600_26180452_26180611_26180714_26180897_26181856_26181942_26182360_26182403_26182479_26182585_26183196_26183257_26183345_26183415_26183728_26183831_26184141_26184288_26184400_26184508_26184584_26184613_26185013
H1_mix_00005268	chr1	+	2528	21	FSM	ENSG00000142675.18	ENST00000482227.5	2507	21	-21	0	0	0	multi-exon	TRUE	canonical	1	2	junction_5	26.9285629026133	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGTCTACATGTAACTT	-18	True	NA	24	True	AATAAA	-16	NA	26177490	26189882	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26177600_26180452_26180611_26180714_26180897_26181856_26181942_26182360_26182403_26182484_26182585_26183196_26183257_26183345_26183415_26183728_26183831_26184070_26184142_26184213_26184288_26184400_26184508_26184584_26184613_26185013_26185187_26187167_26187242_26187410_26187483_26188233_26188308_26188441_26188504_26188597_26188698_26188771_26188954_26189278
H1_mix_00005269	chr1	+	562	4	FSM	ENSG00000142675.18	ENST00000524529.6	562	4	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_3	4.98887651569859	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGAGCCCCACACCCTTC	4078	False	NA	NA	False	NA	NA	NA	26181586	26183256	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26181942_26182360_26182403_26182479_26182585_26183196
H1_mix_00005270	chr1	+	642	4	FSM	ENSG00000142675.18	ENST00000484874.2	642	4	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	5.09901951359278	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCCAGGAACAGTGGCGGA	5260	False	NA	NA	False	GGGGCT	-43	NA	26187292	26188853	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26187483_26188233_26188504_26188597_26188698_26188771
H1_mix_00005271	chr1	+	2140	5	ISM	ENSG00000130695.16	ENST00000469609.5	2384	7	1738	0	0	0	3prime_fragment	FALSE	canonical	3	87	junction_4	77.7089924011372	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTCAGTTTTCCATACCC	1754	False	NA	16	True	AATAAA	-14	NA	26271027	26278807	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_26271108_26272020_26272072_26274963_26275072_26276534_26276761_26277132
H1_mix_00005273	chr1	+	4701	2	ISM	ENSG00000130695.16	ENST00000491670.1	941	3	1179	-2047	1179	0	3prime_fragment	FALSE	canonical	3	276	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTCAGTTTTCCATACCC	3370	False	NA	16	True	AATAAA	-14	NA	26272643	26278807	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_26275072_26276534
H1_mix_00005274	chr1	+	359	1	Genic_Genomic	ENSG00000169442.9	novel	NA	NA	NA	NA	2208	1	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGTCCTGCTTGTGGTTA	2208	False	NA	20	True	AATAAA	-20	NA	26320165	26320524	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_+_26320200_26320500
H1_mix_00005275	chr1	+	3458	5	FSM	ENSG00000131914.11	ENST00000254231.4	3458	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	1155.30104301866	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTCATCCCCTTGTCA	0	True	NA	28	True	AATAAA	-20	NA	26410816	26429719	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26410923_26411385_26411583_26425302_26425488_26426241_26428588_26429095
H1_mix_00005276	chr1	+	3329	9	FSM	ENSG00000117682.17	ENST00000434391.6	3338	9	9	0	9	0	multi-exon	FALSE	canonical	3	4	junction_3	68.9814286601836	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGATGTAAAACTTGTTTG	4216	False	NA	9	True	AATAGA	-15	NA	26432290	26471294	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26432377_26432890_26433009_26438167_26438285_26442707_26442874_26446315_26446433_26447558_26447661_26457790_26457906_26460036_26460145_26468894
H1_mix_00005277	chr1	+	685	3	FSM	ENSG00000117682.17	ENST00000487944.5	717	3	-24	56	0	-56	multi-exon	FALSE	canonical	3	118	junction_1	69.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCCCCTGTACTCTAGC	-7	True	NA	NA	False	AATAGA	-3	NA	26432320	26438678	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26432377_26432890_26433009_26438167
H1_mix_00005283	chr1	+	1331	9	NIC	ENSG00000117682.17	novel	703	6	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	78.5524307389657	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGGGTTTGGAGAGCAAAG	3	True	NA	2	True	ACTAAA	-18	NA	26432386	26469373	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_26432416_26432890_26433009_26438167_26438285_26442730_26442874_26446315_26446433_26447558_26447661_26457790_26457906_26460036_26460145_26468891
H1_mix_00005286	chr1	+	2397	22	FSM	ENSG00000117676.14	ENST00000526792.5	2596	22	199	0	89	0	multi-exon	FALSE	canonical	2	9	junction_1	96.2382955159199	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTATGAAAAAAATG	2	False	NA	NA	False	TATAAA	-2	NA	26531416	26574431	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26531439_26536924_26536970_26546866_26546984_26547188_26547271_26551396_26551478_26551643_26551724_26553390_26553498_26554213_26554252_26554595_26554739_26555150_26555222_26555536_26555626_26556653_26556719_26556997_26557101_26558806_26558938_26560725_26560852_26561044_26561135_26561504_26561664_26571448_26571611_26571848_26571926_26572175_26572294_26573223_26573362_26574078
H1_mix_00005290	chr1	+	6531	4	FSM	ENSG00000060642.12	ENST00000674273.1	4972	4	-1559	0	-418	0	multi-exon	FALSE	canonical	2	10	junction_1	33.2498955721	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTATGCCTCCTGTCCTCA	NA	False	NA	NA	False	AATAAA	-9	NA	26786635	26800652	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26788820_26790758_26790894_26794112_26795235_26797562
H1_mix_00005291	chr1	+	1340	10	NNC	ENSG00000090273.14	novel	1792	9	NA	NA	0	41187	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	994.940509419508	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGAGAGGGTCTTTCTGT	-12	True	NA	NA	False	AAAAAG	-2	NA	26921742	26988058	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_26921930_26924088_26924167_26941456_26941661_26941752_26941819_26942659_26942777_26942870_26943066_26945389_26945474_26945567_26945687_26946129_26946395_26988033
H1_mix_00005292	chr1	+	2113	3	Intergenic	novelGene_18	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_2	3.5	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACAAACAAAC	NA	False	NA	NA	False	AATAAA	-39	NA	27058447	27065582	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_27058523_27060013_27060081_27063611
H1_mix_00005294	chr1	+	1916	15	FSM	ENSG00000142765.18	ENST00000318074.9	1900	15	-16	0	-14	0	multi-exon	FALSE	canonical	0	0	junction_5	29.8363735007033	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAAGGCTGGTGTCTGCTG	5920	False	NA	NA	False	AATAAA	-18	NA	27342005	27353932	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_27342151_27345296_27345526_27347420_27347570_27347807_27347881_27347966_27348013_27349115_27349153_27349397_27349499_27349651_27349766_27349971_27350133_27350388_27350486_27350793_27350953_27351257_27351337_27351455_27351556_27353282_27353489_27353712
H1_mix_00005296	chr1	+	793	4	FSM	ENSG00000142765.18	ENST00000615284.1	793	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	35.2357142052713	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGTGTCTGCTGGGGCA	6261	False	NA	NA	False	AATAAA	-23	NA	27351074	27353937	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_27351337_27351455_27351556_27353282_27353489_27353712
H1_mix_00005298	chr1	+	520	1	FSM	ENSG00000231344.1	ENST00000446554.1	349	1	87	-258	87	258	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCACCTGAGCCTGGGAA	NA	False	NA	NA	False	NA	NA	NA	27739177	27739697	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_27739200_27739700
H1_mix_00005301	chr1	+	247	1	FSM	ENSG00000270031.1	ENST00000602843.1	359	1	200	-88	200	88	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCGAAAATCTTCTCCCA	NA	False	NA	NA	False	NA	NA	NA	27820182	27820429	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_27820200_27820400
H1_mix_00005303	chr1	+	1578	4	FSM	ENSG00000158156.9	ENST00000675359.1	1578	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	50.2858495669176	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCTTAGCTCCCCTATCC	217	False	NA	NA	False	NA	NA	NA	27960261	27967572	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_27960363_27963496_27963694_27965718_27965929_27966502
H1_mix_00005304	chr1	+	1791	3	FSM	ENSG00000130772.14	ENST00000479574.5	862	3	22	-951	-16	2	multi-exon	FALSE	canonical	1	8	junction_1	22	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGTAATTCTGATTC	-33	True	NA	13	True	AATAAA	-16	NA	28329023	28335967	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_28329125_28330596_28330736_28334416
H1_mix_00005306	chr1	+	212	1	FSM	ENSG00000229820.2	ENST00000438601.2	394	1	-33	215	-33	-215	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTCAGTTAGATCCTGAA	NA	False	NA	NA	False	NA	NA	NA	28453507	28453719	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_28453500_28453700
H1_mix_00005307	chr1	+	204	1	FSM	ENSG00000200087.1	ENST00000363217.1	204	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGTATACTAGATTTTAAG	-2	True	NA	9	True	NA	NA	NA	28508558	28508762	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_28508600_28508800
H1_mix_00005309	chr1	+	1577	11	FSM	ENSG00000180198.17	ENST00000373831.7	1577	11	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_3	163.99649386496	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCCTCCTCTTTGGAAT	15	True	NA	22	True	NA	NA	NA	28518256	28538164	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_28518309_28529857_28529940_28530522_28530616_28531802_28531991_28532170_28532351_28535049_28535147_28535257_28535381_28535870_28536027_28536261_28536382_28536746_28536900_28537831
H1_mix_00005311	chr1	+	1146	10	FSM	ENSG00000180098.9	ENST00000480930.5	1132	10	-14	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	88.7703376106353	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTTTGGAGATCATGAA	-10	True	NA	19	True	NA	NA	NA	28553084	28577744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_28553138_28553639_28553738_28560632_28560733_28561112_28561261_28561345_28561399_28564702_28564835_28567293_28567414_28571175_28571339_28571866_28571901_28577499
H1_mix_00005312	chr1	+	3093	2	FSM	ENSG00000188060.8	ENST00000373826.3	1950	2	75	-1218	10	1212	multi-exon	FALSE	canonical	2	4	junction_1	0	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTGTACTCATTAGCC	10	False	NA	NA	False	AATAAA	-27	NA	28592274	28596661	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_28592400_28593693
H1_mix_00005313	chr1	+	1988	10	FSM	ENSG00000162419.13	ENST00000294409.2	1912	10	-76	0	-74	0	multi-exon	TRUE	canonical	3	26	junction_1	12.4731811064211	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAACAAAATC	NA	False	NA	-75	True	NA	NA	NA	28668703	28714873	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_28668840_28683582_28683741_28690073_28690187_28691584_28691710_28692941_28693046_28696926_28697085_28702437_28702570_28704191_28704330_28710519_28710643_28714072
H1_mix_00005314	chr1	+	1955	10	FSM	ENSG00000162419.13	ENST00000361872.8	1894	10	-74	13	-74	0	multi-exon	FALSE	canonical	3	12	junction_1	14.9079480003201	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAACAAAATC	NA	False	NA	-75	True	NA	NA	NA	28668703	28714873	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_28668840_28683585_28683741_28690103_28690187_28691584_28691710_28692941_28693046_28696926_28697085_28702437_28702570_28704191_28704330_28710519_28710643_28714072
H1_mix_00005315	chr1	+	4145	4	FSM	ENSG00000198492.16	ENST00000478283.5	2594	4	-902	-649	-573	0	multi-exon	FALSE	canonical	3	1200	junction_2	44.5745318414999	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCTAGTACCATTTAGTA	NA	False	NA	21	True	AATAAA	-22	NA	28736047	28769774	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_28737683_28738258_28738339_28742402_28743987_28768928
H1_mix_00005317	chr1	+	5928	18	NIC	ENSG00000159023.22	novel	2937	20	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	96	junction_12	69.5243354372631	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTCTCTGTGAGGATT	NA	False	NA	5	True	AATAAA	-13	NA	28914506	29120038	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_28914769_28987430_28987906_28993329_28993543_28997214_28997320_29011864_29011908_29015691_29015768_29018223_29018443_29030399_29030488_29033092_29033246_29035825_29035924_29039253_29039427_29053103_29053313_29064981_29065159_29097806_29097936_29109335_29109438_29112367_29112449_29115698_29115804_29116818
H1_mix_00005319	chr1	+	6485	22	NIC	ENSG00000159023.22	novel	6031	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_14	94.0107100571109	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTCTCTGTGAGGATT	12	True	NA	5	True	AATAAA	-13	NA	28914561	29120038	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_28914769_28987430_28987906_28993329_28993543_28997214_28997320_29011864_29011908_29015691_29015768_29018223_29018443_29030399_29030488_29033092_29033246_29035825_29035924_29039253_29039427_29053103_29053313_29058588_29058646_29058810_29058853_29060421_29060485_29064981_29065159_29096154_29096605_29097806_29097936_29109335_29109438_29112367_29112449_29115698_29115804_29116818
H1_mix_00005320	chr1	+	5160	27	NIC	ENSG00000060656.20	novel	5573	30	NA	NA	-31	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_11	55.8337557757282	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGCAGCCCTGTGTGTGT	NA	False	NA	28	True	AATAAA	-19	NA	29236484	29326800	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_29236718_29255274_29255407_29258504_29258777_29259260_29259343_29259448_29259565_29259869_29260045_29260609_29260904_29275447_29275757_29279011_29279122_29279455_29279658_29280038_29280142_29291868_29292027_29303854_29304046_29304773_29304850_29305351_29305429_29310743_29310781_29311455_29311554_29311642_29311760_29312551_29312707_29315371_29315508_29316001_29316152_29317747_29317922_29320684_29320826_29323370_29323497_29323630_29323789_29325190_29325327_29325598
H1_mix_00005322	chr1	+	483	2	Intergenic	novelGene_22	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	85	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTATATACTCTTTTTT	NA	False	NA	NA	False	AGTAAA	-15	NA	31155075	31156130	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_31155153_31155724
H1_mix_00005323	chr1	+	1861	10	FSM	ENSG00000168528.12	ENST00000536859.5	2072	10	211	0	168	0	multi-exon	FALSE	canonical	0	0	junction_1	86.4502997160082	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGCCCCTCACCCTCA	165	False	NA	30	True	AATAAA	-22	NA	31410384	31434680	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_31410436_31423692_31423855_31424682_31424874_31425329_31425410_31425775_31425914_31426653_31426824_31428977_31429069_31429396_31429539_31432966_31433186_31434063
H1_mix_00005324	chr1	+	788	7	FSM	ENSG00000142910.16	ENST00000478398.5	765	7	-23	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	21.7849336316027	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCAGCACTTGGGTGA	4	True	NA	NA	False	NA	NA	NA	31576544	31585340	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_31576596_31579203_31579268_31583148_31583242_31583460_31583576_31584677_31584802_31584885_31585037_31585150
H1_mix_00005328	chr1	+	7481	15	NNC	ENSG00000025800.14	novel	7355	14	NA	NA	-16	0	intron_retention	FALSE	canonical	3	10	junction_1	89.8593004510441	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAATTGTCTTCTTTGGCT	-14	True	NA	15	True	AATAAA	-17	NA	32108039	32176563	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_32108135_32139754_32139865_32154587_32154722_32156852_32156946_32157345_32157446_32158266_32158362_32159399_32159532_32160614_32160704_32161946_32162047_32162360_32162525_32163234_32163314_32166104_32166231_32167168_32167297_32169881_32170061_32170706
H1_mix_00005331	chr1	+	2249	4	FSM	ENSG00000160051.12	ENST00000617816.1	2089	4	-26	-134	-26	0	multi-exon	FALSE	canonical	3	32	junction_3	3.68178700572909	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGAGTCTGGCTGCTTTC	-14	True	NA	12	True	AATAAA	-14	NA	32205644	32208682	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32205724_32206153_32206762_32207001_32207121_32207239
H1_mix_00005332	chr1	+	1993	5	NNC	ENSG00000160051.12	novel	2012	5	NA	NA	13	2	intron_retention	FALSE	canonical	0	0	junction_4	15.9843673631458	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTCTGGCTGCTTTCAT	25	False	NA	14	True	AATAAA	-16	NA	32205683	32208684	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_32205724_32206153_32206298_32206508_32206762_32207001_32207113_32207239
H1_mix_00005335	chr1	+	1419	10	FSM	ENSG00000084623.12	ENST00000678883.1	1400	10	-19	0	0	0	multi-exon	FALSE	canonical	3	929	junction_1	240.608231338112	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGTGGATCTCCAACCA	1	True	NA	-66	True	AAAAAG	-2	NA	32222404	32231505	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926
H1_mix_00005336	chr1	+	1738	10	FSM	ENSG00000084623.12	ENST00000678889.1	1736	10	-2	0	0	0	multi-exon	FALSE	canonical	3	929	junction_1	249.315061719103	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTTGTGGTGTCTGTTT	1	True	NA	30	True	AATAAA	-31	NA	32222404	32231601	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32229209_32230926_32231020_32231114
H1_mix_00005339	chr1	+	2187	13	FSM	ENSG00000182866.17	ENST00000333070.4	2166	13	-21	0	0	0	multi-exon	TRUE	canonical	2	2	junction_9	48.0199611272923	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACATCTCTTTGCTGTCCA	NA	False	NA	15	True	AATAAA	-19	NA	32274110	32286162	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32274227_32274324_32274435_32274736_32274819_32274992_32275084_32275320_32275420_32275568_32275673_32275913_32276064_32276336_32276490_32276606_32276787_32279580_32279748_32279840_32279995_32280078_32280211_32285513
H1_mix_00005342	chr1	+	1047	6	FSM	ENSG00000116478.12	ENST00000490081.5	1047	6	0	0	0	0	multi-exon	TRUE	canonical	3	1052	junction_1	86.5531050858373	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGACCCTGACAAGCGCAT	4441	False	NA	NA	False	NA	NA	NA	32327188	32331781	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32327678_32329067_32329161_32330577_32330687_32330767_32330909_32331473_32331583_32331675
H1_mix_00005344	chr1	+	342	3	Genic_Genomic	ENSG00000162521.19	novel	7883	12	NA	NA	-77403	-2	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACCCCATGCTGATGGGT	NA	False	NA	22	True	AATAAA	-13	NA	32573738	32680649	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_+_32573764_32641265_32641291_32680357
H1_mix_00005345	chr1	+	764	4	FSM	ENSG00000162521.19	ENST00000401893.7	762	4	-2	0	0	0	multi-exon	FALSE	canonical	3	1868	junction_1	139.452102490027	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGGTGCTGTTTAAGCA	-1	True	NA	NA	False	NA	NA	NA	32651207	32668579	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32651323_32651913_32652062_32657426_32657573_32668224
H1_mix_00005349	chr1	+	797	8	FSM	ENSG00000162521.19	ENST00000460669.5	783	8	-14	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	698.125595390096	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCATGCTGATGGGTTTTA	7185	False	NA	26	True	AATAAA	-17	NA	32669092	32680653	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32669133_32669230_32669358_32669485_32669564_32672449_32672527_32672641_32672700_32672790_32672902_32679639_32679818_32680525
H1_mix_00005352	chr1	+	301	2	FSM	ENSG00000142920.17	ENST00000497280.1	341	2	40	0	40	0	multi-exon	FALSE	canonical	3	5	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACCCTGGAGCTGGGAGT	NA	False	NA	NA	False	NA	NA	NA	33093281	33094713	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_33093417_33094547
H1_mix_00005355	chr1	+	4363	8	FSM	ENSG00000121903.15	ENST00000684572.1	9456	8	19	5074	4	62	multi-exon	FALSE	canonical	1	3	junction_3	1.1780301787479	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTCTTTTTCTCAGGGG	13	True	NA	NA	False	NA	NA	NA	33472663	33496569	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_33472692_33479178_33479706_33488464_33488652_33489114_33489192_33489517_33489603_33491024_33491703_33493186_33493616_33494217
H1_mix_00005356	chr1	+	4602	9	FSM	ENSG00000197056.11	ENST00000373329.5	3980	9	-43	-579	-34	574	multi-exon	FALSE	canonical	3	22	junction_1	37.3210312692455	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTATTTCTTTATACTTCA	NA	False	NA	NA	False	AATATA	-29	NA	35079347	35116433	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_35079443_35095818_35095892_35097316_35097567_35104294_35104470_35104556_35104770_35110293_35110448_35111771_35111913_35112086_35112131_35112976
H1_mix_00005357	chr1	+	4772	10	FSM	ENSG00000197056.11	ENST00000359858.9	4161	10	-37	-574	-34	574	multi-exon	FALSE	canonical	3	52	junction_1	27.8744982792693	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTATTTCTTTATACTTCA	NA	False	NA	NA	False	AATATA	-29	NA	35079347	35116433	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_35079443_35093913_35094084_35095818_35095892_35097316_35097567_35104294_35104470_35104556_35104770_35110293_35110448_35111771_35111913_35112086_35112131_35112976
H1_mix_00005358	chr1	+	4907	11	NNC	ENSG00000197056.11	novel	600	4	NA	NA	1402	590	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	41.8474610938346	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAAAAAGTTTTGTTTTT	1399	False	NA	NA	False	AATATA	-45	NA	35080792	35116449	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_35080909_35093343_35093442_35093913_35094084_35095818_35095892_35097316_35097567_35104294_35104470_35104556_35104770_35110293_35110448_35111771_35111913_35112086_35112131_35112976
H1_mix_00005360	chr1	+	8584	31	NIC	ENSG00000146463.12	novel	7366	30	NA	NA	0	1156	combination_of_known_junctions	TRUE	canonical	3	76	junction_1	76.754905742601	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTCTGAATTTTTACT	6	True	NA	6	True	AATAAA	-15	NA	35268708	35423214	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_35269086_35295926_35295989_35325359_35325406_35358924_35359447_35361193_35361256_35361618_35361790_35370028_35370114_35370371_35370628_35381258_35381434_35381545_35381759_35385441_35385593_35386073_35386190_35387002_35387279_35387453_35387605_35388909_35389083_35389947_35390099_35392211_35392353_35392646_35392685_35393594_35393740_35396551_35396671_35397376_35397546_35398412_35398467_35398863_35399044_35399481_35399577_35405022_35405195_35405372_35405469_35408007_35408160_35413971_35414084_35415465_35415715_35418442_35418573_35419469
H1_mix_00005361	chr1	+	3657	8	NIC	ENSG00000020129.16	novel	3433	8	NA	NA	-8	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	76.9131500659102	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGAAGCCTCCTGCGTGGT	8	True	NA	14	True	AATAAA	-14	NA	35557822	35566773	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_35557884_35558155_35558485_35559106_35559248_35560325_35561295_35562391_35562634_35563201_35563427_35563766_35563910_35565226
H1_mix_00005362	chr1	+	297	2	FSM	ENSG00000134698.11	ENST00000496257.1	297	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGAGTGATGCTGCAACT	NA	False	NA	NA	False	NA	NA	NA	35853487	35854758	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_35853703_35854676
H1_mix_00005364	chr1	+	2836	17	FSM	ENSG00000092847.13	ENST00000635259.1	2836	17	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	23.2881910793861	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGGGCTTGAGAAAGTG	9343	False	NA	NA	False	NA	NA	NA	35892579	35920019	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_35892678_35893096_35893279_35893591_35893811_35894036_35894172_35894314_35894403_35895121_35895270_35901473_35901594_35901947_35902071_35902203_35902338_35906934_35907120_35913841_35914002_35914183_35914275_35915347_35915543_35917592_35917728_35918321_35918424_35919054_35919255_35919498
H1_mix_00005365	chr1	+	1726	7	FSM	ENSG00000126070.20	ENST00000324350.9	1726	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	34.3737626039914	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-16	True	NA	NA	False	NA	NA	NA	35930717	35983409	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_35930799_35931228_35931446_35945691_35945864_35966954_35967076_35972023_35972233_35973374_35973512_35982620
H1_mix_00005367	chr1	+	1544	10	NIC	ENSG00000092850.12	novel	1738	10	NA	NA	63	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	7.88810637746616	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCGGCTGTTCTCTGCCCC	0	True	NA	2	True	AATAAA	-15	NA	36084400	36088275	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_36084511_36084869_36085078_36085162_36085289_36085835_36086042_36086703_36086848_36086930_36087046_36087203_36087312_36087438_36087583_36087727_36087808_36087972
H1_mix_00005368	chr1	+	3426	16	NIC	ENSG00000116871.16	novel	3456	16	NA	NA	-6	0	intron_retention	FALSE	canonical	3	37	junction_8	122.051282482224	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCAATCCTGCCTGTT	2	True	NA	6	True	AATAAA	-7	NA	36155958	36180840	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_36156464_36170970_36171316_36171512_36171582_36172463_36172628_36173363_36173479_36176198_36176582_36176696_36176843_36177872_36178202_36178445_36178597_36178684_36178824_36178920_36179026_36179261_36179316_36179514_36179558_36179665_36179757_36179873_36180068_36180247
H1_mix_00005373	chr1	+	5910	13	FSM	ENSG00000214193.11	ENST00000505871.7	5952	13	42	0	24	0	multi-exon	FALSE	canonical	0	0	junction_9	6.62644114304369	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGCTGAACATGTACAG	43	False	NA	105	True	NA	NA	NA	36307151	36324977	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_36307286_36307516_36307608_36307769_36307826_36307917_36307964_36308108_36308210_36308388_36308476_36309547_36309591_36319070_36319165_36319259_36319313_36319441_36319537_36319674_36320799_36320914_36320979_36321055
H1_mix_00005375	chr1	+	2721	6	FSM	ENSG00000163874.11	ENST00000640233.1	2721	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	18.2164760587771	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTGAGCCCTTTCAAGAG	0	True	NA	17	True	AATAAA	-9	NA	37474579	37484360	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_37474630_37475458_37475940_37480289_37480430_37481600_37481836_37482349_37482541_37482736
H1_mix_00005379	chr1	+	291	2	Intergenic	novelGene_29	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	0	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGTTCCATCTGTGTGG	NA	False	NA	NA	False	NA	NA	NA	38425451	38427414	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_38425673_38427344
H1_mix_00005380	chr1	+	823	3	Intergenic	novelGene_30	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	16	junction_2	10	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAAAGCCTGTTTGGTGGT	NA	False	NA	4	True	AATAAA	-16	NA	38425451	38430737	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_38425673_38427535_38427623_38430222
H1_mix_00005381	chr1	+	634	3	Intergenic	novelGene_33	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_2	11	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	NA	False	NA	6	True	AATAAA	-18	NA	38425503	38430739	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_38425673_38427535_38427623_38430361
H1_mix_00005382	chr1	+	577	3	Intergenic	novelGene_34	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	23	junction_2	25	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	10	True	AATAAA	-22	NA	38425564	38430743	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_38425673_38427538_38427623_38430358
H1_mix_00005383	chr1	+	1293	1	FSM	ENSG00000127603.32	ENST00000602528.2	2110	1	776	41	776	-41	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTACTATTAATAAATGT	667	False	NA	NA	False	AATAAA	-27	NA	39205623	39206916	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_39205600_39206900
H1_mix_00005384	chr1	+	500	3	ISM	ENSG00000127603.32	ENST00000472385.2	3660	18	199923	12831	965	1110	internal_fragment	FALSE	canonical	3	41	junction_1	10	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAATGGTGCTTTGAACTG	7	False	NA	NA	False	NA	NA	NA	39284090	39285330	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_39284429_39285082_39285211_39285296
H1_mix_00005385	chr1	+	12592	43	NIC	ENSG00000127603.32	novel	7104	41	NA	NA	-513	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	104.426739284299	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAGTGTTTAAGGAACTC	11	True	NA	9	True	ATTAAA	-13	NA	39408989	39486217	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_39414478_39422373_39422536_39422729_39422901_39424027_39424195_39427454_39427615_39427960_39428288_39429241_39429327_39429826_39430069_39430701_39430909_39432534_39432655_39433047_39433156_39434413_39434633_39435557_39435762_39436481_39436491_39437776_39438009_39439273_39439501_39441002_39441126_39441223_39441326_39441951_39442054_39442146_39442321_39442411_39442568_39442713_39442912_39443445_39443575_39444661_39444836_39447431_39447588_39447691_39447899_39448032_39448153_39448593_39448764_39451051_39451212_39452155_39452351_39452683_39452813_39453706_39453851_39454908_39455098_39458369_39458491_39459085_39459250_39460631_39460795_39461882_39462038_39463611_39463687_39465094_39465113_39468614_39468733_39479797_39480010_39484600_39484731_39485537
H1_mix_00005397	chr1	+	672	8	FSM	ENSG00000131236.18	ENST00000420216.5	668	8	-4	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	925.902956963788	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTGGGTCAAAGCTTATT	-23	True	NA	NA	False	NA	NA	NA	40040728	40066229	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_40040784_40041428_40041494_40059333_40059459_40060066_40060171_40061734_40061813_40064226_40064371_40064473_40064560_40066214
H1_mix_00005402	chr1	+	6104	7	NIC	ENSG00000117000.9	novel	6232	8	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_6	33.946035605551	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTTGTTTACTCATAATG	-10	True	NA	7	True	AATAAA	-18	NA	40161372	40240921	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_40161637_40189054_40189210_40190771_40190854_40195631_40195765_40202411_40202615_40222573_40222711_40235791
H1_mix_00005404	chr1	+	2579	6	FSM	ENSG00000187815.10	ENST00000372705.3	2104	6	-475	0	-135	0	multi-exon	FALSE	canonical	2	6	junction_1	11.7303026388921	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAACAGTTTTTTTCTGAT	NA	False	NA	28	True	ATTAAA	-44	NA	40477154	40496288	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_40477895_40479332_40479489_40481762_40481855_40489087_40489215_40489528_40489625_40494920
H1_mix_00005405	chr1	+	2796	6	FSM	ENSG00000187815.10	ENST00000372706.6	2796	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	9.00222194794152	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGATTTGCAGACCAGC	2	True	NA	83	True	AATAAA	-17	NA	40477289	40496343	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_40477895_40479035_40479489_40481762_40481855_40489087_40489215_40489528_40489625_40494920
H1_mix_00005408	chr1	+	1931	4	FSM	ENSG00000164002.12	ENST00000432259.6	1878	4	-53	0	-27	0	multi-exon	FALSE	canonical	2	4	junction_1	7.84573486395988	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGAACTGATGGTTT	NA	False	NA	9	True	AATAAA	-17	NA	40508713	40516036	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_40508890_40509450_40509626_40509732_40509791_40514514
H1_mix_00005409	chr1	+	1911	10	FSM	ENSG00000066136.21	ENST00000456393.6	1911	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	84.0860817008527	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAGAGTCTGGGTTTCT	25	True	NA	22	True	AATAAA	-14	NA	40691742	40771601	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_40691868_40738835_40738949_40747533_40747606_40749572_40749687_40753150_40753247_40758120_40758295_40762887_40763047_40766595_40766704_40769355_40769416_40770711
H1_mix_00005412	chr1	+	3353	11	FSM	ENSG00000117013.17	ENST00000506017.1	3335	11	-18	0	-18	0	multi-exon	TRUE	canonical	3	5	junction_1	5.45985347788748	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGATTGTTCTTGGTTTT	1755	False	NA	8	True	ATTAAA	-13	NA	40818945	40840451	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_40818991_40819346_40819473_40819874_40819986_40820164_40820261_40822313_40822403_40824096_40824259_40831083_40831305_40833013_40833114_40834966_40835099_40837664_40837795_40838310
H1_mix_00005415	chr1	+	5325	9	FSM	ENSG00000171793.16	ENST00000486889.2	5325	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	170.18478009211	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAAGGCAGAACAAGAGAC	5241	False	NA	NA	False	AATAAA	-3	NA	40993852	41012546	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41008658_41008891_41009444_41009590_41010160_41010255_41011657
H1_mix_00005416	chr1	+	1281	3	FSM	ENSG00000127125.9	ENST00000372562.1	966	3	16	-331	16	0	multi-exon	FALSE	canonical	3	14	junction_1	302.5	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGTTTTGTTTTGTTTGA	30	False	NA	38	True	AATAAA	-31	NA	42456132	42460412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_42456500_42457246_42457351_42459602
H1_mix_00005419	chr1	+	633	4	FSM	ENSG00000186409.18	ENST00000657248.1	633	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	1.63299316185545	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAGAAGAAGGCAGGAGGA	NA	False	NA	NA	False	NA	NA	NA	42577061	42590441	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_42577230_42581359_42581515_42589320_42589484_42590294
H1_mix_00005422	chr1	+	770	5	FSM	ENSG00000065978.19	ENST00000467957.1	770	5	0	0	0	0	multi-exon	FALSE	canonical	3	2857	junction_1	200.624493768832	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGACCAGTGAGGCAGAATA	6	True	NA	NA	False	NA	NA	NA	42683155	42697211	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_42683467_42693489_42693524_42696198_42696289_42696641_42696945_42697179
H1_mix_00005424	chr1	+	3456	12	FSM	ENSG00000164010.15	ENST00000372517.8	3440	12	-16	0	-16	0	multi-exon	FALSE	canonical	1	2	junction_6	2.93173009029038	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTGTTATTTTCATTGT	NA	False	NA	21	True	AATAAA	-22	NA	42817105	42844991	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_42817254_42825622_42825739_42830443_42830534_42830767_42831116_42835037_42835155_42835731_42835765_42837157_42837191_42838900_42838922_42840032_42840054_42840151_42840179_42840269_42840297_42842516
H1_mix_00005425	chr1	+	1747	3	NIC	ENSG00000164011.18	novel	1910	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_1	9	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGACCCGTGTACTTAT	-1	True	NA	NA	False	AGTAAA	-12	NA	42846612	42852473	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_42846658_42849564_42849743_42850949
H1_mix_00005427	chr1	+	3044	3	FSM	ENSG00000227533.7	ENST00000416689.2	3106	3	31	31	4	-31	multi-exon	FALSE	canonical	3	6	junction_2	3	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGCTGCCCTCCAGCCTGG	0	True	NA	NA	False	NA	NA	NA	42959103	42976397	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_42959578_42970248_42970395_42973973
H1_mix_00005428	chr1	+	5181	3	Intergenic	novelGene_35	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	8	junction_1	3	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCAGCTCCATAGCCCAT	NA	False	NA	NA	False	NA	NA	NA	43085750	43099100	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_43086070_43091894_43092067_43094410
H1_mix_00005429	chr1	+	534	4	FSM	ENSG00000243710.8	ENST00000529956.5	576	4	42	0	-28	0	multi-exon	FALSE	canonical	1	1	junction_1	0.471404520791032	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCAGGTGTGTGTCACTGG	10	False	NA	NA	False	NA	NA	NA	43172385	43183614	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43172403_43172734_43172911_43181533_43181851_43183590
H1_mix_00005431	chr1	+	3898	23	FSM	ENSG00000066056.14	ENST00000372476.8	3893	23	-12	7	-12	-7	multi-exon	TRUE	canonical	1	1	junction_6	3.03594172354483	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCATTCAATGTCTACC	13	False	NA	-2	True	AATAAA	-11	NA	43300969	43323101	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43301130_43304850_43305166_43305232_43305344_43306839_43306996_43307141_43307274_43307431_43307573_43307795_43307925_43308985_43309132_43309387_43309533_43311670_43311830_43311993_43312132_43312304_43312602_43313134_43313426_43313777_43313969_43317198_43317410_43317563_43317675_43317881_43318073_43319234_43319349_43319458_43319530_43321268_43321310_43321395_43321493_43321615_43321716_43322650
H1_mix_00005432	chr1	+	1213	3	FSM	ENSG00000198198.17	ENST00000638631.1	2574	3	23	1338	23	-1338	multi-exon	FALSE	canonical	3	7	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTATCCTGTCTCTGCTG	6	True	NA	NA	False	NA	NA	NA	43389921	43404613	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43389996_43403176_43403303_43403600
H1_mix_00005433	chr1	+	1601	5	FSM	ENSG00000198198.17	ENST00000357658.4	1601	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	2.87228132326901	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTTAAATCTAAGACCTC	35	False	NA	NA	False	NA	NA	NA	43389950	43410577	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43389996_43403176_43403303_43403600_43403775_43404379_43404551_43409492
H1_mix_00005434	chr1	+	4186	10	FSM	ENSG00000198198.17	ENST00000460536.1	4286	10	100	0	100	0	multi-exon	FALSE	canonical	3	13	junction_6	5.8309518948453	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCATGCTGCTGTCTCTA	NA	False	NA	NA	False	TTTAAA	-34	NA	43445351	43452650	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43445985_43446178_43446260_43446341_43446417_43446954_43447169_43447544_43447699_43447848_43447972_43448078_43448485_43448611_43448729_43450102_43450172_43450336
H1_mix_00005436	chr1	+	7780	34	NNC	ENSG00000142949.17	novel	7720	34	NA	NA	-47	37976	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_33	189.593548146087	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCAGTTTTGTTGATAGC	4772	False	NA	NA	False	AAAAAG	-2	NA	43530828	43661642	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_43531091_43538197_43538278_43545030_43545167_43553491_43553638_43553799_43553942_43569589_43569779_43578809_43578921_43588730_43589001_43590971_43591554_43591811_43591949_43592456_43592602_43597747_43598054_43598719_43598914_43603415_43603534_43603610_43604190_43604902_43605001_43605189_43605444_43605528_43605623_43606239_43606459_43606813_43606969_43609382_43609499_43613617_43613716_43617444_43617569_43617735_43617912_43618629_43618750_43619047_43619203_43619287_43619574_43619679_43619859_43620094_43620222_43620453_43620580_43620837_43620993_43621096_43621233_43621934_43623666_43661608
H1_mix_00005437	chr1	+	7537	32	NIC	ENSG00000142949.17	novel	6377	33	NA	NA	6	-4	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	193.17919088733	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAAACCAGGACTCTGTC	16	True	NA	11	True	AATAAA	-19	NA	43530895	43623659	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_43531091_43538197_43538278_43553491_43553638_43553799_43553942_43569589_43569779_43578809_43578921_43588730_43589001_43590971_43591554_43591811_43591949_43592456_43592602_43597747_43598054_43598719_43598914_43603415_43603534_43603610_43604190_43604902_43605001_43605189_43605444_43605528_43605623_43606239_43606459_43606813_43606969_43609382_43609499_43613617_43613716_43617444_43617569_43617735_43617912_43618629_43618750_43619047_43619203_43619287_43619574_43619679_43619859_43620094_43620222_43620453_43620580_43620837_43620993_43621096_43621233_43621934
H1_mix_00005439	chr1	+	6376	26	NIC	ENSG00000142949.17	novel	4836	25	NA	NA	12	-4	combination_of_known_junctions	FALSE	canonical	3	74	junction_14	246.809452007009	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAAACCAGGACTCTGTC	80	False	NA	11	True	AATAAA	-19	NA	43591032	43623659	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_43591554_43591811_43591949_43592456_43592602_43597747_43598054_43598719_43598914_43603415_43603534_43603610_43604190_43604902_43605001_43605189_43605444_43605528_43605623_43606239_43606459_43606813_43606969_43609382_43609499_43612767_43612801_43613617_43613716_43617444_43617569_43617735_43617912_43618629_43618750_43619047_43619203_43619287_43619574_43619679_43619859_43620094_43620222_43620453_43620580_43620837_43620993_43621096_43621233_43621934
H1_mix_00005445	chr1	+	2641	3	FSM	ENSG00000126091.21	ENST00000495482.2	2593	3	-46	-2	-35	0	multi-exon	FALSE	canonical	3	30	junction_2	4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAGCTCTTCCCTGAGC	3631	False	NA	-10	True	NA	NA	NA	43919066	43931141	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43920551_43920781_43920929_43930131
H1_mix_00005446	chr1	+	1935	3	ISM	ENSG00000117407.17	ENST00000372359.10	1439	5	-46	-4	36	4	intron_retention	FALSE	canonical	3	37	junction_2	26.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTTGTCAGATCCTTT	5	True	NA	34	True	NA	NA	NA	43933754	43937244	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_43933886_43934111_43934261_43935589
H1_mix_00005448	chr1	+	1164	5	NNC	ENSG00000117407.17	novel	1439	5	NA	NA	5	-5	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_4	30.5071712880759	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTACTTCTGTGGCTTGT	14	False	NA	24	True	NA	NA	NA	43933816	43937234	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_43933886_43934111_43934261_43935589_43935717_43936092_43936232_43936554
H1_mix_00005449	chr1	+	471	3	FSM	ENSG00000117407.17	ENST00000479128.5	471	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	6	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCGCAGCCTTCTCGGCCC	392	False	NA	NA	False	NA	NA	NA	43934194	43936346	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43934261_43935589_43935717_43936068
H1_mix_00005452	chr1	+	1201	5	FSM	ENSG00000117408.11	ENST00000372339.3	1201	5	0	0	0	0	multi-exon	TRUE	canonical	3	137	junction_1	5.76085931090146	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGTCTCTGCCTCCTT	1430	False	NA	10	True	AGTAAA	-12	NA	43965938	43967752	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43966642_43966723_43966783_43966929_43967020_43967314_43967497_43967585
H1_mix_00005455	chr1	+	874	4	FSM	ENSG00000132768.14	ENST00000492306.5	851	4	-23	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	158.602928374254	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGGTGCCTTCTATGTAG	0	True	NA	NA	False	NA	NA	NA	43969999	43971540	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43970323_43970595_43970709_43970905_43971190_43971386
H1_mix_00005458	chr1	+	2629	7	FSM	ENSG00000117411.18	ENST00000356836.10	2629	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	243.846718703005	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCTCCCTTGTCTGTTTG	188	False	NA	14	True	AGTAAA	-14	NA	43979876	43991168	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43980615_43981108_43981474_43981688_43981925_43984864_43985056_43985277_43985401_43985516_43985622_43990297
H1_mix_00005463	chr1	+	1563	11	NNC	ENSG00000178028.14	novel	1552	11	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	117.169321923445	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGCTGCTTCCTTTTCCT	-12	True	NA	18	True	AATAGA	-15	NA	44213490	44220673	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_44213550_44213708_44213859_44214349_44214442_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
H1_mix_00005464	chr1	+	1760	10	ISM	ENSG00000187147.18	ENST00000355387.6	3099	15	0	6642	0	0	5prime_fragment	TRUE	canonical	0	0	junction_1	213.653983560705	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGTGTGGGCACAGGCTT	23	True	NA	NA	False	NA	NA	NA	44405193	44645081	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_44405527_44411980_44412723_44614164_44614298_44622741_44622788_44626296_44626399_44632342_44632386_44635544_44635589_44636029_44636163_44644697_44644795_44644994
H1_mix_00005467	chr1	+	876	4	FSM	ENSG00000187147.18	ENST00000488865.2	860	4	-16	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	160.217213668056	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATCCCTCTTAAGGCTG	3	True	NA	19	True	ATTAAA	-22	NA	44631967	44636495	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_44632213_44632342_44632386_44635544_44635667_44636029
H1_mix_00005468	chr1	+	2734	10	FSM	ENSG00000187147.18	ENST00000474064.5	2734	10	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	132.535203802286	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTGTGTTATGTGT	3	True	NA	NA	False	ATTAAA	-16	NA	44631967	44651723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_44632213_44632342_44632386_44635544_44635589_44636029_44636163_44644697_44644795_44644994_44645082_44645220_44645277_44645409_44645489_44649660_44649770_44649882
H1_mix_00005470	chr1	+	1971	11	NNC	ENSG00000187147.18	novel	2734	10	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_7	189.20369975241	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTGCCTGTGTGTTATG	20	False	NA	NA	False	ATTAAA	-13	NA	44631984	44651720	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_44632213_44632342_44632386_44635544_44635589_44636029_44636163_44644697_44644795_44644994_44645082_44645220_44645277_44645406_44645489_44649660_44649770_44649882_44649958_44650703
H1_mix_00005472	chr1	+	823	6	FSM	ENSG00000198520.12	ENST00000441519.5	836	6	13	0	-4	0	multi-exon	FALSE	canonical	1	2	junction_4	1.01980390271856	176	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCATCGTGGACTGCGTGC	-6	True	NA	NA	False	NA	NA	NA	44674734	44704111	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_44674874_44689675_44689904_44697101_44697171_44698062_44698230_44700922_44701120_44704088
H1_mix_00005473	chr1	+	2697	20	NIC	ENSG00000142945.13	novel	2862	21	NA	NA	13	-29	combination_of_known_junctions	FALSE	canonical	3	30	junction_5	105.282577156107	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATCAGCTGTTTAAGT	-5	True	NA	0	True	AATAAA	-8	NA	44739849	44767738	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_44740003_44740912_44741008_44747383_44747486_44747651_44747701_44750441_44750565_44753732_44753834_44754749_44754846_44755928_44755984_44756074_44756238_44757555_44757647_44757907_44757972_44758048_44758141_44759205_44759349_44760279_44760485_44760591_44760703_44761915_44761984_44762345_44762452_44762544_44762659_44766825_44766950_44767096
H1_mix_00005477	chr1	+	664	3	FSM	ENSG00000173846.13	ENST00000461769.1	664	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	5	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAAACTAACCCATC	896	False	NA	NA	False	AATAAA	-1	NA	44804217	44805121	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_44804247_44804338_44804502_44804649
H1_mix_00005478	chr1	+	1124	9	FSM	ENSG00000126088.14	ENST00000636293.1	1102	9	-22	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	287.907510105242	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTGTAGTTTTGTTTG	NA	False	NA	15	True	AATAAA	-16	NA	45012184	45015575	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_45012286_45012906_45013020_45013135_45013216_45013291_45013355_45013593_45013792_45013908_45014071_45014735_45014837_45014939_45015007_45015336
H1_mix_00005484	chr1	+	918	6	FSM	ENSG00000126088.14	ENST00000462688.5	901	6	-17	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	322.658085285337	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGATTGGGATGGGTTG	1	True	NA	NA	False	NA	NA	NA	45012247	45014576	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_45012286_45012856_45013020_45013135_45013355_45013593_45013792_45013908_45014071_45014438
H1_mix_00005491	chr1	+	605	1	FSM	ENSG00000281912.1	ENST00000626198.1	1710	1	-4	1109	-4	-1109	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTGTCTGTACCTGTG	NA	False	NA	NA	False	GGGGCT	-9	NA	45303905	45304510	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_45303900_45304500
H1_mix_00005492	chr1	+	1866	8	NIC	ENSG00000132773.12	novel	2173	8	NA	NA	46	-23	combination_of_known_junctions	FALSE	canonical	3	10	junction_6	30.0326353101667	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATCAACAGAAGCAA	26	False	NA	-5	True	NA	NA	NA	45340266	45343941	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_45340305_45341072_45341216_45341302_45341344_45341472_45341570_45341948_45342108_45342383_45342644_45342734_45343003_45343081
H1_mix_00005493	chr1	+	1448	11	NIC	ENSG00000117448.14	novel	1818	10	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	282	junction_1	485.189911271865	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATATTGCTTGCTTGTCT	-13	True	NA	23	True	AATAAA	-13	NA	45550819	45570045	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_45550877_45550965_45551156_45552435_45552564_45561788_45561879_45566568_45566689_45566868_45567021_45567981_45568178_45568484_45568685_45568926_45569000_45569142_45569230_45569890
H1_mix_00005497	chr1	+	5757	29	NNC	ENSG00000086015.23	novel	5737	29	NA	NA	-26	0	at_least_one_novel_splicesite	TRUE	canonical	2	12	junction_3	51.8192871468545	96	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTATGTCTTTTGCTTGC	-13	True	NA	26	True	AATATA	-16	NA	45803585	46036122	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_45804073_45824432_45824581_45829438_45829582_45882366_45882396_45959385_45959478_45997723_45997800_46002804_46002884_46006240_46006396_46008295_46008372_46010729_46010940_46019595_46019698_46021949_46022083_46022909_46022972_46023232_46023319_46023771_46023981_46025676_46025816_46027730_46027864_46028767_46028934_46029465_46029568_46029830_46029954_46030128_46030239_46030606_46030762_46031006_46031291_46031390_46031586_46032177_46032405_46032595_46032719_46033801_46033939_46034075_46034267_46034537
H1_mix_00005499	chr1	+	676	8	FSM	ENSG00000085999.13	ENST00000469835.6	670	8	-6	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	117.002703614323	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGACAAGGCAGTGGTGGT	6	True	NA	NA	False	NA	NA	NA	46247762	46260879	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_46247802_46248398_46248409_46248511_46248599_46249999_46250120_46258685_46258747_46259963_46260100_46260541_46260612_46260726
H1_mix_00005504	chr1	+	373	2	FSM	ENSG00000117481.11	ENST00000472157.1	364	2	-9	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCCCCCTGCCCACCCCAG	17	True	NA	NA	False	NA	NA	NA	46340819	46341595	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_46340920_46341322
H1_mix_00005506	chr1	+	1998	15	NNC	ENSG00000117480.16	novel	1046	8	NA	NA	-510	-1	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_11	127.327714731615	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCGTCTGTGTGGTTTCT	NA	False	NA	NA	False	AAGAAA	-5	NA	46393806	46413847	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_46393862_46402090_46402205_46405013_46405149_46405371_46405506_46405587_46405795_46406037_46406079_46406243_46406369_46408458_46408585_46409100_46409199_46410397_46410498_46410813_46410855_46411485_46411652_46412142_46412252_46413074_46413221_46413446
H1_mix_00005507	chr1	+	781	5	FSM	ENSG00000117480.16	ENST00000468718.5	769	5	-12	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	171.454075483787	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGGTAAGGTGGGTGGAG	0	True	NA	NA	False	NA	NA	NA	46394316	46405789	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_46394544_46402090_46402205_46405013_46405149_46405371_46405506_46405618
H1_mix_00005510	chr1	+	4853	6	FSM	ENSG00000197587.11	ENST00000360032.4	5050	6	-4	201	-4	-201	multi-exon	FALSE	canonical	1	1	junction_1	7.21110255092798	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACACTGTGTACTGTAT	-4	True	NA	NA	False	NA	NA	NA	46489831	46516015	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_46489878_46490643_46490784_46506998_46507165_46510475_46510655_46510934_46511284_46512042
H1_mix_00005512	chr1	+	250	2	Genic_Genomic	ENSG00000279096.2	novel	2640	1	NA	NA	0	91696	multi-exon	TRUE	non_canonical	0	0	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCCTTTCACTGTCAAAG	NA	False	NA	NA	False	NA	NA	NA	48102067	48196432	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_+_48102093_48196207
H1_mix_00005514	chr1	+	235	1	Intergenic	novelGene_38	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTAGTTGAGAACGGTGA	NA	False	NA	NA	False	TATAAA	-31	NA	48209688	48209923	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_48209700_48209900
H1_mix_00005515	chr1	+	4307	15	NNC	ENSG00000117834.13	novel	3272	15	NA	NA	-11260	0	intron_retention	FALSE	canonical	2	20	junction_8	26.6872475851945	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTTCTCCATGGTCCTGG	NA	False	NA	22	True	AATAAA	-16	NA	48211424	48248638	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_48212326_48222663_48222899_48224723_48224796_48228849_48228955_48229102_48229460_48230599_48230706_48231544_48231626_48231945_48232152_48232366_48232503_48233654_48233763_48235728_48235880_48237678_48237848_48239321_48239538_48242456_48242617_48247334
H1_mix_00005516	chr1	+	2219	15	FSM	ENSG00000117834.13	ENST00000533824.5	2219	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	31.1068763314808	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACAGGCTCTCCTCTTA	NA	False	NA	NA	False	ATTAAA	-24	NA	48222684	48247601	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_48222899_48224723_48224796_48228849_48228955_48229102_48229166_48229294_48229460_48230599_48230706_48231544_48231626_48231945_48232152_48232366_48232503_48233654_48233763_48235728_48235880_48237678_48237848_48239321_48239538_48242456_48242617_48247334
H1_mix_00005517	chr1	+	3791	12	FSM	ENSG00000117834.13	ENST00000493837.6	3769	12	-22	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	29.7721373987367	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCATGGTCCTGGTAGAC	NA	False	NA	27	True	AATAAA	-21	NA	48222684	48248643	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_48222899_48224723_48224796_48228849_48229460_48230666_48230706_48231544_48232152_48232366_48232503_48233654_48233763_48235728_48235880_48237678_48237848_48239321_48239538_48242456_48242617_48247334
H1_mix_00005519	chr1	+	3953	7	FSM	ENSG00000162374.18	ENST00000371824.7	3965	7	12	0	12	0	multi-exon	FALSE	canonical	1	1	junction_1	5.46707315561891	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGACTTCCCAAATTTTTA	-3	True	NA	9	True	AATAAA	-20	NA	50108931	50203772	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_50109199_50144956_50145198_50177088_50177193_50193764_50193919_50195560_50195787_50197428_50197468_50200850
H1_mix_00005521	chr1	+	326	1	FSM	ENSG00000230585.2	ENST00000453979.2	811	1	4	481	4	-481	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACTATGATGAGCATGTG	59	False	NA	NA	False	NA	NA	NA	50780343	50780669	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_50780300_50780700
H1_mix_00005522	chr1	+	249	1	FSM	ENSG00000232027.2	ENST00000422197.2	955	1	177	529	177	-529	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGTGCTCCAACCTCAAA	NA	False	NA	NA	False	GGGGCT	-41	NA	51372446	51372695	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_51372400_51372700
H1_mix_00005524	chr1	+	2826	22	NIC	ENSG00000117859.19	novel	2940	24	NA	NA	-4	-2	combination_of_known_splicesites	FALSE	canonical	3	25	junction_6	213.997403930255	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGCATCTTTTATTATC	16	False	NA	18	True	CATAAA	-27	NA	51617104	51788467	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_51617222_51651990_51652042_51669433_51669513_51714002_51714080_51745535_51745632_51746709_51746758_51750144_51750196_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
H1_mix_00005529	chr1	+	3375	15	FSM	ENSG00000117859.19	ENST00000475697.5	3375	15	0	0	0	0	multi-exon	FALSE	canonical	3	468	junction_8	70.1821245919849	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATCTTTTATTATCTT	NA	False	NA	20	True	CATAAA	-29	NA	51759623	51788469	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
H1_mix_00005531	chr1	+	4971	18	FSM	ENSG00000157077.16	ENST00000357206.6	4567	18	-285	-119	0	0	multi-exon	FALSE	canonical	3	5	junction_5	3.64800746675615	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTGCACTCTTTGTACA	-13	True	NA	3	True	AATAAA	-14	NA	52142088	52346634	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_52142404_52216368_52216475_52233170_52233277_52237487_52239596_52263772_52263873_52268462_52268633_52274463_52274585_52278491_52278615_52281660_52281817_52293452_52293678_52295894_52295978_52303820_52303926_52332767_52332919_52334687_52334769_52337771_52337935_52340125_52340232_52344767_52344945_52346059
H1_mix_00005534	chr1	+	3934	3	FSM	ENSG00000116171.19	ENST00000488965.1	3926	3	-8	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	443	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTTGTTTTTACTGTGT	6	True	NA	19	True	ATTAAA	-16	NA	53014965	53051610	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_53015044_53027968_53028072_53047857
H1_mix_00005536	chr1	+	614	2	FSM	ENSG00000228838.1	ENST00000421637.1	675	2	42	19	42	-19	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTGCAGGGCAAGGAAGAG	NA	False	NA	NA	False	NA	NA	NA	53288065	53289687	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_53288433_53289440
H1_mix_00005539	chr1	+	3989	1	FSM	ENSG00000198711.5	ENST00000361350.5	2624	1	-1454	89	-1454	-89	mono-exon	FALSE	NA	NA	NA	NA	NA	249	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCCAAGAGTTAATCACTT	5259	False	NA	NA	False	NA	NA	NA	54234985	54238974	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_54235000_54239000
H1_mix_00005540	chr1	+	3503	15	FSM	ENSG00000162390.18	ENST00000481208.5	2875	15	-360	-268	-360	63	multi-exon	FALSE	canonical	3	8	junction_2	4.7056197405716	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAAGGGTAGACCTTACC	NA	False	NA	68	True	NA	NA	NA	54541896	54610392	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_54542438_54584654_54584863_54592545_54592607_54593940_54594040_54594555_54594692_54597258_54597416_54599295_54599416_54601268_54601414_54602668_54602725_54603870_54603938_54604345_54604430_54605075_54605210_54607133_54607266_54607941_54608069_54608956
H1_mix_00005542	chr1	+	1887	9	NIC	ENSG00000243725.7	novel	2356	10	NA	NA	29	-1	intron_retention	FALSE	canonical	3	27	junction_7	83.1977125586996	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTAGCTGTGTGACTT	32	False	NA	13	True	NA	NA	NA	54715896	54742306	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_54716020_54716599_54716718_54717491_54717654_54721162_54721241_54722674_54722800_54728345_54728433_54731485_54731701_54737581_54737665_54741410
H1_mix_00005544	chr1	+	834	3	NNC	ENSG00000143001.5	novel	1256	3	NA	NA	8	-2	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_1	2.5	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTCACGACTCTATGAGT	7	True	NA	3	True	AATAAA	-14	NA	54980635	54992286	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_54980669_54986096_54986447_54991835
H1_mix_00005545	chr1	+	3476	11	NIC	ENSG00000169174.11	novel	3637	12	NA	NA	19	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_4	79.2306127705699	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCATAGACTTGACTG	24	True	NA	19	True	AATAAA	-22	NA	55039566	55064852	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_55040045_55043842_55044035_55046522_55046647_55052277_55052412_55055992_55056190_55057330_55057515_55058035_55058210_55058498_55058648_55059485_55059664_55061374_55061557_55063368
H1_mix_00005546	chr1	+	534	2	FSM	ENSG00000223956.4	ENST00000670778.1	850	2	308	8	183	-8	multi-exon	FALSE	canonical	3	6	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTTCAAGCCAGTGTGA	219	False	NA	-6	True	AATAAA	-8	NA	56415246	56415952	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_56415610_56415781
H1_mix_00005547	chr1	+	681	5	FSM	ENSG00000172456.18	ENST00000413489.5	681	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	11.9687092035858	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTTAATTACAAGTTGG	-14	True	NA	NA	False	NA	NA	NA	59296794	59378837	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_59296908_59321535_59321751_59339957_59340070_59346246_59346399_59378748
H1_mix_00005548	chr1	+	1712	15	NIC	ENSG00000172456.18	novel	4072	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	15.7546559363723	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAGAGTCTTCATTTCAA	-14	True	NA	12	True	AATAAA	-23	NA	59296794	59762728	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_59296908_59339957_59340070_59346246_59346399_59378748_59378838_59456960_59457077_59512310_59512440_59554123_59554228_59607802_59607911_59625987_59626050_59638227_59638376_59660218_59660294_59667282_59667404_59674038_59674134_59757930_59757993_59762502
H1_mix_00005550	chr1	+	667	6	FSM	ENSG00000172456.18	ENST00000493891.5	669	6	0	2	0	0	multi-exon	FALSE	canonical	1	7	junction_4	25.6670995634489	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAGAGTCTTCATTTCAA	NA	False	NA	12	True	AATAAA	-23	NA	59626014	59762728	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_59626050_59638227_59638376_59660218_59660294_59667282_59667404_59757930_59757993_59762502
H1_mix_00005553	chr1	+	8160	43	FSM	ENSG00000132849.22	ENST00000371158.6	8505	43	-71	416	-71	0	multi-exon	FALSE	canonical	3	32	junction_42	13.6759550317975	1030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATTGTTGTGGTGTTTCT	104	False	NA	NA	False	ATTAAA	-18	NA	61742405	62163504	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_61742556_61762857_61762915_61763012_61763180_61766278_61766474_61769282_61769423_61771430_61771627_61775205_61775335_61787753_61787973_61791347_61791448_61795466_61795559_61797286_61797429_61801622_61801770_61805447_61805525_61808473_61808531_61822944_61823080_61827421_61827584_61833653_61833786_61856029_61856240_61861550_61861668_61864237_61864634_61875242_61875367_61884236_61884409_61899582_61899655_61901281_61901460_61908371_61908483_61914586_61914665_61927729_61927830_61990167_61990365_62017855_62017948_62037976_62038050_62050965_62051059_62079449_62079568_62084514_62084649_62108436_62108521_62114052_62114247_62116531_62116680_62117131_62117219_62121180_62121296_62123020_62123059_62127971_62128095_62128840_62128946_62148283_62148391_62160907
H1_mix_00005557	chr1	+	1312	10	NIC	ENSG00000132849.22	novel	1585	12	NA	NA	12	-87	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	33.432445245027	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCTAATGTACAGCATAT	20	False	NA	6	True	AATAAA	-17	NA	61952323	62117306	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_61952412_61990167_61990365_62017855_62017948_62037976_62038050_62050965_62051059_62079449_62079568_62084514_62084649_62114052_62114247_62116531_62116680_62117131
H1_mix_00005558	chr1	+	300	1	FSM	ENSG00000242860.3	ENST00000466769.3	294	1	-83	77	-83	-77	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTGATTAGCAGTGAGA	9976	False	NA	NA	False	AAAAAG	-44	NA	62072364	62072664	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_62072400_62072700
H1_mix_00005560	chr1	+	619	5	FSM	ENSG00000125703.15	ENST00000443289.5	603	5	-16	0	-13	0	multi-exon	FALSE	canonical	3	8	junction_1	124.740731118589	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGTCAAAAAATTTACTG	9	False	NA	NA	False	NA	NA	NA	62784118	62819065	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_62784274_62803777_62803863_62805171_62805256_62816574_62816809_62819004
H1_mix_00005561	chr1	+	2701	12	NNC	ENSG00000125703.15	novel	2944	11	NA	NA	10	22330	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	89.8172616809696	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCCCTTCTTCTATTTGT	-6	True	NA	NA	False	NA	NA	NA	62784144	62887846	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_62784274_62803718_62803863_62805171_62805256_62816574_62816809_62819004_62819336_62821138_62821210_62829039_62829177_62834037_62834117_62834775_62834853_62841427_62841548_62863991_62865262_62887821
H1_mix_00005563	chr1	+	915	5	FSM	ENSG00000088035.18	ENST00000465969.5	915	5	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	41.7215471908701	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTTCAATTTTTAAGAA	2475	False	NA	NA	False	NA	NA	NA	63413655	63429126	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_63414147_63415872_63415958_63419369_63419441_63428732_63428802_63428927
H1_mix_00005569	chr1	+	4398	12	FSM	ENSG00000162437.14	ENST00000294428.7	4398	12	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_6	28.8856394301607	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCTTTAGTATATTTAT	-29	True	NA	18	True	ATTAAA	-15	NA	64745094	64833229	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_64745422_64768655_64768723_64777622_64778093_64781379_64781572_64789387_64789515_64802975_64803062_64804733_64804839_64804990_64805106_64807205_64807475_64812737_64812850_64814703_64814841_64830838
H1_mix_00005570	chr1	+	2974	3	ISM	ENSG00000162437.14	ENST00000294428.7	4398	12	67199	110	34228	-110	3prime_fragment	FALSE	canonical	3	106	junction_1	4	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAACCCACCCCTTCCTCC	NA	False	NA	27	True	NA	NA	NA	64812293	64833119	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_64812850_64814703_64814841_64830838
H1_mix_00005573	chr1	+	4987	19	NNC	ENSG00000116678.20	novel	2805	18	NA	NA	-8222	7	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	7.88438838762485	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGATGTACATTTGTCTT	NA	False	NA	0	True	TATAAA	-3	NA	65517466	65635416	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_65517496_65565545_65565606_65570472_65570803_65572325_65572450_65592656_65592866_65596447_65596594_65598659_65598805_65601391_65601683_65601842_65601961_65605037_65605238_65608752_65608902_65609946_65610107_65610213_65610297_65616007_65616225_65617963_65618147_65619927_65620024_65621352_65621459_65622905_65622982_65633151
H1_mix_00005574	chr1	+	2031	10	FSM	ENSG00000184588.18	ENST00000480109.2	2037	10	6	0	6	0	multi-exon	FALSE	canonical	3	6	junction_1	13.3869293171814	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCAGCCCACCATGGGGG	0	True	NA	NA	False	NA	NA	NA	66354387	66372738	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_66354895_66355526_66355621_66361614_66361794_66363167_66363267_66363406_66363572_66365666_66365767_66367695_66367851_66367942_66368066_66368786_66368970_66372312
H1_mix_00005576	chr1	+	3551	15	Fusion	ENSG00000198160.15_ENSG00000289394.1	novel	473	2	NA	NA	-18	0	intron_retention	FALSE	canonical	3	8	junction_1	43.8104101877205	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATGTACATTCACTGTT	12	True	NA	NA	False	NA	NA	NA	66925308	66986670	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_+_66925382_66926141_66926243_66928886_66928964_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087_66963161_66970807_66970960_66971654_66971737_66972896_66972992_66976594_66976723_66981778_66981919_66984571
H1_mix_00005578	chr1	+	1648	14	FSM	ENSG00000198160.15	ENST00000401042.7	1648	14	0	0	0	0	multi-exon	FALSE	canonical	2	65	junction_1	20.0673422468465	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATGTACATTCACTGTT	-24	True	NA	NA	False	NA	NA	NA	66930242	66986670	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_66930401_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087_66963161_66970807_66970960_66971654_66971737_66972896_66972992_66976594_66976723_66981778_66981919_66984571_66984593_66986402
H1_mix_00005579	chr1	+	1826	1	NIC	ENSG00000198160.15	novel	3595	14	NA	NA	26943	-351	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTGTGAATATTTTCAT	15	False	NA	22	True	ATTAAA	-31	NA	66985853	66987679	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_66985900_66987700
H1_mix_00005580	chr1	+	666	5	FSM	ENSG00000081985.13	ENST00000441640.4	697	5	0	31	0	-31	multi-exon	FALSE	canonical	2	4	junction_3	2.8613807855649	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAGGGAATAAAACTGAAG	NA	False	NA	NA	False	NA	NA	NA	67326768	67338729	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_67326850_67328199_67328385_67329586_67329730_67330659_67330811_67338623
H1_mix_00005581	chr1	+	1191	3	FSM	ENSG00000234264.1	ENST00000428732.1	1247	3	18	38	18	-38	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCCCCAAATCACATTAAAA	NA	False	NA	NA	False	AATAAA	-22	NA	68496693	68538589	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_68496772_68529324_68529480_68537631
H1_mix_00005582	chr1	+	7240	13	NIC	ENSG00000116754.14	novel	3784	13	NA	NA	3	0	intron_retention	FALSE	canonical	3	213	junction_3	351.428987611058	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTCCTTATTTATTT	-28	True	NA	20	True	AATAAA	-21	NA	70205684	70253052	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_70205781_70221614_70221840_70228421_70231976_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364_70250504_70250607
H1_mix_00005583	chr1	+	1605	2	Intergenic	novelGene_56	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGATTGGTTATATTTAT	5149	False	NA	NA	False	AATAAA	-22	NA	70214930	70217738	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_70216345_70217547
H1_mix_00005584	chr1	+	1408	11	ISM	ENSG00000116754.14	ENST00000395136.7	1717	12	0	413	0	-333	5prime_fragment	FALSE	canonical	3	44	junction_9	345.196306469232	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAAAGAAAGAAGTAGGGA	27	False	NA	-6	True	CATAAA	-22	NA	70221395	70250392	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249930_70250048_70250364
H1_mix_00005585	chr1	+	668	3	FSM	ENSG00000116754.14	ENST00000469170.5	668	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	546.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAGTTTAATTGTATTA	-6	True	NA	NA	False	NA	NA	NA	70221479	70231268	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_70221840_70228421_70228556_70231094
H1_mix_00005586	chr1	+	3973	13	NIC	ENSG00000116754.14	novel	2285	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_2	408.178984433708	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTCCTTATTTATTT	-6	True	NA	20	True	AATAAA	-21	NA	70221479	70253052	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_70221840_70228421_70228556_70231858_70231976_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364_70250504_70250610
H1_mix_00005589	chr1	+	3224	11	NIC	ENSG00000116754.14	novel	1559	13	NA	NA	-172	-19	intron_retention	FALSE	canonical	3	31	junction_7	456.403560459381	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTATCTTAAAGGAAAAAAAG	274	False	NA	NA	False	NA	NA	NA	70230987	70251598	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70247116_70247150_70249951_70250048_70250364_70250504_70250607
H1_mix_00005591	chr1	+	852	4	FSM	ENSG00000197568.15	ENST00000463058.6	863	4	11	0	-3	0	multi-exon	FALSE	canonical	3	19	junction_2	7.1336448530109	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-13	True	NA	14	True	ATTAAA	-22	NA	70354808	70368023	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_70355108_70366443_70366538_70366932_70366985_70367616
H1_mix_00005594	chr1	+	212	2	Intergenic	novelGene_57	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGGCTCAGAGGCCTGA	NA	False	NA	NA	False	NA	NA	NA	72980662	72985468	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_72980781_72985374
H1_mix_00005595	chr1	+	225	1	Intergenic	novelGene_63	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTACCTTTACTTCGCA	NA	False	NA	NA	False	NA	NA	NA	72993377	72993602	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_72993400_72993600
H1_mix_00005598	chr1	+	1162	9	NNC	ENSG00000137955.16	novel	1448	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_6	184.238127161562	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGACCGGTATTTTATTT	11	False	NA	12	True	AATAAA	-26	NA	75786242	75794803	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_75786275_75787496_75787605_75789158_75789357_75789951_75790058_75791284_75791338_75791460_75791572_75792196_75792307_75794083_75794234_75794509
H1_mix_00005600	chr1	+	1431	11	NIC	ENSG00000137955.16	novel	2137	10	NA	NA	0	-8	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	210.837970963487	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGTAAAATAAAGACCGGTA	11	False	NA	4	True	AATAAA	-18	NA	75786699	75794795	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_75786798_75787496_75787605_75789158_75789357_75789951_75790058_75790151_75790275_75790445_75790518_75791284_75791338_75791460_75791572_75792180_75792307_75794083_75794234_75794509
H1_mix_00005601	chr1	+	1620	11	NNC	ENSG00000137955.16	novel	2137	10	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	224.374597492675	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTGAAGTCCTGTTATT	11	False	NA	41	True	AATAAA	-26	NA	75786699	75794832	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_75786966_75787496_75787605_75789158_75789357_75789951_75790058_75790151_75790275_75790445_75790518_75791284_75791338_75791460_75791572_75792196_75792307_75794083_75794234_75794509
H1_mix_00005602	chr1	+	1841	11	NIC	ENSG00000137955.16	novel	2137	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_1	214.41679038732	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATAGGTTTGAATATGGT	11	False	NA	27	True	AATAAA	-24	NA	75786699	75795086	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_75786917_75787496_75787605_75789158_75789357_75789951_75790058_75790151_75790275_75790445_75790518_75791284_75791338_75791460_75791572_75792180_75792307_75794083_75794234_75794509
H1_mix_00005604	chr1	+	3077	1	FSM	ENSG00000272855.1	ENST00000608243.1	463	1	-275	-2339	-275	2339	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGAGTTTTGTTGCATTTTT	NA	False	NA	-1	True	AATAAA	-10	NA	76636601	76639678	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_76636600_76639700
H1_mix_00005605	chr1	+	2064	14	NIC	ENSG00000154027.19	novel	3280	14	NA	NA	-108	-15	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	12.7673770665616	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTTCATTCCTTAACAC	12	False	NA	-12	True	AAAACA	-4	NA	77281910	77558714	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_77282374_77286940_77287128_77293864_77293961_77297558_77297729_77297833_77297948_77340376_77340569_77410980_77411072_77417638_77417716_77483316_77483360_77486307_77486353_77518563_77518728_77521826_77521944_77535846_77536039_77558601
H1_mix_00005606	chr1	+	434	2	FSM	ENSG00000154027.19	ENST00000524494.1	598	2	0	164	0	-164	multi-exon	FALSE	canonical	3	57	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTGCCTTTTTAAGCCA	3940	False	NA	NA	False	NA	NA	NA	77297854	77340717	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_77297948_77340376
H1_mix_00005608	chr1	+	3282	13	FSM	ENSG00000162614.19	ENST00000334785.12	3282	13	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	15.6478166741136	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTCTGTATTTTAAGAC	0	True	NA	9	True	AATAAA	-20	NA	77888623	77943895	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_77888760_77916054_77916134_77917565_77917758_77917959_77918039_77918124_77918274_77925187_77925230_77926413_77926612_77926715_77926893_77929315_77929505_77933281_77933480_77935822_77936045_77942022_77942209_77942460
H1_mix_00005611	chr1	+	3101	4	NIC	ENSG00000162616.9	novel	2903	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	58.5168541723	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGTGTGCAAGTTTTTG	13	False	NA	12	True	TATAAA	-16	NA	77979280	78017964	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_77979620_78005079_78005322_78013050_78013620_78016013
H1_mix_00005612	chr1	+	1572	2	Intergenic	novelGene_68	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	17	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATATCTAATTTTGTGAA	NA	False	NA	NA	False	NA	NA	NA	79698422	79704129	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_79699692_79703826
H1_mix_00005613	chr1	+	7665	2	Genic_Genomic	ENSG00000223026.1	novel	308	1	NA	NA	-6159	4015	multi-exon	FALSE	canonical	3	218	junction_1	0	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTTAATGGACTCACAGT	NA	False	NA	NA	False	AATAAA	-36	NA	81245629	81256111	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_+_81247991_81250807
H1_mix_00005616	chr1	+	5501	20	FSM	ENSG00000117114.21	ENST00000319517.10	5479	20	-22	0	-1	0	multi-exon	FALSE	canonical	3	28	junction_1	107.888087086481	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAAATAAAACAT	-2	True	NA	-17	True	NA	NA	NA	81800374	81992196	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_81800513_81836884_81837058_81907016_81907231_81936727_81936838_81942968_81943770_81950188_81950483_81951017_81951122_81951956_81952143_81955876_81956061_81966057_81966184_81966403_81966610_81968025_81968200_81969177_81969388_81970313_81970535_81971851_81971919_81979868_81979961_81981807_81981977_81984582_81984712_81985258_81985356_81990390
H1_mix_00005618	chr1	+	5838	21	FSM	ENSG00000117114.21	ENST00000674209.1	5835	21	-3	0	-1	0	multi-exon	FALSE	canonical	3	28	junction_1	154.233029860662	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGAATTTTTTCAAGTAG	-2	True	NA	-10	True	AGTAAA	-4	NA	81800374	81992404	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_81800513_81836884_81837058_81907016_81907231_81936727_81936838_81942968_81943770_81950188_81950483_81951017_81951122_81951956_81952143_81955876_81956061_81966057_81966184_81966403_81966610_81968025_81968200_81969177_81969388_81970313_81970535_81971851_81971919_81979868_81979961_81981807_81981977_81984582_81984712_81985258_81985356_81986900_81987030_81990390
H1_mix_00005619	chr1	+	5811	22	FSM	ENSG00000117114.21	ENST00000627151.2	5789	22	-22	0	-1	0	multi-exon	FALSE	canonical	1	1	junction_17	186.625031799947	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAACATGTGAACTTTTA	-2	True	NA	8	True	AATAAA	-18	NA	81800374	81992422	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_81800513_81836884_81837058_81907016_81907231_81936727_81936838_81942968_81943770_81950188_81950483_81951017_81951122_81951956_81952143_81952986_81953026_81955876_81956061_81966057_81966184_81966403_81966610_81968025_81968200_81969177_81969388_81970313_81970535_81971851_81971919_81979868_81979961_81980794_81980840_81981807_81981977_81984582_81984712_81985258_81985356_81990390
H1_mix_00005621	chr1	+	5876	21	NNC	ENSG00000117114.21	novel	4278	20	NA	NA	384	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	151.162131501246	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATAATTGTCATTAAAATA	13	False	NA	-24	True	AATAAA	-21	NA	81801381	81991816	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_81802230_81836884_81837058_81907016_81907231_81936727_81936838_81942968_81943770_81950188_81950483_81951017_81951122_81951956_81952143_81955876_81956061_81966057_81966184_81966403_81966610_81968025_81968200_81969177_81969388_81970313_81970535_81971851_81971919_81979868_81979961_81980794_81980840_81981807_81981977_81984582_81984712_81985258_81985356_81990390
H1_mix_00005624	chr1	+	378	3	FSM	ENSG00000162643.13	ENST00000484007.1	447	3	0	69	0	-69	multi-exon	FALSE	canonical	1	1	junction_2	0.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTTAAATTTCAGAAAT	NA	False	NA	NA	False	AAAAAG	-3	NA	85126552	85130112	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_85126716_85128707_85128800_85129989
H1_mix_00005625	chr1	+	2468	4	FSM	ENSG00000142871.18	ENST00000674743.1	2446	4	-22	0	0	0	multi-exon	FALSE	canonical	3	595	junction_2	16.7597401199687	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGATTCTGAAGCTAAA	139	False	NA	-15	True	TTTAAA	-36	NA	85580899	85583930	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_85581048_85581364_85582285_85582415_85582625_85582739
H1_mix_00005626	chr1	+	6775	7	NIC	ENSG00000153936.18	novel	6759	7	NA	NA	-4	9	combination_of_known_junctions	FALSE	canonical	2	9	junction_6	55.1706947169922	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTACTTTTTACTGATT	-74	True	NA	21	True	TATAAA	-12	NA	86914630	87109991	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_86915161_87072933_87073173_87084193_87084280_87092530_87092670_87097837_87097936_87103431_87103590_87104466
H1_mix_00005627	chr1	+	1366	5	FSM	ENSG00000143013.13	ENST00000370542.1	1260	5	64	-170	-49	170	multi-exon	FALSE	canonical	2	5	junction_1	75.0345753636282	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTAATGGTGTTTGGGTT	3	True	NA	6	True	AATAAA	-17	NA	87331731	87345578	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_87331815_87332012_87332252_87339535_87339633_87340046_87340203_87344787
H1_mix_00005629	chr1	+	6145	3	ISM	ENSG00000065243.20	ENST00000370521.8	6070	22	145622	-96	-3034	96	3prime_fragment	FALSE	canonical	3	163	junction_1	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTGCAATCATATATTGA	NA	False	NA	NA	False	TATAAA	-44	NA	88829894	88836351	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_88832852_88833076_88833158_88833244
H1_mix_00005630	chr1	+	343	1	FSM	ENSG00000235308.1	ENST00000450381.1	475	1	115	17	115	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	303	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAGGTCATCTTTAACTG	NA	False	NA	NA	False	NA	NA	NA	88923484	88923827	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_88923500_88923800
H1_mix_00005631	chr1	+	615	2	FSM	ENSG00000284734.1	ENST00000641099.1	1602	2	-52	1039	-52	-1039	multi-exon	FALSE	canonical	2	4	junction_1	0	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGGACATGGATGAAACTG	NA	False	NA	NA	False	CATAAA	-24	NA	89198661	89206001	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_89199059_89205783
H1_mix_00005633	chr1	+	3763	3	NNC	ENSG00000171492.14	novel	3950	3	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	113	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTTTTTTGAGGGGTCT	14	True	NA	20	True	ATTAAA	-20	NA	89821044	89936001	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_89821728_89843637_89843783_89933066
H1_mix_00005634	chr1	+	937	2	FSM	ENSG00000171492.14	ENST00000527156.1	922	2	-15	0	-15	0	multi-exon	FALSE	canonical	3	241	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAACATGCTCAAAAGTAG	116	False	NA	NA	False	NA	NA	NA	89843407	89933628	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_89843783_89933066
H1_mix_00005636	chr1	+	3181	12	NNC	ENSG00000097046.13	novel	3215	12	NA	NA	-37	0	at_least_one_novel_splicesite	TRUE	canonical	3	65	junction_1	82.2698643399416	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAGACTACTCATTTGAA	0	True	NA	20	True	AATAAA	-22	NA	91500813	91525764	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_91500878_91501653_91501832_91507853_91507938_91508261_91508398_91511596_91511691_91511780_91511924_91513057_91513308_91513947_91514044_91514818_91514998_91515793_91515877_91520129_91520280_91524040
H1_mix_00005637	chr1	+	4622	9	FSM	ENSG00000189195.15	ENST00000370378.5	4622	9	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_8	2.66634112596269	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATGTAGAGTTTTCTGT	NA	False	NA	4	True	AATAAA	-21	NA	92166984	92184722	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_92167141_92167847_92167986_92168865_92168996_92171398_92171461_92176828_92177547_92177810_92177899_92178311_92178452_92180264_92182596_92183863
H1_mix_00005638	chr1	+	1116	3	FSM	ENSG00000122406.14	ENST00000461952.1	1116	3	0	0	0	0	multi-exon	FALSE	canonical	3	5707	junction_2	165.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTCAGCCAGGTGCCTTC	690	False	NA	NA	False	AATACA	-16	NA	92832761	92836271	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_92833661_92834778_92834914_92836189
H1_mix_00005640	chr1	+	3845	13	FSM	ENSG00000143033.18	ENST00000540243.5	3845	13	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	170.289194378922	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGTTTTGCTTCTGTAT	-8	True	NA	38	True	ATTAAA	-39	NA	93079234	93139079	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_93079532_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93129277_93129449_93133702_93133809_93133927_93133981_93134090_93134196_93136669
H1_mix_00005641	chr1	+	4171	16	NNC	ENSG00000143033.18	novel	4075	15	NA	NA	0	-8	intron_retention	FALSE	canonical	2	8	junction_9	217.824761371766	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAGAGCTAATGAGTTT	-2	True	NA	27	True	ATTAAA	-28	NA	93079282	93139068	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_93079532_93110229_93110429_93110544_93110631_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93120794_93120895_93127231_93127300_93129277_93129449_93133702_93133809_93133927_93133981_93134090_93134196_93136669
H1_mix_00005642	chr1	+	2008	14	FSM	ENSG00000143033.18	ENST00000370303.4	1951	14	-76	19	0	0	multi-exon	FALSE	canonical	0	0	junction_3	200.591049727472	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTCAAAAAAATTCAAAAAAG	-8	True	NA	31	True	NA	NA	NA	93079234	93137132	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_93079532_93110229_93110429_93110544_93110627_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93133702_93133809_93133927_93133981_93134090_93134196_93136669
H1_mix_00005643	chr1	+	3797	13	NIC	ENSG00000143033.18	novel	1951	14	NA	NA	7	-8	intron_retention	FALSE	canonical	2	7	junction_9	196.484997306834	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAGAGCTAATGAGTTT	33	False	NA	27	True	ATTAAA	-28	NA	93079317	93139068	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_93079532_93110229_93110429_93110544_93110631_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93133702_93133809_93133927_93133981_93134090_93134196_93136669
H1_mix_00005649	chr1	+	4787	29	FSM	ENSG00000122483.18	ENST00000370276.6	4779	29	-8	0	0	0	multi-exon	FALSE	canonical	3	13	junction_27	23.6506245333253	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTACATTGAGGAATGCA	4	True	NA	NA	False	TATAAA	-19	NA	93180715	93278730	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_93180883_93183359_93183496_93183977_93184147_93186344_93186504_93191999_93192107_93193615_93193745_93201891_93201989_93205509_93205632_93207106_93207399_93210801_93210927_93212100_93212262_93214745_93214967_93216635_93216747_93217737_93217870_93221608_93221744_93221858_93221937_93226332_93226450_93232425_93232594_93236247_93236391_93239309_93239474_93239682_93239897_93246104_93246205_93246837_93246955_93254470_93254615_93256334_93256539_93258747_93258886_93264700_93264902_93270346_93270815_93278462
H1_mix_00005650	chr1	+	4518	28	NIC	ENSG00000122483.18	novel	4779	29	NA	NA	0	272	combination_of_known_junctions	FALSE	canonical	3	20	junction_11	17.9276858640193	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATTTTATTAATAAAATC	47	False	NA	-26	True	NA	NA	NA	93180758	93279002	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_93180853_93183359_93183496_93183977_93184147_93186344_93186504_93191999_93192107_93193615_93193745_93201891_93201989_93205509_93205632_93207106_93207399_93210801_93210927_93212100_93212262_93214745_93214967_93216635_93216747_93217737_93217870_93221608_93221744_93221858_93221937_93226332_93226450_93232425_93232594_93236247_93236391_93239309_93239474_93239682_93239897_93246104_93246205_93246837_93246955_93254470_93254615_93256334_93256539_93258747_93258886_93264700_93264902_93278462
H1_mix_00005651	chr1	+	656	4	FSM	ENSG00000137942.18	ENST00000603526.1	656	4	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_2	12.3917535302941	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCGTGGGCCACCCCAGCA	NA	False	NA	NA	False	NA	NA	NA	93543825	93549314	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_93544217_93546841_93546975_93547346_93547442_93549277
H1_mix_00005652	chr1	+	884	9	FSM	ENSG00000117528.14	ENST00000315713.5	884	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_8	36.0899483928697	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTTGTACTTATTGTTT	6	False	NA	NA	False	AATAAA	-23	NA	94418478	94478723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_94418589_94458606_94458644_94464774_94464874_94467918_94468008_94473765_94473836_94475142_94475241_94475613_94475738_94478258_94478316_94478523
H1_mix_00005657	chr1	+	1491	8	FSM	ENSG00000271092.5	ENST00000604534.5	1491	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	27.4352670399072	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGGCACATGAGTGT	72	False	NA	NA	False	AATAAA	-19	NA	95117922	95244955	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_95118092_95143890_95144057_95148701_95148792_95150207_95150267_95151324_95151420_95173815_95173890_95230901_95230995_95244210
H1_mix_00005658	chr1	+	1117	3	NIC	ENSG00000122481.17	novel	1078	3	NA	NA	-55	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_2	79	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTTTTCATGTTTGCT	-7	True	NA	16	True	ATTAAA	-16	NA	95234154	95247223	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_95234316_95244210_95244699_95246755
H1_mix_00005659	chr1	+	1305	5	FSM	ENSG00000122481.17	ENST00000495272.5	1294	5	-11	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	96.5789832209886	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGATTTGTTTTCATG	1	True	NA	10	True	ATTAAA	-10	NA	95234209	95247217	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_95234316_95239776_95239910_95244210_95244699_95246541_95246658_95246755
H1_mix_00005660	chr1	+	1127	4	NIC	ENSG00000122481.17	novel	1180	4	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	2	21	junction_2	110.225022365866	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATTTGTTTTCATGTT	1	True	NA	12	True	ATTAAA	-12	NA	95234209	95247219	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_95234316_95244210_95244652_95246541_95246658_95246755
H1_mix_00005665	chr1	+	3057	14	FSM	ENSG00000117569.19	ENST00000370197.5	3057	14	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_8	32.2642565158522	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGAGGTTTGATGGTTG	25	False	NA	9	True	ATTAAA	-19	NA	96721809	96814793	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_96721873_96723563_96723595_96751424_96751501_96769702_96769876_96770707_96770852_96777584_96777750_96777835_96777947_96785058_96785255_96804784_96804940_96806418_96806453_96806865_96806959_96812711_96812929_96813028_96813107_96813272
H1_mix_00005668	chr1	+	1197	1	FSM	ENSG00000228057.1	ENST00000425785.1	1258	1	46	15	46	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGGAAGATGATGACTAA	NA	False	NA	NA	False	NA	NA	NA	97545746	97546943	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_97545700_97546900
H1_mix_00005669	chr1	+	1589	8	FSM	ENSG00000162627.17	ENST00000529992.5	1589	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	162.733662460965	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTTGGCTGCAGTGTA	14	True	NA	11	True	AATAAA	-13	NA	98661700	98760498	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_98661912_98684884_98685068_98691074_98691186_98695517_98695717_98698705_98698906_98701816_98701904_98738236_98738390_98760053
H1_mix_00005671	chr1	+	1756	10	NIC	ENSG00000162627.17	novel	1736	9	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_2	174.401056175305	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTGGCTGCAGTGTATT	-23	True	NA	13	True	AATAAA	-15	NA	98661820	98760500	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_98661912_98662696_98662817_98684884_98685068_98691074_98691186_98691534_98691700_98695517_98695717_98698705_98698906_98701816_98701904_98738236_98738390_98760053
H1_mix_00005672	chr1	+	2212	9	FSM	ENSG00000162627.17	ENST00000528824.1	1562	9	-652	2	-491	0	multi-exon	TRUE	canonical	3	35	junction_2	199.140496885993	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTTGGCTGCAGTGTA	NA	False	NA	11	True	AATAAA	-13	NA	98661209	98760498	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_98661912_98662696_98662817_98684884_98685068_98691074_98691186_98691534_98691700_98695517_98695717_98698705_98698906_98701816_98701904_98760053
H1_mix_00005673	chr1	+	7166	34	FSM	ENSG00000162688.17	ENST00000370163.7	7166	34	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	42.1090673575064	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTTGCTTTCATTCAT	-2	True	NA	16	True	AATAAA	-18	NA	99850488	99924020	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_99850619_99850974_99851125_99861502_99861714_99862256_99862424_99864385_99864590_99870399_99870582_99870757_99870870_99874686_99874811_99875153_99875257_99875357_99875456_99876457_99876598_99877640_99877829_99879922_99880047_99880631_99880796_99881075_99881178_99881291_99881448_99881540_99881692_99884119_99884245_99884338_99884452_99884568_99884704_99887977_99888109_99891219_99891357_99891605_99891740_99892431_99892608_99896285_99896389_99900635_99900862_99902682_99902795_99910711_99910848_99912404_99912518_99913526_99913739_99915388_99915487_99916409_99916498_99916597_99916732_99921533
H1_mix_00005674	chr1	+	6923	33	FSM	ENSG00000162688.17	ENST00000370161.6	6923	33	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_1	42.4004348444683	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGCTTTCATTCATAGT	1694	False	NA	19	True	AATAAA	-21	NA	99852669	99924023	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_99852704_99861502_99861714_99862256_99862424_99864385_99864590_99870399_99870582_99870757_99870870_99874686_99874811_99875153_99875257_99875357_99875456_99876457_99876598_99877640_99877829_99879922_99880047_99880631_99880796_99881075_99881178_99881291_99881448_99881540_99881692_99884119_99884245_99884338_99884452_99884568_99884704_99887977_99888109_99891219_99891357_99891605_99891740_99892431_99892608_99896285_99896389_99900635_99900862_99902682_99902795_99910711_99910848_99912404_99912518_99913526_99913739_99915388_99915487_99916409_99916498_99916597_99916732_99921533
H1_mix_00005680	chr1	+	3488	18	FSM	ENSG00000283761.1	ENST00000640357.1	3488	18	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	324.505586134547	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTAAATATTCTGTTAAT	19	False	NA	-27	True	TTTAAA	-40	NA	99970080	100083321	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_99970163_99993536_99993742_99999260_99999416_100007033_100007157_100011364_100011534_100015301_100015421_100017681_100017816_100049908_100050005_100058665_100058729_100059877_100060006_100061834_100061950_100067976_100068196_100068472_100068587_100069613_100069686_100077164_100077278_100078450_100078549_100080495_100080660_100082002
H1_mix_00005682	chr1	+	2615	11	NIC	ENSG00000156875.14	novel	2779	12	NA	NA	27	-65	combination_of_known_splicesites	FALSE	canonical	3	116	junction_7	191.11904666987	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTAAAAGAAATGTAAATAT	17	False	NA	-36	True	TTTAAA	-31	NA	100038121	100083312	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_100038317_100049908_100050005_100058665_100058729_100059877_100060006_100061834_100061950_100067976_100068196_100068472_100068587_100077164_100077278_100078450_100078549_100080495_100080660_100082002
H1_mix_00005683	chr1	+	268	1	FSM	ENSG00000207750.1	ENST00000385017.1	68	1	-205	5	-205	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGCAGTGTGTTATGATA	NA	False	NA	NA	False	NA	NA	NA	100281035	100281303	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_100281000_100281300
H1_mix_00005684	chr1	+	923	1	FSM	ENSG00000162692.12	ENST00000603679.1	3865	1	2948	-6	2948	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTATGTTTATTTATT	1109	False	NA	NA	False	AGTAAA	-23	NA	100738122	100739045	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_100738100_100739000
H1_mix_00005688	chr1	+	1045	5	FSM	ENSG00000233184.8	ENST00000446527.6	1204	5	65	94	9	-22	multi-exon	FALSE	canonical	2	6	junction_2	3.53553390593274	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCATTTTATAATGTATAAA	36	False	NA	-86	True	NA	NA	NA	101025918	101087171	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_101026062_101075394_101075717_101077362_101077509_101083460_101083575_101086851
H1_mix_00005689	chr1	+	2929	2	FSM	ENSG00000170989.10	ENST00000475821.2	825	2	-109	-1995	-109	-4	multi-exon	FALSE	canonical	1	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCCCTTTGTGAAGAGC	-7	True	NA	3	True	AATAAA	-13	NA	101236755	101241514	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_101236992_101238821
H1_mix_00005690	chr1	+	3695	16	NIC	ENSG00000185946.16	novel	3641	16	NA	NA	-26	0	intron_retention	FALSE	canonical	3	24	junction_1	19.553232185214	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTTTGTATTTTTTCTT	NA	False	NA	NA	False	AATAAA	-21	NA	103525664	103555239	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_103525824_103526066_103526263_103527694_103527743_103533738_103533858_103534773_103534858_103535329_103535442_103536125_103536195_103537341_103537485_103541349_103541476_103543295_103543448_103544940_103545103_103546247_103546343_103546976_103547036_103550940_103551074_103551720_103551793_103553273
H1_mix_00005693	chr1	+	1881	16	NIC	ENSG00000185946.16	novel	2144	15	NA	NA	15	-5	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	17.950549357115	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATAGTGTTTGTATTTT	3	True	NA	NA	False	AATAAA	-16	NA	103525713	103555234	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_103525824_103526066_103526263_103527694_103527743_103533738_103533858_103534773_103534858_103535329_103535442_103536125_103536195_103537341_103537485_103541349_103541476_103543295_103543448_103544940_103545103_103546247_103546343_103546976_103547036_103550940_103551074_103551720_103551793_103555033
H1_mix_00005695	chr1	+	1450	1	FSM	ENSG00000232952.1	ENST00000415279.1	1779	1	256	73	256	-73	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACCTGTCTGAGAAATATA	NA	False	NA	NA	False	AAAAAG	-32	NA	105891994	105893444	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_105892000_105893400
H1_mix_00005696	chr1	+	499	1	FSM	ENSG00000260879.1	ENST00000564063.1	1566	1	1060	7	1060	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGATTTATCTTTTTAT	562	False	NA	NA	False	AGTAAA	-10	NA	108200985	108201484	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_108201000_108201500
H1_mix_00005697	chr1	+	389	1	Intergenic	novelGene_81	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCAGCCACCTGTGCATT	248	False	NA	NA	False	NA	NA	NA	108693054	108693443	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_108693100_108693400
H1_mix_00005699	chr1	+	8072	9	FSM	ENSG00000121957.15	ENST00000675776.1	8071	9	-1	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	13.4158255429921	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTAGCTGGGCGTGGT	-16	True	NA	NA	False	ACTAAA	-6	NA	108876980	108909748	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_108877229_108885274_108885579_108896863_108897086_108897491_108897628_108897958_108898102_108898641_108898766_108898878_108898995_108901789_108901946_108903125
H1_mix_00005700	chr1	+	2210	14	NIC	ENSG00000121957.15	novel	2378	15	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	36.1697182835319	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTTTCAGCTGCTATTC	0	True	NA	10	True	AGTAAA	-18	NA	108876996	108924361	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_108877229_108885506_108885579_108896863_108897086_108897491_108897628_108897958_108898102_108898641_108898766_108898878_108898995_108901789_108901946_108903125_108903235_108904124_108904255_108914337_108914409_108918612_108918790_108922416_108922577_108923999
H1_mix_00005703	chr1	+	200	1	FSM	ENSG00000278249.1	ENST00000458748.1	420	1	75	145	75	-145	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCCTTAGGCGGCGGCCA	39	False	NA	NA	False	AATGAA	-44	NA	109100267	109100467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_109100300_109100500
H1_mix_00005705	chr1	+	1967	12	FSM	ENSG00000031698.13	ENST00000369923.4	1882	12	-64	-21	0	0	multi-exon	FALSE	canonical	3	10	junction_9	387.996677160518	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTCTCCCTGATATACAC	-20	True	NA	-4	True	NA	NA	NA	109213917	109238169	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_109214129_109223977_109224049_109228351_109228433_109229413_109229573_109230877_109231022_109231630_109231787_109235209_109235432_109235976_109236107_109236390_109236549_109236804_109236871_109237243_109237374_109237730
H1_mix_00005708	chr1	+	1661	4	FSM	ENSG00000162650.17	ENST00000369869.1	1715	4	0	54	0	16	multi-exon	FALSE	canonical	3	63	junction_3	11.5566238822398	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGCTGCTATGAAAATAT	5596	False	NA	37	True	AAAAAG	-35	NA	109489550	109492750	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_109490129_109490270_109490393_109490921_109491718_109492585
H1_mix_00005709	chr1	+	4877	2	ISM	ENSG00000174151.15	ENST00000310611.8	5009	4	963	-80	947	73	3prime_fragment	FALSE	canonical	3	11	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACAGGGGATCTAAGTC	948	False	NA	101	True	AATAAA	-12	NA	109495061	109500513	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_109495181_109495755
H1_mix_00005710	chr1	+	2261	1	FSM	ENSG00000116337.20	ENST00000673915.1	2221	1	-43	3	-43	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTTTTAATGGCTGTATT	NA	False	NA	NA	False	ATTAAA	-15	NA	109616060	109618321	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_109616100_109618300
H1_mix_00005711	chr1	+	4090	19	FSM	ENSG00000116337.20	ENST00000528667.7	4081	19	-11	2	-5	0	multi-exon	FALSE	canonical	3	10	junction_1	52.0247151616837	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGGCAGGTGGGGTTTC	3567	False	NA	13	True	AATAAA	-13	NA	109619825	109632049	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_109620279_109620913_109621267_109625302_109625434_109625661_109625793_109626159_109626229_109626318_109626428_109626725_109626913_109627174_109627317_109627428_109627519_109627773_109627904_109628082_109628278_109628363_109628496_109628642_109628807_109629108_109629236_109629326_109629491_109629795_109629917_109630232_109630407_109630682_109630794_109630942
H1_mix_00005712	chr1	+	3903	18	FSM	ENSG00000116337.20	ENST00000256578.8	3899	18	0	-4	0	4	multi-exon	FALSE	canonical	3	17	junction_1	39.9882335635048	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGTGGGGTTTCTGTTGG	43	False	NA	19	True	AATAAA	-19	NA	109620653	109632055	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_109621267_109625302_109625434_109625661_109625793_109626159_109626229_109626318_109626428_109626725_109626913_109627174_109627317_109627428_109627519_109627773_109627904_109628082_109628278_109628363_109628496_109628642_109628807_109629108_109629236_109629326_109629491_109629795_109629917_109630232_109630407_109630682_109630794_109630942
H1_mix_00005716	chr1	+	1168	3	FSM	ENSG00000213366.13	ENST00000496578.3	1168	3	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	9.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCTGCACTAAAGCCAGC	2543	False	NA	NA	False	NA	NA	NA	109670658	109675079	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_109671383_109671472_109671584_109674746
H1_mix_00005717	chr1	+	1093	8	NNC	ENSG00000134184.13	novel	1164	8	NA	NA	-491	0	intron_retention	FALSE	canonical	2	6	junction_7	84.2418772200087	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGTGTGTCTTGTCTT	NA	False	NA	NA	False	AGTAAA	-13	NA	109687322	109693745	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_109687388_109687841_109687910_109688169_109688246_109688672_109688738_109689047_109689130_109689224_109689326_109690270_109690367_109693205
H1_mix_00005718	chr1	+	864	8	FSM	ENSG00000134184.13	ENST00000369823.6	852	8	-12	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	70.9958320133323	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTCGTTCCTTTCTCCT	9	True	NA	NA	False	NA	NA	NA	109687816	109693388	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_109687910_109688169_109688246_109688672_109688738_109688990_109689130_109689224_109689326_109690270_109690367_109690453_109690565_109693205
H1_mix_00005719	chr1	+	1051	7	FSM	ENSG00000134184.13	ENST00000349334.7	1028	7	-23	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	71.6674418562727	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGCTGTGTGTCTTGTC	9	True	NA	NA	False	AGTAAA	-11	NA	109687816	109693743	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_109687910_109688169_109688246_109688672_109688738_109689047_109689130_109689224_109689326_109690270_109690367_109693205
H1_mix_00005722	chr1	+	4321	1	FSM	ENSG00000213366.13	ENST00000624726.1	4321	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTGTACTCTTTCTCT	NA	False	NA	9	True	NA	NA	NA	109705230	109709551	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_109705200_109709600
H1_mix_00005724	chr1	+	4011	17	FSM	ENSG00000168710.18	ENST00000359172.3	2503	17	-149	-1359	-149	6	multi-exon	FALSE	canonical	2	5	junction_1	201.30076999356	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCGTATGTGTCATTCTTT	4	False	NA	39	True	ATTAAA	-31	NA	110003981	110023748	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_110004452_110009033_110009146_110011213_110011358_110012361_110012463_110012896_110013000_110014762_110014858_110015424_110015532_110016343_110016461_110016666_110016731_110017494_110017584_110017945_110018017_110018372_110018468_110018551_110018651_110019050_110019120_110019547_110019627_110020730_110020852_110021673
H1_mix_00005728	chr1	+	4139	4	FSM	ENSG00000116396.15	ENST00000438661.3	4139	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	11.8977121983832	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCTGCCTCTGCCTCTCC	-3	True	NA	24	True	AATAAA	-36	NA	110210313	110234044	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_110212178_110222963_110223901_110225974_110226179_110232910
H1_mix_00005729	chr1	+	1955	2	FSM	ENSG00000116396.15	ENST00000489935.1	1955	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTTCCCGAACATCAGAT	599	False	NA	NA	False	NA	NA	NA	110211342	110224083	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_110212178_110222963
H1_mix_00005731	chr1	+	2861	4	Fusion	ENSG00000224699.10_ENSG00000162775.17	novel	1044	3	NA	NA	2521	26301	multi-exon	FALSE	canonical	3	5	junction_3	15.1730755689881	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTGATATACTCTTTTT	1912	False	NA	0	True	AATAAA	-11	NA	110341986	110372982	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_+_110342269_110346307_110347888_110355875_110356032_110372139
H1_mix_00005732	chr1	+	2850	1	FSM	ENSG00000273373.1	ENST00000609909.1	2850	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGCTCTGTGGTAGTCT	NA	False	NA	21	True	AATAAA	-32	NA	110370153	110373003	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_110370200_110373000
H1_mix_00005733	chr1	+	1353	1	FSM	ENSG00000224699.10	ENST00000662452.1	1353	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTACATCCTTTGTAGTA	116	False	NA	NA	False	AATAAA	-22	NA	110407524	110408877	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_110407500_110408900
H1_mix_00005736	chr1	+	2101	3	FSM	ENSG00000134255.15	ENST00000480324.5	2110	3	0	9	0	-9	multi-exon	FALSE	canonical	1	12	junction_1	54	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAGAGATTGAA	182	False	NA	NA	False	NA	NA	NA	111139654	111160961	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_111139762_111147641_111148054_111159379
H1_mix_00005738	chr1	+	5300	4	FSM	ENSG00000134255.15	ENST00000467362.1	5300	4	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_2	9.89949493661167	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATTGTTGTGATGTGTCT	NA	False	NA	7	True	AATAAA	-19	NA	111178213	111185100	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_111182319_111182798_111182958_111183461_111183588_111184190
H1_mix_00005739	chr1	+	766	5	FSM	ENSG00000173947.14	ENST00000369737.4	746	5	-20	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	21.6852484422014	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGAGTTGGGTGATTTCA	-19	True	NA	68	True	NA	NA	NA	111346599	111351563	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_111346672_111346909_111347050_111348515_111348647_111350105_111350224_111351258
H1_mix_00005740	chr1	+	811	1	FSM	ENSG00000233337.1	ENST00000436366.1	524	1	-186	-101	-186	101	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTCCCTGGATTGCAGC	NA	False	NA	NA	False	AAAACA	-37	NA	111437327	111438138	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_111437300_111438100
H1_mix_00005742	chr1	+	3524	7	FSM	ENSG00000064703.13	ENST00000681529.1	3522	7	-2	0	0	0	multi-exon	FALSE	canonical	3	209	junction_5	30.7571129984594	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTACTTAAAAACAATAAAAG	-10	True	NA	-28	True	AAAAAG	-18	NA	111755900	111767224	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_111756226_111756645_111756741_111759399_111759569_111760473_111760589_111760705_111761285_111762254_111763008_111765736
H1_mix_00005743	chr1	+	5418	3	FSM	ENSG00000116489.13	ENST00000485542.5	739	3	0	-4679	0	4679	multi-exon	FALSE	canonical	3	1216	junction_1	45	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCAGAGAGTGTTTTCTT	21	False	NA	NA	False	NA	NA	NA	112619804	112654692	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_112619884_112647209_112647274_112649417
H1_mix_00005744	chr1	+	4711	18	FSM	ENSG00000155363.19	ENST00000468624.5	4689	18	-22	0	0	0	multi-exon	TRUE	canonical	3	57	junction_1	153.25914909723	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTATGCAAAAGCCTTGA	-2	True	NA	19	True	AAGAAA	-20	NA	112674697	112700726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_112674730_112674831_112675050_112688934_112689139_112689414_112689651_112689839_112690099_112691664_112691800_112692760_112692930_112694017_112694173_112694452_112694630_112694748_112694897_112695415_112695575_112696147_112696252_112696436_112696535_112696629_112696847_112697993_112698112_112698286_112699811_112699893_112700341_112700415
H1_mix_00005756	chr1	+	776	4	FSM	ENSG00000198765.12	ENST00000477590.1	800	4	0	24	0	-24	multi-exon	FALSE	canonical	1	1	junction_2	1.24721912892465	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTTTATTCTTTACTAT	NA	False	NA	NA	False	NA	NA	NA	114977556	114995330	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_114977617_114981335_114981513_114994697_114994788_114994881
H1_mix_00005757	chr1	+	4586	12	FSM	ENSG00000163393.13	ENST00000369503.9	4705	12	0	119	0	-119	multi-exon	FALSE	canonical	1	1	junction_5	4.98758789976189	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCTTTATCATTGGTTC	-25	True	NA	NA	False	ATTAAA	-31	NA	115976512	116069935	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_115976715_115992030_115992244_116019581_116019715_116020720_116020886_116026892_116027023_116031365_116031582_116035186_116035328_116037302_116037389_116062761_116062883_116064435_116064509_116066519_116066709_116067018
H1_mix_00005758	chr1	+	644	3	FSM	ENSG00000163399.16	ENST00000491156.1	666	3	0	22	0	-22	multi-exon	FALSE	canonical	3	2123	junction_1	99	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTAAATTATCACGTGGT	574	False	NA	NA	False	NA	NA	NA	116388726	116389918	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_116388773_116388901_116389020_116389438
H1_mix_00005759	chr1	+	611	2	FSM	ENSG00000163399.16	ENST00000479960.1	611	2	0	0	0	0	multi-exon	FALSE	canonical	3	2920	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCACTGTCCCATTACAA	178	False	NA	NA	False	NA	NA	NA	116401129	116402033	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_116401261_116401553
H1_mix_00005762	chr1	+	4189	24	NNC	ENSG00000116830.12	novel	9439	23	NA	NA	13	558	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_23	52.1516619218394	386	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGACTGTATTTCCCAGTT	8	True	NA	NA	False	NA	NA	NA	117060338	117102920	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_117060375_117060454_117060558_117062386_117062474_117073660_117073728_117074869_117075860_117076179_117076295_117076640_117076824_117077915_117078044_117079567_117079650_117081827_117081948_117084017_117084169_117086416_117086523_117088800_117088983_117090054_117090209_117090531_117090624_117091327_117091411_117091816_117091951_117092730_117092902_117095308_117095368_117096148_117096300_117097350_117097434_117098832_117098908_117101379_117101563_117102266
H1_mix_00005768	chr1	+	1652	10	FSM	ENSG00000092621.13	ENST00000641115.1	1638	10	-14	0	0	0	multi-exon	FALSE	canonical	2	16	junction_8	753.295934830461	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTCTGCACTTTTGTGT	NA	False	NA	15	True	AATAAA	-15	NA	119711883	119744215	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_119712161_119721169_119721322_119723375_119723442_119726850_119726906_119727003_119727103_119734633_119734767_119735294_119735444_119737113_119737267_119742806_119743045_119743885
H1_mix_00005771	chr1	+	1754	4	FSM	ENSG00000092621.13	ENST00000482968.1	1754	4	0	0	0	0	multi-exon	FALSE	canonical	3	2351	junction_2	97.1916777415753	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTCTGCACTTTTGT	NA	False	NA	13	True	AATAAA	-13	NA	119739461	119744213	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_119740519_119741766_119741898_119742806_119743045_119743885
H1_mix_00005776	chr1	+	2391	5	NIC	ENSG00000273136.8	novel	5270	27	NA	NA	16387	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_4	18.6882315910308	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGACTTTTGGATTGTT	NA	False	NA	3	True	ATTAAA	-15	NA	120830292	120842110	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_120830589_120838050_120838103_120838744_120838918_120839631_120839741_120840349
H1_mix_00005777	chr1	+	3018	11	NIC	ENSG00000273136.8	novel	3671	22	NA	NA	16571	79	combination_of_known_splicesites	FALSE	canonical	3	14	junction_10	40.6650955980679	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATTAATAAAAACATTTCA	NA	False	NA	82	True	NA	NA	NA	120830476	120842189	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_120830589_120831297_120831350_120831987_120832161_120832874_120832984_120833602_120833776_120834494_120834547_120837168_120837342_120838050_120838103_120838744_120838918_120839631_120839741_120840349
H1_mix_00005778	chr1	+	302	1	FSM	ENSG00000277610.1	ENST00000612985.1	164	1	-6	-132	-6	132	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTCTCACGCTTGTAATC	1	True	NA	60	True	AGTAAA	-20	NA	120942593	120942895	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_120942600_120942900
H1_mix_00005780	chr1	+	410	2	Intergenic	novelGene_96	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	67	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTTAGTTTATATAATTT	NA	False	NA	NA	False	ATTAAA	-43	NA	143327632	143331434	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_143327692_143331083
H1_mix_00005787	chr1	+	1684	1	Intergenic	novelGene_102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTAGAATTCCCGGAGC	1013	False	NA	NA	False	NA	NA	NA	145233923	145235607	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_145233900_145235600
H1_mix_00005788	chr1	+	2145	1	FSM	ENSG00000234367.1	ENST00000443612.1	402	1	-1659	-84	-1659	84	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTACCCCACACACCTTA	NA	False	NA	NA	False	NA	NA	NA	145406112	145408257	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_145406100_145408300
H1_mix_00005791	chr1	+	1037	6	FSM	ENSG00000186364.12	ENST00000477878.5	1028	6	-9	0	-6	0	multi-exon	FALSE	canonical	3	13	junction_1	6.08604962188118	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGGTAAAAGTGAAAAAGGA	4	True	NA	NA	False	NA	NA	NA	145845623	145848261	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_145845833_145846012_145846197_145846432_145846691_145847249_145847349_145847582_145847720_145848111
H1_mix_00005796	chr1	+	6600	6	NNC	ENSG00000268043.8	novel	7061	36	NA	NA	-360	-32035	intron_retention	FALSE	canonical	3	26	junction_3	5.00399840127872	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTATTGCCACCCCACT	21	False	NA	NA	False	NA	NA	NA	146938383	146962566	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_146939013_146943290_146943563_146946554_146951490_146959858_146960007_146960108_146960319_146962160
H1_mix_00005798	chr1	+	1398	1	FSM	ENSG00000225603.3	ENST00000435000.2	1665	1	133	134	133	-134	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGATCGTCAGAATTATT	196	False	NA	NA	False	NA	NA	NA	147050949	147052347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_147050900_147052300
H1_mix_00005803	chr1	+	766	7	FSM	ENSG00000188092.15	ENST00000468618.6	750	7	-16	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	100.148916896567	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCATCAGGAAGTGAAAGT	-1	True	NA	NA	False	GATAAA	-15	NA	147928419	147966645	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_147928579_147938713_147938818_147943437_147943545_147943996_147944099_147953344_147953466_147954321_147954403_147966553
H1_mix_00005805	chr1	+	1172	1	FSM	ENSG00000280649.2	ENST00000629247.1	1058	1	-114	0	-114	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGGAGGGGGAGGTCGGC	NA	False	NA	NA	False	NA	NA	NA	148458699	148459871	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_148458700_148459900
H1_mix_00005806	chr1	+	1393	10	FSM	ENSG00000178104.19	ENST00000467859.3	1396	10	0	3	0	-3	multi-exon	FALSE	canonical	3	23	junction_9	53.8917525012345	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATGAAGCCAGAACCATAG	42	False	NA	NA	False	NA	NA	NA	148962571	148989382	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_148962641_148965483_148965643_148966542_148966657_148966838_148966977_148967725_148967906_148968835_148969031_148972179_148972345_148972510_148972593_148974513_148974606_148989183
H1_mix_00005807	chr1	+	927	7	FSM	ENSG00000178104.19	ENST00000530130.2	927	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	6.39444203108363	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGGAGCAGCACCAGTGCC	35	False	NA	NA	False	NA	NA	NA	149017759	149028587	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_149017880_149018541_149018662_149020146_149020337_149021028_149021154_149026714_149026832_149027400_149027628_149028559
H1_mix_00005809	chr1	+	1402	4	Fusion	ENSG00000274265.5_ENSG00000272755.1	novel	1022	3	NA	NA	-1	-5	multi-exon	FALSE	canonical	2	4	junction_3	5.31245915016974	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCCCTGTTTTGGTGATA	15	True	NA	5	True	AATAAA	-16	NA	149176039	149264811	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_+_149176251_149259501_149259610_149262167_149262277_149263837
H1_mix_00005810	chr1	+	651	2	NNC	ENSG00000274265.5	novel	608	3	NA	NA	465	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCCAGGCGTGATGGTAT	539	False	NA	8	True	AATAAA	-31	NA	149177015	149251066	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_149177163_149250562
H1_mix_00005811	chr1	+	1850	5	FSM	ENSG00000286219.2	ENST00000652191.1	1850	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	17.9356488591854	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTAATTTGTTCATTTCA	12	False	NA	NA	False	ATTAAA	-32	NA	149390632	149464958	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_149390923_149430933_149431016_149455317_149455578_149463490_149463827_149464076
H1_mix_00005813	chr1	+	345	3	NIC	ENSG00000271383.8	novel	13941	94	NA	NA	-4776	10304	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTTCAGCAATTGTGGA	NA	False	NA	NA	False	AAGAAA	-38	NA	149495189	149534921	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_149495252_149533924_149534098_149534811
H1_mix_00005814	chr1	+	737	8	NNC	ENSG00000271383.8	novel	13941	94	NA	NA	30829	-10355	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	2.44114392723358	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTTCAGCAATTGTGGA	NA	False	NA	NA	False	AAGAAA	-38	NA	149530794	149544409	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_149530879_149535633_149535727_149536445_149536498_149537099_149537273_149537981_149538034_149538675_149538698_149543434_149543586_149544299
H1_mix_00005815	chr1	+	1897	2	NNC	ENSG00000271383.8	novel	3715	22	NA	NA	54525	826	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTTTTTTTTCCCTAAG	NA	False	NA	NA	False	NA	NA	NA	149554490	149557187	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_149556359_149557158
H1_mix_00005816	chr1	+	1644	3	NIC	ENSG00000277147.7	novel	737	3	NA	NA	273	0	intron_retention	FALSE	canonical	3	39	junction_2	4.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTTTAAAATTACATTGG	342	False	NA	3	True	AATAAA	-17	NA	149606606	149647610	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_149607555_149646598_149647065_149647380
H1_mix_00005817	chr1	+	350	1	FSM	ENSG00000206828.1	ENST00000384101.1	164	1	-3	-183	-3	183	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTAATACCGCTCGAGCT	3	False	NA	111	True	NA	NA	NA	149636762	149637112	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_149636800_149637100
H1_mix_00005818	chr1	+	2271	2	FSM	ENSG00000277147.7	ENST00000651957.1	2306	2	2	33	2	-30	multi-exon	FALSE	canonical	3	4	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTATAAAAAAATAAAATCT	NA	False	NA	NA	False	NA	NA	NA	149701105	149705683	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_149702871_149705177
H1_mix_00005819	chr1	+	3612	1	FSM	ENSG00000220323.4	ENST00000608318.2	3612	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATGTCTTTGATTACAAT	718	False	NA	14	True	AATAAA	-23	NA	149842874	149846486	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_149842900_149846500
H1_mix_00005820	chr1	+	1216	1	FSM	ENSG00000264207.1	ENST00000577853.1	1234	1	29	-11	29	11	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTAATCTCTCCCTTGGA	8690	False	NA	NA	False	TTTAAA	-16	NA	149861299	149862515	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_149861300_149862500
H1_mix_00005825	chr1	+	1626	10	NIC	ENSG00000118298.12	novel	1788	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	101	junction_9	103.983735670299	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCCTATCCTTTGAGG	9	False	NA	28	True	ATTAAA	-15	NA	150257850	150265078	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_150258184_150260150_150260172_150261458_150261639_150262157_150262301_150262524_150262621_150262803_150262871_150263041_150263200_150263298_150263420_150263658_150263680_150264592
H1_mix_00005826	chr1	+	315	4	NIC	ENSG00000118292.9	novel	509	6	NA	NA	36	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_2	131.828170990372	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTTACCATCTACTCCT	33	False	NA	10	True	AATAAA	-16	NA	150272825	150280916	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_150272864_150274086_150274171_150276521_150276633_150280834
H1_mix_00005829	chr1	+	1005	2	FSM	ENSG00000117360.13	ENST00000476970.1	1005	2	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGGAGGTAGGTGATCC	5777	False	NA	NA	False	AAGAAA	-19	NA	150345539	150349209	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_150346492_150349156
H1_mix_00005830	chr1	+	7605	10	FSM	ENSG00000163125.16	ENST00000401000.8	7605	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	18.9665071919352	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGACATTTTTCTTTGA	15	False	NA	15	True	AATAAA	-16	NA	150364649	150476566	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_150364920_150417595_150417726_150440922_150441024_150443230_150443284_150444250_150444378_150446225_150446402_150457287_150457571_150460059_150460318_150464526_150464728_150470560
H1_mix_00005833	chr1	+	4330	1	Genic_Genomic	ENSG00000288880.1	novel	NA	NA	NA	NA	1665	120	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGCCCACAAGTGTGGA	1665	False	NA	75	True	NA	NA	NA	150631516	150635846	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_+_150631500_150635800
H1_mix_00005834	chr1	+	353	3	Intergenic	novelGene_112	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	11	233	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGGAATTCACATCCAGC	NA	False	NA	NA	False	AATAAA	-20	NA	150641682	150643181	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_150641790_150642029_150642087_150642992
H1_mix_00005836	chr1	+	4396	22	NIC	ENSG00000143379.13	novel	4418	22	NA	NA	14	-3	combination_of_known_junctions	FALSE	canonical	2	2	junction_21	16.6283914243244	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAAGATTGTGGTTTTGTT	-15	True	NA	10	True	GATAAA	-1	NA	150926376	150964732	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_150926518_150927703_150927975_150929966_150930119_150939939_150939975_150941328_150941429_150942562_150942689_150942851_150943054_150943919_150943994_150944917_150945109_150946885_150947013_150949121_150949279_150949366_150949526_150950457_150951091_150951364_150951482_150959177_150959348_150960562_150961192_150962129_150962159_150962586_150962720_150962973_150963140_150963529_150963742_150963994_150964084_150964249
H1_mix_00005837	chr1	+	4316	21	NIC	ENSG00000143379.13	novel	4418	22	NA	NA	6	-4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_16	17.5695759766706	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAAGATTGTGGTTTTGT	38	True	NA	9	True	NA	NA	NA	150926429	150964731	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_150926518_150927703_150927975_150929966_150930119_150939939_150939975_150941328_150941429_150942562_150942689_150942851_150943054_150943919_150943994_150944917_150945109_150946885_150947013_150949121_150949279_150949366_150949526_150950457_150951091_150951364_150951482_150959177_150959348_150960562_150961192_150962586_150962720_150962973_150963140_150963529_150963742_150963994_150964084_150964246
H1_mix_00005840	chr1	+	2618	6	FSM	ENSG00000143363.17	ENST00000462440.5	732	6	-30	-1856	0	0	multi-exon	FALSE	canonical	2	5	junction_3	83.9418846583754	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGTCTTACTGTCTT	-32	True	NA	11	True	ATTAAA	-14	NA	151008419	151035711	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_151008672_151017811_151017905_151018556_151018670_151027232_151027328_151028785_151028945_151033805
H1_mix_00005841	chr1	+	2445	5	NIC	ENSG00000143363.17	novel	2788	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_2	76.9654955158479	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTCTTACTGTCTTTT	30	True	NA	13	True	ATTAAA	-16	NA	151008481	151035713	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_151008672_151017811_151017905_151027232_151027328_151028785_151028945_151033805
H1_mix_00005844	chr1	+	3809	16	FSM	ENSG00000143398.20	ENST00000368888.9	3800	16	-9	0	-8	0	multi-exon	FALSE	canonical	3	54	junction_3	172.998599865882	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTATTTTTTCTGATTC	-29	True	NA	36	True	AATAAA	-20	NA	151198542	151249531	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_151199082_151224244_151224280_151224370_151224407_151227319_151227401_151231670_151231802_151232247_151232366_151232550_151232704_151234196_151234497_151236557_151236764_151238181_151238266_151239129_151239179_151239954_151240040_151242122_151242270_151242437_151242568_151246919_151246966_151247862
H1_mix_00005851	chr1	+	899	2	FSM	ENSG00000143373.18	ENST00000443959.1	893	2	-6	0	-6	0	multi-exon	FALSE	canonical	1	2	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTCCTGCTCCTCCCAG	11	False	NA	NA	False	NA	NA	NA	151281611	151286705	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_151282080_151286274
H1_mix_00005852	chr1	+	755	5	FSM	ENSG00000159377.11	ENST00000474100.1	755	5	0	0	0	0	multi-exon	FALSE	canonical	3	1399	junction_4	108.379829765506	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGAGTGGTTTTTGTC	605	False	NA	13	True	AATAAA	-13	NA	151400173	151401936	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_151400188_151400441_151400589_151400763_151400846_151401238_151401631_151401816
H1_mix_00005853	chr1	+	665	3	FSM	ENSG00000159377.11	ENST00000466425.1	665	3	0	0	0	0	multi-exon	FALSE	canonical	3	1399	junction_2	115	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGAGTGGTTTTTGTCT	1332	False	NA	14	True	AATAAA	-14	NA	151400900	151401937	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_151401356_151401541_151401631_151401816
H1_mix_00005854	chr1	+	895	3	FSM	ENSG00000143375.15	ENST00000467998.1	930	3	35	0	35	0	multi-exon	FALSE	canonical	3	318	junction_1	9	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATCAGCAATAAGCTGATA	NA	False	NA	NA	False	GATAAA	-10	NA	151535912	151537502	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_151536346_151536729_151536894_151537204
H1_mix_00005855	chr1	+	1437	11	FSM	ENSG00000143376.14	ENST00000642376.1	1437	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	20.4362423160423	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGAGCCAGGACATTCT	19	False	NA	NA	False	NA	NA	NA	151612005	151693618	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_151612382_151658234_151658428_151660797_151660863_151662165_151662271_151665932_151666012_151668471_151668636_151683355_151683446_151692434_151692585_151692910_151693040_151693423_151693484_151693592
H1_mix_00005856	chr1	+	2457	2	NNC	ENSG00000143376.14	novel	6441	12	NA	NA	-61	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTGGTTTCCTAGACT	NA	False	NA	20	True	AATAAA	-20	NA	151675794	151699080	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_151675823_151696651
H1_mix_00005859	chr1	+	2070	4	NNC	ENSG00000234614.1	novel	506	3	NA	NA	-2953	1246	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	18.9912260443255	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATGTTGGTATTCCTGCT	19	False	NA	95	True	NA	NA	NA	151838923	151851631	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_151839106_151841740_151842032_151844044_151844243_151850232
H1_mix_00005861	chr1	+	3185	21	ISM	ENSG00000169418.10	ENST00000368680.4	4185	22	1671	0	-442	0	3prime_fragment	TRUE	canonical	3	41	junction_8	7.66550715869472	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTCTCTTCTTGAGGGA	70	False	NA	27	True	ATTAAA	-17	NA	153680358	153693992	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_153680701_153681179_153681294_153681703_153681840_153682497_153682590_153683375_153683512_153683739_153683825_153684963_153685085_153685805_153685881_153686122_153686201_153686645_153686751_153687015_153687088_153687199_153687357_153687633_153687790_153688052_153688222_153688952_153689100_153689187_153689312_153689452_153689522_153689805_153689981_153690283_153690383_153693105_153693198_153693351
H1_mix_00005862	chr1	+	3597	31	FSM	ENSG00000143624.14	ENST00000435409.6	3597	31	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	72.0433203010522	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATCAGACCATAGTGGAA	27	False	NA	NA	False	NA	NA	NA	153728090	153773535	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153728212_153728552_153728785_153740650_153740735_153741284_153741369_153746956_153747071_153747278_153747364_153748688_153748756_153751094_153751240_153752278_153752409_153754641_153754740_153757571_153757764_153759525_153759614_153760310_153760391_153760826_153760919_153761569_153761677_153762727_153762848_153763232_153763363_153763831_153763887_153764117_153764222_153764689_153764735_153764943_153765064_153767673_153767828_153768892_153768962_153769768_153769845_153770197_153770312_153770684_153770734_153771795_153771964_153772339_153772441_153772638_153772712_153772924_153773082_153773192
H1_mix_00005865	chr1	+	2396	5	FSM	ENSG00000143554.14	ENST00000483574.6	2396	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	88.423695919137	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGAGCTGATCCAGCTG	282	False	NA	18	True	AATAAA	-4	NA	153775749	153780124	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153776165_153776517_153776728_153777061_153777221_153778160_153779474_153779825
H1_mix_00005866	chr1	+	616	3	FSM	ENSG00000143554.14	ENST00000461269.1	612	3	-4	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGGAACAGGAATTCACT	1128	False	NA	NA	False	NA	NA	NA	153776595	153778085	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153776728_153777061_153777221_153777760
H1_mix_00005870	chr1	+	826	1	FSM	ENSG00000236327.2	ENST00000441288.2	271	1	-573	18	-573	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	529	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACAGACTGGCAAAAAGT	NA	False	NA	NA	False	ATTAAA	-9	NA	153890021	153890847	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153890000_153890800
H1_mix_00005871	chr1	+	1032	3	FSM	ENSG00000284738.2	ENST00000641267.1	1254	3	222	0	184	0	multi-exon	FALSE	canonical	1	2	junction_2	0.5	196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATTTATTTGGTCATTA	179	False	NA	NA	False	TATAAA	-23	NA	153923558	153935240	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153923963_153928634_153928771_153934748
H1_mix_00005873	chr1	+	1760	5	ISM	ENSG00000143578.16	ENST00000468845.1	906	6	2662	-228	2662	0	3prime_fragment	FALSE	canonical	3	151	junction_1	16.6489489157724	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTATCCCAGAAGTTTGAA	3787	False	NA	20	True	AATAAA	-15	NA	153972057	153974359	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_153973079_153973194_153973264_153973379_153973465_153973619_153973717_153973871
H1_mix_00005874	chr1	+	4812	28	NIC	ENSG00000143569.19	novel	3877	27	NA	NA	-54	0	combination_of_known_junctions	TRUE	canonical	3	209	junction_25	356.242580843497	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAGTGGCTTCTTGGATGC	489	False	NA	33	True	AAAACA	-40	NA	154220794	154271509	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_154221041_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154266500_154266569_154268759_154268955_154269361_154269413_154270199
H1_mix_00005875	chr1	+	4134	28	NIC	ENSG00000143569.19	novel	3997	27	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_27	351.968468004075	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAGTGGCTTCTTGGATGC	489	False	NA	33	True	AAAACA	-40	NA	154220794	154271509	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_154221041_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154266500_154266569_154268756_154268955_154269361_154269413_154270880
H1_mix_00005877	chr1	+	4338	27	NIC	ENSG00000143569.19	novel	3877	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	341	junction_26	287.643643045723	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGTGGAAAATGGAGAGGA	579	False	NA	NA	False	AGTAAA	-21	NA	154220884	154271173	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_154221041_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154266500_154266569_154268756_154268955_154270199
H1_mix_00005880	chr1	+	3385	25	NIC	ENSG00000143569.19	novel	3864	26	NA	NA	28	-1	combination_of_known_junctions	FALSE	canonical	3	232	junction_1	250.254866613796	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCGTTCTTTCCGTGC	177	False	NA	26	True	AATAAA	-22	NA	154221355	154263504	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_154221397_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154263102
H1_mix_00005881	chr1	+	4557	27	NIC	ENSG00000143569.19	novel	3864	26	NA	NA	3	-11	combination_of_known_junctions	FALSE	canonical	3	271	junction_26	308.753209503477	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACTACTGTAGTAGTGGC	3337	False	NA	22	True	AATAAA	-35	NA	154225084	154271498	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_154225214_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154266500_154266569_154268756_154268955_154269361_154269413_154270199
H1_mix_00005884	chr1	+	1171	7	FSM	ENSG00000143575.15	ENST00000483970.6	1151	7	-20	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	241.363775704272	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTTGTCTTGGTTTTG	1801	False	NA	27	True	AATAAA	-16	NA	154272588	154275873	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_154272777_154273335_154273599_154273749_154273962_154274949_154275002_154275153_154275261_154275392_154275484_154275615
H1_mix_00005885	chr1	+	842	7	FSM	ENSG00000143575.15	ENST00000447768.6	842	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	243.575735427174	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTTATTCCTGGGACGT	-15	True	NA	NA	False	NA	NA	NA	154272619	154275663	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_154272777_154273335_154273535_154273773_154273962_154274949_154275002_154275153_154275261_154275392_154275484_154275615
H1_mix_00005888	chr1	+	1537	12	FSM	ENSG00000143515.19	ENST00000368487.7	1523	12	-14	0	-14	0	multi-exon	TRUE	canonical	3	23	junction_7	6.28654604349835	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATCTCCTTCCTTCTAGG	1	True	NA	NA	False	AATAAA	-15	NA	154325538	154337846	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_154325703_154328104_154328173_154330395_154330455_154330814_154330929_154331047_154331147_154331443_154331506_154331605_154331679_154331953_154332025_154332617_154332698_154334106_154334266_154334502_154334592_154337347
H1_mix_00005889	chr1	+	568	6	FSM	ENSG00000160712.13	ENST00000515190.1	570	6	0	2	0	-2	multi-exon	FALSE	canonical	1	5	junction_1	1.85472369909914	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGATGGGTCCCAGGGGA	2624	False	NA	NA	False	NA	NA	NA	154434652	154454581	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_154434701_154434989_154435157_154435968_154436111_154448124_154448172_154449910_154449981_154454487
H1_mix_00005891	chr1	+	1207	2	FSM	ENSG00000287064.1	ENST00000653192.1	1224	2	17	0	17	0	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGTGTGTCCGGAGCCTCC	16	False	NA	NA	False	NA	NA	NA	154671609	154678345	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_154672085_154677613
H1_mix_00005892	chr1	+	799	1	FSM	ENSG00000271380.1	ENST00000605085.1	799	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCTGGTATAAAAGGTG	-8	True	NA	NA	False	AATAAA	-15	NA	154961824	154962623	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_154961800_154962600
H1_mix_00005893	chr1	+	802	2	FSM	ENSG00000173207.13	ENST00000368436.1	820	2	-2	20	0	-20	multi-exon	FALSE	canonical	3	3587	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTATAGGTTGTACATAGAA	-5	True	NA	NA	False	TATAAA	-42	NA	154974680	154978664	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_154974805_154977986
H1_mix_00005895	chr1	+	1328	3	ISM	ENSG00000160688.19	ENST00000315144.14	1730	8	-156	4099	-135	0	5prime_fragment	FALSE	canonical	3	696	junction_1	100.5	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCATCAGCACTGTGCTA	8111	False	NA	14	True	AATAAA	-18	NA	154983202	154989012	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_154983398_154983841_154984067_154988104
H1_mix_00005896	chr1	+	1826	3	FSM	ENSG00000160688.19	ENST00000368431.7	1803	3	-23	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	332.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCATCAGCACTGTGCTA	-5	True	NA	14	True	AATAAA	-18	NA	154983343	154989012	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_154983398_154983841_154984067_154987465
H1_mix_00005897	chr1	+	2664	4	FSM	ENSG00000160688.19	ENST00000368433.5	2656	4	-8	0	0	0	multi-exon	TRUE	canonical	3	508	junction_2	172.801105963539	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-5	True	NA	NA	False	NA	NA	NA	154983343	154991206	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_154984067_154988104_154988850_154989559_154989708_154990158
H1_mix_00005898	chr1	+	2189	7	FSM	ENSG00000160688.19	ENST00000292180.8	2189	7	0	0	0	0	multi-exon	FALSE	canonical	3	508	junction_2	133.821709748456	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGCTCTAGCTGTGTC	-5	True	NA	22	True	AATAAA	-18	NA	154983343	154993111	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_154984067_154988104_154988850_154989559_154989708_154990158_154990258_154990338_154990529_154992712_154992787_154992901
H1_mix_00005900	chr1	+	3606	4	FSM	ENSG00000160685.14	ENST00000368426.3	3594	4	-12	0	-12	0	multi-exon	FALSE	canonical	3	7	junction_1	13.6381816969859	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTGTGTCCACTTTTGG	-9	True	NA	4	True	AAGAAA	-20	NA	155002644	155018522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155002687_155002842_155002944_155014654_155015815_155016219
H1_mix_00005901	chr1	+	3016	22	FSM	ENSG00000143537.14	ENST00000529473.5	3016	22	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_20	35.0443839086581	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATCTTGGGAGCGTTCCC	-34	True	NA	13	True	AATAAA	-4	NA	155051285	155062758	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155051466_155052670_155052778_155053416_155053494_155053909_155053989_155054149_155054227_155054313_155054507_155055789_155055853_155055931_155056001_155056079_155056250_155056385_155056471_155056952_155057102_155057187_155057363_155057636_155057730_155057850_155058156_155058245_155058442_155058709_155058788_155059901_155059975_155060204_155060344_155060762_155060833_155061903_155062118_155062244_155062370_155062459
H1_mix_00005903	chr1	+	2897	23	FSM	ENSG00000143537.14	ENST00000472434.5	2894	23	-3	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	36.1862719963211	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCGTTCCCCAGAGTTTGT	31	True	NA	23	True	AATAAA	-14	NA	155051350	155062768	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155051466_155052670_155052778_155053416_155053494_155053909_155053989_155054149_155054227_155054313_155054507_155055786_155055853_155055931_155056001_155056079_155056250_155056385_155056471_155056952_155057102_155057187_155057363_155057636_155057730_155057850_155058156_155058245_155058442_155058709_155058788_155059901_155059975_155060204_155060344_155060762_155060833_155061414_155061490_155061903_155061976_155062244_155062370_155062459
H1_mix_00005905	chr1	+	1453	4	FSM	ENSG00000169242.12	ENST00000368406.2	1444	4	-9	0	-9	0	multi-exon	TRUE	canonical	3	8	junction_2	14.1656862405839	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTTTTCTGCCACTCCA	-8	True	NA	32	True	AATAAA	-19	NA	155127866	155134857	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155128070_155131338_155131635_155133729_155133781_155133954
H1_mix_00005910	chr1	+	1749	9	FSM	ENSG00000163462.19	ENST00000543729.5	1703	9	-13	-33	0	33	multi-exon	TRUE	canonical	0	0	junction_8	9.8035389018456	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGGGTATGCCAGGGCCT	2	True	NA	NA	False	NA	NA	NA	155173877	155179968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155174030_155175385_155175648_155175887_155176232_155176931_155177076_155177194_155177291_155178001_155178256_155178491_155178614_155178808_155178847_155179631
H1_mix_00005911	chr1	+	2013	10	FSM	ENSG00000163462.19	ENST00000474430.5	2704	10	-22	713	0	-713	multi-exon	FALSE	canonical	0	0	junction_8	9.2669597608858	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGACCCCTCTGGAAGGG	2	True	NA	NA	False	AAGAAA	-35	NA	155173877	155182149	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155174030_155175385_155175648_155175887_155176232_155176931_155177076_155177194_155177291_155178001_155178256_155178491_155178614_155178808_155178847_155179631_155179935_155181851
H1_mix_00005914	chr1	+	3082	10	FSM	ENSG00000163462.19	ENST00000611379.1	3082	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	8.82896467791953	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAATCATTCCTGTGAGTT	168	False	NA	35	True	AATAAA	-35	NA	155174753	155184971	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155174838_155175385_155175648_155175887_155176232_155176931_155177076_155177194_155177291_155178001_155178256_155178491_155178614_155179631_155179935_155181851_155182150_155183796
H1_mix_00005915	chr1	+	4222	4	NIC	ENSG00000143630.10	novel	3838	8	NA	NA	1029	3	intron_retention	FALSE	canonical	3	15	junction_1	7.40870359029762	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTCTTGGTTTGTGTGT	6099	False	NA	NA	False	TATAAA	-17	NA	155283566	155289851	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_155285312_155285723_155285965_155287172_155287338_155287780
H1_mix_00005916	chr1	+	532	2	FSM	ENSG00000143630.10	ENST00000492035.1	532	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGAAGGACCGCGTTTAC	NA	False	NA	NA	False	NA	NA	NA	155288603	155289518	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155289008_155289390
H1_mix_00005917	chr1	+	938	8	FSM	ENSG00000160752.15	ENST00000468479.5	938	8	0	0	0	0	multi-exon	FALSE	canonical	3	963	junction_1	482.479861057983	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAAGGCAGGAGGCAGT	-5	True	NA	NA	False	NA	NA	NA	155308754	155319688	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155308966_155310063_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610
H1_mix_00005919	chr1	+	1257	10	NIC	ENSG00000160752.15	novel	1478	11	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	99	junction_1	702.720761850539	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGTTCTGTTCTTGCT	65	False	NA	13	True	AATAAA	-16	NA	155308959	155320665	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_155309077_155310042_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
H1_mix_00005922	chr1	+	1200	10	FSM	ENSG00000160752.15	ENST00000612683.1	1198	10	-2	0	0	0	multi-exon	FALSE	canonical	3	271	junction_1	649.315365938959	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTCTCAATAAATAATCGT	73	False	NA	-15	True	NA	NA	NA	155308967	155320637	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155309077_155310063_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
H1_mix_00005923	chr1	+	915	6	FSM	ENSG00000160753.16	ENST00000467820.5	915	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	117.069210298866	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGCCCACCTCAGGCCCC	290	False	NA	NA	False	NA	NA	NA	155323011	155326734	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155323131_155324844_155324944_155325101_155325491_155325566_155325673_155325863_155325911_155326579
H1_mix_00005926	chr1	+	1075	5	FSM	ENSG00000160753.16	ENST00000492536.5	1069	5	-6	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	104.683749932833	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGGCTGGCCCAGAGCCT	5	True	NA	NA	False	NA	NA	NA	155324512	155326815	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155324810_155325101_155325491_155325566_155325673_155325863_155325911_155326579
H1_mix_00005928	chr1	+	1289	1	FSM	ENSG00000237872.4	ENST00000413175.2	1085	1	42	-246	42	246	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAT	77	False	NA	NA	False	AGTAAA	-3	NA	155433219	155434508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155433200_155434500
H1_mix_00005929	chr1	+	465	2	FSM	ENSG00000125459.17	ENST00000471209.1	442	2	-23	0	-9	0	multi-exon	FALSE	canonical	3	206	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCCTGGAGACAGTGAGGA	NA	False	NA	NA	False	NA	NA	NA	155610195	155610752	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155610333_155610424
H1_mix_00005932	chr1	+	537	3	FSM	ENSG00000125459.17	ENST00000482284.5	535	3	-2	0	0	0	multi-exon	FALSE	canonical	3	206	junction_1	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGGCAGGTAAACGGGGAT	4	False	NA	NA	False	NA	NA	NA	155610240	155611347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155610333_155610424_155610561_155611038
H1_mix_00005934	chr1	+	2406	12	FSM	ENSG00000125459.17	ENST00000494995.5	2406	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	77.6489238296374	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTGATTTGCAAAATCTT	4	False	NA	11	True	NA	NA	NA	155610240	155614935	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155610561_155611038_155611109_155611215_155611292_155611739_155611828_155611982_155612101_155612181_155612317_155612417_155612571_155612843_155612976_155613048_155613234_155613424_155613567_155613656_155613767_155614058
H1_mix_00005941	chr1	+	623	3	FSM	ENSG00000116586.12	ENST00000487106.5	623	3	0	0	0	0	multi-exon	FALSE	canonical	3	1602	junction_2	97.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTGGCTACTTTCTT	271	False	NA	37	True	AATAAA	-16	NA	156055084	156058506	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156055426_156057977_156058068_156058314
H1_mix_00005942	chr1	+	462	3	FSM	ENSG00000116586.12	ENST00000463371.1	462	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	781.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTGGCTACTTTCTT	682	False	NA	37	True	AATAAA	-16	NA	156055495	156058506	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156055676_156057977_156058068_156058314
H1_mix_00005943	chr1	+	1079	5	NNC	ENSG00000132698.15	novel	1100	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	69.6109725546196	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGTCATTCCACTGCC	-10	True	NA	25	True	AATAAA	-16	NA	156061159	156070504	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_156061444_156065910_156066086_156068269_156068464_156069670_156069752_156070159
H1_mix_00005944	chr1	+	2349	11	NIC	ENSG00000160789.24	novel	2461	13	NA	NA	210	0	intron_retention	FALSE	canonical	2	34	junction_1	49.0346816039423	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGAATGTTTTGGAACTT	264	False	NA	-6	True	NA	NA	NA	156082840	156137844	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_156083185_156114712_156115275_156130616_156130774_156134402_156134529_156134804_156134976_156135186_156135313_156135900_156136122_156136213_156136437_156136920_156137029_156137112_156137233_156137653
H1_mix_00005946	chr1	+	3655	12	FSM	ENSG00000160789.24	ENST00000675667.1	2826	12	15	-844	15	3	multi-exon	FALSE	canonical	2	8	junction_1	63.1239106771242	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTGCTGTGGTGTCTTT	-4	True	NA	21	True	AATACA	-17	NA	156106712	156140084	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156106824_156114669_156115275_156130616_156130774_156134402_156134529_156134804_156134976_156135186_156135313_156135900_156136122_156136213_156136437_156136920_156137029_156137112_156137233_156137653_156137744_156138487
H1_mix_00005951	chr1	+	553	3	FSM	ENSG00000196189.14	ENST00000470306.5	2405	3	1307	545	-241	-545	multi-exon	FALSE	canonical	3	44	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTTCTCTGGTGCCCAG	127	False	NA	NA	False	NA	NA	NA	156156183	156158486	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156156575_156158069_156158133_156158387
H1_mix_00005952	chr1	+	852	7	FSM	ENSG00000260238.6	ENST00000368276.8	852	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	568.924252915584	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGTGGGGTCCCCATCAT	6	True	NA	-39	True	NA	NA	NA	156213006	156243263	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156213177_156232319_156232426_156233627_156233729_156236348_156236484_156242552_156242592_156242761_156242832_156243032
H1_mix_00005954	chr1	+	282	2	FSM	ENSG00000132677.13	ENST00000622297.1	720	2	435	3	435	-3	multi-exon	FALSE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGACATTGCTGGGCTCT	NA	False	NA	NA	False	NA	NA	NA	156382747	156384600	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156382870_156384440
H1_mix_00005955	chr1	+	921	6	FSM	ENSG00000163382.13	ENST00000368234.7	901	6	-20	0	-14	0	multi-exon	FALSE	canonical	2	33	junction_4	720.630446206653	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAGAACTGTGGATTCC	-40	True	NA	-23	True	AATAAA	-17	NA	156591741	156594131	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156591987_156592100_156592210_156592364_156592476_156592556_156592671_156593463_156593556_156593881
H1_mix_00005957	chr1	+	1192	6	ISM	ENSG00000132692.19	ENST00000329117.10	3297	14	14161	0	-451	0	3prime_fragment	FALSE	canonical	3	9	junction_1	7.863841300535	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGATGCTTCTGTGTGTA	NA	False	NA	8	True	AATAAA	-22	NA	156656277	156659528	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_156656390_156656937_156657097_156657674_156657758_156658126_156658272_156658542_156658734_156659026
H1_mix_00005958	chr1	+	1205	8	NIC	ENSG00000143303.12	novel	2271	8	NA	NA	111	-12	intron_retention	FALSE	canonical	3	17	junction_6	13.1676784249176	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGATATCTGTTTCCTTC	113	False	NA	13	True	ATTAAA	-2	NA	156729070	156736937	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_156729216_156731990_156732116_156732280_156732474_156732984_156733048_156733376_156733521_156734008_156734053_156735724_156735910_156736631
H1_mix_00005960	chr1	+	1476	1	FSM	ENSG00000224520.2	ENST00000414328.2	1447	1	-72	43	-72	-43	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGGAAGCTGGTGTCCGAG	3	True	NA	NA	False	NA	NA	NA	157073184	157074660	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_157073200_157074700
H1_mix_00005962	chr1	+	2694	6	FSM	ENSG00000162734.13	ENST00000368076.1	2694	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	219.953995189903	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATTTTAAAATTTCTGTG	4	True	NA	44	True	AATAAA	-25	NA	160205420	160215376	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_160205523_160207132_160207238_160208463_160208666_160211542_160211717_160213109_160213266_160213421
H1_mix_00005965	chr1	+	779	7	FSM	ENSG00000162736.17	ENST00000421914.5	776	7	-3	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	167.604693649472	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACCTGAGCATCTCCCCT	-2	True	NA	NA	False	NA	NA	NA	160343382	160353237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_160343482_160344721_160344827_160348998_160349123_160349548_160349671_160350104_160350251_160352886_160352992_160353159
H1_mix_00005974	chr1	+	969	7	NIC	ENSG00000143222.12	novel	888	6	NA	NA	-549	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	388.258934217875	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGGTTCTCATTGGGA	NA	False	NA	24	True	AATAAA	-18	NA	161153428	161158856	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_161153458_161153925_161154121_161156949_161157018_161157253_161157318_161157616_161157694_161158120_161158212_161158411
H1_mix_00005978	chr1	+	1750	13	NIC	ENSG00000143224.18	novel	1733	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	99.8810403541244	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTGGCTGTTCTAT	-18	True	NA	10	True	AATAAA	-16	NA	161166438	161171218	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_161166673_161166839_161166935_161167099_161167235_161167338_161167487_161167994_161168128_161168431_161168577_161168992_161169184_161169659_161169721_161169905_161170025_161170408_161170520_161170619_161170770_161170906_161170950_161171033
H1_mix_00005979	chr1	+	945	8	NIC	ENSG00000143224.18	novel	1686	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_4	154.440662933526	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTGGCTGTTCTAT	-10	True	NA	10	True	AATAAA	-16	NA	161166446	161171218	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_161166612_161166839_161166935_161167099_161167235_161169659_161169721_161170408_161170520_161170619_161170770_161170906_161170950_161171033
H1_mix_00005982	chr1	+	1716	13	NIC	ENSG00000143224.18	novel	1667	13	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	116.315752014362	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGCTTGGCTTGGTCTG	25	True	NA	0	True	AATAAA	-6	NA	161166481	161171208	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_161166673_161166839_161166935_161167099_161167235_161167338_161167487_161167994_161168128_161168412_161168577_161168992_161169184_161169659_161169721_161169905_161170025_161170408_161170520_161170619_161170770_161170906_161170950_161171033
H1_mix_00005991	chr1	+	2093	14	FSM	ENSG00000158864.13	ENST00000679176.1	2265	14	172	0	169	0	multi-exon	FALSE	canonical	2	2	junction_1	358.422959297363	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTAGGCCTAAACTTCTG	179	False	NA	9	True	AATAAA	-16	NA	161199483	161214381	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161199524_161202146_161202481_161203436_161203544_161206406_161206598_161209192_161209314_161209482_161209596_161209856_161209932_161210110_161210189_161210303_161210390_161210590_161210711_161212350_161212481_161213379_161213476_161213648_161213733_161213863
H1_mix_00005992	chr1	+	1873	15	FSM	ENSG00000158864.13	ENST00000367993.7	2042	15	169	0	169	0	multi-exon	FALSE	canonical	2	2	junction_1	346.103330388661	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGTATCTTAGTGTCT	179	False	NA	23	True	AATAAA	-30	NA	161199483	161214395	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161199524_161202146_161202481_161203436_161203544_161206406_161206598_161209192_161209314_161209482_161209596_161209856_161209932_161210110_161210189_161210303_161210390_161210590_161210711_161212350_161212481_161213379_161213476_161213648_161213733_161213863_161213922_161214155
H1_mix_00005993	chr1	+	2067	13	FSM	ENSG00000158864.13	ENST00000392179.5	2067	13	0	0	0	0	multi-exon	FALSE	canonical	3	1146	junction_1	71.7065780339108	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGTATCTTAGTGTCT	82	False	NA	23	True	AATAAA	-30	NA	161202146	161214395	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161202481_161203436_161203544_161206406_161206598_161209192_161209314_161209482_161209596_161209856_161209932_161210110_161210189_161210303_161210390_161210590_161210711_161212350_161212481_161213379_161213476_161213648_161213733_161213863
H1_mix_00005995	chr1	+	1957	13	FSM	ENSG00000158864.13	ENST00000678850.1	1940	13	-17	0	0	0	multi-exon	FALSE	canonical	3	1146	junction_1	69.8174206213766	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTAGGCCTAAACTTCTG	205	False	NA	9	True	AATAAA	-16	NA	161202269	161214381	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161202481_161203436_161203544_161206406_161206598_161209192_161209314_161209482_161209932_161210110_161210189_161210303_161210390_161210590_161210711_161212350_161212481_161213379_161213476_161213648_161213733_161213863_161213922_161214155
H1_mix_00006004	chr1	+	832	6	FSM	ENSG00000143252.16	ENST00000470743.4	832	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	454.663391972567	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGCCCACAGCTTGCC	9232	False	NA	NA	False	NA	NA	NA	161323613	161362657	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161323671_161326650_161326769_161328395_161328498_161340593_161340656_161356676_161356841_161362328
H1_mix_00006005	chr1	+	1944	1	FSM	ENSG00000288093.1	ENST00000667751.1	1871	1	-81	8	-81	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTGGTCCTTCTTCTTC	NA	False	NA	NA	False	AATAAA	-14	NA	161399916	161401860	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161399900_161401900
H1_mix_00006010	chr1	+	2066	10	FSM	ENSG00000117143.13	ENST00000367924.1	2066	10	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_7	58.9904784114341	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTCATTTGTACT	4058	False	NA	15	True	AATAAA	-15	NA	162566036	162599831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_162566349_162576776_162576982_162579427_162579604_162581286_162581460_162587474_162587669_162588692_162588834_162590322_162590512_162592734_162592783_162597791_162597859_162599270
H1_mix_00006014	chr1	+	831	7	FSM	ENSG00000143228.13	ENST00000450453.6	861	7	30	0	-15	0	multi-exon	FALSE	canonical	1	5	junction_1	113.738613593723	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGATTTAAATATGTTTT	NA	False	NA	NA	False	NA	NA	NA	163321919	163336848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_163322067_163322866_163323096_163326031_163326175_163327487_163327563_163328227_163328305_163328845_163328908_163336750
H1_mix_00006019	chr1	+	635	1	FSM	ENSG00000213070.3	ENST00000444896.1	598	1	-98	61	-98	-61	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGAGGAAGAGGAAGAGA	2	True	NA	NA	False	AAAAAG	-3	NA	164356668	164357303	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_164356700_164357300
H1_mix_00006020	chr1	+	2012	1	FSM	ENSG00000269887.1	ENST00000602747.1	715	1	-712	-585	-712	585	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGGAATGAACACTAGAAAG	NA	False	NA	NA	False	NA	NA	NA	164679372	164681384	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_164679400_164681400
H1_mix_00006021	chr1	+	733	6	FSM	ENSG00000143198.13	ENST00000495447.5	720	6	-13	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	669.873838868186	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCCTGACTCTTACCAC	-10	True	NA	27	True	AATAAA	-29	NA	165631225	165655617	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_165631294_165649754_165649965_165651013_165651088_165651977_165652036_165654278_165654352_165655367
H1_mix_00006022	chr1	+	694	7	FSM	ENSG00000143198.13	ENST00000367885.5	680	7	-14	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	778.838183878183	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTGACTCTTACCACTCA	-10	True	NA	30	True	AATAAA	-32	NA	165631225	165655620	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_165631294_165632230_165632275_165649840_165649965_165651013_165651088_165651977_165652036_165654278_165654352_165655367
H1_mix_00006023	chr1	+	1130	6	FSM	ENSG00000143198.13	ENST00000627653.1	1130	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	653.132329623944	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGATTGTTTCTGTTGCTT	1004	False	NA	NA	False	AATAAA	-20	NA	165632239	165656133	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_165632275_165649840_165649965_165651013_165651088_165651977_165652036_165654278_165654352_165655367
H1_mix_00006026	chr1	+	1331	1	FSM	ENSG00000272033.1	ENST00000607611.1	1893	1	-42	604	-42	-604	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGTCAACAAACGATAGAT	7124	False	NA	NA	False	NA	NA	NA	167379065	167380396	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_167379100_167380400
H1_mix_00006027	chr1	+	6007	1	ISM	ENSG00000143190.23	ENST00000367866.7	13843	16	200448	0	31657	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTTGGAGTTTCTTTGA	NA	False	NA	31	True	ATTAAA	-21	NA	167421333	167427340	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_167421300_167427300
H1_mix_00006030	chr1	+	2999	11	ISM	ENSG00000143164.16	ENST00000470721.5	2803	12	311	2813	-169	1276	5prime_fragment	FALSE	canonical	2	6	junction_10	40.1134640737995	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCTTGGAGAGTTTATA	105	False	NA	NA	False	AATAAA	-14	NA	167936983	168021237	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_167937009_167951799_167951862_167966628_167966722_167974829_167975016_167987494_167987609_167991203_167991340_167993225_167993441_168002481_168002576_168003869_168003990_168004532_168004794_168019544
H1_mix_00006031	chr1	+	3209	10	ISM	ENSG00000143164.16	ENST00000367843.7	3302	20	84735	56	5509	1	3prime_fragment	FALSE	canonical	3	26	junction_1	34.0787033892335	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCATGTTTGTTGCTTTC	NA	False	NA	12	True	AATAAA	-16	NA	168021395	168075787	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_168023048_168038370_168038489_168043024_168043141_168044584_168044672_168044899_168045228_168063620_168063760_168065589_168065747_168066376_168066466_168068357_168068464_168075370
H1_mix_00006037	chr1	+	14107	1	FSM	ENSG00000213062.5	ENST00000392097.5	14107	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGTCTGTTTTGTTAT	158	False	NA	NA	False	AATAAA	-16	NA	169486075	169500182	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_169486100_169500200
H1_mix_00006038	chr1	+	937	6	FSM	ENSG00000000460.17	ENST00000472795.5	925	6	-12	0	-12	0	multi-exon	FALSE	canonical	1	4	junction_1	87.7847367143059	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGAATTTGTAAAATTTA	NA	False	NA	NA	False	AATAAA	-16	NA	169794717	169804386	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_169794906_169798856_169798959_169800882_169800972_169802620_169802726_169803168_169803310_169804074
H1_mix_00006042	chr1	+	1955	12	FSM	ENSG00000117523.18	ENST00000476522.5	1931	12	-24	0	-3	0	multi-exon	FALSE	canonical	3	6	junction_4	12.7849343156133	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAGAACGGCAGAAAGAAAA	-26	True	NA	-31	True	AAAAAG	-9	NA	171485526	171532792	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_171485736_171512031_171512201_171512994_171513173_171514535_171514631_171515733_171515860_171517590_171517815_171522176_171522260_171523220_171523355_171523434_171523523_171524820_171524966_171527790_171527845_171532342
H1_mix_00006043	chr1	+	10389	35	NIC	ENSG00000117523.18	novel	10624	35	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_4	50.2939542481006	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGGAGCTTATAATCAT	43	False	NA	14	True	AATAAA	-19	NA	171485595	171593511	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_171485736_171512031_171512201_171512994_171513173_171514535_171514646_171515733_171515860_171517590_171517815_171522176_171522260_171523220_171523355_171523434_171523523_171524820_171524966_171527790_171527845_171532342_171532962_171535427_171535598_171536028_171536279_171537262_171537474_171539970_171542230_171545478_171545688_171550085_171550241_171557239_171558144_171561017_171561104_171566232_171566422_171566591_171566844_171568246_171568340_171571319_171571422_171574926_171575129_171577433_171577638_171579353_171579467_171579827_171579965_171583955_171584188_171584418_171584542_171587002_171587222_171587647_171587752_171588378_171588506_171591151_171591205_171591586
H1_mix_00006044	chr1	+	10368	35	NIC	ENSG00000117523.18	novel	10355	34	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	51.5549225060234	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGGAGCTTATAATCAT	43	False	NA	14	True	AATAAA	-19	NA	171485595	171593511	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_171485736_171512031_171512201_171513000_171513173_171514535_171514646_171515733_171515860_171517590_171517815_171522176_171522260_171523220_171523355_171523434_171523523_171524820_171524966_171527790_171527845_171532342_171532962_171535427_171535598_171536028_171536279_171537262_171537474_171539970_171542230_171545478_171545688_171550085_171550241_171557239_171558144_171561017_171561104_171566232_171566422_171566591_171566844_171568246_171568340_171571319_171571422_171574926_171575129_171577433_171577638_171579353_171579467_171579827_171579965_171583955_171584188_171584418_171584527_171587002_171587222_171587647_171587752_171588378_171588506_171591151_171591205_171591586
H1_mix_00006048	chr1	+	3830	15	FSM	ENSG00000117593.12	ENST00000649067.1	3820	15	-10	0	0	0	multi-exon	FALSE	canonical	3	15	junction_12	65.9484956737654	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATAAAAGTACTTTGAAA	-13	True	NA	-15	True	GATAAA	-2	NA	173824652	173858397	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_173825357_173826686_173826787_173828332_173828400_173830659_173830762_173831534_173831631_173833375_173833500_173834472_173834520_173836939_173837047_173838189_173838260_173839366_173839547_173840865_173840974_173845228_173845292_173853348_173853568_173853794_173853906_173856665
H1_mix_00006053	chr1	+	7546	1	ISM	ENSG00000185278.15	ENST00000367701.9	19128	4	27043	5	27043	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATTTGAATCTGTCTTT	NA	False	NA	24	True	ATTAAA	-12	NA	173895998	173903544	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_173896000_173903500
H1_mix_00006058	chr1	+	6826	15	FSM	ENSG00000057252.13	ENST00000540564.5	6861	15	35	0	35	0	multi-exon	FALSE	canonical	1	1	junction_2	55.8907918376981	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATGTCTTTTCTGATTC	4	True	NA	26	True	ATTAAA	-16	NA	179293748	179358677	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_179293937_179302676_179302803_179335505_179335658_179337836_179337897_179339437_179339546_179341027_179341311_179342113_179342193_179342861_179342944_179343589_179343636_179344946_179345077_179347599_179347698_179348843_179348943_179350295_179350432_179351316_179351463_179353584
H1_mix_00006059	chr1	+	593	9	FSM	ENSG00000143337.19	ENST00000527391.5	593	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	71.0570853258139	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTTATGTATTCAGTT	19	False	NA	NA	False	NA	NA	NA	179882888	179914054	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_179882993_179884691_179884770_179889312_179889370_179900125_179900168_179901301_179901389_179903965_179904023_179907822_179907865_179908604_179908674_179913997
H1_mix_00006063	chr1	+	2519	13	FSM	ENSG00000116260.17	ENST00000367600.5	2519	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_12	202.566175744016	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGGTGTGTTCTTTAAC	20	False	NA	30	True	AATAAA	-19	NA	180154896	180198034	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_180155173_180166490_180166592_180175320_180175367_180175930_180176034_180178793_180178885_180182173_180182320_180183915_180184051_180186052_180186183_180189551_180189675_180190432_180190581_180194212_180194393_180196261_180196600_180197332
H1_mix_00006065	chr1	+	2767	13	NNC	ENSG00000135838.14	novel	2543	13	NA	NA	-89	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	19.4957260273459	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCTTTTGTGAAGTCA	196	False	NA	NA	False	AATAAA	-19	NA	182789647	182830384	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_182789905_182792231_182792287_182794355_182794440_182803697_182803772_182806144_182806233_182812155_182812214_182814782_182814859_182816713_182816807_182818540_182818690_182818812_182818860_182822114_182822200_182825780_182825821_182828723
H1_mix_00006067	chr1	+	684	1	FSM	ENSG00000233562.1	ENST00000454879.1	684	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGGGTGACAAATAAAAAG	NA	False	NA	NA	False	GATAAA	-38	NA	183266601	183267285	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_183266600_183267300
H1_mix_00006068	chr1	+	5970	24	FSM	ENSG00000116698.22	ENST00000367537.7	5970	24	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	116.272478364197	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTATCGATTCTTTCT	4	True	NA	21	True	ATTAAA	-21	NA	183472477	183554193	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_183472650_183502252_183502392_183512836_183512869_183515873_183515992_183517687_183517821_183526595_183526768_183527955_183528028_183528891_183529043_183529397_183529534_183533163_183533327_183533675_183533833_183537144_183537216_183538379_183538441_183540983_183541104_183542075_183542365_183544352_183544498_183544929_183545313_183545965_183546338_183547102_183547253_183549207_183549289_183549763_183549924_183550750_183550922_183551044_183551191_183551817
H1_mix_00006071	chr1	+	5071	19	FSM	ENSG00000143344.16	ENST00000304685.8	5100	19	18	11	18	-11	multi-exon	FALSE	canonical	0	0	junction_2	6.08783445857899	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCCAAAGGGATTGTATCT	0	True	NA	-3	True	AATAAA	-33	NA	183636102	183928520	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_183636502_183742125_183742290_183806374_183806486_183847565_183847775_183865995_183866074_183880615_183880801_183883785_183883911_183884722_183884939_183888473_183888578_183892076_183892162_183897807_183897898_183900149_183900237_183902567_183902601_183904849_183904972_183907011_183907102_183912081_183912269_183916446_183916702_183922221_183922337_183926104
H1_mix_00006076	chr1	+	2230	1	FSM	ENSG00000273004.1	ENST00000609881.1	752	1	-1368	-110	-1368	110	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCGCCCCCGGACAATTA	NA	False	NA	NA	False	NA	NA	NA	185316410	185318640	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_185316400_185318600
H1_mix_00006077	chr1	+	2051	4	ISM	ENSG00000143341.12	ENST00000271588.9	18368	107	444024	-14	7028	14	3prime_fragment	FALSE	canonical	2	5	junction_1	8.05536398239638	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATTCGTTTCCTTGCAG	NA	False	NA	19	True	AATAAA	-37	NA	186178414	186190963	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_186178767_186182167_186182288_186187882_186188010_186189511
H1_mix_00006081	chr1	+	365	1	FSM	ENSG00000273129.2	ENST00000608917.2	2544	1	2317	-138	2317	138	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACTTAGAGAGTGGAGAT	2183	False	NA	NA	False	NA	NA	NA	186682938	186683303	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_186682900_186683300
H1_mix_00006082	chr1	+	2858	18	FSM	ENSG00000116711.10	ENST00000367466.4	2879	18	21	0	21	0	multi-exon	FALSE	canonical	2	4	junction_1	3.1104244862123	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGAGATAACTGAGTTTT	-9	True	NA	NA	False	AATAAA	-20	NA	186828969	186988981	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_186829036_186854285_186854388_186870434_186870517_186893010_186893160_186894097_186894212_186906964_186907003_186911247_186911390_186932762_186932900_186939007_186939231_186939979_186940095_186946636_186946775_186946868_186946962_186950656_186950729_186956101_186956345_186965408_186965594_186977592_186977789_186979314_186979473_186988376
H1_mix_00006085	chr1	+	1802	10	NIC	ENSG00000116747.13	novel	8291	9	NA	NA	46	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_9	31.6617929972778	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGTGTCTGTCTATCTC	8	False	NA	89	True	AATAAA	-15	NA	193059704	193091775	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_193059777_193069033_193069635_193075819_193076041_193076500_193076648_193076912_193077051_193081363_193081481_193082185_193082300_193082561_193082709_193084578_193084699_193091650
H1_mix_00006089	chr1	+	250	2	Intergenic	novelGene_132	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	60	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGCTGAAGACTGACG	NA	False	NA	NA	False	NA	NA	NA	198035051	198037243	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_198035205_198037146
H1_mix_00006090	chr1	+	1021	5	FSM	ENSG00000151414.15	ENST00000493790.1	1021	5	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	6.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGATGGTTTTGAATGG	9546	False	NA	NA	False	NA	NA	NA	198277703	198319749	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_198278070_198278953_198279062_198292944_198293040_198297126_198297241_198319411
H1_mix_00006091	chr1	+	4822	8	NNC	ENSG00000116833.14	novel	1793	4	NA	NA	-3748	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	8.2189427792243	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAAAGTTTTTATGTT	124	False	NA	12	True	AATAAA	-24	NA	200039076	200177415	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_200039132_200039657_200039796_200043773_200043893_200045442_200045585_200048171_200048819_200111201_200111322_200120807_200120956_200173962
H1_mix_00006093	chr1	+	3019	3	NIC	ENSG00000230623.7	novel	725	3	NA	NA	-31	1681	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	188	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATATTCTGACAGAAATATA	NA	False	NA	107	True	CATAAA	-16	NA	200411600	200480350	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_200411963_200473908_200474183_200477967
H1_mix_00006094	chr1	+	4182	2	FSM	ENSG00000230623.7	ENST00000660132.1	1213	2	-1263	-1706	-1263	412	multi-exon	FALSE	canonical	3	27	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGGCTTCAAGAGATTCT	NA	False	NA	NA	False	NA	NA	NA	200443223	200476368	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_200444946_200473908
H1_mix_00006095	chr1	+	4451	10	NIC	ENSG00000163362.11	novel	4298	10	NA	NA	-159	0	intron_retention	TRUE	canonical	3	48	junction_1	52.0130562906215	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGGGATGAGGGATTTT	NA	False	NA	-1	True	AATAAA	-23	NA	200890888	200915735	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_200891403_200898306_200898456_200899472_200899598_200900103_200900221_200900936_200901160_200907833_200907888_200908729_200908941_200909223_200909398_200911452_200912138_200913536
H1_mix_00006097	chr1	+	3810	2	FSM	ENSG00000229191.1	ENST00000446333.1	2497	2	-17	-1296	-17	294	multi-exon	FALSE	canonical	3	9	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGGTTTTGTATGAACC	4255	False	NA	NA	False	AATAAA	-3	NA	201023931	201029086	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_201024077_201025421
H1_mix_00006098	chr1	+	7524	32	NIC	ENSG00000134369.16	novel	13891	34	NA	NA	41	-2581	combination_of_known_splicesites	TRUE	canonical	1	2	junction_3	32.9356892350869	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTGTTTTCATTTTTT	11	False	NA	31	True	AATAAA	-24	NA	201539167	201820763	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_201539343_201622852_201623607_201629403_201629508_201648633_201649426_201712816_201712920_201718389_201718756_201780420_201780560_201781011_201781310_201782175_201782870_201783405_201783853_201785309_201785352_201786428_201786578_201788467_201788639_201789739_201789793_201790553_201790578_201790688_201790767_201793791_201793876_201794465_201794578_201803592_201803715_201807952_201808150_201808417_201808611_201808702_201808872_201809163_201809262_201809441_201809538_201809945_201810106_201810522_201810759_201811602_201811758_201811902_201811975_201812464_201812662_201813139_201813259_201817087_201817286_201819836
H1_mix_00006099	chr1	+	5150	25	NIC	ENSG00000134369.16	novel	11645	27	NA	NA	81	-2594	combination_of_known_junctions	FALSE	canonical	3	18	junction_7	22.3903190885902	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTGGTTTTTATTTT	17	False	NA	18	True	AATAAA	-11	NA	201739948	201820750	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_201740077_201780420_201780560_201781011_201781310_201782175_201782870_201783405_201783853_201785309_201785352_201786428_201786578_201789739_201789793_201790688_201790767_201793791_201793876_201794465_201794578_201803592_201803715_201807952_201808150_201808417_201808611_201808702_201808872_201809163_201809262_201809441_201809538_201809945_201810106_201810522_201810759_201811602_201811758_201811902_201811975_201812464_201812662_201813139_201813259_201817087_201817286_201819836
H1_mix_00006100	chr1	+	4047	24	NNC	ENSG00000198700.10	novel	11416	24	NA	NA	43	589	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	296.797901490092	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTTGCATGGTATAAGG	19	True	NA	15	True	AGTAAA	-19	NA	201829199	201876962	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_201829373_201847278_201847341_201847551_201847639_201848392_201848595_201852103_201852193_201853010_201853098_201854594_201854715_201854822_201854924_201855123_201855183_201855782_201855935_201857095_201857195_201858446_201858554_201858854_201858995_201863447_201863608_201866732_201866960_201868647_201868797_201869589_201869719_201870582_201870859_201871160_201871328_201872827_201872962_201874249_201874373_201874828_201874937_201875151_201875229_201875943
H1_mix_00006101	chr1	+	2093	10	FSM	ENSG00000176393.11	ENST00000471105.5	2093	10	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	208.169268732069	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGATTGAGTGACTATTAAA	272	False	NA	24	True	AATAAA	-24	NA	201982954	202006147	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_201983114_201988903_201989045_201996146_201996410_201997318_201997555_201999901_202000016_202001375_202001489_202001658_202001768_202003236_202003462_202004353_202004497_202005557
H1_mix_00006103	chr1	+	380	4	FSM	ENSG00000077157.22	ENST00000434615.2	380	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0.471404520791032	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGGTTACAGCTACTCC	NA	False	NA	NA	False	NA	NA	NA	202442525	202449097	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_202442573_202443086_202443128_202445045_202445229_202448988
H1_mix_00006104	chr1	+	802	2	FSM	ENSG00000228288.8	ENST00000690240.1	836	2	31	3	-4	0	multi-exon	FALSE	canonical	3	20	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATTTGTCTTTTTTCCGCG	24	False	NA	22	True	NA	NA	NA	202810906	202811912	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_202811371_202811574
H1_mix_00006106	chr1	+	924	4	FSM	ENSG00000163444.12	ENST00000543891.5	924	4	0	0	0	0	multi-exon	FALSE	canonical	3	1081	junction_2	175.670777940505	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGCCATTCCAGAAAGCA	19	False	NA	NA	False	NA	NA	NA	203007402	203016094	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_203007864_203008642_203008811_203014888_203015049_203015959
H1_mix_00006107	chr1	+	6117	25	NIC	ENSG00000143847.16	novel	6508	30	NA	NA	-1973	0	intron_retention	TRUE	canonical	1	3	junction_6	5.80813007774447	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATGGCCTCCAGTCTTT	NA	False	NA	37	True	AATAAA	-23	NA	203043435	203078735	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_203043499_203043930_203044096_203044378_203044454_203044695_203044786_203045367_203045560_203045840_203045988_203048226_203048311_203048582_203048715_203048917_203048981_203049675_203049768_203051768_203051878_203053752_203053962_203055431_203055673_203056119_203056156_203056374_203056509_203056783_203056951_203059177_203059272_203059769_203059852_203060216_203060418_203060969_203061033_203063827_203064004_203067694_203067793_203068452_203068629_203071691_203071761_203075576
H1_mix_00006109	chr1	+	2879	3	FSM	ENSG00000163485.17	ENST00000367235.1	2219	3	-4	-656	-4	0	multi-exon	FALSE	canonical	3	6	junction_2	6.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAGCACATTGCTGGGC	-12	True	NA	13	True	AATAAA	-16	NA	203128301	203167405	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_203128433_203128784_203129183_203165055
H1_mix_00006110	chr1	+	388	2	FSM	ENSG00000058668.15	ENST00000466407.1	388	2	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAGAGGAGTCAAATGAC	NA	False	NA	NA	False	NA	NA	NA	203723960	203727754	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_203723989_203727394
H1_mix_00006112	chr1	+	1063	3	FSM	ENSG00000058673.17	ENST00000466470.5	944	3	-31	-88	0	0	multi-exon	FALSE	canonical	3	144	junction_1	19	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTATTTTGTGGGCTGG	-5	True	NA	NA	False	NA	NA	NA	203795622	203802261	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_203795795_203796292_203796497_203801574
H1_mix_00006114	chr1	+	5098	20	FSM	ENSG00000058673.17	ENST00000332127.8	5015	20	-83	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	206.354802970857	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGTTGTGAGCTAAGTA	-5	True	NA	17	True	AATAAA	-18	NA	203795622	203854124	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_203795795_203796292_203796497_203801574_203801629_203802651_203803017_203816925_203817125_203818569_203818690_203828298_203828423_203829450_203829655_203829779_203829897_203830122_203830204_203831660_203831772_203833790_203833854_203837965_203838065_203840305_203840375_203847183_203847688_203848330_203848408_203849710_203850027_203850514_203850682_203851056_203851125_203852140
H1_mix_00006115	chr1	+	6213	19	NIC	ENSG00000058673.17	novel	5917	18	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_16	211.248471394864	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGTTGTGAGCTAAGTA	-5	True	NA	17	True	AATAAA	-18	NA	203795622	203854124	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_203795776_203796292_203796608_203801574_203803017_203816925_203817125_203818569_203818690_203828298_203828423_203829450_203829655_203829779_203829897_203830122_203830204_203831660_203831772_203833790_203833854_203837965_203838065_203840305_203840375_203847183_203847688_203848330_203848408_203849710_203850027_203850514_203850682_203851056_203851125_203852140
H1_mix_00006117	chr1	+	4731	20	NNC	ENSG00000058673.17	novel	5015	20	NA	NA	5	3	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_17	182.866525654605	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGATGTTGTGAGCTAA	48	False	NA	14	True	AATAAA	-15	NA	203795675	203854121	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_203795795_203796292_203796497_203801574_203801629_203802956_203803017_203816925_203817125_203818569_203818690_203828298_203828423_203829450_203829655_203829779_203829897_203830122_203830204_203831660_203831772_203833790_203833854_203837965_203838065_203840305_203840375_203847183_203847688_203848330_203848408_203849710_203850021_203850514_203850682_203851056_203851125_203852140
H1_mix_00006118	chr1	+	5845	18	NIC	ENSG00000058673.17	novel	5917	18	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_15	185.193530120833	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGTTGTGAGCTAAGTA	48	False	NA	17	True	AATAAA	-18	NA	203795675	203854124	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_203795776_203801574_203803017_203816925_203817125_203818569_203818690_203828298_203828423_203829450_203829655_203829779_203829897_203830122_203830204_203831660_203831772_203833790_203833854_203837965_203838065_203840305_203840375_203847183_203847688_203848330_203848408_203849710_203850027_203850514_203850682_203851056_203851125_203852140
H1_mix_00006119	chr1	+	6011	19	NIC	ENSG00000058673.17	novel	5015	20	NA	NA	8	0	intron_retention	FALSE	canonical	0	0	junction_16	192.92809541381	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGTTGTGAGCTAAGTA	86	False	NA	17	True	AATAAA	-18	NA	203795713	203854124	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_203795776_203796292_203796497_203801574_203803017_203816925_203817125_203818569_203818690_203828298_203828423_203829450_203829655_203829779_203829897_203830122_203830204_203831660_203831772_203833790_203833854_203837965_203838065_203840305_203840375_203847183_203847688_203848330_203848408_203849710_203850027_203850514_203850682_203851056_203851125_203852140
H1_mix_00006122	chr1	+	821	3	FSM	ENSG00000143842.15	ENST00000534185.1	723	3	-98	0	-60	0	multi-exon	FALSE	canonical	3	16	junction_1	166	147	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAGGAACTCTATGGAAG	NA	False	NA	NA	False	NA	NA	NA	204073054	204114570	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_204073712_204114320_204114433_204114518
H1_mix_00006124	chr1	+	9795	26	NIC	ENSG00000163531.17	novel	10336	30	NA	NA	5	-14	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	14.7037954283919	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTCAAAATGGACTCTTG	-18	True	NA	-4	True	AATAAA	-3	NA	204828656	205022808	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_204828783_204920631_204920741_204944225_204944407_204950556_204950575_204952010_204952117_204954187_204954385_204954828_204954952_204957655_204957827_204968248_204968361_204968797_204968983_204970615_204970748_204973275_204973420_204974178_204974291_204974656_204974824_204975270_204975419_204976670_204976796_204977680_204977726_204978967_204979070_204979361_204979560_204980369_204980441_204981797_204982021_204987417_204987541_204988632_204988807_205009556_205009689_205012796_205012867_205016307
H1_mix_00006125	chr1	+	502	5	FSM	ENSG00000163531.17	ENST00000505079.5	573	5	71	0	71	0	multi-exon	FALSE	canonical	3	10	junction_1	17.058722109232	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATCCGCCTGCAGGTGT	NA	False	NA	NA	False	NA	NA	NA	204929479	204954361	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_204929503_204944225_204944407_204950556_204950575_204952010_204952117_204954187
H1_mix_00006126	chr1	+	765	4	FSM	ENSG00000163531.17	ENST00000471392.1	769	4	0	4	0	-4	multi-exon	FALSE	canonical	1	1	junction_3	11.0855260988773	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATATGTGTGTGTGTGTG	NA	False	NA	NA	False	AATATA	-20	NA	204979387	204984325	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_204979560_204980369_204980441_204981797_204982021_204984026
H1_mix_00006128	chr1	+	1726	12	FSM	ENSG00000184144.12	ENST00000525433.2	4065	12	0	2339	0	-512	multi-exon	FALSE	canonical	2	3	junction_8	3.35256162083378	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGGAAGCAATCAGCTAG	3821	False	NA	NA	False	NA	NA	NA	205062447	205072595	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_205062570_205064321_205064473_205064622_205064751_205065086_205065263_205065788_205065910_205066440_205066600_205067100_205067251_205069490_205069562_205069826_205070062_205070425_205070539_205071946_205072134_205072482
H1_mix_00006129	chr1	+	2358	1	FSM	ENSG00000271580.1	ENST00000603227.1	784	1	-1130	-444	-1130	444	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCGCCTCAGCCTCCCCA	NA	False	NA	NA	False	NA	NA	NA	205090032	205092390	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_205090000_205092400
H1_mix_00006130	chr1	+	484	1	FSM	ENSG00000235363.1	ENST00000432323.1	225	1	-108	-151	-108	151	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGAGGCTTTCTTGGCTGG	NA	False	NA	NA	False	AATAAA	-35	NA	205351138	205351622	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_205351100_205351600
H1_mix_00006131	chr1	+	2896	3	FSM	ENSG00000224717.1	ENST00000442318.1	2885	3	-11	0	-11	0	multi-exon	FALSE	canonical	1	2	junction_1	1.5	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGTAGCTTAGTGAAGC	NA	False	NA	NA	False	NA	NA	NA	205455917	205469024	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_205456224_205456891_205457078_205466620
H1_mix_00006132	chr1	+	3153	16	FSM	ENSG00000117266.16	ENST00000506784.5	2143	16	-11	-999	-9	0	multi-exon	FALSE	canonical	3	20	junction_3	29.4904881086917	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGGAGCGAGCAGTCTC	28	False	NA	17	True	AATATA	-15	NA	205504586	205532785	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_205504797_205523146_205523298_205523482_205523716_205524231_205524358_205525138_205525196_205526064_205526180_205526366_205526462_205526774_205526838_205527793_205527918_205528047_205528169_205528998_205529097_205529323_205529430_205529520_205529564_205530258_205530350_205530627_205530706_205531343
H1_mix_00006133	chr1	+	3105	16	NIC	ENSG00000117266.16	novel	3141	16	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_3	33.8425110704799	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCGAGCAGTCTCGTACA	29	True	NA	22	True	AATATA	-20	NA	205504721	205532790	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_205504879_205523146_205523298_205523482_205523716_205524231_205524358_205525138_205525196_205526064_205526180_205526366_205526462_205526774_205526838_205527793_205527918_205528047_205528169_205528998_205529097_205529323_205529430_205529520_205529564_205530258_205530350_205530627_205530706_205531343
H1_mix_00006136	chr1	+	1692	1	FSM	ENSG00000206762.1	ENST00000384035.1	107	1	-176	-1409	-176	1409	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2818	False	NA	NA	False	NA	NA	NA	205594864	205596556	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_205594900_205596600
H1_mix_00006137	chr1	+	6881	23	NIC	ENSG00000266028.8	novel	6884	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	100	junction_7	68.1506747054636	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCAGTTCATATCCCTT	0	True	NA	8	True	AATAAA	-20	NA	206203540	206464436	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_206203651_206205428_206206038_206303280_206303474_206342845_206343009_206384013_206384077_206392688_206392905_206393544_206393674_206401423_206401646_206405248_206405351_206406376_206406575_206415888_206415974_206419372_206419401_206421249_206421275_206430161_206430223_206436964_206437043_206437963_206438099_206439975_206440082_206446074_206446300_206450385_206450466_206453199_206453381_206454877_206455025_206458622_206458948_206461036
H1_mix_00006140	chr1	+	1361	8	FSM	ENSG00000263528.8	ENST00000605818.5	1595	8	0	234	0	-234	multi-exon	FALSE	canonical	3	24	junction_1	5.48839220351387	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCAGGATATTCTCTTAG	-10	True	NA	NA	False	NA	NA	NA	206470475	206478063	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_206470699_206471155_206471246_206473195_206473315_206474330_206474472_206474864_206474995_206476180_206476363_206476677_206476839_206477748
H1_mix_00006142	chr1	+	3618	6	FSM	ENSG00000266094.8	ENST00000579436.7	3799	6	8	173	-7	1	multi-exon	FALSE	canonical	2	4	junction_1	3.18747549010185	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATGTTAGAAACGTCTCC	9	False	NA	27	True	AATAAA	-19	NA	206507538	206589275	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_206508060_206538171_206538294_206583268_206583380_206584386_206584685_206585179_206585296_206586825
H1_mix_00006144	chr1	+	7073	15	FSM	ENSG00000123836.15	ENST00000367080.8	7073	15	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_14	13.5075564641668	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAAGGCTTCTGGGTTTT	9	True	NA	20	True	AATAAA	-23	NA	207053274	207077817	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_207053367_207054700_207054803_207061952_207062079_207062619_207062717_207063142_207063210_207063346_207063422_207063772_207063830_207065035_207065161_207067498_207067707_207068162_207068310_207069423_207069529_207070279_207070410_207071187_207071251_207071508_207071574_207072203
H1_mix_00006146	chr1	+	3291	12	FSM	ENSG00000117335.20	ENST00000367041.5	3281	12	-12	2	-9	-2	multi-exon	FALSE	canonical	3	45	junction_11	278.243219605076	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATGATGTGTTTATTTC	NA	False	NA	21	True	AATAAA	-22	NA	207752044	207795511	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207790252_207790346_207793518
H1_mix_00006147	chr1	+	1585	1	FSM	ENSG00000234219.1	ENST00000435216.1	680	1	-798	-107	-798	107	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTCTGCAGCCCCAGACC	9396	False	NA	NA	False	NA	NA	NA	207761785	207763370	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_207761800_207763400
H1_mix_00006151	chr1	+	4600	4	NIC	ENSG00000117335.20	novel	3320	13	NA	NA	12311	0	intron_retention	FALSE	canonical	3	45	junction_3	366.767258928905	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTCATGATGATGTGT	2716	False	NA	14	True	AATAAA	-15	NA	207782649	207795504	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_207785107_207785618_207785683_207790252_207790346_207793518
H1_mix_00006153	chr1	+	1150	5	FSM	ENSG00000230937.13	ENST00000660261.1	1144	5	-6	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	18.3915741577495	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	-4	True	NA	21	True	ACTAAA	-21	NA	209428816	209432549	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_209429409_209429567_209429621_209430424_209430501_209431742_209431826_209432203
H1_mix_00006156	chr1	+	509	5	FSM	ENSG00000008118.10	ENST00000494990.1	573	5	64	0	64	0	multi-exon	FALSE	canonical	2	3	junction_1	1.6583123951777	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCACCTGTCCTGGACCA	91	False	NA	NA	False	NA	NA	NA	209607857	209611944	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_209607934_209608979_209609093_209609850_209609930_209611464_209611553_209611791
H1_mix_00006157	chr1	+	3338	5	ISM	ENSG00000143469.20	ENST00000367015.5	5094	8	68328	1340	6	-16	3prime_fragment	FALSE	canonical	3	10	junction_1	3.26917420765551	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGTTAGAACCTGAATCAA	NA	False	NA	-4	True	AATAAA	-7	NA	210021051	210162951	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_210021255_210094321_210094594_210100011_210100462_210155720_210155911_210160728
H1_mix_00006158	chr1	+	5005	1	Genic_Genomic	ENSG00000143469.20	novel	NA	NA	NA	NA	145360	21	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTTTTTTTTTTTCCTTT	NA	False	NA	NA	False	TTTAAA	-28	NA	210166405	210171410	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_+_210166400_210171400
H1_mix_00006159	chr1	+	3168	10	FSM	ENSG00000054392.13	ENST00000541565.5	3164	10	-4	0	-4	0	multi-exon	FALSE	canonical	0	0	junction_4	7.56861616263396	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGAGGCTGATTAATTA	-8	True	NA	21	True	AATAAA	-22	NA	210328247	210676296	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_210328385_210348932_210349067_210362851_210362920_210387467_210387582_210418153_210418326_210464504_210464656_210513152_210513189_210587897_210588100_210623525_210623671_210674287
H1_mix_00006160	chr1	+	2525	11	FSM	ENSG00000117625.14	ENST00000367006.8	2525	11	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_10	50.5213816121452	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGAGTTGGTTTTTTTTGTT	3	True	NA	13	True	AATATA	-23	NA	211259278	211314591	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_211259727_211260107_211260165_211271231_211271310_211274209_211274263_211276256_211276419_211278116_211278242_211279237_211279317_211289177_211289397_211295675_211295754_211304082_211304141_211313423
H1_mix_00006161	chr1	+	686	3	FSM	ENSG00000117625.14	ENST00000472734.1	452	3	-234	0	6	0	multi-exon	FALSE	canonical	3	19	junction_2	48	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTTGGAGAGAAACAAT	-13	True	NA	17	True	ATTAAA	-14	NA	211259371	211261202	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_211259727_211260107_211260165_211260928
H1_mix_00006162	chr1	+	730	3	NNC	ENSG00000117625.14	novel	452	3	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	55	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTTGGAGAGAAACAAT	6	True	NA	17	True	ATTAAA	-14	NA	211259390	211261202	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_211259727_211260107_211260165_211260865
H1_mix_00006164	chr1	+	5501	3	FSM	ENSG00000117625.14	ENST00000528066.1	569	3	-3370	-1562	-820	0	multi-exon	FALSE	canonical	3	51	junction_2	13.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGGAGTTGGTTTTTTT	NA	False	NA	9	True	AATATA	-19	NA	211300640	211314587	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_211304141_211312354_211312488_211312719
H1_mix_00006168	chr1	+	1630	5	FSM	ENSG00000153363.14	ENST00000664255.1	1671	5	41	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	26.3912864407933	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTACTCTGTCCCTT	-38	True	NA	NA	False	TTTAAA	-6	NA	211382776	211399219	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_211382926_211391615_211391698_211391826_211391977_211396766_211396832_211398035
H1_mix_00006169	chr1	+	469	3	FSM	ENSG00000153363.14	ENST00000610948.1	469	3	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_1	39.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTGTTTTTGAAGGCC	7328	False	NA	8	True	AATAAA	-14	NA	211399257	211432534	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_211399438_211426210_211426284_211432318
H1_mix_00006170	chr1	+	3662	13	FSM	ENSG00000143476.18	ENST00000475419.5	3662	13	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_7	154.895932806514	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGATTGATAAA	24	False	NA	NA	False	NA	NA	NA	212035845	212104594	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_212035943_212044659_212044759_212047150_212047213_212047296_212047418_212062883_212062950_212064916_212065030_212066811_212066886_212068598_212068704_212072100_212072214_212078172_212078263_212080614_212080751_212100251_212101085_212102841
H1_mix_00006180	chr1	+	3258	2	NIC	ENSG00000282718.1	novel	554	3	NA	NA	183	2809	intron_retention	FALSE	canonical	3	28	junction_1	0	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCATGCTTTCTCATGTT	6491	False	NA	23	True	AATAAA	-17	NA	212916969	212920386	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_212917201_212917359
H1_mix_00006181	chr1	+	4224	9	FSM	ENSG00000143494.16	ENST00000366968.8	4224	9	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_2	213.898303815154	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTGTTTTTCTTCTAAAT	0	True	NA	23	True	AATAAA	-19	NA	212950593	212991585	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_212950741_212951338_212951393_212951588_212951819_212961165_212961255_212965721_212965779_212966270_212966346_212972579_212972962_212973954_212974071_212988511
H1_mix_00006182	chr1	+	819	6	NNC	ENSG00000143494.16	novel	4224	9	NA	NA	-8	-1747	at_least_one_novel_splicesite	FALSE	canonical	3	156	junction_5	392.378184918581	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTTGTTCATCCCTTTA	16	True	NA	11	True	AATAAA	-21	NA	212950609	212971171	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_212950741_212951338_212951393_212951588_212951819_212961165_212961361_212966270_212966346_212971037
H1_mix_00006183	chr1	+	4097	14	NIC	ENSG00000136643.12	novel	4188	15	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_7	26.5231840083507	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTCTTCTTCATTTAAT	-42	True	NA	18	True	AATAAA	-15	NA	213051245	213273464	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_213051510_213071005_213071042_213077695_213077817_213104453_213104570_213117316_213117411_213129526_213129890_213167857_213167974_213230496_213230545_213232122_213232256_213240701_213242298_213242568_213242659_213261557_213261641_213262720_213262817_213272523
H1_mix_00006185	chr1	+	1038	8	ISM	ENSG00000143499.14	ENST00000460580.5	1618	11	-132	6061	-12	0	5prime_fragment	FALSE	canonical	2	2	junction_1	16.5775850632899	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCCTTTACAACTGCCCT	-6	True	NA	NA	False	TATAAA	-2	NA	214281089	214331070	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_214281428_214314761_214314873_214318078_214318140_214318858_214318984_214324640_214324709_214327621_214327725_214330167_214330279_214330949
H1_mix_00006186	chr1	+	1618	11	FSM	ENSG00000143499.14	ENST00000460580.5	1618	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	15.1687178100194	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGGTTTGTATTTTCTT	30	True	NA	21	True	ATTAAA	-13	NA	214281221	214337131	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_214281428_214314761_214314873_214318078_214318140_214318858_214318984_214324640_214324709_214327621_214327725_214330167_214330279_214330949_214331071_214332017_214332193_214334199_214334309_214336703
H1_mix_00006189	chr1	+	1752	4	FSM	ENSG00000143353.12	ENST00000460522.5	1703	4	-2	-47	-2	47	multi-exon	FALSE	canonical	3	23	junction_2	117.318180839781	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAATGGCTGGGTTATATT	-10	True	NA	67	True	NA	NA	NA	219173866	219212912	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_219173982_219179146_219179247_219210531_219210648_219211491
H1_mix_00006190	chr1	+	2169	5	FSM	ENSG00000143353.12	ENST00000483635.5	2169	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	92.5270230797468	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGCATCGACCTATGT	19	False	NA	20	True	AATAAA	-25	NA	219173895	219212865	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_219174305_219179146_219179247_219193081_219193252_219210531_219210648_219211491
H1_mix_00006192	chr1	+	5198	17	FSM	ENSG00000116141.17	ENST00000402574.5	5273	17	0	75	0	8	multi-exon	FALSE	canonical	3	17	junction_16	23.5138755578488	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACCAGGATTTCCTTGGC	9	True	NA	-72	True	AATAAA	-27	NA	220528182	220664381	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_220528874_220579353_220579558_220581064_220581119_220598330_220598380_220599797_220599864_220604066_220604138_220615938_220615996_220618309_220618547_220618635_220618756_220631034_220631135_220632200_220632314_220635375_220635530_220635832_220636027_220650619_220650721_220651985_220652151_220653100_220653353_220661811
H1_mix_00006195	chr1	+	643	3	FSM	ENSG00000117791.16	ENST00000472447.1	699	3	56	0	56	0	multi-exon	FALSE	canonical	3	16	junction_1	5.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTTTTACTTCCTGACT	9529	False	NA	-48	True	NA	NA	NA	220780017	220784184	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_220780240_220781777_220781933_220783918
H1_mix_00006196	chr1	+	2071	7	NNC	ENSG00000186205.13	novel	7287	7	NA	NA	-54	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	54.5791983166562	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGTTTCAGATCTTACTAA	-41	True	NA	22	True	AATAAA	-16	NA	220786858	220814388	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_220787222_220791491_220791665_220796642_220796806_220797873_220798015_220805051_220805114_220805202_220805275_220813291
H1_mix_00006197	chr1	+	6383	1	FSM	ENSG00000221571.3	ENST00000609276.2	444	1	-5960	21	-5960	-21	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTGTGTCTCACATT	NA	False	NA	NA	False	AATAAA	-2	NA	220819659	220826042	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_220819700_220826000
H1_mix_00006199	chr1	+	3045	13	FSM	ENSG00000154305.18	ENST00000354906.7	3045	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	60.8885023811739	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAATTGGAAGATGACC	870	False	NA	NA	False	NA	NA	NA	222628473	222654661	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_222630390_222632164_222632327_222633103_222633250_222645553_222645686_222648828_222648851_222650291_222650381_222650633_222650712_222650792_222650904_222653007_222653131_222653227_222653340_222654242_222654299_222654388_222654480_222654654
H1_mix_00006200	chr1	+	6302	8	ISM	ENSG00000154305.18	ENST00000340535.11	2735	23	11661	602	-2678	0	intron_retention	FALSE	canonical	3	183	junction_4	23.3413008748573	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGACAGACTATATTAAC	724	False	NA	NA	False	NA	NA	NA	222655963	222665221	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_222658824_222659452_222659514_222659621_222659658_222659733_222659802_222659905_222660007_222660176_222660315_222662055_222662125_222662252
H1_mix_00006203	chr1	+	4115	13	FSM	ENSG00000162819.12	ENST00000340934.10	4104	13	-11	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	6.99354861441759	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTGAGATCTTTTGTT	-6	True	NA	17	True	AATAAA	-18	NA	222712552	222735187	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_222712943_222715683_222715801_222718924_222719032_222719262_222719360_222722418_222722515_222724091_222724165_222725449_222725556_222727167_222727258_222728742_222728829_222729619_222729702_222730026_222730178_222731356_222731517_222732627
H1_mix_00006204	chr1	+	4021	12	FSM	ENSG00000162819.12	ENST00000612948.4	4028	12	0	7	0	2	multi-exon	FALSE	canonical	1	1	junction_4	10.4888764377134	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGAGATCTTTTGTTTT	-6	True	NA	19	True	AATAAA	-20	NA	222712552	222735189	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_222712943_222715683_222715801_222718924_222719032_222719262_222719360_222724091_222724165_222725449_222725556_222727167_222727258_222728742_222728829_222729619_222729702_222730026_222730178_222731356_222731517_222732627
H1_mix_00006208	chr1	+	640	4	NIC	ENSG00000154309.9	novel	764	5	NA	NA	-2	0	intron_retention	FALSE	canonical	3	25	junction_1	28.0832096931007	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAAGCCCTTGTTTTTTTTG	-15	True	NA	13	True	AATAAA	-13	NA	222815075	222837380	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_222815172_222823883_222823946_222835118_222835216_222836995
H1_mix_00006211	chr1	+	428	5	NIC	ENSG00000154309.9	novel	517	5	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_4	27.9910700045568	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTGTTTTTTTTGGTAT	12	False	NA	17	True	AATAAA	-17	NA	222815139	222837384	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_222815172_222823883_222823946_222835118_222835216_222836995_222837067_222837218
H1_mix_00006214	chr1	+	240	2	FSM	ENSG00000162909.18	ENST00000483579.1	496	2	0	256	0	-256	multi-exon	FALSE	canonical	3	149	junction_1	0	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCCAGTTTACACTCGGG	2941	False	NA	NA	False	NA	NA	NA	223747107	223749220	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_223747166_223749038
H1_mix_00006215	chr1	+	1967	4	NNC	ENSG00000185495.10	novel	758	4	NA	NA	-40	-6	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	9.0921211313239	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAAGCCTGTTGGTGGAC	NA	False	NA	7	True	AATAAA	-16	NA	223992702	224010606	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_223993048_223995894_223996095_224003519_224003655_224009319
H1_mix_00006216	chr1	+	343	3	FSM	ENSG00000185495.10	ENST00000327086.8	343	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	6	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGTAACCTGATACTTCT	NA	False	NA	NA	False	NA	NA	NA	223995894	224003654	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_223996002_224002521_224002623_224003519
H1_mix_00006218	chr1	+	2820	1	FSM	ENSG00000185495.10	ENST00000540997.2	1886	1	-940	6	-940	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAAGCCTGTTGGTGGAC	NA	False	NA	7	True	AATAAA	-16	NA	224007786	224010606	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_224007800_224010600
H1_mix_00006219	chr1	+	1542	4	FSM	ENSG00000143771.12	ENST00000468318.5	1525	4	-17	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	1806.96731815738	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTAGTTTGTGGTTTAAT	-23	True	NA	11	True	AATAAA	-19	NA	224356870	224376884	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_224357069_224365878_224365992_224371282_224371424_224375794
H1_mix_00006222	chr1	+	1062	7	NNC	ENSG00000185842.16	novel	1103	7	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	89.7217922246318	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGTCAGAAACTTTATT	21	True	NA	9	True	AATAAA	-24	NA	224929698	224967924	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_224929836_224952673_224952780_224954958_224955099_224960152_224960303_224964478_224964610_224967430_224967584_224967679
H1_mix_00006229	chr1	+	551	2	FSM	ENSG00000163041.13	ENST00000653960.1	582	2	-12	43	0	-43	multi-exon	FALSE	canonical	3	5189	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAAAAATAGTTAAGTGT	-2	True	NA	NA	False	NA	NA	NA	226062713	226064781	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_226062812_226064328
H1_mix_00006230	chr1	+	1162	4	FSM	ENSG00000163041.13	ENST00000661429.1	895	4	0	-267	0	0	multi-exon	FALSE	canonical	3	5	junction_1	2854.03355893997	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAGCCTTGCCCTACAAT	5	True	NA	NA	False	ATTAAA	-33	NA	226063493	226072019	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_226063682_226064328_226064480_226065655_226065810_226071350
H1_mix_00006231	chr1	+	2887	12	NIC	ENSG00000143801.18	novel	2566	14	NA	NA	3	0	intron_retention	FALSE	canonical	3	44	junction_9	29.335055045891	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGTTAGAATCTTGGAG	NA	False	NA	4	True	AATAAA	-8	NA	226870574	226896086	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_226871405_226875364_226875551_226881887_226882049_226883704_226883920_226885537_226885680_226888090_226888159_226888828_226889050_226890034_226890134_226891277_226891362_226891745_226891845_226894006_226894126_226895423
H1_mix_00006233	chr1	+	3415	2	ISM	ENSG00000181450.18	ENST00000465266.1	533	5	-151	68750	-143	-68750	5prime_fragment	FALSE	canonical	3	56	junction_1	0	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTCTACTAAAAATTCAAAAA	NA	False	NA	NA	False	NA	NA	NA	227563399	227585603	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_227563725_227582513
H1_mix_00006235	chr1	+	2102	4	FSM	ENSG00000143740.15	ENST00000366760.5	1446	4	-51	-605	7	5	multi-exon	FALSE	canonical	3	13	junction_1	122.224747448661	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGAGCTCTGATTTTTTTT	-19	True	NA	NA	False	NA	NA	NA	227728605	227781831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_227728787_227758994_227759486_227766958_227767084_227780526
H1_mix_00006236	chr1	+	2768	6	FSM	ENSG00000143740.15	ENST00000680854.1	2768	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	127.875564514883	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGCCCAGGGAGCTCT	10	True	NA	NA	False	NA	NA	NA	227728634	227781821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_227728787_227731584_227731748_227747691_227748234_227758994_227759486_227766958_227767084_227780526
H1_mix_00006238	chr1	+	867	8	FSM	ENSG00000143774.17	ENST00000366730.5	937	8	70	0	70	0	multi-exon	FALSE	canonical	3	13	junction_1	466.048871922686	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGGGTGACCCCCGAC	NA	False	NA	NA	False	NA	NA	NA	228140031	228148840	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_228140160_228145510_228145625_228146025_228146068_228146841_228146939_228147405_228147545_228147614_228147700_228148370_228148457_228148664
H1_mix_00006252	chr1	+	657	2	FSM	ENSG00000143774.17	ENST00000471270.5	657	2	0	0	0	0	multi-exon	FALSE	canonical	3	1295	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGGAATGTGGCCCCAA	2010	False	NA	NA	False	AATAAA	-29	NA	228148090	228148955	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_228148457_228148664
H1_mix_00006254	chr1	+	2223	3	NNC	ENSG00000181873.13	novel	7828	3	NA	NA	12	16853	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	12.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTCTGCCTTGTTGTTTT	11	False	NA	26	True	AAGAAA	-16	NA	228165815	228199110	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_228166158_228174691_228175030_228197567
H1_mix_00006255	chr1	+	5082	7	ISM	ENSG00000154358.23	ENST00000570156.7	27013	116	11266	125500	3621	6734	internal_fragment	FALSE	canonical	1	1	junction_1	7.40870359029762	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGCTAATTCCTAGTAAA	6108	False	NA	15	True	AATAAA	-19	NA	228219309	228253376	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_228219600_228224458_228224735_228243182_228243459_228244295_228244572_228245412_228245689_228246527_228246804_228249964
H1_mix_00006257	chr1	+	712	3	FSM	ENSG00000154358.23	ENST00000668943.1	712	3	-2	2	-2	-2	multi-exon	FALSE	canonical	2	5	junction_1	2	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGTGTCCGGTGTCCAATT	NA	False	NA	NA	False	NA	NA	NA	228286877	228288343	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_228287040_228287693_228287961_228288060
H1_mix_00006258	chr1	+	9181	40	NNC	ENSG00000154358.23	novel	27013	116	NA	NA	66	0	intron_retention	TRUE	canonical	1	1	junction_6	9.72298766593241	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTCTCTCAGCAAGAATA	NA	False	NA	-33	True	NA	NA	NA	228303674	228361213	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_228303939_228304302_228304567_228305122_228305387_228306371_228306639_228306900_228307168_228307258_228307532_228309098_228309296_228309483_228309560_228315846_228316120_228316708_228316985_228317463_228317752_228317894_228318174_228318883_228319255_228321343_228322215_228323327_228323607_228332859_228332939_228333198_228333324_228333582_228333781_228334511_228334545_228334814_228334914_228335079_228335299_228335790_228335852_228336199_228336271_228337003_228337127_228337243_228337384_228337943_228338145_228338289_228338373_228338852_228339027_228339941_228340102_228340505_228340623_228340723_228340889_228341094_228341254_228341436_228341615_228342118_228342233_228349889_228350058_228350840_228350944_228351320_228351451_228352950_228353063_228356150_228356194_228359596
H1_mix_00006260	chr1	+	407	1	FSM	ENSG00000234975.6	ENST00000466086.2	412	1	-103	108	-103	-108	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGGTGAGCACGTGACCA	NA	False	NA	NA	False	NA	NA	NA	228687311	228687718	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_228687300_228687700
H1_mix_00006261	chr1	+	320	2	Intergenic	novelGene_168	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	55	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGATGGCCTGAACTGAA	NA	False	NA	NA	False	NA	NA	NA	228947751	228951558	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_228948004_228951490
H1_mix_00006262	chr1	+	965	2	Antisense	novelGene_ENSG00000236975.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTCCCCCATTTTACTT	NA	False	NA	NA	False	TATAAA	-9	NA	229174594	229177501	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr1_+_229174927_229176868
H1_mix_00006267	chr1	+	850	6	FSM	ENSG00000116906.13	ENST00000436239.5	839	6	-11	0	-11	0	multi-exon	FALSE	canonical	3	33	junction_1	162.810810451886	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGATAAGATCTTGGAAGAA	-17	True	NA	NA	False	TTTAAA	-44	NA	231241195	231266091	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_231241457_231260506_231260684_231262722_231262853_231265292_231265421_231265711_231265788_231266013
H1_mix_00006269	chr1	+	3552	2	Intergenic	novelGene_175	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	NA	False	NA	12	True	AATAAA	-18	NA	232118439	232123905	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_232118714_232120627
H1_mix_00006270	chr1	+	3349	4	NNC	ENSG00000235152.1	novel	818	3	NA	NA	80	2552	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	14.9888847706114	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACAGCCTCGGGTGTGAT	NA	False	NA	NA	False	AATAAA	-1	NA	232160170	232188195	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_232160224_232177207_232177267_232183937_232184078_232185098
H1_mix_00006271	chr1	+	280	1	FSM	ENSG00000242794.2	ENST00000464573.2	280	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAATAAACAAATAA	NA	False	NA	NA	False	NA	NA	NA	232222865	232223145	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_232222900_232223100
H1_mix_00006272	chr1	+	2966	1	FSM	ENSG00000212916.6	ENST00000418460.4	4514	1	12	1536	12	-1536	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTTTCTAAATTGTCT	-7	True	NA	NA	False	AATAAA	-3	NA	232805427	232808393	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_232805400_232808400
H1_mix_00006273	chr1	+	1000	2	FSM	ENSG00000168275.16	ENST00000366612.1	1013	2	13	0	13	0	multi-exon	TRUE	canonical	3	532	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTTTGTTTTGTTTTTG	37	False	NA	5	True	AGTAAA	-18	NA	234373713	234384046	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_234374390_234383722
H1_mix_00006274	chr1	+	868	4	FSM	ENSG00000152904.11	ENST00000497327.1	868	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	213.215071387242	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAATATCTTGCGCCAGAG	23	False	NA	NA	False	NA	NA	NA	235329028	235342559	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_235329184_235335241_235335335_235341707_235341779_235342010
H1_mix_00006275	chr1	+	1935	16	FSM	ENSG00000284770.2	ENST00000651186.1	1935	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	69.1832992050024	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGATTTTCTGATCTTATT	NA	False	NA	22	True	AATAAA	-16	NA	235367359	235448966	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_235367505_235380018_235380150_235414432_235414619_235419416_235419562_235427139_235427240_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
H1_mix_00006277	chr1	+	1700	15	FSM	ENSG00000284770.2	ENST00000366601.8	1683	15	-17	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	55.3242759573416	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAAAGGCTTTGAACCTA	-19	True	NA	0	True	NA	NA	NA	235367412	235448944	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_235367505_235380018_235380150_235401502_235401588_235414432_235414619_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
H1_mix_00006278	chr1	+	2209	8	NNC	ENSG00000077585.14	novel	2033	7	NA	NA	-182	0	at_least_one_novel_splicesite	FALSE	non_canonical	2	10	junction_1	15.5733943713276	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTGCATAGTTTTTTTT	NA	False	NA	32	True	ATTAAA	-21	NA	236142322	236208907	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_236142390_236142429_236143037_236168705_236168756_236178413_236178637_236179878_236180029_236183777_236183907_236205125_236205251_236208049
H1_mix_00006279	chr1	+	1107	5	FSM	ENSG00000077585.14	ENST00000419162.5	1107	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	22.9932055181525	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGATGATGACCTTGCC	1	True	NA	NA	False	NA	NA	NA	236142504	236205198	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_236143037_236178413_236178637_236179878_236180029_236183777_236183907_236205125
H1_mix_00006284	chr1	+	1072	3	FSM	ENSG00000116977.19	ENST00000489586.6	1072	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTCTCAGTCCTTGCCAT	7183	False	NA	16	True	NA	NA	NA	236543026	236548295	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_236543649_236544749_236544916_236548011
H1_mix_00006285	chr1	+	4495	19	FSM	ENSG00000077522.15	ENST00000683111.1	4488	19	-7	0	0	0	multi-exon	TRUE	canonical	2	8	junction_1	3.96473653632485	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTTCTAAATTAAACTTAA	176	False	NA	NA	False	ATTAAA	-10	NA	236686674	236764595	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_236686800_236717857_236717973_236718893_236719014_236720104_236720192_236725932_236726021_236731232_236731315_236737121_236737215_236739301_236739533_236742895_236743044_236744625_236744777_236747666_236747776_236749123_236749265_236751469_236751653_236753946_236754082_236755018_236755199_236757485_236757633_236759723_236759790_236761014_236761174_236762460
H1_mix_00006287	chr1	+	3360	30	FSM	ENSG00000116984.15	ENST00000681177.1	3360	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	14.9839390828965	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTTTTTTTTGCCT	217	False	NA	NA	False	NA	NA	NA	236795703	236897644	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_236795738_236803427_236803643_236806143_236806234_236808703_236808774_236810502_236810596_236812737_236812845_236815603_236815664_236816448_236816544_236824118_236824220_236825337_236825400_236826828_236826897_236829188_236829269_236831965_236832079_236835546_236835688_236838413_236838600_236859832_236859923_236861124_236861278_236862235_236862344_236863453_236863555_236873772_236873841_236874725_236874847_236880754_236880837_236885120_236885220_236886291_236886368_236889180_236889337_236891132_236891330_236894356_236894558_236895357_236895551_236897005_236897119_236897557
H1_mix_00006288	chr1	+	3609	31	FSM	ENSG00000116984.15	ENST00000679842.1	3609	31	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_22	13.8326907481275	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTTTTTTTTGCCT	217	False	NA	NA	False	NA	NA	NA	236795703	236897644	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_236795738_236803427_236803643_236806143_236806234_236808703_236808774_236810502_236810596_236812737_236812845_236815603_236815664_236816448_236816544_236824118_236824220_236825337_236825400_236826828_236826897_236829188_236829269_236831965_236832079_236835546_236835688_236838413_236838600_236850343_236850524_236852520_236852638_236852947_236853089_236859832_236859923_236861124_236861278_236862235_236862344_236863453_236863555_236880754_236880837_236885120_236885220_236886291_236886368_236889180_236889337_236891132_236891330_236894356_236894558_236895357_236895551_236897005_236897119_236897557
H1_mix_00006289	chr1	+	3449	16	FSM	ENSG00000174371.17	ENST00000366548.8	3449	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	48.4268061672	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTAGAGGAAATCACTGTG	-8	True	NA	NA	False	AGTAAA	-15	NA	241848203	241889939	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_241848354_241848730_241849028_241849111_241849217_241850408_241850587_241852291_241852412_241853357_241853482_241857344_241857483_241858505_241858719_241860516_241860705_241861405_241861503_241866829_241867056_241872031_241872279_241878748_241879344_241881915_241882018_241885313_241885508_241889464
H1_mix_00006290	chr1	+	4184	16	NIC	ENSG00000174371.17	novel	3449	16	NA	NA	0	732	combination_of_known_junctions	FALSE	canonical	3	53	junction_2	40.4291424044037	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACTCACTAAAAATGCTAC	-8	True	NA	32	True	AATAAA	-43	NA	241848203	241890671	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_241848354_241848730_241849028_241849108_241849217_241850408_241850587_241852291_241852412_241853357_241853482_241857344_241857483_241858505_241858719_241860516_241860705_241861405_241861503_241866829_241867056_241872031_241872279_241878748_241879344_241881915_241882018_241885313_241885508_241889464
H1_mix_00006294	chr1	+	2581	18	FSM	ENSG00000054282.16	ENST00000366541.8	2581	18	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	17.8119745111585	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGTTGTAATGTTTCCT	-22	True	NA	23	True	AATAAA	-16	NA	243256040	243500091	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_243256241_243270104_243270258_243270977_243271064_243274542_243274657_243286271_243286398_243293090_243293220_243304712_243304778_243307988_243308178_243316754_243316894_243330539_243330693_243341038_243341174_243344214_243344332_243378720_243378864_243415701_243415830_243417967_243418077_243426426_243426559_243489013_243489141_243499755
H1_mix_00006295	chr1	+	2422	17	NIC	ENSG00000054282.16	novel	2581	18	NA	NA	24	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	19.1261233330228	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGACTTGAGTTGTAATG	2	True	NA	17	True	AATAAA	-10	NA	243256064	243500085	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_243256241_243270104_243270258_243270977_243271064_243274542_243274657_243286271_243286398_243304712_243304778_243307988_243308178_243316754_243316894_243330539_243330693_243341038_243341174_243344214_243344332_243378720_243378864_243415701_243415830_243417967_243418077_243426426_243426559_243489013_243489141_243499755
H1_mix_00006297	chr1	+	2453	17	NIC	ENSG00000054282.16	novel	2581	18	NA	NA	95	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	20.6998641299889	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGTGGGCTGTAGTGATT	-1	True	NA	NA	False	ATTAAA	-22	NA	243256135	243476360	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_243256241_243270104_243270258_243270977_243271064_243274542_243274657_243286271_243286398_243293090_243293220_243304712_243304778_243307988_243308178_243316754_243316894_243330539_243330693_243341038_243341174_243344214_243344332_243378720_243378864_243415701_243415830_243417967_243418077_243426426_243426559_243475930
H1_mix_00006300	chr1	+	6167	8	FSM	ENSG00000203666.13	ENST00000366522.6	6167	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_7	85.4481582897024	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACTCTAGGGAAGTTTTT	-2	True	NA	NA	False	AGTAAA	-7	NA	244969981	245127164	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_244970444_245002120_245002233_245017241_245017327_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245121919
H1_mix_00006302	chr1	+	2417	7	NIC	ENSG00000203666.13	novel	860	8	NA	NA	0	1201	combination_of_known_junctions	FALSE	canonical	3	21	junction_6	74.4311762637136	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGCTATGACACAAATAA	-6	True	NA	9	True	AATAAA	-22	NA	244970355	245093007	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_244970444_245017241_245017327_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245091026
H1_mix_00006311	chr1	-	1005	5	NNC	ENSG00000241860.7	novel	821	3	NA	NA	-15	6960	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_4	39.7578608579486	80	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACCTTTCATTGCGAGTA	NA	False	NA	NA	False	NA	NA	NA	169255	158530	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_158675_164262_164792_165883_165943_168099_168166_169048
H1_mix_00006313	chr1	-	793	5	FSM	ENSG00000237094.12	ENST00000440038.7	793	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	28.0935935757603	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACACACCCAGCTCCTGCC	NA	False	NA	NA	False	NA	NA	NA	502508	494463	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_494899_494991_495050_497108_497300_501555_501621_502464
H1_mix_00006320	chr1	-	238	3	FSM	ENSG00000230092.7	ENST00000590817.3	238	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGTTCTATTTCAAAA	NA	False	NA	NA	False	NA	NA	NA	810161	805798	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_805892_808573_808624_810066
H1_mix_00006321	chr1	-	3186	1	FSM	ENSG00000225880.5	ENST00000473798.1	1317	1	11	-1880	11	1880	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATATATGTAAAATGAATTT	4	True	NA	NA	False	AATAAA	-18	NA	827511	824325	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_824300_827500
H1_mix_00006322	chr1	-	4203	17	FSM	ENSG00000188976.11	ENST00000477976.5	4201	17	0	-2	0	0	multi-exon	TRUE	canonical	3	22	junction_13	423.302418490611	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGCTCCTGGAGATTT	8521	False	NA	-14	True	AATAAA	-29	NA	958458	944202	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_944801_945041_945147_945517_945654_946172_946287_946401_946546_948130_948233_948489_948604_951126_951239_951999_952140_952411_952601_953174_953289_953781_953893_954003_954524_955922_956014_956094_956216_956893_957026_957098
H1_mix_00006325	chr1	-	2895	3	FSM	ENSG00000131591.18	ENST00000487177.5	3315	3	432	-12	432	5	multi-exon	FALSE	canonical	3	82	junction_2	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGCTCTCTCCCGTAGG	4824	False	NA	-6	True	TATAAA	-26	NA	1087204	1081812	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1084507_1085877_1086013_1087138
H1_mix_00006327	chr1	-	693	5	FSM	ENSG00000186891.14	ENST00000379265.5	705	5	12	0	12	0	multi-exon	FALSE	canonical	3	4	junction_1	2.58602010819715	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCCGTCCTCCGGGGC	17	True	NA	NA	False	NA	NA	NA	1206559	1203843	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1203969_1204054_1204237_1204398_1204487_1205369_1205493_1206384
H1_mix_00006328	chr1	-	679	3	FSM	ENSG00000184163.3	ENST00000462849.1	682	3	0	3	0	0	multi-exon	FALSE	canonical	3	23	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTCGAGTGCTGCCTG	3260	False	NA	-9	True	AATAAA	-20	NA	1243463	1242448	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1242647_1242834_1242914_1243061
H1_mix_00006329	chr1	-	859	8	NNC	ENSG00000184163.3	novel	1036	8	NA	NA	-471	-8	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	10.3490115864428	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCCTCCCCACTGCCTTC	NA	False	NA	-21	True	AATAAA	-8	NA	1247193	1242460	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_1242647_1242834_1242914_1243061_1243167_1243443_1243553_1243953_1244106_1244190_1244276_1244380_1244498_1247167
H1_mix_00006330	chr1	-	2443	2	FSM	ENSG00000160087.21	ENST00000467339.1	515	2	-576	-1352	-576	0	multi-exon	FALSE	canonical	3	505	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATGCTGCTTGTGTCTG	NA	False	NA	-6	True	AAAAAG	-28	NA	1256911	1253911	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1255488_1256044
H1_mix_00006331	chr1	-	2452	8	FSM	ENSG00000160087.21	ENST00000450390.6	2455	8	0	3	0	0	multi-exon	FALSE	canonical	2	5	junction_6	249.571305912146	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATGCTGCTTGTGTCTG	-9	True	NA	-6	True	AAAAAG	-28	NA	1273853	1253911	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1255488_1256044_1256126_1256991_1257131_1257207_1257311_1263345_1263387_1266097_1266291_1267861_1267993_1273665
H1_mix_00006332	chr1	-	2389	7	FSM	ENSG00000160087.21	ENST00000347370.6	2387	7	0	-2	0	0	multi-exon	FALSE	canonical	3	18	junction_5	203.981004017531	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATGCTGCTTGTGTCTG	-10	True	NA	-6	True	AAAAAG	-28	NA	1273854	1253911	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1255488_1256044_1256126_1256991_1257131_1257207_1257311_1263345_1263387_1267732_1267993_1273665
H1_mix_00006336	chr1	-	492	4	FSM	ENSG00000131584.19	ENST00000379037.6	492	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	58.4598627740055	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATCCACAGGTGGGCCCC	9770	False	NA	NA	False	NA	NA	NA	1298265	1296435	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1296634_1297821_1297934_1298012_1298114_1298184
H1_mix_00006337	chr1	-	1369	5	NNC	ENSG00000131584.19	novel	819	6	NA	NA	69	-29	intron_retention	FALSE	canonical	3	17	junction_2	44.7800178651148	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGGACCCCCGCTGGGCC	8487	False	NA	NA	False	NA	NA	NA	1299548	1296494	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_1296634_1297821_1297934_1298029_1298114_1298369_1298422_1298566
H1_mix_00006339	chr1	-	816	7	FSM	ENSG00000127054.22	ENST00000531377.5	816	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	204.339926484169	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGCAGCCGGGCGGGCGG	5311	False	NA	NA	False	NA	NA	NA	1319346	1312786	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1312950_1313034_1313125_1313508_1313593_1313731_1313922_1314823_1314963_1315519_1315619_1319295
H1_mix_00006342	chr1	-	704	4	FSM	ENSG00000127054.22	ENST00000490853.5	704	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	227.863019280346	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCGAGGCCAACTTCTTCA	8	True	NA	NA	False	NA	NA	NA	1324649	1319380	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1319844_1320455_1320530_1320995_1321094_1324580
H1_mix_00006344	chr1	-	4706	14	NIC	ENSG00000107404.21	novel	2926	15	NA	NA	-12	1	intron_retention	FALSE	canonical	3	87	junction_3	31.0647348528728	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTGGCCTGTGCCCCTT	9116	False	NA	0	True	AAAAAG	-21	NA	1349430	1335274	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_1338184_1338268_1338437_1338521_1338654_1339361_1339440_1339581_1339650_1339735_1339813_1340037_1340178_1340246_1340317_1340409_1340504_1341666_1341806_1342052_1342157_1342362_1342485_1342688_1342759_1348895
H1_mix_00006347	chr1	-	531	3	FSM	ENSG00000107404.21	ENST00000633096.1	580	3	49	0	49	0	multi-exon	FALSE	canonical	3	192	junction_2	3.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCACCCTGTCCATCTGT	9127	False	NA	NA	False	NA	NA	NA	1340316	1339491	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1339813_1340037_1340178_1340246
H1_mix_00006348	chr1	-	2071	9	FSM	ENSG00000162576.17	ENST00000342753.8	2231	9	159	1	-80	-1	multi-exon	FALSE	canonical	3	12	junction_7	37.886136976472	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTCCCAGGTATGCTTC	3162	False	NA	-12	True	AATAAA	-20	NA	1358635	1352689	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1353630_1353847_1353929_1354029_1354107_1354192_1354233_1354353_1354510_1354681_1355153_1355243_1355346_1356680_1356705_1358455
H1_mix_00006351	chr1	-	2912	12	NIC	ENSG00000221978.13	novel	2815	12	NA	NA	9	2	intron_retention	FALSE	canonical	3	95	junction_6	365.096817228545	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTAAAGCTATGTATGAAAA	8526	False	NA	-45	True	AATAAA	-17	NA	1399300	1386710	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_1387583_1387776_1387870_1387953_1388066_1390229_1390372_1390458_1390564_1390765_1391576_1392678_1392804_1393395_1393461_1395393_1395515_1398232_1398343_1398596_1398672_1399018
H1_mix_00006352	chr1	-	3595	12	NIC	ENSG00000221978.13	novel	2815	12	NA	NA	0	2	intron_retention	FALSE	canonical	3	40	junction_6	379.673609284049	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTAAAGCTATGTATGAAAA	12	True	NA	-45	True	AATAAA	-17	NA	1399311	1386710	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_1387583_1387776_1387870_1387953_1388066_1390229_1390372_1390458_1390564_1390765_1390866_1391296_1392804_1393395_1393461_1395393_1395515_1398232_1398343_1398596_1398672_1399018
H1_mix_00006354	chr1	-	1697	3	FSM	ENSG00000242485.6	ENST00000487659.1	1693	3	0	-4	0	0	multi-exon	FALSE	canonical	3	1624	junction_1	39.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTAGAGTCATTTTCTG	6	True	NA	-12	True	AATGAA	-17	NA	1407268	1401908	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1402257_1405808_1407020_1407130
H1_mix_00006356	chr1	-	1392	4	FSM	ENSG00000205090.9	ENST00000378733.9	1381	4	0	-11	0	11	multi-exon	FALSE	canonical	1	1	junction_2	8.25967446224258	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTCACCTTTGACCCCA	-12	True	NA	11	True	AGTAAA	-29	NA	1540624	1534766	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1535508_1535588_1535798_1539683_1539791_1540289
H1_mix_00006357	chr1	-	2817	19	FSM	ENSG00000248333.9	ENST00000611150.3	2350	19	-316	-151	-316	0	multi-exon	FALSE	canonical	3	16	junction_14	48.826096038092	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTGTTTTCTCCGTGA	NA	False	NA	NA	False	ATTAAA	-25	NA	1659328	1635586	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1635857_1635936_1636127_1636332_1636482_1636681_1636799_1636896_1637005_1637080_1637203_1637407_1637514_1637761_1637884_1638499_1638591_1640276_1640453_1641047_1641114_1641661_1641821_1641905_1642002_1642385_1642509_1649498_1649638_1652438_1652567_1655368_1655485_1657374_1657499_1658913
H1_mix_00006360	chr1	-	1500	11	NIC	ENSG00000008128.23	novel	2653	19	NA	NA	47	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_4	62.6291465693091	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTGTTTTCTCCGTGA	7649	False	NA	NA	False	ATTAAA	-25	NA	1708829	1702729	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_1703000_1703079_1703270_1703475_1703625_1703823_1703996_1704222_1704345_1704549_1704656_1704903_1705026_1705641_1705733_1707408_1707585_1708179_1708246_1708793
H1_mix_00006365	chr1	-	2333	20	FSM	ENSG00000008128.23	ENST00000460465.5	2333	20	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_9	52.8516975986408	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTCAGCCGGGACCACA	0	True	NA	NA	False	NA	NA	NA	1724324	1702880	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1703000_1703079_1703270_1703475_1703625_1703823_1703941_1704038_1704147_1704222_1704345_1704549_1704656_1704903_1705026_1705641_1705733_1707524_1707585_1708179_1708246_1708793_1708953_1709037_1709134_1709517_1709641_1712263_1712401_1716345_1716479_1719327_1719456_1721595_1721712_1722707_1722832_1724257
H1_mix_00006366	chr1	-	2419	20	FSM	ENSG00000008128.23	ENST00000358779.9	2419	20	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_16	48.4825696182319	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTCAGCCGGGACCACA	0	True	NA	NA	False	NA	NA	NA	1724324	1702880	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1703000_1703079_1703270_1703475_1703625_1703823_1703941_1704038_1704147_1704222_1704345_1704549_1704656_1704903_1705026_1705641_1705733_1707408_1707585_1708179_1708246_1708793_1708953_1709037_1709134_1709517_1709641_1712263_1712401_1716345_1716479_1719357_1719456_1721595_1721712_1722707_1722832_1724257
H1_mix_00006367	chr1	-	2458	20	FSM	ENSG00000008128.23	ENST00000378633.5	2458	20	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_13	53.8163492442899	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTCAGCCGGGACCACA	0	True	NA	NA	False	NA	NA	NA	1724324	1702880	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1703000_1703079_1703270_1703475_1703625_1703823_1703941_1704038_1704147_1704222_1704345_1704549_1704656_1704903_1705026_1705641_1705733_1707408_1707585_1708179_1708246_1708793_1708953_1709037_1709134_1709478_1709641_1712263_1712401_1716345_1716479_1719357_1719456_1721595_1721712_1722707_1722832_1724257
H1_mix_00006372	chr1	-	897	5	FSM	ENSG00000008128.23	ENST00000468800.5	897	5	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	29.4225678688995	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGCCAAGGTGAGTCCTG	8917	False	NA	NA	False	NA	NA	NA	1707561	1704048	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1704147_1704222_1704656_1704903_1705026_1705641_1705733_1707408
H1_mix_00006375	chr1	-	5443	12	Fusion	ENSG00000008130.15_ENSG00000215790.8	novel	3235	12	NA	NA	0	282	multi-exon	FALSE	non_canonical	0	0	junction_8	172.64591385332	153	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTTGCAAAGGGTACTT	4505	False	NA	NA	False	NA	NA	NA	1754383	1731545	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_-_1732524_1734689_1734836_1735203_1735739_1738320_1738449_1738921_1739058_1739235_1739705_1744250_1744669_1745723_1746195_1751239_1753061_1753566_1753650_1754050_1754209_1754283
H1_mix_00006376	chr1	-	3185	13	NNC	ENSG00000078369.18	novel	3163	12	NA	NA	0	52392	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	730.88364992126	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGAGACTTTTTGGTGG	7	True	NA	NA	False	NA	NA	NA	1891087	1732892	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_1732917_1785287_1787054_1787321_1787438_1789052_1789270_1790394_1790597_1793244_1793312_1804418_1804582_1806474_1806539_1815755_1815863_1817836_1817876_1825396_1825500_1839189_1839239_1890819
H1_mix_00006377	chr1	-	3292	12	NIC	ENSG00000008130.15	novel	3235	12	NA	NA	-72	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	160.58555043423	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTTAATAACAGCTTTCT	2	True	NA	NA	False	AATAAA	-22	NA	1780141	1751229	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_1753061_1753566_1753650_1754050_1754209_1754283_1754384_1754543_1754699_1755373_1755477_1756257_1756344_1756502_1756609_1757180_1757311_1761951_1762036_1765227_1765447_1779904
H1_mix_00006386	chr1	-	3122	11	NIC	ENSG00000078369.18	novel	3163	12	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	27	junction_8	791.263224218085	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTGGTGTGGTGATTAT	7	True	NA	-6	True	AATAAA	-17	NA	1891087	1785287	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_1787054_1787321_1787438_1789052_1789270_1790394_1790597_1793244_1793312_1804418_1804582_1806474_1806539_1815755_1815863_1825396_1825500_1839189_1839239_1890819
H1_mix_00006389	chr1	-	1496	3	NIC	ENSG00000178821.13	novel	878	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	30	junction_2	23.5	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGCCTATGTGGGAAGG	5	True	NA	-9	True	AATAAA	-17	NA	1919269	1917590	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_1918163_1918252_1919089_1919181
H1_mix_00006392	chr1	-	811	4	FSM	ENSG00000162585.17	ENST00000400918.7	811	4	0	0	0	0	multi-exon	TRUE	canonical	3	43	junction_1	512.693107250548	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCTCCCAGCAGCGCCC	311	False	NA	NA	False	NA	NA	NA	2194751	2185174	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_2185514_2193638_2193911_2193997_2194134_2194687
H1_mix_00006393	chr1	-	1236	3	FSM	ENSG00000162585.17	ENST00000476803.1	701	3	-535	0	0	0	multi-exon	FALSE	canonical	3	1193	junction_2	108	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTGTGTTGTGATGAA	-5	True	NA	-35	True	ATTAAA	-19	NA	2194748	2189568	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_2189782_2193638_2193911_2193997
H1_mix_00006394	chr1	-	2798	1	FSM	ENSG00000269896.2	ENST00000602865.1	2407	1	-443	52	-443	-52	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCAGAAACCTGCCTTTC	NA	False	NA	-65	True	NA	NA	NA	2353263	2350465	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_2350500_2353300
H1_mix_00006396	chr1	-	2537	18	NIC	ENSG00000157881.16	novel	2641	19	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	2	17	junction_17	44.1015656965352	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGAGCCATCTGCGATGT	3687	False	NA	-9	True	AATAGA	-14	NA	2526575	2508536	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_2509061_2509861_2509931_2510056_2510158_2510677_2510783_2511337_2511388_2511627_2511684_2512887_2513040_2514001_2514090_2514353_2514467_2515561_2515718_2518163_2518265_2518515_2518598_2519142_2519325_2519800_2519955_2520321_2520415_2520722_2520907_2521100_2521316_2526463
H1_mix_00006407	chr1	-	1321	1	FSM	ENSG00000227372.12	ENST00000624167.1	988	1	-337	4	-337	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGGGAATTTGCATTTT	NA	False	NA	-8	True	TATAAA	-25	NA	3736925	3735604	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_3735600_3736900
H1_mix_00006408	chr1	-	3719	5	FSM	ENSG00000227372.12	ENST00000648479.1	3719	5	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_1	64.165313838553	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGGGAAAACCATCCGCC	651	False	NA	-89	True	NA	NA	NA	3746714	3735685	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_3737855_3740232_3740388_3742803_3742961_3743060_3743191_3745606
H1_mix_00006412	chr1	-	1569	4	FSM	ENSG00000130764.10	ENST00000462356.5	575	4	-79	-915	-79	915	multi-exon	FALSE	canonical	3	527	junction_1	27.3536509852382	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTTGTGTAAAGACTCT	NA	False	NA	-3	True	AATAAA	-16	NA	3784254	3780219	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_3781337_3781511_3781602_3782660_3782764_3783995
H1_mix_00006418	chr1	-	1415	5	NNC	ENSG00000116198.14	novel	1661	4	NA	NA	194	43	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	44.3113980822091	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATTTATTGTCCTTATGT	385	False	NA	NA	False	AATAAA	-17	NA	3857000	3846533	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_3847397_3847474_3847614_3848607_3848782_3852294_3852422_3856888
H1_mix_00006419	chr1	-	1800	5	FSM	ENSG00000198912.12	ENST00000680054.1	1779	5	0	-21	0	1	multi-exon	FALSE	canonical	2	3	junction_3	147.055261721572	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAAAGCAGTCGTATGTT	-12	True	NA	-9	True	AATAAA	-18	NA	3900272	3889131	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_3890074_3890568_3891058_3891625_3891780_3892882_3892997_3900171
H1_mix_00006420	chr1	-	1512	3	FSM	ENSG00000198912.12	ENST00000680535.1	1512	3	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_2	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTACTGTGCCAATGTC	2	True	NA	NA	False	ACTAAA	-29	NA	3900258	3889746	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_3891058_3892882_3892997_3900171
H1_mix_00006421	chr1	-	570	2	FSM	ENSG00000131697.18	ENST00000506941.1	570	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGTGGAGATCGACAAC	NA	False	NA	NA	False	NA	NA	NA	5877466	5874904	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_5875101_5877092
H1_mix_00006422	chr1	-	3551	6	NNC	ENSG00000116237.16	novel	4795	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	220.644873042634	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGTGTGATTGTCTGGG	13	True	NA	-4	True	AATAAA	-22	NA	6235964	6221192	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_6222158_6223401_6225263_6231901_6232120_6233473_6233644_6234885_6234975_6235716
H1_mix_00006424	chr1	-	3567	6	NNC	ENSG00000116237.16	novel	4795	5	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	220.644873042634	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGTGTGATTGTCTGGG	-18	True	NA	-4	True	AATAAA	-22	NA	6235995	6221192	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_6222154_6223412_6225263_6231901_6232120_6233473_6233644_6234885_6234975_6235716
H1_mix_00006425	chr1	-	2638	6	NNC	ENSG00000116237.16	novel	2612	6	NA	NA	15	53	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_5	245.698514444023	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCATTGATTGGTTTGAAA	28	True	NA	14	True	AATGAA	-37	NA	6235949	6223437	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_6225263_6231901_6232120_6233473_6233644_6234404_6234512_6234885_6234971_6235716
H1_mix_00006426	chr1	-	1429	10	NNC	ENSG00000097021.20	novel	1472	10	NA	NA	0	8627	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	214.590623752458	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCCAGGCATAGTGGTGC	-10	True	NA	NA	False	NA	NA	NA	6393361	6255641	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_6255671_6264271_6264696_6281101_6281287_6294863_6294981_6318491_6318579_6327298_6327414_6333476_6333569_6339432_6339590_6349748_6349867_6393256
H1_mix_00006427	chr1	-	1428	10	NNC	ENSG00000097021.20	novel	1472	10	NA	NA	0	8627	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	214.590623752458	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCCAGGCATAGTGGTGC	-10	True	NA	NA	False	NA	NA	NA	6393361	6255641	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_6255670_6264271_6264696_6281101_6281287_6294863_6294981_6318491_6318579_6327298_6327414_6333476_6333569_6339432_6339590_6349748_6349867_6393256
H1_mix_00006428	chr1	-	266	3	FSM	ENSG00000069812.11	ENST00000377836.8	507	3	20	221	20	-171	multi-exon	FALSE	canonical	1	1	junction_1	1	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCTCCTGAGCAGCCCC	34	False	NA	NA	False	NA	NA	NA	6419883	6413220	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_6413283_6419606_6419703_6419775
H1_mix_00006431	chr1	-	6887	28	Fusion	ENSG00000171680.23_ENSG00000215788.11	novel	3699	21	NA	NA	-84	0	intron_retention	FALSE	canonical	2	11	junction_27	23.5660354046106	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCTTCTTGGCGTTTCTGC	7019	False	NA	NA	False	ATTAAA	-31	NA	6490678	6461150	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_-_6461763_6461993_6462175_6462628_6462664_6462862_6463128_6464374_6464454_6464551_6464720_6465087_6465223_6465439_6465561_6466068_6467573_6467824_6469242_6469334_6469451_6469543_6469677_6470235_6470356_6470505_6470644_6470734_6470885_6470989_6471101_6471487_6471638_6471757_6471809_6472526_6472623_6472985_6473175_6473250_6473455_6474012_6474165_6474450_6474588_6475046_6475139_6475461_6475523_6475930_6476037_6477528_6477659_6490444
H1_mix_00006437	chr1	-	3699	21	FSM	ENSG00000171680.23	ENST00000340850.10	3699	21	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_20	15.1178702203717	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGAAGAGTCCTTTGCTT	7103	False	NA	-1	True	TATAAA	-18	NA	6490594	6467121	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_6467573_6467824_6468587_6469041_6469242_6469334_6469451_6469543_6469677_6470235_6470356_6470505_6470644_6470734_6470885_6470989_6471101_6471487_6471638_6471757_6471809_6472526_6472623_6472985_6473175_6473250_6473455_6474012_6474165_6474450_6474588_6475046_6475139_6475461_6475523_6475930_6476037_6477528_6477659_6490444
H1_mix_00006442	chr1	-	3915	10	NNC	ENSG00000162408.11	novel	6627	12	NA	NA	-693	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	6	junction_1	23.8425907946781	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTGTGTAATTTTATG	9061	False	NA	0	True	ATTAAA	-19	NA	6545710	6521346	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_6522617_6525103_6526004_6526695_6526830_6528993_6529172_6531967_6532080_6532462_6532761_6533279_6533442_6541829_6541928_6544825_6544923_6545044
H1_mix_00006443	chr1	-	1485	1	ISM	ENSG00000162408.11	ENST00000377705.6	6627	12	31675	7	10547	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGAATTTAGTTGTGTAA	NA	False	NA	-7	True	ATTAAA	-12	NA	6522838	6521353	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_6521400_6522800
H1_mix_00006444	chr1	-	835	5	FSM	ENSG00000162408.11	ENST00000464383.1	835	5	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	13.9171656597168	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTACATAGCCTGACACC	9754	False	NA	NA	False	NA	NA	NA	6545017	6531994	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_6532080_6532462_6532761_6533279_6533442_6541829_6541928_6544825
H1_mix_00006446	chr1	-	742	4	FSM	ENSG00000007923.17	ENST00000465911.1	745	4	0	3	0	-3	multi-exon	FALSE	canonical	2	22	junction_1	420.155526759635	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCTGTAATATCTTATT	-6	True	NA	NA	False	AATAAA	-13	NA	6701819	6670463	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_6670911_6678393_6678468_6680907_6681038_6701728
H1_mix_00006447	chr1	-	681	2	NIC	ENSG00000237436.1	novel	415	3	NA	NA	-163	0	intron_retention	FALSE	canonical	3	12	junction_1	0	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGTGTTACACACTCA	NA	False	NA	1	True	AATAAA	-16	NA	6785006	6783891	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_6784224_6784657
H1_mix_00006448	chr1	-	1721	1	FSM	ENSG00000270171.1	ENST00000602640.1	1721	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTCAGTCTTGGCTATGT	9710	False	NA	NA	False	ATTAAA	-18	NA	7694844	7693123	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_7693100_7694800
H1_mix_00006453	chr1	-	8016	24	FSM	ENSG00000142599.19	ENST00000337907.7	8026	24	0	10	0	-1	multi-exon	FALSE	canonical	0	0	junction_22	34.8133559751614	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACCCTTGGGTGTCTCCCG	252	False	NA	-8	True	AATAAA	-15	NA	8817465	8352406	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_8355121_8355418_8355600_8356099_8356247_8358195_8358917_8359763_8359987_8360111_8361491_8361762_8361877_8362682_8362845_8364055_8364256_8364745_8364839_8365811_8365975_8422726_8422808_8465924_8466024_8495062_8495163_8497404_8497530_8508626_8508676_8541213_8541319_8556474_8556572_8557417_8557524_8614560_8614687_8624309_8624381_8655972_8656442_8792403_8792589_8817159
H1_mix_00006459	chr1	-	3771	1	FSM	ENSG00000284357.1	ENST00000385130.1	110	1	-19	-3642	-19	3642	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTATTAAAAATGTAAGTATA	NA	False	NA	NA	False	AATAAA	-4	NA	9151796	9148025	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_9148000_9151800
H1_mix_00006460	chr1	-	314	2	FSM	ENSG00000228526.7	ENST00000437157.3	409	2	95	0	95	0	multi-exon	FALSE	canonical	1	1	junction_1	0	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAACGCTTGTGTTTCTCA	NA	False	NA	NA	False	NA	NA	NA	9183655	9182006	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_9182296_9183630
H1_mix_00006461	chr1	-	532	2	NIC	ENSG00000231789.3	novel	978	3	NA	NA	22	0	combination_of_known_splicesites	FALSE	canonical	3	41	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTCTAATGGTTCATCA	20	False	NA	0	True	AATAAA	-33	NA	9687551	9672404	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_9672720_9687334
H1_mix_00006462	chr1	-	1628	2	ISM	ENSG00000231789.3	ENST00000415330.3	978	3	20	7322	20	-7322	5prime_fragment	FALSE	canonical	3	82	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGACGAGGAAGAAGAGGA	18	False	NA	NA	False	AATAAA	-17	NA	9687553	9679726	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_9681136_9687334
H1_mix_00006463	chr1	-	4663	19	NNC	ENSG00000171603.18	novel	4760	19	NA	NA	0	26427	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	173.878274436422	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTCTTTCCTTGGAAGT	1	True	NA	NA	False	AAAAAG	-2	NA	9823965	9702498	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_9702532_9729025_9730706_9731205_9731391_9731760_9731897_9733400_9733547_9733971_9734143_9734947_9735175_9735466_9735616_9735884_9736043_9737497_9737555_9741093_9741257_9743883_9744006_9744394_9744644_9749460_9749647_9749763_9749914_9751472_9751682_9755113_9755310_9773271_9773395_9823642
H1_mix_00006464	chr1	-	2996	6	NNC	ENSG00000178585.15	novel	3006	6	NA	NA	0	76135	intron_retention	FALSE	non_canonical	0	0	junction_1	279.323038792005	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGGGTGTGGTGGTGGGCG	-36	True	NA	NA	False	ACTAAA	-24	NA	9910269	9772140	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_9772167_9848277_9850777_9871186_9871278_9871968_9872089_9877904_9877990_9910094
H1_mix_00006466	chr1	-	655	5	FSM	ENSG00000162441.12	ENST00000488540.5	652	5	0	-3	0	3	multi-exon	FALSE	canonical	3	12	junction_1	59.5105032746321	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGCCGGGTGTGGTGGCTT	7740	False	NA	0	True	AATAAA	-26	NA	9935620	9922109	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_9922359_9931890_9931973_9932802_9932899_9934761_9934861_9935491
H1_mix_00006468	chr1	-	7907	21	FSM	ENSG00000130940.15	ENST00000377022.8	7934	21	29	-2	29	2	multi-exon	FALSE	canonical	1	3	junction_3	10.4655386865655	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAAGTTATCTTTTATTC	0	True	NA	NA	False	AATAAA	-16	NA	10796617	10636601	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_10640060_10642858_10643001_10643159_10643312_10644916_10645089_10646127_10646327_10647800_10648140_10649069_10649193_10649282_10649438_10650691_10650756_10650940_10651077_10653376_10654219_10654418_10654592_10655648_10655814_10656645_10656737_10658507_10658577_10659701_10660537_10665082_10665572_10693873_10693913_10705491_10705545_10760700_10760858_10796563
H1_mix_00006470	chr1	-	2721	24	FSM	ENSG00000171824.14	ENST00000304457.11	2721	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	146.704814022809	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATTCCTGACTTTTATT	-15	True	NA	NA	False	ATTAAA	-17	NA	11099869	11066617	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_11066749_11068007_11068085_11068644_11068707_11069558_11069731_11070899_11070974_11072086_11072172_11074230_11074327_11076841_11076949_11077364_11077444_11077600_11077652_11079710_11079823_11080498_11080550_11080763_11080913_11081081_11081239_11082687_11082879_11087447_11087592_11087799_11087911_11088122_11088199_11090553_11090669_11091013_11091180_11091492_11091598_11095757_11095882_11098019_11098157_11099720
H1_mix_00006472	chr1	-	401	5	FSM	ENSG00000171824.14	ENST00000470611.5	401	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	283.285522926958	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTGCACAGAAAAAAGCCCA	NA	False	NA	NA	False	AGTAAA	-16	NA	11079800	11074287	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_11074327_11076841_11076949_11077329_11077444_11077600_11077652_11079710
H1_mix_00006475	chr1	-	1329	7	NNC	ENSG00000116661.11	novel	1287	6	NA	NA	0	-1895	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	159.53134488244	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGGGGAAGCCGGCAGG	0	True	NA	NA	False	AAAAAG	-32	NA	11654429	11638912	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_11638938_11648369_11648829_11649086_11649226_11649778_11649875_11649944_11650075_11650465_11650835_11654318
H1_mix_00006476	chr1	-	1621	7	NNC	ENSG00000116661.11	novel	1287	6	NA	NA	-304	3394	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	159.53134488244	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAATAAAATTGAAGCA	85	False	NA	NA	False	AAAAAG	-8	NA	11654733	11644992	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_11645026_11648389_11648829_11649086_11649226_11649778_11649875_11649944_11650075_11650465_11650835_11654318
H1_mix_00006477	chr1	-	725	3	FSM	ENSG00000116661.11	ENST00000471501.1	725	3	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_1	0.5	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAAAATCAGTCTGCGGT	4105	False	NA	NA	False	AATATA	-38	NA	11650713	11649527	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_11649875_11649944_11650075_11650465
H1_mix_00006480	chr1	-	1095	4	FSM	ENSG00000116670.15	ENST00000376655.1	1095	4	0	0	0	0	multi-exon	FALSE	canonical	3	950	junction_3	1061.0153418097	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTCCACTGCTGTCCA	213	False	11691624	NA	False	GATAAA	-39	NA	11691593	11676871	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_11677615_11680352_11680472_11680561_11680614_11691412
H1_mix_00006481	chr1	-	7482	10	NNC	ENSG00000177000.13	novel	7044	12	NA	NA	1444	14648	intron_retention	TRUE	non_canonical	0	0	junction_1	11.0229838446541	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATATATATATATATAT	4327	False	NA	NA	False	NA	NA	NA	11801939	11771074	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_11771098_11785729_11790899_11791206_11791327_11792277_11792380_11793906_11794090_11794357_11794539_11794728_11795349_11796205_11796400_11800211_11800323_11801160
H1_mix_00006483	chr1	-	5122	2	FSM	ENSG00000116685.16	ENST00000376576.3	2539	2	1	-2584	0	0	multi-exon	FALSE	canonical	3	507	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACCGGTTTGTGTGTGGTT	-12	True	NA	-7	True	AATAAA	-18	NA	11926427	11919590	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_11923490_11925204
H1_mix_00006484	chr1	-	2237	8	NNC	ENSG00000162496.9	novel	2201	6	NA	NA	0	74841	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	213.882286908152	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCACTCAATCGTGGACCA	5	True	NA	NA	False	AATAAA	-30	NA	12618210	12493068	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_12493084_12534509_12534532_12567910_12568425_12572727_12572854_12578717_12578957_12579292_12579413_12580522_12580667_12617153
H1_mix_00006486	chr1	-	1138	4	NIC	ENSG00000162496.9	novel	2201	6	NA	NA	690	-14	combination_of_known_junctions	FALSE	canonical	2	16	junction_2	202.809160433042	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCTTTTGTGATTTCCT	2448	False	NA	-18	True	AATAAA	-5	NA	12617520	12567923	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_12568425_12572727_12572854_12580522_12580667_12617153
H1_mix_00006489	chr1	-	378	1	FSM	ENSG00000272482.1	ENST00000606790.1	345	1	-36	3	-36	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTTGTGGGGATTTTAT	688	False	NA	NA	False	AATAAA	-13	NA	12619280	12618902	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_12618900_12619300
H1_mix_00006492	chr1	-	524	1	FSM	ENSG00000233954.6	ENST00000483273.2	2180	1	1651	5	1651	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTAGCCGGGTGTGGT	2	True	NA	NA	False	AATAAA	-26	NA	15807697	15807173	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_15807200_15807700
H1_mix_00006493	chr1	-	544	4	FSM	ENSG00000116809.12	ENST00000471805.5	544	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	5.09901951359278	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTTGGGGCAGTTCCATG	8545	False	NA	NA	False	NA	NA	NA	15944358	15943239	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_15943520_15943598_15943716_15943807_15943896_15944299
H1_mix_00006494	chr1	-	2706	15	NIC	ENSG00000142632.17	novel	3322	16	NA	NA	-80	-255	intron_retention	FALSE	canonical	3	11	junction_14	62.6260769185176	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGCTTGGAGTCTGTGA	4624	False	NA	-12	True	AATAAA	-12	NA	16212732	16198108	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_16198745_16199149_16199255_16201781_16201862_16202415_16202575_16204758_16204920_16205086_16205177_16205350_16205426_16205537_16205668_16205930_16206084_16206179_16206341_16206947_16207211_16207521_16207599_16207674_16207778_16207943_16208226_16212501
H1_mix_00006495	chr1	-	6565	15	ISM	ENSG00000142632.17	ENST00000270747.8	3322	16	-80	255	-80	-255	intron_retention	FALSE	canonical	3	129	junction_14	42.1182131334061	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGCTTGGAGTCTGTGA	4624	False	NA	-12	True	AATAAA	-12	NA	16212732	16198108	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_16198745_16199149_16199255_16201781_16201862_16202415_16202575_16204758_16204920_16205086_16205177_16205350_16205426_16205537_16205668_16205930_16206084_16206179_16206341_16206947_16207211_16207521_16207599_16207674_16207778_16207943_16208226_16208642
H1_mix_00006497	chr1	-	854	4	NIC	ENSG00000080947.15	novel	5368	15	NA	NA	331	4208	combination_of_known_splicesites	FALSE	canonical	2	6	junction_3	4.89897948556636	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGTCCCTGGTGGGTGCC	6870	False	NA	NA	False	NA	NA	NA	16492370	16486425	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_16486662_16490617_16490784_16490864_16490927_16491980
H1_mix_00006499	chr1	-	477	5	ISM	ENSG00000219481.11	ENST00000392963.5	2672	19	31754	1558	29869	-1558	internal_fragment	FALSE	canonical	3	20	junction_3	12.6565200588471	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGTAACTTTGAGCAATTA	NA	False	NA	NA	False	NA	NA	NA	16573180	16566410	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_16566460_16567178_16567352_16567978_16568031_16569072_16569237_16573141
H1_mix_00006500	chr1	-	2490	16	ISM	ENSG00000219481.11	ENST00000430580.6	5932	29	21265	12175	10827	-9641	internal_fragment	TRUE	canonical	2	6	junction_4	22.2886119402313	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCAGGTAGCCTCTGTTT	87	False	NA	NA	False	NA	NA	NA	16592222	16574493	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_16574693_16575156_16575230_16576266_16576482_16577316_16577420_16579192_16579403_16580744_16580957_16581419_16581493_16582543_16582759_16583593_16583697_16585488_16585699_16587049_16587262_16587724_16587798_16588848_16589064_16589898_16590002_16591846_16592057_16592158
H1_mix_00006502	chr1	-	4352	3	NNC	ENSG00000219481.11	novel	2752	3	NA	NA	0	147	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_1	65	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGGAACATTAAGAGAACAT	24	True	NA	NA	False	NA	NA	NA	16613534	16599441	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_16603325_16608507_16608780_16613337
H1_mix_00006503	chr1	-	2677	13	NIC	ENSG00000215908.10	novel	2575	13	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	3	63	junction_12	28.4237527821754	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCAGTGTTCTCCTGCTGT	14	True	NA	-4	True	AATAAA	-26	NA	16644672	16618252	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_16619104_16619844_16620025_16625774_16626006_16626352_16626500_16627144_16627290_16628467_16628651_16630889_16631110_16631529_16631614_16632274_16632372_16633094_16633347_16635026_16635169_16643027_16643146_16644645
H1_mix_00006504	chr1	-	2865	14	NNC	ENSG00000215908.10	novel	2575	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_10	45.3454850867369	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTCAGTGTTCTCCTGC	0	True	NA	-7	True	AATAAA	-23	NA	16644686	16618255	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_16619104_16619844_16620039_16625774_16626006_16626352_16626500_16627144_16627290_16628467_16628651_16630889_16631110_16631529_16631614_16632274_16632372_16632606_16632770_16633094_16633347_16635026_16635169_16643027_16643146_16644645
H1_mix_00006506	chr1	-	6744	2	ISM	ENSG00000280114.1	ENST00000624828.1	1351	5	-2009	2347	-2009	-2347	intron_retention	FALSE	canonical	2	2	junction_1	0	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTTGAAATCCAAGAATAAT	9428	False	NA	NA	False	AATAAA	-3	NA	16690758	16683443	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_16686756_16687326
H1_mix_00006508	chr1	-	836	1	FSM	ENSG00000238142.3	ENST00000684832.1	958	1	122	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGGTTTTATCATTTTAT	294	False	NA	-1	True	AATAAA	-31	NA	16889373	16888537	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16888500_16889400
H1_mix_00006510	chr1	-	544	6	FSM	ENSG00000117122.14	ENST00000476788.5	544	6	0	0	0	0	multi-exon	FALSE	canonical	3	4186	junction_5	323.215469926797	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGGTCTGCTTCTACAGG	2	True	NA	NA	False	NA	NA	NA	16980632	16975661	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16975731_16976500_16976546_16976707_16976924_16977108_16977199_16978236_16978315_16980586
H1_mix_00006511	chr1	-	2950	20	NNC	ENSG00000159363.19	novel	3996	29	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_14	114.826280930124	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGTGCCTGTCTTGTA	NA	False	NA	-9	True	AATAAA	-20	NA	17000311	16985957	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_16986359_16986462_16986633_16986804_16986957_16987045_16987270_16988137_16988235_16988321_16988475_16989690_16989771_16989886_16990004_16990126_16990288_16991733_16991859_16992008_16992130_16992242_16992403_16992485_16992582_16993628_16993836_16995990_16996165_16996253_16996301_16996385_16996497_16997019_16997176_17000010_17000143_17000245
H1_mix_00006512	chr1	-	3793	28	NIC	ENSG00000159363.19	novel	3981	29	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	113.456904310855	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGTGCCTGTCTTGTA	18	True	NA	-9	True	AATAAA	-20	NA	17011910	16985957	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_16986359_16986804_16986957_16987045_16987270_16988137_16988235_16988321_16988475_16989690_16989771_16989886_16990004_16990126_16990288_16991733_16991859_16992008_16992130_16992242_16992403_16992485_16992582_16993628_16993836_16995975_16996165_16996253_16996301_16996385_16996497_16997019_16997176_17000010_17000143_17000245_17000313_17000399_17000535_17002033_17002104_17002295_17002374_17004331_17004412_17004706_17004822_17005013_17005073_17005373_17005557_17005683_17005779_17011728
H1_mix_00006513	chr1	-	3955	29	NIC	ENSG00000159363.19	novel	3996	29	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_21	108.17160874636	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGTGCCTGTCTTGTA	14	True	NA	-9	True	AATAAA	-20	NA	17011914	16985957	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_16986359_16986462_16986633_16986804_16986957_16987045_16987270_16988137_16988235_16988321_16988475_16989690_16989771_16989886_16990004_16990126_16990288_16991733_16991859_16992008_16992130_16992242_16992403_16992485_16992582_16993628_16993836_16995975_16996165_16996253_16996301_16996385_16996497_16997019_16997176_17000010_17000143_17000245_17000313_17000399_17000508_17002033_17002104_17002295_17002374_17004331_17004412_17004691_17004822_17005013_17005073_17005373_17005557_17005683_17005779_17011728
H1_mix_00006519	chr1	-	550	4	FSM	ENSG00000117118.10	ENST00000475506.1	550	4	0	0	0	0	multi-exon	FALSE	canonical	3	734	junction_1	53.3062431198781	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATTTAGTGTATTCTGG	9265	False	NA	NA	False	NA	NA	NA	17044877	17027655	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_17027866_17028599_17028737_17033059_17033146_17044760
H1_mix_00006520	chr1	-	3185	16	NNC	ENSG00000159423.17	novel	3139	15	NA	NA	10	8	intron_retention	FALSE	canonical	2	5	junction_7	49.1419711991016	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGATGGTCTTTCTGGAGG	247	False	NA	0	True	AATAAA	-24	NA	18902518	18871421	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_18872958_18874462_18874582_18875381_18875504_18876314_18876468_18877207_18877256_18877415_18877613_18879299_18879374_18881418_18881494_18881699_18881888_18883123_18883199_18883278_18883429_18885472_18885629_18886463_18886512_18889361_18889455_18890011_18890106_18902461
H1_mix_00006522	chr1	-	3892	3	FSM	ENSG00000127463.16	ENST00000480380.1	3892	3	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_1	8.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAAAAAAATTAG	NA	False	NA	NA	False	NA	NA	NA	19221916	19216873	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_19219483_19219568_19219699_19220763
H1_mix_00006523	chr1	-	4084	22	FSM	ENSG00000127463.16	ENST00000375208.7	4084	22	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_20	67.1968712153608	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGCCCTGTGGTGAAAGAG	7	True	NA	36	True	NA	NA	NA	19251522	19218147	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_19219483_19219568_19219699_19220763_19220849_19222623_19222835_19223395_19223570_19227312_19227451_19230843_19230964_19231260_19231423_19232623_19232774_19232935_19233136_19235129_19235253_19237141_19237239_19238016_19238140_19238794_19238858_19239230_19239303_19239817_19239986_19240296_19240447_19241015_19241143_19242344_19242474_19243613_19243708_19244905_19245031_19251414
H1_mix_00006524	chr1	-	589	2	FSM	ENSG00000127463.16	ENST00000467423.2	589	2	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTTATCATAGAAATGGTG	1859	False	NA	NA	False	NA	NA	NA	19240568	19239668	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_19239986_19240296
H1_mix_00006525	chr1	-	1338	8	NNC	ENSG00000053371.13	novel	1360	7	NA	NA	0	7749	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	105.894055642459	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTGCAAAATAGATTAGG	16	True	NA	NA	False	NA	NA	NA	19312094	19296215	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_19296244_19303964_19304387_19306017_19306148_19307001_19307102_19307313_19307411_19308157_19308263_19308454_19308643_19311826
H1_mix_00006526	chr1	-	1700	10	NNC	ENSG00000077549.19	novel	1686	10	NA	NA	0	42559	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	580.51077977252	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTGCAAAATAGATTAGG	-9	True	NA	NA	False	NA	NA	NA	19485537	19296215	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_19296247_19338778_19339618_19344357_19344435_19345186_19345253_19356634_19356752_19357421_19357564_19378539_19378654_19385504_19385627_19419660_19419751_19485435
H1_mix_00006527	chr1	-	1706	10	NNC	ENSG00000077549.19	novel	1675	9	NA	NA	0	42559	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	580.51077977252	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTGCAAAATAGATTAGG	-9	True	NA	NA	False	NA	NA	NA	19485537	19296215	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_19296249_19338774_19339618_19344357_19344435_19345186_19345253_19356634_19356752_19357421_19357564_19378539_19378654_19385504_19385627_19419660_19419751_19485435
H1_mix_00006528	chr1	-	1171	6	FSM	ENSG00000053371.13	ENST00000330072.9	1171	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	112.555053196203	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTAGCCTAGGTCTTGA	16	True	NA	-39	True	AATAAA	-16	NA	19312094	19303998	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_19304387_19306017_19306148_19307001_19307102_19307313_19307411_19308454_19308643_19311826
H1_mix_00006530	chr1	-	849	5	FSM	ENSG00000188257.12	ENST00000400520.8	871	5	0	22	0	-15	multi-exon	FALSE	canonical	1	1	junction_4	3.41869858279434	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGCAATTAGCAAATCATG	4405	False	NA	-21	True	NA	NA	NA	19979607	19975452	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_19975844_19978014_19978122_19978379_19978525_19978733_19978912_19979579
H1_mix_00006531	chr1	-	849	5	FSM	ENSG00000188257.12	ENST00000482011.2	608	5	-21	-220	-18	-15	multi-exon	FALSE	canonical	2	4	junction_2	2.06155281280883	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGCAATTAGCAAATCATG	4373	False	NA	-21	True	NA	NA	NA	19979639	19975452	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_19975844_19978014_19978122_19978379_19978525_19978733_19978880_19979579
H1_mix_00006533	chr1	-	3817	13	NNC	ENSG00000127483.19	novel	6406	13	NA	NA	0	34372	intron_retention	FALSE	non_canonical	0	0	junction_1	164.543560595161	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACATCCTACTGAGGATT	0	True	NA	NA	False	NA	NA	NA	20787307	20705893	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_20705922_20742686_20745092_20745542_20745657_20747543_20747656_20749722_20749883_20757165_20757257_20765376_20765532_20767583_20767665_20770929_20771074_20773450_20773611_20776596_20776751_20779811_20779912_20787194
H1_mix_00006534	chr1	-	6415	14	NNC	ENSG00000127483.19	novel	6406	13	NA	NA	0	34372	intron_retention	FALSE	non_canonical	0	0	junction_1	201.089135053802	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACATCCTACTGAGGATT	0	True	NA	NA	False	NA	NA	NA	20787307	20705893	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_20705921_20742678_20745092_20745542_20745657_20747543_20747656_20749722_20749883_20757165_20757257_20765376_20765532_20767583_20767665_20770929_20771074_20773450_20776006_20776596_20776751_20779811_20779912_20780344_20780541_20787194
H1_mix_00006535	chr1	-	3797	12	NIC	ENSG00000127483.19	novel	6406	13	NA	NA	0	0	intron_retention	FALSE	canonical	1	172	junction_8	124.409946188976	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACCGTAGCTTATATT	0	True	NA	-21	True	AATAAA	-19	NA	20787307	20742678	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_20745092_20745542_20745657_20747543_20747656_20749722_20749883_20757165_20757257_20765376_20765532_20767583_20767665_20770929_20771074_20773450_20773611_20776596_20776751_20779811_20779912_20787194
H1_mix_00006536	chr1	-	4822	9	FSM	ENSG00000127483.19	ENST00000375003.6	4822	9	0	0	0	0	multi-exon	FALSE	canonical	1	172	junction_8	109.462036798152	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTGAACCGTAGCTTAT	5538	False	NA	-24	True	AATAAA	-16	NA	20775005	20742681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_20745092_20745542_20745657_20747543_20747656_20749722_20749883_20757165_20757257_20765376_20765532_20767583_20767665_20770929_20771074_20773450
H1_mix_00006537	chr1	-	3876	12	NNC	ENSG00000127483.19	novel	6406	13	NA	NA	11	0	intron_retention	FALSE	canonical	1	54	junction_4	160.957825182882	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTGAACCGTAGCTTAT	11	True	NA	-24	True	AATAAA	-16	NA	20787296	20742681	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_20745092_20745542_20745657_20747543_20747656_20749722_20749976_20757165_20757257_20765376_20765532_20767583_20767665_20770929_20771074_20773450_20773611_20776596_20776751_20779811_20779912_20787194
H1_mix_00006539	chr1	-	6480	36	NIC	ENSG00000075151.24	novel	6397	37	NA	NA	1	27	combination_of_known_junctions	FALSE	canonical	3	19	junction_31	71.2125075003668	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTGCATGTGTGCCCA	-17	True	NA	-4	True	AGTAAA	-19	NA	21176896	20806451	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_20807501_20810737_20810885_20813157_20813240_20817391_20817539_20825099_20825199_20827616_20827699_20829146_20829273_20840855_20841029_20849414_20849531_20851257_20851479_20853559_20853678_20854977_20855072_20857402_20857498_20860384_20860518_20862227_20862333_20864475_20864713_20865115_20865263_20879322_20879521_20886200_20886372_20892618_20892730_20893516_20893637_20895367_20895502_20899696_20899944_20904882_20904972_20941490_20942331_20950002_20950112_20969473_20969597_20973001_20973100_20980333_20980449_20981047_20981228_21001198_21001313_21002712_21002809_21050865_21050995_21089137_21089214_21176174_21176359_21176721
H1_mix_00006540	chr1	-	6113	33	NIC	ENSG00000075151.24	novel	5325	34	NA	NA	8	4	combination_of_known_splicesites	FALSE	canonical	2	14	junction_29	55.3138417916348	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGTGACTTCTCCTTTG	3	True	NA	-27	True	AATAAA	-27	NA	21176876	20806474	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_20807501_20810737_20810885_20813157_20813240_20817391_20817539_20825099_20825199_20827616_20827699_20829146_20829273_20840855_20841029_20849414_20849531_20851257_20851479_20853559_20853678_20854977_20855072_20857402_20857498_20860384_20860518_20862227_20862333_20864475_20864713_20865115_20865263_20879322_20879521_20886200_20886372_20893516_20893637_20895367_20895502_20899696_20899944_20904882_20904972_20941490_20942331_20950002_20950109_20969473_20969597_20973001_20973100_20980333_20980449_20981047_20981228_21050865_21050995_21089137_21089214_21176174_21176359_21176721
H1_mix_00006541	chr1	-	6400	32	NIC	ENSG00000075151.24	novel	6397	37	NA	NA	3	4	intron_retention	FALSE	canonical	2	3	junction_28	57.7848822086075	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGTGACTTCTCCTTTG	-2	True	NA	-27	True	AATAAA	-27	NA	21176881	20806474	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_20807501_20810737_20810885_20813157_20813240_20817391_20817539_20825099_20825199_20827616_20827699_20829146_20829273_20840855_20841029_20849414_20849531_20851257_20851479_20853559_20853678_20854977_20855072_20857402_20857498_20860384_20860518_20862227_20862333_20864475_20864713_20865115_20865263_20879322_20879521_20886200_20886372_20893516_20893637_20895367_20895502_20899696_20899944_20904882_20904972_20941490_20942331_20950002_20950112_20969473_20969597_20973001_20973100_20980333_20980449_21002712_21002809_21050865_21050995_21089137_21089214_21176174
H1_mix_00006542	chr1	-	6942	36	NIC	ENSG00000075151.24	novel	6064	35	NA	NA	0	4	intron_retention	FALSE	canonical	2	4	junction_24	82.4072713256964	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGTGACTTCTCCTTTG	-5	True	NA	-27	True	AATAAA	-27	NA	21176884	20806474	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_20807501_20810737_20810885_20813157_20813240_20817391_20817539_20825099_20825199_20827616_20827699_20829146_20829273_20840855_20841029_20849414_20849531_20851257_20851479_20853559_20853678_20854977_20855072_20857402_20857498_20860384_20860518_20862227_20862333_20864475_20864713_20865115_20865263_20879322_20879521_20886200_20886372_20892618_20892730_20893516_20893637_20895367_20895502_20899696_20899944_20904882_20904972_20941258_20941396_20941490_20942331_20950002_20950109_20969473_20969597_20973001_20973100_20980333_20980449_20981047_20981228_21001198_21001313_21002712_21002809_21050865_21050995_21089137_21089214_21176174
H1_mix_00006545	chr1	-	2268	5	NNC	ENSG00000227001.3	novel	661	5	NA	NA	-50	1518	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	12.051970793194	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGACTGTTGGATTGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	21428017	21423106	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_21424864_21425467_21425520_21426233_21426407_21427021_21427074_21427783
H1_mix_00006546	chr1	-	3276	25	FSM	ENSG00000076864.21	ENST00000495204.5	2489	25	0	-787	0	0	multi-exon	FALSE	canonical	3	23	junction_24	14.3313952178038	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGAGTTGGGCCTGGCTT	8	True	NA	-5	True	AATAAA	-21	NA	21651836	21596220	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_21597265_21597685_21597729_21597960_21598065_21598399_21598503_21599493_21599618_21601683_21601798_21602803_21602914_21606065_21606198_21608212_21608351_21608849_21608937_21609574_21609647_21610119_21610276_21611451_21611582_21611715_21611817_21612025_21612110_21613175_21613230_21613627_21613707_21613985_21614090_21617305_21617492_21617933_21617973_21619024_21619073_21620014_21620051_21626303_21626398_21649760_21649797_21651778
H1_mix_00006547	chr1	-	4298	25	FSM	ENSG00000076864.21	ENST00000611549.4	4294	25	0	-4	0	3	multi-exon	FALSE	canonical	3	5	junction_24	21.6493119598137	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTTGGGCCTGGCTTTGT	9872	False	NA	-2	True	AATAAA	-24	NA	21669300	21596217	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_21597265_21597685_21597729_21597960_21598096_21598399_21598503_21599493_21599618_21601683_21601798_21602803_21603913_21606065_21606198_21608212_21608351_21608849_21608937_21609574_21609647_21610119_21610276_21611451_21611582_21611715_21611817_21612025_21612110_21613175_21613230_21613627_21613707_21613985_21614090_21617305_21617492_21617933_21617973_21619024_21619073_21620014_21620051_21626303_21626398_21649760_21649797_21669253
H1_mix_00006548	chr1	-	4023	26	FSM	ENSG00000090686.16	ENST00000400301.5	4309	26	0	286	0	-286	multi-exon	FALSE	canonical	3	10	junction_4	57.9448013198768	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGACTGAAGTACATTTGG	6	True	NA	-20	True	AATAAA	-29	NA	21783195	21678583	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_21679440_21680807_21680835_21687190_21687240_21689973_21690100_21701497_21701603_21703511_21703619_21704261_21704393_21705726_21705838_21706125_21706188_21706466_21706590_21706743_21706869_21715388_21715458_21721035_21721167_21721649_21721765_21723897_21724096_21728569_21728720_21729703_21729833_21736445_21736626_21747066_21747150_21748137_21748272_21751506_21751616_21752526_21752652_21752991_21753120_21756545_21756703_21757662_21757784_21782823
H1_mix_00006552	chr1	-	7796	12	NNC	ENSG00000125944.21	novel	7751	11	NA	NA	0	47760	intron_retention	FALSE	non_canonical	0	0	junction_1	615.073401519037	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCCATGTTGCAGTATG	-13	True	NA	NA	False	NA	NA	NA	23344295	23256010	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_23256051_23304693_23311067_23311200_23311323_23313552_23313703_23318482_23318689_23321527_23321664_23323555_23323733_23333517_23333632_23337753_23337862_23338489_23338609_23340851_23341018_23344210
H1_mix_00006553	chr1	-	2294	9	NIC	ENSG00000125944.21	novel	2694	11	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	139	junction_5	567.982999305437	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCTATTTCAAATTCAAT	14	True	NA	-19	True	AATAAA	-23	NA	23344268	23309785	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_23311067_23311200_23311323_23313552_23313703_23318482_23318689_23321527_23321664_23333517_23333632_23337753_23337862_23338489_23338609_23344210
H1_mix_00006554	chr1	-	2485	10	NIC	ENSG00000125944.21	novel	2694	11	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	139	junction_5	646.629036705831	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCTATTTCAAATTCAAT	-8	True	NA	-19	True	AATAAA	-23	NA	23344290	23309785	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_23311067_23311200_23311323_23313552_23313703_23318482_23318689_23321527_23321664_23333517_23333632_23337753_23337862_23338489_23338609_23340851_23341021_23344210
H1_mix_00006555	chr1	-	2487	10	NIC	ENSG00000125944.21	novel	2694	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	139	junction_5	626.408634820576	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCTATTTCAAATTCAAT	-13	True	NA	-19	True	AATAAA	-23	NA	23344295	23309785	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_23311067_23311200_23311323_23313552_23313703_23318482_23318689_23321527_23321664_23333517_23333632_23337753_23337862_23338489_23338609_23340851_23341018_23344210
H1_mix_00006560	chr1	-	4471	4	FSM	ENSG00000125945.15	ENST00000314011.9	4465	4	0	-6	0	6	multi-exon	FALSE	canonical	1	1	junction_3	7.78888096369861	320	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGAATTATTTTAGTAAC	-6	True	NA	4	True	ATTAAA	-26	NA	23369836	23359441	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_23363222_23367041_23367169_23367972_23368066_23369365
H1_mix_00006562	chr1	-	1584	10	NNC	ENSG00000117305.15	novel	1570	9	NA	NA	0	43623	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	79.6743371481684	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATTGGAA	15	True	NA	NA	False	NA	NA	NA	23825416	23758261	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_23758292_23801887_23802565_23804399_23804526_23808134_23808324_23810735_23810800_23814189_23814339_23816674_23816771_23817475_23817584_23820509_23820594_23825355
H1_mix_00006563	chr1	-	1269	9	NIC	ENSG00000117308.15	novel	1516	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	139.219251542306	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGTTCTCACAGATGGTC	1339	False	NA	-6	True	AATAAA	-22	NA	23799436	23795598	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_23796008_23796150_23796266_23796696_23796783_23796875_23796943_23797033_23797148_23797694_23797872_23798116_23798231_23798614_23798731_23799365
H1_mix_00006564	chr1	-	1801	10	FSM	ENSG00000117308.15	ENST00000481736.5	1801	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	102.594611559222	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGTTCTCACAGATGGTC	-6	True	NA	-6	True	AATAAA	-22	NA	23800781	23795598	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_23796008_23796150_23796266_23796508_23796587_23796696_23796783_23796875_23796943_23797033_23797148_23797694_23797872_23798116_23798731_23799365_23799437_23800711
H1_mix_00006566	chr1	-	1346	10	NIC	ENSG00000117308.15	novel	1488	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	102.571143632958	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGGTTCTCACAGATGGT	1339	False	NA	-7	True	AATAAA	-21	NA	23799436	23795599	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_23796008_23796150_23796266_23796508_23796587_23796696_23796783_23796875_23796943_23797033_23797148_23797694_23797872_23798116_23798231_23798614_23798731_23799365
H1_mix_00006573	chr1	-	2031	6	FSM	ENSG00000117305.15	ENST00000513148.1	2011	6	0	-20	0	20	multi-exon	FALSE	canonical	3	201	junction_1	28.3224292743402	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACTCCATCTAAAAAAAAAAA	15	True	NA	NA	False	NA	NA	NA	23825416	23809266	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_23810800_23814189_23814339_23816674_23816771_23817475_23817584_23820509_23820594_23825355
H1_mix_00006575	chr1	-	2895	7	NNC	ENSG00000188529.15	novel	7656	6	NA	NA	0	33961	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	625.904612008358	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGTATGGTGGCTCAAGC	90	False	NA	NA	False	AAAAAG	-1	NA	23980271	23930385	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_23930414_23969079_23971440_23971572_23971627_23971849_23972013_23974973_23975076_23978710_23978818_23980190
H1_mix_00006578	chr1	-	1390	5	FSM	ENSG00000188529.15	ENST00000495785.1	1390	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	699.780144045257	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCTGCATCTCACACCAAA	90	False	NA	-78	True	AAGAAA	-26	NA	23980271	23971338	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_23972013_23974973_23975081_23977910_23978274_23978652_23978818_23980190
H1_mix_00006582	chr1	-	784	3	FSM	ENSG00000001460.18	ENST00000435187.1	772	3	0	-12	0	12	multi-exon	FALSE	canonical	3	86	junction_1	4.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGGTGTTTTAACAGTC	NA	False	NA	NA	False	AATAAA	-14	NA	24391679	24379260	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_24379824_24383901_24384004_24391560
H1_mix_00006583	chr1	-	1573	5	FSM	ENSG00000117616.18	ENST00000243189.12	1425	5	8	-156	0	156	multi-exon	FALSE	canonical	2	16	junction_2	40.7208484685671	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGCTGAATTAGAAACTGAA	8	True	NA	NA	False	NA	NA	NA	25247446	25242092	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_25242706_25243549_25243634_25245149_25245302_25246443_25247030_25247308
H1_mix_00006585	chr1	-	1504	7	NIC	ENSG00000117616.18	novel	3034	6	NA	NA	6	0	intron_retention	FALSE	canonical	0	0	junction_2	47.9319540830772	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTATTGTATATATATA	48	False	NA	-19	True	AATAAA	-20	NA	25247440	25242248	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_25242706_25243549_25243634_25244176_25244225_25244453_25244499_25245149_25245302_25246443_25247030_25247308
H1_mix_00006586	chr1	-	1458	6	NIC	ENSG00000117616.18	novel	1425	5	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_2	45.017329996347	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTATTGTATATATATA	46	False	NA	-19	True	AATAAA	-20	NA	25247442	25242248	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_25242706_25243549_25243634_25244453_25244499_25245149_25245302_25246443_25247030_25247308
H1_mix_00006589	chr1	-	1933	6	NIC	ENSG00000117616.18	novel	3034	6	NA	NA	3	-3	intron_retention	FALSE	canonical	3	6	junction_2	43.116586135732	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTGTATATAGTTGTAAA	45	False	NA	-136	True	NA	NA	NA	25247443	25242365	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_25242706_25243549_25244225_25244453_25244499_25245149_25245302_25246443_25247030_25247308
H1_mix_00006594	chr1	-	1137	5	FSM	ENSG00000117632.23	ENST00000357865.6	1137	5	0	0	0	0	multi-exon	FALSE	canonical	2	54	junction_4	1660.96212705167	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTTAATAAAACTGCACAG	9712	False	NA	-42	True	NA	NA	NA	25906991	25900594	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_25901088_25901490_25901683_25903640_25903814_25904663_25904739_25906787
H1_mix_00006595	chr1	-	2523	11	FSM	ENSG00000158006.14	ENST00000374284.5	2523	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_10	14.4737693777399	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGCCACTCCCAGAGAGG	26	True	NA	NA	False	AATAAA	-18	NA	25998044	25960769	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_25962084_25972557_25972713_25974479_25974651_25976681_25976774_25982363_25982478_25983945_25984088_25984459_25984529_25988230_25988328_25989447_25989602_25990726_25990922_25998024
H1_mix_00006597	chr1	-	2254	11	FSM	ENSG00000158062.21	ENST00000314675.11	2254	11	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_7	67.3175311490254	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGGTAAGGAATGTTGCC	0	True	NA	NA	False	GGGGCT	-26	NA	26306636	26281327	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26284483_26285463_26285542_26285822_26286038_26300925_26301025_26301693_26301723_26302812_26302919_26306591
H1_mix_00006598	chr1	-	1795	16	FSM	ENSG00000158062.21	ENST00000374221.7	1792	16	0	-3	0	0	multi-exon	FALSE	canonical	3	6	junction_15	63.9279455498315	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGCTCCGCCAGGCTCT	-9	True	NA	NA	False	AATAAA	-18	NA	26306645	26282280	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26284483_26285463_26285542_26285822_26286038_26294204_26294332_26296918_26296996_26297426_26297482_26297961_26298063_26300925_26301025_26301693_26301723_26302812_26302919_26303042_26303168_26306591
H1_mix_00006602	chr1	-	1148	8	ISM	ENSG00000176092.17	ENST00000308182.10	5239	20	17651	12	-96	0	3prime_fragment	FALSE	canonical	3	35	junction_7	33.9987994986138	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCAGGTACCCTTGTC	NA	False	NA	-20	True	NA	NA	NA	26336479	26321876	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_26322057_26322163_26322324_26324151_26324311_26328208_26328333_26328733_26328874_26331488_26331619_26336094_26336208_26336337
H1_mix_00006603	chr1	-	1088	1	FSM	ENSG00000260063.1	ENST00000569378.1	2000	1	857	55	857	-55	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCAAACTTGGTTGGCAC	4910	False	NA	NA	False	NA	NA	NA	26693274	26692186	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_26692200_26693300
H1_mix_00006612	chr1	-	1159	9	FSM	ENSG00000117748.10	ENST00000373909.7	1162	9	3	0	3	0	multi-exon	FALSE	canonical	3	8	junction_8	264.802491255275	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTACAAATAAGCTTGTTAC	-10	True	NA	NA	False	NA	NA	NA	27914743	27891923	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_27892248_27894011_27894107_27894289_27894398_27897004_27897122_27897632_27897708_27906927_27907042_27907180_27907283_27914062_27914170_27914626
H1_mix_00006614	chr1	-	1720	17	FSM	ENSG00000158161.16	ENST00000373863.3	1729	17	0	9	0	-9	multi-exon	FALSE	canonical	0	0	junction_1	21.542019258881	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGGTAATCAGTTGGCAT	7873	False	NA	NA	False	AATAAA	-7	NA	28088564	27977281	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_27977390_27978373_27978475_27988534_27988657_27989696_27989812_27993399_27993561_27997319_27997379_27999959_28000050_28004335_28004420_28010946_28011087_28013110_28013295_28017153_28017240_28035543_28035681_28038838_28038906_28042570_28042651_28048382_28048427_28057993_28058095_28088523
H1_mix_00006615	chr1	-	1586	15	ISM	ENSG00000158161.16	ENST00000373863.3	1729	17	-13	11200	-13	0	5prime_fragment	FALSE	canonical	3	52	junction_6	11.7388679355449	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATTATTTTCTAGCCCCT	33	True	NA	-13	True	AATAAA	-20	NA	28088577	27988472	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_27988657_27989696_27989812_27993399_27993561_27997319_27997379_27999959_28000050_28004335_28004420_28010946_28011087_28013110_28013295_28017153_28017240_28035543_28035681_28038838_28038906_28042570_28042651_28048382_28048427_28057993_28058095_28088523
H1_mix_00006616	chr1	-	1495	10	NNC	ENSG00000126698.11	novel	1600	10	NA	NA	0	31828	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	867.026079320698	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGTTCTTTTGAATATA	21	True	NA	NA	False	NA	NA	NA	28233004	28167627	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_28167664_28200556_28201371_28203746_28203823_28205257_28205350_28208341_28208414_28209971_28210067_28210570_28210638_28214939_28214997_28228921_28229024_28232920
H1_mix_00006618	chr1	-	1787	10	NNC	ENSG00000126698.11	novel	1600	10	NA	NA	0	31828	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	867.026079320698	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGTTCTTTTGAATATA	5	True	NA	NA	False	NA	NA	NA	28233020	28167627	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_28167665_28200281_28201371_28203746_28203823_28205257_28205350_28208341_28208414_28209971_28210067_28210570_28210638_28214939_28214997_28228921_28229024_28232920
H1_mix_00006624	chr1	-	1654	4	FSM	ENSG00000197989.15	ENST00000461448.6	1644	4	-10	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	23.8932812499432	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTTTGTATTTTTT	2	True	NA	NA	False	AATAAA	-28	NA	28581867	28578537	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_28578681_28579532_28580647_28581110_28581230_28581589
H1_mix_00006625	chr1	-	816	5	ISM	ENSG00000120656.14	ENST00000471683.6	1220	7	25085	28	-2425	-28	3prime_fragment	FALSE	canonical	1	1	junction_1	230.295869480979	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCATGATCACAGTCTTTG	NA	False	NA	NA	False	NA	NA	NA	28618030	28589350	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_28589775_28590276_28590387_28605371_28605461_28613246_28613362_28617952
H1_mix_00006626	chr1	-	1192	7	FSM	ENSG00000120656.14	ENST00000495422.2	1438	7	0	246	0	0	multi-exon	FALSE	canonical	2	3	junction_6	234.626417002765	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGGGTACCTTTGAAATC	5185	False	28643102	-3	True	AATAAA	-18	NA	28643085	28603095	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_28603575_28605371_28605461_28613246_28613362_28617952_28618031_28621913_28622166_28623945_28624031_28642991
H1_mix_00006627	chr1	-	495	1	Genic_Genomic	ENSG00000253304.2	novel	NA	NA	NA	NA	-258	-2831	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCGGGGGTGGGGTCGAG	7923	False	NA	NA	False	NA	NA	NA	29122759	29122264	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_-_29122300_29122800
H1_mix_00006637	chr1	-	5280	22	NNC	ENSG00000134644.16	novel	3936	22	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	112	junction_19	145.915003370513	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTGTGCTTTATTTTA	4	True	NA	-4	True	AATACA	-14	NA	31065695	30931507	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_30933343_30936642_30936836_30941150_30941273_30941997_30942124_30945345_30945484_30950126_30950262_30952233_30952364_30953713_30953982_30964673_30964911_30965981_30966198_30967166_30967311_30968353_30968493_30974650_30974803_30980061_30980167_30981311_30981406_30992389_30992661_30995053_30995221_31005852_31006032_31006993_31007100_31028795_31028865_31059203_31059578_31065615
H1_mix_00006643	chr1	-	3296	2	FSM	ENSG00000229447.2_ENSG00000060688.13	ENST00000486941.1	743	2	-2096	-457	-237	352	multi-exon	FALSE	canonical	3	1624	junction_1	0	396	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCACTTGAACCTGGGAGG	5307	False	NA	NA	False	NA	NA	NA	31263918	31259215	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_31260122_31261528
H1_mix_00006644	chr1	-	1851	4	FSM	ENSG00000060688.13	ENST00000373720.3	1087	4	-270	-494	-270	352	multi-exon	FALSE	canonical	3	1430	junction_2	85.2655981168385	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCACTTGAACCTGGGAGG	NA	False	NA	NA	False	NA	NA	NA	31269936	31259215	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_31260122_31261528_31261633_31267870_31267933_31269157
H1_mix_00006647	chr1	-	732	4	FSM	ENSG00000162517.13	ENST00000461006.5	732	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	134.725234788769	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCAGGAGCAGGTCCTTG	9913	False	NA	NA	False	NA	NA	NA	31635260	31630339	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_31630733_31632494_31632639_31633158_31633315_31635221
H1_mix_00006648	chr1	-	750	4	FSM	ENSG00000162517.13	ENST00000478502.5	750	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	131.362940825113	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAAATAGTGAGGACCGG	277	False	NA	NA	False	NA	NA	NA	31644896	31630448	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_31630843_31632494_31632639_31633158_31633315_31644840
H1_mix_00006649	chr1	-	5180	71	FSM	ENSG00000084636.18	ENST00000373672.8	5418	71	0	238	0	10	multi-exon	TRUE	canonical	2	6	junction_63	12.9182989971432	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCCCTTTCCCTTCCAG	-5	True	NA	67	True	AATAAA	-12	NA	31704017	31652500	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_31652854_31653598_31653677_31653866_31654044_31654791_31654859_31655313_31655503_31656399_31656445_31657032_31657069_31658487_31658578_31658913_31658965_31660584_31660639_31661065_31661120_31661413_31661459_31661659_31661705_31662333_31662388_31662586_31662659_31665171_31665235_31665582_31665619_31665881_31665936_31666036_31666082_31667574_31667629_31668164_31668219_31668801_31668856_31670601_31670647_31671614_31671660_31672415_31672503_31672595_31672638_31672723_31672841_31675006_31675040_31675257_31675312_31679631_31679686_31679803_31679852_31680041_31680102_31680904_31680932_31681022_31681068_31682933_31683003_31683193_31683248_31683333_31683370_31683706_31683749_31683949_31684004_31684108_31684232_31684522_31684631_31684820_31684857_31685638_31685771_31686090_31686136_31686243_31686280_31688466_31688503_31688860_31688972_31689049_31689086_31689740_31689852_31690366_31690394_31690528_31690574_31691187_31691227_31691416_31691513_31691597_31691643_31692004_31692068_31692473_31692510_31692597_31692643_31692766_31692809_31693091_31693155_31694143_31694171_31695185_31695222_31695760_31695788_31696087_31696142_31696962_31697089_31697219_31697301_31697905_31698173_31698482_31698607_31699812_31699931_31700040_31700116_31702120_31702228_31703836
H1_mix_00006651	chr1	-	4857	29	FSM	ENSG00000121753.13	ENST00000398547.5	4857	29	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_26	24.7566472211536	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGCTGAGCTGTTTG	660	False	NA	-11	True	AATAAA	-15	NA	31763922	31727116	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_31727606_31728181_31728281_31728597_31728634_31730799_31731420_31732114_31732155_31732516_31732613_31732971_31733144_31735182_31735282_31735579_31735666_31735826_31735894_31736320_31736391_31736572_31736724_31737428_31737532_31737651_31737756_31738199_31738327_31738586_31738631_31738831_31738938_31739307_31739636_31739925_31740035_31740109_31740179_31740346_31740542_31741372_31741480_31741623_31741726_31741799_31741968_31742052_31742218_31742837_31743003_31744647_31744732_31755998_31756816_31763883
H1_mix_00006652	chr1	-	5188	28	FSM	ENSG00000121753.13	ENST00000398542.5	5176	28	0	-12	0	12	multi-exon	FALSE	canonical	1	20	junction_11	19.6927009101292	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGCTTCCCTCAGGT	14	True	NA	1	True	AATAAA	-27	NA	31764340	31727104	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_31727606_31728181_31728281_31728597_31728634_31730799_31731420_31732114_31732155_31732516_31732613_31732971_31733144_31735579_31735666_31735826_31735894_31736320_31736391_31736572_31736724_31737428_31737532_31737651_31737756_31738199_31738327_31738586_31738631_31738831_31738938_31739307_31739636_31739925_31740035_31740109_31740179_31740346_31740542_31741372_31741480_31741623_31741726_31741799_31741968_31742052_31742218_31744192_31744358_31744647_31744732_31755998_31756816_31763883
H1_mix_00006653	chr1	-	2949	10	FSM	ENSG00000121753.13	ENST00000465256.5	2936	10	0	-13	0	12	multi-exon	FALSE	canonical	3	17	junction_7	22.1760631713065	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGCTTCCCTCAGGT	8009	False	NA	1	True	AATAAA	-27	NA	31736679	31727104	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_31728082_31728181_31728281_31728597_31728634_31730799_31731420_31732114_31732155_31732516_31732613_31732971_31733144_31735182_31735666_31735826_31735894_31736320
H1_mix_00006654	chr1	-	4337	28	NIC	ENSG00000121753.13	novel	5708	33	NA	NA	-125	-12	combination_of_known_junctions	FALSE	canonical	1	20	junction_12	17.9881838979128	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACTCTGTGGATTTTGCT	8193	False	NA	-24	True	AATAAA	-2	NA	31756389	31727129	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_31727606_31728024_31728082_31728181_31728281_31728597_31728634_31730799_31731420_31732114_31732155_31732516_31732613_31732971_31733144_31735579_31735666_31735826_31735894_31736320_31736391_31736572_31736724_31737428_31737532_31737651_31737756_31738199_31738327_31738586_31738631_31738831_31738938_31739307_31739636_31739925_31740035_31740109_31740179_31740346_31740542_31741372_31741480_31741623_31741726_31741799_31741968_31742052_31742218_31744192_31744358_31744647_31744732_31755998
H1_mix_00006657	chr1	-	3875	8	NNC	ENSG00000184007.22	novel	3910	6	NA	NA	0	2799	intron_retention	TRUE	non_canonical	0	0	junction_1	887.621862860853	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATCACCCCGATCGATGGT	-29	True	NA	NA	False	NA	NA	NA	31938368	31903621	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_31903650_31906425_31908112_31908169_31908961_31910037_31910113_31911695_31911827_31915894_31915988_31918969_31919659_31937986
H1_mix_00006658	chr1	-	1032	4	FSM	ENSG00000184007.22	ENST00000457805.6	1032	4	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_3	877.709265962002	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCTCTAAGGAAAACCAGC	237	False	NA	93	True	TTTAAA	-14	NA	31919368	31908533	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_31908961_31910037_31910113_31911695_31911827_31918969
H1_mix_00006664	chr1	-	1539	11	FSM	ENSG00000160055.20	ENST00000491434.5	1538	11	0	-1	0	1	multi-exon	FALSE	canonical	3	6	junction_2	19.7050754883101	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCTGTGCCAAATATACC	12	True	NA	-48	True	AATATA	-14	NA	32222333	32214475	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32215050_32215135_32215217_32215672_32215796_32216193_32216282_32216383_32216518_32216888_32216948_32217258_32217352_32217436_32217578_32221130_32221198_32221866_32222019_32222306
H1_mix_00006669	chr1	-	1590	3	NNC	ENSG00000175130.7	novel	1546	2	NA	NA	0	53411	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	8036	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAGAAAAGAGCTGGGG	-1	True	NA	NA	False	AAAAAG	-16	NA	32336233	32280427	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_32280472_32333838_32335098_32335946
H1_mix_00006670	chr1	-	570	3	FSM	ENSG00000160058.19	ENST00000530876.5	570	3	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	36.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACTGCGATGTCATCACCC	3	True	NA	NA	False	NA	NA	NA	32394431	32383896	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32383998_32386778_32386896_32394079
H1_mix_00006671	chr1	-	571	3	FSM	ENSG00000160058.19	ENST00000530753.1	571	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	136.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTGATCTCAGACACCTT	9	True	NA	NA	False	AAGAAA	-19	NA	32394425	32383940	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32384049_32386778_32386896_32394079
H1_mix_00006672	chr1	-	504	7	NNC	ENSG00000176261.16	novel	1567	7	NA	NA	0	1949	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	366.306641429767	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGAAAGCTAATACAGTC	703	False	NA	NA	False	NA	NA	NA	32650525	32598222	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_32598251_32621832_32621949_32627507_32627545_32633644_32633728_32633950_32634073_32634767_32634793_32650432
H1_mix_00006675	chr1	-	502	5	NIC	ENSG00000176261.16	novel	620	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_4	415.877611203104	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTTGTTTTCCTCTTC	7	True	NA	-20	True	AATAAA	-17	NA	32650535	32621829	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_32621949_32627507_32627545_32633644_32633728_32633950_32634111_32650432
H1_mix_00006679	chr1	-	2248	12	FSM	ENSG00000134684.12	ENST00000675785.1	2248	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_11	340.375825345072	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTCCATAAGGCATCTCA	-30	True	NA	-103	True	AATGAA	-39	NA	32817380	32775308	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32776092_32779381_32779524_32780084_32780279_32781047_32781146_32782403_32782540_32786361_32786448_32786939_32787076_32791161_32791255_32797762_32797844_32806481_32806612_32810590_32810767_32817187
H1_mix_00006681	chr1	-	2556	9	FSM	ENSG00000116514.17	ENST00000373456.11	2560	9	0	4	0	0	multi-exon	FALSE	canonical	3	9	junction_7	22.293496809608	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACCTCATTTTCCTTGGC	238	False	NA	-4	True	AATAAA	-20	NA	32964685	32936448	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32937260_32938396_32938529_32942251_32942460_32944018_32944160_32945513_32945629_32946401_32946565_32948221_32948367_32949568_32949775_32964050
H1_mix_00006686	chr1	-	2799	8	ISM	ENSG00000134686.20	ENST00000373422.8	4255	14	75437	3	-306	0	3prime_fragment	FALSE	canonical	1	2	junction_7	49.6608908662808	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGGTGCCTTTCTCC	NA	False	NA	-7	True	AATAAA	-14	NA	33355209	33323625	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_33325020_33328869_33329147_33330070_33330213_33331347_33331463_33332274_33332405_33334089_33334293_33354400_33354567_33354837
H1_mix_00006690	chr1	-	4133	24	FSM	ENSG00000121904.19	ENST00000373380.5	4379	24	246	0	246	0	multi-exon	FALSE	canonical	1	1	junction_1	5.6601949775043	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATTAGC	NA	False	NA	NA	False	NA	NA	NA	33709258	33591806	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_33592490_33600864_33601011_33602368_33602547_33605281_33605471_33611040_33611251_33614503_33614621_33616905_33616976_33617498_33617618_33622166_33622272_33623369_33623467_33624518_33624644_33625050_33625255_33626485_33626582_33633421_33633536_33635213_33635331_33636359_33636555_33646647_33646836_33652322_33652462_33657945_33658138_33662889_33663093_33692929_33693057_33698752_33698945_33700516_33700674_33709088
H1_mix_00006691	chr1	-	3151	13	FSM	ENSG00000121904.19	ENST00000373377.1	3212	13	3	58	3	-58	multi-exon	FALSE	canonical	0	0	junction_1	6.89806736219163	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCCAAGATCACGCCATT	NA	False	NA	NA	False	NA	NA	NA	33626581	33598746	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_33600242_33600864_33601011_33602368_33602547_33605281_33605471_33611040_33611251_33614503_33614621_33616905_33616976_33617498_33617618_33622166_33622272_33623369_33623467_33624518_33624644_33625050_33625255_33626485
H1_mix_00006696	chr1	-	3102	11	NNC	ENSG00000116560.11	novel	3740	10	NA	NA	0	59542	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	596.234651794073	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAGGCCTAGATATATAT	-1	True	NA	NA	False	NA	NA	NA	35193145	35116835	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_35116862_35183599_35184594_35187000_35187123_35187202_35187252_35187972_35188091_35189002_35189088_35189185_35189383_35190497_35190594_35190693_35190996_35191340_35191530_35192221
H1_mix_00006697	chr1	-	8889	13	NNC	ENSG00000116560.11	novel	3740	10	NA	NA	0	59542	intron_retention	FALSE	non_canonical	0	0	junction_1	719.418104944699	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAGGCCTAGATATATAT	-1	True	NA	NA	False	NA	NA	NA	35193145	35116835	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_35116862_35176379_35176475_35177318_35177400_35177988_35184594_35187000_35187123_35187202_35187252_35187972_35188091_35189002_35189088_35189185_35189383_35190497_35190594_35190693_35190996_35191340_35191530_35192221
H1_mix_00006702	chr1	-	464	6	FSM	ENSG00000116560.11	ENST00000460428.5	464	6	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_3	868.822559559776	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTTTTGTTTTTGTTT	5102	False	NA	-14	True	AATAAA	-19	NA	35188042	35176377	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_35176472_35177318_35177400_35177988_35178037_35187000_35187123_35187202_35187252_35187972
H1_mix_00006704	chr1	-	806	3	FSM	ENSG00000239636.2	ENST00000444348.2	902	3	42	54	42	-48	multi-exon	FALSE	canonical	2	2	junction_2	1	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGCAGGAACTCAATGAAT	32	False	NA	NA	False	ATTAAA	-39	NA	35577729	35569860	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_35569920_35574359_35574699_35577321
H1_mix_00006706	chr1	-	1626	8	NNC	ENSG00000092853.14	novel	3977	24	NA	NA	3	-13373	at_least_one_novel_splicesite	FALSE	canonical	2	23	junction_7	46.1669552288435	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTACATTGTGGGGAGC	53	False	NA	NA	False	NA	NA	NA	35769925	35760337	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_35760917_35761095_35761205_35761997_35762071_35762403_35762482_35763159_35763322_35764265_35764715_35765217_35765327_35769858
H1_mix_00006707	chr1	-	4303	2	FSM	ENSG00000171812.13	ENST00000303143.9	4447	2	142	2	142	-2	multi-exon	FALSE	canonical	3	10	junction_1	0	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGCACTGTGCTGAAACT	113	False	NA	NA	False	AATAAA	-14	NA	36100107	36095242	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_36099488_36100049
H1_mix_00006708	chr1	-	2036	2	FSM	ENSG00000171812.13	ENST00000481785.1	2036	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACAAAGAACCTCCTGGAA	NA	False	NA	NA	False	NA	NA	NA	36100249	36097506	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_36099488_36100194
H1_mix_00006709	chr1	-	2428	3	FSM	ENSG00000054116.12	ENST00000462715.1	2428	3	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_1	24.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCCAATCATGTCCTGT	9927	False	NA	-9	True	AATAAA	-17	NA	36140998	36136580	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_36137979_36139719_36139820_36140068
H1_mix_00006710	chr1	-	1518	5	FSM	ENSG00000054116.12	ENST00000373162.5	1056	5	11	-473	0	0	multi-exon	FALSE	canonical	3	36	junction_4	190.810115035865	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCCAATCATGTCCTGT	0	True	NA	-9	True	AATAAA	-17	NA	36149486	36136580	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_36137323_36137795_36137979_36139719_36139820_36140068_36140167_36149091
H1_mix_00006713	chr1	-	929	9	NNC	ENSG00000116898.12	novel	953	8	NA	NA	0	46754	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	539.631804450961	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAAATTCAAGGCTCCTG	-18	True	NA	NA	False	NA	NA	NA	36464384	36408963	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_36408996_36455773_36455926_36456186_36456379_36457922_36457982_36460691_36460777_36461263_36461313_36462087_36462164_36463805_36463851_36464145
H1_mix_00006714	chr1	-	2756	5	NNC	ENSG00000163873.10	novel	2955	15	NA	NA	31596	1483	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	15.6744218394172	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCATTTCACTGCTTGATT	NA	False	NA	NA	False	NA	NA	NA	36822091	36803134	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_36805238_36806103_36806327_36817059_36817278_36819735_36819855_36821998
H1_mix_00006715	chr1	-	1407	3	FSM	ENSG00000233621.3	ENST00000424989.2	1419	3	8	4	8	-1	multi-exon	FALSE	canonical	2	6	junction_1	0	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTTATTTTTCTCTGCT	-33	True	NA	-3	True	AATAAA	-16	NA	37474424	37454879	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_37455913_37456366_37456460_37474143
H1_mix_00006717	chr1	-	2623	1	FSM	ENSG00000116922.15	ENST00000609516.1	2622	1	0	-1	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGTGTCAAGTCTTATG	8060	False	NA	-1	True	AATAAA	-13	NA	37684192	37681569	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_37681600_37684200
H1_mix_00006720	chr1	-	2355	5	FSM	ENSG00000116922.15	ENST00000358011.8	2355	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	110.005681671448	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGTGTCAAGTCTTATG	-5	True	NA	-1	True	AATAAA	-13	NA	37690520	37681569	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_37683161_37683318_37683438_37686272_37686453_37689605_37689884_37690333
H1_mix_00006724	chr1	-	7935	11	FSM	ENSG00000188786.10	ENST00000373036.5	7937	11	2	0	2	0	multi-exon	FALSE	canonical	2	6	junction_1	3.02654919008431	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTAGTATCTGTGGCAT	6	True	NA	-6	True	ATTAAA	-35	NA	37859590	37809573	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_37815567_37817418_37817483_37822120_37822717_37823709_37823813_37832244_37832323_37835078_37835216_37835670_37835745_37838624_37838757_37839919_37840159_37857250_37857710_37859530
H1_mix_00006725	chr1	-	793	4	FSM	ENSG00000183431.12	ENST00000460925.1	793	4	0	0	0	0	multi-exon	FALSE	canonical	3	1407	junction_3	57.1722543430523	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGGGCCCAAAGCCTTCCA	NA	False	NA	NA	False	NA	NA	NA	37979199	37969386	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_37969465_37969570_37969736_37976883_37976954_37978719
H1_mix_00006729	chr1	-	2102	16	FSM	ENSG00000090621.15	ENST00000678625.1	2082	16	0	-20	0	0	multi-exon	FALSE	canonical	3	64	junction_7	150.36039667708	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAAAATCTCCATAAA	22	True	NA	-31	True	NA	NA	NA	39575786	39560836	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563613_39563742_39563835_39563923_39564422_39564543_39564700_39564774_39565105_39565379_39567750_39567847_39568801_39568940_39569594_39569690_39569862_39570003_39571233_39571350_39572392_39572587_39575758
H1_mix_00006730	chr1	-	3498	14	FSM	ENSG00000090621.15	ENST00000677244.1	3478	14	0	-20	0	0	multi-exon	FALSE	canonical	3	184	junction_4	126.220104551135	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAAAATCTCCATAAA	982	False	NA	-31	True	NA	NA	NA	39575924	39560836	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39563923_39564470_39564543_39564685_39564774_39565105_39565379_39567750_39567847_39568801_39568940_39569594_39569690_39569862_39570003_39571233_39571350_39572392_39572587_39575758
H1_mix_00006731	chr1	-	4077	5	FSM	ENSG00000163909.8	ENST00000372852.4	4077	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	6.53834841531101	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGAAGGTGAGATATCTT	-3	True	NA	-3	True	AATAAA	-20	NA	39639643	39623434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_39627181_39630226_39630309_39631495_39631580_39632648_39632716_39639545
H1_mix_00006732	chr1	-	2088	11	NNC	ENSG00000043514.17	novel	5051	11	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	3	92	junction_8	26.615784790233	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTTTGATCCTTAAAAAGA	20	False	NA	-25	True	AATAAA	-19	NA	39883480	39841048	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_39841914_39844100_39844219_39844530_39844641_39847219_39847298_39847547_39847661_39847985_39848098_39850118_39850262_39852730_39852877_39853969_39854067_39857274_39857418_39883317
H1_mix_00006734	chr1	-	1949	10	NIC	ENSG00000043514.17	novel	5051	11	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	60.1315430463563	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCTCTTTGATCCTTAAA	9	True	NA	-29	True	AATAAA	-15	NA	39883491	39841052	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_39841914_39844100_39844219_39844530_39844641_39847219_39847298_39847547_39847661_39847985_39848098_39850118_39850262_39853969_39854069_39857276_39857418_39883317
H1_mix_00006738	chr1	-	2490	8	FSM	ENSG00000131238.18	ENST00000641236.1	2481	8	0	-9	0	0	multi-exon	FALSE	canonical	3	1582	junction_2	92.2983184670053	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGAGTAGTTTCTTATCC	-3	True	NA	-34	True	NA	NA	NA	40097250	40072728	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_40074184_40076841_40076914_40078559_40078659_40080396_40080488_40089409_40089513_40091328_40091400_40092044_40092508_40097114
H1_mix_00006742	chr1	-	677	14	FSM	ENSG00000049089.15	ENST00000417105.6	677	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_13	102.136699209656	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGGCAGGGCCCAAGGGA	0	True	NA	NA	False	GGGGCT	-7	NA	40316690	40310289	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_40310318_40310713_40310768_40311092_40311147_40311229_40311287_40311499_40311548_40311661_40311716_40312058_40312113_40312455_40312480_40312573_40312610_40312730_40312785_40314204_40314268_40314351_40314388_40315589_40315665_40316650
H1_mix_00006744	chr1	-	261	1	FSM	ENSG00000227311.3	ENST00000600955.1	480	1	86	133	86	-133	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAGCCAAAGAGAAAGT	NA	False	NA	NA	False	AAAAAG	-1	NA	40333471	40333210	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_40333200_40333500
H1_mix_00006745	chr1	-	1408	8	FSM	ENSG00000117016.10	ENST00000372683.1	1408	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	29.2658469195471	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGTGTGGACATGACTC	246	False	NA	40	True	AAGAAA	-10	NA	40665445	40626213	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_40626730_40628809_40628950_40629270_40629373_40633068_40633182_40635915_40636058_40641708_40641957_40647667_40647763_40665393
H1_mix_00006746	chr1	-	2980	1	FSM	ENSG00000272145.1	ENST00000606277.1	1687	1	-8	-1285	-8	1285	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGTTGTAAGCCACTGA	5	True	NA	-21	True	AATAAA	-5	NA	40692074	40689094	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_40689100_40692100
H1_mix_00006747	chr1	-	2976	13	FSM	ENSG00000010803.16	ENST00000397174.6	2977	13	0	1	0	1	multi-exon	FALSE	canonical	3	34	junction_12	14.6768430604889	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTCTTTTTAATCAGTT	8723	False	NA	-12	True	AATAAA	-16	NA	41152674	41027200	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_41028320_41028583_41028727_41033982_41034049_41037361_41037542_41046406_41046599_41048689_41048891_41070594_41070722_41075218_41075452_41113282_41113527_41116921_41117011_41142877_41143113_41151613_41151685_41152598
H1_mix_00006748	chr1	-	3275	15	FSM	ENSG00000010803.16	ENST00000326197.11	3275	15	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_13	18.9366559554614	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGTCTTTTTAATCAGT	7822	False	NA	-13	True	AATAAA	-15	NA	41160898	41027201	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_41028320_41028583_41028727_41033982_41034049_41037361_41037542_41046406_41046599_41048689_41048891_41070594_41070722_41075218_41075452_41113282_41113527_41116921_41117011_41142877_41143113_41151613_41151685_41152598_41152742_41159724_41159934_41160874
H1_mix_00006749	chr1	-	574	4	FSM	ENSG00000010803.16	ENST00000482530.1	574	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	31.0304509939654	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAGCTACCTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	41070631	41041421	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_41041566_41046406_41046599_41048689_41048891_41070594
H1_mix_00006751	chr1	-	4579	4	ISM	ENSG00000198815.9	ENST00000545068.5	5165	13	125165	-6	-485	0	3prime_fragment	FALSE	canonical	3	164	junction_3	7.07106781186548	1344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATTGGTCTCCGTTGTTT	8899	False	NA	-3	True	AATAAA	-28	NA	42190294	42176538	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_42179826_42181916_42182025_42188736_42188929_42189302
H1_mix_00006752	chr1	-	5309	13	FSM	ENSG00000198815.9	ENST00000372573.5	5309	13	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_12	48.2950279244378	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATTGGTCTCCGTTGTTT	3	True	NA	-3	True	AATAAA	-28	NA	42335877	42176538	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_42179826_42181916_42182025_42188736_42188929_42189302_42189405_42191302_42191720_42194889_42195065_42199101_42199231_42205761_42205864_42227882_42227967_42265114_42265190_42278347_42278673_42311049_42311111_42335625
H1_mix_00006754	chr1	-	543	1	FSM	ENSG00000236876.3	ENST00000424567.1	135	1	0	-408	0	408	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACTTAAAAAAAAAAAAGAAT	75	False	NA	60	True	AATAAA	-11	NA	42500339	42499796	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_42499800_42500300
H1_mix_00006755	chr1	-	2827	15	FSM	ENSG00000117385.16	ENST00000495874.5	2813	15	0	-14	0	13	multi-exon	FALSE	canonical	3	6	junction_9	152.609144615938	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAATGGAAATTTGCCCAT	-11	True	NA	-8	True	AATAAA	-33	NA	42767022	42746360	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_42746853_42747271_42747413_42747722_42747799_42748199_42748318_42750185_42750337_42752273_42752370_42752536_42752665_42754868_42755218_42755547_42755638_42756400_42756456_42757782_42757923_42758851_42758984_42759200_42759391_42762322_42762476_42766506
H1_mix_00006761	chr1	-	3131	5	FSM	ENSG00000228192.9	ENST00000659750.1	3131	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3.64005494464026	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGCACATGCCTGTAATC	-2	True	NA	NA	False	AATACA	-17	NA	42846414	42832521	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_42835132_42842774_42842917_42843403_42843451_42844510_42844685_42846256
H1_mix_00006762	chr1	-	469	5	FSM	ENSG00000228192.9	ENST00000425076.1	536	5	0	67	0	-67	multi-exon	FALSE	canonical	0	0	junction_4	3.69966214673719	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCGCCCAATCTTGGACCA	25	False	NA	NA	False	NA	NA	NA	42846387	42841964	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_42842014_42842774_42842917_42843403_42843451_42844510_42844611_42846256
H1_mix_00006763	chr1	-	438	1	FSM	ENSG00000117394.24	ENST00000629908.1	401	1	-44	7	-44	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTCTTCTAGTTTTGAC	9015	False	NA	NA	False	AATAAA	-6	NA	42952060	42951622	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_42951600_42952100
H1_mix_00006764	chr1	-	549	1	FSM	ENSG00000284138.1	ENST00000639582.1	440	1	-133	24	-133	-24	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAGCCTTTGAGCCCACC	8301	False	NA	NA	False	NA	NA	NA	42952774	42952225	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_42952200_42952800
H1_mix_00006765	chr1	-	1382	10	NNC	ENSG00000117395.13	novel	1352	9	NA	NA	0	51718	intron_retention	FALSE	non_canonical	0	0	junction_1	462.507444050871	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAGATAAGAAAATTAA	-5	True	NA	NA	False	AAAAAG	-6	NA	43172290	43112456	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_43112490_43164186_43164494_43164642_43164806_43166825_43166920_43167159_43167236_43168938_43169029_43170755_43170880_43171478_43171652_43171885_43171970_43172052
H1_mix_00006767	chr1	-	1008	3	FSM	ENSG00000117395.13	ENST00000472982.5	1008	3	0	0	0	0	multi-exon	FALSE	canonical	3	1500	junction_1	60.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGTGAAAAGGAACGTAAGG	17	True	NA	NA	False	NA	NA	NA	43172268	43170943	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_43171652_43171885_43171970_43172052
H1_mix_00006768	chr1	-	382	1	FSM	ENSG00000287113.1	ENST00000671634.1	557	1	-7	182	-7	-182	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCCACACAGACCATGCC	9820	False	NA	NA	False	NA	NA	NA	43348851	43348469	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_43348500_43348900
H1_mix_00006769	chr1	-	1034	8	FSM	ENSG00000066322.15	ENST00000464204.5	1034	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	83.5322252370977	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGCTTTGGTTCCTCACC	-13	True	NA	NA	False	NA	NA	NA	43368007	43363755	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_43364138_43364323_43364461_43364614_43364648_43364737_43364795_43364927_43365009_43365185_43365377_43365563_43365624_43367914
H1_mix_00006775	chr1	-	1494	8	FSM	ENSG00000159479.17	ENST00000290663.10	1483	8	0	-11	0	11	multi-exon	FALSE	canonical	2	9	junction_1	67.3740699833582	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGGTTGTCTGACAGTAA	3	True	NA	-3	True	AATAAA	-26	NA	43389808	43383905	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_43384553_43385045_43385107_43385977_43386227_43386588_43386671_43386857_43386999_43387502_43387648_43388309_43388429_43389758
H1_mix_00006777	chr1	-	797	8	FSM	ENSG00000178922.18	ENST00000372433.5	796	8	0	-1	0	0	multi-exon	FALSE	canonical	2	5	junction_6	22.3889550029127	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATGTCTCTGTAATGGG	891	False	NA	-2	True	ATTAAA	-20	NA	43453716	43451152	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_43451312_43451427_43451545_43451647_43451718_43451797_43451848_43451934_43452014_43452204_43452320_43453412_43453498_43453594
H1_mix_00006778	chr1	-	1026	9	FSM	ENSG00000178922.18	ENST00000372434.5	1025	9	0	-1	0	0	multi-exon	FALSE	canonical	2	10	junction_7	24.8517479264538	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATGTCTCTGTAATGGG	3	True	NA	-2	True	ATTAAA	-20	NA	43453825	43451152	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_43451312_43451409_43451545_43451647_43451718_43451797_43451848_43451934_43452014_43452204_43452320_43452902_43453005_43453412_43453498_43453594
H1_mix_00006779	chr1	-	2180	6	FSM	ENSG00000178922.18	ENST00000372427.5	2173	6	0	-7	0	0	multi-exon	FALSE	canonical	3	54	junction_2	7.69415362466854	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATGTCTCTGTAATGGG	47	True	NA	-2	True	ATTAAA	-20	NA	43453909	43451152	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_43451312_43451427_43451545_43451647_43451718_43451797_43451848_43451934_43452014_43452204
H1_mix_00006780	chr1	-	3305	3	FSM	ENSG00000236200.7	ENST00000434346.1	833	3	0	-2472	0	66	multi-exon	FALSE	canonical	3	6	junction_2	1	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTGCTTTAATTTCTAAT	6219	False	NA	NA	False	TTTAAA	-3	NA	43704469	43699624	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_43702729_43703563_43703648_43704352
H1_mix_00006782	chr1	-	3139	14	FSM	ENSG00000196517.13	ENST00000673836.1	3119	14	0	-20	0	0	multi-exon	FALSE	canonical	2	3	junction_13	20.5388936860327	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCTGCTGTGCTTTGTCT	350	False	NA	0	True	AATGAA	-21	NA	44031177	43996482	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_43997740_43997854_43998026_44000766_44000868_44000955_44001056_44001163_44001299_44001389_44001628_44002312_44002417_44002511_44002647_44002852_44002986_44008352_44008624_44009964_44010097_44010725_44010883_44024247_44024363_44031087
H1_mix_00006783	chr1	-	3288	12	NIC	ENSG00000196517.13	novel	3206	14	NA	NA	-122	-3	intron_retention	FALSE	canonical	3	11	junction_10	20.3282972582921	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCGGCTGCTGTGCTTTG	NA	False	NA	-3	True	AATGAA	-18	NA	44031589	43996485	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_43998026_44000766_44000868_44000955_44001056_44001163_44001299_44001389_44001628_44002312_44002417_44002511_44002647_44002852_44002986_44008352_44008624_44009964_44010097_44024247_44024363_44031305
H1_mix_00006784	chr1	-	3645	13	NNC	ENSG00000196517.13	novel	3206	14	NA	NA	-122	-3	intron_retention	FALSE	canonical	2	8	junction_1	20.1363408349735	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCGGCTGCTGTGCTTTG	NA	False	NA	-3	True	AATGAA	-18	NA	44031589	43996485	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_43998226_44000766_44000868_44000955_44001056_44001163_44001299_44001389_44001628_44002312_44002417_44002511_44002647_44002852_44002986_44008352_44008624_44009964_44010097_44010725_44010883_44024247_44024363_44031305
H1_mix_00006785	chr1	-	1881	12	FSM	ENSG00000196517.13	ENST00000475075.6	1881	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_10	22.0371587015287	2097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGGACGGCTGCTGTCA	-12	True	NA	NA	False	NA	NA	NA	44031386	43997442	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_43997740_43997854_43998026_44000766_44000868_44000955_44001056_44001163_44001299_44001389_44001628_44002312_44002417_44002511_44002647_44002852_44002986_44008352_44008624_44024247_44024363_44031305
H1_mix_00006786	chr1	-	1718	10	NNC	ENSG00000117419.16	novel	1417	10	NA	NA	0	54341	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	512.729322376526	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACATACATAGACATGAAAG	3	True	NA	NA	False	NA	NA	NA	44355238	44166728	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_44166755_44221091_44221641_44247938_44248039_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44339044_44339323_44352849_44352926_44354891
H1_mix_00006787	chr1	-	1713	10	NNC	ENSG00000117419.16	novel	1417	10	NA	NA	0	21009	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	512.729322376526	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGTGTAGGTACCTGTTG	3	True	NA	NA	False	NA	NA	NA	44355238	44200060	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_44200084_44221093_44221641_44247938_44248039_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44339044_44339323_44352849_44352926_44354891
H1_mix_00006788	chr1	-	1411	6	NIC	ENSG00000117419.16	novel	1733	9	NA	NA	0	140	combination_of_known_splicesites	FALSE	canonical	3	90	junction_1	660.53693310821	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCACACATCTGTGTAAGC	-8	True	NA	NA	False	NA	NA	NA	44355249	44220929	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_44221641_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44354891
H1_mix_00006789	chr1	-	1205	7	NNC	ENSG00000117419.16	novel	1097	7	NA	NA	-51	140	at_least_one_novel_splicesite	FALSE	canonical	3	238	junction_6	439.86689906026	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCACACATCTGTGTAAGC	-1	True	NA	NA	False	NA	NA	NA	44355311	44220929	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_44221641_44247938_44248039_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44355259
H1_mix_00006790	chr1	-	1483	8	NNC	ENSG00000117419.16	novel	1733	9	NA	NA	-51	140	at_least_one_novel_splicesite	FALSE	canonical	3	162	junction_7	458.183013073802	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCACACATCTGTGTAAGC	-1	True	NA	NA	False	NA	NA	NA	44355311	44220929	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_44221641_44247938_44248039_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44339044_44339323_44355259
H1_mix_00006794	chr1	-	1472	3	FSM	ENSG00000126106.14	ENST00000372244.3	1472	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	3	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATGTTGCTAGGTATCT	-24	True	NA	-4	True	AATAAA	-20	NA	44674477	44635237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_44636458_44645359_44645465_44674330
H1_mix_00006795	chr1	-	553	1	FSM	ENSG00000234093.3	ENST00000594193.1	385	1	-111	-57	-111	57	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTGGGCATGGCAGTG	7343	False	NA	NA	False	AATAAA	-25	NA	44780826	44780273	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_44780300_44780800
H1_mix_00006796	chr1	-	502	2	NNC	ENSG00000142959.5	novel	2512	9	NA	NA	3434	1749	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	90	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGCATATATTTGAGTAC	3433	False	NA	0	True	AATAAA	-26	NA	44784736	44781835	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_44782230_44784628
H1_mix_00006797	chr1	-	1818	11	FSM	ENSG00000070785.17	ENST00000620860.4	1923	11	0	105	0	-105	multi-exon	FALSE	canonical	3	14	junction_1	109.698176830793	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCAACCCAGTCCTGAAAG	5532	False	NA	NA	False	NA	NA	NA	44986722	44850626	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_44851004_44874677_44874827_44875617_44875696_44879817_44880009_44881611_44881740_44897354_44897445_44926627_44926740_44941505_44941666_44978314_44978461_44981020_44981178_44986492
H1_mix_00006798	chr1	-	565	4	FSM	ENSG00000070785.17	ENST00000487532.5	753	4	0	188	0	-188	multi-exon	FALSE	canonical	2	4	junction_1	171.701938124051	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCGGACAATATCTAGCT	-4	True	NA	NA	False	NA	NA	NA	44986595	44958748	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_44958908_44978314_44978461_44981020_44981178_44986492
H1_mix_00006799	chr1	-	2522	13	FSM	ENSG00000126107.15	ENST00000372168.7	2530	13	0	8	0	0	multi-exon	FALSE	canonical	3	162	junction_9	20.6160334044484	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTCAGAATGTGTTTAT	2760	False	NA	-7	True	AATAAA	-13	NA	45008551	45002547	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45003577_45003668_45003741_45003854_45003937_45004059_45004135_45004247_45004378_45004599_45004807_45005793_45005884_45005996_45006117_45006691_45006796_45006950_45007016_45007218_45007272_45007412_45007596_45008239
H1_mix_00006803	chr1	-	1743	16	FSM	ENSG00000132781.20	ENST00000481571.5	1742	16	0	-1	0	1	multi-exon	FALSE	canonical	2	24	junction_14	66.2559347446618	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTTGTATTTTTTTGA	30	True	NA	-3	True	AGTAAA	-21	NA	45340388	45329240	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333498_45334390_45334512_45340218
H1_mix_00006804	chr1	-	1892	16	FSM	ENSG00000132781.20	ENST00000672818.3	1891	16	0	-1	0	1	multi-exon	TRUE	canonical	2	22	junction_14	66.6261210037024	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTTGTATTTTTTTGA	-22	True	NA	-3	True	AGTAAA	-21	NA	45340440	45329240	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333595_45334390_45334512_45340218
H1_mix_00006805	chr1	-	1839	16	NIC	ENSG00000132781.20	novel	1708	16	NA	NA	1547	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_15	65.7099349836503	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTTGTATTTTTTTG	2030	False	NA	-4	True	AGTAAA	-20	NA	45338388	45329241	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333562_45334390_45334512_45338185
H1_mix_00006807	chr1	-	1600	15	NIC	ENSG00000132781.20	novel	1888	16	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	2	12	junction_10	72.776180505572	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTTAGTAAAGTGCTTA	162	False	NA	-36	True	NA	NA	NA	45340256	45329273	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45333096_45333171_45333284_45333325_45333412_45333562_45334390_45334512_45340218
H1_mix_00006818	chr1	-	3017	10	FSM	ENSG00000070759.17	ENST00000486676.5	3019	10	3	-1	3	0	multi-exon	FALSE	canonical	0	0	junction_7	15.3043203776653	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCAGCCTTCTTACTTG	4	True	NA	-1	True	AATAAA	-17	NA	45491158	45343882	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45345559_45345876_45345995_45346692_45346780_45346978_45347063_45347608_45347694_45347917_45348001_45355302_45355450_45421724_45421847_45457563_45457872_45490851
H1_mix_00006819	chr1	-	1534	5	FSM	ENSG00000280670.3	ENST00000629009.2	1694	5	163	-3	163	3	multi-exon	FALSE	canonical	1	1	junction_4	7.34846922834953	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCCTTAGTGGGAGTGAT	6655	False	NA	-8	True	AATAAA	-19	NA	45498462	45493933	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45495167_45495417_45495546_45496555_45496624_45497298_45497384_45498442
H1_mix_00006820	chr1	-	2046	5	FSM	ENSG00000280670.3	ENST00000629482.3	2095	5	8	41	8	19	multi-exon	FALSE	canonical	3	11	junction_1	8.74642784226795	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCTATTATATTTCAT	4	True	NA	19	True	NA	NA	NA	45500065	45493906	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45495167_45496555_45496624_45497298_45497384_45499344_45499444_45499531
H1_mix_00006821	chr1	-	3603	13	NIC	ENSG00000159592.11	novel	3641	13	NA	NA	78	21	combination_of_known_junctions	FALSE	canonical	3	40	junction_12	196.02742155117	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTTAGTGCCCATGTA	45	True	NA	4	True	AATAAA	-34	NA	45687055	45627282	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_45628409_45629575_45629679_45630481_45630607_45633488_45633648_45634095_45634237_45640209_45640404_45642426_45642500_45654542_45654830_45655189_45655320_45659027_45659143_45660183_45661226_45685575_45685621_45686992
H1_mix_00006823	chr1	-	494	1	FSM	ENSG00000234329.1	ENST00000437848.1	788	1	338	-44	338	44	mono-exon	FALSE	NA	NA	NA	NA	NA	911	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATGCAAATTTTCCTAAA	9340	False	NA	NA	False	ATTAAA	-33	NA	45651488	45650994	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45651000_45651500
H1_mix_00006828	chr1	-	2641	21	FSM	ENSG00000085998.15	ENST00000691209.1	2662	21	25	-4	2	0	multi-exon	FALSE	canonical	2	11	junction_11	128.650145744185	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCTTGTGATTGTGATT	-4	True	NA	-16	True	ATTAAA	-20	NA	46198432	46188682	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_46189358_46189457_46189568_46189853_46189990_46190472_46190518_46190719_46190785_46192097_46192224_46192307_46192437_46192517_46192591_46192899_46192959_46193173_46193216_46193304_46193389_46193854_46193926_46194273_46194402_46194552_46194652_46194843_46194962_46195810_46195925_46196011_46196078_46196730_46196850_46196969_46197085_46197701_46197872_46198335
H1_mix_00006832	chr1	-	2587	12	FSM	ENSG00000079277.22	ENST00000341183.9	2612	12	26	-1	0	0	multi-exon	FALSE	canonical	2	2	junction_7	50.684080666989	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTGGTCCTTTTTTTTT	-17	True	NA	0	True	AATAAA	-24	NA	46604268	46557406	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_46558801_46560233_46560278_46561477_46561643_46562648_46562844_46565040_46565137_46568442_46568499_46572062_46572168_46576574_46576655_46580529_46580628_46583227_46583330_46594112_46594281_46604184
H1_mix_00006833	chr1	-	1594	13	NIC	ENSG00000079277.22	novel	2661	13	NA	NA	4	-13	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	41.1105386596781	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGGAGGAAAAAGCTTTT	9	True	NA	NA	False	NA	NA	NA	46604242	46558405	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_46558801_46560233_46560278_46561477_46561643_46562648_46562844_46565040_46565137_46568442_46568499_46572062_46572168_46574946_46575021_46576574_46576655_46580529_46580628_46583227_46583330_46594112_46594281_46604226
H1_mix_00006837	chr1	-	429	4	FSM	ENSG00000123472.12	ENST00000492233.5	429	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	334.463749904231	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGATAAATGTGTGGGGCA	NA	False	NA	NA	False	NA	NA	NA	46645256	46633677	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_46633829_46635896_46635971_46643193_46643302_46645160
H1_mix_00006838	chr1	-	1214	6	FSM	ENSG00000123472.12	ENST00000526821.5	1222	6	8	0	8	0	multi-exon	FALSE	canonical	3	71	junction_1	324.243365390874	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGCAGTATAAATAAAATTC	3097	False	NA	-41	True	AATGAA	-4	NA	46665364	46635078	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_46635971_46652580_46652629_46653816_46653868_46658126_46658190_46658686_46658738_46665255
H1_mix_00006842	chr1	-	8344	9	FSM	ENSG00000159658.15	ENST00000479745.6	8344	9	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_4	20.6881608655772	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAATGTGTCTGACTAAA	-10	True	NA	-6	True	AATAAA	-16	NA	46719123	46675164	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_46678637_46683299_46683426_46684490_46684603_46686783_46689692_46691826_46691938_46696550_46696650_46707905_46708052_46716294_46716444_46717902
H1_mix_00006845	chr1	-	4841	18	NIC	ENSG00000123473.17	novel	5351	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	47	junction_12	21.441479058625	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACTTAATAAAATGTCTA	-25	True	NA	-40	True	TATAAA	-38	NA	47314147	47250172	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_47251923_47260288_47260540_47262902_47263114_47269634_47269867_47272075_47272242_47280240_47281210_47282344_47282460_47287550_47287661_47289434_47289586_47293457_47293545_47295764_47295849_47299904_47299969_47300109_47300153_47301560_47301749_47302233_47302347_47304888_47304997_47310275_47310363_47314035
H1_mix_00006848	chr1	-	3396	1	FSM	ENSG00000272491.1	ENST00000606809.1	1674	1	-264	-1458	-264	1458	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCGCAGTGGGAACCTGG	NA	False	NA	NA	False	NA	NA	NA	48229825	48226429	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_48226400_48229800
H1_mix_00006849	chr1	-	5233	13	FSM	ENSG00000132122.12	ENST00000371843.7	2297	13	-194	-2742	0	278	multi-exon	FALSE	canonical	3	19	junction_2	17.7920081934434	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGCCTCATCAATTTATT	-5	True	NA	NA	False	NA	NA	NA	48472204	48295094	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_48298894_48305786_48305879_48355717_48355770_48359585_48359771_48385308_48385350_48395266_48395355_48399350_48399645_48403801_48403883_48411463_48411589_48413109_48413152_48451551_48451601_48452993_48453132_48471957
H1_mix_00006853	chr1	-	2751	2	FSM	ENSG00000142700.12	ENST00000418121.5	2840	2	88	1	88	-1	multi-exon	FALSE	canonical	2	3	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCGAATCCCGTCCCGCT	1948	False	NA	NA	False	AATAAA	-21	NA	50421544	50417550	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_50419735_50420977
H1_mix_00006856	chr1	-	4257	26	NNC	ENSG00000085832.17	novel	5163	25	NA	NA	0	-968	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_24	50.5581012301688	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAAATGGTGCTTGTTTT	13	True	NA	-11	True	AATAAA	-26	NA	51519245	51355230	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_51356847_51361170_51361356_51363865_51364029_51365952_51366030_51394380_51394448_51399031_51399166_51400917_51400954_51402434_51402526_51403418_51403533_51405904_51406109_51408134_51408333_51409534_51409697_51421785_51421859_51440346_51440433_51444888_51445046_51446959_51447106_51448045_51448136_51461090_51461151_51463672_51463799_51465260_51465327_51468472_51468569_51471689_51471738_51472858_51472949_51481272_51481315_51508688_51508772_51519198
H1_mix_00006858	chr1	-	3422	33	FSM	ENSG00000078618.23	ENST00000539524.5	3417	33	0	-5	0	0	multi-exon	FALSE	canonical	0	0	junction_20	340.051522693161	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGTTTGTATTTTATG	0	True	NA	-3	True	AATAAA	-45	NA	51878040	51789190	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_51789434_51789567_51789658_51790532_51790650_51790899_51790991_51791577_51791662_51792045_51792099_51792376_51792425_51794471_51794611_51794822_51794855_51798248_51798412_51800555_51800684_51803813_51803965_51805509_51805562_51806793_51806914_51809314_51809402_51810280_51810405_51811993_51812099_51814034_51814090_51814550_51814610_51814692_51814814_51816311_51816390_51818065_51818136_51819799_51819874_51821497_51821556_51823663_51823787_51825286_51825383_51827795_51827870_51834016_51834171_51836130_51836213_51836368_51836439_51837486_51837621_51840225_51840515_51877982
H1_mix_00006859	chr1	-	3477	31	NNC	ENSG00000078618.23	novel	3594	31	NA	NA	0	-110	at_least_one_novel_splicesite	FALSE	canonical	1	92	junction_20	185.323875657965	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTGGCAGATTGTATCA	3	True	NA	-139	True	NA	NA	NA	51878723	51789326	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_51789434_51789567_51789658_51790532_51790650_51790899_51790991_51791577_51791662_51792045_51792099_51792376_51792425_51794471_51794611_51794822_51794855_51798248_51798412_51800555_51800684_51803813_51803965_51805509_51805562_51806793_51806914_51809314_51809402_51810280_51810405_51811993_51812099_51814034_51814090_51814550_51814610_51814692_51814814_51816307_51816390_51818065_51818136_51819799_51819874_51821497_51821556_51823663_51823787_51825286_51825383_51827795_51827870_51834016_51834171_51836130_51836213_51840225_51840515_51878274
H1_mix_00006861	chr1	-	1448	8	NNC	ENSG00000117862.13	novel	1416	7	NA	NA	0	959	intron_retention	TRUE	non_canonical	0	0	junction_1	484.580441290848	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCAGCCATCTTTAAGAT	-5	True	NA	NA	False	NA	NA	NA	52055191	52019171	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_52019204_52020130_52021013_52023490_52023575_52024509_52024580_52027274_52027349_52028577_52028631_52041536_52041598_52054999
H1_mix_00006862	chr1	-	1447	8	NNC	ENSG00000117862.13	novel	1416	7	NA	NA	0	959	intron_retention	FALSE	non_canonical	0	0	junction_1	484.580441290848	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCAGCCATCTTTAAGAT	-5	True	NA	NA	False	NA	NA	NA	52055191	52019171	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_52019203_52020130_52021013_52023490_52023575_52024509_52024580_52027274_52027349_52028577_52028631_52041536_52041598_52054999
H1_mix_00006863	chr1	-	5642	24	FSM	ENSG00000154222.15	ENST00000371586.6	5642	24	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_11	12.8463362632123	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTCTTGCTTACAATTAA	-26	True	NA	2	True	AATAAA	-24	NA	52366193	52350592	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_52353648_52354607_52354699_52354839_52354940_52355397_52355450_52355607_52355667_52355770_52355845_52356185_52356303_52356383_52356443_52357000_52357127_52357525_52357699_52357780_52357917_52358330_52358462_52358685_52358759_52359026_52359158_52359249_52359358_52359458_52359535_52359704_52359884_52360073_52360234_52360423_52360550_52360973_52361133_52361512_52361617_52362601_52362747_52364551_52364635_52366068
H1_mix_00006867	chr1	-	1141	3	FSM	ENSG00000134744.14	ENST00000471623.1	506	3	-276	-359	81	-2	multi-exon	FALSE	canonical	3	62	junction_1	107	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGGTTAATCTGTTGTA	5613	False	NA	-9	True	AATAAA	-19	NA	52431357	52423276	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_52423914_52425348_52425508_52431012
H1_mix_00006874	chr1	-	524	2	Genic_Genomic	ENSG00000228929.1	novel	455	1	NA	NA	0	25508	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCCGATCTTTATTTTTT	27	False	NA	NA	False	AAAACA	-41	NA	52772648	52746685	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_-_52746716_52772154
H1_mix_00006876	chr1	-	2645	8	FSM	ENSG00000121310.17	ENST00000460612.5	2645	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	42.7417494126895	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGGTATCATTGGCTCT	-15	True	NA	-19	True	ATTAAA	-15	NA	52921762	52896222	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_52896598_52899173_52899225_52904645_52904834_52905033_52906612_52907867_52907955_52911565_52911654_52911722_52911791_52921552
H1_mix_00006877	chr1	-	1006	8	NIC	ENSG00000121310.17	novel	1126	9	NA	NA	11	0	combination_of_known_splicesites	TRUE	canonical	1	1	junction_5	45.1659073159554	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTGAGTCTTGGTATC	4	True	NA	-28	True	ATTAAA	-6	NA	52921692	52896231	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_52896598_52897436_52897485_52899173_52899225_52904645_52904834_52905033_52905091_52911565_52911654_52911722_52911791_52921552
H1_mix_00006878	chr1	-	1449	8	NIC	ENSG00000121310.17	novel	1606	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_6	52.2040736544807	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTGAGTCTTGGTATC	26	True	NA	-28	True	ATTAAA	-6	NA	52921721	52896231	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_52896598_52899173_52899225_52904645_52904834_52907867_52907955_52911565_52911654_52911722_52912022_52913894_52914096_52921552
H1_mix_00006885	chr1	-	3761	16	NIC	ENSG00000157193.18	novel	4324	18	NA	NA	4	0	intron_retention	FALSE	canonical	2	10	junction_10	100.364137021149	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTATAGATGTTCTTCAT	-6	True	NA	-7	True	AATAAA	-18	NA	53328046	53245544	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_53247057_53249379_53249557_53250689_53250863_53255116_53255186_53258318_53258472_53260463_53260606_53262067_53262208_53262445_53262565_53264168_53264397_53266472_53266648_53271226_53271347_53275630_53275754_53280586_53280716_53289566_53289690_53326872_53326993_53327788
H1_mix_00006888	chr1	-	2235	7	ISM	ENSG00000157193.18	ENST00000661457.1	3910	17	65481	5	4	0	3prime_fragment	FALSE	canonical	3	42	junction_3	99.069700491904	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGTATAGATGTTCTTC	NA	False	NA	-9	True	AATAAA	-16	NA	53262493	53245546	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_53247057_53250689_53250863_53255116_53255186_53258318_53258472_53260463_53260606_53262067_53262208_53262445
H1_mix_00006897	chr1	-	808	8	FSM	ENSG00000058799.15	ENST00000465897.5	808	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	136.47994545062	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGTCTATGGATATT	9	True	NA	NA	False	NA	NA	NA	53889780	53866803	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_53866925_53871371_53871489_53878314_53878403_53878641_53878723_53882942_53883032_53883112_53883277_53888906_53888987_53889712
H1_mix_00006900	chr1	-	1745	9	NNC	ENSG00000116209.12	novel	6457	8	NA	NA	-7	811	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	293.355586277132	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGTAGGCAATGGGCA	18	False	54053466	NA	False	NA	NA	NA	54053448	54025869	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_54025907_54031673_54032306_54036609_54036719_54040755_54040838_54041723_54041806_54043372_54043526_54045691_54045787_54047266_54047373_54052999
H1_mix_00006901	chr1	-	1850	5	FSM	ENSG00000116209.12	ENST00000371344.5	2473	5	623	0	623	0	multi-exon	FALSE	canonical	3	596	junction_3	133.948450905563	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGCTGAAATTTGAGT	9147	False	NA	-13	True	ATTAAA	-16	NA	54044319	54031675	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_54032306_54036609_54036719_54040755_54040838_54041723_54041806_54043372
H1_mix_00006902	chr1	-	1041	8	NNC	ENSG00000116209.12	novel	1116	8	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	3	205	junction_3	293.479339049582	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGGATGTTTGGGATTGT	-3	True	NA	28	True	NA	NA	NA	54053426	54031965	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_54032306_54036609_54036719_54040755_54040841_54041723_54041806_54043372_54043526_54045691_54045787_54047266_54047373_54053355
H1_mix_00006904	chr1	-	679	3	FSM	ENSG00000215883.11	ENST00000497820.1	679	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAATAGCATTTACTATC	3611	False	NA	-4	True	AATAAA	-15	NA	54196404	54190550	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_54190897_54195418_54195716_54196368
H1_mix_00006905	chr1	-	1961	16	NIC	ENSG00000157216.16	novel	3020	17	NA	NA	9	653	combination_of_known_splicesites	TRUE	canonical	3	17	junction_11	78.9268578424917	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTCCATGGCAACAGCA	7267	False	NA	NA	False	NA	NA	NA	54406214	54226401	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_54227161_54228254_54228357_54228448_54228478_54228747_54228827_54239128_54239200_54240904_54240960_54241473_54241510_54242163_54242213_54243234_54243300_54251615_54251693_54251793_54251861_54281437_54281528_54401860_54401946_54404575_54404638_54404857_54404931_54405952
H1_mix_00006907	chr1	-	4327	10	NNC	ENSG00000116133.13	novel	4314	10	NA	NA	-78	76003	intron_retention	FALSE	non_canonical	0	0	junction_1	816.345106761432	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTTCTGTTCTTTATAA	NA	False	NA	NA	False	NA	NA	NA	54887273	54773623	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_54773649_54849635_54852387_54853433_54853613_54854036_54854235_54865302_54865447_54871349_54871614_54875092_54875212_54875941_54876048_54883617_54883774_54886888
H1_mix_00006912	chr1	-	1532	3	FSM	ENSG00000162402.14	ENST00000480962.1	406	3	-586	-540	-586	0	multi-exon	FALSE	canonical	3	175	junction_2	9.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAACTAAGTGTCAGTTAA	NA	False	NA	-3	True	AATAAA	-31	NA	55073578	55071272	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_55071925_55072316_55072404_55072785
H1_mix_00006917	chr1	-	5301	15	FSM	ENSG00000173406.16	ENST00000371236.7	5301	15	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_8	28.2883296049225	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTAGCCTGGCTTTATTCT	-12	True	NA	1	True	AATAAA	-18	NA	57424060	56994777	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_56998129_57010679_57010791_57011144_57011273_57014882_57015432_57023530_57023640_57025980_57026044_57062883_57062944_57069359_57069426_57071022_57071062_57071521_57071642_57072282_57072415_57136542_57136642_57145289_57145430_57290963_57291167_57423929
H1_mix_00006920	chr1	-	676	4	NNC	ENSG00000173406.16	novel	722	3	NA	NA	903	1408	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	54.6524371724527	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTTTCCTGTCTTGGGA	1176	False	NA	NA	False	AATAAA	-18	NA	57423154	57144008	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_57144204_57145289_57145430_57290963_57291167_57423016
H1_mix_00006925	chr1	-	1934	1	FSM	ENSG00000184292.7	ENST00000371225.4	1820	1	-134	20	-134	-20	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAATATGGGAAAGGCA	64	False	NA	NA	False	AATAAA	-11	NA	58577386	58575452	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_58575500_58577400
H1_mix_00006926	chr1	-	583	1	FSM	ENSG00000185839.3	ENST00000427762.1	690	1	79	28	79	-28	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGCCTTCTCCAAAGCCA	102	False	NA	NA	False	NA	NA	NA	58631451	58630868	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_58630900_58631500
H1_mix_00006927	chr1	-	8006	20	NIC	ENSG00000162601.11	novel	7751	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	25	junction_15	52.5476172396268	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTGGATTATTTCTAAA	3	True	NA	-17	True	AATAAA	-19	NA	58700062	58654738	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_58660156_58661169_58661228_58661405_58661512_58665498_58665632_58667037_58667227_58667846_58667922_58668631_58668683_58668983_58669039_58671869_58671959_58673572_58673651_58675476_58675581_58676925_58677057_58681784_58682546_58685152_58685252_58689037_58689368_58690225_58690250_58690339_58690418_58692860_58692932_58695128_58695208_58699984
H1_mix_00006929	chr1	-	405	1	FSM	ENSG00000270457.1	ENST00000604999.1	338	1	-99	32	-99	-32	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACTATTAAAAGAGAAAATG	2964	False	NA	NA	False	AAAAAG	-21	NA	59289739	59289334	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_59289300_59289700
H1_mix_00006930	chr1	-	415	2	ISM	ENSG00000134716.11	ENST00000371204.4	1879	9	-14	22629	-14	-22617	5prime_fragment	FALSE	canonical	3	12	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTTCTTGGCCAACGAA	16	True	NA	NA	False	AAGAAA	-6	NA	59926787	59915936	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_59916101_59926536
H1_mix_00006934	chr1	-	6868	49	NIC	ENSG00000116641.18	novel	7084	50	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_7	30.4100449413238	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTACCGAGTGGGACTT	6	True	NA	-6	True	ATTAAA	-19	NA	62688350	62455012	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_62455457_62457537_62457706_62473981_62474089_62475207_62475352_62475706_62475944_62476066_62476157_62477699_62477826_62488933_62489066_62492703_62492848_62494274_62494468_62495580_62495682_62496338_62496498_62504629_62504783_62505681_62505817_62507961_62508059_62510576_62510674_62513470_62513607_62513715_62513899_62528150_62528306_62529276_62529447_62535492_62535633_62537890_62538062_62539544_62539659_62539751_62539893_62542607_62542704_62543655_62543746_62544946_62545040_62552731_62552902_62555824_62555990_62558988_62559221_62561616_62561704_62577261_62577364_62578827_62578967_62583183_62583255_62586506_62586625_62618705_62618869_62619899_62619994_62625258_62625402_62631239_62631406_62633497_62633579_62634772_62634923_62636536_62636604_62647690_62647777_62648105_62648319_62648414_62648545_62653724_62653794_62653983_62654160_62663024_62663131_62688226
H1_mix_00006938	chr1	-	1247	4	NNC	ENSG00000230798.6	novel	1019	4	NA	NA	17	36556	intron_retention	TRUE	non_canonical	0	0	junction_1	444.063058585152	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATGAACAGCCGTGTAA	17	True	NA	NA	False	AAAAAG	-6	NA	63322436	63284321	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_63284353_63320883_63321191_63321366_63321464_63321624
H1_mix_00006939	chr1	-	1648	4	FSM	ENSG00000230798.6	ENST00000685680.1	837	4	32	-843	17	837	multi-exon	FALSE	canonical	0	0	junction_1	268.519810980287	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCGCGTAGCGTGAAAAGCA	17	True	NA	NA	False	AATAAA	-33	NA	63322436	63320040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_63321191_63321366_63321464_63321664_63321945_63322315
H1_mix_00006940	chr1	-	1257	3	FSM	ENSG00000230798.6	ENST00000686970.1	492	3	-771	6	17	0	multi-exon	FALSE	canonical	0	0	junction_1	516.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	17	True	NA	-53	True	AATAAA	-24	NA	63322436	63320883	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_63321191_63321366_63321464_63321583
H1_mix_00006947	chr1	-	599	1	FSM	ENSG00000199135.1	ENST00000362265.1	75	1	67	-591	67	591	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTATTGCTGCTGCTGTC	9337	False	NA	NA	False	NA	NA	NA	65058441	65057842	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_65057800_65058400
H1_mix_00006948	chr1	-	7457	9	NNC	ENSG00000142864.15	novel	3482	8	NA	NA	0	974	at_least_one_novel_splicesite	TRUE	non_canonical	3	42	junction_1	1484.08717735853	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTTTTAATTTGATTTTG	31	False	NA	3	True	AATAAA	-31	NA	67430386	67406835	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_67408987_67409213_67413264_67415165_67415340_67420008_67420187_67424199_67424323_67424887_67424978_67425082_67425224_67426134_67426286_67429987
H1_mix_00006951	chr1	-	3844	12	NNC	ENSG00000024526.17	novel	5299	12	NA	NA	48	-18	intron_retention	FALSE	canonical	3	15	junction_5	61.2748853140333	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTTTAATGACTGTTCT	90	False	NA	-18	True	AATAAA	-5	NA	68497034	68475591	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_68477070_68477786_68477973_68479143_68479321_68481439_68481613_68482045_68482931_68483949_68484091_68486936_68486985_68488373_68488505_68488915_68489035_68489451_68489609_68494429_68494696_68496951
H1_mix_00006953	chr1	-	2567	5	NNC	ENSG00000118454.13	novel	809	4	NA	NA	0	22206	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	90.8910749193781	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGACATAGTAATTTTT	NA	False	NA	NA	False	NA	NA	NA	70276843	70236792	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_70236821_70260587_70262848_70270855_70270957_70274719_70274819_70276764
H1_mix_00006954	chr1	-	1491	3	FSM	ENSG00000050628.21	ENST00000628037.2	1815	3	79	245	59	-25	multi-exon	TRUE	canonical	0	0	junction_1	2.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGCGTATACATTATCA	5	True	NA	NA	False	ATTAAA	-28	NA	71047729	70852597	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_70852860_71012304_71012485_71046680
H1_mix_00006956	chr1	-	251	4	FSM	ENSG00000225087.2	ENST00000666853.1	603	4	0	352	0	-264	multi-exon	FALSE	canonical	1	2	junction_2	0.942809041582063	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCAGCTAGGTACTTAGG	NA	False	NA	NA	False	NA	NA	NA	72898831	72749184	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_72749277_72766644_72766688_72850749_72850801_72898766
H1_mix_00006958	chr1	-	546	2	Intergenic	novelGene_65	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGGGCTGGGGGATGGTC	NA	False	NA	NA	False	NA	NA	NA	75383450	75377499	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_-_75377786_75383190
H1_mix_00006959	chr1	-	742	1	FSM	ENSG00000230863.3	ENST00000446582.2	742	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGATTCCTCATGTTTTGC	NA	False	NA	NA	False	NA	NA	NA	75642087	75641345	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_75641300_75642100
H1_mix_00006960	chr1	-	1615	1	FSM	ENSG00000223905.1	ENST00000394513.2	664	1	111	-1062	111	1062	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	76354135	76352520	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_76352500_76354100
H1_mix_00006961	chr1	-	4783	14	NIC	ENSG00000036549.13	novel	6412	15	NA	NA	0	527	combination_of_known_junctions	TRUE	canonical	0	0	junction_13	95.0081279612341	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTACATAGCAGGGTACTAA	1	True	NA	NA	False	TTTAAA	-31	NA	77682658	77563978	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_77565785_77566080_77566182_77568331_77568467_77576067_77576221_77578773_77578870_77579526_77579629_77580997_77581070_77581775_77581889_77581978_77582127_77584516_77584656_77631849_77633406_77639448_77639603_77641521_77641656_77682584
H1_mix_00006964	chr1	-	949	9	FSM	ENSG00000077254.14	ENST00000524536.5	949	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	164.323613640889	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTAATTGGTAAATAGAG	181	False	NA	NA	False	NA	NA	NA	77759689	77734356	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77745420_77745600_77746398_77746557_77759642
H1_mix_00006966	chr1	-	921	1	FSM	ENSG00000219201.4	ENST00000427577.1	921	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGACATGATGAACCTGG	NA	False	NA	NA	False	AAGAAA	-43	NA	77811781	77810860	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_77810900_77811800
H1_mix_00006967	chr1	-	2156	3	FSM	ENSG00000162613.17	ENST00000489495.5	2156	3	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	28	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGGAGTGCTTTGTGTTT	1101	False	NA	NA	False	AATAAA	-20	NA	77948333	77944054	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_77944270_77945505_77945643_77946529
H1_mix_00006968	chr1	-	5835	21	NIC	ENSG00000162613.17	novel	2201	21	NA	NA	0	-4	intron_retention	FALSE	canonical	3	119	junction_1	187.626190868972	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATAAAGGAGTGCTTTGT	-16	True	NA	NA	False	AATAAA	-16	NA	77979087	77944058	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_77945643_77946529_77948775_77949154_77949301_77955254_77955330_77956571_77956701_77960183_77960264_77960343_77960496_77962769_77962931_77963573_77963716_77964061_77964163_77964253_77964357_77964645_77964748_77964869_77964969_77965068_77965232_77966693_77966752_77966883_77966956_77967048_77967099_77967626_77967667_77968164_77968204_77969924_77970016_77978884
H1_mix_00006969	chr1	-	5513	21	NIC	ENSG00000162613.17	novel	6714	20	NA	NA	0	0	intron_retention	TRUE	canonical	3	63	junction_1	197.915000694743	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGGAGTGCTTTGTGTTT	-5	True	NA	NA	False	AATAAA	-20	NA	77979110	77944054	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_77944270_77945505_77948775_77949154_77949301_77955254_77955330_77956571_77956701_77960183_77960264_77960343_77960496_77962769_77962931_77963573_77963716_77964061_77964163_77964253_77964357_77964645_77964748_77964869_77964969_77965068_77965232_77966693_77966752_77966883_77966956_77967048_77967099_77967626_77967667_77968164_77968204_77969924_77970016_77978884
H1_mix_00006976	chr1	-	5706	13	FSM	ENSG00000117155.17	ENST00000437941.6	5843	13	0	137	0	-137	multi-exon	FALSE	canonical	3	12	junction_12	63.2184813870824	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTCAGTGACATATGAA	-10	True	NA	67	True	NA	NA	NA	84690468	84643843	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_84647608_84650361_84650528_84651882_84651998_84655831_84656006_84656347_84656485_84658317_84658469_84662197_84662376_84662454_84662531_84664416_84664553_84666121_84666233_84669680_84669894_84670645_84670816_84690153
H1_mix_00006979	chr1	-	2713	4	FSM	ENSG00000055732.13	ENST00000474447.1	2727	4	0	14	0	-14	multi-exon	FALSE	canonical	3	31	junction_2	3.09120616516523	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATACCAAATGCATTTTT	NA	False	NA	NA	False	ATTAAA	-2	NA	85023520	85018096	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_85019258_85021069_85021277_85022069_85022193_85022298
H1_mix_00006980	chr1	-	2777	11	FSM	ENSG00000055732.13	ENST00000490600.6	2777	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_10	13.720058308914	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAATAGAAAAAAAAAACAGA	-21	True	NA	NA	False	NA	NA	NA	85048499	85024556	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_85026089_85026171_85026285_85029105_85029206_85032695_85032793_85032871_85032957_85034097_85034252_85036709_85036869_85041009_85041178_85045132_85045363_85047574_85047610_85048395
H1_mix_00006982	chr1	-	1396	5	Fusion	ENSG00000162642.14_ENSG00000097096.9	novel	3391	4	NA	NA	0	19	multi-exon	FALSE	non_canonical	0	0	junction_1	196.063765137773	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTAGCTTCCTGAAGCT	-3	True	NA	NA	False	NA	NA	NA	85259662	85181139	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_-_85181170_85251967_85252703_85258523_85258723_85258934_85259062_85259357
H1_mix_00006983	chr1	-	3965	7	NNC	ENSG00000153904.21	novel	3939	6	NA	NA	0	35531	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	101.271362629763	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACACTGGCCTTATTATCA	2	True	NA	NA	False	NA	NA	NA	85465159	85282949	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_85282978_85318486_85321569_85324739_85324884_85350414_85350535_85351505_85351580_85358747_85358848_85464742
H1_mix_00006984	chr1	-	2141	16	NIC	ENSG00000122417.15	novel	2155	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_10	23.0404475265178	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTCTAAGTAGTAGATT	18	True	NA	-10	True	AATAAA	-13	NA	86396283	86348736	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_86348879_86352858_86352985_86354529_86354693_86354773_86354860_86356443_86356603_86358786_86358892_86360425_86360537_86371017_86371154_86372430_86372541_86376232_86376419_86382930_86383003_86383133_86383197_86384675_86384802_86385457_86385591_86386914_86387087_86396032
H1_mix_00006985	chr1	-	5627	17	NIC	ENSG00000122417.15	novel	4376	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	21.5137129233891	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCTCTAAGTAGTAGAT	-22	True	NA	-11	True	AATAAA	-12	NA	86396323	86348737	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_86352209_86352858_86352985_86354529_86354693_86354773_86354860_86356443_86356603_86358786_86358892_86360425_86360537_86371017_86371154_86372430_86372541_86376232_86376419_86382241_86382359_86382930_86383003_86383133_86383197_86384675_86384802_86385457_86385591_86386914_86387087_86396032
H1_mix_00006986	chr1	-	2156	16	FSM	ENSG00000122417.15	ENST00000370566.7	2155	16	0	-1	0	0	multi-exon	FALSE	canonical	3	21	junction_4	24.406738595906	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTCTAAGTAGTAGATT	NA	False	NA	-10	True	AATAAA	-13	NA	86396340	86348736	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_86348879_86352858_86352985_86354529_86354693_86354773_86354860_86358786_86358892_86360425_86360537_86371017_86371154_86372430_86372541_86376232_86376419_86382241_86382359_86382930_86383003_86383133_86383197_86384675_86384802_86385457_86385591_86386914_86387087_86396032
H1_mix_00006990	chr1	-	1153	1	FSM	ENSG00000261737.1	ENST00000565575.1	961	1	-99	-93	-99	93	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGTCTCTACAAAAGGATCA	947	False	NA	NA	False	TTTAAA	-27	NA	86704561	86703408	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_86703400_86704600
H1_mix_00006992	chr1	-	727	6	FSM	ENSG00000183291.18	ENST00000401030.4	727	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	577.190990920683	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCTTAACAAAACCCATTT	-2	True	NA	NA	False	ATTAAA	-43	NA	86914126	86863300	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_86863606_86868052_86868103_86880661_86880726_86887155_86887197_86903280_86903449_86914027
H1_mix_00006994	chr1	-	501	3	FSM	ENSG00000137947.12	ENST00000471471.1	516	3	15	0	15	0	multi-exon	FALSE	canonical	3	13	junction_2	71.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGTTGGAGATTCTCAGAA	602	False	NA	NA	False	NA	NA	NA	88891929	88864043	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_88864115_88887260_88887368_88891606
H1_mix_00006995	chr1	-	224	2	Genic_Genomic	ENSG00000272931.1	novel	695	1	NA	NA	481	63767	multi-exon	FALSE	non_canonical	0	0	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTTCCTCTGAAGAGCC	1403	False	NA	NA	False	NA	NA	NA	89820387	89756406	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_-_89756423_89820179
H1_mix_00006996	chr1	-	1686	1	FSM	ENSG00000228175.3	ENST00000380526.2	729	1	-658	-299	-658	299	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAATTCTA	4	True	NA	NA	False	ATTAAA	-13	NA	89994979	89993293	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_89993300_89995000
H1_mix_00006998	chr1	-	429	2	FSM	ENSG00000233593.11	ENST00000670028.1	717	2	0	288	0	-288	multi-exon	FALSE	canonical	2	4	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGCCCCTCCATTGCAGAG	15	True	NA	NA	False	NA	NA	NA	90851620	90837474	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_90837766_90851482
H1_mix_00006999	chr1	-	4462	7	NNC	ENSG00000122482.22	novel	5541	6	NA	NA	-48	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_3	86.466595990719	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCTTTTAAATAGCCAGT	NA	False	NA	NA	False	NA	NA	NA	91022320	90916790	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_90916991_90918051_90918155_90935407_90935531_90937484_90938091_90938271_90941310_90982309_90982371_91021989
H1_mix_00007001	chr1	-	710	2	FSM	ENSG00000122482.22	ENST00000482467.1	710	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAGCATAAAGCTTGATT	563	False	NA	NA	False	NA	NA	NA	91021725	91020528	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_91021202_91021688
H1_mix_00007002	chr1	-	672	4	FSM	ENSG00000162669.16	ENST00000427444.1	672	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	2.35702260395516	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTTTTCAGTTGCTTTC	-15	True	NA	NA	False	NA	NA	NA	91404840	91385613	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_91385835_91394092_91394403_91401011_91401110_91404797
H1_mix_00007003	chr1	-	1863	18	NIC	ENSG00000174842.17	novel	2006	19	NA	NA	12	-5	combination_of_known_splicesites	FALSE	canonical	2	4	junction_16	93.6544114760609	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATCAATTTCTATAATG	5	True	NA	-13	True	AATAAA	-14	NA	92298975	92246406	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_92246647_92247061_92247145_92247877_92247990_92262862_92262927_92263622_92263733_92264553_92264639_92266418_92266493_92266699_92266742_92267912_92268003_92268104_92268136_92269722_92269777_92271464_92271653_92286489_92286593_92288913_92289152_92290197_92290307_92291417_92291538_92297960_92298030_92298924
H1_mix_00007004	chr1	-	2005	19	NNC	ENSG00000174842.17	novel	2006	19	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_6	139.144664483842	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATCAATTTCTATAATG	-7	True	NA	-13	True	AATAAA	-14	NA	92298987	92246406	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_92246647_92247061_92247145_92247877_92247990_92262862_92262927_92263622_92263733_92264553_92264639_92266539_92266594_92266699_92266742_92267912_92268003_92268104_92268136_92269722_92269777_92271464_92271653_92286489_92286593_92288913_92289152_92290197_92290331_92291417_92291538_92297403_92297530_92297960_92298030_92298924
H1_mix_00007005	chr1	-	1865	18	NIC	ENSG00000174842.17	novel	2006	19	NA	NA	0	-9	combination_of_known_junctions	FALSE	canonical	3	51	junction_7	84.1154668578014	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATAGTACTTTCCATTA	-7	True	NA	-30	True	AATAAA	-9	NA	92298987	92246500	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_92246647_92247061_92247145_92247877_92247990_92262862_92262927_92263622_92263733_92264553_92264639_92266418_92266493_92267912_92268003_92268104_92268136_92269722_92269777_92271464_92271653_92286489_92286593_92288913_92289152_92290197_92290307_92291417_92291538_92297403_92297530_92297960_92298030_92298924
H1_mix_00007008	chr1	-	361	1	FSM	ENSG00000229567.1	ENST00000423010.1	169	1	38	-230	38	230	mono-exon	FALSE	NA	NA	NA	NA	NA	257	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATTTTAACAATGATTTT	NA	False	NA	NA	False	ATTAAA	-35	NA	93279091	93278730	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_93278700_93279100
H1_mix_00007009	chr1	-	1808	5	FSM	ENSG00000223745.8	ENST00000669506.1	1808	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.7270979012358	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTATCCCATCTTAAAA	729	False	NA	NA	False	ATTAAA	-41	NA	93345859	93310200	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_93311609_93339356_93339537_93339648_93339680_93340457_93340511_93345723
H1_mix_00007013	chr1	-	622	2	FSM	ENSG00000067334.14	ENST00000462746.6	480	2	-142	0	-142	0	multi-exon	FALSE	canonical	3	784	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCATCATCTAAATTAATT	8066	False	NA	-3	True	ATTAAA	-18	NA	93871139	93869779	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_93869945_93870682
H1_mix_00007014	chr1	-	1556	3	ISM	ENSG00000117525.14	ENST00000370207.4	1879	5	5487	96	14	-96	3prime_fragment	FALSE	canonical	3	15	junction_1	19	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTATTTATGTAGGTAAT	5606	False	NA	-116	True	AAAAAG	-18	NA	94536150	94529405	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_94530597_94533089_94533269_94535964
H1_mix_00007015	chr1	-	3413	6	FSM	ENSG00000224081.10	ENST00000634870.1	5956	6	0	2543	0	-4	multi-exon	FALSE	canonical	1	1	junction_2	3.18747549010185	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTTTTTACTTCTTT	NA	False	NA	NA	False	AATAAA	-13	NA	94820277	94616356	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_94617072_94622718_94624610_94638436_94638559_94679424_94679608_94732257_94732438_94819955
H1_mix_00007016	chr1	-	2016	8	NNC	ENSG00000117519.16	novel	1991	7	NA	NA	0	56666	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1410.43313654106	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGAAAAAGAAAAGAA	3	True	NA	NA	False	AAAAAG	-1	NA	94927110	94840282	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_94840308_94896956_94898084_94899370_94899518_94901668_94901786_94902120_94902259_94903121_94903189_94903402_94903525_94926837
H1_mix_00007019	chr1	-	5297	3	ISM	ENSG00000156869.14	ENST00000646001.2	6971	17	55746	0	1619	0	3prime_fragment	FALSE	canonical	1	1	junction_1	0.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGACTATTGTATTAATATGA	NA	False	NA	-4	True	AATAAA	-18	NA	99710889	99703969	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_99709121_99709197_99709260_99710805
H1_mix_00007020	chr1	-	5851	3	ISM	ENSG00000156876.10	ENST00000287482.6	3848	17	40904	-3	40904	3	3prime_fragment	FALSE	canonical	3	80	junction_2	2	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGAAAATCAAGTACTTCA	NA	False	NA	-32	True	AATAAA	-21	NA	100092026	100083566	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_100085435_100085535_100085631_100088138
H1_mix_00007022	chr1	-	7677	2	FSM	ENSG00000224616.4	ENST00000670421.2	7697	2	16	4	0	-4	multi-exon	FALSE	canonical	3	18	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAGTATAACAATAATAA	13	True	NA	NA	False	NA	NA	NA	100266120	100258357	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_100265918_100266003
H1_mix_00007025	chr1	-	1034	8	FSM	ENSG00000117543.22	ENST00000488176.1	1034	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_7	89.9378470196536	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGTTTGGATGTATCCC	16	True	NA	NA	False	NA	NA	NA	101025767	100990357	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_100990632_100992636_100992741_100995109_100995150_101001466_101001588_101013709_101013819_101021640_101021766_101025308_101025467_101025664
H1_mix_00007026	chr1	-	2740	6	FSM	ENSG00000118733.17	ENST00000370103.9	3165	6	0	425	0	-425	multi-exon	FALSE	canonical	0	0	junction_5	1.72046505340853	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAATAATGTAACCAAAA	2	True	NA	NA	False	AAAACA	-44	NA	101996926	101802984	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_101804916_101806075_101806183_101825025_101825246_101830671_101830828_101836878_101837026_101996747
H1_mix_00007027	chr1	-	3105	24	FSM	ENSG00000060718.22	ENST00000644186.1	3151	24	0	46	0	-46	multi-exon	FALSE	canonical	3	44	junction_8	6.52521646426247	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATTAATTAAAAAAAACTAA	5	True	NA	NA	False	NA	NA	NA	103108522	103001305	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_103001970_103002427_103002482_103002746_103002792_103003214_103003269_103004443_103004489_103004607_103004662_103005837_103005892_103006067_103006122_103006261_103006316_103008462_103008517_103012412_103012470_103014510_103014595_103015667_103015743_103017819_103017883_103018817_103018860_103021706_103021770_103022741_103022997_103025520_103025614_103026215_103026333_103031115_103031245_103074617_103074781_103078657_103078872_103082804_103082973_103108072
H1_mix_00007029	chr1	-	3918	11	NNC	ENSG00000085491.17	novel	4249	10	NA	NA	82	21098	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	110.142816379463	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCAACTGCTAACAAGTG	98	False	NA	NA	False	NA	NA	NA	108200767	108112944	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_108112971_108134823_108136838_108139057_108139209_108143542_108143711_108148278_108148387_108154982_108155136_108157461_108157621_108161181_108161294_108181940_108182029_108185827_108185955_108199955
H1_mix_00007031	chr1	-	441	4	FSM	ENSG00000162641.20	ENST00000603450.1	599	4	158	0	158	0	multi-exon	FALSE	canonical	1	1	junction_1	0.471404520791032	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCCCTGGCCTCTCCATT	NA	False	NA	NA	False	NA	NA	NA	108830576	108823275	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_108823478_108823565_108823689_108827204_108827303_108830558
H1_mix_00007033	chr1	-	2487	13	FSM	ENSG00000121940.17	ENST00000675654.1	2494	13	7	0	2	0	multi-exon	FALSE	canonical	2	3	junction_11	49.1559310313166	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCATGAGCCATTGTGCCC	-37	True	NA	NA	False	NA	NA	NA	108963497	108932014	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_108932502_108934624_108934943_108937076_108937419_108939635_108939783_108940044_108940143_108941404_108941499_108943474_108943616_108943835_108944058_108947610_108947719_108949819_108949922_108950308_108950439_108962308_108962470_108963360
H1_mix_00007037	chr1	-	6688	20	NNC	ENSG00000134243.12	novel	6993	20	NA	NA	0	87558	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	131.002400011848	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATATATATATATAT	NA	False	NA	NA	False	NA	NA	NA	109369589	109222009	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_109222046_109309577_109314058_109314260_109314385_109314671_109314779_109316849_109316959_109317852_109317970_109322931_109323122_109324898_109325090_109326991_109327161_109327498_109327602_109336239_109336347_109340723_109340880_109342013_109342159_109345750_109345879_109347482_109347533_109350928_109351003_109354366_109354532_109355366_109355470_109367407_109367482_109369529
H1_mix_00007038	chr1	-	1880	5	FSM	ENSG00000134222.16	ENST00000492431.1	1870	5	0	-10	0	0	multi-exon	FALSE	canonical	3	207	junction_3	98.6493157604248	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTGGAAGTCGATCCTG	735	False	NA	-12	True	AATAAA	-26	NA	109282419	109279556	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618
H1_mix_00007039	chr1	-	2004	7	ISM	ENSG00000134222.16	ENST00000409267.5	1730	8	22	0	12	0	intron_retention	FALSE	canonical	3	207	junction_3	83.7789750872298	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGGAAGTCGATCCTGC	7	True	NA	-11	True	AATAAA	-27	NA	109283103	109279555	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618_109282061_109282517_109282576_109282679
H1_mix_00007040	chr1	-	1759	8	NIC	ENSG00000134222.16	novel	1742	8	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_7	142.465749553773	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTGGAAGTCGATCCTG	22	True	NA	-12	True	AATAAA	-26	NA	109283132	109279556	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618_109282061_109282517_109282576_109282679_109282790_109283062
H1_mix_00007042	chr1	-	1827	7	FSM	ENSG00000134222.16	ENST00000409138.6	1826	7	7	-8	7	0	multi-exon	FALSE	canonical	3	41	junction_6	142.21511483977	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTGGAAGTCGATCCTG	-25	True	NA	-12	True	AATAAA	-26	NA	109283179	109279556	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_109280157_109280395_109280490_109280776_109281252_109281618_109282061_109282517_109282576_109282679_109282732_109283073
H1_mix_00007047	chr1	-	1379	4	FSM	ENSG00000143106.13	ENST00000484563.1	1503	4	0	124	0	-124	multi-exon	FALSE	canonical	3	1864	junction_3	281.484556513418	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTGATACTTCTGTC	5	True	NA	NA	False	NA	NA	NA	109426427	109412076	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_109413136_109415236_109415364_109421859_109421927_109426301
H1_mix_00007049	chr1	-	366	2	NNC	ENSG00000227963.2	novel	2611	4	NA	NA	20264	-23251	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	0	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTCTGAAATGAGGATAA	NA	False	NA	NA	False	AATACA	-11	NA	110318889	110315510	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_110315752_110318764
H1_mix_00007050	chr1	-	2560	9	FSM	ENSG00000168679.18	ENST00000369779.9	2567	9	4	3	0	0	multi-exon	TRUE	canonical	0	0	junction_1	2.43669858620224	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTTTAAAAACTTCTTTA	-9	True	NA	NA	False	AATAAA	-14	NA	110391022	110362859	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_110363894_110375457_110375552_110376949_110377162_110378852_110379357_110380981_110381144_110381651_110381796_110382833_110382967_110389236_110389356_110390864
H1_mix_00007051	chr1	-	616	5	NNC	ENSG00000134248.14	novel	620	4	NA	NA	0	17443	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	969.056886875069	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCTTTTAACAGCCCTTT	6	True	NA	NA	False	NA	NA	NA	110407664	110383805	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_110383832_110401252_110401584_110403918_110404037_110406317_110406380_110407585
H1_mix_00007052	chr1	-	3220	1	FSM	ENSG00000259834.1	ENST00000566942.1	3481	1	254	7	254	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATCCTGTTGCGCAT	NA	False	NA	NA	False	AATAAA	-7	NA	110656786	110653566	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_110653600_110656800
H1_mix_00007053	chr1	-	1760	3	NNC	ENSG00000121931.16	novel	3313	4	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	21.5	37	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCTGTCTGGTTAATC	13	True	NA	-16	True	NA	NA	NA	110963900	110947189	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_110948397_110949850_110950124_110963620
H1_mix_00007055	chr1	-	870	6	FSM	ENSG00000156171.15	ENST00000490780.5	769	6	-104	3	9	-3	multi-exon	FALSE	canonical	3	14	junction_1	94.0816666519041	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCTTTTGGGTTTTTTGC	6	True	NA	NA	False	AATAAA	-22	NA	111140194	111125380	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_111125651_111126226_111126295_111131423_111131569_111137522_111137587_111139500_111139667_111140037
H1_mix_00007056	chr1	-	2008	1	FSM	ENSG00000260948.1	ENST00000564771.1	2023	1	10	5	10	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	190	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTTCTTTGCGTACTT	NA	False	NA	NA	False	AATAAA	-12	NA	111433058	111431050	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_111431000_111433100
H1_mix_00007057	chr1	-	723	2	FSM	ENSG00000243960.1	ENST00000416099.1	723	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	547	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTACTGGTTCACAATC	8063	False	NA	-3	True	AATAAA	-15	NA	111441228	111438639	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_111438826_111440691
H1_mix_00007058	chr1	-	1737	11	NIC	ENSG00000116455.14	novel	2456	10	NA	NA	11	524	combination_of_known_junctions	FALSE	canonical	3	78	junction_1	256.528380496194	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGGACTTGGTACGGTT	0	True	NA	-59	True	NA	NA	NA	111449245	111440703	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_111441390_111441498_111441605_111442024_111442094_111442652_111442762_111443322_111443395_111443866_111443922_111444053_111444125_111447094_111447145_111447434_111447577_111448618_111448805_111449054
H1_mix_00007060	chr1	-	4210	14	FSM	ENSG00000007341.19	ENST00000360743.8	4206	14	0	-4	0	0	multi-exon	FALSE	canonical	3	14	junction_2	32.7005419494384	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTGTCTATTTGTGTAAT	506	False	NA	NA	False	AATAAA	-31	NA	112619189	112523513	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_112526112_112541950_112542091_112555867_112556019_112576985_112577089_112578344_112578418_112581991_112582107_112582374_112582473_112583971_112584127_112591524_112591604_112597970_112598087_112600793_112600849_112610840_112611004_112616812_112616896_112618908
H1_mix_00007063	chr1	-	752	2	FSM	ENSG00000007341.19	ENST00000470683.1	752	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGTTTGTGATATTTTGT	18	True	NA	0	True	AATAAA	-21	NA	112619111	112610454	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_112611004_112618908
H1_mix_00007066	chr1	-	1026	6	FSM	ENSG00000155366.17	ENST00000369632.6	1026	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	317.058101930861	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCCCCTCCCTTCACAG	8396	False	NA	NA	False	GGGGCT	-35	NA	112707079	112701519	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_112701714_112702562_112702694_112702998_112703120_112703643_112703807_112705099_112705169_112706731
H1_mix_00007067	chr1	-	472	2	FSM	ENSG00000155366.17	ENST00000527563.1	579	2	0	107	0	-107	multi-exon	FALSE	canonical	3	105	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCGAGCTGTGGGCATT	-1	True	NA	NA	False	NA	NA	NA	112707127	112704746	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_112705169_112707077
H1_mix_00007068	chr1	-	2623	10	NIC	ENSG00000155367.16	novel	2474	11	NA	NA	0	-5	intron_retention	FALSE	canonical	3	44	junction_9	62.726921386807	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGGTGTGTGTCTGTAT	-19	True	NA	NA	False	AATAAA	-9	NA	112715328	112710002	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_112710311_112710459_112710612_112710743_112710852_112711007_112711072_112711265_112711385_112711970_112712056_112712344_112712458_112712743_112713032_112713496_112713612_112714057
H1_mix_00007069	chr1	-	1617	11	NNC	ENSG00000155367.16	novel	1714	10	NA	NA	94	-7	intron_retention	FALSE	canonical	3	4	junction_10	87.2447133068818	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATAAAGGTGTGTGTCTGT	314	False	NA	NA	False	AATAAA	-7	NA	112715161	112710004	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_112710311_112710459_112710612_112710743_112710852_112711007_112711072_112711265_112711385_112711970_112712056_112712344_112712458_112712743_112713032_112713496_112713612_112714057_112714139_112714975
H1_mix_00007070	chr1	-	779	4	FSM	ENSG00000215866.9	ENST00000433505.5	767	4	0	-12	0	12	multi-exon	FALSE	canonical	2	4	junction_3	1454.33635113141	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTCACACGGCGAGTGA	4248	False	NA	-7	True	AATAAA	-35	NA	112849815	112820157	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_112820539_112823652_112823755_112825512_112825673_112849679
H1_mix_00007072	chr1	-	3265	6	NNC	ENSG00000155380.13	novel	3849	6	NA	NA	0	39818	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	603.101848778463	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACTAGGAAGAGATAAAGAA	158	False	NA	NA	False	AAAAAG	-4	NA	112956181	112872028	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_112872063_112912353_112914166_112917177_112918045_112921989_112922134_112929091_112929353_112956034
H1_mix_00007073	chr1	-	3858	6	FSM	ENSG00000155380.13	ENST00000458229.6	3849	6	0	-9	0	0	multi-exon	FALSE	canonical	1	1	junction_5	729.767798686678	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTTTTCCTCATCTTTA	-3	True	NA	-14	True	AATAAA	-18	NA	112956198	112911846	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_112914166_112917177_112918045_112921989_112922134_112929091_112929353_112955275_112955379_112956034
H1_mix_00007074	chr1	-	6602	12	NIC	ENSG00000116793.16	novel	4314	12	NA	NA	-454	1390	combination_of_known_junctions	FALSE	canonical	3	82	junction_2	70.9781714786052	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCACTGCTCTTATTTA	NA	False	NA	NA	False	NA	NA	NA	113715666	113695440	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_113697726_113698261_113698388_113699703_113700244_113700793_113700950_113704080_113704168_113704665_113704798_113705889_113706163_113706593_113706723_113710253_113710476_113711745_113711836_113711939_113712114_113713278
H1_mix_00007075	chr1	-	3244	18	FSM	ENSG00000116793.16	ENST00000393357.6	3244	18	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	65.7810671008561	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTCTAGGTTTTCTTTGT	-2	True	NA	0	True	AATAAA	-22	NA	113759155	113697201	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_113697726_113698261_113698388_113699703_113699800_113700793_113700950_113704080_113704168_113704665_113704798_113705889_113706163_113706593_113706723_113710253_113710476_113711745_113711836_113711939_113712114_113713278_113713439_113724758_113724894_113726417_113726575_113738109_113738269_113738729_113738800_113757698_113757756_113758658
H1_mix_00007077	chr1	-	748	1	FSM	ENSG00000232450.1	ENST00000413412.1	748	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGTGGTTTTATACCAG	2194	False	NA	NA	False	NA	NA	NA	113699631	113698883	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_113698900_113699600
H1_mix_00007078	chr1	-	2877	17	NIC	ENSG00000116793.16	novel	2747	15	NA	NA	0	-150	combination_of_known_junctions	FALSE	canonical	3	50	junction_16	62.9522388402509	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTCATCATTAATTTTT	19	True	NA	-1	True	ATTAAA	-26	NA	113759489	113700024	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_113700244_113700793_113700950_113704080_113704168_113704665_113704798_113705889_113706163_113706593_113706723_113710253_113710476_113711745_113711836_113711939_113712114_113713278_113713439_113724758_113724894_113726417_113726575_113738109_113738269_113738729_113738800_113757698_113757756_113758658_113758849_113759022
H1_mix_00007079	chr1	-	2750	15	FSM	ENSG00000116793.16	ENST00000357783.6	2747	15	0	-3	0	3	multi-exon	FALSE	canonical	3	50	junction_14	62.7684845528488	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATTTTCTGACTACATTA	32	True	NA	-3	True	AATAAA	-24	NA	113759476	113703819	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_113704168_113704665_113704798_113705889_113706163_113706593_113706723_113710253_113710476_113711745_113711836_113711939_113712114_113713278_113713439_113724758_113724894_113726417_113726575_113738109_113738269_113738729_113738800_113757698_113757756_113758658_113758849_113759022
H1_mix_00007080	chr1	-	2395	13	ISM	ENSG00000116793.16	ENST00000357783.6	2747	15	0	1942	0	0	5prime_fragment	FALSE	canonical	3	50	junction_12	67.6405429868474	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGATATTTGTGGATTT	32	True	NA	-8	True	AATAAA	-16	NA	113759476	113705764	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_113706163_113706593_113706723_113710253_113710476_113711745_113711836_113711939_113712114_113713278_113713439_113724758_113724894_113726417_113726575_113738109_113738269_113738729_113738800_113757698_113757756_113758658_113758849_113759022
H1_mix_00007082	chr1	-	3700	4	NIC	ENSG00000116793.16	novel	956	3	NA	NA	0	2931	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	76.916982664573	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGAAATTTAGAGTCAGAT	32	True	NA	NA	False	NA	NA	NA	113759476	113746590	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_113749590_113757698_113757756_113758658_113758849_113759022
H1_mix_00007091	chr1	-	5284	3	ISM	ENSG00000197323.12	ENST00000448034.5	2706	18	63627	-4827	0	9	3prime_fragment	FALSE	canonical	3	152	junction_2	19	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTTCTTTTTTTCTTCT	5819	False	NA	-22	True	ATTAAA	-26	NA	114399609	114392780	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_114397861_114397939_114397991_114399456
H1_mix_00007092	chr1	-	7410	16	ISM	ENSG00000197323.12	ENST00000369543.6	3457	19	47924	-4827	0	9	3prime_fragment	FALSE	canonical	3	79	junction_1	39.3945286669214	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTTCTTTTTTTCTTCT	261	False	NA	-22	True	ATTAAA	-26	NA	114463236	114392780	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_114397861_114399456_114399610_114401388_114401464_114402759_114402884_114405409_114405760_114406940_114407101_114408676_114408741_114410183_114410317_114421435_114421637_114424590_114424756_114425448_114425724_114427176_114427295_114427747_114427895_114430797_114430913_114433616_114433734_114463103
H1_mix_00007094	chr1	-	7104	21	NIC	ENSG00000197323.12	novel	8369	20	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	50.5415423191655	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATGAATTTCTTTTTTT	36	False	NA	-27	True	ATTAAA	-21	NA	114511160	114392785	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_114396506_114397731_114397861_114397939_114397991_114399456_114399610_114401388_114401464_114402759_114402884_114405409_114405760_114406940_114407101_114408676_114408741_114410183_114410317_114421435_114421637_114424590_114424756_114425448_114425724_114427176_114427295_114427747_114427895_114430797_114430913_114433616_114433734_114463103_114463237_114463411_114463557_114464269_114464389_114510550
H1_mix_00007095	chr1	-	1300	8	NNC	ENSG00000116752.6	novel	1275	7	NA	NA	0	14810	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	266.565839782174	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGTAACTATTACCAAAAAA	0	True	NA	NA	False	NA	NA	NA	114581615	114552746	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_114552772_114567556_114568257_114569991_114570073_114570699_114570751_114575589_114575752_114576687_114576759_114581298_114581392_114581498
H1_mix_00007096	chr1	-	6174	21	FSM	ENSG00000175984.15	ENST00000393274.6	6177	21	0	3	0	-2	multi-exon	FALSE	canonical	1	1	junction_19	8.96256101792339	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGATCCCTTGGAGAATTC	-10	True	NA	-15	True	AATAAA	-15	NA	114670049	114582852	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_114585632_114587386_114587474_114587715_114587953_114594472_114594579_114595831_114595874_114599273_114599452_114600203_114600353_114600819_114600961_114601507_114601586_114602124_114602195_114604921_114605032_114608685_114608874_114611072_114611118_114618385_114618483_114621894_114622066_114622986_114623100_114623506_114623644_114625178_114626189_114645447_114645560_114654504_114654762_114669982
H1_mix_00007098	chr1	-	455	3	FSM	ENSG00000052723.12	ENST00000369524.5	455	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	166	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGAATTCCAGTCAATAT	473	False	NA	-35	True	ATTAAA	-16	NA	114780190	114774141	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_114774373_114779141_114779285_114780109
H1_mix_00007103	chr1	-	7571	1	FSM	ENSG00000177551.5	ENST00000369506.1	7226	1	-39	-306	-39	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATAAAGTCCTCTCTTT	NA	False	NA	-32	True	AATAAA	-5	NA	115843956	115836385	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_115836400_115844000
H1_mix_00007104	chr1	-	1448	1	FSM	ENSG00000177173.5	ENST00000319092.5	1157	1	-68	-223	-68	223	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACCCTCTGCAGCCTTGG	NA	False	NA	NA	False	NA	NA	NA	116534160	116532712	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_116532700_116534200
H1_mix_00007105	chr1	-	1003	1	FSM	ENSG00000231072.1	ENST00000419696.1	1003	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCCCAGACCACCAGCCC	NA	False	NA	NA	False	NA	NA	NA	116714835	116713832	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_116713800_116714800
H1_mix_00007106	chr1	-	575	1	FSM	ENSG00000272715.1	ENST00000610171.1	383	1	-339	147	-339	-147	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCACAAAGACACCCATTTA	NA	False	NA	NA	False	NA	NA	NA	116909870	116909295	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_116909300_116909900
H1_mix_00007111	chr1	-	236	2	NNC	ENSG00000223804.5	novel	715	3	NA	NA	-5	8558	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTTGTAGCCTCTTTAT	1156	False	NA	NA	False	NA	NA	NA	120341844	120258775	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_120258884_120341716
H1_mix_00007112	chr1	-	2827	12	ISM	ENSG00000275131.3	ENST00000612480.2	6897	42	195301	-1011	30351	1011	3prime_fragment	FALSE	canonical	3	10	junction_6	4.99917348540637	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCACTGCTTTGTTTCCCA	NA	False	NA	-8	True	AATAAA	-10	NA	120505988	120488848	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_120489917_120491581_120491629_120491934_120492074_120493157_120493302_120494233_120494461_120495029_120495147_120497181_120497422_120501109_120501235_120501927_120502118_120503599_120503720_120504381_120504514_120505710
H1_mix_00007113	chr1	-	2072	10	NIC	ENSG00000275131.3	novel	3404	11	NA	NA	5162	35	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	36.5969033298356	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTATTGGCCCCTTTCAC	NA	False	NA	NA	False	NA	NA	NA	120543195	120519432	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_120519822_120520233_120520670_120523893_120524127_120530295_120530385_120531877_120532090_120536310_120536403_120538322_120538405_120538570_120538736_120541891_120542087_120543016
H1_mix_00007115	chr1	-	1088	1	FSM	ENSG00000281741.2	ENST00000626088.1	1088	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGACCGCCCAGCTGCTG	NA	False	NA	NA	False	NA	NA	NA	120914238	120913150	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_120913200_120914200
H1_mix_00007116	chr1	-	471	1	FSM	ENSG00000272583.1	ENST00000609485.1	464	1	-5	-2	-5	2	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTCCTCTCCCTTTAT	726	False	NA	NA	False	ATTAAA	-27	NA	121518834	121518363	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_121518400_121518800
H1_mix_00007121	chr1	-	362	1	FSM	ENSG00000275291.1	ENST00000618578.1	162	1	13	-213	13	213	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCTCACTTATGTAAGAT	NA	False	NA	NA	False	NA	NA	NA	144524008	144523646	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_144523600_144524000
H1_mix_00007122	chr1	-	243	1	FSM	ENSG00000278099.1	ENST00000617626.1	165	1	13	-91	13	91	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTGTTACAGTCAGAAGC	1	True	NA	NA	False	NA	NA	NA	144551930	144551687	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_144551700_144551900
H1_mix_00007123	chr1	-	7012	13	NNC	ENSG00000196369.12	novel	4971	11	NA	NA	5	40708	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	91.4661443133773	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTAACTTTTTTTTTTT	NA	False	NA	NA	False	AAAACA	-7	NA	145095324	144846556	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_144846588_144873336_144873364_144887287_144892382_144893407_144893510_144897115_144897338_144905090_144905220_144905858_144906075_144914691_144914755_144955438_144955602_144960337_144960399_144995007_144995201_145092834_145093444_145095222
H1_mix_00007124	chr1	-	7107	11	NIC	ENSG00000196369.12	novel	4971	11	NA	NA	5	130	combination_of_known_junctions	FALSE	canonical	3	13	junction_8	83.9440289716904	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAAATTGTATACACTAT	NA	False	NA	NA	False	AATAAA	-27	NA	145095324	144887134	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_144892382_144893407_144893510_144897115_144897338_144905090_144905220_144905858_144906075_144914691_144914755_144955438_144955602_144960337_144960399_144995007_144995201_145092834_145093444_145095222
H1_mix_00007125	chr1	-	935	2	NIC	ENSG00000272419.6	novel	1015	3	NA	NA	25	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTGTGTGATTTTTCAG	904	False	NA	NA	False	AATAAA	-19	NA	145216033	145164098	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_145164639_145215638
H1_mix_00007126	chr1	-	277	3	FSM	ENSG00000272419.6	ENST00000418192.2	277	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	10	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAGAACAACCTGAAGTT	1191	False	NA	NA	False	AATAAA	-38	NA	145215746	145201187	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_145201302_145214676_145214732_145215638
H1_mix_00007127	chr1	-	455	3	NIC	ENSG00000162825.17	novel	18760	138	NA	NA	96319	-9648	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTACCTTACTGTGAAG	NA	False	NA	NA	False	NA	NA	NA	145309248	145299547	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_145299721_145305069_145305179_145309075
H1_mix_00007129	chr1	-	4979	2	NNC	ENSG00000162825.17	novel	18760	138	NA	NA	-12075	-115580	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	0	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTTGAACCTTGTTTTTG	8666	False	NA	NA	False	NA	NA	NA	145417642	145405479	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_145405565_145412748
H1_mix_00007130	chr1	-	1343	3	ISM	ENSG00000272150.5	ENST00000606775.2	2019	15	15293	-866	15293	-754	3prime_fragment	FALSE	canonical	0	0	junction_2	2	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGAAGAGATATTTTGGG	NA	False	NA	NA	False	NA	NA	NA	145575767	145573098	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_145574209_145574820_145574933_145575646
H1_mix_00007131	chr1	-	383	3	ISM	ENSG00000272150.5	ENST00000606775.2	2019	15	12101	3275	12101	-3275	internal_fragment	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTCTTGACATGGACAG	NA	False	NA	NA	False	NA	NA	NA	145578959	145577239	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_145577394_145578011_145578064_145578782
H1_mix_00007135	chr1	-	4254	4	FSM	ENSG00000131788.16	ENST00000472114.5	2386	4	-1867	-1	1443	1	multi-exon	FALSE	canonical	3	316	junction_3	22.365648262955	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGTCATGGAGATGGG	6635	False	NA	-4	True	AATAAA	-16	NA	145853221	145848520	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_145850270_145850452_145850587_145850770_145850940_145851019
H1_mix_00007138	chr1	-	734	7	NNC	ENSG00000265241.8	novel	4909	6	NA	NA	0	13796	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1052.36442779528	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTTGACCTTTTCAGAC	1	True	NA	NA	False	NA	NA	NA	145927447	145907759	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_145907789_145925722_145925928_145926040_145926178_145926481_145926619_145926808_145926887_145927017_145927078_145927359
H1_mix_00007139	chr1	-	764	3	FSM	ENSG00000265241.8	ENST00000498663.5	764	3	0	0	0	0	multi-exon	FALSE	canonical	3	2877	junction_2	61	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCCCAGGCTGCTATGG	-4	True	NA	NA	False	NA	NA	NA	145927495	145926145	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_145926178_145926481_145927078_145927359
H1_mix_00007140	chr1	-	595	1	FSM	ENSG00000287190.1	ENST00000659152.1	1804	1	186	1023	186	-1023	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAATAAAAATACAAAAAAAA	185	False	NA	NA	False	NA	NA	NA	146052058	146051463	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_146051500_146052100
H1_mix_00007144	chr1	-	4452	9	FSM	ENSG00000131781.13	ENST00000254090.9	2331	9	-85	-2036	-71	80	multi-exon	FALSE	canonical	2	15	junction_3	6.12244844812923	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTATTATTATTTTTTG	193	False	NA	-12	True	AATAAA	-13	NA	147225424	147184224	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_147187246_147190176_147190250_147201151_147201505_147208851_147209052_147212392_147212536_147213307_147213471_147215753_147215943_147224894_147225067_147225286
H1_mix_00007145	chr1	-	2308	9	NNC	ENSG00000131781.13	novel	2331	9	NA	NA	13	-5	at_least_one_novel_splicesite	TRUE	canonical	2	9	junction_8	7.90470587688119	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAACTTTCTAGGCTCACA	25	True	NA	-10	True	AATAAA	-10	NA	147225326	147186265	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_147187246_147190176_147190250_147201151_147201505_147208851_147209052_147212392_147212536_147213307_147213471_147215753_147215943_147224894_147225062_147225286
H1_mix_00007147	chr1	-	1258	8	FSM	ENSG00000162836.12	ENST00000487562.5	1258	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	29.025674771112	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTAGTTTGAACCACTT	8683	False	NA	NA	False	GATAAA	-13	NA	147670048	147649816	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_147650239_147652591_147652648_147654193_147654327_147655160_147655249_147658959_147659040_147659395_147659527_147659646_147659776_147669829
H1_mix_00007148	chr1	-	767	2	ISM	ENSG00000215859.9	ENST00000425209.1	1350	7	12563	1326	12563	-1326	internal_fragment	FALSE	canonical	3	90	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCATGACTCGCACATGG	NA	False	NA	NA	False	NA	NA	NA	147997029	147995626	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_147995887_147996522
H1_mix_00007151	chr1	-	4069	13	ISM	ENSG00000263956.8	ENST00000614015.4	4630	21	8685	104	8685	0	3prime_fragment	FALSE	canonical	2	16	junction_7	14.0324524664159	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGACTTTTGGATTGTT	NA	False	NA	-6	True	ATTAAA	-16	NA	148118603	148102150	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_148103913_148104536_148104646_148105359_148105529_148106180_148106233_148106941_148107115_148107710_148107763_148108481_148108655_148109283_148109336_148110377_148110542_148114436_148114489_148115792_148115999_148116462_148116536_148117571
H1_mix_00007154	chr1	-	400	1	FSM	ENSG00000202408.2	ENST00000365538.2	156	1	-167	-77	-167	77	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTGGCATGTTAAGTG	NA	False	NA	NA	False	NA	NA	NA	148334934	148334534	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_148334500_148334900
H1_mix_00007155	chr1	-	3615	14	NIC	ENSG00000270629.7	novel	10779	71	NA	NA	-282	-113	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	13.9678413405929	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTATCACTCTGGACTTTT	NA	False	NA	NA	False	ATTAAA	-8	NA	148593967	148531497	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_148533249_148573229_148573339_148574052_148574226_148574877_148574930_148575638_148575812_148576409_148576462_148577182_148577356_148577982_148578035_148579073_148579238_148583140_148583193_148584470_148584677_148585140_148585214_148592551_148592767_148593597
H1_mix_00007156	chr1	-	5120	2	ISM	ENSG00000270629.7	ENST00000606877.2	1370	8	76780	3929	-6951	-3929	internal_fragment	FALSE	canonical	2	3	junction_1	0	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTTTTGAGCAAAATGCC	NA	False	NA	NA	False	TATAAA	-2	NA	148602962	148597573	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_148598344_148598612
H1_mix_00007158	chr1	-	2844	16	NNC	ENSG00000269713.8	novel	5632	28	NA	NA	0	-12964	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_9	18.7753976137805	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCCAGGTAAGGTGGCC	NA	False	NA	NA	False	NA	NA	NA	149103561	149072726	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_149072933_149073767_149073871_149075654_149075865_149077207_149077420_149077882_149077956_149079006_149079222_149080052_149080156_149081964_149082175_149082271_149082431_149090204_149090429_149090752_149090895_149098437_149098707_149100740_149100931_149101261_149101380_149102728_149102848_149103270
H1_mix_00007161	chr1	-	4273	15	Fusion	ENSG00000264522.6_ENSG00000014914.21	novel	2840	17	NA	NA	-1248	0	intron_retention	FALSE	canonical	2	5	junction_4	6.08821209638858	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGCATTGTTTCTTGT	1049	False	NA	-1	True	ATTAAA	-19	NA	149938127	149928650	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_-_149929318_149929622_149929917_149930364_149930548_149930791_149930966_149931943_149932015_149932263_149932331_149933405_149933531_149933609_149933699_149933854_149933943_149934190_149934327_149934447_149934527_149934985_149935129_149935298_149935360_149935583_149935706_149936153
H1_mix_00007162	chr1	-	964	2	FSM	ENSG00000014914.21	ENST00000490310.1	1067	2	0	103	0	-103	multi-exon	FALSE	canonical	3	14	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCCTTTTTGTCCTTCCT	7789	False	NA	NA	False	NA	NA	NA	149931387	149930179	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_149930548_149930791
H1_mix_00007164	chr1	-	2986	7	FSM	ENSG00000143401.15	ENST00000616917.4	2989	7	3	0	3	0	multi-exon	FALSE	canonical	3	6	junction_6	440.389978693128	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAAAAAATTTGCAGTA	1	True	NA	-58	True	AATAAA	-21	NA	150234675	150218554	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_150220762_150223185_150223241_150226607_150226796_150229071_150229238_150230570_150230694_150231776_150231927_150234578
H1_mix_00007165	chr1	-	616	3	FSM	ENSG00000143401.15	ENST00000534437.1	616	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	586.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGGTGTAGTATGGTGCA	9425	False	NA	-9	True	ATTAAA	-16	NA	150226730	150220377	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_150220762_150223185_150223295_150226607
H1_mix_00007167	chr1	-	2564	8	Fusion	ENSG00000117362.13_ENSG00000289041.1	novel	1730	7	NA	NA	-39	316	multi-exon	FALSE	canonical	2	8	junction_7	162.386161067138	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATTAAAGTCAGAAACTT	NA	False	NA	NA	False	NA	NA	NA	150282210	150265082	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_-_150266195_150266532_150266657_150267074_150267203_150267355_150267479_150267715_150267790_150267956_150268128_150268697_150269330_150282010
H1_mix_00007169	chr1	-	4524	2	FSM	ENSG00000143384.14	ENST00000676522.1	4524	2	0	0	0	0	multi-exon	FALSE	canonical	3	616	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGGGGTGAACACCTTG	9	True	NA	NA	False	AAAACA	-30	NA	150579594	150574719	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_150578492_150578842
H1_mix_00007171	chr1	-	273	1	FSM	ENSG00000276103.1	ENST00000620626.1	117	1	111	-267	111	267	mono-exon	FALSE	NA	NA	NA	NA	NA	337	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCCTGTAATCCCAATACT	9826	False	NA	NA	False	AAAAAG	-24	NA	150608512	150608239	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_150608200_150608500
H1_mix_00007176	chr1	-	7821	28	Fusion	ENSG00000143437.21_ENSG00000143387.14	novel	2892	23	NA	NA	0	0	intron_retention	FALSE	canonical	2	19	junction_5	132.469423446123	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTTAATAAATAGCATCTA	3	True	NA	-30	True	AATAAA	-20	NA	150876708	150796238	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_-_150796899_150799167_150799274_150799543_150799710_150804020_150804240_150805860_150806017_150806101_150806225_150806685_150806807_150808213_150812111_150813171_150813339_150814076_150814237_150816258_150816407_150816787_150816891_150817081_150817203_150817360_150817434_150817919_150818031_150823193_150823346_150826542_150826618_150829092_150829228_150829903_150829981_150831817_150831904_150832333_150832400_150834537_150834641_150836279_150836494_150839440_150839655_150846262_150846308_150852761_150852807_150858348_150858461_150876542
H1_mix_00007177	chr1	-	2224	11	NIC	ENSG00000143418.20	novel	2323	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	91	junction_10	178.326666542051	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCCTTGCAGTTATGT	2736	False	NA	-19	True	AATAAA	-19	NA	150974435	150965185	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_150966289_150966475_150966630_150966755_150966863_150967073_150967203_150967391_150967485_150967663_150967715_150967819_150967878_150968082_150968202_150968394_150968513_150968917_150969092_150974317
H1_mix_00007180	chr1	-	5284	19	FSM	ENSG00000143434.17	ENST00000341697.7	5262	19	0	-22	0	0	multi-exon	FALSE	canonical	2	3	junction_18	14.4012173696669	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCCTTAGGAGAATTT	1173	False	NA	4	True	AATAAA	-44	NA	151146611	151131684	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151133518_151134400_151134446_151134619_151134676_151134797_151134876_151135162_151135310_151135590_151135765_151136010_151136164_151136447_151136580_151136856_151137075_151137710_151137800_151137985_151138106_151138315_151138407_151138629_151138732_151139424_151139482_151139637_151139702_151139975_151140091_151142503_151142676_151144384_151144435_151145023
H1_mix_00007181	chr1	-	485	4	FSM	ENSG00000143434.17	ENST00000464018.5	485	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	8.65383665716478	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCCTTCCCCAGGCCCA	NA	False	NA	NA	False	AATAAA	-17	NA	151135266	151134198	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151134446_151134619_151134676_151134797_151134876_151135162
H1_mix_00007182	chr1	-	1347	6	FSM	ENSG00000163159.15	ENST00000354473.4	1347	6	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	325.336379767157	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTGGTGTCCAGTCT	10	True	NA	-15	True	AATAAA	-14	NA	151190158	151176461	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151177065_151178000_151178146_151184316_151184494_151185505_151185621_151185797_151185951_151190004
H1_mix_00007183	chr1	-	3680	12	FSM	ENSG00000143393.17	ENST00000368873.6	3673	12	0	-7	0	0	multi-exon	FALSE	canonical	2	5	junction_10	58.8360939425216	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCCTCTCCTGTGGCCCC	-11	True	NA	-8	True	AATAAA	-20	NA	151327416	151291796	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151293034_151294017_151294139_151294408_151294542_151298807_151299074_151301843_151301968_151302193_151302299_151303540_151303651_151306135_151306364_151307573_151307802_151310210_151310256_151315572_151316510_151327270
H1_mix_00007184	chr1	-	3611	12	NIC	ENSG00000143393.17	novel	3331	13	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_11	52.8459479513428	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTCCAAGTCACAGAAAAAG	343	False	NA	NA	False	NA	NA	NA	151327359	151291936	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_151293034_151294017_151294139_151294408_151294542_151298807_151299074_151301843_151301968_151302193_151302299_151303540_151303651_151306135_151306364_151307573_151307802_151315572_151316510_151324744_151324918_151327270
H1_mix_00007185	chr1	-	3983	13	FSM	ENSG00000143393.17	ENST00000368875.6	3983	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	60.5933623060774	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTCCAAGTCACAGAAAAAG	6	True	NA	NA	False	NA	NA	NA	151327657	151291936	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151293034_151294017_151294139_151294408_151294542_151298807_151299074_151301843_151301968_151302193_151302299_151303540_151303651_151306135_151306364_151307573_151307802_151310210_151310256_151315572_151316510_151326171_151326374_151327270
H1_mix_00007186	chr1	-	3635	13	FSM	ENSG00000143393.17	ENST00000368872.5	3331	13	42	-346	0	0	multi-exon	FALSE	canonical	3	13	junction_11	50.9713290869376	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTGTCATTTCCAGGT	28	True	NA	-7	True	AATAAA	-14	NA	151327377	151292132	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151293034_151294017_151294139_151294408_151294542_151298807_151299074_151301843_151301968_151302193_151302299_151303540_151303651_151306135_151306364_151307573_151307802_151315572_151316510_151324744_151324918_151326171_151326374_151327270
H1_mix_00007189	chr1	-	3570	11	FSM	ENSG00000143390.18	ENST00000452671.7	3570	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	99.4034204642878	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTTTGTGTTCCTCCCT	14	True	NA	-20	True	ATTAAA	-16	NA	151347252	151340639	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151343179_151343341_151343443_151343680_151343883_151344196_151344279_151344416_151344537_151344727_151344848_151345105_151345189_151345927_151345962_151346204_151346334_151346488_151346607_151347210
H1_mix_00007190	chr1	-	2056	11	FSM	ENSG00000143390.18	ENST00000392746.7	2056	11	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_9	101.49679797905	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGCTTCAAAGTTCCT	0	True	NA	NA	False	AATAAA	-12	NA	151346822	151342246	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151343179_151343341_151343443_151343680_151343883_151344196_151344279_151344416_151344537_151344727_151344848_151345105_151345189_151345927_151345962_151346204_151346334_151346421_151346607_151346754
H1_mix_00007199	chr1	-	2840	8	FSM	ENSG00000143416.21	ENST00000474352.5	2840	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	88.8311859193422	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGGCCTTGTCTTTGGGG	-2	True	NA	-41	True	AATAAA	-19	NA	151372705	151364304	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151364706_151364925_151365045_151365188_151365685_151365767_151366454_151366721_151366905_151368198_151368320_151369003_151369770_151372637
H1_mix_00007202	chr1	-	6624	19	FSM	ENSG00000143442.22	ENST00000409503.5	4813	19	-310	-1501	5	1	multi-exon	FALSE	canonical	3	11	junction_13	31.3443637007113	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGTTGAGACTGAATGT	-17	True	NA	-6	True	AATAAA	-21	NA	151459489	151402722	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151406465_151406606_151406632_151406910_151407024_151407234_151407292_151408099_151408241_151408408_151408582_151408693_151408829_151411624_151411772_151412295_151412397_151423396_151423552_151423948_151424287_151424954_151425062_151427822_151428015_151428122_151428414_151429602_151429712_151430665_151430842_151440927_151441087_151442080_151442206_151459151
H1_mix_00007204	chr1	-	949	9	FSM	ENSG00000143442.22	ENST00000529669.1	949	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_7	44.6395284473302	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCACCAACCCCCACTCAC	7351	False	NA	NA	False	NA	NA	NA	151423421	151406285	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151406465_151406606_151406632_151406910_151407024_151407234_151407292_151408099_151408241_151408408_151408582_151408693_151408829_151412295_151412397_151423396
H1_mix_00007208	chr1	-	542	3	FSM	ENSG00000143436.11	ENST00000468006.1	531	3	0	-11	0	4	multi-exon	FALSE	canonical	3	30	junction_1	248.5	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGCTTACTGGTCTTGA	6621	False	NA	-1	True	AATAAA	-24	NA	151761519	151759642	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151760032_151760815_151760900_151761450
H1_mix_00007209	chr1	-	364	5	FSM	ENSG00000143436.11	ENST00000492684.5	364	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	327.423655223626	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATGTCAAATGGGAGCTG	5073	False	NA	NA	False	AAAAAG	-27	NA	151763067	151761506	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151761553_151761961_151762026_151762104_151762156_151762375_151762501_151762989
H1_mix_00007211	chr1	-	3779	14	Fusion	ENSG00000249602.1_ENSG00000182134.17	novel	2217	14	NA	NA	0	1462	multi-exon	FALSE	canonical	3	31	junction_1	64.84282316476	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACACCTACTTGGAGCAG	13	True	NA	-3	True	AATAAA	-39	NA	151790488	151768644	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_-_151770563_151774412_151774505_151774709_151774807_151775064_151775167_151775391_151775544_151775819_151775885_151776095_151776269_151776438_151776600_151778684_151779007_151779102_151779243_151779950_151780141_151781480_151781588_151782898_151783050_151790379
H1_mix_00007212	chr1	-	4505	14	NIC	ENSG00000182134.17	novel	3093	14	NA	NA	-10	-39	combination_of_known_junctions	FALSE	canonical	3	61	junction_1	66.6131639352723	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTCAACTGAAATATATGG	-31	True	NA	NA	False	NA	NA	NA	151790532	151771602	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_151774228_151774412_151774505_151774709_151774807_151775064_151775167_151775391_151775544_151775819_151775885_151776095_151776269_151776438_151776600_151778684_151779007_151779102_151779243_151779950_151780141_151781480_151781588_151782898_151783050_151790404
H1_mix_00007214	chr1	-	2385	5	FSM	ENSG00000159445.13	ENST00000483207.5	2406	5	21	0	21	0	multi-exon	FALSE	canonical	3	50	junction_4	20.897069172494	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAACTCTTGTC	NA	False	NA	NA	False	NA	NA	NA	151891419	151874376	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151874929_151877000_151877126_151888272_151888384_151889213_151889374_151889982
H1_mix_00007215	chr1	-	591	4	NNC	ENSG00000163191.6	novel	563	3	NA	NA	0	45480	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1634.92038542146	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACACTGATGTTGCTTTT	-1	True	NA	NA	False	AAAAAG	-2	NA	152037004	151987025	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_151987054_152032505_152032824_152033647_152033801_152036912
H1_mix_00007216	chr1	-	586	4	NNC	ENSG00000163191.6	novel	563	3	NA	NA	0	45480	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1634.92038542146	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACACTGATGTTGCTTTT	-1	True	NA	NA	False	AAAAAG	-2	NA	152037004	151987025	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_151987054_152032510_152032824_152033647_152033801_152036912
H1_mix_00007217	chr1	-	781	3	FSM	ENSG00000197956.10	ENST00000496817.5	673	3	-110	2	-81	-2	multi-exon	FALSE	canonical	1	2	junction_2	73	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCCTTGCGTCCTGGCTTC	9695	False	NA	-8	True	AATAAA	-18	NA	153536325	153534600	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153534831_153535201_153535376_153535948
H1_mix_00007218	chr1	-	1273	4	NNC	ENSG00000188643.11	novel	1172	3	NA	NA	-57	26204	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	381.954912987849	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGGTGTGTCCATTAGAT	3120	False	NA	NA	False	NA	NA	NA	153613202	153580681	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_153580722_153606889_153607693_153607998_153608178_153612951
H1_mix_00007219	chr1	-	1025	3	FSM	ENSG00000189334.9	ENST00000476873.5	1025	3	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_1	4.5	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTGTCTTGACTGGACA	8608	False	NA	-9	True	AATAAA	-21	NA	153615938	153614254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153615023_153615234_153615382_153615828
H1_mix_00007220	chr1	-	1136	4	FSM	ENSG00000189334.9	ENST00000368701.5	1080	4	-56	0	-20	0	multi-exon	FALSE	canonical	2	28	junction_3	147.359726142827	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTGTCTTGACTGGACA	8201	False	NA	-9	True	AATAAA	-21	NA	153616345	153614254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153615023_153615234_153615382_153615828_153615937_153616232
H1_mix_00007222	chr1	-	5733	29	NNC	ENSG00000198837.10	novel	5728	28	NA	NA	17	33072	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	47.2451676613274	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACTGTTCACTCTTACA	-1	True	NA	NA	False	AAAAAG	-5	NA	153946701	153896428	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_153896449_153929502_153930443_153930538_153930604_153930691_153930858_153930946_153931065_153932203_153932441_153932641_153932778_153932860_153933031_153933196_153933320_153933482_153933872_153934134_153934303_153934759_153934965_153936059_153936189_153936541_153936749_153937487_153937615_153937723_153937864_153938899_153939046_153939588_153939805_153940155_153940257_153940430_153940607_153940903_153941049_153941230_153941290_153941373_153941441_153941868_153942114_153942186_153942357_153942555_153942626_153942877_153943131_153944057_153944398_153946296
H1_mix_00007223	chr1	-	2067	5	NNC	ENSG00000143570.19	novel	2038	4	NA	NA	0	33753	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	921.519804453491	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAATGCTGCTTGCAGTG	-6	True	NA	NA	False	AATAGA	-40	NA	153963537	153925345	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_153925371_153959105_153960755_153962219_153962351_153962528_153962748_153963494
H1_mix_00007226	chr1	-	2731	15	NNC	ENSG00000160741.17	novel	2631	14	NA	NA	-14	1	at_least_one_novel_splicesite	FALSE	non_canonical	3	39	junction_8	47.1995870787888	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGTGTGGTTAGTTATT	-17	True	NA	-2	True	AATAAA	-16	NA	153958629	153947673	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_153948330_153948457_153948645_153948833_153948901_153949114_153949385_153951259_153951667_153952017_153952263_153952396_153952447_153952570_153952651_153952804_153952835_153953265_153953370_153953537_153953607_153954254_153954315_153954870_153954990_153955064_153955167_153958344
H1_mix_00007228	chr1	-	1971	3	FSM	ENSG00000143570.19	ENST00000537590.5	2022	3	51	0	51	0	multi-exon	FALSE	canonical	3	54	junction_1	705	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGATTCGTTTGTTTTGGG	4560	False	NA	-1	True	AATAAA	-27	NA	153963590	153959098	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153960755_153962528_153962748_153963494
H1_mix_00007229	chr1	-	2207	5	FSM	ENSG00000143570.19	ENST00000617697.4	2214	5	0	7	0	4	multi-exon	FALSE	canonical	1	1	junction_4	1124.13577916549	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTATCTGATTCGTTTG	9799	False	NA	-8	True	AATAAA	-20	NA	153968184	153959105	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153960755_153962219_153962351_153962528_153962748_153963596_153963704_153968083
H1_mix_00007230	chr1	-	1096	9	NNC	ENSG00000143545.10	novel	1164	8	NA	NA	0	10877	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	270.088151119223	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTAAGATGCTTAGCTT	5847	False	NA	NA	False	NA	NA	NA	153986246	153970739	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_153970765_153981649_153982177_153982390_153982445_153982534_153982601_153982718_153982809_153983218_153983297_153983520_153983582_153984720_153984782_153986112
H1_mix_00007232	chr1	-	1459	4	FSM	ENSG00000143543.15	ENST00000368589.5	1216	4	0	-243	0	0	multi-exon	FALSE	canonical	3	951	junction_2	16.2138486760204	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGAGGTACCCTCTCA	1	True	NA	-2	True	AATAAA	-21	NA	153977660	153974268	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153974836_153975825_153975906_153976692_153977014_153977169
H1_mix_00007233	chr1	-	754	3	FSM	ENSG00000143543.15	ENST00000471173.1	754	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	472	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGTTCAAAAGGTGAGTG	3	True	NA	NA	False	NA	NA	NA	153977626	153975838	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153975906_153976692_153976923_153977169
H1_mix_00007234	chr1	-	2076	9	NNC	ENSG00000143549.21	novel	1582	9	NA	NA	0	29563	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2295.21940331965	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTCCTTCCTTCCTTCC	8970	False	NA	NA	False	AAAACA	-11	NA	154183130	154125740	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_154125786_154156363_154157722_154170399_154170470_154170648_154170712_154172028_154172105_154172907_154172979_154173083_154173200_154176114_154176249_154182987
H1_mix_00007235	chr1	-	2152	9	NNC	ENSG00000143549.21	novel	1582	9	NA	NA	0	29563	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1774.68803156358	530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTCCTTCCTTCCTTCC	11	True	NA	NA	False	AAAACA	-11	NA	154183205	154125740	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_154125785_154156363_154157722_154170399_154170470_154170648_154170712_154172028_154172105_154172907_154172979_154173083_154173202_154176114_154176249_154182987
H1_mix_00007237	chr1	-	3196	4	FSM	ENSG00000143549.21	ENST00000368545.7	2147	4	0	-1049	0	0	multi-exon	FALSE	canonical	3	4813	junction_2	249.84128295113	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTGCTTGTTCCTTAC	9502	False	NA	-5	True	ATTAAA	-31	NA	154172677	154155307	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154157722_154170399_154170470_154170648_154170712_154172028
H1_mix_00007243	chr1	-	1163	6	FSM	ENSG00000143612.21	ENST00000368519.5	1163	6	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	306.234811868279	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCTTAAAAATCTTCACT	-14	True	NA	NA	False	NA	NA	NA	154220585	154207175	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154207649_154212319_154212379_154212457_154212625_154214456_154214575_154219835_154219938_154220341
H1_mix_00007245	chr1	-	6777	14	FSM	ENSG00000160710.18	ENST00000647682.2	6777	14	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_13	268.134912611071	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTCACGCCATTCTCCTG	3	True	NA	NA	False	NA	NA	NA	154608114	154581694	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154585044_154585216_154585345_154585752_154585866_154586180_154586364_154588124_154588259_154588550_154588674_154589368_154589463_154589756_154590410_154596804_154596996_154597122_154597268_154597827_154597977_154598401_154598586_154601040_154602249_154607991
H1_mix_00007247	chr1	-	6971	16	FSM	ENSG00000160710.18	ENST00000648231.2	6971	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_14	332.884724792232	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAGAAAGTTTTAAGTC	-7	True	NA	-13	True	AATAAA	-20	NA	154608186	154582066	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154585044_154585216_154585345_154585752_154585866_154586180_154586364_154588124_154588259_154588550_154588674_154589368_154589463_154589756_154589929_154590183_154590410_154596804_154596996_154597122_154597268_154597827_154597977_154598401_154598586_154601040_154602627_154606005_154606377_154607991
H1_mix_00007248	chr1	-	6393	15	NIC	ENSG00000160710.18	novel	6519	15	NA	NA	2	0	intron_retention	FALSE	canonical	3	170	junction_8	240.234919040781	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAGAAAGTTTTAAGTC	5	True	NA	-13	True	AATAAA	-20	NA	154627920	154582066	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_154585044_154585216_154585345_154585752_154585866_154586180_154586364_154588124_154588259_154588550_154588674_154589368_154589463_154589756_154589929_154590261_154590410_154596804_154596996_154597122_154597268_154597827_154597977_154598401_154598586_154601040_154602627_154627854
H1_mix_00007253	chr1	-	3202	4	NNC	ENSG00000163348.4	novel	3180	3	NA	NA	0	51003	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	128.502485924938	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	-21	True	NA	NA	False	NA	NA	NA	154961782	154906022	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_154906048_154957028_154959847_154960976_154961027_154961473
H1_mix_00007254	chr1	-	3611	2	ISM	ENSG00000163348.4	ENST00000368457.3	3180	3	13	3	13	-3	intron_retention	FALSE	canonical	3	288	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGACAAGGACTCCTTGCT	-8	True	NA	-10	True	AATAAA	-15	NA	154961769	154957028	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_154959847_154960976
H1_mix_00007255	chr1	-	727	2	FSM	ENSG00000160691.19	ENST00000490667.1	727	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTGGACCCCTGAATTC	8684	False	NA	-3	True	NA	NA	NA	154965762	154963328	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154963932_154965638
H1_mix_00007257	chr1	-	1136	3	NNC	ENSG00000232093.1	novel	822	2	NA	NA	-4884	-16	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	6.5	42	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTAAAGTGTGAAACATT	3554	False	NA	-20	True	ATTAAA	-6	NA	155051002	155045206	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_155045854_155049268_155049362_155050606
H1_mix_00007258	chr1	-	529	2	FSM	ENSG00000179085.8	ENST00000341298.3	486	2	44	-87	-20	87	multi-exon	FALSE	canonical	3	107	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCATCTCAGCCTTTATC	-14	True	NA	83	True	NA	NA	NA	155140551	155139803	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155140272_155140490
H1_mix_00007260	chr1	-	859	8	FSM	ENSG00000185499.17	ENST00000337604.6	859	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	3.65892813567591	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGAGCTGAGTGGCCAGC	9235	False	NA	NA	False	NA	NA	NA	155192868	155186122	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155186210_155187224_155187375_155187454_155187577_155187721_155187859_155188007_155188064_155188162_155188286_155192182_155192284_155192785
H1_mix_00007262	chr1	-	2727	21	FSM	ENSG00000169231.13	ENST00000457183.6	2727	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	9.76665244595097	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCAAGGGGTATTACTCA	0	True	NA	-81	True	NA	NA	NA	155207917	155195665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155195900_155195986_155196127_155197040_155197214_155197462_155197660_155197879_155197929_155198041_155198221_155198408_155198603_155199803_155199857_155199994_155200114_155200450_155200611_155200896_155201005_155201093_155201205_155201416_155201570_155201956_155202035_155202260_155202402_155202811_155202961_155203085_155203138_155203222_155203306_155203512_155203540_155206199_155206407_155207797
H1_mix_00007264	chr1	-	830	4	ISM	ENSG00000160766.15	ENST00000693555.1	1768	8	745	2559	626	-2016	internal_fragment	FALSE	canonical	3	16	junction_3	30.9012764928714	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGCCTGGACCTCCATG	9293	False	NA	NA	False	NA	NA	NA	155218248	155216383	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_155216622_155216856_155217030_155217239_155217374_155217963
H1_mix_00007267	chr1	-	3138	12	NIC	ENSG00000160767.22	novel	3190	12	NA	NA	55	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_7	31.5924460057796	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCTGTCACCAGTGAAAT	0	True	NA	-16	True	AATAAA	-30	NA	155255428	155247204	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_155247956_155248049_155248304_155248404_155248474_155250275_155250822_155251094_155251165_155251501_155251602_155251732_155251909_155253624_155253733_155253858_155253979_155254083_155254195_155254399_155254457_155254652
H1_mix_00007269	chr1	-	649	3	FSM	ENSG00000116521.11	ENST00000478737.5	649	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	328.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCGTTTCCTGAATCTTC	3517	False	NA	-1	True	AATAAA	-25	NA	155258915	155255978	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155256420_155256673_155256792_155258825
H1_mix_00007270	chr1	-	1309	9	NNC	ENSG00000116521.11	novel	1545	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_8	202.399975296441	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCGTTTCCTGAATCTTC	2	True	NA	-1	True	AATAAA	-25	NA	155261868	155255978	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_155256420_155256673_155256792_155257284_155257387_155257497_155257658_155258825_155258955_155260329_155260451_155260536_155260660_155261656_155261735_155261831
H1_mix_00007271	chr1	-	1372	9	NNC	ENSG00000116521.11	novel	1545	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_5	190.969238360528	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCGTTTCCTGAATCTTC	8	True	NA	-1	True	AATAAA	-25	NA	155262227	155255978	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_155256420_155256673_155256792_155257284_155257387_155257497_155257658_155258825_155258913_155260329_155260451_155260536_155260660_155261656_155261735_155262085
H1_mix_00007272	chr1	-	1408	9	NNC	ENSG00000116521.11	novel	1545	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	200.422054674629	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCCCGTTTCCTGAATCT	8	True	NA	-3	True	AATAAA	-23	NA	155262227	155255980	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_155256420_155256673_155256792_155257284_155257387_155257497_155257654_155258825_155258955_155260329_155260451_155260536_155260660_155261656_155261735_155262085
H1_mix_00007275	chr1	-	2702	7	FSM	ENSG00000176444.19	ENST00000497188.1	2702	7	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_4	38.9590240580479	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGACCCCCATCCCTGGA	4163	False	NA	-14	True	AATAAA	-13	NA	155269363	155262879	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155263401_155263949_155264551_155264644_155264775_155265859_155265955_155266728_155266896_155268009_155268127_155268292
H1_mix_00007276	chr1	-	2275	14	NNC	ENSG00000176444.19	novel	2154	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_2	124.983454526291	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGACCCCCATCCCTGGA	22	False	155273526	-14	True	AATAAA	-13	NA	155273504	155262879	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_155263401_155263572_155263709_155263949_155264041_155264220_155264301_155264467_155264551_155264644_155264775_155265859_155265955_155266728_155266896_155268009_155268127_155268292_155268360_155268707_155268793_155269487_155269717_155270807_155270978_155273200
H1_mix_00007278	chr1	-	6295	25	ISM	ENSG00000116539.14	ENST00000678699.1	11458	28	81022	-19	-69728	0	3prime_fragment	FALSE	canonical	0	0	junction_24	3.66287682930599	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGACTGATGAGCTTGC	NA	False	NA	-10	True	ATTAAA	-20	NA	155440596	155335267	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_155337752_155338088_155338391_155339327_155339369_155341935_155342103_155343313_155343487_155343603_155343743_155344182_155344274_155346382_155346470_155347655_155347905_155349326_155349460_155349541_155349597_155352705_155352859_155354472_155354631_155357315_155357411_155357584_155357750_155360300_155360410_155370503_155370651_155370776_155370984_155378280_155378390_155378502_155378549_155380042_155380117_155395458_155395554_155415743_155415924_155438326_155439069_155440502
H1_mix_00007279	chr1	-	11260	27	FSM	ENSG00000116539.14	ENST00000679333.1	11250	27	9	-19	9	0	multi-exon	FALSE	canonical	1	1	junction_22	3.68910117177901	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGACTGATGAGCTTGC	NA	False	NA	-10	True	ATTAAA	-20	NA	155562832	155335267	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155337752_155338088_155338391_155339327_155339369_155341935_155342103_155343313_155343487_155343603_155343743_155344182_155344274_155346382_155346470_155347655_155347905_155349326_155349460_155349541_155349597_155352705_155352859_155354472_155354631_155357315_155357411_155357584_155357750_155360300_155360410_155370503_155370651_155370776_155370984_155378280_155378390_155378502_155378549_155380042_155380117_155395458_155395554_155438326_155439069_155459796_155459899_155477885_155482450_155521099_155521619_155562778
H1_mix_00007280	chr1	-	542	1	FSM	ENSG00000223503.1	ENST00000427475.1	662	1	-94	214	-94	-214	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGTGGCTGAGGCCCAAA	NA	False	NA	NA	False	NA	NA	NA	155591356	155590814	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155590800_155591400
H1_mix_00007281	chr1	-	710	2	NNC	ENSG00000246203.2	novel	2505	9	NA	NA	43852	-868	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAATAAGACCCCTGCTG	NA	False	NA	NA	False	NA	NA	NA	155616393	155615593	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_155615675_155615764
H1_mix_00007283	chr1	-	2930	10	FSM	ENSG00000163374.20	ENST00000368340.9	2927	10	0	-3	0	0	multi-exon	FALSE	canonical	3	113	junction_3	83.1497236508329	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGCAATTTGTTCAGT	420	False	NA	0	True	AATAAA	-32	NA	155688573	155659442	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155660914_155661306_155661424_155668626_155668718_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688070
H1_mix_00007284	chr1	-	3115	10	FSM	ENSG00000163374.20	ENST00000368339.9	3073	10	-13	-29	0	29	multi-exon	FALSE	canonical	3	233	junction_3	53.2897970453613	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTCCAAGAACCTGGAC	2	True	NA	29	True	NA	NA	NA	155688669	155659413	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155660914_155661306_155661424_155668626_155668778_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688070
H1_mix_00007287	chr1	-	2629	11	FSM	ENSG00000163374.20	ENST00000295566.8	2626	11	0	-3	0	0	multi-exon	FALSE	canonical	3	27	junction_10	117.907124466675	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGCAATTTGTTCAGT	-7	True	NA	0	True	AATAAA	-32	NA	155689000	155659442	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155660914_155661306_155661424_155668626_155668718_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688070_155688202_155688929
H1_mix_00007288	chr1	-	2558	10	FSM	ENSG00000163374.20	ENST00000368330.6	2555	10	0	-3	0	0	multi-exon	FALSE	canonical	3	50	junction_9	103.225511250076	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGCAATTTGTTCAGT	-7	True	NA	0	True	AATAAA	-32	NA	155689000	155659442	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155660914_155661306_155661424_155668626_155668778_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688929
H1_mix_00007292	chr1	-	7745	32	FSM	ENSG00000116580.20	ENST00000368331.6	7745	32	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	38.2206475353688	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCAGTTTTCTTCACCTCC	-13	True	NA	NA	False	AGTAAA	-20	NA	155857214	155749658	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155750734_155751766_155751870_155751959_155752591_155753203_155753415_155754374_155754489_155756957_155757078_155757179_155757324_155757890_155758035_155760443_155760642_155762189_155762375_155763311_155763565_155764999_155766710_155767424_155767542_155771066_155771218_155773065_155773211_155775001_155775174_155776394_155776482_155777621_155777821_155783985_155784090_155785333_155785375_155795049_155795152_155804948_155805142_155813633_155813805_155814329_155814450_155815804_155815901_155816211_155816263_155820605_155820657_155821473_155821549_155822285_155822477_155826836_155827029_155853275_155853807_155857146
H1_mix_00007293	chr1	-	7665	32	FSM	ENSG00000116580.20	ENST00000437809.5	7713	32	48	0	48	0	multi-exon	FALSE	canonical	2	12	junction_31	37.5147005525064	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTCAGCACTTTTAATC	8828	False	NA	NA	False	AATAAA	-19	NA	155859352	155749716	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155750734_155751766_155751870_155751959_155752588_155753203_155753415_155754374_155754489_155756957_155757078_155757179_155757324_155757890_155758035_155760443_155760642_155762189_155762375_155763311_155763565_155764999_155766710_155767424_155767542_155771066_155771218_155773065_155773211_155775001_155775174_155776394_155776482_155777621_155777821_155783985_155784090_155785333_155785375_155795049_155795152_155804948_155805142_155813633_155813805_155814329_155814450_155815804_155815901_155816211_155816263_155820605_155820657_155821473_155821549_155822285_155822477_155826836_155827029_155853275_155853807_155859303
H1_mix_00007294	chr1	-	7047	32	FSM	ENSG00000116580.20	ENST00000271883.9	7138	32	91	0	0	0	multi-exon	FALSE	canonical	3	25	junction_31	36.7757781209261	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCTACTTTTTTTTGGT	-3	True	NA	NA	False	NA	NA	NA	155857204	155750331	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155750734_155751766_155751870_155751959_155752588_155753203_155753415_155754374_155754489_155756957_155757078_155757179_155757324_155757890_155758035_155760443_155760642_155762189_155762375_155763311_155763565_155764999_155766710_155767424_155767542_155771066_155771218_155773065_155773211_155775001_155775174_155776394_155776482_155777621_155777821_155783985_155784090_155785333_155785375_155795049_155795152_155804948_155805142_155813633_155813805_155814329_155814450_155815804_155815901_155816211_155816263_155820605_155820657_155821473_155821549_155822285_155822477_155826836_155827029_155853275_155853807_155857158
H1_mix_00007295	chr1	-	3314	21	NIC	ENSG00000116580.20	novel	5118	21	NA	NA	3	265	combination_of_known_junctions	TRUE	canonical	1	1	junction_20	49.4445143570043	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGCAGCACTGCCTGCT	5622	False	NA	NA	False	NA	NA	NA	155853806	155766270	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_155766710_155767424_155767542_155771066_155771218_155773065_155773211_155775001_155775174_155776394_155776482_155777621_155777821_155783985_155784090_155785333_155785375_155795049_155795152_155804948_155805142_155813633_155813805_155814329_155814450_155815804_155815901_155816211_155816263_155820605_155820657_155821473_155821549_155822285_155822477_155826836_155827029_155831534_155831621_155853275
H1_mix_00007299	chr1	-	2674	14	NIC	ENSG00000132680.11	novel	2961	14	NA	NA	11	-135	combination_of_known_junctions	FALSE	canonical	3	32	junction_5	51.3312712513924	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAGATATTGAACTGTCA	8564	False	NA	NA	False	NA	NA	NA	155934362	155913179	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_155914321_155915872_155915965_155916624_155916738_155917498_155917673_155921374_155921528_155921860_155921919_155923626_155923688_155925631_155925844_155926675_155926840_155927103_155927157_155929295_155929376_155929711_155929841_155933632_155933850_155934335
H1_mix_00007304	chr1	-	1834	2	FSM	ENSG00000163479.14	ENST00000472467.1	1833	2	0	-1	0	0	multi-exon	FALSE	canonical	3	1885	junction_1	0	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGTTTTCTTAGCCC	7926	False	NA	-15	True	AATAAA	-18	NA	156013040	156009047	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156009651_156011809
H1_mix_00007306	chr1	-	1150	6	FSM	ENSG00000163479.14	ENST00000484320.6	1148	6	0	-2	0	0	multi-exon	FALSE	canonical	2	2	junction_3	723.584521669722	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGTTAGAGAAGTGCTTA	18	True	NA	-72	True	AATGAA	-37	NA	156020912	156009104	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156009651_156011809_156011888_156014960_156015070_156018131_156018369_156020012_156020168_156020887
H1_mix_00007312	chr1	-	660	3	FSM	ENSG00000198715.13	ENST00000461597.1	658	3	0	-2	0	2	multi-exon	FALSE	canonical	2	8	junction_1	208.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGTGTTCCATTGTAT	2289	False	NA	-3	True	TATAAA	-26	NA	156293381	156290086	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156290361_156292885_156293210_156293319
H1_mix_00007313	chr1	-	1941	7	FSM	ENSG00000198715.13	ENST00000647767.1	1941	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	151.912255375705	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCGTGAGCCACCGCGCCT	-10	True	NA	NA	False	NA	NA	NA	156295680	156290579	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156291107_156292885_156293210_156293319_156293577_156294017_156294237_156294364_156294566_156294758_156295017_156295525
H1_mix_00007314	chr1	-	906	3	FSM	ENSG00000198715.13	ENST00000479084.1	906	3	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_1	30	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTCCCAGAAGCCGGGGG	678	False	NA	NA	False	GGGGCT	-38	NA	156294992	156293517	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156293577_156294017_156294237_156294364
H1_mix_00007316	chr1	-	1858	15	FSM	ENSG00000163468.15	ENST00000472765.6	1858	15	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_13	1172.64908760168	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGAGTCTCCCCTTTTCCT	11	True	NA	NA	False	NA	NA	NA	156338257	156309164	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156309304_156310557_156310690_156310949_156311196_156312040_156312222_156317165_156317248_156317414_156317548_156318867_156319018_156320838_156321026_156324971_156325090_156333546_156333644_156334712_156334776_156334867_156334919_156335826_156335889_156337676_156337790_156338153
H1_mix_00007318	chr1	-	1159	8	FSM	ENSG00000160818.17	ENST00000438976.6	1159	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_7	170.172061785256	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAAGAAGCAGGAAAAGCA	5	True	NA	-16	True	NA	NA	NA	156601470	156595212	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156595850_156596080_156596132_156596386_156596479_156598034_156598122_156598226_156598320_156598420_156598495_156598967_156599031_156601408
H1_mix_00007324	chr1	-	762	6	FSM	ENSG00000160818.17	ENST00000531129.5	532	6	0	-230	0	-130	multi-exon	FALSE	canonical	3	23	junction_4	174.238916433729	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGCCCGTCTTGGGATCA	-4	True	NA	NA	False	NA	NA	NA	156601479	156595849	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156596132_156596386_156596479_156598034_156598122_156598226_156598320_156598967_156599105_156601408
H1_mix_00007326	chr1	-	1029	5	FSM	ENSG00000160818.17	ENST00000506832.6	1029	5	0	0	0	0	multi-exon	FALSE	canonical	3	455	junction_4	26.0612259880459	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCACTTCGGGCCATCATC	-4	True	NA	NA	False	NA	NA	NA	156601479	156597467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156598122_156598226_156598320_156598420_156598495_156598967_156599105_156601408
H1_mix_00007329	chr1	-	3408	1	Genic_Genomic	ENSG00000132688.11	novel	NA	NA	NA	NA	5239	2	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGACTCTTCTTTCCCCCA	5239	False	NA	1	True	AATAAA	-22	NA	156672168	156668760	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_-_156668800_156672200
H1_mix_00007330	chr1	-	2795	4	NNC	ENSG00000143319.17	novel	2985	4	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_3	115.566238822398	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAATTATGTACAGTTT	-11	True	NA	-32	True	GATAAA	-14	NA	156728441	156721897	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_156723463_156724147_156724349_156726905_156727770_156728276
H1_mix_00007331	chr1	-	872	2	FSM	ENSG00000143319.17	ENST00000496538.1	872	2	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAGGGAAAAAGTCCTA	1447	False	NA	NA	False	NA	NA	NA	156727386	156723957	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156724349_156726905
H1_mix_00007332	chr1	-	635	2	FSM	ENSG00000143319.17	ENST00000470713.1	635	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACCATCCTCAGAAGAAT	1	True	NA	NA	False	AAGAAA	-11	NA	156728429	156727210	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156727770_156728353
H1_mix_00007333	chr1	-	594	2	FSM	ENSG00000143319.17	ENST00000469074.1	594	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAGAGCTCCCAGAAGAA	-11	True	NA	NA	False	NA	NA	NA	156728441	156727241	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156727809_156728414
H1_mix_00007338	chr1	-	5275	5	FSM	ENSG00000117036.12	ENST00000368192.9	5282	5	11	-4	11	4	multi-exon	FALSE	canonical	0	0	junction_1	2.58602010819715	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGAGTTGGTTTTGTT	594	False	NA	-1	True	AATAAA	-22	NA	157138384	157121186	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_157125980_157134111_157134228_157135470_157135709_157136306_157136366_157138315
H1_mix_00007339	chr1	-	250	1	FSM	ENSG00000227295.2	ENST00000413990.1	1906	1	1636	20	1636	-20	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGCAGGCAGAGTCATGG	1527	False	NA	NA	False	NA	NA	NA	158176119	158175869	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_158175900_158176100
H1_mix_00007340	chr1	-	535	1	FSM	ENSG00000233473.2	ENST00000446414.2	663	1	92	36	92	-36	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCCTGATGATGAAGTTC	NA	False	NA	NA	False	AATGAA	-33	NA	159081703	159081168	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_159081200_159081700
H1_mix_00007341	chr1	-	281	3	FSM	ENSG00000213085.10	ENST00000475911.2	748	3	44	423	44	-423	multi-exon	FALSE	canonical	1	1	junction_1	1	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGCGCGGAAGAAGATG	9956	False	NA	NA	False	NA	NA	NA	159880656	159876685	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_159876750_159877348_159877463_159880553
H1_mix_00007342	chr1	-	1492	5	FSM	ENSG00000158710.15	ENST00000397334.2	801	5	33	-724	33	-3	multi-exon	FALSE	canonical	1	1	junction_4	341.928720642183	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGACTCTGGCTGTGTC	4347	False	NA	-12	True	AATAAA	-16	NA	159925196	159918113	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_159918942_159919273_159919377_159919660_159919836_159920329_159920538_159925018
H1_mix_00007343	chr1	-	5109	4	NNC	ENSG00000132716.19	novel	738	4	NA	NA	-881	35020	intron_retention	FALSE	non_canonical	0	0	junction_1	414.887401056667	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAGAAGGCAGAGTCAGG	1	True	NA	NA	False	NA	NA	NA	160221815	160180694	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_160180735_160215723_160217709_160218323_160218441_160218848
H1_mix_00007344	chr1	-	5073	3	FSM	ENSG00000132716.19	ENST00000476033.5	945	3	-2501	-1627	-881	0	multi-exon	FALSE	canonical	3	872	junction_1	8	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCTCTGTGTGGTATG	1	True	NA	-9	True	AGTAAA	-17	NA	160221815	160215719	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_160217709_160218323_160218441_160218848
H1_mix_00007345	chr1	-	7448	12	NIC	ENSG00000132716.19	novel	3867	14	NA	NA	444	0	intron_retention	FALSE	canonical	3	211	junction_11	188.541684892622	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCTCTGTGTGGTATG	1194	False	NA	-9	True	AGTAAA	-17	NA	160261358	160215719	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_160217709_160218323_160218441_160218848_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160261284
H1_mix_00007346	chr1	-	573	4	FSM	ENSG00000132716.19	ENST00000473382.2	573	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	386.606891931441	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGTTTTTGACCTTTTCT	2958	False	NA	NA	False	NA	NA	NA	160218858	160217161	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_160217477_160217577_160217709_160218323_160218441_160218848
H1_mix_00007347	chr1	-	876	7	FSM	ENSG00000132716.19	ENST00000490368.5	876	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	381.126838029896	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGCTTTAGATAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	160224528	160217485	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_160217709_160218323_160218441_160218848_160218969_160220458_160220533_160221086_160221211_160222650_160222782_160224441
H1_mix_00007357	chr1	-	1419	4	NNC	ENSG00000117091.10	novel	1097	4	NA	NA	25126	-6	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	5.31245915016974	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAATTCCTGAAGTTGTC	NA	False	NA	-5	True	AATAAA	-23	NA	160686677	160678751	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_160679132_160681201_160681469_160684886_160685190_160686208
H1_mix_00007358	chr1	-	1262	9	NNC	ENSG00000158764.7	novel	1161	8	NA	NA	-200	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	37.387957620068	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTATGTTTCTTTGAATTC	NA	False	NA	-5	True	ACTAAA	-17	NA	160955009	160945024	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_160945293_160947928_160948033_160950045_160950167_160950552_160950712_160951042_160951291_160952619_160952731_160954386_160954451_160954726_160954847_160954942
H1_mix_00007359	chr1	-	1092	11	FSM	ENSG00000158773.14	ENST00000473969.6	1092	11	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_7	4.10365690573664	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGGGATTCAGGGGCTT	13	True	NA	NA	False	NA	NA	NA	161045962	161039919	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161040010_161040201_161040331_161040575_161040671_161040813_161040873_161041323_161041412_161041650_161041847_161042115_161042218_161042585_161042671_161042832_161042883_161043267_161043361_161045857
H1_mix_00007361	chr1	-	617	5	NNC	ENSG00000143256.5	novel	598	4	NA	NA	0	14860	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	581.86446016233	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGCGAAGTTCAGAACTG	4	True	NA	NA	False	AAAAAG	-2	NA	161118037	161085695	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_161085715_161100560_161100860_161102047_161102172_161102286_161102376_161117951
H1_mix_00007362	chr1	-	403	2	FSM	ENSG00000143256.5	ENST00000468311.1	408	2	0	5	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAGCTGTAGCCTGAAGT	-14	True	NA	-6	True	ATTAAA	-15	NA	161118055	161100560	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161100860_161117951
H1_mix_00007363	chr1	-	2808	6	NNC	ENSG00000158796.17	novel	2344	6	NA	NA	120	-305	intron_retention	FALSE	canonical	1	2	junction_5	141.779547185058	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAGTGAAGTAATTCCTT	749	False	NA	40	True	NA	NA	NA	161132031	161121281	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_161122524_161123074_161123222_161123838_161123947_161124137_161124527_161130814_161130848_161131142
H1_mix_00007364	chr1	-	3178	5	FSM	ENSG00000158850.15	ENST00000470882.5	3178	5	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_3	23.466731770743	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCTCCTGCTTTCTGCA	551	False	NA	-28	True	AATAAA	-15	NA	161177420	161171310	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161172090_161172226_161172332_161173604_161174050_161174992_161175229_161175807
H1_mix_00007365	chr1	-	1895	8	NNC	ENSG00000158850.15	novel	2414	8	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	115.990675205785	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGCATCTGCTCCTGCTTT	492	False	NA	-33	True	AATAAA	-10	NA	161177479	161171315	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_161172065_161172226_161172332_161173604_161173728_161173858_161174050_161174992_161175229_161175807_161176096_161176433_161176580_161177422
H1_mix_00007369	chr1	-	507	5	NNC	ENSG00000158874.11	novel	474	4	NA	NA	0	38824	intron_retention	FALSE	non_canonical	0	0	junction_1	906.355614535487	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCAGGTGTGCTTGTGC	-2	True	NA	NA	False	NA	NA	NA	161223628	161183467	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_161183501_161222291_161222523_161222917_161223051_161223349_161223426_161223594
H1_mix_00007370	chr1	-	507	5	NNC	ENSG00000158874.11	novel	416	5	NA	NA	0	38824	intron_retention	FALSE	non_canonical	0	0	junction_1	906.355614535487	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCAGGTGTGCTTGTGC	-2	True	NA	NA	False	NA	NA	NA	161223628	161183467	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_161183504_161222294_161222523_161222917_161223051_161223349_161223426_161223594
H1_mix_00007371	chr1	-	421	4	FSM	ENSG00000158874.11	ENST00000468465.5	421	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	870.528702698666	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGAGCCTGGTATGTTT	-5	True	NA	-14	True	AATAAA	-16	NA	161223631	161222291	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161222523_161222917_161222995_161223349_161223426_161223594
H1_mix_00007373	chr1	-	774	5	FSM	ENSG00000188931.4	ENST00000367974.2	774	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	1.58113883008419	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGATCTGGATTTTCCAT	2	True	NA	-1	True	AATAAA	-21	NA	161367876	161364732	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161365151_161365525_161365703_161366197_161366279_161366438_161366502_161367841
H1_mix_00007374	chr1	-	561	4	FSM	ENSG00000143248.13	ENST00000525894.5	541	4	0	-20	0	20	multi-exon	FALSE	canonical	3	926	junction_2	39.1095327964367	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCTATTTGTGAGTCGA	-2	True	NA	NA	False	NA	NA	NA	163202915	163152452	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_163152717_163161914_163161977_163168257_163168369_163202791
H1_mix_00007376	chr1	-	1934	10	FSM	ENSG00000143171.13	ENST00000359842.10	1966	10	0	32	0	-31	multi-exon	FALSE	canonical	1	1	junction_6	1.4229164972073	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAGTAATAAAATAATATGT	-16	True	NA	-33	True	TTTAAA	-34	NA	165445126	165400953	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_165401411_165406811_165406918_165408226_165408319_165409557_165409691_165410701_165410832_165410948_165411110_165417040_165417221_165419869_165420015_165428718_165428967_165444844
H1_mix_00007377	chr1	-	899	5	FSM	ENSG00000143149.13	ENST00000461664.5	899	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	191.102721069063	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGGACAAAACCAGTATT	49	False	NA	NA	False	NA	NA	NA	165698540	165680486	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_165680684_165682106_165682242_165682980_165683111_165695251_165695398_165698249
H1_mix_00007379	chr1	-	1366	7	NIC	ENSG00000143183.18	novel	1912	7	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	56	junction_6	234.043739976574	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGAGAGATCTGTTTCAT	7	True	NA	-7	True	AATAAA	-29	NA	165768868	165727540	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_165728122_165743166_165743312_165752101_165752170_165754227_165754275_165759524_165759585_165768191_165768270_165768481
H1_mix_00007381	chr1	-	2117	9	NNC	ENSG00000152382.6	novel	2096	8	NA	NA	0	73952	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	135.845442967366	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGAGTCAAGACCC	-13	True	NA	NA	False	NA	NA	NA	166876264	166782557	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_166782583_166856513_166857720_166858118_166858282_166860185_166860338_166862202_166862413_166863823_166863922_166869444_166869511_166869762_166869855_166876159
H1_mix_00007382	chr1	-	2539	4	FSM	ENSG00000152382.6	ENST00000467021.1	2539	4	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_2	9.62635271879577	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTTGTTTATTAAACAT	NA	False	NA	-3	True	AATAAA	-16	NA	166863216	166856509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_166857720_166858118_166858282_166860185_166860338_166862202
H1_mix_00007383	chr1	-	1074	6	FSM	ENSG00000198821.11	ENST00000476733.5	1074	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	2.48193472919817	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCTAGGCCAGGTGCAAC	NA	False	NA	NA	False	NA	NA	NA	167439621	167431160	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_167431747_167433023_167433060_167434019_167434077_167435398_167435435_167438569_167438651_167439343
H1_mix_00007384	chr1	-	1090	6	FSM	ENSG00000198821.11	ENST00000470379.1	1078	6	0	-12	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1.93907194296653	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCTAGGCCAGGTGCAAC	NA	False	NA	NA	False	NA	NA	NA	167439640	167431160	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_167431747_167433023_167433060_167434019_167434077_167435398_167435432_167438569_167438651_167439343
H1_mix_00007385	chr1	-	2057	5	NNC	ENSG00000143162.9	novel	1969	4	NA	NA	-17	1343	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	123.926137275395	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAGTTACTGATATGTCA	NA	False	NA	NA	False	AAAAAG	-4	NA	167553822	167527773	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_167527802_167541012_167542302_167546100_167546286_167548001_167548122_167553387
H1_mix_00007386	chr1	-	859	6	NNC	ENSG00000143158.11	novel	2177	5	NA	NA	2	62844	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	225.23996093056	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAACTATAGTAGAAATGAA	-16	True	NA	NA	False	NA	NA	NA	167936038	167853830	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_167853857_167918070_167918360_167919978_167920091_167920546_167920632_167924496_167924538_167935732
H1_mix_00007387	chr1	-	862	6	NNC	ENSG00000143158.11	novel	2177	5	NA	NA	0	62844	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	225.23996093056	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAACTATAGTAGAAATGAA	-18	True	NA	NA	False	NA	NA	NA	167936040	167853830	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_167853857_167918069_167918360_167919978_167920091_167920546_167920632_167924496_167924538_167935732
H1_mix_00007388	chr1	-	2172	6	FSM	ENSG00000143158.11	ENST00000271373.9	2223	6	63	-12	63	12	multi-exon	FALSE	canonical	2	8	junction_5	222.103939631876	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCAAATTTGTTGTAGCAT	5	True	NA	54	True	ATTAAA	-38	NA	167937009	167916662	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_167918360_167919978_167920091_167920546_167920632_167924496_167924538_167935732_167935899_167936938
H1_mix_00007389	chr1	-	7858	6	FSM	ENSG00000143147.15	ENST00000271357.9	7806	6	-55	3	39	-3	multi-exon	FALSE	canonical	2	7	junction_5	38.4884398228871	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATACTGTGGAAATGGTG	55	False	NA	-33	True	ATTAAA	-16	NA	168137628	168079545	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_168085797_168087584_168087705_168090563_168090669_168096507_168097233_168104476_168104895_168137389
H1_mix_00007390	chr1	-	2059	7	FSM	ENSG00000143147.15	ENST00000367835.1	2400	7	353	-12	-300	0	multi-exon	FALSE	canonical	1	3	junction_6	41.1055551801294	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATCTAGAGATGT	453	False	NA	-15	True	NA	NA	NA	168137230	168085265	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_168085797_168087584_168087705_168090563_168090669_168096507_168097233_168104476_168104895_168114455_168114550_168137164
H1_mix_00007391	chr1	-	1381	3	FSM	ENSG00000143147.15	ENST00000493800.1	1381	3	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_2	0.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGGGGGTGAGAATCATA	3575	False	NA	NA	False	NA	NA	NA	168104909	168090445	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_168090669_168096507_168097233_168104476
H1_mix_00007392	chr1	-	631	7	FSM	ENSG00000143156.14	ENST00000483228.5	631	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	140.010019482734	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAATCTTTGGTAAAACT	NA	False	NA	NA	False	NA	NA	NA	169310071	169169520	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_169169555_169230717_169230820_169235130_169235200_169237622_169237688_169298555_169298764_169303144_169303196_169309969
H1_mix_00007395	chr1	-	1775	6	NIC	ENSG00000117477.13	novel	1917	6	NA	NA	107	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	24.5324275195098	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGTTGTGCCATCTCT	99	False	NA	-3	True	AATAAA	-20	NA	169427355	169394872	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_169395207_169397236_169397392_169419012_169419160_169421362_169422314_169424810_169424931_169427287
H1_mix_00007396	chr1	-	3648	2	FSM	ENSG00000117479.15	ENST00000643377.1	3133	2	-145	-370	-145	347	multi-exon	FALSE	canonical	3	173	junction_1	0	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATTAAAGCAAGAGCAGAA	NA	False	NA	NA	False	AATAAA	-3	NA	169469342	169463561	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_169465978_169468110
H1_mix_00007397	chr1	-	5588	5	NIC	ENSG00000117479.15	novel	3612	6	NA	NA	122	1	intron_retention	FALSE	canonical	3	152	junction_3	25.5281707139387	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCTCTTTTTAATCAA	152	False	NA	-18	True	AATAAA	-13	NA	169485809	169463930	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_169468253_169468643_169468837_169469963_169470187_169477154_169477758_169485562
H1_mix_00007398	chr1	-	1949	2	NNC	ENSG00000171806.12	novel	1426	2	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGTGTTTGATTTCTGT	254	False	NA	-4	True	AATAAA	-16	NA	169794656	169792528	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_169793898_169794076
H1_mix_00007399	chr1	-	2925	13	NIC	ENSG00000000457.14	novel	6308	13	NA	NA	0	-29	combination_of_known_junctions	FALSE	canonical	3	7	junction_7	11.8001294719827	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTTCACTAGATTCAAC	25	True	NA	-29	True	AATAAA	-3	NA	169893896	169853102	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_169853773_169854269_169854965_169859040_169859213_169862612_169862798_169864368_169864509_169866895_169866974_169868927_169869129_169870254_169870358_169873695_169873753_169875977_169876092_169878633_169878820_169888675_169888891_169893787
H1_mix_00007401	chr1	-	399	1	FSM	ENSG00000233328.3	ENST00000442087.2	423	1	69	-45	69	45	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTCCCTCCCCATACAC	218	False	NA	NA	False	NA	NA	NA	171670870	171670471	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_171670500_171670900
H1_mix_00007402	chr1	-	1968	5	NNC	ENSG00000203739.5	novel	1662	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	9.90896059130321	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTGGAGCCTGTAGCTT	-21	True	NA	-2	True	AATAAA	-23	NA	173477171	173417792	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_173418623_173440462_173440751_173441918_173442098_173462323_173462455_173476631
H1_mix_00007410	chr1	-	542	11	FSM	ENSG00000234741.9	ENST00000449289.6	543	11	0	1	0	0	multi-exon	FALSE	canonical	3	67	junction_4	917.109677192428	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTGTGTAGTGTTTAC	-2	True	NA	-11	True	AATAAA	-15	NA	173867989	173863899	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865509_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
H1_mix_00007411	chr1	-	621	3	FSM	ENSG00000234741.9	ENST00000454813.1	621	3	0	0	0	0	multi-exon	FALSE	canonical	3	2781	junction_1	9	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGAGTGTGTAGTGTTT	3116	False	NA	-13	True	AATAAA	-13	NA	173864871	173863901	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_173864076_173864256_173864507_173864674
H1_mix_00007416	chr1	-	3775	19	FSM	ENSG00000135870.12	ENST00000367694.2	3775	19	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	5.78124895729053	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGATATTATATATA	NA	False	NA	NA	False	AATGAA	-45	NA	173993072	173938410	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_173938875_173941264_173941381_173943441_173943589_173946475_173946609_173946745_173946837_173947368_173947583_173951985_173952139_173961076_173961245_173961724_173962096_173963972_173964188_173964838_173965121_173970504_173970618_173972508_173972628_173978487_173978621_173980808_173981010_173982726_173982903_173983417_173983658_173984498_173984620_173992754
H1_mix_00007418	chr1	-	4633	4	FSM	ENSG00000235750.10	ENST00000444639.5	4494	4	-138	-1	-82	0	multi-exon	FALSE	canonical	3	7	junction_3	25.0377492776186	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGTCTGCCATATTTCT	0	True	NA	-2	True	AATAAA	-21	NA	175193081	175156985	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_175161147_175166561_175166738_175177610_175177685_175192859
H1_mix_00007419	chr1	-	2787	20	NIC	ENSG00000143207.21	novel	2826	20	NA	NA	28	1	combination_of_known_junctions	FALSE	canonical	3	87	junction_16	98.914580233783	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGCTTGGAAAGTTTTTG	2	True	NA	-3	True	AATAAA	-39	NA	176207258	175944829	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_175945171_175947194_175947240_175986942_175987104_175988287_175988413_175989361_175989480_176027571_176027689_176043185_176043268_176043709_176043819_176046180_176046325_176081151_176081288_176085775_176085891_176116623_176116682_176135009_176135087_176136487_176136548_176149005_176149075_176162868_176162989_176163826_176163892_176175909_176176008_176184632_176184693_176206571
H1_mix_00007421	chr1	-	2414	17	NNC	ENSG00000152092.16	novel	3685	22	NA	NA	8980	66112	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4.81168824322607	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAATTCT	9044	False	NA	NA	False	NA	NA	NA	177023570	176791189	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_176791204_176868819_176869028_176876536_176876638_176882858_176882995_176884338_176884491_176888070_176888205_176894561_176894831_176934151_176934341_176936265_176936371_176943890_176944019_176945925_176946121_176949184_176949352_176957677_176957829_176958344_176958483_176965162_176965238_177014790_177014876_177023403
H1_mix_00007422	chr1	-	1444	6	ISM	ENSG00000152092.16	ENST00000281881.7	2991	15	112	88540	6	-48541	5prime_fragment	FALSE	canonical	3	12	junction_4	4.71593044902064	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGCTGATGGTGAGCCTG	357	False	NA	NA	False	NA	NA	NA	177164861	177024593	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_177024733_177029633_177029742_177030805_177030953_177032455_177032850_177061077_177061266_177164393
H1_mix_00007423	chr1	-	11464	12	ISM	ENSG00000143322.21	ENST00000344730.7	6910	13	9722	-4718	829	0	3prime_fragment	FALSE	canonical	2	4	junction_11	2.00412797136805	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGCTGGAGATTGGAGTG	9702	False	NA	-9	True	AATAAA	-24	NA	179133367	179099329	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_179108899_179109207_179109442_179110281_179110456_179112308_179112399_179114877_179115031_179117331_179117517_179118586_179118765_179120189_179120275_179121594_179121868_179126376_179126673_179131310_179131482_179133311
H1_mix_00007424	chr1	-	11931	12	FSM	ENSG00000143322.21	ENST00000507173.5	3177	12	-279	-8475	1	87	multi-exon	TRUE	canonical	2	5	junction_2	1.72966341731277	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTATAAGGTAAAGAAGCTG	8	True	NA	78	True	NA	NA	NA	179229676	179099242	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_179108899_179109207_179109442_179110281_179110456_179112308_179112399_179114877_179115031_179117331_179117517_179118586_179118765_179120189_179120275_179121594_179121868_179126376_179126673_179131310_179131482_179229240
H1_mix_00007427	chr1	-	562	2	FSM	ENSG00000230124.8	ENST00000622400.1	562	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGACTTGATTAAGGCAAAT	NA	False	NA	NA	False	NA	NA	NA	180274713	180273613	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_180274113_180274650
H1_mix_00007428	chr1	-	4721	6	FSM	ENSG00000135823.14	ENST00000542060.5	4809	6	88	0	88	0	multi-exon	FALSE	canonical	3	14	junction_5	130.348762940045	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACTGAATTACTAGAATGA	NA	False	NA	-22	True	AATAAA	-29	NA	181023033	180972711	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_180976647_180984676_180984772_180988238_180988346_180989983_180990110_180993362_180993426_181022638
H1_mix_00007434	chr1	-	1857	8	FSM	ENSG00000116406.20	ENST00000474725.5	1911	8	16	38	1	-38	multi-exon	FALSE	canonical	1	3	junction_7	28.407386219727	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAGCGAAACTCCGTCTC	-14	True	NA	NA	False	NA	NA	NA	184754857	184720547	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_184721387_184723750_184723857_184726254_184726390_184732836_184732991_184734530_184734644_184737024_184737065_184737610_184737712_184754488
H1_mix_00007435	chr1	-	812	4	FSM	ENSG00000121486.12	ENST00000458395.1	735	4	0	-77	0	77	multi-exon	FALSE	canonical	3	181	junction_2	10.3387082795139	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAATCAGGCCTGAGATGA	NA	False	NA	NA	False	NA	NA	NA	185139560	185124762	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_185125111_185128668_185128748_185137605_185137797_185139366
H1_mix_00007437	chr1	-	3824	8	FSM	ENSG00000116679.16	ENST00000480769.5	3776	8	0	-48	0	48	multi-exon	TRUE	canonical	3	1477	junction_7	66.7954538352815	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATGGGAATACTTTGGG	8905	False	NA	36	True	NA	NA	NA	185306500	185296339	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_185298289_185299709_185299884_185299998_185300131_185300216_185300344_185300436_185300559_185300971_185301197_185301433_185301564_185305535
H1_mix_00007442	chr1	-	4318	2	Antisense	novelGene_ENSG00000143341.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGGTGTGGTGGCATAT	NA	False	NA	NA	False	NA	NA	NA	185952590	185858584	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr1_-_185858631_185948318
H1_mix_00007444	chr1	-	265	1	FSM	ENSG00000226723.2	ENST00000431492.2	780	1	520	-5	520	5	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTCTGAGAATATTGATAA	NA	False	NA	NA	False	NA	NA	NA	192246967	192246702	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_192246700_192247000
H1_mix_00007445	chr1	-	1738	12	NIC	ENSG00000116750.14	novel	1355	12	NA	NA	1	-7	combination_of_known_junctions	FALSE	canonical	3	60	junction_1	185.416172500657	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTAAATTTTCTTCAAGTG	16	True	NA	-22	True	AATAAA	-17	NA	193059348	193015765	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_193016396_193020306_193020382_193021096_193021196_193022925_193023040_193023843_193023947_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
H1_mix_00007448	chr1	-	2265	12	FSM	ENSG00000116750.14	ENST00000367448.5	1534	12	-48	-683	0	683	multi-exon	FALSE	canonical	3	53	junction_1	178.673024227993	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTGCTCATTTAATTA	669	False	NA	2	True	AATAAA	-23	NA	193059409	193017721	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_193018821_193020306_193020382_193021096_193021196_193022925_193023037_193023843_193023947_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
H1_mix_00007449	chr1	-	1449	11	NIC	ENSG00000116750.14	novel	1507	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	68	junction_1	157.793409241324	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTGAGACTTCTATTT	16	True	NA	NA	False	AATAAA	-20	NA	193059348	193018404	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_193018821_193021096_193021196_193022925_193023040_193023843_193023947_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
H1_mix_00007453	chr1	-	666	2	NNC	ENSG00000023572.10	novel	5612	5	NA	NA	-71435	-266	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTCATTCGATGTTAAA	9064	False	NA	NA	False	NA	NA	NA	193177549	193091131	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_193091777_193177528
H1_mix_00007454	chr1	-	6540	27	NNC	ENSG00000162687.19	novel	6094	30	NA	NA	0	3051	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	9.09458841628023	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGATGTGACTGCTGA	17	True	NA	NA	False	AGTAAA	-2	NA	196608411	196255037	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_196258495_196273467_196273489_196280859_196280989_196282272_196282357_196285656_196285759_196305233_196305346_196315891_196316027_196317147_196317270_196326716_196326890_196331155_196331262_196333846_196334061_196340340_196340571_196342078_196342229_196373139_196373249_196398562_196398672_196423049_196423114_196425851_196425989_196428104_196428270_196429576_196429758_196465292_196465388_196467702_196467787_196468993_196469069_196479178_196479239_196482330_196482380_196489837_196489938_196492261_196492342_196608214
H1_mix_00007455	chr1	-	2315	2	ISM	ENSG00000066279.19	ENST00000367408.6	3924	18	41157	6	41157	0	intron_retention	FALSE	canonical	3	168	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATTATTCCTGTCTATT	2039	False	NA	40	True	AATAAA	-20	NA	197088817	197084126	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_197084427_197086802
H1_mix_00007456	chr1	-	725	4	FSM	ENSG00000118197.14	ENST00000429498.5	725	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	35.2357142052713	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATTTATTTCCCTTAAT	5941	False	NA	-4	True	AATAAA	-16	NA	200663964	200644120	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_200644518_200648438_200648568_200649073_200649227_200663918
H1_mix_00007460	chr1	-	500	2	FSM	ENSG00000234678.2	ENST00000415582.1	500	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGATCAACATGAAGTTC	9131	False	NA	-14	True	AATAAA	-15	NA	202001283	202000100	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_202000328_202001010
H1_mix_00007462	chr1	-	1487	6	FSM	ENSG00000077152.11	ENST00000646595.1	1499	6	12	0	1	0	multi-exon	FALSE	canonical	3	1044	junction_5	164.213763125994	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGTTTATCCTGAATG	7331	False	NA	-2	True	AATAAA	-18	NA	202341958	202331656	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_202331961_202333009_202333094_202333236_202333336_202333449_202333556_202334988_202335819_202341894
H1_mix_00007463	chr1	-	9485	26	FSM	ENSG00000117139.18	ENST00000648338.1	9485	26	0	0	0	0	multi-exon	FALSE	canonical	3	838	junction_20	104.076310464966	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACCAAAACTTTTAGCTCC	3	True	NA	NA	False	AATAAA	-22	NA	202808473	202724886	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_202730028_202730908_202731064_202731827_202731940_202733400_202733887_202735428_202735588_202736212_202736393_202740673_202740813_202741366_202741723_202742390_202742506_202742654_202742806_202745857_202745983_202746141_202746324_202748944_202749140_202750658_202750779_202752904_202753068_202755270_202755453_202756357_202756517_202758390_202758511_202760414_202760574_202762698_202762809_202764048_202764146_202766925_202767061_202773117_202773289_202774612_202774736_202777016_202777095_202808101
H1_mix_00007465	chr1	-	6642	26	FSM	ENSG00000117139.18	ENST00000647757.1	6678	26	36	0	33	0	multi-exon	FALSE	canonical	2	7	junction_25	224.105596538775	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGACTTCTAGTTGTC	-10	True	NA	31	True	ATTAAA	-8	NA	202808016	202727411	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_202730028_202730908_202731064_202731827_202731940_202733400_202733887_202735428_202735588_202736212_202736393_202740673_202740813_202741366_202741723_202742390_202742506_202742654_202742806_202745857_202745983_202746141_202746324_202748944_202749140_202750658_202750779_202752904_202753068_202755270_202755453_202756357_202756517_202758390_202758511_202760414_202760574_202762698_202762809_202764048_202764146_202766925_202767061_202773117_202773289_202774612_202774736_202777016_202777095_202807962
H1_mix_00007467	chr1	-	5919	26	FSM	ENSG00000117139.18	ENST00000649770.1	5919	26	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	290.039291131391	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCATAGCTATTTTCCTT	-4	True	NA	NA	False	NA	NA	NA	202808421	202727674	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_202729104_202729706_202730028_202730908_202731064_202731827_202731940_202733400_202733887_202735428_202735588_202736212_202736393_202740673_202740813_202741366_202741723_202742390_202742506_202742654_202742806_202745857_202745983_202746141_202746324_202748944_202749140_202750658_202750779_202752904_202753068_202755270_202755453_202756357_202756517_202758390_202758511_202760414_202760574_202762698_202762809_202764048_202764146_202766925_202767061_202773117_202773289_202777016_202777095_202808101
H1_mix_00007480	chr1	-	899	3	FSM	ENSG00000159348.13	ENST00000478009.1	899	3	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	10	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGGGCTAGGAAGGGAC	46	False	NA	NA	False	NA	NA	NA	202967225	202965886	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_202966601_202966748_202966899_202967190
H1_mix_00007483	chr1	-	593	2	ISM	ENSG00000170498.10	ENST00000367194.5	714	3	3577	5	3577	-5	3prime_fragment	FALSE	canonical	2	2	junction_1	0	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTGACGTGTGGTCTG	3716	False	NA	-5	True	AATAAA	-15	NA	204192914	204190345	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_204190798_204192773
H1_mix_00007485	chr1	-	1594	4	NIC	ENSG00000174567.8	novel	776	5	NA	NA	-125	-5	intron_retention	FALSE	canonical	3	54	junction_1	4.49691252107735	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTCTAAGGCTCAGAGT	NA	False	NA	-11	True	ATTAAA	-15	NA	204214113	204198167	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_204199259_204201632_204201812_204202895_204202988_204213881
H1_mix_00007486	chr1	-	7470	23	NNC	ENSG00000143850.16	novel	7412	23	NA	NA	-9946	0	at_least_one_novel_splicesite	TRUE	canonical	3	29	junction_6	11.7043468650408	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGGTGTGTGTCTCCTA	-20	True	NA	-19	True	AATAAA	-15	NA	204288335	204218852	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_204222780_204223461_204223586_204228082_204228229_204228727_204228862_204228936_204229105_204230412_204230590_204241374_204241482_204241684_204241815_204244863_204245004_204245614_204245727_204247364_204247461_204248820_204248971_204249183_204249265_204250545_204250615_204257352_204257870_204259257_204259741_204261305_204261509_204264941_204265043_204267474_204267548_204268207_204268313_204273625_204273741_204274728_204274810_204288104
H1_mix_00007488	chr1	-	352	3	ISM	ENSG00000143850.16	ENST00000637508.1	5704	27	-182	52955	-182	-85	5prime_fragment	FALSE	canonical	2	4	junction_2	29	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAAACGCCCGGCTACCA	7122	False	NA	NA	False	AATAAA	-6	NA	204307577	204273710	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_204273741_204274728_204274810_204307336
H1_mix_00007489	chr1	-	318	1	FSM	ENSG00000219133.2	ENST00000403842.2	483	1	191	-26	191	26	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGAGAAATATCGCTGAAT	3930	False	NA	NA	False	AAAAAG	-5	NA	204347067	204346749	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_204346700_204347100
H1_mix_00007492	chr1	-	553	4	FSM	ENSG00000162873.15	ENST00000606181.1	606	4	53	0	53	0	multi-exon	FALSE	canonical	3	17	junction_1	2.49443825784929	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATGCCCACACCCCGCT	4711	False	NA	NA	False	NA	NA	NA	205339808	205337522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_205337593_205338494_205338597_205339193_205339410_205339643
H1_mix_00007493	chr1	-	6454	3	FSM	ENSG00000281406.2	ENST00000626538.2	6454	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTTGCAGTAAATGGATT	350	False	NA	NA	False	AATAAA	-16	NA	205456746	205434884	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_205441063_205455916_205456036_205456589
H1_mix_00007494	chr1	-	339	1	FSM	ENSG00000199059.3	ENST00000362189.3	97	1	80	-322	80	322	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCAAGGGCCTCAGGC	8778	False	NA	NA	False	NA	NA	NA	205448318	205447979	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_205448000_205448300
H1_mix_00007496	chr1	-	3179	6	NNC	ENSG00000117280.13	novel	1723	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_5	37.349163310575	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGGTGGTTATTGGCCT	19	True	NA	-12	True	AATAAA	-19	NA	205775449	205767985	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_205770454_205770732_205770855_205771471_205771654_205772495_205772568_205774832_205775092_205775373
H1_mix_00007499	chr1	-	1456	4	FSM	ENSG00000117280.13	ENST00000446390.6	1441	4	0	-15	0	0	multi-exon	FALSE	canonical	2	9	junction_3	50.334437073991	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCAGCACTTGGGGAGG	235	False	NA	NA	False	NA	NA	NA	205775233	205769702	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_205770454_205770732_205770855_205771471_205771654_205774832
H1_mix_00007502	chr1	-	843	2	FSM	ENSG00000133065.11	ENST00000484000.1	843	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTGATTGAGTCTCGGG	9	True	NA	NA	False	GGGGCT	-9	NA	205813748	205810298	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_205811088_205813694
H1_mix_00007504	chr1	-	2804	3	FSM	ENSG00000076356.7	ENST00000483048.1	2860	3	56	0	56	0	multi-exon	FALSE	canonical	3	46	junction_2	0.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAACAAAAATCAA	NA	False	NA	NA	False	NA	NA	NA	208030247	208026103	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_208027339_208028008_208028160_208028829
H1_mix_00007506	chr1	-	285	2	FSM	ENSG00000259815.1	ENST00000567538.1	285	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGATGCTCTGTGGTATAG	NA	False	NA	NA	False	ATTAAA	-21	NA	208628085	208626740	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_208626914_208627973
H1_mix_00007507	chr1	-	434	3	FSM	ENSG00000232537.2	ENST00000416349.1	473	3	0	39	0	-32	multi-exon	FALSE	canonical	1	1	junction_2	1	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTATGATTTGATAAATG	NA	False	NA	-38	True	NA	NA	NA	209155101	209147305	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_209147595_209151404_209151506_209155057
H1_mix_00007509	chr1	-	334	2	Intergenic	novelGene_138	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	108	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGACTATAGTTAATGATGT	NA	False	NA	NA	False	NA	NA	NA	209453885	209448804	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_-_209448990_209453736
H1_mix_00007511	chr1	-	4303	7	FSM	ENSG00000117595.12	ENST00000542854.5	4256	7	3	-50	3	44	multi-exon	FALSE	canonical	3	9	junction_6	34.8743777324015	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAACCAGACAGCCTTAG	NA	False	NA	42	True	NA	NA	NA	209806172	209785572	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_209788645_209789666_209789786_209790494_209790888_209792268_209792428_209795289_209795419_209796347_209796553_209805946
H1_mix_00007513	chr1	-	2098	8	NIC	ENSG00000117650.13	novel	2134	8	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	56.7964500184112	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATGTGTCTTGCATTTGT	17	False	NA	0	True	AATAAA	-23	NA	211675609	211662771	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_211663629_211667105_211667232_211669112_211669333_211670280_211670408_211671201_211671285_211673482_211673724_211674295_211674514_211675383
H1_mix_00007515	chr1	-	3380	20	FSM	ENSG00000143493.13	ENST00000366992.7	3380	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	47.070231019185	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAACTGGGATCCTGG	16	True	NA	-24	True	AATAAA	-18	NA	212035520	211941355	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_211942112_211944783_211944970_211946606_211946646_211952568_211952702_211966429_211966499_211967877_211967982_211968512_211968708_211975165_211975373_211976581_211976720_211978271_211978512_211981092_211981191_211982675_211982811_211987885_211988004_212006638_212006762_212007249_212007450_212011374_212011422_212016885_212017024_212020121_212020269_212021082_212021213_212035343
H1_mix_00007516	chr1	-	3136	19	FSM	ENSG00000143493.13	ENST00000440600.6	3136	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	62.2085550466144	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATTAGCCAAGCATG	-3	True	NA	NA	False	ACTAAA	-7	NA	212035539	211941531	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_211942112_211944783_211944970_211946606_211946706_211952568_211952702_211966429_211966499_211967877_211967982_211968512_211968708_211975165_211975373_211976581_211976720_211978271_211978512_211981092_211981191_211982675_211982811_211987885_211988004_212006638_212006762_212007249_212007450_212011374_212011422_212016885_212017024_212021082_212021213_212035343
H1_mix_00007518	chr1	-	1344	5	FSM	ENSG00000117697.15	ENST00000366978.5	1344	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	183.296719828807	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTAGTCTGTTCTTTTCA	199	False	NA	0	True	AATAAA	-23	NA	212791581	212726152	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_212727180_212782371_212782427_212784362_212784494_212787558_212787638_212791529
H1_mix_00007520	chr1	-	911	3	NNC	ENSG00000198468.10	novel	942	2	NA	NA	0	27473	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	35	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCACACAGAAAAAGAAAACC	8	True	NA	NA	False	NA	NA	NA	212858083	212824631	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_212824661_212856608_212857173_212857765
H1_mix_00007521	chr1	-	308	2	Intergenic	novelGene_142	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTATTTTAGCCCTGAC	5140	False	NA	-20	True	AATAAA	-9	NA	212907237	212899519	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_-_212899707_212907116
H1_mix_00007523	chr1	-	250	2	FSM	ENSG00000042781.14	ENST00000463147.1	618	2	231	137	231	-137	multi-exon	FALSE	canonical	3	3	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACCAATTAAATGGATTGC	NA	False	NA	NA	False	AATGAA	-28	NA	216084877	216083516	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_216083587_216084697
H1_mix_00007524	chr1	-	454	5	FSM	ENSG00000092978.11	ENST00000470014.6	442	5	0	-12	0	12	multi-exon	FALSE	canonical	3	4	junction_1	12.0104121494643	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCTTGCATATAATCATAT	NA	False	NA	NA	False	NA	NA	NA	217610400	217492488	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_217492694_217495014_217495076_217498355_217498396_217514821_217514890_217610320
H1_mix_00007525	chr1	-	425	1	ISM	ENSG00000215817.8	ENST00000651890.1	4769	2	3629	1082	3629	-1082	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCAACTCAGGAAGCCTG	NA	False	NA	NA	False	TTTAAA	-36	NA	219609516	219609091	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_219609100_219609500
H1_mix_00007526	chr1	-	506	3	FSM	ENSG00000136628.18	ENST00000485821.1	598	3	1	91	1	-91	multi-exon	FALSE	canonical	3	752	junction_1	58.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAATATTCATTGTAGAGC	NA	False	NA	NA	False	NA	NA	NA	219984257	219982600	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_219982845_219983188_219983399_219984205
H1_mix_00007529	chr1	-	569	6	FSM	ENSG00000162813.18	ENST00000498237.3	569	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	19.0724932822114	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTAACAGTTCTTATTG	-10	True	NA	NA	False	NA	NA	NA	220089812	220067383	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_220067394_220069383_220069433_220072849_220072958_220073966_220074072_220079726_220079855_220089643
H1_mix_00007531	chr1	-	2589	4	FSM	ENSG00000143507.18	ENST00000366899.4	2589	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	3.29983164553722	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGGATGTGTCTTTTTTT	-3	True	NA	-16	True	TATAAA	-10	NA	221742089	221701423	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_221702678_221706094_221706467_221738933_221739788_221741980
H1_mix_00007533	chr1	-	361	2	NNC	ENSG00000276997.4	novel	319	2	NA	NA	-13934	-3035	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	0	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTGTGAGTAGCTCTG	NA	False	NA	NA	False	NA	NA	NA	222518556	222504372	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_222504602_222518424
H1_mix_00007534	chr1	-	2006	10	NIC	ENSG00000143498.18	novel	1910	11	NA	NA	0	-26	intron_retention	FALSE	canonical	3	23	junction_7	22.6175939382498	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCGACAGAACTAGACTC	161	False	NA	NA	False	NA	NA	NA	222589759	222557927	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_222558773_222561363_222561519_222563172_222563297_222564058_222564126_222569509_222569669_222570534_222570666_222577444_222577644_222584127_222584298_222588442_222588566_222589726
H1_mix_00007535	chr1	-	1963	12	FSM	ENSG00000143498.18	ENST00000350027.8	1966	12	3	0	3	0	multi-exon	FALSE	canonical	1	6	junction_1	27.8627094610771	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-10	True	NA	NA	False	NA	NA	NA	222589930	222557901	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_222558269_222558622_222558773_222561363_222561519_222563172_222563297_222564058_222564126_222569509_222569669_222570534_222570666_222577444_222577644_222579758_222579873_222584127_222584298_222588442_222588566_222589726
H1_mix_00007537	chr1	-	3043	8	NIC	ENSG00000143498.18	novel	1047	7	NA	NA	15	1406	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	31.3492505525105	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTAGTGGCATTAAGTA	49	False	NA	-1	True	AATAAA	-31	NA	222589871	222567422	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_222569425_222569509_222569669_222570534_222570666_222577444_222577644_222579758_222579873_222584127_222584298_222588442_222588566_222589726
H1_mix_00007538	chr1	-	255	1	FSM	ENSG00000229399.1	ENST00000413568.1	445	1	20	170	20	-170	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCGAGGATGCCAAGGACT	2885	False	NA	NA	False	NA	NA	NA	222641838	222641583	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_222641600_222641800
H1_mix_00007540	chr1	-	2935	14	NNC	ENSG00000272645.4	novel	2975	13	NA	NA	8	0	intron_retention	FALSE	canonical	1	3	junction_6	15.9035554805546	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTATTTGGAGTGAGTTT	-3	True	NA	-6	True	NA	NA	NA	223992586	223951393	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_223952292_223952384_223952443_223952667_223952868_223954476_223954668_223961167_223961233_223962076_223962274_223971573_223971764_223973981_223974047_223976879_223977116_223982757_223983286_223984381_223984441_223986574_223986641_223988044_223988155_223992514
H1_mix_00007541	chr1	-	504	1	FSM	ENSG00000236773.1	ENST00000415453.1	231	1	-9	-264	-9	264	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCATATTGTGTAAAATAAC	239	False	NA	NA	False	TATAAA	-32	NA	224175715	224175211	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_224175200_224175700
H1_mix_00007542	chr1	-	2892	24	NNC	ENSG00000143748.18	novel	3003	24	NA	NA	0	33384	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	66.9349485291023	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGGGCATGGCTGTGC	30	True	NA	NA	False	AATACA	-25	NA	224330132	224193949	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_224193976_224227335_224227671_224231225_224231297_224233200_224233290_224236505_224236583_224250211_224250319_224268033_224268134_224275338_224275459_224281122_224281186_224286025_224286131_224287774_224287994_224289483_224289734_224294266_224294412_224296500_224296619_224300561_224300664_224303722_224303858_224304735_224304813_224305033_224305167_224307990_224308264_224311799_224311858_224317693_224317794_224317877_224317931_224326390_224326465_224330070
H1_mix_00007543	chr1	-	591	4	FSM	ENSG00000143748.18	ENST00000481213.5	591	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	111.326347086193	1868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAAAGTTACAGAGATCT	NA	False	NA	-1	True	AATAAA	-29	NA	224233289	224227333	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_224227671_224231225_224231297_224232088_224232183_224233200
H1_mix_00007545	chr1	-	2832	22	FSM	ENSG00000143748.18	ENST00000391875.6	2832	22	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_21	30.3118336006885	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAAAGTTACAGAGATCT	-8	True	NA	-1	True	AATAAA	-29	NA	224330170	224227333	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_224227671_224231225_224231297_224233200_224233290_224236505_224236583_224250211_224250319_224268033_224268134_224275338_224275459_224281122_224281186_224286025_224286131_224287774_224287994_224289483_224289734_224294266_224294412_224296500_224296619_224300561_224300664_224303722_224303858_224304735_224304813_224305033_224305167_224307990_224308264_224311799_224311858_224317693_224317794_224317877_224317931_224330070
H1_mix_00007546	chr1	-	3081	25	NIC	ENSG00000143748.18	novel	3003	24	NA	NA	8	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_20	97.398094893529	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATTTTGACTATACAGAAA	2	True	NA	-15	True	AATAAA	-40	NA	224330160	224227347	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_224227671_224231225_224231297_224233200_224233290_224236505_224236583_224250211_224250319_224268033_224268134_224275338_224275459_224281122_224281186_224286025_224286131_224287774_224287994_224289483_224289734_224294266_224294412_224296500_224296619_224300561_224300664_224301690_224301772_224303722_224303858_224304735_224304813_224305033_224305167_224307990_224308264_224311799_224311858_224313033_224313152_224317693_224317794_224317877_224317931_224326390_224326465_224330070
H1_mix_00007548	chr1	-	612	3	ISM	ENSG00000233384.3	ENST00000437416.3	3958	4	405	3279	44	-521	3prime_fragment	FALSE	canonical	2	8	junction_1	3.5	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTTAACCCATAGAAGTA	NA	False	NA	-15	True	AATAAA	-11	NA	224615815	224611408	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_224611593_224615203_224615428_224615611
H1_mix_00007549	chr1	-	1546	3	Intergenic	novelGene_167	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	10.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAAGCCTGTTTAGTGGT	11	False	NA	-5	True	AATAAA	-16	NA	224845775	224839972	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_-_224840335_224843637_224844582_224845535
H1_mix_00007553	chr1	-	789	2	FSM	ENSG00000196187.12	ENST00000496025.1	789	2	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCAGTCCAGGTCTGAGG	NA	False	NA	4	True	NA	NA	NA	225847465	225846575	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_225846933_225847033
H1_mix_00007554	chr1	-	3070	24	NNC	ENSG00000196187.12	novel	4109	25	NA	NA	103	-39	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_23	64.1547043244416	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTTCTGAGCACACACAC	6868	False	NA	-35	True	AATATA	-34	NA	225882277	225846614	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_225846933_225847033_225847214_225848491_225848555_225848896_225849013_225849911_225850080_225852663_225852770_225853628_225853792_225855877_225855941_225856651_225856739_225856910_225857018_225859195_225859350_225860859_225860998_225862217_225862352_225862454_225862579_225862770_225862852_225865896_225865968_225867111_225867164_225867887_225868031_225871075_225871114_225871986_225872054_225874287_225874368_225877394_225877595_225879219_225879411_225882051
H1_mix_00007556	chr1	-	454	4	FSM	ENSG00000196187.12	ENST00000436966.1	454	4	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_2	17.4419672692682	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTTCCGTCTGCAGTGA	9959	False	225877694	NA	False	NA	NA	NA	225877679	225871091	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_225871114_225871986_225872054_225874287_225874368_225877394
H1_mix_00007558	chr1	-	4016	8	NNC	ENSG00000143751.10	novel	3987	7	NA	NA	0	14041	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	53.3678034865554	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCAGGCATGGTGGTGC	-2	True	NA	NA	False	ACTAAA	-29	NA	225999343	225968660	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_225968692_225982703_225985524_225987895_225988389_225991242_225991364_225992397_225992568_225992890_225993003_225995265_225995384_225999192
H1_mix_00007559	chr1	-	3019	16	NNC	ENSG00000183814.16	novel	2998	15	NA	NA	0	43503	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	32.843467133257	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTACAAAATAATTGTTAT	-7	True	NA	NA	False	AAAACA	-22	NA	226309164	226187645	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_226187669_226231158_226232607_226233095_226233194_226233343_226233524_226238970_226239097_226250838_226250920_226265532_226265635_226266212_226266333_226267956_226268091_226277774_226277933_226286332_226286459_226287663_226287798_226295841_226295947_226297718_226297814_226301172_226301206_226309108
H1_mix_00007563	chr1	-	1077	9	ISM	ENSG00000183814.16	ENST00000481685.1	1916	13	128	32663	38	22317	5prime_fragment	FALSE	canonical	3	24	junction_6	35.9302710120589	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACCAAAAAAGACTTAAAGAT	639	False	NA	NA	False	AATAAA	-11	NA	226309126	226265375	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_226265635_226266212_226266333_226267956_226268091_226277774_226277933_226286332_226286459_226287663_226287798_226297718_226297814_226301172_226301206_226309108
H1_mix_00007564	chr1	-	4626	22	FSM	ENSG00000143799.14	ENST00000677884.1	4620	22	0	-6	0	0	multi-exon	FALSE	canonical	3	2233	junction_17	266.67558658551	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTATTGCGTGTCTGG	-18	True	NA	-7	True	ATTAAA	-20	NA	226408096	226360690	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_226361542_226361968_226362084_226363098_226363161_226363942_226364071_226365001_226365155_226365953_226366053_226367479_226367609_226368198_226368322_226370433_226370518_226374225_226374355_226377107_226377304_226379141_226379275_226379572_226379642_226379921_226380165_226381067_226381209_226383035_226383184_226385503_226386443_226388655_226388756_226390409_226390625_226392198_226392315_226402213_226402380_226407809
H1_mix_00007566	chr1	-	4934	22	FSM	ENSG00000143799.14	ENST00000679276.1	4918	22	0	-16	0	0	multi-exon	FALSE	canonical	3	2223	junction_16	274.589126166017	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAATACTCGATTAAAAAT	NA	False	NA	-43	True	ATTAAA	-35	NA	226408154	226360726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_226361542_226361968_226362084_226363098_226363161_226363942_226365155_226365953_226366053_226367479_226367609_226368198_226368322_226370433_226370518_226374225_226374355_226377107_226377304_226379141_226379275_226379572_226379642_226379921_226380165_226381067_226381209_226383035_226383184_226385503_226385681_226386325_226386443_226388655_226388756_226390409_226390625_226392198_226392315_226402213_226402380_226407809
H1_mix_00007568	chr1	-	5342	13	FSM	ENSG00000143799.14	ENST00000677374.1	5697	13	355	0	355	0	multi-exon	FALSE	canonical	3	2315	junction_7	242.770296096262	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACTCCATCTCAAAAAGGA	4080	False	NA	NA	False	NA	NA	NA	226386442	226362217	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_226364071_226365001_226365155_226365953_226366053_226367479_226367609_226368198_226368322_226370433_226370518_226374225_226374355_226377107_226377304_226379141_226379275_226379572_226379642_226379921_226381209_226383035_226383184_226385503
H1_mix_00007571	chr1	-	1269	6	NNC	ENSG00000081692.13	novel	2484	6	NA	NA	31	845	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	47.5335670868493	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGGCCCACCCCTGTCG	1	True	NA	-19	True	AATAAA	-18	NA	227735271	227732302	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_227732677_227732880_227732956_227733413_227733682_227733906_227734033_227734650_227734817_227735011
H1_mix_00007573	chr1	-	3423	9	FSM	ENSG00000143793.13	ENST00000472617.5	3554	9	145	-14	145	7	multi-exon	FALSE	canonical	1	2	junction_3	151.88400179084	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGGTCAGTATCAGGGG	4017	False	NA	4	True	AATAAA	-29	NA	228105266	228100718	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_228101255_228101338_228101474_228101734_228101915_228102079_228102166_228102309_228102383_228102477_228102561_228102642_228102689_228102898_228103050_228103133
H1_mix_00007574	chr1	-	548	5	FSM	ENSG00000143793.13	ENST00000492757.5	548	5	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_3	16.0837651064668	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAGAAGAAGAAGAAAGA	6281	False	NA	33	True	AAAAAG	-19	NA	228103002	228101412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_228101474_228102079_228102166_228102309_228102561_228102642_228102689_228102898
H1_mix_00007575	chr1	-	854	3	FSM	ENSG00000143793.13	ENST00000491293.1	854	3	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_1	23	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTCCCCGGGGCGCTGCG	5894	False	NA	NA	False	GGGGCT	-34	NA	228103389	228102241	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_228102689_228102898_228103050_228103133
H1_mix_00007582	chr1	-	4639	5	NNC	ENSG00000154370.16	novel	2511	5	NA	NA	-173	62	intron_retention	FALSE	canonical	0	0	junction_3	40.7737660757502	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCCCAGGGAGGCTGTT	6	True	NA	60	True	NA	NA	NA	228407008	228393610	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_228397048_228397142_228397166_228400963_228401192_228402065_228402162_228406153
H1_mix_00007584	chr1	-	404	1	FSM	ENSG00000181201.4	ENST00000436555.2	382	1	-37	15	-37	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGCTCCAAGTGAGGTGC	-5	True	NA	NA	False	NA	NA	NA	228464631	228464227	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_228464200_228464600
H1_mix_00007586	chr1	-	4180	27	NNC	ENSG00000069248.12	novel	5208	26	NA	NA	0	18523	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	74.0713313649587	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCCTGTCTCAAGAAAAAA	5	True	NA	NA	False	NA	NA	NA	229508326	229421735	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_229421761_229441296_229442041_229444913_229445003_229449125_229449191_229450524_229450606_229452524_229452644_229458160_229458297_229460610_229460770_229463542_229463677_229464623_229464876_229465419_229465520_229466633_229466757_229470579_229470805_229475637_229475733_229477596_229477761_229484053_229484146_229486370_229486529_229487465_229487614_229489954_229490103_229495494_229495566_229495891_229496048_229498135_229498307_229499683_229499819_229500755_229500864_229501998_229502103_229506039_229506159_229508067
H1_mix_00007587	chr1	-	4181	27	NNC	ENSG00000069248.12	novel	5208	26	NA	NA	0	18523	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	74.0713313649587	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCCTGTCTCAAGAAAAAA	5	True	NA	NA	False	NA	NA	NA	229508326	229421735	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_229421762_229441296_229442041_229444913_229445003_229449125_229449191_229450524_229450606_229452524_229452644_229458160_229458297_229460610_229460770_229463542_229463677_229464623_229464876_229465419_229465520_229466633_229466757_229470579_229470805_229475637_229475733_229477596_229477761_229484053_229484146_229486370_229486529_229487465_229487614_229489954_229490103_229495494_229495566_229495891_229496048_229498135_229498307_229499683_229499819_229500755_229500864_229501998_229502103_229506039_229506159_229508067
H1_mix_00007588	chr1	-	1351	6	FSM	ENSG00000143632.15	ENST00000684723.1	2236	6	0	885	0	-5	multi-exon	FALSE	canonical	1	2	junction_5	144.445976060256	314	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGTGGTCGTGTTTATT	-6	True	NA	-6	True	ATTAAA	-19	NA	229434100	229431249	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_229431643_229431720_229431903_229431993_229432186_229432269_229432432_229432555_229432881_229434003
H1_mix_00007589	chr1	-	790	6	FSM	ENSG00000069248.12	ENST00000366678.4	779	6	0	-11	0	11	multi-exon	FALSE	canonical	2	8	junction_1	132.378245946983	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGAAGCGGAAGGATTGC	5	True	NA	NA	False	NA	NA	NA	229508326	229499155	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_229499221_229499683_229499819_229500755_229500864_229501998_229502103_229506039_229506159_229508067
H1_mix_00007591	chr1	-	3783	8	NNC	ENSG00000177614.11	novel	10914	7	NA	NA	0	-92	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	29.407759631271	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTAATTCAAGCATTTTG	1	True	NA	NA	False	NA	NA	NA	230426332	230314581	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_230314606_230321644_230323621_230325309_230325416_230332843_230333042_230337107_230337289_230350957_230351093_230356893_230357322_230425597
H1_mix_00007593	chr1	-	3208	23	NIC	ENSG00000143643.13	novel	3276	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_6	11.9254745041344	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTATGTGTTTATTTTG	321	False	NA	-2	True	AATAAA	-41	NA	230978796	230906242	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_230907020_230908711_230908792_230908941_230909021_230911469_230911550_230912622_230912759_230916192_230916300_230920509_230920595_230921420_230921505_230923840_230923934_230924840_230924974_230925516_230925648_230928936_230929094_230931297_230931473_230931735_230931878_230933778_230933862_230939385_230939497_230940439_230940557_230943805_230943899_230945388_230945455_230954332_230954404_230958223_230958300_230961208_230961304_230978559
H1_mix_00007594	chr1	-	558	5	FSM	ENSG00000143643.13	ENST00000522821.5	558	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	21.5232432500309	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAGGTGAGTAAAATAATAA	321	False	NA	NA	False	TATAAA	-17	NA	230978796	230933782	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_230933862_230954332_230954404_230958223_230958300_230961208_230961304_230978559
H1_mix_00007595	chr1	-	795	6	FSM	ENSG00000143633.13	ENST00000451322.1	795	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	73.428604780426	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGGAACAACTGAGTCAAC	69	False	NA	NA	False	AATAAA	-7	NA	231241090	231224254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_231224415_231225470_231225524_231226738_231226826_231226972_231227069_231238856_231239189_231241023
H1_mix_00007596	chr1	-	1090	4	FSM	ENSG00000135766.9	ENST00000658954.1	1090	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	40.3567425180312	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGATTGTTGCCAGTGAC	9076	False	NA	NA	False	ATTAAA	-24	NA	231421262	231365907	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_231366476_231370561_231370699_231373979_231374100_231420997
H1_mix_00007598	chr1	-	1262	2	FSM	ENSG00000233461.6	ENST00000666601.1	1428	2	0	166	0	-166	multi-exon	FALSE	canonical	3	70	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTAATTTTTTTTTTCTCT	-14	True	NA	NA	False	NA	NA	NA	231528596	231526330	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_231527416_231528419
H1_mix_00007601	chr1	-	8443	33	NIC	ENSG00000135749.19	novel	7530	34	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_12	23.9210125987593	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2	True	NA	NA	False	NA	NA	NA	233295725	232984135	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_232986541_232998250_232998439_232999104_232999380_233000304_233000536_233001536_233001682_233014664_233014778_233016920_233017155_233025145_233025400_233054267_233054484_233057231_233057291_233090060_233090191_233095754_233095864_233135012_233135191_233139713_233139856_233160282_233160434_233161270_233161364_233177801_233177899_233179065_233179176_233198938_233199031_233200153_233200265_233208517_233208690_233217898_233217932_233218030_233218185_233227225_233227372_233236844_233236981_233250738_233250833_233252353_233252500_233252640_233252789_233258027_233259345_233261284_233261322_233262044_233262166_233262957_233263164_233295325
H1_mix_00007606	chr1	-	675	1	FSM	ENSG00000231940.1	ENST00000443360.1	580	1	-32	-63	-32	63	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCATCTTTCCTGGGTCCT	6248	False	NA	NA	False	AATAAA	-40	NA	233289479	233288804	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_233288800_233289500
H1_mix_00007607	chr1	-	258	1	FSM	ENSG00000225486.1	ENST00000453379.1	353	1	73	22	73	-22	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGTTCTTGGAGAAGGCCC	NA	False	NA	NA	False	NA	NA	NA	233836359	233836101	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_233836100_233836400
H1_mix_00007608	chr1	-	297	1	FSM	ENSG00000235605.1	ENST00000422958.1	438	1	-18	159	-18	-159	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGCGTCCACAACGGCAA	2	False	NA	NA	False	NA	NA	NA	234357159	234356862	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_234356900_234357200
H1_mix_00007610	chr1	-	8573	28	NNC	ENSG00000059588.10	novel	5206	30	NA	NA	6822	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_8	42.1844210251733	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCTTTAATAAACACTTTT	6806	False	NA	-32	True	NA	NA	NA	234472357	234391409	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_234391746_234392415_234392553_234393361_234393487_234393645_234393838_234398381_234398554_234400852_234400949_234401180_234401263_234405902_234409574_234410444_234410532_234418083_234418234_234420701_234420813_234425672_234425794_234427316_234427389_234427575_234427767_234429135_234429325_234429415_234429678_234430086_234430302_234433409_234433572_234437274_234437373_234446802_234446976_234448479_234448577_234450427_234450567_234457666_234457757_234459229_234459327_234460260_234460397_234465655_234465709_234467501_234467651_234471187
H1_mix_00007611	chr1	-	5109	30	NNC	ENSG00000059588.10	novel	5206	30	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_20	30.2152405417996	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCTTTAATAAACACTTTT	-19	True	NA	-32	True	NA	NA	NA	234479182	234391409	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_234391746_234392415_234392553_234393361_234393487_234393645_234393838_234398381_234398554_234401180_234401263_234405902_234406100_234410444_234410532_234418083_234418234_234420701_234420813_234425672_234425794_234427316_234427389_234427575_234427767_234429135_234429325_234429415_234429678_234430086_234430302_234433409_234433572_234437274_234437373_234446802_234446976_234448479_234448577_234450427_234450567_234457666_234457757_234459229_234459327_234460260_234460397_234463836_234463935_234465655_234465709_234467501_234467651_234471187_234471258_234472713_234472812_234478172
H1_mix_00007614	chr1	-	477	2	FSM	ENSG00000188739.15	ENST00000475960.1	477	2	0	0	0	0	multi-exon	FALSE	canonical	3	753	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAGAAGAAGAAATTCACCA	558	False	NA	NA	False	AAAAAG	-26	NA	235160962	235155087	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_235155113_235160510
H1_mix_00007617	chr1	-	3199	3	ISM	ENSG00000054267.22	ENST00000474953.5	3463	17	17615	35246	-819	15	internal_fragment	FALSE	canonical	3	164	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTAGTAATTTTAGTTCA	5201	False	NA	-1	True	AATAAA	-40	NA	235176462	235166879	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_235168653_235172617_235172765_235175183
H1_mix_00007624	chr1	-	824	1	FSM	ENSG00000223776.5	ENST00000493812.2	1430	1	468	138	468	-138	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTCTGTGCCTATTAGA	NA	False	NA	NA	False	NA	NA	NA	236524032	236523208	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_236523200_236524000
H1_mix_00007626	chr1	-	6538	44	FSM	ENSG00000119285.11	ENST00000366581.6	6538	44	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_22	83.1905356662982	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGACTGCTGTGTTTGT	3	True	NA	-30	True	AGTAAA	-18	NA	236604504	236550670	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_236550991_236551998_236552108_236553580_236553740_236554597_236554753_236555295_236555465_236555550_236555656_236555804_236555940_236556099_236556259_236557194_236557346_236558236_236558530_236558994_236559136_236559713_236559838_236561224_236561272_236564497_236564662_236565918_236566046_236566645_236566877_236568995_236569125_236571350_236571473_236571567_236571687_236572410_236572555_236572724_236572829_236574201_236574334_236576218_236576378_236576779_236576950_236581221_236581415_236582735_236582873_236583012_236583197_236585024_236585217_236585819_236585942_236586240_236586453_236587401_236587491_236587947_236588044_236590846_236590955_236591992_236592111_236592522_236592634_236594011_236594115_236595539_236595674_236595832_236596045_236596835_236596977_236597877_236597980_236599482_236599625_236603159_236603377_236603953_236604128_236604421
H1_mix_00007629	chr1	-	1492	2	FSM	ENSG00000215808.4	ENST00000400946.3	1579	2	47	40	17	-8	multi-exon	FALSE	canonical	2	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTAAAATAAAAATGCATT	-10	True	NA	NA	False	AATAAA	-10	NA	238486006	238480411	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_238481682_238485784
H1_mix_00007630	chr1	-	1823	1	FSM	ENSG00000228818.1	ENST00000451892.1	2720	1	922	-25	922	25	mono-exon	FALSE	NA	NA	NA	NA	NA	652	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGCTGATGTATCAGTGG	NA	False	NA	NA	False	GGGGCT	-7	NA	240144467	240142644	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_240142600_240144500
H1_mix_00007631	chr1	-	2451	10	FSM	ENSG00000091483.8	ENST00000493477.2	2353	10	-98	0	-7	0	multi-exon	FALSE	canonical	3	8	junction_9	174.056681558226	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTTTAATTTTGGAGGTT	NA	False	NA	76	True	NA	NA	NA	241519792	241497510	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_241497971_241500436_241500591_241502442_241502571_241504041_241504246_241506002_241506169_241508602_241508786_241511966_241512144_241513602_241513714_241517181_241517317_241519059
H1_mix_00007632	chr1	-	2795	5	NIC	ENSG00000054277.14	novel	2628	4	NA	NA	0	-78	combination_of_known_splicesites	FALSE	canonical	2	8	junction_3	78.1888738888085	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTCTCCCCTTGTTTCCT	818	False	NA	NA	False	AATAAA	-26	NA	241640340	241593201	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_241594692_241597745_241597998_241600379_241600654_241604259_241604580_241639881
H1_mix_00007633	chr1	-	1961	4	FSM	ENSG00000054277.14	ENST00000469376.5	1961	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	83.1504660239496	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCTTTTGTTATAGGGG	818	False	NA	0	True	AATAAA	-26	NA	241640340	241593601	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_241594692_241597745_241597998_241604419_241604580_241639881
H1_mix_00007634	chr1	-	1293	6	FSM	ENSG00000180287.17	ENST00000467561.5	1353	6	10	50	10	-50	multi-exon	FALSE	canonical	1	1	junction_2	7.54718490564528	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTTGTTTTCCCTTTCT	33	False	NA	NA	False	AATGAA	-25	NA	242524661	242124467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_242124666_242219987_242220116_242265361_242265449_242288361_242288531_242348105_242348243_242524087
H1_mix_00007637	chr1	-	7011	20	NIC	ENSG00000143702.16	novel	7059	20	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_16	68.9761289954078	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATGATTGTATATTTTA	7	True	NA	-9	True	AATAAA	-18	NA	243255348	243124427	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_243126739_243128248_243128301_243129359_243129454_243136142_243136232_243139936_243140108_243142315_243142464_243156220_243156348_243164283_243166117_243169627_243169755_243172696_243172847_243185778_243186073_243186258_243186423_243191017_243191495_243199059_243199195_243200517_243200681_243200776_243200836_243211885_243211965_243221723_243221814_243225175_243225322_243255046
H1_mix_00007640	chr1	-	3235	8	FSM	ENSG00000117020.19	ENST00000492957.2	3225	8	0	-10	0	10	multi-exon	FALSE	canonical	1	1	junction_1	5.86584719075652	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCTTTTTTAAACGGTAT	10	True	NA	NA	False	ATTAAA	-4	NA	243843170	243610495	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_243613035_243613670_243613740_243615095_243615162_243637610_243637743_243645892_243646038_243664771_243664884_243695590_243695717_243843124
H1_mix_00007641	chr1	-	1132	5	FSM	ENSG00000035687.10	ENST00000462358.1	932	5	-200	0	-200	0	multi-exon	FALSE	canonical	3	733	junction_3	26.2392835268039	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAAATTGTACTGTTGGA	NA	False	NA	NA	False	NA	NA	NA	244425114	244418893	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_244418915_244420169_244420297_244422834_244422917_244423952_244424061_244424320
H1_mix_00007643	chr1	-	12852	2	FSM	ENSG00000153187.20	ENST00000366527.4	12852	2	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCTATTCCATTTTTTC	9821	False	NA	-6	True	AATAAA	-23	NA	244854748	244840637	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_244845345_244846603
H1_mix_00007644	chr1	-	5290	6	FSM	ENSG00000153187.20	ENST00000475997.6	5290	6	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_3	2222.07422018258	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCTATTCCATTTTTTC	8512	False	NA	-6	True	AATAAA	-23	NA	244856057	244840637	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_244845345_244846603_244846707_244848787_244848857_244854972_244855045_244855423_244855609_244855903
H1_mix_00007645	chr1	-	8597	17	NIC	ENSG00000153187.20	novel	13084	16	NA	NA	0	-33	intron_retention	FALSE	canonical	2	27	junction_3	1925.42442459935	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTCTTTCAGGATCG	4	True	NA	NA	False	NA	NA	NA	244864538	244843156	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_244843182_244845246_244845345_244846603_244846707_244848787_244854504_244854972_244855045_244855423_244855609_244855903_244856159_244856456_244856626_244856727_244856857_244857597_244857718_244858010_244858275_244858728_244858842_244859274_244859375_244860334_244860475_244862460_244862535_244862618_244862731_244863616
H1_mix_00007647	chr1	-	433	1	FSM	ENSG00000232793.2	ENST00000452887.2	259	1	7	-181	7	181	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATAGGGCTTAGGGGATTG	NA	False	NA	NA	False	NA	NA	NA	245283082	245282649	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_245282600_245283100
H1_mix_00007648	chr1	-	1477	12	FSM	ENSG00000185420.19	ENST00000630181.2	1458	12	0	-19	0	19	multi-exon	FALSE	canonical	0	0	junction_2	79.8502731097551	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTACTCATTGGCGATTTT	10	True	NA	6	True	AAAACA	-37	NA	246417409	245749322	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_245749665_245764040_245764150_245858495_245858671_245863798_245863887_245915529_245915641_245927930_245928034_245929869_245929938_246327200_246327338_246330479_246330538_246335366_246335475_246355030_246355095_246417295
H1_mix_00007649	chr1	-	1495	11	NIC	ENSG00000185420.19	novel	1565	12	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	66.1453702083524	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATGCCATCTGGTAATTG	-5	True	NA	-22	True	AATAAA	-18	NA	246507322	245749350	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_245749665_245858495_245858671_245863798_245863887_245915529_245915641_245927930_245928034_245929869_245929938_246327200_246327338_246330479_246330538_246335366_246335475_246355030_246355095_246507053
H1_mix_00007651	chr1	-	1810	9	NNC	ENSG00000162851.8	novel	1784	8	NA	NA	0	82122	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	50.4554258727443	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGACTTTTCTACTTGAA	-5	True	NA	NA	False	NA	NA	NA	246566261	246458438	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_246458465_246540560_246541203_246544520_246544682_246548544_246548608_246551212_246551303_246556572_246556722_246557380_246557535_246564345_246564435_246565825
H1_mix_00007662	chr1	-	2548	10	NNC	ENSG00000162714.13	novel	5315	10	NA	NA	6	-2119	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	83.11898358437	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTCTGTTTCTGCTGTGC	17	True	NA	-1	True	AATGAA	-16	NA	247331839	247300319	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_247301443_247308474_247308589_247309698_247309807_247310323_247310457_247323153_247323231_247328682_247328867_247329188_247329616_247329965_247330082_247331431_247331648_247331789
H1_mix_00007666	chr1	-	2292	9	NIC	ENSG00000171163.16	novel	2704	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	26	junction_6	40.6061494727092	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCATGTGTGGGCAGAGCA	796	False	NA	-7	True	AATAAA	-14	NA	248858324	248850008	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_248850517_248850681_248850782_248853936_248854052_248855379_248855459_248855557_248855636_248855724_248855947_248856372_248856423_248856513_248856563_248857233
H1_mix_00007668	chr1	-	2219	11	NIC	ENSG00000171163.16	novel	1942	12	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_6	44.0341912608827	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTCCTAAAGGACAAAATAAA	54	False	NA	-40	True	NA	NA	NA	248859066	248850041	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_248850517_248850681_248850782_248853936_248854052_248855379_248855459_248855557_248855636_248855724_248855947_248856287_248856423_248856513_248856563_248857233_248857860_248858130_248858322_248858917
H1_mix_00007669	chr1	-	1919	12	FSM	ENSG00000171163.16	ENST00000412341.6	1916	12	0	-3	0	0	multi-exon	FALSE	canonical	2	4	junction_2	58.0451519889602	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTCCTAAAGGACAAAATAAA	52	False	NA	-40	True	NA	NA	NA	248859068	248850041	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_248850517_248850681_248850782_248850862_248850948_248853936_248854052_248855379_248855459_248855557_248855947_248856372_248856423_248856513_248856563_248857233_248857437_248857827_248857860_248858130_248858322_248858917
H1_mix_00007672	chr1	+	203	1	Intergenic	novelGene_2	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGGCAGAGCTAGGTCCCA	NA	False	NA	NA	False	NA	NA	NA	5046332	5046535	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_5046300_5046500
H1_mix_00007673	chr1	+	249	1	Intergenic	novelGene_5	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACTAGCCCGCCTCTCA	NA	False	NA	NA	False	NA	NA	NA	5116922	5117171	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_5116900_5117200
H1_mix_00007674	chr1	+	1990	1	Intergenic	novelGene_7	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTGCTTTTCTTCAGA	NA	False	NA	NA	False	NA	NA	NA	14808313	14810303	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_14808300_14810300
H1_mix_00007675	chr1	+	398	1	Intergenic	novelGene_13	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	476	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGGGTCCTCCCAGGGCTG	3469	False	NA	NA	False	NA	NA	NA	21431462	21431860	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_21431500_21431900
H1_mix_00007676	chr1	+	402	1	Intergenic	novelGene_39	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGGGTTCATTGAGCTT	NA	False	NA	NA	False	NA	NA	NA	52301291	52301693	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_52301300_52301700
H1_mix_00007677	chr1	+	1383	1	Intergenic	novelGene_41	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTGGATCTCAAACATG	NA	False	NA	NA	False	NA	NA	NA	55024450	55025833	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_55024400_55025800
H1_mix_00007679	chr1	+	209	1	Intergenic	novelGene_44	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCAGATAAAAGAAGGCAAG	5498	False	NA	NA	False	TTTAAA	-18	NA	58629918	58630127	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_58629900_58630100
H1_mix_00007680	chr1	+	546	1	Intergenic	novelGene_52	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGAGGAGGTTTTGGAGG	NA	False	NA	NA	False	NA	NA	NA	65644800	65645346	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_65644800_65645300
H1_mix_00007682	chr1	+	253	1	Intergenic	novelGene_61	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTTAATCTTTTTAAAGC	NA	False	NA	NA	False	TTTAAA	-31	NA	72990265	72990518	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_72990300_72990500
H1_mix_00007684	chr1	+	225	1	Intergenic	novelGene_62	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAGGAGTCATGGCACCAAA	NA	False	NA	NA	False	NA	NA	NA	72992908	72993133	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_72992900_72993100
H1_mix_00007686	chr1	+	317	1	Intergenic	novelGene_76	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAGAGAAATAAATAATCCT	NA	False	NA	NA	False	TTTAAA	-1	NA	91264362	91264679	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_91264400_91264700
H1_mix_00007687	chr1	+	272	1	Intergenic	novelGene_78	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCTCAAATCCACACTTT	NA	False	NA	NA	False	NA	NA	NA	92073721	92073993	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_92073700_92074000
H1_mix_00007689	chr1	+	231	1	Intergenic	novelGene_79	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	346	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCTGGACTACAGCTAT	NA	False	NA	NA	False	ACTAAA	-18	NA	99512189	99512420	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_99512200_99512400
H1_mix_00007690	chr1	+	604	1	Intergenic	novelGene_90	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGGAAAGGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	114489500	114490104	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_114489500_114490100
H1_mix_00007691	chr1	+	425	1	Intergenic	novelGene_93	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGCAAATTCATACTAAAA	NA	False	NA	NA	False	TATAAA	-22	NA	117776801	117777226	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_117776800_117777200
H1_mix_00007693	chr1	+	395	1	Intergenic	novelGene_101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACTGTTCTCCTAAGAC	NA	False	NA	NA	False	NA	NA	NA	145088035	145088430	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_145088000_145088400
H1_mix_00007695	chr1	+	507	1	Intergenic	novelGene_107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAAATGGAGAAAGGA	NA	False	NA	NA	False	NA	NA	NA	148879194	148879701	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_148879200_148879700
H1_mix_00007696	chr1	+	420	1	Intergenic	novelGene_108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATCATTTCTGCACATGT	2110	False	NA	NA	False	NA	NA	NA	149360794	149361214	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_149360800_149361200
H1_mix_00007698	chr1	+	342	1	Intergenic	novelGene_109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCCCAGATAAATTAGC	119	False	NA	NA	False	NA	NA	NA	150613964	150614306	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_150614000_150614300
H1_mix_00007699	chr1	+	377	1	Intergenic	novelGene_111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGGTGCGGTGGCTCAT	2144	False	NA	NA	False	NA	NA	NA	150617986	150618363	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_150618000_150618400
H1_mix_00007700	chr1	+	267	1	Intergenic	novelGene_114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTCTTATTTCTATT	NA	False	NA	NA	False	NA	NA	NA	155630919	155631186	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_155630900_155631200
H1_mix_00007702	chr1	+	564	1	Intergenic	novelGene_124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTACAGCCCTAGACCC	9922	False	NA	NA	False	TATAAA	-43	NA	183615055	183615619	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_183615100_183615600
H1_mix_00007703	chr1	+	744	1	Intergenic	novelGene_125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCAGGCTGTACTGCCGC	NA	False	NA	NA	False	NA	NA	NA	183616250	183616994	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_183616200_183617000
H1_mix_00007704	chr1	+	1442	1	Intergenic	novelGene_129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTGTGTGCATTTTATT	1289	False	NA	8	True	AATAGA	-23	NA	193266527	193267969	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_193266500_193268000
H1_mix_00007705	chr1	+	279	1	Intergenic	novelGene_133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGTCTAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	204033973	204034252	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_204034000_204034300
H1_mix_00007706	chr1	+	274	1	Intergenic	novelGene_135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGTCTCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	204508216	204508490	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_204508200_204508500
H1_mix_00007707	chr1	+	718	1	Intergenic	novelGene_136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAGGTGCCAATGGAGCA	NA	False	NA	NA	False	NA	NA	NA	204670952	204671670	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_204671000_204671700
H1_mix_00007708	chr1	+	260	1	Intergenic	novelGene_141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGTCACATAAGCATAC	343	False	NA	NA	False	AATAAA	-23	NA	212590171	212590431	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_212590200_212590400
H1_mix_00007709	chr1	+	467	1	Intergenic	novelGene_145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCAGGCCTTCCTCCAGA	789	False	NA	NA	False	NA	NA	NA	212911267	212911734	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_212911300_212911700
H1_mix_00007711	chr1	+	465	1	Intergenic	novelGene_147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATCTTCAAGAAAAGTAGAA	2438	False	NA	NA	False	NA	NA	NA	212912916	212913381	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_212912900_212913400
H1_mix_00007712	chr1	+	202	1	Intergenic	novelGene_151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAAGAATTCTGACTG	NA	False	NA	NA	False	NA	NA	NA	215411908	215412110	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_215411900_215412100
H1_mix_00007713	chr1	+	1937	1	Intergenic	novelGene_153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGTGAAGGAAGCAAGCCT	NA	False	NA	NA	False	NA	NA	NA	215412483	215414420	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_215412500_215414400
H1_mix_00007714	chr1	+	703	1	Intergenic	novelGene_157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATCCCGAAATGGC	NA	False	NA	NA	False	NA	NA	NA	216786913	216787616	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_216786900_216787600
H1_mix_00007715	chr1	+	2838	1	Intergenic	novelGene_158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	724	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTATGTTCTCAAGAAG	NA	False	NA	NA	False	NA	NA	NA	220583817	220586655	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_220583800_220586700
H1_mix_00007716	chr1	+	247	1	Intergenic	novelGene_172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCATTAGTCTGTTCTACC	NA	False	NA	NA	False	TTTAAA	-2	NA	231830611	231830858	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_231830600_231830900
H1_mix_00007718	chr1	+	556	1	Intergenic	novelGene_176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTCGTAATTGCCTTTA	NA	False	NA	8	True	TATAAA	-19	NA	232137290	232137846	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_232137300_232137800
H1_mix_00007719	chr1	+	725	1	Intergenic	novelGene_178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGCTGAAGGAGCCGGGA	4205	False	NA	NA	False	NA	NA	NA	232230840	232231565	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_232230800_232231600
H1_mix_00007721	chr1	+	1735	1	Intergenic	novelGene_183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	646	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-36	NA	243651036	243652771	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_243651000_243652800
H1_mix_00007722	chr1	+	1817	1	FSM	ENSG00000225630.1	ENST00000457540.1	1044	1	0	-773	0	773	mono-exon	FALSE	NA	NA	NA	NA	NA	1260	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCCTCCCTTGGCAGGGA	-4	True	NA	NA	False	NA	NA	NA	629639	631456	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_629600_631500
H1_mix_00007724	chr1	+	2166	1	FSM	ENSG00000229344.1	ENST00000427426.1	682	1	0	-1484	0	1484	mono-exon	FALSE	NA	NA	NA	NA	NA	12730	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGTTAAAATATTAGATATT	-8	True	NA	NA	False	NA	NA	NA	632756	634922	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_632800_634900
H1_mix_00007726	chr1	+	314	2	FSM	ENSG00000272438.1	ENST00000607769.1	351	2	33	4	33	-4	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCCGATTCCTCCTGCATC	3	True	NA	NA	False	NA	NA	NA	904866	915972	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_904958_915749
H1_mix_00007727	chr1	+	2609	9	NIC	ENSG00000187961.15	novel	2567	12	NA	NA	0	0	intron_retention	TRUE	canonical	0	0	junction_1	49.9948434841034	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCGCAGTGGGGCTGCGGG	-18	True	NA	NA	False	NA	NA	NA	960583	964530	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_961553_961628_961751_961825_962472_962703_962918_963108_963254_963336_963505_963919_964009_964106_964181_964348
H1_mix_00007728	chr1	+	3993	7	NIC	ENSG00000187961.15	novel	2567	12	NA	NA	6	-5	intron_retention	FALSE	canonical	3	67	junction_3	39.1109532825098	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGGCTGAGCATCTCTC	-12	True	NA	4	True	AATAAA	-16	NA	960589	965714	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_961751_961825_962472_962703_962918_963031_964009_964106_964168_964348_964531_964962
H1_mix_00007729	chr1	+	800	3	FSM	ENSG00000217801.11	ENST00000692821.1	722	3	10	-88	2	-2	multi-exon	FALSE	canonical	1	1	junction_2	2	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTTTGTGCCTTCAGTC	6	True	NA	4	True	NA	NA	NA	1059709	1066439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_1059783_1060276_1060394_1065829
H1_mix_00007730	chr1	+	1187	7	NIC	ENSG00000169972.12	novel	1257	8	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	129.731346336274	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCAGTTTGTTTCTTCAGC	-11	True	NA	9	True	AATAAA	-17	NA	1308608	1311677	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_1308721_1309085_1309274_1309453_1309604_1309680_1309852_1310633_1310689_1310908_1311072_1311329
H1_mix_00007731	chr1	+	263	3	ISM	ENSG00000215915.10	ENST00000378785.7	3864	12	2399	15661	2174	-1400	internal_fragment	FALSE	canonical	2	3	junction_1	38.5	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGGCGCAGGCCTGGCCCT	2283	False	NA	NA	False	NA	NA	NA	1452087	1454502	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_1452123_1452364_1452435_1454344
H1_mix_00007732	chr1	+	3044	17	NNC	ENSG00000160072.20	novel	4098	16	NA	NA	-494	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	179.162711923408	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCCGTGTCTCTCTATTGA	1576	False	NA	19	True	AATAAA	-18	NA	1471270	1496202	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_1472090_1477273_1477351_1477750_1477849_1478643_1478746_1479048_1479109_1480866_1480937_1482137_1482304_1482544_1482615_1485015_1485172_1485781_1485839_1486109_1486236_1486543_1486669_1487862_1487915_1489203_1489275_1490256_1490425_1490562_1490672_1495484
H1_mix_00007733	chr1	+	2284	16	FSM	ENSG00000197785.14	ENST00000536055.6	2330	16	46	0	46	0	multi-exon	FALSE	canonical	2	2	junction_1	161.937436478825	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCCTGTCTGTCTCTTGG	34	False	NA	30	True	AATAAA	-18	NA	1512575	1534685	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_1512691_1516011_1516089_1517310_1517413_1517715_1517776_1518920_1518991_1520140_1520307_1520547_1520618_1522743_1522900_1523510_1523568_1523838_1523965_1524272_1524398_1525239_1525292_1526460_1526532_1527694_1527863_1529222_1529332_1533925
H1_mix_00007734	chr1	+	3344	19	FSM	ENSG00000197530.13	ENST00000511502.5	3326	19	-18	0	0	0	multi-exon	TRUE	canonical	3	25	junction_1	136.288421924305	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTTGCCTCTGCTGTCTGC	-17	True	NA	14	True	TATAAA	-16	NA	1615495	1630604	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_1615634_1616507_1616615_1623388_1623700_1623773_1623946_1624794_1624902_1624990_1625186_1625285_1625429_1625545_1625654_1626649_1626755_1626836_1627000_1627073_1627208_1627295_1627445_1627672_1627830_1628018_1628400_1628488_1628723_1629132_1629312_1629384_1629567_1629638_1629705_1630291
H1_mix_00007735	chr1	+	3081	20	NIC	ENSG00000197530.13	novel	3252	21	NA	NA	1	0	intron_retention	FALSE	canonical	3	35	junction_3	131.489569644165	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTTGCCTCTGCTGTCTG	24	True	NA	13	True	TATAAA	-15	NA	1615914	1630603	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_1616101_1616507_1616615_1623388_1623483_1623773_1623946_1624794_1624902_1624990_1625186_1625285_1625429_1625545_1625654_1626649_1626755_1626836_1627000_1627073_1627208_1627295_1627445_1627672_1627830_1628018_1628180_1628272_1628400_1628488_1628723_1629132_1629312_1629384_1629567_1629638_1629705_1630291
H1_mix_00007736	chr1	+	750	4	FSM	ENSG00000189409.14	ENST00000435358.5	750	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	21.5458168149231	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCGCCAGCAGCGCGTGCT	894	False	NA	NA	False	NA	NA	NA	1633202	1634568	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_1633356_1633747_1634100_1634201_1634329_1634450
H1_mix_00007737	chr1	+	4032	4	FSM	ENSG00000287356.1	ENST00000659232.1	4032	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2.16024689946929	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGAGGCAGCGTTTCCT	5091	False	NA	NA	False	GGGGCT	-28	NA	2315039	2321323	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_2315999_2316391_2317012_2317610_2317730_2318989
H1_mix_00007738	chr1	+	2663	6	FSM	ENSG00000157870.17	ENST00000378425.9	2665	6	2	0	2	0	multi-exon	FALSE	canonical	1	7	junction_4	164.665236161128	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTTGTGCTTTCTTCTT	230	False	NA	18	True	AATAAA	-18	NA	2586751	2591467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_2586949_2587090_2587296_2587740_2587793_2588389_2588454_2588953_2589041_2589409
H1_mix_00007739	chr1	+	2577	6	FSM	ENSG00000157870.17	ENST00000484099.5	2577	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	170.509119990691	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTGCTTTCTTCTTTT	-5	True	NA	20	True	AATAAA	-20	NA	2587077	2591469	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_2587296_2587740_2587793_2588389_2588454_2588529_2588626_2588953_2589041_2589409
H1_mix_00007740	chr1	+	2506	2	FSM	ENSG00000157870.17	ENST00000476686.1	2506	2	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTGTGCTTTCTTCTTT	1511	False	NA	19	True	AATAAA	-19	NA	2588593	2591468	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_2589041_2589409
H1_mix_00007741	chr1	+	559	5	FSM	ENSG00000130762.15	ENST00000418137.1	576	5	17	0	17	0	multi-exon	FALSE	canonical	3	9	junction_1	81.5659242576212	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTACACGCTGCACACAC	17	False	NA	NA	False	NA	NA	NA	3471640	3476019	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_3471792_3473077_3473231_3473392_3473523_3474707_3474783_3475969
H1_mix_00007742	chr1	+	531	1	FSM	ENSG00000272153.1	ENST00000607459.1	531	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGGCTGTGATGCCTGT	NA	False	NA	NA	False	AATAAA	-22	NA	3785007	3785538	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_3785000_3785500
H1_mix_00007743	chr1	+	1750	8	NIC	ENSG00000169598.17	novel	3152	8	NA	NA	54	13	combination_of_known_junctions	FALSE	canonical	2	8	junction_7	12.7150882571752	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCACTCATTGAGGATGC	58	False	NA	NA	False	AATAAA	-31	NA	3857334	3885442	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_3857718_3858717_3858845_3865811_3866001_3867973_3868054_3869604_3869776_3872471_3872573_3883506_3883801_3885037
H1_mix_00007747	chr1	+	612	4	FSM	ENSG00000158286.13	ENST00000492476.1	612	4	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_1	1.24721912892465	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTTCCCCTTAGCGCT	2110	False	NA	NA	False	NA	NA	NA	6211034	6212836	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_6211119_6211866_6212054_6212230_6212417_6212681
H1_mix_00007748	chr1	+	2072	5	NNC	ENSG00000225077.3	novel	1138	5	NA	NA	-89	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	10.7092249953019	109	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTCTGCCTGGGATGCCT	NA	False	NA	8	True	AATATA	-17	NA	6236150	6239444	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_6236337_6236968_6237151_6237244_6237346_6237469_6237849_6238220
H1_mix_00007749	chr1	+	949	1	FSM	ENSG00000271746.1	ENST00000607670.1	837	1	-147	35	-147	-35	mono-exon	FALSE	NA	NA	NA	NA	NA	454	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACATCTTTAAATTAAAAC	NA	False	NA	NA	False	NA	NA	NA	6393407	6394356	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_6393400_6394400
H1_mix_00007751	chr1	+	1350	6	FSM	ENSG00000041988.16	ENST00000054650.9	1361	6	14	-3	14	3	multi-exon	FALSE	canonical	0	0	junction_1	39.6706440582958	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCGCTCCCATCATCATTT	14	False	NA	17	True	AATAAA	-17	NA	6624881	6633565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_6624955_6625149_6625293_6628498_6628692_6630287_6630354_6632390_6632496_6632795
H1_mix_00007752	chr1	+	5439	12	NNC	ENSG00000171735.19	novel	3247	11	NA	NA	-31660	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	6.90550145993925	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACGTGTGTGTTTTGCTTT	-4	True	NA	19	True	ATTAAA	-22	NA	7704747	7769706	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_7704895_7732447_7732600_7736343_7736541_7736930_7737010_7737254_7737571_7737958_7738483_7744834_7745023_7745844_7746092_7747709_7747782_7751198_7751393_7752458_7752534_7766458
H1_mix_00007754	chr1	+	6312	22	NIC	ENSG00000049246.15	novel	6365	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	24	junction_18	10.9347684473761	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATTGTCCTGCCCTGTGT	18	True	NA	14	True	AATAAA	-22	NA	7784319	7845177	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_7784377_7784653_7785006_7785440_7785587_7786720_7786837_7788044_7788247_7793956_7794009_7798524_7798674_7801112_7801192_7803046_7803154_7803691_7803849_7808892_7808999_7809892_7810022_7810437_7810568_7819284_7819421_7820114_7820240_7820466_7820641_7826479_7826711_7827117_7827816_7829836_7830162_7835761_7835946_7836998_7837150_7842671
H1_mix_00007757	chr1	+	435	2	FSM	ENSG00000230679.1	ENST00000442636.1	456	2	0	21	0	-21	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTTGTAAAGAGGTGTT	171	False	NA	NA	False	ACTAAA	-18	NA	8878834	8879873	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_8878961_8879564
H1_mix_00007758	chr1	+	482	1	FSM	ENSG00000238249.2	ENST00000425872.1	743	1	465	-204	465	204	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGTTGTTAAACAACAT	3347	False	NA	NA	False	NA	NA	NA	8893873	8894355	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_8893900_8894400
H1_mix_00007759	chr1	+	1004	3	FSM	ENSG00000234546.5	ENST00000412639.4	1034	3	21	9	7	0	multi-exon	FALSE	canonical	3	6	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGTCATTGGTGGAATG	-14	True	NA	7	True	AATAAA	-20	NA	9182184	9192089	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_9182317_9183632_9183808_9191392
H1_mix_00007760	chr1	+	2887	5	FSM	ENSG00000173614.14	ENST00000377205.6	3734	5	0	847	0	-847	multi-exon	FALSE	canonical	3	4	junction_4	5.7662812973354	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGTTTTGTTTGGCCTGT	14	True	NA	NA	False	NA	NA	NA	9943474	9984651	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_9943516_9972017_9972189_9975591_9975776_9981030_9981171_9982300
H1_mix_00007761	chr1	+	319	1	FSM	ENSG00000202415.1	ENST00000365545.1	319	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTAGCTGCTTAGGCCAA	3857	False	NA	NA	False	ATTAAA	-13	NA	9947317	9947636	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_9947300_9947600
H1_mix_00007762	chr1	+	5973	28	FSM	ENSG00000130939.20	ENST00000343090.11	5905	28	-68	0	58	0	multi-exon	FALSE	canonical	2	4	junction_6	93.256420396294	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTTTGAGTCTCTTCTC	NA	False	NA	NA	False	AATAAA	-24	NA	10032889	10181239	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_10033695_10072027_10072215_10095460_10095597_10101107_10101196_10102947_10103093_10105515_10105745_10106196_10106584_10117458_10117601_10119512_10119614_10121961_10122077_10126793_10126878_10129391_10129449_10130499_10130617_10130714_10130814_10132368_10132483_10134987_10135187_10137066_10137206_10144939_10145040_10146962_10147091_10149183_10149283_10151325_10151562_10158355_10158483_10161141_10161287_10168135_10168271_10171137_10171330_10178643_10178819_10179415_10179563_10179894
H1_mix_00007763	chr1	+	10852	47	NIC	ENSG00000054523.19	novel	10855	49	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_24	62.2884813985205	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTCTCGATGTGCATTTAT	-3	True	NA	29	True	AATAAA	-22	NA	10210512	10381603	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_10210879_10232249_10232435_10256246_10256324_10258492_10258673_10261904_10261971_10267379_10267559_10268151_10268264_10271501_10271580_10272240_10272307_10275427_10275504_10276320_10276400_10277985_10278129_10282321_10282534_10291081_10291162_10292046_10292123_10295085_10295166_10295659_10295767_10296581_10296666_10296896_10297078_10297173_10297247_10320042_10320137_10321708_10321858_10323883_10324063_10324757_10324896_10326110_10326360_10334519_10334639_10336656_10336743_10337073_10337204_10337370_10337534_10339768_10339860_10342049_10342169_10343231_10343288_10345844_10345954_10347760_10347828_10348648_10348734_10352630_10352737_10360928_10361044_10361691_10361826_10363282_10363345_10365099_10365246_10365408_10365649_10368466_10368539_10371140_10371263_10374315_10374466_10374853_10375047_10375254_10375374_10376544
H1_mix_00007764	chr1	+	255	2	FSM	ENSG00000142657.21	ENST00000487775.1	462	2	0	207	0	-207	multi-exon	FALSE	canonical	3	1431	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTAATGTGCTCTGTTGC	NA	False	NA	NA	False	NA	NA	NA	10399043	10399801	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_10399126_10399628
H1_mix_00007767	chr1	+	1946	7	FSM	ENSG00000120948.19	ENST00000473869.5	1946	7	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_5	639.304309386383	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGATCTTGAGTTGTTT	1032	False	NA	NA	False	NA	NA	NA	11013715	11025019	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_11013966_11016843_11017008_11018732_11018874_11020428_11020600_11022123_11022251_11023192_11023330_11024063
H1_mix_00007769	chr1	+	2516	7	NIC	ENSG00000132879.14	novel	1734	5	NA	NA	-29	0	intron_retention	FALSE	canonical	3	12	junction_5	87.442203133778	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCAGTCTCGGGTATTT	414	False	NA	NA	False	ATTAAA	-19	NA	11654827	11663324	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_11654953_11655805_11656101_11658266_11658365_11658735_11658872_11661129_11662732_11662851_11662929_11663141
H1_mix_00007772	chr1	+	430	5	NNC	ENSG00000011021.23	novel	814	6	NA	NA	1	-2658	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	65.8786763680024	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAATCTCAGGGTATTT	25	False	NA	NA	False	AATAAA	-15	NA	11806260	11818121	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_11806350_11807130_11807191_11815845_11815912_11816614_11816681_11817972
H1_mix_00007773	chr1	+	6893	10	NNC	ENSG00000011021.23	novel	5631	22	NA	NA	1007	-1	intron_retention	FALSE	canonical	2	10	junction_6	30.739045022396	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTCTCCTTTAGCCTT	NA	False	NA	5	True	AATAAA	-14	NA	11830855	11843129	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_11833639_11833876_11834031_11834235_11834396_11834483_11834591_11835966_11836154_11836998_11837157_11837376_11837500_11838334_11838443_11838534_11838661_11840142
H1_mix_00007774	chr1	+	1294	1	FSM	ENSG00000285646.2	ENST00000666735.1	1180	1	27	-141	26	141	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTGTCTCAAAAAAAAAAAA	28	False	NA	NA	False	NA	NA	NA	11908177	11909471	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_11908200_11909500
H1_mix_00007776	chr1	+	779	6	FSM	ENSG00000116691.11	ENST00000478749.5	779	6	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	199.211043870565	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGGCCCTGGGACCCTGG	-34	True	NA	NA	False	NA	NA	NA	12019465	12029855	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_12019553_12022094_12022443_12022832_12022918_12029032_12029142_12029222_12029282_12029764
H1_mix_00007777	chr1	+	3523	15	NNC	ENSG00000120949.15	novel	2363	5	NA	NA	233	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	16.7607717420098	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTGAGGACATGATCAT	95	False	NA	25	True	CATAAA	-17	NA	12063702	12144205	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_12063827_12084463_12084552_12097100_12097218_12104378_12104532_12109565_12109657_12110040_12110205_12111897_12112015_12115576_12115730_12123283_12123378_12123714_12123828_12125950_12126053_12126182_12126237_12135587_12135614_12138228_12138437_12142286
H1_mix_00007779	chr1	+	16283	69	NIC	ENSG00000048707.15	novel	16245	69	NA	NA	-3	1	combination_of_known_splicesites	TRUE	canonical	2	5	junction_39	34.7697661043053	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTCTTTTGTTTTCTTCT	-7	True	NA	20	True	AATAAA	-23	NA	12230026	12512048	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_12230121_12234190_12234364_12242512_12242591_12244245_12244437_12244536_12244618_12249222_12249340_12253721_12253827_12256332_12256504_12256986_12257088_12257934_12258104_12260692_12260795_12260947_12261150_12261900_12262081_12266880_12267012_12267844_12267921_12268705_12268877_12270993_12271125_12273002_12273136_12275824_12278039_12279498_12279651_12282704_12283737_12288222_12288314_12290997_12291125_12293523_12293705_12299201_12299385_12304505_12304729_12308430_12308642_12311453_12311626_12311812_12311926_12314114_12314328_12318071_12318338_12319496_12319631_12321808_12321965_12322535_12322747_12323705_12323781_12327647_12327855_12329828_12329919_12333225_12333367_12335704_12335828_12341782_12341886_12342898_12343052_12345373_12345510_12346604_12346653_12348822_12348974_12349163_12349375_12353973_12354222_12355898_12356091_12356397_12356525_12358458_12358602_12362719_12362851_12363071_12363248_12368467_12368592_12369466_12369703_12373749_12373859_12378427_12378592_12379487_12379597_12382975_12383156_12385259_12385374_12386184_12386335_12400180_12400331_12401607_12401705_12403824_12403974_12415086_12415222_12416659_12416828_12455997_12456131_12460200_12460397_12497499_12497632_12506852_12507094_12508892
H1_mix_00007781	chr1	+	10969	52	FSM	ENSG00000048707.15	ENST00000011700.10	10969	52	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_22	39.7345865744469	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACCTTGTCACATGTAGC	1296	False	NA	21	True	AATAAA	-15	NA	12277120	12510361	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_12278039_12279498_12279651_12282704_12283737_12288222_12288314_12290997_12291125_12293523_12293705_12299201_12299385_12304505_12304729_12308430_12308642_12311453_12311626_12311812_12311926_12314114_12314328_12318071_12318338_12319496_12319631_12321808_12321965_12322535_12322747_12323705_12323781_12327647_12327855_12329828_12329919_12333225_12333367_12335704_12335828_12338230_12338306_12341782_12341886_12342898_12343052_12345373_12345510_12346604_12346653_12348822_12348974_12349163_12349375_12353973_12354222_12355898_12356091_12356397_12356525_12358458_12358602_12362719_12362851_12363071_12363248_12368467_12368592_12369466_12369703_12373749_12373859_12378427_12378592_12379487_12379597_12382975_12383156_12385259_12385374_12386184_12386335_12400180_12400331_12401607_12401705_12403824_12403974_12415086_12415222_12416659_12416828_12455997_12456131_12460200_12460397_12497499_12497632_12506852_12507094_12508892
H1_mix_00007782	chr1	+	4055	4	FSM	ENSG00000188984.12	ENST00000359318.8	4055	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.69967317119759	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCCACATCAATGGACTC	-4	True	NA	7	True	AATAAA	-17	NA	12716109	12728760	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_12716345_12719474_12719692_12720882_12720947_12725221
H1_mix_00007783	chr1	+	1015	7	NIC	ENSG00000116731.23	novel	2688	8	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_5	9.72396809720988	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTGTTCTGCAGCCCAGC	-1	True	NA	-72	True	NA	NA	NA	13700192	13823419	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_13700301_13730999_13731118_13732778_13732883_13742004_13742158_13749360_13749488_13816426_13816571_13823158
H1_mix_00007787	chr1	+	3775	21	FSM	ENSG00000116786.13	ENST00000642363.1	3775	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	53.6953210252067	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTGTCACTGGCCCTTTT	79	False	NA	21	True	AATAAA	-22	NA	15684555	15734769	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_15684619_15716236_15716344_15716706_15716817_15717892_15717993_15718537_15718626_15719733_15719921_15721328_15721389_15725316_15725546_15727013_15727069_15727191_15727833_15728078_15728149_15728266_15728358_15728668_15728734_15729101_15729191_15729796_15729930_15730531_15730723_15731191_15731258_15731888_15732049_15732349_15732530_15732611_15732729_15733796
H1_mix_00007789	chr1	+	12613	14	NIC	ENSG00000065526.12	novel	891	7	NA	NA	-99	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	27.0834782274989	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGTGAGTGTGATTGT	NA	False	NA	12	True	ATTAAA	-15	NA	15873402	15940456	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_15874396_15876201_15876679_15909320_15909482_15911100_15911302_15916127_15916280_15918925_15919052_15919403_15919518_15920869_15920984_15922248_15922350_15928090_15936267_15937162_15937646_15937811_15938007_15938717_15938877_15939295
H1_mix_00007790	chr1	+	327	2	FSM	ENSG00000224174.2	ENST00000452795.2	327	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAAAATTACGTTGGTT	NA	False	NA	14	True	AATAAA	-19	NA	16520693	16521796	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_16520788_16521563
H1_mix_00007791	chr1	+	1088	4	NIC	ENSG00000058453.17	novel	6660	37	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	56	junction_3	60.8331050224026	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTACAGCTGTGTCCCT	8907	False	NA	28	True	TTTAAA	-4	NA	16969784	16972964	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_16969935_16970252_16970454_16970635_16970768_16972359
H1_mix_00007792	chr1	+	1230	5	NNC	ENSG00000058453.17	novel	6660	37	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_4	54.2511520615	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTACAGCTGTGTCCCT	8927	False	NA	28	True	TTTAAA	-4	NA	16969804	16972964	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_16969935_16970252_16970454_16970635_16970768_16971464_16971627_16972359
H1_mix_00007793	chr1	+	5243	28	NNC	ENSG00000074964.17	novel	4625	29	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_18	67.5182848780013	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTGGACTTGGATTGAG	-37	True	NA	10	True	AATAAA	-12	NA	17539685	17697860	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_17539951_17580552_17580633_17587459_17587646_17588445_17588480_17602126_17602219_17603507_17603592_17607798_17607978_17616093_17616203_17619338_17619446_17621863_17621942_17622995_17623176_17624386_17624504_17625955_17626049_17627329_17627504_17632320_17632467_17634834_17635017_17637887_17638004_17638561_17638690_17639237_17639982_17640201_17640303_17648553_17648676_17654635_17654723_17655878_17656103_17656553_17656709_17664446_17664596_17687572_17687748_17695157_17695281_17696847
H1_mix_00007794	chr1	+	4611	28	NNC	ENSG00000074964.17	novel	4625	29	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	67.4968271367283	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTGGACTTGGATTGAG	-31	True	NA	10	True	AATAAA	-12	NA	17539691	17697860	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_17539955_17580552_17580633_17587459_17587646_17588445_17588480_17602126_17602219_17603507_17603592_17607801_17607978_17613057_17613175_17616093_17616203_17619338_17619446_17621863_17621942_17622995_17623176_17624386_17624504_17625955_17626049_17627329_17627504_17632320_17632467_17634834_17635017_17637887_17638004_17638561_17638690_17640201_17640303_17648553_17648676_17654635_17654723_17655878_17656103_17656553_17656709_17664446_17664596_17687572_17687748_17695157_17695281_17696847
H1_mix_00007795	chr1	+	1839	3	FSM	ENSG00000117148.8	ENST00000375406.2	1841	3	1	1	1	1	multi-exon	FALSE	canonical	1	2	junction_1	0.5	271	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGGCTCCTGTGATGGA	-15	True	NA	6	True	AATAAA	-18	NA	17755333	17827062	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_17755505_17822984_17823357_17825766
H1_mix_00007796	chr1	+	556	2	FSM	ENSG00000117154.12	ENST00000473951.1	560	2	4	0	4	0	multi-exon	FALSE	canonical	3	168	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCATGTATCGCTGCACC	NA	False	NA	NA	False	NA	NA	NA	18375960	18376920	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_18376396_18376799
H1_mix_00007797	chr1	+	1242	9	NNC	ENSG00000053372.5	novel	2049	8	NA	NA	-243	39123	at_least_one_novel_splicesite	FALSE	canonical	2	103	junction_8	106.388145486234	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAAACCCCATCTCTACT	-10	True	NA	NA	False	NA	NA	NA	19251561	19299251	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_19251864_19254781_19254841_19255947_19256052_19257063_19257146_19257453_19257522_19257832_19257985_19258476_19258554_19258680_19259048_19299220
H1_mix_00007798	chr1	+	2636	8	NIC	ENSG00000040487.13	novel	1805	9	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_7	31.5219392338293	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTACCTCCCCATGAGACC	NA	False	NA	9	True	AATAAA	-18	NA	19312293	19329284	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_19312359_19312728_19312890_19317599_19317842_19324632_19324763_19325494_19325583_19326244_19326388_19326530_19326624_19327570
H1_mix_00007799	chr1	+	256	1	FSM	ENSG00000240490.3	ENST00000481521.3	288	1	173	-141	173	141	mono-exon	FALSE	NA	NA	NA	NA	NA	250	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACCATCATCCTGGATTT	NA	False	NA	NA	False	NA	NA	NA	19424556	19424812	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_19424600_19424800
H1_mix_00007800	chr1	+	2064	4	FSM	ENSG00000158747.15	ENST00000602662.1	1623	4	-30	-411	-30	11	multi-exon	FALSE	canonical	0	0	junction_1	39.8357739838062	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGACTGGCTCTGCCGACC	NA	False	NA	39	True	AATAAA	-29	NA	19596948	19658467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_19597110_19655011_19655201_19655323_19655436_19656865
H1_mix_00007801	chr1	+	623	2	NIC	ENSG00000158825.6	novel	762	3	NA	NA	14	-2	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCAAAGCGTGTGTCTTGC	21	True	NA	18	True	TATAAA	-18	NA	20589110	20618901	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_20589284_20618451
H1_mix_00007803	chr1	+	2395	2	Genic_Genomic	ENSG00000070831.17	novel	1645	7	NA	NA	-20347	-29356	multi-exon	FALSE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTAATCTGATGAATCCAA	2154	False	NA	NA	False	CATAAA	-26	NA	22005163	22057359	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_+_22005177_22054977
H1_mix_00007805	chr1	+	1278	3	ISM	ENSG00000070886.12	ENST00000374644.8	1802	5	-222	12580	-147	-12580	5prime_fragment	FALSE	canonical	3	57	junction_2	2	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCGAGGCCACCTGTGTC	NA	False	NA	NA	False	GATAAA	-26	NA	22563341	22577041	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_22563730_22569288_22569354_22576216
H1_mix_00007806	chr1	+	1648	4	NNC	ENSG00000070886.12	novel	1802	5	NA	NA	-31	-6299	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	27.3901847788988	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGCGTGGATTAATCTG	NA	False	NA	2	True	ATTAAA	-14	NA	22563457	22583322	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_22563730_22569288_22569354_22576216_22576881_22582675
H1_mix_00007807	chr1	+	595	6	NNC	ENSG00000142676.14	novel	660	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	4814.17048306352	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCAATTCTGTTGTGTG	5	True	NA	15	True	AATAAA	-44	NA	23691805	23696417	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_23691830_23692611_23692760_23693806_23693911_23694657_23694792_23695797_23695909_23696343
H1_mix_00007810	chr1	+	574	5	NNC	ENSG00000142676.14	novel	1017	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	4740.91617596219	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCAATTCTGTTGTGTG	808	False	NA	15	True	AATAAA	-44	NA	23692608	23696417	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_23692760_23693806_23693913_23694659_23694792_23695797_23695909_23696343
H1_mix_00007811	chr1	+	501	4	FSM	ENSG00000011007.13	ENST00000487554.1	501	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	199.982221432029	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACCTGGAAAGCCACGGG	553	False	NA	NA	False	NA	NA	NA	23744033	23750944	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_23744271_23749020_23749078_23749841_23749949_23750844
H1_mix_00007813	chr1	+	450	6	FSM	ENSG00000011009.11	ENST00000421070.1	429	6	-21	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	838.525372305454	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCAAGAAGGCAGCAGAGA	-6	True	NA	NA	False	GGGGCT	-31	NA	23791970	23793907	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_23792018_23792551_23792761_23793007_23793040_23793150_23793217_23793704_23793753_23793859
H1_mix_00007814	chr1	+	822	3	FSM	ENSG00000011009.11	ENST00000472213.1	822	3	0	0	0	0	multi-exon	FALSE	canonical	3	1919	junction_1	7.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACCTCAGGGTTTGGCCC	430	False	NA	NA	False	NA	NA	NA	23794091	23795081	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_23794137_23794223_23794601_23794681
H1_mix_00007816	chr1	+	968	5	FSM	ENSG00000183726.11	ENST00000491936.5	965	5	-3	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	462.020291762169	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCACCATGGTCCAGCCAC	-5	True	NA	NA	False	NA	NA	NA	25338316	25361265	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_25338457_25351625_25351694_25352881_25352975_25356792_25356854_25360659
H1_mix_00007817	chr1	+	662	1	FSM	ENSG00000238084.4	ENST00000419297.2	478	1	31	-215	31	215	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTAATGGGGTTGCCTC	39	False	NA	NA	False	NA	NA	NA	25398751	25399413	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_25398800_25399400
H1_mix_00007818	chr1	+	1173	6	FSM	ENSG00000117640.18	ENST00000526894.5	733	6	0	-440	0	440	multi-exon	FALSE	canonical	0	0	junction_5	99.2681217712917	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGTCCATTGTGCAAACA	8	True	NA	NA	False	CATAAA	-26	NA	25819978	25830271	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_25820030_25823018_25823129_25823643_25823749_25826301_25826412_25826614_25826827_25829686
H1_mix_00007820	chr1	+	2099	7	FSM	ENSG00000117640.18	ENST00000374301.7	2099	7	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	90.3451714260369	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATTTGCTGTGTCCATCT	-11	True	NA	13	True	ATTAAA	-21	NA	25820192	25832938	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_25820415_25823018_25823129_25823643_25823749_25826301_25826412_25826614_25826827_25829508_25829831_25831920
H1_mix_00007821	chr1	+	4010	11	FSM	ENSG00000158008.10	ENST00000374280.4	4020	11	-6	16	-6	-16	multi-exon	FALSE	canonical	0	0	junction_3	2.44131112314674	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCTCCAGGCTATAAATACC	-8	True	NA	NA	False	AATAAA	-22	NA	26021768	26036448	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26023426_26029192_26029287_26029599_26029708_26030475_26030596_26031131_26031265_26031459_26031567_26032395_26032486_26033228_26033316_26033695_26033857_26034835_26035005_26035164
H1_mix_00007822	chr1	+	2799	2	FSM	ENSG00000197245.6	ENST00000374268.5	2799	2	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCGGGCTGACTCTGGTC	1	True	NA	NA	False	AATAAA	-14	NA	26159078	26163962	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26159127_26161211
H1_mix_00007823	chr1	+	935	2	FSM	ENSG00000142684.9	ENST00000270812.6	698	2	0	-237	0	237	multi-exon	FALSE	canonical	3	352	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGAAGGCTTCTGAGAT	13	True	NA	NA	False	NA	NA	NA	26169941	26171110	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26170184_26170417
H1_mix_00007825	chr1	+	1726	10	FSM	ENSG00000188782.9	ENST00000456354.7	1867	10	141	0	115	0	multi-exon	FALSE	canonical	0	0	junction_1	2.28251539824157	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGTCTCTGACTGGTGG	141	False	NA	NA	False	AATAAA	-15	NA	26190742	26202964	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26190841_26191286_26191431_26193786_26193889_26197685_26197784_26197956_26198078_26198285_26198420_26199883_26200059_26200829_26201042_26201353_26201520_26202488
H1_mix_00007828	chr1	+	3344	9	NIC	ENSG00000117682.17	novel	703	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	73.1384602996262	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGATGTAAAACTTGTTTG	14	True	NA	9	True	AATAGA	-15	NA	26432397	26471294	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_26432519_26432890_26433009_26438167_26438285_26442730_26442874_26446315_26446433_26447558_26447661_26457790_26457906_26460036_26460145_26468891
H1_mix_00007830	chr1	+	1465	1	FSM	ENSG00000117713.21	ENST00000636110.1	3450	1	56	1929	56	-497	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACAGCGAGCCAAGATCAC	NA	False	NA	NA	False	NA	NA	NA	26769229	26770694	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26769200_26770700
H1_mix_00007831	chr1	+	411	2	FSM	ENSG00000172746.6	ENST00000310055.5	497	2	0	86	0	-86	multi-exon	FALSE	canonical	0	0	junction_1	0	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGGCTGCAATGTTGAT	85	False	NA	NA	False	ATTAAA	-23	NA	26980164	26980889	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_26980515_26980828
H1_mix_00007832	chr1	+	867	1	FSM	ENSG00000225159.1	ENST00000449818.1	867	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATAGTTTCAACAATTT	NA	False	NA	NA	False	NA	NA	NA	27206929	27207796	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_27206900_27207800
H1_mix_00007834	chr1	+	2296	13	NIC	ENSG00000142765.18	novel	1936	15	NA	NA	15	0	intron_retention	FALSE	canonical	3	11	junction_2	30.5623224830109	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAAGGCTGGTGTCTGCTG	-16	True	NA	NA	False	AATAAA	-18	NA	27342036	27353932	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_27342151_27345296_27345526_27347420_27347570_27347807_27347881_27347966_27348013_27349079_27349153_27349397_27349499_27349651_27349766_27349971_27350486_27350793_27350953_27351257_27351556_27353282_27353489_27353712
H1_mix_00007835	chr1	+	372	1	FSM	ENSG00000231344.1	ENST00000446554.1	349	1	-57	34	-57	-34	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTCGTGGAAATGTTTT	NA	False	NA	NA	False	NA	NA	NA	27739033	27739405	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_27739000_27739400
H1_mix_00007836	chr1	+	1647	5	FSM	ENSG00000130775.16	ENST00000373925.5	1650	5	0	3	0	-3	multi-exon	FALSE	canonical	2	2	junction_3	32.9431328200583	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACGGTATCATTTATTAAA	-5	True	NA	26	True	AATAAA	-29	NA	27872543	27886682	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_27872666_27876587_27876729_27879643_27880055_27885294_27885452_27885866
H1_mix_00007837	chr1	+	408	3	FSM	ENSG00000130770.18	ENST00000468425.2	539	3	-18	149	0	-149	multi-exon	FALSE	canonical	2	92	junction_2	1975.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACATTGAAAAACACAGA	-15	True	NA	NA	False	AATACA	-43	NA	28236123	28246757	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_28236271_28236360_28236453_28246588
H1_mix_00007838	chr1	+	383	2	FSM	ENSG00000130772.14	ENST00000475655.1	315	2	-38	-30	-16	30	multi-exon	FALSE	canonical	3	53	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACAGTTTCTGGCACCCA	-33	True	NA	NA	False	NA	NA	NA	28329023	28330822	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_28329181_28330596
H1_mix_00007839	chr1	+	431	4	FSM	ENSG00000204138.13	ENST00000633167.1	553	4	122	0	102	0	multi-exon	TRUE	canonical	1	2	junction_1	28.5773803324704	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAGGTGAGTTTACAAAT	21	True	NA	NA	False	NA	NA	NA	28438272	28460286	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_28438431_28457831_28457856_28459084_28459259_28460211
H1_mix_00007840	chr1	+	2686	14	FSM	ENSG00000180198.17	ENST00000649185.1	2686	14	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	240.374215159633	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTAGAGTTTTATAAAAT	NA	False	NA	83	True	NA	NA	NA	28505979	28538968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_28506085_28508127_28508161_28508829_28508906_28516724_28516868_28529857_28529940_28530522_28530616_28531802_28531991_28532170_28532351_28535049_28535147_28535257_28535381_28535870_28536027_28536261_28536382_28536746_28536900_28537831
H1_mix_00007842	chr1	+	497	6	FSM	ENSG00000180098.9	ENST00000495215.5	483	6	-14	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	88.1852595392223	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCGAGCCCTGACGGAGT	138	False	NA	NA	False	NA	NA	NA	28553232	28567332	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_28553308_28553639_28553738_28560632_28560733_28561345_28561399_28564702_28564835_28567293
H1_mix_00007844	chr1	+	4702	11	NNC	ENSG00000162419.13	novel	6358	10	NA	NA	-47	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	17.9613473882112	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTTCATATGAAGGTTC	2	True	NA	18	True	AATAAA	-22	NA	28668730	28719353	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_28668840_28683582_28683741_28690103_28690187_28691584_28691710_28692941_28693046_28696926_28697085_28702437_28702570_28704191_28704330_28710519_28710643_28714072_28715760_28717468
H1_mix_00007845	chr1	+	2044	9	FSM	ENSG00000162419.13	ENST00000480454.1	2063	9	19	0	19	0	multi-exon	FALSE	canonical	3	28	junction_1	10.7819293264239	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCATTTCCAGGCTCGT	NA	False	NA	117	True	NA	NA	NA	28683582	28715065	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_28683741_28690073_28690187_28691584_28691710_28692941_28693046_28696926_28697085_28702437_28702570_28704191_28704330_28710519_28710643_28714072
H1_mix_00007846	chr1	+	3744	18	NIC	ENSG00000159023.22	novel	5772	18	NA	NA	-1	-803	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	103.23011550611	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTCATTTTGATTTTT	4	True	NA	NA	False	GGGGCT	-10	NA	28887117	29118043	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_28887211_28987447_28987906_28993329_28993543_28997214_28997320_29011864_29011908_29015691_29015768_29018223_29018443_29030399_29030488_29033092_29033246_29035825_29035924_29039253_29039427_29053106_29053313_29064981_29065159_29097806_29097936_29109335_29109438_29112367_29112449_29115698_29115804_29116818
H1_mix_00007847	chr1	+	2095	13	FSM	ENSG00000159023.22	ENST00000646260.1	2501	13	406	0	36	0	multi-exon	FALSE	canonical	0	0	junction_1	104.125291782971	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTGTCCACATGACCAA	6602	False	NA	NA	False	NA	NA	NA	28893776	29065163	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_28893838_28987430_28987906_28993329_28993543_28997214_28997320_29011864_29011908_29015691_29015768_29018223_29018443_29030399_29030488_29033092_29033246_29035825_29035924_29039253_29039427_29053103_29053313_29064981
H1_mix_00007848	chr1	+	3836	18	NIC	ENSG00000159023.22	novel	6031	21	NA	NA	0	-803	combination_of_known_junctions	FALSE	canonical	3	40	junction_15	100.421154666227	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTCATTTTGATTTTT	12	True	NA	NA	False	GGGGCT	-10	NA	28914561	29118043	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_28914769_28987430_28987906_28993329_28993543_28997214_28997320_29011864_29011908_29015691_29015768_29018223_29018443_29030399_29030488_29033092_29033246_29035825_29035924_29039253_29039427_29053106_29053313_29060421_29060485_29064981_29065159_29097806_29097936_29112367_29112449_29115698_29115804_29116818
H1_mix_00007850	chr1	+	4235	22	NIC	ENSG00000060656.20	novel	1590	14	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_6	49.3849243018486	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGCAGCCCTGTGTGTGT	-4	True	NA	28	True	AATAAA	-19	NA	29260182	29326800	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_29260268_29260609_29260904_29275447_29275757_29279011_29279122_29279455_29279658_29280038_29280142_29291868_29292027_29303854_29304046_29304773_29304850_29305351_29305429_29310743_29310781_29311455_29311554_29311642_29311760_29312551_29312707_29315371_29315508_29316001_29316152_29317747_29317922_29320684_29320826_29323370_29323497_29323630_29323789_29325190_29325327_29325598
H1_mix_00007851	chr1	+	5840	1	Intergenic	novelGene_20	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGAGTGAGTCTTTTGCTT	NA	False	NA	NA	False	AATAAA	-34	NA	30304368	30310208	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_30304400_30310200
H1_mix_00007852	chr1	+	1648	7	FSM	ENSG00000121766.16	ENST00000615916.4	1652	7	4	0	4	0	multi-exon	FALSE	canonical	0	0	junction_1	253.986712250858	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATAATCCTTCTTCCTGG	4	True	NA	49	True	ACTAAA	-40	NA	31296985	31364953	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_31297214_31319108_31319167_31337174_31337276_31338956_31339049_31346639_31346741_31348828_31348975_31364031
H1_mix_00007854	chr1	+	1922	11	FSM	ENSG00000168528.12	ENST00000373710.5	2146	11	224	0	224	0	multi-exon	FALSE	canonical	0	0	junction_1	109.553137791667	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCTGTGCCCCTCACCC	12	False	NA	27	True	AATAAA	-19	NA	31409788	31434677	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_31409853_31410384_31410436_31423692_31423855_31424682_31424874_31425329_31425410_31425775_31425914_31426653_31426824_31428977_31429069_31429396_31429539_31432966_31433186_31434063
H1_mix_00007855	chr1	+	2687	5	FSM	ENSG00000160050.16	ENST00000680046.1	2667	5	-20	0	0	0	multi-exon	FALSE	canonical	3	291	junction_2	17.5285481429581	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGAGGTACCGCCTGCG	2	True	NA	NA	False	NA	NA	NA	32200632	32205453	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32200710_32201912_32204046_32204185_32204380_32204597_32204621_32205193
H1_mix_00007856	chr1	+	1501	12	FSM	ENSG00000084623.12	ENST00000676801.1	1849	12	348	0	147	0	multi-exon	FALSE	canonical	1	1	junction_1	488.10380280638	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGCAAAACTCCGTCTCAA	287	False	NA	-98	True	NA	NA	NA	32221870	32231473	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32222033_32222357_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
H1_mix_00007857	chr1	+	989	7	FSM	ENSG00000084623.12	ENST00000679290.1	987	7	-2	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	589.200211209135	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGGTGTCTGTTTC	1	True	NA	31	True	AATAAA	-32	NA	32222404	32231602	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32222445_32222537_32222631_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
H1_mix_00007858	chr1	+	1503	10	FSM	ENSG00000084623.12	ENST00000677676.1	1503	10	0	0	0	0	multi-exon	FALSE	canonical	3	929	junction_1	248.583294533216	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGGTGTCTGTTTC	1	True	NA	31	True	AATAAA	-32	NA	32222404	32231602	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
H1_mix_00007859	chr1	+	1417	11	FSM	ENSG00000084623.12	ENST00000373586.2	1417	11	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_10	497.342175971433	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGGTGTCTGTTTCAT	1	True	NA	33	True	AATAAA	-34	NA	32222404	32231604	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231120
H1_mix_00007860	chr1	+	1717	12	FSM	ENSG00000084623.12	ENST00000678150.1	1715	12	-2	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	611.590826323429	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAAGCCCTTCTGAATGT	1	True	NA	NA	False	AATAAA	-19	NA	32222404	32236170	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32234423_32234550_32235512
H1_mix_00007862	chr1	+	433	2	Intergenic	novelGene_24	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCCTAGGCTACAGCCACA	NA	False	NA	NA	False	ACTAAA	-19	NA	32432865	32435140	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_32432898_32434739
H1_mix_00007865	chr1	+	220	1	FSM	ENSG00000278966.2	ENST00000623226.1	375	1	-1	156	-1	-156	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCACCCATCCGATTTCTC	9550	False	NA	NA	False	AATGAA	-35	NA	32973665	32973885	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_32973700_32973900
H1_mix_00007866	chr1	+	405	3	FSM	ENSG00000142920.17	ENST00000495135.5	429	3	24	0	9	0	multi-exon	FALSE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCCCTGCCCGCACGGT	28	False	NA	NA	False	GGGGCT	-23	NA	33081184	33084127	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_33081295_33081387_33081509_33083953
H1_mix_00007867	chr1	+	4453	12	NNC	ENSG00000197056.11	novel	4203	11	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	48.7281207524579	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATGTTTTGATCTTTCC	NA	False	NA	11	True	ATTAAA	-16	NA	35079347	35115854	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_35079443_35080746_35080909_35093343_35093442_35093913_35094084_35095818_35095892_35097316_35097567_35104294_35104470_35104556_35104770_35110293_35110448_35111771_35111913_35112086_35112131_35112976
H1_mix_00007868	chr1	+	7249	30	NNC	ENSG00000146463.12	novel	7366	30	NA	NA	12	-114	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	76.2209224103177	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGAGTTCTTCTTCTTT	18	True	NA	10	True	AATAAA	-20	NA	35268720	35421944	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_35269095_35325359_35325406_35358924_35359447_35361193_35361256_35361618_35361790_35370028_35370114_35370371_35370628_35381258_35381434_35381545_35381759_35385441_35385593_35386073_35386190_35387002_35387279_35387453_35387605_35388909_35389083_35389947_35390099_35392211_35392353_35392646_35392685_35393594_35393740_35396551_35396671_35397376_35397546_35398412_35398467_35398863_35399044_35399481_35399577_35405022_35405195_35405372_35405469_35408007_35408160_35413971_35414084_35415465_35415715_35418442_35418573_35419469
H1_mix_00007869	chr1	+	6485	27	NIC	ENSG00000146463.12	novel	7366	30	NA	NA	12	-114	combination_of_known_splicesites	FALSE	canonical	3	57	junction_2	76.3423851036474	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGAGTTCTTCTTCTTT	18	True	NA	10	True	AATAAA	-20	NA	35268720	35421944	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_35269086_35325359_35325406_35370028_35370114_35370371_35370628_35381258_35381434_35381545_35381759_35385441_35385593_35386073_35386190_35387002_35387279_35387453_35387605_35388909_35389083_35389947_35390099_35392211_35392353_35392646_35392685_35393594_35393740_35396551_35396671_35397376_35397546_35398412_35398467_35398863_35399044_35399481_35399577_35405022_35405195_35405372_35405469_35408007_35408160_35413971_35414084_35415465_35415715_35418442_35418573_35419469
H1_mix_00007870	chr1	+	5881	25	NIC	ENSG00000146463.12	novel	7366	30	NA	NA	-49	-114	combination_of_known_splicesites	FALSE	canonical	1	4	junction_2	84.8944503977341	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGAGTTCTTCTTCTTT	17	False	NA	10	True	AATAAA	-20	NA	35268983	35421944	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_35269086_35325359_35325406_35381258_35381434_35381545_35381759_35385441_35385593_35386073_35386190_35387002_35387279_35387453_35387605_35388909_35389083_35389947_35390099_35392211_35392353_35392646_35392685_35393594_35393740_35396551_35396671_35397376_35397546_35398412_35398467_35398863_35399044_35399481_35399577_35405022_35405195_35405372_35405469_35408007_35408160_35413971_35414084_35415465_35415715_35418442_35418573_35419469
H1_mix_00007872	chr1	+	2127	11	NIC	ENSG00000116871.16	novel	3238	18	NA	NA	-52	0	combination_of_known_junctions	TRUE	canonical	3	70	junction_5	92.9976343785152	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCCCCCGGCGGGCGGGA	-51	True	NA	NA	False	NA	NA	NA	36156107	36178822	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_36156464_36170970_36171316_36171512_36171582_36172463_36172628_36173363_36173479_36176198_36176322_36176417_36176582_36176696_36176843_36177872_36178202_36178418_36178597_36178684
H1_mix_00007874	chr1	+	4397	11	NNC	ENSG00000054118.15	novel	4405	12	NA	NA	-87	0	intron_retention	FALSE	canonical	0	0	junction_3	211.59699903354	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTTCTGTTCATTGTCAT	NA	False	NA	20	True	AATAAA	-24	NA	36224344	36305357	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_36224506_36282532_36282701_36286367_36287271_36289059_36289765_36291373_36291547_36292597_36292710_36293850_36293936_36296582_36296771_36300885_36301085_36301555_36301697_36303795
H1_mix_00007875	chr1	+	2574	2	FSM	ENSG00000284705.1	ENST00000641463.1	2694	2	35	85	35	-85	multi-exon	FALSE	canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCCCTCTCTCTCTC	NA	False	NA	NA	False	ATTAAA	-20	NA	36703987	36710497	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_36705317_36709252
H1_mix_00007876	chr1	+	202	1	FSM	ENSG00000232273.1	ENST00000437933.1	532	1	499	-169	499	169	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCCCACCAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-20	NA	37545261	37545463	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_37545300_37545500
H1_mix_00007877	chr1	+	3435	2	Intergenic	novelGene_28	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	36	junction_1	0	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	10	True	AATAAA	-22	NA	38425445	38430743	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_38425673_38427535
H1_mix_00007878	chr1	+	1499	3	Intergenic	novelGene_31	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	4.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTGTTTGGTGGTCTCT	NA	False	NA	8	True	AATAAA	-20	NA	38425453	38430741	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_38425673_38426725_38427623_38430358
H1_mix_00007879	chr1	+	5278	1	Intergenic	novelGene_32	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGTGGTCTCTTCACA	NA	False	NA	13	True	AATAAA	-25	NA	38425468	38430746	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_38425500_38430700
H1_mix_00007880	chr1	+	439	2	FSM	ENSG00000228436.4	ENST00000456813.2	501	2	58	4	58	-4	multi-exon	FALSE	canonical	1	1	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATATGCTGGTTGCTTTA	58	False	NA	NA	False	AATATA	-14	NA	38860082	38876222	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_38860240_38875940
H1_mix_00007881	chr1	+	17393	92	NIC	ENSG00000127603.32	novel	14496	71	NA	NA	77	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_47	123.806463212924	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTATTTCCTGATTTTC	182	False	NA	NA	False	ATTAAA	-21	NA	39105581	39486987	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_39105718_39231181_39231244_39250013_39250104_39254297_39254376_39257935_39258029_39282207_39282375_39283188_39283302_39283408_39283516_39284065_39284186_39284332_39284429_39285082_39285211_39285296_39285391_39285603_39285759_39287285_39287563_39291909_39292039_39292765_39292844_39293457_39293620_39295045_39295151_39295786_39295883_39297619_39297746_39300209_39300363_39302923_39303079_39309569_39309697_39310244_39310429_39310830_39311001_39315512_39315692_39316390_39316530_39317213_39317408_39318452_39318616_39319663_39319748_39322607_39322716_39322909_39323009_39324192_39324346_39324645_39324735_39327217_39327354_39349477_39349628_39350784_39351019_39353006_39353232_39357374_39357894_39358696_39358874_39359140_39359265_39360792_39361002_39361359_39361678_39368147_39368315_39370029_39370187_39372478_39372597_39378460_39378524_39379202_39379445_39380243_39380374_39381952_39382153_39385433_39385930_39387186_39388659_39422373_39422536_39422729_39422901_39424027_39424195_39427454_39427615_39427960_39428288_39429241_39429327_39429826_39430069_39430701_39430909_39432534_39432655_39433047_39433156_39434413_39434633_39435557_39435762_39437776_39438009_39439273_39439501_39441002_39441126_39441223_39441326_39441951_39442054_39442146_39442321_39442411_39442568_39442713_39442912_39443445_39443575_39444661_39444836_39447431_39447588_39447691_39447899_39448032_39448153_39448593_39448764_39451051_39451212_39452155_39452351_39452683_39452813_39453706_39453851_39454908_39455098_39458369_39458491_39459085_39459250_39460631_39460795_39461882_39462038_39463611_39463687_39468614_39468733_39479797_39480010_39484600_39484731_39485537
H1_mix_00007882	chr1	+	7232	42	NIC	ENSG00000127603.32	novel	7104	41	NA	NA	349	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	102.71654046891	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAGTGTTTAAGGAACTC	3255	False	NA	9	True	ATTAAA	-13	NA	39414331	39486217	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_39414478_39422373_39422536_39422729_39422901_39424027_39424195_39427454_39427615_39427960_39428288_39429241_39429327_39429826_39430069_39430701_39430909_39432534_39432655_39433047_39433156_39434413_39434633_39435557_39435762_39436481_39436491_39437776_39438009_39439273_39439501_39441002_39441126_39441223_39441326_39441951_39442054_39442146_39442321_39442411_39442568_39442713_39442912_39443445_39443575_39444661_39444836_39447431_39447588_39447691_39447899_39448032_39448153_39448593_39448764_39451051_39451212_39452155_39452351_39452683_39452813_39453706_39453851_39454908_39455098_39458369_39458491_39459085_39459250_39460631_39460795_39461882_39462038_39463611_39463687_39468614_39468733_39479797_39480010_39484600_39484731_39485537
H1_mix_00007884	chr1	+	3757	1	FSM	ENSG00000237624.1	ENST00000447263.1	1535	1	-72	-2150	-72	2150	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCCTGCCTAAGAATGGG	NA	False	NA	NA	False	NA	NA	NA	39514883	39518640	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_39514900_39518600
H1_mix_00007886	chr1	+	1902	12	FSM	ENSG00000168389.18	ENST00000420632.6	1914	12	12	0	12	0	multi-exon	FALSE	canonical	0	0	junction_1	20.0606518355241	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTGTCCTCAGCCACT	NA	False	NA	28	True	CATAAA	-25	NA	39955123	39969968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_39955386_39965210_39965335_39965470_39965550_39965856_39966015_39966600_39966692_39966810_39966933_39967085_39967170_39967627_39967712_39967803_39967917_39968333_39968478_39968568_39968746_39969504
H1_mix_00007887	chr1	+	725	1	FSM	ENSG00000228477.1	ENST00000438210.1	725	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTTTTATACAAGAGAAGT	7529	False	NA	NA	False	NA	NA	NA	39962679	39963404	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_39962700_39963400
H1_mix_00007888	chr1	+	5058	5	Fusion	ENSG00000260920.2_ENSG00000187801.15	novel	2109	6	NA	NA	14	0	multi-exon	FALSE	canonical	3	13	junction_2	8.27647267862342	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTATATGTGAGGAAATAT	26	True	NA	22	True	AGTAAA	-32	NA	40450120	40466767	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_+_40450176_40450655_40451089_40456944_40457072_40457343_40457440_40462420
H1_mix_00007889	chr1	+	363	3	FSM	ENSG00000187815.10	ENST00000482712.1	542	3	0	179	0	-179	multi-exon	FALSE	canonical	0	0	junction_2	18	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCCCCTTACACCTTTTG	NA	False	NA	NA	False	AAGAAA	-23	NA	40489145	40490977	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_40489215_40489528_40489625_40490779
H1_mix_00007890	chr1	+	1543	11	FSM	ENSG00000066136.21	ENST00000425457.6	1536	11	-7	0	5	0	multi-exon	TRUE	canonical	3	17	junction_8	102.68417599611	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAATATTTCTCCTTTTG	-9	True	NA	37	True	ATTAAA	-38	NA	40691708	40771139	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_40691868_40738835_40738949_40747533_40747606_40749572_40749687_40753150_40753247_40758120_40758295_40762887_40763047_40766595_40766704_40766917_40766975_40769355_40769416_40770708
H1_mix_00007894	chr1	+	2122	2	FSM	ENSG00000186409.18	ENST00000670292.1	2743	2	618	3	-533	-3	multi-exon	FALSE	canonical	2	4	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGGATGTAAATTTTTTA	NA	False	NA	NA	False	AATAAA	-10	NA	42479927	42484145	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_42480567_42482662
H1_mix_00007896	chr1	+	768	3	FSM	ENSG00000164008.17	ENST00000650521.1	768	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	86	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTATATATATATATATAT	29	True	NA	45	True	CATAAA	-42	NA	42767305	42775759	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_42767391_42774736_42774869_42775208
H1_mix_00007897	chr1	+	818	4	FSM	ENSG00000164008.17	ENST00000685942.1	896	4	42	36	1	-23	multi-exon	FALSE	canonical	3	16	junction_1	75.5836549056004	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGAGAGAACTGTTTTCA	43	False	NA	22	True	CATAAA	-19	NA	42767319	42775736	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_42767391_42773562_42773650_42774736_42774869_42775208
H1_mix_00007898	chr1	+	4061	23	FSM	ENSG00000243710.8	ENST00000372492.9	4063	23	0	2	0	1	multi-exon	FALSE	canonical	0	0	junction_1	1.42367816030598	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTTGTCTAACTTCTGCT	-16	True	NA	NA	False	AATAAA	-13	NA	43172329	43254356	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43172454_43172734_43172911_43181533_43181851_43183590_43183878_43185148_43185357_43186706_43186860_43197552_43197693_43198480_43198647_43199389_43199504_43206719_43206933_43209742_43209917_43215254_43215417_43219381_43219538_43221371_43221466_43222104_43222296_43222823_43222998_43224045_43224205_43226982_43227127_43232507_43232625_43234278_43234414_43234494_43234639_43243226_43243360_43253976
H1_mix_00007899	chr1	+	1702	4	FSM	ENSG00000179178.11	ENST00000439858.6	1797	4	95	0	31	0	multi-exon	FALSE	canonical	0	0	junction_1	83.4838640430326	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGGATCTCACCTCAGA	64	False	NA	28	True	AATAAA	-29	NA	43270077	43274002	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43270086_43270680_43270794_43272183_43272340_43272577
H1_mix_00007900	chr1	+	1688	3	NNC	ENSG00000179178.11	novel	567	3	NA	NA	201	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	83.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGGATCTCACCTCAGA	451	False	NA	28	True	AATAAA	-29	NA	43271146	43274002	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_43271254_43272183_43272340_43272577
H1_mix_00007901	chr1	+	8586	61	NNC	ENSG00000198198.17	novel	14136	72	NA	NA	1347	-238	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_21	6.60578450215331	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGACCACTGAATGTCACT	4122	False	NA	NA	False	NA	NA	NA	43422103	43450489	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_43422226_43422479_43422633_43422768_43422884_43423098_43423317_43424216_43424433_43424783_43424863_43425112_43425208_43425473_43425643_43425834_43425950_43426037_43426152_43426437_43426539_43426714_43426810_43427055_43427180_43427280_43427446_43427529_43427735_43428002_43428119_43428239_43428487_43429702_43429845_43430010_43430104_43430310_43430390_43430495_43430790_43430953_43431091_43431264_43431373_43431459_43431524_43431715_43431902_43432271_43432440_43432516_43432605_43432727_43432800_43432988_43433191_43434385_43434486_43435199_43435330_43437170_43437324_43437405_43437509_43437594_43437701_43437790_43437903_43438698_43438818_43438928_43439094_43439357_43439443_43439604_43439770_43439880_43440049_43440452_43440587_43441213_43441381_43441503_43441602_43441685_43441819_43441999_43442131_43442267_43442369_43442441_43442619_43442818_43443087_43443187_43443268_43443351_43443478_43443596_43443797_43445893_43445985_43446178_43446260_43446341_43446417_43446954_43447169_43447544_43447699_43447848_43447972_43448078_43448485_43448611_43448729_43450102_43450172_43450336
H1_mix_00007902	chr1	+	374	3	FSM	ENSG00000198198.17	ENST00000478140.1	543	3	169	0	169	0	multi-exon	FALSE	canonical	2	3	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCACCGCTCTTCCTGC	NA	False	NA	NA	False	NA	NA	NA	43430010	43430697	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43430104_43430310_43430390_43430495
H1_mix_00007903	chr1	+	6312	25	FSM	ENSG00000142949.17	ENST00000429895.5	6312	25	0	0	0	0	multi-exon	FALSE	canonical	1	35	junction_6	209.124659626475	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCTTACAAACCAGGACT	100	False	NA	6	True	AATAAA	-14	NA	43591052	43623654	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43591554_43591811_43591949_43592456_43592602_43597747_43598054_43598719_43598914_43603415_43603528_43603610_43604190_43604902_43605001_43605189_43605444_43605528_43605623_43606239_43606459_43606813_43606969_43609382_43609499_43613617_43613716_43617444_43617569_43617735_43617912_43618629_43618750_43619047_43619203_43619287_43619574_43619679_43619859_43620094_43620222_43620453_43620580_43620837_43620993_43621096_43621233_43621934
H1_mix_00007904	chr1	+	308	2	FSM	ENSG00000126091.21	ENST00000646776.1	3218	2	0	2910	0	-2910	multi-exon	FALSE	canonical	3	41	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGTTGCAGGTCAGTT	34	False	NA	NA	False	NA	NA	NA	43707565	43736412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_43707694_43736232
H1_mix_00007905	chr1	+	1371	5	NIC	ENSG00000117407.17	novel	1439	5	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	32	junction_3	23.0583498975967	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTCTGTGGCTTGTCAG	-2	True	NA	27	True	NA	NA	NA	43933800	43937237	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_43933886_43934111_43934261_43935654_43935717_43936092_43936232_43936301
H1_mix_00007906	chr1	+	1465	4	NIC	ENSG00000117407.17	novel	1439	5	NA	NA	0	-2	intron_retention	FALSE	canonical	3	25	junction_3	28.2410261066335	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTCTGTGGCTTGTCAG	-2	True	NA	27	True	NA	NA	NA	43933800	43937237	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_43933886_43934111_43934261_43935654_43935717_43936068
H1_mix_00007909	chr1	+	1338	8	NIC	ENSG00000159214.13	novel	1472	9	NA	NA	-12	0	intron_retention	FALSE	canonical	3	16	junction_1	34.2761891530716	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	25	True	NA	16	True	ATTAAA	-18	NA	43991829	43996528	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_43992005_43992211_43992388_43992522_43992640_43993889_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
H1_mix_00007911	chr1	+	1265	7	NIC	ENSG00000159214.13	novel	1472	9	NA	NA	3	0	intron_retention	FALSE	canonical	3	6	junction_2	40.4670647976022	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	40	False	NA	16	True	ATTAAA	-18	NA	43991844	43996528	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_43992005_43992152_43992388_43993889_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
H1_mix_00007912	chr1	+	1590	11	NIC	ENSG00000178028.14	novel	1552	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	120.131969100652	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGCTGCTTCCTTTTCCT	-15	True	NA	18	True	AATAGA	-15	NA	44213487	44220673	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_44213528_44213662_44213859_44214349_44214442_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
H1_mix_00007913	chr1	+	1642	3	NIC	ENSG00000187147.18	novel	3099	15	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	4.5	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTAAATCTACTTTTTTC	23	True	NA	NA	False	AATAAA	-23	NA	44405193	44419870	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_44405527_44411980_44412723_44419303
H1_mix_00007914	chr1	+	1203	9	FSM	ENSG00000187147.18	ENST00000335497.11	1203	9	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_1	127.833326542807	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAGTAGAAAAGAACCTAG	9055	False	NA	NA	False	NA	NA	NA	44631731	44649769	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_44632209_44632342_44632386_44635544_44635667_44636029_44636163_44644697_44644795_44644994_44645082_44645220_44645277_44645409_44645489_44649660
H1_mix_00007915	chr1	+	650	5	FSM	ENSG00000142937.12	ENST00000497035.5	694	5	44	0	44	0	multi-exon	FALSE	canonical	2	4	junction_1	5020.09558549436	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCTCCTGGAGGAGCAG	2650	False	NA	44	True	AAAAAG	-14	NA	44775294	44778087	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_44775474_44776033_44776141_44776674_44776775_44777613_44777790_44777999
H1_mix_00007916	chr1	+	230	1	FSM	ENSG00000281912.1	ENST00000626198.1	1710	1	17	1463	17	-1463	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGACTGGCGCGCCTACCCT	NA	False	NA	NA	False	NA	NA	NA	45303926	45304156	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_45303900_45304200
H1_mix_00007917	chr1	+	1644	8	NIC	ENSG00000132773.12	novel	1887	8	NA	NA	50	-151	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	28.4095413693415	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCACTGCATTGCCCTGGA	30	False	NA	NA	False	NA	NA	NA	45340270	45343813	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_45340323_45341072_45341216_45341302_45341344_45341472_45341570_45341948_45342108_45342383_45342644_45342842_45343003_45343081
H1_mix_00007918	chr1	+	874	10	FSM	ENSG00000132780.17	ENST00000437901.6	874	10	0	0	0	0	multi-exon	FALSE	canonical	1	16	junction_1	748.18438672777	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAACTCTCAGTATGATGA	NA	False	NA	NA	False	NA	NA	NA	45583845	45615131	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_45583913_45584107_45584206_45591222_45591271_45602254_45602366_45604935_45605017_45606481_45606592_45613168_45613249_45614095_45614182_45614292_45614367_45615012
H1_mix_00007920	chr1	+	339	3	NNC	ENSG00000159596.7	novel	1465	3	NA	NA	0	-541	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	124.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTTTCCTCATCATTTC	-6	True	NA	NA	False	NA	NA	NA	45688180	45693304	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_45688282_45690973_45691111_45693203
H1_mix_00007922	chr1	+	808	7	FSM	ENSG00000085999.13	ENST00000493985.5	810	7	2	0	2	0	multi-exon	FALSE	canonical	2	15	junction_1	115.057111422497	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACGGAGCCCTAACAAAGA	14	False	NA	NA	False	AATAGA	-12	NA	46247701	46261015	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_46247747_46248511_46248599_46249999_46250120_46258685_46258747_46259963_46260100_46260541_46260612_46260726
H1_mix_00007923	chr1	+	3867	6	FSM	ENSG00000117481.11	ENST00000498008.5	3867	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	23.007824755939	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTGGGGCTGCAGTTGG	606	False	NA	12	True	AATAAA	-17	NA	46341835	46362192	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_46344295_46344800_46345145_46346920_46347076_46352867_46353029_46360703_46360829_46361569
H1_mix_00007924	chr1	+	1876	15	NNC	ENSG00000117480.16	novel	1046	8	NA	NA	-516	0	at_least_one_novel_splicesite	FALSE	canonical	3	121	junction_1	92.9575281556923	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTCGTCTGTGTGGTTT	NA	False	NA	NA	False	AAGAAA	-3	NA	46393800	46413845	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_46393862_46402090_46402205_46405013_46405149_46405371_46405506_46405587_46405795_46406037_46406079_46406243_46406369_46408458_46408585_46409100_46409199_46410397_46410498_46410813_46410855_46411611_46411652_46412142_46412252_46413074_46413221_46413446
H1_mix_00007925	chr1	+	2123	15	NNC	ENSG00000117480.16	novel	2042	15	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	canonical	3	69	junction_2	99.7001627329644	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTCGTCTGTGTGGTTT	6	False	NA	NA	False	AAGAAA	-3	NA	46394271	46413845	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_46394544_46402090_46402241_46405013_46405149_46405371_46405506_46405587_46405795_46406037_46406079_46406243_46406369_46408458_46408585_46409100_46409199_46410397_46410498_46410813_46410855_46411611_46411652_46412142_46412252_46413074_46413221_46413446
H1_mix_00007927	chr1	+	1850	15	NIC	ENSG00000117480.16	novel	2042	15	NA	NA	81	-9	combination_of_known_junctions	FALSE	canonical	3	59	junction_13	105.788680386699	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAAACAGCTCCTCGTCT	135	False	NA	NA	False	NA	NA	NA	46394451	46413836	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_46394544_46402090_46402205_46405013_46405149_46405371_46405506_46405587_46405795_46406037_46406079_46406243_46406369_46408458_46408585_46409100_46409199_46410397_46410498_46410813_46410855_46411611_46411652_46412142_46412252_46413122_46413221_46413446
H1_mix_00007928	chr1	+	2669	1	FSM	ENSG00000279096.2	ENST00000640049.1	2669	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCTCTGACTGAGGGATG	NA	False	NA	NA	False	NA	NA	NA	48102067	48104736	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_48102100_48104700
H1_mix_00007930	chr1	+	4821	13	NNC	ENSG00000117834.13	novel	3162	14	NA	NA	-11411	0	intron_retention	FALSE	canonical	2	44	junction_1	20.2271819314725	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTTCTCCATGGTCCTGG	NA	False	NA	22	True	AATAAA	-16	NA	48211273	48248638	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_48212326_48222663_48222899_48224723_48224796_48228849_48229460_48230599_48230706_48231544_48231626_48231945_48232503_48233654_48233763_48235728_48235880_48237678_48237848_48239321_48239538_48242456_48242617_48247334
H1_mix_00007931	chr1	+	3563	16	NNC	ENSG00000117834.13	novel	3162	14	NA	NA	-10887	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	30.1628174339791	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTTCTCCATGGTCCTGG	NA	False	NA	22	True	AATAAA	-16	NA	48211797	48248638	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_48212109_48212209_48212326_48222663_48222899_48224723_48224796_48228849_48228955_48229294_48229460_48230599_48230706_48231544_48231626_48231945_48232074_48232366_48232503_48233654_48233763_48235728_48235880_48237678_48237848_48239321_48239538_48242456_48242617_48247334
H1_mix_00007933	chr1	+	1955	3	FSM	ENSG00000123080.12	ENST00000396148.2	2076	3	121	0	121	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACATTTTTCTGTGATTTT	-8	True	NA	17	True	ATTAAA	-18	NA	50968826	50974634	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_50969900_50970357_50970498_50973892
H1_mix_00007934	chr1	+	2835	20	NIC	ENSG00000117859.19	novel	2210	21	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_3	168.976288719999	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATCTTTTATTATCTT	-15	True	NA	20	True	CATAAA	-29	NA	51729832	51788469	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_51730125_51745535_51745632_51746709_51746758_51750144_51750196_51756319_51756359_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
H1_mix_00007936	chr1	+	782	3	FSM	ENSG00000134748.13	ENST00000487160.1	926	3	-53	197	-35	-197	multi-exon	FALSE	canonical	3	391	junction_2	28.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCCAGCCTGCCTCTGTC	3	True	NA	NA	False	NA	NA	NA	52404566	52408877	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_52404880_52405679_52405840_52408568
H1_mix_00007938	chr1	+	4340	14	FSM	ENSG00000203995.10	ENST00000371528.2	4445	14	105	0	105	0	multi-exon	FALSE	canonical	0	0	junction_3	2.22412804535399	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTTCAGTAAGGTGGTT	12	True	NA	NA	False	NA	NA	NA	52842864	52894998	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_52842974_52854464_52854631_52856997_52857750_52860730_52860872_52863980_52864158_52866502_52866568_52867538_52867639_52867726_52867778_52877681_52877844_52877924_52877970_52881470_52881666_52885832_52885895_52886955_52887054_52892781
H1_mix_00007940	chr1	+	1851	2	FSM	ENSG00000243725.7	ENST00000486091.1	1873	2	22	0	22	0	multi-exon	FALSE	canonical	3	292	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTAGCTGTGTGACTTC	NA	False	NA	14	True	NA	NA	NA	54736710	54742307	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_54737665_54741410
H1_mix_00007941	chr1	+	575	2	FSM	ENSG00000242396.2	ENST00000415336.1	575	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTCAGCAACCAGTGTAG	59	False	NA	NA	False	NA	NA	NA	54886874	54888001	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_54887136_54887687
H1_mix_00007942	chr1	+	390	2	FSM	ENSG00000223956.4	ENST00000635434.1	268	2	-122	0	3	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGTGAGTTAGGTTCG	1	True	NA	4	True	AATAAA	-18	NA	56414941	56415962	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_56415151_56415781
H1_mix_00007943	chr1	+	5250	37	ISM	ENSG00000132849.22	ENST00000642238.2	8621	44	-74	46522	-71	0	5prime_fragment	FALSE	canonical	3	59	junction_5	9.57862203033401	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCCCTAGATTTTTCTC	104	False	NA	16	True	AATAAA	-25	NA	61742405	62117393	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_61742556_61762857_61762915_61763012_61763180_61766278_61766474_61769282_61769423_61771430_61771627_61775205_61775335_61787753_61787973_61791347_61791448_61795466_61795559_61797286_61797429_61801622_61801770_61805447_61805525_61808473_61808531_61822944_61823080_61827421_61827584_61833653_61833786_61856029_61856240_61861550_61861668_61864237_61864634_61875242_61875367_61884236_61884409_61899582_61899655_61901281_61901460_61908371_61908483_61914586_61914665_61927729_61927830_61990167_61990365_62017855_62017948_62037976_62038050_62050965_62051059_62079449_62079568_62084514_62084649_62108436_62108521_62114052_62114247_62116531_62116680_62117131
H1_mix_00007944	chr1	+	5258	38	NIC	ENSG00000132849.22	novel	8505	43	NA	NA	12	2	combination_of_known_junctions	FALSE	canonical	3	9	junction_34	16.8723995642661	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTAGATTTTTCTCTCCT	27	True	NA	20	True	AATAAA	-29	NA	61742491	62117397	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_61742556_61762857_61762915_61763012_61763180_61766278_61766474_61769282_61769423_61771430_61771627_61775205_61775335_61787753_61787973_61791347_61791448_61795466_61795559_61797286_61797429_61801622_61801770_61805447_61805525_61808473_61808531_61822944_61823080_61827421_61827584_61833653_61833786_61856029_61856240_61861550_61861668_61864237_61864634_61875242_61875367_61884236_61884409_61899582_61899655_61901281_61901460_61908371_61908483_61914586_61914665_61927729_61927830_61990167_61990365_62017855_62017948_62037976_62038050_62050965_62051059_62079449_62079568_62084514_62084649_62100318_62100409_62108436_62108521_62114052_62114247_62116531_62116680_62117131
H1_mix_00007945	chr1	+	1824	11	ISM	ENSG00000132849.22	ENST00000646453.1	5234	18	-71	46558	-71	-1	5prime_fragment	FALSE	canonical	3	6	junction_1	24.5242736895509	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAATCCCTAGATTTTTCT	NA	False	NA	15	True	AATAAA	-24	NA	61951981	62117392	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_61952412_61990167_61990365_62017855_62017948_62037976_62038050_62050965_62051059_62079449_62079568_62084514_62084649_62108436_62108521_62114052_62114247_62116531_62116680_62117131
H1_mix_00007946	chr1	+	5013	2	Intergenic	novelGene_46	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	4	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TATCTCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62224541	62229690	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_62228329_62228464
H1_mix_00007948	chr1	+	1821	15	FSM	ENSG00000088035.18	ENST00000647818.1	1841	15	20	0	-8	0	multi-exon	FALSE	canonical	0	0	junction_7	83.0092507753546	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCATGGAACCACAGGAAAG	NA	False	NA	-68	True	TATAAA	-20	NA	63367594	63437126	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_63367688_63370770_63371060_63396512_63396598_63402253_63402344_63404452_63404542_63406316_63406400_63407061_63407127_63411254_63411332_63411925_63412062_63414060_63414147_63415872_63415958_63419369_63419441_63428732_63428802_63428927_63429127_63436822
H1_mix_00007949	chr1	+	360	1	FSM	ENSG00000244256.3	ENST00000489463.3	305	1	-200	145	-200	-145	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAACCACCAGGTTGCATAA	4138	False	NA	NA	False	NA	NA	NA	63655542	63655902	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_63655500_63655900
H1_mix_00007950	chr1	+	5629	8	NIC	ENSG00000185483.13	novel	5858	9	NA	NA	136	-16	combination_of_known_splicesites	FALSE	canonical	3	61	junction_1	371.504168131093	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTTTACTATAAAATATT	82	False	NA	-1	True	ATTAAA	-32	NA	63774157	64181482	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_63774509_64049690_64049979_64050685_64050717_64137368_64137497_64140108_64140427_64142404_64142651_64158980_64159193_64177427
H1_mix_00007952	chr1	+	5242	20	NNC	ENSG00000116678.20	novel	2805	18	NA	NA	-1399	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	9.48245208302817	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTTGTGTATTTGTCT	NA	False	NA	12	True	TATAAA	-15	NA	65564146	65635428	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_65564320_65564707_65564807_65565545_65565606_65570472_65570803_65572325_65572450_65592656_65592866_65596447_65596594_65598659_65598805_65601391_65601683_65601842_65601961_65605037_65605238_65608752_65608902_65609946_65610107_65610213_65610297_65616007_65616225_65617963_65618147_65619927_65620024_65621352_65621459_65622905_65622982_65633151
H1_mix_00007953	chr1	+	266	3	FSM	ENSG00000116678.20	ENST00000471762.1	669	3	0	403	0	-403	multi-exon	FALSE	canonical	3	18	junction_2	11.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTTTTCAATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	65619939	65622981	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_65620024_65621352_65621459_65622905
H1_mix_00007954	chr1	+	407	2	FSM	ENSG00000184588.18	ENST00000483863.2	572	2	73	92	73	-92	multi-exon	FALSE	canonical	3	50	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTGAGGAAAGTCTTTG	NA	False	NA	NA	False	NA	NA	NA	66367566	66368065	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_66367851_66367942
H1_mix_00007955	chr1	+	8050	21	FSM	ENSG00000118473.23	ENST00000683257.1	8056	21	6	0	-5	0	multi-exon	FALSE	canonical	0	0	junction_13	1.98683164863055	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGGAATGCTTTGAAAAAA	2	True	NA	NA	False	AATAAA	-5	NA	66534090	66748987	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_66534369_66625846_66625911_66633069_66633095_66639776_66639834_66642809_66642865_66643543_66643720_66670994_66671020_66671943_66671996_66673280_66673367_66677003_66677097_66679677_66679753_66689147_66689276_66690189_66690317_66695433_66695494_66719293_66719406_66729263_66729420_66733747_66733881_66739334_66739538_66740657_66740723_66741271_66741437_66743072
H1_mix_00007956	chr1	+	593	3	FSM	ENSG00000152760.10	ENST00000525663.5	758	3	0	165	0	-165	multi-exon	FALSE	canonical	3	10	junction_2	3	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTACTGACTTAACAAATTC	0	True	NA	NA	False	NA	NA	NA	66752458	66770731	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_66752585_66754655_66754778_66770386
H1_mix_00007957	chr1	+	3595	14	FSM	ENSG00000198160.15	ENST00000355977.10	3595	14	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	40.3160590259591	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTGAGTAAGAAGTAATTT	NA	False	NA	NA	False	ATTAAA	-17	NA	66924894	66988619	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_66925096_66926141_66926243_66940027_66940053_66958058_66958221_66958850_66958984_66959678_66959744_66963087_66963161_66970807_66970960_66971654_66971737_66972896_66972992_66976594_66976723_66981778_66981919_66984571_66984593_66986402
H1_mix_00007958	chr1	+	4911	14	NNC	ENSG00000198160.15	novel	4818	13	NA	NA	-59	6864	intron_retention	FALSE	non_canonical	0	0	junction_13	35.0538047973288	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCAAAACCTCTGTCTTC	3	True	NA	NA	False	NA	NA	NA	66930183	66995483	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_66930401_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087_66963161_66970807_66970960_66971654_66971737_66972896_66972992_66976594_66976723_66981778_66981919_66984571_66988028_66995446
H1_mix_00007960	chr1	+	2725	13	NIC	ENSG00000116754.14	novel	3784	13	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	93	junction_1	337.908764806913	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCATGTTCCTGTAAAAC	16	True	NA	13	True	AATAAA	-14	NA	70205728	70252001	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_70205781_70221611_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364_70250504_70250610
H1_mix_00007961	chr1	+	2922	13	NIC	ENSG00000116754.14	novel	2385	13	NA	NA	0	0	intron_retention	TRUE	canonical	3	31	junction_9	436.127625306579	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCATGTTCCTGTAAAAC	27	False	NA	13	True	AATAAA	-14	NA	70221395	70252001	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70247116_70247150_70249951_70250048_70250364_70250504_70250610
H1_mix_00007966	chr1	+	3520	11	ISM	ENSG00000116754.14	ENST00000395136.7	1717	12	7026	-2247	0	0	3prime_fragment	FALSE	canonical	3	44	junction_8	352.611982212743	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTCCTTATTTATTT	6304	False	NA	20	True	AATAAA	-21	NA	70228421	70253052	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249930_70250048_70250364_70250504_70250607
H1_mix_00007968	chr1	+	3034	10	FSM	ENSG00000116754.14	ENST00000690370.1	3034	10	0	0	0	0	multi-exon	FALSE	canonical	3	805	junction_9	132.714396774092	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCATGTTCCTGTAAAAC	834	False	NA	13	True	AATAAA	-14	NA	70231547	70252001	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364_70250504_70250607
H1_mix_00007969	chr1	+	1439	5	FSM	ENSG00000254685.8	ENST00000534056.5	1426	5	-13	0	10	0	multi-exon	FALSE	canonical	2	2	junction_4	28.7967011999639	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATAAAAATGGCATACT	-11	True	NA	NA	False	NA	NA	NA	74198253	74206223	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_74198361_74199663_74199832_74201317_74201411_74204390_74204457_74205218
H1_mix_00007971	chr1	+	2355	11	FSM	ENSG00000117054.15	ENST00000679976.1	2355	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	190.207912558863	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAAAGTTACCTGTTCA	0	True	NA	-66	True	AAAAAG	-19	NA	75724430	75763596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_75724818_75728400_75728489_75732643_75732742_75732852_75732923_75734790_75734872_75739979_75740111_75745805_75745915_75749418_75749560_75750450_75750547_75761121_75761371_75762691
H1_mix_00007972	chr1	+	2549	13	FSM	ENSG00000117054.15	ENST00000680613.1	2549	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	272.452697219576	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAAAGTTACCTGTTCA	0	True	NA	-66	True	AAAAAG	-19	NA	75724430	75763596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_75724818_75728400_75728489_75732643_75732742_75732852_75732923_75733527_75733629_75734790_75734872_75739979_75740111_75745834_75745915_75749418_75749560_75750450_75750547_75750769_75750892_75761121_75761371_75762691
H1_mix_00007973	chr1	+	2359	11	FSM	ENSG00000117054.15	ENST00000680691.1	2359	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	248.058239129443	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAAAGTTACCTGTTCA	0	True	NA	-66	True	AAAAAG	-19	NA	75724430	75763596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_75724818_75728400_75728489_75732643_75732746_75732852_75732923_75734790_75734872_75739979_75740111_75745805_75745915_75749418_75749560_75750450_75750547_75761121_75761371_75762691
H1_mix_00007974	chr1	+	2086	12	NIC	ENSG00000117054.15	novel	2261	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	22	junction_6	183.986210406744	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTATTATCATATCTTTCT	-34	True	NA	21	True	AATAAA	-11	NA	75724688	75763486	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_75724818_75728400_75728489_75732643_75732742_75732852_75732923_75733527_75733629_75734790_75734870_75739979_75740111_75745805_75745915_75749418_75749560_75750450_75750547_75761121_75761371_75762691
H1_mix_00007975	chr1	+	1595	9	NIC	ENSG00000137955.16	novel	2137	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	181.123533465422	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATAGGTTTGAATATGGT	11	False	NA	27	True	AATAAA	-24	NA	75786699	75795086	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_75786866_75787496_75787605_75789158_75789357_75789951_75790058_75791284_75791338_75791460_75791572_75792180_75792307_75794083_75794234_75794509
H1_mix_00007977	chr1	+	771	3	FSM	ENSG00000184005.11	ENST00000464140.1	861	3	0	90	0	-90	multi-exon	FALSE	canonical	0	0	junction_2	85.5	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTATGTAAATATTTTTAAA	NA	False	NA	-84	True	AAAAAG	-21	NA	76313912	76577119	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_76314000_76412007_76412418_76576845
H1_mix_00007979	chr1	+	1249	1	FSM	ENSG00000226415.1	ENST00000420977.1	750	1	-32	-467	-32	467	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAGCTATTGTACAACA	5	False	NA	NA	False	AATAAA	-38	NA	76699756	76701005	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_76699800_76701000
H1_mix_00007980	chr1	+	1773	3	ISM	ENSG00000117069.15	ENST00000318803.6	2055	5	-21	18560	-21	-4818	5prime_fragment	FALSE	canonical	3	25	junction_2	11	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAAAACTGTGTCTGTGT	15	False	NA	NA	False	AATAAA	-31	NA	76867458	77045498	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_76867691_76868496_76868743_77044203
H1_mix_00007981	chr1	+	1231	1	FSM	ENSG00000226084.5	ENST00000471722.1	555	1	-36	-640	-36	640	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	5	True	NA	NA	False	NA	NA	NA	77129077	77130308	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_77129100_77130300
H1_mix_00007984	chr1	+	6361	16	NIC	ENSG00000180488.16	novel	6409	16	NA	NA	19	0	intron_retention	FALSE	canonical	2	3	junction_1	10.0589374300779	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCTTGCTGATGTATTGAA	25	False	NA	3	True	AATAAA	-13	NA	77779667	77879540	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_77779737_77783242_77783352_77801330_77801509_77803269_77803407_77806974_77807102_77813733_77813868_77815107_77815232_77843306_77843408_77858937_77859057_77859313_77859387_77860039_77860127_77861223_77861323_77863893_77864029_77866337_77866392_77873000_77873121_77874845
H1_mix_00007987	chr1	+	364	1	Intergenic	novelGene_72	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCGCGGGAGCAGGCGGC	2947	False	NA	NA	False	NA	NA	NA	81504535	81504899	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_81504500_81504900
H1_mix_00007988	chr1	+	320	1	Intergenic	novelGene_73	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGAGGGATGCCAGCAGG	3642	False	NA	NA	False	NA	NA	NA	81505230	81505550	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_81505200_81505600
H1_mix_00007990	chr1	+	6495	21	NNC	ENSG00000117114.21	novel	4278	20	NA	NA	455	0	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_19	139.661904254525	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAACATGTGAACTTTTA	0	True	NA	8	True	AATAAA	-18	NA	81801452	81992422	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_81802230_81836884_81837058_81907016_81907231_81936727_81936838_81942968_81943770_81950188_81950483_81951017_81951122_81951956_81952143_81955876_81956061_81966057_81966184_81966403_81966610_81968025_81968200_81969177_81969388_81970313_81970535_81971851_81971919_81979868_81979961_81981807_81981977_81984582_81984712_81985258_81985356_81986900_81987030_81990390
H1_mix_00007991	chr1	+	5732	21	NNC	ENSG00000117114.21	novel	4278	20	NA	NA	523	0	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_8	137.345221977323	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAATTGTCATTAAAATAA	23	False	NA	-23	True	AATAAA	-22	NA	81801520	81991817	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_81802230_81836884_81837058_81907016_81907231_81936727_81936838_81942968_81943770_81950188_81950483_81951017_81951122_81951956_81952143_81952986_81953026_81955876_81956061_81966057_81966184_81966403_81966610_81968025_81968200_81969177_81969388_81970313_81970535_81971851_81971919_81979868_81979961_81981807_81981977_81984582_81984712_81985258_81985356_81990390
H1_mix_00007992	chr1	+	544	3	FSM	ENSG00000117133.11	ENST00000370656.5	724	3	-8	188	-8	-188	multi-exon	FALSE	canonical	3	333	junction_1	28.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGACTATTTCATAATTG	-13	True	NA	NA	False	NA	NA	NA	84479250	84483142	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_84479510_84480955_84481013_84482914
H1_mix_00007993	chr1	+	450	2	FSM	ENSG00000122432.18	ENST00000484939.1	563	2	52	61	-30	-61	multi-exon	FALSE	canonical	2	2	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTTATTAGGGAAGCAT	7882	False	NA	NA	False	NA	NA	NA	84506351	84507259	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_84506419_84506876
H1_mix_00007994	chr1	+	249	1	FSM	ENSG00000223254.1	ENST00000411322.1	107	1	-227	85	-227	-85	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTCAATTGATTGTTCAG	NA	False	NA	NA	False	NA	NA	NA	85264068	85264317	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_85264100_85264300
H1_mix_00007995	chr1	+	2893	14	FSM	ENSG00000016490.16	ENST00000394711.2	3004	14	97	14	97	-14	multi-exon	FALSE	canonical	0	0	junction_1	0.737820234355803	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACAACTGGGTATACATG	95	False	NA	NA	False	AATAAA	-5	NA	86469023	86500245	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_86469134_86473416_86473558_86473728_86473877_86476447_86476554_86482204_86482383_86485342_86485562_86486525_86486754_86488995_86489171_86491264_86491372_86493383_86493600_86494186_86494449_86495504_86495676_86498571_86498812_86499653
H1_mix_00007998	chr1	+	952	4	FSM	ENSG00000143013.13	ENST00000489303.1	952	4	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	4.96655480858378	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGACTGTAGAGAAAATGAAA	52	False	NA	37	True	NA	NA	NA	87331780	87345015	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_87332252_87339535_87339633_87340046_87340203_87344787
H1_mix_00007999	chr1	+	5590	21	NIC	ENSG00000065243.20	novel	6070	22	NA	NA	20	-333	combination_of_known_splicesites	FALSE	canonical	1	4	junction_11	38.4635866762318	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTGTCCTAGTGAAGGC	21	True	NA	11	True	AATAAA	-15	NA	88684292	88835922	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_88684629_88740987_88741289_88760221_88760377_88770351_88770470_88771420_88771567_88771662_88771880_88784638_88784825_88786103_88786214_88804390_88804535_88804845_88804922_88805496_88805672_88807312_88807444_88807528_88807605_88807683_88807776_88813556_88813734_88821940_88822004_88824309_88824387_88828480_88828624_88832743_88832852_88833076_88833158_88833244
H1_mix_00008001	chr1	+	3001	1	FSM	ENSG00000235308.1	ENST00000450381.1	475	1	-2326	-200	-2326	200	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGCAGCCACCCAGATC	NA	False	NA	NA	False	NA	NA	NA	88921043	88924044	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_88921000_88924000
H1_mix_00008002	chr1	+	6512	6	NNC	ENSG00000197147.15	novel	3225	7	NA	NA	-571	-1275	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_1	51.7663983680534	30	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGCCCTTAACATTAT	NA	False	NA	11	True	ATTAAA	-16	NA	89524257	89596573	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_89524588_89568246_89568308_89568438_89568494_89579590_89579689_89582624_89584790_89592770
H1_mix_00008003	chr1	+	9433	12	FSM	ENSG00000162664.17	ENST00000370447.3	9433	12	0	0	0	0	multi-exon	TRUE	canonical	3	6	junction_4	70.8999994171747	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTGTTCCTGTCTGAAA	-8	True	NA	7	True	AATAAA	-14	NA	89995136	90035531	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_89995274_89998109_89998155_90005002_90005039_90005132_90005245_90007611_90007751_90010087_90010287_90013125_90013238_90017316_90017465_90018684_90018785_90020791_90020923_90022249_90022346_90027353
H1_mix_00008005	chr1	+	1807	1	FSM	ENSG00000203914.4	ENST00000415545.2	1567	1	37	-277	37	277	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCGTGAAATCGCAAGGGG	NA	False	NA	NA	False	TATAAA	-32	NA	91642552	91644359	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_91642600_91644400
H1_mix_00008006	chr1	+	1376	7	FSM	ENSG00000172031.7	ENST00000370383.5	1436	7	0	60	0	-60	multi-exon	FALSE	canonical	1	2	junction_2	2.73353657780945	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTATTTTGCACAGACA	-25	True	NA	NA	False	AATACA	-16	NA	92029984	92063478	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_92030311_92032504_92032591_92042822_92042981_92045531_92045661_92050316_92050421_92052509_92052659_92063054
H1_mix_00008007	chr1	+	4272	7	FSM	ENSG00000189195.15	ENST00000637221.2	4272	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	2.51661147842358	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGTAGAGTTTTCTGTG	-3	True	NA	5	True	AATAAA	-22	NA	92168922	92184723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_92168996_92171398_92171461_92176828_92177547_92177810_92177899_92178311_92178452_92180264_92182596_92183863
H1_mix_00008009	chr1	+	1210	3	FSM	ENSG00000122406.14	ENST00000497519.1	1210	3	0	0	0	0	multi-exon	FALSE	canonical	3	5357	junction_1	753.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACCCAGCAATTTTCTAT	398	False	NA	12	True	NA	NA	NA	92836609	92841862	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_92837634_92840550_92840640_92841765
H1_mix_00008011	chr1	+	553	3	FSM	ENSG00000122483.18	ENST00000528942.1	542	3	-11	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	3	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAACTTAGGCAACAGA	-17	True	NA	NA	False	ATTAAA	-18	NA	93179918	93186400	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_93180280_93183359_93183496_93186344
H1_mix_00008012	chr1	+	4867	29	FSM	ENSG00000122483.18	ENST00000343253.11	4867	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	25.0078559085512	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAAAGAAGATACTGATGT	-17	True	NA	NA	False	NA	NA	NA	93179918	93278477	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_93180419_93183359_93183496_93183977_93184147_93186344_93186504_93191999_93192107_93193615_93193745_93201891_93201989_93205509_93205632_93207106_93207399_93210801_93210927_93212100_93212262_93214745_93214967_93216635_93216747_93217737_93217870_93221608_93221744_93221858_93221937_93226332_93226450_93232425_93232594_93236247_93236391_93239309_93239474_93239682_93239897_93246104_93246205_93246837_93246955_93254470_93254615_93256334_93256539_93258747_93258886_93264700_93264902_93270346_93270815_93278462
H1_mix_00008014	chr1	+	4128	28	NIC	ENSG00000122483.18	novel	4752	29	NA	NA	-1	-28	combination_of_known_junctions	FALSE	canonical	3	37	junction_27	16.3214452411527	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTTTGAATAAATTTTAT	11	True	NA	NA	False	NA	NA	NA	93180722	93278573	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_93180853_93183359_93183496_93183977_93184147_93186344_93186504_93191999_93192107_93193615_93193745_93201891_93201989_93205509_93205632_93207106_93207399_93210801_93210927_93212100_93212262_93214742_93214967_93216635_93216747_93217737_93217870_93221608_93221744_93221858_93221937_93226332_93226450_93232425_93232594_93236247_93236391_93239309_93239474_93239682_93239897_93246104_93246205_93246837_93246955_93254470_93254615_93256334_93256539_93258747_93258886_93264700_93264902_93278462
H1_mix_00008018	chr1	+	1334	3	FSM	ENSG00000235501.7	ENST00000657603.1	1334	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	13	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCTATGAAGAAACATATT	77	False	NA	-38	True	NA	NA	NA	94927477	94963219	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_94928403_94931871_94931986_94962924
H1_mix_00008020	chr1	+	425	2	NNC	ENSG00000122481.17	novel	1180	4	NA	NA	0	5579	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	0	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATTGATGTCTCATGGTC	1	True	NA	22	True	AATAAA	-34	NA	95234209	95252804	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_95234316_95252485
H1_mix_00008021	chr1	+	1466	7	NIC	ENSG00000162627.17	novel	1736	9	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_2	175.086327913467	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTGGCTGCAGTGTATT	-7	True	NA	13	True	AATAAA	-15	NA	98661714	98760500	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_98661912_98684884_98685068_98695517_98695717_98698705_98698906_98701816_98701904_98738236_98738390_98760053
H1_mix_00008022	chr1	+	259	2	Antisense	novelGene_ENSG00000224445.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCCAATCACCTCAGAAGC	NA	False	NA	NA	False	NA	NA	NA	99509884	99512100	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr1_+_99510112_99512068
H1_mix_00008023	chr1	+	793	1	NIC	ENSG00000162688.17	novel	7179	34	NA	NA	-107	-23242	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTACTCCCATCAGATTCCT	1587	False	NA	NA	False	NA	NA	NA	99852562	99853355	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_99852600_99853400
H1_mix_00008024	chr1	+	2465	7	FSM	ENSG00000117620.15	ENST00000640178.1	2446	7	-19	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	25.9449202906636	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGCAGTAAGTGGAGATCA	-11	True	NA	NA	False	NA	NA	NA	99970004	100023942	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_99970163_99993536_99993742_100007033_100007157_100011364_100011534_100015301_100015421_100017681_100017816_100022385
H1_mix_00008026	chr1	+	3082	11	NIC	ENSG00000122435.11	novel	3128	11	NA	NA	4	2	intron_retention	FALSE	canonical	2	18	junction_5	14.4	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTCATTTATGTTTGAT	13	True	NA	12	True	AATAAA	-20	NA	100133168	100150498	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_100133316_100136881_100136929_100137018_100137086_100139648_100139712_100140181_100140252_100140449_100140515_100140851_100141020_100143136_100143210_100144068_100144144_100147893_100148327_100148624
H1_mix_00008028	chr1	+	219	1	FSM	ENSG00000230287.3	ENST00000435545.1	222	1	44	-41	44	41	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTCCTCTACACACTGT	NA	False	NA	NA	False	NA	NA	NA	100249133	100249352	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_100249100_100249400
H1_mix_00008029	chr1	+	1562	11	NIC	ENSG00000137996.13	novel	2526	11	NA	NA	1	-10	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	67.5322885736889	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACACCTGAAGTAAATACA	23	True	NA	NA	False	AATAAA	-8	NA	100266249	100291761	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_100266421_100266523_100266625_100268073_100268296_100270556_100270681_100273393_100273453_100274823_100274966_100275598_100275724_100277257_100277317_100285227_100285323_100287098_100287204_100291402
H1_mix_00008030	chr1	+	1752	11	FSM	ENSG00000079335.20	ENST00000370124.8	1873	11	0	121	0	-26	multi-exon	FALSE	canonical	3	40	junction_2	8.17863069223694	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCAATTGCCCTTAAAAAA	17	True	NA	NA	False	NA	NA	NA	100352501	100484613	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_100353004_100353761_100353853_100377545_100377622_100390731_100390825_100424221_100424302_100439931_100439999_100442933_100442997_100455404_100455493_100462650_100462882_100467955_100468095_100484291
H1_mix_00008032	chr1	+	3775	16	NIC	ENSG00000185946.16	novel	3641	16	NA	NA	-2	0	intron_retention	FALSE	canonical	1	2	junction_1	25.18941576668	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTTTGTATTTTTTCTT	14	False	NA	NA	False	AATAAA	-21	NA	103525688	103555239	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_103525931_103526066_103526263_103527694_103527743_103533738_103533858_103534773_103534858_103535329_103535442_103536125_103536195_103537341_103537485_103541349_103541476_103543298_103543448_103544940_103545103_103546247_103546343_103546976_103547036_103550940_103551074_103551720_103551793_103553273
H1_mix_00008033	chr1	+	1585	11	FSM	ENSG00000162636.16	ENST00000405454.1	1585	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_10	35.3015580392707	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAATTAGCTGAGACCTG	20	True	NA	NA	False	AATAAA	-4	NA	108560088	108644900	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_108560566_108600565_108600687_108606222_108606253_108612177_108612295_108616381_108616429_108624644_108624749_108628166_108628263_108628394_108628585_108628676_108628805_108629587_108629658_108644695
H1_mix_00008034	chr1	+	2487	19	NNC	ENSG00000116266.11	novel	2489	19	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	2	88	junction_9	68.9128990416234	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTCTGGTTTGTGTTTTC	-4	True	NA	6	True	AATAAA	-17	NA	108746679	108809523	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_108746787_108752256_108752307_108753062_108753145_108756689_108756767_108758509_108758589_108759984_108760086_108772664_108772820_108776332_108776424_108779285_108779415_108782421_108782518_108782648_108782707_108793581_108793648_108794826_108794908_108796233_108796373_108796619_108796727_108798144_108798238_108800219_108800306_108807400_108807550_108808782
H1_mix_00008035	chr1	+	420	1	FSM	ENSG00000278249.1	ENST00000458748.1	420	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGGCCACCGGGCTGCGG	-2	True	NA	NA	False	NA	NA	NA	109100192	109100612	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_109100200_109100600
H1_mix_00008036	chr1	+	5034	3	FSM	ENSG00000174151.15	ENST00000420578.7	4912	3	-124	2	-82	0	multi-exon	FALSE	canonical	1	2	junction_1	4.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATTATGTTCTTGTCCT	10015	False	NA	21	True	ATTAAA	-18	NA	109493969	109500433	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_109494288_109495142_109495181_109495755
H1_mix_00008038	chr1	+	709	5	FSM	ENSG00000213366.13	ENST00000464206.5	709	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	43.412987688018	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAATACACTTCCACAGC	-22	True	NA	NA	False	NA	NA	NA	109668053	109670023	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_109668152_109668424_109668501_109668924_109668990_109669289_109669372_109669635
H1_mix_00008039	chr1	+	1958	9	FSM	ENSG00000184371.14	ENST00000369802.7	2484	9	-8	534	-8	-534	multi-exon	FALSE	canonical	1	1	junction_8	2.95803989154981	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATTTGTGCAGATTAAGA	42	False	NA	NA	False	NA	NA	NA	109910890	109926209	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_109911063_109914258_109914382_109915633_109915697_109917292_109917464_109921846_109921995_109923165_109924191_109924775_109924829_109925146_109925203_109926062
H1_mix_00008042	chr1	+	1555	9	FSM	ENSG00000143119.14	ENST00000648608.1	1569	9	14	0	14	0	multi-exon	FALSE	canonical	0	0	junction_7	2.11763429326218	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACAACATTGCTATATATC	7	True	NA	17	True	AATAAA	-20	NA	110871201	110899922	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_110871260_110873155_110873249_110891391_110891472_110892344_110892534_110894326_110894402_110894959_110895056_110896652_110896734_110897808_110897893_110899123
H1_mix_00008043	chr1	+	2187	9	FSM	ENSG00000134255.15	ENST00000545121.5	2251	9	64	0	36	0	multi-exon	FALSE	canonical	1	12	junction_1	40.7760652834478	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTGTGATGTGTCTTG	218	False	NA	9	True	AATAAA	-21	NA	111139690	111185102	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_111139762_111147641_111148054_111159379_111159528_111161154_111161297_111174878_111174964_111182186_111182319_111182798_111182958_111183461_111183588_111184190
H1_mix_00008044	chr1	+	2175	9	NIC	ENSG00000134255.15	novel	5300	4	NA	NA	122	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_1	29.7069015550259	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTGTGATGTGTCTTG	3	True	NA	9	True	AATAAA	-21	NA	111139855	111185102	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_111139915_111147641_111148054_111159379_111159528_111161154_111161297_111174878_111174964_111182186_111182319_111182798_111182958_111183461_111183588_111184190
H1_mix_00008046	chr1	+	3818	9	FSM	ENSG00000064703.13	ENST00000681747.1	3818	9	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_6	29.7633898439005	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAATAGATTTGATTAGTA	70	False	NA	-10	True	AATAAA	-1	NA	111756032	111767242	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_111756226_111756645_111756741_111759399_111759569_111760473_111760589_111760705_111761126_111761225_111762338_111762676_111762783_111762905_111763008_111765736
H1_mix_00008047	chr1	+	10359	5	FSM	ENSG00000134245.18	ENST00000369684.5	11130	5	0	771	0	-771	multi-exon	FALSE	canonical	1	1	junction_3	1.08972473588517	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGACAGCACTATGAATTC	-1	True	NA	NA	False	AAGAAA	-23	NA	112508964	112529394	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_112509445_112514873_112515095_112516139_112516418_112517120_112517386_112520279
H1_mix_00008048	chr1	+	1270	6	FSM	ENSG00000184599.14	ENST00000361886.4	1451	6	181	0	181	0	multi-exon	FALSE	canonical	1	1	junction_4	1.01980390271856	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGGCACAGGTATGGGC	121	False	NA	4	True	AATAAA	-19	NA	112719085	112727235	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_112719300_112720576_112720635_112722232_112722349_112723015_112723166_112724012_112724138_112726628
H1_mix_00008049	chr1	+	3325	1	Intergenic	novelGene_87	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACCCAGTGTCTGAGGAG	NA	False	NA	9	True	AATAAA	-14	NA	112829353	112832678	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_112829400_112832700
H1_mix_00008051	chr1	+	434	1	FSM	ENSG00000236887.1	ENST00000412567.1	434	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGGCTCAGCTAATAAAG	19	False	NA	NA	False	NA	NA	NA	113198824	113199258	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_113198800_113199300
H1_mix_00008052	chr1	+	359	2	Genic_Genomic	ENSG00000232499.2	novel	1029	1	NA	NA	388	69	multi-exon	FALSE	non_canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTACTTTGAGACAGTCC	418	False	NA	NA	False	NA	NA	NA	113450087	113450797	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_+_113450313_113450663
H1_mix_00008054	chr1	+	5150	15	NNC	ENSG00000163393.13	novel	4705	12	NA	NA	-206	-129	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	5.78395034839106	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCCATACAAATGCTTTA	NA	False	NA	NA	False	ATTAAA	-21	NA	115976306	116069925	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_115976715_115992030_115992244_116019581_116019715_116020720_116020886_116026892_116027023_116031365_116031582_116031711_116031812_116032646_116032801_116033757_116033872_116035186_116035328_116037302_116037389_116062761_116062883_116064435_116064509_116066519_116066709_116067018
H1_mix_00008055	chr1	+	3763	23	FSM	ENSG00000163399.16	ENST00000537345.5	3763	23	0	0	0	0	multi-exon	FALSE	canonical	2	36	junction_1	565.313085199273	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGTCTGTGCCCTCGTC	55	False	NA	13	True	AATAAA	-18	NA	116373866	116404772	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_116374242_116384013_116384125_116384782_116384843_116387287_116387492_116388130_116388245_116388637_116388773_116388901_116389020_116389438_116389708_116390212_116390412_116390781_116390892_116392853_116392989_116393530_116393724_116395109_116395286_116396597_116396735_116397887_116398039_116398620_116398790_116398929_116399085_116399419_116399544_116400860_116401007_116401129_116401261_116401553_116401656_116403883_116403976_116404415
H1_mix_00008056	chr1	+	5845	4	FSM	ENSG00000231365.7	ENST00000670000.1	5847	4	160	-158	-12	158	multi-exon	FALSE	canonical	0	0	junction_3	5.43650214343336	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTATTTTTTTGTCATGA	186	False	NA	NA	False	AATAAA	-22	NA	119140695	119184091	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_119140794_119146952_119147070_119150564_119150747_119178643
H1_mix_00008057	chr1	+	1184	3	FSM	ENSG00000232650.6	ENST00000420059.6	1219	3	27	8	27	-8	multi-exon	FALSE	canonical	2	2	junction_2	0.5	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATGAGAAGGTCAGTCC	NA	False	NA	NA	False	ATTAAA	-18	NA	119327425	119330807	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_119328288_119328743_119328790_119330531
H1_mix_00008058	chr1	+	1783	11	FSM	ENSG00000092621.13	ENST00000641074.1	1780	11	-2	-1	0	0	multi-exon	TRUE	canonical	0	0	junction_9	723.042626682549	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTCTGCACTTTTGT	NA	False	NA	13	True	AATAAA	-13	NA	119711883	119744213	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_119712161_119721169_119721322_119723375_119723442_119726850_119726906_119727003_119727103_119734633_119734767_119735294_119735444_119737113_119737267_119740385_119740519_119742806_119743045_119743885
H1_mix_00008060	chr1	+	433	1	FSM	ENSG00000227205.4	ENST00000475753.2	433	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTTTGTTCCTTCCCCT	NA	False	NA	NA	False	AAGAAA	-43	NA	119853315	119853748	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_119853300_119853700
H1_mix_00008061	chr1	+	5465	26	NNC	ENSG00000270231.4	novel	5859	29	NA	NA	-4734	107	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	18.8340117871897	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTGTAATCTCTTCC	NA	False	NA	6	True	AATAAA	-18	NA	120415115	120467846	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_120415305_120417174_120417293_120419849_120420119_120425746_120425846_120427705_120427848_120436231_120436391_120436487_120436698_120444896_120445000_120445828_120446044_120447093_120447167_120447629_120447842_120449192_120449403_120451179_120451283_120452116_120452332_120453371_120453445_120453908_120454115_120455408_120455461_120459366_120459531_120460572_120460625_120461253_120461427_120462145_120462198_120462793_120462967_120463675_120463728_120464375_120464549_120465262_120465372_120465977
H1_mix_00008064	chr1	+	624	3	NIC	ENSG00000226067.7	novel	692	3	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	17.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATTGGTTCTATTATTT	26	False	NA	NA	False	AATAAA	-28	NA	120913254	120953460	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_120913451_120952438_120952626_120953219
H1_mix_00008065	chr1	+	1477	7	FSM	ENSG00000171943.12	ENST00000304465.7	1477	7	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	116.943006061357	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACCATCCCTACACTTAA	2063	False	NA	NA	False	NA	NA	NA	121187101	121387966	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_121187514_121365292_121365356_121373970_121374187_121374825_121374955_121382703_121382926_121386505_121386608_121387633
H1_mix_00008066	chr1	+	705	2	FSM	ENSG00000270872.2_ENSG00000289318.1	ENST00000685922.1	631	2	3	-77	3	77	multi-exon	FALSE	canonical	3	102	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGGGTTTTGAAAAATAG	10	True	NA	NA	False	AAAAAG	-41	NA	143972671	143975153	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_143972767_143974543
H1_mix_00008067	chr1	+	275	2	ISM	ENSG00000270872.2	ENST00000605551.2	1021	7	70660	13701	70660	-13701	internal_fragment	FALSE	canonical	3	54	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGTATGTAGGCTCCCAC	NA	False	NA	NA	False	NA	NA	NA	144045746	144054649	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_144045810_144054437
H1_mix_00008068	chr1	+	5690	4	ISM	ENSG00000270872.2	ENST00000605551.2	1021	7	80208	-5017	80208	5017	3prime_fragment	FALSE	canonical	3	75	junction_1	39.5979797464467	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATGACAAAGAACAGAAATT	NA	False	NA	NA	False	AATAAA	-16	NA	144055294	144073367	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_144055422_144063172_144063395_144067000_144067103_144068128
H1_mix_00008069	chr1	+	302	1	FSM	ENSG00000207205.1	ENST00000384476.1	165	1	23	-160	23	160	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTACTCTCTTGGGAGGCG	22	False	NA	NA	False	NA	NA	NA	144412598	144412900	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_144412600_144412900
H1_mix_00008070	chr1	+	1433	1	FSM	ENSG00000223612.3	ENST00000433527.1	519	1	-126	-788	-126	788	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGTTTATGGAAGTGCA	0	True	NA	NA	False	NA	NA	NA	145232874	145234307	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_145232900_145234300
H1_mix_00008071	chr1	+	1388	2	Genic_Genomic	ENSG00000271121.2	novel	546	1	NA	NA	-389	498	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATTTGGGCTATTTCTGT	NA	False	NA	NA	False	NA	NA	NA	146297780	146299213	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_+_146298380_146298424
H1_mix_00008072	chr1	+	3703	5	NNC	ENSG00000268043.8	novel	7061	36	NA	NA	-406	-40890	intron_retention	FALSE	canonical	3	25	junction_3	5.84700778176325	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCCACAAGTAACATTATA	13	False	NA	NA	False	NA	NA	NA	146938337	146953711	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_146939013_146943290_146943563_146946554_146946608_146949323_146949423_146951107
H1_mix_00008073	chr1	+	4703	4	NNC	ENSG00000268043.8	novel	7061	36	NA	NA	-406	-40890	intron_retention	FALSE	canonical	2	5	junction_2	19.6129209111409	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCCACAAGTAACATTATA	13	False	NA	NA	False	NA	NA	NA	146938337	146953711	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_146939013_146943290_146943563_146948030_146949423_146951347
H1_mix_00008074	chr1	+	2505	18	FSM	ENSG00000131778.20	ENST00000361293.10	2505	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	176.100317431026	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCTAATGGTTTTATTG	-40	True	NA	18	True	AATAAA	-6	NA	147242680	147295753	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_147242831_147264428_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
H1_mix_00008075	chr1	+	4623	9	ISM	ENSG00000116128.12	ENST00000683836.1	6117	10	8	2832	8	-2832	5prime_fragment	FALSE	canonical	3	44	junction_1	27.1523479647709	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGTGGAATCTCGAGTTT	-11	True	NA	9	True	ATTAAA	-17	NA	147541508	147623348	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_147541675_147604776_147604912_147606783_147606867_147611577_147611890_147612882_147613200_147614426_147614617_147615802_147615903_147618815_147621058_147622270
H1_mix_00008076	chr1	+	5847	10	NIC	ENSG00000116128.12	novel	6189	10	NA	NA	120	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_5	31.8134997356798	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAACTGCCTTTTTTGTTC	13	False	NA	21	True	AATAAA	-21	NA	147541620	147626216	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_147541675_147604776_147604912_147606783_147606867_147611577_147611890_147612882_147612978_147614426_147614617_147615802_147615903_147618815_147621058_147622270_147622532_147623841
H1_mix_00008078	chr1	+	408	1	Genic_Genomic	ENSG00000198658.4	novel	NA	NA	NA	NA	3000	236	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTAACAGGCACTTCATA	NA	False	NA	NA	False	ATTAAA	-26	NA	148149394	148149802	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_+_148149400_148149800
H1_mix_00008079	chr1	+	2010	2	FSM	ENSG00000232265.8	ENST00000657111.1	1968	2	-42	0	11	0	multi-exon	FALSE	canonical	2	2	junction_1	0	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGTTTTTGAGCATTC	482	False	NA	15	True	AGTAAA	-21	NA	148156153	148158546	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_148156407_148156789
H1_mix_00008080	chr1	+	1285	2	Genic_Genomic	ENSG00000177144.8	novel	3642	1	NA	NA	-123	-2432	multi-exon	FALSE	canonical	3	146	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCAAAATTTCCAGATTT	NA	False	NA	NA	False	AAGAAA	-41	NA	148748650	148749983	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_+_148749163_148749210
H1_mix_00008081	chr1	+	2153	1	FSM	ENSG00000177144.8	ENST00000322209.5	3642	1	-123	1612	-123	-1612	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGCAACCTCCGCCTCCCA	NA	False	NA	NA	False	NA	NA	NA	148748650	148750803	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_148748600_148750800
H1_mix_00008082	chr1	+	5675	19	FSM	ENSG00000178104.19	ENST00000313431.13	5676	19	0	1	0	-1	multi-exon	FALSE	canonical	1	1	junction_18	60.6381699453487	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTTTTGTGTCCAGAT	-23	True	NA	NA	False	AATAAA	-14	NA	148952123	148993879	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_148953906_148960653_148960786_148961836_148961957_148962195_148962289_148962427_148962641_148965483_148965643_148966542_148966657_148966838_148966977_148967725_148967906_148968835_148969031_148972179_148972345_148972510_148972593_148974513_148974606_148977936_148978054_148978277_148978416_148979736_148979850_148981269_148981398_148991884_148991974_148992254
H1_mix_00008083	chr1	+	1118	7	FSM	ENSG00000178104.19	ENST00000479369.6	2548	7	0	1430	0	-735	multi-exon	FALSE	canonical	1	3	junction_3	5.02493781056044	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGGGGACCCATTGAC	NA	False	NA	NA	False	NA	NA	NA	149008448	149020336	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_149008496_149009567_149009792_149010442_149010596_149016298_149016551_149017747_149017880_149018541_149018662_149020146
H1_mix_00008084	chr1	+	3970	15	NNC	ENSG00000271383.8	novel	13941	94	NA	NA	12	826	intron_retention	TRUE	non_canonical	0	0	junction_6	18.0979477921038	215	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTTTTTTTTCCCTAAG	NA	False	NA	NA	False	NA	NA	NA	149477971	149557187	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_149478048_149478879_149479095_149480141_149480215_149480678_149480885_149482174_149482227_149486129_149486294_149487331_149487384_149540300_149540381_149545117_149545211_149545929_149545982_149546589_149546763_149552208_149552261_149552886_149553060_149553773_149556254_149557158
H1_mix_00008085	chr1	+	772	1	NIC	ENSG00000277147.7	novel	323	3	NA	NA	16	1483	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTCCGGCCTCCCCGA	83	False	NA	NA	False	NA	NA	NA	149607424	149608196	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_149607400_149608200
H1_mix_00008086	chr1	+	382	2	FSM	ENSG00000136631.15	ENST00000643611.1	382	2	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGGCATCATAATTATC	25	True	NA	NA	False	AATAAA	-16	NA	150067798	150068859	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_150067951_150068629
H1_mix_00008088	chr1	+	1531	12	FSM	ENSG00000118298.12	ENST00000647854.1	1531	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	120.024997396376	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGGAAATTAAAGTTTC	-7	True	NA	-1	True	GATAAA	-36	NA	150257250	150265049	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_150257329_150258079_150258184_150260150_150260172_150261458_150261639_150262157_150262301_150262524_150262621_150262803_150262871_150263041_150263200_150263298_150263420_150263658_150263680_150263793_150263879_150264592
H1_mix_00008090	chr1	+	1569	10	NIC	ENSG00000118298.12	novel	1788	11	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	132.415172007507	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCCTATCCTTTGAGG	-16	True	NA	28	True	ATTAAA	-15	NA	150257852	150265078	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_150258184_150261577_150261639_150262157_150262301_150262524_150262621_150262803_150262871_150263041_150263200_150263298_150263420_150263658_150263680_150263793_150263879_150264592
H1_mix_00008091	chr1	+	1433	6	FSM	ENSG00000159208.16	ENST00000369095.5	1433	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	44.7812460746684	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGCTGATTGGGGGAA	-16	True	NA	20	True	ATTAAA	-21	NA	150282542	150287093	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_150282619_150283207_150283634_150283804_150283881_150284425_150284505_150284596_150284709_150286429
H1_mix_00008092	chr1	+	2568	17	NIC	ENSG00000143374.18	novel	2727	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_7	66.9743421020319	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGGTCATATGTCTTC	7	True	NA	15	True	AATAAA	-29	NA	150487430	150507602	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_150487517_150487857_150488055_150488963_150489088_150490600_150490726_150491393_150491512_150491597_150491663_150492410_150492490_150496809_150496909_150497529_150497748_150498501_150498665_150498896_150499035_150499215_150499294_150504334_150504436_150504631_150504734_150504905_150504979_150505590_150505706_150506915
H1_mix_00008093	chr1	+	4233	19	FSM	ENSG00000143382.16	ENST00000271643.9	4212	19	-21	0	18	0	multi-exon	FALSE	canonical	2	5	junction_5	2.45452467048606	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGAGCTCTTCCTTGTC	-3	True	NA	9	True	ATTAAA	-19	NA	150549386	150560933	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_150549500_150549821_150549896_150552204_150552309_150552542_150552601_150552897_150553254_150553425_150554123_150554364_150554468_150555428_150555566_150556161_150556367_150556620_150556794_150556938_150557051_150557149_150557336_150557493_150557624_150557944_150558150_150558472_150558650_150558961_150559166_150559286_150559467_150559760_150559906_150560059
H1_mix_00008094	chr1	+	1032	2	NIC	ENSG00000288880.1	novel	1082	3	NA	NA	7	1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGTGCCGGTGCGGGTCC	7	True	NA	16	True	AATAAA	-19	NA	150629858	150635727	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_150629994_150634830
H1_mix_00008098	chr1	+	1078	7	FSM	ENSG00000143363.17	ENST00000467771.5	1065	7	-22	9	-22	-9	multi-exon	TRUE	canonical	3	23	junction_2	66.8971017475512	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTCTGTGTCCCTTCTC	-2	True	NA	NA	False	NA	NA	NA	151008397	151028944	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_151008672_151017811_151017905_151018556_151018670_151024610_151024796_151025514_151025674_151027232_151027328_151028785
H1_mix_00008100	chr1	+	2996	9	FSM	ENSG00000143363.17	ENST00000650332.1	2984	9	-12	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	86.4449788883079	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTTATACTATTAAATAA	-3	True	NA	-19	True	NA	NA	NA	151008448	151035681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_151008672_151017811_151017905_151018556_151018670_151024610_151024796_151025514_151025674_151027232_151027328_151028785_151028945_151031371_151031465_151033805
H1_mix_00008101	chr1	+	2755	7	NIC	ENSG00000143363.17	novel	2984	9	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	80.3106814536868	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGGGTCTTACTGTCTTT	17	True	NA	12	True	ATTAAA	-15	NA	151008468	151035712	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_151008672_151017811_151017905_151018556_151018670_151024610_151024796_151025514_151025674_151027232_151027328_151033805
H1_mix_00008102	chr1	+	2753	7	NIC	ENSG00000143363.17	novel	3025	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_6	68.4657254073566	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTTATACTATTAAATAA	4	True	NA	-19	True	NA	NA	NA	151008529	151035681	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_151008672_151017811_151017905_151018466_151018670_151024610_151024796_151025514_151025674_151027232_151027328_151033805
H1_mix_00008103	chr1	+	1403	2	NNC	ENSG00000213190.4	novel	2483	2	NA	NA	28	-1048	intron_retention	FALSE	canonical	3	90	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGAGTCTAATTTTCTCT	11	True	NA	33	True	AATAAA	-17	NA	151060424	151068496	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_151060554_151067222
H1_mix_00008106	chr1	+	840	3	FSM	ENSG00000143373.18	ENST00000459919.1	840	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	3.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTACAGGAGCAGAGGGATG	5678	False	NA	NA	False	AAAAAG	-22	NA	151288190	151289539	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_151288407_151288527_151288707_151289094
H1_mix_00008107	chr1	+	1347	10	FSM	ENSG00000143376.14	ENST00000642479.1	1347	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	18.9899258542686	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAGAAAAGAGGTAATTCT	-2	True	NA	NA	False	NA	NA	NA	151612188	151693471	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_151612513_151658234_151658428_151660797_151660863_151662165_151662271_151665932_151666012_151668471_151668636_151683355_151683446_151692434_151692585_151692910_151693040_151693423
H1_mix_00008108	chr1	+	549	1	FSM	ENSG00000269489.1	ENST00000601909.1	549	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCCGTTTCATTTTGATT	7199	False	NA	NA	False	AATAAA	-15	NA	151798053	151798602	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_151798100_151798600
H1_mix_00008109	chr1	+	2365	5	NNC	ENSG00000234614.1	novel	506	3	NA	NA	-3616	1166	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	19.9311314279947	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGTTCTGATTTTTTTT	7322	False	NA	15	True	AGTAAA	-27	NA	151838260	151851551	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_151838738_151839025_151839106_151841740_151842032_151844044_151844243_151850232
H1_mix_00008110	chr1	+	3843	5	NNC	ENSG00000234614.1	novel	506	3	NA	NA	-3616	1246	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	20.9329286054293	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATGTTGGTATTCCTGCT	7322	False	NA	95	True	NA	NA	NA	151838260	151851631	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_151838859_151839025_151839106_151841740_151843309_151844044_151844243_151850232
H1_mix_00008111	chr1	+	2250	2	FSM	ENSG00000160679.13	ENST00000368686.1	2250	2	0	0	0	0	multi-exon	FALSE	canonical	3	380	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTGTTAACTGAATTC	4265	False	NA	NA	False	AAAAAG	-7	NA	153638341	153644385	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153638449_153642242
H1_mix_00008112	chr1	+	478	3	FSM	ENSG00000143624.14	ENST00000624515.1	478	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	148	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGGCTGGCCCCAATT	1210	False	NA	11	True	ATTAAA	-17	NA	153773033	153774808	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_153773082_153773192_153773332_153774517
H1_mix_00008115	chr1	+	4073	28	NIC	ENSG00000143569.19	novel	3877	27	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	271	junction_27	328.95475233067	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCAGCCTCTGCCTATTC	569	False	NA	7	True	TATAAA	-14	NA	154220874	154270847	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_154221041_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154266500_154266569_154268756_154268955_154269361_154269413_154270199
H1_mix_00008116	chr1	+	3395	25	NNC	ENSG00000143569.19	novel	3451	25	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_17	296.114654971497	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCGTTCTTTCCGTGC	5	True	NA	26	True	AATAAA	-22	NA	154220942	154263504	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_154220976_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255664_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154263102
H1_mix_00008117	chr1	+	3940	28	NIC	ENSG00000143569.19	novel	3877	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	271	junction_27	310.951109650042	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCAGCCTCTGCCTATTC	5	True	NA	7	True	TATAAA	-14	NA	154220942	154270847	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_154220976_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154266500_154266569_154268756_154268955_154269361_154269413_154270199
H1_mix_00008118	chr1	+	3857	27	NIC	ENSG00000143569.19	novel	3997	27	NA	NA	0	-43	combination_of_known_junctions	FALSE	canonical	3	118	junction_26	372.327862215882	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAACCTTGGGGCCCAT	5	True	NA	-10	True	AATAAA	-3	NA	154220942	154271466	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_154220976_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234793_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154266500_154266569_154268759_154268955_154270880
H1_mix_00008119	chr1	+	3949	28	NIC	ENSG00000143569.19	novel	3997	27	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	3	45	junction_27	377.884200696195	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTAGTAGTGGCTTCTTG	5	True	NA	28	True	AATAAA	-41	NA	154220942	154271504	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_154220976_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234793_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154266500_154266569_154268756_154268955_154269361_154269413_154270880
H1_mix_00008120	chr1	+	3916	28	NIC	ENSG00000143569.19	novel	3997	27	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	3	45	junction_27	335.487905043873	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTAGTAGTGGCTTCTTG	5	True	NA	28	True	AATAAA	-41	NA	154220942	154271504	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_154220976_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154266500_154266569_154268756_154268955_154269361_154269413_154270880
H1_mix_00008121	chr1	+	3871	27	NIC	ENSG00000143569.19	novel	3997	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	118	junction_26	292.548787212335	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTGGCTTCTTGGATGCT	5	True	NA	34	True	AAAACA	-41	NA	154220942	154271510	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_154220976_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154266500_154266569_154268756_154268955_154270880
H1_mix_00008122	chr1	+	3797	27	NIC	ENSG00000143569.19	novel	3877	27	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	1	26	junction_1	392.653695457222	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCAGCCTCTGCCTATTC	15	True	NA	7	True	TATAAA	-14	NA	154220952	154270847	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_154220976_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154266500_154266569_154268759_154268955_154269361_154269413_154270199
H1_mix_00008123	chr1	+	3461	25	NIC	ENSG00000143569.19	novel	3451	25	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	179	junction_5	295.781403892958	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCGTTCTTTCCGTGC	19	True	NA	26	True	AATAAA	-22	NA	154220956	154263504	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_154221041_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234793_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154263102
H1_mix_00008124	chr1	+	3921	27	NIC	ENSG00000143569.19	novel	3864	26	NA	NA	11	-7	combination_of_known_junctions	FALSE	canonical	3	118	junction_26	378.353011722241	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGTAGTAGTGGCTTCT	160	False	NA	26	True	AATAAA	-39	NA	154221338	154271502	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_154221397_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234793_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154266500_154266569_154268756_154268955_154270880
H1_mix_00008125	chr1	+	588	2	FSM	ENSG00000160712.13	ENST00000502679.1	588	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCATCTCCCCACCGGT	4196	False	NA	NA	False	NA	NA	NA	154454108	154465248	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_154454582_154465133
H1_mix_00008126	chr1	+	2973	23	NIC	ENSG00000143537.14	novel	2936	23	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_1	34.685005215177	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGAGTTTGTCTGCTTC	7	True	NA	30	True	AATAAA	-21	NA	155051326	155062775	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_155051466_155052619_155052778_155053416_155053494_155053909_155053989_155054149_155054227_155054313_155054507_155055789_155055853_155055931_155056001_155056079_155056250_155056385_155056471_155056952_155057102_155057187_155057363_155057636_155057730_155057850_155058156_155058245_155058442_155058709_155058788_155059901_155059975_155060204_155060344_155060762_155060833_155061417_155061490_155061903_155061976_155062244_155062370_155062459
H1_mix_00008129	chr1	+	1346	6	FSM	ENSG00000169241.19	ENST00000475824.6	1346	6	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	146.577488039603	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGGAGGTTGCAGTGAGC	13	True	NA	-88	True	NA	NA	NA	155135390	155138751	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155135681_155136298_155136377_155136827_155136952_155137560_155137723_155137978_155138099_155138179
H1_mix_00008131	chr1	+	3761	8	FSM	ENSG00000143630.10	ENST00000368358.4	3838	8	77	0	77	0	multi-exon	FALSE	canonical	0	0	junction_3	9.37647947509825	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGCTCTTGGTTTGTG	72	False	NA	NA	False	TATAAA	-14	NA	155277539	155289848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155277869_155282410_155282841_155283973_155284136_155284538_155284758_155285164_155285312_155285723_155285965_155287172_155287338_155287780
H1_mix_00008132	chr1	+	713	6	FSM	ENSG00000160752.15	ENST00000474345.5	713	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	977.803538549539	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGTGTATTGCAGACAGG	-41	True	NA	NA	False	NA	NA	NA	155308853	155318287	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155308966_155310063_155310206_155310335_155310454_155312254_155312396_155317940_155318022_155318168
H1_mix_00008136	chr1	+	2705	13	ISM	ENSG00000125459.17	ENST00000245564.8	2422	14	-11	20	2	0	intron_retention	FALSE	canonical	3	181	junction_10	18.0854453451756	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATATATTGATTTGCAAAA	NA	False	NA	7	True	NA	NA	NA	155610206	155614931	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_155610333_155610424_155610561_155611038_155611109_155611215_155611292_155611548_155611604_155611688_155611828_155611982_155612101_155612181_155612317_155612417_155612571_155612843_155612976_155613048_155613234_155613461_155613567_155613656
H1_mix_00008137	chr1	+	1478	12	FSM	ENSG00000132676.16	ENST00000421487.6	1470	12	-8	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	101.206768140058	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGTTGTGTTAGATTAA	-4	True	NA	15	True	AATAAA	-11	NA	155689082	155738526	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_155689175_155709772_155709825_155717005_155717129_155725381_155725491_155725926_155726020_155727607_155727739_155729041_155729123_155729207_155729367_155731355_155731416_155731943_155732034_155736945_155737064_155738156
H1_mix_00008138	chr1	+	2035	13	NNC	ENSG00000203761.5	novel	1709	14	NA	NA	-40	17	intron_retention	FALSE	canonical	2	4	junction_8	73.2819422201374	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAGCTAGTTTGCAATA	NA	False	NA	NA	False	ACTAAA	-17	NA	155745788	155750154	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_155745913_155746004_155746141_155746618_155746689_155746795_155746872_155747128_155747184_155747268_155747408_155747562_155747681_155747761_155747897_155747979_155748532_155748605_155748789_155749326_155749432_155749521_155749632_155749922
H1_mix_00008139	chr1	+	3520	13	NIC	ENSG00000160789.24	novel	3178	12	NA	NA	210	0	intron_retention	FALSE	canonical	2	34	junction_1	63.1459398712397	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCTGCTGTGGTGTC	264	False	NA	18	True	AATACA	-14	NA	156082840	156140081	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_156083185_156114712_156115275_156130616_156130774_156134402_156134529_156134804_156134976_156135186_156135313_156135900_156136122_156136213_156136437_156136920_156137029_156137112_156137233_156137653_156137744_156138487_156138758_156139079
H1_mix_00008140	chr1	+	2356	11	NIC	ENSG00000160789.24	novel	2029	10	NA	NA	268	0	intron_retention	FALSE	canonical	1	1	junction_1	58.3096046976825	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGCTGGCCTGGCCTTTCT	16	True	NA	16	True	ATTAAA	-19	NA	156082898	156137866	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_156083185_156114669_156115275_156130616_156130774_156134402_156134529_156134804_156134976_156135186_156135313_156135900_156136122_156136213_156136437_156136920_156137029_156137112_156137233_156137653
H1_mix_00008143	chr1	+	1030	5	FSM	ENSG00000160783.19	ENST00000368279.7	1019	5	-11	0	-11	0	multi-exon	FALSE	canonical	3	19	junction_3	524.46615715411	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTGAGCATGCTTCCT	NA	False	NA	31	True	AATAAA	-19	NA	156212981	156240040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156213177_156232319_156232426_156233627_156233729_156236348_156236484_156239547
H1_mix_00008144	chr1	+	2476	7	FSM	ENSG00000163382.13	ENST00000681734.1	2452	7	-24	0	-14	0	multi-exon	TRUE	canonical	2	2	junction_6	874.974856781611	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTCCTACCTGCCAGGGG	-40	True	NA	NA	False	NA	NA	NA	156591741	156598309	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156591987_156592100_156592210_156592364_156592476_156592556_156592671_156593407_156593556_156593944_156594091_156596706
H1_mix_00008145	chr1	+	3300	14	FSM	ENSG00000132692.19	ENST00000329117.10	3297	14	-3	0	0	0	multi-exon	TRUE	canonical	2	7	junction_8	7.1235919401786	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGATGCTTCTGTGTGTA	-3	True	NA	8	True	AATAAA	-22	NA	156642113	156659528	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_156642276_156646046_156646146_156646800_156647176_156647507_156647683_156647982_156648111_156648567_156648862_156651455_156651690_156652247_156652893_156656281_156656390_156656937_156657097_156657674_156657758_156658126_156658272_156658542_156658734_156659026
H1_mix_00008146	chr1	+	1023	4	NIC	ENSG00000132692.19	novel	3297	14	NA	NA	117	-4	combination_of_known_splicesites	FALSE	canonical	2	6	junction_2	10.8730042868667	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGTTGGATGCTTCTGTG	NA	False	NA	4	True	AATAAA	-18	NA	156656845	156659524	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_156657097_156657674_156657758_156658542_156658734_156659026
H1_mix_00008147	chr1	+	372	1	FSM	ENSG00000224520.2	ENST00000414328.2	1447	1	248	827	248	-827	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTGGAGTCTCGCCTGG	323	False	NA	NA	False	NA	NA	NA	157073504	157073876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_157073500_157073900
H1_mix_00008148	chr1	+	6351	3	NIC	ENSG00000183853.18	novel	7519	13	NA	NA	6428	0	intron_retention	FALSE	canonical	3	69	junction_1	9.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGTTTTGTGTTATTTA	6512	False	NA	NA	False	TATAAA	-20	NA	158093107	158100261	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_158093763_158094312_158094391_158094643
H1_mix_00008149	chr1	+	2054	7	FSM	ENSG00000158473.8	ENST00000368171.5	3607	7	22	1531	22	-1531	multi-exon	FALSE	canonical	0	0	junction_1	6.90410505906933	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATGTGTATTATGTTGA	NA	False	NA	16	True	AATAAA	-16	NA	158178051	158184896	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_158178069_158180818_158181163_158181454_158181722_158182031_158182311_158182877_158183157_158183935_158184036_158184128
H1_mix_00008150	chr1	+	841	4	FSM	ENSG00000158481.13	ENST00000443761.1	855	4	15	-1	15	1	multi-exon	FALSE	canonical	0	0	junction_2	1.4142135623731	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAATTTGGAATGTTTTTC	424	False	NA	7	True	AATAAA	-23	NA	158291284	158293618	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_158291401_158292083_158292366_158292595_158292875_158293454
H1_mix_00008151	chr1	+	391	1	FSM	ENSG00000235226.1	ENST00000426330.1	420	1	57	-28	57	28	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAAGTCAGGTAGTGT	82	False	NA	NA	False	ATTAAA	-7	NA	159759226	159759617	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_159759200_159759600
H1_mix_00008152	chr1	+	434	4	FSM	ENSG00000018625.15	ENST00000463989.1	444	4	0	10	0	-10	multi-exon	FALSE	canonical	3	51	junction_3	9.0921211313239	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACGCAGACTCCACTCCC	2168	False	NA	NA	False	NA	NA	NA	160136670	160140048	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_160136716_160136900_160137032_160139639_160139742_160139892
H1_mix_00008153	chr1	+	1878	11	FSM	ENSG00000143318.13	ENST00000368078.8	1878	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.41774468787578	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTATTTTGGTGAAGT	-15	True	NA	NA	False	AATAAA	-21	NA	160190574	160201886	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_160191031_160192801_160192887_160193746_160193848_160195011_160195124_160195460_160195535_160195896_160196028_160197568_160197615_160198676_160198732_160198952_160199054_160199850_160199926_160201244
H1_mix_00008154	chr1	+	2400	4	FSM	ENSG00000162734.13	ENST00000368077.5	1021	4	-38	-1341	-38	0	multi-exon	FALSE	canonical	3	17	junction_2	198.488174850684	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATTTTAAAATTTCTGTG	5	True	NA	44	True	AATAAA	-25	NA	160205341	160215376	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_160205523_160211542_160211651_160213109_160213266_160213421
H1_mix_00008155	chr1	+	1059	7	NNC	ENSG00000143222.12	novel	888	6	NA	NA	-467	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	386.789204721239	345	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGGTTCTCATTGGGA	NA	False	NA	24	True	AATAAA	-18	NA	161153510	161158856	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_161153630_161153925_161154121_161156949_161157018_161157253_161157318_161157616_161157694_161158120_161158212_161158411
H1_mix_00008156	chr1	+	2322	14	NIC	ENSG00000143258.16	novel	2315	14	NA	NA	-7	0	intron_retention	FALSE	non_canonical	3	9	junction_1	50.4371423203554	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGCTTATTTGTATTT	35	False	NA	3	True	AATAAA	-16	NA	161159529	161165723	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_161159679_161160328_161160507_161160619_161161241_161162037_161162098_161162269_161162391_161162614_161162727_161162918_161163075_161163554_161163620_161163877_161163982_161164163_161164251_161164533_161164613_161164834_161164943_161165028_161165144_161165356
H1_mix_00008157	chr1	+	1486	11	NIC	ENSG00000143224.18	novel	1667	13	NA	NA	2	0	combination_of_known_splicesites	TRUE	canonical	2	12	junction_3	98.2193463631275	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTGGCTGTTCTAT	-16	True	NA	10	True	AATAAA	-16	NA	161166440	161171218	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_161166673_161166839_161166935_161167099_161167235_161168412_161168577_161168992_161169184_161169659_161169721_161169905_161170025_161170408_161170520_161170619_161170770_161170906_161170950_161171033
H1_mix_00008158	chr1	+	1468	12	NIC	ENSG00000143224.18	novel	1686	13	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	111.105042993162	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTGGCTGTTCTAT	57	True	NA	10	True	AATAAA	-16	NA	161166513	161171218	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_161166612_161166839_161166935_161167099_161167235_161167370_161167487_161168412_161168577_161168992_161169184_161169659_161169721_161169905_161170025_161170408_161170520_161170619_161170770_161170906_161170950_161171033
H1_mix_00008159	chr1	+	1553	13	NNC	ENSG00000143224.18	novel	1176	10	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	102.921761007519	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTGGCTGTTCTAT	9	False	NA	10	True	AATAAA	-16	NA	161166678	161171218	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_161166748_161166839_161166935_161167099_161167235_161167370_161167487_161167994_161168128_161168431_161168577_161168992_161169184_161169659_161169721_161169905_161170025_161170408_161170520_161170619_161170770_161170906_161170950_161171033
H1_mix_00008160	chr1	+	1702	14	FSM	ENSG00000158864.13	ENST00000679282.1	1709	14	7	0	7	0	multi-exon	FALSE	canonical	2	3	junction_1	474.083057661978	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTACTAAAAAAGGAGAAAT	13	False	NA	-35	True	NA	NA	NA	161197430	161214337	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161197488_161202146_161202481_161203436_161203544_161206406_161206598_161209192_161209314_161209482_161209596_161209856_161209932_161210110_161210189_161210303_161210390_161210590_161210711_161213379_161213476_161213648_161213733_161213863_161213922_161214155
H1_mix_00008161	chr1	+	2184	13	FSM	ENSG00000158864.13	ENST00000677807.1	2191	13	7	0	7	0	multi-exon	FALSE	canonical	3	3	junction_1	371.75708915007	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCGGCCCCTAGGCCTA	13	False	NA	1	True	AATAAA	-8	NA	161197430	161214373	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161197488_161202146_161202481_161203436_161203544_161206406_161206598_161209192_161209314_161209482_161209596_161209856_161209932_161210110_161210711_161212350_161212481_161213379_161213476_161213648_161213733_161213863_161213922_161214155
H1_mix_00008163	chr1	+	2525	9	FSM	ENSG00000158864.13	ENST00000677736.1	2508	9	-17	0	0	0	multi-exon	FALSE	canonical	3	1146	junction_1	77.9887812444841	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGTGTATGTTCATGT	205	False	NA	-82	True	NA	NA	NA	161202269	161214290	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161202481_161203436_161203544_161206406_161206598_161209192_161209314_161209482_161210390_161210590_161210711_161212350_161212481_161213379_161213476_161213648
H1_mix_00008164	chr1	+	1621	13	FSM	ENSG00000158864.13	ENST00000678783.1	1604	13	-17	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	369.900315024948	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTAGGCCTAAACTTCTG	205	False	NA	9	True	AATAAA	-16	NA	161202269	161214381	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161202481_161203436_161203544_161206406_161206598_161209192_161209314_161209482_161209596_161210110_161210189_161210303_161210390_161210590_161210711_161212350_161212481_161213379_161213476_161213648_161213733_161213863_161213922_161214155
H1_mix_00008166	chr1	+	1615	14	FSM	ENSG00000158864.13	ENST00000676972.1	1613	14	-2	0	0	0	multi-exon	FALSE	canonical	3	1146	junction_1	69.0093038920741	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGTATCTTAGTGTCT	-2	True	NA	23	True	AATAAA	-30	NA	161202364	161214395	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161202481_161203436_161203544_161206406_161206598_161209192_161209314_161209482_161209596_161209856_161209932_161210110_161210189_161210303_161210390_161210590_161210711_161212350_161212481_161213379_161213476_161213648_161213733_161213863_161213922_161214155
H1_mix_00008167	chr1	+	2683	9	FSM	ENSG00000158882.15	ENST00000545897.5	2807	9	124	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	18.0792526117647	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTCAATGTTTCACCAAC	3	True	NA	10	True	AGTAAA	-15	NA	161226062	161230744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_161226137_161226354_161226605_161226887_161226956_161227257_161227351_161227883_161227990_161228185_161228309_161228427_161228505_161228714_161228818_161228955
H1_mix_00008169	chr1	+	2963	6	FSM	ENSG00000117152.14	ENST00000421743.6	3311	6	140	208	-20	3	multi-exon	FALSE	canonical	0	0	junction_1	1.09544511501033	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGAGTGTGTTTTTCAG	-12	True	NA	NA	False	AGTAAA	-18	NA	163068914	163076594	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_163068993_163069251_163069529_163072394_163072500_163072804_163072867_163073455_163073623_163074320
H1_mix_00008171	chr1	+	6762	9	NIC	ENSG00000185630.19	novel	7087	9	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	57.4499782419454	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATACTTGTATTT	11	False	NA	16	True	AATAAA	-17	NA	164559193	164851821	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_164559530_164559721_164560014_164563237_164563312_164792493_164792739_164799698_164799890_164807541_164807678_164811989_164812150_164821536_164821627_164846583
H1_mix_00008173	chr1	+	432	1	FSM	ENSG00000230659.3	ENST00000415894.1	435	1	46	-43	46	43	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAACAAAAAAGAAAAGATA	NA	False	NA	NA	False	AATAAA	-40	NA	165819398	165819830	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_165819400_165819800
H1_mix_00008174	chr1	+	359	1	FSM	ENSG00000225171.2	ENST00000425573.2	462	1	-127	230	-127	-230	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCTGAAAAACACTTTACT	NA	False	NA	NA	False	NA	NA	NA	166868620	166868979	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_166868600_166869000
H1_mix_00008177	chr1	+	2801	18	NIC	ENSG00000143164.16	novel	3186	19	NA	NA	-178	0	combination_of_known_splicesites	FALSE	canonical	2	12	junction_10	30.7212042007349	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCTGAATTTGACTTTTT	96	False	NA	8	True	ATTAAA	-20	NA	167936974	168075834	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_167937009_167951799_167951862_167966628_167966722_167974829_167975016_167987494_167987609_167991203_167991340_167993225_167993441_168002481_168002576_168003869_168003990_168004532_168004794_168043024_168043141_168044584_168044672_168044899_168045228_168063620_168063760_168065589_168065747_168066376_168066466_168068357_168068464_168075370
H1_mix_00008178	chr1	+	679	5	FSM	ENSG00000143155.13	ENST00000367830.3	727	5	0	48	0	-48	multi-exon	FALSE	canonical	1	1	junction_4	172.662061553776	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CGTCTCAAAAAAAAAAAATA	10	False	NA	NA	False	NA	NA	NA	168179054	168192347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_168179182_168183901_168184082_168184778_168184879_168191368_168191501_168192207
H1_mix_00008179	chr1	+	2366	2	FSM	ENSG00000143178.13	ENST00000465440.1	2578	2	212	0	212	0	multi-exon	FALSE	canonical	2	5	junction_1	0	197	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGTGTAATGTGCATGT	NA	False	NA	3	True	AATAAA	-15	NA	168308228	168314424	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_168308878_168312707
H1_mix_00008180	chr1	+	858	6	NIC	ENSG00000000460.17	novel	782	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	89.3545745891054	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGAATTTGTAAAATTTA	-18	True	NA	NA	False	AATAAA	-16	NA	169795042	169804386	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_169795214_169798918_169798959_169800882_169800972_169802620_169802726_169803168_169803310_169804074
H1_mix_00008181	chr1	+	2695	23	NIC	ENSG00000000460.17	novel	3727	23	NA	NA	21	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	57.6737941263241	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTTATGTCTGTACATT	39	False	NA	-44	True	NA	NA	NA	169795099	169853032	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_169795214_169798918_169798959_169802620_169802726_169803168_169803310_169804074_169804241_169806003_169806089_169807790_169807930_169821678_169821760_169823407_169823473_169827050_169827200_169827710_169827841_169829262_169829450_169830258_169830342_169830695_169830748_169832416_169832507_169836926_169837113_169842416_169842540_169843673_169843770_169847689_169847804_169849499_169849605_169850264_169850346_169851816_169851937_169852789
H1_mix_00008182	chr1	+	358	1	FSM	ENSG00000239494.2	ENST00000476398.2	297	1	93	-154	93	154	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCTGCACTTGATTTCC	8774	False	NA	NA	False	AAGAAA	-25	NA	169859848	169860206	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_169859800_169860200
H1_mix_00008183	chr1	+	207	1	FSM	ENSG00000235378.2	ENST00000448483.2	130	1	-81	4	-81	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGTATTTGAGAAATT	NA	False	NA	NA	False	NA	NA	NA	169989985	169990192	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_169990000_169990200
H1_mix_00008184	chr1	+	472	1	NIC	ENSG00000010932.17	novel	3130	9	NA	NA	-5137	-941	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACCAACAAGAACATGCTT	1212	False	NA	NA	False	NA	NA	NA	171270208	171270680	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_171270200_171270700
H1_mix_00008185	chr1	+	661	1	FSM	ENSG00000285665.1	ENST00000649925.1	661	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCCAGTCTCAAGAGGCA	NA	False	NA	NA	False	NA	NA	NA	171339298	171339959	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_171339300_171340000
H1_mix_00008186	chr1	+	10374	35	NIC	ENSG00000117523.18	novel	10624	35	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_4	50.3585844143921	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGGAGCTTATAATCAT	43	False	NA	14	True	AATAAA	-19	NA	171485595	171593511	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_171485736_171512031_171512201_171512994_171513173_171514535_171514646_171515733_171515860_171517590_171517815_171522176_171522260_171523220_171523355_171523434_171523523_171524820_171524966_171527790_171527845_171532342_171532962_171535427_171535598_171536028_171536279_171537262_171537474_171539970_171542230_171545478_171545688_171550085_171550241_171557239_171558144_171561017_171561104_171566232_171566422_171566591_171566844_171568246_171568340_171571319_171571422_171574926_171575129_171577433_171577638_171579353_171579467_171579827_171579965_171583955_171584188_171584418_171584527_171587002_171587222_171587647_171587752_171588378_171588506_171591151_171591205_171591586
H1_mix_00008187	chr1	+	5566	17	FSM	ENSG00000117523.18	ENST00000495585.1	5566	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	49.9297944618241	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGGAGCTTATAATCAT	1341	False	NA	14	True	AATAAA	-19	NA	171541829	171593511	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_171542230_171545478_171545688_171550085_171550241_171557239_171558144_171561017_171561104_171566232_171566422_171566591_171566844_171574926_171575129_171577433_171577638_171579353_171579467_171579827_171579965_171583955_171584188_171584418_171584527_171587002_171587222_171587647_171587752_171588378_171588506_171591586
H1_mix_00008190	chr1	+	5303	1	Intergenic	novelGene_120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGACTCACCTTGAATTC	6772	False	NA	NA	False	AATAAA	-18	NA	173494996	173500299	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_173495000_173500300
H1_mix_00008191	chr1	+	3020	3	FSM	ENSG00000289426.1	ENST00000693292.1	624	3	0	-2396	0	2396	multi-exon	FALSE	canonical	2	8	junction_2	4	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCATATGTATGTTTACTA	10	False	NA	9	True	AATAAA	-17	NA	173637712	173680660	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_173638035_173671233_173671335_173678063
H1_mix_00008192	chr1	+	2716	14	FSM	ENSG00000117593.12	ENST00000648960.1	2716	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	73.983845989889	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGATAAAGTGAATAAAAGTA	-13	True	NA	-23	True	NA	NA	NA	173824652	173858389	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_173825357_173826686_173826787_173828332_173828400_173830659_173830762_173831534_173831631_173833375_173833500_173834472_173834520_173836939_173837047_173838189_173838260_173839366_173839547_173840865_173840974_173845228_173845292_173856665_173856742_173857517
H1_mix_00008195	chr1	+	295	1	FSM	ENSG00000230777.1	ENST00000452777.1	171	1	-19	-105	-19	105	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTATCTGGCTCTCAACTC	12	False	NA	NA	False	AATAAA	-30	NA	175921955	175922250	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_175922000_175922200
H1_mix_00008198	chr1	+	7351	19	NIC	ENSG00000116191.19	novel	7492	20	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_7	24.8846722618613	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATTGGGTGAGGATGTTT	11	True	NA	-84	True	AATAAA	-14	NA	178725257	178921840	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_178725420_178776681_178776822_178784417_178784523_178785556_178785608_178808044_178808129_178811314_178811405_178821611_178821705_178877497_178877636_178878901_178878993_178883465_178883534_178885075_178885212_178885968_178886121_178889641_178889697_178892229_178892308_178893918_178894025_178897663_178897757_178902105_178902212_178906775_178906868_178916329
H1_mix_00008200	chr1	+	1639	4	NIC	ENSG00000186283.14	novel	2031	6	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	164.236279656949	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGGCGTACTTTCTGTT	24	True	NA	19	True	ATTAAA	-20	NA	179082081	179095996	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_179082388_179087910_179088090_179094092_179094218_179094967
H1_mix_00008201	chr1	+	888	4	FSM	ENSG00000143337.19	ENST00000447964.1	888	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	86.4908472999696	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTATTTCTCACTTAGTT	NA	False	NA	NA	False	NA	NA	NA	179903965	179918171	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_179904023_179907822_179907865_179908604_179908674_179917451
H1_mix_00008203	chr1	+	437	1	FSM	ENSG00000270711.1	ENST00000604674.1	411	1	-50	24	-50	-24	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTGCCCAAAATGTGCG	NA	False	NA	NA	False	NA	NA	NA	180970786	180971223	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_180970800_180971200
H1_mix_00008204	chr1	+	331	3	FSM	ENSG00000198216.13	ENST00000644521.1	331	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCTTAGCTTAGGAAGG	NA	False	NA	NA	False	ATTAAA	-11	NA	181776100	181783784	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_181776229_181779442_181779540_181783678
H1_mix_00008205	chr1	+	6088	24	NIC	ENSG00000116698.22	novel	5629	22	NA	NA	-126	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	131.923389580228	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCTGTGTATCGATTCTT	2	True	NA	18	True	ATTAAA	-18	NA	183472351	183554190	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_183472650_183473720_183473899_183512836_183512869_183515873_183515992_183517687_183517821_183526595_183526768_183527625_183527732_183527955_183528028_183528891_183529043_183529397_183529534_183533163_183533327_183533675_183533833_183537144_183537216_183538379_183538441_183540983_183541104_183542075_183542365_183544352_183544498_183544929_183545313_183545965_183546338_183549207_183549289_183549763_183549924_183550750_183550922_183551044_183551191_183551817
H1_mix_00008206	chr1	+	5785	23	NIC	ENSG00000116698.22	novel	5970	24	NA	NA	11	-3	combination_of_known_junctions	FALSE	canonical	3	102	junction_18	80.7545638758384	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAACCAGATCTGTGTATC	11	True	NA	11	True	ATTAAA	-11	NA	183472513	183554183	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_183472650_183512836_183512869_183515873_183515992_183517687_183517821_183526595_183526768_183527955_183528028_183528891_183529043_183529397_183529534_183533163_183533327_183533675_183533833_183537144_183537216_183538379_183538441_183540983_183541104_183542075_183542365_183544352_183544498_183544929_183545313_183545965_183546338_183547102_183547253_183549207_183549289_183549763_183549924_183550750_183550922_183551044_183551191_183551817
H1_mix_00008207	chr1	+	5769	22	NNC	ENSG00000116698.22	novel	5788	22	NA	NA	11	-3	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	89.9888882029331	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAACCAGATCTGTGTATC	11	True	NA	11	True	ATTAAA	-11	NA	183472513	183554183	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_183472650_183512840_183512869_183515873_183515992_183517687_183517821_183526595_183526768_183527955_183528028_183528891_183529043_183529397_183529534_183533163_183533327_183533675_183533833_183537144_183537216_183538379_183538441_183540983_183541104_183542075_183542503_183544352_183544498_183544929_183545313_183545965_183546338_183549207_183549289_183549763_183549924_183550750_183550922_183551044_183551191_183551817
H1_mix_00008210	chr1	+	3718	19	NNC	ENSG00000116668.13	novel	3838	19	NA	NA	111	-4	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	15.8017228315284	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATATTCACTAGTTGGTG	1	True	NA	101	True	AATAAA	-14	NA	185157277	185291777	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_185157310_185160832_185160926_185166571_185166653_185168339_185168399_185174371_185175114_185180390_185180451_185181945_185182058_185184242_185184345_185184742_185184932_185190548_185190643_185202653_185202800_185204699_185204864_185206624_185206764_185214506_185214656_185221848_185222037_185231576_185231709_185271322_185271390_185276603_185276669_185290673
H1_mix_00008211	chr1	+	3802	19	NIC	ENSG00000116668.13	novel	633	5	NA	NA	29	-4	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	15.1613747381501	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATATTCACTAGTTGGTG	16	True	NA	101	True	AATAAA	-14	NA	185157510	185291777	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_185157627_185160832_185160926_185166571_185166653_185168339_185168399_185174371_185175114_185180390_185180451_185181945_185182058_185184242_185184345_185184742_185184932_185190548_185190643_185202653_185202800_185204699_185204864_185206624_185206764_185214506_185214656_185221848_185222037_185231576_185231709_185271322_185271390_185276603_185276669_185290673
H1_mix_00008213	chr1	+	284	1	FSM	ENSG00000225462.1	ENST00000424976.1	1071	1	544	243	544	-243	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTGCAACAGGCCACTC	NA	False	NA	NA	False	NA	NA	NA	187563604	187563888	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_187563600_187563900
H1_mix_00008214	chr1	+	1318	3	NNC	ENSG00000237457.6	novel	526	2	NA	NA	-152	774	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	4	118	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGCTAAATAAACTGGGG	74	False	NA	NA	False	NA	NA	NA	190478398	190481509	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_190478493_190479081_190479141_190480344
H1_mix_00008215	chr1	+	4895	8	NNC	ENSG00000116833.14	novel	1793	4	NA	NA	-3849	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	8.2189427792243	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAAGTTTTTATGTTGTC	23	False	NA	15	True	AATAAA	-27	NA	200038975	200177418	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_200039101_200039657_200039796_200043773_200043893_200045442_200045585_200048171_200048819_200111201_200111322_200120807_200120956_200173962
H1_mix_00008216	chr1	+	5119	7	ISM	ENSG00000116833.14	ENST00000367362.8	4969	8	11599	-3	-3516	-2	3prime_fragment	FALSE	canonical	2	10	junction_1	6.31796380700829	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAAGTTTTTATGTTGTC	24	False	NA	15	True	AATAAA	-27	NA	200039308	200177418	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_200039796_200043773_200043893_200045442_200045585_200048171_200048819_200111201_200111322_200120807_200120956_200173962
H1_mix_00008217	chr1	+	451	2	FSM	ENSG00000118200.15	ENST00000475326.1	451	2	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTTGTTTTTGTTTTTT	3483	False	NA	NA	False	AATAAA	-19	NA	200856093	200857724	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_200856126_200857305
H1_mix_00008218	chr1	+	3997	10	NIC	ENSG00000163362.11	novel	4298	10	NA	NA	216	0	intron_retention	FALSE	canonical	3	14	junction_1	61.385444850601	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGGGATGAGGGATTTT	11	True	NA	-1	True	AATAAA	-23	NA	200891556	200915735	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_200891702_200898391_200898456_200899472_200899598_200900103_200900221_200900936_200901160_200907833_200907888_200908729_200908941_200909223_200909398_200911452_200912138_200913536
H1_mix_00008219	chr1	+	1942	2	FSM	ENSG00000282221.1	ENST00000633182.1	556	2	61	-1447	61	1447	multi-exon	FALSE	canonical	2	8	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAGGCCCTGAGCAAGG	53	False	NA	NA	False	GGGGCT	-23	NA	201399693	201402637	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_201399791_201400792
H1_mix_00008220	chr1	+	494	1	FSM	ENSG00000223396.4	ENST00000482594.2	494	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGGAGAGGATTATTAT	NA	False	NA	NA	False	NA	NA	NA	201520055	201520549	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_201520100_201520500
H1_mix_00008221	chr1	+	754	1	ISM	ENSG00000134369.16	ENST00000685211.1	13891	34	83726	203363	-74	-5934	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCTGGGGAGCAGGCAG	NA	False	NA	NA	False	NA	NA	NA	201622852	201623606	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_201622900_201623600
H1_mix_00008222	chr1	+	10017	28	NIC	ENSG00000134369.16	novel	13091	30	NA	NA	439	1023	intron_retention	FALSE	canonical	3	22	junction_1	23.8997104401306	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCCCAAAGGCCAAAGCCT	21	False	NA	NA	False	AATAAA	-19	NA	201648687	201824367	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_201649426_201712816_201712920_201718389_201718756_201780420_201780560_201781011_201781310_201782175_201782870_201783405_201783853_201785309_201785352_201786428_201786578_201788467_201788639_201789739_201789793_201790688_201790767_201793791_201793876_201794465_201794578_201803592_201803715_201807952_201808150_201808417_201808611_201808702_201808872_201809163_201809262_201809441_201809538_201809945_201810106_201810522_201810759_201811602_201811758_201811902_201811975_201812464_201812662_201813139_201813259_201817087_201817286_201819836
H1_mix_00008223	chr1	+	2117	10	NIC	ENSG00000176393.11	novel	2399	11	NA	NA	42	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	172.09672847157	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACGGATTGAGTGACTAT	11	False	NA	20	True	AATAAA	-20	NA	201982693	202006143	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_201983114_201988903_201989045_201989382_201989532_201996146_201996264_201999901_202000016_202001375_202001489_202001658_202001768_202003236_202003462_202004353_202004497_202005557
H1_mix_00008224	chr1	+	1468	9	NIC	ENSG00000176393.11	novel	2399	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	177.01831649578	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGTGACCCCTGCCTCGC	74	False	NA	NA	False	NA	NA	NA	201982756	202004496	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_201983114_201988903_201989045_201989382_201989532_201996146_201996264_201999901_202000016_202001375_202001489_202001658_202001768_202003236_202003462_202004353
H1_mix_00008226	chr1	+	1602	10	FSM	ENSG00000077157.22	ENST00000480184.5	1808	10	-12	218	9	-218	multi-exon	FALSE	canonical	3	17	junction_7	3.05505046330389	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCAGTTTGGGAGGGTATG	1	True	NA	NA	False	NA	NA	NA	202348707	202438024	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_202349143_202416786_202416918_202422619_202422739_202425565_202425726_202427039_202427185_202428854_202428930_202430730_202430811_202431479_202431620_202434655_202434769_202437820
H1_mix_00008227	chr1	+	8948	10	NNC	ENSG00000077157.22	novel	2046	12	NA	NA	-3638	-4133	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	3.79408246199197	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGTCTCCACAGTTCAG	NA	False	NA	21	True	AATAAA	-18	NA	202493180	202588569	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_202493318_202495292_202495483_202495571_202495683_202496780_202496823_202558876_202558894_202562777_202562923_202564442_202564548_202567777_202567832_202569146_202569198_202580473
H1_mix_00008228	chr1	+	317	4	FSM	ENSG00000077157.22	ENST00000367269.2	576	4	259	0	259	0	multi-exon	FALSE	canonical	2	5	junction_3	3.39934634239519	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGGTATGCGCATGTCTGT	7144	False	NA	NA	False	AAGAAA	-38	NA	202558876	202567827	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_202558894_202562777_202562923_202564442_202564548_202567777
H1_mix_00008230	chr1	+	2674	3	ISM	ENSG00000163485.17	ENST00000337894.9	2901	4	576	0	-4	0	3prime_fragment	FALSE	canonical	3	16	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAGCACATTGCTGGGC	-12	True	NA	13	True	AATAAA	-16	NA	203128301	203167405	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_203128433_203128784_203129183_203165260
H1_mix_00008231	chr1	+	1370	8	FSM	ENSG00000188770.10	ENST00000367222.7	1434	8	-26	90	-26	-90	multi-exon	FALSE	canonical	0	0	junction_7	1.97948663722157	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGGCCTTCTTGTCTTC	-15	True	NA	-1	True	AATAAA	-10	NA	203494126	203508859	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_203494218_203495964_203496237_203496976_203497116_203498680_203498840_203499648_203499852_203502913_203503010_203503549_203503746_203508645
H1_mix_00008232	chr1	+	7084	20	FSM	ENSG00000058673.17	ENST00000638800.1	7078	20	-6	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	248.780705311284	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATGATCCTTTTCTAAAA	26	False	NA	NA	False	AATATA	-12	NA	203795653	203854999	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_203795795_203796450_203796608_203801574_203803017_203816925_203817125_203818569_203818690_203828298_203828423_203829450_203829655_203829779_203829897_203830122_203830204_203831660_203831772_203833790_203833854_203833936_203834103_203837965_203838065_203840305_203840375_203847183_203847688_203848330_203848408_203849710_203850027_203850514_203850682_203851056_203851125_203852140
H1_mix_00008233	chr1	+	4841	20	NIC	ENSG00000058673.17	novel	3004	20	NA	NA	1	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_17	209.945606990803	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGTTGTGAGCTAAGTA	33	False	NA	17	True	AATAAA	-18	NA	203795660	203854124	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_203795776_203796292_203796602_203801574_203801629_203802956_203803017_203816925_203817125_203818569_203818690_203828298_203828423_203829450_203829655_203829779_203829897_203830122_203830204_203831660_203831772_203833790_203833854_203837965_203838065_203840305_203840375_203847183_203847688_203848330_203848408_203849710_203850027_203850514_203850682_203851056_203851125_203852140
H1_mix_00008234	chr1	+	4850	19	NIC	ENSG00000058673.17	novel	5015	20	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	197.763084660209	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGTTGTGAGCTAAGTA	39	False	NA	17	True	AATAAA	-18	NA	203795666	203854124	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_203795795_203801574_203801629_203802651_203803017_203816925_203817125_203818569_203818690_203828298_203828423_203829450_203829655_203829779_203829897_203830122_203830204_203831660_203831772_203833790_203833854_203837965_203838065_203840305_203840375_203847183_203847688_203848330_203848408_203849710_203850027_203850514_203850682_203851056_203851125_203852140
H1_mix_00008236	chr1	+	6030	19	NIC	ENSG00000058673.17	novel	5015	20	NA	NA	8	0	intron_retention	FALSE	canonical	0	0	junction_16	183.555084745159	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGTTGTGAGCTAAGTA	86	False	NA	17	True	AATAAA	-18	NA	203795713	203854124	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_203795795_203796292_203796497_203801574_203803017_203816925_203817125_203818569_203818690_203828298_203828423_203829450_203829655_203829779_203829897_203830122_203830204_203831660_203831772_203833790_203833854_203837965_203838065_203840305_203840375_203847183_203847688_203848330_203848408_203849710_203850027_203850514_203850682_203851056_203851125_203852140
H1_mix_00008237	chr1	+	4692	20	NNC	ENSG00000058673.17	novel	5015	20	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	203.191693397954	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGTTGTGAGCTAAGTA	107	False	NA	17	True	AATAAA	-18	NA	203795734	203854124	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_203795795_203796292_203796497_203801574_203801640_203802956_203803017_203816925_203817125_203818569_203818690_203828298_203828423_203829450_203829655_203829779_203829897_203830122_203830204_203831660_203831772_203833790_203833854_203837965_203838065_203840305_203840375_203847183_203847688_203848330_203848408_203849710_203850027_203850514_203850682_203851056_203851125_203852140
H1_mix_00008243	chr1	+	2491	15	NIC	ENSG00000163531.17	novel	2462	16	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	13.1010593122099	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAAGACTGAGTTTGTG	-27	True	NA	5	True	ATTAAA	-14	NA	204828647	204977139	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_204828783_204920631_204920741_204944225_204944407_204952010_204952117_204954187_204954385_204954828_204954952_204957655_204957827_204968248_204968361_204968797_204968983_204970615_204970748_204973275_204973420_204974178_204974291_204974656_204974824_204975270_204975419_204976670
H1_mix_00008244	chr1	+	7917	23	FSM	ENSG00000184144.12	ENST00000331830.7	7916	23	-1	0	1	0	multi-exon	TRUE	canonical	1	1	junction_3	3.311637381834	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTCAAGGTGGCCTGAT	-3	True	NA	NA	False	AGTAAA	-20	NA	205043210	205078289	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_205043395_205053099_205053256_205057920_205058066_205058180_205058357_205058567_205058664_205059083_205059294_205059582_205059683_205061244_205061421_205061864_205062002_205062439_205062570_205064321_205064473_205064622_205064751_205065086_205065263_205065788_205065910_205066440_205066600_205067100_205067251_205069490_205069562_205069826_205070062_205070425_205070539_205071946_205072134_205072482_205072596_205073067_205073237_205073655
H1_mix_00008245	chr1	+	757	3	FSM	ENSG00000184144.12	ENST00000638928.1	1548	3	137	654	-37	-487	multi-exon	FALSE	canonical	1	2	junction_1	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTGCCTAACCTCTCTG	5419	False	NA	NA	False	NA	NA	NA	205058567	205060033	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_205058664_205059083_205059294_205059582
H1_mix_00008250	chr1	+	2934	1	FSM	ENSG00000206762.1	ENST00000384035.1	107	1	-1335	-1492	-1335	1492	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTGAAGCCTGGAGGTG	1659	False	NA	NA	False	NA	NA	NA	205593705	205596639	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_205593700_205596600
H1_mix_00008253	chr1	+	2512	21	FSM	ENSG00000263528.8	ENST00000578328.6	2493	21	-19	0	0	0	multi-exon	FALSE	canonical	1	4	junction_19	7.98999374217527	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGATGTCGCCAGCATTAC	-10	True	NA	NA	False	NA	NA	NA	206470475	206496274	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_206470699_206471155_206471246_206473195_206473315_206474330_206474472_206474864_206474995_206476180_206476363_206476677_206476839_206477748_206477860_206478159_206478340_206478942_206479134_206479869_206479935_206480021_206480114_206480446_206480534_206484996_206485073_206485193_206485307_206487913_206487991_206490818_206490859_206491647_206491750_206493022_206493120_206493919_206493992_206496111
H1_mix_00008254	chr1	+	470	1	FSM	ENSG00000261000.1	ENST00000562504.1	509	1	38	1	38	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCAGCAATGTCCTGAGC	NA	False	NA	NA	False	NA	NA	NA	206503985	206504455	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_206504000_206504500
H1_mix_00008257	chr1	+	1691	10	FSM	ENSG00000196352.17	ENST00000367063.6	1691	10	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_9	37.1513421321791	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTGATATATTGGTTT	297	False	NA	6	True	AATAAA	-17	NA	207321531	207340766	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_207321866_207322381_207322568_207324558_207324751_207325621_207325722_207326751_207326838_207331107_207331297_207336692_207336819_207337328_207337410_207339396_207339418_207340390
H1_mix_00008258	chr1	+	2243	11	FSM	ENSG00000196352.17	ENST00000314754.12	2220	11	-23	0	0	0	multi-exon	FALSE	canonical	1	7	junction_9	45.4520626594657	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATGTAGTATGTGAAATT	-3	True	NA	4	True	AATAAA	-18	NA	207321677	207360501	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_207321866_207322381_207322568_207324558_207324751_207325621_207325722_207326751_207326838_207331107_207331297_207336692_207336819_207337328_207337410_207339396_207339418_207340390_207340509_207359545
H1_mix_00008260	chr1	+	996	3	NIC	ENSG00000230937.13	novel	1094	4	NA	NA	6	-2	intron_retention	FALSE	canonical	1	1	junction_2	20.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAAGCCTCTCTGCCTCT	8	True	NA	15	True	ACTAAA	-15	NA	209428828	209432543	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_209429409_209430424_209430501_209432203
H1_mix_00008262	chr1	+	5208	9	FSM	ENSG00000143469.20	ENST00000537238.5	5208	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	4.04467242184086	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAAACCCAAT	102	False	NA	NA	False	AATAAA	-14	NA	209938173	210164286	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_209938278_209952708_209952757_209953054_209953260_210013632_210013798_210021038_210021255_210094321_210094594_210100011_210100462_210155720_210155911_210160728
H1_mix_00008263	chr1	+	3450	11	FSM	ENSG00000054392.13	ENST00000537898.5	3446	11	-10	6	-6	0	multi-exon	FALSE	canonical	2	3	junction_4	5.50999092558236	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTATTTGAGGCTGAT	-31	True	NA	15	True	AATAAA	-16	NA	210328895	210676290	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_210329105_210348932_210349067_210362851_210362920_210387467_210387582_210404463_210404680_210418153_210418326_210464504_210464656_210513152_210513189_210587897_210588100_210623525_210623671_210674287
H1_mix_00008264	chr1	+	678	1	FSM	ENSG00000226986.4	ENST00000431591.2	659	1	40	-59	40	59	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTGTACTTGATCATTAA	NA	False	NA	9	True	NA	NA	NA	211207278	211207956	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_211207300_211208000
H1_mix_00008265	chr1	+	4470	12	NNC	ENSG00000117625.14	novel	4474	12	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	42.7514438401	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTCTTAATGTAGGCC	-13	True	NA	6	True	AATAAA	-17	NA	211259371	211316384	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_211259730_211260107_211260165_211271231_211271310_211274209_211274263_211276256_211276419_211278116_211278242_211279237_211279317_211289177_211289397_211295675_211295754_211304082_211304141_211312719_211312962_211313423
H1_mix_00008268	chr1	+	323	1	FSM	ENSG00000238137.2	ENST00000457786.1	533	1	312	-102	312	102	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGACCAGAAAAGCATGT	NA	False	NA	NA	False	CATAAA	-17	NA	211442585	211442908	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_211442600_211442900
H1_mix_00008269	chr1	+	757	3	FSM	ENSG00000203705.11	ENST00000532433.5	561	3	-102	-94	-9	94	multi-exon	FALSE	canonical	3	373	junction_1	18	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTACTGTTCCTGCTTTCTC	NA	False	NA	NA	False	NA	NA	NA	212791818	212797071	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_212791988_212795094_212795128_212796516
H1_mix_00008270	chr1	+	1429	4	NNC	ENSG00000282718.1	novel	554	3	NA	NA	183	2809	intron_retention	FALSE	canonical	3	25	junction_3	2.44948974278318	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCATGCTTTCTCATGTT	6491	False	NA	23	True	AATAAA	-17	NA	212916969	212920386	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_212917201_212917359_212917705_212918335_212918387_212919584
H1_mix_00008271	chr1	+	4404	6	NIC	ENSG00000143494.16	novel	3572	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	101	junction_3	351.252957282925	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTGTTTTTCTTCTAAAT	-9	True	NA	23	True	AATAAA	-19	NA	212950634	212991585	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_212950741_212951181_212951819_212961165_212961255_212972579_212972962_212973954_212974071_212988511
H1_mix_00008272	chr1	+	5369	13	NIC	ENSG00000136643.12	novel	5454	14	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	41.505019776729	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTTCTCATTTGATTTT	-41	True	NA	NA	False	CATAAA	-14	NA	213051246	213274773	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_213051510_213077695_213077817_213104453_213104570_213117316_213117411_213129526_213129890_213167857_213167974_213230496_213230545_213232122_213232256_213240701_213242298_213242568_213242659_213261557_213261641_213262720_213262817_213272523
H1_mix_00008274	chr1	+	3872	18	NNC	ENSG00000136636.13	novel	4019	18	NA	NA	65	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_16	104.703767328275	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATATTGCCAGTGGTTTCA	-17	True	NA	14	True	AATAAA	-15	NA	215567368	215621731	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_215567769_215573785_215573840_215574072_215574119_215575900_215575975_215577669_215577729_215578000_215578082_215578999_215579138_215579908_215580000_215586494_215586686_215595355_215595472_215601866_215601955_215602084_215602202_215604131_215604303_215608016_215608173_215611824_215611922_215618885_215619071_215619158_215619292_215620056
H1_mix_00008276	chr1	+	1100	4	Antisense	novelGene_ENSG00000042781.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	5.18544972870135	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAAAGAAGAAAGCT	NA	False	NA	NA	False	AATAGA	-25	NA	216008263	216052378	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr1_+_216008702_216013451_216013892_216014466_216014525_216052214
H1_mix_00008277	chr1	+	345	3	FSM	ENSG00000092969.12	ENST00000488793.1	405	3	0	60	0	-60	multi-exon	FALSE	canonical	2	7	junction_2	1	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCCCTAAGTTACTTTAA	50	False	NA	NA	False	CATAAA	-40	NA	218347037	218434252	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_218347048_218405168_218405333_218434081
H1_mix_00008278	chr1	+	1508	5	FSM	ENSG00000092969.12	ENST00000479322.1	1508	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.95803989154981	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTAAGTTTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	218434125	218442141	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_218434253_218434337_218434449_218435969_218436148_218437342_218437497_218441203
H1_mix_00008279	chr1	+	1371	1	FSM	ENSG00000281453.1	ENST00000625474.1	1371	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	236	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGATGTCTTTTTCCTAT	455	False	NA	3	True	AATAAA	-15	NA	218442625	218443996	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_218442600_218444000
H1_mix_00008280	chr1	+	930	4	FSM	ENSG00000143353.12	ENST00000469590.5	1701	4	-267	1038	0	0	multi-exon	FALSE	canonical	3	23	junction_2	109.63880091768	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCCTGACTTTTTTATTA	50	False	NA	NA	False	ATTAAA	-17	NA	219173926	219211827	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_219174305_219179146_219179247_219210531_219210648_219211491
H1_mix_00008281	chr1	+	642	2	FSM	ENSG00000143353.12	ENST00000481007.1	642	2	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCCTGACTTTTTTATTA	NA	False	NA	NA	False	ATTAAA	-17	NA	219210341	219211827	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_219210648_219211491
H1_mix_00008282	chr1	+	5383	1	FSM	ENSG00000136630.13	ENST00000549319.2	5626	1	238	5	226	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTAAAGGCCGCTTGGCT	9	False	NA	13	True	AATAAA	-14	NA	220879668	220885051	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_220879700_220885100
H1_mix_00008283	chr1	+	2923	1	Intergenic	novelGene_159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	18	True	AATAAA	-22	NA	221968672	221971595	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_221968700_221971600
H1_mix_00008284	chr1	+	7289	2	FSM	ENSG00000154305.18	ENST00000477519.1	401	2	-3238	-3650	794	1174	multi-exon	FALSE	canonical	3	272	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGATGTAGAAGAACAGCT	5493	False	NA	NA	False	NA	NA	NA	222660732	222669181	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_222664149_222665308
H1_mix_00008287	chr1	+	4114	9	FSM	ENSG00000162909.18	ENST00000474026.5	4130	9	0	16	0	-14	multi-exon	FALSE	canonical	3	129	junction_7	12.0908022893437	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTTAAAATCCAATTCA	373	False	NA	NA	False	ATTAAA	-16	NA	223757623	223776002	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_223759482_223761580_223761618_223762185_223762252_223764149_223764208_223766366_223766432_223769840_223770526_223771808_223771926_223772180_223772240_223774833
H1_mix_00008289	chr1	+	1003	8	NIC	ENSG00000185842.16	novel	2215	11	NA	NA	36	-9	combination_of_known_junctions	FALSE	canonical	3	35	junction_6	78.8504137915715	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATTTCCTATGCCTGTC	8	True	NA	7	True	AATAAA	-7	NA	224929750	224969820	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_224929836_224952669_224952780_224954958_224955099_224960152_224960303_224964478_224964610_224967430_224967515_224968758_224968875_224969633
H1_mix_00008290	chr1	+	282	1	FSM	ENSG00000213032.3	ENST00000423475.1	250	1	28	-60	28	60	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAACAACTTTATATATAT	NA	False	NA	NA	False	AATAAA	-10	NA	225964206	225964488	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_225964200_225964500
H1_mix_00008292	chr1	+	2698	12	ISM	ENSG00000143801.18	ENST00000366783.8	2249	13	151	12	0	0	3prime_fragment	FALSE	canonical	3	85	junction_9	20.2623291719159	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGTTAGAATCTTGGAG	157	False	NA	4	True	AATAAA	-8	NA	226870766	226896086	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_226871405_226875364_226875551_226881887_226882049_226883704_226883920_226885537_226885680_226888090_226888159_226888828_226889050_226890034_226890134_226891277_226891362_226891742_226891845_226894006_226894126_226895423
H1_mix_00008294	chr1	+	3634	8	FSM	ENSG00000163050.18	ENST00000478406.5	3612	8	-22	0	-14	0	multi-exon	TRUE	canonical	3	11	junction_1	75.8021054039627	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGCGCGTGTACCCTCT	13	False	NA	18	True	AATAAA	-18	NA	226940271	226987543	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_226940400_226977448_226977524_226982026_226982764_226982893_226984236_226984547_226984656_226984875_226984942_226985253_226985341_226986452
H1_mix_00008296	chr1	+	5297	1	FSM	ENSG00000280157.1	ENST00000624958.1	2249	1	-2990	-58	-2990	58	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTACACCTCTGCTAGC	9037	False	NA	NA	False	NA	NA	NA	228118532	228123829	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_228118500_228123800
H1_mix_00008299	chr1	+	4579	13	NIC	ENSG00000154358.23	novel	10596	32	NA	NA	-376	-4940	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	6.60597372753547	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCTGTTTGACATGTGT	47	False	NA	NA	False	NA	NA	NA	228213248	228265181	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_228213711_228214173_228214435_228214789_228215099_228215562_228215830_228216420_228216703_228217012_228217289_228243182_228243459_228244295_228244572_228245412_228245689_228246527_228246804_228249964_228250241_228256650_228256927_228264115
H1_mix_00008300	chr1	+	2974	11	FSM	ENSG00000154358.23	ENST00000366706.7	2974	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	3.09192496674806	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATAAATTTACTTCTTA	NA	False	NA	-11	True	TATAAA	-1	NA	228277177	228284195	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_228277314_228277504_228277667_228277753_228277859_228278688_228278956_228279174_228279445_228279820_228280088_228280178_228280446_228280529_228280797_228281932_228282206_228283017_228283285_228283502
H1_mix_00008301	chr1	+	1686	2	FSM	ENSG00000154358.23	ENST00000494839.2	587	2	-375	-724	-375	724	multi-exon	FALSE	canonical	3	9	junction_1	0	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAACAGCCCGTAATCTT	NA	False	NA	NA	False	AATAAA	-10	NA	228293815	228295865	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_228294416_228294779
H1_mix_00008302	chr1	+	2200	1	FSM	ENSG00000154358.23	ENST00000602685.1	2267	1	66	1	66	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGATTGTCTTTCTCCAGT	NA	False	NA	NA	False	AATAAA	-31	NA	228299881	228302081	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_228299900_228302100
H1_mix_00008303	chr1	+	7608	34	NNC	ENSG00000154358.23	novel	20499	81	NA	NA	-371	6	intron_retention	TRUE	canonical	2	2	junction_3	8.65086501829374	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTCCTTGCCTCTCCA	NA	False	NA	10	True	AATAAA	-22	NA	228309112	228361256	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_228309296_228309483_228309560_228315846_228316120_228316708_228316985_228317463_228317752_228317894_228318174_228318883_228319255_228321343_228322215_228323327_228323607_228332859_228332939_228333198_228333324_228333582_228333781_228334511_228334545_228334814_228334914_228335079_228335299_228335790_228335852_228336199_228336271_228337003_228337127_228337243_228337384_228337943_228338145_228338289_228338373_228338852_228339027_228339944_228340102_228340505_228340623_228340723_228340889_228341094_228341254_228341436_228341615_228342118_228342233_228349889_228350058_228350840_228350944_228351320_228351451_228352950_228353063_228356150_228356194_228359596
H1_mix_00008304	chr1	+	1876	4	NNC	ENSG00000168159.15	novel	3118	4	NA	NA	12	-1227	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_1	404.475243027583	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCAGCTCGTTTGCTT	2	True	NA	7	True	AATAAA	-7	NA	228487393	228494961	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_228487879_228488962_228489053_228493052_228493275_228493882
H1_mix_00008305	chr1	+	3914	2	NIC	ENSG00000116574.6	novel	3965	3	NA	NA	-21	-13	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGACTTATGAATATAATG	8	True	NA	NA	False	AATAAA	-2	NA	228735457	228746651	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_228736005_228743284
H1_mix_00008306	chr1	+	776	1	Intergenic	novelGene_171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCACTTTCACTTGGACT	82	False	NA	NA	False	NA	NA	NA	229176951	229177727	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_229177000_229177700
H1_mix_00008307	chr1	+	6639	9	NIC	ENSG00000135763.10	novel	5601	10	NA	NA	-19	1130	combination_of_known_splicesites	FALSE	canonical	3	15	junction_5	47.6049826698845	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGTGCTGAAAGTTCTG	4	True	NA	NA	False	NA	NA	NA	229626227	229661330	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_229626357_229627620_229627760_229632268_229632446_229634916_229638248_229643532_229643694_229647509_229647753_229651234_229651323_229654248_229654389_229659099
H1_mix_00008308	chr1	+	504	5	FSM	ENSG00000135773.13	ENST00000480004.1	510	5	0	6	0	-6	multi-exon	FALSE	canonical	0	0	junction_2	1.78535710713571	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTACACTCTCTGATTTT	5968	False	NA	6	True	AATGAA	-8	NA	230791876	230801756	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_230791929_230792425_230792495_230792849_230792929_230795162_230795280_230801569
H1_mix_00008309	chr1	+	3010	4	FSM	ENSG00000010072.16	ENST00000391858.8	3559	4	0	549	0	62	multi-exon	FALSE	canonical	3	69	junction_1	11.5758369027902	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATCTTCTTTGCTTTTT	NA	False	NA	NA	False	NA	NA	NA	231337103	231352583	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_231338605_231339768_231339869_231347796_231347926_231351303
H1_mix_00008310	chr1	+	2209	10	FSM	ENSG00000162946.23	ENST00000366636.8	2224	10	-13	28	12	-1	multi-exon	FALSE	canonical	0	0	junction_9	4.71404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CACAATAAAAAGAAAAAAAG	-9	True	NA	NA	False	NA	NA	NA	231626801	231866684	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_231626935_231693825_231694806_231701954_231702025_231749925_231750077_231767139_231767270_231770834_231771071_231795241_231795297_231800107_231800211_231818328_231818518_231866522
H1_mix_00008311	chr1	+	5795	1	Intergenic	novelGene_174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	16	True	AATAAA	-22	NA	232118114	232123909	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_232118100_232123900
H1_mix_00008312	chr1	+	7351	5	NNC	ENSG00000235152.1	novel	818	3	NA	NA	-41617	6280	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_3	12.8646803302686	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCAAGCCCAAGTGTGAT	9	False	NA	3	True	AATAAA	-16	NA	232118473	232191923	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_232118714_232152075_232152169_232160170_232160224_232183937_232184078_232185098
H1_mix_00008313	chr1	+	7490	2	FSM	ENSG00000135778.12	ENST00000490098.1	8705	2	1215	0	1215	0	multi-exon	FALSE	canonical	3	639	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCAGCCTCATGCAACTT	NA	False	NA	17	True	ATTAAA	-17	NA	232963117	232978651	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_232970119_232978162
H1_mix_00008314	chr1	+	2627	3	ISM	ENSG00000183780.13	ENST00000366618.8	3143	8	-858	92011	-858	-92011	5prime_fragment	FALSE	canonical	3	23	junction_2	6	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAAATCAGGCCTAGTCA	NA	False	NA	NA	False	NA	NA	NA	233903817	234232500	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_233905131_233905528_233905759_234231416
H1_mix_00008316	chr1	+	200	1	FSM	ENSG00000230026.2	ENST00000421884.2	1388	1	680	508	680	-508	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCCCTACCTCCCACGGT	NA	False	NA	NA	False	NA	NA	NA	235361832	235362032	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_235361800_235362000
H1_mix_00008317	chr1	+	1811	16	FSM	ENSG00000284770.2	ENST00000647418.1	1801	16	-10	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	53.3614925661651	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTTTGAACCTACTAATGA	-19	True	NA	7	True	AATAAA	-1	NA	235367412	235448951	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_235367505_235380018_235380150_235414432_235414619_235419472_235419562_235427139_235427240_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
H1_mix_00008319	chr1	+	420	1	FSM	ENSG00000229795.2	ENST00000434479.2	247	1	-149	-24	-149	24	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCCTAGGCTGGAGTGC	NA	False	NA	NA	False	NA	NA	NA	235432835	235433255	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_+_235432800_235433300
H1_mix_00008320	chr1	+	1376	11	ISM	ENSG00000116977.19	ENST00000450372.6	6281	12	558	4692	8	6	3prime_fragment	FALSE	canonical	2	7	junction_7	16.6805275695944	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGGTGTTCTCAGTCCT	16	True	NA	10	True	NA	NA	NA	236523996	236548289	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_236524062_236525967_236526116_236537496_236537586_236538878_236539090_236540563_236540684_236541653_236541711_236542760_236542788_236542914_236543041_236543559_236543649_236544749_236544916_236548011
H1_mix_00008321	chr1	+	1158	9	ISM	ENSG00000077522.15	ENST00000683111.1	4488	19	53	21423	0	-4968	5prime_fragment	FALSE	canonical	2	8	junction_1	3.31426839589071	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTTGTCTCAGTGCCAA	236	False	NA	NA	False	ACTAAA	-23	NA	236686734	236743172	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_+_236686800_236717857_236717973_236718893_236719014_236720104_236720192_236725932_236726021_236731232_236731315_236737121_236737215_236739301_236739533_236742895
H1_mix_00008327	chr1	+	3104	15	NNC	ENSG00000174371.17	novel	3449	16	NA	NA	10	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	61.4075130017592	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGGTTGTGGTTTTTTTG	2	True	NA	23	True	AATACA	-21	NA	241848213	241889748	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_+_241848354_241848730_241849028_241850408_241850587_241852210_241852292_241853357_241853482_241857344_241857483_241858505_241858719_241860516_241860705_241861405_241861503_241866829_241867056_241872031_241872279_241878748_241879344_241881915_241882018_241885313_241885508_241889464
H1_mix_00008328	chr1	+	3130	15	NIC	ENSG00000174371.17	novel	3449	16	NA	NA	-9	3	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	55.7763390695374	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGTTGTGGTTTTTTTGC	4	True	NA	24	True	AATACA	-22	NA	241848215	241889749	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_+_241848354_241848730_241849028_241849108_241849217_241850408_241850587_241853357_241853482_241857344_241857483_241858505_241858719_241860516_241860705_241861405_241861503_241866829_241867056_241872031_241872279_241878748_241879344_241881915_241882018_241885313_241885508_241889464
H1_mix_00008339	chr1	-	3771	10	NNC	ENSG00000227232.5	novel	1351	11	NA	NA	2590	-8	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_3	92.3880704179688	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGAAACCAACAGTGTGC	2376	False	NA	NA	False	AATAAA	-7	NA	26980	14411	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_14830_14969_15039_15795_15948_16606_16766_16857_17056_17232_17369_17605_17743_17914_18062_18267_18380_24737
H1_mix_00008340	chr1	-	9009	8	Fusion	ENSG00000238009.6_ENSG00000241860.7_ENSG00000239906.1	novel	323	2	NA	NA	2934	-2368	multi-exon	TRUE	canonical	0	0	junction_1	19.2205247438401	65	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTTTTACCAGGTTCC	NA	False	NA	NA	False	NA	NA	NA	143897	131448	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_-_136611_136659_137050_137147_139697_139789_139848_140074_140761_142946_143012_143577_143635_143855
H1_mix_00008342	chr1	-	1393	10	NNC	ENSG00000279457.4	novel	1397	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	110	junction_6	68.0007262125347	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCTCCATGACACCTTCC	4461	False	NA	NA	False	NA	NA	NA	195411	185216	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_185351_185490_185560_186316_186470_187128_187288_187379_187578_187754_187891_188129_188267_188438_188585_188790_188903_195262
H1_mix_00008344	chr1	-	1182	2	FSM	ENSG00000228463.10	ENST00000442116.1	1292	2	0	110	0	-61	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTCAAACACGATTTCAGC	NA	False	NA	NA	False	NA	NA	NA	264733	257973	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_259026_264603
H1_mix_00008345	chr1	-	6008	14	Fusion	ENSG00000237094.12_ENSG00000250575.1	novel	793	5	NA	NA	-9814	424	multi-exon	TRUE	canonical	0	0	junction_1	24.1018548722712	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGTCATGGCAACTTTTTG	NA	False	NA	NA	False	NA	NA	NA	532742	490800	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_-_492302_492349_494899_494991_495050_497108_497300_498398_498457_501555_501621_504979_505104_514358_514424_522858_523388_524479_524539_526695_526762_527644_527861_531151_531284_532347
H1_mix_00008347	chr1	-	4725	7	NNC	ENSG00000228327.4	novel	6432	16	NA	NA	29970	117	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_5	15.7797338380595	163	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCCACGATCAACGTGTTC	NA	False	NA	NA	False	AATGAA	-7	NA	744310	725767	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_729805_736712_736771_738833_739025_740128_740187_740413_740614_743285_743351_744194
H1_mix_00008358	chr1	-	975	4	FSM	ENSG00000162576.17	ENST00000473097.5	975	4	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	8.9938250421547	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTCCTGGAGGAGGACAC	7323	False	NA	NA	False	GGGGCT	-6	NA	1354474	1353191	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1353929_1354029_1354107_1354192_1354233_1354353
H1_mix_00008359	chr1	-	2623	7	FSM	ENSG00000221978.13	ENST00000482365.5	2620	7	0	-3	0	0	multi-exon	FALSE	canonical	2	12	junction_4	616.367968199372	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACATCCGGAGCGTTATG	7569	False	NA	-29	True	AATAAA	-18	NA	1391754	1386498	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1387583_1387776_1387870_1387953_1388066_1388949_1389048_1390229_1390372_1390458_1390564_1390765
H1_mix_00008360	chr1	-	4452	13	FSM	ENSG00000221978.13	ENST00000496007.5	4452	13	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_4	552.56399830447	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACATCCGGAGCGTTATG	14	True	NA	-29	True	AATAAA	-18	NA	1399309	1386498	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1387583_1387776_1387870_1387953_1388066_1388625_1388744_1388949_1389048_1390229_1390372_1390458_1390564_1390765_1392804_1393395_1393461_1395393_1395515_1398232_1398343_1398596_1398672_1399018
H1_mix_00008361	chr1	-	876	2	FSM	ENSG00000235098.9	ENST00000442470.1	876	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGAAGGAGTGTGAGGGC	13	True	NA	NA	False	NA	NA	NA	1421260	1419137	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1419550_1420796
H1_mix_00008362	chr1	-	2238	3	FSM	ENSG00000160075.12	ENST00000378726.1	2238	3	0	0	0	0	multi-exon	FALSE	canonical	3	1597	junction_2	125.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGCCTGGTCCTGAATT	370	False	NA	-6	True	AATAAA	-15	NA	1546487	1541673	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1542168_1543868_1543988_1544862
H1_mix_00008363	chr1	-	2138	7	FSM	ENSG00000189339.12	ENST00000614300.4	2156	7	0	18	0	-18	multi-exon	TRUE	canonical	2	5	junction_5	59.9131315600623	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAAATCACATCGTAA	97	False	NA	NA	False	AATAAA	-2	NA	1692724	1659546	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1660112_1668326_1668473_1675462_1675591_1676063_1676200_1676377_1676847_1690975_1691394_1692448
H1_mix_00008364	chr1	-	6434	10	FSM	ENSG00000189339.12	ENST00000617444.5	6434	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	51.5811717969902	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTGTTTTCTTCCTTG	6	True	NA	-1	True	AATAAA	-14	NA	1692795	1661477	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1666020_1668326_1668473_1669663_1669737_1670097_1670152_1671508_1671630_1675462_1675591_1676063_1676200_1676377_1676847_1690975_1691394_1692448
H1_mix_00008365	chr1	-	1343	7	ISM	ENSG00000008128.23	ENST00000356200.7	2653	19	17895	0	88	0	intron_retention	FALSE	canonical	3	57	junction_6	65.3284436945773	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTGTTTTCTCCGTGA	NA	False	NA	NA	False	ATTAAA	-25	NA	1704936	1702729	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_1703000_1703079_1703270_1703475_1703625_1703823_1703941_1704038_1704147_1704222_1704345_1704549
H1_mix_00008366	chr1	-	246	2	FSM	ENSG00000008128.23	ENST00000498810.1	574	2	166	162	-58	-162	multi-exon	FALSE	canonical	3	82	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAGAAGCATTTACTTTC	2825	False	NA	50	True	AAGAAA	-34	NA	1721713	1719327	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1719456_1721595
H1_mix_00008367	chr1	-	3654	7	NNC	ENSG00000215790.8	novel	732	4	NA	NA	135	-2547	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	67.748103704499	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTGTTTTCTTCCTTG	286	False	NA	-10	True	AATAAA	-14	NA	1745784	1727384	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_1729681_1734689_1734836_1738320_1738449_1738921_1739058_1739235_1739705_1744250_1744669_1745723
H1_mix_00008368	chr1	-	3073	10	NIC	ENSG00000078369.18	novel	3163	12	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	27	junction_8	999.861076769921	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTGGTGTGGTGATTAT	7	True	NA	-6	True	AATAAA	-17	NA	1891087	1785287	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_1787054_1787321_1787438_1789052_1789270_1790394_1790597_1793244_1793312_1804418_1804582_1806474_1806539_1815755_1815863_1825396_1825500_1890819
H1_mix_00008369	chr1	-	3045	10	FSM	ENSG00000078369.18	ENST00000615252.4	3048	10	0	3	0	-2	multi-exon	FALSE	canonical	2	9	junction_7	817.340598723071	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTGGTGTGGTGATTAT	-23	True	NA	-6	True	AATAAA	-17	NA	1891117	1785287	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_1787054_1787321_1787438_1789052_1789270_1790394_1790597_1793244_1793312_1804418_1804582_1806474_1806539_1825396_1825500_1839189_1839239_1890819
H1_mix_00008371	chr1	-	694	1	FSM	ENSG00000272420.1	ENST00000607858.1	568	1	-116	-10	-116	10	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCACATTGCTGTGGCTTC	3561	False	NA	NA	False	AATAAA	-23	NA	2363744	2363050	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_2363000_2363700
H1_mix_00008373	chr1	-	552	2	FSM	ENSG00000116151.14	ENST00000475812.1	552	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAAATGGCTATAGTCACA	3395	False	NA	NA	False	GGGGCT	-24	NA	2388316	2387055	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_2387530_2388238
H1_mix_00008375	chr1	-	1501	8	NIC	ENSG00000227372.12	novel	1874	6	NA	NA	-104	11	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	70.4849093705851	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTACTCGGCTTGGCCCGC	1356	False	NA	NA	False	NA	NA	NA	3746009	3736396	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_3736559_3736925_3737104_3737780_3737855_3738222_3738514_3740232_3740388_3742803_3742912_3743060_3743191_3745606
H1_mix_00008379	chr1	-	1948	5	FSM	ENSG00000198912.12	ENST00000679703.1	1927	5	0	-21	0	1	multi-exon	FALSE	canonical	0	0	junction_3	147.831618742406	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAAAGCAGTCGTATGTT	-18	True	NA	-9	True	AATAAA	-18	NA	3900278	3889131	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_3890074_3890568_3891058_3891625_3891780_3892740_3892997_3900171
H1_mix_00008380	chr1	-	4775	29	ISM	ENSG00000131697.18	ENST00000378156.9	4955	30	6096	0	6095	0	3prime_fragment	TRUE	canonical	3	15	junction_17	12.1711854435811	1511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTTGGCAGTTTTCTTG	6113	False	NA	-10	True	ACTAAA	-13	NA	5986329	5862810	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_5863406_5863889_5864034_5864337_5864518_5865101_5865274_5866372_5866459_5867029_5867116_5867739_5867897_5873251_5873336_5874470_5874658_5874873_5875101_5877092_5877299_5880113_5880240_5887285_5887467_5890867_5891029_5904616_5904805_5905291_5905484_5905631_5905784_5907114_5907223_5909151_5909214_5927648_5927788_5933146_5933330_5947103_5947231_5948069_5948252_5952699_5952837_5961793_5961950_5967298_5967364_5969086_5969260_5978269_5978414_5986154
H1_mix_00008381	chr1	-	607	3	FSM	ENSG00000131697.18	ENST00000468253.1	781	3	174	0	174	0	multi-exon	FALSE	canonical	3	40	junction_1	11	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCATGTTCGCTGCAGCG	NA	False	NA	NA	False	NA	NA	NA	5873667	5867081	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_5867116_5867739_5867897_5873251
H1_mix_00008382	chr1	-	3163	16	NIC	ENSG00000131697.18	novel	3004	20	NA	NA	3	-15	intron_retention	TRUE	canonical	1	1	junction_15	9.29372548192238	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATGTTTCTGAAGCTGT	-2	True	NA	NA	False	AATAAA	-10	NA	5992444	5886509	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_5887467_5904616_5904805_5905291_5905484_5905631_5905781_5907114_5907223_5909151_5909214_5927648_5927788_5933146_5933330_5947103_5947231_5948069_5948252_5952699_5952837_5961793_5961950_5967298_5967364_5969086_5969260_5978269_5978414_5992243
H1_mix_00008384	chr1	-	6658	29	Fusion	ENSG00000171680.23_ENSG00000215788.11	novel	3668	21	NA	NA	14	0	intron_retention	FALSE	canonical	2	12	junction_28	23.2993770171598	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCTTCTTGGCGTTTCTGC	5730	False	NA	NA	False	ATTAAA	-31	NA	6485938	6461150	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_-_6461763_6461993_6462175_6462628_6462667_6462862_6462971_6463071_6463128_6464374_6464454_6464551_6464720_6465087_6465223_6465439_6465561_6466068_6467573_6467824_6469242_6469334_6469451_6469543_6469677_6470235_6470356_6470505_6470644_6470734_6470885_6470989_6471101_6471487_6471638_6471757_6471809_6472526_6472623_6472985_6473175_6473250_6473455_6474012_6474165_6474450_6474588_6475046_6475139_6475461_6475523_6475930_6476037_6477528_6477659_6485835
H1_mix_00008385	chr1	-	4125	13	NNC	ENSG00000162408.11	novel	6627	12	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	1	6	junction_1	21.9108040321056	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTAGTTGTGTAATTTTA	271	False	NA	-2	True	ATTAAA	-17	NA	6554500	6521348	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_6522617_6525103_6526004_6526695_6526830_6528993_6529172_6531967_6532080_6532462_6532761_6533279_6533442_6541829_6541928_6544825_6544923_6545044_6545181_6549570_6549699_6550395_6550616_6554106
H1_mix_00008387	chr1	-	4512	5	NNC	ENSG00000162413.17	novel	4487	4	NA	NA	0	42585	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	24.6411748908204	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTTAAGTCTCATGGCA	-2	True	NA	NA	False	NA	NA	NA	6602869	6548138	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_6548164_6590723_6593659_6595484_6595558_6599046_6599453_6601796
H1_mix_00008389	chr1	-	6774	14	NIC	ENSG00000142599.19	novel	4598	13	NA	NA	162	0	intron_retention	TRUE	canonical	2	7	junction_13	39.7953343880065	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGGGTGTCTCCCGTGC	829	False	NA	-5	True	AATAAA	-18	NA	8424072	8352403	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_8355121_8355418_8355600_8356099_8356247_8358195_8358917_8359763_8359987_8360111_8361491_8361762_8361877_8362682_8362845_8364055_8364256_8364745_8364839_8365811_8365975_8422726_8422808_8423166_8423248_8423560
H1_mix_00008392	chr1	-	1889	13	NIC	ENSG00000074800.16	novel	1837	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	51	junction_11	5469.44111759958	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCGTGTGCCTGTGTAT	-5	True	NA	-26	True	AATAAA	-23	NA	8878692	8861001	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_8861430_8862886_8862946_8863234_8863344_8863890_8864093_8865284_8865483_8866278_8866502_8867116_8867251_8867987_8868058_8870451_8870511_8871890_8871987_8874823_8874918_8876198_8876303_8878579
H1_mix_00008396	chr1	-	289	3	FSM	ENSG00000142583.18	ENST00000487492.1	522	3	233	0	233	0	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACGTACCCAAAGCTGGCC	NA	False	NA	NA	False	NA	NA	NA	9039662	9038430	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_9038507_9038827_9038930_9039551
H1_mix_00008397	chr1	-	3422	16	NNC	ENSG00000171603.18	novel	4647	18	NA	NA	12	-922	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_14	148.377656299353	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGAAGTTCGGAGCTCTG	13	True	NA	6	True	NA	NA	NA	9823953	9729949	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_9730706_9731205_9731391_9731760_9731897_9733400_9733547_9733971_9734143_9734947_9735175_9735466_9735616_9735884_9736043_9741093_9741257_9743883_9744006_9744394_9744644_9749460_9749647_9749763_9749914_9751472_9751663_9773271_9773395_9823642
H1_mix_00008400	chr1	-	959	8	NIC	ENSG00000162441.12	novel	652	5	NA	NA	14	3	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	56.8592964416263	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGCCGGGTGTGGTGGCTT	-17	True	NA	0	True	AATAAA	-26	NA	9943377	9922109	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_9922359_9931890_9931973_9932802_9932899_9934761_9934861_9935491_9935628_9936518_9936628_9942623_9942783_9943348
H1_mix_00008401	chr1	-	1760	1	FSM	ENSG00000271989.1	ENST00000607572.1	797	1	70	-1033	70	1033	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGTGCAATACAGAGGC	NA	False	NA	NA	False	ATTAAA	-18	NA	10430607	10428847	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_10428800_10430600
H1_mix_00008404	chr1	-	1329	7	NNC	ENSG00000116661.11	novel	1287	6	NA	NA	0	3389	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	159.53134488244	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAGAAAAATAAAATTG	0	True	NA	NA	False	AAAAAG	-3	NA	11654429	11644997	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_11645024_11648370_11648829_11649086_11649226_11649778_11649875_11649944_11650075_11650465_11650835_11654318
H1_mix_00008405	chr1	-	7051	12	FSM	ENSG00000177000.13	ENST00000376583.7	7044	12	0	-7	0	0	multi-exon	FALSE	canonical	1	1	junction_11	10.3684199486424	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTACTGTCCTCGTGTACC	2752	False	NA	NA	False	AATAAA	-22	NA	11803514	11785722	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_11790899_11791206_11791327_11792277_11792380_11793906_11794090_11794357_11794539_11794728_11794864_11795097_11795349_11796205_11796400_11800211_11800323_11801160_11801400_11802880_11803130_11803404
H1_mix_00008408	chr1	-	2741	16	FSM	ENSG00000116809.12	ENST00000375733.6	2770	16	31	-2	0	0	multi-exon	FALSE	canonical	2	7	junction_2	18.4190722410827	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTATAGGTCCCTGT	-11	True	NA	-3	True	AATAAA	-17	NA	15976101	15941868	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_15942253_15942330_15942442_15942528_15942739_15943063_15943195_15943398_15943520_15943598_15943716_15943807_15943896_15944299_15944601_15944696_15944840_15944936_15945203_15945714_15945841_15946153_15946295_15946934_15947124_15948290_15948498_15973038_15973126_15975982
H1_mix_00008410	chr1	-	1932	10	ISM	ENSG00000142632.17	ENST00000270747.8	3322	16	6135	250	9	-250	3prime_fragment	FALSE	canonical	3	177	junction_9	34.5728788303387	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGAGTCTGTGATCCAT	-6	True	NA	-7	True	AATAAA	-17	NA	16206517	16198103	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_16198745_16199149_16199255_16201781_16201862_16202415_16202575_16204758_16204920_16205086_16205177_16205350_16205426_16205537_16205668_16205930_16206084_16206179
H1_mix_00008413	chr1	-	1052	1	FSM	ENSG00000238142.3	ENST00000666544.1	1048	1	0	-4	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGGTTTTATCATTTTAT	78	False	NA	-1	True	AATAAA	-31	NA	16889589	16888537	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16888500_16889600
H1_mix_00008414	chr1	-	340	2	FSM	ENSG00000238142.3	ENST00000416869.2	391	2	51	0	-4	0	multi-exon	FALSE	canonical	3	50	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGGTTTTATCATTTTAT	-14	True	NA	-1	True	AATAAA	-31	NA	16889642	16888537	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16888783_16889547
H1_mix_00008415	chr1	-	429	1	FSM	ENSG00000272426.1	ENST00000606899.1	438	1	-3	12	-3	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTTCCCCATTCTCCCT	53	False	NA	NA	False	AATAAA	-9	NA	16904779	16904350	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_16904400_16904800
H1_mix_00008416	chr1	-	6069	9	FSM	ENSG00000169991.11	ENST00000455833.7	6179	9	110	0	110	0	multi-exon	FALSE	canonical	0	0	junction_3	1.8328597873269	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGCTTTTTTTTGTTTTT	109	False	NA	-5	True	AATAAA	-21	NA	18956566	18904279	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_18908667_18910341_18910473_18911383_18911477_18911962_18912084_18916902_18917043_18918361_18918503_18919677_18919774_18921060_18921122_18955667
H1_mix_00008417	chr1	-	15925	106	NNC	ENSG00000127481.15	novel	15892	106	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_51	123.696468528938	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAAGGTGTTGCCTGCTGCT	153	False	NA	-8	True	AATAAA	-26	NA	19210305	19074509	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_19074897_19076739_19076903_19077975_19078067_19081348_19081574_19084503_19084699_19086144_19086271_19086678_19086822_19087815_19087930_19088758_19088978_19092818_19092919_19093312_19093487_19093948_19094140_19094905_19095026_19095544_19095653_19096522_19096651_19097192_19097281_19099596_19099678_19100375_19100574_19101519_19101642_19104083_19104258_19104584_19104667_19105047_19105190_19105732_19105843_19106568_19106727_19106836_19106967_19110095_19110224_19110379_19110465_19110741_19110833_19112523_19112868_19113698_19113828_19113944_19114071_19114810_19114950_19115397_19115638_19117220_19117415_19117822_19117911_19118871_19118958_19119556_19119702_19120179_19120349_19121188_19121435_19121933_19122013_19122832_19123061_19124540_19124691_19126445_19126656_19127622_19127740_19128210_19128319_19128977_19129075_19138006_19138182_19139082_19139221_19140787_19140893_19141346_19141525_19141646_19141775_19143979_19144092_19144785_19144908_19145792_19145931_19146825_19147001_19147992_19148128_19148562_19148627_19150576_19150794_19151642_19151860_19152312_19152477_19153300_19153503_19153767_19153940_19154917_19155076_19155440_19155669_19156270_19156424_19156766_19156926_19157814_19157998_19160110_19160282_19160916_19161148_19161588_19161737_19161826_19161898_19162419_19162612_19163763_19163828_19164252_19164442_19164798_19164998_19165248_19165350_19165655_19165758_19167021_19167232_19168026_19168185_19169434_19169533_19170761_19170884_19172863_19173094_19173180_19173307_19173438_19173622_19174318_19174448_19174953_19175034_19176591_19176728_19177460_19177744_19179050_19179221_19183810_19183897_19184015_19184176_19185098_19185287_19186539_19186658_19187163_19187302_19187440_19187541_19192187_19192379_19192480_19192541_19193432_19193558_19197140_19197266_19197669_19197812_19197946_19198050_19198540_19198681_19198798_19198929_19199650_19199755_19201717_19201816_19210072
H1_mix_00008419	chr1	-	1597	2	Intergenic	novelGene_10	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTATATTTGCTTCCATTT	1895	False	NA	NA	False	NA	NA	NA	19208563	19205012	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_-_19206436_19208389
H1_mix_00008420	chr1	-	1965	5	FSM	ENSG00000211454.16	ENST00000457194.6	1984	5	0	19	0	-19	multi-exon	FALSE	canonical	0	0	junction_2	10.4522724801834	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCACTTTAAGTAAGTCAAC	956	False	NA	-17	True	ATTAAA	-2	NA	19273941	19266000	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_19267462_19268571_19268702_19270450_19270556_19270747_19270936_19273860
H1_mix_00008423	chr1	-	3723	15	NNC	ENSG00000117245.13	novel	3958	15	NA	NA	-233	0	intron_retention	FALSE	canonical	1	1	junction_3	13.4280015076629	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCCCTTCTCTGACCCTC	283	False	NA	-20	True	AATAAA	-16	NA	20717724	20664013	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_20664763_20666213_20666332_20670420_20670537_20671937_20672197_20682652_20682885_20684808_20685021_20686045_20686127_20687387_20687945_20690187_20690336_20698378_20698489_20704446_20704900_20709638_20709829_20713453_20713556_20715492_20715640_20717475
H1_mix_00008424	chr1	-	4275	12	NIC	ENSG00000127483.19	novel	3884	13	NA	NA	-113	0	intron_retention	FALSE	canonical	1	46	junction_11	149.606149606224	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTGAACCGTAGCTTAT	-10	True	NA	-24	True	AATAAA	-16	NA	20786779	20742681	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_20745092_20745542_20745657_20747543_20747656_20749722_20749883_20757165_20757257_20765376_20765532_20767583_20767665_20770929_20771074_20773450_20773611_20776596_20776751_20779811_20779912_20786185
H1_mix_00008425	chr1	-	6385	13	NIC	ENSG00000127483.19	novel	6406	13	NA	NA	0	0	intron_retention	FALSE	canonical	1	21	junction_9	184.793728849824	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTGAACCGTAGCTTAT	0	True	NA	-24	True	AATAAA	-16	NA	20787307	20742681	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_20745092_20745542_20745657_20747543_20747656_20749722_20749883_20757165_20757257_20765376_20765532_20767583_20767665_20770929_20771074_20773450_20776006_20776596_20776751_20779811_20779912_20780344_20780541_20787194
H1_mix_00008426	chr1	-	7841	34	NIC	ENSG00000075151.24	novel	7832	36	NA	NA	-45	9	combination_of_known_junctions	FALSE	canonical	3	15	junction_33	68.7790142466045	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTTCTCCTTTGGACAG	4560	False	NA	-22	True	AATAAA	-32	NA	21113174	20806469	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_20807501_20810737_20810885_20813157_20813240_20817391_20817539_20825099_20825199_20827616_20827699_20829146_20829273_20840855_20841029_20849414_20849531_20851257_20851479_20853559_20853678_20854977_20855072_20857402_20857498_20860384_20860518_20862227_20862333_20864475_20864713_20865115_20865263_20879322_20879521_20886200_20886372_20892618_20892730_20893516_20893637_20895367_20895502_20899696_20899944_20904882_20904972_20941490_20942331_20950002_20950112_20969473_20969597_20973001_20973100_20980333_20980449_20981047_20981228_21002712_21002809_21050865_21050995_21089137_21089214_21111322
H1_mix_00008427	chr1	-	6710	34	NIC	ENSG00000075151.24	novel	6397	37	NA	NA	4	9	intron_retention	FALSE	canonical	3	15	junction_30	62.4536118025283	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTTCTCCTTTGGACAG	-1	True	NA	-22	True	AATAAA	-32	NA	21176880	20806469	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_20807501_20810737_20810885_20813157_20813240_20817391_20817539_20825099_20825199_20827616_20827699_20829146_20829273_20840855_20841029_20849414_20849531_20851257_20851479_20853559_20853678_20854977_20855072_20857402_20857498_20860384_20860518_20862227_20862333_20864475_20864713_20865115_20865263_20879322_20879521_20886200_20886372_20893516_20893637_20895367_20895502_20899696_20899944_20904882_20904972_20941490_20942331_20950002_20950112_20969473_20969597_20973001_20973100_20980333_20980449_20981047_20981228_21001198_21001325_21002712_21002809_21050865_21050995_21089137_21089214_21176174
H1_mix_00008428	chr1	-	6585	33	NIC	ENSG00000075151.24	novel	6397	37	NA	NA	3	9	intron_retention	FALSE	canonical	3	84	junction_25	46.7541671772421	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTTCTCCTTTGGACAG	-2	True	NA	-22	True	AATAAA	-32	NA	21176881	20806469	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_20807501_20810737_20810885_20813157_20813240_20817391_20817539_20825099_20825199_20827616_20827699_20829146_20829273_20840855_20841029_20849414_20849531_20851257_20851479_20853559_20853678_20854977_20855072_20857402_20857498_20860384_20860518_20862227_20862333_20864475_20864713_20865115_20865263_20879322_20879521_20886200_20886372_20893516_20893637_20895367_20895502_20899696_20899944_20904882_20904972_20941490_20942331_20950002_20950112_20969473_20969597_20973001_20973100_20980333_20980449_20981047_20981228_21002712_21002809_21050865_21050995_21089137_21089214_21176174
H1_mix_00008430	chr1	-	6143	34	NIC	ENSG00000075151.24	novel	5762	35	NA	NA	2	5	combination_of_known_splicesites	FALSE	canonical	3	25	junction_18	63.8872687142354	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTGACTTCTCCTTTGG	34	True	NA	-26	True	AATAAA	-28	NA	21176845	20806473	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_20807501_20813157_20813240_20817391_20817539_20825099_20825199_20827616_20827699_20829146_20829273_20840855_20841029_20849414_20849531_20851257_20851479_20853559_20853678_20854977_20855072_20857402_20857498_20860384_20860518_20862227_20862333_20864475_20864713_20865115_20865263_20879322_20879521_20886200_20886372_20892618_20892730_20893516_20893637_20895367_20895502_20899696_20899944_20904882_20904972_20941490_20942331_20950002_20950109_20969473_20969597_20973001_20973100_20980333_20980449_20981047_20981228_21002712_21002809_21050865_21050995_21089137_21089214_21176174_21176359_21176721
H1_mix_00008432	chr1	-	5762	35	FSM	ENSG00000075151.24	ENST00000400422.6	5762	35	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_19	60.2324505303064	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGAGAACTTTTAATTTAT	32	True	NA	67	True	TTTAAA	-44	NA	21176847	20807003	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_20807501_20810737_20810885_20813157_20813240_20817391_20817539_20825099_20825199_20827616_20827699_20829146_20829273_20840855_20841029_20849414_20849531_20851257_20851479_20853559_20853678_20854977_20855072_20857402_20857498_20860384_20860518_20862227_20862333_20864475_20864713_20865115_20865263_20879322_20879521_20886200_20886372_20892618_20892730_20893516_20893637_20895367_20895502_20899696_20899944_20904882_20904972_20941490_20942331_20950002_20950109_20969473_20969597_20973001_20973100_20980333_20980449_20981047_20981228_21002712_21002809_21050865_21050995_21089137_21089214_21176174_21176359_21176721
H1_mix_00008433	chr1	-	5367	32	NIC	ENSG00000075151.24	novel	5325	34	NA	NA	0	-9	combination_of_known_splicesites	FALSE	canonical	2	14	junction_28	60.4941324628675	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAATGTTTAGCAAA	484	False	NA	37	True	TTTAAA	-14	NA	21176836	20807033	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_20807501_20813157_20813240_20817391_20817539_20825099_20825199_20827616_20827699_20829146_20829273_20840855_20841029_20849414_20849531_20851257_20851479_20853559_20853678_20854977_20855072_20857402_20857498_20860384_20860518_20862227_20862333_20864475_20864713_20865115_20865263_20879322_20879521_20886200_20886372_20893516_20893637_20895367_20895502_20899696_20899944_20904882_20904972_20941490_20942331_20950002_20950109_20969473_20969597_20973001_20973100_20980333_20980449_20981047_20981228_21050865_21050995_21089137_21089214_21176174_21176359_21176721
H1_mix_00008434	chr1	-	2078	11	NIC	ENSG00000075151.24	novel	2088	13	NA	NA	23	-2	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	68.4222916891856	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTGGGTTTTGTTGTTG	524	False	NA	NA	False	AATATA	-31	NA	21176796	20941243	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_20941396_20941490_20942331_20950002_20950109_20969473_20969597_20973001_20973100_20980333_20980449_20981047_20981228_21050865_21050995_21089137_21089214_21176174_21176359_21176721
H1_mix_00008435	chr1	-	3228	27	FSM	ENSG00000090686.16	ENST00000529637.5	3228	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	69.7485445543892	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACATGTTAGGGCATTAA	210	False	NA	NA	False	AAGAAA	-22	NA	21782991	21679366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_21679440_21680807_21680835_21687190_21687240_21689973_21690100_21695065_21695222_21701497_21701603_21703511_21703619_21704261_21704393_21705726_21705838_21706125_21706188_21706466_21706590_21706743_21706908_21715388_21715458_21721035_21721167_21721649_21721765_21723897_21724096_21728569_21728720_21729703_21729830_21736445_21736626_21747066_21747150_21748137_21748272_21751506_21751616_21752526_21752652_21752991_21753120_21756545_21756703_21757662_21757784_21782823
H1_mix_00008436	chr1	-	14347	97	NNC	ENSG00000142798.20	novel	14341	97	NA	NA	0	3	at_least_one_novel_splicesite	TRUE	canonical	3	6	junction_85	87.1800076430307	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCCTGAGTCTTTGATGA	-1	True	NA	-10	True	AATAAA	-21	NA	21937310	21822240	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_21823489_21823615_21823720_21824120_21824205_21824305_21824377_21824536_21824616_21824703_21824780_21827862_21827920_21828029_21828153_21828254_21828427_21828834_21829080_21829382_21829605_21829992_21830092_21830981_21831091_21831214_21831325_21831462_21831563_21831651_21831797_21832494_21832607_21833267_21833385_21833466_21833615_21833815_21833926_21834678_21834946_21835539_21835638_21836801_21837007_21838824_21839086_21839370_21839551_21839821_21840018_21841100_21841286_21841538_21841674_21842001_21842143_21842238_21842381_21842769_21842922_21843296_21843439_21844147_21844300_21846107_21846256_21846447_21846600_21847353_21847493_21847688_21847841_21847957_21848094_21848642_21848795_21848892_21849032_21850040_21850193_21850362_21850499_21851545_21851698_21851790_21851927_21852087_21852234_21852699_21852833_21852918_21853071_21854192_21854344_21854610_21854766_21854847_21854984_21855303_21855447_21855522_21855676_21855786_21855913_21857014_21857196_21857284_21857386_21859565_21859677_21859834_21860003_21860176_21860236_21861756_21861844_21861987_21862116_21864099_21864214_21864842_21865074_21865284_21865366_21865716_21865810_21872185_21872378_21872619_21872761_21872996_21873092_21873374_21873425_21873924_21874012_21874405_21874534_21874615_21874730_21874890_21875003_21875628_21875748_21875862_21876043_21876228_21876406_21876511_21876653_21878185_21878254_21878432_21878492_21878576_21878664_21878993_21879122_21880106_21880255_21880362_21880560_21880655_21880836_21881338_21881503_21884527_21884678_21884766_21884919_21885012_21885158_21885319_21885452_21887214_21887335_21887419_21887675_21887937_21888067_21889980_21890142_21890426_21890486_21890584_21890695_21895921_21895967_21896174_21896311_21937154
H1_mix_00008437	chr1	-	1019	2	FSM	ENSG00000228397.3	ENST00000667783.1	1130	2	111	0	90	0	multi-exon	FALSE	canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACGTTTCGGCTTGTGTA	480	False	NA	NA	False	CATAAA	-15	NA	22025372	22023993	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_22024446_22024805
H1_mix_00008438	chr1	-	2896	3	NNC	ENSG00000179546.5	novel	3319	2	NA	NA	21748	1675	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	0.5	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAATAAAAGAAACC	NA	False	NA	-41	True	AATAAA	-14	NA	23195754	23190219	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_23190514_23192484_23195002_23195669
H1_mix_00008439	chr1	-	3187	2	NNC	ENSG00000179546.5	novel	3319	2	NA	NA	21748	-5	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	0	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGTAATGTCTTTGGGT	NA	False	NA	-7	True	AATAAA	-17	NA	23195754	23191899	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_23195002_23195669
H1_mix_00008440	chr1	-	2694	12	NNC	ENSG00000125944.21	novel	7751	11	NA	NA	0	47754	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	615.073401519037	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTAGCCCATGTTGC	-13	True	NA	NA	False	NA	NA	NA	23344295	23256016	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_23256049_23309787_23311067_23311200_23311323_23313552_23313703_23318482_23318689_23321527_23321664_23323555_23323733_23333517_23333632_23337753_23337862_23338489_23338609_23340851_23341018_23344210
H1_mix_00008441	chr1	-	2715	12	NNC	ENSG00000125944.21	novel	7751	11	NA	NA	0	47754	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	615.073401519037	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTAGCCCATGTTGC	333	False	NA	NA	False	NA	NA	NA	23344317	23256016	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_23256048_23309787_23311067_23311200_23311323_23313552_23313703_23318482_23318689_23321527_23321664_23323555_23323733_23333517_23333632_23337753_23337862_23338489_23338609_23340851_23341018_23344210
H1_mix_00008442	chr1	-	374	4	FSM	ENSG00000204219.11	ENST00000374602.2	575	4	97	104	97	-104	multi-exon	FALSE	canonical	2	7	junction_1	0.816496580927726	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAGGAAACCACAGCTTT	5672	False	NA	NA	False	AAAAAG	-16	NA	23419139	23408663	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_23408727_23417248_23417391_23417903_23418010_23419076
H1_mix_00008444	chr1	-	2950	7	NNC	ENSG00000188529.15	novel	2917	6	NA	NA	0	33960	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	629.052307487665	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGTATGGTGGCTCAAG	-3	True	NA	NA	False	NA	NA	NA	23980331	23930386	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_23930413_23969079_23971440_23971572_23971624_23971849_23972013_23974973_23975076_23978710_23978818_23980190
H1_mix_00008445	chr1	-	7215	6	NNC	ENSG00000188529.15	novel	2917	6	NA	NA	0	15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	601.265864655561	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTTGCTCTTAGATTTG	-3	True	NA	-25	True	AATAAA	-39	NA	23980331	23964788	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_23971440_23971572_23971624_23971849_23972013_23974973_23975076_23978710_23978818_23980190
H1_mix_00008446	chr1	-	3575	5	NIC	ENSG00000188529.15	novel	3487	6	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_4	501.034180470754	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGTTTTTTTAAGATT	2117	False	NA	-40	True	AATAAA	-24	NA	23978244	23964803	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_23967724_23971572_23971624_23971849_23972013_23974973_23975081_23977910
H1_mix_00008447	chr1	-	7729	7	NIC	ENSG00000188529.15	novel	2839	7	NA	NA	-75	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_4	581.789982152781	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGTTTTTTTAAGATT	NA	False	NA	-40	True	AATAAA	-24	NA	23980431	23964803	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_23971440_23971572_23971627_23971849_23972013_23974973_23975081_23977910_23978274_23978652_23978818_23980190
H1_mix_00008449	chr1	-	1325	6	ISM	ENSG00000185436.12	ENST00000374421.7	1476	7	-13	1411	0	459	5prime_fragment	FALSE	canonical	3	47	junction_2	22.8613210466937	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGGCAGCTTGGGCATAT	9	True	NA	NA	False	NA	NA	NA	24187261	24158540	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_24159183_24159473_24159634_24161541_24161685_24169416_24169602_24180730_24180855_24187190
H1_mix_00008450	chr1	-	2769	10	NIC	ENSG00000001460.18	novel	6016	10	NA	NA	11	2	combination_of_known_splicesites	FALSE	canonical	3	6	junction_9	32.7617663341483	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGCTTTTGGGTACCCCT	2110	False	NA	-5	True	ATTAAA	-18	NA	24413714	24357002	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_24358620_24360850_24361042_24369673_24369840_24373701_24373811_24379652_24379824_24383901_24384004_24391560_24391680_24401318_24401457_24410702_24410818_24413673
H1_mix_00008451	chr1	-	422	3	FSM	ENSG00000286061.1	ENST00000652351.1	426	3	0	4	0	1	multi-exon	FALSE	canonical	3	3	junction_2	1.5	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTAATGCCTAAGTCCC	5047	False	NA	-13	True	AATAAA	-17	NA	24502382	24496268	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_24496597_24499652_24499712_24502347
H1_mix_00008453	chr1	-	480	1	FSM	ENSG00000224183.1	ENST00000414693.1	480	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTGACTTCCTACTTT	NA	False	NA	NA	False	NA	NA	NA	25294643	25294163	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_25294200_25294600
H1_mix_00008454	chr1	-	4956	1	NIC	ENSG00000117616.18	novel	3034	6	NA	NA	305	2528	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTATATATCTATGTATC	562	False	NA	-14	True	CATAAA	-5	NA	25337795	25332839	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_25332800_25337800
H1_mix_00008455	chr1	-	1526	1	FSM	ENSG00000228172.5	ENST00000536896.2	2307	1	-4	785	-4	-785	mono-exon	FALSE	NA	NA	NA	NA	NA	722	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGCCCTCACTGTCTTG	NA	False	NA	NA	False	NA	NA	NA	25820801	25819275	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_25819300_25820800
H1_mix_00008456	chr1	-	1387	4	FSM	ENSG00000127423.11	ENST00000538789.5	1392	4	1	4	0	-4	multi-exon	FALSE	canonical	1	8	junction_1	92.5718939827611	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACACAATAATAGCTTGAG	-49	True	NA	NA	False	AATAAA	-14	NA	25859457	25831916	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_25832159_25835021_25835847_25837412_25837555_25859279
H1_mix_00008457	chr1	-	1089	1	ISM	ENSG00000182749.6	ENST00000374296.4	3023	2	8681	0	8681	0	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTTGTTTTTTGTCTCC	8804	False	NA	-2	True	AATAAA	-19	NA	25862572	25861483	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_25861500_25862600
H1_mix_00008459	chr1	-	535	1	FSM	ENSG00000223583.1	ENST00000446498.1	535	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTATGGCACAGGAGTAAA	37	False	NA	NA	False	AAGAAA	-32	NA	26455187	26454652	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_26454700_26455200
H1_mix_00008460	chr1	-	3781	12	Fusion	ENSG00000142751.15_ENSG00000198746.13	novel	2125	7	NA	NA	0	2389	intron_retention	FALSE	non_canonical	0	0	junction_1	49.7193778010709	48	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCCTCAACTCATAAATCA	-11	True	NA	NA	False	AAAAAG	-3	NA	26900467	26873742	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_-_26873781_26879382_26879750_26884159_26884291_26885972_26886134_26888968_26889126_26889685_26891227_26892410_26892539_26892669_26892792_26893388_26893449_26894235_26894411_26897300_26897726_26899991
H1_mix_00008461	chr1	-	1471	4	NNC	ENSG00000175707.10	novel	1855	4	NA	NA	0	-325	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	135.775140909111	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTGCATCCCCAGCTGG	-24	True	NA	NA	False	NA	NA	NA	26960468	26949886	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_26950152_26950681_26950757_26951341_26952413_26960408
H1_mix_00008463	chr1	-	946	6	FSM	ENSG00000174950.11	ENST00000374030.3	946	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	3.31058907144937	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCATGTCCTGTGTCTTGG	-1	True	NA	-4	True	AATAAA	-17	NA	27383333	27379175	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_27379510_27380050_27380196_27381779_27381825_27382327_27382400_27382499_27382668_27383151
H1_mix_00008464	chr1	-	947	3	FSM	ENSG00000174950.11	ENST00000374025.4	947	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTCCCTGGAGACGGGGC	26	False	NA	NA	False	NA	NA	NA	27383306	27381775	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_27382400_27382499_27382668_27383151
H1_mix_00008465	chr1	-	6445	7	ISM	ENSG00000126705.15	ENST00000673934.1	6428	9	454	4	-57	-4	3prime_fragment	FALSE	canonical	3	10	junction_4	10.6679686705368	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACCTTGTGTCTTGTGAA	9213	False	NA	-5	True	AAAAAG	-36	NA	27603690	27534248	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_27534917_27547260_27552190_27552891_27552930_27553073_27553186_27558304_27558531_27558705_27558884_27603396
H1_mix_00008467	chr1	-	5897	17	NNC	ENSG00000158161.16	novel	5885	17	NA	NA	8112	2	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_16	21.1231508066387	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTCCTGTGTCTTTTCTG	8252	False	NA	-3	True	AATAAA	-19	NA	28080452	27970341	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_27974547_27978373_27978475_27988534_27988657_27989696_27989812_27993399_27993561_27997319_27997379_27999959_28000050_28004335_28004420_28010946_28011087_28013110_28013295_28017153_28017240_28035543_28035681_28038838_28038906_28042570_28042651_28048382_28048427_28057993_28058095_28080331
H1_mix_00008468	chr1	-	5931	17	FSM	ENSG00000158161.16	ENST00000436342.6	5943	17	17	-5	-10	2	multi-exon	FALSE	canonical	1	2	junction_14	25.1215016221165	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTCCTGTGTCTTTTCTG	-10	True	NA	-3	True	AATAAA	-19	NA	28088620	27970341	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_27974547_27978373_27978475_27988534_27988657_27989696_27989812_27993399_27993561_27997319_27997379_27999959_28000050_28004335_28004420_28010946_28011087_28013110_28013295_28017153_28017240_28027788_28027927_28035543_28035681_28038838_28038906_28048382_28048427_28057993_28058095_28088523
H1_mix_00008469	chr1	-	367	1	FSM	ENSG00000238231.2	ENST00000426041.2	367	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGTGATAATCTTCCAAG	NA	False	NA	NA	False	NA	NA	NA	27990524	27990157	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_27990200_27990500
H1_mix_00008470	chr1	-	1378	1	FSM	ENSG00000228589.3	ENST00000436160.1	681	1	6	-703	6	703	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAGATACAGAGTGTAAAT	21	False	NA	NA	False	AATAAA	-27	NA	28096416	28095038	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_28095000_28096400
H1_mix_00008471	chr1	-	1495	10	NNC	ENSG00000126698.11	novel	1600	10	NA	NA	0	31827	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	867.026079320698	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGTTCTTTTGAATAT	21	True	NA	NA	False	NA	NA	NA	28233004	28167628	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_28167664_28200555_28201371_28203746_28203823_28205257_28205350_28208341_28208414_28209971_28210067_28210570_28210638_28214939_28214997_28228921_28229024_28232920
H1_mix_00008472	chr1	-	1983	1	FSM	ENSG00000270605.1	ENST00000604716.1	1945	1	-40	2	-40	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATTGTTTCTTGAACTT	5705	False	NA	NA	False	AATAAA	-16	NA	28241493	28239510	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_28239500_28241500
H1_mix_00008473	chr1	-	1254	7	NNC	ENSG00000120656.14	novel	1196	7	NA	NA	0	29889	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	188.853558787402	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCGACAGAGACTCTGCC	5185	False	28643102	NA	False	NA	NA	NA	28643085	28557939	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_28558087_28603095_28603575_28605371_28605461_28613246_28613362_28617952_28618031_28621913_28622166_28642991
H1_mix_00008474	chr1	-	393	2	FSM	ENSG00000116350.18	ENST00000477193.1	206	2	-11	-176	0	1	multi-exon	FALSE	canonical	3	672	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGTTGATGTCTTTTGT	882	False	NA	NA	False	NA	NA	NA	29159551	29154695	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_29154911_29159373
H1_mix_00008476	chr1	-	4937	4	ISM	ENSG00000162512.16	ENST00000339394.7	5246	5	30018	-1	0	1	3prime_fragment	FALSE	canonical	3	363	junction_1	21.4527905462721	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCGTGTCCAGAGTATGA	2046	False	NA	-1	True	AATAAA	-17	NA	30878740	30869464	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_30873378_30874296_30874589_30876551_30877166_30878622
H1_mix_00008477	chr1	-	5277	22	NIC	ENSG00000134644.16	novel	3936	22	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	165	junction_10	126.743675122956	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTGTGCTTTATTTTA	4	True	NA	-4	True	AATACA	-14	NA	31065695	30931507	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_30933343_30936642_30936836_30941150_30941273_30941997_30942124_30945345_30945484_30950132_30950262_30952233_30952364_30953713_30953982_30964673_30964911_30965981_30966198_30967166_30967311_30968353_30968493_30974650_30974803_30980061_30980167_30981311_30981406_30992389_30992661_30995053_30995221_31005852_31006032_31006993_31007103_31028795_31028865_31059203_31059578_31065615
H1_mix_00008478	chr1	-	4001	22	FSM	ENSG00000134644.16	ENST00000373741.8	4242	22	247	-6	-18	0	multi-exon	FALSE	canonical	2	4	junction_21	136.375748105012	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAAAAAGG	254	False	NA	5	True	AAAAAG	-5	NA	31065744	30932843	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_30933343_30936642_30936836_30941150_30941273_30941997_30942124_30945345_30945484_30950126_30950262_30952233_30952364_30953713_30953982_30964673_30964911_30965981_30966279_30967166_30967311_30968353_30968493_30974650_30974803_30980061_30980164_30981311_30981406_30992389_30992661_30995053_30995221_31005852_31006032_31006993_31007103_31028795_31028865_31059203_31059578_31065688
H1_mix_00008480	chr1	-	2909	23	FSM	ENSG00000084636.18	ENST00000488128.6	2854	23	-44	-11	-44	11	multi-exon	TRUE	canonical	1	1	junction_22	14.8730856813894	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCCTTTCCCTTCCAGT	2584	False	NA	68	True	AATAAA	-13	NA	31670646	31652499	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_31652854_31653598_31653677_31653866_31654044_31654791_31654859_31655313_31655503_31656097_31656445_31657032_31657069_31658487_31658578_31658913_31658965_31660584_31660639_31661065_31661120_31661413_31661459_31661659_31661705_31662333_31662388_31662586_31662659_31665171_31665235_31665582_31665619_31665881_31665936_31666036_31666082_31667574_31667629_31668164_31668219_31668801_31668856_31669810
H1_mix_00008481	chr1	-	2787	40	ISM	ENSG00000084636.18	ENST00000373672.8	5418	71	19717	325	-552	0	3prime_fragment	FALSE	canonical	3	13	junction_39	10.7884443987249	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGACAGGTTGTGAATG	NA	False	NA	-20	True	AATAAA	-20	NA	31684300	31652587	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_31652854_31653598_31653677_31653866_31654044_31654791_31654859_31655313_31655503_31656399_31656445_31657032_31657069_31658487_31658578_31658913_31658965_31660584_31660639_31661065_31661120_31661413_31661459_31661659_31661705_31662333_31662388_31662586_31662659_31665171_31665235_31665582_31665619_31665881_31665936_31666036_31666082_31667574_31667629_31668164_31668219_31668801_31668856_31670601_31670647_31671614_31671660_31672415_31672503_31672595_31672638_31672723_31672841_31675006_31675040_31675257_31675312_31679631_31679686_31679803_31679852_31680041_31680102_31680904_31680932_31681022_31681068_31682933_31683003_31683193_31683248_31683333_31683370_31683706_31683749_31683949_31684004_31684108
H1_mix_00008485	chr1	-	4586	29	NIC	ENSG00000121753.13	novel	5708	33	NA	NA	-250	12	combination_of_known_junctions	FALSE	canonical	1	13	junction_9	21.4816901151674	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGCTTCCCTCAGGT	8068	False	NA	1	True	AATAAA	-27	NA	31756514	31727104	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_31727606_31728024_31728082_31728181_31728281_31728597_31728634_31730799_31731420_31732114_31732155_31732516_31732613_31732971_31733144_31735182_31735282_31735579_31735666_31735826_31735894_31736320_31736391_31736572_31736724_31737428_31737532_31737651_31737756_31738199_31738327_31738586_31738631_31738831_31738938_31739307_31739636_31739925_31740035_31740109_31740179_31740346_31740542_31741372_31741480_31741623_31741726_31741799_31741968_31742052_31742218_31744192_31744358_31744647_31744732_31755998
H1_mix_00008486	chr1	-	5412	33	FSM	ENSG00000121753.13	ENST00000373655.6	5400	33	0	-12	0	12	multi-exon	FALSE	canonical	1	4	junction_32	26.5762464430175	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGCTTCCCTCAGGT	24	True	NA	1	True	AATAAA	-27	NA	31764035	31727104	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_31727606_31728024_31728082_31728181_31728278_31728597_31728634_31730799_31731420_31732114_31732155_31732516_31732613_31732971_31733144_31735182_31735282_31735579_31735666_31735826_31735894_31736320_31736391_31736572_31736724_31737428_31737532_31737651_31737756_31738199_31738327_31738586_31738631_31738831_31738938_31739307_31739636_31739925_31740035_31740109_31740179_31740346_31740542_31741372_31741480_31741623_31741726_31741799_31741968_31742052_31742218_31742837_31743003_31744192_31744358_31744647_31744732_31755998_31756816_31757200_31757282_31757381_31757512_31763883
H1_mix_00008489	chr1	-	1868	9	FSM	ENSG00000160055.20	ENST00000461402.5	1866	9	0	-2	0	1	multi-exon	FALSE	canonical	3	14	junction_2	19.6909719160838	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCTGTGCCAAATATACC	-2	True	NA	-48	True	AATATA	-14	NA	32222347	32214475	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32215050_32215135_32215796_32216193_32216282_32216383_32216518_32216888_32216948_32217258_32217352_32221130_32221198_32221866_32222019_32222306
H1_mix_00008490	chr1	-	1289	4	ISM	ENSG00000160055.20	ENST00000309777.11	1107	5	109	-3	75	0	3prime_fragment	FALSE	canonical	3	41	junction_2	14.3836326735943	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTTAGTAAGTATTCTTT	101	False	NA	1	True	AATAAA	-19	NA	32222244	32216196	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_32216948_32217258_32217352_32221130_32221198_32221866
H1_mix_00008491	chr1	-	827	3	FSM	ENSG00000220785.8	ENST00000690395.1	902	3	72	3	5	0	multi-exon	FALSE	canonical	2	5	junction_2	23.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTTGCTGGGGTGTCAG	1465	False	NA	-2	True	AATAAA	-18	NA	32240242	32231659	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32231970_32232041_32232185_32239868
H1_mix_00008492	chr1	-	1269	4	FSM	ENSG00000220785.8	ENST00000688352.1	1284	4	15	0	3	0	multi-exon	FALSE	canonical	3	19	junction_2	13.490737563232	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTTGCTGGGGTGTCAG	1433	False	NA	-2	True	AATAAA	-18	NA	32240274	32231659	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32231970_32232041_32232185_32234703_32235114_32239868
H1_mix_00008493	chr1	-	1288	6	FSM	ENSG00000220785.8	ENST00000690989.1	2666	6	1375	3	-8	0	multi-exon	FALSE	canonical	2	2	junction_4	17.5772580341759	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTTGCTGGGGTGTCAG	1408	False	NA	-2	True	AATAAA	-18	NA	32240299	32231659	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32231970_32232041_32232185_32234703_32234815_32234951_32235114_32239294_32239426_32239868
H1_mix_00008495	chr1	-	581	8	NNC	ENSG00000176261.16	novel	1567	7	NA	NA	0	1949	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	330.915366206885	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGAAAGCTAATACAGTC	-7	True	NA	NA	False	NA	NA	NA	32650549	32598222	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_32598251_32621832_32621949_32627507_32627545_32631826_32631880_32633644_32633728_32633950_32634073_32634767_32634793_32650432
H1_mix_00008496	chr1	-	594	7	NNC	ENSG00000176261.16	novel	598	7	NA	NA	0	1949	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	426.909436141515	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGAAAGCTAATACAGTC	-7	True	NA	NA	False	NA	NA	NA	32650549	32598222	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_32598251_32621832_32621949_32627507_32627545_32633644_32633728_32633950_32634073_32634701_32634793_32650432
H1_mix_00008497	chr1	-	1578	7	NIC	ENSG00000176261.16	novel	1567	7	NA	NA	5	3	combination_of_known_junctions	FALSE	canonical	3	134	junction_5	315.519369012779	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTATTGTTGTTTTTGTTT	708	False	NA	0	True	AATAAA	-22	NA	32650520	32620816	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_32621949_32627507_32627545_32631826_32631880_32633644_32633728_32633950_32634111_32634767_32634793_32650432
H1_mix_00008498	chr1	-	515	6	NIC	ENSG00000176261.16	novel	620	7	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	134	junction_4	357.493832114625	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTTGTTTTCCTCTTC	705	False	NA	-20	True	AATAAA	-17	NA	32650523	32621829	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_32621949_32627507_32627545_32633644_32633728_32633950_32634111_32634767_32634793_32650432
H1_mix_00008500	chr1	-	1563	2	FSM	ENSG00000160097.20	ENST00000481487.1	1563	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCTTGTCTTCTGGTAAA	7772	False	NA	-1	True	AATAAA	-19	NA	32864717	32862267	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_32863777_32864663
H1_mix_00008502	chr1	-	4987	5	FSM	ENSG00000004455.17	ENST00000354858.11	5059	5	72	0	-21	0	multi-exon	FALSE	canonical	3	47	junction_4	504.604981644058	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTGGGTGAGCTATTGT	-1	True	NA	-17	True	AATAAA	-6	NA	33036932	33008891	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33036735
H1_mix_00008503	chr1	-	4402	14	ISM	ENSG00000121904.19	ENST00000373381.9	13655	71	622375	-21	29735	21	3prime_fragment	FALSE	canonical	2	3	junction_12	2.35841687950091	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGGGCAAGTGTTTGTTG	NA	False	NA	21	True	TATAAA	-44	NA	33542855	33513976	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_33516571_33519464_33519678_33519811_33519951_33521462_33521551_33523306_33523420_33524881_33525044_33527195_33527259_33533049_33533230_33533795_33533908_33537021_33537096_33537435_33537610_33540524_33540699_33541129_33541310_33542719
H1_mix_00008504	chr1	-	3003	13	ISM	ENSG00000121904.19	ENST00000373381.9	13655	71	13	257534	13	576	5prime_fragment	FALSE	canonical	2	11	junction_11	8.37655458208604	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTTTGATGACTTTTGA	164	False	NA	-12	True	AATGAA	-26	NA	34165217	33771531	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_33772752_33788599_33788713_33792422_33792527_33810742_33810865_33819712_33819838_33820468_33820557_33825696_33825775_33846883_33846997_33918093_33918302_33935759_33935955_34032593_34032707_34088976_34089194_34164910
H1_mix_00008505	chr1	-	4830	15	NIC	ENSG00000163867.17	novel	5122	16	NA	NA	-8	0	combination_of_known_splicesites	TRUE	canonical	1	1	junction_12	25.9910698949796	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAATTTCATATAATTTT	4	True	NA	-4	True	AATAAA	-22	NA	35031719	34986164	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_34988936_34992233_34992388_35003967_35004006_35005131_35005273_35006950_35007099_35008751_35008925_35010446_35010598_35010757_35011037_35011889_35012006_35012430_35012582_35014696_35014889_35014987_35015163_35020382_35020468_35030546_35030714_35031630
H1_mix_00008507	chr1	-	695	4	FSM	ENSG00000116560.11	ENST00000485365.1	693	4	0	-2	0	0	multi-exon	FALSE	canonical	3	96	junction_3	218.493834136242	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTTTTGTTTTTGTTT	9914	False	NA	-14	True	AATAAA	-19	NA	35181606	35176377	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_35176472_35177318_35177400_35177988_35178037_35181134
H1_mix_00008508	chr1	-	5755	13	NIC	ENSG00000116560.11	novel	3740	10	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	96	junction_3	702.800879615904	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTTTTGTTTTTGTTT	11	False	NA	-14	True	AATAAA	-19	NA	35193133	35176377	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_35176475_35177318_35177400_35177988_35178037_35181134_35184594_35187000_35187123_35187202_35187252_35187972_35188091_35189002_35189088_35189185_35189383_35190497_35190594_35190693_35190996_35191340_35191530_35192221
H1_mix_00008509	chr1	-	1016	1	Genic_Genomic	ENSG00000142687.18	novel	NA	NA	NA	NA	4433	735	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATCTGCTGGTGAGGATC	8615	False	NA	NA	False	NA	NA	NA	35438822	35437806	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_-_35437800_35438800
H1_mix_00008510	chr1	-	295	2	FSM	ENSG00000142687.18	ENST00000474856.1	295	2	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACTATTACCATGAAAGAG	6515	False	NA	NA	False	NA	NA	NA	35448199	35444035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_35444304_35448172
H1_mix_00008511	chr1	-	3716	8	NNC	ENSG00000163875.16	novel	1408	8	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	139.028113439443	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACTGCTGATAATTGTT	6	True	NA	NA	False	AATAAA	-14	NA	37514756	37489993	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_37491296_37492270_37494108_37495884_37495919_37501803_37501997_37509277_37509324_37509454_37509543_37513422_37513539_37514656
H1_mix_00008512	chr1	-	2147	8	FSM	ENSG00000163875.16	ENST00000373075.6	2147	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	178.552913325834	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTGACTCT	-1	True	NA	-5	True	AATAAA	-18	NA	37514763	37492574	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_37494108_37495884_37495919_37496706_37496737_37501803_37501997_37509277_37509324_37509454_37509543_37513422_37513539_37514656
H1_mix_00008515	chr1	-	2630	5	NIC	ENSG00000116922.15	novel	2696	5	NA	NA	22	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_4	99.497173326683	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGTGTCAAGTCTTATG	1792	False	NA	-1	True	AATAAA	-13	NA	37690460	37681569	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_37683161_37683318_37683438_37686272_37686453_37689605_37689887_37690001
H1_mix_00008516	chr1	-	589	1	FSM	ENSG00000116922.15	ENST00000609516.1	2622	1	-25	2058	-25	-310	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGCACAAAGCCATGTTA	8035	False	NA	NA	False	NA	NA	NA	37684217	37683628	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_37683600_37684200
H1_mix_00008517	chr1	-	2774	18	NNC	ENSG00000183431.12	novel	2774	17	NA	NA	0	24616	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	384.757057218688	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAAATTGGGATAAT	19	True	NA	NA	False	AAAAAG	-5	NA	37989995	37932358	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_37932387_37956975_37958264_37960119_37960176_37968043_37968135_37969353_37969465_37969570_37969736_37976883_37976954_37978719_37978828_37978987_37979056_37979464_37979534_37980585_37980725_37981728_37981812_37984168_37984261_37984706_37984780_37987572_37987679_37987783_37987837_37989547_37989596_37989869
H1_mix_00008518	chr1	-	4289	18	NNC	ENSG00000183431.12	novel	2774	17	NA	NA	-1434	24616	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	384.757057218688	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAAATTGGGATAAT	7918	False	NA	NA	False	AAAAAG	-5	NA	37991509	37932358	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_37932387_37956974_37958264_37960119_37960176_37968043_37968135_37969353_37969465_37969570_37969736_37976883_37976954_37978719_37978828_37978987_37979056_37979464_37979534_37980585_37980725_37981728_37981812_37984168_37984261_37984706_37984780_37987572_37987679_37987783_37987837_37989547_37989596_37989869
H1_mix_00008520	chr1	-	1468	5	FSM	ENSG00000183386.10	ENST00000485803.5	1468	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	82.7477341079501	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGGGCCTCCGTGTGTGT	1	True	NA	-9	True	AATAAA	-14	NA	38005502	37996769	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_37997560_37997683_37997871_37997962_37998133_37998973_37999149_38005356
H1_mix_00008521	chr1	-	349	2	Intergenic	novelGene_27	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTAGCTTGGGCTCAGA	NA	False	NA	NA	False	NA	NA	NA	38430746	38425142	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_-_38425317_38430571
H1_mix_00008526	chr1	-	898	3	FSM	ENSG00000090621.15	ENST00000451091.2	898	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	206.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAACATTGATTAAATGAT	-1	True	NA	NA	False	NA	NA	NA	39576790	39572392	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_39572587_39575758_39576224_39576551
H1_mix_00008527	chr1	-	4809	7	FSM	ENSG00000116985.12	ENST00000372827.8	4826	7	17	0	17	0	multi-exon	FALSE	canonical	0	0	junction_3	0.942809041582063	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGATGATGTATTTATTTC	-4	True	NA	NA	False	ATTAAA	-18	NA	39788848	39757181	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_39760569_39763091_39763203_39763711_39763792_39764622_39764818_39774307_39774457_39774848_39775039_39788151
H1_mix_00008528	chr1	-	1923	10	NNC	ENSG00000043514.17	novel	5051	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	28	junction_7	42.8381968704463	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCATGCCTAGTTTATACA	66	False	NA	2	True	AAAAAG	-9	NA	39883434	39841021	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_39841914_39844100_39844219_39844530_39844641_39847219_39847298_39847547_39847661_39847985_39848098_39850118_39850262_39853969_39854067_39857274_39857418_39883317
H1_mix_00008530	chr1	-	2309	10	NNC	ENSG00000131238.18	novel	2388	10	NA	NA	0	50360	intron_retention	FALSE	non_canonical	0	0	junction_1	552.310589844447	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTTCTTCCTTTGAAAA	-3	True	NA	NA	False	NA	NA	NA	40097250	40022349	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_40022378_40072712_40074184_40076841_40076914_40078559_40078659_40080396_40080488_40089409_40089513_40091328_40091400_40092044_40092173_40092397_40092508_40097114
H1_mix_00008531	chr1	-	1468	1	FSM	ENSG00000231296.1	ENST00000447743.1	313	1	-140	-1015	-140	1015	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGCTGATTACATGCCA	NA	False	NA	NA	False	AATAAA	-8	NA	40263124	40261656	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_40261700_40263100
H1_mix_00008532	chr1	-	5614	31	NNC	ENSG00000049089.15	novel	2852	32	NA	NA	0	3	intron_retention	FALSE	canonical	3	44	junction_14	100.314998324722	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGTTGTTGGGCTTCTCT	17	True	NA	-3	True	NA	NA	NA	40317267	40300485	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_40301382_40301811_40301890_40302620_40302810_40303130_40303186_40303529_40303677_40303806_40303840_40303927_40303973_40304063_40304100_40304319_40304392_40304475_40304530_40304793_40304848_40305714_40305769_40306142_40306188_40306283_40306402_40307445_40307500_40307702_40307757_40308191_40308246_40309937_40309992_40310110_40310165_40310263_40310318_40310713_40310768_40311092_40311147_40311229_40311287_40311499_40311548_40311661_40311716_40312058_40312113_40312455_40312480_40312573_40312610_40312730_40312785_40314204_40314268_40314351
H1_mix_00008534	chr1	-	365	2	Fusion	ENSG00000237899.1_ENSG00000272145.1	novel	471	5	NA	NA	72	3103	multi-exon	FALSE	canonical	3	11	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTCACGTTGTGCATCCA	85	False	NA	NA	False	NA	NA	NA	40691994	40687276	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_-_40687603_40691955
H1_mix_00008535	chr1	-	1687	1	FSM	ENSG00000272145.1	ENST00000606277.1	1687	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAAAAAAAGTTACTT	13	True	NA	NA	False	NA	NA	NA	40692066	40690379	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_40690400_40692100
H1_mix_00008536	chr1	-	3324	16	FSM	ENSG00000010803.16	ENST00000372596.5	3323	16	0	-1	0	1	multi-exon	FALSE	canonical	3	18	junction_11	23.6693895147298	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTCTTTTTAATCAGTT	12	True	NA	-12	True	AATAAA	-16	NA	41242116	41027200	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_41028320_41028583_41028727_41037361_41037542_41046406_41046599_41048689_41048891_41070594_41070722_41075218_41075452_41113282_41113527_41116921_41117011_41142877_41143113_41151613_41151685_41159724_41159934_41160874_41160899_41161363_41161433_41186120_41186251_41242058
H1_mix_00008537	chr1	-	3253	15	FSM	ENSG00000010803.16	ENST00000372597.5	3252	15	0	-1	0	1	multi-exon	FALSE	canonical	2	15	junction_10	24.8793004692	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTCTTTTTAATCAGTT	12	True	NA	-12	True	AATAAA	-16	NA	41242116	41027200	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_41028320_41028583_41028727_41037361_41037542_41046406_41046599_41048689_41048891_41070594_41070722_41075218_41075452_41113282_41113527_41116921_41117011_41142877_41143113_41159724_41159934_41160874_41160899_41161363_41161433_41186120_41186251_41242058
H1_mix_00008538	chr1	-	3174	16	NIC	ENSG00000010803.16	novel	3108	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	20	junction_12	19.1724339149265	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGTCTTTTTAATCAGT	18	True	NA	-13	True	AATAAA	-15	NA	41242110	41027201	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_41028320_41028583_41028727_41033982_41034049_41037361_41037542_41046406_41046599_41048689_41048891_41070594_41070722_41075218_41075452_41113282_41113527_41116921_41117011_41142877_41143113_41151613_41151685_41160874_41160899_41161363_41161433_41186120_41186251_41242058
H1_mix_00008539	chr1	-	3513	18	NIC	ENSG00000010803.16	novel	3323	16	NA	NA	7	-4	intron_retention	FALSE	canonical	3	21	junction_13	20.6652341654816	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATACCAGTGTCTTTTTA	207	False	NA	-19	True	AATAAA	-9	NA	41242103	41027207	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_41028320_41028583_41028727_41033982_41034049_41037361_41037542_41046406_41046599_41048689_41048891_41070594_41070722_41075218_41075452_41113282_41113527_41116921_41117011_41142877_41143113_41151613_41151685_41152598_41152742_41159724_41159934_41160874_41160899_41161363_41161433_41186120_41186251_41242058
H1_mix_00008540	chr1	-	4734	11	NIC	ENSG00000198815.9	novel	5225	13	NA	NA	44	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_9	57.0469981681771	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACAACACTGATTGGTCT	-1	True	NA	-12	True	AATAAA	-19	NA	42335171	42176547	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_42179826_42181916_42182025_42188736_42188929_42189302_42189405_42191302_42191720_42194889_42195065_42199101_42199231_42227882_42227967_42265114_42265190_42311049_42311111_42335058
H1_mix_00008542	chr1	-	2733	8	FSM	ENSG00000117394.24	ENST00000676254.1	2795	8	67	-5	67	0	multi-exon	FALSE	canonical	3	478	junction_7	62.5733854879898	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTTTTAGAAACATGGTT	NA	False	NA	-35	True	TATAAA	-5	NA	42931702	42926168	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_42927242_42927604_42927809_42928931_42929034_42929209_42929315_42929592_42929781_42929872_42930036_42930625_42930867_42931045
H1_mix_00008544	chr1	-	541	2	FSM	ENSG00000117394.24	ENST00000460369.3	541	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGTTTTGACAGTTTGG	2216	False	NA	NA	False	AATAAA	-13	NA	42958859	42951615	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_42951931_42958633
H1_mix_00008545	chr1	-	1411	3	FSM	ENSG00000253313.6	ENST00000423420.1	629	3	4	-786	4	2	multi-exon	FALSE	canonical	1	2	junction_2	54.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCACTCATTTTTATTTTT	0	True	NA	-14	True	AATAAA	-32	NA	43285613	43281874	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_43283108_43283251_43283369_43285552
H1_mix_00008546	chr1	-	1186	7	FSM	ENSG00000159479.17	ENST00000372455.4	1186	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	89.6314986796247	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTTCTCCCCACCACCC	6	True	NA	-19	True	AATAAA	-15	NA	43389784	43384725	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_43385107_43385977_43386227_43386588_43386671_43386857_43386999_43387502_43387630_43388309_43388490_43389758
H1_mix_00008547	chr1	-	1676	5	NIC	ENSG00000142959.5	novel	2512	9	NA	NA	1953	0	intron_retention	FALSE	canonical	1	1	junction_4	9.73075022801428	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGTTTAGTTTTTGTTT	1952	False	NA	-6	True	AATATA	-18	NA	44786217	44783584	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_44784484_44784628_44784986_44785107_44785306_44785598_44785677_44786073
H1_mix_00008548	chr1	-	1705	16	NIC	ENSG00000132781.20	novel	1744	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	22	junction_14	64.9244347085304	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTTGTATTTTTTTG	9	True	NA	-4	True	AGTAAA	-20	NA	45340011	45329241	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333595_45334390_45334512_45339975
H1_mix_00008551	chr1	-	2169	1	Genic_Genomic	ENSG00000070759.17	novel	NA	NA	NA	NA	58614	1894	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTCCATCTCAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45399007	45396838	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_-_45396800_45399000
H1_mix_00008552	chr1	-	1173	6	NNC	ENSG00000117450.15	novel	1296	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	3792.74499010941	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAGGAAGCATATTATT	2129	False	NA	-20	True	ATTAAA	-28	NA	45523047	45511035	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_45511415_45514506_45514636_45514871_45514996_45515653_45515808_45518937_45519055_45522777
H1_mix_00008553	chr1	-	1558	5	NIC	ENSG00000117450.15	novel	1296	6	NA	NA	-149	0	intron_retention	FALSE	canonical	3	652	junction_4	3206.45578286993	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAGGAAGCATATTATT	1980	False	NA	-20	True	ATTAAA	-28	NA	45523196	45511035	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_45511415_45514506_45514996_45515653_45515808_45518937_45519055_45522777
H1_mix_00008555	chr1	-	3582	12	NIC	ENSG00000159592.11	novel	3599	12	NA	NA	26	-7	combination_of_known_junctions	FALSE	canonical	3	137	junction_11	166.491307196204	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCAAGTTTTTTTTTTTT	-7	True	NA	-24	True	AATAAA	-20	NA	45687107	45627310	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_45628409_45629575_45629679_45630481_45630607_45633488_45633648_45634095_45634237_45640209_45640404_45642426_45642500_45654542_45654830_45655189_45655320_45659027_45659143_45660183_45661226_45686992
H1_mix_00008556	chr1	-	781	1	FSM	ENSG00000234329.1	ENST00000437848.1	788	1	-69	76	-69	-76	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCAATGTCCTGGGTCCCA	8933	False	NA	NA	False	NA	NA	NA	45651895	45651114	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_45651100_45651900
H1_mix_00008558	chr1	-	4455	8	FSM	ENSG00000132128.18	ENST00000472710.2	4455	8	0	0	0	0	multi-exon	FALSE	canonical	3	534	junction_5	32.3261440916905	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATGCAGCCCTTCTTGAT	3719	False	NA	-27	True	AATAAA	-13	NA	46299890	46278403	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_46279085_46279181_46279615_46280191_46280291_46280395_46280561_46281124_46281386_46285361_46286500_46297562_46297634_46298283
H1_mix_00008559	chr1	-	444	2	Intergenic	novelGene_37	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACCCCTGGACCAGCCTG	NA	False	NA	NA	False	NA	NA	NA	46393630	46386281	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_-_46386354_46393258
H1_mix_00008560	chr1	-	1025	2	FSM	ENSG00000282881.2	ENST00000634804.2	1633	2	0	608	0	-608	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAAGAAGGGAGCAGCAG	5787	False	NA	NA	False	NA	NA	NA	46543969	46532773	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_46533651_46543821
H1_mix_00008561	chr1	-	2590	12	NIC	ENSG00000079277.22	novel	2661	13	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	43.4444644069104	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGGTGGTCCTTTTTTT	8	True	NA	-2	True	AATAAA	-22	NA	46604243	46557408	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_46558801_46561477_46561643_46562648_46562844_46565040_46565137_46568442_46568499_46572062_46572168_46574946_46575021_46576574_46576655_46580529_46580628_46583227_46583330_46594112_46594281_46604184
H1_mix_00008562	chr1	-	3466	4	NNC	ENSG00000123472.12	novel	4158	9	NA	NA	0	68271	intron_retention	FALSE	non_canonical	0	0	junction_1	350.491401067447	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAAAAACACAGGCTG	NA	False	NA	NA	False	NA	NA	NA	46645256	46564465	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_46564494_46632736_46635971_46643193_46643302_46645160
H1_mix_00008564	chr1	-	4560	17	NIC	ENSG00000123473.17	novel	3901	19	NA	NA	12	-1	intron_retention	FALSE	canonical	3	28	junction_2	30.5818573667461	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTTGTCTGTTATAGT	-13	True	NA	-7	True	AATAAA	-21	NA	47314135	47250139	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_47251923_47262902_47263063_47269634_47269867_47272075_47272242_47280240_47281210_47282344_47282460_47287550_47287661_47289434_47289586_47293457_47293545_47295764_47295849_47299904_47299969_47300109_47300153_47301560_47301749_47302233_47302347_47304888_47304997_47310275_47310363_47314035
H1_mix_00008565	chr1	-	4865	18	ISM	ENSG00000123473.17	ENST00000337817.10	5351	19	757	-33	12	-1	3prime_fragment	FALSE	canonical	3	28	junction_3	25.9507118662819	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTTGTCTGTTATAGT	-13	True	NA	-7	True	AATAAA	-21	NA	47314135	47250139	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_47251923_47260288_47260540_47262902_47263117_47269634_47269867_47272075_47272242_47280240_47281210_47282344_47282460_47287550_47287661_47289434_47289586_47293457_47293545_47295764_47295849_47299904_47299969_47300109_47300153_47301560_47301749_47302233_47302347_47304888_47304997_47310275_47310363_47314035
H1_mix_00008567	chr1	-	2210	1	FSM	ENSG00000272491.1	ENST00000606809.1	1674	1	-151	-385	-151	385	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACACACACATGCACTCAC	NA	False	NA	NA	False	NA	NA	NA	48229712	48227502	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_48227500_48229700
H1_mix_00008568	chr1	-	516	6	NNC	ENSG00000186094.18	novel	2989	14	NA	NA	-212099	38294	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.19444229944198	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGCTACTTGAAATCATT	15	False	NA	NA	False	NA	NA	NA	49257813	48779212	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_48779233_48830152_48830207_48867190_48867231_49045583_49045801_49245769_49245865_49257723
H1_mix_00008569	chr1	-	5274	25	NNC	ENSG00000085832.17	novel	5163	25	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_16	39.7761095242972	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGTTATCATGTCGTG	-8	True	NA	-9	True	AATAAA	-20	NA	51519266	51354262	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_51356847_51361170_51361356_51363865_51364029_51365952_51366030_51394380_51394448_51399031_51399166_51400917_51400954_51402434_51402526_51403418_51403533_51405904_51406109_51408134_51408333_51409534_51409697_51421785_51421859_51440346_51440433_51444888_51445046_51446959_51447106_51447934_51448136_51461090_51461151_51463672_51463799_51465260_51465327_51468472_51468569_51471689_51471738_51472858_51472949_51481272_51481315_51519198
H1_mix_00008570	chr1	-	5160	24	NIC	ENSG00000085832.17	novel	5163	25	NA	NA	-87	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_16	40.6157707271207	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGTTATCATGTCGTG	NA	False	NA	-9	True	AATAAA	-20	NA	51519353	51354262	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_51356847_51361170_51361356_51363865_51364029_51365952_51366030_51394380_51394448_51399031_51399166_51400917_51400954_51402434_51402526_51403418_51403533_51405904_51406109_51408134_51408333_51409534_51409697_51421785_51421859_51440346_51440433_51444888_51445046_51446959_51447106_51461090_51461151_51463672_51463799_51465260_51465327_51468472_51468569_51471689_51471738_51472858_51472949_51481272_51481315_51519198
H1_mix_00008571	chr1	-	1756	9	FSM	ENSG00000085832.17	ENST00000371727.5	1773	9	0	17	0	-17	multi-exon	FALSE	canonical	0	0	junction_1	52.7528139059899	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATTCCAGAATCTGGAAA	13	True	NA	NA	False	CATAAA	-44	NA	51519245	51457552	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_51458734_51461090_51461151_51463672_51463799_51465260_51465327_51468472_51468569_51471689_51471738_51472858_51472949_51481272_51481315_51519198
H1_mix_00008572	chr1	-	3681	32	NNC	ENSG00000078618.23	novel	3895	33	NA	NA	0	21254	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	256.429388365456	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGTCTTTAATTCTCTTT	33	False	NA	NA	False	NA	NA	NA	51878771	51767936	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_51767962_51789191_51789434_51789567_51789658_51790532_51790650_51790899_51790991_51791577_51791662_51792045_51792099_51792376_51792425_51794471_51794611_51794822_51794855_51798248_51798412_51800555_51800684_51803813_51803965_51805509_51805562_51806793_51806914_51809314_51809402_51810280_51810405_51811993_51812099_51814034_51814090_51814550_51814610_51814692_51814814_51816311_51816390_51818065_51818136_51819799_51819874_51821497_51821556_51823663_51823787_51825286_51825383_51827795_51827870_51834016_51834171_51836130_51836213_51840225_51840515_51878274
H1_mix_00008575	chr1	-	426	1	FSM	ENSG00000228407.2	ENST00000414059.2	340	1	-39	-47	-39	47	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTTAACAGGCAGGGAGAA	2840	False	NA	NA	False	AATAAA	-29	NA	52160639	52160213	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_52160200_52160600
H1_mix_00008577	chr1	-	2968	16	NIC	ENSG00000085840.13	novel	3121	17	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_5	69.0949748936604	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTGTGAAGTTATTACA	90	False	NA	-1	True	ATTAAA	-19	NA	52404378	52372828	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_52373376_52374809_52374898_52375429_52375600_52381641_52381762_52383419_52383570_52384549_52384722_52385160_52385263_52385851_52385950_52388441_52388638_52389216_52389322_52393442_52393804_52396045_52396365_52397684_52397864_52401361_52401490_52402128_52402229_52404245
H1_mix_00008578	chr1	-	5027	29	NIC	ENSG00000134744.14	novel	5853	30	NA	NA	0	-5	intron_retention	FALSE	canonical	2	5	junction_28	58.3462133496673	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATTTGGTTAATCTGTT	6	True	NA	-12	True	AATAAA	-16	NA	52553082	52423279	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_52424003_52425348_52425508_52431012_52431461_52435364_52435466_52436754_52436979_52438219_52438336_52445786_52445870_52445956_52446005_52446264_52446443_52446589_52446668_52458335_52458450_52461133_52461224_52461512_52461617_52461711_52461770_52465069_52465174_52468180_52468268_52471951_52472103_52474831_52475536_52477707_52477883_52481422_52481636_52481803_52481924_52488908_52489036_52490731_52490802_52493610_52493663_52495426_52495516_52497005_52497184_52509595_52509713_52515890_52516055_52552930
H1_mix_00008579	chr1	-	5709	29	NIC	ENSG00000134744.14	novel	5853	30	NA	NA	0	-5	intron_retention	FALSE	canonical	3	17	junction_10	53.761128416091	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATTTGGTTAATCTGTT	6	True	NA	-12	True	AATAAA	-16	NA	52553082	52423279	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_52424003_52425348_52425508_52431012_52431461_52435364_52435466_52436754_52436964_52438219_52438336_52445786_52445870_52445956_52446005_52446264_52446443_52446589_52446668_52461133_52461224_52461512_52461617_52461711_52461770_52465069_52465174_52468180_52468268_52471951_52472103_52474831_52475536_52477707_52477883_52481422_52481636_52481803_52481924_52488908_52489036_52490731_52490802_52493610_52493663_52495426_52495516_52497005_52497184_52509595_52509713_52515890_52516055_52525562_52526374_52552930
H1_mix_00008580	chr1	-	5721	29	NIC	ENSG00000134744.14	novel	5853	30	NA	NA	0	-5	intron_retention	FALSE	canonical	3	16	junction_26	57.059492762254	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATTTGGTTAATCTGTT	6	True	NA	-12	True	AATAAA	-16	NA	52553082	52423279	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_52424003_52425348_52425508_52431012_52431461_52435364_52435466_52436754_52436979_52438219_52438336_52445786_52445870_52445956_52446005_52446264_52446443_52446589_52446668_52458335_52458450_52461133_52461224_52461512_52461617_52461711_52461770_52465069_52465174_52468180_52468268_52471951_52472103_52474831_52475536_52477707_52477883_52481422_52481636_52481803_52481924_52488908_52489036_52490731_52490802_52493610_52493663_52495426_52495516_52497005_52497184_52515890_52516055_52525562_52526374_52552930
H1_mix_00008581	chr1	-	4817	29	NIC	ENSG00000134744.14	novel	5853	30	NA	NA	208	-6	intron_retention	FALSE	canonical	3	62	junction_1	51.4952940191863	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACATGAAGATTCAGATTT	546	False	NA	-14	True	AATAAA	-10	NA	52525722	52423408	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_52423914_52425348_52425508_52431012_52431461_52435364_52435466_52436754_52436979_52438219_52438336_52445786_52445870_52445956_52446005_52446264_52446443_52446589_52446668_52458335_52458450_52461133_52461224_52461512_52461617_52461711_52461770_52465069_52465174_52468180_52468268_52471951_52472103_52474831_52475536_52477707_52477883_52481422_52481636_52481803_52481924_52488908_52489036_52490731_52490802_52493610_52493663_52495426_52495516_52497005_52497184_52509595_52509713_52515890_52516055_52525562
H1_mix_00008582	chr1	-	5481	29	NIC	ENSG00000134744.14	novel	5853	30	NA	NA	0	-6	intron_retention	FALSE	canonical	3	32	junction_19	51.2098897296455	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACATGAAGATTCAGATTT	6	True	NA	-14	True	AATAAA	-10	NA	52553082	52423408	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_52424003_52425348_52425508_52431012_52431461_52435364_52435466_52436754_52436964_52438219_52438336_52445786_52445870_52445956_52446005_52446264_52446443_52446589_52446668_52458335_52458450_52461133_52461224_52461512_52461617_52461711_52461770_52465069_52465174_52468180_52468268_52471951_52472103_52474831_52475536_52477707_52477883_52481803_52481924_52488908_52489036_52490731_52490802_52493610_52493663_52495426_52495516_52497005_52497184_52509595_52509713_52515890_52516055_52525562_52526374_52552930
H1_mix_00008588	chr1	-	536	1	FSM	ENSG00000236360.2	ENST00000414168.1	502	1	6	-40	6	40	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCATCTTCTCTTCCT	NA	False	NA	NA	False	NA	NA	NA	52993696	52993160	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_52993200_52993700
H1_mix_00008590	chr1	-	3848	16	NIC	ENSG00000157193.18	novel	3770	17	NA	NA	-13	-1	intron_retention	FALSE	canonical	2	10	junction_10	76.3126900762034	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATAGATGTTCTTCATTA	2	True	NA	-5	True	AATAAA	-20	NA	53328083	53245542	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_53247057_53250689_53250863_53255116_53255186_53257239_53257465_53258318_53258472_53260463_53260606_53262067_53262208_53262445_53262565_53264168_53264397_53266472_53266648_53271226_53271347_53275630_53275754_53280586_53280716_53289566_53289690_53326872_53326993_53327788
H1_mix_00008591	chr1	-	784	5	FSM	ENSG00000058804.12	ENST00000480952.1	785	5	0	1	0	-1	multi-exon	FALSE	canonical	3	37	junction_4	231.143218589687	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAATTTCTGCTTTTTG	97	False	NA	NA	False	NA	NA	NA	53838463	53818970	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_53819080_53825797_53825937_53827998_53828174_53832489_53832592_53838204
H1_mix_00008592	chr1	-	800	6	NIC	ENSG00000215883.11	novel	5643	8	NA	NA	13	-13	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	14.00856880627	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTCTGTGCCAGGCTCTG	18	True	NA	-16	True	ATTAAA	-4	NA	54199997	54186165	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_54186287_54187651_54187740_54190747_54190897_54195418_54195716_54196368_54196492_54199975
H1_mix_00008593	chr1	-	4079	10	NNC	ENSG00000116133.13	novel	4314	10	NA	NA	-111	27745	intron_retention	FALSE	non_canonical	0	0	junction_1	816.345106761432	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGGCATCTAAATTAGAA	222	False	NA	NA	False	AAAAAG	-5	NA	54887007	54821881	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_54821917_54849627_54852387_54853433_54853613_54854036_54854235_54865302_54865447_54871349_54871614_54875092_54875212_54875941_54876048_54883617_54883774_54886888
H1_mix_00008594	chr1	-	584	5	FSM	ENSG00000116133.13	ENST00000648182.1	584	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1094.9125535859	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGTTCTATGCCGTACC	421	False	NA	NA	False	NA	NA	NA	54886808	54871601	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_54871614_54875092_54875212_54875941_54876048_54883617_54883774_54886617
H1_mix_00008595	chr1	-	409	2	Intergenic	novelGene_40	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	488	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGACGTCTCTAAGCGA	NA	False	NA	NA	False	NA	NA	NA	55028327	55022707	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_-_55023012_55028222
H1_mix_00008596	chr1	-	5366	17	NIC	ENSG00000173406.16	novel	5301	15	NA	NA	31	0	combination_of_known_junctions	TRUE	canonical	3	20	junction_7	32.1062688582775	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTAGCCTGGCTTTATTCT	22	True	NA	1	True	AATAAA	-18	NA	57424026	56994777	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_56998129_57010679_57010791_57011144_57011273_57014882_57015432_57023530_57023640_57025980_57026044_57033385_57033434_57033522_57033574_57062883_57062944_57069359_57069426_57071022_57071062_57071521_57071642_57072282_57072415_57136542_57136642_57145289_57145430_57290963_57291167_57423929
H1_mix_00008597	chr1	-	5281	13	NNC	ENSG00000173406.16	novel	5301	15	NA	NA	-349	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_12	28.9802375191555	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTAGCCTGGCTTTATTCT	NA	False	NA	1	True	AATAAA	-18	NA	57424409	56994777	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_56998129_57010679_57010791_57011144_57011273_57014882_57015432_57023530_57023640_57025980_57026044_57062883_57062944_57071521_57071642_57072282_57072415_57136542_57136642_57145289_57145430_57290963_57291167_57424193
H1_mix_00008598	chr1	-	442	2	Genic_Genomic	ENSG00000223416.3	novel	348	1	NA	NA	0	10197	multi-exon	FALSE	non_canonical	0	0	junction_1	0	542	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATAATCTTGCCCAAATC	23	False	NA	NA	False	GATAAA	-32	NA	58056480	58045935	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_-_58045955_58056057
H1_mix_00008599	chr1	-	2617	9	NIC	ENSG00000162600.12	novel	1861	9	NA	NA	0	763	combination_of_known_junctions	FALSE	canonical	3	16	junction_8	30.797727188869	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAAGAGGAAAGGGACTA	23	True	NA	NA	False	AATAAA	-15	NA	58546706	58479955	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_58481175_58506059_58506210_58527260_58527336_58530600_58530730_58533952_58534061_58534157_58534332_58536512_58536742_58538794_58539311_58546689
H1_mix_00008600	chr1	-	1880	9	NIC	ENSG00000162600.12	novel	1861	9	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	35.7561183575623	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTTCTACTTGCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	58546783	58480718	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_58481175_58506059_58506210_58527260_58527336_58530600_58530730_58533952_58534061_58534157_58534332_58536512_58536742_58538794_58539311_58546740
H1_mix_00008601	chr1	-	7219	7	ISM	ENSG00000162601.11	ENST00000493821.6	7794	16	19786	4	-1393	0	intron_retention	FALSE	canonical	3	160	junction_6	35.5469173534546	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATCATTTGGATTATTTC	NA	False	NA	-21	True	AATAAA	-15	NA	58669876	58654742	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_58660156_58661169_58661228_58661405_58661512_58665498_58665632_58667037_58667227_58667846_58667922_58668631
H1_mix_00008602	chr1	-	7967	15	ISM	ENSG00000162601.11	ENST00000493821.6	7794	16	0	4	0	0	intron_retention	FALSE	canonical	3	133	junction_7	38.760712804886	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATCATTTGGATTATTTC	NA	False	NA	-21	True	AATAAA	-15	NA	58689662	58654742	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_58660156_58661169_58661228_58661405_58661512_58665498_58665632_58667037_58667227_58667846_58667922_58668631_58668683_58668983_58669039_58671869_58671959_58673572_58673651_58675476_58675581_58676925_58677057_58681784_58682546_58685152_58685252_58689037
H1_mix_00008603	chr1	-	7827	20	NNC	ENSG00000162601.11	novel	7192	20	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	72.8378459357086	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATCATTTGGATTATTTC	8	True	NA	-21	True	AATAAA	-15	NA	58700057	58654742	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_58660156_58661169_58661228_58661405_58661512_58665498_58665632_58667037_58667227_58667846_58667922_58668429_58668567_58668983_58669039_58671869_58671959_58673572_58673651_58675476_58675576_58676925_58677057_58681784_58682546_58685152_58685252_58689037_58689117_58690225_58690250_58690339_58690418_58692860_58692932_58695128_58695208_58699984
H1_mix_00008604	chr1	-	7743	20	NNC	ENSG00000162601.11	novel	7751	20	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_2	45.6981545539849	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATCATTTGGATTATTTC	8	True	NA	-21	True	AATAAA	-15	NA	58700057	58654742	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_58660156_58661169_58661225_58661405_58661512_58665498_58665632_58667037_58667227_58667846_58667922_58668631_58668683_58668983_58669039_58671869_58671959_58673572_58673651_58675476_58675581_58676925_58677057_58681784_58682546_58685152_58685252_58689037_58689117_58690225_58690250_58690339_58690418_58692860_58692932_58695128_58695208_58699984
H1_mix_00008606	chr1	-	1259	4	FSM	ENSG00000232453.7	ENST00000634763.1	1266	4	0	7	0	-3	multi-exon	FALSE	canonical	0	0	junction_1	1.88561808316413	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATATTGTGATTGTTTC	NA	False	NA	NA	False	AATAAA	-21	NA	58903747	58882880	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_58883735_58889148_58889209_58895844_58896010_58903567
H1_mix_00008607	chr1	-	1191	4	FSM	ENSG00000226476.7	ENST00000663215.1	1360	4	73	96	48	-89	multi-exon	FALSE	canonical	1	1	junction_2	0.942809041582063	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCAGTCATGCTGACACC	NA	False	NA	NA	False	AAAAAG	-37	NA	60640434	60595605	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_60596374_60600126_60600271_60640010_60640127_60640271
H1_mix_00008608	chr1	-	998	8	NNC	ENSG00000162604.12	novel	969	7	NA	NA	0	15663	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	92.7806278161513	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGGAACTTCGTTGAGTC	-9	True	NA	NA	False	NA	NA	NA	61725144	61665382	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_61665409_61681045_61681351_61683416_61683547_61694696_61694771_61700933_61701026_61709328_61709438_61723712_61723783_61724952
H1_mix_00008609	chr1	-	3044	6	NIC	ENSG00000162604.12	novel	921	8	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	19	junction_5	99.5220578565375	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACATTTTTAGTGCTTTGT	348	False	NA	-11	True	AATAAA	-13	NA	61725114	61681050	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_61683547_61694696_61694771_61700933_61701026_61709328_61709438_61723712_61723773_61724901
H1_mix_00008610	chr1	-	468	1	FSM	ENSG00000271200.1	ENST00000605725.1	427	1	-48	7	-48	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTAAATGTGGGAGTCATT	NA	False	NA	-7	True	AATAAA	-13	NA	61742472	61742004	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_61742000_61742500
H1_mix_00008612	chr1	-	1022	4	NIC	ENSG00000230798.6	novel	1019	4	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	474.745077793218	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	17	True	NA	-53	True	AATAAA	-24	NA	63322436	63320883	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_63321191_63321366_63321464_63321583_63322081_63322315
H1_mix_00008613	chr1	-	619	4	FSM	ENSG00000230798.6	ENST00000689015.1	652	4	27	6	17	0	multi-exon	FALSE	canonical	0	0	junction_1	83.0033466527438	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	17	True	NA	-53	True	AATAAA	-24	NA	63322436	63320883	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_63321191_63321366_63321464_63321850_63321945_63322315
H1_mix_00008614	chr1	-	1026	4	NIC	ENSG00000230798.6	novel	1019	4	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	463.640905107486	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	17	True	NA	-53	True	AATAAA	-24	NA	63322436	63320883	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_63321191_63321362_63321464_63321583_63322081_63322315
H1_mix_00008615	chr1	-	455	3	NNC	ENSG00000230798.6	novel	491	3	NA	NA	-265	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	97.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	NA	False	NA	-53	True	AATAAA	-24	NA	63324706	63320883	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_63321191_63321366_63321464_63324655
H1_mix_00008616	chr1	-	200	1	FSM	ENSG00000236674.1	ENST00000455736.1	1357	1	648	509	648	-509	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCAATACAAGACTGCACAA	NA	False	NA	NA	False	NA	NA	NA	63360531	63360331	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_63360300_63360500
H1_mix_00008617	chr1	-	251	1	FSM	ENSG00000228056.3	ENST00000440942.1	490	1	-108	347	-108	-347	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGGAGACCAAGAAGATCC	NA	False	NA	NA	False	NA	NA	NA	63843793	63843542	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_63843500_63843800
H1_mix_00008618	chr1	-	2933	18	NNC	ENSG00000162434.13	novel	4288	21	NA	NA	0	484	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_15	27.7126880613335	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTCCAGTGGCTTAGCT	2074	False	NA	NA	False	NA	NA	NA	64864856	64833984	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_64834658_64835395_64835507_64836097_64836216_64837931_64838105_64838464_64838590_64839602_64839796_64841244_64841340_64841450_64841602_64844063_64844216_64844753_64844890_64845512_64845641_64846648_64846737_64847531_64847676_64850803_64850911_64855508_64855696_64857655_64857780_64860104_64860263_64864786
H1_mix_00008619	chr1	-	3453	1	FSM	ENSG00000265996.1	ENST00000580455.1	88	1	-588	-2777	-588	2777	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGGATTTAGTTGATT	9348	False	NA	NA	False	AATAAA	-33	NA	65058430	65054977	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_65055000_65058400
H1_mix_00008620	chr1	-	1078	6	FSM	ENSG00000152763.17	ENST00000371022.3	1520	6	0	442	0	-442	multi-exon	FALSE	canonical	1	3	junction_3	1.74355957741627	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTAGTTGGACACTGTGT	-18	True	NA	NA	False	AATAAA	-21	NA	66924846	66871246	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_66871510_66874780_66874938_66891153_66891267_66893228_66893414_66905200_66905376_66924661
H1_mix_00008621	chr1	-	5874	11	ISM	ENSG00000116704.8	ENST00000235345.6	6193	12	1116	24	1116	-24	3prime_fragment	FALSE	canonical	3	15	junction_10	4.92341345003647	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAAAATTCCTTTGTAAC	1350	False	NA	-33	True	AATAAA	-21	NA	67053032	66999373	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_67004449_67009084_67009168_67020368_67020448_67021534_67021603_67042235_67042329_67047264_67047368_67049781_67049851_67050432_67050505_67052011_67052080_67052770_67052858_67052955
H1_mix_00008622	chr1	-	4323	5	NNC	ENSG00000172380.6	novel	4395	4	NA	NA	0	1602	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	141.190252850542	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGACCATCTTTGTGGA	346	False	67833445	NA	False	NA	NA	NA	67833436	67699872	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_67699899_67701541_67705577_67707593_67707713_67777457_67777508_67833343
H1_mix_00008624	chr1	-	2333	4	FSM	ENSG00000050628.21	ENST00000306666.10	2360	4	28	-1	0	1	multi-exon	FALSE	canonical	0	0	junction_1	2.35702260395516	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTTGAGTCATCTAATAG	25	False	NA	NA	False	AATAAA	-25	NA	71047788	70970780	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_70971734_70974296_70974389_71012304_71012485_71046680
H1_mix_00008626	chr1	-	6929	22	NNC	ENSG00000137968.17	novel	4406	24	NA	NA	234659	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	3.89720523154479	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTCTTTTGGTTTCTT	NA	False	NA	NA	False	AATAAA	-20	NA	75376425	75202127	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_75206720_75211467_75211553_75213704_75213794_75213918_75213990_75214604_75214679_75215753_75215858_75217865_75217961_75218489_75218753_75219256_75219345_75219799_75219893_75222360_75222461_75227725_75227858_75233985_75234099_75236986_75237071_75238512_75238637_75242000_75242062_75242885_75243012_75251209_75251295_75274957_75275043_75300611_75300686_75339581_75339631_75376083
H1_mix_00008627	chr1	-	4620	12	NNC	ENSG00000142892.15	novel	4601	11	NA	NA	0	570	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	69.0434047215025	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAGCAAATCACACAATG	-11	True	NA	NA	False	NA	NA	NA	77219429	77088418	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_77088444_77088993_77092491_77122274_77122360_77154448_77154622_77161294_77161406_77161593_77161712_77163845_77163943_77166718_77166831_77169259_77169396_77206639_77206732_77210435_77210490_77219309
H1_mix_00008628	chr1	-	583	4	NNC	ENSG00000142892.15	novel	4601	11	NA	NA	4	-35403	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	129.342783159926	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTAATGTGCTTATTT	-4	True	NA	NA	False	CATAAA	-18	NA	77219422	77189896	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_77190221_77206639_77206732_77210435_77210490_77219309
H1_mix_00008629	chr1	-	688	5	FSM	ENSG00000036549.13	ENST00000476195.5	729	5	41	0	41	0	multi-exon	FALSE	canonical	1	7	junction_4	113.551750316761	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGACTGTTGAAGAACAG	9917	False	NA	NA	False	NA	NA	NA	77585002	77581017	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_77581070_77581775_77581889_77581978_77582127_77584516_77584656_77584766
H1_mix_00008631	chr1	-	4461	25	NNC	ENSG00000077254.14	novel	4502	25	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	canonical	1	3	junction_20	96.8181284677617	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAATGTTGAATTTATTT	18	True	NA	-4	True	AATAAA	-21	NA	77759810	77695986	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_77697475_77697862_77697932_77701368_77701472_77711746_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721926_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739415_77740876_77740940_77741375_77741430_77741616_77741749_77745420_77745600_77759642
H1_mix_00008634	chr1	-	2862	22	NNC	ENSG00000077254.14	novel	2917	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	113.794679247069	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGTAATAGATTTCAAG	17	True	NA	NA	False	AATAAA	-15	NA	77759811	77711651	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77720261_77720403_77721171_77721206_77721830_77721926_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77759642
H1_mix_00008636	chr1	-	2524	20	FSM	ENSG00000162613.17	ENST00000370767.5	2524	20	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	243.360328129873	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCGGTAAGTTGGATA	410	False	NA	-24	True	AATAAA	-15	NA	77979092	77948404	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_77948915_77949154_77949301_77955254_77955330_77956571_77956701_77960183_77960264_77960343_77960496_77962769_77962931_77963573_77963716_77964061_77964163_77964253_77964357_77964645_77964748_77964869_77964969_77965068_77965232_77966693_77966752_77966883_77966956_77967048_77967102_77967626_77967667_77968164_77968204_77969924_77970016_77978884
H1_mix_00008637	chr1	-	371	3	FSM	ENSG00000162618.15	ENST00000664452.1	791	3	0	420	0	-420	multi-exon	FALSE	canonical	2	2	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGTATATATAAAATTGT	NA	False	NA	NA	False	AAAACA	-45	NA	78920265	78917633	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_78917701_78917829_78918051_78920182
H1_mix_00008638	chr1	-	450	1	FSM	ENSG00000230787.1	ENST00000439132.1	1111	1	34	627	34	-627	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACTTTATACCCTATGTC	NA	False	NA	NA	False	NA	NA	NA	79056021	79055571	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_79055600_79056000
H1_mix_00008639	chr1	-	769	4	NNC	ENSG00000288822.1	novel	576	2	NA	NA	0	48613	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	4.54606056566195	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGAACCATGCAGGGGAT	-1	True	NA	NA	False	AATAAA	-45	NA	79493813	79440030	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_79440204_79442897_79442986_79462541_79462797_79493560
H1_mix_00008640	chr1	-	5505	14	NIC	ENSG00000117155.17	novel	5752	14	NA	NA	-9073	-206	combination_of_known_junctions	FALSE	canonical	3	20	junction_13	60.1611248793235	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATGACTGGTTGAGGTT	9927	False	NA	-2	True	ATTAAA	-20	NA	84680388	84643912	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_84647608_84650361_84650528_84651882_84651998_84655831_84656006_84656347_84656485_84658317_84658469_84662197_84662376_84662454_84662531_84664416_84664553_84666121_84666233_84669680_84669894_84670645_84670816_84671176_84671309_84680337
H1_mix_00008642	chr1	-	945	2	NIC	ENSG00000171517.6	novel	3515	3	NA	NA	12	510	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCAATGGTGTTTTTTTC	1	True	NA	-5	True	ATTAAA	-17	NA	84893194	84813405	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_84814172_84893015
H1_mix_00008643	chr1	-	2845	14	NIC	ENSG00000055732.13	novel	2810	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_13	10.506689894747	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGATGAAGTAATTATT	-22	True	NA	NA	False	ATTAAA	-17	NA	85048500	85018081	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_85019258_85021069_85021277_85022069_85022193_85022298_85022401_85025938_85026089_85026171_85026285_85029105_85029206_85032695_85032793_85032871_85032957_85034097_85034252_85041009_85041178_85045132_85045363_85047574_85047610_85048395
H1_mix_00008644	chr1	-	292	1	FSM	ENSG00000272691.1	ENST00000609367.1	243	1	-56	7	-56	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCCAACTGGCCGTATATA	3808	False	NA	NA	False	AATAAA	-13	NA	85578798	85578506	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_85578500_85578800
H1_mix_00008645	chr1	-	8148	16	NIC	ENSG00000122417.15	novel	4376	18	NA	NA	0	707	combination_of_known_junctions	FALSE	canonical	3	24	junction_10	26.7428910595362	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCATTGGTTCTGCTTCA	NA	False	NA	NA	False	ATTAAA	-15	NA	86396340	86346116	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_86352209_86352858_86352985_86354529_86354693_86354773_86354860_86356443_86356603_86358786_86358892_86360425_86360537_86371017_86371154_86372430_86372541_86376232_86376419_86382930_86383003_86383133_86383197_86384675_86384802_86385457_86385591_86386914_86387087_86396032
H1_mix_00008647	chr1	-	695	1	FSM	ENSG00000272931.1	ENST00000609194.1	695	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTTCATATCTTCTTTT	922	False	NA	-16	True	AATAAA	-18	NA	89820868	89820173	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_89820200_89820900
H1_mix_00008648	chr1	-	2743	2	FSM	ENSG00000233593.11	ENST00000455680.5	2986	2	243	0	199	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGAGATCGTGCTTTGC	241	False	NA	NA	False	AATAAA	-17	NA	90835918	90829546	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_90832197_90835825
H1_mix_00008649	chr1	-	5979	7	NNC	ENSG00000122482.22	novel	5541	6	NA	NA	-44	38	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_6	102.61700638783	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACTTCAGGTTGTGTTTC	NA	False	NA	17	True	ATTAAA	-40	NA	91022316	90915259	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_90916991_90918051_90918155_90937484_90938091_90938271_90941310_90982309_90982371_91021688_91021802_91021989
H1_mix_00008650	chr1	-	4178	5	NNC	ENSG00000122482.22	novel	5702	6	NA	NA	-4396	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_3	102.92078264374	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAAACATTTCTTATTTT	NA	False	NA	-21	True	AATAAA	-24	NA	90939924	90915297	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_90916991_90918051_90918155_90935407_90935531_90937484_90938091_90938271
H1_mix_00008651	chr1	-	2908	17	FSM	ENSG00000069702.11	ENST00000465892.6	2908	17	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	6.47078772252652	659	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAACCCGGCCCAACCCAG	108	False	NA	NA	False	NA	NA	NA	91886109	91683728	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_91683858_91695671_91695780_91698088_91698131_91708662_91708784_91712242_91712543_91716235_91716395_91716567_91716709_91719311_91719465_91719892_91720228_91721954_91722145_91727658_91727807_91729804_91729974_91734775_91734960_91758612_91758751_91797286_91797472_91861470_91861645_91885877
H1_mix_00008652	chr1	-	906	1	FSM	ENSG00000230667.7	ENST00000596516.3	879	1	-4	-23	-4	23	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTTTTTAAAATTTTCT	16	False	NA	NA	False	AATAGA	-20	NA	92075415	92074509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_92074500_92075400
H1_mix_00008653	chr1	-	7794	20	FSM	ENSG00000067208.16	ENST00000684568.2	7795	20	1	0	-1	0	multi-exon	FALSE	canonical	1	1	junction_7	14.7561903062603	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTCCTTCAGCTTT	-18	True	NA	0	True	ATTAAA	-20	NA	92785107	92508695	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_92513971_92563641_92563738_92605306_92605403_92607580_92607728_92624175_92624335_92625793_92625935_92636201_92636337_92662718_92662866_92663419_92663453_92665938_92665993_92677157_92677219_92693801_92693900_92694298_92694389_92695309_92695454_92697859_92697986_92702140_92702216_92703394_92703620_92704554_92704745_92736397_92736628_92784835
H1_mix_00008654	chr1	-	2062	11	FSM	ENSG00000223745.8	ENST00000661111.1	2062	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	13.8423263940712	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATCTATATAGCCCCAGAA	-31	True	NA	-69	True	NA	NA	NA	93345848	93264704	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_93264773_93305387_93305471_93311489_93311609_93324634_93324730_93325768_93325896_93337376_93337513_93338229_93339275_93339356_93339537_93339648_93339680_93340457_93340511_93345723
H1_mix_00008655	chr1	-	2689	7	NNC	ENSG00000223745.8	novel	752	6	NA	NA	0	4679	intron_retention	FALSE	canonical	0	0	junction_6	14.682756326158	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTAAGAATTGATGTTGG	18	True	NA	-58	True	NA	NA	NA	93345799	93332295	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_93333464_93337376_93337513_93338229_93339275_93339356_93339537_93339648_93339680_93340457_93340511_93345723
H1_mix_00008656	chr1	-	3217	14	FSM	ENSG00000137936.18	ENST00000370244.5	3217	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	29.7110343497189	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGTATCCAGTCTCTTT	994	False	NA	-7	True	AATACA	-14	NA	93847150	93561790	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_93562420_93567278_93567492_93567739_93567852_93571669_93571842_93576013_93576130_93582300_93582954_93584017_93584122_93588976_93589420_93592264_93592394_93642303_93642344_93674613_93674942_93706091_93706143_93845566_93845713_93847069
H1_mix_00008657	chr1	-	560	3	ISM	ENSG00000224081.10	ENST00000634937.1	2100	6	-53	22045	0	24	5prime_fragment	FALSE	canonical	2	7	junction_2	1.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGTGCCAGCACACCAAG	23	True	NA	NA	False	NA	NA	NA	94820210	94638436	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_94638559_94679424_94679608_94819955
H1_mix_00008658	chr1	-	1976	6	FSM	ENSG00000117519.16	ENST00000394202.8	1974	6	0	-2	0	2	multi-exon	FALSE	canonical	3	179	junction_3	1511.78551388747	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGATTATTTTCTGGCT	286	False	NA	4	True	AATAAA	-30	NA	94927223	94896946	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_94898084_94899370_94899518_94901668_94901786_94903121_94903189_94903402_94903525_94926837
H1_mix_00008659	chr1	-	6971	17	FSM	ENSG00000156869.14	ENST00000646001.2	6971	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.5090870584562	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGACTATTGTATTAATATGA	-4	True	NA	-4	True	AATAAA	-18	NA	99766635	99703969	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_99709121_99709197_99709260_99710805_99710950_99712104_99712164_99712417_99712516_99715585_99715673_99717409_99717526_99719533_99719648_99728492_99728641_99729649_99729749_99738085_99738269_99740792_99740941_99742178_99742274_99747293_99747431_99748572_99748769_99748896_99749002_99766606
H1_mix_00008662	chr1	-	2182	1	FSM	ENSG00000085491.17	ENST00000569674.1	2357	1	140	35	140	-35	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATAGTTTAAAAACGATTG	156	False	NA	NA	False	TTTAAA	-17	NA	108200709	108198527	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_108198500_108200700
H1_mix_00008663	chr1	-	1559	7	NIC	ENSG00000162639.16	novel	1662	8	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	11	junction_6	22.408455745296	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTTTGAACTTACCTAT	-6	True	NA	-9	True	AATAAA	-22	NA	108661093	108648298	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_108648992_108650210_108650389_108651029_108651210_108654715_108654851_108655585_108655699_108657450_108657580_108660962
H1_mix_00008664	chr1	-	376	1	FSM	ENSG00000228076.2	ENST00000444669.2	744	1	731	-363	731	363	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAACGTATATGTTCTGG	NA	False	NA	NA	False	NA	NA	NA	108766853	108766477	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_108766500_108766900
H1_mix_00008665	chr1	-	6931	14	FSM	ENSG00000121940.17	ENST00000675001.1	6917	14	0	-14	0	0	multi-exon	TRUE	canonical	1	1	junction_9	60.0664326505324	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACCACATGCTCCTCTT	10	True	NA	NA	False	NA	NA	NA	108963450	108927704	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_108932502_108934624_108934943_108937076_108937419_108939635_108939783_108940044_108940143_108941404_108941499_108943474_108943616_108943835_108944058_108947337_108947509_108947610_108947719_108949819_108949922_108950308_108950449_108962308_108962470_108963360
H1_mix_00008666	chr1	-	6792	13	FSM	ENSG00000121940.17	ENST00000674992.1	6824	13	32	0	3	0	multi-exon	FALSE	canonical	1	1	junction_9	57.5327805110559	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACCACATGCTCCTCTT	-12	True	NA	NA	False	NA	NA	NA	108963472	108927704	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_108932502_108934624_108934943_108937076_108937419_108939635_108939783_108940044_108940143_108941404_108941499_108943474_108943616_108943835_108944058_108947337_108947509_108947610_108947719_108949819_108949922_108950308_108950449_108963360
H1_mix_00008667	chr1	-	2220	3	ISM	ENSG00000121940.17	ENST00000688298.1	8164	4	956	5735	956	134	3prime_fragment	FALSE	canonical	3	150	junction_2	4	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTAATTTAGAACTTTTT	NA	False	NA	NA	False	NA	NA	NA	108938135	108931658	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_108932502_108934624_108934943_108937076
H1_mix_00008668	chr1	-	2314	13	FSM	ENSG00000121940.17	ENST00000690756.1	8546	13	65	6167	3	15	multi-exon	FALSE	canonical	0	0	junction_12	47.5858142960927	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGGTCAGGCTGGTCTC	50	False	NA	NA	False	NA	NA	NA	108963410	108932090	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_108932502_108934624_108934943_108937076_108937419_108939635_108939783_108940044_108940143_108941404_108941499_108943474_108943616_108943835_108944058_108947610_108947719_108949819_108949922_108950308_108950449_108962308_108962470_108963380
H1_mix_00008669	chr1	-	2208	12	FSM	ENSG00000121940.17	ENST00000690781.1	6981	12	64	4709	2	15	multi-exon	FALSE	canonical	3	15	junction_1	43.7105430102159	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGGTCAGGCTGGTCTC	20	True	NA	NA	False	NA	NA	NA	108963440	108932090	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_108932502_108934619_108934943_108937076_108937419_108939635_108939783_108940044_108940143_108941404_108941499_108943474_108943616_108943835_108944058_108947610_108947719_108949819_108949922_108950308_108950449_108963360
H1_mix_00008670	chr1	-	2225	12	FSM	ENSG00000121940.17	ENST00000685540.1	8419	12	27	6167	3	15	multi-exon	FALSE	canonical	3	13	junction_11	40.5128282917689	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGGTCAGGCTGGTCTC	-12	True	NA	NA	False	NA	NA	NA	108963472	108932090	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_108932502_108934624_108934943_108937076_108937419_108939635_108939783_108940044_108940143_108941404_108941499_108943474_108943616_108943835_108944058_108947610_108947719_108949819_108949922_108950308_108950439_108963360
H1_mix_00008671	chr1	-	7062	21	NNC	ENSG00000134243.12	novel	6990	20	NA	NA	-43	87558	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	128.227639376228	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATATATATATATAT	NA	False	NA	NA	False	NA	NA	NA	109397961	109222009	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_109222045_109309577_109314058_109314260_109314385_109314671_109314779_109316849_109316959_109317852_109317970_109322931_109323122_109324898_109325090_109326991_109327161_109327498_109327602_109336239_109336347_109340723_109340880_109342013_109342159_109345750_109345879_109347482_109347533_109350928_109351003_109354366_109354532_109355366_109355470_109367407_109367482_109369529_109369590_109397586
H1_mix_00008672	chr1	-	1615	8	NIC	ENSG00000134222.16	novel	1584	8	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_3	147.731140237657	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGGAAGTCGATCCTGC	13	True	NA	-11	True	AATAAA	-27	NA	109283141	109279555	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_109280157_109280395_109280490_109280776_109280917_109281107_109281252_109281618_109282061_109282517_109282576_109282679_109282737_109283062
H1_mix_00008673	chr1	-	1701	8	NIC	ENSG00000134222.16	novel	1717	8	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_7	140.709281999505	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGGAAGTCGATCCTGC	12	True	NA	-11	True	AATAAA	-27	NA	109283142	109279555	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618_109282061_109282517_109282576_109282679_109282732_109283073
H1_mix_00008674	chr1	-	1711	8	NIC	ENSG00000134222.16	novel	1717	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	43	junction_7	140.125890919995	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGGAAGTCGATCCTGC	7	True	NA	-11	True	AATAAA	-27	NA	109283147	109279555	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618_109282061_109282517_109282576_109282679_109282737_109283073
H1_mix_00008675	chr1	-	1650	8	NIC	ENSG00000134222.16	novel	1742	8	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_3	150.711374379464	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTCTGTATATCTGGAA	20	True	NA	-22	True	AATAAA	-16	NA	109283134	109279566	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_109280157_109280395_109280490_109280776_109280970_109281107_109281252_109281618_109282061_109282517_109282576_109282679_109282737_109283062
H1_mix_00008677	chr1	-	716	5	FSM	ENSG00000134248.14	ENST00000483260.5	694	5	0	-22	0	22	multi-exon	FALSE	canonical	3	22	junction_4	1127.42372247527	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCAAATGTTCCTTTTGT	2	True	NA	-5	True	AATAAA	-43	NA	110407668	110401226	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_110401584_110403918_110404037_110406317_110406380_110407032_110407129_110407585
H1_mix_00008678	chr1	-	4837	1	FSM	ENSG00000259834.1	ENST00000566942.1	3481	1	-1362	6	-1362	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATCCTGTTGCGCATA	NA	False	NA	NA	False	AATAAA	-8	NA	110658402	110653565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_110653600_110658400
H1_mix_00008679	chr1	-	1752	8	NNC	ENSG00000156171.15	novel	2246	9	NA	NA	-75	-63	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_4	99.5616924938749	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCCCAAATTCTAAAGAACA	605	False	NA	-74	True	NA	NA	NA	111139595	111117225	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_111118268_111118804_111118898_111119876_111119960_111120531_111120694_111126226_111126295_111131423_111131569_111137522_111137587_111139500
H1_mix_00008680	chr1	-	350	1	FSM	ENSG00000201028.1	ENST00000364158.1	107	1	-248	5	-248	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCAATGGTCTATTTT	NA	False	NA	NA	False	NA	NA	NA	111650785	111650435	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_111650400_111650800
H1_mix_00008681	chr1	-	1763	1	FSM	ENSG00000284830.1	ENST00000625113.1	1763	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAGTAATTTTGTCATCC	312	False	NA	-7	True	AATAAA	-16	NA	111755537	111753774	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_111753800_111755500
H1_mix_00008682	chr1	-	533	1	FSM	ENSG00000273483.1	ENST00000608357.1	643	1	25	85	25	-85	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTACACTTCAAGGAGCA	NA	False	NA	NA	False	AAGAAA	-33	NA	112518416	112517883	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_112517900_112518400
H1_mix_00008684	chr1	-	2199	6	FSM	ENSG00000155366.17	ENST00000285735.6	2199	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	319.245986662323	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTGTGTGGCAGCTTTCG	-1	True	NA	-36	True	AATAAA	-14	NA	112707127	112701132	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_112701714_112702562_112702694_112702998_112703120_112703643_112703807_112705099_112706253_112707077
H1_mix_00008685	chr1	-	342	3	FSM	ENSG00000155366.17	ENST00000478447.1	420	3	0	78	0	-78	multi-exon	FALSE	canonical	3	105	junction_2	71	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCCATTCCTACCCCTGT	12	True	NA	NA	False	NA	NA	NA	112707114	112703570	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_112703807_112705099_112705169_112707077
H1_mix_00008687	chr1	-	443	2	Intergenic	novelGene_85	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTCCTATCTCTTGCCTC	NA	False	NA	NA	False	GATAAA	-28	NA	112806923	112801043	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_-_112801262_112806698
H1_mix_00008690	chr1	-	6298	19	NNC	ENSG00000116793.16	novel	3657	19	NA	NA	-92	1390	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	66.2283973630946	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCACTGCTCTTATTTA	NA	False	NA	NA	False	NA	NA	NA	113759581	113695440	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_113697726_113698261_113698388_113698991_113700244_113700793_113700950_113704080_113704168_113704665_113704798_113705889_113706163_113706593_113706723_113710253_113710476_113711745_113711836_113711939_113712114_113713278_113713439_113724758_113724894_113726417_113726575_113738109_113738269_113738729_113738800_113757698_113757756_113758658_113758734_113759022
H1_mix_00008692	chr1	-	2846	18	NNC	ENSG00000116793.16	novel	2747	15	NA	NA	0	-150	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_14	76.4318453893361	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTCATCATTAATTTTT	19	True	NA	-1	True	ATTAAA	-26	NA	113759489	113700024	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_113700244_113700793_113700950_113704080_113704168_113704665_113704798_113705889_113706163_113706593_113706723_113710253_113710476_113711745_113711836_113711939_113712114_113713278_113713439_113724758_113724894_113726417_113726575_113738109_113738269_113738729_113738800_113749505_113749590_113757698_113757756_113758658_113758734_113759022
H1_mix_00008693	chr1	-	1653	11	NNC	ENSG00000116793.16	novel	2747	15	NA	NA	1103	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	100.243902557712	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGATATTTGTGGATTT	1456	False	NA	-8	True	AATAAA	-16	NA	113758052	113705764	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_113706163_113706593_113706723_113710253_113710476_113711745_113711836_113711939_113712114_113713278_113713439_113724758_113724894_113726417_113726575_113738729_113738800_113757698_113757756_113757991
H1_mix_00008694	chr1	-	3189	8	NNC	ENSG00000116793.16	novel	770	4	NA	NA	-379	7847	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	76.4113465236088	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAAAGTTTGTTTCTTGT	NA	False	NA	NA	False	NA	NA	NA	113759868	113717487	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_113719927_113724758_113724894_113726417_113726575_113738109_113738269_113738729_113738800_113757698_113757756_113758658_113758734_113759771
H1_mix_00008695	chr1	-	3048	4	NIC	ENSG00000116793.16	novel	956	3	NA	NA	31	2746	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	70.0587055420111	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAACATTTTTCCTCCAA	384	False	NA	-8	True	AATAAA	-10	NA	113759124	113746775	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_113749590_113757698_113757756_113758658_113758734_113759022
H1_mix_00008696	chr1	-	4848	8	ISM	ENSG00000134262.13	ENST00000256658.8	2742	11	228	308	2	0	intron_retention	FALSE	canonical	3	61	junction_7	13.6531374879661	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTTGTCTAGAGTAAGA	7	True	NA	-22	True	AATAAA	-17	NA	113904842	113895055	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_113895493_113895756_113896039_113896257_113896466_113897839_113897944_113898717_113898802_113899903_113900401_113901235_113901384_113901754
H1_mix_00008698	chr1	-	773	6	Antisense	novelGene_ENSG00000116774.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_2	44.0980725202361	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTTTGTAAACAATGTGT	NA	False	NA	-28	True	ATTAAA	-12	NA	114032197	114014915	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr1_-_114015170_114016060_114016157_114021928_114022043_114022679_114022781_114026725_114026776_114032039
H1_mix_00008699	chr1	-	4354	8	FSM	ENSG00000134207.17	ENST00000607941.5	4352	8	0	-2	0	1	multi-exon	TRUE	canonical	2	13	junction_7	113.474981509456	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTGTCATTTTATGTTC	1428	False	NA	-1	True	ATTAAA	-20	NA	114152440	114089289	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_114092083_114093734_114093804_114097726_114097878_114099093_114099266_114103600_114103722_114137494_114138054_114139614_114139881_114152217
H1_mix_00008700	chr1	-	1230	5	NNC	ENSG00000134207.17	novel	843	3	NA	NA	-17	-10854	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	146.528154291249	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGCTTTGTATTCTTTA	929	False	NA	NA	False	ATTAAA	-13	NA	114152939	114102618	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_114102729_114103600_114103722_114137494_114138054_114139614_114139881_114152765
H1_mix_00008701	chr1	-	6105	4	NNC	ENSG00000134207.17	novel	843	3	NA	NA	96	5738	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_1	153.851299059261	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGGGATCCAGAAGAGTG	114	False	NA	-13	True	AATAAA	-21	NA	114153754	114131930	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_114137066_114137494_114138054_114139614_114139881_114153609
H1_mix_00008702	chr1	-	536	2	FSM	ENSG00000197323.12	ENST00000478032.1	536	2	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CGAAAAAAAAAAAAAAAACA	5819	False	NA	NA	False	AGTAAA	-40	NA	114399609	114397607	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_114397991_114399456
H1_mix_00008703	chr1	-	4785	20	NNC	ENSG00000175984.15	novel	6177	21	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	2	8	junction_1	6.37646295201292	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATCCCTTGGAGAATTCT	-4	True	NA	-14	True	AATAAA	-16	NA	114670043	114582851	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_114583554_114584568_114585632_114587386_114587474_114587715_114587953_114594472_114594579_114595831_114595874_114599273_114599452_114600203_114600353_114600819_114600961_114601507_114601586_114602124_114602195_114604921_114605032_114608685_114608874_114611072_114611118_114618385_114618483_114621894_114622066_114622986_114623100_114623506_114623644_114625178_114626189_114669982
H1_mix_00008704	chr1	-	4045	20	NNC	ENSG00000009307.17	novel	4141	20	NA	NA	-3331	64251	intron_retention	FALSE	non_canonical	0	0	junction_1	1095.15526669589	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATGTAAGGCTATAAGT	8430	False	NA	NA	False	TTTAAA	-24	NA	114750190	114652661	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_114652687_114716915_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737470_114737564_114737962_114738073_114739691_114739891_114749820
H1_mix_00008705	chr1	-	4019	20	NNC	ENSG00000009307.17	novel	4097	20	NA	NA	0	64251	intron_retention	FALSE	non_canonical	0	0	junction_1	852.647287054784	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATGTAAGGCTATAAGT	11	True	NA	NA	False	TTTAAA	-24	NA	114757974	114652661	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_114652687_114716915_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737962_114738073_114739691_114739891_114749820_114750208_114757924
H1_mix_00008706	chr1	-	3990	19	NIC	ENSG00000009307.17	novel	4097	20	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_8	875.487349289201	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTAGCGCTTTCATTAT	12	True	NA	-3	True	AATAAA	-25	NA	114757973	114716915	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727088_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737962_114738073_114739691_114739891_114749820_114750208_114757924
H1_mix_00008707	chr1	-	1055	3	FSM	ENSG00000134259.6	ENST00000369512.3	1061	3	2	4	2	-4	multi-exon	FALSE	canonical	0	0	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATCCTGTGTGCTGATGC	-4	True	NA	NA	False	ATTAAA	-9	NA	115338247	115285920	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_115286808_115293626_115293751_115338203
H1_mix_00008708	chr1	-	634	1	FSM	ENSG00000177173.5	ENST00000319092.5	1157	1	152	371	152	-371	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTCAAAACCATCAAGAAAA	165	False	NA	NA	False	AAGAAA	-15	NA	116533940	116533306	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_116533300_116533900
H1_mix_00008709	chr1	-	947	1	FSM	ENSG00000272715.1	ENST00000610171.1	383	1	-567	3	-567	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAATAGAGTTTTGTGCT	NA	False	NA	NA	False	AATAAA	-16	NA	116910098	116909151	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_116909200_116910100
H1_mix_00008710	chr1	-	3306	18	NNC	ENSG00000275131.3	novel	6897	42	NA	NA	-9164	207	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	43.5295707469275	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTCAGGCTAACGAGCT	NA	False	NA	NA	False	NA	NA	NA	120557521	120519260	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_120519411_120520233_120520670_120523893_120524127_120530295_120530385_120531877_120532090_120536310_120536403_120538322_120538405_120538570_120538736_120541891_120542087_120543016_120543197_120543946_120544085_120544266_120544381_120545280_120545440_120548288_120548502_120548640_120548734_120548972_120549093_120550144_120550277_120557018
H1_mix_00008712	chr1	-	1314	3	FSM	ENSG00000188610.12	ENST00000619376.4	1659	3	857	-512	-59	0	multi-exon	FALSE	canonical	1	10	junction_1	119.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCTTCCTTTAATTTTT	878	False	NA	NA	False	AATAAA	-18	NA	121183457	121167719	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_121168836_121181270_121181349_121183337
H1_mix_00008713	chr1	-	3963	18	NNC	ENSG00000266338.7	novel	4862	22	NA	NA	2619	22	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	18.6845975833361	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGACTTCTGGATTGTTT	4905	False	NA	NA	False	ATTAAA	-17	NA	144456761	144421493	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_144423257_144423869_144423976_144424689_144424863_144425516_144425569_144426277_144426371_144427910_144427991_144428605_144428658_144429699_144429864_144433772_144433825_144435110_144435317_144435780_144435854_144436894_144437110_144437944_144438048_144439828_144440039_144440140_144440296_144448774_144448917_144450771_144450871_144456536
H1_mix_00008714	chr1	-	3405	5	NNC	ENSG00000266338.7	novel	4862	22	NA	NA	0	-9201	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	13.1624465810882	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACTGCTATGAACATTC	108	False	NA	NA	False	NA	NA	NA	144461558	144449409	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_144452150_144456536_144456806_144459365_144459465_144460842_144460962_144461380
H1_mix_00008715	chr1	-	269	1	Intergenic	novelGene_99	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	4210	False	NA	NA	False	NA	NA	NA	144547721	144547452	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_-_144547500_144547700
H1_mix_00008717	chr1	-	9638	5	Intergenic	novelGene_103	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_3	8.20060973342836	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTAGCACTTTATGTCAA	-1	True	NA	NA	False	NA	NA	NA	145425608	145411805	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_-_145420757_145422795_145422985_145423313_145423437_145424779_145424899_145425352
H1_mix_00008718	chr1	-	2167	12	NNC	ENSG00000174827.14	novel	2084	9	NA	NA	16	0	intron_retention	FALSE	canonical	1	2	junction_11	40.0024792620087	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGAGTATGCTTGATAG	12	True	NA	NA	False	AATAAA	-17	NA	145707352	145670985	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_145671490_145672729_145673021_145673721_145673882_145674269_145674327_145676157_145676214_145678448_145678646_145680911_145681108_145682499_145682637_145686476_145686727_145687811_145688024_145691731_145691803_145707316
H1_mix_00008720	chr1	-	1643	5	NNC	ENSG00000131779.11	novel	1620	4	NA	NA	0	89892	intron_retention	FALSE	non_canonical	0	0	junction_1	52.0960651105244	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTGAGAAGACAGTCTAAA	-10	True	NA	NA	False	AATAGA	-41	NA	145918717	145821457	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_145821483_145911351_145912567_145916816_145917019_145917700_145917817_145918632
H1_mix_00008721	chr1	-	4906	7	NNC	ENSG00000265241.8	novel	796	6	NA	NA	0	100098	intron_retention	FALSE	non_canonical	0	0	junction_1	1052.36442779528	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTGAGAAGACAGTCTAAA	8835	False	NA	NA	False	AATAGA	-41	NA	145927460	145821457	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_145821483_145921559_145925928_145926040_145926178_145926481_145926619_145926808_145926887_145927017_145927078_145927359
H1_mix_00008722	chr1	-	773	7	NNC	ENSG00000265241.8	novel	4909	6	NA	NA	0	13799	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1249.72069101682	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGACCTTTTCAGACATG	7	True	NA	NA	False	AAAAAG	-3	NA	145927484	145907756	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_145907790_145925721_145925928_145926040_145926178_145926481_145926619_145926808_145926884_145927017_145927078_145927359
H1_mix_00008724	chr1	-	799	1	FSM	ENSG00000201558.1	ENST00000364688.1	164	1	0	-635	0	635	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTAGCCGGGTGTGG	-1	True	NA	NA	False	AATAAA	-12	NA	146052244	146051445	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_146051400_146052200
H1_mix_00008725	chr1	-	13030	90	FSM	ENSG00000271425.9	ENST00000583866.9	13030	90	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_3	9.69944755740364	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCATTTCCATGTTTAT	123	False	NA	NA	False	AATAAA	-3	NA	146144804	146064710	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_146066562_146067179_146067289_146068002_146068176_146068771_146068824_146069542_146069716_146070323_146070433_146071146_146071320_146071967_146072020_146072728_146072902_146073499_146073552_146074270_146074444_146075045_146075155_146075868_146076042_146076705_146076758_146077466_146077640_146078235_146078288_146079006_146079180_146079781_146079891_146080604_146080778_146081435_146081488_146082196_146082370_146082965_146083018_146083736_146083910_146084517_146084627_146085340_146085514_146086163_146086216_146086923_146087097_146087692_146087745_146088463_146088637_146089238_146089348_146090061_146090235_146090880_146090933_146091641_146091815_146092410_146092463_146093181_146093355_146093956_146094066_146094779_146094953_146095602_146095655_146096363_146096537_146097132_146097185_146097903_146098077_146098678_146098788_146099501_146099675_146100324_146100377_146101085_146101259_146101854_146101907_146102625_146102799_146103400_146103510_146104223_146104397_146105042_146105095_146105803_146105977_146106572_146106625_146107343_146107517_146108118_146108228_146108941_146109115_146109750_146109803_146110511_146110685_146111280_146111333_146112053_146112227_146112828_146112938_146113651_146113825_146114468_146114521_146115229_146115403_146115998_146116051_146116771_146116945_146117546_146117656_146118369_146118543_146119194_146119247_146119955_146120129_146120724_146120777_146121497_146121671_146122282_146122392_146123105_146123279_146123926_146123979_146124687_146124861_146125464_146125517_146126235_146126409_146127027_146127080_146128118_146128283_146132185_146132238_146133522_146133729_146134192_146134266_146135306_146135522_146136352_146136456_146138235_146138446_146139808_146140021_146140483_146140557_146141603_146141819_146142649_146142753_146144594
H1_mix_00008726	chr1	-	1103	5	FSM	ENSG00000264343.7	ENST00000687833.1	1135	5	24	8	9	4	multi-exon	FALSE	canonical	3	11	junction_4	28.6006992921502	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACATTAACAGTGGGTGA	3	False	NA	NA	False	AATAAA	-16	NA	146229017	146156105	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_146156230_146156479_146156816_146164750_146165011_146189299_146189374_146228708
H1_mix_00008729	chr1	-	742	1	FSM	ENSG00000286172.1	ENST00000651973.1	141	1	50	-651	50	651	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGGGACACATTACAAAA	49	False	NA	NA	False	NA	NA	NA	147084706	147083964	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_147084000_147084700
H1_mix_00008730	chr1	-	5390	6	NIC	ENSG00000131791.8	novel	5343	8	NA	NA	44	-3	combination_of_known_junctions	FALSE	canonical	3	43	junction_5	68.2917271710125	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATCTGAGTTATTGATT	144	False	NA	-17	True	AATAAA	-16	NA	147172426	147155108	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_147159643_147161711_147161781_147162439_147162574_147166497_147166619_147166845_147166940_147171988
H1_mix_00008731	chr1	-	5447	9	NIC	ENSG00000131791.8	novel	5343	8	NA	NA	10	-3	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	79.1161132450274	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATCTGAGTTATTGATT	30	False	NA	-17	True	AATAAA	-16	NA	147172540	147155108	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_147159643_147160796_147160834_147161711_147161781_147162439_147162574_147166497_147166619_147166845_147166940_147167766_147167934_147171988_147172168_147172428
H1_mix_00008732	chr1	-	1858	6	FSM	ENSG00000162836.12	ENST00000609196.5	1874	6	0	16	0	-16	multi-exon	FALSE	canonical	1	2	junction_1	31.7011040817193	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCACCAAATTAGGATTCC	NA	False	NA	-15	True	ATTAAA	-5	NA	147659001	147629667	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_147631066_147650142_147650239_147652448_147652550_147654193_147654327_147655160_147655249_147658959
H1_mix_00008733	chr1	-	240	2	NNC	ENSG00000215859.9	novel	3498	9	NA	NA	15410	6	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGAGTATGCTTGATAG	NA	False	NA	NA	False	AATAAA	-17	NA	147994182	147993855	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_147993995_147994081
H1_mix_00008734	chr1	-	1419	5	ISM	ENSG00000215859.9	ENST00000425209.1	1350	7	3710	1295	3710	-1295	internal_fragment	FALSE	canonical	3	41	junction_4	18.3439363278441	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGGGGGCCTATTTCT	NA	False	NA	NA	False	NA	NA	NA	148005882	147995595	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_147995887_147996522_147996748_148001318_148001516_148003786_148003983_148005372
H1_mix_00008735	chr1	-	5732	25	NNC	ENSG00000263956.8	novel	5423	24	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_7	16.238457439055	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGACTTTTGGATTGTT	-1	False	NA	-6	True	ATTAAA	-16	NA	148152313	148102150	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_148103913_148104536_148104646_148105359_148105529_148106180_148106233_148106941_148107115_148107710_148107763_148108481_148108655_148109283_148109336_148110377_148110542_148114436_148114489_148115792_148115999_148116462_148116536_148117571_148117787_148118619_148118723_148120500_148120711_148122054_148122267_148122728_148122802_148123852_148124068_148124898_148125002_148126828_148127039_148135671_148136038_148137710_148137810_148140511_148140565_148143414_148143687_148151749
H1_mix_00008736	chr1	-	201	3	FSM	ENSG00000227733.11	ENST00000482381.2	261	3	60	0	57	0	multi-exon	FALSE	canonical	1	3	junction_1	2	184	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCTCTTCCTTGTAAC	NA	False	NA	NA	False	NA	NA	NA	148205692	148196249	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_148196282_148199994_148200095_148205623
H1_mix_00008737	chr1	-	592	4	ISM	ENSG00000270629.7	ENST00000621070.4	2701	19	3185	56262	980	4404	internal_fragment	TRUE	canonical	3	23	junction_2	19.131126469709	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATGTTTTCTAACTCAA	NA	False	NA	NA	False	AAGAAA	-23	NA	148592705	148589240	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_148589394_148590756_148590969_148591431_148591505_148592551
H1_mix_00008738	chr1	-	5828	28	NNC	ENSG00000269713.8	novel	6062	30	NA	NA	51	7	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_7	18.466816715826	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGGATTGTTTTTTACA	62	False	NA	NA	False	ATTAAA	-23	NA	149103488	149054130	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_149055900_149056511_149056621_149060522_149060696_149061331_149061384_149062092_149062266_149062861_149062914_149063632_149063806_149064430_149064483_149065525_149065690_149069593_149069646_149070933_149071140_149071603_149071677_149072717_149072933_149073767_149073871_149075654_149075865_149077207_149077420_149077882_149077956_149079006_149079222_149080052_149080156_149081964_149082175_149082271_149082431_149090204_149090429_149090752_149090895_149098437_149098707_149100740_149100931_149101261_149101380_149102728_149102848_149103270
H1_mix_00008739	chr1	-	1970	8	NNC	ENSG00000269713.8	novel	5632	28	NA	NA	-109	-29965	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	13.9269229793759	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACAATATCTTGACTCCT	NA	False	NA	NA	False	AATAAA	-41	NA	149103670	149089727	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_149090429_149090752_149090895_149092754_149092786_149098437_149098707_149100740_149100931_149101261_149101380_149102728_149102848_149103270
H1_mix_00008740	chr1	-	742	1	FSM	ENSG00000201699.1	ENST00000364829.1	162	1	13	-593	13	593	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTCAATTTCAACAGTC	13	False	NA	NA	False	NA	NA	NA	149162931	149162189	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_149162200_149162900
H1_mix_00008741	chr1	-	975	1	FSM	ENSG00000183598.4	ENST00000331491.2	469	1	14	-520	14	520	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGAGGCAAGAGAGTTAACT	13	False	NA	NA	False	AATAAA	-10	NA	149813679	149812704	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_149812700_149813700
H1_mix_00008743	chr1	-	2621	16	NNC	ENSG00000014914.21	novel	2840	17	NA	NA	-9	-3	intron_retention	FALSE	canonical	2	3	junction_5	6.14057543449038	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATTGCTGGCATTGTTTC	2817	False	NA	-5	True	ATTAAA	-15	NA	149936359	149928654	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_149929318_149929622_149929917_149930364_149930548_149930791_149930966_149931259_149931380_149931943_149932015_149932263_149932331_149933405_149933531_149933609_149933699_149933854_149933943_149934190_149934327_149934447_149934527_149934985_149935129_149935298_149935360_149935583_149935706_149936153
H1_mix_00008744	chr1	-	3055	5	FSM	ENSG00000143401.15	ENST00000629042.2	3054	5	0	-1	0	0	multi-exon	FALSE	canonical	1	14	junction_4	506.904021980493	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCAGTGTATAGCATTCA	-1	True	NA	-3	True	AATAAA	-24	NA	150236156	150218416	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_150220762_150223185_150223241_150226607_150226796_150229071_150229115_150235732
H1_mix_00008745	chr1	-	3266	7	NIC	ENSG00000143401.15	novel	3407	7	NA	NA	0	0	intron_retention	TRUE	canonical	3	150	junction_1	397.693628591435	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAAAAAATTTGCAGTA	-1	True	NA	-58	True	AATAAA	-21	NA	150236112	150218554	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_150220759_150223185_150223241_150226607_150226796_150229071_150229238_150230570_150230694_150231776_150231927_150235732
H1_mix_00008746	chr1	-	2553	7	Fusion	ENSG00000117362.13_ENSG00000289041.1	novel	1730	7	NA	NA	-11	0	intron_retention	FALSE	canonical	2	8	junction_6	165.435200473042	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGGGGAACTTGGCTTT	0	True	NA	-21	True	AATAAA	-14	NA	150282182	150265403	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_-_150266657_150267074_150267203_150267355_150267479_150267715_150267790_150267956_150268128_150268697_150269330_150282010
H1_mix_00008748	chr1	-	246	1	FSM	ENSG00000276103.1	ENST00000620626.1	117	1	-153	24	-153	-24	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCCTATAATCCCAGCACT	9562	False	NA	NA	False	NA	NA	NA	150608776	150608530	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_150608500_150608800
H1_mix_00008749	chr1	-	1621	8	FSM	ENSG00000143387.14	ENST00000676680.1	1625	8	0	4	0	2	multi-exon	FALSE	canonical	1	1	junction_3	11.0932963761812	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTTGTGTTGGATACT	-1	True	NA	-3	True	AATAAA	-17	NA	150808260	150796211	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_150796899_150799167_150799274_150799543_150799706_150804020_150804240_150805860_150806017_150806101_150806225_150806685_150806807_150808213
H1_mix_00008752	chr1	-	324	4	FSM	ENSG00000143434.17	ENST00000485745.1	324	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	19.6694913225759	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAGGAGGTGGGCATCAG	8323	False	NA	NA	False	NA	NA	NA	151139461	151137711	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151137800_151138008_151138106_151138629_151138732_151139424
H1_mix_00008753	chr1	-	568	2	FSM	ENSG00000163159.15	ENST00000471423.1	568	2	0	0	0	0	multi-exon	FALSE	canonical	2	620	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGACGGCTCTGACAGTGA	25	True	NA	NA	False	NA	NA	NA	151190143	151185521	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151185951_151190004
H1_mix_00008754	chr1	-	568	2	FSM	ENSG00000143442.22	ENST00000482678.1	568	2	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGGTCACACTATCTGC	6309	False	NA	NA	False	NA	NA	NA	151424463	151423498	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151423552_151423948
H1_mix_00008755	chr1	-	305	1	FSM	ENSG00000252840.1	ENST00000517031.1	108	1	9	-206	9	206	mono-exon	FALSE	NA	NA	NA	NA	NA	1791	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTATTTTTCTTTTGCT	NA	False	NA	NA	False	NA	NA	NA	151527929	151527624	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151527600_151527900
H1_mix_00008756	chr1	-	348	3	FSM	ENSG00000143436.11	ENST00000461182.1	348	3	0	0	0	0	multi-exon	FALSE	canonical	3	623	junction_2	28	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTTCCCTTTGACATTT	4806	False	NA	NA	False	GATAAA	-19	NA	151763334	151762317	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151762501_151762989_151763147_151763326
H1_mix_00008757	chr1	-	3742	15	Fusion	ENSG00000249602.1_ENSG00000182134.17	novel	2217	14	NA	NA	0	1454	multi-exon	TRUE	non_canonical	0	0	junction_1	86.7828629749125	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCCAGAAAGACACCTACT	13	True	NA	-11	True	AATAAA	-31	NA	151790488	151768652	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr1_-_151770078_151770106_151770563_151774412_151774505_151774709_151774807_151775064_151775167_151775391_151775544_151775819_151775885_151776095_151776269_151776438_151776600_151778684_151779007_151779102_151779243_151779950_151780141_151781480_151781588_151782898_151783050_151790379
H1_mix_00008759	chr1	-	357	3	FSM	ENSG00000143365.19	ENST00000651025.1	602	3	11	234	11	-234	multi-exon	FALSE	canonical	1	1	junction_2	0.5	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGAGATGGTGAGGCCAAG	5774	False	NA	NA	False	NA	NA	NA	151826067	151816672	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151816806_151817194_151817281_151825929
H1_mix_00008760	chr1	-	1519	1	FSM	ENSG00000201134.1	ENST00000364264.1	102	1	-1430	13	-1430	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	313	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGACTAGCCTAAAGAGAAAA	NA	False	NA	NA	False	NA	NA	NA	151843267	151841748	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_151841700_151843300
H1_mix_00008762	chr1	-	688	4	NNC	ENSG00000197747.9	novel	671	3	NA	NA	0	9551	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1396.06454801425	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATGGAGATAGCTTTCAA	-22	True	NA	NA	False	AAAAAG	-13	NA	151993859	151973363	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_151973382_151982915_151983325_151986098_151986252_151993751
H1_mix_00008763	chr1	-	466	3	FSM	ENSG00000196754.13	ENST00000368709.6	457	3	0	-9	0	6	multi-exon	FALSE	canonical	0	0	junction_2	4.5	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTCAGTGATGTTCCATA	NA	False	NA	6	True	AATAAA	-29	NA	153566755	153561333	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153561592_153563733_153563888_153566701
H1_mix_00008764	chr1	-	3176	2	FSM	ENSG00000285867.1	ENST00000647794.1	3176	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCATGCCCAGCCTTAGGA	9580	False	NA	NA	False	NA	NA	NA	153606283	153586812	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153589877_153606171
H1_mix_00008765	chr1	-	946	3	FSM	ENSG00000188643.11	ENST00000368703.6	946	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	423	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATAATGATGATATAAAG	8000	False	NA	-57	True	NA	NA	NA	153608322	153606974	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153607693_153607998_153608178_153608273
H1_mix_00008766	chr1	-	1165	5	FSM	ENSG00000189334.9	ENST00000368702.5	1218	5	48	5	-11	-5	multi-exon	FALSE	canonical	0	0	junction_4	139.088101575944	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACATGTTGTCTTGACT	9993	False	NA	-14	True	AATAAA	-16	NA	153616938	153614259	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153615023_153615234_153615382_153615828_153615937_153616294_153616356_153616852
H1_mix_00008767	chr1	-	1202	5	NNC	ENSG00000189334.9	novel	1218	5	NA	NA	-11	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	138.676557139266	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACATGTTGTCTTGACT	9993	False	NA	-14	True	AATAAA	-16	NA	153616938	153614259	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_153615023_153615234_153615382_153615828_153615937_153616294_153616356_153616815
H1_mix_00008768	chr1	-	529	3	FSM	ENSG00000189171.15	ENST00000339556.8	514	3	0	-15	0	3	multi-exon	FALSE	canonical	0	0	junction_2	273	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCATCCTGATTTCTTTTC	6252	False	NA	-5	True	AATAAA	-37	NA	153628180	153618783	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153619039_153626319_153626534_153628120
H1_mix_00008769	chr1	-	465	2	ISM	ENSG00000189171.15	ENST00000392622.3	547	3	491	8	491	-4	3prime_fragment	FALSE	canonical	3	546	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGAAACACAAATGTTTCT	7875	False	NA	-33	True	AATAAA	-9	NA	153626557	153618811	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_153619039_153626319
H1_mix_00008770	chr1	-	513	6	FSM	ENSG00000143621.17	ENST00000368681.1	726	6	0	213	0	-213	multi-exon	FALSE	canonical	3	3292	junction_5	166.439658735531	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATCTTTTTTTGTTTTGAG	0	True	NA	NA	False	NA	NA	NA	153670982	153667495	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153667658_153667999_153668078_153668452_153668558_153669835_153669879_153670170_153670231_153670917
H1_mix_00008771	chr1	-	5650	28	NNC	ENSG00000198837.10	novel	5728	28	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	58.0531424863265	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCGGCCTCCTGTTCCC	-18	True	NA	-9	True	AGTAAA	-18	NA	153946718	153929502	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_153930443_153930538_153930604_153930691_153930858_153931022_153931065_153932203_153932441_153932641_153932778_153932860_153933031_153933196_153933320_153933482_153933872_153934134_153934303_153934759_153934965_153936059_153936189_153936541_153936749_153937487_153937615_153937723_153937864_153938899_153939046_153939588_153939805_153940155_153940257_153940430_153940607_153940903_153941049_153941230_153941290_153941373_153941441_153941868_153942114_153942186_153942357_153942555_153942626_153942877_153943131_153944057_153944398_153946300
H1_mix_00008773	chr1	-	2262	12	NNC	ENSG00000160741.17	novel	2631	14	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	3	106	junction_7	22.9166654144753	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGTGTGGTTAGTTATT	9112	False	NA	-2	True	AATAAA	-16	NA	153954989	153947673	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_153948330_153948457_153948645_153949114_153949385_153951259_153951667_153952017_153952263_153952396_153952447_153952570_153952636_153952804_153952835_153953265_153953370_153953537_153953607_153954254_153954315_153954870
H1_mix_00008775	chr1	-	2598	14	NNC	ENSG00000160741.17	novel	2631	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	39	junction_7	34.9513609625733	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGGTGTGGTTAGTTAT	9586	False	NA	-3	True	AATAAA	-15	NA	153958564	153947674	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_153948330_153948457_153948645_153949114_153949385_153951259_153951667_153952017_153952263_153952396_153952447_153952570_153952651_153952804_153952835_153953265_153953370_153953537_153953607_153954254_153954315_153954870_153954990_153955064_153955167_153958344
H1_mix_00008776	chr1	-	912	4	FSM	ENSG00000143570.19	ENST00000417348.2	912	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	1062.0136010847	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGAGCTGTGCCTGGCT	4888	False	NA	NA	False	GGGGCT	-33	NA	153963262	153960453	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_153960755_153962219_153962351_153962528_153962748_153963001
H1_mix_00008777	chr1	-	4041	5	FSM	ENSG00000143549.21	ENST00000469717.5	4041	5	0	0	0	0	multi-exon	FALSE	canonical	2	82	junction_4	2174.39129413268	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCTATTTGACTTTTATT	8953	False	NA	-6	True	AATAAA	-22	NA	154183147	154156358	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154157722_154170399_154170470_154170648_154172979_154173083_154173202_154182987
H1_mix_00008778	chr1	-	1495	2	FSM	ENSG00000286391.2	ENST00000666466.2	1528	2	33	0	30	0	multi-exon	FALSE	canonical	3	4	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTCACTGAACTCCAGCC	-3	True	NA	NA	False	NA	NA	NA	154567716	154564854	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_154566183_154567549
H1_mix_00008779	chr1	-	604	1	FSM	ENSG00000179085.8	ENST00000368399.1	517	1	0	-87	0	87	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCATCTCAGCCTTTATC	130	False	NA	83	True	NA	NA	NA	155140407	155139803	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155139800_155140400
H1_mix_00008780	chr1	-	922	6	ISM	ENSG00000185499.17	ENST00000620103.4	1811	8	4681	1	117	1	3prime_fragment	FALSE	canonical	2	7	junction_3	0.979795897113271	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGATCTTTCATCTGT	8102	False	NA	-5	True	AATAAA	-22	NA	155188234	155185824	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_155186210_155187224_155187375_155187454_155187577_155187721_155187859_155188007_155188064_155188162
H1_mix_00008781	chr1	-	899	3	FSM	ENSG00000185499.17	ENST00000468978.2	899	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGGGAGCTTCAAGGAA	8505	False	NA	NA	False	NA	NA	NA	155187831	155186707	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155187375_155187454_155187577_155187721
H1_mix_00008782	chr1	-	3295	7	FSM	ENSG00000160766.15	ENST00000691975.1	3315	7	20	0	2	0	multi-exon	FALSE	canonical	3	15	junction_3	26.1114066177132	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGTGAGTGGCTTTAT	8550	False	NA	NA	False	NA	NA	NA	155218991	155213824	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155214474_155214567_155214685_155215053_155215788_155216383_155216622_155216856_155217030_155217239_155218480_155218847
H1_mix_00008783	chr1	-	1859	11	FSM	ENSG00000160766.15	ENST00000692820.1	1899	11	40	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	25.7285833267205	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGTGAGTGGCTTTAT	8548	False	NA	NA	False	NA	NA	NA	155218993	155213824	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155214474_155214567_155214685_155215053_155215163_155215562_155215652_155215761_155215788_155216383_155216622_155216856_155217030_155217239_155217374_155217963_155218050_155218387_155218480_155218847
H1_mix_00008785	chr1	-	11444	28	FSM	ENSG00000116539.14	ENST00000677213.1	11457	28	37	-24	-10	5	multi-exon	FALSE	canonical	1	2	junction_7	3.55825514799273	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGATGAGCTTGCTATTT	NA	False	NA	-5	True	ATTAAA	-25	NA	155563125	155335262	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_155337752_155338088_155338391_155339327_155339369_155341935_155342103_155343313_155343487_155343603_155343743_155344182_155344274_155346382_155346470_155347655_155347905_155349326_155349460_155349541_155349597_155352705_155352859_155354472_155354631_155357315_155357411_155357584_155357750_155360300_155360410_155370503_155370651_155370776_155370984_155378280_155378390_155378502_155378549_155380042_155380117_155395458_155395554_155415743_155415924_155438326_155439069_155459796_155459899_155477885_155482450_155521099_155521619_155563072
H1_mix_00008786	chr1	-	2505	10	NNC	ENSG00000163374.20	novel	3073	10	NA	NA	0	53243	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	117.352271198966	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGGGCATGGTGGCCAG	8537	False	NA	NA	False	AATACA	-31	NA	155680456	155606199	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_155606232_155659456_155660914_155661306_155661424_155668626_155668778_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415
H1_mix_00008787	chr1	-	2460	10	NIC	ENSG00000163374.20	novel	2654	11	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	3	21	junction_9	125.478639173721	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTGCAATTTGTTCAG	-21	True	NA	-1	True	AATAAA	-31	NA	155688692	155659443	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_155660914_155661306_155661424_155668626_155668718_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688658
H1_mix_00008788	chr1	-	3063	10	NIC	ENSG00000163374.20	novel	2626	11	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	27	junction_9	106.085919057254	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTGCAATTTGTTCAG	11	True	NA	-1	True	AATAAA	-31	NA	155688982	155659443	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_155661424_155668626_155668778_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688070_155688202_155688929
H1_mix_00008789	chr1	-	2670	11	NIC	ENSG00000163374.20	novel	2626	11	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	3	27	junction_10	104.6541446862	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTGCAATTTGTTCAG	11	True	NA	-1	True	AATAAA	-31	NA	155688982	155659443	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_155660914_155661306_155661424_155668626_155668778_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688070_155688202_155688929
H1_mix_00008792	chr1	-	4358	13	NNC	ENSG00000132680.11	novel	4499	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	22	junction_4	66.4834983703141	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGGTTTCTCTGTTT	-8	True	NA	-8	True	AATAAA	-14	NA	155934390	155913044	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_155915965_155916624_155916710_155917498_155917673_155921374_155921525_155921860_155921919_155923626_155923688_155925631_155925844_155926675_155926840_155927103_155927157_155929295_155929376_155929711_155929841_155933632_155933850_155934335
H1_mix_00008793	chr1	-	4182	22	NIC	ENSG00000116584.21	novel	4169	22	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_16	19.5962650890974	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGTACTGTCTTCCATAA	8	True	NA	-6	True	ATTAAA	-15	NA	155978533	155946853	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_155948016_155950268_155950483_155950828_155951273_155951482_155951534_155951740_155951777_155951918_155951987_155952115_155952236_155952627_155952829_155954901_155954970_155957712_155957883_155958319_155958397_155961660_155961910_155962104_155962223_155962592_155962719_155962932_155963184_155964987_155965129_155965302_155965413_155965630_155965761_155966415_155966480_155966819_155966888_155969155_155969301_155978364
H1_mix_00008795	chr1	-	711	5	FSM	ENSG00000163479.14	ENST00000472898.5	711	5	0	0	0	0	multi-exon	FALSE	canonical	3	1423	junction_4	180.040967560164	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTTGAGTAGATACCCAT	2	True	NA	NA	False	CATAAA	-21	NA	156020928	156011580	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156011888_156014960_156015070_156018269_156018369_156020012_156020168_156020887
H1_mix_00008796	chr1	-	1835	8	FSM	ENSG00000160781.17	ENST00000292291.10	1969	8	88	46	46	-45	multi-exon	FALSE	canonical	1	1	junction_7	17.0245920566067	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCCCTCCCACACTCCAT	5479	False	NA	36	True	NA	NA	NA	156247968	156243365	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156244404_156244760_156244912_156245141_156245239_156245534_156245662_156245781_156245988_156246122_156246251_156246680_156246757_156247956
H1_mix_00008799	chr1	-	2344	5	ISM	ENSG00000160781.17	ENST00000356983.7	1491	9	555	243	513	-243	intron_retention	FALSE	canonical	3	41	junction_2	7.94905654779232	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGTACCCAGGCCAAACAA	5946	False	NA	NA	False	NA	NA	NA	156247501	156244154	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_156244404_156244760_156244912_156245141_156245239_156245534_156245662_156245781
H1_mix_00008801	chr1	-	1247	2	FSM	ENSG00000198715.13	ENST00000480968.1	524	2	0	-723	0	125	multi-exon	FALSE	canonical	3	24	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCATTACCTTCCCTTCT	-1	True	NA	NA	False	NA	NA	NA	156291506	156289963	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156291107_156291402
H1_mix_00008802	chr1	-	357	2	NIC	ENSG00000198715.13	novel	543	3	NA	NA	6	-6	combination_of_known_splicesites	FALSE	canonical	3	31	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTCTTTTATAGCTGCAG	5	True	NA	-18	True	TATAAA	-11	NA	156291500	156290101	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_156290361_156291402
H1_mix_00008803	chr1	-	2048	15	FSM	ENSG00000163468.15	ENST00000368262.7	2048	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	1174.72006435229	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTCCATTTAGTTTGCTT	21	True	NA	-67	True	NA	NA	NA	156338247	156309013	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156309304_156310557_156310690_156310949_156311196_156312040_156312222_156317165_156317248_156317414_156317548_156318867_156319018_156320838_156321026_156324971_156325090_156333546_156333644_156334712_156334776_156334867_156334919_156335826_156335889_156337078_156337241_156338153
H1_mix_00008806	chr1	-	746	3	FSM	ENSG00000125462.19	ENST00000663987.1	780	3	37	-3	19	3	multi-exon	FALSE	canonical	2	7	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATCTGTTTACATTTGA	757	False	NA	NA	False	AATAAA	-21	NA	156456594	156446163	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_156446574_156455627_156455722_156456352
H1_mix_00008807	chr1	-	5817	3	NIC	ENSG00000132688.11	novel	5568	4	NA	NA	1	2	intron_retention	FALSE	canonical	3	22	junction_1	2	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGACTCTTCTTTCCCCCA	1	True	NA	1	True	AATAAA	-22	NA	156677406	156668760	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_156673528_156675215_156675341_156676481
H1_mix_00008808	chr1	-	200	1	FSM	ENSG00000237842.2	ENST00000379752.5	1531	1	1357	-26	1357	26	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAGCACGTACTTAAATG	NA	False	NA	NA	False	TTTAAA	-7	NA	157059405	157059205	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_157059200_157059400
H1_mix_00008809	chr1	-	472	1	FSM	ENSG00000237842.2	ENST00000379752.5	1531	1	735	324	735	-324	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTCCTAAAAATCCTGAG	NA	False	NA	NA	False	NA	NA	NA	157060027	157059555	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_157059600_157060000
H1_mix_00008810	chr1	-	2386	2	FSM	ENSG00000143297.19	ENST00000462218.1	2620	2	203	31	203	-30	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATTCATTCTAATAAACCA	NA	False	NA	NA	False	NA	NA	NA	157515870	157513407	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_157515765_157515841
H1_mix_00008811	chr1	-	2204	9	NNC	ENSG00000163568.15	novel	832	7	NA	NA	-41343	0	intron_retention	FALSE	canonical	1	1	junction_5	3.11999599358717	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGTCCCACTATCTCCT	NA	False	NA	NA	False	AATAAA	-18	NA	159188439	159062483	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_159062719_159063485_159063675_159065909_159066330_159068567_159068702_159073237_159073520_159122238_159122378_159123519_159123582_159132242_159132357_159187810
H1_mix_00008812	chr1	-	858	1	FSM	ENSG00000233473.2	ENST00000446414.2	663	1	-52	-143	-52	143	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAGTTATGTATTTTGTG	NA	False	NA	NA	False	GATAAA	-19	NA	159081847	159080989	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_159081000_159081800
H1_mix_00008813	chr1	-	4394	20	NIC	ENSG00000085552.18	novel	4059	21	NA	NA	-376	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	32.7696569330908	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGTGTTATCTGTCT	20	True	NA	-3	True	AATAAA	-17	NA	159945989	159927038	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_159927527_159927759_159927888_159928157_159929019_159929637_159929815_159929890_159929976_159930188_159930440_159930691_159930868_159931137_159931262_159931452_159931604_159931811_159931929_159932511_159932653_159934189_159934333_159934424_159934571_159934680_159934823_159936398_159936517_159936753_159936909_159937685_159937839_159942962_159943152_159943396_159943629_159945572
H1_mix_00008814	chr1	-	3820	15	NNC	ENSG00000132716.19	novel	4106	14	NA	NA	266	74868	intron_retention	TRUE	non_canonical	0	0	junction_1	235.517417788224	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGTGAAAGGGAGGAGAA	411	False	NA	NA	False	NA	NA	NA	160262141	160140846	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_160140877_160215720_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160261284_160261359_160262116
H1_mix_00008815	chr1	-	4023	14	NNC	ENSG00000132716.19	novel	4106	14	NA	NA	0	35018	intron_retention	FALSE	non_canonical	0	0	junction_1	232.313830790014	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGGAAGAAGGCAGAGTCA	145	False	NA	NA	False	NA	NA	NA	160262407	160180696	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_160180733_160215715_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160262116
H1_mix_00008816	chr1	-	359	1	FSM	ENSG00000224261.2	ENST00000453374.2	886	1	-24	551	-24	-551	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCAGCCTTCTGGGAGCC	NA	False	NA	NA	False	NA	NA	NA	160267249	160266890	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_160266900_160267200
H1_mix_00008817	chr1	-	4569	33	FSM	ENSG00000122218.16	ENST00000649787.1	4567	33	0	-2	0	0	multi-exon	FALSE	canonical	1	13	junction_15	163.820544799599	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGAGAGCTTCTTGACT	0	True	NA	-30	True	AATAAA	-3	NA	160343258	160289290	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_160290217_160290491_160290687_160291334_160291497_160291818_160291930_160292011_160292199_160292483_160292621_160293165_160293235_160293385_160293464_160294483_160294594_160294767_160294858_160295735_160295860_160296060_160296150_160297342_160297439_160297555_160297746_160298844_160298932_160299101_160299265_160305432_160305572_160305687_160305774_160306353_160306494_160307162_160307246_160309100_160309177_160310191_160310259_160311867_160312019_160313084_160313168_160313989_160314126_160323430_160323531_160325542_160325653_160332447_160332558_160333602_160333680_160335241_160335323_160339908_160339983_160340180_160340295_160343130
H1_mix_00008818	chr1	-	3700	11	NNC	ENSG00000158769.18	novel	4639	10	NA	NA	0	51360	intron_retention	FALSE	non_canonical	0	0	junction_1	415.916686368797	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGCCAGGCATTCCAATC	-2	True	NA	NA	False	NA	NA	NA	161021175	160943850	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_160943872_160996193_160998907_160999042_160999092_160999395_160999409_160999639_160999748_160999875_160999979_161000145_161000349_161000630_161000778_161001019_161001128_161001284_161001354_161021009
H1_mix_00008819	chr1	-	2096	13	FSM	ENSG00000270149.5	ENST00000289779.7	2096	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	583.810965172423	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGAGCTGGTGGCTTAGG	11	True	NA	NA	False	AAAAAG	-13	NA	161038944	160997956	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_160998907_160999042_160999092_160999395_160999409_160999639_160999748_160999875_160999979_161000145_161000349_161000630_161000778_161001019_161001128_161001284_161001354_161021009_161021113_161021387_161021488_161022749_161022828_161038879
H1_mix_00008820	chr1	-	1097	2	FSM	ENSG00000158773.14	ENST00000472217.1	1097	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	8309	False	NA	NA	False	NA	NA	NA	161040583	161039294	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161040010_161040201
H1_mix_00008822	chr1	-	510	5	NNC	ENSG00000158874.11	novel	474	4	NA	NA	0	38826	intron_retention	FALSE	non_canonical	0	0	junction_1	906.355614535487	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGGTGTGCTTGTGCAC	-2	True	NA	NA	False	NA	NA	NA	161223628	161183465	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_161183502_161222291_161222523_161222917_161223051_161223349_161223426_161223594
H1_mix_00008824	chr1	-	1386	2	FSM	ENSG00000158887.19	ENST00000488271.1	366	2	-58	-962	-58	2	multi-exon	FALSE	canonical	2	2	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCCTTGTCTAGAATTT	8019	False	NA	0	True	AATAAA	-20	NA	161306248	161304732	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161305978_161306107
H1_mix_00008825	chr1	-	386	1	FSM	ENSG00000236484.2	ENST00000436212.1	652	1	188	78	188	-78	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGTTGTATTGGGGACA	3300	False	NA	NA	False	NA	NA	NA	161379170	161378784	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_161378800_161379200
H1_mix_00008826	chr1	-	312	1	FSM	ENSG00000225487.2	ENST00000440329.2	312	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTAAGGGAAAGTCAATAA	NA	False	NA	NA	False	NA	NA	NA	164921629	164921317	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_164921300_164921600
H1_mix_00008827	chr1	-	3258	9	FSM	ENSG00000162761.14	ENST00000342310.7	3545	9	287	0	-187	0	multi-exon	FALSE	canonical	0	0	junction_1	1.05326872164704	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGTTTATTCAGGGGT	283	False	NA	NA	False	ATTAAA	-16	NA	165356428	165201866	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_165204041_165205863_165206035_165208062_165208133_165210698_165210777_165213640_165213814_165249407_165249641_165353075_165353263_165355483_165355582_165356354
H1_mix_00008829	chr1	-	1694	8	NNC	ENSG00000143183.18	novel	4468	7	NA	NA	0	20177	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	242.741485064726	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAACAGCACAAAGGTT	3	True	NA	NA	False	AAAAAG	-3	NA	165768837	165704115	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_165704145_165727010_165728122_165743166_165743312_165752101_165752170_165754227_165754275_165759524_165759585_165768191_165768270_165768681
H1_mix_00008830	chr1	-	415	1	FSM	ENSG00000213068.3	ENST00000450126.1	415	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTTCTGCAATACTGTAA	20	False	NA	NA	False	NA	NA	NA	167162837	167162422	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_167162400_167162800
H1_mix_00008831	chr1	-	1999	5	NNC	ENSG00000143162.9	novel	1969	4	NA	NA	0	1149	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	123.926137275395	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAGAGGGAGTAGCTCAG	0	True	NA	NA	False	AAAAAG	-2	NA	167553762	167539863	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_167539894_167541012_167542302_167546100_167546286_167548001_167548122_167553387
H1_mix_00008832	chr1	-	2178	7	NIC	ENSG00000143147.15	novel	2400	7	NA	NA	0	-4	combination_of_known_splicesites	FALSE	canonical	2	10	junction_6	39.1553175046364	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAAAAAAATCTA	7	True	NA	-22	True	NA	NA	NA	168136930	168085272	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_168085797_168087584_168087705_168090563_168090669_168096507_168097233_168104476_168104895_168114455_168114550_168136738
H1_mix_00008833	chr1	-	1723	3	NIC	ENSG00000143147.15	novel	8256	7	NA	NA	0	-13778	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTTGGTTTGTAGATGA	7	True	NA	-1	True	AATAAA	-18	NA	168136930	168104223	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_168104895_168134905_168135037_168136009
H1_mix_00008834	chr1	-	1589	12	FSM	ENSG00000143156.14	ENST00000472647.5	1590	12	1	0	1	0	multi-exon	FALSE	canonical	1	14	junction_11	106.645082182532	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTTTGGTTTATTTCAT	1	True	NA	NA	False	AATAAA	-18	NA	169367945	169132530	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_169132818_169169446_169169555_169230717_169230820_169235130_169235200_169237622_169237688_169287302_169287409_169298555_169298764_169303144_169303196_169309969_169310081_169323116_169323284_169324392_169324470_169367707
H1_mix_00008838	chr1	-	3054	14	FSM	ENSG00000000457.14	ENST00000367772.8	3090	14	36	0	-27	0	multi-exon	FALSE	canonical	0	0	junction_2	15.1169014701814	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTTATATCTGTTAGA	-2	True	NA	0	True	AATAAA	-32	NA	169893923	169853073	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_169853773_169854269_169854965_169855795_169855958_169859040_169859213_169862612_169862798_169864368_169864509_169866895_169866974_169868927_169869040_169870254_169870358_169873695_169873753_169875977_169876092_169878633_169878820_169888675_169888891_169893787
H1_mix_00008839	chr1	-	233	1	FSM	ENSG00000268062.1	ENST00000599419.1	203	1	30	-60	30	60	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAATTGCAATTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	171345277	171345044	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_171345000_171345300
H1_mix_00008840	chr1	-	4997	9	NNC	ENSG00000117533.15	novel	1738	9	NA	NA	0	2028	intron_retention	FALSE	non_canonical	0	0	junction_1	56.11762200949	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACATGGGTGCTGAAATCA	5	True	NA	NA	False	NA	NA	NA	171742060	171698131	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_171698157_171700159_171704535_171706366_171706419_171709664_171709745_171710713_171710815_171719170_171719222_171728523_171728571_171738348_171738464_171741909
H1_mix_00008841	chr1	-	4937	10	NNC	ENSG00000117533.15	novel	1738	9	NA	NA	0	2028	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	69.063756552448	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACATGGGTGCTGAAATCA	5	True	NA	NA	False	NA	NA	NA	171742060	171698131	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_171698157_171700159_171703398_171703457_171704535_171706366_171706419_171709664_171709745_171710713_171710815_171719170_171719222_171728523_171728571_171738348_171738464_171741909
H1_mix_00008842	chr1	-	648	3	NNC	ENSG00000117533.15	novel	4977	8	NA	NA	55	-27412	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	91	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTATTATTGTAAAATC	3085	False	NA	NA	False	ATTAAA	-19	NA	171742005	171731916	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_171732354_171738348_171738464_171741909
H1_mix_00008843	chr1	-	3348	3	FSM	ENSG00000117586.11	ENST00000281834.4	3492	3	144	0	144	0	multi-exon	FALSE	canonical	2	9	junction_2	0.5	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGAGAGTGTTGGAGTG	143	False	NA	1	True	AATAAA	-19	NA	173207187	173183730	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_173186866_173188520_173188570_173207023
H1_mix_00008844	chr1	-	695	12	FSM	ENSG00000234741.9	ENST00000454068.5	688	12	0	-7	0	0	multi-exon	FALSE	canonical	1	5	junction_11	855.359815062141	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTGGAGTGTGTAGTGT	172	False	NA	-15	True	AATAAA	-11	NA	173867815	173863903	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865228_173865283_173865470_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867721
H1_mix_00008845	chr1	-	590	12	FSM	ENSG00000234741.9	ENST00000689238.1	607	12	8	9	0	0	multi-exon	FALSE	canonical	3	1286	junction_5	594.739181671156	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTGGAGTGTGTAGTGT	0	True	NA	-15	True	AATAAA	-11	NA	173867987	173863903	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865228_173865283_173865509_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
H1_mix_00008847	chr1	-	1620	1	FSM	ENSG00000235869.1	ENST00000441426.1	334	1	-1207	-79	-1207	79	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAAGGGCAGAGTGAATG	8630	False	NA	NA	False	AATAAA	-22	NA	174923647	174922027	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_174922000_174923600
H1_mix_00008848	chr1	-	713	1	FSM	ENSG00000287697.1	ENST00000670650.1	1271	1	389	169	389	-169	mono-exon	FALSE	NA	NA	NA	NA	NA	256	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGGAATTTGCCCAGGTAA	740	False	NA	NA	False	NA	NA	NA	174999234	174998521	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_174998500_174999200
H1_mix_00008849	chr1	-	511	2	FSM	ENSG00000143207.21	ENST00000482305.1	450	2	-38	-23	-38	1	multi-exon	FALSE	canonical	3	520	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGCTTGGAAAGTTTTTG	1802	False	NA	-3	True	AATAAA	-39	NA	175947364	175944829	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_175945171_175947194
H1_mix_00008850	chr1	-	2838	9	NIC	ENSG00000242193.11	novel	2921	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	5.78791845139511	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTTATCCTCCTTTCTA	13	True	NA	NA	False	AATAAA	-18	NA	178037950	178006135	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_178008150_178022439_178022669_178026154_178026256_178031550_178031661_178032429_178032496_178033026_178033086_178034704_178034802_178037693_178037802_178037896
H1_mix_00008851	chr1	-	2556	2	FSM	ENSG00000242193.11	ENST00000481349.1	2556	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAATCCTCAG	1	True	NA	NA	False	NA	NA	NA	178037924	178035273	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_178037802_178037896
H1_mix_00008852	chr1	-	3486	11	FSM	ENSG00000143322.21	ENST00000367623.8	3486	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	1.67630546142402	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGTTAGCCTGGTGGGA	287	False	NA	-128	True	NA	NA	NA	179229397	179107717	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_179109442_179110281_179110456_179112308_179112399_179114877_179115031_179117331_179117517_179118586_179118765_179120189_179120275_179121594_179121868_179126376_179126673_179131310_179131482_179229240
H1_mix_00008854	chr1	-	7983	1	FSM	ENSG00000236539.3	ENST00000411857.2	9714	1	253	1478	253	-1478	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCTGTCTCTACAAAAAAT	332	False	NA	NA	False	NA	NA	NA	179457062	179449079	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_179449100_179457100
H1_mix_00008855	chr1	-	6680	6	NNC	ENSG00000169905.13	novel	7905	6	NA	NA	-5052	-1147	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	23.1119016958796	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTACAGAGAGCTAAATAAAG	156	False	NA	-44	True	AATATA	-19	NA	179882855	179841122	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_179846829_179847534_179847637_179850844_179851364_179852631_179852812_179877238_179877374_179882817
H1_mix_00008856	chr1	-	902	1	FSM	ENSG00000272906.1	ENST00000610272.1	989	1	81	6	81	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTTGTGATCCATTA	0	True	NA	NA	False	ATTAAA	-14	NA	179882514	179881612	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_179881600_179882500
H1_mix_00008857	chr1	-	1004	2	FSM	ENSG00000287808.1	ENST00000661321.1	1000	2	0	-4	0	4	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCAAGTGTTTTATAGTAT	11	True	NA	NA	False	AATAAA	-28	NA	182839561	182837180	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_182837935_182839311
H1_mix_00008858	chr1	-	999	1	FSM	ENSG00000176855.11	ENST00000453838.2	1332	1	-263	596	-263	-596	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTTGGAGGTAGATGCC	NA	False	NA	NA	False	AGTAAA	-33	NA	182960668	182959669	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_182959700_182960700
H1_mix_00008859	chr1	-	2379	3	FSM	ENSG00000162704.16	ENST00000462965.1	2455	3	76	0	76	0	multi-exon	FALSE	canonical	3	855	junction_1	51.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTCTCTGACTTTAACA	2019	False	NA	-23	True	AATAAA	-21	NA	183633882	183626193	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_183627595_183630460_183630638_183633081
H1_mix_00008861	chr1	-	6601	21	NNC	ENSG00000116406.20	novel	6678	21	NA	NA	1	50024	intron_retention	FALSE	non_canonical	0	0	junction_1	19.2963079370122	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAATCTGATGTAAAAAAC	-14	True	NA	NA	False	NA	NA	NA	184754857	184640212	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_184640247_184690505_184694473_184702810_184702997_184706642_184706809_184708152_184708345_184710393_184710548_184711722_184711878_184712432_184712599_184716887_184717013_184717539_184717624_184719161_184719246_184719442_184719569_184721288_184721387_184723750_184723857_184726254_184726390_184732836_184732991_184734530_184734644_184737024_184737065_184737610_184737712_184749546_184749593_184754488
H1_mix_00008862	chr1	-	893	1	FSM	ENSG00000213051.3	ENST00000392009.3	893	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACCAAACAATTTTCTAT	NA	False	NA	NA	False	NA	NA	NA	185227700	185226807	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_185226800_185227700
H1_mix_00008863	chr1	-	284	1	FSM	ENSG00000261024.7	ENST00000641809.1	378	1	-29	123	-29	-123	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGGTGAGTATTTCCAT	NA	False	NA	NA	False	NA	NA	NA	185333309	185333025	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_185333000_185333300
H1_mix_00008864	chr1	-	3737	2	Antisense	novelGene_ENSG00000143341.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGCTACATGAGAAACTG	NA	False	NA	NA	False	AATATA	-33	NA	185953946	185948233	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr1_-_185951640_185953615
H1_mix_00008865	chr1	-	3691	2	Antisense	novelGene_ENSG00000143341.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	NA	False	NA	NA	False	AATAAA	-18	NA	185953856	185948318	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr1_-_185951769_185953615
H1_mix_00008867	chr1	-	511	2	NNC	ENSG00000023572.10	novel	5612	5	NA	NA	-71266	-421	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCCTGGAAACTTTTTA	9233	False	NA	NA	False	ATTAAA	-7	NA	193177380	193091286	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_193091772_193177354
H1_mix_00008868	chr1	-	458	1	FSM	ENSG00000235748.1	ENST00000442280.1	560	1	57	45	57	-45	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGCTGAGCACCAATACAAA	7443	False	NA	NA	False	TATAAA	-31	NA	197139250	197138792	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_197138800_197139200
H1_mix_00008869	chr1	-	8323	23	FSM	ENSG00000213047.13	ENST00000620048.6	8365	23	42	0	-12	0	multi-exon	FALSE	canonical	1	5	junction_15	4.19858299591109	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCATGGTGATGACTCT	34	True	NA	NA	False	AATAAA	-17	NA	197775438	197504747	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_197510973_197511727_197511945_197512870_197512954_197539963_197540072_197540958_197541016_197545921_197545991_197546732_197546774_197553021_197553113_197583151_197583254_197595207_197595334_197607072_197607175_197611930_197611977_197617658_197617760_197642710_197642822_197645689_197645744_197647054_197647115_197652234_197652316_197658299_197658370_197672036_197672157_197674119_197674170_197715030_197715075_197772867_197772933_197775138
H1_mix_00008870	chr1	-	4895	3	NNC	ENSG00000162702.8	novel	4864	2	NA	NA	0	26109	intron_retention	FALSE	non_canonical	0	0	junction_1	60.5	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAAAACACTGATTG	-13	True	NA	NA	False	NA	NA	NA	200410036	200378830	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_200378866_200404950_200409720_200409945
H1_mix_00008872	chr1	-	6641	28	NIC	ENSG00000118193.12	novel	6838	29	NA	NA	37	-1	combination_of_known_splicesites	FALSE	canonical	1	5	junction_4	23.5975051574751	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCGTGGTCTATGCTTTT	9655	False	NA	-2	True	AATAAA	-20	NA	200618686	200551497	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_200553768_200554467_200554607_200555379_200555455_200559329_200559453_200565068_200565254_200565444_200565670_200569910_200570006_200575590_200575692_200580253_200580384_200581200_200581295_200586100_200586228_200589216_200589370_200590124_200590273_200592079_200592241_200593666_200593770_200598236_200598422_200600049_200600114_200600355_200600504_200601895_200602069_200603225_200603342_200603838_200603956_200605282_200605391_200605863_200605895_200606745_200606799_200608829_200608929_200614317_200614406_200615354_200615610_200617611
H1_mix_00008873	chr1	-	7289	31	NNC	ENSG00000118193.12	novel	7291	30	NA	NA	-16	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	23.3571307218065	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCGTGGTCTATGCTTTT	1	True	NA	-2	True	AATAAA	-20	NA	200620767	200551497	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_200552916_200552935_200553768_200554467_200554607_200555379_200555455_200559329_200559453_200560721_200560881_200565068_200565254_200565444_200565670_200569910_200570006_200575590_200575692_200580253_200580384_200581200_200581295_200586100_200586228_200589216_200589370_200590124_200590273_200592079_200592241_200593666_200593770_200598236_200598422_200600049_200600114_200600355_200600504_200601895_200602069_200603225_200603342_200603838_200603956_200605282_200605391_200605863_200605895_200606745_200606799_200608829_200608929_200614317_200614406_200615354_200615610_200617611_200618839_200620410
H1_mix_00008874	chr1	-	2026	2	FSM	ENSG00000232237.5	ENST00000449188.3	2036	2	0	10	0	-10	multi-exon	FALSE	canonical	0	0	junction_1	0	469	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTCCTAGATCATTGTC	NA	False	NA	-11	True	AATAAA	-17	NA	201127184	201113952	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_201115878_201127083
H1_mix_00008875	chr1	-	1667	6	NNC	ENSG00000116857.17	novel	507	6	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_5	569.065338955027	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTTCTGGTTTTTAAGA	65	False	NA	-6	True	ATTAAA	-15	NA	201154418	201134774	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_201135816_201143819_201143952_201146739_201146849_201151760_201151853_201153857_201153960_201154227
H1_mix_00008877	chr1	-	331	3	FSM	ENSG00000159166.15	ENST00000475136.1	331	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	110	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGAAATCTGACTCCTCG	3165	False	NA	NA	False	NA	NA	NA	201383208	201382283	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_201382327_201382652_201382806_201383073
H1_mix_00008878	chr1	-	4303	1	Genic_Genomic	ENSG00000159173.19	novel	NA	NA	NA	NA	14938	1290	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGGAGTGCAGTGCAGT	7782	False	NA	NA	False	GATAAA	-43	NA	201406780	201402477	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_-_201402500_201406800
H1_mix_00008879	chr1	-	7674	9	NNC	ENSG00000143858.12	novel	7635	9	NA	NA	-32	-2	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_6	4.82182538049648	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGGGGGTGGGGGGTGT	20	False	202710506	NA	False	ATTAAA	-17	NA	202710486	202590597	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_202596964_202599217_202599352_202600356_202600475_202601889_202602058_202602377_202602546_202602998_202603128_202604454_202604622_202605594_202605790_202710257
H1_mix_00008880	chr1	-	4605	5	FSM	ENSG00000117139.18	ENST00000647657.1	2019	5	845	-3431	0	-297	multi-exon	FALSE	canonical	3	921	junction_3	88.9364239218106	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAACAACAGAACAGATAAT	NA	False	NA	-22	True	TATAAA	-19	NA	202733427	202725183	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_202729174_202729706_202730028_202730908_202731064_202731827_202731940_202733400
H1_mix_00008883	chr1	-	635	6	FSM	ENSG00000159348.13	ENST00000446185.1	680	6	0	45	0	-45	multi-exon	FALSE	canonical	3	80	junction_3	9.26498785752038	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCACACTGCCAACTCGG	711	False	NA	NA	False	NA	NA	NA	202966560	202962970	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_202963166_202963641_202963728_202964611_202964696_202965370_202965501_202965886_202965994_202966527
H1_mix_00008884	chr1	-	2947	3	FSM	ENSG00000122176.12	ENST00000354955.5	2943	3	0	-4	0	4	multi-exon	FALSE	canonical	1	5	junction_2	3	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGAGTGGAGTCATTTAAA	5	True	NA	-1	True	AATAAA	-22	NA	203351122	203340623	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_203342495_203347291_203348278_203351032
H1_mix_00008885	chr1	-	420	1	FSM	ENSG00000232917.5	ENST00000479457.1	291	1	-1	-128	-1	128	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACAACATCAGTTGAGG	29	False	NA	-3	True	AATAAA	-24	NA	203904014	203903594	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_203903600_203904000
H1_mix_00008886	chr1	-	7422	23	NNC	ENSG00000143850.16	novel	5704	27	NA	NA	-9953	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_22	19.0588475365508	33	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGGTGTGTGTCTCCTA	53	False	NA	-19	True	AATAAA	-15	NA	204288342	204218852	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_204222780_204223461_204223586_204228727_204228862_204228936_204229105_204230412_204230590_204241374_204241482_204241684_204241815_204244863_204245004_204245614_204245727_204247364_204247461_204248820_204248971_204249183_204249265_204250545_204250615_204256801_204256889_204257352_204257870_204259257_204259741_204261305_204261509_204264941_204265043_204267474_204267548_204268207_204268313_204273625_204273741_204274728_204274810_204288100
H1_mix_00008887	chr1	-	2651	14	NNC	ENSG00000117222.14	novel	4290	14	NA	NA	10	-1577	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	20.2110169734378	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAATAACAGATTGGATA	-3	True	NA	NA	False	NA	NA	NA	205121956	205087718	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_205088813_205094986_205095065_205096681_205096912_205097325_205097396_205098988_205099107_205099740_205099813_205099910_205100065_205100151_205100272_205101599_205101710_205103856_205104020_205105027_205105169_205114788_205114962_205115857_205115884_205121854
H1_mix_00008888	chr1	-	2932	6	FSM	ENSG00000162873.15	ENST00000367155.8	2970	6	28	10	-16	-6	multi-exon	FALSE	canonical	1	1	junction_5	7.49399759807808	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTCATCAGGTGATAGTG	26	True	NA	-9	True	AATAAA	-36	NA	205356894	205336070	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_205337593_205338494_205338597_205339193_205339410_205339643_205339809_205343228_205343794_205356532
H1_mix_00008890	chr1	-	6055	8	NNC	ENSG00000069275.13	novel	6399	7	NA	NA	0	13525	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	30.6474355554009	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATAGTTCATTCCTTTTT	14	True	NA	NA	False	NA	NA	NA	205750182	205699296	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_205699324_205713192_205718480_205719526_205719677_205720500_205720654_205723925_205723982_205727699_205727806_205729571_205729622_205749956
H1_mix_00008891	chr1	-	6395	7	NNC	ENSG00000069275.13	novel	6399	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	28.0515398666257	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACACACTTGCATTCAATT	15	True	NA	-3	True	AATAAA	-21	NA	205750181	205712821	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_205718480_205719526_205719674_205720500_205720654_205723925_205723982_205727699_205727806_205729571_205729622_205749956
H1_mix_00008892	chr1	-	3147	6	NNC	ENSG00000117280.13	novel	1723	6	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_5	35.8942892393762	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGGTGGTTATTGGCCTT	19	True	NA	-11	True	AATAAA	-20	NA	205775449	205767984	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_205770454_205770732_205770855_205771471_205771654_205772495_205772568_205774832_205775087_205775401
H1_mix_00008893	chr1	-	3240	6	NNC	ENSG00000117280.13	novel	3308	6	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	41.7775059092809	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGGTGGTTATTGGCCTT	-1	True	NA	-11	True	AATAAA	-20	NA	205775469	205767984	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_205770454_205770732_205770855_205771471_205771654_205772495_205772568_205774832_205775087_205775328
H1_mix_00008894	chr1	-	964	3	FSM	ENSG00000162894.12	ENST00000474041.5	903	3	-21	-40	-21	40	multi-exon	FALSE	canonical	0	0	junction_2	1	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTAGTGAACGTCTACTT	7	True	NA	-86	True	TATAAA	-44	NA	206909966	206904484	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_206905148_206909461_206909521_206909724
H1_mix_00008895	chr1	-	2105	3	NIC	ENSG00000182795.13	novel	5501	4	NA	NA	71	-974	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	5.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGCTCTTGTTAGATGT	5	True	NA	-4	True	NA	NA	NA	207032685	207021668	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_207023481_207027493_207027680_207032578
H1_mix_00008896	chr1	-	516	2	NNC	ENSG00000232537.2	novel	755	3	NA	NA	-2547	1	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	0	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTGATTTGTTGCTTT	NA	False	NA	49	True	NA	NA	NA	209157648	209147218	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_209147595_209157508
H1_mix_00008898	chr1	-	221	1	FSM	ENSG00000283876.1	ENST00000583107.1	67	1	-215	61	-215	-61	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTTGGGGCATGGAGTC	9410	False	NA	NA	False	NA	NA	NA	209623725	209623504	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_209623500_209623700
H1_mix_00008901	chr1	-	1929	7	NIC	ENSG00000065600.13	novel	2469	8	NA	NA	17	133	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	50.4328486427469	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCCAGGGAAGGGTTTGT	0	True	NA	NA	False	NA	NA	NA	212414869	212364342	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_212365377_212377561_212377707_212379894_212380038_212385273_212385426_212386890_212387101_212410424_212410522_212414721
H1_mix_00008902	chr1	-	1893	7	NIC	ENSG00000065600.13	novel	2469	8	NA	NA	16	133	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	50.7589619892115	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCCAGGGAAGGGTTTGT	-1	True	NA	NA	False	NA	NA	NA	212414870	212364342	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_212365377_212375192_212375301_212379894_212380038_212385273_212385426_212386890_212387101_212410424_212410522_212414721
H1_mix_00008903	chr1	-	1790	6	NIC	ENSG00000065600.13	novel	2469	8	NA	NA	11	133	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	54.0125911246628	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCCAGGGAAGGGTTTGT	-6	True	NA	NA	False	NA	NA	NA	212414875	212364342	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_212365377_212379894_212380038_212385273_212385426_212386890_212387101_212410424_212410522_212414721
H1_mix_00008905	chr1	-	910	3	NNC	ENSG00000198468.10	novel	942	2	NA	NA	0	27466	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	35	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACCCACACAGAAAAA	8	True	NA	NA	False	NA	NA	NA	212858083	212824638	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_212824667_212856608_212857173_212857765
H1_mix_00008907	chr1	-	1823	2	FSM	ENSG00000198468.10	ENST00000651970.1	1814	2	0	-9	0	9	multi-exon	FALSE	canonical	3	8	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGAATTACCGTGAATAT	NA	False	NA	NA	False	AATAAA	-25	NA	212858126	212855459	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_212856922_212857765
H1_mix_00008909	chr1	-	459	2	Intergenic	novelGene_144	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	58	junction_1	0	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCGGGACTTGCTGCTAAG	1396	False	NA	NA	False	NA	NA	NA	212910981	212910480	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_-_212910590_212910631
H1_mix_00008910	chr1	-	7370	5	NNC	ENSG00000174606.14	novel	4323	8	NA	NA	-2658	65968	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	147.5957316456	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGCAGCCTCTAGTCAG	NA	False	NA	NA	False	NA	NA	NA	213004892	212926213	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_212926244_212992181_212995193_212997154_212997319_213000325_213000384_213000785
H1_mix_00008911	chr1	-	480	4	FSM	ENSG00000042781.14	ENST00000481786.1	626	4	0	146	0	-136	multi-exon	FALSE	canonical	1	3	junction_1	0.942809041582063	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCAATTAAATGGATTGCT	NA	False	NA	NA	False	AATGAA	-29	NA	216089139	216083515	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_216083587_216084697_216084878_216086718_216086821_216089012
H1_mix_00008912	chr1	-	625	1	ISM	ENSG00000215817.8	ENST00000651890.1	4769	2	3192	1319	3192	-1319	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACTTAGTGACTCCTTGA	NA	False	NA	NA	False	AAAAAG	-35	NA	219609953	219609328	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_219609300_219610000
H1_mix_00008913	chr1	-	205	2	Genic_Genomic	ENSG00000215817.8	novel	4769	2	NA	NA	19	-4598	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGAAATTGGATCTTACT	NA	False	NA	NA	False	AAGAAA	-9	NA	219613126	219612607	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr1_-_219612679_219612992
H1_mix_00008914	chr1	-	5231	12	NIC	ENSG00000143498.18	novel	1966	12	NA	NA	0	3421	combination_of_known_junctions	TRUE	canonical	1	6	junction_1	32.5784495011783	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACCTTTGATGGATGGTC	161	False	NA	NA	False	TTTAAA	-21	NA	222589759	222554480	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_222558269_222558622_222558773_222561363_222561519_222563172_222563297_222564058_222564126_222569509_222569669_222570534_222570666_222577444_222577644_222579758_222579891_222584127_222584298_222588442_222588566_222589726
H1_mix_00008915	chr1	-	3289	13	NNC	ENSG00000272645.4	novel	2975	13	NA	NA	0	0	intron_retention	TRUE	canonical	3	7	junction_5	16.5621724286265	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTATTTGGAGTGAGTTT	-11	True	NA	-6	True	NA	NA	NA	223992594	223951393	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_223952868_223954476_223954668_223961167_223961233_223962076_223962274_223962474_223962569_223964585_223964710_223973981_223974047_223976879_223977116_223982757_223983286_223984381_223984441_223986574_223986641_223988044_223988155_223992514
H1_mix_00008916	chr1	-	725	1	FSM	ENSG00000236773.1	ENST00000415453.1	231	1	-172	-322	-172	322	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAATGTAACCAA	76	False	NA	NA	False	AATAAA	-27	NA	224175878	224175153	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_224175200_224175900
H1_mix_00008917	chr1	-	551	4	FSM	ENSG00000162923.17	ENST00000479727.1	795	4	0	244	0	-244	multi-exon	FALSE	canonical	3	71	junction_2	4.32049379893857	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGTTAATTTCTCTCTGTA	NA	False	NA	NA	False	AAGAAA	-42	NA	224401019	224397970	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_224398227_224398514_224398594_224398888_224399035_224400949
H1_mix_00008918	chr1	-	910	4	NNC	ENSG00000233384.3	novel	3958	4	NA	NA	-91	-358	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6.12825877028341	37	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGCCCTCCTGACTTG	NA	False	NA	NA	False	NA	NA	NA	224616311	224611245	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_224611593_224615203_224615428_224615611_224615737_224616097
H1_mix_00008919	chr1	-	2525	4	Intergenic	novelGene_165	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_1	11.7851130197758	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTGAAATCTTTTTAC	17	False	NA	NA	False	AATAAA	-19	NA	224845769	224832478	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_-_224833536_224838681_224838972_224843637_224844582_224845535
H1_mix_00008920	chr1	-	13872	3	FSM	ENSG00000154380.18	ENST00000498108.5	713	3	-2422	-10737	-2422	143	multi-exon	FALSE	canonical	3	600	junction_1	53	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGCATTTCAGCCTGT	9331	False	NA	NA	False	NA	NA	NA	225503678	225486685	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_225497813_225498346_225498405_225500991
H1_mix_00008921	chr1	-	4126	14	NNC	ENSG00000154380.18	novel	13092	14	NA	NA	78	0	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_8	177.398658460735	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	284	False	NA	NA	False	NA	NA	NA	225653045	225495479	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_225497813_225498346_225498405_225500991_225501071_225507950_225508018_225511810_225511860_225512656_225512715_225512870_225513017_225514595_225514664_225517195_225517307_225519197_225519566_225530553_225530639_225554905_225555084_225567248_225567415_225652685
H1_mix_00008922	chr1	-	1656	5	NNC	ENSG00000243709.1	novel	1626	4	NA	NA	0	81286	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	653.517214769435	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	-1	True	NA	NA	False	NA	NA	NA	225889146	225804995	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_225805023_225886278_225887091_225887398_225887639_225887785_225888033_225888816
H1_mix_00008923	chr1	-	4613	25	NNC	ENSG00000196187.12	novel	4109	25	NA	NA	132	-45	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_24	53.5448928989083	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCTCCCTTCTGAGCAC	6897	False	NA	-41	True	AATATA	-28	NA	225882248	225846620	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_225846933_225847033_225847214_225848491_225848555_225848896_225849013_225849911_225850080_225852663_225852770_225853628_225853792_225855877_225855941_225856651_225856739_225856910_225857018_225859195_225859350_225860859_225860998_225862217_225862352_225862454_225862579_225862770_225862852_225865896_225865968_225866573_225866683_225867111_225867164_225867887_225868031_225871075_225871114_225871986_225872054_225874287_225874368_225877394_225877595_225879219_225879411_225880582
H1_mix_00008924	chr1	-	2240	5	NNC	ENSG00000143768.13	novel	2019	4	NA	NA	0	78283	intron_retention	FALSE	non_canonical	0	0	junction_1	1341.15572828065	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTCTGTATAGGTAATGA	-1	True	NA	NA	False	AAAACA	-3	NA	225941220	225858314	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_225858343_225936409_225937805_225939360_225939601_225939755_225940003_225940890
H1_mix_00008926	chr1	-	3737	13	NIC	ENSG00000183814.16	novel	3567	15	NA	NA	-240	1	combination_of_known_splicesites	FALSE	canonical	2	6	junction_5	41.1530848040446	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTCTATATTTTCATTT	NA	False	NA	0	True	AATAAA	-19	NA	226310109	226231155	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_226232607_226233095_226233194_226233343_226233524_226238970_226239097_226250838_226250920_226266212_226266333_226267956_226268091_226277774_226277933_226286332_226286459_226287663_226287798_226297718_226297814_226301172_226301206_226309108
H1_mix_00008927	chr1	-	3856	22	FSM	ENSG00000143799.14	ENST00000677203.1	3850	22	0	-6	0	0	multi-exon	FALSE	canonical	1	19	junction_9	619.89633029843	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTATTGCGTGTCTGG	-22	True	NA	-7	True	ATTAAA	-20	NA	226408100	226360690	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_226361542_226361968_226362084_226363098_226363161_226363942_226364071_226365001_226365155_226365953_226366053_226367479_226367609_226368198_226368322_226370433_226370518_226377107_226377304_226379141_226379275_226379572_226379642_226379921_226380165_226381067_226381209_226383035_226383184_226385503_226385681_226386325_226386443_226388655_226388756_226390409_226390625_226392198_226392315_226402213_226402380_226407809
H1_mix_00008928	chr1	-	203	1	FSM	ENSG00000177770.11	ENST00000460287.2	302	1	269	-170	269	170	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCAGTAGTTATCACTGT	NA	False	NA	NA	False	NA	NA	NA	226493220	226493017	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_226493000_226493200
H1_mix_00008929	chr1	-	296	1	FSM	ENSG00000236636.2	ENST00000420014.2	432	1	220	-84	220	84	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTACCTTGAAATTAAAAA	9007	False	NA	NA	False	NA	NA	NA	227264987	227264691	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_227264700_227265000
H1_mix_00008930	chr1	-	2498	6	FSM	ENSG00000081692.13	ENST00000438896.3	2502	6	4	0	4	0	multi-exon	FALSE	canonical	1	1	junction_1	48.6357892914261	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGCTTCATATGTGTCTG	NA	False	NA	-12	True	NA	NA	NA	227735407	227731233	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_227732677_227732928_227733028_227733413_227733682_227733906_227734033_227734650_227734817_227735011
H1_mix_00008931	chr1	-	2259	5	FSM	ENSG00000143793.13	ENST00000469781.5	2256	5	0	-3	0	3	multi-exon	FALSE	canonical	3	317	junction_2	31.736217480979	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGGAAGGTCAGTATCA	-1	True	NA	0	True	AATAAA	-25	NA	228103441	228100722	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_228101255_228101338_228102561_228102642_228102689_228102898_228103050_228103133
H1_mix_00008935	chr1	-	5145	2	FSM	ENSG00000269934.3	ENST00000602529.2	5172	2	27	0	6	0	multi-exon	FALSE	canonical	1	1	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTATTTATTGAGATCA	7	True	NA	NA	False	ATTAAA	-18	NA	228276039	228266340	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_228269206_228273759
H1_mix_00008939	chr1	-	371	1	FSM	ENSG00000213028.3	ENST00000434580.1	906	1	-113	648	-113	-648	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGACACAGTCCCAGTG	NA	False	NA	NA	False	NA	NA	NA	229690017	229689646	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_229689600_229690000
H1_mix_00008940	chr1	-	2483	6	FSM	ENSG00000143633.13	ENST00000318906.6	2483	6	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_4	33.3550595862157	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCTGTGACTGTTAAGT	-11	True	NA	-20	True	AATAAA	-17	NA	231241170	231223762	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_231225524_231226738_231226826_231226972_231227069_231229149_231229210_231238856_231239189_231241023
H1_mix_00008941	chr1	-	3108	4	FSM	ENSG00000135766.9	ENST00000667629.1	3108	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	49.4660377318508	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGTTATTTCCAGCTGT	9146	False	NA	-5	True	ATTAAA	-29	NA	231421192	231363750	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_231366476_231367568_231367637_231373979_231374100_231420997
H1_mix_00008942	chr1	-	1721	3	FSM	ENSG00000233461.6	ENST00000662999.1	1721	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	34.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTCAGGCGCGGTGGTT	-36	True	NA	NA	False	NA	NA	NA	231528618	231521276	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_231522721_231527337_231527416_231528419
H1_mix_00008943	chr1	-	6792	21	NIC	ENSG00000116991.12	novel	6914	23	NA	NA	-4	1	combination_of_known_splicesites	FALSE	canonical	2	14	junction_20	16.9542767465911	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTTGTCAGGTGACTAGA	14	True	NA	NA	False	AATAAA	-28	NA	232630113	232397963	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_232399274_232402391_232402474_232403447_232403572_232415493_232415626_232425588_232425809_232428410_232428565_232432246_232432472_232439107_232439497_232441290_232441395_232441767_232441869_232443601_232443686_232445528_232445787_232460886_232461162_232464839_232465417_232471370_232471529_232479626_232479731_232483791_232483967_232490873_232491063_232493526_232493661_232513856_232515609_232629868
H1_mix_00008944	chr1	-	1138	9	NIC	ENSG00000135749.19	novel	2183	17	NA	NA	83	11	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	31.8394409498659	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTATTCATTGTTCTT	NA	False	NA	NA	False	AATACA	-35	NA	233179091	233065449	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_233065662_233090060_233090191_233095754_233095864_233135012_233135191_233139713_233139856_233160282_233160434_233161270_233161364_233177801_233177899_233179065
H1_mix_00008945	chr1	-	914	2	NNC	ENSG00000251508.1	novel	324	2	NA	NA	8	1341	intron_retention	FALSE	canonical	2	3	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTTTCTGATTCTCCGC	8	True	NA	-11	True	AATAAA	-13	NA	233295719	233293983	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_233294504_233295325
H1_mix_00008949	chr1	-	4936	4	FSM	ENSG00000168243.11	ENST00000450593.5	4978	4	44	-2	44	0	multi-exon	FALSE	canonical	2	14	junction_3	406.244863215388	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGAATCCTACTTTTTTG	384	False	NA	-11	True	AATAAA	-24	NA	235650710	235547684	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_235552238_235583739_235583849_235595399_235595512_235650548
H1_mix_00008964	chr1	-	1914	11	NIC	ENSG00000185420.19	novel	1565	12	NA	NA	-10	412	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	83.6590700402533	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATAACTCCTTGTGTATG	-5	True	NA	NA	False	NA	NA	NA	246507322	245748929	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr1_-_245749665_245764040_245764150_245858495_245858671_245863798_245863887_245927930_245928034_245929869_245929938_246327200_246327338_246330479_246330538_246335366_246335475_246355030_246355095_246507053
H1_mix_00008966	chr1	-	729	6	NNC	ENSG00000185420.19	novel	1209	6	NA	NA	0	-13	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	88.8031530971733	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATGATGATTATTACCTC	-6	True	NA	NA	False	TATAAA	-32	NA	246507279	246325825	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr1_-_246325962_246327200_246327338_246330479_246330538_246335366_246335475_246355030_246355095_246507053
H1_mix_00008970	chr1	-	574	5	ISM	ENSG00000197472.15	ENST00000479214.5	885	6	64	22114	7	17662	5prime_fragment	FALSE	canonical	3	69	junction_1	35.7657308047802	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTCAGGTGGTTCTT	62	False	NA	NA	False	ATTAAA	-21	NA	247007992	246967660	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_246967793_246988120_246988256_246999347_246999441_246999947_247000075_247007905
H1_mix_00008971	chr1	-	2915	4	ISM	ENSG00000197472.15	ENST00000479214.5	885	6	61	40104	4	-328	5prime_fragment	FALSE	canonical	3	71	junction_2	33.4896335536171	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTAGACTGTTTGAAC	59	False	NA	-7	True	AATAAA	-22	NA	247007995	246985650	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr1_-_246988256_246999347_246999441_246999947_247000075_247007905
H1_mix_00008972	chr1	-	1951	4	FSM	ENSG00000188295.15	ENST00000343381.10	1951	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	18.1536650722535	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAATAAAAAAATAA	8024	False	NA	-38	True	NA	NA	NA	247104372	247099990	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr1_-_247101320_247101730_247101792_247101986_247102114_247103938
H1_mix_00008979	chr1	+	227	1	Intergenic	novelGene_3	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGGCAGCCACTCCCAG	NA	False	NA	NA	False	NA	NA	NA	5047002	5047229	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_5047000_5047200
H1_mix_00008980	chr1	+	302	1	Intergenic	novelGene_8	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGCAAAGAAAGTACACTCA	NA	False	NA	NA	False	NA	NA	NA	14975749	14976051	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_14975700_14976100
H1_mix_00008981	chr1	+	386	1	Intergenic	novelGene_11	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGTAGTAGGCCCGAGC	1869	False	NA	NA	False	NA	NA	NA	21429862	21430248	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_21429900_21430200
H1_mix_00008982	chr1	+	3055	1	Intergenic	novelGene_15	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCATTACACTCCAGCCT	NA	False	NA	NA	False	NA	NA	NA	23328586	23331641	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_23328600_23331600
H1_mix_00008983	chr1	+	278	1	Intergenic	novelGene_16	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTCTGAGAGTAAATGAAGG	NA	False	NA	NA	False	NA	NA	NA	23928027	23928305	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_23928000_23928300
H1_mix_00008984	chr1	+	975	1	Intergenic	novelGene_26	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTCAGTGTTTTACATA	745	False	NA	68	True	NA	NA	NA	35117890	35118865	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_35117900_35118900
H1_mix_00008985	chr1	+	285	1	Intergenic	novelGene_43	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACGTAGCCTAGTAAATT	5492	False	NA	NA	False	NA	NA	NA	58629912	58630197	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_58629900_58630200
H1_mix_00008986	chr1	+	338	1	Intergenic	novelGene_49	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	389	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTAAGGCAGGCGTCCCTG	NA	False	NA	NA	False	NA	NA	NA	64354550	64354888	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_64354600_64354900
H1_mix_00008987	chr1	+	296	1	Intergenic	novelGene_50	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTGTCCATTTTGACT	NA	False	NA	NA	False	NA	NA	NA	64431446	64431742	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_64431400_64431700
H1_mix_00008988	chr1	+	356	1	Intergenic	novelGene_54	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGCCTTTTAAGGCCTAT	2621	False	NA	NA	False	ATTAAA	-26	NA	68388958	68389314	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_68389000_68389300
H1_mix_00008989	chr1	+	210	1	Intergenic	novelGene_59	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGCTGAGCTTGGTGAGG	NA	False	NA	NA	False	NA	NA	NA	72988779	72988989	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_72988800_72989000
H1_mix_00008990	chr1	+	235	1	Intergenic	novelGene_71	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTGAAATCTTTTTTATA	2631	False	NA	NA	False	NA	NA	NA	81504219	81504454	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_81504200_81504500
H1_mix_00008991	chr1	+	278	1	Intergenic	novelGene_82	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAGATTGAAGATTTAAGA	NA	False	NA	NA	False	NA	NA	NA	109081336	109081614	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_109081300_109081600
H1_mix_00008992	chr1	+	213	1	Intergenic	novelGene_91	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTCTATTTTCCTACAAG	NA	False	NA	NA	False	NA	NA	NA	114915261	114915474	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_114915300_114915500
H1_mix_00008993	chr1	+	308	1	Intergenic	novelGene_92	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAACACTTTAAGTGAATG	NA	False	NA	NA	False	NA	NA	NA	115928498	115928806	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_115928500_115928800
H1_mix_00008994	chr1	+	1444	1	Intergenic	novelGene_95	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGCCTGGGTTCTAAGG	172	False	NA	NA	False	NA	NA	NA	120557527	120558971	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_120557500_120559000
H1_mix_00008995	chr1	+	276	1	Intergenic	novelGene_97	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAAAGAATGTATTTGTG	NA	False	NA	NA	False	ATTAAA	-9	NA	144319255	144319531	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_144319300_144319500
H1_mix_00008996	chr1	+	1033	1	Intergenic	novelGene_105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAAAATCAAGATTATGT	NA	False	NA	NA	False	AATGAA	-37	NA	146953712	146954745	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_146953700_146954700
H1_mix_00008997	chr1	+	319	1	Intergenic	novelGene_106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACAAAAAAACAAAAAAA	158	False	NA	NA	False	NA	NA	NA	148771877	148772196	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_148771900_148772200
H1_mix_00008998	chr1	+	1185	1	Intergenic	novelGene_110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTGTCTTAAAAAGAAAAAA	1937	False	NA	NA	False	NA	NA	NA	150617779	150618964	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_150617800_150619000
H1_mix_00009000	chr1	+	283	1	Intergenic	novelGene_118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGGCTA	NA	False	NA	NA	False	AATAAA	-3	NA	167709384	167709667	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_167709400_167709700
H1_mix_00009001	chr1	+	3156	1	Intergenic	novelGene_121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAAAATCTTTCAGTGGC	NA	False	NA	NA	False	TATAAA	-38	NA	173794848	173798004	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_173794800_173798000
H1_mix_00009003	chr1	+	933	1	Intergenic	novelGene_130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAGAGTCAGCGAAGA	NA	False	NA	NA	False	NA	NA	NA	195847292	195848225	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_195847300_195848200
H1_mix_00009004	chr1	+	297	1	Intergenic	novelGene_139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAATGTTTTTTATTTTC	NA	False	NA	NA	False	NA	NA	NA	211247020	211247317	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_211247000_211247300
H1_mix_00009005	chr1	+	498	1	Intergenic	novelGene_140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCACATAAGCATACTTTT	109	False	NA	NA	False	AATAAA	-27	NA	212589937	212590435	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_212589900_212590400
H1_mix_00009006	chr1	+	305	1	Intergenic	novelGene_148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCATTTCTTCCGTTCTGT	2448	False	NA	NA	False	NA	NA	NA	212912926	212913231	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_212912900_212913200
H1_mix_00009008	chr1	+	488	1	Intergenic	novelGene_161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAAAGGAAACAGGCCCTT	NA	False	NA	NA	False	NA	NA	NA	221975718	221976206	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_221975700_221976200
H1_mix_00009009	chr1	+	354	1	Intergenic	novelGene_162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACAGAGGCTAGGAAGGGA	NA	False	NA	NA	False	NA	NA	NA	221976937	221977291	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_221976900_221977300
H1_mix_00009010	chr1	+	2459	1	Intergenic	novelGene_181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGGAGGTACTGAGGATA	NA	False	NA	NA	False	AGTAAA	-40	NA	233683483	233685942	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_+_233683500_233685900
H1_mix_00009014	chr10	+	4169	14	NIC	ENSG00000015171.20	novel	4229	15	NA	NA	-104	1	combination_of_known_junctions	FALSE	canonical	3	44	junction_3	51.3247002141367	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTTTAGTAATTTGTTTA	-10	True	NA	23	True	AATAAA	-17	NA	134964	254635	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_135303_179993_180129_209888_210049_236837_236916_237584_237678_239437_239526_240055_240112_240892_240971_242020_242140_246765_246974_247397_247467_248335_248609_248902_249089_252347
H1_mix_00009015	chr10	+	4229	15	FSM	ENSG00000015171.20	ENST00000381591.5	4229	15	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	41.9944116787567	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTAGTAATTTGTTTATT	-14	True	NA	25	True	AATAAA	-19	NA	135068	254637	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_135303_179993_180129_209888_210049_221194_221357_236837_236916_237584_237678_239437_239526_240055_240112_240892_240971_242020_242140_246765_246974_247397_247467_248335_248609_248902_249089_252347
H1_mix_00009016	chr10	+	4272	16	NIC	ENSG00000015171.20	novel	4229	15	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	69.0020933659906	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTTTAGTAATTTGTTTA	-14	True	NA	23	True	AATAAA	-17	NA	135068	254635	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_135303_179993_180129_209888_210049_218454_218500_221194_221357_236837_236916_237584_237678_239437_239526_240055_240112_240892_240971_242020_242140_246765_246974_247397_247467_248335_248609_248902_249089_252347
H1_mix_00009017	chr10	+	4099	15	FSM	ENSG00000015171.20	ENST00000381604.9	4100	15	0	1	0	-1	multi-exon	FALSE	canonical	3	111	junction_1	32.3356914071048	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTTAGTAATTTGTTTAT	1	True	NA	24	True	AATAAA	-18	NA	135454	254636	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_135560_179993_180129_209888_210049_221194_221357_236837_236916_237584_237678_239437_239526_240055_240112_240892_240971_242020_242140_246765_246974_247397_247467_248335_248609_248902_249089_252347
H1_mix_00009019	chr10	+	3921	14	FSM	ENSG00000015171.20	ENST00000381607.8	3898	14	-23	0	6	0	multi-exon	FALSE	canonical	3	44	junction_3	43.2961454752932	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAACTAGCTTTAGTA	7	True	NA	14	True	AATAAA	-8	NA	135460	254626	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_135560_179993_180129_209888_210049_236837_236916_237584_237678_239437_239526_240055_240112_240892_240971_242020_242140_246765_246974_247397_247467_248335_248609_248902_249089_252347
H1_mix_00009024	chr10	+	4801	14	NIC	ENSG00000047056.17	novel	4933	16	NA	NA	-19	92	combination_of_known_splicesites	FALSE	canonical	3	25	junction_9	11.0838653458943	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTGCAGTAAGCTTGTT	4	True	NA	NA	False	AATAAA	-15	NA	1056827	1132476	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_1056969_1072115_1072294_1077906_1078004_1080010_1080107_1080411_1080477_1084402_1084539_1086285_1086358_1093451_1093497_1096169_1096247_1103598_1103837_1105125_1105268_1124217_1124353_1124909_1125025_1129212
H1_mix_00009027	chr10	+	8911	6	FSM	ENSG00000067057.18	ENST00000381072.5	1698	6	-7213	0	-7213	0	multi-exon	FALSE	canonical	3	485	junction_4	85.1257892768108	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCCAACAGTCCTCTGT	193	False	NA	25	True	ATTAAA	-11	NA	3121793	3136793	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_3129984_3132379_3132442_3133202_3133315_3134482_3134583_3135735_3135839_3136449
H1_mix_00009028	chr10	+	456	4	FSM	ENSG00000067057.18	ENST00000433193.2	456	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	297.017769763958	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAAGCAGAGGTTAAGTCA	NA	False	NA	17	True	AATAAA	-28	NA	3133234	3137715	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_3133315_3134482_3134583_3135735_3135839_3137542
H1_mix_00009040	chr10	+	8732	24	FSM	ENSG00000108021.20	ENST00000645567.1	8732	24	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	48.2650605309154	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTAAAAATAATCTCTTTC	-2	True	NA	-7	True	AATAAA	-4	NA	5692815	5763728	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_5692919_5709529_5709664_5712393_5712540_5712822_5712919_5714134_5714208_5717658_5717751_5720543_5720669_5720754_5720775_5720870_5720971_5723676_5723778_5724429_5724534_5726884_5726958_5727060_5727124_5730486_5731204_5735303_5735547_5739617_5740498_5742096_5742527_5746178_5750028_5756612_5756739_5757519_5757674_5758886_5758993_5761289_5761472_5762531_5762647_5763028
H1_mix_00009042	chr10	+	3648	22	FSM	ENSG00000134452.20	ENST00000397269.7	3640	22	-8	0	-8	0	multi-exon	TRUE	canonical	2	13	junction_17	71.2731006431139	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGCTGTGTGATGTCTGCG	598	False	NA	9	True	ATTAAA	-22	NA	5890194	5937594	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_5890347_5903019_5903176_5906036_5906633_5908924_5909056_5909158_5909295_5910937_5911129_5913746_5913840_5914177_5914270_5915402_5915572_5916233_5916457_5917419_5917508_5917589_5917677_5918341_5918479_5921257_5921358_5921447_5921570_5923620_5923697_5924310_5924509_5924750_5924802_5925366_5925493_5927434_5927542_5936455_5936588_5937109
H1_mix_00009044	chr10	+	3410	20	NIC	ENSG00000134452.20	novel	3548	21	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	49.3604527291719	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCGCTGTGTGATGTCTGC	-18	True	NA	8	True	ATTAAA	-21	NA	5890224	5937593	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_5890347_5906036_5906633_5908924_5909056_5909158_5909295_5910937_5911129_5913746_5913840_5914177_5914270_5915402_5915572_5916233_5916457_5917419_5917508_5917589_5917677_5918341_5918479_5921257_5921358_5921447_5921570_5923620_5923697_5924310_5924509_5925366_5925493_5927434_5927542_5936455_5936588_5937109
H1_mix_00009049	chr10	+	914	3	FSM	ENSG00000134453.16	ENST00000465906.5	914	3	0	0	0	0	multi-exon	FALSE	canonical	3	879	junction_2	28.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTCAAGTGCTTCAATGA	NA	False	NA	108	True	NA	NA	NA	6113362	6115834	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_6113582_6114048_6114148_6115238
H1_mix_00009053	chr10	+	4482	15	FSM	ENSG00000170525.21	ENST00000379775.9	4482	15	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	14.5386536164664	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACGAAGTAAACCTCTGG	-1	True	NA	74	True	AATAAA	-19	NA	6202931	6235532	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_6203337_6213622_6213749_6215220_6215318_6216124_6216192_6216705_6216781_6217134_6217192_6219568_6219694_6220657_6220866_6221380_6221528_6221640_6221746_6222854_6222985_6223957_6224021_6224148_6224214_6226191_6226366_6232894
H1_mix_00009054	chr10	+	2050	2	FSM	ENSG00000237943.8	ENST00000663449.1	2050	2	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCGGTGTCAATTACTAT	16	True	NA	NA	False	AATGAA	-44	NA	6580505	6585303	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_6580928_6583675
H1_mix_00009055	chr10	+	1269	3	FSM	ENSG00000237943.8	ENST00000613651.2	1263	3	-6	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	8	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAGAAAATAGCTCTAAAC	0	True	NA	NA	False	AAAAAG	-28	NA	6580555	6584508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_6580928_6582137_6582202_6583675
H1_mix_00009056	chr10	+	786	3	NIC	ENSG00000237943.8	novel	1133	2	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_2	50	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTCTAGTGTCAATTTA	11	False	NA	11	True	AATAAA	-16	NA	6580566	6584299	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_6580928_6583675_6583919_6584117
H1_mix_00009069	chr10	+	2650	6	FSM	ENSG00000107485.18	ENST00000346208.4	2650	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	43.0655314607866	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGGTGGTTGTGCTCGGA	-7	True	NA	21	True	AATAAA	-21	NA	8054809	8074890	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_8054892_8055286_8055897_8058304_8058842_8063995_8064139_8069472_8069599_8073738
H1_mix_00009092	chr10	+	3411	14	NIC	ENSG00000123240.17	novel	3488	16	NA	NA	-51	47	combination_of_known_junctions	FALSE	canonical	3	29	junction_5	27.9202160009277	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTTCAATAAGAATCAAAAT	-27	True	NA	71	True	NA	NA	NA	13100107	13138355	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_13100303_13109111_13109289_13110273_13110477_13112452_13112636_13116266_13116341_13118905_13119041_13122384_13122488_13123994_13124111_13125417_13125568_13125945_13126040_13127744_13127904_13132066_13132198_13133501_13133582_13136744
H1_mix_00009094	chr10	+	4571	20	FSM	ENSG00000065328.17	ENST00000378714.8	4549	20	-22	0	-22	0	multi-exon	TRUE	canonical	3	211	junction_4	35.3722585637428	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTAGTTTTGCTCAATC	NA	False	NA	19	True	AATAAA	-19	NA	13161535	13211110	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_13161607_13164127_13164210_13170921_13171264_13172375_13172481_13172627_13172766_13175509_13175682_13180441_13180608_13182932_13183101_13186163_13186281_13188880_13189081_13191298_13191400_13192254_13192366_13192450_13192569_13195040_13195270_13197622_13197768_13198688_13198808_13201420_13201535_13204218_13204365_13209090_13209134_13209226
H1_mix_00009095	chr10	+	4587	18	FSM	ENSG00000065328.17	ENST00000378694.1	4587	18	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_3	35.2936274475762	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCACTTCTTAGTTTTGC	2562	False	NA	13	True	AATAAA	-13	NA	13164127	13211104	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_13164210_13170921_13171264_13172375_13172481_13172627_13172766_13175509_13175682_13180441_13180608_13182932_13183101_13186163_13186281_13188880_13189081_13191298_13191400_13192254_13192366_13192450_13192569_13195040_13195270_13197622_13197768_13198688_13198808_13201420_13201535_13204218_13204365_13209090
H1_mix_00009107	chr10	+	1307	6	FSM	ENSG00000152455.16	ENST00000378325.7	1292	6	-15	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	76.9716831048925	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTCAGCTTCATTTCG	-18	True	NA	9	True	ATTAAA	-9	NA	14878847	14903085	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_14878920_14881499_14881646_14896845_14896978_14899538_14899686_14901132_14901263_14902405
H1_mix_00009108	chr10	+	3077	6	FSM	ENSG00000152455.16	ENST00000354919.11	3059	6	-18	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	70.9608342679256	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	-18	True	NA	NA	False	NA	NA	NA	14878847	14904315	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_14878920_14881499_14881646_14896845_14897518_14899538_14899686_14901132_14901263_14902405
H1_mix_00009113	chr10	+	1653	3	FSM	ENSG00000152464.15	ENST00000378197.5	1484	3	-175	6	0	0	multi-exon	FALSE	canonical	3	37	junction_1	45	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGATTCATAGGGTCCTG	-11	True	NA	8	True	AATAAA	-15	NA	15097179	15104251	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_15097767_15102217_15102337_15103304
H1_mix_00009124	chr10	+	4205	8	ISM	ENSG00000165995.23	ENST00000617363.4	4385	13	252628	757	111434	42	3prime_fragment	FALSE	canonical	1	1	junction_1	3.18157963590287	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCACTTCAATTTCTAACC	274	False	NA	5	True	AATAAA	-14	NA	18513396	18541105	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_+_18515042_18518335_18518417_18518909_18518969_18527587_18527698_18534075_18534228_18536100_18536197_18538179_18538366_18539229
H1_mix_00009133	chr10	+	5138	23	NIC	ENSG00000078403.17	novel	4850	22	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	27.8533645607738	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTCCGTGCCATTCTCA	-37	True	NA	11	True	AATAAA	-15	NA	21534206	21743626	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_21534495_21534644_21534805_21538832_21538913_21586293_21586349_21595330_21595441_21612347_21612452_21614830_21614925_21617111_21617208_21651672_21651769_21670448_21670705_21673349_21673920_21681331_21681377_21682224_21682258_21713771_21713951_21726243_21726356_21727855_21727929_21730899_21731055_21732898_21733088_21733503_21733593_21733767_21734130_21735138_21735236_21740029_21740237_21741938
H1_mix_00009134	chr10	+	1069	4	FSM	ENSG00000078403.17	ENST00000377100.8	1069	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	31.0948370133836	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGCCTACTGTGTTGTT	-12	True	NA	18	True	AATAAA	-20	NA	21534231	21557182	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_21534521_21534644_21534805_21538832_21538913_21556642
H1_mix_00009135	chr10	+	5143	23	FSM	ENSG00000078403.17	ENST00000307729.12	5143	23	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_13	26.6040759941805	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGTGCCATTCTCATTTG	-12	True	NA	15	True	AATAAA	-19	NA	21534231	21743630	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_21534521_21534644_21534805_21538832_21538913_21586293_21586349_21595330_21595441_21612347_21612452_21614830_21614925_21617111_21617208_21651672_21651769_21670448_21670705_21673349_21673920_21681331_21681377_21682224_21682258_21713771_21713951_21726243_21726356_21727855_21727929_21730899_21731055_21732898_21733088_21733503_21733593_21733767_21734130_21735138_21735236_21740029_21740237_21741938
H1_mix_00009136	chr10	+	4999	22	NIC	ENSG00000078403.17	novel	5143	23	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	28.1870171623025	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGTGCCATTCTCATTTG	-21	True	NA	15	True	AATAAA	-19	NA	21534316	21743630	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_21534495_21534644_21534805_21538832_21538913_21586293_21586349_21595330_21595441_21612347_21612452_21614830_21614925_21617111_21617208_21651672_21651769_21670448_21670705_21673349_21673920_21681331_21681377_21713771_21713951_21726243_21726356_21727855_21727929_21730899_21731055_21732898_21733088_21733503_21733593_21733767_21734130_21735138_21735236_21740029_21740237_21741938
H1_mix_00009137	chr10	+	4953	24	NIC	ENSG00000078403.17	novel	5203	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	30.8093718096353	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTCCGTGCCATTCTCA	66	False	NA	11	True	AATAAA	-15	NA	21534439	21743626	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_21534495_21534644_21534805_21538832_21538913_21586293_21586349_21595330_21595441_21612347_21612452_21614830_21614925_21617111_21617208_21651672_21651769_21670448_21670705_21673349_21673920_21681331_21681377_21682224_21682258_21688490_21688539_21713771_21713951_21726243_21726356_21727855_21727929_21730899_21731055_21732898_21733088_21733503_21733593_21733767_21734130_21735138_21735236_21740029_21740237_21741938
H1_mix_00009140	chr10	+	2293	5	FSM	ENSG00000148444.16	ENST00000602574.5	2290	5	-3	0	-3	0	multi-exon	FALSE	canonical	3	90	junction_4	3.49106001094224	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGATGATATTTTGTTTG	-27	True	NA	13	True	AATAAA	-22	NA	22316382	22320306	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_22316557_22317883_22317996_22318104_22318169_22318271_22318714_22318805
H1_mix_00009148	chr10	+	7619	20	NIC	ENSG00000120549.18	novel	7407	21	NA	NA	30	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_2	7.14666301456612	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTTTTTTTCTTTTGA	26	False	NA	NA	False	AATAAA	-13	NA	24208820	24547843	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_24209264_24219625_24219910_24380868_24381068_24432994_24433194_24438385_24438480_24473227_24474061_24495146_24495197_24501378_24501546_24513258_24513435_24520122_24520254_24521781_24521930_24524322_24524765_24527935_24528120_24531829_24531994_24533069_24533238_24536773_24536894_24542692_24542771_24542882_24544482_24544980_24545104_24545826
H1_mix_00009152	chr10	+	3737	3	FSM	ENSG00000185875.13	ENST00000376356.5	3737	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGTAATGGACTACTGT	-19	True	NA	NA	False	ATTAAA	-16	NA	25016611	25026664	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_25016693_25021741_25021909_25023175
H1_mix_00009158	chr10	+	4132	12	FSM	ENSG00000120539.15	ENST00000375940.9	4132	12	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_8	51.6179544649001	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATCTGTCAACATCATT	-4	True	NA	6	True	AATAAA	-18	NA	27155351	27187953	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_27155613_27158548_27158687_27159618_27159759_27161093_27161183_27165063_27165171_27165388_27165540_27167101_27167275_27169943_27171084_27173117_27173260_27180952_27181067_27181479_27181582_27186378
H1_mix_00009159	chr10	+	1299	7	ISM	ENSG00000120539.15	ENST00000342386.10	2968	11	9	19383	9	-19177	5prime_fragment	FALSE	canonical	3	224	junction_2	24.4909280256089	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGGTGGACCTCACTTGT	23	False	NA	13	True	AATAAA	-18	NA	27155378	27167541	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_+_27155613_27158548_27158687_27159618_27159759_27161093_27161183_27165063_27165171_27165388_27165540_27167101
H1_mix_00009162	chr10	+	4899	7	FSM	ENSG00000099246.18	ENST00000356940.11	4875	7	-24	0	0	0	multi-exon	FALSE	canonical	3	625	junction_5	77.9886031559883	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGACTTGGATTTTCTTTT	NA	False	NA	13	True	AATAAA	-22	NA	27504279	27542239	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_27504438_27509874_27509931_27526827_27526890_27532506_27532580_27533734_27533854_27533927_27533995_27537875
H1_mix_00009163	chr10	+	3231	8	FSM	ENSG00000099246.18	ENST00000682181.1	3231	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	341.242447774695	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTCTGAGTAATAGTTAA	14	True	NA	-2	True	AATAAA	-10	NA	27504313	27540150	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_27504438_27509874_27509931_27513965_27514421_27526827_27526890_27532506_27532580_27533734_27533854_27533927_27533995_27537875
H1_mix_00009165	chr10	+	4963	2	FSM	ENSG00000099246.18	ENST00000682777.1	6518	2	1352	203	-193	-203	multi-exon	FALSE	canonical	3	672	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCATATGCTCTTTCTGC	1205	False	NA	NA	False	NA	NA	NA	27533734	27542578	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_27533995_27537875
H1_mix_00009167	chr10	+	3788	14	NIC	ENSG00000095787.24	novel	5912	14	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	137	junction_11	109.587067867459	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTATAAAATTACCTTGAC	-18	True	NA	NA	False	AATAAA	-16	NA	28533112	28620986	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_28533621_28533997_28534035_28535561_28535758_28583398_28583506_28589735_28589852_28590719_28590833_28595732_28596042_28608185_28608432_28610698_28610822_28611773_28611923_28614566_28614686_28616175_28616363_28617656_28617785_28619536
H1_mix_00009169	chr10	+	2839	13	FSM	ENSG00000095787.24	ENST00000347934.8	2839	13	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_6	116.639639726619	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTATTTTTCTTTTCCTT	-23	True	NA	NA	False	AATAAA	-21	NA	28533312	28620543	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_28533621_28533997_28534035_28535561_28535758_28583398_28583506_28589735_28589852_28590719_28590833_28608185_28608432_28610698_28610822_28611773_28611923_28614566_28614686_28616172_28616363_28617656_28617785_28619536
H1_mix_00009171	chr10	+	5454	14	FSM	ENSG00000095787.24	ENST00000442148.6	5554	14	-1	101	-1	-101	multi-exon	FALSE	canonical	3	12	junction_1	135.416997875486	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTGCAGTTATTTCAGA	30	False	NA	4	True	AATAAA	-14	NA	28533747	28623011	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_28533894_28533997_28534035_28535561_28535758_28583398_28583506_28589735_28589852_28590719_28590833_28595732_28596042_28608185_28608432_28610698_28610822_28611773_28611923_28614566_28614686_28616172_28616363_28617656_28617785_28619536
H1_mix_00009178	chr10	+	2850	9	FSM	ENSG00000107968.10	ENST00000263056.6	2850	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	5.40688218847054	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGTGAAGCCTGTGAT	-1	True	NA	4	True	AATAAA	-18	NA	30434183	30461833	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_30434379_30437175_30437407_30438915_30439275_30447781_30447950_30450257_30450520_30451637_30451745_30458083_30458237_30459254_30459502_30460705
H1_mix_00009183	chr10	+	1022	3	FSM	ENSG00000095794.20	ENST00000489388.5	1022	3	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	62.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAGCAATTGGATAGATA	53	False	NA	-68	True	TTTAAA	-1	NA	35126905	35179769	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_35127194_35178888_35178987_35179133
H1_mix_00009185	chr10	+	747	5	FSM	ENSG00000095794.20	ENST00000461968.5	747	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	62.5994209238392	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGAAACCTTGAAAGACAT	95	False	NA	NA	False	NA	NA	NA	35126947	35211758	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_35127194_35178888_35178987_35179133_35179277_35206894_35207052_35211655
H1_mix_00009186	chr10	+	2079	7	NIC	ENSG00000095794.20	novel	2857	8	NA	NA	4	-56	combination_of_known_junctions	FALSE	canonical	3	38	junction_5	56.283261770757	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTAGTGTTTGGTGCTC	99	False	NA	17	True	AATAGA	-16	NA	35126951	35212379	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_35127194_35148367_35148492_35178888_35178987_35179133_35179277_35188199_35188389_35206894_35207052_35211253
H1_mix_00009187	chr10	+	1854	5	NIC	ENSG00000095794.20	novel	2857	8	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_3	53.6720364808342	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTAGTGTTGGTTTAAT	97	False	NA	13	True	TATAAA	-14	NA	35126949	35212465	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_35127194_35178888_35178987_35179133_35179277_35206894_35207052_35211253
H1_mix_00009188	chr10	+	1821	5	FSM	ENSG00000095794.20	ENST00000348787.6	1821	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	61.5223536610881	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGCTGTGTCCCCTCATT	NA	False	NA	25	True	AATAAA	-36	NA	35148371	35212958	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_35148492_35178888_35178987_35179133_35179277_35206894_35207052_35211655
H1_mix_00009190	chr10	+	2100	4	ISM	ENSG00000095794.20	ENST00000374734.7	711	6	41053	-1557	0	0	3prime_fragment	FALSE	canonical	3	79	junction_2	58.1262992686328	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGATGCTGTGTCCCCTC	3286	False	NA	22	True	AATAAA	-33	NA	35178888	35212955	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_+_35178987_35179133_35179277_35206894_35207052_35211253
H1_mix_00009194	chr10	+	6121	5	FSM	ENSG00000189180.16	ENST00000432900.7	6116	5	-5	0	0	0	multi-exon	FALSE	canonical	3	119	junction_4	48.0338422364899	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTTGTTAGTTGTATG	-19	True	NA	47	True	NA	NA	NA	38010669	38060087	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_38010784_38012297_38012351_38016870_38017016_38017290_38017387_38054374
H1_mix_00009197	chr10	+	6134	5	FSM	ENSG00000189180.16	ENST00000374618.7	6122	5	-12	0	-12	0	multi-exon	FALSE	canonical	3	33	junction_3	71.8974964793629	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATCTTGTTTCTGTACTA	-51	True	NA	23	True	AATAAA	-24	NA	38010637	38060063	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_38010784_38012297_38012351_38016870_38017021_38017290_38017387_38054374
H1_mix_00009201	chr10	+	8044	7	FSM	ENSG00000075407.19	ENST00000361085.9	8738	7	-22	716	-9	203	multi-exon	FALSE	canonical	3	12	junction_2	19.6871362400257	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTGACAAGTGGATTATA	NA	False	NA	NA	False	ATTAAA	-16	NA	38094324	38124828	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_38094491_38095537_38095634_38095743_38095805_38096573_38096633_38114754_38114882_38115194_38115291_38117389
H1_mix_00009216	chr10	+	3615	11	FSM	ENSG00000107551.21	ENST00000340258.10	3631	11	0	16	0	-16	multi-exon	FALSE	canonical	3	70	junction_4	14.5082735016955	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCGAAGATAAAGCAAAGATT	14	True	NA	NA	False	AATAAA	-6	NA	44959801	44995875	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_44959867_44970164_44970265_44971772_44971849_44982520_44982664_44984021_44984114_44984812_44984971_44989273_44989376_44989669_44989722_44990947_44991070_44991904_44992003_44993268
H1_mix_00009222	chr10	+	4601	30	NIC	ENSG00000172661.20	novel	4642	31	NA	NA	-4	-2	combination_of_known_splicesites	FALSE	canonical	3	83	junction_16	63.4973386018067	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACATTCATTTGTTTACTT	NA	False	NA	-1	True	AATAAA	-18	NA	45727214	45792959	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_45727321_45727416_45727540_45728861_45729027_45737982_45738046_45740072_45740247_45743389_45743484_45744820_45744883_45746599_45746648_45750095_45750207_45750750_45750839_45751481_45751554_45752587_45752707_45753179_45753238_45754485_45754546_45754935_45755116_45757011_45757140_45763387_45763490_45765678_45765811_45769448_45769619_45773255_45773359_45777272_45777426_45778952_45779136_45784564_45784694_45784820_45784902_45785508_45785632_45786611_45786675_45787034_45787248_45788870_45789492_45790355_45790534_45792260
H1_mix_00009223	chr10	+	4639	31	FSM	ENSG00000172661.20	ENST00000623400.4	4642	31	0	3	0	0	multi-exon	FALSE	canonical	3	133	junction_17	59.8607272480603	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCATTTGTTTACTTAC	4	True	NA	1	True	AATAAA	-20	NA	45727265	45792961	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_45727321_45727416_45727540_45728861_45729027_45737982_45738046_45740072_45740247_45743389_45743484_45744820_45744883_45746599_45746648_45750095_45750207_45750750_45750839_45751481_45751554_45752587_45752707_45753179_45753238_45754485_45754546_45754935_45755116_45757011_45757140_45759314_45759402_45763387_45763490_45765678_45765811_45769448_45769619_45773255_45773359_45777272_45777426_45778952_45779136_45784564_45784694_45784820_45784902_45785508_45785632_45786611_45786675_45787034_45787248_45788870_45789492_45790355_45790534_45792260
H1_mix_00009224	chr10	+	2379	4	FSM	ENSG00000172661.20	ENST00000471102.1	2018	4	-1	-360	-1	0	multi-exon	FALSE	canonical	3	179	junction_3	73.1862160671135	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCATTTGTTTACTTAC	NA	False	NA	1	True	AATAAA	-20	NA	45786368	45792961	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_45787248_45788870_45789492_45790355_45790534_45792260
H1_mix_00009235	chr10	+	2510	13	NIC	ENSG00000107643.17	novel	6046	15	NA	NA	10	-2	combination_of_known_junctions	FALSE	canonical	2	15	junction_12	27.4331257586315	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTAGCTATGAGCCTGTT	13	True	NA	18	True	AATAAA	-15	NA	48306689	48435875	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_48306822_48308094_48308289_48401611_48401783_48404851_48404982_48409878_48409938_48410029_48410169_48420154_48420321_48424513_48424586_48425887_48426071_48426379_48426505_48427079_48427144_48431192_48431271_48434878
H1_mix_00009236	chr10	+	5793	12	NIC	ENSG00000107643.17	novel	6046	15	NA	NA	10	-5	combination_of_known_junctions	FALSE	canonical	2	15	junction_11	27.2105351498366	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGAAATTAAGAGTTTTT	13	True	NA	14	True	AATAAA	-23	NA	48306689	48439352	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_48306822_48401611_48401783_48404851_48404982_48409878_48409938_48410029_48410169_48420154_48420321_48424513_48424586_48425887_48426071_48426379_48426505_48427079_48427144_48431192_48431271_48434878
H1_mix_00009237	chr10	+	5796	12	FSM	ENSG00000107643.17	ENST00000374189.6	5809	12	13	0	10	0	multi-exon	FALSE	canonical	3	8	junction_7	32.4516168783087	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGAGTTTTTTCATTGAA	13	True	NA	22	True	AATAAA	-31	NA	48306689	48439360	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_48306822_48401611_48401783_48404851_48404982_48409878_48409938_48410029_48410169_48420154_48420321_48424087_48424160_48425887_48426071_48426379_48426505_48427079_48427144_48431192_48431271_48434883
H1_mix_00009238	chr10	+	6061	14	NIC	ENSG00000107643.17	novel	6046	15	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	2	15	junction_13	28.9148924590281	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAAGAGTTTTTTCATT	13	True	NA	19	True	AATAAA	-28	NA	48306689	48439357	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_48306822_48308094_48308289_48325896_48325966_48401611_48401783_48404851_48404982_48409878_48409938_48410029_48410169_48420154_48420321_48424513_48424586_48425887_48426071_48426379_48426505_48427079_48427144_48431192_48431271_48434878
H1_mix_00009239	chr10	+	6816	6	FSM	ENSG00000107643.17	ENST00000469879.6	537	6	-1820	-4459	-1820	0	multi-exon	FALSE	canonical	2	15	junction_5	29.8087235553621	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAAGAGTTTTTTCATT	8103	False	NA	19	True	AATAAA	-28	NA	48422698	48439357	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_48424586_48425887_48426071_48426379_48426505_48427079_48427144_48431192_48431271_48434878
H1_mix_00009242	chr10	+	2633	8	FSM	ENSG00000204152.14	ENST00000478381.5	2623	8	-10	0	-10	0	multi-exon	FALSE	canonical	3	21	junction_1	45.6928521181801	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTCTATGTTGGTTAAT	NA	False	NA	NA	False	ATTAAA	-19	NA	49942038	49974850	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_49942301_49943234_49943359_49945031_49945091_49952125_49952220_49952448_49952534_49955001_49955061_49958369_49958481_49973011
H1_mix_00009246	chr10	+	2763	7	FSM	ENSG00000204149.15	ENST00000618171.5	2763	7	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	8.70663859107265	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATTGCCCAAGTCACACA	327	False	NA	-84	True	NA	NA	NA	49988603	50010407	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_49989377_49991675_49991745_49994394_49994430_50001995_50002097_50004684_50004721_50008024_50008077_50008710
H1_mix_00009250	chr10	+	4749	30	NIC	ENSG00000099290.17	novel	4642	31	NA	NA	0	194	combination_of_known_splicesites	FALSE	canonical	3	53	junction_16	66.4379767621093	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGTAATAGCCAGGGGAAG	1	True	NA	NA	False	AATGAA	-3	NA	50067953	50133703	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_50068009_50068104_50068228_50069546_50069712_50078674_50078738_50080757_50080932_50084071_50084166_50085496_50085559_50087274_50087323_50090775_50090887_50091430_50091519_50092161_50092234_50093267_50093387_50093859_50093918_50095147_50095208_50095598_50095779_50097674_50097803_50104041_50104144_50106333_50106466_50110100_50110271_50113894_50113998_50117905_50118059_50119586_50119770_50125112_50125242_50125368_50125450_50126056_50126180_50127159_50127223_50127582_50127796_50129418_50130040_50130900_50131079_50132805
H1_mix_00009251	chr10	+	4642	31	FSM	ENSG00000099290.17	ENST00000282633.10	4642	31	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_16	70.6695282439484	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGTTTACTTACTGT	1	True	NA	8	True	AATAAA	-23	NA	50067953	50133509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_50068009_50068104_50068228_50069546_50069712_50078674_50078738_50080757_50080932_50084071_50084166_50085496_50085559_50087274_50087323_50090775_50090887_50091430_50091519_50092161_50092234_50093267_50093387_50093859_50093918_50095147_50095208_50095598_50095779_50097674_50097803_50099977_50100065_50104041_50104144_50106333_50106466_50110100_50110271_50113894_50113998_50117905_50118059_50119586_50119770_50125112_50125242_50125368_50125450_50126056_50126180_50127159_50127223_50127582_50127796_50129418_50130040_50130900_50131079_50132805
H1_mix_00009256	chr10	+	5612	6	FSM	ENSG00000204147.11	ENST00000374006.1	632	6	-600	-4380	30	0	multi-exon	FALSE	canonical	3	30	junction_2	54.488163852345	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAATGTCCTTGAATGTA	NA	False	NA	NA	False	CATAAA	-45	NA	50739347	50759189	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_50740003_50742914_50743011_50745201_50745275_50749342_50749403_50752467_50752557_50754550
H1_mix_00009258	chr10	+	4998	6	FSM	ENSG00000204147.11	ENST00000643851.1	5005	6	0	7	0	-7	multi-exon	FALSE	canonical	3	30	junction_2	49.6934603343337	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGACATCAATGTCCTT	-9	True	NA	NA	False	CATAAA	-38	NA	50739935	50759182	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_50739984_50742914_50743011_50745201_50745275_50749342_50749403_50752467_50752557_50754550
H1_mix_00009270	chr10	+	7497	6	FSM	ENSG00000108064.11	ENST00000373895.7	973	6	-108	-6416	-19	2484	multi-exon	FALSE	canonical	3	31	junction_4	166.959396261486	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTTCTAGTATTCTGTG	160	False	NA	6	True	ATTAAA	-18	NA	58385325	58401704	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_58385649_58386219_58386339_58388189_58388261_58388669_58388820_58394357_58394415_58394927
H1_mix_00009275	chr10	+	1884	8	NIC	ENSG00000170312.17	novel	1889	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	483.17778871778	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATAATGCTGCTCATT	-1	True	NA	0	True	ATTAAA	-7	NA	60778477	60794843	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_60778571_60780140_60780203_60784704_60784862_60785663_60785788_60788059_60788235_60791889_60792054_60792147_60792290_60793876
H1_mix_00009276	chr10	+	3272	8	FSM	ENSG00000170312.17	ENST00000395284.8	1889	8	0	-1383	0	1383	multi-exon	FALSE	canonical	0	0	junction_5	483.17778871778	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGTATTTGAGAATTTAAT	-1	True	NA	NA	False	ATTAAA	-14	NA	60778477	60796235	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_60778571_60780140_60780203_60784704_60784862_60785663_60785788_60788059_60788231_60791889_60792054_60792147_60792290_60793876
H1_mix_00009277	chr10	+	1979	8	NIC	ENSG00000170312.17	novel	1948	8	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	596.153007342297	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCTCATTGTGATTCTT	11	False	NA	9	True	ATTAAA	-16	NA	60778489	60794852	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_60778669_60780140_60780203_60784704_60784862_60785663_60785788_60788059_60788235_60791889_60792054_60792147_60792290_60793876
H1_mix_00009282	chr10	+	1813	4	FSM	ENSG00000148572.16	ENST00000277746.11	1813	4	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_1	18.9267594221045	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTTGTTGAACGTGGTT	4	True	NA	27	True	AATAAA	-15	NA	63133327	63155024	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_63133501_63146208_63146294_63152149_63152191_63153510
H1_mix_00009289	chr10	+	1453	10	NIC	ENSG00000096746.18	novel	2356	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	639	junction_1	405.801264988993	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGATGTTGATACTTTT	-1	True	NA	19	True	AATAAA	-15	NA	68332063	68342271	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_68332236_68337198_68337334_68337857_68337997_68338502_68338688_68339139_68339227_68339439_68339556_68341173_68341310_68341584_68341681_68341758_68341852_68341977
H1_mix_00009291	chr10	+	1351	10	FSM	ENSG00000096746.18	ENST00000354695.5	1332	10	-19	0	0	0	multi-exon	FALSE	canonical	3	799	junction_4	343.12305678687	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGATGTTGATACTTTTT	7	False	NA	20	True	AATAAA	-16	NA	68332102	68342272	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_68332217_68337198_68337334_68337857_68337997_68338502_68338643_68339139_68339227_68339439_68339556_68341173_68341310_68341584_68341681_68341758_68341852_68341977
H1_mix_00009292	chr10	+	2704	7	FSM	ENSG00000096746.18	ENST00000481819.5	2704	7	0	0	0	0	multi-exon	FALSE	canonical	3	735	junction_1	356.098496049743	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGATGTTGATACTTTT	1554	False	NA	19	True	AATAAA	-15	NA	68336805	68342271	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_68338688_68339139_68339227_68339439_68339556_68341173_68341310_68341584_68341681_68341758_68341852_68341977
H1_mix_00009293	chr10	+	2308	8	FSM	ENSG00000096746.18	ENST00000491200.5	2308	8	0	0	0	0	multi-exon	FALSE	canonical	3	735	junction_2	337.837118101826	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGGCGTCTGTCCTAG	281	False	NA	19	True	AATAAA	-19	NA	68337615	68343191	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_68337997_68338502_68338688_68339139_68339227_68339439_68339556_68341173_68341310_68341584_68341681_68341758_68341852_68341977
H1_mix_00009294	chr10	+	1507	4	FSM	ENSG00000096746.18	ENST00000478698.1	1507	4	0	0	0	0	multi-exon	FALSE	canonical	3	1483	junction_2	140.952316602302	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCACTGATGTTGATACTT	176	False	NA	17	True	AATAAA	-13	NA	68338805	68342269	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_68339227_68339439_68339556_68341173_68341852_68341977
H1_mix_00009299	chr10	+	4540	24	FSM	ENSG00000060339.14	ENST00000630771.2	4540	24	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_13	121.755946043614	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGTGTACTTCCTTCAG	60	False	NA	7	True	ATTAAA	-17	NA	68721143	68792375	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_68721283_68722454_68722578_68736875_68737049_68737844_68737890_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68757293_68757378_68761006_68761193_68765887_68766080_68771205_68771446_68772987_68773100_68786135_68786219_68786545_68786693_68787926_68788048_68788142_68788329_68789709_68789916_68791206
H1_mix_00009302	chr10	+	4681	25	FSM	ENSG00000060339.14	ENST00000265872.11	4658	25	-23	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	129.516347906355	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGTACTTCCTTCAGAA	-14	True	NA	9	True	ATTAAA	-19	NA	68721215	68792377	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_68721283_68722454_68722578_68736875_68737049_68737844_68737890_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68756272_68756484_68757293_68757378_68761006_68761193_68765887_68766080_68771205_68771446_68772987_68773100_68786135_68786219_68786545_68786693_68787926_68788048_68788142_68788329_68789709_68789916_68791206
H1_mix_00009303	chr10	+	4917	25	NIC	ENSG00000060339.14	novel	4658	25	NA	NA	0	112	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	148.67019334382	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTTGGCAGTGTCTAAT	-14	True	NA	NA	False	AGTAAA	-42	NA	68721215	68792489	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_68721407_68722454_68722578_68736875_68737049_68737844_68737890_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68756272_68756484_68757293_68757378_68761006_68761193_68765887_68766080_68771205_68771446_68772987_68773100_68786135_68786219_68786545_68786693_68787926_68788048_68788142_68788329_68789709_68789916_68791206
H1_mix_00009304	chr10	+	4661	25	NIC	ENSG00000060339.14	novel	4658	25	NA	NA	-2	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	148.558063611131	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAACCTGTGTACTTCCTT	7	True	NA	4	True	ATTAAA	-14	NA	68721236	68792372	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_68721289_68722454_68722578_68736875_68737049_68737844_68737890_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68756272_68756484_68757293_68757378_68761006_68761193_68765887_68766080_68771205_68771446_68772987_68773100_68786135_68786219_68786545_68786693_68787926_68788048_68788142_68788329_68789709_68789916_68791206
H1_mix_00009307	chr10	+	4774	25	NNC	ENSG00000060339.14	novel	869	7	NA	NA	241	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	149.007684132583	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTTTAAATTAACCTGT	266	False	NA	-6	True	ATTAAA	-4	NA	68721495	68792362	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_68721671_68722454_68722578_68736875_68737049_68737844_68737890_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68756272_68756484_68757293_68757378_68761006_68761193_68765887_68766080_68771205_68771446_68772987_68773100_68786135_68786219_68786545_68786693_68787926_68788048_68788142_68788329_68789709_68789916_68791206
H1_mix_00009308	chr10	+	4738	25	NIC	ENSG00000060339.14	novel	869	7	NA	NA	280	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	153.660288868009	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAACCTGTGTACTTCCTT	16	True	NA	4	True	ATTAAA	-14	NA	68721534	68792372	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_68721664_68722454_68722578_68736875_68737049_68737844_68737890_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68756272_68756484_68757293_68757378_68761006_68761193_68765887_68766080_68771205_68771446_68772987_68773100_68786135_68786219_68786545_68786693_68787926_68788048_68788142_68788329_68789709_68789916_68791206
H1_mix_00009313	chr10	+	3280	4	FSM	ENSG00000165730.16	ENST00000642869.1	3630	4	350	0	350	0	multi-exon	FALSE	canonical	3	18	junction_2	2.94392028877595	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTAGTGAATTTTTT	439	False	NA	14	True	AATATA	-16	NA	68827973	68893060	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_68828270_68881957_68882111_68884259_68886619_68892588
H1_mix_00009321	chr10	+	2554	8	FSM	ENSG00000122958.15	ENST00000395098.5	2554	8	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_7	261.742746425039	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACTGAGCTTGCTGTTT	84	False	NA	16	True	AATAAA	-12	NA	69124151	69172856	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_69124281_69132897_69133048_69155811_69155888_69157006_69157164_69158046_69158212_69162405_69162513_69166041_69166111_69171155
H1_mix_00009322	chr10	+	4227	9	FSM	ENSG00000122958.15	ENST00000263559.11	4227	9	0	0	0	0	multi-exon	FALSE	canonical	3	658	junction_8	70.4765031765907	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAATTTTCTCATTGTT	-27	True	NA	NA	False	ATTAAA	-21	NA	69124177	69174412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_69124281_69132897_69133048_69155811_69155888_69157006_69157164_69158046_69158212_69162405_69162513_69166041_69166111_69168488_69168632_69171155
H1_mix_00009324	chr10	+	666	2	FSM	ENSG00000156502.14	ENST00000497254.1	666	2	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTCATATGCATTTACTC	5077	False	NA	70	True	AATAAA	-20	NA	69207775	69209099	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_69207942_69208599
H1_mix_00009326	chr10	+	3751	18	FSM	ENSG00000156515.24	ENST00000493591.6	3745	18	-6	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	342.597820244067	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTGTACCAATTCAAAGA	-34	True	NA	11	True	NA	NA	NA	69318846	69401864	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_69319178_69343826_69343990_69359896_69360046_69364782_69364903_69368535_69368632_69369236_69369337_69369440_69369625_69376933_69377090_69379861_69380096_69382486_69382792_69384332_69384482_69384795_69384916_69386322_69386419_69389196_69389297_69392124_69392309_69394949_69395106_69398594_69398829_69400990
H1_mix_00009338	chr10	+	1677	23	FSM	ENSG00000197467.17	ENST00000682048.1	1677	23	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_15	12.7314928068514	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGAAACATGGCAATTC	6572	False	NA	-3	True	ATTAAA	-2	NA	69902747	69959127	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_69902856_69904932_69904960_69905786_69905823_69917288_69917334_69918284_69918318_69919061_69919089_69921881_69921936_69922707_69922795_69923801_69923856_69924962_69925008_69925803_69925873_69927086_69927111_69928936_69929000_69930042_69930088_69930399_69930553_69936755_69936783_69937634_69937716_69944124_69944179_69945670_69945725_69947306_69947343_69952881_69952969_69957003_69957043_69958698
H1_mix_00009364	chr10	+	734	3	FSM	ENSG00000166295.9	ENST00000478193.5	734	3	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	460.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATTTTTAGACATCAATT	0	True	NA	NA	False	TTTAAA	-16	NA	72216028	72233615	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_72216073_72230365_72230441_72233000
H1_mix_00009365	chr10	+	1117	4	NIC	ENSG00000166295.9	novel	3231	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	149	junction_1	361.414197593595	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGCATTATCCTTTCA	0	True	NA	21	True	AATAAA	-21	NA	72216028	72233829	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_72216073_72223887_72224057_72230365_72230441_72233000
H1_mix_00009366	chr10	+	1009	3	NIC	ENSG00000166295.9	novel	3231	4	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	3	191	junction_1	406	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGCATTATCCTTTCA	5	True	NA	21	True	AATAAA	-21	NA	72216033	72233829	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_72216139_72230365_72230441_72233000
H1_mix_00009368	chr10	+	2095	2	FSM	ENSG00000168209.6	ENST00000473155.2	1830	2	-232	-33	-227	23	multi-exon	FALSE	canonical	3	866	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATGAAGTGAAAAGGAGGG	691	False	NA	39	True	AATAAA	-40	NA	72273691	72276059	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_72274422_72274694
H1_mix_00009369	chr10	+	1749	3	FSM	ENSG00000168209.6	ENST00000307365.4	1744	3	-5	0	0	0	multi-exon	FALSE	canonical	3	866	junction_2	4.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTTGAGTCTCTCATCA	-4	True	NA	16	True	AATAAA	-17	NA	72273918	72276036	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_72274061_72274156_72274422_72274694
H1_mix_00009376	chr10	+	1941	12	NNC	ENSG00000138286.15	novel	5455	14	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	16.5004382611468	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTATAAATACATTTTGT	12	False	NA	-8	True	AATAAA	-24	NA	73168132	73235452	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_73168387_73174686_73174792_73177845_73177974_73192555_73192699_73193476_73193594_73208618_73208787_73210250_73210439_73228059_73228185_73230421_73230526_73232938_73233164_73234816_73234941_73235192
H1_mix_00009377	chr10	+	2022	9	NIC	ENSG00000138286.15	novel	5455	14	NA	NA	73	-10	combination_of_known_junctions	FALSE	canonical	3	31	junction_8	14.2384821873681	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATAGGTCTTTTTTGTGG	71	False	NA	12	True	AATAAA	-18	NA	73168191	73231296	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_73168387_73174686_73174792_73177845_73177976_73192555_73192699_73193476_73193594_73208618_73208787_73210250_73210439_73228059_73228161_73230421
H1_mix_00009378	chr10	+	1534	10	FSM	ENSG00000138286.15	ENST00000372955.7	1534	10	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	14.7120509938093	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTATAAATACATTTTGT	9751	False	NA	-8	True	AATAAA	-24	NA	73177871	73235452	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_73177976_73192555_73192699_73193476_73193594_73208618_73208787_73210250_73210439_73228059_73228161_73230421_73230526_73232938_73233164_73234816_73234941_73235192
H1_mix_00009384	chr10	+	608	3	NNC	ENSG00000250959.3	novel	833	2	NA	NA	2530	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGGGTCCGCACTGCC	2959	False	NA	16	True	AATAAA	-16	NA	73733705	73737787	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_73733718_73735562_73735619_73737247
H1_mix_00009385	chr10	+	4445	23	FSM	ENSG00000176986.16	ENST00000345254.9	4445	23	0	0	0	0	multi-exon	FALSE	canonical	3	446	junction_12	47.1211073758945	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTAGCCTCATCTTTACT	-18	True	NA	16	True	AATAAA	-17	NA	73744371	73772161	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_73744438_73746804_73747005_73751107_73751244_73759621_73759795_73760017_73760387_73760712_73760850_73763489_73763602_73763855_73763984_73765450_73765590_73765799_73765916_73766085_73766211_73766349_73766542_73766759_73766854_73767053_73767171_73767836_73768008_73768809_73768907_73769006_73769153_73769346_73769486_73769614_73769734_73769835_73770016_73770279_73770472_73770708_73770799_73770954
H1_mix_00009386	chr10	+	4532	24	FSM	ENSG00000176986.16	ENST00000339365.2	4513	24	-19	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	130.620881733364	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTAGCCTCATCTTTACT	-18	True	NA	16	True	AATAAA	-17	NA	73744371	73772161	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_73744438_73746629_73746717_73746804_73747005_73751107_73751244_73759621_73759795_73760017_73760387_73760712_73760850_73763489_73763602_73763855_73763984_73765450_73765590_73765799_73765916_73766085_73766211_73766349_73766542_73766759_73766854_73767053_73767171_73767836_73768008_73768809_73768907_73769006_73769153_73769346_73769486_73769614_73769734_73769835_73770016_73770279_73770472_73770708_73770799_73770954
H1_mix_00009388	chr10	+	2071	3	FSM	ENSG00000196968.11	ENST00000372841.8	2071	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	1	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTATTTTACTTATTTAT	-25	True	NA	35	True	NA	NA	NA	73772275	73776219	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_73773042_73773189_73773816_73775540
H1_mix_00009394	chr10	+	6062	26	FSM	ENSG00000214655.11	ENST00000398706.6	6062	26	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_13	15.3979738926912	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGGCCTTTCCCTTCTT	25	True	NA	21	True	TATAAA	-29	NA	73785623	73801797	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_73786087_73788669_73788824_73789095_73789191_73789366_73789540_73789716_73789825_73789955_73790038_73790171_73790293_73790974_73791177_73791323_73791500_73791858_73792853_73793587_73793720_73793864_73794045_73794146_73794331_73794540_73794640_73795538_73795664_73796773_73797015_73797112_73797272_73797376_73797606_73797780_73798071_73798229_73798454_73799001_73799491_73800010_73800195_73800295_73800473_73800639_73800760_73801016_73801196_73801315
H1_mix_00009395	chr10	+	6010	26	FSM	ENSG00000214655.11	ENST00000605216.5	6004	26	-6	0	0	0	multi-exon	FALSE	canonical	3	30	junction_13	15.5442079244972	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGACCTGGGCCTTTCCC	11	True	NA	16	True	TATAAA	-24	NA	73785655	73801792	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_73786087_73788669_73788824_73789095_73789191_73789366_73789540_73789716_73789825_73789955_73790038_73790171_73790293_73790974_73791177_73791323_73791500_73791858_73792853_73793587_73793720_73793864_73794045_73794146_73794331_73794555_73794640_73795538_73795664_73796773_73797015_73797112_73797272_73797376_73797606_73797780_73798071_73798229_73798454_73799001_73799491_73800010_73800195_73800295_73800473_73800639_73800760_73801016_73801196_73801315
H1_mix_00009398	chr10	+	2372	11	FSM	ENSG00000122861.16	ENST00000372764.4	2343	11	-22	-7	6	5	multi-exon	FALSE	canonical	3	74	junction_1	12.0203993278094	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCTGGTGCTTGTATGG	317	False	NA	29	True	AATAAA	-36	NA	73911109	73917501	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_73911219_73911524_73911613_73912040_73912069_73912214_73912323_73912923_73913099_73913289_73913382_73913538_73913759_73913979_73914129_73914775_73914917_73915250_73915400_73916388
H1_mix_00009400	chr10	+	1255	10	FSM	ENSG00000156110.15	ENST00000672429.1	1249	10	-6	0	-6	0	multi-exon	FALSE	canonical	3	45	junction_6	157.143953820127	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAAATTTTTATTTCAT	NA	False	NA	7	True	ATTAAA	-18	NA	74151195	74708699	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_74151344_74200763_74200839_74224537_74224592_74314666_74314746_74394140_74394314_74398470_74398580_74589281_74589318_74600378_74600494_74670182_74670270_74708320
H1_mix_00009403	chr10	+	1993	11	FSM	ENSG00000156110.15	ENST00000372734.5	1993	11	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_1	58.5050425177181	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATGGTATAATTGGACT	2	True	NA	10	True	AATAAA	-19	NA	74176762	74709290	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_74176887_74200763_74200839_74224537_74224592_74314666_74314746_74394140_74394314_74398470_74398580_74525255_74525427_74589281_74589318_74600378_74600494_74670182_74670270_74708320
H1_mix_00009410	chr10	+	8317	18	FSM	ENSG00000156650.14	ENST00000287239.10	8314	18	-4	1	0	-1	multi-exon	FALSE	canonical	3	22	junction_1	14.0214862309445	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGGACTTTGATCTTCA	-4	True	NA	11	True	AATAAA	-17	NA	74826595	75032623	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_74826786_74838682_74838753_74842599_74843479_74959969_74960079_74969659_74969776_74970019_74970102_74972506_74972640_74975398_74976331_74977315_74977438_74979223_74979340_74981786_74981929_74985079_74985242_74989018_74989113_75020581_75020814_75021125_75021286_75021880_75022232_75024957_75025250_75028488
H1_mix_00009412	chr10	+	7118	6	NIC	ENSG00000156671.15	novel	6906	6	NA	NA	-158	-2	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	26.1120661763867	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTACAGTTTCTTATTGAA	2016	False	NA	NA	False	AATAAA	-15	NA	75111352	75182121	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_75111779_75150513_75151107_75164644_75164741_75168540_75168659_75176065_75176217_75176387
H1_mix_00009414	chr10	+	3193	10	FSM	ENSG00000165637.14	ENST00000332211.11	1512	10	-1111	-570	-469	570	multi-exon	FALSE	canonical	3	2595	junction_4	163.671079370249	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATAATTGGATATGATTAA	NA	False	NA	NA	False	NA	NA	NA	75209684	75232018	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_75210939_75211133_75211190_75212229_75212299_75214020_75214071_75219062_75219216_75219303_75219357_75220742_75220971_75222251_75222403_75229643_75229702_75230897
H1_mix_00009418	chr10	+	4065	2	FSM	ENSG00000165637.14	ENST00000460044.1	770	2	-2858	-437	-2858	264	multi-exon	FALSE	canonical	3	3037	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTTACACAAACACACCATA	NA	False	NA	NA	False	AAAAAG	-15	NA	75226451	75231712	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_75229702_75230897
H1_mix_00009423	chr10	+	656	6	FSM	ENSG00000138326.21	ENST00000435275.5	656	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	4766.10866011257	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTATTTGCAGTTTCCT	NA	False	NA	30	True	AATAAA	-29	NA	78033759	78040713	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_78033905_78035351_78035418_78035510_78035721_78037193_78037305_78040200_78040226_78040614
H1_mix_00009425	chr10	+	1008	4	FSM	ENSG00000138326.21	ENST00000478655.6	1008	4	0	0	0	0	multi-exon	FALSE	canonical	3	9029	junction_1	1430.73159218943	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAAGTGTTCTGTGAACT	-1	True	NA	NA	False	AATAGA	-32	NA	78033862	78037883	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_78033905_78035351_78035418_78035510_78035721_78037193
H1_mix_00009427	chr10	+	538	6	FSM	ENSG00000138326.21	ENST00000372360.9	534	6	0	-4	0	0	multi-exon	FALSE	canonical	3	3781	junction_4	3716.40794316232	997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTTGTTTGAAATGTAT	-1	True	NA	18	True	AATAAA	-17	NA	78033862	78040701	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_78033905_78035351_78035418_78035510_78035721_78037193_78037305_78040203_78040226_78040614
H1_mix_00009428	chr10	+	539	5	FSM	ENSG00000138326.21	ENST00000482069.5	539	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5095.61463417319	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTCTGGTTGTTTGAAA	28	False	NA	13	True	AATAAA	-12	NA	78033916	78040696	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_78033987_78035351_78035418_78035510_78035721_78037193_78037305_78040614
H1_mix_00009430	chr10	+	2146	1	FSM	ENSG00000138326.21	ENST00000480662.2	2146	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTTGTTTGAAATGTAT	629	False	NA	18	True	AATAAA	-17	NA	78038555	78040701	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_78038600_78040700
H1_mix_00009431	chr10	+	7615	25	FSM	ENSG00000108175.19	ENST00000334512.10	7615	25	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	17.2312196479401	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTGGCGAATTAGCTATT	-19	True	NA	15	True	AATAAA	-15	NA	79068965	79316519	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_79069271_79118914_79119025_79139681_79139778_79162052_79162134_79201583_79201693_79208335_79208450_79216168_79216275_79277180_79277326_79289774_79289890_79290958_79291177_79292157_79292357_79293380_79293654_79296470_79296654_79297612_79297691_79298405_79298581_79299049_79299192_79300731_79300943_79302106_79302213_79304014_79304176_79305163_79305232_79305532_79305602_79306099_79306345_79307404_79307572_79310923_79311185_79312641
H1_mix_00009432	chr10	+	457	4	FSM	ENSG00000108175.19	ENST00000472035.5	457	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	46.1615520632581	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGCCAAGGCTGGCCCC	12	False	NA	NA	False	NA	NA	NA	79243668	79291085	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_79243739_79277180_79277326_79289774_79289890_79290958
H1_mix_00009435	chr10	+	821	6	FSM	ENSG00000108179.14	ENST00000448165.1	821	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	118.264111208769	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAAGCATTGCCTGTGAT	130	False	NA	NA	False	NA	NA	NA	79347657	79354086	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_79347744_79349075_79349107_79349664_79349754_79351486_79351584_79352316_79352393_79353644
H1_mix_00009436	chr10	+	1235	1	FSM	ENSG00000253626.4	ENST00000520547.4	3908	1	3	2670	3	-2670	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGACGTGTAAAATGCCA	-2	True	NA	NA	False	AATAAA	-37	NA	79512535	79513770	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_79512500_79513800
H1_mix_00009443	chr10	+	785	5	FSM	ENSG00000133678.14	ENST00000476173.5	785	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	191.108607864743	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGACACTTCCACTATAT	22	False	NA	NA	False	NA	NA	NA	80079294	80091352	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_80079308_80081840_80081945_80082144_80082205_80090379_80090432_80090796
H1_mix_00009444	chr10	+	407	4	FSM	ENSG00000133678.14	ENST00000463209.1	407	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	208.157525820124	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAATTTACTTTCCAAAA	2430	False	NA	NA	False	ACTAAA	-24	NA	80081702	80086441	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_80081735_80081840_80081945_80082144_80082205_80086230
H1_mix_00009446	chr10	+	867	4	FSM	ENSG00000189129.14	ENST00000372270.6	534	4	-38	-295	-38	0	multi-exon	FALSE	canonical	1	2	junction_1	95.030989097709	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCCTATGAAGTGAAAT	NA	False	NA	20	True	ATTAAA	-25	NA	80131643	80145359	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_80131832_80142081_80142180_80144222_80144344_80144899
H1_mix_00009447	chr10	+	776	4	FSM	ENSG00000189129.14	ENST00000372263.4	776	4	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	17.4419672692682	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCCTATGAAGTGAAAT	0	True	NA	20	True	ATTAAA	-25	NA	80132729	80145359	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_80132827_80142081_80142180_80144222_80144344_80144899
H1_mix_00009450	chr10	+	5801	6	FSM	ENSG00000122378.14	ENST00000606162.6	5801	6	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_1	89.1008417468657	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTCTTGTCAGTGATT	25	True	NA	11	True	AATAAA	-25	NA	80408550	80437115	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_80408644_80420465_80420646_80422416_80422509_80425865_80426007_80427331_80427497_80431985
H1_mix_00009451	chr10	+	1717	7	NNC	ENSG00000122378.14	novel	5801	6	NA	NA	0	46831	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	217.13084892653	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGTGTAAAATAGGCCA	25	True	NA	NA	False	NA	NA	NA	80408550	80483946	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_80408644_80420465_80420646_80422416_80422509_80425865_80426007_80427331_80427497_80431985_80432995_80483909
H1_mix_00009452	chr10	+	1647	6	FSM	ENSG00000122378.14	ENST00000372187.9	1647	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	231.898771018736	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGTATGTATAAGATTTT	-15	True	NA	28	True	AATAAA	-18	NA	80413818	80432996	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_80413877_80420465_80420646_80422416_80422509_80425865_80426007_80427331_80427497_80431985
H1_mix_00009457	chr10	+	2509	9	FSM	ENSG00000165678.22	ENST00000372134.6	2382	9	-14	-113	13	113	multi-exon	FALSE	canonical	3	1177	junction_1	111.354094558754	240	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTTGATTAGTCTAATT	-10	True	NA	NA	False	NA	NA	NA	84139494	84153681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_84139594_84141461_84141630_84142654_84142755_84143994_84144107_84144874_84145017_84148729_84148839_84150054_84150244_84150708_84150881_84152263
H1_mix_00009466	chr10	+	756	5	FSM	ENSG00000173267.14	ENST00000372017.4	756	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	7.79021822544144	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGCTTCCTCTGGGTGC	4	True	NA	7	True	AATAAA	-17	NA	86958598	86963258	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_86958819_86959632_86959675_86960000_86960129_86962603_86962676_86962964
H1_mix_00009469	chr10	+	3402	9	FSM	ENSG00000122376.12	ENST00000298784.5	3402	9	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_6	61.3066064955483	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGCTTCTTTTACTCTG	-3	True	NA	13	True	AATAAA	-15	NA	87095195	87191463	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_87095249_87096933_87096990_87151349_87152880_87158047_87158156_87170477_87170673_87170839_87170975_87180074_87180304_87187084_87187201_87190483
H1_mix_00009470	chr10	+	3720	10	FSM	ENSG00000122376.12	ENST00000298786.5	3601	10	-121	2	-111	0	multi-exon	FALSE	canonical	3	154	junction_6	43.3564041149376	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGCTTCTTTTACTCTG	596	False	NA	13	True	AATAAA	-15	NA	87095084	87191463	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_87095249_87096933_87096990_87151349_87152880_87158047_87158156_87170477_87170673_87170839_87170975_87175888_87176096_87180074_87180304_87187084_87187201_87190483
H1_mix_00009491	chr10	+	726	8	FSM	ENSG00000148688.14	ENST00000414836.1	726	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	222.935883525433	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTCATTTGGAGCTAG	3584	False	NA	16	True	AATAAA	-17	NA	90875557	90900766	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_90875615_90876023_90876099_90879062_90879135_90885811_90885902_90894774_90894892_90895879_90895918_90896312_90896393_90900569
H1_mix_00009493	chr10	+	527	3	FSM	ENSG00000148688.14	ENST00000479678.1	527	3	0	0	0	0	multi-exon	FALSE	canonical	3	630	junction_2	22	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTCATTTGGAGCTAG	993	False	NA	16	True	AATAAA	-17	NA	90895667	90900766	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_90895918_90896312_90896393_90900569
H1_mix_00009495	chr10	+	1075	3	FSM	ENSG00000180628.15	ENST00000490164.1	973	3	-120	18	0	-18	multi-exon	FALSE	canonical	3	42	junction_2	10.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATGGCTAATAAGTTATT	-9	True	NA	NA	False	AATAAA	-17	NA	91220662	91227942	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_91220837_91222688_91222984_91227336
H1_mix_00009500	chr10	+	7253	38	FSM	ENSG00000095564.15	ENST00000265990.12	8361	38	-4	1112	-4	-1112	multi-exon	FALSE	canonical	3	93	junction_9	28.9370743716795	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGCAACTGTGTGTTAT	-34	True	NA	119	True	AATAAA	-22	NA	91923765	92030325	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_91924091_91935656_91935781_91939951_91940067_91942421_91942569_91951402_91951567_91953736_91953874_91956527_91956658_91957224_91957294_91959064_91959155_91959784_91959881_91959977_91960155_91962537_91962679_91964076_91964202_91966636_91966758_91980453_91980559_91981642_91981793_91982082_91982226_91982586_91982762_91984200_91984405_91989153_91989581_91992118_91992310_91993693_91993848_91994534_91994645_91996368_91996571_91997602_91997752_92008122_92008276_92008828_92008951_92009040_92009209_92011072_92011151_92011285_92011416_92013666_92013809_92013898_92014030_92016339_92016466_92018782_92018936_92024755_92024968_92026591_92026752_92027129_92027301_92028789
H1_mix_00009502	chr10	+	7365	38	NNC	ENSG00000095564.15	novel	8361	38	NA	NA	12	-1112	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_25	47.9974433212456	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGCAACTGTGTGTTAT	-18	True	NA	119	True	AATAAA	-22	NA	91923781	92030325	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_91924091_91935656_91935781_91939951_91940067_91942421_91942569_91951402_91951571_91953736_91953874_91956527_91956658_91957224_91957294_91959064_91959283_91959784_91959881_91959977_91960155_91962537_91962679_91964076_91964202_91966636_91966758_91980453_91980559_91981642_91981793_91982082_91982226_91982586_91982762_91984200_91984405_91989153_91989581_91992118_91992310_91993693_91993848_91994534_91994645_91996368_91996571_91997602_91997752_92008126_92008276_92008828_92008951_92009040_92009209_92011072_92011151_92011285_92011416_92013666_92013809_92013898_92014030_92016339_92016466_92018782_92018936_92024755_92024968_92026591_92026752_92027129_92027301_92028789
H1_mix_00009503	chr10	+	462	1	FSM	ENSG00000105988.6	ENST00000335274.2	462	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCTCCGGTAGCACCTGG	17	True	NA	NA	False	NA	NA	NA	92216331	92216793	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_92216300_92216800
H1_mix_00009508	chr10	+	1605	4	FSM	ENSG00000152804.11	ENST00000472590.6	1605	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	100.270744597925	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGTTGCAAGTCTAATTCT	-4	True	NA	18	True	AATAAA	-22	NA	92691819	92695641	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_92692100_92692367_92692547_92692701_92692753_92694546
H1_mix_00009516	chr10	+	2488	9	NNC	ENSG00000138180.16	novel	2658	9	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	60.7530863413539	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTAGTGTATTCGTGT	7	True	NA	13	True	AATAAA	-18	NA	93496632	93529092	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_93496924_93500039_93500086_93503112_93503389_93506987_93507057_93515404_93515556_93516934_93517249_93518876_93518949_93519681_93519808_93527949
H1_mix_00009517	chr10	+	2507	9	NNC	ENSG00000138180.16	novel	2658	9	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_1	52.5522061858491	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTAGTGTATTCGTGT	-5	True	NA	13	True	AATAAA	-18	NA	93496620	93529092	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_93496782_93500039_93500235_93503112_93503389_93506987_93507057_93515404_93515556_93516934_93517249_93518876_93518949_93519681_93519808_93527949
H1_mix_00009521	chr10	+	3391	3	NIC	ENSG00000176273.15	novel	3488	3	NA	NA	0	-2	combination_of_known_splicesites	TRUE	canonical	3	16	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTTGGTTGTTATGAT	2	True	NA	NA	False	AATAAA	-18	NA	93894021	93903822	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_93894161_93898570_93898752_93900751
H1_mix_00009522	chr10	+	2122	3	FSM	ENSG00000176273.15	ENST00000603665.1	2122	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATAAGACTCTATGTTT	2	True	NA	NA	False	AATAAA	-15	NA	93894021	93909825	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_93894212_93906251_93906386_93908027
H1_mix_00009526	chr10	+	10921	23	NNC	ENSG00000119969.15	novel	3128	22	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_22	129.91052228997	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGACTGCTCGGTTAA	6	True	NA	25	True	AATAAA	-19	NA	94545815	94613905	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_94545908_94546376_94546499_94554125_94554249_94558138_94558196_94562690_94562728_94562811_94562877_94571387_94571430_94573959_94574188_94574553_94574737_94576661_94576806_94581325_94581523_94582962_94583060_94588228_94588391_94590412_94590553_94590637_94590777_94592228_94592313_94592394_94592515_94593498_94593616_94594694_94594855_94596859_94596957_94597034_94597112_94601527_94605319_94609258
H1_mix_00009527	chr10	+	13035	23	NIC	ENSG00000119969.15	novel	3128	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	215	junction_1	86.0669545247014	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGACTGCTCGGTTAA	6	True	NA	25	True	AATAAA	-19	NA	94545815	94613905	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_94545908_94546376_94546499_94554125_94554249_94558138_94558196_94562690_94562728_94562811_94562877_94571387_94571430_94573959_94574188_94574553_94574737_94576661_94576806_94581325_94581523_94582962_94583060_94588228_94588391_94590412_94590553_94590637_94590777_94592228_94592313_94592394_94592515_94593498_94593616_94594694_94594855_94596859_94596957_94597034_94597112_94601527_94608027_94609852
H1_mix_00009529	chr10	+	5166	10	FSM	ENSG00000119969.15	ENST00000371327.2	4987	10	0	-179	0	179	multi-exon	FALSE	canonical	3	7	junction_8	181.133331970174	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTCATGTGCAGGTGGAC	NA	False	NA	NA	False	NA	NA	NA	94590698	94614084	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_94590777_94592228_94592313_94592394_94592515_94593498_94593616_94594694_94594855_94596859_94596957_94597034_94597112_94601527_94601612_94607909_94608027_94609852
H1_mix_00009534	chr10	+	2830	6	FSM	ENSG00000107443.16	ENST00000403870.7	2830	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	77.293207981038	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGGAGAAGAAAGATTTGG	345	False	NA	NA	False	GATAAA	-24	NA	96043393	96059588	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_96043720_96044352_96044463_96050255_96050467_96056700_96057001_96057123_96057248_96057829
H1_mix_00009535	chr10	+	4007	6	FSM	ENSG00000107443.16	ENST00000265992.9	4115	6	108	0	-81	0	multi-exon	FALSE	canonical	2	5	junction_4	87.7254809049229	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTCGGTATTTTTGTTT	453	False	NA	NA	False	AATAAA	-18	NA	96043501	96060870	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_96043720_96044352_96044463_96050255_96050467_96056700_96057001_96057120_96057248_96057829
H1_mix_00009536	chr10	+	3959	6	FSM	ENSG00000107443.16	ENST00000465148.3	3959	6	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_3	24.2074368738204	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTCGGTATTTTTGTTT	25	True	NA	NA	False	AATAAA	-18	NA	96043582	96060870	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_96043720_96044352_96044463_96050255_96050467_96056700_96057001_96057087_96057248_96057829
H1_mix_00009540	chr10	+	8270	2	FSM	ENSG00000177853.15	ENST00000534948.2	8270	2	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGTGGGCTGAATTTGGC	NA	False	NA	NA	False	AATAAA	-17	NA	96155342	96163761	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_96156048_96156196
H1_mix_00009544	chr10	+	10366	8	FSM	ENSG00000196233.14	ENST00000371103.8	10342	8	-24	0	-2	0	multi-exon	FALSE	canonical	3	19	junction_7	15.0969655012833	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAGCTTGGTTTCTACT	-21	True	NA	23	True	AATAAA	-21	NA	96832257	96964441	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_96832400_96833405_96833480_96907264_96907331_96907667_96907748_96944112_96944246_96949007_96949296_96952102_96952197_96954952
H1_mix_00009545	chr10	+	15965	7	NIC	ENSG00000196233.14	novel	16001	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_6	13.9572760793629	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTCTGTGTAGTCACTG	-19	True	NA	17	True	ATTAAA	-17	NA	96832259	96995956	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_96832400_96907264_96907331_96907667_96907748_96944112_96944246_96949007_96949296_96952102_96952197_96980792
H1_mix_00009547	chr10	+	16001	8	FSM	ENSG00000196233.14	ENST00000421806.4	16001	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_7	12.4752816826405	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTCTGTGTAGTCACTG	19	True	NA	17	True	ATTAAA	-17	NA	96832297	96995956	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_96832400_96833405_96833480_96907264_96907331_96907667_96907748_96944112_96944246_96949007_96949296_96952102_96952197_96980792
H1_mix_00009552	chr10	+	735	2	NNC	ENSG00000225850.4	novel	806	2	NA	NA	259	-3896	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACACAAAGCCTGTTTGG	NA	False	NA	12	True	AATAAA	-12	NA	97334822	97339308	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_97334972_97338722
H1_mix_00009556	chr10	+	1821	8	FSM	ENSG00000171307.19	ENST00000370846.8	1280	8	-38	-503	-11	218	multi-exon	FALSE	canonical	3	103	junction_5	171.629049441652	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACGGAGTCTCGCTCTATA	-6	True	NA	NA	False	NA	NA	NA	97446158	97457588	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_97446354_97451670_97451919_97452089_97452285_97452414_97452504_97452894_97452924_97455601_97455784_97455973_97456045_97456776
H1_mix_00009557	chr10	+	1993	12	FSM	ENSG00000171307.19	ENST00000393760.6	1977	12	-16	0	-11	0	multi-exon	FALSE	canonical	3	40	junction_2	218.199582610141	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGCTTCTCACTCTCTGC	-6	True	NA	22	True	AATAAA	-22	NA	97446158	97457370	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_97446354_97450356_97450537_97451670_97451919_97452089_97452285_97452414_97452504_97452894_97452924_97453529_97453664_97453798_97453847_97454713_97454800_97455659_97455784_97455973_97456045_97456776
H1_mix_00009558	chr10	+	1725	10	FSM	ENSG00000171307.19	ENST00000352634.8	1718	10	-7	0	0	0	multi-exon	FALSE	canonical	3	233	junction_6	116.972720255411	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTAGCTTCTCACTCT	30	False	NA	18	True	AATAAA	-18	NA	97446194	97457366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_97446354_97451670_97451919_97452089_97452285_97452414_97452504_97452894_97452924_97453529_97453664_97454713_97454800_97455659_97455784_97455973_97456045_97456776
H1_mix_00009559	chr10	+	1660	10	FSM	ENSG00000171307.19	ENST00000353979.7	1647	10	-13	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	199.856059313808	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTAGCTTCTCACTCT	26	True	NA	18	True	AATAAA	-18	NA	97446190	97457366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_97446354_97451670_97451919_97452089_97452285_97452414_97452504_97453617_97453664_97453798_97453847_97454713_97454800_97455659_97455784_97455973_97456045_97456776
H1_mix_00009560	chr10	+	1527	9	FSM	ENSG00000171307.19	ENST00000345745.9	1519	9	-8	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	181.172569667707	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGCTTCTCACTCTCTGC	37	False	NA	22	True	AATAAA	-22	NA	97446201	97457370	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_97446354_97451670_97451919_97452414_97452504_97452894_97452924_97453529_97453664_97454713_97454800_97455659_97455784_97455973_97456045_97456776
H1_mix_00009562	chr10	+	1375	9	FSM	ENSG00000171307.19	ENST00000420089.5	1362	9	-13	0	0	0	multi-exon	FALSE	canonical	3	71	junction_6	188.586850018765	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGCTGAGGTCACTGCC	5522	False	NA	-54	True	NA	NA	NA	97451735	97457294	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_97451919_97452089_97452285_97452414_97452504_97452894_97452924_97453529_97453664_97454713_97454800_97455713_97455784_97455973_97456045_97456776
H1_mix_00009563	chr10	+	1325	10	FSM	ENSG00000171307.19	ENST00000417044.1	1325	10	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_7	200.933991986927	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTTCTCACATGCTGCT	5637	False	NA	-37	True	NA	NA	NA	97451850	97457311	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_97451919_97452089_97452285_97452414_97452504_97452894_97452924_97453529_97453664_97453798_97453847_97454713_97454800_97455713_97455784_97455973_97456045_97456776
H1_mix_00009569	chr10	+	3014	12	NIC	ENSG00000155256.18	novel	3026	13	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	92	junction_7	21.8726592608328	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTTGTCATGTCTTTG	-38	True	NA	14	True	AATAAA	-16	NA	97737118	97760895	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_97737322_97738476_97738675_97743093_97743165_97744728_97744916_97748268_97748365_97749473_97749587_97750330_97750471_97751390_97751463_97753037_97753183_97757264_97757312_97757641_97757724_97759235
H1_mix_00009570	chr10	+	2943	11	NIC	ENSG00000155256.18	novel	3026	13	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_2	36.9020324643508	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTTGTCATGTCTTTG	-38	True	NA	14	True	AATAAA	-16	NA	97737118	97760895	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_97737322_97738476_97738675_97744728_97744916_97748268_97748365_97749473_97749587_97750330_97750471_97751390_97751463_97753037_97753183_97757264_97757312_97757641_97757724_97759235
H1_mix_00009573	chr10	+	3365	9	FSM	ENSG00000166024.14	ENST00000370584.7	3372	9	7	0	7	0	multi-exon	FALSE	canonical	3	22	junction_3	45.3277991413658	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCACTGTGGTGTTTGTT	2	True	NA	17	True	ATTAAA	-17	NA	98134630	98244894	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_98134707_98163292_98163398_98186466_98186564_98208100_98209900_98231511_98231688_98234445_98234517_98235424_98235521_98236023_98236165_98244090
H1_mix_00009574	chr10	+	3405	10	FSM	ENSG00000166024.14	ENST00000298999.8	3393	10	-12	0	-12	0	multi-exon	FALSE	canonical	3	25	junction_1	37.8388395405802	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGTGGTGTTTGTTGGT	-25	True	NA	20	True	ATTAAA	-20	NA	98134644	98244897	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_98134707_98156092_98156148_98162882_98162976_98163292_98163398_98208100_98209900_98231511_98231688_98234445_98234517_98235424_98235521_98236023_98236165_98244090
H1_mix_00009575	chr10	+	3338	9	NIC	ENSG00000166024.14	novel	3393	10	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	40	junction_1	27.4883498049628	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCACTGTGGTGTTTGTT	-16	True	NA	17	True	ATTAAA	-17	NA	98134653	98244894	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_98134707_98162882_98162976_98163292_98163398_98208100_98209900_98231511_98231688_98234445_98234517_98235424_98235521_98236023_98236165_98244090
H1_mix_00009576	chr10	+	3419	10	NIC	ENSG00000166024.14	novel	3372	9	NA	NA	13	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_4	42.5049016781202	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCACTGTGGTGTTTGTT	0	True	NA	17	True	ATTAAA	-17	NA	98134669	98244894	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_98134707_98162882_98162976_98163292_98163398_98186466_98186564_98208100_98209900_98231511_98231688_98234445_98234517_98235424_98235521_98236023_98236165_98244090
H1_mix_00009578	chr10	+	3331	9	FSM	ENSG00000166024.14	ENST00000612478.4	3337	9	6	0	6	0	multi-exon	FALSE	canonical	1	2	junction_3	52.5153251441901	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCACTGTGGTGTTTGTT	NA	False	NA	17	True	ATTAAA	-17	NA	98163292	98244894	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_98163398_98186466_98186564_98208100_98209900_98211306_98211349_98231511_98231688_98234445_98234517_98235424_98235521_98236023_98236165_98244090
H1_mix_00009580	chr10	+	3332	3	FSM	ENSG00000224934.6	ENST00000657109.1	3338	3	6	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	0.5	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATCTGACTTTTGTTAAT	-10	True	NA	-39	True	TATAAA	-28	NA	99430935	99438065	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_99433632_99433739_99433941_99437630
H1_mix_00009581	chr10	+	3473	2	FSM	ENSG00000224934.6	ENST00000647895.1	3490	2	17	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTATTTCTAATCACTAT	-10	True	NA	-6	True	AATAAA	-1	NA	99430935	99438098	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_99433941_99437630
H1_mix_00009583	chr10	+	8548	13	FSM	ENSG00000198018.7	ENST00000370489.5	8548	13	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	6.51280789419331	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACTCATGAGTTGCTACT	15	True	NA	25	True	AATAAA	-33	NA	99659508	99711241	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_99659589_99659861_99659965_99661445_99661629_99679260_99679467_99679724_99679876_99685791_99685896_99688693_99688751_99691384_99691519_99695955_99696123_99698533_99698859_99700972_99701059_99702511_99702674_99704451
H1_mix_00009585	chr10	+	1257	8	FSM	ENSG00000119929.13	ENST00000471520.5	831	8	0	-426	0	0	multi-exon	FALSE	canonical	3	91	junction_6	78.4044979967505	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATAGTCTCTTATTCTTGC	15	True	NA	NA	False	AATAAA	-17	NA	99732280	99756134	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_99732410_99736245_99736318_99739709_99739770_99743152_99743363_99744036_99744073_99747256_99747391_99754528_99754635_99755624
H1_mix_00009586	chr10	+	1232	9	NNC	ENSG00000119929.13	novel	1332	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	103.460665834896	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATAGTCTCTTATTCTTGC	15	True	NA	NA	False	AATAAA	-17	NA	99732280	99756134	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_99732357_99736245_99736318_99739709_99739770_99743152_99743363_99744036_99744073_99747256_99747391_99750368_99750397_99754528_99754635_99755624
H1_mix_00009590	chr10	+	1030	3	FSM	ENSG00000235823.4	ENST00000663103.1	1022	3	-8	0	-8	0	multi-exon	FALSE	canonical	2	3	junction_2	85	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	4	True	NA	22	True	AATAAA	-22	NA	100373535	100388360	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_100374013_100381215_100381449_100388040
H1_mix_00009591	chr10	+	1037	3	FSM	ENSG00000235823.4	ENST00000657502.1	1015	3	-22	0	-8	0	multi-exon	FALSE	canonical	3	45	junction_2	64	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	4	True	NA	22	True	AATAAA	-22	NA	100373535	100388360	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_100374013_100381215_100381449_100388033
H1_mix_00009592	chr10	+	1164	4	FSM	ENSG00000235823.4	ENST00000641708.1	1184	4	20	0	-11	0	multi-exon	FALSE	canonical	3	55	junction_1	54.2176682969266	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	1	True	NA	22	True	AATAAA	-22	NA	100373532	100388360	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_100374013_100380982_100381110_100381215_100381449_100388036
H1_mix_00009594	chr10	+	6841	5	FSM	ENSG00000235823.4	ENST00000658059.1	5893	5	-33	-915	-8	-858	multi-exon	FALSE	canonical	1	1	junction_4	27.2614654778499	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCTGGTAATTAAATGAATA	4	True	NA	NA	False	AATAAA	-25	NA	100373535	100412531	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_100374013_100380982_100381110_100381215_100381449_100395108_100395230_100406648
H1_mix_00009595	chr10	+	2739	3	FSM	ENSG00000235823.4	ENST00000656449.1	2726	3	-13	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTATGTTAATTTTGCA	26	False	NA	17	True	TTTAAA	-14	NA	100373557	100383372	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_100374013_100380982_100381110_100381215
H1_mix_00009596	chr10	+	1752	4	FSM	ENSG00000235823.4	ENST00000666713.1	1752	4	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	19.3448241713959	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTATGTTAATTTTGCA	34	False	NA	17	True	TTTAAA	-14	NA	100373565	100383372	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_100374013_100380982_100381110_100381215_100381449_100382427
H1_mix_00009597	chr10	+	1134	4	FSM	ENSG00000235823.4	ENST00000661158.1	1133	4	-1	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	5.24933858267454	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	34	False	NA	22	True	AATAAA	-22	NA	100373565	100388360	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_100374013_100380982_100381110_100381215_100381449_100388033
H1_mix_00009603	chr10	+	15160	8	FSM	ENSG00000166135.14	ENST00000299163.7	12927	8	-12	-2221	-12	2221	multi-exon	TRUE	canonical	3	463	junction_3	52.9065406241641	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCGGGGAGCCCGTGGG	-11	True	NA	NA	False	NA	NA	NA	100535930	100562219	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_100536136_100536410_100536662_100540633_100540783_100544950_100545097_100545942_100546050_100546517_100546582_100547139_100547251_100548092
H1_mix_00009606	chr10	+	891	1	FSM	ENSG00000119906.13	ENST00000609386.1	891	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAACTTGGTACTGTCTTTT	29	False	NA	NA	False	AATAAA	-19	NA	100912995	100913886	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_100913000_100913900
H1_mix_00009608	chr10	+	4440	15	NIC	ENSG00000095539.15	novel	4656	16	NA	NA	2	-10	intron_retention	FALSE	canonical	2	5	junction_13	4.21670632661298	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTCCCCACAGCTATGA	3	True	NA	17	True	AATAAA	-5	NA	100969524	100985603	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_100969592_100972528_100973037_100973128_100973278_100973546_100973610_100977631_100977731_100978294_100978389_100978526_100978641_100978848_100979019_100979101_100979272_100979847_100979993_100980121_100980345_100980577_100980694_100980821_100980983_100981167_100981230_100983304
H1_mix_00009610	chr10	+	2564	5	FSM	ENSG00000107815.10	ENST00000311916.8	3616	5	1050	2	-595	0	multi-exon	FALSE	canonical	3	84	junction_4	14.972892172189	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGTTTCTGTGCTTTTT	1040	False	NA	12	True	ACTAAA	-15	NA	100988592	100994401	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_100989454_100989643_100989885_100990435_100990544_100990868_100991011_100993189
H1_mix_00009611	chr10	+	3664	5	FSM	ENSG00000107815.10	ENST00000370228.2	3665	5	0	1	0	-1	multi-exon	FALSE	canonical	3	27	junction_4	37.5566239164278	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTGTTTCTGTGCTTTT	-17	True	NA	11	True	ACTAAA	-14	NA	100987535	100994400	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_100989454_100989643_100989885_100990435_100990544_100990868_100991055_100993189
H1_mix_00009617	chr10	+	5741	4	FSM	ENSG00000107816.17	ENST00000370220.1	5741	4	0	0	0	0	multi-exon	FALSE	canonical	3	486	junction_1	57.0516335339216	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAATGTGCTGGATAAAG	127	False	NA	NA	False	ATTAAA	-25	NA	100999475	101007836	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_101002947_101003506_101004167_101005457_101005716_101006484
H1_mix_00009619	chr10	+	3460	5	NIC	ENSG00000107816.17	novel	5741	4	NA	NA	-263	0	combination_of_known_junctions	FALSE	canonical	3	334	junction_1	106.289698466032	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAATGTGCTGGATAAAG	526	False	NA	NA	False	ATTAAA	-25	NA	100999212	101007836	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_100999953_101002496_101002947_101003506_101004167_101005457_101005716_101006484
H1_mix_00009621	chr10	+	5982	14	FSM	ENSG00000166167.18	ENST00000408038.6	5982	14	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	30.7555738922847	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTCTTGTCTCCTTGCCCC	-23	True	NA	24	True	ATTAAA	-14	NA	101354106	101557321	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_101354229_101461980_101462059_101479367_101479458_101521638_101521871_101526012_101526200_101531236_101531334_101532294_101532433_101532951_101533071_101534660_101534911_101535353_101535473_101536542_101536654_101538292_101538372_101550698_101550892_101553154
H1_mix_00009622	chr10	+	6024	15	FSM	ENSG00000166167.18	ENST00000370187.8	6024	15	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	30.6454377867711	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTAAGCGTCTTGTCTC	35	True	NA	16	True	ATTAAA	-6	NA	101354164	101557313	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_101354229_101430344_101430453_101461980_101462059_101479367_101479458_101521638_101521871_101526012_101526200_101531236_101531334_101532294_101532433_101532951_101533071_101534660_101534911_101535353_101535473_101536542_101536654_101538292_101538372_101550698_101550892_101553154
H1_mix_00009623	chr10	+	831	6	FSM	ENSG00000166171.13	ENST00000370151.9	819	6	-12	0	0	0	multi-exon	FALSE	canonical	3	443	junction_2	25.5859336354959	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGACTGCCCTCTTGTTC	4	True	NA	32	True	AGTAAA	-24	NA	101588308	101609662	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_101588401_101594657_101594739_101600737_101600863_101601202_101601337_101608834_101608938_101609366
H1_mix_00009625	chr10	+	2688	1	FSM	ENSG00000166189.8	ENST00000299238.7	2688	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACAGTTGTGTGTTTTTA	-29	True	NA	8	True	AATATA	-17	NA	102065348	102068036	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_102065300_102068000
H1_mix_00009629	chr10	+	5149	14	NNC	ENSG00000148840.11	novel	5328	14	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_10	98.7922930180452	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAAAGGGGTATTTG	12	True	NA	15	True	AATAAA	-18	NA	102133059	102150180	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_102133222_102137849_102138039_102138618_102138766_102138878_102138981_102139099_102142005_102143044_102143099_102144249_102144308_102145019_102145091_102146671_102147393_102148371_102148522_102148633_102148695_102148816_102148939_102149177_102149330_102149925
H1_mix_00009630	chr10	+	3967	13	FSM	ENSG00000166197.17	ENST00000405356.5	3967	13	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_6	376.555182616779	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGGAGTTTTATTATTGT	-14	True	NA	16	True	AATAAA	-21	NA	102152175	102163871	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_102152531_102157018_102157075_102157188_102157329_102157430_102157556_102158048_102158215_102159192_102159339_102159432_102159569_102159895_102160025_102160232_102160344_102160451_102161094_102161555_102161663_102161832_102161926_102162110
H1_mix_00009631	chr10	+	2456	13	FSM	ENSG00000166197.17	ENST00000488254.6	2441	13	-15	0	0	0	multi-exon	FALSE	canonical	3	773	junction_2	231.493145446877	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTTGTGATTTTCAAA	-3	True	NA	5	True	ATTAAA	-15	NA	102152388	102162600	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_102152531_102157018_102157075_102157185_102157329_102157430_102157556_102158048_102158215_102159192_102159309_102159432_102159569_102159895_102160025_102160232_102160344_102160451_102161094_102161555_102161663_102161832_102161926_102162110
H1_mix_00009633	chr10	+	3726	13	NIC	ENSG00000166197.17	novel	3727	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	245	junction_6	374.984101514836	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTGGGAGTTTTATT	6	False	NA	11	True	AATAAA	-16	NA	102152414	102163866	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_102152531_102157018_102157075_102157185_102157329_102157430_102157556_102158048_102158215_102159192_102159339_102159432_102159569_102159895_102160025_102160232_102160344_102160451_102161094_102161555_102161663_102161832_102161926_102162110
H1_mix_00009639	chr10	+	3133	22	FSM	ENSG00000077150.20	ENST00000652277.1	3114	22	-13	-6	-13	5	multi-exon	FALSE	canonical	3	40	junction_8	9.36050466689952	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCTGATGTGACTCTTGT	5	True	NA	34	True	NA	NA	NA	102395679	102402529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_102395981_102396252_102396335_102396448_102396490_102396724_102396824_102396903_102397056_102397301_102397409_102397526_102397686_102397980_102398086_102398211_102398298_102398384_102398524_102398738_102398865_102399287_102399498_102399576_102399719_102400079_102400195_102400277_102400492_102400654_102400825_102400946_102401050_102401179_102401332_102401448_102401519_102401744_102401918_102402047_102402160_102402254
H1_mix_00009640	chr10	+	3036	23	FSM	ENSG00000077150.20	ENST00000189444.11	3012	23	-25	1	-13	0	multi-exon	TRUE	canonical	3	25	junction_1	10.8467918096543	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCAGCCCCTGATGTGAC	5	True	NA	28	True	AATAAA	-41	NA	102395679	102402523	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_102395797_102395887_102395981_102396252_102396335_102396448_102396490_102396724_102396824_102396903_102397056_102397301_102397409_102397526_102397686_102397980_102398086_102398211_102398298_102398384_102398524_102398738_102398865_102399287_102399498_102399576_102399719_102400079_102400195_102400277_102400492_102400654_102400825_102400946_102401050_102401179_102401332_102401448_102401519_102401744_102401918_102402047_102402160_102402254
H1_mix_00009646	chr10	+	1177	2	FSM	ENSG00000269609.6	ENST00000657934.1	1177	2	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCCAGGACTGTAAGAAAA	211	False	NA	-21	True	NA	NA	NA	102450067	102456250	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_102450331_102455336
H1_mix_00009647	chr10	+	6125	1	FSM	ENSG00000269609.6	ENST00000598368.1	2453	1	-3714	42	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCCAGGACTGTAAGAAAA	269	False	NA	-21	True	NA	NA	NA	102450125	102456250	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_102450100_102456200
H1_mix_00009648	chr10	+	2313	2	FSM	ENSG00000269609.6	ENST00000659211.1	2313	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATAAACTTGTCTTGTT	143	False	NA	-6	True	NA	NA	NA	102450803	102456265	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_102452188_102455336
H1_mix_00009661	chr10	+	2081	2	FSM	ENSG00000148842.18	ENST00000369875.3	2059	2	-23	1	0	-1	multi-exon	FALSE	canonical	1	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTGCGTGGTGGTGGGT	-13	True	NA	NA	False	AATAAA	-15	NA	102918293	102927617	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_102920102_102927344
H1_mix_00009663	chr10	+	3857	7	FSM	ENSG00000148842.18	ENST00000433628.2	3857	7	0	0	0	0	multi-exon	TRUE	canonical	3	43	junction_2	4.76095228569523	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGGGCCCGGCAGTGGC	3	True	NA	NA	False	NA	NA	NA	102918356	103078351	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_102920102_103049706_103049851_103054328_103054467_103056794_103056965_103068628_103068723_103076085_103076271_103076970
H1_mix_00009666	chr10	+	4101	2	NNC	ENSG00000148798.11	novel	3251	3	NA	NA	19	-7424	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTAACATTTATTGAGTTC	-1	True	NA	1	True	AATAAA	-4	NA	103277156	103282922	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_103278277_103279941
H1_mix_00009668	chr10	+	6471	36	FSM	ENSG00000148843.15	ENST00000649849.1	6467	36	-4	0	-4	0	multi-exon	TRUE	canonical	3	61	junction_31	59.308560142044	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTGGCAGAGCTTTAA	-28	True	NA	4	True	ATTAAA	-4	NA	103396621	103446281	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_103396731_103398415_103398529_103400396_103400529_103403117_103403286_103405021_103405184_103405984_103406109_103406608_103406791_103409698_103409807_103413115_103413323_103413965_103414091_103414269_103414331_103415004_103415152_103416490_103416743_103417791_103417933_103418439_103418635_103419537_103419709_103421347_103421568_103422987_103423138_103423542_103423659_103424983_103425526_103427328_103427392_103432128_103432235_103433947_103434038_103434247_103434351_103434797_103434976_103438014_103438072_103438685_103438809_103439745_103439869_103440289_103440582_103440733_103440851_103441825_103441976_103442209_103442461_103443164_103443334_103443914_103444069_103444516_103444683_103445377
H1_mix_00009673	chr10	+	7673	18	FSM	ENSG00000065613.15	ENST00000335753.8	7673	18	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_12	47.5209660521845	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGGAAGCAGTCTTTTA	34	True	NA	11	True	AATAAA	-17	NA	103967200	104029233	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_103967896_103990674_103990840_103992597_103992647_103992983_103993134_103998898_103998972_103999118_103999314_103999866_103999949_104001443_104001573_104002171_104003528_104005560_104005692_104005911_104006036_104008176_104008357_104018159_104018290_104018783_104018909_104019733_104019923_104020487_104020614_104021619_104021734_104025573
H1_mix_00009674	chr10	+	1510	4	FSM	ENSG00000156384.15	ENST00000369729.7	1503	4	-7	0	-7	0	multi-exon	FALSE	canonical	3	28	junction_1	50.7630661888039	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCCCTGTCTCTTCAAA	12	True	NA	12	True	ATTAAA	-21	NA	104122050	104126385	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_104122155_104122964_104123087_104123713_104124125_104125512
H1_mix_00009675	chr10	+	1444	4	FSM	ENSG00000156384.15	ENST00000369727.4	1430	4	-14	0	-14	0	multi-exon	FALSE	canonical	3	67	junction_1	32.5610537640019	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTTCCCTGTCTCTTCA	-6	True	NA	10	True	ATTAAA	-19	NA	104122156	104126383	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_104122197_104122964_104123087_104123713_104124125_104125512
H1_mix_00009676	chr10	+	1052	6	FSM	ENSG00000148834.13	ENST00000539281.5	1052	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	346.124486276253	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATAGCATGCTTTTATT	17	False	NA	24	True	AATAAA	-32	NA	104254193	104267459	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_104254500_104255162_104255272_104259575_104259799_104262978_104263078_104266083_104266191_104267251
H1_mix_00009677	chr10	+	846	5	FSM	ENSG00000148834.13	ENST00000369710.8	900	5	54	0	54	0	multi-exon	FALSE	canonical	3	61	junction_3	353.458979232386	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATAGCATGCTTTTATT	587	False	NA	24	True	AATAAA	-32	NA	104254763	104267459	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_104254963_104255162_104255272_104259575_104259799_104266083_104266191_104267251
H1_mix_00009678	chr10	+	813	6	FSM	ENSG00000148834.13	ENST00000369713.10	813	6	0	0	0	0	multi-exon	FALSE	canonical	3	783	junction_1	54.2387315485899	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAATAATAGCATGCTTT	-5	True	NA	20	True	AATAAA	-28	NA	104254891	104267455	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_104254963_104255162_104255272_104259575_104259799_104262978_104263078_104266083_104266191_104267251
H1_mix_00009679	chr10	+	829	5	FSM	ENSG00000148834.13	ENST00000445155.5	829	5	0	0	0	0	multi-exon	FALSE	canonical	3	822	junction_2	41.7933906257915	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTACAGAACAGCCCTGAGG	89	False	NA	-70	True	NA	NA	NA	104254985	104267365	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_104255272_104259575_104259799_104262978_104263078_104266083_104266191_104267251
H1_mix_00009681	chr10	+	877	6	ISM	ENSG00000065621.15	ENST00000338595.7	6715	7	5714	5539	0	0	3prime_fragment	FALSE	canonical	3	69	junction_1	25.9846108302587	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTATTCTTCTGATAAT	-1	True	NA	11	True	AATAAA	-12	NA	104274897	104299411	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_+_104274950_104275225_104275335_104277893_104278117_104279369_104279472_104297577_104297685_104299127
H1_mix_00009682	chr10	+	768	5	NIC	ENSG00000065621.15	novel	6715	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	35.7657308047802	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTATTCTTCTGATAAT	-1	True	NA	11	True	AATAAA	-12	NA	104274897	104299411	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_104274950_104277893_104278117_104279369_104279472_104297577_104297685_104299127
H1_mix_00009685	chr10	+	6423	5	FSM	ENSG00000065621.15	ENST00000369707.2	6423	5	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_3	24.8231242997331	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATACTCAGAATCTCGCTA	9	True	NA	9	True	AATAAA	-23	NA	104275161	104304945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_104275335_104277893_104278117_104279369_104279472_104297577_104297685_104299127
H1_mix_00009695	chr10	+	2652	6	FSM	ENSG00000119950.21	ENST00000239007.11	2424	6	-78	-150	-78	40	multi-exon	FALSE	canonical	3	40	junction_1	26.5781865446083	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTATCCCTTTGTGAGTG	NA	False	NA	47	True	AATAAA	-44	NA	110225914	110286656	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_110226284_110228188_110228322_110244827_110244858_110279179_110279295_110279913_110280086_110284823
H1_mix_00009696	chr10	+	782	6	FSM	ENSG00000119950.21	ENST00000460667.5	782	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	44.0199954566104	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCATCAGTGACATTGATG	10	False	NA	NA	False	AATATA	-9	NA	110226034	110284890	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_110226284_110228188_110228322_110244827_110244874_110279179_110279295_110279913_110280086_110284823
H1_mix_00009700	chr10	+	4342	12	FSM	ENSG00000232470.1_ENSG00000150593.18	ENST00000280154.12	3481	12	-862	1	-729	0	multi-exon	FALSE	canonical	3	123	junction_2	21.5966021202525	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAAAAGTTGTATTTAAT	NA	False	NA	NA	False	AATAAA	-19	NA	110871065	110900005	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_110872019_110875965_110876071_110881232_110881536_110883002_110883098_110885252_110885367_110887664_110887887_110889532_110889631_110890555_110890671_110894090_110894199_110894411_110894523_110895947_110896088_110898027
H1_mix_00009705	chr10	+	4174	8	FSM	ENSG00000151532.14	ENST00000393077.3	4174	8	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_7	10.259888211986	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGTTTATCGCTTTTT	-26	True	NA	13	True	ATTAAA	-18	NA	112447214	112818744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_112447468_112460523_112460583_112464546_112464658_112527086_112527165_112538245_112538331_112668217_112668289_112668936_112668999_112815289
H1_mix_00009708	chr10	+	4014	13	FSM	ENSG00000148737.17	ENST00000536810.5	3953	13	-61	0	-58	0	multi-exon	FALSE	canonical	3	51	junction_11	68.2511701161396	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGTCACTTGTTTCTGT	NA	False	NA	19	True	AATAAA	-25	NA	112950188	113167678	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150997_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113159919_113159993_113165554
H1_mix_00009709	chr10	+	3856	12	NIC	ENSG00000148737.17	novel	4136	15	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_6	69.0143116071701	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGTCACTTGTTTCTGT	5	True	NA	19	True	AATAAA	-25	NA	112950261	113167678	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113141183_113141317_113143922_113144014_113146010_113146098_113150997_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113165554
H1_mix_00009710	chr10	+	3802	14	FSM	ENSG00000148737.17	ENST00000369397.8	3802	14	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_12	77.6142791718183	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGTCACTTGTTTCTGT	96	False	NA	19	True	AATAAA	-25	NA	112950451	113167678	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150997_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113158666_113158718_113159919_113159993_113165554
H1_mix_00009712	chr10	+	3373	12	NIC	ENSG00000148737.17	novel	3953	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	104	junction_11	46.4284751611026	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGTCACTTGTTTCTGT	65	False	NA	19	True	AATAAA	-25	NA	112950756	113167678	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150997_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113165554
H1_mix_00009718	chr10	+	1336	3	ISM	ENSG00000196865.4	ENST00000369301.3	11051	11	-183	40064	-183	18278	5prime_fragment	FALSE	canonical	3	164	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGATGTCTGAATTAACCT	NA	False	NA	NA	False	AATAAA	-18	NA	113854477	113877130	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_+_113855051_113858527_113858681_113876520
H1_mix_00009719	chr10	+	11051	11	FSM	ENSG00000196865.4	ENST00000369301.3	11051	11	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_10	35.6456168413453	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTTTCTGTTTTAATGT	16	True	NA	17	True	ATTAAA	-17	NA	113854660	113917194	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_113855051_113858527_113858681_113876520_113876977_113879573_113879696_113884250_113884381_113898109_113898210_113901665_113901898_113902470_113902594_113903526_113903737_113904816_113905037_113908279
H1_mix_00009724	chr10	+	1818	8	FSM	ENSG00000107518.18	ENST00000609571.5	1818	8	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	6.1145527311522	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGAGTTATTTGAGATTG	12	True	NA	24	True	AATAAA	-25	NA	115093364	115171376	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_115094044_115120184_115120269_115121698_115121813_115127592_115127722_115129326_115129536_115160039_115160215_115165557_115165646_115171036
H1_mix_00009734	chr10	+	2488	9	NIC	ENSG00000119979.18	novel	2441	9	NA	NA	0	0	intron_retention	TRUE	canonical	3	200	junction_1	88.9550448260243	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTTTAGGTGGGTGACG	-12	True	NA	10	True	AATAAA	-23	NA	119104085	119137984	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_119104198_119107947_119108165_119111848_119111929_119117518_119117668_119120340_119120453_119123468_119123570_119129514_119129623_119132514_119132610_119136470
H1_mix_00009735	chr10	+	2441	9	FSM	ENSG00000119979.18	ENST00000361432.3	2441	9	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_1	79.3579706141733	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTTTAGGTGGGTGACG	15	True	NA	10	True	AATAAA	-23	NA	119104112	119137984	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_119104198_119107967_119108165_119111848_119111929_119117518_119117668_119120340_119120453_119123468_119123570_119129514_119129623_119132514_119132610_119136470
H1_mix_00009737	chr10	+	2424	9	NNC	ENSG00000119979.18	novel	2441	9	NA	NA	8	-1	intron_retention	FALSE	canonical	2	2	junction_3	159.600281954638	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTTTTAGGTGGGTGAC	27	False	NA	9	True	AATAAA	-22	NA	119104124	119137983	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_119104198_119107967_119108165_119111848_119111925_119117518_119117668_119120340_119120453_119123468_119123570_119129514_119129623_119132514_119132610_119136470
H1_mix_00009743	chr10	+	874	5	FSM	ENSG00000198825.15	ENST00000369081.3	874	5	0	0	0	0	multi-exon	TRUE	canonical	3	74	junction_4	11.1214882097676	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTACTGAGATTGGTGTGA	24	False	NA	7	True	AATAAA	-15	NA	119726161	119792197	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_119726360_119751075_119751157_119781634_119781772_119791516_119791646_119791868
H1_mix_00009744	chr10	+	3693	6	FSM	ENSG00000198825.15	ENST00000650409.1	3693	6	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_1	30.2086080447279	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGGGTATGAGAATTCC	9	True	NA	17	True	AATAAA	-23	NA	119818726	119829147	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_119819540_119820845_119820918_119822430_119822505_119823070_119823200_119823814_119823903_119826630
H1_mix_00009745	chr10	+	7254	19	FSM	ENSG00000107651.14	ENST00000369075.8	7148	19	0	-106	0	106	multi-exon	FALSE	canonical	3	270	junction_8	33.9081912242273	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTACTCTCCTATGCCGCT	-4	True	NA	NA	False	NA	NA	NA	119892729	119944763	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_119892946_119898426_119898960_119902798_119903010_119904083_119904278_119909040_119909131_119912043_119912165_119914729_119914820_119915747_119915890_119917835_119918045_119918392_119918512_119919443_119919597_119920888_119920985_119926035_119926228_119929606_119929763_119930328_119930432_119932132_119932319_119933004_119933168_119933685_119933788_119940585
H1_mix_00009746	chr10	+	7581	19	NIC	ENSG00000107651.14	novel	7148	19	NA	NA	-144	106	intron_retention	FALSE	canonical	3	43	junction_1	76.6153008281483	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTACTCTCCTATGCCGCT	8688	False	NA	NA	False	NA	NA	NA	119892585	119944763	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_119892946_119898243_119898960_119902798_119903010_119904083_119904278_119909040_119909131_119912043_119912165_119914729_119914820_119915747_119915890_119917835_119918045_119918392_119918512_119919443_119919597_119920888_119920985_119926035_119926228_119929606_119929763_119930328_119930432_119932132_119932319_119933004_119933168_119933685_119933788_119940585
H1_mix_00009747	chr10	+	1526	4	ISM	ENSG00000107651.14	ENST00000369075.8	7148	19	13	39995	-2	0	5prime_fragment	FALSE	canonical	3	358	junction_1	6.64997911442	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTTGAGTCTTATTAGC	9	True	NA	12	True	AATAAA	-19	NA	119892742	119904662	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_+_119892946_119898426_119898960_119902798_119903010_119904083
H1_mix_00009748	chr10	+	3425	7	FSM	ENSG00000203805.11	ENST00000398250.6	3458	7	0	33	0	-33	multi-exon	FALSE	canonical	3	14	junction_3	6.87184270936277	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAGTGTACCAATTAAATG	-10	True	NA	NA	False	AGTAAA	-9	NA	120457226	120592032	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_120457362_120503817_120503927_120513910_120514002_120518832_120518897_120520970_120521096_120575130_120575302_120589302
H1_mix_00009752	chr10	+	3731	16	NIC	ENSG00000138162.19	novel	3685	17	NA	NA	-135	0	intron_retention	FALSE	canonical	3	34	junction_1	42.2703468429373	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGTGTGCCTCGAATTT	-2	True	NA	NA	False	AATAAA	-41	NA	122112894	122254540	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_122113234_122132608_122132735_122195039_122195177_122210396_122211709_122215390_122215452_122216626_122216829_122224725_122224788_122226365_122226482_122227836_122228009_122237394_122237539_122237960_122238038_122241957_122242002_122248642_122248804_122249049_122249157_122249543_122249665_122253990
H1_mix_00009753	chr10	+	3718	15	NIC	ENSG00000138162.19	novel	3979	16	NA	NA	-52	-1	intron_retention	FALSE	canonical	3	78	junction_1	28.3484153536176	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAATAAGTGTGCCTCGAA	40	False	NA	NA	False	AATAAA	-38	NA	122163537	122254537	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_122163993_122195039_122195177_122210396_122211709_122215390_122215452_122216626_122216829_122224725_122224788_122226365_122226482_122227836_122228009_122237394_122237539_122237960_122238038_122241957_122242002_122248642_122248804_122249049_122249157_122249543_122249665_122253990
H1_mix_00009755	chr10	+	3109	4	FSM	ENSG00000138162.19	ENST00000465600.1	3109	4	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	13.1993265821489	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGTGTGCCTCGAATTT	8962	False	NA	NA	False	AATAAA	-41	NA	122246472	122254540	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_122248804_122249049_122249157_122249543_122249665_122253990
H1_mix_00009759	chr10	+	3872	12	FSM	ENSG00000107679.15	ENST00000368988.5	3872	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_11	86.097004680047	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTCATTTTGTTTGGTT	732	False	NA	23	True	AATAAA	-24	NA	122393104	122432354	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_122393342_122397917_122397975_122400342_122400389_122406575_122406674_122412919_122413046_122415858_122416003_122417899_122417969_122424198_122424264_122424895_122424960_122426941_122427032_122428275_122428421_122429623
H1_mix_00009762	chr10	+	1170	6	FSM	ENSG00000179988.15	ENST00000406217.8	1173	6	3	0	3	0	multi-exon	FALSE	canonical	3	59	junction_2	22.1846793981793	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATGTCTCATTTTGGTA	-15	True	NA	13	True	ATTAAA	-17	NA	122980403	122990390	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_122980696_122982732_122983025_122983271_122983471_122986299_122986376_122986868_122986963_122990173
H1_mix_00009763	chr10	+	1341	7	FSM	ENSG00000179988.15	ENST00000368887.7	1705	7	364	0	3	0	multi-exon	FALSE	canonical	3	25	junction_6	33.1934565171444	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATGTCTCATTTTGGTA	-15	True	NA	13	True	ATTAAA	-17	NA	122980403	122990390	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_122980696_122982732_122983025_122983271_122983471_122986299_122986376_122986868_122986963_122987333_122987505_122990173
H1_mix_00009767	chr10	+	1374	8	FSM	ENSG00000154473.18	ENST00000368858.9	1361	8	-13	0	0	0	multi-exon	TRUE	canonical	3	950	junction_7	515.023835390565	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGATGTTTTTGAATGT	14	True	NA	30	True	AATAAA	-21	NA	123154401	123165365	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_123154486_123154917_123155113_123155657_123155728_123157728_123157881_123160406_123160566_123162235_123162414_123162611_123162829_123165046
H1_mix_00009769	chr10	+	790	2	FSM	ENSG00000154473.18	ENST00000481952.1	790	2	0	0	0	0	multi-exon	FALSE	canonical	3	2250	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGACCTTCAGGTCTT	7255	False	NA	NA	False	NA	NA	NA	123162253	123163241	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_123162414_123162611
H1_mix_00009773	chr10	+	2975	9	FSM	ENSG00000165660.8	ENST00000298492.6	2955	9	-20	0	-20	0	multi-exon	FALSE	canonical	3	86	junction_8	12.854352375752	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCATTGTTTTAATGTCT	NA	False	NA	15	True	AATAAA	-18	NA	124801798	124836667	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_124801902_124806830_124806922_124816575_124816613_124819383_124819451_124826594_124826786_124828755_124828876_124829392_124829478_124831348_124831464_124834501
H1_mix_00009774	chr10	+	5736	10	NIC	ENSG00000019995.6	novel	5695	9	NA	NA	-25225	0	combination_of_known_splicesites	TRUE	canonical	3	65	junction_1	25.6995940785544	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTGTCAGCGGTCTTGA	4	True	NA	10	True	ATTAAA	-21	NA	124916897	124988189	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_124917273_124942456_124943308_124966593_124966782_124971964_124972119_124973644_124973717_124974199_124974399_124981708_124981830_124983174_124983305_124983458_124983689_124984773
H1_mix_00009779	chr10	+	4399	24	FSM	ENSG00000107938.18	ENST00000337623.7	4387	24	-12	0	-11	0	multi-exon	TRUE	canonical	3	46	junction_6	27.4027581297776	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTGTATTTTTCCAAT	144	False	NA	15	True	AATAAA	-19	NA	125719690	125764139	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_125719916_125721203_125721413_125723067_125723135_125723810_125723937_125725317_125725443_125725681_125725839_125729357_125729480_125730287_125730400_125733403_125733552_125733634_125733744_125734071_125734184_125735643_125735905_125737917_125737990_125738294_125738446_125740462_125740652_125741000_125741202_125743057_125743277_125745706_125745931_125747535_125747695_125747862_125748013_125749411_125749566_125752798_125752915_125753693_125753846_125763300
H1_mix_00009782	chr10	+	1380	4	FSM	ENSG00000107938.18	ENST00000368812.1	1380	4	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_3	26.3354429534716	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATTTTTCCAATTTCC	8814	False	NA	19	True	AATAAA	-23	NA	125749296	125764143	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_125749566_125752798_125752915_125753693_125753846_125763300
H1_mix_00009784	chr10	+	2361	7	FSM	ENSG00000107949.17	ENST00000299130.7	2337	7	-24	0	-24	0	multi-exon	FALSE	canonical	3	646	junction_6	358.570619109945	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTCTCCATCTCTTTAT	NA	False	NA	15	True	AATAAA	-20	NA	125823521	125842805	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_125823723_125826590_125826666_125827557_125827639_125830561_125830652_125831419_125831608_125833771_125833947_125841254
H1_mix_00009785	chr10	+	1457	8	FSM	ENSG00000107949.17	ENST00000368759.5	1433	8	-24	0	-24	0	multi-exon	FALSE	canonical	3	539	junction_7	457.269446758446	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTAGTAGTTGAGTCTT	NA	False	NA	7	True	ATTAAA	-18	NA	125823521	125853695	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_125823723_125826590_125826666_125827557_125827639_125830561_125830652_125831419_125831608_125833771_125833947_125841254_125841331_125853124
H1_mix_00009788	chr10	+	6797	52	FSM	ENSG00000150760.13	ENST00000280333.9	6797	52	0	0	0	0	multi-exon	TRUE	canonical	3	108	junction_40	17.3989972621576	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAGTGTCTGACCAATTA	NA	False	NA	17	True	AATAAA	-18	NA	126905408	127452517	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_126905564_126970701_126970786_126977947_126977989_126981917_126981974_126987520_126987618_126990454_126990604_126996747_126996884_126998091_126998250_126999353_126999436_127000171_127000308_127008731_127008805_127012294_127012375_127018709_127018836_127023199_127023325_127024684_127024784_127026351_127026425_127031649_127031754_127032136_127032321_127037718_127037817_127042624_127042715_127043063_127043165_127052680_127052816_127061667_127061777_127106230_127106302_127110247_127110355_127125473_127125602_127127668_127127765_127248007_127248110_127257334_127257430_127339005_127339085_127343645_127343747_127354668_127354728_127362063_127362213_127373780_127373867_127374057_127374215_127380081_127380123_127381277_127381369_127384789_127384910_127403054_127403145_127404324_127404430_127409036_127409179_127409312_127409392_127410839_127410925_127415151_127415239_127418364_127418542_127419665_127419750_127425873_127426012_127433282_127433429_127439026_127439226_127444125_127444280_127447393_127447546_127451331
H1_mix_00009789	chr10	+	3607	32	NIC	ENSG00000150760.13	novel	6840	52	NA	NA	11	-98	combination_of_known_junctions	FALSE	canonical	2	3	junction_31	34.8743545250372	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCTCTGTTTGTCATTT	-2	True	NA	19	True	NA	NA	NA	126905438	127344502	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_126905564_126970701_126970786_126977947_126977989_126981917_126981974_126987520_126987618_126990454_126990604_126996747_126996884_126998091_126998250_126999353_126999436_127000171_127000308_127008731_127008805_127012231_127012375_127018709_127018836_127023199_127023325_127024684_127024784_127026351_127026425_127031649_127031754_127032136_127032321_127037718_127037817_127042624_127042715_127043063_127043165_127052680_127052816_127061667_127061777_127106230_127106302_127110247_127110355_127125473_127125602_127127668_127127765_127248007_127248110_127257334_127257430_127339005_127339085_127343645_127343747_127344198
H1_mix_00009800	chr10	+	5374	9	FSM	ENSG00000175470.20	ENST00000455566.6	5374	9	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_3	30.5859444843542	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCACTGCGTATTTGGAC	-1	True	NA	9	True	AATAAA	-20	NA	131901007	131959834	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_131901156_131901237_131901331_131934457_131934556_131940030_131940197_131940581_131940695_131943967_131944146_131945294_131945460_131947529_131947792_131955683
H1_mix_00009801	chr10	+	2347	8	NIC	ENSG00000175470.20	novel	5374	9	NA	NA	-350	0	intron_retention	FALSE	canonical	3	78	junction_2	68.1469001496033	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGTCTTTTTATTTAAT	NA	False	NA	36	True	AATAAA	-39	NA	131900657	131956555	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_131901156_131901237_131901331_131940030_131940197_131940581_131940695_131943967_131944146_131945294_131945460_131947529_131947792_131955683
H1_mix_00009805	chr10	+	2738	1	FSM	ENSG00000188385.13	ENST00000654224.1	2981	1	192	51	192	-47	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCGTTTGTAAATTATTGT	NA	False	NA	NA	False	NA	NA	NA	132182020	132184758	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_132182000_132184800
H1_mix_00009808	chr10	+	7684	11	FSM	ENSG00000148814.18	ENST00000368614.8	7971	11	-18	305	-18	-305	multi-exon	FALSE	canonical	2	7	junction_8	7.863841300535	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGCTGAGTCTTCTGG	-4	True	NA	NA	False	AAAAAG	-25	NA	132332174	132381203	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_132332257_132333476_132333735_132337564_132337696_132342212_132342272_132344497_132344651_132347983_132348357_132351606_132351754_132355789_132355887_132361456_132361576_132365423_132365551_132375065
H1_mix_00009811	chr10	+	3759	3	FSM	ENSG00000171813.14	ENST00000305233.6	2615	3	-1146	2	-1114	-2	multi-exon	FALSE	canonical	3	55	junction_1	1	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAATCTGCTCTTTCTTT	NA	False	NA	61	True	AATAAA	-16	NA	132396053	132417857	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_132397352_132404625_132406290_132417060
H1_mix_00009812	chr10	+	2559	3	NNC	ENSG00000171813.14	novel	2615	3	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	26	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAATCTGCTCTTTCTTT	-17	True	NA	61	True	AATAAA	-16	NA	132397200	132417857	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_132397299_132404625_132406290_132417060
H1_mix_00009823	chr10	+	1103	6	FSM	ENSG00000198546.15	ENST00000361518.10	1084	6	-19	0	-19	0	multi-exon	FALSE	canonical	3	482	junction_5	34.8137903710584	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTTGAGTCTTCATTTC	-21	True	NA	30	True	TTTAAA	-27	NA	133308894	133313161	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_133309097_133309389_133309464_133309775_133309978_133310163_133310289_133311715_133311842_133312787
H1_mix_00009824	chr10	+	2004	5	FSM	ENSG00000198546.15	ENST00000359035.4	2004	5	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_4	34.5687720348872	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTGAGTCTTCATTTCT	25	True	NA	31	True	TTTAAA	-28	NA	133308940	133313162	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_133309097_133309389_133309464_133309775_133309978_133310163_133310289_133311715
H1_mix_00009829	chr10	+	2730	10	FSM	ENSG00000148824.19	ENST00000460848.5	2730	10	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_6	53.7031162164546	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTGCAGATCACGAAGTG	-11	True	NA	NA	False	NA	NA	NA	133394195	133421307	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_133394333_133395712_133395778_133396162_133396268_133398434_133398516_133399169_133399227_133399528_133399620_133401528_133402246_133402691_133402774_133419479_133419593_133420025
H1_mix_00009833	chr10	-	5963	18	FSM	ENSG00000107929.16	ENST00000316157.8	5963	18	0	0	0	0	multi-exon	FALSE	canonical	2	137	junction_6	36.1361324605187	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTCTAAACATAGTTTT	-4	True	NA	-14	True	ATTAAA	-18	NA	931705	809496	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_813214_814741_814851_814945_815071_817724_817890_820799_820846_825064_825317_825763_825871_829384_829595_829680_829735_830866_830978_836402_836507_842931_843069_844976_845056_863742_863884_864122_864271_884446_884507_885640_885761_931427
H1_mix_00009844	chr10	-	3427	27	FSM	ENSG00000107959.17	ENST00000224949.9	3427	27	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_9	15.7659002111347	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGCTTGAGTCATTATT	0	True	NA	-4	True	AATAAA	-18	NA	3172782	3137727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_3138125_3138234_3138338_3138903_3139050_3140686_3140813_3143388_3143502_3144291_3144367_3145595_3145717_3147149_3147251_3147571_3147738_3147986_3148064_3148170_3148292_3149620_3149754_3151246_3151364_3155590_3155730_3156929_3157065_3157434_3157532_3158039_3158154_3158913_3159043_3159847_3159937_3160203_3160331_3163724_3163886_3165237_3165335_3165412_3165528_3166228_3166381_3166935_3167043_3170103_3170207_3172716
H1_mix_00009845	chr10	-	3254	25	FSM	ENSG00000107959.17	ENST00000678436.1	3242	25	0	-12	0	0	multi-exon	FALSE	canonical	3	15	junction_9	30.6661005382527	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGCTTGAGTCATTATT	NA	False	NA	-4	True	AATAAA	-18	NA	3172807	3137727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_3138125_3138234_3138338_3138903_3139050_3140686_3140813_3143388_3143502_3144291_3144367_3145595_3145717_3147149_3147251_3147571_3147738_3149620_3149754_3151246_3151364_3155590_3155730_3156929_3157065_3157434_3157532_3158039_3158154_3158913_3159043_3159847_3159937_3160203_3160331_3163724_3163886_3165237_3165335_3165412_3165528_3166228_3166381_3166935_3167043_3170103_3170207_3172716
H1_mix_00009855	chr10	-	1646	7	FSM	ENSG00000134461.16	ENST00000380092.8	1646	7	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_6	13.4742552876052	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCTTCTTAAGTCAGTC	11	True	NA	1	True	AATAAA	-18	NA	5889871	5878086	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_5878288_5880297_5880377_5883005_5883168_5883968_5884078_5885722_5885766_5887846_5888068_5889040
H1_mix_00009856	chr10	-	1567	6	FSM	ENSG00000134461.16	ENST00000191063.8	1567	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	31.0328857826661	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGAGGAGGCAATAAAGT	-24	True	NA	-34	True	NA	NA	NA	5889906	5878121	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_5878288_5883005_5883168_5883968_5884078_5885722_5885766_5887846_5888068_5889040
H1_mix_00009871	chr10	-	5372	22	FSM	ENSG00000151461.20	ENST00000397053.6	5369	22	0	-3	0	2	multi-exon	FALSE	canonical	3	13	junction_21	49.629694497989	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGCGTGGTGTTGTTTTG	63	False	NA	-3	True	AATAAA	-16	NA	12043170	11920019	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_11921308_11929864_11929986_11931640_11931783_11936544_11936713_11942664_11942764_11943063_11943169_11948368_11948509_11952065_11952250_11955231_11955508_11956319_11956524_11959170_11959357_11964008_11964126_11967340_11967455_11979056_11979166_11997671_11997758_11999905_12000010_12001675_12001826_12004529_12004728_12014023_12014185_12028744_12029525_12035058_12035442_12042913
H1_mix_00009875	chr10	-	1379	10	FSM	ENSG00000165609.13	ENST00000491614.6	3195	10	-428	2244	-175	2	multi-exon	TRUE	canonical	3	1145	junction_2	84.2673581781284	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGGTGGTATGGAATT	NA	False	NA	-11	True	AATAAA	-14	NA	12196319	12167573	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_12167812_12170716_12170771_12170899_12170909_12172764_12172867_12173717_12173814_12177792_12177901_12179082_12179133_12184888_12184957_12186228_12186333_12195769
H1_mix_00009876	chr10	-	1258	8	FSM	ENSG00000165609.13	ENST00000378927.7	1258	8	0	0	0	0	multi-exon	FALSE	canonical	3	1295	junction_1	53.3276357500863	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCAGCTGTGTGGCCCTT	6	True	NA	-27	True	AATAAA	-3	NA	12195822	12170231	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_12170909_12172764_12172867_12173717_12173814_12177792_12177901_12179082_12179133_12184888_12184957_12186228_12186333_12195769
H1_mix_00009879	chr10	-	2791	3	FSM	ENSG00000151468.11	ENST00000378825.5	2747	3	-46	2	-46	0	multi-exon	FALSE	canonical	3	28	junction_2	0.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGTGAGATGATGAGTGT	NA	False	NA	-3	True	AATAAA	-23	NA	13001759	12896626	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_12898680_12998337_12998513_13001196
H1_mix_00009882	chr10	-	869	5	FSM	ENSG00000165623.10	ENST00000378681.8	870	5	0	1	0	0	multi-exon	FALSE	canonical	3	14	junction_3	4.9749371855331	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTGTATTATCTTCTCA	-1	True	NA	-5	True	AATAAA	-14	NA	13234374	13221766	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_13222201_13229610_13229710_13233537_13233634_13233734_13233801_13234200
H1_mix_00009884	chr10	-	1534	9	NIC	ENSG00000107537.14	novel	1541	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_4	133.718395798783	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGGCTTTCTCCTGTGAT	10	True	NA	-7	True	AATAAA	-20	NA	13300051	13277798	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_13278355_13280975_13281111_13283689_13283840_13288359_13288542_13291824_13291913_13294427_13294597_13295495_13295607_13298186_13298246_13299967
H1_mix_00009885	chr10	-	1544	9	FSM	ENSG00000107537.14	ENST00000263038.9	1541	9	0	-3	0	0	multi-exon	FALSE	canonical	3	356	junction_4	33.6414922380087	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTTTCTCCTGTGATTTC	-3	True	NA	-4	True	AATAAA	-23	NA	13300064	13277795	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_13278355_13280975_13281111_13283689_13283840_13288359_13288542_13291830_13291913_13294427_13294597_13295495_13295607_13298186_13298246_13299967
H1_mix_00009890	chr10	-	2387	8	FSM	ENSG00000086475.15	ENST00000378614.8	2387	8	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	1178.32149730895	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTCTTGTATAATCAGAT	13	True	NA	-18	True	AATAAA	-17	NA	13348280	13318079	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_13319357_13328350_13328451_13329697_13329789_13333816_13333972_13336242_13336351_13338704_13338809_13344757_13345029_13347999
H1_mix_00009901	chr10	-	2767	15	FSM	ENSG00000152457.18	ENST00000378258.5	2463	15	0	-304	0	12	multi-exon	FALSE	canonical	3	9	junction_13	9.63332862556672	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAAAAAT	15	True	NA	NA	False	NA	NA	NA	14954072	14907866	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_14909331_14919737_14919833_14922980_14923070_14926842_14926898_14928015_14928153_14932853_14932956_14934379_14934521_14934702_14934776_14935462_14935565_14936537_14936594_14939809_14939870_14945104_14945190_14947524_14947610_14949035_14949088_14953901
H1_mix_00009903	chr10	-	3373	4	FSM	ENSG00000176244.7	ENST00000356189.6	3370	4	0	-3	0	3	multi-exon	FALSE	canonical	3	42	junction_1	2.16024689946929	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTCTCTGTATTATTTC	-1	True	NA	0	True	ATTAAA	-24	NA	15088776	15075471	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_15078604_15078690_15078754_15078922_15079041_15088716
H1_mix_00009905	chr10	-	1873	12	NIC	ENSG00000152465.18	novel	5003	12	NA	NA	0	-10	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	20.1178346928111	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAAGGCTCTAATTTAGGA	-6	True	NA	6	True	AGTAAA	-23	NA	15168693	15106382	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_15106699_15109701_15109840_15112795_15112964_15119342_15119514_15128349_15128459_15130141_15130313_15132816_15132934_15133052_15133145_15133244_15133364_15135273_15135419_15141421_15141558_15168502
H1_mix_00009906	chr10	-	2457	13	FSM	ENSG00000152465.18	ENST00000378150.1	2457	13	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_11	25.3227774060342	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCGCTTGAACCTGAGAGG	7	True	NA	NA	False	NA	NA	NA	15168628	15108293	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_15109216_15109701_15109840_15112795_15112964_15119342_15119514_15128349_15128459_15130141_15130313_15132816_15132934_15133052_15133145_15133244_15133364_15135273_15135419_15140986_15141030_15141421_15141558_15168502
H1_mix_00009907	chr10	-	4184	8	FSM	ENSG00000148468.17	ENST00000378116.9	4182	8	0	-2	0	2	multi-exon	FALSE	canonical	3	214	junction_2	14.8103659230794	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGTGGTCATTTGAAT	-22	True	NA	-2	True	AATAAA	-21	NA	15371289	15211640	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_15214602_15215995_15216111_15220943_15221061_15248638_15248816_15254720_15254880_15275854_15275948_15283877_15284106_15370955
H1_mix_00009908	chr10	-	2308	14	FSM	ENSG00000148481.14	ENST00000477891.1	2307	14	0	-1	0	1	multi-exon	FALSE	canonical	3	7	junction_10	20.9866116803663	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGCATTTTTTACATTG	-9	True	NA	1	True	AATAAA	-21	NA	15860498	15778168	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_15779142_15782154_15782227_15786560_15786649_15789246_15789320_15796099_15796173_15816834_15816916_15821655_15821727_15833629_15833710_15834542_15834617_15837203_15837319_15841425_15841600_15843211_15843273_15847863_15847944_15860205
H1_mix_00009909	chr10	-	2369	15	FSM	ENSG00000148481.14	ENST00000277632.8	2364	15	0	-5	0	1	multi-exon	FALSE	canonical	3	50	junction_11	13.2003787824441	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGCATTTTTTACATTG	-18	True	NA	1	True	AATAAA	-21	NA	15860507	15778168	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_15779142_15782154_15782227_15786560_15786649_15789246_15789320_15796099_15796173_15816834_15816916_15821655_15821727_15833629_15833710_15834542_15834617_15837203_15837319_15838227_15838280_15841425_15841600_15843211_15843273_15847863_15847944_15860205
H1_mix_00009911	chr10	-	4119	8	FSM	ENSG00000148484.18	ENST00000377921.7	3919	8	-131	-69	-51	69	multi-exon	FALSE	canonical	3	535	junction_7	69.4012291839626	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGAGGGTTTTTTCTCTTT	22	False	NA	70	True	TATAAA	-5	NA	16817514	16590541	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_16593497_16695022_16695156_16752538_16752654_16752917_16753001_16754870_16754990_16764389_16764511_16782033_16782085_16816972
H1_mix_00009912	chr10	-	3730	9	FSM	ENSG00000148484.18	ENST00000345264.10	3730	9	0	0	0	0	multi-exon	FALSE	canonical	3	535	junction_7	75.5033111856692	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTATGTCATGGTATATT	-25	True	NA	1	True	ATTAAA	-24	NA	16817424	16590610	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_16593497_16695022_16695156_16752538_16752654_16752917_16753001_16754870_16754990_16764389_16764511_16782033_16782085_16816972_16817085_16817314
H1_mix_00009913	chr10	-	4386	8	FSM	ENSG00000148484.18	ENST00000602389.1	3639	8	71	-818	0	809	multi-exon	FALSE	canonical	3	202	junction_7	173.368311489071	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGATCTAGGAGAGAAGT	16	True	NA	NA	False	AATAAA	-14	NA	16817383	16589801	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_16593497_16695022_16695156_16752538_16752654_16752917_16753001_16754870_16754990_16764389_16764511_16782033_16782085_16817314
H1_mix_00009916	chr10	-	1298	9	FSM	ENSG00000107614.22	ENST00000495022.5	1374	9	76	0	76	0	multi-exon	FALSE	canonical	3	18	junction_7	93.0751544452116	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTTGGATTTTATTAAA	NA	False	NA	-45	True	ACTAAA	-24	NA	17201775	17148915	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_17149141_17153506_17153637_17154676_17154735_17157440_17157785_17159145_17159230_17160304_17160375_17162165_17162238_17174550_17174661_17201570
H1_mix_00009917	chr10	-	2543	11	NIC	ENSG00000107614.22	novel	1697	10	NA	NA	0	759	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	67.2059521173534	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCTAATTGTTTTTCAT	3	True	NA	NA	False	NA	NA	NA	17201657	17150654	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_17152100_17153506_17153637_17154676_17154735_17157440_17157785_17159145_17159230_17160304_17160375_17161482_17161549_17162165_17162238_17168840_17168918_17174550_17174661_17201570
H1_mix_00009922	chr10	-	563	3	NIC	ENSG00000165996.14	novel	459	4	NA	NA	-59	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_2	132	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATGGATTGTATGGTTT	86	False	NA	-8	True	AATAAA	-14	NA	17617294	17590274	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_17590447_17594204_17594384_17617082
H1_mix_00009926	chr10	-	773	2	FSM	ENSG00000165996.14	ENST00000326961.6	773	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTTTCTATTATGTGCT	13	True	NA	NA	False	AATAAA	-17	NA	17617367	17615476	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_17615965_17617082
H1_mix_00009939	chr10	-	2100	12	FSM	ENSG00000136770.11	ENST00000376980.8	2100	12	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_7	19.2731560844234	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGTGCTATACTGTTTA	-16	True	NA	-11	True	AATAAA	-15	NA	22003730	21756547	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_21756756_21759169_21759619_21766260_21766310_21805979_21806100_21882281_21882440_21904521_21904613_21918778_21918873_21919831_21919930_21920797_21920964_21928505_21928553_21929039_21929142_22003212
H1_mix_00009947	chr10	-	7106	25	FSM	ENSG00000107863.20	ENST00000376410.7	7099	25	0	-7	0	-1	multi-exon	FALSE	canonical	3	28	junction_24	16.4568037263889	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGGCTTGAAACTTATTC	-18	True	NA	-10	True	AATAAA	-20	NA	24723233	24583609	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_24586107_24589270_24589303_24591224_24591331_24591641_24591684_24591886_24592013_24594949_24595040_24595116_24595191_24595716_24595796_24595887_24596044_24596739_24596883_24597446_24597584_24597944_24598010_24600645_24600931_24601977_24602104_24604311_24604349_24607498_24607602_24607744_24607904_24619472_24621370_24629995_24630051_24633401_24633481_24635010_24635104_24666984_24667010_24670217_24670398_24721836_24722280_24723156
H1_mix_00009949	chr10	-	1267	8	NIC	ENSG00000107863.20	novel	801	7	NA	NA	24	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	32.5833311585503	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGCAGTATTGTTAGTAG	6	True	NA	NA	False	AATAAA	-20	NA	24723209	24629523	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_24629863_24629995_24630051_24633401_24633481_24635010_24635104_24666984_24667010_24670217_24670398_24721836_24722280_24723156
H1_mix_00009952	chr10	-	741	4	FSM	ENSG00000099256.19	ENST00000376376.3	741	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	32.4276973520408	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTAGTCTTCTAGTTCT	-1	True	NA	NA	False	GATAAA	-21	NA	24952592	24908300	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_24908686_24937183_24937368_24942329_24942437_24952527
H1_mix_00009955	chr10	-	3704	3	ISM	ENSG00000136754.18	ENST00000376142.6	3576	12	102841	1075	65196	-773	3prime_fragment	FALSE	canonical	3	242	junction_2	71.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATCTTTTGAAACTAA	2792	False	NA	NA	False	NA	NA	NA	26758094	26747667	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_-_26748746_26751597_26751784_26755654
H1_mix_00009958	chr10	-	2499	9	FSM	ENSG00000136754.18	ENST00000376166.5	3441	9	-53	995	-9	-693	multi-exon	FALSE	canonical	3	76	junction_2	105.91734690314	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCCTTCAGTTGTACAGT	42	False	NA	NA	False	NA	NA	NA	26861039	26747587	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_26748746_26751597_26751784_26759061_26759236_26765217_26765319_26768851_26768993_26770244_26770346_26777064_26777242_26823137_26823306_26860746
H1_mix_00009961	chr10	-	5564	34	FSM	ENSG00000107890.17	ENST00000436985.7	5564	34	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_17	8.28332100037328	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTAATTGATGGCTTATT	0	True	NA	NA	False	TTTAAA	-37	NA	27100485	27005314	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_27005724_27006916_27006963_27012881_27013111_27014493_27014712_27017501_27017793_27022557_27022688_27024446_27024560_27028851_27028946_27029285_27029357_27033224_27033378_27034795_27035753_27037185_27037324_27037870_27038055_27039964_27040179_27043425_27043568_27044156_27044191_27046352_27046521_27048800_27048980_27053319_27053391_27060344_27060418_27060511_27060541_27061143_27061243_27063987_27064082_27066486_27066549_27067156_27067287_27077337_27077541_27077632_27077694_27079088_27079162_27082802_27082834_27086538_27086610_27092405_27092513_27093348_27093523_27093684_27093800_27100084
H1_mix_00009964	chr10	-	5093	18	FSM	ENSG00000136758.20	ENST00000613434.4	4127	18	-896	-70	-50	69	multi-exon	FALSE	canonical	3	79	junction_15	255.267781238464	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTCATGCAAGTGTTTGG	668	False	NA	NA	False	NA	NA	NA	27155316	27110041	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_27112121_27114520_27114608_27116059_27116134_27116218_27116346_27117575_27117728_27119293_27119450_27120434_27120548_27121385_27121449_27122840_27122974_27123546_27123700_27126695_27126787_27131858_27131942_27134038_27134123_27134830_27134982_27136275_27136386_27145427_27145591_27148905_27149041_27154177
H1_mix_00009965	chr10	-	986	8	FSM	ENSG00000136758.20	ENST00000396296.7	986	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	395.072661877869	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGTAAAAGCTTTTTTT	7	True	NA	NA	False	NA	NA	NA	27154371	27134043	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_27134123_27134830_27134982_27136275_27136386_27142386_27142486_27145427_27145591_27148905_27149041_27153226_27153282_27154177
H1_mix_00009968	chr10	-	3959	13	FSM	ENSG00000107897.20	ENST00000375888.5	1747	13	-73	-2139	0	0	multi-exon	TRUE	canonical	3	17	junction_9	51.4578441272293	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTTTTATTACTTGTT	2403	False	NA	0	True	AATAAA	-18	NA	27240631	27195213	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_27197443_27204439_27204550_27205197_27205249_27208245_27208446_27210813_27211082_27215534_27215642_27217979_27218184_27219722_27219858_27223206_27223240_27223337_27223453_27231747_27231821_27235091_27235213_27240318
H1_mix_00009970	chr10	-	3858	13	NIC	ENSG00000107897.20	novel	3903	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_12	37.5598596317339	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTTTTATTACTTGTT	2272	False	NA	0	True	AATAAA	-18	NA	27240762	27195213	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_27197443_27204439_27204550_27205197_27205249_27208245_27208446_27210813_27211082_27215534_27215642_27217979_27218184_27219722_27219858_27223337_27223453_27231747_27231821_27235091_27235213_27240318_27240475_27240673
H1_mix_00009980	chr10	-	6632	1	FSM	ENSG00000230445.4	ENST00000448648.2	5444	1	613	-1801	613	1801	mono-exon	FALSE	NA	NA	NA	NA	NA	429	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAAAAGACGACTTTCA	615	False	NA	NA	False	NA	NA	NA	27251180	27244548	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_27244500_27251200
H1_mix_00009984	chr10	-	5138	17	FSM	ENSG00000150054.19	ENST00000683449.1	5138	17	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_6	9.78339633000728	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCTTTCATCGAGGCTG	0	True	NA	0	True	ATTAAA	-23	NA	28303064	28050992	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_28054245_28056479_28056624_28058494_28058604_28059649_28059744_28069771_28069853_28089670_28089842_28119650_28119716_28120193_28120391_28120593_28120669_28124030_28124117_28125009_28125092_28131559_28131692_28147482_28147564_28149981_28150060_28202152_28202272_28238567_28238736_28302860
H1_mix_00009986	chr10	-	2138	2	NIC	ENSG00000254635.6	novel	2323	3	NA	NA	124	0	combination_of_known_splicesites	FALSE	canonical	3	40	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGTTCCAACTTTTCA	21	True	NA	NA	False	AATAAA	-23	NA	28532619	28522651	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_28524612_28532441
H1_mix_00009987	chr10	-	3320	3	FSM	ENSG00000254635.6	ENST00000528337.2	2649	3	-671	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	54	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAAATAAATGTTCACTT	NA	False	NA	NA	False	AATACA	-16	NA	28533066	28522684	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_28524612_28525947_28526009_28531734
H1_mix_00009988	chr10	-	2157	3	FSM	ENSG00000254635.6	ENST00000664327.1	2157	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	52	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTGAGGTTGGGAGTTC	NA	False	NA	NA	False	NA	NA	NA	28533066	28523220	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_28524612_28525867_28526009_28532441
H1_mix_00009998	chr10	-	5616	9	FSM	ENSG00000107951.15	ENST00000263063.9	5560	9	-56	0	-56	0	multi-exon	FALSE	canonical	3	641	junction_6	56.808752626686	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTCTGCTGTCATTTC	NA	False	NA	-15	True	AATAAA	-18	NA	30349334	30309800	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_30313972_30315962_30316037_30316117_30316211_30322390_30322618_30326423_30326636_30336802_30337028_30340225_30340451_30341467_30341641_30349118
H1_mix_00010003	chr10	-	2503	1	FSM	ENSG00000237036.6	ENST00000607166.1	2503	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGTGTGACGGTTGCTT	15	True	NA	1	True	AATAAA	-19	NA	31319030	31316527	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_31316500_31319000
H1_mix_00010004	chr10	-	2172	2	FSM	ENSG00000237036.6	ENST00000659795.2	2210	2	38	0	8	0	multi-exon	FALSE	canonical	2	9	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGTGTGACGGTTGCTT	-9	True	NA	1	True	AATAAA	-19	NA	31319054	31316527	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_31318541_31318895
H1_mix_00010006	chr10	-	4914	18	FSM	ENSG00000165322.18	ENST00000375250.9	4914	18	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_11	33.7880632471451	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTAGTAAGTCTTCCTT	7	True	NA	-9	True	AATAAA	-18	NA	31928814	31805436	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_31807833_31808648_31808752_31808993_31809129_31809229_31809308_31810648_31810748_31812706_31812824_31814258_31814362_31817787_31817887_31820386_31820489_31826303_31826386_31831738_31831801_31843460_31843587_31852516_31852598_31854065_31854207_31861394_31861659_31908171_31908927_31910524_31910564_31928682
H1_mix_00010008	chr10	-	5032	19	FSM	ENSG00000165322.18	ENST00000396144.8	5084	19	19	33	19	0	multi-exon	FALSE	canonical	3	21	junction_11	39.8388730070158	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTAGTAAGTCTTCCTT	11	False	NA	-9	True	AATAAA	-18	NA	31928857	31805436	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_31807833_31808648_31808752_31808993_31809129_31809229_31809308_31810648_31810748_31812706_31812824_31814258_31814362_31817787_31817887_31820386_31820489_31826303_31826386_31831738_31831801_31839636_31839712_31843460_31843587_31852516_31852598_31854065_31854207_31861394_31861659_31908171_31908927_31910524_31910564_31928682
H1_mix_00010009	chr10	-	4769	17	NIC	ENSG00000165322.18	novel	4914	18	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_11	31.6735669565333	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTAGTAAGTCTTCCTT	11	True	NA	-9	True	AATAAA	-18	NA	31928810	31805436	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_31807833_31808648_31808752_31808993_31809129_31809229_31809308_31810648_31810748_31812706_31812824_31814258_31814362_31817787_31817887_31820386_31820489_31826303_31826386_31831738_31831801_31843460_31843587_31852516_31852598_31861394_31861659_31908171_31908927_31910524_31910564_31928682
H1_mix_00010010	chr10	-	4845	18	NIC	ENSG00000165322.18	novel	4958	19	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_11	38.8861349055068	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTAGTAAGTCTTCCTT	10	True	NA	-9	True	AATAAA	-18	NA	31928811	31805436	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_31807833_31808648_31808752_31808993_31809129_31809229_31809308_31810648_31810748_31812706_31812824_31814258_31814362_31817787_31817887_31820386_31820489_31826303_31826386_31831738_31831801_31839636_31839712_31843460_31843587_31852516_31852598_31861394_31861659_31908171_31908927_31910524_31910564_31928682
H1_mix_00010022	chr10	-	4289	16	FSM	ENSG00000150093.20	ENST00000437302.6	4274	16	0	-15	0	0	multi-exon	FALSE	canonical	1	1	junction_15	416.735962237749	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGTTGGTGGGTAGTT	593	False	NA	-2	True	ATTAAA	-18	NA	32957865	32900317	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_32901636_32908367_32908535_32910222_32910456_32911447_32911671_32911885_32912125_32919884_32920085_32920244_32920386_32922256_32922347_32922639_32922736_32923584_32923741_32925870_32926110_32928093_32928265_32929821_32930045_32932514_32932601_32935491_32935559_32957225
H1_mix_00010023	chr10	-	3785	16	FSM	ENSG00000150093.20	ENST00000396033.6	3784	16	0	-1	0	0	multi-exon	FALSE	canonical	3	85	junction_15	396.577300857671	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGTTGGTGGGTAGTT	0	True	NA	-2	True	ATTAAA	-18	NA	32957894	32900317	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_32901636_32908367_32908535_32910222_32910456_32911447_32911671_32911885_32912125_32919884_32920085_32920244_32920386_32922256_32922347_32922639_32922736_32923584_32923741_32925870_32926110_32928093_32928265_32929821_32930045_32932514_32932601_32935491_32935559_32957758
H1_mix_00010024	chr10	-	3735	16	FSM	ENSG00000150093.20	ENST00000302278.8	3735	16	0	0	0	0	multi-exon	FALSE	canonical	3	1359	junction_10	114.443503771754	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGTTGGTGGGTAGTT	7	True	NA	-2	True	ATTAAA	-18	NA	32958230	32900317	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_32901636_32908367_32908535_32910222_32910456_32911447_32911671_32911885_32912125_32919884_32920085_32920244_32920386_32922256_32922347_32922639_32922736_32923584_32923741_32925870_32926110_32928093_32928265_32929821_32930045_32932514_32932601_32935491_32935559_32958144
H1_mix_00010025	chr10	-	3970	17	FSM	ENSG00000150093.20	ENST00000676964.1	3955	17	0	-15	0	0	multi-exon	FALSE	canonical	3	33	junction_14	527.93627915095	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGTTGGTGGGTAGTT	5	True	NA	-2	True	ATTAAA	-18	NA	32958232	32900317	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_32901636_32908367_32908535_32910222_32910456_32911447_32911671_32911885_32912125_32919884_32920085_32920244_32920386_32922256_32922347_32922639_32922736_32923584_32923741_32925870_32926110_32928093_32928265_32929821_32930045_32932514_32932601_32933350_32933584_32935491_32935559_32958144
H1_mix_00010033	chr10	-	5843	24	FSM	ENSG00000148498.16	ENST00000350537.9	5842	24	0	-1	0	0	multi-exon	FALSE	canonical	3	54	junction_8	73.4863900828596	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTGTCTCTGGTGTTC	2	True	NA	-1	True	AATAAA	-21	NA	34815296	34109559	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_34111563_34119612_34119741_34131462_34131584_34269656_34269900_34284134_34284246_34317106_34317339_34331116_34331345_34336198_34336244_34337364_34337427_34341626_34341817_34347964_34348116_34359146_34359318_34360070_34360260_34374873_34375003_34377966_34378107_34382539_34382923_34384128_34384255_34399329_34399414_34401825_34401918_34450316_34450449_34470084_34470264_34516978_34517160_34696317_34696420_34814875
H1_mix_00010034	chr10	-	5801	23	FSM	ENSG00000148498.16	ENST00000374790.8	5800	23	0	-1	0	0	multi-exon	FALSE	canonical	3	108	junction_19	68.3850909274604	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTGTCTCTGGTGTTC	2	True	NA	-1	True	AATAAA	-21	NA	34815296	34109559	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_34111563_34119612_34119741_34131462_34131584_34269656_34269900_34284134_34284246_34317106_34317339_34331116_34331345_34336198_34336244_34337274_34337427_34341626_34341817_34347964_34348116_34359146_34359318_34360070_34360260_34374873_34375003_34377966_34378107_34382539_34382923_34384128_34384255_34399329_34399414_34401825_34401918_34470084_34470264_34516978_34517160_34696317_34696420_34814875
H1_mix_00010035	chr10	-	5870	24	FSM	ENSG00000148498.16	ENST00000346874.9	5869	24	0	-1	0	0	multi-exon	FALSE	canonical	3	30	junction_4	76.7213306120825	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTGTCTCTGGTGTTC	2	True	NA	-1	True	AATAAA	-21	NA	34815296	34109559	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_34111563_34119612_34119741_34131462_34131584_34269656_34269900_34317106_34317339_34331116_34331345_34336198_34336244_34337274_34337427_34341626_34341817_34347955_34348116_34359146_34359318_34360070_34360260_34372497_34372537_34374873_34375003_34377966_34378107_34382539_34382923_34384128_34384255_34399329_34399414_34401825_34401918_34450316_34450449_34470084_34470264_34516978_34517160_34696317_34696420_34814875
H1_mix_00010037	chr10	-	3395	21	FSM	ENSG00000148498.16	ENST00000374773.6	3395	21	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	69.8221132593393	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTAGTGGCTGTTGAC	2	True	NA	NA	False	AATAAA	-14	NA	34815296	34312263	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_34312383_34317106_34317339_34331116_34331345_34336198_34336244_34337364_34337427_34341626_34341817_34347964_34348116_34359146_34359318_34360070_34360260_34372497_34372537_34374873_34375003_34377966_34378107_34382539_34382923_34384128_34384255_34399329_34399414_34401825_34401918_34450316_34450449_34470084_34470264_34516978_34517160_34696317_34696420_34814875
H1_mix_00010038	chr10	-	3358	20	FSM	ENSG00000148498.16	ENST00000374776.6	3364	20	0	6	0	-2	multi-exon	FALSE	canonical	3	54	junction_4	69.7148922755113	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTAGTGGCTGTTGACGA	2	True	NA	NA	False	AATAAA	-16	NA	34815296	34312261	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_34312383_34317106_34317339_34331116_34331345_34336198_34336244_34337364_34337427_34341626_34341817_34347964_34348116_34359146_34359318_34360070_34360260_34374873_34375003_34377966_34378107_34382539_34382923_34384128_34384255_34399329_34399414_34401825_34401918_34450316_34450449_34470084_34470264_34516978_34517160_34696317_34696420_34814875
H1_mix_00010039	chr10	-	3516	21	FSM	ENSG00000148498.16	ENST00000340077.9	3518	21	0	2	0	-2	multi-exon	FALSE	canonical	3	137	junction_9	56.5750828545571	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTAGTGGCTGTTGACGA	-27	True	NA	NA	False	AATAAA	-16	NA	34815325	34312261	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_34312383_34317106_34317339_34331116_34331345_34336198_34336244_34337274_34337427_34341626_34341817_34347964_34348116_34359146_34359318_34360070_34360260_34372497_34372537_34374873_34375003_34377966_34378107_34382539_34382923_34384128_34384255_34399329_34399414_34401825_34401918_34450316_34450449_34470084_34470264_34516978_34517160_34696317_34696420_34814875
H1_mix_00010040	chr10	-	3421	20	NIC	ENSG00000148498.16	novel	3518	21	NA	NA	18	-7	combination_of_known_junctions	FALSE	canonical	3	128	junction_9	55.0982501946771	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATGAATTCTTAGTGGC	20	True	NA	NA	False	AATAAA	-7	NA	34815278	34312270	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_34312383_34317106_34317339_34331116_34331345_34336198_34336244_34337274_34337427_34341626_34341817_34347964_34348116_34359146_34359318_34360070_34360260_34374873_34375003_34377966_34378107_34382539_34382923_34384128_34384255_34399329_34399414_34401825_34401918_34450316_34450449_34470084_34470264_34516978_34517160_34696317_34696420_34814875
H1_mix_00010041	chr10	-	3227	20	NIC	ENSG00000148498.16	novel	3395	21	NA	NA	37	-8	combination_of_known_junctions	FALSE	canonical	3	54	junction_4	83.1596268973495	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAATGAATTCTTAGTGG	39	True	NA	NA	False	AATAAA	-6	NA	34815259	34312271	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_34312383_34317106_34317339_34331116_34331345_34336198_34336244_34337364_34337427_34341626_34341817_34347955_34348116_34359146_34359318_34360070_34360260_34372497_34372537_34374873_34375003_34377966_34378107_34382539_34382923_34384128_34384255_34399329_34399414_34401825_34401918_34470084_34470264_34516978_34517160_34696317_34696420_34814875
H1_mix_00010042	chr10	-	3435	20	NIC	ENSG00000148498.16	novel	3518	21	NA	NA	0	-20	combination_of_known_junctions	FALSE	canonical	3	74	junction_6	67.6634166306912	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAAATTTACTTTTAATG	2	True	NA	NA	False	TTTAAA	-5	NA	34815296	34312283	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_34312383_34317106_34317339_34331116_34331345_34336198_34336244_34337274_34337427_34341626_34341817_34347955_34348116_34359146_34359318_34360070_34360260_34374873_34375003_34377966_34378107_34382539_34382923_34384128_34384255_34399329_34399414_34401825_34401918_34450316_34450449_34470084_34470264_34516978_34517160_34696317_34696420_34814875
H1_mix_00010043	chr10	-	3618	19	NIC	ENSG00000148498.16	novel	3518	21	NA	NA	-280	-8	combination_of_known_junctions	FALSE	canonical	3	32	junction_3	87.6859752007901	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAATGAATTCTTAGTGG	NA	False	NA	NA	False	AATAAA	-6	NA	34815605	34312271	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_34312383_34317106_34317339_34331116_34331345_34337274_34337427_34341626_34341817_34347955_34348116_34359146_34359318_34360070_34360260_34372497_34372537_34374873_34375003_34377966_34378107_34382539_34382923_34384128_34384255_34399329_34399414_34401825_34401918_34470084_34470264_34516978_34517160_34696317_34696420_34814875
H1_mix_00010044	chr10	-	5753	14	NIC	ENSG00000148498.16	novel	799	5	NA	NA	0	3124	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	87.106613584604	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCTGAACAGGTTTCTA	-27	True	NA	NA	False	NA	NA	NA	34815325	34343073	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_34346450_34347964_34348116_34359146_34359318_34360070_34360260_34374873_34375003_34377966_34378107_34382539_34382923_34384128_34384255_34399329_34399414_34401825_34401918_34470084_34470264_34516978_34517160_34696317_34696420_34814875
H1_mix_00010048	chr10	-	4225	21	FSM	ENSG00000108094.17	ENST00000374751.7	4233	21	8	0	8	0	multi-exon	FALSE	canonical	3	229	junction_20	55.8344875502588	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTTTTTTCTTAAATAT	NA	False	NA	-14	True	GATAAA	-16	NA	35090634	35008550	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_35010443_35011847_35011965_35013698_35013801_35016191_35016395_35025131_35025199_35028809_35028888_35029487_35029641_35031299_35031387_35031490_35031620_35032434_35032495_35033165_35033274_35035171_35035297_35038919_35039083_35044565_35044677_35044771_35044869_35049682_35049766_35054433_35054540_35060873_35060969_35062959_35063063_35071198_35071340_35090429
H1_mix_00010057	chr10	-	4797	6	FSM	ENSG00000198105.16	ENST00000357328.8	4795	6	0	-2	0	0	multi-exon	FALSE	canonical	2	3	junction_5	52.8075752141679	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTGATTAATTCACCCT	4	True	NA	-10	True	AATAAA	-19	NA	37858084	37828762	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_37833117_37837616_37837713_37837984_37838112_37856295_37856338_37856434_37856533_37858004
H1_mix_00010058	chr10	-	4949	5	ISM	ENSG00000198105.16	ENST00000485560.5	1705	7	-56	26033	3	-91	5prime_fragment	FALSE	canonical	3	20	junction_4	51.2079095453036	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATTCATACCTCCCTGTG	8	True	NA	-103	True	ATTAAA	-5	NA	37857607	37828855	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_-_37833117_37837616_37837713_37837984_37838112_37856295_37856338_37857184
H1_mix_00010059	chr10	-	1685	8	NNC	ENSG00000198105.16	novel	1286	7	NA	NA	1	-200	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	42.8933180657999	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTTTCTGTTTGTTCTGC	6	True	NA	-2	True	AATAAA	-24	NA	37857609	37828964	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_37829689_37831231_37831313_37833024_37833117_37837616_37837713_37837984_37838112_37856295_37856338_37856434_37856533_37857184
H1_mix_00010064	chr10	-	1695	6	FSM	ENSG00000234420.8	ENST00000435805.7	2617	6	3	919	-1	34	multi-exon	FALSE	canonical	1	1	junction_5	6.22896460095897	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACATCCAAGAGAGAACCAC	4	True	NA	NA	False	NA	NA	NA	42552822	42520786	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_42521128_42523181_42523306_42523611_42523739_42550556_42550616_42551576_42552597_42552798
H1_mix_00010066	chr10	-	707	4	FSM	ENSG00000196693.15	ENST00000465206.5	707	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	41.5772373621272	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGTCTACATAATTTTAA	6248	False	NA	NA	False	NA	NA	NA	42632367	42582690	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_42583124_42594594_42594700_42631928_42632025_42632294
H1_mix_00010067	chr10	-	5986	5	FSM	ENSG00000196693.15	ENST00000359467.8	5982	5	0	-4	0	2	multi-exon	FALSE	canonical	3	34	junction_1	31.6267292017369	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAACATCTTGTTTCTGT	-5	True	NA	-7	True	AATAAA	-24	NA	42638570	42589104	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_42594700_42631928_42632025_42632294_42632440_42636919_42636973_42638473
H1_mix_00010068	chr10	-	6001	6	NIC	ENSG00000196693.15	novel	5982	5	NA	NA	13	2	combination_of_known_junctions	FALSE	canonical	3	54	junction_1	22.0236236800396	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAACATCTTGTTTCTGT	16	True	NA	-7	True	AATAAA	-24	NA	42638508	42589104	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_42594700_42614281_42614359_42631928_42632025_42632294_42632440_42636919_42636973_42638473
H1_mix_00010069	chr10	-	5822	4	NIC	ENSG00000196693.15	novel	5982	5	NA	NA	1	-12	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	35.8143360495021	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACCAACCAACCCTGAGG	-2	True	NA	-23	True	AATAAA	-8	NA	42638567	42589120	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_42594700_42631928_42632025_42636919_42636973_42638473
H1_mix_00010070	chr10	-	5958	5	ISM	ENSG00000196693.15	ENST00000486187.5	1941	6	-73	7527	-56	-12	5prime_fragment	FALSE	canonical	3	20	junction_3	29.8789223366573	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACCAACCAACCCTGAGG	-11	True	NA	-23	True	AATAAA	-8	NA	42638626	42589120	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_-_42594700_42614281_42614359_42631928_42632025_42636919_42636973_42638473
H1_mix_00010073	chr10	-	3165	12	NIC	ENSG00000198915.12	novel	3264	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_11	12.1137856037199	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTGCCTGCTGTGTGTG	21	True	NA	-7	True	AATAAA	-18	NA	43203819	43194534	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_43196269_43196475_43196549_43196975_43197100_43198003_43198196_43198932_43199013_43199091_43199195_43199675_43199769_43200181_43200257_43200666_43200889_43201807_43201946_43203297_43203421_43203611
H1_mix_00010075	chr10	-	3379	13	FSM	ENSG00000198915.12	ENST00000395810.6	3382	13	3	0	3	0	multi-exon	FALSE	canonical	0	0	junction_12	19.9309572162392	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTGCCTGCTGTGTGTG	20	True	NA	-7	True	AATAAA	-18	NA	43267062	43194534	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_43196269_43196475_43196549_43196975_43197100_43198003_43198196_43198932_43199013_43199091_43199195_43199675_43199769_43200181_43200257_43200666_43200889_43201807_43201946_43203297_43203421_43205918_43206123_43266844
H1_mix_00010076	chr10	-	3445	4	FSM	ENSG00000169813.17	ENST00000356053.7	2670	4	-342	-433	-38	433	multi-exon	FALSE	canonical	3	53	junction_3	1043.55961337466	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGGGCTTCAGAGGCTC	NA	False	NA	NA	False	ATTAAA	-36	NA	43409224	43385183	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_43387937_43394629_43394689_43396455_43396591_43408726
H1_mix_00010077	chr10	-	2755	3	FSM	ENSG00000169813.17	ENST00000443950.6	2755	3	0	0	0	0	multi-exon	FALSE	canonical	3	2223	junction_2	42.5	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGTCACGCTCCTGA	436	False	NA	-1	True	TATAAA	-19	NA	43396831	43385616	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_43387937_43394629_43394689_43396455
H1_mix_00010078	chr10	-	2676	4	FSM	ENSG00000169813.17	ENST00000544000.5	2676	4	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_3	984.19747341002	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGTCACGCTCCTGA	NA	False	NA	-1	True	TATAAA	-19	NA	43397346	43385616	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_43387937_43394629_43394689_43396455_43396591_43397184
H1_mix_00010079	chr10	-	3050	4	FSM	ENSG00000169813.17	ENST00000357065.8	2617	4	0	-433	0	433	multi-exon	FALSE	canonical	3	248	junction_3	951.691476617641	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGGGCTTCAGAGGCTC	1357	False	NA	NA	False	ATTAAA	-36	NA	43407819	43385183	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_43387937_43394629_43394689_43396455_43396591_43407716
H1_mix_00010080	chr10	-	2570	4	FSM	ENSG00000169813.17	ENST00000682386.1	2569	4	0	-1	0	0	multi-exon	FALSE	canonical	3	755	junction_3	712.90158273542	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGTCACGCTCCTGA	-10	True	NA	-1	True	TATAAA	-19	NA	43409186	43385616	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_43387937_43394629_43394689_43396455_43396591_43409130
H1_mix_00010081	chr10	-	2189	4	FSM	ENSG00000169813.17	ENST00000337970.7	2186	4	0	-3	0	3	multi-exon	FALSE	canonical	3	116	junction_3	1013.87803342743	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCACAGATTACTCAGCA	10	True	NA	-41	True	AATAAA	-17	NA	43409166	43386018	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_43387937_43394629_43394689_43396455_43396591_43409089
H1_mix_00010083	chr10	-	2039	3	FSM	ENSG00000196793.14	ENST00000426961.1	2027	3	6	-18	4	15	multi-exon	FALSE	canonical	2	3	junction_2	3.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATACTTCTTTCCAGT	-18	True	NA	14	True	NA	NA	NA	43574612	43556328	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_43558172_43567898_43568022_43574539
H1_mix_00010084	chr10	-	1916	2	FSM	ENSG00000196793.14	ENST00000535642.5	1904	2	6	-18	4	15	multi-exon	FALSE	canonical	3	21	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATACTTCTTTCCAGT	-18	True	NA	14	True	NA	NA	NA	43574612	43556328	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_43558172_43574539
H1_mix_00010087	chr10	-	1161	3	FSM	ENSG00000169740.14	ENST00000374433.7	1159	3	0	-2	0	0	multi-exon	FALSE	canonical	3	57	junction_2	35	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATGTTTTATAATTTCT	-14	True	NA	-4	True	AATAAA	-23	NA	43648881	43643859	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_43644802_43646063_43646203_43648801
H1_mix_00010088	chr10	-	1147	3	NNC	ENSG00000169740.14	novel	1159	3	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	20	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTATGTTTTATAATTT	2	True	NA	-6	True	AATAAA	-21	NA	43648865	43643861	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_43644802_43646059_43646203_43648801
H1_mix_00010091	chr10	-	3541	4	FSM	ENSG00000107562.17	ENST00000374429.6	3532	4	0	-9	0	9	multi-exon	FALSE	canonical	3	21	junction_1	57.0399470157148	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTGAAATTAGTGTTACT	4	True	NA	0	True	AATAAA	-28	NA	44385092	44370155	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_44373344_44378636_44378724_44380762_44380881_44384944
H1_mix_00010092	chr10	-	1857	3	FSM	ENSG00000107562.17	ENST00000343575.11	1928	3	5	66	0	31	multi-exon	FALSE	canonical	3	142	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACGTCCTACTGTATGTG	4	True	NA	-70	True	AATAAA	-21	NA	44385092	44377132	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_44378724_44380762_44380881_44384944
H1_mix_00010093	chr10	-	1052	4	FSM	ENSG00000107562.17	ENST00000395794.2	1052	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	62.2253967444162	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAGCAATAAAATGCTAATT	47	False	NA	-101	True	ACTAAA	-28	NA	44385049	44377163	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_44377906_44378636_44378724_44380762_44380881_44384944
H1_mix_00010097	chr10	-	468	1	FSM	ENSG00000228462.1	ENST00000455650.1	396	1	-15	-57	-15	57	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCTGGATGTGACCAAGC	NA	False	NA	0	True	AATAAA	-29	NA	45073556	45073088	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_45073100_45073600
H1_mix_00010098	chr10	-	5323	8	NIC	ENSG00000165406.16	novel	5272	7	NA	NA	50	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_7	23.1199180847359	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGCCATGAGAGTGTTT	-34	True	NA	0	True	AATAAA	-19	NA	45594856	45454584	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_45458544_45459119_45459268_45461230_45461412_45464238_45464328_45489366_45489418_45533109_45533290_45553111_45553205_45594234
H1_mix_00010102	chr10	-	5887	10	NIC	ENSG00000172671.20	novel	3760	10	NA	NA	-8	2133	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	12.7714960404453	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATTTTAAGTTTTCTTT	-35	True	NA	NA	False	AATAAA	-27	NA	45672788	45613366	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_45616572_45618139_45618261_45624582_45624638_45625950_45627106_45639815_45639964_45648293_45648535_45651965_45652034_45652983_45653060_45663541_45663843_45672271
H1_mix_00010110	chr10	-	3892	13	NIC	ENSG00000239883.9	novel	1758	12	NA	NA	5	1166	combination_of_known_splicesites	FALSE	canonical	2	7	junction_12	50.9102560066895	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAAAGATAAATCTCATGT	18	False	NA	NA	False	AATAAA	-7	NA	45972403	45861442	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_45863115_45888164_45888313_45892431_45892508_45896183_45896245_45900346_45900427_45910548_45910707_45916078_45916172_45939360_45939448_45946836_45946912_45953122_45953207_45962810_45962995_45963884_45964872_45972216
H1_mix_00010111	chr10	-	2147	8	NIC	ENSG00000239883.9	novel	2286	12	NA	NA	-7	23	combination_of_known_splicesites	FALSE	canonical	2	7	junction_7	55.0784227539354	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATTCACTAGTTTATTT	-1	True	NA	NA	False	AATAAA	-24	NA	45972369	45900013	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_45900427_45910548_45910707_45916078_45916172_45946836_45946912_45953122_45953207_45962810_45962995_45963884_45964872_45972216
H1_mix_00010113	chr10	-	4284	10	FSM	ENSG00000266412.6	ENST00000585132.5	3489	10	0	-795	0	795	multi-exon	FALSE	canonical	3	127	junction_9	161.469715847283	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAGTTAATATGTATGG	8	True	NA	NA	False	NA	NA	NA	46023455	46004292	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_46006598_46009410_46009552_46010222_46011207_46012882_46013027_46013549_46013640_46014443_46014553_46014853_46014943_46015125_46015267_46016539_46016695_46023329
H1_mix_00010114	chr10	-	3461	10	FSM	ENSG00000266412.6	ENST00000581486.6	3461	10	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_9	42.8407905311437	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGCGTGTTATTTTTA	-14	True	NA	-1	True	ATTAAA	-16	NA	46030623	46005087	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_46006598_46009410_46009552_46010222_46011207_46012882_46013027_46013549_46013640_46014443_46014553_46014853_46014943_46015125_46015267_46016539_46016695_46030525
H1_mix_00010129	chr10	-	379	2	ISM	ENSG00000270025.2	ENST00000602440.2	1052	7	0	8460	0	-8460	5prime_fragment	FALSE	canonical	3	56	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGGAGATGGTGCCACAG	NA	False	NA	NA	False	NA	NA	NA	48060016	48058741	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_-_48058931_48059826
H1_mix_00010135	chr10	-	3447	6	FSM	ENSG00000225830.16	ENST00000447839.7	3495	6	48	0	9	0	multi-exon	FALSE	canonical	3	14	junction_1	8.25590697622012	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTCCTTGAATTTTT	-25	True	NA	NA	False	AATAAA	-19	NA	49539073	49515197	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_49517122_49524032_49524778_49528416_49528526_49530719_49530841_49532542_49532979_49538961
H1_mix_00010136	chr10	-	3234	5	FSM	ENSG00000225830.16	ENST00000680233.1	3234	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	4.09267638593623	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATTAGAACTGCCAGTCT	8	True	NA	NA	False	AATAAA	-19	NA	49539040	49522288	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_49524778_49528416_49528526_49530719_49530841_49532542_49532979_49538961
H1_mix_00010142	chr10	-	4275	18	FSM	ENSG00000227345.9	ENST00000616448.2	4294	18	19	0	-10	0	multi-exon	FALSE	canonical	0	0	junction_3	96.3255724974164	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGTTTAGGCATTATTTG	NA	False	NA	-16	True	AATAAA	-21	NA	49942008	49818278	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_49819495_49820164_49820294_49832802_49832909_49841949_49842059_49843553_49843633_49857305_49857454_49861587_49861664_49865320_49865382_49869475_49869556_49879672_49879831_49885202_49885296_49915916_49915992_49922335_49922420_49922546_49922670_49932099_49932284_49933176_49934164_49935075_49935143_49941508
H1_mix_00010143	chr10	-	4186	17	FSM	ENSG00000227345.9	ENST00000614063.4	3473	17	0	-713	0	0	multi-exon	FALSE	canonical	0	0	junction_3	109.754769258561	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGTTTAGGCATTATTTG	NA	False	NA	-16	True	AATAAA	-21	NA	49941986	49818278	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_49819495_49820164_49820294_49832802_49832909_49841949_49842059_49843553_49843633_49857305_49857454_49861587_49861664_49865320_49865382_49869475_49869556_49879672_49879831_49885202_49885296_49915916_49915992_49922335_49922420_49922546_49922670_49932099_49932284_49933176_49934164_49941508
H1_mix_00010152	chr10	-	3750	2	NIC	ENSG00000289527.1	novel	1022	3	NA	NA	-9	3	intron_retention	FALSE	canonical	3	25	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGTGGTCTGTTCACA	11	False	NA	2	True	AATAAA	-25	NA	52039205	52033789	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_52037299_52038964
H1_mix_00010153	chr10	-	3505	2	NIC	ENSG00000289527.1	novel	780	3	NA	NA	-10	3	intron_retention	FALSE	canonical	3	44	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGTGGTCTGTTCACA	10	False	NA	2	True	AATAAA	-25	NA	52039206	52033789	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_52037053_52038964
H1_mix_00010154	chr10	-	3689	2	NIC	ENSG00000289527.1	novel	962	3	NA	NA	9	3	intron_retention	FALSE	canonical	3	95	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGTGGTCTGTTCACA	8	False	NA	2	True	AATAAA	-25	NA	52039208	52033789	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_52037235_52038964
H1_mix_00010155	chr10	-	4304	2	NNC	ENSG00000289527.1	novel	1022	3	NA	NA	8	3	intron_retention	FALSE	canonical	3	110	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGTGGTCTGTTCACA	7	False	NA	2	True	AATAAA	-25	NA	52039209	52033789	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_52037849_52038964
H1_mix_00010156	chr10	-	661	2	FSM	ENSG00000289527.1	ENST00000688489.1	678	2	13	4	-8	0	multi-exon	FALSE	canonical	3	37	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	12	False	NA	-5	True	AATAAA	-18	NA	52039204	52033796	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_52034218_52038964
H1_mix_00010157	chr10	-	664	2	FSM	ENSG00000289527.1	ENST00000689388.1	676	2	12	0	-10	0	multi-exon	FALSE	canonical	3	28	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTGTTC	10	False	NA	-1	True	AATAAA	-22	NA	52039206	52033792	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_52034215_52038964
H1_mix_00010158	chr10	-	1086	3	NNC	ENSG00000289527.1	novel	962	3	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	27.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTGTTTGGTGGTCTGT	10	False	NA	-3	True	AATAAA	-20	NA	52039206	52033794	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_52034355_52036950_52037235_52038964
H1_mix_00010159	chr10	-	1560	3	NNC	ENSG00000289527.1	novel	1022	3	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	41	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	11	False	NA	-5	True	AATAAA	-18	NA	52039205	52033796	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_52034218_52036950_52037849_52038964
H1_mix_00010163	chr10	-	2172	7	FSM	ENSG00000122952.17	ENST00000494312.5	1961	7	0	-211	0	0	multi-exon	TRUE	canonical	3	618	junction_3	106.047814163654	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGATGTCATCTTTTTTA	-3	True	NA	18	True	AATAAA	-42	NA	56361259	56357226	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_56358186_56358376_56358460_56358555_56358725_56358804_56358948_56359475_56359533_56359686_56360384_56361195
H1_mix_00010164	chr10	-	2062	8	FSM	ENSG00000122952.17	ENST00000395405.5	1851	8	0	-211	0	0	multi-exon	FALSE	canonical	3	618	junction_2	100.82658379614	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGATGTCATCTTTTTTA	-17	True	NA	18	True	AATAAA	-42	NA	56361273	56357226	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_56358460_56358555_56358725_56358804_56358948_56359475_56359533_56359686_56359854_56360017_56360142_56360292_56360384_56361195
H1_mix_00010166	chr10	-	807	9	FSM	ENSG00000122952.17	ENST00000361148.6	807	9	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_3	225.701649030307	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGAACTCCTGAGTTCAG	-10	True	NA	-87	True	NA	NA	NA	56361266	56358142	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_56358186_56358376_56358460_56358555_56358688_56358908_56358948_56359475_56359533_56359686_56359854_56360017_56360142_56360292_56360384_56361195
H1_mix_00010168	chr10	-	6093	6	FSM	ENSG00000151151.6	ENST00000373935.4	6093	6	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	8.49470423263812	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTCATTAATTGTAAC	19	True	NA	-19	True	ATTAAA	-17	NA	58267894	58191516	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_58196699_58199239_58199322_58216144_58216318_58227042_58227140_58237728_58237815_58267421
H1_mix_00010170	chr10	-	3997	6	FSM	ENSG00000165449.12	ENST00000395348.8	3946	6	0	-51	0	51	multi-exon	FALSE	canonical	3	117	junction_1	9.89949493661167	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCACTTGAATGTAAAACT	21	True	NA	47	True	NA	NA	NA	59709850	59650712	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_59652951_59653674_59654590_59664226_59664323_59672769_59672914_59684095_59684328_59709478
H1_mix_00010174	chr10	-	7202	44	FSM	ENSG00000151150.22	ENST00000373827.6	7202	44	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_20	26.4117252752884	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCTCTACAGTCTCCT	10	True	NA	-6	True	AATAAA	-22	NA	60733490	60028400	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_60029827_60042671_60042760_60055657_60056037_60059339_60059431_60059697_60060007_60063110_60063255_60064156_60064289_60067934_60068010_60080536_60080619_60082614_60082738_60083491_60083618_60084601_60084831_60085156_60085254_60086676_60086885_60088146_60088359_60105904_60106060_60108829_60109055_60114224_60114332_60134270_60134374_60138963_60139088_60166590_60166654_60166823_60166897_60172307_60172404_60172899_60172999_60173087_60173187_60181328_60181428_60186714_60186913_60196144_60196244_60196526_60196626_60198339_60198538_60200128_60200228_60203001_60203101_60205791_60205891_60208035_60208234_60213411_60213511_60234687_60234787_60261858_60261958_60263834_60264021_60270130_60270230_60278773_60278873_60279049_60279149_60279537_60279640_60615185_60615225_60733262
H1_mix_00010175	chr10	-	4761	21	NIC	ENSG00000151150.22	novel	3811	21	NA	NA	-169	-4	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	24.8142600131457	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATCTGTGCTCTACAGTC	-13	True	NA	-10	True	AATAAA	-18	NA	60140684	60028404	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_60029827_60042671_60042757_60055657_60056037_60059339_60059431_60059697_60060007_60063110_60063255_60064156_60064289_60067934_60068010_60080536_60080619_60082614_60082738_60083491_60083618_60084601_60084831_60085156_60085254_60086676_60086885_60088146_60088359_60105904_60106060_60108829_60109055_60114224_60114332_60134270_60134374_60138963_60139088_60140351
H1_mix_00010184	chr10	-	6878	12	FSM	ENSG00000182010.11	ENST00000373789.8	6886	12	8	0	8	0	multi-exon	FALSE	canonical	3	77	junction_4	70.7159373949953	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTTGTAGCAATTTTATA	8	False	NA	-2	True	AATAAA	-13	NA	62268836	62193085	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_62198444_62199753_62199862_62204856_62205023_62217117_62217250_62218194_62218302_62223237_62223333_62236065_62236264_62239647_62239766_62241141_62241196_62245998_62246058_62262624_62262822_62268550
H1_mix_00010185	chr10	-	6027	4	ISM	ENSG00000182010.11	ENST00000315289.6	2383	9	19927	10964	19927	-913	internal_fragment	FALSE	canonical	1	3	junction_3	44.5196585791041	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTTTTCTAACTTTTTCT	5467	False	NA	-24	True	ATTAAA	-17	NA	62216336	62193998	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_-_62198444_62199753_62199862_62204856_62205023_62215028
H1_mix_00010186	chr10	-	2083	5	FSM	ENSG00000182010.11	ENST00000395260.3	2076	5	0	-7	0	7	multi-exon	FALSE	canonical	3	180	junction_2	33.4140688932072	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATTCCTGGGATTTTTTC	21	True	NA	-4	True	AATAAA	-19	NA	62268707	62238149	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_62239766_62241141_62241196_62245998_62246058_62262624_62262822_62268550
H1_mix_00010192	chr10	-	8364	25	FSM	ENSG00000171988.20	ENST00000542921.5	8149	25	-215	0	-28	0	multi-exon	FALSE	canonical	3	100	junction_23	69.4165666265786	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGTCATGTCATAATCAG	NA	False	NA	NA	False	NA	NA	NA	63269281	63167589	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_63168135_63168434_63168567_63176296_63176474_63177716_63177857_63183446_63183570_63184607_63184739_63185562_63185654_63186214_63186384_63189167_63189447_63190893_63191109_63192937_63193152_63193344_63193473_63194285_63194376_63197410_63197564_63198512_63198728_63200475_63200678_63206594_63208802_63209062_63209236_63213472_63215152_63215262_63215456_63215552_63215697_63217206_63217332_63219877_63219984_63264650_63264765_63268662
H1_mix_00010196	chr10	-	1215	5	FSM	ENSG00000108176.15	ENST00000225171.7	1221	5	1	5	1	-5	multi-exon	FALSE	canonical	3	10	junction_2	1.11803398874989	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTCATAAATGAATTTATAA	-3	True	NA	NA	False	AATAAA	-14	NA	67838187	67796673	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_67797211_67805582_67805788_67811523_67811664_67823313_67823393_67837933
H1_mix_00010197	chr10	-	1064	3	FSM	ENSG00000108176.15	ENST00000339758.7	1064	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATACAGAAATTACCTCATA	8	True	NA	NA	False	NA	NA	NA	67838096	67810841	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_67811664_67823313_67823393_67837933
H1_mix_00010200	chr10	-	3385	4	FSM	ENSG00000148634.16	ENST00000492996.6	3385	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	59.3520569708133	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGATTACTTGGCTTGC	3	True	NA	-2	True	AATAAA	-18	NA	68075283	68067688	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_68070600_68072882_68073187_68073656_68073687_68075143
H1_mix_00010203	chr10	-	4271	18	FSM	ENSG00000204130.14	ENST00000602465.6	4269	18	0	-2	0	0	multi-exon	FALSE	canonical	3	22	junction_6	5.86054782091621	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGGTGTATGCCCTAAT	-4	True	NA	95	True	AATAAA	-24	NA	68407277	68343405	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_68345912_68346006_68346085_68355352_68355402_68363589_68363685_68363983_68364114_68376852_68376973_68379423_68379522_68381231_68381400_68383797_68383915_68384050_68384153_68386058_68386129_68393137_68393204_68394074_68394137_68394327_68394452_68396779_68396882_68401619_68401738_68404670_68404845_68407185
H1_mix_00010206	chr10	-	6571	9	FSM	ENSG00000122912.15	ENST00000609923.6	6581	9	9	1	9	0	multi-exon	FALSE	canonical	3	14	junction_4	9.5973629190523	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACAGCTTGTGGAAAGTG	-10	True	NA	NA	False	AATAAA	-20	NA	68527514	68477998	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_68483589_68487143_68487213_68488466_68488630_68493131_68493199_68493448_68493571_68503631_68503696_68506584_68506719_68516750_68516844_68527245
H1_mix_00010208	chr10	-	311	5	FSM	ENSG00000122912.15	ENST00000474927.1	311	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	11.3880419739304	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTCTGATGCCTACTATT	NA	False	NA	NA	False	NA	NA	NA	68506605	68493173	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_68493199_68493448_68493571_68496433_68496513_68503631_68503696_68506584
H1_mix_00010213	chr10	-	3397	2	FSM	ENSG00000156521.14	ENST00000335494.5	3397	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTGTCTCTGAGCTC	9	True	NA	-2	True	AATAAA	-14	NA	70146656	70137980	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_70140142_70145420
H1_mix_00010218	chr10	-	3278	7	FSM	ENSG00000079332.15	ENST00000373238.5	3227	7	-51	0	-51	0	multi-exon	FALSE	canonical	3	58	junction_6	357.960736518531	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGCTATTTCCTTTTTTTT	7413	False	NA	NA	False	AATAAA	-14	NA	70163082	70150203	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_70152593_70153837_70153970_70157763_70157868_70161003_70161070_70161618_70161739_70161857_70161932_70162689
H1_mix_00010219	chr10	-	1292	11	FSM	ENSG00000180817.12	ENST00000373232.8	1292	11	0	0	0	0	multi-exon	FALSE	canonical	3	1356	junction_8	99.9847988446244	501	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCTTAGGATATTTTTA	-1	True	NA	-5	True	AATAAA	-16	NA	70233429	70202834	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_70203187_70204872_70204916_70206263_70206334_70209204_70209291_70209557_70209686_70213462_70213590_70214499_70214587_70217811_70217932_70218763_70218818_70230340_70230400_70233263
H1_mix_00010221	chr10	-	3129	5	FSM	ENSG00000172731.15	ENST00000373224.5	3095	5	-36	2	0	0	multi-exon	FALSE	canonical	2	5	junction_4	33.9512518178638	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTGGTTGGTGTTTGA	-2	True	NA	-6	True	AATAAA	-17	NA	70382625	70298974	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_70301509_70323862_70324031_70340552_70340703_70376451_70376597_70382493
H1_mix_00010222	chr10	-	3078	5	FSM	ENSG00000172731.15	ENST00000446961.4	3074	5	1	-5	1	0	multi-exon	FALSE	canonical	3	69	junction_1	10.0249688278817	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTGGTGTTTGATTCAT	-1	True	NA	-1	True	AATAAA	-22	NA	70382624	70298969	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_70301509_70323862_70324031_70340552_70340703_70376451_70376597_70382548
H1_mix_00010223	chr10	-	2954	4	FSM	ENSG00000172731.15	ENST00000395010.5	2959	4	0	5	0	0	multi-exon	FALSE	canonical	3	26	junction_3	24.9131825880731	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTGGTTGGTGTTTGA	NA	False	NA	-6	True	AATAAA	-17	NA	70382650	70298974	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_70301509_70323862_70324031_70340552_70340703_70382548
H1_mix_00010225	chr10	-	2058	3	FSM	ENSG00000156574.10	ENST00000287139.8	2058	3	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_2	30.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTGTAGACTGAATAGGA	-1	True	NA	NA	False	ATTAAA	-36	NA	70441681	70431935	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_70433089_70435285_70435984_70441474
H1_mix_00010228	chr10	-	787	4	FSM	ENSG00000166228.9	ENST00000299299.4	787	4	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_3	105.707142615814	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGGCTCTAGAAACTTC	16	True	NA	-7	True	AATAAA	-18	NA	70888565	70883509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_70884049_70885151_70885233_70885797_70885930_70888530
H1_mix_00010233	chr10	-	2763	14	FSM	ENSG00000197746.15	ENST00000394936.8	2748	14	0	-15	0	15	multi-exon	FALSE	canonical	3	4305	junction_5	516.772013183248	771	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGACCCTTCAGCTGGA	-3	True	NA	-13	True	AATAAA	-31	NA	71851251	71816282	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_71817477_71818616_71818725_71819030_71819112_71819464_71819623_71819713_71819901_71820239_71820336_71821875_71822008_71825836_71825894_71828013_71828158_71828876_71829078_71831125_71831252_71831845_71831921_71834371_71834506_71851181
H1_mix_00010235	chr10	-	2479	10	FSM	ENSG00000138303.18	ENST00000672957.1	2479	10	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_4	10.3863633293794	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTTAGTATGATCACA	15	True	NA	-26	True	AATAAA	-14	NA	72216276	72096031	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_72097451_72128081_72128168_72133056_72133182_72152868_72152989_72161537_72161675_72196810_72196990_72203426_72203525_72210731_72210832_72213186_72213332_72216206
H1_mix_00010237	chr10	-	2047	10	NIC	ENSG00000138303.18	novel	2167	11	NA	NA	65	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_9	32.9211553432713	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTTGGTCTATCATTT	32	True	NA	-12	True	ATTAAA	-16	NA	72215908	72096520	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_72097451_72128081_72128168_72133056_72133182_72152868_72152989_72161537_72161675_72196810_72196990_72203426_72203525_72210731_72210832_72213186_72213332_72215781
H1_mix_00010239	chr10	-	3178	9	FSM	ENSG00000148719.16	ENST00000394903.6	3198	9	15	5	15	-5	multi-exon	FALSE	canonical	3	45	junction_1	34.9919633630352	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCGTGGTGGGTCTGCA	NA	False	NA	-5	True	AATATA	-15	NA	72355134	72332834	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_72334618_72335779_72335932_72336523_72336697_72338201_72338312_72340788_72340869_72340984_72341171_72343365_72343512_72344949_72345128_72354764
H1_mix_00010241	chr10	-	3094	9	NIC	ENSG00000148719.16	novel	3198	9	NA	NA	15	-2	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	40.167617554443	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATCTGTTAATATATGTT	NA	False	NA	-35	True	NA	NA	NA	72355134	72332864	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_72334618_72335833_72335932_72336523_72336697_72338201_72338312_72340788_72340869_72340984_72341171_72343365_72343512_72344949_72345128_72354764
H1_mix_00010242	chr10	-	2455	12	FSM	ENSG00000107745.20	ENST00000361114.10	2357	12	-77	-21	-25	21	multi-exon	FALSE	canonical	3	255	junction_1	22.4370561260453	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTCTAGGCCCTTTTCAT	NA	False	NA	8	True	AATAAA	-35	NA	72626156	72367318	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_72368356_72375782_72375873_72407928_72408038_72423233_72423372_72475099_72475298_72477173_72477257_72508154_72508270_72533745_72533790_72551178_72551342_72562894_72563064_72566632_72566795_72626009
H1_mix_00010243	chr10	-	397	1	FSM	ENSG00000215086.2	ENST00000428039.1	894	1	629	-132	629	132	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTCCATTGCCAAGAATG	NA	False	NA	-88	True	GATAAA	-9	NA	72917905	72917508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_72917500_72917900
H1_mix_00010245	chr10	-	2852	15	FSM	ENSG00000122884.13	ENST00000263556.3	2844	15	0	-8	0	1	multi-exon	FALSE	canonical	0	0	junction_5	58.0190415611415	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTTCTGTGTGGTGT	364	False	NA	-14	True	TTTAAA	-6	NA	73096974	73007215	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_73008293_73009806_73009904_73010968_73011038_73014223_73014290_73016845_73016900_73030270_73030371_73043886_73043958_73046924_73047102_73051052_73051250_73053350_73053591_73068845_73068984_73072028_73072181_73073730_73073828_73074807_73074916_73096765
H1_mix_00010247	chr10	-	632	1	FSM	ENSG00000272599.2	ENST00000621900.1	632	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTATTATTATTTAAAAC	NA	False	NA	-5	True	AATAAA	-17	NA	73125532	73124900	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_73124900_73125500
H1_mix_00010249	chr10	-	860	6	FSM	ENSG00000122882.11	ENST00000453402.5	884	6	24	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	172.796990714538	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCCTCCATCTGATCCC	-7	True	NA	NA	False	NA	NA	NA	73168071	73152345	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_73152422_73154255_73154449_73156274_73156454_73156567_73156656_73160433_73160552_73167865
H1_mix_00010250	chr10	-	2295	5	FSM	ENSG00000213551.7	ENST00000372950.6	2295	5	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_1	11.7765657133139	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTGCTGCATTCATGAAT	25	True	NA	0	True	AATAAA	-19	NA	73247255	73241953	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_73243520_73243842_73243930_73245921_73246177_73246687_73246829_73247009
H1_mix_00010251	chr10	-	2580	3	FSM	ENSG00000182180.14	ENST00000479005.1	2580	3	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	580.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCCGTAGCAAATGTATA	1	True	NA	-25	True	AATAAA	-26	NA	73252625	73248842	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_73250992_73251762_73252038_73252469
H1_mix_00010252	chr10	-	2585	3	FSM	ENSG00000182180.14	ENST00000372945.8	2579	3	0	-6	0	0	multi-exon	FALSE	canonical	3	1218	junction_1	129	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCCGTAGCAAATGTATA	-18	True	NA	-25	True	AATAAA	-26	NA	73252644	73248842	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_73250992_73251762_73252024_73252469
H1_mix_00010253	chr10	-	866	3	FSM	ENSG00000182180.14	ENST00000372940.3	866	3	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	675.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTACATAATTTGGCTA	NA	False	NA	-120	True	AAAAAG	-3	NA	73252693	73248937	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_73249319_73251762_73252024_73252469
H1_mix_00010255	chr10	-	2444	13	FSM	ENSG00000138279.16	ENST00000372921.10	2443	13	0	-1	0	1	multi-exon	FALSE	canonical	3	527	junction_12	122.406767242121	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTCTGTGTCTGGCTT	-2	True	NA	-6	True	TATAAA	-14	NA	73414058	73375099	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_73376218_73378910_73379024_73379878_73379955_73380030_73380202_73383174_73383346_73383576_73383691_73387688_73387784_73388311_73388415_73396518_73396584_73397163_73397275_73398180_73398386_73400802_73400858_73414011
H1_mix_00010258	chr10	-	834	1	FSM	ENSG00000229659.1	ENST00000440913.1	438	1	-52	-344	-52	344	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCTTCATCTGTAAAATG	NA	False	NA	NA	False	NA	NA	NA	73422748	73421914	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_73421900_73422700
H1_mix_00010259	chr10	-	3441	13	FSM	ENSG00000107758.16	ENST00000394828.6	3119	13	28	-350	0	-23	multi-exon	FALSE	canonical	3	19	junction_1	21.2895057611856	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAGAAAAATATTAGTGA	4	True	NA	NA	False	NA	NA	NA	73495996	73436455	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_73438421_73444724_73444823_73446491_73446577_73454411_73454490_73467552_73467679_73470686_73470782_73470886_73470965_73471069_73471210_73471467_73471614_73474918_73475031_73478498_73478624_73479316_73479518_73495804
H1_mix_00010261	chr10	-	3139	14	FSM	ENSG00000107758.16	ENST00000394829.6	3149	14	10	0	10	0	multi-exon	FALSE	canonical	3	34	junction_4	19.4525671021566	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGTGTTGGGTTTTAT	-14	True	NA	-5	True	AATAAA	-25	NA	73496014	73436805	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_73438421_73439871_73439902_73444724_73444823_73446491_73446577_73454411_73454490_73467552_73467679_73470686_73470782_73470886_73470965_73471069_73471210_73471467_73471614_73474918_73475031_73478498_73478624_73479316_73479518_73495804
H1_mix_00010262	chr10	-	3082	13	NIC	ENSG00000107758.16	novel	3519	14	NA	NA	5	-1	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	20.5809715244176	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTCTGTGTTGGGTTTTA	9	True	NA	-6	True	AATAAA	-24	NA	73495991	73436806	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_73438421_73444724_73444823_73446491_73446574_73454411_73454490_73467552_73467679_73470686_73470782_73470886_73470965_73471069_73471210_73471467_73471614_73474918_73475031_73478498_73478624_73479316_73479518_73495804
H1_mix_00010263	chr10	-	2418	12	FSM	ENSG00000107758.16	ENST00000342558.3	2418	12	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	15.3094795891061	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGCTCATTGAATATTTT	4	True	NA	2	True	AATAAA	-29	NA	73495996	73443779	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_73444823_73446491_73446574_73454411_73454490_73467552_73467679_73470686_73470782_73470886_73470965_73471069_73471210_73471467_73471614_73474918_73475031_73478498_73478624_73479316_73479518_73495804
H1_mix_00010264	chr10	-	2439	12	ISM	ENSG00000107758.16	ENST00000394828.6	3119	13	10	6974	10	0	5prime_fragment	FALSE	canonical	3	34	junction_2	16.4763792861225	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGCTCATTGAATATTTT	-14	True	NA	2	True	AATAAA	-29	NA	73496014	73443779	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_-_73444823_73446491_73446577_73454411_73454490_73467552_73467679_73470686_73470782_73470886_73470965_73471069_73471210_73471467_73471614_73474918_73475031_73478498_73478624_73479316_73479518_73495804
H1_mix_00010266	chr10	-	6148	22	NIC	ENSG00000166348.20	novel	6792	24	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_21	24.5908929919308	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGTCATTCTTCCCTT	NA	False	NA	-13	True	AATAAA	-23	NA	73591433	73497537	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_73499189_73500654_73500839_73504849_73504991_73505307_73505427_73516374_73517748_73519796_73519993_73520907_73521028_73523582_73523751_73526646_73526781_73529679_73529912_73530142_73530524_73530703_73530836_73536268_73536438_73539443_73539594_73541374_73541522_73541632_73541739_73542802_73542886_73543017_73543132_73545537_73545673_73571420_73571514_73575511_73575676_73591277
H1_mix_00010267	chr10	-	6247	23	FSM	ENSG00000166348.20	ENST00000339859.8	6247	23	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_22	32.5405024165372	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGTCATTCTTCCCTT	9049	False	NA	-13	True	AATAAA	-23	NA	73625650	73497537	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_73499189_73500654_73500839_73504849_73504991_73505307_73505427_73516374_73517748_73519796_73519993_73520907_73521028_73523582_73523751_73526646_73526781_73529679_73529912_73530142_73530524_73530703_73530836_73534599_73534771_73536268_73536438_73539443_73539594_73541374_73541522_73541632_73541739_73542802_73542886_73543017_73543132_73545537_73545673_73571420_73571514_73575511_73575676_73625566
H1_mix_00010271	chr10	-	708	2	FSM	ENSG00000166348.20	ENST00000498213.1	815	2	107	0	10	0	multi-exon	FALSE	canonical	2	9	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATTTGGAAGGTGGTAAA	NA	False	NA	NA	False	NA	NA	NA	73591433	73575809	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_73576362_73591277
H1_mix_00010273	chr10	-	1433	7	Fusion	ENSG00000166317.12_ENSG00000177791.12	novel	1300	6	NA	NA	3553	-42	multi-exon	FALSE	canonical	3	26	junction_5	3.43592135468138	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTCTTCCTTTGATATT	8615	False	NA	-10	True	AATAAA	-17	NA	73647476	73631653	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr10_-_73632162_73633899_73634066_73634483_73634734_73637743_73637923_73639944_73640036_73641410_73641513_73647339
H1_mix_00010274	chr10	-	2715	8	FSM	ENSG00000172650.15	ENST00000374094.9	2719	8	0	4	0	-4	multi-exon	FALSE	canonical	3	10	junction_7	10.5830052442584	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATATGCATTGATTTTTG	NA	False	NA	-23	True	GATAAA	-33	NA	73698109	73674298	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_73676075_73676718_73676771_73680070_73680107_73682693_73682795_73692042_73692078_73694735_73694805_73697094_73697164_73697532
H1_mix_00010275	chr10	-	1913	12	FSM	ENSG00000271816.1	ENST00000580790.1	1913	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	28.1395577567204	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAATTACCCAACCTC	5	True	NA	NA	False	ATTAAA	-10	NA	73730487	73699150	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_73699589_73704985_73705079_73713203_73713333_73718014_73718166_73719159_73719300_73720537_73720660_73721361_73721505_73722388_73722578_73725960_73726041_73727292_73727483_73728378_73728588_73730458
H1_mix_00010276	chr10	-	7919	9	Fusion	ENSG00000272140.2_ENSG00000242338.6	novel	1716	10	NA	NA	-21	4350	intron_retention	FALSE	canonical	3	16	junction_4	25.0496382209404	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTCTATTTTGGTTAAT	2	True	NA	NA	False	ATTAAA	-19	NA	73730490	73711492	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr10_-_73718166_73719159_73719300_73720537_73720660_73721361_73721505_73722388_73722578_73725960_73726041_73727292_73727483_73728378_73728588_73730317
H1_mix_00010277	chr10	-	1236	1	FSM	ENSG00000279088.1	ENST00000625041.1	1236	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTGTAATAATAAAACTCT	82	False	NA	-34	True	NA	NA	NA	73744230	73742994	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_73743000_73744200
H1_mix_00010278	chr10	-	262	2	Genic_Genomic	ENSG00000279088.1	novel	1236	1	NA	NA	-31	0	multi-exon	FALSE	canonical	3	70	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTGTAATAATAAAACTCT	1	True	NA	-34	True	NA	NA	NA	73744261	73742994	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr10_-_73743212_73744216
H1_mix_00010281	chr10	-	3763	15	FSM	ENSG00000166507.19	ENST00000309979.11	3758	15	0	-5	0	0	multi-exon	FALSE	canonical	3	60	junction_6	10.3354452526937	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGCCTCCCTGGAGTGG	-4	True	NA	-1	True	AATAAA	-20	NA	73811598	73801910	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_73802577_73802673_73802777_73802971_73803082_73803188_73803360_73803573_73803749_73803892_73804017_73804772_73804870_73805586_73805770_73805899_73806029_73806288_73806475_73806656_73806812_73807107_73807196_73807383_73808730_73810798_73810904_73811473
H1_mix_00010283	chr10	-	651	2	FSM	ENSG00000166507.19	ENST00000398701.2	545	2	-22	-84	-22	84	multi-exon	FALSE	canonical	3	90	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTCTAAAGTTGCATCAC	-3	True	NA	86	True	NA	NA	NA	73811820	73810599	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_73810904_73811473
H1_mix_00010285	chr10	-	3632	20	NIC	ENSG00000148660.21	novel	3818	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	57	junction_6	10.8928297339208	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTTACTGCTGTTGG	16	True	NA	-1	True	AATAAA	-18	NA	73874519	73812500	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_73814506_73815002_73815248_73817022_73817118_73817478_73817555_73821681_73821731_73824039_73824085_73825278_73825348_73837467_73837512_73842168_73842212_73842457_73842542_73847224_73847348_73847987_73848083_73848525_73848610_73849012_73849116_73849260_73849334_73852253_73852320_73853191_73853247_73860829_73860890_73872988_73873084_73874396
H1_mix_00010286	chr10	-	3563	19	FSM	ENSG00000148660.21	ENST00000351293.7	3563	19	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	17.5657495016739	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTTACTGCTGTTGG	16	True	NA	-1	True	AATAAA	-18	NA	73874519	73812500	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_73814506_73815002_73815248_73817022_73817118_73817478_73817555_73821681_73821731_73824039_73824085_73837467_73837512_73842168_73842212_73842457_73842542_73847224_73847348_73847987_73848083_73848525_73848610_73849012_73849116_73849260_73849334_73852253_73852320_73853191_73853247_73860829_73860890_73872988_73873084_73874396
H1_mix_00010287	chr10	-	3818	21	FSM	ENSG00000148660.21	ENST00000322680.7	3818	21	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_5	23.4198099906895	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTTACTGCTGTTGG	-9	True	NA	-1	True	AATAAA	-18	NA	73874591	73812500	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_73814506_73815002_73815248_73817022_73817118_73817478_73817555_73819531_73819646_73821681_73821731_73824039_73824085_73825278_73825348_73837467_73837512_73842168_73842212_73842457_73842542_73847224_73847348_73847987_73848083_73848525_73848610_73849012_73849116_73849260_73849334_73852253_73852320_73853191_73853247_73860829_73860890_73872988_73873084_73874396
H1_mix_00010288	chr10	-	4889	9	FSM	ENSG00000185009.13	ENST00000355264.9	4889	9	0	0	0	0	multi-exon	TRUE	canonical	3	101	junction_8	90.1622669136042	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAGGATTAGTTTCATT	-12	True	NA	-5	True	AATAAA	-18	NA	74150828	74120254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_74123911_74124379_74124525_74126147_74126356_74129107_74129242_74129906_74129993_74134026_74134165_74136631_74136804_74138106_74138383_74150754
H1_mix_00010291	chr10	-	250	1	FSM	ENSG00000236900.1	ENST00000436122.1	256	1	-121	127	-121	-127	mono-exon	FALSE	NA	NA	NA	NA	NA	735	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACCAGCCTGTTCAGAACA	NA	False	NA	NA	False	NA	NA	NA	74344926	74344676	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_74344700_74344900
H1_mix_00010294	chr10	-	1378	5	FSM	ENSG00000165644.11	ENST00000470947.5	796	5	-569	-13	-51	0	multi-exon	FALSE	canonical	3	123	junction_3	11.1439445440113	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGAGCCTCCGTGTGT	NA	False	NA	-9	True	AATAAA	-20	NA	75236081	75233970	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_75234226_75234609_75234744_75234937_75234993_75235059_75235179_75235266
H1_mix_00010297	chr10	-	334	1	FSM	ENSG00000273248.1	ENST00000609182.1	354	1	-22	42	-22	-42	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGCAGAATGAAAATCAATA	253	False	NA	NA	False	NA	NA	NA	75409348	75409014	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_75409000_75409300
H1_mix_00010299	chr10	-	2958	2	FSM	ENSG00000156113.24	ENST00000480683.2	2963	2	0	5	0	-5	multi-exon	FALSE	canonical	3	29	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATTTAACCTCTCTGGT	1082	False	NA	-15	True	AATAAA	-17	NA	77637821	77634114	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_77636516_77637264
H1_mix_00010300	chr10	-	896	2	FSM	ENSG00000156113.24	ENST00000481070.1	896	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGTGAGCCAGCTGCCTT	1114	False	NA	NA	False	AATAAA	-21	NA	77637789	77636198	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_77636570_77637264
H1_mix_00010301	chr10	-	4296	20	FSM	ENSG00000151208.17	ENST00000424842.5	4292	20	0	-4	0	4	multi-exon	FALSE	canonical	2	2	junction_17	55.1217237768646	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGAAGATGTGAGTTT	6936	False	NA	-7	True	AATAAA	-20	NA	77829442	77790786	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_77792544_77794007_77794118_77794848_77794959_77796060_77796189_77796450_77796595_77805664_77805862_77806757_77806929_77807795_77807945_77809546_77809731_77811093_77811235_77811923_77812058_77812214_77812378_77816550_77816702_77817006_77817097_77817776_77817890_77819320_77819466_77819894_77820019_77824383_77824477_77828881_77828986_77829354
H1_mix_00010303	chr10	-	8410	32	FSM	ENSG00000151208.17	ENST00000372391.7	7644	32	-762	-4	-762	4	multi-exon	FALSE	canonical	3	84	junction_29	43.8839876315661	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGAAGATGTGAGTTT	NA	False	NA	-7	True	AATAAA	-20	NA	77927517	77790786	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_77792544_77794007_77794118_77794848_77794959_77796060_77796189_77796450_77796595_77805664_77805862_77806757_77806929_77807795_77807945_77809546_77809731_77811093_77811235_77811923_77812058_77812214_77812378_77816550_77816702_77817006_77817097_77817776_77817890_77819320_77819466_77819894_77820019_77821081_77822102_77824383_77824477_77828881_77828986_77829354_77829531_77830216_77830345_77830740_77830874_77833913_77834040_77835737_77835923_77841880_77842194_77843446_77843707_77853353_77853538_77854226_77854371_77856729_77856893_77869128_77869198_77926216
H1_mix_00010304	chr10	-	6610	31	FSM	ENSG00000148606.14	ENST00000372371.8	6610	31	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_18	24.2502004573616	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCATGAATAGTTACAAATT	-9	True	NA	-30	True	AATAAA	-23	NA	78029515	77975148	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_77977627_77980140_77980274_77981427_77981560_77982153_77982319_77982652_77982818_77983919_77984013_77984204_77984299_77985169_77985341_77985902_77985986_77986072_77986160_77991053_77991168_77993196_77993368_77999980_78000119_78000975_78001095_78002196_78002309_78004715_78004889_78007701_78007867_78009536_78009676_78009863_78009992_78010470_78010541_78013649_78013791_78017574_78017717_78019161_78019266_78021545_78021683_78021859_78022023_78022144_78022385_78024548_78024704_78024970_78025143_78025621_78025760_78026093_78026230_78029363
H1_mix_00010305	chr10	-	4934	4	FSM	ENSG00000165424.7	ENST00000372336.4	4930	4	0	-4	0	4	multi-exon	FALSE	canonical	3	41	junction_1	7.11805216802087	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACAGGTTTCCTTGTTCA	21	True	NA	3	True	ATTAAA	-24	NA	79445624	79382320	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_79386459_79394275_79394441_79432557_79432759_79445194
H1_mix_00010306	chr10	-	4903	1	FSM	ENSG00000280355.1	ENST00000623504.1	2122	1	-1267	-1514	-1267	1514	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATATGCATATATGAAAG	NA	False	NA	NA	False	NA	NA	NA	79685361	79680458	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_79680500_79685400
H1_mix_00010307	chr10	-	490	1	FSM	ENSG00000224886.2	ENST00000452173.2	490	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGTTGTCGCGTGGGGGG	NA	False	NA	NA	False	NA	NA	NA	79684983	79684493	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_79684500_79685000
H1_mix_00010308	chr10	-	1258	7	FSM	ENSG00000225484.7	ENST00000601369.6	1235	7	0	-23	0	23	multi-exon	FALSE	canonical	3	44	junction_1	43.6058737124051	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCAGCACTTTTGGAGG	63	False	NA	0	True	AATAAA	-40	NA	79826516	79691476	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_79692057_79766270_79766325_79804484_79804528_79806038_79806123_79808758_79808833_79814612_79814717_79826197
H1_mix_00010310	chr10	-	4435	6	FSM	ENSG00000225484.7	ENST00000665716.1	4096	6	-110	-229	0	118	multi-exon	FALSE	canonical	3	111	junction_3	22.6627447587445	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCATTTCACAATTAAG	NA	False	NA	NA	False	TTTAAA	-2	NA	79826594	79762591	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_79766325_79804484_79804528_79806038_79806123_79808758_79808833_79814612_79814717_79826197
H1_mix_00010311	chr10	-	1216	6	NIC	ENSG00000225484.7	novel	4096	6	NA	NA	12	-24	combination_of_known_junctions	FALSE	canonical	3	28	junction_4	53.3906358830835	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTAAACGTTATGTTTTC	107	False	NA	-44	True	NA	NA	NA	79826472	79765819	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_79766325_79804484_79804528_79806038_79806123_79808758_79808964_79814612_79814717_79826197
H1_mix_00010312	chr10	-	5437	6	FSM	ENSG00000225484.7	ENST00000496359.6	716	6	-4402	-319	-4096	0	multi-exon	FALSE	canonical	3	39	junction_1	48.5962961551598	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGCTTTAAGTTCTAGGA	NA	False	NA	NA	False	AATAAA	-16	NA	79830690	79797388	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_79798028_79804484_79804528_79806038_79806123_79808758_79808833_79814612_79814717_79826197
H1_mix_00010315	chr10	-	6721	15	FSM	ENSG00000122359.18	ENST00000372231.7	6720	15	0	-1	0	1	multi-exon	TRUE	canonical	3	243	junction_14	64.3610669487036	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGTTGTGTTTTAGCT	1	True	NA	-2	True	AATAAA	-19	NA	80205572	80150887	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_80155913_80157640_80157764_80157966_80158026_80159099_80159196_80161934_80162029_80163348_80163406_80163533_80163614_80164052_80164144_80166083_80166198_80166889_80166985_80167225_80167314_80168968_80169359_80170799_80170916_80172806_80172870_80205342
H1_mix_00010316	chr10	-	750	6	FSM	ENSG00000122359.18	ENST00000447489.1	750	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	228.537436758182	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACAGCCTCTTGCTGCTA	9341	False	NA	-81	True	NA	NA	NA	80162012	80155639	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_80155913_80156377_80156499_80157640_80157764_80157966_80158026_80159099_80159196_80161934
H1_mix_00010319	chr10	-	465	1	FSM	ENSG00000234743.1	ENST00000441206.1	465	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTCCCAAGGTGGCAGT	116	False	NA	NA	False	NA	NA	NA	80247683	80247218	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_80247200_80247700
H1_mix_00010320	chr10	-	2636	3	FSM	ENSG00000151224.13	ENST00000485270.5	2661	3	25	0	25	0	multi-exon	FALSE	canonical	3	14	junction_2	2.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTATGCTTAGTTATTCTC	NA	False	NA	-1	True	AATAAA	-18	NA	80275454	80271819	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_80273884_80274519_80274654_80275016
H1_mix_00010321	chr10	-	3384	9	FSM	ENSG00000151224.13	ENST00000372213.8	3384	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	3.78937659780603	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTATGCTTAGTTATTCTC	-3	True	NA	-1	True	AATAAA	-18	NA	80289658	80271819	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_80273884_80274519_80274654_80275016_80275200_80276375_80276595_80280172_80280317_80280679_80280793_80283915_80284039_80285511_80285590_80289332
H1_mix_00010325	chr10	-	6331	19	NNC	ENSG00000062650.20	novel	6310	19	NA	NA	-40	-1	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_16	114.149633765899	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGTTGTCTTTAACATAA	NA	False	NA	NA	False	AATAAA	-18	NA	86521832	86435256	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_86437609_86437919_86438016_86443274_86443364_86446241_86446450_86451966_86452132_86453219_86453336_86453655_86453832_86458988_86459066_86460398_86460497_86461175_86461288_86467278_86467507_86470991_86471104_86472207_86472345_86472611_86472765_86473877_86473974_86497200_86497302_86499717_86500744_86517570_86518092_86521364
H1_mix_00010326	chr10	-	4341	1	FSM	ENSG00000272631.1	ENST00000608826.1	6545	1	2068	136	2068	-136	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATACCTTTCAGGACATT	2038	False	NA	NA	False	NA	NA	NA	86754230	86749889	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_86749900_86754200
H1_mix_00010327	chr10	-	2277	1	FSM	ENSG00000272734.1	ENST00000609170.1	2205	1	-22	-50	-22	50	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATAACTTTCATTACAGT	7044	False	NA	NA	False	AATAAA	-13	NA	86967571	86965294	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_86965300_86967600
H1_mix_00010328	chr10	-	3391	13	FSM	ENSG00000148672.10	ENST00000277865.5	3300	13	-195	104	-195	-104	multi-exon	TRUE	canonical	3	620	junction_10	44.1122306043221	269	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTTCAGAGAAACTTCCCG	-14	True	NA	NA	False	NA	NA	NA	87095038	87050305	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_87051871_87053341_87053405_87057690_87057783_87059149_87059274_87060160_87060242_87060687_87060826_87060914_87061053_87062655_87062836_87068062_87068158_87074550_87074615_87075967_87076024_87076575_87076657_87094324
H1_mix_00010331	chr10	-	938	6	NIC	ENSG00000223482.9	novel	5671	7	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	103.743144351808	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTTTTGTTTTTATTTA	85	False	NA	-3	True	AATAAA	-20	NA	87342535	87208167	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_87208513_87246114_87246213_87288441_87288496_87326629_87326673_87336785_87336890_87342241
H1_mix_00010333	chr10	-	855	6	FSM	ENSG00000223482.9	ENST00000433530.7	916	6	61	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	102.455063320463	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCTCAAAAAGATTGTCCA	-1	True	NA	NA	False	ATTAAA	-40	NA	87342345	87238397	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_87238850_87246114_87246213_87288441_87288496_87326629_87326673_87336785_87336890_87342241
H1_mix_00010334	chr10	-	536	5	FSM	ENSG00000223482.9	ENST00000666515.2	536	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	111.244100967197	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTCTATTGTTTAAAATT	-10	True	NA	-4	True	AATAAA	-18	NA	87342393	87238666	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_87238850_87288441_87288496_87326629_87326673_87336785_87336890_87342241
H1_mix_00010335	chr10	-	7588	6	FSM	ENSG00000223482.9	ENST00000663113.1	6174	6	91	-1505	0	-1	multi-exon	FALSE	canonical	3	57	junction_1	90.4199093120536	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTTCTCTATTGTTTAA	-1	True	NA	-8	True	AATAAA	-14	NA	87342345	87238670	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_87245856_87246114_87246213_87288441_87288496_87326629_87326673_87336785_87336890_87342241
H1_mix_00010336	chr10	-	4045	4	FSM	ENSG00000223482.9	ENST00000654503.2	4041	4	18	-22	1	22	multi-exon	FALSE	canonical	3	249	junction_2	14.1970262926979	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTTTTTGGTTATGGAC	-5	True	NA	NA	False	AATAAA	-17	NA	87342388	87284744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_87288496_87326629_87326673_87336785_87336890_87342241
H1_mix_00010337	chr10	-	1014	5	FSM	ENSG00000223482.9	ENST00000655272.2	1039	5	25	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	120.40348832156	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTTGCTTGTACAGCCT	254	False	NA	NA	False	ATTAAA	-24	NA	87342366	87287958	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_87288496_87326629_87326673_87330891_87331097_87336785_87336890_87342241
H1_mix_00010338	chr10	-	933	5	FSM	ENSG00000223482.9	ENST00000668676.1	933	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	124.054423540638	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTTGCTTGTACAGCCT	-3	True	NA	NA	False	ATTAAA	-24	NA	87342386	87287958	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_87288496_87307956_87308061_87326629_87326673_87336785_87336890_87342241
H1_mix_00010339	chr10	-	3270	3	FSM	ENSG00000223482.9	ENST00000662586.1	3270	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	135.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTATTATTTACGTATGA	66	False	NA	NA	False	AATAAA	-10	NA	87342554	87331961	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_87334815_87336785_87336890_87342241
H1_mix_00010340	chr10	-	7578	10	FSM	ENSG00000138138.14	ENST00000680024.1	4334	10	-15	-3229	-15	3229	multi-exon	FALSE	canonical	3	235	junction_9	44.5396203147016	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGATTTATATTTCTTT	-38	True	NA	NA	False	AATAAA	-23	NA	87818241	87748282	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_87754808_87756788_87756923_87767672_87767724_87770951_87771042_87776320_87776428_87784469_87784671_87790309_87790431_87792656_87792756_87814437_87814613_87818166
H1_mix_00010342	chr10	-	2409	7	FSM	ENSG00000184719.12	ENST00000331772.9	2409	7	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	5.15320827791344	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGGTTAATGTCACTTA	0	True	NA	NA	False	AATAAA	-24	NA	88583318	88284101	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_88285507_88314465_88314642_88362551_88362726_88572902_88573062_88581566_88581710_88582201_88582308_88583072
H1_mix_00010344	chr10	-	1610	6	FSM	ENSG00000152766.6	ENST00000371930.5	3858	6	200	2048	200	857	multi-exon	FALSE	canonical	0	0	junction_2	0.489897948556636	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACAATGAGGTAGGATCT	9494	False	NA	NA	False	GATAAA	-22	NA	88851644	88821943	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_88823019_88823279_88823379_88826037_88826116_88828558_88828667_88831834_88832027_88851586
H1_mix_00010345	chr10	-	2500	10	FSM	ENSG00000107798.18	ENST00000336233.10	2496	10	0	-4	0	1	multi-exon	FALSE	canonical	3	189	junction_9	20.4999247213312	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTATGTTTTTTCTCT	1	True	NA	-4	True	AATAAA	-30	NA	89251775	89213567	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_89215062_89215937_89216010_89222510_89222583_89223683_89223831_89225091_89225229_89226894_89227005_89228199_89228399_89245675_89245794_89247537_89247650_89251736
H1_mix_00010349	chr10	-	1151	2	NNC	ENSG00000152782.18	novel	2513	6	NA	NA	25	-8455	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTGGTGGTGTTAGAT	1302	False	NA	-5	True	AATAAA	-13	NA	89643931	89634149	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_89635066_89643696
H1_mix_00010350	chr10	-	4237	3	FSM	ENSG00000148680.16	ENST00000371719.2	3033	3	-731	-473	-390	473	multi-exon	FALSE	canonical	3	25	junction_1	24.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGACTTGAATGCCCGA	161	False	NA	NA	False	NA	NA	NA	90858429	90740349	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_90742529_90748833_90749595_90857132
H1_mix_00010351	chr10	-	3050	3	FSM	ENSG00000148680.16	ENST00000277874.10	3028	3	0	-22	0	22	multi-exon	FALSE	canonical	3	47	junction_1	13.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCTGTCTGTAGAATGGC	-9	True	NA	2	True	ATTAAA	-18	NA	90857698	90740800	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_90742529_90748838_90749595_90857132
H1_mix_00010352	chr10	-	1895	9	FSM	ENSG00000148677.7	ENST00000371697.4	1790	9	2	-107	2	107	multi-exon	FALSE	canonical	0	0	junction_1	0.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCCGTACAACAGCACTCC	2	True	NA	92	True	NA	NA	NA	90921085	90911988	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_90912977_90915542_90915642_90915781_90915881_90916170_90916270_90917731_90917831_90918864_90918973_90919130_90919269_90920168_90920349_90921000
H1_mix_00010353	chr10	-	2528	2	FSM	ENSG00000119938.9	ENST00000238994.6	2541	2	13	0	13	0	multi-exon	FALSE	canonical	2	2	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTGAGTATATTTTCTTT	8	True	NA	-4	True	AATAAA	-15	NA	91633058	91628441	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_91630867_91632955
H1_mix_00010354	chr10	-	501	2	FSM	ENSG00000228701.3	ENST00000662946.1	503	2	0	2	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACCTAGTTTGTGGTCTT	7958	False	NA	-3	True	AATAAA	-16	NA	91790293	91782838	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_91783161_91790114
H1_mix_00010355	chr10	-	814	2	FSM	ENSG00000228701.3	ENST00000668345.2	823	2	5	4	5	0	multi-exon	FALSE	canonical	2	5	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACCTAGTTTGTGGTCTT	9229	False	NA	-3	True	AATAAA	-16	NA	91798304	91782838	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_91783161_91797812
H1_mix_00010358	chr10	-	2979	2	FSM	ENSG00000174721.10	ENST00000311575.6	2553	2	-426	0	-426	0	multi-exon	FALSE	canonical	3	1450	junction_1	0	224	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTGTGTTGCAACC	NA	False	NA	0	True	TATAAA	-19	NA	91909912	91906583	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_91909048_91909397
H1_mix_00010359	chr10	-	6302	25	FSM	ENSG00000119912.18	ENST00000650060.1	5877	25	-17	-408	0	408	multi-exon	FALSE	canonical	3	16	junction_11	79.6748601086524	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCTAAAGTGCTGGGATT	-28	True	NA	NA	False	NA	NA	NA	92574093	92451275	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_92454540_92455575_92455644_92456358_92456432_92461190_92461253_92463730_92464004_92465675_92465844_92468878_92468991_92470253_92470346_92474840_92474962_92475883_92475995_92478644_92478790_92483254_92483338_92487195_92487319_92490492_92490596_92504793_92504898_92506441_92506523_92507574_92507667_92508112_92508206_92508727_92508891_92510049_92510163_92514919_92515043_92531747_92531918_92534577_92534786_92537365_92537551_92573921
H1_mix_00010360	chr10	-	6285	25	FSM	ENSG00000119912.18	ENST00000265986.11	5894	25	17	-408	0	408	multi-exon	TRUE	canonical	3	225	junction_20	27.7318509219193	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCTAAAGTGCTGGGATT	-11	True	NA	NA	False	NA	NA	NA	92574076	92451275	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_92454540_92455575_92455644_92456358_92456432_92461190_92461253_92463730_92464004_92465675_92465844_92468878_92468991_92470253_92470346_92474840_92474962_92475883_92475995_92479276_92479422_92483254_92483338_92487195_92487319_92490492_92490596_92504793_92504898_92506441_92506523_92507574_92507667_92508112_92508206_92508727_92508891_92510049_92510163_92514919_92515043_92531747_92531918_92534577_92534786_92537365_92537551_92573921
H1_mix_00010364	chr10	-	7135	54	FSM	ENSG00000138119.17	ENST00000359263.9	6860	54	-275	0	-275	0	multi-exon	FALSE	canonical	1	6	junction_16	10.7165825065381	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGCTGTTTGTTGTAA	NA	False	NA	-2	True	AATAAA	-16	NA	93482609	93306428	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_93307002_93310019_93310168_93310533_93310644_93313019_93313211_93316713_93316814_93319871_93320014_93323077_93323174_93323269_93323359_93325825_93325966_93328762_93328912_93329663_93329835_93333220_93333313_93333757_93333914_93335920_93336047_93337814_93337914_93340152_93340165_93343855_93343933_93347616_93347783_93349807_93349970_93351196_93351296_93351412_93351572_93351664_93351847_93353810_93353889_93355627_93355737_93356674_93356849_93359832_93359979_93361451_93361558_93363960_93364076_93366391_93366556_93369644_93369777_93372929_93373086_93374762_93374956_93377322_93377430_93379862_93379988_93381218_93381397_93387796_93387914_93389029_93389155_93392916_93392956_93396141_93396225_93397246_93397291_93397387_93397457_93399391_93399496_93401417_93401545_93402231_93402348_93402859_93402891_93404022_93404074_93404156_93404220_93408786_93408916_93409572_93409740_93426070_93426159_93431407_93431517_93452049_93452142_93456881_93456938_93482106
H1_mix_00010367	chr10	-	3144	14	FSM	ENSG00000148690.12	ENST00000359204.5	3109	14	29	-64	29	64	multi-exon	FALSE	canonical	3	399	junction_13	26.4324527089905	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGACTGATATTAGTAGTA	1	True	NA	NA	False	AAAAAG	-20	NA	93702563	93667818	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_93669869_93670769_93670849_93676652_93676692_93681479_93681599_93684055_93684099_93685245_93685360_93687403_93687450_93692008_93692094_93692645_93692730_93694860_93694938_93698135_93698182_93698300_93698397_93700029_93700107_93702374
H1_mix_00010368	chr10	-	4780	2	FSM	ENSG00000148690.12	ENST00000460752.1	4780	2	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTTTCAATTGCTTATC	NA	False	NA	-10	True	ATTAAA	-20	NA	93675304	93669623	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_93669869_93670769
H1_mix_00010369	chr10	-	3458	21	FSM	ENSG00000173145.11	ENST00000371361.3	3455	21	0	-3	0	3	multi-exon	FALSE	canonical	3	178	junction_12	18.2087890865922	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGATATGATAATTTTTT	10	True	NA	1	True	AATAAA	-28	NA	94362939	94333222	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_94334306_94334633_94334719_94337776_94337875_94338607_94338737_94339738_94339921_94340275_94340348_94340432_94340497_94341672_94341746_94344414_94344516_94344852_94344934_94346424_94346557_94349249_94349379_94350112_94350289_94352309_94352404_94352895_94353058_94354962_94355094_94356534_94356592_94357173_94357332_94358082_94358216_94361664_94361873_94362829
H1_mix_00010370	chr10	-	2190	10	FSM	ENSG00000173145.11	ENST00000463649.5	2190	10	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_2	21.5148527508066	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATGACTTTCAAAGAAAA	10	True	NA	43	True	AATAAA	-10	NA	94362939	94346475	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_94346557_94349249_94349379_94350112_94350289_94352309_94352404_94352895_94353058_94354962_94355094_94356534_94356592_94357173_94358216_94361664_94361873_94362829
H1_mix_00010372	chr10	-	1436	7	FSM	ENSG00000107438.9	ENST00000329399.7	1431	7	0	-5	0	5	multi-exon	FALSE	canonical	3	1178	junction_6	176.130081347723	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGTCTGTTATCTGATT	0	True	NA	0	True	AATAAA	-21	NA	95291003	95237566	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_95238112_95238567_95238686_95247214_95247367_95263863_95264064_95268777_95268863_95271632_95271785_95290819
H1_mix_00010373	chr10	-	850	6	FSM	ENSG00000107438.9	ENST00000477757.5	850	6	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_5	560.944560540523	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATCAAATCTACTGTGAGA	-9	True	NA	NA	False	NA	NA	NA	95291012	95238009	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_95238112_95238567_95238686_95247214_95247367_95263863_95264064_95268777_95268863_95290819
H1_mix_00010374	chr10	-	4653	14	NIC	ENSG00000095637.23	novel	7348	33	NA	NA	54	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	56.2352413248481	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTGTTCTGGTCATTC	8209	False	NA	-1	True	AATAAA	-23	NA	95384054	95311772	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_95315127_95318319_95318433_95321962_95322022_95339132_95339328_95341284_95341411_95341563_95341679_95346405_95346453_95354881_95354968_95357630_95357804_95367649_95367700_95371983_95372050_95375972_95376057_95381684_95381800_95383984
H1_mix_00010375	chr10	-	5927	25	FSM	ENSG00000095637.23	ENST00000371249.6	5927	25	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_20	22.0548558523212	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTGTTCTGGTCATTC	6	True	NA	-1	True	AATAAA	-23	NA	95561378	95311772	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_95315127_95318319_95318433_95321962_95322022_95339132_95339328_95341284_95341411_95341563_95341679_95346405_95346453_95354881_95354968_95357630_95357804_95367649_95367700_95381684_95381800_95383984_95384115_95384237_95384286_95397219_95397284_95399016_95399190_95406117_95406148_95410632_95410778_95414493_95414863_95421960_95422074_95422189_95422217_95432447_95432577_95437489_95437556_95441125_95441181_95491034_95491121_95561319
H1_mix_00010377	chr10	-	3346	18	FSM	ENSG00000059573.9	ENST00000371221.3	3337	18	0	-9	0	5	multi-exon	FALSE	canonical	3	108	junction_12	184.727125042977	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGTGATTGAAGTTTTCTC	-7	True	NA	-10	True	AATAAA	-20	NA	95656706	95605935	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_95606944_95610196_95610293_95611255_95611443_95613741_95613864_95613965_95614162_95616476_95616615_95621030_95621252_95625361_95625456_95626702_95626777_95627441_95627587_95628367_95628493_95632958_95633050_95633496_95633650_95637092_95637198_95637286_95637437_95642991_95643207_95653289_95653406_95656596
H1_mix_00010378	chr10	-	3370	18	FSM	ENSG00000059573.9	ENST00000371224.7	3352	18	0	-18	0	18	multi-exon	TRUE	canonical	3	690	junction_7	71.2542113124395	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCCCTTAATTGTTGT	-12	True	NA	3	True	AATAAA	-33	NA	95656711	95605922	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_95606944_95610196_95610293_95611255_95611443_95613741_95613864_95613965_95614162_95616476_95616615_95621030_95621252_95625361_95625456_95626702_95626777_95627441_95627587_95628367_95628493_95632958_95633050_95633490_95633650_95637092_95637198_95637286_95637437_95642991_95643207_95653289_95653406_95656596
H1_mix_00010380	chr10	-	6108	14	FSM	ENSG00000119977.22	ENST00000614499.5	2552	14	66	-3622	0	31	multi-exon	FALSE	canonical	3	232	junction_4	77.191454903112	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGTAATAAAATAGTAATAAA	-9	True	NA	NA	False	AATAGA	-6	NA	95693923	95659791	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_95664301_95680471_95680610_95682650_95682805_95683100_95683181_95683521_95683630_95684498_95684625_95685555_95685637_95686494_95686531_95687043_95687160_95687246_95687356_95687591_95687720_95692919_95693039_95693352_95693477_95693643
H1_mix_00010381	chr10	-	2426	13	NIC	ENSG00000119977.22	novel	2518	14	NA	NA	3	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_4	173.235068299952	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAGCAGCATGGTAGAAG	-2	True	NA	-22	True	AATAAA	-27	NA	95693916	95663400	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_95664301_95680471_95680610_95682650_95682805_95683100_95683196_95683521_95683630_95684498_95684625_95686494_95686531_95687043_95687160_95687246_95687356_95687591_95687720_95692919_95693039_95693352_95693477_95693643
H1_mix_00010385	chr10	-	2380	13	FSM	ENSG00000119977.22	ENST00000679984.1	2364	13	0	-16	0	0	multi-exon	FALSE	canonical	3	22	junction_9	142.866755132964	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAACTGGTTGAGAG	5	True	NA	39	True	NA	NA	NA	95693947	95663434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_95664301_95680471_95680610_95682650_95682805_95683100_95683181_95683521_95683630_95684498_95684625_95685555_95685637_95686494_95686531_95687043_95687160_95687591_95687720_95692919_95693039_95693352_95693477_95693643
H1_mix_00010387	chr10	-	3014	4	FSM	ENSG00000226688.8	ENST00000669283.1	2947	4	-67	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	15.8605030044938	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATTATTTATATTAATTA	30	True	NA	-97	True	NA	NA	NA	95907842	95873084	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_95875667_95876517_95876661_95904829_95904939_95907662
H1_mix_00010388	chr10	-	877	4	NIC	ENSG00000226688.8	novel	864	5	NA	NA	11	39	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	27.0472837001344	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTCAAGCTGGCTGCAG	1	True	NA	NA	False	AAGAAA	-20	NA	95907871	95875135	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_95875667_95876517_95876661_95904829_95904939_95907777
H1_mix_00010390	chr10	-	431	1	FSM	ENSG00000229417.1	ENST00000429734.1	854	1	-23	446	-23	-446	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATCTGGAAAGTGATCTG	NA	False	NA	NA	False	NA	NA	NA	96190242	96189811	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_96189800_96190200
H1_mix_00010391	chr10	-	1390	5	ISM	ENSG00000095587.9	ENST00000357947.4	6769	21	-6	63518	-6	-32933	5prime_fragment	FALSE	canonical	3	10	junction_1	4.02336923485777	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTCATGTTGGATCAAA	7794	False	NA	4	True	AATAAA	-29	NA	96513932	96428125	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_-_96428749_96432806_96432963_96446090_96446169_96480348_96480460_96513510
H1_mix_00010392	chr10	-	5406	12	NNC	ENSG00000077147.16	novel	6100	15	NA	NA	-7537	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_11	560.136066704457	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTTTGGATTCCTTATT	NA	False	NA	-4	True	AATAAA	-13	NA	96560480	96518109	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_96522331_96527212_96527290_96527412_96527497_96528030_96528178_96530539_96530609_96533050_96533191_96544075_96544207_96547894_96547990_96551244_96551412_96552927_96553060_96559658_96559737_96560415
H1_mix_00010393	chr10	-	6101	15	FSM	ENSG00000077147.16	ENST00000371142.9	6100	15	0	-1	0	1	multi-exon	FALSE	canonical	3	1521	junction_11	183.213157891266	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTGGATTCCTTATTT	-12	True	NA	-3	True	AATAAA	-14	NA	96587012	96518108	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_96522331_96527212_96527290_96527412_96527497_96528030_96528178_96530539_96530609_96533050_96533191_96544075_96544207_96547894_96547990_96551244_96551412_96552927_96553060_96559658_96559737_96561977_96562139_96565303_96565427_96576633_96576830_96586733
H1_mix_00010395	chr10	-	4803	17	FSM	ENSG00000155629.15	ENST00000339364.10	4800	17	0	-3	0	3	multi-exon	TRUE	canonical	2	8	junction_5	4.13634802694357	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGTCTCGTGAATGTGA	-1	True	NA	2	True	TATAAA	-40	NA	96720514	96593311	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_96595635_96602279_96602399_96603978_96604050_96609711_96609868_96616638_96616712_96620351_96620558_96623471_96623538_96626707_96626906_96628397_96628494_96645472_96645663_96648658_96648856_96651247_96651381_96651508_96651652_96652697_96652843_96656797_96656935_96709566_96709984_96720381
H1_mix_00010396	chr10	-	1878	15	FSM	ENSG00000269891.2	ENST00000479633.2	1876	15	0	-2	0	1	multi-exon	FALSE	canonical	0	0	junction_4	153.093342208508	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTCGTTGCTGTATTAT	3	True	NA	NA	False	AATAAA	-14	NA	97292637	97153043	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_97153222_97157817_97157890_97163379_97163452_97164818_97164891_97229146_97229226_97229763_97229875_97235216_97235316_97243967_97244160_97246271_97246338_97256317_97256405_97259401_97259629_97263419_97263630_97264825_97264907_97265859_97266126_97292571
H1_mix_00010397	chr10	-	5447	12	FSM	ENSG00000213390.11	ENST00000358531.9	5438	12	0	-9	0	3	multi-exon	FALSE	canonical	3	282	junction_2	36.1244405716071	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTGGTCTATTCACAT	3	True	NA	1	True	ATTAAA	-26	NA	97292637	97222169	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_97226133_97229146_97229226_97229763_97229875_97235216_97235316_97243967_97244160_97246271_97246338_97256317_97256405_97259401_97259629_97263419_97263630_97264825_97264907_97265859_97266126_97292571
H1_mix_00010399	chr10	-	601	5	FSM	ENSG00000213390.11	ENST00000466484.1	601	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	156.077504785283	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCACCCCATGTCCTGTGGC	5	True	NA	NA	False	AAGAAA	-45	NA	97292635	97259429	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_97259629_97263419_97263630_97264825_97264907_97266078_97266126_97292571
H1_mix_00010402	chr10	-	4740	34	FSM	ENSG00000052749.14	ENST00000370992.9	4396	34	0	-344	0	1	multi-exon	FALSE	canonical	3	231	junction_23	32.88609051704	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCGTGTCTTCCCACATT	-27	True	NA	NA	False	NA	NA	NA	97401340	97356356	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_97357197_97358536_97358620_97358942_97359011_97360545_97360619_97363853_97363904_97366107_97366234_97366445_97366622_97366741_97366910_97367040_97367133_97369424_97369583_97370166_97370275_97370454_97370561_97370715_97370797_97370922_97371082_97372072_97372167_97372735_97372804_97373045_97373201_97373574_97373738_97373829_97373895_97379292_97379415_97379627_97379771_97380798_97380914_97381385_97381484_97381714_97381827_97385165_97385258_97385894_97385994_97388251_97388380_97388488_97388625_97390422_97390540_97390738_97390845_97393683_97393761_97396217_97396302_97400304_97400535_97401092
H1_mix_00010403	chr10	-	1145	8	FSM	ENSG00000171311.13	ENST00000370902.8	1145	8	0	0	0	0	multi-exon	FALSE	canonical	3	494	junction_7	72.2173589850495	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGAGTTGGGTTGAAGTC	-4	True	NA	NA	False	NA	NA	NA	97446006	97435908	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_97436552_97437190_97437276_97437699_97437751_97438669_97438704_97441170_97441260_97443236_97443312_97445731_97445848_97445954
H1_mix_00010404	chr10	-	718	7	FSM	ENSG00000171311.13	ENST00000370885.8	718	7	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	229.138058820441	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAGGCACCAACAAACAAAA	9	True	NA	-32	True	AATAAA	-12	NA	97445993	97436247	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_97436552_97437190_97437276_97437699_97437751_97438669_97438704_97441170_97441260_97445731_97445848_97445954
H1_mix_00010405	chr10	-	564	6	FSM	ENSG00000171311.13	ENST00000485122.6	564	6	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	251.976506841412	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCAGTTTACGCTGTAG	17	True	NA	-117	True	NA	NA	NA	97445985	97436332	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_97436552_97438669_97438704_97441170_97441260_97443236_97443312_97445731_97445848_97445954
H1_mix_00010406	chr10	-	642	9	FSM	ENSG00000171311.13	ENST00000471049.5	642	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	312.364545643388	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCATCAGCTGGTGTGAG	29	False	NA	NA	False	NA	NA	NA	97445973	97436539	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_97436552_97437190_97437276_97437699_97437751_97438662_97438704_97441170_97441260_97443236_97443312_97445452_97445607_97445731_97445848_97445954
H1_mix_00010408	chr10	-	2131	2	FSM	ENSG00000171311.13	ENST00000489158.1	2113	2	0	-18	0	18	multi-exon	FALSE	canonical	3	494	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATAGTTGTATACCAAGA	-4	True	NA	NA	False	AGTAAA	-20	NA	97446006	97443768	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_97445848_97445954
H1_mix_00010411	chr10	-	2164	18	FSM	ENSG00000155229.21	ENST00000434538.5	2164	18	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	103.77117493507	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGCTGTCAGATATTTCC	43	False	NA	-28	True	AATAAA	-16	NA	97467525	97458323	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_97458720_97458799_97458901_97459222_97459283_97459361_97459506_97459658_97459742_97460045_97460233_97460694_97460752_97460906_97461008_97461495_97461623_97461827_97461897_97462016_97462120_97462582_97462683_97463857_97464014_97465804_97465955_97466058_97466160_97466503_97466586_97466775_97466902_97467504
H1_mix_00010414	chr10	-	3529	32	NIC	ENSG00000155229.21	novel	3532	32	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_31	96.1441750359338	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGCTGTCAGATATTTCC	52	False	NA	-28	True	AATAAA	-16	NA	97498758	97458323	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_97458720_97458799_97458901_97459222_97459283_97459361_97459527_97459658_97459742_97460045_97460233_97460694_97460752_97460906_97461008_97461495_97461623_97461827_97461897_97462016_97462120_97462582_97462683_97463857_97464014_97465804_97465955_97466058_97466157_97466503_97466586_97466775_97466902_97467504_97467584_97468251_97468407_97468965_97469105_97469645_97469724_97470128_97470204_97470774_97470862_97476682_97476745_97476834_97476964_97477346_97477417_97477854_97477930_97478303_97478390_97480941_97481043_97484102_97484152_97498272_97498393_97498695
H1_mix_00010419	chr10	-	2225	4	NIC	ENSG00000171160.18	novel	2333	5	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	3	37	junction_3	77.8588466392869	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATACCTAGTTTTCCTGA	7	True	NA	-19	True	AATAAA	-17	NA	97633491	97614556	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_97616412_97616677_97616788_97617207_97617323_97633346
H1_mix_00010420	chr10	-	419	2	FSM	ENSG00000171160.18	ENST00000370635.3	419	2	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTTAATTCAACCTCCA	7	True	NA	-19	True	AATAAA	-16	NA	97633491	97619409	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_97619684_97633346
H1_mix_00010421	chr10	-	1379	3	FSM	ENSG00000119986.7	ENST00000370626.4	1375	3	0	-4	0	4	multi-exon	FALSE	canonical	3	33	junction_2	18	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGAGTCTGTCACAGAA	-12	True	NA	2	True	AATAAA	-19	NA	97687241	97677419	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_97678026_97679618_97679916_97686765
H1_mix_00010422	chr10	-	1405	3	NNC	ENSG00000119986.7	novel	1375	3	NA	NA	-28	4	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_2	6	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGAGTCTGTCACAGAA	3	True	NA	2	True	AATAAA	-19	NA	97687269	97677419	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_97678026_97679618_97679914_97686765
H1_mix_00010425	chr10	-	3703	20	FSM	ENSG00000107521.20	ENST00000325103.10	3703	20	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_12	86.203489205754	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAGCAGAGATGCTCACA	-4	True	NA	-4	True	AATAAA	-30	NA	98446926	98416197	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_98417727_98418174_98418258_98420044_98420159_98422368_98422514_98423602_98423669_98423752_98423888_98424312_98424375_98425540_98425721_98425817_98425986_98427214_98427265_98429572_98429643_98429790_98429890_98430570_98430671_98431130_98431292_98433982_98434092_98435271_98435415_98435634_98435773_98443123_98443241_98445299_98445414_98446806
H1_mix_00010428	chr10	-	3583	19	NIC	ENSG00000107521.20	novel	3703	20	NA	NA	3	-5	combination_of_known_junctions	FALSE	canonical	3	88	junction_11	86.0316479235662	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATCTTAGCAGAGATGC	12	True	NA	-9	True	AATAAA	-25	NA	98446910	98416202	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_98417727_98418174_98418258_98420044_98420159_98422368_98422514_98423602_98423669_98423752_98423888_98424312_98424375_98425540_98425721_98425817_98425986_98427214_98427265_98429572_98429643_98430570_98430671_98431130_98431292_98433982_98434092_98435271_98435415_98435634_98435773_98443123_98443241_98445299_98445414_98446806
H1_mix_00010430	chr10	-	1498	9	NIC	ENSG00000107521.20	novel	1580	10	NA	NA	3	7	combination_of_known_junctions	FALSE	canonical	3	88	junction_1	103.943193620362	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGAGGTGTGGTGGCTC	-1	True	NA	NA	False	AATAAA	-23	NA	98446923	98429143	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_98429643_98430570_98430671_98431130_98431292_98433982_98434092_98435271_98435415_98435634_98435773_98443123_98443241_98445299_98445414_98446806
H1_mix_00010431	chr10	-	1587	10	FSM	ENSG00000107521.20	ENST00000338546.9	1580	10	0	-7	0	7	multi-exon	FALSE	canonical	3	77	junction_2	108.331794860871	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGAGGTGTGGTGGCTC	9	True	NA	NA	False	AATAAA	-23	NA	98446913	98429143	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_98429643_98429790_98429890_98430570_98430671_98431130_98431292_98433982_98434092_98435271_98435415_98435634_98435773_98443123_98443241_98445299_98445414_98446806
H1_mix_00010432	chr10	-	1216	8	NIC	ENSG00000107521.20	novel	2791	19	NA	NA	0	-102	combination_of_known_junctions	FALSE	canonical	3	19	junction_2	133.133353431506	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATAATCATCTAATTTCT	49	False	NA	-9	True	ATTAAA	-23	NA	98446873	98429257	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_98429643_98430570_98430671_98433939_98434092_98435271_98435415_98435634_98435773_98443123_98443241_98445299_98445414_98446806
H1_mix_00010437	chr10	-	3764	9	FSM	ENSG00000014919.13	ENST00000370483.9	2788	9	0	-976	0	0	multi-exon	FALSE	canonical	3	46	junction_1	65.9014415623816	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTCAACCTAGAATTTTT	7	True	NA	NA	False	ATTAAA	-18	NA	99732100	99710867	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_99713480_99716347_99716462_99718345_99718501_99720986_99721069_99723955_99724124_99726967_99727155_99727440_99727564_99729552_99729735_99731959
H1_mix_00010438	chr10	-	5030	9	FSM	ENSG00000014919.13	ENST00000016171.6	5030	9	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_3	27.1247119800377	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTCAACCTAGAATTTTT	-20	True	NA	NA	False	ATTAAA	-18	NA	99732127	99710867	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_99714719_99716347_99716462_99718345_99718501_99720986_99721069_99723955_99724124_99726967_99727155_99727440_99727564_99729552_99729735_99731959
H1_mix_00010443	chr10	-	6562	18	NNC	ENSG00000107554.17	novel	6428	17	NA	NA	-51	1	intron_retention	FALSE	canonical	3	14	junction_17	56.9942023397645	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGATGTTTTCTTGATTTC	NA	False	NA	-4	True	AATAAA	-17	NA	100009998	99875575	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_99877337_99879810_99880362_99884010_99884210_99885686_99885867_99886299_99886633_99888824_99888954_99894945_99895051_99896266_99896398_99898085_99898286_99898742_99898761_99899918_99900067_99907994_99908095_99908952_99909147_99955213_99957206_99969114_99969238_99971979_99972135_100002941_100003024_100009837
H1_mix_00010445	chr10	-	3186	13	NNC	ENSG00000107566.14	novel	1453	12	NA	NA	0	34331	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	120.671356953044	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGCCGGGCTTGGTGGCC	-3	True	NA	NA	False	ACTAAA	-31	NA	100186029	100115762	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_100115789_100150096_100152353_100154859_100154940_100156144_100156235_100164003_100164096_100167347_100167407_100174207_100174282_100175944_100176071_100178132_100178195_100179200_100179248_100183755_100183838_100185513_100185638_100185961
H1_mix_00010446	chr10	-	3218	12	NIC	ENSG00000107566.14	novel	962	11	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	141	junction_11	84.1162124092772	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGATTTGTGTTTTTTT	-3	True	NA	-7	True	AATAAA	-13	NA	100186029	100150096	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_100152353_100154859_100154940_100156144_100156235_100164003_100164096_100167347_100167407_100174207_100174282_100175944_100176071_100178132_100178195_100179200_100179248_100183755_100183838_100185513_100185638_100185903
H1_mix_00010447	chr10	-	3487	11	FSM	ENSG00000107566.14	ENST00000421367.7	3487	11	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_3	54.9535258195505	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATTTGTGTTTTTTTTTC	-3	True	NA	-4	True	AATAAA	-16	NA	100186029	100150093	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_100152353_100154859_100154940_100156144_100156235_100164003_100164096_100167347_100167407_100174207_100174282_100175944_100176071_100178132_100178195_100179200_100179248_100183755_100183838_100185513
H1_mix_00010449	chr10	-	962	11	FSM	ENSG00000107566.14	ENST00000370408.2	962	11	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_10	87.7630901917201	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTGGCTCCCTGGCCAC	-3	True	NA	NA	False	NA	NA	NA	100186029	100154859	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_100154940_100156144_100156235_100164003_100164096_100167347_100167407_100174207_100174282_100175944_100176071_100178132_100178195_100179200_100179248_100183755_100183838_100185513_100185638_100185903
H1_mix_00010450	chr10	-	3613	21	FSM	ENSG00000213341.11	ENST00000370397.8	3600	21	0	-13	0	13	multi-exon	FALSE	canonical	3	140	junction_2	18.8663722002933	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGTGGAATTAAGAGCAT	-12	True	NA	79	True	AATAAA	-38	NA	100229596	100188286	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_100189628_100190868_100190969_100193297_100193432_100193983_100194132_100194424_100194522_100199970_100200021_100200670_100200781_100202087_100202150_100204505_100204658_100205075_100205200_100207229_100207333_100209594_100209790_100217994_100218131_100218717_100218826_100219007_100219133_100219269_100219360_100220587_100220677_100222111_100222182_100222865_100222981_100225922_100226018_100229427
H1_mix_00010452	chr10	-	3504	21	NNC	ENSG00000213341.11	novel	3600	21	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	37.8013227281798	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTTGATCTCTATTCAT	0	True	NA	-1	True	ATTAAA	-15	NA	100229584	100188366	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_100189628_100190868_100190969_100193314_100193432_100193983_100194132_100194424_100194522_100199970_100200021_100200670_100200781_100202087_100202150_100204505_100204658_100205075_100205200_100207229_100207333_100209594_100209790_100217994_100218131_100218717_100218826_100219007_100219133_100219269_100219360_100220587_100220677_100222111_100222182_100222865_100222981_100225922_100226018_100229427
H1_mix_00010459	chr10	-	2688	5	FSM	ENSG00000196072.12	ENST00000614731.4	2634	5	21	-75	0	75	multi-exon	FALSE	canonical	0	0	junction_4	255.035291675486	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACATTAGCTATAGTTAC	-4	True	NA	NA	False	AATAGA	-1	NA	100286357	100273204	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_100275494_100280123_100280229_100280933_100281054_100286096_100286214_100286300
H1_mix_00010460	chr10	-	2700	5	FSM	ENSG00000196072.12	ENST00000370372.7	2619	5	7	-88	0	75	multi-exon	FALSE	canonical	3	564	junction_1	15.0062486984589	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACATTAGCTATAGTTAC	11	True	NA	NA	False	AATAGA	-1	NA	100286673	100273204	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_100275494_100280123_100280229_100280933_100281054_100286096_100286214_100286604
H1_mix_00010461	chr10	-	2024	4	FSM	ENSG00000196072.12	ENST00000441611.5	2024	4	0	0	0	0	multi-exon	FALSE	canonical	3	564	junction_1	16.9705627484771	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAACAAAAGAATT	-4	True	NA	NA	False	TTTAAA	-11	NA	100286357	100273955	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_100275494_100280123_100280229_100280933_100281054_100286096
H1_mix_00010462	chr10	-	538	5	FSM	ENSG00000255339.6	ENST00000528174.5	538	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	1333.03610228681	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGAGTCCTTTCTGCCTTG	-7	True	NA	NA	False	NA	NA	NA	100529877	100516120	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_100516220_100516873_100516961_100526974_100527075_100529365_100529507_100529766
H1_mix_00010464	chr10	-	693	5	FSM	ENSG00000166136.16	ENST00000299166.9	678	5	0	-15	0	15	multi-exon	FALSE	canonical	3	2763	junction_1	340.019117109612	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGGAATAGTCACTGCCT	-1	True	NA	-6	True	AATAAA	-32	NA	100529871	100523724	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_100523930_100526398_100526555_100526974_100527075_100529379_100529507_100529766
H1_mix_00010466	chr10	-	829	4	FSM	ENSG00000166136.16	ENST00000466088.5	829	4	0	0	0	0	multi-exon	FALSE	canonical	3	3143	junction_1	264.670864786184	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCCTTTGTTGGACTTGT	8	True	NA	NA	False	NA	NA	NA	100529862	100526048	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_100526555_100526974_100527075_100529379_100529507_100529766
H1_mix_00010468	chr10	-	727	6	FSM	ENSG00000055950.17	ENST00000448244.5	727	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	223.161466207766	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGCCAGGCTCTGTGT	49	False	NA	-8	True	AGTAAA	-18	NA	100987433	100981375	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_100981544_100983754_100983818_100984033_100984075_100986748_100986976_100987089_100987197_100987312
H1_mix_00010469	chr10	-	747	5	FSM	ENSG00000055950.17	ENST00000299179.9	747	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	209.58590124338	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGCCAGGCTCTGTGT	-12	True	NA	-8	True	AGTAAA	-18	NA	100987494	100981375	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_100981544_100983754_100983818_100986748_100986976_100987089_100987197_100987312
H1_mix_00010470	chr10	-	895	6	FSM	ENSG00000055950.17	ENST00000342071.5	894	6	0	-1	0	0	multi-exon	FALSE	canonical	3	28	junction_3	217.448476655966	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGCCAGGCTCTGTGT	-33	True	NA	-8	True	AGTAAA	-18	NA	100987515	100981375	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_100981544_100983754_100983818_100983947_100984075_100986748_100986976_100987089_100987197_100987312
H1_mix_00010471	chr10	-	1217	4	FSM	ENSG00000055950.17	ENST00000370236.5	866	4	50	-401	0	396	multi-exon	FALSE	canonical	3	19	junction_1	222.366564233225	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCTTGAACTGTTGTCA	49	False	NA	NA	False	AATGAA	-20	NA	100987433	100985872	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_100986573_100986686_100986976_100987089_100987197_100987312
H1_mix_00010472	chr10	-	913	2	FSM	ENSG00000055950.17	ENST00000493646.1	897	2	16	-32	0	25	multi-exon	FALSE	canonical	3	470	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTAAGCACAAGCCTCAGT	1	True	NA	-6	True	NA	NA	NA	100987270	100986243	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_100986976_100987089
H1_mix_00010473	chr10	-	804	4	FSM	ENSG00000055950.17	ENST00000370234.4	798	4	0	-6	0	0	multi-exon	FALSE	canonical	2	12	junction_1	225.658050057062	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGGTCTGTCTTCAAAA	-1	True	NA	-36	True	AATAAA	-17	NA	100987483	100986273	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_100986573_100986748_100986976_100987089_100987197_100987312
H1_mix_00010474	chr10	-	1012	3	FSM	ENSG00000055950.17	ENST00000318364.13	999	3	-18	5	0	0	multi-exon	FALSE	canonical	3	470	junction_1	19.5	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGGTCTGTCTTCAAAA	-33	True	NA	-36	True	AATAAA	-17	NA	100987515	100986273	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_100986976_100987089_100987197_100987312
H1_mix_00010475	chr10	-	905	2	FSM	ENSG00000055950.17	ENST00000477279.1	903	2	0	-2	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGGTCTGTCTTCAAAA	-33	True	NA	-36	True	AATAAA	-17	NA	100987515	100986273	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_100986976_100987312
H1_mix_00010479	chr10	-	1536	3	FSM	ENSG00000166169.17	ENST00000370168.7	1536	3	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	4.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGTGTCTGAGCTG	5013	False	NA	-5	True	AGTAAA	-18	NA	101583193	101578881	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_101579818_101580247_101580417_101582762
H1_mix_00010481	chr10	-	2670	9	FSM	ENSG00000166169.17	ENST00000299206.8	2670	9	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_8	20.3803673911929	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGTGTCTGAGCTG	-3	True	NA	-5	True	AGTAAA	-18	NA	101588209	101578881	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_101579818_101580247_101580417_101582762_101582892_101583507_101583682_101584601_101584920_101585315_101585479_101585861_101586157_101587245_101587407_101587884
H1_mix_00010482	chr10	-	1942	6	FSM	ENSG00000166169.17	ENST00000628479.2	1953	6	13	-2	0	0	multi-exon	FALSE	canonical	3	7	junction_4	33.9234432214656	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGTGTCTGAGCTG	-51	True	NA	-5	True	AGTAAA	-18	NA	101588257	101578881	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_101579818_101580247_101580417_101582762_101582892_101583507_101583682_101587245_101587407_101587884
H1_mix_00010483	chr10	-	2781	9	FSM	ENSG00000166169.17	ENST00000370162.8	2781	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	25.4054620111503	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGTGTCTGAGCTG	-51	True	NA	-5	True	AGTAAA	-18	NA	101588257	101578881	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_101579818_101580247_101580417_101582762_101582892_101583507_101583682_101584601_101584920_101585315_101585479_101585861_101586157_101587245_101587407_101587821
H1_mix_00010485	chr10	-	2485	9	FSM	ENSG00000107829.15	ENST00000664783.1	2482	9	0	-3	0	0	multi-exon	FALSE	canonical	0	0	junction_7	30.6693556339223	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTCCTCACTGGCTGA	NA	False	NA	-2	True	AATAAA	-18	NA	101695259	101610663	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_101611411_101611627_101611770_101612336_101612478_101624744_101624811_101667885_101667981_101672914_101673048_101673487_101673674_101676340_101676437_101694380
H1_mix_00010486	chr10	-	694	5	FSM	ENSG00000107831.14	ENST00000346714.7	694	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	6.80073525436772	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGCCCTCCCCACAATG	7430	False	NA	NA	False	NA	NA	NA	101775974	101770323	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_101770620_101771462_101771570_101774731_101774880_101775739_101775777_101775868
H1_mix_00010488	chr10	-	879	6	FSM	ENSG00000107833.10	ENST00000370110.5	877	6	0	-2	0	2	multi-exon	FALSE	canonical	3	39	junction_5	4.42718872423573	177	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTGGCTTCTTCCTG	-9	True	NA	-5	True	AATAAA	-22	NA	101783413	101781322	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_101781633_101781726_101781855_101782257_101782352_101782477_101782598_101782838_101782925_101783272
H1_mix_00010489	chr10	-	5528	13	ISM	ENSG00000198408.14	ENST00000361464.8	5174	16	7012	-7	6434	0	3prime_fragment	FALSE	canonical	3	614	junction_2	272.234108300599	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTTGTATTGTGTGAATC	7010	False	NA	-6	True	AATAAA	-20	NA	101811432	101784442	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_-_101786588_101787363_101787524_101790895_101791089_101791353_101791440_101792838_101792944_101793912_101793999_101797979_101798155_101798841_101799456_101800241_101800401_101803734_101804020_101806044_101806144_101807729_101807902_101810183
H1_mix_00010492	chr10	-	3569	2	FSM	ENSG00000198408.14	ENST00000462994.1	1088	2	-832	-1649	-832	-3	multi-exon	FALSE	canonical	3	803	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCTTGTCGTGTTGTAT	898	False	NA	-16	True	AATAAA	-10	NA	101788797	101784452	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_101786588_101787363
H1_mix_00010499	chr10	-	4099	26	FSM	ENSG00000120029.13	ENST00000370033.9	4099	26	0	0	0	0	multi-exon	TRUE	canonical	3	70	junction_5	19.9798298291052	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTGTTGCTTTTTTTTT	-17	True	NA	-3	True	ATTAAA	-23	NA	102056173	101845598	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_101847621_101849775_101849893_101889411_101889491_101939862_101939939_101956596_101956724_101957649_101957733_101975211_101975301_101990550_101990612_101991968_101992039_101993537_101993604_101995296_101995356_102001970_102002073_102006539_102006634_102009373_102009450_102009976_102010024_102011722_102011784_102012832_102012877_102013967_102014025_102023476_102023564_102023674_102023750_102025155_102025249_102029637_102029746_102033025_102033173_102033282_102033340_102040012_102040126_102056084
H1_mix_00010500	chr10	-	724	5	FSM	ENSG00000120029.13	ENST00000311122.5	724	5	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_4	16.0526477566786	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAATGGAGGTATTCTTT	-37	True	NA	-4	True	AATAAA	-20	NA	102056193	102029447	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_102029746_102033025_102033173_102033282_102033340_102040012_102040126_102056084
H1_mix_00010501	chr10	-	4064	10	NIC	ENSG00000198728.11	novel	2285	11	NA	NA	0	3	intron_retention	FALSE	canonical	3	28	junction_9	58.925565098879	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGGTTGGTCATTGAT	0	True	NA	-4	True	AATAAA	-21	NA	102114946	102106485	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_102109178_102109383_102109508_102109599_102109684_102109920_102110044_102110528_102110702_102110868_102110972_102111068_102111145_102111255_102111301_102111433_102111537_102114405
H1_mix_00010502	chr10	-	3590	11	FSM	ENSG00000198728.11	ENST00000673968.1	3098	11	-489	-3	-489	3	multi-exon	FALSE	canonical	3	71	junction_1	44.1235764642895	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGGTTGGTCATTGAT	570	False	NA	-4	True	AATAAA	-21	NA	102120857	102106485	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_102108324_102109028_102109178_102109383_102109508_102109599_102109684_102109920_102110044_102110528_102110702_102110868_102110972_102111068_102111145_102111255_102111301_102111433_102111537_102120085
H1_mix_00010503	chr10	-	3360	11	FSM	ENSG00000198728.11	ENST00000361198.9	2285	11	0	-1075	0	4	multi-exon	FALSE	canonical	3	28	junction_10	66.0608810113822	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGGTTGGTCATTGATG	0	True	NA	-3	True	AATAAA	-22	NA	102114946	102106484	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_102108324_102109028_102109178_102109383_102109508_102109599_102109684_102109920_102110044_102110528_102110702_102110868_102110972_102111068_102111145_102111255_102111301_102111433_102111537_102114405
H1_mix_00010504	chr10	-	1938	11	FSM	ENSG00000198728.11	ENST00000425280.2	1938	11	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	48.2435487915224	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCATGTCCCCCCCTCT	-6	True	NA	-2	True	ATTAAA	-21	NA	102120285	102107559	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_102108324_102109034_102109178_102109383_102109508_102109599_102109684_102109920_102110044_102110528_102110702_102110868_102110972_102111068_102111145_102111255_102111301_102111433_102111537_102120085
H1_mix_00010508	chr10	-	896	3	FSM	ENSG00000107874.11	ENST00000465409.1	896	3	0	0	0	0	multi-exon	FALSE	canonical	3	643	junction_2	13	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCATTCTGGTCATTT	8361	False	NA	-4	True	AGTAAA	-19	NA	102424304	102423244	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_102423573_102423656_102423718_102423797
H1_mix_00010510	chr10	-	3491	4	FSM	ENSG00000138107.13	ENST00000470322.5	3519	4	29	-1	29	0	multi-exon	FALSE	canonical	3	735	junction_1	61.7215971565509	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCCTCTATCTGTCTG	560	False	NA	-11	True	AATAAA	-22	NA	102483651	102479228	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_102480966_102481131_102481173_102481836_102481899_102482000
H1_mix_00010511	chr10	-	2830	11	FSM	ENSG00000138107.13	ENST00000369905.9	2830	11	0	0	0	0	multi-exon	FALSE	canonical	3	735	junction_1	53.0456407256996	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCCTCTATCTGTCTG	5	True	NA	-11	True	AATAAA	-22	NA	102502712	102479228	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_102480966_102481131_102481173_102481836_102481899_102482000_102482176_102483010_102483104_102484159_102484377_102485608_102485734_102488149_102488276_102489062_102489139_102490548_102490614_102502599
H1_mix_00010514	chr10	-	3838	6	FSM	ENSG00000138175.9	ENST00000260746.6	3834	6	0	-4	0	4	multi-exon	FALSE	canonical	3	1081	junction_5	148.070253596055	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGAATGTGTTGTGTTC	14	True	NA	-6	True	AATAAA	-21	NA	102714397	102673726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_102676942_102685815_102686002_102689892_102689944_102699372_102699490_102705345_102705490_102714272
H1_mix_00010516	chr10	-	3545	19	FSM	ENSG00000076685.19	ENST00000404739.8	3525	19	0	-20	0	0	multi-exon	FALSE	canonical	3	100	junction_17	92.3316118304553	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATGGTGTTACATAGGC	6	True	NA	11	True	AATAAA	-35	NA	103193272	103088017	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_103089909_103090610_103090788_103090935_103090997_103091563_103091616_103093138_103093310_103093971_103094039_103094347_103094456_103095938_103095981_103097290_103097375_103098930_103098985_103099925_103100020_103101044_103101103_103101234_103101327_103105705_103105802_103106588_103106707_103139405_103139480_103174857_103174983_103181184_103181329_103193235
H1_mix_00010517	chr10	-	3435	18	FSM	ENSG00000076685.19	ENST00000343289.9	3435	18	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_17	56.5892747856097	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATGGTGTTACATAGGC	3951	False	NA	11	True	AATAAA	-35	NA	103193306	103088017	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_103089909_103090610_103090788_103090935_103090997_103091563_103091616_103093138_103093310_103093971_103094039_103094347_103094456_103095938_103095981_103097290_103097375_103098930_103098985_103099925_103100020_103101044_103101103_103101234_103101327_103105705_103105802_103106588_103106707_103139405_103139480_103174857_103174983_103193235
H1_mix_00010518	chr10	-	3465	19	NNC	ENSG00000076685.19	novel	3525	19	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_17	108.923761422699	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTTCTAACATGATTATA	19	True	NA	-8	True	AATAAA	-16	NA	103193259	103088036	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_103089909_103090610_103090788_103090935_103090997_103091563_103091616_103093138_103093310_103093971_103094039_103094347_103094456_103095938_103095981_103097290_103097375_103098930_103098985_103099925_103100020_103101044_103101103_103101234_103101327_103105705_103105802_103106588_103106707_103139405_103139480_103174857_103174983_103181232_103181329_103193235
H1_mix_00010519	chr10	-	3503	19	NNC	ENSG00000076685.19	novel	3525	19	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	3	111	junction_17	90.6268294834495	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTTCTAACATGATTATA	-17	True	NA	-8	True	AATAAA	-16	NA	103193295	103088036	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_103089909_103090610_103090788_103090935_103090997_103091563_103091616_103093138_103093310_103093971_103094039_103094347_103094456_103095938_103095981_103097290_103097375_103098930_103098985_103099925_103100020_103101044_103101103_103101234_103101327_103105705_103105802_103106588_103106707_103139405_103139480_103174857_103174983_103181230_103181329_103193235
H1_mix_00010524	chr10	-	1351	9	NNC	ENSG00000076685.19	novel	3449	19	NA	NA	6	-348	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	144.577617562332	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGCCTTTTAGCTTCCA	23	True	NA	NA	False	AATAAA	-21	NA	103193255	103100273	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_103100944_103101044_103101103_103101234_103101327_103105705_103105802_103106588_103106707_103139405_103139480_103174857_103174983_103181230_103181329_103193235
H1_mix_00010526	chr10	-	429	3	FSM	ENSG00000076685.19	ENST00000467380.1	427	3	0	-2	0	2	multi-exon	FALSE	canonical	3	9	junction_1	45.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTGTATATGTATA	NA	False	NA	NA	False	AATAAA	-43	NA	103181320	103169281	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_103169450_103174857_103174983_103181184
H1_mix_00010527	chr10	-	2170	9	NIC	ENSG00000156374.16	novel	2236	10	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_3	55.1485210590456	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGAATGTTAGTGTTTA	-1	True	NA	0	True	AATAAA	-17	NA	103351102	103302795	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_103303962_103314185_103314273_103326533_103326633_103345023_103345133_103347237_103347298_103347394_103347451_103348715_103348813_103348899_103349000_103350706
H1_mix_00010528	chr10	-	1950	7	FSM	ENSG00000156374.16	ENST00000337211.8	1950	7	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	66.9271992541149	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGAATGTTAGTGTTTA	22	True	NA	0	True	AATAAA	-17	NA	103351079	103302795	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_103303962_103314185_103314273_103326533_103326633_103333924_103333953_103348715_103348813_103348899_103349000_103350706
H1_mix_00010529	chr10	-	2236	10	FSM	ENSG00000156374.16	ENST00000369847.4	2236	10	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_3	24.5029602645965	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGAATGTTAGTGTTTA	5	True	NA	0	True	AATAAA	-17	NA	103351140	103302795	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_103303962_103314185_103314273_103326533_103326633_103333924_103333953_103345023_103345133_103347237_103347298_103347394_103347451_103348715_103348813_103348899_103349000_103350706
H1_mix_00010530	chr10	-	403	5	NNC	ENSG00000173915.16	novel	660	5	NA	NA	0	22807	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2564.20772364487	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATTTTGCAATGTGCTT	-9	True	NA	NA	False	NA	NA	NA	103396475	103366233	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_103366264_103389049_103389167_103392190_103392284_103392370_103392467_103396408
H1_mix_00010531	chr10	-	882	6	FSM	ENSG00000173915.16	ENST00000369825.6	882	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	2943.7000118898	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTATTTACAAGATATCAA	NA	False	NA	7	True	AATAAA	-26	NA	103396492	103389040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_103389167_103392190_103392284_103392370_103392467_103394198_103394395_103395745_103396033_103396408
H1_mix_00010532	chr10	-	364	4	FSM	ENSG00000173915.16	ENST00000309579.7	364	4	0	0	0	0	multi-exon	FALSE	canonical	3	5119	junction_3	515.528423615571	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCTTTATTTACA	0	True	NA	-2	True	AATAAA	-17	NA	103396466	103389049	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_103389167_103392190_103392284_103392370_103392467_103396408
H1_mix_00010534	chr10	-	660	5	FSM	ENSG00000173915.16	ENST00000369815.6	660	5	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_4	2912.36899919979	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCTTTATTTACA	-9	True	NA	-2	True	AATAAA	-17	NA	103396475	103389049	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_103389167_103392190_103392284_103392370_103392467_103395745_103396033_103396408
H1_mix_00010536	chr10	-	584	2	FSM	ENSG00000138172.11	ENST00000474797.1	895	2	311	0	295	0	multi-exon	FALSE	canonical	2	4	junction_1	0	365	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACCTAAGCATTTGAGGC	7622	False	NA	NA	False	NA	NA	NA	103451277	103450411	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_103450801_103451082
H1_mix_00010537	chr10	-	10744	8	NIC	ENSG00000107957.17	novel	5504	12	NA	NA	486	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	9.89124535606501	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGAATCACCTCTTAATTC	7	True	NA	-4	True	AATAAA	-22	NA	103693137	103594027	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_103603790_103605797_103605918_103611580_103611631_103612852_103613191_103617196_103617315_103627088_103627203_103660982_103661115_103693027
H1_mix_00010538	chr10	-	11349	8	ISM	ENSG00000107957.17	ENST00000420222.2	3039	9	-40	-7748	-40	0	intron_retention	FALSE	canonical	3	11	junction_5	6.80036013452109	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGAATCACCTCTTAATTCT	-5	True	NA	-3	True	AATAAA	-23	NA	103661744	103594026	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_-_103603790_103605797_103605918_103611580_103611631_103612852_103613191_103617196_103617315_103622469_103622554_103627088_103627203_103660982
H1_mix_00010539	chr10	-	6371	10	FSM	ENSG00000107960.11	ENST00000224950.8	6369	10	0	-2	0	2	multi-exon	FALSE	canonical	3	120	junction_3	10.6504506367305	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCAAAAGGTTCTGTGTT	-2	True	NA	-5	True	AATAAA	-22	NA	103918184	103877566	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_103882842_103889071_103889145_103892129_103892253_103897547_103897720_103898876_103899001_103900061_103900224_103905090_103905157_103910526_103910623_103917461_103917657_103918099
H1_mix_00010541	chr10	-	1414	11	FSM	ENSG00000107960.11	ENST00000466828.5	1414	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	49.8438561911094	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATCTTGGGAATGGGATT	52	True	NA	-54	True	AATAAA	-13	NA	103918130	103882554	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_103882842_103889071_103889145_103892129_103892253_103897547_103897720_103898292_103898378_103898876_103899001_103900061_103900224_103905090_103905157_103910526_103910623_103917461_103917657_103918099
H1_mix_00010542	chr10	-	437	1	FSM	ENSG00000266754.2	ENST00000581152.2	300	1	35	-172	35	172	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGCGCCCGGCCAAGATGA	NA	False	NA	NA	False	NA	NA	NA	103974779	103974342	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_103974300_103974800
H1_mix_00010543	chr10	-	1387	8	FSM	ENSG00000197748.13	ENST00000369719.2	1434	8	0	47	0	-47	multi-exon	FALSE	canonical	2	2	junction_1	3.0572763655761	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAGGGCAAGGAGTGAAT	0	True	NA	NA	False	NA	NA	NA	104232340	104203476	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_104203804_104205962_104206034_104207664_104207825_104212006_104212158_104214258_104214427_104225460_104225558_104230589_104230844_104232181
H1_mix_00010547	chr10	-	9598	26	NIC	ENSG00000108018.16	novel	7444	26	NA	NA	-529	-63	intron_retention	FALSE	canonical	3	45	junction_4	9.71184843374319	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGAATTCTACCTGCATT	27	False	NA	NA	False	NA	NA	NA	107165235	106573733	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_106579252_106579368_106579475_106597350_106597451_106607165_106607298_106611910_106612024_106618148_106618273_106620427_106620562_106629201_106629389_106652381_106652554_106667688_106667803_106671236_106671368_106672867_106672986_106675048_106675157_106677312_106677405_106679255_106679333_106679631_106679735_106688191_106688339_106699213_106699394_106706544_106706635_106709222_106709342_106730049_106730115_106761587_106761662_106776533_106776693_106829573_106829674_106956512_106956581_107163968
H1_mix_00010549	chr10	-	4384	17	FSM	ENSG00000108039.18	ENST00000488118.6	4384	17	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_15	63.0791912995086	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTTAGCTGTCTCTT	-16	True	NA	-5	True	AATAAA	-16	NA	109915075	109864765	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_109865313_109868613_109868713_109869952_109870030_109870730_109870905_109871791_109871862_109873366_109873428_109875527_109877868_109877999_109878059_109880187_109880239_109880841_109880932_109882431_109882643_109884066_109884149_109886245_109886342_109888048_109888193_109888502_109888596_109907690_109907816_109915010
H1_mix_00010550	chr10	-	2497	21	FSM	ENSG00000108039.18	ENST00000502935.6	2497	21	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_8	24.6777227474498	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTTAGCTGTCTCTT	-39	True	NA	-5	True	AATAAA	-16	NA	109923511	109864765	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_109865313_109868613_109868713_109869952_109870030_109870730_109870905_109871791_109871862_109873366_109873428_109875527_109875600_109877789_109877868_109877999_109878059_109880187_109880239_109880841_109880932_109882431_109882643_109884066_109884149_109886245_109886342_109888048_109888193_109888502_109888596_109891721_109891827_109893011_109893076_109907690_109907816_109915010_109915100_109923401
H1_mix_00010554	chr10	-	4418	6	FSM	ENSG00000119953.14	ENST00000369603.10	4310	6	0	-108	0	108	multi-exon	FALSE	canonical	3	169	junction_4	15.7098695093244	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATCTAGGATTTTTGAGT	23	True	NA	NA	False	AGTAAA	-14	NA	110304920	110290621	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_110294288_110295227_110295382_110297566_110297729_110298647_110298791_110303467_110303588_110304747
H1_mix_00010555	chr10	-	1275	2	FSM	ENSG00000273143.2	ENST00000607952.1	209	2	-386	-680	0	680	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCCAGTGGGACAGGTGG	4774	False	NA	NA	False	NA	NA	NA	110496590	110474423	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_110475227_110496118
H1_mix_00010557	chr10	-	4283	1	FSM	ENSG00000214413.9	ENST00000605265.1	4712	1	445	-16	445	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGAAATTTGTATTGTGAA	NA	False	NA	-1	True	AATAAA	-40	NA	110904500	110900217	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_110900200_110904500
H1_mix_00010561	chr10	-	6372	22	FSM	ENSG00000119927.14	ENST00000348367.9	6372	22	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	8.26872916996123	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGATGTGTTTGATTTG	-32	True	NA	-1	True	AATAAA	-17	NA	112183765	112149864	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_112153667_112154628_112154688_112155863_112156054_112157248_112157390_112158315_112158394_112159910_112160054_112160603_112160869_112161666_112161738_112163700_112163817_112164524_112164611_112166401_112166516_112168311_112168525_112168852_112168953_112172181_112172319_112172969_112173067_112173698_112173846_112175599_112175714_112177983_112178058_112180472_112180596_112181682_112181814_112182793_112182892_112183692
H1_mix_00010562	chr10	-	6148	22	NNC	ENSG00000119927.14	novel	6372	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	19.9902470551082	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGATGTGTTTGATTTG	23	True	NA	-1	True	AATAAA	-17	NA	112183710	112149864	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_112153498_112154628_112154688_112155863_112156054_112157248_112157390_112158315_112158394_112159910_112160054_112160603_112160869_112161666_112161738_112163700_112163817_112164524_112164611_112166401_112166516_112168311_112168525_112168852_112168953_112172181_112172319_112172969_112173067_112173698_112173846_112175599_112175714_112177983_112178058_112180472_112180596_112181682_112181814_112182793_112182892_112183692
H1_mix_00010564	chr10	-	3221	10	FSM	ENSG00000023041.12	ENST00000682182.1	3216	10	3	-8	0	3	multi-exon	FALSE	canonical	3	125	junction_5	31.9652589192983	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTACTTAAAGCATTTT	-1	True	NA	-10	True	AATAAA	-26	NA	112446947	112430296	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112434465_112438335_112438390_112440533_112440696_112442191_112442352_112443514_112443607_112445169_112445651_112446704
H1_mix_00010566	chr10	-	3991	10	FSM	ENSG00000023041.12	ENST00000683491.1	3983	10	0	-8	0	3	multi-exon	FALSE	canonical	2	4	junction_5	80.9059811001497	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTACTTAAAGCATTTT	6	True	NA	-10	True	AATAAA	-26	NA	112446940	112430296	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_112430908_112432239_112432287_112432375_112434465_112438335_112438390_112439505_112439627_112440533_112440696_112442191_112442352_112443514_112443607_112445169_112445651_112446766
H1_mix_00010567	chr10	-	3336	11	FSM	ENSG00000023041.12	ENST00000682616.1	3328	11	0	-8	0	3	multi-exon	FALSE	canonical	2	4	junction_6	73.3709070408701	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTACTTAAAGCATTTT	5	True	NA	-10	True	AATAAA	-26	NA	112446941	112430296	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112434465_112438335_112438390_112439505_112439627_112440533_112440696_112442191_112442352_112443514_112443607_112445169_112445651_112446704
H1_mix_00010569	chr10	-	2407	12	NNC	ENSG00000023041.12	novel	2170	11	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	74.0901840455321	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTTTTTACTTAAAGCAT	11	True	NA	-13	True	AATAAA	-23	NA	112446935	112430299	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112433282_112433540_112433639_112434296_112434465_112438335_112438390_112440533_112440696_112442191_112442352_112443514_112443607_112445169_112445651_112446586
H1_mix_00010570	chr10	-	1501	11	NIC	ENSG00000023041.12	novel	2145	11	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_10	68.2132685040088	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTACTCTGGTTAAGATGT	753	False	NA	-5	True	ACTAAA	-15	NA	112446823	112430723	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112433282_112434296_112434465_112438335_112438390_112440533_112440696_112442191_112442260_112443514_112443607_112445169_112445651_112446766
H1_mix_00010574	chr10	-	4287	10	FSM	ENSG00000198924.8	ENST00000369305.1	4241	10	-46	0	-46	0	multi-exon	TRUE	canonical	3	48	junction_9	13.4412301024373	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTCTGGTGTCTTTTGT	570	False	NA	NA	False	AATAAA	-13	NA	113854429	113834728	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_113835313_113837061_113837204_113841405_113841561_113842342_113842489_113844103_113844245_113845684_113845804_113847201_113847336_113848979_113850645_113852722_113853848_113854353
H1_mix_00010575	chr10	-	7243	16	FSM	ENSG00000165813.20	ENST00000369287.8	7228	16	0	-15	0	15	multi-exon	FALSE	canonical	3	36	junction_6	10.715720538847	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTTATTTGTTTATATG	7	True	NA	10	True	ATTAAA	-37	NA	114174203	114120846	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_114125227_114125885_114126106_114127460_114127672_114129890_114129972_114131146_114131337_114131928_114132185_114134912_114135056_114135890_114135978_114136147_114136247_114137185_114137291_114144496_114144617_114145548_114145762_114151091_114151221_114157553_114157681_114162636_114163330_114174014
H1_mix_00010576	chr10	-	7344	17	FSM	ENSG00000165813.20	ENST00000648613.1	7343	17	53	-54	23	15	multi-exon	TRUE	canonical	3	19	junction_15	14.2647949512077	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTTATTTGTTTATATG	497	False	NA	10	True	ATTAAA	-37	NA	114174179	114120846	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_114125227_114125885_114126106_114127460_114127672_114129890_114129972_114131146_114131337_114131928_114132185_114134912_114135056_114135890_114135978_114136147_114136247_114137185_114137291_114144496_114144617_114145548_114145762_114151091_114151221_114157553_114157681_114162636_114163330_114173140_114173266_114174014
H1_mix_00010577	chr10	-	1928	2	FSM	ENSG00000165813.20	ENST00000369286.1	1928	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCAGTGCTGCTGCTATT	-10	True	NA	-5	True	AATAAA	-22	NA	114174220	114161607	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_114163330_114174014
H1_mix_00010578	chr10	-	3728	19	FSM	ENSG00000169129.15	ENST00000304129.9	3722	19	0	-6	0	6	multi-exon	TRUE	canonical	3	25	junction_3	6.3469638897101	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGTTCATGAAATGACTT	-5	True	NA	2	True	AATAAA	-25	NA	114404502	114294817	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_114296069_114296977_114297101_114297219_114297414_114299259_114299416_114300193_114300363_114300444_114300691_114301353_114301466_114302338_114302485_114304718_114304931_114307804_114307910_114308432_114308518_114310353_114310444_114313870_114314051_114315559_114315766_114323170_114323262_114331802_114331898_114333220_114333296_114340602_114340732_114404439
H1_mix_00010583	chr10	-	6802	17	NIC	ENSG00000099204.21	novel	6841	18	NA	NA	0	51	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	69.7203958232453	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATCTCATTTTAAAAAGC	-3	True	NA	41	True	NA	NA	NA	114526918	114431060	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_114436374_114437843_114437925_114439175_114439251_114440081_114440090_114441016_114441078_114441721_114441787_114444028_114444135_114445311_114445404_114447879_114448027_114451623_114451672_114465697_114465828_114468180_114468217_114472976_114473133_114473878_114473957_114487957_114488017_114491790_114491879_114526659
H1_mix_00010584	chr10	-	2255	16	FSM	ENSG00000099204.21	ENST00000369253.6	2255	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	74.4593550573436	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCCCAGATTGGCCCAG	-14	True	NA	NA	False	AAGAAA	-14	NA	114526835	114435440	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_114436374_114437843_114437925_114439175_114439251_114440081_114440090_114441016_114441078_114441721_114441787_114444028_114444135_114445311_114445404_114447879_114448021_114451623_114451672_114465697_114465828_114468180_114468217_114472976_114473133_114487957_114488017_114491790_114491879_114526659
H1_mix_00010590	chr10	-	4887	10	FSM	ENSG00000151892.16	ENST00000439649.8	4887	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	2.97313070227992	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGTGTGGTTTCCATTTC	1685	False	NA	NA	False	NA	NA	NA	116273009	116061281	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_116064545_116065572_116065627_116089740_116089923_116093701_116093837_116096654_116096765_116125220_116125558_116269502_116269587_116270821_116271116_116271989_116272276_116272867
H1_mix_00010592	chr10	-	1791	3	FSM	ENSG00000165863.17	ENST00000588224.1	1791	3	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	3	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTTGTTTTAGAATATA	5	True	NA	-1	True	AATAAA	-23	NA	116670264	116664285	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_116665827_116668257_116668324_116670080
H1_mix_00010596	chr10	-	5841	13	FSM	ENSG00000165868.16	ENST00000635765.1	5841	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_11	7.48888064622032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCCCAGATTTTTTTTC	-50	True	NA	0	True	AATAAA	-19	NA	116849741	116671191	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_116675419_116676398_116676503_116679502_116679762_116681151_116681257_116681790_116681878_116683790_116683963_116692350_116692468_116698634_116698740_116700942_116701130_116705150_116705279_116707199_116707286_116834934_116835023_116849565
H1_mix_00010599	chr10	-	4894	4	FSM	ENSG00000165868.16	ENST00000453491.3	4894	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	0.942809041582063	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCCTTTGTGTGTCCTT	-10	True	NA	-3	True	CATAAA	-43	NA	116849701	116828763	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_116833374_116834934_116835023_116835197_116835258_116849565
H1_mix_00010600	chr10	-	4799	3	FSM	ENSG00000165868.16	ENST00000674326.1	525	3	50	-4324	0	-4	multi-exon	FALSE	canonical	2	8	junction_1	4	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGTGTGCCTTTGTGTGT	21	True	NA	-7	True	CATAAA	-39	NA	116849670	116828767	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_116833374_116834934_116835023_116849565
H1_mix_00010603	chr10	-	1754	1	FSM	ENSG00000277879.1	ENST00000614747.1	1553	1	-287	86	-287	-86	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCTTGTCCAAACATTTT	NA	False	NA	NA	False	CATAAA	-21	NA	117268955	117267201	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_117267200_117269000
H1_mix_00010605	chr10	-	6467	6	NNC	ENSG00000165650.12	novel	9672	5	NA	NA	0	-3178	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	75.9541967240784	152	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCATCTCTATGGAATTAT	1	True	NA	NA	False	AAAAAG	-8	NA	117375440	117280451	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_117281352_117281378_117285472_117290185_117290349_117318871_117318975_117340979_117341103_117374355
H1_mix_00010609	chr10	-	6556	6	FSM	ENSG00000107560.12	ENST00000369199.5	6078	6	-351	-127	-2	95	multi-exon	FALSE	canonical	2	9	junction_2	30.8480145228182	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTGGTGTATTGTAGC	-7	True	NA	-3	True	AATAAA	-15	NA	118046943	118004820	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_118009226_118015064_118015111_118033981_118034042_118038971_118039441_118040122_118040566_118045810
H1_mix_00010610	chr10	-	13750	9	FSM	ENSG00000165669.14	ENST00000369183.9	13898	9	0	148	0	-148	multi-exon	FALSE	canonical	3	169	junction_7	63.7058670767458	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAACTAGGTTTCTATAC	-13	True	NA	NA	False	GATAAA	-41	NA	118342324	118298072	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_118310909_118311206_118311314_118326153_118326244_118335113_118335214_118335395_118335427_118335553_118335642_118336181_118336424_118341726_118341928_118342269
H1_mix_00010611	chr10	-	775	2	FSM	ENSG00000165669.14	ENST00000467890.1	775	2	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGGTTCAAGTGATTCT	NA	False	NA	NA	False	NA	NA	NA	118311486	118310413	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_118310909_118311206
H1_mix_00010612	chr10	-	872	8	FSM	ENSG00000165669.14	ENST00000369172.8	872	8	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_7	82.0592120710057	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAAATTTGGGATTTTGA	-9	True	NA	-27	True	ACTAAA	-12	NA	118342320	118310745	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_118310909_118311206_118311314_118326153_118326244_118335113_118335214_118335395_118335427_118335553_118335642_118336181_118336424_118342269
H1_mix_00010615	chr10	-	11035	9	FSM	ENSG00000151893.15	ENST00000369151.8	11035	9	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_8	9.49670995661129	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTTGTTTTTGCTGAAT	17	True	NA	-2	True	AATAAA	-22	NA	118754970	118676410	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_118686169_118686597_118686642_118691264_118691404_118695140_118695231_118701305_118701409_118707491_118707588_118729294_118729398_118730283_118730411_118754395
H1_mix_00010617	chr10	-	872	3	FSM	ENSG00000151893.15	ENST00000489169.1	517	3	-317	-38	-317	0	multi-exon	FALSE	canonical	3	93	junction_2	8	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAACGTTGC	NA	False	NA	NA	False	TTTAAA	-10	NA	118691882	118685958	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_118686169_118686597_118686642_118691264
H1_mix_00010618	chr10	-	1202	1	FSM	ENSG00000277687.1	ENST00000613826.1	1175	1	-214	187	-214	-187	mono-exon	FALSE	NA	NA	NA	NA	NA	312	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTTAATTCTCTTTAA	NA	False	NA	NA	False	NA	NA	NA	118693749	118692547	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_118692500_118693700
H1_mix_00010621	chr10	-	6659	22	FSM	ENSG00000107581.13	ENST00000369144.8	6659	22	0	0	0	0	multi-exon	FALSE	canonical	3	608	junction_17	138.080229069422	287	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTTCTCATCAAAGCTAA	-6	True	NA	-3	True	AATAAA	-18	NA	119080817	119033669	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_119036269_119037118_119037310_119038237_119038440_119041993_119042773_119044053_119044143_119049800_119049986_119050520_119050675_119051198_119051322_119056739_119056854_119056935_119057041_119057955_119058304_119059211_119059398_119059601_119059719_119060745_119060845_119061223_119061329_119065398_119065571_119069445_119069655_119070885_119071086_119072889_119073054_119073440_119073578_119073746_119073938_119080627
H1_mix_00010627	chr10	-	1570	7	FSM	ENSG00000165672.7	ENST00000298510.4	1553	7	0	-17	0	17	multi-exon	FALSE	canonical	3	4416	junction_4	207.105783491325	549	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTGTTGGATCAGCTTA	-1	True	NA	-1	True	AATAAA	-32	NA	119178812	119167702	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_119168534_119169176_119169343_119172381_119172486_119173736_119173873_119174450_119174593_119177020_119177154_119178754
H1_mix_00010628	chr10	-	918	5	FSM	ENSG00000148908.15	ENST00000369103.3	923	5	0	5	0	-5	multi-exon	FALSE	canonical	3	47	junction_1	4.32290411644765	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACGTATCACACTACCT	-11	True	NA	-30	True	ATTAAA	-21	NA	119542719	119499821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_119500260_119515508_119515653_119526031_119526119_119527305_119527425_119542589
H1_mix_00010629	chr10	-	5072	12	FSM	ENSG00000151923.18	ENST00000369093.6	5072	12	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_10	52.134917155174	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTTTTTCTTATTGTCG	864	False	NA	-4	True	AATAAA	-19	NA	119596495	119571801	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_119575792_119576610_119576751_119577079_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119581921_119582010_119582168_119582224_119582458_119582609_119588151_119588249_119596433
H1_mix_00010630	chr10	-	3827	12	FSM	ENSG00000151923.18	ENST00000436547.7	3827	12	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_10	41.8872946673028	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGACTGAAGTGTCCTT	-2	True	NA	16	True	AATAAA	-33	NA	119596964	119573464	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_119575792_119576610_119576751_119577079_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119581921_119582010_119582168_119582224_119582458_119582558_119588151_119588249_119596433
H1_mix_00010631	chr10	-	2334	13	FSM	ENSG00000151923.18	ENST00000497671.5	2321	13	0	-13	0	0	multi-exon	FALSE	canonical	3	20	junction_8	69.6696071947206	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTGATATAATAGGAAAAA	-4	True	NA	-15	True	AATAAA	-28	NA	119597029	119575398	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_119575792_119576610_119576751_119577079_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119580470_119580847_119581921_119582010_119582168_119582224_119582458_119582558_119588151_119588249_119596433
H1_mix_00010632	chr10	-	1727	11	FSM	ENSG00000151923.18	ENST00000470781.5	1727	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_10	66.5987987879661	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAATAAAGACAATTCTGAC	3846	False	NA	-41	True	AATAAA	-2	NA	119593513	119575424	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_119575792_119576610_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119581921_119582010_119582168_119582224_119582458_119582558_119588151_119588249_119593451
H1_mix_00010635	chr10	-	4169	16	FSM	ENSG00000197771.13	ENST00000360003.7	4169	16	0	0	0	0	multi-exon	FALSE	canonical	2	172	junction_7	136.644973888134	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGGTTGTATTTTCTCC	819	False	NA	2	True	TTTAAA	-20	NA	119872754	119829403	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_119831601_119832011_119832101_119835539_119835705_119836895_119837030_119838534_119838701_119840842_119840961_119842471_119842596_119843247_119843427_119847612_119847714_119849424_119849577_119853049_119853195_119857337_119857440_119858883_119858926_119859040_119859182_119859798_119859885_119872526
H1_mix_00010636	chr10	-	4216	16	FSM	ENSG00000197771.13	ENST00000369077.4	4216	16	0	0	0	0	multi-exon	FALSE	canonical	2	341	junction_11	105.996855299265	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTAGAGTTTAAACGT	26	True	NA	0	True	NA	NA	NA	119872843	119829439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_119831601_119832011_119832101_119835539_119835705_119836895_119837030_119838534_119838701_119840842_119840961_119842471_119842596_119843253_119843427_119847612_119847714_119849424_119849577_119853049_119853195_119857337_119857440_119858883_119858926_119859040_119859182_119859798_119859885_119872526
H1_mix_00010637	chr10	-	600	2	Genic_Genomic	ENSG00000220842.6	novel	483	1	NA	NA	-45	2629	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2071	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGGTAGAATTCAGCAGT	NA	False	NA	NA	False	NA	NA	NA	120355228	120352071	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr10_-_120352087_120354643
H1_mix_00010638	chr10	-	483	1	FSM	ENSG00000220842.6	ENST00000495531.1	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGGTGTTAAAAAAAAAAAT	42	False	NA	NA	False	NA	NA	NA	120355183	120354700	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_120354700_120355200
H1_mix_00010639	chr10	-	5156	9	FSM	ENSG00000066468.24	ENST00000684516.1	4989	9	-135	-32	-135	17	multi-exon	FALSE	canonical	3	468	junction_7	71.3730297451355	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTTCCTGTGCTTGGAG	8872	False	NA	16	True	AATAAA	-41	NA	121506376	121478314	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_121480022_121483697_121483804_121485394_121485533_121487353_121487425_121487990_121488114_121496531_121496723_121498494_121498606_121500825_121500948_121503789
H1_mix_00010640	chr10	-	4287	18	NIC	ENSG00000066468.24	novel	4624	18	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_17	180.319612437909	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCGTGTCTTACCAAATG	2129	False	NA	-1	True	AATAAA	-24	NA	121596628	121478331	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_121480022_121483697_121483804_121485394_121485533_121487353_121487425_121487990_121488114_121496531_121496723_121498494_121498606_121500825_121500948_121503789_121503942_121515122_121515320_121517318_121517464_121519978_121520170_121538591_121538716_121551289_121551460_121564501_121564580_121565437_121565705_121593708_121593968_121596476
H1_mix_00010641	chr10	-	4611	18	NIC	ENSG00000066468.24	novel	4624	18	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	3	135	junction_9	133.501240873929	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGCAACTTATTTTTTTAA	300	False	121598467	-21	True	AATAAA	-44	NA	121598457	121478351	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_121480022_121483697_121483804_121485394_121485533_121487353_121487425_121487990_121488114_121496531_121496723_121498494_121498606_121500825_121500948_121503789_121503942_121515122_121515320_121517318_121517464_121519978_121520170_121538591_121538716_121551289_121551460_121564501_121564580_121565437_121565705_121593708_121593968_121597961
H1_mix_00010642	chr10	-	4335	17	NIC	ENSG00000066468.24	novel	3061	18	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	3	52	junction_10	225.567617356747	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATACTCGTGTCTTACCAA	2	True	NA	-4	True	AATAAA	-21	NA	121598428	121478334	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_121480022_121483697_121483804_121485394_121485533_121487353_121487425_121487990_121488114_121496531_121496723_121498494_121498606_121500825_121500948_121503789_121503942_121515122_121515320_121518681_121518830_121519978_121520170_121538591_121538716_121551289_121551460_121564501_121564580_121593708_121593968_121597961
H1_mix_00010643	chr10	-	4602	18	NIC	ENSG00000066468.24	novel	3061	18	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_10	199.892254714408	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCGTGTCTTACCAAATG	5	True	NA	-1	True	AATAAA	-24	NA	121598425	121478331	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_121480022_121483697_121483804_121485394_121485533_121487353_121487425_121487990_121488114_121496531_121496723_121498494_121498606_121500825_121500948_121503789_121503942_121515122_121515320_121518681_121518830_121519978_121520170_121538591_121538716_121551289_121551460_121564501_121564580_121565437_121565705_121593708_121593968_121597961
H1_mix_00010644	chr10	-	3205	12	NNC	ENSG00000066468.24	novel	3501	17	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	235.184401011927	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTTACCAAATGGTTTC	NA	False	NA	4	True	AATAAA	-29	NA	121518829	121478326	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_121480022_121483697_121483804_121485394_121485533_121487353_121487425_121487990_121488114_121496531_121496723_121498494_121498606_121500825_121500948_121503789_121503941_121515115_121515320_121517318_121517464_121518681
H1_mix_00010645	chr10	-	4272	16	FSM	ENSG00000066468.24	ENST00000684153.1	4251	16	0	-21	0	0	multi-exon	FALSE	canonical	3	51	junction_14	206.567460059796	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTATTTTTTTAATACTC	4	True	NA	-16	True	AATAAA	-9	NA	121598366	121478346	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_121480114_121483697_121483804_121485394_121485533_121487353_121487425_121487990_121488114_121496531_121496723_121498494_121498606_121500825_121500948_121503789_121503942_121515122_121515320_121517318_121517464_121519978_121520170_121538591_121538716_121551289_121551460_121593708_121593968_121597961
H1_mix_00010646	chr10	-	4602	18	NNC	ENSG00000066468.24	novel	4624	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	158.663928523571	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGACAAAATAAATGTCACG	299	False	121598467	-37	True	AATAAA	-28	NA	121598458	121478367	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_121480022_121483697_121483804_121485394_121485533_121487353_121487425_121487990_121488114_121496531_121496723_121498494_121498606_121500825_121500948_121503789_121503941_121515115_121515320_121517318_121517464_121519978_121520170_121538591_121538716_121551289_121551460_121564501_121564580_121565437_121565705_121593708_121593968_121597961
H1_mix_00010647	chr10	-	4307	17	NIC	ENSG00000066468.24	novel	4369	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	109	junction_15	169.843574631924	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAATAAATGTCACGCAAC	-2	True	NA	-33	True	AATAAA	-32	NA	121598432	121478363	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_121480022_121483697_121483804_121485394_121485533_121487353_121487425_121487990_121488114_121496531_121496723_121498494_121498606_121500825_121500948_121503789_121503942_121515122_121515320_121517318_121517464_121519978_121520170_121538591_121538716_121551289_121551460_121564501_121564580_121593708_121593968_121597961
H1_mix_00010648	chr10	-	3547	16	FSM	ENSG00000066468.24	ENST00000356226.8	3547	16	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_14	184.800673399446	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTTTTGATTTATTTGT	299	False	121598467	-103	True	AATATA	-19	NA	121598458	121479071	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_121480022_121483697_121483804_121485394_121485533_121487353_121487425_121487990_121488114_121496531_121496723_121498494_121498606_121500825_121500948_121503789_121503942_121515122_121515320_121517318_121517464_121519978_121520170_121538591_121538716_121551289_121551460_121593708_121593968_121597961
H1_mix_00010652	chr10	-	4534	10	FSM	ENSG00000107669.19	ENST00000689297.1	4527	10	3	-10	2	1	multi-exon	FALSE	canonical	1	2	junction_5	75.5764676942221	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTCTTGGTGGTCATTAC	-14	True	NA	-4	True	AATAAA	-18	NA	121928028	121740422	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_121743859_121790168_121790290_121836717_121836818_121841081_121841264_121870005_121870039_121910905_121911152_121913789_121913894_121922348_121922412_121924265_121924330_121927843
H1_mix_00010653	chr10	-	4896	12	FSM	ENSG00000107669.19	ENST00000369043.8	4895	12	0	-1	0	1	multi-exon	FALSE	canonical	3	114	junction_5	47.0654546859306	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTCTTGGTGGTCATTAC	-17	True	NA	-4	True	AATAAA	-18	NA	121928031	121740422	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_121743859_121790168_121790290_121836717_121836818_121841081_121841264_121870005_121870039_121898840_121898970_121902390_121902621_121910905_121911152_121913789_121913894_121922348_121922412_121924265_121924330_121927843
H1_mix_00010654	chr10	-	4896	12	FSM	ENSG00000107669.19	ENST00000224652.12	4895	12	0	-1	0	1	multi-exon	FALSE	canonical	3	95	junction_5	52.477622149315	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTCTTGGTGGTCATTAC	-17	True	NA	-4	True	AATAAA	-18	NA	121928031	121740422	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_121743859_121790168_121790290_121836717_121836818_121841081_121841264_121870005_121870039_121899865_121899995_121902390_121902621_121910905_121911152_121913789_121913894_121922348_121922412_121924265_121924330_121927843
H1_mix_00010655	chr10	-	2114	13	NNC	ENSG00000107669.19	novel	2121	11	NA	NA	1	-7437	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	83.0546590438422	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTTCTTAGTTTTCATT	9	True	NA	NA	False	AATAAA	-31	NA	121928005	121751228	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_121751780_121790168_121790290_121836717_121836818_121841081_121841264_121870005_121870039_121898840_121898970_121899865_121899995_121902390_121902621_121910905_121911152_121913789_121913894_121922348_121922412_121924265_121924330_121927843
H1_mix_00010657	chr10	-	1392	11	FSM	ENSG00000107672.15	ENST00000369023.8	1391	11	0	-1	0	1	multi-exon	FALSE	canonical	3	638	junction_10	46.5232200089375	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTAGTTGCTCTTTATT	-22	True	NA	37	True	ATTAAA	-27	NA	121975217	121957089	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_121957260_121959323_121959411_121959500_121959596_121960357_121960407_121961422_121961518_121963237_121963329_121965285_121965386_121967654_121967807_121970938_121971070_121974003_121974082_121974873
H1_mix_00010662	chr10	-	1958	9	FSM	ENSG00000138161.14	ENST00000392790.6	1958	9	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_8	24.0022785376722	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCACTGTGTCGGTGTGTT	-1	True	NA	-11	True	AATAAA	-36	NA	122845857	122832157	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_122832451_122833671_122833941_122834705_122835098_122836177_122836351_122836830_122837049_122837403_122837555_122839016_122839232_122841177_122841329_122845761
H1_mix_00010664	chr10	-	710	4	FSM	ENSG00000213185.7	ENST00000368898.8	728	4	0	18	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0.942809041582063	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCTCTTTGCTGCCAATA	-10	True	NA	NA	False	AATAAA	-18	NA	122879581	122849095	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_122849440_122850423_122850551_122855644_122855787_122879484
H1_mix_00010665	chr10	-	2913	6	FSM	ENSG00000119965.13	ENST00000481909.2	2913	6	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	18.1592951405059	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTTTCACGTATTGGC	-20	True	NA	-2	True	AATAAA	-23	NA	122954227	122930900	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_122932662_122937704_122938160_122948648_122948856_122951953_122952027_122952828_122953033_122954014
H1_mix_00010666	chr10	-	4785	5	ISM	ENSG00000119965.13	ENST00000481909.2	2913	6	18	3153	18	-1451	5prime_fragment	FALSE	canonical	3	123	junction_1	3.41869858279434	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGGTGTATTCTAGAG	-2	True	NA	-3	True	AATACA	-17	NA	122954209	122934053	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_-_122938160_122948648_122948856_122951953_122952027_122952828_122953033_122954014
H1_mix_00010668	chr10	-	614	4	FSM	ENSG00000095574.12	ENST00000496605.5	614	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	36.3073301445069	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATGGAAAGACAGCTGGA	-6	True	NA	NA	False	NA	NA	NA	123008807	122995993	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_122996177_122998492_122998659_123007025_123007177_123008693
H1_mix_00010669	chr10	-	289	3	FSM	ENSG00000095574.12	ENST00000469821.1	289	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	40	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACCCATCTGTTGAAGTT	28	False	NA	NA	False	NA	NA	NA	123008773	122996146	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_122996177_122998492_122998672_123008693
H1_mix_00010674	chr10	-	4779	8	FSM	ENSG00000182022.18	ENST00000346248.7	4810	8	22	9	-18	-9	multi-exon	FALSE	canonical	3	9	junction_7	14.2313250347569	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCCAAGCTCTTCCTGG	1256	False	NA	-12	True	NA	NA	NA	124092432	124007676	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_124010340_124012332_124012481_124021255_124021413_124038514_124038672_124042300_124042448_124044579_124044920_124045666_124046725_124092323
H1_mix_00010676	chr10	-	3555	6	FSM	ENSG00000182022.18	ENST00000628426.1	3553	6	0	-2	0	2	multi-exon	FALSE	canonical	3	9	junction_5	16.0174904401407	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATACTTGTTTAACGTAAAT	-5	True	NA	1	True	AATAAA	-22	NA	124092414	124019650	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_124021413_124038514_124038672_124042300_124042448_124044579_124044920_124045666_124046725_124092323
H1_mix_00010679	chr10	-	570	2	FSM	ENSG00000065154.12	ENST00000483711.1	570	2	0	0	0	0	multi-exon	FALSE	canonical	3	750	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAGGTTACCTAATGGGA	9143	False	NA	NA	False	NA	NA	NA	124405929	124403844	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_124403921_124405435
H1_mix_00010685	chr10	-	5161	7	FSM	ENSG00000203791.15	ENST00000368836.7	3599	7	19	-1581	0	1	multi-exon	FALSE	canonical	3	142	junction_2	129.218161778186	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTTGTTTTCAAAAGAA	-12	True	NA	NA	False	AATAAA	-14	NA	124791868	124756252	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_124760504_124762299_124762559_124765391_124765609_124774674_124774783_124789042_124789158_124790272_124790339_124791723
H1_mix_00010687	chr10	-	3587	7	FSM	ENSG00000203791.15	ENST00000466270.5	3587	7	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_4	155.844384634873	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATTGTCCTTGAATGATT	-12	True	NA	NA	False	ACTAAA	-19	NA	124791868	124757830	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_124760504_124762299_124762559_124765391_124765609_124774674_124774783_124789038_124789158_124790272_124790339_124791723
H1_mix_00010689	chr10	-	6940	11	FSM	ENSG00000175029.17	ENST00000337195.9	6939	11	0	-1	0	1	multi-exon	FALSE	canonical	3	204	junction_10	197.400709218584	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCTTTCTGAAAGAGCG	547	False	NA	0	True	AATAAA	-23	NA	125160513	124984315	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125110989_125111094_125160318
H1_mix_00010690	chr10	-	3619	12	NIC	ENSG00000175029.17	novel	6939	11	NA	NA	91	1391	combination_of_known_splicesites	FALSE	canonical	2	5	junction_10	284.717548887714	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAAAGCCTTTGGCTTGCC	652	False	NA	-13	True	ATTAAA	-24	NA	125160408	124987743	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125110989_125111094_125122656_125122869_125160318
H1_mix_00010691	chr10	-	3708	12	NIC	ENSG00000175029.17	novel	6939	11	NA	NA	11	1391	combination_of_known_junctions	FALSE	canonical	3	82	junction_11	241.002451892469	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAAAGCCTTTGGCTTGCC	45	False	NA	-13	True	ATTAAA	-24	NA	125161015	124987743	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125110989_125111094_125160318_125160521_125160826
H1_mix_00010692	chr10	-	3607	11	NIC	ENSG00000175029.17	novel	6939	11	NA	NA	8	1391	combination_of_known_junctions	FALSE	canonical	3	82	junction_10	244.435758431536	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAAAGCCTTTGGCTTGCC	42	False	NA	-13	True	ATTAAA	-24	NA	125161018	124987743	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125160318_125160521_125160826
H1_mix_00010693	chr10	-	3405	10	NIC	ENSG00000175029.17	novel	2036	11	NA	NA	8	1391	combination_of_known_splicesites	FALSE	canonical	3	69	junction_9	217.90200538457	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAAAGCCTTTGGCTTGCC	42	False	NA	-13	True	ATTAAA	-24	NA	125161018	124987743	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125160826
H1_mix_00010694	chr10	-	2346	13	NIC	ENSG00000175029.17	novel	6939	11	NA	NA	13	-8	combination_of_known_junctions	FALSE	canonical	3	15	junction_10	303.137608557932	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTATCAGTCCCTTGG	47	False	NA	-48	True	AATAAA	-10	NA	125161013	124989232	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125088190_125088320_125110989_125111094_125160318_125160521_125160826
H1_mix_00010696	chr10	-	636	3	FSM	ENSG00000224023.10	ENST00000528844.1	718	3	82	0	-4	0	multi-exon	FALSE	canonical	3	6	junction_2	2	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGCTGCAATGAGTGTT	25	True	NA	-10	True	NA	NA	NA	125719464	125707236	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_125707760_125709497_125709568_125719421
H1_mix_00010697	chr10	-	441	3	FSM	ENSG00000188690.15	ENST00000616800.4	441	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	200.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCCTGGTGCAGTGGC	NA	False	NA	NA	False	AATAAA	-18	NA	125796163	125784979	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_125785261_125794879_125794979_125796102
H1_mix_00010700	chr10	-	1347	10	FSM	ENSG00000188690.15	ENST00000368797.10	1336	10	0	-11	0	2	multi-exon	TRUE	canonical	0	0	junction_3	117.840235011877	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTTGCTGTGTGTCATT	-14	True	NA	-2	True	AATAAA	-30	NA	125823258	125788574	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_125789006_125794879_125794979_125796102_125796189_125798064_125798146_125807412_125807488_125812213_125812289_125815033_125815131_125816176_125816261_125816436_125816526_125823028
H1_mix_00010701	chr10	-	1198	9	NIC	ENSG00000188690.15	novel	1279	10	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	118.502900808377	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTATGGTTGCTGTGTGTC	90	False	NA	-5	True	AATAAA	-27	NA	125823193	125788577	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_125789006_125794879_125794979_125796102_125796189_125807412_125807488_125812213_125812289_125815033_125815131_125816176_125816261_125816436_125816526_125823028
H1_mix_00010702	chr10	-	3188	5	FSM	ENSG00000188690.15	ENST00000462490.5	3188	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	178.247545565149	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTGTGGACATACAT	9189	False	NA	-18	True	ATTAAA	-24	NA	125807465	125791519	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_125794389_125794879_125794979_125796102_125796189_125798064_125798146_125807412
H1_mix_00010703	chr10	-	1556	7	FSM	ENSG00000188690.15	ENST00000368778.7	1556	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	128.968665445009	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCTTGTGGGATTAAGT	87	False	NA	-1	True	AATAAA	-20	NA	125823196	125802056	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_125803025_125807412_125807488_125812213_125812289_125815033_125815131_125816176_125816261_125816436_125816526_125823028
H1_mix_00010704	chr10	-	1559	4	NIC	ENSG00000089876.12	novel	803	3	NA	NA	-96	7674	combination_of_known_junctions	FALSE	canonical	3	100	junction_3	22.0151463012778	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAGGAAGTGTTTCTAAA	6605	False	NA	NA	False	AATAAA	-17	NA	125896532	125859454	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_125859976_125866989_125867184_125880542_125881072_125896217
H1_mix_00010707	chr10	-	11420	14	FSM	ENSG00000148773.14	ENST00000368653.7	11417	14	0	-3	0	3	multi-exon	FALSE	canonical	3	44	junction_8	41.586581814117	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTATTTTTATTATAGGG	288	False	NA	3	True	AATAAA	-28	NA	128126204	128096655	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_128099256_128101257_128101702_128102578_128109424_128110377_128110534_128111644_128111817_128111926_128112046_128112132_128112446_128113426_128113603_128116490_128116537_128119252_128119320_128122880_128122997_128123090_128123170_128125575_128125757_128126098
H1_mix_00010709	chr10	-	12716	15	FSM	ENSG00000148773.14	ENST00000368654.8	12716	15	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_9	26.3156855529634	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGGTATTTTTATTATA	8	True	NA	0	True	AATAAA	-25	NA	128126423	128096658	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_128099256_128101257_128101702_128102578_128109424_128110377_128110534_128111644_128111817_128111926_128112046_128112132_128112446_128113426_128113603_128114927_128116008_128116490_128116537_128119252_128119320_128122880_128122997_128123090_128123170_128125575_128125757_128126098
H1_mix_00010711	chr10	-	843	4	FSM	ENSG00000237489.5	ENST00000637128.2	843	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	3.85861230093008	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTAATCTTGGAGTGAA	-8	True	NA	-8	True	ATTAAA	-23	NA	130110830	130063895	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_130064384_130079565_130079629_130079736_130079902_130110703
H1_mix_00010712	chr10	-	241	1	FSM	ENSG00000277218.1	ENST00000612008.1	430	1	183	6	183	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	251	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCAAGTTTTCTGTCCTC	6007	False	NA	-5	True	AATAAA	-12	NA	130104815	130104574	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_130104600_130104800
H1_mix_00010713	chr10	-	2620	12	FSM	ENSG00000176769.9	ENST00000368642.4	2618	12	0	-2	0	2	multi-exon	FALSE	canonical	3	37	junction_2	6.8947219003122	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTATGTGTGACTAAGAC	-13	True	NA	-5	True	AATAAA	-16	NA	131311721	131092388	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_131093319_131098305_131098425_131104264_131104355_131116798_131116935_131134378_131134449_131146505_131146661_131163121_131163211_131166796_131166886_131260258_131260445_131308210_131308392_131309152_131309300_131311293
H1_mix_00010714	chr10	-	3591	6	FSM	ENSG00000176171.12	ENST00000368636.9	1542	6	0	-2049	0	2049	multi-exon	FALSE	canonical	3	799	junction_1	100.547302300957	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCTCTACTAAAATACAAGA	-1	True	NA	NA	False	NA	NA	NA	131981923	131965634	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_131968570_131970637_131970788_131970863_131970971_131973033_131973119_131973792_131973944_131981760
H1_mix_00010715	chr10	-	3096	6	FSM	ENSG00000176171.12	ENST00000633835.2	1062	6	-67	-1967	-67	1	multi-exon	FALSE	canonical	2	4	junction_1	382.462233429655	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTATTTACATATGGTT	NA	False	NA	-21	True	AATAAA	-22	NA	131982034	131967682	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_131970012_131970637_131970788_131970863_131970971_131973033_131973119_131973792_131973944_131981760
H1_mix_00010717	chr10	-	1852	13	FSM	ENSG00000165752.17	ENST00000462160.5	1866	13	17	-3	17	3	multi-exon	FALSE	canonical	0	0	junction_2	14.6465297368808	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCATGTTCTGCGTACG	NA	False	NA	-6	True	NA	NA	NA	132249091	132207488	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_132208152_132209033_132209102_132209294_132209365_132222640_132222773_132222860_132222987_132224406_132224524_132225232_132225337_132225526_132225617_132225746_132225785_132226794_132226969_132227976_132228129_132245899_132245956_132249029
H1_mix_00010719	chr10	-	1147	2	FSM	ENSG00000165752.17	ENST00000368619.3	733	2	-16	-398	0	398	multi-exon	FALSE	canonical	3	14	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCATGCACCCCACCTTCT	-6	True	NA	NA	False	NA	NA	NA	132331847	132323638	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_132324374_132331435
H1_mix_00010720	chr10	-	2760	2	FSM	ENSG00000165752.17	ENST00000456004.1	607	2	6	-2159	0	2159	multi-exon	FALSE	canonical	3	32	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCGTTAATTACTCTTT	10	True	NA	NA	False	NA	NA	NA	132331831	132328121	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_132330486_132331435
H1_mix_00010721	chr10	-	2676	2	NNC	ENSG00000165752.17	novel	607	2	NA	NA	0	2121	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	0	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAATAATAGTAGAACTCC	10	True	NA	NA	False	TTTAAA	-36	NA	132331831	132328159	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_132330486_132331481
H1_mix_00010724	chr10	-	321	2	FSM	ENSG00000171811.14	ENST00000417862.2	394	2	0	73	0	-73	multi-exon	FALSE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTAGTTGACTGTGTAAA	NA	False	NA	NA	False	AATAAA	-21	NA	132876908	132872600	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_132872825_132876811
H1_mix_00010727	chr10	-	1166	6	FSM	ENSG00000171811.14	ENST00000475340.1	1156	6	0	-10	0	10	multi-exon	FALSE	canonical	3	19	junction_2	6.88767014308903	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCGAATTGTTTGAATCCA	19	True	NA	-1	True	AATAAA	-25	NA	132942543	132937104	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_132937676_132938588_132938754_132940995_132941061_132941590_132941723_132941979_132942105_132942435
H1_mix_00010729	chr10	-	4832	16	FSM	ENSG00000130640.15	ENST00000682256.1	5027	16	204	-9	204	-9	multi-exon	FALSE	canonical	3	201	junction_6	25.4423968123201	1342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCCTGTGAGTAAACACA	7879	False	NA	-34	True	NA	NA	NA	133301286	133278665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_133279902_133281272_133281437_133282222_133282343_133283077_133283222_133283881_133284003_133285084_133285214_133285455_133285629_133288128_133288310_133288839_133289021_133289823_133289970_133292498_133292689_133293038_133293239_133293561_133293770_133297951_133298112_133299426_133299604_133299984
H1_mix_00010730	chr10	-	3911	18	FSM	ENSG00000130640.15	ENST00000682905.1	3896	18	0	-15	0	-3	multi-exon	FALSE	canonical	3	16	junction_16	55.7970246382144	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAGTAAACACATTTATC	19	True	NA	-28	True	NA	NA	NA	133308846	133278659	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_133279902_133281272_133281437_133282222_133282343_133283077_133283222_133283881_133284003_133285084_133285214_133285455_133285629_133288128_133288310_133288839_133289021_133289823_133289970_133292498_133292689_133293038_133293239_133293561_133293770_133297951_133298112_133299426_133299604_133299984_133300114_133302758_133302981_133308822
H1_mix_00010731	chr10	-	4191	18	FSM	ENSG00000130640.15	ENST00000252936.8	3929	18	-262	0	0	0	multi-exon	FALSE	canonical	3	201	junction_6	24.6387041855824	2364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGCTGTCAGTCTCAGT	-13	True	NA	-3	True	AGTAAA	-16	NA	133309134	133278634	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_133279902_133281272_133281437_133282222_133282343_133283077_133283222_133283881_133284003_133285084_133285214_133285455_133285629_133288128_133288310_133288839_133289021_133289823_133289970_133292498_133292689_133293038_133293239_133293561_133293770_133297951_133298112_133299426_133299604_133299984_133300114_133302791_133302981_133308822
H1_mix_00010732	chr10	-	3262	17	FSM	ENSG00000130640.15	ENST00000683383.1	3262	17	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	56.2792979256138	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCTGAGGACTCACCCG	188	False	NA	NA	False	NA	NA	NA	133308977	133279286	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_133279902_133281272_133281437_133283077_133283222_133283881_133284003_133285084_133285214_133285455_133285629_133288128_133288310_133288839_133289021_133289823_133289970_133292498_133292689_133293038_133293239_133293561_133293770_133297951_133298112_133299426_133299604_133299984_133300114_133302791_133302981_133308822
H1_mix_00010735	chr10	-	1306	2	FSM	ENSG00000130640.15	ENST00000480198.1	1306	2	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGGGACTGGTATTAACC	17	True	NA	NA	False	NA	NA	NA	133308848	133301700	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_133302981_133308822
H1_mix_00010736	chr10	-	655	2	FSM	ENSG00000130643.9	ENST00000467611.1	655	2	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGAGGCTTCCATCTCTCC	699	False	NA	-2	True	AGTAAA	-14	NA	133326314	133325427	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_133325567_133325798
H1_mix_00010738	chr10	-	764	6	FSM	ENSG00000148803.12	ENST00000368552.7	762	6	0	-2	0	0	multi-exon	FALSE	canonical	3	59	junction_1	87.3576556461997	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGCTCTGTTCTCACGC	-2	True	NA	NA	False	NA	NA	NA	133358025	133355157	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_133355506_133355737_133355812_133356639_133356739_133356942_133357014_133357186_133357256_133357922
H1_mix_00010740	chr10	-	628	6	FSM	ENSG00000148803.12	ENST00000368551.1	628	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_5	89.318755029389	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTTGTGAAAATGATGGA	-31	True	NA	NA	False	NA	NA	NA	133357737	133355202	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_133355437_133355737_133355812_133356639_133356739_133356942_133357014_133357186_133357256_133357656
H1_mix_00010747	chr10	+	1538	1	Intergenic	novelGene_188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGGACAGAGA	NA	False	NA	NA	False	NA	NA	NA	22703913	22705451	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr10_+_22703900_22705500
H1_mix_00010748	chr10	+	271	1	Intergenic	novelGene_191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGACTAAACTGAGGAAT	NA	False	NA	NA	False	AATAAA	-32	NA	25769829	25770100	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr10_+_25769800_25770100
H1_mix_00010749	chr10	+	476	1	Intergenic	novelGene_194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAGTCTGACCTAAAAGG	NA	False	NA	NA	False	AGTAAA	-10	NA	49827263	49827739	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr10_+_49827300_49827700
H1_mix_00010753	chr10	+	226	1	Intergenic	novelGene_196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGGAGTGCCTAAGGAGAC	NA	False	NA	NA	False	TATAAA	-36	NA	58861568	58861794	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr10_+_58861600_58861800
H1_mix_00010755	chr10	+	305	1	Intergenic	novelGene_198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTTAATGATGTGTGAG	594	False	NA	NA	False	NA	NA	NA	67765093	67765398	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr10_+_67765100_67765400
H1_mix_00010757	chr10	+	293	1	Intergenic	novelGene_202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTTAAAAACACACCTCA	NA	False	NA	NA	False	ACTAAA	-3	NA	76822196	76822489	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr10_+_76822200_76822500
H1_mix_00010762	chr10	+	5422	1	Intergenic	novelGene_206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	NA	False	NA	12	True	AATAAA	-18	NA	90295264	90300686	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr10_+_90295300_90300700
H1_mix_00010763	chr10	+	274	1	Intergenic	novelGene_208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTAGTCTCCTTGCCCA	NA	False	NA	NA	False	NA	NA	NA	96733482	96733756	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr10_+_96733500_96733800
H1_mix_00010764	chr10	+	212	1	Intergenic	novelGene_210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATCCCATCCCGCAGCAC	NA	False	NA	NA	False	ATTAAA	-30	NA	96734989	96735201	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr10_+_96735000_96735200
H1_mix_00010766	chr10	+	1643	1	Intergenic	novelGene_211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGCAGGGTACAGGAATG	NA	False	NA	NA	False	NA	NA	NA	99999244	100000887	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr10_+_99999200_100000900
H1_mix_00010769	chr10	+	1032	1	Intergenic	novelGene_214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCGTCTGAGAAGGCCA	NA	False	NA	NA	False	AGTAAA	-10	NA	120848115	120849147	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr10_+_120848100_120849100
H1_mix_00010784	chr10	+	3466	20	NIC	ENSG00000134452.20	novel	3548	21	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_13	60.2829891525249	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCGCTGTGTGATGTCTGC	-18	True	NA	8	True	ATTAAA	-21	NA	5890224	5937593	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_5890347_5903019_5903176_5906036_5906633_5908924_5909056_5909158_5909295_5910937_5911129_5913746_5913840_5914177_5914270_5915402_5915572_5916233_5916457_5917419_5917508_5917589_5917677_5918341_5918479_5921447_5921570_5923620_5923697_5924310_5924509_5925366_5925493_5927434_5927542_5936455_5936588_5937109
H1_mix_00010786	chr10	+	3702	22	FSM	ENSG00000134452.20	ENST00000379999.6	3702	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	73.0124705901533	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCGCTGTGTGATGTCTGC	16	False	NA	8	True	ATTAAA	-21	NA	5894385	5937593	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_5894512_5895055_5895188_5903019_5903176_5906036_5906633_5908924_5909056_5909158_5909295_5910937_5911129_5913746_5913840_5914177_5914270_5915402_5915572_5916233_5916457_5917419_5917508_5917589_5917677_5918341_5918479_5921257_5921358_5921447_5921570_5923620_5923697_5924310_5924509_5925366_5925493_5927434_5927542_5936455_5936588_5937109
H1_mix_00010787	chr10	+	578	3	FSM	ENSG00000134452.20	ENST00000494526.1	578	3	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	11	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTCTTAGATGTAGATGAA	NA	False	NA	NA	False	AATAAA	-17	NA	5906505	5909478	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_5906633_5908924_5909056_5909158
H1_mix_00010789	chr10	+	2281	12	NIC	ENSG00000134453.16	novel	3275	12	NA	NA	-8	-8	combination_of_known_junctions	FALSE	canonical	3	85	junction_8	240.740901838848	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCCTCTCTGGTTGTT	2	True	NA	32	True	TATAAA	-25	NA	6089045	6115758	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_6089194_6097047_6097189_6101270_6101388_6104930_6105098_6106140_6106239_6108685_6108743_6109985_6110128_6112209_6113069_6113507_6113582_6114048_6114148_6115238_6115312_6115452
H1_mix_00010792	chr10	+	676	5	FSM	ENSG00000134453.16	ENST00000447032.1	676	5	0	0	0	0	multi-exon	FALSE	canonical	3	696	junction_1	119.817569663218	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCGTGTGGCCAGAGGGAG	NA	False	NA	NA	False	NA	NA	NA	6104970	6112461	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_6105098_6106140_6106239_6108685_6108743_6109985_6110128_6112209
H1_mix_00010803	chr10	+	963	2	FSM	ENSG00000151465.14	ENST00000497963.1	963	2	0	0	0	0	multi-exon	FALSE	canonical	3	2712	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAGGAGGACGACTGATG	1388	False	NA	NA	False	NA	NA	NA	12246053	12250319	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_12246278_12249580
H1_mix_00010806	chr10	+	4428	19	NIC	ENSG00000065328.17	novel	3157	20	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_8	81.5669837587867	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCACTTCTTAGTTTTGC	-7	True	NA	13	True	AATAAA	-13	NA	13161558	13211104	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_13161607_13164127_13164210_13170921_13171264_13172375_13172481_13172624_13172766_13175509_13175682_13180441_13180608_13182932_13183101_13188880_13189081_13191298_13191400_13192254_13192366_13192450_13192569_13195040_13195270_13197622_13197768_13198688_13198808_13201420_13201535_13204218_13204365_13209090_13209134_13209226
H1_mix_00010824	chr10	+	6754	15	NNC	ENSG00000120594.17	novel	12275	14	NA	NA	0	54148	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	83.0642731226112	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACCACTTCATTACCAATC	-1	True	NA	NA	False	NA	NA	NA	19816431	20344004	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_19817192_20001774_20001987_20046868_20047016_20068169_20068240_20143294_20143418_20147783_20147903_20164467_20164568_20176998_20177095_20177327_20177410_20211668_20211730_20217425_20217577_20219063_20219103_20245344_20245506_20279702_20284287_20343955
H1_mix_00010828	chr10	+	4784	21	NIC	ENSG00000078403.17	novel	4955	23	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_11	28.0615395158569	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGTGCCATTCTCATTTG	11	True	NA	15	True	AATAAA	-19	NA	21524652	21743630	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_21524776_21538832_21538913_21586293_21586349_21595330_21595441_21612347_21612452_21614830_21614925_21617111_21617208_21651672_21651769_21670448_21670705_21673349_21673920_21681331_21681377_21713771_21713951_21726243_21726356_21727855_21727929_21730899_21731055_21732898_21733088_21733503_21733593_21733767_21734130_21735138_21735236_21740029_21740237_21741938
H1_mix_00010830	chr10	+	5106	22	NIC	ENSG00000078403.17	novel	5143	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_12	26.866344252889	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTCCGTGCCATTCTCA	-12	True	NA	11	True	AATAAA	-15	NA	21534231	21743626	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_21534521_21534644_21534805_21538832_21538913_21586293_21586349_21595330_21595441_21612347_21612452_21614830_21614925_21617111_21617208_21651672_21651769_21670448_21670705_21673349_21673920_21681331_21681377_21713771_21713951_21726243_21726356_21727855_21727929_21730899_21731055_21732898_21733088_21733503_21733593_21733767_21734130_21735138_21735236_21740029_21740237_21741938
H1_mix_00010846	chr10	+	612	5	FSM	ENSG00000148450.13	ENST00000472663.1	612	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	217.823753296099	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGGCTGAATTTGCTGCT	8538	False	NA	23	True	AATAAA	-1	NA	23104143	23120954	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_23104245_23110241_23110319_23119045_23119135_23119303_23119452_23120757
H1_mix_00010849	chr10	+	3366	27	FSM	ENSG00000095777.17	ENST00000642197.1	3376	27	1	9	1	-9	multi-exon	FALSE	canonical	3	17	junction_10	7.49003282475961	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAATTGTAACATTTTACA	2	True	NA	4	True	AATAAA	-20	NA	25934229	26166230	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_25934329_25935743_25935831_25952093_25952279_25954873_25955009_25996489_25996595_25997158_25997259_26016819_26016897_26021502_26021649_26024021_26024088_26026376_26026533_26066974_26067075_26068767_26068885_26070110_26070216_26070317_26070402_26088202_26088406_26096380_26096480_26096567_26096683_26120675_26120803_26125397_26125609_26128390_26128539_26143447_26143602_26145445_26145535_26147429_26147560_26153849_26153930_26154745_26154824_26157309_26157516_26166066
H1_mix_00010850	chr10	+	1215	8	FSM	ENSG00000095777.17	ENST00000376302.5	2723	8	0	1508	0	-1508	multi-exon	FALSE	canonical	3	23	junction_5	8.91227083456127	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTTTTGCTTTGCTTTA	-4	True	NA	NA	False	NA	NA	NA	25934273	26021973	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_25934329_25935743_25935831_25952093_25952279_25954873_25955009_25996489_25996595_25997158_25997259_26016819_26016897_26021502
H1_mix_00010851	chr10	+	1195	8	NNC	ENSG00000095777.17	novel	2203	17	NA	NA	134	-1553	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	14.6357125427037	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCCCCAATGAGTCAGTG	80	False	NA	74	True	NA	NA	NA	25934407	26021928	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_25934488_25935743_25935831_25952093_25952279_25954873_25955009_25996489_25996595_25997158_25997259_26016819_26016897_26021502
H1_mix_00010854	chr10	+	2986	11	FSM	ENSG00000120539.15	ENST00000342386.10	2968	11	-18	0	0	0	multi-exon	FALSE	canonical	3	25	junction_9	72.0610851986008	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTAATTTACTTGCATAT	-4	True	NA	18	True	AATAAA	-22	NA	27155351	27186924	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_27155613_27158548_27158687_27159618_27159759_27161093_27161183_27165063_27165171_27165388_27165540_27167101_27167275_27169943_27171084_27173120_27173260_27181479_27181582_27186378
H1_mix_00010855	chr10	+	2622	8	FSM	ENSG00000099246.18	ENST00000621805.5	2622	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	329.694168735146	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCATTTGTGTAGGAAGTA	NA	False	NA	20	True	AATAAA	-20	NA	27504233	27539829	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_27504438_27509874_27509931_27526827_27526890_27531528_27531616_27532506_27532580_27533734_27533854_27533927_27533995_27537875
H1_mix_00010857	chr10	+	1681	8	FSM	ENSG00000095787.24	ENST00000428935.6	1839	8	-4	162	-4	-162	multi-exon	FALSE	non_canonical	0	0	junction_6	182.077579339026	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATCTTCATAACAGTTT	NA	False	NA	NA	False	AATAAA	-6	NA	28532488	28608431	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_28533008_28533997_28534035_28535561_28535758_28583398_28583506_28589735_28589852_28590719_28590833_28595694_28596042_28608185
H1_mix_00010858	chr10	+	3526	14	NIC	ENSG00000095787.24	novel	3655	15	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	145.214226567624	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATTACCTTGACTTTT	0	True	NA	NA	False	AATAAA	-20	NA	28532765	28620990	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_28533008_28533997_28534035_28535561_28535758_28583398_28583506_28589735_28589852_28590719_28590833_28595732_28596042_28608185_28608432_28610698_28610822_28611773_28611923_28614566_28614686_28616175_28616363_28617656_28617785_28619536
H1_mix_00010860	chr10	+	3759	14	NIC	ENSG00000095787.24	novel	5912	14	NA	NA	22	1	combination_of_known_junctions	FALSE	canonical	3	13	junction_8	134.346544737259	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATTACCTTGACTTTT	9	True	NA	NA	False	AATAAA	-20	NA	28533139	28620990	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_28533621_28533997_28534035_28535561_28535758_28583398_28583506_28589735_28589852_28590719_28590833_28595732_28596042_28608185_28608432_28610707_28610822_28611773_28611923_28614566_28614686_28616172_28616363_28617656_28617785_28619536
H1_mix_00010861	chr10	+	3766	14	NIC	ENSG00000095787.24	novel	5912	14	NA	NA	15	7	combination_of_known_junctions	FALSE	canonical	2	13	junction_8	150.514227049733	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCTTGACTTTTTTTTTC	2	True	NA	NA	False	AATAAA	-26	NA	28533132	28620996	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_28533621_28533997_28534035_28535561_28535758_28583398_28583506_28589735_28589852_28590719_28590833_28595732_28596042_28608185_28608432_28610710_28610822_28611773_28611923_28614566_28614686_28616175_28616363_28617656_28617785_28619536
H1_mix_00010862	chr10	+	3434	13	NIC	ENSG00000095787.24	novel	5486	14	NA	NA	15	7	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	158.267420491044	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCTTGACTTTTTTTTTC	2	True	NA	NA	False	AATAAA	-26	NA	28533132	28620996	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_28533583_28533997_28534035_28535561_28535758_28583398_28583506_28589735_28589852_28590719_28590833_28608185_28608432_28610698_28610822_28611773_28611923_28614566_28614686_28616172_28616363_28617656_28617785_28619536
H1_mix_00010865	chr10	+	1903	2	FSM	ENSG00000095739.11	ENST00000497699.1	1884	2	-19	0	-19	0	multi-exon	FALSE	canonical	3	366	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTACCTAAATAAACAAAAAT	-7	True	NA	-13	True	NA	NA	NA	28677490	28682677	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_28677974_28681257
H1_mix_00010866	chr10	+	1680	3	FSM	ENSG00000107968.10	ENST00000375322.2	932	3	-294	-454	-71	454	multi-exon	FALSE	canonical	3	9	junction_1	3.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATCTTGAAGGCTGAATT	NA	False	NA	7	True	AATAAA	-15	NA	30433949	30439935	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_30434379_30437175_30437407_30438915
H1_mix_00010869	chr10	+	1850	6	NIC	ENSG00000095794.20	novel	2857	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_4	46.1319845660253	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACTGTGTAATATAAAAGA	12	False	NA	-17	True	TTTAAA	-30	NA	35127047	35212435	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_35127194_35148367_35148492_35178888_35178987_35179133_35179277_35206894_35207052_35211253
H1_mix_00010871	chr10	+	1577	6	NIC	ENSG00000095794.20	novel	2857	8	NA	NA	2	-23	combination_of_known_junctions	FALSE	canonical	3	38	junction_4	61.5642753551116	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAATTATTTGCAGGTC	14	False	NA	-8	True	NA	NA	NA	35127049	35212099	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_35127194_35178888_35178987_35179133_35179277_35188199_35188389_35206894_35207052_35211253
H1_mix_00010872	chr10	+	1416	3	FSM	ENSG00000095794.20	ENST00000460270.5	1416	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	39	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACTGTGTAATATAAAAGA	30	True	NA	-17	True	TTTAAA	-30	NA	35127116	35212435	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_35127194_35206894_35207052_35211253
H1_mix_00010875	chr10	+	6196	6	FSM	ENSG00000189180.16	ENST00000307441.13	6196	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	97.4363381906361	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATCTTGTTTCTGTACTA	-39	True	NA	23	True	AATAAA	-24	NA	38010649	38060063	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_38010784_38012297_38012351_38015966_38016046_38016870_38017016_38017290_38017387_38054374
H1_mix_00010882	chr10	+	2280	14	NIC	ENSG00000165731.21	novel	3457	16	NA	NA	-5	47	combination_of_known_splicesites	FALSE	canonical	3	7	junction_2	7.91896831484996	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAAAGTCTGCTCTGAA	13	False	NA	9	True	TTTAAA	-20	NA	43077080	43126822	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_43077332_43100458_43100723_43112098_43112225_43112852_43112964_43113555_43113676_43114479_43114737_43116583_43116732_43118372_43118481_43119530_43119746_43120080_43120204_43121945_43122017_43123670_43123809_43124882_43124983_43126574
H1_mix_00010883	chr10	+	3439	6	NIC	ENSG00000169826.8	novel	3765	8	NA	NA	52	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_4	24.7661058707258	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAATGTGATAAATTTAT	-6	True	NA	NA	False	AATAAA	-24	NA	43138496	43185302	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_43138568_43154896_43155811_43158714_43158932_43160493_43160596_43175950_43176033_43183249
H1_mix_00010884	chr10	+	2284	4	FSM	ENSG00000243660.12	ENST00000652684.1	2284	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5.55777733351102	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTGATATTTCATTGAAC	NA	False	NA	7	True	AATAAA	-21	NA	43436847	43483181	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_43437156_43475720_43475848_43476106_43476203_43481428
H1_mix_00010888	chr10	+	2300	10	NIC	ENSG00000107551.21	novel	3631	11	NA	NA	0	-4	combination_of_known_splicesites	FALSE	canonical	3	6	junction_3	29.7263237045494	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGAACTGAAGAAGTGAGA	14	True	NA	5	True	AATAAA	-11	NA	44959801	44994703	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_44959867_44970164_44970265_44971772_44971849_44984021_44984114_44984812_44984971_44989273_44989376_44989669_44989722_44990947_44991070_44991904_44992003_44993268
H1_mix_00010898	chr10	+	4483	30	NNC	ENSG00000172661.20	novel	4642	31	NA	NA	15	-29	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	76.7660714542307	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAATAAAATTTTATTGG	41	False	NA	-28	True	NA	NA	NA	45727302	45792932	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_45727321_45727416_45727540_45728861_45729027_45737982_45738046_45740072_45740247_45743389_45743484_45744823_45744883_45746599_45746648_45750095_45750207_45750750_45750839_45751481_45751554_45752587_45752707_45753179_45753238_45754485_45754546_45754935_45755116_45757011_45757140_45763387_45763490_45765678_45765811_45769448_45769619_45773255_45773359_45777272_45777426_45778952_45779136_45784564_45784694_45784820_45784902_45785508_45785632_45786611_45786675_45787034_45787248_45788870_45789492_45790355_45790534_45792260
H1_mix_00010903	chr10	+	2406	7	NNC	ENSG00000189014.7	novel	2712	8	NA	NA	16496	795	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.2517165380311	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGTGTATGTTTTTAAAA	158	False	NA	19	True	AATAAA	-30	NA	47706202	47731231	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_47706733_47710220_47710415_47710581_47710717_47715650_47715858_47719832_47720062_47726840_47726957_47730236
H1_mix_00010904	chr10	+	2503	13	NIC	ENSG00000107643.17	novel	6046	15	NA	NA	12	-2	combination_of_known_junctions	FALSE	canonical	3	12	junction_12	27.8398196035024	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTAGCTATGAGCCTGTT	15	True	NA	18	True	AATAAA	-15	NA	48306691	48435875	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_48306822_48308094_48308289_48401611_48401783_48404851_48404982_48409878_48409938_48410029_48410169_48420154_48420321_48424513_48424586_48425887_48426071_48426379_48426505_48427079_48427144_48431192_48431271_48434883
H1_mix_00010908	chr10	+	2993	15	NIC	ENSG00000178440.8	novel	3593	18	NA	NA	18	30	combination_of_known_splicesites	FALSE	canonical	1	6	junction_8	38.8106339309531	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATGGCACCTCTTTTTC	-6	True	NA	15	True	AATAAA	-27	NA	49942074	50010506	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_49942301_49945031_49945091_49952125_49952220_49952448_49952534_49955001_49955061_49958369_49958481_49973011_49973143_49987164_49987235_49989307_49989377_49991675_49991745_49994394_49994430_50001995_50002097_50004684_50004721_50008024_50008077_50008710
H1_mix_00010914	chr10	+	9072	14	NNC	ENSG00000185532.20	novel	6957	18	NA	NA	-12958	0	intron_retention	FALSE	canonical	2	14	junction_1	6.23219356939357	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGTTGATGTTTAATTCC	NA	False	NA	15	True	AATAAA	-19	NA	52033789	52298350	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_52037113_52054483_52054562_52062536_52062632_52133839_52133906_52161888_52161964_52251569_52251667_52271349_52271490_52272391_52272482_52280788_52280931_52282152_52282317_52288725_52288849_52288930_52288994_52290223_52290291_52293801
H1_mix_00010916	chr10	+	3521	5	FSM	ENSG00000165443.12	ENST00000373880.9	3521	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.78535710713571	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATCAAGTCATTATTTAA	11	True	NA	NA	False	AATACA	-16	NA	59176642	59247770	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_59176960_59234303_59234501_59236482_59236658_59238587_59238706_59245056
H1_mix_00010920	chr10	+	736	1	FSM	ENSG00000272767.1	ENST00000609436.1	1335	1	25	574	25	-574	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCGGGCAGCGGCGGCGC	NA	False	NA	NA	False	NA	NA	NA	63465253	63465989	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_63465300_63466000
H1_mix_00010921	chr10	+	1215	4	FSM	ENSG00000228065.12	ENST00000657227.2	1320	4	44	61	-1	-61	multi-exon	FALSE	canonical	3	12	junction_1	8.2192186706253	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGCTGAATACATGAAAAT	-2	True	NA	NA	False	NA	NA	NA	65570555	65586218	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_65570760_65571424_65571580_65572934_65573057_65585484
H1_mix_00010922	chr10	+	1235	1	FSM	ENSG00000272892.1	ENST00000610279.1	1222	1	12	-25	12	25	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAACAATAAGAAGTATAATA	NA	False	NA	29	True	ACTAAA	-40	NA	67849536	67850771	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_67849500_67850800
H1_mix_00010923	chr10	+	1408	10	NIC	ENSG00000096746.18	novel	2356	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	639	junction_1	394.320543920837	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGATGTTGATACTTTT	-1	True	NA	19	True	AATAAA	-15	NA	68332063	68342271	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_68332236_68337198_68337334_68337857_68337997_68338502_68338643_68339139_68339227_68339439_68339556_68341173_68341310_68341584_68341681_68341758_68341852_68341977
H1_mix_00010925	chr10	+	7430	11	NNC	ENSG00000138336.9	novel	9612	12	NA	NA	40157	-16	at_least_one_novel_splicesite	TRUE	canonical	3	11	junction_1	46.2817458616245	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCTCTCATAAAACTGG	-1	True	NA	-4	True	AATAAA	-16	NA	68600493	68694471	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_68600770_68600980_68601035_68644697_68647006_68651845_68651937_68652500_68652595_68667044_68667257_68672894_68673046_68681398_68681489_68682835_68682974_68686355_68686708_68690807
H1_mix_00010926	chr10	+	561	1	FSM	ENSG00000213025.2	ENST00000366529.4	357	1	-88	-116	-88	116	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAGAAAACA	NA	False	NA	NA	False	AATAAA	-20	NA	68632282	68632843	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_68632300_68632800
H1_mix_00010927	chr10	+	501	6	FSM	ENSG00000060339.14	ENST00000536391.5	552	6	51	0	51	0	multi-exon	FALSE	canonical	2	4	junction_1	192.392307538529	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACTCCTCAGCCAACAGC	NA	False	NA	NA	False	NA	NA	NA	68721062	68742408	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_68721157_68722454_68722578_68736875_68737049_68737844_68737890_68740628_68740662_68742375
H1_mix_00010930	chr10	+	4434	23	NNC	ENSG00000060339.14	novel	4540	24	NA	NA	0	-13	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_10	175.046327988189	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTTTAAATTAACCTGT	-3	True	NA	-6	True	ATTAAA	-4	NA	68721226	68792362	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_68721283_68722454_68722578_68736875_68737049_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754678_68754828_68755369_68755537_68757293_68757378_68761006_68761193_68765887_68766080_68771205_68771446_68772987_68773100_68786135_68786219_68786545_68786693_68787926_68788048_68788142_68788329_68789709_68789916_68791206
H1_mix_00010934	chr10	+	3422	4	FSM	ENSG00000165730.16	ENST00000298596.11	3387	4	-35	0	-35	0	multi-exon	FALSE	canonical	3	18	junction_2	2.62466929133727	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTAGTGAATTTTTT	-7	True	NA	14	True	AATATA	-16	NA	68827495	68893060	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_68827934_68881957_68882111_68884259_68886619_68892588
H1_mix_00010935	chr10	+	4895	15	FSM	ENSG00000165732.14	ENST00000354185.9	4664	15	-232	1	-197	-1	multi-exon	FALSE	canonical	3	605	junction_10	60.1601603884097	453	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTAGTGGCTTTTGTTTT	NA	False	NA	12	True	AATAAA	-15	NA	68955937	68985067	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_68956313_68959805_68960250_68962081_68962158_68963290_68963470_68965376_68965495_68967017_68967204_68968975_68969122_68970200_68970351_68971890_68972053_68973544_68973665_68974669_68974744_68977528_68977689_68978841_68978977_68981536_68981582_68982542
H1_mix_00010939	chr10	+	480	4	FSM	ENSG00000156502.14	ENST00000486661.1	518	4	0	38	0	-38	multi-exon	FALSE	canonical	3	259	junction_1	6.94422221866655	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACCAAATAGAGTCACCTA	7401	False	NA	NA	False	NA	NA	NA	69187712	69195342	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_69187757_69189266_69189436_69191654_69191767_69195187
H1_mix_00010940	chr10	+	563	6	FSM	ENSG00000099282.10	ENST00000475069.5	605	6	0	42	0	-42	multi-exon	FALSE	canonical	3	82	junction_1	11.1427106217473	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGCAGAGGGGAAGAGCGA	NA	False	NA	NA	False	NA	NA	NA	69483824	69506298	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_69483877_69485140_69485216_69495593_69495690_69498279_69498397_69504437_69504486_69506123
H1_mix_00010941	chr10	+	509	2	FSM	ENSG00000236154.2	ENST00000428753.1	503	2	-6	0	-6	0	multi-exon	FALSE	canonical	3	24	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATTGTAAAGTGGAGTGC	840	False	NA	14	True	AATAAA	-28	NA	69575800	69577154	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_69576138_69576982
H1_mix_00010942	chr10	+	1147	5	NNC	ENSG00000171224.9	novel	1073	4	NA	NA	-46	56682	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	67.5481309882072	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGAGCCACAGAGGCACC	NA	False	NA	NA	False	AAAAAG	-2	NA	69630200	69690278	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_69630314_69631479_69631548_69631708_69631840_69632789_69633592_69690245
H1_mix_00010943	chr10	+	978	3	NIC	ENSG00000171224.9	novel	1073	4	NA	NA	21	-2	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	79	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGAGTCCATATAAAGAAA	16	True	NA	112	True	AATAAA	-15	NA	69630271	69633594	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_69630314_69631708_69631840_69632789
H1_mix_00010944	chr10	+	2516	36	NIC	ENSG00000197467.17	novel	2007	37	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	15.923900660482	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTGTACATAGAATATTTA	-11	True	NA	-90	True	NA	NA	NA	69801909	69958732	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_69802718_69822368_69822439_69867797_69867806_69872183_69872211_69880502_69880554_69887455_69887492_69888303_69888331_69889413_69889441_69894551_69894579_69894674_69894702_69895549_69895577_69897474_69897532_69902747_69902856_69904932_69904960_69905786_69905823_69917288_69917334_69918284_69918318_69919061_69919089_69921881_69921936_69922707_69922795_69923801_69923856_69924962_69925008_69925803_69925873_69927086_69927111_69928936_69929000_69930042_69930088_69930399_69930553_69935349_69935392_69936755_69936783_69937634_69937716_69944124_69944179_69945670_69945725_69947306_69947343_69952881_69952969_69957003_69957043_69958698
H1_mix_00010945	chr10	+	1833	34	FSM	ENSG00000197467.17	ENST00000520133.5	1833	34	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	16.2079008950365	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTCTAACCTTGGATTGG	454	False	NA	NA	False	NA	NA	NA	69802423	69958701	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_69802718_69822368_69822439_69867797_69867806_69872183_69872211_69887455_69887492_69888303_69888331_69889413_69889441_69894551_69894579_69894674_69894702_69895549_69895577_69897474_69897532_69902747_69902856_69904932_69904960_69905786_69905823_69917288_69917334_69918284_69918318_69919061_69919089_69921881_69921936_69922707_69922795_69923801_69923856_69924962_69925008_69925803_69925873_69927086_69927111_69928936_69929000_69930042_69930088_69930399_69930553_69935349_69935392_69936755_69936783_69937634_69937716_69944124_69944179_69945670_69945725_69947306_69947343_69957003_69957043_69958698
H1_mix_00010950	chr10	+	1679	6	FSM	ENSG00000099284.15	ENST00000676923.1	3221	6	0	1542	0	772	multi-exon	FALSE	canonical	3	464	junction_2	53.3329166650391	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCCACGAGTGGCAGAGG	-14	True	NA	NA	False	NA	NA	NA	70052840	70096525	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_70053001_70075599_70075831_70090059_70090167_70091756_70091955_70093734_70093846_70095653
H1_mix_00010951	chr10	+	1028	8	NIC	ENSG00000099284.15	novel	1932	9	NA	NA	69	-112	combination_of_known_junctions	FALSE	canonical	2	13	junction_6	184.761512027074	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTTTGATGACTCGAGCG	94	False	NA	NA	False	NA	NA	NA	70052948	70111571	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_70053001_70075599_70075831_70090059_70090167_70091756_70091955_70093734_70093846_70095653_70095754_70109032_70109208_70111517
H1_mix_00010953	chr10	+	501	1	FSM	ENSG00000229097.1	ENST00000428512.1	440	1	-14	-47	-14	47	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGCCTTTTGTTTGTA	20	True	NA	NA	False	AATGAA	-42	NA	70163670	70164171	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_70163700_70164200
H1_mix_00010954	chr10	+	5802	15	NNC	ENSG00000166224.17	novel	5778	15	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	27.5433795149041	607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGAAAGTGTTACCTGT	-22	True	NA	NA	False	AATAAA	-25	NA	70815920	70881184	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_70816127_70816810_70816881_70844475_70844639_70851142_70851211_70854707_70854856_70857613_70857691_70859370_70859500_70868344_70868434_70869791_70869898_70871047_70871147_70871836_70871987_70873350_70873590_70875401_70875549_70876540_70876662_70877194
H1_mix_00010957	chr10	+	670	3	FSM	ENSG00000166224.17	ENST00000611290.4	670	3	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	15.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAAAGCATATCGGGATC	NA	False	NA	NA	False	NA	NA	NA	70857184	70868379	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_70857691_70859370_70859500_70868344
H1_mix_00010959	chr10	+	1951	4	FSM	ENSG00000198246.9	ENST00000644088.1	1927	4	-24	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	54.7133946630581	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCATTGATGTCTCTGTT	3	True	NA	21	True	AATAAA	-21	NA	71319258	71363390	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_71319311_71322755_71323055_71356080_71356244_71361953
H1_mix_00010960	chr10	+	2538	1	FSM	ENSG00000279406.1	ENST00000623796.1	2132	1	-421	15	-421	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGAGAGAGAAATGACTTA	NA	False	NA	1	True	AATAAA	-2	NA	71363821	71366359	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_71363800_71366400
H1_mix_00010961	chr10	+	1852	13	NIC	ENSG00000107736.22	novel	2000	14	NA	NA	-2	-146	combination_of_known_junctions	FALSE	canonical	2	12	junction_10	3.07769755210323	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGGCCACTGAGCTCTC	-2	True	NA	NA	False	NA	NA	NA	71396931	71646634	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_71397319_71439826_71439899_71446317_71446396_71510081_71510225_71510953_71511002_71511119_71511213_71566741_71566937_71570789_71570919_71577913_71577993_71615503_71615617_71617204_71617394_71645830_71645981_71646458
H1_mix_00010962	chr10	+	1967	2	FSM	ENSG00000168209.6	ENST00000471240.2	1966	2	-1	0	0	0	multi-exon	FALSE	canonical	3	875	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTAAGACCTATGCAATAT	-4	True	NA	-39	True	AATACA	-14	NA	72273918	72275981	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_72274061_72274156
H1_mix_00010964	chr10	+	2933	8	NNC	ENSG00000156026.15	novel	2937	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_7	157.930752068682	62	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATAGCATCTCATTCTTTA	3	True	NA	7	True	AATAAA	-20	NA	72692142	72887694	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_72692302_72834358_72834429_72859176_72859348_72860422_72860528_72868702_72868864_72871376_72871581_72884265_72884383_72885748
H1_mix_00010965	chr10	+	3079	10	NIC	ENSG00000156026.15	novel	2937	8	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	2	17	junction_1	219.318698149576	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACGATAGCATCTCATTCT	23	False	NA	4	True	AATAAA	-17	NA	72692162	72887691	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_72692302_72715110_72715227_72715853_72715903_72834358_72834429_72859176_72859348_72860422_72860528_72868702_72868864_72871376_72871581_72884265_72884383_72885744
H1_mix_00010966	chr10	+	746	1	FSM	ENSG00000279502.1	ENST00000624201.1	619	1	-163	36	-163	-36	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGATAACGTAATGAGACCT	4862	False	NA	NA	False	NA	NA	NA	72756234	72756980	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_72756200_72757000
H1_mix_00010968	chr10	+	1928	12	ISM	ENSG00000138286.15	ENST00000242505.11	5455	14	28	9053	28	-1	5prime_fragment	FALSE	canonical	3	35	junction_8	12.6713055156552	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGTTATAAATACATTTTG	26	False	NA	-9	True	AATAAA	-23	NA	73168146	73235451	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_+_73168387_73174686_73174792_73177845_73177976_73192555_73192699_73193476_73193594_73208618_73208787_73210250_73210439_73228059_73228185_73230421_73230526_73232938_73233164_73234816_73234941_73235192
H1_mix_00010969	chr10	+	463	2	FSM	ENSG00000236756.4	ENST00000513954.1	463	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATACTGAAGTTATTCAAA	972	False	NA	NA	False	AATAAA	-15	NA	73248382	73249358	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_73248451_73248963
H1_mix_00010970	chr10	+	895	2	NIC	ENSG00000227540.1	novel	548	3	NA	NA	4	-17	intron_retention	FALSE	canonical	3	12	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTTTTTTATTTTTAAA	13	False	NA	-3	True	ATTAAA	-3	NA	73252794	73254327	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_73253255_73253892
H1_mix_00010972	chr10	+	200	3	FSM	ENSG00000250959.3	ENST00000508551.1	200	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCCACATAGATTTTGG	429	False	NA	NA	False	NA	NA	NA	73731175	73737311	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_73731256_73735562_73735619_73737247
H1_mix_00010973	chr10	+	4680	22	FSM	ENSG00000176986.16	ENST00000465076.5	4668	22	-12	0	0	0	multi-exon	FALSE	canonical	3	446	junction_12	48.1183819845104	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATTAGCCTCATCTTTA	-18	True	NA	14	True	AATAAA	-15	NA	73744371	73772159	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_73744438_73746804_73747005_73751107_73751244_73759621_73759795_73760017_73760387_73760712_73760850_73763489_73763602_73763855_73763984_73765450_73765590_73765799_73765916_73766085_73766211_73766349_73766542_73766759_73766854_73767053_73767171_73767836_73768008_73768809_73768907_73769006_73769153_73769346_73769486_73769614_73769734_73769835_73770016_73770279_73770799_73770954
H1_mix_00010976	chr10	+	6070	26	NIC	ENSG00000214655.11	novel	5919	27	NA	NA	-34	0	intron_retention	TRUE	canonical	3	30	junction_13	14.8323969741913	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGACCTGGGCCTTTCCC	-27	True	NA	16	True	TATAAA	-24	NA	73785571	73801792	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_73786087_73788669_73788824_73789095_73789191_73789366_73789540_73789716_73789825_73789955_73790038_73790171_73790293_73790974_73791177_73791323_73791500_73791858_73792853_73793587_73793720_73793864_73794045_73794146_73794331_73794555_73794640_73795538_73795664_73796773_73797015_73797112_73797272_73797376_73797606_73797780_73798071_73798229_73798454_73799001_73799491_73800010_73800171_73800295_73800473_73800639_73800760_73801016_73801196_73801315
H1_mix_00010978	chr10	+	5972	27	NNC	ENSG00000214655.11	novel	6062	26	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_10	17.3384342365494	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGACCTGGGCCTTTCCC	8	True	NA	16	True	TATAAA	-24	NA	73785606	73801792	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_73786087_73788669_73788824_73789095_73789191_73789366_73789540_73789716_73789825_73789955_73790038_73790171_73790293_73790974_73791177_73791323_73791500_73791858_73792554_73792655_73792853_73793587_73793720_73793864_73794045_73794146_73794331_73794540_73794640_73795538_73795664_73796773_73797015_73797112_73797272_73797376_73797606_73797780_73798071_73798229_73798454_73799001_73799491_73800010_73800195_73800295_73800473_73800639_73800760_73801016_73801196_73801315
H1_mix_00010979	chr10	+	3713	17	FSM	ENSG00000214655.11	ENST00000603187.5	3713	17	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_15	19.035226390826	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGACCTGGGCCTTTCCC	665	False	NA	16	True	TATAAA	-24	NA	73792521	73801792	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_73792853_73793587_73793720_73793864_73794045_73794146_73794331_73794555_73794640_73795538_73795664_73796773_73797015_73797112_73797272_73797376_73797606_73797780_73798071_73798229_73798454_73799001_73799491_73800010_73800171_73800295_73800473_73800639_73800760_73801084_73801196_73801315
H1_mix_00010986	chr10	+	750	6	FSM	ENSG00000122861.16	ENST00000494287.1	750	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	37.1321962722379	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTACGGCCCTGGGTT	14	False	NA	NA	False	NA	NA	NA	73911146	73913753	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_73911219_73911524_73911613_73912214_73912323_73912923_73913099_73913289_73913382_73913538
H1_mix_00010988	chr10	+	381	2	NNC	ENSG00000156110.15	novel	443	4	NA	NA	-4	-72135	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGACCTACCTGAGTTCAA	9	True	NA	NA	False	AATAAA	-18	NA	74151230	74152458	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_74151344_74152190
H1_mix_00010989	chr10	+	8218	18	FSM	ENSG00000156650.14	ENST00000648725.1	8209	18	-9	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.9755697341263	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTTAGCCTCTTGTGT	-4	True	NA	9	True	AATAAA	-11	NA	74824926	75032284	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_74825357_74838682_74838753_74842599_74843479_74959969_74960079_74969659_74969776_74970019_74970102_74972506_74972640_74975398_74976331_74977315_74977438_74979223_74979340_74981786_74981929_74985079_74985242_74989018_74989113_75020581_75020814_75021125_75021286_75021880_75022232_75024957_75025250_75028488
H1_mix_00010996	chr10	+	6935	5	FSM	ENSG00000156671.15	ENST00000372687.4	6935	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	27.2798002192098	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGTTTCTTATTGAAAT	8	False	NA	NA	False	AATAAA	-17	NA	75111708	75182123	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_75111779_75150513_75151107_75164644_75164741_75168540_75168659_75176065
H1_mix_00011001	chr10	+	487	2	FSM	ENSG00000233871.2	ENST00000449852.1	487	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCAGTGGTTCTTGTTTTA	NA	False	NA	10	True	AATAAA	-14	NA	77927371	77929824	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_77927623_77929588
H1_mix_00011002	chr10	+	1127	3	FSM	ENSG00000138326.21	ENST00000466129.6	1104	3	-23	0	0	0	multi-exon	FALSE	canonical	3	9029	junction_1	1522	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGACCTCGTAATCCGCC	-1	True	NA	NA	False	NA	NA	NA	78033862	78036529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_78033905_78035351_78035418_78035510
H1_mix_00011003	chr10	+	3318	6	FSM	ENSG00000138326.21	ENST00000645698.1	3307	6	-11	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	4766.10866011257	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTTGCAGTTTCCTGGG	-1	True	NA	33	True	AATAAA	-32	NA	78033862	78040716	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_78033905_78035351_78035418_78035510_78035721_78037193_78037305_78037438_78040226_78040614
H1_mix_00011004	chr10	+	718	6	FSM	ENSG00000138326.21	ENST00000465692.2	718	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	4609.55982280304	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCACCTCTGACAGCAAGT	2	False	NA	NA	False	NA	NA	NA	78033890	78049164	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_78033905_78035351_78035418_78035510_78035721_78037193_78037305_78040614_78040748_78048980
H1_mix_00011005	chr10	+	7647	26	NNC	ENSG00000108175.19	novel	7615	25	NA	NA	0	41592	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	26.2451214514241	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAACTTAGCTGGGCTTG	-19	True	NA	NA	False	NA	NA	NA	79068965	79358111	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_79069271_79118914_79119025_79139681_79139778_79162052_79162134_79201583_79201693_79208335_79208450_79216168_79216275_79277180_79277326_79289774_79289890_79290958_79291177_79292157_79292357_79293380_79293654_79296470_79296654_79297612_79297691_79298405_79298581_79299049_79299192_79300731_79300943_79302106_79302213_79304014_79304176_79305163_79305232_79305532_79305602_79306099_79306345_79307404_79307572_79310923_79311185_79312641_79316515_79358074
H1_mix_00011006	chr10	+	7295	24	NNC	ENSG00000108175.19	novel	7615	25	NA	NA	51	-5	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	29.0455609771333	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGGTTTGGCGAATTAG	32	False	NA	10	True	AATAAA	-10	NA	79069016	79316514	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_79069271_79118914_79119025_79139681_79139778_79162055_79162134_79201583_79201693_79208335_79208450_79216168_79216275_79277180_79277326_79289774_79289890_79290958_79291177_79292157_79292357_79293380_79293654_79296470_79296654_79297612_79297691_79298405_79298581_79299049_79299192_79300731_79300943_79302106_79302213_79304014_79304176_79305163_79305232_79305532_79305602_79306099_79306345_79307404_79307572_79312641
H1_mix_00011010	chr10	+	1694	7	NNC	ENSG00000122378.14	novel	1723	6	NA	NA	0	46832	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	241.447544337619	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTGTAAAATAGGCCAG	25	True	NA	NA	False	NA	NA	NA	80408550	80483947	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_80408644_80420482_80420646_80422416_80422509_80425865_80426007_80427331_80427497_80431985_80432988_80483909
H1_mix_00011011	chr10	+	1701	7	NNC	ENSG00000122378.14	novel	1723	6	NA	NA	0	46832	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	241.447544337619	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTGTAAAATAGGCCAG	25	True	NA	NA	False	NA	NA	NA	80408550	80483947	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_80408644_80420482_80420646_80422416_80422509_80425865_80426007_80427331_80427497_80431985_80432995_80483909
H1_mix_00011012	chr10	+	3953	6	NNC	ENSG00000122378.14	novel	1723	6	NA	NA	10	1872	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	231.898771018736	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGGACAGAAAGGATTTAC	35	True	NA	NA	False	AAAAAG	-45	NA	80408560	80434869	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_80409069_80420482_80420646_80422416_80422509_80425865_80426007_80427331_80427497_80431985
H1_mix_00011014	chr10	+	2438	4	ISM	ENSG00000185737.13	ENST00000372142.6	3136	11	1096117	-213	174062	1	3prime_fragment	TRUE	canonical	3	10	junction_2	0.471404520791032	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATTTCTTTTACTGCAG	NA	False	NA	NA	False	AATAAA	-24	NA	82973803	82987180	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_+_82973916_82978949_82979121_82984782_82984855_82985097
H1_mix_00011015	chr10	+	4537	10	FSM	ENSG00000148600.15	ENST00000372117.6	4537	10	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_6	5.29150262212918	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACTCTGCAGAGTCATT	7160	False	NA	14	True	AATAAA	-14	NA	84201901	84217363	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_84201921_84202979_84203124_84204526_84204606_84205826_84205928_84208173_84208378_84208728_84208882_84211647_84211716_84212178_84212408_84213090_84213349_84214081
H1_mix_00011020	chr10	+	2103	3	FSM	ENSG00000107771.17	ENST00000359979.8	2066	3	-44	7	-44	-7	multi-exon	FALSE	canonical	3	108	junction_1	11.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACATTTGACTTAAATATA	NA	False	NA	NA	False	AATAAA	-15	NA	84328541	84373998	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_84328809_84371013_84372470_84373618
H1_mix_00011021	chr10	+	660	2	Genic_Genomic	ENSG00000178429.9	novel	821	1	NA	NA	37	-89	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTTCTGGAAAAGCCACT	63	False	NA	NA	False	NA	NA	NA	84560479	84561174	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr10_+_84560916_84560950
H1_mix_00011023	chr10	+	3230	13	FSM	ENSG00000107779.14	ENST00000636056.1	3233	13	3	0	3	0	multi-exon	FALSE	canonical	3	5	junction_12	117.956294872296	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAAATGTATTCATTTC	NA	False	NA	-23	True	NA	NA	NA	86838864	86929738	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_86838980_86875866_86876086_86890061_86890225_86892126_86892230_86899793_86899891_86900026_86900127_86912239_86912385_86917133_86917327_86919171_86919470_86921519_86921696_86923375_86923507_86923593_86924642_86929296
H1_mix_00011024	chr10	+	3235	13	FSM	ENSG00000107779.14	ENST00000635816.1	3238	13	3	0	3	0	multi-exon	TRUE	canonical	2	10	junction_12	116.642140279098	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTCATTTCTCCTTTCC	NA	False	NA	-15	True	AATAAA	-1	NA	86838864	86929746	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_86838980_86875866_86876086_86890061_86890225_86892126_86892230_86899793_86899891_86900026_86900127_86912239_86912385_86917133_86917327_86919171_86919470_86921519_86921696_86923375_86923507_86923593_86924642_86929299
H1_mix_00011028	chr10	+	297	3	NNC	ENSG00000122376.12	novel	3402	9	NA	NA	0	-46765	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_2	90	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGCTCTTGAACTCCTG	-3	True	NA	NA	False	NA	NA	NA	87095195	87104869	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_87095249_87096933_87096990_87104681
H1_mix_00011030	chr10	+	3699	13	FSM	ENSG00000198682.13	ENST00000456849.2	3699	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	44.2593367425325	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGAGTTTTTTCTGCCTG	15	True	NA	21	True	AATAAA	-15	NA	87659877	87747705	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_87660009_87709195_87709314_87713074_87713311_87714043_87714183_87714744_87714864_87714984_87715099_87715731_87715844_87721755_87721771_87727283_87727490_87741234_87741371_87743372_87743642_87745001_87745232_87745831
H1_mix_00011032	chr10	+	866	1	FSM	ENSG00000213613.2	ENST00000395256.2	523	1	-166	-177	-166	177	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCATCCCTGTAATCGTA	6016	False	NA	NA	False	AAGAAA	-22	NA	87945335	87946201	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_87945300_87946200
H1_mix_00011033	chr10	+	660	6	FSM	ENSG00000138182.15	ENST00000447580.1	660	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	105.907506816089	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAGAGAAAGAAGAAATTG	17	False	NA	NA	False	NA	NA	NA	89701678	89711090	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_89701718_89705293_89705442_89709166_89709254_89709344_89709462_89709926_89710066_89710960
H1_mix_00011036	chr10	+	635	10	FSM	ENSG00000148688.14	ENST00000277882.7	767	10	132	0	132	0	multi-exon	FALSE	canonical	3	11	junction_1	207.167195553689	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCAAGTTCTTCCAGTA	141	False	NA	NA	False	NA	NA	NA	90872114	90896392	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_90872135_90874868_90874925_90875557_90875615_90876023_90876099_90879062_90879135_90885811_90885902_90894774_90894892_90895453_90895484_90895879_90895918_90896312
H1_mix_00011037	chr10	+	7127	10	FSM	ENSG00000180628.15	ENST00000336126.6	7149	10	-54	76	-54	-68	multi-exon	FALSE	canonical	2	5	junction_4	17.1038945821279	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTATTGTTTGTCATCTT	-14	True	NA	15	True	ATTAAA	-17	NA	91220608	91284261	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_91220837_91222688_91222984_91240483_91240581_91248504_91248561_91248664_91248725_91251291_91251441_91261325_91261425_91264430_91264521_91271637_91271698_91278268
H1_mix_00011038	chr10	+	2003	14	FSM	ENSG00000095564.15	ENST00000471217.5	2003	14	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	28.6236547189113	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACTAGTGCAAAACTATG	NA	False	NA	-80	True	ATTAAA	-12	NA	91956620	91989395	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_91956658_91957224_91957294_91959064_91959283_91959784_91959881_91959977_91960155_91962537_91962679_91964076_91964202_91966636_91966758_91980453_91980559_91981642_91981793_91982082_91982226_91982586_91982762_91984200_91984405_91989153
H1_mix_00011040	chr10	+	1760	8	NNC	ENSG00000095596.12	novel	2117	7	NA	NA	0	27859	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1945.41922453328	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAACAAGATAATGTAA	1	True	NA	NA	False	ATTAAA	-33	NA	93073892	93105744	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_93074124_93074307_93074533_93074778_93075070_93075148_93075308_93075825_93075961_93076543_93076697_93076962_93077496_93105711
H1_mix_00011047	chr10	+	734	8	FSM	ENSG00000119969.15	ENST00000419900.5	711	8	-23	0	-21	0	multi-exon	FALSE	canonical	3	215	junction_1	103.882783236979	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTACCTTTTCAACAACC	0	True	NA	NA	False	ACTAAA	-37	NA	94545766	94574106	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_94545908_94546376_94546499_94554125_94554249_94558138_94558196_94562690_94562728_94562811_94562877_94571387_94571430_94573959
H1_mix_00011049	chr10	+	3054	22	NIC	ENSG00000119969.15	novel	3128	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	215	junction_1	76.2461403803661	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCATTAAATTATTTCTT	6	True	NA	17	True	AATAAA	-17	NA	94545815	94602098	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_94545908_94546376_94546499_94554125_94554249_94558138_94558196_94562690_94562728_94562811_94562877_94571387_94571430_94573959_94574188_94574553_94574737_94576661_94576806_94581325_94581523_94582962_94583060_94588228_94588391_94590412_94590553_94590637_94590777_94592228_94592313_94592394_94592515_94593498_94593616_94594694_94594855_94596859_94596957_94597034_94597112_94601527
H1_mix_00011053	chr10	+	4637	2	NNC	ENSG00000119969.15	novel	4987	10	NA	NA	-5069	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGACTGCTCGGTTAA	NA	False	NA	25	True	AATAAA	-19	NA	94585629	94613905	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_94585662_94609300
H1_mix_00011054	chr10	+	3310	2	Genic_Genomic	ENSG00000244332.1	novel	645	2	NA	NA	9456	2725	multi-exon	TRUE	canonical	1	97	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTACACAACTGATACCT	NA	False	NA	10	True	AATATA	-21	NA	94586894	94613963	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr10_+_94586973_94610731
H1_mix_00011056	chr10	+	1536	5	FSM	ENSG00000138185.20	ENST00000371206.6	1598	5	1	61	1	-61	multi-exon	FALSE	canonical	2	6	junction_3	2.95803989154981	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTACACTCCAGCCTGGG	NA	False	NA	NA	False	NA	NA	NA	95823236	95846335	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_95823365_95839690_95839809_95842343_95842495_95844475_95844636_95845356
H1_mix_00011057	chr10	+	704	8	FSM	ENSG00000188649.15	ENST00000423344.6	1241	8	3	534	3	-469	multi-exon	FALSE	canonical	1	2	junction_2	3.09047252182628	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACATTCTTTCCCAGTAA	65	False	NA	NA	False	AATAAA	-42	NA	95907967	95938189	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_95908058_95911300_95911360_95913381_95913438_95922015_95922077_95924313_95924391_95924778_95924845_95927236_95927333_95937990
H1_mix_00011058	chr10	+	8833	6	NIC	ENSG00000177853.15	novel	8294	6	NA	NA	3	687	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	17.1417618697729	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATGGCATTAGTGGAAAC	15	False	NA	NA	False	NA	NA	NA	96129737	96164448	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_96129993_96132585_96132671_96133582_96133649_96155325_96155377_96155923_96156048_96156196
H1_mix_00011064	chr10	+	1948	12	NNC	ENSG00000171307.19	novel	1977	12	NA	NA	-11	10239	at_least_one_novel_splicesite	FALSE	canonical	1	22	junction_11	191.639813665684	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAGAATATTTTAAAGGA	-6	True	NA	NA	False	NA	NA	NA	97446158	97467609	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_97446354_97451670_97451919_97452089_97452285_97452414_97452504_97452894_97452924_97453529_97453664_97453798_97453847_97454713_97454800_97455659_97455784_97455973_97456045_97456776_97457351_97467454
H1_mix_00011065	chr10	+	1900	11	NNC	ENSG00000171307.19	novel	1798	11	NA	NA	-11	10239	at_least_one_novel_splicesite	FALSE	canonical	1	22	junction_10	181.850378058447	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAGAATATTTTAAAGGA	-6	True	NA	NA	False	NA	NA	NA	97446158	97467609	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_97446354_97451670_97451919_97452089_97452285_97452414_97452504_97452894_97452924_97453529_97453664_97454713_97454800_97455659_97455784_97455973_97456045_97456776_97457351_97467454
H1_mix_00011070	chr10	+	789	3	FSM	ENSG00000155254.13	ENST00000421644.2	789	3	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_1	248.5	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAACTTAGCTGTGTACT	744	False	NA	NA	False	NA	NA	NA	97714693	97717479	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_97715071_97715859_97715986_97717193
H1_mix_00011071	chr10	+	1797	3	ISM	ENSG00000155254.13	ENST00000434038.6	690	4	1177	-525	0	2	3prime_fragment	FALSE	canonical	3	43	junction_1	233	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTTCTGTCCTGGT	744	False	NA	29	True	GATAAA	-23	NA	97714693	97718152	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_+_97715406_97715859_97715986_97717193
H1_mix_00011072	chr10	+	3019	12	NIC	ENSG00000155256.18	novel	3045	13	NA	NA	0	-8	combination_of_known_junctions	FALSE	canonical	3	46	junction_7	31.6107524336497	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCTTCTTGTTTTTGTCA	-36	True	NA	6	True	AATAAA	-8	NA	97737120	97760887	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_97737322_97738476_97738675_97743093_97743165_97744728_97744916_97748268_97748365_97749473_97749587_97750330_97750471_97751375_97751463_97753037_97753183_97757264_97757312_97757641_97757724_97759235
H1_mix_00011073	chr10	+	3028	12	NNC	ENSG00000155256.18	novel	3045	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_8	51.6073862353984	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTTGTCATGTCTTTG	-36	True	NA	14	True	AATAAA	-16	NA	97737120	97760895	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_97737326_97738476_97738675_97743093_97743165_97744728_97744916_97748268_97748365_97749473_97749587_97750330_97750471_97751375_97751463_97753040_97753183_97757264_97757312_97757641_97757724_97759235
H1_mix_00011075	chr10	+	3052	13	FSM	ENSG00000155256.18	ENST00000423811.3	3045	13	-7	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	57.3504698227389	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTTGTCATGTCTTTG	-36	True	NA	14	True	AATAAA	-16	NA	97737120	97760895	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_97737326_97738476_97738675_97743093_97743165_97744728_97744916_97748268_97748365_97749473_97749587_97750330_97750471_97751375_97751463_97752856_97752878_97753037_97753183_97757264_97757312_97757641_97757724_97759235
H1_mix_00011077	chr10	+	3049	13	FSM	ENSG00000155256.18	ENST00000393677.8	3047	13	-2	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	55.2742530981248	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTGTGTTGGCATTTT	-36	True	NA	26	True	AATAAA	-28	NA	97737120	97760907	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_97737326_97738476_97738675_97743093_97743165_97744728_97744916_97748268_97748365_97749473_97749587_97750330_97750471_97751390_97751463_97752856_97752878_97753037_97753183_97757264_97757312_97757641_97757724_97759235
H1_mix_00011082	chr10	+	275	1	FSM	ENSG00000230224.1	ENST00000453578.1	825	1	87	463	87	-463	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCAAGTCAGTGGTGGCT	NA	False	NA	NA	False	NA	NA	NA	100248357	100248632	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_100248400_100248600
H1_mix_00011084	chr10	+	6711	20	NNC	ENSG00000119906.13	novel	6892	20	NA	NA	145	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_4	19.0980847758424	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTTTGGTAATATTTG	174	False	NA	9	True	ATTAAA	-22	NA	100913140	100965134	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_100913251_100915998_100916043_100916569_100917301_100918383_100918442_100923977_100924973_100925948_100926020_100929316_100929440_100929829_100929998_100930975_100931079_100937401_100937478_100938594_100938737_100944025_100944129_100945329_100945507_100947038_100947137_100947759_100947848_100950075_100950208_100950675_100950754_100956450_100956538_100959427_100959497_100961876
H1_mix_00011085	chr10	+	4094	14	FSM	ENSG00000095539.15	ENST00000210633.3	4094	14	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_10	4.06456763496089	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTATGACTAGTCTGCTTC	3272	False	NA	29	True	AATAAA	-17	NA	100972834	100985615	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_100973037_100973128_100973278_100973546_100973610_100977631_100977731_100978294_100978389_100978526_100978641_100978848_100979019_100979101_100979272_100979847_100979993_100980121_100980345_100980577_100980694_100980821_100980998_100981167_100981230_100983304
H1_mix_00011087	chr10	+	3740	5	FSM	ENSG00000107815.10	ENST00000643860.1	3722	5	-19	1	0	-1	multi-exon	FALSE	canonical	0	0	junction_3	45.4498349831988	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTGTTTCTGTGCTTTT	-17	True	NA	11	True	ACTAAA	-14	NA	100987535	100994400	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_100989454_100989643_100989885_100990435_100990664_100990868_100991011_100993189
H1_mix_00011089	chr10	+	2157	4	NIC	ENSG00000107816.17	novel	5741	4	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	3	51	junction_2	234.342105098982	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTGAATGTGCTGGATA	40	False	NA	NA	False	ATTAAA	-22	NA	100999852	101007833	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_100999953_101002496_101002947_101005457_101005716_101006484
H1_mix_00011092	chr10	+	2115	1	FSM	ENSG00000107821.15	ENST00000608812.1	665	1	-1570	120	-1474	-120	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCCTCTGCTGCAGCGGAC	2239	False	NA	NA	False	NA	NA	NA	101064824	101066939	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_101064800_101066900
H1_mix_00011093	chr10	+	6051	14	FSM	ENSG00000166167.18	ENST00000393441.8	6084	14	23	10	-13	-4	multi-exon	TRUE	canonical	2	12	junction_2	48.4886371121532	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTTCTAAGCGTCTTG	5	True	NA	12	True	ATTAAA	-2	NA	101354055	101557309	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_101354229_101430344_101430453_101479367_101479458_101521638_101521871_101526012_101526200_101531236_101531334_101532294_101532433_101532951_101533071_101534660_101534911_101535353_101535473_101536542_101536654_101538292_101538372_101550698_101550892_101553154
H1_mix_00011094	chr10	+	562	6	FSM	ENSG00000166171.13	ENST00000626968.2	541	6	-21	0	-21	0	multi-exon	FALSE	canonical	2	12	junction_5	230.459020218346	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGCCCACGCCAACTGC	-17	True	NA	NA	False	NA	NA	NA	101588287	101608902	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_101588401_101594657_101594739_101600737_101600863_101601202_101601337_101605139_101605213_101608866
H1_mix_00011095	chr10	+	904	7	FSM	ENSG00000166171.13	ENST00000370147.5	641	7	-48	-215	-32	0	multi-exon	FALSE	canonical	2	12	junction_5	218.585350734114	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGACTGCCCTCTTGTTC	-28	True	NA	32	True	AGTAAA	-24	NA	101588276	101609662	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_101588401_101594657_101594739_101600737_101600863_101601202_101601337_101605139_101605213_101608866_101608938_101609366
H1_mix_00011097	chr10	+	564	3	FSM	ENSG00000148840.11	ENST00000495914.1	564	3	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_1	37.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGATCTTGGTGAGTGG	7773	False	NA	NA	False	NA	NA	NA	102148392	102149317	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_102148695_102148816_102148939_102149177
H1_mix_00011098	chr10	+	3232	9	FSM	ENSG00000166197.17	ENST00000603946.5	3217	9	-15	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	444.154657045268	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTGGGAGTTTTATT	-3	True	NA	11	True	AATAAA	-16	NA	102152388	102163866	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_102152531_102159192_102159309_102159432_102159569_102159895_102160025_102160232_102160344_102160451_102161094_102161555_102161663_102161832_102161926_102162110
H1_mix_00011102	chr10	+	6099	38	FSM	ENSG00000107862.7	ENST00000677618.1	6094	38	-5	0	-5	0	multi-exon	FALSE	canonical	2	3	junction_12	27.8012091743485	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTACCAGCATCATTGTCT	-15	True	NA	24	True	AATAAA	-6	NA	102245515	102382885	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_102245782_102258928_102259035_102260049_102260117_102344050_102344183_102351255_102351375_102351842_102351952_102352457_102352519_102353599_102353655_102358038_102358187_102358505_102358730_102359269_102359436_102360183_102360396_102362474_102362665_102363255_102363397_102363709_102363799_102365396_102365600_102366382_102366507_102367084_102367211_102367477_102367561_102368217_102368455_102368738_102368833_102369210_102369388_102369710_102369776_102369860_102369985_102370173_102370246_102370383_102370479_102370706_102370861_102375358_102375585_102376271_102376433_102376559_102376801_102376934_102377129_102379283_102379435_102379520_102379652_102379852_102379955_102380248_102380363_102380505_102380687_102381126_102381256_102382055
H1_mix_00011104	chr10	+	5006	29	NIC	ENSG00000107862.7	novel	6391	40	NA	NA	5	-1	intron_retention	FALSE	canonical	0	0	junction_12	31.7405578117979	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTACCAGCATCATTGTC	NA	False	NA	23	True	AATAAA	-5	NA	102359274	102382884	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_102359436_102360183_102360396_102361021_102361121_102361717_102361913_102362474_102362665_102363255_102363397_102363709_102363799_102365396_102365600_102366382_102366507_102367084_102367211_102367477_102367561_102368217_102368455_102369210_102369388_102369710_102369776_102369860_102369985_102370173_102370246_102370383_102370479_102370706_102370861_102375358_102375585_102376271_102376433_102376559_102376801_102376934_102377129_102379283_102379435_102379520_102379652_102379852_102379955_102380248_102380363_102380505_102380687_102381126_102381256_102382055
H1_mix_00011107	chr10	+	3015	23	FSM	ENSG00000077150.20	ENST00000661543.1	3015	23	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	11.6286373497315	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGCCCCTGATGTGACT	-6	True	NA	29	True	AATAAA	-42	NA	102395704	102402524	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_102395797_102395887_102395981_102396252_102396335_102396448_102396490_102396724_102396824_102396903_102397056_102397301_102397409_102397526_102397686_102397980_102398086_102398211_102398298_102398384_102398524_102398738_102398865_102399287_102399498_102399576_102399719_102400079_102400195_102400277_102400492_102400654_102400825_102400946_102401050_102401179_102401332_102401448_102401519_102401744_102401918_102402047_102402160_102402251
H1_mix_00011108	chr10	+	901	5	NNC	ENSG00000107872.14	novel	1340	4	NA	NA	31	-9	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	82.8322853723112	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTACCCCCTCTTGCCTGGT	36	False	NA	17	True	AATAAA	-7	NA	102420871	102423127	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_102420958_102421051_102421183_102421353_102421508_102422086_102422293_102422803
H1_mix_00011109	chr10	+	1483	5	FSM	ENSG00000269609.6	ENST00000663480.1	1483	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	41.9195658374464	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAACTTGTCTTGTTTT	13	True	NA	-4	True	NA	NA	NA	102449869	102456267	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_102450023_102450186_102450331_102451398_102451556_102452089_102452188_102455336
H1_mix_00011111	chr10	+	2453	1	FSM	ENSG00000269609.6	ENST00000598368.1	2453	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGTTTGTGGTGATTTG	3179	False	NA	21	True	AATAAA	-19	NA	102453839	102456292	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_102453800_102456300
H1_mix_00011115	chr10	+	1839	11	FSM	ENSG00000107882.12	ENST00000369899.6	1839	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_10	17.7045191970864	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAAGGCCTGTGTTATGG	-7	True	NA	10	True	AATAAA	-24	NA	102504006	102619462	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_102504335_102509168_102509304_102549969_102550107_102592581_102592725_102593635_102593722_102593992_102594066_102597139_102597294_102599432_102599545_102615267_102615403_102617289_102617429_102619065
H1_mix_00011116	chr10	+	3064	5	FSM	ENSG00000171206.15	ENST00000302424.12	3048	5	-16	0	0	0	multi-exon	FALSE	canonical	1	48	junction_1	48.5869066724771	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCTAGAGCACACACCAAA	0	True	NA	-39	True	NA	NA	NA	102644478	102658262	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_102645188_102654652_102654749_102655079_102655314_102656105_102656138_102656269
H1_mix_00011119	chr10	+	406	1	FSM	ENSG00000235376.5	ENST00000441178.2	2130	1	221	1503	221	-1503	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCGATGGTGGAGTAGGT	124	False	NA	NA	False	NA	NA	NA	103246107	103246513	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_103246100_103246500
H1_mix_00011122	chr10	+	717	2	FSM	ENSG00000148843.15	ENST00000478543.1	717	2	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGCTTGCTTTATTTTCA	NA	False	NA	20	True	TTTAAA	-6	NA	103444312	103445724	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_103444683_103445377
H1_mix_00011123	chr10	+	7323	20	NNC	ENSG00000065613.15	novel	7827	19	NA	NA	-83	41	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	46.7313296891415	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCCTGCCTGAGAACACT	NA	False	NA	52	True	NA	NA	NA	103967056	104029274	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_103967082_103967709_103967896_103990674_103990840_103992597_103992647_103992983_103993134_103998898_103998972_103999118_103999314_103999866_103999949_104001443_104001573_104002171_104003528_104005560_104005692_104005911_104006036_104008176_104008357_104010815_104010909_104018159_104018290_104018783_104018909_104019733_104019923_104020487_104020614_104021619_104021734_104025573
H1_mix_00011126	chr10	+	547	5	FSM	ENSG00000148834.13	ENST00000470554.5	547	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	397.545201832446	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGTGCATAAGAAATTTC	NA	False	NA	NA	False	NA	NA	NA	104235355	104259798	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_104235437_104252165_104252190_104254463_104254574_104255162_104255272_104259575
H1_mix_00011128	chr10	+	1051	4	NIC	ENSG00000065621.15	novel	6423	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	27	junction_2	47.5254317883243	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTATTCTTCTGATAAT	-1	True	NA	11	True	AATAAA	-12	NA	104274897	104299411	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_104275335_104277893_104278117_104297577_104297685_104299127
H1_mix_00011129	chr10	+	2711	2	FSM	ENSG00000065621.15	ENST00000498052.1	2694	2	-17	0	-17	0	multi-exon	FALSE	canonical	3	137	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTATTCTTCTGATAAT	1671	False	NA	11	True	AATAAA	-12	NA	104295257	104299411	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_104297685_104299127
H1_mix_00011131	chr10	+	911	4	Intergenic	novelGene_213	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_2	36.0832371053374	107	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGCATTCTTTGGTTTA	NA	False	NA	NA	False	AATGAA	-1	NA	107367749	107479262	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr10_+_107367934_107379595_107379720_107477756_107477886_107478788
H1_mix_00011132	chr10	+	676	6	FSM	ENSG00000148700.15	ENST00000468251.5	697	6	21	0	21	0	multi-exon	FALSE	canonical	1	6	junction_1	213.739093288991	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGGTTGACCAGGGAAGT	20	True	NA	NA	False	AATATA	-8	NA	109996388	110118608	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_109996447_110100624_110100849_110112776_110112916_110116258_110116411_110117341_110117423_110118586
H1_mix_00011133	chr10	+	763	7	FSM	ENSG00000148700.15	ENST00000497125.5	763	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	234.314425505559	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATTTGAAAATTGACCATA	1	True	NA	NA	False	AATATA	-30	NA	110008230	110118630	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_110008300_110100624_110100849_110105999_110106054_110112776_110112916_110116258_110116411_110117341_110117423_110118586
H1_mix_00011134	chr10	+	596	2	FSM	ENSG00000148700.15	ENST00000488837.1	590	2	-6	0	-6	0	multi-exon	FALSE	canonical	3	507	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAGCGTGAAAAAACAAGAT	5525	False	NA	NA	False	AATACA	-14	NA	110121848	110124168	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_110122293_110124016
H1_mix_00011135	chr10	+	672	4	FSM	ENSG00000148700.15	ENST00000472568.5	672	4	0	0	0	0	multi-exon	FALSE	canonical	3	468	junction_1	82.4998316496599	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCACCAGCTCCTCCTAA	859	False	NA	NA	False	NA	NA	NA	110123836	110130389	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_110124275_110125825_110125946_110126416_110126504_110130362
H1_mix_00011139	chr10	+	3695	8	FSM	ENSG00000108061.13	ENST00000265277.10	3751	8	6	50	-1	24	multi-exon	TRUE	canonical	1	2	junction_2	71.0067544933119	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTAAAATTTTGTTTATAA	-4	True	NA	-35	True	NA	NA	NA	110919605	111013616	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_110919658_110964124_110965062_111000414_111000546_111004605_111004795_111007530_111007654_111009247_111009386_111009712_111009831_111011609
H1_mix_00011140	chr10	+	2920	8	FSM	ENSG00000108061.13	ENST00000689997.1	3581	8	46	615	2	-10	multi-exon	FALSE	canonical	3	18	junction_1	66.2364348838496	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTACCTAGAGCTTGTGT	11	True	NA	4	True	TATAAA	-19	NA	110919620	111013655	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_110919658_110985627_110985766_111000414_111000546_111004605_111004795_111007530_111007654_111009247_111009386_111009712_111009831_111011609
H1_mix_00011141	chr10	+	2967	7	ISM	ENSG00000108061.13	ENST00000265277.10	3751	8	45251	0	-181	0	3prime_fragment	FALSE	canonical	1	2	junction_1	74.2505144015103	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGTGTGTTTGTGTGGT	660	False	NA	15	True	TATAAA	-30	NA	110964850	111013666	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_+_110965062_111000414_111000546_111004605_111004795_111007530_111007654_111009247_111009386_111009712_111009831_111011609
H1_mix_00011145	chr10	+	625	1	FSM	ENSG00000279315.1	ENST00000624062.1	1286	1	50	611	50	-611	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGAATATTACCTTTTAC	NA	False	NA	NA	False	NA	NA	NA	112831218	112831843	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_112831200_112831800
H1_mix_00011147	chr10	+	3872	12	NIC	ENSG00000148737.17	novel	1755	13	NA	NA	19	-4	combination_of_known_junctions	FALSE	canonical	3	30	junction_7	69.8886954525989	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGGCTGGTCACTTGTTT	12	True	NA	15	True	AATAAA	-21	NA	112950268	113167674	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150982_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113165554
H1_mix_00011148	chr10	+	3986	13	NIC	ENSG00000148737.17	novel	1979	13	NA	NA	19	-4	combination_of_known_junctions	FALSE	canonical	2	10	junction_4	94.7593443061598	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGGCTGGTCACTTGTTT	12	True	NA	15	True	AATAAA	-21	NA	112950268	113167674	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113089399_113089541_113141183_113141317_113143922_113144014_113146010_113146098_113150997_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113165554
H1_mix_00011153	chr10	+	2446	8	FSM	ENSG00000165806.21	ENST00000345633.8	2659	8	213	0	-30	0	multi-exon	FALSE	canonical	0	0	junction_1	12.9473029261397	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGTCCAGTTTGCTTTC	-5	True	NA	13	True	ATTAAA	-21	NA	113679881	113730903	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_113679979_113691996_113692071_113697493_113697604_113721031_113721169_113721650_113721780_113725361_113725538_113726304_113726435_113729310
H1_mix_00011155	chr10	+	5730	16	ISM	ENSG00000151553.15	ENST00000369248.9	5774	17	139	5	139	-5	intron_retention	FALSE	canonical	3	61	junction_3	12.8312119458764	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAACGTCTTATGTTTTTG	136	False	NA	NA	False	AATAAA	-15	NA	114821918	114864712	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_+_114822124_114830851_114830931_114833232_114833403_114835536_114835642_114836123_114836247_114842932_114843227_114843740_114843938_114845366_114845482_114846012_114846090_114846174_114846368_114846558_114846729_114847089_114847234_114848646_114848738_114855196_114855341_114860748_114860890_114861230
H1_mix_00011156	chr10	+	8849	29	FSM	ENSG00000107518.18	ENST00000355044.8	8746	29	-117	14	-117	-14	multi-exon	FALSE	canonical	1	4	junction_26	19.8413027777504	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCCACTGCCAAATGCAGT	66	False	NA	9	True	AATAAA	-18	NA	115093247	115948985	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_115094044_115120184_115120269_115121698_115121813_115127592_115127722_115129326_115129536_115160039_115160215_115165557_115165646_115171036_115171293_115215696_115215881_115241570_115241726_115265192_115265278_115266796_115267006_115268325_115268445_115281354_115281488_115286215_115286398_115300033_115300248_115301854_115302044_115315517_115315737_115334281_115334420_115394658_115394753_115426249_115426303_115461940_115462036_115467173_115467253_115469171_115469330_115519262_115519325_115549457_115549537_115727247_115727356_115847876_115847992_115944657
H1_mix_00011157	chr10	+	1583	7	FSM	ENSG00000107518.18	ENST00000527407.5	1583	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_6	19.8277303009923	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAATGTTTTTCTCTTTA	7	True	NA	-25	True	NA	NA	NA	115093462	115171327	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_115094044_115120184_115120269_115121698_115121813_115127592_115127722_115129326_115129536_115160039_115160215_115171036
H1_mix_00011158	chr10	+	648	6	FSM	ENSG00000107518.18	ENST00000526373.1	648	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	5.53534100123922	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAGCAAACCCAGAACAGG	NA	False	NA	NA	False	CATAAA	-4	NA	115300230	115462016	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_115300248_115301854_115302044_115315517_115315737_115394658_115394753_115426249_115426303_115461940
H1_mix_00011176	chr10	+	3832	13	NIC	ENSG00000107679.15	novel	3741	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	124	junction_12	57.9215825251885	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTCATTTTGTTTGGTT	-30	True	NA	23	True	AATAAA	-24	NA	122374695	122432354	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_122374807_122392302_122392373_122393180_122393342_122397917_122397975_122400342_122400389_122406575_122406674_122412919_122413046_122415858_122416003_122417899_122417969_122424198_122424264_122424895_122424960_122426941_122427032_122429623
H1_mix_00011193	chr10	+	444	2	FSM	ENSG00000151640.13	ENST00000471544.1	444	2	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACATCACCTCTCTCTCC	9979	False	NA	NA	False	NA	NA	NA	132203552	132204907	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_132203928_132204838
H1_mix_00011200	chr10	+	2366	3	NNC	ENSG00000151650.8	novel	2459	3	NA	NA	40	-5	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	14	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCACCGCCCGTGGAGATT	38	False	NA	1	True	GATAAA	-13	NA	133237894	133241923	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_133238156_133239723_133239837_133239931
H1_mix_00011203	chr10	+	2876	6	FSM	ENSG00000148824.19	ENST00000498790.5	693	6	-140	-2043	-10	0	multi-exon	FALSE	canonical	3	488	junction_5	28.045677028733	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTCAGGACAGACCTGAGT	4769	False	NA	NA	False	NA	NA	NA	133394083	133401847	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_133394333_133395712_133395778_133396162_133396268_133398434_133398516_133399169_133399227_133399528
H1_mix_00011211	chr10	-	3422	1	FSM	ENSG00000205740.2	ENST00000615314.1	3104	1	5	-323	5	323	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTGCAATGGTGTGATC	-1	True	NA	NA	False	NA	NA	NA	988324	984902	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_984900_988300
H1_mix_00011216	chr10	-	3781	27	FSM	ENSG00000107959.17	ENST00000677384.1	3966	27	185	0	172	0	multi-exon	TRUE	canonical	1	1	junction_26	32.6863569244736	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAACCTCTGCTTGAGTC	175	False	NA	-10	True	AATAAA	-12	NA	3172607	3137733	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_3138125_3138234_3138338_3138903_3139050_3140686_3140813_3143388_3143502_3144291_3144367_3145595_3145717_3147149_3147251_3147571_3147738_3147986_3148064_3148170_3148292_3149620_3149754_3151246_3151364_3155590_3155730_3156929_3157065_3157434_3157532_3158039_3158154_3158913_3159043_3159847_3159937_3160203_3160331_3163724_3163886_3165237_3165335_3165412_3165528_3166228_3166381_3166935_3167043_3170103_3170207_3172181
H1_mix_00011217	chr10	-	3203	25	FSM	ENSG00000107959.17	ENST00000677305.1	3197	25	0	-6	0	0	multi-exon	FALSE	canonical	2	5	junction_21	41.8329805762019	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAACCTCTGCTTGAGTC	NA	False	NA	-10	True	AATAAA	-12	NA	3172806	3137733	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_3138125_3138234_3138338_3138903_3139050_3140686_3140813_3143388_3143502_3144291_3144367_3145595_3145717_3147149_3147251_3147571_3147738_3149620_3149754_3151246_3151364_3155590_3155730_3156929_3157065_3157434_3157532_3158039_3158154_3158913_3159043_3159847_3159937_3160203_3160331_3163724_3163886_3165237_3165335_3165412_3165484_3166228_3166381_3166935_3167043_3170103_3170207_3172716
H1_mix_00011220	chr10	-	1549	7	NIC	ENSG00000107959.17	novel	1680	14	NA	NA	6	323	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	55.1291413158433	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTATTTCTTATTCCAT	9	True	NA	4	True	AATAAA	-17	NA	3172773	3162925	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_3163886_3165237_3165335_3165412_3165528_3166228_3166381_3166977_3167043_3170103_3170207_3172716
H1_mix_00011226	chr10	-	1785	7	NNC	ENSG00000134461.16	novel	1646	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_6	29.9666481275434	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGAGGAGGCAATAAAGT	11	True	NA	-34	True	NA	NA	NA	5889871	5878121	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_5878288_5880297_5880377_5883005_5883168_5883968_5884078_5885722_5885766_5887846_5888242_5889040
H1_mix_00011230	chr10	-	566	4	FSM	ENSG00000198879.13	ENST00000682180.1	566	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	2.86744175568088	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCGCGGATTTGCACCCCG	2	True	NA	NA	False	NA	NA	NA	7411488	7367713	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_7367890_7370280_7370376_7381798_7381950_7411344
H1_mix_00011239	chr10	-	1565	10	NNC	ENSG00000107537.14	novel	1541	9	NA	NA	0	3560	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	133.154695146308	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGGACTGTCATGGCTGG	-3	True	NA	NA	False	NA	NA	NA	13300064	13274235	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_13274262_13277800_13278355_13280975_13281111_13283689_13283840_13288359_13288542_13291830_13291913_13294427_13294597_13295495_13295607_13298186_13298246_13299967
H1_mix_00011246	chr10	-	544	2	FSM	ENSG00000065809.14	ENST00000491458.1	425	2	-119	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGCCACTGGACGCTT	1008	False	NA	-14	True	AATAAA	-18	NA	14604389	14602456	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_14602851_14604239
H1_mix_00011248	chr10	-	960	6	FSM	ENSG00000152457.18	ENST00000492201.5	960	6	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	14.5134420452214	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGAGAATATTCCTGCCT	NA	False	NA	NA	False	NA	NA	NA	14928082	14908741	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_14909331_14919737_14919833_14920379_14920445_14922980_14923070_14926842_14926898_14928015
H1_mix_00011250	chr10	-	675	4	FSM	ENSG00000152465.18	ENST00000486786.1	675	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	30.739045022396	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTAGGACTTTACTTCC	NA	False	NA	16	True	AGTAAA	-33	NA	15119385	15106372	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_15106699_15109701_15109840_15112795_15112964_15119342
H1_mix_00011257	chr10	-	3511	13	NIC	ENSG00000241058.4	novel	2166	11	NA	NA	0	33040	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	33.7206662646712	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAGGACAGTGTGAA	26	True	NA	NA	False	AATACA	-40	NA	18651587	18512520	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_18513661_18542068_18542178_18545464_18546146_18548111_18548238_18551822_18551972_18585948_18586094_18596207_18596328_18609844_18609927_18614459_18614614_18616183_18616294_18642475_18642556_18648489_18648646_18651128
H1_mix_00011264	chr10	-	1792	12	NNC	ENSG00000136770.11	novel	2100	12	NA	NA	-77	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	51.8561264581117	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGTGCTATACTGTTTA	275	False	NA	-11	True	AATAAA	-15	NA	22003476	21756547	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_21756756_21759169_21759619_21766260_21766310_21805979_21806100_21882281_21882386_21904521_21904613_21918778_21918873_21919831_21919930_21920797_21920964_21928505_21928553_21929039_21929142_22003212
H1_mix_00011270	chr10	-	3994	20	FSM	ENSG00000136758.20	ENST00000326799.7	3994	20	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_17	321.765584568553	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGCTGTATATGGTCTT	1625	False	NA	NA	False	ATTAAA	-23	NA	27154359	27110453	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_27112121_27114520_27114608_27116059_27116134_27116218_27116346_27117575_27117728_27119293_27119450_27120434_27120548_27121385_27121449_27122840_27122974_27123546_27123700_27126695_27126787_27131858_27131942_27134038_27134123_27134830_27134982_27136275_27136386_27142386_27142486_27145427_27145591_27147497_27147669_27148905_27149041_27154177
H1_mix_00011274	chr10	-	7275	39	FSM	ENSG00000197321.16	ENST00000674475.1	7275	39	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_29	21.7600392343218	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATTAACTGGTTCACATT	5	True	NA	-27	True	AATAAA	-19	NA	29736959	29457360	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_29458334_29458433_29458590_29462276_29462402_29463491_29463636_29465594_29465751_29467741_29467876_29470275_29470484_29471137_29471244_29473837_29473990_29480536_29480814_29481583_29481729_29484655_29484832_29486084_29486231_29486409_29486558_29487162_29487300_29488600_29488757_29490846_29491020_29493213_29493392_29494913_29495001_29495091_29495182_29499115_29499264_29512734_29512862_29522409_29522636_29523450_29524028_29524471_29524716_29526960_29527057_29529704_29529845_29530606_29530669_29531253_29531289_29532001_29532173_29535988_29536070_29550596_29551264_29554782_29554935_29555050_29555109_29563200_29563293_29569254_29569313_29657968_29658069_29686552_29686652_29736684
H1_mix_00011279	chr10	-	5591	17	NIC	ENSG00000099250.18	novel	5640	17	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	32	junction_6	42.757263637305	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACACCTGATGGCTTTTAT	1589	False	NA	NA	False	ATTAAA	-18	NA	33334642	33177495	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_33180366_33182697_33182749_33185627_33185725_33186216_33186489_33192280_33192419_33197649_33197710_33202911_33202996_33207571_33207717_33213385_33213718_33221718_33221864_33226133_33226290_33254027_33254195_33256315_33256472_33263645_33263874_33270674_33270857_33330707_33330883_33334309
H1_mix_00011281	chr10	-	3709	11	FSM	ENSG00000099250.18	ENST00000374823.9	3737	11	0	28	0	-28	multi-exon	FALSE	canonical	3	112	junction_1	12.8019529760111	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTACATATTAGCATGGT	1849	False	NA	NA	False	AAGAAA	-19	NA	33334382	33201045	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_33202996_33207571_33207717_33213385_33213718_33221718_33221864_33226133_33226290_33254027_33254195_33256315_33256472_33263645_33263874_33270674_33270857_33330707_33330883_33334309
H1_mix_00011286	chr10	-	3443	20	NIC	ENSG00000148498.16	novel	3395	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_4	71.4498836428456	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTAGTGGCTGTTGAC	2	True	NA	NA	False	AATAAA	-14	NA	34815296	34312263	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_34312383_34317106_34317339_34331116_34331345_34336198_34336244_34337277_34337427_34341626_34341817_34347964_34348116_34359146_34359318_34360070_34360260_34374873_34375003_34377966_34378107_34382539_34382923_34384128_34384255_34399329_34399414_34401825_34401918_34450316_34450449_34470084_34470264_34516978_34517160_34696317_34696420_34814875
H1_mix_00011287	chr10	-	3165	19	NIC	ENSG00000148498.16	novel	3364	20	NA	NA	44	-15	combination_of_known_junctions	FALSE	canonical	3	54	junction_4	74.8991915102486	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTACTTTTAATGAATTC	46	False	NA	NA	False	TTTAAA	-10	NA	34815252	34312278	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_34312383_34317106_34317339_34331116_34331345_34336198_34336244_34337364_34337427_34341626_34341817_34347964_34348116_34359146_34359318_34360070_34360260_34374873_34375003_34377966_34378107_34382539_34382923_34384128_34384255_34399329_34399414_34401825_34401918_34470084_34470264_34516978_34517160_34696317_34696420_34814875
H1_mix_00011288	chr10	-	6102	16	NIC	ENSG00000148498.16	novel	799	5	NA	NA	-204	3098	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	79.3295237180543	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCCACCTTATTGATGAA	NA	False	NA	NA	False	AAAAAG	-44	NA	34815529	34343099	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_34346450_34347964_34348116_34359146_34359318_34360070_34360260_34372497_34372537_34374873_34375003_34377966_34378107_34382539_34382923_34384128_34384255_34399329_34399414_34401825_34401918_34450316_34450449_34470084_34470264_34516978_34517160_34696317_34696420_34814875
H1_mix_00011292	chr10	-	4050	1	FSM	ENSG00000177283.8	ENST00000374694.3	4050	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	209	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTCTGGAGTCCGTGA	-1	True	NA	-3	True	ACTAAA	-18	NA	35642296	35638246	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_35638200_35642300
H1_mix_00011295	chr10	-	1653	8	NIC	ENSG00000198105.16	novel	1286	7	NA	NA	21	-207	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	48.7291556693208	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTTAAGTGTTTCTGTTT	26	True	NA	-9	True	AATAAA	-17	NA	37857589	37828971	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_37829684_37831231_37831313_37833024_37833117_37837616_37837713_37837984_37838112_37856295_37856338_37856434_37856533_37857184
H1_mix_00011301	chr10	-	2929	5	FSM	ENSG00000234420.8	ENST00000473592.1	2929	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	7.28010988928052	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTATATGTCATTTTTT	18	False	42552826	NA	False	AATATA	-16	NA	42552808	42520822	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_42521128_42523181_42523306_42523611_42523739_42525539_42525661_42550556
H1_mix_00011307	chr10	-	1987	2	FSM	ENSG00000165507.9	ENST00000298295.4	2120	2	0	133	0	-133	multi-exon	FALSE	canonical	2	2	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTTTCCTTATCTA	0	True	NA	0	True	ATTAAA	-24	NA	44978809	44976260	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_44978056_44978617
H1_mix_00011308	chr10	-	6104	8	NIC	ENSG00000165406.16	novel	5615	8	NA	NA	19	-3	combination_of_known_junctions	TRUE	canonical	2	3	junction_4	34.0072021183509	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTTTTGCCATGAGAGTG	15	True	NA	-3	True	AATAAA	-16	NA	45594887	45454587	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_45458544_45459119_45459268_45461230_45461412_45463150_45463997_45464238_45464328_45489366_45489418_45533109_45533290_45594234
H1_mix_00011310	chr10	-	4760	8	FSM	ENSG00000188234.15	ENST00000616763.6	2535	8	-2223	-2	-2223	2	multi-exon	FALSE	canonical	3	62	junction_7	10.5830052442584	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCACCTCTTTTTCATT	NA	False	NA	-6	True	AATAAA	-30	NA	45849723	45825591	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_45827391_45828028_45828081_45831393_45831430_45834015_45834117_45841652_45841688_45844325_45844395_45846686_45846756_45847124
H1_mix_00011314	chr10	-	3478	11	NNC	ENSG00000266412.6	novel	2211	11	NA	NA	0	82573	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	190.193164966568	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	-6	True	NA	NA	False	NA	NA	NA	46030615	45922514	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_45922542_46005089_46006598_46009410_46009552_46010222_46011207_46012882_46013027_46013549_46013640_46014443_46014553_46014853_46014943_46015125_46015267_46016539_46016695_46030525
H1_mix_00011324	chr10	-	2066	1	FSM	ENSG00000279822.1	ENST00000624848.1	1985	1	-108	27	-108	-27	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAACAGAAATAGAAAGAA	5718	False	NA	NA	False	AATACA	-23	NA	48445928	48443862	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_48443900_48445900
H1_mix_00011325	chr10	-	2607	8	NIC	ENSG00000128805.15	novel	2340	8	NA	NA	-191	102	combination_of_known_junctions	FALSE	canonical	3	20	junction_6	23.3264324100277	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGGTGGAATAGCACAGG	3239	False	NA	90	True	NA	NA	NA	48524427	48445933	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_48446620_48450260_48451141_48453303_48453426_48454087_48454162_48455001_48455135_48459683_48459892_48479635_48479765_48524052
H1_mix_00011328	chr10	-	3122	6	NIC	ENSG00000198964.14	novel	3717	11	NA	NA	308	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	46.2964361479369	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTTATTTCTACTGTG	290	False	NA	-13	True	AATAAA	-20	NA	50418170	50305599	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_50307322_50307981_50308149_50311261_50311416_50327204_50327323_50343491_50344346_50418063
H1_mix_00011335	chr10	-	686	3	FSM	ENSG00000289158.1	ENST00000690550.1	483	3	23	-226	23	226	multi-exon	FALSE	canonical	3	11	junction_1	16	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCAAACTAATCTATAGTG	14	True	NA	NA	False	ATTAAA	-10	NA	57222684	57101217	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_57101703_57108623_57108752_57222611
H1_mix_00011338	chr10	-	7074	45	NIC	ENSG00000151150.22	novel	7202	44	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_20	27.3651841905938	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCTCTACAGTCTCCT	189	False	NA	-6	True	AATAAA	-22	NA	60733311	60028400	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_60029827_60042671_60042757_60055657_60056037_60059339_60059431_60059697_60060007_60063110_60063255_60064156_60064289_60067934_60068010_60080536_60080619_60082614_60082738_60083491_60083618_60084601_60084831_60085156_60085254_60086676_60086885_60088146_60088359_60105904_60106060_60108829_60109055_60114224_60114332_60134270_60134374_60138963_60139088_60145967_60146022_60166590_60166654_60166823_60166897_60172307_60172404_60172899_60172999_60173087_60173187_60181328_60181428_60186714_60186913_60196144_60196244_60196526_60196626_60198339_60198538_60200128_60200228_60203001_60203101_60205791_60205891_60208035_60208234_60213411_60213511_60234687_60234787_60261858_60261958_60263834_60264021_60270130_60270230_60278773_60278873_60279049_60279149_60279537_60279640_60615185_60615225_60733262
H1_mix_00011345	chr10	-	2779	2	FSM	ENSG00000122877.18	ENST00000439032.6	3155	2	373	3	373	-3	multi-exon	FALSE	canonical	1	1	junction_1	0	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAGTGTAAATAAATACTT	3571	False	NA	NA	False	NA	NA	NA	62815656	62812025	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_62814469_62815320
H1_mix_00011346	chr10	-	8729	26	NNC	ENSG00000171988.20	novel	8149	25	NA	NA	0	53596	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	80.8866466111681	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGAGAGAAATGGACCA	-7	True	NA	NA	False	NA	NA	NA	63269253	63113624	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_63113653_63167224_63168135_63168434_63168567_63176296_63176474_63177716_63177857_63183446_63183570_63184607_63184739_63185562_63185654_63186214_63186384_63189167_63189447_63190893_63191109_63192937_63193152_63193344_63193473_63194285_63194376_63197410_63197564_63198512_63198728_63200475_63200678_63206594_63208802_63209062_63209236_63213472_63215152_63215262_63215456_63215552_63215697_63217206_63217332_63219877_63219984_63264650_63264765_63268662
H1_mix_00011347	chr10	-	8758	26	FSM	ENSG00000171988.20	ENST00000399262.7	8758	26	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_25	82.892663125273	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACTTTTTCCAGAGTACT	4	True	NA	-10	True	ATTAAA	-17	NA	63465977	63167224	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_63168135_63168434_63168567_63176296_63176474_63177716_63177857_63183446_63183570_63184607_63184739_63185562_63185654_63186214_63186384_63189167_63189447_63190893_63191109_63192937_63193152_63193344_63193473_63194285_63194376_63197410_63197564_63198512_63198728_63200475_63200678_63206594_63208802_63209062_63209236_63213472_63215152_63215262_63215456_63215552_63215697_63217206_63217332_63219877_63219984_63264650_63264765_63380317_63380483_63465494
H1_mix_00011351	chr10	-	875	1	FSM	ENSG00000213609.3	ENST00000452821.1	795	1	-5	-75	-5	75	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCAAGCCCAGGTCACCTT	17	False	NA	-1	True	ATTAAA	-29	NA	63903250	63902375	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_63902400_63903200
H1_mix_00011352	chr10	-	4450	26	FSM	ENSG00000148634.16	ENST00000395198.7	4445	26	0	-5	0	2	multi-exon	FALSE	canonical	2	6	junction_10	31.7042836222489	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGTGGTTCTCATATAAG	3	True	NA	-4	True	AATAAA	-26	NA	68075283	67921902	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_67923140_67925084_67925188_67932596_67932781_67936152_67936236_67939587_67939655_67940938_67941106_67954594_67954739_67954962_67955131_67956877_67956977_67959112_67959137_67966682_67966803_67988662_67988836_67990210_67990401_67990903_67991016_67991139_67991200_67992198_67992324_67992605_67992683_68014025_68014187_68025545_68025677_68032777_68032870_68033964_68034187_68038092_68038170_68044403_68044564_68072882_68073187_68073656_68073687_68075143
H1_mix_00011357	chr10	-	1137	1	FSM	ENSG00000179774.9	ENST00000373673.5	1519	1	540	-158	540	158	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTAATTTAAACATTTTC	537	False	NA	NA	False	AAAAAG	-17	NA	68231573	68230436	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_68230400_68231600
H1_mix_00011358	chr10	-	268	3	FSM	ENSG00000108187.16	ENST00000478192.1	587	3	0	319	0	-319	multi-exon	FALSE	canonical	3	11	junction_2	2	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGTGATTTTCTTTAAT	10	True	NA	NA	False	NA	NA	NA	68306829	68296265	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_68296365_68296885_68296986_68306760
H1_mix_00011359	chr10	-	405	5	FSM	ENSG00000204130.14	ENST00000463210.6	405	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	9.86154146165801	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACTTTTCTATTGAGAAT	NA	False	NA	NA	False	AATAAA	-13	NA	68364030	68341152	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_68341289_68346006_68346085_68355352_68355402_68363589_68363685_68363983
H1_mix_00011360	chr10	-	4431	18	FSM	ENSG00000204130.14	ENST00000388768.6	4502	18	71	0	71	0	multi-exon	FALSE	canonical	3	6	junction_17	8.72612907993706	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCTGCTTTAAAAGGGCAA	155	False	NA	-18	True	AATAAA	-39	NA	68407118	68343518	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_68345912_68346006_68346085_68355352_68355402_68363589_68363685_68363983_68364114_68376852_68376973_68379423_68379522_68381231_68381400_68383797_68383915_68384050_68384153_68386058_68386129_68393137_68393204_68394074_68394137_68394327_68394452_68396779_68396882_68401619_68401738_68404670_68404845_68406753
H1_mix_00011363	chr10	-	4044	20	NIC	ENSG00000138346.15	novel	4267	21	NA	NA	-12	-4	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_8	73.6835714257998	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATCTTAACTGTGTCAAT	NA	False	NA	-8	True	AATAAA	-14	NA	68471985	68414067	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_68415106_68416706_68416856_68419033_68419214_68419802_68419893_68422224_68422430_68422514_68422605_68422696_68422891_68430435_68430661_68431861_68431972_68432205_68432316_68432393_68432511_68442916_68443112_68444920_68445084_68446295_68446414_68450027_68450248_68459103_68459236_68465666_68465813_68468122_68468307_68469980_68470164_68471790
H1_mix_00011364	chr10	-	1172	7	FSM	ENSG00000138346.15	ENST00000440722.2	1172	7	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_3	34.4613309860971	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTCTTGAACTCCTGGG	NA	False	NA	NA	False	ATTAAA	-21	NA	68430607	68416614	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_68416856_68419033_68419214_68419802_68419893_68422224_68422430_68422514_68422605_68422696_68422891_68430435
H1_mix_00011366	chr10	-	941	2	Genic_Genomic	ENSG00000214881.4	novel	345	1	NA	NA	-107	3864	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATCTTGGCTAACACAGTA	NA	False	NA	NA	False	NA	NA	NA	68544940	68540624	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr10_-_68540654_68544028
H1_mix_00011367	chr10	-	2005	2	NNC	ENSG00000156521.14	novel	2620	4	NA	NA	0	-1225	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGTATTTATATATCAA	-11	True	NA	-18	True	AATAAA	-18	NA	70146676	70139207	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_70140142_70145605
H1_mix_00011369	chr10	-	2907	4	FSM	ENSG00000172731.15	ENST00000357631.6	2906	4	0	-1	0	0	multi-exon	FALSE	canonical	3	27	junction_1	31.2089730686545	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTGGTTGGTGTTTGA	-3	True	NA	-6	True	AATAAA	-17	NA	70382626	70298974	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_70301509_70340552_70340703_70376451_70376597_70382548
H1_mix_00011370	chr10	-	2914	3	NNC	ENSG00000156574.10	novel	2058	3	NA	NA	-776	636	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	76.5	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGTCATGGCCCAGAAAG	NA	False	NA	NA	False	NA	NA	NA	70442457	70431299	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_70433089_70435285_70435984_70442030
H1_mix_00011372	chr10	-	5220	11	FSM	ENSG00000107742.14	ENST00000373109.7	5224	11	0	4	0	-3	multi-exon	FALSE	canonical	0	0	junction_9	5.838664230798	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATCTGCTGGCAATACTC	9279	False	72088560	-4	True	AATAAA	-13	NA	72088551	72059037	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_72062906_72063024_72063163_72064177_72064241_72066901_72067121_72067612_72067733_72068186_72068302_72070311_72070427_72072143_72072259_72072502_72072549_72072901_72072911_72088139
H1_mix_00011374	chr10	-	1816	8	FSM	ENSG00000138303.18	ENST00000317168.11	1816	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	56.9980307572471	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTGGTCTATCATTTT	-16	True	NA	-11	True	ATTAAA	-17	NA	72216307	72096519	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_72097451_72133056_72133182_72161537_72161675_72196810_72196990_72203426_72203525_72210731_72210832_72213186_72213332_72216206
H1_mix_00011375	chr10	-	1902	9	NIC	ENSG00000138303.18	novel	2479	10	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	43.4840128667997	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTTGCTTGGTCTATCA	14	True	NA	-15	True	ATTAAA	-13	NA	72216277	72096523	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_72097451_72133056_72133182_72152868_72152989_72161537_72161675_72196810_72196990_72203426_72203525_72210731_72210832_72213186_72213332_72216206
H1_mix_00011376	chr10	-	770	7	FSM	ENSG00000107745.20	ENST00000603011.5	774	7	0	4	0	0	multi-exon	FALSE	canonical	0	0	junction_6	108.774486387612	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGTTGTCCTGGAGAGTT	-1	True	NA	NA	False	NA	NA	NA	72626078	72477173	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_72477257_72508154_72508270_72533745_72533790_72551178_72551342_72562894_72563064_72566632_72566760_72626009
H1_mix_00011379	chr10	-	1932	13	NIC	ENSG00000122882.11	novel	3006	14	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	21	junction_12	132.289744080518	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTAGTTTAGATTACTCA	-4	True	NA	-15	True	AATAAA	-22	NA	73168008	73134523	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_73134814_73136703_73136919_73138002_73138071_73139308_73139496_73139630_73139738_73146275_73146362_73148275_73148405_73152292_73152422_73154255_73154449_73156274_73156454_73156567_73156656_73160433_73160552_73167865
H1_mix_00011380	chr10	-	581	4	FSM	ENSG00000122882.11	ENST00000610256.1	581	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	216.20566340614	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTGAAAATAGCACCAATAG	NA	False	NA	NA	False	AATAGA	-32	NA	73169055	73156588	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_73156656_73160433_73160552_73163732_73163951_73168877
H1_mix_00011381	chr10	-	1979	6	Fusion	ENSG00000288559.1_ENSG00000213551.7	novel	2295	5	NA	NA	111	-914	multi-exon	FALSE	canonical	2	8	junction_5	179.609131170996	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGTGTATATAATTCAATA	4513	False	NA	-42	True	NA	NA	NA	73248157	73242867	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr10_-_73243520_73243842_73243930_73245921_73246177_73246687_73246829_73247009_73247505_73247808
H1_mix_00011383	chr10	-	2440	7	FSM	ENSG00000166343.10	ENST00000299432.7	2423	7	0	-17	0	17	multi-exon	FALSE	canonical	1	1	junction_6	1.7950549357115	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTCACTGGCAAGTATTA	-3	True	NA	19	True	AATAAA	-38	NA	73433561	73423561	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_73424773_73425097_73425192_73425810_73426378_73426606_73426732_73427612_73427769_73428063_73428302_73433512
H1_mix_00011385	chr10	-	5822	20	NIC	ENSG00000166348.20	novel	6758	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_2	16.6582065323776	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTATTTAATTCCTTGT	829	False	NA	-25	True	AATAAA	-11	NA	73575658	73497549	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_73499189_73500654_73500839_73505307_73505427_73516374_73517748_73519796_73519993_73520907_73521028_73523582_73523751_73526646_73526781_73529679_73529912_73530142_73530524_73530703_73530836_73536268_73536438_73539443_73539594_73541374_73541522_73541632_73541739_73542802_73542886_73543017_73543132_73545537_73545673_73571420_73571514_73575511
H1_mix_00011386	chr10	-	6758	22	FSM	ENSG00000166348.20	ENST00000681793.1	6758	22	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_21	33.7391621970617	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTATTTAATTCCTTGT	3	True	NA	-25	True	AATAAA	-11	NA	73591339	73497549	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_73499189_73500654_73500839_73505307_73505427_73516374_73517748_73519796_73519993_73520907_73521028_73523582_73523751_73526646_73526781_73529679_73529912_73530142_73530524_73530703_73530836_73534599_73534771_73536268_73536438_73539443_73539594_73541374_73541522_73541632_73541739_73542802_73542886_73543017_73543132_73545537_73545673_73571420_73571514_73575511_73576362_73591277
H1_mix_00011393	chr10	-	3939	1	FSM	ENSG00000279689.1	ENST00000623453.1	3599	1	-83	-257	-83	257	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGGCCACATGGACAGGG	9006	False	NA	NA	False	AAGAAA	-17	NA	73772945	73769006	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_73769000_73772900
H1_mix_00011398	chr10	-	722	1	FSM	ENSG00000236900.1	ENST00000436122.1	256	1	-493	27	-493	-27	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGCCAAAGCAGGACTACT	NA	False	NA	NA	False	AATGAA	-7	NA	74345298	74344576	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_74344600_74345300
H1_mix_00011401	chr10	-	993	6	ISM	ENSG00000165644.11	ENST00000372538.8	1250	7	18	330	-3	0	intron_retention	FALSE	canonical	3	98	junction_5	20.3135422809514	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGAGCCTCCGTGTGT	16	True	NA	-9	True	AATAAA	-20	NA	75235939	75233970	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_-_75234226_75234609_75234744_75234937_75234993_75235059_75235179_75235266_75235373_75235615
H1_mix_00011402	chr10	-	1365	2	FSM	ENSG00000156113.24	ENST00000618048.2	1269	2	-96	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGTGAGCCAGCTGCCTT	1082	False	NA	NA	False	AATAAA	-21	NA	77637821	77636198	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_77637007_77637264
H1_mix_00011403	chr10	-	1540	1	FSM	ENSG00000213513.3	ENST00000439688.1	1540	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGAGGACAGCGGTGGAG	9465	False	NA	NA	False	NA	NA	NA	77781876	77780336	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_77780300_77781900
H1_mix_00011404	chr10	-	861	7	FSM	ENSG00000151208.17	ENST00000489547.1	861	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	65.5762914474431	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGCTGTAGTAGAAAAAATC	NA	False	NA	NA	False	NA	NA	NA	77812229	77806104	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_77806172_77806757_77806929_77807795_77807945_77809546_77809731_77811093_77811235_77811923_77812058_77812214
H1_mix_00011405	chr10	-	1205	5	FSM	ENSG00000151208.17	ENST00000476354.2	1198	5	0	-7	0	7	multi-exon	FALSE	canonical	3	12	junction_1	75.6186980845346	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAGCCTAGCTTTTTAC	NA	False	NA	NA	False	AATAAA	-25	NA	77820021	77816025	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_77816176_77816550_77816702_77817006_77817097_77817776_77817890_77819320
H1_mix_00011406	chr10	-	1379	3	FSM	ENSG00000148606.14	ENST00000484760.1	1859	3	321	159	321	-159	multi-exon	FALSE	canonical	3	197	junction_2	4	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGCACATTTTATTGAACA	9690	False	NA	NA	False	AGTAAA	-30	NA	78019852	78013244	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_78013791_78017574_78017717_78019161
H1_mix_00011407	chr10	-	2122	1	FSM	ENSG00000280355.1	ENST00000623504.1	2122	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATAGATTTATTTAAAAT	NA	False	NA	NA	False	NA	NA	NA	79684094	79681972	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_79682000_79684100
H1_mix_00011410	chr10	-	2730	5	FSM	ENSG00000225484.7	ENST00000659471.1	2730	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	73.3156702213108	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATATTAAAGGATATAAACT	220	False	NA	NA	False	NA	NA	NA	79826359	79795690	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_79798028_79804484_79804528_79806038_79806123_79814612_79814717_79826197
H1_mix_00011412	chr10	-	915	6	NNC	ENSG00000225484.7	novel	880	5	NA	NA	0	1064	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	67.7040619165497	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAAAATTAGCTGGGTGT	63	False	NA	NA	False	ATTAAA	-3	NA	79826516	79802798	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_79802959_79804484_79804528_79806038_79806123_79808758_79808964_79814612_79814717_79826197
H1_mix_00011413	chr10	-	2540	5	FSM	ENSG00000133661.17	ENST00000679234.1	3639	5	821	278	583	-5	multi-exon	FALSE	canonical	1	2	junction_1	2.1650635094611	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAGGACTTCTCTCCAGA	4979	False	NA	-4	True	AATAAA	-19	NA	79944125	79937744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_79938229_79940704_79940789_79941397_79941515_79941953_79942071_79942387
H1_mix_00011416	chr10	-	3362	3	FSM	ENSG00000062650.20	ENST00000484070.1	3207	3	10	-165	10	165	multi-exon	FALSE	canonical	3	554	junction_2	2.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTCAACAACTCAGGCCA	9718	False	NA	NA	False	AATATA	-5	NA	86444022	86435090	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_86437609_86437919_86438016_86443274
H1_mix_00011417	chr10	-	4203	18	NIC	ENSG00000062650.20	novel	6310	19	NA	NA	125	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_10	130.963398568859	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGGTTGTTGTTCCCT	108	False	NA	-4	True	AATAAA	-21	NA	86521667	86437009	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_86437609_86437919_86438016_86443274_86443364_86446241_86446450_86451966_86452132_86453219_86453336_86453655_86453832_86458988_86459066_86460398_86460497_86461175_86461288_86470991_86471104_86472207_86472345_86472611_86472765_86473877_86473974_86497200_86497320_86499717_86500744_86517570_86518092_86521364
H1_mix_00011420	chr10	-	4127	7	FSM	ENSG00000173269.14	ENST00000372027.10	4127	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.38443731048635	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCCTCATTTACTTCT	-14	True	NA	NA	False	AATAAA	-16	NA	86957615	86935539	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_86937126_86942316_86944129_86944261_86944436_86945187_86945269_86945369_86945477_86945560_86945690_86957377
H1_mix_00011424	chr10	-	965	7	FSM	ENSG00000223482.9	ENST00000671543.1	965	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	112.219155623667	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGATTTTTATGGCAAAC	313	False	NA	NA	False	NA	NA	NA	87342307	87203440	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_87203937_87246114_87246213_87288441_87288496_87307956_87308061_87326629_87326673_87336785_87336890_87342241
H1_mix_00011425	chr10	-	1006	7	NIC	ENSG00000223482.9	novel	849	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	97.8246730976734	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTCTATTGTTTAAAATT	66	False	NA	-4	True	AATAAA	-18	NA	87342554	87238666	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_87238850_87288441_87288496_87307956_87308061_87326629_87326673_87330891_87331097_87336785_87336890_87342241
H1_mix_00011428	chr10	-	1295	4	FSM	ENSG00000223482.9	ENST00000660726.2	1835	4	16	524	0	-522	multi-exon	FALSE	canonical	3	47	junction_1	103.879203351243	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTAGCTTTGCAACATC	6	True	NA	NA	False	AATGAA	-4	NA	87342377	87319187	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_87320200_87326629_87326673_87336785_87336890_87342241
H1_mix_00011431	chr10	-	322	1	FSM	ENSG00000243782.3	ENST00000495193.3	281	1	34	-75	34	75	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCACAAAACAAATTTGTAAA	8287	False	NA	NA	False	ACTAAA	-15	NA	87833064	87832742	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_87832700_87833100
H1_mix_00011432	chr10	-	3153	7	FSM	ENSG00000184719.12	ENST00000371947.7	3385	7	0	232	0	-232	multi-exon	FALSE	canonical	3	7	junction_1	15.4209453522005	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGCAGAAAAATAGACTAAAT	NA	False	NA	NA	False	NA	NA	NA	88584530	88274095	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_88275033_88314465_88314642_88362551_88362726_88572902_88573062_88581566_88581710_88582201_88582308_88583072
H1_mix_00011433	chr10	-	2822	1	FSM	ENSG00000286116.1	ENST00000651408.1	4205	1	1378	5	1378	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTCCTTCGTTACTC	6820	False	NA	NA	False	ATTAAA	-13	NA	88992871	88990049	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_88990000_88992900
H1_mix_00011435	chr10	-	2513	6	FSM	ENSG00000152782.18	ENST00000322191.10	2513	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	106.151589719608	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTAGTGTATATGTTA	6	True	NA	-34	True	AATAAA	-18	NA	89643874	89582987	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_89584466_89588651_89588778_89593196_89593321_89599251_89599506_89611695_89612049_89643696
H1_mix_00011436	chr10	-	2703	7	FSM	ENSG00000152782.18	ENST00000342512.3	2703	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_6	78.4573486395988	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTAGTGTATATGTTA	-7	True	NA	-34	True	AATAAA	-18	NA	89643887	89582987	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_89584466_89588651_89588778_89593196_89593321_89593812_89593990_89599251_89599506_89611695_89612049_89643696
H1_mix_00011437	chr10	-	5671	24	FSM	ENSG00000119912.18	ENST00000679089.1	5372	24	-9	-290	-9	38	multi-exon	FALSE	canonical	2	16	junction_4	60.9029411602262	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGAGCAACAGAGCAACT	NA	False	NA	NA	False	NA	NA	NA	92574105	92451645	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_92454540_92455575_92455644_92456358_92456432_92461190_92461253_92465675_92465844_92468878_92468991_92470253_92470346_92474840_92474962_92475883_92475995_92479276_92479422_92483254_92483338_92487195_92487319_92490492_92490596_92504793_92504898_92506441_92506523_92507574_92507667_92508112_92508206_92508727_92508891_92510049_92510163_92514919_92515043_92531747_92531918_92534577_92534786_92537365_92537551_92573921
H1_mix_00011440	chr10	-	6820	25	FSM	ENSG00000119912.18	ENST00000679069.1	6804	25	0	-16	0	0	multi-exon	TRUE	canonical	3	10	junction_11	62.3958994156578	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTCACCTCTGGAGTC	-31	True	NA	-16	True	AATAAA	-6	NA	92574096	92452255	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_92454540_92455575_92455644_92456358_92456432_92461190_92461253_92463730_92464004_92465675_92465844_92468878_92468991_92470253_92470346_92474840_92474962_92475883_92475995_92479276_92480917_92483254_92483338_92487195_92487319_92490492_92490596_92504793_92504898_92506441_92506523_92507574_92507667_92508112_92508206_92508727_92508891_92510049_92510163_92514919_92515043_92531747_92531918_92534577_92534786_92537365_92537551_92573921
H1_mix_00011442	chr10	-	6161	23	FSM	ENSG00000119912.18	ENST00000677079.1	5064	23	3	-1100	0	408	multi-exon	FALSE	canonical	2	4	junction_1	66.3219669927327	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCTAAAGTGCTGGGATT	-28	True	NA	NA	False	NA	NA	NA	92574093	92451275	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_92454540_92461190_92461253_92463730_92464004_92465675_92465844_92468878_92468991_92470253_92470346_92474840_92474962_92475883_92475995_92479276_92479422_92483254_92483338_92487195_92487319_92490492_92490596_92504793_92504898_92506441_92506523_92507574_92507667_92508112_92508206_92508727_92508891_92510049_92510163_92514919_92515043_92531747_92531918_92534577_92534786_92537365_92537551_92573921
H1_mix_00011447	chr10	-	208	2	FSM	ENSG00000148690.12	ENST00000472153.1	262	2	104	-50	104	50	multi-exon	FALSE	canonical	3	444	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTACCTGCACTAAGTAT	NA	False	NA	NA	False	TTTAAA	-37	NA	93685359	93684004	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_93684099_93685245
H1_mix_00011448	chr10	-	3449	21	NNC	ENSG00000173145.11	novel	3455	21	NA	NA	15	-2	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_8	49.0549691672515	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTTGTGATATGATAAT	63	False	NA	-4	True	AATAAA	-23	NA	94362924	94333227	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_94334306_94334633_94334719_94337776_94337875_94338607_94338737_94339738_94339921_94340275_94340348_94340432_94340497_94341672_94341746_94344403_94344516_94344852_94344934_94346424_94346557_94349249_94349379_94350112_94350289_94352309_94352404_94352895_94353058_94354962_94355094_94356534_94356592_94357173_94357332_94358082_94358216_94361664_94361873_94362829
H1_mix_00011449	chr10	-	5898	24	NIC	ENSG00000095637.23	novel	5927	25	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_19	22.8262939949203	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTGTTCTGGTCATTC	8	True	NA	-1	True	AATAAA	-23	NA	95561376	95311772	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_95315127_95318319_95318433_95321962_95322022_95339132_95339328_95341284_95341411_95341563_95341679_95346405_95346453_95354881_95354968_95357630_95357804_95367649_95367700_95381684_95381800_95383984_95384115_95384237_95384286_95397219_95397284_95399016_95399190_95406117_95406148_95410632_95410778_95414493_95414863_95421960_95422074_95432447_95432577_95437489_95437556_95441125_95441181_95491034_95491121_95561319
H1_mix_00011457	chr10	-	557	3	FSM	ENSG00000119977.22	ENST00000478245.1	557	3	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_1	15.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCCTGGCCCACATTGG	13	True	NA	NA	False	NA	NA	NA	95693901	95692863	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_95693039_95693352_95693477_95693643
H1_mix_00011461	chr10	-	854	1	FSM	ENSG00000229417.1	ENST00000429734.1	854	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTAGAAAATAGTTTAAAC	NA	False	NA	NA	False	NA	NA	NA	96190219	96189365	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_96189400_96190200
H1_mix_00011462	chr10	-	6262	15	FSM	ENSG00000077147.16	ENST00000649367.1	6250	15	0	-12	0	1	multi-exon	FALSE	canonical	2	6	junction_14	507.098710352153	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTGGATTCCTTATTT	727	False	NA	-3	True	AATAAA	-14	NA	96586594	96518108	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_96522331_96527212_96527290_96527412_96527497_96528030_96528178_96530539_96530609_96533050_96533191_96544075_96544207_96547894_96547990_96551244_96551412_96552927_96553060_96559658_96559737_96561977_96562139_96565303_96565427_96576633_96576830_96586154
H1_mix_00011466	chr10	-	5459	13	NNC	ENSG00000213390.11	novel	5438	12	NA	NA	0	5829	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	98.4616041916848	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCAGATCTTGTGAGAAC	5	True	NA	NA	False	NA	NA	NA	97292635	97216343	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_97216363_97222174_97226133_97229146_97229226_97229763_97229875_97235216_97235316_97243967_97244160_97246271_97246338_97256317_97256405_97259401_97259629_97263419_97263630_97264825_97264907_97265859_97266126_97292571
H1_mix_00011467	chr10	-	217	2	Genic_Genomic	ENSG00000181274.7	novel	2233	1	NA	NA	2024	32294	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAATGTAGACAAGGGTA	2017	False	NA	NA	False	NA	NA	NA	97332705	97300202	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr10_-_97300229_97332514
H1_mix_00011468	chr10	-	209	2	Genic_Genomic	ENSG00000181274.7	novel	2233	1	NA	NA	2041	8275	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGGCCGGATGCGGTG	2034	False	NA	NA	False	AAAAAG	-39	NA	97332688	97324221	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr10_-_97324239_97332496
H1_mix_00011470	chr10	-	319	1	FSM	ENSG00000200737.1	ENST00000363867.1	113	1	18	-224	18	224	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCATCACTGCAACAAATACA	4764	False	NA	NA	False	NA	NA	NA	97421289	97420970	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_97421000_97421300
H1_mix_00011474	chr10	-	3587	32	NIC	ENSG00000155229.21	novel	3532	32	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	24	junction_29	97.7174567452384	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTAATGGGGCTGTCAGAT	9	True	NA	-34	True	AATAAA	-10	NA	97498399	97458329	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_97458720_97458799_97458901_97459222_97459283_97459361_97459527_97459658_97459742_97460045_97460233_97460694_97460752_97460906_97461008_97461495_97461623_97461827_97461897_97462016_97462120_97462582_97462683_97463857_97464014_97465804_97465955_97466058_97466160_97466503_97466586_97466775_97466902_97467504_97467584_97468251_97468407_97468965_97469105_97469645_97469724_97470128_97470204_97470774_97470862_97476682_97476745_97476834_97476964_97477346_97477417_97477854_97477930_97478303_97478390_97480240_97480358_97480941_97481043_97484102_97484152_97498272
H1_mix_00011478	chr10	-	2815	20	NNC	ENSG00000107521.20	novel	3703	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_19	83.9341187365939	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTAGTGCTTCTAGACC	-13	True	NA	-2	True	AATAAA	-30	NA	98446935	98417014	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_98417727_98418174_98418258_98420044_98420159_98422368_98422514_98423602_98423669_98423752_98423888_98424312_98424375_98425540_98425721_98425817_98425986_98427214_98427265_98429572_98429643_98429790_98429890_98430570_98430671_98431130_98431292_98433982_98434092_98435271_98435415_98435634_98435773_98443123_98443241_98445299_98445414_98446886
H1_mix_00011483	chr10	-	1289	4	ISM	ENSG00000107521.20	ENST00000478087.5	971	9	-495	5654	-495	-106	5prime_fragment	FALSE	canonical	3	34	junction_3	68.241401574769	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGTAATAATCATCTAAT	9882	False	NA	-13	True	ATTAAA	-19	NA	98434586	98429261	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_-_98429643_98430570_98430671_98431130_98431292_98433939
H1_mix_00011488	chr10	-	3825	2	FSM	ENSG00000155287.11	ENST00000479722.1	581	2	-297	-2947	-27	0	multi-exon	FALSE	canonical	3	132	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTCATTGGGTTTGTCT	-27	True	NA	NA	False	AATAAA	-17	NA	99620466	99610521	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_99613925_99620044
H1_mix_00011492	chr10	-	1073	10	NIC	ENSG00000095485.18	novel	2402	13	NA	NA	-3	-1010	combination_of_known_junctions	FALSE	canonical	1	1	junction_8	82.6663679803445	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTCAGATCAGCAAGGAAG	2	True	NA	NA	False	NA	NA	NA	100267634	100233314	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_100233372_100235666_100235765_100236849_100236970_100238021_100238232_100243697_100243778_100245798_100245914_100246794_100246936_100250109_100250179_100253420_100253540_100267570
H1_mix_00011494	chr10	-	282	1	FSM	ENSG00000212464.1	ENST00000391162.1	147	1	15	-150	15	150	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACAAGGAATTTCTCCTG	13	False	NA	39	True	NA	NA	NA	100237287	100237005	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_100237000_100237300
H1_mix_00011496	chr10	-	1232	6	NNC	ENSG00000196072.12	novel	2619	5	NA	NA	0	32279	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	234.883801059162	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTAATTAGTGGCACACT	11	True	NA	NA	False	NA	NA	NA	100286673	100241000	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_100241031_100274702_100275494_100280123_100280229_100280933_100281054_100286096_100286214_100286604
H1_mix_00011502	chr10	-	2203	4	FSM	ENSG00000075826.17	ENST00000485800.6	2217	4	0	14	0	-12	multi-exon	FALSE	canonical	3	15	junction_2	2.35702260395516	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTCGATTTGGTTTCCTC	NA	False	NA	-24	True	AATAAA	-3	NA	100490171	100486659	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_100488099_100488857_100489399_100489702_100489762_100490007
H1_mix_00011507	chr10	-	296	2	Genic_Genomic	ENSG00000272572.1	novel	1637	1	NA	NA	-381	-1235	multi-exon	FALSE	canonical	1	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTTGTTTCTCATGAGT	NA	False	NA	-2	True	AATAAA	-22	NA	100913120	100912337	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr10_-_100912524_100913010
H1_mix_00011509	chr10	-	1016	4	NNC	ENSG00000055950.17	novel	866	4	NA	NA	0	12127	intron_retention	FALSE	non_canonical	0	0	junction_1	231.301150499132	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGACTCCTTCCTTTAA	-1	True	NA	NA	False	NA	NA	NA	100987483	100957330	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_100957368_100986274_100986976_100987089_100987197_100987312
H1_mix_00011512	chr10	-	2376	10	NNC	ENSG00000107829.15	novel	2394	9	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	37.3296955899657	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTCCTCACTGGCTGA	-8	True	NA	-2	True	AATAAA	-18	NA	101695170	101610663	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_101611411_101611627_101611770_101612336_101612478_101624744_101624811_101667885_101667981_101672914_101673048_101673487_101673674_101676340_101676437_101694380_101694996_101695015
H1_mix_00011514	chr10	-	1169	6	FSM	ENSG00000107831.14	ENST00000320185.7	1169	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	7.21110255092798	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCTGTGGTGTCTGTCT	0	True	NA	51	True	TTTAAA	-31	NA	101776114	101770108	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_101770620_101771462_101771570_101774731_101774913_101775129_101775217_101775739_101775777_101775868
H1_mix_00011515	chr10	-	5027	15	NIC	ENSG00000198408.14	novel	5174	16	NA	NA	19	-3	combination_of_known_junctions	FALSE	canonical	3	46	junction_10	250.267244915412	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCTTGTCGTGTTGTAT	43	False	NA	-16	True	AATAAA	-10	NA	101818399	101784452	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_101786588_101787363_101787524_101790895_101791089_101791353_101791440_101792838_101792944_101793912_101793999_101797979_101798155_101798841_101799456_101800241_101800401_101803734_101804020_101807729_101807902_101810183_101810315_101813029_101813128_101813554_101813607_101817823
H1_mix_00011517	chr10	-	663	8	FSM	ENSG00000120049.20	ENST00000343195.8	663	8	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_7	6.01019541941789	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCAGGAGAGGGGGTCAG	401	False	NA	NA	False	NA	NA	NA	101843568	101827352	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_101827401_101827688_101827752_101827888_101827994_101828150_101828259_101828388_101828460_101828626_101828697_101829074_101829200_101843495
H1_mix_00011519	chr10	-	3815	17	FSM	ENSG00000059915.17	ENST00000020673.6	3824	17	0	9	0	-9	multi-exon	TRUE	canonical	1	3	junction_15	5.03076472815018	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGACTTGCTGGCTGGGCCT	-2	True	NA	-12	True	ATTAAA	-8	NA	102418785	102402627	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_102403431_102403841_102403986_102404582_102404728_102404897_102405056_102405182_102405254_102405345_102405537_102407222_102407267_102410857_102410948_102411057_102411117_102411706_102411820_102412146_102412228_102412380_102412576_102413768_102414198_102414862_102415230_102416016_102416120_102416384_102417122_102418700
H1_mix_00011520	chr10	-	2685	5	NIC	ENSG00000059915.17	novel	3824	17	NA	NA	-166	-11	intron_retention	FALSE	canonical	3	9	junction_4	4.30116263352131	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGACTTGCTGGCTGGGC	9961	False	NA	-14	True	ATTAAA	-6	NA	102406300	102402629	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_102403986_102404582_102404728_102404897_102405056_102405182_102405254_102405345
H1_mix_00011523	chr10	-	689	6	FSM	ENSG00000138107.13	ENST00000481044.6	689	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	324.51033881835	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTAGGTGGCCTGCCTTC	63	False	NA	NA	False	NA	NA	NA	102502654	102483013	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_102483104_102484159_102484377_102485608_102485734_102488149_102488276_102489062_102489139_102502599
H1_mix_00011524	chr10	-	2428	1	FSM	ENSG00000272933.1	ENST00000607967.1	1349	1	-881	-198	-881	198	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGAGTCCGCAGCCGGCCG	1366	False	NA	NA	False	NA	NA	NA	102645021	102642593	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_102642600_102645000
H1_mix_00011525	chr10	-	3470	19	FSM	ENSG00000076685.19	ENST00000675020.1	3470	19	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	153.056231093488	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATAAATATTCAAGAACT	6	True	NA	-31	True	NA	NA	NA	103193272	103088059	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_103089909_103090610_103090788_103090935_103090997_103091563_103091616_103093138_103093310_103093971_103094039_103094347_103094456_103095938_103095981_103097290_103097375_103098047_103098089_103098930_103098985_103099925_103100020_103101044_103101103_103101234_103101327_103105705_103105802_103106588_103106707_103174857_103174983_103181184_103181329_103193235
H1_mix_00011528	chr10	-	3451	19	FSM	ENSG00000076685.19	ENST00000369857.9	3449	19	0	-2	0	0	multi-exon	FALSE	canonical	1	2	junction_12	127.89110916115	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTCAATAAAGTGTAATAT	6	True	NA	-48	True	NA	NA	NA	103193272	103088180	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_103089909_103090610_103090788_103090935_103090997_103091563_103091616_103093138_103093310_103093971_103094039_103094347_103094456_103095938_103095981_103097290_103097375_103098930_103098985_103099925_103100020_103100751_103100965_103101044_103101103_103101234_103101327_103105705_103105802_103106588_103106707_103139405_103139480_103174857_103174983_103193235
H1_mix_00011539	chr10	-	529	4	FSM	ENSG00000065618.21	ENST00000433822.1	537	4	0	8	0	-8	multi-exon	FALSE	canonical	2	4	junction_1	2.44948974278318	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCTAATATCATGTTTAA	3307	False	NA	NA	False	ATTAAA	-10	NA	104032968	104031295	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_104031594_104032203_104032291_104032673_104032755_104032905
H1_mix_00011540	chr10	-	7948	27	NIC	ENSG00000108018.16	novel	7444	26	NA	NA	-546	-195	combination_of_known_junctions	TRUE	canonical	3	45	junction_5	9.85576454033659	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTGTTCATTCTAAATAT	10	True	NA	38	True	NA	NA	NA	107165252	106573865	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_106577556_106579090_106579252_106579368_106579475_106597350_106597451_106607165_106607298_106611910_106612024_106618148_106618273_106620427_106620562_106629201_106629389_106652381_106652554_106667688_106667803_106671236_106671368_106672867_106672986_106675048_106675157_106677312_106677405_106679255_106679333_106679631_106679735_106688191_106688339_106699213_106699394_106706544_106706635_106709222_106709342_106730049_106730115_106761587_106761662_106776533_106776693_106829573_106829674_106956512_106956581_107163968
H1_mix_00011543	chr10	-	2452	22	NNC	ENSG00000108039.18	novel	2497	21	NA	NA	0	52404	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	60.7904097938358	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTTTATTTGTCTTCTG	41	True	NA	NA	False	AAAAAG	-34	NA	109923431	109812361	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_109812397_109864765_109865313_109868613_109868713_109869952_109870030_109870730_109870905_109871791_109871862_109873366_109873428_109875527_109875600_109877789_109877868_109877999_109878059_109880187_109880239_109880841_109880932_109882431_109882643_109884066_109884149_109886245_109886342_109888048_109888193_109888502_109888596_109891721_109891827_109893011_109893076_109907690_109907816_109915010_109915100_109923401
H1_mix_00011544	chr10	-	2301	20	NIC	ENSG00000108039.18	novel	2497	21	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_3	61.7596090295204	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTTAGCTGTCTCTT	-17	True	NA	-5	True	AATAAA	-16	NA	109923489	109864765	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_109865313_109868613_109868713_109869952_109870030_109871791_109871862_109873366_109873428_109875527_109875600_109877789_109877868_109877999_109878059_109880187_109880239_109880841_109880932_109882431_109882643_109884066_109884149_109886245_109886342_109888048_109888193_109888502_109888596_109891721_109891827_109893011_109893076_109907690_109907816_109915010_109915100_109923401
H1_mix_00011553	chr10	-	803	5	FSM	ENSG00000119953.14	ENST00000674928.1	803	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	82.5242388635	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAAGTGACTTTGACTT	5	True	NA	0	True	NA	NA	NA	110304938	110297569	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_110297729_110298647_110298791_110300546_110300737_110303467_110303588_110304747
H1_mix_00011554	chr10	-	727	3	FSM	ENSG00000214413.9	ENST00000447005.5	727	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	54.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGCATAAAGTGTTTGT	164	False	110919224	1	True	ATTAAA	-24	NA	110919201	110899955	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_110900527_110901537_110901613_110919120
H1_mix_00011555	chr10	-	492	3	FSM	ENSG00000214413.9	ENST00000423273.5	492	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	53.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAAACTATGAACCAAGTT	19	True	NA	52	True	CATAAA	-3	NA	110919157	110900164	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_110900527_110918120_110918214_110919120
H1_mix_00011559	chr10	-	3341	11	NIC	ENSG00000023041.12	novel	2121	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	4	junction_6	72.65645188144	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTTTTTACTTAAAGCAT	6	True	NA	-13	True	AATAAA	-23	NA	112446940	112430299	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112433282_112434296_112434465_112438335_112439627_112440533_112440696_112442191_112442260_112443514_112443607_112445169_112445651_112446704
H1_mix_00011562	chr10	-	2142	11	FSM	ENSG00000023041.12	ENST00000683895.1	2145	11	8	-5	-1	0	multi-exon	FALSE	canonical	3	14	junction_10	55.6691117227498	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTTTTTACTTAAAGCAT	-2	True	NA	-13	True	AATAAA	-23	NA	112446948	112430299	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112433282_112434296_112434465_112438335_112438390_112440533_112440696_112442191_112442352_112443514_112443607_112445169_112445651_112446766
H1_mix_00011565	chr10	-	2242	12	NNC	ENSG00000023041.12	novel	2313	12	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	63.6568798097067	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCAGTTTTTACTTAAAG	-3	True	NA	-16	True	AATAAA	-20	NA	112446913	112430302	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112433282_112433540_112433617_112434296_112434465_112438335_112438390_112440533_112440696_112442191_112442352_112443514_112443607_112445169_112445651_112446704
H1_mix_00011566	chr10	-	3489	9	FSM	ENSG00000023041.12	ENST00000684617.1	3472	9	0	-17	0	0	multi-exon	FALSE	canonical	3	125	junction_4	32.5093736482264	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACAGAGCAAGACTCCAT	5	True	NA	NA	False	NA	NA	NA	112446941	112431354	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_112432287_112432375_112432522_112433239_112434465_112438335_112438390_112440533_112440696_112442191_112442352_112443514_112443607_112445169_112445651_112446704
H1_mix_00011570	chr10	-	461	2	FSM	ENSG00000165813.20	ENST00000490661.1	477	2	0	16	0	-16	multi-exon	FALSE	canonical	3	49	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTTAATATTAGTAAACC	NA	False	NA	NA	False	NA	NA	NA	114132094	114131041	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_114131337_114131928
H1_mix_00011571	chr10	-	2034	3	FSM	ENSG00000165813.20	ENST00000369285.7	2035	3	0	1	0	-1	multi-exon	FALSE	canonical	3	19	junction_1	3.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATCAGTGCTGCTGCTAT	8	True	NA	-6	True	AATAAA	-21	NA	114174202	114161608	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_114163330_114173140_114173266_114174014
H1_mix_00011573	chr10	-	1624	16	FSM	ENSG00000099204.21	ENST00000651023.1	1682	16	58	0	58	0	multi-exon	FALSE	canonical	0	0	junction_15	91.8093677137578	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCCGGGAAAGGTCATCT	11	True	NA	NA	False	NA	NA	NA	114632034	114444085	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_114444135_114445311_114445404_114451623_114451672_114453378_114453484_114465697_114465828_114468180_114468217_114472976_114473133_114473878_114473957_114487957_114488017_114491790_114491879_114545004_114545099_114547649_114547777_114571296_114571407_114575415_114575600_114601826_114601962_114631901
H1_mix_00011574	chr10	-	208	1	FSM	ENSG00000228169.3	ENST00000486414.1	492	1	157	127	157	-127	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCATGTGGTCTTTGGCA	8365	False	NA	NA	False	NA	NA	NA	114690477	114690269	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_114690300_114690500
H1_mix_00011575	chr10	-	2449	6	NIC	ENSG00000165863.17	novel	966	6	NA	NA	140	1479	combination_of_known_junctions	FALSE	canonical	3	24	junction_3	27.8165418411419	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATTTGTTCTTTTTAA	3114	False	NA	-37	True	AATAAA	-14	NA	116670124	116662216	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_116664052_116664173_116664272_116664760_116664948_116665607_116665827_116668257_116668324_116670080
H1_mix_00011577	chr10	-	2566	10	NNC	ENSG00000165868.16	novel	5446	10	NA	NA	12	-2832	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	9.74236009634799	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAAATTATATGCTGTGA	12	False	NA	NA	False	NA	NA	NA	116742583	116674042	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_116675419_116676398_116676503_116679502_116679762_116681151_116681257_116681790_116681878_116683812_116683963_116692350_116692468_116705150_116705279_116707199_116707286_116742429
H1_mix_00011578	chr10	-	565	3	FSM	ENSG00000165669.14	ENST00000491416.5	576	3	11	0	11	0	multi-exon	FALSE	canonical	3	314	junction_2	4.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATATAGAAAGAAG	NA	False	NA	83	True	AATAAA	-36	NA	118326338	118310635	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_118310909_118311206_118311314_118326153
H1_mix_00011582	chr10	-	391	1	FSM	ENSG00000236058.3	ENST00000420302.1	549	1	204	-46	204	46	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCCAGATATGGTGGCAC	NA	False	NA	NA	False	AATAAA	-24	NA	118872398	118872007	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_118872000_118872400
H1_mix_00011585	chr10	-	4620	14	NNC	ENSG00000151923.18	novel	2321	13	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	83.3176000927001	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAAGTGGCTTTTTCTTAT	-4	True	NA	-9	True	AATAAA	-14	NA	119597029	119571806	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_119572282_119573273_119575792_119576610_119576751_119577079_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119581921_119582010_119582168_119582224_119582458_119582558_119588151_119588249_119593451_119593514_119596433
H1_mix_00011588	chr10	-	5482	17	FSM	ENSG00000066468.24	ENST00000683211.1	6964	17	1482	0	793	0	multi-exon	FALSE	canonical	3	135	junction_9	136.659690815361	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTATTTTTTTAATACTC	3428	False	NA	-16	True	AATAAA	-9	NA	121595329	121478346	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_121480022_121483697_121483804_121485394_121485533_121487353_121487425_121487990_121488114_121496531_121496723_121498494_121498606_121500825_121500948_121503789_121503942_121515122_121515320_121517318_121517464_121519978_121520170_121538591_121538716_121551289_121551460_121564501_121564580_121565437_121565705_121593708
H1_mix_00011590	chr10	-	4670	18	NIC	ENSG00000066468.24	novel	4624	18	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	135	junction_9	162.213644419901	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGTCACGCAACTTATT	-1	True	NA	-28	True	AATAAA	-37	NA	121598431	121478358	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_121480114_121483697_121483804_121485394_121485533_121487353_121487425_121487990_121488114_121496531_121496723_121498494_121498606_121500825_121500948_121503789_121503942_121515122_121515320_121517318_121517464_121519978_121520170_121538591_121538716_121551289_121551460_121564501_121564580_121565437_121565705_121593708_121593968_121597961
H1_mix_00011595	chr10	-	4853	12	FSM	ENSG00000107669.19	ENST00000540606.7	5138	12	293	-8	-5	0	multi-exon	FALSE	canonical	3	21	junction_11	66.1119761346592	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTCTTGGTGGTCATTA	NA	False	NA	-5	True	AATAAA	-17	NA	121928492	121740423	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_121743859_121790168_121790290_121836717_121836818_121841081_121841264_121870005_121870039_121898840_121898970_121902390_121902621_121910905_121911152_121913789_121913894_121922348_121922412_121924265_121924330_121928346
H1_mix_00011600	chr10	-	1755	8	FSM	ENSG00000138161.14	ENST00000368900.5	1976	8	221	0	-97	0	multi-exon	FALSE	canonical	3	22	junction_5	43.8648201749374	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCACTGTGTCGGTGTGTT	9937	False	NA	-11	True	AATAAA	-36	NA	122845954	122832157	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_122832451_122833671_122833941_122834705_122835098_122836177_122836351_122836830_122836900_122837403_122837555_122839016_122839232_122845761
H1_mix_00011603	chr10	-	1814	9	FSM	ENSG00000065154.12	ENST00000539214.5	1864	9	50	0	-3	0	multi-exon	FALSE	canonical	3	25	junction_8	241.381829266414	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGTGATGATTATTCA	-4	True	NA	-1	True	AATAAA	-19	NA	124418926	124397302	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_124398103_124400839_124400985_124401725_124401840_124402926_124403056_124403797_124403921_124405435_124405564_124408541_124408638_124408740_124408966_124418872
H1_mix_00011611	chr10	-	2036	11	FSM	ENSG00000175029.17	ENST00000411419.6	2036	11	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_10	225.446246364849	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCCCTTGGGCACAGCA	6	True	NA	-40	True	AATAAA	-18	NA	125161026	124989224	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125110989_125111094_125160826
H1_mix_00011615	chr10	-	654	3	FSM	ENSG00000175029.17	ENST00000476817.1	705	3	51	0	51	0	multi-exon	FALSE	canonical	3	82	junction_2	45	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGAGCGTGTTTGGCGGT	NA	False	NA	NA	False	NA	NA	NA	125161119	125038996	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_125039156_125160318_125160521_125160826
H1_mix_00011633	chr10	-	1311	9	NNC	ENSG00000127884.5	novel	1277	8	NA	NA	0	46978	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	754.04869703488	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAGAAAGAAAAGAAACA	-5	True	NA	NA	False	AAAAAG	-2	NA	133373354	133315506	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_133315543_133362486_133362934_133364657_133364726_133365975_133366096_133366888_133366994_133368922_133369023_133369903_133370032_133370559_133370758_133373245
H1_mix_00011635	chr10	-	1009	5	ISM	ENSG00000148803.12	ENST00000368551.1	628	6	60	-40	60	1	intron_retention	FALSE	canonical	3	230	junction_1	23.5478236786332	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAATTCCAGCTCTGTTCT	29	True	NA	NA	False	NA	NA	NA	133357677	133355162	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_-_133355437_133355737_133355812_133356639_133356739_133356942_133357014_133357186
H1_mix_00011638	chr10	+	283	1	Intergenic	novelGene_193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAAGAGTGTTGGCCA	NA	False	NA	NA	False	NA	NA	NA	43345119	43345402	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr10_+_43345100_43345400
H1_mix_00011645	chr10	+	1040	1	Intergenic	novelGene_203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACACTTCAATACTATTTT	NA	False	NA	NA	False	NA	NA	NA	76822200	76823240	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr10_+_76822200_76823200
H1_mix_00011646	chr10	+	1898	1	Intergenic	novelGene_205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGTGACAAGCACAAGGG	NA	False	NA	NA	False	AATACA	-17	NA	87211319	87213217	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr10_+_87211300_87213200
H1_mix_00011647	chr10	+	424	1	Intergenic	novelGene_207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCAGTTCCCTTATTAGG	2006	False	NA	NA	False	NA	NA	NA	90297314	90297738	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr10_+_90297300_90297700
H1_mix_00011649	chr10	+	711	1	Intergenic	novelGene_209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCCTGACGCCCATCAAG	NA	False	NA	NA	False	NA	NA	NA	96734818	96735529	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr10_+_96734800_96735500
H1_mix_00011651	chr10	+	794	1	Intergenic	novelGene_212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTTCCCTAGACCTAGCT	NA	False	NA	NA	False	AATAAA	-21	NA	106889117	106889911	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr10_+_106889100_106889900
H1_mix_00011654	chr10	+	1622	10	FSM	ENSG00000165568.18	ENST00000298375.12	1613	10	-9	0	-9	0	multi-exon	FALSE	canonical	2	4	junction_9	3.92837100659193	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAATTTTAATTTCTTTT	14	False	NA	NA	False	AATAAA	-24	NA	4826197	4848062	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_4826364_4830674_4830843_4833349_4833467_4835674_4835810_4837458_4837582_4839728_4839827_4841784_4841858_4842420_4842505_4847147_4847231_4847487
H1_mix_00011655	chr10	+	8626	21	FSM	ENSG00000108021.20	ENST00000328090.9	8626	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	47.5482912416419	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTTCTGCAATGATTTT	-6	True	NA	5	True	AATAAA	-16	NA	5684837	5763740	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_5685176_5712822_5712919_5717658_5717751_5720543_5720669_5720754_5720775_5720870_5720971_5723676_5723778_5724429_5724534_5726884_5726958_5727060_5727124_5730486_5731204_5735303_5735547_5739617_5740498_5742096_5742527_5746178_5750028_5756612_5756739_5757519_5757674_5758886_5758993_5761289_5761472_5762531_5762647_5763028
H1_mix_00011656	chr10	+	8912	22	NIC	ENSG00000108021.20	novel	8626	21	NA	NA	6	219	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	43.1944398874231	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCAGAAGTCATTAAGTC	0	True	NA	NA	False	NA	NA	NA	5684843	5763959	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_5685176_5712822_5712919_5714134_5714208_5717658_5717751_5720543_5720669_5720754_5720775_5720870_5720971_5723676_5723778_5724429_5724534_5726884_5726958_5727060_5727124_5730486_5731204_5735303_5735547_5739617_5740498_5742096_5742527_5746178_5750028_5756612_5756739_5757519_5757674_5758886_5758993_5761289_5761472_5762531_5762647_5763028
H1_mix_00011659	chr10	+	2907	7	NIC	ENSG00000134453.16	novel	3275	12	NA	NA	-985	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_3	321.097423775956	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	146	True	NA	NA	NA	6107502	6115872	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_6108743_6109985_6110128_6112209_6113069_6113507_6113582_6114048_6114148_6115238_6115312_6115452
H1_mix_00011660	chr10	+	536	4	FSM	ENSG00000170525.21	ENST00000475881.5	536	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	16.4991582276861	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCACCGTCTGTGTCCCCTC	4711	False	NA	NA	False	NA	NA	NA	6224165	6233090	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_6224214_6224505_6224624_6226191_6226366_6232894
H1_mix_00011662	chr10	+	2684	6	NIC	ENSG00000107485.18	novel	975	3	NA	NA	56	-6	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	56.0178542966437	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCCTAAGGTGGTTGTG	13	True	NA	15	True	AATAAA	-15	NA	8053659	8074884	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_8053779_8055286_8055897_8058304_8058842_8063992_8064139_8069472_8069599_8073738
H1_mix_00011663	chr10	+	8044	14	FSM	ENSG00000048740.19	ENST00000417956.6	8044	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	46.9475346095741	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCCGGAGTGCATTTTA	56	False	NA	NA	False	AATAAA	-19	NA	11165029	11336675	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_11165318_11165485_11165683_11217424_11217508_11249152_11249202_11257737_11257873_11266597_11266678_11270665_11270825_11275056_11275121_11288417_11288553_11314138_11314259_11321188_11321387_11325835_11325980_11328925_11329098_11330455
H1_mix_00011664	chr10	+	3004	4	ISM	ENSG00000134463.15	ENST00000379215.9	1633	5	76	6168	12	2172	5prime_fragment	FALSE	canonical	3	238	junction_3	16.1314048434171	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCGTTGTCTTTGCTGAT	-1	True	NA	9	True	AATAAA	-17	NA	11742457	11757902	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_+_11742747_11747348_11747471_11749494_11749593_11755407
H1_mix_00011665	chr10	+	2193	15	FSM	ENSG00000123240.17	ENST00000378747.8	3479	15	-99	1385	-95	0	multi-exon	TRUE	canonical	2	10	junction_2	39.3132371122615	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGCTTTTGTGTTATT	150	False	NA	7	True	NA	NA	NA	13100063	13136923	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_13100303_13108137_13108290_13109111_13109289_13110273_13110477_13112452_13112636_13116266_13116341_13118887_13119041_13122384_13122488_13123994_13124111_13125417_13125568_13125945_13126040_13127744_13127904_13132066_13132198_13133501_13133582_13136744
H1_mix_00011666	chr10	+	664	4	FSM	ENSG00000123240.17	ENST00000424614.1	664	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	39.0981670499611	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTCACTGTTGTCTTGTTC	7074	False	NA	NA	False	AATAAA	-18	NA	13116267	13123198	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_13116341_13118887_13119041_13122384_13122488_13122863
H1_mix_00011667	chr10	+	1378	9	NIC	ENSG00000165630.14	novel	1670	10	NA	NA	11	-137	combination_of_known_splicesites	FALSE	canonical	3	8	junction_6	38.8182866056708	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGTCTTTTATGTAATA	6	True	NA	13	True	AGTAAA	-15	NA	13586978	13630722	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_13587153_13597457_13597536_13600243_13600349_13605630_13605745_13610038_13610186_13611614_13611684_13614014_13614087_13616397_13616554_13630259
H1_mix_00011668	chr10	+	985	3	FSM	ENSG00000239665.8	ENST00000614991.4	985	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATTTTACAGATGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	13644223	13655436	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_13645075_13654352_13654428_13655377
H1_mix_00011669	chr10	+	1689	4	FSM	ENSG00000284024.4	ENST00000645667.1	1689	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	214.495273193192	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATTTCATATTATTTG	-16	True	NA	21	True	ATTAAA	-14	NA	14838301	14844737	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_14838460_14839904_14839986_14840074_14840158_14843370
H1_mix_00011671	chr10	+	1761	12	FSM	ENSG00000204740.11	ENST00000377265.3	1761	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	1.21287855128421	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTCTTGTTTTTCTTTG	16	True	NA	NA	False	AATAAA	-15	NA	19489093	19734476	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_19489174_19491516_19491646_19498484_19498647_19531193_19531352_19567501_19567704_19595193_19595458_19607776_19607903_19615856_19615924_19692281_19692362_19692457_19692555_19730705_19730782_19734156
H1_mix_00011672	chr10	+	567	5	Intergenic	novelGene_187	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	1	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAACTGAAGTGAAATAAT	28	False	NA	NA	False	AATAAA	-21	NA	20370513	20609976	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr10_+_20370756_20515688_20515771_20606314_20606375_20607031_20607099_20609860
H1_mix_00011673	chr10	+	4817	22	NIC	ENSG00000078403.17	novel	4955	23	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	27.7224664738239	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGTGCCATTCTCATTTG	11	True	NA	15	True	AATAAA	-19	NA	21524652	21743630	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_21524776_21538832_21538913_21586293_21586349_21595330_21595441_21612347_21612452_21614830_21614925_21617111_21617208_21651672_21651769_21670448_21670705_21673349_21673920_21681331_21681377_21682224_21682258_21713771_21713951_21726243_21726356_21727855_21727929_21730899_21731055_21732898_21733088_21733503_21733593_21733767_21734130_21735138_21735236_21740029_21740237_21741938
H1_mix_00011674	chr10	+	887	1	FSM	ENSG00000286881.1	ENST00000671070.1	296	1	-234	-357	-234	357	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGGCGCGGCGGGACTGG	15	False	NA	NA	False	NA	NA	NA	21526333	21527220	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_21526300_21527200
H1_mix_00011675	chr10	+	2610	11	ISM	ENSG00000078403.17	ENST00000377072.8	5067	24	134	68877	21	1267	5prime_fragment	FALSE	canonical	3	36	junction_1	17.6759723919223	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTAGTTTTAGATTTCTG	28	False	NA	NA	False	AATAAA	-14	NA	21534365	21674753	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_+_21534521_21534644_21534805_21538832_21538913_21586293_21586349_21595330_21595441_21612347_21612452_21614830_21614925_21617111_21617208_21651672_21651769_21670448_21670705_21673349
H1_mix_00011677	chr10	+	4935	24	NNC	ENSG00000078403.17	novel	5143	23	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	32.5904876701538	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGTGCCATTCTCATTTG	22	False	NA	15	True	AATAAA	-19	NA	21534483	21743630	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_21534521_21534644_21534805_21538832_21538913_21586293_21586349_21595330_21595441_21612347_21612452_21614830_21614925_21617111_21617208_21651672_21651769_21670448_21670705_21673349_21673920_21681331_21681377_21682224_21682258_21688494_21688539_21713771_21713951_21726243_21726356_21727855_21727929_21730899_21731055_21732898_21733088_21733503_21733593_21733767_21734130_21735138_21735236_21740029_21740237_21741938
H1_mix_00011678	chr10	+	3938	16	FSM	ENSG00000078403.17	ENST00000438473.6	3938	16	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	35.5640267686324	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGTGCCATTCTCATTTG	5	False	NA	15	True	AATAAA	-19	NA	21617133	21743630	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_21617208_21651672_21651769_21670448_21670705_21673640_21673920_21681331_21681377_21682224_21682258_21713771_21713951_21726243_21726356_21727855_21727929_21730899_21731055_21732898_21733088_21733503_21733593_21733767_21734130_21735138_21735236_21740029_21740237_21741938
H1_mix_00011682	chr10	+	7407	21	FSM	ENSG00000120549.18	ENST00000376454.8	7407	21	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	10.9328633029047	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTTTTTTTCTTTTGA	-14	True	NA	NA	False	AATAAA	-13	NA	24209137	24547843	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_24209264_24219625_24219910_24380868_24381068_24432994_24433194_24438385_24438480_24473227_24474061_24494499_24494605_24495146_24495197_24501378_24501546_24513258_24513435_24520122_24520254_24521781_24521930_24524322_24524765_24527935_24528120_24531829_24531994_24533069_24533238_24536773_24536894_24542692_24542771_24542882_24544482_24544980_24545104_24545826
H1_mix_00011683	chr10	+	287	1	FSM	ENSG00000277563.1	ENST00000621023.1	88	1	64	-263	64	263	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACAGGAGTGGCCTGATTC	NA	False	NA	NA	False	NA	NA	NA	24255309	24255596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_24255300_24255600
H1_mix_00011684	chr10	+	4111	3	FSM	ENSG00000185875.13	ENST00000524413.5	3788	3	-263	-60	-217	60	multi-exon	FALSE	canonical	3	7	junction_1	34	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTCAGTTTCATTTTCT	NA	False	NA	NA	False	NA	NA	NA	25016394	25026724	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_25016790_25021741_25021909_25023175
H1_mix_00011685	chr10	+	330	1	Intergenic	novelGene_189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGGGCATAAGCTGCTTC	NA	False	NA	NA	False	NA	NA	NA	25768964	25769294	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr10_+_25769000_25769300
H1_mix_00011686	chr10	+	243	2	Intergenic	novelGene_190	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGAAGGTAATGTGGAG	NA	False	NA	NA	False	NA	NA	NA	25768964	25771875	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr10_+_25769075_25771742
H1_mix_00011687	chr10	+	3233	26	NIC	ENSG00000095777.17	novel	3376	27	NA	NA	-4	9	combination_of_known_splicesites	TRUE	canonical	3	4	junction_9	8.51295483366381	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTTTGAAAGTATGGTT	-3	True	NA	22	True	AATAAA	-38	NA	25934224	26166248	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_25934329_25935743_25935831_25952093_25952279_25954873_25955009_25996489_25996595_25997158_25997259_26016819_26016897_26021502_26021649_26024021_26024088_26066974_26067075_26068767_26068885_26070110_26070216_26070317_26070402_26088202_26088406_26096380_26096480_26096567_26096683_26120675_26120803_26125397_26125609_26128390_26128539_26143447_26143602_26145445_26145535_26147429_26147560_26153849_26153930_26154745_26154824_26157309_26157516_26166066
H1_mix_00011688	chr10	+	3846	30	FSM	ENSG00000095777.17	ENST00000647478.1	3846	30	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_27	11.0442844397977	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCAGCCCGCCAGTTGTG	1296	False	NA	NA	False	NA	NA	NA	25935787	26212209	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_25935831_25952093_25952279_25954873_25955009_25996489_25996595_25997158_25997259_26016819_26016897_26021502_26021649_26024021_26024088_26026376_26026533_26066974_26067075_26068767_26068885_26070110_26070216_26070317_26070402_26088202_26088406_26096380_26096480_26096567_26096683_26125397_26125609_26128390_26128539_26143447_26143602_26145445_26145535_26147429_26147560_26153849_26153930_26154745_26154824_26157309_26157516_26166066_26166179_26168711_26168875_26170415_26170540_26193204_26193312_26201264_26201306_26211842
H1_mix_00011693	chr10	+	3881	15	NIC	ENSG00000095787.24	novel	5912	14	NA	NA	22	1	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	161.843666694065	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATTACCTTGACTTTT	9	True	NA	NA	False	AATAAA	-20	NA	28533139	28620990	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_28533621_28533997_28534035_28534233_28534347_28535561_28535758_28583398_28583506_28589735_28589852_28590719_28590833_28595732_28596042_28608185_28608432_28610698_28610822_28611773_28611923_28614566_28614686_28616172_28616363_28617656_28617785_28619536
H1_mix_00011694	chr10	+	5385	14	FSM	ENSG00000095787.24	ENST00000679398.1	5486	14	0	101	0	-101	multi-exon	FALSE	canonical	3	24	junction_1	132.854371488742	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTGCAGTTATTTCAGA	5	True	NA	4	True	AATAAA	-14	NA	28533505	28623011	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_28533583_28533997_28534035_28535561_28535758_28583398_28583506_28589735_28589852_28590719_28590833_28595732_28596042_28608185_28608432_28610698_28610822_28611773_28611923_28614566_28614686_28616172_28616363_28617656_28617785_28619536
H1_mix_00011695	chr10	+	240	1	FSM	ENSG00000225976.5	ENST00000497342.1	240	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGGCAAGCTACTTTTCA	9920	False	NA	NA	False	AAGAAA	-13	NA	29697934	29698174	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_29697900_29698200
H1_mix_00011696	chr10	+	527	1	FSM	ENSG00000228816.1	ENST00000432033.1	519	1	30	-38	30	38	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCTATTCCTTGAATTTA	NA	False	NA	NA	False	NA	NA	NA	32944510	32945037	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_32944500_32945000
H1_mix_00011697	chr10	+	990	6	NIC	ENSG00000095794.20	novel	2232	8	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_4	64.8154302616283	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAGCTGGCAAGAATGGT	12	True	NA	-3	True	AATACA	-3	NA	35126995	35211860	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_35127194_35178888_35178987_35179133_35179277_35188199_35188389_35206894_35207052_35211655
H1_mix_00011698	chr10	+	1633	7	NIC	ENSG00000095794.20	novel	2232	8	NA	NA	7	-56	combination_of_known_junctions	FALSE	canonical	3	38	junction_5	60.1537382231746	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTAGTGTTTGGTGCTC	12	True	NA	17	True	AATAGA	-16	NA	35126995	35212379	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_35127194_35148367_35148492_35178888_35178987_35179133_35179277_35188199_35188389_35206894_35207052_35211655
H1_mix_00011699	chr10	+	420	3	FSM	ENSG00000108100.18	ENST00000497692.1	478	3	0	58	0	-58	multi-exon	FALSE	canonical	3	415	junction_2	27	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACATCATCTGAGTACCAG	NA	False	NA	NA	False	TTTAAA	-28	NA	35530195	35566227	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_35530244_35553018_35553186_35566022
H1_mix_00011701	chr10	+	8137	8	FSM	ENSG00000075407.19	ENST00000685332.1	8119	8	-2	-16	1	16	multi-exon	FALSE	canonical	3	19	junction_2	16.9777765905664	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCCTTTAAATGTTTCT	-27	True	NA	27	True	AATAAA	-39	NA	38094334	38124641	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_38094491_38094930_38095225_38095537_38095630_38095743_38095805_38096573_38096633_38114754_38114882_38115194_38115291_38117389
H1_mix_00011702	chr10	+	1244	7	ISM	ENSG00000075407.19	ENST00000685332.1	8119	8	43	8931	29	1	5prime_fragment	FALSE	canonical	3	19	junction_2	17.6139149538085	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTTTTTGAGTTGCTCA	18	True	NA	16	True	ATTAAA	-16	NA	38094379	38115694	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_+_38094491_38094930_38095225_38095537_38095630_38095743_38095805_38096573_38096633_38114754_38114882_38115194
H1_mix_00011703	chr10	+	366	1	FSM	ENSG00000233837.1	ENST00000457262.1	807	1	359	82	359	-82	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGGGATTTCTTCATCC	NA	False	NA	NA	False	NA	NA	NA	42567035	42567401	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_42567000_42567400
H1_mix_00011704	chr10	+	3794	16	FSM	ENSG00000165731.21	ENST00000683007.1	6310	16	199	2317	199	450	multi-exon	FALSE	canonical	3	16	junction_4	6.816320284598	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTTGGAAACCTGGAAC	105	False	NA	NA	False	NA	NA	NA	43104951	43127954	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_43105194_43106375_43106572_43109030_43109231_43111206_43111466_43112098_43112225_43112852_43112964_43113555_43113676_43114479_43114737_43116583_43116732_43118372_43118481_43119530_43119746_43120080_43120204_43121945_43122017_43123670_43123809_43124882_43124983_43126574
H1_mix_00011705	chr10	+	1187	1	FSM	ENSG00000243660.12	ENST00000596267.1	2745	1	1603	-45	1603	45	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCTGAGAAAAGATAAAGCA	NA	False	NA	NA	False	NA	NA	NA	43453522	43454709	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_43453500_43454700
H1_mix_00011706	chr10	+	905	3	FSM	ENSG00000230565.1	ENST00000418966.1	905	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGCTACTATATCCTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	43645941	43648019	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_43646298_43647111_43647210_43647568
H1_mix_00011707	chr10	+	218	2	FSM	ENSG00000012779.12	ENST00000498461.1	604	2	0	386	0	381	multi-exon	FALSE	canonical	3	14	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGCAGGGCCGGGCCCGC	NA	False	NA	NA	False	NA	NA	NA	45443420	45443828	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_45443538_45443727
H1_mix_00011709	chr10	+	4532	30	NNC	ENSG00000172661.20	novel	4623	30	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	83.4233505094702	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCATTTGTTTACTTAC	4	True	NA	1	True	AATAAA	-20	NA	45727265	45792961	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_45727321_45727416_45727540_45728905_45729027_45737982_45738046_45740072_45740247_45743389_45743484_45744820_45744883_45746599_45746648_45750095_45750207_45750750_45750839_45751481_45751554_45752587_45752707_45753179_45753238_45754485_45754546_45754935_45755116_45757011_45757140_45759314_45759402_45763387_45763490_45765678_45765811_45769448_45769619_45773255_45773359_45777272_45777426_45778952_45779136_45784564_45784694_45784820_45784902_45785508_45785632_45787034_45787248_45788870_45789492_45790355_45790534_45792260
H1_mix_00011710	chr10	+	1937	4	NNC	ENSG00000264204.2	novel	2062	8	NA	NA	15286	322	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.2311093340441	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCACCTCTTTTTCATT	NA	False	NA	NA	False	AATAAA	-29	NA	46124906	46131680	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_46124956_46125861_46125900_46129194_46129247_46129882
H1_mix_00011711	chr10	+	2551	10	Fusion	ENSG00000204177.11_ENSG00000243289.1	novel	4294	9	NA	NA	4	5774	multi-exon	TRUE	canonical	0	0	junction_1	46.6476151587624	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCATTGATTTTTGTACA	-3	True	NA	NA	False	CATAAA	-1	NA	46786863	46838250	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr10_+_46786901_46788396_46788601_46789496_46789687_46790961_46791042_46817106_46817176_46819467_46819537_46822177_46822213_46832440_46832477_46835771_46835824_46836471
H1_mix_00011712	chr10	+	203	3	FSM	ENSG00000265630.2	ENST00000585063.2	203	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	6.5	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTAGCCACATAGATTT	NA	False	NA	NA	False	NA	NA	NA	47563603	47569697	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_47563685_47567952_47568009_47569631
H1_mix_00011713	chr10	+	2210	8	NNC	ENSG00000189014.7	novel	2712	8	NA	NA	5672	786	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_2	11.8010722446076	123	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTTACCCTGTGTATG	14	False	NA	10	True	AATAAA	-21	NA	47695378	47731222	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_47695614_47696402_47696511_47710220_47710415_47710581_47710717_47715650_47715858_47719832_47720062_47726840_47726957_47730236
H1_mix_00011714	chr10	+	2520	8	NNC	ENSG00000189014.7	novel	2712	8	NA	NA	16496	786	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.3898536256157	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTTACCCTGTGTATG	158	False	NA	10	True	AATAAA	-21	NA	47706202	47731222	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_47706733_47710220_47710415_47710581_47710717_47715650_47715858_47719832_47720062_47726840_47726957_47728774_47728898_47730236
H1_mix_00011715	chr10	+	3595	3	FSM	ENSG00000107643.17	ENST00000469110.1	3595	3	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	4	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTTGTCTGTAATAGACC	NA	False	NA	40	True	AGTAAA	-30	NA	48425188	48436440	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_48427144_48431192_48431271_48434878
H1_mix_00011716	chr10	+	2421	6	NIC	ENSG00000204152.14	novel	2495	7	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	45.9886942628294	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTCTATGTTGGTTAAT	7	True	NA	NA	False	ATTAAA	-19	NA	49942067	49974850	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_49942301_49952125_49952220_49952448_49952534_49955001_49955061_49958369_49958481_49973011
H1_mix_00011717	chr10	+	5058	14	NIC	ENSG00000178440.8	novel	3593	18	NA	NA	25	29	intron_retention	FALSE	canonical	3	22	junction_7	33.8444055492521	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACATGGCACCTCTTTTT	1	True	NA	14	True	AATAAA	-26	NA	49942081	50010505	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_49942301_49945031_49945091_49952125_49952220_49952448_49952534_49955001_49955061_49958369_49958481_49973011_49973143_49987164_49989377_49991675_49991745_49994394_49994430_50001995_50002097_50004684_50004721_50008024_50008077_50008710
H1_mix_00011718	chr10	+	2462	1	FSM	ENSG00000225137.1	ENST00000435916.1	1838	1	-90	-534	-90	534	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGTCCTTAGAGACCTACA	NA	False	NA	NA	False	AATAAA	-29	NA	50264887	50267349	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_50264900_50267300
H1_mix_00011719	chr10	+	6883	4	FSM	ENSG00000226200.7	ENST00000443374.7	12408	4	0	5525	0	-5525	multi-exon	FALSE	canonical	1	1	junction_3	2.62466929133727	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTGAGTAACAATACCAAC	5	True	NA	NA	False	AATAAA	-33	NA	50624942	50635926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_50625192_50626669_50626806_50629030_50629179_50629576
H1_mix_00011721	chr10	+	411	1	FSM	ENSG00000213659.4	ENST00000412878.2	835	1	264	160	264	-160	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCCAGCTTGATGTGTCC	NA	False	NA	NA	False	NA	NA	NA	51320089	51320500	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_51320100_51320500
H1_mix_00011722	chr10	+	3168	7	NIC	ENSG00000170312.17	novel	1889	8	NA	NA	0	1352	combination_of_known_junctions	TRUE	canonical	3	137	junction_1	596.928434199239	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGCATATATAAATTAAAAG	-1	True	NA	NA	False	AATGAA	-24	NA	60778477	60796204	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_60778669_60780140_60780203_60784704_60784862_60785663_60785788_60791889_60792054_60792147_60792290_60793876
H1_mix_00011723	chr10	+	1110	6	FSM	ENSG00000228065.12	ENST00000598902.6	1710	6	19	581	1	1	multi-exon	FALSE	canonical	0	0	junction_5	10.6207344378814	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATTATTCAGTTCAGTC	13	True	NA	NA	False	AATAAA	-22	NA	65570538	65632247	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_65570760_65571424_65571580_65572934_65573057_65585484_65585803_65615635_65615762_65632079
H1_mix_00011725	chr10	+	431	1	FSM	ENSG00000219932.6	ENST00000482081.1	580	1	96	53	96	-53	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTCATGACATCATAGAT	97	False	NA	NA	False	NA	NA	NA	67874427	67874858	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_67874400_67874900
H1_mix_00011726	chr10	+	3301	8	FSM	ENSG00000096746.18	ENST00000469172.5	3356	8	55	0	55	0	multi-exon	FALSE	canonical	3	735	junction_2	390.329687964063	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGATGTTGATACTTTTTA	2693	False	NA	21	True	AATAAA	-17	NA	68331228	68342273	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_68332217_68337198_68338688_68339139_68339227_68339439_68339556_68341173_68341310_68341584_68341681_68341758_68341852_68341977
H1_mix_00011727	chr10	+	580	4	FSM	ENSG00000096746.18	ENST00000467249.1	566	4	-14	0	0	0	multi-exon	FALSE	canonical	3	639	junction_1	446.367063699323	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGATGGTGGTATGTGT	7	False	NA	NA	False	NA	NA	NA	68332102	68338675	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_68332236_68337198_68337334_68337857_68337997_68338502
H1_mix_00011728	chr10	+	798	1	FSM	ENSG00000213025.2	ENST00000366529.4	357	1	-315	-126	-315	126	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAACAAAATTGTCTT	NA	False	NA	NA	False	AATAAA	-30	NA	68632055	68632853	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_68632100_68632900
H1_mix_00011729	chr10	+	4665	25	NIC	ENSG00000060339.14	novel	4540	24	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	155.475078388789	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGTACTTCCTTCAGAA	22	False	NA	9	True	ATTAAA	-19	NA	68721105	68792377	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_68721157_68722454_68722578_68736875_68737049_68737844_68737890_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68756272_68756484_68757293_68757378_68761006_68761193_68765887_68766080_68771205_68771446_68772987_68773100_68786135_68786219_68786545_68786693_68787926_68788048_68788142_68788329_68789709_68789916_68791206
H1_mix_00011731	chr10	+	3558	22	NNC	ENSG00000060339.14	novel	4658	25	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	146.782190124921	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGAGTAATATTAAGATT	80	False	NA	NA	False	NA	NA	NA	68721163	68788047	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_68721671_68722454_68722578_68736875_68737049_68737844_68737890_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68756272_68756484_68757293_68757378_68761006_68761193_68765887_68766080_68771205_68771446_68772987_68773100_68786135_68786219_68786545_68786693_68787926
H1_mix_00011732	chr10	+	4714	24	NIC	ENSG00000060339.14	novel	4658	25	NA	NA	16	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	177.155779280059	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGTGTACTTCCTTCA	41	False	NA	6	True	ATTAAA	-16	NA	68721270	68792374	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_68721407_68722454_68722578_68736875_68737049_68737844_68737890_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68756272_68756484_68757293_68757378_68761006_68761193_68765887_68766080_68771205_68771446_68772987_68773100_68786135_68786219_68786545_68786693_68787926_68788048_68788142_68788329_68789709_68789916_68791206
H1_mix_00011734	chr10	+	3444	5	NNC	ENSG00000165730.16	novel	3630	4	NA	NA	-58	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	9.86154146165801	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTAGTGAATTTTTT	260	False	NA	14	True	AATATA	-16	NA	68827472	68893060	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_68827666_68828002_68828270_68881957_68882111_68884259_68886619_68892588
H1_mix_00011736	chr10	+	2974	8	FSM	ENSG00000198954.9	ENST00000638119.2	2533	8	-437	-4	-437	0	multi-exon	FALSE	canonical	0	0	junction_2	166.115155533621	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTTTCCTTTTTGTTT	3474	False	NA	NA	False	AATAAA	-29	NA	68988365	69016982	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_68989259_68995203_68995279_69000423_69000523_69005045_69005126_69005731_69005916_69008840_69008926_69010899_69011016_69015540
H1_mix_00011737	chr10	+	2802	6	FSM	ENSG00000198954.9	ENST00000675576.1	2359	6	-437	-6	-437	2	multi-exon	FALSE	canonical	0	0	junction_1	138.470791143837	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTCCTTTTTGTTTTC	3474	False	NA	NA	False	AATAAA	-31	NA	68988365	69016984	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_68989259_69005045_69005126_69005731_69005916_69008840_69008926_69010899_69011016_69015540
H1_mix_00011740	chr10	+	762	3	FSM	ENSG00000171224.9	ENST00000491890.1	746	3	-16	0	-12	0	multi-exon	FALSE	canonical	3	108	junction_1	32	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGAGCAGGCATATTTG	-21	True	NA	NA	False	NA	NA	NA	69630234	69633112	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_69630314_69631479_69631840_69632789
H1_mix_00011741	chr10	+	2633	34	NIC	ENSG00000197467.17	novel	2007	37	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	14.6059977365678	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGCATGATATTTGTGC	-11	True	NA	22	True	AATACA	-19	NA	69801909	69958927	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_69802718_69822368_69822439_69867797_69867806_69887455_69887492_69888303_69888331_69889413_69889441_69894551_69894579_69894674_69894702_69895549_69895577_69897474_69897532_69902747_69902856_69904932_69904960_69905786_69905823_69917288_69917334_69918284_69918318_69919061_69919089_69921881_69921936_69922707_69922795_69923801_69923856_69924962_69925008_69925803_69925873_69927086_69927111_69928936_69929000_69930042_69930088_69930399_69930553_69935349_69935392_69936755_69936783_69937634_69937716_69944124_69944179_69945670_69945725_69947306_69947343_69952881_69952969_69957003_69957043_69958698
H1_mix_00011742	chr10	+	735	2	FSM	ENSG00000099284.15	ENST00000677255.1	2521	2	-47	1833	-47	0	multi-exon	FALSE	canonical	3	618	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATGAGGACACGCAAAGG	15	False	NA	NA	False	NA	NA	NA	70052496	70075830	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_70053001_70075599
H1_mix_00011743	chr10	+	2032	10	FSM	ENSG00000099284.15	ENST00000679349.1	2027	10	-5	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	217.325721293644	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTTCTTACAACATATT	-14	True	NA	14	True	AATAAA	-9	NA	70052840	70112266	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_70053001_70055066_70055178_70075599_70075831_70090059_70090167_70091756_70091955_70093734_70093846_70095653_70095754_70100207_70100298_70109032_70109208_70111517
H1_mix_00011746	chr10	+	275	1	FSM	ENSG00000224725.3	ENST00000430943.1	1201	1	-63	989	-63	-989	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGAGAACACAAGCTGAAG	NA	False	NA	NA	False	NA	NA	NA	70389362	70389637	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_70389400_70389600
H1_mix_00011747	chr10	+	6936	4	NNC	ENSG00000122863.6	novel	6934	3	NA	NA	0	89	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	7.07106781186548	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGAGGTGACTTCCAGCA	-16	True	NA	102	True	NA	NA	NA	71964394	72013647	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_71964695_72005735_72005983_72007171_72011469_72011555
H1_mix_00011748	chr10	+	6965	3	NNC	ENSG00000122863.6	novel	6934	3	NA	NA	839	89	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	7	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGAGGTGACTTCCAGCA	690	False	NA	102	True	NA	NA	NA	71965233	72013647	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_71965476_72005735_72005983_72007171
H1_mix_00011750	chr10	+	491	1	FSM	ENSG00000272627.1	ENST00000608259.1	493	1	-144	146	-144	-146	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTAGCTTTGATTTTGTA	NA	False	NA	NA	False	NA	NA	NA	72766415	72766906	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_72766400_72766900
H1_mix_00011751	chr10	+	1891	12	NNC	ENSG00000138286.15	novel	5455	14	NA	NA	38	-2	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	16.9510720302642	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGTTATAAATACATTTT	36	False	NA	-10	True	AATAAA	-22	NA	73168156	73235450	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_73168387_73174686_73174792_73177845_73177974_73192555_73192699_73193476_73193594_73208618_73208787_73210250_73210439_73228059_73228161_73230421_73230526_73232938_73233164_73234816_73234941_73235192
H1_mix_00011752	chr10	+	635	2	FSM	ENSG00000227540.1	ENST00000394864.2	635	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTCACATTATTACCAGC	356	False	NA	19	True	ATTAAA	-25	NA	73253168	73254349	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_73253255_73253800
H1_mix_00011753	chr10	+	654	3	ISM	ENSG00000221817.11	ENST00000620432.2	1443	6	793	5081	-94	-189	internal_fragment	FALSE	canonical	1	1	junction_1	0.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCAAGTCATCCTCCCAT	761	False	NA	NA	False	AATAGA	-44	NA	73496514	73499638	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_+_73496907_73498649_73498868_73499594
H1_mix_00011754	chr10	+	734	1	FSM	ENSG00000268584.1	ENST00000595595.1	795	1	122	-61	122	61	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGATCGAGACCATCCTG	NA	False	NA	NA	False	NA	NA	NA	73626117	73626851	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_73626100_73626900
H1_mix_00011755	chr10	+	850	2	FSM	ENSG00000250959.3	ENST00000690102.1	833	2	-20	3	2	0	multi-exon	FALSE	canonical	2	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGGGTCCGCACTGCC	-16	True	NA	16	True	AATAAA	-16	NA	73730563	73737787	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_73730874_73737247
H1_mix_00011756	chr10	+	4961	24	Fusion	ENSG00000250959.3_ENSG00000176986.16	novel	4513	24	NA	NA	2	0	multi-exon	FALSE	canonical	1	2	junction_1	114.444825778399	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATTAGCCTCATCTTTA	-16	True	NA	14	True	AATAAA	-15	NA	73730563	73772159	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr10_+_73730874_73744163_73744438_73746804_73747005_73751107_73751244_73759621_73759795_73760017_73760387_73760712_73760850_73763489_73763602_73763855_73763984_73765450_73765590_73765799_73765916_73766085_73766211_73766349_73766542_73766759_73766854_73767053_73767171_73767836_73768008_73768809_73768907_73769006_73769153_73769346_73769486_73769614_73769734_73769835_73770016_73770279_73770472_73770708_73770799_73770954
H1_mix_00011757	chr10	+	2190	3	FSM	ENSG00000196968.11	ENST00000394790.2	2175	3	-15	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	15.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTCTATTTTACTTATT	-25	True	NA	32	True	NA	NA	NA	73772275	73776216	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_73773042_73773189_73773816_73775418
H1_mix_00011758	chr10	+	2669	1	Genic_Genomic	ENSG00000196968.11	novel	NA	NA	NA	NA	3983	5	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGCTTCATTATTTTT	4396	False	NA	21	True	AATAAA	-21	NA	73777587	73780256	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr10_+_73777600_73780300
H1_mix_00011759	chr10	+	4518	19	NNC	ENSG00000214655.11	novel	5919	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	18.1101737998764	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGACCTGGGCCTTTCCC	5679	False	NA	16	True	TATAAA	-24	NA	73791323	73801792	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_73791500_73791858_73792554_73792655_73792853_73793587_73793720_73793864_73794045_73794146_73794331_73794555_73794640_73795538_73795664_73796773_73797015_73797112_73797272_73797376_73797606_73797780_73798071_73798229_73798454_73799001_73799491_73800010_73800171_73800295_73800473_73800639_73800760_73801016_73801196_73801315
H1_mix_00011760	chr10	+	5499	22	FSM	ENSG00000035403.18	ENST00000211998.10	5497	22	-2	0	0	0	multi-exon	FALSE	canonical	2	4	junction_18	373.280456653878	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGGATATGTTACTTTAG	-9	True	NA	15	True	AATAAA	-28	NA	73998113	74120169	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_73998376_74043082_74043154_74070669_74070821_74070974_74071084_74072729_74072853_74074742_74074904_74082453_74082545_74083365_74083514_74089195_74089350_74090022_74090199_74094270_74094462_74095655_74095856_74097203_74097333_74100947_74101098_74103819_74103929_74105050_74105354_74107229_74107355_74108970_74109157_74111908_74112113_74114183_74114388_74114794_74114900_74118022
H1_mix_00011762	chr10	+	1065	1	FSM	ENSG00000214626.2	ENST00000398689.2	1176	1	804	-693	804	693	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCCACATGAGAGCGTTC	NA	False	NA	NA	False	AATAAA	-24	NA	74655759	74656824	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_74655800_74656800
H1_mix_00011763	chr10	+	7160	18	NIC	ENSG00000156650.14	novel	7625	18	NA	NA	-2	0	combination_of_known_junctions	TRUE	canonical	1	1	junction_2	19.369829927459	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTTGTGTCCTGTCATA	9	True	NA	18	True	AATAAA	-20	NA	74826577	75032293	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_74826786_74838682_74838784_74842599_74843479_74959969_74960079_74969659_74969776_74970019_74970102_74972506_74972640_74975398_74975455_74977315_74977438_74979223_74979340_74981786_74981929_74985079_74985242_74989018_74989113_75020581_75020814_75021125_75021286_75021880_75022232_75024957_75025250_75028488
H1_mix_00011764	chr10	+	1424	10	FSM	ENSG00000165637.14	ENST00000543351.5	1424	10	0	0	0	0	multi-exon	FALSE	canonical	1	35	junction_1	898.449404993589	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTAATGGCTCCAAGTA	-14	True	NA	10	True	AATAAA	-11	NA	75210153	75231444	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_75210213_75211133_75211190_75212229_75212299_75214020_75214071_75219062_75219216_75219303_75219357_75220742_75220971_75222251_75222403_75229643_75229702_75230897
H1_mix_00011766	chr10	+	1604	11	NIC	ENSG00000165637.14	novel	1467	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_4	1141.59231339388	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTAATGGCTCCAAGTA	-6	True	NA	10	True	AATAAA	-11	NA	75210803	75231444	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_75210939_75211133_75211190_75212229_75212299_75214020_75214071_75217887_75217992_75219062_75219216_75219303_75219357_75220742_75220971_75222251_75222403_75229643_75229702_75230897
H1_mix_00011767	chr10	+	700	6	NNC	ENSG00000148655.15	novel	393	3	NA	NA	-33338	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	10.7443008148506	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATAGCCCACATTGCCTCT	NA	False	NA	NA	False	AATAAA	-44	NA	76002667	76557372	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_76002734_76036007_76036135_76047163_76047304_76058665_76058784_76324400_76324486_76557208
H1_mix_00011768	chr10	+	385	3	FSM	ENSG00000148655.15	ENST00000611306.1	393	3	2	6	2	-6	multi-exon	FALSE	canonical	0	0	junction_1	15	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCTGCCTACTTGCTGT	NA	False	NA	NA	False	NA	NA	NA	76036007	76058783	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_76036135_76047163_76047304_76058665
H1_mix_00011769	chr10	+	327	1	FSM	ENSG00000277981.1	ENST00000615610.1	770	1	197	246	197	-246	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCCAGAGTCCGAGCAGAA	NA	False	NA	NA	False	AAGAAA	-34	NA	77738442	77738769	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_77738400_77738800
H1_mix_00011770	chr10	+	393	1	FSM	ENSG00000234612.1	ENST00000446960.1	382	1	-11	0	-11	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTAAAGGCTGCCTGGATT	NA	False	NA	NA	False	AAGAAA	-16	NA	77953483	77953876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_77953500_77953900
H1_mix_00011771	chr10	+	690	1	FSM	ENSG00000272489.1	ENST00000606384.1	1595	1	431	474	431	-474	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCCTGTTCTTCTAAGG	NA	False	NA	NA	False	NA	NA	NA	79663622	79664312	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_79663600_79664300
H1_mix_00011772	chr10	+	1975	4	FSM	ENSG00000133678.14	ENST00000467529.5	1963	4	-12	0	-12	0	multi-exon	FALSE	canonical	3	14	junction_1	196.224927627002	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTCTTGTATTTGTCA	-15	True	NA	32	True	AATAAA	-26	NA	80079257	80092557	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_80079308_80081840_80081945_80082144_80082205_80090796
H1_mix_00011775	chr10	+	7404	14	NIC	ENSG00000107779.14	novel	6417	13	NA	NA	-3647	-2783	combination_of_known_junctions	TRUE	canonical	3	51	junction_3	128.692744493258	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCCTTGTTATCTCAAGA	NA	False	NA	4	True	AATAAA	-18	NA	86752953	86925186	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_86756920_86838864_86838980_86843405_86843511_86875866_86876086_86890061_86890225_86892126_86892230_86899793_86899891_86900026_86900127_86912239_86912385_86917133_86917327_86919171_86919470_86921519_86921696_86923375_86923507_86923593
H1_mix_00011776	chr10	+	5632	14	FSM	ENSG00000107779.14	ENST00000638429.1	5632	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_13	115.601795608585	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTAGGAGTGACTTTGAC	-9	True	NA	-3	True	AATAAA	-6	NA	86756600	86932825	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_86756920_86838864_86838980_86875866_86876086_86890061_86890225_86892126_86892230_86899793_86899891_86900026_86900127_86912239_86912385_86917133_86917327_86919171_86919470_86921519_86921696_86923375_86923507_86923593_86924642_86930300
H1_mix_00011801	chr10	+	1322	7	ISM	ENSG00000171307.19	ENST00000370846.8	1280	8	5556	-281	4	0	3prime_fragment	FALSE	canonical	3	103	junction_4	179.997839493207	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTAGCTTCTCACTCT	5539	False	NA	18	True	AATAAA	-18	NA	97451752	97457366	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_+_97451919_97452089_97452285_97452414_97452504_97452894_97452924_97455601_97455784_97455973_97456045_97456776
H1_mix_00011817	chr10	+	6410	40	FSM	ENSG00000107862.7	ENST00000677240.1	6391	40	-19	0	4	0	multi-exon	FALSE	canonical	2	9	junction_10	26.6376321226551	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTACCAGCATCATTGTCT	NA	False	NA	24	True	AATAAA	-6	NA	102245501	102382885	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_102245782_102258928_102259035_102260049_102260117_102344050_102344183_102351255_102351375_102351842_102351952_102352457_102352519_102353599_102353655_102358038_102358187_102358505_102358730_102359266_102359436_102360183_102360396_102361021_102361121_102361717_102361913_102362474_102362665_102363255_102363397_102363709_102363799_102365396_102365600_102366382_102366507_102367084_102367211_102367477_102367561_102368217_102368455_102368738_102368833_102369210_102369388_102369710_102369776_102369860_102369985_102370173_102370246_102370383_102370479_102370706_102370861_102375358_102375585_102376271_102376433_102376559_102376801_102376934_102377129_102379283_102379435_102379520_102379652_102379852_102379955_102380248_102380363_102380505_102380687_102381126_102381256_102382055
H1_mix_00011820	chr10	+	1178	3	FSM	ENSG00000269609.6	ENST00000669625.1	1178	3	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_2	52.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGGTGATTTGTTACA	123	False	NA	26	True	AATAAA	-24	NA	102449979	102456297	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_+_102450023_102450186_102450361_102455336
H1_mix_00011842	chr10	+	2699	10	NIC	ENSG00000119979.18	novel	2829	12	NA	NA	0	-1	intron_retention	FALSE	canonical	3	12	junction_2	174.494472656455	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTTTTAGGTGGGTGAC	15	True	NA	9	True	AATAAA	-22	NA	119104112	119137983	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_+_119104198_119104763_119105023_119107967_119108165_119111848_119111929_119117518_119117668_119120340_119120453_119123468_119123570_119129514_119129623_119132514_119132610_119136470
H1_mix_00011853	chr10	+	5596	10	NNC	ENSG00000019995.6	novel	5695	9	NA	NA	-25224	-135	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_9	44.726604340174	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAGCAACTTTGTTTTTT	5	True	NA	NA	False	ATTAAA	-16	NA	124916898	124988054	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_+_124917273_124942456_124943308_124966593_124966782_124971964_124972119_124973644_124973717_124974199_124974399_124981708_124981830_124983174_124983305_124983458_124983689_124984777
H1_mix_00011867	chr10	-	552	3	Antisense	novelGene_ENSG00000047056.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	10.5	53	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTGATATGGAGAAACTC	344	False	NA	NA	False	AATAAA	-10	NA	1056361	1053515	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr10_-_1053937_1054167_1054246_1056308
H1_mix_00011868	chr10	-	578	1	FSM	ENSG00000273001.1	ENST00000607898.1	578	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACGCTGCGATAATATTTAA	NA	False	NA	NA	False	AATAAA	-16	NA	3066001	3065423	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_3065400_3066000
H1_mix_00011870	chr10	-	3413	27	NIC	ENSG00000107959.17	novel	3427	27	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_22	32.4249702887274	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGCTTGAGTCATTATT	10	False	NA	-4	True	AATAAA	-18	NA	3172772	3137727	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_3138125_3138234_3138338_3138903_3139050_3140686_3140813_3143388_3143502_3144291_3144367_3145595_3145717_3147149_3147251_3147571_3147738_3147986_3148064_3148170_3148292_3149620_3149754_3151246_3151364_3155590_3155730_3156929_3157065_3157434_3157532_3158039_3158154_3158913_3159043_3159847_3159937_3160203_3160331_3163724_3163886_3165237_3165331_3165412_3165528_3166228_3166381_3166935_3167043_3170103_3170207_3172716
H1_mix_00011871	chr10	-	834	6	FSM	ENSG00000057608.17	ENST00000447751.5	834	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	784.019234457931	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTTTTCATGGAGTGGC	9027	False	NA	-1	True	AGTAAA	-28	NA	5785922	5765848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_5766153_5766240_5766296_5768212_5768385_5773841_5773942_5785141_5785274_5785851
H1_mix_00011873	chr10	-	3904	4	Antisense	novelGene_ENSG00000285845.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	1	junction_3	7.78888096369861	68	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGAGAATGACTGCTGCA	NA	False	NA	-13	True	AATAAA	-12	NA	6802544	6786871	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr10_-_6790058_6791645_6792075_6792455_6792555_6802354
H1_mix_00011874	chr10	-	7205	17	NIC	ENSG00000198879.13	novel	7922	21	NA	NA	122790	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_16	3.35177191944798	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTGTTTGGGTCTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	7285955	7158623	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_7163911_7170927_7171057_7171894_7172159_7172494_7172662_7175989_7176166_7188623_7188734_7197547_7197688_7200413_7200485_7202479_7202523_7205814_7205929_7220410_7220538_7227854_7227938_7243557_7243706_7248547_7248650_7276891_7276990_7283903_7283960_7285865
H1_mix_00011875	chr10	-	1311	12	NIC	ENSG00000151657.12	novel	6360	13	NA	NA	13	-68	combination_of_known_splicesites	FALSE	canonical	3	18	junction_11	54.6378006164079	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGGTATCAAACTATGTAA	-7	True	NA	-113	True	NA	NA	NA	7787980	7755902	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_7756143_7759889_7759991_7762456_7762557_7763722_7763792_7766052_7766104_7769215_7769346_7774830_7774892_7775750_7775800_7778837_7779020_7780055_7780179_7780263_7780308_7787819
H1_mix_00011876	chr10	-	5266	22	NNC	ENSG00000151461.20	novel	5168	22	NA	NA	-98	2	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_17	50.2447524363718	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGCGTGGTGTTGTTTTG	326	False	NA	-3	True	AATAAA	-16	NA	12042907	11920019	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_11921308_11929864_11929986_11931640_11931783_11936544_11936713_11942664_11942764_11943063_11943169_11948368_11948509_11952065_11952250_11955231_11955508_11956319_11956524_11959170_11959357_11964008_11964126_11967340_11967455_11979056_11979166_11997671_11997758_11999905_12000010_12001675_12001824_12004529_12004728_12014023_12014185_12028744_12029525_12035058_12035442_12042754
H1_mix_00011878	chr10	-	794	8	NIC	ENSG00000165609.13	novel	919	11	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	42	junction_2	604.951237704329	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGGTGGTGGTATGGAA	28	True	NA	-13	True	AATAAA	-12	NA	12195841	12167575	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_12167812_12170716_12170771_12172764_12172867_12177792_12177901_12179082_12179133_12184888_12184957_12186228_12186333_12195769
H1_mix_00011879	chr10	-	1699	8	FSM	ENSG00000107537.14	ENST00000396913.6	1732	8	33	0	33	0	multi-exon	FALSE	canonical	1	3	junction_7	141.533438754643	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTTTCTCCTGTGATTTC	2626	False	NA	-4	True	AATAAA	-23	NA	13299730	13277795	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_13278355_13280975_13281111_13283689_13283840_13288359_13288542_13291830_13291913_13294427_13294597_13295495_13295607_13299419
H1_mix_00011880	chr10	-	4936	3	NNC	ENSG00000086475.15	novel	3265	9	NA	NA	14861	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	1671.5	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTGTTGAGCTTTTTTT	NA	False	NA	-21	True	AATAAA	-29	NA	13325929	13317427	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_13319357_13322834_13323048_13323135
H1_mix_00011881	chr10	-	3585	10	NNC	ENSG00000086475.15	novel	3265	9	NA	NA	-319	0	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_7	1562.99832942258	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTGTTGAGCTTTTTTT	5	True	NA	-21	True	AATAAA	-29	NA	13347677	13317427	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_13319357_13322834_13323048_13328350_13328451_13329697_13329789_13333816_13333972_13336242_13336346_13338704_13338809_13340690_13340909_13344757_13345029_13347276
H1_mix_00011882	chr10	-	3367	9	NNC	ENSG00000086475.15	novel	3265	9	NA	NA	-319	0	at_least_one_novel_splicesite	FALSE	canonical	3	103	junction_8	1311.92899483928	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTGTTGAGCTTTTTTT	5	True	NA	-21	True	AATAAA	-29	NA	13347677	13317427	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_13319357_13322834_13323048_13328350_13328451_13329697_13329789_13333816_13333972_13336242_13336346_13338704_13338809_13344757_13345029_13347276
H1_mix_00011883	chr10	-	2594	9	NNC	ENSG00000086475.15	novel	2387	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	269	junction_2	1042.48584372882	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTCTTGTATAATCAGAT	13	True	NA	-18	True	AATAAA	-17	NA	13348280	13318079	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_13319357_13322834_13323042_13328350_13328451_13329697_13329789_13333816_13333972_13336242_13336351_13338704_13338809_13344757_13345029_13347999
H1_mix_00011884	chr10	-	1287	3	FSM	ENSG00000151474.23	ENST00000495956.2	1287	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	3	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAAAACATAAAA	NA	False	NA	-33	True	NA	NA	NA	13657123	13646333	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_13647036_13654415_13654513_13656635
H1_mix_00011885	chr10	-	2155	4	FSM	ENSG00000065809.14	ENST00000492700.5	558	4	27	-1624	27	0	multi-exon	FALSE	canonical	1	4	junction_3	73.2908968123297	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGCTCTACAGTAATTT	2711	False	NA	NA	False	AATAAA	-22	NA	14556387	14519512	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_14521307_14521868_14522020_14530331_14530516_14556361
H1_mix_00011886	chr10	-	581	4	FSM	ENSG00000185267.10	ENST00000466269.1	581	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1.24721912892465	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATTTGGTCTCATGCTT	2282	False	NA	NA	False	NA	NA	NA	14836290	14819887	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_14820159_14825478_14825621_14828144_14828273_14836250
H1_mix_00011887	chr10	-	3417	3	NNC	ENSG00000152457.18	novel	5960	14	NA	NA	-3989	-491	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	2.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCTTTTATAGTCTTACT	8369	False	NA	NA	False	AATACA	-14	NA	14915311	14905103	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_14905704_14912320_14912841_14913014
H1_mix_00011889	chr10	-	2566	13	NIC	ENSG00000152465.18	novel	5003	12	NA	NA	100	202	combination_of_known_junctions	TRUE	canonical	3	12	junction_11	28.9898210105241	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAAGTAACTTTTCCATA	189	False	NA	NA	False	AGTAAA	-19	NA	15168528	15105567	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_15106699_15109701_15109840_15112795_15112964_15119342_15119514_15128349_15128459_15130141_15130313_15132816_15132934_15133052_15133145_15133244_15133364_15135273_15135419_15140986_15141030_15141421_15141558_15168502
H1_mix_00011890	chr10	-	3840	7	NIC	ENSG00000148468.17	novel	4182	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	74.16348307774	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTTTGTGGTCATTTGA	22	True	NA	-4	True	AATAAA	-19	NA	15371062	15211642	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_15214602_15220943_15221061_15248638_15248816_15254720_15254880_15275854_15275948_15283877_15284106_15370955
H1_mix_00011891	chr10	-	410	3	Antisense	novelGene_ENSG00000226140.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	3.5	18	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAGAGACTGCGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	16387058	16250926	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr10_-_16250973_16338625_16338734_16386802
H1_mix_00011893	chr10	-	1109	2	FSM	ENSG00000229124.8	ENST00000661048.1	1109	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGATTGTTGTGAGAATAAA	7994	False	NA	-85	True	AATATA	-21	NA	17229420	17214331	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_17215365_17229344
H1_mix_00011894	chr10	-	2172	11	NNC	ENSG00000241058.4	novel	2166	11	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_6	30.2953791856118	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGATGTGGTTATGAAAA	26	True	NA	-16	True	AATAAA	-9	NA	18651587	18545566	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_18546146_18548111_18548238_18551822_18551972_18585948_18586094_18596207_18596328_18609844_18609927_18614447_18614614_18616183_18616294_18642475_18642556_18648489_18648646_18651128
H1_mix_00011896	chr10	-	1109	11	FSM	ENSG00000078114.19	ENST00000674540.1	1515	11	0	406	0	-406	multi-exon	FALSE	canonical	1	3	junction_10	4.19046536795139	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCAAAATCTTTTGATT	1725	False	NA	NA	False	NA	NA	NA	20960012	20859688	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_20859827_20868663_20868766_20869739_20869842_20880793_20880905_20888096_20888208_20889844_20889950_20896957_20897030_20899377_20899451_20957730_20957816_20958845_20958967_20959923
H1_mix_00011897	chr10	-	1695	1	FSM	ENSG00000223984.1	ENST00000453465.1	1695	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGACAAGTAAGGGCTTGAA	NA	False	NA	NA	False	NA	NA	NA	21626286	21624591	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_21624600_21626300
H1_mix_00011898	chr10	-	7230	25	NIC	ENSG00000107863.20	novel	7381	26	NA	NA	70	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_24	20.0723950157092	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCATGGCTTGAAACTT	1935	False	NA	-14	True	AATAAA	-16	NA	24722690	24583613	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_24586107_24589270_24589303_24591224_24591331_24591641_24591684_24591886_24592013_24594949_24595040_24595116_24595191_24595716_24595796_24595887_24596044_24596739_24596883_24597446_24597584_24597944_24598010_24600645_24600931_24601977_24602104_24604311_24604349_24607498_24607602_24607744_24607904_24619472_24621370_24629995_24630051_24633401_24633481_24635010_24635104_24666984_24667010_24670217_24670398_24721836_24722280_24722485
H1_mix_00011899	chr10	-	250	1	FSM	ENSG00000279212.1	ENST00000623958.1	2535	1	-79	2364	-79	-2364	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTAACCTTCCCCGGGGC	NA	False	NA	NA	False	NA	NA	NA	26697704	26697454	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_26697500_26697700
H1_mix_00011901	chr10	-	2263	11	NNC	ENSG00000169126.16	novel	555	3	NA	NA	23	-2820	at_least_one_novel_splicesite	TRUE	canonical	3	7	junction_1	10.1980390271856	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTTTTTTACAGAAAACC	4	True	NA	NA	False	AATAAA	-18	NA	27999056	27959868	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_27960645_27961567_27961716_27968922_27969019_27971107_27971314_27981465_27981583_27983842_27983980_27984183_27984291_27985018_27985212_27987385_27987544_27994918_27995181_27998993
H1_mix_00011902	chr10	-	3497	17	NNC	ENSG00000150054.19	novel	5138	17	NA	NA	3	1433	at_least_one_novel_splicesite	TRUE	canonical	2	2	junction_7	19.8272815521947	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCCTAATTTAAAAGAGTA	3	True	NA	NA	False	AATAAA	-18	NA	28303061	28052627	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_28054245_28056479_28056624_28058494_28058604_28059649_28059744_28069771_28069853_28089670_28089842_28119650_28119713_28120193_28120391_28120593_28120669_28124030_28124117_28125009_28125092_28131559_28131692_28147482_28147564_28149981_28150060_28202152_28202272_28238567_28238736_28302860
H1_mix_00011903	chr10	-	7028	36	NIC	ENSG00000197321.16	novel	7275	39	NA	NA	-85	3	combination_of_known_junctions	FALSE	canonical	2	7	junction_35	15.4609184720702	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAATTCCAAGCATGTT	1	True	NA	-11	True	AATAAA	-35	NA	29737044	29457344	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_29458334_29458433_29458590_29462276_29462402_29463491_29463636_29465594_29465751_29467741_29467876_29470275_29470484_29471137_29471244_29473837_29473990_29480536_29480814_29481583_29481729_29484655_29484832_29486084_29486231_29486409_29486558_29487162_29487300_29488600_29488757_29490846_29491020_29493213_29493392_29494913_29495001_29495091_29495182_29499115_29499264_29512734_29512862_29522409_29522636_29523450_29524028_29524471_29524716_29529704_29529845_29530606_29530669_29531253_29531289_29550596_29551264_29554782_29554935_29555050_29555109_29563200_29563293_29569254_29569313_29657968_29658069_29686552_29686652_29736684
H1_mix_00011904	chr10	-	4906	19	FSM	ENSG00000165322.18	ENST00000375245.8	4958	19	19	33	19	0	multi-exon	TRUE	canonical	3	72	junction_11	33.7889692717082	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTAGTAAGTCTTCCTT	11	False	NA	-9	True	AATAAA	-18	NA	31928857	31805436	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_31807833_31808648_31808752_31808993_31809129_31809229_31809308_31810648_31810748_31812706_31812824_31814258_31814362_31817787_31817887_31820386_31820489_31826303_31826386_31831738_31831801_31839304_31839320_31839636_31839712_31843460_31843587_31852516_31852598_31861394_31861659_31908171_31908927_31910524_31910564_31928682
H1_mix_00011906	chr10	-	905	1	FSM	ENSG00000234335.1	ENST00000446897.1	772	1	-83	-50	-83	50	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGGCATGATTAATAGCC	NA	False	NA	NA	False	ATTAAA	-5	NA	32103376	32102471	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_32102500_32103400
H1_mix_00011907	chr10	-	348	1	FSM	ENSG00000217094.2	ENST00000405422.2	495	1	189	-42	189	42	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTAGTTCAGGAGAACAC	NA	False	NA	NA	False	NA	NA	NA	32188628	32188280	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_32188300_32188600
H1_mix_00011908	chr10	-	871	2	FSM	ENSG00000120616.16	ENST00000469059.2	871	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCTTGTCTTTTGGTTTT	19	True	NA	-1	True	ATTAAA	-16	NA	32347121	32345111	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_32345624_32346762
H1_mix_00011909	chr10	-	402	1	FSM	ENSG00000231245.2	ENST00000426049.1	402	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1252	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGGAAAAAGTAAAAGTTA	NA	False	NA	NA	False	NA	NA	NA	32511737	32511335	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_32511300_32511700
H1_mix_00011911	chr10	-	585	3	FSM	ENSG00000099250.18	ENST00000418675.5	579	3	0	-6	0	6	multi-exon	FALSE	canonical	3	6	junction_1	43.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTGGCTTTCTTTATCCT	NA	False	NA	NA	False	AATAAA	-45	NA	33202995	33194360	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_33194781_33197649_33197710_33202890
H1_mix_00011912	chr10	-	5880	25	NIC	ENSG00000148498.16	novel	5971	25	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	54	junction_8	72.8365273899176	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGGTGTCTCTGGTGT	2	True	NA	-3	True	AATAAA	-19	NA	34815296	34109561	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_34111563_34119612_34119741_34131462_34131584_34269656_34269900_34284134_34284246_34317106_34317339_34331116_34331345_34336198_34336244_34337364_34337427_34341626_34341817_34347964_34348116_34359146_34359318_34360070_34360260_34372497_34372537_34374873_34375003_34377966_34378107_34382539_34382923_34384128_34384255_34399329_34399414_34401825_34401918_34450316_34450449_34470084_34470264_34516978_34517160_34696317_34696420_34814875
H1_mix_00011913	chr10	-	5960	24	FSM	ENSG00000148498.16	ENST00000545693.5	5962	24	0	2	0	-1	multi-exon	FALSE	canonical	3	111	junction_4	64.030533831602	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGGTGTCTCTGGTGT	-27	True	NA	-3	True	AATAAA	-19	NA	34815325	34109561	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_34111563_34119612_34119741_34131462_34131584_34269656_34269900_34284134_34284246_34317106_34317339_34331116_34331345_34336198_34336244_34337274_34337427_34341626_34341817_34347964_34348116_34359146_34359318_34360070_34360260_34374873_34375003_34377966_34378107_34382539_34382923_34384128_34384255_34399329_34399414_34401825_34401918_34450316_34450449_34470084_34470264_34516978_34517160_34696317_34696420_34814875
H1_mix_00011914	chr10	-	5847	24	NIC	ENSG00000148498.16	novel	5971	25	NA	NA	77	-2	combination_of_known_junctions	FALSE	canonical	3	32	junction_7	76.2596301520423	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTGGTGTCTCTGGTG	79	False	NA	-4	True	AATAAA	-18	NA	34815219	34109562	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_34111563_34119612_34119741_34131462_34131584_34269656_34269900_34284134_34284246_34317106_34317339_34331116_34331345_34337274_34337427_34341626_34341817_34347964_34348116_34359146_34359318_34360070_34360260_34372497_34372537_34374873_34375003_34377966_34378107_34382539_34382923_34384128_34384255_34399329_34399414_34401825_34401918_34450316_34450449_34470084_34470264_34516978_34517160_34696317_34696420_34814875
H1_mix_00011915	chr10	-	5482	22	NIC	ENSG00000148498.16	novel	5971	25	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	78.750531798226	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTGGTGTCTCTGGTG	3	True	NA	-4	True	AATAAA	-18	NA	34815295	34109562	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_34111563_34119612_34119741_34131462_34131584_34317106_34317339_34331116_34331345_34336198_34336244_34337274_34337427_34341626_34341817_34347964_34348116_34359146_34359318_34360070_34360260_34372497_34372537_34374873_34375003_34377966_34378107_34382539_34382923_34384128_34384255_34399329_34399414_34401825_34401918_34470084_34470264_34516978_34517160_34696317_34696420_34814875
H1_mix_00011916	chr10	-	5864	24	NIC	ENSG00000148498.16	novel	5869	24	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	30	junction_4	85.123661852527	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTGGTGTCTCTGGTG	2	True	NA	-4	True	AATAAA	-18	NA	34815296	34109562	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_34111563_34119612_34119741_34131462_34131584_34269656_34269900_34317106_34317339_34331116_34331345_34336198_34336244_34337277_34337427_34341626_34341817_34347955_34348116_34359146_34359318_34360070_34360260_34372497_34372537_34374873_34375003_34377966_34378107_34382539_34382923_34384128_34384255_34399329_34399414_34401825_34401918_34450316_34450449_34470084_34470264_34516978_34517160_34696317_34696420_34814875
H1_mix_00011917	chr10	-	3280	19	NIC	ENSG00000148498.16	novel	3518	21	NA	NA	20	-14	combination_of_known_junctions	FALSE	canonical	3	108	junction_15	60.6530560637841	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTACTTTTAATGAATTCT	22	True	NA	NA	False	TTTAAA	-11	NA	34815276	34312277	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_34312383_34317106_34317339_34331116_34331345_34336198_34336244_34337274_34337427_34341626_34341817_34347964_34348116_34359146_34359318_34360070_34360260_34374873_34375003_34377966_34378107_34382539_34382923_34384128_34384255_34399329_34399414_34401825_34401918_34470084_34470264_34516978_34517160_34696317_34696420_34814875
H1_mix_00011918	chr10	-	3235	19	NNC	ENSG00000148498.16	novel	3518	21	NA	NA	68	-20	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	97.8020803131521	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAAATTTACTTTTAATG	70	False	NA	NA	False	TTTAAA	-5	NA	34815228	34312283	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_34312383_34317106_34317339_34331116_34331345_34336198_34336241_34337274_34337427_34341626_34341817_34347955_34348116_34359146_34359318_34360070_34360260_34377966_34378107_34382539_34382923_34384128_34384255_34399329_34399414_34401825_34401918_34450316_34450449_34470084_34470264_34516978_34517160_34696317_34696420_34814875
H1_mix_00011919	chr10	-	3467	21	NIC	ENSG00000148498.16	novel	3518	21	NA	NA	7	-20	combination_of_known_junctions	FALSE	canonical	3	74	junction_6	67.7932703149804	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAAATTTACTTTTAATG	9	True	NA	NA	False	TTTAAA	-5	NA	34815289	34312283	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_34312383_34317106_34317339_34331116_34331345_34336198_34336244_34337274_34337427_34341626_34341817_34347955_34348116_34359146_34359318_34360070_34360260_34372497_34372537_34374873_34375003_34377966_34378107_34382539_34382923_34384128_34384255_34399329_34399414_34401825_34401918_34450316_34450449_34470084_34470264_34516978_34517160_34696317_34696420_34814875
H1_mix_00011920	chr10	-	236	1	FSM	ENSG00000215184.2	ENST00000399739.2	407	1	-107	278	-107	-278	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACCAAGCCCATCTTTG	NA	False	NA	NA	False	NA	NA	NA	34676148	34675912	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_34675900_34676100
H1_mix_00011921	chr10	-	2533	1	FSM	ENSG00000229644.6	ENST00000440465.1	2514	1	-26	7	-26	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGTTCCATTCCAAC	NA	False	NA	NA	False	ATTAAA	-25	NA	36524260	36521727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_36521700_36524300
H1_mix_00011922	chr10	-	1705	7	FSM	ENSG00000198105.16	ENST00000485560.5	1705	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	63.3651236003599	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTAAGTGCCATCCAGTCT	537	False	NA	NA	False	AAAACA	-13	NA	37857551	37802822	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_37803693_37803832_37803944_37833024_37833117_37837616_37837713_37837984_37838112_37856295_37856338_37857184
H1_mix_00011924	chr10	-	209	1	FSM	ENSG00000226086.5	ENST00000495197.1	822	1	415	198	415	-198	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGTGGACCAGCAGCAT	NA	False	NA	NA	False	NA	NA	NA	38080462	38080253	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_38080300_38080500
H1_mix_00011925	chr10	-	8799	8	NIC	ENSG00000234420.8	novel	2657	8	NA	NA	3	-44	intron_retention	FALSE	canonical	1	1	junction_7	6.12788873986492	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTCAATAAAGCTTCCAA	-18	True	NA	40	True	TTTAAA	-21	NA	42552805	42513553	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_42521128_42523181_42523306_42523611_42523739_42550556_42550616_42551399_42551463_42551576_42551815_42551989_42552597_42552798
H1_mix_00011926	chr10	-	6110	6	NNC	ENSG00000196693.15	novel	5982	5	NA	NA	-50	2	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	34.7136860618402	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAACATCTTGTTTCTGT	-5	True	NA	-7	True	AATAAA	-24	NA	42638620	42589104	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_42594697_42614281_42614359_42631928_42632025_42632294_42632440_42636919_42636973_42638473
H1_mix_00011927	chr10	-	2399	2	FSM	ENSG00000196793.14	ENST00000306006.10	2389	2	5	-15	5	15	multi-exon	FALSE	canonical	3	10	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATACTTCTTTCCAGT	6140	False	NA	14	True	NA	NA	NA	43568454	43556328	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_43558172_43567898
H1_mix_00011929	chr10	-	1925	4	NNC	ENSG00000107562.17	novel	1052	4	NA	NA	0	10549	intron_retention	FALSE	non_canonical	0	0	junction_1	66.9394419523265	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTTTCCAAGTAAAATAAGA	26	False	NA	NA	False	NA	NA	NA	44385070	44359615	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_44359641_44377067_44378724_44380762_44380881_44384944
H1_mix_00011930	chr10	-	2987	9	NIC	ENSG00000172671.20	novel	3760	10	NA	NA	-6	-20	combination_of_known_junctions	FALSE	canonical	3	32	junction_8	11.9523794702143	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATAAAATAGATGAATAATA	15	True	NA	NA	False	ATTAAA	-27	NA	45672738	45617784	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_45618261_45624582_45624638_45625950_45627106_45639815_45639964_45648293_45648535_45651965_45652034_45652983_45653060_45663541_45663843_45672271
H1_mix_00011931	chr10	-	1521	1	FSM	ENSG00000237840.6	ENST00000608637.1	956	1	62	-627	-8	627	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGACAAAAGTTTGGGTGT	NA	False	NA	NA	False	AGTAAA	-18	NA	45727169	45725648	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_45725600_45727200
H1_mix_00011933	chr10	-	4006	22	Fusion	ENSG00000188234.15_ENSG00000239883.9	novel	1758	12	NA	NA	61	2	multi-exon	FALSE	canonical	1	2	junction_9	42.5570445498313	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCACCTCTTTTTCATT	120	False	NA	-6	True	AATAAA	-30	NA	45972301	45825591	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr10_-_45827391_45828028_45828081_45831393_45831430_45834015_45834117_45841652_45841688_45844325_45844395_45846686_45846756_45847124_45847313_45847859_45847955_45853654_45853951_45854802_45854896_45862985_45863115_45888164_45888313_45892431_45892508_45896183_45896245_45900346_45900427_45910548_45910707_45916078_45916172_45946836_45946912_45953122_45953207_45962810_45962995_45972216
H1_mix_00011934	chr10	-	3514	11	NNC	ENSG00000266412.6	novel	3489	10	NA	NA	0	82575	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	229.702525018773	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	8	True	NA	NA	False	NA	NA	NA	46023455	45922512	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_45922540_46005089_46006598_46009410_46009552_46010222_46011207_46012882_46013027_46013549_46013640_46014443_46014553_46014853_46014943_46015125_46015267_46016539_46016695_46023329
H1_mix_00011935	chr10	-	3486	11	NNC	ENSG00000266412.6	novel	3461	10	NA	NA	0	82575	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	190.193164966568	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	-14	True	NA	NA	False	NA	NA	NA	46030623	45922512	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_45922540_46005089_46006598_46009410_46009552_46010222_46011207_46012882_46013027_46013549_46013640_46014443_46014553_46014853_46014943_46015125_46015267_46016539_46016695_46030525
H1_mix_00011936	chr10	-	4405	10	FSM	ENSG00000266412.6	ENST00000583565.5	2371	10	24	-2058	24	851	multi-exon	FALSE	canonical	2	5	junction_9	198.916509565641	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGTCTAACGGCTGACCT	3950	False	NA	NA	False	AATGAA	-31	NA	46019513	46004236	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_46006598_46009410_46009552_46010222_46011207_46012882_46013027_46013549_46013640_46014443_46014553_46014853_46014943_46015125_46015267_46016539_46016695_46019322
H1_mix_00011937	chr10	-	332	3	FSM	ENSG00000263639.7	ENST00000581478.5	386	3	0	54	0	-48	multi-exon	FALSE	canonical	1	1	junction_1	0.5	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATGATTGTGTAGCCATG	0	True	NA	-54	True	NA	NA	NA	46046269	46033360	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_46033552_46039985_46040092_46046234
H1_mix_00011938	chr10	-	9494	3	NNC	ENSG00000204175.6	novel	9274	3	NA	NA	245	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	22.5	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTTAGTGTTGCCTTAAA	223	False	NA	-2	True	ATTAAA	-25	NA	46556413	46541735	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_46550743_46554584_46554712_46556053
H1_mix_00011939	chr10	-	1998	4	NNC	ENSG00000204175.6	novel	9274	3	NA	NA	-307	-7308	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	18.8738502225228	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCAGAACTCTGCCATGT	NA	False	NA	-31	True	NA	NA	NA	46556965	46549043	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_46550743_46554584_46554696_46555374_46555530_46556932
H1_mix_00011940	chr10	-	1078	2	NNC	ENSG00000165874.13	novel	3544	8	NA	NA	22257	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCTTCTTTTACCCTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	46612888	46610471	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_46611450_46612788
H1_mix_00011942	chr10	-	3245	15	NIC	ENSG00000254929.6	novel	1594	12	NA	NA	-20	15962	combination_of_known_splicesites	FALSE	canonical	2	7	junction_8	44.9568954553091	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATTGCCCAAGTCACACA	NA	False	NA	NA	False	NA	NA	NA	47553534	47501853	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_47503544_47504188_47504241_47507547_47507584_47510170_47510272_47517822_47517858_47520498_47520568_47522865_47522935_47523303_47523492_47542166_47542307_47544388_47544530_47545431_47545621_47549304_47549385_47550657_47550848_47551743_47551953_47553478
H1_mix_00011944	chr10	-	6015	8	FSM	ENSG00000165633.13	ENST00000332853.9	6414	8	12	387	-1	-387	multi-exon	FALSE	canonical	0	0	junction_3	3.4166459266004	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGGAAAAAAAAAACATTCCC	7	True	NA	NA	False	TTTAAA	-17	NA	49115510	49014622	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_49019776_49046982_49047045_49048477_49048585_49064702_49064737_49077218_49077327_49085954_49086024_49107593_49107996_49115430
H1_mix_00011949	chr10	-	2661	5	ISM	ENSG00000188611.17	ENST00000474434.2	555	6	752	-2177	752	-373	3prime_fragment	FALSE	canonical	3	8	junction_4	61.4857707116045	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAATATCATGAAGTAA	NA	False	NA	NA	False	AATAAA	-44	NA	50198394	50185233	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_-_50187505_50189498_50189588_50192652_50192713_50196772_50196920_50198300
H1_mix_00011950	chr10	-	285	1	FSM	ENSG00000213667.3	ENST00000455321.1	1023	1	-29	767	-29	-767	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCACATTGCAATGACCT	NA	False	NA	NA	False	NA	NA	NA	50727998	50727713	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_50727700_50728000
H1_mix_00011951	chr10	-	3556	2	NIC	ENSG00000289527.1	novel	831	3	NA	NA	-9	2	intron_retention	FALSE	canonical	3	44	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGGTGGTCTGTTCAC	11	False	NA	1	True	AATAAA	-24	NA	52039205	52033790	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_52037106_52038964
H1_mix_00011952	chr10	-	3328	14	FSM	ENSG00000148541.13	ENST00000618804.5	3328	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	2.74131225864699	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTATGTTGAAACACAG	2	True	NA	-12	True	AATAAA	-17	NA	59362549	59246132	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_59247738_59251574_59251677_59252798_59252999_59254347_59254444_59262433_59262646_59264084_59264167_59268552_59268692_59269898_59270110_59283362_59283448_59302800_59302865_59323987_59324107_59352269_59352475_59355886_59355944_59362398
H1_mix_00011954	chr10	-	3971	7	NNC	ENSG00000165449.12	novel	3946	6	NA	NA	0	7718	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	50.0166638898144	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTCTTCCAAAAGAGAAGA	21	True	NA	NA	False	NA	NA	NA	59709850	59643045	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_59643072_59650764_59652951_59653674_59654590_59664226_59664323_59672769_59672914_59684095_59684328_59709478
H1_mix_00011955	chr10	-	1984	4	ISM	ENSG00000151150.22	ENST00000373820.5	2358	11	23256	-467	0	0	3prime_fragment	FALSE	canonical	3	98	junction_3	4.49691252107735	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCTCTACAGTCTCCT	NA	False	NA	-6	True	AATAAA	-22	NA	60059430	60028400	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_-_60029827_60042671_60042760_60055657_60056037_60059339
H1_mix_00011958	chr10	-	2896	13	NIC	ENSG00000182010.11	novel	6886	12	NA	NA	20	11	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	76.6838296006545	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATGTGTACATGTATA	157	False	NA	NA	False	AATAAA	-39	NA	62268687	62183023	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_62184388_62198282_62198444_62199753_62199862_62204856_62205023_62217117_62217250_62218194_62218302_62223237_62223333_62236065_62236264_62239647_62239766_62241141_62241196_62245998_62246058_62262624_62262822_62268550
H1_mix_00011959	chr10	-	8671	27	NNC	ENSG00000171988.20	novel	8758	26	NA	NA	-255	53596	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	89.1596533583563	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGAGAGAAATGGACCA	-20	True	NA	NA	False	NA	NA	NA	63522105	63113624	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_63113653_63167224_63168135_63168434_63168567_63176296_63176474_63177716_63177857_63183446_63183570_63184607_63184739_63185562_63185654_63186214_63186384_63189167_63189447_63190893_63191109_63192937_63193152_63193344_63193473_63194285_63194376_63197410_63197564_63198512_63198728_63200475_63200678_63206594_63208802_63209062_63209236_63213472_63215152_63215262_63215456_63215552_63215697_63217206_63217332_63219877_63219984_63264650_63264765_63380317_63380483_63521737
H1_mix_00011960	chr10	-	8607	25	NIC	ENSG00000171988.20	novel	8149	25	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_21	80.3934336041611	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACTTTTTCCAGAGTACT	8	True	NA	-10	True	ATTAAA	-17	NA	63269238	63167224	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_63168135_63168434_63168567_63176296_63176474_63177716_63177857_63183446_63183570_63184607_63184739_63185562_63185654_63186214_63186384_63189167_63189447_63190893_63191109_63192937_63193152_63193344_63193473_63194285_63194376_63197410_63197564_63198512_63198728_63200475_63200678_63206594_63208802_63209062_63209236_63213472_63215152_63215262_63215456_63215552_63215618_63217206_63217332_63219877_63219984_63264650_63264765_63268662
H1_mix_00011961	chr10	-	305	1	FSM	ENSG00000227173.1	ENST00000436904.1	432	1	283	-156	283	156	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTGCCCCCCCATCTA	NA	False	NA	NA	False	AATAAA	-6	NA	65169586	65169281	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_65169300_65169600
H1_mix_00011964	chr10	-	538	4	FSM	ENSG00000122912.15	ENST00000491102.2	538	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	16.0831174424198	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTGCAATCCAGTTTAT	4	True	NA	NA	False	TATAAA	-34	NA	68527416	68506626	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_68506719_68516750_68516844_68517083_68517266_68527245
H1_mix_00011965	chr10	-	985	2	Intergenic	novelGene_200	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	0	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACTGAATGAGGTAATGT	NA	False	NA	-7	True	AATAAA	-19	NA	69801757	69799863	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr10_-_69800137_69801045
H1_mix_00011967	chr10	-	1047	2	NIC	ENSG00000156521.14	novel	3397	2	NA	NA	0	-1236	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATTGAAAAACCTCTGTAT	9	True	NA	-29	True	AATAAA	-7	NA	70146656	70139218	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_70140142_70146532
H1_mix_00011969	chr10	-	2924	9	NNC	ENSG00000148719.16	novel	2935	9	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	46.3477008599132	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGTTAATATATGTTTA	2	True	NA	-33	True	NA	NA	NA	72354914	72332862	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_72334618_72335785_72335932_72336523_72336697_72338201_72338312_72340788_72340869_72340984_72341171_72343365_72343512_72344949_72345128_72354764
H1_mix_00011971	chr10	-	1062	4	FSM	ENSG00000138308.6	ENST00000373032.4	1564	4	82	420	82	-420	multi-exon	FALSE	canonical	0	0	junction_1	0.816496580927726	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGGAAAGAGATGAATGAA	116	False	NA	NA	False	AATAAA	-18	NA	72954724	72935181	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_72935739_72941168_72941335_72942651_72942741_72954474
H1_mix_00011972	chr10	-	851	1	FSM	ENSG00000272599.2	ENST00000608444.1	833	1	0	-18	0	18	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGCATGTCTTTAGGAGA	NA	False	NA	NA	False	ATTAAA	-36	NA	73125405	73124554	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_73124600_73125400
H1_mix_00011974	chr10	-	6326	23	NIC	ENSG00000166348.20	novel	6792	24	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_21	26.1005683735333	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGTCATTCTTCCCTT	8655	False	NA	-13	True	AATAAA	-23	NA	73626044	73497537	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_73499189_73500654_73500839_73504849_73504991_73505307_73505427_73516374_73517748_73519796_73519993_73520907_73521028_73523582_73523751_73526646_73526781_73529679_73529912_73530142_73530524_73530703_73530836_73536268_73536438_73539443_73539594_73541374_73541522_73541632_73541739_73542802_73542886_73543017_73543132_73545537_73545673_73571420_73571514_73575511_73575676_73576135_73576362_73625936
H1_mix_00011975	chr10	-	1268	6	Fusion	ENSG00000166317.12_ENSG00000177791.12	novel	1300	6	NA	NA	3619	-39	multi-exon	FALSE	canonical	3	11	junction_5	9.09065454189081	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTCCTTTGATATTTGA	8681	False	NA	-7	True	AATAAA	-20	NA	73647410	73631650	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr10_-_73632162_73633899_73634066_73634483_73634734_73637743_73637923_73639944_73640036_73647339
H1_mix_00011976	chr10	-	2396	20	NNC	ENSG00000242288.9	novel	3810	19	NA	NA	-7	-1600	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	23.0222101602956	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGAAAGGGAGTCACCC	19	True	NA	NA	False	NA	NA	NA	73730473	73675894	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_73676075_73676718_73676771_73680070_73680107_73682693_73682795_73692042_73692078_73694735_73694805_73697094_73697164_73697532_73697721_73704985_73705079_73713203_73713333_73718014_73718166_73719159_73719300_73720537_73720660_73721361_73721505_73722388_73722578_73724774_73724839_73725960_73726041_73727292_73727483_73728378_73728588_73730317
H1_mix_00011977	chr10	-	461	2	FSM	ENSG00000166507.19	ENST00000463410.1	461	2	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	0	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTACAAAATAAAGGAGGGAA	4309	False	NA	NA	False	AATAGA	-43	NA	73807524	73806875	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_73807196_73807383
H1_mix_00011978	chr10	-	3661	20	NIC	ENSG00000148660.21	novel	3818	21	NA	NA	0	-1	intron_retention	FALSE	canonical	3	14	junction_6	17.9205695892857	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTGTGTTACTGCTGTTG	-9	True	NA	-2	True	AATAAA	-17	NA	73874591	73812501	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_73814506_73815002_73815248_73817022_73817118_73817478_73817555_73821681_73821731_73824039_73824085_73825320_73825348_73837467_73837512_73842168_73842212_73842457_73842542_73847224_73847348_73847987_73848083_73848525_73848610_73849012_73849116_73849260_73849334_73852253_73852320_73853191_73853247_73860829_73860890_73872988_73873084_73874396
H1_mix_00011979	chr10	-	3707	20	NNC	ENSG00000148660.21	novel	3818	21	NA	NA	-28	-1	intron_retention	FALSE	canonical	1	3	junction_19	20.5919329066269	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTGTGTTACTGCTGTTG	NA	False	NA	-2	True	AATAAA	-17	NA	73874619	73812501	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_73814506_73815002_73815248_73817022_73817118_73817478_73817555_73821681_73821731_73824039_73824085_73825278_73825348_73837467_73837512_73842168_73842212_73842457_73842542_73847224_73847348_73847987_73848083_73848525_73848610_73849012_73849116_73849260_73849334_73852253_73852320_73853191_73853247_73860829_73860890_73872988_73873060_73874396
H1_mix_00011982	chr10	-	5550	26	ISM	ENSG00000156113.24	ENST00000286627.10	6194	27	233877	8	0	1	3prime_fragment	FALSE	canonical	2	8	junction_19	5.42822254517996	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTATTGGTTTGTTTA	NA	False	NA	0	True	ATTAAA	-23	NA	77404025	76884876	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_-_76887516_76889450_76889570_76891524_76891720_76909965_76910097_76914935_76915050_76944772_76944966_76949141_76949367_76953800_76953925_76969973_76970068_77011966_77012044_77019012_77019100_77027822_77027892_77039527_77039638_77073096_77073253_77079480_77079551_77084636_77084720_77086487_77086594_77090399_77090511_77108480_77108573_77110172_77110344_77112366_77112443_77120972_77121049_77183420_77183533_77184822_77184917_77251194_77251257_77403861
H1_mix_00011983	chr10	-	1996	17	NIC	ENSG00000156113.24	novel	2808	9	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	7.33889467154285	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTCCGTCTGCAAATG	NA	False	NA	NA	False	AATAAA	-14	NA	77404025	77012200	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_77012558_77019012_77019100_77027822_77027892_77039527_77039638_77073096_77073253_77079480_77079551_77084636_77084720_77086487_77086594_77090399_77090511_77108480_77108573_77110172_77110344_77112366_77112443_77120972_77121049_77183420_77183533_77184822_77184917_77251194_77251257_77403861
H1_mix_00011984	chr10	-	387	5	FSM	ENSG00000156113.24	ENST00000638531.1	599	5	212	0	212	0	multi-exon	FALSE	canonical	3	11	junction_4	3.26917420765551	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGAGCTGGAATTGGAAAG	288	False	NA	NA	False	NA	NA	NA	77090510	77073235	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_77073253_77079480_77079551_77084636_77084720_77086487_77086594_77090399
H1_mix_00011985	chr10	-	7206	32	NIC	ENSG00000151208.17	novel	7644	32	NA	NA	509	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	52.3497602529676	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGAAGATGTGAGTTT	858	False	NA	-7	True	AATAAA	-20	NA	77926246	77790786	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_77792544_77794007_77794118_77794848_77794959_77796060_77796189_77796450_77796595_77805664_77805929_77806757_77806929_77807795_77807945_77809546_77809731_77811093_77811235_77811923_77812058_77812214_77812378_77816550_77816702_77817006_77817097_77817776_77817890_77819320_77819466_77819894_77820019_77821081_77822102_77824383_77824477_77828881_77828986_77829354_77829531_77830216_77830345_77830740_77830874_77833913_77834040_77835737_77835923_77841880_77842194_77843446_77843707_77853353_77853538_77854226_77854371_77856729_77856893_77869128_77869198_77926216
H1_mix_00011991	chr10	-	876	6	FSM	ENSG00000223482.9	ENST00000433920.5	876	6	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	104.39042101649	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTCTATTGTTTAAAATT	8	False	NA	-4	True	AATAAA	-18	NA	87342612	87238666	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_87238873_87246114_87246213_87288441_87288496_87326629_87326673_87336785_87336890_87342241
H1_mix_00012000	chr10	-	5686	25	FSM	ENSG00000119912.18	ENST00000677569.1	5685	25	0	-1	0	0	multi-exon	FALSE	canonical	1	1	junction_11	97.3731992416577	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCTTACAGGGATGAAAATA	-31	True	NA	-50	True	NA	NA	NA	92574096	92451935	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_92454540_92455575_92455644_92456358_92456432_92461190_92461253_92463730_92464004_92465675_92465844_92468878_92468991_92470253_92470346_92474840_92474962_92475883_92475995_92478644_92478790_92479276_92479422_92483254_92483338_92487195_92487319_92490492_92490596_92506441_92506523_92507574_92507667_92508112_92508206_92508727_92508891_92510049_92510163_92514919_92515043_92531747_92531918_92534577_92534786_92537365_92537551_92573921
H1_mix_00012001	chr10	-	5467	26	FSM	ENSG00000119912.18	ENST00000677096.1	5467	26	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_24	81.780525799239	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTCACCTCTGGAGTC	9	True	NA	-16	True	AATAAA	-6	NA	92574056	92452255	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_92454540_92455575_92455644_92456358_92456432_92461190_92461253_92463730_92464004_92465675_92465844_92468878_92468991_92470253_92470346_92474840_92474962_92475883_92475995_92479276_92479422_92483254_92483338_92487195_92487319_92490492_92490596_92504793_92504898_92506441_92506523_92507574_92507667_92508112_92508206_92508727_92508891_92510049_92510163_92514919_92515043_92531747_92531918_92534577_92534786_92537365_92537551_92559033_92559216_92573921
H1_mix_00012020	chr10	-	1280	3	ISM	ENSG00000107521.20	ENST00000465957.1	922	4	1514	-479	0	479	3prime_fragment	FALSE	canonical	3	161	junction_1	146.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAGTGGTTGTGTAATTT	1509	False	NA	-14	True	AATAAA	-14	NA	98445413	98441908	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_-_98442958_98443123_98443241_98445299
H1_mix_00012023	chr10	-	3756	22	NNC	ENSG00000213341.11	novel	3600	21	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	52.6337622175165	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTTGATCTCTATTCAT	0	True	NA	-1	True	ATTAAA	-15	NA	100229584	100188366	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_100189628_100190868_100190969_100192458_100192694_100193297_100193432_100193983_100194132_100194424_100194522_100199970_100200021_100200670_100200781_100202087_100202150_100204505_100204658_100205075_100205200_100207229_100207333_100209594_100209790_100217994_100218131_100218717_100218826_100219007_100219133_100219269_100219360_100220587_100220677_100222111_100222182_100222865_100222981_100225922_100226018_100229427
H1_mix_00012031	chr10	-	4012	25	NIC	ENSG00000120029.13	novel	4099	26	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_11	29.223159575165	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTGTTGCTTTTTTTTT	-32	True	NA	-3	True	ATTAAA	-23	NA	102056188	101845598	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_101847621_101849775_101849893_101889411_101889491_101939862_101939939_101956596_101956724_101957649_101957733_101975211_101975301_101990550_101990612_101991968_101992039_101993537_101993604_101995296_101995356_102006539_102006634_102009373_102009450_102009976_102010024_102011722_102011784_102012832_102012877_102013967_102014025_102023476_102023564_102023674_102023750_102025155_102025249_102029637_102029746_102033025_102033173_102033282_102033340_102040012_102040126_102056084
H1_mix_00012036	chr10	-	954	12	NNC	ENSG00000076685.19	novel	856	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_5	138.090460230284	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGCTTCATGTGTATA	6	True	NA	NA	False	TATAAA	-10	NA	103193272	103097290	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_103097375_103098930_103098985_103099925_103100020_103101044_103101103_103101234_103101327_103105357_103105382_103105705_103105802_103106588_103106707_103139405_103139480_103174857_103174983_103181230_103181329_103193235
H1_mix_00012037	chr10	-	1272	3	NNC	ENSG00000076685.19	novel	4688	20	NA	NA	0	27236	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	88	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTCTTTGCTTGGTTAT	17	True	NA	0	True	AATAAA	-22	NA	103193261	103142047	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_103143169_103174857_103174983_103193235
H1_mix_00012046	chr10	-	814	2	ISM	ENSG00000023041.12	ENST00000684617.1	3472	9	41	13661	1	-13561	5prime_fragment	FALSE	canonical	3	202	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTAGGCTCGGAGACTT	10	True	NA	94	True	NA	NA	NA	112446900	112445032	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_-_112445651_112446704
H1_mix_00012052	chr10	-	753	2	FSM	ENSG00000165868.16	ENST00000674400.1	734	2	0	-19	0	19	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGGAGCAAAGGGTTTC	21	True	NA	NA	False	NA	NA	NA	116849670	116847575	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr10_-_116848224_116849565
H1_mix_00012054	chr10	-	6505	6	NNC	ENSG00000165650.12	novel	9672	5	NA	NA	-36	-3178	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	75.9541967240784	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCATCTCTATGGAATTAT	17	False	NA	NA	False	AAAAAG	-8	NA	117375476	117280451	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_117281352_117281376_117285472_117290185_117290349_117318871_117318975_117340979_117341103_117374355
H1_mix_00012064	chr10	-	1033	8	NNC	ENSG00000107669.19	novel	2161	8	NA	NA	66	-2	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	78.8423899243268	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACTCCTCAGAAGCCCCT	572	False	NA	-12	True	AATAAA	-23	NA	121927883	121888999	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_121889157_121898840_121898970_121902390_121902621_121910905_121911152_121913789_121913894_121922348_121922412_121924265_121924330_121927843
H1_mix_00012066	chr10	-	1796	9	ISM	ENSG00000286088.1	ENST00000650744.1	2404	11	33739	-27	9929	9	3prime_fragment	FALSE	canonical	3	22	junction_5	39.0862427843864	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCACTGTGTCGGTGTGTT	6518	False	NA	-11	True	AATAAA	-36	NA	122845844	122832157	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr10_-_122832451_122833671_122833941_122834705_122835098_122836177_122836351_122836830_122836900_122837403_122837555_122839016_122839232_122841177_122841329_122845761
H1_mix_00012068	chr10	-	3087	11	NNC	ENSG00000175029.17	novel	6939	11	NA	NA	6878	940	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_10	238.312735706676	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAATTACCTGTGATAACA	-4	True	NA	NA	False	NA	NA	NA	125151838	124988194	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125110989_125111094_125151617
H1_mix_00012069	chr10	-	2956	10	NIC	ENSG00000175029.17	novel	6939	11	NA	NA	1	940	combination_of_known_junctions	FALSE	canonical	3	172	junction_9	189.323943429128	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAATTACCTGTGATAACA	548	False	NA	NA	False	NA	NA	NA	125160512	124988194	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125160318
H1_mix_00012070	chr10	-	3003	10	NIC	ENSG00000175029.17	novel	6939	11	NA	NA	2	940	combination_of_known_splicesites	FALSE	canonical	3	30	junction_8	284.063764359734	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAATTACCTGTGATAACA	8	True	NA	NA	False	NA	NA	NA	125161024	124988194	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125160318_125160521_125160826
H1_mix_00012077	chr10	-	798	2	NNC	ENSG00000165752.17	novel	607	2	NA	NA	0	726	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTTCTAATTTTCTTTT	4	True	NA	NA	False	AATAAA	-13	NA	132331837	132329554	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr10_-_132329997_132331481
H1_mix_00012084	chr10	+	504	1	Intergenic	novelGene_184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACTGTGAGAGTTACCGG	4013	False	NA	NA	False	NA	NA	NA	6632278	6632782	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr10_+_6632300_6632800
H1_mix_00012085	chr10	+	276	1	Intergenic	novelGene_185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CATCTCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	17114961	17115237	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr10_+_17115000_17115200
H1_mix_00012086	chr10	+	224	1	Intergenic	novelGene_186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCGCTTACTGGATTTGAA	NA	False	NA	NA	False	AGTAAA	-5	NA	17631674	17631898	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr10_+_17631700_17631900
H1_mix_00012087	chr10	+	321	1	Intergenic	novelGene_192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGCAGAGCGAAGGGAGA	NA	False	NA	NA	False	NA	NA	NA	34391053	34391374	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr10_+_34391100_34391400
H1_mix_00012088	chr10	+	4650	1	Intergenic	novelGene_195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACAGCCATGTTGCTC	NA	False	NA	NA	False	NA	NA	NA	54167794	54172444	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr10_+_54167800_54172400
H1_mix_00012090	chr10	+	281	1	Intergenic	novelGene_197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACGTTTTTAGGTACAAAA	NA	False	NA	NA	False	NA	NA	NA	59997516	59997797	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr10_+_59997500_59997800
H1_mix_00012091	chr10	+	808	1	Intergenic	novelGene_199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATTTTTATCTGTGTTCT	6619	False	NA	0	True	AATAAA	-20	NA	68777835	68778643	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr10_+_68777800_68778600
H1_mix_00012092	chr10	+	215	1	Intergenic	novelGene_201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCCCTGACTATTACTG	NA	False	NA	NA	False	ACTAAA	-6	NA	76821142	76821357	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr10_+_76821100_76821400
H1_mix_00012093	chr10	+	469	1	Intergenic	novelGene_204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCCCCAAAAAATTTTTGC	NA	False	NA	NA	False	NA	NA	NA	76822746	76823215	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr10_+_76822700_76823200
H1_mix_00012098	chr11	+	3506	10	FSM	ENSG00000177963.15	ENST00000526104.6	3506	10	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_7	38.3679392909249	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATGTGTAAATTATCAAA	3	True	NA	13	True	AATAAA	-20	NA	207707	215113	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_208939_209270_209319_209406_210001_210570_210663_211198_211350_212415_212512_212614_212760_212836_212982_213298_213419_214229
H1_mix_00012101	chr11	+	2565	8	FSM	ENSG00000177963.15	ENST00000527696.5	2565	8	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_5	38.5401989976117	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATGTGTAAATTATCAAA	234	False	NA	13	True	AATAAA	-20	NA	209068	215113	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_210001_210570_210663_211198_211350_212415_212512_212614_212760_212836_212982_213298_213419_214229
H1_mix_00012106	chr11	+	1608	13	FSM	ENSG00000185627.19	ENST00000532097.6	1589	13	-19	0	-9	0	multi-exon	FALSE	canonical	3	871	junction_3	93.0164262673833	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGCTCTGTTTTCTTG	255	False	NA	25	True	AATAAA	-19	NA	236956	252984	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_237145_238997_239077_244040_244076_244160_244217_244425_244470_244674_244762_247276_247449_248775_248856_248931_249058_250802_250866_251545_251627_251819_251937_252504
H1_mix_00012107	chr11	+	1427	12	FSM	ENSG00000185627.19	ENST00000352303.9	1427	12	0	0	0	0	multi-exon	FALSE	canonical	1	18	junction_10	295.807481507318	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTATAATAAACCCCTCT	1	True	NA	-6	True	NA	NA	NA	237025	252953	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_237145_238997_239077_244040_244076_244160_244217_244425_244470_244674_244762_247276_247449_248775_248856_248931_249058_250802_250866_251819_251937_252504
H1_mix_00012108	chr11	+	1501	12	FSM	ENSG00000185627.19	ENST00000382671.8	1489	12	-12	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	294.458601111591	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGTGGCTCTGTTTTC	1	True	NA	22	True	AATAAA	-16	NA	237025	252981	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_237145_238997_239077_244160_244217_244425_244470_244674_244762_247276_247449_248775_248856_248931_249058_250802_250866_251545_251627_251819_251937_252504
H1_mix_00012109	chr11	+	2200	1	FSM	ENSG00000185627.19	ENST00000527982.1	2200	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGCTCTGTTTTCTT	NA	False	NA	24	True	AATAAA	-18	NA	250783	252983	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_250800_253000
H1_mix_00012110	chr11	+	812	2	FSM	ENSG00000255026.1	ENST00000534742.1	812	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGCGGGGACCGAGGGGA	26	False	NA	NA	False	NA	NA	NA	288037	288987	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_288812_288949
H1_mix_00012111	chr11	+	3723	14	FSM	ENSG00000142102.16	ENST00000409548.7	3699	14	-24	0	-24	0	multi-exon	FALSE	canonical	3	46	junction_1	84.5989494528195	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGCTGAGACCTGTGGAC	7	False	NA	NA	False	NA	NA	NA	289101	296107	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_289240_289803_290076_290389_290601_290677_291114_291975_292096_292545_292678_292885_292998_293162_293236_293365_293503_293593_293728_293829_293926_294098_294197_294266_294479_294555
H1_mix_00012112	chr11	+	745	3	FSM	ENSG00000142102.16	ENST00000529087.1	745	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	85	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTCCTGACAGCAGTGG	13	False	NA	NA	False	NA	NA	NA	289177	290800	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_289240_289803_290076_290389
H1_mix_00012113	chr11	+	3274	14	NNC	ENSG00000142102.16	novel	3699	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	129	junction_1	73.4494955896013	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGGAGCCGCTGTGCTT	11	True	NA	25	True	ATTAAA	-29	NA	289135	295683	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_289240_289794_290076_290389_290601_290677_291114_291975_292096_292545_292678_292885_292998_293162_293236_293365_293503_293593_293728_293829_293926_294098_294197_294266_294479_294555
H1_mix_00012115	chr11	+	907	2	FSM	ENSG00000185201.18	ENST00000616316.3	1006	2	99	0	99	0	multi-exon	FALSE	canonical	3	1807	junction_1	0	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTGACTTCACCTGG	NA	False	NA	32	True	AATAAA	-18	NA	307914	309395	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_308439_309012
H1_mix_00012116	chr11	+	713	2	FSM	ENSG00000185201.18	ENST00000399817.9	713	2	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGACTTCACCTGGGG	2	True	NA	34	True	AATAAA	-20	NA	308105	309397	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_308439_309017
H1_mix_00012117	chr11	+	522	2	FSM	ENSG00000185885.17	ENST00000681761.1	522	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGTATGGCCCTGGCGGA	13	False	NA	NA	False	NA	NA	NA	313526	314356	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_313692_313999
H1_mix_00012118	chr11	+	663	2	FSM	ENSG00000185885.17	ENST00000681938.1	662	2	0	-1	0	0	multi-exon	FALSE	canonical	3	568	junction_1	0	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTGTGACTTCATCTG	11	True	NA	26	True	AATAAA	-17	NA	314039	315272	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_314357_314926
H1_mix_00012119	chr11	+	675	2	FSM	ENSG00000185885.17	ENST00000408968.4	668	2	0	-7	0	7	multi-exon	FALSE	canonical	3	11873	junction_1	0	1475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTTCATCTGGAGTGGG	11	True	NA	33	True	AATAAA	-24	NA	314039	315279	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_314357_314921
H1_mix_00012120	chr11	+	842	3	FSM	ENSG00000185885.17	ENST00000681577.1	835	3	0	-7	0	7	multi-exon	FALSE	canonical	1	2	junction_1	397	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTTCATCTGGAGTGGG	11	True	NA	33	True	AATAAA	-24	NA	314039	315279	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_314357_314642_314810_314921
H1_mix_00012121	chr11	+	3750	20	FSM	ENSG00000182272.12	ENST00000329962.11	3750	20	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	45.9545722935318	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTCCTCTGTGCCTGTTC	-6	True	NA	28	True	AATGAA	-25	NA	369498	382117	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_369955_372108_372213_372661_372755_372851_372948_373025_373117_373190_373292_373448_373517_373749_373829_375460_375528_375638_375774_375846_375957_376073_376175_376250_376352_376420_377328_379417_379702_379865_380020_380129_380203_380291_380446_380824_380952_381668
H1_mix_00012122	chr11	+	409	3	FSM	ENSG00000182272.12	ENST00000530717.1	409	3	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	5.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGCGGCGGGCCGTGCAG	291	False	NA	NA	False	GGGGCT	-8	NA	369795	372807	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_369955_372108_372213_372661
H1_mix_00012125	chr11	+	2725	14	NIC	ENSG00000184363.10	novel	2817	13	NA	NA	11	0	intron_retention	TRUE	canonical	3	44	junction_1	57.0770267467439	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCCTGTGTCCTTCCATG	716	False	NA	9	True	AATAAA	-19	NA	394155	404908	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_394184_394328_394525_396607_396688_396813_397446_397538_397663_398991_399197_399966_400142_400333_400452_400534_400706_403077_403264_403617_403772_403942_404136_404235_404324_404533
H1_mix_00012126	chr11	+	2817	13	FSM	ENSG00000184363.10	ENST00000331563.7	2817	13	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_4	22.1514672200286	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCCTGTGTCCTTCCATG	-19	True	NA	9	True	AATAAA	-19	NA	394208	404908	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_394525_396607_396688_396813_397446_397538_397663_398991_399197_399966_400142_400333_400452_400534_400706_403077_403264_403617_403772_403942_404136_404235_404324_404533
H1_mix_00012127	chr11	+	590	2	FSM	ENSG00000184363.10	ENST00000533069.1	590	2	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGCAGCGCCTTTGGGGC	15	True	NA	NA	False	NA	NA	NA	394242	396915	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_394525_396607
H1_mix_00012128	chr11	+	2476	12	FSM	ENSG00000174915.12	ENST00000308020.6	2458	12	-18	0	-18	0	multi-exon	FALSE	canonical	3	236	junction_10	15.3289010242604	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCCCGTGTCCTGCTTTG	-34	True	NA	39	True	AATAAA	-39	NA	450260	491399	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_450638_460186_460289_473894_473978_479084_479153_486938_487074_487419_487471_488198_488313_488528_488648_489399_489515_489587_489734_489882_490069_490419
H1_mix_00012129	chr11	+	757	5	ISM	ENSG00000161328.11	ENST00000270115.8	2765	14	14224	612	14224	-612	3prime_fragment	FALSE	canonical	3	7	junction_1	2.58602010819715	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGCTGGGGCCACGACTT	NA	False	NA	NA	False	AATATA	-21	NA	551750	554300	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_551828_551902_551968_552089_552233_552568_552703_553962
H1_mix_00012130	chr11	+	2210	2	FSM	ENSG00000254815.6	ENST00000527620.5	2210	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTCACCCTTCATCTCT	1924	False	NA	20	True	ATTAAA	-14	NA	557594	560106	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_559477_559778
H1_mix_00012131	chr11	+	1681	4	FSM	ENSG00000099849.15	ENST00000414138.6	1679	4	-2	0	-1	0	multi-exon	FALSE	canonical	1	3	junction_2	192.461828827317	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACCCCAACGTGAAAACCT	-34	True	NA	-18	True	NA	NA	NA	560968	563980	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_561034_561761_561893_562083_562777_563188
H1_mix_00012132	chr11	+	1718	4	FSM	ENSG00000099849.15	ENST00000397582.7	1731	4	13	0	-1	0	multi-exon	FALSE	canonical	3	340	junction_1	65.6370491584	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGCAGCTTGAGTGTGTG	-34	True	NA	14	True	AATAAA	-6	NA	560968	564012	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_561034_561761_561893_562078_562777_563188
H1_mix_00012133	chr11	+	1741	6	NIC	ENSG00000099849.15	novel	2017	6	NA	NA	-1	167	combination_of_known_junctions	FALSE	canonical	3	63	junction_4	184.67116721351	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACATTCCATCTGCTCTG	-34	True	NA	NA	False	GGGGCT	-9	NA	560968	564192	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_561034_561761_561893_562078_562777_563188_563318_563395_563479_563557
H1_mix_00012134	chr11	+	5719	18	NIC	ENSG00000070047.13	novel	5539	18	NA	NA	-368	0	combination_of_known_splicesites	TRUE	canonical	3	24	junction_2	62.082710763775	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTATCTTTAGAAACCT	4360	False	NA	52	True	NA	NA	NA	576101	612043	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_576593_581491_581598_581961_582082_587258_587465_591383_591468_592558_592675_596922_597021_597394_597571_598372_598503_601573_601702_605118_605301_605604_605725_606441_606597_607065_609721_610195_610348_610500_610762_610953_611083_611633
H1_mix_00012135	chr11	+	5631	19	NNC	ENSG00000070047.13	novel	5539	18	NA	NA	-368	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	79.3845345201926	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTATCTTTAGAAACCT	4360	False	NA	52	True	NA	NA	NA	576101	612043	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_576329_576422_576593_581491_581607_581964_582082_587258_587465_591383_591468_592558_592675_596922_597021_597394_597571_598372_598503_601573_601702_605118_605301_605604_605725_606441_606597_607065_609721_610195_610348_610500_610762_610953_611083_611633
H1_mix_00012136	chr11	+	5278	18	FSM	ENSG00000070047.13	ENST00000416188.3	5278	18	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_11	62.4821081657017	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTGCTCACAGTTGAAA	-6	True	NA	-27	True	NA	NA	NA	576469	611964	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_576593_581491_581607_581961_582082_587258_587465_591383_591468_592558_592675_596922_597021_597394_597571_598372_598503_601573_601702_605118_605301_605607_605725_606441_606597_607065_609721_610195_610348_610500_610762_610953_611083_611633
H1_mix_00012138	chr11	+	5539	18	FSM	ENSG00000070047.13	ENST00000264555.10	5539	18	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_2	39.4010520998411	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTTGTGCTCTTGTAAA	-6	True	NA	11	True	NA	NA	NA	576469	612222	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_576593_581491_581607_581961_582082_587258_587465_591383_591468_592558_592675_596922_597021_597394_597571_598372_598503_601573_601702_605118_605301_605604_605725_606441_606597_607065_609721_610195_610348_610500_610762_610953_611083_611633
H1_mix_00012142	chr11	+	1405	4	FSM	ENSG00000069696.7	ENST00000176183.6	1399	4	-6	0	-6	0	multi-exon	FALSE	canonical	3	49	junction_2	1.88561808316413	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCTGTGAAGGCTCCTG	-14	True	NA	12	True	ATTAAA	-17	NA	637262	640706	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_637590_639432_639546_639647_640307_640400
H1_mix_00012143	chr11	+	1017	6	NIC	ENSG00000177042.16	novel	1047	6	NA	NA	-28	2	combination_of_known_junctions	FALSE	canonical	3	59	junction_5	23.7436307248913	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAATTCTCCTAATTATG	164	False	NA	16	True	AATAAA	-17	NA	695562	704123	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_695847_698868_698889_700141_700236_700614_700708_702944_703147_703799
H1_mix_00012144	chr11	+	3907	4	FSM	ENSG00000177042.16	ENST00000488769.2	669	4	-242	-2996	-28	2	multi-exon	FALSE	canonical	3	68	junction_1	23.2713462342761	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAATTCTCCTAATTATG	164	False	NA	16	True	AATAAA	-17	NA	695562	704123	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_695847_698868_698889_700141_700236_700614
H1_mix_00012145	chr11	+	1571	5	FSM	ENSG00000177042.16	ENST00000397512.8	1572	5	0	1	0	-1	multi-exon	FALSE	canonical	2	2	junction_1	46.8881648180007	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTCCTAATTATGGCCAC	-5	True	NA	21	True	AATAAA	-22	NA	695642	704128	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_695823_698868_698889_700141_700236_700614_700708_702944
H1_mix_00012146	chr11	+	1434	5	FSM	ENSG00000177042.16	ENST00000397510.9	1423	5	-11	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	20.2051973511767	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCCTAATTATGGCCACC	-3	True	NA	22	True	AATAAA	-23	NA	695804	704129	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_695847_698868_698889_700141_700236_700614_700708_702944
H1_mix_00012147	chr11	+	2672	4	ISM	ENSG00000177042.16	ENST00000492023.1	2047	5	12	-2	-2	2	intron_retention	FALSE	canonical	3	68	junction_1	23.3285709425636	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAATTCTCCTAATTATG	6	True	NA	16	True	AATAAA	-17	NA	695813	704123	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_695847_698868_700236_700614_700708_702944
H1_mix_00012148	chr11	+	3188	21	FSM	ENSG00000177106.17	ENST00000614442.4	3188	21	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	61.7684992532602	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGTGTGTCTCAGTTCTC	909	False	NA	19	True	ATTAAA	-19	NA	706119	727726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_706289_709329_709452_709552_709609_710421_710487_720061_720224_720548_720747_720829_720910_721063_721207_721284_721353_721564_721692_721902_721992_722090_722166_722400_722550_722672_722806_723240_723354_724723_724830_725727_725848_726097_726171_726303_726485_726618_726752_726900
H1_mix_00012149	chr11	+	551	4	FSM	ENSG00000177106.17	ENST00000529680.5	551	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	43.9089968002003	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCGTAAGGGGAGAGGCC	-9	True	NA	NA	False	NA	NA	NA	706230	709795	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_706289_706673_706802_709329_709452_709552
H1_mix_00012150	chr11	+	3030	21	FSM	ENSG00000177106.17	ENST00000318562.13	3030	21	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	56.2919843316968	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGTGTCTCAGTTCTCT	-9	True	NA	20	True	ATTAAA	-20	NA	706230	727727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_706289_709329_709452_709552_709609_710421_710487_720061_720224_720596_720747_720829_720910_721063_721207_721284_721353_721564_721692_721902_721992_722090_722166_722400_722550_722672_722806_723240_723354_724723_724830_725727_725848_726097_726171_726303_726485_726618_726752_726900
H1_mix_00012152	chr11	+	2304	9	FSM	ENSG00000177106.17	ENST00000531393.5	2304	9	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	67.2122338194469	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGAGCCGTGTGTCTCAG	1275	False	NA	14	True	ATTAAA	-14	NA	721925	727721	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_722550_722672_722806_723240_723354_724723_724830_725727_725848_726097_726171_726303_726485_726618_726752_726900
H1_mix_00012153	chr11	+	1597	6	FSM	ENSG00000177106.17	ENST00000527832.5	1597	6	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	61.5740204956603	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGCCGTGTGTCTCAGT	3	True	NA	15	True	ATTAAA	-15	NA	724561	727722	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_724830_725727_725848_726097_726171_726303_726485_726618_726752_726900
H1_mix_00012154	chr11	+	1400	4	ISM	ENSG00000177106.17	ENST00000527832.5	1597	6	1315	30	-204	0	3prime_fragment	FALSE	canonical	3	241	junction_2	9.93310961716756	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCTAAGCAATTAAACCAG	92	False	NA	-15	True	NA	NA	NA	725876	727692	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_726171_726303_726485_726618_726752_726900
H1_mix_00012155	chr11	+	750	3	FSM	ENSG00000177106.17	ENST00000534679.1	750	3	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_1	11	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTGGAGGCACAACGCC	296	False	NA	68	True	NA	NA	NA	726080	727113	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_726485_726618_726752_726900
H1_mix_00012156	chr11	+	1621	8	FSM	ENSG00000177156.11	ENST00000528097.5	1231	8	-40	-350	-27	350	multi-exon	FALSE	canonical	0	0	junction_6	712.943939748764	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTTCCCTGTCAAGGC	593	False	NA	NA	False	NA	NA	NA	747387	765362	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_747579_755878_756003_758949_759058_760121_760254_763343_763520_763746_763941_764287_764434_764812
H1_mix_00012158	chr11	+	1209	8	FSM	ENSG00000177156.11	ENST00000319006.8	1199	8	-10	0	0	0	multi-exon	FALSE	canonical	3	1917	junction_3	102.156742312977	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGTTTCATTCACTGT	7	True	NA	21	True	ATTAAA	-15	NA	747453	765012	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_747579_755878_756003_758949_759058_760121_760254_763343_763520_763746_763945_764287_764434_764812
H1_mix_00012160	chr11	+	721	2	FSM	ENSG00000255284.3	ENST00000655766.1	717	2	-4	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACCAGCCTGGCCAAGAT	-12	True	NA	NA	False	NA	NA	NA	777577	778715	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_777696_778112
H1_mix_00012161	chr11	+	914	2	FSM	ENSG00000255284.3	ENST00000530083.2	891	2	-24	1	-24	0	multi-exon	FALSE	canonical	3	15	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAACCGGCTGTGGTGGCG	6462	False	NA	NA	False	AATACA	-15	NA	777549	784297	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_777696_783529
H1_mix_00012162	chr11	+	610	4	FSM	ENSG00000255284.3	ENST00000525941.1	610	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	6.68331255192114	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAACCGGCTGTGGTGGCG	18	True	NA	NA	False	AATACA	-15	NA	777607	784297	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_777696_778112_778219_783529_783672_784023
H1_mix_00012163	chr11	+	2766	1	FSM	ENSG00000288675.1	ENST00000678030.1	1680	1	-1088	2	-1088	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACAGTGCAGTTTTGTTG	8446	False	NA	NA	False	AATAAA	-19	NA	796422	799188	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_796400_799200
H1_mix_00012164	chr11	+	461	5	NNC	ENSG00000177600.9	novel	462	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	3595.93298046557	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCTCAAGTATTCCATGA	-3	True	NA	25	True	AATAAA	-13	NA	809966	812871	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_810044_810233_810358_811596_811646_812534_812634_812759
H1_mix_00012165	chr11	+	458	5	NNC	ENSG00000177600.9	novel	462	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	4331.49327599617	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCTCAAGTATTCCATGA	-3	True	NA	25	True	AATAAA	-13	NA	809966	812871	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_810044_810233_810358_811596_811646_812534_812634_812762
H1_mix_00012166	chr11	+	654	4	FSM	ENSG00000177600.9	ENST00000530797.5	637	4	-17	0	0	0	multi-exon	FALSE	canonical	3	6779	junction_3	930.305087353367	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAAGTATTCCATGAGCA	-3	True	NA	28	True	AATAAA	-16	NA	809966	812874	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_810358_811596_811646_812534_812634_812759
H1_mix_00012167	chr11	+	462	5	FSM	ENSG00000177600.9	ENST00000321153.9	462	5	0	0	0	0	multi-exon	FALSE	canonical	3	5928	junction_1	1236.54283690457	2767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGTATTCCATGAGCACT	-3	True	NA	30	True	AATAAA	-18	NA	809966	812876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_810040_810233_810358_811596_811646_812534_812634_812759
H1_mix_00012169	chr11	+	490	3	FSM	ENSG00000177600.9	ENST00000525722.1	489	3	0	-1	0	0	multi-exon	FALSE	canonical	3	6779	junction_2	999	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGTATTCCATGAGCACT	1067	False	NA	30	True	AATAAA	-18	NA	811371	812876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_811646_812534_812634_812759
H1_mix_00012170	chr11	+	2032	9	ISM	ENSG00000177666.17	ENST00000336615.9	2416	10	644	355	644	0	3prime_fragment	FALSE	canonical	3	133	junction_5	12.6682427747498	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGCCCACTTTGTGTGT	642	False	NA	18	True	AATAAA	-14	NA	819557	825218	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_819906_821627_821861_821957_822024_822396_822607_823526_823588_823693_823856_823997_824131_824313_824437_824522
H1_mix_00012171	chr11	+	2225	8	ISM	ENSG00000177666.17	ENST00000336615.9	2416	10	2173	355	252	0	3prime_fragment	FALSE	canonical	3	133	junction_4	13.4133652506349	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGCCCACTTTGTGTGT	810	False	NA	18	True	AATAAA	-14	NA	821086	825218	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_821861_821957_822024_822396_822607_823526_823588_823693_823856_823997_824131_824313_824437_824522
H1_mix_00012172	chr11	+	637	2	FSM	ENSG00000177666.17	ENST00000531923.1	637	2	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCAGCGGAACGGTGCG	31	False	NA	NA	False	NA	NA	NA	822015	823572	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_822607_823526
H1_mix_00012173	chr11	+	1301	4	FSM	ENSG00000177666.17	ENST00000529255.1	1301	4	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	14.2672897060218	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGCCCACTTTGTGTGT	1063	False	NA	18	True	AATAAA	-14	NA	823542	825218	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_823588_823693_824131_824313_824437_824522
H1_mix_00012174	chr11	+	2311	8	NIC	ENSG00000177685.17	novel	1663	8	NA	NA	-129	0	intron_retention	FALSE	canonical	3	25	junction_1	84.4103195161369	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCGTCCTCCTGGGCCTT	960	False	NA	13	True	AATAAA	-14	NA	827118	831985	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_827460_828229_828773_828851_828964_829359_829541_829985_830133_830249_830714_831223_831296_831534
H1_mix_00012175	chr11	+	2965	9	FSM	ENSG00000177685.17	ENST00000525077.2	2166	9	-800	1	-129	0	multi-exon	FALSE	canonical	3	54	junction_2	80.4394181977965	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCGTCCTCCTGGGCCTT	960	False	NA	13	True	AATAAA	-14	NA	827118	831985	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_828773_828851_828964_829359_829541_829985_830133_830249_830338_830620_830714_830865_831033_831223_831296_831534
H1_mix_00012176	chr11	+	2450	2	FSM	ENSG00000177685.17	ENST00000528694.1	2440	2	-10	0	0	0	multi-exon	FALSE	canonical	3	297	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCGTCCTCCTGGGCCTT	-6	True	NA	13	True	AATAAA	-14	NA	829296	831985	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_831296_831534
H1_mix_00012177	chr11	+	1728	5	FSM	ENSG00000177685.17	ENST00000527763.5	1728	5	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	96.2870058730668	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCGTCCTCCTGGGCCTT	2	True	NA	13	True	AATAAA	-14	NA	829304	831985	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_829541_829985_830133_830249_830714_830865_831296_831534
H1_mix_00012179	chr11	+	1832	9	FSM	ENSG00000177697.19	ENST00000322008.9	1545	9	-288	1	-223	0	multi-exon	TRUE	canonical	3	34	junction_1	165.91521743047	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAGCTCGCTGTGCTGGTA	1442	False	NA	27	True	AATAAA	-19	NA	832663	838834	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_833023_834529_834592_836062_836154_836250_836443_836768_836844_837249_837355_837459_837619_837941_838029_838132
H1_mix_00012180	chr11	+	1545	9	FSM	ENSG00000177697.19	ENST00000397420.9	1545	9	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_1	121.901343306791	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACGAGCTCGCTGTGCTG	-18	True	NA	24	True	AATAAA	-16	NA	832951	838831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_833027_834529_834592_836062_836154_836250_836443_836768_836844_837249_837355_837459_837619_837941_838029_838132
H1_mix_00012181	chr11	+	1486	8	FSM	ENSG00000177697.19	ENST00000397421.5	1486	8	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	124.479979539372	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAGCTCGCTGTGCTGGTA	-18	True	NA	27	True	AATAAA	-19	NA	832951	838834	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_833027_836062_836154_836250_836443_836768_836844_837249_837355_837459_837619_837941_838029_838132
H1_mix_00012183	chr11	+	1841	8	FSM	ENSG00000177697.19	ENST00000532045.6	1835	8	-6	0	0	0	multi-exon	FALSE	canonical	3	187	junction_1	127.322826079287	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCTCGCTGTGCTGGTAA	16	True	NA	28	True	AATAAA	-20	NA	832985	838835	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_833027_834529_834592_836062_836154_836250_836844_837249_837355_837459_837619_837941_838029_838132
H1_mix_00012185	chr11	+	1379	9	FSM	ENSG00000214063.12	ENST00000397397.7	1379	9	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_1	157.932689380635	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGCGTCTATTGCTCGTC	-2	True	NA	14	True	AATAAA	-14	NA	842851	867111	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_842916_847200_847301_850287_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
H1_mix_00012187	chr11	+	1430	9	FSM	ENSG00000214063.12	ENST00000397408.5	1430	9	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	194.614201691449	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTATTGCTCGTCTGCCT	-14	True	NA	19	True	AATAAA	-19	NA	842940	867116	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_843051_847200_847301_850287_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
H1_mix_00012188	chr11	+	1419	9	NNC	ENSG00000214063.12	novel	1430	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_1	198.996859271698	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGCGTCTATTGCTCGTC	-13	True	NA	14	True	AATAAA	-14	NA	842941	867111	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_843046_847200_847301_850287_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
H1_mix_00012189	chr11	+	1672	7	FSM	ENSG00000214063.12	ENST00000527644.2	1687	7	15	0	15	0	multi-exon	FALSE	canonical	3	601	junction_4	29.3522666170018	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGCGTCTATTGCTCGTC	2620	False	NA	14	True	AATAAA	-14	NA	849830	867111	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
H1_mix_00012190	chr11	+	4607	22	FSM	ENSG00000183020.15	ENST00000448903.7	4587	22	-20	0	-20	0	multi-exon	FALSE	canonical	2	111	junction_17	34.0018006726054	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGATCACGCGCTTTCT	-51	True	NA	6	True	AATAAA	-14	NA	925849	1012240	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_926089_959436_959506_970168_970312_972061_972256_977094_977225_981197_981300_984644_984754_985434_985583_986784_986954_988551_988690_992502_992686_993283_993382_993753_993986_994071_994246_1000431_1000599_1003721_1003805_1006527_1006618_1008011_1008136_1009099_1009217_1009327_1009398_1009682_1009818_1010547
H1_mix_00012191	chr11	+	4621	22	FSM	ENSG00000183020.15	ENST00000332231.9	4656	22	30	5	30	0	multi-exon	FALSE	canonical	2	28	junction_7	45.9960069251802	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGATCACGCGCTTTCT	-62	True	NA	6	True	AATAAA	-14	NA	925838	1012240	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_926089_959436_959506_970168_970312_972061_972256_977094_977225_981197_981300_984644_984754_985431_985583_986784_986954_988551_988690_992502_992686_993283_993382_993753_993986_994071_994246_1000431_1000599_1003721_1003805_1006527_1006618_1008011_1008136_1009099_1009217_1009327_1009398_1009682_1009818_1010547
H1_mix_00012192	chr11	+	969	1	FSM	ENSG00000255153.1	ENST00000530897.1	939	1	-30	0	-30	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGGACTGGCCTGGAA	NA	False	NA	4	True	AATAAA	-16	NA	1309738	1310707	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_1309700_1310700
H1_mix_00012193	chr11	+	3294	21	FSM	ENSG00000174672.16	ENST00000529433.5	3211	21	-57	-26	-55	0	multi-exon	FALSE	canonical	3	63	junction_12	12.6920250551281	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTCTTGGTGGTTT	NA	False	NA	7	True	TATAAA	-1	NA	1389843	1461740	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_1390376_1436039_1436135_1438305_1438392_1440787_1440929_1442489_1442607_1443105_1443140_1443334_1443404_1443488_1443636_1444970_1445003_1445293_1445459_1445570_1445669_1445756_1445908_1449775_1449837_1450586_1450795_1451370_1451420_1454484_1454609_1456347_1456529_1456597_1456688_1456954_1457050_1459191_1459240_1460969
H1_mix_00012194	chr11	+	4089	20	FSM	ENSG00000174672.16	ENST00000308219.13	4089	20	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_18	18.8999406409832	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCGACGCAGGTCTTCA	NA	False	NA	6	True	AATAAA	-14	NA	1389898	1462685	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_1390376_1436039_1436135_1438305_1438392_1440787_1440929_1442489_1442607_1443105_1443140_1443334_1443404_1443488_1443636_1444970_1445003_1445293_1445459_1445570_1445669_1445756_1445908_1449775_1449837_1450586_1450795_1451370_1451420_1454484_1454609_1456347_1456529_1456597_1456688_1459191_1459240_1460969
H1_mix_00012195	chr11	+	4506	21	NNC	ENSG00000174672.16	novel	3211	21	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_13	18.377907933168	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACAGCGACGCAGGTCT	6	True	NA	3	True	AATAAA	-11	NA	1389939	1462682	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_1390376_1436039_1436135_1438305_1438392_1440787_1440929_1442489_1442607_1443105_1443140_1443334_1443404_1443488_1443636_1444970_1445003_1445293_1445459_1445570_1445669_1445756_1445908_1449775_1449837_1450220_1450795_1451370_1451420_1454484_1454609_1456347_1456529_1456597_1456688_1456954_1457050_1459191_1459240_1460969
H1_mix_00012197	chr11	+	3769	21	NIC	ENSG00000174672.16	novel	4089	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_19	23.645031190506	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCGACGCAGGTCTTCA	2	True	NA	6	True	AATAAA	-14	NA	1390284	1462685	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_1390376_1436039_1436135_1438305_1438392_1440787_1440929_1442489_1442607_1443105_1443140_1443334_1443404_1443488_1443636_1444970_1445003_1445293_1445459_1445570_1445669_1445756_1445908_1447797_1447864_1449775_1449837_1450586_1450795_1451370_1451420_1454484_1454609_1456347_1456529_1456597_1456688_1459191_1459240_1460969
H1_mix_00012198	chr11	+	641	6	FSM	ENSG00000214026.11	ENST00000381519.5	643	6	2	0	2	0	multi-exon	TRUE	canonical	0	0	junction_5	534.031085237554	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGCTTCCTTCTTCTCT	8696	False	NA	39	True	AATAAA	-29	NA	1947279	1956609	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_1947380_1950898_1951022_1952126_1952210_1952781_1952856_1956255_1956449_1956541
H1_mix_00012199	chr11	+	673	5	FSM	ENSG00000214026.11	ENST00000397298.8	673	5	0	0	0	0	multi-exon	FALSE	canonical	3	1103	junction_1	159.995898384927	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCGGAAGCTCTGCTTCC	-7	True	NA	30	True	AATAAA	-20	NA	1947331	1956600	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_1947380_1950898_1951022_1952126_1952210_1952781_1952856_1956255
H1_mix_00012201	chr11	+	1483	8	FSM	ENSG00000110651.12	ENST00000263645.10	1482	8	-1	0	-1	0	multi-exon	FALSE	canonical	3	1293	junction_1	137.734142018423	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCCTGTGCAGTCCCTC	-4	True	NA	30	True	AATAAA	-22	NA	2377308	2397397	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_2377616_2390411_2390527_2394094_2394193_2394971_2395047_2395415_2395521_2395868_2395971_2396627_2396715_2396803
H1_mix_00012204	chr11	+	933	6	FSM	ENSG00000184281.15	ENST00000380992.5	992	6	59	0	59	0	multi-exon	FALSE	canonical	2	6	junction_1	134.934650849958	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCACTGCCTAGCTGGAA	295	False	NA	NA	False	GGGGCT	-16	NA	2400686	2403701	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_2400799_2401975_2402148_2402293_2402451_2402610_2402653_2402844_2403150_2403556
H1_mix_00012205	chr11	+	3003	3	ISM	ENSG00000184281.15	ENST00000440813.1	851	4	-1533	-427	-61	0	intron_retention	FALSE	canonical	3	40	junction_1	159	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTTGTGTCTATCTGGG	175	False	NA	18	True	AATAAA	-18	NA	2400566	2403875	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_2402148_2402293_2402451_2402610
H1_mix_00012206	chr11	+	2222	3	FSM	ENSG00000184281.15	ENST00000485682.6	979	3	-331	-912	59	0	multi-exon	FALSE	canonical	2	3	junction_1	177.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGTGTCTATCTGGGC	295	False	NA	19	True	AATAAA	-19	NA	2400686	2403876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_2401486_2402293_2402451_2402610
H1_mix_00012207	chr11	+	1465	4	FSM	ENSG00000184281.15	ENST00000380996.9	1544	4	79	0	-61	0	multi-exon	FALSE	canonical	3	39	junction_3	130.742325034992	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTCTATCTGGGCCC	175	False	NA	21	True	AATAAA	-21	NA	2400566	2403878	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_2400799_2402293_2402451_2402610_2402653_2402844
H1_mix_00012208	chr11	+	1472	3	FSM	ENSG00000184281.15	ENST00000333256.11	1472	3	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	67.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGTGTCTATCTGGGC	-2	True	NA	19	True	AATAAA	-19	NA	2400749	2403876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_2400799_2402293_2402451_2402610
H1_mix_00012211	chr11	+	3315	16	FSM	ENSG00000053918.18	ENST00000155840.12	3224	16	-106	15	-106	-15	multi-exon	FALSE	canonical	1	5	junction_11	4.17612260356422	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTGGAATAGGAACGCTA	NA	False	NA	114	True	NA	NA	NA	2444901	2849090	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_2445485_2527927_2528019_2570627_2570755_2571324_2571404_2572012_2572110_2572845_2572987_2583434_2583546_2585211_2585308_2587569_2587693_2588712_2588855_2661960_2662082_2768843_2768920_2775959_2776055_2776985_2777033_2777975_2778038_2847766
H1_mix_00012212	chr11	+	1234	9	FSM	ENSG00000110628.16	ENST00000449793.6	1225	9	-9	0	-4	0	multi-exon	FALSE	canonical	1	2	junction_3	37.7491721763537	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTACTAAATCCCTCCGAC	-31	True	NA	-6	True	AATAAA	-2	NA	2902273	2925227	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_2902365_2903213_2903490_2908232_2908331_2916621_2916741_2917987_2918096_2919306_2919408_2922101_2922204_2922435_2922557_2925009
H1_mix_00012213	chr11	+	1551	11	FSM	ENSG00000110628.16	ENST00000649076.2	1543	11	-14	6	-14	0	multi-exon	TRUE	canonical	3	73	junction_3	18.2032964047724	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGACCTCTTCCGGCCTG	0	True	NA	7	True	AATAAA	-15	NA	2902263	2925240	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_2902365_2903213_2903490_2908232_2908331_2909195_2909357_2909577_2909711_2916621_2916741_2917987_2918096_2919306_2919408_2922101_2922204_2922435_2922557_2925009
H1_mix_00012215	chr11	+	1623	1	FSM	ENSG00000183562.3	ENST00000332881.3	1482	1	-126	-15	-126	15	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATACAAATGTGACCT	NA	False	NA	NA	False	AAAACA	-21	NA	2989736	2991359	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_2989700_2991400
H1_mix_00012216	chr11	+	1653	13	NIC	ENSG00000223756.8	novel	1600	12	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	26	junction_11	33.0028407868171	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCTTGGCTCTGATTTC	0	True	NA	28	True	AATGAA	-22	NA	3380960	3408982	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_3381045_3383461_3383547_3384166_3384285_3384898_3384969_3397116_3397407_3401758_3401868_3402612_3402730_3402914_3402953_3403592_3403653_3404853_3404964_3406498_3406698_3407621_3407698_3408685
H1_mix_00012218	chr11	+	2493	13	NIC	ENSG00000223756.8	novel	1600	12	NA	NA	2	853	combination_of_known_splicesites	FALSE	canonical	3	47	junction_1	27.8388218141501	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCAGCTGCAGTGGGCT	34	False	NA	NA	False	NA	NA	NA	3380994	3409834	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_3381045_3383461_3383547_3384166_3384285_3384898_3384969_3397116_3397407_3401758_3401868_3402612_3402730_3402914_3402957_3403592_3403653_3404853_3404964_3406498_3406716_3407621_3407698_3408685
H1_mix_00012219	chr11	+	392	2	ISM	ENSG00000287312.1	ENST00000656923.1	1173	3	3865	61	3865	-61	3prime_fragment	FALSE	canonical	3	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTCTTGCCTGATGTT	NA	False	NA	2	True	GATAAA	-17	NA	3515423	3520825	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_3515598_3520607
H1_mix_00012220	chr11	+	1616	6	FSM	ENSG00000148985.20	ENST00000396993.8	1566	6	-54	4	29	0	multi-exon	FALSE	canonical	2	7	junction_2	109.779779558897	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTGAAAGGAAAATAAATT	NA	False	NA	-17	True	NA	NA	NA	3797847	3826317	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_3797983_3808293_3808316_3823882_3824136_3824269_3824377_3825019_3825129_3825327
H1_mix_00012221	chr11	+	1743	7	FSM	ENSG00000148985.20	ENST00000396986.6	1837	7	94	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	98.3796501089303	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTTTTTGGGCCAACA	-5	True	NA	0	True	NA	NA	NA	3797912	3826334	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_3797983_3808293_3808316_3811249_3811425_3823882_3824136_3824269_3824377_3825019_3825129_3825327
H1_mix_00012222	chr11	+	1669	6	NIC	ENSG00000148985.20	novel	1530	5	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	108.370475684109	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTGAAAGGAAAATAAATT	483	False	NA	-17	True	NA	NA	NA	3808526	3826317	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_3808652_3822908_3822994_3823882_3824136_3824269_3824377_3825019_3825129_3825327
H1_mix_00012223	chr11	+	1742	6	FSM	ENSG00000148985.20	ENST00000463452.6	931	6	-31	-780	7	0	multi-exon	FALSE	canonical	3	104	junction_1	67.0086561572458	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGGAAAATAAATTTTTT	-20	True	NA	-13	True	NA	NA	NA	3808547	3826321	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_3808652_3811249_3811425_3823882_3824136_3824269_3824377_3825019_3825129_3825327
H1_mix_00012224	chr11	+	1977	7	FSM	ENSG00000148985.20	ENST00000278243.9	1963	7	-19	5	0	-4	multi-exon	FALSE	canonical	1	3	junction_2	99.984582144782	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAGTCTTGGGGCTCATC	-27	True	NA	32	True	AATAAA	-32	NA	3808540	3826366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_3808652_3811249_3811425_3817352_3817536_3823882_3824136_3824269_3824377_3825019_3825129_3825327
H1_mix_00012226	chr11	+	1567	5	FSM	ENSG00000148985.20	ENST00000496834.6	1530	5	-46	9	7	0	multi-exon	FALSE	canonical	3	84	junction_1	74.2710407897991	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGGAAAATAAATTTTTT	-20	True	NA	-13	True	NA	NA	NA	3808547	3826321	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_3808652_3823882_3824136_3824269_3824377_3825019_3825129_3825327
H1_mix_00012228	chr11	+	4188	13	FSM	ENSG00000167323.12	ENST00000526596.2	4168	13	-20	0	-20	0	multi-exon	FALSE	canonical	2	10	junction_10	15.8120470949632	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGGCTTTGACTCTCAT	-25	True	NA	20	True	AATAAA	-22	NA	3855643	4093208	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_3856410_3967551_3967683_4023872_4023988_4055525_4055638_4059280_4059397_4070025_4070204_4074501_4074680_4082183_4082352_4082881_4082983_4083262_4083499_4084672_4084766_4086476_4086544_4091281
H1_mix_00012229	chr11	+	4038	12	FSM	ENSG00000167323.12	ENST00000300737.8	4038	12	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_2	9.17956768099224	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCTTTGACTCTCATT	33	True	NA	21	True	AATAAA	-23	NA	3855701	4093209	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_3856410_3967551_3967683_4023872_4023988_4055525_4055638_4059280_4059397_4070025_4070204_4074501_4074680_4082183_4082352_4082881_4082983_4083262_4083499_4086476_4086544_4091281
H1_mix_00012230	chr11	+	3142	19	FSM	ENSG00000167325.15	ENST00000300738.10	3142	19	0	0	0	0	multi-exon	FALSE	canonical	3	734	junction_15	82.4090407661684	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTCTGTTCTTTGAGAA	2	True	NA	15	True	TATAAA	-19	NA	4094798	4138932	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_4095032_4101992_4102082_4106045_4106224_4107434_4107536_4109643_4109704_4111600_4111641_4111899_4112063_4118319_4118462_4119844_4119929_4121603_4121766_4122140_4122221_4123182_4123385_4126683_4126834_4127034_4127257_4129073_4129151_4132285_4132422_4133562_4133659_4135081_4135271_4138194
H1_mix_00012231	chr11	+	583	4	FSM	ENSG00000167325.15	ENST00000526350.5	583	4	0	0	0	0	multi-exon	FALSE	canonical	3	881	junction_1	65.7081087504088	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCTTTTTTAATAATGCA	2	True	NA	NA	False	AATAAA	-39	NA	4094851	4107570	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_4095032_4101992_4102082_4106045_4106224_4107434
H1_mix_00012235	chr11	+	3427	8	FSM	ENSG00000121236.21	ENST00000380097.8	3422	8	-5	0	-5	0	multi-exon	FALSE	canonical	1	21	junction_1	49.9052162829187	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTCATTTTACTTTTT	-35	True	NA	7	True	AATAAA	-18	NA	5596631	5612952	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_5596915_5603245_5603736_5604533_5604630_5605336_5605568_5608371_5608395_5610144_5610246_5610534_5610562_5610776
H1_mix_00012237	chr11	+	2264	8	FSM	ENSG00000258659.7	ENST00000429814.3	2293	8	29	0	29	0	multi-exon	FALSE	canonical	2	5	junction_1	3.01695886884898	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGAGCTGTAGTAATGTC	21	True	NA	15	True	AATAAA	-26	NA	5625029	5644398	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_5625061_5632254_5632755_5633803_5633900_5634630_5634862_5641166_5641190_5642405_5642507_5642816_5642844_5643143
H1_mix_00012238	chr11	+	2888	8	FSM	ENSG00000132274.16	ENST00000379965.8	2888	8	0	0	0	0	multi-exon	FALSE	canonical	2	84	junction_3	25.9968600929781	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGTCTCATTCTTCAGT	-38	True	NA	13	True	AATAAA	-17	NA	5689789	5710863	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_5689900_5696166_5696656_5697247_5697344_5698314_5698546_5706593_5706617_5708172_5708274_5708576_5708604_5709052
H1_mix_00012239	chr11	+	516	2	Antisense	novelGene_ENSG00000234895.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	546	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAGGAGGATGGGGAGTG	NA	False	NA	NA	False	AATACA	-33	NA	5999760	6075927	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr11_+_5999774_6075424
H1_mix_00012240	chr11	+	413	2	Intergenic	novelGene_222	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGCTTGGCTTGGGCTC	NA	False	NA	NA	False	NA	NA	NA	6069828	6075852	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_6070158_6075768
H1_mix_00012246	chr11	+	2438	6	FSM	ENSG00000166311.10	ENST00000534405.5	2446	6	8	0	6	0	multi-exon	TRUE	canonical	0	0	junction_2	5.45527267879434	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAGACCCCTGTGTGACT	14	True	NA	3	True	AATAAA	-16	NA	6390480	6394991	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_6390917_6391383_6392197_6393215_6393388_6393616_6393694_6393895_6394042_6394197
H1_mix_00012248	chr11	+	2809	3	FSM	ENSG00000132286.12	ENST00000254616.11	2788	3	-21	0	-21	0	multi-exon	FALSE	canonical	3	588	junction_1	68.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGCTTCCCGTCCTTCC	-4	True	NA	12	True	AATAAA	-17	NA	6481479	6484681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_6481556_6481756_6481853_6482044
H1_mix_00012249	chr11	+	5084	4	FSM	ENSG00000132286.12	ENST00000533379.1	608	4	-28	-4448	-21	2825	multi-exon	FALSE	canonical	3	50	junction_3	291.326086866399	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGCTTATATCCAGAACT	-4	True	NA	55	True	NA	NA	NA	6481479	6487506	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_6481556_6481756_6481853_6482044_6482290_6482839
H1_mix_00012254	chr11	+	2557	3	FSM	ENSG00000179532.13	ENST00000533649.1	2557	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	3	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGTGTTCTGTTCTTAA	NA	False	NA	7	True	AATATA	-16	NA	6546042	6549037	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_6547667_6547862_6548403_6548644
H1_mix_00012256	chr11	+	1630	12	FSM	ENSG00000166333.14	ENST00000532063.5	1617	12	-13	0	-13	0	multi-exon	FALSE	canonical	3	145	junction_2	317.081004849492	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGTGGGGACATGGGGA	NA	False	NA	20	True	AATAAA	-19	NA	6603694	6610874	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_6603823_6604225_6604361_6608393_6608490_6608693_6608791_6608883_6608968_6609070_6609157_6609298_6609409_6609511_6609640_6609723_6609846_6609935_6610036_6610147_6610279_6610461
H1_mix_00012258	chr11	+	1706	13	FSM	ENSG00000166333.14	ENST00000420936.6	1692	13	-14	0	0	0	multi-exon	FALSE	canonical	3	608	junction_1	155.99330024787	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCCCGCCTGTCACAAT	-29	True	NA	-21	True	NA	NA	NA	6603743	6610833	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_6603823_6604225_6604361_6608045_6608212_6608393_6608490_6608693_6608791_6608883_6608968_6609070_6609157_6609298_6609409_6609511_6609640_6609723_6609846_6609935_6610036_6610147_6610279_6610461
H1_mix_00012259	chr11	+	1775	13	FSM	ENSG00000166333.14	ENST00000299421.9	1759	13	-16	0	0	0	multi-exon	FALSE	canonical	3	365	junction_1	219.683800545744	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTGGTGTGGGGACATG	-15	True	NA	16	True	AATAAA	-15	NA	6603757	6610870	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_6603823_6604179_6604361_6608045_6608212_6608393_6608490_6608693_6608791_6608883_6608968_6609070_6609157_6609298_6609409_6609511_6609640_6609723_6609846_6609935_6610036_6610147_6610279_6610461
H1_mix_00012261	chr11	+	2094	12	FSM	ENSG00000166333.14	ENST00000396751.6	2074	12	-20	0	0	0	multi-exon	FALSE	canonical	3	1017	junction_5	61.2535713244542	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTGGTGTGGGGACATG	23	True	NA	16	True	AATAAA	-15	NA	6603795	6610870	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_6604361_6608045_6608212_6608393_6608490_6608693_6608791_6608883_6608968_6609070_6609157_6609298_6609409_6609511_6609640_6609723_6609846_6609935_6610036_6610147_6610279_6610461
H1_mix_00012269	chr11	+	759	8	FSM	ENSG00000166387.14	ENST00000529575.5	780	8	21	0	21	0	multi-exon	FALSE	canonical	3	7	junction_1	117.037234612384	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGATTGTGATGGTCACTC	-2	True	NA	NA	False	GGGGCT	-25	NA	7573925	7629511	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_7574023_7593131_7593225_7597559_7597674_7610290_7610423_7620934_7621028_7625776_7625892_7628284_7628347_7629458
H1_mix_00012270	chr11	+	2970	20	FSM	ENSG00000166387.14	ENST00000530181.5	2965	20	-5	0	-5	0	multi-exon	FALSE	canonical	3	203	junction_12	20.5478968870781	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCTCACCATATCTTTAA	3	True	NA	33	True	AATAAA	-24	NA	7605732	7653760	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_7606016_7610290_7610423_7620934_7621028_7625776_7625892_7628284_7628347_7629458_7629535_7630924_7631029_7632866_7632935_7634494_7634553_7635551_7635594_7639731_7639871_7641478_7641621_7642297_7642427_7648386_7648538_7648799_7648912_7649146_7649236_7649531_7649655_7650839_7650966_7651655_7651845_7653023
H1_mix_00012271	chr11	+	2647	21	NIC	ENSG00000166387.14	novel	2965	20	NA	NA	8	-2	combination_of_known_junctions	FALSE	canonical	3	24	junction_20	53.4373230991224	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGCAAGCAGCTCACCA	16	False	NA	24	True	AATAAA	-15	NA	7605745	7653751	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_7606016_7610290_7610423_7620934_7621028_7625776_7625892_7628284_7628347_7629458_7629535_7630924_7631029_7632866_7632935_7634494_7634553_7635551_7635594_7639731_7639871_7641478_7641621_7642297_7642427_7648386_7648538_7648799_7648912_7649146_7649236_7649531_7649655_7650839_7650966_7651655_7651845_7653023_7653201_7653501
H1_mix_00012273	chr11	+	2042	16	FSM	ENSG00000166387.14	ENST00000530582.5	2042	16	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_14	79.541072548855	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGGCTCTCACACTCGAG	NA	False	NA	NA	False	NA	NA	NA	7630998	7657127	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_7631029_7632866_7632935_7634494_7634553_7635551_7635594_7639731_7639871_7641478_7641621_7642297_7642427_7648386_7648538_7648799_7648912_7649146_7649236_7649531_7649655_7650839_7650966_7651655_7651845_7653023_7653201_7655432_7655499_7656726
H1_mix_00012275	chr11	+	442	1	FSM	ENSG00000170688.4	ENST00000305754.2	927	1	-80	565	-80	-565	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCTACGTGGCCATCTGCA	NA	False	NA	NA	False	NA	NA	NA	7848619	7849061	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_7848600_7849100
H1_mix_00012276	chr11	+	1784	7	FSM	ENSG00000175390.15	ENST00000531572.2	1784	7	0	0	0	0	multi-exon	FALSE	canonical	3	2169	junction_2	106.662630131957	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATAAACGGAGCCTACCT	0	True	NA	-32	True	NA	NA	NA	7987336	7996139	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_7987717_7991780_7991852_7992083_7992164_7992886_7993025_7994425_7994518_7994981_7995119_7995253
H1_mix_00012279	chr11	+	4315	8	FSM	ENSG00000175390.15	ENST00000678132.1	4308	8	-7	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	862.738733597246	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTGGTGGCACGCACCTG	0	True	NA	NA	False	AATACA	-12	NA	7987336	7999127	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_7987717_7991780_7991972_7992083_7992164_7992886_7993025_7994425_7994518_7994981_7995119_7995253_7995368_7995944
H1_mix_00012281	chr11	+	1414	5	FSM	ENSG00000175390.15	ENST00000530219.2	1569	5	155	0	155	0	multi-exon	FALSE	canonical	3	2422	junction_2	17.5979402203781	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAAACGGAGCCTACCTT	4602	False	NA	-31	True	NA	NA	NA	7992003	7996140	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_7992164_7992886_7993025_7994425_7994518_7994981_7995119_7995253
H1_mix_00012282	chr11	+	6458	12	FSM	ENSG00000166402.9	ENST00000299506.3	6445	12	-13	0	-13	0	multi-exon	FALSE	canonical	3	10	junction_3	4.41634829145132	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGTACTTTTTTCAT	NA	False	NA	8	True	ATTAAA	-18	NA	8081197	8106243	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_8081549_8089609_8089662_8090068_8090232_8094045_8094190_8095497_8095666_8096684_8096807_8097227_8097426_8097713_8097827_8098757_8098876_8100502_8100602_8100825_8100998_8101485
H1_mix_00012283	chr11	+	6967	9	ISM	ENSG00000166402.9	ENST00000299506.3	6445	12	11760	0	11760	0	3prime_fragment	FALSE	canonical	3	12	junction_8	3.91910385164772	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGTACTTTTTTCAT	9850	False	NA	8	True	ATTAAA	-18	NA	8092970	8106243	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_8094190_8095497_8095666_8096684_8096807_8097227_8097426_8097713_8097827_8098757_8098876_8100502_8100602_8100825_8100998_8101485
H1_mix_00012286	chr11	+	867	4	FSM	ENSG00000166441.13	ENST00000531978.5	867	4	0	0	0	0	multi-exon	FALSE	canonical	3	3888	junction_1	1565.53526522614	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGGAGGAGGCTTATGC	13	True	NA	NA	False	NA	NA	NA	8682787	8685415	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_8682817_8683201_8683266_8684005_8684082_8684717
H1_mix_00012287	chr11	+	655	5	FSM	ENSG00000166441.13	ENST00000534599.5	651	5	-4	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	2811.25207870088	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTGTGGTGTGAGTGTA	13	True	NA	26	True	ATTAAA	-14	NA	8682787	8685845	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_8682817_8683201_8683266_8683862_8684082_8684717_8684893_8685677
H1_mix_00012288	chr11	+	956	4	FSM	ENSG00000166441.13	ENST00000530022.5	878	4	-81	3	-59	0	multi-exon	FALSE	canonical	3	6431	junction_3	366.756352667847	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTGTGGTGTGAGTGTA	420	False	NA	26	True	ATTAAA	-14	NA	8682728	8685845	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_8683266_8684005_8684082_8684717_8684893_8685677
H1_mix_00012289	chr11	+	410	5	FSM	ENSG00000166441.13	ENST00000532359.5	406	5	-4	0	0	0	multi-exon	FALSE	canonical	3	69	junction_3	2784.95550907012	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGTGTGAGTGTAGGT	13	True	NA	29	True	ATTAAA	-17	NA	8682787	8685848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_8682817_8683201_8683266_8684005_8684082_8684822_8684893_8685677
H1_mix_00012290	chr11	+	805	2	FSM	ENSG00000166441.13	ENST00000530913.1	805	2	0	0	0	0	multi-exon	FALSE	canonical	3	6431	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGTGTGAGTGTAGGT	217	False	NA	29	True	ATTAAA	-17	NA	8684258	8685848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_8684893_8685677
H1_mix_00012292	chr11	+	1348	6	FSM	ENSG00000166452.12	ENST00000309377.9	1273	6	-75	0	-25	0	multi-exon	FALSE	canonical	3	63	junction_1	80.8099003835545	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAATTCATTTTTATTAAG	-8	True	NA	14	True	AATAAA	-17	NA	8911113	8920079	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_8911224_8911443_8911672_8912452_8912534_8914825_8914931_8917286_8917368_8919336
H1_mix_00012293	chr11	+	3383	3	FSM	ENSG00000166452.12	ENST00000529876.5	1421	3	-2	-1960	-2	0	multi-exon	FALSE	canonical	3	129	junction_1	68	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAATTCATTTTTATTAAG	-5	True	NA	14	True	AATAAA	-17	NA	8911186	8920079	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_8911672_8914825_8914931_8917286
H1_mix_00012294	chr11	+	1127	5	FSM	ENSG00000166452.12	ENST00000534147.5	1022	5	-105	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	70.8007768318964	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGACCTCGTGATCCACC	50	False	NA	NA	False	NA	NA	NA	8911337	8919862	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_8911672_8912452_8912534_8914825_8914931_8917286_8917368_8919336
H1_mix_00012295	chr11	+	1084	4	FSM	ENSG00000166452.12	ENST00000396648.6	1084	4	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	61.478090044792	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGGATTACAGGCGTGA	50	False	NA	NA	False	NA	NA	NA	8911337	8919900	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_8911672_8914825_8914931_8917286_8917368_8919336
H1_mix_00012297	chr11	+	6219	25	FSM	ENSG00000205339.10	ENST00000379719.8	6162	25	-57	0	-57	0	multi-exon	TRUE	canonical	0	0	junction_2	47.3988506365573	1490	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATAAAACTGTCAGTTCT	4	True	NA	13	True	AATAAA	-22	NA	9384594	9448127	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_9384848_9403289_9403372_9408485_9408640_9409927_9410087_9414254_9414412_9417058_9417149_9420410_9420506_9420613_9420699_9423005_9423141_9423776_9423877_9424913_9424991_9425145_9425263_9428539_9428630_9429030_9429197_9429673_9429835_9430874_9431004_9433569_9433637_9433720_9433847_9434933_9435032_9436270_9436367_9437753_9437975_9438079_9438286_9440454_9440662_9442080_9442198_9445096
H1_mix_00012300	chr11	+	2881	16	NIC	ENSG00000166478.10	novel	2900	16	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	50.81705750369	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTATATTTATTTATTTA	5	True	NA	20	True	AATACA	-19	NA	9461023	9528524	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_9461077_9471305_9471421_9472676_9472770_9473940_9474025_9474552_9474634_9478389_9478587_9479471_9479547_9494645_9494766_9496302_9496379_9497674_9497801_9501090_9501271_9508618_9508847_9512447_9512597_9516200_9516363_9525239_9525387_9527529
H1_mix_00012301	chr11	+	7526	4	FSM	ENSG00000166483.12	ENST00000524549.1	5187	4	-1879	-460	-59	460	multi-exon	FALSE	canonical	3	610	junction_2	35.3270434653114	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCATCCCGTGCTCAAGCA	371	False	NA	NA	False	NA	NA	NA	9573610	9581947	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_9576094_9576229_9576294_9576486_9576660_9577141
H1_mix_00012303	chr11	+	9160	6	FSM	ENSG00000238387.1_ENSG00000166483.12	ENST00000530712.6	2488	6	-3199	-3473	0	1	multi-exon	FALSE	canonical	3	596	junction_2	56.5805620332637	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTTGTTCTGATTTTTG	2241	False	NA	8	True	AATAAA	-15	NA	9578027	9593458	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_9581679_9585257_9585354_9585441_9585528_9586448_9586620_9586710_9586857_9588448
H1_mix_00012306	chr11	+	3543	11	FSM	ENSG00000133789.15	ENST00000447399.6	3538	11	-5	0	-5	0	multi-exon	FALSE	canonical	3	49	junction_2	129.60339501726	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTATAGTTGCCTTTATAA	-37	True	NA	-13	True	AATAAA	-19	NA	9664071	9751821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_9664279_9694145_9694287_9724657_9724886_9728052_9728200_9729342_9729452_9732528_9732711_9738212_9738321_9740180_9740348_9747857_9748057_9749086_9749184_9749863
H1_mix_00012308	chr11	+	716	3	FSM	ENSG00000133789.15	ENST00000531814.5	716	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	212	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACGTGATCTTGGCTTAC	-7	True	NA	NA	False	NA	NA	NA	9664101	9725055	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_9664279_9694145_9694287_9724657
H1_mix_00012309	chr11	+	3181	9	FSM	ENSG00000133789.15	ENST00000524817.5	3006	9	-93	-82	-35	82	multi-exon	FALSE	canonical	3	385	junction_6	46.0487174088486	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACTACAGCCTGGGGGAC	3643	False	NA	NA	False	NA	NA	NA	9664041	9742035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_9664279_9694145_9694287_9713465_9713640_9724657_9724886_9728052_9728200_9729342_9729452_9732528_9732711_9738212_9738321_9740180
H1_mix_00012315	chr11	+	9994	28	FSM	ENSG00000170242.19	ENST00000527733.7	9994	28	0	0	0	0	multi-exon	TRUE	canonical	3	174	junction_11	25.5726727430054	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATTTCACTCAGGACTGA	-20	True	NA	NA	False	NA	NA	NA	11841971	11961887	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_11842225_11880176_11880381_11884466_11884581_11891967_11892107_11897596_11897694_11902714_11902861_11903262_11903343_11905398_11905549_11920155_11920252_11920341_11920495_11922723_11922892_11929433_11929566_11930043_11930121_11930695_11930752_11933003_11933117_11933830_11933936_11936302_11936511_11938256_11938373_11940428_11940549_11942334_11943113_11947944_11948121_11948477_11948559_11949888_11950005_11950363_11950483_11952740_11952872_11954896_11954945_11955033_11955165_11956000
H1_mix_00012318	chr11	+	411	3	FSM	ENSG00000133816.18	ENST00000533219.5	752	3	256	85	256	10	multi-exon	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCAAGGAAGAGGACTCCA	NA	False	NA	NA	False	NA	NA	NA	12224693	12227108	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_12224821_12226170_12226371_12227024
H1_mix_00012322	chr11	+	3063	11	FSM	ENSG00000187079.20	ENST00000527575.6	3063	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	14.6219013811474	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAGCAAAACACTAAGCC	454	False	NA	NA	False	NA	NA	NA	12675502	12939065	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_12675562_12764178_12764435_12862249_12862315_12864837_12864901_12879707_12879843_12881004_12881052_12881895_12881958_12883000_12883126_12924911_12925053_12930173_12930327_12937108
H1_mix_00012323	chr11	+	2831	20	FSM	ENSG00000133794.20	ENST00000401424.6	2807	20	-24	0	2	0	multi-exon	FALSE	canonical	3	18	junction_5	12.9064393728603	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATACTGTTCACATTTC	NA	False	NA	NA	False	AATAAA	-16	NA	13277753	13387261	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_13277924_13309986_13310060_13349944_13350071_13354300_13354449_13355225_13355297_13356738_13356778_13357054_13357097_13358433_13358592_13360344_13360425_13365499_13365593_13366664_13366783_13369617_13369768_13372165_13372410_13374094_13374202_13375611_13375763_13376639_13376729_13378336_13378446_13381160_13381255_13385688_13385792_13386595
H1_mix_00012324	chr11	+	2694	19	NIC	ENSG00000133794.20	novel	2776	20	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_11	10.6608780589431	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGTTCACATTTCAAATA	0	True	NA	NA	False	AATAAA	-21	NA	13277824	13387266	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_13277924_13309986_13310060_13349944_13350071_13354300_13354449_13356738_13356778_13357054_13357097_13358433_13358592_13360344_13360425_13365499_13365593_13366664_13366783_13369617_13369768_13372165_13372410_13374094_13374202_13375611_13375763_13376639_13376729_13378336_13378446_13381160_13381255_13385688_13385792_13386595
H1_mix_00012325	chr11	+	2759	20	FSM	ENSG00000133794.20	ENST00000673626.1	2759	20	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	12.1194424965257	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATACTGTTCACATTTC	4	True	NA	NA	False	AATAAA	-16	NA	13277828	13387261	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_13277924_13309986_13310060_13349944_13350071_13354300_13354449_13355225_13355297_13356738_13356778_13357054_13357097_13358433_13358592_13360344_13360425_13365499_13365593_13366664_13366783_13369617_13369768_13372162_13372410_13374094_13374202_13375611_13375763_13376639_13376729_13378336_13378446_13381160_13381255_13385688_13385792_13386595
H1_mix_00012328	chr11	+	5820	3	FSM	ENSG00000197601.13	ENST00000532502.1	5820	3	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_2	2.5	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGATGTGCTCCTTTGCA	NA	False	NA	21	True	ATTAAA	-22	NA	13719902	13732346	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_13721860_13727555_13727684_13728611
H1_mix_00012333	chr11	+	3353	3	NIC	ENSG00000254946.2	novel	571	5	NA	NA	-153	-2601	combination_of_known_splicesites	FALSE	canonical	3	27	junction_2	3.5	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	15552701	15588497	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_15552914_15561877_15562229_15585707
H1_mix_00012334	chr11	+	735	3	FSM	ENSG00000254946.2	ENST00000659618.1	743	3	8	0	8	0	multi-exon	FALSE	canonical	2	5	junction_2	11	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGAGGAAGGAATGGTTA	6	False	NA	NA	False	AATAAA	-20	NA	15561826	15604169	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_15562229_15585707_15585803_15603931
H1_mix_00012337	chr11	+	3920	5	FSM	ENSG00000110696.10	ENST00000228136.9	3920	5	0	0	0	0	multi-exon	FALSE	canonical	3	2521	junction_3	127.779839959205	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGCACTGCCCATTACC	-3	True	NA	20	True	AGTAAA	-17	NA	16738646	16758340	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_16738842_16744600_16744685_16748096_16748158_16752784_16752895_16754870
H1_mix_00012340	chr11	+	4266	2	FSM	ENSG00000110696.10	ENST00000531658.1	4258	2	-9	1	-9	0	multi-exon	FALSE	canonical	3	2700	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTAGCATCATCAACCCT	3979	False	NA	25	True	AATAAA	-22	NA	16749104	16755346	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_16752895_16754870
H1_mix_00012346	chr11	+	3465	14	FSM	ENSG00000070081.18	ENST00000529010.6	2300	14	0	-1165	0	1165	multi-exon	TRUE	canonical	3	331	junction_7	38.5838056595199	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTACAGTCTATTGCAG	10	True	NA	NA	False	NA	NA	NA	17276738	17333376	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_17276829_17282788_17282944_17295323_17295468_17296103_17296212_17301743_17301871_17309571_17309676_17310824_17311011_17311192_17311284_17311871_17311931_17312027_17312121_17315385_17315476_17330126_17330298_17330901_17330984_17331411
H1_mix_00012348	chr11	+	1277	11	NIC	ENSG00000070081.18	novel	2300	14	NA	NA	-15596	1	combination_of_known_junctions	FALSE	canonical	3	58	junction_8	111.10157514635	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTGAAATAAAGGGAGAT	-13	True	NA	NA	False	AATAAA	-14	NA	17295323	17331523	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_17295468_17296103_17296212_17301743_17301871_17309571_17309676_17310824_17311011_17311192_17311284_17311871_17311931_17312027_17312121_17330126_17330298_17330901_17330984_17331411
H1_mix_00012349	chr11	+	1275	1	FSM	ENSG00000260196.1	ENST00000568280.1	2883	1	-262	1870	-262	-1870	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAAGTCTGTTTTGCTTC	NA	False	NA	14	True	AGTAAA	-22	NA	17380386	17381661	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_17380400_17381700
H1_mix_00012352	chr11	+	530	4	FSM	ENSG00000173432.13	ENST00000356524.9	518	4	-12	0	-8	0	multi-exon	FALSE	canonical	1	1	junction_1	0.942809041582063	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGAAACTGGGTGTTA	21	False	NA	NA	False	AATAAA	-17	NA	18266251	18269967	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_18266297_18266883_18266979_18269194_18269334_18269716
H1_mix_00012360	chr11	+	1342	7	FSM	ENSG00000134333.14	ENST00000545215.5	1340	7	-2	0	0	0	multi-exon	FALSE	canonical	2	143	junction_2	1508.50537692851	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTCCCAGTGAGTCACA	-3	True	NA	-35	True	NA	NA	NA	18394560	18407642	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_18394637_18396818_18396969_18400836_18401011_18402839_18403014_18403693_18403812_18405448_18405573_18407116
H1_mix_00012361	chr11	+	1311	7	FSM	ENSG00000134333.14	ENST00000430553.6	1310	7	-1	0	0	0	multi-exon	FALSE	canonical	1	60	junction_3	1575.41970598314	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATCCAGTGTATAAATCCA	-3	True	NA	-10	True	NA	NA	NA	18394560	18407667	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_18394637_18396818_18396969_18399430_18399549_18402839_18403014_18403693_18403812_18405448_18405573_18407116
H1_mix_00012362	chr11	+	1887	7	FSM	ENSG00000134333.14	ENST00000227157.8	1887	7	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_6	1505.948870314	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGGCTCATGCCTATA	22	False	NA	5	True	ATTAAA	-19	NA	18394585	18408218	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_18394637_18396818_18396969_18399430_18399549_18400836_18401011_18402839_18403014_18403693_18403812_18407116
H1_mix_00012363	chr11	+	2274	8	FSM	ENSG00000134333.14	ENST00000540430.5	2305	8	31	0	19	0	multi-exon	FALSE	canonical	3	143	junction_1	1449.11992996735	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGGCTCATGCCTATA	1702	False	NA	5	True	ATTAAA	-19	NA	18396296	18408218	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_18396611_18396818_18396969_18399430_18399549_18400836_18401011_18402839_18403014_18403693_18403812_18405448_18405573_18407116
H1_mix_00012366	chr11	+	875	6	FSM	ENSG00000166796.12	ENST00000544105.5	875	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	5.29150262212918	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAAGCCTTCTAATGTTC	334	False	NA	NA	False	NA	NA	NA	18412717	18451127	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_18412844_18415183_18415302_18429736_18429911_18434739_18434914_18438527_18438646_18450962
H1_mix_00012368	chr11	+	1690	1	FSM	ENSG00000279837.1	ENST00000623697.1	768	1	-851	-71	-851	71	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCACAAAGCCAATAGTTAA	1032	False	NA	NA	False	AATGAA	-34	NA	18601030	18602720	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_18601000_18602700
H1_mix_00012378	chr11	+	1521	6	FSM	ENSG00000109854.14	ENST00000419348.6	1477	6	-48	4	10	0	multi-exon	FALSE	canonical	3	193	junction_1	78.3239426995347	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGGGTGCCTCTTAGAT	NA	False	NA	14	True	AATAAA	-22	NA	20363694	20383778	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_20363913_20364236_20364433_20367173_20367282_20376579_20376718_20382177_20382240_20382979
H1_mix_00012379	chr11	+	1358	6	FSM	ENSG00000109854.14	ENST00000421577.6	886	6	-28	-444	10	0	multi-exon	FALSE	canonical	3	85	junction_1	120.980990242269	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGGGTGCCTCTTAGAT	NA	False	NA	14	True	AATAAA	-22	NA	20363694	20383778	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_20363750_20364236_20364433_20367173_20367282_20376579_20376718_20382177_20382240_20382979
H1_mix_00012380	chr11	+	1849	5	FSM	ENSG00000109854.14	ENST00000451739.7	1830	5	-19	0	10	0	multi-exon	FALSE	canonical	3	366	junction_4	17.1901134376711	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGCCTCTTAGATTGCT	NA	False	NA	18	True	AATAAA	-26	NA	20363694	20383782	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_20364433_20367173_20367282_20376579_20376718_20382177_20382240_20382979
H1_mix_00012384	chr11	+	2552	16	FSM	ENSG00000185238.13	ENST00000331079.11	2552	16	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_4	32.2981939639562	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATATTTCAACAGGGTA	-1	True	NA	80	True	AATAAA	-19	NA	20387715	20509338	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_20387775_20388018_20388155_20389743_20389827_20392210_20392261_20392896_20393000_20395802_20395963_20397576_20397722_20402918_20402985_20407910_20408033_20426765_20426866_20452129_20452209_20461979_20462168_20464459_20464547_20493918_20493970_20494166_20494255_20508303
H1_mix_00012388	chr11	+	1177	1	FSM	ENSG00000148935.12	ENST00000648096.1	895	1	0	-282	0	282	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTAATTCATTTGAGCTG	303	False	NA	NA	False	NA	NA	NA	22625508	22626685	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_22625500_22626700
H1_mix_00012390	chr11	+	1476	1	Intergenic	novelGene_230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGATAGCGTTTAATTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	23103353	23104829	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_23103400_23104800
H1_mix_00012391	chr11	+	1226	6	FSM	ENSG00000255418.6	ENST00000661041.1	732	6	-494	0	-494	0	multi-exon	FALSE	canonical	2	3	junction_2	6.71118469422501	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTAGTTCCTTTGGAATTT	NA	False	NA	NA	False	AATAAA	-5	NA	23154188	23166791	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_23154794_23155210_23155404_23163495_23163603_23165189_23165334_23166492_23166614_23166735
H1_mix_00012392	chr11	+	519	1	Intergenic	novelGene_231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGGCTGCTTCAAGCGGG	NA	False	NA	NA	False	NA	NA	NA	23183973	23184492	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_23184000_23184500
H1_mix_00012398	chr11	+	4225	7	FSM	ENSG00000169519.21	ENST00000407364.8	4208	7	-17	0	-17	0	multi-exon	FALSE	canonical	3	14	junction_1	41.4785754603774	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGACTGCCTTCTATG	-15	True	NA	15	True	AATAAA	-16	NA	28108370	28333507	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_28108453_28110165_28110402_28113317_28113605_28211061_28211199_28290205_28290398_28296752_28296932_28330395
H1_mix_00012399	chr11	+	4180	7	NNC	ENSG00000169519.21	novel	4208	7	NA	NA	30	0	intron_retention	FALSE	canonical	2	4	junction_1	44.8878231446644	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGACTGCCTTCTATG	32	True	NA	15	True	AATAAA	-16	NA	28108417	28333507	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_28108455_28110165_28110402_28113317_28113605_28211061_28211199_28290205_28290398_28296752_28296932_28330395
H1_mix_00012400	chr11	+	3988	6	ISM	ENSG00000169519.21	ENST00000407364.8	4208	7	1930	3	3	-3	3prime_fragment	FALSE	canonical	3	90	junction_4	19.089263998384	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTTGACTGCCTTCT	19	True	NA	12	True	AATAAA	-13	NA	28110317	28333504	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_28110402_28113317_28113605_28211061_28211199_28290205_28290398_28296752_28296932_28330395
H1_mix_00012403	chr11	+	3452	3	FSM	ENSG00000170946.15	ENST00000529086.5	2745	3	-35	-672	-35	672	multi-exon	FALSE	canonical	3	82	junction_2	6.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTTTAGAGCAATGTTG	0	True	NA	NA	False	NA	NA	NA	31369804	31418010	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_31369913_31370715_31370860_31414810
H1_mix_00012407	chr11	+	8085	10	FSM	ENSG00000109911.19	ENST00000640961.2	8093	10	-5	13	0	-13	multi-exon	FALSE	canonical	0	0	junction_4	55.7861879449752	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTCTGGAAAACCAATGT	-10	True	NA	NA	False	AATAAA	-3	NA	31509761	31790311	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_31510008_31520055_31520092_31539661_31539784_31594769_31594902_31603767_31603908_31627109_31627195_31632216_31632406_31647740_31647850_31650114_31650222_31783392
H1_mix_00012411	chr11	+	1697	6	FSM	ENSG00000149100.13	ENST00000531921.5	1697	6	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	1024.6939835873	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGAATAATAAAGACTTCA	0	True	NA	NA	False	NA	NA	NA	32583797	32596015	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_32583930_32587011_32587145_32588593_32588733_32589546_32589642_32593865_32595014_32595965
H1_mix_00012414	chr11	+	5543	6	FSM	ENSG00000135378.4	ENST00000257836.4	5543	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	2.8	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTATTGCTTGTTTCAT	5	True	NA	7	True	AATAAA	-16	NA	32829926	32858120	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_32830174_32830507_32830633_32836657_32836822_32838881_32838931_32840106_32840240_32853295
H1_mix_00012417	chr11	+	2416	9	FSM	ENSG00000060749.16	ENST00000524678.1	2416	9	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	25.2574246509813	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTCTCTCACAGTGTA	1548	False	NA	7	True	AATAAA	-16	NA	32934583	32975630	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_32935436_32953856_32954180_32955295_32955413_32955987_32956122_32957868_32958087_32966299_32966438_32969045_32969144_32973396_32973550_32975247
H1_mix_00012421	chr11	+	2649	10	FSM	ENSG00000176148.16	ENST00000334274.9	2649	10	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_6	9.32274531706801	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGGAATTAGATTTAACT	-24	True	NA	10	True	ATTAAA	-1	NA	33039571	33073550	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_33039793_33043749_33043937_33054592_33054726_33057114_33057236_33057918_33058140_33058958_33059096_33061529_33061727_33065829_33066012_33068686_33068860_33072473
H1_mix_00012425	chr11	+	7614	17	FSM	ENSG00000110422.12	ENST00000303296.9	7614	17	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_12	23.8563408761696	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTGTTGACTTTTTTTC	11	True	NA	16	True	ATTAAA	-20	NA	33257380	33357023	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_33257890_33286412_33287512_33328509_33328634_33337074_33337195_33338756_33338844_33339349_33339535_33340967_33341128_33341562_33341687_33347292_33347415_33347628_33347754_33347851_33348014_33348165_33348229_33348521_33348819_33349146_33349288_33351607_33351844_33352137_33352266_33353091
H1_mix_00012427	chr11	+	11618	20	FSM	ENSG00000110427.17	ENST00000321505.9	11618	20	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2.08941402539781	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCTGCCTGTTTCTCAT	141	False	NA	NA	False	AATAAA	-23	NA	33542330	33674098	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_33544337_33544766_33545379_33547763_33547880_33551039_33551260_33552107_33552242_33559748_33559912_33561675_33561736_33568075_33568228_33574701_33574874_33583337_33583502_33591236_33591422_33598819_33598948_33606640_33606823_33609748_33609967_33618532_33618663_33645685_33646037_33656011_33656110_33658749_33658899_33660862_33661015_33667872
H1_mix_00012430	chr11	+	6739	18	FSM	ENSG00000135387.21	ENST00000532820.5	3438	18	0	-3301	0	1155	multi-exon	FALSE	canonical	3	992	junction_17	98.4053828668058	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGGCTGTATT	478	False	NA	-62	True	NA	NA	NA	34052209	34103765	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_34052637_34071725_34071789_34071900_34071988_34076235_34076475_34076559_34076643_34079627_34079766_34082824_34082878_34082954_34083042_34086063_34086220_34086304_34086414_34089394_34089457_34090178_34090290_34090528_34090679_34091905_34092057_34096478_34096674_34097195_34097297_34097697_34097762_34099302
H1_mix_00012431	chr11	+	3454	17	FSM	ENSG00000135387.21	ENST00000530820.5	3454	17	0	0	0	0	multi-exon	FALSE	canonical	3	1074	junction_2	82.0750418824139	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAATGAGTACTGGTGGA	-8	True	NA	9	True	AATAAA	-18	NA	34052328	34099058	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_34052637_34071725_34071789_34071900_34071988_34076235_34076475_34076559_34076643_34079627_34079766_34082824_34082878_34082954_34083042_34086063_34086220_34086304_34086414_34089394_34089457_34090178_34090290_34090528_34090679_34091905_34092057_34096478_34096674_34097195_34097297_34097697
H1_mix_00012434	chr11	+	1774	3	Genic_Genomic	ENSG00000271369.1	novel	562	1	NA	NA	-17264	560	multi-exon	FALSE	canonical	1	4	junction_1	11.5	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGCCTTACATGTTT	NA	False	NA	15	True	AATAAA	-18	NA	34692335	34710721	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr11_+_34692497_34692727_34692890_34709270
H1_mix_00012436	chr11	+	1811	6	Intergenic	novelGene_237	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_1	15.7810012356631	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCTATGTTTATTATCT	NA	False	NA	11	True	AATAAA	-23	NA	34692335	34877679	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_34692890_34714693_34714808_34715056_34715235_34732284_34732430_34754457_34754608_34877009
H1_mix_00012439	chr11	+	4288	9	FSM	ENSG00000026508.21	ENST00000263398.11	4288	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	7.806247497998	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGAAGTCTCTAATTTAA	0	True	NA	NA	False	ATTAAA	-32	NA	35139170	35232402	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_35139371_35176574_35176741_35180273_35180408_35186831_35186901_35189834_35190066_35214851_35214915_35219315_35219388_35221653_35221733_35229128
H1_mix_00012442	chr11	+	12994	5	FSM	ENSG00000166326.7	ENST00000299413.7	12994	5	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_3	23.7315717979235	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTCTCAGGTGTTTCTT	2	True	NA	NA	False	ATTAAA	-16	NA	35662774	35818007	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_35663781_35685258_35685337_35725923_35726164_35735425_35735446_35806357
H1_mix_00012443	chr11	+	3833	6	FSM	ENSG00000179241.13	ENST00000315571.6	3814	6	-19	0	-19	0	multi-exon	FALSE	canonical	3	141	junction_5	15.8619040471187	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTGTGCAAATGGTCC	-26	True	NA	22	True	AATAAA	-18	NA	35944042	36232136	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_35944145_36036102_36036250_36081652_36081779_36098326_36098462_36227084_36227431_36229159
H1_mix_00012444	chr11	+	553	3	FSM	ENSG00000135362.14	ENST00000527751.5	553	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.5	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTGACAGCTTTCCAA	2	True	NA	NA	False	GGGGCT	-7	NA	36376400	36396196	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_36376705_36393845_36394012_36396113
H1_mix_00012445	chr11	+	783	3	FSM	ENSG00000135362.14	ENST00000526679.1	783	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTATGTGGCAGGCCAGA	937	False	NA	NA	False	AAAACA	-2	NA	36398411	36403375	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_36398828_36400996_36401286_36403297
H1_mix_00012451	chr11	+	1206	6	FSM	ENSG00000166352.18	ENST00000617650.5	1207	6	1	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	107.767527576724	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTGTGCACTCATTTA	-18	True	NA	34	True	AATAAA	-35	NA	36594501	36659289	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_36594916_36610080_36610240_36633283_36633439_36636050_36636118_36648015_36648156_36659018
H1_mix_00012453	chr11	+	661	4	FSM	ENSG00000166352.18	ENST00000527108.6	646	4	-15	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	108.70142593361	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCCCTTTGTGGAAATT	11	True	NA	14	True	AATAAA	-15	NA	36594530	36659269	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_36594642_36610080_36610240_36648015_36648156_36659018
H1_mix_00012455	chr11	+	513	2	FSM	ENSG00000166181.13	ENST00000530300.1	553	2	-11	51	0	-51	multi-exon	FALSE	canonical	3	2022	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGGCTTAAATTTACATAT	-33	True	NA	NA	False	AATAAA	-33	NA	43311977	43318933	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_43312197_43318639
H1_mix_00012457	chr11	+	3728	14	FSM	ENSG00000166181.13	ENST00000378852.7	3714	14	-14	0	0	0	multi-exon	FALSE	canonical	3	793	junction_13	266.767212307154	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGTCTTGATGTGTT	-22	True	NA	18	True	AATAAA	-18	NA	43311988	43344529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_43312197_43318639_43318802_43320820_43320915_43321410_43321477_43321984_43322137_43323429_43323637_43326506_43326612_43327788_43327879_43328711_43328894_43329964_43330059_43330507_43330565_43335277_43335355_43335857_43335995_43342432
H1_mix_00012458	chr11	+	3744	14	FSM	ENSG00000166181.13	ENST00000531273.6	3726	14	-18	0	0	0	multi-exon	FALSE	canonical	3	679	junction_13	292.10679331064	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGTCTTGATGTGTT	-33	True	NA	18	True	AATAAA	-18	NA	43311977	43344529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_43312197_43318639_43318802_43320820_43320915_43321410_43321477_43321984_43322137_43323429_43323637_43326506_43326612_43327788_43327879_43328711_43328894_43329964_43330059_43330507_43330565_43335277_43335355_43335857_43335995_43342427
H1_mix_00012460	chr11	+	4511	24	FSM	ENSG00000052841.15	ENST00000039989.9	4488	24	-23	0	-23	0	multi-exon	FALSE	canonical	3	26	junction_16	182.241587513064	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTCTGTCATGTGATTTT	NA	False	NA	17	True	AATAAA	-18	NA	43358896	43494931	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_43359114_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43396708_43396819_43397346_43397492_43397973_43398114_43399887_43400049_43401445_43401559_43403997_43404145_43405513_43405630_43405785_43405952_43407137_43407216_43407352_43407578_43414589_43414777_43443324_43443585_43444055_43444210_43448001_43448123_43450081_43450242_43451181_43451266_43490238_43490359_43492019_43492164_43493772
H1_mix_00012463	chr11	+	4643	25	NIC	ENSG00000052841.15	novel	4488	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	404	junction_19	125.998835697883	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAGGTCTGTCATGTGA	-17	True	NA	13	True	AATAAA	-14	NA	43358931	43494927	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_43359114_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43396708_43396819_43397346_43397492_43397973_43398114_43399887_43400049_43401445_43401559_43403997_43404145_43405513_43405630_43405785_43405952_43407137_43407216_43407352_43407578_43414589_43414777_43436163_43436335_43443324_43443585_43444055_43444210_43448001_43448123_43450081_43450242_43451181_43451266_43490238_43490359_43492019_43492164_43493772
H1_mix_00012464	chr11	+	6714	25	NIC	ENSG00000052841.15	novel	4488	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	147	junction_19	155.667023554195	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAGGTCTGTCATGTGA	-17	True	NA	13	True	AATAAA	-14	NA	43358931	43494927	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_43359114_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43396708_43396819_43397346_43397492_43397973_43398114_43399887_43400049_43401445_43401559_43403997_43404145_43405513_43405630_43405785_43405952_43407137_43407216_43407352_43407578_43414589_43414777_43436163_43436335_43443324_43443585_43444055_43444210_43445930_43448123_43450081_43450242_43451181_43451266_43490238_43490359_43492019_43492164_43493772
H1_mix_00012465	chr11	+	1453	11	NNC	ENSG00000052841.15	novel	3648	20	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_6	316.07081485009	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTCCTCTTGATTCTT	8	True	NA	16	True	TATAAA	-32	NA	43358956	43401622	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_43359114_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43392730_43392790_43396708_43396819_43397346_43397492_43397973_43398114_43399887_43400049_43401445
H1_mix_00012473	chr11	+	1882	3	FSM	ENSG00000052841.15	ENST00000529140.1	1017	3	-21	-844	-21	0	multi-exon	FALSE	canonical	3	489	junction_2	56.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAGGTCTGTCATGTGA	3871	False	NA	13	True	AATAAA	-14	NA	43489775	43494927	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_43490359_43492019_43492164_43493772
H1_mix_00012477	chr11	+	2507	5	FSM	ENSG00000149084.13	ENST00000533090.6	2507	5	0	0	0	0	multi-exon	FALSE	canonical	3	918	junction_1	32.889017923921	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAAAAAATGGGGC	NA	False	NA	NA	False	NA	NA	NA	43830062	43856404	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_43831011_43838316_43838399_43839998_43840065_43854714_43854865_43855143
H1_mix_00012480	chr11	+	1292	9	NIC	ENSG00000166199.13	novel	1544	10	NA	NA	6	-4	combination_of_known_splicesites	FALSE	canonical	2	2	junction_7	20.9489707384396	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTCATGGATGATTTTG	16	True	NA	10	True	ATTAAA	-12	NA	43880860	43920262	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_43881180_43882582_43882732_43883084_43883189_43883982_43884018_43886605_43886654_43889724_43889829_43892040_43892130_43919037_43919137_43919917
H1_mix_00012481	chr11	+	1324	1	FSM	ENSG00000187479.8	ENST00000617612.3	1242	1	-90	8	-90	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCACAGTGCAGTTTTCC	376	False	NA	-2	True	AATAAA	-10	NA	43942546	43943870	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_43942500_43943900
H1_mix_00012486	chr11	+	10061	14	FSM	ENSG00000151348.16	ENST00000533608.7	10037	14	-24	0	6	0	multi-exon	FALSE	canonical	3	187	junction_9	29.8942910779509	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAGTATTATATGTGGAT	NA	False	NA	NA	False	AATAAA	-19	NA	44095653	44251962	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_44095853_44107682_44108249_44109193_44109284_44114184_44114302_44124788_44124985_44126815_44126956_44130044_44130139_44171610_44171743_44197828_44198019_44206792_44206960_44232352_44232497_44234114_44234244_44236292_44236376_44244148
H1_mix_00012487	chr11	+	3452	15	FSM	ENSG00000151348.16	ENST00000343631.4	3452	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	83.5179315953118	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCACATGTGTGAATTATA	101	False	NA	16	True	ATTAAA	-19	NA	44095822	44245425	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_44095853_44096224_44096322_44107682_44108249_44109193_44109284_44114184_44114302_44124788_44124985_44126815_44126956_44130044_44130139_44171610_44171743_44197828_44198019_44206792_44206960_44232352_44232497_44234114_44234244_44236292_44236376_44244148
H1_mix_00012490	chr11	+	4007	11	NIC	ENSG00000157570.12	novel	4557	10	NA	NA	23	483	combination_of_known_junctions	FALSE	canonical	1	3	junction_3	15.8748228336571	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGAGGGGTGGGCAGGGAT	8	True	NA	NA	False	NA	NA	NA	44726984	44931819	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_44727288_44764425_44764513_44860327_44860470_44897751_44897829_44906406_44906480_44909704_44909900_44917971_44918047_44919213_44919313_44919816_44920000_44926673_44926758_44929130
H1_mix_00012492	chr11	+	10729	8	FSM	ENSG00000019485.14	ENST00000683152.1	10729	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	8.72949492425839	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACCACTGTTGAATTGCT	-9	True	NA	8	True	AATAAA	-15	NA	45146638	45235109	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_45146878_45181760_45181886_45182245_45182350_45182860_45183124_45204710_45204779_45219569_45219758_45224216_45224844_45225994
H1_mix_00012493	chr11	+	661	3	FSM	ENSG00000254427.3	ENST00000669834.2	1006	3	20	325	3	229	multi-exon	FALSE	canonical	3	7	junction_2	1	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGGCTACTTATGCCTG	1	True	NA	NA	False	NA	NA	NA	45355479	45356886	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_45355603_45355878_45355926_45356395
H1_mix_00012495	chr11	+	1747	3	FSM	ENSG00000181830.9	ENST00000442528.2	1756	3	9	0	-5	0	multi-exon	FALSE	canonical	0	0	junction_1	55	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCTTCTCTATCCTCTC	1	True	NA	2	True	NA	NA	NA	45804080	45811558	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_45804518_45805809_45806337_45810775
H1_mix_00012498	chr11	+	3050	12	FSM	ENSG00000121653.11	ENST00000241014.6	3050	12	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	30.6499834845519	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAGTGGATGTATCTGCA	-4	True	NA	20	True	ATTAAA	-20	NA	45885650	45906465	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_45885922_45898084_45898191_45900137_45900453_45901979_45902062_45902371_45903185_45903364_45903441_45903988_45904162_45904454_45904565_45904717_45904835_45904970_45905042_45905150_45905250_45905648
H1_mix_00012499	chr11	+	2815	13	NIC	ENSG00000165905.18	novel	2522	13	NA	NA	-315	0	intron_retention	TRUE	canonical	0	0	junction_3	219.856945282356	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTTAAAACATCTTTTTT	708	False	NA	24	True	GGGGCT	-43	NA	45922340	45929082	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_45923168_45923472_45923556_45924153_45924278_45924505_45924678_45924784_45924890_45926038_45926152_45926221_45926348_45926441_45926598_45926710_45926872_45927444_45927594_45927919_45928070_45928176_45928373_45928629
H1_mix_00012500	chr11	+	2552	14	FSM	ENSG00000165905.18	ENST00000401752.6	2552	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	176.234747965696	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTGTTCCTGGTTTG	-22	True	NA	38	True	ATTAAA	-14	NA	45922655	45929096	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_45922729_45922820_45923168_45923472_45923556_45924153_45924278_45924505_45924678_45924784_45924890_45926038_45926152_45926221_45926348_45926441_45926598_45926710_45926872_45927314_45927594_45927919_45928070_45928176_45928373_45928629
H1_mix_00012501	chr11	+	2522	13	FSM	ENSG00000165905.18	ENST00000325468.9	2522	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	174.031127483946	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTGTTCCTGGTTTG	100	False	NA	38	True	ATTAAA	-14	NA	45922777	45929096	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_45923168_45923472_45923556_45924153_45924278_45924505_45924678_45924784_45924890_45926038_45926152_45926221_45926348_45926441_45926598_45926710_45926872_45927314_45927594_45927919_45928070_45928176_45928373_45928629
H1_mix_00012506	chr11	+	2343	12	NNC	ENSG00000157613.11	novel	528	5	NA	NA	-526	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.8492005658121	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGACTTTGTGCCTTTC	NA	False	NA	NA	False	AAAAAG	-13	NA	46294599	46321422	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_46294809_46299934_46300164_46307815_46308001_46309988_46310068_46311031_46311190_46312324_46312475_46312611_46312671_46312850_46312920_46316285_46316386_46317360_46317488_46320263_46320529_46320709
H1_mix_00012508	chr11	+	3093	31	FSM	ENSG00000149091.15	ENST00000532868.6	3118	31	25	0	25	0	multi-exon	TRUE	canonical	3	12	junction_2	135.264058624439	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGGGCCTCACCTGTTCC	26	False	NA	NA	False	NA	NA	NA	46345291	46380120	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46345586_46367290_46367400_46367654_46367748_46368001_46368080_46369493_46369551_46369940_46370010_46371312_46371385_46371486_46371604_46371703_46371776_46372074_46372171_46372427_46372511_46372616_46372678_46372770_46372885_46372960_46373102_46374156_46374236_46374398_46374455_46374603_46374667_46374765_46374840_46374933_46375046_46375431_46375632_46375850_46375952_46376065_46376146_46376327_46376398_46376523_46376565_46377072_46377213_46378197_46378230_46378456_46378501_46378990_46379112_46379202_46379237_46379468_46379569_46379830
H1_mix_00012509	chr11	+	2922	26	FSM	ENSG00000149091.15	ENST00000531879.5	2922	26	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	148.637997833663	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGATGTGGTCCGCTACCT	26	True	NA	NA	False	NA	NA	NA	46345431	46379080	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46345586_46367290_46367400_46367651_46367748_46368001_46368080_46369493_46369551_46371312_46371385_46371486_46371604_46371703_46371776_46372074_46372171_46372427_46372511_46372616_46372678_46372770_46372885_46372960_46373102_46374156_46374236_46374398_46374455_46374603_46374667_46374765_46374840_46374933_46375046_46375431_46375632_46375850_46375952_46376065_46376146_46376327_46376398_46376523_46376565_46377072_46377213_46378197_46378230_46378456
H1_mix_00012510	chr11	+	3564	30	NNC	ENSG00000149091.15	novel	3482	31	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_25	150.011240165466	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTCTGCTTTTCTTCTT	-13	True	NA	26	True	AGTAAA	-14	NA	46347449	46380549	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_46347821_46367290_46367400_46367651_46367748_46368004_46368080_46369493_46369551_46369940_46370010_46371312_46371385_46371486_46371604_46371703_46371776_46372074_46372171_46372427_46372511_46372616_46372678_46372770_46372885_46372960_46373102_46374156_46374236_46374398_46374455_46374603_46374664_46374765_46374840_46374933_46375046_46375431_46375632_46375850_46375952_46376065_46376146_46376327_46376398_46376523_46376565_46377072_46377213_46378456_46378501_46378990_46379112_46379202_46379237_46379468_46379569_46379830
H1_mix_00012512	chr11	+	5733	26	FSM	ENSG00000149091.15	ENST00000528173.5	5737	26	0	4	0	-2	multi-exon	FALSE	canonical	3	379	junction_2	60.6353032481903	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTCTGCTTTTCTTCTT	5713	False	NA	26	True	AGTAAA	-14	NA	46367314	46380549	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46367400_46367651_46367748_46368001_46370010_46371312_46371385_46371486_46371604_46371703_46371776_46372074_46372171_46372427_46372511_46372616_46372678_46372770_46372885_46372960_46373102_46374156_46374236_46374398_46374455_46374603_46374667_46374765_46374840_46374933_46375046_46375431_46375632_46375850_46375952_46376065_46376146_46376327_46376398_46376523_46376565_46377072_46377213_46378197_46378230_46378456_46379112_46379202_46379569_46379830
H1_mix_00012515	chr11	+	1999	4	FSM	ENSG00000149091.15	ENST00000534802.1	1999	4	0	0	0	0	multi-exon	FALSE	canonical	3	451	junction_3	20.8486610281492	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGCTTTTCTTCTTTT	NA	False	NA	28	True	AGTAAA	-16	NA	46377967	46380551	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46379112_46379202_46379237_46379468_46379569_46379830
H1_mix_00012517	chr11	+	992	5	FSM	ENSG00000110492.17	ENST00000359803.7	985	5	-7	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4569.42345241716	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGCCCCTTCCCAAGGA	-16	True	NA	14	True	AATAAA	-43	NA	46381060	46383825	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46381289_46382056_46382134_46382293_46382462_46382586_46382749_46383468
H1_mix_00012519	chr11	+	830	5	FSM	ENSG00000110492.17	ENST00000395566.9	830	5	0	0	0	0	multi-exon	FALSE	canonical	3	7276	junction_1	1423.58884074722	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGCTCTTCTTTTTTAA	0	True	NA	-10	True	AATAAA	-19	NA	46381668	46383801	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46381759_46382056_46382134_46382293_46382462_46382586_46382749_46383468
H1_mix_00012521	chr11	+	951	5	FSM	ENSG00000110492.17	ENST00000395565.5	951	5	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_1	4453.43206836031	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGGAGTTTGCTGTGGA	1	True	NA	26	True	AATAAA	-33	NA	46381710	46383837	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46381886_46382056_46382134_46382293_46382462_46382586_46382749_46383468
H1_mix_00012522	chr11	+	1042	4	FSM	ENSG00000110492.17	ENST00000407067.1	1026	4	-16	0	0	0	multi-exon	FALSE	canonical	3	10420	junction_2	161.831874349757	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTTTTTCCCCCCAATA	2	True	NA	17	True	AATAAA	-1	NA	46381736	46383783	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46382134_46382293_46382462_46382586_46382749_46383468
H1_mix_00012525	chr11	+	4258	19	FSM	ENSG00000175224.17	ENST00000683050.1	4246	19	-12	0	0	0	multi-exon	FALSE	canonical	2	2	junction_11	174.21482587758	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCTCCTGTCCTGTAGGT	-15	True	NA	18	True	AATAAA	-18	NA	46617540	46674518	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46617891_46630044_46630101_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46663996_46664096_46664848_46664960_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
H1_mix_00012526	chr11	+	4572	16	NIC	ENSG00000175224.17	novel	4348	17	NA	NA	-266	0	intron_retention	TRUE	canonical	3	107	junction_1	95.0444574338182	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCACCGTTATCAGCTCTT	-33	True	NA	NA	False	AGTAAA	-17	NA	46617260	46674818	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_46617891_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
H1_mix_00012527	chr11	+	2659	18	NIC	ENSG00000175224.17	novel	4199	18	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	84	junction_2	126.012247441232	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGATTTTGTCACTTGGAG	12	True	NA	17	True	AATAAA	-19	NA	46617567	46673040	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_46617891_46618259_46618376_46630044_46630101_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
H1_mix_00012528	chr11	+	4023	17	FSM	ENSG00000175224.17	ENST00000524625.5	4014	17	-9	0	0	0	multi-exon	FALSE	canonical	3	220	junction_1	72.7375418886286	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCTGTCCTGTAGGTTG	12	True	NA	20	True	AATAAA	-20	NA	46617567	46674520	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46617891_46630044_46630101_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
H1_mix_00012534	chr11	+	1470	4	FSM	ENSG00000149179.14	ENST00000532840.5	719	4	-41	-710	-11	710	multi-exon	FALSE	canonical	3	315	junction_2	14.7196014438797	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCAGATCCCCTGAAGCC	-34	True	NA	NA	False	NA	NA	NA	46936718	47138747	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46936852_46987207_46987311_47052387_47052519_47137644
H1_mix_00012535	chr11	+	1955	8	FSM	ENSG00000149179.14	ENST00000395460.6	1916	8	-41	2	-3	0	multi-exon	FALSE	canonical	3	303	junction_7	27.0788719507008	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGTGAGTCTAAAGCTC	-26	True	NA	22	True	AATAAA	-19	NA	46936726	47162245	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46936852_46987207_46987311_47052387_47052519_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47161126
H1_mix_00012536	chr11	+	1666	9	FSM	ENSG00000149179.14	ENST00000278460.12	1650	9	-16	0	0	0	multi-exon	FALSE	canonical	3	225	junction_8	44.5617549026068	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGAGTCTAAAGCTCCT	-8	True	NA	24	True	AATAAA	-21	NA	46936744	47162247	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46936852_46987207_46987311_47052387_47052519_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47161126_47161191_47161463
H1_mix_00012538	chr11	+	1708	9	FSM	ENSG00000149179.14	ENST00000378615.7	1651	9	-59	2	-11	0	multi-exon	FALSE	canonical	3	33	junction_8	103.313842247784	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGTGAGTCTAAAGCTC	-34	True	NA	22	True	AATAAA	-19	NA	46936718	47162245	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46936852_46987207_46987311_47052387_47052519_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47161126_47161191_47161445
H1_mix_00012539	chr11	+	2333	10	FSM	ENSG00000134574.12	ENST00000256996.9	1815	10	-546	28	-37	0	multi-exon	FALSE	canonical	3	160	junction_5	56.8671833592088	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATGGCCAATAAAACCATA	NA	False	NA	-14	True	NA	NA	NA	47214427	47239189	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47215264_47216335_47216473_47216857_47217050_47232813_47232960_47234572_47234673_47234756_47234935_47235269_47235413_47237836_47238002_47238137_47238184_47238799
H1_mix_00012540	chr11	+	1609	9	FSM	ENSG00000134574.12	ENST00000378601.7	1591	9	-18	0	0	0	multi-exon	FALSE	canonical	2	16	junction_5	86.42039328191	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATGGCCAATAAAACCATA	-4	True	NA	-14	True	NA	NA	NA	47214973	47239189	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47215264_47216335_47216473_47216857_47217050_47232813_47232960_47234572_47234673_47235269_47235413_47237836_47238002_47238137_47238184_47238799
H1_mix_00012541	chr11	+	897	3	FSM	ENSG00000134574.12	ENST00000615695.1	897	3	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	7.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGGAGTGTTTGTTGA	-23	True	NA	NA	False	AATAAA	-10	NA	47215057	47217411	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47215264_47216335_47216473_47216857
H1_mix_00012543	chr11	+	660	3	FSM	ENSG00000134574.12	ENST00000614884.1	660	3	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_1	34.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGCGTGGATCTTCCA	2892	False	NA	14	True	AATAAA	-15	NA	47237805	47239217	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47238002_47238137_47238184_47238799
H1_mix_00012544	chr11	+	872	2	FSM	ENSG00000025434.19	ENST00000487913.5	852	2	-21	1	-10	-1	multi-exon	FALSE	canonical	3	10	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGAACTGAGATCACACA	6	True	NA	NA	False	NA	NA	NA	47248905	47262018	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47249000_47261240
H1_mix_00012545	chr11	+	1511	9	FSM	ENSG00000025434.19	ENST00000395397.7	1501	9	-10	0	-10	0	multi-exon	TRUE	canonical	3	32	junction_1	31.3876966341909	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCCCGTGGCATTAAAAG	6	True	NA	-7	True	NA	NA	NA	47248905	47268812	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47249000_47259790_47259980_47260408_47260676_47261240_47261450_47261546_47261727_47261918_47262019_47267912_47268027_47268260_47268356_47268549
H1_mix_00012547	chr11	+	1852	10	FSM	ENSG00000025434.19	ENST00000441012.7	1852	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	34.8800413410107	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTGGTATGGCCATAAA	13	True	NA	2	True	AAGAAA	-16	NA	47257995	47269033	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47258130_47259179_47259260_47259790_47259980_47260408_47260676_47261240_47261450_47261546_47261727_47261918_47262019_47267912_47268027_47268260_47268356_47268549
H1_mix_00012550	chr11	+	5999	33	NIC	ENSG00000110514.19	novel	5823	33	NA	NA	-164	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_13	22.5338070671047	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGGCTCCCTGGCTGCCT	304	False	NA	15	True	AATAAA	-15	NA	47269983	47330031	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_47270247_47273826_47273977_47274562_47275160_47275898_47276203_47276731_47276864_47278164_47278279_47278998_47279080_47281574_47281754_47282380_47282617_47282812_47282970_47284177_47284282_47284374_47284566_47284940_47285195_47285450_47285591_47286432_47286535_47289390_47289494_47289866_47290054_47290148_47290300_47290609_47290817_47293882_47293984_47295495_47295580_47295896_47296056_47308590_47308700_47309280_47309402_47309506_47309613_47311731_47311843_47315219_47315328_47323670_47323836_47324264_47324338_47324470_47324578_47326737_47326808_47328657_47328705_47329045
H1_mix_00012552	chr11	+	6006	33	FSM	ENSG00000110514.19	ENST00000402192.6	5823	33	-183	0	-175	0	multi-exon	FALSE	canonical	3	25	junction_21	25.38837009218	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCAGGCTCCCTGGCTGCC	293	False	NA	14	True	AATAAA	-14	NA	47269972	47330030	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47270247_47273826_47273977_47274562_47275160_47275898_47276203_47276731_47276864_47278164_47278279_47278998_47279080_47281574_47281754_47282380_47282617_47282812_47282970_47284177_47284282_47284374_47284566_47284940_47285195_47285450_47285591_47286432_47286535_47289390_47289494_47289866_47290054_47290148_47290300_47290609_47290817_47293882_47293984_47295495_47295577_47295896_47296056_47308590_47308700_47309280_47309402_47309506_47309613_47311731_47311843_47315219_47315328_47323670_47323836_47324264_47324338_47324470_47324578_47326737_47326808_47328657_47328705_47329045
H1_mix_00012553	chr11	+	5997	33	NIC	ENSG00000110514.19	novel	5823	33	NA	NA	-175	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_21	23.6536697734199	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCAGGCTCCCTGGCTGCC	293	False	NA	14	True	AATAAA	-14	NA	47269972	47330030	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_47270247_47273826_47273977_47274562_47275160_47275898_47276203_47276731_47276864_47278164_47278279_47278998_47279080_47281574_47281754_47282380_47282617_47282812_47282970_47284177_47284282_47284374_47284566_47284940_47285195_47285450_47285591_47286432_47286535_47289390_47289494_47289866_47290054_47290148_47290300_47290609_47290817_47293882_47293984_47295495_47295568_47295896_47296056_47308590_47308700_47309280_47309402_47309506_47309613_47311731_47311843_47315219_47315328_47323670_47323836_47324264_47324338_47324470_47324578_47326737_47326808_47328657_47328705_47329045
H1_mix_00012559	chr11	+	2394	10	NIC	ENSG00000165915.14	novel	2330	10	NA	NA	-81	0	intron_retention	FALSE	canonical	3	147	junction_1	30.1887069065795	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGCCTTGGTTCTG	-3	True	NA	24	True	AATAAA	-12	NA	47408502	47416494	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_47408663_47410086_47410396_47411925_47412040_47412345_47412468_47413399_47413508_47413596_47413687_47414424_47414476_47414776_47414910_47415059_47415160_47415287
H1_mix_00012562	chr11	+	1611	3	FSM	ENSG00000110536.14	ENST00000534775.1	1611	3	0	0	0	0	multi-exon	FALSE	canonical	3	814	junction_1	45.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAACCAAAGTTACATTT	3	True	NA	NA	False	NA	NA	NA	47565457	47572360	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47565987_47569699_47569892_47571470
H1_mix_00012563	chr11	+	928	3	FSM	ENSG00000110536.14	ENST00000326656.12	928	3	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_2	250.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGTTCCCCTGAGGGAA	-4	True	NA	NA	False	NA	NA	NA	47565598	47572119	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47565797_47565905_47565987_47571470
H1_mix_00012564	chr11	+	2462	4	FSM	ENSG00000110536.14	ENST00000326674.10	2462	4	0	0	0	0	multi-exon	FALSE	canonical	3	814	junction_2	39.668067202166	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCAGTGTCTTGCCACC	-4	True	NA	20	True	AATAAA	-21	NA	47565598	47573461	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47565797_47565905_47565987_47569699_47569892_47571470
H1_mix_00012565	chr11	+	2164	2	FSM	ENSG00000110536.14	ENST00000426530.2	1014	2	476	-1626	8	92	multi-exon	FALSE	canonical	3	329	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCACTCCCAGTCAACGG	303	False	NA	112	True	NA	NA	NA	47565905	47573553	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47565987_47571470
H1_mix_00012567	chr11	+	1265	4	FSM	ENSG00000213619.11	ENST00000534716.2	1263	4	-2	0	0	0	multi-exon	FALSE	canonical	3	1042	junction_2	42.6249796350554	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCAGGTAGCCTTGTGAG	3	True	NA	NA	False	NA	NA	NA	47579071	47581848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47579159_47579268_47579335_47580524_47580623_47580834
H1_mix_00012568	chr11	+	896	7	FSM	ENSG00000213619.11	ENST00000263774.9	894	7	-2	0	0	0	multi-exon	FALSE	canonical	3	1042	junction_2	40.1746188532013	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTTTGTGTGTGCTTGTA	3	True	NA	28	True	AATAAA	-17	NA	47579071	47584562	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47579159_47579268_47579335_47580524_47580623_47580834_47580985_47582087_47582214_47582348_47582469_47584313
H1_mix_00012569	chr11	+	2060	5	FSM	ENSG00000213619.11	ENST00000531351.2	2049	5	-11	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	473.89048049101	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATTCCTACTTAGACT	59	False	NA	6	True	NA	NA	NA	47579127	47584540	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47579159_47579268_47579339_47580524_47580623_47580834_47582469_47584313
H1_mix_00012571	chr11	+	3468	9	FSM	ENSG00000149177.14	ENST00000440289.6	3158	9	-141	-169	-120	169	multi-exon	FALSE	canonical	3	38	junction_8	11.2354072022335	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTTGCAAATCTGCATTT	NA	False	NA	NA	False	ACTAAA	-29	NA	47980438	48132889	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47981009_48110057_48110077_48112746_48112984_48121002_48121267_48123612_48123871_48124967_48125187_48127779_48128044_48130458_48130717_48131510
H1_mix_00012572	chr11	+	7901	25	FSM	ENSG00000149177.14	ENST00000418331.7	7845	25	-56	0	-56	0	multi-exon	FALSE	canonical	0	0	junction_16	20.2601140722905	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGCCTTTGCTTCTTTCT	NA	False	NA	3	True	TATAAA	-15	NA	47980502	48170839	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47981009_48110057_48110077_48112746_48112984_48121002_48121267_48123612_48123871_48124967_48125187_48127779_48128044_48130458_48130717_48136038_48136297_48137002_48137282_48139485_48139777_48142918_48143051_48144674_48144886_48144999_48145125_48146875_48146964_48149446_48149489_48149989_48149999_48150095_48150184_48153795_48153887_48155800_48155875_48155984_48156120_48159929_48160050_48163457_48163619_48164379_48164516_48167203
H1_mix_00012573	chr11	+	2545	2	NNC	ENSG00000149177.14	novel	546	3	NA	NA	3	-137337	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGCTGGTGACTGAT	10	True	NA	NA	False	AATAAA	-6	NA	47980561	47983810	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_47981009_47981712
H1_mix_00012577	chr11	+	2009	7	ISM	ENSG00000149131.17	ENST00000278407.9	1830	8	343	4	-156	0	3prime_fragment	FALSE	canonical	3	480	junction_2	77.9650919037203	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGACTTTCTCTGCTTTGCC	40	False	NA	13	True	AATAAA	-13	NA	57598027	57614844	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_57598322_57599878_57600378_57602034_57602170_57606009_57606214_57606407_57606548_57611716_57611937_57614327
H1_mix_00012578	chr11	+	2084	8	FSM	ENSG00000149131.17	ENST00000676670.1	2084	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	218.601305147625	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTGTGTTGTAGAATAAA	23	False	NA	NA	False	NA	NA	NA	57598183	57619159	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57598322_57599878_57600378_57602034_57602170_57606009_57606214_57606407_57606548_57611716_57611937_57614327_57614597_57618680
H1_mix_00012579	chr11	+	2868	6	FSM	ENSG00000149131.17	ENST00000676741.1	2849	6	-19	0	-19	0	multi-exon	FALSE	canonical	3	480	junction_1	84.3502222877925	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTCTCTGCTTTGCCT	442	False	NA	14	True	AATAAA	-14	NA	57598726	57614845	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57600378_57602034_57602170_57606009_57606214_57606407_57606548_57611716_57611937_57614327
H1_mix_00012580	chr11	+	3594	2	FSM	ENSG00000254602.2	ENST00000530595.1	2790	2	21	-825	21	825	multi-exon	FALSE	canonical	2	13	junction_1	0	488	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTATAATAATAATAAAATTT	30	False	NA	NA	False	NA	NA	NA	57638396	57653615	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57638673_57650297
H1_mix_00012583	chr11	+	1994	3	FSM	ENSG00000172409.7	ENST00000533682.2	1828	3	-167	1	-156	0	multi-exon	FALSE	canonical	3	165	junction_2	26	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTTGGTATAATTTATT	9054	False	NA	32	True	AATAAA	-18	NA	57657594	57661864	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57657861_57659454_57660083_57660764
H1_mix_00012586	chr11	+	4452	12	FSM	ENSG00000156599.11	ENST00000287169.8	4443	12	-9	0	0	0	multi-exon	FALSE	canonical	3	348	junction_2	39.3101673387223	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCGCCCCCTGACTTGTG	42	True	NA	12	True	AATAAA	-18	NA	57668104	57701182	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57668188_57672020_57673195_57682421_57682544_57688507_57688666_57690030_57690204_57690334_57690438_57692610_57692703_57693782_57693916_57695919_57696044_57696760_57696874_57698558_57699419_57699865
H1_mix_00012593	chr11	+	1950	8	FSM	ENSG00000213593.10	ENST00000529403.1	1697	8	-253	0	-232	0	multi-exon	FALSE	canonical	3	53	junction_2	265.028223371915	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATTGCGCGTTTGTGTGT	NA	False	NA	21	True	AATAAA	-18	NA	57712360	57740969	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57712808_57737607_57737669_57737835_57738027_57738353_57738431_57738663_57738771_57738973_57739040_57739130_57739261_57740098
H1_mix_00012598	chr11	+	6044	19	FSM	ENSG00000198561.16	ENST00000534579.5	6024	19	-20	0	-8	0	multi-exon	FALSE	canonical	3	153	junction_2	250.798281050285	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	8496	False	NA	12	True	ATTAAA	-18	NA	57761780	57819178	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57762047_57789036_57789156_57791491_57791674_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
H1_mix_00012599	chr11	+	6151	19	FSM	ENSG00000198561.16	ENST00000358694.10	6135	19	-16	0	-8	0	multi-exon	FALSE	canonical	3	244	junction_2	237.063705820364	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	8496	False	NA	12	True	ATTAAA	-18	NA	57761780	57819178	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57762047_57789036_57789156_57791384_57791674_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
H1_mix_00012600	chr11	+	5743	17	FSM	ENSG00000198561.16	ENST00000529986.5	5727	17	-16	0	-8	0	multi-exon	FALSE	canonical	3	184	junction_1	199.86236475072	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	8496	False	NA	12	True	ATTAAA	-18	NA	57761780	57819178	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57762047_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
H1_mix_00012603	chr11	+	5335	20	FSM	ENSG00000198561.16	ENST00000673826.1	5335	20	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	422.527030393018	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAAAGTGTGTATGTGG	37	True	NA	2	True	AATAAA	-2	NA	57761863	57818432	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57762047_57762600_57762668_57789036_57789156_57791384_57791674_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806460_57806479_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
H1_mix_00012605	chr11	+	5926	16	FSM	ENSG00000198561.16	ENST00000681984.1	5926	16	0	0	0	0	multi-exon	FALSE	canonical	3	829	junction_1	67.6495544865021	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATAGCTGCTCCTGATGA	693	False	NA	-3	True	ATTAAA	-3	NA	57793545	57819163	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
H1_mix_00012606	chr11	+	6410	13	FSM	ENSG00000198561.16	ENST00000683906.1	6410	13	0	0	0	0	multi-exon	FALSE	canonical	3	860	junction_4	57.5723578541724	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATAGCTGCTCCTGATGA	7171	False	NA	-3	True	ATTAAA	-3	NA	57800023	57819163	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
H1_mix_00012608	chr11	+	3671	9	FSM	ENSG00000198561.16	ENST00000683510.1	3654	9	-17	0	-16	0	multi-exon	FALSE	canonical	3	860	junction_1	66.4698004735985	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGGGGGGTCTGTGTCA	NA	False	NA	15	True	AATAAA	-15	NA	57805524	57818445	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57806036_57806914_57806984_57808164_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
H1_mix_00012609	chr11	+	3555	10	FSM	ENSG00000198561.16	ENST00000683201.1	3555	10	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_9	288.357417105924	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGGGGGGTCTGTGTCA	NA	False	NA	15	True	AATAAA	-15	NA	57805540	57818445	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816299
H1_mix_00012613	chr11	+	3625	4	FSM	ENSG00000189057.11	ENST00000343597.4	3506	4	-121	2	-69	0	multi-exon	FALSE	canonical	3	60	junction_3	16.0485374896143	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATTTAGAGTATTGGAG	NA	False	NA	13	True	AATAAA	-23	NA	59107115	59127410	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_59107297_59108667_59108713_59109539_59109707_59124178
H1_mix_00012614	chr11	+	3405	2	FSM	ENSG00000189057.11	ENST00000620384.1	3405	2	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATTTAGAGTATTGGAG	2297	False	NA	13	True	AATAAA	-23	NA	59109533	59127410	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_59109707_59124178
H1_mix_00012617	chr11	+	2510	7	FSM	ENSG00000166801.17	ENST00000675806.2	2500	7	-10	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	43.8963425456938	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCAGTCTACTGGATTT	-21	True	NA	NA	False	NA	NA	NA	59142848	59153504	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_59142947_59143082_59143305_59143496_59143696_59144808_59144897_59145826_59145857_59148835_59148954_59151749
H1_mix_00012622	chr11	+	4439	3	FSM	ENSG00000166801.17	ENST00000420244.6	4439	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	37	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGTATTTGTCAGCCTC	37	True	NA	18	True	ATTAAA	-15	NA	59144861	59155036	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_59145857_59148796_59148954_59151749
H1_mix_00012625	chr11	+	6154	11	FSM	ENSG00000166900.17	ENST00000337979.9	6154	11	0	0	0	0	multi-exon	FALSE	canonical	3	570	junction_6	63.0318173623449	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGTACTGTTGTTTTTT	-1	True	NA	7	True	AATAAA	-16	NA	59755375	59805878	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_59755636_59773210_59773295_59787036_59787137_59788872_59788948_59790518_59790587_59792106_59792216_59793098_59793173_59793379_59793515_59795371_59795483_59797282_59797397_59800854
H1_mix_00012628	chr11	+	534	4	FSM	ENSG00000166900.17	ENST00000530221.1	534	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	313.778407301855	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTATTTTTCCATATCC	384	False	NA	23	True	AATAGA	-27	NA	59793478	59799947	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_59793515_59795371_59795483_59797282_59797397_59799674
H1_mix_00012634	chr11	+	3480	11	FSM	ENSG00000006118.15	ENST00000005286.8	3480	11	0	0	0	0	multi-exon	TRUE	canonical	3	144	junction_5	45.6321158834433	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGACTGCTGCCGTCTG	7	True	NA	23	True	AATAAA	-18	NA	60924480	60937159	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_60924734_60927203_60927419_60927640_60927860_60928628_60928961_60930509_60930660_60931685_60931885_60931983_60932128_60933541_60933745_60934487_60934765_60935251_60935444_60935863
H1_mix_00012635	chr11	+	2477	7	FSM	ENSG00000006118.15	ENST00000534983.5	2477	7	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_4	56.8636282892872	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCGGCCGCCGCCTCACGC	2575	False	NA	NA	False	NA	NA	NA	60927048	60934607	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_60927419_60927640_60927860_60928628_60928961_60930509_60930660_60931688_60931885_60931983_60932128_60933541
H1_mix_00012637	chr11	+	2013	2	FSM	ENSG00000006118.15	ENST00000540112.1	2013	2	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGAGAAGGAAACCAGAGCT	2891	False	NA	6	True	AATAAA	-1	NA	60934642	60937142	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_60934765_60935251
H1_mix_00012645	chr11	+	585	3	FSM	ENSG00000149476.16	ENST00000534134.1	585	3	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	7.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGGGACACCTCCAGGGAA	1196	False	NA	NA	False	AGTAAA	-32	NA	61342400	61343159	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_61342496_61342573_61342659_61342754
H1_mix_00012648	chr11	+	970	5	FSM	ENSG00000149483.13	ENST00000451389.7	1233	5	152	111	-39	-111	multi-exon	FALSE	canonical	3	13	junction_4	74.8698871376203	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCTTAATAAAGGTTATAAA	66	False	NA	-21	True	NA	NA	NA	61362304	61373381	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_61362421_61364251_61364519_61366044_61366217_61367922_61367999_61373042
H1_mix_00012649	chr11	+	1475	5	FSM	ENSG00000149483.13	ENST00000278826.11	1475	5	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_4	25.8396497654283	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAAATTCTTATGTCC	-5	True	NA	NA	False	AATAAA	-33	NA	61362373	61369509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_61362421_61364251_61364519_61366044_61366217_61367922_61367999_61368596
H1_mix_00012655	chr11	+	1065	5	NIC	ENSG00000187049.11	novel	1090	5	NA	NA	2	-10	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_4	160.760691712869	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGTTGTGGGGGTTGC	2	True	NA	8	True	AATAAA	-7	NA	61392633	61398836	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_61392680_61393230_61393333_61393883_61393977_61397727_61397976_61398260
H1_mix_00012660	chr11	+	978	2	FSM	ENSG00000167985.7	ENST00000542074.1	835	2	-45	-98	18	62	multi-exon	FALSE	canonical	3	85	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTTATAGAGTTTTACA	8	True	NA	82	True	NA	NA	NA	61430059	61446795	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_61430183_61445940
H1_mix_00012678	chr11	+	2114	10	FSM	ENSG00000134824.14	ENST00000521849.5	1703	10	-846	435	42	0	multi-exon	FALSE	canonical	3	2609	junction_7	114.114951790825	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGCGCGGGGCTGCGGGG	NA	False	NA	NA	False	NA	NA	NA	61827433	61863786	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_61828598_61837777_61837889_61840333_61840532_61840623_61840726_61848158_61848285_61857010_61857072_61857453_61857531_61862971_61863070_61863281_61863379_61863706
H1_mix_00012679	chr11	+	3111	12	FSM	ENSG00000134824.14	ENST00000278840.9	3091	12	-20	0	0	0	multi-exon	FALSE	canonical	3	2541	junction_10	125.104386166179	877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTGTTTCCTGCACG	173	False	NA	20	True	AATAAA	-20	NA	61828279	61867354	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_61828598_61837777_61837889_61840333_61840532_61840623_61840726_61848158_61848285_61857010_61857072_61857453_61857531_61862971_61863070_61863281_61863379_61863706_61863787_61865151_61865278_61865637
H1_mix_00012682	chr11	+	4486	7	ISM	ENSG00000149503.13_ENSG00000289194.1	ENST00000394818.8	4114	19	21212	-2305	-7259	691	3prime_fragment	FALSE	canonical	0	0	junction_4	1.10554159678513	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTGTTGTTGTTGTTG	7621	False	NA	14	True	AATAAA	-16	NA	62145222	62155474	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_62145290_62145628_62145752_62146657_62146903_62148475_62148555_62148738_62148847_62150056_62150208_62151761
H1_mix_00012687	chr11	+	641	4	FSM	ENSG00000162174.12	ENST00000534571.5	639	4	-2	0	0	0	multi-exon	FALSE	canonical	3	234	junction_1	62.0017920887955	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACCTGGTTATCTACAG	28	True	NA	15	True	ATTAAA	-16	NA	62337492	62357201	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62337575_62337966_62338168_62356324_62356468_62356986
H1_mix_00012701	chr11	+	888	7	FSM	ENSG00000168002.12	ENST00000527435.5	868	7	-20	0	0	0	multi-exon	FALSE	canonical	3	1210	junction_2	43.2335389355173	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGTGTTATCTTCTTTT	9	False	NA	20	True	TATAAA	-17	NA	62761616	62766710	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62761905_62762866_62763027_62765181_62765233_62765339_62765406_62765652_62765725_62766242_62766277_62766493
H1_mix_00012705	chr11	+	1926	11	NNC	ENSG00000162227.8	novel	2023	11	NA	NA	63	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	59.7414429018918	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACGTCTCCACCTTCGTGG	28	False	NA	33	True	AATAAA	-16	NA	62771465	62787342	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_62771491_62775770_62775931_62776383_62776471_62777977_62778129_62778284_62778336_62778895_62778964_62781893_62781969_62782112_62782334_62782692_62782826_62786259_62786389_62786516
H1_mix_00012707	chr11	+	810	4	FSM	ENSG00000185475.11	ENST00000533861.5	797	4	-13	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	183.637928786209	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTGAGTTTTTGATGTTA	-8	True	NA	25	True	NA	NA	NA	62787401	62790246	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62787528_62789022_62789211_62789291_62789427_62789885
H1_mix_00012711	chr11	+	2161	12	FSM	ENSG00000168003.18	ENST00000377890.6	2161	12	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	1099.56416610032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTATGAGTGAACCCCCAA	-6	True	NA	16	True	TTTAAA	-23	NA	62856101	62888793	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62856382_62870744_62870838_62871576_62871670_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
H1_mix_00012712	chr11	+	2231	12	FSM	ENSG00000168003.18	ENST00000377891.6	2222	12	-9	0	0	0	multi-exon	FALSE	canonical	3	210	junction_2	999.829712773858	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTCCCTCTGCTTCTCTC	-6	True	NA	31	True	AATAAA	-21	NA	62856101	62888860	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62856382_62871576_62871670_62876783_62876880_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
H1_mix_00012713	chr11	+	2280	12	FSM	ENSG00000168003.18	ENST00000680725.1	2197	12	-118	35	-11	0	multi-exon	FALSE	canonical	3	47	junction_1	1089.74353643718	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGCATGGTGAAGTCTT	NA	False	NA	16	True	AATAAA	-6	NA	62855992	62888845	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62856382_62870744_62870796_62871576_62871670_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
H1_mix_00012714	chr11	+	1993	10	FSM	ENSG00000168003.18	ENST00000377889.6	1993	10	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	815.77693029406	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGAAGTCTTCCCTCTGC	36	False	NA	24	True	AATAAA	-14	NA	62856143	62888853	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62856382_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
H1_mix_00012715	chr11	+	2108	11	FSM	ENSG00000168003.18	ENST00000535296.5	2084	11	-24	0	0	0	multi-exon	FALSE	canonical	3	911	junction_2	712.865548332924	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCATAGCAGGAATTTCT	36	False	NA	46	True	AATAAA	-36	NA	62856143	62888875	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62856382_62871576_62871670_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
H1_mix_00012716	chr11	+	2173	12	NIC	ENSG00000168003.18	novel	2334	13	NA	NA	2	0	intron_retention	FALSE	canonical	3	124	junction_2	1014.87149371747	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGGTGAAGTCTTCCCT	38	False	NA	20	True	AATAAA	-10	NA	62856145	62888849	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_62856382_62871576_62871670_62876786_62876880_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
H1_mix_00012717	chr11	+	1975	8	FSM	ENSG00000168003.18	ENST00000680297.1	1975	8	0	0	0	0	multi-exon	FALSE	canonical	3	2410	junction_2	270.120305774736	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCCAAATAGGGTGTTTT	6855	False	NA	-24	True	TTTAAA	-35	NA	62880862	62888805	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134
H1_mix_00012718	chr11	+	1911	9	FSM	ENSG00000168003.18	ENST00000338663.12	1885	9	-33	7	0	0	multi-exon	FALSE	canonical	3	2410	junction_2	263.230768528301	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGAAGTCTTCCCTCTGC	6855	False	NA	24	True	AATAAA	-14	NA	62880862	62888853	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
H1_mix_00012719	chr11	+	1563	8	FSM	ENSG00000168003.18	ENST00000679594.1	1512	8	-51	0	-50	0	multi-exon	FALSE	canonical	3	2410	junction_1	265.368438521361	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGCATGGTGAAGTCTT	723	False	NA	16	True	AATAAA	-6	NA	62881647	62888845	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
H1_mix_00012722	chr11	+	1714	9	FSM	ENSG00000133317.16	ENST00000394618.9	1699	9	-20	5	12	0	multi-exon	TRUE	canonical	3	15	junction_3	3.96862696659689	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTATTTCGTTCTCAT	7	True	NA	3	True	AATAAA	-13	NA	63506063	63516767	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_63506528_63508552_63508642_63508777_63508992_63509777_63509898_63510462_63510502_63511078_63511106_63511751_63511841_63515562_63515714_63516246
H1_mix_00012723	chr11	+	805	5	NNC	ENSG00000133321.11	novel	758	4	NA	NA	-7265	-4	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	17.4928556845359	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAGAAAGGACTTCTACC	8607	False	NA	0	True	AATAAA	-14	NA	63529542	63546453	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_63529602_63536814_63536878_63539515_63539625_63544620_63544890_63546148
H1_mix_00012724	chr11	+	813	4	NNC	ENSG00000133321.11	novel	758	4	NA	NA	-7331	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	8.83176086632785	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGACTTCTACCATGTT	8541	False	NA	5	True	AATAAA	-19	NA	63529476	63546458	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_63529602_63539515_63539625_63544620_63544890_63546148
H1_mix_00012725	chr11	+	751	4	FSM	ENSG00000133321.11	ENST00000255688.8	758	4	7	0	-1	0	multi-exon	FALSE	canonical	3	21	junction_1	13.8884444373331	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGACTTCTACCATGTT	4	True	NA	5	True	AATAAA	-19	NA	63536814	63546458	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_63536878_63539515_63539625_63544620_63544890_63546148
H1_mix_00012727	chr11	+	4895	8	FSM	ENSG00000133318.14	ENST00000339997.8	4886	8	-9	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	1035.03358912271	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGTGGCATCATTCTGC	4	True	NA	44	True	AATAAA	-21	NA	63681473	63759891	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_63681779_63718701_63721033_63749990_63750199_63752506_63752646_63753068_63753139_63753661_63753709_63756111_63756171_63758155
H1_mix_00012728	chr11	+	2524	6	FSM	ENSG00000133318.14	ENST00000341307.6	2524	6	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_5	927.957197288754	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAAACAATGACTGTGGCA	-5	True	NA	35	True	AATAAA	-12	NA	63681445	63759882	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_63681779_63749990_63750199_63752506_63752646_63753068_63753139_63753661_63753709_63758155
H1_mix_00012729	chr11	+	2549	7	FSM	ENSG00000133318.14	ENST00000537981.5	2532	7	-17	0	0	0	multi-exon	FALSE	canonical	3	2108	junction_6	115.511062481286	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAATGACTGTGGCATCA	13	False	NA	38	True	AATAAA	-15	NA	63681482	63759885	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_63681779_63749990_63750199_63752506_63752646_63753068_63753139_63753661_63753709_63756111_63756171_63758155
H1_mix_00012742	chr11	+	4811	7	FSM	ENSG00000110583.13	ENST00000338447.10	4707	7	-104	0	-104	0	multi-exon	TRUE	canonical	3	140	junction_2	24.6672297233034	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGAGATGGCTTCCTG	NA	False	NA	14	True	AATAAA	-15	NA	63938854	63957319	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_63939103_63945839_63947004_63952237_63952334_63952406_63952566_63952755_63952840_63953971_63954050_63954337
H1_mix_00012747	chr11	+	2900	6	FSM	ENSG00000167770.13	ENST00000301453.7	2493	6	-406	-1	-406	0	multi-exon	FALSE	canonical	3	1968	junction_5	151.181215764393	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGCCGTCCGCCTGTG	9212	False	NA	26	True	AATAAA	-18	NA	63985446	63998412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_63986515_63988336_63988399_63988653_63988753_63996529_63996942_63997049_63997245_63997348
H1_mix_00012750	chr11	+	538	4	FSM	ENSG00000167770.13	ENST00000536443.1	553	4	0	15	0	-15	multi-exon	FALSE	canonical	3	33	junction_3	1088.23741282253	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAATGTGACAATGGGT	34	False	NA	NA	False	AATAAA	-22	NA	63986468	63990617	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_63986515_63988336_63988399_63988653_63988753_63990286
H1_mix_00012751	chr11	+	1259	7	FSM	ENSG00000167770.13	ENST00000543988.1	1259	7	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	713.030153640083	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGCTTCGTTGGGTTC	5	True	NA	NA	False	NA	NA	NA	63986841	63997850	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_63987039_63988336_63988399_63988653_63988753_63996529_63996649_63996856_63996942_63997049_63997245_63997348
H1_mix_00012757	chr11	+	1297	5	NIC	ENSG00000149761.9	novel	1110	6	NA	NA	-7	0	intron_retention	TRUE	canonical	3	265	junction_2	48.8722825331496	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTCTGAAAATAATAAACGA	9	False	NA	11	True	NA	NA	NA	64226260	64229983	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_64227133_64227567_64227667_64229246_64229345_64229477_64229572_64229849
H1_mix_00012758	chr11	+	960	6	NIC	ENSG00000149761.9	novel	1110	6	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	113.92032303325	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTCTGAAAATAATAAACGA	9	False	NA	11	True	NA	NA	NA	64226260	64229983	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_64226298_64226634_64227133_64227567_64227667_64229246_64229345_64229477_64229572_64229849
H1_mix_00012760	chr11	+	1007	5	FSM	ENSG00000149761.9	ENST00000441250.6	986	5	-21	0	1	0	multi-exon	FALSE	canonical	3	55	junction_2	125.835954718832	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTGGATTCCGTTGGCA	-18	True	NA	35	True	AATAAA	-8	NA	64226268	64230007	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_64226428_64226634_64227133_64229246_64229345_64229477_64229572_64229849
H1_mix_00012771	chr11	+	637	4	FSM	ENSG00000173486.14	ENST00000536642.5	637	4	0	0	0	0	multi-exon	FALSE	canonical	3	626	junction_1	180.913116040699	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTAGTGGCCCCACTCT	14	True	NA	NA	False	NA	NA	NA	64241002	64243669	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_64241133_64242383_64242559_64243198_64243312_64243450
H1_mix_00012773	chr11	+	595	6	FSM	ENSG00000173486.14	ENST00000309366.9	574	6	-21	0	0	0	multi-exon	FALSE	canonical	3	626	junction_1	159.457831416334	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTAAGCCTGTGTGTGTT	-10	True	NA	18	True	AAAACA	-39	NA	64241073	64244132	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_64241133_64242383_64242559_64243198_64243312_64243450_64243498_64243840_64243877_64243967
H1_mix_00012775	chr11	+	530	6	NNC	ENSG00000173486.14	novel	574	6	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	110	junction_1	357.319688794222	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAACAAAAAAACACTTA	-9	True	NA	-11	True	AAAACA	-10	NA	64241074	64244103	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_64241133_64242418_64242559_64243198_64243312_64243450_64243498_64243840_64243877_64243967
H1_mix_00012776	chr11	+	613	6	FSM	ENSG00000173486.14	ENST00000449942.6	613	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	380.521747078928	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAAGGAGTAAGCCTGTG	72	False	NA	12	True	AAAACA	-33	NA	64241155	64244126	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_64241239_64242383_64242559_64243198_64243312_64243450_64243498_64243840_64243877_64243967
H1_mix_00012780	chr11	+	4486	32	FSM	ENSG00000149782.13	ENST00000540288.5	4469	32	-17	0	0	0	multi-exon	FALSE	canonical	3	8	junction_31	100.343758785284	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCCTCTGCTGCTCCC	9	True	NA	NA	False	NA	NA	NA	64251529	64269150	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_64251749_64254414_64254493_64254747_64254817_64254897_64255039_64255233_64255314_64255395_64255450_64255540_64255617_64255720_64255822_64256375_64256543_64256617_64256765_64258472_64258714_64258884_64258970_64259057_64259245_64260028_64260235_64261399_64261497_64261580_64261666_64261951_64262077_64262406_64262562_64262646_64262809_64263497_64263598_64263690_64263796_64264020_64264113_64264950_64265105_64265191_64265228_64265309_64265503_64265885_64266040_64266125_64266203_64266314_64266405_64266494_64266553_64267184_64267272_64267352_64267571_64268503
H1_mix_00012783	chr11	+	1964	8	NIC	ENSG00000173264.15	novel	1485	7	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	60.9027327559516	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTGTGCACCTGTCTGT	6	True	NA	12	True	AATAAA	-16	NA	64284811	64289491	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_64285381_64286509_64286882_64286964_64287015_64287720_64287947_64288064_64288215_64288339_64288469_64288602_64288722_64289142
H1_mix_00012785	chr11	+	2166	7	FSM	ENSG00000173264.15	ENST00000438980.7	2166	7	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_3	13.2245562832516	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGCACCTGTCTGTCAT	-30	True	NA	15	True	AATAAA	-19	NA	64285847	64289494	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_64286882_64286964_64287015_64287720_64287947_64288064_64288215_64288339_64288469_64288602_64288722_64289036
H1_mix_00012786	chr11	+	2206	7	FSM	ENSG00000173264.15	ENST00000313074.7	1485	7	-721	0	0	0	multi-exon	FALSE	canonical	3	65	junction_6	47.1616605117146	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTGTGCACCTGTCTGT	143	False	NA	12	True	AATAAA	-16	NA	64285698	64289491	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_64286882_64286964_64287015_64287720_64287947_64288064_64288215_64288339_64288469_64288602_64288722_64289142
H1_mix_00012789	chr11	+	2305	7	FSM	ENSG00000173153.17	ENST00000406310.6	2293	7	-12	0	-12	0	multi-exon	FALSE	canonical	3	51	junction_4	89.0781492099306	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACACTGTGTTTGGTGT	1984	False	NA	15	True	AATATA	-14	NA	64305484	64316738	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_64305737_64307167_64307505_64313950_64314068_64314238_64314368_64314743_64314912_64315000_64315271_64315706
H1_mix_00012791	chr11	+	2510	7	FSM	ENSG00000173153.17	ENST00000405666.5	2283	7	0	-227	0	227	multi-exon	FALSE	canonical	3	44	junction_1	87.6863095864394	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGGCAGGGAGGGACAGAG	17	False	NA	NA	False	NA	NA	NA	64306226	64316970	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_64306449_64307167_64307505_64313950_64314068_64314238_64314368_64314740_64314912_64315000_64315271_64315706
H1_mix_00012794	chr11	+	596	5	FSM	ENSG00000126432.14	ENST00000352435.8	596	5	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_2	1429.73467818333	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGCTGGGGCCCTGC	4	True	NA	-45	True	NA	NA	NA	64318181	64321740	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_64318387_64319733_64319869_64320864_64320904_64321006_64321069_64321585
H1_mix_00012795	chr11	+	463	4	FSM	ENSG00000126432.14	ENST00000347941.4	463	4	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_1	1533.21803914367	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTGGGGCCCTGCAA	4	True	NA	-43	True	NA	NA	NA	64318181	64321742	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_64318387_64320864_64320904_64321006_64321069_64321585
H1_mix_00012796	chr11	+	821	7	NNC	ENSG00000126432.14	novel	860	6	NA	NA	0	17076	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1260.5297387298	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGTGTCACTGACAAGCC	4	True	NA	NA	False	NA	NA	NA	64318181	64338887	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_64318387_64319733_64319869_64320660_64320793_64320864_64320904_64321006_64321069_64321585_64321809_64338862
H1_mix_00012801	chr11	+	779	2	FSM	ENSG00000168071.22	ENST00000472524.1	779	2	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTCTTGCTCTGTCTGTT	29	False	NA	18	True	AATAAA	-18	NA	64355342	64357531	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_64355629_64357038
H1_mix_00012807	chr11	+	1824	3	FSM	ENSG00000213465.8	ENST00000524585.1	1228	3	-481	-115	-470	115	multi-exon	FALSE	canonical	3	3424	junction_1	32.5	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCACGTTTTTCCACTAA	NA	False	NA	35	True	NA	NA	NA	65013689	65019700	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65014273_65018363_65018475_65018570
H1_mix_00012809	chr11	+	849	6	FSM	ENSG00000213465.8	ENST00000529384.5	830	6	-20	1	0	-1	multi-exon	FALSE	canonical	3	182	junction_5	1271.76548152558	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTGGCTGAGTCATTTG	16	True	NA	17	True	AATAAA	-16	NA	65014159	65022183	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65014273_65018363_65018475_65018570_65018734_65020418_65020500_65021720_65021889_65021970
H1_mix_00012818	chr11	+	1394	8	FSM	ENSG00000162300.13	ENST00000294258.8	1382	8	-12	0	0	0	multi-exon	TRUE	canonical	3	207	junction_6	19.7411824801425	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCGAGGCAGCCTTTTGC	-16	True	NA	12	True	AATAAA	-18	NA	65084209	65088398	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65084379_65084690_65084801_65085114_65085227_65086414_65086609_65086719_65086793_65086927_65087075_65087315_65087434_65087927
H1_mix_00012821	chr11	+	3537	15	Fusion	ENSG00000149809.17_ENSG00000149823.9	novel	2661	10	NA	NA	0	0	multi-exon	FALSE	canonical	3	436	junction_10	33.3791606746925	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGCTGGACTGGACGAG	-10	True	NA	NA	False	NA	NA	NA	65096213	65114832	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr11_+_65096479_65096997_65097128_65107580_65107728_65107802_65108023_65108196_65108915_65109279_65109496_65109704_65109924_65110481_65110604_65110693_65110782_65111326_65112068_65112514_65112712_65112810_65112866_65113219_65113415_65113490_65113595_65114712
H1_mix_00012827	chr11	+	1583	10	FSM	ENSG00000149809.17	ENST00000279263.14	1578	10	-5	0	0	0	multi-exon	FALSE	canonical	3	436	junction_1	31.8189321700846	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGAGATGCTCTTCCTCCT	-6	True	NA	20	True	AATGAA	-15	NA	65111866	65116230	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65112068_65112514_65112712_65112810_65112866_65113219_65113415_65113490_65113595_65114712_65114833_65114912_65115082_65115313_65115395_65115475_65115599_65115892
H1_mix_00012828	chr11	+	1495	10	NIC	ENSG00000149809.17	novel	1578	10	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	99	junction_1	131.136438231709	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGAGATGCTCTTCCTCCT	-4	True	NA	20	True	AATGAA	-15	NA	65111868	65116230	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_65111982_65112514_65112712_65112810_65112866_65113219_65113415_65113490_65113595_65114712_65114833_65114912_65115082_65115313_65115395_65115475_65115599_65115892
H1_mix_00012829	chr11	+	2094	8	FSM	ENSG00000149809.17	ENST00000530650.5	2094	8	0	0	0	0	multi-exon	FALSE	canonical	3	484	junction_1	24.0874257992143	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGAGATGCTCTTCCTCCT	29	False	NA	20	True	AATGAA	-15	NA	65111901	65116230	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65112866_65113219_65113415_65113490_65113595_65114712_65114833_65114912_65115082_65115313_65115395_65115475_65115599_65115892
H1_mix_00012836	chr11	+	3130	22	FSM	ENSG00000014216.16	ENST00000279247.11	2952	22	-183	5	0	0	multi-exon	FALSE	canonical	3	462	junction_1	103.806356439229	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGTGTTTCTCCCCAG	28	False	NA	21	True	AATAAA	-17	NA	65181744	65212001	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65182014_65182700_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214_65187299_65187954_65188041_65188413_65188489_65188585_65188747_65204682_65204859_65205709_65205722_65206462_65206675_65206779_65206820_65208054_65208121_65208204_65208263_65209322_65209388_65209848_65209918_65210017_65210097_65210335_65210453_65210813_65210873_65211259
H1_mix_00012837	chr11	+	2960	22	FSM	ENSG00000014216.16	ENST00000524773.5	2960	22	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	187.010470561873	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGTGTTTCTCCCCAG	28	False	NA	21	True	AATAAA	-17	NA	65181744	65212001	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65181844_65182700_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214_65187299_65187954_65188041_65188413_65188489_65188585_65188747_65204682_65204859_65205709_65205722_65206462_65206675_65206779_65206820_65208054_65208121_65208204_65208263_65209322_65209388_65209848_65209918_65210017_65210097_65210335_65210453_65210813_65210873_65211259
H1_mix_00012841	chr11	+	3086	21	FSM	ENSG00000014216.16	ENST00000527323.5	3086	21	0	0	0	0	multi-exon	FALSE	canonical	3	797	junction_7	58.4202661753608	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCACATCTGTCTGTGAT	12	True	NA	7	True	AATAAA	-3	NA	65182461	65211987	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214_65187299_65187954_65188041_65188413_65188489_65188585_65188747_65204682_65204859_65205709_65205722_65206462_65206675_65206779_65206820_65208054_65208121_65208204_65208263_65209322_65209388_65209848_65209918_65210017_65210097_65210335_65210453_65210813_65210873_65211259
H1_mix_00012849	chr11	+	2901	12	NNC	ENSG00000133884.10	novel	2462	12	NA	NA	-10976	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	235.277715276618	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCTGCTGGATGGTTT	3967	False	NA	14	True	AATAAA	-14	NA	65322875	65352979	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_65322981_65333486_65333919_65340384_65340546_65340965_65341074_65341398_65341563_65343744_65343838_65343990_65344070_65345665_65345804_65345929_65346059_65346246_65346360_65348849_65348932_65351682
H1_mix_00012850	chr11	+	3714	11	FSM	ENSG00000133884.10	ENST00000528416.6	3714	11	0	0	0	0	multi-exon	FALSE	canonical	3	581	junction_4	94.8791336385404	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGGCCCAAGCATGCAG	-10	True	NA	3	True	AATAAA	-18	NA	65333851	65354262	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65333919_65340384_65340546_65340965_65341074_65341398_65341563_65343744_65343838_65343990_65344070_65345665_65345804_65345929_65346059_65346246_65346360_65348849_65348932_65351682
H1_mix_00012858	chr11	+	2593	18	FSM	ENSG00000142186.18	ENST00000420247.6	2583	18	-10	0	-2	0	multi-exon	FALSE	canonical	3	150	junction_13	63.8618751709189	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTGCCGGGCTCAGT	-27	True	NA	28	True	AATAAA	-13	NA	65525074	65538704	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65525265_65525573_65525715_65525920_65526044_65526123_65526351_65526782_65526874_65526961_65527118_65530628_65530788_65531575_65531684_65532691_65532806_65535226_65535383_65535952_65536142_65536258_65536335_65536585_65536751_65537036_65537129_65537808_65537881_65537966_65538183_65538269_65538325_65538441
H1_mix_00012859	chr11	+	2554	18	NNC	ENSG00000142186.18	novel	2583	18	NA	NA	2	4	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	107.195323453228	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCCGGGCTCAGTCTAG	12	True	NA	32	True	AATAAA	-17	NA	65525113	65538708	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_65525265_65525573_65525715_65525924_65526044_65526123_65526351_65526782_65526874_65526961_65527118_65530628_65530788_65531575_65531684_65532691_65532806_65535226_65535383_65535952_65536142_65536258_65536335_65536585_65536751_65537036_65537129_65537808_65537881_65537966_65538183_65538269_65538325_65538441
H1_mix_00012860	chr11	+	2586	17	FSM	ENSG00000142186.18	ENST00000527009.5	2586	17	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_12	42.7832016538033	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAGAGCCACAATAAATTC	311	False	NA	-1	True	NA	NA	NA	65525412	65538675	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65525715_65525920_65526044_65526123_65526351_65526782_65526874_65526961_65527118_65530628_65530788_65531575_65531684_65532691_65532806_65535226_65535383_65535952_65536142_65536258_65536335_65536585_65536751_65536985_65537129_65537808_65537881_65537966_65538183_65538269_65538325_65538441
H1_mix_00012862	chr11	+	886	3	FSM	ENSG00000173465.8	ENST00000531405.5	879	3	-7	0	-7	0	multi-exon	FALSE	canonical	3	917	junction_2	49	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGATGAGTTGAGCTTGT	-18	True	NA	NA	False	NA	NA	NA	65570452	65571888	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65570756_65570885_65570971_65571390
H1_mix_00012863	chr11	+	2426	2	FSM	ENSG00000173465.8_ENSG00000176973.8	ENST00000316409.2	1409	2	-1025	8	507	0	multi-exon	FALSE	canonical	3	35	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGCTCTGCCTGGCTGG	853	False	NA	12	True	AATAAA	-14	NA	65571323	65574190	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65572961_65573401
H1_mix_00012864	chr11	+	1337	2	FSM	ENSG00000176973.8	ENST00000449319.2	1337	2	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGCTCTGCCTGGCTGG	171	False	NA	12	True	AATAAA	-14	NA	65572461	65574190	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65572961_65573352
H1_mix_00012865	chr11	+	1251	2	FSM	ENSG00000176973.8	ENST00000530349.2	1251	2	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGCTCTGCCTGGCTGG	-6	True	NA	12	True	AATAAA	-14	NA	65572537	65574190	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65572961_65573362
H1_mix_00012870	chr11	+	3499	16	FSM	ENSG00000213445.10	ENST00000534313.6	3499	16	0	0	0	0	multi-exon	TRUE	canonical	3	54	junction_1	76.447338446512	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGTCTGTGTCTGAACA	-18	True	NA	25	True	AGTAAA	-8	NA	65638100	65650912	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65638183_65640830_65641601_65642249_65642378_65642462_65642640_65644954_65645130_65645853_65645958_65646220_65646379_65646455_65647066_65647383_65647659_65649261_65649481_65649560_65649673_65649756_65649866_65649949_65650052_65650137_65650193_65650400_65650480_65650568
H1_mix_00012871	chr11	+	799	6	FSM	ENSG00000213445.10	ENST00000531339.5	799	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	111.335528920466	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGGGTGGGCTGAGCTT	-10	True	NA	NA	False	NA	NA	NA	65647365	65650479	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65647659_65649511_65649673_65649756_65649866_65649949_65650052_65650137_65650193_65650400
H1_mix_00012874	chr11	+	2219	14	FSM	ENSG00000172977.13	ENST00000377046.7	2237	14	17	1	-5	0	multi-exon	TRUE	canonical	3	92	junction_5	92.7274430695943	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCCATGCAAAGTTCTTG	-6	True	NA	24	True	AATAAA	-16	NA	65712012	65719603	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65712280_65712378_65712446_65712765_65712835_65712921_65713059_65713347_65713504_65713592_65713668_65713773_65713849_65714494_65714744_65714820_65714911_65716666_65716808_65716888_65716983_65718589_65718750_65718872_65718955_65719046
H1_mix_00012882	chr11	+	2369	16	FSM	ENSG00000172732.12	ENST00000308110.9	2364	16	-5	0	-5	0	multi-exon	FALSE	canonical	3	103	junction_9	26.2944016010168	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAACAGTCCAGTTGCCTCG	-13	True	NA	27	True	AATAAA	-39	NA	65860427	65866439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65860889_65860972_65861103_65861349_65861436_65861946_65862046_65862210_65862280_65862443_65862530_65863064_65863206_65863409_65863503_65863599_65863722_65863803_65863902_65864496_65864614_65864719_65864816_65865016_65865146_65865219_65865324_65865810_65865895_65865985
H1_mix_00012884	chr11	+	1232	13	FSM	ENSG00000172732.12	ENST00000529374.5	1232	13	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_8	50.4815697942218	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGGAGAAGGCAGCAGCC	253	False	NA	NA	False	NA	NA	NA	65861064	65865274	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65861103_65861349_65861436_65861946_65862046_65862210_65862280_65862443_65862530_65863064_65863206_65863409_65863503_65863599_65863722_65863800_65863902_65864496_65864614_65864719_65864816_65865016_65865146_65865219
H1_mix_00012888	chr11	+	963	1	FSM	ENSG00000175602.4	ENST00000312579.4	963	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	273	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCACGGCCTGGGCAGCGT	19	True	NA	10	True	AATAAA	-17	NA	65890672	65891635	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65890700_65891600
H1_mix_00012890	chr11	+	822	7	FSM	ENSG00000175550.8	ENST00000312515.7	822	7	0	0	0	0	multi-exon	TRUE	canonical	3	1525	junction_6	202.406356948919	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCTGCGCAGGACGTCAT	-4	True	NA	30	True	AATAAA	-24	NA	65919425	65921563	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65919544_65919779_65919853_65919947_65920042_65920342_65920463_65920568_65920663_65920883_65920973_65921329
H1_mix_00012891	chr11	+	751	6	FSM	ENSG00000175550.8	ENST00000532933.1	751	6	0	0	0	0	multi-exon	FALSE	canonical	3	1525	junction_5	216.785608378416	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTCCAGGCTCTGCGCA	7	True	NA	21	True	AATAAA	-15	NA	65919723	65921554	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65919853_65919947_65920042_65920342_65920463_65920568_65920663_65920883_65920973_65921329
H1_mix_00012892	chr11	+	837	3	FSM	ENSG00000175550.8	ENST00000530791.5	837	3	0	0	0	0	multi-exon	FALSE	canonical	3	1525	junction_2	111	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCAGTGTCTGTTCCAG	201	False	NA	11	True	AATAAA	-5	NA	65920129	65921544	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65920663_65920883_65920973_65921329
H1_mix_00012897	chr11	+	615	2	FSM	ENSG00000175334.8	ENST00000524628.1	612	2	0	-3	0	0	multi-exon	FALSE	canonical	3	859	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCTTTGTGCACTGAAA	-19	True	NA	30	True	AATAAA	-18	NA	66002479	66004149	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66002571_66003625
H1_mix_00012898	chr11	+	918	3	FSM	ENSG00000175334.8	ENST00000312175.7	731	3	-187	0	0	0	multi-exon	FALSE	canonical	3	2813	junction_1	697.5	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCTTTGTGCACTGAAA	16	False	NA	30	True	AATAAA	-18	NA	66002315	66004149	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66002571_66003234_66003374_66003625
H1_mix_00012899	chr11	+	1135	3	FSM	ENSG00000175334.8	ENST00000533166.5	1135	3	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	2044.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGTGGCTTTCATGACT	82	False	NA	12	True	NA	NA	NA	66002580	66004131	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66003071_66003234_66003374_66003625
H1_mix_00012905	chr11	+	3685	22	NIC	ENSG00000087365.16	novel	3272	22	NA	NA	692	0	intron_retention	TRUE	canonical	3	286	junction_4	411.648309927005	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTCCCAAGGAAAGAGATG	NA	False	NA	24	True	AATAAA	-4	NA	66051517	66068878	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_66052518_66052672_66052720_66053026_66053105_66055075_66055316_66055537_66055586_66056837_66056956_66057265_66057376_66058053_66058151_66058313_66058406_66058829_66059046_66059200_66059339_66059514_66059596_66059781_66060010_66060581_66060732_66061685_66061776_66061890_66061999_66063008_66063117_66063399_66063543_66063627_66063730_66067945_66068046_66068147_66068334_66068673
H1_mix_00012906	chr11	+	2932	22	FSM	ENSG00000087365.16	ENST00000322535.11	3272	22	0	340	0	90	multi-exon	FALSE	canonical	3	1662	junction_4	195.848893577794	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTACAATCACTGGGCTG	0	True	NA	114	True	ACTAAA	-9	NA	66052363	66068968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66052518_66052672_66052720_66053026_66053105_66055075_66055316_66055534_66055586_66056837_66056956_66057265_66057376_66058053_66058151_66058313_66058406_66058829_66059046_66059200_66059339_66059514_66059596_66059781_66060010_66060581_66060732_66061685_66061776_66061890_66061999_66063008_66063117_66063399_66063543_66063627_66063730_66067945_66068046_66068147_66068334_66068673
H1_mix_00012912	chr11	+	4879	24	FSM	ENSG00000175115.13	ENST00000320580.9	4571	24	-308	0	-308	0	multi-exon	FALSE	canonical	3	158	junction_13	17.3230181123769	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGGGCTTCTATGCCC	206	False	NA	31	True	AATAAA	-20	NA	66069963	66244744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66070843_66193485_66193574_66210361_66210452_66211133_66211260_66216118_66216264_66216519_66216612_66216694_66216776_66219745_66219806_66220630_66220792_66221153_66221248_66227503_66227585_66230547_66230664_66230804_66230941_66232171_66232277_66232959_66233067_66233784_66233940_66234131_66234243_66235300_66235404_66235897_66235941_66238803_66238847_66239141_66239278_66241426_66241654_66242911_66243032_66243164
H1_mix_00012915	chr11	+	2953	16	FSM	ENSG00000174996.12	ENST00000394067.7	2953	16	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_1	38.2369222378348	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCTTGTTTTGAGACG	-1	True	NA	9	True	AATAAA	-17	NA	66257702	66267860	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66257872_66258583_66258823_66261741_66261973_66262122_66262193_66262813_66263037_66263659_66263748_66263850_66263953_66264045_66264220_66264344_66264445_66265022_66265073_66265167_66265236_66265654_66265764_66265853_66266013_66266092_66266218_66266432_66266491_66266872
H1_mix_00012916	chr11	+	2990	16	FSM	ENSG00000174996.12	ENST00000316924.9	2990	16	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	79.9978888610332	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCTTGTTTTGAGACG	-1	True	NA	9	True	AATAAA	-17	NA	66257702	66267860	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66257872_66258546_66258823_66261741_66261973_66262122_66262193_66262813_66263037_66263659_66263748_66263850_66263953_66264045_66264220_66264344_66264445_66265022_66265073_66265167_66265236_66265654_66265764_66265853_66266013_66266092_66266218_66266432_66266491_66266872
H1_mix_00012918	chr11	+	3755	13	FSM	ENSG00000174996.12	ENST00000394065.2	3755	13	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_7	21.8898758942728	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGGCTTGTTTTGAGAC	2436	False	NA	8	True	AATAAA	-16	NA	66260912	66267859	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66261973_66262122_66262193_66262813_66263037_66263659_66263748_66263850_66263953_66264045_66264220_66264344_66264445_66265022_66265073_66265167_66265236_66265654_66265764_66265853_66266013_66266092_66266218_66266432
H1_mix_00012921	chr11	+	1901	6	FSM	ENSG00000174903.16	ENST00000311481.11	1901	6	0	0	0	0	multi-exon	FALSE	canonical	3	949	junction_5	77.0750283814414	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGGTGGCCAAGTGTGG	6	True	NA	31	True	AATAAA	-43	NA	66268638	66277492	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66268694_66271796_66271870_66272156_66272253_66272364_66272461_66275803_66275936_66276043
H1_mix_00012934	chr11	+	716	5	FSM	ENSG00000248746.6	ENST00000511191.1	704	5	-12	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	142.341798147979	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGTGCCAGAGGAAGAC	-2	True	NA	NA	False	NA	NA	NA	66546902	66554561	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66547085_66551052_66551354_66551527_66551648_66554044_66554132_66554535
H1_mix_00012940	chr11	+	3029	3	FSM	ENSG00000173933.21	ENST00000396053.9	3029	3	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	257.5	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAACTGAATTTGTTGTT	0	True	NA	NA	False	ATTAAA	-14	NA	66638666	66668374	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66638753_66639699_66640124_66665855
H1_mix_00012941	chr11	+	1548	2	FSM	ENSG00000173933.21	ENST00000483858.5	1548	2	0	0	0	0	multi-exon	FALSE	canonical	3	584	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTATTTCCGTGACTCC	2	True	NA	17	True	AATAAA	-27	NA	66638697	66641192	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66638753_66639699
H1_mix_00012943	chr11	+	1033	3	FSM	ENSG00000173933.21	ENST00000530235.1	1011	3	-22	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	58.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCGGTGAAATAAATGGTTT	2	True	NA	-13	True	NA	NA	NA	66638697	66646439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66638894_66639699_66640124_66646026
H1_mix_00012944	chr11	+	1612	4	FSM	ENSG00000173933.21	ENST00000310092.12	1607	4	-5	0	0	0	multi-exon	FALSE	canonical	3	400	junction_2	75.2964511484808	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTATGTGTGCTTTGCGAG	2	True	NA	16	True	AATAAA	-16	NA	66638697	66646468	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66638753_66639699_66640124_66643449_66644141_66646026
H1_mix_00012945	chr11	+	1125	3	FSM	ENSG00000248643.5_ENSG00000173933.21	ENST00000398692.8	921	3	-233	29	-202	0	multi-exon	FALSE	canonical	3	183	junction_2	200.5	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCGGTGAAATAAATGGTTT	1349	False	NA	-13	True	NA	NA	NA	66638464	66646439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66638753_66639699_66640124_66646026
H1_mix_00012946	chr11	+	674	3	FSM	ENSG00000173933.21	ENST00000506523.6	654	3	-20	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	286.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCATTTCACTGTTCATTC	2	True	NA	3	True	AATAAA	-18	NA	66638697	66649930	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66638753_66639699_66640124_66649735
H1_mix_00012951	chr11	+	1800	15	NIC	ENSG00000173715.18	novel	1734	16	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	104.937712331591	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCCTCTTCCGCGTCTGC	21	True	NA	27	True	AATAAA	-18	NA	66744772	66843322	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_66744920_66759042_66759097_66788159_66788270_66796280_66796365_66800640_66800697_66801030_66801103_66803997_66804191_66813864_66814016_66816052_66816200_66821642_66821765_66822563_66822675_66828265_66828365_66838366_66838446_66842848_66843070_66843168
H1_mix_00012954	chr11	+	1756	15	NIC	ENSG00000173715.18	novel	1998	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	99.1682758687248	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCCTCTTCCGCGTCTGC	68	False	NA	27	True	AATAAA	-18	NA	66744819	66843322	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_66744920_66759042_66759097_66788159_66788270_66796280_66796365_66800640_66800697_66801030_66801103_66803994_66804191_66813864_66814016_66816052_66816200_66821642_66821765_66822563_66822675_66828265_66828365_66838366_66838446_66842848_66843070_66843168
H1_mix_00012955	chr11	+	1906	16	NIC	ENSG00000173715.18	novel	2135	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	115.190547451699	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCCTCTTCCGCGTCTGC	68	False	NA	27	True	AATAAA	-18	NA	66744819	66843322	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_66744920_66756352_66756506_66759042_66759097_66788159_66788270_66796280_66796365_66800640_66800697_66801030_66801103_66803994_66804191_66813864_66814016_66816052_66816200_66821642_66821765_66822563_66822675_66828265_66828365_66838369_66838446_66842848_66843070_66843168
H1_mix_00012956	chr11	+	1642	14	NIC	ENSG00000173715.18	novel	1734	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	117.955111309445	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCCTCTTCCGCGTCTGC	68	False	NA	27	True	AATAAA	-18	NA	66744819	66843322	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_66744920_66759042_66759097_66788159_66788270_66796280_66796365_66800640_66800697_66801030_66801103_66803997_66804191_66813864_66814016_66816052_66816200_66821642_66821765_66828265_66828365_66838366_66838446_66842848_66843070_66843168
H1_mix_00012957	chr11	+	3332	22	Fusion	ENSG00000173715.18_ENSG00000173653.8	novel	2135	17	NA	NA	0	-3	multi-exon	TRUE	canonical	0	0	junction_7	128.223939593226	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACATGGCCTTGGGCCTTT	68	False	NA	24	True	ATTAAA	-16	NA	66744819	66846523	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr11_+_66744920_66748378_66748518_66759042_66759097_66796280_66796365_66800640_66800697_66801030_66801103_66803994_66804191_66813864_66814016_66816052_66816200_66821642_66821765_66822563_66822675_66828265_66828365_66838366_66838446_66842848_66843070_66843168_66843641_66843758_66843862_66843959_66844040_66844285_66844365_66844868_66845037_66845165_66845238_66845499_66845563_66845859
H1_mix_00012960	chr11	+	810	7	FSM	ENSG00000173715.18	ENST00000531415.1	810	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	117.645890517075	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGGCAGCCGTTATCCCG	5691	False	NA	-22	True	NA	NA	NA	66821642	66843273	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66821765_66822563_66822675_66828265_66828365_66838369_66838446_66839131_66839208_66842848_66843070_66843168
H1_mix_00012961	chr11	+	2719	5	FSM	ENSG00000173653.8	ENST00000533277.5	2719	5	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_1	59.5036763570118	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGCCTTGGGCCTTTGGG	NA	False	NA	27	True	ATTAAA	-19	NA	66842834	66846526	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66843862_66843955_66844040_66844285_66844365_66844868_66845037_66845165
H1_mix_00012962	chr11	+	1379	7	FSM	ENSG00000173653.8	ENST00000524506.5	1379	7	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_6	136.024099172005	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTTGGGCCTTTGGGAA	-1	True	NA	29	True	ATTAAA	-21	NA	66843436	66846528	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66843641_66843758_66843862_66843955_66844040_66844285_66844365_66844868_66845037_66845165_66845238_66845859
H1_mix_00012963	chr11	+	1442	8	FSM	ENSG00000173653.8	ENST00000524849.5	1428	8	-14	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	108.365029376809	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGCCTTTGGGAATCGG	-1	True	NA	33	True	ATTAAA	-25	NA	66843436	66846532	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66843641_66843758_66843862_66843959_66844040_66844285_66844365_66844868_66845037_66845165_66845238_66845499_66845563_66845859
H1_mix_00012964	chr11	+	1466	8	FSM	ENSG00000173653.8	ENST00000309657.8	1462	8	-4	0	0	0	multi-exon	FALSE	canonical	3	281	junction_2	60.4317797189525	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTTGGGATCTTGTGTG	-1	True	NA	53	True	ATTAAA	-45	NA	66843436	66846552	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66843641_66843758_66843862_66843955_66844040_66844285_66844365_66844868_66845037_66845165_66845238_66845499_66845563_66845859
H1_mix_00012966	chr11	+	1270	7	FSM	ENSG00000173653.8	ENST00000525356.1	1270	7	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	108.627293480455	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTTGGGCCTTTGGGAA	285	False	NA	29	True	ATTAAA	-21	NA	66843722	66846528	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66843862_66843959_66844040_66844285_66844365_66844868_66845037_66845165_66845238_66845499_66845563_66845859
H1_mix_00012972	chr11	+	6529	21	FSM	ENSG00000173120.15	ENST00000398645.6	6511	21	-18	0	-12	0	multi-exon	FALSE	canonical	2	2	junction_17	28.2688432731161	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTAAAGGGTTTGGTTGT	-18	True	NA	6	True	AATAAA	-18	NA	67119250	67257665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67120050_67121233_67121359_67180078_67180218_67181319_67181399_67181845_67181893_67207509_67207689_67215339_67215447_67215855_67215950_67217730_67217885_67219287_67219404_67228036_67228164_67231565_67231961_67243008_67243093_67245188_67245459_67245984_67246117_67248280_67248371_67250085_67250347_67252693_67252858_67253452_67253612_67254202_67254419_67254873
H1_mix_00012973	chr11	+	3715	10	FSM	ENSG00000173120.15	ENST00000530342.2	3651	10	-64	0	-64	0	multi-exon	FALSE	canonical	3	36	junction_1	22.294881215092	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCGGAATTTCTTTTGGG	1	True	NA	39	True	AAAAAG	-11	NA	67239982	67256373	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67240370_67243008_67243093_67245188_67245459_67245984_67246117_67248280_67248371_67250085_67250799_67252693_67252858_67253452_67253612_67254202_67254419_67254873
H1_mix_00012976	chr11	+	4493	17	FSM	ENSG00000173020.11	ENST00000416281.6	4493	17	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_13	36.559828962264	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCGGCTGTCTCAGACTCT	2008	False	NA	26	True	TATAAA	-13	NA	67276536	67286555	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67277349_67279199_67279274_67279417_67279520_67279625_67279701_67279838_67279901_67280731_67281185_67281458_67281559_67281649_67281729_67281821_67282543_67282751_67282819_67283127_67283229_67283706_67283774_67283853_67283950_67284210_67284374_67284846_67284984_67285074_67285189_67285285
H1_mix_00012978	chr11	+	886	9	FSM	ENSG00000173020.11	ENST00000532099.5	886	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	167.623788213368	869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGTGAGGGTCGCCGGCT	3725	False	NA	NA	False	AAGAAA	-28	NA	67281508	67284369	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67281559_67281649_67281729_67281821_67281953_67282270_67282366_67282434_67282543_67282751_67282819_67283127_67283229_67283853_67283950_67284210
H1_mix_00012981	chr11	+	751	3	FSM	ENSG00000173020.11	ENST00000524899.1	751	3	0	0	0	0	multi-exon	FALSE	canonical	3	540	junction_2	24.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCGCTTGCCTCGGCTCCT	526	False	NA	NA	False	NA	NA	NA	67284270	67285591	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67284374_67284846_67285189_67285285
H1_mix_00012983	chr11	+	2219	16	FSM	ENSG00000172932.16	ENST00000308440.11	2219	16	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_1	36.2421485750132	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCTGCTCTGCTCACTGG	28	True	NA	5	True	AATAAA	-15	NA	67289347	67302483	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67289551_67289828_67289966_67290077_67290214_67290321_67290447_67291475_67291522_67291602_67291747_67291990_67292181_67299057_67299125_67299529_67299612_67299826_67299889_67299992_67300124_67300989_67301148_67301281_67301399_67301487_67301652_67301731_67301824_67302118
H1_mix_00012985	chr11	+	2768	8	FSM	ENSG00000172932.16	ENST00000512231.5	2768	8	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	12.47855302967	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCTGCTCTGCTCACTGG	8507	False	NA	5	True	AATAAA	-15	NA	67297932	67302483	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67299612_67299826_67299889_67299992_67300124_67300989_67301148_67301281_67301399_67301487_67301652_67301731_67301824_67302118
H1_mix_00012992	chr11	+	2096	11	FSM	ENSG00000172613.8	ENST00000307980.7	2086	11	-10	0	0	0	multi-exon	FALSE	canonical	3	59	junction_10	12.3838604643302	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAAGGCTCCATGTTCCC	-8	True	NA	NA	False	ATTAAA	-18	NA	67391975	67398410	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67392079_67392160_67392232_67392653_67392783_67393495_67393611_67393690_67393791_67395715_67395826_67395911_67396022_67396110_67396176_67396262_67396401_67397178_67397387_67397463
H1_mix_00012995	chr11	+	3848	8	FSM	ENSG00000172508.11	ENST00000531388.1	5065	8	1216	1	1216	0	multi-exon	TRUE	canonical	1	1	junction_1	0.63887656499994	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGTCTAGATAGGTTCT	76	False	NA	NA	False	AATAAA	-16	NA	67417411	67425604	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67417678_67418430_67418521_67418755_67419244_67419486_67419662_67419752_67419839_67420608_67420841_67420938_67421220_67423374
H1_mix_00012997	chr11	+	1744	15	FSM	ENSG00000175634.15	ENST00000312629.10	1733	15	-11	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	110.230671867716	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGACCTGGCTCTTTGT	-3	True	NA	27	True	ATTAAA	-14	NA	67428482	67435401	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67428624_67428981_67429023_67429119_67429241_67429526_67429596_67431367_67431516_67432599_67432658_67432736_67432838_67432951_67433043_67433125_67433217_67433339_67433448_67433994_67434058_67434197_67434276_67434376_67434485_67434581_67434695_67434988
H1_mix_00012998	chr11	+	497	2	FSM	ENSG00000175634.15	ENST00000525726.1	497	2	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATCATGCTCAGCAGCCA	3754	False	NA	NA	False	NA	NA	NA	67432239	67432815	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67432658_67432736
H1_mix_00013000	chr11	+	1429	6	FSM	ENSG00000110711.11	ENST00000279146.8	1236	6	-219	26	-219	0	multi-exon	FALSE	canonical	3	189	junction_2	16.8807582768074	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATAAAGGCCTTTATTTA	5887	False	NA	0	True	NA	NA	NA	67482806	67491077	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67483258_67487005_67487186_67489266_67489456_67490037_67490215_67490315_67490458_67490787
H1_mix_00013001	chr11	+	721	4	FSM	ENSG00000110711.11	ENST00000682659.1	721	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	103.964737611686	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTATTTATCTCTCTCT	21	True	NA	9	True	TATAAA	-2	NA	67483154	67491086	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67483258_67490037_67490215_67490315_67490458_67490787
H1_mix_00013008	chr11	+	736	3	FSM	ENSG00000084207.18	ENST00000467591.1	736	3	0	0	0	0	multi-exon	FALSE	canonical	3	13410	junction_1	380.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTGAGGGTTGGGGGGA	71	False	NA	-37	True	NA	NA	NA	67584794	67586569	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67585242_67586103_67586212_67586388
H1_mix_00013009	chr11	+	1516	10	FSM	ENSG00000167792.13	ENST00000529927.5	1503	10	-13	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	244.484693656063	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCCAGCTGCCGCTGCTG	-4	True	NA	10	True	AATAAA	-15	NA	67606926	67612528	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67607050_67608395_67608479_67608551_67608723_67609451_67609636_67610380_67610571_67610994_67611208_67611402_67611570_67611896_67611979_67612119_67612266_67612371
H1_mix_00013010	chr11	+	1562	10	FSM	ENSG00000167792.13	ENST00000322776.11	1560	10	-9	7	0	-7	multi-exon	FALSE	canonical	3	688	junction_1	43.305119019965	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTGTGCTCTTTACCCT	-4	True	NA	29	True	AATAAA	-34	NA	67606926	67612547	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67607077_67608395_67608479_67608551_67608723_67609451_67609636_67610380_67610571_67610994_67611208_67611402_67611570_67611896_67611979_67612119_67612266_67612371
H1_mix_00013012	chr11	+	1876	3	FSM	ENSG00000167792.13	ENST00000528314.1	559	3	-1268	-49	0	0	multi-exon	FALSE	canonical	3	738	junction_2	9.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGTAGGGAGAGATGTAG	27	True	NA	NA	False	NA	NA	NA	67606957	67609635	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67608479_67608551_67608723_67609451
H1_mix_00013015	chr11	+	1748	7	FSM	ENSG00000167792.13	ENST00000526770.5	1748	7	0	0	0	0	multi-exon	FALSE	canonical	3	738	junction_1	29.3011186741318	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCCAGCTGCCGCTGCTG	1607	False	NA	10	True	AATAAA	-15	NA	67608537	67612528	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67608723_67609451_67609636_67610380_67611208_67611402_67611570_67611896_67611979_67612119_67612266_67612371
H1_mix_00013024	chr11	+	817	7	FSM	ENSG00000110717.13	ENST00000526446.5	814	7	-3	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	858.421160555172	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTGGGAGGCCGAGATC	-2	True	NA	-82	True	NA	NA	NA	68030680	68036537	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_68030734_68032151_68032210_68032285_68032524_68032922_68033013_68033110_68033284_68036252_68036382_68036461
H1_mix_00013025	chr11	+	360	3	FSM	ENSG00000110717.13	ENST00000528492.1	353	3	-7	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	982	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCACGGCCTCTTGTCTTG	-2	True	NA	20	True	AATAAA	-11	NA	68030680	68036639	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_68030734_68036252_68036382_68036461
H1_mix_00013026	chr11	+	737	7	FSM	ENSG00000110717.13	ENST00000313468.10	737	7	0	0	0	0	multi-exon	FALSE	canonical	3	1404	junction_1	376.226623489383	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCTCTTGTCTTGACTCT	-2	True	NA	25	True	AATAAA	-16	NA	68030680	68036644	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_68030734_68032151_68032210_68032285_68032337_68032922_68033013_68033110_68033284_68036252_68036382_68036461
H1_mix_00013028	chr11	+	536	2	FSM	ENSG00000110717.13	ENST00000531282.1	536	2	0	0	0	0	multi-exon	FALSE	canonical	3	2139	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCTCTTGTCTTGACTCT	2791	False	NA	25	True	AATAAA	-16	NA	68036028	68036644	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_68036382_68036461
H1_mix_00013030	chr11	+	2685	20	FSM	ENSG00000110719.10	ENST00000265686.8	2668	20	-17	0	-17	0	multi-exon	FALSE	canonical	3	50	junction_5	24.939705685264	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGTCTCGTCTCTCTTC	-23	True	NA	6	True	AATAAA	-18	NA	68039007	68050895	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_68039120_68041267_68041389_68041752_68041832_68042642_68042864_68042945_68043032_68043370_68043498_68043570_68043654_68043813_68043908_68044131_68044345_68044957_68045103_68047432_68047573_68047646_68047805_68047881_68047973_68048878_68048998_68049080_68049295_68049662_68049789_68049961_68050067_68050136_68050255_68050486_68050665_68050740
H1_mix_00013032	chr11	+	3007	19	NIC	ENSG00000110719.10	novel	2668	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	106	junction_6	17.8540032513374	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGTCTCGTCTCTCTTC	-6	True	NA	6	True	AATAAA	-18	NA	68039024	68050895	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_68039120_68041267_68041389_68041752_68041832_68042642_68042864_68042945_68043498_68043570_68043654_68043813_68043908_68044131_68044345_68044957_68045103_68047432_68047573_68047646_68047805_68047881_68047973_68048878_68048998_68049080_68049295_68049662_68049789_68049961_68050067_68050136_68050255_68050486_68050665_68050740
H1_mix_00013033	chr11	+	2457	15	FSM	ENSG00000110719.10	ENST00000532635.5	2457	15	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_2	19.9166631087578	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGTCTCGTCTCTCTTC	177	False	NA	6	True	AATAAA	-18	NA	68042979	68050895	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_68043498_68043570_68043654_68043813_68043908_68044131_68044345_68044957_68045103_68047432_68047573_68047646_68047805_68047881_68047973_68048878_68048998_68049080_68049295_68049662_68049789_68049961_68050067_68050136_68050255_68050486_68050665_68050740
H1_mix_00013040	chr11	+	5089	24	FSM	ENSG00000110075.15	ENST00000393800.7	5072	24	-41	24	-20	0	multi-exon	FALSE	canonical	3	313	junction_15	105.915452960384	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGATTCTTTGTTTCTA	NA	False	NA	-6	True	AATACA	-29	NA	68460710	68615310	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_68460828_68519500_68519652_68537658_68537892_68544837_68545025_68548066_68548205_68551120_68551187_68554144_68554258_68558565_68558680_68564302_68564433_68567013_68567167_68569747_68569898_68571039_68571105_68574108_68574225_68575957_68576044_68583042_68583130_68587926_68588025_68590659_68590715_68591575_68591707_68596096_68596219_68600340_68600495_68601862_68601970_68603341_68603493_68609903_68610024_68613065
H1_mix_00013044	chr11	+	4794	23	FSM	ENSG00000110075.15	ENST00000265636.9	4794	23	0	0	0	0	multi-exon	FALSE	canonical	2	28	junction_10	220.870329558632	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTATGAGACTAACAGATGT	67	False	NA	45	True	NA	NA	NA	68460812	68615252	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_68460828_68505144_68505250_68519500_68519652_68537658_68537892_68544837_68545025_68548066_68548205_68551120_68551187_68554144_68554258_68558565_68558680_68564302_68564433_68569747_68569898_68571039_68571105_68574108_68574225_68575957_68576044_68587926_68588025_68590659_68590715_68591575_68591707_68596096_68596219_68600340_68600495_68601862_68601970_68603341_68603493_68609903_68610024_68613065
H1_mix_00013049	chr11	+	772	6	FSM	ENSG00000069482.7	ENST00000265643.4	749	6	0	-23	0	23	multi-exon	FALSE	canonical	3	4321	junction_3	213.011173415856	356	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTCTGTCTCATCACCAG	1	True	NA	40	True	AATAAA	-36	NA	68684543	68691198	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_68684733_68684923_68685005_68685593_68685649_68688013_68688101_68688848_68688927_68690916
H1_mix_00013056	chr11	+	4238	5	FSM	ENSG00000110092.4	ENST00000227507.3	4238	5	0	0	0	0	multi-exon	TRUE	canonical	3	441	junction_1	8.24621125123532	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTGGTGCCTGCCTCTTTG	0	True	NA	27	True	AATAAA	-16	NA	69641155	69654474	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_69641512_69643030_69643247_69643831_69643992_69647993_69648143_69651117
H1_mix_00013057	chr11	+	3797	2	FSM	ENSG00000110092.4	ENST00000542367.1	476	2	-50	-3271	-50	204	multi-exon	FALSE	canonical	3	457	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGACACTGCCACATCCCC	4039	False	NA	NA	False	NA	NA	NA	69647906	69654678	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_69648143_69651117
H1_mix_00013068	chr11	+	2474	4	FSM	ENSG00000085733.16	ENST00000482755.6	1087	4	-8	-1379	0	-709	multi-exon	FALSE	canonical	3	802	junction_2	41.2148840428633	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTACAAATTTACAAAGAT	-26	True	NA	NA	False	NA	NA	NA	70398528	70409721	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_70398615_70405264_70405362_70407297_70407385_70407517
H1_mix_00013070	chr11	+	2259	19	FSM	ENSG00000085733.16	ENST00000376561.7	2247	19	-12	0	0	0	multi-exon	FALSE	canonical	3	41	junction_18	238.353722256608	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGATTTGCTTTGGTCTGT	-26	True	NA	28	True	AATAAA	-19	NA	70398528	70436579	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_70398615_70405264_70405362_70407297_70407385_70407517_70407592_70409830_70409961_70414541_70414653_70415662_70415718_70417012_70417124_70419745_70419857_70420399_70420511_70422939_70422996_70425331_70425402_70429050_70429200_70431190_70431281_70433100_70433279_70433646_70433719_70435025_70435120_70435465_70435745_70436281
H1_mix_00013071	chr11	+	3158	17	FSM	ENSG00000085733.16	ENST00000346329.7	3272	17	114	0	-11	0	multi-exon	FALSE	canonical	3	262	junction_10	137.640936293495	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTGGTCTGTGGTCA	728	False	NA	33	True	AATAAA	-24	NA	70398517	70436584	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_70398615_70405264_70405362_70407297_70407385_70407517_70407592_70409830_70409961_70414541_70414653_70415662_70415718_70417012_70417124_70419745_70419857_70420399_70420511_70422939_70422996_70425331_70425402_70429050_70429200_70431190_70431281_70433100_70433279_70433646_70433719_70435025
H1_mix_00013072	chr11	+	1021	7	FSM	ENSG00000085733.16	ENST00000415461.2	1021	7	0	0	0	0	multi-exon	FALSE	canonical	3	746	junction_3	51.8226141113446	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTATCTAAAGTATTACC	8798	False	NA	NA	False	NA	NA	NA	70407352	70420253	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_70407385_70407517_70407592_70409830_70409961_70414541_70414653_70415662_70415718_70417012_70417124_70419745
H1_mix_00013073	chr11	+	579	2	FSM	ENSG00000085733.16	ENST00000525276.1	584	2	0	5	0	-5	multi-exon	FALSE	canonical	3	755	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGCCACCTTAAAGTTCTC	4762	False	NA	NA	False	NA	NA	NA	70414610	70416199	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_70414653_70415662
H1_mix_00013075	chr11	+	587	4	FSM	ENSG00000085733.16	ENST00000527962.5	587	4	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_1	222.696105838327	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCGGAGGCGGAGAGAGCC	3048	False	NA	NA	False	NA	NA	NA	70420124	70429125	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_70420511_70422939_70422996_70425331_70425402_70429050
H1_mix_00013087	chr11	+	2298	9	FSM	ENSG00000137522.18	ENST00000361756.8	2282	9	-16	0	-2	0	multi-exon	FALSE	canonical	3	208	junction_6	18.9930085821073	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTATCTTGCTTTCTTCT	-15	True	NA	30	True	AATAAA	-29	NA	71929029	71997597	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_71929125_71957226_71957265_71960749_71960892_71982760_71982916_71987003_71987112_71990596_71990718_71994718_71994853_71995449_71995552_71996194
H1_mix_00013090	chr11	+	2208	8	FSM	ENSG00000137522.18	ENST00000530137.1	2202	8	-6	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	56.4920077424719	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAACATTTATCTTGCTT	6	False	NA	24	True	AATAAA	-23	NA	71929075	71997591	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_71929125_71960749_71960892_71982760_71982916_71987003_71987112_71990596_71990718_71994718_71994853_71995449_71995552_71996194
H1_mix_00013096	chr11	+	1117	5	FSM	ENSG00000110195.14	ENST00000312293.9	1130	5	-12	25	-12	0	multi-exon	FALSE	canonical	2	8	junction_1	12.0830459735946	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTGTCTTGAGAATTAT	3	True	NA	12	True	AATAAA	-12	NA	72189545	72196298	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_72189760_72192165_72192342_72195270_72195460_72195611_72195748_72195896
H1_mix_00013097	chr11	+	1162	6	FSM	ENSG00000110195.14	ENST00000393681.6	1061	6	-101	0	9	0	multi-exon	FALSE	canonical	2	14	junction_1	10.6131993291373	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTGTCTTGAGAATTAT	24	False	NA	12	True	AATAAA	-12	NA	72189566	72196298	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_72189760_72190575_72190642_72192165_72192342_72195270_72195460_72195611_72195748_72195896
H1_mix_00013102	chr11	+	6360	27	FSM	ENSG00000165458.15	ENST00000538751.5	4656	27	-1704	0	1108	0	multi-exon	FALSE	canonical	3	268	junction_13	32.6351536603992	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGAGTAAAACTTCAATAAA	1389	False	NA	NA	False	AATAAA	-17	NA	72226176	72239105	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_72228254_72228347_72228499_72228726_72228848_72229089_72229231_72229464_72229559_72229662_72229753_72229923_72230020_72230120_72230272_72230361_72230469_72230795_72230899_72230992_72231190_72231497_72231616_72232239_72232337_72232625_72232765_72232874_72232975_72233074_72233164_72233440_72233523_72233654_72233745_72234280_72234395_72234526_72234616_72235115_72235204_72235295_72235452_72235674_72235754_72235845_72235987_72237123_72237797_72238041_72238176_72238262
H1_mix_00013104	chr11	+	550	3	FSM	ENSG00000165458.15	ENST00000537656.1	550	3	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_1	5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCATCCAGAAGAAGGTGG	348	False	NA	NA	False	NA	NA	NA	72228848	72229736	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_72229231_72229464_72229559_72229662
H1_mix_00013105	chr11	+	547	2	FSM	ENSG00000165458.15	ENST00000544806.1	547	2	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCCCGCAGGCCTGTCTC	2749	False	NA	NA	False	NA	NA	NA	72231249	72232420	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_72231616_72232239
H1_mix_00013106	chr11	+	1238	9	FSM	ENSG00000165458.15	ENST00000541303.5	1238	9	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_3	20.994046775217	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGGCACCCGTGAGCGG	3807	False	NA	NA	False	NA	NA	NA	72232307	72235424	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_72232765_72232874_72232975_72233074_72233164_72233440_72233523_72233654_72233745_72234280_72234395_72234526_72234616_72235115_72235204_72235295
H1_mix_00013107	chr11	+	1120	9	FSM	ENSG00000165458.15	ENST00000545355.5	1124	9	4	0	4	0	multi-exon	FALSE	canonical	3	306	junction_2	20.8981907111597	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCCGAGCAGCTCCCCGG	4374	False	NA	NA	False	NA	NA	NA	72232874	72235946	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_72232975_72233074_72233164_72233440_72233745_72234280_72234395_72234526_72234616_72235115_72235204_72235295_72235452_72235674_72235754_72235845
H1_mix_00013110	chr11	+	2277	18	FSM	ENSG00000168010.11	ENST00000435507.6	2254	18	-23	0	-14	0	multi-exon	FALSE	canonical	3	5	junction_3	27.1585120190062	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCGTCTGCCTACCTCT	-19	True	NA	11	True	NA	NA	NA	72814391	72829633	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_72814564_72816727_72816828_72817755_72817856_72821547_72821742_72822043_72822296_72822477_72822544_72822847_72822962_72824059_72824123_72824733_72824843_72825301_72825408_72826172_72826244_72826517_72826590_72826702_72826824_72827187_72827294_72828358_72828509_72828728_72828777_72828882_72828985_72829302
H1_mix_00013111	chr11	+	2159	18	FSM	ENSG00000168010.11	ENST00000321297.10	2140	18	-19	0	-14	0	multi-exon	FALSE	canonical	3	11	junction_7	24.9377078609162	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTCTGCCTACCTCTTT	-19	True	NA	13	True	NA	NA	NA	72814391	72829635	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_72814564_72816727_72816828_72817755_72817856_72821667_72821742_72822043_72822296_72822477_72822544_72822847_72822962_72824059_72824123_72824733_72824843_72825301_72825408_72826172_72826244_72826517_72826590_72826702_72826824_72827187_72827294_72828358_72828509_72828728_72828777_72828882_72828985_72829302
H1_mix_00013118	chr11	+	8168	21	FSM	ENSG00000110237.5	ENST00000263674.4	8163	21	-5	0	-5	0	multi-exon	TRUE	canonical	3	14	junction_7	5.2773099207835	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTGAGAGCTTCTGAGT	-3	True	NA	91	True	NA	NA	NA	73308270	73369388	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_73311831_73346882_73346961_73352829_73353013_73355532_73355650_73355860_73355954_73356174_73356352_73356708_73356760_73357024_73357135_73357241_73357328_73359833_73359953_73360319_73360534_73361087_73361162_73362039_73362240_73362432_73362735_73363205_73363456_73363746_73363834_73364171_73364240_73364451_73364601_73365389_73365565_73365677_73365948_73367583
H1_mix_00013119	chr11	+	970	3	FSM	ENSG00000110237.5	ENST00000543530.1	970	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	3.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGCCAGCCAGGCCATG	NA	False	NA	NA	False	NA	NA	NA	73365224	73367943	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_73365565_73365677_73365948_73367583
H1_mix_00013122	chr11	+	2016	7	FSM	ENSG00000021300.14	ENST00000227214.10	2016	7	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	15.9478316185409	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGCTTGCTTTGTTCCC	948	False	NA	33	True	AATAAA	-24	NA	73647548	73662819	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_73647739_73649011_73649088_73650552_73650706_73651787_73651891_73652974_73653015_73660752_73660853_73661465
H1_mix_00013133	chr11	+	1656	13	FSM	ENSG00000175575.13	ENST00000536003.5	1639	13	-17	0	0	0	multi-exon	FALSE	canonical	2	28	junction_2	296.31917851458	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCTGAATATGAAGAACTT	274	False	NA	17	True	AATAAA	-18	NA	73876979	73927728	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_73877069_73878778_73878820_73887030_73887100_73887353_73887458_73891111_73891202_73899145_73899245_73900269_73900421_73909398_73909594_73914412_73914505_73916544_73916661_73918949_73919033_73924614_73924698_73927284
H1_mix_00013134	chr11	+	1612	13	FSM	ENSG00000175575.13	ENST00000544552.5	1612	13	0	0	0	0	multi-exon	FALSE	canonical	2	51	junction_1	331.347207958996	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTTAAATACTCTTACT	22	False	NA	34	True	AATAAA	-35	NA	73877027	73927745	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_73877069_73878782_73878820_73887039_73887100_73887353_73887458_73891111_73891202_73899145_73899245_73900269_73900421_73909398_73909594_73914412_73914505_73916544_73916661_73918949_73919033_73924614_73924698_73927284
H1_mix_00013141	chr11	+	2636	2	FSM	ENSG00000254837.2	ENST00000526036.1	2493	2	0	-143	0	143	multi-exon	FALSE	canonical	3	47	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTTGAAATCAGGTAGC	-9	True	NA	-12	True	NA	NA	NA	74493365	74498676	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_74493974_74496648
H1_mix_00013144	chr11	+	5135	4	FSM	ENSG00000077514.9	ENST00000530163.1	1055	4	-1918	-2162	1441	51	multi-exon	FALSE	canonical	3	325	junction_3	6.79869268479038	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACAAAATGGTGGCTTTC	NA	False	NA	NA	False	NA	NA	NA	74626944	74643127	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_74629324_74634582_74634696_74636196_74636276_74640563
H1_mix_00013150	chr11	+	1534	6	FSM	ENSG00000118363.13	ENST00000532972.5	839	6	-41	-654	-37	124	multi-exon	FALSE	canonical	0	0	junction_4	1175.00546381708	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTCATAGTTTTGATGG	NA	False	NA	130	True	AATAAA	-23	NA	74949223	74977741	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_74949400_74963594_74963688_74965033_74965118_74965762_74965924_74969564_74969700_74976856
H1_mix_00013151	chr11	+	346	2	FSM	ENSG00000162139.10	ENST00000526068.1	431	2	17	68	-1	-68	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTGTGAGGACATCAAAA	16	True	NA	NA	False	AATAAA	-10	NA	74988941	74990095	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_74989155_74989962
H1_mix_00013153	chr11	+	5955	3	FSM	ENSG00000162139.10	ENST00000294064.9	5929	3	-26	0	-18	0	multi-exon	FALSE	canonical	3	18	junction_2	4	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTTTTTTTTTTCTTA	-19	True	NA	17	True	AATAAA	-18	NA	74988906	75010907	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_74989155_74994508_74994721_75005412
H1_mix_00013155	chr11	+	800	7	FSM	ENSG00000149273.15	ENST00000530721.5	796	7	-4	0	0	0	multi-exon	FALSE	canonical	3	403	junction_2	7013.14441285473	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGACTAGACTGTTCAG	-6	True	NA	68	True	AATAAA	-20	NA	75399514	75405692	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_75399578_75400693_75400778_75401639_75401734_75402351_75402447_75404019_75404208_75404671_75404869_75405613
H1_mix_00013157	chr11	+	908	6	FSM	ENSG00000149273.15	ENST00000422465.6	903	6	-5	0	0	0	multi-exon	FALSE	canonical	3	362	junction_1	7519.55862002551	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCCTGTAGTTCAGGAT	-6	True	NA	NA	False	NA	NA	NA	75399514	75405884	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_75399578_75401639_75401734_75402351_75402447_75404019_75404208_75404671_75404869_75405613
H1_mix_00013159	chr11	+	1322	7	FSM	ENSG00000149273.15	ENST00000527446.5	1306	7	-16	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	7053.32894021602	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATTTCTGTTGTCTATA	-6	True	NA	NA	False	NA	NA	NA	75399514	75422280	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_75399578_75400693_75400825_75401639_75401734_75402351_75402447_75404019_75404208_75404671_75404869_75421726
H1_mix_00013160	chr11	+	866	6	FSM	ENSG00000149273.15	ENST00000524851.5	866	6	0	0	0	0	multi-exon	FALSE	canonical	3	17519	junction_1	1189.08882763232	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAGAATACAAGTTGAAAC	22	False	NA	NA	False	AATAAA	-24	NA	75399542	75404994	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_75399578_75400693_75400825_75401639_75401734_75402351_75402447_75404019_75404208_75404671
H1_mix_00013166	chr11	+	3245	4	FSM	ENSG00000062282.15	ENST00000603363.5	5926	4	2681	0	-297	0	multi-exon	FALSE	canonical	3	47	junction_1	6.54896090146283	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCTCTATGAGTTATTGC	NA	False	NA	10	True	AATAAA	-11	NA	75794839	75801527	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_75796533_75797157_75797333_75798226_75798430_75800353
H1_mix_00013167	chr11	+	2678	3	FSM	ENSG00000062282.15	ENST00000603865.1	2678	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	3.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACAATGTTAGGTCTTTT	NA	False	NA	9	True	AAGAAA	-22	NA	75795136	75800632	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_75797333_75798226_75798430_75800353
H1_mix_00013182	chr11	+	2559	1	Genic_Genomic	ENSG00000178301.4	novel	NA	NA	NA	NA	18727	882	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCCATACAACACAAAATAAT	NA	False	NA	NA	False	NA	NA	NA	77608679	77611238	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr11_+_77608700_77611200
H1_mix_00013186	chr11	+	3770	8	FSM	ENSG00000118369.13	ENST00000526425.1	3770	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	4.35655733770769	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGATTGTTCTTCCTTGG	147	False	NA	13	True	AATAAA	-18	NA	78198969	78214707	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_78199725_78200132_78200235_78200649_78200809_78205841_78206036_78207529_78207624_78208856_78208964_78209447_78210745_78213645
H1_mix_00013190	chr11	+	3532	6	FSM	ENSG00000165490.13	ENST00000533655.6	3524	6	-12	4	-6	0	multi-exon	FALSE	canonical	3	150	junction_5	14.4692777981487	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTAGTCTTTTTTAAT	-20	True	NA	15	True	AATAAA	-14	NA	82901723	82934655	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_82901823_82913286_82913387_82914722_82914852_82928776_82928939_82930156_82930275_82931731
H1_mix_00013194	chr11	+	1487	1	FSM	ENSG00000246067.9	ENST00000663168.1	1487	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTTTTCAAAAAATGATC	18	True	NA	-10	True	NA	NA	NA	83072102	83073589	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_83072100_83073600
H1_mix_00013196	chr11	+	391	3	NIC	ENSG00000246067.9	novel	572	3	NA	NA	-1	-37	combination_of_known_junctions	FALSE	canonical	3	21	junction_2	8.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTCTCAGGTGTATGCA	36	False	NA	-47	True	ATTAAA	-23	NA	83072120	83073552	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_83072182_83072622_83072703_83073302
H1_mix_00013197	chr11	+	403	3	FSM	ENSG00000246067.9	ENST00000689041.1	463	3	56	4	3	-1	multi-exon	FALSE	canonical	3	21	junction_2	74.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATCTTCTGTGTCATGTT	40	False	NA	4	True	NA	NA	NA	83072124	83073603	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_83072147_83072622_83072703_83073302
H1_mix_00013199	chr11	+	1744	1	FSM	ENSG00000165494.12	ENST00000624931.1	1720	1	-24	0	5	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTCTTTTTTATTTAC	9	True	NA	14	True	AATAAA	-15	NA	83157135	83158879	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_83157100_83158900
H1_mix_00013201	chr11	+	6264	16	FSM	ENSG00000165494.12	ENST00000690938.1	6270	16	6	0	6	0	multi-exon	FALSE	canonical	3	43	junction_7	37.8329662243569	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTTGTACTTCTTTAT	10	True	NA	NA	False	AATAAA	-17	NA	83157136	83185794	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_83157632_83161326_83161453_83163678_83163868_83164206_83164402_83165599_83166715_83167124_83167309_83167414_83167899_83168427_83169996_83171817_83171915_83177084_83177205_83177713_83177820_83181007_83181192_83181853_83182010_83182398_83182492_83183037_83183074_83184678
H1_mix_00013202	chr11	+	5868	16	NNC	ENSG00000165494.12	novel	7677	16	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_10	43.8814564733467	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTTGTACTTCTTTAT	10	True	NA	NA	False	AATAAA	-17	NA	83157136	83185794	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_83157632_83161326_83161453_83163678_83163868_83164206_83164402_83165599_83166715_83167124_83167309_83167414_83167506_83168427_83169996_83171817_83171915_83177084_83177205_83177716_83177820_83181007_83181192_83181853_83182010_83182398_83182492_83183037_83183074_83184678
H1_mix_00013203	chr11	+	9118	15	ISM	ENSG00000165494.12	ENST00000690938.1	6270	16	3190	-2343	3161	686	3prime_fragment	FALSE	canonical	3	43	junction_6	34.9299590726403	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACACCACTACACCTGGC	1216	False	NA	NA	False	NA	NA	NA	83160320	83188137	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_83161453_83163678_83163868_83164206_83164402_83165599_83166715_83167124_83167309_83167414_83167899_83168427_83169996_83171817_83171915_83177084_83177205_83177713_83177820_83181007_83181192_83181853_83182010_83182398_83182492_83183037_83183074_83184678
H1_mix_00013207	chr11	+	1048	5	FSM	ENSG00000171204.13	ENST00000358867.11	1015	5	-62	29	-42	0	multi-exon	FALSE	canonical	3	364	junction_1	135.511069658534	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCATCTTTCCTCTTTGT	NA	False	NA	17	True	AATAAA	-31	NA	85628530	85636507	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_85628689_85631686_85631809_85634085_85634280_85635666_85635779_85636045
H1_mix_00013208	chr11	+	1198	6	FSM	ENSG00000171204.13	ENST00000531477.5	820	6	-78	-300	-58	0	multi-exon	TRUE	canonical	3	27	junction_2	314.298329616942	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTTTCCTCTTTGTATG	NA	False	NA	20	True	AATAAA	-34	NA	85628514	85636510	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_85628689_85629131_85629263_85631686_85631809_85634085_85634280_85635666_85635779_85636045
H1_mix_00013209	chr11	+	1318	4	FSM	ENSG00000171204.13	ENST00000534341.1	1273	4	-71	26	-42	0	multi-exon	FALSE	canonical	3	364	junction_1	143.810832538984	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTTTCCTCTTTGTATG	NA	False	NA	20	True	AATAAA	-34	NA	85628530	85636510	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_85628689_85631686_85631809_85634085_85634280_85635666
H1_mix_00013210	chr11	+	1218	6	FSM	ENSG00000171204.13	ENST00000393375.5	1210	6	-8	0	-8	0	multi-exon	FALSE	canonical	3	294	junction_1	184.574537788938	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGGCTTTAAGGTCTCA	NA	False	NA	49	True	AATAAA	-34	NA	85628564	85636539	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_85628689_85631144_85631317_85631686_85631809_85634085_85634280_85635666_85635779_85636045
H1_mix_00013211	chr11	+	895	4	FSM	ENSG00000171204.13	ENST00000526822.5	853	4	-39	-3	-8	0	multi-exon	FALSE	canonical	3	48	junction_1	303.611959945952	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTTTCCTCTTTGTATG	NA	False	NA	20	True	AATAAA	-34	NA	85628564	85636510	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_85628689_85634085_85634280_85635666_85635779_85636045
H1_mix_00013212	chr11	+	759	5	FSM	ENSG00000171202.7	ENST00000304511.7	759	5	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_2	19.0180834996589	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATGTCTAATGTTATGT	-10	True	NA	17	True	AATAAA	-13	NA	85647966	85656542	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_85648090_85650248_85650342_85654062_85654257_85655593_85655709_85656308
H1_mix_00013213	chr11	+	803	4	FSM	ENSG00000171202.7	ENST00000528105.5	656	4	-147	0	-137	0	multi-exon	FALSE	canonical	3	31	junction_1	119.978701813651	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATGTCTAATGTTATGT	NA	False	NA	17	True	AATAAA	-13	NA	85647829	85656542	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_85648090_85654062_85654257_85655593_85655709_85656308
H1_mix_00013214	chr11	+	742	5	FSM	ENSG00000171202.7	ENST00000531366.5	722	5	-20	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	111.600571235097	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTAATGTTATGTCTAAT	-10	True	NA	22	True	AATAAA	-18	NA	85647966	85656547	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_85648090_85650248_85650342_85654062_85654235_85655593_85655709_85656308
H1_mix_00013221	chr11	+	1713	4	FSM	ENSG00000149196.17	ENST00000533986.5	1694	4	-19	0	-19	0	multi-exon	FALSE	canonical	3	931	junction_2	60.4041941148681	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAATAAAATAATTTTTA	NA	False	NA	-13	True	AAAACA	-4	NA	86302191	86345638	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_86302479_86306244_86306483_86337378_86337531_86344602
H1_mix_00013222	chr11	+	1420	5	FSM	ENSG00000149196.17	ENST00000528004.5	1409	5	-11	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	518.899496530879	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGAGCAAATTTCTCTCA	4	True	NA	NA	False	NA	NA	NA	86302239	86345229	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_86302479_86306244_86306483_86326512_86326677_86337378_86337531_86344602
H1_mix_00013225	chr11	+	1558	2	FSM	ENSG00000149196.17	ENST00000529405.1	1558	2	0	0	0	0	multi-exon	FALSE	canonical	3	681	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGTGTGCCAAGTACCAT	NA	False	NA	13	True	AATAAA	-14	NA	86343507	86345927	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_86344722_86345583
H1_mix_00013226	chr11	+	1440	2	FSM	ENSG00000149201.10	ENST00000525247.1	1511	2	71	0	71	0	multi-exon	FALSE	canonical	3	29	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGTGCATGACAATTCA	NA	False	NA	16	True	AATAAA	-16	NA	86419146	86423106	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_86420054_86422573
H1_mix_00013233	chr11	+	9062	15	FSM	ENSG00000166575.17	ENST00000305494.6	8980	15	-82	0	8	0	multi-exon	FALSE	canonical	3	186	junction_2	21.2396433345664	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGGTAGATCTCCTTT	-12	True	NA	11	True	AATAAA	-19	NA	87037851	87328824	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_87038187_87067693_87067822_87071522_87071616_87091361_87091396_87157340_87157407_87236637_87236685_87295781_87295824_87302295_87302443_87305935_87306006_87309504_87309673_87313424_87313489_87314470_87314548_87318136_87318236_87319309_87319378_87321200
H1_mix_00013234	chr11	+	3487	19	FSM	ENSG00000077616.11	ENST00000534061.6	3466	19	-21	0	-21	0	multi-exon	FALSE	canonical	3	12	junction_3	3.51539822656808	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAACGAGTTAAGAATTA	-31	True	NA	NA	False	AATAAA	-22	NA	90134641	90192894	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_90134841_90135558_90135671_90147329_90147517_90149005_90149108_90150481_90150608_90152297_90152485_90158144_90158239_90159238_90159338_90162948_90163035_90163309_90163430_90163534_90163618_90168928_90168993_90170068_90170137_90173823_90173916_90175971_90176063_90177852_90178118_90181619_90181702_90182915_90183009_90191557
H1_mix_00013239	chr11	+	353	1	FSM	ENSG00000234106.3	ENST00000533701.1	349	1	-4	0	-4	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAAGGACATACATTTCC	4	True	NA	NA	False	NA	NA	NA	93535463	93535816	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_93535500_93535800
H1_mix_00013244	chr11	+	4165	9	FSM	ENSG00000182919.15	ENST00000354421.8	4163	9	-2	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	26.6549127741961	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCTCTTCTTACTCTTA	10	True	NA	NA	False	NA	NA	NA	93741669	93764749	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_93741729_93747296_93747449_93750345_93750445_93753681_93753756_93753935_93754038_93755209_93755387_93757315_93757466_93759741_93759859_93761514
H1_mix_00013246	chr11	+	2108	10	FSM	ENSG00000042429.12	ENST00000639596.1	2108	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_9	58.8452668623294	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTTAAAATATTACTAACT	NA	False	NA	-81	True	NA	NA	NA	93784262	93812310	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_93784764_93788000_93788168_93790573_93790794_93793727_93793865_93793950_93794036_93794907_93795061_93796409_93796541_93801834_93801973_93807517_93807636_93811852
H1_mix_00013250	chr11	+	1721	8	FSM	ENSG00000042429.12	ENST00000529626.2	2275	8	554	0	554	0	multi-exon	FALSE	canonical	3	137	junction_2	22.1534536856916	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAGTATGTGGTTTAA	9354	False	NA	-11	True	TTTAAA	-26	NA	93793727	93812380	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_93794036_93794907_93795061_93796409_93796541_93797534_93797720_93801834_93801973_93807517_93807636_93809716_93809877_93811852
H1_mix_00013262	chr11	+	6206	2	ISM	ENSG00000255666.7	ENST00000542479.1	532	5	2845	-5839	2845	4584	3prime_fragment	FALSE	canonical	3	185	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGAGTGTTTTGTCCAA	8413	False	NA	34	True	AATAAA	-25	NA	94650323	94657468	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_94650538_94651476
H1_mix_00013265	chr11	+	9058	13	FSM	ENSG00000166025.18	ENST00000433060.3	8980	13	-78	0	-64	0	multi-exon	FALSE	canonical	3	74	junction_2	27.259427523132	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCACTTAATGTTTTGCTT	247	False	NA	98	True	AATAAA	-18	NA	94768277	94876748	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_94768561_94795010_94795161_94799389_94800312_94821529_94821822_94830049_94830195_94831451_94831542_94850113_94850260_94853932_94854083_94859524_94859716_94864734_94864861_94865941_94866169_94869197_94869474_94870688
H1_mix_00013271	chr11	+	2084	7	FSM	ENSG00000166037.11	ENST00000538658.5	2084	7	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_4	42.5143766533419	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTTTATATTTATTTA	77	False	NA	11	True	AGTAAA	-18	NA	95790658	95823215	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_95790744_95799231_95799389_95812931_95813112_95813467_95813590_95817786_95817904_95818826_95818905_95821870
H1_mix_00013277	chr11	+	8375	25	NNC	ENSG00000165895.19	novel	8156	24	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	49.0378078345905	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTCTTTGTACTTGAAG	13	False	NA	24	True	AATAAA	-20	NA	100687301	100993941	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_100687833_100738265_100738499_100770342_100770439_100795104_100795167_100859553_100859626_100913451_100913554_100921493_100921605_100933155_100933261_100936202_100936333_100941783_100941885_100943758_100943869_100948456_100948536_100949916_100949957_100959882_100959946_100960914_100960990_100961683_100961769_100962408_100962468_100965670_100965777_100973174_100973335_100974458_100974604_100976056_100976438_100976814_100976972_100978986_100979050_100987512_100987593_100988712
H1_mix_00013293	chr11	+	684	4	FSM	ENSG00000187240.17	ENST00000530547.1	839	4	155	0	155	0	multi-exon	FALSE	canonical	3	42	junction_2	2.94392028877595	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGGAGTTATTGTTAAAA	NA	False	NA	-5	True	AATAAA	-2	NA	103455153	103479437	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_103455296_103456274_103456357_103468588_103468706_103479094
H1_mix_00013295	chr11	+	2647	3	FSM	ENSG00000152578.13	ENST00000527669.1	2647	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	17.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTGTAAACATGATAAATAT	28	False	NA	NA	False	AATAAA	-35	NA	105610120	105614436	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_105610429_105610907_105611086_105612275
H1_mix_00013298	chr11	+	5086	2	FSM	ENSG00000149313.11	ENST00000534152.1	5145	2	59	0	59	0	multi-exon	FALSE	canonical	3	512	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGCCTGACACTGTGTT	1054	False	NA	25	True	AATAAA	-27	NA	106091525	106098699	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_106094655_106096742
H1_mix_00013301	chr11	+	2643	3	NNC	ENSG00000179331.3	novel	1885	2	NA	NA	65	4673	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	11	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGAATTATGGTATCCAT	81	False	NA	21	True	AATAAA	-27	NA	107928512	107968155	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_107928796_107961945_107963191_107967040
H1_mix_00013309	chr11	+	576	5	ISM	ENSG00000149311.20	ENST00000452508.6	12954	64	-15	139738	-2	0	5prime_fragment	FALSE	canonical	2	8	junction_2	35.4003884159482	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTCGCGTGAGTTTTTT	34	True	NA	5	True	AATAAA	-14	NA	108223100	108229364	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_108223187_108224783_108224872_108227594_108227697_108227775_108227889_108229177
H1_mix_00013310	chr11	+	12954	64	FSM	ENSG00000149311.20	ENST00000452508.6	12954	64	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_51	11.8635689435179	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTAAGACTCATTCACTTT	-2	True	NA	6	True	AATAAA	-17	NA	108223115	108369102	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_108223187_108224783_108224872_108227594_108227697_108227775_108227889_108229177_108229324_108235669_108235835_108243952_108244119_108244787_108245027_108246963_108247128_108248932_108249103_108250700_108251073_108251836_108252032_108252816_108252913_108253813_108254040_108256214_108256341_108257480_108257607_108258985_108259076_108267170_108267343_108268409_108268610_108271063_108271147_108271250_108271407_108272531_108272608_108272721_108272853_108279490_108279609_108280994_108281169_108282709_108282880_108284226_108284474_108287599_108287716_108288976_108289104_108289601_108289802_108292618_108292794_108293312_108293478_108294926_108295060_108297286_108297383_108299713_108299886_108301647_108301790_108302852_108303030_108304674_108304853_108307896_108307985_108310159_108310316_108312410_108312499_108315822_108315912_108316010_108316114_108317372_108317522_108319953_108320059_108321300_108321421_108325309_108325545_108326057_108326226_108327644_108327759_108329020_108329239_108330213_108330422_108331443_108331558_108331878_108332038_108332761_108332901_108333885_108333969_108334968_108335110_108335844_108335962_108343221_108343372_108345742_108345909_108347278_108347366_108353765_108353881_108354810_108354875_108365081_108365219_108365324
H1_mix_00013318	chr11	+	3515	19	FSM	ENSG00000149311.20	ENST00000525056.2	3608	19	93	0	92	0	multi-exon	FALSE	canonical	0	0	junction_13	8.92492694578809	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTTATTTTGAAGGGCCT	NA	False	NA	NA	False	NA	NA	NA	108307896	108336882	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_108307985_108310159_108310316_108312410_108312499_108315822_108315912_108316010_108316114_108317372_108317522_108319953_108320059_108321300_108321421_108325309_108325545_108326057_108326226_108327644_108327759_108329020_108329239_108330213_108330422_108331443_108331558_108331878_108332038_108332761_108332901_108333885_108333969_108334968_108335110_108335844
H1_mix_00013320	chr11	+	3237	18	FSM	ENSG00000178105.12	ENST00000322536.8	3217	18	-20	0	-9	0	multi-exon	FALSE	canonical	3	186	junction_10	18.9887965512211	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTAATGTTTGCATTGTG	-31	True	NA	-79	True	AATAAA	-21	NA	108665048	108940927	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_108665340_108673466_108673528_108675595_108675727_108677084_108677244_108678314_108678436_108679370_108679561_108688935_108689063_108691875_108692039_108693515_108693601_108706738_108706838_108715878_108715967_108719796_108719886_108722996_108723463_108838445_108838566_108841314_108841477_108852152_108852210_108917872_108918019_108940245
H1_mix_00013321	chr11	+	3046	2	FSM	ENSG00000185742.7	ENST00000327419.7	5867	2	-9	2830	-9	-2830	multi-exon	FALSE	canonical	2	6	junction_1	0	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGCTCTTATCCAGAG	-6	True	NA	NA	False	NA	NA	NA	109422180	109426337	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_109422264_109423374
H1_mix_00013324	chr11	+	1188	5	ISM	ENSG00000214290.9	ENST00000638573.1	1080	6	1195	-106	17	0	3prime_fragment	FALSE	canonical	3	9	junction_1	5.40254569624358	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGATTTTTTTTAATT	440	False	NA	11	True	AATAAA	-18	NA	111299749	111308735	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_111299891_111300526_111300622_111304927_111304983_111306393_111306624_111308068
H1_mix_00013325	chr11	+	2536	7	FSM	ENSG00000204381.12	ENST00000375614.7	2536	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	6.61857655055493	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTAGTCTGGGTCAAAGC	-5	True	NA	NA	False	NA	NA	NA	111540719	111561745	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_111540929_111543922_111544221_111549617_111549776_111554560_111554594_111555206_111555291_111557540_111557644_111560094
H1_mix_00013326	chr11	+	9630	15	FSM	ENSG00000170145.5	ENST00000304987.4	9622	15	-16	8	-16	-8	multi-exon	TRUE	canonical	3	13	junction_6	7.38897413552857	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAAGAGCCCGGGTGATG	-11	True	NA	8	True	AATAAA	-12	NA	111602432	111730847	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_111602699_111616242_111616360_111620338_111620403_111688000_111688163_111700885_111701011_111701451_111701576_111703202_111703424_111704986_111705140_111712210_111712376_111719774_111720004_111720477_111720763_111720898_111721063_111721829_111721941_111722664_111722757_111723495
H1_mix_00013332	chr11	+	1716	5	ISM	ENSG00000150764.14	ENST00000440460.7	5826	20	109	46658	32	0	5prime_fragment	FALSE	canonical	3	38	junction_2	4.43705983732471	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTCAGTGGCATTTAGTA	45	False	NA	NA	False	ATTAAA	-15	NA	111937451	111975995	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_111937560_111964548_111964679_111968512_111968639_111974022_111974255_111974875
H1_mix_00013342	chr11	+	1339	4	FSM	ENSG00000204370.13	ENST00000375549.8	1339	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	838.192234646816	317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTAGCTATCAGTAGTT	1	True	NA	27	True	AATAAA	-35	NA	112086872	112095794	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_112086960_112087856_112087974_112088866_112089012_112094804
H1_mix_00013345	chr11	+	872	6	FSM	ENSG00000150787.8	ENST00000280362.8	872	6	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_3	30.2191991952136	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTGGAGACAATATATATA	35	True	NA	7	True	AATAAA	-18	NA	112226427	112233973	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_112226527_112228593_112228674_112230207_112230231_112230625_112230683_112233162_112233234_112233431
H1_mix_00013350	chr11	+	2536	22	NIC	ENSG00000149292.17	novel	2256	22	NA	NA	4	0	intron_retention	FALSE	canonical	2	3	junction_1	7.29861913445559	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCAGAATCAAGTACTCAT	8	True	NA	18	True	AATAAA	-18	NA	113314594	113366387	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_113314619_113315950_113316316_113323287_113323452_113323993_113324016_113324604_113324683_113325523_113325646_113329919_113329980_113334965_113335038_113338773_113338835_113339285_113339475_113340663_113340734_113341836_113341926_113344271_113344441_113350072_113350166_113351238_113351300_113352069_113352208_113359362_113359462_113359939_113360009_113362400_113362503_113363827_113363928_113364834_113365061_113366224
H1_mix_00013351	chr11	+	461	5	FSM	ENSG00000149292.17	ENST00000527781.1	519	5	0	58	0	-58	multi-exon	FALSE	canonical	3	30	junction_4	3.53553390593274	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGTGAGGCAGGGATGTA	1157	False	NA	NA	False	NA	NA	NA	113316240	113325645	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_113316316_113323287_113323452_113323993_113324016_113324604_113324683_113325523
H1_mix_00013357	chr11	+	1081	7	FSM	ENSG00000076043.11	ENST00000265881.10	1080	7	-1	0	0	0	multi-exon	TRUE	canonical	3	662	junction_4	79.7718970286877	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTTGTACCATCTATTC	-13	True	NA	32	True	AATAAA	-39	NA	114439465	114450279	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_114439676_114440655_114440740_114443855_114443934_114444540_114444653_114445978_114446088_114447825_114447880_114449845
H1_mix_00013369	chr11	+	1067	6	FSM	ENSG00000168092.14	ENST00000529887.6	1056	6	-11	0	0	0	multi-exon	FALSE	canonical	3	5	junction_5	88.8783438189529	2552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTTCATTGGAACAAGG	-3	True	NA	NA	False	AGTAAA	-27	NA	117144286	117176422	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_117144419_117152440_117152529_117159933_117160024_117161144_117161262_117163769_117163893_117175905
H1_mix_00013371	chr11	+	4403	26	FSM	ENSG00000149577.16	ENST00000324225.9	4396	26	-7	0	0	0	multi-exon	TRUE	canonical	2	9	junction_10	7.44515950131359	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTTGGGGCCCTTGTTTG	-4	True	NA	25	True	AATAAA	-13	NA	117178735	117197442	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_117179447_117181415_117181538_117181806_117181972_117182059_117182106_117182518_117182621_117182722_117182807_117183778_117183879_117184073_117184140_117186129_117186224_117186583_117186637_117187377_117187450_117187627_117187700_117188707_117188827_117189168_117189243_117189334_117189402_117189951_117190026_117190165_117190290_117190622_117190741_117191877_117192015_117192253_117192363_117192573_117192651_117192819_117192867_117193152_117193259_117193852_117193964_117195801_117195916_117196003
H1_mix_00013373	chr11	+	4474	5	FSM	ENSG00000149591.17_ENSG00000280143.1	ENST00000278968.10	1477	5	-315	-2682	-291	0	multi-exon	FALSE	canonical	3	36	junction_1	537.758019466005	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGCCTAGAGAATACCTAA	6495	False	NA	NA	False	ATTAAA	-18	NA	117199078	117207464	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_117199830_117203001_117203194_117203306_117203485_117203781_117203885_117204214
H1_mix_00013374	chr11	+	3786	5	FSM	ENSG00000149591.17	ENST00000392951.9	3786	5	0	0	0	0	multi-exon	FALSE	canonical	3	1162	junction_1	53.8348168010257	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGCCTAGAGAATACCTAA	-3	True	NA	NA	False	ATTAAA	-18	NA	117199369	117207464	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_117199433_117203001_117203194_117203306_117203485_117203781_117203885_117204214
H1_mix_00013375	chr11	+	2166	4	FSM	ENSG00000149591.17	ENST00000532870.5	2166	4	0	0	0	0	multi-exon	FALSE	canonical	3	1244	junction_3	23.6220236220354	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATCTTTTCTCAGGCCTG	216	False	NA	4	True	NA	NA	NA	117201872	117204778	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_117203194_117203306_117203485_117203781_117203885_117204214
H1_mix_00013376	chr11	+	5326	1	FSM	ENSG00000280143.1	ENST00000624094.1	5326	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACTACTGAAGAGGAA	261	False	NA	NA	False	ATTAAA	-15	NA	117204966	117210292	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_117205000_117210300
H1_mix_00013378	chr11	+	4483	15	FSM	ENSG00000167257.11	ENST00000300650.9	3477	15	-30	-976	16	976	multi-exon	FALSE	canonical	3	46	junction_1	12.0384163986695	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGTTAAGACTTTTTTT	-20	True	NA	8	True	AATACA	-33	NA	117232640	117287430	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_117232727_117234266_117234380_117238600_117239112_117239800_117239861_117244444_117244586_117246808_117246949_117279907_117280005_117280170_117280260_117281313_117281405_117281599_117281699_117281893_117282271_117282403_117282537_117282745_117282851_117283114_117283211_117285085
H1_mix_00013380	chr11	+	2842	13	FSM	ENSG00000167257.11	ENST00000530849.1	2846	13	4	0	4	0	multi-exon	FALSE	canonical	1	2	junction_2	29.2749181610015	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTAAGAGTTAACTTT	1435	False	NA	NA	False	ATTAAA	-6	NA	117234266	117286445	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_117234380_117238600_117238647_117239800_117239861_117244444_117244586_117246808_117246949_117279907_117280005_117280170_117280260_117281313_117281405_117281599_117281699_117281893_117282271_117282403_117282537_117283114_117283211_117285085
H1_mix_00013382	chr11	+	800	5	FSM	ENSG00000110274.16	ENST00000525416.5	778	5	-22	0	-22	0	multi-exon	FALSE	canonical	1	1	junction_2	18.1021407573801	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGGAGCTCAGTGGAGTC	46	False	NA	NA	False	NA	NA	NA	117327906	117361945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_117328209_117335604_117335681_117344165_117344278_117351789_117351989_117361834
H1_mix_00013390	chr11	+	6120	20	NNC	ENSG00000110344.10	novel	6088	20	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_8	58.3743293483515	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGTTATCACTTTATTC	-24	True	NA	15	True	AATAAA	-19	NA	118359585	118399211	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_118359675_118365039_118365202_118368630_118368805_118369422_118369536_118371513_118371667_118372506_118372667_118373085_118373289_118373493_118373704_118374895_118375230_118376573_118376695_118379445_118379751_118381390_118381524_118382588_118382777_118384634_118384736_118384831_118384946_118386437_118386613_118389724_118389906_118390656_118390805_118392737_118392896_118396313
H1_mix_00013392	chr11	+	1121	3	FSM	ENSG00000167283.9	ENST00000300688.8	1121	3	0	0	0	0	multi-exon	FALSE	canonical	3	6643	junction_1	273.5	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTCTTCTGGAGCGATT	0	True	NA	10	True	AATAAA	-17	NA	118401605	118409847	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_118401718_118406936_118407098_118408999
H1_mix_00013395	chr11	+	2812	2	FSM	ENSG00000118058.24	ENST00000529852.3	2860	2	48	0	-1	0	multi-exon	FALSE	canonical	3	21	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTGTTTGTTTAATTTT	17	True	NA	NA	False	AATAAA	-23	NA	118436503	118449995	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_118436945_118447624
H1_mix_00013397	chr11	+	12624	30	NIC	ENSG00000118058.24	novel	16600	36	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_26	19.7688786034166	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTAAGCTTCCTTTTG	NA	False	NA	11	True	AATAAA	-22	NA	118481987	118526832	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_118482093_118482421_118482496_118484182_118484315_118484861_118484976_118488613_118488761_118489791_118489888_118490128_118490250_118491195_118491310_118491743_118491929_118493056_118493231_118494287_118494399_118494693_118494768_118495699_118495894_118496260_118496368_118497935_118498074_118498369_118498490_118499302_118499421_118499834_118499914_118500986_118501148_118501671_118501858_118502397_118506647_118507528_118507610_118509135_118509201_118509947_118510119_118511950_118512026_118519617_118519793_118519956_118520065_118520801_118520886_118521287_118521418_118521896
H1_mix_00013401	chr11	+	1480	9	FSM	ENSG00000149582.16_ENSG00000172425.12	ENST00000354284.8	1456	9	-24	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	17.7182815193799	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTAAAAAAAAAGGAAGGAAG	170	False	NA	NA	False	NA	NA	NA	118531174	118546484	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_118531235_118531774_118531872_118532149_118532462_118532916_118533208_118533419_118533552_118533856_118533888_118534028_118534130_118534265_118534356_118546118
H1_mix_00013402	chr11	+	2437	9	FSM	ENSG00000149582.16	ENST00000313236.10	2420	9	-17	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	19.4036079119323	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACATATCTCTGCTTCAT	170	False	NA	15	True	AATAAA	-15	NA	118531174	118535829	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_118531235_118531774_118531872_118532149_118532462_118532916_118533208_118533419_118533552_118533856_118533888_118534028_118534130_118534265_118534356_118534506
H1_mix_00013403	chr11	+	2630	7	FSM	ENSG00000149582.16	ENST00000524725.5	2630	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	20.0866179886566	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACATATCTCTGCTTCAT	193	False	NA	15	True	AATAAA	-15	NA	118531389	118535829	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_118531872_118532149_118532462_118532916_118533208_118533856_118533888_118534028_118534130_118534265_118534356_118534506
H1_mix_00013406	chr11	+	3753	9	FSM	ENSG00000095139.15	ENST00000392859.7	1709	9	0	-2044	0	4	multi-exon	FALSE	canonical	3	22	junction_1	357.988041001372	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGAGAGTATTCATTGC	-18	True	NA	27	True	ATTAAA	-34	NA	118572389	118603037	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_118572551_118583178_118583359_118583808_118584015_118584479_118584645_118590340_118590507_118592708_118592857_118593589_118593699_118597706_118597912_118600624
H1_mix_00013407	chr11	+	4013	10	FSM	ENSG00000095139.15	ENST00000264028.5	3994	10	-19	0	0	0	multi-exon	FALSE	canonical	3	946	junction_3	89.8356524128614	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATCTGTGAGAGTATTCA	-18	True	NA	23	True	ATTAAA	-30	NA	118572389	118603033	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_118572551_118581245_118581510_118583178_118583359_118583808_118584015_118584479_118584645_118590340_118590507_118592708_118592857_118593589_118593699_118597706_118597912_118600624
H1_mix_00013411	chr11	+	4983	18	NIC	ENSG00000019144.20	novel	5242	18	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	76	junction_6	50.087881246374	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGAGTGGAAGGCCGGT	-42	True	NA	40	True	AATAAA	-15	NA	118621362	118658025	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_118621539_118624933_118625060_118627304_118628651_118631206_118631480_118631912_118632054_118632158_118632297_118635392_118635549_118638890_118639002_118639161_118639252_118643799_118643941_118644071_118644175_118645355_118645651_118645734_118645826_118647929_118648077_118650076_118650194_118650444_118650548_118655604_118655691_118656682
H1_mix_00013412	chr11	+	3128	15	FSM	ENSG00000019144.20	ENST00000534140.2	3128	15	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	62.1167432816496	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGAGTGGAAGGCCGGT	1929	False	NA	40	True	AATAAA	-15	NA	118631975	118658025	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_118632054_118632158_118632297_118634922_118635052_118635392_118635549_118638890_118639002_118639161_118639252_118643799_118643941_118644071_118644175_118645355_118645651_118645734_118645826_118647929_118648077_118650076_118650194_118650444_118650548_118655604_118655691_118656682
H1_mix_00013413	chr11	+	3087	13	NIC	ENSG00000019144.20	novel	3128	15	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_8	68.6079846341193	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGAGTGGAAGGCCGGT	30	False	NA	40	True	AATAAA	-15	NA	118635014	118658025	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_118635164_118635392_118635549_118638890_118639002_118639161_118639252_118643799_118643941_118644071_118644175_118645355_118645651_118645734_118645826_118647774_118648077_118650076_118650194_118650444_118650548_118655604_118655691_118656682
H1_mix_00013414	chr11	+	2917	13	NIC	ENSG00000019144.20	novel	3128	15	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_1	44.8431680662977	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGAGTGGAAGGCCGGT	45	False	NA	40	True	AATAAA	-15	NA	118635029	118658025	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_118635164_118635392_118635549_118638890_118639002_118639161_118639252_118643799_118643941_118644071_118644175_118645355_118645651_118645734_118645826_118647929_118648077_118650076_118650194_118650444_118650548_118655604_118655691_118656682
H1_mix_00013422	chr11	+	5383	8	NIC	ENSG00000186166.9	novel	1119	11	NA	NA	-3466	0	combination_of_known_junctions	FALSE	canonical	3	125	junction_2	48.851712313064	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACCCCTATTATACCTTC	7910	False	NA	-77	True	NA	NA	NA	119006067	119015641	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_119010831_119011220_119011312_119011938_119012004_119012148_119012255_119013231_119013263_119014993_119015084_119015306_119015440_119015537
H1_mix_00013424	chr11	+	1781	4	FSM	ENSG00000186166.9	ENST00000527356.1	1781	4	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_1	21.0607586652417	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTTGTATCTACCTCCT	5058	False	NA	4	True	ATTAAA	-16	NA	119011958	119015791	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_119013263_119014993_119015084_119015306_119015440_119015537
H1_mix_00013426	chr11	+	657	3	FSM	ENSG00000196655.12	ENST00000525303.5	654	3	-3	0	0	0	multi-exon	FALSE	canonical	2	24	junction_1	524.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATATTCCTTTGATCT	-9	True	NA	3	True	CATAAA	-7	NA	119018762	119023642	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_119018971_119021759_119021887_119023320
H1_mix_00013427	chr11	+	1399	5	FSM	ENSG00000196655.12	ENST00000533632.6	1425	5	-3	29	0	-29	multi-exon	FALSE	canonical	3	876	junction_2	100.131163980052	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTCTTCCCTCCATCAAG	-9	True	NA	NA	False	AGTAAA	-10	NA	119018762	119024105	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_119018971_119019142_119019318_119020149_119020254_119021759_119021887_119023320
H1_mix_00013428	chr11	+	822	4	FSM	ENSG00000196655.12	ENST00000533012.1	817	4	-5	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	502.260888383716	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTGTTTGCAATCTGT	18	True	NA	20	True	AATAAA	-12	NA	119018789	119023659	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_119018971_119019142_119019318_119021759_119021887_119023320
H1_mix_00013430	chr11	+	3201	16	FSM	ENSG00000160695.16	ENST00000621676.5	3181	16	-20	0	-20	0	multi-exon	FALSE	canonical	0	0	junction_1	29.2556547240586	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTAAGGATTTTTTTCTGG	-4	True	NA	18	True	AATAAA	-20	NA	119067797	119081972	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_119068011_119069195_119069345_119069441_119069578_119070233_119070398_119071595_119071844_119073197_119073400_119073799_119073952_119076896_119077084_119077500_119077648_119077877_119078067_119078172_119078335_119078564_119078705_119078794_119078998_119079128_119079301_119081091_119081315_119081458
H1_mix_00013431	chr11	+	1974	2	FSM	ENSG00000160695.16	ENST00000526829.1	1952	2	-22	0	-22	0	multi-exon	FALSE	canonical	3	86	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGCAAGTTTCTGGATGCC	4002	False	NA	NA	False	NA	NA	NA	119072009	119076928	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_119073952_119076896
H1_mix_00013435	chr11	+	1472	14	FSM	ENSG00000256269.11	ENST00000442944.7	1448	14	-24	0	-7	0	multi-exon	FALSE	canonical	2	2	junction_3	207.652873749273	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACCAATCCTACTAATAA	NA	False	NA	-20	True	GGGGCT	-39	NA	119084858	119093512	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_119085067_119088254_119088309_119088634_119088708_119089099_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092124_119092164_119092403_119092524_119092757_119092812_119092934_119093022_119093109
H1_mix_00013436	chr11	+	1688	14	FSM	ENSG00000256269.11	ENST00000537841.5	1559	14	-26	-103	-7	70	multi-exon	FALSE	canonical	3	16	junction_1	204.764780625515	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGACTTTTGCCCAGAG	NA	False	NA	87	True	NA	NA	NA	119084858	119093619	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_119085158_119088254_119088309_119088634_119088708_119089081_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092124_119092164_119092403_119092524_119092757_119092812_119092934_119093022_119093109
H1_mix_00013438	chr11	+	1368	12	FSM	ENSG00000256269.11	ENST00000543090.5	1347	12	-21	0	0	0	multi-exon	FALSE	canonical	2	12	junction_8	293.550001372484	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTCTGAAGGTGTTGTG	12	True	NA	1	True	AATAAA	-1	NA	119084908	119093533	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_119085067_119088634_119088708_119089081_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092403_119092524_119092757_119092812_119092934_119093022_119093109
H1_mix_00013439	chr11	+	1936	14	FSM	ENSG00000256269.11	ENST00000650101.1	1936	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	278.846652519448	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACCAATCCTACTAATAA	19	False	NA	-20	True	GGGGCT	-39	NA	119085221	119093512	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_119085894_119088254_119088309_119088634_119088708_119089099_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092124_119092164_119092403_119092524_119092757_119092812_119092934_119093022_119093109
H1_mix_00013440	chr11	+	962	8	FSM	ENSG00000256269.11	ENST00000544360.5	695	8	-267	0	0	0	multi-exon	FALSE	canonical	3	740	junction_7	44.9916091950397	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAACTGTACTTAGTACC	-3	True	NA	-82	True	NA	NA	NA	119087986	119091641	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_119088309_119088634_119088708_119089081_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412
H1_mix_00013441	chr11	+	1796	12	FSM	ENSG00000256269.11	ENST00000543543.5	1796	12	0	0	0	0	multi-exon	FALSE	canonical	3	664	junction_8	49.4879566282512	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCCTACTAATAAACCAGT	-3	True	NA	-14	True	GGGGCT	-45	NA	119087986	119093518	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_119088309_119088634_119088708_119089081_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092124_119092524_119092757_119092812_119092934_119093022_119093109
H1_mix_00013445	chr11	+	535	2	FSM	ENSG00000172273.13	ENST00000529610.1	535	2	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGCCAACAATACCAAGTT	9618	False	NA	NA	False	NA	NA	NA	119131209	119131927	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_119131647_119131829
H1_mix_00013446	chr11	+	963	8	FSM	ENSG00000172273.13	ENST00000529808.1	963	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	64.292698033355	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGCCCTCTCAGCCTCTC	9973	False	NA	NA	False	NA	NA	NA	119131564	119134293	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_119131647_119131829_119131983_119132242_119132298_119132495_119132574_119132660_119132782_119132863_119133003_119133094_119133220_119134083
H1_mix_00013449	chr11	+	3744	10	FSM	ENSG00000160703.16	ENST00000409991.5	3716	10	-28	0	-13	0	multi-exon	FALSE	canonical	3	33	junction_1	25.4252717673665	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAATTGTGGCCTCTTCTTT	333	False	NA	12	True	ATTAAA	-18	NA	119168699	119184012	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_119168895_119171355_119171474_119172355_119172426_119172900_119172990_119173478_119174099_119174452_119175275_119179692_119180289_119181170_119181258_119182093_119182346_119183117
H1_mix_00013452	chr11	+	4151	10	FSM	ENSG00000160703.16	ENST00000409109.6	4131	10	-24	4	-12	0	multi-exon	FALSE	canonical	3	38	junction_1	24.0066863114075	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAATTGTGGCCTCTTCTTT	334	False	NA	12	True	ATTAAA	-18	NA	119168700	119184012	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_119169303_119171355_119171474_119172355_119172426_119172900_119172990_119173478_119174099_119174452_119175275_119179692_119180289_119181170_119181258_119182093_119182346_119183117
H1_mix_00013453	chr11	+	3856	10	NIC	ENSG00000160703.16	novel	3716	10	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	25.4252717673665	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAATTGTGGCCTCTTCTTT	16	False	NA	12	True	ATTAAA	-18	NA	119168735	119184012	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_119169043_119171355_119171474_119172355_119172426_119172900_119172990_119173478_119174099_119174452_119175275_119179692_119180289_119181170_119181258_119182093_119182346_119183117
H1_mix_00013455	chr11	+	2850	9	FSM	ENSG00000160703.16	ENST00000525863.1	2850	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_8	31.5413914563071	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGCCTCTTCTTTACTG	2482	False	NA	16	True	ATTAAA	-22	NA	119171355	119184016	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_119171474_119172355_119172426_119172900_119172990_119173478_119174099_119174452_119175275_119179692_119180289_119181170_119181258_119182093_119182346_119183820
H1_mix_00013458	chr11	+	2811	2	Genic_Genomic	ENSG00000173456.5	novel	2783	1	NA	NA	-2	16982	multi-exon	FALSE	non_canonical	0	0	junction_1	0	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAAGCCCTGGTCACTCCA	0	True	NA	NA	False	AAAAAG	-1	NA	119334524	119354291	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr11_+_119337307_119354262
H1_mix_00013463	chr11	+	4094	3	FSM	ENSG00000181264.9	ENST00000375095.3	3980	3	-121	7	-118	0	multi-exon	FALSE	canonical	3	44	junction_1	12.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCAGAGTCTGTCTTTA	NA	False	NA	NA	False	AGTAAA	-13	NA	120325177	120333679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_120325369_120327440_120327641_120329976
H1_mix_00013464	chr11	+	4416	3	FSM	ENSG00000181264.9	ENST00000314475.6	1434	3	-118	-2864	-118	0	multi-exon	FALSE	canonical	3	14	junction_1	27.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGAGTCTGTCTTTATAT	NA	False	NA	NA	False	AGTAAA	-16	NA	120325177	120333682	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_120325369_120327121_120327641_120329976
H1_mix_00013472	chr11	+	5290	9	FSM	ENSG00000154114.13	ENST00000683345.1	5270	9	-20	0	10	0	multi-exon	FALSE	canonical	2	8	junction_1	17.6347490767518	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTGTTCTGATTTTTT	-22	True	NA	NA	False	ATTAAA	-17	NA	121024081	121090776	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_121024292_121036504_121036613_121045673_121045824_121047527_121047668_121053550_121053733_121055051_121055309_121058344_121058472_121059968_121060086_121086777
H1_mix_00013474	chr11	+	5161	8	FSM	ENSG00000154114.13	ENST00000422003.6	5142	8	-19	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	6.67006715995929	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTGTGTTCTGATTTTT	-2	True	NA	NA	False	ATTAAA	-16	NA	121024101	121090775	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_121024292_121045673_121045824_121047527_121047668_121053550_121053733_121055051_121055309_121058344_121058472_121059968_121060086_121086777
H1_mix_00013476	chr11	+	2403	2	FSM	ENSG00000109929.10	ENST00000524683.5	2391	2	-12	0	0	0	multi-exon	FALSE	canonical	3	517	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAGAAAAAAA	-14	True	NA	NA	False	NA	NA	NA	121292758	121305710	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_121292817_121303365
H1_mix_00013477	chr11	+	6866	5	FSM	ENSG00000109929.10	ENST00000264027.9	6854	5	-12	0	0	0	multi-exon	FALSE	canonical	3	517	junction_1	87.3194565947361	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGTGTGGCTATATGT	-14	True	NA	14	True	AATAAA	-25	NA	121292758	121313410	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_121292817_121303365_121303586_121304360_121304494_121306385_121306487_121307056
H1_mix_00013478	chr11	+	7035	5	FSM	ENSG00000109929.10	ENST00000392789.2	2258	5	0	-4777	0	0	multi-exon	FALSE	canonical	3	85	junction_1	272.607203683248	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGTGTGGCTATATGT	79	False	NA	14	True	AATAAA	-25	NA	121292851	121313410	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_121293079_121303365_121303586_121304360_121304494_121306385_121306487_121307056
H1_mix_00013482	chr11	+	5121	9	FSM	ENSG00000109944.11	ENST00000227349.7	7057	9	0	1936	0	-1936	multi-exon	FALSE	canonical	2	9	junction_5	1.72753437013566	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCAACTCTGAGAGACACA	-2	True	NA	NA	False	NA	NA	NA	122882758	122961926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_122882973_122885760_122886194_122903924_122904445_122924896_122925011_122934419_122935076_122946497_122946793_122956495_122956577_122957362_122957492_122959247
H1_mix_00013489	chr11	+	3423	18	FSM	ENSG00000110002.16	ENST00000392748.5	3419	18	-4	0	-4	0	multi-exon	FALSE	canonical	3	88	junction_12	61.0468082930481	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCAGTGGTTCTTAAAG	262	False	NA	17	True	ATTAAA	-27	NA	124115399	124146909	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_124115483_124117496_124117555_124117672_124117876_124118188_124118412_124118532_124118709_124118974_124119090_124122959_124123130_124123365_124123455_124123659_124123805_124124236_124124317_124134919_124135035_124136128_124136294_124136573_124136675_124137014_124137269_124141597_124141742_124142441_124142573_124145236_124145364_124145865
H1_mix_00013491	chr11	+	1622	8	FSM	ENSG00000154144.13	ENST00000473629.6	1634	8	12	0	12	0	multi-exon	FALSE	canonical	3	22	junction_3	69.2611149261714	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTCTGTTTACTTTCATC	1	True	NA	32	True	AATAAA	-11	NA	124622847	124632434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_124623234_124624930_124625002_124625670_124625904_124626812_124627051_124630387_124630486_124630744_124630856_124631274_124631418_124632092
H1_mix_00013492	chr11	+	4485	8	FSM	ENSG00000154144.13	ENST00000284290.8	4468	8	-17	0	-3	0	multi-exon	FALSE	canonical	3	85	junction_3	49.4912896892174	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTGTTTGGAGCTAC	-19	True	NA	14	True	AATAAA	-22	NA	124622857	124635398	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_124623234_124624930_124625002_124625670_124625904_124626903_124627051_124630387_124630486_124630744_124630856_124631274_124631418_124632092
H1_mix_00013495	chr11	+	4399	5	FSM	ENSG00000064199.7	ENST00000227135.7	3604	5	0	-795	0	795	multi-exon	FALSE	canonical	3	57	junction_1	13.2759180473518	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGACTTCCTATGAATTTG	-5	True	NA	8	True	AATAAA	-18	NA	124673903	124698313	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_124673953_124675237_124675419_124681388_124681460_124691695_124691783_124694302
H1_mix_00013496	chr11	+	1208	4	FSM	ENSG00000154146.13	ENST00000412681.2	1106	4	-102	0	1	0	multi-exon	FALSE	canonical	1	3	junction_2	2.49443825784929	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGAGGGTGCCGGGGGAG	-8	True	NA	7	True	AATAAA	-17	NA	124739942	124747206	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_124740100_124745502_124745730_124745961_124745983_124746403
H1_mix_00013498	chr11	+	1493	2	FSM	ENSG00000250073.4	ENST00000504932.2	1493	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAAAACATTGCTGGCGT	-22	True	NA	NA	False	AAAAAG	-11	NA	124759128	124765936	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_124759414_124764728
H1_mix_00013500	chr11	+	2188	9	FSM	ENSG00000154134.15	ENST00000529658.5	2272	9	84	0	68	0	multi-exon	FALSE	canonical	3	8	junction_1	32.2170374181116	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCAGGGCCCTGTCTGTCT	100	False	NA	14	True	AATAAA	-16	NA	124876553	124881466	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_124876933_124877518_124878132_124878297_124878437_124878583_124878797_124879189_124879342_124879464_124879576_124879786_124879949_124880417_124880609_124881238
H1_mix_00013506	chr11	+	1447	10	NIC	ENSG00000154134.15	novel	2139	12	NA	NA	10	-6	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	29.2954300569598	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATCAGAGCCCAGGGCCC	-1	True	NA	5	True	AATAAA	-7	NA	124876855	124881457	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_124876933_124877266_124877310_124877518_124877659_124878297_124878437_124878583_124878797_124879189_124879342_124879464_124879576_124879786_124879949_124880417_124880609_124881238
H1_mix_00013507	chr11	+	1264	8	NIC	ENSG00000154134.15	novel	1645	11	NA	NA	11	-6	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	37.1703195178791	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATCAGAGCCCAGGGCCC	0	True	NA	5	True	AATAAA	-7	NA	124876856	124881457	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_124876933_124877518_124877659_124878583_124878797_124879189_124879342_124879464_124879576_124879786_124879949_124880417_124880609_124881238
H1_mix_00013514	chr11	+	2210	11	FSM	ENSG00000149547.15	ENST00000278903.11	2191	11	-19	0	0	0	multi-exon	TRUE	canonical	3	1134	junction_9	82.8483554453557	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTAATGGTTGAATTTG	10	True	NA	22	True	ATTAAA	-22	NA	125569457	125584684	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_125569574_125572457_125572570_125575262_125575409_125576254_125576316_125577503_125577571_125578132_125578258_125578948_125579069_125580092_125580205_125581210_125581323_125582345_125582421_125583520
H1_mix_00013517	chr11	+	4195	19	FSM	ENSG00000134910.14	ENST00000649491.1	4173	19	-22	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	383.137361339665	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTGATGTCTTTCATAT	-16	True	NA	-20	True	AATGAA	-11	NA	125592835	125622721	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_125592919_125594049_125594098_125595880_125596004_125597058_125597120_125602302_125602425_125602802_125602949_125604156_125604248_125605628_125605736_125606300_125606466_125608108_125608290_125609433_125609590_125611427_125611520_125612591_125612748_125612988_125613178_125614086_125614204_125614323_125614427_125618372_125618562_125620010_125620127_125620771
H1_mix_00013529	chr11	+	7071	12	FSM	ENSG00000109832.14	ENST00000263576.11	7424	12	0	353	0	-353	multi-exon	TRUE	canonical	3	86	junction_9	12.4322959854998	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGTCGAAAACTAGAAGCAC	14	True	NA	NA	False	NA	NA	NA	125904507	125928490	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_125904581_125905211_125905279_125905552_125905598_125906073_125906210_125908195_125908289_125908400_125908504_125910363_125910479_125911310_125911489_125917013_125917252_125918627_125918791_125921190_125921380_125922819
H1_mix_00013531	chr11	+	2025	9	FSM	ENSG00000197798.9	ENST00000533050.6	2016	9	-9	0	0	0	multi-exon	TRUE	canonical	3	341	junction_7	65.9506207324844	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTATTTCTCTGGGCAG	-14	True	NA	-15	True	TATAAA	-1	NA	126211772	126262968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_126211831_126229224_126229294_126234994_126235088_126240791_126241045_126250505_126250734_126254304_126254434_126256566_126256853_126261424_126261485_126262119
H1_mix_00013532	chr11	+	1944	9	NIC	ENSG00000197798.9	novel	2016	9	NA	NA	6	-16	combination_of_known_junctions	FALSE	canonical	3	160	junction_7	112.9491035821	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTATAAAAGAACTCCAAGA	1	True	NA	-11	True	NA	NA	NA	126211787	126262905	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_126211831_126229224_126229294_126234994_126235088_126240791_126241045_126250505_126250734_126254304_126254434_126256566_126256853_126261427_126261485_126262119
H1_mix_00013539	chr11	+	2400	9	FSM	ENSG00000110074.12	ENST00000534315.5	2210	9	-247	57	-247	0	multi-exon	FALSE	canonical	3	22	junction_3	102.100364225599	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGATTTTCGTCTGTTTA	1547	False	NA	-40	True	NA	NA	NA	126270697	126278069	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_126271658_126272968_126273080_126273335_126273455_126275326_126275429_126275793_126275871_126276058_126276220_126276393_126276524_126277070_126277176_126277434
H1_mix_00013546	chr11	+	2530	16	FSM	ENSG00000084234.18	ENST00000528499.5	2530	16	0	0	0	0	multi-exon	FALSE	canonical	3	1447	junction_6	457.491546977161	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATATGCAGGCTGTCGTT	-2	True	NA	21	True	AATAAA	-28	NA	130069893	130143806	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_130070083_130109428_130109603_130110537_130110662_130120705_130120819_130121613_130121811_130122304_130122514_130126699_130126831_130127765_130127841_130129047_130129207_130130037_130130167_130133628_130133729_130135562_130135716_130140397_130140484_130141497_130141573_130141918_130142075_130143346
H1_mix_00013548	chr11	+	3739	18	FSM	ENSG00000084234.18	ENST00000263574.9	3727	18	-12	0	0	0	multi-exon	FALSE	canonical	3	510	junction_14	878.360134541383	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTCGTTTCACTGACTGC	-2	True	NA	36	True	AATAAA	-21	NA	130069893	130144811	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_130070083_130109428_130109603_130110537_130110662_130120705_130120819_130121613_130121811_130122304_130122514_130123611_130123780_130126699_130126831_130127765_130127841_130129047_130129207_130130037_130130167_130133628_130133729_130135562_130135716_130137255_130137292_130140397_130140484_130141497_130141573_130141918_130142075_130143346
H1_mix_00013549	chr11	+	3687	17	FSM	ENSG00000084234.18	ENST00000278756.7	3687	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	853.475166232152	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGAGACTGCTCGTTTCAC	143	False	NA	29	True	AATAAA	-14	NA	130070567	130144804	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_130070748_130109428_130109603_130110537_130110662_130120705_130120819_130121613_130121811_130122304_130122514_130123611_130123780_130126699_130126831_130127765_130127841_130129047_130129207_130130037_130130167_130133628_130133729_130135562_130135716_130140397_130140484_130141497_130141573_130141918_130142075_130143346
H1_mix_00013550	chr11	+	4612	3	FSM	ENSG00000084234.18	ENST00000530493.1	1322	3	-1913	-1377	-196	0	multi-exon	FALSE	canonical	3	2935	junction_1	214.5	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTCGTTTCACTGACTGC	NA	False	NA	36	True	AATAAA	-21	NA	130138581	130144811	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_130141573_130141918_130142075_130143346
H1_mix_00013558	chr11	+	2615	8	FSM	ENSG00000182667.15	ENST00000425719.6	1607	8	148	-1156	142	0	multi-exon	TRUE	canonical	3	15	junction_7	5.72855361593241	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGTGTGGTACCTCATT	181	False	NA	8	True	ATTAAA	-22	NA	131911609	132336821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_131911649_132146281_132146515_132212021_132212148_132307688_132307824_132310111_132310233_132314551_132314704_132330152_132330186_132335045
H1_mix_00013565	chr11	+	1810	8	FSM	ENSG00000151498.12	ENST00000374752.6	1797	8	-13	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	142.810420931144	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAGGCTCCTTAAAT	-14	True	NA	34	True	AATAAA	-23	NA	134253547	134265850	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_134253710_134259007_134259085_134259607_134259746_134261043_134261180_134261274_134261373_134261737_134261891_134262519_134262623_134264907
H1_mix_00013567	chr11	+	2013	10	NIC	ENSG00000151498.12	novel	2176	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_2	123.226079490774	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGCTCCTTAAATTATTA	-1	True	NA	39	True	AATAAA	-28	NA	134253560	134265855	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_134253710_134256547_134256649_134258514_134258625_134259007_134259085_134259607_134259746_134261043_134261180_134261274_134261373_134261737_134261891_134262519_134262623_134264907
H1_mix_00013569	chr11	+	5706	20	FSM	ENSG00000166105.16	ENST00000431683.7	2946	20	-2766	6	-632	0	multi-exon	TRUE	canonical	1	26	junction_11	39.2496096280674	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCATTTCTGCCTCCCAT	NA	False	NA	8	True	AATAAA	-11	NA	134273612	134319558	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_134276764_134277325_134277452_134277699_134277913_134281376_134281446_134282024_134282121_134283736_134283846_134288797_134288891_134292131_134292214_134293144_134293210_134307123_134307209_134309625_134309764_134310570_134310652_134311063_134311171_134312348_134312490_134312815_134312888_134313395_134313475_134313940_134314029_134314329_134314442_134318630_134318748_134318876
H1_mix_00013574	chr11	+	3342	19	FSM	ENSG00000149328.15	ENST00000535456.7	3251	19	-91	0	23	0	multi-exon	FALSE	canonical	2	23	junction_10	17.1276975887408	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCTCTGGTGATAGTCTC	NA	False	NA	20	True	AGTAAA	-20	NA	134331896	134376324	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_134332148_134342753_134342952_134344386_134344456_134345033_134345130_134347324_134347434_134356300_134356394_134359059_134359142_134364327_134364399_134367256_134367342_134368643_134368782_134369804_134369886_134370292_134370400_134371007_134371149_134371420_134371493_134371751_134371831_134373720_134373809_134374144_134374257_134374601_134374719_134374971
H1_mix_00013575	chr11	-	2821	4	FSM	ENSG00000177951.18	ENST00000382762.8	2792	4	-29	0	-29	0	multi-exon	FALSE	canonical	3	253	junction_1	24.5809320861155	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATATGGTCTCTGTCGTCC	1261	False	NA	-4	True	AATAAA	-35	NA	207428	202923	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_205470_205610_205668_205951_206044_207302
H1_mix_00013577	chr11	-	2882	7	FSM	ENSG00000142082.15	ENST00000382743.9	2882	7	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_6	27.1825107171668	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGAGGGGCATTTTCCTTG	2	True	NA	NA	False	TATAAA	-17	NA	236342	215029	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_216719_218831_219042_224077_224240_230451_230553_232982_233216_233342_233535_236047
H1_mix_00013578	chr11	-	1996	7	FSM	ENSG00000142082.15	ENST00000532837.5	1588	7	-11	-397	0	363	multi-exon	FALSE	canonical	3	42	junction_6	61.0584874435069	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGTGGAATCCACTGAAC	-10	True	NA	NA	False	NA	NA	NA	236354	215781	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_216719_218831_219042_224077_224240_230451_230553_232982_233216_233342_233535_236193
H1_mix_00013581	chr11	-	2822	1	FSM	ENSG00000277290.1	ENST00000620253.1	385	1	-522	-1915	-522	1915	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCGACAGTGCGAGACTC	NA	False	NA	NA	False	NA	NA	NA	244005	241183	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_241200_244000
H1_mix_00013582	chr11	-	423	2	Antisense	novelGene_ENSG00000255026.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	0	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGTGTGCTTAGCTGCT	9977	False	NA	-2	True	AATACA	-23	NA	288416	283055	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr11_-_283244_288181
H1_mix_00013583	chr11	-	588	2	FSM	ENSG00000142089.17	ENST00000679382.1	587	2	0	-1	0	1	multi-exon	FALSE	canonical	3	124	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGCGACTTCACCTGGG	15	True	NA	-17	True	AATAAA	-19	NA	320841	319674	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_319986_320564
H1_mix_00013584	chr11	-	612	2	FSM	ENSG00000142089.17	ENST00000399808.5	611	2	0	-1	0	1	multi-exon	FALSE	canonical	3	5145	junction_1	0	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGCGACTTCACCTGGG	-4	True	NA	-17	True	AATAAA	-19	NA	320860	319674	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_319991_320564
H1_mix_00013585	chr11	-	614	3	FSM	ENSG00000185187.13	ENST00000526395.5	608	3	0	-6	0	6	multi-exon	FALSE	canonical	3	22	junction_2	107	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCGGTCTCCTCCCTTGCG	14	True	NA	0	True	AATAAA	-23	NA	407135	405709	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_406060_406348_406539_407061
H1_mix_00013586	chr11	-	821	4	FSM	ENSG00000185187.13	ENST00000527987.1	803	4	0	-18	0	6	multi-exon	FALSE	canonical	3	172	junction_3	36.1509182302316	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCGGTCTCCTCCCTTGCG	-42	True	NA	0	True	AATAAA	-23	NA	407191	405709	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_406060_406348_406539_406842_406994_407061
H1_mix_00013587	chr11	-	1499	8	NIC	ENSG00000185187.13	novel	1743	10	NA	NA	-89	6	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	65.916459187647	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCGGTCTCCTCCCTTGCG	7323	False	NA	0	True	AATAAA	-23	NA	410105	405709	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_406060_406348_406539_407061_407165_407424_407569_407816_407958_408072_408207_408694_408894_409867
H1_mix_00013588	chr11	-	1426	8	NIC	ENSG00000185187.13	novel	1639	10	NA	NA	-83	5	combination_of_known_splicesites	FALSE	canonical	3	13	junction_7	74.2999986266377	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCGGTCTCCTCCCTTGC	NA	False	NA	-1	True	AATAAA	-22	NA	417538	405710	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_406060_406348_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_417324
H1_mix_00013589	chr11	-	1645	10	FSM	ENSG00000185187.13	ENST00000332725.7	1639	10	0	-6	0	6	multi-exon	TRUE	canonical	3	30	junction_9	67.107063895624	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCGGTCTCCTCCCTTGCG	0	True	NA	0	True	AATAAA	-23	NA	417397	405709	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_406060_406348_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_408694_408894_409867_410028_417324
H1_mix_00013590	chr11	-	1734	10	FSM	ENSG00000185187.13	ENST00000397632.7	1598	10	-130	-6	0	6	multi-exon	FALSE	canonical	3	53	junction_9	62.4792311171293	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCGGTCTCCTCCCTTGCG	NA	False	NA	0	True	AATAAA	-23	NA	417455	405709	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_406060_406348_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_408694_408894_409867_410028_417293
H1_mix_00013591	chr11	-	1993	10	NIC	ENSG00000185187.13	novel	1598	10	NA	NA	-52	6	combination_of_known_junctions	FALSE	canonical	3	53	junction_9	60.8661758123894	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCGGTCTCCTCCCTTGCG	NA	False	NA	0	True	AATAAA	-23	NA	417507	405709	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_406060_406141_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_408694_408894_409867_410028_417293
H1_mix_00013592	chr11	-	1350	8	NNC	ENSG00000185187.13	novel	1598	10	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	92.2565190440353	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTCGGTCTCCTCC	12	True	NA	-6	True	AATAAA	-17	NA	417331	405715	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_406060_406348_406539_406842_406994_407061_407270_407424_407569_407816_407958_408072_408207_417293
H1_mix_00013593	chr11	-	1609	9	NIC	ENSG00000185187.13	novel	1639	10	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	78.4585878027383	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTCGGTCTCCTCC	-16	True	NA	-6	True	AATAAA	-17	NA	417359	405715	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_406060_406141_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_409867_410028_417324
H1_mix_00013594	chr11	-	1510	9	NIC	ENSG00000185187.13	novel	1639	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_8	72.628764962651	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTCGGTCTCCTCC	0	True	NA	-6	True	AATAAA	-17	NA	417397	405715	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_406060_406348_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_408694_408894_417293
H1_mix_00013596	chr11	-	701	2	FSM	ENSG00000185187.13	ENST00000534145.1	701	2	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGATTCTTCGAGGCCGA	7837	False	NA	NA	False	NA	NA	NA	407195	406426	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_406994_407061
H1_mix_00013599	chr11	-	2931	11	FSM	ENSG00000185101.13	ENST00000526142.5	2868	11	-60	-3	48	3	multi-exon	FALSE	canonical	3	18	junction_3	7.98811617341661	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTGGCCTCGCTGGGTC	NA	False	NA	-10	True	AGTAAA	-21	NA	429818	417929	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_418590_418719_418990_419581_420616_420717_420861_420944_421043_421140_421199_428087_428200_428357_428395_428474_428640_428721_428827_429569
H1_mix_00013600	chr11	-	5495	16	FSM	ENSG00000185101.13	ENST00000532094.5	5487	16	0	-8	0	3	multi-exon	FALSE	canonical	3	24	junction_10	7.10555338371959	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTGGCCTCGCTGGGTC	0	True	NA	-10	True	AGTAAA	-21	NA	441996	417929	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_418590_418719_418814_418887_418990_419581_420861_420944_421043_421140_421199_428087_428200_428357_428395_428474_428640_428721_428827_429569_430180_430268_430404_431693_433460_433814_433938_434023_434099_441920
H1_mix_00013601	chr11	-	2883	23	FSM	ENSG00000185101.13	ENST00000332826.7	2867	23	0	-16	0	11	multi-exon	FALSE	canonical	3	17	junction_4	8.81958751682538	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCGCTGGGTCCCGGGTGG	-15	True	NA	-2	True	AGTAAA	-29	NA	442011	417921	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_418590_418719_418814_418887_418990_419581_419730_420462_420616_420717_420861_420944_421043_421140_421199_428087_428200_428357_428395_428474_428640_428721_428827_429569_429653_429757_429819_430082_430180_430268_430404_431693_431768_431847_431907_431998_432055_433313_433460_433814_433938_434023_434099_441920
H1_mix_00013603	chr11	-	3538	11	FSM	ENSG00000023191.17	ENST00000397615.6	2014	11	-21	-1503	0	1500	multi-exon	FALSE	canonical	3	53	junction_9	127.653006231737	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGATGGACAGCGTGGGT	405	False	NA	NA	False	NA	NA	NA	506821	493011	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502250_504823_504997_506608
H1_mix_00013604	chr11	-	3410	10	FSM	ENSG00000023191.17	ENST00000397614.5	1864	10	-45	-1501	-45	1500	multi-exon	FALSE	canonical	3	20	junction_9	120.382723012898	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGATGGACAGCGTGGGT	360	False	NA	NA	False	NA	NA	NA	506866	493011	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502250_506608
H1_mix_00013605	chr11	-	2816	9	FSM	ENSG00000023191.17	ENST00000534797.5	2973	9	157	0	157	0	multi-exon	FALSE	canonical	3	321	junction_6	40.7737660757502	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGCTCTTGTCCTTCCTGG	3813	False	NA	-1	True	ATTAAA	-18	NA	503413	494511	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061
H1_mix_00013606	chr11	-	3285	9	FSM	ENSG00000023191.17	ENST00000525522.5	3281	9	0	-4	0	0	multi-exon	FALSE	canonical	3	112	junction_8	98.3850058443867	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGCTCTTGTCCTTCCTGG	1345	False	NA	-1	True	ATTAAA	-18	NA	505881	494511	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_500000_500483_500655_502061_502182_504823
H1_mix_00013607	chr11	-	1968	11	NIC	ENSG00000023191.17	novel	2014	11	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	104	junction_10	115.901682472689	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGCTCTTGTCCTTCCTGG	407	False	NA	-1	True	ATTAAA	-18	NA	506819	494511	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502182_504823_504997_506608
H1_mix_00013608	chr11	-	1725	10	FSM	ENSG00000023191.17	ENST00000397604.7	1722	10	0	-3	0	0	multi-exon	FALSE	canonical	3	112	junction_9	93.4409432558512	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGCTCTTGTCCTTCCTGG	-27	True	NA	-1	True	ATTAAA	-18	NA	507253	494511	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502182_507112
H1_mix_00013610	chr11	-	1729	10	FSM	ENSG00000023191.17	ENST00000438658.6	1725	10	0	-4	0	0	multi-exon	FALSE	canonical	3	48	junction_9	112.079116676845	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATAATCATTAAAGCACT	-9	True	NA	-33	True	NA	NA	NA	506785	494543	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502182_506608
H1_mix_00013612	chr11	-	1808	10	FSM	ENSG00000023191.17	ENST00000356187.9	1791	10	0	-17	0	0	multi-exon	FALSE	canonical	3	91	junction_9	99.4932840961987	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATAATCATTAAAGCACT	NA	False	NA	-33	True	NA	NA	NA	507300	494543	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502250_507112
H1_mix_00013615	chr11	-	1114	7	FSM	ENSG00000174775.18	ENST00000493230.5	1114	7	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	115.313220789677	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTTTCGGCTGAGGG	15	True	NA	-5	True	AGTAAA	-18	NA	535538	532241	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_532523_532630_532756_533276_533359_533452_533613_533765_533945_534211_534376_535415
H1_mix_00013616	chr11	-	1213	5	FSM	ENSG00000174775.18	ENST00000451590.5	1151	5	-61	-1	-31	0	multi-exon	FALSE	canonical	3	276	junction_4	7.43303437365925	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTTTCGGCTGAGGG	NA	False	NA	-5	True	AGTAAA	-18	NA	535611	532241	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_532756_533452_533613_533765_533945_534211_534376_535415
H1_mix_00013617	chr11	-	1070	6	FSM	ENSG00000174775.18	ENST00000311189.8	1070	6	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_5	9.09065454189081	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTTTCGGCTGAGGG	-23	True	NA	-5	True	AGTAAA	-18	NA	535576	532241	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_532523_532630_532756_533452_533613_533765_533945_534211_534376_535415
H1_mix_00013618	chr11	-	1264	6	FSM	ENSG00000174775.18	ENST00000417302.6	1244	6	0	-20	0	0	multi-exon	FALSE	canonical	3	41	junction_1	118.036265613582	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTTTCGGCTGAGGG	-27	True	NA	-5	True	AGTAAA	-18	NA	535580	532241	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_532756_533276_533359_533452_533613_533765_533945_534211_534376_535415
H1_mix_00013620	chr11	-	2057	14	FSM	ENSG00000185522.9	ENST00000329451.8	2057	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_13	6.37487672464636	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGGAAATGTTGGTTTG	-15	True	NA	-7	True	AGTAAA	-21	NA	560738	554849	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_555112_555304_555504_555733_555931_555995_556116_556191_556376_556491_556589_556834_557098_557398_557488_557571_557641_557883_558040_558160_558249_558613_558767_558855_558980_560682
H1_mix_00013621	chr11	-	2259	2	FSM	ENSG00000247095.4	ENST00000665964.2	2295	2	32	4	10	-1	multi-exon	FALSE	canonical	3	43	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTTGTTTTTTGTTGTT	-3	True	NA	-4	True	TATAAA	-15	NA	568417	565660	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_567854_568351
H1_mix_00013622	chr11	-	2006	2	FSM	ENSG00000247095.4	ENST00000500447.2	1992	2	-15	1	-5	-1	multi-exon	FALSE	canonical	3	15	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTTGTTTTTTGTTGTT	7385	False	NA	-4	True	TATAAA	-15	NA	568462	565660	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_567556_568351
H1_mix_00013623	chr11	-	1972	9	FSM	ENSG00000185507.21	ENST00000397566.5	2051	9	81	-2	0	0	multi-exon	TRUE	canonical	3	36	junction_5	12.9608786353395	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGCATCTTGGCTGGTG	-2	True	NA	-3	True	AATAAA	-18	NA	615647	612552	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_612801_612998_613118_613205_613596_613784_613866_613950_614038_614173_614400_614475_614535_614796_615008_615096
H1_mix_00013624	chr11	-	1885	8	FSM	ENSG00000185507.21	ENST00000397570.5	1943	8	81	-23	0	0	multi-exon	FALSE	canonical	1	5	junction_4	22.4417613627189	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGCATCTTGGCTGGTG	-2	True	NA	-3	True	AATAAA	-18	NA	615647	612552	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_612801_612998_613118_613205_613596_613784_613866_614173_614400_614475_614535_614796_615008_615096
H1_mix_00013625	chr11	-	1809	10	FSM	ENSG00000185507.21	ENST00000348655.11	1807	10	0	-2	0	0	multi-exon	FALSE	canonical	1	5	junction_4	19.9598362149692	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGCATCTTGGCTGGTG	9247	False	NA	-3	True	AATAAA	-18	NA	615921	612552	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_612801_612998_613118_613205_613596_613784_613866_614173_614400_614475_614535_614796_615008_615096_615260_615344_615648_615912
H1_mix_00013626	chr11	-	1925	11	FSM	ENSG00000185507.21	ENST00000525445.6	1923	11	0	-2	0	0	multi-exon	FALSE	canonical	3	36	junction_5	11.7029910706622	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGCATCTTGGCTGGTG	-1	True	NA	-3	True	AATAAA	-18	NA	615950	612552	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_612801_612998_613118_613205_613596_613784_613866_613950_614038_614173_614400_614475_614535_614796_615008_615096_615260_615344_615648_615912
H1_mix_00013629	chr11	-	526	4	FSM	ENSG00000070031.4	ENST00000176195.4	526	4	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_3	2.49443825784929	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGGAGTTGTCTGTGTC	-1	True	NA	-7	True	AATAAA	-19	NA	627181	626308	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_626531_626696_626790_626887_626990_627072
H1_mix_00013632	chr11	-	2204	12	FSM	ENSG00000177030.19	ENST00000382409.4	2190	12	0	-14	0	14	multi-exon	FALSE	canonical	0	0	junction_11	158.498324938355	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGGTTGCAGTGCCAGCC	1	True	NA	-1	True	AATAAA	-29	NA	695222	644218	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_644655_653961_654052_674535_674784_678693_678823_679687_679817_680962_681090_684897_684964_686857_686998_687910_688058_688330_688461_691500_691599_694758
H1_mix_00013636	chr11	-	1066	9	NNC	ENSG00000177225.17	novel	4363	8	NA	NA	5	532	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	22.5246392867899	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTATGAGATTTCATTTT	21	False	NA	NA	False	AATAGA	-22	NA	777466	766687	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_767014_767293_767374_770992_771105_771332_771427_772426_772522_773521_773630_774007_774114_775065_775143_777398
H1_mix_00013637	chr11	-	706	7	NIC	ENSG00000177225.17	novel	790	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	17.2916164657906	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCCTGGTGTTCGCAG	15	True	NA	-30	True	AATAAA	-21	NA	777472	767221	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_767374_771332_771427_772426_772522_773521_773630_774007_774114_775065_775143_777398
H1_mix_00013638	chr11	-	4365	8	FSM	ENSG00000177225.17	ENST00000319863.13	4363	8	0	-2	0	0	multi-exon	FALSE	canonical	3	25	junction_1	12.8364913509916	1815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCCTGGTGTTCGCAGCA	0	True	NA	-28	True	AATAAA	-23	NA	777487	767219	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_770904_770992_771105_771332_771427_772426_772522_773521_773630_774007_774114_775065_775143_777398
H1_mix_00013641	chr11	-	1610	2	FSM	ENSG00000184524.6	ENST00000330106.5	1605	2	0	-5	0	5	multi-exon	FALSE	canonical	3	44	junction_1	0	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGCATCCTCATCTGCA	3	True	NA	0	True	AATAAA	-20	NA	790090	787109	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_788659_790029
H1_mix_00013642	chr11	-	2796	10	FSM	ENSG00000177542.11	ENST00000320230.9	2796	10	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_9	128.231561377585	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTGTCTGTCTGGGGG	8978	False	NA	-6	True	AATAAA	-18	NA	796263	790474	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_792069_792141_792218_792303_792459_792552_792728_792869_792989_793528_793620_794457_794514_794775_794902_794986_795170_796042
H1_mix_00013643	chr11	-	2642	10	FSM	ENSG00000177542.11	ENST00000628067.3	2640	10	0	-2	0	2	multi-exon	FALSE	canonical	3	313	junction_9	51.9358578761662	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTCTGTCTGGGGGTC	-10	True	NA	-4	True	AATAAA	-20	NA	798281	790472	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_792069_792141_792218_792303_792459_792552_792728_792869_792989_793528_793620_794457_794514_794775_794902_794986_795170_798216
H1_mix_00013650	chr11	-	1937	13	FSM	ENSG00000177595.19	ENST00000531286.5	1937	13	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_6	33.8586727770334	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCAGAGCTTGATTTATT	7244	False	NA	-13	True	NA	NA	NA	802750	799184	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_799566_799814_800015_800130_800245_800383_800452_800542_800667_800761_800913_801001_801121_801217_801366_801444_801625_801964_802091_802194_802397_802542_802598_802681
H1_mix_00013652	chr11	-	3913	14	FSM	ENSG00000177595.19	ENST00000524486.5	3917	14	0	4	0	0	multi-exon	TRUE	canonical	3	37	junction_13	26.3602713439267	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGAGCTTGATTTATTT	7737	False	NA	-12	True	NA	NA	NA	805103	799183	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_799566_799814_800015_800130_800245_800332_800452_800542_800667_800761_800913_800984_801121_801217_801366_801444_801625_801964_802091_802194_802397_802542_802598_802681_803648_804093
H1_mix_00013653	chr11	-	4496	10	FSM	ENSG00000177595.19	ENST00000527357.5	4496	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	29.2515695474218	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCAGAGCTTGATTTATT	11	True	NA	-13	True	NA	NA	NA	805230	799184	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_800245_800383_800452_800542_800667_800761_801121_801217_801366_801444_802091_802194_802397_802542_802598_802681_804464_805178
H1_mix_00013654	chr11	-	2984	16	FSM	ENSG00000177595.19	ENST00000347755.10	2984	16	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_15	29.8281000996637	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGAGCTTGATTTATTT	10	True	NA	-12	True	NA	NA	NA	805231	799183	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_799566_799814_800015_800130_800245_800332_800452_800542_800667_800761_800913_800984_801121_801217_801366_801444_801625_801964_802091_802194_802397_802542_802598_802681_802892_803173_803588_804093_804464_805178
H1_mix_00013655	chr11	-	2979	16	NIC	ENSG00000177595.19	novel	2984	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_15	32.4075437034171	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCAGAGCTTGATTTATT	3380	False	NA	-13	True	NA	NA	NA	809460	799184	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_799566_799814_800015_800130_800245_800332_800452_800542_800667_800761_800913_800984_801121_801217_801366_801444_801625_801964_802091_802194_802397_802542_802598_802681_802892_803173_803588_804093_804464_809411
H1_mix_00013656	chr11	-	3994	12	FSM	ENSG00000177595.19	ENST00000534525.5	3994	12	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_11	31.7927170827555	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCAGAGCTTGATTTATT	1	True	NA	-13	True	NA	NA	NA	809499	799184	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_799566_799814_800245_800332_800452_800542_800667_800761_801121_801217_801366_801444_801625_801964_802091_802194_802397_802542_802598_802681_804464_809411
H1_mix_00013657	chr11	-	3720	13	ISM	ENSG00000177595.19	ENST00000524486.5	3917	14	636	7	2	-2	intron_retention	FALSE	canonical	3	79	junction_3	20.2703943940144	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCTCAGAGCTTGATTTA	8373	False	NA	-15	True	NA	NA	NA	804467	799186	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_799566_799814_800015_800130_800245_800332_800452_800542_800667_800761_800913_800984_801121_801217_801366_801444_801625_801964_802091_802194_802397_802542_802598_802681
H1_mix_00013658	chr11	-	2973	16	NIC	ENSG00000177595.19	novel	2984	16	NA	NA	11	-4	combination_of_known_junctions	FALSE	canonical	3	13	junction_13	38.7292596825134	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACCTCAGAGCTTGATT	-10	True	NA	-17	True	NA	NA	NA	805219	799188	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_799566_799814_800015_800130_800245_800332_800452_800542_800667_800761_800913_801001_801121_801217_801366_801444_801625_801964_802091_802194_802397_802542_802598_802681_802855_803173_803648_804093_804464_805178
H1_mix_00013659	chr11	-	2935	16	NIC	ENSG00000177595.19	novel	2984	16	NA	NA	10	-4	combination_of_known_junctions	TRUE	canonical	2	9	junction_6	36.3165098665729	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACCTCAGAGCTTGATT	-11	True	NA	-17	True	NA	NA	NA	805220	799188	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_799566_799814_800015_800130_800245_800332_800452_800542_800667_800761_800913_801017_801121_801217_801366_801444_801625_801964_802091_802194_802397_802542_802598_802681_802892_803173_803588_804093_804464_805178
H1_mix_00013661	chr11	-	876	2	FSM	ENSG00000177700.6	ENST00000322028.5	876	2	0	0	0	0	multi-exon	FALSE	canonical	3	3328	junction_1	0	888	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAACTGTGTTTGCACCAC	-6	True	NA	-2	True	GGGGCT	-42	NA	842529	839720	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_840481_842413
H1_mix_00013662	chr11	-	3249	13	FSM	ENSG00000177830.18	ENST00000323578.13	3260	13	0	11	0	-10	multi-exon	FALSE	canonical	3	362	junction_12	91.9188576348123	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCCTGTGACAGGTGCTT	11	True	NA	NA	False	NA	NA	NA	910810	867869	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_869957_870120_870164_870418_870500_883147_883304_884067_884170_893426_893520_899339_899402_900003_900111_900935_900981_902197_902331_902961_903112_904705_904860_910774
H1_mix_00013663	chr11	-	2648	12	FSM	ENSG00000177830.18	ENST00000429789.6	1289	12	4	-1363	0	0	multi-exon	FALSE	canonical	3	129	junction_5	160.612361225755	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACATGGTGGCATGTGCC	-10	True	NA	-23	True	AATAGA	-10	NA	910831	868398	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_869957_870120_870164_870418_870500_883147_883304_884067_884170_899339_899402_900003_900111_900935_900981_902197_902331_902961_903112_904705_904860_910774
H1_mix_00013664	chr11	-	2845	14	FSM	ENSG00000177830.18	ENST00000436108.6	1477	14	0	-1368	0	0	multi-exon	FALSE	canonical	0	0	junction_12	207.24998483237	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACATGGTGGCATGTGCC	-10	True	NA	-23	True	AATAGA	-10	NA	910831	868398	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_869957_870120_870164_870418_870500_883147_883304_884067_884170_893426_893520_899339_899402_900003_900111_900935_900981_902197_902331_902961_903112_904705_904860_908541_908646_910774
H1_mix_00013667	chr11	-	3631	6	FSM	ENSG00000078902.16	ENST00000317204.11	3627	6	0	-4	0	4	multi-exon	FALSE	canonical	3	324	junction_5	16.7690190530037	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTCCCGAGTATTTTT	-8	True	NA	0	True	AATAAA	-25	NA	1309632	1274366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_1277254_1286001_1286093_1288623_1288777_1290226_1290410_1295644_1295795_1309465
H1_mix_00013668	chr11	-	3181	2	FSM	ENSG00000182208.15	ENST00000531976.1	3174	2	0	-7	0	7	multi-exon	FALSE	canonical	3	99	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACGTCTCAGCGTCTCGG	9392	False	NA	-3	True	AATAAA	-26	NA	1473436	1469449	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_1470489_1471294
H1_mix_00013669	chr11	-	1412	4	NNC	ENSG00000182208.15	novel	1745	5	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	46.5044800709208	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTACGTCTCAGCGTCT	5885	False	NA	-6	True	AATAAA	-23	NA	1480885	1469452	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_1470485_1471294_1471420_1480392_1480487_1480724
H1_mix_00013670	chr11	-	1649	3	ISM	ENSG00000182208.15	ENST00000329957.7	1745	5	5899	-4	5	4	intron_retention	FALSE	canonical	3	99	junction_1	8.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTACGTCTCAGCGTCT	5890	False	NA	-6	True	AATAAA	-23	NA	1480880	1469452	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_1470489_1471294_1471420_1480392
H1_mix_00013671	chr11	-	707	4	ISM	ENSG00000182208.15	ENST00000329957.7	1745	5	5884	715	-10	73	3prime_fragment	FALSE	canonical	3	78	junction_3	15.542057635833	3362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCCCGGGCCGGACAGGG	5875	False	NA	NA	False	NA	NA	NA	1480895	1470171	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_1470489_1471294_1471420_1480392_1480487_1480724
H1_mix_00013672	chr11	-	4831	7	FSM	ENSG00000184545.11	ENST00000397374.8	4824	7	0	-7	0	7	multi-exon	FALSE	canonical	3	16	junction_6	6.35085296108588	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCGCCTCTTCCTTCAG	8	True	NA	-1	True	AATAAA	-27	NA	1572271	1554043	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_1557575_1557793_1557918_1558111_1558272_1558888_1559056_1563850_1563990_1565595_1565935_1571900
H1_mix_00013673	chr11	-	2251	10	FSM	ENSG00000250644.3	ENST00000636615.1	2228	10	0	-23	0	23	multi-exon	FALSE	canonical	2	3	junction_1	496.892218235716	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCCTTCTACTTTGTGTC	34	False	NA	2	True	AATGAA	-20	NA	1763954	1734797	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_1735430_1747666_1748120_1753802_1753902_1753993_1754139_1754905_1755029_1757323_1757557_1758968_1759088_1759515_1759640_1761308_1761469_1763791
H1_mix_00013674	chr11	-	2055	9	FSM	ENSG00000117984.15	ENST00000236671.7	2055	9	0	0	0	0	multi-exon	FALSE	canonical	3	1130	junction_6	40.8587505927433	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGGTGTGCTCTTGTG	-6	True	NA	-5	True	AATACA	-25	NA	1763927	1752754	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_1753671_1753802_1753902_1753993_1754139_1754905_1755029_1757323_1757557_1758968_1759088_1759515_1759640_1761308_1761469_1763791
H1_mix_00013675	chr11	-	4408	8	FSM	ENSG00000117984.15	ENST00000637381.2	4408	8	0	0	0	0	multi-exon	FALSE	canonical	3	1130	junction_6	43.2713318868891	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCTCTGTGCTGGTGTGC	24	False	NA	-12	True	AATACA	-18	NA	1763964	1752761	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_1753671_1753802_1753902_1753993_1754139_1754905_1755029_1757323_1757557_1758968_1759088_1759515_1759640_1761308
H1_mix_00013676	chr11	-	2102	9	FSM	ENSG00000117984.15	ENST00000636571.1	1790	9	-75	-237	-38	0	multi-exon	FALSE	canonical	1	37	junction_7	390.835323378018	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCTCTGTGCTGGTGTGC	NA	False	NA	-12	True	AATACA	-18	NA	1764002	1752761	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_1753671_1753802_1753902_1753993_1754139_1754905_1755029_1757323_1757557_1758968_1759088_1759515_1759640_1761329_1761469_1763791
H1_mix_00013677	chr11	-	2056	5	FSM	ENSG00000130600.20	ENST00000414790.7	2353	5	292	5	-123	0	multi-exon	FALSE	canonical	1	2	junction_4	4.58257569495584	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTCGAGGACTCTGGA	4126	False	NA	NA	False	AATAAA	-15	NA	1997583	1995175	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_1995795_1995875_1995999_1996078_1996192_1996286_1996422_1996517
H1_mix_00013678	chr11	-	1398	2	FSM	ENSG00000183734.5	ENST00000331289.5	1485	2	87	0	87	0	multi-exon	FALSE	canonical	3	4	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGGCTCCTATCACCTA	517	False	NA	-6	True	AATAAA	-14	NA	2270501	2268497	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_2269127_2269732
H1_mix_00013679	chr11	-	647	2	NNC	ENSG00000236264.5	novel	1178	2	NA	NA	0	42092	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGGATATCAAAGGGAGAA	32	False	NA	NA	False	NA	NA	NA	2335749	2293042	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_2293075_2335134
H1_mix_00013681	chr11	-	844	1	FSM	ENSG00000269821.1	ENST00000597346.1	91667	1	88367	2456	88367	-2456	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGTAGTGGGGTAACAG	NA	False	NA	NA	False	NA	NA	NA	2611627	2610783	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_2610800_2611600
H1_mix_00013682	chr11	-	1934	3	FSM	ENSG00000129757.15	ENST00000430149.3	1930	3	0	-4	0	-1	multi-exon	FALSE	canonical	3	148	junction_2	35	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTGTTTGTGCTTGTGCC	9	True	NA	0	True	AATAAA	-25	NA	2885765	2883213	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_2883916_2883998_2884135_2884669
H1_mix_00013683	chr11	-	1777	4	FSM	ENSG00000129757.15	ENST00000440480.8	1773	4	0	-4	0	-1	multi-exon	FALSE	canonical	3	148	junction_2	29.4392028877595	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTGTTTGTGCTTGTGCC	-1	True	NA	0	True	AATAAA	-25	NA	2885775	2883213	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_2883916_2883998_2884135_2884669_2885467_2885633
H1_mix_00013684	chr11	-	1215	4	FSM	ENSG00000129757.15	ENST00000380725.2	1193	4	0	-22	0	0	multi-exon	FALSE	canonical	3	34	junction_2	82.4297680857266	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCAGTCTGTTTGTGCTTG	25	False	NA	-4	True	AATAAA	-21	NA	2885749	2883217	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_2883916_2883998_2884135_2885201_2885467_2885633
H1_mix_00013685	chr11	-	1702	4	NIC	ENSG00000129757.15	novel	1773	4	NA	NA	0	-18	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	76.3195038418533	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCGCCGGGTTCTAAATAAA	25	False	NA	-44	True	NA	NA	NA	2885749	2883257	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_2883911_2883998_2884135_2884669_2885467_2885633
H1_mix_00013687	chr11	-	2093	2	FSM	ENSG00000129757.15	ENST00000471157.2	944	2	-1106	-43	-32	0	multi-exon	FALSE	canonical	3	218	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAAAAGGAA	NA	False	NA	-64	True	TATAAA	-39	NA	2885807	2883631	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_2883916_2883998
H1_mix_00013688	chr11	-	820	2	FSM	ENSG00000181649.8	ENST00000314222.5	920	2	-14	114	-14	-114	multi-exon	FALSE	canonical	3	70	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGGTGGAGGCCCAGGAA	4055	False	NA	27	True	NA	NA	NA	2929434	2928386	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_2928668_2928895
H1_mix_00013689	chr11	-	2822	16	NIC	ENSG00000205531.13	novel	2463	16	NA	NA	37	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	533.357349459274	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCCATGTGGGTCTTTG	161	False	NA	-1	True	ATTAAA	-23	NA	2992221	2944429	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_2945647_2949226_2949265_2951258_2951316_2951779_2951810_2954526_2954647_2955743_2955767_2958398_2958545_2959769_2959910_2964679_2964752_2969802_2969935_2971447_2971535_2972101_2972244_2976023_2976124_2978283_2978343_2979206_2979238_2991793
H1_mix_00013690	chr11	-	2470	16	FSM	ENSG00000205531.13	ENST00000380542.9	2463	16	0	-7	0	1	multi-exon	FALSE	canonical	0	0	junction_6	479.423987718596	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCCATGTGGGTCTTTG	-25	True	NA	-1	True	ATTAAA	-23	NA	2992329	2944429	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_2945647_2949226_2949265_2951258_2951316_2951779_2951810_2954526_2954647_2955743_2955767_2958398_2958545_2959769_2959910_2964679_2964752_2969802_2969935_2971447_2971535_2972101_2972244_2976023_2976124_2978283_2978343_2979206_2979238_2992253
H1_mix_00013691	chr11	-	2516	15	FSM	ENSG00000205531.13	ENST00000620138.4	2479	15	-36	-1	-36	1	multi-exon	FALSE	canonical	0	0	junction_5	379.518444874554	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCCATGTGGGTCTTTG	NA	False	NA	-1	True	ATTAAA	-23	NA	2992413	2944429	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_2945647_2951258_2951316_2951779_2951810_2954526_2954647_2955743_2955767_2958398_2958545_2959769_2959910_2964679_2964752_2969802_2969935_2971447_2971535_2972101_2972244_2976023_2976124_2978283_2978343_2979206_2979238_2992253
H1_mix_00013693	chr11	-	3744	5	FSM	ENSG00000205531.13	ENST00000492594.6	570	5	-2273	-901	871	1	multi-exon	FALSE	canonical	3	961	junction_1	172.033971935778	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCCATGTGGGTCTTTG	NA	False	NA	-1	True	ATTAAA	-23	NA	2958063	2944429	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_2945647_2951258_2951316_2951779_2951810_2954526_2954647_2955743
H1_mix_00013699	chr11	-	1153	4	FSM	ENSG00000110619.18	ENST00000484484.5	1151	4	0	-2	0	2	multi-exon	FALSE	canonical	3	417	junction_1	81.5693297481079	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTCTGTCTTGTTCTGC	-1	True	NA	-7	True	AATAAA	-19	NA	3007010	3000926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3001249_3001969_3002601_3005365_3005434_3006878
H1_mix_00013700	chr11	-	2491	22	FSM	ENSG00000110619.18	ENST00000278224.13	2491	22	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_1	99.63709660768	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCTCTCTGTCTTGTTCT	-9	True	NA	-9	True	AATAAA	-17	NA	3057418	3000928	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3001249_3001961_3002054_3002540_3002601_3005365_3005434_3006878_3006960_3012194_3012277_3015780_3015850_3017105_3017296_3017856_3017955_3018407_3018512_3018619_3018750_3019138_3019268_3020219_3020333_3026675_3026798_3028995_3029085_3029302_3029444_3038049_3038200_3039193_3039293_3039834_3039932_3040895_3040985_3042164_3042257_3057342
H1_mix_00013701	chr11	-	2737	23	FSM	ENSG00000110619.18	ENST00000380525.9	2737	23	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_21	157.761248633015	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCTCTCTGTCTTGTTCT	-14	True	NA	-9	True	AATAAA	-17	NA	3057423	3000928	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3001249_3001969_3002054_3002540_3002601_3005365_3005434_3006878_3006960_3012194_3012277_3015780_3015850_3017105_3017296_3017856_3017955_3018407_3018512_3018619_3018750_3019138_3019268_3020219_3020333_3026675_3026798_3028995_3029085_3029302_3029444_3038049_3038200_3039193_3039293_3039834_3039932_3040895_3040985_3042164_3042257_3047752_3048002_3057342
H1_mix_00013702	chr11	-	2678	22	FSM	ENSG00000110619.18	ENST00000397111.9	2685	22	0	7	0	0	multi-exon	FALSE	canonical	3	417	junction_1	60.589881885081	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCTCTCTGTCTTGTTCT	14	True	NA	-9	True	AATAAA	-17	NA	3057613	3000928	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3001249_3001969_3002054_3002540_3002601_3005365_3005434_3006878_3006960_3012194_3012277_3015780_3015850_3017105_3017296_3017856_3017955_3018407_3018512_3018619_3018750_3019138_3019268_3020219_3020333_3026675_3026798_3028995_3029085_3029302_3029444_3038049_3038200_3039193_3039293_3039834_3039932_3040895_3040985_3042164_3042257_3057342
H1_mix_00013703	chr11	-	658	4	FSM	ENSG00000110619.18	ENST00000465240.1	658	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	271.180546663821	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTCGACCTCCGGTTCCC	NA	False	NA	NA	False	GGGGCT	-22	NA	3029057	3019189	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3019268_3020219_3020333_3026675_3026798_3028712
H1_mix_00013705	chr11	-	3839	22	FSM	ENSG00000021762.20	ENST00000263650.12	3854	22	0	15	0	-1	multi-exon	TRUE	canonical	3	14	junction_9	6.48179029606612	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTCTTGCGGGACTTCT	-21	True	NA	-14	True	AATAAA	-16	NA	3165310	3087121	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3088344_3089845_3089949_3090557_3090697_3092431_3092559_3092866_3093053_3093526_3093664_3093745_3093836_3094236_3094335_3100157_3100257_3101602_3101700_3102182_3102282_3103238_3103321_3104192_3104378_3107262_3107456_3107770_3107946_3119546_3119632_3120420_3120625_3121996_3122099_3122347_3122429_3126472_3126556_3129012_3129170_3165215
H1_mix_00013706	chr11	-	2970	4	FSM	ENSG00000005801.18	ENST00000354599.10	2970	4	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_3	52.1621403787161	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGTCTCTTCATCCTT	6	True	NA	-2	True	AATAAA	-15	NA	3379145	3357926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3360566_3370974_3371071_3371576_3371704_3379037
H1_mix_00013707	chr11	-	3187	6	FSM	ENSG00000005801.18	ENST00000399602.9	3187	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	187.67056242256	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGTCTCTTCATCCTT	5	True	NA	-2	True	AATAAA	-15	NA	3379146	3357926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3360566_3360719_3360789_3361742_3361890_3370974_3371071_3371576_3371704_3379037
H1_mix_00013708	chr11	-	3137	5	FSM	ENSG00000005801.18	ENST00000343338.11	3145	5	9	-1	5	0	multi-exon	FALSE	canonical	2	8	junction_4	183.572192883345	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGTCTCTTCATCCTT	4	True	NA	-2	True	AATAAA	-15	NA	3379213	3357926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3360566_3370974_3371071_3371576_3371704_3373576_3373676_3379037
H1_mix_00013709	chr11	-	3335	7	FSM	ENSG00000005801.18	ENST00000620374.4	3342	7	8	-1	4	0	multi-exon	FALSE	canonical	3	11	junction_2	154.276807503051	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGTCTCTTCATCCTT	3	True	NA	-2	True	AATAAA	-15	NA	3379214	3357926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3360566_3360719_3360789_3361742_3361890_3370974_3371071_3371576_3371704_3373576_3373657_3379037
H1_mix_00013710	chr11	-	9943	5	FSM	ENSG00000005801.18	ENST00000649622.1	9943	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	187.894917440574	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCACCCTCGACTAAGCT	-30	True	NA	NA	False	AAAACA	-23	NA	3379181	3358102	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3360566_3361742_3368856_3370974_3371071_3371576_3371704_3379037
H1_mix_00013711	chr11	-	2385	6	FSM	ENSG00000005801.18	ENST00000429541.6	2389	6	4	0	4	0	multi-exon	FALSE	canonical	3	26	junction_4	176.777374117843	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAATTATACTAGATGGAA	3	True	NA	59	True	AATATA	-43	NA	3379214	3358944	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3360566_3370974_3371071_3371576_3371704_3373576_3373657_3377616_3377901_3379037
H1_mix_00013712	chr11	-	1958	5	NIC	ENSG00000005801.18	novel	2389	6	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	120	junction_4	150.647767988776	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATAAGTCTCCAGAGCA	31	True	NA	10	True	AATAAA	-40	NA	3379120	3358993	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_3360566_3370974_3371071_3371576_3371704_3373576_3373657_3379037
H1_mix_00013713	chr11	-	2008	6	FSM	ENSG00000005801.18	ENST00000526601.5	2008	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	149.541164901174	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAACAAATATAA	5	True	NA	-34	True	NA	NA	NA	3379146	3359116	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3360566_3361742_3361890_3370974_3371071_3371576_3371704_3373576_3373657_3379037
H1_mix_00013720	chr11	-	3353	1	FSM	ENSG00000189398.5	ENST00000344740.4	973	1	-344	-2036	-344	2036	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCCTGTGATATTAGGAG	5030	False	NA	NA	False	NA	NA	NA	3392096	3388743	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3388700_3392100
H1_mix_00013721	chr11	-	3196	1	Genic_Genomic	ENSG00000166492.9	novel	NA	NA	NA	NA	10611	1662	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCACCTGCAAAAAAATAAAG	NA	False	NA	NA	False	NA	NA	NA	3411885	3408689	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr11_-_3408700_3411900
H1_mix_00013722	chr11	-	1241	4	FSM	ENSG00000167311.14	ENST00000397068.8	1232	4	0	-9	0	9	multi-exon	FALSE	canonical	3	43	junction_1	5.18544972870135	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGATTGGTTTATTCC	-3	True	NA	-4	True	ATTAAA	-27	NA	3641992	3638502	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3638794_3639002_3639036_3639641_3640372_3641805
H1_mix_00013723	chr11	-	1016	4	NIC	ENSG00000167311.14	novel	1154	4	NA	NA	14	2	combination_of_known_junctions	FALSE	canonical	2	5	junction_2	20.9920619917784	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGAATTTTATGATTGGT	401	False	NA	-11	True	ATTAAA	-20	NA	3641978	3638509	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_3638794_3639002_3639036_3639845_3640372_3641805
H1_mix_00013724	chr11	-	6927	33	FSM	ENSG00000110713.17	ENST00000359171.8	7023	33	103	-7	103	7	multi-exon	FALSE	canonical	3	38	junction_23	62.923991536913	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTTTGTATTTTTGAGC	110	False	NA	6	True	AATAAA	-32	NA	3797689	3675003	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3676377_3676508_3676621_3679553_3679709_3683199_3683442_3685972_3686195_3691346_3691490_3693231_3693376_3695448_3695607_3699081_3699349_3700609_3700840_3702462_3702893_3705199_3705357_3706444_3706628_3712563_3712729_3713817_3713996_3719411_3719551_3720711_3720826_3723156_3723456_3725102_3725220_3731390_3731579_3735190_3735325_3744508_3744650_3753315_3753409_3760487_3760627_3762901_3763040_3768580_3768745_3771747_3771929_3773631_3773740_3775881_3776022_3778872_3779050_3779155_3779258_3782041_3782146_3797399
H1_mix_00013725	chr11	-	6735	33	FSM	ENSG00000110713.17	ENST00000324932.12	6726	33	0	-9	0	1	multi-exon	FALSE	canonical	3	194	junction_23	44.4957753437054	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTTCCCTTTGTATTT	-10	True	NA	0	True	AATAAA	-26	NA	3797554	3675009	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3676377_3676508_3676621_3679553_3679709_3683199_3683442_3685972_3686195_3691346_3691490_3693231_3693376_3695448_3695607_3699081_3699349_3700609_3700840_3702462_3702893_3705199_3705357_3706444_3706628_3712563_3712729_3713817_3713996_3719411_3719551_3720711_3720826_3723156_3723456_3725102_3725220_3731390_3731579_3735190_3735325_3744508_3744650_3753315_3753409_3760538_3760627_3762901_3763040_3768580_3768745_3771747_3771929_3773631_3773740_3775881_3776022_3778872_3779050_3779155_3779258_3782041_3782146_3797399
H1_mix_00013726	chr11	-	6573	32	NIC	ENSG00000110713.17	novel	6726	33	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	39	junction_21	66.7850232763833	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTATTGGCTTTCCCT	3	True	NA	-8	True	AATAAA	-18	NA	3797541	3675017	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_3676377_3676508_3676621_3679553_3679709_3683199_3683442_3685972_3686195_3691346_3691490_3693231_3693376_3695448_3695607_3699081_3699349_3700609_3700840_3702462_3702893_3705199_3705357_3706444_3706628_3712563_3712729_3713817_3713996_3719411_3719551_3720711_3720826_3723156_3723456_3725102_3725220_3731390_3731579_3735190_3735325_3753315_3753409_3760538_3760627_3762901_3763040_3768580_3768745_3771747_3771929_3773631_3773740_3775881_3776022_3778872_3779050_3779155_3779258_3782041_3782146_3797399
H1_mix_00013727	chr11	-	5628	32	FSM	ENSG00000110713.17	ENST00000355260.7	5628	32	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	68.1410668745147	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCTACCCTGGCCCTTT	341	False	NA	69	True	NA	NA	NA	3797458	3675798	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3676377_3676508_3676621_3679553_3679709_3683199_3683442_3691346_3691490_3693231_3693376_3695448_3695607_3699081_3699349_3700609_3700840_3702462_3702893_3705199_3705357_3706444_3706628_3712563_3712729_3713817_3713996_3719411_3719551_3720711_3720826_3723156_3723456_3725102_3725220_3731390_3731579_3735190_3735325_3744508_3744650_3753315_3753409_3760538_3760627_3762901_3763040_3768580_3768745_3771747_3771929_3773631_3773740_3775881_3776022_3778872_3779050_3779155_3779258_3782041_3782146_3797399
H1_mix_00013728	chr11	-	392	2	FSM	ENSG00000110713.17	ENST00000530345.1	436	2	0	44	0	-44	multi-exon	FALSE	canonical	3	334	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTTTTTATTTTATTA	2253	False	NA	NA	False	NA	NA	NA	3695565	3693100	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3693376_3695448
H1_mix_00013731	chr11	-	3909	20	FSM	ENSG00000110713.17	ENST00000397004.8	3923	20	0	14	0	-14	multi-exon	FALSE	canonical	3	194	junction_10	38.2375574968394	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCTGAGGGAAAGAGTCA	3	True	NA	NA	False	TATAAA	-8	NA	3797541	3711566	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3712729_3713817_3713996_3719411_3719551_3720711_3720826_3723156_3723456_3725102_3725220_3731390_3731579_3735190_3735325_3744508_3744650_3753315_3753409_3760538_3760627_3762901_3763040_3768580_3768745_3771747_3771929_3773631_3773740_3775881_3776022_3778872_3779050_3779155_3779258_3782041_3782146_3797399
H1_mix_00013732	chr11	-	3722	20	FSM	ENSG00000110713.17	ENST00000397007.8	3698	20	0	-24	0	24	multi-exon	FALSE	canonical	3	38	junction_10	67.0305259769188	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTGCGCGTACAGGGGA	-3	True	NA	15	True	ATTAAA	-42	NA	3797547	3711810	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3712729_3713817_3713996_3719411_3719551_3720711_3720826_3723156_3723456_3725102_3725220_3731390_3731579_3735190_3735325_3744508_3744650_3753315_3753409_3760487_3760627_3762901_3763040_3768580_3768745_3771747_3771929_3773631_3773740_3775881_3776022_3778872_3779050_3779155_3779258_3782041_3782146_3797399
H1_mix_00013734	chr11	-	1348	2	FSM	ENSG00000177105.10	ENST00000351018.5	1295	2	0	-53	0	53	multi-exon	FALSE	canonical	3	69	junction_1	0	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCAGAGACTGGGAGCCT	-3	True	NA	45	True	NA	NA	NA	3840959	3826924	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3828207_3840893
H1_mix_00013735	chr11	-	1953	7	FSM	ENSG00000132109.10	ENST00000254436.8	1935	7	0	-18	0	18	multi-exon	FALSE	canonical	3	74	junction_4	6.94422221866655	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTTGTTCCTTAATCCT	-16	True	NA	0	True	AATAAA	-41	NA	4393702	4384878	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_4385854_4386156_4386258_4386967_4386991_4388299_4388531_4389653_4389750_4390001_4390459_4393632
H1_mix_00013736	chr11	-	3306	7	FSM	ENSG00000167333.13	ENST00000300747.10	3324	7	18	0	-9	0	multi-exon	FALSE	canonical	3	46	junction_2	8.32165848854662	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCAGACTGCTTCTTGAG	-15	True	NA	-2	True	AATAAA	-19	NA	4608213	4598671	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_4600827_4601026_4601128_4601663_4601687_4602151_4602413_4603244_4603341_4605078_4605562_4608026
H1_mix_00013738	chr11	-	3592	3	NNC	ENSG00000182070.7	novel	6178	2	NA	NA	-11045	-2699	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_1	61.5	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAGAATCCATTTTTTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	5165802	5149522	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_5152691_5163485_5163665_5165557
H1_mix_00013739	chr11	-	2202	3	NNC	ENSG00000182070.7	novel	6178	2	NA	NA	-11041	-4104	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	87	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCAGAGTCATACAAGGA	NA	False	NA	NA	False	AATAAA	-20	NA	5165798	5150927	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_5152691_5163466_5163665_5165557
H1_mix_00013740	chr11	-	678	3	Intergenic	novelGene_221	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	89	junction_1	48.5	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCCTATCTCCCTTTGCT	NA	False	NA	-84	True	TATAAA	-8	NA	5165816	5160416	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_-_5160657_5163485_5163665_5165557
H1_mix_00013741	chr11	-	687	3	Intergenic	novelGene_219	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	83.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCTTTGCTGACTCTCT	NA	False	NA	-76	True	TATAAA	-16	NA	5165798	5160408	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_-_5160657_5163466_5163665_5165557
H1_mix_00013742	chr11	-	552	3	FSM	ENSG00000284931.1	ENST00000642908.1	588	3	12	24	12	-24	multi-exon	FALSE	canonical	1	1	junction_2	1	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTATTCTGCTGAGAGATC	9	False	NA	NA	False	AATACA	-9	NA	5254771	5248293	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_5248488_5254291_5254515_5254636
H1_mix_00013744	chr11	-	808	3	FSM	ENSG00000213931.7	ENST00000396895.3	623	3	-211	26	-211	-26	multi-exon	FALSE	canonical	3	7	junction_2	1.5	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACATTTTCTTCAGTAAT	NA	False	NA	-30	True	NA	NA	NA	5270156	5268370	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_5268598_5269453_5269677_5269798
H1_mix_00013748	chr11	-	2811	7	NIC	ENSG00000132256.20	novel	3364	8	NA	NA	0	0	intron_retention	FALSE	canonical	2	5	junction_2	33.0424810744526	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCATCTAATACTTTGGA	17	True	NA	-19	True	AATAAA	-9	NA	5685044	5663616	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_5665396_5665655_5665683_5667688_5667712_5678203_5678435_5679073_5679170_5679760_5680239_5684867
H1_mix_00013750	chr11	-	282	1	FSM	ENSG00000183313.4	ENST00000332249.4	1094	1	765	47	765	-47	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACATATTCTCATTGTTT	NA	False	NA	NA	False	NA	NA	NA	5986220	5985938	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_5985900_5986200
H1_mix_00013751	chr11	-	1492	1	FSM	ENSG00000267940.1	ENST00000600308.1	1353	1	-157	18	-157	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATATTTTACTGCATATA	1414	False	NA	NA	False	NA	NA	NA	6203410	6201918	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6201900_6203400
H1_mix_00013752	chr11	-	1320	3	FSM	ENSG00000051009.11	ENST00000529360.1	1309	3	0	-11	0	11	multi-exon	FALSE	canonical	3	142	junction_2	7.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTTTCCCATTTTTTT	NA	False	NA	-2	True	TATAAA	-25	NA	6215355	6211333	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6211868_6214410_6214574_6214732
H1_mix_00013753	chr11	-	3310	12	NNC	ENSG00000051009.11	novel	3364	12	NA	NA	18	11	at_least_one_novel_splicesite	TRUE	canonical	3	8	junction_11	61.4067861757131	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTTTCCCATTTTTTT	40	False	NA	-2	True	TATAAA	-25	NA	6234618	6211333	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_6211868_6214410_6214574_6214732_6214912_6217370_6218151_6218599_6218764_6218970_6219051_6222441_6222610_6222810_6222898_6223079_6223239_6223609_6224249_6224378_6224661_6234543
H1_mix_00013754	chr11	-	3375	12	FSM	ENSG00000051009.11	ENST00000449352.7	3364	12	0	-11	0	11	multi-exon	FALSE	canonical	3	83	junction_3	47.521026229284	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTTTCCCATTTTTTT	-1	True	NA	-2	True	TATAAA	-25	NA	6234636	6211333	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6211868_6214410_6214574_6214732_6214912_6217370_6218151_6218599_6218764_6218970_6219051_6222441_6222610_6222810_6222898_6223079_6223239_6223609_6224249_6224378_6224708_6234543
H1_mix_00013755	chr11	-	3473	12	FSM	ENSG00000051009.11	ENST00000265978.8	3481	12	19	-11	19	11	multi-exon	FALSE	canonical	3	38	junction_4	54.6482364954819	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTTTCCCATTTTTTT	NA	False	NA	-2	True	TATAAA	-25	NA	6234692	6211333	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6211868_6214410_6214574_6214732_6214912_6217370_6218151_6218557_6218764_6218970_6219051_6222441_6222610_6222810_6222898_6223079_6223239_6223609_6224249_6224378_6224708_6234543
H1_mix_00013757	chr11	-	1028	2	FSM	ENSG00000170955.10	ENST00000303927.4	1028	2	0	0	0	0	multi-exon	FALSE	canonical	3	748	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGACTCCGTGAGAAGGGA	11	True	NA	-31	True	AATAAA	-17	NA	6320501	6318945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6319565_6320092
H1_mix_00013758	chr11	-	605	2	FSM	ENSG00000170955.10	ENST00000524852.1	605	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGTCCCAAAATAAATCC	463	False	NA	-40	True	NA	NA	NA	6320155	6319129	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6319672_6320092
H1_mix_00013759	chr11	-	2636	14	FSM	ENSG00000166313.20	ENST00000299402.10	2636	14	0	0	0	0	multi-exon	TRUE	canonical	3	347	junction_4	19.9362890554329	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCCTTCTTATGCCTG	14	True	NA	-37	True	AATAAA	-16	NA	6419070	6395124	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6395702_6395785_6395963_6396099_6396216_6400988_6401073_6401344_6401430_6401573_6401689_6402081_6402210_6402575_6402726_6403144_6403209_6403318_6403405_6403487_6403545_6403646_6403823_6410626_6411362_6418984
H1_mix_00013760	chr11	-	381	3	FSM	ENSG00000110169.12	ENST00000529037.1	672	3	291	0	291	0	multi-exon	FALSE	canonical	3	9	junction_2	2.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGACGGAGCCTTGTGTA	9031	False	NA	NA	False	NA	NA	NA	6432028	6431394	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6431471_6431640_6431804_6431886
H1_mix_00013761	chr11	-	1654	2	FSM	ENSG00000110171.21	ENST00000533064.1	1654	2	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTGCTGGGTTCTTGT	NA	False	NA	-3	True	AATAAA	-15	NA	6450391	6448612	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6449181_6449305
H1_mix_00013762	chr11	-	2838	12	FSM	ENSG00000110171.21	ENST00000345851.8	2838	12	0	0	0	0	multi-exon	TRUE	canonical	3	58	junction_6	9.92534113742268	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTGCTGGGTTCTTGT	-20	True	NA	-3	True	AATAAA	-15	NA	6473941	6448612	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6449181_6449305_6449447_6450550_6450622_6450891_6451061_6451270_6451439_6456071_6456176_6456296_6457030_6457295_6457477_6457695_6457848_6458064_6458297_6465564_6465733_6473790
H1_mix_00013763	chr11	-	2543	8	FSM	ENSG00000132254.13	ENST00000254584.6	2543	8	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_7	48.7258050896304	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGACCTGAAGGGTGAG	14	True	NA	NA	False	NA	NA	NA	6481312	6475679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6477269_6477717_6477893_6478040_6478199_6478737_6478960_6479139_6479259_6479971_6480069_6480322_6480424_6481230
H1_mix_00013764	chr11	-	1763	8	FSM	ENSG00000132254.13	ENST00000396777.8	1763	8	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_7	38.9887477226391	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCAGCGAGGTCAATTTG	-5	True	NA	NA	False	AATAAA	-16	NA	6481331	6476518	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6477269_6477717_6477893_6478040_6478199_6478737_6478960_6479139_6479259_6479971_6480069_6480322_6480464_6481230
H1_mix_00013767	chr11	-	6791	7	FSM	ENSG00000132275.11	ENST00000254605.11	6559	7	0	-232	0	232	multi-exon	FALSE	canonical	3	74	junction_4	6.03922364399781	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAAGGTACCATTGGTG	-7	True	NA	NA	False	ATTAAA	-22	NA	6603616	6594839	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6600266_6600485_6600583_6600668_6600776_6600925_6601056_6601148_6601603_6601851_6602216_6603403
H1_mix_00013769	chr11	-	5321	5	FSM	ENSG00000166337.11	ENST00000299424.9	5312	5	0	-9	0	9	multi-exon	FALSE	canonical	3	1136	junction_4	79.1596488117526	189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATCACTACTGCTCTTCT	-16	True	NA	-6	True	AATAAA	-26	NA	6612216	6606284	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6611012_6611188_6611304_6611387_6611453_6611663_6611819_6611957
H1_mix_00013773	chr11	-	3804	11	FSM	ENSG00000166340.18	ENST00000646777.1	3787	11	0	-17	0	1	multi-exon	FALSE	canonical	0	0	junction_5	69.8673027960862	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACGCCTCTCATTCGTTG	-9	True	NA	-12	True	ATTAAA	-20	NA	6619429	6612766	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6614687_6614865_6614992_6615170_6615330_6615441_6615563_6616004_6616075_6616314_6616860_6616974_6617429_6617625_6617777_6618775_6618916_6619195_6619268_6619383
H1_mix_00013774	chr11	-	3620	12	FSM	ENSG00000166340.18	ENST00000644831.1	3620	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	66.7304928626033	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTAAATGTCTGCTACAC	-9	True	NA	-39	True	NA	NA	NA	6619429	6612793	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6614687_6614865_6614992_6615170_6615330_6615441_6615563_6616004_6616075_6616314_6616504_6616660_6616860_6616974_6617429_6617625_6617777_6618775_6618916_6619195_6619268_6619383
H1_mix_00013778	chr11	-	10735	21	FSM	ENSG00000166341.9	ENST00000299441.5	10713	21	-17	-5	-17	5	multi-exon	FALSE	canonical	3	20	junction_20	11.4274887880059	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCAGCTTTGTTCTATAG	-16	True	NA	-17	True	AATAAA	-18	NA	6655826	6621324	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6624391_6624729_6624869_6625197_6625482_6625596_6625728_6625919_6626075_6626168_6626381_6626551_6626666_6626788_6627668_6628620_6628831_6629451_6629578_6629671_6629912_6629998_6630864_6631052_6631211_6631310_6631408_6631615_6631810_6632030_6633057_6633411_6633649_6633788_6634021_6634117_6634307_6639816_6641734_6655562
H1_mix_00013779	chr11	-	2377	3	FSM	ENSG00000158042.9	ENST00000288937.7	2305	3	24	-96	0	96	multi-exon	FALSE	canonical	3	856	junction_1	15.5	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACGCCTGTAATCCCCAC	-2	True	NA	NA	False	NA	NA	NA	6683316	6680288	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6682403_6682746_6682816_6683122
H1_mix_00013780	chr11	-	4892	3	FSM	ENSG00000149050.10	ENST00000278314.5	4892	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	9	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGACTAGAGGAGTCTT	1	True	NA	NA	False	AATAAA	-22	NA	7020346	6997084	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_7001556_7002708_7002856_7020072
H1_mix_00013781	chr11	-	1662	9	FSM	ENSG00000166394.15	ENST00000533558.5	1658	9	0	-4	0	0	multi-exon	FALSE	canonical	3	32	junction_8	106.961952931872	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCATGAAGTGTGGCTCTG	36	True	NA	-3	True	AATAAA	-20	NA	7674208	7665099	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_7665547_7666450_7666551_7667727_7667814_7668477_7668562_7669204_7669335_7669624_7669732_7672450_7672524_7672747_7672892_7673717
H1_mix_00013782	chr11	-	1166	8	ISM	ENSG00000166394.15	ENST00000299498.11	1249	9	612	-2	2	-2	3prime_fragment	FALSE	canonical	3	300	junction_4	25.4878922836162	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCATGAAGTGTGGCTC	4357	False	NA	-5	True	AATAAA	-18	NA	7672888	7665101	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_7665547_7666450_7666551_7667727_7667814_7668477_7668562_7669204_7669335_7669624_7669732_7672450_7672524_7672747
H1_mix_00013783	chr11	-	1262	9	NIC	ENSG00000166394.15	novel	1658	9	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	87	junction_8	89.3220997290144	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCCCATGAAGTGTGGC	38	True	NA	-7	True	AATAAA	-16	NA	7674206	7665103	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_7665547_7666450_7666551_7667727_7667814_7668477_7668562_7669204_7669335_7669624_7669732_7672450_7672524_7672747_7672892_7674111
H1_mix_00013784	chr11	-	1187	9	NIC	ENSG00000166394.15	novel	1249	9	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	134	junction_8	74.4579369510061	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCATGAAGTGTGGCTC	1	True	NA	-5	True	AATAAA	-18	NA	7674243	7665101	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_7665547_7666450_7666551_7667727_7667814_7668477_7668562_7669204_7669335_7669624_7669732_7672450_7672524_7672747_7672892_7674225
H1_mix_00013785	chr11	-	1797	11	NNC	ENSG00000166394.15	novel	1658	9	NA	NA	-9065	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	147.270125959069	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCCATGAAGTGTGGCT	NA	False	NA	-6	True	AATAAA	-17	NA	7686287	7665102	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_7665547_7666450_7666551_7667727_7667814_7668477_7668562_7669204_7669335_7669624_7669732_7672450_7672524_7672747_7672892_7674111_7674494_7678848_7678934_7686125
H1_mix_00013787	chr11	-	427	1	FSM	ENSG00000276668.1	ENST00000611809.1	427	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	624	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAATAATAATGACAATACAA	6487	False	NA	NA	False	AATAAA	-20	NA	7699988	7699561	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_7699600_7700000
H1_mix_00013789	chr11	-	215	1	FSM	ENSG00000183303.3	ENST00000329434.3	969	1	792	-38	792	38	mono-exon	FALSE	NA	NA	NA	NA	NA	890	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATACAGATTTAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	7796150	7795935	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_7795900_7796200
H1_mix_00013791	chr11	-	4110	2	FSM	ENSG00000182261.5	ENST00000328600.3	4237	2	117	10	117	-10	multi-exon	FALSE	canonical	0	0	junction_1	0	130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTAATATATAAAATTTGA	1948	False	NA	NA	False	AATAAA	-9	NA	7963540	7957546	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_7961323_7963206
H1_mix_00013793	chr11	-	5201	2	FSM	ENSG00000166405.15	ENST00000335425.7	5223	2	22	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTATTCAAAAAGTCAATAA	-4	True	NA	7	True	AATAAA	-29	NA	8169021	8106092	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_8111138_8168865
H1_mix_00013794	chr11	-	2613	7	NIC	ENSG00000166405.15	novel	2929	6	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_4	12.2667119564381	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTCTGTGTTATTTCC	27	True	NA	NA	False	GATAAA	-1	NA	8168990	8108941	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_8110408_8110658_8111138_8126658_8126805_8137377_8137472_8138271_8138348_8139966_8140194_8168865
H1_mix_00013799	chr11	-	730	3	ISM	ENSG00000166405.15	ENST00000528463.5	1211	7	-17	29008	0	-619	5prime_fragment	FALSE	canonical	3	47	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTCCCCTGCCAAAAAAAAA	-8	True	NA	NA	False	NA	NA	NA	8169025	8139672	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_8140194_8153374_8153424_8168865
H1_mix_00013800	chr11	-	1039	4	FSM	ENSG00000166407.14	ENST00000428101.6	1038	4	0	-1	0	1	multi-exon	FALSE	canonical	2	4	junction_2	1.24721912892465	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGGTTACTCTGCGTTGT	386	False	NA	NA	False	ATTAAA	-16	NA	8268716	8224312	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_8224722_8226974_8227101_8230290_8230505_8268426
H1_mix_00013801	chr11	-	3103	12	FSM	ENSG00000130413.16	ENST00000447869.5	3103	12	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_8	10.2634712926576	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTAATTTTTATGTTAAC	47	False	NA	-7	True	AATAAA	-19	NA	8475824	8391870	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_8392711_8413494_8413693_8435493_8435580_8436026_8436140_8440677_8440754_8452821_8452907_8454743_8454833_8457340_8457480_8461804_8461910_8464708_8464823_8473162_8473277_8474680
H1_mix_00013802	chr11	-	2526	13	NIC	ENSG00000130413.16	novel	2796	16	NA	NA	3	4	combination_of_known_splicesites	FALSE	canonical	3	44	junction_12	15.7524248574272	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTATGTTAACAAGAGGT	-37	True	NA	0	True	AATAAA	-26	NA	8594256	8391863	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_8392711_8413494_8413693_8435493_8435580_8436026_8436140_8440677_8440754_8452821_8452907_8454743_8454833_8457340_8457480_8461804_8461910_8464708_8464823_8473162_8473277_8474680_8475067_8594082
H1_mix_00013803	chr11	-	4344	20	FSM	ENSG00000166444.19	ENST00000313726.11	4341	20	0	-3	0	2	multi-exon	FALSE	canonical	3	40	junction_19	31.8368416702195	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTGTTCCTTGGCTTTG	9	True	NA	-14	True	AATAAA	-29	NA	8810674	8693348	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_8694131_8695462_8695550_8696426_8696667_8697524_8697637_8698932_8698975_8699212_8699391_8702571_8702721_8707084_8707226_8707776_8707855_8710844_8710915_8711121_8711232_8712550_8712736_8713997_8714043_8714609_8714707_8715602_8715819_8717740_8717893_8726072_8726210_8729949_8731210_8750620_8750726_8810516
H1_mix_00013805	chr11	-	480	2	FSM	ENSG00000166444.19	ENST00000532738.1	480	2	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCAAAGGGTAAGTCTTGG	1250	False	NA	NA	False	AAGAAA	-6	NA	8697773	8696435	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_8696667_8697524
H1_mix_00013809	chr11	-	1843	5	FSM	ENSG00000175348.11	ENST00000534025.6	1844	5	1	0	0	0	multi-exon	FALSE	canonical	3	101	junction_4	22.4833271559171	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGACTACTGTTTTAT	-21	True	NA	79	True	TATAAA	-17	NA	8964441	8947201	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_8948476_8953202_8953338_8956189_8956299_8962091_8962184_8964208
H1_mix_00013810	chr11	-	1659	4	FSM	ENSG00000175348.11	ENST00000309134.9	1659	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	63.1682057859982	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGTGTATCTATCTATG	-21	True	NA	-13	True	AATAAA	-19	NA	8964441	8947293	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_8948476_8953202_8953338_8956189_8956299_8964208
H1_mix_00013811	chr11	-	3763	7	FSM	ENSG00000175352.11	ENST00000309166.8	3761	7	0	-2	0	2	multi-exon	FALSE	canonical	3	31	junction_6	6.49786289653931	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGTCTGACAAAGTCTT	0	True	NA	-2	True	AATAAA	-21	NA	9004001	8980573	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_8983561_8983874_8983970_8984071_8984125_8985710_8985851_8987547_8987631_8988117_8988283_9003761
H1_mix_00013812	chr11	-	551	3	FSM	ENSG00000175352.11	ENST00000531142.1	551	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	2	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGCATACACACCGGGT	NA	False	NA	NA	False	NA	NA	NA	8985756	8983517	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_8983970_8984071_8984125_8985710
H1_mix_00013814	chr11	-	6013	12	FSM	ENSG00000184014.9	ENST00000679926.1	5996	12	0	-17	0	1	multi-exon	TRUE	canonical	3	183	junction_4	56.6605084970166	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGGATCACTGATTTTT	742	False	NA	-7	True	AATAAA	-18	NA	9171499	9138823	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_9139855_9141939_9142109_9142721_9142846_9143402_9143486_9144096_9147152_9150080_9150210_9150679_9150765_9152357_9152443_9160712_9160866_9165835_9165968_9169855_9169950_9170626
H1_mix_00013815	chr11	-	6112	15	FSM	ENSG00000184014.9	ENST00000679458.1	6097	15	0	-15	0	1	multi-exon	FALSE	canonical	3	183	junction_4	55.7153846045475	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGGATCACTGATTTTT	NA	False	NA	-7	True	AATAAA	-18	NA	9174084	9138823	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_9139855_9141939_9142109_9142721_9142846_9143402_9143486_9144096_9144279_9144994_9145114_9145669_9145816_9147029_9147152_9150080_9150210_9150679_9150765_9152357_9152443_9160712_9160866_9165835_9165968_9169855_9169950_9170626
H1_mix_00013816	chr11	-	5216	20	FSM	ENSG00000184014.9	ENST00000679745.1	5199	20	0	-17	0	1	multi-exon	FALSE	canonical	3	183	junction_4	51.2916272400355	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGGATCACTGATTTTT	NA	False	NA	-7	True	AATAAA	-18	NA	9206752	9138823	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_9139855_9141939_9142109_9142721_9142846_9143402_9143486_9144096_9145114_9145669_9145816_9147029_9147152_9150080_9150210_9150679_9150765_9152357_9152443_9160712_9160866_9165835_9165968_9169855_9169950_9170626_9170778_9178131_9178367_9178857_9179074_9180766_9181085_9193493_9193682_9203659_9204318_9206672
H1_mix_00013817	chr11	-	4992	23	FSM	ENSG00000184014.9	ENST00000328194.8	4991	23	0	-1	0	1	multi-exon	FALSE	canonical	3	183	junction_4	49.9844603951242	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGGATCACTGATTTTT	-13	True	NA	-7	True	AATAAA	-18	NA	9265350	9138823	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_9139855_9141939_9142109_9142721_9142846_9143402_9143486_9144096_9144279_9144994_9145114_9145669_9145816_9147029_9147152_9150080_9150210_9150679_9150765_9152357_9152443_9160712_9160866_9165835_9165968_9169855_9169950_9170626_9170778_9178131_9178367_9178857_9179074_9180766_9181085_9193493_9193682_9203659_9204318_9206672_9206783_9207560_9207633_9264960
H1_mix_00013818	chr11	-	4619	22	FSM	ENSG00000184014.9	ENST00000680742.1	4611	22	0	-8	0	0	multi-exon	FALSE	canonical	0	0	junction_1	88.2194234092848	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAATAAAACACCTGAAACA	296	False	NA	-32	True	ATTAAA	-43	NA	9265119	9138848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_9139855_9141973_9142109_9142721_9142846_9144096_9144279_9144994_9145114_9145669_9145816_9147029_9147152_9150080_9150210_9150679_9150765_9152357_9152443_9160712_9160866_9165835_9165968_9169855_9169950_9170626_9170778_9178131_9178367_9178857_9179074_9180766_9181085_9193493_9193682_9203659_9204318_9206672_9206783_9207560_9207633_9264960
H1_mix_00013819	chr11	-	4815	24	FSM	ENSG00000184014.9	ENST00000679568.1	4796	24	0	-19	0	0	multi-exon	FALSE	canonical	2	10	junction_1	84.8548410249446	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTGCATGGATCACTG	296	False	NA	-13	True	AATAAA	-12	NA	9265119	9138829	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_9139855_9140188_9140249_9141939_9142109_9142721_9142846_9143402_9143486_9144096_9144279_9144994_9145114_9145669_9145816_9147029_9147152_9150080_9150210_9150679_9150765_9152357_9152443_9160712_9160866_9165835_9165968_9169855_9169950_9170626_9170778_9178131_9178367_9178857_9179074_9180766_9181085_9193493_9193682_9203659_9204318_9206672_9206783_9207560_9207633_9264960
H1_mix_00013820	chr11	-	4548	21	FSM	ENSG00000184014.9	ENST00000680294.1	4527	21	0	-21	0	0	multi-exon	FALSE	canonical	3	8	junction_2	73.4577429547083	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTGCATGGATCACTG	296	False	NA	-13	True	AATAAA	-12	NA	9265119	9138829	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_9139855_9141939_9142109_9144096_9144279_9144994_9145114_9145669_9145816_9147029_9147152_9150080_9150210_9150679_9150765_9152357_9152443_9160712_9160866_9165835_9165968_9169855_9169950_9170626_9170778_9178131_9178367_9178857_9179074_9180766_9181085_9193493_9193682_9203659_9204318_9206672_9206783_9207560_9207633_9264960
H1_mix_00013821	chr11	-	2242	4	FSM	ENSG00000184014.9	ENST00000532696.2	2220	4	0	-22	0	22	multi-exon	FALSE	canonical	3	206	junction_3	18.263503375737	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGATAATGTCTGTTATGAT	423	False	NA	NA	False	ATTAAA	-14	NA	9264992	9202289	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_9204318_9206672_9206783_9207560_9207633_9264960
H1_mix_00013823	chr11	-	1443	8	FSM	ENSG00000166471.11	ENST00000299596.8	1443	8	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	98.0112446693371	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACATTTGGGATTTATT	940	False	NA	-5	True	AATAAA	-21	NA	9314567	9280653	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_9281042_9283370_9283594_9286454_9286594_9287701_9287807_9288441_9288536_9295258_9295388_9299583_9299702_9314320
H1_mix_00013826	chr11	-	726	3	FSM	ENSG00000166471.11	ENST00000533723.1	723	3	0	-3	0	3	multi-exon	FALSE	canonical	3	384	junction_1	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGCTGAACTAATTGTT	-24	True	NA	NA	False	ATTAAA	-43	NA	9314633	9295092	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_9295388_9299583_9299702_9314320
H1_mix_00013827	chr11	-	260	1	FSM	ENSG00000254884.1	ENST00000533804.1	406	1	236	-90	236	90	mono-exon	FALSE	NA	NA	NA	NA	NA	234	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTTGTGCTCCCCACAC	4054	False	NA	NA	False	NA	NA	NA	9311453	9311193	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_9311200_9311500
H1_mix_00013828	chr11	-	1191	1	FSM	ENSG00000268403.2	ENST00000596206.2	1147	1	13	-57	13	57	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCCCAGACTGCAATGCAG	NA	False	NA	51	True	NA	NA	NA	9460689	9459498	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_9459500_9460700
H1_mix_00013829	chr11	-	9342	40	FSM	ENSG00000133812.18	ENST00000256190.13	7450	40	0	-1892	0	0	multi-exon	TRUE	canonical	3	39	junction_26	30.4945431145199	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCTCATATACTTTTTT	-9	True	NA	1	True	AATAAA	-19	NA	10294219	9776775	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_9780517_9781506_9781639_9784350_9784439_9785124_9785319_9787633_9787739_9789108_9789343_9790555_9790684_9795830_9795958_9807999_9808186_9808900_9809003_9812531_9812709_9816839_9817025_9829355_9829497_9832223_9832421_9839497_9839697_9842624_9842771_9845564_9845741_9846955_9847084_9850022_9850219_9852675_9852750_9853539_9853713_9856457_9856721_9858225_9858397_9895942_9896012_9961956_9962107_9963772_9963883_9968340_9968546_9989496_9989596_9992414_9992544_9992989_9993104_9993920_9993999_9998265_9998380_10000913_10001023_10002556_10002690_10028451_10028558_10029764_10029876_10031047_10031171_10042843_10042982_10193901_10193988_10294014
H1_mix_00013831	chr11	-	555	4	FSM	ENSG00000133812.18	ENST00000528478.1	555	4	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_3	1.24721912892465	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAAAGTTCTTGGCTTTCC	5023	False	NA	NA	False	NA	NA	NA	9812754	9795913	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_9795958_9807999_9808186_9808900_9809003_9812531
H1_mix_00013835	chr11	-	5229	13	ISM	ENSG00000072952.20	ENST00000424001.5	5815	19	25602	1	7401	-1	3prime_fragment	FALSE	canonical	2	6	junction_5	4.17249592237335	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCAGCAGCCAAATGCCT	NA	False	NA	-8	True	AATAAA	-18	NA	10626583	10573091	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_10576576_10580454_10580590_10581866_10581987_10591547_10591613_10593491_10593600_10594145_10594196_10600917_10601060_10603119_10603252_10604404_10604546_10606741_10606773_10609727_10609852_10623777_10623857_10625965
H1_mix_00013837	chr11	-	6770	15	FSM	ENSG00000110321.19	ENST00000532383.5	6769	15	0	-1	0	0	multi-exon	FALSE	canonical	3	5923	junction_6	474.092694157019	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTGATGTGTGGCTGTAA	959	False	NA	-7	True	AATAAA	-17	NA	10808028	10797052	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_10797882_10798991_10799114_10799212_10799425_10799551_10800349_10800431_10800648_10800730_10800836_10800961_10801088_10801660_10802210_10802293_10802436_10803029_10803129_10803210_10803295_10803479_10804051_10804136_10804204_10804286_10805016_10805906
H1_mix_00013838	chr11	-	4019	23	NIC	ENSG00000110321.19	novel	3794	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	5	junction_22	1919.55724976463	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTGATGTGTGGCTGTA	12	True	NA	-8	True	AATAAA	-16	NA	10808919	10797053	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_10797882_10798991_10799114_10799212_10799425_10799551_10799757_10800089_10800349_10800431_10800648_10800730_10800836_10800961_10801088_10801660_10801775_10802048_10802210_10802293_10802436_10803029_10803129_10803210_10803295_10803479_10803591_10803898_10804051_10804136_10804204_10804286_10804419_10804912_10805016_10805906_10806048_10806819_10806886_10807254_10807382_10808276_10808509_10808704
H1_mix_00013839	chr11	-	3795	22	FSM	ENSG00000110321.19	ENST00000339995.11	3794	22	0	-1	0	0	multi-exon	FALSE	canonical	3	5830	junction_4	473.615404120694	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTGATGTGTGGCTGTAA	5	True	NA	-7	True	AATAAA	-17	NA	10808926	10797052	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_10797882_10798991_10799114_10799212_10799425_10799551_10799757_10800089_10800349_10800431_10800648_10800730_10800836_10800961_10801088_10801660_10801775_10802048_10802210_10802293_10802436_10803029_10803129_10803210_10803295_10803479_10803591_10803898_10804051_10804136_10804204_10804286_10804419_10804912_10805016_10805906_10806048_10806819_10806886_10807254_10807382_10808704
H1_mix_00013840	chr11	-	3346	21	FSM	ENSG00000110321.19	ENST00000396525.7	3346	21	0	0	0	0	multi-exon	FALSE	canonical	3	1001	junction_8	1296.88493707036	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAATTGGTCCCTCCTA	279	False	NA	-74	True	NA	NA	NA	10808708	10797169	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_10797882_10798991_10799114_10799212_10799425_10799551_10799757_10800089_10800349_10800431_10800648_10800730_10800836_10800961_10801088_10802048_10802210_10802293_10802436_10803029_10803129_10803210_10803295_10803479_10803591_10803898_10804051_10804136_10804204_10804286_10804419_10804912_10805016_10805906_10806048_10806819_10806886_10807254_10807382_10808704
H1_mix_00013846	chr11	-	584	5	FSM	ENSG00000110321.19	ENST00000525972.5	584	5	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_4	2963.84947112703	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGCGATTGGCAGAAGAT	8	True	NA	NA	False	NA	NA	NA	10808923	10804363	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_10804419_10804912_10805016_10805906_10806048_10806819_10806886_10808704
H1_mix_00013850	chr11	-	2700	3	FSM	ENSG00000236287.8	ENST00000413761.7	2687	3	0	-13	0	11	multi-exon	FALSE	canonical	3	120	junction_1	7	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTATTTCTTTACATTGT	6	True	NA	12	True	TTTAAA	-16	NA	10858053	10852692	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_10855087_10856143_10856258_10857861
H1_mix_00013851	chr11	-	2752	3	FSM	ENSG00000236287.8	ENST00000432999.6	2741	3	0	-11	0	11	multi-exon	FALSE	canonical	3	29	junction_1	52.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTATTTCTTTACATTGT	-14	False	NA	12	True	TTTAAA	-16	NA	10858073	10852692	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_10855119_10856143_10856258_10857861
H1_mix_00013854	chr11	-	1503	1	FSM	ENSG00000254598.3	ENST00000528848.3	1309	1	-19	-175	-19	175	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAAATTGCTCCCCA	26	False	NA	14	True	CATAAA	-29	NA	11353269	11351766	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_11351800_11353300
H1_mix_00013855	chr11	-	9549	8	FSM	ENSG00000050165.19	ENST00000396505.7	9549	8	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_7	51.5985286928349	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCCCCAGGGAAAATGCTA	757	False	NA	NA	False	ATTAAA	-8	NA	12009082	11956206	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_11964687_11965808_11965966_11966953_11967099_11968394_11968488_11998695_11998780_12002299_12002438_12008369_12008609_12008869
H1_mix_00013856	chr11	-	2525	7	FSM	ENSG00000050165.19	ENST00000683431.1	2525	7	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_2	14.3265487818944	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAATAGAAACAACCTGT	-16	True	NA	63	True	AATAAA	-26	NA	12008626	11963035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_11964687_11965808_11965966_11966953_11967099_11968394_11968488_11998695_11998780_12002299_12002438_12008369
H1_mix_00013857	chr11	-	2636	8	FSM	ENSG00000050165.19	ENST00000326932.8	2636	8	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_7	38.2414456220644	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTAGTTCTTGGATTT	469	False	NA	-7	True	TATAAA	-45	NA	12009370	11963105	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_11964687_11965808_11965966_11966953_11967099_11968394_11968488_11998695_11998780_12002299_12002438_12008369_12008609_12009171
H1_mix_00013859	chr11	-	630	3	FSM	ENSG00000050165.19	ENST00000534479.5	1087	3	0	457	0	-302	multi-exon	FALSE	canonical	3	90	junction_2	66.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCCCAAACTACAATTGAG	-6	True	NA	NA	False	NA	NA	NA	12009330	12002205	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_12002438_12008369_12008609_12009171
H1_mix_00013860	chr11	-	2451	9	FSM	ENSG00000148925.11	ENST00000278174.10	2439	9	0	-12	0	12	multi-exon	FALSE	canonical	3	67	junction_8	54.4149278691059	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACCAGATTTTTAGTCTC	12	True	NA	-6	True	AATAAA	-42	NA	13463222	13387995	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_13389142_13403167_13403279_13405658_13405857_13413529_13413651_13417157_13417261_13419459_13419746_13421641_13421839_13445023_13445182_13463091
H1_mix_00013861	chr11	-	1662	8	FSM	ENSG00000148925.11	ENST00000528120.5	1662	8	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_7	22.0611395342811	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTTTTTTAAAGACCAAAG	-63	True	NA	NA	False	NA	NA	NA	13463297	13388701	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_13389142_13403167_13403279_13405658_13405857_13413529_13413651_13417157_13417261_13419459_13419746_13421641_13421839_13463091
H1_mix_00013862	chr11	-	2343	6	FSM	ENSG00000133818.14	ENST00000256196.9	2343	6	0	0	0	0	multi-exon	FALSE	canonical	3	832	junction_5	142.34240408255	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGATGTTTGATTACTCAT	-28	True	NA	-16	True	ATTAAA	-19	NA	14359183	14277921	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_14279425_14281601_14281721_14294470_14294580_14294759_14294863_14295767_14295856_14358762
H1_mix_00013863	chr11	-	970	6	FSM	ENSG00000133818.14	ENST00000526063.5	970	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	456.0379808744	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTATATACACAGACATGC	-1	True	NA	NA	False	AATATA	-2	NA	14358485	14279102	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_14279425_14281601_14281721_14294470_14294580_14294759_14294863_14295767_14295856_14358256
H1_mix_00013864	chr11	-	704	5	ISM	ENSG00000133818.14	ENST00000531807.5	732	6	0	2205	0	0	5prime_fragment	FALSE	canonical	3	255	junction_4	406.911845489905	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGCAAAACACATTCTAG	NA	False	NA	NA	False	NA	NA	NA	14342094	14281601	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_14281721_14294470_14294580_14294759_14294863_14295767_14295856_14341809
H1_mix_00013865	chr11	-	3348	22	FSM	ENSG00000129083.13	ENST00000439561.7	3336	22	0	-12	0	6	multi-exon	FALSE	canonical	3	306	junction_21	68.5896139906932	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTTCTTTTAGTTGGGT	0	True	NA	-3	True	AATAAA	-29	NA	14499811	14457499	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_14457884_14458531_14458688_14460207_14460298_14461185_14461332_14464910_14465031_14466281_14466427_14468680_14468861_14469335_14469564_14474494_14474616_14475784_14475946_14476918_14477016_14479568_14479715_14480758_14480906_14480989_14481098_14483031_14483152_14486366_14486505_14488491_14488585_14490564_14490680_14493641_14493812_14494209_14494440_14498837_14498986_14499706
H1_mix_00013866	chr11	-	3487	22	FSM	ENSG00000129083.13	ENST00000249923.7	3481	22	0	-6	0	6	multi-exon	FALSE	canonical	3	44	junction_21	110.629860283716	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTTCTTTTAGTTGGGT	0	True	NA	-3	True	AATAAA	-29	NA	14499852	14457499	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_14457884_14458531_14458688_14460207_14460298_14461185_14461332_14464910_14465031_14466281_14466427_14468680_14468861_14469335_14469564_14474494_14474616_14475784_14475946_14476918_14477016_14479568_14479715_14480758_14480906_14480989_14481098_14483031_14483152_14486366_14486505_14488491_14488585_14490564_14490680_14493641_14493812_14494209_14494440_14498837_14498986_14499608
H1_mix_00013867	chr11	-	3329	22	NIC	ENSG00000129083.13	novel	3481	22	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	121	junction_21	96.8432588260296	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCAATGGATTTCTTTTAG	19	True	NA	-9	True	AATAAA	-23	NA	14499833	14457505	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_14457884_14458531_14458688_14460207_14460298_14461185_14461332_14464910_14465031_14466281_14466427_14468680_14468861_14469335_14469564_14474494_14474616_14475784_14475946_14476918_14477016_14479568_14479715_14480758_14480906_14480989_14481098_14483031_14483152_14486366_14486505_14488491_14488585_14490564_14490680_14493641_14493812_14494209_14494440_14498837_14498986_14499741
H1_mix_00013868	chr11	-	3513	22	NIC	ENSG00000129083.13	novel	3481	22	NA	NA	0	26	combination_of_known_junctions	FALSE	canonical	3	58	junction_21	108.068971006164	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAATTTCTATTATAAAT	0	True	NA	17	True	NA	NA	NA	14499852	14457479	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_14457884_14458531_14458688_14460207_14460298_14461185_14461332_14464910_14465031_14466281_14466427_14468680_14468861_14469335_14469564_14474494_14474616_14475784_14475946_14476918_14477016_14479568_14479715_14480758_14480906_14480989_14481098_14483031_14483152_14486366_14486505_14488491_14488585_14490564_14490680_14493641_14493812_14494209_14494440_14498837_14498986_14499602
H1_mix_00013870	chr11	-	1197	10	FSM	ENSG00000129084.18	ENST00000396394.7	1195	10	0	-2	0	0	multi-exon	FALSE	canonical	3	1328	junction_9	119.88420338903	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTTTTTGTTTTTTTAA	-18	True	NA	0	True	AATAAA	-22	NA	14520386	14504873	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_14505249_14507655_14507767_14510871_14510952_14513569_14513700_14513816_14513888_14514402_14514492_14517641_14517746_14517879_14517982_14518996_14519042_14520296
H1_mix_00013871	chr11	-	1527	10	FSM	ENSG00000129084.18	ENST00000530457.5	1527	10	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_9	455.314055228794	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGACAACTGTGAAATAAAAT	5	True	NA	-39	True	NA	NA	NA	14520363	14504912	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_14505249_14507655_14507767_14510871_14510952_14513569_14513700_14513816_14513888_14514402_14514492_14517641_14517746_14517879_14517982_14518996_14519042_14519904
H1_mix_00013872	chr11	-	1266	11	FSM	ENSG00000129084.18	ENST00000418988.2	1266	11	0	0	0	0	multi-exon	TRUE	canonical	2	13	junction_10	607.570086492085	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATGTGAGTTTTTTCCAA	1080	False	NA	24	True	NA	NA	NA	14643617	14505063	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_14505249_14507655_14507767_14510871_14510952_14513569_14513700_14513816_14513888_14514402_14514492_14517641_14517746_14517879_14517982_14518996_14519042_14610965_14611152_14643454
H1_mix_00013874	chr11	-	2214	5	FSM	ENSG00000186104.11	ENST00000334636.10	2214	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	22.599778759979	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGGCTATTGAATCTTT	-3	True	NA	NA	False	AATATA	-18	NA	14892231	14877439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_14878298_14879113_14879444_14880135_14880769_14885775_14885918_14891980
H1_mix_00013875	chr11	-	1882	5	FSM	ENSG00000186104.11	ENST00000530609.5	1882	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	14.9059551857638	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACACAGATGTGTCTTAA	588	False	NA	NA	False	AATAAA	-24	NA	14891640	14878008	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_14878298_14879113_14879444_14880135_14880769_14885775_14885918_14891152
H1_mix_00013876	chr11	-	1668	5	FSM	ENSG00000186104.11	ENST00000534686.5	1668	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	19.8667435680838	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACACAGATGTGTCTTAA	3	True	NA	NA	False	AATAAA	-24	NA	14891662	14878008	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_14878298_14879113_14879208_14880135_14880769_14885775_14885918_14891152
H1_mix_00013877	chr11	-	2216	4	NIC	ENSG00000186104.11	novel	1882	5	NA	NA	0	-6	intron_retention	FALSE	canonical	2	5	junction_3	25.9229627936314	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGCCAAATGAACACAGAT	588	False	NA	NA	False	AATAAA	-15	NA	14891640	14878017	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_14878298_14879113_14879208_14880135_14880769_14890431
H1_mix_00013879	chr11	-	1242	1	FSM	ENSG00000213785.3	ENST00000525311.1	588	1	53	-707	53	707	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGCTTTTGTGAACTTG	2517	False	NA	NA	False	NA	NA	NA	16484618	16483376	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_16483400_16484600
H1_mix_00013880	chr11	-	2329	4	NNC	ENSG00000166689.16	novel	5530	27	NA	NA	3296	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	23.6971634495683	156	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTTTCCTGTTTCTTGCT	8749	False	NA	-26	True	ATTAAA	-13	NA	16786561	16777296	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_16779016_16782753_16782897_16783699_16783834_16786228
H1_mix_00013887	chr11	-	747	3	FSM	ENSG00000110700.7	ENST00000531908.5	746	3	0	-1	0	0	multi-exon	FALSE	canonical	3	11387	junction_1	2555	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTCATATTTATTTTC	1649	False	NA	-14	True	AATAAA	-20	NA	17076020	17074387	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_17074467_17075096_17075198_17075453
H1_mix_00013888	chr11	-	492	6	FSM	ENSG00000110700.7	ENST00000228140.6	491	6	0	-1	0	0	multi-exon	FALSE	canonical	3	66	junction_2	5976.52081398534	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTCATATTTATTTTC	3	True	NA	-14	True	AATAAA	-20	NA	17077666	17074387	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_17074467_17075096_17075164_17075453_17075624_17077167_17077247_17077428_17077478_17077618
H1_mix_00013889	chr11	-	554	6	FSM	ENSG00000110700.7	ENST00000525634.6	527	6	0	-27	0	27	multi-exon	FALSE	canonical	3	11387	junction_1	2038.8285263847	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATATATATCAGTG	2	True	NA	13	True	ACTAAA	-30	NA	17077667	17074360	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_17074467_17075096_17075198_17075453_17075624_17077167_17077247_17077428_17077478_17077618
H1_mix_00013890	chr11	-	669	5	FSM	ENSG00000110700.7	ENST00000525828.1	664	5	0	-5	0	0	multi-exon	FALSE	canonical	3	11387	junction_1	2145.8143413399	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTCATATTTATTTTC	1	True	NA	-14	True	AATAAA	-20	NA	17077668	17074387	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_17074467_17075096_17075198_17075453_17075624_17077167_17077247_17077428
H1_mix_00013891	chr11	-	562	6	FSM	ENSG00000110700.7	ENST00000526895.5	561	6	0	-1	0	0	multi-exon	FALSE	canonical	3	172	junction_5	6260.93088925281	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTCATATTTATTTTC	NA	False	NA	-14	True	AATAAA	-20	NA	17077706	17074387	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_17074467_17075096_17075198_17075453_17075624_17077167_17077247_17077428_17077474_17077618
H1_mix_00013893	chr11	-	568	3	FSM	ENSG00000110700.7	ENST00000534329.1	568	3	0	0	0	0	multi-exon	FALSE	canonical	3	13351	junction_2	1606.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGCTGCGTGTGACTTCG	NA	False	NA	NA	False	NA	NA	NA	17077715	17076824	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_17077247_17077428_17077478_17077618
H1_mix_00013895	chr11	-	8431	33	FSM	ENSG00000011405.14	ENST00000691414.1	8428	33	13	-16	10	13	multi-exon	FALSE	canonical	3	259	junction_22	43.0836645196007	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCCTTGTTGACATACT	-6	True	NA	-19	True	AATAAA	-18	NA	17207973	17086558	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_17089921_17091333_17091460_17091546_17091657_17091995_17092069_17092158_17092277_17094260_17094386_17097056_17097265_17099859_17099970_17101277_17101435_17102661_17102832_17105168_17105306_17110431_17110562_17112573_17112667_17114360_17114466_17117490_17117672_17118644_17118740_17119219_17119314_17119785_17119975_17122187_17122334_17122701_17122814_17129299_17129468_17131915_17132039_17134818_17135030_17135110_17135160_17136481_17136626_17145667_17145732_17145862_17145943_17147516_17147629_17148666_17148788_17150497_17150656_17155525_17155630_17168676_17169807_17207847
H1_mix_00013896	chr11	-	330	1	FSM	ENSG00000240808.1	ENST00000477436.1	290	1	1	-41	1	41	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATTAGAAGGCAGG	6629	False	NA	NA	False	AATAAA	-41	NA	17138264	17137934	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_17137900_17138300
H1_mix_00013897	chr11	-	3591	1	FSM	ENSG00000187486.7	ENST00000339994.5	3412	1	-181	2	32	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGAGACGGTGCTTTTAT	503	False	NA	-5	True	NA	NA	NA	17388840	17385249	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_17385200_17388800
H1_mix_00013898	chr11	-	2721	2	FSM	ENSG00000187486.7	ENST00000682350.1	2035	2	-54	-632	-54	-2	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGAGACGGTGCTTTTAT	379	False	NA	-5	True	NA	NA	NA	17388964	17385249	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_17387847_17388840
H1_mix_00013899	chr11	-	480	1	FSM	ENSG00000006611.17	ENST00000624811.1	1194	1	717	-3	717	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGGAGTGAGTGTGGATT	NA	False	NA	-1	True	AATAAA	-20	NA	17494376	17493896	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_17493900_17494400
H1_mix_00013900	chr11	-	1410	11	NIC	ENSG00000129158.11	novel	1451	11	NA	NA	0	8	combination_of_known_junctions	FALSE	canonical	3	59	junction_10	35.4639253326532	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGAATTGTTTTGTTGGGC	23	True	NA	0	True	AATAAA	-28	NA	18012898	17788039	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_17788414_17878207_17878245_17959469_17959637_17988596_17988756_17992930_17992994_17995795_17995910_18000496_18000558_18004440_18004536_18006590_18006747_18007940_18008077_18012850
H1_mix_00013902	chr11	-	1453	11	FSM	ENSG00000129158.11	ENST00000265965.10	1451	11	6	-8	-5	8	multi-exon	FALSE	canonical	3	59	junction_10	35.4639253326532	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGAATTGTTTTGTTGGGC	-13	True	NA	0	True	AATAAA	-28	NA	18013041	17788039	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_17788414_17878207_17878245_17959469_17959637_17988596_17988756_17992930_17992994_17995795_17995910_18000496_18000558_18004440_18004536_18006590_18006747_18007940_18008077_18012950
H1_mix_00013906	chr11	-	1570	13	NNC	ENSG00000166788.10	novel	1573	12	NA	NA	-17	37397	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	201.347957526268	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTCAACAAGTGTTAGTA	NA	False	NA	NA	False	NA	NA	NA	18106104	18032537	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_18032564_18080342_18080492_18081410_18081504_18083534_18083732_18086865_18087055_18087142_18087226_18089329_18089511_18090174_18090291_18090433_18090494_18092244_18092325_18096770_18096855_18103232_18103347_18105906
H1_mix_00013908	chr11	-	1568	12	FSM	ENSG00000166788.10	ENST00000524803.6	1573	12	0	5	0	-5	multi-exon	FALSE	canonical	0	0	junction_3	161.429666387819	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAATTGTCTGGTGTTAAC	-14	True	NA	-3	True	ACTAAA	-14	NA	18106082	18080296	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_18080492_18081410_18081504_18083534_18083732_18086865_18087055_18087142_18087226_18089329_18089511_18090174_18090291_18090433_18090494_18092244_18092325_18096770_18096855_18103232_18103347_18105906
H1_mix_00013909	chr11	-	1554	12	FSM	ENSG00000166788.10	ENST00000300013.8	1518	12	11	-47	0	-5	multi-exon	FALSE	canonical	0	0	junction_3	161.429666387819	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAATTGTCTGGTGTTAAC	-3	True	NA	-3	True	ACTAAA	-14	NA	18106071	18080296	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_18080492_18081410_18081504_18083534_18083729_18086865_18087055_18087142_18087226_18089329_18089511_18090174_18090291_18090433_18090494_18092244_18092325_18096770_18096855_18103232_18103347_18105906
H1_mix_00013910	chr11	-	950	8	FSM	ENSG00000166788.10	ENST00000531751.5	949	8	0	-1	0	0	multi-exon	FALSE	canonical	0	0	junction_2	188.572619043861	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGAAATTGACTTATTGG	NA	False	NA	-8	True	AATAAA	-20	NA	18092324	18080343	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_18080492_18081410_18081504_18086865_18087055_18087142_18087226_18089329_18089511_18090174_18090291_18090433_18090494_18092244
H1_mix_00013911	chr11	-	638	2	FSM	ENSG00000166788.10	ENST00000530237.1	471	2	-167	0	-167	0	multi-exon	FALSE	canonical	3	504	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAGTTGAAATTGACTTA	NA	False	NA	-12	True	AATAAA	-16	NA	18081904	18080347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_18080492_18081410
H1_mix_00013913	chr11	-	4996	22	FSM	ENSG00000110756.18	ENST00000396253.7	4725	22	-184	-87	-160	87	multi-exon	FALSE	canonical	3	35	junction_21	15.6001627993133	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGGTTAAAGAGATTGTC	94	False	NA	89	True	NA	NA	NA	18322358	18278580	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_18279943_18281949_18282221_18283794_18283902_18285345_18285460_18286590_18286711_18287534_18287691_18287892_18288014_18291441_18292020_18292898_18292977_18295019_18295170_18295998_18296123_18296797_18296985_18297558_18297718_18298791_18298971_18300827_18300917_18305421_18305494_18306134_18306348_18308945_18309080_18310740_18310934_18311386_18311452_18311913_18312025_18321945
H1_mix_00013914	chr11	-	4969	23	FSM	ENSG00000110756.18	ENST00000349215.8	4840	23	-34	-95	0	87	multi-exon	TRUE	canonical	3	25	junction_22	18.9808515950346	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGGTTAAAGAGATTGTC	278	False	NA	89	True	NA	NA	NA	18322174	18278580	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_18279943_18281949_18282221_18283794_18283902_18285345_18285460_18286590_18286711_18287534_18287691_18287892_18288014_18291441_18292020_18292898_18292977_18295019_18295170_18295998_18296123_18296797_18296985_18297558_18297718_18298791_18298971_18300827_18300917_18305421_18305494_18306134_18306348_18308945_18309080_18310740_18310934_18311386_18311452_18311913_18312025_18317750_18317908_18321945
H1_mix_00013916	chr11	-	1121	6	FSM	ENSG00000110756.18	ENST00000545561.1	1121	6	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_5	6.55438784326958	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCAATCCTAACTGGTTA	NA	False	NA	NA	False	NA	NA	NA	18291942	18283792	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_18283902_18285345_18285460_18286590_18286711_18287534_18287691_18287892_18288014_18291441
H1_mix_00013917	chr11	-	1551	10	FSM	ENSG00000074319.13	ENST00000251968.4	1534	10	0	-17	0	17	multi-exon	FALSE	canonical	3	644	junction_2	32.6330136556052	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTTTAGGAAAGATCCAT	-26	True	NA	2	True	AATAAA	-31	NA	18526942	18480293	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_18480636_18481629_18481870_18483869_18484073_18502485_18502578_18506856_18506924_18509541_18509666_18514677_18514842_18516098_18516165_18519518_18519604_18526774
H1_mix_00013918	chr11	-	4207	12	FSM	ENSG00000151116.17	ENST00000396197.8	4207	12	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	8.86258735051196	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGAGATGCTTCATTTAT	0	True	NA	-2	True	AATAAA	-16	NA	18588734	18529608	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_18532488_18534329_18534454_18536405_18536470_18544622_18544797_18546879_18547051_18558227_18558331_18564891_18565011_18566346_18566483_18570213_18570378_18575346_18575413_18578723_18578809_18588612
H1_mix_00013919	chr11	-	989	7	FSM	ENSG00000151116.17	ENST00000300038.7	995	7	0	6	0	-6	multi-exon	FALSE	canonical	2	4	junction_1	19.6079632349263	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAAGTTGCTTGTTTTCT	-2	True	NA	-9	True	AATAAA	-15	NA	18588681	18563651	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_18564002_18564891_18565011_18566346_18566483_18570213_18570378_18575346_18575413_18578723_18578809_18588612
H1_mix_00013920	chr11	-	5603	6	FSM	ENSG00000179119.15	ENST00000336349.6	5601	6	0	-2	0	2	multi-exon	FALSE	canonical	3	75	junction_5	8.11418511004032	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCTGGTTTGCATTTA	1	True	NA	-5	True	ATTAAA	-16	NA	18634342	18606400	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_18609955_18611476_18611555_18612313_18612489_18614562_18616099_18616874_18616990_18634197
H1_mix_00013922	chr11	-	3096	15	FSM	ENSG00000110786.18	ENST00000358540.7	3091	15	0	-5	0	5	multi-exon	FALSE	canonical	3	68	junction_14	17.9636821824207	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTGTGTGATTTGCCT	-13	True	NA	4	True	AATAAA	-29	NA	18791798	18727922	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_18729028_18729452_18729567_18729657_18729819_18732591_18732703_18733234_18733373_18733555_18733636_18737879_18737965_18740602_18740793_18742261_18742504_18742991_18743076_18743321_18743430_18744005_18744200_18765806_18765884_18771938_18772072_18791524
H1_mix_00013923	chr11	-	3131	14	FSM	ENSG00000110786.18	ENST00000396168.1	2796	14	-326	-9	-168	5	multi-exon	FALSE	canonical	3	24	junction_13	27.4674632695038	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTGTGTGATTTGCCT	618	False	NA	4	True	AATAAA	-29	NA	18791966	18727922	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_18729028_18729452_18729567_18729657_18729819_18732591_18732703_18733234_18733373_18733555_18733636_18737879_18737965_18740602_18740793_18742261_18742504_18742991_18743076_18743321_18743430_18744005_18744200_18765806_18765884_18791524
H1_mix_00013924	chr11	-	3819	15	FSM	ENSG00000110786.18	ENST00000396170.5	3871	15	59	-7	59	5	multi-exon	FALSE	canonical	3	5	junction_11	36.6068466886974	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTGTGTGATTTGCCT	NA	False	NA	4	True	AATAAA	-29	NA	18792662	18727922	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_18729028_18729452_18729567_18729657_18729819_18732591_18732703_18733234_18733373_18733555_18733636_18737879_18737965_18740602_18740793_18742261_18742504_18742991_18743076_18743321_18743334_18744005_18744200_18765806_18765884_18771938_18772027_18791524
H1_mix_00013925	chr11	-	3335	15	NIC	ENSG00000110786.18	novel	3091	15	NA	NA	-289	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_14	26.0544954795497	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGGGTCTGTGTGATT	497	False	NA	-1	True	AATAAA	-24	NA	18792087	18727927	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_18729028_18729452_18729567_18729657_18729819_18732591_18732703_18733234_18733373_18733555_18733636_18737879_18737965_18740602_18740793_18742261_18742504_18742991_18743076_18743321_18743430_18744005_18744200_18765806_18765884_18771938_18772027_18791524
H1_mix_00013926	chr11	-	3772	13	FSM	ENSG00000129173.13	ENST00000250024.9	3706	13	-66	0	-66	0	multi-exon	FALSE	canonical	3	30	junction_12	9.02273363356263	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGCATTTTCATTTCGCC	649	False	NA	NA	False	ATTAAA	-17	NA	19241011	19224062	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_19224841_19225220_19225616_19225731_19225865_19229453_19229989_19230240_19230329_19230630_19230835_19232233_19232372_19234359_19234522_19234743_19235059_19237313_19237471_19237853_19238133_19240106_19240231_19240547
H1_mix_00013927	chr11	-	3432	13	FSM	ENSG00000129173.13	ENST00000527884.5	3432	13	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_12	9.90335240657874	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGCATTTTCATTTCGCC	1	True	NA	NA	False	ATTAAA	-17	NA	19241620	19224062	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_19224841_19225220_19225616_19225731_19225865_19229453_19229989_19230240_19230329_19230630_19230835_19232233_19232372_19234359_19234522_19234743_19235059_19237313_19237471_19237853_19238133_19240106_19240231_19241496
H1_mix_00013929	chr11	-	1714	1	FSM	ENSG00000270607.1	ENST00000603468.1	1686	1	-145	117	-145	-117	mono-exon	FALSE	NA	NA	NA	NA	NA	1261	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCCTTTGCCATCTGAT	2668	False	NA	NA	False	NA	NA	NA	19712764	19711050	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_19711000_19712800
H1_mix_00013930	chr11	-	3574	1	FSM	ENSG00000183161.6	ENST00000327470.6	3291	1	-93	-190	-93	190	mono-exon	FALSE	NA	NA	NA	NA	NA	324	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCGTTATATCATCTTAAT	NA	False	NA	NA	False	AATATA	-2	NA	22625916	22622342	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_22622300_22625900
H1_mix_00013931	chr11	-	4478	4	FSM	ENSG00000198168.9	ENST00000354193.5	4479	4	0	1	0	-1	multi-exon	FALSE	canonical	3	243	junction_1	11.8415464455544	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACATTGTATGTTTTTG	0	True	NA	NA	False	AATAAA	-16	NA	22829801	22818927	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_22823134_22827206_22827321_22827823_22827875_22829694
H1_mix_00013933	chr11	-	695	3	NNC	ENSG00000254560.6	novel	879	5	NA	NA	0	166	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_1	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTAGTTATTACTAATTA	NA	False	NA	65	True	AATAAA	-23	NA	27220086	27216954	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_27217481_27219686_27219816_27220046
H1_mix_00013934	chr11	-	1012	2	FSM	ENSG00000254560.6	ENST00000531363.1	745	2	-70	-197	-59	166	multi-exon	FALSE	canonical	3	21	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTAGTTATTACTAATTA	NA	False	NA	65	True	AATAAA	-23	NA	27220172	27216954	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_27217481_27219686
H1_mix_00013935	chr11	-	1477	7	NNC	ENSG00000109881.17	novel	1452	6	NA	NA	0	44488	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	120.973481942669	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAACAGAACACAATAAAA	7	True	NA	NA	False	NA	NA	NA	27363215	27286338	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_27286365_27338512_27339036_27340695_27340838_27341391_27341551_27350331_27350440_27357402_27357542_27362835
H1_mix_00013937	chr11	-	1462	6	FSM	ENSG00000109881.17	ENST00000328697.11	1452	6	0	-10	0	10	multi-exon	FALSE	canonical	3	234	junction_3	46.2445672484888	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTACTAGTTTACATTTA	7	True	NA	-5	True	AATAAA	-30	NA	27363215	27338501	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_27339036_27340695_27340838_27341391_27341551_27350331_27350440_27357402_27357542_27362835
H1_mix_00013938	chr11	-	3554	3	FSM	ENSG00000109881.17	ENST00000317945.6	2109	3	19	-1464	0	1464	multi-exon	FALSE	canonical	3	307	junction_1	33.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTTTGTGGACACTTGT	7	True	NA	NA	False	AATAAA	-24	NA	27363215	27347404	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_27350440_27357402_27357542_27362835
H1_mix_00013939	chr11	-	5250	18	FSM	ENSG00000205213.14	ENST00000379214.9	5250	18	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_14	41.8371368614207	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATTTTGCCTTAATTTAA	1	True	NA	-18	True	ATTAAA	-16	NA	27472790	27365960	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_27369144_27371614_27371699_27372282_27372399_27373550_27373677_27373974_27374047_27376298_27376371_27377157_27377224_27378696_27378769_27380270_27380340_27380639_27380712_27380894_27380967_27382187_27382257_27384335_27384408_27385252_27385469_27391093_27391166_27392446_27392519_27412788_27412861_27472117
H1_mix_00013941	chr11	-	573	2	FSM	ENSG00000205213.14	ENST00000527773.1	420	2	-221	68	-221	-68	multi-exon	FALSE	canonical	3	504	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTATATTCATATTTTG	NA	False	NA	NA	False	NA	NA	NA	27385753	27384335	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_27384408_27385252
H1_mix_00013942	chr11	-	4842	5	FSM	ENSG00000148943.12	ENST00000278193.7	4842	5	0	0	0	0	multi-exon	FALSE	canonical	3	568	junction_1	66.5187943366384	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTGTGTTATTTCAAG	2	True	NA	-17	True	CATAAA	-15	NA	27506769	27494417	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_27498805_27499358_27499569_27501494_27501567_27501801_27501921_27506715
H1_mix_00013943	chr11	-	786	3	FSM	ENSG00000254934.5	ENST00000527083.5	786	3	0	0	0	0	multi-exon	FALSE	canonical	3	525	junction_1	541	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGTCTTTAATATTTTT	1203	False	NA	-32	True	AATAAA	-16	NA	27634522	27617625	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_27618024_27623949_27624146_27634330
H1_mix_00013944	chr11	-	1726	3	NNC	ENSG00000254934.5	novel	786	3	NA	NA	0	945	at_least_one_novel_splicesite	FALSE	canonical	3	295	junction_1	656	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCACACAGCTTCAGATATC	1203	False	NA	NA	False	ATTAAA	-17	NA	27634522	27616680	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_27618019_27623949_27624146_27634330
H1_mix_00013945	chr11	-	4364	3	NNC	ENSG00000254934.5	novel	786	3	NA	NA	4	3318	at_least_one_novel_splicesite	FALSE	canonical	3	293	junction_1	657	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCTTAAAATAGCCAATGA	1102	False	NA	34	True	AATAAA	-18	NA	27634623	27614307	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_27618183_27623949_27624146_27634330
H1_mix_00013946	chr11	-	4450	4	NNC	ENSG00000254934.5	novel	798	4	NA	NA	0	3488	at_least_one_novel_splicesite	FALSE	canonical	3	293	junction_2	602.741145840309	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTGTGGGCTCCAGACA	1098	False	NA	NA	False	AATGAA	-32	NA	27634627	27614137	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_27618024_27618111_27618183_27623949_27624146_27634330
H1_mix_00013947	chr11	-	903	4	NNC	ENSG00000254934.5	novel	786	3	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	canonical	3	260	junction_2	611.324427416045	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGTCTTTAATATTTTT	1153	False	NA	-32	True	AATAAA	-16	NA	27634572	27617625	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_27618024_27618111_27618179_27623949_27624146_27634330
H1_mix_00013948	chr11	-	614	2	NNC	ENSG00000254934.5	novel	786	3	NA	NA	2	-11116	at_least_one_novel_splicesite	FALSE	canonical	3	433	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTTTGGTGGTCTCTT	1205	False	NA	0	True	ATTAAA	-20	NA	27634520	27629108	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_27629533_27634330
H1_mix_00013949	chr11	-	4001	2	FSM	ENSG00000176697.20	ENST00000356660.9	3985	2	0	-16	0	16	multi-exon	FALSE	canonical	3	22	junction_1	0	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTCTCTTTACTGTAAA	-1	True	NA	-74	True	CATAAA	-18	NA	27700455	27654876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_27658586_27700163
H1_mix_00013951	chr11	-	3417	17	FSM	ENSG00000121621.7	ENST00000263181.7	3417	17	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_8	29.6750631844315	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTTTCTTGTCTCATT	-8	True	NA	-4	True	ATTAAA	-19	NA	28108156	28020618	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_28021283_28023740_28023851_28035386_28035495_28036216_28036665_28058925_28059162_28062394_28062517_28069258_28069424_28077006_28077170_28082855_28082969_28083168_28083244_28084631_28084809_28088523_28088722_28090616_28090728_28091408_28091514_28094642_28094801_28097622_28097994_28108063
H1_mix_00013952	chr11	-	378	1	FSM	ENSG00000271332.1	ENST00000605824.1	298	1	-86	6	-86	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGCCTATAATGTATGAC	NA	False	NA	NA	False	NA	NA	NA	28145290	28144912	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_28144900_28145300
H1_mix_00013954	chr11	-	469	4	FSM	ENSG00000148950.11	ENST00000526776.5	469	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	141.563491841019	1848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAGTTGTTTTTAATTG	-1	True	NA	-39	True	AATAAA	-15	NA	31509574	31432400	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_31432569_31433459_31433571_31463171_31463306_31509518
H1_mix_00013955	chr11	-	478	4	NIC	ENSG00000148950.11	novel	733	6	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_3	147.060833973186	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAGTTGTTTTTAATTG	21	True	NA	-39	True	AATAAA	-15	NA	31509590	31432400	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_31432569_31433459_31433571_31456259_31456387_31509518
H1_mix_00013956	chr11	-	733	6	FSM	ENSG00000148950.11	ENST00000532287.6	733	6	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	108.333928203495	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAGTTGTTTTTAATTG	-11	True	NA	-39	True	AATAAA	-15	NA	31509622	31432400	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_31432569_31433459_31433571_31456259_31456387_31460625_31460715_31463171_31463306_31509518
H1_mix_00013957	chr11	-	314	3	FSM	ENSG00000148950.11	ENST00000533642.1	314	3	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_2	63	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCTTTTGACTTGATTA	NA	False	NA	-131	True	NA	NA	NA	31509645	31432492	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_31432569_31433459_31433571_31509518
H1_mix_00013958	chr11	-	486	5	FSM	ENSG00000148950.11	ENST00000527184.5	486	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	38.8675635974266	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATGGCATACTGCTAATG	19	True	NA	NA	False	NA	NA	NA	31509592	31449029	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_31449092_31456259_31456387_31460625_31460715_31463171_31463306_31509518
H1_mix_00013959	chr11	-	1067	3	FSM	ENSG00000148950.11	ENST00000528161.5	1067	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAACTCCCATGACACCA	48	False	NA	NA	False	NA	NA	NA	31509563	31452197	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_31453093_31456259_31456387_31509518
H1_mix_00013961	chr11	-	739	2	FSM	ENSG00000148950.11	ENST00000532668.1	735	2	0	-4	0	4	multi-exon	FALSE	canonical	3	10	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGACACCTATATTTTTT	3	True	NA	NA	False	AATAAA	-16	NA	31509608	31477110	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_31477760_31509518
H1_mix_00013963	chr11	-	384	3	FSM	ENSG00000007372.25	ENST00000527769.5	487	3	103	0	-24	0	multi-exon	FALSE	canonical	3	9	junction_2	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGAGGACACAGGGACTCG	6938	False	NA	NA	False	NA	NA	NA	31811015	31806343	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_31806463_31806848_31806926_31810827
H1_mix_00013964	chr11	-	3962	1	FSM	ENSG00000213713.3	ENST00000527583.1	895	1	-171	-2896	-171	2896	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGACGAGGATCTTACTCAG	9587	False	NA	NA	False	NA	NA	NA	33076631	33072669	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_33072700_33076600
H1_mix_00013965	chr11	-	3000	22	FSM	ENSG00000176102.13	ENST00000524827.6	2911	22	14	-103	0	92	multi-exon	FALSE	canonical	3	26	junction_21	115.856193603846	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCATCTTGTATTTACT	0	True	NA	66	True	AATAAA	-15	NA	33161480	33084491	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_33085290_33085712_33085774_33085894_33085990_33086987_33087142_33090531_33090728_33092270_33092341_33096305_33096409_33096834_33096979_33098689_33098765_33099033_33099151_33099607_33099718_33102176_33102340_33103106_33103185_33105566_33105694_33105882_33105918_33105997_33106065_33107902_33108001_33108385_33108419_33141666_33141763_33141884_33141987_33156707_33156804_33161298
H1_mix_00013966	chr11	-	2812	21	FSM	ENSG00000176102.13	ENST00000323959.9	2812	21	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_10	119.590081110433	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGCTTCCTCTGCTTCTT	0	True	NA	-26	True	AATAAA	-15	NA	33161480	33084583	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_33085290_33085712_33085774_33085894_33085990_33086987_33087142_33090531_33090728_33092270_33092341_33096305_33096409_33096834_33096979_33098689_33098765_33099033_33099151_33099607_33099718_33102176_33102340_33103106_33103185_33105566_33105694_33105882_33105918_33105997_33106065_33107902_33108001_33108385_33108419_33141666_33141763_33141884_33141987_33161298
H1_mix_00013967	chr11	-	4378	3	FSM	ENSG00000176102.13	ENST00000438862.6	1132	3	51	-3297	0	-3256	multi-exon	FALSE	canonical	3	616	junction_2	23	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTATCTAGTTTCTTA	0	True	NA	NA	False	TTTAAA	-11	NA	33161480	33137668	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_33141763_33141884_33141987_33161298
H1_mix_00013968	chr11	-	715	2	FSM	ENSG00000176102.13	ENST00000431742.2	715	2	0	0	0	0	multi-exon	FALSE	canonical	3	616	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGTTGCAACAACATTAAAA	-11	True	NA	16	True	NA	NA	NA	33161491	33141464	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_33141987_33161298
H1_mix_00013969	chr11	-	767	2	FSM	ENSG00000205177.7	ENST00000379011.5	836	2	70	-1	70	1	multi-exon	FALSE	canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATGGTCTCTCTCCTCTC	9560	False	NA	NA	False	NA	NA	NA	33700756	33698259	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_33698515_33700244
H1_mix_00013970	chr11	-	7552	4	FSM	ENSG00000085063.17	ENST00000642928.2	7563	4	0	11	0	-9	multi-exon	FALSE	canonical	3	307	junction_3	82.2692057954993	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTCTAAGGGCCTTTA	-3	True	NA	NA	False	AATATA	-14	NA	33736423	33703020	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_33710344_33717369_33717472_33722378_33722464_33736381
H1_mix_00013971	chr11	-	1034	5	FSM	ENSG00000085063.17	ENST00000351554.8	678	5	5	-361	5	0	multi-exon	FALSE	canonical	3	48	junction_4	210.182063935056	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACAACAAGATCCTTAATG	NA	False	NA	NA	False	NA	NA	NA	33736474	33709634	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_33710344_33717369_33717472_33722378_33722464_33731423_33731469_33736381
H1_mix_00013972	chr11	-	5798	10	FSM	ENSG00000110429.14	ENST00000526785.5	5798	10	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	40.2575044763913	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTGTATAATTGCTTAT	165	False	NA	2	True	TTTAAA	-24	NA	33774347	33740938	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_33742085_33747129_33747321_33748776_33748893_33750538_33750662_33751522_33751608_33754454_33754501_33755770_33755976_33758486_33758602_33768850_33769015_33770740
H1_mix_00013973	chr11	-	2470	11	FSM	ENSG00000110429.14	ENST00000265651.8	2403	11	16	-83	0	78	multi-exon	TRUE	canonical	3	153	junction_1	41.4077287471796	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTGACCTGCTGCAAAAG	8	True	NA	80	True	NA	NA	NA	33774504	33740860	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_33742085_33747129_33747321_33748776_33748893_33750538_33750662_33751522_33751608_33754454_33754501_33755770_33755976_33758486_33758602_33768850_33769015_33770740_33770831_33774393
H1_mix_00013974	chr11	-	1672	10	FSM	ENSG00000110429.14	ENST00000448981.6	1672	10	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_4	31.1555238547945	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTGTGGATGTGTAC	NA	False	NA	NA	False	AATAAA	-33	NA	33774543	33746742	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_33747321_33748776_33748893_33750538_33750662_33751522_33751608_33754454_33754501_33755770_33755976_33758486_33758602_33768850_33769015_33770740_33770831_33774393
H1_mix_00013975	chr11	-	1925	3	FSM	ENSG00000135363.12	ENST00000395833.7	1687	3	-238	0	-238	0	multi-exon	FALSE	canonical	3	14	junction_1	0.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTGTTGTTTATTTGAT	500	False	NA	NA	False	AATAAA	-16	NA	33870054	33858575	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_33859576_33864601_33864818_33869345
H1_mix_00013976	chr11	-	4905	17	FSM	ENSG00000166016.6	ENST00000435224.3	4905	17	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_15	3.65504787930336	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCCTCACTGCTCCTG	-3	True	NA	0	True	AATAAA	-17	NA	34358010	34150986	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_34152585_34154264_34154379_34154700_34154770_34159295_34159387_34159905_34160009_34160247_34160354_34160902_34161082_34162575_34162806_34164685_34164822_34165259_34165357_34167258_34167361_34167902_34167993_34170905_34171072_34173154_34173308_34197324_34197539_34204543_34204691_34356700
H1_mix_00013978	chr11	-	1248	7	FSM	ENSG00000149089.13	ENST00000395787.4	1246	7	0	-2	0	2	multi-exon	FALSE	canonical	3	171	junction_6	68.5599899520283	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCCTCAATGTTAATGTC	-25	True	NA	-8	True	AATAAA	-23	NA	34916379	34882292	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_34882817_34883336_34883505_34888292_34888429_34888751_34888870_34890503_34890553_34895009_34895111_34916227
H1_mix_00013979	chr11	-	1042	6	FSM	ENSG00000149089.13	ENST00000527830.1	1042	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_5	104.396168512068	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTCATTGTGGAATGAGC	3	True	NA	-12	True	AATAAA	-15	NA	34916351	34882369	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_34882817_34883336_34883505_34888292_34888429_34888751_34888870_34890503_34890553_34916227
H1_mix_00013980	chr11	-	1236	8	NNC	ENSG00000149089.13	novel	1246	7	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_7	131.031075921488	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCCTCATTGTGGAATGA	3	True	NA	-14	True	AATAAA	-13	NA	34916351	34882371	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_34882817_34883336_34883505_34888292_34888429_34888751_34888870_34890503_34890553_34895009_34895111_34896760_34896856_34916227
H1_mix_00013981	chr11	-	4853	5	ISM	ENSG00000149089.13	ENST00000527830.1	1042	6	21864	0	-3746	0	3prime_fragment	FALSE	canonical	3	292	junction_3	19.6897816138219	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTCATTGTGGAATGAGC	NA	False	NA	-12	True	AATAAA	-15	NA	34894487	34882369	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_34882817_34883336_34883505_34888292_34888429_34888751_34888870_34890503
H1_mix_00013982	chr11	-	2940	11	FSM	ENSG00000149090.13	ENST00000619888.5	2723	11	-208	-9	-89	5	multi-exon	FALSE	canonical	3	87	junction_5	15.2921548514263	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTCTTATTTCTGCACA	4383	False	NA	NA	False	AATAAA	-37	NA	35525824	35431817	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_35432893_35434511_35434805_35435902_35436136_35439626_35439694_35441480_35441694_35468000_35468109_35470600_35470819_35474629_35474745_35492044_35492174_35494095_35494273_35525512
H1_mix_00013983	chr11	-	2790	12	FSM	ENSG00000149090.13	ENST00000622144.4	2785	12	0	-5	0	5	multi-exon	FALSE	canonical	3	14	junction_5	38.8244619148187	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTCTTATTTCTGCACA	1	True	NA	NA	False	AATAAA	-37	NA	35525623	35431817	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_35432893_35434511_35434805_35435902_35436136_35439626_35439694_35441480_35441694_35451887_35451939_35468000_35468109_35470600_35470819_35474629_35474745_35492044_35492174_35494095_35494273_35525512
H1_mix_00013984	chr11	-	2949	6	FSM	ENSG00000110442.12	ENST00000263401.10	2949	6	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_2	26.55861442169	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCGTGATCATTTAAGGCA	-3	True	NA	NA	False	AATAAA	-17	NA	36289424	36272291	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_36274773_36276136_36276241_36277088_36277124_36278476_36278617_36280711_36280838_36289361
H1_mix_00013985	chr11	-	2770	5	FSM	ENSG00000110442.12	ENST00000452374.6	917	5	21	-1874	0	-57	multi-exon	FALSE	canonical	3	9	junction_4	155.584382249633	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGCAGAGGGCATTTGATAA	-7	True	NA	NA	False	AATAGA	-17	NA	36289428	36272348	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_36274773_36276136_36276241_36277088_36277124_36278476_36278617_36289361
H1_mix_00013987	chr11	-	7898	7	FSM	ENSG00000175104.15	ENST00000526995.6	7885	7	0	-13	0	13	multi-exon	FALSE	canonical	1	30	junction_3	15.2032525759749	157	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTTTTGTTAGTTTGTT	-6	True	NA	2	True	ATTAAA	-34	NA	36510272	36483755	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_36490651_36492550_36492629_36494975_36495048_36497107_36497267_36498489_36498641_36501219_36501538_36510047
H1_mix_00013989	chr11	-	3344	7	FSM	ENSG00000175274.19	ENST00000525680.6	3344	7	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_6	69.2950615524336	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGCGTCCTGTTTTAT	1	True	NA	-2	True	AAGAAA	-30	NA	44950883	44932347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_44935018_44935560_44935663_44936802_44936900_44937303_44937353_44937554_44937614_44938206_44938367_44950676
H1_mix_00013990	chr11	-	3633	8	FSM	ENSG00000175274.19	ENST00000308212.9	3683	8	50	0	33	0	multi-exon	FALSE	canonical	3	9	junction_7	150.828054554901	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGCGTCCTGTTTTAT	NA	False	NA	-2	True	AAGAAA	-30	NA	44951256	44932347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_44935018_44935560_44935663_44936802_44936900_44937303_44937353_44937554_44937614_44938206_44938367_44939165_44939282_44950876
H1_mix_00013991	chr11	-	3517	7	FSM	ENSG00000175274.19	ENST00000616990.4	3567	7	50	0	33	0	multi-exon	FALSE	canonical	3	57	junction_6	119.728396334741	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGCGTCCTGTTTTAT	NA	False	NA	-2	True	AAGAAA	-30	NA	44951256	44932347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_44935018_44935560_44935663_44936802_44936900_44937303_44937353_44937554_44937614_44938206_44938367_44950876
H1_mix_00013993	chr11	-	602	5	FSM	ENSG00000175274.19	ENST00000530035.5	602	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	174.166586921832	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCCCCCACCCCCAGCC	-10	True	NA	NA	False	NA	NA	NA	44950894	44937303	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_44937353_44937554_44937614_44938206_44938367_44939165_44939282_44950676
H1_mix_00013994	chr11	-	5460	6	FSM	ENSG00000019505.8	ENST00000020926.8	5165	6	23	-318	23	318	multi-exon	FALSE	canonical	3	16	junction_4	8.97997772825746	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATGCAGCTCCAGTTTAT	-12	True	NA	NA	False	ATTAAA	-24	NA	45286318	45239983	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_45244357_45246382_45246513_45252420_45252723_45254269_45254405_45255665_45255892_45286024
H1_mix_00013995	chr11	-	3877	4	FSM	ENSG00000175264.8	ENST00000308064.7	3906	4	0	29	0	-29	multi-exon	FALSE	canonical	2	9	junction_3	1.24721912892465	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAATACATTCACAACGT	-1	True	NA	NA	False	NA	NA	NA	45665622	45647717	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_45650966_45651992_45652091_45652520_45652607_45665177
H1_mix_00013996	chr11	-	1669	11	FSM	ENSG00000121680.16	ENST00000378750.10	1668	11	0	-1	0	1	multi-exon	FALSE	canonical	3	175	junction_5	26.0124969966361	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATCGGGCACTGGCCAGC	2	True	NA	NA	False	AGTAAA	-24	NA	45917877	45909661	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_45910313_45910897_45910963_45913818_45913939_45914130_45914204_45914315_45914469_45914603_45914685_45915467_45915569_45915702_45915837_45916226_45916304_45917457_45917494_45917699
H1_mix_00013998	chr11	-	1639	11	FSM	ENSG00000121680.16	ENST00000532681.5	1639	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_10	66.3633181810554	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCCCTAATAAAACTGACT	8	True	NA	-36	True	NA	NA	NA	45918812	45910204	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_45910313_45910897_45910963_45913818_45913939_45914130_45914204_45914315_45914469_45914603_45914685_45915467_45915569_45915702_45915837_45916226_45916304_45917457_45917494_45918121
H1_mix_00014000	chr11	-	7452	19	FSM	ENSG00000135365.17	ENST00000676320.1	7451	19	0	-1	0	1	multi-exon	FALSE	canonical	3	22	junction_17	24.3475351757791	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCATGGTGTTGGGTTTGG	-10	True	NA	-2	True	AATAAA	-20	NA	46121454	45929317	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_45934226_45935635_45935740_45936493_45936570_45938156_45938313_45945839_45946004_45948885_45948947_45949401_45949482_45950205_45950258_45953526_45953626_45965314_45965609_45969814_45969905_45971115_45971368_45979759_45979967_46076753_46076820_46079133_46079167_46084165_46084303_46090454_46090567_46092182_46092224_46120934
H1_mix_00014001	chr11	-	3675	18	FSM	ENSG00000135365.17	ENST00000323180.10	3675	18	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	28.6915345049569	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAATGCCGTGTAGTTAT	266	False	NA	-6	True	ATTAAA	-17	NA	46121178	45932565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_45934226_45935635_45935740_45936493_45936570_45938156_45938313_45946075_45946099_45948885_45948947_45949401_45949482_45950205_45950258_45953526_45953626_45965314_45965609_45969814_45969905_45971115_45971368_45979759_45979967_46076753_46076820_46079133_46079167_46084165_46084303_46092182_46092224_46120934
H1_mix_00014008	chr11	-	4979	19	NIC	ENSG00000110497.15	novel	5023	19	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	42	junction_12	18.4113659205863	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTCCTCTCTCTTATTT	11	True	NA	-4	True	ATTAAA	-20	NA	46594021	46396411	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_46397944_46408512_46408707_46410275_46410369_46417912_46418053_46433473_46433629_46434848_46435038_46443487_46443599_46493607_46493709_46494123_46494205_46508190_46508371_46512726_46512814_46541944_46542982_46543251_46543399_46543974_46544042_46545603_46545777_46547112_46547297_46547816_46547876_46548245_46548501_46593827
H1_mix_00014009	chr11	-	5069	17	FSM	ENSG00000110497.15	ENST00000534300.5	5067	17	0	-2	0	2	multi-exon	FALSE	canonical	3	8	junction_9	22.8988946239769	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTCCTCTCTCTTATTT	11	True	NA	-4	True	ATTAAA	-20	NA	46594021	46396411	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_46397944_46408512_46408707_46410275_46410369_46417912_46418053_46433473_46433629_46434848_46435038_46443487_46443599_46493607_46493709_46494123_46494205_46512726_46512814_46541944_46543399_46543974_46544042_46545603_46545777_46547112_46547297_46547816_46547876_46548245_46548501_46593827
H1_mix_00014010	chr11	-	5263	18	FSM	ENSG00000110497.15	ENST00000683756.1	5249	18	-14	0	8	0	multi-exon	FALSE	canonical	3	43	junction_10	16.7751257608001	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGCTCCTCTCTCTTAT	-5	True	NA	-6	True	ATTAAA	-18	NA	46594037	46396413	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_46397944_46408512_46408707_46410275_46410369_46417912_46418053_46433473_46433629_46434848_46435038_46443487_46443599_46493607_46493709_46494123_46494205_46508190_46508371_46512726_46512814_46541944_46543399_46543974_46544042_46545603_46545777_46547112_46547297_46547816_46547876_46548245_46548501_46593827
H1_mix_00014011	chr11	-	4102	17	FSM	ENSG00000110497.15	ENST00000528950.1	4102	17	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_16	25.2381624479676	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAAACGTTGCACTGGTG	-13	True	NA	NA	False	NA	NA	NA	46594045	46397449	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_46397944_46408512_46408707_46410275_46410369_46417912_46418053_46433473_46433629_46434848_46435038_46443487_46443599_46493607_46493709_46494123_46494205_46508190_46508371_46541944_46543399_46543974_46544042_46545603_46545777_46547112_46547297_46547816_46547876_46548245_46548455_46593827
H1_mix_00014012	chr11	-	498	1	FSM	ENSG00000244313.3	ENST00000467930.1	498	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGAGAGGATTCTTTTG	NA	False	NA	-60	True	NA	NA	NA	46429150	46428652	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_46428700_46429200
H1_mix_00014013	chr11	-	3812	3	NIC	ENSG00000180423.4	novel	1967	3	NA	NA	-9	1593	combination_of_known_junctions	FALSE	canonical	3	25	junction_2	13	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTGCTGTTTTATTTCT	1043	False	NA	-2	True	AATAAA	-44	NA	46616858	46601267	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_46603910_46615567_46616382_46616502
H1_mix_00014014	chr11	-	1967	3	FSM	ENSG00000180423.4	ENST00000326737.3	1967	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	12.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-23	True	NA	NA	False	NA	NA	NA	46617227	46602860	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_46603910_46615567_46616382_46617123
H1_mix_00014015	chr11	-	1673	3	NNC	ENSG00000180423.4	novel	1967	3	NA	NA	66	-454	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	25	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTACTATCCAGTGAACT	740	False	NA	-16	True	ATTAAA	-20	NA	46617161	46603314	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_46603910_46615567_46616382_46616897
H1_mix_00014016	chr11	-	3395	13	FSM	ENSG00000175220.12	ENST00000311956.9	3395	13	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_2	53.7656308021728	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTCATCTGGATGTTGGG	-19	True	NA	-12	True	AATAAA	-16	NA	46700619	46677079	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_46679226_46679364_46679469_46679647_46679777_46680204_46680283_46680486_46680564_46680639_46680748_46681010_46681110_46681292_46681380_46682050_46682183_46688172_46688261_46695659_46695756_46695974_46696157_46700550
H1_mix_00014017	chr11	-	1000	11	FSM	ENSG00000175220.12	ENST00000528837.5	1000	11	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_8	129.433535067231	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAGTGACCAGAACAAGAT	4567	False	NA	NA	False	NA	NA	NA	46696099	46679216	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_46679226_46679364_46679469_46679647_46679777_46680204_46680283_46680486_46680564_46680639_46680748_46681010_46681110_46681292_46681380_46688172_46688261_46695659_46695756_46695974
H1_mix_00014019	chr11	-	7730	44	FSM	ENSG00000175216.15	ENST00000529230.6	7172	44	0	-558	0	558	multi-exon	FALSE	canonical	3	810	junction_28	90.5203454297571	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGAGCCCAGGAGGTCAA	-12	True	NA	NA	False	NA	NA	NA	46846280	46742489	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_46744266_46744425_46744578_46750273_46750434_46750527_46750612_46751117_46751256_46751345_46751535_46752634_46752711_46753309_46753498_46754887_46755068_46758922_46759044_46759268_46759443_46760611_46760785_46761999_46762194_46762626_46762763_46762975_46763180_46763480_46763631_46765130_46765257_46767574_46767664_46769962_46770099_46770787_46770983_46776254_46776384_46777438_46777553_46778138_46778314_46778459_46778600_46780193_46780320_46780427_46780486_46783273_46783369_46784487_46784674_46788680_46788774_46790075_46790187_46790469_46790584_46795593_46795777_46796811_46796941_46797804_46797970_46798082_46798173_46801199_46801305_46808030_46808145_46809399_46809501_46809741_46809875_46811006_46811179_46816197_46816405_46818309_46818504_46821174_46821269_46846219
H1_mix_00014021	chr11	-	8179	38	FSM	ENSG00000134569.10	ENST00000378623.6	8155	38	0	-24	0	24	multi-exon	TRUE	canonical	3	29	junction_30	10.849457947971	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCGAGGCCAGAGTTCCT	3	True	NA	NA	False	NA	NA	NA	46918550	46856692	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_46859316_46862605_46862748_46864447_46864536_46865118_46865187_46867978_46868115_46868599_46868714_46868987_46869133_46871524_46871634_46873099_46873235_46873374_46873594_46874799_46875104_46875455_46875682_46875803_46875967_46876465_46876638_46876743_46876831_46877198_46877340_46878906_46879039_46879125_46879316_46881701_46881904_46883870_46883977_46886090_46886173_46886324_46886534_46889410_46889534_46889943_46890121_46890276_46890495_46892972_46893130_46894588_46894820_46895165_46895292_46895883_46896019_46896209_46896336_46896868_46896995_46898557_46898678_46898903_46899033_46899386_46899504_46899862_46899977_46900261_46900379_46902782_46902930_46918327
H1_mix_00014022	chr11	-	3447	2	FSM	ENSG00000134569.10	ENST00000529604.1	2774	2	-673	0	-673	0	multi-exon	FALSE	canonical	3	87	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTTGCCTGGCTTGGAG	1863	False	NA	-8	True	TATAAA	-16	NA	46863606	46856869	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_46859316_46862605
H1_mix_00014024	chr11	-	2939	15	FSM	ENSG00000149182.15	ENST00000426335.6	2937	15	0	-2	0	2	multi-exon	FALSE	canonical	2	19	junction_11	120.766852459858	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTCTGGATCCTGCCTC	9860	False	NA	-2	True	AATAAA	-43	NA	47177125	47164296	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47165503_47166267_47166387_47166505_47166600_47166759_47166887_47167908_47168044_47168122_47168252_47171425_47171558_47171663_47171801_47172280_47172334_47173425_47173483_47173758_47173841_47175181_47175314_47175850_47175924_47176515_47176635_47176781
H1_mix_00014025	chr11	-	2384	12	NIC	ENSG00000149182.15	novel	2773	16	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_9	135.293192489069	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTCCTCTGGATCCTG	9579	False	NA	-6	True	AATAAA	-39	NA	47176845	47164300	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_47165503_47166267_47166387_47166505_47166600_47166759_47166887_47167908_47168044_47168122_47168252_47171425_47171558_47171663_47171801_47172280_47172334_47175850_47175924_47176515_47176635_47176781
H1_mix_00014026	chr11	-	2785	16	NIC	ENSG00000149182.15	novel	2773	16	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_11	116.81476314614	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTCCTCTGGATCCTG	9575	False	NA	-6	True	AATAAA	-39	NA	47176849	47164300	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_47165503_47166267_47166387_47166505_47166600_47166759_47166887_47167908_47168044_47168122_47168252_47171425_47171558_47171663_47171801_47172280_47172334_47173425_47173483_47173758_47173883_47175014_47175099_47175181_47175314_47175850_47175924_47176515_47176635_47176781
H1_mix_00014027	chr11	-	2777	16	FSM	ENSG00000149182.15	ENST00000524782.6	2773	16	0	-4	0	2	multi-exon	FALSE	canonical	3	371	junction_6	49.6429921204057	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTCTGGATCCTGCCTC	-5	True	NA	-2	True	AATAAA	-43	NA	47176879	47164296	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47165503_47166267_47166387_47166505_47166600_47166759_47166887_47167908_47168044_47168122_47168252_47171425_47171558_47171663_47171801_47172280_47172334_47173425_47173483_47173758_47173841_47175014_47175099_47175181_47175314_47175850_47175924_47176515_47176635_47176781
H1_mix_00014033	chr11	-	1873	11	FSM	ENSG00000165912.16	ENST00000298838.11	1873	11	0	0	0	0	multi-exon	FALSE	canonical	2	315	junction_3	69.1450648998177	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGGGCTCATGTGCATT	-10	True	NA	-5	True	ATTAAA	-38	NA	47186434	47177521	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47178047_47178365_47178488_47178893_47179031_47179158_47179280_47179410_47179587_47180185_47180342_47180454_47180691_47182402_47182560_47182673_47182765_47183003_47183070_47186348
H1_mix_00014035	chr11	-	362	1	FSM	ENSG00000243802.2	ENST00000473109.2	362	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAACAATTTTAATAAATTG	NA	False	NA	NA	False	NA	NA	NA	47191542	47191180	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47191200_47191500
H1_mix_00014036	chr11	-	2203	11	FSM	ENSG00000134575.13	ENST00000256997.9	2200	11	0	-3	0	0	multi-exon	TRUE	canonical	3	96	junction_6	15.9314155052211	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGTTTCCTGTGCTTTT	NA	False	NA	0	True	AATGAA	-27	NA	47248906	47239301	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47240250_47242722_47242899_47243017_47243125_47243238_47243322_47244734_47244868_47245304_47245395_47245473_47245573_47245681_47245835_47247640_47247728_47248037_47248134_47248675
H1_mix_00014037	chr11	-	1614	13	NNC	ENSG00000165916.9	novel	1540	12	NA	NA	-11	51020	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	630.643894937723	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAACCATCATCTATTTCC	NA	False	NA	NA	False	NA	NA	NA	47426484	47367748	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_47367778_47418774_47418946_47419115_47419198_47420263_47420410_47420630_47420728_47422573_47422723_47422829_47422974_47424045_47424184_47424428_47424492_47424606_47424712_47425120_47425247_47425866_47425951_47426204
H1_mix_00014038	chr11	-	1580	12	FSM	ENSG00000165916.9	ENST00000619920.4	1580	12	0	0	0	0	multi-exon	FALSE	canonical	3	2014	junction_11	141.657893100547	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTGTCTGCCTTCCCT	-25	True	NA	-3	True	AATAAA	-22	NA	47426473	47418768	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47418946_47419115_47419198_47420263_47420410_47420630_47420728_47422573_47422723_47422829_47422974_47424045_47424184_47424428_47424492_47424606_47424712_47425120_47425247_47425866_47425951_47426204
H1_mix_00014041	chr11	-	4621	14	FSM	ENSG00000149187.19	ENST00000310513.10	4583	14	-38	0	-23	0	multi-exon	FALSE	canonical	3	199	junction_1	107.557167955921	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTCAGAGTTACTGATT	5	True	NA	0	True	ATTAAA	-19	NA	47553155	47465932	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47468892_47472190_47472358_47473087_47473232_47475335_47475522_47476845_47476957_47477296_47477426_47478876_47478941_47482694_47482857_47483452_47483533_47484388_47484524_47486749_47486799_47487158_47487242_47488836_47489025_47552991
H1_mix_00014042	chr11	-	4654	14	NIC	ENSG00000149187.19	novel	2191	14	NA	NA	-51	1	combination_of_known_junctions	FALSE	canonical	3	199	junction_1	119.132117997044	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAACTGATGTCTTCAGA	NA	False	NA	-10	True	ATTAAA	-9	NA	47553183	47465942	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_47468892_47472190_47472358_47473087_47473232_47475335_47475522_47476845_47476960_47477296_47477426_47478876_47478953_47482694_47482857_47483452_47483533_47484388_47484524_47486749_47486799_47487158_47487242_47488836_47489025_47552991
H1_mix_00014044	chr11	-	7780	14	NIC	ENSG00000149187.19	novel	4583	14	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	176	junction_1	111.232152348034	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGAAGAACTGATGTCTT	43	False	NA	-14	True	ATTAAA	-5	NA	47553117	47465946	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_47472103_47472190_47472358_47473087_47473232_47475335_47475522_47476845_47476957_47477296_47477426_47478876_47478941_47482694_47482857_47483452_47483533_47484388_47484524_47486749_47486799_47487158_47487242_47488836_47489025_47552991
H1_mix_00014045	chr11	-	2108	13	FSM	ENSG00000149187.19	ENST00000358597.7	2108	13	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	114.881914010286	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTTTCCTTTTTGACCG	5576	False	NA	NA	False	NA	NA	NA	47489014	47468283	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47468892_47472190_47472358_47473087_47473232_47475335_47475522_47476845_47476957_47477296_47477426_47478876_47478953_47482694_47482857_47483452_47483533_47484388_47484524_47486749_47486799_47487158_47487242_47488836
H1_mix_00014047	chr11	-	7844	14	NIC	ENSG00000149187.19	novel	4583	14	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	176	junction_1	114.679073683163	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTCAGAGTTACTGATT	5	True	NA	0	True	ATTAAA	-19	NA	47553155	47465932	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_47472103_47472190_47472358_47473087_47473232_47475335_47475522_47476845_47476957_47477296_47477426_47478876_47478953_47482694_47482857_47483452_47483533_47484388_47484524_47486749_47486799_47487158_47487242_47488836_47489025_47552991
H1_mix_00014053	chr11	-	2461	4	FSM	ENSG00000123444.14	ENST00000395288.6	2460	4	0	-1	0	0	multi-exon	FALSE	canonical	3	17	junction_3	64.0433880705538	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTCTGTGTTGAAT	7	True	NA	-1	True	AATAAA	-15	NA	47578969	47572196	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47573791_47575592_47575700_47577410_47578029_47578827
H1_mix_00014054	chr11	-	2357	4	FSM	ENSG00000123444.14	ENST00000430070.7	2357	4	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_3	29.0325487838889	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTCTGTGTTGAAT	6	True	NA	-1	True	AATAAA	-15	NA	47578970	47572196	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47573791_47575592_47575700_47577410_47578029_47578932
H1_mix_00014055	chr11	-	3080	3	FSM	ENSG00000123444.14	ENST00000533290.5	3079	3	0	-1	0	0	multi-exon	FALSE	canonical	3	134	junction_2	16	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTCTGTGTTGAAT	228	False	NA	-1	True	AATAAA	-15	NA	47578789	47572196	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47573791_47575592_47575700_47577410
H1_mix_00014056	chr11	-	764	2	FSM	ENSG00000123444.14	ENST00000529499.1	764	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGGAGGGGACACACCATA	78	False	NA	NA	False	NA	NA	NA	47578939	47577403	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47578056_47578827
H1_mix_00014058	chr11	-	1413	2	FSM	ENSG00000172247.4	ENST00000302514.4	1413	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCCTGCGCTGTCTTGAC	5	True	NA	-4	True	AATAAA	-36	NA	47594411	47589666	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47590816_47594147
H1_mix_00014062	chr11	-	472	5	FSM	ENSG00000165923.17	ENST00000530577.5	552	5	80	0	80	0	multi-exon	FALSE	canonical	1	5	junction_2	2.91547594742265	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCCTAAAGGAAATGAAAAG	7658	False	NA	NA	False	NA	NA	NA	47714347	47699520	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47699554_47704542_47704729_47705863_47705918_47710376_47710512_47714283
H1_mix_00014063	chr11	-	305	2	FSM	ENSG00000165923.17	ENST00000425363.2	305	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCTCCAATATTATGGCT	7118	False	NA	NA	False	NA	NA	NA	47714887	47714312	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47714348_47714617
H1_mix_00014064	chr11	-	4018	17	NNC	ENSG00000109920.13	novel	4035	17	NA	NA	0	-23	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_16	45.0525734559082	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTATCCTTTTGCTCGT	-10	True	NA	-32	True	AATAAA	-20	NA	47767341	47716516	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_47717513_47719928_47720087_47722975_47723317_47724027_47724173_47724467_47724779_47731373_47731562_47732536_47732671_47734024_47734130_47736615_47736741_47743952_47744164_47746055_47746395_47750915_47751037_47751142_47751291_47752915_47753103_47754527_47754665_47765269_47765363_47767062
H1_mix_00014065	chr11	-	4062	18	NNC	ENSG00000109920.13	novel	4035	17	NA	NA	1	-23	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_6	61.0689666288951	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTATCCTTTTGCTCGT	-1	True	NA	-32	True	AATAAA	-20	NA	47767285	47716516	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_47717513_47719928_47720087_47722975_47723317_47724027_47724173_47724467_47724779_47725736_47725837_47731373_47731562_47732536_47732671_47734024_47734130_47736615_47736741_47743952_47744164_47746055_47746395_47750915_47751037_47751142_47751291_47752915_47753103_47754527_47754665_47765269_47765363_47767062
H1_mix_00014066	chr11	-	4060	18	NIC	ENSG00000109920.13	novel	4035	17	NA	NA	0	-23	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	60.1067677504935	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTATCCTTTTGCTCGT	-2	True	NA	-32	True	AATAAA	-20	NA	47767286	47716516	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_47717513_47719928_47720087_47722975_47723317_47724027_47724173_47724467_47724779_47731373_47731562_47732116_47732220_47732536_47732671_47734024_47734130_47736615_47736741_47743952_47744164_47746055_47746395_47750915_47751037_47751142_47751291_47752915_47753103_47754527_47754665_47765269_47765363_47767068
H1_mix_00014067	chr11	-	4166	19	NNC	ENSG00000109920.13	novel	4035	17	NA	NA	0	-23	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_6	65.8141087729694	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTATCCTTTTGCTCGT	-2	True	NA	-32	True	AATAAA	-20	NA	47767286	47716516	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_47717513_47719928_47720087_47722975_47723317_47724027_47724173_47724467_47724779_47725736_47725837_47731373_47731562_47732116_47732220_47732536_47732671_47734024_47734130_47736615_47736741_47743952_47744164_47746055_47746395_47750915_47751037_47751142_47751291_47752915_47753103_47754527_47754665_47765269_47765363_47767062
H1_mix_00014070	chr11	-	5380	36	FSM	ENSG00000030066.13	ENST00000378460.6	5376	36	0	-4	0	4	multi-exon	FALSE	canonical	3	634	junction_30	82.9448304474678	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGGTGTGTGTTTCTTTT	87	False	NA	1	True	NA	NA	NA	47848467	47778082	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47779195_47780342_47780448_47783072_47783199_47784921_47785064_47786452_47786555_47788181_47788306_47788500_47788612_47791929_47791991_47792785_47792947_47797778_47797885_47797977_47798075_47798167_47798263_47798367_47798464_47801810_47801931_47803437_47803537_47804548_47804619_47806152_47806313_47807069_47807141_47808395_47808530_47812063_47812225_47812301_47812430_47812881_47813048_47813315_47813416_47815478_47815650_47815945_47816030_47818055_47818125_47819373_47819459_47821723_47821822_47822086_47822165_47835650_47835810_47836886_47837002_47837544_47837624_47839842_47840066_47840377_47840589_47847847_47847960_47848218
H1_mix_00014071	chr11	-	4138	28	FSM	ENSG00000030066.13	ENST00000528071.5	4138	28	0	0	0	0	multi-exon	FALSE	canonical	3	634	junction_22	72.6994489425003	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTGTTTTGTTTTATCA	4	True	NA	3	True	AATAAA	-22	NA	47848334	47792011	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47792947_47797778_47797885_47797977_47798075_47798167_47798263_47798367_47798464_47801810_47801931_47803437_47803537_47804548_47804619_47806152_47806313_47807069_47807141_47808395_47808530_47812063_47812225_47812301_47812430_47812881_47813048_47813315_47813416_47815478_47815650_47815945_47816030_47818055_47818125_47819373_47819459_47821723_47821822_47822086_47822165_47835650_47835810_47836886_47837002_47837544_47837624_47839842_47840066_47840377_47840589_47847847_47847960_47848218
H1_mix_00014073	chr11	-	1557	3	FSM	ENSG00000030066.13	ENST00000526870.1	1537	3	0	-20	0	20	multi-exon	FALSE	canonical	3	746	junction_1	82.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGTATTAGCTTTCTAT	-1	True	NA	18	True	ATTAAA	-37	NA	47848555	47839480	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47840589_47847847_47847960_47848218
H1_mix_00014074	chr11	-	1102	1	FSM	ENSG00000226268.3	ENST00000526165.1	959	1	-68	-75	-68	75	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGCTTAGGGCTTAGG	NA	False	NA	NA	False	AATAAA	-37	NA	49434506	49433404	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_49433400_49434500
H1_mix_00014075	chr11	-	3832	1	FSM	ENSG00000134817.12	ENST00000606794.2	3660	1	-160	-12	-160	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCTCTTCTCATGAAAGT	-6	True	NA	8	True	AATAAA	-26	NA	57237410	57233578	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_57233600_57237400
H1_mix_00014076	chr11	-	5833	12	FSM	ENSG00000149115.14	ENST00000358252.8	5820	12	0	-13	0	9	multi-exon	FALSE	canonical	3	233	junction_11	96.0424320825466	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTGGTACGTGGTCATG	-19	True	NA	-9	True	AATAAA	-30	NA	57324952	57299628	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_57300082_57300527_57300601_57300883_57301042_57301806_57301944_57302073_57302225_57302458_57302826_57308394_57310557_57312533_57313890_57317817_57317888_57320078_57320713_57321791_57321951_57324839
H1_mix_00014077	chr11	-	1946	6	FSM	ENSG00000149115.14	ENST00000427750.2	1946	6	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_5	41.3956519455848	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCCACTTGAAACAATAAATA	8084	False	NA	-56	True	NA	NA	NA	57303479	57299675	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_57300082_57300527_57300601_57300883_57301042_57301806_57301944_57302073_57302225_57302458
H1_mix_00014080	chr11	-	2641	14	FSM	ENSG00000134802.18	ENST00000395123.6	2619	14	0	-22	0	22	multi-exon	FALSE	canonical	3	12	junction_13	42.8783886476364	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGGCCGGGGCTGTGTG	5955	False	NA	21	True	AATAAA	-42	NA	57426945	57406931	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_57407897_57409174_57409299_57409934_57410122_57414614_57414732_57414932_57415107_57416572_57416671_57417747_57417888_57420971_57421065_57421296_57421374_57423981_57424029_57425540_57425671_57425988_57426353_57426587_57426653_57426885
H1_mix_00014081	chr11	-	2641	14	FSM	ENSG00000134802.18	ENST00000395124.6	2619	14	0	-22	0	22	multi-exon	FALSE	canonical	3	120	junction_5	20.4765705338663	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGGCCGGGGCTGTGTG	-11	True	NA	21	True	AATAAA	-42	NA	57427121	57406931	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_57407897_57409174_57409299_57409934_57410122_57414614_57414732_57414932_57415107_57416572_57416671_57417747_57417888_57420971_57421065_57421296_57421374_57423981_57424029_57425540_57425671_57425988_57426353_57426587_57426653_57427061
H1_mix_00014082	chr11	-	2707	14	NIC	ENSG00000134802.18	novel	2619	14	NA	NA	-51	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_12	34.6222215470364	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGTTTCCATCTCTCTA	5728	False	NA	-1	True	AATAAA	-20	NA	57427172	57406953	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_57407897_57409174_57409299_57409934_57410122_57414614_57414732_57414932_57415107_57416572_57416671_57417747_57417888_57420971_57421065_57421296_57421374_57423981_57424029_57425540_57425671_57425988_57426390_57426587_57426653_57427061
H1_mix_00014083	chr11	-	2514	15	FSM	ENSG00000149150.9	ENST00000278426.8	2514	15	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_14	19.233262004843	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTGGTGTGCGCCTGTC	27	True	NA	-5	True	AATAAA	-16	NA	57515702	57484533	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_57485243_57487094_57487219_57488915_57488990_57489250_57489393_57491223_57491363_57491590_57491627_57491715_57491863_57493992_57494172_57496030_57496165_57497752_57497846_57500778_57500856_57500987_57501044_57501151_57501330_57513957_57514125_57515443
H1_mix_00014084	chr11	-	3013	14	ISM	ENSG00000149150.9	ENST00000528450.5	2358	15	250	-249	-20	247	3prime_fragment	FALSE	canonical	3	91	junction_10	16.362028490727	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGGATTAGGACAGAATGC	1094	False	NA	NA	False	NA	NA	NA	57514635	57484286	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_57485243_57487094_57487219_57488915_57488990_57489250_57489393_57491223_57491363_57491590_57491627_57491715_57491863_57493992_57494172_57496030_57496165_57497752_57497846_57500778_57500856_57500987_57501044_57501151_57501330_57513957
H1_mix_00014086	chr11	-	2360	15	FSM	ENSG00000149150.9	ENST00000528450.5	2358	15	0	-2	0	0	multi-exon	FALSE	canonical	3	10	junction_14	32.8202432554504	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTGGTGTGCGCCTGTC	0	True	NA	-5	True	AATAAA	-16	NA	57514885	57484533	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_57485243_57487094_57487219_57488915_57488990_57489250_57489393_57491223_57491363_57491590_57491627_57491715_57491863_57493992_57494172_57496030_57496165_57497752_57497846_57500778_57500856_57500987_57501044_57501151_57501330_57513957_57514125_57514780
H1_mix_00014091	chr11	-	530	3	FSM	ENSG00000134809.9	ENST00000525158.1	530	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	693	241	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGAAGACTGCCAGGCC	8	True	NA	-18	True	AATAAA	-22	NA	57530734	57528640	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_57528919_57530118_57530294_57530657
H1_mix_00014092	chr11	-	1225	4	FSM	ENSG00000156587.16	ENST00000287156.9	1219	4	0	-6	0	0	multi-exon	FALSE	canonical	3	450	junction_3	70.4130669691358	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCAGCTGAGTCTTTGAT	-23	True	NA	-5	True	ATTAAA	-19	NA	57567672	57551655	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_57552510_57554436_57554624_57560336_57560433_57567584
H1_mix_00014093	chr11	-	1635	4	FSM	ENSG00000156587.16	ENST00000340573.8	1573	4	-41	-21	-41	21	multi-exon	FALSE	canonical	3	92	junction_3	237.885593417415	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGATGGGGTGGTTTCAT	-24	False	NA	16	True	ATTAAA	-40	NA	57568325	57551634	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_57552510_57554436_57554624_57560336_57560433_57567848
H1_mix_00014102	chr11	-	4746	15	NNC	ENSG00000110048.12	novel	4713	14	NA	NA	0	9905	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	116.948357694099	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCCACTCCACTCAAGGC	-23	True	NA	NA	False	AAAAAG	-2	NA	59615774	59564492	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_59564526_59574397_59576720_59576804_59577026_59578148_59578331_59580173_59580270_59581450_59581555_59593603_59593725_59594009_59594256_59600495_59600628_59600818_59600874_59601282_59601386_59601639_59601839_59608483_59608735_59610380_59610590_59615302
H1_mix_00014104	chr11	-	4130	19	FSM	ENSG00000166889.14	ENST00000300146.10	4129	19	0	-1	0	1	multi-exon	FALSE	canonical	3	69	junction_18	11.2717553706511	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCCTGCATTTCTACTT	-19	True	NA	-1	True	AATAAA	-23	NA	59669037	59636714	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_59638412_59639047_59639198_59639291_59639384_59642879_59643036_59647753_59647914_59649461_59649611_59650753_59650814_59651543_59651642_59652463_59652588_59652837_59653019_59653982_59654073_59655522_59655741_59655955_59656046_59656498_59656601_59657529_59657725_59658865_59658947_59659251_59659470_59666852_59666965_59668880
H1_mix_00014105	chr11	-	4203	20	NNC	ENSG00000166889.14	novel	4129	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_15	27.7297004687869	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCCTGCATTTCTACT	-19	True	NA	-2	True	AATAAA	-22	NA	59669037	59636715	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_59638412_59639047_59639198_59639291_59639384_59642879_59643036_59647753_59647914_59649461_59649611_59650753_59650814_59651543_59651642_59652463_59652588_59652837_59653019_59653982_59654073_59655522_59655741_59655955_59656046_59656498_59656601_59657079_59657154_59657529_59657725_59658865_59658947_59659251_59659470_59666852_59666965_59668880
H1_mix_00014106	chr11	-	405	1	FSM	ENSG00000234964.4	ENST00000524732.2	405	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAATTCCATCATCAC	NA	False	NA	NA	False	AAAAAG	-4	NA	59781722	59781317	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_59781300_59781700
H1_mix_00014107	chr11	-	1089	4	FSM	ENSG00000166902.5	ENST00000300151.5	1083	4	0	-6	0	6	multi-exon	FALSE	canonical	3	1020	junction_3	17.7200451466693	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCATTGGTCATTCTTAA	-13	True	NA	1	True	AATAAA	-27	NA	59810778	59806133	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_59806833_59807700_59807850_59809854_59809921_59810603
H1_mix_00014109	chr11	-	2338	16	FSM	ENSG00000110107.9	ENST00000227524.9	2337	16	0	-1	0	1	multi-exon	FALSE	canonical	3	45	junction_8	13.5882302011704	241	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCATGTCCCTGCGGTTC	1	True	NA	44	True	AATAAA	-21	NA	60906585	60890545	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_60891264_60897845_60897952_60898100_60898272_60898540_60898627_60898861_60898932_60899148_60899305_60900581_60900692_60900853_60900930_60901294_60901370_60901498_60901541_60902402_60902466_60902582_60902657_60902739_60902882_60903458_60903536_60903711_60903862_60906363
H1_mix_00014110	chr11	-	1831	7	FSM	ENSG00000110446.12	ENST00000541505.5	1807	7	0	-24	0	0	multi-exon	FALSE	canonical	3	27	junction_3	32.3505109009975	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGGGGGCCTGGATGGG	-3	True	NA	22	True	NA	NA	NA	60951646	60937059	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_60937374_60937869_60938026_60939479_60939639_60942034_60942146_60943688_60943837_60946531_60946822_60950993
H1_mix_00014111	chr11	-	2410	8	FSM	ENSG00000110446.12	ENST00000227880.8	2506	8	96	0	0	0	multi-exon	FALSE	canonical	3	61	junction_4	20.1139610363406	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGTCCATGACAAGGGG	494	False	NA	-2	True	CATAAA	-27	NA	60952080	60937083	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_60937374_60937869_60938026_60939479_60939639_60941121_60941291_60942034_60942146_60943688_60943837_60946531_60946822_60950993
H1_mix_00014112	chr11	-	2936	5	FSM	ENSG00000167987.11	ENST00000301765.10	2673	5	-261	-2	-72	2	multi-exon	FALSE	canonical	3	128	junction_4	16.9466073300823	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGTGGTGTTGCTGGGTT	-36	True	NA	-3	True	AATAAA	-18	NA	61161687	61130254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61132540_61133254_61133338_61134035_61134208_61138736_61138836_61161390
H1_mix_00014113	chr11	-	3383	19	NNC	ENSG00000167992.14	novel	3536	20	NA	NA	0	76310	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.6579960245931	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGGGGGACCTATAGCGA	-3	True	NA	NA	False	NA	NA	NA	61295316	61181975	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_61182007_61258289_61259313_61264486_61264578_61264955_61265039_61265121_61265213_61271674_61271761_61273198_61273317_61274498_61274585_61276592_61276681_61278393_61278477_61280623_61280718_61280792_61281236_61281785_61281915_61282788_61282906_61286313_61286431_61290798_61290928_61291263_61291354_61291481_61291577_61294927
H1_mix_00014114	chr11	-	2663	6	FSM	ENSG00000167992.14	ENST00000538438.1	1076	6	-574	-1013	-574	218	multi-exon	FALSE	canonical	3	55	junction_2	3.26190128606002	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTTCTTTTTTCTTTT	7143	False	NA	NA	False	NA	NA	NA	61269991	61258067	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61259313_61264486_61264578_61264955_61265039_61265121_61265213_61267461_61267545_61268921
H1_mix_00014115	chr11	-	3536	20	FSM	ENSG00000167992.14	ENST00000335613.10	3536	20	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	10.240866479961	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCACTGCTCATTCACC	-3	True	NA	-3	True	ATTAAA	-20	NA	61295316	61258285	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61259313_61264486_61264578_61264955_61265039_61265121_61265213_61267461_61267545_61268921_61269019_61271674_61271761_61273198_61273317_61274498_61274585_61276592_61276681_61278393_61278477_61280623_61280718_61280792_61281236_61281785_61281915_61282788_61282906_61286313_61286431_61290798_61290928_61291263_61291354_61291481_61291577_61294927
H1_mix_00014117	chr11	-	4249	27	FSM	ENSG00000167986.15	ENST00000301764.12	4245	27	0	-4	0	4	multi-exon	TRUE	canonical	2	1425	junction_2	182.168723404931	4418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTTTTTGCTTTTATT	9	True	NA	NA	False	AATAAA	-23	NA	61333105	61299446	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61300220_61300808_61300933_61302256_61302360_61302581_61302752_61303045_61303156_61303864_61304036_61308982_61309078_61309795_61309961_61310294_61310419_61311783_61311896_61311988_61312085_61313498_61313707_61313861_61313970_61314046_61314211_61314307_61314487_61316284_61316394_61316491_61316568_61321594_61321698_61322295_61322413_61323010_61323095_61323978_61324138_61325610_61325709_61326778_61326894_61329362_61329585_61329957_61330075_61331542_61331692_61332907
H1_mix_00014118	chr11	-	4476	26	FSM	ENSG00000167986.15	ENST00000680250.1	4459	26	0	-17	0	4	multi-exon	FALSE	canonical	2	1425	junction_2	176.224329761812	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTTTTTGCTTTTATT	4	True	NA	NA	False	AATAAA	-23	NA	61333110	61299446	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61300220_61300808_61300933_61302256_61302752_61303045_61303156_61303864_61304036_61308982_61309078_61309795_61309961_61310294_61310419_61311783_61311896_61311988_61312085_61313498_61313707_61313861_61313970_61314046_61314211_61314307_61314487_61316284_61316394_61316491_61316568_61321594_61321698_61322295_61322413_61323010_61323095_61323978_61324138_61325610_61325709_61326778_61326894_61329362_61329585_61329957_61330075_61331542_61331692_61332907
H1_mix_00014120	chr11	-	1016	6	FSM	ENSG00000167986.15	ENST00000539712.5	1020	6	4	0	4	0	multi-exon	FALSE	canonical	3	1747	junction_1	52.5417928890897	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGTTTCTAGATAAAAAAT	6908	False	NA	NA	False	TATAAA	-2	NA	61326893	61321254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61321698_61322295_61322413_61323010_61323095_61323978_61324138_61325610_61325709_61326778
H1_mix_00014124	chr11	-	1827	2	FSM	ENSG00000162144.10	ENST00000536452.1	1827	2	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGACCAGCTCCCCATCT	6038	False	NA	-86	True	NA	NA	NA	61351284	61348889	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61350423_61350990
H1_mix_00014125	chr11	-	4094	4	FSM	ENSG00000162144.10	ENST00000537364.5	4094	4	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_2	12.8149218578274	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGTGCAGTGGGGTCCC	1013	False	NA	NA	False	NA	NA	NA	61361264	61352985	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61353140_61353783_61353993_61356529_61356729_61357732
H1_mix_00014126	chr11	-	3843	10	FSM	ENSG00000149532.16	ENST00000340437.8	3695	10	20	-168	20	168	multi-exon	TRUE	canonical	3	8	junction_9	148.68144752963	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCCCTTAAGGTTTAGCT	122	False	NA	NA	False	NA	NA	NA	61429891	61402472	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61404705_61410937_61411106_61411768_61411938_61415665_61415785_61416104_61416520_61419921_61420095_61420469_61420574_61421389_61421609_61429181_61429291_61429756
H1_mix_00014128	chr11	-	3512	10	FSM	ENSG00000149532.16	ENST00000439958.8	3487	10	-25	0	-8	0	multi-exon	FALSE	canonical	3	228	junction_5	68.9112866814919	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTATACTGCATTGTAT	13	False	NA	-19	True	AATAAA	-18	NA	61430000	61402728	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61404705_61410937_61411106_61411768_61411938_61415665_61415785_61416104_61416520_61419948_61420095_61420469_61420574_61421389_61421609_61429181_61429291_61429913
H1_mix_00014129	chr11	-	1234	10	FSM	ENSG00000149532.16	ENST00000477890.6	1234	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	135.624299508915	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCCAAGAAAGGAACCGGG	-5	True	NA	NA	False	AATGAA	-18	NA	61429968	61411006	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61411106_61411768_61411938_61415665_61415785_61416104_61416163_61416363_61416520_61419948_61420095_61420469_61420574_61421389_61421609_61429181_61429291_61429913
H1_mix_00014133	chr11	-	1264	1	FSM	ENSG00000279632.1	ENST00000623917.1	878	1	-79	-307	-79	307	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTATTCCCTGATCTCTT	2609	False	NA	NA	False	NA	NA	NA	61427404	61426140	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61426100_61427400
H1_mix_00014134	chr11	-	4854	9	FSM	ENSG00000011347.10	ENST00000263846.8	4854	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	12.2576506721313	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCCTTGGCTGTTTCCTCC	7245	False	NA	0	True	AATAAA	-17	NA	61581148	61515312	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61518732_61523074_61523275_61523826_61523942_61524362_61524533_61527914_61528186_61532988_61533125_61551383_61551464_61556103_61556208_61580789
H1_mix_00014136	chr11	-	6795	11	FSM	ENSG00000011347.10	ENST00000535826.5	1621	11	-305	-4869	-29	-44	multi-exon	FALSE	canonical	3	16	junction_7	17.5715679436981	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACGCCCAGGTGTGCTAA	7216	False	NA	NA	False	NA	NA	NA	61581177	61513757	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61518732_61523074_61523275_61523826_61523942_61524362_61524533_61527914_61528186_61532988_61533125_61546030_61546256_61547176_61547309_61551383_61551464_61556103_61556208_61580789
H1_mix_00014138	chr11	-	578	4	FSM	ENSG00000134825.16	ENST00000537328.6	578	4	0	0	0	0	multi-exon	FALSE	canonical	3	5669	junction_3	1366.53194457925	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGTCTGGGCCTACCCTT	1	True	NA	NA	False	NA	NA	NA	61792599	61788948	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61789236_61789784_61789922_61790492_61790603_61792555
H1_mix_00014139	chr11	-	517	4	FSM	ENSG00000134825.16	ENST00000541893.5	517	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	3267.30840635258	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTCTGGGGCCCATTC	9646	False	NA	-8	True	AATAAA	-16	NA	61792580	61789129	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61789236_61789784_61789991_61790422_61790603_61792555
H1_mix_00014140	chr11	-	579	4	FSM	ENSG00000134825.16	ENST00000545210.5	579	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	3252.30342304582	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTCTGGGGCCCATTC	6	True	NA	-8	True	AATAAA	-16	NA	61792594	61789129	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61789236_61789784_61789991_61790374_61790603_61792555
H1_mix_00014141	chr11	-	468	4	FSM	ENSG00000134825.16	ENST00000257262.12	468	4	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	3593.99446608119	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTCTGGGGCCCATTC	-1	True	NA	-8	True	AATAAA	-16	NA	61792601	61789129	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61789236_61789715_61789922_61790492_61790603_61792555
H1_mix_00014142	chr11	-	1693	4	FSM	ENSG00000134825.16	ENST00000543510.1	1692	4	0	-1	0	0	multi-exon	FALSE	canonical	3	9	junction_3	3974.26507531756	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTCTGGGGCCCATTC	9424	False	NA	-8	True	AATAAA	-16	NA	61792802	61789129	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61789236_61789784_61789922_61790492_61790603_61791462
H1_mix_00014144	chr11	-	4378	12	FSM	ENSG00000149485.19	ENST00000350997.12	4364	12	0	-14	0	14	multi-exon	FALSE	canonical	3	947	junction_4	63.1223395642629	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGATGTTCATCTGTGT	-7	True	NA	-3	True	AATAAA	-32	NA	61817003	61799612	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61802463_61802800_61802927_61803031_61803112_61803362_61803460_61803669_61803768_61804684_61804762_61806663_61806725_61810750_61810880_61810973_61811076_61812470_61812669_61813242_61813354_61816554
H1_mix_00014147	chr11	-	1798	12	FSM	ENSG00000221968.9	ENST00000278829.7	1790	12	0	-8	0	1	multi-exon	FALSE	canonical	3	325	junction_4	50.6217540536781	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTGGTGAATTTGCATG	9	True	NA	-3	True	ATTAAA	-24	NA	61891545	61873517	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61873866_61875850_61875977_61876110_61876191_61876358_61876456_61876865_61876964_61877510_61877588_61878154_61878216_61878511_61878635_61878745_61878848_61879311_61879510_61880040_61880152_61891168
H1_mix_00014150	chr11	-	262	1	FSM	ENSG00000277892.1	ENST00000620971.1	63	1	-233	34	-233	-34	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGTCTCCAGCCGCC	2034	False	NA	NA	False	NA	NA	NA	61878511	61878249	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61878200_61878500
H1_mix_00014151	chr11	-	549	2	FSM	ENSG00000221968.9	ENST00000529525.1	530	2	0	-19	0	19	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCACCCCATGAAGCTGAG	6122	False	NA	NA	False	AAGAAA	-16	NA	61891507	61890193	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61890404_61891168
H1_mix_00014152	chr11	-	2325	10	FSM	ENSG00000167994.13	ENST00000394836.7	2325	10	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_5	6.16441400296898	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGGGTGGCCACGCGC	-26	True	NA	-5	True	AATAAA	-18	NA	61917566	61897300	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61898361_61899313_61899381_61902441_61902542_61904545_61904659_61904753_61904883_61906465_61906685_61907392_61907471_61907564_61907661_61908053_61908307_61917356
H1_mix_00014155	chr11	-	805	4	FSM	ENSG00000167996.16	ENST00000526640.5	786	4	0	-19	0	0	multi-exon	FALSE	canonical	2	368	junction_3	8743.61581701504	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTTGTCTTTGAGGTCT	5147	False	NA	-46	True	AATAAA	-15	NA	61967607	61964565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61964892_61964986_61965113_61965368_61965516_61967401
H1_mix_00014159	chr11	-	1026	6	FSM	ENSG00000124942.14	ENST00000257247.11	1024	6	0	-2	0	-2	multi-exon	FALSE	canonical	2	9	junction_1	2.68328157299975	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTTGTGTCAACCTTTG	8	True	NA	-3	True	AATAAA	-16	NA	62546796	62433543	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62433892_62491731_62491832_62535002_62535191_62535944_62536099_62536468_62536568_62546659
H1_mix_00014160	chr11	-	18761	5	FSM	ENSG00000124942.14	ENST00000378024.9	18761	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5.76085931090146	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGTGCCTTTGCATTC	-2	True	NA	-1	True	AATAAA	-19	NA	62546806	62515901	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62534075_62535002_62535191_62535944_62536099_62536468_62536568_62546659
H1_mix_00014161	chr11	-	2503	9	FSM	ENSG00000254772.10	ENST00000525340.5	2496	9	0	-7	0	0	multi-exon	FALSE	canonical	3	9830	junction_8	610.951703799081	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTCCTGCCTCCTTTGT	28	True	NA	-4	True	ATTAAA	-23	NA	62573860	62559595	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62559838_62560068_62560194_62560281_62560455_62566805_62567011_62567398_62567529_62570964_62571109_62571539_62571683_62571837_62571902_62572583
H1_mix_00014162	chr11	-	1455	10	FSM	ENSG00000254772.10	ENST00000329251.5	1446	10	0	-9	0	9	multi-exon	FALSE	canonical	3	6330	junction_9	1461.30642547544	4585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCTTTGTGAGTGGTGG	-3	True	NA	5	True	ATTAAA	-32	NA	62573891	62559586	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62559838_62560068_62560194_62560281_62560455_62566805_62567011_62567398_62567529_62570964_62571109_62571539_62571683_62571837_62571902_62572583_62572743_62573830
H1_mix_00014163	chr11	-	5071	17	FSM	ENSG00000255508.7	ENST00000496634.2	5064	17	0	-7	0	7	multi-exon	FALSE	canonical	2	5	junction_9	5213.09309537953	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTCCTGCCTCCTTTGT	9724	False	62591545	-4	True	ATTAAA	-23	NA	62591531	62559595	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62559838_62560068_62560194_62560281_62560455_62566805_62567011_62567398_62567529_62570964_62571109_62571539_62571683_62571837_62571902_62572583_62574909_62576656_62576750_62576906_62577018_62577181_62577292_62578560_62579031_62581105_62581207_62581385_62581702_62589030_62589222_62591403
H1_mix_00014165	chr11	-	2826	9	FSM	ENSG00000149016.16	ENST00000308436.11	2826	9	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	46.3087464740733	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTTTCCTTTCATTTCC	10036	False	NA	NA	False	AATAAA	-24	NA	62591637	62575044	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62576245_62576656_62576750_62576906_62577018_62577181_62577292_62578560_62579031_62581105_62581207_62581385_62581702_62589030_62589222_62591403
H1_mix_00014166	chr11	-	2049	2	FSM	ENSG00000149016.16	ENST00000469480.1	2036	2	0	-13	0	0	multi-exon	FALSE	canonical	3	299	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTTTCCTTTCATTTCC	10	True	NA	NA	False	AATAAA	-24	NA	62577257	62575044	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62577018_62577181
H1_mix_00014169	chr11	-	6366	38	Fusion	ENSG00000149480.7_ENSG00000149499.12	novel	3266	22	NA	NA	0	5	multi-exon	FALSE	canonical	3	72	junction_37	27.2053039129032	1265	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGCTCAGCTGTTCTTT	6280	False	NA	-9	True	AATAAA	-21	NA	62611596	62593208	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr11_-_62594041_62594258_62594408_62594515_62594635_62594980_62595071_62595263_62595493_62595751_62595892_62596009_62596108_62596278_62596338_62596457_62596533_62596636_62596826_62597315_62597416_62597609_62597713_62598023_62598142_62598326_62598391_62598521_62598640_62600165_62600260_62600621_62600690_62601422_62602679_62602758_62602890_62603148_62603248_62603728_62603817_62603943_62604042_62604112_62604202_62605112_62605181_62605641_62605774_62605854_62605981_62606062_62606215_62606957_62607100_62607665_62607822_62608200_62608297_62608541_62608653_62608735_62608806_62608961_62609133_62609353_62609478_62609628_62609697_62610878_62610993_62611086_62611345_62611424
H1_mix_00014172	chr11	-	3266	22	FSM	ENSG00000149499.12	ENST00000394773.7	3266	22	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_20	23.2648167987687	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCGGTGCTTTTGTGGGG	-15	True	NA	-2	True	AATAAA	-17	NA	62612775	62602217	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62602679_62602758_62602890_62603148_62603248_62603728_62603817_62603943_62604042_62604112_62604202_62605112_62605181_62605641_62605774_62605854_62605981_62606062_62606215_62606957_62607100_62607665_62607822_62608200_62608297_62608541_62608653_62608735_62608806_62608961_62609133_62609353_62609478_62609628_62609697_62610878_62610993_62611086_62611345_62611424_62611597_62612435
H1_mix_00014176	chr11	-	1458	5	FSM	ENSG00000149541.10	ENST00000265471.10	1452	5	0	-6	0	6	multi-exon	FALSE	canonical	3	146	junction_4	46.1112784468182	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTTTTCCTTTGCTTCT	-1	True	NA	-21	True	AATAAA	-22	NA	62621986	62615289	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62615800_62616505_62616797_62616986_62617348_62620496_62620672_62621865
H1_mix_00014178	chr11	-	3841	24	FSM	ENSG00000089597.18	ENST00000356638.8	3835	24	0	-6	0	3	multi-exon	FALSE	canonical	0	0	junction_18	265.873457968587	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTAGTCTGGATTCTAGT	-4	True	NA	83	True	AATAAA	-22	NA	62646613	62624822	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62625925_62626064_62626166_62626334_62626448_62626570_62626685_62626859_62626935_62627047_62627125_62627288_62627354_62628768_62629013_62629193_62629296_62629587_62629685_62629813_62629958_62630196_62630277_62630378_62630506_62630600_62630837_62631029_62631184_62632564_62632746_62633004_62633102_62633183_62633272_62633444_62633515_62634820_62635001_62638982_62639111_62639358_62639468_62639626_62639732_62646561
H1_mix_00014179	chr11	-	3909	25	FSM	ENSG00000089597.18	ENST00000346178.8	3906	25	0	-3	0	3	multi-exon	FALSE	canonical	0	0	junction_18	354.82160766206	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTAGTCTGGATTCTAGT	-6	True	NA	83	True	AATAAA	-22	NA	62646615	62624822	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62625925_62626064_62626166_62626334_62626448_62626570_62626685_62626859_62626935_62627047_62627125_62627288_62627354_62628768_62629013_62629193_62629296_62629587_62629685_62629813_62629958_62630196_62630277_62630378_62630506_62630600_62630837_62631029_62631184_62632564_62632746_62633004_62633102_62633183_62633272_62633444_62633515_62634309_62634376_62634820_62635001_62638982_62639111_62639358_62639468_62639626_62639732_62646561
H1_mix_00014180	chr11	-	3845	23	FSM	ENSG00000089597.18	ENST00000540933.5	3836	23	0	-9	0	3	multi-exon	FALSE	canonical	0	0	junction_18	343.89670573426	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTAGTCTGGATTCTAGT	6574	False	NA	83	True	AATAAA	-22	NA	62646726	62624822	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62625925_62626064_62626166_62626334_62626448_62626570_62626685_62626859_62626935_62627047_62627125_62627288_62627354_62628768_62629013_62629193_62629296_62629587_62629685_62629813_62629958_62630196_62630277_62630378_62630506_62630600_62630837_62631029_62631184_62632564_62632746_62633004_62633102_62633183_62633272_62633444_62633515_62634820_62635001_62638982_62639111_62639626_62639732_62646561
H1_mix_00014185	chr11	-	3294	2	FSM	ENSG00000185085.2	ENST00000330574.2	3285	2	0	-9	0	9	multi-exon	FALSE	canonical	3	120	junction_1	0	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTCATGCTGAGAGCGT	-2	True	NA	8	True	AATAAA	-32	NA	62653302	62646838	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62650000_62653169
H1_mix_00014187	chr11	-	775	3	FSM	ENSG00000278615.5	ENST00000532786.2	774	3	0	-1	0	1	multi-exon	FALSE	canonical	3	2503	junction_2	16.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTGTGATTAAATGTAG	22	True	NA	0	True	AATAAA	-17	NA	62665181	62662815	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62663160_62663235_62663334_62664848
H1_mix_00014188	chr11	-	647	4	FSM	ENSG00000278615.5	ENST00000524958.6	646	4	0	-1	0	1	multi-exon	FALSE	canonical	3	2187	junction_3	157.319914682012	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTGTGATTAAATGTAG	-7	True	NA	0	True	AATAAA	-17	NA	62665210	62662815	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62663160_62663235_62663334_62664848_62664974_62665130
H1_mix_00014189	chr11	-	2916	5	FSM	ENSG00000162194.13	ENST00000431002.6	2915	5	0	-1	0	0	multi-exon	FALSE	canonical	3	25	junction_3	1246.55505293589	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTGTGATTAAATGTA	2	True	NA	-1	True	AATAAA	-16	NA	62671765	62662816	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62663160_62663235_62663334_62664848_62664974_62667522_62667748_62669640
H1_mix_00014191	chr11	-	1274	8	FSM	ENSG00000162191.14	ENST00000525717.5	1257	8	0	-17	0	0	multi-exon	FALSE	canonical	3	914	junction_4	79.6697264092356	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCTGACTCCTTCCTGA	10	True	NA	-3	True	AATAAA	-19	NA	62679067	62676499	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62676640_62676812_62677006_62677517_62677833_62677926_62678119_62678338_62678409_62678494_62678602_62678689_62678744_62678864
H1_mix_00014192	chr11	-	1291	8	FSM	ENSG00000162191.14	ENST00000294119.6	1291	8	0	0	0	0	multi-exon	FALSE	canonical	3	914	junction_4	80.8520947439817	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGACTCCTTCCTGAAT	22	True	NA	-1	True	AATAAA	-21	NA	62679055	62676497	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62677006_62677517_62677635_62677780_62677833_62677926_62678119_62678338_62678409_62678494_62678602_62678689_62678744_62678864
H1_mix_00014193	chr11	-	1135	9	FSM	ENSG00000162191.14	ENST00000301935.10	1134	9	0	-1	0	0	multi-exon	FALSE	canonical	3	914	junction_5	75.7392731678883	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTGACTCCTTCCTGAA	4	True	NA	-2	True	AATAAA	-20	NA	62679073	62676498	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62676640_62676812_62677006_62677517_62677635_62677780_62677833_62677926_62678119_62678338_62678409_62678494_62678602_62678689_62678744_62678864
H1_mix_00014194	chr11	-	943	10	FSM	ENSG00000162191.14	ENST00000534176.1	943	10	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_9	299.570227138236	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCCAAGAAATGTCCCAGC	-4	True	NA	-116	True	NA	NA	NA	62679081	62676612	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62676640_62676812_62677006_62677517_62677635_62677780_62677833_62677926_62678119_62678338_62678409_62678494_62678602_62678689_62678744_62678864_62678953_62679038
H1_mix_00014196	chr11	-	1710	11	FSM	ENSG00000168000.16	ENST00000360796.10	1710	11	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_10	80.6074438249967	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTGACTCTGAAATGGG	-2	True	NA	-37	True	AATAAA	-19	NA	62707424	62690274	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62707108
H1_mix_00014197	chr11	-	2001	12	FSM	ENSG00000168000.16	ENST00000679883.1	2001	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_11	134.087056955454	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTGACTCTGAAATGGG	-13	True	NA	-37	True	AATAAA	-19	NA	62709537	62690274	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62707108_62707325_62709146
H1_mix_00014198	chr11	-	1712	11	FSM	ENSG00000168000.16	ENST00000403550.5	1693	11	0	-19	0	0	multi-exon	FALSE	canonical	3	34	junction_10	120.164262574195	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTTGACTCTGAAATGG	34	True	NA	-38	True	AATAAA	-18	NA	62706234	62690275	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62705915
H1_mix_00014199	chr11	-	1365	10	FSM	ENSG00000168000.16	ENST00000278893.11	1364	10	0	-1	0	0	multi-exon	FALSE	canonical	3	38	junction_4	133.383416519705	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTGACTCTGAAATGGG	-3	True	NA	-37	True	AATAAA	-19	NA	62706315	62690274	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62706202
H1_mix_00014200	chr11	-	1535	11	FSM	ENSG00000168000.16	ENST00000407022.7	1516	11	0	-19	0	0	multi-exon	FALSE	canonical	3	217	junction_10	67.7389105315401	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTTGACTCTGAAATGG	8787	False	NA	-38	True	AATAAA	-18	NA	62706344	62690275	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62706202
H1_mix_00014201	chr11	-	1958	9	FSM	ENSG00000168000.16	ENST00000682794.1	1954	9	0	-4	0	0	multi-exon	FALSE	canonical	1	1	junction_7	155.739967574159	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCGTTTTTCCTTCAATA	-1	True	NA	-77	True	NA	NA	NA	62707587	62690314	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62690522_62690611_62690693_62690786_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62705300_62705618_62707108
H1_mix_00014203	chr11	-	2169	8	FSM	ENSG00000168000.16	ENST00000682644.1	2166	8	0	-3	0	0	multi-exon	FALSE	canonical	3	171	junction_7	90.9186673991247	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGGGGTGCTCTCCGA	-1	True	NA	NA	False	NA	NA	NA	62707587	62690413	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62690693_62690786_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62707108
H1_mix_00014206	chr11	-	5214	14	FSM	ENSG00000214753.4	ENST00000301785.7	5214	14	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	10.6231855394659	340	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTATCTCCTGTGGCTGCA	-6	True	NA	-5	True	AATAAA	-22	NA	62727457	62712629	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62715380_62715499_62715608_62715863_62715938_62716988_62717190_62720022_62720192_62721294_62721424_62721819_62721943_62722116_62722381_62722600_62722714_62722812_62722904_62723586_62723727_62723913_62723991_62724290_62724427_62726618
H1_mix_00014208	chr11	-	2973	2	FSM	ENSG00000185670.9	ENST00000673933.1	2972	2	0	-1	0	-1	multi-exon	FALSE	canonical	3	22	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGTGTTGGCTGGTTTCT	3916	False	NA	-6	True	CATAAA	-26	NA	62754184	62750963	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62753716_62753963
H1_mix_00014209	chr11	-	3024	2	NNC	ENSG00000185670.9	novel	2950	2	NA	NA	-3973	-1	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	0	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGTGTTGGCTGGTTTCT	NA	False	NA	-6	True	CATAAA	-26	NA	62758157	62750963	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_62753716_62757885
H1_mix_00014210	chr11	-	3306	3	NNC	ENSG00000185670.9	novel	2950	2	NA	NA	-3973	-1	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	2.5	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGTGTTGGCTGGTTTCT	NA	False	NA	-6	True	CATAAA	-26	NA	62758157	62750963	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_62753716_62754237_62754520_62757885
H1_mix_00014211	chr11	-	504	1	FSM	ENSG00000267811.1	ENST00000596071.1	487	1	0	-17	0	17	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGTTTGCTCGCGAGTT	NA	False	NA	16	True	AATAAA	-32	NA	62771606	62771102	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62771100_62771600
H1_mix_00014213	chr11	-	736	2	FSM	ENSG00000168569.8	ENST00000525631.1	736	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCCGCCACGGCCCCGCA	5	True	NA	NA	False	NA	NA	NA	62791997	62787508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62787926_62791678
H1_mix_00014216	chr11	-	4128	20	FSM	ENSG00000162231.14	ENST00000531709.6	4128	20	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_15	19.0966342700281	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCGTGCTGGATTGGTT	414	False	NA	-3	True	TATAAA	-21	NA	62805470	62792122	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62792515_62792640_62792702_62794257_62794441_62794934_62795008_62795900_62795944_62796065_62796182_62796286_62796346_62796459_62796568_62797182_62797239_62797317_62797387_62798538_62800487_62801093_62801202_62801328_62801418_62801561_62801632_62801738_62801820_62801941_62802047_62802176_62802261_62803418_62803573_62803791_62803979_62805328
H1_mix_00014218	chr11	-	1762	11	FSM	ENSG00000162236.13	ENST00000294179.8	1794	11	0	32	0	5	multi-exon	FALSE	canonical	3	183	junction_1	15.5692003648229	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTCATCATTTCTGGGTG	7	True	NA	3	True	NA	NA	NA	62832051	62806891	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62807629_62824165_62824288_62824458_62824566_62825035_62825118_62825282_62825340_62825422_62825540_62827154_62827226_62827342_62827399_62827560_62827632_62831018_62831263_62831953
H1_mix_00014219	chr11	-	544	1	FSM	ENSG00000283268.1	ENST00000636508.1	485	1	-107	48	-107	-48	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTCAGTCCGCCCCAAC	8899	False	NA	NA	False	NA	NA	NA	62832910	62832366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62832400_62832900
H1_mix_00014220	chr11	-	1219	11	FSM	ENSG00000133316.16	ENST00000278856.9	1219	11	0	0	0	0	multi-exon	FALSE	canonical	3	508	junction_6	26.1543495426669	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGACCCTGAGCCTTTTG	-4	True	NA	-6	True	AATAAA	-15	NA	62839590	62832910	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62833132_62833617_62833675_62833791_62833938_62834275_62834332_62834426_62834528_62835430_62835533_62835694_62835842_62835960_62836037_62839113_62839236_62839321_62839429_62839506
H1_mix_00014225	chr11	-	1163	1	FSM	ENSG00000255717.8	ENST00000668048.1	1158	1	0	-5	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTACTTTTTTTGTGTGTA	2735	False	NA	-18	True	AATAAA	-21	NA	62853145	62851982	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62852000_62853100
H1_mix_00014226	chr11	-	1117	8	FSM	ENSG00000255717.8	ENST00000670323.1	1112	8	0	-5	0	1	multi-exon	FALSE	canonical	3	179	junction_7	18.6153327191565	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTACTTTTTTTGTGTGTA	797	False	NA	-18	True	AATAAA	-21	NA	62855083	62851982	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887
H1_mix_00014227	chr11	-	1207	9	FSM	ENSG00000255717.8	ENST00000663967.1	1202	9	0	-5	0	1	multi-exon	FALSE	canonical	3	151	junction_8	23.4677305038216	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTACTTTTTTTGTGTGTA	513	False	NA	-18	True	AATAAA	-21	NA	62855367	62851982	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132
H1_mix_00014228	chr11	-	1046	9	ISM	ENSG00000255717.8	ENST00000537869.6	1069	10	425	-4	0	1	3prime_fragment	FALSE	canonical	3	36	junction_5	57.7666372138798	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTACTTTTTTTGTGTGTA	420	False	NA	-18	True	AATAAA	-21	NA	62855460	62851982	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854518_62854552_62854887_62854939_62855132_62855217_62855423
H1_mix_00014229	chr11	-	902	11	FSM	ENSG00000255717.8	ENST00000541578.6	897	11	0	-5	0	1	multi-exon	FALSE	canonical	3	18	junction_1	56.6428283192144	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTACTTTTTTTGTGTGTA	392	False	NA	-18	True	AATAAA	-21	NA	62855488	62851982	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62852437_62852655_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423
H1_mix_00014230	chr11	-	2779	6	FSM	ENSG00000255717.8	ENST00000670729.1	2763	6	0	-16	0	1	multi-exon	FALSE	canonical	3	148	junction_5	29.0544316757358	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTACTTTTTTTGTGTGTA	43	False	NA	-18	True	AATAAA	-21	NA	62855837	62851982	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62852682_62852810_62853591_62853800_62854552_62854887_62854939_62855132_62855217_62855423
H1_mix_00014231	chr11	-	1705	9	FSM	ENSG00000255717.8	ENST00000544550.6	1689	9	0	-16	0	1	multi-exon	FALSE	canonical	3	148	junction_8	23.3073888498905	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTACTTTTTTTGTGTGTA	43	False	NA	-18	True	AATAAA	-21	NA	62855837	62851982	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62852682_62852810_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423
H1_mix_00014232	chr11	-	1518	10	FSM	ENSG00000255717.8	ENST00000658540.1	1513	10	0	-5	0	1	multi-exon	FALSE	canonical	3	148	junction_9	26.1958436058513	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTACTTTTTTTGTGTGTA	-5	True	NA	-18	True	AATAAA	-21	NA	62855885	62851982	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423
H1_mix_00014235	chr11	-	1456	10	FSM	ENSG00000255717.8	ENST00000653690.1	1438	10	0	-18	0	1	multi-exon	FALSE	canonical	3	84	junction_9	41.9588275560286	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTACTTTTTTTGTGTGTA	-5	True	NA	-18	True	AATAAA	-21	NA	62855885	62851982	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854939_62855132_62855217_62855423_62855467_62855864
H1_mix_00014237	chr11	-	1121	11	FSM	ENSG00000255717.8	ENST00000689147.1	1162	11	36	5	0	1	multi-exon	FALSE	canonical	3	84	junction_10	39.8096721915667	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTACTTTTTTTGTGTGTA	-6	True	NA	-18	True	AATAAA	-21	NA	62855886	62851982	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423_62855467_62855864
H1_mix_00014238	chr11	-	1800	9	FSM	ENSG00000255717.8	ENST00000667655.1	1782	9	0	-18	0	1	multi-exon	FALSE	canonical	3	84	junction_8	44.4576694733316	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTACTTTTTTTGTGTGTA	NA	False	NA	-18	True	AATAAA	-21	NA	62855927	62851982	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62854552_62854887_62854939_62855132_62855217_62855423_62855467_62855864
H1_mix_00014239	chr11	-	955	7	FSM	ENSG00000255717.8	ENST00000539975.5	955	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	78.3569113451746	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGATGAAAATAATAAAATG	644	False	NA	-55	True	NA	NA	NA	62855236	62852019	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62855132
H1_mix_00014240	chr11	-	1768	9	FSM	ENSG00000255717.8	ENST00000670502.1	1752	9	0	-16	0	0	multi-exon	FALSE	canonical	3	84	junction_8	42.8485705712571	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGATGAAAATAATAAAATG	NA	False	NA	-55	True	NA	NA	NA	62855906	62852019	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853834_62854017_62854552_62854887_62854939_62855132_62855217_62855423_62855467_62855864
H1_mix_00014242	chr11	-	754	8	FSM	ENSG00000255717.8	ENST00000545440.5	754	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_5	77.3552631350568	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTACTGACCTAGCTTG	392	False	NA	NA	False	NA	NA	NA	62855488	62852251	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854518_62854552_62855132_62855217_62855423
H1_mix_00014246	chr11	-	3106	6	FSM	ENSG00000168004.10	ENST00000540857.6	3042	6	-64	0	-37	0	multi-exon	FALSE	canonical	3	39	junction_5	15.6792856980157	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTTATTTTTCACTT	548	False	NA	-2	True	ATTAAA	-16	NA	63491231	63461403	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_63463596_63466109_63466373_63468356_63468466_63488870_63488977_63490242_63490334_63490886
H1_mix_00014247	chr11	-	2844	6	FSM	ENSG00000168004.10	ENST00000301790.4	1166	6	255	-1933	0	0	multi-exon	FALSE	canonical	2	14	junction_5	23.0182536261985	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTTATTTTTCACTT	15	True	NA	-2	True	ATTAAA	-16	NA	63490939	63461403	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_63463596_63466109_63466373_63468356_63468466_63488870_63488977_63490242_63490364_63490886
H1_mix_00014250	chr11	-	797	6	NNC	ENSG00000176485.13	novel	1075	5	NA	NA	0	79637	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	483.197268204198	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGAATGTTTTCTGAATT	2	True	NA	NA	False	AAAAAG	-8	NA	63614433	63493557	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_63493593_63574774_63575047_63590099_63590369_63598060_63598164_63613999_63614069_63614384
H1_mix_00014252	chr11	-	6224	4	FSM	ENSG00000176485.13	ENST00000323646.9	2594	4	-171	-3459	-107	3459	multi-exon	FALSE	canonical	3	1040	junction_3	71.2569684701472	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATTTTCATGGGTCATG	3	True	NA	-20	True	AATAAA	-30	NA	63614540	63569735	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_63575047_63590099_63590369_63598060_63598164_63613999
H1_mix_00014253	chr11	-	10307	14	NNC	ENSG00000184743.13	novel	6899	13	NA	NA	111	54351	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	42.3799383151702	36	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATTTTCATGGGTCATG	4	True	NA	-20	True	AATAAA	-30	NA	63671635	63569735	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_63572886_63624087_63629406_63631039_63631472_63633025_63633098_63635533_63635591_63636206_63636335_63643356_63643496_63644168_63644262_63646506_63646564_63651935_63651987_63652470_63652576_63658760_63658905_63659037_63659253_63671289
H1_mix_00014254	chr11	-	2794	5	FSM	ENSG00000176485.13	ENST00000415826.3	1075	5	0	-1719	0	452	multi-exon	FALSE	canonical	3	377	junction_4	335.109310524193	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAATTTTTGACTGATT	2	True	NA	NA	False	AATATA	-32	NA	63614433	63572742	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_63575047_63590099_63590369_63598060_63598164_63613999_63614069_63614384
H1_mix_00014256	chr11	-	5750	4	NIC	ENSG00000188070.9	novel	5716	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	14	junction_3	1.63299316185545	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTGTGTTTTTTTTTTT	588	False	NA	-2	True	AATAAA	-25	NA	63768641	63759891	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_63764599_63764867_63765255_63765806_63766305_63768483
H1_mix_00014257	chr11	-	5712	5	FSM	ENSG00000188070.9	ENST00000433688.2	5716	5	0	4	0	-4	multi-exon	FALSE	canonical	3	14	junction_4	4.55521678957215	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATTGTTTGTGTTTTTTT	7	True	NA	-6	True	AATAAA	-21	NA	63768775	63759895	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_63763870_63764037_63764599_63764867_63765255_63765806_63766305_63768483
H1_mix_00014258	chr11	-	4756	3	NIC	ENSG00000188070.9	novel	5716	5	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	3	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTGTGTTTTTTTTTTT	19	True	NA	-2	True	AATAAA	-25	NA	63768763	63759891	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_63763870_63765806_63766305_63768483
H1_mix_00014260	chr11	-	1615	3	FSM	ENSG00000167771.6	ENST00000489217.1	792	3	-156	-667	-156	9	multi-exon	FALSE	canonical	3	346	junction_1	23.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTCTTTCCCTTTTGGTG	4123	False	NA	-5	True	AATAAA	-16	NA	63913112	63911220	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_63912535_63912675_63912734_63912869
H1_mix_00014261	chr11	-	3920	12	FSM	ENSG00000167771.6	ENST00000301459.5	2915	12	0	-1005	0	1005	multi-exon	FALSE	canonical	3	346	junction_2	15.2440206405415	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGAGAGGAAGGGCGAGGG	-3	True	NA	NA	False	AATGAA	-12	NA	63917164	63910224	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_63912180_63912304_63912535_63912675_63912734_63912869_63912948_63913953_63914170_63914260_63914331_63914416_63914542_63914654_63914817_63914901_63914955_63915177_63915259_63915554_63915612_63916329
H1_mix_00014262	chr11	-	1227	12	NNC	ENSG00000133315.12	novel	1257	11	NA	NA	0	21574	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	66.4308501468984	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAGATTCTGCAAAGTCC	68	False	NA	NA	False	NA	NA	NA	64166057	63976983	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_63977010_63998557_63998688_63998837_63998873_63998954_63999037_63999330_63999405_63999529_63999561_63999641_63999764_64000226_64000344_64015251_64015282_64151238_64151356_64152291_64152394_64165696
H1_mix_00014263	chr11	-	1257	11	FSM	ENSG00000133315.12	ENST00000255681.7	1257	11	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_7	23.4486673395313	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTACTGTCTGAGCTCT	12	True	NA	-8	True	AATAAA	-16	NA	64166113	63998557	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_63998688_63998837_63998873_63998954_63999037_63999330_63999405_63999529_63999561_63999641_63999764_64000226_64000344_64015251_64015282_64151238_64151356_64152291_64152394_64165696
H1_mix_00014264	chr11	-	431	3	FSM	ENSG00000133315.12	ENST00000542105.5	431	3	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_1	16	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCCTACTGTCTGAGCT	NA	False	NA	-10	True	AATAAA	-14	NA	63999222	63998559	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_63998688_63998837_63998873_63998954
H1_mix_00014267	chr11	-	1083	4	FSM	ENSG00000133315.12	ENST00000538595.1	868	4	-49	-166	0	166	multi-exon	FALSE	canonical	3	11	junction_1	108.788275512065	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGAGCCACCACAATAAGCC	19	True	NA	NA	False	NA	NA	NA	64166106	64148580	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64149035_64151238_64151356_64152291_64152394_64165696
H1_mix_00014268	chr11	-	865	7	FSM	ENSG00000149743.14	ENST00000394547.7	865	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	104.007611900925	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACATCTGGTCTTCCTTG	23	True	NA	1	True	AAAAAG	-45	NA	64226150	64223798	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64223968_64224099_64224211_64224284_64224342_64224542_64224718_64224800_64224971_64225498_64225581_64226049
H1_mix_00014269	chr11	-	985	8	FSM	ENSG00000149743.14	ENST00000317459.11	968	8	0	-17	0	0	multi-exon	FALSE	canonical	0	0	junction_7	96.3497031968571	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACATCTGGTCTTCCTTG	-13	True	NA	1	True	AAAAAG	-45	NA	64226186	64223798	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64223968_64224099_64224211_64224284_64224342_64224542_64224718_64224800_64224971_64225498_64225581_64225785_64225870_64226049
H1_mix_00014270	chr11	-	1750	6	FSM	ENSG00000149743.14	ENST00000539436.5	1726	6	0	-24	0	-6	multi-exon	FALSE	canonical	0	0	junction_5	104.878977874501	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTAGCTACATCTGGTC	8150	False	NA	-6	True	AAAAAG	-38	NA	64226229	64223805	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64223968_64224099_64224211_64224284_64224718_64224800_64225581_64225785_64225870_64226049
H1_mix_00014271	chr11	-	886	6	FSM	ENSG00000149743.14	ENST00000546089.5	684	6	-179	-23	92	0	multi-exon	FALSE	canonical	1	3	junction_1	109.168860028856	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGTTTGAAACCATGTTTC	8330	False	NA	-30	True	TATAAA	-31	NA	64226049	64223829	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64223968_64224284_64224342_64224542_64224718_64224800_64224971_64225498_64225581_64225785
H1_mix_00014272	chr11	-	857	8	NIC	ENSG00000149743.14	novel	968	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_7	91.6225620551566	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTCGTTTGAAACCATGT	8146	False	NA	-33	True	AATAAA	-43	NA	64226233	64223832	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_64223968_64224099_64224211_64224284_64224342_64224542_64224718_64224800_64224971_64225498_64225581_64225785_64225870_64226190
H1_mix_00014273	chr11	-	989	4	FSM	ENSG00000173457.11	ENST00000309318.8	989	4	0	0	0	0	multi-exon	FALSE	canonical	3	4372	junction_1	91.0396738912339	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCTCGGCTGGTCTCTTT	-12	True	NA	-21	True	AATAAA	-28	NA	64246943	64244478	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64244823_64244929_64244963_64245203_64245288_64246415
H1_mix_00014276	chr11	-	1875	6	NIC	ENSG00000173457.11	novel	989	4	NA	NA	-1805	0	combination_of_known_splicesites	FALSE	canonical	3	53	junction_4	2159.29419950131	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGCTCGGCTGGTCTCTT	3824	False	NA	-22	True	AATAAA	-27	NA	64248748	64244479	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_64244823_64244929_64244963_64245203_64245288_64246415_64247360_64248049_64248173_64248400
H1_mix_00014278	chr11	-	853	4	FSM	ENSG00000257086.1	ENST00000545800.1	853	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	27.0102861065105	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAAAGCGCTTCGGCGGC	3078	False	NA	NA	False	NA	NA	NA	64249494	64246938	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64247360_64248049_64248173_64248400_64248599_64249383
H1_mix_00014280	chr11	-	966	4	FSM	ENSG00000002330.14	ENST00000309032.8	929	4	-39	2	0	-2	multi-exon	FALSE	canonical	3	284	junction_3	62.9655990733565	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGAGGCTTTTCTGTGCGTC	-14	True	NA	-5	True	AATAAA	-17	NA	64284704	64269831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64270338_64271612_64271804_64284181_64284377_64284630
H1_mix_00014281	chr11	-	1157	3	FSM	ENSG00000002330.14	ENST00000394532.7	1157	3	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_1	2.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTTTTCTGTGCGTCGA	477	False	NA	-3	True	AATAAA	-19	NA	64284639	64269829	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64270338_64271612_64271804_64284181
H1_mix_00014283	chr11	-	704	2	FSM	ENSG00000173113.7	ENST00000535126.1	704	2	0	0	0	0	multi-exon	FALSE	canonical	3	4411	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGTTTCTCTTTGCAGCAA	563	False	NA	-84	True	ATTAAA	-16	NA	64317510	64316690	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64317148_64317263
H1_mix_00014284	chr11	-	661	3	FSM	ENSG00000173113.7	ENST00000539854.1	659	3	0	-2	0	0	multi-exon	FALSE	canonical	3	4253	junction_2	79	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCGGTTTCTCTTTGCAG	-4	True	NA	-87	True	ATTAAA	-13	NA	64317553	64316693	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64317148_64317263_64317366_64317448
H1_mix_00014285	chr11	-	562	4	FSM	ENSG00000173113.7	ENST00000308774.6	561	4	0	-1	0	0	multi-exon	FALSE	canonical	3	68	junction_2	1975.4257487663	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCGGTTTCTCTTTGCAG	-9	True	NA	-87	True	ATTAAA	-13	NA	64317558	64316693	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64316969_64317057_64317133_64317263_64317366_64317448
H1_mix_00014287	chr11	-	520	3	FSM	ENSG00000236935.2	ENST00000447028.1	672	3	152	0	152	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTAGGCTTCTTCCT	NA	False	NA	2	True	AATAAA	-18	NA	64329352	64325049	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64325332_64327483_64327537_64329167
H1_mix_00014290	chr11	-	2221	17	FSM	ENSG00000068831.19	ENST00000377497.7	2221	17	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_9	62.6465469419504	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCAGCGCCTAGAATCCC	-1	True	NA	-2	True	AATAAA	-24	NA	64744834	64726910	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64727132_64727295_64727361_64728862_64729043_64729761_64729799_64730052_64730195_64735111_64735228_64735541_64735665_64735902_64735981_64736752_64737035_64739359_64739477_64739635_64739810_64740012_64740164_64740947_64741080_64741438_64741502_64742009_64742113_64742793_64742938_64744741
H1_mix_00014291	chr11	-	524	4	NNC	ENSG00000068831.19	novel	667	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	91.9649691760703	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGAGGGTCATGTTGCT	9557	False	NA	-2	True	AATAAA	-17	NA	64742937	64740865	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_64741080_64741438_64741504_64742011_64742113_64742793
H1_mix_00014292	chr11	-	2176	4	FSM	ENSG00000068831.19	ENST00000394430.5	2174	4	0	-2	0	0	multi-exon	FALSE	canonical	3	170	junction_3	21.013223349966	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGAGGGTCATGTTGCT	9066	False	NA	-2	True	AATAAA	-17	NA	64744589	64740865	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64741080_64741438_64741502_64742009_64742113_64742793
H1_mix_00014293	chr11	-	583	5	FSM	ENSG00000068831.19	ENST00000377489.5	583	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	87.505356978873	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGAGGGTCATGTTGCT	10	True	NA	-2	True	AATAAA	-17	NA	64745333	64740865	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64741080_64741438_64741502_64742009_64742113_64742793_64742938_64745274
H1_mix_00014295	chr11	-	2875	20	FSM	ENSG00000068976.14	ENST00000164139.4	2866	20	0	-9	0	0	multi-exon	FALSE	canonical	3	22	junction_7	5.6037185912447	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTCTTTGTTGGGAAATA	-3	True	NA	0	True	AATAAA	-26	NA	64759974	64746388	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64746809_64746920_64746988_64747223_64747359_64750375_64750584_64751324_64751467_64751596_64751656_64751923_64752072_64752402_64752505_64753072_64753188_64753518_64753683_64753878_64754026_64754252_64754346_64754692_64754837_64755272_64755356_64755446_64755559_64757778_64757911_64758245_64758350_64758436_64758516_64758602_64758705_64759655
H1_mix_00014296	chr11	-	2962	13	FSM	ENSG00000168066.21	ENST00000377387.5	2947	13	0	-15	0	15	multi-exon	FALSE	canonical	3	107	junction_12	268.954250549957	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTAATGCCTGCCCCG	641	False	NA	-7	True	AATAAA	-37	NA	64778469	64764590	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64765519_64766899_64767080_64767191_64767252_64767570_64767845_64768105_64768287_64769021_64769130_64769222_64769339_64769425_64769610_64769963_64770054_64770255_64770409_64773429_64773506_64776497_64776627_64777986
H1_mix_00014297	chr11	-	3651	13	FSM	ENSG00000168066.21	ENST00000681407.1	3631	13	0	-20	0	15	multi-exon	FALSE	canonical	3	107	junction_12	245.260901332076	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTAATGCCTGCCCCG	11	True	NA	-7	True	AATAAA	-37	NA	64778521	64764590	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64766156_64766899_64767080_64767191_64767252_64767570_64767845_64768105_64768287_64769021_64769130_64769222_64769339_64769425_64769610_64769963_64770054_64770255_64770409_64773429_64773506_64776497_64776627_64777986
H1_mix_00014298	chr11	-	3297	13	FSM	ENSG00000168066.21	ENST00000377390.8	3282	13	0	-15	0	15	multi-exon	FALSE	canonical	3	449	junction_1	144.805113284488	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTAATGCCTGCCCCG	-10	True	NA	-7	True	AATAAA	-37	NA	64778542	64764590	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64766156_64766899_64767080_64767191_64767252_64767570_64767845_64768105_64768287_64769021_64769130_64769222_64769339_64769425_64769610_64769963_64770054_64770255_64770409_64773429_64773506_64776497_64776627_64778361
H1_mix_00014299	chr11	-	2865	13	FSM	ENSG00000168066.21	ENST00000227503.13	2850	13	0	-15	0	15	multi-exon	FALSE	canonical	3	266	junction_1	187.292774375664	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTAATGCCTGCCCCG	363	False	NA	-7	True	AATAAA	-37	NA	64778747	64764590	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64765519_64766899_64767080_64767191_64767252_64767570_64767845_64768105_64768287_64769021_64769130_64769222_64769339_64769425_64769610_64769963_64770054_64770255_64770409_64773429_64773506_64776497_64776627_64778361
H1_mix_00014300	chr11	-	2869	13	FSM	ENSG00000168066.21	ENST00000377394.7	2854	13	0	-15	0	15	multi-exon	FALSE	canonical	3	72	junction_3	274.999128786499	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTAATGCCTGCCCCG	363	False	NA	-7	True	AATAAA	-37	NA	64778747	64764590	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64765519_64766899_64767080_64767191_64767252_64767566_64767845_64768105_64768287_64769021_64769130_64769222_64769339_64769425_64769610_64769963_64770054_64770255_64770409_64773429_64773506_64776497_64776627_64778361
H1_mix_00014302	chr11	-	3109	14	FSM	ENSG00000168066.21	ENST00000334944.9	3094	14	0	-15	0	15	multi-exon	FALSE	canonical	3	64	junction_1	246.524456580494	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTAATGCCTGCCCCG	324	False	NA	-7	True	AATAAA	-37	NA	64778786	64764590	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64765519_64765950_64766156_64766899_64767080_64767191_64767252_64767570_64767845_64768105_64768287_64769021_64769130_64769222_64769339_64769425_64769610_64769963_64770054_64770255_64770409_64773429_64773506_64776497_64776627_64778361
H1_mix_00014303	chr11	-	3482	13	NIC	ENSG00000168066.21	novel	3282	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	117	junction_3	240.290492598715	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTCTTTATTTTCTTT	363	False	NA	-22	True	AATAAA	-22	NA	64778747	64764605	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_64766156_64766899_64767080_64767191_64767247_64767570_64767845_64768105_64768287_64769021_64769130_64769222_64769339_64769425_64769610_64769963_64770054_64770255_64770409_64773429_64773506_64776497_64776627_64778361
H1_mix_00014309	chr11	-	2921	32	FSM	ENSG00000168067.12	ENST00000377350.7	2931	32	10	0	-4	0	multi-exon	FALSE	canonical	3	13	junction_14	19.6599075964602	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTCTGGTCCCTCTGGGT	7502	False	NA	-40	True	ATTAAA	-15	NA	64803231	64789136	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64789625_64789729_64789786_64789888_64789960_64790187_64790275_64790393_64790463_64791908_64792087_64792171_64792276_64792363_64792423_64796272_64796391_64796492_64796554_64796633_64796714_64796808_64796894_64796981_64797024_64797103_64797169_64797274_64797381_64797500_64797535_64797625_64797665_64798793_64798838_64799420_64799480_64799604_64799684_64800108_64800217_64800310_64800393_64800763_64800827_64800899_64801032_64801110_64801184_64801578_64801622_64801709_64801758_64802065_64802122_64802418_64802484_64802562_64802654_64802884_64802943_64803053
H1_mix_00014310	chr11	-	2695	9	FSM	ENSG00000133895.18	ENST00000377313.6	2691	9	0	-4	0	0	multi-exon	FALSE	canonical	3	21	junction_8	149.44851747341	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCAAGTCCATGTTTATCT	601	False	NA	-10	True	TATAAA	-1	NA	64810132	64803509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64804817_64805033_64805199_64805634_64805771_64806231_64806369_64807010_64807099_64807178_64807220_64807551_64807681_64807890_64808100_64809649
H1_mix_00014311	chr11	-	2964	10	FSM	ENSG00000133895.18	ENST00000315422.9	2960	10	0	-4	0	0	multi-exon	FALSE	canonical	3	190	junction_9	89.2499610955409	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCAAGTCCATGTTTATCT	3	True	NA	-10	True	TATAAA	-1	NA	64810551	64803509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64804817_64805033_64805199_64805634_64805771_64806231_64806369_64807010_64807099_64807178_64807220_64807551_64807681_64807890_64808100_64809664_64810133_64810267
H1_mix_00014312	chr11	-	2718	10	FSM	ENSG00000133895.18	ENST00000450708.7	2712	10	0	-6	0	0	multi-exon	FALSE	canonical	3	130	junction_9	107.646540946645	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCAAGTCCATGTTTATCT	3	True	NA	-10	True	TATAAA	-1	NA	64810551	64803509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64804817_64805033_64805199_64805634_64805771_64806231_64806369_64807010_64807099_64807178_64807220_64807551_64807681_64807890_64808100_64809664_64810133_64810513
H1_mix_00014315	chr11	-	2806	11	FSM	ENSG00000133895.18	ENST00000672304.1	2800	11	0	-6	0	0	multi-exon	FALSE	canonical	3	11	junction_4	201.349546808529	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATACATTTTGTTAAAAAAAA	3	True	NA	-36	True	AAGAAA	-6	NA	64810551	64803535	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64804817_64805033_64805199_64805634_64805771_64805887_64806014_64806231_64806369_64807010_64807099_64807178_64807220_64807551_64807681_64807890_64808100_64809664_64810133_64810525
H1_mix_00014317	chr11	-	6163	37	FSM	ENSG00000171219.9	ENST00000342711.6	6161	37	0	-2	0	2	multi-exon	FALSE	canonical	3	10	junction_30	7.38429263895857	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCTCCTTGCCTGGATC	10	True	NA	NA	False	AATAAA	-18	NA	64844653	64823049	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64824530_64826469_64826556_64826670_64826795_64827049_64827168_64827277_64827399_64827526_64827612_64827685_64827784_64829470_64830071_64830193_64830257_64831504_64831722_64832427_64832510_64832603_64832744_64832825_64832960_64833230_64833337_64833599_64833660_64833737_64833837_64833924_64833978_64834265_64834355_64834428_64834578_64834848_64834964_64835046_64835154_64835346_64835420_64835499_64835622_64835761_64835852_64836116_64836297_64836426_64836531_64836738_64836820_64836921_64837020_64838082_64838163_64838653_64838903_64839032_64839234_64839477_64839572_64840119_64840269_64840552_64840649_64841649_64841734_64841812_64841905_64844409
H1_mix_00014318	chr11	-	4209	5	FSM	ENSG00000110047.18	ENST00000320631.8	4453	5	0	244	0	-244	multi-exon	FALSE	canonical	3	125	junction_4	11.3468057179102	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGAAGTTCATGTTCCCC	0	True	NA	NA	False	NA	NA	NA	64878621	64851885	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64854858_64855321_64855487_64859923_64860337_64874420_64874519_64878060
H1_mix_00014319	chr11	-	6324	41	NNC	ENSG00000110046.13	novel	6318	41	NA	NA	-13	9	at_least_one_novel_splicesite	TRUE	canonical	3	18	junction_29	10.6160256216722	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGATCCTCTGTCCCTGTG	21	False	NA	-5	True	AATAAA	-23	NA	64917224	64894536	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_64895210_64895289_64895443_64896461_64896617_64896747_64896870_64897411_64897495_64897670_64897744_64897838_64897975_64898085_64898171_64898260_64898363_64898635_64898843_64900493_64900630_64900883_64901093_64901961_64902177_64902259_64902387_64902509_64902681_64903287_64903365_64903589_64903661_64905562_64905656_64905741_64905849_64906112_64906194_64906333_64906534_64906664_64906816_64907254_64907416_64907524_64907665_64907747_64907891_64908990_64909151_64909270_64909368_64909680_64909925_64910039_64910196_64910615_64910709_64910806_64910955_64911037_64911276_64911841_64911983_64912084_64912250_64912326_64912424_64913037_64913137_64913265_64913402_64913820_64913924_64914080_64914234_64914337_64914501_64916964
H1_mix_00014321	chr11	-	803	2	FSM	ENSG00000270775.1	ENST00000605239.1	800	2	0	-3	0	3	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTAGGCTTACATACAAC	NA	False	NA	NA	False	NA	NA	NA	65026515	65025386	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65025781_65026106
H1_mix_00014324	chr11	-	2479	6	FSM	ENSG00000146670.10	ENST00000275517.8	2475	6	0	-4	0	4	multi-exon	FALSE	canonical	3	416	junction_1	40.8900966005217	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTTCTTTTATTGAGT	24	True	NA	-1	True	ATTAAA	-22	NA	65084040	65077448	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65079188_65079352_65079788_65083363_65083400_65083484_65083551_65083628_65083724_65083932
H1_mix_00014326	chr11	-	1299	1	FSM	ENSG00000174276.7	ENST00000310597.6	1299	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTTGCTTGTTTCTGA	-17	True	NA	-8	True	AATAAA	-15	NA	65117701	65116402	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65116400_65117700
H1_mix_00014327	chr11	-	696	4	FSM	ENSG00000149806.11	ENST00000531743.5	697	4	0	1	0	0	multi-exon	FALSE	canonical	3	6623	junction_2	167.453476125958	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGCATTGTTTCATCTTTA	8244	False	NA	-5	True	AATAAA	-20	NA	65122057	65120630	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65120807_65120980_65121037_65121499_65121645_65121738
H1_mix_00014328	chr11	-	505	5	FSM	ENSG00000149806.11	ENST00000529639.6	506	5	0	1	0	0	multi-exon	FALSE	canonical	3	5849	junction_4	460.759427467306	1642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGCATTGTTTCATCTTTA	-3	True	NA	-5	True	AATAAA	-20	NA	65122134	65120630	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65120807_65120980_65121037_65121499_65121645_65121738_65121822_65122089
H1_mix_00014329	chr11	-	461	4	FSM	ENSG00000149806.11	ENST00000279259.7	461	4	0	0	0	0	multi-exon	FALSE	canonical	2	83	junction_1	3024.34018515701	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTCATCGCATTGTTTC	8148	False	NA	-12	True	AATAAA	-13	NA	65122153	65120637	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65120807_65121499_65121645_65121738_65121822_65122089
H1_mix_00014330	chr11	-	1125	2	FSM	ENSG00000149806.11	ENST00000529259.1	1125	2	0	0	0	0	multi-exon	FALSE	canonical	3	6994	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGCCAACTCTTAAGTCT	8386	False	NA	-71	True	NA	NA	NA	65121915	65120696	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65121645_65121738
H1_mix_00014331	chr11	-	533	3	FSM	ENSG00000149806.11	ENST00000434372.2	533	3	0	0	0	0	multi-exon	FALSE	canonical	3	5849	junction_2	572.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTCTGGTTATCAGCTT	8124	False	NA	NA	False	NA	NA	NA	65122177	65121282	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65121645_65121738_65121822_65122089
H1_mix_00014332	chr11	-	4549	12	FSM	ENSG00000162298.19	ENST00000449943.5	4547	12	0	-2	0	0	multi-exon	FALSE	canonical	3	77	junction_2	30.6424326332938	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGGGGTTTGTGTCACA	4	True	NA	-29	True	AATAAA	-16	NA	65134487	65127278	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65129916_65130001_65130380_65130659_65130824_65130919_65131037_65131131_65131198_65131273_65131374_65131469_65131597_65132247_65132781_65132921_65133075_65133159_65133253_65133469_65133619_65134455
H1_mix_00014334	chr11	-	3048	16	FSM	ENSG00000162298.19	ENST00000294256.12	3048	16	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_4	33.8602356098648	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGGGGTTTGTGTCACA	-10	True	NA	-29	True	AATAAA	-16	NA	65134532	65127278	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65128489_65128562_65128715_65129728_65129916_65130001_65130173_65130250_65130380_65130659_65130824_65130919_65131037_65131131_65131198_65131273_65131374_65131469_65131597_65132247_65132352_65132731_65132781_65132921_65133075_65133159_65133253_65133469_65133619_65134455
H1_mix_00014335	chr11	-	2092	16	NNC	ENSG00000162298.19	novel	3038	16	NA	NA	-3	341	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	42.5965048122757	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGTCCTGCCACCAAGT	486	False	NA	NA	False	NA	NA	NA	65134503	65128330	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_65128489_65128562_65128837_65129728_65129916_65130001_65130176_65130250_65130380_65130659_65130824_65130919_65131037_65131131_65131198_65131273_65131374_65131469_65131597_65132247_65132352_65132731_65132781_65132921_65133075_65133159_65133253_65133469_65133619_65134455
H1_mix_00014337	chr11	-	775	8	FSM	ENSG00000162298.19	ENST00000528487.1	775	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	52.7051869809213	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGCCCGGCCCTGTCCCC	-9	True	NA	NA	False	NA	NA	NA	65134500	65131273	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65131374_65131469_65131597_65132247_65132352_65132731_65132781_65132921_65133075_65133159_65133208_65133469_65133619_65134455
H1_mix_00014338	chr11	-	2322	1	FSM	ENSG00000255200.1	ENST00000534819.1	2354	1	-53	85	-53	-85	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCCAGTGTTCATCTGAG	5079	False	NA	NA	False	NA	NA	NA	65176523	65174201	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65174200_65176500
H1_mix_00014339	chr11	-	4833	28	FSM	ENSG00000168056.18	ENST00000301873.11	4833	28	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_26	35.9859368965293	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCGGGCTCCCAGCTTC	-4	True	NA	-3	True	NA	NA	NA	65558359	65538558	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65539232_65539327_65539460_65539547_65539629_65539719_65539882_65540012_65540154_65540244_65540383_65540485_65540615_65540870_65540955_65541125_65541294_65541599_65541729_65543104_65543225_65543426_65543550_65546441_65546565_65546797_65546921_65547438_65547568_65547689_65547822_65547919_65548046_65551125_65551225_65551401_65551475_65551547_65551565_65551971_65552158_65552247_65552407_65552859_65552983_65553163_65553257_65553424_65553531_65553700_65553904_65554050_65554381_65557628
H1_mix_00014340	chr11	-	4342	27	FSM	ENSG00000168056.18	ENST00000322147.8	4046	27	-465	169	-65	17	multi-exon	FALSE	canonical	3	13	junction_25	36.4729169198058	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCCGCAGACCCTCCCGG	7598	False	NA	NA	False	NA	NA	NA	65558424	65538973	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65539232_65539327_65539460_65539547_65539629_65539719_65539882_65540244_65540383_65540485_65540615_65540870_65540955_65541125_65541294_65541599_65541729_65543104_65543225_65543426_65543550_65546441_65546565_65546797_65546921_65547438_65547568_65547689_65547822_65547919_65548046_65551125_65551225_65551401_65551475_65551547_65551565_65551971_65552158_65552247_65552407_65552859_65552983_65553163_65553257_65553424_65553531_65553700_65553904_65554050_65554381_65557628
H1_mix_00014347	chr11	-	675	5	NNC	ENSG00000172922.11	novel	2645	4	NA	NA	0	13144	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	156.160774524206	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTAGGAATAAATCTAACC	11	True	NA	NA	False	NA	NA	NA	65720798	65700860	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_65700902_65719683_65719810_65720044_65720165_65720241_65720418_65720586
H1_mix_00014348	chr11	-	2645	4	FSM	ENSG00000172922.11	ENST00000308418.10	2645	4	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_3	39.9694327649962	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGATCAGGTAAAGCCTC	11	True	NA	-5	True	AATAAA	-21	NA	65720798	65717672	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65719810_65720044_65720165_65720241_65720418_65720586
H1_mix_00014349	chr11	-	2798	3	FSM	ENSG00000172922.11	ENST00000528220.2	2798	3	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_1	8.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATTTAACCAATAAAATTT	-9	True	NA	-41	True	NA	NA	NA	65720818	65717708	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65719810_65720044_65720165_65720241
H1_mix_00014350	chr11	-	582	3	FSM	ENSG00000172922.11	ENST00000527610.1	835	3	0	253	0	80	multi-exon	FALSE	canonical	3	296	junction_2	46	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGGATTCTACTGGGTAG	8	True	NA	NA	False	NA	NA	NA	65720801	65719973	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65720165_65720241_65720418_65720586
H1_mix_00014351	chr11	-	6980	2	FSM	ENSG00000254470.3	ENST00000532090.3	6980	2	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	0	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGTTTTTTGTTTTTGGT	-18	True	NA	-12	True	AATAAA	-17	NA	65780976	65773897	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65780343_65780441
H1_mix_00014352	chr11	-	1111	1	FSM	ENSG00000172757.13	ENST00000530157.1	1082	1	-45	16	-45	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATTTGTTTGAATTTT	3052	False	NA	NA	False	TTTAAA	-15	NA	65824148	65823037	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65823000_65824100
H1_mix_00014353	chr11	-	1250	4	FSM	ENSG00000172757.13	ENST00000308162.10	1245	4	0	-5	0	5	multi-exon	FALSE	canonical	3	10777	junction_2	68.3975308196299	4731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGAGACGCCTTTCTGAT	0	True	NA	-30	True	NA	NA	NA	65858180	65854667	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65855449_65855653_65855731_65855934_65856243_65858096
H1_mix_00014355	chr11	-	1509	2	FSM	ENSG00000172757.13	ENST00000530945.1	1509	2	0	0	0	0	multi-exon	FALSE	canonical	3	10925	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGACAATAATAAAA	9495	False	NA	-55	True	ATTAAA	-3	NA	65858194	65854831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65856243_65858096
H1_mix_00014356	chr11	-	1408	4	FSM	ENSG00000172757.13	ENST00000531407.5	1062	4	-312	-34	0	0	multi-exon	FALSE	canonical	3	136	junction_3	5050.01797576559	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGTGCTTGTCTGTTTA	0	True	NA	-87	True	NA	NA	NA	65858180	65854974	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65855449_65855653_65855731_65855934_65856243_65857631
H1_mix_00014357	chr11	-	1000	4	FSM	ENSG00000172757.13	ENST00000524553.5	860	4	-61	-79	8	0	multi-exon	FALSE	canonical	0	0	junction_3	5114.12481923023	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGTGCTTGTCTGTTTA	5026	False	NA	-87	True	NA	NA	NA	65857025	65854974	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65855449_65855653_65855731_65855934_65856243_65856884
H1_mix_00014359	chr11	-	647	3	FSM	ENSG00000172757.13	ENST00000530413.1	647	3	0	0	0	0	multi-exon	FALSE	canonical	3	10777	junction_2	71	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGGAGGTCAAGGACCGCT	5578	False	NA	NA	False	NA	NA	NA	65856473	65855417	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65855449_65855653_65855731_65855934
H1_mix_00014361	chr11	-	2186	5	FSM	ENSG00000172638.13	ENST00000526628.5	2277	5	93	-2	93	1	multi-exon	FALSE	canonical	3	46	junction_1	54.4718964237523	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTCAATCTTTTCTTT	3763	False	NA	-32	True	TATAAA	-22	NA	65869829	65866439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65866713_65866809_65867080_65867860_65868057_65868294_65868422_65868509
H1_mix_00014362	chr11	-	1511	11	FSM	ENSG00000172638.13	ENST00000528176.5	1504	11	0	-7	0	1	multi-exon	FALSE	canonical	3	13	junction_1	56.2086292307507	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTCAATCTTTTCTTT	25	True	NA	-32	True	TATAAA	-22	NA	65872743	65866439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65866713_65867860_65868057_65868294_65868422_65868509_65868630_65869856_65869977_65870120_65870238_65870535_65870659_65871156_65871364_65871969_65872019_65872243_65872362_65872682
H1_mix_00014366	chr11	-	990	5	FSM	ENSG00000172500.13	ENST00000534032.5	982	5	0	-8	0	7	multi-exon	FALSE	canonical	3	671	junction_4	64.3481740222673	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGGTTTATTCAGGCT	7577	False	NA	6	True	NA	NA	NA	65885572	65883732	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65884044_65884391_65884490_65884569_65884999_65885077_65885187_65885529
H1_mix_00014368	chr11	-	1443	10	FSM	ENSG00000172500.13	ENST00000338369.6	1261	10	6	-188	6	7	multi-exon	FALSE	canonical	3	119	junction_5	220.660120748831	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGGTTTATTCAGGCT	4624	False	NA	6	True	NA	NA	NA	65888525	65883732	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65884044_65884391_65884490_65884569_65884657_65884934_65884999_65885077_65885187_65885508_65885664_65886321_65886423_65887599_65887727_65887933_65888133_65888333
H1_mix_00014374	chr11	-	1977	4	FSM	ENSG00000175592.9	ENST00000312562.7	1702	4	-31	-244	0	244	multi-exon	FALSE	canonical	3	24	junction_1	8.65383665716478	3077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGGGGAAGTCTGGTTTA	-1	True	NA	NA	False	GGGGCT	-25	NA	65900419	65891804	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65893297_65894013_65894122_65896808_65897007_65900240
H1_mix_00014378	chr11	-	2948	6	FSM	ENSG00000175376.9	ENST00000526451.5	2761	6	0	-187	0	187	multi-exon	FALSE	canonical	0	0	junction_5	35.1283361405006	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGGCGCCATCTCGGCT	-8	True	NA	NA	False	NA	NA	NA	66002156	65996357	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65998744_65999349_65999398_65999566_65999676_66000052_66000162_66000302_66000482_66002039
H1_mix_00014382	chr11	-	2133	4	NNC	ENSG00000175229.7	novel	3301	3	NA	NA	0	29466	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	110.855260988773	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGCCGGGCATGAGGGCT	0	True	NA	NA	False	NA	NA	NA	66049151	66011298	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_66011330_66041953_66043678_66045290_66045528_66049010
H1_mix_00014383	chr11	-	3311	3	FSM	ENSG00000175229.7	ENST00000312006.5	3301	3	10	-20	0	20	multi-exon	FALSE	canonical	3	230	junction_2	5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGGTGTCCTCTGGCCCC	0	True	NA	NA	False	AGTAAA	-34	NA	66049151	66040744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66043678_66045290_66045528_66049010
H1_mix_00014385	chr11	-	540	3	FSM	ENSG00000174851.16	ENST00000494836.2	540	3	0	0	0	0	multi-exon	FALSE	canonical	3	1205	junction_2	8	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTCTGACCCTTGTTC	6125	False	NA	-8	True	NA	NA	NA	66285623	66284580	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66284784_66284872_66284967_66285380
H1_mix_00014386	chr11	-	1097	8	FSM	ENSG00000174851.16	ENST00000376901.9	1097	8	0	0	0	0	multi-exon	FALSE	canonical	3	1191	junction_3	97.9339635902162	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTGACCCTTGTTCC	-5	True	NA	-7	True	NA	NA	NA	66289143	66284579	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66284784_66284872_66284967_66285380_66285537_66285700_66285759_66287597_66287677_66287811_66287917_66288080_66288293_66288954
H1_mix_00014387	chr11	-	943	7	FSM	ENSG00000174851.16	ENST00000359461.10	943	7	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_2	460.819921444375	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTGACCCTTGTTCC	-7	True	NA	-7	True	NA	NA	NA	66289145	66284579	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66284784_66284872_66284967_66285700_66285759_66287597_66287677_66287811_66287917_66288080_66288293_66288954
H1_mix_00014390	chr11	-	2551	1	FSM	ENSG00000174807.4	ENST00000311330.4	2551	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGGCTTCTGACCCCCA	0	True	NA	-7	True	AATAAA	-17	NA	66317044	66314493	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66314500_66317000
H1_mix_00014392	chr11	-	1430	10	FSM	ENSG00000174744.14	ENST00000359957.8	1424	10	0	-6	0	0	multi-exon	FALSE	canonical	3	336	junction_4	25.7499850173755	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCCCTGTGTGTGTGTGT	3	True	NA	-6	True	ATTAAA	-20	NA	66345104	66337332	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66337890_66338242_66338283_66338720_66338786_66340120_66340214_66340773_66340871_66340966_66341047_66341205_66341334_66341532_66341624_66342095_66342242_66344971
H1_mix_00014393	chr11	-	1363	10	FSM	ENSG00000174744.14	ENST00000425825.6	1363	10	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	117.86055791108	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCCCTGTGTGTGTGTGT	-12	True	NA	-6	True	ATTAAA	-20	NA	66345119	66337332	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66337808_66338242_66338283_66338720_66338786_66340120_66340214_66340773_66340871_66340966_66341047_66341205_66341334_66341532_66341624_66342095_66342242_66344971
H1_mix_00014394	chr11	-	1817	9	FSM	ENSG00000174744.14	ENST00000530238.5	1817	9	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_3	27.1773688020014	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGGACTGGAATTAAAACC	18	True	NA	-42	True	NA	NA	NA	66345089	66337368	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66337890_66338242_66338786_66340120_66340214_66340773_66340871_66340966_66341047_66341205_66341334_66341532_66341624_66342095_66342242_66344971
H1_mix_00014395	chr11	-	2012	2	FSM	ENSG00000174684.7	ENST00000311181.5	2007	2	0	-5	0	5	multi-exon	FALSE	canonical	3	303	junction_1	0	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCCGTTACTCTCCTGAG	-12	True	NA	2	True	AATAAA	-22	NA	66347629	66345368	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66346241_66346489
H1_mix_00014396	chr11	-	2127	10	NIC	ENSG00000174669.12	novel	2455	12	NA	NA	272	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_8	64.4890650123945	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCGTTCACCAAGTCTT	1085	False	NA	-34	True	NA	NA	NA	66371375	66362520	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_66363548_66364224_66364425_66365935_66366022_66366125_66366192_66366430_66366565_66367463_66367549_66367771_66367870_66368536_66368672_66369368_66369533_66371243
H1_mix_00014397	chr11	-	2455	12	FSM	ENSG00000174669.12	ENST00000357440.7	2455	12	0	0	0	0	multi-exon	TRUE	canonical	3	107	junction_9	33.3664848920228	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCGTTCACCAAGTCTT	5	True	NA	-34	True	NA	NA	NA	66371760	66362520	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66363548_66364224_66364425_66365935_66366022_66366125_66366232_66366430_66366565_66367463_66367549_66367771_66367870_66368536_66368672_66369059_66369200_66369368_66369533_66371243_66371326_66371562
H1_mix_00014398	chr11	-	2381	11	FSM	ENSG00000174669.12	ENST00000619145.4	2380	11	0	-1	0	0	multi-exon	FALSE	canonical	3	17	junction_4	54.5659234321202	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCGTTCACCAAGTCTT	640	False	NA	-34	True	NA	NA	NA	66371820	66362520	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66363548_66364224_66364425_66365935_66366022_66366125_66366232_66367463_66367549_66367771_66367870_66368536_66368672_66369059_66369200_66369368_66369533_66371243_66371326_66371562
H1_mix_00014399	chr11	-	2511	13	FSM	ENSG00000174669.12	ENST00000546034.1	2509	13	0	-2	0	0	multi-exon	FALSE	canonical	3	9	junction_12	53.2986866629939	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCGTTCACCAAGTCTT	246	False	NA	-34	True	NA	NA	NA	66372214	66362520	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66363548_66364224_66364425_66365935_66366022_66366125_66366232_66366430_66366565_66367463_66367549_66367771_66367870_66368536_66368672_66369059_66369200_66369368_66369533_66371243_66371326_66371562_66371612_66372009
H1_mix_00014400	chr11	-	1698	5	FSM	ENSG00000174547.13	ENST00000310999.11	1605	5	14	-107	0	107	multi-exon	FALSE	canonical	3	1174	junction_4	171.801302381559	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATAGCTGTACAACGCTG	-13	True	NA	89	True	AAAACA	-17	NA	66438834	66434967	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66436113_66437103_66437264_66437349_66437444_66438163_66438260_66438631
H1_mix_00014401	chr11	-	1705	5	FSM	ENSG00000174547.13	ENST00000430466.6	1527	5	-184	6	-184	-1	multi-exon	FALSE	canonical	3	447	junction_4	471.301654993912	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCAGATGAGACTTCTGC	NA	False	NA	-24	True	AATAAA	-19	NA	66439032	66435080	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66436113_66437103_66437264_66437349_66437444_66438163_66438260_66438709
H1_mix_00014402	chr11	-	1990	6	FSM	ENSG00000174547.13	ENST00000329819.4	922	6	-198	-870	-184	107	multi-exon	FALSE	canonical	0	0	junction_1	677.61995248074	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATAGCTGTACAACGCTG	NA	False	NA	89	True	AAAACA	-17	NA	66439032	66434967	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66436113_66436815_66436910_66437103_66437264_66437349_66437444_66438163_66438260_66438631
H1_mix_00014403	chr11	-	1888	5	FSM	ENSG00000174547.13	ENST00000534488.5	812	5	-206	-870	-184	107	multi-exon	FALSE	canonical	3	29	junction_3	637.909280383974	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATAGCTGTACAACGCTG	NA	False	NA	89	True	AAAACA	-17	NA	66439032	66434967	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66436113_66437103_66437264_66437349_66437436_66438163_66438260_66438631
H1_mix_00014404	chr11	-	944	2	FSM	ENSG00000255517.7	ENST00000527274.3	982	2	38	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGTGTCTGGAGAGTGC	13	True	NA	NA	False	ATTAAA	-24	NA	66480231	66477345	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66478097_66480038
H1_mix_00014406	chr11	-	4803	3	FSM	ENSG00000174165.8	ENST00000310442.5	4803	3	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	8.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCATGCCTTTTTAAATTG	0	True	NA	NA	False	AATAAA	-23	NA	66546048	66535625	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66539825_66543703_66543982_66545722
H1_mix_00014408	chr11	-	3111	1	FSM	ENSG00000182791.5	ENST00000333861.5	2888	1	-228	5	-228	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAGAACTGAGACCTTGG	NA	False	NA	-11	True	AATACA	-18	NA	66593291	66590180	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66590200_66593300
H1_mix_00014409	chr11	-	2339	3	FSM	ENSG00000173914.12	ENST00000525754.5	2339	3	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	10	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTTTATGTTTGTCTT	95	False	NA	-4	True	AATAAA	-18	NA	66677748	66664997	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66665579_66668614_66669292_66676667
H1_mix_00014410	chr11	-	2570	4	FSM	ENSG00000173914.12	ENST00000310046.9	1806	4	63	-827	0	827	multi-exon	FALSE	canonical	3	80	junction_1	52.4933858267454	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGGCATGGTGGTGCAT	19	True	NA	NA	False	NA	NA	NA	66677824	66664170	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66665579_66668614_66669292_66676667_66677092_66677763
H1_mix_00014416	chr11	-	2304	2	FSM	ENSG00000173914.12	ENST00000531036.2	1646	2	-97	-561	-87	561	multi-exon	FALSE	canonical	3	200	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGAAGGAGGGTTTTCTCC	NA	False	NA	NA	False	NA	NA	NA	66677974	66674998	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66677092_66677763
H1_mix_00014419	chr11	-	11217	38	NNC	ENSG00000173898.15	novel	8732	39	NA	NA	768	2	intron_retention	FALSE	canonical	2	5	junction_37	44.5576587414564	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGACTTTTTAAATGTG	895	False	NA	-13	True	ATTAAA	-17	NA	66728448	66682494	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_66686105_66686397_66686441_66686993_66687168_66687426_66687648_66687867_66687919_66688003_66688080_66688168_66688312_66688652_66688850_66689095_66689181_66689804_66689944_66690038_66690284_66691283_66691659_66692535_66692741_66692969_66693101_66693185_66693447_66693771_66693862_66694138_66694364_66696276_66696541_66698638_66698786_66698991_66699083_66699405_66699609_66700525_66701283_66701583_66701722_66704597_66705469_66705683_66705838_66707515_66707819_66708140_66708300_66708901_66709020_66710581_66710770_66710916_66711030_66713630_66713747_66714090_66714172_66714315_66714408_66715221_66715396_66715829_66715982_66721083_66721263_66721349_66721533_66727985
H1_mix_00014422	chr11	-	4018	22	FSM	ENSG00000173599.15	ENST00000393958.7	4017	22	0	-1	0	1	multi-exon	FALSE	canonical	3	58	junction_8	10.6215030259663	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGATCCTGTGCAGCCCC	-1	True	NA	-5	True	AATAAA	-24	NA	66958383	66848518	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66849148_66849229_66849371_66849610_66849860_66849936_66850117_66850219_66850465_66850673_66850924_66851039_66851281_66851789_66851947_66852438_66852661_66852746_66852837_66853238_66853384_66863773_66863957_66866186_66866350_66868845_66868965_66870301_66870454_66870774_66870893_66871051_66871198_66871314_66871481_66871686_66871872_66872023_66872160_66952429_66952469_66958321
H1_mix_00014424	chr11	-	1807	13	FSM	ENSG00000173599.15	ENST00000528403.6	1807	13	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_12	30.6280327296562	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCAGAGCTGTTCCAGCT	-1	True	NA	NA	False	NA	NA	NA	66958383	66853302	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66853384_66863773_66863957_66866186_66866350_66868845_66868965_66870301_66870454_66870774_66870893_66871051_66871198_66871314_66871481_66871686_66871872_66872023_66872160_66952429_66952469_66957739_66957997_66958321
H1_mix_00014425	chr11	-	953	1	FSM	ENSG00000287851.1	ENST00000661765.1	893	1	-65	5	-65	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAACATGTGTGGTTATTT	NA	False	NA	NA	False	AATAAA	-30	NA	67317496	67316543	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67316500_67317500
H1_mix_00014426	chr11	-	1694	4	FSM	ENSG00000175482.9	ENST00000312419.8	1694	4	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_3	41.2660743091573	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGGCGCAGTGGCTCAC	-10	True	NA	NA	False	AATAAA	-16	NA	67353546	67350771	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67352020_67352690_67352803_67352987_67353078_67353302
H1_mix_00014427	chr11	-	1491	4	FSM	ENSG00000175482.9	ENST00000529704.5	1486	4	0	-5	0	0	multi-exon	FALSE	canonical	3	45	junction_3	82.7405583737504	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGGCGCAGTGGCTCAC	3396	False	NA	NA	False	AATAAA	-16	NA	67353579	67350771	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67352020_67352690_67352803_67352987_67353078_67353538
H1_mix_00014430	chr11	-	1421	7	FSM	ENSG00000172531.16	ENST00000376745.9	1421	7	0	0	0	0	multi-exon	FALSE	canonical	3	2292	junction_2	284.595277933809	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGGCCTCCGTCTCACA	-19	True	NA	-8	True	AATAAA	-19	NA	67401858	67398182	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67398646_67398721_67398857_67398939_67399164_67399560_67399666_67400688_67400920_67401067_67401200_67401727
H1_mix_00014431	chr11	-	1483	7	FSM	ENSG00000172531.16	ENST00000532446.5	1465	7	0	-18	0	0	multi-exon	FALSE	canonical	1	62	junction_6	1061.75411727742	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGGCCTCCGTCTCACA	13	True	NA	-8	True	AATAAA	-19	NA	67401577	67398182	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67398646_67398721_67398857_67398939_67399164_67399560_67399666_67400688_67400920_67401067_67401200_67401384
H1_mix_00014432	chr11	-	1495	6	FSM	ENSG00000172531.16	ENST00000526510.6	1483	6	0	-12	0	0	multi-exon	FALSE	canonical	3	2805	junction_1	129.544741305852	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGGATTCTCGCCATG	-24	True	NA	-22	True	AATAAA	-5	NA	67401863	67398196	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67398646_67398721_67399164_67399560_67399666_67400688_67400920_67401067_67401200_67401727
H1_mix_00014433	chr11	-	2832	5	FSM	ENSG00000172531.16	ENST00000677322.1	2832	5	0	0	0	0	multi-exon	FALSE	canonical	3	2292	junction_2	298.151806970879	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGGATTCTCGCCATG	-24	True	NA	-22	True	AATAAA	-5	NA	67401863	67398196	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67398646_67398721_67398857_67398939_67400920_67401067_67401200_67401727
H1_mix_00014434	chr11	-	1823	6	FSM	ENSG00000172531.16	ENST00000677343.1	1809	6	0	-14	0	0	multi-exon	FALSE	canonical	3	2292	junction_2	298.269274314335	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGGCCTCCGTCTCACA	-24	True	NA	-8	True	AATAAA	-19	NA	67401863	67398182	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67398646_67398721_67398857_67398939_67399666_67400688_67400920_67401067_67401200_67401727
H1_mix_00014435	chr11	-	2435	6	FSM	ENSG00000172531.16	ENST00000532279.2	2430	6	0	-5	0	0	multi-exon	FALSE	canonical	3	2292	junction_2	290.652644921735	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGGATTCTCGCCATG	-24	True	NA	-22	True	AATAAA	-5	NA	67401863	67398196	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67398646_67398721_67398857_67398939_67399164_67399560_67400920_67401067_67401200_67401727
H1_mix_00014437	chr11	-	1695	6	FSM	ENSG00000172531.16	ENST00000679175.1	1677	6	0	-18	0	0	multi-exon	FALSE	canonical	3	2292	junction_2	288.100954528096	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGGCCTCCGTCTCACA	-14	True	NA	-8	True	AATAAA	-19	NA	67401604	67398182	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67398646_67398721_67398857_67398939_67399164_67399560_67399666_67400688_67400920_67401067
H1_mix_00014440	chr11	-	4412	11	FSM	ENSG00000172725.14	ENST00000341356.10	4411	11	0	-1	0	1	multi-exon	FALSE	canonical	3	416	junction_6	48.3455271974564	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTGGTCCTACAGAGAC	5	True	NA	-1	True	AATAAA	-18	NA	67443476	67435508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67438502_67438670_67438950_67439785_67439844_67440117_67440264_67440334_67440440_67441124_67441245_67441332_67441515_67441732_67441863_67441965_67442089_67442427_67442631_67443403
H1_mix_00014441	chr11	-	4469	12	FSM	ENSG00000172725.14_ENSG00000213402.3	ENST00000393893.5	1931	12	0	-2538	0	0	multi-exon	FALSE	canonical	3	7	junction_11	155.638540766421	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTGTGGTCCTACAGAGA	-7	True	NA	-2	True	AATAAA	-17	NA	67443821	67435509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67438502_67438670_67438950_67439785_67439844_67440117_67440264_67440334_67440440_67441124_67441245_67441332_67441515_67441732_67441863_67441965_67442089_67442427_67442631_67443403_67443466_67443752
H1_mix_00014444	chr11	-	2932	7	FSM	ENSG00000172663.9	ENST00000308022.7	3551	7	0	619	0	-619	multi-exon	FALSE	canonical	3	606	junction_5	94.9789450352024	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTAATTAGACATAAAATTA	-3	True	NA	NA	False	AATACA	-25	NA	67469251	67462328	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67464697_67464802_67464857_67465055_67465101_67467311_67467389_67467500_67467591_67468027_67468093_67469018
H1_mix_00014446	chr11	-	1063	7	FSM	ENSG00000172663.9	ENST00000545682.5	1063	7	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_3	275.169442747959	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAATTGCTCTCCTCCTGT	9	True	NA	-9	True	AATAAA	-22	NA	67469239	67464352	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67464697_67464802_67464857_67465055_67465268_67467311_67467389_67467500_67467591_67468027_67468093_67469018
H1_mix_00014447	chr11	-	823	6	FSM	ENSG00000172663.9	ENST00000393877.3	823	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	289.697083174822	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTTGTGCTAATAAAAG	-2	True	NA	-48	True	NA	NA	NA	67469250	67464391	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67464697_67464802_67464857_67467311_67467389_67467500_67467591_67468027_67468093_67469018
H1_mix_00014448	chr11	-	859	4	FSM	ENSG00000172663.9	ENST00000535585.5	859	4	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_2	299.560047773768	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGATGGGGGAACTTTTG	-3	True	NA	NA	False	NA	NA	NA	67469168	67466807	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67467389_67467500_67467564_67468027_67468093_67469018
H1_mix_00014450	chr11	-	4278	24	FSM	ENSG00000110697.13	ENST00000436757.6	4216	24	26	-88	0	88	multi-exon	FALSE	canonical	3	72	junction_10	58.5080092428178	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCCAGGGCCATCCAGCT	14	True	NA	79	True	NA	NA	NA	67505339	67491679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67492297_67492933_67493063_67493409_67493594_67493687_67493838_67493921_67494071_67494243_67494361_67494845_67494957_67495076_67495226_67495437_67495603_67496177_67496346_67497230_67497437_67497521_67497680_67497916_67498025_67498132_67498323_67498595_67498847_67498939_67499002_67499722_67499831_67499913_67500010_67500094_67500422_67501861_67502087_67502291_67502414_67502503_67502719_67504102_67504222_67505187
H1_mix_00014451	chr11	-	4240	24	NNC	ENSG00000110697.13	novel	4217	24	NA	NA	0	88	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_3	68.2424234284475	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCCAGGGCCATCCAGCT	14	True	NA	79	True	NA	NA	NA	67505339	67491679	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_67492297_67492933_67493063_67493409_67493553_67493687_67493838_67493921_67494071_67494243_67494361_67494845_67494957_67495076_67495226_67495437_67495603_67496177_67496349_67497230_67497437_67497521_67497680_67497916_67498025_67498132_67498323_67498595_67498847_67498939_67499002_67499722_67499831_67499913_67500010_67500094_67500422_67501861_67502087_67502291_67502414_67502503_67502719_67504102_67504222_67505187
H1_mix_00014452	chr11	-	3713	13	FSM	ENSG00000110697.13	ENST00000527370.5	3712	13	0	-1	0	0	multi-exon	FALSE	canonical	3	256	junction_7	41.9015877450432	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACTCACCCCATGCCTGG	10027	False	NA	-9	True	AATAAA	-17	NA	67498637	67491767	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67492297_67492933_67493063_67493409_67493594_67493687_67493838_67493921_67494071_67494243_67494361_67494845_67494957_67495076_67495226_67495437_67495603_67496177_67497437_67497521_67497680_67497916_67498025_67498132
H1_mix_00014454	chr11	-	4177	24	NNC	ENSG00000110697.13	novel	4217	24	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_2	67.6023064225504	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACTCACCCCATGCCTGG	26	True	NA	-9	True	AATAAA	-17	NA	67505327	67491767	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_67492297_67492933_67493059_67493409_67493594_67493687_67493838_67493921_67494071_67494243_67494361_67494845_67494957_67495076_67495226_67495437_67495603_67496177_67496349_67497230_67497437_67497521_67497680_67497916_67498025_67498132_67498323_67498595_67498847_67498939_67499002_67499722_67499831_67499913_67500010_67500094_67500422_67501861_67502087_67502291_67502414_67502503_67502719_67504102_67504222_67505187
H1_mix_00014455	chr11	-	4217	24	FSM	ENSG00000110697.13	ENST00000356404.8	4217	24	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_10	43.0005055582009	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACTCACCCCATGCCTGG	-10	True	NA	-9	True	AATAAA	-17	NA	67505363	67491767	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67492297_67492933_67493063_67493409_67493594_67493687_67493838_67493921_67494071_67494243_67494361_67494845_67494957_67495076_67495226_67495437_67495603_67496177_67496349_67497230_67497437_67497521_67497680_67497916_67498025_67498132_67498323_67498595_67498847_67498939_67499002_67499722_67499831_67499913_67500010_67500094_67500422_67501861_67502087_67502291_67502414_67502503_67502719_67504102_67504222_67505187
H1_mix_00014460	chr11	-	922	4	FSM	ENSG00000167797.8	ENST00000301488.8	909	4	0	-13	0	13	multi-exon	FALSE	canonical	3	580	junction_3	49.3851079667635	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTCTGGTTCTTCAGCT	-1	True	NA	1	True	AATAAA	-38	NA	67508162	67506483	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67507013_67507364_67507498_67507591_67507690_67508000
H1_mix_00014461	chr11	-	1692	3	FSM	ENSG00000167797.8	ENST00000525402.5	1692	3	0	0	0	0	multi-exon	FALSE	canonical	3	670	junction_2	12.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTTGTGCTCTCAGCTCT	15	True	NA	-27	True	AATAAA	-10	NA	67508649	67506511	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67507013_67507364_67507498_67507591
H1_mix_00014462	chr11	-	923	4	FSM	ENSG00000167797.8	ENST00000531178.1	923	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	304.933872612845	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCACAGGCCTGGCACCT	3	True	NA	-57	True	NA	NA	NA	67508158	67506619	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67507013_67507364_67507498_67507591_67507690_67507859
H1_mix_00014464	chr11	-	956	4	FSM	ENSG00000167799.10	ENST00000376693.3	745	4	-166	-45	-166	45	multi-exon	FALSE	canonical	3	59	junction_1	4.18993502999218	267	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCAGGTCGCTGGCTGGG	9656	False	NA	44	True	NA	NA	NA	67630103	67627892	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67628252_67628322_67628401_67628918_67629052_67629717
H1_mix_00014466	chr11	-	381	1	FSM	ENSG00000239559.2	ENST00000472498.2	287	1	-26	-68	-26	68	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATAAAAGCCAAAG	-3	True	NA	NA	False	AATAAA	-34	NA	67683084	67682703	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67682700_67683100
H1_mix_00014467	chr11	-	1814	3	FSM	ENSG00000160172.10	ENST00000531806.5	1814	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	22.5	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTTGGCAAGAATGATG	NA	False	NA	NA	False	NA	NA	NA	67805322	67791647	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67793294_67803001_67803065_67805217
H1_mix_00014468	chr11	-	3695	2	FSM	ENSG00000160172.10	ENST00000528089.1	2496	2	-1166	-33	-1166	16	multi-exon	FALSE	canonical	3	47	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTACTTTCACACCACAACA	NA	False	NA	NA	False	NA	NA	NA	67798835	67791750	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67793294_67796683
H1_mix_00014470	chr11	-	267	1	FSM	ENSG00000243672.1	ENST00000480160.1	781	1	365	149	365	-149	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAAAATGCTGGAGA	NA	False	NA	NA	False	NA	NA	NA	67926066	67925799	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67925800_67926100
H1_mix_00014472	chr11	-	2294	11	FSM	ENSG00000110057.8	ENST00000227471.7	2294	11	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_10	36.3578052142865	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGAGTCCCAGGCCGCG	-9	True	NA	-1	True	AATAAA	-21	NA	68004097	67991099	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67991858_67993675_67993795_67995610_67995885_67996601_67996785_67997674_67997800_67998358_67998453_67999172_67999306_67999518_67999681_68003021_68003176_68003656_68003799_68003947
H1_mix_00014476	chr11	-	2714	12	FSM	ENSG00000110721.12	ENST00000265689.9	2714	12	0	0	0	0	multi-exon	TRUE	canonical	3	617	junction_10	114.795686272511	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAAGCTGTCACCCTTGG	-3	True	NA	-14	True	AATAAA	-16	NA	68121388	68052858	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_68054048_68061952_68062035_68064524_68064632_68065785_68065895_68066428_68066517_68068878_68068938_68070188_68070294_68070723_68070858_68074716_68074831_68081403_68081458_68097018_68097131_68120827
H1_mix_00014477	chr11	-	1204	6	FSM	ENSG00000110721.12	ENST00000525155.5	1201	6	0	-3	0	0	multi-exon	FALSE	canonical	2	4	junction_1	409.726445326635	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTCGCCAGTCACTGCT	NA	False	NA	NA	False	NA	NA	NA	68066460	68053511	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_68054048_68061492_68061831_68061952_68062035_68064524_68064632_68065785_68065895_68066428
H1_mix_00014478	chr11	-	1755	11	FSM	ENSG00000110721.12	ENST00000356135.9	1755	11	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_9	217.923495750229	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATCTCTTGTTTACGAT	NA	False	NA	-7	True	ATTAAA	-16	NA	68121444	68053819	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_68054048_68061952_68062035_68064524_68064632_68065785_68065895_68066428_68066517_68068878_68068938_68070188_68070294_68070723_68070858_68074716_68074831_68097018_68097131_68120827
H1_mix_00014481	chr11	-	5719	11	FSM	ENSG00000110066.15	ENST00000304363.9	5718	11	0	-1	0	1	multi-exon	FALSE	canonical	3	67	junction_1	120.079806795314	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCCGGTGTTCACTGTAT	8	True	NA	NA	False	AATAAA	-19	NA	68213296	68154861	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_68159172_68166981_68167179_68171014_68171152_68171231_68171252_68171542_68171710_68173803_68173914_68175017_68175184_68180131_68180201_68185780_68185929_68189916_68190153_68213137
H1_mix_00014482	chr11	-	6010	12	NNC	ENSG00000110066.15	novel	2475	12	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_8	153.575620052078	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGCCGGTGTTCACTGT	288	False	NA	NA	False	AATAAA	-17	NA	68213567	68154863	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_68159172_68166981_68167179_68171014_68171152_68171231_68171252_68171542_68171710_68173803_68173914_68175017_68175184_68179469_68179831_68180131_68180201_68185780_68185929_68189916_68190153_68213476
H1_mix_00014483	chr11	-	2816	10	FSM	ENSG00000110066.15	ENST00000441488.6	2816	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	144.149956214156	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCAGCATACTATTGTA	72	False	NA	NA	False	NA	NA	NA	68190081	68157579	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_68159172_68166981_68167179_68171014_68171152_68171231_68171297_68171542_68171710_68173803_68173914_68175017_68175184_68180131_68180201_68185780_68185929_68189916
H1_mix_00014484	chr11	-	2712	10	FSM	ENSG00000110066.15	ENST00000401547.6	2666	10	-44	-2	-13	2	multi-exon	FALSE	canonical	3	116	junction_9	92.8595115692996	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGAGTCTGGTTCCTT	-26	True	NA	2	True	AATAAA	-21	NA	68213330	68165712	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_68167179_68171014_68171152_68171231_68171252_68171542_68171710_68173803_68173914_68175017_68175184_68180131_68180201_68185780_68185929_68189916_68190153_68213137
H1_mix_00014485	chr11	-	2867	10	FSM	ENSG00000110066.15	ENST00000405515.5	2869	10	0	2	0	-2	multi-exon	FALSE	canonical	3	282	junction_9	55.8412653293265	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTCTGAGTCTGGTT	27	False	NA	-2	True	AATAAA	-17	NA	68213828	68165716	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_68167179_68171014_68171152_68171231_68171252_68171542_68171710_68173803_68173914_68175017_68175184_68180131_68180201_68185780_68185929_68189916_68190153_68213476
H1_mix_00014486	chr11	-	1605	11	FSM	ENSG00000110066.15	ENST00000402789.5	1599	11	0	-6	0	2	multi-exon	FALSE	canonical	3	40	junction_1	108.976190060031	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGAGTCTGGTTCCTT	40	True	NA	2	True	AATAAA	-21	NA	68213595	68165712	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_68165949_68166981_68167179_68171014_68171152_68171231_68171252_68171542_68171710_68173803_68173914_68175017_68175184_68180131_68180201_68185780_68185929_68189916_68190153_68213476
H1_mix_00014489	chr11	-	2072	4	FSM	ENSG00000171067.11	ENST00000304271.11	2071	4	0	-1	0	1	multi-exon	FALSE	canonical	3	256	junction_1	14.6590889515307	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCGTGTGGGTGCATCCTG	26	False	68271999	-23	True	ATTAAA	-19	NA	68271973	68261336	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_68262919_68263691_68263867_68268053_68268252_68271856
H1_mix_00014490	chr11	-	980	5	FSM	ENSG00000171067.11	ENST00000533310.5	980	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	110.209743217195	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTCCTTTCCTTTTGCCT	-5	True	NA	NA	False	NA	NA	NA	68271947	68261608	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_68261726_68262730_68262919_68263691_68263867_68268053_68268252_68271645
H1_mix_00014491	chr11	-	509	3	FSM	ENSG00000260808.1	ENST00000565199.1	503	3	0	-6	0	6	multi-exon	FALSE	canonical	3	36	junction_1	8.5	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGAGTGCATCTAAGCT	NA	False	NA	-2	True	AATAAA	-41	NA	68616230	68612892	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_68613222_68615881_68616020_68616188
H1_mix_00014495	chr11	-	2535	10	FSM	ENSG00000132749.11	ENST00000255087.10	2535	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	46.716639909613	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGTCATTAACTTAGTA	-34	True	NA	-24	True	AATAAA	-19	NA	68751520	68707439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_68708501_68710873_68711050_68713269_68713408_68715836_68715940_68738699_68738789_68742317_68742395_68744990_68745112_68747207_68747367_68750189_68750700_68751419
H1_mix_00014497	chr11	-	10843	3	NIC	ENSG00000132749.11	novel	643	2	NA	NA	0	0	intron_retention	FALSE	canonical	3	49	junction_1	65	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTCTCTGGAAATTTTTT	6884	False	NA	-5	True	AATAAA	-16	NA	68750611	68736131	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_68737886_68738699_68747367_68750189
H1_mix_00014498	chr11	-	2593	5	NIC	ENSG00000132749.11	novel	3495	5	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	48.91829923454	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTCTCTGGAAATTTTTT	-14	True	NA	-5	True	AATAAA	-16	NA	68751500	68736131	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_68737886_68738699_68738789_68747207_68747367_68750189_68750700_68751419
H1_mix_00014499	chr11	-	995	4	ISM	ENSG00000132749.11	ENST00000544963.1	1235	6	-46	6411	14	0	5prime_fragment	FALSE	canonical	3	34	junction_1	61.0300472445063	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCGTAGTCCATATTAGTA	-20	True	NA	-1	True	ATTAAA	-17	NA	68751506	68744872	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_68745112_68747207_68747367_68750189_68750700_68751419
H1_mix_00014501	chr11	-	766	3	ISM	ENSG00000132749.11	ENST00000544963.1	1235	6	6	8684	6	0	5prime_fragment	FALSE	canonical	3	75	junction_2	52	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTCGACTGATCATTTC	32	True	NA	-36	True	ACTAAA	-19	NA	68751454	68747145	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_68747367_68750189_68750700_68751419
H1_mix_00014502	chr11	-	662	7	FSM	ENSG00000197345.13	ENST00000450904.6	662	7	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_5	442.369252497905	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGTTTCTGTGTTCTGGT	33	False	NA	-7	True	AATAAA	-20	NA	68903786	68891275	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_68891396_68892889_68892994_68893402_68893456_68896514_68896679_68897926_68898013_68900534_68900606_68903722
H1_mix_00014503	chr11	-	693	7	FSM	ENSG00000197345.13	ENST00000362034.7	693	7	0	0	0	0	multi-exon	FALSE	canonical	3	1274	junction_2	67.6816485877491	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCAGGTTTCTGTGTTCTG	-13	True	NA	-9	True	AATAAA	-18	NA	68903832	68891277	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_68891396_68892889_68892994_68893402_68893456_68896514_68896679_68897926_68898013_68900547_68900606_68903722
H1_mix_00014504	chr11	-	768	7	FSM	ENSG00000197345.13	ENST00000541279.1	764	7	0	-4	0	0	multi-exon	FALSE	canonical	3	46	junction_2	513.307061016005	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCAGGTTTCTGTGTTCT	-8	True	NA	-10	True	AATAAA	-17	NA	68903827	68891278	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_68891396_68892889_68892994_68893321_68893456_68896514_68896679_68897926_68898013_68900547_68900606_68903722
H1_mix_00014506	chr11	-	2156	3	FSM	ENSG00000172935.9	ENST00000309099.7	2132	3	0	-24	0	21	multi-exon	FALSE	canonical	3	37	junction_1	5.5	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTACCCTGGGTCTCTGTT	4	True	NA	2	True	AATAAA	-41	NA	69013246	69004373	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_69006262_69009853_69009958_69013082
H1_mix_00014507	chr11	-	2484	5	FSM	ENSG00000149716.13	ENST00000279147.9	2484	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	4.7169905660283	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGGGACCATTTATAACA	-19	True	NA	2	True	AGTAAA	-21	NA	69675353	69665562	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_69667588_69667894_69668013_69671748_69671820_69673215_69673322_69675189
H1_mix_00014508	chr11	-	988	3	FSM	ENSG00000149716.13	ENST00000537272.6	988	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	23	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTGTTTTGTAAGTT	7364	False	NA	-84	True	NA	NA	NA	69668012	69665648	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_69666410_69667478_69667588_69667894
H1_mix_00014510	chr11	-	788	3	FSM	ENSG00000149716.13	ENST00000542341.1	775	3	0	-13	0	13	multi-exon	FALSE	canonical	3	59	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTCAGAGATGAGGACACC	NA	False	NA	69	True	AATAAA	-28	NA	69675416	69671364	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_69671820_69673215_69673322_69675189
H1_mix_00014511	chr11	-	1821	3	FSM	ENSG00000162344.4	ENST00000294312.4	1821	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	6	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAGGTGCATTCTATTA	-1	True	NA	-6	True	ATTAAA	-17	NA	69704022	69698237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_69699577_69703260_69703365_69703644
H1_mix_00014512	chr11	-	3297	3	FSM	ENSG00000075388.4	ENST00000168712.3	3165	3	-126	-6	-126	6	multi-exon	FALSE	canonical	3	10	junction_2	1	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTGGTTCCCTCCCCCTG	NA	False	NA	2	True	ATTAAA	-31	NA	69775467	69771015	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_69773486_69774023_69774128_69774744
H1_mix_00014519	chr11	-	237	1	FSM	ENSG00000280089.1	ENST00000624943.1	464	1	256	-29	256	29	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATAAAGTGCCTGCTGCT	8158	False	NA	NA	False	NA	NA	NA	70705812	70705575	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_70705600_70705800
H1_mix_00014522	chr11	-	2647	9	FSM	ENSG00000172893.18	ENST00000355527.8	2627	9	0	-20	0	20	multi-exon	TRUE	canonical	3	859	junction_3	56.6700979353309	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGAATGGGCCTGACTCG	24	False	71448417	NA	False	ATTAAA	-39	NA	71448393	71434390	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_71435840_71437811_71437944_71438878_71439084_71441226_71441441_71442262_71442354_71443992_71444216_71444854_71444959_71447609_71447735_71448289
H1_mix_00014525	chr11	-	2667	9	FSM	ENSG00000172893.18	ENST00000683287.1	2695	9	28	0	7	0	multi-exon	FALSE	canonical	0	0	junction_5	330.690470833376	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAAATAAGTGGCTGTGT	10	False	NA	NA	False	ATTAAA	-9	NA	71448407	71434420	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_71435840_71437811_71437944_71438878_71439084_71441226_71441441_71442262_71442354_71443956_71444216_71444854_71444959_71447609_71447735_71448289
H1_mix_00014532	chr11	-	342	3	FSM	ENSG00000254972.1	ENST00000532530.1	347	3	0	5	0	-5	multi-exon	FALSE	canonical	0	0	junction_1	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACACCTGTGTGTTGCCTG	NA	False	NA	NA	False	GATAAA	-12	NA	71705404	71701272	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_71701486_71704176_71704261_71705359
H1_mix_00014535	chr11	-	2279	7	FSM	ENSG00000137497.19	ENST00000540626.5	2276	7	0	-3	0	3	multi-exon	FALSE	canonical	3	353	junction_6	38.8873015549064	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTTGACTTGATCGGTG	8240	False	NA	-3	True	AATAAA	-23	NA	72007916	72002860	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_72003539_72003886_72004100_72004224_72004342_72004639_72004817_72005232_72005370_72006034_72006264_72007188
H1_mix_00014537	chr11	-	7180	25	NIC	ENSG00000137497.19	novel	7227	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_24	91.7043483156606	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGAGTTGACTTGATCG	1011	False	72041153	-6	True	AATAAA	-20	NA	72041137	72002863	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_72003539_72003886_72004100_72004224_72004342_72004639_72004817_72005232_72005370_72006034_72006264_72007188_72007436_72008687_72008846_72008966_72009186_72009267_72009388_72010785_72010855_72012894_72016261_72016407_72016531_72017686_72017828_72018182_72018301_72018395_72018514_72018822_72018981_72019493_72019618_72021203_72021292_72022338_72022420_72023064_72023148_72024273_72024354_72029204_72029291_72035901_72035976_72040958
H1_mix_00014538	chr11	-	7248	26	NIC	ENSG00000137497.19	novel	7227	27	NA	NA	1	3	combination_of_known_junctions	TRUE	canonical	3	38	junction_25	95.378790095073	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTTGACTTGATCGGTG	22	True	NA	-3	True	AATAAA	-23	NA	72080493	72002860	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_72003539_72003886_72004100_72004224_72004342_72004639_72004817_72005232_72005370_72006034_72006264_72007188_72007436_72008687_72008846_72008966_72009186_72009267_72009388_72010785_72010855_72012894_72016261_72016407_72016531_72017686_72017828_72018182_72018301_72018395_72018514_72018822_72018981_72019493_72019618_72021203_72021292_72022338_72022420_72023064_72023148_72024273_72024354_72029204_72029291_72035901_72035976_72069841_72069912_72080319
H1_mix_00014555	chr11	-	883	6	FSM	ENSG00000110200.9	ENST00000543587.5	883	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	356.255526272927	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTATTCCCTATTTGTTG	-1	True	NA	-1	True	AATAAA	-25	NA	72112766	72109582	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_72109941_72110087_72110226_72110543_72110604_72111156_72111282_72111411_72111497_72112649
H1_mix_00014556	chr11	-	1776	6	FSM	ENSG00000110200.9	ENST00000538393.5	867	6	83	-992	0	220	multi-exon	FALSE	canonical	3	233	junction_4	258.699516814392	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGGGGGAGCTGGAGGTG	21	True	NA	NA	False	NA	NA	NA	72112686	72108597	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_72109929_72110087_72110226_72110543_72110604_72111156_72111282_72111411_72111497_72112649
H1_mix_00014557	chr11	-	854	6	FSM	ENSG00000110200.9	ENST00000535234.5	848	6	0	-6	0	0	multi-exon	FALSE	canonical	3	95	junction_4	310.824709442477	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTATTCCCTATTTGTTG	-9	True	NA	-1	True	AATAAA	-25	NA	72112774	72109582	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_72109929_72110087_72110226_72110543_72110604_72111156_72111287_72111441_72111497_72112649
H1_mix_00014558	chr11	-	1871	6	FSM	ENSG00000110200.9	ENST00000227618.9	801	6	-81	-989	-2	220	multi-exon	FALSE	canonical	3	515	junction_4	158.78287061267	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGGGGGAGCTGGAGGTG	-11	True	NA	NA	False	NA	NA	NA	72112776	72108597	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_72109929_72110087_72110226_72110543_72110604_72111156_72111287_72111411_72111497_72112649
H1_mix_00014559	chr11	-	1784	5	FSM	ENSG00000110200.9	ENST00000545944.5	704	5	-88	-992	0	220	multi-exon	FALSE	canonical	3	93	junction_4	347.917734529299	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGGGGGAGCTGGAGGTG	-9	True	NA	NA	False	NA	NA	NA	72112774	72108597	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_72109929_72110087_72110226_72110543_72110604_72111156_72111287_72112649
H1_mix_00014563	chr11	-	9966	16	FSM	ENSG00000162129.14	ENST00000538039.6	9963	16	0	-3	0	3	multi-exon	FALSE	canonical	3	50	junction_7	11.9825799485012	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGACAGCACTTTTAATT	-8	True	NA	NA	False	AATAAA	-18	NA	72434531	72285491	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_72293616_72294021_72294127_72294324_72294445_72294619_72294694_72295491_72295649_72301802_72301965_72302303_72302349_72307198_72307255_72308526_72308605_72317105_72317221_72329706_72329805_72358879_72359009_72380280_72380385_72402965_72403053_72430311_72430364_72434071
H1_mix_00014564	chr11	-	9833	17	FSM	ENSG00000162129.14	ENST00000294053.9	10053	17	3	217	3	-217	multi-exon	FALSE	canonical	0	0	junction_13	23.0467425843654	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTAAATACTTTTTAGT	-5	True	NA	NA	False	NA	NA	NA	72434528	72285711	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_72293616_72294021_72294127_72294324_72294445_72294619_72294694_72295491_72295649_72301802_72301965_72302303_72302349_72307198_72307255_72308526_72308605_72317105_72317221_72329706_72329805_72358879_72359009_72372924_72373015_72380280_72380385_72402965_72403053_72430311_72430364_72434071
H1_mix_00014565	chr11	-	409	5	FSM	ENSG00000186642.16	ENST00000536918.1	531	5	122	0	122	0	multi-exon	FALSE	canonical	3	12	junction_2	2.1650635094611	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCAACCGTGAGCACTGG	7294	False	NA	NA	False	NA	NA	NA	72579383	72577544	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_72577595_72578232_72578340_72578475_72578515_72578896_72579010_72579283
H1_mix_00014566	chr11	-	605	7	FSM	ENSG00000186642.16	ENST00000420501.5	1027	7	422	0	422	0	multi-exon	FALSE	canonical	3	11	junction_2	3.18416219575713	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAAGATCGCGGTAGGTG	8487	False	NA	NA	False	NA	NA	NA	72581947	72578909	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_72579010_72579283_72579384_72579533_72579609_72580576_72580625_72580885_72580974_72581356_72581480_72581876
H1_mix_00014568	chr11	-	928	10	FSM	ENSG00000186642.16	ENST00000475807.6	1009	10	70	11	70	-11	multi-exon	FALSE	canonical	1	4	junction_3	2.16024689946929	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGAACCAGGGTGCGCGTG	-1	True	NA	NA	False	NA	NA	NA	72590349	72584561	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_72584729_72584871_72584945_72585370_72585435_72585553_72585594_72586069_72586182_72588783_72588915_72589174_72589241_72589750_72589793_72589906_72589982_72590191
H1_mix_00014571	chr11	-	5099	34	NNC	ENSG00000186635.15	novel	5156	35	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_6	61.4007295296795	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCTGAGGCCTGTGATT	18	True	NA	-3	True	TATAAA	-23	NA	72752388	72685068	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_72685682_72686041_72686192_72687438_72687503_72687687_72687739_72688454_72688538_72693324_72693467_72693691_72693806_72694979_72695098_72695386_72695456_72695541_72695629_72695717_72695866_72696548_72696655_72696982_72697196_72697322_72697487_72697597_72697650_72697910_72698107_72699004_72699108_72699416_72699553_72701648_72701784_72702904_72703080_72704151_72704335_72705804_72705891_72707174_72707375_72709869_72709977_72710384_72710588_72711020_72711142_72711429_72711500_72712195_72712340_72712437_72712569_72713175_72713244_72714151_72714322_72726619_72727173_72732514_72732598_72752327
H1_mix_00014577	chr11	-	1212	6	NIC	ENSG00000214530.10	novel	1100	7	NA	NA	2	3	intron_retention	FALSE	canonical	3	30	junction_2	48.0932427686052	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCATCACTGTGCCTGCT	10	True	NA	-14	True	AATAAA	-20	NA	72781833	72754725	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_72755143_72755700_72755754_72758529_72758634_72759233_72759382_72780974_72781295_72781663
H1_mix_00014580	chr11	-	1100	7	FSM	ENSG00000214530.10	ENST00000537947.5	1100	7	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_3	12.0784472879956	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGCAGCATGCGGACTCA	-4	True	NA	NA	False	NA	NA	NA	72781893	72755015	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_72755143_72755700_72755754_72757766_72757885_72758529_72758634_72759233_72759382_72780974_72781295_72781663
H1_mix_00014581	chr11	-	5113	20	FSM	ENSG00000137478.15	ENST00000409418.9	4710	20	-386	-17	-386	17	multi-exon	FALSE	canonical	3	38	junction_4	9.33494907528837	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAGAAAGGTTTGGGTAAA	NA	False	NA	12	True	AATAAA	-31	NA	73142704	72836727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_72838875_72840876_72840960_72841453_72841584_72842620_72842842_72843150_72843329_72843448_72843533_72849754_72849890_72867864_72868027_72887469_72887575_72889828_72889946_72902542_72902639_72921827_72921951_72984087_72984217_72985061_72985117_72988963_72989098_73000989_73001135_73015808_73015886_73083694_73083741_73140030_73140129_73141856
H1_mix_00014583	chr11	-	6887	9	NNC	ENSG00000054965.11	novel	7296	9	NA	NA	0	42032	intron_retention	TRUE	non_canonical	0	0	junction_1	6.06088896120033	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGCGGACCTTTGGGAGG	23	True	NA	NA	False	NA	NA	NA	73598098	73358454	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_73358469_73400791_73406745_73407512_73407644_73409486_73409662_73411393_73411537_73419873_73420000_73430689_73430771_73468404_73468493_73597922
H1_mix_00014585	chr11	-	3327	8	FSM	ENSG00000175582.20	ENST00000336083.8	3326	8	0	-1	0	1	multi-exon	FALSE	canonical	3	214	junction_5	141.451369013942	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGACCTGGTTTCCCATT	31	True	NA	NA	False	AATAAA	-18	NA	73761074	73675636	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_73677963_73679653_73679721_73707419_73707514_73716250_73716363_73718612_73718719_73720845_73720900_73730764_73730824_73760565
H1_mix_00014586	chr11	-	3392	8	FSM	ENSG00000175582.20	ENST00000310653.10	3389	8	0	-3	0	3	multi-exon	FALSE	canonical	3	332	junction_5	91.794357569693	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACCTGGTTTCCCATTCC	-32	True	NA	NA	False	AATAAA	-20	NA	73761137	73675634	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_73677963_73679653_73679721_73707419_73707514_73716250_73716363_73718784_73718891_73720845_73720900_73730764_73730824_73760565
H1_mix_00014588	chr11	-	929	2	FSM	ENSG00000181924.7	ENST00000545127.1	922	2	0	-7	0	5	multi-exon	FALSE	canonical	3	59	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTTTGTTTTTTTGAG	171	False	NA	1	True	AATAAA	-27	NA	73876674	73872661	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_73873395_73876478
H1_mix_00014589	chr11	-	823	2	FSM	ENSG00000181924.7	ENST00000355693.5	818	2	0	-5	0	5	multi-exon	FALSE	canonical	3	854	junction_1	0	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTTTGTTTTTTTGAG	-1	True	NA	1	True	AATAAA	-27	NA	73876846	73872661	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_73873395_73876756
H1_mix_00014594	chr11	-	7937	33	FSM	ENSG00000168014.18	ENST00000334126.12	7939	33	2	0	0	0	multi-exon	TRUE	canonical	3	38	junction_21	11.0607343223676	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGCACAAGTGTTTCGC	-5	True	NA	-7	True	AATAAA	-20	NA	74171000	74012717	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_74013526_74028286_74028399_74033350_74034279_74037477_74037699_74042053_74042219_74048204_74048339_74049336_74049543_74054606_74054672_74057405_74057545_74074252_74074601_74078114_74078718_74084880_74084971_74085617_74085887_74090812_74090937_74092415_74092589_74093815_74094000_74095227_74095409_74098008_74098256_74100524_74100677_74103130_74103626_74106370_74106494_74109033_74109153_74113779_74113893_74114383_74114594_74118227_74118383_74122987_74123136_74132843_74132973_74133424_74133558_74138719_74138968_74139604_74139829_74161398_74161557_74168343_74168614_74170737
H1_mix_00014595	chr11	-	6265	31	FSM	ENSG00000168014.18	ENST00000313663.11	6283	31	10	8	-7	0	multi-exon	FALSE	canonical	0	0	junction_1	14.7604953244199	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGCCTTGAATATAGTCTCA	201	False	NA	NA	False	AATAAA	-16	NA	74171009	74034441	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_74034609_74037477_74037699_74042053_74042219_74048204_74048339_74049336_74049543_74054606_74054672_74057405_74057545_74074252_74074601_74078114_74078718_74084880_74084971_74085617_74085887_74090812_74090937_74092415_74092589_74093815_74094000_74095227_74095409_74098008_74098256_74100524_74100677_74103130_74103626_74106370_74106494_74109033_74109153_74113779_74113893_74114383_74114594_74118227_74118383_74122987_74123136_74132843_74132973_74133424_74133558_74138719_74138968_74139604_74139829_74161398_74161557_74168343_74168614_74170737
H1_mix_00014598	chr11	-	8483	14	FSM	ENSG00000165434.8	ENST00000298198.5	8477	14	0	-6	0	6	multi-exon	TRUE	canonical	3	89	junction_6	15.2358188987265	518	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTGTAATTTTTATTT	-11	True	NA	0	True	AATAAA	-23	NA	74398433	74330309	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_74336755_74338467_74338602_74342460_74342651_74342884_74343015_74343322_74343417_74345468_74345650_74346731_74346830_74347147_74347338_74351382_74351577_74368491_74368576_74370901_74370987_74371710_74371818_74374414_74374583_74398050
H1_mix_00014599	chr11	-	2897	3	FSM	ENSG00000175538.11	ENST00000310128.9	3064	3	-59	226	-58	-226	multi-exon	FALSE	canonical	2	3	junction_1	2	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGGATCATGGAACACAT	NA	False	NA	-13	True	AATAAA	-25	NA	74467608	74455066	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_74457604_74461954_74462104_74467397
H1_mix_00014600	chr11	-	2402	2	FSM	ENSG00000175536.7	ENST00000527115.1	769	2	-409	-1224	0	31	multi-exon	FALSE	canonical	2	5	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCATGCTGAGTCTT	-11	True	NA	NA	False	TATAAA	-36	NA	74493724	74490487	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_74492365_74493199
H1_mix_00014601	chr11	-	2333	2	FSM	ENSG00000175536.7	ENST00000310109.5	2333	2	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATGTTTTCTTGAGAT	-11	True	NA	NA	False	TATAAA	-19	NA	74493724	74490518	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_74492365_74493237
H1_mix_00014602	chr11	-	399	1	FSM	ENSG00000227615.1	ENST00000428553.1	399	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATAAATCTTTGGCTCA	8747	False	NA	NA	False	AAGAAA	-4	NA	74746114	74745715	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_74745700_74746100
H1_mix_00014604	chr11	-	7327	15	FSM	ENSG00000137486.17_ENSG00000279117.1	ENST00000360025.7	1895	15	45	-5477	0	0	multi-exon	FALSE	canonical	3	51	junction_6	7.75024686901083	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGCTGTGCTTTCATTT	0	True	NA	0	True	AATAAA	-35	NA	75351660	75260121	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_75266275_75267651_75267704_75268888_75268960_75272894_75272979_75274073_75274212_75276838_75276912_75277363_75277449_75278608_75278745_75281074_75281143_75281961_75282022_75283286_75283484_75284234_75284280_75287314_75287376_75290008_75290040_75351587
H1_mix_00014605	chr11	-	7919	16	FSM	ENSG00000137486.17	ENST00000420843.7	7352	16	-567	0	-523	0	multi-exon	FALSE	canonical	3	10	junction_3	20.2282530689682	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGCTGTGCTTTCATTT	22	False	NA	0	True	AATAAA	-35	NA	75352228	75260121	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_75266275_75267651_75267704_75268888_75268960_75271700_75271725_75272894_75272979_75274073_75274212_75276838_75276912_75277363_75277449_75278608_75278745_75281074_75281143_75281961_75282022_75283286_75283484_75284234_75284280_75287314_75287376_75290008_75290040_75351587
H1_mix_00014607	chr11	-	3213	18	FSM	ENSG00000158555.15	ENST00000529721.5	3222	18	9	0	9	0	multi-exon	FALSE	canonical	3	13	junction_17	6.56086752639938	145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTTGTCTCTGAATTG	16	False	NA	-4	True	ATTAAA	-14	NA	75490742	75434639	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_75435656_75436935_75437049_75439878_75439962_75441162_75441311_75441645_75441804_75442362_75442582_75443135_75443287_75444412_75444496_75448976_75449123_75449516_75449611_75449884_75449984_75456756_75456817_75457692_75457787_75462785_75462890_75477618_75477796_75479243_75479489_75490236_75490321_75490603
H1_mix_00014610	chr11	-	3234	4	FSM	ENSG00000171533.12	ENST00000304771.8	3252	4	18	0	18	0	multi-exon	FALSE	canonical	3	9	junction_1	4.02768199119819	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAATGTTTCTCTCTGTCTC	161	False	NA	NA	False	AATAAA	-19	NA	75669020	75586917	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_75588185_75605807_75606005_75608108_75608323_75667464
H1_mix_00014612	chr11	-	3706	2	FSM	ENSG00000137492.9	ENST00000529901.1	6795	2	3089	0	3089	0	multi-exon	FALSE	canonical	3	218	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTAGGCACATTATTTTTT	NA	False	NA	-14	True	AATAAA	-19	NA	76356484	76349955	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_76352795_76355617
H1_mix_00014613	chr11	-	3490	5	FSM	ENSG00000137492.9	ENST00000260045.8	3490	5	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_3	11.7340317027013	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTAGGCACATTATTTTTT	-36	True	NA	-14	True	AATAAA	-19	NA	76381132	76349955	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_76352795_76355617_76355655_76360955_76361064_76365851_76365973_76380747
H1_mix_00014615	chr11	-	719	2	FSM	ENSG00000255135.5	ENST00000663202.2	719	2	3	-3	3	-1	multi-exon	FALSE	canonical	3	342	junction_1	0	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCCTTTGCTGGATTTAC	-13	True	NA	NA	False	AATAAA	-28	NA	76444687	76441330	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_76441640_76444277
H1_mix_00014618	chr11	-	3556	15	NIC	ENSG00000149269.10	novel	3459	15	NA	NA	1	470	combination_of_known_junctions	FALSE	canonical	3	322	junction_14	106.156507486035	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTTGTGCCTGTTATTG	-2	True	NA	NA	False	AATAAA	-19	NA	77411943	77321546	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_77323361_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77411773
H1_mix_00014619	chr11	-	3635	15	NIC	ENSG00000149269.10	novel	3001	15	NA	NA	39	470	combination_of_known_splicesites	FALSE	canonical	3	46	junction_14	170.6101296129	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTTGTGCCTGTTATTG	1	True	NA	NA	False	AATAAA	-19	NA	77412025	77321546	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_77323361_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392539_77411773
H1_mix_00014620	chr11	-	3693	16	NNC	ENSG00000149269.10	novel	2543	16	NA	NA	39	470	at_least_one_novel_splicesite	TRUE	canonical	3	17	junction_10	235.941480503582	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTTGTGCCTGTTATTG	1	True	NA	NA	False	AATAAA	-19	NA	77412025	77321546	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_77323361_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77356506_77356562_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77411773
H1_mix_00014621	chr11	-	3895	15	FSM	ENSG00000149269.10	ENST00000356341.8	3459	15	34	-470	0	470	multi-exon	FALSE	canonical	3	240	junction_14	124.555044794153	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTTGTGCCTGTTATTG	-2	True	NA	NA	False	AATAAA	-19	NA	77474060	77321546	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_77323361_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77473551
H1_mix_00014622	chr11	-	2543	16	FSM	ENSG00000149269.10	ENST00000278568.8	2543	16	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	225.910503420172	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACAATTAATTCTTGACT	-2	True	NA	6	True	NA	NA	NA	77474060	77322947	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_77323361_77325327_77325377_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77473551
H1_mix_00014628	chr11	-	11255	16	FSM	ENSG00000048649.14	ENST00000308488.11	11242	16	0	-13	0	13	multi-exon	FALSE	canonical	3	94	junction_10	18.0830184304379	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTGCAAACTTAGCTT	6	True	NA	1	True	AATAAA	-28	NA	77820722	77659995	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_77667492_77672041_77672231_77675035_77675257_77676791_77677000_77678085_77678154_77683709_77683820_77685104_77685160_77691158_77691239_77693506_77693612_77698486_77698694_77700720_77702496_77725544_77725700_77740730_77740937_77747035_77747129_77764597_77764690_77820527
H1_mix_00014629	chr11	-	904	1	FSM	ENSG00000227376.1	ENST00000435241.1	552	1	-192	-160	-192	160	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCCCCAAAAAAAGTAATAA	5652	False	NA	NA	False	AAGAAA	-11	NA	77735218	77734314	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_77734300_77735200
H1_mix_00014630	chr11	-	3099	2	FSM	ENSG00000048649.14	ENST00000467567.1	2982	2	-146	29	-146	-29	multi-exon	FALSE	canonical	3	151	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGCAACATGGCAAAATCC	-3	True	NA	NA	False	NA	NA	NA	77821015	77762078	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_77764690_77820527
H1_mix_00014633	chr11	-	3282	24	NIC	ENSG00000149262.17	novel	3146	23	NA	NA	15	-2	combination_of_known_junctions	TRUE	canonical	2	4	junction_21	41.3090157545383	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCTGTTCTAGTTCCTG	219	False	NA	-5	True	AATAAA	-13	NA	77994638	77878723	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_77879128_77883831_77883953_77891318_77891463_77891680_77891841_77894289_77894350_77901420_77901552_77903539_77903621_77907716_77907811_77918820_77918979_77921339_77921474_77922355_77922472_77924749_77924893_77928341_77928548_77938650_77938826_77941179_77941252_77955941_77956063_77958745_77958835_77960340_77960392_77960952_77961139_77978995_77979103_77981458_77981577_77987528_77987699_77991107_77991300_77994589
H1_mix_00014635	chr11	-	630	4	FSM	ENSG00000149262.17	ENST00000525931.1	633	4	0	3	0	-3	multi-exon	FALSE	canonical	1	1	junction_1	67.9607729993315	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCCTCTGTGCTTAGGAT	NA	False	NA	NA	False	NA	NA	NA	77938771	77922355	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_77922472_77924705_77924893_77928341_77928548_77938650
H1_mix_00014636	chr11	-	556	4	FSM	ENSG00000149262.17	ENST00000524766.5	556	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	75.9356452677017	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTTGCAATTTAAAAGC	5	True	NA	NA	False	AATGAA	-2	NA	77994665	77981458	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_77981577_77987528_77987699_77991107_77991300_77994589
H1_mix_00014638	chr11	-	1674	2	FSM	ENSG00000151364.17	ENST00000353172.6	1673	2	0	-1	0	1	multi-exon	FALSE	canonical	3	170	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCAGTTTTGGTTCTGCTT	-27	True	NA	-4	True	AATAAA	-16	NA	78023276	78015713	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_78017271_78023159
H1_mix_00014639	chr11	-	2168	3	FSM	ENSG00000151366.13	ENST00000281031.5	2168	3	0	0	0	0	multi-exon	FALSE	canonical	3	3673	junction_1	265	346	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTGTTGATCTCATCAG	-6	True	NA	1	True	AATAAA	-19	NA	78079862	78068296	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_78070037_78072997_78073142_78079578
H1_mix_00014641	chr11	-	1935	13	FSM	ENSG00000159063.14	ENST00000299626.10	1637	13	7	-305	0	291	multi-exon	FALSE	canonical	3	590	junction_9	46.088682631061	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGTGAGGATATAAAGCAT	-8	True	NA	NA	False	NA	NA	NA	78139619	78100640	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
H1_mix_00014642	chr11	-	2744	13	FSM	ENSG00000159063.14	ENST00000530910.6	2053	13	-386	-305	0	291	multi-exon	FALSE	canonical	3	44	junction_12	184.665012026281	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGTGAGGATATAAAGCAT	NA	False	NA	NA	False	NA	NA	NA	78139644	78100640	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78138709
H1_mix_00014643	chr11	-	1688	14	FSM	ENSG00000159063.14	ENST00000376156.7	1677	14	0	-11	0	0	multi-exon	FALSE	canonical	3	48	junction_2	233.976127847195	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTATTTCATGGGAAAT	19	True	NA	-6	True	AATAAA	-24	NA	78139592	78100935	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_78101196_78102873_78102949_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
H1_mix_00014644	chr11	-	1609	13	FSM	ENSG00000159063.14	ENST00000680761.1	1605	13	0	-4	0	0	multi-exon	FALSE	canonical	3	10	junction_12	193.792343043326	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTCATGGGAAATTAAC	-8	True	NA	-2	True	AATAAA	-28	NA	78139619	78100931	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139528
H1_mix_00014645	chr11	-	1663	13	FSM	ENSG00000159063.14	ENST00000526737.6	1653	13	0	-10	0	0	multi-exon	FALSE	canonical	3	29	junction_10	188.883929673461	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTATTTCATGGGAAAT	NA	False	NA	-6	True	AATAAA	-24	NA	78139646	78100935	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124024_78124215_78127357_78127437_78139493
H1_mix_00014646	chr11	-	1647	13	FSM	ENSG00000159063.14	ENST00000680866.1	1637	13	0	-10	0	0	multi-exon	FALSE	canonical	3	24	junction_4	191.189460280169	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTATTTCATGGGAAAT	NA	False	NA	-6	True	AATAAA	-24	NA	78139660	78100935	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106913_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
H1_mix_00014647	chr11	-	2442	14	FSM	ENSG00000159063.14	ENST00000680996.1	2442	14	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	299.715802269713	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGGAACTGCTTAGATA	-13	True	NA	-34	True	AAGAAA	-7	NA	78139624	78100963	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_78101196_78102873_78102949_78103979_78104053_78104355_78104454_78106806_78106913_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78138709
H1_mix_00014649	chr11	-	6107	10	FSM	ENSG00000033327.13	ENST00000361507.5	6110	10	3	0	3	0	multi-exon	FALSE	canonical	3	21	junction_7	2.9606472432165	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTGCCGTGTCCATCTT	0	True	NA	-4	True	AATAAA	-25	NA	78417817	78215292	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_78219416_78220318_78220445_78221676_78221780_78222104_78222196_78223411_78223677_78225107_78225203_78226464_78227052_78250156_78250401_78280600_78280902_78417645
H1_mix_00014655	chr11	-	3748	9	FSM	ENSG00000137509.12	ENST00000313010.8	3489	9	-89	-170	-39	170	multi-exon	FALSE	canonical	3	341	junction_2	19.4899814007094	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCCAGAGGAGCCAGTGT	1171	False	NA	NA	False	ACTAAA	-45	NA	82900519	82822765	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_82825123_82838386_82838575_82839260_82839426_82849048_82849219_82849913_82850072_82850323_82850506_82853176_82853279_82859976_82860118_82900234
H1_mix_00014657	chr11	-	9857	5	FSM	ENSG00000137502.10	ENST00000527633.6	9859	5	2	0	1	0	multi-exon	FALSE	canonical	3	25	junction_4	4.15331193145904	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAGAATCATATGCCAT	24	False	83071919	NA	False	AATAAA	-19	NA	83071895	82973132	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_82982416_82987586_82987771_82994038_82994123_82997223_82997325_83071690
H1_mix_00014659	chr11	-	402	3	FSM	ENSG00000247137.9	ENST00000528524.5	549	3	147	0	-5	0	multi-exon	FALSE	canonical	2	8	junction_1	1	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATATGTAGTAGATAAATT	2	True	NA	1	True	NA	NA	NA	83193647	83191028	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_83191169_83192735_83192817_83193466
H1_mix_00014662	chr11	-	1992	9	FSM	ENSG00000137500.10	ENST00000529611.5	1986	9	0	-6	0	0	multi-exon	FALSE	canonical	3	136	junction_8	291.294953612314	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGTGGGTTTTCAAAGT	1	True	NA	-21	True	TATAAA	-22	NA	83285998	83261455	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83278725_83278830_83280140_83280261_83285126
H1_mix_00014663	chr11	-	1919	9	FSM	ENSG00000137500.10	ENST00000525503.5	1919	9	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_8	227.739674573843	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGTGGGTTTTCAAAGT	-1	True	NA	-21	True	TATAAA	-22	NA	83286351	83261455	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83278725_83278830_83280140_83280261_83285552
H1_mix_00014664	chr11	-	1053	8	FSM	ENSG00000137500.10	ENST00000529745.5	1053	8	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_6	281.720443282459	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACTGTGTCTTTATTGTG	175	False	NA	-20	True	ACTAAA	-27	NA	83286210	83261756	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83280140_83280261_83285872
H1_mix_00014666	chr11	-	496	5	FSM	ENSG00000150672.18	ENST00000457267.5	496	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	6.60965203320114	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAGCCAAGAAAACCTAT	NA	False	NA	NA	False	AATACA	-44	NA	83484213	83462067	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_83462094_83466707_83466818_83469200_83469374_83471625_83471728_83484128
H1_mix_00014667	chr11	-	566	5	FSM	ENSG00000150672.18	ENST00000530800.5	566	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	5.97390157267426	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAAATTTGGGGGCAGTT	473	False	NA	NA	False	NA	NA	NA	83724956	83486154	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_83486252_83532707_83532784_83541681_83541859_83633210_83633326_83724855
H1_mix_00014668	chr11	-	7140	1	FSM	ENSG00000137504.15	ENST00000527447.2	7140	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATATATATTTTTCTGT	-22	True	NA	-4	True	AATAAA	-26	NA	85665129	85657989	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_85658000_85665100
H1_mix_00014669	chr11	-	4424	3	FSM	ENSG00000137504.15	ENST00000528561.5	1099	3	-1025	-2300	0	-107	multi-exon	FALSE	canonical	3	120	junction_1	104	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAACATTTTGGCATGCT	-22	True	NA	NA	False	AAGAAA	-44	NA	85665129	85657848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_85660598_85662388_85662458_85663523
H1_mix_00014671	chr11	-	4110	3	NIC	ENSG00000137504.15	novel	2850	4	NA	NA	0	-6	intron_retention	FALSE	canonical	3	320	junction_2	4	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAACTCTGGATTGTTTT	5	True	NA	-11	True	AAAACA	-2	NA	85665102	85659713	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_85662458_85663523_85663602_85663814
H1_mix_00014672	chr11	-	898	5	FSM	ENSG00000137504.15	ENST00000527529.6	898	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	152.076255543066	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTTTCATGGGAGTGA	918	False	NA	NA	False	AATAGA	-44	NA	85664189	85660334	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_85660598_85661636_85661750_85662388_85662458_85663523_85663602_85663814
H1_mix_00014674	chr11	-	4135	20	FSM	ENSG00000073921.18	ENST00000393346.8	4134	20	0	-1	0	1	multi-exon	TRUE	canonical	3	35	junction_3	44.7789894340732	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAAGTTGTACTTTTATA	-3	True	NA	28	True	ATTAAA	-17	NA	86069084	85957173	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_85959061_85974707_85974813_85976622_85976683_85981128_85981229_85981744_85981776_85981871_85982004_85983865_85983974_85990249_85990400_85996825_85996930_86000642_86000780_86001034_86001159_86003365_86003452_86007541_86007584_86011029_86011137_86012280_86012393_86014869_86014964_86022366_86022470_86026291_86026368_86031468_86031612_86068650
H1_mix_00014675	chr11	-	3966	20	NIC	ENSG00000073921.18	novel	3474	20	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_7	27.1939784763826	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGAAGTTGTACTTTTAT	24	True	NA	27	True	ATTAAA	-16	NA	86069057	85957174	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_85959061_85974707_85974813_85976622_85976683_85978069_85978094_85981128_85981229_85981744_85981776_85981871_85981989_85983865_85983974_85996825_85996930_86000642_86000780_86001034_86001159_86003365_86003452_86007541_86007584_86011029_86011137_86012280_86012393_86014869_86014964_86022366_86022470_86026291_86026368_86031468_86031612_86068650
H1_mix_00014678	chr11	-	3474	20	FSM	ENSG00000073921.18	ENST00000532317.5	3474	20	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_4	25.0165596125376	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTATGGTATTCTGG	22	True	NA	-21	True	AATAAA	-18	NA	86069059	85957683	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_85959061_85974707_85974813_85976622_85976683_85978069_85978094_85981128_85981229_85981744_85981776_85981871_85982004_85983865_85983974_85996825_85996930_86000642_86000780_86001034_86001159_86003365_86003452_86007541_86007584_86011029_86011137_86012280_86012393_86014869_86014964_86022366_86022470_86026291_86026368_86031468_86031612_86068650
H1_mix_00014679	chr11	-	240	2	FSM	ENSG00000151376.18	ENST00000526944.1	487	2	247	0	6	0	multi-exon	FALSE	canonical	2	4	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGGGCCAGAGGGCAGG	-3	True	NA	NA	False	NA	NA	NA	86672366	86671761	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_86671959_86672323
H1_mix_00014680	chr11	-	3808	2	Fusion	ENSG00000255471.1_ENSG00000174804.4	novel	239	2	NA	NA	14	3050	multi-exon	FALSE	canonical	3	27	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTTGTTGTTTTCTTAG	594	False	NA	-7	True	AATAAA	-7	NA	86955381	86918871	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr11_-_86922099_86954800
H1_mix_00014681	chr11	-	7400	2	FSM	ENSG00000174804.4	ENST00000531380.2	7387	2	0	-13	0	13	multi-exon	FALSE	canonical	3	37	junction_1	0	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCATATTTCTGAAAGTA	1	True	NA	2	True	AATAAA	-27	NA	86955395	86945665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_86952471_86954800
H1_mix_00014682	chr11	-	646	1	FSM	ENSG00000254582.1	ENST00000526365.1	646	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGTTTAGTTCATCCAAC	NA	False	NA	NA	False	AATGAA	-11	NA	87330052	87329406	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_87329400_87330100
H1_mix_00014683	chr11	-	1432	3	FSM	ENSG00000123892.12	ENST00000243662.11	1432	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	17	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGAAAGTGCTTTAAGT	29	True	NA	-13	True	AATAAA	-25	NA	88175443	88113250	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_88114141_88149674_88149956_88175182
H1_mix_00014684	chr11	-	6119	6	FSM	ENSG00000109861.17	ENST00000533897.2	6119	6	0	0	0	0	multi-exon	FALSE	canonical	3	1412	junction_2	190.097238275573	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGAGTTTATGTTTACT	421	False	NA	-6	True	AATAAA	-19	NA	88337720	88293591	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_88294509_88296132_88300646_88309162_88309319_88312387_88312555_88334936_88335083_88337500
H1_mix_00014686	chr11	-	1828	7	FSM	ENSG00000109861.17	ENST00000676612.1	1828	7	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_6	565.648718041703	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGAGTTTATGTTTACT	-2	True	NA	-6	True	AATAAA	-19	NA	88337740	88293591	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_88294509_88296132_88296265_88300529_88300646_88309162_88309319_88312387_88312555_88334936_88335083_88337546
H1_mix_00014687	chr11	-	1607	6	FSM	ENSG00000109861.17	ENST00000678520.1	1607	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	764.533740262652	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTATGGAGTTTATGTTT	463	False	NA	-9	True	AATAAA	-16	NA	88337678	88293594	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_88294509_88296132_88296265_88300529_88300646_88312387_88312555_88334936_88335083_88337546
H1_mix_00014689	chr11	-	6147	4	FSM	ENSG00000109861.17	ENST00000524463.6	6144	4	0	-3	0	3	multi-exon	FALSE	canonical	3	49	junction_1	873.209533210036	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTATTGTTTTATTGAT	-12	True	NA	NA	False	AATAAA	-36	NA	88337780	88320807	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_88326444_88328111_88328197_88334936_88335083_88337500
H1_mix_00014690	chr11	-	726	3	FSM	ENSG00000109861.17	ENST00000677976.1	724	3	0	-2	0	0	multi-exon	FALSE	canonical	3	115	junction_1	903.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGTTCTTTTTCTCTTTT	419	False	NA	-21	True	AATAAA	-18	NA	88337722	88326085	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_88326444_88334936_88335083_88337500
H1_mix_00014691	chr11	-	902	5	FSM	ENSG00000109861.17	ENST00000393301.5	900	5	0	-2	0	0	multi-exon	FALSE	canonical	3	38	junction_1	807.838280536395	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGTTCTTTTTCTCTTTT	416	False	NA	-21	True	AATAAA	-18	NA	88337725	88326085	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_88326444_88327928_88328017_88328111_88328197_88334936_88335083_88337500
H1_mix_00014692	chr11	-	7565	3	FSM	ENSG00000109861.17	ENST00000533865.6	7564	3	0	-1	0	0	multi-exon	FALSE	canonical	3	49	junction_1	936.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGTTCTTTTTCTCTTTT	2	True	NA	-21	True	AATAAA	-18	NA	88337736	88326085	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_88326444_88328111_88335083_88337500
H1_mix_00014693	chr11	-	4257	18	FSM	ENSG00000086991.13	ENST00000263317.9	4269	18	0	12	0	-9	multi-exon	FALSE	canonical	1	1	junction_16	4.21399875025231	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAATTGAAATGGTGTCC	-8	True	NA	NA	False	AATAAA	-3	NA	89491375	89324364	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_89326877_89335844_89335946_89337446_89337516_89340062_89340172_89342073_89342194_89354961_89355044_89373431_89373493_89400016_89400080_89400214_89400380_89402325_89402543_89421901_89421983_89432783_89432857_89440687_89440716_89444134_89444233_89449439_89449525_89451784_89451896_89490457_89490554_89491189
H1_mix_00014695	chr11	-	4742	5	ISM	ENSG00000110172.12	ENST00000529987.5	1698	6	2978	-1759	1691	744	3prime_fragment	FALSE	canonical	3	527	junction_3	24.3451740597598	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTATTTTTTTT	5546	False	NA	NA	False	AGTAAA	-3	NA	90207787	90199684	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_90202552_90202812_90202876_90203307_90203428_90205459_90205566_90206201
H1_mix_00014696	chr11	-	4267	6	ISM	ENSG00000110172.12	ENST00000525317.5	1136	12	15243	-2722	1691	744	3prime_fragment	FALSE	canonical	3	81	junction_5	195.118835584881	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTATTTTTTTT	5546	False	NA	NA	False	AGTAAA	-3	NA	90207787	90199684	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_90202552_90202812_90202876_90203307_90203428_90205459_90205566_90206201_90206273_90206747
H1_mix_00014697	chr11	-	3158	4	FSM	ENSG00000110172.12	ENST00000529726.1	4805	4	1647	0	1647	0	multi-exon	FALSE	canonical	3	527	junction_3	21.4527905462721	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTTTTCTATGTGGGAT	5502	False	NA	68	True	NA	NA	NA	90207831	90201948	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_90202552_90202812_90202876_90203307_90203428_90205459
H1_mix_00014698	chr11	-	3938	12	FSM	ENSG00000110172.12	ENST00000525317.5	1136	12	-80	-2722	-33	744	multi-exon	FALSE	canonical	3	44	junction_6	182.457467023762	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTATTTTTTTT	189	False	NA	NA	False	AGTAAA	-3	NA	90223110	90199684	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_90202552_90202812_90202876_90203307_90203428_90205459_90205566_90206201_90206273_90206747_90206811_90210535_90210595_90211214_90211319_90214017_90214176_90215173_90215231_90218134_90218185_90222890
H1_mix_00014699	chr11	-	6056	11	FSM	ENSG00000180773.15	ENST00000326402.9	6037	11	0	-19	0	19	multi-exon	FALSE	canonical	3	267	junction_1	29.6359578890239	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTAAGGTTAAATGACA	-22	True	NA	14	True	AATAAA	-34	NA	93197991	93144154	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_93148845_93154107_93154278_93162705_93162876_93165917_93166017_93167943_93168172_93180796_93180882_93181690_93181787_93182805_93182895_93184429_93184521_93185690_93185815_93197777
H1_mix_00014702	chr11	-	961	3	NIC	ENSG00000166002.7	novel	987	3	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_1	184.5	3651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGATGCTTATCATGTTTT	12	True	NA	-11	True	AATAAA	-19	NA	93543350	93478471	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_93479285_93499275_93499349_93543275
H1_mix_00014703	chr11	-	992	3	FSM	ENSG00000166002.7	ENST00000298966.7	987	3	0	-5	0	5	multi-exon	FALSE	canonical	3	415	junction_1	6	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTATCATGTTTTGCAAG	-1	True	NA	-6	True	AATAAA	-24	NA	93543391	93478466	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_93479270_93499275_93499349_93543275
H1_mix_00014704	chr11	-	656	5	FSM	ENSG00000166012.17	ENST00000534079.5	656	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	174.821873631419	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTACTTCATGCTTGAAA	8989	False	NA	-10	True	AATAAA	-16	NA	93732501	93730199	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_93730448_93730676_93730713_93731149_93731217_93731752_93731800_93732243
H1_mix_00014705	chr11	-	2022	7	FSM	ENSG00000166012.17	ENST00000525928.5	1710	7	-301	-11	276	0	multi-exon	FALSE	canonical	0	0	junction_2	149.639566960079	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGCATGTATTTTTGGC	6528	False	NA	-27	True	ATTAAA	-24	NA	93734962	93730271	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_93730448_93730676_93730713_93731149_93731217_93731752_93731800_93732243_93732292_93733086_93733122_93733349
H1_mix_00014706	chr11	-	4368	4	FSM	ENSG00000166012.17	ENST00000530769.5	4358	4	0	-10	0	0	multi-exon	FALSE	canonical	3	359	junction_1	30.8220700148449	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGCATGTATTTTTGGC	5642	False	NA	-27	True	ATTAAA	-24	NA	93735848	93730271	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_93730448_93730676_93731217_93731752_93731800_93732243
H1_mix_00014707	chr11	-	765	9	NIC	ENSG00000166012.17	novel	1728	9	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	168.882355502284	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCAGCATGTATTTTTGG	1	True	NA	-28	True	ATTAAA	-23	NA	93735235	93730272	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_93730448_93730676_93730713_93731149_93731217_93731752_93731800_93732243_93732292_93733086_93733122_93733349_93733398_93734624_93734661_93734962
H1_mix_00014708	chr11	-	1556	14	NIC	ENSG00000166012.17	novel	1735	14	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	128.910821888622	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCAGCATGTATTTTTGG	11	True	NA	-28	True	ATTAAA	-23	NA	93741479	93730272	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_93730448_93730676_93730713_93731149_93731217_93731752_93731800_93732243_93732292_93733086_93733122_93733349_93733420_93734624_93734661_93736140_93736305_93736693_93736752_93737063_93737240_93738108_93738500_93739236_93739332_93741321
H1_mix_00014709	chr11	-	1539	14	NIC	ENSG00000166012.17	novel	1735	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	117.151194474764	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTCTAGAAAGTCAGCAT	-4	True	NA	-38	True	ATTAAA	-13	NA	93741494	93730282	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_93730448_93730676_93730713_93731149_93731217_93731752_93731800_93732243_93732292_93733086_93733122_93733349_93733398_93734624_93734661_93736140_93736305_93736693_93736752_93737063_93737240_93738108_93738500_93739236_93739332_93741321
H1_mix_00014710	chr11	-	1011	8	FSM	ENSG00000166012.17	ENST00000529435.5	1011	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	166.904592079256	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGAATAACAATTTATTGACT	-2	True	NA	-109	True	AAGAAA	-19	NA	93735238	93730353	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_93730448_93730676_93730713_93731149_93731217_93731752_93731800_93732243_93732292_93733086_93733122_93733349_93733420_93734624
H1_mix_00014712	chr11	-	2855	13	NIC	ENSG00000166012.17	novel	1735	14	NA	NA	6	-69	intron_retention	FALSE	canonical	0	0	junction_2	119.514178610276	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCAGCTCTTTAGAGGAT	20	False	NA	NA	False	GATAAA	-8	NA	93741470	93730422	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_93730448_93730676_93730713_93731149_93731217_93731752_93731800_93732243_93732292_93733086_93733122_93733349_93733398_93734624_93736305_93736693_93736752_93737063_93737240_93738108_93738500_93739236_93739332_93741321
H1_mix_00014713	chr11	-	1475	14	NNC	ENSG00000166012.17	novel	1735	14	NA	NA	-1	-69	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	136.947966622839	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCAGCTCTTTAGAGGAT	13	False	NA	NA	False	GATAAA	-8	NA	93741477	93730422	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_93730448_93730676_93730713_93731149_93731217_93731752_93731800_93732243_93732292_93733086_93733122_93733349_93733398_93734624_93734661_93736140_93736305_93736693_93736845_93737063_93737240_93738108_93738500_93739236_93739332_93741321
H1_mix_00014715	chr11	-	1632	6	FSM	ENSG00000166012.17	ENST00000448108.7	1632	6	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_5	26.081411004775	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTAGTAGCTGGGATTACA	-5	True	NA	NA	False	NA	NA	NA	93741495	93735566	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_93736305_93736693_93736752_93737063_93737240_93738108_93738500_93739236_93739332_93741321
H1_mix_00014718	chr11	-	4278	4	FSM	ENSG00000123901.9	ENST00000243673.7	4277	4	0	-1	0	1	multi-exon	FALSE	canonical	3	5	junction_3	3.29983164553722	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCTCTTGGATTTGCAA	2	True	NA	-4	True	AATAAA	-22	NA	94401419	94377314	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_94380774_94393484_94393619_94396398_94396525_94400860
H1_mix_00014719	chr11	-	6953	20	NIC	ENSG00000020922.13	novel	6841	20	NA	NA	4	19	combination_of_known_junctions	TRUE	canonical	3	156	junction_9	34.6251793799168	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGCTCTTGGCTGGCTTTT	-2	True	NA	2	True	ATTAAA	-21	NA	94493830	94415550	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_94420182_94429910_94429987_94435831_94435900_94437176_94437236_94445809_94445894_94447218_94447439_94456275_94456339_94459407_94459582_94460935_94461037_94464112_94464240_94467812_94467894_94470470_94470643_94471573_94471760_94476288_94476404_94478734_94478877_94479673_94479762_94485923_94486085_94490832_94490966_94492781_94492907_94493683
H1_mix_00014720	chr11	-	6860	20	FSM	ENSG00000020922.13	ENST00000323929.8	6841	20	0	-19	0	19	multi-exon	FALSE	canonical	0	0	junction_19	60.7981082953999	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGCTCTTGGCTGGCTTTT	-16	True	NA	2	True	ATTAAA	-21	NA	94493844	94415550	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_94420182_94429910_94429987_94435831_94435900_94437176_94437236_94445809_94445894_94447218_94447439_94456275_94456339_94459407_94459582_94460935_94461037_94464112_94464240_94467812_94467894_94470470_94470643_94471573_94471760_94476288_94476404_94478734_94478877_94479673_94479762_94485923_94486085_94490832_94490966_94492781_94492907_94493790
H1_mix_00014722	chr11	-	559	3	FSM	ENSG00000150316.12	ENST00000616442.4	559	3	0	0	0	0	multi-exon	FALSE	canonical	3	589	junction_2	16	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCTGACTTTTTTTATG	3306	False	NA	-27	True	ATTAAA	-20	NA	94970255	94963341	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_94963515_94966294_94966414_94969988
H1_mix_00014723	chr11	-	905	4	FSM	ENSG00000150316.12	ENST00000539856.5	905	4	0	0	0	0	multi-exon	FALSE	canonical	3	670	junction_2	5.71547606649408	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCTGTGGGACCCTAG	-11	True	NA	NA	False	NA	NA	NA	94973572	94970487	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_94971066_94971374_94971488_94972054_94972194_94973497
H1_mix_00014725	chr11	-	3825	11	FSM	ENSG00000077458.13	ENST00000398187.6	3823	11	0	-2	0	2	multi-exon	FALSE	canonical	3	31	junction_3	65.3730831458942	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTAGTTTTCAATGGCT	1327	False	NA	-6	True	AATAAA	-18	NA	95789615	95768950	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_95771651_95775921_95776024_95778821_95778958_95779077_95779136_95779606_95779688_95779878_95779927_95783064_95783265_95786118_95786275_95787623_95787679_95788498_95788564_95789391
H1_mix_00014726	chr11	-	3934	10	FSM	ENSG00000077458.13	ENST00000358780.10	3932	10	0	-2	0	2	multi-exon	FALSE	canonical	3	127	junction_3	28.2270337105897	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTAGTTTTCAATGGCT	2	True	NA	-6	True	AATAAA	-18	NA	95789782	95768950	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_95771651_95775921_95776024_95778821_95778958_95779606_95779688_95779878_95779927_95783064_95783265_95786118_95786275_95787623_95787679_95788498_95788564_95789391
H1_mix_00014727	chr11	-	3825	11	NIC	ENSG00000077458.13	novel	3823	11	NA	NA	23	-3	intron_retention	FALSE	canonical	3	31	junction_3	76.344023996643	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTTTGTATTAGTTTTC	-10	True	NA	-13	True	AATAAA	-11	NA	95790386	95768957	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_95771651_95775921_95776024_95778821_95778958_95779077_95779136_95779606_95779688_95779878_95779927_95783064_95783265_95786118_95786275_95787623_95787679_95788498_95788564_95790155
H1_mix_00014730	chr11	-	4389	15	FSM	ENSG00000087053.20	ENST00000675454.1	4387	15	0	-2	0	0	multi-exon	FALSE	canonical	3	29	junction_14	139.758702405107	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATGGATGACACATTCC	653	False	NA	-4	True	AATAAA	-18	NA	95923818	95832879	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95888155_95888262_95923691
H1_mix_00014731	chr11	-	4506	16	FSM	ENSG00000087053.20	ENST00000676166.1	4504	16	0	-2	0	0	multi-exon	FALSE	canonical	3	52	junction_15	139.641668407233	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATGGATGACACATTCC	607	False	NA	-4	True	AATAAA	-18	NA	95923864	95832879	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95888155_95888262_95914241_95914313_95923691
H1_mix_00014732	chr11	-	4628	17	FSM	ENSG00000087053.20	ENST00000409459.5	3420	17	0	-1208	0	0	multi-exon	FALSE	canonical	3	74	junction_13	167.802897769973	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATGGATGACACATTCC	-1	True	NA	-4	True	AATAAA	-18	NA	95924096	95832879	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95887611_95887685_95888155_95888262_95914241_95914313_95923874
H1_mix_00014733	chr11	-	4495	15	FSM	ENSG00000087053.20	ENST00000346299.10	4495	15	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_14	89.5462769426273	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATGGATGACACATTCC	-12	True	NA	-4	True	AATAAA	-18	NA	95924107	95832879	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95888155_95888262_95923874
H1_mix_00014734	chr11	-	4634	16	FSM	ENSG00000087053.20	ENST00000676177.1	4632	16	0	-2	0	0	multi-exon	FALSE	canonical	3	50	junction_14	177.88830453093	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATGGATGACACATTCC	348	False	NA	-4	True	AATAAA	-18	NA	95924123	95832879	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95882373_95882497_95888155_95888262_95923874
H1_mix_00014735	chr11	-	4405	14	FSM	ENSG00000087053.20	ENST00000676272.1	4403	14	0	-2	0	0	multi-exon	FALSE	canonical	0	0	junction_13	150.602105173999	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATGGATGACACATTCC	348	False	NA	-4	True	AATAAA	-18	NA	95924123	95832879	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95923874
H1_mix_00014736	chr11	-	3351	16	FSM	ENSG00000087053.20	ENST00000352297.11	3350	16	0	-1	0	0	multi-exon	FALSE	canonical	3	292	junction_15	95.6050672762113	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTGTCCAAAGTTGCCA	-5	True	NA	-1	True	ATTAAA	-28	NA	95924100	95834087	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95888155_95888262_95914241_95914313_95923874
H1_mix_00014738	chr11	-	3466	17	FSM	ENSG00000087053.20	ENST00000676261.1	3457	17	-9	0	0	0	multi-exon	FALSE	canonical	3	50	junction_14	174.000359195032	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTTTAAACTTTGTTCT	-12	True	NA	-16	True	ATTAAA	-13	NA	95924107	95834102	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95882373_95882497_95888155_95888262_95914241_95914313_95923874
H1_mix_00014739	chr11	-	3166	10	FSM	ENSG00000149231.16	ENST00000679708.1	3156	10	0	-10	0	0	multi-exon	FALSE	canonical	3	26	junction_9	44.3014365901448	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACCCTGTGTGTTCTATA	12	True	NA	NA	False	AATAAA	-26	NA	96389880	96352768	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_96353715_96358992_96359179_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961_96384762_96386253_96386294_96387529_96387614_96389364
H1_mix_00014740	chr11	-	7652	7	FSM	ENSG00000149231.16	ENST00000645439.1	7644	7	0	-8	0	0	multi-exon	FALSE	canonical	3	153	junction_2	9.46484724300046	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACCCTGTGTGTTCTATA	5	True	NA	NA	False	AATAAA	-26	NA	96389887	96352768	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_96353715_96358992_96359179_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961
H1_mix_00014741	chr11	-	3541	10	FSM	ENSG00000149231.16	ENST00000646818.2	2715	10	-24	-802	0	182	multi-exon	FALSE	canonical	3	70	junction_9	30.8760964717584	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGTCAAGGAGGAAGGGTA	8	False	NA	NA	False	AAAAAG	-20	NA	96389936	96351970	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_96353715_96358992_96359179_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961_96384762_96386253_96386294_96387529_96387614_96389843
H1_mix_00014742	chr11	-	4949	9	FSM	ENSG00000149231.16	ENST00000680171.1	4939	9	0	-10	0	0	multi-exon	FALSE	canonical	3	153	junction_2	9.38665941642712	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACCCTGTGTGTTCTATA	-20	True	NA	NA	False	AATAAA	-26	NA	96389912	96352768	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_96353715_96358992_96359179_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961_96384762_96386253_96386294_96387529
H1_mix_00014745	chr11	-	8757	2	FSM	ENSG00000149231.16	ENST00000679577.1	8744	2	0	-13	0	4	multi-exon	FALSE	canonical	3	164	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCAGGTTTTTCTATG	3	True	NA	NA	False	AATAAA	-16	NA	96389779	96380534	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_96383474_96383961
H1_mix_00014746	chr11	-	3967	5	FSM	ENSG00000149231.16	ENST00000530106.2	3972	5	9	-4	1	4	multi-exon	FALSE	canonical	3	70	junction_4	38.8908729652601	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCAGGTTTTTCTATG	-3	True	NA	NA	False	AATAAA	-16	NA	96389947	96380534	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_96383474_96383961_96384762_96386253_96386294_96387529_96387614_96389843
H1_mix_00014747	chr11	-	479	4	Intergenic	novelGene_259	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	3	junction_3	11.6141675934562	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTAGTCTCTGGTATTT	NA	False	NA	NA	False	ATTAAA	-18	NA	97420708	97335481	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_-_97335628_97392448_97392528_97399592_97399729_97420590
H1_mix_00014748	chr11	-	655	4	Intergenic	novelGene_260	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	26	junction_1	1.24721912892465	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTAGTCTCTGGTATTT	NA	False	NA	NA	False	ATTAAA	-18	NA	97580886	97335481	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_-_97335628_97392448_97392528_97399592_97399729_97580592
H1_mix_00014751	chr11	-	12675	8	FSM	ENSG00000137692.12	ENST00000260247.10	12675	8	0	0	0	0	multi-exon	FALSE	canonical	3	908	junction_5	52.9358487381911	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCAGTAATCTTTTGTGT	11	True	NA	NA	False	AATAAA	-42	NA	103092160	103050685	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_103062415_103064274_103064378_103066268_103066374_103066458_103066568_103082747_103082840_103083255_103083327_103089226_103089319_103091786
H1_mix_00014752	chr11	-	1310	8	FSM	ENSG00000137692.12	ENST00000529281.5	1310	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_7	339.465486208143	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGACTGAATATTGAAGTT	-6	True	NA	-30	True	NA	NA	NA	103092177	103062170	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_103062415_103064274_103064378_103066268_103066374_103066458_103066568_103082747_103082840_103083255_103083327_103089226_103089319_103091683
H1_mix_00014754	chr11	-	3497	6	ISM	ENSG00000170962.13	ENST00000393158.7	3838	7	163891	-2	36770	2	3prime_fragment	FALSE	canonical	3	24	junction_1	2.57681974534503	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCATTATTTAGTACTCA	NA	False	NA	-8	True	AATAAA	-21	NA	104000256	103907186	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_103909820_103926911_103927127_103943451_103943651_103947661_103947725_103996064_103996246_104000050
H1_mix_00014756	chr11	-	4103	3	FSM	ENSG00000170903.12	ENST00000301919.9	4103	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	40.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAATTTCAGATGATAC	-6	True	NA	2	True	AATAAA	-43	NA	106022240	106007898	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_106010111_106010455_106011068_106020961
H1_mix_00014759	chr11	-	3840	4	FSM	ENSG00000182359.15	ENST00000531837.2	3840	4	0	0	0	0	multi-exon	TRUE	canonical	3	53	junction_3	30.6195289897731	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAGGAATTGTTCATCTA	-13	True	NA	NA	False	AATAAA	-19	NA	106077347	106051097	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_106054456_106058864_106059110_106076506_106076708_106077311
H1_mix_00014760	chr11	-	3824	3	FSM	ENSG00000182359.15	ENST00000526793.5	3751	3	-73	0	-73	0	multi-exon	FALSE	canonical	3	55	junction_2	36.5	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAGGAATTGTTCATCTA	NA	False	NA	NA	False	AATAAA	-19	NA	106077532	106051097	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_106054456_106058864_106059110_106077311
H1_mix_00014761	chr11	-	297	2	FSM	ENSG00000182359.15	ENST00000532662.1	297	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAAACAAAAATAACAGA	718	False	NA	NA	False	AGTAAA	-26	NA	106076700	106054352	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_106054456_106076506
H1_mix_00014768	chr11	-	2923	8	NNC	ENSG00000110660.15	novel	2769	8	NA	NA	-137	0	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_6	45.642801251922	49	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTGTGTGGTTTCTTTG	3	True	NA	NA	False	ATTAAA	-25	NA	107858945	107790990	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_107792801_107803000_107803156_107804717_107804771_107805358_107805516_107806716_107806877_107811666_107811791_107815789_107815966_107858657
H1_mix_00014769	chr11	-	626	1	FSM	ENSG00000288012.1	ENST00000660738.1	605	1	-24	3	-24	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCGTGATGACTCTTAAT	NA	False	NA	-1	True	AGTAAA	-16	NA	108009306	108008680	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_108008700_108009300
H1_mix_00014770	chr11	-	8180	18	FSM	ENSG00000149308.17	ENST00000278612.9	6113	18	0	-2067	0	2067	multi-exon	TRUE	canonical	3	48	junction_11	13.9104899304017	391	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATTCATAAAGAAGCAAAG	-13	True	NA	NA	False	NA	NA	NA	108222638	108155147	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_108159020_108160879_108162015_108162119_108162181_108169743_108169853_108169927_108170044_108172198_108173852_108176245_108176375_108176993_108177091_108185231_108185320_108185402_108185495_108186481_108186570_108188097_108188180_108189105_108189331_108190459_108190501_108192117_108192191_108193956_108194018_108197301_108197421_108222499
H1_mix_00014771	chr11	-	4266	8	FSM	ENSG00000178202.13	ENST00000323468.10	4253	8	0	-13	0	9	multi-exon	FALSE	canonical	3	86	junction_3	9.08238932871562	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTTGTTTTTTAAGAAAG	18	True	NA	1	True	AATAAA	-34	NA	108498384	108472102	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_108474953_108477606_108477712_108479300_108479496_108481179_108481377_108482005_108482223_108486156_108486441_108490969_108491168_108498164
H1_mix_00014773	chr11	-	2583	1	ISM	ENSG00000110723.12	ENST00000265843.9	10304	6	85750	1	30169	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCACTATTTGATTTGGTT	NA	False	NA	-7	True	AATAAA	-13	NA	108508018	108505435	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_108505400_108508000
H1_mix_00014776	chr11	-	7333	14	FSM	ENSG00000137710.17	ENST00000645495.2	4392	14	0	-2941	0	2941	multi-exon	FALSE	canonical	3	281	junction_1	27.4103163751713	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGTAATGCCCCATTCC	1	True	NA	NA	False	NA	NA	NA	110296614	110226499	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_110232034_110233236_110233480_110236098_110236192_110237491_110237653_110247702_110247834_110253945_110254110_110255288_110255386_110257766_110257914_110258105_110258190_110263959_110264235_110264778_110264875_110272535_110272620_110279680_110279757_110296466
H1_mix_00014778	chr11	-	5372	2	FSM	ENSG00000196167.10	ENST00000355430.4	5442	2	70	0	70	0	multi-exon	FALSE	canonical	2	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTATGACTAAATTAACTT	5752	False	NA	NA	False	AATAAA	-19	NA	111299744	111293445	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_111298667_111299593
H1_mix_00014779	chr11	-	2082	16	FSM	ENSG00000137713.16	ENST00000311129.9	2082	16	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	228.494259592373	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCGAACGAAATTTTTACC	-5	True	NA	-5	True	AATAAA	-23	NA	111766382	111726907	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_111727058_111737447_111737570_111742052_111742145_111742522_111742666_111743375_111743531_111747953_111748015_111752158_111752333_111753442_111753578_111754498_111754570_111754979_111755095_111755294_111755451_111759803_111759952_111760818_111761052_111764804_111764906_111765293_111765385_111766247
H1_mix_00014780	chr11	-	5385	15	FSM	ENSG00000137713.16	ENST00000527614.6	5553	15	0	168	0	-168	multi-exon	FALSE	canonical	3	586	junction_9	65.7296953982206	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCCCGTTTGCCTCCAC	-12	True	NA	NA	False	NA	NA	NA	111766389	111738044	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_111741613_111742052_111742145_111742522_111742666_111743375_111743531_111747953_111748015_111752158_111752333_111753442_111753578_111754498_111754570_111754979_111755095_111755294_111755451_111759803_111759952_111760818_111761052_111764804_111764906_111765293_111765385_111766247
H1_mix_00014781	chr11	-	1953	14	FSM	ENSG00000137713.16	ENST00000341980.10	1953	14	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_6	176.604127220966	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTCCTGCATCCTCACTG	9	True	NA	33	True	NA	NA	NA	111766368	111741320	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_111741613_111742052_111742145_111742522_111742666_111743375_111743531_111747953_111748015_111752158_111752333_111754498_111754570_111754979_111755095_111755294_111755451_111759803_111759952_111760818_111761052_111764804_111764906_111765293_111765385_111766247
H1_mix_00014782	chr11	-	6165	15	FSM	ENSG00000086848.15	ENST00000616540.5	6158	15	0	-7	0	7	multi-exon	TRUE	canonical	3	22	junction_5	19.2937813815747	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTAATGTGACATTTTC	-1	True	NA	-12	True	AATAAA	-22	NA	111871581	111782187	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_111786521_111809642_111809774_111836164_111836295_111837467_111837616_111838248_111838400_111840654_111840810_111844600_111844724_111853379_111853486_111853648_111853737_111857601_111857738_111860546_111860636_111865180_111865252_111868601_111868737_111870231_111870371_111871351
H1_mix_00014783	chr11	-	2028	15	FSM	ENSG00000086848.15	ENST00000614444.4	2028	15	0	0	0	0	multi-exon	TRUE	canonical	3	55	junction_5	13.5217134525872	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTCTATTTCAAAGTCT	15	True	NA	16	True	AATAAA	-45	NA	111871533	111786255	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_111786521_111809642_111809774_111836164_111836295_111837467_111837616_111838248_111838379_111840654_111840810_111844600_111844724_111853379_111853486_111853648_111853737_111857601_111857738_111860546_111860636_111865180_111865252_111868601_111868737_111870231_111870371_111871351
H1_mix_00014784	chr11	-	2345	15	FSM	ENSG00000086848.15	ENST00000398006.6	2345	15	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_14	23.1257652934592	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGAATCTGGGTGCTCT	2	True	NA	-12	True	AATAAA	-17	NA	111871301	111786283	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_111786521_111809642_111809774_111836164_111836295_111837467_111837616_111838248_111838379_111840654_111840810_111844600_111844724_111853379_111853486_111853648_111853737_111857601_111857738_111860546_111860636_111865180_111865252_111868601_111868737_111870231_111870371_111870774
H1_mix_00014785	chr11	-	3332	5	FSM	ENSG00000255561.7	ENST00000260257.9	2774	5	-477	-81	-185	81	multi-exon	TRUE	canonical	3	9	junction_4	4.30116263352131	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAACTGTGATTAAACTTT	NA	False	NA	NA	False	NA	NA	NA	111879642	111873974	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_111876105_111876480_111876640_111876807_111877012_111878555_111878713_111878960
H1_mix_00014787	chr11	-	1035	4	FSM	ENSG00000109846.9	ENST00000527899.6	1107	4	44	28	44	-4	multi-exon	FALSE	canonical	3	5	junction_3	4.10960933531265	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAGCTAATAAAATATCAT	-6	True	NA	-30	True	NA	NA	NA	111913303	111908653	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_111908968_111910326_111910450_111911523_111911923_111913104
H1_mix_00014788	chr11	-	886	4	FSM	ENSG00000109846.9	ENST00000527950.5	887	4	0	1	0	0	multi-exon	FALSE	canonical	3	6	junction_3	3.74165738677394	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTGTCTTGTGTTTGAA	16	False	NA	0	True	AATAAA	-18	NA	111923722	111908623	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_111908968_111910326_111910450_111911523_111911923_111923702
H1_mix_00014790	chr11	-	487	3	FSM	ENSG00000150773.12	ENST00000525744.1	487	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	3.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGATCCTGTATACATT	1175	False	NA	NA	False	ATTAAA	-15	NA	112073069	112070992	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_112071284_112071634_112071759_112072997
H1_mix_00014791	chr11	-	822	2	FSM	ENSG00000150779.12	ENST00000541231.1	805	2	0	-17	0	0	multi-exon	FALSE	canonical	3	2090	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAAGATGTGTATTCCTTG	-1	False	NA	NA	False	AAGAAA	-31	NA	112086798	112084799	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_112085463_112086639
H1_mix_00014792	chr11	-	775	3	FSM	ENSG00000150779.12	ENST00000507614.1	741	3	-34	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	185	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGAGTGAAATTTATTTA	-8	True	NA	-32	True	AGTAAA	-13	NA	112086756	112085148	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_112085463_112085966_112086311_112086639
H1_mix_00014793	chr11	-	1155	3	FSM	ENSG00000150779.12	ENST00000509359.6	1155	3	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_1	68.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAAGATGTGTATTCCTTG	-1	False	NA	NA	False	AAGAAA	-31	NA	112086798	112084799	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_112085463_112085977_112086311_112086639
H1_mix_00014795	chr11	-	543	3	FSM	ENSG00000150782.12	ENST00000534225.1	880	3	11	326	7	-326	multi-exon	FALSE	canonical	1	1	junction_1	0.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCTAAGATTAGCATGAAG	8	True	NA	NA	False	AATAGA	-18	NA	112164082	112153324	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_112153604_112154974_112155062_112163905
H1_mix_00014800	chr11	-	4473	23	NIC	ENSG00000048028.11	novel	4669	25	NA	NA	0	12	combination_of_known_splicesites	FALSE	canonical	3	57	junction_22	114.14700721525	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGGTCTTTATTTAAATA	-15	True	NA	1	True	AATAAA	-27	NA	113875533	113797861	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_113799416_113801482_113801679_113803157_113803282_113803797_113803878_113804672_113804752_113804867_113805047_113808297_113808438_113809062_113809255_113812275_113812505_113813884_113813956_113815173_113815383_113817657_113817838_113823604_113823701_113827232_113827361_113829196_113829346_113830866_113830947_113831919_113831994_113833419_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113852500_113852634_113875444
H1_mix_00014802	chr11	-	4410	22	FSM	ENSG00000048028.11	ENST00000545540.5	3431	22	-36	-943	-36	12	multi-exon	FALSE	canonical	3	63	junction_21	89.406686302287	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGGTCTTTATTTAAATA	NA	False	NA	1	True	AATAAA	-27	NA	113875606	113797861	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_113799416_113801482_113801679_113803157_113803282_113803797_113803878_113804672_113804752_113804867_113805047_113808297_113808438_113809062_113809255_113812275_113812505_113813884_113813956_113815173_113815383_113817657_113817838_113823604_113823701_113827232_113827361_113829196_113829346_113830866_113830944_113831919_113831994_113833419_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113875444
H1_mix_00014804	chr11	-	4530	24	NIC	ENSG00000048028.11	novel	4669	25	NA	NA	5	4	combination_of_known_junctions	FALSE	canonical	3	351	junction_23	40.7909512186619	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGCAGTATGGTCTTTA	-5	True	NA	-7	True	AATAAA	-19	NA	113875523	113797869	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_113799416_113801482_113801679_113803157_113803282_113803797_113803878_113804672_113804752_113804867_113805047_113808297_113808438_113809062_113809255_113812275_113812505_113813884_113813956_113815173_113815383_113817657_113817838_113823604_113823701_113827232_113827361_113829196_113829346_113830866_113830944_113831919_113831994_113833419_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113852500_113852634_113854257_113854336_113875444
H1_mix_00014807	chr11	-	1900	15	FSM	ENSG00000048028.11	ENST00000537706.5	1900	15	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_14	37.3849937154206	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATGTTGTTCTGTTTCTT	-10	True	NA	NA	False	AATAAA	-14	NA	113875528	113813754	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_113813956_113815173_113815383_113817657_113817838_113823604_113823701_113827232_113827361_113829196_113829346_113830866_113830944_113831919_113831994_113833419_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113852500_113852634_113854257_113854336_113875444
H1_mix_00014812	chr11	-	8641	12	FSM	ENSG00000182985.18	ENST00000331581.11	8675	12	0	34	0	-34	multi-exon	FALSE	canonical	3	16	junction_3	88.0217854326064	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTATCTGGCTTCAGTTAC	0	True	NA	NA	False	NA	NA	NA	115504415	115169269	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_115176593_115178643_115178776_115190887_115190942_115198405_115198439_115209573_115209658_115214607_115214781_115217891_115217992_115229112_115229272_115231352_115231491_115238499_115238653_115240273_115240421_115504270
H1_mix_00014813	chr11	-	8554	10	FSM	ENSG00000182985.18	ENST00000452722.7	8588	10	0	34	0	-34	multi-exon	FALSE	canonical	3	89	junction_2	49.4772675074119	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTATCTGGCTTCAGTTAC	0	True	NA	NA	False	NA	NA	NA	115504415	115169269	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_115176593_115178643_115178776_115209573_115209658_115214607_115214781_115217891_115217992_115229112_115229272_115231352_115231491_115238499_115238653_115240273_115240421_115504270
H1_mix_00014814	chr11	-	4206	11	FSM	ENSG00000182985.18	ENST00000537058.5	3550	11	26	-682	0	0	multi-exon	FALSE	canonical	3	71	junction_2	63.3384559331849	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTAATCTCTTTATGGA	26	False	NA	0	True	AATAAA	-24	NA	115504389	115173624	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_115176593_115178643_115178776_115198405_115198439_115209573_115209658_115214607_115214781_115217891_115217992_115229112_115229272_115231352_115231491_115238499_115238653_115240273_115240421_115504270
H1_mix_00014816	chr11	-	2199	10	FSM	ENSG00000137656.12	ENST00000260210.5	2192	10	0	-7	0	4	multi-exon	FALSE	canonical	3	98	junction_6	18.0315224667563	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAACTGGGTATTCTGTTT	0	True	NA	-3	True	AATAAA	-29	NA	116772987	116748165	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_116748576_116757145_116757228_116757765_116757951_116758268_116758408_116759073_116759180_116760734_116760953_116762552_116763267_116765361_116765447_116770128_116770223_116772821
H1_mix_00014817	chr11	-	6534	14	FSM	ENSG00000109917.11	ENST00000227322.8	6539	14	0	5	0	-5	multi-exon	TRUE	canonical	3	537	junction_3	37.5531181979677	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAACTTGAGTGTTAGAAT	-10	True	NA	-2	True	AATAAA	-17	NA	116788023	116773803	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_116779060_116779771_116779838_116782157_116782245_116782918_116783030_116783529_116783620_116784377_116784449_116784854_116784922_116785098_116785147_116785513_116785637_116785795_116785883_116786510_116786582_116786968_116787060_116787481_116787644_116787819
H1_mix_00014818	chr11	-	691	8	FSM	ENSG00000109917.11	ENST00000449430.1	691	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	210.382547580665	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGGTCACTGGCCAGT	6576	False	NA	NA	False	NA	NA	NA	116785843	116782157	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_116782245_116782918_116783030_116783529_116783620_116784377_116784499_116784858_116784922_116785098_116785147_116785513_116785637_116785795
H1_mix_00014819	chr11	-	937	4	FSM	ENSG00000118137.10	ENST00000359492.6	932	4	0	-5	0	5	multi-exon	FALSE	canonical	3	11	junction_3	221.460304945755	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTCTTTTGGGAGAATA	48	False	NA	4	True	AATAAA	-23	NA	116837609	116835745	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_116836412_116837000_116837158_116837344_116837408_116837558
H1_mix_00014821	chr11	-	6366	25	FSM	ENSG00000160584.17	ENST00000445177.6	6364	25	0	-2	0	2	multi-exon	TRUE	canonical	3	78	junction_16	27.1368701626076	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTTGTCCTGCCTTTTGT	4	True	NA	4	True	ATTAAA	-31	NA	117098428	116843399	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_116845630_116846382_116846554_116847475_116847609_116849119_116849284_116857809_116858700_116859264_116859605_116861273_116861384_116861840_116861927_116862201_116862328_116863667_116863819_116867945_116868090_116870330_116870402_116873480_116873637_116873902_116874057_116875157_116875268_116875373_116875452_116875865_116876010_116876252_116876364_116876923_116877043_116896252_116896377_116897192_116897318_116927218_116927381_116954043_116954108_116956947_116957065_117098142
H1_mix_00014824	chr11	-	3906	24	NIC	ENSG00000160584.17	novel	3858	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_16	30.8481248262031	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCCACAGTATCTAGCAG	152	False	NA	NA	False	AATGAA	-13	NA	117098305	116845592	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_116845630_116846382_116846554_116847475_116847609_116849119_116849284_116857809_116858700_116859264_116859605_116861273_116861384_116861840_116861927_116862201_116862328_116863667_116863819_116867945_116868090_116870330_116870402_116873480_116873637_116873902_116874057_116875157_116875268_116875373_116875452_116876252_116876364_116876923_116877043_116896252_116896377_116897192_116897318_116927218_116927381_116954043_116954108_116956947_116957065_117098142
H1_mix_00014825	chr11	-	3858	24	FSM	ENSG00000160584.17	ENST00000446921.6	3858	24	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_16	35.5348014937789	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCCACAGTATCTAGCAG	-5	True	NA	NA	False	AATGAA	-13	NA	117098437	116845592	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_116845630_116846382_116846554_116847475_116847609_116849119_116849284_116857809_116858520_116859264_116859605_116861273_116861384_116861840_116861927_116862201_116862328_116863667_116863819_116867945_116868090_116870330_116870402_116873480_116873637_116873902_116874057_116875157_116875268_116875373_116875452_116876252_116876364_116876923_116877043_116896252_116896377_116897192_116897318_116927218_116927381_116954043_116954108_116956947_116957065_117098142
H1_mix_00014826	chr11	-	3047	13	FSM	ENSG00000160584.17	ENST00000413553.1	3054	13	0	7	0	-7	multi-exon	FALSE	canonical	3	78	junction_5	29.4222138301431	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTTCGTCTTGTGAGAC	NA	False	NA	NA	False	AATAAA	-16	NA	116957044	116868798	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_116870402_116873480_116873637_116873902_116874057_116875157_116875268_116875373_116875452_116875865_116876010_116876252_116876364_116876923_116877043_116896252_116896377_116897192_116897318_116927218_116927381_116954043_116954108_116956947
H1_mix_00014831	chr11	-	4197	17	FSM	ENSG00000160613.15	ENST00000320934.8	4197	17	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_16	21.6440486912685	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCGTAGCCTGTCATGCCG	5	True	NA	NA	False	NA	NA	NA	117232073	117204336	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_117206357_117206680_117206799_117207066_117207161_117207969_117208065_117208896_117209054_117218465_117218569_117219056_117219165_117219590_117219759_117223207_117223309_117224077_117224217_117224700_117224756_117225930_117226022_117227156_117227323_117228215_117228351_117229376_117229857_117230348_117230469_117232026
H1_mix_00014832	chr11	-	5835	9	FSM	ENSG00000186318.18	ENST00000313005.11	5835	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	4.30116263352131	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTAGGGTTACTTTTTTT	-9	True	NA	-2	True	AGTAAA	-21	NA	117316256	117285697	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_117289808_117290487_117290660_117290899_117291050_117291711_117291814_117293053_117293189_117293870_117294009_117295130_117295348_117296872_117296962_117315534
H1_mix_00014837	chr11	-	4487	5	FSM	ENSG00000177098.9	ENST00000324727.9	4487	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	3.34477204006491	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGATTTGGGGGCTTCC	-16	True	NA	NA	False	AATAAA	-16	NA	118152823	118133376	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_118137121_118141206_118141337_118143832_118144062_118145056_118145230_118152612
H1_mix_00014839	chr11	-	3981	6	FSM	ENSG00000160588.10	ENST00000278949.9	3983	6	0	2	0	-2	multi-exon	FALSE	canonical	3	18	junction_3	4.28952211790544	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTTTGGTGTGTGCATA	-37	True	NA	-7	True	AATAAA	-20	NA	118252365	118226691	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_118229921_118233459_118233524_118235423_118235590_118237049_118237261_118240210_118240378_118252221
H1_mix_00014842	chr11	-	1223	5	FSM	ENSG00000149573.9	ENST00000438295.2	1370	5	127	20	-23	-20	multi-exon	FALSE	canonical	3	17	junction_3	4.96865172858795	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCTTTTTTAAATCAAAA	9	True	NA	-24	True	AATAAA	-17	NA	118264409	118256930	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_118257314_118260053_118260202_118262437_118262649_118262930_118263098_118264095
H1_mix_00014844	chr11	-	1887	12	FSM	ENSG00000118096.10	ENST00000264021.8	1562	12	-144	-181	-40	166	multi-exon	TRUE	canonical	3	55	junction_9	9.78022967838606	612	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATTTTTCCTCTGGAAT	6373	False	NA	NA	False	AATAAA	-38	NA	118566075	118544361	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_118545012_118545408_118545495_118545792_118545854_118551785_118551853_118552213_118552336_118554458_118554588_118554989_118555084_118555247_118555323_118556905_118557046_118559784_118559865_118564964_118565062_118565789
H1_mix_00014846	chr11	-	434	2	Antisense	novelGene_ENSG00000255422.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	41	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTT	NA	False	NA	0	True	ATTAAA	-21	NA	118720243	118717069	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr11_-_118717453_118720192
H1_mix_00014847	chr11	-	3042	3	NNC	ENSG00000287238.1	novel	1286	2	NA	NA	-462	4037	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	7	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGTGGTCTCTTTACA	NA	False	NA	3	True	ATTAAA	-24	NA	118729874	118717066	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_118717450_118720192_118722076_118729098
H1_mix_00014849	chr11	-	6155	14	FSM	ENSG00000110367.14	ENST00000620157.4	6152	14	0	-3	0	0	multi-exon	FALSE	canonical	2	7	junction_13	105.445911427074	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGGTATGTCCTT	-7	True	NA	-4	True	AATAAA	-20	NA	118790948	118747762	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_118752098_118754704_118754888_118755401_118755504_118756259_118756324_118757170_118757288_118758773_118758903_118759921_118760045_118763211_118763307_118765208_118765356_118768222_118768353_118779631_118779737_118781120_118781185_118786051_118786519_118790854
H1_mix_00014850	chr11	-	6128	14	FSM	ENSG00000110367.14	ENST00000534980.7	6128	14	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_1	37.0002398840776	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGGTATGTCCTT	-16	True	NA	-4	True	AATAAA	-20	NA	118791164	118747762	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_118752098_118754704_118754888_118755401_118755504_118756259_118756324_118757170_118757288_118758773_118758903_118759921_118760045_118763211_118763307_118765208_118765356_118768222_118768353_118779631_118779737_118781120_118781185_118786051_118786519_118791097
H1_mix_00014853	chr11	-	7689	8	FSM	ENSG00000186174.13	ENST00000334801.7	10005	8	58	2258	58	3	multi-exon	FALSE	canonical	1	2	junction_7	5.00611870512435	196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCCTCTTTGCATCTGC	8973	False	NA	0	True	ATTAAA	-22	NA	118910846	118896132	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_118899509_118899916_118900199_118900618_118902909_118902989_118903075_118903235_118903453_118907482_118907603_118908269_118908656_118909913
H1_mix_00014854	chr11	-	1510	2	NNC	ENSG00000255121.2	novel	1359	2	NA	NA	2	3840	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	0	40	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACACAAAACAAAAAAACC	-8	True	NA	NA	False	AATAAA	-27	NA	118998002	118990983	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_118992219_118997727
H1_mix_00014856	chr11	-	508	5	FSM	ENSG00000118181.11	ENST00000532567.5	508	5	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_3	7693.60458432847	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGAGTATGTCTGTTTC	8776	False	NA	-10	True	AATAAA	-17	NA	119018330	119015711	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119015759_119015840_119015940_119017361_119017546_119017924_119018054_119018281
H1_mix_00014857	chr11	-	711	5	FSM	ENSG00000118181.11	ENST00000527791.5	711	5	0	0	0	0	multi-exon	FALSE	canonical	3	705	junction_3	7512.68984369114	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGAGTATGTCTGTTTC	-23	True	NA	-10	True	AATAAA	-17	NA	119018678	119015711	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119015759_119015840_119015940_119017361_119017434_119017957_119018054_119018281
H1_mix_00014858	chr11	-	484	5	FSM	ENSG00000118181.11	ENST00000527673.2	483	5	0	-1	0	1	multi-exon	FALSE	canonical	3	8537	junction_1	4545.01470707191	6616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGAATGAGTATGTCTG	-2	True	NA	-14	True	AATAAA	-13	NA	119018343	119015715	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119015759_119015840_119015940_119017361_119017546_119017957_119018054_119018281
H1_mix_00014859	chr11	-	2499	2	FSM	ENSG00000118181.11	ENST00000524864.1	1078	2	0	-1421	0	-214	multi-exon	FALSE	canonical	3	13730	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTATCAAACTGGTTTCA	-11	True	NA	NA	False	NA	NA	NA	119018666	119015939	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119018054_119018281
H1_mix_00014860	chr11	-	2631	6	FSM	ENSG00000137700.18	ENST00000526275.5	2626	6	0	-5	0	0	multi-exon	FALSE	canonical	3	271	junction_5	9.66643677887566	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGTGATTCATTTTTTC	1846	False	NA	-2	True	ATTAAA	-22	NA	119029034	119024350	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119025077_119025190_119025330_119025966_119026081_119026602_119026689_119026936_119027096_119027627
H1_mix_00014861	chr11	-	5867	3	FSM	ENSG00000137700.18	ENST00000532085.1	5862	3	0	-5	0	0	multi-exon	FALSE	canonical	3	271	junction_2	6	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGTGATTCATTTTTTC	17	True	NA	-2	True	ATTAAA	-22	NA	119030863	119024350	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119025077_119025190_119027096_119027627
H1_mix_00014862	chr11	-	2100	9	FSM	ENSG00000137700.18	ENST00000527992.5	2040	9	-23	-37	3	0	multi-exon	FALSE	canonical	3	77	junction_8	70.7149869193228	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGTGATTCATTTTTTC	-23	True	NA	-2	True	ATTAAA	-22	NA	119030903	119024350	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119025077_119025190_119025330_119025966_119026081_119026602_119026689_119026936_119027096_119027627_119027873_119028193_119028427_119029221_119029565_119030848
H1_mix_00014863	chr11	-	1957	7	NIC	ENSG00000137700.18	novel	2040	9	NA	NA	0	-2	intron_retention	FALSE	canonical	3	35	junction_3	89.0068661521246	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTCAGTGATTCATTTTT	1316	False	NA	-4	True	ATTAAA	-20	NA	119029564	119024352	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_119025077_119025190_119025330_119025966_119026081_119026936_119027096_119027627_119027873_119028193_119028427_119029221
H1_mix_00014867	chr11	-	4465	26	NIC	ENSG00000149428.20	novel	4598	26	NA	NA	1	4	intron_retention	FALSE	canonical	3	506	junction_25	198.575873660422	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGCTGTGAGTTTTTAAA	-3	True	NA	-2	True	AATAAA	-20	NA	119057201	119044183	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_119045655_119045780_119045832_119046416_119046468_119046561_119046803_119047733_119047819_119047946_119048081_119048247_119048371_119048475_119048564_119048713_119048887_119049017_119049204_119049555_119049636_119049776_119049838_119051034_119051174_119051437_119051626_119051818_119051952_119052089_119052173_119052294_119052430_119052636_119052830_119054120_119054237_119054493_119054676_119054983_119055061_119055184_119055340_119055492_119055572_119055749_119055844_119056069_119056168_119057152
H1_mix_00014868	chr11	-	4648	26	FSM	ENSG00000149428.20	ENST00000617285.5	4598	26	-41	-9	-19	9	multi-exon	FALSE	canonical	3	781	junction_25	157.510055552019	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTGAGTTTTTAAAAATAG	NA	False	NA	3	True	AATAAA	-25	NA	119057246	119044178	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119045655_119045780_119045832_119046416_119046468_119046561_119046803_119047733_119047819_119047946_119048081_119048247_119048371_119048475_119048564_119048713_119048887_119049017_119049204_119049555_119049636_119049776_119049838_119051034_119051174_119051437_119051626_119051818_119051952_119052089_119052173_119052294_119052430_119052636_119052830_119054120_119054237_119054493_119054676_119054983_119055061_119055184_119055340_119055492_119055572_119055749_119055844_119056069_119056168_119057019
H1_mix_00014869	chr11	-	4512	26	NIC	ENSG00000149428.20	novel	4598	26	NA	NA	0	4	intron_retention	FALSE	canonical	3	266	junction_2	256.207528382755	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGCTGTGAGTTTTTAAA	16	True	NA	-2	True	AATAAA	-20	NA	119057112	119044183	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_119045655_119045780_119045835_119046416_119046468_119046561_119046803_119047733_119047819_119047946_119048081_119048247_119048371_119048475_119048564_119048713_119048887_119049017_119049204_119049555_119049636_119049776_119049838_119051034_119051174_119051437_119051626_119051818_119051952_119052089_119052173_119052294_119052430_119052636_119052830_119054120_119054237_119054493_119054676_119054983_119055061_119055184_119055340_119055492_119055572_119055749_119055844_119056069_119056168_119057019
H1_mix_00014870	chr11	-	4367	26	FSM	ENSG00000149428.20	ENST00000652093.1	4367	26	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_2	282.027051184811	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTTCTGTATGTTTGAA	-4	True	NA	67	True	NA	NA	NA	119057227	119044310	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119045655_119045780_119045835_119046416_119046468_119046561_119046803_119047733_119047819_119047946_119048081_119048247_119048371_119048475_119048564_119048713_119048887_119049017_119049204_119049555_119049636_119049776_119049838_119051034_119051174_119051437_119051626_119051818_119051952_119052089_119052173_119052294_119052430_119052636_119052830_119054120_119054237_119054493_119054676_119054983_119055061_119055184_119055340_119055492_119055572_119055749_119055844_119056069_119056168_119057152
H1_mix_00014881	chr11	-	1614	1	FSM	ENSG00000188486.4	ENST00000530167.2	1592	1	-2	-20	-2	20	mono-exon	FALSE	NA	NA	NA	NA	NA	190	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAGAGAGTTGTAGAATT	-3	True	NA	-3	True	ATTAAA	-40	NA	119095467	119093853	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119093900_119095500
H1_mix_00014882	chr11	-	1373	2	FSM	ENSG00000188486.4	ENST00000375167.1	1373	2	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAATGGAGCGTTTGTTTT	6700	False	NA	-28	True	ATTAAA	-15	NA	119095449	119093878	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119094262_119094459
H1_mix_00014883	chr11	-	2214	7	FSM	ENSG00000172269.20	ENST00000682232.1	2214	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	208.196755231413	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCACTCCAGCCTGGGT	-1	True	NA	NA	False	NA	NA	NA	119101878	119096024	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119097064_119097141_119097298_119097854_119098044_119098402_119098488_119100261_119100409_119100629_119100844_119101494
H1_mix_00014884	chr11	-	1913	9	FSM	ENSG00000172269.20	ENST00000354202.9	1913	9	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_8	48.2310519789896	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATGTAGGTATATTT	-16	True	NA	-10	True	AATAAA	-18	NA	119101853	119096509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119097064_119097141_119097298_119097463_119097552_119097854_119098044_119098402_119098488_119100261_119100409_119100629_119100844_119101017_119101139_119101494
H1_mix_00014886	chr11	-	1153	6	FSM	ENSG00000172269.20	ENST00000638850.1	1152	6	0	-1	0	0	multi-exon	FALSE	canonical	3	18	junction_2	163.198774505203	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAATTAAGTGTTCTGAT	1741	False	NA	-95	True	NA	NA	NA	119100408	119096594	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119097064_119097141_119097298_119097444_119097552_119097854_119098044_119098402_119098488_119100261
H1_mix_00014889	chr11	-	1815	9	FSM	ENSG00000172269.20	ENST00000640747.1	1813	9	0	-2	0	0	multi-exon	FALSE	canonical	3	17	junction_7	140.324400942958	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAATTAAGTGTTCTGAT	-19	True	NA	-95	True	NA	NA	NA	119101856	119096594	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119097064_119097141_119097298_119097463_119097552_119097854_119098044_119098402_119098488_119100261_119100409_119100629_119100828_119101017_119101139_119101494
H1_mix_00014894	chr11	-	3697	13	FSM	ENSG00000036672.16	ENST00000260187.7	3697	13	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_11	9.06879570591132	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGCAGATGTTGGAATCT	-11	True	NA	-6	True	AATAAA	-20	NA	119381690	119355214	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119356923_119357186_119357308_119357482_119357591_119357756_119357836_119357980_119358062_119358148_119358253_119358772_119358838_119359023_119359135_119359230_119359343_119359536_119359661_119360183_119360235_119372706_119373522_119381472
H1_mix_00014896	chr11	-	4505	4	FSM	ENSG00000154096.14	ENST00000284240.10	4502	4	0	-3	0	3	multi-exon	FALSE	canonical	3	1122	junction_3	5.31245915016974	191	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTAGAGGACTCTAGCCT	2	True	NA	NA	False	AATAAA	-28	NA	119423172	119415472	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119419521_119420050_119420387_119420868_119420930_119423112
H1_mix_00014901	chr11	-	5958	6	FSM	ENSG00000110400.11	ENST00000264025.8	5956	6	0	-2	0	2	multi-exon	FALSE	canonical	3	67	junction_1	24.1876001289917	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGCATCCCATCACTGC	-9	True	NA	NA	False	AATAAA	-17	NA	119729200	119660989	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119665298_119675158_119675311_119677101_119677220_119677554_119677858_119678414_119678766_119728474
H1_mix_00014902	chr11	-	1059	6	FSM	ENSG00000110400.11	ENST00000340882.2	1059	6	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	28.4042250378355	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAGACTTCACCTGGGAC	904	False	NA	NA	False	NA	NA	NA	119728553	119674591	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119674648_119675158_119675311_119677101_119677220_119677554_119677858_119678414_119678766_119728474
H1_mix_00014903	chr11	-	1492	1	FSM	ENSG00000232460.4	ENST00000527904.1	1012	1	1	-481	1	481	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGTTTATGATAGTTTG	NA	False	NA	NA	False	AAAACA	-31	NA	121362864	121361372	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_121361400_121362900
H1_mix_00014904	chr11	-	2271	9	FSM	ENSG00000109971.14	ENST00000534624.6	2264	9	0	-7	0	7	multi-exon	FALSE	canonical	3	6979	junction_5	2043.38068146271	1258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCTTTAAATAATCTCCC	-1	True	NA	NA	False	AATAAA	-33	NA	123062136	123057481	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_123057920_123058251_123058485_123058631_123058831_123059058_123059262_123059472_123060029_123060115_123060269_123060592_123060799_123061119_123061330_123062063
H1_mix_00014905	chr11	-	2301	4	FSM	ENSG00000109971.14	ENST00000532091.1	2301	4	0	0	0	0	multi-exon	FALSE	canonical	3	6979	junction_3	2664.23051221591	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACAATTGCTTTGAGTCT	2564	False	NA	NA	False	AATAAA	-19	NA	123060426	123057495	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_123057920_123058251_123059262_123059472_123060029_123060115
H1_mix_00014906	chr11	-	2296	8	FSM	ENSG00000109971.14	ENST00000227378.7	2186	8	-109	-1	42	0	multi-exon	FALSE	canonical	3	6979	junction_5	2153.0990100176	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACAATTGCTTTGAGTCT	1549	False	NA	NA	False	AATAAA	-19	NA	123061441	123057495	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_123057920_123058251_123058485_123058631_123058831_123059058_123059262_123059472_123060029_123060115_123060269_123060592_123060799_123061119
H1_mix_00014907	chr11	-	963	4	FSM	ENSG00000109971.14	ENST00000524552.5	963	4	0	0	0	0	multi-exon	FALSE	canonical	3	7584	junction_3	2158.80898233777	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGGTGCTTCCTCAGG	3542	False	NA	NA	False	NA	NA	NA	123059448	123057778	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_123057920_123058251_123058485_123058631_123058831_123059058
H1_mix_00014909	chr11	-	1509	5	FSM	ENSG00000109971.14	ENST00000527983.5	1509	5	0	0	0	0	multi-exon	FALSE	canonical	3	6979	junction_1	281.923194327817	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCTGAGAATGTTCAAGA	783	False	NA	89	True	NA	NA	NA	123062207	123059232	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_123060029_123060115_123060269_123060592_123060799_123061119_123061330_123062063
H1_mix_00014913	chr11	-	5236	8	NNC	ENSG00000166250.12	novel	5032	7	NA	NA	-1316	160	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_7	47.65565259746	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAGGTATAAGTTGCACAG	NA	False	NA	NA	False	NA	NA	NA	123196564	123069711	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_123073775_123074701_123074844_123083084_123083208_123083679_123083848_123084511_123084714_123097794_123097953_123194912_123195227_123196498
H1_mix_00014915	chr11	-	4174	7	FSM	ENSG00000166261.11	ENST00000529691.1	3384	7	6	-796	0	-70	multi-exon	FALSE	canonical	3	68	junction_6	26.0154868406408	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTTTTAATTTTCTTAT	-16	True	NA	NA	False	TATAAA	-32	NA	123741665	123723983	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_123726992_123727475_123727596_123728132_123728263_123729125_123729215_123729614_123729826_123730486_123730986_123741548
H1_mix_00014916	chr11	-	3943	8	NNC	ENSG00000166261.11	novel	4435	9	NA	NA	-5	-169	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_6	44.1407766500014	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAAGTTCCCTGGTTTCTG	-31	True	NA	-3	True	AATAAA	-18	NA	123741680	123724345	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_123726992_123727475_123727596_123728132_123728263_123729125_123729215_123729614_123729826_123730490_123730986_123740416_123740537_123741548
H1_mix_00014918	chr11	-	3797	7	NNC	ENSG00000166261.11	novel	3384	7	NA	NA	11	-164	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_5	36.2705880232945	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCCTGGTTTCTGGGACT	0	True	NA	2	True	AATAAA	-23	NA	123741649	123724340	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_123726992_123727475_123727596_123728132_123728263_123729125_123729215_123729614_123729826_123730490_123730986_123741548
H1_mix_00014923	chr11	-	2046	5	NIC	ENSG00000120458.13	novel	2495	4	NA	NA	230	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_3	62.8191849676514	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGCGTACTAGTTGAGC	532	False	NA	NA	False	ATTAAA	-14	NA	124800134	124766497	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_124768029_124772993_124773055_124774718_124774819_124779049_124779140_124799870
H1_mix_00014924	chr11	-	2384	4	FSM	ENSG00000120458.13	ENST00000374979.8	2384	4	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_3	60.4281023659982	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGCGTACTAGTTGAGC	-8	True	NA	NA	False	ATTAAA	-14	NA	124800406	124766497	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_124768029_124772993_124773055_124774718_124774975_124799870
H1_mix_00014927	chr11	-	6605	1	FSM	ENSG00000279342.2	ENST00000638898.1	3579	1	-1036	-1990	-1036	1990	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCCGTGTTGCGCCTCGTG	6812	False	NA	NA	False	NA	NA	NA	124793854	124787249	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_124787200_124793900
H1_mix_00014928	chr11	-	2059	3	FSM	ENSG00000285825.2	ENST00000655771.1	2052	3	0	-7	0	7	multi-exon	FALSE	canonical	1	2	junction_1	4.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCTAGTTATAATCACTTA	24	False	NA	-19	True	AATAAA	-11	NA	124953966	124949197	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_124950560_124951338_124951551_124953481
H1_mix_00014929	chr11	-	3787	5	FSM	ENSG00000150433.10	ENST00000682305.1	3805	5	0	18	0	-18	multi-exon	FALSE	canonical	3	53	junction_3	31.5792653492763	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGATTCTAATGATCATT	-15	True	NA	NA	False	AAAAAG	-15	NA	125111626	125094406	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_125097741_125101200_125101304_125102131_125102318_125102733_125102810_125111538
H1_mix_00014930	chr11	-	1828	5	FSM	ENSG00000150433.10	ENST00000531909.5	1828	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	42.6321474945844	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTTTTACAACGGTCTC	20	True	NA	NA	False	NA	NA	NA	125111708	125096544	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_125097741_125101200_125101304_125102131_125102318_125102636_125102810_125111538
H1_mix_00014931	chr11	-	1449	5	NIC	ENSG00000150433.10	novel	3805	5	NA	NA	-13	241	combination_of_known_junctions	FALSE	canonical	3	27	junction_4	41.811332195949	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGTATATTCTCAACATCA	7	True	NA	NA	False	NA	NA	NA	125111721	125096793	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_125097741_125101200_125101304_125102131_125102318_125102733_125102810_125111584
H1_mix_00014937	chr11	-	1053	2	FSM	ENSG00000149557.14	ENST00000366139.3	1053	2	0	0	0	0	multi-exon	FALSE	canonical	3	725	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGGTGATGTGGCCTTTG	-25	True	NA	NA	False	AGTAAA	-8	NA	125496277	125488926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_125489823_125496120
H1_mix_00014939	chr11	-	5965	1	Genic_Genomic	ENSG00000134940.14	novel	NA	NA	NA	NA	9075	5730	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATTAGAGACTATCATGAA	9135	False	NA	NA	False	AAAAAG	-37	NA	125671756	125665791	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr11_-_125665800_125671800
H1_mix_00014940	chr11	-	1364	4	NNC	ENSG00000110060.9	novel	1829	4	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	29.8477618740315	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGATTTGTTGTGTTTTTC	21	False	NA	-4	True	ATTAAA	-18	NA	125903187	125893484	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_125894287_125895669_125895790_125895906_125896331_125903169
H1_mix_00014941	chr11	-	1829	4	FSM	ENSG00000110060.9	ENST00000227474.8	1829	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	22.4845626053867	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGATTTGTTGTGTTTTTC	2	True	NA	-4	True	ATTAAA	-18	NA	125903206	125893484	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_125894287_125895223_125895790_125895906_125896331_125903169
H1_mix_00014942	chr11	-	1420	3	FSM	ENSG00000110060.9	ENST00000613398.4	1419	3	0	-1	0	0	multi-exon	FALSE	canonical	3	26	junction_2	46	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGATTTGTTGTGTTTTTC	-13	True	NA	-4	True	ATTAAA	-18	NA	125903221	125893484	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_125894287_125895223_125895790_125903169
H1_mix_00014946	chr11	-	2557	9	FSM	ENSG00000064309.16	ENST00000684167.1	2891	9	0	334	0	-334	multi-exon	TRUE	canonical	3	3	junction_6	10.6624340560681	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAAAAGAAGAATATTTTA	NA	False	NA	NA	False	NA	NA	NA	126022002	126001718	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_126001851_126003901_126004077_126005758_126006058_126010340_126010695_126015240_126015511_126017087_126017376_126018336_126018474_126019618_126019766_126021247
H1_mix_00014948	chr11	-	1404	4	FSM	ENSG00000165526.9	ENST00000530903.1	1404	4	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_2	7.25718035235908	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACAGGACTCTGCTAACT	5143	False	NA	NA	False	NA	NA	NA	126206512	126203321	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_126203658_126204230_126204329_126205467_126205613_126205687
H1_mix_00014949	chr11	-	544	5	FSM	ENSG00000165526.9	ENST00000534393.5	579	5	35	0	35	0	multi-exon	FALSE	canonical	1	2	junction_4	89.3570786227929	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAAGTGCGGCGCAGCCG	283	False	NA	NA	False	NA	NA	NA	126211372	126205570	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_126205613_126205687_126205782_126209520_126209723_126210889_126211056_126211332
H1_mix_00014951	chr11	-	2986	14	FSM	ENSG00000182934.12	ENST00000332118.11	2986	14	0	0	0	0	multi-exon	TRUE	canonical	1	101	junction_10	71.2001097000684	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTTTAGGTCTTGGAG	23	False	126268918	-28	True	AATAAA	-14	NA	126268895	126262937	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_126264045_126264190_126264290_126264375_126264540_126264958_126265173_126265267_126265441_126265736_126265824_126265962_126266082_126266186_126266279_126266475_126266630_126266762_126266923_126267174_126267336_126267548_126267713_126268002_126268087_126268687
H1_mix_00014952	chr11	-	2453	13	FSM	ENSG00000182934.12	ENST00000532259.1	2453	13	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_12	115.097301831489	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAGGTCCCCAGGACCT	NA	False	NA	NA	False	NA	NA	NA	126268982	126263473	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_126264045_126264190_126264290_126264375_126264540_126264958_126265173_126265267_126265441_126265736_126265824_126265962_126266082_126266186_126266279_126266475_126266630_126266762_126266923_126267174_126267336_126267548_126267713_126268687
H1_mix_00014957	chr11	-	5139	10	FSM	ENSG00000134954.14	ENST00000392668.8	5139	10	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	11.0732688918231	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGGCTTTGGCTTGAT	0	True	NA	-7	True	ATTAAA	-22	NA	128587558	128458764	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_128462577_128463508_128463628_128480190_128480452_128484822_128485072_128486068_128486147_128489289_128489491_128490456_128490577_128556290_128556436_128573061_128573145_128587487
H1_mix_00014958	chr11	-	2231	8	FSM	ENSG00000134954.14	ENST00000319397.6	2231	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_7	19.1673617146972	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTCTTAAAAATCGT	-41	True	NA	-30	True	ATTAAA	-14	NA	128522304	128461765	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_128462577_128463508_128463628_128480190_128480452_128484822_128485072_128486068_128486147_128489289_128489491_128490456_128490577_128521912
H1_mix_00014959	chr11	-	655	4	FSM	ENSG00000134954.14	ENST00000525404.5	655	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	41.3306450738701	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATCTTATATTTTTATTT	62	False	NA	-3	True	AATAAA	-15	NA	128587542	128536411	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_128536784_128556290_128556436_128573061_128573145_128587487
H1_mix_00014961	chr11	-	5289	12	FSM	ENSG00000134909.19	ENST00000527272.1	5289	12	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_9	9.95776203739517	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGACTGTTCTATTTTT	NA	False	NA	-147	True	AATAGA	-22	NA	128998458	128968868	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_128971160_128972452_128973433_128974123_128975003_128976562_128976635_128978769_128978916_128980552_128980749_128981415_128981562_128981828_128981937_128986002_128986086_128986523_128986669_128988022_128988126_128998318
H1_mix_00014962	chr11	-	8194	19	FSM	ENSG00000134909.19	ENST00000524655.5	8194	19	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_7	12.2227272622928	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTCCCCTTCCCTGCT	NA	False	NA	-41	True	AATAAA	-17	NA	129164345	128968762	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_128975003_128976562_128976635_128978769_128978916_128980552_128980749_128981415_128981562_128981828_128981937_128986002_128986086_128986523_128986669_128988022_128988126_128998318_128998469_129040927_129041010_129062279_129062358_129063901_129064025_129064840_129064934_129066730_129066869_129093620_129093708_129123445_129123531_129124802_129124895_129164318
H1_mix_00014963	chr11	-	401	2	FSM	ENSG00000134909.19	ENST00000534357.1	401	2	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTTTAATTTTGTATT	NA	False	NA	NA	False	NA	NA	NA	128981554	128980486	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_128980749_128981415
H1_mix_00014965	chr11	-	4043	2	NNC	ENSG00000134909.19	novel	719	7	NA	NA	-297	-166938	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTTACTTTTTCCATTA	9	True	NA	NA	False	AATATA	-2	NA	129279621	129233681	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_129237249_129279145
H1_mix_00014966	chr11	-	5253	28	NIC	ENSG00000170322.15	novel	5173	27	NA	NA	9	0	combination_of_known_junctions	TRUE	canonical	3	21	junction_25	42.6833814996121	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTGTT	-5	True	NA	-4	True	AGTAAA	-18	NA	129895569	129863635	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_129864851_129864965_129865102_129865876_129865984_129869493_129870262_129872883_129873097_129873744_129874016_129874112_129874334_129874500_129874581_129874792_129874917_129875356_129875464_129876720_129876896_129877324_129877386_129878308_129878356_129878463_129878544_129881442_129881509_129881726_129881854_129882085_129882195_129882450_129882632_129883121_129883207_129884069_129884144_129884744_129884847_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129893296_129893386_129894358_129894439_129895495
H1_mix_00014968	chr11	-	4685	27	NNC	ENSG00000170322.15	novel	5173	27	NA	NA	4	-137	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_4	36.850188473501	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATTTGTGTTTGTATTAT	1127	False	NA	-2	True	AATAAA	-24	NA	129894437	129863772	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_129864851_129864965_129865102_129865876_129865984_129869493_129869913_129870179_129870262_129872883_129873097_129873744_129874016_129874112_129874334_129874500_129874581_129874792_129874917_129875356_129875464_129876720_129876896_129877324_129877386_129878308_129878356_129878463_129878544_129881442_129881509_129881726_129881854_129882085_129882195_129882450_129882632_129883121_129883207_129884069_129884144_129884744_129884847_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129894358
H1_mix_00014969	chr11	-	5080	27	NIC	ENSG00000170322.15	novel	5173	27	NA	NA	3	-137	combination_of_known_splicesites	FALSE	canonical	1	1	junction_26	47.4570500308767	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATTTGTGTTTGTATTAT	1126	False	NA	-2	True	AATAAA	-24	NA	129894438	129863772	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_129864851_129864965_129865102_129865876_129865984_129869493_129870262_129872883_129873097_129873744_129874016_129874112_129874334_129874500_129874581_129874792_129874917_129875356_129875464_129876720_129876896_129877324_129877386_129878308_129878356_129878463_129878544_129881442_129881509_129881726_129881854_129882085_129882195_129882450_129882632_129883121_129883207_129884069_129884144_129884744_129884883_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129893061_129893153_129894358
H1_mix_00014970	chr11	-	4775	28	NNC	ENSG00000170322.15	novel	4114	27	NA	NA	3	-137	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_26	47.4536811201392	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATTTGTGTTTGTATTAT	1126	False	NA	-2	True	AATAAA	-24	NA	129894438	129863772	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_129864851_129864965_129865102_129865876_129865984_129869493_129869913_129870179_129870262_129872883_129873097_129873744_129874016_129874112_129874334_129874500_129874581_129874792_129874917_129875356_129875464_129876720_129876896_129877324_129877386_129878308_129878356_129878463_129878544_129881442_129881509_129881726_129881854_129882085_129882195_129882450_129882632_129883121_129883207_129884069_129884144_129884744_129884847_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129893296_129893386_129894358
H1_mix_00014971	chr11	-	5056	27	NIC	ENSG00000170322.15	novel	5173	27	NA	NA	-8	-140	combination_of_known_junctions	FALSE	canonical	3	50	junction_21	32.4463371260826	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCAATTTGTGTTTGTAT	-1	True	NA	-5	True	AATAAA	-21	NA	129895565	129863775	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_129864851_129864965_129865102_129865876_129865984_129869493_129870262_129872883_129873097_129873744_129874016_129874112_129874334_129874500_129874581_129874792_129874917_129875356_129875464_129876720_129876896_129877324_129877386_129878308_129878356_129878463_129878544_129881442_129881509_129881726_129881854_129882085_129882195_129882450_129882632_129883121_129883207_129884069_129884144_129884744_129884883_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129894358_129894439_129895495
H1_mix_00014973	chr11	-	933	6	FSM	ENSG00000170322.15	ENST00000530278.5	895	6	7	-45	1	45	multi-exon	FALSE	canonical	3	37	junction_5	59.6033556102339	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACCTGAAAACTCCTTTAG	-19	True	NA	NA	False	NA	NA	NA	129895583	129884698	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_129884883_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129895495
H1_mix_00014976	chr11	-	6309	21	FSM	ENSG00000170325.16	ENST00000360871.8	6305	21	0	-4	0	-1	multi-exon	FALSE	canonical	3	20	junction_16	6.13269924258479	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTATTTTTTTTTCTTTGA	3	True	NA	3	True	AATAAA	-43	NA	130002835	129899706	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_129902517_129905637_129905742_129910475_129910657_129912084_129912226_129914703_129915019_129915659_129915861_129917126_129917238_129918538_129918719_129923247_129923404_129924881_129925230_129931015_129931259_129932101_129932232_129935100_129935219_129937597_129937671_129942425_129942630_129944770_129945013_129947144_129947371_129955511_129955572_129957745_129957911_129960895_129961083_130002721
H1_mix_00014979	chr11	-	9758	6	FSM	ENSG00000196323.14	ENST00000527478.6	9755	6	13	-16	13	16	multi-exon	FALSE	canonical	3	12	junction_1	14.2884568795934	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATTGTTTGCTGGGCGGC	-2	True	NA	1	True	AATAAA	-18	NA	130314895	130226660	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_130234274_130236792_130237094_130238443_130238608_130239811_130239897_130260855_130261930_130314374
H1_mix_00014980	chr11	-	7401	8	FSM	ENSG00000196323.14	ENST00000357899.9	7399	8	0	-2	0	2	multi-exon	FALSE	canonical	3	12	junction_3	14.1896771906732	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTGTTGTTATTTATT	21	False	130314938	-13	True	AATAAA	-4	NA	130314917	130226674	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_130231716_130233307_130233383_130234155_130234274_130236792_130237094_130238443_130238608_130239811_130239897_130260855_130261930_130314374
H1_mix_00014989	chr11	-	5956	7	FSM	ENSG00000183715.14	ENST00000331898.11	6833	7	562	315	-17	-311	multi-exon	FALSE	canonical	0	0	junction_4	1.7950549357115	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGTGTGCCCATTCTCA	1189	False	NA	NA	False	NA	NA	NA	132943109	132415291	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_132420294_132436085_132436238_132436658_132436780_132437221_132437360_132529060_132529187_132657086_132657320_132942925
H1_mix_00014990	chr11	-	13108	4	Fusion	ENSG00000080854.16_ENSG00000284020.1	novel	904	3	NA	NA	-297	0	multi-exon	FALSE	canonical	1	1	junction_3	4.96655480858378	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTTTCTAATTTTTTT	6140	False	NA	-11	True	AATAAA	-15	NA	133912659	133896437	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr11_-_133909278_133911885_133912008_133912294_133912387_133912605
H1_mix_00014992	chr11	-	584	4	FSM	ENSG00000080854.16	ENST00000533160.1	618	4	34	0	34	0	multi-exon	FALSE	canonical	3	12	junction_2	1.24721912892465	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTCCACACGACTCACCT	9386	False	NA	NA	False	NA	NA	NA	133946258	133937406	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_133937494_133937809_133937962_133944219_133944367_133946060
H1_mix_00014997	chr11	-	961	8	FSM	ENSG00000151500.15	ENST00000392594.7	943	8	1	-19	1	19	multi-exon	FALSE	canonical	3	361	junction_7	523.318804772551	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTGCAGTGGGATACTC	-28	True	NA	1	True	AATAAA	-37	NA	134253369	134248259	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_134248485_134248808_134248960_134249166_134249263_134249827_134249921_134250274_134250344_134251129_134251309_134252839_134252917_134253298
H1_mix_00014998	chr11	-	1324	7	FSM	ENSG00000151500.15	ENST00000341541.8	1304	7	0	-20	0	17	multi-exon	FALSE	canonical	3	1178	junction_1	297.467458537718	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGAGTGCAGTGGGATAC	-11	True	NA	-1	True	AATAAA	-35	NA	134253352	134248261	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_134248485_134248808_134248960_134249166_134249263_134249827_134249921_134250274_134250344_134251129_134251309_134252839
H1_mix_00014999	chr11	-	835	7	FSM	ENSG00000151500.15	ENST00000352327.5	835	7	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_1	539.303563249246	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAAGAACTTTTCTTCTA	-9	True	NA	21	True	AATAAA	-9	NA	134253350	134248287	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_134248485_134249166_134249263_134249827_134249921_134250274_134250344_134251129_134251309_134252839_134252917_134253226
H1_mix_00015000	chr11	-	926	6	FSM	ENSG00000151500.15	ENST00000531135.5	926	6	0	0	0	0	multi-exon	FALSE	canonical	3	1204	junction_5	266.742872444607	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGGTGGCCCCTTAAA	-12	True	NA	NA	False	NA	NA	NA	134253353	134248881	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_134249263_134249827_134249921_134250274_134250344_134251129_134251309_134252839_134252917_134253226
H1_mix_00015006	chr11	-	3822	7	NIC	ENSG00000109956.13	novel	3522	7	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	1.95078331845327	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTTCAGCCCTGCCTTA	394	False	NA	-8	True	ATTAAA	-29	NA	134412233	134378503	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_134380748_134381923_134382025_134382709_134383007_134383679_134384189_134387547_134387695_134387843_134387941_134411806
H1_mix_00015007	chr11	+	318	1	Intergenic	novelGene_223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGGGCAGTGTCAGTCTTC	NA	False	NA	NA	False	GGGGCT	-10	NA	6072763	6073081	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_6072800_6073100
H1_mix_00015008	chr11	+	253	1	Intergenic	novelGene_225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCGGGCATGTTGAGTAA	7191	False	NA	NA	False	NA	NA	NA	7913395	7913648	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_7913400_7913600
H1_mix_00015009	chr11	+	255	1	Intergenic	novelGene_228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCCTCCTCTTGTATCCC	NA	False	NA	NA	False	NA	NA	NA	20570393	20570648	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_20570400_20570600
H1_mix_00015010	chr11	+	274	1	Intergenic	novelGene_229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGCAGCGGCTGCCG	NA	False	NA	NA	False	NA	NA	NA	20571156	20571430	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_20571200_20571400
H1_mix_00015012	chr11	+	232	1	Intergenic	novelGene_239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCAAAAGACCATCTTATT	1844	False	NA	NA	False	NA	NA	NA	42122341	42122573	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_42122300_42122600
H1_mix_00015013	chr11	+	997	1	Intergenic	novelGene_242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGCTTTTGTATTTGAA	NA	False	NA	NA	False	TATAAA	-12	NA	57086494	57087491	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_57086500_57087500
H1_mix_00015014	chr11	+	1057	1	Intergenic	novelGene_243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCGAGAGAAGATGTCATG	6640	False	NA	NA	False	NA	NA	NA	57413475	57414532	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_57413500_57414500
H1_mix_00015015	chr11	+	281	1	Intergenic	novelGene_245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCCTGCTACTATCTGA	NA	False	NA	NA	False	NA	NA	NA	63672486	63672767	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_63672500_63672800
H1_mix_00015016	chr11	+	1813	1	Intergenic	novelGene_246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTATTCCTGTGTGACA	5220	False	NA	9	True	AATAAA	-22	NA	63828141	63829954	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_63828100_63830000
H1_mix_00015017	chr11	+	262	1	Intergenic	novelGene_249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	514	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTTACCATCTCATTAAAA	NA	False	NA	NA	False	NA	NA	NA	67762351	67762613	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_67762400_67762600
H1_mix_00015018	chr11	+	428	1	Intergenic	novelGene_252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAATGAAGTCCATA	NA	False	NA	NA	False	NA	NA	NA	70653161	70653589	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_70653200_70653600
H1_mix_00015023	chr11	+	331	1	Intergenic	novelGene_261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AGAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	117671769	117672100	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_117671800_117672100
H1_mix_00015029	chr11	+	965	4	FSM	ENSG00000177963.15	ENST00000526982.1	965	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	172.080084715099	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGAATGGGGCTTTTTCT	6	True	NA	NA	False	NA	NA	NA	208799	210662	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_208939_209174_209319_209406_210001_210574
H1_mix_00015036	chr11	+	3900	12	NIC	ENSG00000142102.16	novel	3699	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	146	junction_5	65.6012245400726	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCCTCTGAGGAGCCGC	10	True	NA	18	True	ATTAAA	-22	NA	289134	295676	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_290076_290389_291114_291975_292096_292545_292678_292885_292998_293162_293236_293365_293503_293593_293728_293829_293926_294098_294197_294266_294479_294555
H1_mix_00015037	chr11	+	4427	11	FSM	ENSG00000142102.16	ENST00000474221.5	4418	11	-9	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	89.6069193756821	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTCTGAGGAGCCGCTG	1	True	NA	20	True	ATTAAA	-24	NA	289125	295678	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_289240_289803_290076_290389_290601_290677_292096_292545_292678_292885_293503_293593_293728_293829_293926_294098_294197_294266_294479_294555
H1_mix_00015038	chr11	+	3761	13	NIC	ENSG00000142102.16	novel	3699	14	NA	NA	1	-7	intron_retention	FALSE	canonical	3	23	junction_11	85.1203396505337	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGCATTATTCCTCTGAG	11	True	NA	11	True	ATTAAA	-15	NA	289135	295669	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_290076_290389_290601_290677_291114_291975_292096_292545_292678_292885_292998_293162_293236_293365_293503_293593_293728_293829_293926_294098_294197_294320_294479_294555
H1_mix_00015039	chr11	+	2879	8	FSM	ENSG00000142102.16	ENST00000476372.1	2879	8	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_3	61.1728898204065	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGGAGCCGCTGTGCTT	2048	False	NA	25	True	ATTAAA	-29	NA	291559	295683	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_292096_292545_292678_292885_292998_293162_293728_293829_293926_294098_294197_294266_294479_294555
H1_mix_00015040	chr11	+	2516	10	ISM	ENSG00000142102.16	ENST00000409548.7	3699	14	2569	431	135	0	3prime_fragment	FALSE	canonical	3	146	junction_3	67.5635960127408	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCCTCTGAGGAGCCGC	2183	False	NA	18	True	ATTAAA	-22	NA	291694	295676	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_292096_292545_292678_292885_292998_293162_293236_293365_293503_293593_293728_293829_293926_294098_294197_294266_294479_294555
H1_mix_00015041	chr11	+	2647	9	NIC	ENSG00000142102.16	novel	3062	13	NA	NA	176	0	intron_retention	FALSE	canonical	3	173	junction_3	58.2740025654665	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGGAGCCGCTGTGCTT	2224	False	NA	25	True	ATTAAA	-29	NA	291735	295683	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_292096_292545_292678_292885_293236_293365_293503_293593_293728_293829_293926_294098_294197_294266_294479_294555
H1_mix_00015042	chr11	+	861	3	FSM	ENSG00000185885.17	ENST00000328221.5	844	3	-17	0	4	0	multi-exon	FALSE	canonical	2	7	junction_1	5933	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGTCATTCAATAAAGTGC	-4	True	NA	-6	True	NA	NA	NA	313509	315240	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_313692_313996_314357_314921
H1_mix_00015043	chr11	+	804	3	FSM	ENSG00000185885.17	ENST00000679765.1	804	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	381.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTGTGACTTCATCTG	11	True	NA	26	True	AATAAA	-17	NA	314039	315272	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_314357_314673_314810_314921
H1_mix_00015044	chr11	+	350	1	FSM	ENSG00000270972.1	ENST00000605240.1	497	1	-8	155	-8	-155	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGACTGCTGAACCCACTT	3466	False	NA	NA	False	NA	NA	NA	333183	333533	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_333200_333500
H1_mix_00015045	chr11	+	960	4	FSM	ENSG00000184363.10	ENST00000528036.5	940	4	-20	0	-20	0	multi-exon	TRUE	canonical	3	44	junction_1	99.4786409235671	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCGGGTGAGCGGCTGGG	685	False	NA	NA	False	NA	NA	NA	394124	397438	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_394184_394328_394525_396607_396688_396813
H1_mix_00015046	chr11	+	532	3	FSM	ENSG00000184363.10	ENST00000526971.1	532	3	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	18.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCCACGATGGGTTGGGG	365	False	NA	NA	False	NA	NA	NA	397629	400260	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_397663_398991_399197_399966
H1_mix_00015047	chr11	+	439	4	FSM	ENSG00000174915.12	ENST00000532614.5	437	4	-2	0	-2	0	multi-exon	FALSE	canonical	2	6	junction_1	131.317257899418	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCTTTCACAACATCTGG	NA	False	NA	NA	False	NA	NA	NA	448265	487053	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_448420_460186_460289_479084_479153_486938
H1_mix_00015052	chr11	+	2017	6	FSM	ENSG00000099849.15	ENST00000397583.8	2017	6	0	0	0	0	multi-exon	FALSE	canonical	1	28	junction_1	207.037194725972	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGGAGGCTGCGCT	-33	True	NA	27	True	AATAAA	-19	NA	560969	564025	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_561478_561761_561893_562078_562777_563188_563318_563395_563479_563557
H1_mix_00015053	chr11	+	1439	5	NIC	ENSG00000099849.15	novel	2017	6	NA	NA	15	-6	combination_of_known_junctions	FALSE	canonical	3	87	junction_4	159.164223366936	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCCCGAAGCAGCTTGAG	-1	True	NA	8	True	NA	NA	NA	561001	564006	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_561034_561761_561893_562078_562777_563188_563318_563557
H1_mix_00015056	chr11	+	6050	17	ISM	ENSG00000070047.13	ENST00000264555.10	5539	18	0	40	0	-40	intron_retention	FALSE	canonical	3	151	junction_2	34.8846312865709	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTCTGAATTAGGAATAT	-6	True	NA	-29	True	GATAAA	-40	NA	576469	612182	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_576593_581491_581607_581961_582082_587258_587465_591383_591468_592558_592675_596922_597021_597394_597571_598372_598503_601573_601702_605118_605301_605604_605725_606441_606597_607065_609721_610195_610348_610500_610762_610953
H1_mix_00015059	chr11	+	5178	3	ISM	ENSG00000177042.16	ENST00000492023.1	2047	5	-251	-8	-40	0	intron_retention	FALSE	canonical	3	68	junction_1	28.5	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCCTAATTATGGCCACC	152	False	NA	22	True	AATAAA	-23	NA	695550	704129	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_695847_698868_700236_700614
H1_mix_00015061	chr11	+	2569	21	FSM	ENSG00000177106.17	ENST00000650127.1	2554	21	-15	0	0	0	multi-exon	FALSE	canonical	1	6	junction_20	51.7299719698358	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCTAAGCAATTAAACCAG	7	True	NA	-15	True	NA	NA	NA	706200	727692	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_706289_709329_709452_709552_709609_710421_710487_720061_720224_720596_720747_720829_720910_721063_721207_721284_721353_721564_721692_721902_721992_722090_722166_722400_722550_722672_722806_723240_723354_724723_724830_725727_725848_726097_726171_726303_726485_726618_726752_727356
H1_mix_00015062	chr11	+	3867	20	FSM	ENSG00000177106.17	ENST00000526909.5	3844	20	-23	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	57.5669669052518	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGAGCCGTGTGTCTCAG	7	True	NA	14	True	ATTAAA	-14	NA	706200	727721	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_706289_709329_709452_709552_710487_720061_720224_720596_720747_720829_720910_721063_721207_721284_721353_721564_721692_721902_721992_722090_722166_722400_722550_722672_722806_723240_723354_724723_724830_725727_725848_726097_726171_726303_726485_726618_726752_726900
H1_mix_00015071	chr11	+	3011	1	FSM	ENSG00000279672.2	ENST00000623846.1	1139	1	-747	-1125	-747	1125	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCCCTTTCCCAGCGGGG	760	False	NA	NA	False	NA	NA	NA	778869	781880	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_778900_781900
H1_mix_00015072	chr11	+	1828	1	FSM	ENSG00000288675.1	ENST00000678030.1	1680	1	-155	7	-155	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAGAAACAGTGCAGTTT	9379	False	NA	NA	False	AATAAA	-14	NA	797355	799183	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_797400_799200
H1_mix_00015073	chr11	+	824	3	FSM	ENSG00000177685.17	ENST00000527089.5	824	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	26.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGGCCTGGGTGAGCC	1089	False	NA	NA	False	NA	NA	NA	827247	828950	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_827460_828259_828773_828851
H1_mix_00015074	chr11	+	546	2	FSM	ENSG00000177685.17	ENST00000530183.1	530	2	-16	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGGTGAGTCCCCCACC	1121	False	NA	NA	False	NA	NA	NA	827279	828766	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_827319_828259
H1_mix_00015075	chr11	+	627	4	FSM	ENSG00000177685.17	ENST00000534606.1	627	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	29.3295452099452	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCAGGGCCCGTGCTTTGT	1121	False	NA	NA	False	NA	NA	NA	827279	829070	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_827460_828229_828260_828574_828773_828851
H1_mix_00015076	chr11	+	2317	9	NIC	ENSG00000177685.17	novel	2166	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	25	junction_1	84.0148796345028	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCGTCCTCCTGGGCCTT	1121	False	NA	13	True	AATAAA	-14	NA	827279	831985	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_827460_828229_828773_828851_828964_829359_829541_829985_830133_830249_830714_830865_831033_831223_831296_831534
H1_mix_00015077	chr11	+	4267	4	NIC	ENSG00000177685.17	novel	1663	8	NA	NA	1	-3	intron_retention	FALSE	canonical	3	66	junction_2	107.058654743816	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACTGCGTCCTCCTGGGC	1122	False	NA	10	True	AATAAA	-11	NA	827280	831982	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_828773_828851_830133_830249_831296_831534
H1_mix_00015078	chr11	+	1662	8	FSM	ENSG00000177685.17	ENST00000450448.5	1663	8	0	1	0	-1	multi-exon	FALSE	canonical	3	54	junction_2	81.3290118178335	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTCCTGGGCCTTCCGTG	102	False	NA	18	True	AATAAA	-19	NA	828259	831990	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_828773_828851_828964_829359_829541_829985_830133_830249_830338_830620_830714_831223_831296_831534
H1_mix_00015080	chr11	+	915	7	NNC	ENSG00000214063.12	novel	1430	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_1	218.370225890701	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGAGACCCCCACCCT	0	True	NA	NA	False	NA	NA	NA	842811	865825	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_843046_847200_847301_850287_850368_862549_862742_864436_864512_865512_865615_865693
H1_mix_00015081	chr11	+	1344	8	FSM	ENSG00000214063.12	ENST00000397396.5	1332	8	-12	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	251.445453978652	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTATTGCTCGTCTGCCT	0	True	NA	19	True	AATAAA	-19	NA	842811	867116	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_842916_847200_847301_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
H1_mix_00015082	chr11	+	1462	9	FSM	ENSG00000214063.12	ENST00000397404.5	1462	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	217.579259983575	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTATTGCTCGTCTGCCT	18	True	NA	19	True	AATAAA	-19	NA	844445	867116	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_844588_847200_847301_850287_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
H1_mix_00015084	chr11	+	3095	21	FSM	ENSG00000183020.15	ENST00000528815.5	3072	21	-23	0	-3	0	multi-exon	FALSE	canonical	2	28	junction_7	54.9917266504699	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGGCGTGAACGTGGCG	-24	True	NA	29	True	ATTAAA	-11	NA	925876	1010919	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_926089_959436_959506_970168_970312_972061_972256_977094_977225_981197_981300_984644_984754_985431_985583_986784_986954_988551_988690_992502_992686_993283_993382_993753_993986_994071_994246_1003721_1003805_1006527_1006618_1008011_1008136_1009099_1009217_1009327_1009398_1009682_1009818_1010547
H1_mix_00015087	chr11	+	4230	22	NNC	ENSG00000174672.16	novel	3211	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_14	23.0559803802076	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCGACGCAGGTCTTCA	2	True	NA	6	True	AATAAA	-14	NA	1390284	1462685	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_1390376_1436039_1436135_1438305_1438392_1440787_1440929_1442489_1442607_1443105_1443140_1443334_1443404_1443488_1443636_1444970_1445003_1445293_1445459_1445570_1445669_1445756_1445908_1447797_1447864_1449775_1449837_1450220_1450795_1451370_1451420_1454484_1454609_1456347_1456529_1456597_1456688_1456954_1457050_1459191_1459240_1460969
H1_mix_00015089	chr11	+	1842	8	FSM	ENSG00000174672.16	ENST00000544817.5	1842	8	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_6	7.87400787401181	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTAAAATGAAAAAATTGAA	7108	False	NA	NA	False	NA	NA	NA	1450657	1462087	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_1450795_1451370_1451420_1454484_1454609_1456347_1456529_1456597_1456688_1456954_1457050_1459191_1459240_1460969
H1_mix_00015091	chr11	+	659	5	FSM	ENSG00000214026.11	ENST00000462288.5	659	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	593.933708422076	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGCTTCCTTCTTCTCT	215	False	NA	39	True	AATAAA	-29	NA	1947553	1956609	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_1947579_1950898_1951022_1952126_1952210_1952781_1952856_1956255
H1_mix_00015092	chr11	+	695	3	FSM	ENSG00000214026.11	ENST00000466346.1	736	3	0	41	0	-41	multi-exon	FALSE	canonical	3	1402	junction_2	40.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGGTGCCAAGGCAGGT	805	False	NA	NA	False	NA	NA	NA	1950909	1953281	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_1951022_1952126_1952210_1952781
H1_mix_00015093	chr11	+	245	1	FSM	ENSG00000199550.1	ENST00000362680.1	113	1	-170	38	-170	-38	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCCGCCTTCTCACTGCT	NA	False	NA	NA	False	NA	NA	NA	2372467	2372712	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_2372500_2372700
H1_mix_00015094	chr11	+	600	7	FSM	ENSG00000110651.12	ENST00000492252.5	1136	7	536	0	536	0	multi-exon	FALSE	canonical	1	1	junction_1	602.068494626834	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCGGGCGGGGGCGGAG	82	False	NA	NA	False	NA	NA	NA	2386621	2396714	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_2386640_2390411_2390527_2394094_2394193_2394971_2395047_2395415_2395521_2395868_2395971_2396627
H1_mix_00015095	chr11	+	1030	6	FSM	ENSG00000110628.16	ENST00000463571.5	1030	6	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	14.1194900757782	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTCTTCGGCCACGTGCAG	1447	False	NA	NA	False	NA	NA	NA	2916235	2925102	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_2916741_2917987_2918096_2919306_2919408_2922101_2922204_2922435_2922557_2925009
H1_mix_00015097	chr11	+	442	2	FSM	ENSG00000234791.1	ENST00000455154.1	293	2	-100	-49	-100	49	multi-exon	FALSE	canonical	3	6	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAGTCTCATTAATTGGT	NA	False	NA	NA	False	AATACA	-14	NA	3189445	3189978	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_3189619_3189709
H1_mix_00015098	chr11	+	2090	13	NIC	ENSG00000223756.8	novel	1600	12	NA	NA	4	388	combination_of_known_splicesites	FALSE	canonical	3	47	junction_1	28.0114064068352	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGCTGCAGCGGGCTTGG	NA	False	NA	NA	False	NA	NA	NA	3380928	3409369	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_3381045_3383461_3383547_3384166_3384285_3384898_3384969_3397116_3397407_3401758_3401868_3402612_3402730_3402914_3402953_3403592_3403653_3404853_3404964_3406498_3406716_3407621_3407698_3408685
H1_mix_00015099	chr11	+	1618	13	NIC	ENSG00000223756.8	novel	1600	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_10	37.3254269901899	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAAGCTGTGCTTGGCTCT	32	False	NA	22	True	AATGAA	-16	NA	3380992	3408976	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_3381045_3383461_3383547_3384166_3384285_3384898_3384969_3397116_3397407_3401758_3401868_3402612_3402730_3402914_3402953_3403592_3403653_3404853_3404964_3406495_3406698_3407621_3407698_3408685
H1_mix_00015100	chr11	+	5631	1	NIC	ENSG00000223756.8	novel	2337	9	NA	NA	-8236	1063	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCCTGTTTGGTGGTAT	NA	False	NA	16	True	AATAAA	-18	NA	3393522	3399153	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_3393500_3399200
H1_mix_00015101	chr11	+	1160	3	FSM	ENSG00000287312.1	ENST00000656923.1	1173	3	-7	20	-7	-20	multi-exon	FALSE	canonical	2	6	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATTGTGCCTGTTTTGAC	NA	False	NA	43	True	ACTAAA	-6	NA	3511551	3520866	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_3512281_3515425_3515598_3520607
H1_mix_00015103	chr11	+	841	7	FSM	ENSG00000148985.20	ENST00000464261.5	830	7	-11	0	1	0	multi-exon	FALSE	canonical	3	13	junction_5	107.179625966049	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGTTGTCTTAACCAAC	-4	True	NA	NA	False	NA	NA	NA	3797913	3825354	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_3797983_3808293_3808316_3811249_3811425_3823882_3824136_3824269_3824456_3825019_3825129_3825327
H1_mix_00015104	chr11	+	1271	8	FSM	ENSG00000148985.20	ENST00000464906.6	1259	8	-12	0	1	0	multi-exon	FALSE	canonical	1	3	junction_3	106.898960495891	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAAGAAGCTGAGCTGGC	-4	True	NA	NA	False	NA	NA	NA	3797913	3825680	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_3797983_3808293_3808316_3811249_3811425_3817352_3817536_3823882_3824136_3824269_3824377_3825019_3825129_3825327
H1_mix_00015109	chr11	+	1627	6	NIC	ENSG00000148985.20	novel	894	6	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	110.98216072865	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGCCTAGGCTTGCTAG	24	True	NA	18	True	AATAAA	-18	NA	3808591	3826352	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_3808652_3822908_3822994_3823882_3824136_3824269_3824365_3825019_3825129_3825327
H1_mix_00015111	chr11	+	1834	7	NIC	ENSG00000148985.20	novel	1798	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	106.324451039678	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGGAAAATAAATTTTTT	2699	False	NA	-13	True	NA	NA	NA	3811266	3826321	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_3811425_3822908_3822994_3823612_3823741_3823882_3824136_3824269_3824377_3825019_3825129_3825327
H1_mix_00015113	chr11	+	549	3	FSM	ENSG00000167325.15	ENST00000532710.5	549	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	511.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTCTCCCATGGTGGCCA	13	True	NA	NA	False	CATAAA	-16	NA	4094706	4107480	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_4095032_4106045_4106224_4107434
H1_mix_00015114	chr11	+	637	4	FSM	ENSG00000167325.15	ENST00000531591.5	639	4	0	2	0	-2	multi-exon	FALSE	canonical	3	838	junction_3	40.4749579644281	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTAGTCTGTCTCATTTG	48	False	NA	NA	False	AATAAA	-16	NA	4121674	4126947	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_4121766_4122140_4122221_4123182_4123385_4126683
H1_mix_00015116	chr11	+	3437	7	ISM	ENSG00000121236.21	ENST00000278302.9	3217	8	-5	0	-5	0	intron_retention	FALSE	canonical	1	51	junction_3	37.3080271374525	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTCATTTTACTTTTT	-9	True	NA	7	True	AATAAA	-18	NA	5596103	5612952	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_5596182_5603245_5603736_5604533_5604630_5605336_5605568_5608371_5608395_5610144_5610246_5610534
H1_mix_00015117	chr11	+	1275	8	NNC	ENSG00000121236.21	novel	3217	8	NA	NA	-3	-74	intron_retention	FALSE	canonical	1	19	junction_2	50.8659703414327	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTCAAAATCACAGTGCTTA	13	False	NA	NA	False	NA	NA	NA	5596125	5611030	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_5596182_5603245_5603736_5604536_5604630_5605336_5605568_5608371_5608395_5610144_5610246_5610534_5610562_5610776
H1_mix_00015119	chr11	+	850	5	FSM	ENSG00000132274.16	ENST00000425490.5	812	5	-38	0	-38	0	multi-exon	FALSE	canonical	1	1	junction_1	56.7599110288239	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGAGGAAGGTGAGGTGA	19	False	NA	NA	False	AATGAA	-45	NA	5689658	5698406	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_5689705_5689772_5689900_5696166_5696656_5697247_5697344_5698314
H1_mix_00015122	chr11	+	2898	4	FSM	ENSG00000132274.16	ENST00000493494.1	460	4	-2308	-130	-2308	0	multi-exon	FALSE	canonical	3	129	junction_2	14.9740516301441	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTCTTTATGGCTGTGCC	3636	False	NA	NA	False	AATATA	-42	NA	5704241	5709447	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_5706617_5708172_5708274_5708576_5708604_5709052
H1_mix_00015123	chr11	+	1226	4	NIC	ENSG00000166311.10	novel	1344	4	NA	NA	126	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	5.43650214343336	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGACTCCAGACCCCTGTG	327	False	NA	-2	True	AATAAA	-11	NA	6392002	6394986	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_6392197_6393616_6393694_6393895_6394042_6394177
H1_mix_00015132	chr11	+	241	1	FSM	ENSG00000254781.1	ENST00000533934.1	2194	1	520	1433	520	-1433	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCATATTCATGAACTCTT	NA	False	NA	NA	False	AAGAAA	-30	NA	6748650	6748891	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_6748600_6748900
H1_mix_00015133	chr11	+	1510	8	FSM	ENSG00000149054.16	ENST00000610573.4	1503	8	-7	0	-7	0	multi-exon	FALSE	canonical	2	7	junction_7	21.1650462714701	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGATTAGAGGCACCCAC	NA	False	NA	NA	False	NA	NA	NA	6926415	6984238	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_6926686_6927661_6927808_6932093_6932673_6941570_6941654_6943082_6943216_6943545_6943642_6955689_6955783_6984128
H1_mix_00015134	chr11	+	2158	7	FSM	ENSG00000149054.16	ENST00000636097.1	2150	7	-8	0	-7	0	multi-exon	FALSE	canonical	1	5	junction_1	30.5122926047847	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAGAACACAAGGTCAGGA	NA	False	NA	NA	False	NA	NA	NA	6926415	6988930	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_6926862_6927661_6927808_6932093_6932673_6941570_6941654_6943545_6943642_6955689_6955783_6988215
H1_mix_00015135	chr11	+	3159	2	ISM	ENSG00000149054.16	ENST00000636606.1	2204	7	36	70450	0	-25551	5prime_fragment	FALSE	canonical	3	18	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCCCTACTCTGTGCGC	21	True	NA	NA	False	ATTAAA	-25	NA	6926462	6930554	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_6926729_6927661
H1_mix_00015136	chr11	+	1806	8	NIC	ENSG00000149054.16	novel	1503	8	NA	NA	31	-4	combination_of_known_junctions	FALSE	canonical	2	7	junction_7	24.5988219396037	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAATCTGCCCATGATTT	17	True	NA	NA	False	GATAAA	-12	NA	6926552	6984628	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_6926729_6927661_6927808_6932093_6932673_6941570_6941654_6943082_6943216_6943545_6943642_6955689_6955783_6984128
H1_mix_00015137	chr11	+	239	2	FSM	ENSG00000166387.14	ENST00000530189.1	320	2	0	81	0	-81	multi-exon	FALSE	canonical	3	43	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAAGCTCAGACCTGGGA	375	False	NA	NA	False	NA	NA	NA	7597586	7610442	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_7597674_7610290
H1_mix_00015142	chr11	+	1816	2	FSM	ENSG00000166387.14	ENST00000529664.1	1841	2	25	0	25	0	multi-exon	FALSE	canonical	3	254	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATATCTTTAACTTTGTTG	NA	False	NA	41	True	AATAAA	-32	NA	7650773	7653768	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_7651845_7653023
H1_mix_00015143	chr11	+	1792	3	Antisense	novelGene_ENSG00000279000.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	2.5	88	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGTCTCGGGTATTTC	236	False	NA	13	True	AATAAA	-19	NA	7906440	7935975	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr11_+_7906667_7907161_7907336_7934583
H1_mix_00015145	chr11	+	3537	4	FSM	ENSG00000166452.12	ENST00000525005.5	1128	4	-78	-2331	-25	0	multi-exon	FALSE	canonical	3	111	junction_1	69.5317673201729	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAATTCATTTTTATTAAG	-8	True	NA	14	True	AATAAA	-17	NA	8911113	8920079	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_8911672_8912452_8912534_8914825_8914931_8917286
H1_mix_00015148	chr11	+	210	2	Intergenic	novelGene_226	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	48	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTTCTGCCCGGCCGCCCC	NA	False	NA	NA	False	NA	NA	NA	8978465	8978950	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_8978542_8978816
H1_mix_00015154	chr11	+	417	2	FSM	ENSG00000246273.8	ENST00000527406.1	666	2	-7	256	-5	-256	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGGTAAATCAGTTCC	-18	True	NA	NA	False	NA	NA	NA	9758286	9780575	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_9758504_9780375
H1_mix_00015155	chr11	+	3695	2	FSM	ENSG00000246273.8	ENST00000663578.1	3714	2	19	0	-5	0	multi-exon	FALSE	canonical	3	10	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCTGAACACAAAATAAAAG	-18	True	NA	-28	True	NA	NA	NA	9758286	9811325	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_9758504_9807847
H1_mix_00015157	chr11	+	1840	2	FSM	ENSG00000148926.10	ENST00000530439.1	1839	2	-1	0	0	0	multi-exon	FALSE	canonical	3	351	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCGAACAGCAAACCAATAAA	-2	True	NA	-1	True	CATAAA	-12	NA	10305072	10307362	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_10305230_10305679
H1_mix_00015158	chr11	+	1640	3	FSM	ENSG00000148926.10	ENST00000534464.1	1640	3	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_2	0.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCATTCTCTCGGCTCGG	-2	True	NA	32	True	AATAAA	-14	NA	10305072	10307395	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_10305230_10305679_10306099_10306331
H1_mix_00015160	chr11	+	4137	15	FSM	ENSG00000133805.16	ENST00000396554.7	3806	15	-223	-108	137	108	multi-exon	FALSE	canonical	2	6	junction_7	2.87139303460597	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAATTTCTTTTGGCAACT	48	False	NA	8	True	AATAAA	-19	NA	10450457	10507126	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_10451044_10461514_10461741_10478525_10478731_10482062_10482226_10484819_10485040_10487234_10487365_10493348_10493544_10494898_10495031_10495569_10495734_10496811_10496939_10500085_10500250_10501469_10501591_10502720_10502895_10504548_10504660_10505707
H1_mix_00015161	chr11	+	3586	15	FSM	ENSG00000133805.16	ENST00000396553.7	4189	15	150	453	7	108	multi-exon	FALSE	canonical	0	0	junction_1	3.9357078039874	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAATTTCTTTTGGCAACT	12	True	NA	8	True	AATAAA	-19	NA	10455413	10507126	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_10455449_10461514_10461741_10478525_10478731_10482062_10482226_10484819_10485040_10487234_10487365_10493348_10493544_10494898_10495031_10495569_10495734_10496811_10496939_10500085_10500250_10501469_10501591_10502720_10502895_10504548_10504660_10505707
H1_mix_00015162	chr11	+	902	8	FSM	ENSG00000198730.9	ENST00000524523.1	902	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	83.9450743653496	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATTTATCGAGGTGACA	147	False	NA	NA	False	NA	NA	NA	10751451	10763734	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_10751458_10752671_10752771_10754957_10755198_10755677_10755796_10756748_10756839_10760172_10760322_10763430_10763539_10763642
H1_mix_00015166	chr11	+	593	2	FSM	ENSG00000133816.18	ENST00000533389.1	593	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGAACTTGCCTACCTGG	918	False	NA	NA	False	NA	NA	NA	12161867	12204290	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_12162420_12204249
H1_mix_00015167	chr11	+	313	2	FSM	ENSG00000133816.18	ENST00000525075.1	575	2	0	262	0	3	multi-exon	FALSE	canonical	3	7	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACCCCAGGGGCCAGGGC	NA	False	NA	NA	False	NA	NA	NA	12239459	12256971	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_12239586_12256784
H1_mix_00015168	chr11	+	9264	12	NIC	ENSG00000187079.20	novel	9417	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	10.5470218271078	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTTTATCTGCAGAAGT	1	True	NA	19	True	AATAAA	-21	NA	12674420	12944737	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_12674835_12764178_12764435_12862249_12862315_12864837_12864901_12879707_12879843_12881004_12881052_12881895_12881958_12883000_12883126_12901939_12902114_12924911_12925053_12930173_12930327_12937108
H1_mix_00015170	chr11	+	2792	20	FSM	ENSG00000133794.20	ENST00000389707.8	2776	20	-21	5	-1	0	multi-exon	TRUE	canonical	3	12	junction_2	13.9895093263179	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATACTGTTCACATTTC	-48	True	NA	NA	False	AATAAA	-16	NA	13277776	13387261	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_13277924_13309986_13310060_13326412_13326468_13349944_13350071_13354300_13354449_13356738_13356778_13357054_13357097_13358433_13358592_13360344_13360425_13365499_13365593_13366664_13366783_13369617_13369768_13372165_13372410_13374094_13374202_13375611_13375763_13376639_13376729_13378336_13378446_13381160_13381255_13385688_13385792_13386595
H1_mix_00015171	chr11	+	2741	19	FSM	ENSG00000133794.20	ENST00000403510.8	2728	19	-13	0	-1	0	multi-exon	FALSE	canonical	3	28	junction_11	9.52854710207927	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATACTGTTCACATTTCA	-48	True	NA	NA	False	AATAAA	-17	NA	13277776	13387262	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_13277924_13309986_13310060_13349944_13350071_13354300_13354449_13356738_13356778_13357054_13357097_13358433_13358592_13360344_13360425_13365499_13365593_13366664_13366783_13369617_13369768_13372162_13372410_13374094_13374202_13375611_13375763_13376639_13376729_13378336_13378446_13381160_13381255_13385688_13385792_13386595
H1_mix_00015172	chr11	+	2800	20	FSM	ENSG00000133794.20	ENST00000403290.6	2787	20	-13	0	-1	0	multi-exon	FALSE	canonical	3	12	junction_2	13.2913234773063	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGTTCACATTTCAAATA	-48	True	NA	NA	False	AATAAA	-21	NA	13277776	13387266	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_13277924_13309986_13310060_13326412_13326468_13349944_13350071_13354300_13354449_13356738_13356778_13357054_13357097_13358433_13358592_13360344_13360425_13365499_13365593_13366664_13366783_13369617_13369768_13372162_13372410_13374094_13374202_13375611_13375763_13376639_13376729_13378336_13378446_13381160_13381255_13385688_13385792_13386595
H1_mix_00015173	chr11	+	1071	8	FSM	ENSG00000197601.13	ENST00000532701.1	1109	8	0	38	0	-38	multi-exon	TRUE	canonical	3	273	junction_6	35.4014873433652	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTTTGAATGTTAGAA	-4	True	NA	NA	False	NA	NA	NA	13668710	13713046	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_13668807_13694758_13694955_13700316_13700493_13707899_13708080_13710692_13710871_13711763_13711809_13711927_13712047_13712965
H1_mix_00015174	chr11	+	447	2	FSM	ENSG00000197601.13	ENST00000532769.1	450	2	3	0	3	0	multi-exon	FALSE	canonical	3	367	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAATTTGTTTTGAATGTG	NA	False	NA	NA	False	ATTAAA	-27	NA	13694758	13700567	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_13694955_13700316
H1_mix_00015176	chr11	+	3208	1	Intergenic	novelGene_227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACATGCTCAGTCAAG	NA	False	NA	NA	False	NA	NA	NA	14269479	14272687	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_14269500_14272700
H1_mix_00015177	chr11	+	5985	5	NNC	ENSG00000254946.2	novel	571	5	NA	NA	-86	4852	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_4	10.9316055545377	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAACACTGGAGCAGTG	-4	True	NA	-2	True	AATAAA	-3	NA	15552768	15595950	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_15552914_15561877_15562229_15585707_15585803_15588546_15589068_15591077
H1_mix_00015179	chr11	+	590	1	FSM	ENSG00000197149.5	ENST00000494359.1	873	1	314	-31	314	31	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGCGTGAAAAAAAAAATTAC	3513	False	NA	NA	False	AATAAA	-9	NA	17228592	17229182	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_17228600_17229200
H1_mix_00015181	chr11	+	2171	14	NIC	ENSG00000070081.18	novel	937	8	NA	NA	9	-142	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	110.257149669554	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACTAAATAGGAGTTTTT	0	True	NA	NA	False	AAAACA	-16	NA	17276992	17332069	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_17277096_17282788_17282944_17295323_17295468_17296103_17296212_17301743_17301871_17309571_17309676_17310824_17311011_17311192_17311284_17311871_17311931_17312027_17312121_17315385_17315476_17330126_17330298_17330901_17330984_17331411
H1_mix_00015184	chr11	+	3250	3	FSM	ENSG00000070081.18	ENST00000532240.2	3262	3	0	12	0	-12	multi-exon	FALSE	canonical	0	0	junction_1	0.5	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCATAAATAATTCCTGAG	NA	False	NA	NA	False	AATAAA	-21	NA	17332041	17349968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_17334481_17337347_17337535_17349344
H1_mix_00015185	chr11	+	6181	5	FSM	ENSG00000188211.9	ENST00000338965.9	6364	5	113	70	14	-70	multi-exon	TRUE	canonical	2	2	junction_4	1.58113883008419	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAGACTAGCCTGGACAA	112	False	NA	NA	False	NA	NA	NA	17351912	17377271	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_17352040_17356650_17357002_17367008_17367348_17368866_17368965_17372005
H1_mix_00015188	chr11	+	1481	5	FSM	ENSG00000134333.14	ENST00000537296.5	1511	5	28	2	28	-2	multi-exon	FALSE	canonical	3	3737	junction_2	224.288876228849	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTCTATGTAGTGATAC	27	False	NA	NA	False	AATGAA	-41	NA	18398657	18405572	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_18399549_18400836_18401011_18402839_18403014_18403693_18403812_18405448
H1_mix_00015189	chr11	+	2169	5	FSM	ENSG00000134333.14	ENST00000375710.7	2169	5	0	0	0	0	multi-exon	FALSE	canonical	3	3737	junction_1	309.058550278099	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTACCGTGTGTTATATA	1095	False	NA	-93	True	NA	NA	NA	18399725	18407584	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_18401011_18402839_18403014_18403693_18403812_18405448_18405573_18407116
H1_mix_00015190	chr11	+	2622	4	FSM	ENSG00000134333.14	ENST00000538451.1	1345	4	-579	-698	-579	13	multi-exon	FALSE	canonical	3	4212	junction_1	159.652400197707	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATACTTGTAAAGGTTAA	1091	False	NA	NA	False	AATACA	-27	NA	18401955	18408438	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_18403014_18403693_18403812_18405448_18405573_18407116
H1_mix_00015191	chr11	+	667	1	FSM	ENSG00000279837.1	ENST00000623697.1	768	1	16	85	16	-85	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGTTAAGAGTTTAACT	1899	False	NA	NA	False	NA	NA	NA	18601897	18602564	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_18601900_18602600
H1_mix_00015192	chr11	+	2045	2	FSM	ENSG00000247595.5_ENSG00000279837.1	ENST00000542172.1	331	2	-1724	10	-619	0	multi-exon	FALSE	canonical	3	24	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTCATATTTTATGTTA	1264	False	NA	26	True	CATAAA	-15	NA	18601262	18603883	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_18603196_18603771
H1_mix_00015193	chr11	+	623	1	FSM	ENSG00000257043.1	ENST00000537438.1	499	1	21	-145	21	145	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCAGTGACACAGAGGTG	NA	False	NA	NA	False	NA	NA	NA	18665070	18665693	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_18665100_18665700
H1_mix_00015194	chr11	+	6325	15	FSM	ENSG00000177054.14	ENST00000525490.5	6304	15	-21	0	-10	0	multi-exon	TRUE	canonical	3	90	junction_1	78.4772487503771	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTTTCTGACACTTAAC	-20	True	NA	20	True	AATAAA	-23	NA	19117134	19176422	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_19117277_19146180_19146304_19147595_19147674_19149186_19149332_19150726_19150792_19152157_19152321_19152558_19152685_19155795_19155930_19158939_19159041_19163302_19163428_19164300_19164364_19165051_19165146_19166301_19170569_19172722_19172821_19175821
H1_mix_00015199	chr11	+	713	3	FSM	ENSG00000109854.14	ENST00000530266.5	713	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	160	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCCTTAATAAATGTTTG	NA	False	NA	-1	True	AGTAAA	-36	NA	20363684	20367625	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_20363750_20364236_20364433_20367173
H1_mix_00015201	chr11	+	774	2	FSM	ENSG00000109854.14	ENST00000532081.1	774	2	0	0	0	0	multi-exon	FALSE	canonical	3	405	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTGTCTCACTTGAGTG	-25	True	NA	29	True	AATAAA	-17	NA	20364140	20367655	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_20364433_20367173
H1_mix_00015202	chr11	+	2601	14	FSM	ENSG00000185238.13	ENST00000437750.2	1736	14	-165	-700	-7	70	multi-exon	FALSE	canonical	3	17	junction_1	117.956064431188	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTTAAGCCCAGGAGTTT	-21	True	NA	NA	False	NA	NA	NA	20387550	20509408	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_20387775_20389743_20389827_20392896_20393000_20395802_20395963_20397576_20397722_20402918_20402985_20407910_20408033_20426765_20426866_20452129_20452209_20461979_20462168_20464459_20464547_20493918_20493970_20494166_20494255_20508303
H1_mix_00015203	chr11	+	4159	8	FSM	ENSG00000185238.13	ENST00000529592.1	4159	8	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_2	25.5774135055258	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTAAAAATATTGATATT	NA	False	NA	24	True	AATAAA	-31	NA	20405445	20509282	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_20408033_20426765_20426866_20452129_20452209_20461979_20462168_20464459_20464547_20493918_20493970_20494166_20494255_20508303
H1_mix_00015204	chr11	+	6570	20	FSM	ENSG00000171714.13	ENST00000682266.1	6570	20	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	8.42664288132038	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTAAACTACATTTTGAC	30	False	NA	-4	True	AATAAA	-7	NA	22193154	22283344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_22193533_22211263_22211315_22221096_22221211_22225983_22226053_22227301_22227587_22236162_22236277_22239568_22239685_22250236_22250372_22250740_22250847_22250950_22251012_22255370_22255523_22257679_22257755_22259518_22259742_22262128_22262299_22262945_22263044_22270311_22270443_22272783_22272990_22274568_22274748_22276093_22276200_22279543
H1_mix_00015205	chr11	+	5433	12	FSM	ENSG00000187398.12	ENST00000533227.5	5016	12	-315	-102	-74	68	multi-exon	TRUE	canonical	1	4	junction_1	3.12811827892459	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGTATCAGGATGTAAG	9	True	NA	110	True	ATTAAA	-14	NA	24496895	25082706	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_24497306_24729172_24729287_24732117_24732189_24738220_24738303_24763245_24763309_24905990_24906054_24914475_24914539_24976590_24976666_24983125_24983294_25050037_25050131_25077328_25077407_25078553
H1_mix_00015206	chr11	+	395	1	FSM	ENSG00000176971.4	ENST00000318627.4	2976	1	251	2330	251	-2330	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCCTGCGGGAGGAGTT	16	False	NA	NA	False	NA	NA	NA	26994362	26994757	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_26994400_26994800
H1_mix_00015207	chr11	+	411	2	Antisense	novelGene_ENSG00000254934.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGGGCTCAGAGGCCT	NA	False	NA	NA	False	NA	NA	NA	27629084	27634902	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr11_+_27629404_27634810
H1_mix_00015208	chr11	+	411	2	Antisense	novelGene_ENSG00000254934.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGGGCTCAGAGGCCT	NA	False	NA	NA	False	NA	NA	NA	27629084	27634902	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr11_+_27629335_27634741
H1_mix_00015209	chr11	+	541	1	Genic_Genomic	ENSG00000245573.9	novel	NA	NA	NA	NA	20464	308	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACATATTCACTTTTGTTG	NA	False	NA	NA	False	TATAAA	-3	NA	27696189	27696730	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr11_+_27696200_27696700
H1_mix_00015210	chr11	+	2409	5	FSM	ENSG00000049449.10	ENST00000533898.5	2416	5	7	0	7	0	multi-exon	FALSE	canonical	3	780	junction_4	88.8594395660922	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTGTGTCCTGTGGTGTT	4594	False	NA	4	True	AATAAA	-20	NA	32096540	32105536	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_32097338_32098349_32098529_32100547_32100609_32103280_32103481_32104364
H1_mix_00015213	chr11	+	897	8	FSM	ENSG00000149100.13	ENST00000323213.9	889	8	-8	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	928.373759180371	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTATCAGAATAATAAAGA	-4	True	NA	NA	False	NA	NA	NA	32583830	32596010	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_32583930_32586933_32587145_32588593_32588733_32589011_32589136_32589546_32589642_32593865_32593950_32594913_32595014_32595965
H1_mix_00015217	chr11	+	297	3	FSM	ENSG00000060749.16	ENST00000527250.5	448	3	-14	165	0	0	multi-exon	FALSE	canonical	1	5	junction_2	32.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCACCTTCAGCAATAGAAA	151	False	NA	NA	False	NA	NA	NA	32893245	32931837	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_32893335_32927156_32927270_32931742
H1_mix_00015218	chr11	+	534	2	FSM	ENSG00000176148.16	ENST00000532687.5	739	2	29	176	29	0	multi-exon	FALSE	canonical	3	51	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCAAATTTGACTTTGG	20	False	NA	NA	False	AATAAA	-42	NA	33039445	33043936	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_33039793_33043749
H1_mix_00015219	chr11	+	1924	10	NIC	ENSG00000176148.16	novel	2633	10	NA	NA	-65	-237	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	20.127372185934	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATAACAAGATGGTCTTC	-6	True	NA	NA	False	ATTAAA	-17	NA	33039949	33072608	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_33040388_33043749_33043937_33054592_33054726_33057114_33057236_33057918_33058140_33058958_33059096_33061529_33061727_33065829_33066012_33068686_33068860_33072473
H1_mix_00015220	chr11	+	2660	2	Genic_Genomic	ENSG00000280798.1	novel	3306	1	NA	NA	-2419	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCAAGTGTGTATTTATA	663	False	NA	24	True	AATAAA	-15	NA	33073729	33079454	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr11_+_33073938_33077002
H1_mix_00015222	chr11	+	552	3	FSM	ENSG00000247151.7	ENST00000531870.5	568	3	16	0	-15	0	multi-exon	FALSE	canonical	1	1	junction_2	1	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCATACAGACACATGGC	45	False	NA	NA	False	NA	NA	NA	33161672	33190294	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_33161782_33188769_33188851_33189932
H1_mix_00015227	chr11	+	3436	27	FSM	ENSG00000135372.10	ENST00000531159.6	3436	27	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	57.4444934043744	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGCCCAGGAGGCTGCT	-2	True	NA	NA	False	NA	NA	NA	34105616	34146574	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_34105793_34112051_34112224_34113715_34113839_34115822_34115885_34118179_34118295_34118395_34118504_34122458_34122593_34123761_34123856_34124301_34124401_34127462_34127600_34130812_34130938_34131380_34131532_34132124_34132222_34133025_34133143_34134318_34134421_34134511_34134587_34135174_34135292_34136641_34136776_34136977_34137027_34139190_34139288_34139384_34139496_34140399_34140573_34141088_34141209_34141718_34141818_34142274_34142349_34143444_34143529_34146083
H1_mix_00015229	chr11	+	1913	2	Genic_Genomic	ENSG00000271369.1	novel	562	1	NA	NA	-17172	560	multi-exon	FALSE	canonical	3	27	junction_1	0	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGCCTTACATGTTT	NA	False	NA	15	True	AATAAA	-18	NA	34692427	34710721	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr11_+_34692890_34709270
H1_mix_00015230	chr11	+	1373	5	Intergenic	novelGene_238	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	17.6493625947228	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCTGAAAATGTCCCTAT	NA	False	NA	0	True	AATAAA	-12	NA	34692648	34877668	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_34692890_34715056_34715235_34732284_34732430_34754457_34754608_34877009
H1_mix_00015232	chr11	+	3731	6	FSM	ENSG00000110435.13	ENST00000430469.6	952	6	9	-2788	0	1935	multi-exon	FALSE	canonical	3	17	junction_3	183.822305501808	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAGTGTGGGAGAAAAGT	6	True	NA	NA	False	AATATA	-7	NA	34916640	34998063	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_34916816_34931403_34931485_34947505_34947607_34984569_34984729_34992314_34992380_34994913
H1_mix_00015234	chr11	+	1469	2	NNC	ENSG00000179431.7	novel	851	2	NA	NA	12	-452	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	22	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACATTGGCTGGTGGAG	14	False	NA	NA	False	NA	NA	NA	35618471	35620400	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_35619916_35620375
H1_mix_00015235	chr11	+	1829	5	FSM	ENSG00000179241.13	ENST00000528989.5	1879	5	50	0	-31	0	multi-exon	FALSE	canonical	3	22	junction_1	61.4186453774422	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTAACTTGAGTTGGCCCA	-38	True	NA	NA	False	NA	NA	NA	35944030	36230267	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_35944145_36081652_36081779_36098326_36098462_36227084_36227431_36229159
H1_mix_00015236	chr11	+	3553	5	NIC	ENSG00000179241.13	novel	3814	6	NA	NA	-31	54	combination_of_known_junctions	FALSE	canonical	1	8	junction_4	72.9948628329419	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGACAGTCACTTCTGTC	-38	True	NA	76	True	TATAAA	-2	NA	35944030	36232190	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_35944145_36036102_36036250_36081652_36081779_36098326_36098462_36229159
H1_mix_00015238	chr11	+	790	4	FSM	ENSG00000135362.14	ENST00000526682.5	805	4	15	0	-5	0	multi-exon	FALSE	canonical	2	7	junction_1	3.29983164553722	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGGGGGTGGCTTGCAA	-3	True	NA	NA	False	NA	NA	NA	36376395	36403323	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_36376705_36393845_36394012_36400996_36401286_36403297
H1_mix_00015241	chr11	+	1001	7	FSM	ENSG00000166352.18	ENST00000676979.1	1005	7	4	0	1	0	multi-exon	FALSE	canonical	2	3	junction_1	124.813193747029	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTTTGTGGAAATTTAC	-17	True	NA	17	True	AATAAA	-18	NA	36594502	36659272	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_36594642_36597643_36597731_36610080_36610240_36633283_36633439_36636050_36636118_36648015_36648156_36659018
H1_mix_00015242	chr11	+	3485	5	FSM	ENSG00000166352.18	ENST00000677116.1	3485	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	122.217787167008	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAATCCACCAATTTCT	-18	True	NA	NA	False	ATTAAA	-16	NA	36594501	36661909	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_36594642_36610080_36610240_36633283_36633439_36648015_36648156_36659018
H1_mix_00015244	chr11	+	1760	13	FSM	ENSG00000166181.13	ENST00000534600.5	1760	13	0	0	0	0	multi-exon	FALSE	canonical	3	1347	junction_9	160.173408633685	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCTTGTATTCAGAGGA	85	False	NA	NA	False	ATTAAA	-24	NA	43312095	43336230	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_43312197_43318639_43318802_43320820_43320915_43321410_43321477_43321984_43322137_43323429_43323637_43326506_43326612_43327788_43327879_43328711_43328894_43329964_43330059_43330507_43330565_43335277_43335355_43335857
H1_mix_00015250	chr11	+	2332	1	FSM	ENSG00000283341.3	ENST00000636894.1	2134	1	17	-215	-11	215	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAACAGAACAAATAGTTCA	20	False	NA	NA	False	NA	NA	NA	43644254	43646586	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_43644300_43646600
H1_mix_00015251	chr11	+	554	3	FSM	ENSG00000149084.13	ENST00000636722.1	540	3	-14	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	476	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAGCTAATTAATGTTTT	-12	True	NA	NA	False	NA	NA	NA	43680780	43754149	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_43681184_43750910_43750958_43754045
H1_mix_00015254	chr11	+	863	3	FSM	ENSG00000166199.13	ENST00000524742.5	842	3	-21	0	3	0	multi-exon	FALSE	canonical	3	16	junction_1	27	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTAAATTCATGGTTTTT	-11	True	NA	NA	False	NA	NA	NA	43880833	43883185	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_43881447_43882582_43882732_43883084
H1_mix_00015255	chr11	+	1118	8	NIC	ENSG00000166199.13	novel	1544	10	NA	NA	78	2	combination_of_known_junctions	FALSE	canonical	2	4	junction_6	20.4270728721089	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGATGATTTTGTTCTAA	60	False	NA	16	True	ATTAAA	-18	NA	43880951	43920268	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_43881180_43882582_43882732_43883084_43883189_43883982_43884018_43886605_43886654_43889724_43889829_43919037_43919137_43919917
H1_mix_00015258	chr11	+	2937	14	ISM	ENSG00000151348.16	ENST00000343631.4	3452	15	393	494	387	0	3prime_fragment	FALSE	canonical	3	15	junction_1	64.9392068916458	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACTGTGTCTTAAACACC	-4	True	NA	42	True	ATTAAA	-20	NA	44096215	44244931	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_44096322_44107682_44108249_44109193_44109284_44114184_44114302_44124788_44124985_44126815_44126956_44130044_44130139_44171610_44171743_44197828_44198019_44206792_44206960_44232352_44232497_44234114_44234244_44236292_44236376_44244148
H1_mix_00015260	chr11	+	652	4	FSM	ENSG00000019485.14	ENST00000528980.1	652	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	2.62466929133727	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCCCAACCCTCAATGAG	1851	False	NA	NA	False	NA	NA	NA	45182916	45226183	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_45183124_45204710_45204779_45219569_45219758_45225994
H1_mix_00015261	chr11	+	4299	1	ISM	ENSG00000019485.14	ENST00000683152.1	10729	8	84172	0	47894	0	mono-exon	FALSE	NA	NA	NA	NA	NA	497	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACCACTGTTGAATTGCT	NA	False	NA	8	True	AATAAA	-15	NA	45230810	45235109	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_45230800_45235100
H1_mix_00015262	chr11	+	3012	15	NNC	ENSG00000165905.18	novel	2552	14	NA	NA	-298	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	241.111414673205	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTTAAAACATCTTTTTT	725	False	NA	24	True	GGGGCT	-43	NA	45922357	45929082	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_45922729_45922820_45922965_45923057_45923168_45923472_45923556_45924153_45924278_45924505_45924678_45924784_45924890_45926038_45926152_45926221_45926348_45926441_45926598_45926710_45926872_45927314_45927594_45927748_45928070_45928176_45928373_45928531
H1_mix_00015263	chr11	+	2448	15	NIC	ENSG00000165905.18	novel	2552	14	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	183.696858204722	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTGTTCCTGGTTTG	-11	True	NA	38	True	ATTAAA	-14	NA	45922666	45929096	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_45922729_45922820_45922965_45923057_45923168_45923472_45923556_45924153_45924278_45924505_45924678_45924784_45924890_45926038_45926152_45926221_45926348_45926441_45926598_45926710_45926872_45927314_45927594_45927919_45928070_45928176_45928373_45928629
H1_mix_00015264	chr11	+	2617	14	NNC	ENSG00000165905.18	novel	2552	14	NA	NA	33	0	intron_retention	FALSE	canonical	0	0	junction_4	219.894030422348	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTGTTCCTGGTTTG	11	True	NA	38	True	ATTAAA	-14	NA	45922688	45929096	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_45922729_45922820_45923168_45923472_45923556_45924153_45924278_45924505_45924678_45924784_45924890_45926038_45926152_45926221_45926348_45926441_45926598_45926710_45926872_45927314_45927594_45927919_45928070_45928176_45928373_45928531
H1_mix_00015265	chr11	+	2294	10	FSM	ENSG00000165905.18	ENST00000528236.5	2294	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	250.385825733796	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTGTTCCTGGTTTG	1472	False	NA	38	True	ATTAAA	-14	NA	45924149	45929096	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_45924278_45924505_45924678_45924784_45924890_45926038_45926348_45926441_45926598_45926710_45926872_45927314_45927594_45927748_45928070_45928176_45928373_45928629
H1_mix_00015266	chr11	+	566	4	FSM	ENSG00000165905.18	ENST00000525609.5	566	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	274.537591030607	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTCTTTGTGTGCCCCAG	1776	False	NA	NA	False	NA	NA	NA	45924453	45926552	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_45924678_45924784_45924890_45926221_45926348_45926441
H1_mix_00015268	chr11	+	2384	10	NIC	ENSG00000157613.11	novel	2673	12	NA	NA	15	-10	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	41.0501048855068	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGATGCAGCAT	11	True	NA	NA	False	AAGAAA	-16	NA	46277676	46321399	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_46278214_46299934_46300164_46311031_46311190_46312324_46312475_46312611_46312671_46312850_46312920_46316285_46316386_46317360_46317488_46320263_46320529_46320709
H1_mix_00015269	chr11	+	528	5	FSM	ENSG00000157613.11	ENST00000530518.1	528	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	58.0231634780456	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTGCTGAACGCATTCT	1	True	NA	10	True	ATTAAA	-15	NA	46311156	46315387	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46311190_46312324_46312475_46312611_46312671_46312850_46312920_46315170
H1_mix_00015270	chr11	+	284	4	FSM	ENSG00000149091.15	ENST00000525242.5	542	4	258	0	258	0	multi-exon	FALSE	canonical	0	0	junction_1	249.609027614521	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCACACGCCCTGCATCG	59	False	NA	NA	False	AAGAAA	-22	NA	46338855	46368045	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46338891_46367290_46367400_46367651_46367748_46368001
H1_mix_00015271	chr11	+	3515	31	FSM	ENSG00000149091.15	ENST00000524984.5	3512	31	-3	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	148.938574213965	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTCTTCTTTTGCG	28	True	NA	31	True	AGTAAA	-19	NA	46345433	46380554	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46345586_46367290_46367400_46367651_46367748_46368004_46368080_46369363_46369551_46369940_46370010_46371312_46371385_46371486_46371604_46371703_46371776_46372074_46372171_46372427_46372511_46372616_46372678_46372770_46372885_46372960_46373102_46374156_46374236_46374398_46374455_46374603_46374667_46374765_46374840_46374933_46375046_46375431_46375632_46375850_46375952_46376065_46376146_46376327_46376398_46376523_46376565_46377072_46377213_46378197_46378230_46378456_46378501_46378990_46379112_46379202_46379237_46379468_46379569_46379830
H1_mix_00015274	chr11	+	3482	31	FSM	ENSG00000149091.15	ENST00000456247.6	3482	31	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_3	84.2747886381212	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTCTTCTTTTGCG	26	False	NA	31	True	AGTAAA	-19	NA	46347571	46380554	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46347821_46367290_46367400_46367651_46367748_46368004_46368080_46369493_46369551_46369940_46370010_46371312_46371385_46371486_46371604_46371703_46371776_46372074_46372171_46372427_46372511_46372616_46372678_46372770_46372885_46372960_46373102_46374156_46374236_46374398_46374455_46374603_46374667_46374765_46374840_46374933_46375046_46375431_46375632_46375850_46375952_46376065_46376146_46376327_46376398_46376523_46376565_46377072_46377213_46378197_46378230_46378456_46378501_46378990_46379112_46379202_46379237_46379468_46379569_46379830
H1_mix_00015275	chr11	+	4005	32	FSM	ENSG00000149091.15	ENST00000454345.5	4086	32	81	0	69	0	multi-exon	FALSE	canonical	1	1	junction_1	147.817609863101	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTCTTCTTTTGCG	74	False	NA	31	True	AGTAAA	-19	NA	46361675	46380554	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46361707_46366243_46366985_46367290_46367400_46367651_46367748_46368004_46368080_46369493_46369551_46369940_46370010_46371312_46371385_46371486_46371604_46371703_46371776_46372074_46372171_46372427_46372511_46372616_46372678_46372770_46372885_46372960_46373102_46374156_46374236_46374398_46374455_46374603_46374667_46374765_46374840_46374933_46375046_46375431_46375632_46375850_46375952_46376065_46376146_46376327_46376398_46376523_46376565_46377072_46377213_46378197_46378230_46378456_46378501_46378990_46379112_46379202_46379237_46379468_46379569_46379830
H1_mix_00015276	chr11	+	3675	3	FSM	ENSG00000149091.15	ENST00000527211.5	3679	3	4	0	4	0	multi-exon	FALSE	canonical	3	451	junction_2	25	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGCTTTTCTTCTTTT	NA	False	NA	28	True	AGTAAA	-16	NA	46376523	46380551	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46379112_46379202_46379569_46379830
H1_mix_00015277	chr11	+	1339	5	FSM	ENSG00000110492.17	ENST00000489525.5	1339	5	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_4	5093.53163335617	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTTCTTTTTTAATATAT	2	True	NA	-5	True	AATAAA	-24	NA	46381736	46383806	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46381886_46382056_46382134_46382293_46382462_46382586_46383194_46383468
H1_mix_00015280	chr11	+	2566	17	FSM	ENSG00000175224.17	ENST00000529655.5	2566	17	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	147.606688110668	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTTTGTCACTTGGAGT	-15	True	NA	18	True	AATAAA	-20	NA	46617540	46673041	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46617891_46618324_46618376_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
H1_mix_00015284	chr11	+	4085	17	NIC	ENSG00000175224.17	novel	4199	18	NA	NA	1	0	intron_retention	FALSE	canonical	3	36	junction_2	136.237370400893	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCTCCTGTCCTGTAGGT	8	True	NA	18	True	AATAAA	-18	NA	46617563	46674518	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_46617891_46618259_46618376_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
H1_mix_00015287	chr11	+	1528	8	FSM	ENSG00000149179.14	ENST00000525895.5	1527	8	-1	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	104.729388893277	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGTGAGTCTAAAGCTC	25	True	NA	22	True	AATAAA	-19	NA	46936777	47162245	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46936852_47052387_47052519_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47161126_47161191_47161463
H1_mix_00015289	chr11	+	2141	1	FSM	ENSG00000149179.14	ENST00000624693.1	2141	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGTGAGTCTAAAGCTC	5057	False	NA	22	True	AATAAA	-19	NA	47160104	47162245	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47160100_47162200
H1_mix_00015290	chr11	+	3042	8	NIC	ENSG00000134574.12	novel	1591	9	NA	NA	-33	159	intron_retention	FALSE	canonical	2	16	junction_4	92.1427464008194	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATGTTAATGCTCTGGA	-22	True	NA	NA	False	NA	NA	NA	47214431	47239008	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_47216473_47216857_47217050_47232813_47232960_47234572_47234673_47235269_47235413_47237836_47238002_47238137_47238184_47238799
H1_mix_00015291	chr11	+	852	6	FSM	ENSG00000134574.12	ENST00000614825.4	852	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	74.0362073582919	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACATGGACGGCAAAGAGG	116	False	NA	NA	False	NA	NA	NA	47214569	47234653	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47214675_47215072_47215264_47216335_47216473_47216857_47217050_47232813_47232960_47234572
H1_mix_00015292	chr11	+	3101	8	FSM	ENSG00000134574.12	ENST00000612309.4	3101	8	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_4	60.1969556488346	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGCGTGGATCTTCCA	14	True	NA	14	True	AATAAA	-15	NA	47215094	47239217	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47216473_47216857_47217050_47232813_47232960_47234572_47234673_47234756_47235413_47237836_47238002_47238137_47238184_47238799
H1_mix_00015293	chr11	+	2723	9	NIC	ENSG00000134574.12	novel	1815	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	160	junction_4	59.3359081838308	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCTGCGTGGATCTTCC	56	False	NA	13	True	AATAAA	-14	NA	47215136	47239216	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_47216473_47216857_47217050_47232813_47232960_47234572_47234673_47234756_47234935_47235269_47235413_47237836_47238002_47238137_47238184_47238799
H1_mix_00015295	chr11	+	1715	8	FSM	ENSG00000025434.19	ENST00000481020.5	1704	8	-11	0	-3	0	multi-exon	FALSE	canonical	3	32	junction_1	29.2372421156752	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGTCAAAGGGTTGCGAG	13	True	NA	12	True	ATTAAA	-2	NA	47248912	47268831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47249000_47259790_47259980_47260408_47260676_47261240_47261450_47261546_47262019_47267912_47268027_47268260_47268356_47268549
H1_mix_00015296	chr11	+	1330	9	FSM	ENSG00000025434.19	ENST00000407404.5	1330	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	40.2893829066666	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAAACATTCCTGGGAGCT	21	False	NA	-38	True	NA	NA	NA	47248955	47268781	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47249000_47259179_47259260_47259790_47259980_47260408_47260676_47261240_47261450_47261918_47262019_47267912_47268027_47268260_47268356_47268549
H1_mix_00015298	chr11	+	1029	7	NIC	ENSG00000025434.19	novel	1480	9	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_3	45.6350255347311	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGAGTTTTGTGGCTACTG	-8	True	NA	26	True	ATTAAA	-16	NA	47257974	47268845	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_47258130_47259179_47259260_47259790_47259980_47261918_47262019_47267912_47268027_47268260_47268356_47268549
H1_mix_00015299	chr11	+	5998	33	FSM	ENSG00000110514.19	ENST00000342922.8	6005	33	7	0	7	0	multi-exon	FALSE	canonical	2	3	junction_1	28.3972242261458	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGGCTCCCTGGCTGCCT	7	True	NA	15	True	AATAAA	-15	NA	47269382	47330031	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47269645_47273826_47273977_47274562_47275160_47275898_47276203_47276731_47276864_47278164_47278279_47278998_47279080_47281574_47281754_47282380_47282617_47282812_47282970_47284177_47284282_47284374_47284566_47284940_47285195_47285450_47285591_47286432_47286535_47289390_47289494_47289866_47290054_47290148_47290300_47290609_47290817_47293882_47293984_47295495_47295580_47295896_47296056_47308590_47308700_47309280_47309402_47309506_47309613_47311731_47311843_47315219_47315328_47323670_47323836_47324264_47324338_47324470_47324578_47326737_47326808_47328657_47328705_47329045
H1_mix_00015301	chr11	+	5001	33	FSM	ENSG00000110514.19	ENST00000395344.7	4988	33	-13	0	-1	0	multi-exon	FALSE	canonical	3	14	junction_1	28.6590272645462	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAACTGCCTTCCCCTCA	-9	True	NA	NA	False	NA	NA	NA	47269670	47329357	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47269751_47273826_47273977_47274562_47275160_47275898_47276203_47276731_47276864_47278164_47278279_47278998_47279080_47281574_47281754_47282380_47282617_47282812_47282970_47284177_47284282_47284374_47284566_47284940_47285066_47285450_47285591_47286432_47286535_47289390_47289494_47289866_47290054_47290148_47290300_47290609_47290817_47293882_47293984_47295495_47295568_47295896_47296056_47308590_47308700_47309280_47309402_47309506_47309613_47311731_47311843_47315219_47315328_47323670_47323836_47324264_47324338_47324470_47324578_47326737_47326808_47328657_47328705_47329045
H1_mix_00015302	chr11	+	5876	34	FSM	ENSG00000110514.19	ENST00000349238.7	5873	34	-3	0	-1	0	multi-exon	FALSE	canonical	2	8	junction_15	34.9632103642033	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGGCTCCCTGGCTGCCT	-9	True	NA	15	True	AATAAA	-15	NA	47269670	47330031	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47269751_47273826_47273977_47274562_47275160_47275898_47276203_47276731_47276864_47278164_47278279_47278998_47279080_47281574_47281754_47282380_47282617_47282812_47282970_47284177_47284282_47284374_47284566_47284940_47285195_47285450_47285591_47286432_47286535_47288967_47289028_47289390_47289494_47289866_47290054_47290148_47290300_47290609_47290817_47293882_47293984_47295495_47295580_47295896_47296056_47308590_47308700_47309280_47309402_47309506_47309613_47311731_47311843_47315219_47315328_47323670_47323836_47324264_47324338_47324470_47324578_47326737_47326808_47328657_47328705_47329045
H1_mix_00015305	chr11	+	7591	32	NIC	ENSG00000110514.19	novel	5823	33	NA	NA	-36	0	intron_retention	FALSE	canonical	3	38	junction_13	23.5931523249546	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCAGGCTCCCTGGCTGCC	-24	True	NA	14	True	AATAAA	-14	NA	47270111	47330030	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_47270247_47273826_47273977_47274562_47275160_47275898_47276203_47276731_47276864_47278164_47278279_47278998_47279080_47281574_47281754_47282380_47282617_47282812_47282970_47284177_47284282_47284374_47284566_47284940_47285066_47285450_47285591_47286432_47286535_47289390_47289494_47289866_47290054_47290148_47290300_47290609_47290817_47293882_47293984_47295495_47295580_47295896_47296056_47308590_47308700_47309280_47309402_47309506_47309613_47311731_47311843_47315219_47315328_47323670_47323836_47324264_47324338_47324470_47324578_47326737_47328705_47329045
H1_mix_00015307	chr11	+	806	5	FSM	ENSG00000165915.14	ENST00000531419.5	785	5	-21	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	80.3321230890856	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCCAGCGCCCTCATCTA	-26	True	NA	NA	False	NA	NA	NA	47408583	47413778	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47408663_47410086_47410396_47411925_47412040_47412345_47412468_47413596
H1_mix_00015309	chr11	+	3551	5	FSM	ENSG00000165915.14	ENST00000524928.1	3553	5	2	0	2	0	multi-exon	FALSE	canonical	3	157	junction_4	28.1646942110153	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGCCTTGGTTCTG	1477	False	NA	24	True	AATAAA	-12	NA	47410086	47416494	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47410396_47411925_47412040_47412345_47412468_47413399_47413508_47413596
H1_mix_00015313	chr11	+	583	3	FSM	ENSG00000213619.11	ENST00000534208.5	583	3	0	0	0	0	multi-exon	FALSE	canonical	3	1042	junction_2	30	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACGTCCCAACTCGGCAAAA	3	True	NA	NA	False	NA	NA	NA	47579071	47580954	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47579159_47579268_47579335_47580524
H1_mix_00015314	chr11	+	730	5	FSM	ENSG00000213619.11	ENST00000524568.1	733	5	0	3	0	-3	multi-exon	FALSE	canonical	3	1042	junction_1	48.7615370963632	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGAGCCTTGGAACTGGG	30	False	NA	NA	False	NA	NA	NA	47579098	47582468	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_47579335_47580524_47580623_47580834_47580985_47582087_47582214_47582348
H1_mix_00015316	chr11	+	1989	6	FSM	ENSG00000149131.17	ENST00000531133.5	1004	6	-735	-250	-27	0	multi-exon	FALSE	canonical	3	36	junction_1	239.458221825854	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTGACAGACCATGACTT	NA	False	NA	0	True	TATAAA	-4	NA	57597535	57614831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57598322_57602034_57602170_57606009_57606214_57606407_57606548_57611716_57611937_57614327
H1_mix_00015317	chr11	+	917	4	FSM	ENSG00000149131.17	ENST00000531797.5	907	4	-10	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	315.421411236883	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTTTCTCTAGTTCAAG	-7	True	NA	-41	True	NA	NA	NA	57598222	57614790	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57598322_57602034_57602170_57611716_57611937_57614327
H1_mix_00015318	chr11	+	2175	1	FSM	ENSG00000208009.1	ENST00000385274.1	89	1	-2161	75	-2161	-75	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTTTCACATTGTGCTA	670	False	NA	134	True	NA	NA	NA	57639036	57641211	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57639000_57641200
H1_mix_00015322	chr11	+	5179	19	FSM	ENSG00000288534.1	ENST00000673781.1	5179	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	325.850364241845	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTCTCTCTTTTGTTT	-16	True	NA	-90	True	AATAGA	-31	NA	57712581	57818257	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57712808_57737607_57737669_57789036_57789156_57791384_57791674_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
H1_mix_00015323	chr11	+	562	4	FSM	ENSG00000213593.10	ENST00000533602.5	560	4	-2	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	349.877121286888	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACCATTGATGTGAGTG	14	True	NA	NA	False	NA	NA	NA	57712611	57738417	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57712808_57737607_57737669_57737785_57738027_57738353
H1_mix_00015324	chr11	+	703	6	FSM	ENSG00000213593.10	ENST00000525035.5	703	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	386.05108470253	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACAGATTGACAAGAAAGG	14	True	NA	NA	False	NA	NA	NA	57712611	57739212	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57712808_57737607_57737669_57737835_57738027_57738663_57738771_57738973_57739040_57739130
H1_mix_00015326	chr11	+	1476	2	FSM	ENSG00000211450.11	ENST00000533321.1	1454	2	-22	0	0	0	multi-exon	FALSE	canonical	3	2987	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAATCTTAAGGGATGGAC	16	True	NA	13	True	AATAAA	-35	NA	57741490	57743057	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57741718_57741808
H1_mix_00015327	chr11	+	2355	11	FSM	ENSG00000254732.2	ENST00000534647.2	2355	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	856.494693503702	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGCAAGGTAAGTGCTGT	207	False	NA	NA	False	NA	NA	NA	57741778	57804771	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57741955_57742116_57742248_57742862_57742985_57789036_57789156_57791384_57791674_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662
H1_mix_00015329	chr11	+	5800	17	FSM	ENSG00000198561.16	ENST00000426142.6	5800	17	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	230.520064202663	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	-30	True	NA	12	True	ATTAAA	-18	NA	57761796	57819178	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57762120_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
H1_mix_00015330	chr11	+	6016	18	FSM	ENSG00000198561.16	ENST00000428599.6	6016	18	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	244.791500858861	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	-30	True	NA	12	True	ATTAAA	-18	NA	57761796	57819178	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57762047_57791384_57791674_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
H1_mix_00015331	chr11	+	6226	20	FSM	ENSG00000198561.16	ENST00000361796.9	6226	20	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	361.712141253503	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	-30	True	NA	12	True	ATTAAA	-18	NA	57761796	57819178	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57762120_57789036_57789156_57791384_57791674_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806460_57806479_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
H1_mix_00015332	chr11	+	5267	18	NIC	ENSG00000198561.16	novel	6135	19	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	75	junction_16	335.127801888497	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGGGGGGTCTGTGTCA	39	True	NA	15	True	AATAAA	-15	NA	57761865	57818445	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_57762047_57789036_57789156_57791384_57791674_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57815393_57815501_57816299
H1_mix_00015336	chr11	+	573	5	FSM	ENSG00000166840.14	ENST00000525608.5	573	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	5.76085931090146	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCATACACAAACGTATATC	-6	True	NA	NA	False	AATACA	-22	NA	58927628	58954789	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_58927830_58943542_58943667_58947045_58947166_58947857_58947966_58954769
H1_mix_00015339	chr11	+	3344	2	FSM	ENSG00000189057.11	ENST00000411426.1	3344	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATTTAGAGTATTGGAG	5	True	NA	13	True	AATAAA	-23	NA	59107184	59127410	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_59107297_59124178
H1_mix_00015343	chr11	+	3592	4	FSM	ENSG00000166801.17	ENST00000361723.7	3592	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	37.1872140511882	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGTATTTGTCAGCCTC	-46	True	NA	18	True	ATTAAA	-15	NA	59144778	59155036	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_59144897_59145826_59145857_59148796_59148954_59151749
H1_mix_00015345	chr11	+	5955	7	FSM	ENSG00000166900.17	ENST00000528805.1	615	7	0	-5340	0	-2	multi-exon	FALSE	canonical	3	69	junction_6	234.876563326357	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTTCTGGCTCTGTCTCGA	NA	False	NA	23	True	AATAAA	-25	NA	59787066	59802706	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_59787137_59788872_59788948_59790518_59790587_59792106_59792216_59793098_59793173_59793379_59793515_59797282
H1_mix_00015346	chr11	+	2567	3	FSM	ENSG00000110104.13	ENST00000649393.1	2567	3	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_1	44	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCACCACGTGTCCAATGG	3824	False	NA	18	True	AATAAA	-9	NA	60846432	60851076	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_60848054_60849939_60850015_60850205
H1_mix_00015347	chr11	+	1953	3	FSM	ENSG00000110108.10	ENST00000536171.1	1959	3	6	0	6	0	multi-exon	FALSE	canonical	3	310	junction_1	8.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTGGTTTTAAATAAAGT	5497	False	NA	-22	True	NA	NA	NA	60919683	60923376	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_60919931_60920885_60920989_60921773
H1_mix_00015348	chr11	+	337	2	FSM	ENSG00000006118.15	ENST00000537065.1	324	2	-13	0	-10	0	multi-exon	FALSE	canonical	3	13	junction_1	0	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCACCTTCCGCGCCCGC	166	False	NA	NA	False	NA	NA	NA	60924449	60926631	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_60924734_60926578
H1_mix_00015350	chr11	+	3324	10	NIC	ENSG00000006118.15	novel	3498	11	NA	NA	-2	0	intron_retention	FALSE	canonical	1	5	junction_6	95.3321678250433	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGACTGCTGCCGTCTG	16	True	NA	23	True	AATAAA	-18	NA	60924489	60937159	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_60924734_60927203_60927419_60927640_60927860_60928628_60928961_60930509_60930660_60931688_60931885_60933541_60933745_60934487_60934765_60935251_60935444_60935863
H1_mix_00015351	chr11	+	649	4	FSM	ENSG00000256713.8	ENST00000451616.6	971	4	297	25	297	1	multi-exon	FALSE	canonical	2	5	junction_3	1.24721912892465	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAATAAAAACATAACCCAC	7242	False	NA	NA	False	NA	NA	NA	61248418	61251419	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_61248536_61249668_61249814_61249915_61250015_61251131
H1_mix_00015352	chr11	+	1918	15	NIC	ENSG00000149476.16	novel	4678	18	NA	NA	62	-15	combination_of_known_splicesites	FALSE	canonical	3	11	junction_8	43.779421593964	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCGTGAAAAAGAAAGTTAA	3434	False	NA	NA	False	NA	NA	NA	61338002	61346875	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_61338131_61339065_61339177_61339253_61339436_61341435_61341515_61341822_61341913_61342460_61342496_61342573_61342659_61342754_61342845_61343855_61343976_61344135_61344274_61345259_61345367_61345461_61345566_61345711_61345746_61345856_61345947_61346350
H1_mix_00015355	chr11	+	3891	3	FSM	ENSG00000149483.13	ENST00000540194.6	1885	3	163	-2169	-28	0	multi-exon	FALSE	canonical	2	6	junction_2	83.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGGAGTCTGTCTGTCTA	77	False	NA	14	True	AATAAA	-21	NA	61362315	61369211	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_61362421_61364251_61364871_61366044
H1_mix_00015359	chr11	+	1204	5	NNC	ENSG00000149483.13	novel	1073	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	18	junction_4	72.7164871263732	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGGAGTCTGTCTGTCTA	105	False	NA	14	True	AATAAA	-21	NA	61362343	61369211	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_61362421_61364251_61364519_61366044_61366217_61367922_61367999_61368599
H1_mix_00015362	chr11	+	463	4	FSM	ENSG00000256591.5	ENST00000536670.5	449	4	-16	2	-16	-2	multi-exon	FALSE	canonical	3	34	junction_3	224.049597683687	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAATGAGACCATTCTA	-20	True	NA	NA	False	AAGAAA	-30	NA	61430104	61468714	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_61430183_61437624_61437849_61438003_61438114_61468663
H1_mix_00015364	chr11	+	533	6	FSM	ENSG00000162148.11	ENST00000535545.5	533	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	5.95315042645489	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAGCAGAGAAGTGTGAC	1538	False	NA	-2	True	AATAAA	-6	NA	61486355	61490918	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_61486404_61486523_61486611_61486947_61487062_61487145_61487241_61490500_61490585_61490813
H1_mix_00015365	chr11	+	2259	1	FSM	ENSG00000204950.4	ENST00000378075.4	2270	1	10	1	10	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	1121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCATTTCCCATGTGCC	10	False	NA	13	True	AAGAAA	-44	NA	61508758	61511017	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_61508800_61511000
H1_mix_00015366	chr11	+	561	1	FSM	ENSG00000243742.5	ENST00000490750.1	961	1	503	-103	503	103	mono-exon	FALSE	NA	NA	NA	NA	NA	285	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAACAAAGAAAGAAAGAAA	NA	False	NA	NA	False	AAAAAG	-24	NA	61637182	61637743	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_61637200_61637700
H1_mix_00015367	chr11	+	6061	21	NNC	ENSG00000134780.10	novel	5799	20	NA	NA	38335	0	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_7	7.11530041530222	4767	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGGCTGCCTCGAATGTC	46	False	NA	33	True	TATAAA	-16	NA	61718801	61747001	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_61719006_61720111_61720251_61720678_61720891_61722858_61722961_61723433_61723573_61725994_61726083_61726675_61726848_61728152_61728288_61728930_61729009_61731316_61731442_61734848_61735003_61735560_61735645_61735738_61735817_61736269_61736351_61737181_61737325_61737686_61737756_61738134_61738208_61739464_61739662_61740462_61740593_61741161_61741350_61743531
H1_mix_00015369	chr11	+	5073	7	FSM	ENSG00000134824.14	ENST00000523235.5	5073	7	0	0	0	0	multi-exon	FALSE	canonical	3	2541	junction_5	118.83567085125	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCACTTCCTGTGTTTC	6007	False	NA	13	True	AATAAA	-13	NA	61854186	61867347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_61857072_61857453_61857531_61862971_61863070_61863281_61863379_61863706_61863787_61865151_61865278_61865637
H1_mix_00015370	chr11	+	6434	18	FSM	ENSG00000149503.13_ENSG00000289194.1	ENST00000278849.4	3698	18	26	-2762	13	731	multi-exon	TRUE	canonical	0	0	junction_5	2.40242092431319	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCCCAGGCTGGAGTGC	-4	True	NA	54	True	NA	NA	NA	62124023	62155514	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62124164_62128150_62128302_62128769_62128884_62129781_62130591_62137831_62137884_62138712_62138771_62138887_62139006_62140233_62140286_62140703_62140822_62140912_62141045_62144981_62145092_62145168_62145290_62145628_62145752_62146657_62146903_62148475_62148555_62148738_62148847_62150056_62150208_62151761
H1_mix_00015371	chr11	+	767	4	ISM	ENSG00000162174.12	ENST00000415229.6	2270	7	0	36207	0	4	5prime_fragment	FALSE	canonical	3	75	junction_1	136.948489910948	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGTTATCTACAGTTCT	-17	True	NA	19	True	ATTAAA	-20	NA	62337447	62357205	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_62337575_62337889_62338168_62356324_62356468_62356986
H1_mix_00015372	chr11	+	4847	4	FSM	ENSG00000162174.12	ENST00000529226.3	574	4	-22	-4251	0	4	multi-exon	FALSE	canonical	3	30	junction_2	61.4979674460872	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGGTTGGGAGTCACTG	-17	True	NA	NA	False	AATAAA	-21	NA	62337447	62393416	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62337575_62337889_62338168_62356986_62357145_62389132
H1_mix_00015373	chr11	+	1398	7	NIC	ENSG00000162174.12	novel	2270	7	NA	NA	0	59	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	121.894307587443	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAGCCTGCAGACACTGT	-17	True	NA	NA	False	AAAAAG	-45	NA	62337447	62392644	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_62337575_62337993_62338168_62356324_62356468_62356986_62357145_62389132_62389252_62391521_62391633_62392078
H1_mix_00015378	chr11	+	2034	3	FSM	ENSG00000214756.8	ENST00000532971.2	2034	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	116.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGCAGCCTCAATTTTCT	-2	True	NA	19	True	TATAAA	-33	NA	62665311	62668108	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62665333_62665646_62665947_62666395
H1_mix_00015379	chr11	+	1801	5	NNC	ENSG00000162222.14	novel	606	3	NA	NA	14	2	at_least_one_novel_splicesite	FALSE	non_canonical	1	5	junction_4	72.342933310725	543	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGCATTTAAGTATTTAT	-8	True	NA	NA	False	ATTAAA	-21	NA	62728125	62740286	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_62728228_62728822_62729087_62735381_62735565_62738287_62739141_62739887
H1_mix_00015380	chr11	+	1086	8	NIC	ENSG00000168002.12	novel	919	8	NA	NA	-10	0	intron_retention	FALSE	canonical	3	74	junction_2	429.358230148111	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGAAGTGTTATCTTCT	-1	True	NA	17	True	TATAAA	-14	NA	62761606	62766707	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_62761661_62761794_62761905_62762541_62763027_62765181_62765233_62765339_62765406_62765652_62765725_62766242_62766277_62766493
H1_mix_00015381	chr11	+	1556	7	FSM	ENSG00000168002.12	ENST00000531944.5	1556	7	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_2	433.803623006232	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGTGTTATCTTCTTTT	9	False	NA	20	True	TATAAA	-17	NA	62761616	62766710	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62761661_62761794_62762867_62765181_62765233_62765339_62765406_62765652_62765725_62766242_62766277_62766493
H1_mix_00015382	chr11	+	1241	8	FSM	ENSG00000162227.8	ENST00000524976.5	1061	8	-312	132	-267	0	multi-exon	FALSE	canonical	3	161	junction_5	22.5515282979098	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGCCACTGGGCCTAAACC	9482	False	NA	NA	False	GGGGCT	-27	NA	62771089	62782333	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62771491_62775770_62775931_62776383_62776471_62777977_62778129_62778284_62778336_62778868_62778964_62781893_62781969_62782112
H1_mix_00015383	chr11	+	772	5	NNC	ENSG00000185475.11	novel	1043	5	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	162.244414387676	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTGAGTTTTTGATGTTA	6	True	NA	25	True	NA	NA	NA	62787415	62790246	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_62787528_62789125_62789211_62789291_62789427_62789600_62789680_62789885
H1_mix_00015384	chr11	+	789	5	NNC	ENSG00000185475.11	novel	1043	5	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	167.8635979002	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTGAGTTTTTGATGTTA	13	True	NA	25	True	NA	NA	NA	62787422	62790246	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_62787528_62789101_62789211_62789291_62789427_62789600_62789680_62789885
H1_mix_00015385	chr11	+	2843	7	FSM	ENSG00000168003.18	ENST00000681563.1	2843	7	0	0	0	0	multi-exon	FALSE	canonical	3	2460	junction_1	271.806303581552	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTCTCTCATAGCAGGAA	-2	True	NA	41	True	AATAAA	-31	NA	62880895	62888870	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62881448_62881892_62883000_62884456_62884526_62884631_62884691_62885176_62885609_62888134_62888219_62888330
H1_mix_00015386	chr11	+	1926	9	FSM	ENSG00000168003.18	ENST00000541649.2	1926	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	1218.02349500123	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAGGAATTTCTCTCCT	-25	True	NA	51	True	AATAAA	-41	NA	62881697	62888880	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62881719_62881892_62882619_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
H1_mix_00015389	chr11	+	2174	6	FSM	ENSG00000168003.18	ENST00000542922.5	2174	6	0	0	0	0	multi-exon	FALSE	canonical	3	2558	junction_1	274.577930649934	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTTCCCTCTGCTTCTC	423	False	NA	29	True	AATAAA	-19	NA	62883347	62888858	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
H1_mix_00015393	chr11	+	2540	5	ISM	ENSG00000072518.22	ENST00000677688.1	4717	19	15735	6	1221	-6	3prime_fragment	FALSE	canonical	0	0	junction_1	69.4784139139632	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGAGCTGCCTCCTCCT	9067	False	NA	4	True	AATAAA	-13	NA	63904281	63911013	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_63904355_63904785_63905044_63906087_63906115_63908259_63908305_63908876
H1_mix_00015394	chr11	+	567	5	FSM	ENSG00000110583.13	ENST00000536939.1	567	5	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_2	20.104414938018	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTCCAGCCAGGTGACAA	0	True	NA	NA	False	NA	NA	NA	63938993	63952619	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_63939103_63945839_63945936_63946950_63947004_63952237_63952334_63952406
H1_mix_00015400	chr11	+	876	5	FSM	ENSG00000149761.9	ENST00000428347.2	876	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	165.227872951267	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTACAGGAATCTTCTTT	293	False	NA	NA	False	NA	NA	NA	64226608	64229539	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_64227133_64227400_64227494_64227567_64227667_64229246_64229345_64229477
H1_mix_00015401	chr11	+	1419	5	FSM	ENSG00000110011.14_ENSG00000149761.9	ENST00000321460.5	1015	5	-404	0	76	0	multi-exon	FALSE	canonical	3	22	junction_3	71.6955368206418	289	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCGTGTCCGGCTCCCTCC	29	False	NA	19	True	AATAAA	-13	NA	64230353	64234281	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_64230941_64231870_64231965_64232429_64232615_64232700_64232866_64233893
H1_mix_00015402	chr11	+	618	4	FSM	ENSG00000286264.2	ENST00000650773.1	618	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	469.259227103977	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAGGCCCCTCCTGAGG	295	False	NA	NA	False	NA	NA	NA	64241378	64243497	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_64241662_64242383_64242559_64243198_64243312_64243450
H1_mix_00015403	chr11	+	1731	8	NIC	ENSG00000173264.15	novel	2166	7	NA	NA	370	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	65.4257641319144	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTGTGCACCTGTCTGT	171	False	NA	12	True	AATAAA	-16	NA	64270431	64289491	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_64270662_64286509_64286882_64286964_64287015_64287720_64287947_64288064_64288215_64288339_64288469_64288602_64288722_64289036
H1_mix_00015405	chr11	+	1813	8	NIC	ENSG00000173264.15	novel	1485	7	NA	NA	34	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_1	72.7615619538172	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTGTGCACCTGTCTGT	-4	True	NA	12	True	AATAAA	-16	NA	64284844	64289491	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_64285263_64286509_64286882_64286964_64287015_64287720_64287947_64288064_64288215_64288339_64288469_64288602_64288722_64289142
H1_mix_00015410	chr11	+	274	2	FSM	ENSG00000219435.6	ENST00000535981.1	392	2	118	0	118	0	multi-exon	FALSE	canonical	2	6	junction_1	0	818	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAGAGTCGATGCATG	272	False	NA	-6	True	NA	NA	NA	64303772	64304749	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_64303840_64304542
H1_mix_00015411	chr11	+	4563	20	FSM	ENSG00000168071.22	ENST00000494080.5	4563	20	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	17.0026883974971	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCCTGAGTCTTGCTCT	671	False	NA	11	True	AATAAA	-11	NA	64341605	64357524	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_64341743_64341993_64342140_64342293_64342376_64342501_64342681_64343178_64343326_64343506_64343616_64343777_64343915_64343996_64345158_64349330_64349459_64349550_64349669_64351159_64351617_64352129_64352387_64352743_64352888_64353053_64353241_64353350_64353497_64353714_64353814_64354003_64354171_64355193_64355401_64355559_64355629_64357038
H1_mix_00015412	chr11	+	3153	17	FSM	ENSG00000162302.13	ENST00000528057.5	3121	17	-32	0	-32	0	multi-exon	FALSE	canonical	3	8	junction_10	12.608900626145	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGTGTCCTCGTTCGTG	3802	False	NA	17	True	AATAAA	-26	NA	64359115	64372215	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_64359291_64359377_64359450_64360162_64360382_64360476_64360593_64361133_64361242_64361468_64361550_64361641_64361746_64361851_64362003_64365300_64365466_64368131_64368261_64368488_64368602_64368703_64368798_64369445_64369620_64369698_64369894_64370224_64370385_64370562_64370727_64371282
H1_mix_00015414	chr11	+	790	1	FSM	ENSG00000269038.1	ENST00000594089.1	452	1	-135	-203	-135	203	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCACTCCTGCAATCCCA	NA	False	NA	NA	False	AATACA	-20	NA	64778818	64779608	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_64778800_64779600
H1_mix_00015415	chr11	+	601	1	FSM	ENSG00000213465.8	ENST00000529254.1	601	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTGCTACCGAGGCTGT	4852	False	NA	-50	True	NA	NA	NA	65021515	65022116	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65021500_65022100
H1_mix_00015416	chr11	+	573	5	FSM	ENSG00000110025.13	ENST00000529673.5	573	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	114.121371793367	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCCCGCCCCCTGATGAC	14	True	NA	NA	False	NA	NA	NA	65027471	65035125	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65027637_65032167_65032272_65032430_65032552_65034846_65034963_65035058
H1_mix_00015420	chr11	+	1682	9	FSM	ENSG00000149809.17	ENST00000529601.5	1671	9	-11	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	167.044904142569	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAACAAGCAACAGGGCTG	-6	True	NA	NA	False	NA	NA	NA	65111866	65116384	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65112068_65112514_65112712_65113219_65113415_65113490_65113595_65114712_65114833_65114912_65115082_65115313_65115395_65115475_65115599_65115892
H1_mix_00015422	chr11	+	1275	1	FSM	ENSG00000278952.1	ENST00000623192.1	802	1	-327	-146	-327	146	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCCAGGAGTTGGCGGC	6110	False	NA	NA	False	NA	NA	NA	65117982	65119257	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65118000_65119300
H1_mix_00015423	chr11	+	2065	4	FSM	ENSG00000149792.9	ENST00000524482.5	2065	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	334.799774326222	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCTGAAACTGTCTCCAA	1425	False	NA	19	True	ATTAAA	-29	NA	65122182	65127356	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65122341_65124501_65124653_65125487_65125613_65125725
H1_mix_00015424	chr11	+	836	3	FSM	ENSG00000149792.9	ENST00000534078.1	518	3	-20	-298	0	0	multi-exon	FALSE	canonical	3	23	junction_1	364.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTATTTTTAGTAGAGA	46	False	NA	NA	False	NA	NA	NA	65122290	65126302	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65122425_65125487_65125613_65125725
H1_mix_00015426	chr11	+	2948	22	NIC	ENSG00000014216.16	novel	3086	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	188.227801388157	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCACATCTGTCTGTGAT	12	True	NA	7	True	AATAAA	-3	NA	65182461	65211987	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_65182563_65182700_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214_65187299_65187954_65188041_65188413_65188489_65188585_65188747_65204682_65204859_65205709_65205722_65206462_65206675_65206779_65206820_65208054_65208121_65208204_65208263_65209322_65209388_65209848_65209918_65210017_65210097_65210335_65210453_65210813_65210873_65211259
H1_mix_00015427	chr11	+	2828	4	FSM	ENSG00000014216.16	ENST00000528165.5	2828	4	0	0	0	0	multi-exon	FALSE	canonical	3	807	junction_2	33.5095342982992	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTTTCTCCCCAGCCTA	278	False	NA	25	True	AATAAA	-21	NA	65208477	65212005	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65209918_65210017_65210097_65210335_65210453_65210813
H1_mix_00015429	chr11	+	1656	9	NIC	ENSG00000197847.12	novel	1939	10	NA	NA	5	-109	combination_of_known_junctions	FALSE	canonical	2	7	junction_8	6.46988214730377	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTGGAGGGAAACCCCAC	14	False	NA	NA	False	AAAACA	-38	NA	65213880	65242246	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_65214254_65214325_65214430_65217534_65217689_65222472_65222597_65223464_65223581_65233149_65233365_65236408_65236518_65236684_65236889_65241989
H1_mix_00015430	chr11	+	692	5	FSM	ENSG00000014138.9	ENST00000533192.1	692	5	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_2	13.9373598647664	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCAGACCCTCTAGCCAT	7627	False	NA	NA	False	GGGGCT	-42	NA	65287601	65294776	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65287841_65289049_65289089_65289798_65289873_65294152_65294262_65294545
H1_mix_00015433	chr11	+	3559	10	FSM	ENSG00000126391.14	ENST00000355991.9	3514	10	-41	-4	-25	1	multi-exon	FALSE	canonical	3	8	junction_2	31.0876895964374	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGGGCAGCTCATGATAT	3661	False	NA	NA	False	ATTAAA	-18	NA	65386595	65413526	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65386762_65387036_65387122_65393572_65393675_65394040_65394100_65394258_65394426_65396798_65397021_65399735_65399860_65400723_65400868_65404863_65405069_65411241
H1_mix_00015436	chr11	+	2584	17	FSM	ENSG00000142186.18	ENST00000525364.5	2584	17	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_16	122.957817970229	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTGCCGGGCTCAGT	-25	True	NA	28	True	AATAAA	-13	NA	65525076	65538704	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65525265_65525573_65525715_65525920_65526044_65526123_65526351_65526782_65526874_65526961_65527118_65530628_65530788_65531575_65531684_65532691_65532806_65535226_65535383_65535952_65536142_65536258_65536335_65536585_65536751_65536985_65537129_65537811_65537881_65537966_65538183_65538441
H1_mix_00015437	chr11	+	1961	14	NNC	ENSG00000142186.18	novel	2584	17	NA	NA	1	-57	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	101.177680725163	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAGCAGAGGACAGCAGC	-16	True	NA	NA	False	NA	NA	NA	65525085	65537066	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_65525265_65525573_65525715_65525924_65526044_65526123_65526351_65526782_65526874_65526961_65527118_65530628_65530788_65531575_65531684_65532691_65532806_65535226_65535383_65535952_65536142_65536258_65536335_65536585_65536751_65536985
H1_mix_00015442	chr11	+	715	4	FSM	ENSG00000173465.8	ENST00000526877.1	713	4	-2	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	394.719591046043	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTCTCCACTCTGCTCT	14	True	NA	111	True	NA	NA	NA	65570484	65571858	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65570511_65570603_65570740_65570885_65570971_65571390
H1_mix_00015444	chr11	+	3235	17	FSM	ENSG00000213445.10	ENST00000527525.5	3235	17	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	92.888373868854	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAGAGGACTTCAGGGA	-6	True	NA	-7	True	NA	NA	NA	65639865	65650880	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65640022_65640830_65641601_65642249_65642378_65642462_65642640_65644954_65645130_65645853_65645958_65646220_65646379_65646455_65646664_65646969_65647066_65647383_65647659_65649261_65649481_65649560_65649673_65649756_65649866_65649949_65650052_65650137_65650193_65650400_65650480_65650568
H1_mix_00015445	chr11	+	712	4	FSM	ENSG00000285533.3	ENST00000654110.1	1697	4	-12	997	-7	-54	multi-exon	FALSE	canonical	2	3	junction_2	10.9645894689324	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTACACCGTCCTCTCAG	1037	False	NA	NA	False	NA	NA	NA	65662993	65666307	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65663149_65663426_65663684_65665420_65665544_65666130
H1_mix_00015449	chr11	+	923	6	FSM	ENSG00000172732.12	ENST00000525768.5	923	6	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	13.7317151150175	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGGCCCAGAAGTTGGC	15	True	NA	NA	False	NA	NA	NA	65860544	65863089	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65861103_65861349_65861436_65861946_65862046_65862210_65862280_65862443_65862530_65863064
H1_mix_00015453	chr11	+	533	3	FSM	ENSG00000175513.9	ENST00000528291.2	563	3	30	0	30	0	multi-exon	FALSE	canonical	3	6	junction_1	2	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGGTGTCTCCATCCCTAC	NA	False	NA	NA	False	NA	NA	NA	65945720	65947359	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65945867_65946879_65947017_65947109
H1_mix_00015454	chr11	+	4687	23	Fusion	ENSG00000175513.9_ENSG00000175467.15	novel	3557	20	NA	NA	8011	0	multi-exon	FALSE	canonical	3	16	junction_3	127.443716308205	160	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTCCTCCCTGGTCGTG	NA	False	NA	17	True	AATAAA	-13	NA	65953701	65979089	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr11_+_65953738_65958882_65958983_65959189_65959315_65959816_65962094_65964073_65964132_65964514_65964571_65965091_65965219_65965341_65965448_65965701_65965780_65965886_65965987_65966075_65966219_65966349_65966557_65967258_65967384_65967470_65967587_65967678_65967822_65976394_65976569_65976655_65976767_65977013_65977102_65977562_65977654_65977763_65977900_65978599_65978690_65978792_65978915_65979011
H1_mix_00015455	chr11	+	586	4	FSM	ENSG00000175467.15	ENST00000528573.1	585	4	-1	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	158.175711016438	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAACCCTATGGCCTTGCG	-5	True	NA	NA	False	NA	NA	NA	65961727	65965129	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65962094_65964005_65964132_65964514_65964571_65965091
H1_mix_00015457	chr11	+	2460	20	NIC	ENSG00000175467.15	novel	3557	20	NA	NA	114	-3	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	92.2783336364813	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTTTTCCTCCCTGGTC	115	False	NA	14	True	AATAAA	-10	NA	65961847	65979086	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_65962094_65964005_65964132_65964514_65964571_65965091_65965219_65965341_65965448_65965701_65965780_65965886_65965987_65966075_65966219_65966349_65966557_65967258_65967384_65967470_65967587_65967678_65967822_65976394_65976569_65976655_65976767_65977013_65977102_65977562_65977654_65977763_65977900_65978599_65978690_65978792_65978915_65979011
H1_mix_00015460	chr11	+	2192	17	NNC	ENSG00000087365.16	novel	3254	21	NA	NA	0	49488	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	528.921156547694	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAGAAAAAAAGATATT	2067	False	NA	NA	False	AAAAAG	-4	NA	66057269	66118796	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_66057376_66058053_66058151_66058313_66058406_66058829_66059046_66059200_66059339_66059514_66059596_66059781_66060010_66060581_66060732_66061685_66061776_66061890_66061999_66063008_66063117_66063399_66063543_66063627_66063730_66067945_66068046_66068147_66068334_66068673_66068892_66118767
H1_mix_00015462	chr11	+	541	2	FSM	ENSG00000175115.13	ENST00000533811.1	541	2	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGAGATTGGCAGCCTCAA	NA	False	NA	NA	False	NA	NA	NA	66220287	66221190	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66220792_66221153
H1_mix_00015464	chr11	+	3011	16	FSM	ENSG00000174996.12	ENST00000417856.5	3015	16	4	0	4	0	multi-exon	FALSE	canonical	1	3	junction_1	98.4633039371634	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGGCTTGTTTTGAGAC	17	False	NA	8	True	AATAAA	-16	NA	66257297	66267859	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66257489_66258546_66258823_66261741_66261973_66262122_66262193_66262813_66263037_66263659_66263748_66263850_66263953_66264045_66264220_66264344_66264445_66265022_66265073_66265167_66265236_66265654_66265764_66265853_66266013_66266092_66266218_66266432_66266491_66266872
H1_mix_00015465	chr11	+	1518	7	NIC	ENSG00000174871.11	novel	1374	6	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	84.5037803230654	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGCCCCGGTTCTGCTC	-13	True	NA	13	True	AATAAA	-13	NA	66278188	66284206	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_66278538_66281416_66281575_66282258_66282328_66282732_66282781_66283034_66283148_66283247_66283392_66283569
H1_mix_00015467	chr11	+	2677	2	FSM	ENSG00000179292.5	ENST00000327259.5	2538	2	-53	-86	-53	86	multi-exon	FALSE	canonical	2	5	junction_1	0	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAGGGACTCAGAATTGG	4	True	NA	90	True	NA	NA	NA	66291840	66296750	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66292089_66294321
H1_mix_00015471	chr11	+	640	6	FSM	ENSG00000174483.20	ENST00000534730.5	627	6	-13	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	12.1061967603372	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTGCAGATGCCAGTTCT	-11	True	NA	NA	False	NA	NA	NA	66510634	66515828	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66510707_66511012_66511090_66511204_66511240_66514405_66514679_66515539_66515587_66515692
H1_mix_00015474	chr11	+	3585	15	FSM	ENSG00000174483.20	ENST00000526760.5	3585	15	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	32.1244391676607	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAATGAGTTGCCCTGAG	1520	False	NA	21	True	ATTAAA	-30	NA	66510605	66533613	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66510707_66511012_66511090_66514405_66514679_66515539_66515587_66515692_66515732_66515860_66515934_66519616_66519749_66521269_66521377_66523455_66523577_66523723_66523883_66526122_66526193_66526648_66526808_66529818_66529953_66530893_66531029_66531655
H1_mix_00015478	chr11	+	1230	8	FSM	ENSG00000173992.9	ENST00000530961.5	1214	8	-16	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	79.8925298543651	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTTATTTTCGTTTGGG	2	True	NA	21	True	NA	NA	NA	66593184	66605998	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66593301_66593641_66593715_66599115_66599254_66599458_66599637_66600488_66600550_66605153_66605417_66605488_66605593_66605701
H1_mix_00015481	chr11	+	2056	3	FSM	ENSG00000248643.5	ENST00000421355.1	2034	3	-22	0	-17	0	multi-exon	TRUE	canonical	3	39	junction_1	180.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCCCAGTTACTAAGAAGA	-15	True	NA	NA	False	GATAAA	-36	NA	66616608	66644632	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66617058_66639699_66640124_66643449
H1_mix_00015482	chr11	+	829	2	FSM	ENSG00000248643.5	ENST00000500635.2	829	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTATGTGTGCTTTGCGA	46	False	NA	15	True	AATAAA	-15	NA	66616669	66646467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66617058_66646026
H1_mix_00015484	chr11	+	2302	3	FSM	ENSG00000173933.21	ENST00000409406.1	2321	3	19	0	19	0	multi-exon	FALSE	canonical	3	400	junction_1	40.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTATGTGTGCTTTGCGA	258	False	NA	15	True	AATAAA	-15	NA	66638953	66646467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66640124_66643449_66644141_66646026
H1_mix_00015485	chr11	+	2135	17	FSM	ENSG00000173715.18	ENST00000525908.6	2135	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	113.192020892596	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCGCGTCTGCTTCCGC	-16	True	NA	33	True	AATAAA	-24	NA	66744735	66843328	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66744920_66748378_66748518_66756352_66756506_66759042_66759097_66788159_66788270_66796280_66796365_66800640_66800697_66801030_66801103_66803997_66804191_66813864_66814016_66816052_66816200_66821642_66821765_66822563_66822675_66828265_66828365_66838366_66838446_66842848_66843070_66843168
H1_mix_00015486	chr11	+	817	6	FSM	ENSG00000173715.18	ENST00000527368.5	812	6	-5	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	113.850076855486	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCTTTGGGTAAGTTCTT	17	True	NA	NA	False	NA	NA	NA	66744768	66800686	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66744920_66759042_66759097_66762078_66762451_66788159_66788270_66796280_66796365_66800640
H1_mix_00015487	chr11	+	2172	18	NIC	ENSG00000173715.18	novel	2135	17	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	117.90818080331	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTCCTCTTCCGCGTCTG	19	True	NA	26	True	AATAAA	-17	NA	66744770	66843321	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_66744920_66748378_66748518_66756352_66756506_66759042_66759097_66788159_66788270_66796280_66796365_66800640_66800697_66801030_66801103_66803994_66804191_66813864_66814016_66816052_66816200_66821642_66821765_66822563_66822675_66828265_66828365_66838366_66838446_66839131_66839208_66842848_66843070_66843168
H1_mix_00015489	chr11	+	1642	14	NIC	ENSG00000173715.18	novel	1998	15	NA	NA	0	-1	combination_of_known_junctions	TRUE	canonical	0	0	junction_6	92.5039580154315	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTCCTCTTCCGCGTCTG	68	False	NA	26	True	AATAAA	-17	NA	66744819	66843321	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_66744920_66759042_66759097_66796280_66796365_66800640_66800697_66801030_66801103_66803994_66804191_66813864_66814016_66816052_66816200_66821642_66821765_66822563_66822675_66828265_66828365_66838369_66838446_66842848_66843070_66843168
H1_mix_00015490	chr11	+	1807	15	NIC	ENSG00000173715.18	novel	1998	15	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	113.334906451667	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTCCTCTTCCGCGTCTG	68	False	NA	26	True	AATAAA	-17	NA	66744819	66843321	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_66744920_66748378_66748518_66759042_66759097_66788159_66788270_66800640_66800697_66801030_66801103_66803994_66804191_66813864_66814016_66816052_66816200_66821642_66821765_66822563_66822675_66828265_66828365_66838369_66838446_66842848_66843070_66843168
H1_mix_00015491	chr11	+	1734	16	FSM	ENSG00000173715.18	ENST00000642265.1	1734	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	113.7271588789	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGTCCCCTTCCGCAAG	29	False	NA	-61	True	NA	NA	NA	66744889	66843234	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66744920_66748378_66748518_66759042_66759097_66788159_66788270_66796280_66796365_66800640_66800697_66801030_66801103_66803997_66804191_66813864_66814016_66816052_66816200_66821642_66821765_66822563_66822675_66828265_66828365_66838366_66838446_66842848_66843070_66843168
H1_mix_00015492	chr11	+	3237	22	NIC	ENSG00000173715.18	novel	1998	15	NA	NA	0	3010	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	118.851495592336	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGCCTTGGGCCTTTGGG	29	False	NA	27	True	ATTAAA	-19	NA	66744889	66846526	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_66744920_66759042_66759097_66788159_66788270_66796280_66796365_66800640_66800697_66801030_66801103_66803994_66804191_66813864_66814016_66816052_66816200_66821642_66821765_66822563_66822675_66828265_66828365_66838369_66838446_66842848_66843070_66843168_66843641_66843758_66843862_66843955_66844040_66844285_66844365_66844868_66845037_66845165_66845238_66845499_66845563_66845859
H1_mix_00015493	chr11	+	1821	15	FSM	ENSG00000173715.18	ENST00000525449.6	1821	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	122.967890283668	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTCTTCCGCGTCTGCTT	3533	False	NA	29	True	AATAAA	-20	NA	66748393	66843324	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66748518_66756352_66756506_66759042_66759097_66788159_66788270_66796280_66796365_66800640_66800697_66801030_66801103_66803997_66804191_66813864_66814016_66816052_66816200_66821642_66821765_66828265_66828365_66838366_66838446_66842848_66843070_66843168
H1_mix_00015499	chr11	+	3050	3	NIC	ENSG00000173621.9	novel	1550	3	NA	NA	-208	-6	intron_retention	FALSE	canonical	3	39	junction_1	71	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCAGTGCTAGTCTCTGG	NA	False	NA	12	True	AATAAA	-13	NA	66856438	66860469	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_66857297_66857734_66859094_66859636
H1_mix_00015500	chr11	+	524	4	FSM	ENSG00000173020.11	ENST00000531390.1	524	4	0	0	0	0	multi-exon	FALSE	canonical	3	511	junction_1	34.296096311712	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCACCCATGTGCCCCTG	29	False	NA	NA	False	NA	NA	NA	67282780	67284171	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67282819_67283127_67283229_67283706_67283774_67283853
H1_mix_00015501	chr11	+	410	3	FSM	ENSG00000173020.11	ENST00000532611.1	410	3	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_2	71	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGAGGCTCGCAAGAAAG	423	False	NA	NA	False	NA	NA	NA	67283174	67284323	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67283229_67283706_67283950_67284210
H1_mix_00015502	chr11	+	1491	5	FSM	ENSG00000172932.16	ENST00000512101.5	1491	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	22.9605640174626	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGGGTGAGAGCCTGCGAG	-20	True	NA	NA	False	NA	NA	NA	67289299	67291651	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67289551_67290077_67290214_67290321_67290447_67290591_67291522_67291602
H1_mix_00015507	chr11	+	948	9	FSM	ENSG00000172830.13	ENST00000532181.5	948	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	29.6308011197807	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGTCTCCTGGCTTTGCT	537	False	NA	NA	False	NA	NA	NA	67304122	67309543	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67304156_67304772_67305008_67306837_67306963_67307041_67307114_67307370_67307437_67307845_67307940_67308173_67308303_67308411_67308459_67309396
H1_mix_00015508	chr11	+	444	1	FSM	ENSG00000275484.1	ENST00000616071.1	517	1	6	67	6	-67	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGGTCCCCAAGGCTTG	1673	False	NA	NA	False	NA	NA	NA	67374421	67374865	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67374400_67374900
H1_mix_00015509	chr11	+	578	6	FSM	ENSG00000172613.8	ENST00000542139.1	578	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	33.422148345072	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACGAGGAGGAGGCAGGT	-8	True	NA	NA	False	NA	NA	NA	67391975	67395807	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67392079_67392160_67392232_67392653_67392783_67393495_67393611_67393722_67393791_67395715
H1_mix_00015510	chr11	+	1256	5	FSM	ENSG00000172613.8	ENST00000530934.5	1256	5	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	11.4318633651737	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACACTCTCAGACACCGAC	898	False	NA	NA	False	NA	NA	NA	67392881	67396315	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67393611_67393690_67393791_67395715_67395826_67395911_67396176_67396262
H1_mix_00015511	chr11	+	567	4	FSM	ENSG00000175634.15	ENST00000530623.5	569	4	2	0	2	0	multi-exon	FALSE	canonical	3	14	junction_1	182.073855588574	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGGGGAAGCTCTTGAGA	-24	True	NA	NA	False	NA	NA	NA	67428461	67431582	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67428624_67429119_67429241_67429526_67429596_67431367
H1_mix_00015514	chr11	+	5539	8	FSM	ENSG00000175634.15	ENST00000525088.5	5528	8	-11	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	148.224182113666	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGACCTGGCTCTTTGT	8	True	NA	27	True	ATTAAA	-14	NA	67428493	67435401	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67429241_67429526_67432658_67432736_67432838_67432951_67433195_67433339_67433448_67433994_67434276_67434376_67434485_67434581
H1_mix_00015519	chr11	+	329	1	FSM	ENSG00000254792.1	ENST00000528260.1	108	1	-224	3	-224	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAGTACAAATGAAAAATG	NA	False	NA	NA	False	AAAACA	-44	NA	67840717	67841046	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67840700_67841000
H1_mix_00015520	chr11	+	600	3	FSM	ENSG00000251637.6	ENST00000529069.5	600	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	6.5	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTGTGTGTTGCCTGAT	NA	False	NA	7	True	GATAAA	-14	NA	67886476	67894093	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67886690_67888152_67888325_67893878
H1_mix_00015521	chr11	+	531	5	FSM	ENSG00000110717.13	ENST00000531228.1	531	5	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	1009.91658071348	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCCGGGGAGGAGCGTTG	60	False	NA	NA	False	NA	NA	NA	68030742	68033223	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_68030962_68032151_68032210_68032285_68032337_68032922_68033013_68033110
H1_mix_00015523	chr11	+	606	5	FSM	ENSG00000110717.13	ENST00000529645.1	606	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	1150.69055353731	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGAGAGGGGGTTCTTGGC	18	False	NA	NA	False	NA	NA	NA	68032160	68035683	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_68032210_68032285_68032524_68032922_68033013_68033110_68033284_68035627
H1_mix_00015526	chr11	+	2836	18	NIC	ENSG00000110719.10	novel	2668	20	NA	NA	-16	-15	intron_retention	FALSE	canonical	3	106	junction_6	11.6595298652304	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCTTCCTGCACGCCCT	-22	True	NA	NA	False	NA	NA	NA	68039008	68050632	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_68039120_68041267_68041389_68041752_68041832_68042642_68042864_68042945_68043498_68043570_68043654_68043813_68043908_68044131_68044345_68044957_68045103_68047432_68047573_68047646_68047805_68047881_68047973_68048878_68048998_68049080_68049295_68049662_68049789_68049961_68050067_68050136_68050255_68050486
H1_mix_00015527	chr11	+	3097	18	NIC	ENSG00000110719.10	novel	2668	20	NA	NA	-16	-3	intron_retention	FALSE	canonical	3	106	junction_6	18.2303598637341	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGATGTCTCGTCTCTC	-22	True	NA	3	True	AATAAA	-15	NA	68039008	68050892	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_68039120_68041267_68041389_68041752_68041832_68042642_68042864_68042945_68043498_68043570_68043654_68043813_68043908_68044131_68044345_68044957_68045103_68047432_68047573_68047646_68047973_68048878_68048998_68049080_68049295_68049662_68049789_68049961_68050067_68050136_68050255_68050486_68050665_68050740
H1_mix_00015532	chr11	+	830	3	FSM	ENSG00000110719.10	ENST00000524870.1	830	3	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGCCTGTGGGCCCTGAG	5374	False	NA	NA	False	NA	NA	NA	68049147	68050220	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_68049789_68049961_68050067_68050136
H1_mix_00015533	chr11	+	525	2	FSM	ENSG00000110719.10	ENST00000530449.1	525	2	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGCGGCTGCACTGGTG	6279	False	NA	NA	False	NA	NA	NA	68050052	68050647	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_68050067_68050136
H1_mix_00015538	chr11	+	4788	22	FSM	ENSG00000110075.15	ENST00000265637.8	4783	22	-5	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	200.375814708715	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTGTACCTTGCTTGGA	1	True	NA	18	True	AATAAA	-24	NA	68460746	68615334	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_68460828_68537658_68537892_68544837_68545025_68548066_68548205_68551120_68551187_68554144_68554258_68558565_68558680_68564302_68564433_68567013_68567167_68569747_68569898_68571039_68571105_68574108_68574225_68575957_68576044_68587977_68588025_68590659_68590715_68591575_68591707_68596096_68596219_68600340_68600495_68601862_68601970_68603341_68603493_68609903_68610024_68613065
H1_mix_00015539	chr11	+	2965	24	NIC	ENSG00000110075.15	novel	5072	24	NA	NA	-23	19	combination_of_known_junctions	FALSE	canonical	3	200	junction_2	163.299266022704	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACTGCAGACCGCCACCA	NA	False	NA	NA	False	NA	NA	NA	68460707	68613143	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_68460828_68505144_68505272_68519500_68519652_68537658_68537892_68544837_68545025_68548066_68548205_68551120_68551187_68554144_68554258_68558565_68558680_68564302_68564433_68567013_68567167_68569747_68569898_68571039_68571105_68574108_68574225_68575957_68576044_68587926_68588025_68590659_68590715_68591575_68591707_68596096_68596219_68600340_68600495_68601862_68601970_68603341_68603493_68609903_68610024_68613065
H1_mix_00015540	chr11	+	4862	22	FSM	ENSG00000110075.15	ENST00000527403.6	4862	22	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_13	150.623661913873	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGATTCTTTGTTTCTA	NA	False	NA	-6	True	AATACA	-29	NA	68519505	68615310	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_68519652_68537658_68537892_68544837_68545025_68548066_68548205_68551120_68551187_68554144_68554258_68558565_68558680_68564302_68564433_68567013_68567167_68569747_68569898_68571039_68571105_68574108_68574225_68575957_68576044_68587944_68588025_68590659_68590715_68591575_68591707_68596096_68596219_68600340_68600495_68601862_68601970_68603341_68603493_68609903_68610024_68613065
H1_mix_00015543	chr11	+	358	3	FSM	ENSG00000132740.10	ENST00000674597.1	358	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	42	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAACTTCTGAGTTTTC	2168	False	NA	NA	False	NA	NA	NA	68906068	68908631	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_68906136_68908144_68908338_68908533
H1_mix_00015550	chr11	+	4969	25	FSM	ENSG00000162341.18	ENST00000294309.8	4969	25	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	13.2074789418723	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAATAGAAGAAACGTAATG	-11	True	NA	NA	False	AATAAA	-21	NA	69048931	69090597	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_69049107_69054032_69054098_69054720_69054798_69055174_69055353_69057577_69057695_69062883_69062991_69063894_69063968_69067502_69067606_69070429_69070496_69071355_69071421_69071922_69072024_69072626_69072709_69072914_69073002_69078481_69078602_69078733_69078794_69078891_69079021_69079833_69079884_69081399_69081500_69083944_69084017_69085209_69085287_69085670_69085753_69085847_69085931_69086522_69086605_69087111_69087207_69087874
H1_mix_00015551	chr11	+	1036	2	FSM	ENSG00000110092.4	ENST00000535993.1	568	2	-205	-263	-130	263	multi-exon	FALSE	canonical	3	441	junction_1	0	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCACTTGCAGAGTCTTT	78	False	NA	NA	False	NA	NA	NA	69641025	69643580	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_69641512_69643030
H1_mix_00015557	chr11	+	3590	16	NIC	ENSG00000131626.19	novel	4133	26	NA	NA	-60	857	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	82.703862599572	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAACATGAAATGGGTT	NA	False	NA	NA	False	NA	NA	NA	70270629	70349157	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_70271320_70272172_70272437_70324401_70324504_70324846_70325012_70325499_70325575_70326261_70326364_70326596_70326819_70330172_70330320_70331959_70332095_70333469_70333554_70335562_70335695_70337364_70337428_70338373_70338454_70339170_70339307_70343668_70343893_70348188
H1_mix_00015558	chr11	+	5245	28	NIC	ENSG00000131626.19	novel	5240	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	34	junction_14	58.6779123153677	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGAATACTGAGAATAAG	-23	True	NA	NA	False	AATAAA	-26	NA	70270689	70384396	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_70270915_70272172_70272437_70324401_70324504_70324846_70325012_70325499_70325575_70326261_70326364_70326596_70326819_70330172_70330320_70331959_70332095_70333469_70333554_70335562_70335695_70337364_70337428_70338373_70338454_70339170_70339312_70343668_70343893_70348188_70348421_70354300_70354453_70355638_70355812_70356160_70356255_70362094_70362177_70362287_70362489_70372214_70372391_70372476_70372575_70374917_70375094_70376531_70376601_70378029_70378196_70382087_70382159_70383002
H1_mix_00015559	chr11	+	2739	7	ISM	ENSG00000131626.19	ENST00000389547.7	4133	26	72239	15224	-795	561	internal_fragment	FALSE	canonical	3	226	junction_2	21.4223403638974	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTCTCTTGTGTCTGGCT	NA	False	NA	NA	False	TATAAA	-17	NA	70342955	70363356	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_70343893_70348188_70348421_70354300_70354453_70355638_70355812_70356160_70356255_70362094_70362177_70362287
H1_mix_00015561	chr11	+	2779	18	ISM	ENSG00000085733.16	ENST00000376561.7	2247	19	-12	17	0	0	intron_retention	FALSE	canonical	3	223	junction_17	183.967463649584	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTGATCCACTTGCGT	-26	True	NA	11	True	AATAAA	-2	NA	70398528	70436562	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_70398615_70405264_70405362_70407297_70407385_70407517_70407592_70409830_70409961_70414541_70414653_70415662_70415718_70417012_70417124_70419745_70419857_70420399_70420511_70422939_70422996_70425331_70425402_70429050_70429200_70431190_70431281_70433100_70433279_70433646_70433719_70435025_70435120_70435465
H1_mix_00015562	chr11	+	1556	1	FSM	ENSG00000279459.1	ENST00000624018.1	1556	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCCTGGCTCTGGCCCCC	NA	False	NA	NA	False	NA	NA	NA	70603303	70604859	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_70603300_70604900
H1_mix_00015563	chr11	+	530	2	FSM	ENSG00000172890.13	ENST00000533612.1	524	2	-6	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTTTGCGTCCCCACA	-24	True	NA	NA	False	NA	NA	NA	71453202	71455460	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_71453382_71455109
H1_mix_00015564	chr11	+	2292	20	NIC	ENSG00000172890.13	novel	2679	21	NA	NA	16	-7	combination_of_known_splicesites	FALSE	canonical	3	9	junction_11	37.5489339086096	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGAGGCTGGAATCCA	30	True	NA	15	True	AATAAA	-10	NA	71453256	71501532	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_71453382_71455109_71455171_71458427_71458545_71463431_71463486_71464052_71464143_71472448_71472501_71473277_71473367_71473568_71473687_71474394_71474527_71478394_71478470_71480754_71480880_71481922_71482026_71482848_71483018_71484311_71484448_71485541_71485649_71490844_71490977_71491833_71491904_71497482_71497612_71498351_71498529_71501301
H1_mix_00015566	chr11	+	301	1	FSM	ENSG00000184055.4	ENST00000532397.1	929	1	88	540	88	-540	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCACTACCCAGTCATCG	NA	False	NA	NA	False	NA	NA	NA	71593541	71593842	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_71593500_71593800
H1_mix_00015567	chr11	+	566	1	FSM	ENSG00000239481.1	ENST00000462701.1	778	1	189	23	189	-23	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAATCCAACAATCTGTT	NA	False	NA	NA	False	NA	NA	NA	71669708	71670274	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_71669700_71670300
H1_mix_00015574	chr11	+	2388	9	FSM	ENSG00000137522.18	ENST00000526549.5	2375	9	-13	0	4	0	multi-exon	FALSE	canonical	3	11	junction_3	99.183857053454	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTATCTTGCTTTCTT	-7	True	NA	28	True	AATAAA	-27	NA	71929037	71997595	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_71929125_71960749_71960892_71962151_71962290_71982760_71982916_71987003_71987112_71990596_71990718_71994718_71994853_71995449_71995552_71996194
H1_mix_00015576	chr11	+	2513	2	FSM	ENSG00000137522.18	ENST00000532379.1	634	2	-285	-1594	-285	519	multi-exon	FALSE	canonical	3	268	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCCCTTGGCCTGACTCT	NA	False	NA	NA	False	NA	NA	NA	71994960	71998116	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_71995552_71996194
H1_mix_00015577	chr11	+	2390	5	FSM	ENSG00000184154.16	ENST00000324866.11	2402	5	-23	35	0	8	multi-exon	FALSE	canonical	3	26	junction_3	5.71729831301464	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTCATTTGATAAAAAGAA	5	True	NA	-23	True	NA	NA	NA	72080835	72096860	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_72080886_72088296_72088381_72089028_72089166_72093495_72093702_72094947
H1_mix_00015579	chr11	+	4848	29	NIC	ENSG00000165458.15	novel	4789	28	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	65.8026967377416	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGAGTAAAACTTCAATAAA	-14	True	NA	NA	False	AATAAA	-17	NA	72223689	72239105	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_72223804_72224779_72225167_72228189_72228254_72228347_72228499_72228726_72228848_72229089_72229231_72229464_72229559_72229662_72229753_72229923_72230020_72230120_72230272_72230361_72230469_72230795_72230899_72230992_72231190_72231497_72231616_72232239_72232337_72232625_72232765_72232874_72232975_72233074_72233164_72233440_72233523_72233654_72233745_72234280_72234395_72234526_72234616_72235115_72235204_72235295_72235452_72235674_72235754_72235845_72235987_72237123_72237797_72238041_72238176_72238262
H1_mix_00015580	chr11	+	5181	29	NIC	ENSG00000165458.15	novel	4789	28	NA	NA	-187	0	combination_of_known_junctions	TRUE	canonical	3	94	junction_1	53.5189743198139	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGAGTAAAACTTCAATAAA	2250	False	NA	NA	False	AATAAA	-17	NA	72223513	72239105	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_72223961_72224779_72225167_72228189_72228254_72228347_72228499_72228726_72228848_72229089_72229231_72229464_72229559_72229662_72229753_72229923_72230020_72230120_72230272_72230361_72230469_72230795_72230899_72230992_72231190_72231497_72231616_72232239_72232337_72232625_72232765_72232874_72232975_72233074_72233164_72233440_72233523_72233654_72233745_72234280_72234395_72234526_72234616_72235115_72235204_72235295_72235452_72235674_72235754_72235845_72235987_72237123_72237797_72238041_72238176_72238262
H1_mix_00015585	chr11	+	643	3	FSM	ENSG00000110237.5	ENST00000536170.1	793	3	150	0	150	0	multi-exon	FALSE	canonical	1	2	junction_1	9.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGACCCTACCCCGCTC	171	False	NA	NA	False	NA	NA	NA	73343145	73353262	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_73343278_73346882_73346961_73352829
H1_mix_00015586	chr11	+	4473	21	FSM	ENSG00000110237.5	ENST00000643371.1	4962	21	222	267	150	-267	multi-exon	FALSE	canonical	1	2	junction_1	7.06045324324154	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGGGCTCAGTCTCCCT	171	False	NA	52	True	NA	NA	NA	73343145	73369121	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_73343278_73346882_73346961_73352829_73353013_73355532_73355650_73355860_73355954_73356174_73356352_73356708_73356760_73357024_73357135_73357241_73357328_73359833_73359953_73360319_73360534_73361087_73361162_73362039_73362240_73362432_73362735_73363205_73363456_73363746_73363834_73364171_73364240_73364451_73364601_73365389_73365565_73365677_73365948_73367583
H1_mix_00015587	chr11	+	351	2	FSM	ENSG00000110237.5	ENST00000537198.1	351	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCGAAAGTCAGGCTCCC	NA	False	NA	NA	False	NA	NA	NA	73356476	73357092	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_73356760_73357024
H1_mix_00015588	chr11	+	697	2	FSM	ENSG00000110237.5	ENST00000536481.1	697	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAGTGACTGATTTTAGA	NA	False	NA	NA	False	NA	NA	NA	73364213	73365122	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_73364240_73364451
H1_mix_00015589	chr11	+	3231	5	FSM	ENSG00000054967.13	ENST00000539134.1	3244	5	0	13	0	-13	multi-exon	FALSE	canonical	3	17	junction_1	6.01560470775798	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAAAACATTGAGATGTTT	2472	False	NA	NA	False	CATAAA	-5	NA	73393243	73397461	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_73393918_73394235_73394318_73394476_73394735_73395086_73395286_73395443
H1_mix_00015590	chr11	+	2104	3	FSM	ENSG00000054967.13	ENST00000545886.1	4346	3	2242	0	540	0	multi-exon	FALSE	canonical	3	29	junction_2	1.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAGGAGCTCCTTTTCTCT	3452	False	NA	12	True	AATAAA	-19	NA	73394223	73396644	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_73394318_73394476_73395286_73395443
H1_mix_00015593	chr11	+	1560	9	FSM	ENSG00000175581.14	ENST00000508278.6	1560	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	234.29278558035	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCCCACTACTCAGGAGG	-15	True	NA	NA	False	NA	NA	NA	73787871	73865133	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_73787993_73805026_73805080_73808312_73808351_73823012_73823071_73825707_73825797_73844806_73844977_73859906_73860010_73863171_73863262_73864295
H1_mix_00015595	chr11	+	661	6	FSM	ENSG00000175581.14	ENST00000542303.5	661	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	198.615205862995	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATATGTATGTGTGTGTGA	22	True	NA	21	True	AATAAA	-17	NA	73787908	73864602	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_73787993_73805026_73805080_73808312_73808351_73825707_73825797_73863171_73863262_73864295
H1_mix_00015599	chr11	+	2496	14	FSM	ENSG00000214517.10	ENST00000398427.6	2496	14	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_9	135.798711116227	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTCTGGTCTTTCTCTGT	4	True	NA	21	True	AATAAA	-17	NA	74171321	74254703	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_74171523_74203727_74203822_74204352_74204446_74222311_74222370_74225204_74225257_74230244_74230400_74230911_74231003_74235900_74235967_74239132_74239257_74246033_74246206_74247078_74247124_74250953_74251019_74251647_74251716_74253491
H1_mix_00015601	chr11	+	3618	5	FSM	ENSG00000214517.10	ENST00000541340.5	3618	5	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_1	25.2227575812004	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTCTGGTCTTTCTCTGT	7141	False	NA	21	True	AATAAA	-17	NA	74237787	74254703	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_74239257_74246075_74246206_74247078_74247124_74250953_74251716_74253491
H1_mix_00015603	chr11	+	854	6	FSM	ENSG00000077514.9	ENST00000530511.5	854	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	158.049359378645	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAACGAAAACAGAGGCTA	33	True	NA	NA	False	AAGAAA	-8	NA	74592643	74618770	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_74592932_74594060_74594117_74604691_74604795_74611498_74611539_74612877_74613011_74618536
H1_mix_00015605	chr11	+	395	1	FSM	ENSG00000241170.3	ENST00000462248.1	379	1	-157	141	-157	13	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCATGCCGAATCCATGT	NA	False	NA	NA	False	NA	NA	NA	74919429	74919824	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_74919400_74919800
H1_mix_00015607	chr11	+	6328	2	NNC	ENSG00000162139.10	novel	2468	4	NA	NA	7100	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTATTGTTTTTTTTTTCTT	7028	False	NA	16	True	AATAAA	-17	NA	74996043	75010906	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_74996878_75005412
H1_mix_00015609	chr11	+	384	3	FSM	ENSG00000137491.15	ENST00000526839.1	649	3	0	265	0	-265	multi-exon	FALSE	canonical	2	3	junction_1	0	1034	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGACATTAACCAGATGCC	3144	False	NA	NA	False	NA	NA	NA	75165873	75169739	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_75165950_75169172_75169407_75169665
H1_mix_00015610	chr11	+	1397	5	FSM	ENSG00000149273.15	ENST00000529173.5	1373	5	-24	0	-24	0	multi-exon	FALSE	canonical	3	17519	junction_1	568.937771201737	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGCATAACAGGTATGTC	NA	False	NA	NA	False	NA	NA	NA	75399490	75404855	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_75399578_75400693_75400825_75401639_75402447_75404019_75404208_75404671
H1_mix_00015611	chr11	+	1882	4	FSM	ENSG00000149273.15	ENST00000530164.5	1878	4	-4	0	0	0	multi-exon	FALSE	canonical	3	17519	junction_1	1371.39401907532	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGTTTTGTTTTTTAA	-6	True	NA	NA	False	ATTAAA	-18	NA	75399514	75403945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_75399578_75400693_75400825_75401639_75401734_75402351
H1_mix_00015613	chr11	+	1268	6	FSM	ENSG00000149257.16	ENST00000533449.6	1268	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	670.706910654721	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGCGAGGAGCTGCGCAGC	319	False	NA	NA	False	NA	NA	NA	75562808	75571940	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_75562885_75563726_75563771_75566315_75566972_75568730_75568830_75568938_75569172_75571780
H1_mix_00015614	chr11	+	2169	1	FSM	ENSG00000179240.13	ENST00000663165.1	8777	1	24	6584	-8	-6584	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAATCACGCCTGTAATC	7	True	NA	NA	False	NA	NA	NA	76381339	76383508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_76381300_76383500
H1_mix_00015615	chr11	+	5348	2	FSM	ENSG00000179240.13	ENST00000321844.6	5363	2	15	0	-8	0	multi-exon	TRUE	canonical	1	1	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTTTTACTGGGAGAAAA	7	True	NA	NA	False	ATTAAA	-25	NA	76381339	76408136	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_76382211_76403659
H1_mix_00015616	chr11	+	6848	20	FSM	ENSG00000158636.16	ENST00000529032.5	6848	20	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	11.6898990420015	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTTTATCAGCTGATGGA	35	False	NA	NA	False	AATATA	-15	NA	76446938	76553025	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_76447009_76451857_76451958_76453313_76453389_76458182_76458359_76459935_76460086_76463820_76464081_76472563_76472841_76496214_76496470_76513385_76513536_76516141_76516313_76523154_76523292_76526461_76526636_76528267_76528467_76535894_76536060_76537794_76537951_76539598_76539641_76542215_76542368_76544258_76544823_76545796_76546298_76549951
H1_mix_00015617	chr11	+	1400	6	FSM	ENSG00000078124.13	ENST00000530182.6	1695	6	-17	312	0	160	multi-exon	FALSE	canonical	3	110	junction_5	9.56242647030554	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTCAGCTGCAGGTAGAT	-2	True	NA	NA	False	AATATA	-35	NA	76860917	76991477	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_76861080_76926556_76926668_76958978_76959032_76976288_76976342_76985642_76985725_76990538
H1_mix_00015618	chr11	+	480	5	FSM	ENSG00000078124.13	ENST00000525325.1	560	5	80	0	80	0	multi-exon	FALSE	canonical	3	87	junction_1	15.6744218394172	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGGAAGCATTGATGAAT	NA	False	NA	NA	False	NA	NA	NA	76998633	77020312	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_76998822_77015015_77015118_77016674_77016780_77019730_77019777_77020273
H1_mix_00015619	chr11	+	4013	2	FSM	ENSG00000078124.13	ENST00000680624.1	5366	2	1353	0	-142	0	multi-exon	FALSE	canonical	3	114	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTACTAAAAATACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77019394	77023904	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_77019777_77020273
H1_mix_00015620	chr11	+	531	3	FSM	ENSG00000149260.18	ENST00000533889.1	542	3	0	11	0	-11	multi-exon	FALSE	canonical	3	105	junction_2	12	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGGGCTGGTGCAGGCAC	NA	False	NA	NA	False	NA	NA	NA	77084964	77112900	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_77085052_77093681_77093814_77112588
H1_mix_00015621	chr11	+	2564	4	FSM	ENSG00000149260.18	ENST00000527129.1	2564	4	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	26.1321428300262	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGCCTTGGGCCTCGCC	NA	False	NA	-23	True	AATAAA	-43	NA	77119406	77124495	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_77120910_77121933_77122050_77122575_77122713_77123687
H1_mix_00015622	chr11	+	1578	11	FSM	ENSG00000137474.23	ENST00000409893.6	1849	11	0	271	0	-271	multi-exon	FALSE	canonical	3	7	junction_3	2.2561028345357	193	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGCGGGGACACCAGGGC	226	False	NA	NA	False	NA	NA	NA	77174755	77184725	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_77174915_77175371_77175465_77177548_77177644_77179044_77179130_77179734_77179954_77180373_77180482_77181379_77181590_77181950_77182155_77182423_77182601_77183067_77183158_77184587
H1_mix_00015624	chr11	+	606	5	FSM	ENSG00000087884.15	ENST00000533193.5	606	5	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_2	151.972653790082	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGACTGTCACTCACCA	NA	False	NA	29	True	AATAAA	-17	NA	77841018	77872354	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_77841061_77842478_77842629_77855344_77855483_77869721_77869818_77872174
H1_mix_00015625	chr11	+	499	1	FSM	ENSG00000254471.1	ENST00000528393.1	2118	1	1196	423	1196	-423	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCGAGACACAGCCTCCA	NA	False	NA	NA	False	NA	NA	NA	79988708	79989207	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_79988700_79989200
H1_mix_00015626	chr11	+	388	1	FSM	ENSG00000227097.5	ENST00000473748.1	210	1	-30	-148	-30	148	mono-exon	FALSE	NA	NA	NA	NA	NA	342	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	0	True	NA	79	True	AATAAA	-28	NA	82689528	82689916	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_82689500_82689900
H1_mix_00015627	chr11	+	3414	5	FSM	ENSG00000165490.13	ENST00000524921.5	607	5	26	-2833	-6	0	multi-exon	TRUE	canonical	3	34	junction_4	63.4207182236215	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTAGTCTTTTTTAAT	-20	True	NA	15	True	AATAAA	-14	NA	82901723	82934655	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_82901823_82913286_82913387_82914722_82914852_82928776_82928939_82931731
H1_mix_00015628	chr11	+	3278	4	FSM	ENSG00000165490.13	ENST00000528759.5	3278	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	79.7050116924205	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTAGTCTTTTTTAAT	792	False	NA	15	True	AATAAA	-14	NA	82901697	82934655	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_82901823_82913286_82913387_82914722_82914852_82931731
H1_mix_00015630	chr11	+	704	1	FSM	ENSG00000242279.1	ENST00000474462.1	794	1	-9	99	-9	-99	mono-exon	FALSE	NA	NA	NA	NA	NA	867	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCACCATCAATGGGGAGG	NA	False	NA	NA	False	NA	NA	NA	82957413	82958117	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_82957400_82958100
H1_mix_00015631	chr11	+	688	2	FSM	ENSG00000246067.9	ENST00000533708.1	825	2	-52	189	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTGAAACCAAAGTTAATT	-19	True	NA	NA	False	GATAAA	-19	NA	83072065	83073194	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_83072182_83072622
H1_mix_00015634	chr11	+	3257	11	FSM	ENSG00000137494.14	ENST00000533342.6	3310	11	12	41	12	-41	multi-exon	FALSE	canonical	3	7	junction_6	19.1112532294457	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGTTGATTTTCCAAGAA	-24	True	NA	NA	False	AATATA	-39	NA	83193723	83248930	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_83194729_83198478_83198643_83206057_83206166_83210299_83210420_83211294_83211431_83224854_83225056_83227746_83227873_83236403_83236510_83240758_83240935_83245497_83245625_83247942
H1_mix_00015639	chr11	+	811	1	FSM	ENSG00000254783.1	ENST00000524828.1	742	1	75	-144	75	144	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGCAAACTCCTTGGGC	NA	False	NA	NA	False	NA	NA	NA	86284001	86284812	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_86284000_86284800
H1_mix_00015641	chr11	+	616	5	FSM	ENSG00000166575.17	ENST00000529023.5	1095	5	0	479	0	-2	multi-exon	FALSE	canonical	3	186	junction_2	19.9546360528074	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGATGAGAATTTTGATA	28	True	NA	NA	False	AAGAAA	-8	NA	87037891	87157406	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_87038187_87067693_87067822_87071522_87071616_87091361_87091396_87157340
H1_mix_00015643	chr11	+	8118	1	FSM	ENSG00000280385.1	ENST00000623539.1	4507	1	-2377	-1234	-2377	1234	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGGGCGCGGTGGCTCAC	NA	False	NA	NA	False	CATAAA	-22	NA	90191236	90199354	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_90191200_90199400
H1_mix_00015644	chr11	+	256	1	FSM	ENSG00000280367.1	ENST00000623330.1	3386	1	38	3092	38	-3092	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGGATAAGTGCACAGTA	20	True	NA	NA	False	NA	NA	NA	90223190	90223446	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_90223200_90223400
H1_mix_00015645	chr11	+	7894	8	FSM	ENSG00000165323.16	ENST00000533797.1	7894	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	5.12297745058317	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	92844339	92896305	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_92844733_92857213_92857349_92859164_92859323_92866740_92867210_92880730_92880885_92882737_92883394_92886999_92887114_92890490
H1_mix_00015646	chr11	+	729	1	FSM	ENSG00000255445.1	ENST00000527756.1	676	1	8	-61	8	61	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATTGATAAAAACACTTTT	NA	False	NA	NA	False	AATAGA	-13	NA	93152082	93152811	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_93152100_93152800
H1_mix_00015648	chr11	+	448	3	ISM	ENSG00000166004.15	ENST00000325212.11	8014	30	-24	62555	-24	-27817	5prime_fragment	FALSE	canonical	3	26	junction_1	1	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGAGTGAGATCTTAT	-32	True	NA	NA	False	NA	NA	NA	93661657	93667803	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_93661775_93666681_93666816_93667606
H1_mix_00015649	chr11	+	7516	27	NIC	ENSG00000166004.15	novel	8014	30	NA	NA	7132	-101	combination_of_known_junctions	TRUE	canonical	3	18	junction_3	10.7491571157103	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACATGCTGACTTTCT	7124	False	NA	-95	True	AAAACA	-20	NA	93668813	93730255	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_93668933_93669676_93669771_93675570_93675667_93679411_93679553_93683558_93683743_93683963_93684129_93687643_93687866_93691682_93691776_93691926_93692031_93695496_93695674_93696319_93696418_93696681_93700187_93702459_93702638_93702775_93702920_93706744_93706898_93721311_93721413_93721953_93722051_93723040_93723290_93724253_93724376_93725650_93725832_93726975_93727638_93728680_93728822_93729433_93729531_93729613_93729782_93729869_93729970_93730048_93730149_93730230
H1_mix_00015650	chr11	+	345	1	FSM	ENSG00000254911.3	ENST00000530422.1	353	1	9	-1	9	1	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGACAACTGCTGGGGT	3	True	NA	21	True	NA	NA	NA	93721521	93721866	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_93721500_93721900
H1_mix_00015652	chr11	+	2423	8	FSM	ENSG00000182919.15	ENST00000617482.4	2417	8	-6	0	-3	0	multi-exon	FALSE	canonical	3	20	junction_5	67.1629149371671	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTCCAGACAAAATAATATT	NA	False	NA	29	True	AATAAA	-34	NA	93741587	93763102	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_93741729_93747296_93747449_93750345_93750445_93753681_93753756_93753935_93754038_93757315_93757466_93759741_93759859_93761514
H1_mix_00015653	chr11	+	2522	9	FSM	ENSG00000182919.15	ENST00000331239.8	2522	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	60.5535661625308	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTTTGTAATATCTTAC	-18	True	NA	10	True	AATAAA	-15	NA	93741641	93763083	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_93741729_93747301_93747449_93750345_93750445_93753681_93753756_93753935_93754038_93755209_93755387_93757315_93757466_93759741_93759859_93761514
H1_mix_00015654	chr11	+	2582	10	NNC	ENSG00000182919.15	novel	1862	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	83.2025640630544	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTTTGTAATATCTTAC	-18	True	NA	10	True	AATAAA	-15	NA	93741641	93763083	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_93741729_93741962_93742018_93747296_93747449_93750345_93750445_93753681_93753756_93753935_93754038_93755209_93755387_93757315_93757466_93759741_93759859_93761514
H1_mix_00015657	chr11	+	1997	3	NIC	ENSG00000168876.9	novel	1908	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	49	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAGGCATGAATTCATT	39	False	NA	1	True	AATAAA	-19	NA	94494028	94499577	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_94494171_94496603_94496952_94498070
H1_mix_00015658	chr11	+	4228	3	NNC	ENSG00000168876.9	novel	1844	2	NA	NA	601	2343	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	51.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATTGTTTTTTTAAAAAG	640	False	NA	NA	False	AATAAA	-25	NA	94494629	94501921	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_94494659_94496603_94496952_94498070
H1_mix_00015660	chr11	+	4547	2	FSM	ENSG00000263465.5	ENST00000638426.1	560	2	-1271	-2716	-132	579	multi-exon	FALSE	canonical	3	73	junction_1	0	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTAGCTAAATTCTTCA	8577	False	NA	63	True	NA	NA	NA	95066786	95071804	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_95068184_95068654
H1_mix_00015661	chr11	+	4671	2	FSM	ENSG00000149218.5	ENST00000278505.5	4651	2	-20	0	-20	0	multi-exon	FALSE	canonical	2	7	junction_1	0	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGTTAGCAGTTCTGTAAA	-16	True	NA	8	True	AATAAA	-15	NA	95089825	95132645	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_95090228_95128376
H1_mix_00015662	chr11	+	1858	3	FSM	ENSG00000245552.8	ENST00000668554.2	1946	3	0	88	0	-88	multi-exon	FALSE	canonical	2	3	junction_2	2.5	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTAATCCTTATGCTATT	450	False	NA	NA	False	CATAAA	-28	NA	95231253	95234303	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_95232177_95232589_95232675_95233453
H1_mix_00015664	chr11	+	894	6	FSM	ENSG00000166037.11	ENST00000541365.5	870	6	-24	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	190.864978453356	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAAGTTAAAATGTGAGAA	-4	True	NA	NA	False	NA	NA	NA	95790497	95818903	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_95790744_95799236_95799389_95812931_95813112_95813467_95813590_95817786_95817904_95818826
H1_mix_00015669	chr11	+	7004	11	FSM	ENSG00000110318.15	ENST00000263468.13	7048	11	12	32	10	-32	multi-exon	FALSE	canonical	1	4	junction_4	3.9293765408777	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGCAATAAAAATGATTCA	5	True	NA	NA	False	ACTAAA	-27	NA	101915021	102001030	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_101915413_101922640_101922761_101944264_101944411_101948030_101948143_101958167_101958367_101961740_101963881_101978346_101978460_101981888_101981965_101986831_101987042_101992777_101992843_101997598
H1_mix_00015671	chr11	+	7764	8	Fusion	ENSG00000260008.1_ENSG00000137693.14	novel	5350	8	NA	NA	167	0	intron_retention	FALSE	canonical	3	12	junction_5	51.0509949132498	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTTGTTTTTAACAATT	NA	False	NA	NA	False	AATATA	-19	NA	102108052	102233423	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr11_+_102111170_102114143_102114395_102162455_102162572_102186017_102186138_102205892_102206087_102223621_102223753_102227468_102227582_102229701
H1_mix_00015672	chr11	+	5713	9	NNC	ENSG00000137693.14	novel	1638	9	NA	NA	-798	0	intron_retention	FALSE	canonical	3	23	junction_4	45.6698409784838	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTTGTTTTTAACAATT	21	False	NA	NA	False	AATATA	-19	NA	102111715	102233423	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_102112746_102114143_102114395_102162455_102162572_102186017_102186138_102205892_102206075_102209516_102209565_102223621_102223753_102227468_102227582_102229701
H1_mix_00015677	chr11	+	5099	39	ISM	ENSG00000187240.17	ENST00000375735.7	13683	89	94238	237	-1247	1	3prime_fragment	TRUE	canonical	2	13	junction_10	9.44630546725064	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTCTTCCCATGACTCTT	1350	False	NA	10	True	AATAAA	-19	NA	103203663	103479626	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_103203777_103204821_103204965_103209875_103209961_103211788_103211944_103215720_103215859_103219914_103220029_103220622_103220784_103222029_103222154_103222964_103223087_103231259_103231347_103234033_103234161_103235671_103235814_103236429_103236540_103243692_103243792_103245250_103245375_103253284_103253449_103255414_103255535_103256105_103256241_103257607_103257752_103259887_103259978_103280347_103280414_103282178_103282230_103283007_103283086_103286254_103286387_103287532_103287606_103303092_103303254_103304594_103304721_103307720_103307832_103311877_103312034_103316544_103316621_103321028_103321238_103323885_103323991_103358242_103358360_103399662_103399873_103435942_103436033_103455185_103455296_103456274_103456357_103468588_103468706_103479094
H1_mix_00015678	chr11	+	649	2	FSM	ENSG00000187240.17	ENST00000527252.1	956	2	200	107	200	1	multi-exon	FALSE	canonical	3	49	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTCTTCCCATGACTCTT	NA	False	NA	10	True	AATAAA	-19	NA	103468588	103479626	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_103468706_103479094
H1_mix_00015680	chr11	+	998	4	FSM	ENSG00000152578.13	ENST00000525032.1	1439	4	0	441	0	-441	multi-exon	FALSE	canonical	3	29	junction_2	26.3986531642978	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTCCTAGATTTTATAT	0	True	NA	NA	False	AATAGA	-38	NA	105610671	105862208	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_105611086_105612275_105612435_105752980_105753221_105862023
H1_mix_00015681	chr11	+	2778	10	FSM	ENSG00000152578.13	ENST00000428631.6	2778	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	18.4216726898335	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATTCATAAATATTTATT	12	True	NA	NA	False	AATAAA	-18	NA	105610723	105913110	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_105611086_105612275_105612435_105752980_105753221_105862023_105862209_105887518_105887573_105898268_105898428_105903813_105903982_105905196_105905302_105910434_105910546_105911875
H1_mix_00015683	chr11	+	1365	6	FSM	ENSG00000075239.14	ENST00000299355.10	1345	6	-20	0	-6	0	multi-exon	FALSE	canonical	0	0	junction_5	142.28225469116	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTATAATGCAAGTGATTT	4840	False	NA	NA	False	ATTAAA	-16	NA	108121546	108136939	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_108121679_108131906_108131955_108133819_108133938_108134220_108134317_108135141_108135243_108136069
H1_mix_00015691	chr11	+	1097	5	FSM	ENSG00000214290.9	ENST00000398035.6	1414	5	424	-107	-58	0	multi-exon	FALSE	canonical	1	2	junction_1	8.41130192063036	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGATTTTTTTTAATT	365	False	NA	11	True	AATAAA	-18	NA	111299674	111308735	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_111299725_111300526_111300622_111304927_111304983_111306393_111306624_111308068
H1_mix_00015692	chr11	+	1315	5	FSM	ENSG00000214290.9	ENST00000526216.1	1332	5	17	0	17	0	multi-exon	FALSE	canonical	0	0	junction_1	9.2736184954957	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGATTTTTTTTAATT	440	False	NA	11	True	AATAAA	-18	NA	111299749	111308735	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_111300018_111300526_111300622_111304927_111304983_111306393_111306624_111308068
H1_mix_00015693	chr11	+	2404	6	FSM	ENSG00000204381.12	ENST00000436913.6	2590	6	185	1	-16	-1	multi-exon	FALSE	canonical	3	4	junction_2	16.1319558640606	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACTAGTCTGGGTCAAAG	-32	True	NA	NA	False	NA	NA	NA	111540692	111561744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_111540929_111543922_111544221_111554560_111554594_111555206_111555291_111557540_111557644_111560094
H1_mix_00015694	chr11	+	539	4	FSM	ENSG00000137720.8	ENST00000528125.5	534	4	-5	0	-5	0	multi-exon	TRUE	canonical	2	4	junction_1	58.8179866669674	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATAAGATCTTAATATTG	-18	True	NA	NA	False	NA	NA	NA	111878929	111883900	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_111879041_111882367_111882599_111883135_111883203_111883770
H1_mix_00015695	chr11	+	1797	6	FSM	ENSG00000150764.14	ENST00000529225.5	1945	6	123	25	123	-25	multi-exon	FALSE	canonical	2	3	junction_1	20.0459472213213	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACCATTAAACATTATAAA	3033	False	NA	NA	False	TATAAA	-19	NA	111927266	111975970	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_111927388_111929817_111929911_111964548_111964679_111968512_111968639_111974022_111974255_111974875
H1_mix_00015696	chr11	+	6024	20	FSM	ENSG00000150764.14	ENST00000440460.7	5826	20	-157	-41	-157	41	multi-exon	FALSE	canonical	3	29	junction_5	8.47646244092814	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATGTGGAGTGGAGATAA	9	True	NA	55	True	NA	NA	NA	111937185	112022694	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_111937560_111964548_111964679_111968512_111968639_111974022_111974255_111974875_111974984_111980736_111980850_111982338_111982488_111985231_111985322_111986870_111986925_111989004_111989056_111992414_111992520_111992950_111993005_111993495_111993589_111993668_111993741_111995018_111995109_111995402_111995565_111996079_111996147_112016690_112016797_112017776_112017886_112018955
H1_mix_00015697	chr11	+	5862	21	NNC	ENSG00000150764.14	novel	5826	20	NA	NA	0	-64	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	15.7634862895236	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGATTTTCACTTGCGT	-19	True	NA	10	True	AATAAA	-25	NA	111937342	112022589	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_111937560_111964548_111964679_111968512_111968639_111974022_111974255_111974875_111974984_111980736_111980850_111982338_111982488_111984973_111985074_111985231_111985322_111986870_111986925_111989004_111989056_111992414_111992520_111992950_111993005_111993495_111993589_111993668_111993741_111995018_111995109_111995402_111995565_111996079_111996147_112016690_112016797_112017776_112017886_112018955
H1_mix_00015700	chr11	+	3739	6	FSM	ENSG00000150776.18	ENST00000532163.5	3739	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	32.2117990804612	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCATCTTTTACTTTTT	NA	False	NA	9	True	AATAAA	-19	NA	112074286	112085150	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_112074917_112075566_112075685_112078214_112078316_112080408_112080559_112081981_112082036_112082464
H1_mix_00015702	chr11	+	508	2	FSM	ENSG00000197580.13	ENST00000532673.1	619	2	111	0	111	0	multi-exon	FALSE	canonical	2	3	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGAGCATAAAGGGCACC	NA	False	NA	NA	False	AATAAA	-38	NA	112216219	112218157	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_112216331_112217760
H1_mix_00015703	chr11	+	696	6	FSM	ENSG00000150787.8	ENST00000524931.1	696	6	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_1	175.503162364671	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGGTGTGGGATTATT	1880	False	NA	27	True	ATTAAA	-22	NA	112228272	112233810	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_112228359_112228593_112228674_112230207_112230231_112230625_112230683_112233162_112233234_112233431
H1_mix_00015705	chr11	+	691	5	FSM	ENSG00000149292.17	ENST00000429951.5	669	5	-22	0	-22	0	multi-exon	FALSE	canonical	2	3	junction_1	13.7727085208393	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTGTCAGTCCTTACTT	6	False	NA	NA	False	AAAACA	-16	NA	113314556	113324682	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_113314619_113315950_113316316_113323287_113323452_113323993_113324016_113324604
H1_mix_00015709	chr11	+	904	1	FSM	ENSG00000270179.1	ENST00000602900.1	640	1	-291	27	-291	-27	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGAAAGAATAAAGCCTGC	NA	False	NA	NA	False	NA	NA	NA	113368186	113369090	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_113368200_113369100
H1_mix_00015711	chr11	+	718	4	FSM	ENSG00000076053.12	ENST00000544313.5	712	4	-6	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	271.57851330488	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACATTGTTTTTATAGGGT	-11	True	NA	NA	False	NA	NA	NA	114400606	114407819	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_114400768_114402827_114402916_114405705_114405800_114407444
H1_mix_00015712	chr11	+	1908	5	FSM	ENSG00000076053.12	ENST00000542140.5	1908	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	261.32678297488	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGGGTGTGTGTTATTTT	3	True	NA	6	True	TATAAA	-2	NA	114400665	114408909	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_114400768_114401697_114401861_114402831_114402916_114405705_114405800_114407444
H1_mix_00015714	chr11	+	745	7	FSM	ENSG00000255663.1	ENST00000544347.1	729	7	-16	0	-16	0	multi-exon	FALSE	canonical	2	5	junction_5	278.001648676166	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGTAACATTACCAAATAACA	3	True	NA	NA	False	NA	NA	NA	114400665	114443932	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_114400768_114401697_114401861_114402827_114402916_114405705_114405800_114431528_114431666_114440655_114440740_114443855
H1_mix_00015719	chr11	+	449	2	ISM	ENSG00000254851.1	ENST00000528464.1	822	5	1839	499	1839	-499	internal_fragment	FALSE	canonical	3	104	junction_1	0	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGGAGGGGGCAGAGGGAA	NA	False	NA	NA	False	NA	NA	NA	117137366	117138083	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_117137517_117137784
H1_mix_00015720	chr11	+	471	5	FSM	ENSG00000168092.14	ENST00000533206.1	685	5	0	214	0	-214	multi-exon	FALSE	canonical	3	203	junction_1	13.1220234720107	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTAGAGAGTTTGTTATCT	68	False	NA	NA	False	NA	NA	NA	117144381	117163908	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_117144419_117152440_117152529_117159933_117160024_117161144_117161262_117163769
H1_mix_00015721	chr11	+	7000	6	FSM	ENSG00000149591.17_ENSG00000280143.1	ENST00000525531.5	1048	6	-201	-5751	-189	0	multi-exon	FALSE	canonical	3	10	junction_1	614.659450427633	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACTACTGAAGAGGAA	6597	False	NA	NA	False	ATTAAA	-15	NA	117199180	117210292	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_117199433_117199632_117199830_117203001_117203194_117203306_117203485_117203781_117203885_117204214
H1_mix_00015724	chr11	+	5728	32	NIC	ENSG00000110274.16	novel	5690	16	NA	NA	-13	-5	combination_of_known_junctions	FALSE	canonical	2	6	junction_12	12.7145888659924	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAAGCTGTGGGGTTGCCC	55	False	NA	25	True	AATAAA	-26	NA	117327915	117413261	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_117328209_117335604_117335681_117338565_117338669_117344165_117344278_117351789_117351989_117361834_117361994_117362403_117362539_117363428_117363507_117371079_117371467_117373750_117373832_117375707_117375792_117380613_117380715_117381700_117381869_117387202_117387413_117390776_117390909_117390998_117391216_117392225_117392304_117392495_117392628_117393003_117393127_117394349_117394494_117394919_117395004_117395122_117395192_117395546_117395723_117396053_117396181_117396549_117396612_117397090_117397314_117407924_117408033_117408889_117409029_117409617_117409966_117410827_117410895_117411794_117411918_117412071
H1_mix_00015727	chr11	+	1159	2	FSM	ENSG00000167283.9	ENST00000527186.1	1582	2	423	0	423	0	multi-exon	FALSE	canonical	3	7190	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTCCCCAAGAGAGAACAG	4929	False	NA	NA	False	AATATA	-1	NA	118406549	118409610	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_118407098_118408999
H1_mix_00015728	chr11	+	908	7	FSM	ENSG00000118058.24	ENST00000533790.3	1672	7	252	512	-188	-356	multi-exon	FALSE	canonical	1	1	junction_2	7.4535599249993	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCTAAGACCAGTGAAAAGA	257	False	NA	NA	False	AAAAAG	-12	NA	118436743	118481736	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_118436945_118468774_118468845_118474178_118474316_118476804_118476983_118477966_118478202_118480173_118480239_118481714
H1_mix_00015729	chr11	+	11806	23	ISM	ENSG00000118058.24	ENST00000389506.10	13678	36	54770	-2911	-484	-4	3prime_fragment	FALSE	canonical	0	0	junction_19	20.5225636759814	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACATGGTTAAGCTTCCT	NA	False	NA	7	True	AATAAA	-18	NA	118491259	118526828	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_118491310_118491743_118491929_118493056_118493231_118494287_118494399_118494693_118494768_118495699_118495894_118496260_118496368_118497935_118498074_118498369_118498529_118499302_118499421_118499834_118499914_118500986_118501148_118501671_118501858_118502397_118506647_118507528_118507610_118509135_118509201_118509947_118510119_118511950_118512026_118519617_118519793_118519956_118520065_118520801_118520886_118521287_118521418_118521896
H1_mix_00015731	chr11	+	1255	1	FSM	ENSG00000243431.1	ENST00000465511.1	891	1	-65	-299	-65	299	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAATCCCAGCACTCTAAG	NA	False	NA	NA	False	ATTAAA	-35	NA	118560624	118561879	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_118560600_118561900
H1_mix_00015732	chr11	+	4053	11	FSM	ENSG00000095139.15	ENST00000359415.8	4038	11	-15	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	432.138507888385	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTATTGGATTATTGA	1	True	NA	13	True	AATAAA	-17	NA	118572408	118602928	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_118572551_118573619_118573784_118581245_118581510_118583178_118583359_118583808_118584015_118584479_118584645_118590340_118590507_118592708_118592857_118593589_118593699_118597706_118597912_118600624
H1_mix_00015734	chr11	+	5219	19	NIC	ENSG00000019144.20	novel	5242	18	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_6	60.2391581352156	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGAGTGGAAGGCCGGT	-37	True	NA	40	True	AATAAA	-15	NA	118621367	118658025	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_118621539_118624933_118625060_118627304_118628651_118631206_118631480_118631912_118632054_118632158_118632297_118634922_118635164_118635392_118635549_118638890_118639002_118639161_118639252_118643799_118643941_118644071_118644175_118645355_118645651_118645734_118645826_118647929_118648077_118650076_118650194_118650444_118650548_118655604_118655691_118656682
H1_mix_00015735	chr11	+	3337	5	FSM	ENSG00000019144.20	ENST00000612681.4	3337	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	63.7083197078686	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAGGACAGTGGGTGGG	194	False	NA	NA	False	NA	NA	NA	118632212	118643940	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_118635052_118635392_118635549_118638890_118639002_118639161_118639252_118643799
H1_mix_00015737	chr11	+	1928	1	FSM	ENSG00000278376.1	ENST00000610705.1	1884	1	-16	-28	-16	28	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGAAGGTGGTGGAGAAT	100	False	NA	33	True	AGTAAA	-42	NA	118791237	118793165	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_118791200_118793200
H1_mix_00015738	chr11	+	1309	11	FSM	ENSG00000186166.9	ENST00000526463.5	1295	11	-14	0	3	0	multi-exon	FALSE	canonical	1	2	junction_3	103.16297785543	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACCCCTATTATACCTTC	-17	True	NA	-77	True	NA	NA	NA	118998140	119015641	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_118998318_118998429_118998594_118999010_118999110_119001612_119001826_119010763_119010831_119011220_119011312_119011938_119012004_119012148_119012255_119014993_119015084_119015306_119015440_119015537
H1_mix_00015739	chr11	+	1119	11	FSM	ENSG00000186166.9	ENST00000532132.5	1119	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_9	88.3962103260089	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACCCCTATTATACCTTC	10	True	NA	-77	True	NA	NA	NA	118998167	119015641	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_118998318_118998429_118998594_118999010_118999110_119010763_119010831_119011220_119011312_119011938_119012004_119012148_119012255_119013231_119013263_119014993_119015084_119015287_119015440_119015537
H1_mix_00015741	chr11	+	1138	4	FSM	ENSG00000196655.12	ENST00000531290.5	1135	4	-3	0	0	0	multi-exon	FALSE	canonical	3	876	junction_1	85.6517496740272	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGTCTTAATCGATGGT	-9	True	NA	33	True	AATAAA	-25	NA	119018762	119023672	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_119019318_119020149_119020254_119021759_119021887_119023320
H1_mix_00015744	chr11	+	3388	16	FSM	ENSG00000160695.16	ENST00000614944.4	3388	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	29.0688072606283	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAGCTTAAGGATTTTTT	19	True	NA	13	True	AATAAA	-15	NA	119067820	119081967	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_119068203_119069172_119069345_119069441_119069578_119070233_119070398_119071595_119071844_119073197_119073400_119073799_119073952_119076896_119077084_119077500_119077648_119077877_119078067_119078172_119078335_119078564_119078705_119078794_119078998_119079128_119079301_119081091_119081315_119081458
H1_mix_00015747	chr11	+	1493	13	FSM	ENSG00000256269.11	ENST00000542729.5	1469	13	-24	0	-5	0	multi-exon	FALSE	canonical	3	16	junction_1	284.153714269818	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTGTGTGCGCGTGTGG	NA	False	NA	14	True	AATAAA	-14	NA	119084860	119093546	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_119085158_119088254_119088309_119088634_119088708_119089081_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092124_119092164_119092757_119092812_119092934_119093022_119093109
H1_mix_00015750	chr11	+	1965	14	NIC	ENSG00000256269.11	novel	1936	14	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	208.908575456845	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGTGCGCGTGTGGA	43	False	NA	15	True	AATAAA	-15	NA	119085245	119093547	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_119085894_119088254_119088309_119088634_119088708_119089081_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092124_119092164_119092403_119092524_119092757_119092812_119092934_119093022_119093109
H1_mix_00015751	chr11	+	1542	3	FSM	ENSG00000256269.11	ENST00000544182.1	1542	3	0	0	0	0	multi-exon	FALSE	canonical	3	760	junction_2	18	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGCACAGATGCCTGGG	11	False	NA	NA	False	NA	NA	NA	119091537	119093290	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_119092812_119092934_119093022_119093109
H1_mix_00015753	chr11	+	4726	14	FSM	ENSG00000172375.14	ENST00000336702.7	4771	14	0	45	0	-45	multi-exon	FALSE	canonical	1	2	junction_11	5.63694491094193	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGACAGCTTGGAATTTAA	0	True	NA	NA	False	NA	NA	NA	119107382	119118499	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_119108096_119110103_119110200_119110560_119110681_119110846_119110958_119111051_119111169_119111262_119111375_119111520_119111630_119112327_119112393_119112481_119112610_119112699_119112875_119113610_119113713_119113851_119113989_119114079_119114366_119116044
H1_mix_00015765	chr11	+	562	4	NIC	ENSG00000181264.9	novel	3930	4	NA	NA	5	-180	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	19.2006944318862	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTTGGTCAGTCTTCAA	13	True	NA	22	True	AATAAA	-17	NA	120325311	120330638	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_120325369_120327440_120327641_120329976_120330050_120330406
H1_mix_00015768	chr11	+	1524	2	FSM	ENSG00000109929.10	ENST00000527183.1	1524	2	0	0	0	0	multi-exon	FALSE	canonical	3	679	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCATTTGCCTTCATCCAC	2376	False	NA	NA	False	AATAAA	-22	NA	121305749	121307843	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_121306487_121307056
H1_mix_00015771	chr11	+	1689	12	FSM	ENSG00000023171.20	ENST00000534764.1	1689	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	7.79383099976466	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAGACACAGGTGAGCAGA	2	True	NA	NA	False	NA	NA	NA	123560276	123609902	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_123560653_123577366_123577578_123584311_123584333_123594081_123594167_123594734_123594839_123595941_123596038_123600467_123600549_123603425_123603542_123605321_123605479_123606608_123606799_123608658_123608803_123609794
H1_mix_00015772	chr11	+	3540	19	FSM	ENSG00000110002.16	ENST00000456829.7	4300	19	0	760	0	52	multi-exon	FALSE	canonical	3	54	junction_1	67.0373030483775	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCCACTTTGGGAAGCC	-3	True	NA	69	True	NA	NA	NA	124115449	124146961	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_124115483_124116565_124116681_124117496_124117555_124117672_124117876_124118188_124118412_124118532_124118709_124118974_124119090_124122959_124123130_124123365_124123455_124123659_124123805_124124236_124124317_124134919_124135035_124136128_124136294_124136573_124136675_124137014_124137269_124141597_124141742_124142441_124142573_124145236_124145364_124145865
H1_mix_00015777	chr11	+	2435	7	NIC	ENSG00000154134.15	novel	2272	9	NA	NA	-7	2	intron_retention	FALSE	canonical	3	8	junction_1	32.2460161191356	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGGCCCTGTCTGTCTGG	11	True	NA	16	True	AATAAA	-18	NA	124876867	124881468	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_124876933_124877518_124878437_124878583_124879342_124879464_124879576_124879786_124879949_124880417_124880609_124881238
H1_mix_00015785	chr11	+	2418	19	FSM	ENSG00000134910.14	ENST00000529196.5	2402	19	-16	0	1	0	multi-exon	FALSE	canonical	3	13	junction_1	391.758287156195	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATATGCAGTTTGTAAG	996	False	NA	23	True	NA	NA	NA	125592819	125620888	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_125592919_125593637_125593726_125595880_125596004_125597058_125597120_125602302_125602425_125602802_125602949_125604156_125604248_125605628_125605736_125606300_125606466_125608108_125608290_125609433_125609590_125611427_125611520_125612591_125612748_125612988_125613178_125614086_125614204_125614323_125614427_125618372_125618562_125620010_125620127_125620771
H1_mix_00015790	chr11	+	2829	14	NIC	ENSG00000149554.14	novel	1845	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	103	junction_13	82.2655535553925	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTTGATTCTTTCCTGG	0	True	NA	20	True	AATAAA	-16	NA	125625977	125676255	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_125626013_125626748_125626834_125627606_125627831_125629231_125629297_125629390_125629461_125633162_125633352_125635428_125635534_125637448_125637545_125643791_125643901_125644090_125644269_125644511_125644644_125653745_125653848_125655224_125656336_125675927
H1_mix_00015794	chr11	+	1435	2	NIC	ENSG00000198331.11	novel	1451	3	NA	NA	-34	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACTTGAACATTATTTCA	14	False	NA	14	True	ATTAAA	-17	NA	125887633	125900646	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_125887766_125899343
H1_mix_00015801	chr11	+	2189	5	FSM	ENSG00000150455.14	ENST00000392679.6	2189	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	2.87228132326901	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAAAAAATCAG	11	True	NA	NA	False	NA	NA	NA	126283092	126294933	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_126283154_126290461_126290586_126290802_126290962_126292476_126293056_126293667
H1_mix_00015802	chr11	+	2068	6	FSM	ENSG00000150455.14	ENST00000392680.6	2068	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	4.62168800331654	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTACTTTTGTGCCCCCC	5	True	NA	NA	False	AATGAA	-19	NA	126283117	126294684	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_126283154_126289664_126289818_126290461_126290586_126290802_126290962_126292476_126293056_126293667
H1_mix_00015813	chr11	+	1457	5	FSM	ENSG00000151498.12	ENST00000530533.5	1437	5	-20	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	174.355061584113	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTTAGAAATGGAGTTTAT	-14	True	NA	NA	False	AGTAAA	-2	NA	134253547	134260614	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_134253710_134256547_134256649_134258514_134258625_134259007_134259085_134259607
H1_mix_00015814	chr11	+	3315	10	FSM	ENSG00000151498.12	ENST00000531338.5	3315	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_8	171.809325836651	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAGGCTCCTTAAAT	1408	False	NA	34	True	AATAAA	-23	NA	134256582	134265850	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_134256649_134257087_134257258_134258514_134258625_134259007_134259085_134259607_134259746_134261043_134261180_134261274_134261373_134261737_134261891_134262131_134263556_134264907
H1_mix_00015822	chr11	+	3862	6	FSM	ENSG00000166105.16	ENST00000467068.1	3862	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	45.4990109782619	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGCCTCCCATACTCA	NA	False	NA	13	True	AATAAA	-16	NA	134309703	134319563	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_134312490_134312815_134312888_134313940_134314029_134314329_134314442_134318630_134318748_134318876
H1_mix_00015823	chr11	-	2916	3	FSM	ENSG00000177951.18	ENST00000325147.13	2916	3	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_2	7.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATATGGTCTCTGTCGTCC	-4	True	NA	-4	True	AATAAA	-35	NA	207382	202923	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_205668_205951_206044_207302
H1_mix_00015824	chr11	-	2358	7	NIC	ENSG00000142082.15	novel	1588	7	NA	NA	10	-406	combination_of_known_junctions	FALSE	canonical	3	42	junction_6	77.1400241984233	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACCCTAGTTAATGTTCC	564	False	NA	-10	True	AAAAAG	-15	NA	236316	215435	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_216719_218777_219042_224077_224240_230451_230553_232982_233216_233342_233535_236193
H1_mix_00015825	chr11	-	4293	6	NIC	ENSG00000142082.15	novel	1395	6	NA	NA	0	-4	intron_retention	FALSE	canonical	3	43	junction_1	66.0847940149623	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTTCTTTCCAGCATGA	5	True	NA	-57	True	GGGGCT	-18	NA	236339	216182	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_216719_218777_219042_224077_224240_230451_230553_232982_233216_233342
H1_mix_00015827	chr11	-	619	3	NNC	ENSG00000142089.17	novel	725	3	NA	NA	0	79574	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2572.5	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGTCTCATTTATCATTT	15	True	NA	NA	False	NA	NA	NA	320841	240101	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_240130_319676_319991_320564
H1_mix_00015828	chr11	-	618	3	NNC	ENSG00000142089.17	novel	725	3	NA	NA	0	79574	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2572.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGTCTCATTTATCATTT	15	True	NA	NA	False	NA	NA	NA	320841	240101	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_240129_319676_319991_320564
H1_mix_00015829	chr11	-	385	1	FSM	ENSG00000277290.1	ENST00000620253.1	385	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCATCCGGGCGCAGTGG	NA	False	NA	NA	False	AGTAAA	-21	NA	243483	243098	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_243100_243500
H1_mix_00015831	chr11	-	1316	8	NIC	ENSG00000185187.13	novel	1639	10	NA	NA	0	5	combination_of_known_splicesites	FALSE	canonical	3	27	junction_7	70.1258344197146	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCGGTCTCCTCCCTTGC	0	True	NA	-1	True	AATAAA	-22	NA	417397	405710	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_406060_406348_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_417293
H1_mix_00015832	chr11	-	1629	9	NIC	ENSG00000185187.13	novel	1598	10	NA	NA	-95	5	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	77.7374386959077	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCGGTCTCCTCCCTTGC	NA	False	NA	-1	True	AATAAA	-22	NA	417550	405710	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_406060_406348_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_409867_410028_417293
H1_mix_00015833	chr11	-	1841	10	NNC	ENSG00000185187.13	novel	1743	10	NA	NA	275	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	73.5421270051692	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTCGGTCTCCTCC	378	False	NA	-6	True	AATAAA	-17	NA	417050	405715	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_406060_406348_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_408694_408894_409867_410028_416775
H1_mix_00015834	chr11	-	1838	10	NIC	ENSG00000185187.13	novel	1639	10	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_9	64.9204641593594	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTCGGTCTCCTCC	8	True	NA	-6	True	AATAAA	-17	NA	417389	405715	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_406060_406141_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_408694_408894_409867_410028_417324
H1_mix_00015837	chr11	-	4308	20	NIC	ENSG00000185101.13	novel	2867	23	NA	NA	0	0	intron_retention	FALSE	canonical	2	7	junction_9	10.3682874690834	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTGCTTTCCTGGCCTC	0	True	NA	-18	True	AGTAAA	-13	NA	441957	417937	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_418590_418719_420616_420717_420861_420944_421043_421140_421199_428087_428200_428357_428395_428474_428640_428721_428827_429473_429653_429757_429819_430082_430180_430268_430404_431693_431768_431847_431907_431998_432055_433313_433460_433814_433938_434023_434099_441920
H1_mix_00015839	chr11	-	1954	11	FSM	ENSG00000023191.17	ENST00000354420.7	1952	11	0	-2	0	0	multi-exon	FALSE	canonical	3	39	junction_10	139.68120847129	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGCTCTTGTCCTTCCTG	-16	True	NA	-2	True	ATTAAA	-17	NA	507242	494512	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502250_504823_504997_507112
H1_mix_00015841	chr11	-	1755	10	NIC	ENSG00000023191.17	novel	1722	10	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_8	143.953010165826	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGAGGCTCTTGTCCTTCC	24	True	NA	-4	True	ATTAAA	-15	NA	507202	494514	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500739_502061_502182_507112
H1_mix_00015842	chr11	-	1703	10	NIC	ENSG00000023191.17	novel	1952	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_7	147.687190280131	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGAGGCTCTTGTCCTTCC	-16	True	NA	-4	True	ATTAAA	-15	NA	507242	494514	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_499924_500483_500655_502061_502250_507112
H1_mix_00015844	chr11	-	1234	4	FSM	ENSG00000185522.9	ENST00000469990.1	1232	4	0	-2	0	2	multi-exon	FALSE	canonical	3	16	junction_2	5.90668171555645	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGCTGGAAATGTTGGT	4303	False	NA	-10	True	AGTAAA	-18	NA	556420	554852	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_555112_555304_555931_555995_556116_556191
H1_mix_00015846	chr11	-	1882	10	NIC	ENSG00000185507.21	novel	1923	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_7	20.1592425881628	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTACTGGCATCTTGGCTGG	-2	True	NA	-5	True	AATAAA	-16	NA	615647	612554	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_612801_612998_613118_613205_613596_613784_613866_613950_614038_614173_614400_614475_614532_614796_615008_615096_615260_615344
H1_mix_00015849	chr11	-	1979	12	NIC	ENSG00000177030.19	novel	2190	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	90	junction_11	133.186875485736	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGCCCCACACGGCCGG	3120	False	NA	-15	True	AATAAA	-15	NA	694931	644232	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_644655_653961_654052_674535_674784_678693_678823_679687_679817_680962_681090_684897_684964_686857_686998_687910_688058_688330_688461_691500_691599_694678
H1_mix_00015858	chr11	-	1021	7	FSM	ENSG00000177542.11	ENST00000627843.2	1021	7	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_4	30.2843010302184	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCAGTGCATGGGATGGCG	9955	False	NA	NA	False	NA	NA	NA	795286	792304	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_792459_792552_792728_792869_792989_793528_793620_794457_794514_794775_794902_794986
H1_mix_00015862	chr11	-	3910	17	NIC	ENSG00000177595.19	novel	2984	16	NA	NA	-15	-1	combination_of_known_junctions	FALSE	canonical	3	9	junction_16	35.1634020502852	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTCAGAGCTTGATTTAT	3365	False	NA	-14	True	NA	NA	NA	809475	799185	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_799566_799814_800015_800130_800245_800332_800452_800542_800667_800761_800913_800984_801121_801217_801366_801444_801625_801964_802091_802194_802397_802542_802598_802681_802892_803173_803588_804093_804464_805178_806096_809411
H1_mix_00015863	chr11	-	2942	16	NIC	ENSG00000177595.19	novel	2984	16	NA	NA	-15	-1	combination_of_known_junctions	FALSE	canonical	3	21	junction_15	34.6198401690899	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTCAGAGCTTGATTTAT	3365	False	NA	-14	True	NA	NA	NA	809475	799185	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_799566_799814_800015_800130_800245_800383_800452_800542_800667_800761_800913_800984_801121_801217_801366_801444_801625_801964_802091_802194_802397_802542_802598_802681_802892_803173_803588_804093_804464_809411
H1_mix_00015864	chr11	-	3755	14	NIC	ENSG00000177595.19	novel	2984	16	NA	NA	11	-4	intron_retention	FALSE	canonical	3	41	junction_13	25.6540479752181	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACCTCAGAGCTTGATT	-10	True	NA	-17	True	NA	NA	NA	805219	799188	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_799566_799814_800015_800130_800245_800332_800452_800542_800667_800761_800913_800984_801121_801217_801366_801444_801625_801964_802091_802194_802397_802542_802598_802681_804464_805178
H1_mix_00015865	chr11	-	2526	3	FSM	ENSG00000177830.18	ENST00000524538.1	553	3	-149	-1824	-149	-96	multi-exon	FALSE	canonical	3	582	junction_2	13.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCGTCATCCCTGTGGCC	NA	False	NA	NA	False	NA	NA	NA	870900	867955	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_869957_870120_870164_870418
H1_mix_00015868	chr11	-	684	5	FSM	ENSG00000078902.16	ENST00000530541.1	684	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	145.052576674804	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGGACATGTTCCCCAAC	1	True	NA	NA	False	NA	NA	NA	1309623	1277154	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_1277254_1286001_1286093_1288623_1288777_1290226_1290410_1309465
H1_mix_00015869	chr11	-	469	3	FSM	ENSG00000078902.16	ENST00000527746.5	590	3	0	121	0	-121	multi-exon	FALSE	canonical	3	324	junction_2	9	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCAGCTATTATGGAGGC	3	True	NA	NA	False	NA	NA	NA	1309590	1290215	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_1290410_1295644_1295795_1309465
H1_mix_00015870	chr11	-	678	5	FSM	ENSG00000182208.15	ENST00000526462.5	795	5	117	0	117	0	multi-exon	FALSE	canonical	1	2	junction_4	43.5567159000768	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGTGGGGGCAGTGGGG	NA	False	NA	NA	False	NA	NA	NA	1501130	1470244	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_1470489_1471294_1471420_1480392_1480487_1480724_1480886_1501076
H1_mix_00015871	chr11	-	608	2	FSM	ENSG00000182208.15	ENST00000526698.1	608	2	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAATACGGTTCGTCTCC	5885	False	NA	NA	False	NA	NA	NA	1480885	1471304	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_1471420_1480392
H1_mix_00015872	chr11	-	361	2	FSM	ENSG00000182208.15	ENST00000529380.1	478	2	117	0	117	0	multi-exon	FALSE	canonical	1	2	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGCTCCTGCACCTGTTG	NA	False	NA	NA	False	NA	NA	NA	1501130	1480578	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_1480886_1501076
H1_mix_00015873	chr11	-	4455	6	FSM	ENSG00000184545.11	ENST00000331588.4	4455	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	4.4	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACGACTCCGCGCCTCTT	7115	False	NA	-8	True	AATAAA	-20	NA	1565936	1554050	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_1557575_1557793_1557918_1558111_1558272_1558888_1559056_1563850_1563990_1565595
H1_mix_00015874	chr11	-	352	1	FSM	ENSG00000205869.2	ENST00000382171.2	942	1	-293	883	-293	-883	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGCTCCAGCTGTGGG	NA	False	NA	NA	False	NA	NA	NA	1585576	1585224	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_1585200_1585600
H1_mix_00015876	chr11	-	3759	1	FSM	ENSG00000236264.5	ENST00000453533.1	435	1	-3126	-198	-3126	18	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTATTTCTAACACTTAT	NA	False	NA	NA	False	AATAAA	-35	NA	2338875	2335116	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_2335100_2338900
H1_mix_00015877	chr11	-	1931	3	FSM	ENSG00000129757.15	ENST00000414822.8	1936	3	0	5	0	0	multi-exon	FALSE	canonical	3	17	junction_1	65.5	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCAGTCTGTTTGTGCTTG	3	True	NA	-4	True	AATAAA	-21	NA	2885771	2883217	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_2883911_2883998_2884135_2884669
H1_mix_00015878	chr11	-	2665	15	NIC	ENSG00000205531.13	novel	2479	15	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	463.652364715335	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCCATGTGGGTCTTTG	4	True	NA	-1	True	ATTAAA	-23	NA	2992102	2944429	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_2945647_2951258_2951316_2951779_2951810_2954526_2954647_2955743_2955767_2958398_2958545_2959769_2959910_2964679_2964752_2969802_2969935_2971447_2971535_2972101_2972244_2976023_2976124_2978283_2978343_2979206_2979238_2991793
H1_mix_00015884	chr11	-	2800	23	FSM	ENSG00000110619.18	ENST00000531387.5	2805	23	0	5	0	2	multi-exon	FALSE	canonical	3	47	junction_20	187.845840830601	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTCTGTCTTGTTCTGC	190	False	NA	-7	True	AATAAA	-19	NA	3057437	3000926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3001249_3001969_3002054_3002540_3002601_3005365_3005434_3006878_3006960_3012194_3012277_3015780_3015850_3017105_3017296_3017856_3017955_3018407_3018512_3018619_3018750_3019138_3019268_3020219_3020333_3026675_3026798_3028995_3029085_3029302_3029444_3038049_3038200_3039193_3039293_3039834_3039932_3040895_3041032_3042164_3042257_3047752_3048002_3057342
H1_mix_00015886	chr11	-	2764	21	FSM	ENSG00000021762.20	ENST00000348039.9	2798	21	34	0	-8	0	multi-exon	FALSE	canonical	2	2	junction_16	8.08254291668161	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTTCCGCCCAGCGCTGG	33	False	NA	NA	False	NA	NA	NA	3165318	3088000	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3088344_3089845_3089949_3090557_3090697_3092431_3092559_3092866_3093053_3093526_3093664_3093745_3093836_3094236_3094335_3100157_3100257_3101602_3101700_3102182_3102282_3103238_3103321_3104192_3104378_3107262_3107456_3107770_3107946_3119546_3119632_3121996_3122099_3122347_3122429_3126472_3126556_3129012_3129170_3165215
H1_mix_00015887	chr11	-	891	7	FSM	ENSG00000005801.18	ENST00000528218.5	891	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	152.611707720389	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTTTCAAATGTCAAGAAT	13	True	NA	33	True	AATATA	-18	NA	3379138	3360282	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3360566_3361742_3361890_3362545_3362603_3370974_3371071_3371576_3371704_3373576_3373657_3379037
H1_mix_00015888	chr11	-	2021	5	FSM	ENSG00000005801.18	ENST00000005082.13	2021	5	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	172.672196661767	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATAAGTCTCCAGAGCA	35	True	NA	10	True	AATAAA	-40	NA	3379116	3358993	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3360566_3361742_3361890_3370974_3371071_3371576_3371704_3379037
H1_mix_00015890	chr11	-	3782	1	NIC	ENSG00000166492.9	novel	971	8	NA	NA	5976	-2387	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGCAACAGAGCAAGACCC	NA	False	NA	NA	False	NA	NA	NA	3416520	3412738	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_3412700_3416500
H1_mix_00015891	chr11	-	4706	1	NIC	ENSG00000166492.9	novel	971	8	NA	NA	1262	-6177	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCCTCCTCCCCCTCACA	NA	False	NA	NA	False	NA	NA	NA	3421234	3416528	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_3416500_3421200
H1_mix_00015892	chr11	-	1217	2	FSM	ENSG00000287906.1	ENST00000659225.1	1217	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTCTCCAATTAGCAG	-7	True	NA	NA	False	AAAAAG	-9	NA	3477065	3475279	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3476374_3476942
H1_mix_00015893	chr11	-	3097	3	NNC	ENSG00000255367.3	novel	578	3	NA	NA	53373	-23	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	1	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCATGTGCCTGGCAGTT	NA	False	NA	NA	False	NA	NA	NA	3518614	3508002	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_3508397_3515090_3515199_3516019
H1_mix_00015894	chr11	-	449	2	NIC	ENSG00000167311.14	novel	1232	4	NA	NA	22	2	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGAATTTTATGATTGGT	409	False	NA	-11	True	ATTAAA	-20	NA	3641970	3638509	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_3638794_3641805
H1_mix_00015896	chr11	-	5672	32	NNC	ENSG00000110713.17	novel	5628	32	NA	NA	0	-12	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_25	85.133744323133	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGCTTCCCTACTCCTA	3	True	NA	57	True	NA	NA	NA	3797541	3675810	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_3676377_3676508_3676621_3679553_3679709_3683199_3683442_3691346_3691490_3693231_3693376_3695448_3695607_3699081_3699349_3700609_3700840_3702462_3702893_3705199_3705357_3706444_3706628_3712563_3712729_3713817_3713996_3719411_3719551_3720711_3720826_3723156_3723456_3725102_3725220_3731390_3731579_3735190_3735325_3744508_3744650_3753315_3753409_3760538_3760627_3762901_3763040_3768580_3768745_3771774_3771929_3773631_3773740_3775881_3776022_3778872_3779050_3779155_3779258_3782041_3782146_3797399
H1_mix_00015900	chr11	-	509	1	FSM	ENSG00000230593.3	ENST00000448870.1	490	1	-9	-10	-9	10	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGACTTGTGTTTTATCTT	NA	False	NA	NA	False	NA	NA	NA	3892896	3892387	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3892400_3892900
H1_mix_00015902	chr11	-	479	2	Intergenic	novelGene_220	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCCTATCTCCCTTTGCT	NA	False	NA	-84	True	TATAAA	-8	NA	5165796	5160416	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_-_5160657_5165557
H1_mix_00015903	chr11	-	3144	8	FSM	ENSG00000132256.20	ENST00000684655.1	2862	8	55	-337	0	-40	multi-exon	FALSE	canonical	3	43	junction_7	18.3213937621502	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAAACGAGTTTTTTGAA	19	True	NA	-7	True	AATAAA	-24	NA	5685042	5663234	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_5665396_5665655_5665683_5665980_5666082_5667688_5667712_5678203_5678435_5679073_5679170_5679760_5680239_5685015
H1_mix_00015907	chr11	-	3408	12	NNC	ENSG00000051009.11	novel	3481	12	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	68.3626692388071	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTTTTCTTT	43	False	NA	-13	True	TATAAA	-14	NA	6234615	6211344	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_6211868_6214410_6214574_6214709_6214912_6217370_6218151_6218557_6218764_6218970_6219051_6222441_6222610_6222810_6222898_6223079_6223239_6223609_6224249_6224378_6224708_6234543
H1_mix_00015911	chr11	-	2666	15	FSM	ENSG00000166313.20	ENST00000609360.6	2666	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	131.893587286672	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCCTTCTTATGCCTG	-10	True	NA	-37	True	AATAAA	-16	NA	6419094	6395124	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6395702_6395785_6395963_6396099_6396216_6400988_6401073_6401344_6401430_6401573_6401689_6401976_6401983_6402081_6402210_6402575_6402726_6403144_6403209_6403318_6403405_6403487_6403545_6403646_6403823_6410626_6411362_6418984
H1_mix_00015916	chr11	-	595	4	FSM	ENSG00000110169.12	ENST00000527556.5	1126	4	531	0	490	0	multi-exon	FALSE	canonical	2	7	junction_3	2.94392028877595	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGCTACAGTGATGTGG	5440	False	NA	NA	False	NA	NA	NA	6437177	6431301	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6431471_6431640_6431804_6431886_6432018_6437045
H1_mix_00015917	chr11	-	415	4	FSM	ENSG00000110169.12	ENST00000533561.5	429	4	14	0	14	0	multi-exon	FALSE	canonical	1	1	junction_1	1.63299316185545	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTCTATCTGGTCCAGG	7	True	NA	NA	False	NA	NA	NA	6441052	6431905	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6432018_6440466_6440539_6440671_6440731_6440880
H1_mix_00015920	chr11	-	3048	13	FSM	ENSG00000110171.21	ENST00000359518.7	3042	13	-5	-1	-5	1	multi-exon	FALSE	canonical	2	5	junction_12	26.830745216801	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGTTTTTGCTGGGTTCT	7367	False	NA	-6	True	AATAAA	-12	NA	6473989	6448615	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6449181_6449305_6449447_6450550_6450622_6450891_6451061_6451270_6451439_6456071_6456176_6456296_6457030_6457295_6457477_6457695_6457848_6458064_6458297_6465564_6465733_6473083_6473249_6473790
H1_mix_00015924	chr11	-	1771	9	NIC	ENSG00000132254.13	novel	2543	8	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_4	108.672601767879	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCAGCGAGGTCAATTTG	21	True	NA	NA	False	AATAAA	-16	NA	6481305	6476518	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_6477269_6477717_6477893_6478040_6478199_6478578_6478653_6478737_6478960_6479139_6479259_6479971_6480069_6480322_6480424_6481230
H1_mix_00015925	chr11	-	1560	8	FSM	ENSG00000132254.13	ENST00000531037.5	1560	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	100.838929962185	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCTAGCACTAGGAATAAA	2	True	NA	NA	False	NA	NA	NA	6481324	6476553	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6477269_6477717_6477893_6478040_6478199_6478858_6478960_6479139_6479259_6479971_6480069_6480322_6480424_6481230
H1_mix_00015927	chr11	-	852	7	FSM	ENSG00000132254.13	ENST00000525235.1	852	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	113.789889220831	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAGACACGCTCATGACT	12	True	NA	NA	False	NA	NA	NA	6481314	6478083	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6478199_6478578_6478653_6478737_6478960_6479139_6479259_6479971_6480069_6480322_6480464_6481230
H1_mix_00015928	chr11	-	726	4	FSM	ENSG00000132275.11	ENST00000534343.1	726	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	39.8357739838062	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGATATCTGTCTCATGA	30	True	NA	-5	True	AATAAA	-19	NA	6603579	6599919	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6600266_6600485_6600583_6600668_6600776_6603403
H1_mix_00015929	chr11	-	1732	7	NIC	ENSG00000132275.11	novel	6559	7	NA	NA	4	-5	combination_of_known_junctions	FALSE	canonical	2	4	junction_6	29.3636207273937	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACATGGGGATATCTGTCT	16	True	NA	-10	True	AATAAA	-14	NA	6603593	6599924	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_6600266_6600485_6600583_6600668_6600776_6600925_6601056_6601148_6601603_6601851_6602265_6603403
H1_mix_00015930	chr11	-	1446	5	FSM	ENSG00000132275.11	ENST00000533907.1	1989	5	0	543	0	-543	multi-exon	FALSE	canonical	3	78	junction_1	2.73861278752583	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGGCCCCAAGACATCT	5	True	NA	NA	False	NA	NA	NA	6603604	6600485	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6600583_6600668_6600776_6600925_6601603_6601851_6602216_6603403
H1_mix_00015932	chr11	-	996	3	FSM	ENSG00000166340.18	ENST00000531754.2	996	3	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_2	16.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACCTCATTCATTTTCAT	NA	False	NA	NA	False	ATTAAA	-19	NA	6619448	6618056	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6618916_6619195_6619268_6619383
H1_mix_00015933	chr11	-	1002	2	FSM	ENSG00000158042.9	ENST00000529958.1	1002	2	0	0	0	0	multi-exon	FALSE	canonical	3	856	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCTTTATATGAATATAT	18	True	NA	-67	True	AATAGA	-4	NA	6683296	6681950	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6682403_6682746
H1_mix_00015934	chr11	-	484	3	FSM	ENSG00000149050.10	ENST00000525017.1	538	3	0	54	0	-54	multi-exon	FALSE	canonical	0	0	junction_2	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCCATGTTATGAATTGC	5	True	NA	NA	False	NA	NA	NA	7020342	7015873	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_7016025_7019682_7019746_7020072
H1_mix_00015936	chr11	-	726	4	FSM	ENSG00000166394.15	ENST00000528585.5	726	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	148.549281011013	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCCCATGAAGTGTGGC	7928	False	NA	-7	True	AATAAA	-16	NA	7669317	7665103	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_7665547_7667727_7667814_7668477_7668562_7669204
H1_mix_00015937	chr11	-	1249	9	FSM	ENSG00000166394.15	ENST00000299498.11	1249	9	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_8	103.418748300296	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCCCATGAAGTGTGGC	-17	True	NA	-7	True	AATAAA	-16	NA	7673500	7665103	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_7665547_7666450_7666551_7667727_7667814_7668477_7668562_7669204_7669335_7669624_7669732_7672450_7672524_7672747_7672892_7673418
H1_mix_00015938	chr11	-	1278	9	ISM	ENSG00000166394.15	ENST00000524790.5	1338	10	582	5	0	0	3prime_fragment	FALSE	canonical	3	14	junction_2	145.930152384625	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGCCCATGAAGTGTGG	4355	False	NA	-8	True	AATAAA	-15	NA	7672890	7665104	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_7665547_7665826_7665940_7666450_7666551_7667727_7667814_7668477_7668562_7669204_7669335_7669624_7669732_7672450_7672524_7672747
H1_mix_00015942	chr11	-	5788	6	FSM	ENSG00000166405.15	ENST00000309737.11	5788	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	19.4771661183038	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTCTAAAACGCCAGATA	-8	True	NA	44	True	AATAAA	-17	NA	8169025	8106055	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_8111138_8126658_8126808_8137377_8137472_8138271_8138348_8139966_8140194_8168865
H1_mix_00015946	chr11	-	4014	9	NIC	ENSG00000130413.16	novel	4677	10	NA	NA	587	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	27.9528062097529	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTAATTTTTATGTTAAC	8804	False	NA	-7	True	AATAAA	-19	NA	8467067	8391870	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_8392711_8413494_8413693_8435493_8435580_8436026_8436140_8452821_8452907_8454743_8454833_8457340_8457480_8461804_8461910_8464708
H1_mix_00015947	chr11	-	4497	10	FSM	ENSG00000130413.16	ENST00000486305.6	4677	10	180	0	180	0	multi-exon	FALSE	canonical	3	72	junction_8	10.4927958825138	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTAATTTTTATGTTAAC	8397	False	NA	-7	True	AATAAA	-19	NA	8467474	8391870	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_8392711_8413494_8413693_8435493_8435580_8436026_8436140_8440677_8440754_8452821_8452907_8454743_8454833_8457340_8457480_8461804_8461910_8464708
H1_mix_00015951	chr11	-	570	2	FSM	ENSG00000166436.17	ENST00000529211.1	970	2	400	0	400	0	multi-exon	FALSE	canonical	1	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATCTGAACTCCTCCTGG	2759	False	NA	NA	False	NA	NA	NA	8618884	8617568	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_8618004_8618749
H1_mix_00015952	chr11	-	2751	17	FSM	ENSG00000166444.19	ENST00000530991.5	3396	17	649	-4	-17	2	multi-exon	FALSE	canonical	1	1	junction_16	37.7952956728744	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTGTTCCTTGGCTTTG	7	False	NA	-14	True	AATAAA	-29	NA	8718494	8693348	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_8694131_8695462_8695550_8696426_8696667_8697524_8697637_8698932_8698975_8699212_8699391_8702571_8702721_8707084_8707226_8707776_8707855_8710844_8710915_8711121_8711232_8712550_8712736_8713997_8714043_8714609_8714707_8715602_8715819_8717740_8717893_8718427
H1_mix_00015954	chr11	-	769	5	FSM	ENSG00000166444.19	ENST00000532162.5	769	5	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_4	13.7908484148003	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAGAATATGGCAAATAT	3	True	NA	NA	False	NA	NA	NA	8699020	8693888	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_8694131_8695462_8695550_8696426_8696667_8697524_8697637_8698932
H1_mix_00015961	chr11	-	1702	5	FSM	ENSG00000175348.11	ENST00000525069.5	1433	5	-62	-207	-62	0	multi-exon	FALSE	canonical	3	11	junction_4	60.3676237730126	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGTGTATCTATCTATG	NA	False	NA	-13	True	AATAAA	-19	NA	8965073	8947293	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_8948476_8953202_8953338_8956189_8956299_8962091_8962184_8964889
H1_mix_00015962	chr11	-	3796	8	NNC	ENSG00000175352.11	novel	3761	7	NA	NA	-413	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_7	12.8142140466223	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTTGTCTGACAAAGTC	41	False	NA	-4	True	AATAAA	-19	NA	9004462	8980575	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_8983561_8983874_8983970_8984071_8984125_8985710_8985851_8987547_8987631_8988117_8988283_9003761_9003923_9004348
H1_mix_00015963	chr11	-	4826	22	NIC	ENSG00000184014.9	novel	4991	23	NA	NA	17	-2	combination_of_known_splicesites	FALSE	canonical	3	6	junction_6	72.8256078656247	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGCATGGATCACTGATT	4	True	NA	-10	True	AATAAA	-15	NA	9265333	9138826	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_9139855_9141939_9142109_9142721_9142846_9143402_9143486_9144096_9144279_9144994_9145114_9147029_9147152_9150080_9150210_9150679_9150765_9152357_9152443_9160712_9160866_9165835_9165968_9169855_9169950_9170626_9170778_9178131_9178367_9178857_9179074_9180766_9181085_9193493_9193682_9203659_9204318_9206672_9206783_9207560_9207633_9264960
H1_mix_00015966	chr11	-	6711	22	FSM	ENSG00000184014.9	ENST00000679446.1	6692	22	0	-19	0	0	multi-exon	FALSE	canonical	3	183	junction_3	51.1436995585492	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTGCATGGATCACTG	425	False	NA	-13	True	AATAAA	-12	NA	9264990	9138829	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_9142109_9142721_9142846_9143402_9143486_9144096_9144279_9144994_9145114_9145669_9145816_9147029_9147152_9150080_9150210_9150679_9150765_9152357_9152443_9160712_9160866_9165835_9165968_9169855_9169950_9170626_9170778_9178131_9178367_9178857_9179074_9180766_9181085_9193493_9193682_9203659_9204318_9206672_9206783_9207560_9207633_9264960
H1_mix_00015968	chr11	-	2735	4	ISM	ENSG00000166471.11	ENST00000299596.8	1443	8	24880	1	-1614	-1	intron_retention	FALSE	canonical	3	101	junction_1	135.774322560146	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCACATTTGGGATTTAT	NA	False	NA	-6	True	AATAAA	-20	NA	9289687	9280654	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_9281042_9283370_9283594_9286454_9286594_9287701
H1_mix_00015969	chr11	-	7381	41	FSM	ENSG00000133812.18	ENST00000675281.2	7347	41	0	-34	0	0	multi-exon	FALSE	canonical	0	0	junction_12	34.9928474834501	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTAAATTTATTTCTTA	-9	True	NA	-36	True	NA	NA	NA	10294219	9778811	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_9780517_9781506_9781639_9784350_9784439_9785124_9785319_9787633_9787739_9789108_9789343_9790555_9790684_9795830_9795958_9807999_9808186_9808900_9809003_9812531_9812709_9816839_9817025_9819228_9819304_9829355_9829497_9832223_9832421_9839497_9839697_9842624_9842771_9845564_9845741_9846955_9847084_9850022_9850219_9852675_9852750_9853539_9853713_9856457_9856721_9858225_9858397_9895942_9896012_9961956_9962107_9963772_9963883_9968340_9968546_9989496_9989596_9992414_9992544_9992989_9993104_9993920_9993999_9998265_9998380_10000913_10001023_10002556_10002690_10028451_10028558_10029764_10029876_10031047_10031171_10042843_10042982_10193901_10193988_10294014
H1_mix_00015970	chr11	-	507	3	ISM	ENSG00000133812.18	ENST00000532095.2	1866	9	28149	-13	-1231	13	3prime_fragment	FALSE	canonical	3	107	junction_1	4.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGATTTGCTTTAATTT	NA	False	NA	NA	False	TATAAA	-5	NA	9789204	9785012	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_9785319_9787633_9787739_9789108
H1_mix_00015971	chr11	-	993	7	ISM	ENSG00000133812.18	ENST00000689128.1	7279	41	454525	30068	3448	-912	internal_fragment	FALSE	canonical	3	21	junction_4	28.3514647867717	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACTGCACAAGTAAACTAT	NA	False	NA	NA	False	NA	NA	NA	9839603	9808911	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_9809003_9812531_9812709_9816839_9817025_9828125_9828222_9829355_9829497_9832223_9832421_9839497
H1_mix_00015972	chr11	-	1187	9	ISM	ENSG00000133812.18	ENST00000692716.1	9215	39	301118	76931	-3508	-43	internal_fragment	FALSE	canonical	2	9	junction_8	20.0546129356814	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAGTGTAGCTGAGAGCT	7874	False	NA	NA	False	NA	NA	NA	9993103	9853706	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_9853713_9856457_9856721_9858225_9858397_9895942_9896012_9961956_9962107_9963772_9963883_9968340_9968546_9989496_9989596_9992989
H1_mix_00015976	chr11	-	5280	15	NNC	ENSG00000072952.20	novel	5815	19	NA	NA	6244	2553	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5.35333197787192	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAGAGCTCTGCTTGAGC	NA	False	NA	NA	False	NA	NA	NA	10627740	10570537	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_10570563_10573090_10576576_10580454_10580590_10581866_10581987_10591547_10591613_10593491_10593600_10594145_10594196_10600917_10601060_10603119_10603252_10604404_10604546_10606741_10606773_10609727_10609852_10623777_10623857_10625965_10626584_10627715
H1_mix_00015983	chr11	-	3718	2	ISM	ENSG00000236287.8	ENST00000533925.5	533	3	46	2809	26	0	5prime_fragment	FALSE	canonical	3	134	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGTTATTATTGGTAT	7	True	NA	-1	True	TTTAAA	-3	NA	10858027	10852705	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_10856258_10857861
H1_mix_00015985	chr11	-	1738	4	NNC	ENSG00000050165.19	novel	678	4	NA	NA	12	814	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	89.4663189262989	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCAGTAGTTCTCAACTGG	6	True	NA	-4	True	AATAAA	-18	NA	12009318	12000860	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_12001773_12002299_12002438_12008369_12008609_12008869
H1_mix_00015986	chr11	-	1441	4	NNC	ENSG00000050165.19	novel	1087	3	NA	NA	0	807	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	84.194219912454	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACACAGTGCAGTAGTTCT	-6	True	NA	-11	True	AATAAA	-11	NA	12009330	12000867	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_12001773_12002299_12002438_12008369_12008609_12009171
H1_mix_00015987	chr11	-	996	6	FSM	ENSG00000148925.11	ENST00000525864.5	1325	6	0	329	0	-108	multi-exon	FALSE	canonical	3	135	junction_5	25.1920622419047	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTACTCTGGCATGTTTTC	54	True	NA	NA	False	NA	NA	NA	13463180	13405656	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_13405857_13413529_13413651_13417157_13417261_13419459_13419746_13421641_13421839_13463091
H1_mix_00015993	chr11	-	693	3	FSM	ENSG00000129084.18	ENST00000527632.1	693	3	0	0	0	0	multi-exon	FALSE	canonical	3	1417	junction_1	52	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTCCATTTTGTCTTA	6430	False	NA	NA	False	NA	NA	NA	14514002	14507586	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_14507767_14510871_14510952_14513569
H1_mix_00015997	chr11	-	2622	5	NIC	ENSG00000186104.11	novel	1882	5	NA	NA	3	0	intron_retention	FALSE	canonical	3	17	junction_4	17.6847391838274	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACACAGATGTGTCTTAA	6	True	NA	NA	False	AATAAA	-24	NA	14891659	14878008	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_14878298_14879113_14879444_14880135_14880769_14885775_14885918_14890431
H1_mix_00015998	chr11	-	2695	4	ISM	ENSG00000166689.16	ENST00000531066.6	5530	27	227649	-157	3092	157	3prime_fragment	FALSE	canonical	3	48	junction_1	3.09120616516523	553	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGAGGCCTGGATTGAGG	8545	False	NA	NA	False	NA	NA	NA	16786765	16777139	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_16779021_16782753_16782897_16783699_16783834_16786228
H1_mix_00015999	chr11	-	4732	22	NNC	ENSG00000166689.16	novel	4980	23	NA	NA	979	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	30.7538689194504	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATTGGCGTGGTTCTTCC	2370	False	NA	NA	False	AATAAA	-19	NA	17012363	16787659	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_16789297_16789774_16789879_16790797_16790916_16791010_16791203_16794487_16794715_16794909_16795019_16800973_16801076_16801667_16801818_16802971_16803053_16803226_16803296_16813112_16813167_16816177_16816265_16816799_16817323_16826119_16826591_16841546_16841723_16851190_16851288_16852282_16852356_16854888_16854994_16855618_16855712_16855802_16855915_16871098_16871183_17012295
H1_mix_00016002	chr11	-	454	2	Genic_Genomic	ENSG00000244398.1	novel	321	1	NA	NA	-35	17003	multi-exon	FALSE	non_canonical	0	0	junction_1	0	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTGAGGTAAAATTCATG	NA	False	NA	NA	False	AAAAAG	-8	NA	16975048	16957689	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr11_-_16957722_16974626
H1_mix_00016003	chr11	-	8459	34	NNC	ENSG00000011405.14	novel	8428	33	NA	NA	0	4376	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	71.0235801968987	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATACAATGGACTTTTATT	-19	True	NA	NA	False	AAAAAG	-2	NA	17207986	17082195	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_17082224_17086571_17089921_17091333_17091460_17091546_17091657_17091995_17092069_17092158_17092277_17094260_17094386_17097056_17097265_17099859_17099970_17101277_17101435_17102661_17102832_17105168_17105306_17110431_17110562_17112573_17112667_17114360_17114466_17117490_17117672_17118644_17118740_17119219_17119314_17119785_17119975_17122187_17122334_17122701_17122814_17129299_17129468_17131915_17132039_17134818_17135030_17135110_17135160_17136481_17136626_17145667_17145732_17145862_17145943_17147516_17147629_17148666_17148788_17150497_17150656_17155525_17155630_17168676_17169807_17207847
H1_mix_00016004	chr11	-	8460	34	NNC	ENSG00000011405.14	novel	8428	33	NA	NA	0	4376	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	71.0235801968987	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATACAATGGACTTTTATT	-19	True	NA	NA	False	AAAAAG	-2	NA	17207986	17082195	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_17082225_17086571_17089921_17091333_17091460_17091546_17091657_17091995_17092069_17092158_17092277_17094260_17094386_17097056_17097265_17099859_17099970_17101277_17101435_17102661_17102832_17105168_17105306_17110431_17110562_17112573_17112667_17114360_17114466_17117490_17117672_17118644_17118740_17119219_17119314_17119785_17119975_17122187_17122334_17122701_17122814_17129299_17129468_17131915_17132039_17134818_17135030_17135110_17135160_17136481_17136626_17145667_17145732_17145862_17145943_17147516_17147629_17148666_17148788_17150497_17150656_17155525_17155630_17168676_17169807_17207847
H1_mix_00016005	chr11	-	8458	34	NNC	ENSG00000011405.14	novel	8428	33	NA	NA	0	4376	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	71.0235801968987	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATACAATGGACTTTTATT	-19	True	NA	NA	False	AAAAAG	-2	NA	17207986	17082195	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_17082226_17086574_17089921_17091333_17091460_17091546_17091657_17091995_17092069_17092158_17092277_17094260_17094386_17097056_17097265_17099859_17099970_17101277_17101435_17102661_17102832_17105168_17105306_17110431_17110562_17112573_17112667_17114360_17114466_17117490_17117672_17118644_17118740_17119219_17119314_17119785_17119975_17122187_17122334_17122701_17122814_17129299_17129468_17131915_17132039_17134818_17135030_17135110_17135160_17136481_17136626_17145667_17145732_17145862_17145943_17147516_17147629_17148666_17148788_17150497_17150656_17155525_17155630_17168676_17169807_17207847
H1_mix_00016006	chr11	-	8460	34	NNC	ENSG00000011405.14	novel	8428	33	NA	NA	0	4376	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	71.0235801968987	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATACAATGGACTTTTATT	-19	True	NA	NA	False	AAAAAG	-2	NA	17207986	17082195	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_17082227_17086573_17089921_17091333_17091460_17091546_17091657_17091995_17092069_17092158_17092277_17094260_17094386_17097056_17097265_17099859_17099970_17101277_17101435_17102661_17102832_17105168_17105306_17110431_17110562_17112573_17112667_17114360_17114466_17117490_17117672_17118644_17118740_17119219_17119314_17119785_17119975_17122187_17122334_17122701_17122814_17129299_17129468_17131915_17132039_17134818_17135030_17135110_17135160_17136481_17136626_17145667_17145732_17145862_17145943_17147516_17147629_17148666_17148788_17150497_17150656_17155525_17155630_17168676_17169807_17207847
H1_mix_00016007	chr11	-	8241	32	FSM	ENSG00000011405.14	ENST00000265970.11	8227	32	0	-14	0	14	multi-exon	FALSE	canonical	3	259	junction_22	43.7293254256823	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCCTTGTTGACATACTA	19	False	NA	-18	True	AATAAA	-19	NA	17169741	17086557	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_17089921_17091333_17091460_17091546_17091657_17091995_17092069_17092158_17092277_17094260_17094386_17097056_17097265_17099859_17099970_17101277_17101435_17102661_17102832_17105168_17105306_17110431_17110562_17112573_17112667_17114360_17114466_17117490_17117672_17118644_17118740_17119219_17119314_17119785_17119975_17122187_17122334_17122701_17122814_17129299_17129468_17131915_17132039_17134818_17135030_17135110_17135160_17136481_17136626_17145667_17145732_17145862_17145943_17147516_17147629_17148666_17148788_17150497_17150656_17155525_17155630_17168676
H1_mix_00016008	chr11	-	2304	7	FSM	ENSG00000006071.16	ENST00000682091.1	2682	7	3	375	-1	-372	multi-exon	FALSE	canonical	1	2	junction_3	2.14087209644419	2765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTAGATGGGCTGAGGGG	0	True	NA	NA	False	NA	NA	NA	17476842	17448515	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_17448672_17453118_17453284_17460487_17461826_17463437_17463605_17470100_17470223_17474885_17475028_17476628
H1_mix_00016009	chr11	-	738	1	FSM	ENSG00000006611.17	ENST00000624811.1	1194	1	424	32	424	-32	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGCTCATTAATAAAATAG	NA	False	NA	-36	True	NA	NA	NA	17494669	17493931	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_17493900_17494700
H1_mix_00016010	chr11	-	1322	11	FSM	ENSG00000129158.11	ENST00000527494.5	1314	11	0	-8	0	8	multi-exon	FALSE	canonical	3	11	junction_6	63.8357266740185	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGAATTGTTTTGTTGGGC	23	True	NA	0	True	AATAAA	-28	NA	18012898	17788039	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_17788414_17878207_17878245_17988596_17988756_17992930_17992994_17995795_17995910_17999493_17999573_18000496_18000558_18004440_18004536_18006590_18006747_18007940_18008077_18012850
H1_mix_00016011	chr11	-	1493	12	NIC	ENSG00000129158.11	novel	1525	12	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	35	junction_10	48.0624593627917	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCCAGAGAATTGTTTTG	3	True	NA	-6	True	AATAAA	-22	NA	18012918	17788045	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_17788414_17878207_17878245_17959469_17959637_17988596_17988756_17992930_17992994_17995795_17995910_18000496_18000558_18004440_18004536_18006590_18006747_18007940_18008077_18010070_18010140_18012850
H1_mix_00016019	chr11	-	1289	11	NIC	ENSG00000166788.10	novel	1573	12	NA	NA	14	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	167.926888853453	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTGACAGTTGAAATTGA	13	True	NA	-16	True	AATAAA	-12	NA	18106055	18080351	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_18080492_18081410_18081504_18086865_18087055_18087142_18087226_18089329_18089511_18090174_18090291_18090433_18090494_18092244_18092325_18096770_18096855_18103232_18103347_18105906
H1_mix_00016020	chr11	-	804	7	FSM	ENSG00000166788.10	ENST00000533851.5	804	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	189.188618403257	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAGCTGCCAAACAAGTA	-3	True	NA	NA	False	NA	NA	NA	18106071	18089351	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_18089511_18090174_18090317_18090433_18090494_18092244_18092325_18096770_18096855_18103232_18103347_18105906
H1_mix_00016021	chr11	-	628	3	FSM	ENSG00000166788.10	ENST00000528002.1	660	3	32	0	32	0	multi-exon	FALSE	canonical	3	12	junction_2	215	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGGGGGAGGTTGTGGAC	NA	False	NA	NA	False	NA	NA	NA	18090904	18089495	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_18089511_18090174_18090317_18090433
H1_mix_00016023	chr11	-	2166	11	FSM	ENSG00000110756.18	ENST00000531848.1	2160	11	0	-6	0	6	multi-exon	FALSE	canonical	3	16	junction_10	25.7062249270483	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTCTTTTTTTCCTGA	2	True	NA	NA	False	ATTAAA	-22	NA	18322198	18296155	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_18296985_18297558_18297718_18298791_18298971_18300827_18300917_18305421_18305494_18306134_18306348_18308945_18309080_18310740_18310934_18311386_18311452_18311913_18312025_18322076
H1_mix_00016024	chr11	-	314	3	FSM	ENSG00000110756.18	ENST00000399287.7	711	3	0	397	0	42	multi-exon	FALSE	canonical	0	0	junction_2	25	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGATTAAGGGCAGCTCT	22	True	NA	NA	False	NA	NA	NA	18322178	18311913	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_18312025_18317750_18317908_18322132
H1_mix_00016025	chr11	-	441	3	FSM	ENSG00000074319.13	ENST00000580814.1	441	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	364	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATCATCAGCTTGTTATT	9368	False	NA	NA	False	TATAAA	-23	NA	18481731	18469030	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_18469219_18480484_18480636_18481629
H1_mix_00016027	chr11	-	581	6	FSM	ENSG00000074319.13	ENST00000438874.6	581	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	280.317676931013	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATCCTGCCACAACAAGT	17	True	NA	NA	False	NA	NA	NA	18526899	18502542	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_18502578_18506856_18506924_18509541_18509666_18514677_18514842_18516098_18516165_18526774
H1_mix_00016029	chr11	-	1799	10	FSM	ENSG00000151116.17	ENST00000320750.10	1799	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	21.9634938415634	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTTTACATGCACTTTA	-7	True	NA	-82	True	NA	NA	NA	18588686	18531778	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_18532488_18536405_18536470_18544622_18544797_18546879_18547051_18558227_18558331_18564891_18565011_18566346_18566483_18570213_18570378_18578723_18578809_18588612
H1_mix_00016031	chr11	-	374	3	FSM	ENSG00000151116.17	ENST00000539569.1	565	3	191	0	191	0	multi-exon	FALSE	canonical	3	37	junction_2	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCACACTGAAAGAAGATACA	NA	False	NA	NA	False	NA	NA	NA	18536573	18532405	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_18532488_18534329_18534454_18536405
H1_mix_00016033	chr11	-	1011	1	FSM	ENSG00000256282.2	ENST00000540985.1	943	1	-11	-57	-11	57	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCTGATTATCTCAGGAT	3112	False	NA	NA	False	TTTAAA	-39	NA	18596582	18595571	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_18595600_18596600
H1_mix_00016034	chr11	-	2696	6	NIC	ENSG00000179119.15	novel	5601	6	NA	NA	-10	-2872	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	35.4096032172065	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATGCTGAGCATTCTTA	17	False	NA	-4	True	AATAAA	-16	NA	18634801	18609274	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_18609955_18611476_18611555_18612313_18612489_18614562_18616099_18616874_18616990_18634689
H1_mix_00016037	chr11	-	471	4	FSM	ENSG00000254560.6	ENST00000526061.5	471	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.89897948556636	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGATTGGAGGGTGCCCAA	0	True	NA	NA	False	NA	NA	NA	27218735	27047185	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_27047313_27151049_27151153_27217316_27217481_27218658
H1_mix_00016038	chr11	-	2186	7	NNC	ENSG00000109881.17	novel	1452	6	NA	NA	0	36577	intron_retention	FALSE	canonical	3	5	junction_1	119.229004674012	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCAGCGGCAAGTCATTC	7	True	NA	NA	False	NA	NA	NA	27363215	27294249	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_27294570_27338097_27339036_27340695_27340838_27341391_27341551_27350331_27350440_27357402_27357542_27362835
H1_mix_00016039	chr11	-	5267	19	NNC	ENSG00000205213.14	novel	5250	18	NA	NA	0	9957	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	115.370538315079	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAACAAAAGCTTCATGATC	-4	True	NA	NA	False	NA	NA	NA	27472775	27356003	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_27356038_27365962_27369144_27371614_27371699_27372282_27372399_27373550_27373677_27373974_27374047_27376298_27376371_27377157_27377224_27378696_27378769_27380270_27380340_27380639_27380712_27380894_27380967_27382187_27382257_27384335_27384408_27385252_27385469_27391093_27391166_27392446_27392519_27412788_27412861_27472117
H1_mix_00016040	chr11	-	5163	17	FSM	ENSG00000205213.14	ENST00000389858.4	5163	17	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_16	117.85736877684	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATTTTGCCTTAATTTAA	-4	True	NA	-18	True	ATTAAA	-16	NA	27472775	27365960	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_27369144_27371614_27371699_27372282_27372399_27373550_27373677_27373974_27374047_27376298_27376371_27377157_27377224_27378696_27378769_27380270_27380340_27380639_27380712_27380894_27380967_27382187_27382257_27384335_27384408_27385252_27385469_27391093_27391166_27392446_27392519_27472117
H1_mix_00016041	chr11	-	4259	3	NIC	ENSG00000254934.5	novel	786	3	NA	NA	0	3318	combination_of_known_splicesites	FALSE	canonical	3	260	junction_1	673.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCTTAAAATAGCCAATGA	1203	False	NA	34	True	AATAAA	-18	NA	27634522	27614307	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_27618179_27623949_27624146_27634330
H1_mix_00016042	chr11	-	798	4	FSM	ENSG00000254934.5	ENST00000534757.1	798	4	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	751.425903791511	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGAGGATTCAGGAGAAGA	1098	False	NA	NA	False	NA	NA	NA	27634627	27617992	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_27618179_27620756_27620876_27623949_27624146_27634330
H1_mix_00016043	chr11	-	3856	2	FSM	ENSG00000176697.20	ENST00000530861.5	3918	2	78	-16	78	16	multi-exon	FALSE	canonical	1	2	junction_1	0	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTCTCTTTACTGTAAA	804	False	NA	-74	True	CATAAA	-18	NA	27700822	27654876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_27658586_27700675
H1_mix_00016045	chr11	-	861	7	NNC	ENSG00000148950.11	novel	1905	9	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	120.182384547635	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTTTAGTTGTTTTTAA	6	True	NA	-42	True	AATAAA	-12	NA	31509605	31432403	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_31432569_31433459_31433571_31448943_31449092_31456259_31456387_31460625_31460715_31463171_31463306_31509518
H1_mix_00016048	chr11	-	1557	11	FSM	ENSG00000007372.25	ENST00000640684.1	1557	11	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_6	2.71293199325011	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAATGAGTAATAAAA	4	True	NA	NA	False	NA	NA	NA	31810991	31793246	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_31793554_31793651_31793803_31794031_31794115_31794629_31794789_31800690_31800857_31801560_31801777_31801870_31801913_31802703_31802835_31806401_31806463_31806848_31806926_31810827
H1_mix_00016049	chr11	-	3662	2	FSM	ENSG00000085063.17	ENST00000528987.1	3716	2	54	0	54	0	multi-exon	FALSE	canonical	3	499	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCGAGTGCAATGAATGA	3394	False	NA	-76	True	NA	NA	NA	33719557	33708869	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_33710344_33717369
H1_mix_00016053	chr11	-	1554	2	FSM	ENSG00000135363.12	ENST00000464025.5	1550	2	0	-4	0	4	multi-exon	FALSE	canonical	3	14	junction_1	0	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGTTTATTTGATTACG	5403	False	NA	NA	False	AATAAA	-20	NA	33865151	33858571	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_33859576_33864601
H1_mix_00016056	chr11	-	429	3	FSM	ENSG00000110442.12	ENST00000526789.1	609	3	0	180	0	-180	multi-exon	FALSE	canonical	3	353	junction_1	32	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGGAAGCCCGGATAAGCA	-7	True	NA	NA	False	NA	NA	NA	36289428	36278380	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_36278617_36280711_36280838_36289361
H1_mix_00016059	chr11	-	3264	8	NNC	ENSG00000175274.19	novel	3381	8	NA	NA	0	-14780	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	136.352185047937	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTTCCTCAAGTTGTAT	1	True	NA	NA	False	NA	NA	NA	44950778	44900682	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_44900712_44932351_44935018_44935560_44935663_44936802_44936900_44937303_44937353_44937554_44937614_44938206_44938367_44950676
H1_mix_00016061	chr11	-	1221	11	NIC	ENSG00000121680.16	novel	1668	11	NA	NA	-2	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	68.8650854933035	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCAGCGTGCGGCCTCTCC	6	True	NA	-7	True	AATAAA	-17	NA	45917831	45910175	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_45910313_45910897_45910963_45913818_45913939_45914130_45914204_45914315_45914469_45914603_45914685_45915467_45915569_45915702_45915837_45916226_45916304_45917457_45917494_45917587
H1_mix_00016064	chr11	-	4087	18	NIC	ENSG00000135365.17	novel	7451	19	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_17	18.4088514891285	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAATGCCGTGTAGTTAT	-5	True	NA	-6	True	ATTAAA	-17	NA	46121449	45932565	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_45934226_45935635_45935740_45936493_45936570_45938156_45938313_45945839_45946004_45948885_45948947_45949401_45949482_45950205_45950258_45953526_45953626_45965314_45965609_45969814_45969905_45971115_45971368_45979759_45979967_46076753_46076820_46079133_46079167_46084165_46084303_46092182_46092224_46120934
H1_mix_00016065	chr11	-	5161	3	NIC	ENSG00000135365.17	novel	3603	19	NA	NA	259	-36	intron_retention	FALSE	canonical	3	26	junction_1	42.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGGTCTTCCTAGTGTTA	NA	False	NA	-11	True	AATAAA	-6	NA	45939497	45932687	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_45934226_45935120_45935740_45936493
H1_mix_00016066	chr11	-	2730	18	FSM	ENSG00000135365.17	ENST00000418153.6	2730	18	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_11	24.5655679361924	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGGAATTGAGATTTCA	-26	True	NA	NA	False	TATAAA	-6	NA	46121010	45933480	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_45934226_45935635_45935740_45936493_45936570_45938156_45938313_45945839_45946004_45948885_45948947_45949401_45949482_45950205_45950258_45953526_45953626_45965314_45965609_45969814_45969902_45971115_45971368_45979759_45979967_46076753_46076820_46079133_46079167_46084165_46084303_46092182_46092224_46120934
H1_mix_00016071	chr11	-	4819	18	FSM	ENSG00000110497.15	ENST00000533727.5	4817	18	0	-2	0	2	multi-exon	TRUE	canonical	3	35	junction_10	18.8765796561658	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTCCTCTCTCTTATTT	328	False	NA	-4	True	ATTAAA	-20	NA	46593948	46396411	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_46397944_46408512_46408707_46410275_46410369_46417912_46418053_46433473_46433629_46434848_46435038_46443487_46443599_46493607_46493709_46494123_46494205_46508190_46508371_46541944_46542982_46543251_46543399_46543974_46544042_46545603_46545777_46547112_46547297_46547816_46547876_46548245_46548501_46593827
H1_mix_00016073	chr11	-	3468	14	NNC	ENSG00000175220.12	novel	3395	13	NA	NA	-48	57707	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	134.634196487762	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGAAATCTACCTTCCAA	-1	True	NA	NA	False	NA	NA	NA	46700667	46619372	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_46619398_46677079_46679226_46679364_46679469_46679647_46679777_46680204_46680283_46680486_46680564_46680639_46680748_46681010_46681110_46681292_46681380_46682050_46682183_46688172_46688261_46695659_46695756_46695974_46696157_46700550
H1_mix_00016074	chr11	-	6703	45	NNC	ENSG00000175216.15	novel	7172	44	NA	NA	0	77250	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	172.585233164983	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAATAAATTTTTTTGA	-12	True	NA	NA	False	NA	NA	NA	46846280	46665797	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_46665823_46743541_46744266_46744425_46744578_46750273_46750434_46750527_46750612_46751117_46751256_46751345_46751535_46752634_46752711_46753309_46753498_46754887_46755068_46758922_46759044_46759268_46759443_46760611_46760785_46761999_46762194_46762626_46762763_46762975_46763180_46763480_46763631_46765130_46765257_46767574_46767664_46769962_46770099_46770787_46770983_46776254_46776384_46777438_46777553_46778138_46778314_46778459_46778600_46780193_46780320_46780427_46780486_46783273_46783369_46784487_46784674_46788680_46788774_46790075_46790187_46790469_46790584_46795593_46795777_46796811_46796941_46797804_46797970_46798082_46798173_46801199_46801305_46808030_46808145_46809399_46809501_46809741_46809875_46811006_46811179_46816197_46816405_46818309_46818504_46821174_46821269_46846219
H1_mix_00016084	chr11	-	785	10	FSM	ENSG00000149182.15	ENST00000525314.5	785	10	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	199.194488991148	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGCTTCAGTGAGATTGA	-8	True	NA	NA	False	AAGAAA	-28	NA	47176882	47171758	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47171801_47172280_47172334_47172709_47172752_47173425_47173483_47173758_47173841_47175014_47175099_47175181_47175314_47175850_47175924_47176515_47176635_47176781
H1_mix_00016089	chr11	-	1830	11	NIC	ENSG00000165912.16	novel	1873	11	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	2	42	junction_10	137.207288436147	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGGGCTCATGTGCATT	590	False	NA	-5	True	ATTAAA	-38	NA	47186395	47177521	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_47178047_47178365_47178488_47178893_47179031_47179158_47179280_47179410_47179587_47180185_47180342_47180454_47180691_47182402_47182560_47182673_47182765_47183003_47183066_47186348
H1_mix_00016094	chr11	-	727	2	FSM	ENSG00000134575.13	ENST00000671941.1	727	2	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGCCTGCGCTCCCTA	3461	False	NA	NA	False	NA	NA	NA	47245378	47243238	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47243322_47244734
H1_mix_00016095	chr11	-	640	4	FSM	ENSG00000134575.13	ENST00000672166.1	640	4	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	11.8977121983832	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCGGCAGACACCAGAGTA	-9	True	NA	NA	False	NA	NA	NA	47248816	47245518	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47245835_47247640_47247728_47248037_47248134_47248675
H1_mix_00016096	chr11	-	496	3	FSM	ENSG00000134575.13	ENST00000673562.1	570	3	0	74	0	-74	multi-exon	FALSE	canonical	3	132	junction_2	11.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGCTTGGCTGGGATGA	-7	True	NA	NA	False	NA	NA	NA	47248814	47247466	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47247728_47248037_47248134_47248675
H1_mix_00016097	chr11	-	1379	13	NNC	ENSG00000165916.9	novel	1373	12	NA	NA	0	51020	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	630.643894937723	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAACCATCATCTATTTCC	-2	True	NA	NA	False	NA	NA	NA	47426251	47367748	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_47367778_47418776_47418946_47419115_47419198_47420263_47420410_47420630_47420728_47422573_47422723_47422829_47422974_47424045_47424184_47424428_47424492_47424606_47424712_47425120_47425247_47425866_47425951_47426204
H1_mix_00016098	chr11	-	935	10	FSM	ENSG00000165916.9	ENST00000524447.6	935	10	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_4	695.704918290315	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGAGTTCCCGATGCCCA	223	False	NA	NA	False	NA	NA	NA	47426225	47420338	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47420410_47420630_47420728_47422573_47422723_47422829_47422974_47424108_47424184_47424428_47424492_47424606_47424712_47425120_47425247_47425866_47425951_47426204
H1_mix_00016103	chr11	-	4591	14	NIC	ENSG00000149187.19	novel	4583	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	199	junction_1	111.152435444868	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGTCTTCAGAGTTACT	43	False	NA	-4	True	ATTAAA	-15	NA	47553117	47465936	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_47468892_47472190_47472358_47473087_47473232_47475335_47475522_47476845_47476957_47477296_47477426_47478876_47478953_47482694_47482857_47483452_47483533_47484388_47484524_47486749_47486799_47487158_47487242_47488836_47489025_47552991
H1_mix_00016104	chr11	-	7773	14	NIC	ENSG00000149187.19	novel	3650	16	NA	NA	1	-12	combination_of_known_junctions	FALSE	canonical	3	176	junction_1	119.224118921233	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAACTGTTTGAGAAGAAC	44	False	NA	-23	True	NA	NA	NA	47553116	47465955	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_47472103_47472190_47472358_47473087_47473232_47475335_47475522_47476845_47476960_47477296_47477426_47478876_47478941_47482694_47482857_47483452_47483533_47484388_47484524_47486749_47486799_47487158_47487242_47488836_47489025_47552991
H1_mix_00016107	chr11	-	930	11	FSM	ENSG00000109919.10	ENST00000530428.1	930	11	0	0	0	0	multi-exon	TRUE	canonical	3	154	junction_8	344.301553873926	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAAGAGGTATTTCTTT	70	False	NA	NA	False	AATATA	-31	NA	47642607	47622710	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47622777_47625673_47625742_47627079_47627128_47628952_47629047_47630554_47630615_47631035_47631088_47631653_47631712_47634671_47634735_47638698_47638806_47638966_47639052_47642378
H1_mix_00016108	chr11	-	2971	12	NIC	ENSG00000109920.13	novel	4035	17	NA	NA	0	-13	combination_of_known_junctions	FALSE	canonical	3	43	junction_7	58.5122717933018	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCTCGTCAACTCCTGT	NA	False	NA	-22	True	AATAAA	-30	NA	47746199	47716506	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_47717513_47719928_47720087_47722975_47723317_47724027_47724173_47724467_47724779_47731373_47731562_47732116_47732220_47732536_47732671_47734024_47734130_47736615_47736741_47743952_47744164_47746055
H1_mix_00016109	chr11	-	4012	17	FSM	ENSG00000109920.13	ENST00000263773.10	4035	17	0	23	0	-23	multi-exon	FALSE	canonical	0	0	junction_16	52.3837999767104	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTATCCTTTTGCTCGT	-10	True	NA	-32	True	AATAAA	-20	NA	47767341	47716516	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47717513_47719928_47720087_47722975_47723317_47724027_47724173_47724467_47724779_47731373_47731562_47732536_47732671_47734024_47734130_47736615_47736741_47743952_47744164_47746055_47746395_47750915_47751037_47751142_47751291_47752915_47753103_47754527_47754665_47765269_47765363_47767068
H1_mix_00016110	chr11	-	3118	6	NIC	ENSG00000109920.13	novel	4035	17	NA	NA	0	-24	combination_of_known_junctions	FALSE	canonical	3	30	junction_5	73.1491626746335	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTTATCCTTTTGCTCG	NA	False	NA	-33	True	AATAAA	-19	NA	47726904	47716517	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_47717513_47719928_47720087_47722975_47723317_47724027_47724173_47724467_47724779_47725736
H1_mix_00016117	chr11	-	2856	18	NNC	ENSG00000149136.9	novel	2831	17	NA	NA	0	79535	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	236.426027408122	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTAAAAGAAACAAAAGAAGT	-17	True	NA	NA	False	NA	NA	NA	57335892	57246450	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_57246478_57325989_57326479_57326702_57326890_57327425_57327515_57327711_57327883_57328296_57328427_57330092_57330139_57330290_57330430_57330854_57330928_57331667_57331890_57332151_57332281_57332382_57332487_57332624_57332856_57332958_57333150_57333434_57333541_57334462_57334649_57335067_57335241_57335729
H1_mix_00016118	chr11	-	636	2	FSM	ENSG00000149115.14	ENST00000532273.5	592	2	0	-44	0	40	multi-exon	FALSE	canonical	3	502	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTCCAAGGCTGTGGTT	NA	False	NA	-13	True	NA	NA	NA	57300679	57299597	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_57300082_57300527
H1_mix_00016119	chr11	-	681	4	FSM	ENSG00000254979.5	ENST00000529411.1	681	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	75.8961278473561	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGCCTATGGCTGAG	7670	False	NA	NA	False	NA	NA	NA	57410113	57389009	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_57389318_57389886_57389957_57409174_57409299_57409934
H1_mix_00016128	chr11	-	1979	4	ISM	ENSG00000149150.9	ENST00000528450.5	2358	15	24563	-2	4198	0	3prime_fragment	FALSE	canonical	3	141	junction_1	2.49443825784929	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTGGTGTGCGCCTGTC	NA	False	NA	-5	True	AATAAA	-16	NA	57490322	57484533	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_57485243_57487094_57487219_57488915_57488990_57489250
H1_mix_00016132	chr11	-	1455	4	FSM	ENSG00000156603.20	ENST00000337672.9	1529	4	0	74	0	0	multi-exon	FALSE	canonical	3	9	junction_1	240.796363944493	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGTGCAATTTGTCTG	0	True	NA	-79	True	NA	NA	NA	57712215	57703787	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_57704636_57704718_57704816_57704972_57705230_57711962
H1_mix_00016134	chr11	-	471	3	Genic_Genomic	ENSG00000288788.1	novel	798	1	NA	NA	45	5312	multi-exon	FALSE	canonical	2	9	junction_2	1.5	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTATATTACCCCAAGTT	-11	True	NA	NA	False	AATATA	-5	NA	59102329	59096264	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr11_-_59096498_59096837_59096911_59102164
H1_mix_00016135	chr11	-	2659	3	FSM	ENSG00000245571.7	ENST00000532845.2	2659	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	12	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATTGATTTTGCCAATAA	NA	False	NA	-60	True	ATTAAA	-22	NA	59142801	59134020	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_59136282_59139956_59140168_59142614
H1_mix_00016137	chr11	-	2064	4	FSM	ENSG00000245571.7	ENST00000531708.1	880	4	0	-1184	0	0	multi-exon	FALSE	canonical	1	3	junction_1	9.17726659862414	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTAAAATATGTAACTCCC	NA	False	NA	NA	False	NA	NA	NA	59143015	59134105	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_59135589_59136056_59136282_59139956_59140168_59142870
H1_mix_00016140	chr11	-	922	3	FSM	ENSG00000166902.5	ENST00000525470.1	922	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTCTCAGAACCTCCTG	5907	False	NA	NA	False	NA	NA	NA	59810022	59807235	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_59807850_59808732_59808873_59809854
H1_mix_00016141	chr11	-	506	5	FSM	ENSG00000167987.11	ENST00000538036.1	506	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	71.894019222742	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCGTGGAAAAGCTCCAGGA	6474	False	NA	NA	False	NA	NA	NA	61161136	61132443	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61132540_61133254_61133338_61134035_61134208_61138736_61138836_61161080
H1_mix_00016143	chr11	-	2083	1	FSM	ENSG00000279549.1	ENST00000624057.1	2085	1	-61	63	-61	-63	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCCACTGCACTCCAGC	6521	False	NA	NA	False	NA	NA	NA	61145525	61143442	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61143400_61145500
H1_mix_00016144	chr11	-	4928	24	FSM	ENSG00000167986.15	ENST00000535283.6	4920	24	0	-8	0	0	multi-exon	FALSE	canonical	1	4	junction_15	425.970858184787	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGTACATTTGTTTTTG	1040	False	NA	NA	False	AATAAA	-15	NA	61332761	61299454	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61300220_61300808_61300933_61302256_61302360_61302581_61302752_61303045_61303156_61303864_61304036_61308982_61309078_61309795_61309961_61310294_61310419_61311783_61311896_61311988_61312085_61313498_61313707_61313861_61313970_61314046_61314211_61314307_61314487_61321594_61321698_61322295_61322413_61323010_61323095_61323978_61324138_61325610_61325709_61326778_61326894_61329362_61329585_61329957_61330075_61331542
H1_mix_00016146	chr11	-	3981	26	FSM	ENSG00000167986.15	ENST00000680075.1	3981	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	403.943354444655	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGTACATTTGTTTTTG	47	True	NA	NA	False	AATAAA	-15	NA	61333067	61299454	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61300220_61300808_61300933_61302256_61302360_61302581_61302752_61303045_61303156_61303864_61304036_61308982_61309078_61309795_61309961_61310294_61310419_61311783_61311896_61311988_61312085_61313498_61313707_61313861_61313970_61314046_61314211_61314307_61314487_61316284_61316394_61316491_61316568_61321594_61321698_61322295_61322413_61323010_61323095_61323978_61324138_61325610_61325709_61326778_61326894_61329957_61330075_61331542_61331692_61332907
H1_mix_00016149	chr11	-	4434	28	FSM	ENSG00000167986.15	ENST00000680367.1	4426	28	0	-8	0	4	multi-exon	FALSE	canonical	0	0	junction_27	396.274783078237	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTTTTTGCTTTTATT	-6	True	NA	NA	False	AATAAA	-23	NA	61333807	61299446	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61300220_61300808_61300933_61302256_61302360_61302581_61302752_61303045_61303156_61303864_61304036_61308982_61309078_61309795_61309961_61310294_61310419_61311783_61311896_61311988_61312085_61313498_61313707_61313861_61313970_61314046_61314211_61314307_61314487_61316284_61316394_61316491_61316568_61321594_61321698_61322295_61322413_61323010_61323095_61323978_61324138_61325610_61325709_61326778_61326894_61329362_61329585_61329957_61330075_61331542_61331692_61332907_61333009_61333525
H1_mix_00016159	chr11	-	1715	6	NIC	ENSG00000162144.10	novel	1803	7	NA	NA	3	0	combination_of_known_junctions	TRUE	canonical	2	14	junction_5	54.2903306307854	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAACAAGTGTTTATTTC	9	True	NA	50	True	AATATA	-17	NA	61361837	61348753	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_61349644_61350990_61351148_61352984_61353140_61353783_61353993_61356529_61356729_61361732
H1_mix_00016160	chr11	-	3205	8	FSM	ENSG00000162144.10	ENST00000426130.6	3205	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	63.5783302834594	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAACAAGTGTTTATTTC	-6	True	NA	50	True	AATATA	-17	NA	61362283	61348753	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61350423_61350990_61351148_61352984_61353140_61353783_61353993_61356529_61356729_61357202_61357372_61357732_61357829_61361732
H1_mix_00016161	chr11	-	3231	9	NNC	ENSG00000162144.10	novel	3205	8	NA	NA	1	0	intron_retention	FALSE	canonical	1	1	junction_6	66.1305526969191	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCTTTGTTCAGGCTGC	16	True	NA	-1	True	ATTAAA	-17	NA	61362261	61348804	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_61350423_61350990_61351148_61352984_61353140_61353783_61353993_61356529_61356729_61357202_61357372_61357732_61357829_61361243_61361343_61361732
H1_mix_00016162	chr11	-	6889	6	ISM	ENSG00000162144.10	ENST00000294072.9	2584	7	-401	0	0	0	intron_retention	FALSE	canonical	3	63	junction_1	38.9204316522826	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCTTTGTTCAGGCTGC	-6	True	NA	-1	True	ATTAAA	-17	NA	61362283	61348804	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_61350423_61350990_61351148_61352984_61353140_61353783_61353993_61356529_61356729_61357732
H1_mix_00016164	chr11	-	3224	10	NIC	ENSG00000149532.16	novel	3487	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_5	136.776198203714	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTATACTGCATTGTAT	1	True	NA	-19	True	AATAAA	-18	NA	61429290	61402728	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_61404705_61410937_61411106_61411768_61411938_61415665_61415785_61416104_61416163_61416363_61416520_61419948_61420095_61420469_61420574_61421389_61421609_61429181
H1_mix_00016169	chr11	-	565	5	NIC	ENSG00000149532.16	novel	722	6	NA	NA	-3	-4	combination_of_known_junctions	FALSE	canonical	3	61	junction_2	141.753968198425	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCACACCCTCTGAGAAC	10	True	NA	NA	False	NA	NA	NA	61429953	61416468	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_61416520_61419948_61420095_61421389_61421609_61429181_61429291_61429913
H1_mix_00016175	chr11	-	1206	1	FSM	ENSG00000279632.1	ENST00000623917.1	878	1	273	-601	273	601	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGGTCCCTGTACTCAA	2961	False	NA	NA	False	NA	NA	NA	61427052	61425846	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61425800_61427100
H1_mix_00016177	chr11	-	2246	6	FSM	ENSG00000149485.19	ENST00000536991.5	2701	6	455	0	455	0	multi-exon	FALSE	canonical	3	947	junction_4	76.3937170191371	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAGGCTGAGGCAGGAGA	9067	False	NA	NA	False	NA	NA	NA	61806073	61802006	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61802463_61802800_61802927_61803031_61803112_61803362_61803460_61803669_61803768_61804684
H1_mix_00016180	chr11	-	569	4	FSM	ENSG00000149485.19	ENST00000544309.5	581	4	12	0	12	0	multi-exon	FALSE	canonical	1	1	junction_3	517.221422603511	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGCTACATCATTTTGT	NA	False	NA	NA	False	NA	NA	NA	61817185	61811009	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61811076_61812470_61812669_61813242_61813354_61816991
H1_mix_00016181	chr11	-	2377	10	FSM	ENSG00000221968.9	ENST00000529404.5	2379	10	0	2	0	-2	multi-exon	FALSE	canonical	1	1	junction_2	144.465639470617	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTATGGAGTGGAGTGGT	NA	False	NA	-14	True	ATTAAA	-13	NA	61880702	61873528	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61873866_61875850_61875977_61876104_61876191_61876358_61876964_61877510_61877588_61878154_61878216_61878511_61878635_61878745_61878848_61879311_61879510_61880040
H1_mix_00016182	chr11	-	5319	8	FSM	ENSG00000221968.9	ENST00000533676.5	5314	8	0	-5	0	0	multi-exon	FALSE	canonical	3	430	junction_7	19.3812448790377	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAGTGGTGAATTTGCAT	9072	False	NA	-4	True	ATTAAA	-23	NA	61882526	61873518	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61873866_61875850_61875977_61876110_61876191_61876358_61878216_61878511_61878635_61878745_61878848_61879311_61879510_61880040
H1_mix_00016186	chr11	-	912	4	FSM	ENSG00000167996.16	ENST00000532829.5	912	4	0	0	0	0	multi-exon	FALSE	canonical	2	216	junction_2	9221.732821017	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTTGTCTTTGAGGTCT	4	True	NA	-46	True	AATAAA	-15	NA	61967631	61964565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61964892_61964986_61965106_61965368_61965516_61967311
H1_mix_00016188	chr11	-	1954	13	FSM	ENSG00000255508.7	ENST00000526409.5	1954	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	4959.19971422361	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCTTTCCTGTCCTGCCT	NA	False	NA	-11	True	ATTAAA	-16	NA	62577321	62559602	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62559838_62560068_62560194_62560281_62560455_62566805_62567011_62567398_62567529_62570964_62571109_62571539_62571683_62571837_62571902_62572583_62572743_62574676_62574909_62576656_62576750_62576906_62577018_62577181
H1_mix_00016190	chr11	-	3846	25	NNC	ENSG00000089597.18	novel	3906	25	NA	NA	0	44227	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	328.380527488055	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACATGGATACCTGGCAG	7	True	NA	NA	False	AAAAAG	-3	NA	62646602	62580598	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_62580625_62624832_62625925_62626064_62626166_62626334_62626448_62626570_62626685_62626859_62626935_62627047_62627125_62627288_62627354_62628768_62629013_62629193_62629296_62629587_62629685_62629813_62629958_62630196_62630277_62630378_62630506_62630600_62630837_62631029_62631184_62632564_62632746_62633004_62633102_62633183_62633268_62633440_62633515_62634820_62635001_62638982_62639111_62639358_62639468_62639626_62639732_62646561
H1_mix_00016194	chr11	-	1772	8	FSM	ENSG00000149499.12	ENST00000460939.5	1770	8	0	-2	0	0	multi-exon	FALSE	canonical	3	114	junction_6	13.6785248040981	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCGGTGCTTTTGTGGGG	6548	False	NA	-2	True	AATAAA	-17	NA	62606212	62602217	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62602679_62602758_62603248_62603728_62603817_62603943_62604202_62605112_62605181_62605641_62605774_62605854_62605981_62606062
H1_mix_00016195	chr11	-	2926	21	ISM	ENSG00000149499.12	ENST00000394773.7	3266	22	1179	0	0	0	3prime_fragment	FALSE	canonical	3	72	junction_20	23.6606741239551	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCGGTGCTTTTGTGGGG	6280	False	NA	-2	True	AATAAA	-17	NA	62611596	62602217	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_62602679_62602758_62602890_62603148_62603248_62603728_62603817_62603943_62604042_62604112_62604202_62605112_62605181_62605641_62605774_62605854_62605981_62606062_62606215_62606957_62607100_62607665_62607822_62608200_62608297_62608541_62608653_62608735_62608806_62608961_62609133_62609353_62609478_62609628_62609697_62610878_62610993_62611086_62611345_62611424
H1_mix_00016196	chr11	-	2911	22	FSM	ENSG00000149499.12	ENST00000529309.5	2909	22	0	-2	0	0	multi-exon	FALSE	canonical	3	18	junction_2	30.1834151273979	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCGGTGCTTTTGTGGGG	6	True	NA	-2	True	AATAAA	-17	NA	62612530	62602217	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62602679_62602758_62602780_62603148_62603248_62603728_62603817_62603943_62604042_62604112_62604202_62605112_62605181_62605641_62605774_62605854_62605981_62606062_62606215_62606957_62607100_62607665_62607822_62608200_62608297_62608541_62608653_62608735_62608806_62608961_62609133_62609353_62609478_62609628_62609697_62610878_62610993_62611086_62611345_62611424_62611597_62612435
H1_mix_00016197	chr11	-	3024	22	FSM	ENSG00000149499.12	ENST00000278845.8	3017	22	-6	-1	0	0	multi-exon	FALSE	canonical	3	38	junction_20	27.0553308925471	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCGGTGCTTTTGTGGGG	6	True	NA	-2	True	AATAAA	-17	NA	62612530	62602217	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62602679_62602758_62602890_62603148_62603248_62603728_62603817_62603943_62604042_62604112_62604202_62605112_62605181_62605641_62605774_62605854_62605981_62606062_62606215_62606957_62607100_62607665_62607822_62608200_62608297_62608541_62608653_62608735_62608806_62608961_62609133_62609353_62609478_62609628_62609697_62610878_62610993_62611086_62611348_62611424_62611597_62612435
H1_mix_00016200	chr11	-	1563	5	NNC	ENSG00000149541.10	novel	1452	5	NA	NA	39	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_4	94.0648047890389	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGCCTCTTGTTTTCCTTT	18	True	NA	-27	True	AATAAA	-16	NA	62622107	62615295	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_62615800_62616505_62616797_62616986_62617348_62620496_62620672_62621875
H1_mix_00016202	chr11	-	670	5	NNC	ENSG00000278615.5	novel	646	4	NA	NA	0	43118	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1051.84421375031	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTAGGCGTGATGGTGC	-7	True	NA	NA	False	AAAAAG	-1	NA	62665210	62619698	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_62619725_62662818_62663160_62663235_62663334_62664848_62664974_62665130
H1_mix_00016203	chr11	-	4765	25	NIC	ENSG00000089597.18	novel	3906	25	NA	NA	-1368	3	combination_of_known_junctions	FALSE	canonical	3	23	junction_24	398.679591485025	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTAGTCTGGATTCTAGT	5788	False	NA	83	True	AATAAA	-22	NA	62640839	62624822	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_62625925_62626064_62626166_62626334_62626448_62626570_62626685_62626859_62626935_62627047_62627125_62627288_62627354_62628768_62629013_62629193_62629296_62629587_62629685_62629813_62629958_62630196_62630277_62630378_62630506_62630600_62630837_62631029_62631184_62632564_62632746_62633004_62633102_62633183_62633268_62633440_62633515_62634309_62634376_62634820_62635001_62638982_62639111_62639358_62639468_62639626_62639732_62639929
H1_mix_00016204	chr11	-	3830	24	NIC	ENSG00000089597.18	novel	3835	24	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	32	junction_18	260.488126931367	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTAGTCTGGATTCTAGT	7	True	NA	83	True	AATAAA	-22	NA	62646602	62624822	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_62625925_62626064_62626166_62626334_62626448_62626570_62626685_62626859_62626935_62627047_62627125_62627288_62627354_62628768_62629013_62629193_62629296_62629587_62629685_62629813_62629958_62630196_62630277_62630378_62630506_62630600_62630837_62631029_62631184_62632564_62632746_62633004_62633102_62633183_62633268_62633440_62633515_62634820_62635001_62638982_62639111_62639358_62639468_62639626_62639732_62646561
H1_mix_00016215	chr11	-	2073	5	FSM	ENSG00000162191.14	ENST00000532904.5	2073	5	0	0	0	0	multi-exon	FALSE	canonical	3	914	junction_2	104.755369790765	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGACTCCTTCCTGAAT	19	True	NA	-1	True	AATAAA	-21	NA	62679058	62676497	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62677833_62677926_62678119_62678338_62678409_62678494_62678602_62678689
H1_mix_00016217	chr11	-	1914	6	FSM	ENSG00000162191.14	ENST00000533476.5	1912	6	0	-2	0	0	multi-exon	FALSE	canonical	3	914	junction_3	93.9957445845289	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTGACTCCTTCCTGAA	4	True	NA	-2	True	AATAAA	-20	NA	62679073	62676498	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62676640_62676812_62677833_62677926_62678119_62678338_62678409_62678494_62678602_62678689
H1_mix_00016219	chr11	-	763	8	FSM	ENSG00000162191.14	ENST00000524762.5	763	8	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_2	351.490586862666	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCAGACGTTCCGGGCCC	-3	True	NA	NA	False	NA	NA	NA	62679080	62676979	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62677006_62677517_62677564_62677780_62677833_62677926_62678119_62678338_62678409_62678494_62678602_62678689_62678744_62678864
H1_mix_00016223	chr11	-	861	4	FSM	ENSG00000162191.14	ENST00000528907.5	861	4	0	0	0	0	multi-exon	FALSE	canonical	3	934	junction_1	104.33599570618	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGAAATGATGGATAGCAG	4	True	NA	9	True	NA	NA	NA	62679073	62677917	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62678409_62678494_62678602_62678689_62678744_62678864
H1_mix_00016224	chr11	-	2066	10	FSM	ENSG00000168000.16	ENST00000449636.6	2381	10	0	315	0	-315	multi-exon	FALSE	canonical	2	4	junction_9	134.767655569333	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGGAGGGGAGCTAGGTG	-4	True	NA	NA	False	NA	NA	NA	62707426	62689603	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62707108
H1_mix_00016225	chr11	-	2733	10	FSM	ENSG00000168000.16	ENST00000684115.1	3048	10	0	315	0	-315	multi-exon	FALSE	canonical	3	171	junction_9	84.8829259104039	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGGAGGGGAGCTAGGTG	-1	True	NA	NA	False	NA	NA	NA	62707587	62689603	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62707108
H1_mix_00016226	chr11	-	2792	11	FSM	ENSG00000168000.16	ENST00000683892.1	3107	11	0	315	0	-315	multi-exon	FALSE	canonical	3	17	junction_10	138.727250387226	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGGAGGGGAGCTAGGTG	5	True	NA	NA	False	NA	NA	NA	62709519	62689603	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62707108_62707325_62709146
H1_mix_00016227	chr11	-	1882	11	FSM	ENSG00000168000.16	ENST00000683296.1	1882	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	140.411680425811	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTGACTCTGAAATGGG	-1	True	NA	-37	True	AATAAA	-19	NA	62707587	62690274	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62690522_62690611_62690732_62690816_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62707108
H1_mix_00016228	chr11	-	1984	12	FSM	ENSG00000168000.16	ENST00000405837.5	1984	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	166.095959519174	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTGACTCTGAAATGGG	10	True	NA	-37	True	AATAAA	-19	NA	62709514	62690274	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62690522_62690611_62690693_62690786_62690874_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62707108_62707325_62709146
H1_mix_00016229	chr11	-	1464	11	FSM	ENSG00000168000.16	ENST00000421906.5	1440	11	0	-24	0	0	multi-exon	FALSE	canonical	2	24	junction_10	123.091226332343	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTGTCAGCTTCTTCC	8787	False	NA	-53	True	AATAAA	-3	NA	62706344	62690290	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62706258
H1_mix_00016231	chr11	-	1835	7	FSM	ENSG00000168000.16	ENST00000683368.1	1835	7	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_6	32.9882133833013	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCCTCGTTTTTCCTTC	NA	False	NA	-81	True	AAGAAA	-44	NA	62695388	62690318	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62690522_62690611_62690693_62690786_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567
H1_mix_00016232	chr11	-	1252	8	NIC	ENSG00000168000.16	novel	2724	10	NA	NA	13	0	combination_of_known_splicesites	FALSE	canonical	2	14	junction_4	163.008075422849	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCAGCACTTTCCCACCT	7720	False	NA	-107	True	AAGAAA	-18	NA	62707411	62690344	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62694567_62694712_62702467_62702550_62705300_62705618_62707108
H1_mix_00016236	chr11	-	3354	23	Fusion	ENSG00000162231.14_ENSG00000168569.8	novel	2290	21	NA	NA	0	39639	multi-exon	TRUE	non_canonical	0	0	junction_1	73.1821710889289	47	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGACCAGGCGCGGTGG	-2	True	NA	NA	False	NA	NA	NA	62805440	62731989	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr11_-_62732015_62790327_62790916_62791678_62792515_62792640_62792702_62794257_62794441_62794934_62795008_62795900_62795944_62796065_62796182_62796286_62796346_62796459_62796568_62797182_62797239_62797317_62797387_62798538_62798576_62800376_62800487_62801093_62801202_62801328_62801418_62801561_62801632_62801738_62801820_62801941_62802047_62802176_62802261_62803418_62803573_62803791_62803979_62805328
H1_mix_00016237	chr11	-	864	1	NIC	ENSG00000185670.9	novel	490	2	NA	NA	2911	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAATGGCTCCTAATTTT	8912	False	NA	-10	True	AATAAA	-15	NA	62749188	62748324	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_62748300_62749200
H1_mix_00016238	chr11	-	1834	12	NNC	ENSG00000162236.13	novel	1794	11	NA	NA	-40	47027	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	59.6597792168086	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACATGCAAATCACGAGAT	9718	False	NA	NA	False	AAAAAG	-1	NA	62832091	62759832	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_62759870_62806896_62807629_62824165_62824288_62824458_62824566_62825035_62825118_62825282_62825340_62825422_62825540_62827154_62827226_62827342_62827399_62827560_62827632_62831018_62831263_62831953
H1_mix_00016239	chr11	-	441	3	FSM	ENSG00000168569.8	ENST00000528367.1	857	3	0	416	0	-416	multi-exon	FALSE	canonical	3	9	junction_1	1.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCACTGAGTAAGTAGG	10	True	NA	NA	False	NA	NA	NA	62791992	62772076	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62772133_62774594_62774666_62791678
H1_mix_00016240	chr11	-	852	1	FSM	ENSG00000269176.2	ENST00000601484.2	763	1	-94	5	-94	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCACTGCCCTGTGTGCTA	5123	False	NA	NA	False	AATAAA	-39	NA	62786879	62786027	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62786000_62786900
H1_mix_00016245	chr11	-	296	1	FSM	ENSG00000269463.1	ENST00000596971.1	382	1	35	51	35	-51	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGATCATATTGTGACCATC	NA	False	NA	NA	False	AATATA	-10	NA	62808028	62807732	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62807700_62808000
H1_mix_00016246	chr11	-	1153	10	FSM	ENSG00000133316.16	ENST00000311713.11	1153	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	162.955420700885	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGACCCTGAGCCTTTTG	5	True	NA	-6	True	AATAAA	-15	NA	62839581	62832910	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62833132_62833791_62833938_62834275_62834332_62834426_62834528_62835430_62835533_62835694_62835842_62835960_62836037_62839113_62839236_62839321_62839429_62839506
H1_mix_00016247	chr11	-	988	8	FSM	ENSG00000133316.16	ENST00000542347.5	988	8	0	0	0	0	multi-exon	FALSE	canonical	3	508	junction_4	25.2699708858445	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCACGGGGTCTGGAGCAT	4	True	NA	NA	False	NA	NA	NA	62839582	62833814	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62833938_62834275_62834332_62834426_62834528_62835430_62835533_62835694_62835842_62835960_62836037_62839113_62839236_62839321
H1_mix_00016249	chr11	-	1359	9	ISM	ENSG00000255717.8	ENST00000686500.1	1073	10	102	10	2	0	3prime_fragment	TRUE	canonical	3	37	junction_7	57.0854622474059	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCCTGTTTACTTTTTTT	96	False	NA	-25	True	AATAAA	-14	NA	62855784	62851989	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62855132_62855217_62855423
H1_mix_00016250	chr11	-	3779	2	FSM	ENSG00000255717.8	ENST00000656268.1	3771	2	1	-9	1	0	multi-exon	FALSE	canonical	3	219	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCCTGTTTACTTTTTTT	NA	False	NA	-25	True	AATAAA	-14	NA	62855897	62851989	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62852682_62852810
H1_mix_00016251	chr11	-	2573	4	FSM	ENSG00000255717.8	ENST00000662400.1	2560	4	0	-13	0	0	multi-exon	FALSE	canonical	3	151	junction_3	17.4610678049451	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTTGTTGATGAAAATAAT	316	False	NA	-61	True	AAAAAG	-40	NA	62855564	62852025	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62853116_62853551_62854552_62854887_62854939_62855132
H1_mix_00016252	chr11	-	1828	9	FSM	ENSG00000255717.8	ENST00000656241.1	1828	9	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_8	27.712812921102	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGAGGACTGGCTGTCAA	43	False	NA	-96	True	AAAAAG	-5	NA	62855837	62852060	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62852682_62852810_62852840_62853074_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423
H1_mix_00016253	chr11	-	3302	3	FSM	ENSG00000255717.8	ENST00000668309.1	3302	3	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_2	30.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATTTGCATATTGCAAATA	24	False	NA	NA	False	NA	NA	NA	62855856	62852137	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62853591_62853800_62855217_62855423
H1_mix_00016255	chr11	-	1189	1	FSM	ENSG00000271100.1	ENST00000604083.1	169	1	52	-1072	52	1072	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTGGGGGATAAGAGTGA	NA	False	NA	NA	False	NA	NA	NA	63698712	63697523	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_63697500_63698700
H1_mix_00016257	chr11	-	891	2	NNC	ENSG00000188070.9	novel	390	2	NA	NA	4	-27	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAACTTCCACAAGGGT	11	True	NA	NA	False	AATAAA	-10	NA	63768771	63767349	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_63767953_63768483
H1_mix_00016259	chr11	-	1218	10	NIC	ENSG00000133315.12	novel	1257	11	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_7	70.9522531158963	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTACTGTCTGAGCTCT	21	True	NA	-8	True	AATAAA	-16	NA	64166104	63998557	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_63998688_63998837_63998873_63998954_63999037_63999330_63999405_63999529_63999561_63999641_63999764_64000226_64000344_64151238_64151356_64152291_64152394_64165696
H1_mix_00016260	chr11	-	918	7	FSM	ENSG00000149743.14	ENST00000541278.5	941	7	22	1	1	-1	multi-exon	FALSE	canonical	0	0	junction_6	127.500871456717	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTACATCTGGTCTTCCT	8147	False	NA	-1	True	AAAAAG	-43	NA	64226232	64223800	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64223968_64224284_64224342_64224542_64224718_64224800_64224971_64225498_64225581_64225785_64225870_64226049
H1_mix_00016261	chr11	-	530	3	FSM	ENSG00000149743.14	ENST00000544286.5	527	3	0	-3	0	0	multi-exon	FALSE	canonical	3	265	junction_1	22.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGTTTGAAACCATGTTTC	9745	False	NA	-30	True	TATAAA	-31	NA	64224634	64223829	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64224211_64224284_64224342_64224542
H1_mix_00016263	chr11	-	904	8	NNC	ENSG00000149743.14	novel	968	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_7	91.2856025038439	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGTTTGAAACCATGTTTC	25	True	NA	-30	True	TATAAA	-31	NA	64226148	64223829	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_64223968_64224099_64224211_64224284_64224342_64224542_64224718_64224800_64224971_64225498_64225581_64225785_64225870_64226061
H1_mix_00016264	chr11	-	1809	5	FSM	ENSG00000149743.14	ENST00000539595.5	1809	5	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_4	22.0963797939844	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATTTTAAAAAGTAACAAG	15	True	NA	-56	True	AATAAA	-20	NA	64226158	64223855	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64223968_64224099_64224211_64224284_64224718_64224800_64225581_64225785
H1_mix_00016265	chr11	-	1769	4	FSM	ENSG00000149743.14	ENST00000536234.1	1748	4	0	-21	0	0	multi-exon	FALSE	canonical	2	14	junction_3	112.967055177851	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATTTTAAAAAGTAACAAG	8146	False	NA	-56	True	AATAAA	-20	NA	64226233	64223855	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64224718_64224800_64225581_64225785_64225870_64226190
H1_mix_00016267	chr11	-	631	5	FSM	ENSG00000002330.14	ENST00000394531.3	631	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	171.689217774443	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGGATCGGAACTTGGGC	37	True	NA	NA	False	NA	NA	NA	64284653	64270255	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64270338_64271612_64271804_64276903_64277044_64284181_64284377_64284630
H1_mix_00016269	chr11	-	2314	3	FSM	ENSG00000110076.20	ENST00000464307.5	3232	3	918	0	918	0	multi-exon	FALSE	canonical	2	3	junction_2	0.5	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCCTGTGCAGTTTTTTT	NA	False	NA	0	True	AAAAAG	-26	NA	64623078	64606173	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64608083_64620293_64620373_64622752
H1_mix_00016271	chr11	-	2137	16	ISM	ENSG00000068831.19	ENST00000394432.8	2268	17	1196	0	0	0	3prime_fragment	FALSE	canonical	3	31	junction_9	64.6125546795839	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCAGCGCCTAGAATCCC	9548	False	NA	-2	True	AATAAA	-24	NA	64742946	64726910	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_64727132_64727295_64727361_64728862_64729043_64729761_64729799_64730052_64730195_64735111_64735228_64735541_64735665_64735902_64735981_64736752_64737035_64739359_64739477_64739635_64739810_64740012_64740164_64740947_64741080_64741438_64741502_64742009_64742113_64742793
H1_mix_00016273	chr11	-	453	3	FSM	ENSG00000068831.19	ENST00000394429.5	453	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	105.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGAGGGTCATGTTGCT	9557	False	NA	-2	True	AATAAA	-17	NA	64742937	64740865	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64741080_64741438_64741534_64742793
H1_mix_00016274	chr11	-	620	5	NNC	ENSG00000068831.19	novel	667	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	91.5259526036195	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGAGGGTCATGTTGCT	9548	False	NA	-2	True	AATAAA	-17	NA	64742946	64740865	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_64741080_64741164_64741252_64741438_64741502_64742009_64742113_64742793
H1_mix_00016275	chr11	-	642	5	FSM	ENSG00000068831.19	ENST00000377487.5	642	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_4	63.5708266424151	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGAGGGTCATGTTGCT	-26	True	NA	-2	True	AATAAA	-17	NA	64744859	64740865	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64741080_64741438_64741502_64742009_64742113_64742793_64742938_64744741
H1_mix_00016276	chr11	-	2764	14	NNC	ENSG00000168066.21	novel	3094	14	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_13	320.627177547769	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTCTGCTTCTTTATT	28	True	NA	-28	True	AATAAA	-16	NA	64778504	64764611	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_64765519_64766899_64767080_64767191_64767252_64767570_64767845_64768105_64768287_64769021_64769130_64769222_64769339_64769425_64769610_64769963_64770054_64770255_64770409_64773429_64773506_64776497_64776627_64777986_64778150_64778361
H1_mix_00016278	chr11	-	2363	14	NNC	ENSG00000168066.21	novel	3631	13	NA	NA	0	-15	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_13	305.147010840434	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGACTGAGGATTCGCTTG	11	True	NA	NA	False	NA	NA	NA	64778521	64765666	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_64766156_64766899_64767080_64767191_64767252_64767570_64767845_64768105_64768287_64769021_64769130_64769222_64769339_64769425_64769610_64769963_64770054_64770255_64770409_64773429_64773506_64776497_64776627_64777986_64778150_64778361
H1_mix_00016284	chr11	-	2861	8	FSM	ENSG00000133895.18	ENST00000377316.6	2868	8	0	7	0	-1	multi-exon	FALSE	canonical	0	0	junction_1	166.077434607217	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAAAGCGCAAGTCCATG	248	False	NA	-17	True	AATACA	-15	NA	64810485	64803516	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64804817_64805634_64805771_64806231_64806369_64807010_64807099_64807178_64807220_64807551_64807681_64807890_64808100_64809664
H1_mix_00016285	chr11	-	2714	10	NIC	ENSG00000133895.18	novel	2712	10	NA	NA	12	-1	combination_of_known_junctions	FALSE	canonical	3	21	junction_8	166.476409925636	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAAAGCGCAAGTCCATG	15	True	NA	-17	True	AATACA	-15	NA	64810539	64803516	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_64804817_64805033_64805199_64805634_64805771_64806231_64806369_64807010_64807099_64807178_64807220_64807551_64807681_64807890_64808100_64809649_64810133_64810513
H1_mix_00016289	chr11	-	6318	41	FSM	ENSG00000110046.13	ENST00000377264.8	6318	41	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_23	12.1592557338021	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCCCTCTCAGATCCTCT	-2	True	NA	-14	True	AATAAA	-14	NA	64917209	64894545	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64895210_64895289_64895443_64896461_64896617_64896747_64896870_64897411_64897495_64897670_64897744_64897838_64897975_64898085_64898171_64898260_64898363_64898635_64898843_64900493_64900630_64900883_64901093_64901961_64902177_64902259_64902387_64902515_64902681_64903287_64903365_64903589_64903661_64905562_64905656_64905741_64905849_64906112_64906194_64906333_64906534_64906664_64906816_64907254_64907440_64907524_64907665_64907747_64907891_64908990_64909151_64909270_64909368_64909680_64909925_64910039_64910196_64910615_64910709_64910806_64910955_64911037_64911276_64911841_64911983_64912084_64912250_64912326_64912424_64913037_64913137_64913265_64913402_64913820_64913924_64914080_64914234_64914337_64914501_64916964
H1_mix_00016290	chr11	-	6335	41	NNC	ENSG00000110046.13	novel	6318	41	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_14	10.99488517448	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCCCTCTCAGATCCTCT	NA	False	NA	-14	True	AATAAA	-14	NA	64917250	64894545	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_64895210_64895289_64895443_64896461_64896617_64896747_64896870_64897411_64897495_64897670_64897744_64897838_64897975_64898085_64898171_64898260_64898363_64898635_64898843_64900493_64900630_64900883_64901093_64901961_64902177_64902259_64902387_64902515_64902681_64903287_64903365_64903589_64903661_64905562_64905656_64905741_64905849_64906112_64906194_64906333_64906534_64906664_64906816_64907254_64907416_64907524_64907665_64907747_64907891_64908990_64909151_64909270_64909368_64909680_64909925_64910039_64910196_64910615_64910709_64910806_64910955_64911037_64911276_64911841_64911983_64912084_64912250_64912326_64912424_64913037_64913137_64913265_64913402_64913820_64913924_64914080_64914234_64914337_64914501_64916964
H1_mix_00016291	chr11	-	582	3	FSM	ENSG00000149735.7	ENST00000533257.1	582	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	1	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAGGGGAGGGTTGTTCC	369	False	NA	NA	False	NA	NA	NA	64935523	64934643	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64934875_64934990_64935176_64935357
H1_mix_00016293	chr11	-	2065	3	FSM	ENSG00000168062.10	ENST00000301887.9	2066	3	0	1	0	0	multi-exon	FALSE	canonical	3	5	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCTTTGCCTAGTTACT	-1	True	NA	-2	True	AATAAA	-16	NA	64996971	64987945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64989813_64994447_64994550_64996875
H1_mix_00016296	chr11	-	271	2	FSM	ENSG00000168060.16	ENST00000534568.1	850	2	0	579	0	-28	multi-exon	FALSE	canonical	1	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCAAGGGCAGCGGGCA	1516	False	NA	NA	False	NA	NA	NA	65046371	65046026	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65046115_65046188
H1_mix_00016297	chr11	-	546	2	FSM	ENSG00000168060.16	ENST00000531746.1	1099	2	0	553	0	-28	multi-exon	FALSE	canonical	2	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCAAGGGCAGCGGGCA	31	False	NA	NA	False	NA	NA	NA	65047856	65046026	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65046363_65047646
H1_mix_00016299	chr11	-	1012	5	FSM	ENSG00000146670.10	ENST00000404147.3	1012	5	0	0	0	0	multi-exon	FALSE	canonical	3	430	junction_4	35.2845575287547	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCCAGACTCTCCCTCCT	17	True	NA	NA	False	NA	NA	NA	65084047	65079087	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65079788_65083363_65083400_65083484_65083551_65083628_65083724_65083932
H1_mix_00016301	chr11	-	1662	2	FSM	ENSG00000254614.2	ENST00000526623.2	1662	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTTTTGTTTCTCAAAATG	NA	False	NA	NA	False	AATAAA	-22	NA	65181834	65180020	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65181073_65181224
H1_mix_00016302	chr11	-	537	2	FSM	ENSG00000162241.13	ENST00000529431.1	539	2	2	0	-2	0	multi-exon	FALSE	canonical	2	2	junction_1	0	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	14	True	NA	NA	False	NA	NA	NA	65382640	65381587	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65381970_65382485
H1_mix_00016303	chr11	-	1992	12	FSM	ENSG00000168056.18	ENST00000529189.5	1997	12	5	0	5	0	multi-exon	FALSE	canonical	3	23	junction_9	44.6123801518134	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTTGGCTTTCGAAGCAA	7509	False	NA	-18	True	GATAAA	-18	NA	65546754	65538818	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65539232_65539327_65539460_65539547_65539629_65539719_65539882_65540244_65540383_65540485_65540615_65540870_65540955_65541125_65541294_65541599_65541729_65543104_65543225_65543426_65543550_65546441
H1_mix_00016304	chr11	-	1942	1	FSM	ENSG00000260233.3	ENST00000623234.1	1942	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGCCATTT	-4	True	NA	NA	False	NA	NA	NA	65570423	65568481	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65568500_65570400
H1_mix_00016305	chr11	-	1760	5	FSM	ENSG00000173327.8	ENST00000532507.5	1812	5	52	0	52	0	multi-exon	FALSE	canonical	3	223	junction_4	15.7003184681076	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAGCCTGTCACCTTTCT	7	True	NA	-1	True	AATAAA	-21	NA	65606974	65597755	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65598629_65599393_65599769_65605760_65605853_65605945_65606082_65606690
H1_mix_00016307	chr11	-	6255	1	FSM	ENSG00000173327.8	ENST00000527304.1	5605	1	-1146	496	0	-496	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACCTTGCCAGTTTTGC	1201	False	NA	NA	False	CATAAA	-11	NA	65615382	65609127	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65609100_65615400
H1_mix_00016308	chr11	-	3043	10	ISM	ENSG00000173039.20	ENST00000406246.8	2517	11	94	0	-29	0	3prime_fragment	TRUE	canonical	3	74	junction_2	11.0966572655524	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGAGATCCGCTTTTTTTC	1039	False	NA	-12	True	AATAAA	-17	NA	65662822	65653600	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_65655001_65655687_65655763_65655854_65655936_65658286_65658500_65658717_65658823_65659665_65659798_65660123_65660216_65661686_65661836_65661936_65662089_65662178
H1_mix_00016312	chr11	-	680	4	FSM	ENSG00000172638.13	ENST00000531645.5	674	4	0	-6	0	0	multi-exon	FALSE	canonical	0	0	junction_1	89.8257572562941	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTTTCAATCTTTTCTT	5176	False	NA	-33	True	TATAAA	-21	NA	65868416	65866440	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65866713_65866844_65866935_65867860_65868057_65868294
H1_mix_00016319	chr11	-	1132	4	FSM	ENSG00000175592.9	ENST00000532401.1	1132	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	15.3260852434302	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCCATTTGTGCCAGAG	-1	True	NA	NA	False	ACTAAA	-14	NA	65900419	65892644	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65893297_65894013_65894117_65896808_65897007_65900240
H1_mix_00016320	chr11	-	1963	5	ISM	ENSG00000175376.9	ENST00000529964.5	808	6	639	-161	609	117	3prime_fragment	FALSE	canonical	3	81	junction_4	7.39509972887452	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCACTTAGAAAGTGCCAG	949	False	NA	NA	False	NA	NA	NA	66001527	65998271	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_65998744_65999349_65999398_65999566_65999676_66000052_66000162_66000302
H1_mix_00016321	chr11	-	587	5	FSM	ENSG00000175376.9	ENST00000532707.5	584	5	0	-3	0	0	multi-exon	FALSE	canonical	3	7	junction_4	32.4836497333659	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGGAACAGGTGAGGAACA	12	True	NA	NA	False	NA	NA	NA	66002136	65999359	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65999398_65999566_65999676_66000052_66000162_66000302_66000407_66001909
H1_mix_00016323	chr11	-	678	2	FSM	ENSG00000175229.7	ENST00000527048.1	678	2	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTCTCCGAGCCCCCGT	0	True	NA	NA	False	NA	NA	NA	66049151	66044990	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66045528_66049010
H1_mix_00016325	chr11	-	515	4	FSM	ENSG00000174851.16	ENST00000526497.5	516	4	0	1	0	0	multi-exon	FALSE	canonical	1	1	junction_1	564.3001565361	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTCTGACCCTTGTTC	5990	False	NA	-8	True	NA	NA	NA	66285758	66284580	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66284784_66284868_66284967_66285380_66285537_66285700
H1_mix_00016328	chr11	-	555	5	FSM	ENSG00000174851.16	ENST00000528575.1	532	5	0	-23	0	0	multi-exon	FALSE	canonical	3	9	junction_1	605.080728085104	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGCCTCTACCTGGCCAC	5	True	NA	NA	False	NA	NA	NA	66289037	66285460	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66285537_66287597_66287677_66287811_66287917_66288080_66288293_66288954
H1_mix_00016332	chr11	-	573	2	FSM	ENSG00000174791.11	ENST00000528006.1	591	2	18	0	9	0	multi-exon	FALSE	canonical	3	11	junction_1	0	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGTGCTGCCAGGGGCAG	9	True	NA	NA	False	NA	NA	NA	66335682	66334998	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66335499_66335609
H1_mix_00016333	chr11	-	1131	8	FSM	ENSG00000174744.14	ENST00000524699.5	1131	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	137.023162052171	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCGTGCCCTGTGTGT	5724	False	NA	-12	True	ATTAAA	-14	NA	66342121	66337338	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66337890_66338720_66338786_66340120_66340214_66340773_66340871_66340966_66341047_66341205_66341334_66341532_66341624_66342095
H1_mix_00016334	chr11	-	2654	11	NIC	ENSG00000174669.12	novel	2455	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	23	junction_8	52.5904934375026	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCGTTCACCAAGTCTT	361	False	NA	-34	True	NA	NA	NA	66372099	66362520	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_66363548_66364224_66364425_66365935_66366022_66366125_66366232_66366430_66366565_66367463_66367549_66367771_66367870_66368536_66368672_66369368_66369533_66371243_66371326_66371562
H1_mix_00016336	chr11	-	909	2	ISM	ENSG00000174165.8	ENST00000534073.5	1615	5	21812	-9	21782	9	3prime_fragment	FALSE	canonical	1	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATATGATGGATATTGCGT	NA	False	NA	-7	True	AATAAA	-12	NA	66524224	66520627	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_66521467_66524154
H1_mix_00016337	chr11	-	2027	13	FSM	ENSG00000174080.12	ENST00000310325.10	2044	13	0	17	0	-1	multi-exon	FALSE	canonical	2	4	junction_12	5.75905084772366	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTCCTTGTCCCGAGTG	-3	True	NA	-16	True	AATAAA	-2	NA	66568606	66563480	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66564008_66564087_66564147_66564557_66564649_66564741_66564807_66564886_66565007_66565670_66565752_66565830_66565928_66566021_66566168_66566290_66566405_66567245_66567322_66567443_66567663_66567983_66568083_66568273
H1_mix_00016338	chr11	-	1709	13	FSM	ENSG00000174080.12	ENST00000524994.6	1709	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	6.72061505121865	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTGGGGCACAGCCCCT	-3	True	NA	NA	False	NA	NA	NA	66568606	66563795	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66564008_66564087_66564147_66564557_66564649_66564741_66564807_66564886_66565007_66565670_66565752_66565830_66565928_66566021_66566168_66566290_66566402_66567245_66567322_66567443_66567663_66567983_66568083_66568273
H1_mix_00016340	chr11	-	613	1	FSM	ENSG00000182791.5	ENST00000333861.5	2888	1	2234	41	2234	-41	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAGCCTTGCACAATACAA	2256	False	NA	-47	True	NA	NA	NA	66590829	66590216	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66590200_66590800
H1_mix_00016345	chr11	-	4308	23	FSM	ENSG00000173599.15	ENST00000393960.7	4305	23	0	-3	0	0	multi-exon	TRUE	canonical	3	10	junction_21	24.5646810221303	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAGTGAGAATGACCATCG	-1	True	NA	97	True	NA	NA	NA	66958383	66848416	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66849148_66849229_66849371_66849610_66849860_66849936_66850117_66850219_66850465_66850673_66850924_66851039_66851281_66851789_66851947_66852438_66852661_66852746_66852837_66853238_66853384_66863773_66863957_66866186_66866350_66868845_66868965_66870301_66870454_66870774_66870893_66871051_66871198_66871314_66871481_66871686_66871872_66872023_66872160_66952429_66952469_66954248_66954437_66958321
H1_mix_00016346	chr11	-	3835	22	NNC	ENSG00000173599.15	novel	4017	22	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	20.2223468137997	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGCTGGATCCTGTGCA	12	True	NA	-10	True	AATAAA	-19	NA	66958370	66848523	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_66849148_66849229_66849371_66849610_66849695_66849936_66850117_66850219_66850465_66850673_66850924_66851039_66851281_66851789_66851947_66852438_66852661_66852746_66852837_66853238_66853384_66863773_66863957_66866186_66866350_66868845_66868965_66870301_66870454_66870774_66870893_66871051_66871198_66871314_66871481_66871686_66871872_66872023_66872160_66952429_66952469_66958321
H1_mix_00016347	chr11	-	3877	22	FSM	ENSG00000173599.15	ENST00000528224.2	3877	22	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_8	19.7168160326945	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGGGAAGTTTACTCAAT	-1	True	NA	-51	True	NA	NA	NA	66958383	66848564	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66849148_66849229_66849371_66849610_66849860_66849936_66850117_66850219_66850465_66850673_66850924_66851039_66851281_66851789_66851852_66852438_66852661_66852746_66852837_66853238_66853384_66863773_66863957_66866186_66866350_66868845_66868965_66870301_66870454_66870774_66870893_66871051_66871198_66871314_66871481_66871686_66871872_66872023_66872160_66952429_66952469_66958321
H1_mix_00016348	chr11	-	1702	12	FSM	ENSG00000173599.15	ENST00000524491.6	1702	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	26.2691095338704	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGTGGCTGCAGCCCCTG	6	True	NA	-12	True	AATAAA	-14	NA	66958376	66860429	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66860670_66863773_66863957_66866186_66866350_66868845_66868965_66870301_66870454_66870774_66870893_66871051_66871198_66871314_66871481_66871686_66871872_66872023_66872160_66952429_66952469_66958321
H1_mix_00016349	chr11	-	1075	2	FSM	ENSG00000175482.9	ENST00000533429.1	860	2	-215	0	197	0	multi-exon	FALSE	canonical	3	222	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGACCTTCAGTCCTTTA	3682	False	NA	-11	True	AATAAA	-18	NA	67353293	67351547	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67352020_67352690
H1_mix_00016350	chr11	-	899	4	FSM	ENSG00000175482.9	ENST00000530584.5	899	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	97.8241051865825	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGACCTTCAGTCCTTTA	18	True	NA	-11	True	AATAAA	-18	NA	67353518	67351547	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67352020_67352690_67352803_67352987_67353078_67353293
H1_mix_00016351	chr11	-	714	3	FSM	ENSG00000175482.9	ENST00000539074.1	714	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	64.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGCTCCCAGGGCAAGGG	22	True	NA	-71	True	NA	NA	NA	67353514	67351607	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67352020_67352987_67353078_67353302
H1_mix_00016352	chr11	-	584	4	FSM	ENSG00000175482.9	ENST00000531239.2	584	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	91.2249965744039	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCCTGCGCAGCTGAAGC	2	True	NA	NA	False	NA	NA	NA	67353534	67351808	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67352020_67352690_67352803_67352987_67353078_67353363
H1_mix_00016356	chr11	-	850	5	NNC	ENSG00000167797.8	novel	909	4	NA	NA	0	57705	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	283.975681177104	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCACTCTCTGGTGACCA	2	True	NA	NA	False	AAAAAG	-1	NA	67508076	67448791	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_67448819_67506496_67507013_67507364_67507498_67507591_67507690_67508000
H1_mix_00016359	chr11	-	680	6	FSM	ENSG00000172663.9	ENST00000536020.5	680	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	357.860531492368	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCCTCCAGGACCCTCG	-20	True	NA	NA	False	NA	NA	NA	67469268	67464536	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67464697_67464802_67464857_67467311_67467389_67467500_67467564_67468016_67468093_67469018
H1_mix_00016367	chr11	-	634	3	FSM	ENSG00000167797.8	ENST00000531506.1	634	3	0	0	0	0	multi-exon	FALSE	canonical	3	580	junction_2	45	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCTGTGGAGGGTTGCTG	573	False	NA	NA	False	NA	NA	NA	67508091	67507052	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67507498_67507591_67507690_67508000
H1_mix_00016368	chr11	-	772	2	FSM	ENSG00000167797.8	ENST00000526447.1	772	2	0	0	0	0	multi-exon	FALSE	canonical	3	670	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCAGGGAAGAGCATGGG	2	True	NA	NA	False	NA	NA	NA	67508076	67507210	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67507498_67507591
H1_mix_00016369	chr11	-	209	1	FSM	ENSG00000254610.3	ENST00000642106.1	209	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	195	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGACGCGGGCGCGGG	NA	False	NA	NA	False	NA	NA	NA	67955690	67955481	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67955500_67955700
H1_mix_00016373	chr11	-	754	3	NNC	ENSG00000255306.1	novel	739	4	NA	NA	364	9667	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	2.5	234	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCCCACAGGGACTGAGG	8822	False	NA	NA	False	GGGGCT	-44	NA	68030097	68015141	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_68015406_68029283_68029421_68029744
H1_mix_00016374	chr11	-	5911	11	NIC	ENSG00000110066.15	novel	5718	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_1	101.973722105256	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCGGTGTTCACTGTA	27	False	NA	NA	False	AATAAA	-18	NA	68213828	68154862	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_68159172_68166981_68167179_68171014_68171152_68171231_68171252_68171542_68171710_68173803_68173914_68175017_68175184_68180131_68180201_68185780_68185929_68189916_68190153_68213476
H1_mix_00016377	chr11	-	990	5	NIC	ENSG00000171067.11	novel	980	5	NA	NA	8	-11	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	91.9575309585898	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTCGCCACAATCGTGT	34	True	NA	-35	True	ATTAAA	-7	NA	68271908	68261348	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_68261726_68262730_68262919_68263691_68263867_68268053_68268252_68271856
H1_mix_00016382	chr11	-	1235	6	FSM	ENSG00000132749.11	ENST00000544963.1	1235	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	61.8986268022159	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCCGCTGTCCTATGTTG	26	True	NA	NA	False	NA	NA	NA	68751460	68738461	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_68738789_68742317_68742395_68744990_68745112_68747207_68747367_68750189_68750700_68751419
H1_mix_00016383	chr11	-	673	8	NNC	ENSG00000197345.13	novel	693	7	NA	NA	0	3221	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	492.095768014681	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCTTTTCAAGTTCACA	2	True	NA	NA	False	AAAAAG	-4	NA	68903778	68888054	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_68888089_68891277_68891396_68892889_68892994_68893402_68893456_68896514_68896679_68897926_68898013_68900547_68900606_68903722
H1_mix_00016385	chr11	-	1131	1	FSM	ENSG00000261625.1	ENST00000562276.1	1284	1	109	44	109	-44	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATTTACATAAAATAAAAC	NA	False	NA	-42	True	AATAAA	-14	NA	69001939	69000808	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_69000800_69001900
H1_mix_00016386	chr11	-	3716	3	FSM	ENSG00000149716.13	ENST00000544096.5	3776	3	63	-3	-26	0	multi-exon	FALSE	canonical	3	52	junction_1	5.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGGGACCATTTATAACA	2055	False	NA	2	True	AGTAAA	-21	NA	69673321	69665562	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_69667588_69667894_69668013_69671748
H1_mix_00016390	chr11	-	655	4	Intergenic	novelGene_251	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_2	6.84754619472471	232	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTTTCAAGTTGCTTT	NA	False	NA	NA	False	AATGAA	-9	NA	70219841	70208452	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_-_70208578_70209149_70209258_70217499_70217688_70219607
H1_mix_00016391	chr11	-	10788	23	NIC	ENSG00000162105.21	novel	10830	26	NA	NA	2	11	combination_of_known_splicesites	FALSE	canonical	3	22	junction_8	6.78720234724731	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAATTAATTTTCCATTA	-37	True	NA	NA	False	AATAAA	-25	NA	71252575	70467842	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_70473440_70485313_70487721_70490275_70490388_70492334_70492466_70502205_70502287_70502795_70502932_70659827_70659953_70661595_70661679_70698687_70698764_70798442_70798557_70807001_70807172_70820363_70820683_70896500_70896568_71056480_71056559_71075158_71075276_71092421_71092590_71094536_71094689_71109940_71110050_71113292_71113365_71118828_71119033_71147119_71147339_71224696_71224797_71252424
H1_mix_00016392	chr11	-	2838	2	ISM	ENSG00000162105.21	ENST00000338508.9	7271	11	175973	1699	1875	1685	3prime_fragment	FALSE	canonical	3	36	junction_1	0	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGCTGGTCTACTAGGC	NA	False	NA	NA	False	AAGAAA	-4	NA	70485845	70471133	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_70473440_70485313
H1_mix_00016393	chr11	-	454	5	FSM	ENSG00000162105.21	ENST00000426687.2	460	5	6	0	3	0	multi-exon	FALSE	canonical	1	2	junction_1	16.0779351908135	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCGCGCTGCTGAGAACA	NA	False	NA	NA	False	GATAAA	-30	NA	70698763	70492431	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_70492466_70502795_70502932_70659827_70659953_70661595_70661679_70698687
H1_mix_00016396	chr11	-	3466	1	NIC	ENSG00000248671.8	novel	1574	4	NA	NA	8418	3473	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGAGCCGGGTGGGCCA	NA	False	NA	NA	False	NA	NA	NA	71804997	71801531	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_71801500_71805000
H1_mix_00016398	chr11	-	7228	27	FSM	ENSG00000137497.19	ENST00000358965.10	7227	27	0	-1	0	1	multi-exon	TRUE	canonical	1	1	junction_24	114.372981923542	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGAGTTGACTTGATCGG	0	True	NA	-5	True	AATAAA	-21	NA	72080515	72002862	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_72003539_72003886_72004100_72004224_72004342_72004639_72004817_72005232_72005370_72006034_72006264_72007188_72007436_72008687_72008846_72008966_72009186_72009267_72009388_72010785_72010855_72012894_72016261_72016407_72016531_72017686_72017828_72018182_72018301_72018395_72018514_72018822_72018981_72019493_72019618_72021203_72021292_72022338_72022420_72023064_72023148_72024273_72024354_72029204_72029291_72035901_72035976_72062588_72062687_72069841_72069912_72080457
H1_mix_00016404	chr11	-	730	6	FSM	ENSG00000110200.9	ENST00000535503.5	734	6	4	0	-2	0	multi-exon	FALSE	canonical	3	30	junction_5	380.1965807316	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCCTTGATTGCCAGGT	-11	True	NA	-68	True	NA	NA	NA	72112776	72109649	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_72109929_72110087_72110226_72110543_72110604_72111156_72111282_72111411_72111497_72112733
H1_mix_00016405	chr11	-	401	5	FSM	ENSG00000186642.16	ENST00000542969.2	611	5	166	44	141	-44	multi-exon	FALSE	canonical	1	1	junction_2	1	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGGACCCCCCACATGA	457	False	NA	NA	False	NA	NA	NA	72674267	72605181	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_72605227_72608661_72608752_72631077_72631140_72642253_72642327_72674136
H1_mix_00016407	chr11	-	5611	31	FSM	ENSG00000186635.15	ENST00000465814.5	5612	31	0	1	0	-1	multi-exon	FALSE	canonical	3	8	junction_30	77.4947238347374	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGCTGAGGCCTGTGA	4670	False	NA	-5	True	TATAAA	-21	NA	72722088	72685070	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_72685682_72686041_72686192_72687438_72687503_72687687_72687739_72688454_72688538_72692752_72692786_72693324_72693471_72693691_72693806_72694979_72695098_72695386_72695456_72695541_72695629_72695717_72695866_72696548_72697196_72697322_72697487_72697597_72697650_72697910_72698107_72699004_72699108_72699416_72699553_72701648_72701784_72702904_72703080_72704151_72704335_72705804_72705891_72707174_72707375_72709869_72709977_72710384_72710588_72711020_72711142_72711429_72711500_72712195_72712340_72712437_72713244_72714151_72714322_72721849
H1_mix_00016408	chr11	-	5006	34	NIC	ENSG00000186635.15	novel	5156	35	NA	NA	16	-1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_25	78.9883463641358	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGCTGAGGCCTGTGA	14	True	NA	-5	True	TATAAA	-21	NA	72752392	72685070	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_72685682_72686041_72686192_72687438_72687503_72687687_72687739_72688454_72688538_72692752_72692786_72693324_72693471_72693691_72693806_72694979_72695098_72695386_72695456_72695541_72695629_72695717_72695866_72696548_72696655_72696982_72697196_72697322_72697487_72697597_72697650_72697910_72698107_72699004_72699108_72699416_72699553_72701648_72701784_72702904_72703080_72704151_72704335_72705804_72705891_72707174_72707375_72709869_72709977_72710433_72710588_72711020_72711142_72711429_72711500_72712195_72712340_72712437_72712569_72713175_72713244_72714151_72714322_72726619_72727173_72752327
H1_mix_00016415	chr11	-	747	5	FSM	ENSG00000214530.10	ENST00000538437.5	747	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	53.4666952410564	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTCCTGCACTTTCTCCC	4866	False	NA	-131	True	NA	NA	NA	72781116	72754842	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_72755143_72755700_72755754_72758529_72758634_72759233_72759382_72780974
H1_mix_00016416	chr11	-	1085	7	FSM	ENSG00000214530.10	ENST00000545082.5	1085	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	51.0522608053094	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCACCGCTTCAGGGACGGA	1	True	NA	NA	False	NA	NA	NA	72781842	72754892	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_72755143_72755700_72755754_72757766_72757885_72758529_72758634_72759233_72759382_72781061_72781295_72781663
H1_mix_00016417	chr11	-	451	4	FSM	ENSG00000214530.10	ENST00000536728.5	451	4	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	70.8378429936994	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCGGAGCAGAGCCCGTT	NA	False	NA	NA	False	NA	NA	NA	72759381	72755061	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_72755143_72757766_72757885_72758529_72758634_72759233
H1_mix_00016418	chr11	-	4357	19	FSM	ENSG00000137478.15	ENST00000311172.11	4340	19	0	-17	0	17	multi-exon	FALSE	canonical	1	2	junction_18	14.9814700361628	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAGAAAGGTTTGGGTAAA	464	False	NA	12	True	AATAAA	-31	NA	73142046	72836727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_72838875_72840876_72840960_72841453_72841584_72842620_72842842_72843150_72843329_72843448_72843533_72849754_72849890_72867864_72868027_72887469_72887575_72889828_72889946_72902542_72902639_72921827_72921951_72984087_72984217_72985061_72985117_72988963_72989098_73000989_73001135_73015808_73015886_73083694_73083741_73141856
H1_mix_00016419	chr11	-	316	4	FSM	ENSG00000137478.15	ENST00000543644.1	321	4	0	5	0	-5	multi-exon	FALSE	canonical	0	0	junction_1	26.8824602048746	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAACTACTTCTGAGCTAT	NA	False	NA	NA	False	AATAAA	-17	NA	72989012	72983769	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_72983853_72984087_72984217_72985061_72985117_72988963
H1_mix_00016420	chr11	-	1364	6	FSM	ENSG00000054965.11	ENST00000450446.6	1364	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	6.54217089351845	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGCACTTCCTCAAAAGG	23	True	NA	NA	False	NA	NA	NA	73598098	73405982	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_73406745_73407512_73407644_73419873_73420000_73430689_73430771_73468404_73468493_73597922
H1_mix_00016421	chr11	-	1267	7	FSM	ENSG00000175582.20	ENST00000536566.5	1267	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	197.356699067112	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGATGGAAATCTCAACAG	31	True	NA	NA	False	NA	NA	NA	73761074	73677590	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_73677963_73679653_73679721_73707419_73707514_73716250_73716363_73720845_73720900_73730764_73730824_73760565
H1_mix_00016425	chr11	-	481	1	FSM	ENSG00000256898.1	ENST00000543613.1	532	1	-116	167	-116	-167	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCAAACAAACAGGAAGATG	NA	False	NA	NA	False	NA	NA	NA	73922312	73921831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_73921800_73922300
H1_mix_00016429	chr11	-	2640	8	FSM	ENSG00000168014.18	ENST00000539061.6	2640	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	23.6202956659509	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAATGATCAATAAAAAAT	-5	True	NA	-58	True	NA	NA	NA	74171000	74128577	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_74129793_74132843_74132973_74133424_74133558_74138719_74138968_74139604_74139829_74161398_74161557_74168343_74168614_74170737
H1_mix_00016432	chr11	-	733	2	FSM	ENSG00000175538.11	ENST00000525550.1	935	2	202	0	202	0	multi-exon	FALSE	canonical	2	3	junction_1	0	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCCTTGTGCATAAGGAT	5381	False	NA	NA	False	GGGGCT	-9	NA	74462165	74457081	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_74457604_74461954
H1_mix_00016437	chr11	-	571	5	FSM	ENSG00000166435.16	ENST00000534041.5	571	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	8.16624148553054	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGCTCCTCACAGGCAAT	-11	True	NA	NA	False	NA	NA	NA	74949095	74921274	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_74921348_74930299_74930373_74933800_74933873_74936883_74937069_74948927
H1_mix_00016444	chr11	-	4202	3	FSM	ENSG00000137507.11	ENST00000260061.9	4207	3	0	5	0	-2	multi-exon	FALSE	canonical	2	3	junction_2	3	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAGTGTGGCTGCCAGCT	-2	True	NA	NA	False	ATTAAA	-15	NA	76670747	76657528	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_76661509_76665870_76665959_76670613
H1_mix_00016445	chr11	-	2083	14	NIC	ENSG00000149269.10	novel	2543	16	NA	NA	55	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	202.660207646478	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACAATTAATTCTTGACT	17	False	NA	6	True	NA	NA	NA	77412009	77322947	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_77323361_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77411773
H1_mix_00016451	chr11	-	6601	16	NIC	ENSG00000048649.14	novel	11242	16	NA	NA	-152	1290	combination_of_known_junctions	FALSE	canonical	3	22	junction_10	33.1679899233516	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTGGTTCCAAGTAAGT	NA	False	NA	-12	True	AATAAA	-37	NA	77821021	77664939	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_77667492_77672041_77672231_77675035_77675257_77676791_77677000_77678085_77678154_77683709_77683820_77685104_77685160_77691158_77691239_77693506_77693612_77698486_77698694_77700729_77702496_77725544_77725700_77740730_77740937_77747035_77747129_77764597_77764690_77820527
H1_mix_00016454	chr11	-	567	1	FSM	ENSG00000227376.1	ENST00000435241.1	552	1	127	-142	127	142	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGAAATTTGGTACCCCC	5971	False	NA	NA	False	AAAACA	-38	NA	77734899	77734332	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_77734300_77734900
H1_mix_00016455	chr11	-	1382	9	FSM	ENSG00000149262.17	ENST00000535943.1	1382	9	2	-2	2	0	multi-exon	FALSE	canonical	2	5	junction_8	47.5090451914159	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTCTAGTTCCTGGTCT	NA	False	NA	-1	True	AATAAA	-17	NA	77911152	77878719	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_77879128_77883831_77883953_77891318_77891463_77891680_77891841_77894289_77894350_77901420_77901552_77903539_77903621_77907716_77907811_77910969
H1_mix_00016456	chr11	-	312	1	FSM	ENSG00000255115.2	ENST00000532139.2	286	1	-33	7	-33	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATGATATTCCAAATGGC	NA	False	NA	NA	False	NA	NA	NA	77915308	77914996	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_77915000_77915300
H1_mix_00016457	chr11	-	1087	2	FSM	ENSG00000149262.17	ENST00000531059.1	573	2	-514	0	-514	0	multi-exon	FALSE	canonical	3	177	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTTGAGGGTATGTTGA	NA	False	NA	NA	False	NA	NA	NA	77923319	77921350	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_77921474_77922355
H1_mix_00016458	chr11	-	656	3	FSM	ENSG00000259112.2	ENST00000530054.1	656	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2101.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTACCGTGAGGCTCAGTT	-9	True	NA	NA	False	NA	NA	NA	78079865	78017045	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_78017271_78072997_78073142_78079578
H1_mix_00016462	chr11	-	2301	12	FSM	ENSG00000159063.14	ENST00000679581.1	2301	12	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	197.732727197494	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	NA	False	NA	-16	True	AATAAA	-14	NA	78128267	78100945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106913_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357
H1_mix_00016463	chr11	-	1624	13	NNC	ENSG00000159063.14	novel	2443	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	196.481692672767	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	19	True	NA	-16	True	AATAAA	-14	NA	78139592	78100945	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139472
H1_mix_00016469	chr11	-	2479	14	FSM	ENSG00000159063.14	ENST00000680829.1	2479	14	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_13	271.526868351341	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTAGATATGTGCCAAGC	-6	True	NA	-24	True	AATAAA	-6	NA	78139617	78100953	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_78101196_78102873_78102949_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78138709
H1_mix_00016475	chr11	-	1202	8	FSM	ENSG00000159063.14	ENST00000530454.6	1202	8	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_4	47.1467530857705	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGTAATTTTTGCCTTA	-15	True	NA	NA	False	AATAAA	-17	NA	78139626	78112383	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
H1_mix_00016476	chr11	-	227	1	FSM	ENSG00000252494.1	ENST00000516685.1	103	1	61	-185	61	185	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAAGTGTGTAGTTCAGT	6150	False	NA	NA	False	AATAGA	-16	NA	78133461	78133234	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_78133200_78133500
H1_mix_00016477	chr11	-	3384	2	FSM	ENSG00000188997.8	ENST00000340067.4	3389	2	13	-8	5	8	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTGTCTGCTTGTAAC	8	True	NA	NA	False	TATAAA	-19	NA	78188613	78171240	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_78174584_78188572
H1_mix_00016478	chr11	-	2540	15	NNC	ENSG00000137513.10	novel	2512	14	NA	NA	0	4266	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	178.689960660403	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCGGGTGTGGTGGCAG	-45	True	NA	NA	False	NA	NA	NA	78574864	78431701	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_78431732_78435969_78436815_78441090_78441118_78443660_78443759_78465875_78466014_78469246_78469314_78478437_78478476_78478584_78478684_78493062_78493196_78528841_78528937_78559538_78559620_78566131_78566273_78568631_78568753_78571334_78571445_78574347
H1_mix_00016479	chr11	-	2264	13	NIC	ENSG00000137513.10	novel	2512	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	83	junction_1	169.852305122879	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTAAGGTCTTAATTGAT	-45	True	NA	-2	True	ATTAAA	-19	NA	78574864	78436188	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_78436815_78443660_78443759_78465875_78466014_78469246_78469314_78478437_78478476_78478584_78478684_78493062_78493196_78528841_78528937_78559538_78559620_78566131_78566273_78568631_78568753_78571334_78571445_78574347
H1_mix_00016482	chr11	-	572	1	FSM	ENSG00000211997.1	ENST00000390708.1	88	1	79	-563	79	563	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTCACCTTTTCTGGG	-1	True	NA	NA	False	AATAAA	-22	NA	79402030	79401458	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_79401500_79402000
H1_mix_00016484	chr11	-	3246	9	FSM	ENSG00000137509.12	ENST00000680566.1	3333	9	87	0	4	0	multi-exon	FALSE	canonical	3	5	junction_8	121.433559508894	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTAAGGTTTAATTTTAA	37	False	NA	-115	True	AATATA	-37	NA	82901653	82823043	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_82825123_82838386_82838575_82839260_82839426_82849048_82849219_82849913_82850072_82850323_82850506_82853176_82853279_82859976_82860118_82901592
H1_mix_00016485	chr11	-	508	3	FSM	ENSG00000137502.10	ENST00000532548.5	644	3	89	47	89	-47	multi-exon	FALSE	canonical	3	27	junction_1	1.5	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTGAAGAGAAAATGAAAT	155	False	NA	NA	False	AATATA	-45	NA	82997324	82987447	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_82987771_82994038_82994123_82997223
H1_mix_00016488	chr11	-	3380	7	FSM	ENSG00000137500.10	ENST00000529856.5	1039	7	377	-2718	0	3	multi-exon	FALSE	canonical	2	34	junction_6	372.831396210137	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTTTTTAATATTTTAAA	5	True	NA	NA	False	AATAAA	-33	NA	83285978	83259077	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83285872
H1_mix_00016495	chr11	-	6043	2	NIC	ENSG00000137504.15	novel	2850	4	NA	NA	0	-107	intron_retention	FALSE	canonical	3	320	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAACATTTTGGCATGCT	1003	False	NA	NA	False	AAGAAA	-44	NA	85664104	85657848	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_85663602_85663814
H1_mix_00016496	chr11	-	4221	4	NIC	ENSG00000137504.15	novel	4368	5	NA	NA	0	-10	intron_retention	FALSE	canonical	3	40	junction_2	130.830679378602	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTCAAAACTCTGGATTG	5	True	NA	-15	True	NA	NA	NA	85665102	85659717	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_85662458_85663178_85663294_85663523_85663602_85663814
H1_mix_00016498	chr11	-	2212	9	FSM	ENSG00000137501.18	ENST00000525702.5	2727	9	535	-20	535	7	multi-exon	FALSE	canonical	2	6	junction_5	3.78937659780603	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTCTCATTTTAAATAAA	4729	False	NA	11	True	AATAAA	-38	NA	85714602	85694267	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_85695341_85696182_85696389_85697978_85698079_85700514_85700594_85704857_85705029_85707428_85707532_85709330_85709501_85711112_85711233_85714412
H1_mix_00016499	chr11	-	4758	13	ISM	ENSG00000137501.18	ENST00000359152.10	8263	20	84673	39	0	7	3prime_fragment	FALSE	canonical	2	3	junction_12	4.69633426786846	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTCTCATTTTAAATAAA	NA	False	NA	11	True	AATAAA	-38	NA	85726468	85694267	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_85695341_85696182_85696389_85697978_85698079_85700514_85700594_85704857_85705029_85707428_85707532_85709330_85709501_85711112_85711233_85714412_85714508_85717482_85717531_85718789_85718844_85720857_85720960_85724031
H1_mix_00016500	chr11	-	1910	12	FSM	ENSG00000137501.18	ENST00000529581.5	1910	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_11	4.43315830554059	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATGGACCTTA	0	True	NA	NA	False	NA	NA	NA	85719138	85694725	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_85695341_85696182_85696389_85697978_85698079_85700514_85700594_85704857_85705029_85707428_85707532_85709330_85709501_85711112_85711233_85714412_85714508_85717482_85717531_85718789_85718844_85718989
H1_mix_00016501	chr11	-	2598	3	FSM	ENSG00000073921.18	ENST00000526548.3	738	3	-256	-1604	-256	-32	multi-exon	FALSE	canonical	3	171	junction_2	7.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTCAGTATTATTAAACCA	NA	False	NA	-5	True	AATAAA	-17	NA	85977261	85957206	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_85959061_85974707_85974813_85976622
H1_mix_00016503	chr11	-	478	4	FSM	ENSG00000151376.18	ENST00000530335.1	814	4	336	0	-84	0	multi-exon	FALSE	canonical	0	0	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCAGGCCCCGGTGAGCCC	353	False	NA	NA	False	GGGGCT	-28	NA	86672282	86556564	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_86556703_86559689_86559824_86671761_86671959_86672273
H1_mix_00016504	chr11	-	214	1	FSM	ENSG00000271318.1	ENST00000605633.1	586	1	315	57	315	-57	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGTACCAATTTTAGAAGA	NA	False	NA	NA	False	AATATA	-24	NA	86821413	86821199	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_86821200_86821400
H1_mix_00016505	chr11	-	631	1	FSM	ENSG00000197882.3	ENST00000526052.1	910	1	36	243	36	-243	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGAGTGTTTCATCATC	NA	False	NA	-2	True	TATAAA	-13	NA	86833413	86832782	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_86832800_86833400
H1_mix_00016506	chr11	-	1007	3	FSM	ENSG00000123892.12	ENST00000526372.1	1007	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	48.5	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCTTTTTCCAGATTT	38	True	NA	NA	False	NA	NA	NA	88175434	88113611	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_88114141_88149674_88149956_88175237
H1_mix_00016507	chr11	-	1662	6	FSM	ENSG00000109861.17	ENST00000677208.1	1662	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	675.283229467458	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGAGTTTATGTTTACT	1	True	NA	-6	True	AATAAA	-19	NA	88337695	88293591	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_88294509_88296132_88296265_88300529_88300646_88309162_88309319_88334936_88335083_88337500
H1_mix_00016515	chr11	-	662	1	FSM	ENSG00000279696.1	ENST00000624493.1	3152	1	2168	322	2168	-322	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGCATTAAGAAATTCAAAA	7599	False	NA	NA	False	AAAACA	-12	NA	93727637	93726975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_93727000_93727600
H1_mix_00016516	chr11	-	2526	12	FSM	ENSG00000166012.17	ENST00000323981.6	2540	12	0	14	0	-14	multi-exon	FALSE	canonical	3	191	junction_6	92.4355482404491	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGGTGCCTTAGAGCCT	-4	True	NA	NA	False	AAAAAG	-44	NA	93741494	93729961	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_93731217_93731752_93731800_93732243_93732292_93733086_93733122_93733349_93733398_93734624_93734661_93736140_93736305_93736693_93736752_93737063_93737240_93738108_93738500_93739236_93739332_93741321
H1_mix_00016517	chr11	-	1728	9	FSM	ENSG00000166012.17	ENST00000546088.5	1728	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	182.370459162113	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGCATGTATTTTTGGC	5315	False	NA	-27	True	ATTAAA	-24	NA	93736175	93730271	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_93730448_93730676_93730713_93731149_93731217_93731752_93731800_93732243_93732292_93733086_93733122_93733349_93733420_93734624_93734661_93734962
H1_mix_00016518	chr11	-	556	10	FSM	ENSG00000166012.17	ENST00000393259.6	547	10	0	-9	0	0	multi-exon	FALSE	canonical	0	0	junction_2	160.104672551551	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGCATGTATTTTTGGC	4749	False	NA	-27	True	ATTAAA	-24	NA	93736741	93730271	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_93730448_93730676_93730713_93731149_93731217_93731752_93731800_93732243_93732292_93733086_93733122_93733349_93733398_93734624_93734661_93736289_93736305_93736693
H1_mix_00016522	chr11	-	392	1	FSM	ENSG00000256745.1	ENST00000397300.2	549	1	353	-196	353	196	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTAAGCTGGCGCTTAAT	381	False	NA	NA	False	AAGAAA	-35	NA	94188644	94188252	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_94188300_94188600
H1_mix_00016528	chr11	-	9082	8	ISM	ENSG00000149212.12	ENST00000536441.7	9563	10	39601	-5	39445	5	3prime_fragment	FALSE	canonical	3	8	junction_6	6.6944997222057	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCGCTTGGTTTATTTC	NA	False	NA	0	True	NA	NA	NA	95191601	95165507	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_95173342_95175497_95175643_95177718_95177910_95178709_95178829_95184419_95184595_95185255_95185493_95189778_95189962_95191403
H1_mix_00016529	chr11	-	494	2	ISM	ENSG00000149212.12	ENST00000416495.6	1408	6	-162	9320	-6	-1890	5prime_fragment	FALSE	canonical	3	13	junction_1	0	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTATCTGTCTTAAAAT	-8	True	NA	NA	False	NA	NA	NA	95231208	95193454	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_95193523_95230782
H1_mix_00016535	chr11	-	4508	16	FSM	ENSG00000087053.20	ENST00000676440.1	4506	16	0	-2	0	0	multi-exon	FALSE	canonical	3	29	junction_15	196.483711510366	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATGGATGACACATTCC	607	False	NA	-4	True	AATAAA	-18	NA	95923864	95832879	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95887611_95887685_95888155_95888262_95923691
H1_mix_00016536	chr11	-	5513	15	FSM	ENSG00000087053.20	ENST00000675024.1	5511	15	0	-2	0	0	multi-exon	FALSE	canonical	3	50	junction_13	183.879077945596	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATGGATGACACATTCC	-12	True	NA	-4	True	AATAAA	-18	NA	95924107	95832879	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95882373_95882497_95888155_95888262_95923874
H1_mix_00016537	chr11	-	5393	14	FSM	ENSG00000087053.20	ENST00000675495.1	5412	14	21	-2	-3	0	multi-exon	FALSE	canonical	3	247	junction_13	92.7569197086997	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATGGATGACACATTCC	-15	True	NA	-4	True	AATAAA	-18	NA	95924110	95832879	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95888155_95888262_95923874
H1_mix_00016542	chr11	-	418	1	FSM	ENSG00000222578.1	ENST00000410646.1	108	1	-313	3	-313	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTCCTTAGTAATTTT	NA	False	NA	NA	False	AATACA	-10	NA	95840437	95840019	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_95840000_95840400
H1_mix_00016544	chr11	-	2651	2	FSM	ENSG00000149231.16	ENST00000545264.1	557	2	-617	-1477	-259	182	multi-exon	FALSE	canonical	3	175	junction_1	0	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGTCAAGGAGGAAGGGTA	NA	False	NA	NA	False	AAAAAG	-20	NA	96359899	96351970	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_96353715_96358992
H1_mix_00016550	chr11	-	5464	8	FSM	ENSG00000149231.16	ENST00000530203.2	5456	8	0	-8	0	0	multi-exon	FALSE	canonical	3	70	junction_7	34.8864045795751	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACCCTGTGTGTTCTATA	15	False	NA	NA	False	AATAAA	-26	NA	96389929	96352768	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_96353715_96358992_96359179_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961_96387614_96389843
H1_mix_00016557	chr11	-	3784	3	ISM	ENSG00000149231.16	ENST00000680859.1	7010	8	7	27293	-1	-4	5prime_fragment	FALSE	canonical	1	5	junction_2	79.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACATTCATGTGCAGGTT	-4	True	NA	NA	False	AATAAA	-8	NA	96389896	96380542	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_96383474_96383961_96384762_96389843
H1_mix_00016559	chr11	-	1535	8	FSM	ENSG00000137692.12	ENST00000531571.5	1535	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	353.301744191816	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTGACAAAGGCCTTAAAG	10	True	NA	-35	True	AATAAA	-10	NA	103092161	103062097	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_103062415_103064274_103064378_103066268_103066374_103066458_103066568_103082747_103082840_103083255_103083327_103089226_103089319_103091515
H1_mix_00016562	chr11	-	651	4	FSM	ENSG00000137692.12	ENST00000525420.1	651	4	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_3	428.787437626928	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACAGATATGCCTTTGAT	11	False	103092205	NA	False	NA	NA	NA	103092194	103066487	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_103066568_103082747_103082840_103083255_103083327_103091786
H1_mix_00016563	chr11	-	3838	7	FSM	ENSG00000170962.13	ENST00000393158.7	3838	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	2.6718699236469	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTCCATTATTTAGTACT	-4	True	NA	-10	True	AATAAA	-19	NA	104164147	103907188	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_103909820_103926911_103927127_103943451_103943651_103947661_103947725_103996064_103996246_104000050_104000256_104163803
H1_mix_00016565	chr11	-	4673	1	FSM	ENSG00000261098.1	ENST00000561746.1	4140	1	-548	15	-548	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATTTTCTTGTCCATTTT	NA	False	NA	-16	True	AATAAA	-3	NA	107316819	107312146	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_107312100_107316800
H1_mix_00016566	chr11	-	3244	18	NNC	ENSG00000152404.16	novel	3244	18	NA	NA	12	15	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_10	28.1987508619267	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTTATTTCTGGATT	9	True	NA	3	True	ATTAAA	-36	NA	107457813	107326344	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_107327054_107329917_107330020_107334880_107334962_107336557_107336714_107348936_107349054_107353523_107353737_107390073_107390212_107392778_107392896_107416208_107416299_107418193_107418285_107428798_107429452_107433633_107433750_107439089_107439184_107441502_107441623_107442938_107443050_107454449_107454573_107455665_107455777_107457711
H1_mix_00016567	chr11	-	974	8	FSM	ENSG00000137760.15	ENST00000393100.3	999	8	25	0	-8	0	multi-exon	FALSE	canonical	3	11	junction_5	10.5945692672795	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGACCCATGGGTATGT	22	False	NA	NA	False	NA	NA	NA	107565709	107532313	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_107532407_107549752_107549824_107551807_107551913_107553107_107553204_107553846_107553974_107556765_107557004_107560764_107560900_107565600
H1_mix_00016568	chr11	-	4478	9	NNC	ENSG00000178202.13	novel	4253	8	NA	NA	-190	44285	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	34.0541847648714	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTGCCATTCTAACTGGC	18	False	NA	NA	False	NA	NA	NA	108498574	108427826	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_108427849_108472102_108474953_108477606_108477712_108479300_108479496_108481179_108481377_108482005_108482223_108486156_108486441_108490969_108491168_108498164
H1_mix_00016574	chr11	-	2206	4	FSM	ENSG00000255561.7	ENST00000531487.1	2206	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	5.43650214343336	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGGAGTCTTGCTCTGCCG	NA	False	NA	NA	False	NA	NA	NA	111879457	111874758	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_111876105_111876480_111876640_111876807_111877012_111878960
H1_mix_00016575	chr11	-	237	1	FSM	ENSG00000271025.1	ENST00000604143.1	237	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAACTAAAAGAAGCCATT	NA	False	NA	NA	False	NA	NA	NA	112036863	112036626	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_112036600_112036900
H1_mix_00016577	chr11	-	1093	6	FSM	ENSG00000150773.12	ENST00000280350.10	1090	6	0	-3	0	3	multi-exon	TRUE	canonical	2	6	junction_1	2.87054001888146	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGTAGTTTATCTTAAACA	4	True	NA	NA	False	ATTAAA	-24	NA	112074017	112067794	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_112068006_112070435_112070702_112071037_112071284_112071634_112071759_112072997_112073206_112073979
H1_mix_00016579	chr11	-	2680	15	NIC	ENSG00000086827.9	novel	2873	16	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	3	13	junction_9	78.5610382740317	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAAGGGTGAGTGTCTTTA	21	True	NA	-6	True	AATAAA	-15	NA	113773692	113733187	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_113733815_113736619_113736823_113737571_113737704_113738263_113738395_113739212_113739383_113741693_113741766_113743801_113744041_113747530_113747714_113748256_113748421_113758553_113758707_113760208_113760369_113760512_113760591_113760816_113760919_113768832_113768968_113773561
H1_mix_00016581	chr11	-	4337	23	NIC	ENSG00000048028.11	novel	4669	25	NA	NA	16	2	combination_of_known_junctions	FALSE	canonical	3	57	junction_11	89.3550929977027	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTGCAGTATGGTCTT	6	True	NA	-9	True	AATAAA	-17	NA	113875512	113797871	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_113799416_113801482_113801679_113803157_113803282_113803797_113803878_113804672_113804752_113804867_113805047_113808297_113808438_113809062_113809255_113812275_113812505_113813884_113813956_113815173_113815383_113823604_113823701_113827232_113827361_113829196_113829346_113830866_113830944_113831919_113831994_113833419_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113852500_113852634_113854257_113854336_113875444
H1_mix_00016582	chr11	-	4142	21	NIC	ENSG00000048028.11	novel	3431	22	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	57	junction_11	121.395593000735	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTGCAGTATGGTCTT	-10	True	NA	-9	True	AATAAA	-17	NA	113875528	113797871	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_113799416_113801482_113801679_113803157_113803282_113803797_113803878_113804672_113804752_113804867_113805047_113808297_113808438_113809062_113809255_113812275_113812505_113813884_113813956_113815173_113815383_113823604_113823701_113827232_113827361_113829196_113829346_113830866_113830944_113831919_113831994_113833419_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113875444
H1_mix_00016583	chr11	-	4541	24	NIC	ENSG00000048028.11	novel	4669	25	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	3	79	junction_16	83.2123936530305	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTGCAGTATGGTCTT	-15	True	NA	-9	True	AATAAA	-17	NA	113875533	113797871	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_113799416_113801482_113801679_113803157_113803282_113803797_113803878_113804672_113804752_113804867_113805047_113808297_113808438_113809062_113809255_113812275_113812505_113813884_113813956_113815173_113815383_113817657_113817838_113823604_113823701_113827232_113827361_113829196_113829346_113830866_113830947_113831919_113831994_113833419_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113852500_113852634_113854257_113854336_113875444
H1_mix_00016585	chr11	-	4676	25	NIC	ENSG00000048028.11	novel	4669	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_23	115.977099032525	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-10	True	NA	NA	False	NA	NA	NA	113875528	113798091	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_113799416_113801482_113801679_113803157_113803282_113803797_113803878_113804672_113804752_113804867_113805047_113808297_113808438_113809062_113809255_113812275_113812505_113813884_113813956_113815173_113815383_113817657_113817838_113823604_113823701_113827232_113827361_113829196_113829346_113830866_113830944_113831919_113831994_113833419_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113852500_113852634_113854257_113854336_113874516_113874880_113875444
H1_mix_00016590	chr11	-	922	5	NNC	ENSG00000118137.10	novel	899	4	NA	NA	0	17120	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	197.173147258951	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	0	True	NA	NA	False	AAAAAG	-43	NA	116837622	116818630	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_116818658_116835754_116836412_116837000_116837158_116837344_116837408_116837604
H1_mix_00016594	chr11	-	1086	3	FSM	ENSG00000118137.10	ENST00000375323.5	1088	3	0	2	0	-2	multi-exon	FALSE	canonical	3	471	junction_2	9.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCAGCTTCTTTCTTTTGG	8	True	NA	-3	True	AATAAA	-16	NA	116837614	116835752	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_116836412_116837000_116837158_116837344
H1_mix_00016595	chr11	-	6222	24	FSM	ENSG00000160584.17	ENST00000375300.6	6207	24	0	-15	0	2	multi-exon	FALSE	canonical	3	36	junction_10	32.3094091652094	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTTGTCCTGCCTTTTGT	4	True	NA	4	True	ATTAAA	-31	NA	117098428	116843399	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_116845630_116846382_116846554_116847475_116847609_116849119_116849284_116857809_116858700_116859264_116859605_116861273_116861384_116861840_116861927_116862201_116862328_116863667_116863819_116870330_116870402_116873480_116873637_116873902_116874057_116875157_116875268_116875373_116875452_116875865_116876010_116876252_116876364_116876923_116877043_116896252_116896377_116897192_116897318_116927218_116927381_116954043_116954108_116956947_116957065_117098142
H1_mix_00016597	chr11	-	1221	5	FSM	ENSG00000160613.15	ENST00000525027.1	1312	5	90	1	90	-1	multi-exon	FALSE	canonical	3	153	junction_1	16.015617378047	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACTGGCCTGCACAAAGA	2382	False	NA	NA	False	NA	NA	NA	117230150	117224700	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_117224756_117225930_117226022_117227156_117227323_117228215_117228351_117229376
H1_mix_00016600	chr11	-	669	7	FSM	ENSG00000137726.17	ENST00000584394.5	669	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	163.285707342138	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAGCCACATGGCCATCT	-24	True	NA	NA	False	NA	NA	NA	117876664	117837945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_117838278_117839780_117839831_117841147_117841185_117841790_117841866_117841989_117842029_117842718_117842782_117876591
H1_mix_00016604	chr11	-	1540	9	FSM	ENSG00000160593.19	ENST00000292067.11	1959	9	421	-2	-53	2	multi-exon	FALSE	canonical	0	0	junction_5	1.36358901432946	350	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGGCACATTATTTCTAAA	2	True	NA	-6	True	GATAAA	-20	NA	118212938	118193960	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_118194418_118196734_118196822_118197997_118198092_118200473_118200613_118203427_118203666_118205881_118205992_118210486_118210713_118212406_118212562_118212904
H1_mix_00016605	chr11	-	309	2	FSM	ENSG00000149573.9	ENST00000528554.1	582	2	273	0	273	0	multi-exon	FALSE	canonical	3	13	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATATCACCAGTCATACAC	7070	False	NA	NA	False	NA	NA	NA	118257387	118255074	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_118255234_118257237
H1_mix_00016609	chr11	-	2058	13	NNC	ENSG00000110367.14	novel	6128	14	NA	NA	-54	-116	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_12	96.5480234563781	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGTCCCTGACAGAACAG	1618	False	NA	NA	False	NA	NA	NA	118791218	118754704	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_118754888_118755401_118755504_118756259_118756324_118757170_118757288_118758773_118758903_118759921_118760045_118763211_118763307_118765208_118765356_118768222_118768353_118779631_118779737_118781120_118781185_118786051_118786519_118790886
H1_mix_00016612	chr11	-	1462	3	FSM	ENSG00000118181.11	ENST00000527853.1	1462	3	0	0	0	0	multi-exon	FALSE	canonical	3	8537	junction_1	6386	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATTAAATCAAATGAATG	-36	True	NA	-24	True	AATAAA	-3	NA	119018691	119015725	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119015759_119015840_119015940_119017361
H1_mix_00016613	chr11	-	4552	6	NNC	ENSG00000137700.18	novel	2626	6	NA	NA	0	-4	intron_retention	FALSE	canonical	3	21	junction_3	106.736310597659	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAACACTGTCAGTGATT	17	True	NA	-11	True	ATTAAA	-13	NA	119030863	119024359	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_119025077_119025190_119025330_119025966_119026081_119026501_119026689_119026936_119027096_119027627
H1_mix_00016614	chr11	-	2674	9	ISM	ENSG00000137700.18	ENST00000525102.5	2844	10	44	239	1	-2	intron_retention	TRUE	canonical	3	74	junction_8	71.5856130797243	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTCAGTGATTCATTTTT	18	True	NA	-4	True	ATTAAA	-20	NA	119030862	119024352	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_119025077_119025190_119025330_119025966_119026081_119026602_119026689_119026936_119027096_119027627_119027873_119028193_119028427_119029221_119029565_119030231
H1_mix_00016616	chr11	-	4512	26	NNC	ENSG00000149428.20	novel	4598	26	NA	NA	7	0	intron_retention	FALSE	canonical	1	5	junction_10	300.932816422536	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGCTGTGAGTTTT	6	True	NA	-6	True	AATAAA	-16	NA	119057122	119044187	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_119045655_119045780_119045832_119046416_119046468_119046561_119046803_119047733_119047819_119047946_119048081_119048247_119048371_119048475_119048564_119048713_119048887_119049017_119049201_119049555_119049636_119049776_119049838_119051034_119051174_119051437_119051626_119051818_119051952_119052089_119052173_119052294_119052430_119052636_119052830_119054120_119054237_119054493_119054676_119054983_119055061_119055184_119055340_119055492_119055572_119055749_119055844_119056069_119056168_119057019
H1_mix_00016620	chr11	-	1702	8	FSM	ENSG00000172269.20	ENST00000682946.1	1689	8	0	-13	0	0	multi-exon	FALSE	canonical	3	33	junction_3	143.590119607791	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATGTAGGTATATTT	6	True	NA	-10	True	AATAAA	-18	NA	119101831	119096509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119097064_119097141_119097298_119097463_119097552_119098402_119098488_119100261_119100409_119100629_119100844_119101017_119101139_119101494
H1_mix_00016621	chr11	-	1773	9	FSM	ENSG00000172269.20	ENST00000682811.1	1760	9	0	-13	0	0	multi-exon	FALSE	canonical	3	21	junction_4	138.533163899479	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATGTAGGTATATTT	6	True	NA	-10	True	AATAAA	-18	NA	119101831	119096509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119097064_119097141_119097298_119097463_119097552_119097854_119097926_119098402_119098488_119100261_119100409_119100629_119100844_119101017_119101139_119101494
H1_mix_00016622	chr11	-	2346	2	FSM	ENSG00000172269.20	ENST00000461999.1	2125	2	-220	-1	-220	0	multi-exon	FALSE	canonical	3	437	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATGTAGGTATATTT	1520	False	NA	-10	True	AATAAA	-18	NA	119100629	119096509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119098488_119100261
H1_mix_00016630	chr11	-	2283	10	NNC	ENSG00000109971.14	novel	2264	9	NA	NA	0	37533	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3309.82221744781	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAAGAAAAGAAAAA	-1	True	NA	NA	False	AAAAAG	-20	NA	123062136	123019955	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_123019981_123057494_123057920_123058251_123058485_123058631_123058831_123059058_123059262_123059472_123060029_123060115_123060269_123060592_123060799_123061119_123061330_123062063
H1_mix_00016634	chr11	-	4668	8	NIC	ENSG00000166261.11	novel	4435	9	NA	NA	-8	-14	intron_retention	FALSE	canonical	3	45	junction_6	34.4744803574813	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACATGAGGGAAAGCTTGT	-34	True	NA	NA	False	AATAAA	-19	NA	123741683	123723927	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_123726992_123727475_123727596_123728132_123728263_123729125_123729215_123729614_123729826_123730486_123730986_123740116_123740537_123741548
H1_mix_00016636	chr11	-	6519	4	NIC	ENSG00000120458.13	novel	2384	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	27	junction_3	55.2509426767242	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAATTAAAGTA	-8	True	NA	NA	False	TTTAAA	-10	NA	124800406	124766527	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_124768029_124772993_124773055_124774718_124779140_124799870
H1_mix_00016639	chr11	-	1242	5	NIC	ENSG00000150433.10	novel	954	5	NA	NA	-6	-9	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	51.4799718337141	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATAGCTAAAGGGCTGAC	14	True	NA	-30	True	AATAAA	-8	NA	125111714	125097043	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_125097741_125101200_125101257_125102131_125102318_125102636_125102810_125111584
H1_mix_00016651	chr11	-	5130	10	NNC	ENSG00000134954.14	novel	5139	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_9	24.5583206085252	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGGCTTTGGCTTGAT	0	True	NA	-7	True	ATTAAA	-22	NA	128587558	128458764	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_128462577_128463508_128463628_128480190_128480452_128484822_128485072_128486068_128486147_128489289_128489491_128490456_128490577_128556290_128556436_128573061_128573145_128587496
H1_mix_00016652	chr11	-	1864	9	NIC	ENSG00000134954.14	novel	5139	10	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_2	27.6108561076979	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTCTTAAAAATCGT	59	False	NA	-30	True	ATTAAA	-14	NA	128587545	128461765	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_128462577_128463508_128463628_128484822_128485072_128486068_128486147_128489289_128489491_128490456_128490577_128556290_128556436_128573061_128573145_128587487
H1_mix_00016671	chr11	-	6160	4	FSM	ENSG00000109956.13	ENST00000531778.1	6160	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1.4142135623731	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTTCAGCCCTGCCTTA	585	False	NA	-8	True	ATTAAA	-29	NA	134387197	134378503	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_134380748_134381923_134382025_134382709_134383007_134383679
H1_mix_00016672	chr11	+	288	1	Intergenic	novelGene_218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATCTACAGTGTTCTTTAC	NA	False	NA	NA	False	NA	NA	NA	5009557	5009845	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_5009600_5009800
H1_mix_00016673	chr11	+	308	1	Intergenic	novelGene_224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACATGTATGAGTAGTTG	6586	False	NA	NA	False	AAAACA	-28	NA	7912790	7913098	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_7912800_7913100
H1_mix_00016675	chr11	+	372	1	Intergenic	novelGene_235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTCCCAGTAGTGAATAA	NA	False	NA	NA	False	NA	NA	NA	24771398	24771770	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_24771400_24771800
H1_mix_00016677	chr11	+	315	1	Intergenic	novelGene_244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTATTCTTTTAATTACC	NA	False	NA	NA	False	NA	NA	NA	62170963	62171278	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_62171000_62171300
H1_mix_00016679	chr11	+	3951	1	Intergenic	novelGene_253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCGGAGGTTGCAGTGAGC	NA	False	NA	NA	False	NA	NA	NA	76499277	76503228	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_76499300_76503200
H1_mix_00016680	chr11	+	1169	1	Intergenic	novelGene_254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCCAAGAAGAACGTAGAC	NA	False	NA	NA	False	NA	NA	NA	77771702	77772871	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_77771700_77772900
H1_mix_00016681	chr11	+	1825	1	Intergenic	novelGene_255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATTAGGGGTAAAAA	NA	False	NA	NA	False	NA	NA	NA	77786345	77788170	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_77786300_77788200
H1_mix_00016682	chr11	+	2012	1	Intergenic	novelGene_256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGGAGAGGAGAGAAGCTT	NA	False	NA	NA	False	AATAAA	-28	NA	93681431	93683443	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_93681400_93683400
H1_mix_00016683	chr11	+	220	1	Intergenic	novelGene_257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTAGCCTAGCCCTCA	NA	False	NA	NA	False	NA	NA	NA	94349113	94349333	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_94349100_94349300
H1_mix_00016684	chr11	+	219	1	Intergenic	novelGene_258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCACGACTGGCAAATTAG	NA	False	NA	NA	False	NA	NA	NA	94349701	94349920	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_94349700_94349900
H1_mix_00016686	chr11	+	1632	12	FSM	ENSG00000185627.19	ENST00000525665.5	1632	12	0	0	0	0	multi-exon	FALSE	canonical	3	886	junction_9	85.8082621385591	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTCTGCTTTGTTCTTCT	12	True	NA	7	True	AATAAA	-1	NA	236999	252966	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_237145_238997_239077_244040_244217_244425_244470_244674_244762_247276_247449_248775_248856_248931_249058_250802_250866_251545_251627_251819_251937_252504
H1_mix_00016688	chr11	+	1012	1	Genic_Genomic	ENSG00000255026.1	novel	NA	NA	NA	NA	0	62	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCAGCGACCGCCCCCGC	26	False	NA	NA	False	NA	NA	NA	288037	289049	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr11_+_288000_289000
H1_mix_00016689	chr11	+	5159	8	NIC	ENSG00000142102.16	novel	4418	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	216	junction_1	41.0485029183372	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTCTGAGGAGCCGCTG	1	True	NA	20	True	ATTAAA	-24	NA	289125	295678	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_290076_290389_292096_292545_292678_292885_293728_293829_293926_294098_294197_294266_294479_294555
H1_mix_00016690	chr11	+	3390	13	NNC	ENSG00000142102.16	novel	3699	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	23	junction_11	86.3205830353083	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTCTGAGGAGCCGCTG	1	True	NA	20	True	ATTAAA	-24	NA	289125	295678	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_289240_289794_290076_290389_290601_290677_291114_291975_292096_292545_292678_292885_293236_293365_293503_293593_293728_293829_293926_294098_294197_294320_294479_294555
H1_mix_00016693	chr11	+	634	3	FSM	ENSG00000185201.18	ENST00000527146.1	634	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	53.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTGCTGTGACTTCACC	97	False	NA	29	True	AATAAA	-15	NA	308319	309392	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_308439_308754_308890_309012
H1_mix_00016695	chr11	+	235	3	FSM	ENSG00000174915.12	ENST00000530087.1	596	3	0	361	0	-361	multi-exon	TRUE	canonical	1	1	junction_2	128	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCACCCAGGATCATGCGG	NA	False	NA	NA	False	NA	NA	NA	473919	480233	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_473978_479084_479153_480124
H1_mix_00016696	chr11	+	580	2	FSM	ENSG00000288033.1	ENST00000670787.1	944	2	0	364	0	-364	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTCTGTGTAGAAAGAAG	5512	False	NA	NA	False	AAGAAA	-43	NA	512512	517770	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_512537_517214
H1_mix_00016697	chr11	+	1762	4	FSM	ENSG00000099849.15	ENST00000431809.5	1745	4	-17	0	-17	0	multi-exon	FALSE	canonical	1	18	junction_1	216.195898820183	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCTCAATAAACTGCCC	899	False	NA	-5	True	NA	NA	NA	560386	563993	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_560515_561761_561893_562078_562777_563188
H1_mix_00016698	chr11	+	5821	18	NIC	ENSG00000070047.13	novel	5539	18	NA	NA	-285	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_2	59.469279091892	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTTGTGCTCTTGTAAA	4443	False	NA	11	True	NA	NA	NA	576184	612222	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_576593_581491_581607_581964_582082_587258_587465_591383_591468_592558_592675_596922_597021_597394_597571_598372_598503_601573_601702_605118_605301_605604_605725_606441_606597_607065_609721_610195_610348_610500_610762_610953_611083_611633
H1_mix_00016699	chr11	+	711	1	Genic_Genomic	ENSG00000255158.1	novel	NA	NA	NA	NA	-487	-12258	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGCAGATCCAAGACTAAGGA	NA	False	NA	NA	False	AAAACA	-39	NA	665422	666133	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr11_+_665400_666100
H1_mix_00016700	chr11	+	3263	22	NIC	ENSG00000177106.17	novel	3266	22	NA	NA	0	0	intron_retention	TRUE	canonical	3	10	junction_1	62.7515707945882	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGAGCCGTGTGTCTCAG	909	False	NA	14	True	ATTAAA	-14	NA	706119	727721	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_706289_706673_706802_709329_709452_709552_709609_710421_710487_720061_720224_720596_720747_720829_720910_721063_721207_721284_721353_721564_721692_721902_721992_722090_722166_722400_722550_722672_722806_723240_723354_724723_724830_725727_725848_726097_726171_726303_726485_726618_726752_726900
H1_mix_00016701	chr11	+	2233	13	FSM	ENSG00000177106.17	ENST00000528770.5	2233	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	75.5154049773216	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGCCGTGTGTCTCAGTT	424	False	NA	16	True	ATTAAA	-16	NA	721074	727723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_721207_721284_721353_721564_721692_722090_722166_722400_722550_722672_722806_723240_723354_724723_724830_725727_725848_726097_726171_726303_726485_726618_726752_726900
H1_mix_00016703	chr11	+	3843	2	NNC	ENSG00000255284.3	novel	610	4	NA	NA	0	-2426	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCAGACAGGGCCCTTTC	18	True	NA	NA	False	NA	NA	NA	777607	781871	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_777696_778116
H1_mix_00016706	chr11	+	2726	6	FSM	ENSG00000177666.17	ENST00000525250.5	2726	6	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_3	12.8840987267251	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCCCACTTTGTGTGTA	558	False	NA	19	True	AATAAA	-15	NA	820834	825219	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_821861_821957_822024_822396_822607_823526_824131_824313_824437_824522
H1_mix_00016707	chr11	+	3087	8	NIC	ENSG00000177685.17	novel	2166	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	54	junction_2	82.5642606874012	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCGTCCTCCTGGGCCTT	1121	False	NA	13	True	AATAAA	-14	NA	827279	831985	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_828773_828851_828964_829359_829541_829985_830133_830249_830714_830865_831033_831223_831296_831534
H1_mix_00016708	chr11	+	1977	10	NIC	ENSG00000177685.17	novel	2166	9	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	81.5617617983717	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGTCCTCCTGGGCCTTC	2	True	NA	14	True	AATAAA	-15	NA	827307	831986	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_827460_828259_828773_828851_828964_829359_829541_829985_830133_830249_830338_830620_830714_830865_831033_831223_831296_831534
H1_mix_00016709	chr11	+	2002	10	NIC	ENSG00000177685.17	novel	2166	9	NA	NA	17	0	intron_retention	FALSE	canonical	3	25	junction_1	81.1076102745263	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGTCCTCCTGGGCCTTC	7	True	NA	14	True	AATAAA	-15	NA	827312	831986	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_827460_828229_828773_828851_828964_829359_829541_829985_830133_830249_830338_830620_830714_830865_831033_831223_831296_831534
H1_mix_00016710	chr11	+	1067	3	NIC	ENSG00000177685.17	novel	714	4	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	146	junction_1	75.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGCGTCCTCCTGGGCCT	28	False	NA	12	True	AATAAA	-13	NA	830487	831984	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_831033_831223_831296_831534
H1_mix_00016711	chr11	+	1430	10	FSM	ENSG00000177697.19	ENST00000530726.5	1407	10	-23	0	0	0	multi-exon	FALSE	canonical	2	11	junction_9	204.902144666397	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACGAGCTCGCTGTGCTG	16	True	NA	24	True	AATAAA	-16	NA	832985	838831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_833023_834529_834592_836062_836154_836250_836443_836768_836844_837249_837355_837459_837619_837941_838029_838132_838368_838444
H1_mix_00016712	chr11	+	1422	9	FSM	ENSG00000214063.12	ENST00000397406.5	1426	9	0	4	0	1	multi-exon	FALSE	canonical	3	20	junction_1	211.261353245216	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCGTCTATTGCTCGTCT	-32	True	NA	15	True	AATAAA	-15	NA	844080	867112	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_844187_847200_847301_850287_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
H1_mix_00016714	chr11	+	2187	4	FSM	ENSG00000214063.12	ENST00000494815.1	2187	4	0	0	0	0	multi-exon	FALSE	canonical	3	645	junction_3	19.7709101684492	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGCGTCTATTGCTCGTC	3149	False	NA	14	True	AATAAA	-14	NA	863271	867111	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_864512_865512_865826_865917_866002_866561
H1_mix_00016715	chr11	+	3334	22	NIC	ENSG00000174672.16	novel	3211	21	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_13	19.4608741731395	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCCTGCAAGATATTTT	NA	False	NA	-19	True	TTTAAA	-1	NA	1389843	1461714	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_1390376_1436039_1436135_1438305_1438392_1440787_1440929_1442489_1442607_1443105_1443140_1443334_1443404_1443488_1443636_1444970_1445003_1445293_1445459_1445570_1445669_1445756_1445908_1447797_1447864_1449775_1449837_1450586_1450795_1451370_1451420_1454484_1454609_1456347_1456529_1456597_1456688_1456954_1457050_1459191_1459240_1460969
H1_mix_00016716	chr11	+	4148	22	NNC	ENSG00000174672.16	novel	3211	21	NA	NA	-55	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_21	28.0321325181432	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTCTTGGTGGTTT	NA	False	NA	7	True	TATAAA	-1	NA	1389843	1461740	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_1390376_1436039_1436135_1438305_1438392_1440787_1440929_1442489_1442607_1443105_1443140_1443334_1443404_1443488_1443636_1444970_1445003_1445293_1445459_1445570_1445669_1445756_1445908_1447797_1447864_1449775_1449837_1450220_1450795_1451370_1451420_1454484_1454609_1456347_1456529_1456597_1456688_1456954_1457050_1459191_1459240_1460547
H1_mix_00016717	chr11	+	2647	5	NIC	ENSG00000223756.8	novel	1244	4	NA	NA	0	1348	combination_of_known_splicesites	FALSE	canonical	3	47	junction_1	14.1840579525043	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTACATCATCACTTGTACA	32	False	NA	NA	False	NA	NA	NA	3380992	3399438	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_3381045_3383461_3383547_3384166_3384285_3384898_3384969_3397116
H1_mix_00016718	chr11	+	1488	6	FSM	ENSG00000148985.20	ENST00000477358.6	1474	6	-14	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	110.588607008136	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTGAAAGGAAAATAAATT	-20	True	NA	-17	True	NA	NA	NA	3797897	3826317	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_3797983_3808293_3808316_3811249_3811425_3824269_3824377_3825019_3825129_3825327
H1_mix_00016719	chr11	+	812	6	FSM	ENSG00000148985.20	ENST00000490830.5	810	6	-2	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	118.981679261977	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGATACCATTCTGGCCTT	5	True	NA	NA	False	AAGAAA	-1	NA	3797922	3825509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_3797983_3808293_3808316_3823882_3824136_3824269_3824456_3825019_3825129_3825327
H1_mix_00016720	chr11	+	769	6	FSM	ENSG00000148985.20	ENST00000475884.5	745	6	-24	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	106.230692363365	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATATGGGCGTGGGGTCC	5	True	NA	NA	False	NA	NA	NA	3797922	3825635	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_3797983_3808293_3808316_3811249_3811425_3824269_3824365_3825019_3825129_3825327
H1_mix_00016721	chr11	+	1824	6	NIC	ENSG00000148985.20	novel	931	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_4	94.527456328836	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTGAAAGGAAAATAAATT	-27	True	NA	-17	True	NA	NA	NA	3808540	3826317	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_3808652_3811249_3811425_3823882_3824136_3824269_3824456_3825019_3825129_3825327
H1_mix_00016722	chr11	+	1523	5	NIC	ENSG00000148985.20	novel	894	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_3	91.4248325128354	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTGAAAGGAAAATAAATT	8	True	NA	-17	True	NA	NA	NA	3808575	3826317	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_3808652_3823882_3824136_3824269_3824365_3825019_3825129_3825327
H1_mix_00016723	chr11	+	2106	5	ISM	ENSG00000148985.20	ENST00000479072.5	894	6	14488	-739	-538	0	3prime_fragment	FALSE	canonical	3	23	junction_1	107.077950578072	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTGAAAGGAAAATAAATT	5659	False	NA	-17	True	NA	NA	NA	3823081	3826317	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_3823741_3823882_3824136_3824269_3824365_3825019_3825129_3825327
H1_mix_00016724	chr11	+	2202	3	ISM	ENSG00000148985.20	ENST00000475884.5	745	6	25350	-717	-323	0	3prime_fragment	FALSE	canonical	3	67	junction_1	110	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGCCTAGGCTTGCTAG	5874	False	NA	18	True	AATAAA	-18	NA	3823296	3826352	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_3824365_3825019_3825129_3825327
H1_mix_00016725	chr11	+	239	1	FSM	ENSG00000236248.1	ENST00000445629.1	235	1	-7	3	-7	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTGCCCAAGAGTAACAA	5	True	NA	NA	False	NA	NA	NA	5362607	5362846	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_5362600_5362800
H1_mix_00016727	chr11	+	1002	7	FSM	ENSG00000132274.16	ENST00000454828.5	1002	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	56.9151415120206	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTCTGCTTTTGGTGTC	52	False	NA	NA	False	NA	NA	NA	5689879	5709163	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_5689900_5696166_5696656_5698314_5698546_5706593_5706617_5708172_5708274_5708576_5708604_5709052
H1_mix_00016728	chr11	+	1152	1	FSM	ENSG00000180919.3	ENST00000316529.3	1152	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATGGCCAATAAAAT	NA	False	NA	NA	False	AATAGA	-37	NA	6107683	6108835	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_6107700_6108800
H1_mix_00016730	chr11	+	609	4	FSM	ENSG00000179532.13	ENST00000526027.1	1064	4	0	455	0	247	multi-exon	FALSE	canonical	0	0	junction_3	1.63299316185545	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGAAGGGTGGAGCACAA	NA	False	NA	NA	False	NA	NA	NA	6558933	6563564	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_6559107_6559180_6559284_6562981_6563132_6563381
H1_mix_00016731	chr11	+	1452	5	FSM	ENSG00000149054.16	ENST00000529755.1	1452	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	28.3813318926368	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGAATGTTATCAATGTG	21	True	NA	NA	False	AAAAAG	-19	NA	6926462	6956110	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_6926686_6927661_6927808_6932093_6932673_6941570_6941654_6955689
H1_mix_00016732	chr11	+	3490	7	NIC	ENSG00000149054.16	novel	3655	7	NA	NA	41	-5	intron_retention	FALSE	canonical	1	5	junction_1	23.1210582226103	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAACTGTGTCTTCTGTAA	27	True	NA	11	True	ATTAAA	-21	NA	6926562	6957843	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_6926862_6927661_6927808_6932093_6932673_6941570_6941654_6943082_6943216_6943545_6943642_6955689
H1_mix_00016733	chr11	+	917	1	FSM	ENSG00000227892.1	ENST00000424698.1	917	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTGAATTAAATCAGTATA	NA	False	NA	NA	False	NA	NA	NA	7745989	7746906	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_7746000_7746900
H1_mix_00016734	chr11	+	2291	1	FSM	ENSG00000170688.4	ENST00000305754.2	927	1	-1399	35	-1399	-35	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGGATGCCCTGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	7847300	7849591	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_7847300_7849600
H1_mix_00016735	chr11	+	6713	7	FSM	ENSG00000175390.15	ENST00000678993.1	6713	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	918.757131491596	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTAAGGTACTAGATGG	0	True	NA	NA	False	AAGAAA	-15	NA	7987336	8001716	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_7987717_7992083_7992164_7992886_7993025_7994425_7994518_7994981_7995119_7995253_7995368_7995944
H1_mix_00016736	chr11	+	903	4	FSM	ENSG00000166441.13	ENST00000526562.5	519	4	-384	0	7	0	multi-exon	FALSE	canonical	0	0	junction_2	3230.08059754964	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGTGTGAGTGTAGGT	42	False	NA	29	True	ATTAAA	-17	NA	8682816	8685848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_8683266_8684005_8684082_8684685_8684893_8685677
H1_mix_00016737	chr11	+	297	3	FSM	ENSG00000166441.13	ENST00000525981.1	297	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	3596.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTGGTGTGAGTGTAGG	200	False	NA	28	True	ATTAAA	-16	NA	8683214	8685847	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_8683266_8684005_8684082_8685677
H1_mix_00016741	chr11	+	1780	6	ISM	ENSG00000166483.12	ENST00000450114.7	3588	11	39	8040	39	458	5prime_fragment	FALSE	canonical	3	610	junction_3	31.7364144162506	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCCATCCCGTGCTCAAG	32	True	NA	NA	False	NA	NA	NA	9573708	9581945	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_9574510_9575887_9576094_9576229_9576294_9576486_9576660_9577141_9577264_9581531
H1_mix_00016742	chr11	+	3420	11	FSM	ENSG00000166483.12	ENST00000299613.10	3436	11	16	0	16	0	multi-exon	TRUE	canonical	1	2	junction_1	206.708998352757	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATTTGTACTGAGTCACA	25	False	NA	NA	False	AATATA	-18	NA	9574702	9589984	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_9575376_9575887_9576094_9576229_9576294_9576486_9576660_9577141_9577264_9581531_9581679_9585257_9585354_9585441_9585528_9586448_9586620_9586710_9586857_9588448
H1_mix_00016743	chr11	+	1479	4	NNC	ENSG00000148926.10	novel	1492	4	NA	NA	-1	0	intron_retention	FALSE	canonical	3	22	junction_3	145.648740315718	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATTCTCTCGGCTCGGCT	8	True	NA	34	True	AATAAA	-16	NA	10305082	10307397	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_10305230_10305679_10305799_10305948_10306099_10306334
H1_mix_00016745	chr11	+	2234	6	ISM	ENSG00000133805.16	ENST00000529834.5	2248	15	41256	-1314	-1738	108	3prime_fragment	FALSE	canonical	1	1	junction_4	5.32916503778969	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAATTTCTTTTGGCAACT	NA	False	NA	8	True	AATAAA	-19	NA	10496662	10507126	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_10496939_10500085_10500250_10501469_10501591_10502720_10502895_10504579_10504660_10505707
H1_mix_00016746	chr11	+	552	3	FSM	ENSG00000177112.9	ENST00000663840.1	643	3	74	17	35	4	multi-exon	FALSE	canonical	0	0	junction_1	1	1107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTATAAACTTACCAATGA	-4	True	NA	NA	False	AATAAA	-17	NA	10541331	10599919	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_10541543_10594116_10594229_10599690
H1_mix_00016747	chr11	+	4178	24	NIC	ENSG00000198730.9	novel	4330	25	NA	NA	44	0	combination_of_known_junctions	TRUE	canonical	3	28	junction_6	50.4164509413331	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGGTAACTTCGTGTCTT	14	False	NA	10	True	AATAAA	-18	NA	10751289	10779746	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_10751458_10752671_10752771_10754957_10755198_10755677_10755796_10756748_10756839_10760172_10760322_10763430_10763539_10763642_10763880_10764111_10764202_10764307_10764437_10764547_10764732_10766401_10766491_10767805_10767992_10768073_10768162_10768342_10768492_10770209_10770327_10770486_10770633_10771544_10771617_10772519_10772656_10773126_10773274_10774011_10774170_10775206_10775304_10775520_10775634_10778678
H1_mix_00016748	chr11	+	4371	5	NIC	ENSG00000133816.18	novel	3903	28	NA	NA	85	0	intron_retention	TRUE	canonical	1	1	junction_1	3.34477204006491	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCATTGTTTCCTCTCTTC	61	False	NA	NA	False	AATAAA	-17	NA	12239544	12263785	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_12239586_12249183_12249247_12256784_12256972_12258467_12258557_12259794
H1_mix_00016749	chr11	+	345	3	FSM	ENSG00000133816.18	ENST00000529028.1	482	3	2	135	2	-135	multi-exon	FALSE	canonical	1	2	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGGGTGGGAGGCTGGG	NA	False	NA	NA	False	NA	NA	NA	12276081	12287179	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_12276167_12280932_12281100_12287086
H1_mix_00016750	chr11	+	8858	11	NIC	ENSG00000187079.20	novel	9417	13	NA	NA	75	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_4	16.152089648092	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTTTATCTGCAGAAGT	131	False	NA	19	True	AATAAA	-21	NA	12674691	12944737	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_12674835_12764178_12764435_12862249_12862315_12864837_12864901_12881004_12881052_12881895_12881958_12883000_12883126_12901939_12902114_12924911_12925053_12930173_12930327_12937108
H1_mix_00016751	chr11	+	367	1	FSM	ENSG00000287548.1	ENST00000661088.1	1341	1	13	961	13	-961	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGAAACTCCTTCAGTT	NA	False	NA	NA	False	TTTAAA	-27	NA	13463389	13463756	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_13463400_13463800
H1_mix_00016752	chr11	+	812	4	NIC	ENSG00000254946.2	novel	743	3	NA	NA	-69	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	12.3558353285671	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGAGGAAGGAATGGTTA	13	False	NA	NA	False	AATAAA	-20	NA	15552785	15604169	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_15552914_15561877_15562229_15585707_15585803_15603931
H1_mix_00016753	chr11	+	873	1	FSM	ENSG00000197149.5	ENST00000494359.1	873	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTTTTTATACAAGAAAAAT	3199	False	NA	NA	False	NA	NA	NA	17228278	17229151	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_17228300_17229200
H1_mix_00016754	chr11	+	1642	15	NNC	ENSG00000070081.18	novel	2300	14	NA	NA	0	427	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	108.905243403687	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGTTCAAATAGACATGA	10	True	NA	NA	False	NA	NA	NA	17276738	17350407	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_17276829_17282788_17282944_17295323_17295468_17296103_17296212_17301743_17301871_17309571_17309676_17310824_17311011_17311192_17311284_17311871_17311931_17312027_17312121_17315385_17315476_17330126_17330298_17330901_17330984_17331411_17331520_17350373
H1_mix_00016755	chr11	+	1660	15	NIC	ENSG00000070081.18	novel	2300	14	NA	NA	32	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_3	128.65372366257	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAAATAAAGGGAGATAC	0	True	NA	NA	False	AATAAA	-16	NA	17276772	17331525	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_17276829_17282788_17282944_17286633_17286714_17295323_17295468_17296103_17296212_17301743_17301871_17309571_17309676_17310824_17311011_17311192_17311284_17311871_17311931_17312027_17312121_17315385_17315476_17330126_17330298_17330901_17330984_17331411
H1_mix_00016756	chr11	+	532	2	FSM	ENSG00000110768.12	ENST00000526461.1	568	2	12	24	-2	-24	multi-exon	FALSE	canonical	3	147	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATCTACCTGACATATA	9	True	NA	NA	False	NA	NA	NA	18322579	18333430	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_18322741_18333059
H1_mix_00016757	chr11	+	2141	9	ISM	ENSG00000110768.12	ENST00000418116.6	1822	14	23	11939	-2	0	5prime_fragment	FALSE	canonical	3	112	junction_5	17.6984286025624	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTAATTTCTTTCATTTA	9	True	NA	3	True	AATAAA	-15	NA	18322579	18348831	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_18322741_18333059_18333229_18335753_18335947_18338108_18338275_18339563_18339658_18341260_18341411_18341527_18341608_18347587_18347716_18347831
H1_mix_00016758	chr11	+	1227	8	FSM	ENSG00000110768.12	ENST00000530496.6	1700	8	473	0	473	0	multi-exon	FALSE	canonical	3	84	junction_7	16.7965010933704	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTCGTTTTTTTCTGTGT	7932	False	NA	29	True	GATAAA	-16	NA	18347576	18366275	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_18347716_18347831_18347920_18351880_18351970_18352328_18352447_18357951_18358043_18358524_18358641_18360614_18360708_18365782
H1_mix_00016760	chr11	+	1092	7	FSM	ENSG00000166796.12	ENST00000396215.7	1092	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	7.06320670013903	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATAACTCTAGTCTCTC	-9	True	NA	NA	False	AATAAA	-18	NA	18412322	18451243	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_18412409_18412708_18412844_18429736_18429911_18434739_18434914_18438527_18438646_18446209_18446334_18450962
H1_mix_00016761	chr11	+	429	3	ISM	ENSG00000166796.12	ENST00000541669.6	2035	8	8	36669	3	-35733	5prime_fragment	FALSE	canonical	3	14	junction_2	4.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCATGCCATTGGGCCAT	-6	True	NA	NA	False	AATAAA	-41	NA	18412325	18415394	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_18412409_18412708_18412844_18415183
H1_mix_00016762	chr11	+	813	5	FSM	ENSG00000166796.12	ENST00000545848.5	813	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	9.41740410091868	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATAACTCTAGTCTCTC	28	True	NA	NA	False	AATAAA	-18	NA	18412359	18451243	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_18412409_18412708_18412844_18429736_18429911_18434739_18434914_18450962
H1_mix_00016763	chr11	+	376	1	FSM	ENSG00000257043.1	ENST00000537438.1	499	1	266	-143	266	143	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAATCAGTGACACAGAGG	NA	False	NA	NA	False	NA	NA	NA	18665315	18665691	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_18665300_18665700
H1_mix_00016764	chr11	+	11367	36	NIC	ENSG00000166833.23	novel	11492	38	NA	NA	14	0	intron_retention	FALSE	canonical	0	0	junction_1	16.4837582399854	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTGGTTTGGCTTGTCTG	16	False	NA	21	True	AATAAA	-22	NA	19712850	20121601	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_19713963_19832483_19832602_19842870_19842924_19868924_19868998_19879868_19880128_19892433_19892595_19933175_19934278_19939660_19939774_19946400_19946510_19948690_19949081_19984124_19984248_20035958_20036098_20043980_20044273_20044967_20045671_20048727_20049196_20054079_20054241_20055768_20055958_20062306_20062360_20068185_20068210_20068323_20068399_20077551_20077636_20077992_20078105_20080063_20080210_20083006_20083180_20090864_20091019_20092205_20092369_20093098_20093200_20095671_20095768_20097576_20097746_20100936_20101173_20103254_20103410_20103652_20103725_20105530_20105728_20107663_20107783_20114591_20114796_20118132
H1_mix_00016765	chr11	+	6747	21	FSM	ENSG00000171714.13	ENST00000684663.1	6947	21	-12	212	0	-2	multi-exon	FALSE	canonical	3	14	junction_2	6.82110694828926	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTGACATGAACTCAAT	-27	True	NA	7	True	AATAAA	-18	NA	22193032	22283355	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_22193533_22203803_22203851_22211266_22211315_22221096_22221211_22225983_22226053_22227301_22227587_22236162_22236277_22239568_22239685_22250236_22250372_22250740_22250847_22250950_22251012_22255370_22255523_22257679_22257755_22259518_22259742_22262128_22262299_22262945_22263044_22270311_22270443_22272783_22272990_22274568_22274748_22276093_22276200_22279543
H1_mix_00016767	chr11	+	3660	12	FSM	ENSG00000091664.9	ENST00000263160.4	3665	12	3	2	3	-2	multi-exon	FALSE	canonical	0	0	junction_7	1.02851895445316	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAGTGCATTAATCATAC	6	True	NA	10	True	AATAAA	-26	NA	22338383	22379501	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_22338620_22341527_22341781_22343246_22343366_22359412_22359528_22360896_22360985_22362738_22362826_22365546_22365690_22370038_22370189_22374754_22374888_22375981_22376093_22376544_22376673_22377404
H1_mix_00016768	chr11	+	605	4	FSM	ENSG00000246225.7	ENST00000528701.6	2800	4	21	2174	11	-2174	multi-exon	FALSE	canonical	0	0	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGCTGGCTTCTTTTAC	15	False	NA	NA	False	NA	NA	NA	22829432	22920649	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_22829612_22834906_22835065_22838228_22838365_22920517
H1_mix_00016769	chr11	+	4736	2	NNC	ENSG00000246225.7	novel	2800	4	NA	NA	91774	162671	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTATTCTTTTGAGATT	NA	False	NA	16	True	AATAAA	-17	NA	22921227	23108064	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_22921254_23103354
H1_mix_00016770	chr11	+	3257	4	NNC	ENSG00000255418.6	novel	732	6	NA	NA	-3877	-4210	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	6.54896090146283	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTCAACTTGGTTGGAT	NA	False	NA	64	True	NA	NA	NA	23150805	23162576	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_23150841_23154683_23154794_23155210_23155404_23159657
H1_mix_00016771	chr11	+	3269	12	NNC	ENSG00000255418.6	novel	807	7	NA	NA	-3877	1150	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	5.85217343252039	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTGCTTTTGTCATATA	NA	False	NA	7	True	AATAAA	-16	NA	23150805	23204311	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_23150841_23154683_23154794_23155210_23155404_23159657_23159697_23163495_23163603_23165189_23165334_23166492_23166614_23166735_23166793_23183399_23183475_23191068_23192085_23192345_23192404_23202997
H1_mix_00016772	chr11	+	225	1	Intergenic	novelGene_232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGTGCAAGTGACAGGGGA	NA	False	NA	NA	False	NA	NA	NA	23184106	23184331	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_23184100_23184300
H1_mix_00016773	chr11	+	343	1	Intergenic	novelGene_234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGGCATATATACGTGC	NA	False	NA	NA	False	NA	NA	NA	23189334	23189677	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_23189300_23189700
H1_mix_00016774	chr11	+	2168	5	FSM	ENSG00000170946.15	ENST00000526042.5	2192	5	-17	41	0	-41	multi-exon	FALSE	canonical	1	3	junction_3	42.7492689995981	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTGAGAACAGATTGTGA	-17	True	NA	NA	False	NA	NA	NA	31369839	31427937	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_31369913_31370715_31370860_31414810_31414950_31421971_31422133_31426286
H1_mix_00016775	chr11	+	2436	2	FSM	ENSG00000109911.19	ENST00000638764.1	2456	2	-4	24	1	-24	multi-exon	FALSE	canonical	1	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTAAAATTGTTTAAATT	-9	True	NA	NA	False	NA	NA	NA	31509762	31512560	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_31510008_31510369
H1_mix_00016776	chr11	+	1662	6	FSM	ENSG00000149100.13	ENST00000524711.5	1645	6	-17	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	1069.97857922484	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTGGAGCTGATGATGTT	-4	True	NA	NA	False	NA	NA	NA	32583830	32600793	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_32583930_32587011_32587145_32589546_32589642_32593865_32595014_32595965_32596048_32600688
H1_mix_00016777	chr11	+	1201	2	FSM	ENSG00000121690.11	ENST00000427755.2	1212	2	11	0	9	0	multi-exon	FALSE	canonical	3	77	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGCCTCCCAGTAGCTGG	-11	True	NA	NA	False	NA	NA	NA	33015886	33026717	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_33016029_33025658
H1_mix_00016778	chr11	+	686	4	FSM	ENSG00000176148.16	ENST00000602733.5	747	4	61	0	61	0	multi-exon	FALSE	canonical	2	2	junction_1	33.5095342982992	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTACATAAAGCGTTTTG	68	False	NA	NA	False	AGTAAA	-5	NA	33039862	33057136	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_33040207_33043749_33043937_33054592_33054726_33057114
H1_mix_00016779	chr11	+	2266	18	FSM	ENSG00000135387.21	ENST00000529307.1	2266	18	0	0	0	0	multi-exon	FALSE	canonical	1	33	junction_1	295.257309634721	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTCAGCTTTCTATTAC	9	False	NA	17	True	CATAAA	-12	NA	34052980	34099514	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_34053186_34071725_34071789_34071900_34071988_34076235_34076475_34076559_34076643_34079627_34079766_34082824_34082878_34082954_34083042_34086063_34086220_34086304_34086414_34089394_34089457_34090178_34090290_34090528_34090679_34091905_34092057_34096478_34096674_34097195_34097297_34097697_34097762_34099302
H1_mix_00016780	chr11	+	696	3	FSM	ENSG00000135372.10	ENST00000532503.5	556	3	-140	0	-140	0	multi-exon	FALSE	canonical	1	1	junction_1	3	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATCAGGTATGGCCTG	5294	False	NA	NA	False	NA	NA	NA	34105476	34108323	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_34105793_34107052_34107320_34108210
H1_mix_00016781	chr11	+	1917	5	ISM	ENSG00000121691.7	ENST00000241052.5	2291	13	21550	5	-249	-5	3prime_fragment	FALSE	canonical	3	162	junction_1	6.18465843842649	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAGAGATGGTATTTTCT	NA	False	NA	5	True	AATAAA	-15	NA	34460483	34472055	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_34461390_34464104_34464236_34468287_34468396_34470957_34471042_34471367
H1_mix_00016782	chr11	+	583	2	FSM	ENSG00000135362.14	ENST00000530252.1	577	2	-6	0	-5	0	multi-exon	FALSE	canonical	1	4	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGCCTGGAACAGGTGAA	-3	True	NA	NA	False	NA	NA	NA	36376395	36401270	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_36376705_36400996
H1_mix_00016783	chr11	+	1093	7	FSM	ENSG00000166352.18	ENST00000530697.6	1084	7	-9	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	125.485390915968	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTTTGTGGAAATTTAC	11	True	NA	17	True	AATAAA	-18	NA	36594530	36659272	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_36594762_36597643_36597731_36610080_36610240_36633283_36633439_36636050_36636118_36648015_36648156_36659018
H1_mix_00016784	chr11	+	5582	3	FSM	ENSG00000166181.13	ENST00000529334.1	346	3	0	-5236	0	80	multi-exon	FALSE	canonical	3	56	junction_2	826	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCCAATAGGCTGAAAATAT	NA	False	NA	98	True	NA	NA	NA	43335278	43344609	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_43335355_43335857_43335995_43339240
H1_mix_00016785	chr11	+	4782	26	NNC	ENSG00000052841.15	novel	4488	24	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	212.598603946498	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTCTGTCATGTGATTTT	8	True	NA	17	True	AATAAA	-18	NA	43358956	43494931	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_43359114_43373509_43373670_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43396708_43396819_43397346_43397492_43397973_43398114_43399887_43400049_43401445_43401559_43403997_43404145_43405513_43405630_43405785_43405952_43407137_43407216_43407352_43407578_43414589_43414777_43436163_43436335_43443324_43443585_43444055_43444210_43448001_43448123_43450081_43450242_43451181_43451266_43490238_43490359_43492019_43492164_43493772
H1_mix_00016787	chr11	+	338	1	FSM	ENSG00000254463.1	ENST00000529659.1	480	1	-22	164	-22	-164	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCCAGTTTTTCATCTGC	NA	False	NA	NA	False	AAAACA	-5	NA	43466369	43466707	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_43466400_43466700
H1_mix_00016788	chr11	+	896	1	FSM	ENSG00000283483.1	ENST00000637880.1	804	1	51	-143	51	143	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCACTTCAGAAACCCCATC	109	False	NA	NA	False	AATAAA	-7	NA	43733811	43734707	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_43733800_43734700
H1_mix_00016789	chr11	+	4106	2	FSM	ENSG00000149084.13	ENST00000525736.1	4292	2	186	0	186	0	multi-exon	FALSE	canonical	3	997	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTTTGCCCTTTTTTCC	NA	False	NA	26	True	AATAAA	-45	NA	43852232	43856617	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_43854865_43855143
H1_mix_00016790	chr11	+	913	2	FSM	ENSG00000110455.14	ENST00000531505.1	913	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGTGGGGCTGGCTTCTTC	4957	False	NA	NA	False	NA	NA	NA	44080509	44083270	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_44081321_44083168
H1_mix_00016791	chr11	+	3279	4	FSM	ENSG00000151348.16	ENST00000684437.1	3631	4	352	0	352	0	multi-exon	FALSE	canonical	3	235	junction_1	22.7596133534821	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTACTAATACTGCACAT	NA	False	NA	4	True	ATTAAA	-7	NA	44230694	44245413	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_44232497_44234114_44234244_44236292_44236376_44244148
H1_mix_00016793	chr11	+	3407	31	NIC	ENSG00000149091.15	novel	3512	31	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	120.628999645838	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGCTTTTCTTCTTTT	3	True	NA	28	True	AGTAAA	-16	NA	46345408	46380551	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_46345586_46367290_46367400_46367651_46367748_46368004_46368080_46369493_46369551_46369940_46370010_46371312_46371385_46371486_46371604_46371703_46371776_46372074_46372171_46372427_46372511_46372616_46372678_46372770_46372885_46372960_46373102_46374156_46374236_46374398_46374455_46374603_46374667_46374765_46374840_46374933_46375046_46375431_46375632_46375850_46375952_46376065_46376146_46376327_46376398_46376523_46376565_46377072_46377213_46378197_46378230_46378456_46378501_46378990_46379112_46379202_46379237_46379468_46379569_46379830
H1_mix_00016794	chr11	+	2751	25	ISM	ENSG00000149091.15	ENST00000421244.6	2862	31	-199	2597	-74	0	5prime_fragment	FALSE	canonical	3	379	junction_3	52.1260324971016	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCTTCAGCCCTGTGGTT	32	False	NA	NA	False	ACTAAA	-36	NA	46347388	46377350	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_46347821_46367290_46367400_46367651_46367748_46368001_46368080_46369493_46369551_46369940_46370010_46371312_46371385_46371486_46371604_46371703_46371776_46372074_46372171_46372427_46372511_46372616_46372678_46372770_46372885_46372960_46373102_46374156_46374236_46374398_46374455_46374603_46374667_46374765_46374840_46374933_46375046_46375431_46375632_46375850_46375952_46376065_46376146_46376327_46376398_46376523_46376565_46377072
H1_mix_00016796	chr11	+	4048	30	NIC	ENSG00000149091.15	novel	3482	31	NA	NA	0	0	intron_retention	FALSE	canonical	1	4	junction_28	123.756358008159	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGGGCCTCACCTGTTCC	26	False	NA	NA	False	NA	NA	NA	46347571	46380120	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_46347821_46367290_46367400_46367651_46367748_46368004_46368080_46369493_46369551_46369940_46370010_46371312_46371385_46371486_46371604_46371703_46371776_46372074_46372171_46372427_46372511_46372616_46372678_46372770_46372885_46372960_46373102_46374156_46374236_46374398_46374455_46374603_46374667_46374765_46374840_46374933_46375046_46375431_46375632_46375850_46375952_46376065_46376146_46376327_46376398_46376523_46376565_46377072_46378230_46378456_46378501_46378990_46379112_46379202_46379237_46379453_46379569_46379830
H1_mix_00016798	chr11	+	5606	20	NIC	ENSG00000149091.15	novel	5737	26	NA	NA	-1172	-3	intron_retention	FALSE	canonical	3	446	junction_9	45.4330959212131	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTCTGCTTTTCTTCT	8951	False	NA	25	True	AGTAAA	-13	NA	46370552	46380548	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_46371385_46371486_46371604_46371703_46371776_46372074_46372171_46372427_46372511_46372616_46372678_46372770_46372885_46372960_46373102_46374156_46374236_46374398_46374455_46374603_46374667_46374765_46374840_46374933_46375046_46375431_46375632_46375850_46375952_46376065_46376146_46376327_46376398_46376523_46376565_46377072_46379569_46379830
H1_mix_00016800	chr11	+	4256	18	NIC	ENSG00000175224.17	novel	4246	19	NA	NA	-83	0	intron_retention	FALSE	canonical	3	29	junction_11	149.269594240441	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCTCCTGTCCTGTAGGT	150	False	NA	18	True	AATAAA	-18	NA	46617443	46674518	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_46617891_46630044_46630101_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46664848_46664960_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
H1_mix_00016801	chr11	+	795	3	FSM	ENSG00000149179.14	ENST00000522712.6	825	3	-18	48	-3	-48	multi-exon	FALSE	canonical	3	315	junction_2	5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTCTTGGCAGATATTAA	-26	True	NA	NA	False	AGTAAA	-45	NA	46936726	47052954	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_46936852_46987207_46987311_47052387
H1_mix_00016803	chr11	+	1533	8	NIC	ENSG00000149179.14	novel	1527	8	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_7	136.931086496017	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGTGAGTCTAAAGCTC	38	True	NA	22	True	AATAAA	-19	NA	46936790	47162245	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_46936852_47052387_47052519_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47161126_47161191_47161445
H1_mix_00016804	chr11	+	5979	33	NIC	ENSG00000110514.19	novel	6005	33	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	29.2582620542899	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGGCTCCCTGGCTGCCT	14	False	NA	15	True	AATAAA	-15	NA	47269389	47330031	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_47269645_47273826_47273977_47274562_47275160_47275898_47276203_47276731_47276864_47278164_47278279_47278998_47279080_47281574_47281754_47282380_47282617_47282812_47282970_47284177_47284282_47284374_47284566_47284940_47285195_47285450_47285591_47286432_47286535_47289390_47289494_47289866_47290054_47290148_47290300_47290609_47290817_47293882_47293984_47295495_47295568_47295896_47296056_47308590_47308700_47309280_47309402_47309506_47309613_47311731_47311843_47315219_47315328_47323670_47323836_47324264_47324338_47324470_47324578_47326737_47326808_47328657_47328705_47329045
H1_mix_00016805	chr11	+	5658	33	NIC	ENSG00000110514.19	novel	5823	33	NA	NA	37	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_21	26.0082431343891	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGGCTCCCTGGCTGCCT	9	False	NA	15	True	AATAAA	-15	NA	47270192	47330031	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_47270247_47273826_47273977_47274562_47275160_47275898_47276203_47276731_47276864_47278164_47278279_47278998_47279080_47281574_47281754_47282380_47282617_47282812_47282970_47284177_47284282_47284374_47284566_47284940_47285066_47285450_47285591_47286432_47286535_47289390_47289494_47289866_47290054_47290148_47290300_47290609_47290817_47293882_47293984_47295495_47295577_47295896_47296056_47308590_47308700_47309280_47309402_47309506_47309613_47311731_47311843_47315219_47315328_47323670_47323836_47324264_47324338_47324470_47324578_47326737_47326808_47328657_47328705_47329045
H1_mix_00016806	chr11	+	2522	9	NIC	ENSG00000165915.14	novel	2330	10	NA	NA	-81	0	intron_retention	FALSE	canonical	3	147	junction_1	31.9938959021873	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGCCTTGGTTCTG	-3	True	NA	24	True	AATAAA	-12	NA	47408502	47416494	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_47408663_47410086_47410396_47411925_47412040_47412345_47412468_47413399_47413508_47413596_47413687_47414424_47414476_47414776_47414910_47415059
H1_mix_00016807	chr11	+	1562	11	NIC	ENSG00000165915.14	novel	2330	10	NA	NA	-81	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_8	71.7478919550951	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGCCTTGGTTCTG	-3	True	NA	24	True	AATAAA	-12	NA	47408502	47416494	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_47408663_47410086_47410396_47411925_47412040_47412345_47412468_47413399_47413508_47413596_47413687_47414424_47414476_47414776_47414906_47415059_47415160_47415287_47415497_47416324
H1_mix_00016808	chr11	+	2286	9	NIC	ENSG00000165915.14	novel	2330	10	NA	NA	-81	0	intron_retention	FALSE	canonical	3	17	junction_4	65.8174558912755	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGCCTTGGTTCTG	-3	True	NA	24	True	AATAAA	-12	NA	47408502	47416494	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_47408663_47410086_47410396_47411925_47412040_47412345_47412468_47413596_47413687_47414424_47414476_47414776_47414910_47415059_47415160_47415287
H1_mix_00016809	chr11	+	5392	2	FSM	ENSG00000183908.7	ENST00000652194.1	5407	2	0	15	0	-15	multi-exon	FALSE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGTATAGTTTAACAAATT	1192	False	NA	NA	False	AATAAA	-2	NA	57181746	57191699	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57182684_57187244
H1_mix_00016810	chr11	+	1469	6	FSM	ENSG00000149131.17	ENST00000677915.1	1468	6	-1	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	259.145055904989	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTGACAGACCATGACTT	-3	True	NA	0	True	TATAAA	-4	NA	57597684	57614831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57597723_57598248_57598322_57599878_57600378_57602034_57602170_57611716_57611937_57614327
H1_mix_00016811	chr11	+	1931	8	FSM	ENSG00000149131.17	ENST00000678592.1	1931	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	279.613873703268	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGACAGACCATGACTTTC	23	False	NA	2	True	AATAAA	-2	NA	57598183	57614833	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57598322_57599878_57600378_57602034_57602170_57606009_57606214_57606407_57606548_57606710_57606800_57611716_57611937_57614327
H1_mix_00016812	chr11	+	1635	3	FSM	ENSG00000172409.7	ENST00000302731.4	1634	3	-1	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	108	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTTGGTATAATTTATT	3	True	NA	32	True	AATAAA	-18	NA	57657761	57661864	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57657861_57659454_57659891_57660764
H1_mix_00016814	chr11	+	5650	16	FSM	ENSG00000198561.16	ENST00000532245.5	5655	16	5	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	225.086018125417	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	-25	True	NA	12	True	ATTAAA	-18	NA	57761801	57819178	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_57762047_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
H1_mix_00016816	chr11	+	5756	11	NNC	ENSG00000186660.15	novel	5776	11	NA	NA	95	78	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	19.14915141723	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATCATTTTCTAAGTTAAA	-10	True	NA	NA	False	TATAAA	-41	NA	58579157	58621628	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_58579623_58584855_58584885_58609829_58610040_58610297_58610335_58610952_58611055_58611603_58611739_58612277_58612329_58612761_58612841_58614228_58614344_58616715_58616816_58617195
H1_mix_00016819	chr11	+	2875	10	NIC	ENSG00000166900.17	novel	6154	11	NA	NA	0	-9	combination_of_known_junctions	FALSE	canonical	3	69	junction_2	203.292345595642	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAACGGTTCTGGCTCT	-1	True	NA	16	True	AATAAA	-18	NA	59755375	59802699	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_59755636_59773210_59773295_59788872_59788948_59790518_59790587_59792106_59792216_59793098_59793173_59793379_59793515_59795371_59795483_59797282_59797397_59800854
H1_mix_00016820	chr11	+	4223	9	NNC	ENSG00000006118.15	novel	3498	11	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	99.1216897303512	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCGGCCGCCGCCTCACGC	166	False	NA	NA	False	NA	NA	NA	60924449	60934607	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_60926722_60926831_60927419_60927640_60927860_60928628_60928961_60930509_60930660_60931688_60931885_60931983_60932128_60933541_60933745_60934487
H1_mix_00016821	chr11	+	1382	9	FSM	ENSG00000256713.8	ENST00000312403.10	1382	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	2.66634112596269	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTTTTGTGGAGCTGCTT	NA	False	NA	NA	False	AATAAA	-18	NA	61241174	61251444	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_61241283_61241768_61241932_61244164_61244283_61245151_61245271_61245945_61246146_61248418_61248536_61249668_61249814_61249915_61250015_61251131
H1_mix_00016822	chr11	+	2459	19	NIC	ENSG00000149476.16	novel	4678	18	NA	NA	-1	33	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	47.9305052480498	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGCCTCCTCTGAGGGA	-4	True	NA	NA	False	AATAAA	-25	NA	61333229	61346923	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_61333330_61333548_61333651_61334619_61334732_61337940_61338131_61339065_61339177_61339253_61339436_61341435_61341515_61341822_61341913_61342460_61342496_61342573_61342659_61342754_61342845_61343341_61343459_61343855_61343976_61344135_61344274_61345259_61345367_61345461_61345566_61345711_61345746_61345856_61345947_61346350
H1_mix_00016823	chr11	+	3374	18	NIC	ENSG00000149476.16	novel	4678	18	NA	NA	7	0	intron_retention	FALSE	canonical	3	28	junction_1	36.327137234497	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTAATAAACTATAATACAT	17	True	NA	NA	False	AAAAAG	-4	NA	61333250	61346890	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_61333330_61333548_61334732_61337940_61338131_61339065_61339177_61339253_61339436_61341435_61341515_61341822_61341913_61342460_61342496_61342573_61342659_61342754_61342845_61343341_61343459_61343855_61343976_61344135_61344274_61345259_61345367_61345461_61345566_61345711_61345746_61345856_61345947_61346350
H1_mix_00016824	chr11	+	483	4	FSM	ENSG00000149476.16	ENST00000530329.1	483	4	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_2	10.6770782520313	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAGTGACTTTCCATTTG	46	False	NA	NA	False	NA	NA	NA	61345355	61346190	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_61345367_61345461_61345566_61345711_61345746_61345856
H1_mix_00016827	chr11	+	1053	5	FSM	ENSG00000187049.11	ENST00000515837.7	1053	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	168.941372967074	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTTGCAGCCTTTCCT	-12	True	NA	18	True	AATAAA	-17	NA	61392586	61398846	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_61392666_61393230_61393333_61393883_61393977_61397773_61397976_61398269
H1_mix_00016828	chr11	+	357	4	NNC	ENSG00000187049.11	novel	1062	5	NA	NA	10	1525	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	169.328740095184	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTGGCTTTAACTCTTA	10	True	NA	NA	False	AGTAAA	-19	NA	61392641	61400391	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_61392666_61393230_61393333_61393883_61393977_61400253
H1_mix_00016831	chr11	+	1175	4	NNC	ENSG00000256591.5	novel	449	4	NA	NA	-7	4822	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_3	219.882291743156	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTGTGTGCACATT	11	True	NA	24	True	AATAAA	-24	NA	61430135	61473538	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_61430183_61437624_61437849_61438003_61438114_61472744
H1_mix_00016832	chr11	+	275	1	FSM	ENSG00000240823.3	ENST00000484055.3	275	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTGTATTAATTTAAAACA	NA	False	NA	NA	False	NA	NA	NA	61444148	61444423	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_61444100_61444400
H1_mix_00016834	chr11	+	1385	5	FSM	ENSG00000149503.13	ENST00000528037.1	1372	5	-13	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	3.03108891324554	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTCCCCACTGAGCCTTG	-30	True	NA	NA	False	NA	NA	NA	62123997	62137976	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62124164_62128150_62128302_62128769_62128884_62129781_62130591_62137831
H1_mix_00016835	chr11	+	3407	7	Fusion	ENSG00000149503.13_ENSG00000289194.1	novel	4114	19	NA	NA	-6762	-109	multi-exon	FALSE	canonical	0	0	junction_3	1.24721912892465	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGATTTTTGGTTTCTACT	8118	False	NA	25	True	NA	NA	NA	62145719	62154674	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr11_+_62145752_62146657_62146903_62148475_62148555_62148738_62148847_62150056_62150208_62151761_62152552_62152672
H1_mix_00016836	chr11	+	4329	6	ISM	ENSG00000149503.13_ENSG00000289194.1	ENST00000394818.8	4114	19	21709	-2306	-6762	692	3prime_fragment	FALSE	canonical	0	0	junction_3	1.2	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTGTTGTTGTTGTTGT	8118	False	NA	15	True	AATAAA	-17	NA	62145719	62155475	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_62145752_62146657_62146903_62148475_62148555_62148738_62148847_62150056_62150208_62151761
H1_mix_00016837	chr11	+	397	1	FSM	ENSG00000214756.8	ENST00000594728.1	376	1	-21	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTGTCCGCGTTCTTTT	1	True	NA	12	True	AATAAA	-17	NA	62665314	62665711	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62665300_62665700
H1_mix_00016839	chr11	+	1071	8	FSM	ENSG00000168002.12	ENST00000524819.5	1053	8	-18	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	454.091512848254	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTTGGTTCTCATGGAA	16	False	NA	5	True	TATAAA	-2	NA	62761564	62766695	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62761661_62761794_62762185_62762866_62763027_62765181_62765233_62765339_62765406_62765652_62765725_62766242_62766277_62766493
H1_mix_00016840	chr11	+	660	6	FSM	ENSG00000168002.12	ENST00000531996.5	660	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	604.515541570273	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTCTTTTCCCCACCTC	187	False	NA	NA	False	NA	NA	NA	62761794	62765724	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62761905_62762541_62762743_62762866_62763027_62765181_62765233_62765339_62765406_62765652
H1_mix_00016841	chr11	+	2270	11	FSM	ENSG00000168003.18	ENST00000680729.1	2265	11	-5	0	-5	0	multi-exon	FALSE	canonical	2	7	junction_3	999.37618542769	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAGGAATTTCTCTCCT	NA	False	NA	51	True	AATAAA	-41	NA	62855998	62888880	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62856382_62871576_62871670_62881018_62881448_62881880_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
H1_mix_00016842	chr11	+	2341	13	FSM	ENSG00000168003.18	ENST00000538084.2	2334	13	-7	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	1228.18437303471	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAGGAATTTCTCTCCT	-6	True	NA	51	True	AATAAA	-41	NA	62856101	62888880	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_62856382_62870744_62870838_62871576_62871670_62876786_62876880_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
H1_mix_00016843	chr11	+	235	2	NNC	ENSG00000287412.1	novel	335	2	NA	NA	-4569	1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	0	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTCAGTGAATTGGTTT	NA	False	NA	10	True	ATTAAA	-17	NA	63490914	63500611	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_63490940_63500401
H1_mix_00016845	chr11	+	1231	2	Intergenic	novelGene_247	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGTATTCTGT	1631	False	NA	8	True	AATAAA	-20	NA	63919643	63922207	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_63920285_63921617
H1_mix_00016846	chr11	+	1523	1	Antisense	novelGene_ENSG00000288852.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGAGACAAGCTACTGG	NA	False	NA	NA	False	ATTAAA	-8	NA	64183354	64184877	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr11_+_64183400_64184900
H1_mix_00016848	chr11	+	588	4	FSM	ENSG00000149781.13	ENST00000540957.1	588	4	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	2.16024689946929	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGATGGCTGGCTGCCG	8404	False	NA	NA	False	NA	NA	NA	64219476	64220450	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_64219659_64219739_64219790_64219890_64220016_64220219
H1_mix_00016849	chr11	+	1087	3	FSM	ENSG00000149761.9	ENST00000535000.1	1071	3	-16	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	157.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTCTGAAAATAATAAACGA	-13	True	NA	11	True	NA	NA	NA	64226273	64229983	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_64227133_64229477_64229572_64229849
H1_mix_00016850	chr11	+	475	3	FSM	ENSG00000149761.9	ENST00000537094.1	475	3	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_2	35.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCGTTGGCATCTGCTATT	2170	False	NA	44	True	AATAAA	-17	NA	64229130	64230016	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_64229345_64229477_64229572_64229849
H1_mix_00016853	chr11	+	1913	7	NIC	ENSG00000173264.15	novel	1843	7	NA	NA	-31	-1	combination_of_known_junctions	FALSE	canonical	3	4	junction_6	74.6115868273078	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTTGTGCACCTGTCTG	0	True	NA	11	True	AATAAA	-15	NA	64284848	64289490	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_64285381_64286509_64286882_64286964_64287015_64287720_64287947_64288064_64288215_64288339_64288469_64289036
H1_mix_00016854	chr11	+	2832	5	ISM	ENSG00000173153.17	ENST00000677967.1	2266	7	7310	1	-937	-1	3prime_fragment	FALSE	canonical	3	51	junction_2	102.40849574132	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAACACTGTGTTTGGTG	6453	False	NA	14	True	AATATA	-13	NA	64312833	64316737	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_64314068_64314238_64314368_64314743_64314912_64315000_64315271_64315706
H1_mix_00016856	chr11	+	384	2	FSM	ENSG00000162300.13	ENST00000526791.1	384	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACGAAAGGATGAGTCTC	24	False	NA	NA	False	AATAAA	-16	NA	65084289	65085003	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65084361_65084690
H1_mix_00016857	chr11	+	729	7	FSM	ENSG00000149809.17	ENST00000524986.5	729	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	190.456833837895	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGGTTTGGCTTCATGCTG	-6	True	NA	NA	False	NA	NA	NA	65111866	65114946	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65111891_65112514_65112712_65112810_65112866_65113219_65113415_65113490_65113595_65114712_65114833_65114912
H1_mix_00016860	chr11	+	1959	10	FSM	ENSG00000197847.12	ENST00000529062.5	1939	10	-20	0	8	0	multi-exon	FALSE	canonical	1	1	junction_4	8.27311576399391	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCAATCTGCCCCTTAAAA	3819	False	NA	-67	True	NA	NA	NA	65213855	65242355	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65214254_65214325_65214430_65217534_65217689_65220995_65221165_65222472_65222597_65223464_65223581_65233149_65233365_65236408_65236518_65236684_65236889_65241989
H1_mix_00016862	chr11	+	3165	5	FSM	ENSG00000133884.10	ENST00000532052.1	3165	5	0	0	0	0	multi-exon	FALSE	canonical	3	629	junction_1	62.4034253867526	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCTGCTGGATGGTTT	NA	False	NA	14	True	AATAAA	-14	NA	65344259	65352979	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65345804_65345929_65346059_65346246_65346360_65348849_65348932_65351682
H1_mix_00016863	chr11	+	336	3	FSM	ENSG00000173727.13	ENST00000619960.4	844	3	5	503	-4	-503	multi-exon	FALSE	canonical	1	1	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGGTGGGTGGATCACGAG	16	True	NA	NA	False	NA	NA	NA	65455262	65455815	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65455332_65455436_65455582_65455693
H1_mix_00016867	chr11	+	6777	35	NNC	ENSG00000197136.5	novel	7102	35	NA	NA	361	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_7	29.789979969352	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCAGTTTCTTTTTCTA	335	False	NA	7	True	NA	NA	NA	65616136	65637439	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_65616465_65616823_65617012_65617249_65617350_65617469_65617510_65617610_65617707_65617939_65619068_65619536_65619661_65619756_65619933_65620338_65620430_65620830_65620967_65622205_65622367_65623490_65623645_65623928_65623962_65624194_65624367_65624470_65624582_65624924_65625017_65625170_65625281_65625404_65625511_65625651_65625745_65625903_65626055_65626903_65627049_65627404_65627583_65628594_65628704_65628818_65628949_65629356_65629416_65629519_65629736_65630350_65630605_65634125_65634357_65634537_65634642_65634972_65635121_65635217_65635449_65635528_65635804_65636173_65636308_65636390_65636690_65636765
H1_mix_00016869	chr11	+	566	4	NIC	ENSG00000285533.3	novel	909	5	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	10.4243305140746	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTGGTTCTGTTCTGG	3	True	NA	14	True	AATAAA	-19	NA	65663088	65671718	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_65663149_65665420_65665544_65666130_65666218_65671422
H1_mix_00016870	chr11	+	1681	13	FSM	ENSG00000172803.18	ENST00000308342.7	1681	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_12	2.38484800354236	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCCTGTTGTCCTTACT	3	True	NA	8	True	AATAAA	-20	NA	65833962	65853701	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65834102_65849477_65849583_65849919_65850031_65850149_65850272_65850430_65850555_65850750_65850856_65851054_65851161_65851327_65851404_65851639_65851680_65852464_65852552_65852629_65852790_65852872_65852959_65853281
H1_mix_00016871	chr11	+	1817	16	FSM	ENSG00000172732.12	ENST00000524647.5	1817	16	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_12	45.4615832935409	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAGAAAAGATTGAAAAC	48	False	NA	5	True	AATAAA	-26	NA	65860859	65866417	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65860889_65860972_65861103_65861349_65861436_65861946_65862046_65862210_65862280_65862443_65862530_65863064_65863206_65863409_65863503_65863599_65863722_65863803_65863902_65864496_65864614_65864719_65864816_65865114_65865146_65865219_65865324_65865810_65865895_65865985
H1_mix_00016873	chr11	+	411	3	FSM	ENSG00000175467.15	ENST00000528137.1	403	3	-8	0	-8	0	multi-exon	FALSE	canonical	3	303	junction_2	79	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTCCTCCCTGGTCGTG	NA	False	NA	17	True	AATAAA	-13	NA	65978478	65979089	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_65978690_65978792_65978915_65979011
H1_mix_00016875	chr11	+	1327	1	FSM	ENSG00000286459.1	ENST00000659001.1	1084	1	-268	25	-268	-25	mono-exon	FALSE	NA	NA	NA	NA	NA	240	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAGGGACAAAGAC	NA	False	NA	NA	False	NA	NA	NA	66043029	66044356	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66043000_66044400
H1_mix_00016876	chr11	+	3464	7	FSM	ENSG00000175115.13	ENST00000527224.1	3024	7	-380	-60	-289	60	multi-exon	FALSE	canonical	3	164	junction_5	23.3053403512776	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGGCAGGAGAGTCACT	225	False	NA	NA	False	NA	NA	NA	66069982	66218757	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66070843_66193485_66193574_66210361_66210452_66211133_66211260_66216118_66216264_66216519_66216612_66216694
H1_mix_00016877	chr11	+	568	4	FSM	ENSG00000174996.12	ENST00000440228.6	620	4	52	0	-31	0	multi-exon	FALSE	canonical	1	3	junction_1	193.1648691317	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTCCCCAATGAGGATGA	-4	True	NA	NA	False	NA	NA	NA	66257671	66262161	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66257731_66258583_66258823_66261741_66261973_66262122
H1_mix_00016878	chr11	+	991	5	FSM	ENSG00000174903.16	ENST00000527397.1	991	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	448.347730561893	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTCTACTGCCCTGGCTG	-3	True	NA	NA	False	NA	NA	NA	66268589	66276629	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66268694_66271796_66271870_66272156_66272253_66275803_66275936_66276043
H1_mix_00016879	chr11	+	1539	5	FSM	ENSG00000174871.11	ENST00000528852.5	1524	5	-15	0	0	0	multi-exon	FALSE	canonical	3	185	junction_1	13.5531361684298	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACTGCAAATATGTGGGC	-27	True	NA	0	True	NA	NA	NA	66278174	66284193	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66278538_66282258_66282328_66282732_66282781_66283034_66283148_66283247
H1_mix_00016880	chr11	+	587	2	FSM	ENSG00000254510.3	ENST00000689212.1	2199	2	1417	195	1407	-12	multi-exon	FALSE	canonical	3	21	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGCAAGACAGGAGCAAGG	1444	False	NA	3	True	AATAAA	-3	NA	66410626	66417032	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66410974_66416792
H1_mix_00016882	chr11	+	2251	17	FSM	ENSG00000254986.8	ENST00000530165.5	2251	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	134.442308723854	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGAGCTTGGACCTTGGT	7	True	NA	NA	False	GGGGCT	-15	NA	66480437	66509345	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66480466_66482195_66482471_66486539_66486678_66487267_66487343_66487913_66488008_66491252_66491384_66491493_66491625_66491697_66491757_66492715_66492911_66493066_66493180_66493540_66493634_66495205_66495269_66495364_66495490_66495629_66495751_66497297_66497478_66504611_66504775_66509078
H1_mix_00016883	chr11	+	3352	17	NNC	ENSG00000174483.20	novel	3368	17	NA	NA	2	0	intron_retention	FALSE	canonical	3	6	junction_10	31.6992088820841	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTTTTAATGGAGTTA	26	False	NA	6	True	ATTAAA	-15	NA	66510671	66533598	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_66510707_66511012_66511090_66511204_66511240_66514405_66514679_66515539_66515587_66515692_66515732_66515860_66515934_66519616_66519749_66521269_66521377_66523455_66523577_66523702_66523883_66526122_66526193_66526648_66526808_66529818_66529953_66530893_66531029_66531655_66531743_66531950
H1_mix_00016885	chr11	+	1427	3	FSM	ENSG00000239306.5	ENST00000393979.3	1426	3	-1	0	-1	0	multi-exon	FALSE	canonical	2	6	junction_2	179	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTTGTCATTGTCTTGA	1	True	NA	25	True	AATAAA	-27	NA	66616624	66627343	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66617058_66624213_66624325_66626460
H1_mix_00016886	chr11	+	1720	14	NIC	ENSG00000173715.18	novel	1734	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	107.283564974368	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTCTTCCGCGTCTGCTT	19	True	NA	29	True	AATAAA	-20	NA	66744770	66843324	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_66744920_66759042_66759097_66788159_66788270_66800640_66800697_66801030_66801103_66803997_66804191_66813864_66814016_66816052_66816200_66821642_66821765_66822563_66822675_66828265_66828365_66838366_66838446_66842848_66843070_66843168
H1_mix_00016887	chr11	+	3602	24	Fusion	ENSG00000173715.18_ENSG00000173653.8	novel	2135	17	NA	NA	0	0	multi-exon	FALSE	canonical	0	0	junction_5	131.176254824826	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGCCTTGGGCCTTTGGG	68	False	NA	27	True	ATTAAA	-19	NA	66744819	66846526	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr11_+_66744920_66748378_66748518_66756352_66756506_66759042_66759097_66788159_66788270_66796280_66796365_66800640_66800697_66801030_66801103_66803994_66804191_66813864_66814016_66816052_66816200_66821642_66821765_66822563_66822675_66828265_66828365_66838366_66838446_66842848_66843070_66843168_66843641_66843758_66843862_66843955_66844040_66844285_66844365_66844868_66845037_66845165_66845238_66845499_66845563_66845859
H1_mix_00016888	chr11	+	3134	20	NIC	ENSG00000173715.18	novel	1998	15	NA	NA	0	3010	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	119.760818883357	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGCCTTGGGCCTTTGGG	68	False	NA	27	True	ATTAAA	-19	NA	66744819	66846526	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_66744920_66759042_66759097_66796280_66796365_66800640_66800697_66801030_66801103_66803994_66804191_66813864_66814016_66816052_66816200_66821642_66821765_66822563_66822675_66828265_66828365_66838369_66838446_66842848_66843070_66843168_66843641_66843758_66843862_66843955_66844040_66844285_66844365_66844868_66845037_66845165_66845238_66845859
H1_mix_00016889	chr11	+	274	2	FSM	ENSG00000173621.9	ENST00000531590.1	274	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCCGCTGCCCTGCGTC	55	False	NA	NA	False	NA	NA	NA	66856646	66857790	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66856865_66857734
H1_mix_00016890	chr11	+	1168	2	FSM	ENSG00000173237.5	ENST00000683896.1	1168	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATTTGCCTGGTGACTAAC	-2	True	NA	NA	False	AATAAA	-20	NA	66975303	66977009	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_66975639_66976176
H1_mix_00016892	chr11	+	2138	14	FSM	ENSG00000172932.16	ENST00000447274.7	2138	14	0	0	0	0	multi-exon	FALSE	canonical	1	30	junction_6	30.374194902521	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGCTCTGCTCACTGGGC	-24	True	NA	7	True	AATAAA	-17	NA	67289401	67302485	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67289551_67290077_67290447_67291475_67291522_67291602_67291747_67291990_67292181_67299057_67299125_67299529_67299612_67299826_67299889_67299992_67300124_67300989_67301148_67301281_67301399_67301487_67301652_67301731_67301824_67302118
H1_mix_00016893	chr11	+	3406	5	NIC	ENSG00000172932.16	novel	2768	8	NA	NA	-122	0	intron_retention	FALSE	canonical	3	32	junction_1	36.6699809108213	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCTGCTCTGCTCACTGG	8343	False	NA	5	True	AATAAA	-15	NA	67297768	67302483	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_67299622_67299826_67299889_67299992_67300124_67300989_67301148_67301281
H1_mix_00016894	chr11	+	2901	14	NIC	ENSG00000172830.13	novel	2781	14	NA	NA	0	-1	intron_retention	TRUE	canonical	3	13	junction_1	24.5154220269561	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGTTATTTTCAATGTG	NA	False	NA	10	True	AATAAA	-13	NA	67303477	67312591	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_67303692_67304048_67304156_67304772_67305008_67306837_67306963_67307041_67307114_67307370_67307437_67307548_67307738_67307845_67307940_67308173_67308303_67308411_67308459_67309396_67309544_67309767_67309969_67310065_67310340_67311590
H1_mix_00016896	chr11	+	3325	6	ISM	ENSG00000172508.11	ENST00000531388.1	5065	8	2727	1	2727	0	3prime_fragment	FALSE	canonical	1	2	junction_1	0.4	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGTCTAGATAGGTTCT	188	False	NA	NA	False	AATAAA	-16	NA	67418922	67425604	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_+_67419244_67419486_67419662_67419752_67419839_67420608_67420841_67420938_67421220_67423374
H1_mix_00016898	chr11	+	1036	5	FSM	ENSG00000110711.11	ENST00000528641.7	1030	5	-6	0	-6	0	multi-exon	FALSE	canonical	3	11	junction_2	95.2716510825754	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGAGTCTGCTGAGCTG	-3	True	NA	24	True	TATAAA	-17	NA	67483034	67491101	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67483258_67487005_67487186_67490037_67490215_67490315_67490458_67490787
H1_mix_00016899	chr11	+	1304	5	FSM	ENSG00000110711.11	ENST00000525341.2	1304	5	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_2	18.3081266108797	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTTGGCCCTGCCTTAC	48	False	NA	-80	True	NA	NA	NA	67483181	67490997	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67483258_67487005_67487186_67489266_67489456_67490037_67490215_67490315
H1_mix_00016900	chr11	+	2438	11	FSM	ENSG00000167792.13	ENST00000647561.1	2528	11	77	13	77	6	multi-exon	TRUE	canonical	1	1	junction_1	235.806361237351	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGTGACTGTGCTCTT	236	False	NA	23	True	AATAAA	-28	NA	67605729	67612541	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67606045_67606359_67607077_67608395_67608479_67608551_67608723_67609451_67609636_67610380_67610571_67610994_67611208_67611402_67611570_67611896_67611979_67612119_67612266_67612371
H1_mix_00016901	chr11	+	1493	9	FSM	ENSG00000167792.13	ENST00000532303.5	1493	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	263.034574723552	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCCGCTGCTGTGACTG	-31	True	NA	16	True	AATAAA	-21	NA	67606899	67612534	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67607077_67608551_67608723_67609451_67609636_67610380_67610571_67610994_67611208_67611402_67611570_67611896_67611979_67612119_67612266_67612371
H1_mix_00016903	chr11	+	1529	10	FSM	ENSG00000167792.13	ENST00000415352.6	1512	10	-17	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	247.291301210376	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCGCTGCTGTGACTGT	-4	True	NA	17	True	AATAAA	-22	NA	67606926	67612535	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_67607056_67608395_67608479_67608551_67608723_67609451_67609636_67610380_67610571_67610994_67611208_67611402_67611570_67611896_67611979_67612119_67612266_67612371
H1_mix_00016904	chr11	+	3370	21	NNC	ENSG00000110719.10	novel	2668	20	NA	NA	-454	0	intron_retention	TRUE	canonical	1	1	junction_1	50.3319977747754	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAATAAAGACGGTCCGC	5333	False	NA	-21	True	NA	NA	NA	68038570	68050868	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_68038609_68038859_68039120_68039791_68039963_68041267_68041389_68041752_68041832_68042642_68042864_68042945_68043498_68043570_68043654_68043797_68043908_68044131_68044345_68044957_68045103_68047432_68047573_68047646_68047805_68047881_68047973_68048878_68048998_68049080_68049295_68049662_68049789_68049961_68050067_68050136_68050255_68050486_68050665_68050740
H1_mix_00016906	chr11	+	3085	25	NIC	ENSG00000110075.15	novel	5069	25	NA	NA	-3	19	combination_of_known_junctions	FALSE	canonical	3	23	junction_3	200.531308167966	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACTGCAGACCGCCACCA	-2	True	NA	NA	False	NA	NA	NA	68460743	68613143	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_68460828_68519500_68519652_68522493_68522690_68537658_68537892_68544837_68545025_68548066_68548205_68551120_68551187_68554144_68554258_68558565_68558680_68564302_68564433_68567013_68567167_68569747_68569898_68571039_68571105_68574108_68574225_68575957_68576044_68583042_68583130_68587926_68588025_68590659_68590715_68591575_68591707_68596096_68596219_68600340_68600495_68601862_68601970_68603341_68603493_68609903_68610024_68613065
H1_mix_00016909	chr11	+	752	2	FSM	ENSG00000250508.1	ENST00000512200.1	3252	2	-67	2567	-67	-2567	multi-exon	FALSE	canonical	2	3	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATTGCACTATACTTATT	NA	False	NA	NA	False	NA	NA	NA	68870596	68871975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_68870916_68871542
H1_mix_00016910	chr11	+	4952	15	NIC	ENSG00000132740.10	novel	4597	16	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_8	29.9462102811705	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGTGTGTCTGCTGCGG	33	True	NA	24	True	ATTAAA	-19	NA	68903933	68940601	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_68904039_68906068_68906243_68908144_68908338_68908533_68908632_68911439_68911604_68914822_68915024_68917735_68917884_68929182_68930435_68933298_68933482_68933794_68933914_68934463_68934559_68935298_68935423_68936236_68937092_68938181_68938355_68939533
H1_mix_00016911	chr11	+	3882	15	NIC	ENSG00000132740.10	novel	4597	16	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_8	34.5457401609128	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGTGTGTCTGCTGCGG	2168	False	NA	24	True	ATTAAA	-19	NA	68906068	68940601	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_68906243_68908144_68908338_68908533_68908632_68911439_68911604_68914822_68915024_68917735_68917884_68929182_68929358_68930322_68930435_68933298_68933482_68933794_68933914_68934463_68934559_68935298_68935423_68936236_68937092_68938181_68938355_68939533
H1_mix_00016913	chr11	+	2695	3	FSM	ENSG00000284713.2	ENST00000641568.1	2695	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTCTCGCCTGATCGTA	9033	False	NA	NA	False	NA	NA	NA	69155477	69159752	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_69155688_69157173_69159352_69159445
H1_mix_00016914	chr11	+	4721	24	NIC	ENSG00000131620.18	novel	4777	26	NA	NA	-19	15	intron_retention	TRUE	canonical	3	6	junction_9	5.02883932460971	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCTGCCTGACGTCTG	-20	True	NA	NA	False	AATAAA	-31	NA	70078297	70189545	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_70078715_70087751_70088085_70103065_70103165_70103998_70104151_70105733_70105789_70108352_70108405_70111706_70111763_70116457_70116500_70124349_70124415_70126060_70126196_70131918_70132080_70149709_70149793_70153056_70153129_70156946_70157022_70161160_70161363_70161621_70161734_70163282_70163341_70165469_70165571_70167241_70167388_70170886_70171040_70180003_70180057_70182501_70182687_70185589_70185696_70187737
H1_mix_00016915	chr11	+	442	4	FSM	ENSG00000131620.18	ENST00000529636.5	550	4	108	0	108	0	multi-exon	FALSE	canonical	3	10	junction_3	6.34209919681348	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATCATCAATGTAAGTGAC	3129	False	NA	NA	False	NA	NA	NA	70165469	70180045	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_70165571_70167241_70167388_70170886_70171040_70180003
H1_mix_00016916	chr11	+	1143	4	FSM	ENSG00000131626.19	ENST00000530746.1	575	4	-568	0	-38	0	multi-exon	FALSE	canonical	3	14	junction_1	99.2516442628982	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGCTGAAAGCACTGAAG	NA	False	NA	NA	False	NA	NA	NA	70270651	70324955	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_70271320_70272172_70272437_70324401_70324504_70324846
H1_mix_00016918	chr11	+	4133	26	FSM	ENSG00000131626.19	ENST00000389547.7	4133	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	62.1173856500738	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACACCAGAGAAAATAACTGA	4	True	NA	NA	False	NA	NA	NA	70270716	70378580	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_70270915_70272172_70272437_70324401_70324504_70324846_70325012_70325499_70325575_70326261_70326364_70326596_70326819_70330172_70330320_70331959_70332095_70333469_70333554_70335562_70335695_70337364_70337428_70338373_70338454_70339170_70339307_70343668_70343893_70348188_70348421_70354300_70354453_70355638_70355812_70356160_70356255_70362094_70362177_70362287_70362489_70372214_70372391_70372476_70372575_70374917_70375094_70376531_70376601_70378029
H1_mix_00016919	chr11	+	739	1	FSM	ENSG00000279459.1	ENST00000624018.1	1556	1	-546	1363	-546	-1363	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAGAACCTTTGCTCAGT	NA	False	NA	NA	False	AGTAAA	-10	NA	70602757	70603496	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_70602800_70603500
H1_mix_00016921	chr11	+	2416	12	FSM	ENSG00000172890.13	ENST00000530055.5	2416	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	39.7340331256437	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCTGGAATCCAATGCACA	14	False	NA	22	True	AATAAA	-17	NA	71479293	71501539	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_71480275_71480754_71480880_71481355_71481405_71481922_71482026_71482848_71483018_71484311_71484448_71485541_71485649_71490844_71490977_71491833_71491904_71497482_71497612_71498351_71498529_71501301
H1_mix_00016926	chr11	+	2103	5	FSM	ENSG00000158483.18	ENST00000359244.9	2111	5	8	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	40.106109260311	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCCTTAATCTACAGATG	-2	True	NA	NA	False	AATAAA	-21	NA	71787521	71801237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_71787633_71789782_71789846_71793379_71793482_71796016_71796167_71799560
H1_mix_00016941	chr11	+	785	7	FSM	ENSG00000149273.15	ENST00000526248.5	771	7	-14	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	7257.07685450707	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGACTAGACTGTTCAG	22	False	NA	68	True	AATAAA	-20	NA	75399542	75405692	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_75399578_75400693_75400825_75401639_75401734_75402351_75402447_75404053_75404208_75404671_75404869_75405613
H1_mix_00016942	chr11	+	531	5	FSM	ENSG00000149273.15	ENST00000530170.1	531	5	0	0	0	0	multi-exon	FALSE	canonical	2	499	junction_3	8084.32877161116	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTCTGGAGTCTGGATG	1174	False	NA	4	True	NA	NA	NA	75400694	75405628	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_75400825_75401639_75401734_75402351_75402447_75404671_75404869_75405613
H1_mix_00016947	chr11	+	6907	20	NIC	ENSG00000158636.16	novel	5508	21	NA	NA	0	88	combination_of_known_splicesites	TRUE	canonical	3	16	junction_5	10.546034162902	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTATTTTCAGTTCTTAT	18	True	NA	NA	False	NA	NA	NA	76445046	76553113	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_76445129_76446899_76447009_76451857_76451958_76453313_76453389_76458182_76458359_76463820_76464081_76472563_76472841_76496214_76496470_76513385_76513536_76516141_76516313_76523154_76523292_76526461_76526636_76528267_76528467_76535894_76536060_76537794_76537951_76539598_76539641_76542215_76542368_76544258_76544823_76545796_76546298_76549951
H1_mix_00016948	chr11	+	6836	21	NIC	ENSG00000158636.16	novel	5508	21	NA	NA	10	-126	combination_of_known_junctions	FALSE	canonical	3	11	junction_5	11.5108644332213	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGGTCTTTTGTGACTT	28	False	NA	22	True	TATAAA	-14	NA	76445056	76552899	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_76445129_76446899_76447009_76451857_76451958_76453313_76453389_76458182_76458359_76459932_76460086_76463820_76464081_76472563_76472841_76496214_76496470_76513385_76513536_76516141_76516313_76523154_76523292_76526461_76526636_76528267_76528467_76535894_76536060_76537794_76537951_76539598_76539641_76542215_76542368_76544258_76544823_76545796_76546298_76549951
H1_mix_00016961	chr11	+	1412	4	FSM	ENSG00000171204.13	ENST00000528361.5	1388	4	-24	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	156.768052300914	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAATCCAGGTCTGGTTTG	NA	False	NA	0	True	AATAAA	-13	NA	85628572	85635087	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_85628689_85631144_85631317_85631686_85631809_85634085
H1_mix_00016969	chr11	+	10631	20	Fusion	ENSG00000077616.11_ENSG00000280385.1	novel	3466	19	NA	NA	-18	2261	multi-exon	FALSE	canonical	1	1	junction_19	5.01907717952932	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTGCTATAGTAATTAT	-28	True	NA	NA	False	AATATA	-13	NA	90134644	90200381	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr11_+_90134841_90135558_90135671_90147329_90147517_90149005_90149108_90150481_90150608_90152297_90152485_90158144_90158239_90159238_90159338_90162948_90163035_90163309_90163430_90163534_90163618_90168928_90168993_90170068_90170137_90173823_90173916_90175971_90176063_90177852_90178118_90181619_90181702_90182915_90183009_90191557_90199347_90199686
H1_mix_00016976	chr11	+	3161	9	NNC	ENSG00000182919.15	novel	1356	5	NA	NA	1356	-1	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	63.7709524391788	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATGTTTGTAATATCTTA	1384	False	NA	9	True	AATAAA	-14	NA	93743043	93763082	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_93743766_93747296_93747449_93750345_93750445_93753681_93753756_93753935_93754038_93755209_93755387_93757315_93757466_93759741_93759859_93761514
H1_mix_00016991	chr11	+	558	2	FSM	ENSG00000075239.14	ENST00000533597.1	558	2	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAACCTTGAAAAGTTTG	NA	False	NA	25	True	AATAAA	-22	NA	108146120	108147588	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_108146360_108147269
H1_mix_00016994	chr11	+	1437	4	FSM	ENSG00000137720.8	ENST00000529270.1	1437	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	58.8179866669674	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATATTCTTTATCCCTT	1257	False	NA	6	True	AATAAA	-17	NA	111880775	111884069	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_111881616_111882367_111882599_111883135_111883203_111883770
H1_mix_00017014	chr11	+	3098	6	FSM	ENSG00000149582.16	ENST00000524522.5	3098	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	27.0584552404604	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTCTGCTTCATTTCTT	5	True	NA	20	True	AATAAA	-20	NA	118531201	118535834	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_118532462_118532916_118533208_118533856_118533888_118534028_118534130_118534268_118534356_118534506
H1_mix_00017016	chr11	+	4969	19	NIC	ENSG00000019144.20	novel	5242	18	NA	NA	140	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_6	65.9650346961869	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGAGTGGAAGGCCGGT	13	True	NA	40	True	AATAAA	-15	NA	118621502	118658025	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_118621539_118624933_118625060_118627307_118628651_118631206_118631480_118631912_118632054_118632158_118632297_118634922_118635052_118635392_118635549_118638890_118639002_118639161_118639252_118643799_118643941_118644071_118644175_118645355_118645651_118645734_118645826_118647929_118648077_118650076_118650194_118650444_118650548_118655604_118655691_118656682
H1_mix_00017018	chr11	+	1924	2	FSM	ENSG00000196655.12	ENST00000524797.1	1924	2	0	0	0	0	multi-exon	FALSE	canonical	3	1073	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCTTAATCGATGGTTT	1545	False	NA	35	True	AATAAA	-27	NA	119020316	119023674	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_119021887_119023320
H1_mix_00017020	chr11	+	1510	15	NNC	ENSG00000256269.11	novel	1505	14	NA	NA	0	76200	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	201.402391915756	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTTGGGACTCTAACAGA	12	True	NA	NA	False	NA	NA	NA	119084908	119170034	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_119085067_119088254_119088309_119088634_119088708_119089081_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092124_119092164_119092403_119092524_119092757_119092812_119092934_119093022_119093109_119093548_119169999
H1_mix_00017023	chr11	+	3075	9	NIC	ENSG00000160703.16	novel	2850	9	NA	NA	-1	-3	combination_of_known_junctions	FALSE	canonical	3	17	junction_8	43.126992707584	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCAATTGTGGCCTCTTC	21	False	NA	9	True	ATTAAA	-15	NA	119168740	119184009	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_119169043_119171355_119171474_119172900_119172990_119173478_119174099_119174452_119175275_119179692_119180289_119181170_119181258_119182093_119182346_119183820
H1_mix_00017024	chr11	+	3642	9	NIC	ENSG00000160703.16	novel	3744	10	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	39.0830445973698	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAATTGTGGCCTCTTCTTT	39	False	NA	12	True	ATTAAA	-18	NA	119168758	119184012	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_119168922_119171355_119171474_119172900_119172990_119173478_119174099_119174452_119175275_119179692_119180289_119181170_119181258_119182093_119182346_119183117
H1_mix_00017036	chr11	+	2105	9	NIC	ENSG00000154134.15	novel	2139	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	30	junction_1	23.2402533333869	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCAGGGCCCTGTCTGTCT	-11	True	NA	14	True	AATAAA	-16	NA	124876845	124881466	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_124876933_124877266_124877310_124877518_124878437_124878583_124878797_124879189_124879342_124879464_124879576_124879786_124879949_124880417_124880609_124881238
H1_mix_00017044	chr11	+	1988	14	NIC	ENSG00000149554.14	novel	1913	14	NA	NA	53	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	122.590867155996	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTTGATTCTTTCCTGG	7	True	NA	20	True	AATAAA	-16	NA	125626393	125676255	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_125626576_125626748_125626834_125627606_125627831_125629231_125629297_125629390_125629461_125633162_125633352_125635428_125635534_125637448_125637545_125643791_125643901_125644090_125644269_125644511_125644644_125653745_125653848_125655224_125655348_125675927
H1_mix_00017045	chr11	+	2093	15	NIC	ENSG00000149554.14	novel	1913	14	NA	NA	78	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	121.29111968436	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTTGATTCTTTCCTGG	32	True	NA	20	True	AATAAA	-16	NA	125626418	125676255	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_125626576_125626748_125626834_125627606_125627831_125629231_125629297_125629390_125629461_125633162_125633352_125635428_125635534_125637448_125637545_125643791_125643901_125644090_125644269_125644511_125644644_125653745_125653848_125655224_125655348_125656205_125656336_125675927
H1_mix_00017046	chr11	+	2113	15	NIC	ENSG00000149554.14	novel	1913	14	NA	NA	-92	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	123.909879199624	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTTGATTCTTTCCTGG	79	False	NA	20	True	AATAAA	-16	NA	125626465	125676255	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_+_125626643_125626748_125626834_125627606_125627831_125629231_125629297_125629390_125629461_125633162_125633352_125635428_125635534_125637448_125637545_125643791_125643901_125644090_125644269_125644511_125644644_125653745_125653848_125655224_125655348_125656205_125656336_125675927
H1_mix_00017061	chr11	+	2308	16	NNC	ENSG00000166105.16	novel	2946	20	NA	NA	168	0	at_least_one_novel_splicesite	TRUE	canonical	2	10	junction_1	44.1480338054696	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCCTCCCATACTCAA	177	False	NA	14	True	AATAAA	-17	NA	134276546	134319564	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_+_134276764_134277384_134277452_134277699_134277913_134281376_134281446_134282024_134282121_134283736_134283846_134288797_134288891_134292131_134292214_134293144_134293210_134312348_134312490_134312815_134312888_134313395_134313475_134313940_134314029_134314329_134314442_134318630_134318748_134318876
H1_mix_00017062	chr11	+	3129	20	FSM	ENSG00000149328.15	ENST00000339772.9	3152	20	23	0	23	0	multi-exon	TRUE	non_canonical	0	0	junction_19	20.2595348777459	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCCCCTCTGGTGATAGT	NA	False	NA	17	True	AGTAAA	-17	NA	134331896	134376321	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_+_134332148_134342753_134342952_134344386_134344456_134345033_134345130_134347324_134347434_134356300_134356394_134359059_134359142_134364327_134364399_134367256_134367342_134368643_134368782_134369804_134369886_134370292_134370400_134371007_134371149_134371420_134371493_134371751_134371831_134373720_134373809_134374144_134374257_134374601_134374719_134374971_134375885_134376094
H1_mix_00017064	chr11	-	1424	1	Genic_Genomic	ENSG00000230724.9	novel	NA	NA	NA	NA	10579	208	mono-exon	FALSE	NA	NA	NA	NA	NA	309	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCCACGATCAACGTGTTC	NA	False	NA	NA	False	AATGAA	-7	NA	128419	126995	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr11_-_127000_128400
H1_mix_00017065	chr11	-	643	5	FSM	ENSG00000230724.9	ENST00000527683.1	683	5	40	0	40	0	multi-exon	FALSE	canonical	3	32	junction_1	4.30116263352131	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTCCAGAGGGGTGACAG	NA	False	NA	NA	False	NA	NA	NA	139077	133613	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_133779_134563_134797_134889_134948_138046_138112_138955
H1_mix_00017067	chr11	-	4349	5	ISM	ENSG00000142082.15	ENST00000532837.5	1588	7	17	8	0	-8	intron_retention	FALSE	canonical	3	189	junction_1	14.972892172189	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAATCTGTTCTTTCCAGC	554	False	NA	-61	True	GGGGCT	-14	NA	236326	216186	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_216719_218831_219042_224077_224240_230451_230553_232982
H1_mix_00017068	chr11	-	1235	6	FSM	ENSG00000142082.15	ENST00000532956.5	1235	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	75.9278604992924	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGGGCTGTGTTTACAGT	-8	True	NA	NA	False	NA	NA	NA	236352	216524	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_216719_218831_219042_230451_230553_232982_233216_233342_233535_236047
H1_mix_00017073	chr11	-	823	3	ISM	ENSG00000185187.13	ENST00000527987.1	803	4	65	-17	9	5	intron_retention	FALSE	canonical	3	236	junction_1	10.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCGGTCTCCTCCCTTGC	23	True	NA	-1	True	AATAAA	-22	NA	407126	405710	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_406060_406348_406539_406842
H1_mix_00017074	chr11	-	1405	9	NIC	ENSG00000185187.13	novel	1639	10	NA	NA	-32	5	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	81.8164867248649	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCGGTCTCCTCCCTTGC	-14	True	NA	-1	True	AATAAA	-22	NA	417357	405710	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_406060_406348_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_409867_410028_417324
H1_mix_00017075	chr11	-	1872	7	FSM	ENSG00000185187.13	ENST00000527295.5	1867	7	0	-5	0	5	multi-exon	FALSE	canonical	2	5	junction_3	86.686696403389	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCGGTCTCCTCCCTTGC	NA	False	NA	-1	True	AATAAA	-22	NA	417455	405710	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_406060_406348_407165_407424_407535_407816_407958_408072_408207_409867_410028_417293
H1_mix_00017077	chr11	-	1450	9	NIC	ENSG00000185187.13	novel	1598	10	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	68.0620121653775	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTCGGTCTCCTCC	15	True	NA	-6	True	AATAAA	-17	NA	417328	405715	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_406060_406348_406539_407061_407165_407424_407569_407816_407958_408072_408207_408694_408894_409867_410028_417293
H1_mix_00017078	chr11	-	1451	8	NIC	ENSG00000185187.13	novel	1598	10	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_7	71.2208407930242	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTCGGTCTCCTCC	13	True	NA	-6	True	AATAAA	-17	NA	417330	405715	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_406060_406141_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_417293
H1_mix_00017081	chr11	-	2268	13	NIC	ENSG00000185522.9	novel	2057	14	NA	NA	11	1	intron_retention	FALSE	canonical	2	7	junction_9	5.70270403697521	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGAGCTGGAAATGTTGG	9043	False	NA	-11	True	AGTAAA	-17	NA	559371	554853	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_555112_555304_555504_555733_555931_555995_556116_556191_556376_556491_557098_557398_557488_557571_557641_557883_558040_558160_558249_558613_558767_558855_558980_559346
H1_mix_00017082	chr11	-	2039	13	NNC	ENSG00000177030.19	novel	2331	13	NA	NA	-4	59503	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	203.779479803264	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTCCTGGAGAAATAAAAAG	-5	True	NA	NA	False	NA	NA	NA	695045	584729	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_584755_644231_644655_653961_654052_674535_674784_678693_678823_679687_679817_680962_681090_684897_684964_686857_686998_687910_688058_688330_688461_691500_691599_694758
H1_mix_00017083	chr11	-	1928	11	NIC	ENSG00000185507.21	novel	1923	11	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_7	19.1428837952906	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTACTGGCATCTTGGCTGG	9210	False	NA	-5	True	AATAAA	-16	NA	615958	612554	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_612801_612998_613118_613205_613596_613784_613866_613950_614038_614173_614400_614475_614532_614796_615008_615096_615260_615344_615648_615912
H1_mix_00017086	chr11	-	775	8	NIC	ENSG00000177225.17	novel	790	8	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	24.022948212414	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAATGGTGTCCTGGTGT	20	True	NA	-36	True	AATAAA	-15	NA	777467	767227	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_767369_770313_770399_771332_771427_772426_772522_773521_773630_774007_774114_775065_775143_777398
H1_mix_00017089	chr11	-	365	2	FSM	ENSG00000078902.16	ENST00000527085.1	595	2	0	230	0	-230	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTCTCCATGCTGCTGTC	-20	True	NA	NA	False	NA	NA	NA	1309644	1298378	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_1298565_1309465
H1_mix_00017090	chr11	-	263	2	NNC	ENSG00000236264.5	novel	1178	2	NA	NA	390	42086	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATTAGGATATCAAAG	422	False	NA	NA	False	NA	NA	NA	2335359	2293048	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_2293074_2335121
H1_mix_00017091	chr11	-	91748	1	FSM	ENSG00000269821.1	ENST00000597346.1	91667	1	12	-93	12	93	mono-exon	FALSE	NA	NA	NA	NA	NA	2591	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGATGAGTGAATCTAACA	22	False	NA	NA	False	AAGAAA	-13	NA	2699982	2608234	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_2608200_2700000
H1_mix_00017093	chr11	-	2505	23	NNC	ENSG00000110619.18	novel	2737	23	NA	NA	0	4219	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	136.991471351834	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCAAGAAATTTGAATGAC	-9	True	NA	NA	False	NA	NA	NA	3057418	2996702	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_2996725_3000928_3001249_3001969_3002054_3002540_3002601_3005365_3005434_3006878_3006960_3012194_3012277_3015780_3015850_3017105_3017296_3017856_3017955_3018407_3018512_3018619_3018750_3019138_3019268_3020219_3020333_3026675_3026798_3028995_3029085_3029302_3029444_3038049_3038200_3039193_3039293_3039834_3039932_3040895_3040985_3042164_3042257_3057342
H1_mix_00017094	chr11	-	2500	22	NIC	ENSG00000110619.18	novel	2491	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_20	150.412765415705	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCTCTCTGTCTTGTTCT	-6	True	NA	-9	True	AATAAA	-17	NA	3057380	3000928	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_3001249_3001961_3002054_3002540_3002601_3005365_3005434_3006878_3006960_3012194_3012277_3015780_3015850_3017105_3017296_3017856_3017955_3018407_3018512_3018619_3018750_3019138_3019268_3020219_3020333_3026675_3026798_3028995_3029085_3029302_3029444_3038049_3038200_3039193_3039293_3039834_3039932_3040895_3041032_3042164_3042257_3057342
H1_mix_00017095	chr11	-	1018	6	FSM	ENSG00000005801.18	ENST00000438262.6	1018	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	162.974353810653	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTCCCACCTTACTGA	25	True	NA	NA	False	NA	NA	NA	3379126	3359996	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3360566_3362545_3362603_3370974_3371071_3371576_3371704_3373576_3373657_3379037
H1_mix_00017097	chr11	-	4255	1	FSM	ENSG00000189398.5	ENST00000344740.4	973	1	-779	-2503	-779	2503	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTAGAATACGACGAAGAAT	4595	False	NA	NA	False	NA	NA	NA	3392531	3388276	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3388300_3392500
H1_mix_00017098	chr11	-	8809	1	NIC	ENSG00000166492.9	novel	971	8	NA	NA	1262	-2074	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTACCACACCTGGCTAA	NA	False	NA	NA	False	NA	NA	NA	3421234	3412425	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_3412400_3421200
H1_mix_00017099	chr11	-	209	1	FSM	ENSG00000284639.1	ENST00000641667.1	209	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGACGCGGGCGCTGG	NA	False	NA	NA	False	NA	NA	NA	3581135	3580926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_3580900_3581100
H1_mix_00017101	chr11	-	1984	7	NNC	ENSG00000132109.10	novel	1935	7	NA	NA	8	0	intron_retention	FALSE	canonical	1	1	junction_1	32.1217302702634	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCGTCTATCCCATTCAG	-8	True	NA	-18	True	AATAAA	-23	NA	4393694	4384896	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_4385911_4386156_4386258_4386967_4386991_4388299_4388531_4389653_4389750_4390001_4390459_4393632
H1_mix_00017102	chr11	-	1025	2	FSM	ENSG00000170955.10	ENST00000532354.1	1025	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGACTCCGTGAGAAGGGA	10	True	NA	-31	True	AATAAA	-17	NA	6320062	6318945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_6319565_6319656
H1_mix_00017106	chr11	-	2415	4	NIC	ENSG00000149050.10	novel	2562	4	NA	NA	-4	-234	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	7.34846922834953	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTCTATTTCATTCTAGT	29	False	NA	NA	False	ATTAAA	-20	NA	7020318	6999596	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_7001556_7002708_7002856_7019682_7019746_7020072
H1_mix_00017107	chr11	-	1938	12	NNC	ENSG00000166394.15	novel	1338	10	NA	NA	-1851	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	153.058083287045	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCATGAAGTGTGGCTCTG	NA	False	NA	-3	True	AATAAA	-20	NA	7679073	7665099	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_7665547_7666450_7666551_7667727_7667814_7668477_7668562_7669204_7669335_7669624_7669732_7672450_7672524_7672747_7672892_7674225_7674494_7677147_7677247_7678489_7678665_7678848
H1_mix_00017109	chr11	-	2970	12	Fusion	ENSG00000183378.13_ENSG00000254951.7	novel	1450	12	NA	NA	38	-2444	multi-exon	TRUE	canonical	2	6	junction_1	6.13215343783275	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGAGGCCCTTTCCTACTT	343	False	NA	-3	True	AATAAA	-24	NA	7905917	7698948	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr11_-_7700486_7701323_7701476_7701715_7701812_7702156_7702330_7703697_7703790_7704564_7704675_7879006_7879084_7879594_7879760_7881088_7881150_7881955_7882074_7882859_7882934_7905602
H1_mix_00017110	chr11	-	927	1	FSM	ENSG00000183303.3	ENST00000329434.3	969	1	66	-24	66	24	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCAATGCACGTGTAGATA	NA	False	NA	NA	False	NA	NA	NA	7796876	7795949	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_7795900_7796900
H1_mix_00017112	chr11	-	207	1	FSM	ENSG00000252769.1	ENST00000516960.1	98	1	1	-110	1	110	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGATAATGTAATACATTTC	NA	False	NA	NA	False	NA	NA	NA	7889278	7889071	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_7889100_7889300
H1_mix_00017113	chr11	-	1657	2	NNC	ENSG00000254951.7	novel	2503	8	NA	NA	37	-18190	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGTTCAAGTGCTATTT	342	False	NA	NA	False	AATAAA	-25	NA	7905918	7899170	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_7900512_7905602
H1_mix_00017114	chr11	-	4246	9	NNC	ENSG00000166405.15	novel	1211	7	NA	NA	1	13091	intron_retention	FALSE	canonical	3	11	junction_1	11.1551557586616	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATGTGTAACATGAATGA	10	True	NA	NA	False	AATAAA	-16	NA	8169007	8092964	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_8094160_8107334_8107398_8110251_8110408_8110658_8111138_8126658_8126805_8137377_8137472_8138271_8140194_8153374_8153424_8168865
H1_mix_00017115	chr11	-	2548	13	FSM	ENSG00000130413.16	ENST00000396672.5	2558	13	11	-1	11	0	multi-exon	FALSE	canonical	0	0	junction_12	26.371807337045	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTAATTTTTATGTTAACA	4	True	NA	-6	True	AATAAA	-20	NA	8593945	8391869	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_8392711_8413494_8413693_8435493_8435580_8436026_8436140_8440677_8440754_8452821_8452907_8454743_8454833_8457340_8457480_8461804_8461910_8464708_8464823_8473162_8473277_8474680_8475067_8593743
H1_mix_00017116	chr11	-	2523	15	NIC	ENSG00000130413.16	novel	2796	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_13	31.369831471186	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTAATTTTTATGTTAACA	-8	True	NA	-6	True	AATAAA	-20	NA	8594160	8391869	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_8392711_8413494_8413693_8435493_8435580_8436026_8436140_8440677_8440754_8452821_8452907_8454743_8454833_8457340_8457480_8461804_8461910_8464708_8464823_8473162_8473277_8474680_8475067_8476686_8476752_8477249_8477284_8594082
H1_mix_00017117	chr11	-	4502	23	NIC	ENSG00000166444.19	novel	4545	23	NA	NA	0	1	intron_retention	FALSE	canonical	3	10	junction_20	41.0349578846505	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATGTGTTCCTTGGCTTT	45	True	NA	-15	True	AATAAA	-28	NA	8871007	8693349	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_8694131_8695462_8695550_8696426_8696667_8697524_8697637_8698932_8698975_8699212_8699391_8702571_8702721_8707084_8707226_8707776_8707855_8710844_8710915_8711121_8711232_8712550_8712736_8713997_8714043_8714609_8714707_8715602_8715819_8717740_8717893_8726072_8726210_8729949_8731210_8750620_8750726_8811246_8811336_8831555_8831689_8839309_8839351_8870953
H1_mix_00017118	chr11	-	3316	21	NIC	ENSG00000166444.19	novel	4545	23	NA	NA	-135	1	combination_of_known_junctions	TRUE	canonical	3	20	junction_19	39.8901930303677	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATGTGTTCCTTGGCTTT	174	False	NA	-15	True	AATAAA	-28	NA	8871214	8693349	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_8694131_8695462_8695550_8696426_8696667_8697524_8697637_8698932_8698975_8699212_8699391_8702571_8702721_8707084_8707226_8707776_8707855_8710844_8710915_8711121_8711232_8712550_8712736_8713997_8714043_8714609_8714707_8715602_8715819_8717740_8717893_8726072_8726210_8750620_8750726_8811246_8811336_8839309_8839351_8870953
H1_mix_00017119	chr11	-	826	4	NNC	ENSG00000166444.19	novel	769	5	NA	NA	-381	1022	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	74.4222189044822	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGAGATTTGTGTTCCC	869	False	NA	NA	False	NA	NA	NA	8698154	8695413	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_8695550_8696426_8696667_8697524_8697637_8697816
H1_mix_00017120	chr11	-	986	3	FSM	ENSG00000175356.14	ENST00000524317.1	2322	3	1336	0	-33	0	multi-exon	FALSE	canonical	2	3	junction_2	2	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGCAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	9025854	9020444	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_9021198_9021875_9021956_9025701
H1_mix_00017121	chr11	-	2573	7	FSM	ENSG00000184014.9	ENST00000525784.6	2553	7	0	-20	0	1	multi-exon	FALSE	canonical	3	183	junction_4	28.7634026730728	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGGATCACTGATTTTT	NA	False	NA	-7	True	AATAAA	-18	NA	9146534	9138823	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_9139855_9141939_9142109_9142721_9142846_9143402_9143486_9144096_9144279_9144994_9145114_9145669
H1_mix_00017123	chr11	-	4060	23	FSM	ENSG00000184014.9	ENST00000530044.5	4060	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	73.1062286071236	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGAGGGAGCGAGGCTGG	8	True	NA	43	True	NA	NA	NA	9265087	9139458	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_9139855_9141973_9142109_9142721_9142846_9143402_9143486_9144096_9144279_9144994_9145114_9145669_9145816_9147029_9147152_9150080_9150210_9150679_9150765_9152357_9152443_9160712_9160866_9165835_9165968_9169855_9169950_9170626_9170778_9178131_9178367_9178857_9179074_9180766_9181085_9193493_9193682_9203659_9204318_9206672_9206783_9207560_9207633_9264960
H1_mix_00017124	chr11	-	3848	7	FSM	ENSG00000166471.11	ENST00000524543.5	3848	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	142.732850692007	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACATTTGGGATTTATT	-27	True	NA	-5	True	AATAAA	-21	NA	9314636	9280653	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_9283594_9286454_9286594_9287701_9287807_9288441_9288543_9295258_9295388_9299583_9299702_9314320
H1_mix_00017125	chr11	-	1146	1	FSM	ENSG00000254884.1	ENST00000533804.1	406	1	-272	-468	-272	468	mono-exon	FALSE	NA	NA	NA	NA	NA	752	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTAGAGTCTGTTTGGTC	3546	False	NA	NA	False	NA	NA	NA	9311961	9310815	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_9310800_9312000
H1_mix_00017126	chr11	-	921	6	FSM	ENSG00000133812.18	ENST00000533661.2	894	6	16	-43	7	3	multi-exon	FALSE	canonical	3	13	junction_1	61.8921642859579	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTGGGTAAATTGTTTTG	190	False	NA	-2	True	AATAAA	-24	NA	10044599	10016417	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_10016780_10028451_10028558_10029764_10029876_10031047_10031171_10042843_10042982_10044518
H1_mix_00017128	chr11	-	383	1	FSM	ENSG00000255823.5	ENST00000536684.3	1293	1	917	-7	917	7	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGTTAGCTGGACAGACTA	5184	False	NA	NA	False	NA	NA	NA	10508269	10507886	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_10507900_10508300
H1_mix_00017129	chr11	-	4001	22	FSM	ENSG00000110321.19	ENST00000526148.6	4001	22	0	0	0	0	multi-exon	TRUE	canonical	1	41	junction_21	1463.11589508452	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGTGTGGCTGTAAATG	1014	False	NA	-4	True	AATAAA	-20	NA	10807973	10797049	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_10797882_10798991_10799114_10799212_10799425_10799551_10799757_10800089_10800349_10800431_10800648_10800730_10800836_10800961_10801088_10801660_10801775_10802048_10802210_10802293_10802436_10803029_10803129_10803210_10803295_10803479_10803591_10803898_10804051_10804136_10804204_10804286_10804419_10804912_10805016_10805906_10806048_10806819_10806886_10807254_10807382_10807548
H1_mix_00017130	chr11	-	3670	22	NNC	ENSG00000110321.19	novel	3794	22	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_11	1471.75354247779	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAATTGGTCCCTCCTA	12	True	NA	-74	True	NA	NA	NA	10808919	10797169	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_10797882_10798991_10799114_10799212_10799425_10799551_10799757_10800089_10800349_10800431_10800648_10800730_10800836_10800961_10801088_10801660_10801775_10802048_10802210_10802293_10802436_10803030_10803129_10803210_10803295_10803479_10803591_10803898_10804051_10804136_10804204_10804286_10804419_10804912_10805016_10805906_10806048_10806819_10806886_10807254_10807382_10808704
H1_mix_00017132	chr11	-	475	1	FSM	ENSG00000252329.1	ENST00000516520.1	172	1	52	-355	52	355	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATCCATTGCTCTAACA	NA	False	NA	NA	False	AATGAA	-21	NA	12904936	12904461	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_12904500_12904900
H1_mix_00017133	chr11	-	1118	7	FSM	ENSG00000148925.11	ENST00000525108.5	1139	7	21	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	78.5862936876117	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCAGAGTGGGGAACGGG	-42	True	NA	NA	False	AAGAAA	-26	NA	13463276	13405765	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_13405857_13413529_13413651_13417157_13417261_13419459_13419746_13421641_13421816_13445023_13445182_13463091
H1_mix_00017134	chr11	-	1884	5	FSM	ENSG00000133818.14	ENST00000414023.6	1884	5	0	0	0	0	multi-exon	FALSE	canonical	3	1065	junction_1	60.6506389084237	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCTTCAGGTGCTAGAAT	NA	False	NA	-58	True	NA	NA	NA	14295859	14277963	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_14279425_14281601_14281721_14294470_14294580_14294759_14294863_14295767
H1_mix_00017135	chr11	-	646	3	FSM	ENSG00000129084.18	ENST00000524606.1	646	3	0	0	0	0	multi-exon	FALSE	canonical	3	1417	junction_2	114	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTTTTTGTTTTTTTAA	9401	False	NA	0	True	AATAAA	-22	NA	14511031	14504873	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_14505249_14507655_14507767_14510871
H1_mix_00017136	chr11	-	5625	25	NNC	ENSG00000166689.16	novel	5530	27	NA	NA	-44232	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	20.5892366703253	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTTTCCTGTTTCTTGCT	-1	True	NA	-26	True	ATTAAA	-13	NA	16925851	16777296	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_16779021_16782753_16782897_16783699_16783834_16786228_16786388_16789095_16789297_16789774_16789879_16790797_16790916_16791010_16791203_16794487_16794715_16794909_16795019_16800973_16801076_16801667_16801818_16802971_16803053_16803226_16803296_16813112_16813167_16816177_16816265_16816799_16817323_16826119_16826591_16841546_16841723_16851190_16851292_16852282_16852356_16854888_16854994_16855802_16855915_16871098_16871183_16925525
H1_mix_00017137	chr11	-	5460	27	NIC	ENSG00000166689.16	novel	5530	27	NA	NA	71	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_4	14.4090701218069	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTTTCCTGTTTCTTGCT	392	False	NA	-26	True	ATTAAA	-13	NA	17014341	16777296	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_16779021_16782753_16782897_16783699_16783834_16786228_16786388_16789095_16789297_16789774_16789879_16790797_16790916_16791010_16791203_16794487_16794715_16794909_16795019_16800973_16801076_16801667_16801818_16802971_16803053_16803226_16803296_16813112_16813167_16816177_16816265_16816799_16817323_16826119_16826591_16841546_16841723_16851190_16851292_16852282_16852356_16854888_16854994_16855802_16855915_16871098_16871183_17013988_17014047_17014124_17014202_17014315
H1_mix_00017138	chr11	-	423	1	FSM	ENSG00000244398.1	ENST00000459748.1	321	1	-36	-66	-36	66	mono-exon	FALSE	NA	NA	NA	NA	NA	1514	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGAAATCTCTGTGAGG	NA	False	NA	-1	True	AATAAA	-38	NA	16975049	16974626	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_16974600_16975000
H1_mix_00017140	chr11	-	696	2	FSM	ENSG00000006071.16	ENST00000682053.1	3269	2	2573	0	2573	0	multi-exon	FALSE	canonical	3	8	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTTCTATGCAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	17453283	17448140	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_17448672_17453118
H1_mix_00017141	chr11	-	227	3	FSM	ENSG00000006071.16	ENST00000612903.2	439	3	0	212	0	-212	multi-exon	FALSE	canonical	3	4	junction_1	0.5	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGGGATGGCGTTCATGG	165	False	NA	NA	False	NA	NA	NA	17476677	17470186	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_17470223_17474885_17475028_17476628
H1_mix_00017142	chr11	-	1306	11	NIC	ENSG00000129158.11	novel	1314	11	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	35	junction_9	52.8673812477978	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCCAGAGAATTGTTTTG	23	True	NA	-6	True	AATAAA	-22	NA	18012898	17788045	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_17788414_17878207_17878245_17988596_17988756_17992930_17992994_17995795_17995910_18000496_18000558_18004440_18004536_18006590_18006747_18007940_18008077_18010070_18010140_18012850
H1_mix_00017143	chr11	-	1254	10	NIC	ENSG00000129158.11	novel	1314	11	NA	NA	3	2	combination_of_known_junctions	FALSE	canonical	3	59	junction_9	41.5222683078863	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCCAGAGAATTGTTTTG	6	True	NA	-6	True	AATAAA	-22	NA	18012915	17788045	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_17788414_17878207_17878245_17988596_17988756_17992930_17992994_17995795_17995910_18000496_18000558_18004440_18004536_18006590_18006747_18007940_18008077_18012850
H1_mix_00017145	chr11	-	3969	20	NIC	ENSG00000110756.18	novel	4725	22	NA	NA	-3	-61	combination_of_known_junctions	FALSE	canonical	2	2	junction_7	25.7984946628637	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTTATTATGAGCATTTT	5	True	NA	7	True	ACTAAA	-29	NA	18322143	18278736	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_18279943_18281949_18282221_18283794_18283902_18285345_18285460_18286590_18286711_18287534_18287691_18287892_18288014_18295019_18295170_18295998_18296123_18296797_18296985_18297558_18297718_18298791_18298971_18300827_18300917_18305421_18305494_18306134_18306348_18308945_18309080_18310740_18310934_18311386_18311452_18311913_18312025_18321945
H1_mix_00017146	chr11	-	4256	11	FSM	ENSG00000151116.17	ENST00000543987.5	2503	11	41	-1794	0	202	multi-exon	FALSE	canonical	2	3	junction_1	16.7275222313408	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCTGGACTCAAACTTTT	7	True	NA	NA	False	TTTAAA	-38	NA	18588705	18529406	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_18532488_18536405_18536470_18544622_18544797_18546879_18547051_18558227_18558331_18564891_18565011_18566346_18566483_18570213_18570378_18575346_18575413_18578723_18578809_18588612
H1_mix_00017147	chr11	-	532	1	FSM	ENSG00000256282.2	ENST00000540985.1	943	1	472	-61	472	61	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATTATCTCAGGATATCT	3595	False	NA	NA	False	TTTAAA	-43	NA	18596099	18595567	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_18595600_18596100
H1_mix_00017148	chr11	-	3129	1	FSM	ENSG00000270607.1	ENST00000603468.1	1686	1	-1456	13	-1456	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGAATTAGGAGCTGTGT	1357	False	NA	NA	False	AATAAA	-4	NA	19714075	19710946	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_19710900_19714100
H1_mix_00017149	chr11	-	510	2	FSM	ENSG00000255372.1	ENST00000526935.1	516	2	2	4	2	-4	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACCCAGTCTCAGGTAGT	NA	False	NA	NA	False	ATTAAA	-17	NA	22262254	22261212	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_22261637_22262168
H1_mix_00017150	chr11	-	1475	7	NNC	ENSG00000109881.17	novel	1452	6	NA	NA	0	44488	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	120.973481942669	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAACAGAACACAATAAAA	7	True	NA	NA	False	NA	NA	NA	27363215	27286338	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_27286366_27338515_27339036_27340695_27340838_27341391_27341551_27350331_27350440_27357402_27357542_27362835
H1_mix_00017151	chr11	-	2036	1	Intergenic	novelGene_236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATTCTCTTGTACCACTG	NA	False	NA	-11	True	TTTAAA	-35	NA	27616314	27614278	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_-_27614300_27616300
H1_mix_00017152	chr11	-	6834	4	NNC	ENSG00000254934.5	novel	786	3	NA	NA	1	3318	at_least_one_novel_splicesite	FALSE	canonical	3	156	junction_2	640.097388423564	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCTTAAAATAGCCAATGA	1204	False	NA	34	True	AATAAA	-18	NA	27634521	27614307	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_27618024_27618111_27618183_27621289_27624146_27634330
H1_mix_00017153	chr11	-	932	5	NNC	ENSG00000254934.5	novel	786	3	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	156	junction_2	594.806060829915	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGTCTTTAATATTTTT	1204	False	NA	-32	True	AATAAA	-16	NA	27634521	27617625	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_27618024_27618111_27618183_27621289_27621366_27623949_27624146_27634330
H1_mix_00017154	chr11	-	861	4	NNC	ENSG00000254934.5	novel	786	3	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_1	692.431946114562	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGTCTTTAATATTTTT	1204	False	NA	-32	True	AATAAA	-16	NA	27634521	27617625	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_27618024_27621289_27621366_27623949_27624146_27634330
H1_mix_00017155	chr11	-	543	5	NIC	ENSG00000148950.11	novel	1905	9	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_4	147.262520690093	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAGTTGTTTTTAATTG	21	True	NA	-39	True	AATAAA	-15	NA	31509590	31432400	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_31432569_31433459_31433571_31463171_31463306_31469739_31469798_31509518
H1_mix_00017156	chr11	-	2717	13	FSM	ENSG00000007372.25	ENST00000640610.1	2730	13	13	0	4	0	multi-exon	TRUE	canonical	1	3	junction_12	2.98491578142872	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGGTGTTACAAATTTTA	7	True	NA	97	True	NA	NA	NA	31811318	31788907	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_31790020_31790709_31790861_31793437_31793554_31793651_31793803_31794031_31794115_31794629_31794789_31800690_31800857_31801560_31801777_31802703_31802835_31806401_31806463_31806848_31806926_31810827_31811016_31811212
H1_mix_00017157	chr11	-	2622	12	FSM	ENSG00000007372.25	ENST00000639916.1	2622	12	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_8	2.45959077426703	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGTGTTTTGAAGTTGT	3	True	NA	-21	True	ATTAAA	-22	NA	31811144	31789025	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_31790020_31790709_31790861_31793437_31793554_31793651_31793803_31794031_31794115_31794629_31794789_31800690_31800857_31801560_31801777_31802703_31802835_31806401_31806463_31806848_31806926_31810827
H1_mix_00017158	chr11	-	3030	10	FSM	ENSG00000184937.16	ENST00000452863.10	3031	10	0	1	0	-1	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGCAAGATTCCATCAGC	0	True	NA	NA	False	ATTAAA	-17	NA	32435539	32387775	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_32389180_32391971_32392065_32392665_32392756_32396256_32396408_32399947_32400045_32416489_32416541_32417576_32417655_32427955_32428059_32428496_32428620_32434699
H1_mix_00017159	chr11	-	571	4	FSM	ENSG00000284969.1	ENST00000534312.5	572	4	0	1	0	0	multi-exon	FALSE	canonical	0	0	junction_1	225.779144790262	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCATGGTCTCTCTCCTC	495	False	NA	NA	False	NA	NA	NA	33722456	33698261	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_33698515_33710205_33710344_33717369_33717472_33722378
H1_mix_00017160	chr11	-	264	3	FSM	ENSG00000135363.12	ENST00000493667.1	390	3	126	0	-91	0	multi-exon	FALSE	canonical	2	2	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCGGAGCGCCGGAGCAAG	151	False	NA	NA	False	NA	NA	NA	33870403	33869544	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_33869587_33869824_33869988_33870344
H1_mix_00017161	chr11	-	436	1	FSM	ENSG00000254708.1	ENST00000531489.1	886	1	353	97	353	-97	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTCGTCATAGTCTCTGG	439	False	NA	NA	False	NA	NA	NA	34335650	34335214	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_34335200_34335600
H1_mix_00017162	chr11	-	358	3	FSM	ENSG00000110436.13	ENST00000645659.1	468	3	0	110	0	-110	multi-exon	FALSE	canonical	1	1	junction_1	0.5	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTCGAAATCTCTTCCC	NA	False	NA	NA	False	NA	NA	NA	35317381	35312248	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_35312449_35315022_35315176_35317376
H1_mix_00017163	chr11	-	2760	12	NNC	ENSG00000149090.13	novel	2723	11	NA	NA	0	11719	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	33.9111625006982	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGGAGCTGCATTAATAT	4604	False	NA	NA	False	NA	NA	NA	35525603	35420103	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_35420154_35431826_35432893_35434511_35434805_35435902_35436136_35439626_35439694_35441480_35441694_35468000_35468109_35470600_35470819_35474629_35474745_35492044_35492174_35494095_35494273_35525512
H1_mix_00017164	chr11	-	2801	9	FSM	ENSG00000149090.13	ENST00000615849.4	2801	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	36.3625408215653	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAATGTGCTATGCTC	1	True	NA	NA	False	AATAAA	-24	NA	35526031	35431830	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_35432893_35434511_35434805_35435902_35436136_35439626_35439694_35441480_35441694_35468000_35468109_35492044_35492174_35494095_35494273_35525512
H1_mix_00017165	chr11	-	1667	1	FSM	ENSG00000254672.1	ENST00000529830.1	1667	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAGGAAGAAAACAGGAAA	NA	False	NA	NA	False	NA	NA	NA	35968676	35967009	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_35967000_35968700
H1_mix_00017166	chr11	-	8957	10	FSM	ENSG00000135365.17	ENST00000527401.5	8954	10	2	-5	2	1	multi-exon	FALSE	canonical	3	61	junction_7	19.6192145675334	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCATGGTGTTGGGTTTGG	NA	False	NA	-2	True	AATAAA	-20	NA	45971367	45929317	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_45935740_45936493_45936570_45938156_45938313_45945839_45946004_45948885_45948947_45949401_45949482_45950205_45950258_45953526_45953626_45965314_45965609_45969814
H1_mix_00017167	chr11	-	4606	17	NNC	ENSG00000110497.15	novel	4817	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_9	29.5570819559374	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGCTCCTCTCTCTTAT	11	True	NA	-6	True	ATTAAA	-18	NA	46594021	46396413	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_46397944_46408512_46408707_46410275_46410369_46417912_46418053_46433473_46433629_46434848_46435038_46443487_46443599_46493607_46493709_46494123_46494205_46541944_46542982_46543251_46543399_46543974_46544042_46545603_46545777_46547112_46547297_46547816_46547876_46548245_46548501_46593931
H1_mix_00017168	chr11	-	4712	17	NIC	ENSG00000110497.15	novel	4817	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_9	24.2705293257069	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGCTCCTCTCTCTTAT	9	True	NA	-6	True	ATTAAA	-18	NA	46594023	46396413	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_46397944_46408512_46408707_46410275_46410369_46417912_46418053_46433473_46433629_46434848_46435038_46443487_46443599_46493607_46493709_46494123_46494205_46541944_46542982_46543251_46543399_46543974_46544042_46545603_46545777_46547112_46547297_46547816_46547876_46548245_46548501_46593827
H1_mix_00017169	chr11	-	763	1	FSM	ENSG00000244313.3	ENST00000467930.1	498	1	-202	-63	-202	63	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGAAGAAGTGGA	NA	False	NA	3	True	AATAAA	-33	NA	46429352	46428589	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_46428600_46429400
H1_mix_00017170	chr11	-	582	4	FSM	ENSG00000175216.15	ENST00000526496.1	582	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	497.916324965015	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGTAAGACTTTGTTTT	12	True	NA	NA	False	NA	NA	NA	46826853	46816202	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_46816405_46818309_46818504_46821174_46821269_46826761
H1_mix_00017171	chr11	-	7824	37	NIC	ENSG00000134569.10	novel	8155	38	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_36	13.4350288425444	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTTGCCTGGCTTGGAG	3	True	NA	-8	True	TATAAA	-16	NA	46918550	46856869	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_46859316_46862605_46862748_46864447_46864536_46865118_46865187_46867978_46868115_46868599_46868714_46868987_46869133_46871524_46871634_46873099_46873235_46873374_46873594_46874799_46875104_46875455_46875682_46875803_46875967_46876465_46876638_46876743_46876831_46877198_46877340_46878906_46879039_46879125_46879316_46881701_46881904_46883870_46883977_46886090_46886173_46886324_46886503_46889410_46889534_46889943_46890121_46890276_46890495_46892972_46893130_46894588_46894820_46895165_46895292_46895883_46896019_46896209_46896336_46896868_46896995_46898557_46898678_46898903_46899033_46899386_46899504_46899862_46899977_46900261_46900379_46918327
H1_mix_00017175	chr11	-	1894	11	FSM	ENSG00000165912.16	ENST00000539589.5	2009	11	115	0	115	0	multi-exon	FALSE	canonical	1	1	junction_10	148.267494751884	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAAACAAAAACACCACT	1219	False	NA	-23	True	ATTAAA	-20	NA	47185766	47177539	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47178047_47178365_47178488_47178893_47179031_47179158_47179280_47179410_47179587_47180185_47180342_47180454_47180691_47182402_47182560_47182673_47182765_47183003_47183070_47185641
H1_mix_00017176	chr11	-	470	1	FSM	ENSG00000243802.2	ENST00000473109.2	362	1	-108	0	-108	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAACAATTTTAATAAATTG	NA	False	NA	NA	False	NA	NA	NA	47191650	47191180	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47191200_47191600
H1_mix_00017177	chr11	-	8111	17	NNC	ENSG00000149187.19	novel	3650	16	NA	NA	-57	37106	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	191.502937314288	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGCCAAGGGCTTATACT	NA	False	NA	NA	False	NA	NA	NA	47553189	47428826	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_47428852_47465936_47472103_47472190_47472358_47473087_47473232_47475335_47475522_47476845_47476957_47477296_47477426_47478876_47478941_47482694_47482857_47483452_47483533_47484388_47484524_47486749_47486799_47487158_47487242_47488836_47489025_47499452_47499605_47500860_47500933_47552991
H1_mix_00017178	chr11	-	4647	14	NIC	ENSG00000149187.19	novel	4583	14	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	3	199	junction_1	115.886447175903	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGAACTGATGTCTTCAG	NA	False	NA	-11	True	ATTAAA	-8	NA	47553189	47465943	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_47468892_47472190_47472358_47473087_47473232_47475335_47475522_47476845_47476960_47477296_47477426_47478876_47478941_47482694_47482857_47483452_47483533_47484388_47484524_47486749_47486799_47487158_47487242_47488836_47489025_47552991
H1_mix_00017179	chr11	-	9864	5	NIC	ENSG00000149187.19	novel	7666	13	NA	NA	-2630	-8	intron_retention	FALSE	canonical	3	278	junction_4	82.0152424857721	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTTTGAGAAGAACTGAT	8639	False	NA	-19	True	NA	NA	NA	47480313	47465951	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_47472358_47473087_47473232_47475335_47475522_47476845_47476957_47477296
H1_mix_00017181	chr11	-	2321	15	NIC	ENSG00000149187.19	novel	4583	14	NA	NA	61	-2	combination_of_known_splicesites	FALSE	canonical	3	33	junction_14	165.070315876821	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCCTTTCCTTTTTGAC	104	False	NA	NA	False	NA	NA	NA	47553056	47468285	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_47468892_47472190_47472358_47473087_47473232_47475335_47475522_47476845_47476957_47477296_47477426_47478876_47478941_47482694_47482857_47483452_47483533_47484388_47484524_47486749_47486799_47487158_47487242_47488836_47489025_47499452_47499605_47552991
H1_mix_00017183	chr11	-	2333	16	NIC	ENSG00000149187.19	novel	8132	15	NA	NA	3	-8	combination_of_known_junctions	FALSE	canonical	2	25	junction_10	188.582596109916	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTGAGGCTCCTGAGCA	-1	True	NA	NA	False	AATAAA	-14	NA	47553114	47468400	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_47468892_47472190_47472358_47473087_47473232_47475335_47475522_47476845_47476957_47477296_47477426_47478876_47478941_47482694_47482857_47483452_47483533_47484388_47484521_47486749_47486799_47487158_47487242_47488836_47489025_47499452_47499605_47500860_47500933_47552991
H1_mix_00017184	chr11	-	3781	14	NIC	ENSG00000149187.19	novel	4583	14	NA	NA	0	-9	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	144.928343853337	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTCTGAGGCTCCTGAGC	43	False	NA	NA	False	AATAAA	-13	NA	47553117	47468401	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_47470556_47472190_47472358_47473087_47473232_47475335_47475522_47476845_47476960_47477296_47477426_47478876_47478941_47482694_47482857_47483452_47483533_47484388_47484524_47486749_47486799_47487158_47487242_47488836_47489025_47552991
H1_mix_00017185	chr11	-	3468	15	NNC	ENSG00000149187.19	novel	3650	16	NA	NA	39	-37	intron_retention	FALSE	canonical	2	9	junction_3	187.382194284019	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAGGGTCATGATGGGAT	82	False	NA	NA	False	GATAAA	-15	NA	47553078	47470365	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_47472103_47472190_47472358_47473087_47473226_47475335_47475522_47476845_47476957_47477296_47477426_47478876_47478941_47482694_47482857_47483452_47483533_47484388_47484524_47486749_47486799_47487158_47487242_47488836_47489025_47499452_47499605_47552991
H1_mix_00017186	chr11	-	2988	13	NNC	ENSG00000109920.13	novel	4035	17	NA	NA	0	58772	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	70.9688898978513	3468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCATTGAGCAGTGATTT	NA	False	NA	NA	False	NA	NA	NA	47746199	47657721	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_47657750_47716517_47717513_47719928_47720087_47722975_47723317_47724027_47724173_47724467_47724779_47731373_47731562_47732116_47732220_47732536_47732671_47734024_47734130_47736615_47736741_47743952_47744164_47746055
H1_mix_00017187	chr11	-	4060	18	NNC	ENSG00000109920.13	novel	4035	17	NA	NA	6	-23	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_17	54.6272046501491	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTATCCTTTTGCTCGT	4	True	NA	-32	True	AATAAA	-20	NA	47767280	47716516	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_47717513_47719928_47720087_47722975_47723317_47724027_47724173_47724467_47724779_47731373_47731562_47732116_47732220_47732536_47732671_47734024_47734130_47736615_47736741_47743952_47744164_47746055_47746395_47750915_47751037_47751142_47751291_47752915_47753103_47754527_47754665_47765269_47765363_47767062
H1_mix_00017188	chr11	-	673	4	FSM	ENSG00000109920.13	ENST00000526109.6	673	4	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_2	94.6337971105226	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAATTGCTTTGACCATG	NA	False	NA	NA	False	NA	NA	NA	47724551	47717226	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_47717513_47719928_47720087_47724027_47724173_47724467
H1_mix_00017189	chr11	-	1724	2	FSM	ENSG00000134817.12	ENST00000257254.3	1726	2	0	2	0	-2	multi-exon	FALSE	canonical	1	1	junction_1	0	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCTCTTCTCATGAAAGT	-11	True	NA	8	True	AATAAA	-26	NA	57237235	57233578	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_57233859_57235791
H1_mix_00017190	chr11	-	2586	14	NNC	ENSG00000134802.18	novel	2619	14	NA	NA	0	64805	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	45.7745956778152	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGGGCAGCCCAACAGTT	6248	False	NA	NA	False	NA	NA	NA	57426652	57342148	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_57342176_57406953_57407897_57409174_57409299_57409934_57410122_57414614_57414732_57414932_57415107_57416572_57416671_57417747_57417888_57420971_57421065_57421296_57421374_57423981_57424029_57425540_57425671_57425988_57426353_57426587
H1_mix_00017191	chr11	-	2641	13	NIC	ENSG00000134802.18	novel	2619	14	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	47.0661473059164	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGTTTCCATCTCTCTA	5868	False	NA	-1	True	AATAAA	-20	NA	57427032	57406953	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_57407897_57409174_57409299_57409934_57410122_57414614_57414732_57414932_57415107_57416572_57416671_57417747_57417888_57420971_57421065_57421296_57421374_57423981_57424029_57425540_57425671_57425988_57426353_57426885
H1_mix_00017192	chr11	-	560	4	FSM	ENSG00000134802.18	ENST00000529494.5	560	4	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_3	72.7873615403114	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGAGTGCTGTCAGGTG	-9	True	NA	NA	False	NA	NA	NA	57427119	57423984	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_57424029_57425540_57425671_57425988_57426317_57427061
H1_mix_00017193	chr11	-	2567	15	NIC	ENSG00000149150.9	novel	2514	15	NA	NA	275	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_14	32.3694394799307	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTGGTGTGCGCCTGTC	318	False	NA	-5	True	AATAAA	-16	NA	57515411	57484533	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_57485243_57487094_57487219_57488915_57488990_57489250_57489393_57491223_57491363_57491590_57491627_57491715_57491863_57493992_57494172_57496030_57496165_57497752_57497846_57500778_57500856_57500987_57501044_57501151_57501330_57513957_57514125_57515099
H1_mix_00017194	chr11	-	2494	15	NIC	ENSG00000149150.9	novel	2514	15	NA	NA	49	0	combination_of_known_junctions	TRUE	canonical	3	32	junction_13	29.2940754614795	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTGGTGTGCGCCTGTC	92	False	NA	-5	True	AATAAA	-16	NA	57515637	57484533	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_57485243_57487094_57487219_57488915_57488990_57489250_57489393_57491223_57491363_57491590_57491627_57491715_57491863_57493992_57494172_57496030_57496165_57497752_57497846_57500778_57500856_57500987_57501044_57501151_57501375_57513957_57514125_57515443
H1_mix_00017195	chr11	-	281	1	FSM	ENSG00000265566.2	ENST00000577229.2	281	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGTAAGACAGCTTA	2972	False	NA	NA	False	NA	NA	NA	57528365	57528084	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_57528100_57528400
H1_mix_00017196	chr11	-	300	1	ISM	ENSG00000166793.13	ENST00000528797.5	1912	4	932	1259	871	376	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGACATTTTCTGTGAGA	3296	False	NA	NA	False	GGGGCT	-10	NA	57646645	57646345	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_57646300_57646600
H1_mix_00017197	chr11	-	1683	8	FSM	ENSG00000110031.13	ENST00000528489.1	1751	8	68	0	14	0	multi-exon	FALSE	canonical	1	1	junction_7	4.20883424647321	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTGGCTCACTGTCTTA	-18	True	NA	NA	False	NA	NA	NA	58578152	58527038	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_58527724_58528042_58528192_58549785_58549868_58549972_58550147_58551064_58551233_58554840_58554941_58570555_58570714_58577985
H1_mix_00017198	chr11	-	1280	6	FSM	ENSG00000156689.7	ENST00000287275.6	1560	6	222	58	44	-26	multi-exon	FALSE	canonical	1	1	junction_5	1.62480768092719	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGAAAAAATTCACTTTT	221	False	NA	-61	True	AATGAA	-12	NA	58844482	58834122	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_58834838_58837014_58837178_58837270_58837398_58838260_58838369_58839534_58839653_58844433
H1_mix_00017199	chr11	-	1771	4	NNC	ENSG00000156689.7	novel	566	5	NA	NA	-1657	-60185	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	1.24721912892465	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAAGTTCCCGAGTTTAT	NA	False	NA	-4	True	AATATA	-16	NA	58905872	58894914	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_58895627_58899651_58899759_58904155_58904262_58905026
H1_mix_00017200	chr11	-	324	1	FSM	ENSG00000255381.1	ENST00000529891.1	490	1	53	113	53	-113	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTGTTGGTAACTACAAA	NA	False	NA	NA	False	TATAAA	-16	NA	59142557	59142233	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_59142200_59142600
H1_mix_00017201	chr11	-	4132	18	NIC	ENSG00000166889.14	novel	4129	19	NA	NA	-93	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_12	20.0647740009536	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCCTGCATTTCTACT	414	False	NA	-2	True	AATAAA	-22	NA	59669130	59636715	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_59638412_59639047_59639198_59639291_59639384_59642879_59643036_59647753_59647914_59649461_59649611_59650753_59650814_59651543_59651642_59652463_59652588_59652837_59653019_59653982_59654073_59655522_59655741_59656498_59656601_59657529_59657725_59658865_59658947_59659251_59659470_59666852_59666965_59668880
H1_mix_00017205	chr11	-	3348	18	NIC	ENSG00000167992.14	novel	3536	20	NA	NA	6	-2	combination_of_known_splicesites	FALSE	canonical	3	8	junction_4	12.0672854098438	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTGCACTGCTCATTCA	3	True	NA	-5	True	ATTAAA	-18	NA	61295310	61258287	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_61259313_61264486_61264578_61264955_61265039_61265121_61265213_61271674_61271761_61273198_61273317_61274498_61274585_61276592_61276681_61278393_61278477_61280623_61280718_61280792_61281236_61281785_61281915_61282788_61282906_61286313_61286431_61290798_61290928_61291263_61291354_61291481_61291577_61294927
H1_mix_00017207	chr11	-	1224	4	FSM	ENSG00000167986.15	ENST00000451943.6	1224	4	0	0	0	0	multi-exon	FALSE	canonical	2	1425	junction_2	369.172347586086	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCTTTTGTCTCTGCAAA	NA	False	NA	NA	False	NA	NA	NA	61302914	61299555	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61300220_61300808_61300933_61302256_61302360_61302581
H1_mix_00017208	chr11	-	1593	2	FSM	ENSG00000167986.15	ENST00000538129.1	475	2	135	-1253	135	1253	multi-exon	FALSE	canonical	3	2170	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAGGCTGGTTGTTCTAA	3727	False	NA	NA	False	ATTAAA	-20	NA	61330074	61328108	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61329585_61329957
H1_mix_00017210	chr11	-	3321	8	NIC	ENSG00000149532.16	novel	3487	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	61	junction_6	130.8619774528	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTATACTGCATTGTAT	1	True	NA	-19	True	AATAAA	-18	NA	61429290	61402728	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_61404705_61410937_61411106_61411768_61411938_61415665_61415785_61416104_61416520_61419948_61420095_61421389_61421609_61429181
H1_mix_00017211	chr11	-	395	3	FSM	ENSG00000134825.16	ENST00000535297.1	395	3	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	2766.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTCTGGGGCCCATTC	-16	True	NA	-8	True	AATAAA	-16	NA	61792616	61789129	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61789236_61790374_61790603_61792555
H1_mix_00017212	chr11	-	4264	13	Fusion	ENSG00000289268.1_ENSG00000149485.19	novel	4364	12	NA	NA	20	-439	multi-exon	TRUE	non_canonical	0	0	junction_1	297.365469115401	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACTACTGGTCTTCAG	579	False	NA	-14	True	ATTAAA	-6	NA	61816582	61797862	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr11_-_61798182_61799624_61802463_61802800_61802927_61803031_61803112_61803362_61803460_61803669_61803768_61804684_61804762_61806663_61806725_61810750_61810880_61810973_61811076_61812470_61812669_61813242_61813354_61816554
H1_mix_00017214	chr11	-	1899	13	NNC	ENSG00000221968.9	novel	1790	12	NA	NA	-79	28488	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	128.930294474702	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCACTTCTGGCTTTAATG	6005	False	NA	NA	False	NA	NA	NA	61891624	61845030	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_61845064_61873528_61873866_61875850_61875977_61876110_61876191_61876358_61876456_61876865_61876964_61877510_61877588_61878154_61878216_61878511_61878635_61878745_61878848_61879311_61879510_61880040_61880152_61891168
H1_mix_00017215	chr11	-	493	2	FSM	ENSG00000167996.16	ENST00000529631.5	507	2	0	14	0	-14	multi-exon	FALSE	canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAATCCTGTGAGTGAA	4	True	NA	NA	False	NA	NA	NA	61967631	61959731	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_61959905_61967311
H1_mix_00017216	chr11	-	531	3	NNC	ENSG00000124942.14	novel	793	3	NA	NA	12113	-2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	1.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTTGTGTCAACCTTTG	NA	False	NA	-3	True	AATAAA	-16	NA	62505244	62433543	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_62433892_62491731_62491832_62505161
H1_mix_00017217	chr11	-	10528	1	ISM	ENSG00000124942.14	ENST00000378024.9	18761	5	20377	0	-9072	0	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGTGCCTTTGCATTC	8644	False	NA	-1	True	AATAAA	-19	NA	62526429	62515901	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_62515900_62526400
H1_mix_00017218	chr11	-	1566	9	NNC	ENSG00000149016.16	novel	2826	9	NA	NA	16	-2	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	77.9354701018734	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTAATACAGTCTCCCG	9	True	NA	NA	False	AATAAA	-9	NA	62591507	62575059	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_62575130_62576656_62576750_62576906_62577018_62577181_62577292_62578560_62579031_62581105_62581207_62581385_62581702_62589030_62589222_62591403
H1_mix_00017219	chr11	-	563	3	FSM	ENSG00000149480.7	ENST00000531261.1	563	3	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	14.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTACCCCAGGGAGGCCC	5110	False	NA	NA	False	NA	NA	NA	62598129	62596765	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62596826_62597315_62597713_62598023
H1_mix_00017220	chr11	-	3652	21	FSM	ENSG00000149499.12	ENST00000494448.5	3665	21	21	-8	16	0	multi-exon	FALSE	canonical	1	1	junction_19	34.3867343607968	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCGGTGCTTTTGTGGGG	9797	False	NA	-2	True	AATAAA	-17	NA	62612360	62602217	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62602679_62602758_62602890_62603148_62603248_62603728_62603817_62603943_62604042_62604112_62604202_62605112_62605181_62605641_62605774_62605854_62605981_62606062_62606215_62606957_62607100_62607665_62607822_62608200_62608297_62608541_62608653_62608735_62608806_62608961_62609133_62609353_62609478_62609628_62609697_62610878_62610955_62611086_62611345_62611424
H1_mix_00017223	chr11	-	1320	7	FSM	ENSG00000162194.13	ENST00000354588.8	1818	7	498	0	-4	0	multi-exon	TRUE	canonical	1	1	junction_6	1179.99681025934	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTGTGATTAAATGTA	-2	True	NA	-1	True	AATAAA	-16	NA	62671769	62662816	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62663160_62663235_62663334_62664848_62664974_62667522_62667748_62669640_62669804_62669881_62670042_62671563
H1_mix_00017224	chr11	-	1508	7	FSM	ENSG00000162194.13	ENST00000532208.5	1508	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	1179.75695472509	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCATTTGTAATAAAGCCC	7735	False	NA	-32	True	AAGAAA	-30	NA	62671540	62662847	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62663160_62663235_62663334_62664848_62664974_62667522_62667748_62669640_62669804_62669881_62670166_62671239
H1_mix_00017227	chr11	-	2293	7	FSM	ENSG00000168000.16	ENST00000684609.1	2315	7	39	-17	-30	0	multi-exon	FALSE	canonical	3	171	junction_6	92.193184852967	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCAGCACTTTCCCACCT	3	True	NA	-107	True	AAGAAA	-18	NA	62707548	62690344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62707108
H1_mix_00017228	chr11	-	1224	1	NIC	ENSG00000185670.9	novel	490	2	NA	NA	2557	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTCCTAATTTTATTTAT	8558	False	NA	-4	True	AATAAA	-21	NA	62749542	62748318	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_62748300_62749500
H1_mix_00017229	chr11	-	2239	21	NIC	ENSG00000162231.14	novel	2290	21	NA	NA	11	2	combination_of_known_junctions	FALSE	canonical	3	29	junction_3	34.7456472093988	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGTTCTGCGTGCTGGAT	9	True	NA	-8	True	TATAAA	-16	NA	62805429	62792127	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_62792515_62792640_62792702_62794257_62794399_62794934_62795008_62795900_62795944_62796065_62796182_62796286_62796346_62796459_62796568_62797182_62797239_62797317_62797387_62798538_62798576_62800376_62800487_62801093_62801202_62801328_62801418_62801561_62801632_62801738_62801820_62801941_62802047_62802176_62802261_62803418_62803573_62803791_62803979_62805328
H1_mix_00017231	chr11	-	1799	12	NIC	ENSG00000133316.16	novel	1724	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_11	156.519689570164	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGACCCTGAGCCTTTTG	1429	False	NA	-6	True	AATAAA	-15	NA	62840380	62832910	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_62833132_62833617_62833675_62833791_62833938_62834275_62834332_62834426_62834528_62835430_62835533_62835694_62835842_62835960_62836037_62839113_62839236_62839321_62839429_62839506_62839868_62840077
H1_mix_00017233	chr11	-	2079	8	FSM	ENSG00000255717.8	ENST00000541416.6	2078	8	0	-1	0	0	multi-exon	FALSE	canonical	3	148	junction_7	29.4223294351035	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTTACTTTTTTTGTG	68	False	NA	-22	True	AATAAA	-17	NA	62855812	62851986	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62854552_62854887_62854939_62855132_62855217_62855423
H1_mix_00017234	chr11	-	2339	7	FSM	ENSG00000255717.8	ENST00000661616.1	2336	7	0	-3	0	0	multi-exon	FALSE	canonical	3	148	junction_6	26.8850433430105	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTTACTTTTTTTGTG	43	False	NA	-22	True	AATAAA	-17	NA	62855837	62851986	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62852682_62852810_62853116_62853551_62853591_62853800_62854552_62854887_62854939_62855132_62855217_62855423
H1_mix_00017235	chr11	-	3886	1	FSM	ENSG00000255717.8	ENST00000668048.1	1158	1	-2727	-1	-5	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTTACTTTTTTTGTG	8	True	NA	-22	True	AATAAA	-17	NA	62855872	62851986	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62852000_62855900
H1_mix_00017236	chr11	-	2157	8	FSM	ENSG00000255717.8	ENST00000656589.1	2152	8	1	-6	0	0	multi-exon	FALSE	canonical	3	84	junction_7	47.0501252465313	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGATGAAAATAATAAAATG	-5	True	NA	-55	True	NA	NA	NA	62855885	62852019	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_62852682_62852810_62852840_62853074_62853591_62853800_62854552_62854887_62854939_62855132_62855217_62855423_62855467_62855864
H1_mix_00017239	chr11	-	3081	5	ISM	ENSG00000168004.10	ENST00000540857.6	3042	6	511	3	-124	-3	3prime_fragment	FALSE	canonical	3	49	junction_3	14.1950695665784	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGTGCTTATTTTTCA	1123	False	NA	-5	True	ATTAAA	-13	NA	63490656	63461406	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_63463596_63466109_63466373_63468356_63468466_63488870_63488977_63490242
H1_mix_00017240	chr11	-	5273	4	NNC	ENSG00000188070.9	novel	827	4	NA	NA	0	35718	intron_retention	TRUE	non_canonical	0	0	junction_1	8.05536398239638	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTCCTAAAAACAAGATT	3267	False	NA	NA	False	NA	NA	NA	63765962	63724173	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_63724201_63759895_63764599_63764867_63765255_63765806
H1_mix_00017241	chr11	-	899	4	FSM	ENSG00000133315.12	ENST00000545464.5	899	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	110.671686633132	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCCAGGAAGCACATGGGG	19	True	NA	NA	False	NA	NA	NA	64166106	64000073	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64000344_64151238_64151356_64152291_64152394_64165696
H1_mix_00017243	chr11	-	538	5	NNC	ENSG00000173113.7	novel	812	4	NA	NA	0	5925	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1867.03843024186	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCAGGAGCAGTGGCTCA	586	False	NA	NA	False	NA	NA	NA	64317487	64310534	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_64310563_64316689_64316969_64317057_64317148_64317263_64317366_64317448
H1_mix_00017244	chr11	-	444	4	FSM	ENSG00000068831.19	ENST00000394428.5	444	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	97.3527377917825	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGAGGGTCATGTTGCT	9557	False	NA	-2	True	AATAAA	-17	NA	64742937	64740865	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64741080_64741438_64741502_64742009_64742033_64742793
H1_mix_00017245	chr11	-	2741	31	NIC	ENSG00000168067.12	novel	7147	32	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_23	20.4588747382537	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTCTGGTCCCTCTGGGT	29	True	NA	-40	True	ATTAAA	-15	NA	64803159	64789136	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_64789625_64789729_64789786_64789888_64789960_64790187_64790275_64790393_64790463_64791908_64792087_64792171_64792276_64792363_64792423_64796272_64796391_64796492_64796554_64796633_64796714_64796808_64796894_64796981_64797024_64797103_64797193_64797274_64797381_64797500_64797535_64797625_64797665_64798793_64798838_64799420_64799480_64799604_64799684_64800108_64800217_64800310_64800393_64800763_64800827_64801110_64801184_64801578_64801622_64801709_64801758_64802065_64802122_64802418_64802484_64802562_64802654_64802884_64802943_64803053
H1_mix_00017246	chr11	-	2802	31	NIC	ENSG00000168067.12	novel	7147	32	NA	NA	3	-2	combination_of_known_splicesites	FALSE	canonical	2	2	junction_4	21.0815611903441	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTCCTCTGGTCCCTCTGG	29	True	NA	-42	True	ATTAAA	-13	NA	64803159	64789138	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_64789625_64789729_64789786_64789888_64789960_64790187_64790275_64791908_64792087_64792171_64792276_64792363_64792423_64796272_64796391_64796492_64796554_64796633_64796714_64796808_64796894_64796981_64797024_64797103_64797193_64797274_64797381_64797500_64797535_64797625_64797665_64798793_64798838_64799420_64799480_64799604_64799684_64800108_64800217_64800310_64800393_64800763_64800827_64800899_64801032_64801110_64801184_64801578_64801622_64801709_64801758_64802065_64802122_64802418_64802484_64802562_64802654_64802884_64802943_64803053
H1_mix_00017249	chr11	-	2921	9	NIC	ENSG00000133895.18	novel	2800	11	NA	NA	103	0	intron_retention	FALSE	canonical	3	20	junction_3	150.05826993205	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCAAGTCCATGTTTATCT	704	False	NA	-10	True	TATAAA	-1	NA	64810029	64803509	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_64804817_64805033_64805199_64805634_64805771_64805887_64806369_64807010_64807099_64807178_64807220_64807551_64807681_64807890_64808100_64809664
H1_mix_00017250	chr11	-	2737	10	FSM	ENSG00000133895.18	ENST00000312049.11	2731	10	0	-6	0	0	multi-exon	FALSE	canonical	0	0	junction_9	147.903455330717	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCAAGTCCATGTTTATCT	1	True	NA	-10	True	TATAAA	-1	NA	64810686	64803509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_64804817_64805033_64805199_64805634_64805771_64806231_64806369_64807010_64807099_64807178_64807220_64807551_64807681_64807890_64808100_64809664_64810133_64810629
H1_mix_00017252	chr11	-	3147	16	FSM	ENSG00000162298.19	ENST00000526060.5	3144	16	0	-3	0	0	multi-exon	FALSE	canonical	2	5	junction_15	45.0824429979861	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGGGGTTTGTGTCACA	560	False	NA	-29	True	AATAAA	-16	NA	65134429	65127278	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65128489_65128562_65128715_65129728_65129916_65130001_65130173_65130250_65130380_65130659_65130824_65130919_65131037_65131131_65131198_65131273_65131374_65131469_65131597_65132247_65132352_65132731_65132781_65132921_65133075_65133159_65133253_65133469_65133619_65134253
H1_mix_00017256	chr11	-	664	5	FSM	ENSG00000173327.8	ENST00000534432.1	664	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	122.248466248047	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATCCCTGTGGGCCAGCGG	9825	False	NA	NA	False	NA	NA	NA	65606758	65599450	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65599769_65605592_65605643_65605760_65605853_65605945_65606082_65606690
H1_mix_00017257	chr11	-	2085	5	FSM	ENSG00000172922.11	ENST00000531596.6	2085	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	156.160774524206	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATTTAACCAATAAAATTT	11	True	NA	-41	True	NA	NA	NA	65720798	65717708	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65719157_65719680_65719810_65720044_65720165_65720241_65720418_65720586
H1_mix_00017259	chr11	-	1153	5	NNC	ENSG00000172757.13	novel	1245	4	NA	NA	0	15340	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4708.80836173017	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGACAGAGTCTCGTTCTG	0	True	NA	NA	False	NA	NA	NA	65858180	65807681	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_65807715_65854797_65855449_65855653_65855731_65855934_65856243_65858096
H1_mix_00017260	chr11	-	1154	5	NNC	ENSG00000172757.13	novel	1245	4	NA	NA	0	15340	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4708.80836173017	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGACAGAGTCTCGTTCTG	0	True	NA	NA	False	NA	NA	NA	65858180	65807681	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_65807716_65854797_65855449_65855653_65855731_65855934_65856243_65858096
H1_mix_00017262	chr11	-	1427	2	FSM	ENSG00000175592.9	ENST00000448083.6	1427	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGAGACAGTCCTCTGGG	-1	True	NA	NA	False	GGGGCT	-30	NA	65900419	65892048	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_65893297_65900240
H1_mix_00017264	chr11	-	667	2	FSM	ENSG00000174851.16	ENST00000496746.5	667	2	0	0	0	0	multi-exon	FALSE	canonical	3	1221	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTGACCCTTGTTCC	6413	False	NA	-7	True	NA	NA	NA	66285335	66284579	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66284784_66284872
H1_mix_00017265	chr11	-	2475	12	FSM	ENSG00000174669.12	ENST00000540386.5	2474	12	0	-1	0	0	multi-exon	FALSE	canonical	3	33	junction_4	48.5669002681136	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCGTTCACCAAGTCTT	640	False	NA	-34	True	NA	NA	NA	66371820	66362520	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66363548_66364224_66364425_66365935_66366022_66366125_66366192_66366430_66366565_66367463_66367549_66367771_66367870_66368536_66368672_66369059_66369200_66369368_66369533_66371243_66371326_66371562
H1_mix_00017266	chr11	-	2130	5	FSM	ENSG00000174547.13	ENST00000524576.5	2209	5	98	-19	98	14	multi-exon	FALSE	canonical	3	27	junction_4	650.941817676511	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATATTTGGTGTATATCTT	1150	False	NA	-4	True	AATAAA	-39	NA	66466640	66435060	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66436113_66437103_66437264_66437349_66437444_66438163_66438260_66465912
H1_mix_00017268	chr11	-	476	1	FSM	ENSG00000255517.7	ENST00000602951.1	476	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAGGTGTGATTTTTTT	5519	False	NA	NA	False	TATAAA	-32	NA	66474725	66474249	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66474200_66474700
H1_mix_00017269	chr11	-	2193	12	FSM	ENSG00000174080.12	ENST00000527141.6	2207	12	17	-3	17	0	multi-exon	FALSE	canonical	2	3	junction_11	6.09158747918216	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAGAGGTGTCCTTGTC	NA	False	NA	-23	True	NA	NA	NA	66568812	66563487	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_66564008_66564087_66564649_66564741_66564807_66564886_66565007_66565670_66565752_66565830_66565928_66566021_66566168_66566290_66566405_66567245_66567322_66567443_66567663_66567983_66568083_66568717
H1_mix_00017270	chr11	-	4078	5	NNC	ENSG00000173914.12	novel	1806	4	NA	NA	0	827	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	80.1946849859765	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGGCATGGTGGTGCAT	-34	True	NA	NA	False	NA	NA	NA	66677877	66664170	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_66665661_66666271_66666494_66668614_66669292_66675516_66677092_66677763
H1_mix_00017271	chr11	-	2898	4	NNC	ENSG00000173914.12	novel	1806	4	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	81.8141525382715	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATGTTTGTCTTTTTA	19	True	NA	0	True	AATAAA	-22	NA	66677824	66664993	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_66665579_66668614_66669292_66675516_66677092_66677763
H1_mix_00017272	chr11	-	1713	2	FSM	ENSG00000175482.9	ENST00000528087.1	1701	2	0	-12	0	0	multi-exon	FALSE	canonical	3	133	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATCCTGACCTTCAGTC	3	True	NA	-16	True	AATAAA	-13	NA	67353490	67351552	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67353078_67353302
H1_mix_00017273	chr11	-	4465	11	FSM	ENSG00000172725.14	ENST00000616321.4	4464	11	0	-1	0	1	multi-exon	FALSE	canonical	1	1	junction_5	164.894178187103	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTGGTCCTACAGAGAC	-3	True	NA	-1	True	AATAAA	-18	NA	67443484	67435508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67438502_67438670_67438950_67439785_67439844_67440117_67440264_67440334_67440485_67441124_67441245_67441332_67441515_67441732_67441863_67441965_67442089_67442427_67442631_67443403
H1_mix_00017275	chr11	-	858	7	NIC	ENSG00000172663.9	novel	3551	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	186	junction_5	236.772042268508	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGGCAATTGCTCTCCT	15	True	NA	-14	True	AATAAA	-17	NA	67469233	67464357	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_67464697_67464802_67464857_67465055_67465101_67467311_67467389_67467500_67467564_67468027_67468093_67469018
H1_mix_00017276	chr11	-	948	2	ISM	ENSG00000184795.9	ENST00000530315.1	699	3	1983	-438	1983	438	3prime_fragment	FALSE	canonical	3	14	junction_1	0	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACTGTCCTTACTGGGGA	NA	False	NA	-11	True	AATAAA	-8	NA	67714022	67711263	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_67712008_67713818
H1_mix_00017277	chr11	-	966	1	FSM	ENSG00000285537.1	ENST00000532901.1	952	1	0	-14	0	14	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAATATCTTCTTATCTG	NA	False	NA	NA	False	ATTAAA	-37	NA	67736559	67735593	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67735600_67736600
H1_mix_00017278	chr11	-	2652	3	NNC	ENSG00000255147.1	novel	374	3	NA	NA	-5624	-7007	intron_retention	FALSE	canonical	2	6	junction_1	1	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CGTCTCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	67762592	67756049	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_67756962_67758556_67759550_67761845
H1_mix_00017280	chr11	-	781	1	FSM	ENSG00000243672.1	ENST00000480160.1	781	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTCAGGCTTAAAACAGTA	NA	False	NA	NA	False	NA	NA	NA	67926431	67925650	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_67925600_67926400
H1_mix_00017281	chr11	-	388	2	NNC	ENSG00000254610.3	novel	776	4	NA	NA	-3	5906	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGAGTTCGAGACCAGCC	NA	False	NA	NA	False	NA	NA	NA	67955805	67949575	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_67949640_67955481
H1_mix_00017282	chr11	-	5569	10	NIC	ENSG00000110066.15	novel	5718	11	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_4	154.467544235746	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCGGTGTTCACTGTA	-10	True	NA	NA	False	AATAAA	-18	NA	68213314	68154862	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_68159172_68166981_68167179_68171014_68171152_68171231_68171252_68173803_68173914_68175017_68175184_68180131_68180201_68185780_68185929_68189916_68190153_68213137
H1_mix_00017283	chr11	-	2999	11	NNC	ENSG00000110066.15	novel	1599	11	NA	NA	0	2	intron_retention	FALSE	canonical	3	14	junction_7	145.749922813016	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGAGTCTGGTTCCTT	40	True	NA	2	True	AATAAA	-21	NA	68213595	68165712	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_68167179_68171014_68171152_68171231_68171252_68171542_68171710_68173803_68173914_68175017_68175184_68179469_68179831_68180131_68180201_68185780_68185929_68189916_68190153_68213476
H1_mix_00017284	chr11	-	1627	11	NIC	ENSG00000110066.15	novel	1599	11	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	125.724659474584	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTCTGAGTCTGGTT	22	True	NA	-2	True	AATAAA	-17	NA	68213282	68165716	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_68165949_68166981_68167179_68171014_68171152_68171231_68171252_68171542_68171710_68173803_68173914_68175017_68175184_68180131_68180201_68185780_68185929_68189916_68190153_68213137
H1_mix_00017286	chr11	-	1916	5	NNC	ENSG00000171067.11	novel	2071	4	NA	NA	0	16773	intron_retention	FALSE	non_canonical	0	0	junction_1	120.327417906311	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCTGAGCAAGTTGGTGC	26	True	NA	NA	False	NA	NA	NA	68271916	68244564	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_68244592_68261462_68262919_68263691_68263867_68268053_68268252_68271856
H1_mix_00017287	chr11	-	2072	5	NNC	ENSG00000171067.11	novel	2071	4	NA	NA	0	16773	intron_retention	FALSE	non_canonical	0	0	junction_1	120.327417906311	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCTGAGCAAGTTGGTGC	-5	True	NA	NA	False	NA	NA	NA	68271947	68244564	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_68244592_68261337_68262919_68263691_68263867_68268053_68268252_68271856
H1_mix_00017288	chr11	-	2253	4	NIC	ENSG00000171067.11	novel	2071	4	NA	NA	3	0	intron_retention	FALSE	canonical	3	43	junction_3	109.307923876644	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATCGTGTGGGTGCATCCT	-2	True	NA	-24	True	ATTAAA	-18	NA	68271944	68261337	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_68262919_68263691_68263867_68268053_68268252_68271645
H1_mix_00017291	chr11	-	2486	9	ISM	ENSG00000132749.11	ENST00000255087.10	2535	10	769	0	-140	0	3prime_fragment	FALSE	canonical	3	12	junction_6	49.1547301894741	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGTCATTAACTTAGTA	6744	False	NA	-24	True	AATAAA	-19	NA	68750751	68707439	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_68708501_68710873_68711050_68713269_68713408_68715836_68715940_68738699_68738789_68742317_68742395_68744990_68745112_68747207_68747367_68750189
H1_mix_00017292	chr11	-	8257	4	NIC	ENSG00000132749.11	novel	1235	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	17	junction_1	67.0190685965984	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTCTCTGGAAATTTTTT	26	True	NA	-5	True	AATAAA	-16	NA	68751460	68736131	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_68738789_68742317_68747367_68750189_68750700_68751419
H1_mix_00017293	chr11	-	6221	5	NIC	ENSG00000132749.11	novel	2535	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	17	junction_1	62.9578231834615	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTCTCTGGAAATTTTTT	-34	True	NA	-5	True	AATAAA	-16	NA	68751520	68736131	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_68738789_68742317_68745112_68747207_68747367_68750189_68750700_68751419
H1_mix_00017295	chr11	-	5224	19	FSM	ENSG00000110090.13	ENST00000265641.10	5238	19	16	-2	16	2	multi-exon	FALSE	canonical	1	1	junction_8	3.0731814857643	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTCTGTCTCTTTTGT	-2	True	NA	2	True	AATAAA	-26	NA	68841900	68754880	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_68757731_68759568_68759662_68760224_68760339_68761534_68761688_68762626_68762762_68773264_68773430_68775315_68775433_68780639_68780746_68781770_68781960_68784814_68785011_68793314_68793403_68794803_68794912_68796855_68796934_68799217_68799356_68803999_68804102_68807466_68807639_68812436_68812577_68815333_68815488_68841774
H1_mix_00017296	chr11	-	834	7	NNC	ENSG00000197345.13	novel	693	7	NA	NA	275	0	at_least_one_novel_splicesite	FALSE	canonical	2	48	junction_6	496.950617935693	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCAGGTTTCTGTGTTCT	316	False	NA	-10	True	AATAAA	-17	NA	68903503	68891278	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_68891396_68892889_68892994_68893402_68893456_68896514_68896679_68897926_68898013_68900547_68900606_68903251
H1_mix_00017297	chr11	-	5586	1	FSM	ENSG00000261625.1	ENST00000562276.1	1284	1	-4267	-35	-4267	35	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGTTTCTATCCCTGCG	7048	False	NA	37	True	NA	NA	NA	69006315	69000729	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_69000700_69006300
H1_mix_00017298	chr11	-	351	2	NNC	ENSG00000246889.3	novel	554	2	NA	NA	60	-14311	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	57	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCCACAGGAATTACACAT	9225	False	NA	NA	False	NA	NA	NA	70398302	70395401	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_70395548_70398097
H1_mix_00017299	chr11	-	9173	23	NNC	ENSG00000162105.21	novel	10830	26	NA	NA	1034	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_22	9.45148551881643	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGGTTGTGGTTCTGATT	1391	False	NA	-5	True	AATAAA	-13	NA	71251543	70469436	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_70473440_70485313_70487721_70490275_70490388_70492334_70492466_70502205_70502287_70502795_70502932_70659827_70659953_70661595_70661679_70698687_70698764_70798442_70798557_70807001_70807172_70820363_70820683_70896500_70896568_71056480_71056559_71075158_71075276_71092421_71092590_71094536_71094689_71109940_71110050_71113292_71113365_71118828_71119033_71147119_71147339_71224696_71224797_71251413
H1_mix_00017304	chr11	-	3557	13	FSM	ENSG00000137497.19	ENST00000541584.5	3557	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	149.584493960214	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGAGTTGACTTGATCG	2120	False	NA	-6	True	AATAAA	-20	NA	72014036	72002863	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_72003539_72003886_72004100_72004224_72004342_72004639_72004817_72005232_72005370_72006034_72006264_72007188_72007436_72008091_72008146_72008687_72008846_72008966_72009186_72009267_72009388_72010785_72010855_72012894
H1_mix_00017305	chr11	-	3921	25	FSM	ENSG00000137497.19	ENST00000613205.4	3940	25	20	-1	20	0	multi-exon	FALSE	canonical	0	0	junction_11	105.06413385272	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGAGTTGACTTGATCG	22	False	NA	-6	True	AATAAA	-20	NA	72080673	72002863	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_72003539_72003886_72004100_72004224_72004342_72004639_72004817_72005232_72005370_72006034_72006264_72007188_72007436_72008687_72008846_72008966_72009186_72009267_72009388_72010785_72010855_72016407_72016531_72017686_72017828_72018182_72018301_72018395_72018514_72018822_72018981_72019493_72019618_72021203_72021292_72022338_72022420_72023064_72023148_72024273_72024354_72029204_72029291_72035901_72035976_72069841_72069912_72080457
H1_mix_00017307	chr11	-	2682	15	ISM	ENSG00000137497.19	ENST00000393695.8	7198	27	23	12121	-4	-37	5prime_fragment	FALSE	canonical	3	134	junction_14	41.298564485602	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAATGTGAGAAGGCCCGC	-4	True	NA	NA	False	NA	NA	NA	72080519	72014984	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_72016261_72016407_72016531_72017686_72017828_72018182_72018301_72018395_72018514_72018822_72018981_72019493_72019618_72021203_72021292_72022338_72022420_72023064_72023148_72024273_72024354_72029204_72029291_72035901_72035976_72069841_72069912_72080457
H1_mix_00017311	chr11	-	2071	15	FSM	ENSG00000162129.14	ENST00000340729.9	2071	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	19.5720802811202	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTTACCTTCCCCTC	-11	True	NA	-18	True	AATAAA	-23	NA	72434534	72293302	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_72293616_72294021_72294127_72294324_72294445_72294619_72294694_72295491_72295649_72301802_72301965_72302303_72302349_72307198_72307255_72308526_72308605_72317105_72317221_72329706_72329805_72358879_72359009_72380280_72380385_72430311_72430364_72434071
H1_mix_00017312	chr11	-	612	3	FSM	ENSG00000162129.14	ENST00000542555.2	612	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	41.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGTATGTGTGATTCAGA	298	False	NA	2	True	ATTAAA	-38	NA	72434330	72428805	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_72429107_72430311_72430364_72434071
H1_mix_00017314	chr11	-	5026	33	NNC	ENSG00000186635.15	novel	5156	35	NA	NA	13	3	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_6	64.1403490402103	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGGCCTGTGATTGGC	11	True	NA	0	True	TATAAA	-26	NA	72752395	72685065	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_72685682_72686041_72686192_72687438_72687503_72687687_72687739_72688454_72688538_72693324_72693467_72693691_72693806_72694979_72695098_72695386_72695456_72695541_72695629_72695717_72695866_72696548_72696655_72696982_72697196_72697322_72697487_72697597_72697650_72697910_72698107_72699004_72699108_72699416_72699553_72701648_72701784_72702904_72703080_72704151_72704335_72705804_72705891_72707174_72707375_72709869_72709977_72710384_72710588_72711020_72711142_72711429_72711500_72712195_72712340_72712437_72712569_72713175_72713244_72714151_72714322_72726619_72727173_72752327
H1_mix_00017317	chr11	-	7214	9	FSM	ENSG00000054965.11	ENST00000064778.8	7296	9	0	82	0	-82	multi-exon	FALSE	canonical	0	0	junction_5	7.17635004720366	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATGTGGGAGCACAGTG	8	True	NA	-82	True	NA	NA	NA	73598189	73400568	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_73406745_73407512_73407644_73409486_73409662_73411393_73411537_73419873_73420000_73425021_73425049_73430689_73430771_73468404_73468493_73597922
H1_mix_00017319	chr11	-	7811	33	FSM	ENSG00000168014.18	ENST00000681924.1	7808	33	0	-3	0	0	multi-exon	FALSE	canonical	1	1	junction_12	14.8951740821482	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTGTTTGTAATCTGTG	418	False	NA	-21	True	AATAAA	-6	NA	74170792	74012731	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_74013526_74028286_74028399_74033350_74034279_74037477_74037699_74042053_74042219_74048204_74048339_74049336_74049543_74054606_74054672_74057405_74057545_74074252_74074601_74078114_74078718_74084880_74084971_74085521_74085887_74090812_74090937_74092415_74092589_74093815_74094000_74095227_74095409_74098008_74098256_74100524_74100677_74103130_74103626_74106370_74106494_74109033_74109153_74113779_74113893_74114383_74114594_74118227_74118383_74122987_74123136_74132843_74132973_74133424_74133558_74138719_74138968_74139604_74139829_74161398_74161557_74168343_74168614_74170737
H1_mix_00017332	chr11	-	3132	16	NIC	ENSG00000149269.10	novel	2543	16	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_2	218.695485905758	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGAGTATGCCTTTCTT	1	True	NA	-6	True	AATAAA	-18	NA	77411940	77322016	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_77323361_77325327_77325377_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77411773
H1_mix_00017338	chr11	-	2266	12	FSM	ENSG00000159063.14	ENST00000681384.1	2266	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	264.331341030986	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	0	True	NA	-16	True	AATAAA	-14	NA	78139611	78100945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78138709
H1_mix_00017339	chr11	-	2443	13	FSM	ENSG00000159063.14	ENST00000681575.1	2443	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	196.481692672767	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	NA	False	NA	-16	True	AATAAA	-14	NA	78139644	78100945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78138705
H1_mix_00017340	chr11	-	1320	11	FSM	ENSG00000159063.14	ENST00000532306.6	1320	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	216.101457653575	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGGAACTGCTTAGATA	23	True	NA	-34	True	AAGAAA	-7	NA	78139588	78100963	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
H1_mix_00017347	chr11	-	1420	8	FSM	ENSG00000137509.12	ENST00000531283.2	1420	8	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_1	17.2626765016321	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATGTTTTCCTATGCCT	-2	True	NA	NA	False	AATATA	-27	NA	82900430	82838268	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_82838575_82839260_82839426_82849048_82849219_82849913_82850072_82850323_82850506_82853176_82853279_82859976_82860118_82900234
H1_mix_00017348	chr11	-	435	4	FSM	ENSG00000247137.9	ENST00000529031.5	435	4	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	4.24264068711928	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAATGGTAAAGGTTTTA	1004	False	NA	-33	True	AATATA	-20	NA	83193600	83191062	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_83191169_83192427_83192542_83192735_83192817_83193466
H1_mix_00017350	chr11	-	1126	8	NIC	ENSG00000137500.10	novel	1919	9	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	268	junction_6	329.132626329092	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATACTGTGTCTTTATTGT	421	False	NA	-21	True	ACTAAA	-26	NA	83285964	83261757	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83280140_83280261_83285552
H1_mix_00017362	chr11	-	594	8	NNC	ENSG00000166012.17	novel	547	10	NA	NA	-97	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	144.15156422803	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCAGCATGTATTTTTGG	6732	False	NA	-28	True	ATTAAA	-23	NA	93734758	93730272	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_93730448_93730676_93730713_93731145_93731217_93731752_93731800_93732243_93732292_93733086_93733122_93733349_93733398_93734624
H1_mix_00017363	chr11	-	1561	14	NNC	ENSG00000166012.17	novel	1735	14	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	128.755858142133	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCAGCATGTATTTTTGG	10	True	NA	-28	True	ATTAAA	-23	NA	93741480	93730272	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_93730448_93730676_93730713_93731145_93731217_93731752_93731800_93732243_93732292_93733086_93733122_93733349_93733420_93734624_93734661_93736140_93736305_93736693_93736752_93737063_93737240_93738108_93738500_93739236_93739332_93741321
H1_mix_00017367	chr11	-	2611	13	NIC	ENSG00000166012.17	novel	1735	14	NA	NA	0	-69	intron_retention	FALSE	canonical	0	0	junction_2	120.706341313675	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCAGCTCTTTAGAGGAT	11	True	NA	NA	False	GATAAA	-8	NA	93741479	93730422	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_93730448_93730676_93730713_93731149_93731217_93731752_93731800_93732243_93732292_93733086_93733122_93733349_93734661_93736140_93736305_93736693_93736752_93737063_93737240_93738108_93738500_93739236_93739332_93741321
H1_mix_00017376	chr11	-	4707	17	FSM	ENSG00000087053.20	ENST00000674974.1	4705	17	0	-2	0	0	multi-exon	FALSE	canonical	2	10	junction_14	199.534105793972	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATGGATGACACATTCC	348	False	NA	-4	True	AATAAA	-18	NA	95924123	95832879	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95882373_95882497_95887611_95887685_95888155_95888262_95923874
H1_mix_00017377	chr11	-	2825	12	FSM	ENSG00000087053.20	ENST00000675438.1	2824	12	0	-1	0	0	multi-exon	FALSE	canonical	2	4	junction_3	158.790781837908	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTGTCCAAAGTTGCCA	NA	False	NA	-1	True	ATTAAA	-28	NA	95865646	95834087	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600
H1_mix_00017397	chr11	-	4779	25	NIC	ENSG00000048028.11	novel	4669	25	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	2	6	junction_24	121.856102523518	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGGTGTGCAGTATGGT	25	True	NA	-12	True	AATAAA	-14	NA	113875493	113797874	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_113799416_113801482_113801679_113803157_113803282_113803797_113803878_113804672_113804752_113804867_113805047_113808297_113808438_113809062_113809255_113812275_113812505_113813884_113813956_113815173_113815383_113817657_113817838_113823604_113823701_113827232_113827361_113829196_113829346_113830866_113830944_113831919_113831994_113833419_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113852500_113852634_113854257_113854336_113874516_113874801_113875444
H1_mix_00017398	chr11	-	4642	25	NNC	ENSG00000048028.11	novel	4669	25	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_23	119.10201480477	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGGTGTGCAGTATGGT	-5	True	NA	-12	True	AATAAA	-14	NA	113875523	113797874	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_113799416_113801482_113801679_113803157_113803282_113803797_113803878_113804672_113804752_113804867_113805047_113808297_113808438_113809062_113809255_113812275_113812505_113813884_113813956_113815173_113815383_113817657_113817838_113823604_113823701_113827232_113827361_113829196_113829346_113830866_113830944_113831919_113831994_113833419_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113852500_113852634_113854257_113854336_113874762_113874880_113875444
H1_mix_00017399	chr11	-	4541	24	NIC	ENSG00000048028.11	novel	4669	25	NA	NA	0	-1	combination_of_known_junctions	TRUE	canonical	3	10	junction_15	148.590377175091	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGGTGTGCAGTATGGT	-18	True	NA	-12	True	AATAAA	-14	NA	113875536	113797874	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_113799416_113801482_113801679_113803157_113803282_113803797_113803878_113804672_113804752_113804867_113805047_113808297_113808438_113809062_113809255_113812275_113812505_113813884_113813956_113815173_113815383_113817657_113817838_113823604_113823701_113827232_113827361_113828843_113828921_113829196_113829346_113830866_113830944_113833419_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113852500_113852634_113854257_113854336_113875444
H1_mix_00017410	chr11	-	1824	8	FSM	ENSG00000172269.20	ENST00000683567.1	1811	8	0	-13	0	0	multi-exon	FALSE	canonical	3	21	junction_4	147.268185183857	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATGTAGGTATATTT	623	False	NA	-10	True	AATAAA	-18	NA	119101526	119096509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119097064_119097141_119097298_119097463_119097552_119097854_119097926_119098402_119098488_119100261_119100409_119100629_119100844_119101017
H1_mix_00017411	chr11	-	2622	5	FSM	ENSG00000172269.20	ENST00000682665.1	2612	5	0	-10	0	0	multi-exon	FALSE	canonical	3	326	junction_4	61.5116858816274	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCTCAATGGAGACAATAAA	-1	True	NA	-47	True	NA	NA	NA	119101878	119096546	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr11_-_119098044_119098402_119098488_119100261_119100409_119100629_119101139_119101494
H1_mix_00017437	chr11	-	4977	26	NIC	ENSG00000170322.15	novel	5173	27	NA	NA	-7	-138	combination_of_known_junctions	FALSE	canonical	3	37	junction_25	37.7412241454884	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAATTTGTGTTTGTATTA	0	True	NA	-3	True	AATAAA	-23	NA	129895564	129863773	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr11_-_129864851_129864965_129865102_129865876_129865984_129869493_129870262_129872883_129873097_129873744_129874016_129874112_129874334_129874500_129874581_129874792_129874917_129875356_129875464_129876720_129876896_129877324_129877386_129878308_129878356_129878463_129878544_129881442_129881509_129881726_129881854_129882085_129882195_129882450_129882632_129883121_129883207_129884069_129884144_129884744_129884883_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129895495
H1_mix_00017438	chr11	-	4934	30	NNC	ENSG00000170322.15	novel	5173	27	NA	NA	8	-142	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_22	55.0162877190713	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGACCAATTTGTGTTTGT	15	True	NA	-7	True	AATAAA	-19	NA	129895549	129863777	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr11_-_129864851_129864965_129865102_129865876_129865984_129869493_129869913_129870179_129870262_129872883_129873097_129873744_129874016_129874112_129874334_129874500_129874581_129874792_129874917_129875356_129875464_129876720_129876896_129877324_129877386_129878308_129878356_129878463_129878544_129881442_129881509_129881726_129881854_129882085_129882195_129882450_129882632_129883121_129883207_129884069_129884144_129884744_129884847_129884985_129885096_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129893296_129893386_129894358_129894439_129895495
H1_mix_00017446	chr11	-	1087	6	ISM	ENSG00000151500.15	ENST00000352327.5	835	7	41	17	-8	-17	intron_retention	FALSE	canonical	3	417	junction_1	573.561644463784	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCAATAAAATATCAAAGTT	32	True	NA	4	True	NA	NA	NA	134253309	134248304	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr11_-_134248485_134249166_134249263_134249827_134249921_134250274_134250344_134251129_134251309_134252839
H1_mix_00017448	chr11	+	592	1	Intergenic	novelGene_215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGTTTGTTTTGTGTATT	52	False	NA	25	True	AATAAA	-37	NA	695859	696451	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_695900_696500
H1_mix_00017449	chr11	+	605	1	Intergenic	novelGene_216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGGGCGGTAGGCTGGGTG	NA	False	NA	NA	False	NA	NA	NA	880872	881477	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_880900_881500
H1_mix_00017450	chr11	+	1321	1	Intergenic	novelGene_217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTAGAAGTCTCTATAATC	NA	False	NA	22	True	AATAAA	-18	NA	3410491	3411812	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_3410500_3411800
H1_mix_00017451	chr11	+	357	1	Intergenic	novelGene_233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGCCATCAATAAATCAAGC	NA	False	NA	NA	False	NA	NA	NA	23185323	23185680	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_23185300_23185700
H1_mix_00017452	chr11	+	1978	1	Intergenic	novelGene_240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAAGGCCCTAAATGTAAA	4505	False	NA	9	True	ATTAAA	-16	NA	43865205	43867183	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_43865200_43867200
H1_mix_00017453	chr11	+	230	1	Intergenic	novelGene_241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGGCTAAATTGGAAGAAG	1208	False	NA	NA	False	AATAAA	-36	NA	56691456	56691686	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_56691500_56691700
H1_mix_00017455	chr11	+	1632	1	Intergenic	novelGene_248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGGCGTGAGCCACTGC	926	False	NA	NA	False	NA	NA	NA	66659294	66660926	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_66659300_66660900
H1_mix_00017456	chr11	+	5319	1	Intergenic	novelGene_250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAAGCCTGTTTGGTGGTC	NA	False	NA	5	True	ATTAAA	-16	NA	68634079	68639398	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_+_68634100_68639400
H1_mix_00017465	chr11_KI270721v1_random	+	998	6	Intergenic	novelGene_262	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_5	613.713744346662	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGAAGCTCTGCTTCCTT	NA	False	NA	NA	False	AATAAA	-22	NA	2492	11797	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_KI270721v1_random_+_2693_6093_6217_7321_7405_7976_8051_10805_10977_11450
H1_mix_00017467	chr11_KI270721v1_random	+	717	5	Intergenic	novelGene_263	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	729	junction_4	250.525946760011	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGCTTCCTTCTTCTC	NA	False	NA	NA	False	AATAAA	-28	NA	2608	11803	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_KI270721v1_random_+_2693_6093_6217_7321_7405_7976_8051_11450
H1_mix_00017468	chr11_KI270721v1_random	-	1493	5	Intergenic	novelGene_264	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	2.59807621135332	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTCGAGGACTCTGGA	NA	False	NA	NA	False	AATAAA	-15	NA	56902	50357	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr11_KI270721v1_random_-_50977_51057_51181_51260_51374_51468_51604_56399
H1_mix_00017469	chr12	+	2307	13	FSM	ENSG00000120647.10	ENST00000239830.9	2300	13	-7	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	32.9882133833013	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTCTTTGAGTTTTCTG	-13	True	NA	15	True	AATAAA	-16	NA	401636	442642	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_401685_405510_405565_409367_409422_411746_411979_418493_418637_428768_428866_430663_430737_431865_431955_433173_433323_438334_438555_440616_440743_440843_440997_441773
H1_mix_00017470	chr12	+	2350	12	FSM	ENSG00000120647.10	ENST00000412006.6	2253	12	-97	0	-97	0	multi-exon	FALSE	canonical	3	69	junction_2	26.9084766514658	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTCTTTGAGTTTTCTG	3636	False	NA	15	True	AATAAA	-16	NA	401539	442642	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_401685_405510_405565_411746_411979_418493_418637_428768_428866_430663_430737_431865_431955_433173_433323_438334_438555_440616_440743_440843_440997_441773
H1_mix_00017471	chr12	+	5471	20	NIC	ENSG00000139044.12	novel	5493	20	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	66	junction_14	17.0620506800092	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAAGGTGCTTGT	-5	True	NA	NA	False	ATTAAA	-17	NA	459952	563498	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_460546_535165_535270_536217_536296_544338_544435_544881_544973_545368_545470_546645_546714_548023_548103_548230_548298_549768_549913_550921_551032_552062_552164_552466_552529_553190_553984_556546_556867_557607_557762_558015_558089_558507_558662_559294_559422_561342
H1_mix_00017472	chr12	+	5505	20	FSM	ENSG00000139044.12	ENST00000266383.10	5493	20	-13	1	-13	-1	multi-exon	FALSE	canonical	3	20	junction_13	24.0764019362094	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTGCTTGTCTTTTCCTGT	-32	True	NA	NA	False	ATTAAA	-27	NA	459925	563508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_460546_535165_535270_536217_536296_544338_544435_544881_544973_545368_545470_546645_546714_548023_548103_548230_548298_549768_549913_550921_551032_552062_552164_552466_552529_553193_553984_556546_556867_557607_557762_558015_558089_558507_558662_559294_559422_561342
H1_mix_00017473	chr12	+	1885	7	FSM	ENSG00000139044.12	ENST00000535680.5	729	7	-544	-612	-13	612	multi-exon	FALSE	canonical	3	89	junction_1	12.4498995979887	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGTGTGCACCCCATAAAT	-32	True	NA	NA	False	NA	NA	NA	459925	547440	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_460546_535165_535270_536217_536296_544338_544435_544881_544973_545368_545470_546645
H1_mix_00017474	chr12	+	4590	8	FSM	ENSG00000139044.12	ENST00000535402.1	4590	8	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	17.7821281525202	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAAGGTGCTTGT	1207	False	NA	NA	False	ATTAAA	-17	NA	552074	563498	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_552164_552466_553984_556546_556867_557607_557762_558015_558089_558507_558662_559294_559422_561342
H1_mix_00017475	chr12	+	2194	2	FSM	ENSG00000177406.5	ENST00000318291.4	2194	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTATGTGCCTTTGTTC	97	False	NA	12	True	AATAAA	-13	NA	642980	645415	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_643718_643958
H1_mix_00017476	chr12	+	2478	2	FSM	ENSG00000177406.5	ENST00000670735.1	2526	2	-399	447	143	0	multi-exon	FALSE	canonical	2	3	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTATGTGCCTTTGTTC	NA	False	NA	12	True	AATAAA	-13	NA	642816	645415	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_643838_643958
H1_mix_00017478	chr12	+	10809	28	FSM	ENSG00000060237.19	ENST00000315939.11	10796	28	-13	0	-13	0	multi-exon	FALSE	canonical	3	10	junction_10	23.2956191387188	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGGGTTTCATTTCCA	-12	True	NA	23	True	AATAAA	-20	NA	752565	911452	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_754325_813641_813815_827041_827263_830002_830161_857160_857250_859244_859465_861012_861344_862082_862271_871264_871349_878211_878362_879572_880032_880720_881000_881691_881790_881910_882074_882942_883060_883394_883569_883773_883832_884120_884244_884648_886085_887220_887305_889139_889224_890452_890514_894561_894636_896070_896733_897478_897682_900475_900671_907846_908035_908474
H1_mix_00017479	chr12	+	11482	27	NIC	ENSG00000060237.19	novel	10796	28	NA	NA	0	0	intron_retention	TRUE	canonical	2	4	junction_9	23.504531855612	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGGGTTTCATTTCCA	1	True	NA	23	True	AATAAA	-20	NA	752578	911452	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_754325_813641_813815_827041_827263_830002_830161_857160_857250_859244_859465_861012_861344_862082_862271_871264_871349_878214_878362_879572_881000_881691_881790_881910_882074_882942_883060_883394_883569_883773_883832_884120_884244_884648_886085_887220_887305_889139_889224_890452_890514_894561_894636_896070_896733_897478_897682_900475_900671_907846_908035_908474
H1_mix_00017480	chr12	+	10299	26	NIC	ENSG00000060237.19	novel	10796	28	NA	NA	25	548	combination_of_known_junctions	FALSE	canonical	3	10	junction_8	22.6097324177001	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACAGAGCCAGACCCCCC	192	False	NA	NA	False	NA	NA	NA	753080	912000	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_754325_813641_813815_827041_827263_830002_830161_857160_857250_859244_859465_861012_861344_862082_862271_878211_878362_880720_881000_881691_881790_881910_882074_882942_883060_883394_883569_883773_883832_884120_884244_884648_886085_887220_887305_889139_889224_890452_890514_894561_894636_896070_896733_897478_897682_900475_900671_907846_908035_908474
H1_mix_00017481	chr12	+	9575	26	NIC	ENSG00000060237.19	novel	10796	28	NA	NA	198	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_8	22.6702977483755	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGGGTTTCATTTCCA	39	False	NA	23	True	AATAAA	-20	NA	753253	911452	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_754325_813641_813815_827041_827263_830002_830161_857160_857250_859244_859465_861012_861344_862082_862271_878214_878362_880720_881000_881691_881790_881910_882074_882942_883060_883394_883569_883773_883832_884120_884244_884648_886085_887220_887305_889139_889224_890452_890514_894561_894636_896070_896733_897478_897682_900475_900671_907846_908035_908474
H1_mix_00017483	chr12	+	9461	19	FSM	ENSG00000082805.21	ENST00000397203.7	7033	19	-20	-2408	-1	-7	multi-exon	FALSE	canonical	3	48	junction_1	23.9147792518908	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCGTGCTGTGTCCTT	-1	True	NA	8	True	TATAAA	-8	NA	991227	1495924	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_991488_1027747_1028573_1083163_1083581_1104749_1104825_1110191_1110348_1112214_1112299_1115865_1116034_1141619_1141788_1180539_1180678_1181924_1182066_1183280_1183422_1189858_1190053_1236768_1236905_1263033_1263166_1289851_1290013_1371832_1371978_1408148_1408248_1444561_1444751_1490092
H1_mix_00017484	chr12	+	9303	19	FSM	ENSG00000082805.21	ENST00000360905.9	9308	19	5	0	-1	0	multi-exon	FALSE	canonical	3	43	junction_1	24.5814343271553	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGTGTCCTTCTTTGAG	-1	True	NA	15	True	TATAAA	-15	NA	991227	1495931	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_991323_1027747_1028573_1083163_1083581_1104749_1104825_1110191_1110348_1112214_1112299_1115865_1116034_1141619_1141788_1180539_1180678_1181924_1182066_1183280_1183422_1189858_1190053_1236768_1236905_1263033_1263166_1289851_1290013_1371832_1371978_1408148_1408248_1444561_1444751_1490092
H1_mix_00017485	chr12	+	9223	18	FSM	ENSG00000082805.21	ENST00000543086.7	9241	18	15	3	0	-1	multi-exon	FALSE	canonical	3	33	junction_5	27.5221207036755	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCTGTGTCCTTCTTTGA	-6	True	NA	14	True	TATAAA	-14	NA	991222	1495930	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_991323_1027747_1028573_1083163_1083581_1104749_1104825_1110191_1110348_1115865_1116034_1141619_1141788_1180539_1180678_1181924_1182066_1183280_1183422_1189858_1190053_1236768_1236905_1263033_1263166_1289851_1290013_1371832_1371978_1408148_1408248_1444561_1444751_1490092
H1_mix_00017487	chr12	+	764	4	FSM	ENSG00000111186.13	ENST00000543071.5	1304	4	540	0	37	0	multi-exon	FALSE	canonical	2	2	junction_2	1.69967317119759	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCGCGTCACCCGCAAGG	616	False	NA	NA	False	NA	NA	NA	1631351	1645933	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_1631435_1632657_1632906_1639683_1639977_1645793
H1_mix_00017488	chr12	+	4040	8	NIC	ENSG00000006831.10	novel	3971	8	NA	NA	-47	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_1	14.2427926635594	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGACCTGTCGTGTGTTTT	-26	True	NA	NA	False	AATAAA	-16	NA	1691022	1788674	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_1691214_1754257_1754515_1772841_1772962_1777853_1778026_1780450_1780638_1780888_1781077_1783879_1784074_1785943
H1_mix_00017489	chr12	+	3971	8	FSM	ENSG00000006831.10	ENST00000357103.5	3971	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	19.0316599810067	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGACCTGTCGTGTGTTTT	21	True	NA	NA	False	AATAAA	-16	NA	1691069	1788674	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_1691192_1754257_1754515_1772841_1772962_1777853_1778026_1780450_1780638_1780888_1781077_1783879_1784074_1785943
H1_mix_00017490	chr12	+	719	2	FSM	ENSG00000006831.10	ENST00000544470.1	793	2	0	74	0	-74	multi-exon	FALSE	canonical	3	73	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTCACATATGCAAAAGTG	NA	False	NA	NA	False	NA	NA	NA	1772922	1778533	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_1772962_1777853
H1_mix_00017491	chr12	+	3715	10	FSM	ENSG00000004478.8	ENST00000001008.6	3715	10	0	0	0	0	multi-exon	FALSE	canonical	3	1212	junction_3	53.5864364633394	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTACAAGTCTTTCAGCC	-30	True	NA	16	True	ATTAAA	-29	NA	2794969	2805423	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_2795245_2797137_2797283_2797728_2797872_2798705_2798827_2799087_2799245_2799849_2799941_2800038_2800123_2800391_2800578_2801116_2801357_2803150
H1_mix_00017492	chr12	+	1646	4	FSM	ENSG00000111203.13	ENST00000541659.1	587	4	-106	-953	-13	751	multi-exon	FALSE	canonical	3	113	junction_3	2.49443825784929	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCGAAATCGCGCCACTG	-18	True	NA	NA	False	NA	NA	NA	2812654	2819411	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_2812857_2817222_2817319_2817908_2817951_2818105
H1_mix_00017493	chr12	+	2333	12	FSM	ENSG00000111203.13	ENST00000228799.7	2320	12	-13	0	-13	0	multi-exon	FALSE	canonical	3	86	junction_11	14.9743582486422	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCTCTCAGTGTAGGTA	-18	True	NA	18	True	AATAAA	-24	NA	2812654	2825076	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_2812857_2817222_2817319_2817908_2817951_2818105_2818278_2820085_2820226_2820723_2820873_2821261_2821360_2821542_2821597_2821691_2821793_2822793_2822912_2823769_2823944_2824089
H1_mix_00017494	chr12	+	559	2	FSM	ENSG00000111203.13	ENST00000540662.1	559	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACCCACTCCCCACTGT	NA	False	NA	NA	False	NA	NA	NA	2823841	2824476	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_2824014_2824089
H1_mix_00017496	chr12	+	576	3	FSM	ENSG00000171792.11	ENST00000538636.5	583	3	7	0	-2	0	multi-exon	FALSE	canonical	2	4	junction_1	199.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCCCCAAAGCTGTGGGA	-19	True	NA	NA	False	NA	NA	NA	2877205	2888137	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_2877283_2885262_2885535_2887910
H1_mix_00017497	chr12	+	1430	3	FSM	ENSG00000171792.11	ENST00000489288.7	1926	3	-20	516	4	0	multi-exon	FALSE	canonical	3	365	junction_1	19	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACTAATGGTCTTTGTTT	-22	True	NA	8	True	AATACA	-15	NA	2877202	2889008	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_2877283_2885282_2885535_2887910
H1_mix_00017498	chr12	+	1610	2	FSM	ENSG00000171792.11	ENST00000464682.2	1605	2	-5	0	4	0	multi-exon	FALSE	canonical	3	58	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGACTTCCCCAGTCAA	-22	True	NA	-5	True	NA	NA	NA	2877202	2889440	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_2877283_2887910
H1_mix_00017499	chr12	+	1651	3	FSM	ENSG00000171792.11	ENST00000461997.5	1655	3	4	0	4	0	multi-exon	FALSE	canonical	3	40	junction_2	162.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGGACATAGATGAGTTCT	-22	True	NA	-17	True	NA	NA	NA	2877202	2889271	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_2877283_2885282_2885493_2887910
H1_mix_00017500	chr12	+	3100	11	FSM	ENSG00000078246.17	ENST00000448120.7	3080	11	-20	0	-16	0	multi-exon	FALSE	canonical	3	100	junction_6	23.8067217398784	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCACTGCCTTTGCAAG	NA	False	NA	12	True	AATAAA	-19	NA	2890870	2941138	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_2890989_2909528_2909581_2920762_2920923_2922261_2922403_2930247_2930346_2931036_2931241_2933417_2933531_2934446_2934562_2937630_2937730_2938113_2938286_2939310
H1_mix_00017501	chr12	+	1653	12	FSM	ENSG00000197905.10	ENST00000358409.7	1637	12	-16	0	-16	0	multi-exon	FALSE	canonical	3	25	junction_5	75.1634032630418	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCAGAGGACCTGGTCTG	-1	True	NA	12	True	AATAAA	-17	NA	2959313	3040665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_2959482_2959947_2960041_2994737_2994993_3011003_3011069_3012169_3012233_3018544_3018589_3019114_3019171_3020633_3020774_3021843_3022018_3037967_3038109_3040106_3040260_3040364
H1_mix_00017502	chr12	+	1666	12	NIC	ENSG00000197905.10	novel	1710	13	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	71.1938338865879	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCAGAGGACCTGGTCTG	-6	True	NA	12	True	AATAAA	-17	NA	2959336	3040665	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_2959482_2994737_2994993_3011003_3011069_3012169_3012233_3017397_3017527_3018544_3018589_3019114_3019171_3020633_3020774_3021843_3022018_3037967_3038109_3040106_3040260_3040364
H1_mix_00017503	chr12	+	1782	13	FSM	ENSG00000197905.10	ENST00000359864.8	1710	13	-83	11	-16	0	multi-exon	FALSE	canonical	3	204	junction_1	28.2999803690548	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCAGAGGACCTGGTCTG	-1	True	NA	12	True	AATAAA	-17	NA	2959313	3040665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_2959482_2959947_2960041_2994737_2994993_3011003_3011069_3012169_3012233_3017397_3017527_3018544_3018589_3019114_3019171_3020633_3020774_3021843_3022018_3037967_3038109_3040106_3040260_3040364
H1_mix_00017504	chr12	+	801	6	FSM	ENSG00000197905.10	ENST00000543035.6	801	6	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_1	7.23878442834154	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTATGGCCTCTGGTTT	-6	True	NA	NA	False	NA	NA	NA	2959795	3018588	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_2960041_2994737_2994993_3011003_3011069_3012169_3012233_3017397_3017527_3018544
H1_mix_00017506	chr12	+	4011	1	FSM	ENSG00000250899.3	ENST00000513358.3	3514	1	580	-1077	580	1077	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTGTGTGCGTGATCTT	NA	False	NA	9	True	AGTAAA	-20	NA	3042016	3046027	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_3042000_3046000
H1_mix_00017507	chr12	+	4328	9	FSM	ENSG00000011105.14	ENST00000011898.10	4322	9	-6	0	-4	0	multi-exon	FALSE	canonical	3	29	junction_1	5.67890834580027	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGCTGTCTCTCAGTG	-12	True	NA	21	True	AATAAA	-23	NA	3077372	3286559	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_3077454_3083652_3083720_3201176_3201257_3278420_3278613_3278991_3279067_3280381_3280484_3281197_3281330_3281733_3281818_3283044
H1_mix_00017508	chr12	+	4265	8	FSM	ENSG00000011105.14	ENST00000537971.5	4284	8	18	1	-4	-1	multi-exon	FALSE	canonical	1	6	junction_1	12.6700675706524	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGTCTCTCAGTGGTGT	-12	True	NA	25	True	AATAAA	-27	NA	3077372	3286563	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_3077454_3201176_3201257_3278420_3278613_3278991_3279067_3280381_3280484_3281197_3281330_3281733_3281818_3283044
H1_mix_00017510	chr12	+	1425	1	FSM	ENSG00000118976.5	ENST00000237841.5	3067	1	1626	16	1626	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCTTGACGGTTGTTGCCG	NA	False	NA	NA	False	NA	NA	NA	3841084	3842509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_3841100_3842500
H1_mix_00017511	chr12	+	2756	2	FSM	ENSG00000256969.2	ENST00000543206.1	542	2	-2259	45	-2259	0	multi-exon	FALSE	canonical	3	8	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGCCCGAAGTTAAAGCT	6828	False	NA	-26	True	NA	NA	NA	4018717	4026613	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_4021082_4026221
H1_mix_00017512	chr12	+	6849	6	FSM	ENSG00000118971.9	ENST00000676411.1	6849	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	333.830495910724	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTATCTGGCCGTTTTTG	9	False	NA	18	True	AATAAA	-14	NA	4269770	4305350	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_4270369_4274000_4274236_4276004_4276221_4278759_4278920_4288841_4288991_4299859
H1_mix_00017513	chr12	+	6689	5	FSM	ENSG00000118971.9	ENST00000261254.8	6493	5	-199	3	-199	0	multi-exon	FALSE	canonical	3	804	junction_3	26.3106442338457	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTATCTGGCCGTTTTTG	689	False	NA	18	True	AATAAA	-14	NA	4273562	4305350	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_4274236_4276004_4276221_4278759_4278920_4288841_4288991_4299859
H1_mix_00017514	chr12	+	8232	6	FSM	ENSG00000078237.7	ENST00000179259.6	8209	6	-23	0	-23	0	multi-exon	FALSE	canonical	3	174	junction_5	9.86711710683521	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCATCTTTTTATTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	4321189	4360028	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_4321304_4331279_4331318_4337038_4337161_4349818_4349897_4351266_4351378_4352259
H1_mix_00017515	chr12	+	2133	9	FSM	ENSG00000111247.15	ENST00000352618.9	2112	9	-21	0	0	0	multi-exon	FALSE	canonical	3	287	junction_7	58.3501017565522	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTTGTACACTTCTTT	-7	True	NA	31	True	ATTAAA	-16	NA	4538868	4560047	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_4538957_4541883_4541934_4543762_4543905_4546308_4546419_4548091_4548179_4548686_4548837_4552982_4553148_4556352_4556503_4558856
H1_mix_00017516	chr12	+	2184	10	FSM	ENSG00000111247.15	ENST00000228843.13	2163	10	-21	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	157.558768185394	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTTGTACACTTCTTT	-7	True	NA	31	True	ATTAAA	-16	NA	4538868	4560047	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_4538957_4541883_4541934_4543762_4543905_4545781_4545833_4546308_4546419_4548091_4548179_4548686_4548837_4552982_4553148_4556352_4556503_4558856
H1_mix_00017518	chr12	+	810	8	FSM	ENSG00000111247.15	ENST00000544927.5	787	8	-23	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	141.902380932406	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAAATGCCACTAGCACC	31	True	NA	NA	False	NA	NA	NA	4538906	4558970	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_4538957_4541883_4541934_4543762_4543905_4546308_4546419_4548091_4548179_4548686_4548837_4552982_4553090_4558856
H1_mix_00017519	chr12	+	1830	12	FSM	ENSG00000010219.14	ENST00000010132.6	1840	12	10	0	10	0	multi-exon	FALSE	canonical	0	0	junction_2	15.9275217913278	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCATGACTCCTCTTATG	10	False	NA	40	True	CATAAA	-35	NA	4590329	4613888	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_4590441_4591159_4591299_4593001_4593166_4596148_4596286_4596588_4596730_4599027_4599167_4599706_4599789_4604913_4605087_4607326_4607388_4610154_4610285_4612542_4612719_4613511
H1_mix_00017520	chr12	+	855	4	FSM	ENSG00000010219.14	ENST00000545571.5	855	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	14.8996644257513	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAACATGGCCAATTGGC	-32	True	NA	25	True	CATAAA	-20	NA	4604896	4613873	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_4605087_4610154_4610285_4612542_4612719_4613514
H1_mix_00017521	chr12	+	2458	4	ISM	ENSG00000010219.14	ENST00000010132.6	1840	12	15228	65	591	0	3prime_fragment	FALSE	canonical	3	17	junction_1	13.1233464566864	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCAGACTGTTTTTTTT	563	False	NA	-25	True	NA	NA	NA	4605547	4613823	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_4607388_4610154_4610285_4612542_4612719_4613511
H1_mix_00017524	chr12	+	1130	3	FSM	ENSG00000139180.11	ENST00000544679.1	782	3	-22	-326	2	-246	multi-exon	FALSE	canonical	3	891	junction_1	8.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCCTTTGTCGTCCTTTA	NA	False	NA	NA	False	NA	NA	NA	4649096	4655704	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_4649176_4654291_4654463_4654824
H1_mix_00017525	chr12	+	8117	11	FSM	ENSG00000139180.11	ENST00000266544.10	8356	11	-19	258	0	-258	multi-exon	FALSE	canonical	3	796	junction_5	46.3237520069348	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTCCTGGCTGTTTGA	NA	False	NA	NA	False	NA	NA	NA	4649094	4694059	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_4649176_4654291_4654463_4654824_4654923_4657747_4657840_4659035_4659178_4662532_4662636_4668456_4668525_4669740_4669818_4682204_4682301_4685258_4685326_4686937
H1_mix_00017526	chr12	+	3323	15	FSM	ENSG00000255639.3	ENST00000648836.1	3317	15	-6	0	-6	0	multi-exon	FALSE	canonical	2	6	junction_10	408.187538181325	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCTTATACATAAGGCAAA	NA	False	NA	NA	False	ATTAAA	-45	NA	4649094	4774184	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_4649176_4654291_4654463_4654824_4654923_4657747_4657840_4659035_4659178_4662532_4662636_4668456_4668525_4669740_4669818_4682204_4682301_4685258_4685326_4760957_4761144_4763252_4763391_4763951_4764048_4765378_4765547_4772444
H1_mix_00017528	chr12	+	577	4	FSM	ENSG00000130035.9	ENST00000542998.5	577	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	13.3666251038423	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTATGGGGTGGTCAGGGG	NA	False	NA	NA	False	NA	NA	NA	4763343	4851003	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_4763391_4763951_4764048_4765378_4765547_4850737
H1_mix_00017529	chr12	+	6649	2	Fusion	ENSG00000130035.9_ENSG00000151079.7	novel	1632	2	NA	NA	142	-3	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATCTGGTTAATACATACG	15	False	NA	NA	False	AATAAA	-14	NA	4809317	4851924	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr12_+_4814779_4850736
H1_mix_00017531	chr12	+	2874	1	FSM	ENSG00000130037.5	ENST00000252321.5	2910	1	-43	79	-43	-79	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATATTGGAGGAATACTTC	55	False	NA	NA	False	AAAAAG	-9	NA	5043835	5046709	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_5043800_5046700
H1_mix_00017532	chr12	+	1208	2	FSM	ENSG00000185652.12	ENST00000423158.4	1341	2	-7	140	-7	0	multi-exon	FALSE	canonical	2	7	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGGCCTCTCCCATCTG	11	False	NA	NA	False	AATAAA	-19	NA	5432100	5495159	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_5432343_5494193
H1_mix_00017533	chr12	+	1272	8	FSM	ENSG00000010278.15	ENST00000642746.1	1272	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	498.691839737135	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATGACAATGTCCTGGAC	4	True	NA	1	True	AATAAA	-3	NA	6199840	6238247	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6200073_6225425_6225535_6232631_6232730_6233411_6233487_6235228_6235328_6235475_6235566_6236191_6236276_6237762
H1_mix_00017534	chr12	+	1436	9	FSM	ENSG00000010278.15	ENST00000382518.6	1566	9	126	4	0	0	multi-exon	FALSE	canonical	2	8	junction_1	471.328640653207	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTTGTTTTGTTTAAT	4	True	NA	21	True	AATAAA	-23	NA	6199840	6238267	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6200073_6200421_6200566_6225425_6225535_6232631_6232730_6233411_6233487_6235228_6235328_6235475_6235566_6236191_6236276_6237762
H1_mix_00017535	chr12	+	612	5	FSM	ENSG00000010278.15	ENST00000677718.1	3334	5	0	2722	0	-933	multi-exon	FALSE	canonical	3	1222	junction_1	113.812070976676	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTCGCCTTGGCAAAGA	1	True	NA	NA	False	NA	NA	NA	6200334	6235327	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6200566_6225425_6225535_6232631_6232730_6233411_6233487_6235228
H1_mix_00017536	chr12	+	1204	9	FSM	ENSG00000010278.15	ENST00000382519.9	1182	9	-22	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	602.513433460201	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATATTGTACATAAAAGA	-18	True	NA	103	True	AATGAA	-28	NA	6200362	6238139	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6200566_6225425_6225535_6232631_6232730_6232936_6233006_6233411_6233487_6235228_6235328_6235475_6235566_6236191_6236276_6237762
H1_mix_00017537	chr12	+	1240	8	FSM	ENSG00000010278.15	ENST00000009180.10	1225	8	-15	0	0	0	multi-exon	FALSE	canonical	3	1222	junction_1	109.438082391602	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTTTTGTTTTGTTTAA	4	True	NA	20	True	AATAAA	-22	NA	6200384	6238266	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6200566_6225425_6225535_6232631_6232730_6233411_6233487_6235228_6235328_6235475_6235566_6236191_6236276_6237762
H1_mix_00017538	chr12	+	2975	16	FSM	ENSG00000008323.16	ENST00000684764.1	2969	16	-6	0	-6	0	multi-exon	TRUE	canonical	3	83	junction_10	14.2875236949351	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGGTGTGGTGGTGTGCC	-14	True	NA	13	True	AATATA	-40	NA	6310675	6328506	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6310849_6312158_6312365_6313628_6313785_6315004_6315170_6315553_6315650_6315868_6315920_6316254_6316405_6317302_6317414_6317546_6317697_6317856_6317995_6318300_6318421_6318744_6318878_6318992_6319109_6326427_6326574_6327253_6327947_6328135
H1_mix_00017539	chr12	+	1683	12	FSM	ENSG00000008323.16	ENST00000536531.5	1683	12	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_10	13.8528273809458	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTCTCCTCCATCCAGA	12	True	NA	NA	False	AATAAA	-16	NA	6310737	6318973	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6310849_6312158_6312365_6313628_6313785_6315004_6315170_6315553_6315650_6315868_6315920_6316254_6316405_6317302_6317414_6317546_6317697_6317856_6317995_6318300_6318421_6318744
H1_mix_00017540	chr12	+	773	3	FSM	ENSG00000111321.11	ENST00000546296.5	783	3	0	10	0	-10	multi-exon	FALSE	canonical	1	1	junction_1	10.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGGGGATGTGCCTGC	NA	False	NA	NA	False	NA	NA	NA	6375044	6385147	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6375595_6384587_6384685_6385021
H1_mix_00017541	chr12	+	2135	10	FSM	ENSG00000111321.11	ENST00000228918.9	2134	10	-1	0	-1	0	multi-exon	FALSE	canonical	3	15	junction_7	2.39340658094867	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAATTTATTTTCTTGGGA	-36	True	NA	6	True	AATAAA	-15	NA	6384160	6391566	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6384455_6384587_6384685_6385021_6385148_6385226_6385380_6386065_6386163_6386346_6386445_6388397_6388506_6388799_6388826_6390111_6390341_6390659
H1_mix_00017542	chr12	+	360	1	FSM	ENSG00000256913.1	ENST00000541242.1	2494	1	185	1949	185	-1949	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCGGGCCGCCTTCCTGG	NA	False	NA	NA	False	AAGAAA	-2	NA	6477898	6478258	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6477900_6478300
H1_mix_00017544	chr12	+	4855	32	FSM	ENSG00000010292.13	ENST00000315579.10	4825	32	-30	0	-21	0	multi-exon	TRUE	canonical	3	353	junction_6	68.1889094158698	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTTTTTCCTAAGCTTG	73	False	NA	31	True	AATAAA	-19	NA	6494071	6531955	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6494155_6495075_6495226_6509716_6509793_6510074_6510134_6510628_6510811_6511109_6511253_6514264_6514393_6514463_6514588_6514772_6514921_6516827_6517026_6517364_6517500_6517595_6517684_6517778_6517960_6520985_6521111_6521797_6522038_6522827_6523003_6523261_6523347_6525582_6525717_6526067_6526201_6526286_6526372_6526447_6526616_6526890_6527064_6527776_6527889_6527967_6528092_6528172_6528329_6528678_6528857_6528944_6529040_6529512_6529594_6529774_6529959_6530690_6530818_6530920_6531077_6531326
H1_mix_00017545	chr12	+	389	1	FSM	ENSG00000239002.3	ENST00000459255.1	330	1	18	-77	18	77	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTATCCCGCCACTCCCAG	17	False	NA	NA	False	NA	NA	NA	6510239	6510628	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6510200_6510600
H1_mix_00017546	chr12	+	1370	9	FSM	ENSG00000111640.15	ENST00000396861.5	1348	9	-22	0	0	0	multi-exon	FALSE	canonical	3	325	junction_1	8060.79010938134	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTCAACCAGTTACTTG	-7	True	NA	19	True	AATAAA	-7	NA	6534511	6538359	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6534662_6534809_6534862_6536493_6536594_6536683_6536791_6536919_6537011_6537100_6537217_6537308_6537391_6537583_6537997_6538100
H1_mix_00017547	chr12	+	1290	9	FSM	ENSG00000111640.15	ENST00000229239.10	1285	9	-5	0	0	0	multi-exon	FALSE	canonical	3	20749	junction_1	1451.7009635252	5949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACTTGTCCTGTCTTATT	-7	True	NA	31	True	AATAAA	-19	NA	6534511	6538371	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6534570_6534809_6534862_6536493_6536594_6536683_6536791_6536919_6537011_6537100_6537217_6537308_6537391_6537583_6537997_6538100
H1_mix_00017548	chr12	+	1363	7	FSM	ENSG00000111640.15	ENST00000466588.5	1363	7	0	0	0	0	multi-exon	FALSE	canonical	3	23617	junction_3	736.142139807252	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGGAGCCGCACCTTGTC	200	False	NA	-23	True	NA	NA	NA	6534753	6538317	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6534862_6536493_6536594_6536683_6537011_6537100_6537217_6537308_6537391_6537583_6537997_6538100
H1_mix_00017549	chr12	+	1256	8	FSM	ENSG00000111640.15	ENST00000396859.5	1256	8	0	0	0	0	multi-exon	FALSE	canonical	3	23617	junction_4	739.137086509033	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACCATCAATAAAGTACCC	200	False	NA	-1	True	NA	NA	NA	6534753	6538339	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6534862_6536493_6536594_6536683_6536791_6536919_6537011_6537100_6537217_6537308_6537391_6537583_6537997_6538100
H1_mix_00017550	chr12	+	1720	4	FSM	ENSG00000111640.15	ENST00000466525.1	1720	4	0	0	0	0	multi-exon	FALSE	canonical	3	24196	junction_3	376.689379846166	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTACCATCAATAAAGTAC	238	False	NA	-3	True	NA	NA	NA	6534791	6538337	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6534862_6536493_6536594_6536683_6537997_6538100
H1_mix_00017551	chr12	+	1292	8	FSM	ENSG00000111640.15	ENST00000396858.5	1292	8	0	0	0	0	multi-exon	FALSE	canonical	3	808	junction_1	8372.99439281078	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTAGGGAGCCGCACCTTG	11	True	NA	-25	True	NA	NA	NA	6535301	6538315	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6535470_6536493_6536594_6536683_6536791_6536919_6537011_6537100_6537217_6537308_6537391_6537583_6537997_6538100
H1_mix_00017552	chr12	+	1731	7	FSM	ENSG00000111652.10	ENST00000455113.6	1718	7	-13	0	12	0	multi-exon	FALSE	canonical	3	61	junction_2	141.209950074349	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAATATGACGCAGAAATAA	-7	True	NA	-13	True	ATTAAA	-32	NA	6724025	6731821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6724180_6724613_6724819_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
H1_mix_00017553	chr12	+	2276	8	FSM	ENSG00000111652.10_ENSG00000270068.1	ENST00000543155.6	1831	8	-503	58	310	0	multi-exon	FALSE	canonical	3	263	junction_1	58.7426070033585	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATATATCTATATATAATA	6558	False	NA	11	True	ATTAAA	-18	NA	6723542	6731807	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6724180_6724613_6724819_6727925_6728002_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
H1_mix_00017554	chr12	+	1721	8	FSM	ENSG00000111652.10	ENST00000229251.7	1721	8	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	120.55754828703	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATATATCTATATATAATA	38	False	NA	11	True	ATTAAA	-18	NA	6724070	6731807	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6724153_6724613_6724819_6727925_6728002_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
H1_mix_00017555	chr12	+	1840	8	FSM	ENSG00000111652.10	ENST00000539735.5	1832	8	-8	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	124.354168340565	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACGCAGAAATAAATCTATG	38	False	NA	-6	True	ATTAAA	-39	NA	6724070	6731828	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6724251_6724613_6724819_6727925_6728002_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
H1_mix_00017557	chr12	+	2049	7	FSM	ENSG00000111652.10	ENST00000534947.5	2034	7	-15	0	-15	0	multi-exon	FALSE	canonical	3	383	junction_1	21.7842960766593	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTATCTTCTGTGTTTG	-17	True	NA	41	True	AATAAA	-34	NA	6724271	6731875	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6724819_6727925_6728002_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
H1_mix_00017559	chr12	+	820	5	FSM	ENSG00000159335.18	ENST00000540667.5	820	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	849.853038766115	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGAGCCCCACAGCTGCCC	15	False	NA	-27	True	NA	NA	NA	6765515	6770875	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6765639_6769602_6769675_6769920_6770000_6770156_6770219_6770391
H1_mix_00017560	chr12	+	1653	5	FSM	ENSG00000159335.18	ENST00000389462.8	773	5	-503	-377	356	0	multi-exon	FALSE	canonical	3	58	junction_2	840.894464246257	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGAGCCCCACAGCTGCCC	371	False	NA	-27	True	NA	NA	NA	6765871	6770875	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6766751_6769602_6769675_6769843_6770000_6770156_6770219_6770391
H1_mix_00017561	chr12	+	1162	5	FSM	ENSG00000159335.18	ENST00000309083.8	1162	5	0	0	0	0	multi-exon	FALSE	canonical	3	1733	junction_2	184.005944197463	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTCCTGCTTTCCCGG	1	True	NA	30	True	AATAAA	-26	NA	6766362	6770952	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6766751_6769602_6769675_6769920_6770000_6770156_6770219_6770391
H1_mix_00017562	chr12	+	1977	8	FSM	ENSG00000089692.9	ENST00000203629.3	1976	8	-1	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	5.46230122694433	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGTCTGGCTCTTTCT	-8	True	NA	7	True	AATAAA	-18	NA	6772518	6778455	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6772911_6773191_6773340_6773696_6774002_6774594_6774865_6775272_6775549_6777263_6777507_6777790_6777922_6778243
H1_mix_00017564	chr12	+	1677	3	NNC	ENSG00000010610.10	novel	3049	10	NA	NA	4499	10	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTCGTGTGTGTGTGTGT	4	True	NA	15	True	AATAAA	-27	NA	6818552	6820809	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_6818651_6818846_6818915_6819298
H1_mix_00017567	chr12	+	2495	5	FSM	ENSG00000250510.8	ENST00000311268.8	2495	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	5.06828373317832	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGTGTCCAGTGTACTG	-10	True	NA	11	True	ATTAAA	-23	NA	6821820	6827421	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6821901_6823467_6824766_6825483_6825674_6826195_6826354_6826652
H1_mix_00017568	chr12	+	2631	15	FSM	ENSG00000110811.20	ENST00000290510.10	2631	15	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	18.2561144355998	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGGGCCAGTCAAGTGT	-3	True	NA	19	True	AATAAA	-19	NA	6828406	6839847	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6828939_6829858_6830012_6830352_6830555_6830638_6830771_6831215_6831353_6831824_6831915_6833591_6833645_6833741_6833810_6833924_6834050_6836984_6837087_6837422_6837574_6837731_6837850_6837957_6838034_6838999_6839141_6839296
H1_mix_00017569	chr12	+	2851	9	FSM	ENSG00000111664.11	ENST00000540458.5	2869	9	18	0	18	0	multi-exon	FALSE	canonical	1	2	junction_1	11.5318851451096	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTGATGTTTGCCTTC	2884	False	NA	23	True	AATAAA	-17	NA	6839971	6847393	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6841034_6841257_6841625_6842969_6843077_6843173_6843238_6843362_6843526_6843631_6843699_6843776_6843979_6845585_6845803_6846791
H1_mix_00017571	chr12	+	3334	20	FSM	ENSG00000111667.14	ENST00000389231.9	3083	20	-251	0	-251	0	multi-exon	FALSE	canonical	3	663	junction_1	55.5018404526265	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACGGCTAAATTGTGTCC	408	False	NA	4	True	AATAAA	-4	NA	6851896	6866620	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6852291_6855400_6855527_6855754_6855822_6856016_6856151_6856304_6856451_6856706_6856892_6857628_6857724_6858423_6858618_6859469_6859542_6860150_6860239_6860365_6860492_6860952_6861107_6861442_6861618_6862469_6862559_6863185_6863309_6863829_6863974_6864049_6864196_6864721_6864876_6865163_6865249_6865983
H1_mix_00017572	chr12	+	3296	20	FSM	ENSG00000111667.14	ENST00000229268.13	3162	20	-146	12	-144	0	multi-exon	FALSE	canonical	3	49	junction_15	170.796066696198	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACGGCTAAATTGTGTCC	515	False	NA	4	True	AATAAA	-4	NA	6852003	6866620	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6852291_6855400_6855527_6855754_6855822_6856016_6856151_6856304_6856451_6856706_6856892_6857628_6857724_6858423_6858618_6859469_6859542_6860150_6860239_6860365_6860492_6860952_6861107_6861442_6861618_6862469_6862559_6863185_6863378_6863829_6863974_6864049_6864196_6864721_6864876_6865163_6865249_6865983
H1_mix_00017574	chr12	+	1763	7	FSM	ENSG00000111669.15	ENST00000229270.8	1763	7	0	0	0	0	multi-exon	FALSE	canonical	3	10131	junction_6	486.203575333077	1229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTACTATTTTTACTTG	NA	False	NA	26	True	AAGAAA	-35	NA	6867118	6870948	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6867682_6868863_6868988_6869098_6869184_6869257_6869391_6869687_6869774_6870048_6870137_6870264
H1_mix_00017575	chr12	+	2059	7	FSM	ENSG00000111669.15	ENST00000535434.5	1587	7	-583	111	0	-111	multi-exon	FALSE	canonical	3	182	junction_1	3990.89998204248	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGTTTGTCTGCCTT	3	True	NA	19	True	AATAAA	-13	NA	6867530	6870828	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6868510_6868863_6868988_6869098_6869184_6869257_6869391_6869687_6869774_6870048_6870137_6870264
H1_mix_00017577	chr12	+	1438	3	FSM	ENSG00000240370.6	ENST00000412023.5	1438	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	5.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTAGGCTCGAGCCGCTG	713	False	NA	NA	False	NA	NA	NA	6873388	6884616	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6873782_6882195_6882328_6883703
H1_mix_00017578	chr12	+	2004	4	FSM	ENSG00000248593.3_ENSG00000240370.6	ENST00000421824.1	845	4	-114	-1045	63	0	multi-exon	FALSE	canonical	3	28	junction_3	7.40870359029762	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGAGCTGTCTTGTCATCT	21	False	NA	20	True	AATAAA	-31	NA	6873541	6885786	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6873782_6882195_6882328_6883703_6883920_6884370
H1_mix_00017580	chr12	+	1174	7	FSM	ENSG00000010626.15	ENST00000323702.9	1208	7	34	0	1	0	multi-exon	FALSE	canonical	2	5	junction_6	3.19722101554181	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTGTGTCTGACCGGGT	33	True	NA	4	True	AATAAA	-14	NA	6904874	6914228	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6904904_6905584_6905760_6905844_6905955_6906408_6906663_6907314_6907446_6909889_6910027_6913890
H1_mix_00017581	chr12	+	1504	8	FSM	ENSG00000010626.15	ENST00000443597.7	1698	8	194	0	5	0	multi-exon	FALSE	canonical	1	3	junction_1	4.26662414944802	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTGTCTGACCGGGTT	21	True	NA	5	True	AATAAA	-15	NA	6905015	6914229	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6905076_6905584_6905760_6905844_6905955_6906408_6906663_6907314_6907446_6909889_6910027_6912729_6913028_6913890
H1_mix_00017582	chr12	+	547	6	FSM	ENSG00000111674.9	ENST00000537688.5	547	6	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	123.407293139425	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCCGGGGCCGGGAGAA	8024	False	NA	NA	False	NA	NA	NA	6913744	6917107	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6913843_6914532_6914660_6915820_6915918_6916416_6916513_6916670_6916730_6917037
H1_mix_00017583	chr12	+	2623	12	FSM	ENSG00000111674.9	ENST00000541477.5	2549	12	-51	-23	-51	21	multi-exon	TRUE	canonical	3	47	junction_1	91.1093249393776	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTAGTCCCTATGAGGGGA	379	False	NA	48	True	ATTAAA	-38	NA	6914275	6923719	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6914660_6915817_6915918_6916416_6916513_6916670_6916730_6917037_6917108_6917580_6917715_6917939_6918163_6919565_6919764_6921580_6921783_6922055_6922165_6922343_6922403_6922730
H1_mix_00017585	chr12	+	2359	12	FSM	ENSG00000111674.9	ENST00000229277.6	2294	12	0	-65	0	64	multi-exon	FALSE	canonical	3	201	junction_1	51.9702712222006	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTGAAACTGGATAGCAGA	-7	True	NA	91	True	NA	NA	NA	6914579	6923762	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6914660_6915820_6915918_6916416_6916513_6916670_6916730_6917037_6917108_6917580_6917715_6917939_6918163_6919565_6919764_6921580_6921783_6922055_6922165_6922343_6922403_6922730
H1_mix_00017586	chr12	+	2827	11	FSM	ENSG00000111674.9	ENST00000535366.5	2827	11	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_3	33.3466640010661	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTGTGTCTAAGGAGTC	108	False	NA	25	True	ATTAAA	-15	NA	6915206	6923696	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6915918_6916416_6916513_6916670_6916730_6917037_6917108_6917580_6917715_6917939_6918163_6919565_6919764_6921580_6921783_6922055_6922165_6922343_6922403_6922730
H1_mix_00017588	chr12	+	4715	10	FSM	ENSG00000111676.15	ENST00000396684.3	4702	10	-13	0	-13	0	multi-exon	FALSE	canonical	3	28	junction_1	42.4964777044398	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCTGTGACTATTCTTT	65	False	NA	37	True	AAAACA	-21	NA	6927945	6942321	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6928385_6933839_6934029_6934175_6934314_6934464_6934579_6935546_6937562_6937844_6938068_6938480_6939178_6940879_6941024_6941373_6941555_6941746
H1_mix_00017589	chr12	+	4522	10	NNC	ENSG00000111676.15	novel	4702	10	NA	NA	177	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	45.8518817686733	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCTGTGACTATTCTTT	144	False	NA	37	True	AAAACA	-21	NA	6928135	6942321	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_6928385_6933839_6934029_6934175_6934314_6934464_6934579_6935549_6937562_6937844_6938068_6938480_6939178_6940879_6941024_6941373_6941555_6941746
H1_mix_00017590	chr12	+	640	3	FSM	ENSG00000111678.11	ENST00000542222.1	640	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	506	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTGTCAGTCTCTTGC	502	False	NA	24	True	AATAAA	-17	NA	6943432	6946003	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6943663_6944475_6944653_6945770
H1_mix_00017591	chr12	+	680	3	FSM	ENSG00000111678.11	ENST00000537087.5	662	3	-18	0	-1	0	multi-exon	FALSE	canonical	3	179	junction_2	544.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTCAGTCTCTTG	-1	True	NA	23	True	AATAAA	-16	NA	6943815	6946002	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6944174_6944475_6944566_6945770
H1_mix_00017592	chr12	+	561	3	FSM	ENSG00000111678.11	ENST00000229281.6	561	3	0	0	0	0	multi-exon	FALSE	canonical	3	1016	junction_2	126	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTCAGTCTCTTG	0	True	NA	23	True	AATAAA	-16	NA	6944021	6946002	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6944174_6944475_6944653_6945770
H1_mix_00017593	chr12	+	551	3	FSM	ENSG00000111678.11	ENST00000540506.2	551	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	497	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTAGCCTTGGTGTCAGT	9	False	NA	17	True	AATAAA	-10	NA	6944121	6945996	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6944174_6944379_6944653_6945770
H1_mix_00017594	chr12	+	2159	16	FSM	ENSG00000111679.17	ENST00000399448.5	2159	16	0	0	0	0	multi-exon	TRUE	canonical	3	64	junction_6	36.2580872204932	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGCCTCTGAGCCCTTTG	5	True	NA	10	True	AATAAA	-18	NA	6946576	6961316	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6946740_6951608_6951732_6951982_6952178_6954804_6954995_6955150_6955268_6955371_6955486_6955659_6955757_6956141_6956222_6956418_6956569_6957653_6957786_6957918_6958074_6959926_6959995_6960087_6960240_6960343_6960436_6960805_6960946_6961125
H1_mix_00017595	chr12	+	2161	16	FSM	ENSG00000111679.17	ENST00000318974.14	2161	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	41.9372017293583	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGCCTCTGAGCCCTTTG	-40	True	NA	10	True	AATAAA	-18	NA	6951355	6961316	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6951521_6951608_6951732_6951982_6952178_6954804_6954995_6955150_6955268_6955371_6955486_6955659_6955757_6956141_6956222_6956418_6956569_6957653_6957786_6957918_6958074_6959926_6959995_6960087_6960240_6960343_6960436_6960805_6960946_6961125
H1_mix_00017596	chr12	+	364	2	FSM	ENSG00000257084.1	ENST00000537269.1	350	2	-23	9	-23	-9	multi-exon	FALSE	canonical	3	81	junction_1	0	437	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAGTCACTTGACCTGTC	5	True	NA	19	True	AATAAA	-33	NA	6963222	6964438	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6963349_6964200
H1_mix_00017597	chr12	+	4873	6	FSM	ENSG00000126749.16	ENST00000599672.6	4873	6	0	0	0	0	multi-exon	FALSE	canonical	3	517	junction_4	50.8385680364819	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCCTTCATTTCTTGG	-3	True	NA	14	True	AATAAA	-16	NA	6970912	6979936	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6971092_6974338_6974441_6974551_6974694_6975089_6975149_6975228_6975379_6975695
H1_mix_00017598	chr12	+	958	8	FSM	ENSG00000126749.16	ENST00000261406.7	958	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	289.222956155536	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAAAAGAATGCAGC	2	False	NA	NA	False	NA	NA	NA	6970941	6988260	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6971092_6974338_6974441_6974551_6974694_6975089_6975149_6975228_6975379_6983001_6983207_6987781_6987839_6988167
H1_mix_00017599	chr12	+	616	5	FSM	ENSG00000126749.16	ENST00000539196.2	616	5	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_4	235.086154420034	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTTGTTTTGGGGTTCC	121	False	NA	NA	False	NA	NA	NA	6971060	6975977	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6971092_6974338_6974441_6974551_6974694_6975089_6975149_6975695
H1_mix_00017600	chr12	+	2801	12	FSM	ENSG00000182326.16	ENST00000328916.7	2972	12	171	0	1	0	multi-exon	TRUE	canonical	3	18	junction_1	5.31487853899762	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTGACTTACCTCAT	NA	False	NA	7	True	AATAAA	-18	NA	7060685	7071032	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_7060878_7061751_7061918_7062474_7062683_7062889_7063068_7064266_7064393_7065099_7065300_7065816_7065971_7066517_7066634_7067038_7067118_7067642_7067772_7068455_7068531_7069854
H1_mix_00017605	chr12	+	3209	15	FSM	ENSG00000139197.11	ENST00000266563.9	3252	15	43	0	16	0	multi-exon	TRUE	canonical	3	30	junction_1	19.2072477816823	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGCTGGTCATGAAGCT	26	False	NA	48	True	AATAAA	-21	NA	7189626	7211483	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_7189751_7190361_7190525_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202611_7202705_7203431_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
H1_mix_00017606	chr12	+	3237	16	FSM	ENSG00000139197.11	ENST00000675855.1	3237	16	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	22.4881203206394	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGGAACTGATGTGGGT	-13	True	NA	24	True	AATAAA	-25	NA	7189685	7211459	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_7189751_7190361_7190525_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202240_7202352_7202611_7202705_7203431_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
H1_mix_00017608	chr12	+	3197	15	NIC	ENSG00000139197.11	novel	2105	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	24.7263595610607	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGGAACTGATGTGGGT	110	False	NA	24	True	AATAAA	-25	NA	7189844	7211459	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_7189981_7190361_7190525_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202611_7202705_7203431_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
H1_mix_00017610	chr12	+	2342	14	NNC	ENSG00000215009.6	novel	2349	13	NA	NA	-4471	9	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_6	15.2156101717745	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCAAGACAATTTCTTCT	NA	False	NA	11	True	AATAAA	-19	NA	7299600	7328728	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_7299796_7304282_7304533_7306532_7306744_7310538_7310747_7317136_7317281_7318025_7318183_7320724_7320805_7322417_7322542_7323233_7323315_7323458_7323561_7324272_7324401_7324498_7324599_7326975_7327096_7328286
H1_mix_00017612	chr12	+	1102	4	FSM	ENSG00000187569.3	ENST00000345088.3	1100	4	-2	0	-2	0	multi-exon	FALSE	canonical	2	8	junction_3	1.24721912892465	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCTTGATTTTATTCTT	-3	True	NA	NA	False	AATAAA	-27	NA	7711430	7717559	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_7711653_7715182_7715428_7716197_7716240_7716966
H1_mix_00017614	chr12	+	5182	4	FSM	ENSG00000111704.11	ENST00000229307.9	5182	4	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_3	62.8295754844449	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGTTAAGCATCTGAGAA	-4	True	NA	28	True	AATAAA	-19	NA	7789401	7799146	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_7789766_7792949_7793213_7794456_7794544_7794678
H1_mix_00017616	chr12	+	4966	4	NNC	ENSG00000111704.11	novel	5182	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_3	182.95050939773	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGTTAAGCATCTGAGAA	185	False	NA	28	True	AATAAA	-19	NA	7789614	7799146	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_7789766_7792949_7793213_7794456_7794544_7794681
H1_mix_00017617	chr12	+	1029	5	NNC	ENSG00000176654.12	novel	1982	6	NA	NA	-15	51	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2.8613807855649	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCTCCCCTCCTCCCA	8727	False	NA	NA	False	NA	NA	NA	7890785	7898954	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_7890851_7892580_7892727_7895476_7895740_7898264_7898352_7898486
H1_mix_00017618	chr12	+	509	1	Intergenic	novelGene_272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGTTAAGCACCTGGGAAA	NA	False	NA	NA	False	AATAAA	-20	NA	7905595	7906104	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_7905600_7906100
H1_mix_00017619	chr12	+	1047	2	FSM	ENSG00000255964.1	ENST00000429127.2	1069	2	0	22	0	-22	multi-exon	TRUE	non_canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCAAAGATGATGCCATGC	NA	False	NA	NA	False	NA	NA	NA	8015023	8016384	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8015663_8015976
H1_mix_00017622	chr12	+	2588	7	FSM	ENSG00000089818.18	ENST00000639071.1	2578	7	-10	0	-2	0	multi-exon	FALSE	canonical	3	188	junction_5	17.5949803447839	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAATAATGGTAATTAAAAA	-13	True	NA	-8	True	TATAAA	-18	NA	8082263	8097738	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8082384_8089935_8090037_8090194_8090300_8091768_8091851_8092675_8093056_8095600_8095704_8096041
H1_mix_00017623	chr12	+	4797	6	FSM	ENSG00000089818.18	ENST00000640648.1	5166	6	369	0	-2	0	multi-exon	FALSE	canonical	3	171	junction_3	20.6358910638722	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATGGTAATTAAAAATA	-13	True	NA	-6	True	TATAAA	-20	NA	8082263	8097740	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8082384_8089935_8090037_8090194_8092785_8092871_8093056_8095600_8095704_8096041
H1_mix_00017624	chr12	+	3434	6	FSM	ENSG00000089818.18	ENST00000537796.2	3418	6	-16	0	-2	0	multi-exon	FALSE	canonical	3	188	junction_4	19.0094713235271	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAAAAAGTGTCTCTTTT	-13	True	NA	13	True	ATTAAA	-4	NA	8082263	8097759	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8082384_8089935_8090037_8090194_8090300_8091768_8093056_8095600_8095704_8096041
H1_mix_00017625	chr12	+	2132	2	FSM	ENSG00000089818.18	ENST00000640091.1	2115	2	-17	0	-17	0	multi-exon	FALSE	canonical	3	188	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGGTGCAATAATGGTA	2297	False	NA	-16	True	TATAAA	-10	NA	8095260	8097730	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8095704_8096041
H1_mix_00017627	chr12	+	765	2	FSM	ENSG00000256552.2	ENST00000537764.1	620	2	-161	16	-161	-16	multi-exon	FALSE	canonical	3	10	junction_1	0	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCCTTCAGTTTCATTTC	552	False	NA	78	True	NA	NA	NA	8320219	8369539	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8320427_8368981
H1_mix_00017628	chr12	+	1664	9	FSM	ENSG00000166532.16	ENST00000544257.5	1589	9	0	-75	0	75	multi-exon	FALSE	canonical	2	11	junction_1	320.465067324038	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCCCTTTTTTTCTACT	36	False	NA	101	True	NA	NA	NA	8681690	8783170	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8681819_8713810_8714042_8749861_8750093_8751956_8752044_8753889_8754094_8773320_8773467_8777589_8777803_8780574_8780740_8782911
H1_mix_00017630	chr12	+	8720	7	NIC	ENSG00000166532.16	novel	5830	7	NA	NA	0	-2	intron_retention	FALSE	canonical	3	313	junction_1	288.001543205742	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATAACATAGCATGCCG	15	True	NA	14	True	AATAAA	-14	NA	8697921	8783083	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_8698298_8713810_8714042_8749861_8750093_8751956_8752044_8753889_8754094_8773320_8780740_8782911
H1_mix_00017631	chr12	+	4931	6	FSM	ENSG00000166532.16	ENST00000535829.6	4931	6	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_1	20.2227594556233	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACTGACTGCTTGCTTGC	12	True	NA	10	True	AATATA	-21	NA	8697990	8777191	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8698298_8713810_8714042_8749861_8750093_8751956_8752044_8753889_8754094_8773320
H1_mix_00017632	chr12	+	4484	8	NIC	ENSG00000166532.16	novel	1519	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	79	junction_6	299.267882182707	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAACATAGCATGCCGTG	9	False	NA	16	True	AATAAA	-16	NA	8698036	8783085	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_8698298_8713810_8714042_8749861_8750093_8751956_8752044_8753889_8754094_8773320_8773467_8777589_8780740_8782911
H1_mix_00017633	chr12	+	2872	3	FSM	ENSG00000166532.16	ENST00000510357.2	650	3	-2222	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	493.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCCGTGTGACTTGTTC	346	False	NA	26	True	AATAAA	-26	NA	8777589	8783095	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8780113_8780574_8780740_8782911
H1_mix_00017634	chr12	+	715	4	FSM	ENSG00000166532.16	ENST00000542232.6	640	4	0	-75	0	75	multi-exon	FALSE	canonical	3	61	junction_1	480.556852920535	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCCCTTTTTTTCTACT	346	False	NA	101	True	NA	NA	NA	8777589	8783170	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8777803_8780034_8780113_8780574_8780740_8782911
H1_mix_00017635	chr12	+	3757	2	FSM	ENSG00000166532.16	ENST00000504495.6	1893	2	-1789	-75	-348	75	multi-exon	FALSE	canonical	3	1110	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCCCTTTTTTTCTACT	619	False	NA	101	True	NA	NA	NA	8777241	8783170	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8780740_8782911
H1_mix_00017637	chr12	+	2143	2	FSM	ENSG00000249790.3	ENST00000514568.2	1972	2	-21	-150	0	150	multi-exon	FALSE	canonical	0	0	junction_1	0	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCAGCTTCACTCCTGA	33	False	NA	NA	False	NA	NA	NA	8788252	8795939	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8788761_8794304
H1_mix_00017638	chr12	+	545	2	Antisense	novelGene_ENSG00000256904.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	985	junction_1	0	93	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCTGCGTGAATTACTCT	9456	False	NA	33	True	AATAAA	-22	NA	8805134	8821095	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr12_+_8805430_8820845
H1_mix_00017639	chr12	+	5034	35	ISM	ENSG00000166535.20	ENST00000299698.12	5127	36	561	0	-331	0	3prime_fragment	FALSE	canonical	3	7	junction_1	10.1402364106399	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTTAGTTCTATGCATA	563	False	NA	17	True	AATAAA	-19	NA	8823181	8876787	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_8823366_8823719_8823883_8829726_8829780_8834661_8834683_8835506_8835667_8836254_8836340_8837439_8837567_8838335_8838451_8839112_8839223_8841368_8841537_8843133_8843362_8845441_8845503_8846076_8846223_8847548_8847699_8848719_8848915_8849668_8849760_8850159_8850275_8851783_8852013_8852209_8852337_8854127_8854250_8854779_8854832_8855508_8855593_8857163_8857341_8857506_8857589_8857945_8858103_8860880_8860956_8861134_8861298_8863793_8864009_8867841_8868058_8868229_8868358_8868536_8868628_8869134_8869204_8874424_8874528_8874970_8875013_8876057
H1_mix_00017644	chr12	+	4052	16	NNC	ENSG00000111752.11	novel	4292	16	NA	NA	0	-1	intron_retention	FALSE	canonical	3	717	junction_15	705.046494920725	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGTGAAAATGTGTTTAA	27	False	NA	21	True	ATTAAA	-20	NA	8914730	8941466	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_8914828_8917629_8917792_8919755_8919867_8920984_8921066_8921600_8921751_8922632_8922789_8930434_8930928_8932562_8933351_8933864_8934013_8934266_8934479_8935123_8935239_8936855_8936965_8937175_8937327_8937828_8938061_8939304_8939461_8940575
H1_mix_00017645	chr12	+	5347	15	NIC	ENSG00000111752.11	novel	5390	15	NA	NA	19	0	intron_retention	FALSE	canonical	3	272	junction_5	805.877756972901	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTGAAAATGTGTTTAAA	-18	True	NA	22	True	ATTAAA	-21	NA	8914527	8941467	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_8914828_8917629_8917792_8919755_8919867_8920984_8921066_8921600_8921751_8922656_8922789_8930434_8930928_8932562_8933351_8933864_8934013_8934266_8934479_8935123_8935239_8936855_8936965_8937175_8937327_8937828_8938061_8939304
H1_mix_00017646	chr12	+	641	6	FSM	ENSG00000111752.11	ENST00000544539.5	641	6	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_5	1245.07365243989	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTGGCTGCAGTCCAGCAG	-1	True	NA	NA	False	NA	NA	NA	8914772	8922720	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8914828_8917629_8917792_8919755_8919867_8920984_8921066_8921600_8921751_8922638
H1_mix_00017647	chr12	+	651	6	FSM	ENSG00000111752.11	ENST00000539063.5	642	6	-9	0	0	0	multi-exon	FALSE	canonical	3	72	junction_4	1257.21574918548	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCCTCTAGCCAGGCCC	-1	True	NA	NA	False	NA	NA	NA	8914772	8930544	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8914828_8917629_8917792_8919755_8919867_8920984_8921066_8922656_8922789_8930434
H1_mix_00017648	chr12	+	4964	14	NIC	ENSG00000111752.11	novel	5390	15	NA	NA	3	0	intron_retention	FALSE	canonical	3	324	junction_4	819.197695251473	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTGAAAATGTGTTTAAA	11	False	NA	22	True	ATTAAA	-21	NA	8914784	8941467	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_8914828_8917629_8917792_8919755_8919867_8920984_8921066_8922632_8922789_8930434_8930928_8932562_8933351_8933864_8934013_8934266_8934479_8935123_8935239_8936855_8936965_8937175_8937327_8937828_8938061_8939304
H1_mix_00017658	chr12	+	7744	5	Fusion	ENSG00000069493.15_ENSG00000213443.2	novel	850	5	NA	NA	-3185	-720	intron_retention	FALSE	canonical	1	1	junction_4	10.356157588604	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCCTCAACCTCTGTTTC	3248	False	NA	NA	False	ACTAAA	-24	NA	9677739	9698833	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr12_+_9681034_9687901_9688087_9692827_9692932_9693033_9693121_9694759
H1_mix_00017662	chr12	+	1883	4	FSM	ENSG00000139112.11	ENST00000266458.10	1883	4	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_3	12.8322510366134	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACTGAGTTCAGCAATGT	-31	True	NA	20	True	AATAAA	-21	NA	10212876	10223128	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_10213220_10218062_10218142_10220439_10220559_10221786
H1_mix_00017663	chr12	+	2400	4	FSM	ENSG00000139112.11	ENST00000546017.5	2294	4	-97	-9	-97	4	multi-exon	FALSE	canonical	3	20	junction_1	186.719635341927	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTTCAGCAATGTTGCC	296	False	NA	24	True	AATAAA	-25	NA	10213331	10223132	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_10214188_10218062_10218142_10220439_10220559_10221786
H1_mix_00017664	chr12	+	3099	2	FSM	ENSG00000245648.2	ENST00000665123.1	3388	2	-13	302	-13	-302	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACGTATTTGGAGTTGAAC	NA	False	NA	NA	False	NA	NA	NA	10363693	10373137	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_10364034_10370378
H1_mix_00017667	chr12	+	4843	1	FSM	ENSG00000256537.5	ENST00000622602.2	4823	1	-20	0	-20	0	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATTTTATGGTATTTTTT	-39	True	NA	8	True	AATAAA	-20	NA	11171173	11176016	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_11171200_11176000
H1_mix_00017675	chr12	+	6048	4	FSM	ENSG00000165714.11	ENST00000542728.5	580	4	-5	-5463	-4	13	multi-exon	FALSE	canonical	3	16	junction_1	40.9416929574514	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGTGATTTTCCAGTT	-9	True	NA	NA	False	AATAAA	-40	NA	12357073	12471246	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_12357119_12361205_12361350_12435627_12435786_12465545
H1_mix_00017676	chr12	+	6426	4	FSM	ENSG00000165714.11	ENST00000314565.9	6422	4	-4	0	-4	0	multi-exon	TRUE	canonical	3	70	junction_1	16.1314048434171	1691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTCCAGGACAATGCTG	-9	True	NA	NA	False	AATAAA	-27	NA	12357073	12471233	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_12357510_12361205_12361350_12435627_12435786_12465545
H1_mix_00017681	chr12	+	1827	12	FSM	ENSG00000213782.7	ENST00000358007.7	1817	12	-10	0	-10	0	multi-exon	FALSE	canonical	3	696	junction_6	52.3767344729469	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAACTCCTTAAAGACCT	5130	False	NA	29	True	AATAAA	-23	NA	12813335	12829981	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_12813455_12814130_12814225_12821207_12821397_12821654_12821727_12821964_12822084_12822660_12822733_12823202_12823320_12823869_12824017_12824539_12824678_12825999_12826071_12827245_12827376_12829422
H1_mix_00017684	chr12	+	4711	13	FSM	ENSG00000084444.14	ENST00000197268.13	4711	13	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_10	5.87130498460285	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTTGTGTGCCATTCTC	-9	True	NA	14	True	AATAAA	-18	NA	13044380	13083449	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_13044441_13055550_13055947_13058450_13058550_13061574_13061764_13062844_13062976_13066639_13066788_13067154_13067297_13068303_13068448_13068629_13068712_13071240_13071397_13076025_13076144_13079788_13080010_13080624
H1_mix_00017685	chr12	+	4941	13	FSM	ENSG00000171681.13	ENST00000543189.5	4887	13	-54	0	-37	0	multi-exon	FALSE	canonical	3	88	junction_2	75.9850131422126	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCACTGACTCAAATGTT	0	True	NA	5	True	ATTAAA	-19	NA	14365638	14482653	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_14365828_14423908_14425474_14434339_14434424_14436105_14436252_14438129_14438268_14446987_14447054_14456560_14456635_14457206_14457296_14460494_14461134_14466525_14466591_14475889_14475969_14478316_14478473_14481002
H1_mix_00017686	chr12	+	8845	15	FSM	ENSG00000171681.13	ENST00000261168.9	8823	15	-22	0	-16	0	multi-exon	FALSE	canonical	3	260	junction_2	40.3800819762437	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTGAGTACTCTGATTA	21	False	NA	35	True	AATAAA	-17	NA	14365659	14502930	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_14365828_14423908_14425474_14434336_14434424_14436105_14436252_14438129_14438268_14446987_14447054_14456560_14456635_14457206_14457296_14460494_14461134_14466525_14466591_14475889_14475969_14478316_14478473_14481002_14481186_14496230_14496344_14497653
H1_mix_00017687	chr12	+	8774	15	FSM	ENSG00000171681.13	ENST00000536444.5	8774	15	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	74.0828273361813	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGAGTACTCTGATTAA	50	False	NA	36	True	AATAAA	-18	NA	14365728	14502931	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_14365828_14423908_14425474_14434339_14434424_14436105_14436252_14438129_14438268_14446987_14447054_14456560_14456635_14457206_14457296_14460494_14461134_14466525_14466591_14475889_14475969_14478316_14478473_14481002_14481186_14496230_14496344_14497653
H1_mix_00017688	chr12	+	4812	15	FSM	ENSG00000171681.13	ENST00000544627.5	4847	15	35	0	35	0	multi-exon	FALSE	canonical	1	4	junction_1	94.3420827172507	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCGTTGTTGCTTAGTCT	NA	False	NA	NA	False	AATAAA	-19	NA	14385098	14498763	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_14385401_14423908_14425474_14434336_14434424_14436105_14436252_14438129_14438268_14446987_14447054_14456560_14456635_14457206_14457296_14460494_14461134_14466525_14466591_14475889_14475969_14478316_14478473_14481002_14481186_14496230_14496344_14497653
H1_mix_00017692	chr12	+	604	3	NNC	ENSG00000214772.2	novel	657	5	NA	NA	44469	34	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	7	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAGGTGAGAGGATCACC	NA	False	NA	NA	False	NA	NA	NA	14710123	14757997	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_14710236_14718034_14718076_14757546
H1_mix_00017694	chr12	+	1556	2	FSM	ENSG00000182993.5	ENST00000330828.3	1586	2	-12	42	-8	-42	multi-exon	FALSE	canonical	3	21	junction_1	0	341	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTTTATTTAAAGAAATGA	-18	True	NA	NA	False	AAAACA	-27	NA	14803657	14824373	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_14803752_14822911
H1_mix_00017695	chr12	+	6327	26	FSM	ENSG00000151490.15	ENST00000674316.1	6403	26	76	0	-31	0	multi-exon	TRUE	canonical	0	0	junction_11	3.44464802265776	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACATGGATATACAACAGA	2	True	NA	NA	False	GATAAA	-11	NA	15322332	15597323	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_15322802_15483973_15484248_15497244_15497404_15499441_15499595_15501619_15502064_15503907_15504070_15508570_15508768_15515497_15515619_15516762_15516957_15520200_15520313_15524813_15524966_15526141_15526263_15546568_15546709_15549093_15549227_15551550_15551672_15557454_15557524_15560192_15560277_15565592_15565629_15569416_15569499_15578852_15578944_15580038_15580116_15580696_15580832_15581678_15581802_15586896_15587052_15589454_15589591_15594936
H1_mix_00017696	chr12	+	2799	9	FSM	ENSG00000023734.11	ENST00000541731.1	1698	9	-101	-1000	-97	964	multi-exon	FALSE	canonical	3	84	junction_1	834.669161629325	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGGAATCATGAAGTTGC	288	False	NA	16	True	AATAAA	-16	NA	15882289	15904442	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_15882820_15889927_15890010_15890596_15890670_15894046_15894144_15895358_15895497_15897881_15898019_15899903_15900054_15900946_15901013_15902916
H1_mix_00017697	chr12	+	1935	10	FSM	ENSG00000023734.11	ENST00000419869.7	1874	10	-97	36	-97	0	multi-exon	FALSE	canonical	3	2342	junction_5	133.778239201862	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAGTTGTCTAAATAAAA	288	False	NA	53	True	NA	NA	NA	15882289	15903442	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_15882820_15883540_15883677_15889927_15890010_15890596_15890670_15894046_15894144_15895358_15895497_15897881_15898019_15899903_15900054_15900946_15901013_15902916
H1_mix_00017699	chr12	+	1562	8	FSM	ENSG00000023697.13	ENST00000532964.5	854	8	-83	-625	-22	-5	multi-exon	FALSE	canonical	3	25	junction_5	169.353753656513	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGTCTCTGAATCTCTC	8371	False	NA	106	True	ATTAAA	-20	NA	15911279	16037376	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_15911415_15956935_15957034_15958187_15958336_15959828_15959925_15962812_15962948_16032541_16032655_16036231_16036382_16036689
H1_mix_00017700	chr12	+	1851	7	FSM	ENSG00000023697.13	ENST00000526521.5	745	7	-22	-1084	-22	-5	multi-exon	FALSE	canonical	2	35	junction_2	177.118369083127	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGTCTCTGAATCTCTC	8371	False	NA	106	True	ATTAAA	-20	NA	15911279	16037376	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_15911415_15956935_15957034_15959828_15959925_15962812_15962948_15982307_15982437_16032541_16032655_16036231
H1_mix_00017702	chr12	+	1643	9	FSM	ENSG00000023697.13	ENST00000428559.7	1644	9	-3	4	0	-4	multi-exon	FALSE	canonical	3	451	junction_4	28.8920404263873	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCTCTGAATCTCTCT	-21	True	NA	107	True	ATTAAA	-21	NA	15911328	16037377	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_15911415_15956935_15957034_15958187_15958336_15959828_15959925_15962812_15962948_15982307_15982437_16032541_16032655_16036231_16036382_16036689
H1_mix_00017704	chr12	+	279	2	FSM	ENSG00000008394.13	ENST00000534835.5	279	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCCGCAACATGGCCACC	-6	True	NA	NA	False	NA	NA	NA	16347644	16349106	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_16347711_16348893
H1_mix_00017707	chr12	+	909	4	FSM	ENSG00000008394.13	ENST00000396207.1	909	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	1711.86214398239	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTTTGGTTTTATTTT	5639	False	NA	26	True	AATAAA	-15	NA	16353416	16364409	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_16353468_16354230_16354379_16357604_16357700_16363794
H1_mix_00017708	chr12	+	655	2	FSM	ENSG00000008394.13	ENST00000535624.1	655	2	0	0	0	0	multi-exon	FALSE	canonical	3	3802	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGTACTTTCTTATAAAT	3175	False	NA	33	True	NA	NA	NA	16357510	16364260	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_16357700_16363794
H1_mix_00017709	chr12	+	1842	1	FSM	ENSG00000008394.13	ENST00000624056.1	1842	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTTTGGTTTTATTTT	3759	False	NA	26	True	AATAAA	-15	NA	16362567	16364409	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_16362600_16364400
H1_mix_00017710	chr12	+	453	1	FSM	ENSG00000227525.4	ENST00000480903.1	738	1	370	-85	370	85	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCAGACTGCGACAATTT	386	False	NA	NA	False	AATAAA	-40	NA	19089520	19089973	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_19089500_19090000
H1_mix_00017717	chr12	+	6045	8	FSM	ENSG00000139154.16	ENST00000266508.14	5830	8	0	-215	0	203	multi-exon	FALSE	canonical	3	121	junction_1	10.7133332910015	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTAATCTGAAAATTGAAA	-23	True	NA	NA	False	NA	NA	NA	19439491	19522442	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_19440371_19462509_19462718_19473247_19473356_19493799_19493987_19500096_19500222_19512397_19512466_19514670_19514785_19518086
H1_mix_00017718	chr12	+	5281	9	FSM	ENSG00000139154.16	ENST00000398864.7	5099	9	-182	0	0	0	multi-exon	FALSE	canonical	3	31	junction_8	37.3243804369209	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTTGTAACACTGCAGT	-23	True	NA	NA	False	ATTAAA	-29	NA	19439491	19522239	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_19440371_19462509_19462718_19473247_19473356_19493799_19493987_19500096_19500222_19512397_19512466_19514670_19514785_19518086_19518114_19518674
H1_mix_00017720	chr12	+	12533	16	FSM	ENSG00000172572.7	ENST00000359062.4	12486	16	24	-71	24	71	multi-exon	FALSE	canonical	2	9	junction_7	3.31595469745224	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACCATGGTGTGGTACC	24	True	NA	NA	False	NA	NA	NA	20368560	20688654	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_20370245_20556659_20556711_20613442_20613701_20616229_20616385_20621295_20621412_20629907_20630128_20633692_20633779_20634901_20635057_20637099_20637238_20639845_20639958_20646489_20646604_20646750_20646951_20648687_20648892_20650444_20650601_20653946_20654206_20680029
H1_mix_00017721	chr12	+	2973	1	FSM	ENSG00000256663.1	ENST00000540175.1	1423	1	-165	-1385	-165	1385	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTAATTTTTTTTTTA	0	True	NA	NA	False	AATAAA	-22	NA	20551424	20554397	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_20551400_20554400
H1_mix_00017725	chr12	+	3173	6	FSM	ENSG00000111711.10	ENST00000539025.5	1210	6	-43	-1920	-3	-249	multi-exon	FALSE	canonical	3	26	junction_2	215.259842980524	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGGTCAAGTATATCTG	-21	True	NA	25	True	AATAAA	-19	NA	21501785	21518159	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_21501949_21506884_21506977_21507943_21508110_21508382_21508562_21512294_21512377_21515668
H1_mix_00017727	chr12	+	1709	3	FSM	ENSG00000134548.11	ENST00000535139.5	1826	3	114	3	16	-3	multi-exon	FALSE	canonical	3	6	junction_2	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATAATAGGCACCTGTCA	-8	True	NA	NA	False	ATTAAA	-14	NA	21527548	21532520	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_21527790_21529000_21529085_21531136
H1_mix_00017729	chr12	+	1582	7	FSM	ENSG00000111726.13	ENST00000534981.5	1575	7	-7	0	0	0	multi-exon	TRUE	canonical	3	48	junction_5	388.465642696437	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTTGTTGCTCTAGAAG	-7	True	NA	26	True	AATAAA	-27	NA	22046217	22065674	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_22046564_22055148_22055292_22055454_22055611_22058566_22058701_22060831_22060927_22062280_22062435_22065120
H1_mix_00017731	chr12	+	1062	3	FSM	ENSG00000139163.16	ENST00000673496.1	1231	3	-211	380	0	-380	multi-exon	FALSE	canonical	3	12	junction_2	63	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATCTGTGACGCCCTCC	12	True	NA	2	True	AATAAA	-14	NA	22625170	22656817	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_22625587_22643762_22644023_22656431
H1_mix_00017732	chr12	+	7078	8	FSM	ENSG00000139163.16	ENST00000266517.9	7063	8	-15	0	14	0	multi-exon	TRUE	canonical	3	89	junction_4	16.4788051875178	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTATTCATAAATTTTATT	-3	True	NA	11	True	AATAAA	-37	NA	22625155	22690665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_22625587_22643762_22644023_22659013_22659155_22661062_22661206_22671271_22671356_22673499_22673661_22684482_22684557_22684881
H1_mix_00017734	chr12	+	3830	2	NNC	ENSG00000139163.16	novel	7063	8	NA	NA	15774	3829	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGGAAAGCAGCCCCAA	NA	False	NA	NA	False	NA	NA	NA	22686859	22694494	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_22690661_22694465
H1_mix_00017737	chr12	+	2508	11	NIC	ENSG00000256995.8	novel	647	5	NA	NA	-167	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	28.4255167059457	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAATTTATAAAGGAAAGAG	3500	False	NA	8	True	AATAAA	-18	NA	22699691	23174124	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_22700095_22861068_22861225_22887963_22888045_22969362_22969466_22970835_22971095_22972375_22972469_23046107_23046202_23053990_23054324_23057165_23057298_23057779_23057898_23173388
H1_mix_00017739	chr12	+	1315	3	Fusion	ENSG00000256923.1_ENSG00000256995.8	novel	424	2	NA	NA	2	619	multi-exon	TRUE	canonical	1	4	junction_2	7.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCTTGTTTTGGTTTTG	1	True	NA	NA	False	NA	NA	NA	22699860	22743710	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr12_+_22700095_22742543_22742633_22742718
H1_mix_00017741	chr12	+	2171	11	NIC	ENSG00000256995.8	novel	2064	12	NA	NA	6	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	33.5714164133717	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTTATAAAGGAAAGAGG	13	False	NA	9	True	AATAAA	-19	NA	22859480	23174125	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_22859546_22861068_22861225_22887963_22888045_22969362_22969466_22970835_22971095_22972375_22972469_23046107_23046202_23053990_23054324_23057165_23057298_23057779_23057898_23173388
H1_mix_00017742	chr12	+	1238	3	FSM	ENSG00000205707.11	ENST00000557540.7	1259	3	21	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	53.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCTGCATAAAAGATTCAC	-3	True	NA	130	True	AATAAA	-14	NA	25195236	25205135	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_25195342_25203919_25204008_25204090
H1_mix_00017745	chr12	+	509	3	FSM	ENSG00000123094.16	ENST00000538081.5	509	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	20.5	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTAAATATAAAATAAACCA	148	False	NA	NA	False	AATAGA	-2	NA	25959057	26020468	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_25959149_25995036_25995131_26020144
H1_mix_00017746	chr12	+	523	4	FSM	ENSG00000123094.16	ENST00000535907.5	523	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	33.6286914537109	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGGCTCGAATTCCTGA	148	False	NA	NA	False	NA	NA	NA	25959057	26064667	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_25959149_25995036_25995131_26055278_26055447_26064497
H1_mix_00017748	chr12	+	5510	5	FSM	ENSG00000123094.16	ENST00000405154.6	5510	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	42.1485468314152	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGTTGTCAGTTTGTTT	148	False	NA	NA	False	AATAAA	-22	NA	25959057	26072869	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_25959149_26055235_26055447_26064497_26065388_26067568_26067714_26068696
H1_mix_00017749	chr12	+	5417	5	NIC	ENSG00000123094.16	novel	5510	5	NA	NA	43	0	intron_retention	FALSE	canonical	3	34	junction_1	37.0337683742824	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGTTGTCAGTTTGTTT	198	False	NA	NA	False	AATAAA	-22	NA	25959107	26072869	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_25959149_26055278_26055447_26064497_26065388_26067568_26067714_26068696
H1_mix_00017750	chr12	+	5604	6	FSM	ENSG00000123094.16	ENST00000689635.1	5980	6	376	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	39.2815478310109	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGTTGTCAGTTTGTTT	148	False	NA	NA	False	AATAAA	-22	NA	25959057	26072869	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_25959149_25995036_25995131_26055235_26055447_26064497_26065388_26067568_26067714_26068696
H1_mix_00017753	chr12	+	2932	7	FSM	ENSG00000111790.14	ENST00000229395.8	2932	7	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_5	54.2107512911928	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTCTCCAATTTAATTT	-4	True	NA	10	True	ATTAAA	-20	NA	26938469	26966648	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_26938711_26954144_26954294_26956542_26956661_26957600_26957744_26960514_26960629_26963341_26963456_26964595
H1_mix_00017754	chr12	+	956	5	FSM	ENSG00000111790.14	ENST00000546072.5	956	5	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_4	37.7458607002145	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGGTTTTATAGGTTATT	-11	True	NA	NA	False	NA	NA	NA	26938496	26960846	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_26938711_26954144_26954294_26956542_26956661_26957600_26957744_26960514
H1_mix_00017755	chr12	+	2793	6	FSM	ENSG00000111790.14	ENST00000327214.5	2790	6	-3	0	0	0	multi-exon	FALSE	canonical	3	98	junction_4	46.5978540278412	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTCTCCAATTTAATTTGA	-11	True	NA	12	True	ATTAAA	-22	NA	26938496	26966650	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_26938711_26954144_26954294_26956542_26956661_26957600_26957744_26963341_26963456_26964595
H1_mix_00017757	chr12	+	2677	4	FSM	ENSG00000152944.9	ENST00000282892.4	2669	4	-8	0	0	0	multi-exon	FALSE	canonical	3	512	junction_1	29.8923996285938	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACAGTTTGCTTTTTTCA	-15	True	NA	20	True	ATTAAA	-22	NA	27022549	27030673	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_27022622_27026419_27026535_27027346_27027448_27028284
H1_mix_00017758	chr12	+	571	6	FSM	ENSG00000152944.9	ENST00000546323.5	575	6	4	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	264.9425598125	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCTAAAGATTTCTGTGG	-15	True	NA	103	True	NA	NA	NA	27022549	27030756	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_27022622_27026419_27026535_27027346_27027448_27028284_27028430_27030157_27030273_27030733
H1_mix_00017760	chr12	+	752	7	FSM	ENSG00000211455.8	ENST00000545470.5	752	7	0	0	0	0	multi-exon	FALSE	canonical	1	79	junction_3	189.034755769644	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGACTTCTGTAAGTTTG	110	False	NA	NA	False	AAGAAA	-45	NA	27244232	27315106	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_27244333_27297709_27297855_27302136_27302189_27309113_27309198_27312548_27312673_27314503_27314659_27315014
H1_mix_00017761	chr12	+	4976	14	FSM	ENSG00000211455.8	ENST00000389032.8	4957	14	-19	0	0	0	multi-exon	FALSE	canonical	1	193	junction_7	91.4886742432794	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTTGATGAAGTTTTT	-6	True	NA	14	True	AATAAA	-17	NA	27244266	27325959	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_27244333_27297709_27297855_27302136_27302189_27308338_27308462_27309113_27309198_27312548_27312673_27314503_27314659_27315014_27315118_27315288_27315351_27317335_27317454_27317895_27318020_27319327_27319424_27322142_27322235_27322327
H1_mix_00017763	chr12	+	982	4	FSM	ENSG00000211455.8	ENST00000543992.1	982	4	0	0	0	0	multi-exon	FALSE	canonical	3	471	junction_1	18.8325958557674	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGTACTGGAATAAAAGG	NA	False	NA	-23	True	NA	NA	NA	27317581	27322683	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_27318020_27319327_27319424_27322142_27322235_27322327
H1_mix_00017765	chr12	+	7010	16	FSM	ENSG00000029153.15	ENST00000311001.9	1888	16	-223	-4899	-4	143	multi-exon	FALSE	canonical	2	9	junction_2	15.8234706124233	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCCAAAATCTCAGTGGT	-5	True	NA	NA	False	NA	NA	NA	27332831	27425432	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_27333104_27368261_27368413_27370128_27370231_27380246_27380405_27385480_27385561_27387227_27387321_27389178_27389297_27390095_27390240_27400533_27400775_27401256_27401364_27401523_27401675_27402618_27402678_27403432_27403542_27415868_27415948_27418087_27418197_27420395
H1_mix_00017766	chr12	+	1954	15	FSM	ENSG00000029153.15	ENST00000395901.6	1954	15	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	13.8027282130182	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGATTTTTAACTCCAAA	7	True	NA	-39	True	NA	NA	NA	27332919	27420533	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_27333137_27368261_27368413_27380246_27380405_27385480_27385561_27387227_27387321_27389178_27389297_27390095_27390240_27400533_27400775_27401256_27401364_27401523_27401675_27402618_27402678_27403432_27403542_27415868_27415948_27418087_27418197_27420395
H1_mix_00017767	chr12	+	4320	16	NNC	ENSG00000029153.15	novel	6785	16	NA	NA	0	143	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	14.8524595793274	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCCAAAATCTCAGTGGT	7	True	NA	NA	False	NA	NA	NA	27332919	27425432	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_27333104_27368261_27368413_27380246_27380405_27385480_27385561_27387227_27387321_27389178_27389297_27390095_27390240_27400533_27400775_27401256_27401364_27401523_27401675_27402618_27402678_27403432_27403542_27415868_27415948_27418087_27418197_27420395_27421088_27423587
H1_mix_00017769	chr12	+	1207	10	FSM	ENSG00000110841.14	ENST00000545381.5	1191	10	-16	0	-16	0	multi-exon	FALSE	canonical	2	21	junction_9	52.654006917275	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGTTTGGTGCATTTCC	NA	False	NA	NA	False	AAAAAG	-17	NA	27524125	27658848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_27524366_27578151_27578240_27633361_27633461_27634909_27635116_27646061_27646149_27647728_27647843_27650009_27650142_27654721_27654815_27656615_27656731_27658815
H1_mix_00017770	chr12	+	5990	28	NIC	ENSG00000110841.14	novel	5983	30	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	2	95	junction_9	27.1243137251752	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATTGCCCTTATTTCA	NA	False	NA	18	True	AATAAA	-21	NA	27524132	27695564	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_27524366_27578151_27578240_27633361_27633461_27634909_27635116_27646061_27646149_27647728_27647843_27650009_27650142_27654721_27654815_27656615_27656731_27660883_27660946_27664361_27664447_27667165_27667321_27671430_27671547_27672426_27672484_27673766_27673828_27674191_27674222_27676427_27676600_27679488_27679640_27679932_27680062_27681545_27681697_27682386_27682499_27682614_27682704_27687384_27687508_27688297_27688424_27689014_27689204_27691748_27691929_27692590_27692657_27692795
H1_mix_00017771	chr12	+	1610	5	NNC	ENSG00000110841.14	novel	2805	4	NA	NA	0	23	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	82.4086615593288	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTGGATGGGTAATGGC	-30	True	NA	NA	False	GATAAA	-43	NA	27524157	27637342	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_27524366_27578151_27578240_27633361_27633461_27634909_27635116_27636333
H1_mix_00017772	chr12	+	3039	4	FSM	ENSG00000110841.14	ENST00000545334.5	2805	4	-28	-206	-12	206	multi-exon	FALSE	canonical	3	148	junction_3	35.7988205888903	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTGTTGTTGCTAA	NA	False	NA	NA	False	AATAAA	-28	NA	27524129	27637525	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_27524366_27578151_27578240_27633361_27633461_27634909
H1_mix_00017780	chr12	+	1839	8	FSM	ENSG00000061794.13	ENST00000081029.8	1829	8	-10	0	0	0	multi-exon	FALSE	canonical	3	487	junction_5	43.54261342264	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCCTAATAGACTTATTT	1	True	NA	NA	False	AATAAA	-17	NA	27710821	27756295	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_27710956_27714779_27714821_27716290_27716459_27719807_27719869_27724046_27724187_27735446_27735557_27737538_27737609_27755180
H1_mix_00017781	chr12	+	1894	4	FSM	ENSG00000087448.11	ENST00000539176.1	1894	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	33.7671766990109	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAACATGACTGAATTGAA	166	False	NA	-6	True	AATAAA	-3	NA	27780047	27798156	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_27781203_27791707_27791902_27797246_27797350_27797714
H1_mix_00017782	chr12	+	6490	3	FSM	ENSG00000087448.11	ENST00000381271.7	6490	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	12.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTGTTATCTAAGTTCT	-33	True	NA	10	True	AATAAA	-15	NA	27780232	27803040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_27781203_27791707_27791902_27797714
H1_mix_00017784	chr12	+	2758	16	FSM	ENSG00000123106.11	ENST00000545336.5	2738	16	-20	0	-1	0	multi-exon	FALSE	canonical	3	16	junction_3	47.4252628411858	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTGTTACTTTTTGTT	0	True	NA	16	True	AATAAA	-18	NA	28190425	28550166	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_28190642_28225794_28225862_28226139_28226200_28255580_28255663_28257201_28257246_28259363_28259443_28305648_28305807_28306741_28306946_28307644_28307750_28362437_28362516_28391303_28391412_28450160_28450254_28450349_28450419_28452477_28452655_28484051_28484166_28549062
H1_mix_00017785	chr12	+	2522	13	FSM	ENSG00000123106.11	ENST00000536442.6	2519	13	-4	1	-4	0	multi-exon	FALSE	canonical	3	64	junction_1	24.6570927366189	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGTTGTTACTTTTTGT	-5	True	NA	15	True	AATAAA	-17	NA	28190451	28550165	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_28190642_28257201_28257246_28259363_28259443_28305648_28305807_28306741_28306946_28307644_28307750_28362437_28362516_28391303_28391412_28450160_28450254_28450349_28450419_28452477_28452655_28484051_28484166_28549062
H1_mix_00017786	chr12	+	2586	14	NIC	ENSG00000123106.11	novel	2738	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_2	40.7480351288735	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTGTTACTTTTTGTT	-1	True	NA	16	True	AATAAA	-18	NA	28190455	28550166	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_28190642_28225794_28225862_28257201_28257246_28259363_28259443_28305648_28305807_28306741_28306946_28307644_28307750_28362437_28362516_28391303_28391412_28450160_28450254_28450349_28450419_28452477_28452655_28484051_28484166_28549062
H1_mix_00017787	chr12	+	2392	11	NIC	ENSG00000123106.11	novel	2519	13	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	33.5292409696372	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATTTGGTTGTTACTTTT	-1	True	NA	12	True	AATAAA	-14	NA	28190455	28550162	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_28190642_28305648_28305807_28306741_28306946_28307644_28307750_28362437_28362516_28391303_28391412_28450160_28450254_28450349_28450419_28452477_28452655_28484051_28484166_28549062
H1_mix_00017788	chr12	+	2357	11	NIC	ENSG00000123106.11	novel	2519	13	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_2	46.5855127695295	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTGTTACTTTTTGTT	11	True	NA	16	True	AATAAA	-18	NA	28190467	28550166	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_28190642_28305648_28305780_28306741_28306946_28307644_28307750_28362437_28362516_28391303_28391412_28450160_28450254_28450349_28450419_28452477_28452655_28484051_28484166_28549062
H1_mix_00017792	chr12	+	2702	1	FSM	ENSG00000257599.4	ENST00000641955.1	5529	1	918	1909	570	-1909	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACAACGGCCTGTTGCAG	572	False	NA	NA	False	TTTAAA	-3	NA	29390206	29392908	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_29390200_29392900
H1_mix_00017799	chr12	+	3920	27	FSM	ENSG00000013573.17	ENST00000542838.6	3920	27	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	61.0150820427736	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTTATTGATATGTGCT	-15	True	NA	23	True	AATAAA	-24	NA	31073859	31104799	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_31074092_31078389_31078538_31083812_31084062_31084582_31084670_31084968_31085127_31087937_31087984_31089043_31089152_31089402_31089491_31089885_31090095_31091718_31091872_31092845_31092893_31093244_31093325_31094589_31094635_31094754_31094823_31096340_31096380_31096636_31096746_31096858_31096991_31097884_31097998_31100634_31100708_31101026_31101131_31101832_31101983_31102242_31102312_31102426_31102528_31102935_31103021_31103316_31103396_31103576_31103732_31103806
H1_mix_00017800	chr12	+	4020	28	NNC	ENSG00000013573.17	novel	3920	27	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	94.645204197786	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGAGTTTTTTATTGA	-12	True	NA	15	True	AATAAA	-16	NA	31073862	31104791	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_31074092_31078177_31078289_31078389_31078538_31083812_31084062_31084582_31084670_31084968_31085127_31087937_31087984_31089043_31089152_31089402_31089491_31089885_31090095_31091718_31091872_31092845_31092893_31093244_31093325_31094589_31094635_31094754_31094823_31096340_31096380_31096636_31096746_31096858_31096991_31097884_31097998_31100634_31100708_31101026_31101131_31101832_31101983_31102242_31102312_31102426_31102528_31102935_31103021_31103316_31103396_31103576_31103732_31103806
H1_mix_00017803	chr12	+	3753	27	FSM	ENSG00000013573.17	ENST00000545668.5	3751	27	-2	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	94.1489519215641	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGAGTTTTTTATTGA	17	True	NA	15	True	AATAAA	-16	NA	31073891	31104791	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_31073970_31078389_31078538_31083812_31084062_31084582_31084670_31084968_31085127_31087937_31087984_31089043_31089152_31089402_31089491_31089885_31090095_31091718_31091872_31092845_31092893_31093244_31093325_31094589_31094635_31094754_31094823_31096340_31096380_31096636_31096746_31096858_31096991_31097884_31097998_31100634_31100708_31101026_31101131_31101832_31101983_31102242_31102312_31102426_31102528_31102935_31103021_31103321_31103396_31103576_31103732_31103806
H1_mix_00017804	chr12	+	3730	26	FSM	ENSG00000013573.17	ENST00000350437.8	3724	26	-6	0	0	0	multi-exon	FALSE	canonical	2	4	junction_20	87.3732224425768	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGAGTTTTTTATTGA	17	True	NA	15	True	AATAAA	-16	NA	31073891	31104791	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_31074092_31078389_31078538_31083812_31084062_31084582_31084670_31084968_31085127_31087937_31087984_31089043_31089152_31089402_31089491_31089885_31090095_31091718_31091872_31092845_31092893_31093244_31093325_31094589_31094635_31094754_31094823_31096340_31096380_31096636_31096746_31096858_31096991_31097884_31097998_31100634_31100708_31101026_31101131_31102242_31102312_31102426_31102528_31102935_31103021_31103316_31103396_31103576_31103732_31103806
H1_mix_00017810	chr12	+	5193	3	FSM	ENSG00000013573.17	ENST00000537136.1	482	3	-3138	-1573	-1331	0	multi-exon	FALSE	canonical	3	412	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGAGTTTTTTATTGA	NA	False	NA	15	True	AATAAA	-16	NA	31099075	31104791	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_31102312_31102426_31102528_31102935
H1_mix_00017815	chr12	+	1198	3	FSM	ENSG00000174718.12	ENST00000541981.5	674	3	2	-526	2	253	multi-exon	FALSE	canonical	3	8	junction_2	61	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCGGGAGGCTGAGGCAGG	135	False	NA	NA	False	AATACA	-44	NA	31959371	31993360	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_31959492_31960776_31960872_31992377
H1_mix_00017816	chr12	+	6273	6	FSM	ENSG00000174718.12	ENST00000312561.9	6234	6	-43	4	2	0	multi-exon	FALSE	canonical	3	130	junction_1	55.9464029227975	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATTTGAAACCTTCACAG	135	False	NA	5	True	AATAAA	-19	NA	31959371	31993103	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_31959492_31960776_31960872_31970188_31970357_31980877_31985958_31987238_31987323_31992377
H1_mix_00017817	chr12	+	965	5	FSM	ENSG00000174718.12	ENST00000535596.5	965	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	97.8749201787669	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGTGATGTGAATGTCAA	22	False	NA	-33	True	NA	NA	NA	31959437	31992941	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_31959492_31960776_31960872_31970188_31970357_31987238_31987323_31992377
H1_mix_00017818	chr12	+	6445	6	NIC	ENSG00000174718.12	novel	391	3	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	87.2811548961172	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATTTGAAACCTTCACAG	6	True	NA	5	True	AATAAA	-19	NA	31959608	31993103	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_31959901_31960776_31960872_31970188_31970357_31980877_31985958_31987238_31987323_31992377
H1_mix_00017819	chr12	+	8556	2	FSM	ENSG00000174718.12	ENST00000543763.1	883	2	-7290	-383	-7290	379	multi-exon	FALSE	canonical	3	278	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGCTGAAATGTCACAG	NA	False	NA	NA	False	NA	NA	NA	31979875	31993486	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_31987323_31992377
H1_mix_00017821	chr12	+	2109	2	FSM	ENSG00000151746.15	ENST00000550207.1	1328	2	-314	-467	-264	0	multi-exon	FALSE	canonical	3	27	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGGAATCTAATTTTTGTG	6238	False	NA	14	True	AATAAA	-28	NA	32106570	32108796	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_32107545_32107661
H1_mix_00017823	chr12	+	5925	7	ISM	ENSG00000151746.15	ENST00000395758.3	3194	10	-367	37199	0	1604	intron_retention	FALSE	canonical	3	57	junction_6	16.3885122367265	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGTCTTGTTTTTATTTG	9	False	NA	11	True	NA	NA	NA	32106884	32340724	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_32107545_32216246_32216460_32293993_32294147_32305696_32306123_32327460_32328556_32334515_32334668_32337498
H1_mix_00017825	chr12	+	9431	10	FSM	ENSG00000151746.15	ENST00000652176.1	9419	10	-12	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	35.8911248013513	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGCTGCCTTTTTATCA	23	True	NA	29	True	AATAAA	-24	NA	32106834	32383633	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_32107545_32216246_32216460_32293993_32294147_32305696_32306123_32327460_32328556_32334515_32334668_32337498_32337817_32338785_32338980_32367669_32367746_32377539
H1_mix_00017826	chr12	+	3159	6	NIC	ENSG00000151746.15	novel	8811	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_5	24.9158584038359	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTAGCTCTTCTGTTATC	9	False	NA	15	True	AATAAA	-22	NA	32106884	32333065	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_32107545_32216246_32216460_32293993_32294147_32305696_32306123_32327460_32328556_32332453
H1_mix_00017827	chr12	+	9077	9	FSM	ENSG00000151746.15	ENST00000548411.5	8811	9	-266	0	0	0	multi-exon	FALSE	canonical	3	18	junction_7	29.4318598630803	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGCTGCCTTTTTATCA	9	False	NA	29	True	AATAAA	-24	NA	32106884	32383633	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_32107545_32216246_32216460_32293993_32294147_32305696_32306123_32327460_32328556_32334515_32334668_32337498_32337707_32367669_32367746_32377539
H1_mix_00017828	chr12	+	527	1	FSM	ENSG00000277342.1	ENST00000619744.1	527	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATTCTTGTTCATATATTT	1746	False	NA	NA	False	AATAAA	-27	NA	32109075	32109602	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_32109100_32109600
H1_mix_00017829	chr12	+	1907	1	FSM	ENSG00000151746.15	ENST00000614004.1	529	1	-1369	-9	-1369	9	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTTATTTTCTTTTGT	NA	False	NA	18	True	AATAAA	-27	NA	32366164	32368071	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_32366200_32368100
H1_mix_00017831	chr12	+	2928	17	FSM	ENSG00000139132.16	ENST00000583694.2	2931	17	3	0	2	0	multi-exon	FALSE	canonical	0	0	junction_1	21.9764611288988	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGGAGCATTTTTTGA	18	True	NA	NA	False	GATAAA	-17	NA	32502162	32640739	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_32502339_32564136_32564290_32576265_32576450_32581959_32582468_32598496_32598587_32601277_32601424_32602160_32602318_32607956_32608096_32610775_32610835_32611136_32611284_32619697_32619871_32624421_32624453_32624975_32625069_32625653_32625780_32633548_32633690_32638654_32638796_32640275
H1_mix_00017832	chr12	+	4424	19	FSM	ENSG00000087470.19	ENST00000452533.6	4439	19	15	0	15	0	multi-exon	FALSE	canonical	3	183	junction_14	55.4817287241685	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTGTCAAAAAATGAATTC	NA	False	NA	NA	False	AATAAA	-26	NA	32679214	32745552	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_32679466_32701414_32701563_32707366_32707414_32708152_32708225_32710928_32711016_32713208_32713372_32718642_32718764_32720663_32720796_32722426_32722634_32731013_32731135_32731355_32731512_32731853_32731944_32733714_32733808_32737104_32737162_32738263_32738297_32740063_32740241_32740408_32740519_32742588_32742749_32743353
H1_mix_00017833	chr12	+	2498	19	FSM	ENSG00000087470.19	ENST00000547312.5	2393	19	-105	0	15	0	multi-exon	FALSE	canonical	3	16	junction_15	96.6620688561731	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAATCCAAATAATAAATGG	NA	False	NA	-23	True	TATAAA	-40	NA	32679214	32743581	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_32679466_32701414_32701563_32707366_32707414_32708152_32708225_32710928_32711016_32713208_32713372_32718642_32718764_32720663_32720796_32722426_32722634_32731013_32731135_32731355_32731512_32731853_32731944_32733714_32733808_32737104_32737162_32737864_32737943_32740063_32740241_32740408_32740519_32742588_32742749_32743353
H1_mix_00017835	chr12	+	4514	20	FSM	ENSG00000087470.19	ENST00000549701.6	4514	20	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_14	66.5023691078213	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACGAAAAATTTTACGACTT	1	True	NA	NA	False	NA	NA	NA	32679300	32745650	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_32679466_32701414_32701563_32707366_32707414_32708152_32708225_32710928_32711016_32713208_32713372_32718642_32718764_32720663_32720796_32722426_32722634_32731013_32731135_32731355_32731512_32731853_32731944_32733714_32733808_32737104_32737162_32737864_32737943_32738263_32738297_32740063_32740241_32740408_32740519_32742588_32742749_32743353
H1_mix_00017837	chr12	+	635	1	FSM	ENSG00000286950.1	ENST00000666291.1	954	1	-154	473	-154	-473	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTACGGAGCTTGCGCT	NA	False	NA	NA	False	NA	NA	NA	32755355	32755990	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_32755400_32756000
H1_mix_00017842	chr12	+	1644	1	FSM	ENSG00000257674.1	ENST00000550858.1	1650	1	8	-2	8	2	mono-exon	FALSE	NA	NA	NA	NA	NA	462	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCCCACAGGCACAAGCAAA	NA	False	NA	NA	False	NA	NA	NA	42286918	42288562	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_42286900_42288600
H1_mix_00017845	chr12	+	1878	10	FSM	ENSG00000134283.18	ENST00000358314.12	1859	10	-19	0	-1	0	multi-exon	FALSE	canonical	3	122	junction_5	130.373821503143	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAAGTTTCGGACTGT	-16	True	NA	NA	False	AATAAA	-34	NA	42326147	42442181	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_42326230_42335882_42335975_42351884_42352050_42355160_42355223_42374862_42375075_42384939_42384997_42387455_42387536_42393569_42393690_42398853_42398995_42441314
H1_mix_00017846	chr12	+	1864	10	FSM	ENSG00000134283.18	ENST00000613154.4	1863	10	-1	0	-1	0	multi-exon	FALSE	canonical	3	57	junction_2	153.485994857133	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAAGTTTCGGACTGT	-16	True	NA	NA	False	AATAAA	-34	NA	42326147	42442181	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_42326230_42332659_42332703_42335882_42335975_42351884_42352050_42355160_42355223_42374862_42375075_42387455_42387536_42393569_42393690_42398853_42398995_42441314
H1_mix_00017847	chr12	+	1829	9	ISM	ENSG00000134283.18	ENST00000337898.10	1465	11	3	3149	-1	116	5prime_fragment	FALSE	canonical	3	122	junction_4	147.406697185033	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGGCAGCTAATTCTCTT	-16	True	NA	NA	False	AATAAA	-3	NA	42326147	42442297	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_42326230_42335882_42335975_42355160_42355223_42374862_42375075_42384939_42384997_42387455_42387536_42393569_42393690_42398853_42398995_42441314
H1_mix_00017848	chr12	+	3541	13	NIC	ENSG00000134283.18	novel	2170	13	NA	NA	-1	-4	combination_of_known_junctions	FALSE	canonical	3	47	junction_11	161.961072140465	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTAGATTGTCTTTTCT	-7	True	NA	9	True	AATAAA	-11	NA	42326156	42448614	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_42326230_42335882_42335975_42351884_42352050_42355160_42355223_42374862_42375075_42384939_42384997_42387455_42387536_42393569_42393690_42398853_42398995_42441314_42441430_42442640_42442742_42445990_42446291_42446591
H1_mix_00017849	chr12	+	1395	8	NIC	ENSG00000134283.18	novel	1693	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	187	junction_2	93.9611296098074	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTAGAGAATATTTGCTT	14	True	NA	24	True	AATAAA	-15	NA	42326177	42441950	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_42326230_42335882_42335975_42355160_42355223_42374862_42375075_42387455_42387536_42393569_42393690_42398853_42398995_42441314
H1_mix_00017850	chr12	+	3377	12	FSM	ENSG00000134283.18	ENST00000432191.6	3377	12	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_10	169.930710235059	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATTGTCTTTTCTCTTA	14	True	NA	13	True	AATAAA	-15	NA	42326177	42448618	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_42326230_42335882_42335975_42355160_42355223_42374862_42375075_42384939_42384997_42387455_42387536_42393569_42393690_42398853_42398995_42441314_42441430_42442640_42442742_42445972_42446291_42446591
H1_mix_00017851	chr12	+	3482	12	NIC	ENSG00000134283.18	novel	2170	13	NA	NA	3	-11	combination_of_known_junctions	FALSE	canonical	3	47	junction_10	153.711923323797	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACATTTAAGTAGATTGT	-12	True	NA	2	True	AATAAA	-4	NA	42326151	42448607	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_42326230_42335882_42335975_42351884_42352050_42355160_42355223_42374862_42375075_42387455_42387536_42393569_42393690_42398853_42398995_42441314_42441430_42442640_42442742_42445990_42446291_42446591
H1_mix_00017853	chr12	+	5975	1	FSM	ENSG00000134283.18	ENST00000624028.1	5975	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTTTCTCTTATTTTA	109	False	NA	18	True	AATAAA	-20	NA	42442648	42448623	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_42442600_42448600
H1_mix_00017855	chr12	+	2775	8	FSM	ENSG00000139173.10	ENST00000266534.8	2775	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	2.87139303460597	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTATGTGATGTAGTTT	2	True	NA	4	True	AATAAA	-17	NA	43836080	44389758	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_43836197_43844623_43844929_43944209_43944343_44143524_44143625_44211289_44211388_44299579_44299740_44376594_44376725_44388025
H1_mix_00017856	chr12	+	6008	20	FSM	ENSG00000177119.17	ENST00000320560.13	5998	20	-10	0	0	0	multi-exon	FALSE	canonical	2	27	junction_19	79.0322000368159	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTATGGTCTATTCTATAT	-7	True	NA	24	True	AATAAA	-18	NA	45216084	45432349	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_45216392_45302013_45302094_45331294_45331424_45347021_45347088_45348027_45348316_45348517_45348632_45350658_45350775_45357289_45357425_45367687_45367794_45378052_45378114_45388160_45388304_45390420_45390499_45401794_45402021_45403071_45403242_45403438_45403537_45409356_45409488_45416698_45416905_45421070_45421274_45422956_45423063_45429104
H1_mix_00017860	chr12	+	4356	8	FSM	ENSG00000189079.17	ENST00000457135.1	4356	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	53.2123201938063	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGGATAAGTGACTTC	NA	False	NA	19	True	AATAAA	-20	NA	45852294	45908040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_45852897_45860800_45860950_45891779_45891919_45892010_45892097_45893419_45893544_45893629_45893722_45904341_45904399_45904933
H1_mix_00017861	chr12	+	683	3	Antisense	novelGene_ENSG00000111371.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_2	1.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAGTTACAAGTTAATT	1807	False	NA	NA	False	ATTAAA	-15	NA	46269062	46279201	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr12_+_46269159_46275200_46275376_46278789
H1_mix_00017865	chr12	+	3708	1	FSM	ENSG00000275481.1	ENST00000621248.1	3271	1	-438	1	-438	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTTGTGTTGTTTTGTTC	531	False	NA	NA	False	AATATA	-30	NA	46388417	46392125	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_46388400_46392100
H1_mix_00017872	chr12	+	1431	8	FSM	ENSG00000134291.12	ENST00000256686.10	1394	8	-37	0	-22	0	multi-exon	FALSE	canonical	3	133	junction_5	68.5103894996062	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGAAAAATAAACCCTGCT	NA	False	NA	-22	True	NA	NA	NA	47963546	47968849	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_47963634_47964208_47964424_47965281_47965346_47965837_47965998_47966088_47966173_47966682_47966733_47967207_47967262_47968132
H1_mix_00017873	chr12	+	1515	8	FSM	ENSG00000134291.12	ENST00000552561.5	810	8	-56	-649	-20	0	multi-exon	FALSE	canonical	3	141	junction_5	66.6844534095513	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCTCCTCTGATTGC	NA	False	NA	7	True	AATAAA	-17	NA	47963548	47968878	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_47963634_47964208_47964424_47965281_47965346_47965837_47965998_47966088_47966230_47966682_47966733_47967207_47967262_47968132
H1_mix_00017874	chr12	+	1645	8	FSM	ENSG00000134291.12	ENST00000429772.7	1539	8	-12	-94	0	94	multi-exon	FALSE	canonical	3	83	junction_1	82.4697842007753	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAGACTGCACCCTGAT	-2	True	NA	101	True	NA	NA	NA	47963583	47968972	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_47963705_47964208_47964424_47965281_47965346_47965837_47965998_47966088_47966230_47966682_47966733_47967207_47967262_47968132
H1_mix_00017875	chr12	+	1414	8	FSM	ENSG00000134291.12	ENST00000449758.6	1414	8	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	83.8246469039472	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGAAAAATAAACCCTGCT	4	True	NA	-22	True	NA	NA	NA	47963634	47968849	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_47963705_47964208_47964424_47965281_47965346_47965837_47965998_47966088_47966173_47966682_47966733_47967207_47967262_47968132
H1_mix_00017878	chr12	+	3091	22	FSM	ENSG00000152556.17	ENST00000546964.5	3063	22	-44	16	-28	0	multi-exon	FALSE	canonical	0	0	junction_1	124.962325388254	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTGGTCACTGTGCTTT	-1	True	NA	-7	True	AATAAA	-3	NA	48119298	48146088	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_48119407_48122766_48122860_48130362_48130437_48131315_48131394_48132867_48133058_48133314_48133481_48134231_48134277_48134720_48134830_48134942_48135384_48137720_48137847_48139284_48139350_48139848_48139913_48140721_48140872_48141310_48141382_48141739_48141828_48141913_48142067_48142781_48142947_48143752_48143815_48144045_48144158_48145030_48145131_48145209_48145316_48145563
H1_mix_00017880	chr12	+	2867	23	FSM	ENSG00000152556.17	ENST00000551339.6	2867	23	0	0	0	0	multi-exon	FALSE	canonical	2	103	junction_1	104.875526377977	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTGGTCACTGTGCTTT	-22	True	NA	-7	True	AATAAA	-3	NA	48119326	48146088	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_48119463_48122766_48122860_48130362_48130437_48131315_48131394_48132867_48133058_48133314_48133481_48134231_48134277_48134720_48134830_48134942_48135039_48135290_48135384_48137720_48137847_48139284_48139350_48139848_48139913_48140721_48140872_48141310_48141382_48141739_48141828_48141913_48142067_48142781_48142947_48143752_48143815_48144045_48144158_48145030_48145131_48145209_48145316_48145563
H1_mix_00017881	chr12	+	3106	23	FSM	ENSG00000152556.17	ENST00000359794.11	3090	23	-16	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	123.072150108103	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGCATTTCATCATTGAA	-1	True	NA	4	True	AATAAA	-15	NA	48119347	48146404	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_48119407_48122766_48122860_48130362_48130437_48131315_48131394_48132867_48133058_48133314_48133481_48134231_48134277_48134720_48134830_48134942_48135039_48135290_48135384_48137720_48137847_48139284_48139350_48139848_48139913_48140721_48140872_48141310_48141382_48141739_48141828_48141913_48142067_48142781_48142947_48143752_48143815_48144045_48144158_48145030_48145131_48145209_48145316_48145563
H1_mix_00017885	chr12	+	1773	1	FSM	ENSG00000269514.3	ENST00000595310.1	3645	1	-25	1897	5	-1897	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGCTCTTAAAAACTTCC	2	True	NA	NA	False	NA	NA	NA	48198361	48200134	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_48198400_48200100
H1_mix_00017886	chr12	+	465	3	FSM	ENSG00000257660.5	ENST00000549864.1	473	3	2	6	2	-6	multi-exon	FALSE	canonical	2	3	junction_1	2.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTACAGGGTTTTCAGAA	NA	False	NA	3	True	AATAAA	-17	NA	48789577	48790529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_48789691_48789984_48790120_48790312
H1_mix_00017891	chr12	+	2632	2	FSM	ENSG00000167553.17	ENST00000548470.1	1105	2	-43	-1484	-43	50	multi-exon	FALSE	canonical	3	1185	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAGATGGTTCGTACTAA	139	False	NA	73	True	NA	NA	NA	49269742	49274650	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_49269977_49272252
H1_mix_00017893	chr12	+	2983	14	NIC	ENSG00000135451.13	novel	2551	15	NA	NA	-72	0	intron_retention	FALSE	canonical	3	132	junction_11	74.4093109908308	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGTCTGCCCATGGGACT	NA	False	NA	-48	True	NA	NA	NA	49323163	49331670	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_49323350_49323603_49323753_49323844_49324038_49325500_49325659_49325746_49325885_49326075_49326159_49326667_49326721_49327208_49327331_49328926_49329056_49329160_49329245_49329394_49329992_49330144_49330944_49331213_49331408_49331572
H1_mix_00017894	chr12	+	686	4	FSM	ENSG00000135451.13	ENST00000380327.9	675	4	-11	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	156.034896381831	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGTTCCCCATGTCAC	-24	True	NA	28	True	AATAAA	-40	NA	49323243	49324392	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_49323350_49323603_49323753_49323844_49324038_49324154
H1_mix_00017895	chr12	+	642	4	FSM	ENSG00000135451.13	ENST00000548311.5	623	4	-19	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	132.03619032506	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCTCTGTGTTCTCCTA	NA	False	NA	52	True	AATAAA	-45	NA	49323235	49324416	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_49323350_49323603_49323753_49323844_49324038_49324230
H1_mix_00017896	chr12	+	2798	14	FSM	ENSG00000135451.13	ENST00000551245.5	2771	14	-27	0	-19	0	multi-exon	FALSE	canonical	3	127	junction_11	74.8725939542887	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGTCTGCCCATGGGACT	NA	False	NA	-48	True	NA	NA	NA	49323216	49331670	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_49323350_49323603_49323753_49323844_49324038_49325500_49325659_49325746_49325885_49326075_49326159_49326667_49326721_49327208_49327331_49328926_49329056_49329160_49329245_49329394_49329455_49329856_49329992_49330144_49331408_49331572
H1_mix_00017897	chr12	+	2570	15	FSM	ENSG00000135451.13	ENST00000257909.8	2551	15	-19	0	0	0	multi-exon	FALSE	canonical	3	127	junction_11	74.4740743823113	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACGTGTCTAGCTAAGTG	NA	False	NA	13	True	AATAAA	-13	NA	49323235	49331731	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_49323350_49323603_49323753_49323844_49324038_49325500_49325659_49325746_49325885_49326075_49326159_49326667_49326721_49327208_49327331_49328926_49329056_49329160_49329245_49329394_49329455_49329856_49329992_49330144_49330944_49331213_49331408_49331572
H1_mix_00017898	chr12	+	3226	13	NIC	ENSG00000135451.13	novel	2551	15	NA	NA	-3	0	intron_retention	FALSE	canonical	3	132	junction_11	74.3514551901231	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACGTGTCTAGCTAAGTG	-16	True	NA	13	True	AATAAA	-13	NA	49323251	49331731	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_49323350_49323603_49323753_49323844_49324038_49325500_49325659_49325746_49325885_49326075_49326159_49326667_49326721_49327208_49327331_49328926_49329056_49329160_49329245_49329394_49329992_49330144_49331408_49331572
H1_mix_00017901	chr12	+	2698	14	ISM	ENSG00000135451.13	ENST00000257909.8	2551	15	18	0	0	0	intron_retention	FALSE	canonical	3	127	junction_11	75.5596085079179	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACGTGTCTAGCTAAGTG	5	True	NA	13	True	AATAAA	-13	NA	49323272	49331731	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_49323350_49323603_49323753_49323844_49324038_49325500_49325659_49325746_49325885_49326075_49326159_49326667_49326721_49327208_49327331_49328926_49329056_49329160_49329245_49329394_49329455_49329856_49329992_49330144_49330944_49331213
H1_mix_00017902	chr12	+	2425	16	NIC	ENSG00000135451.13	novel	2551	15	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_13	84.6212476601211	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACGTGTCTAGCTAAGTG	26	True	NA	13	True	AATAAA	-13	NA	49323293	49331731	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_49323350_49323603_49323753_49323844_49324038_49325500_49325659_49325746_49325885_49326075_49326159_49326667_49326721_49327208_49327331_49328926_49329056_49329160_49329245_49329394_49329455_49329856_49329992_49330144_49330574_49330660_49330944_49331213_49331408_49331572
H1_mix_00017904	chr12	+	1676	10	FSM	ENSG00000135451.13	ENST00000547923.1	1652	10	-24	0	-24	0	multi-exon	FALSE	canonical	3	21	junction_7	61.8800113321672	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTCAATAAAGTTTCTAAA	1871	False	NA	-10	True	NA	NA	NA	49326616	49331708	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_49326721_49327208_49327331_49328926_49329056_49329160_49329245_49329394_49329455_49329856_49329992_49330144_49330574_49330660_49330944_49331213_49331408_49331572
H1_mix_00017906	chr12	+	3818	14	FSM	ENSG00000123352.18	ENST00000552918.6	3240	14	-584	6	22	0	multi-exon	FALSE	canonical	3	127	junction_2	44.1612162168512	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCACTTTTGTTTCATAG	27	False	NA	12	True	AATAAA	-21	NA	49366877	49527419	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_49367588_49371227_49371291_49460769_49461038_49484589_49484670_49489464_49489574_49490681_49490732_49494740_49495003_49496832_49497010_49500069_49500206_49514554_49514614_49519072_49519183_49522750_49522854_49524681_49524897_49525943
H1_mix_00017912	chr12	+	4397	25	FSM	ENSG00000110844.14	ENST00000380281.5	3154	25	-1243	0	-1243	0	multi-exon	FALSE	canonical	3	38	junction_20	24.2451312409087	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGACTCTTTTCCATGT	5740	False	NA	10	True	TTTAAA	-21	NA	49629300	49644666	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_49630626_49631400_49631545_49631859_49631926_49632595_49632624_49632854_49632881_49633013_49633125_49633426_49633548_49633636_49633662_49633885_49634093_49634331_49634456_49634537_49634603_49635098_49635264_49635364_49635474_49635842_49635994_49636715_49636850_49637469_49637585_49637732_49637825_49641907_49642025_49642234_49642373_49642579_49642676_49642926_49643017_49643222_49643398_49643690_49643753_49643860_49644005_49644099
H1_mix_00017922	chr12	+	560	2	FSM	ENSG00000110881.12	ENST00000548350.1	560	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTTGCAACCTGACCCG	4748	False	NA	NA	False	NA	NA	NA	50078461	50079942	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_50078981_50079901
H1_mix_00017924	chr12	+	3254	12	FSM	ENSG00000066117.15	ENST00000381513.8	3237	12	-17	0	-17	0	multi-exon	FALSE	canonical	3	52	junction_10	127.907701743442	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGGTCCTCCTACCTAC	2778	False	NA	13	True	AATAAA	-14	NA	50085182	50100642	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_50085547_50086160_50086349_50086620_50086664_50086755_50086879_50087362_50087486_50088520_50088638_50089883_50089986_50090240_50090403_50090492_50090591_50094436_50094573_50098713_50098816_50098946
H1_mix_00017925	chr12	+	3300	13	FSM	ENSG00000066117.15	ENST00000394963.9	3283	13	-17	0	0	0	multi-exon	FALSE	canonical	3	392	junction_4	49.4449750283642	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACGCTTGTAGTGTTTGT	3	True	NA	78	True	NA	NA	NA	50085324	50100707	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_50085547_50086160_50086349_50086620_50086664_50086755_50086879_50087362_50087486_50088520_50088638_50089883_50089986_50090240_50090403_50090492_50090591_50094436_50094573_50096849_50096973_50098713_50098816_50098946
H1_mix_00017927	chr12	+	932	2	FSM	ENSG00000178449.9	ENST00000548985.1	677	2	-255	0	-100	0	multi-exon	FALSE	canonical	3	85	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTCTTGGTGTTTTTT	142	False	NA	13	True	ATTAAA	-13	NA	50111981	50120451	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_50112498_50120035
H1_mix_00017928	chr12	+	484	2	FSM	ENSG00000178449.9	ENST00000550487.6	484	2	0	0	0	0	multi-exon	FALSE	canonical	3	525	junction_1	0	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTTGGTGTTTTTTGT	20	True	NA	15	True	ATTAAA	-15	NA	50112235	50120453	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_50112302_50120035
H1_mix_00017931	chr12	+	801	7	FSM	ENSG00000161813.23	ENST00000548993.5	790	7	-11	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	195.209289396449	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGCGTTGTATTGTAATT	-6	True	NA	NA	False	NA	NA	NA	50400884	50437785	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_50401029_50416345_50416435_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734
H1_mix_00017932	chr12	+	6464	16	FSM	ENSG00000161813.23	ENST00000398473.7	6441	16	-23	0	5	0	multi-exon	TRUE	canonical	3	233	junction_1	61.4160312043109	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTGGTTTCCTTTTCTCT	-29	True	NA	9	True	AATAAA	-15	NA	50400861	50480004	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_50401029_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50461134_50461348_50462581_50462631_50466958_50467121_50473414_50473537_50473998_50474168_50475525
H1_mix_00017935	chr12	+	6521	18	NIC	ENSG00000161813.23	novel	6441	16	NA	NA	1	-88	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	131.205826311683	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGTACATCCTTGTATTT	6	True	NA	12	True	CATAAA	-9	NA	50400896	50479908	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_50401029_50402674_50402814_50412404_50412454_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50461134_50461348_50462581_50462631_50466958_50467121_50473414_50473537_50473998_50474168_50475525
H1_mix_00017936	chr12	+	1360	10	NIC	ENSG00000161813.23	novel	1577	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_3	142.636289600898	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGTTGGTTGCTTTTTA	18	True	NA	6	True	AATAAA	-17	NA	50400908	50461487	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_50401029_50427761_50427910_50428934_50429091_50430497_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50454313_50454418_50461134
H1_mix_00017942	chr12	+	6238	16	NNC	ENSG00000161813.23	novel	2068	10	NA	NA	247	-88	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_3	114.15147830843	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGTACATCCTTGTATTT	14	False	NA	12	True	CATAAA	-9	NA	50401439	50479908	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_50401480_50427761_50427910_50428934_50429091_50430497_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50461134_50461348_50462581_50462631_50466958_50467121_50473414_50473537_50473998_50474168_50475525
H1_mix_00017946	chr12	+	8474	37	NNC	ENSG00000066084.13	novel	8705	38	NA	NA	21	0	at_least_one_novel_splicesite	TRUE	canonical	2	2	junction_4	18.5980883127511	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTTAATCCTTCACAC	3	True	NA	14	True	AATAAA	-14	NA	50505005	50748657	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_50505241_50625975_50626048_50640723_50640853_50660193_50660320_50674473_50674630_50675328_50675452_50678678_50678877_50680671_50680764_50683137_50683249_50685832_50685957_50686572_50686683_50691048_50691152_50692948_50693014_50695266_50695361_50695847_50695968_50697060_50697176_50698327_50698468_50699065_50699203_50704139_50704221_50706537_50706666_50708447_50708563_50714394_50714597_50718708_50718819_50718954_50719036_50721272_50721397_50723201_50723324_50724774_50724887_50727702_50727813_50728547_50728679_50731368_50731538_50732365_50732537_50734134_50734197_50735072_50735131_50737035_50737111_50739408_50739587_50741415_50741540_50744586
H1_mix_00017947	chr12	+	1153	8	NIC	ENSG00000066084.13	novel	8705	38	NA	NA	140	625	combination_of_known_splicesites	FALSE	canonical	2	2	junction_4	31.4025866606493	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCAGGTTAGCCCAATGCCA	13	False	NA	NA	False	AATAAA	-17	NA	50505124	50680907	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_50505241_50625975_50626048_50640723_50640853_50660193_50660320_50674473_50674630_50675328_50675449_50678678_50678877_50680671
H1_mix_00017948	chr12	+	2435	7	FSM	ENSG00000123268.9	ENST00000262053.8	2412	7	-23	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	14.0356688476182	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGCTCCTGGCCATGCTG	-4	True	NA	43	True	AATATA	-23	NA	50764077	50821162	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_50764308_50780139_50780239_50795908_50796010_50809455_50809590_50814009_50814193_50814279_50814440_50819634
H1_mix_00017951	chr12	+	2009	8	FSM	ENSG00000050426.16	ENST00000547318.5	2001	8	-8	0	-8	0	multi-exon	FALSE	canonical	3	17	junction_2	22.6643656295021	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGATGGAAATGACTTAT	NA	False	NA	13	True	AGTAAA	-15	NA	51048292	51060409	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_51048479_51049033_51049186_51053777_51053861_51055834_51056022_51056143_51056246_51056349_51056503_51058031_51058129_51059360
H1_mix_00017954	chr12	+	1583	5	FSM	ENSG00000050426.16	ENST00000380135.7	1566	5	-17	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	40.1707293934277	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGAAGCACTGTTTTTA	-6	True	NA	-33	True	NA	NA	NA	51048326	51060363	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_51048479_51049033_51049186_51056349_51056503_51058005_51058129_51059360
H1_mix_00017955	chr12	+	2542	7	NIC	ENSG00000050426.16	novel	2106	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	17	junction_1	24.4795833297873	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTATGCATACTCTAAT	-6	True	NA	25	True	AGTAAA	-27	NA	51048326	51060421	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_51049186_51053777_51053861_51055834_51056022_51056143_51056246_51056349_51056503_51058031_51058129_51059360
H1_mix_00017956	chr12	+	2120	9	FSM	ENSG00000050426.16	ENST00000262055.9	2106	9	-14	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	21.8116941111872	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATGCATACTCTAATCAT	NA	False	NA	28	True	AGTAAA	-30	NA	51048312	51060424	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_51048479_51049033_51049186_51052091_51052208_51053777_51053861_51055834_51056022_51056143_51056246_51056349_51056503_51058031_51058129_51059360
H1_mix_00017961	chr12	+	2064	4	FSM	ENSG00000183283.16	ENST00000412716.8	2064	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	147.121265174912	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTGATCATTTCATGAAT	-1	True	NA	11	True	AATAAA	-20	NA	51238825	51243933	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_51238921_51240342_51240462_51240870_51241117_51242329
H1_mix_00017962	chr12	+	1179	4	FSM	ENSG00000183283.16	ENST00000425012.6	1117	4	-62	0	40	0	multi-exon	FALSE	canonical	0	0	junction_1	154.379042907024	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCCCTTGGAGTTGGCT	NA	False	NA	NA	False	NA	NA	NA	51238763	51246717	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_51238921_51240342_51240462_51240870_51241117_51246060
H1_mix_00017964	chr12	+	11774	25	FSM	ENSG00000050438.17	ENST00000453097.7	11764	25	-10	0	-10	0	multi-exon	FALSE	canonical	3	9	junction_24	26.3690422444367	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACCTGTGGTGTTCTTTG	-20	True	NA	4	True	AATAAA	-17	NA	51424820	51515763	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_51425036_51440707_51440790_51450875_51451023_51452123_51452260_51453538_51453700_51457350_51457540_51458558_51458651_51459950_51460109_51461203_51461292_51462309_51462457_51463613_51463715_51469613_51469789_51470391_51470526_51471286_51471533_51474341_51474448_51475044_51475207_51485786_51485901_51488698_51488861_51489699_51489952_51493703_51493773_51494944_51495119_51496986_51497125_51504028_51504121_51505834_51505931_51507425
H1_mix_00017965	chr12	+	2306	15	ISM	ENSG00000050438.17	ENST00000319957.10	3834	22	-151	23285	-9	2	5prime_fragment	FALSE	canonical	3	59	junction_11	8.09289181684666	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTACTCACTTTCTTTTA	-19	True	NA	3	True	AATAAA	-17	NA	51424821	51474577	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_51425036_51440707_51440790_51450875_51451023_51452123_51452260_51453538_51453700_51457350_51457540_51458558_51458651_51459950_51460109_51461203_51461292_51462309_51462457_51463613_51463715_51469613_51469789_51470391_51470526_51471286_51471533_51474341
H1_mix_00017966	chr12	+	3834	22	FSM	ENSG00000050438.17	ENST00000319957.10	3834	22	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_17	24.9353813411864	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACAAAAAAAAAAAGAAAAGA	1	True	NA	NA	False	AATATA	-17	NA	51424972	51497862	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_51425036_51440707_51440790_51450875_51451023_51452123_51452260_51453538_51453700_51457350_51457540_51458558_51458651_51459950_51460109_51461203_51461292_51462309_51462457_51463613_51463715_51469613_51469789_51470391_51470526_51471286_51471533_51474341_51474448_51475044_51475207_51485786_51485901_51488698_51488861_51489699_51489952_51493703_51493773_51494944_51495119_51496986
H1_mix_00017968	chr12	+	11447	26	FSM	ENSG00000196876.18	ENST00000545061.5	11433	26	-14	0	-2	0	multi-exon	FALSE	canonical	0	0	junction_3	6.19599870884428	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGACTGGCCTGTCAT	-14	True	NA	20	True	AATAAA	-30	NA	51591221	51812864	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_51591360_51662763_51663094_51684173_51684293_51686367_51686458_51687090_51687220_51688757_51688850_51699569_51699792_51701143_51701208_51702772_51702915_51705416_51705624_51706421_51706716_51721545_51721909_51745902_51746036_51751354_51751594_51762502_51762677_51765670_51766028_51768864_51769336_51769867_51769986_51770528_51770684_51774188_51774363_51786541_51786827_51788694_51788749_51789280_51789419_51790397_51790503_51794370_51794642_51806281
H1_mix_00017976	chr12	+	2796	8	NIC	ENSG00000123358.20	novel	2029	7	NA	NA	-51	0	intron_retention	FALSE	canonical	3	54	junction_2	25.2101372548458	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGATTCAGTCTGTCTCT	-14	True	NA	10	True	AATAAA	-21	NA	52037125	52059503	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_52037444_52041809_52041930_52054326_52055205_52056029_52056160_52056493_52056646_52057056_52057260_52057351_52057531_52058687
H1_mix_00017978	chr12	+	521	4	FSM	ENSG00000123358.20	ENST00000553200.1	521	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	45.9879211194514	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCACTGGGCCTGGTGATG	-18	True	NA	NA	False	NA	NA	NA	52037241	52045568	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_52037444_52041809_52041930_52043801_52043912_52045479
H1_mix_00017979	chr12	+	2882	9	NIC	ENSG00000123358.20	novel	2029	7	NA	NA	-27	0	intron_retention	FALSE	canonical	3	17	junction_3	42.5776863509515	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGATTCAGTCTGTCTCT	10	True	NA	10	True	AATAAA	-21	NA	52037149	52059503	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_52037444_52041809_52041930_52043801_52043912_52054326_52055205_52056029_52056160_52056493_52056646_52057056_52057260_52057351_52057531_52058687
H1_mix_00017980	chr12	+	2637	8	FSM	ENSG00000123358.20	ENST00000545748.5	3511	8	874	0	874	0	multi-exon	FALSE	canonical	2	12	junction_1	40.0667809884387	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGAGATTCAGTCTGTCT	1243	False	NA	8	True	AATAAA	-19	NA	52038588	52059501	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_52038750_52041809_52041930_52054326_52055205_52056029_52056160_52056493_52056646_52057056_52057260_52057351_52057531_52058687
H1_mix_00017981	chr12	+	1820	2	FSM	ENSG00000123358.20	ENST00000478250.1	1820	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCCCTAAGTTCCCCCCT	13	False	NA	NA	False	NA	NA	NA	52043726	52055961	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_52043912_52054326
H1_mix_00017987	chr12	+	1413	7	FSM	ENSG00000111057.11	ENST00000388835.4	1413	7	0	0	0	0	multi-exon	FALSE	canonical	1	2012	junction_3	1748.34376387101	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCACTTTGTCTTCTTTTG	-1	True	NA	20	True	AATAAA	-20	NA	52949117	52952906	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_52949591_52950327_52950411_52950749_52950907_52951480_52951646_52951730_52951857_52952118_52952343_52952721
H1_mix_00017991	chr12	+	1936	15	FSM	ENSG00000063046.18	ENST00000420463.7	1936	15	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_10	366.317728988686	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCAAAACCTCTATCCAG	16	True	NA	-90	True	NA	NA	NA	53006455	53040280	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53006497_53016472_53016611_53018797_53019007_53019909_53020027_53021805_53021861_53022492_53022628_53027781_53027920_53028014_53028189_53033805_53034035_53034611_53034725_53037408_53037623_53038355_53038412_53039237_53039344_53039629_53039703_53040142
H1_mix_00018003	chr12	+	803	1	FSM	ENSG00000283536.2	ENST00000635789.1	835	1	31	1	31	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCAAGTTGTCATTTCT	19	False	NA	NA	False	NA	NA	NA	53241919	53242722	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53241900_53242700
H1_mix_00018005	chr12	+	1765	2	FSM	ENSG00000182544.9	ENST00000329548.5	1763	2	-3	1	-3	0	multi-exon	FALSE	canonical	3	212	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGATTTGATTTACTCATC	-8	True	NA	14	True	AATAAA	-16	NA	53252091	53254405	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53252269_53252817
H1_mix_00018006	chr12	+	6644	31	NIC	ENSG00000135476.12	novel	6618	31	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	46.6791530914319	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCTGTTTTGCGTAGTT	-7	True	NA	13	True	AATAAA	-13	NA	53268298	53293635	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_53268407_53268754_53268848_53269023_53270086_53270377_53270483_53270677_53270799_53272720_53272858_53274816_53275011_53276619_53276860_53277082_53277228_53277469_53277609_53277820_53277961_53279731_53279867_53281506_53281627_53282263_53282436_53283128_53283258_53283381_53283539_53284057_53284168_53285923_53286913_53287971_53288342_53288537_53288700_53289089_53289304_53289403_53289595_53290084_53290213_53290346_53290470_53290840_53290997_53291689_53291861_53291983_53292089_53292277_53292394_53292573_53292658_53292805_53292971_53293272
H1_mix_00018010	chr12	+	6000	25	ISM	ENSG00000135476.12	ENST00000552671.5	6665	31	5502	3	-246	0	3prime_fragment	FALSE	canonical	3	138	junction_11	29.4862255977261	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCTGTTTTGCGTAGTT	5282	False	NA	13	True	AATAAA	-13	NA	53273834	53293635	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_53275011_53276619_53276860_53277082_53277228_53277469_53277609_53277820_53277961_53279731_53279867_53281506_53281627_53282263_53282436_53283128_53283258_53283381_53283539_53284057_53284168_53285923_53286913_53287971_53288342_53288537_53288700_53289089_53289304_53289403_53289595_53290084_53290213_53290346_53290470_53290840_53290997_53291689_53291861_53291983_53292089_53292277_53292394_53292573_53292658_53292805_53292971_53293272
H1_mix_00018011	chr12	+	4078	10	FSM	ENSG00000135476.12	ENST00000549154.1	4078	10	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_3	19.8369900146042	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCTGTTTTGCGTAGTT	7549	False	NA	13	True	AATAAA	-13	NA	53287255	53293635	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53288342_53288537_53289304_53289403_53290470_53290840_53290997_53291689_53291861_53291983_53292089_53292277_53292394_53292573_53292658_53292805_53292971_53293272
H1_mix_00018014	chr12	+	649	6	FSM	ENSG00000123349.15	ENST00000549759.2	635	6	-14	0	0	0	multi-exon	FALSE	canonical	2	22	junction_2	1643.95279737589	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTTGGTCTTTTCTTGG	2798	False	NA	28	True	AATAAA	-16	NA	53295491	53299447	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53295640_53295838_53295942_53296429_53296468_53297849_53297925_53298044_53298151_53299268
H1_mix_00018015	chr12	+	2375	11	FSM	ENSG00000288663.1	ENST00000677982.1	2360	11	-15	0	0	0	multi-exon	FALSE	canonical	3	368	junction_5	1482.18600722042	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTCCATCTCATACTGAC	2798	False	NA	0	True	AATAAA	-1	NA	53295491	53307158	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53295640_53295838_53296276_53297849_53297925_53298044_53298151_53299268_53299954_53300149_53300263_53303033_53303194_53305907_53306061_53306197_53306321_53306679_53306862_53306965
H1_mix_00018016	chr12	+	2565	3	FSM	ENSG00000123349.15	ENST00000678256.1	2565	3	0	0	0	0	multi-exon	FALSE	canonical	3	3256	junction_1	38.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTTGTGTTTTAATGCC	2831	False	NA	-13	True	NA	NA	NA	53295524	53299406	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53295640_53295838_53298151_53299268
H1_mix_00018017	chr12	+	496	4	FSM	ENSG00000123349.15	ENST00000351500.7	478	4	-18	0	1	0	multi-exon	FALSE	canonical	3	541	junction_1	1369.65275404632	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTCTTTTCTTGGATT	2813	False	NA	31	True	AATAAA	-19	NA	53295506	53299450	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53295640_53297849_53297925_53298044_53298151_53299268
H1_mix_00018018	chr12	+	581	5	FSM	ENSG00000123349.15	ENST00000243040.10	564	5	-17	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	1439.8522493645	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTCTTTTCTTGGATT	2831	False	NA	31	True	AATAAA	-19	NA	53295524	53299450	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53295640_53295838_53295942_53297849_53297925_53298044_53298151_53299268
H1_mix_00018019	chr12	+	576	5	FSM	ENSG00000123349.15	ENST00000547130.6	559	5	-17	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	1696.40045390232	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTCTTTTCTTGGATT	2831	False	NA	31	True	AATAAA	-19	NA	53295524	53299450	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53295640_53296453_53296552_53297849_53297925_53298044_53298151_53299268
H1_mix_00018020	chr12	+	658	6	FSM	ENSG00000123349.15	ENST00000676468.1	640	6	-18	0	1	0	multi-exon	FALSE	canonical	3	13	junction_2	1372.78948131168	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTCTTTTCTTGGATTAA	2813	False	NA	33	True	AATAAA	-21	NA	53295506	53299452	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53295640_53295838_53295942_53296218_53296276_53297849_53297925_53298044_53298151_53299268
H1_mix_00018021	chr12	+	2058	12	FSM	ENSG00000288663.1	ENST00000676940.1	2040	12	-18	0	0	0	multi-exon	FALSE	canonical	3	368	junction_6	1472.77131808435	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTCCATCTCATACTGAC	2813	False	NA	0	True	AATAAA	-1	NA	53295506	53307158	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53295640_53295838_53295942_53296243_53296276_53297849_53297925_53298044_53298151_53299268_53299954_53300149_53300263_53303033_53303194_53305907_53306061_53306197_53306321_53306679_53306862_53306965
H1_mix_00018022	chr12	+	2461	4	FSM	ENSG00000123349.15	ENST00000677712.1	2441	4	-20	0	0	0	multi-exon	FALSE	canonical	3	3256	junction_1	123.566446362541	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCAGCTGGGCAGAATGT	-15	True	NA	14	True	AATAAA	-2	NA	53295535	53299433	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53295640_53295838_53297925_53298044_53298151_53299268
H1_mix_00018025	chr12	+	1392	6	FSM	ENSG00000139637.14	ENST00000548845.5	1369	6	-23	0	0	0	multi-exon	FALSE	canonical	3	403	junction_4	13.0935098426663	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGACCCAGTCCTTGACT	-23	True	NA	13	True	AATAAA	-14	NA	53299694	53307171	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53300263_53303033_53303194_53305907_53306061_53306197_53306321_53306679_53306862_53306965
H1_mix_00018026	chr12	+	1202	7	FSM	ENSG00000139637.14	ENST00000267103.10	1202	7	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_1	22.5788740984921	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCCTTGACTTATTCT	-23	True	NA	19	True	AATAAA	-20	NA	53299694	53307177	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53299954_53300149_53300263_53303033_53303194_53305907_53306061_53306197_53306321_53306679_53306862_53306965
H1_mix_00018027	chr12	+	840	5	FSM	ENSG00000139637.14	ENST00000549488.5	840	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	179.828390417086	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCCTTGACTTATTCT	62	False	NA	19	True	AATAAA	-20	NA	53300092	53307177	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53300263_53305907_53306061_53306197_53306321_53306679_53306862_53306965
H1_mix_00018031	chr12	+	8407	5	ISM	ENSG00000185591.10	ENST00000426431.2	7603	6	170	0	170	0	3prime_fragment	FALSE	canonical	3	135	junction_1	5.43139024560011	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTCTCTGGTGTATTGA	-20	True	NA	NA	False	AATAAA	-4	NA	53380808	53416446	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_53381814_53382109_53383623_53406584_53406754_53409361_53409562_53410926
H1_mix_00018033	chr12	+	886	7	FSM	ENSG00000135409.11	ENST00000550839.1	887	7	0	1	0	-1	multi-exon	FALSE	canonical	2	6	junction_5	14.0435829552939	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAGGCCTAGGCTGTTG	12	True	NA	NA	False	NA	NA	NA	53425115	53430282	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53425165_53425454_53425488_53425688_53425920_53428895_53429011_53429452_53429626_53429830_53429979_53430145
H1_mix_00018034	chr12	+	1035	7	NIC	ENSG00000135409.11	novel	887	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_5	12.6315302143309	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGCAGTTTATGTGTCAT	12	True	NA	-40	True	NA	NA	NA	53425115	53431473	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_53425165_53425454_53425488_53425688_53425920_53428895_53429011_53429452_53429626_53430145_53430283_53431176
H1_mix_00018035	chr12	+	1067	4	FSM	ENSG00000205352.11	ENST00000549924.5	625	4	0	-442	0	0	multi-exon	FALSE	canonical	3	369	junction_1	815.392066568116	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGATGAGCTTTGACTGC	30	False	NA	10	True	NA	NA	NA	53441677	53446536	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53441801_53442694_53442734_53443390_53443774_53446014
H1_mix_00018037	chr12	+	927	4	FSM	ENSG00000205352.11	ENST00000379786.8	927	4	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	816.250097839028	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACCTGTGCTATCACCT	-2	True	NA	36	True	AATAAA	-20	NA	53441761	53446638	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53441793_53442694_53442734_53443540_53443774_53446014
H1_mix_00018038	chr12	+	1009	4	FSM	ENSG00000205352.11	ENST00000551003.5	1009	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	817.168417293658	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTCACCTGTGCTATCAC	-5	True	NA	34	True	AATAAA	-18	NA	53441731	53446636	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53441793_53442694_53442734_53443486_53443774_53446014
H1_mix_00018039	chr12	+	826	4	FSM	ENSG00000205352.11	ENST00000546581.5	810	4	-16	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	821.760846529505	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTATCACCTTGGCTGG	-5	True	NA	43	True	AATAAA	-27	NA	53441731	53446645	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53441793_53442694_53442734_53443678_53443774_53446014
H1_mix_00018041	chr12	+	1730	14	FSM	ENSG00000197111.16	ENST00000359282.9	1730	14	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_1	213.759556345428	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGATTCATGTGGGTTT	-1	True	NA	45	True	ATTAAA	-44	NA	53452101	53479826	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53452377_53454725_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462492_53462568_53465931_53465974_53467220_53467294_53467804_53467844_53468776_53468833_53471637_53471808_53479405
H1_mix_00018042	chr12	+	3026	13	FSM	ENSG00000197111.16	ENST00000437231.5	3026	13	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_10	239.188384612074	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGGAATACGAGTGGCTT	-1	True	NA	3	True	TATAAA	-14	NA	53452101	53481161	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53452377_53454725_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462492_53462568_53465931_53465974_53467220_53467294_53468776_53468833_53471637_53471808_53479405
H1_mix_00018044	chr12	+	1342	15	FSM	ENSG00000197111.16	ENST00000552296.6	1342	15	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_12	229.199683459553	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTCAGCTGTTGATG	265	False	NA	35	True	ATTAAA	-16	NA	53452367	53479614	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53452377_53454725_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462492_53462568_53464759_53464853_53465931_53465974_53467220_53467294_53467804_53467844_53468779_53468833_53471637_53471808_53479405
H1_mix_00018045	chr12	+	2742	12	FSM	ENSG00000197111.16	ENST00000455667.7	2741	12	-1	0	0	0	multi-exon	FALSE	canonical	3	221	junction_9	235.079659436949	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGAATACGAGTGGCTTT	1	True	NA	4	True	TATAAA	-15	NA	53454735	53481162	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462492_53462568_53465931_53465974_53467220_53467294_53468776_53468833_53471637_53471808_53479405
H1_mix_00018046	chr12	+	1786	8	FSM	ENSG00000197111.16	ENST00000553064.6	1786	8	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_7	245.040771284774	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCATTATGCCTCTTTCT	853	False	NA	NA	False	AATAAA	-32	NA	53461014	53476070	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53461144_53462492_53462568_53465931_53465974_53467220_53467294_53467804_53467844_53468776_53468833_53471637_53471808_53474868
H1_mix_00018047	chr12	+	1010	7	NIC	ENSG00000197111.16	novel	1919	8	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	54	junction_3	351.163146636368	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCCACAGTGATTCATGT	854	False	NA	39	True	ATTAAA	-38	NA	53461015	53479820	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_53461144_53462492_53462568_53464759_53464853_53467220_53467294_53468776_53468833_53471637_53471808_53479405
H1_mix_00018048	chr12	+	2395	8	FSM	ENSG00000197111.16	ENST00000547859.2	1919	8	-121	-355	0	0	multi-exon	FALSE	canonical	3	221	junction_5	264.632205299417	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGAATACGAGTGGCTTT	853	False	NA	4	True	TATAAA	-15	NA	53461014	53481162	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53461144_53462492_53462568_53464759_53464853_53465931_53465974_53467220_53467294_53468776_53468833_53471637_53471808_53479405
H1_mix_00018049	chr12	+	1696	3	FSM	ENSG00000197111.16	ENST00000547048.5	1696	3	0	0	0	0	multi-exon	FALSE	canonical	3	857	junction_1	109.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCACAGTGATTCATGTG	1795	False	NA	40	True	ATTAAA	-39	NA	53467722	53479821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53468833_53471637_53471808_53479405
H1_mix_00018051	chr12	+	1519	9	FSM	ENSG00000139546.11	ENST00000266987.7	1510	9	-9	0	0	0	multi-exon	FALSE	canonical	3	296	junction_3	46.0365004643055	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTCTCTTCTGTTTCCT	-40	True	NA	22	True	AATAAA	-24	NA	53501273	53506431	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53501462_53502014_53502185_53503026_53503130_53503712_53503809_53504396_53504470_53504697_53504816_53505134_53505263_53505648_53505851_53505990
H1_mix_00018054	chr12	+	1402	9	FSM	ENSG00000139546.11	ENST00000394357.6	1402	9	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	110.236606329295	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTTGTGGATTTTTAAG	17	True	NA	3	True	AATAAA	-5	NA	53501618	53506412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53501709_53502014_53502185_53503026_53503130_53503712_53503809_53504396_53504470_53504697_53504816_53505134_53505263_53505648_53505851_53505990
H1_mix_00018057	chr12	+	1811	10	FSM	ENSG00000135486.19	ENST00000677375.1	1811	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	4590.32237497246	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTAATTCTCTTGAATGA	NA	False	NA	-3	True	AATAAA	-2	NA	54280662	54285229	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572_54282666_54282799_54282875_54283811_54283968_54284239_54284318_54284548
H1_mix_00018058	chr12	+	2014	10	FSM	ENSG00000135486.19	ENST00000678418.1	2008	10	-6	0	1	0	multi-exon	FALSE	canonical	3	1604	junction_7	5401.87427921042	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCTTGAATGAAATGACAA	NA	False	NA	5	True	AATAAA	-10	NA	54280691	54285237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282666_54282799_54282875_54283078_54283235_54283811_54283968_54284257_54284318_54284548
H1_mix_00018059	chr12	+	1993	8	FSM	ENSG00000135486.19	ENST00000676725.1	1987	8	-6	0	1	0	multi-exon	FALSE	canonical	3	11435	junction_5	1687.06257217952	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCTTGAATGAAATGACAAC	NA	False	NA	6	True	AATAAA	-11	NA	54280691	54285238	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282875_54283811_54283968_54284257_54284318_54284548
H1_mix_00018060	chr12	+	2608	9	FSM	ENSG00000135486.19	ENST00000550482.2	2596	9	-12	0	1	0	multi-exon	FALSE	canonical	3	11435	junction_7	1600.74470462188	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGGAAGTTTGGGGAG	NA	False	NA	135	True	NA	NA	NA	54280691	54285842	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572_54282666_54282799_54282875_54283811_54283968_54284257
H1_mix_00018061	chr12	+	3999	6	FSM	ENSG00000135486.19	ENST00000677385.1	3999	6	0	0	0	0	multi-exon	FALSE	canonical	3	12737	junction_1	1579.1773301311	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGGAAGTTTGGGGAGG	NA	False	NA	136	True	NA	NA	NA	54280662	54285843	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572
H1_mix_00018063	chr12	+	2538	9	FSM	ENSG00000135486.19	ENST00000679228.1	2515	9	-23	0	0	0	multi-exon	FALSE	canonical	3	11435	junction_6	1109.34326715179	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCTTACCTTTGGTGCT	8	True	NA	38	True	NA	NA	NA	54280725	54285745	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_54280823_54281385_54281942_54282089_54282301_54282393_54282487_54282572_54282666_54282799_54282875_54283811_54283968_54284257_54284318_54284548
H1_mix_00018064	chr12	+	3744	11	FSM	ENSG00000135486.19	ENST00000340913.11	3744	11	0	0	0	0	multi-exon	FALSE	canonical	3	1604	junction_8	5148.18032318216	1272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGCTTGTTTTGTCCTC	8	True	NA	41	True	AATAAA	-15	NA	54280725	54287087	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572_54282666_54282799_54282875_54283078_54283235_54283811_54283968_54284257_54284318_54284548
H1_mix_00018065	chr12	+	1256	11	FSM	ENSG00000135486.19	ENST00000547566.5	1234	11	-22	0	0	0	multi-exon	FALSE	canonical	3	211	junction_9	5555.80178642111	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGCTTGTTTTGTCCTCC	8	True	NA	42	True	AATAAA	-16	NA	54280725	54287088	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572_54282666_54282799_54282875_54283811_54283968_54284257_54284318_54286661_54286733_54286952
H1_mix_00018067	chr12	+	2067	10	FSM	ENSG00000135486.19	ENST00000678077.1	2067	10	0	0	0	0	multi-exon	FALSE	canonical	1	50	junction_1	4639.42467165387	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTGAATGAAATGACAACT	37	False	NA	7	True	AATAAA	-12	NA	54280871	54285239	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_54281296_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572_54282666_54282799_54282875_54283811_54283968_54284257_54284318_54284548
H1_mix_00018070	chr12	+	925	2	FSM	ENSG00000135486.19	ENST00000551665.1	925	2	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGTTTTTTTTTTTAATA	3	True	NA	5	True	NA	NA	NA	54285906	54287051	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_54286733_54286952
H1_mix_00018071	chr12	+	888	8	FSM	ENSG00000111481.10	ENST00000455864.6	880	8	-8	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	358.973707183381	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCATCCCAACAGCCCAG	-6	True	NA	51	True	NA	NA	NA	54325130	54350913	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_54325182_54342205_54342288_54343224_54343317_54345459_54345516_54347766_54347845_54347999_54348052_54349619_54349659_54350475
H1_mix_00018072	chr12	+	1890	9	FSM	ENSG00000111481.10	ENST00000262061.7	1890	9	0	0	0	0	multi-exon	FALSE	canonical	3	731	junction_1	171.870409029594	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTTGTGTGATGTTTC	-6	True	NA	14	True	AATAAA	-15	NA	54325130	54351846	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_54325182_54340546_54340616_54342205_54342288_54343224_54343317_54345459_54345516_54347766_54347845_54347999_54348052_54349619_54349659_54350475
H1_mix_00018076	chr12	+	1238	3	FSM	ENSG00000135441.8	ENST00000549147.1	1229	3	-9	0	-9	0	multi-exon	FALSE	canonical	3	845	junction_1	123	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTCCTGGGGGCACTTCA	-27	True	NA	NA	False	NA	NA	NA	55716028	55720087	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_55716197_55716932_55717006_55719090
H1_mix_00018077	chr12	+	837	4	FSM	ENSG00000135441.8	ENST00000547076.5	837	4	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	381.811762812806	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGGTGTGTTTCAGA	67	False	NA	16	True	AATAAA	-16	NA	55716291	55719703	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_55716718_55716932_55717006_55719090_55719224_55719498
H1_mix_00018079	chr12	+	543	3	FSM	ENSG00000135441.8	ENST00000548556.1	525	3	-18	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	490.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGGTGTGTTTCAGA	22	True	NA	16	True	AATAAA	-16	NA	55716512	55719703	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_55716718_55719090_55719224_55719498
H1_mix_00018088	chr12	+	604	4	FSM	ENSG00000182796.15	ENST00000635938.1	593	4	-11	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	27.5358352374178	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTGAGCCCACAGGACCT	-9	True	NA	NA	False	NA	NA	NA	55830827	55835047	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_55831084_55832958_55833015_55833446_55833542_55834850
H1_mix_00018090	chr12	+	2326	4	FSM	ENSG00000182796.15	ENST00000508246.6	2313	4	-13	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	24.5266295188629	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGGGAGTCCAGCCTCT	-9	True	NA	3	True	AATAAA	-17	NA	55830827	55836244	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_55831084_55831256_55831350_55832958_55833542_55834850
H1_mix_00018091	chr12	+	2235	3	FSM	ENSG00000182796.15	ENST00000482378.6	2230	3	-5	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	27	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGAGTCCAGCCTCTGC	-9	True	NA	5	True	AATAAA	-19	NA	55830827	55836246	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_55831084_55832958_55833542_55834850
H1_mix_00018092	chr12	+	2172	5	NNC	ENSG00000182796.15	novel	2313	4	NA	NA	13	-27	intron_retention	FALSE	canonical	3	14	junction_4	27.225906780124	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTGAATAAAATGGCATTA	-9	True	NA	-24	True	NA	NA	NA	55830866	55836217	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_55831084_55831256_55831350_55832958_55833542_55834850_55836038_55836125
H1_mix_00018100	chr12	+	2240	7	FSM	ENSG00000123374.11	ENST00000266970.9	2240	7	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_6	23.2050042495627	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTCCTCCTCTTATTT	-7	True	NA	24	True	ATTAAA	-26	NA	55966829	55972789	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_55967125_55967856_55967935_55968048_55968170_55968777_55968949_55969474_55969577_55971043_55971248_55971520
H1_mix_00018106	chr12	+	2339	5	FSM	ENSG00000139531.13	ENST00000266971.8	2319	5	-20	0	-3	0	multi-exon	FALSE	canonical	3	69	junction_2	42.3696530549874	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGGCCTGGGGAGTGA	-32	True	NA	11	True	AATAAA	-21	NA	55997255	56005525	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_55997340_55997614_55997724_56002211_56002272_56002542_56002721_56003617
H1_mix_00018114	chr12	+	1973	3	FSM	ENSG00000197728.11	ENST00000548590.1	1204	3	-316	-453	-69	0	multi-exon	FALSE	canonical	3	8340	junction_1	958.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGGCCTCACAATTCGC	11	False	NA	NA	False	ATTAAA	-18	NA	56041823	56044676	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56042170_56042424_56043494_56044118
H1_mix_00018119	chr12	+	677	3	FSM	ENSG00000229117.9	ENST00000546591.6	676	3	-1	0	0	0	multi-exon	FALSE	canonical	3	12955	junction_1	4922	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGCTGGAGTTGGATGGG	-1	True	NA	45	True	TATAAA	-34	NA	56116631	56117967	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56116800_56117188_56117212_56117481
H1_mix_00018121	chr12	+	552	4	FSM	ENSG00000229117.9	ENST00000358888.7	551	4	-1	0	0	0	multi-exon	FALSE	canonical	3	258	junction_2	9695.56098886954	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCATCTTGTCTATTATG	-1	True	NA	5	True	AATAAA	-32	NA	56116631	56117826	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56116660_56116774_56116931_56117188_56117212_56117481
H1_mix_00018127	chr12	+	778	4	FSM	ENSG00000139641.13	ENST00000550986.1	543	4	-235	0	-235	0	multi-exon	FALSE	canonical	3	524	junction_2	48.297688005397	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGCAAAGCAGGAGTCAA	1490	False	NA	NA	False	AAGAAA	-4	NA	56130097	56131286	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56130624_56130790_56130926_56131039_56131114_56131243
H1_mix_00018130	chr12	+	1258	5	FSM	ENSG00000196465.10	ENST00000405661.8	1258	5	0	0	0	0	multi-exon	FALSE	canonical	3	407	junction_1	137.101012031276	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCAGTGAGCCGAGAGATC	-7	True	NA	NA	False	NA	NA	NA	56152589	56156242	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56152632_56153872_56154093_56154812_56154841_56155054_56155199_56155418
H1_mix_00018131	chr12	+	720	8	FSM	ENSG00000196465.10	ENST00000552568.5	703	8	-17	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	263.666146356892	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTTTCAGACTGCTAT	-7	True	NA	18	True	AATAAA	-14	NA	56152589	56157976	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56152632_56153872_56154093_56154812_56154841_56155054_56155199_56155418_56155494_56157467_56157546_56157697_56157736_56157881
H1_mix_00018132	chr12	+	818	8	NIC	ENSG00000196465.10	novel	1034	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	407	junction_1	120.866936448851	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGGTTTCAGACTGCTA	-7	True	NA	17	True	AATAAA	-13	NA	56152589	56157975	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_56152632_56153872_56154093_56154812_56154841_56155054_56155199_56155418_56155593_56157467_56157546_56157697_56157736_56157881
H1_mix_00018133	chr12	+	835	8	NNC	ENSG00000196465.10	novel	1034	8	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	254.24156920182	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGACTGCTATTTTTTT	4	True	NA	24	True	AATAAA	-20	NA	56152600	56157982	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_56152632_56153851_56154093_56154812_56154841_56155054_56155199_56155418_56155593_56157467_56157546_56157697_56157736_56157881
H1_mix_00018134	chr12	+	1279	2	FSM	ENSG00000196465.10	ENST00000548548.1	887	2	-386	-6	-386	0	multi-exon	FALSE	canonical	3	812	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCAGACTGCTATTTTTT	1747	False	NA	23	True	AATAAA	-19	NA	56156550	56157981	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56157546_56157697
H1_mix_00018136	chr12	+	801	7	FSM	ENSG00000092841.19	ENST00000550697.6	708	7	-122	29	-109	0	multi-exon	FALSE	canonical	3	332	junction_5	6307.19043808114	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAAATAAACTTGCTCTC	783	False	NA	1	True	NA	NA	NA	56158236	56161550	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56158405_56158683_56158712_56159586_56159731_56159974_56160149_56160242_56160321_56160625_56160671_56161386
H1_mix_00018137	chr12	+	2047	7	FSM	ENSG00000092841.19	ENST00000547408.5	683	7	-95	-1269	-73	781	multi-exon	FALSE	canonical	3	6	junction_6	6489.19120966208	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCCCCTCTTGGCCCCTT	819	False	NA	NA	False	NA	NA	NA	56158272	56164277	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56158405_56158683_56158712_56159586_56159731_56159974_56160149_56160242_56160321_56162263_56162332_56162854
H1_mix_00018139	chr12	+	464	5	FSM	ENSG00000092841.19	ENST00000552297.5	454	5	-10	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	6824.33764185214	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGGTGAACTGCGCTT	-16	True	NA	76	True	NA	NA	NA	56158345	56160320	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56158405_56158683_56158712_56159497_56159623_56159974_56160149_56160242
H1_mix_00018140	chr12	+	647	6	FSM	ENSG00000092841.19	ENST00000547649.5	655	6	-16	24	0	0	multi-exon	FALSE	canonical	3	12145	junction_1	967.927063367897	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAAATAAACTTGCTCTC	-16	True	NA	1	True	NA	NA	NA	56158345	56161550	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56158405_56158683_56158712_56159586_56159731_56159974_56160149_56160242_56160321_56161386
H1_mix_00018141	chr12	+	1567	6	FSM	ENSG00000092841.19	ENST00000550184.5	1564	6	-3	0	0	0	multi-exon	FALSE	canonical	3	332	junction_4	6619.14879723972	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAAATAAACTTGCTCTC	-16	True	NA	1	True	NA	NA	NA	56158345	56161550	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56158405_56158683_56159731_56159974_56160149_56160242_56160321_56160625_56160671_56161386
H1_mix_00018142	chr12	+	513	6	FSM	ENSG00000092841.19	ENST00000549017.5	502	6	-11	0	0	0	multi-exon	FALSE	canonical	2	55	junction_3	5504.80141694503	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCGGTTCGGTTCTTTCT	-16	True	NA	25	True	AATAAA	-14	NA	56158345	56161574	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56158405_56158683_56158712_56159586_56159623_56160024_56160149_56160242_56160321_56161386
H1_mix_00018143	chr12	+	532	5	FSM	ENSG00000092841.19	ENST00000548580.5	528	5	0	-4	0	0	multi-exon	FALSE	canonical	3	740	junction_2	5717.81542090159	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCGGTTCTTTCTTTCCT	-16	True	NA	30	True	AATAAA	-19	NA	56158345	56161579	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56158405_56158683_56158712_56159974_56160149_56160242_56160321_56161386
H1_mix_00018145	chr12	+	621	5	NIC	ENSG00000092841.19	novel	708	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	68	junction_1	6211.95200299391	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCGGTTCTTTCTTTCCT	11	True	NA	30	True	AATAAA	-19	NA	56158372	56161579	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_56158405_56159586_56159731_56159974_56160149_56160242_56160321_56161386
H1_mix_00018148	chr12	+	1413	7	FSM	ENSG00000139579.13	ENST00000267023.9	1400	7	-13	0	-13	0	multi-exon	FALSE	canonical	3	145	junction_1	56.9280735275273	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTTGGACTCCTTTG	-44	True	NA	14	True	AATAAA	-14	NA	56224328	56229854	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56224442_56224833_56224936_56225372_56225512_56225623_56225696_56226178_56226261_56226355_56226420_56229013
H1_mix_00018149	chr12	+	1792	6	FSM	ENSG00000139579.13	ENST00000380198.6	1775	6	-17	0	0	0	multi-exon	FALSE	canonical	3	277	junction_1	18.0709711969224	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTTGGACTCCTTTG	-31	True	NA	14	True	AATAAA	-14	NA	56224341	56229854	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56224936_56225372_56225512_56225623_56225696_56226178_56226261_56226355_56226420_56229013
H1_mix_00018150	chr12	+	1483	7	FSM	ENSG00000139579.13	ENST00000341463.5	1411	7	-72	0	-13	0	multi-exon	FALSE	canonical	3	50	junction_1	91.3911009526274	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCACTCTACTCTGTGTTG	-44	True	NA	4	True	AATAAA	-4	NA	56224328	56229844	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56224522_56224833_56224936_56225372_56225512_56225623_56225696_56226178_56226261_56226355_56226420_56229013
H1_mix_00018151	chr12	+	1570	5	FSM	ENSG00000135469.14	ENST00000308197.10	1570	5	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	24.6322958735072	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCTTTATTATATTGTT	0	True	NA	NA	False	AATAAA	-16	NA	56266941	56270966	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56267253_56267793_56267941_56269058_56269252_56269459_56269562_56270149
H1_mix_00018156	chr12	+	662	1	FSM	ENSG00000257576.1	ENST00000547203.1	1702	1	276	764	276	-764	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGATATGGCAATTGCTA	302	False	NA	NA	False	AATAGA	-12	NA	56511277	56511939	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56511300_56511900
H1_mix_00018161	chr12	+	2318	6	FSM	ENSG00000166886.13	ENST00000342556.6	2318	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	13.311649033835	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTATGACCCCTGCCTTGA	82	False	NA	15	True	AATAAA	-20	NA	57089093	57095475	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57089355_57091124_57091999_57092447_57092582_57092916_57092969_57093062_57093196_57094611
H1_mix_00018164	chr12	+	8494	51	NNC	ENSG00000123384.14	novel	14923	89	NA	NA	-2612	33	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	88.7135277170286	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTGTCTGCCTGTGTGT	5841	False	NA	NA	False	AAAAAG	-33	NA	57184756	57213394	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_57184991_57185080_57185206_57185530_57185909_57187266_57187457_57190804_57191010_57191319_57191513_57192844_57192971_57193051_57193305_57193565_57193686_57193898_57194013_57194353_57194504_57194576_57194700_57194984_57195102_57195270_57195400_57195657_57195781_57195862_57196004_57196086_57196278_57196981_57197166_57197298_57197385_57197544_57197665_57198155_57198344_57198464_57198671_57199211_57199401_57199876_57200026_57200441_57200536_57200698_57200816_57201033_57201154_57201496_57201620_57201779_57201906_57202420_57202538_57203180_57203288_57203388_57203522_57204409_57204530_57204626_57204750_57205108_57205250_57205350_57205486_57205557_57205678_57206472_57206742_57208037_57208217_57208710_57208818_57209082_57209200_57209691_57209869_57210028_57210170_57210306_57210481_57210717_57210880_57211175_57211351_57211486_57211589_57211749_57211815_57211926_57212018_57212116_57212262_57212414
H1_mix_00018168	chr12	+	2157	12	FSM	ENSG00000182199.11	ENST00000328923.8	2157	12	0	0	0	0	multi-exon	FALSE	canonical	3	1070	junction_5	57.4884824972334	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGCTTCTGTTTGATCC	-11	True	NA	29	True	AATGAA	-16	NA	57229710	57234935	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57229812_57230802_57231001_57231480_57231561_57231712_57231914_57232210_57232293_57232452_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
H1_mix_00018169	chr12	+	2006	12	FSM	ENSG00000182199.11	ENST00000414700.7	2006	12	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	315.697731780321	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTTTCCATTACTGTG	75	False	NA	34	True	AATAAA	-13	NA	57230085	57234726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57230245_57230802_57231001_57231480_57231561_57231712_57231914_57232210_57232293_57232452_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
H1_mix_00018171	chr12	+	2127	12	FSM	ENSG00000182199.11	ENST00000449049.7	2121	12	-6	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	336.377984951944	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTATCTAATAAAATGCT	-2	True	NA	7	True	NA	NA	NA	57230353	57234699	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57230661_57230802_57231001_57231480_57231561_57231712_57231914_57232210_57232293_57232452_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
H1_mix_00018172	chr12	+	1899	11	FSM	ENSG00000182199.11	ENST00000555116.5	1885	11	-14	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	516.907960859571	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAACAGTGATTTGTCTCC	-2	True	NA	71	True	NA	NA	NA	57230353	57234763	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57230421_57230802_57231001_57231712_57231914_57232210_57232293_57232424_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
H1_mix_00018181	chr12	+	2809	21	FSM	ENSG00000166986.15	ENST00000262027.10	2797	21	-12	0	0	0	multi-exon	FALSE	canonical	3	1572	junction_9	80.0520299555233	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTGAGACCTTTCCTTT	8023	False	NA	18	True	AATAAA	-22	NA	57488055	57516652	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57488200_57489018_57489110_57489266_57489346_57489423_57489559_57489895_57489972_57490206_57490380_57490537_57490645_57498156_57498274_57498419_57498624_57500320_57500523_57504224_57504300_57511697_57511869_57512007_57512104_57512235_57512354_57512750_57512965_57514719_57514852_57514953_57515059_57515149_57515337_57515919_57515992_57516244_57516338_57516434
H1_mix_00018182	chr12	+	2989	19	FSM	ENSG00000166986.15	ENST00000545888.6	2979	19	-10	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	386.333065701502	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGACCTTTCCTTTTGT	8023	False	NA	21	True	AATAAA	-25	NA	57488055	57516655	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57488200_57489018_57489110_57489266_57489346_57489423_57489559_57490206_57490380_57490537_57490645_57498156_57498274_57498419_57498624_57500320_57500523_57504224_57504300_57511697_57511869_57512007_57512104_57512235_57512354_57512750_57512965_57514719_57514852_57514953_57515059_57515149_57515337_57515919_57516338_57516434
H1_mix_00018187	chr12	+	557	6	FSM	ENSG00000166987.15	ENST00000548887.5	568	6	11	0	11	0	multi-exon	FALSE	canonical	1	1	junction_1	27.7229147096765	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGAGTTCCTCCTACAACTC	8	True	NA	NA	False	NA	NA	NA	57520720	57525414	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57520744_57524028_57524093_57524279_57524417_57524719_57524823_57524952_57525116_57525347
H1_mix_00018193	chr12	+	3314	2	FSM	ENSG00000155980.13	ENST00000676437.1	3314	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGGCAGTTTGCATTTT	812	False	NA	NA	False	AATAAA	-10	NA	57581935	57585898	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57581953_57582601
H1_mix_00018195	chr12	+	2891	11	FSM	ENSG00000166908.18	ENST00000540759.6	2876	11	-15	0	-4	0	multi-exon	FALSE	canonical	1	5	junction_10	61.8922450715758	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTACAGAAATGCCTT	-42	True	NA	18	True	AATAAA	-15	NA	57591187	57603418	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57591464_57594024_57594123_57595125_57595223_57595887_57596032_57599064_57599212_57599399_57599439_57600323_57600438_57600810_57601079_57601244_57601349_57601525_57601637_57601925
H1_mix_00018199	chr12	+	2508	7	NIC	ENSG00000178498.16	novel	2028	7	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	42.3070784726255	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGCCACACCCGTTCTT	1599	False	NA	17	True	AATAAA	-23	NA	57604568	57609800	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_57604859_57605343_57605732_57606189_57606253_57606442_57606519_57606864_57607614_57608519_57608738_57609076
H1_mix_00018200	chr12	+	2028	7	FSM	ENSG00000178498.16	ENST00000337737.8	2028	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	39.460599195766	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCACACCCGTTCTTTT	-2	True	NA	19	True	AATAAA	-25	NA	57604823	57609802	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57604859_57605570_57605732_57606189_57606253_57606442_57606519_57606864_57607614_57608519_57608738_57609076
H1_mix_00018203	chr12	+	2573	15	FSM	ENSG00000240771.8	ENST00000286494.9	2554	15	-19	0	-19	0	multi-exon	FALSE	canonical	0	0	junction_1	1.45160010235011	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGCTGTCTTGGCAGA	17	False	NA	29	True	AATAAA	-18	NA	57611415	57617245	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57611992_57612929_57613145_57613263_57613360_57613439_57613517_57613693_57613761_57614015_57614120_57614330_57614401_57614515_57614606_57614688_57614782_57614966_57615018_57615236_57615315_57615511_57615713_57615836_57616018_57616283_57616496_57616783
H1_mix_00018207	chr12	+	2473	14	NIC	ENSG00000135506.16	novel	2505	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	188	junction_6	146.014670576859	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCATCAACCTTTTTTGT	-10	True	NA	23	True	AATAAA	-14	NA	57694131	57721555	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_57694324_57694749_57694927_57695779_57695844_57695961_57696039_57696274_57696374_57715759_57715971_57716088_57716194_57716411_57716513_57716692_57716745_57717869_57717959_57718145_57718377_57718992_57719183_57720405_57720519_57720783
H1_mix_00018208	chr12	+	2518	14	FSM	ENSG00000135506.16	ENST00000257966.12	2505	14	-13	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	192.29686123345	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCATCAACCTTTTTTGT	-10	True	NA	23	True	AATAAA	-14	NA	57694131	57721555	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57694324_57694749_57694927_57695779_57695844_57695961_57696039_57696274_57696374_57715759_57715971_57716088_57716194_57716411_57716513_57716692_57716745_57717869_57717959_57718145_57718422_57718992_57719183_57720405_57720519_57720783
H1_mix_00018209	chr12	+	2682	15	FSM	ENSG00000135506.16	ENST00000315970.12	2682	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	189.599362782017	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCAACCTTTTTTGTGG	-10	True	NA	25	True	AATAAA	-16	NA	57694131	57721557	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57694324_57694749_57694927_57695779_57695844_57695961_57696039_57696274_57696374_57715759_57715971_57716091_57716194_57716411_57716513_57716692_57716745_57717869_57717959_57718145_57718422_57718992_57719183_57720098_57720264_57720405_57720519_57720783
H1_mix_00018210	chr12	+	2472	14	FSM	ENSG00000135506.16	ENST00000389142.9	2457	14	-15	0	0	0	multi-exon	FALSE	canonical	3	266	junction_11	112.3457259097	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCAACCTTTTTTGTGG	-10	True	NA	25	True	AATAAA	-16	NA	57694131	57721557	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57694324_57694749_57694927_57695779_57695844_57695961_57696039_57696274_57696374_57715759_57715971_57716091_57716194_57716411_57716513_57716692_57716745_57717869_57717959_57718145_57718377_57718992_57719183_57720405_57720519_57720783
H1_mix_00018212	chr12	+	2612	15	NIC	ENSG00000135506.16	novel	2682	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	188	junction_6	169.584441070109	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCAACCTTTTTTGTGG	18	True	NA	25	True	AATAAA	-16	NA	57694159	57721557	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_57694324_57694749_57694927_57695779_57695844_57695961_57696039_57696274_57696374_57715759_57715971_57716088_57716194_57716411_57716513_57716692_57716745_57717869_57717959_57718145_57718377_57718992_57719183_57720098_57720264_57720405_57720519_57720783
H1_mix_00018219	chr12	+	2571	2	FSM	ENSG00000139266.6	ENST00000548358.1	1668	2	-196	-707	-196	-288	multi-exon	FALSE	canonical	3	20	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCAACCCCAGTTTAAGC	1617	False	NA	NA	False	NA	NA	NA	57757290	57760123	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57758301_57758562
H1_mix_00018221	chr12	+	2510	2	ISM	ENSG00000123427.17	ENST00000333012.5	2762	4	1992	-125	1992	125	3prime_fragment	FALSE	canonical	2	5	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTCCTCCGGCCAGCAG	1712	False	NA	NA	False	AAGAAA	-19	NA	57774669	57782666	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_57774768_57780254
H1_mix_00018223	chr12	+	1233	7	FSM	ENSG00000123297.20	ENST00000323833.12	1218	7	-15	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	168.738127154344	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATACTGGATTTAGCTTT	-12	True	NA	20	True	AATAAA	-22	NA	57782760	57796734	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57782859_57783109_57783284_57786162_57786292_57787039_57787163_57791964_57792028_57792985_57793074_57796176
H1_mix_00018224	chr12	+	1997	6	FSM	ENSG00000123297.20	ENST00000652027.2	1997	6	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_2	22.5690052948729	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTCTTTCTTTTG	14	True	NA	16	True	ATTAAA	-32	NA	57782786	57797587	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57782859_57783109_57783284_57786162_57786292_57787039_57787163_57792985_57793074_57796176
H1_mix_00018231	chr12	+	3273	22	FSM	ENSG00000135655.16	ENST00000280377.10	14971	22	-48	11746	0	0	multi-exon	FALSE	canonical	3	83	junction_6	32.9366188561911	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGTTTTGATTAATTAT	0	True	NA	23	True	AATAAA	-16	NA	62260355	62404643	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_62260504_62294178_62294307_62302789_62302921_62314789_62314917_62321463_62321610_62325871_62325934_62349220_62349308_62355330_62355476_62381489_62381664_62383839_62383999_62384077_62384303_62389430_62389515_62389604_62389700_62389796_62389989_62390863_62390980_62391156_62391430_62391815_62391887_62392271_62392388_62393052_62393203_62396294_62396399_62401186_62401276_62404192
H1_mix_00018234	chr12	+	2226	7	FSM	ENSG00000135655.16	ENST00000312635.10	2226	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	63.4229628937518	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGTTTTTTATTTTTGA	3	True	NA	NA	False	AATAAA	-15	NA	62260396	62336690	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_62260504_62294178_62294307_62302789_62302921_62314789_62314917_62321463_62321610_62325871_62325934_62335165
H1_mix_00018239	chr12	+	2640	9	FSM	ENSG00000061987.16	ENST00000551307.5	2640	9	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_2	31.7243991274855	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAGAAGAGATATT	NA	False	NA	NA	False	NA	NA	NA	62559909	62593081	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_62561114_62565236_62565381_62566321_62566451_62571391_62571583_62578444_62578506_62580296_62580421_62585293_62585502_62588073_62588157_62592585
H1_mix_00018245	chr12	+	2235	6	FSM	ENSG00000118600.13	ENST00000537373.6	1966	6	-290	21	3	6	multi-exon	FALSE	canonical	3	17	junction_1	28.2729552753157	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTGAGATTGAGTAATTT	NA	False	NA	66	True	AATAAA	-1	NA	63779835	63809537	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_63780463_63781018_63781175_63784969_63785073_63802090_63802406_63805233_63805405_63808674
H1_mix_00018247	chr12	+	1852	6	FSM	ENSG00000118600.13	ENST00000261234.11	1854	6	0	2	0	2	multi-exon	FALSE	canonical	3	84	junction_5	3.16227766016838	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAGAGGTTTAATTGG	0	True	NA	89	True	AATAAA	-24	NA	63779908	63809560	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_63780130_63781018_63781175_63784969_63785073_63802090_63802406_63805233_63805405_63808674
H1_mix_00018251	chr12	+	4078	1	ISM	ENSG00000196935.9	ENST00000355086.8	22920	22	299140	14300	16203	84	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTAGCTTGCATTAAATAA	NA	False	NA	90	True	NA	NA	NA	64143839	64147917	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_64143800_64147900
H1_mix_00018253	chr12	+	787	7	FSM	ENSG00000184575.12	ENST00000538086.5	787	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	448.352323017909	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTTCATCGAATGATTAT	4492	False	NA	NA	False	NA	NA	NA	64424703	64431679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_64424724_64425037_64425139_64425337_64425458_64425814_64425910_64428050_64428121_64430048_64430288_64431537
H1_mix_00018259	chr12	+	3529	4	FSM	ENSG00000153179.13	ENST00000283172.8	1099	4	-272	-2158	-254	6	multi-exon	FALSE	canonical	3	24	junction_2	71.9459673798485	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGTTTATTTATGAT	12	True	NA	19	True	ATTAAA	-21	NA	64610240	64697570	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_64610744_64684786_64684895_64691469_64691580_64694762
H1_mix_00018263	chr12	+	488	1	FSM	ENSG00000276853.1	ENST00000621847.1	656	1	-143	311	-143	-311	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTATGTATAATTTCTTT	1096	False	NA	NA	False	ATTAAA	-16	NA	65171118	65171606	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_65171100_65171600
H1_mix_00018266	chr12	+	4140	5	FSM	ENSG00000149948.14	ENST00000403681.7	4117	5	-23	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	16.1709616287962	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGGAGGGAGACACTCAC	11	True	NA	27	True	AATAAA	-17	NA	65824459	65966291	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_65825382_65828000_65828088_65838518_65838570_65951382_65951416_65963244
H1_mix_00018268	chr12	+	611	5	FSM	ENSG00000149948.14	ENST00000393577.7	611	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	15.3195136998535	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTCATTGCTGCTCCC	40	False	NA	NA	False	AATAAA	-23	NA	65825122	65952536	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_65825382_65828000_65828088_65838518_65838570_65951382_65951416_65952355
H1_mix_00018276	chr12	+	8912	3	FSM	ENSG00000127334.11	ENST00000344096.4	8888	3	-24	0	-24	0	multi-exon	FALSE	canonical	3	63	junction_2	1	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGCGAATTTGTCATCT	-1	True	NA	3	True	AATAAA	-13	NA	67648720	67665406	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_67649183_67649796_67649946_67657105
H1_mix_00018278	chr12	+	2121	2	FSM	ENSG00000127334.11	ENST00000319833.6	566	2	-53	-1502	-53	0	multi-exon	FALSE	canonical	3	63	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACTTTCAGAAACTTTTT	858	False	NA	27	True	TATAAA	-28	NA	67649628	67658909	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_67649946_67657105
H1_mix_00018280	chr12	+	303	1	Intergenic	novelGene_319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCACGGAGCAAAGAACACA	NA	False	NA	NA	False	NA	NA	NA	67771513	67771816	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_67771500_67771800
H1_mix_00018292	chr12	+	7491	11	FSM	ENSG00000135679.27	ENST00000258149.11	7490	11	-1	0	-1	0	multi-exon	FALSE	canonical	3	24	junction_8	2.85657137141714	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAGAGAGGAGTGGTACT	-20	True	NA	NA	False	AATGAA	-19	NA	68808175	68845544	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_68808492_68809207_68809293_68813553_68813629_68816811_68816946_68820324_68820375_68824362_68824431_68824554_68824652_68828770_68828932_68835828_68835985_68836671_68836750_68839273
H1_mix_00018300	chr12	+	2229	11	FSM	ENSG00000111605.18	ENST00000266679.8	2229	11	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_5	418.910778090037	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGTGTAAAGCTGTTCA	14	False	NA	34	True	AATAAA	-14	NA	69239615	69269939	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_69239707_69251128_69251339_69253050_69253155_69256696_69256843_69257731_69257906_69258034_69258146_69258589_69259095_69259427_69259544_69260043_69260198_69262372_69262563_69269511
H1_mix_00018303	chr12	+	1491	7	FSM	ENSG00000127337.7	ENST00000247843.7	1468	7	-23	0	0	0	multi-exon	FALSE	canonical	3	307	junction_3	22.5345413877353	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTATTGTGACATCACATC	-13	True	NA	89	True	AATACA	-16	NA	69359719	69390870	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_69360024_69362787_69362908_69365632_69365700_69365789_69365885_69370705_69370799_69370887_69370976_69390146
H1_mix_00018314	chr12	+	1212	2	FSM	ENSG00000166226.13	ENST00000550653.1	567	2	-614	-31	-614	31	multi-exon	FALSE	canonical	3	2460	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGAACTCTACTTAATG	5574	False	NA	60	True	NA	NA	NA	69599099	69601601	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_69600005_69601294
H1_mix_00018320	chr12	+	1323	12	FSM	ENSG00000166268.11	ENST00000548892.5	1319	12	-4	0	-4	0	multi-exon	FALSE	canonical	1	1	junction_2	2.79905533060739	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATGTGATGTTTGATT	NA	False	NA	NA	False	AATAAA	-18	NA	69926570	69958723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_69926735_69927684_69927749_69932512_69932599_69936112_69936188_69936282_69936336_69936452_69936633_69952112_69952176_69952798_69952887_69955362_69955438_69957821_69957943_69958248_69958324_69958444
H1_mix_00018325	chr12	+	2385	12	NIC	ENSG00000111596.14	novel	2844	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_3	145.881249113706	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	5427	False	NA	11	True	AATAAA	-19	NA	70278131	70354993	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_70278275_70310894_70311018_70319297_70319365_70335437_70335564_70337388_70337514_70338442_70338564_70338665_70338823_70342106_70342169_70342257_70342308_70344127_70344229_70346179_70346325_70353828
H1_mix_00018333	chr12	+	1108	2	FSM	ENSG00000173451.7	ENST00000547843.1	672	2	-436	0	-256	0	multi-exon	FALSE	canonical	3	22	junction_1	0	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGATGTTTCTGTTTTT	24	True	NA	NA	False	ATTAAA	-21	NA	71664044	71665440	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_71664581_71664868
H1_mix_00018339	chr12	+	3161	17	FSM	ENSG00000121749.16	ENST00000485960.7	3157	17	-4	0	-4	0	multi-exon	FALSE	canonical	3	96	junction_1	14.2553443925427	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTGTTTTTAGTTAAATT	-12	True	NA	10	True	AATAAA	-13	NA	71839754	71924313	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_71839812_71872069_71872169_71872928_71873004_71880468_71880608_71884810_71885022_71893221_71893325_71894685_71894884_71895946_71896076_71896676_71896781_71897846_71897942_71907021_71907139_71913825_71913927_71917697_71917798_71918450_71918549_71920730_71920848_71921367_71921455_71922982
H1_mix_00018340	chr12	+	2326	18	NIC	ENSG00000121749.16	novel	6184	18	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	39.0747664131497	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATTATTTTTGTAGTTAC	3	True	NA	12	True	ATTAAA	-19	NA	71839769	71923362	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_71839812_71841100_71841232_71872069_71872169_71872928_71873004_71880468_71880608_71884810_71885022_71893221_71893325_71894685_71894884_71895946_71896076_71896676_71896781_71897846_71897942_71907021_71907139_71913825_71913927_71917697_71917798_71918450_71918549_71920730_71920848_71921367_71921455_71922982
H1_mix_00018341	chr12	+	10968	19	FSM	ENSG00000072657.10	ENST00000261180.10	11047	19	79	0	79	0	multi-exon	FALSE	canonical	2	7	junction_2	3.80261443525502	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGGTAAAAAGTGATTTC	65	False	NA	NA	False	AATAAA	-15	NA	72272448	72670758	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_72273558_72286680_72286955_72377994_72378122_72469757_72469913_72473066_72473181_72499497_72499636_72542290_72542357_72562164_72562231_72562852_72563041_72568567_72568657_72575254_72575389_72575486_72575543_72618890_72619039_72621107_72621206_72621643_72621752_72652321_72652490_72653015_72653157_72656926_72657009_72663051
H1_mix_00018352	chr12	+	805	3	FSM	ENSG00000111046.4	ENST00000228641.4	1329	3	524	0	524	0	multi-exon	FALSE	canonical	2	4	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTTGGTCCTAATTTGA	179	False	NA	NA	False	ATTAAA	-19	NA	80708157	80709474	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_80708239_80708523_80708615_80708841
H1_mix_00018357	chr12	+	1329	4	FSM	ENSG00000180318.4	ENST00000316824.4	1332	4	0	3	0	-3	multi-exon	FALSE	canonical	2	3	junction_1	1.63299316185545	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCTTCTGTTATAGATT	1	True	NA	NA	False	AATAAA	-11	NA	85280219	85301781	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_85280488_85283571_85283877_85286852_85286982_85301154
H1_mix_00018361	chr12	+	2829	7	FSM	ENSG00000133641.18	ENST00000356891.4	2829	7	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_1	44.7415417208164	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGAGTCTGAATTTTTTG	-1	True	NA	16	True	AATAAA	-18	NA	88035535	88050160	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_88035739_88040147_88040266_88042824_88042921_88043598_88043716_88045581_88045780_88046806_88046977_88048233
H1_mix_00018362	chr12	+	557	4	FSM	ENSG00000139324.12	ENST00000549011.5	574	4	17	0	6	0	multi-exon	FALSE	canonical	1	1	junction_1	56.8057117628931	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATCTTTTTTCTAGCAGCT	6	True	NA	NA	False	NA	NA	NA	88142312	88154324	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_88142397_88148287_88148505_88153290_88153510_88154287
H1_mix_00018363	chr12	+	657	5	FSM	ENSG00000139324.12	ENST00000551088.1	646	5	-11	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	53.4345393916706	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTTTCTCCGTGGAAAGG	-11	True	NA	NA	False	NA	NA	NA	88142295	88160710	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_88142488_88148287_88148505_88154287_88154388_88160113_88160230_88160678
H1_mix_00018371	chr12	+	420	3	NNC	ENSG00000257345.2	novel	898	4	NA	NA	2513	-212	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	283.5	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTCTTCTATGCATGT	NA	False	NA	17	True	AATAAA	-17	NA	93005927	93019608	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_93006014_93006093_93006230_93019410
H1_mix_00018372	chr12	+	580	2	ISM	ENSG00000257345.2	ENST00000552353.2	898	4	6630	212	2433	-212	3prime_fragment	FALSE	canonical	3	632	junction_1	0	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTCTTCTATGCATGT	NA	False	NA	17	True	AATAAA	-17	NA	93005847	93019608	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_93006230_93019410
H1_mix_00018377	chr12	+	15577	6	FSM	ENSG00000198015.14	ENST00000552217.6	15560	6	-21	4	-21	-4	multi-exon	FALSE	canonical	3	652	junction_1	698.96740982681	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGAGGTGTGTTCCTGGT	-2	True	NA	NA	False	AATAAA	-14	NA	93467492	93516210	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_93467555_93469188_93469356_93476953_93477018_93479387_93479473_93487496_93487661_93501175
H1_mix_00018379	chr12	+	965	2	FSM	ENSG00000198015.14	ENST00000552938.1	999	2	34	0	34	0	multi-exon	FALSE	canonical	3	538	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGATTGAACTTGATA	NA	False	NA	-9	True	ATTAAA	-6	NA	93500780	93502621	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_93501029_93501904
H1_mix_00018381	chr12	+	2663	3	FSM	ENSG00000120833.14	ENST00000536696.6	1065	3	-621	-977	-40	0	multi-exon	FALSE	canonical	3	72	junction_1	64.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTATTAAATAAAAAAAACC	259	False	NA	-15	True	NA	NA	NA	93570358	93576174	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_93571217_93572684_93573037_93574721
H1_mix_00018382	chr12	+	2881	3	FSM	ENSG00000120833.14	ENST00000622746.4	2881	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	93	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTTACCTTATTTTCAT	-16	True	NA	NA	False	AATAAA	-14	NA	93571680	93576744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_93572187_93572684_93573037_93574721
H1_mix_00018383	chr12	+	1858	3	FSM	ENSG00000120833.14	ENST00000549122.5	2391	3	501	32	-38	0	multi-exon	FALSE	canonical	3	65	junction_1	68	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTATTAAATAAAAAAAACC	-13	True	NA	-15	True	NA	NA	NA	93571861	93576174	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_93571915_93572684_93573037_93574721
H1_mix_00018384	chr12	+	2281	3	NIC	ENSG00000120833.14	novel	984	3	NA	NA	0	0	intron_retention	FALSE	canonical	3	20	junction_1	90.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTATTAAATAAAAAAAACC	25	True	NA	-15	True	NA	NA	NA	93571899	93576174	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_93572376_93572684_93573037_93574721
H1_mix_00018394	chr12	+	2381	12	FSM	ENSG00000028203.19	ENST00000551994.5	2362	12	-19	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	114.028269657097	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAGATAGAAGAAAAGTAAG	-14	True	NA	NA	False	AATAAA	-3	NA	95217798	95300654	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_95217887_95251939_95252072_95257153_95257240_95262905_95263082_95266356_95266633_95270038_95270189_95274741_95274890_95282312_95282645_95287663_95287858_95294271_95294373_95296050_95296259_95300164
H1_mix_00018396	chr12	+	4518	12	FSM	ENSG00000028203.19	ENST00000436874.6	4510	12	-8	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	93.4814252111302	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTCTTCTTGCCATGA	-14	True	NA	11	True	AATAAA	-23	NA	95217798	95302799	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_95217887_95251939_95252072_95257149_95257240_95262905_95263082_95266356_95266633_95270050_95270189_95274741_95274890_95282312_95282645_95287663_95287858_95294271_95294373_95296050_95296259_95300164
H1_mix_00018398	chr12	+	2931	13	NIC	ENSG00000028203.19	novel	2712	13	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	107.065400573668	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGATGTGTGCTGGGGTT	25	False	NA	13	True	AATAAA	-16	NA	95217837	95301170	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_95217887_95251939_95252072_95256549_95256623_95257149_95257240_95262905_95263082_95266356_95266633_95270038_95270189_95274745_95274890_95282312_95282645_95287663_95287858_95294271_95294373_95296050_95296259_95300164
H1_mix_00018399	chr12	+	2831	12	NIC	ENSG00000028203.19	novel	3002	13	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	118.033473330434	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGATGTGTGCTGGGGTT	27	False	NA	13	True	AATAAA	-16	NA	95217839	95301170	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_95217887_95251939_95252072_95256549_95256623_95262905_95263082_95266356_95266633_95270050_95270189_95274741_95274890_95282312_95282645_95287663_95287858_95294271_95294373_95296050_95296259_95300164
H1_mix_00018401	chr12	+	3942	12	FSM	ENSG00000028203.19	ENST00000356859.8	3942	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	122.245654319489	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATGTGTGCTGGGGTTTG	NA	False	NA	15	True	AATAAA	-18	NA	95251944	95301172	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_95252072_95256549_95256623_95257149_95257240_95262905_95263082_95266356_95266633_95270050_95270189_95274741_95274890_95282312_95282645_95287663_95287858_95294271_95294373_95296050_95296259_95299093
H1_mix_00018406	chr12	+	2347	11	FSM	ENSG00000111142.14	ENST00000551840.5	1874	11	-473	0	169	0	multi-exon	TRUE	canonical	3	222	junction_1	186.511152481561	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTTTCAGATCTGAGAG	NA	False	NA	23	True	AATAAA	-1	NA	95473688	95514326	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_95474331_95476073_95476179_95483214_95483281_95485878_95485982_95494055_95494218_95494956_95495139_95496003_95496099_95504064_95504162_95511894_95511999_95512800_95512917_95513651
H1_mix_00018419	chr12	+	4036	16	FSM	ENSG00000139350.12	ENST00000266742.9	4015	16	-21	0	-2	0	multi-exon	FALSE	canonical	3	94	junction_2	39.1360021804306	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTGTCAGATATTGATCC	-11	True	NA	6	True	ATTAAA	-18	NA	96907235	96953780	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_96907301_96907603_96907857_96909751_96909896_96912722_96912818_96917620_96917738_96919984_96920126_96934975_96935206_96936610_96936813_96937197_96937394_96940408_96940538_96942576_96942625_96943559_96943763_96944638_96944796_96945692_96945850_96951431_96951499_96951948
H1_mix_00018426	chr12	+	4136	9	FSM	ENSG00000120802.14	ENST00000556029.6	4136	9	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_5	172.85163435733	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGATTTCTGGATAACAT	-35	True	NA	53	True	AATAAA	-21	NA	98515589	98550351	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_98516147_98527885_98528013_98531679_98531839_98537474_98537573_98544229_98544350_98544441_98544538_98544950_98545062_98546358_98546448_98547572
H1_mix_00018427	chr12	+	3627	4	FSM	ENSG00000120802.14	ENST00000266732.8	3615	4	-12	0	0	0	multi-exon	FALSE	canonical	3	338	junction_3	165.992637052237	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTGGTCTCCAGAAACA	-7	True	NA	19	True	AATAAA	-21	NA	98515617	98535634	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_98516147_98527885_98528013_98531679_98531839_98532822
H1_mix_00018428	chr12	+	2465	8	FSM	ENSG00000120802.14	ENST00000343315.9	2465	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	223.146606882707	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAAAAAGGGCCAGGCGC	-7	True	NA	NA	False	NA	NA	NA	98515617	98548828	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_98516147_98527885_98528013_98531679_98531839_98537474_98537573_98544441_98544538_98544950_98545062_98546358_98546448_98547572
H1_mix_00018432	chr12	+	6067	8	FSM	ENSG00000075415.15	ENST00000401722.7	6087	8	13	7	13	5	multi-exon	FALSE	canonical	3	72	junction_1	1000.51193018823	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGAATCATTTGTCTTTT	NA	False	NA	17	True	AATAAA	-14	NA	98593603	98606372	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_98593741_98593978_98594136_98595726_98595849_98597855_98598036_98598521_98598704_98599954_98600128_98601170_98601282_98601367
H1_mix_00018433	chr12	+	1427	8	FSM	ENSG00000075415.15	ENST00000551123.5	1417	8	-10	0	0	0	multi-exon	FALSE	canonical	2	23	junction_3	1413.79124112062	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCCTGTGACTTATTTT	-2	True	NA	17	True	AATAAA	-15	NA	98593685	98601707	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_98593741_98593978_98594136_98595432_98595662_98597855_98598036_98598521_98598704_98599954_98600128_98601170_98601282_98601367
H1_mix_00018434	chr12	+	5984	8	FSM	ENSG00000075415.15	ENST00000552981.6	5984	8	0	0	0	0	multi-exon	FALSE	canonical	3	2121	junction_1	319.070269274174	1588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTGTTGAATCATTTGT	-2	True	NA	12	True	AATAAA	-9	NA	98593685	98606367	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_98593741_98593974_98594136_98595726_98595849_98597855_98598036_98598521_98598704_98599954_98600128_98601170_98601282_98601367
H1_mix_00018439	chr12	+	2935	11	FSM	ENSG00000075089.10	ENST00000546902.5	1877	11	-1061	3	-110	0	multi-exon	FALSE	canonical	3	9	junction_1	98.9725214390338	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTGTGGGCAGAATAT	NA	False	NA	7	True	AATAAA	-14	NA	100199754	100224421	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_100201061_100204939_100205058_100205675_100205745_100207662_100207787_100210072_100210209_100210294_100210352_100212255_100212355_100212449_100212529_100218414_100218587_100220007_100220147_100223785
H1_mix_00018440	chr12	+	1678	11	FSM	ENSG00000075089.10	ENST00000552376.5	1659	11	-19	0	0	0	multi-exon	FALSE	canonical	3	26	junction_9	94.5541643715389	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTGTGGGCAGAATAT	-7	True	NA	7	True	AATAAA	-14	NA	100200810	100224421	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_100200920_100204939_100205058_100205675_100205745_100207662_100207787_100210072_100210209_100210294_100210352_100212255_100212355_100212449_100212529_100218414_100218587_100220067_100220147_100223785
H1_mix_00018441	chr12	+	1753	11	FSM	ENSG00000075089.10	ENST00000548180.5	1747	11	-6	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	99.2613217723802	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGTGGGCAGAATATCT	-7	True	NA	9	True	AATAAA	-16	NA	100200810	100224423	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_100200920_100204939_100205058_100205675_100205758_100207662_100207787_100210072_100210209_100210294_100210352_100212255_100212355_100212449_100212529_100218414_100218587_100220007_100220147_100223785
H1_mix_00018442	chr12	+	1741	11	FSM	ENSG00000075089.10	ENST00000188312.7	1737	11	-4	0	0	0	multi-exon	FALSE	canonical	3	305	junction_3	20.9609160105182	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTGGGCAGAATATCTT	-7	True	NA	10	True	AATAAA	-17	NA	100200810	100224424	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_100200920_100204939_100205058_100205675_100205745_100207662_100207787_100210072_100210209_100210294_100210352_100212255_100212355_100212449_100212529_100218414_100218587_100220007_100220147_100223785
H1_mix_00018444	chr12	+	5590	18	NIC	ENSG00000136021.19	novel	5977	18	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	114	junction_1	14.1245081367036	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCCATATTAAGTTGTGA	-18	True	NA	14	True	AATAAA	-18	NA	100267167	100341715	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_100267397_100282942_100283148_100291502_100291661_100298030_100298176_100311043_100311194_100312431_100312654_100313421_100313539_100314488_100314615_100315557_100315735_100317802_100317926_100323524_100323639_100326621_100326755_100329200_100329320_100334165_100334267_100335624_100335692_100335810_100335907_100337386_100337507_100338527
H1_mix_00018446	chr12	+	6285	18	FSM	ENSG00000136021.19	ENST00000360820.7	5977	18	298	-606	226	606	multi-exon	FALSE	canonical	3	39	junction_1	26.9983980045055	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAGTAATTCAGCCC	31	False	NA	NA	False	NA	NA	NA	100267474	100342321	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_100267793_100282942_100283148_100291502_100291661_100298030_100298176_100311043_100311194_100312431_100312654_100313421_100313539_100314488_100314615_100315557_100315735_100317802_100317926_100323524_100323639_100326621_100326755_100329200_100329320_100334165_100334267_100335624_100335692_100335810_100335907_100337386_100337507_100338527
H1_mix_00018448	chr12	+	5193	12	NIC	ENSG00000139354.11	novel	5736	10	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_2	11.7768508046945	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAAGGTCTCAGTTTGCT	-7	True	NA	10	True	ATTAAA	-14	NA	100573676	100628286	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_100573786_100591735_100591857_100592373_100592450_100594874_100594923_100600381_100600551_100601637_100601754_100611999_100612142_100617743_100617808_100618448_100618588_100622274_100622383_100623561_100626865_100627488
H1_mix_00018449	chr12	+	5750	10	FSM	ENSG00000139354.11	ENST00000547754.6	5736	10	-14	0	-13	0	multi-exon	TRUE	canonical	2	3	junction_2	13.4421485642992	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGTCTCAGTTTGCTTT	-14	True	NA	12	True	ATTAAA	-16	NA	100573669	100628288	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_100573786_100591735_100591857_100594874_100594923_100600381_100600551_100601637_100601754_100611999_100612142_100617743_100617808_100618448_100618588_100622274_100622383_100623561
H1_mix_00018451	chr12	+	1592	9	FSM	ENSG00000111666.11	ENST00000229266.8	1572	9	-20	0	-20	0	multi-exon	FALSE	canonical	3	237	junction_8	24.6373699895098	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTATTTTTTCAATTTCA	102	False	NA	16	True	AATAAA	-22	NA	101697619	101729074	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_101698135_101714089_101714238_101714503_101714646_101716727_101716813_101720122_101720255_101723167_101723327_101723721_101723848_101726293_101726405_101728900
H1_mix_00018452	chr12	+	2001	8	FSM	ENSG00000111666.11	ENST00000549872.5	2001	8	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_6	24.324339032906	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATACGAATCTTTATACTGA	6	True	NA	NA	False	AATAAA	-45	NA	101697671	101727039	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_101698135_101714089_101714238_101714503_101714646_101716727_101716813_101720122_101720255_101723167_101723327_101723721_101723848_101726293
H1_mix_00018456	chr12	+	3080	11	FSM	ENSG00000185480.12	ENST00000327680.7	3076	11	-4	0	-4	0	multi-exon	FALSE	canonical	3	141	junction_9	118.166661965209	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGAAACTTTATTTTCC	-17	True	NA	12	True	AATAAA	-23	NA	102120178	102197520	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_102120287_102123885_102124042_102148229_102148464_102153868_102153977_102164437_102164609_102165728_102165884_102175482_102175667_102178591_102178771_102182548_102182628_102195311_102195448_102195950
H1_mix_00018457	chr12	+	928	4	ISM	ENSG00000185480.12	ENST00000541394.5	2452	12	7	44655	-3	0	5prime_fragment	FALSE	canonical	3	25	junction_3	209.415588934752	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTGCATCTCCTGCTTT	-4	True	NA	NA	False	AATACA	-23	NA	102120191	102152012	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_102120287_102123885_102124042_102148229_102148464_102151569
H1_mix_00018458	chr12	+	976	3	FSM	ENSG00000185480.12	ENST00000537257.5	976	3	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_2	44.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGTTTTGTCTACGTTA	-5	True	NA	NA	False	ATTAAA	-20	NA	102120244	102149007	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_102120287_102123885_102124042_102148229
H1_mix_00018460	chr12	+	2501	7	NIC	ENSG00000185480.12	novel	3076	11	NA	NA	-3	0	intron_retention	FALSE	canonical	3	70	junction_6	134.67790794666	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGAAACTTTATTTTCC	-16	True	NA	12	True	AATAAA	-23	NA	102120179	102197520	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_102120287_102123885_102124042_102148229_102148464_102153868_102153977_102164437_102164609_102165728_102165884_102195950
H1_mix_00018463	chr12	+	2836	9	NIC	ENSG00000185480.12	novel	3076	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	140	junction_8	98.3112881362054	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGAAACTTTATTTTCC	3503	False	NA	12	True	AATAAA	-23	NA	102123885	102197520	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_102124042_102148229_102148464_102153868_102153977_102164437_102164609_102165728_102165884_102175482_102175667_102178591_102178771_102182548_102182628_102195950
H1_mix_00018467	chr12	+	3266	17	FSM	ENSG00000166598.16	ENST00000680281.1	3248	17	-17	-1	9	1	multi-exon	FALSE	canonical	3	4394	junction_7	654.688749998807	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTCAGTGTCTTGACTGT	803	False	NA	10	True	AATAAA	-12	NA	103930340	103947923	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_103930565_103931520_103931624_103932276_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
H1_mix_00018469	chr12	+	3203	18	FSM	ENSG00000166598.16	ENST00000680391.1	3184	18	-19	0	0	0	multi-exon	FALSE	canonical	3	28	junction_13	1444.72008759063	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAGTGACTCAGGCTTA	794	False	NA	102	True	NA	NA	NA	103930331	103948015	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_103930565_103931520_103931624_103932276_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943574_103943737_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
H1_mix_00018470	chr12	+	2782	18	FSM	ENSG00000166598.16	ENST00000299767.10	2782	18	0	0	0	0	multi-exon	FALSE	canonical	3	4394	junction_7	637.02192604027	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGTCTTGACTGTCTT	13	True	NA	13	True	AATAAA	-15	NA	103930409	103947926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_103930565_103931520_103931624_103932276_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943320_103943737_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
H1_mix_00018471	chr12	+	2798	18	FSM	ENSG00000284503.1_ENSG00000166598.16	ENST00000680316.1	2646	18	-162	10	0	0	multi-exon	FALSE	canonical	3	106	junction_1	1425.28877423679	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATCCCAAATACTCAGT	2	False	NA	-1	True	AATAAA	-1	NA	103930437	103947912	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_103930623_103931520_103931624_103932276_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943320_103943737_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
H1_mix_00018472	chr12	+	3032	17	FSM	ENSG00000166598.16	ENST00000548462.5	3032	17	0	0	0	0	multi-exon	FALSE	canonical	3	4394	junction_7	656.308684876065	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGTCTTGACTGTCTTG	2	False	NA	14	True	AATAAA	-16	NA	103930437	103947927	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_103930565_103931520_103931624_103932276_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103943320_103943737_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
H1_mix_00018474	chr12	+	2975	9	FSM	ENSG00000139372.15	ENST00000544861.5	1387	9	92	-1680	34	0	multi-exon	FALSE	canonical	3	39	junction_1	155.69682077679	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACGGGCTTTTTCTATAG	49	False	NA	17	True	AATAAA	-26	NA	103965936	103988874	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_103966061_103979830_103980073_103980892_103980963_103982798_103982935_103983135_103983219_103983294_103983390_103984748_103984921_103985602_103985729_103986947
H1_mix_00018482	chr12	+	3570	14	NIC	ENSG00000198431.17	novel	3974	15	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	93	junction_1	132.224258129399	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCACGTGTGCCTTCTTAC	231	False	NA	13	True	ATTAAA	-20	NA	104286937	104350283	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_104287110_104311289_104311413_104313244_104313318_104315776_104315897_104318912_104319056_104319469_104319586_104321090_104321317_104325336_104325430_104326346_104326424_104327514_104327672_104331533_104331642_104334236_104334333_104339138_104339274_104348352
H1_mix_00018483	chr12	+	3974	15	FSM	ENSG00000198431.17	ENST00000526691.5	3974	15	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	139.318549243327	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCACGTGTGCCTTCTTAC	174	False	NA	13	True	ATTAAA	-20	NA	104286880	104350283	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_104287347_104288930_104289041_104311289_104311413_104313244_104313318_104315776_104315897_104318912_104319056_104319469_104319586_104321090_104321317_104325336_104325430_104326346_104326424_104327514_104327672_104331533_104331642_104334236_104334333_104339138_104339274_104348352
H1_mix_00018484	chr12	+	4054	14	NIC	ENSG00000198431.17	novel	3974	15	NA	NA	31	-2	combination_of_known_splicesites	FALSE	canonical	3	23	junction_1	150.096812938976	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATGGTCTTGGGAGTCT	6	False	NA	35	True	ATTAAA	-42	NA	104286712	104350305	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_104287347_104311289_104311413_104313244_104313318_104315776_104315897_104318912_104319056_104319469_104319586_104321090_104321317_104325336_104325430_104326346_104326424_104327514_104327672_104331533_104331642_104334236_104334333_104339138_104339274_104348352
H1_mix_00018492	chr12	+	1325	6	FSM	ENSG00000235162.9	ENST00000443585.6	1311	6	-17	3	0	-2	multi-exon	FALSE	canonical	3	598	junction_5	35.4570162309239	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTACATTTCTTAATTA	-26	True	NA	9	True	ATTAAA	-17	NA	105330673	105371515	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_105330938_105348601_105348627_105365806_105365843_105366616_105366697_105367471_105367510_105370633
H1_mix_00018498	chr12	+	1125	3	ISM	ENSG00000111785.21	ENST00000470628.2	2134	9	-125	55942	0	597	5prime_fragment	FALSE	canonical	3	203	junction_2	14.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCTCTCTTTTTAAGAG	31	False	NA	23	True	AATATA	-16	NA	106774620	106815563	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_106774830_106783996_106784045_106814695
H1_mix_00018501	chr12	+	5048	10	FSM	ENSG00000111785.21	ENST00000392837.9	5048	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_9	58.1984684368503	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTATATGATATTCCATT	4	True	NA	5	True	AATAAA	-18	NA	106774681	106889316	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_106774830_106783996_106784045_106814695_106815305_106825725_106825821_106842588_106842818_106843851_106843948_106851449_106851595_106860267_106860413_106870822_106870943_106885903
H1_mix_00018504	chr12	+	3228	4	FSM	ENSG00000151135.10	ENST00000280756.9	3228	4	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	21.013223349966	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGATCTTACCATTTTTAG	-4	True	NA	10	True	AATAAA	-17	NA	106955906	106974035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_106956066_106957081_106957150_106967110_106967181_106971104
H1_mix_00018512	chr12	+	1349	5	FSM	ENSG00000136003.16	ENST00000535729.5	1330	5	-19	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	568.710548082238	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCCCAGTTCTATAGAAGA	-22	True	NA	NA	False	AAGAAA	-9	NA	108562581	108568547	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_108562737_108564278_108564393_108565320_108565432_108567189_108567269_108567657
H1_mix_00018513	chr12	+	997	5	FSM	ENSG00000136003.16	ENST00000311893.14	983	5	-14	0	0	0	multi-exon	FALSE	canonical	3	1242	junction_1	86.2699252346958	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTCTCTAGTAAGCCT	-22	True	NA	11	True	AATAAA	-15	NA	108562581	108569368	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_108562737_108564278_108564393_108565320_108565432_108567189_108567269_108568830
H1_mix_00018514	chr12	+	3685	4	FSM	ENSG00000136003.16	ENST00000545932.5	3685	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	635.925222717961	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAATAAAATAATGG	-22	True	NA	-16	True	CATAAA	-28	NA	108562581	108569341	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_108564393_108565320_108565432_108567189_108567269_108567657
H1_mix_00018516	chr12	+	476	5	FSM	ENSG00000135093.13	ENST00000536393.5	476	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	21.1719153597401	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTAGCTGTTTTCCATTG	44	False	NA	NA	False	NA	NA	NA	109052641	109072347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_109052762_109056681_109056792_109067523_109067628_109071611_109071711_109072304
H1_mix_00018518	chr12	+	2106	6	FSM	ENSG00000076248.11	ENST00000336865.6	2130	6	24	0	-6	0	multi-exon	FALSE	canonical	3	928	junction_5	54.2202914046024	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTTGTTAAAAGTTTGT	428	False	NA	5	True	NA	NA	NA	109098141	109110975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_109098639_109099188_109099285_109101901_109102000_109102838_109102928_109103432_109103612_109109828
H1_mix_00018520	chr12	+	8849	52	NIC	ENSG00000076555.16	novel	3654	26	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	2	6	junction_25	5.12744160760962	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGCCTTGACTTTATTA	-3	True	NA	20	True	AATAAA	-20	NA	109154681	109268228	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_109154941_109166860_109166994_109167895_109168035_109171804_109171915_109172274_109172357_109174131_109174231_109175930_109176041_109176152_109176264_109179087_109179298_109179916_109180088_109185578_109185741_109187998_109188163_109191612_109191764_109191846_109191951_109193647_109193730_109197007_109197154_109199401_109199553_109201566_109201702_109206709_109206857_109209164_109209354_109212835_109212937_109216617_109216707_109216795_109216921_109222506_109222621_109222798_109222913_109223814_109223905_109227370_109227490_109232668_109232807_109233747_109233848_109233937_109234046_109235312_109235370_109235605_109235648_109237164_109237381_109239829_109239986_109241077_109241282_109242436_109242593_109245625_109245749_109246178_109246449_109247605_109247704_109249983_109250105_109252045_109252157_109253014_109253159_109254213_109254335_109256139_109256237_109258267_109258365_109258972_109259109_109260479_109260658_109262356_109262470_109264231_109264387_109265109_109265281_109265388_109265526_109266235
H1_mix_00018521	chr12	+	959	4	FSM	ENSG00000076555.16	ENST00000536440.2	959	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	6.18241233033047	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTATACTTAATGTCTG	NA	False	NA	NA	False	ATTAAA	-20	NA	109245713	109252578	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_109245749_109246178_109246449_109249983_109250105_109252045
H1_mix_00018523	chr12	+	5954	28	FSM	ENSG00000151148.14	ENST00000342494.8	5730	28	-224	0	8	0	multi-exon	FALSE	canonical	3	59	junction_15	46.2551817436104	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCTGCGTTCTGCATT	15	True	NA	14	True	ATTAAA	-17	NA	109477409	109536702	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_109478110_109481636_109481743_109483530_109483713_109483860_109483982_109486011_109486072_109486470_109486576_109488571_109488669_109489918_109490005_109491044_109491128_109497817_109497924_109498232_109498354_109499632_109499811_109501370_109501535_109503022_109503191_109507563_109507736_109509595_109509715_109510343_109510459_109511203_109511304_109516764_109516885_109521147_109521325_109521440_109521552_109523977_109524116_109524437_109524504_109526357_109526417_109529889_109530073_109530546_109530659_109533465_109533559_109534590
H1_mix_00018525	chr12	+	1127	9	FSM	ENSG00000151148.14	ENST00000536398.5	1120	9	-7	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	43.9651850900232	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTAGAGAAAGAGTGGTA	-7	True	NA	7	True	ATTAAA	-17	NA	109477627	109490722	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_109477765_109481636_109481743_109483530_109483713_109483860_109483982_109486011_109486072_109486470_109486576_109488571_109488669_109489918_109490005_109490489
H1_mix_00018528	chr12	+	2736	11	FSM	ENSG00000110921.14	ENST00000228510.8	2833	11	-16	113	-15	-105	multi-exon	FALSE	canonical	3	79	junction_1	17.8672885463911	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCCCAGCTTAACTTGTA	-25	True	NA	NA	False	NA	NA	NA	109573777	109598012	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_109573874_109574808_109574901_109575997_109576146_109579801_109579947_109581394_109581551_109586021_109586126_109586753_109586800_109590770_109590862_109591240_109591358_109595027_109595182_109596425
H1_mix_00018529	chr12	+	1659	9	FSM	ENSG00000110921.14	ENST00000447878.6	1644	9	-15	0	-15	0	multi-exon	FALSE	canonical	3	13	junction_3	35.3579906103274	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGGAATAAAAAGATTTTGT	-25	True	NA	-11	True	NA	NA	NA	109573777	109597236	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_109573874_109574808_109574901_109575997_109576146_109586021_109586126_109586753_109586800_109590770_109590862_109591240_109591358_109595027_109595182_109596425
H1_mix_00018536	chr12	+	4241	15	FSM	ENSG00000076513.17	ENST00000261739.9	4241	15	0	0	0	0	multi-exon	TRUE	canonical	3	78	junction_8	10.0541899073907	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTTCCTAGAAGTCCAGA	-3	True	NA	NA	False	NA	NA	NA	109999429	110039763	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_109999785_110012004_110012138_110013124_110013250_110016387_110016434_110018344_110018489_110019138_110019329_110024045_110024113_110025741_110025824_110027704_110027767_110028511_110028643_110029477_110029636_110030644_110030759_110033796_110033958_110036260_110036329_110037358
H1_mix_00018541	chr12	+	2710	19	FSM	ENSG00000122970.16	ENST00000552912.5	2710	19	0	0	0	0	multi-exon	FALSE	canonical	2	87	junction_1	31.2471727116092	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATCTATTTAAAAAATGTA	-28	True	NA	1	True	AATAAA	-16	NA	110124334	110218775	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_110124444_110127359_110127525_110128045_110128150_110128949_110129131_110132546_110132637_110134947_110135014_110135326_110135438_110136775_110136861_110143381_110143546_110146952_110147049_110162918_110163066_110180421_110180572_110190919_110191049_110192616_110192707_110203863_110203951_110205442_110205515_110205594_110205681_110209170_110209217_110218043
H1_mix_00018543	chr12	+	529	5	FSM	ENSG00000174437.18	ENST00000552636.2	529	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	211.210055395097	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGTGATATTGTAGAAAT	124	False	NA	NA	False	ATTAAA	-16	NA	110280755	110296712	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_110280965_110282603_110282622_110282712_110282796_110292019_110292125_110296598
H1_mix_00018544	chr12	+	4402	21	FSM	ENSG00000174437.18	ENST00000308664.10	4453	21	51	0	51	0	multi-exon	FALSE	canonical	2	30	junction_20	116.224556355359	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTCAGTGTGGTGGTG	535	False	NA	NA	False	AATAAA	-14	NA	110281166	110351090	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_110281908_110282603_110282622_110282712_110282796_110292019_110292125_110296598_110296738_110322991_110323073_110326389_110326476_110327552_110328018_110332596_110332686_110333180_110333284_110334011_110334144_110339280_110339404_110339502_110339722_110340658_110340995_110342227_110342449_110343231_110343435_110344885_110344972_110345248_110345383_110346000_110346119_110346200_110346322_110350291
H1_mix_00018545	chr12	+	8358	20	FSM	ENSG00000174437.18	ENST00000539276.7	8295	20	-66	3	65	0	multi-exon	FALSE	canonical	2	328	junction_12	52.6521538731249	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTCAGTGTGGTGGTG	549	False	NA	NA	False	AATAAA	-14	NA	110281180	110351090	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_110281908_110282603_110282622_110282712_110282796_110292019_110292125_110296598_110296738_110322991_110323073_110326389_110326476_110327552_110328018_110332596_110332686_110333180_110333284_110334011_110334144_110339280_110339404_110339502_110339722_110340658_110340995_110342227_110342449_110343231_110343435_110344885_110344972_110345248_110345383_110346000_110346119_110346200
H1_mix_00018553	chr12	+	1689	13	FSM	ENSG00000204852.17	ENST00000614115.5	1688	13	-1	0	-1	0	multi-exon	TRUE	canonical	0	0	junction_10	24.9113706746315	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGAGGAAACTACGCC	-22	True	NA	NA	False	NA	NA	NA	110614111	110647893	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_110614403_110619835_110619957_110626361_110626493_110628766_110628919_110632471_110632560_110634669_110634780_110636480_110636502_110640382_110640518_110641023_110641150_110641541_110641628_110644972_110645130_110647210_110647337_110647748
H1_mix_00018558	chr12	+	1351	2	FSM	ENSG00000185847.9	ENST00000666099.2	1323	2	-28	0	-19	0	multi-exon	FALSE	canonical	3	17	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTATCATGTTACACGTT	4	True	NA	NA	False	AATAAA	-16	NA	110936554	110939496	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_110936699_110938289
H1_mix_00018559	chr12	+	3668	3	FSM	ENSG00000185847.9	ENST00000553177.6	1416	3	-23	-2229	-19	2229	multi-exon	FALSE	canonical	2	2	junction_2	7.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCTTGATTTTTTCCTC	4	True	NA	5	True	AATAAA	-14	NA	110936554	110961322	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_110936699_110938289_110938513_110958021
H1_mix_00018564	chr12	+	2906	13	FSM	ENSG00000111271.15	ENST00000549590.5	2888	13	-18	0	0	0	multi-exon	FALSE	canonical	3	55	junction_11	14.7561192579741	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAGCGATTCTCCTGCCT	-25	True	NA	NA	False	NA	NA	NA	111686052	111745634	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_111686240_111692696_111692897_111702161_111702311_111705737_111705933_111709525_111709685_111712497_111712658_111715820_111715963_111721670_111721740_111727961_111728144_111729805_111729957_111733922_111734069_111736830_111737005_111744642
H1_mix_00018566	chr12	+	3891	21	NIC	ENSG00000111271.15	novel	4006	21	NA	NA	6	0	intron_retention	FALSE	canonical	2	6	junction_18	26.2230814360174	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGGACTTTCTGTGTCA	10	True	NA	14	True	AGTAAA	-15	NA	111686087	111757099	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_111686240_111692696_111692897_111702161_111702311_111705737_111705933_111709525_111709685_111712497_111712658_111715820_111715963_111721670_111721740_111727961_111728144_111729805_111729957_111733922_111734069_111736830_111737005_111744642_111745044_111746143_111746285_111747048_111747187_111747294_111747386_111748316_111748476_111749010_111749104_111753771_111753916_111755667_111755746_111756332
H1_mix_00018577	chr12	+	1623	3	FSM	ENSG00000089248.7	ENST00000261735.4	1623	3	0	0	0	0	multi-exon	FALSE	canonical	3	1769	junction_2	104	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACATCTTTTCTTCAGAC	-14	True	NA	NA	False	AATAAA	-44	NA	112013425	112023449	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_112013610_112019755_112019895_112022149
H1_mix_00018580	chr12	+	3197	12	FSM	ENSG00000135148.12	ENST00000257604.9	3178	12	-19	0	-12	0	multi-exon	FALSE	canonical	3	19	junction_1	83.1972663250839	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCAGTCTTGTGGTTCCT	3	True	NA	14	True	AATAAA	-18	NA	112125525	112153603	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_112126150_112130510_112130570_112134737_112134874_112135012_112135067_112140818_112141225_112142088_112142296_112145585_112145663_112148073_112148305_112149750_112149872_112151800_112152141_112152426_112152500_112152734
H1_mix_00018583	chr12	+	6073	16	FSM	ENSG00000179295.19	ENST00000351677.7	6073	16	0	0	0	0	multi-exon	FALSE	canonical	3	634	junction_6	68.2894493233683	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCGTTTGCTTCATCAG	5	True	NA	4	True	AATAAA	-23	NA	112418946	112509918	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_112419126_112446275_112446399_112450317_112450513_112453194_112453388_112454563_112454681_112455949_112456064_112472943_112473041_112477650_112477731_112477856_112478016_112482073_112482206_112486474_112486630_112488442_112488511_112489023_112489176_112502143_112502257_112504694_112504797_112505824
H1_mix_00018591	chr12	+	1858	4	FSM	ENSG00000139405.16	ENST00000548278.2	1858	4	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_2	17.6131264181639	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGTCACTTTTTTTCCC	2	True	NA	22	True	AATAGA	-18	NA	113185720	113192368	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_113186022_113186184_113186317_113186682_113187049_113191309
H1_mix_00018594	chr12	+	5270	28	FSM	ENSG00000186815.13	ENST00000335509.11	5248	28	-22	0	4	0	multi-exon	TRUE	canonical	3	33	junction_1	13.6119047387676	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTGCTGCCTCTTGAC	NA	False	NA	17	True	ACTAAA	-20	NA	113221441	113298585	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_113221627_113226727_113226965_113260367_113260493_113266179_113266357_113267842_113267957_113268741_113268873_113269756_113269846_113272657_113272693_113273231_113273291_113273568_113273669_113276918_113277036_113277239_113277365_113278188_113278238_113278771_113278836_113280150_113280196_113284580_113284638_113284717_113284772_113285888_113285962_113286986_113287095_113288162_113288235_113288757_113288848_113290127_113290244_113290951_113290999_113291608_113291678_113291873_113291959_113292933_113293074_113293268_113293350_113295959
H1_mix_00018599	chr12	+	2975	16	FSM	ENSG00000186815.13	ENST00000551127.5	2975	16	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_13	9.48308435525536	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCGATGTACGGAACTGC	NA	False	NA	6	True	NA	NA	NA	113277002	113296128	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_113277036_113277239_113277365_113278188_113278238_113278771_113278836_113280150_113280196_113284580_113284638_113284717_113284772_113285888_113285962_113286986_113287095_113288162_113288848_113290127_113290244_113290951_113290999_113291608_113291678_113291873_113293074_113293268_113293350_113295959
H1_mix_00018605	chr12	+	265	1	FSM	ENSG00000257979.1	ENST00000553000.1	214	1	-73	22	-73	-22	mono-exon	FALSE	NA	NA	NA	NA	NA	514	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCATATTAGAAGTCTAGG	NA	False	NA	NA	False	AATACA	-13	NA	116168971	116169236	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_116169000_116169200
H1_mix_00018615	chr12	+	959	1	FSM	ENSG00000240342.3	ENST00000488803.1	879	1	-23	-57	-23	57	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTTATACCAGAATATAT	1	True	NA	NA	False	AATAAA	-32	NA	118246060	118247019	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_118246100_118247000
H1_mix_00018620	chr12	+	453	1	FSM	ENSG00000213144.2	ENST00000392530.2	545	1	77	15	77	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTGTATAAGTAACCGCG	948	False	NA	NA	False	NA	NA	NA	119194926	119195379	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_119194900_119195400
H1_mix_00018625	chr12	+	4245	2	FSM	ENSG00000111725.11	ENST00000542698.1	4019	2	-226	0	-226	0	multi-exon	FALSE	canonical	3	311	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGACATGTGCCTGGAGGA	515	False	NA	15	True	AATAAA	-16	NA	119677128	119681619	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_119680002_119680247
H1_mix_00018629	chr12	+	538	3	FSM	ENSG00000135127.12	ENST00000546790.1	555	3	16	1	16	-1	multi-exon	FALSE	canonical	3	21	junction_2	28	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAGGGATGGCTTCAC	59	False	NA	NA	False	NA	NA	NA	120064652	120081017	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_120064880_120071621_120071802_120080886
H1_mix_00018631	chr12	+	2642	1	FSM	ENSG00000277283.1	ENST00000611079.1	2094	1	-552	4	-552	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTCCTGACTTTGCCTGC	NA	False	NA	10	True	AATAAA	-22	NA	120116354	120118996	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_120116400_120119000
H1_mix_00018636	chr12	+	1185	5	FSM	ENSG00000255857.7	ENST00000535200.2	1199	5	14	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	68.1432315054107	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCCAAGGGAGGCGGATC	3	True	NA	NA	False	NA	NA	NA	120201355	120213138	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_120201427_120206544_120206622_120209838_120209935_120210929_120211107_120212374
H1_mix_00018640	chr12	+	1219	4	FSM	ENSG00000089163.4	ENST00000202967.4	1217	4	-2	0	-2	0	multi-exon	TRUE	canonical	3	14	junction_2	0.816496580927726	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCATGAATTTGTGTGT	8615	False	NA	21	True	AATAAA	-24	NA	120302318	120313249	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_120302379_120303560_120304059_120312455_120312751_120312883
H1_mix_00018646	chr12	+	639	2	FSM	ENSG00000088986.11	ENST00000548214.1	616	2	-23	0	-23	0	multi-exon	FALSE	canonical	3	3163	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGCCGGGCCGGGAGGA	NA	False	NA	NA	False	NA	NA	NA	120496058	120496896	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_120496217_120496415
H1_mix_00018648	chr12	+	922	2	FSM	ENSG00000088986.11	ENST00000549989.1	719	2	-62	-141	-31	0	multi-exon	FALSE	canonical	3	3122	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATGTGTGTGAATTACAA	NA	False	NA	11	True	AATAAA	-14	NA	120496050	120498491	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_120496554_120498072
H1_mix_00018651	chr12	+	685	3	FSM	ENSG00000088986.11	ENST00000242577.11	663	3	-22	0	0	0	multi-exon	FALSE	canonical	3	3122	junction_2	20.5	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGTGTGAATTACAATT	5	True	NA	13	True	AATAAA	-16	NA	120496090	120498493	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_120496217_120496415_120496554_120498072
H1_mix_00018654	chr12	+	3373	17	FSM	ENSG00000022840.17	ENST00000413266.6	2671	17	0	-702	0	0	multi-exon	FALSE	canonical	3	112	junction_8	235.197921972113	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGAGCTTTTTGTTTTTT	-13	True	NA	49	True	AATAAA	-16	NA	120534811	120577588	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_120534969_120546404_120546602_120552498_120552699_120554717_120554809_120557281_120557467_120557545_120557683_120560725_120560887_120562944_120563071_120563331_120563624_120563809_120563944_120565071_120565190_120565427_120565530_120566824_120566981_120571190_120571292_120575630_120575689_120575791_120575951_120576589
H1_mix_00018663	chr12	+	1876	10	FSM	ENSG00000122971.9	ENST00000242592.9	1859	10	-17	0	-17	0	multi-exon	TRUE	canonical	3	60	junction_5	10.6458129484475	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTGTCCTCGCCCTCTC	-31	True	NA	16	True	AATAAA	-16	NA	120725808	120740008	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_120725932_120727025_120727190_120736985_120737136_120737355_120737468_120737836_120737989_120738279_120738451_120738532_120738671_120738819_120738916_120739139_120739197_120739295
H1_mix_00018675	chr12	+	3048	7	FSM	ENSG00000170633.17	ENST00000392465.7	2051	7	-64	-933	-28	929	multi-exon	FALSE	canonical	3	83	junction_2	190.189963516013	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCGACGAGCGAAACTCC	NA	False	NA	NA	False	NA	NA	NA	121400054	121425281	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_121400219_121402741_121402808_121416158_121416378_121417503_121417912_121420241_121420335_121420576_121420779_121423385
H1_mix_00018698	chr12	+	8390	17	FSM	ENSG00000175727.14	ENST00000319080.12	8390	17	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_14	26.5777162299547	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGATGTGTGGCCTTA	4	True	NA	7	True	AATAAA	-23	NA	122078755	122147344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_122079267_122127255_122127363_122127882_122127969_122129136_122129227_122129587_122129630_122129940_122130113_122130843_122130934_122132291_122132384_122133347_122133988_122135223_122135346_122135488_122135667_122137468_122137591_122138193_122138296_122138423_122138552_122138814_122138939_122140953_122141084_122141690
H1_mix_00018699	chr12	+	1996	9	ISM	ENSG00000175727.14	ENST00000319080.12	8390	17	11	13180	11	0	5prime_fragment	FALSE	canonical	3	93	junction_2	10.7004672795163	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCGTTTTCTATGCTCTAT	15	False	NA	28	True	AATACA	-14	NA	122078766	122134164	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_122079267_122127255_122127363_122127882_122127969_122129136_122129227_122129587_122129630_122129940_122130113_122130843_122130934_122132291_122132384_122133347
H1_mix_00018701	chr12	+	8636	9	FSM	ENSG00000175727.14	ENST00000538698.5	5097	9	-613	-2926	-613	0	multi-exon	FALSE	canonical	3	44	junction_6	6.9462219947249	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGATGTGTGGCCTTA	2303	False	NA	7	True	AATAAA	-23	NA	122131911	122147344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_122133988_122135223_122135346_122135488_122135667_122137468_122137591_122138193_122138296_122138423_122138552_122138814_122138939_122140953_122141084_122141690
H1_mix_00018704	chr12	+	6927	64	NIC	ENSG00000184445.12	novel	6974	64	NA	NA	-2	0	combination_of_known_junctions	TRUE	canonical	3	76	junction_15	81.9616358460889	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATAATTGCCCCATAAAGA	-5	True	NA	9	True	AATAAA	-14	NA	122527243	122626375	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_122527352_122530021_122530193_122534663_122534785_122538338_122538455_122539675_122539755_122542049_122542128_122543599_122543635_122544158_122544270_122546175_122546270_122546621_122546675_122547414_122547531_122547914_122547970_122549765_122549865_122551318_122551363_122551457_122551524_122551620_122551697_122557383_122557510_122557599_122557690_122561920_122561975_122562637_122562700_122568260_122568373_122569680_122569825_122570875_122570933_122571024_122571127_122572936_122573057_122573141_122573286_122574281_122574381_122575542_122575647_122575799_122575900_122576894_122577030_122577671_122577792_122579904_122579978_122580602_122580671_122582704_122582986_122584277_122584451_122584892_122584991_122585635_122585775_122586700_122586758_122587710_122587875_122588711_122588817_122590606_122590736_122591336_122591454_122594275_122594386_122597730_122597939_122601535_122601626_122602568_122602741_122602828_122602888_122603026_122603244_122604563_122604638_122604876_122605088_122605305_122605416_122609383_122609431_122610821_122610901_122613111_122613231_122613625_122613762_122614990_122615087_122615469_122615527_122618342_122618398_122618481_122618546_122620478_122620609_122621880_122621971_122622461_122622608_122624597_122624689_122626204
H1_mix_00018707	chr12	+	4714	21	ISM	ENSG00000184445.12	ENST00000333479.12	6974	64	69993	-1782	-1	1782	3prime_fragment	FALSE	canonical	3	232	junction_1	27.7983362811518	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAGGTGTTATACTGTT	4424	False	NA	-1	True	AATAAA	-13	NA	122597241	122628178	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_122597939_122601535_122601626_122602568_122602741_122602828_122602888_122603026_122603244_122604563_122604638_122604876_122605088_122605305_122605416_122609383_122609431_122610821_122610901_122613111_122613231_122613625_122613762_122614990_122615087_122615469_122615527_122618342_122618398_122618481_122618546_122620478_122620609_122621880_122621971_122622461_122622608_122624597_122624689_122626204
H1_mix_00018716	chr12	+	1233	7	FSM	ENSG00000130787.14	ENST00000536847.1	1233	7	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_2	14.2565774293833	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTGAGGGCTGCCCAGC	5048	False	NA	NA	False	NA	NA	NA	122853482	122856101	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_122854184_122854904_122854963_122855052_122855129_122855264_122855406_122855550_122855613_122855830_122855904_122855979
H1_mix_00018721	chr12	+	1488	7	FSM	ENSG00000111325.16	ENST00000454694.6	1488	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	45.0582955736233	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAGCCTCCAGAGAGCAC	230	False	NA	NA	False	NA	NA	NA	122974970	122979762	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_122975122_122975810_122975868_122976653_122976768_122976870_122976971_122978441_122978570_122978752_122979011_122979082
H1_mix_00018722	chr12	+	1788	7	FSM	ENSG00000111325.16	ENST00000228922.11	1780	7	-8	0	-8	0	multi-exon	FALSE	canonical	3	91	junction_1	28.9678941051794	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCCTTTGTGTTTGCGGCT	-16	True	NA	13	True	TATAAA	-13	NA	122975211	122980041	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_122975384_122975810_122975868_122976653_122976768_122976870_122976971_122978441_122978570_122978752_122979011_122979082
H1_mix_00018723	chr12	+	1591	6	FSM	ENSG00000182196.14	ENST00000543566.6	1591	6	0	0	0	0	multi-exon	FALSE	canonical	3	657	junction_2	422.956924520689	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTCTGTGGCTTTTTGT	4832	False	NA	21	True	ATTAAA	-21	NA	122980059	122982913	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_122980746_122981128_122981267_122981594_122981880_122981956_122982075_122982468_122982539_122982619
H1_mix_00018724	chr12	+	1131	4	FSM	ENSG00000182196.14	ENST00000542099.5	1119	4	-12	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	615.656469866832	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGGGAGCTTTCGGCCTG	4951	False	NA	NA	False	NA	NA	NA	122980178	122982073	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_122980746_122981128_122981267_122981570_122981880_122981956
H1_mix_00018725	chr12	+	1351	5	FSM	ENSG00000182196.14	ENST00000392435.7	1339	5	-12	0	0	0	multi-exon	FALSE	canonical	3	657	junction_2	438.149161245346	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCCCAGCCTGGGCAGGT	4951	False	NA	NA	False	NA	NA	NA	122980178	122982711	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_122980746_122981128_122981267_122981594_122981880_122981956_122982075_122982468
H1_mix_00018726	chr12	+	1501	6	FSM	ENSG00000182196.14	ENST00000453766.7	1491	6	-10	0	0	0	multi-exon	FALSE	canonical	3	582	junction_2	444.630813147267	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTTCTGTGGCTTT	4951	False	NA	17	True	ATTAAA	-17	NA	122980178	122982909	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_122980746_122981128_122981300_122981594_122981880_122981956_122982075_122982468_122982539_122982619
H1_mix_00018727	chr12	+	799	5	FSM	ENSG00000182196.14	ENST00000413381.6	799	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	674.830534282497	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGTGTGGCCCCTCTGCC	-33	True	NA	NA	False	NA	NA	NA	122980230	122982538	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_122980386_122981128_122981300_122981594_122981880_122981956_122982075_122982468
H1_mix_00018728	chr12	+	910	6	FSM	ENSG00000182196.14	ENST00000426960.6	910	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	640.329727562293	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCCAGTCTCTTCTCA	-1	True	NA	-97	True	NA	NA	NA	122980262	122982795	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_122980386_122981128_122981267_122981594_122981880_122981956_122982075_122982468_122982539_122982619
H1_mix_00018730	chr12	+	1023	6	FSM	ENSG00000182196.14	ENST00000315580.10	1023	6	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_2	581.252096770412	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTTCTGTGGCTTT	-19	True	NA	17	True	ATTAAA	-17	NA	122980680	122982909	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_122980746_122981128_122981300_122981570_122981880_122981956_122982075_122982468_122982539_122982619
H1_mix_00018731	chr12	+	1278	5	FSM	ENSG00000182196.14	ENST00000536502.5	1273	5	-5	0	0	0	multi-exon	FALSE	canonical	3	657	junction_1	407.622987575529	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCACTTCTCAGCTATTAAA	16	True	NA	-19	True	NA	NA	NA	122980715	122982873	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_122981267_122981594_122981880_122981956_122982075_122982468_122982539_122982619
H1_mix_00018732	chr12	+	1103	6	NIC	ENSG00000182196.14	novel	1491	6	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	652.540573451184	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTCTGTTCTGTGGCTT	18	True	NA	16	True	ATTAAA	-16	NA	122980717	122982908	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_122980888_122981128_122981300_122981594_122981880_122981956_122982075_122982468_122982539_122982619
H1_mix_00018733	chr12	+	947	6	NIC	ENSG00000182196.14	novel	1318	6	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_2	614.820494128164	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTCTGTTCTGTGGCTT	23	True	NA	16	True	ATTAAA	-16	NA	122980722	122982908	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_122980746_122981128_122981267_122981570_122981880_122981956_122982075_122982468_122982539_122982619
H1_mix_00018734	chr12	+	1052	6	NIC	ENSG00000182196.14	novel	1023	6	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	158	junction_2	665.636116808576	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTCTGTTCTGTGGCTT	18	True	NA	16	True	ATTAAA	-16	NA	122980717	122982908	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_122980813_122981128_122981300_122981570_122981880_122981956_122982075_122982468_122982539_122982619
H1_mix_00018738	chr12	+	1554	3	FSM	ENSG00000130921.9	ENST00000253233.6	1554	3	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_2	18.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGGAGTCAAACATTAAT	-25	True	NA	37	True	AATAAA	-45	NA	123233435	123257960	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_123233532_123253646_123253957_123256812
H1_mix_00018739	chr12	+	2066	3	FSM	ENSG00000130921.9	ENST00000366329.7	2056	3	-10	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	54	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCCGGGCATGGTGGCTC	-25	True	NA	NA	False	AAAACA	-1	NA	123233435	123258079	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_123233925_123253646_123253957_123256812
H1_mix_00018741	chr12	+	444	2	FSM	ENSG00000256092.3	ENST00000543072.2	783	2	31	308	5	-3	multi-exon	FALSE	canonical	3	14	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAAAGTGCTGTTTGAC	-2	True	NA	26	True	AATAAA	-36	NA	123364952	123365805	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_123365116_123365524
H1_mix_00018742	chr12	+	3124	8	FSM	ENSG00000183955.14	ENST00000402868.8	2776	8	-348	0	-348	0	multi-exon	FALSE	canonical	3	32	junction_1	44.6117034155013	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCACGTGTGTGTCTTTCT	NA	False	NA	3	True	ATTAAA	-19	NA	123383783	123409353	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_123384209_123389432_123389555_123390629_123390787_123395046_123395267_123396344_123396433_123403572_123403633_123404883_123405075_123407492
H1_mix_00018743	chr12	+	2798	7	NIC	ENSG00000183955.14	novel	725	4	NA	NA	62	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	40.5941977244149	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCACGTGTGTGTCTTTCT	28	True	NA	3	True	ATTAAA	-19	NA	123388961	123409353	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_123389183_123390629_123390787_123395046_123395267_123396344_123396433_123403572_123403633_123404883_123405075_123407492
H1_mix_00018744	chr12	+	3701	7	ISM	ENSG00000183955.14	ENST00000402868.8	2776	8	4299	0	-469	0	3prime_fragment	FALSE	canonical	3	67	junction_1	30.1261237688046	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCACGTGTGTGTCTTTCT	4278	False	NA	3	True	ATTAAA	-19	NA	123388430	123409353	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_123389555_123390629_123390787_123395046_123395267_123396344_123396433_123403572_123403633_123404883_123405075_123407492
H1_mix_00018745	chr12	+	1492	2	FSM	ENSG00000184209.15	ENST00000526639.3	1477	2	-15	0	-3	0	multi-exon	FALSE	canonical	3	175	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGGCATTTGTAAGGAGC	-27	True	NA	NA	False	NA	NA	NA	123458123	123466936	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_123458217_123465537
H1_mix_00018752	chr12	+	802	7	FSM	ENSG00000111364.16	ENST00000540763.5	799	7	-3	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	130.331202028609	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCGCCTGGAAAACTACT	5	True	NA	NA	False	NA	NA	NA	123602124	123610103	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_123602257_123605864_123605982_123606072_123606160_123607431_123607524_123607603_123607663_123608679_123608830_123609938
H1_mix_00018768	chr12	+	4262	5	FSM	ENSG00000179195.16	ENST00000392404.7	4262	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	6.65206734782504	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGTGCTTGACATGTAG	-29	True	NA	16	True	AATAAA	-17	NA	123973211	124015426	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_123973304_123973885_123974021_123988045_123988139_124011380_124011442_124011545
H1_mix_00018770	chr12	+	4396	5	FSM	ENSG00000179195.16	ENST00000538932.6	4321	5	-92	17	0	0	multi-exon	FALSE	canonical	3	27	junction_2	11.1214882097676	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGTTCTGTGCTTGACAT	NA	False	NA	12	True	AATAAA	-13	NA	123973122	124015422	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_123973353_123973885_123974021_123988045_123988139_124011380_124011442_124011545
H1_mix_00018772	chr12	+	4229	5	NIC	ENSG00000179195.16	novel	4262	5	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	5.71729831301464	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGTGCTTGACATGTAG	7	True	NA	16	True	AATAAA	-17	NA	123973247	124015426	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_123973304_123973885_123974021_123988042_123988139_124011380_124011442_124011545
H1_mix_00018774	chr12	+	2492	3	FSM	ENSG00000178882.15	ENST00000546355.4	2487	3	-7	2	-7	0	multi-exon	FALSE	canonical	3	55	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGGGACTTCCTTTTCTGT	-7	True	NA	3	True	AATAAA	-13	NA	124295085	124316022	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_124295637_124311817_124311928_124314191
H1_mix_00018776	chr12	+	3257	18	FSM	ENSG00000081760.17	ENST00000316519.11	3256	18	-1	0	0	0	multi-exon	FALSE	canonical	3	149	junction_11	20.1494416796099	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATGCTGTGTGTGCAGTG	-5	True	NA	11	True	AATAAA	-23	NA	125065433	125143316	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_125065718_125073875_125073980_125076490_125076612_125086329_125086444_125091425_125091524_125102678_125102794_125102999_125103082_125107120_125107269_125114476_125114558_125118640_125118766_125124704_125124770_125124901_125125025_125128160_125128275_125129334_125129461_125134002_125134073_125134793_125134853_125136661_125136865_125142091
H1_mix_00018777	chr12	+	3043	17	NIC	ENSG00000081760.17	novel	3256	18	NA	NA	12	-1	combination_of_known_junctions	FALSE	canonical	3	35	junction_16	40.4204465586416	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTGTGTGTGCAGTGTG	8	True	NA	13	True	AATAAA	-25	NA	125065446	125143318	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_125065718_125073875_125073980_125076490_125076612_125086329_125086444_125091425_125091524_125102678_125102794_125102999_125103082_125107120_125107269_125114476_125114558_125118640_125118766_125124704_125124770_125124901_125125025_125128160_125128275_125129334_125129461_125134002_125134073_125134793_125134853_125142091
H1_mix_00018781	chr12	+	3355	4	FSM	ENSG00000139364.11	ENST00000534945.2	5787	4	0	2432	0	-2432	multi-exon	FALSE	canonical	3	76	junction_3	7.76029781788188	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGGCTTCAGTGTCAATG	NA	False	NA	10	True	ATTAAA	-18	NA	125349451	125585979	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_125350344_125415530_125415678_125519438_125519626_125583850
H1_mix_00018785	chr12	+	2687	9	NIC	ENSG00000151948.12	novel	2995	12	NA	NA	-23	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_3	29.1536875883652	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATACGAAAATAGCCTCT	45	True	NA	21	True	AATAAA	-15	NA	128853558	128984956	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_128853650_128888638_128888745_128899235_128899288_128926358_128926455_128927104_128927155_128945325_128945370_128947337_128947459_128957544_128957644_128982928
H1_mix_00018786	chr12	+	2851	10	NIC	ENSG00000151948.12	novel	3010	11	NA	NA	-23	-2	combination_of_known_splicesites	TRUE	canonical	1	1	junction_3	24.7206616236522	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGCCTCTCTTTCTTCCC	45	True	NA	31	True	AATAAA	-25	NA	128853558	128984966	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_128853650_128875913_128876063_128888638_128888745_128914932_128914990_128926358_128926455_128927104_128927155_128945325_128945370_128947337_128947459_128957544_128957644_128982928
H1_mix_00018788	chr12	+	3208	6	FSM	ENSG00000132341.12	ENST00000392369.6	1530	6	-283	-1395	-250	0	multi-exon	FALSE	canonical	3	12357	junction_4	317.994087995359	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTTGAATCATCTCTA	NA	False	NA	33	True	AATATA	-19	NA	130871786	130877676	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_130872630_130872835_130872921_130873002_130873129_130874545_130874734_130875611_130875783_130875881
H1_mix_00018789	chr12	+	2474	7	FSM	ENSG00000132341.12	ENST00000543796.6	2474	7	0	0	0	0	multi-exon	FALSE	canonical	3	9996	junction_1	1089.01270271134	1487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTGAATCATCTCTAGT	-5	True	NA	35	True	AATATA	-21	NA	130872065	130877678	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_130872127_130872583_130872630_130872835_130872921_130873002_130873129_130874545_130874734_130875611_130875783_130875881
H1_mix_00018790	chr12	+	1659	2	FSM	ENSG00000132341.12	ENST00000539498.1	1659	2	0	0	0	0	multi-exon	FALSE	canonical	3	12357	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACTTTGAAAAGCCCTTC	1032	False	NA	NA	False	TTTAAA	-32	NA	130873102	130875639	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_130874734_130875611
H1_mix_00018792	chr12	+	3255	18	FSM	ENSG00000061936.10	ENST00000261674.9	3246	18	-9	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	31.3726348038043	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCGTGGTTTCTTCCT	-7	True	NA	17	True	AATAAA	-29	NA	131711080	131799738	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_131711448_131714070_131714241_131714821_131714954_131719453_131719540_131725404_131725631_131726939_131727053_131728292_131728429_131753122_131753364_131754367_131754500_131755385_131755480_131756472_131756645_131764455_131764687_131766117_131766309_131778064_131778331_131786462_131786589_131797177_131797361_131799036_131799110_131799422
H1_mix_00018793	chr12	+	3018	17	NIC	ENSG00000061936.10	novel	3246	18	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_11	42.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCGTGGTTTCTTCCT	-1	True	NA	17	True	AATAAA	-29	NA	131711086	131799738	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_131711448_131714070_131714241_131714821_131714954_131719453_131719540_131725404_131725631_131726939_131727053_131728292_131728429_131753122_131753364_131754367_131754500_131755385_131755480_131756472_131756645_131766117_131766309_131778064_131778331_131786462_131786589_131797177_131797361_131799036_131799110_131799422
H1_mix_00018796	chr12	+	2273	10	FSM	ENSG00000198598.7	ENST00000535004.2	1870	10	1	-404	1	0	multi-exon	TRUE	canonical	3	82	junction_8	34.3277593461676	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGCGGCTCGGCTGGGCTC	-13	True	NA	23	True	NA	NA	NA	131828393	131851771	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_131828654_131838194_131838328_131838611_131838742_131840572_131840857_131841623_131841801_131843996_131844082_131845117_131845201_131845296_131845450_131849938_131850060_131850924
H1_mix_00018797	chr12	+	1466	7	NNC	ENSG00000198598.7	novel	1910	11	NA	NA	-2	-49	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_6	62.7950811944871	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTCTGTGTCGAGTCGTCT	-3	True	NA	NA	False	NA	NA	NA	131828403	131844672	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_131828654_131838194_131838328_131838611_131838742_131840572_131840857_131841623_131841801_131843996_131844082_131844265
H1_mix_00018799	chr12	+	2540	4	FSM	ENSG00000198598.7	ENST00000537848.5	711	4	-1080	-749	-1080	-4	multi-exon	FALSE	canonical	3	82	junction_2	42.4342628858646	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGGCTGGGCTCCCTGGTGC	NA	False	NA	31	True	NA	NA	NA	131843789	131851779	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_131845201_131845296_131845450_131849938_131850060_131850924
H1_mix_00018805	chr12	+	1617	6	FSM	ENSG00000177192.14	ENST00000443358.6	1664	6	47	0	5	0	multi-exon	FALSE	canonical	3	10	junction_1	67.3421116390034	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGGTTTGCCTTTTTCT	19	False	NA	39	True	ATTAAA	-25	NA	131929246	131943859	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_131929381_131929906_131930136_131932174_131932313_131939172_131939276_131941291_131941984_131943538
H1_mix_00018806	chr12	+	4053	6	FSM	ENSG00000177192.14	ENST00000376649.8	4041	6	-16	4	-16	-4	multi-exon	FALSE	canonical	3	108	junction_1	32.9448023214588	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGTTGCCTTTCATTCTC	-13	True	NA	1	True	AATAAA	-15	NA	131929259	131945892	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_131929797_131929906_131930136_131932174_131932313_131939172_131939276_131941291_131941984_131943538
H1_mix_00018807	chr12	+	1424	4	FSM	ENSG00000177192.14	ENST00000544213.5	687	4	-38	-699	-38	699	multi-exon	FALSE	canonical	3	14	junction_3	56.8584988272544	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTCCTTCAGAACCACAAG	278	False	NA	NA	False	GGGGCT	-14	NA	131929550	131933532	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_131929797_131929906_131930136_131932174_131932313_131932721
H1_mix_00018808	chr12	+	838	3	FSM	ENSG00000177192.14	ENST00000535067.5	838	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	57	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCCTTGGTTTGCCTTTTT	482	False	NA	37	True	ATTAAA	-23	NA	131929754	131943857	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_131930136_131932174_131932313_131943538
H1_mix_00018809	chr12	+	1378	2	FSM	ENSG00000177192.14	ENST00000543754.1	1378	2	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGGTTTGCCTTTTTCT	9397	False	NA	39	True	ATTAAA	-25	NA	131940926	131943859	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_131941984_131943538
H1_mix_00018812	chr12	+	12289	53	FSM	ENSG00000183495.14	ENST00000389561.7	12289	53	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_2	29.000478214788	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTCATTTTGTCTTTCA	-11	True	NA	10	True	AATAAA	-17	NA	131949941	132080460	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_131950037_131960584_131961955_131979693_131979794_131981488_131981597_131982092_131982479_131986513_131986808_131987704_131987891_131989963_131990105_131990635_131990715_131991406_131991457_131992172_131992231_131994866_131994957_132005076_132005185_132006111_132006303_132006699_132006878_132011497_132011635_132013008_132013179_132013489_132013665_132013776_132013914_132017534_132017722_132018209_132018377_132020048_132020219_132021078_132021322_132023776_132023942_132025645_132025805_132027436_132027532_132028016_132028289_132029700_132029904_132029988_132030159_132031952_132032150_132037681_132037794_132037952_132038097_132043303_132043463_132043644_132043729_132044176_132044312_132044670_132044716_132044799_132044954_132045318_132045561_132045726_132045901_132050322_132050460_132050598_132050656_132053145_132053225_132053342_132053598_132054973_132055020_132055098_132055209_132062109_132062324_132062465_132062702_132064667_132064887_132066773_132066970_132067361_132067487_132069494_132069642_132076515_132076594_132077400
H1_mix_00018817	chr12	+	1435	2	ISM	ENSG00000185684.16	ENST00000641289.3	2835	11	176	18279	176	0	5prime_fragment	FALSE	canonical	3	70	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTAGTTCTGTTAACTT	NA	False	NA	14	True	ATTAAA	-16	NA	132104196	132108898	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_132105305_132108571
H1_mix_00018819	chr12	+	1650	15	FSM	ENSG00000184967.7	ENST00000330579.6	1650	15	0	0	0	0	multi-exon	TRUE	canonical	3	355	junction_5	35.6974960535021	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGCTCAGGGAGTGTGG	6	True	NA	39	True	AATAAA	-14	NA	132144456	132152468	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_132144606_132144853_132144975_132145558_132145666_132147280_132147389_132147632_132147783_132147879_132147980_132148071_132148107_132148608_132148660_132148783_132148896_132150980_132151042_132151257_132151369_132151483_132151645_132151737_132151821_132152083_132152198_132152281
H1_mix_00018824	chr12	+	5552	20	FSM	ENSG00000112787.14	ENST00000650108.1	5556	20	0	4	0	-4	multi-exon	TRUE	canonical	3	20	junction_4	135.030211044554	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACTGTGGTCGCGTGTTC	187	False	NA	13	True	GATAAA	-19	NA	132489550	132585184	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_132490862_132508152_132508351_132525733_132525824_132527952_132527989_132548002_132548033_132567480_132567527_132569925_132570242_132570334_132570541_132571067_132571137_132571306_132571525_132572287_132572339_132572526_132572623_132574089_132574159_132574318_132574349_132574492_132574565_132576798_132576932_132581438_132581517_132581740_132581825_132582061_132582267_132582970
H1_mix_00018825	chr12	+	3928	19	NNC	ENSG00000112787.14	novel	4839	19	NA	NA	16	-892	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_4	127.378470281904	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTTTTTTGCCTTATT	-9	True	NA	16	True	ATTAAA	-17	NA	132490166	132584296	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_132490862_132508152_132508351_132525733_132525824_132527952_132527989_132548002_132548033_132567480_132567527_132569925_132570242_132570337_132570541_132571067_132571232_132572287_132572345_132572526_132572623_132574089_132574159_132574318_132574349_132574492_132574565_132576798_132576932_132581438_132581517_132581740_132581825_132582061_132582267_132582970
H1_mix_00018826	chr12	+	3434	16	NNC	ENSG00000112787.14	novel	1246	9	NA	NA	-153	-892	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_5	94.5109987720418	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTTTTTTGCCTTATT	NA	False	NA	16	True	ATTAAA	-17	NA	132559893	132584296	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_132560231_132567480_132567527_132569925_132570242_132570337_132570541_132571067_132571232_132571306_132571525_132572287_132572345_132572526_132572623_132574089_132574159_132574318_132574349_132574492_132574565_132576798_132576932_132581438_132581517_132581740_132581825_132582061_132582267_132582970
H1_mix_00018827	chr12	+	409	3	FSM	ENSG00000112787.14	ENST00000539264.5	409	3	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_1	20.5	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCCGCCCCGCACCGCCA	32	True	NA	NA	False	NA	NA	NA	132560046	132570104	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_132560231_132567480_132567527_132569925
H1_mix_00018828	chr12	+	3066	15	NIC	ENSG00000112787.14	novel	1246	9	NA	NA	0	-892	combination_of_known_junctions	FALSE	canonical	3	158	junction_5	58.4581221116136	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTTTTTTGCCTTATT	32	True	NA	16	True	ATTAAA	-17	NA	132560046	132584296	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_132560231_132567480_132567527_132569925_132570242_132570334_132570541_132571067_132571232_132572287_132572345_132572526_132572623_132574089_132574159_132574318_132574349_132574492_132574565_132576798_132576932_132581438_132581517_132581740_132581825_132582061_132582267_132582970
H1_mix_00018829	chr12	+	3080	16	NNC	ENSG00000112787.14	novel	1246	9	NA	NA	0	-892	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_5	89.5374781865114	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTTTTTTGCCTTATT	73	False	NA	16	True	ATTAAA	-17	NA	132560152	132584296	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_132560231_132567480_132567527_132569925_132570242_132570337_132570541_132571067_132571137_132571306_132571525_132572287_132572345_132572526_132572623_132574089_132574159_132574318_132574349_132574492_132574565_132576798_132576932_132581438_132581517_132581740_132581825_132582061_132582267_132582970
H1_mix_00018830	chr12	+	3127	15	NIC	ENSG00000112787.14	novel	1246	9	NA	NA	-67	-892	combination_of_known_junctions	FALSE	canonical	3	49	junction_6	85.1384227033139	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTTTTTTGCCTTATT	-35	True	NA	16	True	ATTAAA	-17	NA	132559979	132584296	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_132560231_132567480_132567527_132569925_132570242_132570334_132570541_132571067_132571232_132572287_132572339_132572526_132572623_132574089_132574159_132574318_132574349_132574492_132574565_132576798_132576932_132581438_132581517_132581740_132581825_132582061_132582267_132582970
H1_mix_00018834	chr12	+	632	3	FSM	ENSG00000176894.10	ENST00000543589.5	632	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	103	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGACTTTAATCTCTCAG	21	True	NA	20	True	AATAAA	-21	NA	132687641	132704985	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_132687793_132690262_132690377_132704618
H1_mix_00018836	chr12	+	2864	6	NNC	ENSG00000247077.7	novel	2811	6	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_4	53.038099513463	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTAGTTGTGAGTGTGTT	0	True	NA	16	True	AATAAA	-25	NA	132710785	132722734	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_132711068_132714857_132715037_132717438_132717565_132717709_132717799_132717989_132718121_132720677
H1_mix_00018837	chr12	+	2834	6	FSM	ENSG00000247077.7	ENST00000498926.7	2811	6	-23	0	0	0	multi-exon	FALSE	canonical	3	106	junction_4	55.6754883229595	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTAGTTGTGAGTGTGTT	2	True	NA	16	True	AATAAA	-25	NA	132710818	132722734	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_132711068_132714857_132715037_132717438_132717565_132717709_132717799_132717986_132718121_132720677
H1_mix_00018838	chr12	+	2787	5	NNC	ENSG00000247077.7	novel	2811	6	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_3	91.767028392555	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTAGTTGTGAGTGTGTT	NA	False	NA	16	True	AATAAA	-25	NA	132710773	132722734	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_132711068_132714857_132715037_132717438_132717565_132717989_132718121_132720677
H1_mix_00018848	chr12	+	3506	5	FSM	ENSG00000198040.11	ENST00000543758.5	3501	5	-5	0	4	0	multi-exon	TRUE	canonical	2	5	junction_4	115.024725602802	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTAGTGGTATTTGTGG	6	True	NA	20	True	AATAAA	-25	NA	133037295	133059606	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_133037546_133041099_133041483_133047954_133048082_133048752_133048849_133056956
H1_mix_00018849	chr12	+	6817	5	FSM	ENSG00000198040.11	ENST00000539354.6	6811	5	-6	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	58.1592640943814	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCTCAAGTTGTGTTTG	-1	True	NA	14	True	AATAAA	-18	NA	133037502	133063299	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_133037546_133041277_133041483_133047954_133048082_133048752_133048849_133056953
H1_mix_00018854	chr12	+	2349	5	FSM	ENSG00000196387.10	ENST00000355557.7	2349	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_4	36.1481327318577	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGCTTGCTGATTTTT	5	True	NA	66	True	AATAAA	-20	NA	133080922	133107428	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_133081073_133081272_133081330_133083102_133083230_133083465_133083562_133105509
H1_mix_00018856	chr12	+	1945	3	FSM	ENSG00000196387.10	ENST00000429434.3	1945	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	45	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCCTGGCTCAACATATG	667	False	NA	NA	False	AAGAAA	-40	NA	133081584	133105713	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_133083230_133083465_133083562_133105509
H1_mix_00018860	chr12	+	4567	6	NIC	ENSG00000256223.6	novel	4406	5	NA	NA	12	-5	intron_retention	FALSE	canonical	3	24	junction_1	9.15204895091804	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAACTAAGGAGATTTGTC	4	True	NA	10	True	AATAAA	-21	NA	133130638	133159460	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_133130755_133130836_133131015_133144433_133144526_133151027_133151155_133151808_133151905_133155502
H1_mix_00018861	chr12	+	3522	6	FSM	ENSG00000090612.22	ENST00000228289.9	3543	6	21	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	38.239246854508	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTGTAAATCTAGAAATG	-13	True	NA	-82	True	NA	NA	NA	133181494	133205023	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_133181628_133181945_133182031_133187871_133188073_133191488_133191616_133191907_133192004_133202143
H1_mix_00018863	chr12	-	5295	12	NNC	ENSG00000226210.3	novel	1817	11	NA	NA	87	47	at_least_one_novel_splicesite	TRUE	canonical	3	24	junction_9	93.913887055207	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACGTCTCGGGGTCAGTG	NA	False	NA	NA	False	AATAAA	-23	NA	31928	14474	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_14945_15084_15154_15912_16066_16721_16881_16968_17171_17347_17484_17722_17860_18036_18184_18372_18472_19017_22033_26800_26955_31374
H1_mix_00018864	chr12	-	1837	11	NNC	ENSG00000226210.3	novel	1817	11	NA	NA	489	6	at_least_one_novel_splicesite	TRUE	canonical	3	96	junction_6	67.6286921358087	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGTGCTTTTAATAAAG	NA	False	NA	NA	False	AATAAA	-18	NA	31526	14515	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_14945_15084_15154_15912_16066_16721_16881_16968_17171_17347_17484_17722_17860_18036_18184_18372_18472_26800_26955_31374
H1_mix_00018865	chr12	-	1906	10	NNC	ENSG00000226210.3	novel	1817	11	NA	NA	267	7	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_9	76.8362054576864	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGTGCTTTTAATAAAGG	NA	False	NA	NA	False	AATAAA	-19	NA	31748	14514	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_14945_15084_15154_15912_16066_16721_16881_16968_17171_17347_17484_17722_17860_18036_18184_18372_18472_31374
H1_mix_00018866	chr12	-	3170	1	FSM	ENSG00000261799.1	ENST00000570140.1	3170	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTTGATTTTATAATTC	NA	False	NA	-97	True	TATAAA	-27	NA	277123	273953	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_274000_277100
H1_mix_00018867	chr12	-	10701	28	FSM	ENSG00000073614.13	ENST00000399788.7	10701	28	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_20	11.8836379312107	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAAAGTTCCATGAAATTT	-33	True	NA	63	True	AAGAAA	-19	NA	389320	280056	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_285663_292758_293170_295572_295794_297040_297201_306945_307090_307453_308006_309802_309965_310884_311065_313055_313195_318105_318462_320994_321110_322416_322568_323081_323207_323599_323782_328834_329030_331818_331939_333486_333650_334240_334423_350620_350780_352204_352325_354075_354235_355157_355250_356431_356538_362962_363098_365933_366105_384030_384154_385896_385975_388926
H1_mix_00018871	chr12	-	3506	1	Genic_Genomic	ENSG00000171823.7	novel	NA	NA	NA	NA	-282	-3997	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAACAACAGCCTT	15	True	NA	NA	False	AATAAA	-32	NA	1594863	1591357	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr12_-_1591400_1594900
H1_mix_00018873	chr12	-	2033	9	FSM	ENSG00000151065.14	ENST00000280665.11	2033	9	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_4	27.0774352552083	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTGTTTTTTAATTAT	-3	True	NA	-3	True	AGTAAA	-23	NA	2004457	1946052	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_1946287_1949085_1949335_1952415_1953289_1955431_1955561_1965557_1965694_1967843_1967911_1993263_1993392_1997934_1997976_2004281
H1_mix_00018874	chr12	-	2073	10	FSM	ENSG00000151065.14	ENST00000543381.5	2073	10	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	81.3557953196867	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTCATGTTGAGTGTT	-16	True	NA	-102	True	TTTAAA	-38	NA	2004470	1946151	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_1946287_1949085_1949335_1952415_1953289_1955431_1955561_1965557_1965694_1967843_1967911_1991120_1991247_1993263_1993392_1997934_1997976_2004281
H1_mix_00018875	chr12	-	2232	3	FSM	ENSG00000151065.14	ENST00000535873.2	2231	3	-10	9	-10	-9	multi-exon	FALSE	canonical	3	221	junction_1	5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTTCACTTGCTTCTTT	NA	False	NA	NA	False	AATAAA	-9	NA	2004545	1991464	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_1993392_1997934_1997976_2004281
H1_mix_00018876	chr12	-	442	2	FSM	ENSG00000258325.2	ENST00000547794.2	442	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGGTTGCAAGGATTCAG	101	False	NA	-14	True	ATTAAA	-18	NA	2812816	2805130	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_2805318_2812561
H1_mix_00018877	chr12	-	3378	8	FSM	ENSG00000111206.13	ENST00000361953.7	3370	8	0	-8	0	5	multi-exon	FALSE	canonical	3	200	junction_6	68.6062411631086	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGGTTTATTGGCGTCT	26	True	NA	0	True	AATAAA	-23	NA	2877040	2857674	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_2859664_2864319_2864496_2864682_2864753_2866392_2866522_2868562_2868755_2872095_2872248_2873976_2874526_2876919
H1_mix_00018878	chr12	-	3483	10	FSM	ENSG00000111206.13	ENST00000342628.6	3475	10	0	-8	0	5	multi-exon	FALSE	canonical	3	21	junction_1	157.470828182223	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGGTTTATTGGCGTCT	167	False	NA	0	True	AATAAA	-23	NA	2876986	2857674	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_2859664_2861298_2861413_2864319_2864496_2864682_2864753_2865354_2865400_2866392_2866522_2868562_2868755_2872095_2872248_2873976_2874526_2876919
H1_mix_00018879	chr12	-	3549	9	FSM	ENSG00000111206.13	ENST00000359843.8	3552	9	8	-5	8	5	multi-exon	FALSE	canonical	3	45	junction_3	138.246835406819	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGGTTTATTGGCGTCT	-13	True	NA	0	True	AATAAA	-23	NA	2877166	2857674	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_2859664_2864319_2864496_2864682_2864753_2865354_2865400_2866392_2866522_2868562_2868755_2872095_2872248_2873976_2874526_2876919
H1_mix_00018880	chr12	-	1427	8	NIC	ENSG00000111206.13	novel	3370	8	NA	NA	0	-135	combination_of_known_junctions	FALSE	canonical	3	160	junction_6	80.3860582896496	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGACCAGGGAAAGAGGAGA	26	True	NA	NA	False	NA	NA	NA	2877040	2859622	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_2859664_2864319_2864496_2864682_2864753_2866392_2866522_2868562_2868755_2872095_2872245_2873976_2874526_2876919
H1_mix_00018881	chr12	-	1617	9	NIC	ENSG00000111206.13	novel	3552	9	NA	NA	0	-124	combination_of_known_junctions	FALSE	canonical	3	45	junction_3	141.49094493995	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGGAGAAACTCCTGTTT	-21	True	NA	NA	False	NA	NA	NA	2877174	2859611	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_2859664_2864319_2864496_2864682_2864753_2865354_2865400_2866392_2866522_2868562_2868755_2872095_2872245_2873976_2874526_2876919
H1_mix_00018884	chr12	-	1572	9	NNC	ENSG00000111206.13	novel	3475	10	NA	NA	7	-135	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	140.563986764036	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGACCAGGGAAAGAGGAGA	5	True	NA	NA	False	NA	NA	NA	2877148	2859622	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_2859664_2861378_2861413_2864319_2864496_2864682_2864753_2866392_2866522_2868562_2868755_2872095_2872248_2873976_2874526_2876919
H1_mix_00018885	chr12	-	360	1	FSM	ENSG00000227081.5	ENST00000495392.1	255	1	-35	-70	-35	70	mono-exon	FALSE	NA	NA	NA	NA	NA	1346	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGCAATTTTCCCTAAGA	NA	False	NA	NA	False	AATAAA	-29	NA	3211952	3211592	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_3211600_3212000
H1_mix_00018886	chr12	-	4039	2	FSM	ENSG00000287243.2	ENST00000656838.1	5847	2	0	1808	0	-45	multi-exon	FALSE	canonical	1	1	junction_1	0	403	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAGATCCAAGTTATTTT	2411	False	NA	NA	False	ATTAAA	-34	NA	3491227	3485627	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_3489603_3491163
H1_mix_00018887	chr12	-	1572	1	FSM	ENSG00000280202.1	ENST00000624384.1	1697	1	127	-2	127	2	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTCATAATTTCTTTTC	NA	False	NA	NA	False	AATAAA	-19	NA	3611876	3610304	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_3610300_3611900
H1_mix_00018888	chr12	-	637	5	FSM	ENSG00000130038.10	ENST00000535292.1	630	5	0	-7	0	7	multi-exon	FALSE	canonical	2	4	junction_1	1.29903810567666	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTCTACTATGTGTGAGG	NA	False	NA	NA	False	AATAAA	-10	NA	3654223	3640379	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_3640780_3641731_3641839_3644594_3644641_3648541_3648614_3654211
H1_mix_00018889	chr12	-	4465	8	FSM	ENSG00000111224.14	ENST00000228820.9	4449	8	29	-45	0	45	multi-exon	FALSE	canonical	3	36	junction_5	26.2344220054337	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCATCTCCACCTTGTAT	-10	True	NA	25	True	NA	NA	NA	3873370	3808815	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_3812440_3814036_3814189_3821872_3822004_3822084_3822158_3826157_3826234_3828909_3829031_3829889_3830019_3873211
H1_mix_00018891	chr12	-	4346	7	FSM	ENSG00000111224.14	ENST00000447133.7	4377	7	31	0	-18	0	multi-exon	FALSE	canonical	3	62	junction_5	19.8074060223274	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTCTGTGTATATC	7919	False	NA	-20	True	ATTAAA	-18	NA	3873417	3808860	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_3812440_3814036_3814189_3821872_3822004_3822084_3822158_3826157_3826234_3829889_3830019_3873211
H1_mix_00018894	chr12	-	295	1	Intergenic	novelGene_271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGAACATTTTTGGGGGG	NA	False	NA	NA	False	AATAAA	-26	NA	4023482	4023187	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_-_4023200_4023500
H1_mix_00018895	chr12	-	588	2	FSM	ENSG00000255920.4	ENST00000656828.1	1374	2	0	786	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTATTTATTTATTTTT	0	True	NA	-6	True	AATAAA	-15	NA	4275456	4248766	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_4249194_4275295
H1_mix_00018896	chr12	-	602	2	FSM	ENSG00000255920.4	ENST00000663068.1	621	2	13	6	13	-4	multi-exon	FALSE	canonical	3	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTATATTTTATTTATTT	NA	False	NA	-12	True	AATAAA	-9	NA	4276239	4248772	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_4249194_4276058
H1_mix_00018897	chr12	-	440	1	FSM	ENSG00000213970.4	ENST00000493323.1	440	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCTCAGCTAATAAAGGCA	NA	False	NA	NA	False	NA	NA	NA	4324811	4324371	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_4324400_4324800
H1_mix_00018898	chr12	-	3825	14	FSM	ENSG00000047621.12	ENST00000261250.8	3817	14	0	-8	0	8	multi-exon	FALSE	canonical	3	33	junction_5	7.75054874942154	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTACATGGCATTTACA	8	True	NA	NA	False	AATAAA	-25	NA	4538469	4487726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_4489900_4490521_4490590_4491176_4491235_4500137_4500341_4505305_4505381_4517060_4517190_4518057_4518256_4518773_4518881_4525253_4525376_4525483_4525584_4529868_4530051_4534156_4534303_4536016_4536220_4538408
H1_mix_00018899	chr12	-	2168	14	FSM	ENSG00000047621.12	ENST00000545746.5	2168	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_13	13.5964666485614	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCTTTTACTTTCTTTG	-31	True	NA	NA	False	ATTAAA	-14	NA	4538508	4489414	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_4489900_4490521_4490590_4491176_4491235_4500137_4500341_4505305_4505381_4517060_4517190_4518057_4518256_4518773_4518881_4525253_4525376_4525483_4525584_4529868_4530051_4534156_4534303_4536016_4536212_4538408
H1_mix_00018902	chr12	-	3620	24	ISM	ENSG00000047617.17	ENST00000682330.1	3683	25	22455	-1	22424	0	3prime_fragment	FALSE	canonical	1	3	junction_9	4.89897948556636	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCATCTGTTGTCTTTGGT	521	False	NA	NA	False	AATAAA	-26	NA	5922804	5562653	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_5563569_5565557_5565664_5575833_5576016_5577954_5578008_5578365_5578519_5599483_5599630_5612655_5612757_5612900_5612959_5615185_5615298_5635151_5635348_5647726_5647802_5732519_5732631_5739316_5739400_5744156_5744318_5750835_5750971_5799506_5799572_5806051_5806094_5807312_5807369_5827768_5827821_5830434_5830490_5832451_5832604_5854042_5854142_5921039_5921367_5922619
H1_mix_00018903	chr12	-	8786	52	FSM	ENSG00000110799.14	ENST00000261405.10	8830	52	44	0	39	0	multi-exon	TRUE	canonical	3	66	junction_43	102.706780761069	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGCTGGTGCACTGTGTC	282	False	NA	-4	True	AATAAA	-24	NA	6124626	5948876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_5949204_5949785_5949884_5951843_5951884_5952390_5952520_5953495_5953595_5967485_5967603_5968126_5968168_5969210_5969392_5971598_5971710_5976110_5976261_5981785_5981992_5983149_5983255_5985044_5985120_5985562_5985666_5991818_5992019_5993861_5994204_5994414_5994608_5996001_5996223_6011616_6011795_6012086_6012131_6013480_6013646_6016088_6016233_6016515_6016657_6016753_6016871_6018364_6019744_6021899_6022036_6022739_6022899_6023630_6023788_6025579_6025694_6025905_6026047_6029341_6029489_6031443_6031579_6034687_6034827_6036387_6036492_6044290_6044452_6046722_6046818_6052542_6052784_6056856_6057073_6057848_6058045_6062953_6063055_6064245_6064385_6065136_6065274_6071296_6071344_6072330_6072443_6073618_6073742_6075334_6075552_6095459_6095585_6110373_6110583_6110865_6110969_6121173_6121339_6123141_6123197_6124420
H1_mix_00018904	chr12	-	405	1	FSM	ENSG00000256103.2	ENST00000537967.1	258	1	2	-149	2	149	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTAAAAAACATAAAATAAA	14	False	NA	NA	False	AATAAA	-19	NA	6270423	6270018	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6270000_6270400
H1_mix_00018905	chr12	-	2461	5	FSM	ENSG00000067182.8	ENST00000536717.5	1503	5	-643	-315	-643	5	multi-exon	FALSE	canonical	3	140	junction_3	12.369316876853	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTGGAGACAGTGGTCT	10011	False	NA	-8	True	ACTAAA	-20	NA	6332024	6328765	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6329623_6329777_6330067_6330266_6330296_6330597_6330712_6330852
H1_mix_00018906	chr12	-	2180	10	FSM	ENSG00000067182.8	ENST00000162749.7	2171	10	0	-9	0	-5	multi-exon	FALSE	canonical	3	134	junction_9	12.9710027977889	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGACAGTGGTCTGTCG	16	True	NA	-4	True	ACTAAA	-24	NA	6342076	6328761	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6329623_6329777_6330067_6330266_6330296_6330597_6330712_6330852_6330927_6333068_6333148_6333366_6333517_6333736_6333866_6334090_6334245_6341775
H1_mix_00018908	chr12	-	4967	10	NNC	ENSG00000111319.13	novel	3040	11	NA	NA	-2684	-2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_9	94.2661061327564	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAATGTCTGGAGAGCTG	1545	False	NA	-4	True	AATAAA	-14	NA	6358977	6346848	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_6348254_6348726_6348803_6348949_6349006_6349163_6349222_6349326_6349406_6354437_6354556_6354749_6354849_6355271_6355436_6355776_6355881_6356169
H1_mix_00018910	chr12	-	3481	12	FSM	ENSG00000111319.13	ENST00000360168.7	3481	12	0	0	0	0	multi-exon	TRUE	canonical	3	238	junction_9	26.8872761698672	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGAGAGCTGGATGGG	-1	True	NA	2	True	AATAAA	-20	NA	6375224	6346842	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6348254_6348726_6348803_6348949_6349006_6349163_6349222_6349326_6349406_6354437_6354556_6354749_6354849_6355271_6355436_6355776_6355881_6362050_6362242_6363442_6363711_6374367
H1_mix_00018911	chr12	-	3833	13	FSM	ENSG00000111319.13	ENST00000228916.7	3149	13	-684	0	-219	0	multi-exon	FALSE	canonical	3	50	junction_12	70.310027734314	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGTCTGGAGAGCTGGA	7749	False	NA	-2	True	AATAAA	-16	NA	6376247	6346846	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6348254_6348726_6348803_6348949_6349006_6349163_6349222_6349326_6349406_6354437_6354556_6354749_6354849_6355271_6355436_6355776_6355881_6362050_6362242_6363442_6363711_6374367_6374838_6375504
H1_mix_00018918	chr12	-	429	1	FSM	ENSG00000213942.3	ENST00000498412.1	377	1	-5	-47	-5	47	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAGAGGAATTACCCAAA	NA	False	NA	NA	False	AATAAA	-20	NA	6410018	6409589	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6409600_6410000
H1_mix_00018919	chr12	-	671	4	NNC	ENSG00000111639.8	novel	898	3	NA	NA	0	70091	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1072.71938963034	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGGTGTAGTGGCAGGC	-5	True	NA	NA	False	NA	NA	NA	6493262	6421794	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_6421832_6492149_6492468_6492861_6492973_6493057
H1_mix_00018920	chr12	-	650	3	NIC	ENSG00000215039.8	novel	865	5	NA	NA	13	-4	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	12.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGAGGTGCTATTGTTT	68	False	NA	NA	False	ATTAAA	-24	NA	6451489	6447619	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_6448151_6448639_6448738_6451468
H1_mix_00018921	chr12	-	3139	4	FSM	ENSG00000139190.17	ENST00000361716.8	3139	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	8.05536398239638	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTTGGTTGTTGTTTGG	-2	True	NA	NA	False	ATTAAA	-1	NA	6470677	6462236	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6464942_6465841_6466001_6466224_6466352_6470529
H1_mix_00018922	chr12	-	898	3	FSM	ENSG00000111639.8	ENST00000229238.5	898	3	0	0	0	0	multi-exon	FALSE	canonical	3	2135	junction_2	129.5	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGTACTACTCTCATAA	-5	True	NA	-6	True	AATATA	-20	NA	6493262	6491885	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6492468_6492861_6492973_6493057
H1_mix_00018923	chr12	-	601	3	FSM	ENSG00000111639.8	ENST00000537701.5	601	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1197	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAGACTATGAAGTCTTG	-19	True	NA	16	True	NA	NA	NA	6493841	6492102	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6492468_6492861_6492973_6493716
H1_mix_00018924	chr12	-	858	3	FSM	ENSG00000111639.8	ENST00000543164.5	814	3	0	-44	0	0	multi-exon	FALSE	canonical	3	203	junction_2	1095.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAGACTATGAAGTCTTG	-18	True	NA	16	True	NA	NA	NA	6493840	6492102	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6492468_6492861_6492973_6493458
H1_mix_00018925	chr12	-	2680	9	NIC	ENSG00000010295.20	novel	2786	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_3	12.7058057595731	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTGTCACTGTCTCAA	-10	True	NA	0	True	AATGAA	-23	NA	6556071	6539527	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_6540589_6541511_6541643_6548064_6548161_6548424_6548546_6548667_6548826_6549755_6549897_6550694_6550791_6550940_6551002_6555256
H1_mix_00018926	chr12	-	2677	9	FSM	ENSG00000010295.20	ENST00000396840.6	2677	9	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	18.2054250156375	5105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTGTCACTGTCTCAA	-10	True	NA	0	True	AATGAA	-23	NA	6556071	6539527	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6540589_6541511_6541643_6548064_6548158_6548424_6548546_6548667_6548826_6549755_6549897_6550694_6550791_6550940_6551002_6555256
H1_mix_00018927	chr12	-	3001	9	FSM	ENSG00000010295.20	ENST00000488007.5	3001	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_8	20.9609011018133	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAATGGATTCTTTAATAA	-10	True	NA	-49	True	NA	NA	NA	6556071	6539576	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6540589_6541511_6541643_6548064_6548546_6548667_6548826_6549755_6549897_6550694_6550791_6550940_6551002_6551397_6551504_6555256
H1_mix_00018928	chr12	-	2653	16	NIC	ENSG00000111641.12	novel	2791	17	NA	NA	0	2	combination_of_known_junctions	FALSE	non_canonical	3	264	junction_12	37.7137758503294	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAGTATTTTTGAGGGAA	1	True	NA	-1	True	AATACA	-20	NA	6568291	6556867	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563513_6563611_6563772_6563890_6563947_6566100_6566337_6566528_6566618_6566776_6566823_6567815_6567923_6568206
H1_mix_00018929	chr12	-	2109	9	ISM	ENSG00000285238.2	ENST00000646322.1	2356	14	23642	-65	23642	15	intron_retention	FALSE	canonical	3	332	junction_2	24.8391701753501	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGAGTATTTTTGAGG	7235	False	NA	-4	True	AATACA	-17	NA	6563750	6556870	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314
H1_mix_00018930	chr12	-	2686	16	NIC	ENSG00000111641.12	novel	2701	16	NA	NA	2	-2	combination_of_known_junctions	FALSE	non_canonical	3	103	junction_15	84.1394081272266	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCACTGAGTATTTTTGA	19	True	NA	-6	True	AATACA	-15	NA	6568273	6556872	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563513_6563611_6563772_6563890_6563947_6566100_6566325_6566528_6566618_6566776_6566823_6567815_6567923_6568138
H1_mix_00018931	chr12	-	2659	16	NIC	ENSG00000111641.12	novel	3038	16	NA	NA	2	0	combination_of_known_junctions	FALSE	non_canonical	3	175	junction_12	55.5093585703248	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGAGTATTTTTGAGG	-20	True	NA	-4	True	AATACA	-17	NA	6568312	6556870	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563513_6563611_6563772_6563890_6563947_6566100_6566325_6566528_6566618_6566776_6566823_6567815_6567923_6568206
H1_mix_00018933	chr12	-	6438	40	FSM	ENSG00000111642.16	ENST00000357008.7	6438	40	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	223.003218003628	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTCTGGTTCAGTGTGGG	6224	False	NA	-12	True	AATAAA	-18	NA	6607356	6570081	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6570694_6570868_6571033_6573070_6573270_6577784_6577918_6578028_6578138_6578408_6578547_6578845_6578918_6581037_6581174_6581290_6581389_6581648_6581815_6582136_6582282_6582614_6582749_6582847_6582937_6583026_6583114_6583197_6583379_6587383_6587560_6587711_6587950_6588297_6588423_6591465_6591584_6591693_6591826_6591915_6592058_6592392_6592567_6592695_6592818_6593090_6593229_6593415_6593617_6594458_6594651_6595333_6595431_6596005_6596138_6597893_6598100_6598221_6598426_6599772_6600013_6600216_6600357_6600533_6600670_6600925_6601054_6601288_6601531_6601647_6601767_6601959_6602176_6602375_6602498_6606273_6606452_6607299
H1_mix_00018934	chr12	-	6491	40	FSM	ENSG00000111642.16	ENST00000544040.7	6491	40	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_37	197.025297320807	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTCTGGTTCAGTGTGGG	2	True	NA	-12	True	AATAAA	-18	NA	6607379	6570081	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6570694_6570868_6571033_6573073_6573270_6577784_6577918_6578028_6578138_6578408_6578547_6578845_6578918_6581043_6581174_6581290_6581389_6581648_6581815_6582136_6582282_6582614_6582749_6582847_6582937_6583026_6583114_6583197_6583379_6587383_6587560_6587711_6587950_6588297_6588423_6591465_6591584_6591693_6591826_6591915_6592058_6592392_6592567_6592695_6592818_6593090_6593229_6593415_6593617_6594458_6594651_6595333_6595431_6596005_6596138_6597893_6598100_6598221_6598426_6599772_6600013_6600216_6600396_6600533_6600670_6600925_6601054_6601288_6601531_6601647_6601767_6601959_6602176_6602375_6602498_6606273_6606452_6607299
H1_mix_00018935	chr12	-	6631	40	FSM	ENSG00000111642.16	ENST00000645022.1	6673	40	42	0	42	0	multi-exon	FALSE	canonical	3	161	junction_37	193.284292902894	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTCTGGTTCAGTGTGGG	6040	False	NA	-12	True	AATAAA	-18	NA	6607540	6570081	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6570694_6570868_6571033_6573073_6573270_6577784_6577918_6578028_6578138_6578408_6578547_6578845_6578918_6581043_6581174_6581290_6581389_6581648_6581815_6582136_6582282_6582614_6582749_6582847_6582937_6583026_6583114_6583197_6583379_6587383_6587560_6587711_6587950_6588297_6588423_6591465_6591584_6591693_6591826_6591915_6592058_6592392_6592567_6592695_6592818_6593090_6593229_6593415_6593617_6594458_6594651_6595333_6595431_6596005_6596138_6597893_6598100_6598221_6598426_6599772_6600013_6600216_6600396_6600533_6600670_6600925_6601054_6601288_6601531_6601647_6601767_6601959_6602155_6602375_6602498_6606273_6606452_6607299
H1_mix_00018936	chr12	-	6501	41	NIC	ENSG00000111642.16	novel	6297	40	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_40	213.677606161713	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGCATAAAAAACCACAGCAA	7181	False	NA	5	True	AATAAA	-31	NA	6614157	6570144	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_6570694_6570868_6571033_6573073_6573270_6577784_6577918_6578028_6578138_6578408_6578547_6578845_6578918_6581043_6581174_6581290_6581389_6581648_6581815_6582136_6582282_6582614_6582749_6582847_6582937_6583026_6583114_6583197_6583379_6587383_6587560_6587711_6587950_6588297_6588423_6591465_6591584_6591693_6591826_6591915_6592058_6592392_6592567_6592695_6592818_6593090_6593229_6593415_6593617_6594458_6594651_6595333_6595431_6596005_6596138_6597893_6598100_6598221_6598426_6599772_6600013_6600216_6600357_6600533_6600670_6600925_6601054_6601288_6601531_6601647_6601767_6601959_6602176_6602375_6602498_6606273_6606452_6607299_6607418_6614083
H1_mix_00018938	chr12	-	4948	31	FSM	ENSG00000111642.16	ENST00000643815.1	4945	31	0	-3	0	0	multi-exon	FALSE	canonical	3	57	junction_15	173.504982317191	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAGTGGAAAAAAAAAA	7438	False	NA	-31	True	NA	NA	NA	6599971	6570180	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6570694_6570868_6571033_6573073_6573270_6577784_6577918_6578028_6578138_6578408_6578547_6578845_6578918_6581043_6581174_6581290_6581389_6581648_6581815_6582136_6582282_6582614_6582749_6582847_6582937_6583026_6583114_6583197_6583376_6587383_6587560_6587711_6587950_6588297_6588423_6591465_6591584_6591693_6591826_6591915_6592058_6592392_6592567_6592695_6592818_6593090_6593229_6593415_6593617_6594458_6594651_6595333_6595431_6596005_6596138_6597893_6598100_6598221_6598426_6599772
H1_mix_00018939	chr12	-	6163	39	FSM	ENSG00000111642.16	ENST00000642594.1	6142	39	0	-21	0	0	multi-exon	FALSE	canonical	0	0	junction_2	204.066147075578	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAGTGGAAAAAAAAAA	7260	False	NA	-31	True	NA	NA	NA	6606320	6570180	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6570694_6570868_6571033_6573070_6573270_6577784_6577918_6578028_6578138_6578408_6578547_6578845_6578918_6581043_6581174_6581290_6581389_6581648_6581815_6582136_6582282_6582614_6582749_6582847_6582937_6583026_6583114_6583197_6583379_6587383_6587560_6587711_6587950_6588297_6588423_6591465_6591584_6591693_6591826_6591915_6592058_6592392_6592567_6592695_6592818_6593090_6593229_6593415_6593617_6594458_6594651_6595333_6595431_6596005_6596138_6597893_6598100_6598221_6598426_6599772_6600013_6600216_6600396_6600533_6600670_6600925_6601054_6601288_6601531_6601647_6601767_6601959_6602155_6602375_6602498_6606273
H1_mix_00018940	chr12	-	6319	38	FSM	ENSG00000111642.16	ENST00000642879.1	6309	38	0	-10	0	0	multi-exon	FALSE	canonical	3	93	junction_31	196.750720133116	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAGTGGAAAAAAAAAA	14	True	NA	-31	True	NA	NA	NA	6606434	6570180	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6570694_6570868_6571033_6573073_6573270_6577784_6577918_6578028_6578138_6578408_6578547_6578845_6578918_6581043_6581174_6581290_6581389_6581648_6581815_6582136_6582282_6582614_6582749_6582847_6582937_6583026_6583379_6587383_6587560_6587711_6587950_6588297_6588423_6591465_6591584_6591693_6591826_6591915_6592058_6592392_6592567_6592695_6592818_6593090_6593229_6593415_6593617_6594458_6594651_6595333_6595431_6596005_6596138_6597893_6598100_6598221_6598426_6599772_6600013_6600216_6600357_6600533_6600670_6600925_6601054_6601288_6601531_6601647_6601767_6601959_6602155_6602375_6602498_6606273
H1_mix_00018941	chr12	-	6366	40	FSM	ENSG00000111642.16	ENST00000646806.1	6359	40	0	-7	0	0	multi-exon	FALSE	canonical	3	93	junction_32	198.820152377602	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAGTGGAAAAAAAAAA	-4	True	NA	-31	True	NA	NA	NA	6607413	6570180	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6570694_6570868_6571033_6573073_6573270_6577784_6577918_6578028_6578138_6578408_6578547_6578845_6578918_6581043_6581174_6581290_6581389_6581648_6581815_6582136_6582282_6582614_6582749_6582847_6582937_6583026_6583114_6583197_6583379_6587383_6587560_6587711_6587950_6588297_6588423_6591465_6591584_6591693_6591826_6591915_6592058_6592392_6592567_6592695_6592818_6593090_6593229_6593415_6593617_6594458_6594651_6595333_6595431_6596005_6596138_6597893_6598100_6598221_6598426_6599772_6600013_6600216_6600357_6600533_6600670_6600925_6601054_6601288_6601531_6601647_6601767_6601959_6602155_6602375_6602498_6606273_6606452_6607299
H1_mix_00018946	chr12	-	735	4	FSM	ENSG00000111644.8	ENST00000544352.1	811	4	76	0	76	0	multi-exon	FALSE	canonical	2	4	junction_1	1.88561808316413	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGCAGGAGCAAGGAGTG	241	False	NA	NA	False	NA	NA	NA	6647207	6644497	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6644606_6645219_6645338_6646482_6646578_6646793
H1_mix_00018947	chr12	-	1656	8	FSM	ENSG00000111653.20	ENST00000341550.9	1659	8	0	3	0	-3	multi-exon	FALSE	canonical	3	70	junction_4	32.6096267243592	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACATACGTACTGCTATAC	-3	True	NA	NA	False	AATAAA	-16	NA	6663119	6650303	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6651235_6651323_6651386_6652270_6652419_6652661_6652768_6652935_6653051_6653229_6653397_6656726_6656799_6663064
H1_mix_00018948	chr12	-	1392	8	FSM	ENSG00000111653.20	ENST00000396807.8	1393	8	1	0	1	0	multi-exon	FALSE	canonical	3	69	junction_4	32.9142361110737	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTTTATTGTAG	2	True	NA	-12	True	AATAAA	-15	NA	6663139	6650590	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6651235_6651323_6651386_6652270_6652419_6652661_6652771_6652935_6653051_6653229_6653397_6656726_6656799_6663064
H1_mix_00018951	chr12	-	3588	10	NIC	ENSG00000126746.18	novel	3407	12	NA	NA	-9	0	intron_retention	FALSE	canonical	0	0	junction_4	97.1959964627919	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGGCAGTGGAGCTACT	8538	False	NA	-2	True	AATAAA	-15	NA	6688868	6666476	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_6668116_6669030_6669190_6670759_6670839_6673215_6673441_6677166_6677260_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166
H1_mix_00018952	chr12	-	3710	9	ISM	ENSG00000126746.18	ENST00000319770.7	3266	10	427	0	-187	0	3prime_fragment	FALSE	canonical	3	184	junction_3	35.387144558441	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGGCAGTGGAGCTACT	8323	False	NA	-2	True	AATAAA	-15	NA	6689083	6666476	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_6668116_6669030_6669190_6670759_6670839_6673215_6673441_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166
H1_mix_00018953	chr12	-	3479	10	NNC	ENSG00000126746.18	novel	3266	10	NA	NA	-182	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_9	79.4676733716995	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGGCAGTGGAGCTACT	8328	False	NA	-2	True	AATAAA	-15	NA	6689078	6666476	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_6668116_6669030_6669190_6670759_6670839_6673215_6673441_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166_6688227_6688452
H1_mix_00018954	chr12	-	3510	12	FSM	ENSG00000126746.18	ENST00000683879.1	3407	12	0	-103	0	103	multi-exon	FALSE	canonical	0	0	junction_5	106.783089013072	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAAGTGCTTGTGTGATG	-6	True	NA	NA	False	NA	NA	NA	6689375	6666373	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6668116_6669030_6669190_6670759_6670839_6672349_6672533_6673215_6673441_6677166_6677260_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166_6688227_6689097
H1_mix_00018955	chr12	-	3369	10	FSM	ENSG00000126746.18	ENST00000319770.7	3266	10	0	-103	0	103	multi-exon	FALSE	canonical	3	32	junction_9	73.8102338248833	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAAGTGCTTGTGTGATG	-26	True	NA	NA	False	NA	NA	NA	6689510	6666373	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6668116_6669030_6669190_6670759_6670839_6673215_6673441_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166_6688227_6689097
H1_mix_00018956	chr12	-	3008	11	FSM	ENSG00000126746.18	ENST00000396801.7	3008	11	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_10	87.1417810238005	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTTAAATCAT	-26	True	NA	61	True	NA	NA	NA	6689510	6666647	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6668116_6669030_6669190_6670759_6670839_6672349_6672533_6673215_6673441_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166_6688227_6689367
H1_mix_00018957	chr12	-	2976	10	NIC	ENSG00000126746.18	novel	2978	11	NA	NA	-182	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_9	74.933715565125	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGTTTTGTTTATTTT	8328	False	NA	-21	True	TATAAA	-26	NA	6689078	6666729	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_6668116_6669030_6669190_6670759_6670839_6673215_6673441_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166_6688227_6688702
H1_mix_00018963	chr12	-	1307	6	NNC	ENSG00000139200.14	novel	2711	5	NA	NA	19	1613	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	38.1753847393841	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTCCCTCTTCCTAAAT	64	False	NA	0	True	AATAAA	-35	NA	6700781	6692177	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_6692447_6695429_6695652_6696442_6696525_6697286_6697793_6698044_6698105_6700613
H1_mix_00018964	chr12	-	2433	6	FSM	ENSG00000139200.14	ENST00000540656.5	2432	6	0	-1	0	0	multi-exon	FALSE	canonical	3	23	junction_5	36.9724221548981	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGAGTCCCCTGGTTCTGC	415	False	NA	-6	True	AATAAA	-15	NA	6700430	6693790	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6695058_6695429_6695652_6696442_6696525_6697286_6697793_6698044_6698105_6700134
H1_mix_00018965	chr12	-	2853	5	NIC	ENSG00000139200.14	novel	2711	5	NA	NA	-48	0	intron_retention	FALSE	canonical	3	23	junction_4	36.4725924496738	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGAGTCCCCTGGTTCTGC	367	False	NA	-6	True	AATAAA	-15	NA	6700478	6693790	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_6695652_6696442_6696525_6697286_6697793_6698044_6698105_6700134
H1_mix_00018966	chr12	-	2324	6	FSM	ENSG00000139200.14	ENST00000320591.9	2323	6	0	-1	0	0	multi-exon	FALSE	canonical	3	41	junction_1	25.9121593079388	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGAGTCCCCTGGTTCTGC	11	True	NA	-6	True	AATAAA	-15	NA	6700800	6693790	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6695058_6695429_6695652_6696442_6696525_6697286_6697793_6698044_6698105_6700613
H1_mix_00018967	chr12	-	2711	5	FSM	ENSG00000139200.14	ENST00000534837.6	2711	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_4	10.0591997693654	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGAGTCCCCTGGTTCTGC	-4	True	NA	-6	True	AATAAA	-15	NA	6700815	6693790	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6695652_6696442_6696525_6697286_6697793_6698044_6698105_6700613
H1_mix_00018968	chr12	-	1508	10	NNC	ENSG00000089693.11	novel	1555	9	NA	NA	0	30121	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1101.75833652338	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAAAGAATGAAAGG	402	False	NA	NA	False	AAAAAG	-1	NA	6753069	6717874	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_6717902_6747997_6748548_6748769_6748983_6749847_6750008_6750176_6750306_6750712_6750767_6751640_6751677_6751924_6752055_6752284_6752363_6752938
H1_mix_00018969	chr12	-	1555	9	FSM	ENSG00000089693.11	ENST00000203630.10	1555	9	0	0	0	0	multi-exon	FALSE	canonical	3	2988	junction_5	292.728970209646	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTGGGATTCTGGCTGT	-1	True	NA	-19	True	AATAAA	-18	NA	6753141	6747995	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6748548_6748769_6748983_6749847_6750008_6750176_6750306_6750712_6750767_6751640_6751677_6751924_6752055_6752284_6752363_6752938
H1_mix_00018972	chr12	-	2760	5	FSM	ENSG00000111665.12	ENST00000422785.7	2760	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	137.361521176784	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTATGTGTGTGTGTAT	2	True	NA	-6	True	AAGAAA	-19	NA	6851269	6844792	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6846904_6849564_6849859_6850466_6850597_6850832_6851010_6851221
H1_mix_00018973	chr12	-	1995	3	FSM	ENSG00000111665.12	ENST00000603043.1	1995	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	3.5	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAACATGATGTCTGCA	3542	False	NA	-72	True	NA	NA	NA	6848367	6844858	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6846368_6846724_6846904_6848060
H1_mix_00018975	chr12	-	1156	6	FSM	ENSG00000111665.12	ENST00000538862.7	1144	6	0	-12	0	0	multi-exon	FALSE	canonical	3	298	junction_2	15.8189759466282	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCGAGTTTTCTGTGTGT	-15	True	NA	-2	True	AAAAAG	-16	NA	6851286	6848815	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6849199_6849322_6849430_6849564_6849859_6850466_6850597_6850832_6851010_6851221
H1_mix_00018976	chr12	-	999	5	FSM	ENSG00000111665.12	ENST00000540683.1	985	5	0	-14	0	0	multi-exon	TRUE	canonical	3	41	junction_1	122.289615258206	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTAAACCTTGCACCGA	22	True	NA	-15	True	ATTAAA	-33	NA	6851249	6848828	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6849199_6849564_6849859_6850466_6850597_6850832_6851010_6851221
H1_mix_00018978	chr12	-	1237	3	FSM	ENSG00000111671.10	ENST00000524270.6	1203	3	-33	-1	0	1	multi-exon	FALSE	canonical	3	41	junction_2	42	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTCTTGTTTTTTTTTTT	NA	False	NA	-3	True	AGTAAA	-28	NA	6873336	6870933	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6871320_6872237_6872998_6873245
H1_mix_00018980	chr12	-	1335	11	NNC	ENSG00000215021.10	novel	1379	10	NA	NA	0	51771	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	614.298209341359	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAACAGAGGTAAATAAAGC	4	True	NA	NA	False	NA	NA	NA	6970618	6913555	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_6913583_6965351_6965713_6965910_6965917_6966423_6966501_6967170_6967249_6967675_6967780_6967891_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
H1_mix_00018981	chr12	-	1401	10	NNC	ENSG00000215021.10	novel	1379	10	NA	NA	0	51771	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	611.957877998514	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAACAGAGGTAAATAAAGC	-20	True	NA	NA	False	NA	NA	NA	6970684	6913555	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_6913583_6965351_6965715_6966419_6966501_6967170_6967249_6967675_6967780_6967891_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
H1_mix_00018982	chr12	-	1195	1	FSM	ENSG00000272173.1	ENST00000607421.1	1097	1	0	-98	0	98	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTCAAACTGTAGGTGGT	9043	False	NA	95	True	NA	NA	NA	6944604	6943409	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6943400_6944600
H1_mix_00018983	chr12	-	1735	9	FSM	ENSG00000215021.10	ENST00000677354.1	1735	9	0	0	0	0	multi-exon	FALSE	canonical	1	191	junction_2	554.93489201437	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAGGCTTCACGTGTTCA	4	True	NA	-21	True	AATAAA	-21	NA	6970618	6965351	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6965713_6965910_6965917_6966423_6966501_6967170_6967780_6967891_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
H1_mix_00018984	chr12	-	1354	10	FSM	ENSG00000215021.10	ENST00000535923.6	1379	10	0	25	0	0	multi-exon	FALSE	canonical	1	191	junction_2	527.980662758508	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAGGCTTCACGTGTTCA	0	True	NA	-21	True	AATAAA	-21	NA	6970664	6965351	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6965713_6965910_6965917_6966423_6966501_6967170_6967249_6967675_6967780_6967891_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
H1_mix_00018985	chr12	-	1518	9	FSM	ENSG00000215021.10	ENST00000543465.5	1518	9	0	0	0	0	multi-exon	FALSE	canonical	1	191	junction_2	552.997513556797	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAGGCTTCACGTGTTCA	8820	False	NA	-21	True	AATAAA	-21	NA	6970716	6965351	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6965713_6965910_6965917_6966423_6966501_6967170_6967249_6967675_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
H1_mix_00018986	chr12	-	1329	9	FSM	ENSG00000215021.10	ENST00000440277.6	1354	9	0	25	0	0	multi-exon	FALSE	canonical	1	85	junction_4	645.079052810584	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAGGCTTCACGTGTTCA	8783	False	NA	-21	True	AATAAA	-21	NA	6970753	6965351	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6965713_6965910_6965917_6966423_6966501_6967170_6967239_6967891_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
H1_mix_00018987	chr12	-	1471	6	FSM	ENSG00000215021.10	ENST00000678000.1	1471	6	0	0	0	0	multi-exon	FALSE	canonical	3	1404	junction_1	54.8612796059297	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAACCTTGTGCTGAACCT	14	True	NA	NA	False	NA	NA	NA	6970650	6966464	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6966501_6967170_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
H1_mix_00018990	chr12	-	2242	13	FSM	ENSG00000111684.11	ENST00000261407.9	2235	13	2	-9	0	9	multi-exon	FALSE	canonical	3	617	junction_8	44.4762733250987	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGACTGCTCTCTTTCA	24	True	NA	1	True	GATAAA	-36	NA	7018474	6976175	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6976892_6977133_6977263_6977366_6977526_6977597_6977746_6978340_6978508_6978602_6978690_6979470_6979580_6981003_6981183_6981594_6981633_6981810_6981905_6982675_6982783_6983431_6983540_7018273
H1_mix_00018991	chr12	-	2912	11	FSM	ENSG00000111684.11	ENST00000535479.5	2902	11	0	-10	0	9	multi-exon	FALSE	canonical	3	617	junction_6	42.5536132425908	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGACTGCTCTCTTTCA	21	True	NA	1	True	GATAAA	-36	NA	7018477	6976175	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6976892_6977133_6977263_6977366_6978508_6978602_6978690_6979470_6979580_6981003_6981183_6981594_6981633_6981810_6981905_6982675_6982783_6983431_6983540_7018273
H1_mix_00018992	chr12	-	1412	8	FSM	ENSG00000111684.11	ENST00000536797.5	1412	8	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_3	252.067370327207	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAATCCAATCCTCAGGGT	24	True	NA	NA	False	GGGGCT	-23	NA	7018474	6977839	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6978508_6978602_6978690_6979470_6979580_6981594_6981633_6981810_6981905_6982675_6982783_6983431_6983540_7018273
H1_mix_00018993	chr12	-	1135	2	FSM	ENSG00000111684.11	ENST00000537179.1	1135	2	0	0	0	0	multi-exon	FALSE	canonical	3	679	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGAGTGTGGGCAGCTT	266	False	NA	NA	False	NA	NA	NA	6979270	6978040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6978508_6978602
H1_mix_00018994	chr12	-	759	3	FSM	ENSG00000111684.11	ENST00000620843.1	541	3	-218	0	-218	0	multi-exon	FALSE	canonical	3	707	junction_1	34.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTATTTGAAGAACCCCAG	NA	False	NA	NA	False	NA	NA	NA	6983001	6981293	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6981633_6981810_6981905_6982675
H1_mix_00018995	chr12	-	2423	10	FSM	ENSG00000159403.18	ENST00000648162.1	1881	10	0	-542	0	15	multi-exon	FALSE	canonical	3	15	junction_9	7.35014907046277	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGTATTTAATTTATATAA	8432	False	NA	8	True	AATAAA	-39	NA	7090792	7080198	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_7081302_7082031_7082107_7085860_7086017_7086378_7086458_7088609_7088732_7088838_7088987_7089292_7089490_7089586_7089734_7090055_7090249_7090589
H1_mix_00018996	chr12	-	2508	11	FSM	ENSG00000159403.18	ENST00000647956.2	2488	11	0	-20	0	15	multi-exon	FALSE	canonical	3	17	junction_9	7.33757453113766	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGTATTTAATTTATATAA	4	True	NA	8	True	AATAAA	-39	NA	7092445	7080198	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_7081302_7082031_7082107_7085860_7086017_7086378_7086458_7088609_7088732_7088838_7088987_7089292_7089490_7089586_7089734_7090055_7090249_7091451_7091681_7092386
H1_mix_00018997	chr12	-	3335	6	FSM	ENSG00000139178.12	ENST00000266542.9	3335	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	5.62138772902208	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATGTGTATGTCTAGA	13	True	NA	-5	True	AATATA	-13	NA	7109214	7094553	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_7097164_7099685_7099761_7099900_7100027_7101897_7102088_7108250_7108480_7109109
H1_mix_00018998	chr12	-	1569	6	FSM	ENSG00000139178.12	ENST00000544702.5	1569	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	7.70973410695855	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGGGGCTTGAACAGGG	-11	True	NA	NA	False	NA	NA	NA	7109238	7096390	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_7097164_7099685_7099808_7099900_7100027_7101897_7102088_7108250_7108480_7109109
H1_mix_00019000	chr12	-	964	4	FSM	ENSG00000139194.8	ENST00000266560.8	957	4	0	-7	0	7	multi-exon	FALSE	canonical	3	32	junction_1	1.69967317119759	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCCATTTCTTTGTCCT	-1	True	NA	-8	True	TTTAAA	-23	NA	7128889	7123678	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_7124175_7124628_7124731_7128239_7128419_7128702
H1_mix_00019001	chr12	-	1238	2	FSM	ENSG00000184344.4	ENST00000329913.4	1236	2	0	-2	0	2	multi-exon	FALSE	canonical	3	156	junction_1	0	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGTGTTTATAATTTGT	0	True	NA	17	True	AATAAA	-44	NA	7695775	7689781	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_7690705_7695460
H1_mix_00019003	chr12	-	2926	11	NIC	ENSG00000173262.12	novel	3462	11	NA	NA	-18	474	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	242.567433923023	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTACCATGTCACTGTGG	8597	False	NA	NA	False	NA	NA	NA	7873132	7813054	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_7814535_7817830_7818035_7819481_7819584_7821220_7821326_7827494_7827683_7828703_7828867_7829765_7830007_7831603_7831765_7832721_7832815_7869862_7869938_7873018
H1_mix_00019004	chr12	-	258	2	ISM	ENSG00000173262.12	ENST00000542546.5	3120	8	5134	8743	5083	-7184	internal_fragment	FALSE	canonical	3	834	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGTGTGGTTAATACTATC	NA	False	NA	NA	False	NA	NA	NA	7827682	7821255	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_7821326_7827494
H1_mix_00019006	chr12	-	3827	10	FSM	ENSG00000059804.16	ENST00000075120.12	3827	10	0	0	0	0	multi-exon	FALSE	canonical	3	3105	junction_3	215.098943641189	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATGGGCTTATTTACTT	-2	True	NA	-24	True	AATAAA	-19	NA	7936187	7919229	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_7921632_7922820_7923025_7924409_7924512_7925843_7925949_7929683_7929872_7930479_7930643_7931244_7931486_7932986_7933148_7933809_7933903_7936019
H1_mix_00019007	chr12	-	4414	9	FSM	ENSG00000059804.16	ENST00000486749.5	4414	9	0	0	0	0	multi-exon	FALSE	canonical	3	3105	junction_3	207.254938119698	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTATGGGCTTATTTACT	156	False	NA	-25	True	AATAAA	-18	NA	7936167	7919230	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_7921632_7922820_7923025_7924409_7924512_7925843_7925949_7929683_7930643_7931244_7931486_7932986_7933148_7933809_7933903_7936019
H1_mix_00019008	chr12	-	2871	2	FSM	ENSG00000059804.16	ENST00000469295.1	1030	2	0	-1841	0	0	multi-exon	FALSE	canonical	3	3144	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATGGGCTTATTTACTT	NA	False	NA	-24	True	AATAAA	-19	NA	7923289	7919229	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_7921632_7922820
H1_mix_00019013	chr12	-	1417	5	NNC	ENSG00000164845.16	novel	829	7	NA	NA	-11	746	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	8.72854512504805	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTCCATAACCAAAGGGAG	NA	False	NA	NA	False	NA	NA	NA	8242959	8231765	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_8232608_8234275_8234426_8235600_8235735_8238666_8238750_8242751
H1_mix_00019014	chr12	-	662	2	FSM	ENSG00000226091.7	ENST00000420040.2	662	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGCTCCTGGATGCAG	5962	False	NA	3	True	TATAAA	-23	NA	8390752	8356962	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_8357142_8390269
H1_mix_00019015	chr12	-	1006	4	NIC	ENSG00000226091.7	novel	2157	7	NA	NA	12	10	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	9.39266853573691	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTTTCTAAAAAGAATGT	NA	False	NA	NA	False	AATAAA	-41	NA	8396791	8384094	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_8384422_8390269_8390512_8390901_8390970_8396422
H1_mix_00019018	chr12	-	246	1	FSM	ENSG00000214487.3	ENST00000439409.2	971	1	116	609	116	-609	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGACCAGTTTGTAGCCA	NA	False	NA	NA	False	NA	NA	NA	8428494	8428248	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_8428200_8428500
H1_mix_00019019	chr12	-	2450	7	FSM	ENSG00000003056.8	ENST00000000412.8	2450	7	0	0	0	0	multi-exon	FALSE	canonical	3	674	junction_2	38.903370319578	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCCTTGTCATTTGTGTG	6	True	NA	NA	False	ATTAAA	-17	NA	8949645	8940360	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_8941941_8942415_8942543_8943404_8943536_8943800_8943911_8945417_8945585_8946228_8946406_8949487
H1_mix_00019021	chr12	-	660	4	FSM	ENSG00000003056.8	ENST00000544245.1	660	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	337.058188184506	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGCAATCGACACACCCT	239	False	NA	NA	False	NA	NA	NA	8949735	8943824	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_8943911_8945417_8945585_8946228_8946388_8949487
H1_mix_00019024	chr12	-	4067	6	NNC	ENSG00000214826.5	novel	2947	27	NA	NA	25213	960	intron_retention	FALSE	canonical	3	23	junction_4	54.5013761294153	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGAGTTTTTCATTGA	NA	False	NA	NA	False	ATTAAA	-16	NA	9423016	9417712	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_9418930_9419111_9419191_9419488_9419574_9419980_9420082_9420172_9420256_9420514
H1_mix_00019028	chr12	-	6035	8	NNC	ENSG00000256667.6	novel	2353	7	NA	NA	-3667	-2	at_least_one_novel_splicesite	FALSE	non_canonical	3	56	junction_1	18.9359823767194	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTATCTGTGTGGACAG	NA	False	NA	-6	True	AATAAA	-21	NA	10603336	10588064	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_10589056_10589142_10589546_10592279_10592387_10593780_10594006_10595690_10595928_10596891_10596982_10598042_10598210_10599521
H1_mix_00019029	chr12	-	3402	5	FSM	ENSG00000111196.10	ENST00000320756.7	2606	5	18	-814	0	814	multi-exon	FALSE	canonical	3	902	junction_1	52.9404146187013	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACAGGGTGATTAGGGAA	9	True	NA	NA	False	AAGAAA	-3	NA	10613591	10603378	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_10606375_10607853_10607937_10609830_10609942_10610621_10610681_10613438
H1_mix_00019030	chr12	-	3405	6	FSM	ENSG00000111196.10	ENST00000544850.5	1057	6	-6	-2342	0	522	multi-exon	FALSE	canonical	3	43	junction_3	443.520732322628	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTAATTTGAACTGTGT	0	True	NA	83	True	AGTAAA	-39	NA	10613600	10603670	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_10606375_10607853_10607937_10609097_10609384_10609830_10609942_10610621_10610681_10613438
H1_mix_00019031	chr12	-	4491	4	FSM	ENSG00000111196.10	ENST00000537852.5	2671	4	0	-1820	0	0	multi-exon	FALSE	canonical	3	902	junction_1	61.0482504981829	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTTTTTCCAAGTACT	0	True	NA	NA	False	AATAAA	-18	NA	10613600	10604192	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_10606375_10607853_10609942_10610621_10610681_10613438
H1_mix_00019034	chr12	-	1822	9	NIC	ENSG00000060138.13	novel	1931	10	NA	NA	0	107	combination_of_known_junctions	FALSE	canonical	3	248	junction_3	1635.15226737451	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAAGTTAATGCTGTTTC	6	True	NA	75	True	AGTAAA	-18	NA	10723323	10698981	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_10699655_10701253_10701354_10701959_10702135_10704059_10704149_10713210_10713334_10715693_10715784_10718087_10718122_10719079_10719144_10722849
H1_mix_00019035	chr12	-	1906	10	NIC	ENSG00000060138.13	novel	1931	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	248	junction_3	1203.96204976899	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAATGTTTAATGGGAGTG	22	True	NA	-32	True	AATAAA	-20	NA	10723307	10699088	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_10699655_10701253_10701354_10701959_10702135_10704059_10704149_10709907_10710115_10713210_10713334_10715693_10715784_10718087_10718122_10719079_10719144_10722849
H1_mix_00019036	chr12	-	1914	10	NNC	ENSG00000060138.13	novel	1931	10	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_3	1250.03359954843	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTTTAATGGGAGTGTA	22	True	NA	-30	True	AATAAA	-22	NA	10723307	10699086	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_10699655_10701253_10701354_10701959_10702132_10704050_10704149_10709907_10710115_10713210_10713334_10715693_10715784_10718087_10718122_10719079_10719144_10722849
H1_mix_00019037	chr12	-	1710	9	FSM	ENSG00000060138.13	ENST00000279550.11	1708	9	0	-2	0	2	multi-exon	FALSE	canonical	3	331	junction_4	1263.37484540417	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTTTAATGGGAGTGTA	22	True	NA	-30	True	AATAAA	-22	NA	10723307	10699086	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_10699655_10701253_10701354_10701959_10702135_10704050_10704149_10713210_10713334_10715693_10715784_10718087_10718122_10719079_10719144_10722849
H1_mix_00019038	chr12	-	1933	10	FSM	ENSG00000060138.13	ENST00000228251.9	1931	10	0	-2	0	2	multi-exon	FALSE	canonical	3	2902	junction_3	524.543611151637	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTTTAATGGGAGTGTA	6	True	NA	-30	True	AATAAA	-22	NA	10723323	10699086	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_10699655_10701253_10701354_10701959_10702135_10704050_10704149_10709907_10710115_10713210_10713334_10715693_10715784_10718087_10718122_10719079_10719144_10722849
H1_mix_00019043	chr12	-	1619	10	FSM	ENSG00000275778.2	ENST00000536668.2	1618	10	0	-1	0	1	multi-exon	FALSE	canonical	2	6	junction_6	30.966329783281	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGATTGTTGCTTCTCTT	12	True	NA	3	True	AATAAA	-19	NA	11171598	10845847	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_10845951_10847044_10847368_10848371_10848408_10882216_10882699_10883060_10883097_10884153_10884276_10973654_10973722_11034781_11034886_11047019_11047189_11171421
H1_mix_00019045	chr12	-	3199	1	FSM	ENSG00000212127.6	ENST00000537503.2	1854	1	-1348	3	-1348	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCAAATTTTTTGCTGTT	NA	False	NA	-5	True	AATAAA	-15	NA	10940611	10937412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_10937400_10940600
H1_mix_00019046	chr12	-	473	1	FSM	ENSG00000212125.2	ENST00000390674.2	928	1	758	-303	758	303	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCATATTATCATGTTTC	NA	False	NA	NA	False	AAGAAA	-38	NA	10964594	10964121	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_10964100_10964600
H1_mix_00019047	chr12	-	657	3	Fusion	ENSG00000255837.2_ENSG00000231887.8	novel	534	3	NA	NA	0	0	multi-exon	FALSE	canonical	3	37	junction_1	36	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTAGTGTACATTTTTAT	66	False	NA	NA	False	AATAAA	-19	NA	11171544	10995960	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr12_-_10996326_11047019_11047189_11171421
H1_mix_00019049	chr12	-	7817	24	FSM	ENSG00000070018.9	ENST00000538239.5	7812	24	0	-5	0	1	multi-exon	FALSE	canonical	3	23	junction_1	58.2595067978192	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCCTTTCTTTTCAG	228	False	NA	NA	False	AATAAA	-19	NA	12244304	12116023	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_12119331_12120369_12120404_12121085_12121421_12124564_12124663_12125295_12125433_12126690_12126922_12130782_12130894_12131820_12132058_12135174_12135301_12138324_12138535_12147365_12147557_12148941_12149154_12150835_12151039_12158828_12159156_12159779_12159965_12162192_12162420_12164272_12164563_12165078_12165296_12179809_12179982_12181042_12181440_12183979_12184112_12186922_12187120_12203202_12203401_12244261
H1_mix_00019050	chr12	-	10252	23	FSM	ENSG00000070018.9	ENST00000261349.9	10252	23	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_13	43.0960152325667	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGTCCTTTCTTTTCA	-31	True	NA	NA	False	AATAAA	-18	NA	12267044	12116024	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_12121421_12124564_12124663_12125295_12125433_12126690_12126922_12130782_12130894_12131820_12132058_12135174_12135301_12138324_12138535_12147365_12147557_12148941_12149154_12150835_12151039_12158828_12159156_12159779_12159965_12162192_12162420_12164272_12164563_12165078_12165296_12179809_12179982_12181042_12181440_12183979_12184112_12186922_12187120_12203202_12203401_12244261_12244656_12266680
H1_mix_00019051	chr12	-	8499	25	NIC	ENSG00000070018.9	novel	7812	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	57.4793290139063	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGTCCTTTCTTTTCA	1	True	NA	NA	False	AATAAA	-18	NA	12267012	12116024	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_12119331_12120369_12120404_12121085_12121421_12124564_12124663_12125295_12125433_12126690_12126922_12130782_12130894_12131820_12132058_12135174_12135301_12138324_12138535_12147365_12147557_12148941_12149154_12150835_12151039_12158828_12159156_12159779_12159965_12162192_12162420_12164272_12164563_12165078_12165296_12179809_12179982_12181042_12181440_12183979_12184112_12186922_12187120_12203202_12203401_12244261_12244656_12266680
H1_mix_00019053	chr12	-	5529	4	FSM	ENSG00000111261.14	ENST00000535902.6	5532	4	0	3	0	-3	multi-exon	FALSE	canonical	3	45	junction_3	4.54606056566195	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTCGAGTATTCTATGAT	10	True	NA	NA	False	AATAAA	-22	NA	12350242	12326058	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_12330959_12338419_12338561_12343091_12343415_12350077
H1_mix_00019054	chr12	-	5660	5	FSM	ENSG00000111261.14	ENST00000396349.3	2220	5	-234	-3206	-233	-3	multi-exon	FALSE	canonical	3	6	junction_3	19.4550764583437	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTCGAGTATTCTATGAT	6528	False	NA	NA	False	AATAAA	-22	NA	12350475	12326058	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_12330959_12338419_12338561_12343091_12343174_12343275_12343415_12350077
H1_mix_00019055	chr12	-	6661	7	FSM	ENSG00000111266.9	ENST00000298573.9	6661	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_6	9.68532681717842	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAGGGGAGGCTGGGGGC	0	True	NA	NA	False	ATTAAA	-2	NA	12562863	12473281	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_12478016_12480222_12480347_12487027_12487188_12500518_12500683_12519861_12520001_12520870_12521464_12562116
H1_mix_00019058	chr12	-	1909	2	FSM	ENSG00000183150.8	ENST00000540510.1	1751	2	-161	3	-161	-3	multi-exon	FALSE	canonical	3	142	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGTCTTTGATTAATGAT	NA	False	NA	NA	False	CATAAA	-14	NA	12684682	12660893	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_12662471_12684350
H1_mix_00019059	chr12	-	1165	4	FSM	ENSG00000013583.10	ENST00000014930.9	1159	4	0	-6	0	6	multi-exon	FALSE	canonical	3	231	junction_1	6.84754619472471	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAAGTGTAATTATTTCC	-14	True	NA	-2	True	AATAAA	-29	NA	13000265	12974863	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_12975480_12987151_12987333_12989276_12989416_13000036
H1_mix_00019060	chr12	-	2378	3	FSM	ENSG00000013583.10	ENST00000536942.1	2056	3	-15	-307	-15	307	multi-exon	FALSE	canonical	3	245	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACCCTGGATTATTTTTAG	24	False	13000304	NA	False	NA	NA	NA	13000280	12985337	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_12987333_12989276_12989416_13000036
H1_mix_00019062	chr12	-	327	1	FSM	ENSG00000244573.3	ENST00000598995.1	310	1	-67	50	-67	-27	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGCCAAACAGATTGGTGA	9971	False	NA	NA	False	NA	NA	NA	14357218	14356891	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_14356900_14357200
H1_mix_00019063	chr12	-	1960	11	FSM	ENSG00000121316.11	ENST00000240617.10	1960	11	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_6	10.4809350727881	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCACTGACTTTGTTGT	476	False	14567903	-6	True	AATAAA	-23	NA	14567883	14503660	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_14503955_14506161_14506269_14506932_14507119_14511259_14511401_14511510_14511712_14535658_14535804_14536569_14536711_14540763_14540903_14542207_14542292_14553192_14553413_14567581
H1_mix_00019064	chr12	-	3002	2	Antisense	novelGene_ENSG00000214772.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	246	junction_1	0	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGGTGGTCTCTTCAC	131	False	NA	1	True	AATAAA	-24	NA	14710122	14705454	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr12_-_14708345_14710010
H1_mix_00019066	chr12	-	4626	12	FSM	ENSG00000084463.8	ENST00000261167.7	4581	12	-46	1	-38	-1	multi-exon	FALSE	canonical	3	1098	junction_3	103.796845443236	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGGGAAGGGTTATTTAT	NA	False	NA	-2	True	ATTAAA	-17	NA	14803524	14784582	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_14787499_14788950_14789134_14790455_14790750_14791168_14791271_14793730_14793923_14794536_14794737_14794970_14795105_14796806_14797004_14799634_14799729_14800751_14800784_14801319_14801429_14803351
H1_mix_00019067	chr12	-	449	4	FSM	ENSG00000084463.8	ENST00000544764.5	564	4	0	115	0	110	multi-exon	FALSE	canonical	3	1374	junction_1	38.2186690854963	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAACAGAACAGCAT	0	True	NA	NA	False	NA	NA	NA	14803486	14799555	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_14799729_14800751_14800784_14801319_14801429_14803351
H1_mix_00019069	chr12	-	1533	7	FSM	ENSG00000139055.7	ENST00000266397.7	1547	7	9	5	9	-5	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGAGAAAGGCTGGCATCT	4	True	NA	NA	False	AATAAA	-19	NA	14938528	14914043	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_14914783_14915488_14915687_14917177_14917304_14920931_14921049_14934855_14934994_14937951_14938053_14938414
H1_mix_00019070	chr12	-	3916	21	FSM	ENSG00000151491.14	ENST00000281172.10	3901	21	0	-15	0	15	multi-exon	FALSE	canonical	3	26	junction_19	5.62227711874824	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCTGAGGATTCGAGTTGA	-3	True	NA	24	True	AATAAA	-40	NA	15789388	15620118	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_15621431_15623157_15623288_15624226_15624408_15631441_15631665_15640702_15640847_15641721_15641831_15647126_15647261_15650822_15651007_15654144_15654294_15658078_15658154_15658496_15658586_15660613_15660741_15662025_15662100_15665755_15665893_15666439_15666523_15669386_15669537_15669663_15669826_15670855_15670924_15681225_15681303_15682892_15682973_15789160
H1_mix_00019072	chr12	-	2925	1	FSM	ENSG00000256238.1	ENST00000537175.1	3133	1	25	183	25	-183	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGGAGGAAGAAGCCCGA	NA	False	NA	NA	False	NA	NA	NA	16402381	16399456	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_16399500_16402400
H1_mix_00019074	chr12	-	3393	4	FSM	ENSG00000048540.16	ENST00000537304.6	3393	4	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	19.4821855949366	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATTGCACTTAATTGGC	-1	True	NA	0	True	AATAAA	-16	NA	16606162	16548371	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_16551328_16560412_16560539_16600654_16600869_16606065
H1_mix_00019075	chr12	-	1489	7	FSM	ENSG00000048540.16	ENST00000541764.5	1489	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	40.4914257041606	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGCTTTCTGTATTTAC	3169	False	NA	67	True	TTTAAA	-12	NA	16607006	16550809	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_16551328_16560412_16560539_16594136_16594335_16598791_16598968_16600654_16600869_16606065_16606133_16606816
H1_mix_00019076	chr12	-	3626	3	FSM	ENSG00000048540.16	ENST00000543721.1	3626	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	30	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGGTTACAAGTATTGT	4	True	NA	NA	False	AATAAA	-26	NA	16607122	16597615	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_16600869_16606065_16606133_16606816
H1_mix_00019077	chr12	-	302	1	FSM	ENSG00000240993.3	ENST00000481078.3	302	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	254	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATTACTTAT	NA	False	NA	NA	False	NA	NA	NA	19176589	19176287	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_19176300_19176600
H1_mix_00019078	chr12	-	383	1	FSM	ENSG00000200247.1	ENST00000363377.1	107	1	38	-314	38	314	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGACGTTACTAGCTATT	NA	False	NA	NA	False	NA	NA	NA	19446017	19445634	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_19445600_19446000
H1_mix_00019079	chr12	-	554	1	FSM	ENSG00000245205.3	ENST00000359165.5	1405	1	423	428	423	-428	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGCAATGATGCTGGTG	485	False	NA	NA	False	NA	NA	NA	19457225	19456671	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_19456700_19457200
H1_mix_00019081	chr12	-	3615	16	NIC	ENSG00000004700.16	novel	3745	15	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	18	junction_15	84.9821942134547	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTATGTTTTTATATTT	0	True	NA	-1	True	AATAAA	-23	NA	21501595	21468909	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_21470347_21470968_21471099_21471427_21471648_21473550_21473643_21474840_21474980_21475467_21475586_21475675_21475825_21476910_21476993_21477802_21477970_21483375_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501169_21501373_21501462
H1_mix_00019082	chr12	-	3491	15	NIC	ENSG00000004700.16	novel	3745	15	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_14	82.8257329627473	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTATGTTTTTATATTT	-29	True	NA	-1	True	AATAAA	-23	NA	21501624	21468909	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_21470347_21470968_21471099_21471427_21471648_21473550_21473643_21474840_21474980_21475467_21475586_21475675_21475825_21476910_21476993_21477802_21477970_21483375_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501412
H1_mix_00019083	chr12	-	3745	15	FSM	ENSG00000004700.16	ENST00000444129.7	3745	15	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_14	30.2358923082066	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTATGTTTTTATATTT	-40	True	NA	-1	True	AATAAA	-23	NA	21501635	21468909	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_21470347_21470968_21471099_21471427_21471648_21473550_21473643_21474840_21474980_21475467_21475586_21475675_21475825_21476910_21476993_21477802_21477970_21483375_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501169
H1_mix_00019084	chr12	-	2572	16	FSM	ENSG00000004700.16	ENST00000421138.6	2572	16	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_15	65.255055146879	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCAAGGATGTCCAATCT	44	True	NA	NA	False	NA	NA	NA	21501551	21469801	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_21470347_21470968_21471099_21471427_21471648_21473550_21473643_21474840_21474980_21475467_21475586_21475675_21475825_21476910_21476993_21477802_21477970_21483375_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501169_21501216_21501412
H1_mix_00019085	chr12	-	928	7	FSM	ENSG00000004700.16	ENST00000396093.7	932	7	4	0	-2	0	multi-exon	FALSE	canonical	3	39	junction_6	110.853882806753	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTACTCGAATTGCTGTG	NA	False	NA	NA	False	AAAAAG	-45	NA	21501665	21483441	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501169_21501216_21501462
H1_mix_00019089	chr12	-	672	2	FSM	ENSG00000111716.14	ENST00000542765.4	672	2	0	0	0	0	multi-exon	FALSE	canonical	3	12560	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTTCTGGGATTCCT	7049	False	NA	-14	True	AATAAA	-19	NA	21637374	21635341	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_21635710_21637070
H1_mix_00019090	chr12	-	1303	8	FSM	ENSG00000111716.14	ENST00000350669.5	1303	8	0	0	0	0	multi-exon	FALSE	canonical	3	9895	junction_2	1104.73640775175	1450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTTCTGGGATTCCT	-2	True	NA	-14	True	AATAAA	-19	NA	21657842	21635341	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_21635710_21637070_21637195_21638352_21638471_21641951_21642126_21643934_21644109_21646898_21647017_21654542_21654678_21657750
H1_mix_00019091	chr12	-	1586	8	FSM	ENSG00000111716.14	ENST00000396076.5	1538	8	-48	0	0	0	multi-exon	TRUE	canonical	3	177	junction_7	3915.96255011173	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTTCTGGGATTCCT	-2	True	NA	-14	True	AATAAA	-19	NA	21657842	21635341	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_21635710_21637070_21637195_21638352_21638471_21641951_21642126_21643934_21644109_21646898_21647017_21654542_21654678_21657467
H1_mix_00019092	chr12	-	2246	3	FSM	ENSG00000121361.5	ENST00000240662.3	2274	3	0	28	0	1	multi-exon	FALSE	canonical	2	6	junction_1	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATTTTATTAAAACATTT	3	True	NA	NA	False	NA	NA	NA	21774706	21764982	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_21766624_21773242_21773687_21774545
H1_mix_00019093	chr12	-	9707	5	FSM	ENSG00000111728.11	ENST00000396037.9	9707	5	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_3	3.03108891324554	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTGAAGTCTTTTCATT	-8	True	NA	-7	True	AATAAA	-14	NA	22334707	22193390	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_22202039_22249005_22249099_22255279_22255390_22287148_22287294_22333996
H1_mix_00019094	chr12	-	4436	25	FSM	ENSG00000111731.13	ENST00000333957.8	4436	25	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_17	19.7102271817337	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAATATTCCTAAATCTC	-35	True	NA	-35	True	AATAAA	-18	NA	22544546	22448582	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_22449892_22453895_22454043_22456970_22457162_22469708_22469796_22470823_22470912_22471398_22471489_22471966_22472066_22472285_22472348_22472743_22472808_22474750_22474892_22478312_22478478_22482556_22482744_22484696_22484889_22490122_22490219_22493222_22493338_22506710_22506820_22513293_22513380_22517985_22518138_22523425_22523625_22524471_22524628_22525609_22525706_22527720_22527893_22535257_22535345_22544060_22544180_22544319
H1_mix_00019095	chr12	-	4585	27	FSM	ENSG00000111731.13	ENST00000446597.6	4585	27	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	43.0623601757419	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAATATTCCTAAATCTC	-31	True	NA	-35	True	AATAAA	-18	NA	22544542	22448582	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_22449892_22453895_22454043_22456970_22457162_22458483_22458586_22459491_22459543_22469708_22469796_22470823_22470912_22471398_22471489_22471966_22472066_22472285_22472348_22472743_22472808_22474750_22474892_22478312_22478478_22482556_22482744_22484696_22484889_22490122_22490219_22493222_22493338_22506710_22506820_22513293_22513380_22517985_22518138_22523425_22523625_22524471_22524628_22525609_22525706_22527720_22527893_22535257_22535345_22544060_22544180_22544319
H1_mix_00019096	chr12	-	4565	24	ISM	ENSG00000111731.13	ENST00000333957.8	4436	25	11	0	7	0	intron_retention	FALSE	canonical	3	116	junction_17	19.8026176879923	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAATATTCCTAAATCTC	-24	True	NA	-35	True	AATAAA	-18	NA	22544535	22448582	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_22449892_22453895_22454043_22456970_22457162_22469708_22469796_22470823_22470912_22471398_22471489_22471966_22472066_22472285_22472348_22472743_22472808_22474750_22474892_22478312_22478478_22482556_22482744_22484696_22484889_22490122_22490219_22493222_22493338_22506710_22506820_22513293_22513380_22517985_22518138_22523425_22523625_22524471_22524628_22525609_22525706_22527720_22527893_22535257_22535345_22544060
H1_mix_00019099	chr12	-	11684	11	FSM	ENSG00000060982.15	ENST00000261192.12	9314	11	-2370	0	-2370	0	multi-exon	FALSE	canonical	3	577	junction_7	58.9882191628125	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTGACTGTTTGTATCC	585	False	NA	-7	True	AATAAA	-16	NA	24951471	24810023	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_24818050_24829822_24829898_24832722_24832864_24836510_24836597_24842081_24842225_24849785_24849950_24878529_24878650_24881300_24881412_24894274_24894476_24901813_24901886_24948926
H1_mix_00019100	chr12	-	9344	11	FSM	ENSG00000060982.15	ENST00000539282.5	1811	11	-74	-7459	-74	2	multi-exon	FALSE	canonical	3	70	junction_10	200.0416206693	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGACTGTTTGTATCCCA	6676	False	24903172	-5	True	AATAAA	-18	NA	24903149	24810021	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_24818050_24829822_24829898_24832722_24832864_24836510_24836597_24842081_24842225_24849785_24849950_24878529_24878650_24881300_24881412_24894274_24894476_24901813_24901886_24902946
H1_mix_00019102	chr12	-	670	5	FSM	ENSG00000060982.15	ENST00000612790.1	675	5	0	5	0	-5	multi-exon	FALSE	canonical	3	577	junction_4	47.2460315793824	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAGCCTAGTGTTGAAAT	5662	False	NA	NA	False	AATAAA	-16	NA	24881398	24836451	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_24836597_24842081_24842225_24849785_24849950_24878529_24878650_24881300
H1_mix_00019103	chr12	-	5394	5	FSM	ENSG00000133703.14	ENST00000311936.8	5306	5	0	-88	0	88	multi-exon	FALSE	canonical	3	659	junction_1	52.6515669282501	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGAATCTTTTATGCAGC	-15	True	NA	84	True	NA	NA	NA	25250929	25205157	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_25209912_25225613_25225774_25227233_25227413_25245273_25245396_25250750
H1_mix_00019104	chr12	-	5518	6	FSM	ENSG00000133703.14	ENST00000256078.10	5430	6	0	-88	0	88	multi-exon	FALSE	canonical	3	114	junction_2	305.011868621534	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGAATCTTTTATGCAGC	-15	True	NA	84	True	NA	NA	NA	25250929	25205157	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_25209912_25215436_25215561_25225613_25225774_25227233_25227413_25245273_25245396_25250750
H1_mix_00019105	chr12	-	463	1	FSM	ENSG00000278743.1	ENST00000622671.1	572	1	35	74	35	-74	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGATGATCTTGGCGTTC	-4	True	NA	-8	True	AATAAA	-15	NA	25386206	25385743	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_25385700_25386200
H1_mix_00019106	chr12	-	2821	9	NIC	ENSG00000152936.11	novel	1285	8	NA	NA	-23	1197	combination_of_known_junctions	FALSE	canonical	2	9	junction_8	6.7256505261573	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCCAGCTGTCTCCAT	-2	True	NA	-7	True	AATAAA	-26	NA	25630773	25496315	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_25497795_25503737_25503801_25518794_25518968_25519857_25520076_25526098_25526219_25526768_25526956_25546373_25546555_25549325_25549547_25630594
H1_mix_00019107	chr12	-	3560	4	FSM	ENSG00000246695.9	ENST00000670839.1	3560	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	17.326921891156	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGCACCTTTGCACTCT	1222	False	NA	NA	False	NA	NA	NA	25958541	25952448	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_25955242_25956226_25956348_25956638_25956762_25958018
H1_mix_00019108	chr12	-	12579	57	FSM	ENSG00000123104.12	ENST00000381340.8	12564	57	0	-15	0	15	multi-exon	TRUE	canonical	3	25	junction_35	12.1581704912325	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTAAAGTGCTTTATTC	-16	True	NA	-9	True	AATAAA	-31	NA	26833194	26335336	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_26339484_26340166_26340329_26387433_26387595_26398875_26399042_26400127_26400259_26411319_26411413_26415302_26415499_26419048_26419214_26427912_26428089_26436220_26436347_26439126_26439320_26443542_26443651_26475295_26475419_26476911_26477008_26481130_26481242_26483697_26483899_26486103_26486361_26487067_26487252_26494152_26494341_26495151_26495261_26550246_26550356_26556232_26556376_26561761_26561953_26578712_26578834_26580026_26580156_26595464_26595591_26596882_26597135_26599144_26599346_26599986_26600110_26602369_26602496_26602616_26602707_26621122_26621297_26622239_26622406_26624298_26624357_26628032_26628163_26631865_26632060_26653975_26654127_26655707_26655853_26656296_26656549_26657706_26657893_26658010_26658131_26659112_26659286_26663684_26663847_26665909_26666052_26681873_26682035_26682573_26682674_26686480_26686633_26695605_26695651_26711172_26711269_26715298_26715446_26715751_26715836_26716143_26716243_26722396_26722556_26724655_26724743_26725649_26725766_26790156_26790228_26832689
H1_mix_00019110	chr12	-	2634	17	FSM	ENSG00000064102.15	ENST00000261191.12	2634	17	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_15	22.916884468662	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGGAGAATTACTTTAGA	17	True	NA	-19	True	AATAAA	-27	NA	26937981	26905180	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_26905537_26906301_26906438_26911177_26911318_26913456_26913688_26913973_26914129_26914407_26914579_26916001_26916181_26917351_26917442_26917643_26917734_26922615_26922701_26924354_26924484_26925760_26925852_26928204_26928286_26928702_26928906_26934555_26934631_26936578_26936815_26937795
H1_mix_00019113	chr12	-	4123	11	NIC	ENSG00000064115.11	novel	4315	12	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_3	115.726228660576	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCTAAAAAGCCTCATTAAA	9	True	NA	-5	True	AATAAA	-19	NA	27014345	26971578	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_26974228_26975495_26975659_26976259_26976358_26980565_26980647_26982772_26982860_26990449_26990628_26995236_26995409_26996741_26996863_26999525_26999677_27003235_27003391_27014077
H1_mix_00019114	chr12	-	3948	10	NIC	ENSG00000064115.11	novel	4315	12	NA	NA	2	-22	combination_of_known_junctions	FALSE	canonical	3	25	junction_9	129.266401161074	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATCCCTATTTTGAAAAA	9	True	NA	-27	True	GATAAA	-22	NA	27014345	26971600	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_26974228_26975495_26975659_26976259_26976358_26979783_26979937_26980565_26980647_26982772_26982860_26990449_26990628_26995236_26995409_26996741_26996863_27014077
H1_mix_00019115	chr12	-	4110	11	NIC	ENSG00000064115.11	novel	4315	12	NA	NA	12	-1	combination_of_known_junctions	FALSE	canonical	3	38	junction_10	122.562473865372	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGCTAAAAAGCCTCATTAA	19	True	NA	-6	True	AATAAA	-18	NA	27014335	26971579	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_26974228_26975495_26975659_26976259_26976358_26979783_26979937_26980565_26980647_26982772_26982860_26990449_26990628_26995236_26995409_26996741_26996863_26999525_26999677_27014077
H1_mix_00019116	chr12	-	666	6	FSM	ENSG00000064115.11	ENST00000545344.5	666	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	153.905685405056	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACCGTTCTTCCCTCCCCA	NA	False	NA	NA	False	NA	NA	NA	26990546	26974153	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_26974228_26975495_26975659_26976259_26976358_26979783_26979937_26980565_26980647_26990449
H1_mix_00019126	chr12	-	9005	20	FSM	ENSG00000133687.16	ENST00000551659.5	4228	20	0	-4777	0	18	multi-exon	FALSE	canonical	3	74	junction_13	16.10921864051	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAAGTACTTCATGGTTA	861	False	NA	-8	True	ATTAAA	-23	NA	29783897	29500821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_29506987_29512042_29512121_29514481_29514605_29516348_29516487_29517426_29517572_29518471_29518608_29520617_29520721_29536208_29536318_29556856_29557001_29572104_29572219_29583406_29583575_29604177_29604300_29633146_29633337_29659879_29659984_29660803_29660886_29751665_29751873_29755708_29755886_29758703_29758778_29767897_29768076_29783449
H1_mix_00019127	chr12	-	8864	18	FSM	ENSG00000133687.16	ENST00000539277.6	8846	18	0	-18	0	18	multi-exon	FALSE	canonical	3	32	junction_13	22.6718733418844	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAAGTACTTCATGGTTA	-17	True	NA	-8	True	ATTAAA	-23	NA	29783942	29500821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_29506987_29512042_29512121_29514481_29514605_29516348_29516487_29517426_29517572_29518471_29518608_29520617_29520721_29536208_29536318_29556856_29557001_29572104_29572219_29583406_29583575_29604177_29604300_29633146_29633337_29751665_29751873_29755708_29755886_29758703_29758778_29767897_29768076_29783449
H1_mix_00019128	chr12	-	3614	19	NIC	ENSG00000133687.16	novel	4228	20	NA	NA	-32	-1	combination_of_known_splicesites	FALSE	canonical	3	17	junction_10	26.8303425984578	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCTACTTTATTATCTT	928	False	NA	2	True	ATTAAA	-18	NA	29783830	29505977	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_29506987_29512042_29512121_29514481_29514605_29516348_29516487_29517426_29517572_29518471_29518608_29520617_29520721_29536208_29536318_29556856_29557001_29572104_29572219_29604177_29604300_29633146_29633337_29659879_29659984_29660803_29660886_29751665_29751873_29755708_29755886_29758703_29758778_29767897_29768076_29783449
H1_mix_00019129	chr12	-	5208	25	FSM	ENSG00000133704.10	ENST00000256079.9	5208	25	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_13	25.7859444379211	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAACTTTTGTGTGTGA	11	True	NA	-11	True	AATAAA	-21	NA	30695869	30628987	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_30630958_30631894_30632012_30634082_30634287_30636981_30637188_30639514_30639736_30649136_30649233_30652191_30652290_30652966_30653093_30656683_30656751_30661140_30661267_30662326_30662488_30663488_30663655_30665219_30665310_30665728_30665846_30666174_30666252_30669182_30669283_30670961_30671097_30673989_30674075_30674658_30674754_30676497_30676588_30680481_30680639_30681658_30681818_30684300_30684458_30690495_30690578_30695563
H1_mix_00019130	chr12	-	450	2	FSM	ENSG00000133704.10	ENST00000611458.4	426	2	0	-24	0	24	multi-exon	FALSE	canonical	3	236	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAACAGGTTCACAGAAAT	NA	False	NA	NA	False	TTTAAA	-12	NA	30681817	30680347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_30680639_30681658
H1_mix_00019132	chr12	-	3223	16	FSM	ENSG00000110888.18	ENST00000548676.5	3221	16	0	-2	0	1	multi-exon	FALSE	canonical	3	26	junction_4	38.1325174737899	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGTTCCTATTTAATT	3820	False	NA	-4	True	AATAAA	-16	NA	30751124	30709550	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_30710471_30711565_30711630_30713784_30713886_30714958_30715145_30716507_30716677_30719078_30719226_30720810_30720916_30723258_30723315_30724369_30724452_30725965_30726089_30728647_30729326_30730238_30730283_30731342_30731511_30734967_30735207_30741019_30741107_30751070
H1_mix_00019134	chr12	-	3670	18	NIC	ENSG00000110888.18	novel	3535	18	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_4	43.8648443229205	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCAGTGTTCCTATTTAA	11	True	NA	-6	True	AATAAA	-14	NA	30754933	30709552	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_30710515_30711565_30711630_30713784_30713886_30714958_30715142_30716507_30716677_30719078_30719226_30720810_30720916_30723258_30723315_30724369_30724452_30725965_30726089_30728647_30729326_30730238_30730283_30731342_30731511_30734967_30735207_30741019_30741107_30751070_30751134_30753343_30753560_30754750
H1_mix_00019135	chr12	-	5182	18	NIC	ENSG00000110888.18	novel	3535	18	NA	NA	-46	0	intron_retention	FALSE	canonical	3	49	junction_17	40.7864724164757	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTCAGTGTTCCTATTTA	NA	False	NA	-7	True	AATAAA	-13	NA	30754997	30709553	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_30710515_30711565_30711630_30713784_30713886_30714958_30716677_30719078_30719226_30720810_30720916_30723258_30723315_30724369_30724452_30725965_30726089_30728647_30729326_30730238_30730283_30731342_30731511_30733628_30733712_30734967_30735207_30741019_30741107_30751070_30751134_30753343_30753560_30754750
H1_mix_00019136	chr12	-	6267	17	NIC	ENSG00000110888.18	novel	4484	18	NA	NA	0	-4	intron_retention	FALSE	canonical	3	76	junction_13	31.241436326616	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCACCTTCAGTGTTCCTA	5	True	NA	-11	True	AATAAA	-9	NA	30754939	30709557	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_30710471_30711565_30711630_30713784_30713886_30714958_30716677_30719078_30719226_30720810_30720916_30723258_30723315_30724369_30724452_30725965_30726089_30728647_30729326_30730238_30730283_30731342_30731511_30733628_30733712_30734967_30735207_30741019_30741107_30751070_30751134_30753343
H1_mix_00019142	chr12	-	2032	3	FSM	ENSG00000245614.5	ENST00000500527.1	2031	3	0	-1	0	0	multi-exon	FALSE	canonical	3	7	junction_1	5.5	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTGTTTATAGTTTGT	NA	False	NA	0	True	AATAAA	-24	NA	31073847	31020761	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_31022030_31060659_31060771_31073194
H1_mix_00019143	chr12	-	2158	2	FSM	ENSG00000245614.5	ENST00000669174.1	3188	2	-305	1335	-244	-6	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTATTTGATTGTTTAT	NA	False	NA	-7	True	AATAAA	-17	NA	31074091	31020768	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_31022030_31073194
H1_mix_00019145	chr12	-	616	1	FSM	ENSG00000243517.1	ENST00000495623.1	606	1	6	-16	6	16	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTAATTCCTCAAAAAATA	NA	False	NA	NA	False	AATAAA	-4	NA	31252591	31251975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_31252000_31252600
H1_mix_00019146	chr12	-	492	1	FSM	ENSG00000275097.1	ENST00000622889.1	474	1	0	-18	0	18	mono-exon	FALSE	NA	NA	NA	NA	NA	311	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTGGATAAGATGGATTTA	6872	False	NA	18	True	AATAAA	-34	NA	31280895	31280403	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_31280400_31280900
H1_mix_00019147	chr12	-	2941	6	FSM	ENSG00000139146.14	ENST00000337682.9	2941	6	0	0	0	0	multi-exon	FALSE	canonical	3	2685	junction_5	221.244118565895	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGCTGTTTTGTGGCTTTG	0	True	NA	-34	True	AATAAA	-24	NA	31326150	31280583	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_31282872_31287633_31287785_31293804_31293932_31295233_31295334_31298076_31298225_31326023
H1_mix_00019152	chr12	-	9560	21	FSM	ENSG00000170456.16	ENST00000389082.10	9506	21	-53	-1	-53	1	multi-exon	FALSE	canonical	2	8	junction_5	22.9410113116227	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTGCTTCATTGTTG	NA	False	NA	-13	True	AATAAA	-17	NA	31591189	31382224	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_31387787_31389323_31389499_31392266_31392394_31392613_31392697_31398174_31398363_31399653_31399773_31402497_31402644_31409262_31409385_31413435_31413565_31415366_31415449_31423596_31423676_31424534_31424688_31426292_31426425_31433154_31433249_31442774_31442926_31447537_31447770_31451939_31452477_31460193_31460382_31479588_31480256_31495809_31495920_31590705
H1_mix_00019153	chr12	-	3010	9	FSM	ENSG00000170456.16	ENST00000354285.8	3132	9	0	122	0	-122	multi-exon	FALSE	canonical	3	17	junction_3	24.7537875889731	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATGCCCAGCCTGATTG	-18	True	NA	NA	False	NA	NA	NA	31591012	31432496	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_31433249_31442774_31442926_31447537_31447770_31451939_31452477_31460193_31460382_31479588_31480256_31495809_31495920_31499605_31499672_31590705
H1_mix_00019155	chr12	-	2767	6	ISM	ENSG00000170456.16	ENST00000354285.8	3132	9	-161	18834	-37	493	5prime_fragment	FALSE	canonical	3	44	junction_5	17.5088549025914	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACTCCTTTTTGAAGAAA	-4	True	NA	92	True	NA	NA	NA	31591173	31451208	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_31452477_31460193_31460382_31479588_31480256_31495809_31495920_31499605_31499672_31590705
H1_mix_00019158	chr12	-	1952	7	FSM	ENSG00000151743.11	ENST00000281471.11	1952	7	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_5	25.8886504519301	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAATCACATTTTCCCCTT	1	True	NA	-5	True	AATAAA	-25	NA	31729021	31671141	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_31672378_31689006_31689119_31697360_31697418_31697739_31697958_31701862_31702008_31709292_31709426_31728970
H1_mix_00019161	chr12	-	276	1	FSM	ENSG00000256843.1	ENST00000540596.1	141	1	1	-136	1	136	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATCCTCCCGCCTCTGCCT	8850	False	NA	NA	False	NA	NA	NA	31748239	31747963	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_31748000_31748200
H1_mix_00019162	chr12	-	1174	1	FSM	ENSG00000188375.5	ENST00000340398.5	1114	1	63	-123	63	123	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACCACATGTTAACTAACC	62	False	NA	NA	False	AGTAAA	-38	NA	31792235	31791061	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_31791100_31792200
H1_mix_00019163	chr12	-	493	1	FSM	ENSG00000276148.1	ENST00000612009.1	413	1	-88	8	-88	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATACAATTTTAGTTCTT	1760	False	NA	-20	True	AATAAA	-6	NA	32725748	32725255	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_32725300_32725700
H1_mix_00019164	chr12	-	2358	5	FSM	ENSG00000139131.13	ENST00000324868.13	2117	5	0	-241	0	241	multi-exon	FALSE	canonical	3	272	junction_4	8.1967981553775	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAAGTAGTTTCTTTACAA	-7	True	NA	NA	False	AAAAAG	-43	NA	32755897	32746302	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_32747364_32749936_32750108_32750718_32750875_32753917_32754086_32755095
H1_mix_00019165	chr12	-	4229	13	FSM	ENSG00000057294.16	ENST00000340811.9	4229	13	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_8	21.0256126875982	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGACCAAAGTAGTGTTGC	12	True	NA	-12	True	AATAAA	-26	NA	32896777	32790754	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_32792493_32792643_32792732_32796108_32796299_32802402_32802557_32821355_32821530_32822466_32822632_32824044_32824163_32841027_32841206_32850765_32850974_32868926_32869063_32877845_32878544_32878919_32879033_32896508
H1_mix_00019166	chr12	-	1930	2	FSM	ENSG00000057294.16	ENST00000546741.2	1563	2	-328	-39	-152	39	multi-exon	FALSE	canonical	3	49	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAGCTCCAGGGCCCTGG	NA	False	NA	NA	False	AAGAAA	-33	NA	32896929	32893269	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_32894779_32896508
H1_mix_00019168	chr12	-	7874	7	FSM	ENSG00000110975.8	ENST00000228567.7	4461	7	-105	-3308	-105	3308	multi-exon	FALSE	canonical	1	4	junction_5	4.71404520791032	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTCTGTGTTTATAGA	NA	False	NA	NA	False	AATAAA	-14	NA	33439924	33370929	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_33376902_33379831_33379962_33382348_33382521_33385170_33385292_33406788_33407357_33426137_33426496_33439371
H1_mix_00019169	chr12	-	1910	1	FSM	ENSG00000259937.2	ENST00000561632.2	1025	1	-892	7	-892	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCATATGCCTTGTATATT	NA	False	NA	NA	False	AATAAA	-24	NA	33406788	33404878	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_33404900_33406800
H1_mix_00019170	chr12	-	544	1	FSM	ENSG00000273853.1	ENST00000614876.1	543	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGGTACTACGTTTTAT	6996	False	NA	NA	False	AATAAA	-20	NA	33432853	33432309	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_33432300_33432900
H1_mix_00019171	chr12	-	3431	20	FSM	ENSG00000139117.14	ENST00000331366.10	3431	20	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_12	3.35936282047009	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTCTTGTCAAACATC	0	True	NA	-13	True	AATAAA	-15	NA	38905591	38652202	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_38654071_38670728_38670803_38675716_38675775_38677451_38677555_38685489_38685618_38693656_38693839_38702874_38702922_38723771_38723834_38724845_38724900_38730282_38730359_38760846_38760889_38762111_38762217_38767634_38767739_38776237_38776302_38829378_38829456_38839915_38839956_38848558_38848663_38873003_38873051_38874470_38874512_38905436
H1_mix_00019172	chr12	-	6589	34	NIC	ENSG00000139116.19	novel	6601	37	NA	NA	-165	2	combination_of_known_junctions	TRUE	canonical	3	42	junction_11	15.7256085999945	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTGTATTGTTCTTTTT	32	False	NA	0	True	AATAAA	-21	NA	39443555	39293225	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_39294518_39301479_39301680_39302964_39303136_39304820_39304939_39307564_39307730_39309585_39309767_39311416_39311554_39319905_39320014_39322667_39322883_39325838_39325894_39326263_39326325_39330241_39330263_39330745_39330912_39331689_39331792_39332213_39332409_39332590_39332745_39332892_39333108_39333211_39333281_39337095_39337204_39340164_39340365_39340905_39341095_39341504_39341623_39342033_39342125_39351776_39351981_39356831_39356896_39357247_39357438_39358177_39358374_39363097_39363214_39366349_39366518_39367029_39367165_39367882_39368033_39369728_39369912_39370038_39370262_39442926
H1_mix_00019173	chr12	-	6697	34	FSM	ENSG00000139116.19	ENST00000544797.6	5040	34	-496	-1161	-165	2	multi-exon	FALSE	canonical	3	24	junction_7	18.0478905818278	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTGTATTGTTCTTTTT	32	False	NA	0	True	AATAAA	-21	NA	39443555	39293225	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_39294518_39301479_39301680_39302964_39303136_39304820_39304939_39307564_39307730_39309585_39309767_39311416_39311554_39318072_39318202_39319905_39320014_39322667_39322883_39325838_39325894_39326263_39326325_39330745_39330912_39331689_39331792_39332213_39332409_39332590_39332745_39332892_39333108_39333211_39333281_39337095_39337204_39340164_39340365_39340905_39341095_39341504_39341623_39342033_39342125_39351776_39351981_39356831_39356896_39357247_39357438_39358177_39358374_39363097_39363214_39366349_39366518_39367029_39367165_39367882_39368033_39369728_39369912_39370038_39370262_39442926
H1_mix_00019174	chr12	-	6528	33	NIC	ENSG00000139116.19	novel	5040	34	NA	NA	-126	1	combination_of_known_junctions	FALSE	canonical	3	46	junction_22	14.915091717368	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTACTGTATTGTTCTTTT	71	False	NA	-1	True	AATAAA	-20	NA	39443516	39293226	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_39294518_39301479_39301680_39302964_39303136_39304820_39304939_39307564_39307730_39309585_39309767_39311416_39311554_39319905_39320014_39322667_39322883_39325838_39325894_39326263_39326325_39330745_39330912_39331689_39331792_39332213_39332409_39332590_39332745_39332892_39333108_39333211_39333281_39337095_39337204_39340164_39340365_39340905_39341095_39341504_39341623_39342033_39342125_39351776_39351981_39356831_39356896_39357247_39357438_39358177_39358374_39363097_39363214_39366349_39366518_39367029_39367165_39367882_39368033_39369728_39369912_39370038_39370262_39442926
H1_mix_00019175	chr12	-	7225	10	FSM	ENSG00000151229.13	ENST00000280871.9	7221	10	0	-4	0	4	multi-exon	FALSE	canonical	3	29	junction_2	8.62525719781127	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCCTTGCACTTATTTAT	-14	True	NA	0	True	AATAAA	-27	NA	40106081	39755020	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_39760253_39764459_39764613_39764736_39764859_39830102_39830229_39864761_39864883_39871797_39871962_39951256_39951366_40028300_40028510_40048050_40048211_40105252
H1_mix_00019176	chr12	-	1001	3	FSM	ENSG00000151229.13	ENST00000465517.1	1026	3	0	25	0	-25	multi-exon	FALSE	canonical	3	38	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTGCCTCAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	39871881	39829432	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_39830229_39864761_39864883_39871797
H1_mix_00019178	chr12	-	7492	8	FSM	ENSG00000151233.11	ENST00000398675.8	7492	8	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_7	31.6305200070813	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGTCTGGATTATTTT	12	True	NA	NA	False	AATAAA	-33	NA	42144874	42081844	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_42087948_42097441_42097615_42097909_42098034_42105817_42106070_42109565_42109692_42118999_42119172_42129758_42129852_42144425
H1_mix_00019179	chr12	-	7528	7	FSM	ENSG00000151233.11	ENST00000280876.6	1937	7	-291	-5300	-129	0	multi-exon	FALSE	canonical	3	72	junction_6	13.6065752079239	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGTCTGGATTATTTT	NA	False	NA	NA	False	AATAAA	-33	NA	42145003	42081844	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_42087948_42097441_42097615_42097909_42098034_42105817_42106070_42109565_42109692_42118999_42119172_42144425
H1_mix_00019180	chr12	-	4099	4	FSM	ENSG00000015153.15	ENST00000534854.7	4096	4	0	-3	0	3	multi-exon	FALSE	canonical	3	39	junction_1	3.39934634239519	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGTATTCTGT	-13	True	NA	NA	False	AATAAA	-21	NA	42238248	42157100	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_42160827_42161612_42161766_42237598_42237725_42238154
H1_mix_00019181	chr12	-	1805	8	FSM	ENSG00000139168.9	ENST00000266529.8	1808	8	0	3	0	-3	multi-exon	FALSE	canonical	3	497	junction_3	36.5155823601657	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTATAAAATCTTGTGTT	9	True	NA	NA	False	ATTAAA	-16	NA	42326094	42312088	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_42313199_42313689_42313766_42313873_42313987_42317339_42317448_42317786_42317899_42322417_42322447_42324018_42324105_42325923
H1_mix_00019185	chr12	-	5634	8	FSM	ENSG00000139174.12	ENST00000639589.1	5761	8	137	-10	-1	4	multi-exon	FALSE	canonical	3	32	junction_7	33.8990096779074	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTATTCTCACATTACTAC	8	True	NA	1	True	AATAAA	-20	NA	42484307	42456752	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_42460666_42464394_42465259_42466193_42466381_42468625_42468830_42469449_42469588_42470245_42470360_42472384_42472565_42484273
H1_mix_00019186	chr12	-	4243	9	FSM	ENSG00000139174.12	ENST00000455697.6	4277	9	34	0	-1	0	multi-exon	FALSE	canonical	3	10	junction_8	40.3081877538547	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTAATAAATAACAAAACTA	8	True	NA	NA	False	AATAAA	-3	NA	42484307	42458371	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_42460666_42464394_42465259_42466193_42466381_42468625_42468830_42469449_42469588_42470245_42470360_42472384_42472565_42483757_42483986_42484273
H1_mix_00019187	chr12	-	4243	8	FSM	ENSG00000139174.12	ENST00000552240.6	3311	8	-49	-883	-49	0	multi-exon	FALSE	canonical	3	73	junction_7	20.7256126666539	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTAGGGAGGCATTTAAT	271	False	NA	NA	False	ACTAAA	-21	NA	42484044	42458396	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_42460666_42464394_42465259_42466193_42466381_42468625_42468830_42469449_42469588_42470245_42470360_42472384_42472565_42483757
H1_mix_00019188	chr12	-	3844	9	NNC	ENSG00000139174.12	novel	4277	9	NA	NA	2	177	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_7	51.4684369298311	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATTCCTTCCCTCCCA	19	False	NA	NA	False	NA	NA	NA	42484296	42458647	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_42460666_42464394_42465259_42466193_42466381_42468625_42468830_42469449_42469588_42470245_42470360_42472384_42472565_42483869_42483986_42484273
H1_mix_00019189	chr12	-	273	1	FSM	ENSG00000240759.1	ENST00000486977.1	252	1	0	-21	0	21	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGTGGGAAACTCAATAAA	32	False	NA	NA	False	ACTAAA	-18	NA	42679124	42678851	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_42678900_42679100
H1_mix_00019191	chr12	-	4364	9	FSM	ENSG00000129317.15	ENST00000416848.6	4364	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	13.683361246419	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATATTGTAGTACCATT	14	True	NA	-11	True	AATAAA	-20	NA	43758758	43728606	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_43730703_43731704_43731759_43736380_43736662_43738309_43738392_43742456_43742556_43746045_43746239_43748449_43748610_43754335_43755262_43758285
H1_mix_00019193	chr12	-	566	6	FSM	ENSG00000129317.15	ENST00000547156.1	566	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	16.3046005777511	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATCCTGTAAATAGAGC	13	True	NA	NA	False	CATAAA	-26	NA	43758759	43738352	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_43738392_43742456_43742556_43746045_43746239_43748449_43748610_43755216_43755262_43758729
H1_mix_00019194	chr12	-	3246	9	FSM	ENSG00000151239.14	ENST00000547459.5	3320	9	78	-4	65	2	multi-exon	FALSE	canonical	0	0	junction_8	57.7990862817052	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTATGTTCTGTTGGTTT	431	False	NA	0	True	AATAAA	-19	NA	43806184	43793720	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_43795756_43796975_43797098_43797301_43797453_43797707_43797834_43799397_43799503_43800434_43800531_43802285_43802465_43804494_43804573_43805830
H1_mix_00019195	chr12	-	2987	9	FSM	ENSG00000151239.14	ENST00000395510.7	2987	9	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_5	8.30662386291807	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTATGTTCTGTTGGT	4	True	NA	-2	True	AATAAA	-17	NA	43806317	43793722	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_43795756_43796975_43797098_43797301_43797453_43797707_43797834_43799397_43799503_43800434_43800531_43802285_43802465_43804494_43804573_43806220
H1_mix_00019198	chr12	-	3556	20	FSM	ENSG00000184613.11	ENST00000429094.7	3553	20	0	-3	0	0	multi-exon	FALSE	canonical	3	160	junction_9	19.5107754871713	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGAGTCTGAGTATCTTG	12	True	NA	-5	True	AATAAA	-23	NA	44876315	44508274	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_44508985_44520004_44520230_44521999_44522177_44523290_44523485_44532580_44532722_44607168_44607265_44610847_44610971_44665483_44665610_44703725_44703855_44711291_44711395_44714649_44714742_44774746_44774850_44776021_44776151_44777041_44777125_44777241_44777315_44779662_44779760_44779848_44780023_44815985_44816137_44875224_44875354_44875814
H1_mix_00019199	chr12	-	3208	21	FSM	ENSG00000184613.11	ENST00000452445.6	3196	21	40	-52	0	45	multi-exon	FALSE	canonical	3	38	junction_20	36.7843376996243	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGATTCTATAAAAATTGCA	12	True	NA	40	True	NA	NA	NA	44876315	44508229	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_44508985_44520004_44520230_44521999_44522177_44523290_44523485_44532580_44532722_44607168_44607265_44610847_44610971_44665483_44665610_44703725_44703855_44711291_44711395_44714649_44714742_44774746_44774850_44776021_44776151_44777041_44777125_44777241_44777315_44779662_44779760_44779848_44780023_44815985_44816137_44875224_44875354_44875814_44875901_44876293
H1_mix_00019201	chr12	-	1839	3	FSM	ENSG00000134297.7	ENST00000256692.6	1874	3	18	17	18	-17	multi-exon	FALSE	canonical	3	14	junction_2	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAAAAACCATGA	2	True	NA	NA	False	AATAAA	-28	NA	45216006	45173063	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_45174643_45176240_45176434_45215939
H1_mix_00019203	chr12	-	9761	1	FSM	ENSG00000273015.2	ENST00000609803.2	9730	1	-35	4	-35	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCATTGTTTCAGCTT	-3	True	NA	NA	False	AATAAA	-11	NA	45727810	45718049	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_45718000_45727800
H1_mix_00019204	chr12	-	7552	15	FSM	ENSG00000139218.18	ENST00000369367.8	7552	15	0	0	0	0	multi-exon	FALSE	canonical	2	107	junction_2	69.3641676595491	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTTAACATTTTATTAT	-7	True	NA	30	True	AATAAA	-18	NA	45990574	45919130	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_45922195_45922462_45922583_45922935_45923155_45924727_45925075_45926141_45928860_45931505_45931613_45933130_45933233_45934175_45934286_45934446_45934506_45945248_45945314_45948436_45948538_45951649_45951728_45961699_45961858_45964106_45964189_45990352
H1_mix_00019205	chr12	-	507	3	FSM	ENSG00000139218.18	ENST00000550893.2	507	3	0	0	0	0	multi-exon	FALSE	canonical	2	107	junction_1	34.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTCTACTTTTTTGCC	5119	False	NA	-9	True	AATAAA	-17	NA	45924788	45922355	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_45922583_45922935_45923155_45924727
H1_mix_00019207	chr12	-	1360	4	FSM	ENSG00000139218.18	ENST00000395453.2	1336	4	0	-24	0	24	multi-exon	FALSE	canonical	3	40	junction_1	149.760549619124	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAATTTTTTTAGAGATT	-13	True	NA	15	True	AATAAA	-44	NA	45990580	45960430	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_45961323_45961699_45961858_45964106_45964189_45990352
H1_mix_00019208	chr12	-	8106	17	FSM	ENSG00000111371.16	ENST00000398637.10	8097	17	0	-9	0	9	multi-exon	FALSE	canonical	3	303	junction_16	128.819095537114	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTTTGTTCTTTTGCA	1005	False	46269065	-2	True	ATTAAA	-28	NA	46269043	46183053	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_46189072_46197719_46197818_46197918_46198061_46198624_46198744_46201097_46201199_46203009_46203090_46204300_46204418_46204531_46204591_46206079_46206163_46207154_46207237_46207528_46207622_46209053_46209128_46229152_46229269_46229563_46229640_46239678_46239894_46243199_46243315_46268525
H1_mix_00019209	chr12	-	2332	17	FSM	ENSG00000111371.16	ENST00000546893.5	2332	17	0	0	0	0	multi-exon	FALSE	canonical	3	437	junction_16	99.98999949995	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTTTTTAGAAGAGAAAAGA	-3	True	NA	NA	False	NA	NA	NA	46269119	46188564	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_46189072_46197719_46197818_46197918_46198061_46198624_46198744_46201097_46201199_46203009_46203090_46204300_46204418_46204531_46204591_46206079_46206163_46207154_46207237_46207528_46207622_46209053_46209128_46229152_46229269_46229563_46229640_46239678_46239894_46243199_46243315_46268864
H1_mix_00019210	chr12	-	1076	12	FSM	ENSG00000111371.16	ENST00000549633.5	1076	12	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_11	231.158347930984	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCCTTCACAAATATCAGA	1005	False	46269065	NA	False	TTTAAA	-43	NA	46269043	46198727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_46198744_46201097_46201199_46203009_46203090_46204300_46204418_46204531_46204591_46206079_46206163_46207154_46207237_46207528_46207622_46209053_46209128_46229152_46229269_46229563_46229640_46268864
H1_mix_00019211	chr12	-	4795	16	FSM	ENSG00000134294.14	ENST00000256689.10	4795	16	0	0	0	0	multi-exon	FALSE	canonical	3	903	junction_13	74.507151036364	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCAGTGTTTTTTGTTTT	1	True	NA	-11	True	AATAAA	-18	NA	46372773	46358187	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_46361210_46362283_46362382_46362493_46362639_46363020_46363146_46363725_46363827_46363923_46364004_46364388_46364557_46364643_46364703_46365106_46365190_46366863_46366946_46367075_46367169_46367266_46367341_46370511_46370628_46370775_46370858_46371177_46371380_46372508
H1_mix_00019214	chr12	-	999	2	Antisense	novelGene_ENSG00000257261.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	0	139	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCCAGTCTCAAGTATTC	NA	False	NA	NA	False	AATAAA	-18	NA	46669787	46668594	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr12_-_46669125_46669318
H1_mix_00019215	chr12	-	3800	16	NIC	ENSG00000139209.16	novel	3791	16	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	3	39	junction_8	8.41321711488668	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATGTGATTTTTGATCT	6	True	NA	-4	True	AATAAA	-18	NA	46832430	46764760	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_46766803_46768309_46768408_46769283_46769429_46775048_46775174_46776903_46777005_46778288_46778369_46778500_46778777_46779610_46779670_46779779_46779863_46779948_46780031_46784541_46784635_46785103_46785178_46787915_46788032_46788527_46788619_46792952_46793184_46832326
H1_mix_00019216	chr12	-	3012	2	FSM	ENSG00000139211.7	ENST00000266581.4	3763	2	0	751	0	-11	multi-exon	FALSE	canonical	1	3	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTCCAAAATTCTTAAAG	-1	True	NA	-7	True	TATAAA	-20	NA	47079865	47076457	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_47079066_47079461
H1_mix_00019217	chr12	-	3213	3	FSM	ENSG00000139211.7	ENST00000550413.2	3224	3	0	11	0	-11	multi-exon	FALSE	canonical	1	3	junction_1	3	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTCCAAAATTCTTAAAG	-10	True	NA	-7	True	TATAAA	-20	NA	47079959	47076457	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_47079066_47079141_47079249_47079461
H1_mix_00019218	chr12	-	4918	17	FSM	ENSG00000005175.10	ENST00000005386.8	4339	17	44	-623	0	623	multi-exon	FALSE	canonical	3	311	junction_11	27.4214075814864	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTGATTCATTCATTT	9009	False	NA	NA	False	ATTAAA	-19	NA	47705986	47660625	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_47663591_47666979_47667081_47667753_47667852_47668915_47669103_47670106_47670346_47679492_47679595_47679703_47679775_47681695_47681818_47686779_47686908_47687875_47688002_47689124_47689196_47690517_47690640_47696275_47696404_47697596_47697720_47701463_47701605_47702687_47702847_47705951
H1_mix_00019220	chr12	-	736	3	FSM	ENSG00000005175.10	ENST00000551293.1	621	3	-80	-35	-49	35	multi-exon	FALSE	canonical	3	379	junction_1	19.5	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGGTGGTTACATCTTT	8916	False	NA	NA	False	NA	NA	NA	47706079	47701155	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_47701605_47702687_47702847_47705951
H1_mix_00019221	chr12	-	5968	28	FSM	ENSG00000079337.16	ENST00000449771.7	6300	28	0	332	0	-23	multi-exon	FALSE	canonical	2	5	junction_6	3.72880383663799	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATAATAATAGGTTAAGAC	-22	True	NA	NA	False	NA	NA	NA	47758880	47734694	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_47737686_47738021_47738094_47738192_47738248_47738689_47738755_47739142_47739231_47740140_47740192_47740304_47740396_47740641_47740824_47740914_47741041_47741504_47741603_47743529_47743677_47743986_47744069_47746859_47746900_47747543_47747627_47747711_47747863_47748073_47748153_47748453_47748543_47748818_47748932_47749389_47749537_47749740_47749818_47749929_47749991_47750340_47750426_47751047_47751217_47751398_47751521_47751722_47751830_47751915_47751970_47757865_47758079_47758550
H1_mix_00019222	chr12	-	4653	16	FSM	ENSG00000079337.16	ENST00000395358.7	4092	16	-300	-261	-65	261	multi-exon	FALSE	canonical	2	5	junction_3	3.96316371938716	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTGGTGTGAATGCTGT	162	False	NA	NA	False	NA	NA	NA	47758945	47744191	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_47746900_47747543_47747627_47747711_47747863_47748073_47748153_47748453_47748543_47748818_47748932_47749389_47749537_47749740_47749818_47749929_47749991_47750340_47750426_47751047_47751217_47751398_47751521_47751722_47751830_47751915_47751970_47757865_47758079_47758550
H1_mix_00019223	chr12	-	4270	21	FSM	ENSG00000061273.18	ENST00000470668.5	4266	21	0	-4	0	0	multi-exon	TRUE	canonical	3	10	junction_13	47.4616687443667	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCTCTGAAAGGGCCCCC	NA	False	NA	-9	True	AATAAA	-20	NA	47798189	47782721	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_47783887_47784078_47784218_47785386_47785472_47785751_47785886_47786584_47786704_47787711_47787810_47788044_47788165_47789260_47789349_47789522_47789579_47789812_47789921_47791258_47791309_47791585_47791707_47791870_47792670_47793368_47793589_47794759_47794934_47795183_47795381_47795586_47795768_47796206_47796299_47797016_47797143_47797383_47797500_47798107
H1_mix_00019224	chr12	-	4065	25	FSM	ENSG00000061273.18	ENST00000354334.7	4065	25	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_23	41.4685288970912	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCTCTGAAAGGGCCCCC	704	False	NA	-9	True	AATAAA	-20	NA	47819866	47782721	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_47783887_47784078_47784218_47785386_47785472_47785751_47785886_47786584_47786704_47787711_47787810_47788044_47788165_47789260_47789349_47789522_47789579_47789812_47789921_47791258_47791309_47791585_47791707_47791870_47792005_47793368_47793589_47794759_47794934_47795183_47795381_47795586_47795768_47796206_47796299_47797016_47797143_47797383_47797500_47798107_47798220_47798561_47798653_47798784_47798973_47802223_47802275_47819766
H1_mix_00019225	chr12	-	4373	25	FSM	ENSG00000061273.18	ENST00000552960.5	3216	25	-228	-929	-134	0	multi-exon	FALSE	canonical	3	55	junction_24	39.1814688341313	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCTCTGAAAGGGCCCCC	456	False	NA	-9	True	AATAAA	-20	NA	47820114	47782721	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_47783887_47784078_47784218_47785386_47785472_47785751_47785886_47786584_47786704_47787711_47787810_47788044_47788165_47789260_47789349_47789522_47789579_47789812_47789921_47791258_47791309_47791585_47791707_47791870_47792005_47793368_47793589_47794759_47794934_47795183_47795381_47795586_47795768_47795905_47796017_47796206_47796299_47797016_47797143_47797383_47797500_47798107_47798220_47798561_47798653_47798784_47798973_47819766
H1_mix_00019227	chr12	-	4095	24	NIC	ENSG00000061273.18	novel	4213	26	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_23	39.4558929162971	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCTCTGAAAGGGCCCCC	623	False	NA	-9	True	AATAAA	-20	NA	47819947	47782721	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_47783887_47784078_47784218_47785386_47785472_47785751_47785886_47786584_47786704_47787711_47787810_47788044_47788165_47789260_47789349_47789522_47789579_47789812_47789921_47791258_47791309_47791585_47791707_47791870_47792005_47793368_47793589_47794759_47794934_47795183_47795381_47795586_47795768_47796206_47796299_47797016_47797143_47797383_47797500_47798107_47798220_47798561_47798653_47798784_47798973_47819766
H1_mix_00019230	chr12	-	4990	53	FSM	ENSG00000139219.19	ENST00000337299.7	4442	53	-108	-440	-60	0	multi-exon	FALSE	canonical	3	4	junction_52	11.8329096793346	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTGACTTGTGGTTTGT	NA	False	NA	-1	True	ATTAAA	-24	NA	48004614	47972966	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_47973554_47974088_47974332_47974674_47974863_47975316_47975606_47975962_47976071_47976513_47976568_47976811_47976920_47977101_47977156_47977319_47977428_47977599_47977654_47978009_47978118_47978290_47978399_47978596_47978759_47979510_47979565_47980008_47980063_47980553_47980662_47980914_47980969_47981342_47981397_47981775_47981830_47982106_47982161_47982501_47982610_47982847_47982947_47983092_47983138_47983384_47983439_47983682_47983737_47984086_47984141_47984545_47984600_47984994_47985094_47985533_47985588_47985727_47985827_47985911_47985966_47986335_47986444_47986834_47986889_47987077_47987177_47987268_47987314_47987610_47987710_47989227_47989282_47989760_47989806_47992877_47992932_47993457_47993503_47993808_47993863_47993993_47994048_47994423_47994478_47995254_47995309_47995709_47995764_47995874_47995920_47996547_47996626_47997605_47997708_47997870_47997925_47998031_47998065_47998168_47998202_47998414_47998432_48004236
H1_mix_00019231	chr12	-	765	2	FSM	ENSG00000139219.19	ENST00000490609.2	747	2	0	-18	0	18	multi-exon	FALSE	canonical	3	53	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGAAGGACAGATGTGAT	NA	False	NA	NA	False	AAAACA	-15	NA	48004554	47999678	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48000126_48004236
H1_mix_00019233	chr12	-	4679	18	FSM	ENSG00000079387.14	ENST00000448372.5	4679	18	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_17	37.2235368483669	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGGCCCAAAGGCATG	501	False	NA	NA	False	AAAAAG	-12	NA	48105808	48042973	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48045385_48046355_48046452_48046977_48047063_48048000_48048081_48048928_48049133_48063709_48063842_48065064_48065221_48065595_48065681_48066926_48066966_48071666_48071722_48074323_48074608_48074689_48074794_48083590_48083763_48088800_48088961_48096342_48096428_48097993_48098125_48101468_48101517_48105456
H1_mix_00019234	chr12	-	4538	18	NIC	ENSG00000079387.14	novel	4967	19	NA	NA	0	-222	combination_of_known_junctions	FALSE	canonical	3	71	junction_17	32.3869340137298	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAATTTGGGCCCCCTTTC	13	True	NA	-3	True	AATATA	-21	NA	48105834	48043195	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_48045385_48046355_48046452_48046977_48047063_48048000_48048081_48048928_48049133_48063709_48063842_48065064_48065221_48065595_48065681_48066926_48066966_48071666_48071722_48074323_48074608_48074689_48074794_48083590_48083763_48088800_48088961_48096342_48096428_48097993_48098125_48101468_48101517_48105401
H1_mix_00019236	chr12	-	779	1	FSM	ENSG00000240399.1	ENST00000468202.1	779	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTATTTATTATTTATTT	NA	False	NA	NA	False	ATTAAA	-15	NA	48055591	48054812	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48054800_48055600
H1_mix_00019240	chr12	-	2534	4	FSM	ENSG00000177981.11	ENST00000317697.8	2534	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	4.18993502999218	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGCAATTTCTACTTTT	-11	True	NA	0	True	AATAAA	-16	NA	48157515	48147788	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48149999_48151200_48151306_48153367_48153530_48157458
H1_mix_00019242	chr12	-	246	1	FSM	ENSG00000257885.1	ENST00000546648.1	813	1	476	91	476	-91	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGGAGGACATCGCGTAAC	NA	False	NA	NA	False	NA	NA	NA	48169183	48168937	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48168900_48169200
H1_mix_00019243	chr12	-	7220	6	FSM	ENSG00000167528.13	ENST00000547026.6	7227	6	0	7	0	-7	multi-exon	FALSE	canonical	2	12	junction_2	3.2	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCACTTATTTGTTCTC	-15	True	NA	-10	True	AATAAA	-13	NA	48350919	48337186	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48343728_48344598_48344713_48345344_48345475_48347251_48347344_48347906_48348116_48350785
H1_mix_00019244	chr12	-	2447	10	NNC	ENSG00000139620.13	novel	2373	10	NA	NA	0	101	at_least_one_novel_splicesite	TRUE	canonical	2	151	junction_1	39.2230091202147	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAATCCCAGCACTTTGG	-3	True	NA	NA	False	NA	NA	NA	48682211	48653109	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_48654176_48654940_48655061_48660365_48660620_48667692_48667790_48669105_48669269_48671794_48671963_48679035_48679151_48679654_48679834_48681381_48681642_48682186
H1_mix_00019245	chr12	-	1954	9	NNC	ENSG00000139620.13	novel	2373	10	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	2	26	junction_6	80.0264604677728	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTGTTTGAGAATATAGT	14	True	NA	1	True	AAGAAA	-42	NA	48682225	48653399	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_48654176_48654940_48655061_48660467_48660620_48667692_48667790_48669105_48669269_48671794_48671963_48679654_48679834_48681381_48681642_48682186
H1_mix_00019246	chr12	-	2075	10	NNC	ENSG00000139620.13	novel	2373	10	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	2	51	junction_2	63.5157217827228	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGTTTTGTTTGAGAAT	3	True	NA	-4	True	AAGAAA	-37	NA	48682236	48653404	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_48654176_48654940_48655061_48660467_48660620_48667692_48667790_48669105_48669269_48671794_48671963_48679035_48679151_48679654_48679834_48681381_48681642_48682186
H1_mix_00019252	chr12	-	8301	2	FSM	ENSG00000129315.11	ENST00000551989.1	726	2	-2107	-5468	-2107	-4	multi-exon	FALSE	canonical	3	27	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTGATTGTTGTTTAT	NA	False	NA	-4	True	AATAAA	-17	NA	48698084	48688461	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48694437_48695758
H1_mix_00019253	chr12	-	6788	9	FSM	ENSG00000129315.11	ENST00000261900.8	6788	9	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_2	5.63332716962187	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATTGTTGTTTATGTGT	22	True	NA	0	True	AATAAA	-21	NA	48716707	48688457	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48694437_48695758_48695830_48695998_48696163_48698137_48698184_48699777_48699841_48701012_48701074_48705767_48705897_48714442_48714525_48716514
H1_mix_00019256	chr12	-	6092	22	FSM	ENSG00000174233.12	ENST00000357869.8	6092	22	1	-1	1	1	multi-exon	FALSE	canonical	3	41	junction_21	13.7402201872332	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTTCTCTGTAGCTGT	-37	True	NA	-2	True	AATAAA	-20	NA	48789088	48766192	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48768717_48768936_48769062_48770765_48770971_48771709_48771974_48772294_48772425_48772507_48772544_48773468_48773648_48773939_48774099_48774401_48774519_48774690_48774779_48774956_48775055_48775302_48775451_48775672_48775699_48775962_48776092_48776208_48776351_48776427_48776587_48777103_48777232_48777409_48777522_48777614_48777737_48778107_48778258_48782570_48783439_48788905
H1_mix_00019257	chr12	-	6401	21	FSM	ENSG00000174233.12	ENST00000307885.4	6464	21	63	0	63	0	multi-exon	FALSE	canonical	3	52	junction_13	12.4934983091206	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGGAGGTGGGAGGCCG	4985	False	NA	NA	False	NA	NA	NA	48784066	48766328	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48768717_48768936_48769062_48770765_48770971_48771709_48771974_48772294_48772425_48772507_48772544_48773468_48773648_48773939_48774099_48774401_48774519_48774690_48774779_48774956_48775055_48775302_48775451_48775672_48775699_48775962_48776092_48776208_48776351_48776427_48776587_48777103_48777232_48777409_48777522_48777614_48777737_48778107_48778258_48782570
H1_mix_00019261	chr12	-	1665	5	FSM	ENSG00000172602.11	ENST00000309739.6	1653	5	0	-12	0	12	multi-exon	FALSE	canonical	3	112	junction_2	7.08431365765238	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTCTGTTTTCTTTAG	-2	True	NA	1	True	TATAAA	-16	NA	48865870	48857132	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48858242_48860996_48861132_48862008_48862119_48864782_48864871_48865647
H1_mix_00019262	chr12	-	396	1	FSM	ENSG00000239617.1	ENST00000489971.1	396	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACAGCTCATGTGTATGT	NA	False	NA	NA	False	AAGAAA	-6	NA	48903813	48903417	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48903400_48903800
H1_mix_00019264	chr12	-	695	6	FSM	ENSG00000134285.11	ENST00000550765.6	691	6	0	-4	0	0	multi-exon	FALSE	canonical	3	430	junction_1	39.8768103037342	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATTCTTCATCTGATA	12	True	NA	-12	True	AATAAA	-22	NA	48925492	48921958	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48922202_48923781_48923853_48924222_48924257_48924560_48924649_48925045_48925112_48925299
H1_mix_00019265	chr12	-	2663	4	FSM	ENSG00000134285.11	ENST00000551694.5	2661	4	0	-2	0	0	multi-exon	FALSE	canonical	3	433	junction_2	23.2139804619735	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATTCTTCATCTGATA	-6	True	NA	-12	True	AATAAA	-22	NA	48925510	48921958	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48924257_48924560_48924649_48925045_48925112_48925299
H1_mix_00019267	chr12	-	4042	5	FSM	ENSG00000134287.10	ENST00000256682.9	4041	5	0	-1	0	1	multi-exon	FALSE	canonical	3	808	junction_1	25.8891869319992	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCAGTGTAATGACCTTAA	-15	True	NA	-35	True	AATAAA	-19	NA	48957487	48935721	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48939109_48939654_48939780_48939996_48940108_48940947_48941189_48957309
H1_mix_00019268	chr12	-	1089	4	FSM	ENSG00000134287.10	ENST00000447318.6	1089	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	361.499654218369	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTCCTTTGCCACCCTCT	-5	True	NA	-57	True	NA	NA	NA	48957477	48938553	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48939109_48939654_48939780_48940947_48941189_48957309
H1_mix_00019271	chr12	-	1679	12	FSM	ENSG00000181929.13	ENST00000546531.5	1679	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_9	102.861296321754	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGCAAATCTAATTAAATG	-10	True	NA	-64	True	NA	NA	NA	49018787	49002311	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49003007_49003143_49003291_49003557_49003596_49003756_49003923_49004506_49004634_49004963_49005019_49005119_49005166_49005305_49005365_49005461_49005593_49005742_49005853_49013061_49013111_49018731
H1_mix_00019274	chr12	-	6884	16	ISM	ENSG00000167548.18	ENST00000685166.1	16623	54	23154	-2804	-766	-1	3prime_fragment	FALSE	canonical	2	5	junction_3	4.538232646698	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGGCTCCGTCCCATGACC	996	False	NA	NA	False	AATAAA	-21	NA	49032170	49018975	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_49021873_49022042_49022152_49022279_49022354_49022589_49022876_49024577_49024709_49024809_49024947_49026181_49027323_49027802_49027931_49028008_49028142_49028827_49028959_49029060_49029237_49029400_49029477_49030279_49030440_49030600_49030769_49030892_49031034_49031174
H1_mix_00019275	chr12	-	513	4	ISM	ENSG00000167548.18	ENST00000685166.1	16623	54	10802	21855	-524	-557	internal_fragment	FALSE	canonical	3	7	junction_2	5.79271573232759	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTTATGTGGGAGTGAG	7887	False	NA	NA	False	NA	NA	NA	49044522	49043634	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_49043783_49043867_49043999_49044190_49044305_49044402
H1_mix_00019276	chr12	-	1081	7	FSM	ENSG00000167550.11	ENST00000420065.5	1063	7	0	-18	0	8	multi-exon	FALSE	canonical	3	6	junction_5	22.1785682335197	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGTGTGTGTGTGAGACG	31	False	NA	4	True	AATAAA	-31	NA	49069947	49064667	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49065193_49065349_49065432_49066230_49066279_49066475_49066533_49066618_49066702_49069034_49069107_49069733
H1_mix_00019278	chr12	-	1274	8	FSM	ENSG00000167550.11	ENST00000550797.1	1261	8	-13	0	-13	0	multi-exon	FALSE	canonical	2	5	junction_7	20.976176963403	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTGAGAAATCTTTTGT	NA	False	NA	-30	True	AATAGA	-36	NA	49070038	49064701	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49065193_49065349_49065432_49066230_49066279_49066475_49066533_49066618_49066702_49066967_49067036_49069034_49069175_49069733
H1_mix_00019279	chr12	-	2060	17	FSM	ENSG00000139636.16	ENST00000547382.5	2235	17	183	-8	0	2	multi-exon	TRUE	canonical	3	21	junction_5	17.7833094150105	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTCTGTGTATATTTGAA	26	True	NA	1	True	AATAAA	-38	NA	49110667	49097133	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49097740_49097943_49098106_49100387_49100455_49100555_49100647_49101249_49101264_49101471_49101550_49102119_49102197_49102292_49102377_49102467_49102541_49102886_49102952_49103090_49103160_49103686_49103814_49104447_49104552_49104745_49104886_49105923_49105958_49106960_49107046_49110483
H1_mix_00019280	chr12	-	2700	17	FSM	ENSG00000139636.16	ENST00000267102.13	2295	17	180	-585	0	582	multi-exon	FALSE	canonical	3	49	junction_5	12.677335830134	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGAAGGGGTGCTTTTTT	26	True	NA	-5	True	AATAAA	-13	NA	49110667	49096553	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49097740_49097943_49098106_49100387_49100455_49100555_49100647_49101249_49101324_49101471_49101550_49102119_49102197_49102292_49102377_49102467_49102541_49102886_49102952_49103090_49103160_49103686_49103814_49104447_49104552_49104745_49104886_49105923_49105958_49106960_49107046_49110483
H1_mix_00019284	chr12	-	1632	4	FSM	ENSG00000123416.15	ENST00000336023.9	1627	4	0	-5	0	5	multi-exon	FALSE	canonical	3	8406	junction_1	791.097128465694	2467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCCTGCGTTTTTTTCTA	-1	True	NA	-18	True	AGTAAA	-22	NA	49131395	49127776	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49128939_49129241_49129391_49129499_49129723_49131297
H1_mix_00019285	chr12	-	840	2	FSM	ENSG00000123416.15	ENST00000551324.5	840	2	0	0	0	0	multi-exon	FALSE	canonical	3	10342	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCCTGGCATTAAAATATT	-1	True	NA	NA	False	AATAGA	-16	NA	49131395	49128980	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49129723_49131297
H1_mix_00019286	chr12	-	2628	3	FSM	ENSG00000167552.15	ENST00000550811.2	2628	3	0	0	0	0	multi-exon	FALSE	canonical	3	2716	junction_1	330	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTGAAGTTTTTCATGT	1329	False	NA	7	True	AATGAA	-25	NA	49187869	49184770	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49185991_49186309_49186459_49186610
H1_mix_00019287	chr12	-	1696	4	FSM	ENSG00000167552.15	ENST00000301071.12	1672	4	0	-24	0	0	multi-exon	FALSE	canonical	3	2716	junction_1	447.904007573051	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTGAAGTTTTTCATGT	-7	True	NA	7	True	AATGAA	-25	NA	49189080	49184770	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49185991_49186309_49186459_49186610_49186834_49188976
H1_mix_00019289	chr12	-	738	1	FSM	ENSG00000257464.1	ENST00000549563.1	229	1	-123	-386	-123	386	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAAATTATTTCCATTA	NA	False	NA	NA	False	NA	NA	NA	49442775	49442037	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49442000_49442800
H1_mix_00019291	chr12	-	1938	15	FSM	ENSG00000187778.14	ENST00000343810.9	1938	15	0	0	0	0	multi-exon	FALSE	canonical	3	517	junction_5	47.6864760702655	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTTTATTTTTTTTTT	-17	True	NA	-4	True	AATAAA	-21	NA	49568142	49558298	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49558730_49558842_49558971_49559213_49559302_49559452_49559536_49559728_49559822_49559938_49559968_49560294_49560371_49563000_49563140_49563437_49563547_49564480_49564591_49564736_49564896_49565528_49565668_49566076_49566216_49566721_49566842_49568047
H1_mix_00019292	chr12	-	2532	14	FSM	ENSG00000187778.14	ENST00000551625.5	2450	14	-82	0	0	0	multi-exon	FALSE	canonical	3	55	junction_13	155.284583185672	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTTATTTTATTTTTTT	293	False	NA	-7	True	AATAAA	-18	NA	49567832	49558301	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49558730_49558842_49558971_49559213_49559302_49559452_49559536_49559728_49559822_49559938_49559968_49560294_49560371_49563000_49563140_49563437_49563547_49564480_49564591_49564736_49564896_49565528_49565668_49566076_49566842_49567646
H1_mix_00019294	chr12	-	894	6	FSM	ENSG00000187778.14	ENST00000548596.5	894	6	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_5	218.638514447935	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGGAGCTGGTTCCA	252	False	NA	NA	False	NA	NA	NA	49567873	49564480	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49564591_49564736_49564896_49565528_49565668_49566076_49566216_49566721_49566842_49567646
H1_mix_00019296	chr12	-	3601	27	NIC	ENSG00000161791.14	novel	4120	27	NA	NA	-105	-790	combination_of_known_junctions	TRUE	canonical	3	20	junction_14	9.77952213834796	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGCTCAGGAGAGGGCTG	NA	False	NA	NA	False	NA	NA	NA	49707510	49645742	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_49645904_49646638_49646754_49646885_49647010_49647275_49647369_49647702_49647805_49648192_49648354_49649028_49649159_49649258_49649340_49649469_49649539_49649690_49649926_49650675_49650879_49651167_49651293_49651381_49651451_49651932_49652213_49653225_49653328_49653724_49653875_49654191_49654303_49654909_49654985_49656403_49656498_49656822_49656900_49657081_49657191_49658441_49658595_49661965_49662050_49665831_49665909_49666126_49666208_49668470_49668555_49707054
H1_mix_00019297	chr12	-	4242	5	FSM	ENSG00000167566.17	ENST00000433948.5	4235	5	0	-7	0	7	multi-exon	FALSE	canonical	3	142	junction_3	1.6393596310755	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGGCTTGTTGTGTGGGAG	534	False	NA	-1	True	AATAAA	-28	NA	49797002	49791138	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49792589_49792677_49792987_49793351_49793434_49793733_49793897_49794764
H1_mix_00019300	chr12	-	3228	2	FSM	ENSG00000186666.6	ENST00000333924.6	3226	2	2	-4	2	4	multi-exon	FALSE	canonical	3	29	junction_1	0	1292	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGTGGTGATTTCTTAC	1	True	NA	2	True	AATAAA	-21	NA	49843104	49836038	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49839016_49842853
H1_mix_00019302	chr12	-	3137	17	FSM	ENSG00000161800.13	ENST00000312377.10	3106	17	-31	0	-7	0	multi-exon	FALSE	canonical	3	102	junction_16	39.720458755533	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGGCTGGTTTTCTTGT	NA	False	NA	NA	False	AGTAAA	-19	NA	50025525	49989161	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49990344_49990683_49990793_49991997_49992134_49992244_49992378_49992549_49992656_49994130_49994330_49994413_49994510_49997039_49997205_49999140_49999272_49999615_49999734_50001171_50001253_50002246_50002301_50004234_50004305_50005255_50005393_50006433_50006637_50016630_50016720_50025397
H1_mix_00019303	chr12	-	570	7	FSM	ENSG00000161800.13	ENST00000550149.5	570	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_5	93.034790386297	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGCTGTGTCCACTATTG	-29	True	NA	NA	False	NA	NA	NA	50025477	49999674	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49999734_50001171_50001253_50002246_50002301_50004234_50004305_50005255_50005393_50016630_50016720_50025397
H1_mix_00019304	chr12	-	2507	10	FSM	ENSG00000139624.14	ENST00000317551.12	2507	10	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_9	40.307460327149	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATGACTCATTACATGCT	-25	True	NA	NA	False	AATAAA	-13	NA	50167369	50129288	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_50130695_50134545_50134703_50135731_50135839_50135940_50136070_50137727_50137821_50138566_50138618_50142052_50142111_50143073_50143205_50143951_50144058_50167100
H1_mix_00019305	chr12	-	2872	11	FSM	ENSG00000139624.14	ENST00000422340.6	2855	11	0	-17	0	0	multi-exon	FALSE	canonical	3	32	junction_10	188.98719533344	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATGACTCATTACATGCT	9927	False	NA	NA	False	AATAAA	-13	NA	50167533	50129288	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_50130695_50134545_50134703_50135731_50135839_50135940_50136070_50137727_50137821_50138566_50138618_50142052_50142111_50143073_50143205_50143951_50144058_50144768_50144970_50167100
H1_mix_00019309	chr12	-	3574	8	FSM	ENSG00000050405.14	ENST00000552783.5	3612	8	43	-5	43	3	multi-exon	FALSE	canonical	3	14	junction_3	54.79162754454	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAATGTTTCTCTTCCATT	-2	True	NA	-9	True	AATAAA	-24	NA	50222662	50175784	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_50178070_50181903_50182038_50192451_50192565_50195829_50195888_50200776_50200885_50204551_50204701_50205983_50206069_50222020
H1_mix_00019310	chr12	-	3684	11	FSM	ENSG00000050405.14	ENST00000341247.9	3680	11	1	-5	1	5	multi-exon	FALSE	canonical	3	61	junction_9	46.1415214313529	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGTTTCTCTTCCATTAT	-13	True	NA	-7	True	AATAAA	-26	NA	50283519	50175782	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_50178070_50181903_50182038_50192451_50192562_50195829_50195888_50200776_50200885_50204551_50204701_50205983_50206069_50222020_50222486_50231664_50231711_50248632_50248775_50283419
H1_mix_00019311	chr12	-	3573	8	FSM	ENSG00000050405.14	ENST00000552823.5	3254	8	-319	0	38	0	multi-exon	FALSE	canonical	3	126	junction_3	21.6691259724098	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCAATGTTTCTCTTCC	-7	True	NA	-12	True	AATAAA	-21	NA	50222667	50175787	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_50178070_50181903_50182038_50192451_50192562_50195829_50195888_50200776_50200885_50204551_50204701_50205983_50206069_50222020
H1_mix_00019312	chr12	-	3777	17	FSM	ENSG00000110911.17	ENST00000644495.1	3762	17	0	-15	0	15	multi-exon	FALSE	canonical	1	87	junction_1	83.3906235361626	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTTATAATCGGCCCTTAA	-13	True	NA	14	True	AATAAA	-33	NA	51026384	50979768	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_50981804_50988381_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51026309
H1_mix_00019313	chr12	-	3702	17	FSM	ENSG00000110911.17	ENST00000547198.5	2486	17	-27	-1189	0	0	multi-exon	FALSE	canonical	1	87	junction_1	83.8221470958004	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTACTACATTTCAATAAAA	6	True	NA	-37	True	ATTAAA	-29	NA	51026365	50979819	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_50981804_50988381_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51026314
H1_mix_00019315	chr12	-	3589	11	ISM	ENSG00000110911.17	ENST00000545993.7	1958	15	8852	-2181	0	0	3prime_fragment	FALSE	canonical	1	95	junction_8	68.8726360755852	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTCCTGGGTATTTT	8853	False	NA	0	True	ATTAAA	-20	NA	51000418	50985991	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312
H1_mix_00019316	chr12	-	4111	16	ISM	ENSG00000110911.17	ENST00000547198.5	2486	17	-30	4983	0	0	5prime_fragment	FALSE	canonical	1	95	junction_8	71.1044927475676	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTCCTGGGTATTTT	3	True	NA	0	True	ATTAAA	-20	NA	51026368	50985991	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51026314
H1_mix_00019317	chr12	-	4132	16	FSM	ENSG00000110911.17	ENST00000262052.9	4132	16	0	0	0	0	multi-exon	FALSE	canonical	1	95	junction_8	70.514490236641	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTCCTGGGTATTTT	-13	True	NA	0	True	ATTAAA	-20	NA	51026384	50985991	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51026309
H1_mix_00019321	chr12	-	7710	4	ISM	ENSG00000110925.7	ENST00000228515.6	4517	5	3498	0	3012	0	3prime_fragment	FALSE	canonical	3	87	junction_2	11.4406682011537	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGTTACTCTTTGTCT	3496	False	NA	-1	True	ATTAAA	-17	NA	51080098	51061204	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_51064670_51067672_51067970_51073822_51074083_51076410
H1_mix_00019322	chr12	-	4517	5	FSM	ENSG00000110925.7	ENST00000228515.6	4517	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	31.751968442917	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGTTACTCTTTGTCT	-2	True	NA	-1	True	ATTAAA	-17	NA	51083596	51061204	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_51064670_51067672_51067970_51073822_51074083_51076410_51076648_51083338
H1_mix_00019323	chr12	-	3783	15	FSM	ENSG00000135457.11	ENST00000257915.10	3807	15	11	13	10	-13	multi-exon	FALSE	canonical	3	216	junction_14	24.330316186073	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTACACCAAAATGCTTCT	-19	True	NA	82	True	TTTAAA	-22	NA	51173124	51093668	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_51095279_51095988_51096041_51098775_51098919_51099654_51099780_51101934_51102026_51103669_51103764_51104154_51104204_51106524_51106614_51107235_51107347_51109120_51109274_51110876_51110984_51116314_51116421_51117670_51117748_51118620_51118773_51172300
H1_mix_00019324	chr12	-	5146	11	FSM	ENSG00000184271.18	ENST00000636728.1	5157	11	0	11	0	-11	multi-exon	FALSE	canonical	3	5	junction_10	4.03112887414927	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTTGTACTGGTCTGC	425	False	NA	-16	True	AATAAA	-9	NA	51217693	51186946	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_51190593_51191595_51191765_51192329_51192472_51195969_51196174_51196798_51196928_51197769_51198024_51198549_51198687_51199746_51199869_51204172_51204369_51206788_51206884_51217641
H1_mix_00019326	chr12	-	2474	6	FSM	ENSG00000184271.18	ENST00000636119.1	2474	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	3.00665927567458	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAACTCTAATTTTCTTTG	NA	False	NA	0	True	AATAAA	-36	NA	51198167	51189160	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_51190593_51191595_51191765_51192329_51192472_51195969_51196174_51196798_51196928_51197769
H1_mix_00019327	chr12	-	1864	4	FSM	ENSG00000170545.17	ENST00000603798.6	1875	4	0	11	0	-11	multi-exon	FALSE	canonical	3	64	junction_3	57.2033410057684	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCTTAATGTATTGCC	-24	True	NA	-9	True	ATTAAA	-14	NA	51270415	51244568	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_51246120_51246750_51246832_51269244_51269317_51270255
H1_mix_00019328	chr12	-	1045	4	FSM	ENSG00000170545.17	ENST00000380103.4	1045	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	77.3103414097292	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATTCTCATGTGCAAGA	1191	False	NA	-29	True	ATTAAA	-21	NA	51269320	51245350	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_51246120_51246750_51246832_51251464_51251584_51269244
H1_mix_00019330	chr12	-	1518	3	FSM	ENSG00000170545.17	ENST00000603864.5	1518	3	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	17.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTATTCAAATTAAAAAT	28	True	NA	-66	True	NA	NA	NA	51269949	51245387	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_51246120_51246750_51246832_51269244
H1_mix_00019331	chr12	-	1369	4	FSM	ENSG00000170545.17	ENST00000605426.5	610	4	-62	-697	-62	0	multi-exon	FALSE	canonical	3	57	junction_3	60.4041941148681	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTATTCAAATTAAAAAT	491	False	NA	-66	True	NA	NA	NA	51270020	51245387	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_51246120_51246750_51246832_51269244_51269317_51269536
H1_mix_00019334	chr12	-	837	1	FSM	ENSG00000257851.2	ENST00000547726.2	1138	1	253	48	253	-48	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGTTATGCATCTAGTG	NA	False	NA	NA	False	NA	NA	NA	51713353	51712516	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_51712500_51713400
H1_mix_00019335	chr12	-	4715	2	FSM	ENSG00000261308.4	ENST00000618634.3	4705	2	-4	-6	-4	6	multi-exon	FALSE	canonical	3	13	junction_1	0	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGATTTCTCGGGGGCAG	-20	True	NA	-5	True	ATTAAA	-20	NA	51848722	51817892	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_51822425_51848539
H1_mix_00019336	chr12	-	1756	8	FSM	ENSG00000170421.13	ENST00000692008.1	1784	8	32	-4	0	0	multi-exon	FALSE	canonical	3	3165	junction_4	354.580119612606	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTGTGTGCATCTG	2988	False	NA	-4	True	AATAAA	-25	NA	52905044	52897186	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_52897619_52898460_52898520_52898678_52898900_52899774_52900066_52900587_52900684_52901158_52901220_52901863_52902073_52904657
H1_mix_00019337	chr12	-	2126	9	FSM	ENSG00000170421.13	ENST00000552551.5	2126	9	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_8	1326.73497259249	1046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTGTGTGCATCTG	-10	True	NA	-4	True	AATAAA	-25	NA	52949842	52897186	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_52897619_52898460_52898520_52898678_52898900_52899774_52900066_52900587_52900684_52901158_52901220_52901863_52902073_52904657_52905028_52949455
H1_mix_00019339	chr12	-	1824	9	NNC	ENSG00000170421.13	novel	1755	9	NA	NA	-213	0	at_least_one_novel_splicesite	FALSE	canonical	1	96	junction_8	1313.61042907515	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACCCCCCTTGCCCATGC	2743	False	NA	-98	True	NA	NA	NA	52905289	52897280	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_52897619_52898460_52898520_52898678_52898900_52899774_52900066_52900587_52900684_52901158_52901220_52901863_52902073_52904657_52905049_52905131
H1_mix_00019342	chr12	-	2433	3	FSM	ENSG00000170421.13	ENST00000619952.2	2437	3	0	4	0	-4	multi-exon	FALSE	canonical	3	59	junction_2	3.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGCTACGTACTGCCTTT	6	True	NA	NA	False	AATAAA	-14	NA	52949874	52946617	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_52948829_52949455_52949518_52949714
H1_mix_00019343	chr12	-	507	3	FSM	ENSG00000170421.13	ENST00000551318.1	507	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	52	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGATGGTGCACGCCTGT	935	False	NA	-13	True	AATACA	-14	NA	52949920	52948650	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_52948829_52949455_52949579_52949714
H1_mix_00019346	chr12	-	2874	4	FSM	ENSG00000257337.8	ENST00000546793.1	2863	4	8	-19	-3	19	multi-exon	FALSE	canonical	3	22	junction_2	4.96655480858378	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTCCATCATTTACCT	-1	True	NA	NA	False	CATAAA	-35	NA	53054430	53043169	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_53045654_53045960_53046062_53053395_53053575_53054320
H1_mix_00019352	chr12	-	3074	10	NNC	ENSG00000172819.17	novel	2917	10	NA	NA	292	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	104.205400206029	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATGTGGCTCCCTTTAG	-6	True	NA	-4	True	AATAAA	-15	NA	53231896	53210568	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_53211864_53213084_53213244_53213495_53213701_53214058_53214236_53214445_53214607_53215292_53215435_53215645_53215795_53227361_53227688_53231168_53231236_53231503
H1_mix_00019353	chr12	-	2917	10	FSM	ENSG00000172819.17	ENST00000425354.7	2917	10	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_9	97.2028552138691	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATGTGGCTCCCTTTAG	-4	True	NA	-4	True	AATAAA	-15	NA	53232209	53210568	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_53211864_53213084_53213244_53213495_53213701_53214058_53214236_53214445_53214607_53215292_53215435_53215645_53215795_53227361_53227688_53231168_53231236_53231973
H1_mix_00019354	chr12	-	2931	10	NIC	ENSG00000172819.17	novel	2917	10	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_9	101.11721593292	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATGTGGCTCCCTTTAG	-21	True	NA	-4	True	AATAAA	-15	NA	53232226	53210568	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_53211864_53213084_53213244_53213495_53213701_53214058_53214236_53214445_53214607_53215292_53215435_53215645_53215795_53227361_53227688_53231168_53231233_53231973
H1_mix_00019355	chr12	-	2965	11	NIC	ENSG00000172819.17	novel	2917	10	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_10	107.904077772807	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATGTGGCTCCCTTTAG	NA	False	NA	-4	True	AATAAA	-15	NA	53232575	53210568	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_53211864_53213084_53213244_53213495_53213701_53214058_53214236_53214445_53214607_53215292_53215435_53215645_53215795_53227361_53227688_53231168_53231236_53231973_53232193_53232510
H1_mix_00019358	chr12	-	1815	16	FSM	ENSG00000094914.14	ENST00000209873.9	1815	16	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_15	51.3477901720761	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTTACCAGTCTGTCTT	-25	True	NA	-8	True	AATAAA	-23	NA	53321610	53307459	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_53307714_53307844_53307930_53308051_53308134_53308281_53308350_53308434_53308529_53308724_53308816_53308959_53309021_53309156_53309282_53309600_53309722_53314297_53314442_53314750_53314850_53315093_53315141_53315334_53315427_53315726_53315783_53320564_53320693_53321342
H1_mix_00019363	chr12	-	4239	14	ISM	ENSG00000139625.13	ENST00000267079.6	4319	15	10514	1564	-1192	-51	3prime_fragment	FALSE	canonical	3	18	junction_13	23.1677698998021	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCCAACAGCGTTGATGC	NA	False	NA	-119	True	NA	NA	NA	53489101	53481232	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_53481281_53481940_53482212_53482298_53482370_53482564_53483190_53483348_53483487_53483606_53483724_53483910_53484021_53484256_53484366_53485055_53485215_53485316_53485476_53486055_53486248_53486438_53486623_53486946_53487156_53487254
H1_mix_00019370	chr12	-	858	4	FSM	ENSG00000170653.19	ENST00000591397.1	860	4	0	2	0	-2	multi-exon	FALSE	canonical	3	114	junction_3	20.0055547841649	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTTTGTTTCAATATAT	-43	True	NA	-4	True	AATAAA	-19	NA	53626410	53542888	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_53543449_53552540_53552638_53600952_53601022_53626278
H1_mix_00019373	chr12	-	633	5	FSM	ENSG00000135390.21	ENST00000394349.9	632	5	0	-1	0	1	multi-exon	FALSE	canonical	3	3190	junction_4	636.61703558733	1230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTGAGTCTCCTGTGT	10	True	NA	-8	True	AATAAA	-18	NA	53676083	53665168	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_53665429_53669147_53669342_53669870_53669949_53672575_53672646_53676052
H1_mix_00019374	chr12	-	2149	4	FSM	ENSG00000135390.21	ENST00000495596.5	1976	4	-173	0	-173	0	multi-exon	FALSE	canonical	3	4555	junction_1	99.5266575122241	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTTGAGTCTCCTGT	3311	False	NA	-10	True	AATAAA	-16	NA	53674194	53665170	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_53665429_53669147_53669342_53669870_53669949_53672575
H1_mix_00019375	chr12	-	1792	5	FSM	ENSG00000135390.21	ENST00000338662.6	1792	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2013.91099604724	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAGACAAATAAATACT	1	True	NA	1	True	NA	NA	NA	53677398	53665201	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_53665429_53669147_53669342_53669870_53669949_53672575_53672646_53676175
H1_mix_00019376	chr12	-	728	5	FSM	ENSG00000135390.21	ENST00000549748.2	728	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	1899.92702162478	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCCTGGGGAACGTGGTT	11	True	NA	-36	True	NA	NA	NA	53676082	53665238	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_53665429_53669147_53669342_53669870_53670115_53672575_53672646_53676052
H1_mix_00019378	chr12	-	3888	14	FSM	ENSG00000012822.16	ENST00000548263.5	3888	14	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	12.563683928138	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCTTTGTAGTTTGAACA	56	False	NA	-54	True	AATAAA	-19	NA	53727428	53711158	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_53713207_53713700_53713901_53714132_53714242_53714597_53714694_53715199_53715326_53715792_53716048_53716259_53716416_53719738_53719830_53721466_53721616_53722024_53722184_53723592_53723784_53724644_53724748_53725086_53725267_53727403
H1_mix_00019383	chr12	-	1811	4	NNC	ENSG00000123415.16	novel	926	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	8	junction_3	90.3339483373899	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGAGAGAGTCTGGGCTT	175	False	NA	NA	False	NA	NA	NA	54188940	54181274	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_54182624_54183655_54183960_54187818_54187906_54188869
H1_mix_00019384	chr12	-	2570	3	FSM	ENSG00000123415.16	ENST00000508394.6	1697	3	20	-893	0	-16	multi-exon	FALSE	canonical	3	56	junction_2	86.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCCTTTGTCTTCAGTTC	7	True	NA	-25	True	AATAAA	-5	NA	54188974	54180381	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_54182624_54183655_54183960_54188950
H1_mix_00019386	chr12	-	926	5	FSM	ENSG00000123415.16	ENST00000514685.5	926	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	80.6113360514512	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGATGCCTACCTTATGG	175	False	NA	-16	True	AATAAA	-34	NA	54188940	54181452	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_54181648_54182503_54182624_54183655_54183960_54187818_54187906_54188720
H1_mix_00019387	chr12	-	2611	3	FSM	ENSG00000123415.16	ENST00000505128.5	2607	3	0	-4	0	0	multi-exon	FALSE	canonical	2	6	junction_1	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGATGCCTACCTTATGG	9	True	NA	-16	True	AATAAA	-34	NA	54188972	54181452	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_54183960_54188514_54188597_54188950
H1_mix_00019388	chr12	-	2683	4	FSM	ENSG00000123415.16	ENST00000337581.7	1571	4	-2	-1110	0	0	multi-exon	FALSE	canonical	3	29	junction_3	82.192186706253	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAGACTCTAAATCCTT	5	True	NA	-1	True	AATAAA	-29	NA	54188976	54180357	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_54182624_54183655_54183960_54187818_54187906_54188950
H1_mix_00019389	chr12	-	1738	4	FSM	ENSG00000123415.16	ENST00000243112.9	627	4	2	-1113	0	0	multi-exon	FALSE	canonical	3	56	junction_3	73.8120736886739	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAGACTCTAAATCCTT	7	True	NA	-1	True	AATAAA	-29	NA	54188974	54180357	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_54181648_54182503_54182624_54183655_54183960_54188950
H1_mix_00019398	chr12	-	11547	5	FSM	ENSG00000094916.16	ENST00000209875.9	11546	5	0	-1	0	1	multi-exon	FALSE	canonical	3	340	junction_4	39.0600499231632	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGAGTGGTGGTTTAAA	-8	True	NA	-21	True	AATAAA	-21	NA	54280122	54230940	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_54241906_54246114_54246216_54252040_54252228_54257513_54257693_54280007
H1_mix_00019399	chr12	-	1832	5	FSM	ENSG00000094916.16	ENST00000439541.6	1832	5	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_4	146.289097338113	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGATTTACCACCAAGAGT	-12	True	NA	NA	False	NA	NA	NA	54259592	54240624	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_54241906_54246114_54246216_54252040_54252228_54257513_54257693_54259508
H1_mix_00019400	chr12	-	902	5	FSM	ENSG00000094916.16	ENST00000550411.5	894	5	0	-8	0	0	multi-exon	FALSE	canonical	3	19	junction_4	169.322916346252	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTCTCTGTCATTTCTCT	35	True	NA	-135	True	AAGAAA	-23	NA	54259545	54241746	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_54241906_54246114_54246216_54252040_54252228_54257513_54257693_54259269
H1_mix_00019401	chr12	-	2615	2	FSM	ENSG00000094916.16	ENST00000618078.1	2627	2	0	12	0	-12	multi-exon	FALSE	canonical	3	68	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAACTTCCTTGATTA	-19	True	NA	NA	False	AATAAA	-17	NA	54280133	54271852	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_54274342_54280007
H1_mix_00019403	chr12	-	2448	7	FSM	ENSG00000161642.18	ENST00000394313.7	2440	7	0	-8	0	5	multi-exon	FALSE	canonical	3	56	junction_4	10.9036181558641	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCAGACTCTGTCTTTGCC	-18	True	NA	0	True	AATAAA	-31	NA	54384733	54369127	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_54370487_54370625_54370722_54370926_54371097_54371472_54371716_54373972_54374136_54375843_54375955_54384427
H1_mix_00019404	chr12	-	2374	8	FSM	ENSG00000161642.18	ENST00000551109.5	2369	8	0	-5	0	5	multi-exon	FALSE	canonical	3	19	junction_7	21.629533852903	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCAGACTCTGTCTTTGCC	-7	True	NA	0	True	AATAAA	-31	NA	54385767	54369127	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_54370487_54370625_54370722_54370926_54371097_54371472_54371716_54373972_54374136_54375843_54375955_54384427_54384565_54385672
H1_mix_00019405	chr12	-	2083	7	FSM	ENSG00000161642.18	ENST00000352268.10	2076	7	0	-7	0	5	multi-exon	FALSE	canonical	3	4	junction_3	29.6760284854066	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCAGACTCTGTCTTTGCC	-2	True	NA	0	True	AATAAA	-31	NA	54391281	54369127	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_54370487_54370625_54370722_54370926_54371097_54373972_54374136_54375843_54375955_54384427_54384565_54391234
H1_mix_00019406	chr12	-	2339	8	FSM	ENSG00000161642.18	ENST00000338010.9	2331	8	0	-8	0	1	multi-exon	FALSE	canonical	3	32	junction_7	17.7338601527803	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGACTCAGACTCTGTCTT	16	True	NA	-4	True	AATAAA	-27	NA	54391298	54369131	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_54370487_54370625_54370722_54370926_54371097_54371472_54371716_54373972_54374136_54375843_54375955_54384427_54384565_54391234
H1_mix_00019407	chr12	-	4250	30	FSM	ENSG00000161638.11	ENST00000293379.9	4250	30	0	0	0	0	multi-exon	TRUE	canonical	3	229	junction_15	17.9534342847248	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGATCTCATGTTACTC	-1	True	NA	-6	True	AATAAA	-35	NA	54419266	54395260	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_54396377_54397364_54397488_54398596_54398699_54399644_54399759_54399863_54399948_54400845_54400996_54401372_54401479_54401584_54401666_54401775_54401856_54402000_54402094_54402179_54402331_54402982_54403051_54403186_54403325_54403624_54403780_54403910_54403967_54404144_54404247_54404429_54404476_54404702_54404895_54405165_54405375_54405663_54405717_54405869_54405927_54407648_54407693_54407831_54407877_54408109_54408236_54408755_54408802_54408892_54408955_54409231_54409353_54409484_54409598_54411833_54411965_54418980
H1_mix_00019408	chr12	-	1240	12	FSM	ENSG00000161638.11	ENST00000435631.6	1240	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_11	74.7060354692791	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACACCCCAGACTTCTTTG	9	True	NA	NA	False	NA	NA	NA	54419220	54404770	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_54404895_54405165_54405375_54405663_54405717_54405869_54405927_54407648_54407693_54407831_54407877_54408109_54408236_54408755_54408802_54408892_54408955_54409231_54409353_54409484_54409598_54418980
H1_mix_00019409	chr12	-	773	9	FSM	ENSG00000170627.11	ENST00000305879.8	807	9	6	28	6	-24	multi-exon	FALSE	canonical	2	3	junction_6	2.521780125229	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCCAAATAAACCTTTGAT	-8	True	NA	-33	True	NA	NA	NA	54473596	54455984	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_54456154_54459088_54459126_54460376_54460472_54462108_54462173_54462641_54462726_54463170_54463298_54465066_54465168_54471232_54471278_54473545
H1_mix_00019410	chr12	-	1828	7	FSM	ENSG00000135447.17	ENST00000257905.13	1828	7	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_1	25.660713595343	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGGCCTGGTCTCCCTTC	-3	True	NA	-12	True	NA	NA	NA	54588659	54579245	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_54580393_54580943_54581051_54581975_54582132_54582731_54582796_54583210_54583249_54584259_54584321_54588404
H1_mix_00019414	chr12	-	5132	4	Genic_Genomic	ENSG00000179899.8	novel	3061	1	NA	NA	-368	2054	multi-exon	FALSE	canonical	1	57	junction_1	1193.14439845123	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTCAACATCACTGGAGAAA	NA	False	NA	NA	False	AAAAAG	-8	NA	55415155	55409672	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr12_-_55412260_55412483_55414181_55414256_55414512_55414562
H1_mix_00019415	chr12	-	5386	2	Genic_Genomic	ENSG00000179899.8	novel	3061	1	NA	NA	-367	2009	multi-exon	FALSE	canonical	3	2671	junction_1	0	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-16	NA	55415154	55409717	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr12_-_55414512_55414562
H1_mix_00019416	chr12	-	3061	1	FSM	ENSG00000179899.8	ENST00000554937.1	3061	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAGGTGGCCCTCTTGCA	139	False	NA	NA	False	GATAAA	-15	NA	55414787	55411726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_55411700_55414800
H1_mix_00019418	chr12	-	4139	25	FSM	ENSG00000135424.19	ENST00000553804.6	4138	25	0	-1	0	1	multi-exon	TRUE	canonical	2	2	junction_20	29.4843414186054	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCCTCTTTGAGTCTTG	-15	True	NA	NA	False	ATTAAA	-20	NA	55707904	55684566	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_55685289_55687970_55688097_55688201_55688301_55688843_55688958_55692843_55692976_55693140_55693318_55694020_55694124_55694255_55694331_55694442_55694523_55694614_55694696_55694777_55694971_55695521_55695638_55696282_55696433_55696898_55697069_55697215_55697278_55697450_55697547_55697694_55697823_55697937_55698027_55698382_55698577_55698709_55698918_55700261_55700394_55700898_55701155_55702871_55702952_55703050_55703179_55707476
H1_mix_00019421	chr12	-	727	6	FSM	ENSG00000135404.12	ENST00000548898.5	727	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	1413.80598386059	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCAGGCAGTGGGAGAAG	2567	False	NA	NA	False	NA	NA	NA	55727108	55725322	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_55725627_55725812_55725897_55726120_55726262_55726699_55726796_55726889_55726965_55727081
H1_mix_00019422	chr12	-	1034	8	FSM	ENSG00000135404.12	ENST00000257857.9	1023	8	0	-11	0	11	multi-exon	FALSE	canonical	3	3268	junction_7	187.528174753904	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGAGAAGTGAGGATCCAG	-1	True	NA	NA	False	NA	NA	NA	55729009	55725311	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_55725627_55725812_55725897_55726120_55726262_55726699_55726796_55726889_55726965_55727150_55727340_55728275_55728353_55728952
H1_mix_00019423	chr12	-	504	3	FSM	ENSG00000135404.12	ENST00000548117.5	499	3	0	-5	0	0	multi-exon	FALSE	canonical	3	3424	junction_2	99	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTGATTCCTTCCTTTC	3319	False	NA	-2	True	NA	NA	NA	55726356	55725442	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_55725627_55725812_55725897_55726120
H1_mix_00019425	chr12	-	981	8	FSM	ENSG00000135404.12	ENST00000420846.7	981	8	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_7	1226.82828164868	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTGATTCCTTCCTTTC	8	True	NA	-2	True	NA	NA	NA	55728650	55725442	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_55725627_55725812_55725897_55726120_55726262_55726699_55726796_55726889_55726965_55727150_55727340_55728275_55728353_55728515
H1_mix_00019426	chr12	-	949	7	FSM	ENSG00000135404.12	ENST00000552692.5	949	7	0	0	0	0	multi-exon	FALSE	canonical	3	3351	junction_3	166.505672242386	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGGTCTGAGTTTGTCT	1193	False	NA	-29	True	ATTAAA	-25	NA	55728482	55725469	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_55725627_55725812_55725897_55726120_55726262_55726699_55726796_55726889_55726965_55727150_55727340_55728275
H1_mix_00019427	chr12	-	1233	8	FSM	ENSG00000135404.12	ENST00000549117.5	1233	8	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_7	1195.93800603782	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGACCGAAAAGAGATGGT	NA	False	NA	-41	True	ATTAAA	-13	NA	55729707	55725481	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_55725627_55725812_55725897_55726120_55726262_55726699_55726796_55726889_55726965_55727150_55727340_55728275_55728353_55729281
H1_mix_00019429	chr12	-	846	7	FSM	ENSG00000135404.12	ENST00000552164.5	845	7	0	-1	0	1	multi-exon	FALSE	canonical	3	74	junction_6	1310.8570245793	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGATAACCCTGAGCAGG	698	False	NA	53	True	NA	NA	NA	55728977	55725810	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_55725897_55726120_55726262_55726699_55726796_55726889_55726965_55727150_55727340_55728275_55728353_55728795
H1_mix_00019431	chr12	-	1163	12	FSM	ENSG00000205323.9	ENST00000546604.5	1163	12	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	725.252478123855	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGGGGTAGGGAGGAACA	-8	True	NA	NA	False	NA	NA	NA	55817724	55752462	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_55752841_55757382_55757554_55760550_55760641_55789074_55789144_55790566_55790593_55794358_55794388_55794806_55794881_55796024_55796077_55800561_55800630_55800853_55800901_55803628_55803729_55817665
H1_mix_00019432	chr12	-	997	11	FSM	ENSG00000205323.9	ENST00000552884.5	997	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_9	1011.43474332257	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGATATGTTCAGAGGGG	-6	True	NA	NA	False	AATAAA	-16	NA	55817722	55752579	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_55752841_55757382_55757554_55760550_55760641_55789074_55789144_55790566_55790593_55794358_55794388_55794806_55794881_55796024_55796077_55800561_55800630_55803628_55803729_55817665
H1_mix_00019434	chr12	-	898	11	FSM	ENSG00000205323.9	ENST00000336133.8	898	11	0	0	0	0	multi-exon	FALSE	canonical	3	2262	junction_1	156.243399860602	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGTGTTTTATTAGGTGC	-8	True	NA	-11	True	AATAAA	-19	NA	55817724	55757269	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_55757554_55760550_55760641_55789074_55789144_55790566_55790593_55794358_55794388_55794806_55794881_55796024_55796077_55800561_55800630_55800853_55800901_55803628_55803729_55817665
H1_mix_00019435	chr12	-	1812	16	FSM	ENSG00000257390.5	ENST00000546837.5	1807	16	0	-5	0	5	multi-exon	FALSE	canonical	3	11	junction_10	1155.5520162339	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGTGTTTTATTAGGTGC	9681	False	NA	-11	True	AATAAA	-19	NA	55827546	55757269	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_55757554_55760550_55760641_55789074_55789144_55790566_55790593_55794358_55794388_55794806_55794881_55796024_55796077_55800561_55800630_55800853_55800901_55803628_55803729_55822000_55822188_55822372_55822476_55822571_55822733_55823069_55823190_55823401_55823509_55827251
H1_mix_00019438	chr12	-	3256	7	FSM	ENSG00000135392.19	ENST00000678005.2	3256	7	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_6	22.7961985134949	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTATCTTCCCTCTTTGT	5	True	NA	-5	True	TATAAA	-15	NA	55829587	55820984	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_55822188_55822372_55822476_55822571_55822733_55823069_55823190_55823401_55823509_55827251_55828715_55829488
H1_mix_00019439	chr12	-	3620	7	FSM	ENSG00000135392.19	ENST00000546957.2	3618	7	0	-2	0	0	multi-exon	FALSE	canonical	3	43	junction_6	76.2111467495988	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTATCTTCCCTCTTTGT	-11	True	NA	-5	True	TATAAA	-15	NA	55829603	55820984	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_55822188_55822372_55822476_55822571_55822733_55823069_55823190_55823401_55823509_55827251_55828715_55829140
H1_mix_00019442	chr12	-	1103	3	FSM	ENSG00000170473.17	ENST00000398213.4	1073	3	0	-30	0	29	multi-exon	FALSE	canonical	3	121	junction_2	337	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGATATTGTATCTCCTGA	9	True	NA	15	True	NA	NA	NA	55927112	55901383	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_55902356_55903386_55903481_55927075
H1_mix_00019443	chr12	-	1207	3	FSM	ENSG00000170473.17	ENST00000408946.7	1207	3	0	0	0	0	multi-exon	FALSE	canonical	3	709	junction_2	43	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTTGCCTCCTTATTTT	5	True	NA	-14	True	AATAAA	-17	NA	55927894	55901412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_55902356_55903386_55903481_55927724
H1_mix_00019445	chr12	-	653	2	FSM	ENSG00000170473.17	ENST00000549939.1	653	2	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTGTGTCACTGTTTTG	4873	False	NA	64	True	ATTAAA	-1	NA	55927756	55913745	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_55914367_55927724
H1_mix_00019446	chr12	-	2127	11	FSM	ENSG00000185664.15	ENST00000548747.6	2126	11	0	-1	0	1	multi-exon	FALSE	canonical	3	774	junction_8	77.6443172421524	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTTTTTCTGTTGCTTC	-2	True	NA	-3	True	AATAAA	-16	NA	55966042	55954103	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_55954350_55955273_55955362_55955463_55955670_55955778_55955864_55956102_55956220_55956948_55957672_55957922_55958085_55958472_55958608_55961316_55961464_55961621_55961733_55965935
H1_mix_00019447	chr12	-	1869	9	FSM	ENSG00000185664.15	ENST00000550464.5	1867	9	0	-2	0	1	multi-exon	FALSE	canonical	3	26	junction_8	300.622271297387	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTTTTTCTGTTGCTTC	-2	True	NA	-3	True	AATAAA	-16	NA	55966042	55954103	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_55954350_55955273_55955362_55955463_55955670_55955778_55955864_55956102_55956220_55956948_55957672_55957922_55958085_55958472_55958608_55965935
H1_mix_00019448	chr12	-	801	4	FSM	ENSG00000185664.15	ENST00000550590.5	801	4	0	0	0	0	multi-exon	FALSE	canonical	3	774	junction_1	108.369737473153	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTCCAGTGCCGTTTCGA	-2	True	NA	NA	False	NA	NA	NA	55966042	55958171	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_55958608_55961316_55961464_55961621_55961733_55965935
H1_mix_00019449	chr12	-	604	1	FSM	ENSG00000237493.3	ENST00000552016.1	604	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGCTGAGGACCCTTTC	-4	True	NA	NA	False	CATAAA	-19	NA	55981035	55980431	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_55980400_55981000
H1_mix_00019450	chr12	-	4671	29	NNC	ENSG00000139613.12	novel	5090	29	NA	NA	0	11131	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	106.642737537011	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATAGCTGGGCCTGG	1	True	NA	NA	False	AATACA	-26	NA	56189483	56151227	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_56151253_56162364_56163766_56164647_56164732_56165317_56165700_56168059_56168195_56169528_56169696_56169775_56169912_56170143_56170209_56171270_56171433_56171678_56171938_56172427_56172491_56172584_56172705_56173695_56173850_56174650_56174765_56178021_56178094_56178403_56178535_56178809_56178848_56178996_56179057_56180976_56181102_56181481_56181598_56181703_56181836_56182003_56182080_56183860_56183931_56184174_56184245_56184843_56184937_56185029_56185112_56186154_56186241_56187186_56187307_56189350
H1_mix_00019451	chr12	-	4867	31	NNC	ENSG00000139613.12	novel	4271	30	NA	NA	0	11131	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	130.603560441513	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATAGCTGGGCCTGG	759	False	NA	NA	False	AATACA	-26	NA	56189520	56151227	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_56151253_56162364_56163766_56164302_56164369_56164647_56164732_56165317_56165700_56168059_56168195_56169528_56169696_56169775_56169912_56170143_56170209_56171270_56171433_56171678_56171938_56172427_56172491_56172584_56172705_56172936_56173030_56173695_56173850_56174650_56174765_56178021_56178094_56178403_56178535_56178809_56178848_56178996_56179057_56180976_56181102_56181481_56181598_56181703_56181836_56182003_56182080_56183860_56183931_56184174_56184245_56184843_56184937_56185029_56185112_56186154_56186241_56187186_56187307_56189350
H1_mix_00019452	chr12	-	5090	29	FSM	ENSG00000139613.12	ENST00000550164.6	5090	29	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_11	100.285434472544	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGGGTGCATTCTGTG	1	True	NA	0	True	TATAAA	-21	NA	56189483	56162358	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56163766_56164302_56164732_56165317_56165700_56168059_56168195_56169528_56169696_56169775_56169912_56170143_56170209_56171270_56171433_56171678_56171938_56172427_56172491_56172584_56172705_56172936_56173030_56173695_56173850_56174650_56174765_56178021_56178094_56178403_56178535_56178809_56178848_56178996_56179057_56180976_56181102_56181481_56181598_56181703_56181836_56182003_56182080_56183860_56183931_56184174_56184245_56184843_56184937_56185029_56185112_56186154_56186241_56187186_56187307_56189350
H1_mix_00019454	chr12	-	4091	28	FSM	ENSG00000139613.12	ENST00000267064.8	4076	28	0	-15	0	0	multi-exon	FALSE	canonical	3	285	junction_1	55.6883844183155	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAGATTTTAAAAAGCCA	731	False	NA	NA	False	ATTAAA	-13	NA	56189548	56163329	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56163766_56164302_56164732_56165317_56165700_56168059_56168195_56169528_56169696_56169775_56169912_56170143_56170209_56171270_56171433_56171678_56171938_56172427_56172491_56172584_56172705_56173695_56173850_56174650_56174765_56178021_56178094_56178403_56178535_56178809_56178848_56178996_56179057_56180976_56181102_56181481_56181598_56181703_56181836_56182003_56182080_56183860_56183931_56184174_56184245_56184843_56184937_56185029_56185112_56186154_56186241_56187186_56187307_56189350
H1_mix_00019455	chr12	-	3839	29	FSM	ENSG00000139613.12	ENST00000347471.8	3839	29	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_11	110.879093923912	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAGATTTTAAAAAGCCA	731	False	NA	NA	False	ATTAAA	-13	NA	56189548	56163329	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56163766_56164647_56164732_56165317_56165700_56168059_56168195_56169528_56169696_56169775_56169912_56170143_56170209_56171270_56171433_56171678_56171938_56172427_56172491_56172584_56172705_56172936_56173030_56173695_56173850_56174650_56174765_56178021_56178094_56178403_56178535_56178809_56178848_56178996_56179057_56180976_56181102_56181481_56181598_56181703_56181836_56182003_56182080_56183860_56183931_56184174_56184245_56184843_56184937_56185029_56185112_56186154_56186241_56187186_56187307_56189350
H1_mix_00019468	chr12	-	5616	7	FSM	ENSG00000181852.18	ENST00000345093.9	5593	7	-31	8	-20	-8	multi-exon	FALSE	canonical	3	90	junction_6	30.4192921241329	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTCAGTGACTTTGATA	-10	True	NA	-11	True	AGTAAA	-17	NA	56221953	56202186	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56206799_56207645_56207750_56208162_56208299_56210296_56210569_56213957_56214071_56216428_56216614_56221759
H1_mix_00019469	chr12	-	1193	7	FSM	ENSG00000181852.18	ENST00000552656.5	1193	7	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_6	41.0991348922199	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACTCGACTGGCTATCA	10	True	NA	NA	False	NA	NA	NA	56221933	56206446	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56206799_56207645_56207750_56208162_56208299_56210296_56210569_56213957_56214071_56216428_56216614_56221902
H1_mix_00019470	chr12	-	960	4	ISM	ENSG00000181852.18	ENST00000345093.9	5593	7	57	7834	1	24	5prime_fragment	FALSE	canonical	3	90	junction_3	40.077702307171	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCGTTTGTCAGGTTGA	14	True	NA	22	True	ATTAAA	-40	NA	56221865	56210012	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_56210569_56213957_56214071_56216428_56216614_56221759
H1_mix_00019474	chr12	-	2928	11	FSM	ENSG00000062485.19	ENST00000351328.8	2915	11	0	-13	0	13	multi-exon	FALSE	canonical	3	785	junction_3	68.5922007228227	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAATAAGGCCTGGAAGAA	-3	True	NA	13	True	AATAAA	-31	NA	56300330	56271685	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56273255_56273586_56273797_56274776_56274879_56275001_56275132_56275995_56276196_56282419_56282609_56282859_56282992_56283791_56283858_56285915_56286024_56286594_56286646_56300159
H1_mix_00019478	chr12	-	1652	6	FSM	ENSG00000257727.6	ENST00000273308.9	1450	6	91	-293	0	291	multi-exon	FALSE	canonical	3	1434	junction_2	119.838891850684	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACAGAGTCTCGCTCTA	20	True	NA	NA	False	NA	NA	NA	56315897	56309550	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56310596_56310957_56311055_56311210_56311415_56314850_56314967_56315129_56315243_56315820
H1_mix_00019479	chr12	-	984	3	FSM	ENSG00000257727.6	ENST00000546937.5	984	3	0	0	0	0	multi-exon	FALSE	canonical	3	1434	junction_2	124	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTGTCTTTTCATGCC	4578	False	NA	NA	False	NA	NA	NA	56311929	56310427	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56310596_56310957_56311055_56311210
H1_mix_00019481	chr12	-	817	3	FSM	ENSG00000257727.6	ENST00000548013.5	817	3	0	0	0	0	multi-exon	FALSE	canonical	3	1718	junction_1	24.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTTATCCTCATAATTAG	-15	True	NA	-14	True	AATAAA	-29	NA	56316047	56314489	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56314967_56315129_56315243_56315820
H1_mix_00019483	chr12	-	4540	26	FSM	ENSG00000135473.16	ENST00000440411.8	4523	26	-17	0	-11	0	multi-exon	FALSE	canonical	3	67	junction_14	16.6757308685407	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGAGAACTGCTAGTGTGG	-60	True	NA	-7	True	AATAAA	-29	NA	56334017	56316935	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56317644_56318236_56318435_56319087_56319182_56319307_56319488_56319620_56319765_56319863_56320022_56322077_56322169_56322422_56322483_56322614_56322759_56323061_56323210_56323310_56323385_56323499_56323599_56323806_56323914_56324048_56324186_56324293_56324494_56324580_56324710_56325008_56325129_56325334_56325455_56326312_56326410_56326616_56326960_56327363_56327632_56327994_56328073_56328237_56328359_56328471_56328642_56332812_56333209_56333861
H1_mix_00019487	chr12	-	4405	24	FSM	ENSG00000170581.14	ENST00000314128.9	4405	24	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_12	11.9357131180777	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCATCTCTGATCCTCT	8	True	NA	-7	True	AATAAA	-20	NA	56360107	56341596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56343532_56343824_56344136_56346145_56346204_56346441_56346625_56346818_56346956_56348528_56348624_56348751_56348805_56348923_56349060_56349162_56349262_56349425_56349510_56349588_56349637_56350096_56350191_56350411_56350433_56350828_56350889_56351097_56351191_56351291_56351451_56354465_56354615_56354777_56354864_56355275_56355352_56355442_56355533_56355707_56355804_56356131_56356286_56356440_56356579_56360057
H1_mix_00019488	chr12	-	4420	24	FSM	ENSG00000170581.14	ENST00000557235.5	3073	24	-8	-1339	0	0	multi-exon	FALSE	canonical	3	25	junction_21	23.6538522422442	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCATCTCTGATCCTCT	-19	True	NA	-7	True	AATAAA	-20	NA	56360134	56341596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56343532_56343824_56344136_56346145_56346204_56346441_56346625_56346818_56346956_56348528_56348624_56348751_56348805_56348923_56349060_56349162_56349262_56349425_56349510_56349588_56349637_56350096_56350191_56350411_56350433_56350828_56350889_56351097_56351191_56351291_56351451_56354465_56354615_56354777_56354864_56355275_56355352_56355442_56355533_56355707_56355792_56356131_56356286_56356440_56356579_56360057
H1_mix_00019489	chr12	-	4737	21	FSM	ENSG00000170581.14	ENST00000651805.1	4721	21	0	-16	0	0	multi-exon	FALSE	canonical	1	1	junction_7	29.7548315404406	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCATCTCTGATCCTCT	-19	True	NA	-7	True	AATAAA	-20	NA	56360134	56341596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56343532_56343824_56344136_56346145_56346204_56346441_56346625_56346818_56346956_56348528_56348624_56348751_56348852_56349344_56349510_56349588_56349637_56350096_56350191_56350411_56350433_56350828_56350889_56351097_56351191_56351291_56351451_56354465_56354615_56354777_56355352_56355442_56355533_56355707_56355804_56356131_56356286_56356440_56356579_56360057
H1_mix_00019492	chr12	-	9552	29	FSM	ENSG00000276272.1_ENSG00000111602.12	ENST00000229201.4	4376	29	0	-5176	0	1	multi-exon	TRUE	canonical	3	116	junction_23	144.004570505698	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATACACAATGATGAAAAAT	6	True	NA	NA	False	AATAAA	-20	NA	56449403	56411942	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56417787_56417906_56418009_56418133_56418360_56420568_56420688_56420812_56420882_56420962_56421135_56421350_56421494_56421726_56421810_56421898_56422017_56422105_56422192_56422846_56422993_56423273_56423476_56423583_56423708_56423796_56423895_56424761_56424914_56425014_56425153_56428235_56428406_56428548_56428653_56428882_56429101_56430104_56430282_56430880_56430969_56431470_56431605_56432368_56432522_56433025_56433128_56433380_56433444_56433537_56433653_56433772_56433927_56434073_56434232_56449309
H1_mix_00019493	chr12	-	399	1	FSM	ENSG00000274569.1	ENST00000620583.1	399	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGCAGTGGCAGCCCAT	NA	False	NA	NA	False	NA	NA	NA	56414045	56413646	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56413600_56414000
H1_mix_00019496	chr12	-	4262	18	FSM	ENSG00000135517.9_ENSG00000135423.13	ENST00000311966.9	2387	18	32	-1907	0	1899	multi-exon	FALSE	canonical	3	39	junction_14	9.19154116923511	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGCCTGCGGGCAGAGCA	9	True	NA	NA	False	NA	NA	NA	56488129	56469044	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56471644_56471772_56471837_56472118_56472196_56472689_56472752_56473227_56473321_56473462_56473595_56474543_56474721_56474845_56474897_56475043_56475111_56475623_56475683_56475944_56475978_56477659_56477719_56477932_56478097_56478182_56478263_56479051_56479182_56479779_56479902_56480287_56480388_56487936
H1_mix_00019501	chr12	-	2773	13	FSM	ENSG00000076108.12	ENST00000549787.5	2773	13	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_8	60.1984565139893	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTTTTCTGTTTTATT	9626	False	NA	NA	False	AAAAAG	-15	NA	56603552	56598358	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56598784_56598867_56599012_56599128_56599359_56599701_56599849_56599963_56600097_56600200_56600491_56600680_56600833_56600942_56601087_56601179_56601403_56601545_56602193_56602712_56602858_56603358_56603419_56603519
H1_mix_00019502	chr12	-	833	3	FSM	ENSG00000076108.12	ENST00000551759.1	833	3	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_2	4.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTGAAGGCCGGCTCCG	9726	False	NA	NA	False	AAAACA	-6	NA	56605867	56604239	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56604292_56604584_56605328_56605829
H1_mix_00019505	chr12	-	1759	10	FSM	ENSG00000110955.9	ENST00000262030.8	1759	10	0	0	0	0	multi-exon	FALSE	canonical	3	3296	junction_7	471.832074124724	1233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGATTCTCTTGGTT	1	True	NA	-8	True	AATAAA	-18	NA	56645984	56638174	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56638424_56639105_56639308_56639979_56640193_56642457_56642581_56642672_56642832_56643402_56643588_56643836_56643959_56644780_56644956_56645170_56645354_56645836
H1_mix_00019506	chr12	-	436	2	FSM	ENSG00000110955.9	ENST00000551182.1	457	2	21	0	21	0	multi-exon	FALSE	canonical	3	4555	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAAGCTTCATTTTTCTG	6588	False	NA	-113	True	NA	NA	NA	56639397	56638279	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56638424_56639105
H1_mix_00019509	chr12	-	2079	9	FSM	ENSG00000110958.16	ENST00000614328.4	2077	9	0	-2	0	0	multi-exon	FALSE	canonical	3	19	junction_7	1302.61179342696	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGCATTTTGGCAGTTT	NA	False	NA	-7	True	AATAAA	-32	NA	56688408	56663340	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56664499_56664775_56664801_56666203_56666267_56670274_56670365_56671748_56671848_56672739_56672810_56672951_56673066_56686868_56686918_56687997
H1_mix_00019510	chr12	-	1906	8	FSM	ENSG00000110958.16	ENST00000262033.11	1898	8	0	-8	0	0	multi-exon	FALSE	canonical	3	2925	junction_2	109.355066696724	925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGCATTTTGGCAGTTT	3	True	NA	-7	True	AATAAA	-32	NA	56688284	56663340	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56664499_56664775_56664801_56666203_56666267_56670274_56670365_56671748_56671848_56672739_56672810_56672951_56673066_56687997
H1_mix_00019511	chr12	-	1017	7	FSM	ENSG00000110958.16	ENST00000448157.6	1017	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	1128.27248728113	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTTCTTCATAACATAGA	3	True	NA	4	True	AATAAA	-19	NA	56688284	56664166	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56664499_56664775_56664801_56670274_56670365_56671748_56671848_56672739_56672810_56672951_56673066_56687997
H1_mix_00019512	chr12	-	379	1	FSM	ENSG00000241217.3	ENST00000482040.3	297	1	-85	3	-85	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTTTAGAAGAAAAGAAAAC	6087	False	NA	NA	False	NA	NA	NA	56670831	56670452	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56670500_56670800
H1_mix_00019513	chr12	-	1119	7	FSM	ENSG00000196531.14	ENST00000678416.1	1107	7	0	-12	0	0	multi-exon	FALSE	canonical	2	75	junction_6	3730.3171633105	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCCCACTTAGAATCTC	1	True	NA	NA	False	NA	NA	NA	56725269	56712304	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714688_56724961
H1_mix_00019514	chr12	-	944	8	FSM	ENSG00000196531.14	ENST00000679092.1	932	8	0	-12	0	0	multi-exon	FALSE	canonical	3	438	junction_6	3354.21172344774	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCCCACTTAGAATCTC	6	True	NA	NA	False	NA	NA	NA	56725335	56712304	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714676_56724451_56724524_56725262
H1_mix_00019515	chr12	-	2691	8	FSM	ENSG00000196531.14	ENST00000356769.7	2690	8	0	-1	0	1	multi-exon	FALSE	canonical	3	7247	junction_7	1058.03732429052	2017	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGTCGGTGACTGGTCT	NA	False	NA	-8	True	AATAAA	-23	NA	56727197	56712431	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714688_56724451_56724524_56725262
H1_mix_00019516	chr12	-	1059	8	FSM	ENSG00000196531.14	ENST00000393891.8	1059	8	0	0	0	0	multi-exon	FALSE	canonical	3	1018	junction_7	3175.14970240035	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTCAGTCGGTGACTGG	3	True	NA	-11	True	AATAAA	-20	NA	56725267	56712434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714688_56724451_56724524_56724961
H1_mix_00019517	chr12	-	964	8	FSM	ENSG00000196531.14	ENST00000546392.6	964	8	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_7	3428.40066836669	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAACTGCAGCTTGGTTT	17	False	NA	-21	True	NA	NA	NA	56725516	56712503	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714688_56724451_56724550_56725262
H1_mix_00019518	chr12	-	1875	14	FSM	ENSG00000198056.15	ENST00000672280.1	1875	14	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_5	101.870668674033	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCCATCTCAAAAAAGAAACA	-2	True	NA	NA	False	NA	NA	NA	56752374	56731295	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56731735_56734146_56734246_56738433_56738526_56739293_56739364_56740011_56740129_56741434_56741577_56741745_56741838_56742986_56743097_56744064_56744124_56746044_56746182_56746780_56746855_56746925_56747033_56751037_56751196_56752195
H1_mix_00019519	chr12	-	1423	13	FSM	ENSG00000198056.15	ENST00000338193.11	1423	13	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_6	30.0499584026334	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGTTGAAAAGATTTCC	15	True	NA	-14	True	AGTAAA	-18	NA	56752323	56731579	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56731735_56734146_56734246_56738433_56738526_56739293_56739364_56741434_56741577_56741745_56741838_56742986_56743097_56744064_56744124_56746044_56746182_56746780_56746855_56746925_56747033_56751037_56751196_56752195
H1_mix_00019520	chr12	-	1698	4	FSM	ENSG00000139547.8	ENST00000398138.5	1698	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.44948974278318	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGGACTTCCTTTGACTC	-8	True	NA	-2	True	AATAAA	-24	NA	56957608	56951430	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56952247_56952826_56952991_56954905_56955165_56957149
H1_mix_00019521	chr12	-	6274	2	FSM	ENSG00000166860.3	ENST00000300101.3	6268	2	0	-6	0	6	multi-exon	FALSE	canonical	3	113	junction_1	0	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTTCCTACCTACTATG	-28	True	NA	-9	True	AATAAA	-22	NA	57006546	56998829	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57004962_57006404
H1_mix_00019522	chr12	-	807	7	FSM	ENSG00000166863.13	ENST00000458521.7	804	7	0	-3	0	3	multi-exon	FALSE	canonical	3	97	junction_3	7.47031161033832	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGTGTGTGTTTACTT	-1	True	NA	1	True	AATAAA	-21	NA	57016529	57009996	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57010289_57012377_57012453_57012821_57012876_57013358_57013389_57013577_57013672_57015683_57015803_57016386
H1_mix_00019525	chr12	-	5413	7	NIC	ENSG00000166881.10	novel	1381	8	NA	NA	0	12	combination_of_known_splicesites	FALSE	canonical	3	9	junction_4	101.35868652135	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTAATGAACATAATATTT	-7	True	NA	9	True	AATAAA	-26	NA	57078763	57055630	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_57060060_57060771_57060946_57063118_57063345_57064645_57064740_57070673_57070894_57072787_57072913_57078618
H1_mix_00019536	chr12	-	4106	24	FSM	ENSG00000179912.21	ENST00000634871.1	4092	24	0	-14	0	0	multi-exon	TRUE	canonical	1	3	junction_21	33.364459317628	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCACTGTTTCTCTGTT	-2	True	NA	-6	True	TATAAA	-23	NA	57430808	57253761	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57255114_57255989_57256075_57256413_57256512_57257989_57258138_57258889_57259060_57266730_57266832_57268302_57268458_57268921_57269083_57269322_57269450_57269751_57269995_57280357_57280531_57283823_57284057_57289008_57289041_57295398_57295508_57296410_57296552_57297327_57297388_57298089_57298169_57299351_57299479_57300094_57300182_57303175_57303218_57305639_57305664_57310263_57310464_57395748_57395819_57430719
H1_mix_00019537	chr12	-	3905	21	NIC	ENSG00000179912.21	novel	4331	24	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_13	23.5108485597607	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCAGTCACTGTTTCTCTG	NA	False	NA	-8	True	TATAAA	-21	NA	57310447	57253763	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_57255114_57255989_57256075_57256413_57256512_57257989_57258138_57258889_57259060_57266730_57266832_57268302_57268458_57268921_57269083_57269322_57269450_57269751_57269995_57280357_57280531_57283823_57284057_57289008_57289041_57295398_57295508_57296410_57296552_57297327_57297388_57298089_57298169_57299351_57299479_57300094_57300182_57303175_57303218_57310263
H1_mix_00019545	chr12	-	97	1	FSM	ENSG00000208028.1	ENST00000385293.1	97	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCACTCAGGCTGCTGTA	1253	False	NA	NA	False	TTTAAA	-2	NA	57519259	57519162	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57519200_57519300
H1_mix_00019546	chr12	-	3655	12	FSM	ENSG00000175203.17	ENST00000679307.1	3655	12	0	0	0	0	multi-exon	FALSE	canonical	3	579	junction_8	37.5034984594	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTAAACTGAGCCTGTT	9887	False	NA	NA	False	NA	NA	NA	57537343	57529632	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57530776_57532014_57532107_57532212_57532316_57532571_57532644_57532732_57532811_57532983_57533023_57533237_57533304_57533952_57534098_57534291_57534453_57535055_57535155_57535483_57535546_57535748
H1_mix_00019547	chr12	-	2351	14	FSM	ENSG00000175203.17	ENST00000548249.6	1973	14	40	-418	0	0	multi-exon	FALSE	canonical	3	579	junction_8	35.6508379778191	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTAAACTGAGCCTGTT	25	True	NA	NA	False	NA	NA	NA	57547152	57529632	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57530776_57532014_57532107_57532212_57532316_57532571_57532644_57532732_57532811_57532983_57533023_57533237_57533304_57533952_57534098_57534291_57534453_57535055_57535155_57535483_57535546_57535748_57535846_57546027_57546097_57547027
H1_mix_00019548	chr12	-	1900	13	FSM	ENSG00000175203.17	ENST00000678322.1	1677	13	8	-231	6	0	multi-exon	FALSE	canonical	2	7	junction_12	174.047806331734	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGCAAGTACAAAACAGAAT	14	False	57547230	72	True	NA	NA	NA	57547216	57530078	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57530776_57532014_57532107_57532212_57532316_57532571_57532644_57532732_57532811_57532983_57533023_57533237_57533304_57533952_57534098_57534291_57534453_57535055_57535155_57535483_57535546_57535748_57535846_57547027
H1_mix_00019557	chr12	-	1383	6	FSM	ENSG00000037897.17	ENST00000324871.12	1378	6	0	-5	0	5	multi-exon	FALSE	canonical	3	219	junction_4	19.1164850325576	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTGGAGAGTCCTTGGG	2	True	NA	7	True	NA	NA	NA	57772105	57768465	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57769152_57769302_57769405_57769564_57769679_57769771_57769957_57771093_57771258_57771973
H1_mix_00019558	chr12	-	1385	7	NIC	ENSG00000037897.17	novel	1378	6	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_6	101.683605146334	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTATTCTGCCATTTCTC	10	True	NA	-22	True	NA	NA	NA	57772097	57768581	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_57769152_57769302_57769405_57769564_57769679_57769771_57769957_57771093_57771258_57771479_57771606_57771973
H1_mix_00019559	chr12	-	1239	5	FSM	ENSG00000037897.17	ENST00000257848.7	1096	5	5	-148	0	37	multi-exon	FALSE	canonical	3	17	junction_3	104.965172795552	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGACCCTCTCCTTTTTC	-7	True	NA	39	True	NA	NA	NA	57772114	57768433	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57769152_57769302_57769405_57769564_57769679_57771093_57771258_57771973
H1_mix_00019560	chr12	-	503	4	FSM	ENSG00000037897.17	ENST00000551117.1	503	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	118.746228010268	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAGTAGGGGACCTAGAG	31	False	NA	NA	False	NA	NA	NA	57772076	57769303	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57769405_57769564_57769679_57769771_57769957_57771973
H1_mix_00019563	chr12	-	467	1	FSM	ENSG00000206749.1	ENST00000384022.1	107	1	-425	65	-425	-65	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAAGATTAGCATGGTCC	NA	False	NA	NA	False	ACTAAA	-14	NA	57806685	57806218	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57806200_57806700
H1_mix_00019564	chr12	-	4403	3	FSM	ENSG00000207789.1_ENSG00000175215.11	ENST00000547169.5	1340	3	-99	-2964	50	0	multi-exon	FALSE	canonical	3	309	junction_2	21.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCTGCCACCAACCTT	1659	False	NA	-10	True	AATAAA	-28	NA	57824642	57819926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57823728_57823903_57824090_57824226
H1_mix_00019566	chr12	-	771	3	FSM	ENSG00000257698.3	ENST00000659090.1	2214	3	165	1278	0	60	multi-exon	FALSE	canonical	3	98	junction_1	0.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTACAGTCTCACTAAG	-34	True	NA	NA	False	TTTAAA	-27	NA	57936180	57931392	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57931738_57935469_57935554_57935838
H1_mix_00019567	chr12	-	4052	19	FSM	ENSG00000139263.12	ENST00000320743.8	4046	19	0	-6	0	0	multi-exon	FALSE	canonical	3	269	junction_13	35.6705172722395	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCCATTTATACAATAACA	-10	True	NA	-16	True	AATAAA	-21	NA	58920504	58872148	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_58872817_58874054_58874331_58874429_58874574_58876444_58876604_58877399_58877853_58878823_58879106_58880580_58880902_58882868_58883033_58883519_58883592_58885830_58885903_58886809_58886891_58887788_58887933_58888328_58888473_58888818_58888963_58889995_58890140_58890664_58890797_58913981_58914057_58914264_58914337_58919999
H1_mix_00019571	chr12	-	362	1	FSM	ENSG00000258316.1	ENST00000547105.1	1126	1	137	627	137	-627	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCTTACCCTGGCCTCT	NA	False	NA	NA	False	NA	NA	NA	62235378	62235016	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_62235000_62235400
H1_mix_00019573	chr12	-	6473	10	FSM	ENSG00000111110.12	ENST00000228705.7	6454	10	0	-19	0	19	multi-exon	FALSE	canonical	3	163	junction_8	13.0042728020874	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTTTTCTATGAATTCA	-11	True	NA	9	True	AATAAA	-45	NA	62935150	62643974	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_62648637_62667177_62667330_62689698_62689807_62693935_62694000_62720170_62720290_62737501_62737587_62788225_62788339_62801815_62802161_62832113_62832280_62934491
H1_mix_00019574	chr12	-	850	2	FSM	ENSG00000177990.12	ENST00000541911.1	850	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTTACCTCTGTGAGGA	NA	False	NA	NA	False	NA	NA	NA	63569469	63560058	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_63560663_63569223
H1_mix_00019576	chr12	-	551	3	ISM	ENSG00000177990.12	ENST00000324472.9	3976	22	-22	104866	20	-2418	5prime_fragment	FALSE	canonical	3	10	junction_1	1	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACTTTTCGCACTGAAAT	290	False	NA	NA	False	NA	NA	NA	63668515	63663778	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_63663846_63665834_63665860_63668056
H1_mix_00019578	chr12	-	2705	4	FSM	ENSG00000174206.13	ENST00000311915.12	2698	4	0	-7	0	7	multi-exon	FALSE	canonical	3	6	junction_1	16.9771087709958	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAAGTGTTTTTTGTGTTA	5	True	NA	NA	False	ATTAAA	-22	NA	64222265	64186308	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_64187653_64193846_64194659_64215677_64215964_64222002
H1_mix_00019583	chr12	-	5088	14	FSM	ENSG00000135677.11	ENST00000258145.8	5081	14	0	-7	0	3	multi-exon	FALSE	canonical	3	149	junction_5	13.204804576567	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCCTTTGTTTTAGTTC	16	True	NA	1	True	ATTAAA	-24	NA	64759406	64713441	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_64716820_64720021_64720183_64721594_64721706_64723005_64723114_64728955_64729058_64737003_64737108_64739380_64739500_64740605_64740689_64743140_64743309_64744808_64744908_64745658_64745725_64747711_64747919_64752697_64752758_64759084
H1_mix_00019584	chr12	-	2311	10	FSM	ENSG00000156076.10	ENST00000286574.9	1977	10	-272	-62	-272	62	multi-exon	FALSE	canonical	3	22	junction_6	6.05530070819498	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTAGTTAATATTTCCAG	-9	True	NA	0	True	AATAAA	-16	NA	65121577	65050563	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_65051471_65055117_65055214_65056030_65056127_65062480_65062577_65066640_65066737_65067694_65067791_65068763_65068905_65077745_65077855_65120416_65120557_65121043
H1_mix_00019585	chr12	-	7728	3	FSM	ENSG00000139233.7	ENST00000266604.7	7728	3	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_2	60	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGATCTGCATACCTT	-1	True	NA	-13	True	AATAAA	-17	NA	66130750	66116554	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_66124019_66128895_66129114_66130704
H1_mix_00019586	chr12	-	4000	7	FSM	ENSG00000155957.19	ENST00000358230.8	2876	7	7	-1131	0	1131	multi-exon	FALSE	canonical	3	266	junction_4	20.0637871688163	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCCTCACTTCTCAGACG	-13	True	NA	NA	False	NA	NA	NA	66169989	66134714	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_66138167_66138723_66138770_66145840_66145959_66147907_66147942_66152270_66152377_66153339_66153449_66169854
H1_mix_00019587	chr12	-	770	7	FSM	ENSG00000155957.19	ENST00000542724.5	770	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	110.584432297981	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAATGAGAAAAAAGGATT	-23	True	NA	-103	True	ATTAAA	-36	NA	66169999	66137919	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_66138167_66138723_66138735_66145840_66145959_66147907_66147942_66152270_66152377_66153339_66153449_66169854
H1_mix_00019588	chr12	-	571	7	FSM	ENSG00000155957.19	ENST00000534930.1	571	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	137.887635413767	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGTCAGGATTCTTGAA	7	True	NA	NA	False	ACTAAA	-41	NA	66169969	66138744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_66138770_66145840_66145959_66147907_66147942_66152270_66152377_66153339_66153449_66169289_66169354_66169854
H1_mix_00019590	chr12	-	1284	1	FSM	ENSG00000225422.4	ENST00000417216.3	1156	1	-13	-115	-13	115	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTCTTGAAAACGTTATT	NA	False	NA	NA	False	NA	NA	NA	66235247	66233963	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_66234000_66235200
H1_mix_00019593	chr12	-	2920	14	FSM	ENSG00000111554.15	ENST00000303145.11	2918	14	0	-2	0	0	multi-exon	FALSE	canonical	3	47	junction_11	10.4411566159736	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCTTCTCCAGAAAGTT	-28	True	NA	0	True	AATAAA	-16	NA	68332332	68294565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_68295367_68296922_68296983_68302619_68302873_68313442_68313553_68313643_68313754_68314947_68315266_68316077_68316254_68321346_68321447_68321524_68321629_68323072_68323241_68325440_68325576_68326656_68327022_68331106_68331222_68332227
H1_mix_00019597	chr12	-	2170	3	FSM	ENSG00000111554.15	ENST00000430606.3	2170	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	5.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATTTTATTCTAAAATGT	NA	False	NA	-17	True	ATTAAA	-12	NA	68332381	68325120	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_68327022_68331106_68331222_68332227
H1_mix_00019599	chr12	-	1026	1	FSM	ENSG00000240087.3	ENST00000435879.2	888	1	-64	-74	-64	74	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAATAATTTGACTTC	NA	False	NA	NA	False	NA	NA	NA	68553946	68552920	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_68552900_68553900
H1_mix_00019600	chr12	-	475	1	FSM	ENSG00000234925.2	ENST00000414313.2	475	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAAATTGAGTCCAGGAG	37	False	NA	NA	False	AAAAAG	-35	NA	68642993	68642518	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_68642500_68643000
H1_mix_00019602	chr12	-	492	3	FSM	ENSG00000135678.12	ENST00000546912.1	563	3	0	71	0	-71	multi-exon	FALSE	canonical	2	3	junction_1	2	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTAAAATTTTCTTATT	NA	False	NA	NA	False	TATAAA	-15	NA	68870382	68866895	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_68867049_68869324_68869496_68870214
H1_mix_00019603	chr12	-	5163	2	FSM	ENSG00000257815.8	ENST00000656495.2	5241	2	7	71	0	-71	multi-exon	FALSE	canonical	3	50	junction_1	0	901	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTCCTTAGAGTTATTTG	-23	True	NA	NA	False	AAGAAA	-7	NA	70243379	70238044	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_70242894_70243065
H1_mix_00019608	chr12	-	7597	34	FSM	ENSG00000133858.17	ENST00000552994.5	7597	34	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_26	15.178279391593	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAACAGTTAATATTTGA	-11	True	NA	-19	True	AATAAA	-13	NA	71663819	71609697	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_71610566_71610694_71610758_71611057_71611888_71613334_71613436_71614534_71614701_71614833_71614939_71615205_71615317_71619314_71619410_71619925_71620125_71620209_71620316_71623359_71623598_71624103_71624293_71626259_71626447_71627750_71627935_71628917_71629038_71629608_71629711_71630599_71630722_71630822_71630955_71631777_71631888_71631971_71632515_71632885_71633018_71633263_71633439_71634154_71634305_71634703_71634826_71635442_71635581_71636489_71636655_71636849_71637060_71638417_71638516_71642435_71642560_71644094_71644319_71644876_71645076_71647748_71647814_71656884_71657302_71663012
H1_mix_00019610	chr12	-	1282	1	FSM	ENSG00000257802.1	ENST00000550293.1	1201	1	-101	20	-101	-20	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCAGGAGTATCCTAACAA	NA	False	NA	NA	False	NA	NA	NA	71850529	71849247	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_71849200_71850500
H1_mix_00019612	chr12	-	673	4	FSM	ENSG00000111615.14	ENST00000551070.5	673	4	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_3	37.5085175512028	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAGAAAAAAAAGTA	7335	False	NA	NA	False	AAGAAA	-30	NA	75504282	75499829	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_75499952_75501722_75501817_75501922_75502001_75503903
H1_mix_00019613	chr12	-	855	4	FSM	ENSG00000111615.14	ENST00000550023.5	855	4	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_1	12.675435561221	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAATCATCATATCTGGAC	4	True	NA	NA	False	AGTAAA	-25	NA	75511613	75506163	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_75506610_75506781_75506917_75508273_75508447_75511512
H1_mix_00019616	chr12	-	1981	14	FSM	ENSG00000187109.15	ENST00000552056.5	1981	14	0	0	0	0	multi-exon	FALSE	canonical	3	453	junction_1	527.194147007583	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTAGTCATGAGACTTAA	3304	False	NA	NA	False	NA	NA	NA	76068993	76046903	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_76047719_76048420_76048465_76049199_76049251_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908
H1_mix_00019617	chr12	-	1896	16	FSM	ENSG00000187109.15	ENST00000393263.7	1896	16	0	0	0	0	multi-exon	FALSE	canonical	3	852	junction_1	416.527848875545	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGGGCCTATTTGTAAT	952	False	NA	51	True	NA	NA	NA	76084666	76047154	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_76047719_76048392_76048465_76049199_76049251_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76074202_76074240_76084566
H1_mix_00019618	chr12	-	1427	16	NIC	ENSG00000187109.15	novel	1896	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	453	junction_1	494.397393017219	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGTTCTTACAAGATAA	952	False	NA	-18	True	AATAAA	-15	NA	76084666	76047595	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_76047719_76048420_76048465_76049199_76049251_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76074202_76074240_76084566
H1_mix_00019620	chr12	-	1967	13	FSM	ENSG00000187109.15	ENST00000547773.5	1967	13	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_11	629.88045603026	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTTTGCAGCTAAAATA	889	False	NA	3	True	NA	NA	NA	76084729	76047631	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_76048465_76049199_76049251_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76074202_76074240_76084566
H1_mix_00019622	chr12	-	1686	14	FSM	ENSG00000187109.15	ENST00000535020.6	1686	14	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	605.462168818022	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTTCGTGCTTTTTATA	-1	True	NA	NA	False	AAAACA	-13	NA	76084612	76048994	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_76049526_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76074202_76074240_76084566
H1_mix_00019623	chr12	-	1838	13	FSM	ENSG00000187109.15	ENST00000549596.5	1838	13	0	0	0	0	multi-exon	FALSE	canonical	3	1581	junction_7	312.071840019783	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTTTTTGAATATCAAG	-5	True	NA	NA	False	ATTAAA	-24	NA	76084685	76049145	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76074202_76074240_76084566
H1_mix_00019624	chr12	-	892	9	FSM	ENSG00000187109.15	ENST00000547529.6	892	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	740.966419195229	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTTTTATTTCAAATAA	4903	False	NA	-5	True	AATAAA	-21	NA	76067394	76049561	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_76049786_76050530_76050654_76053090_76053111_76053832_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370
H1_mix_00019630	chr12	-	7241	24	FSM	ENSG00000091039.17	ENST00000611266.4	7239	24	1	-3	0	0	multi-exon	FALSE	canonical	3	69	junction_21	52.7361374110383	167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGTGATCAAGTGACTTTTA	-2	True	NA	-5	True	AATAAA	-19	NA	76559808	76351796	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_76356022_76356625_76356729_76358705_76358812_76369213_76369302_76369636_76369823_76371447_76371585_76373343_76373434_76375272_76375371_76378451_76378551_76384253_76384351_76386167_76386267_76386578_76386661_76389644_76389830_76390419_76390658_76392580_76392753_76394644_76394730_76397693_76397898_76399872_76399975_76402688_76402767_76410563_76410635_76450850_76450989_76459858_76459896_76487509_76487619_76559396
H1_mix_00019633	chr12	-	930	7	NNC	ENSG00000175183.10	novel	908	6	NA	NA	0	496	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	681.367599431875	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGCTAGGCAACAGGCAT	-3	True	NA	NA	False	NA	NA	NA	76879019	76858212	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_76858241_76858714_76859029_76859546_76859641_76860283_76860414_76863175_76863345_76866148_76866262_76878937
H1_mix_00019634	chr12	-	908	6	FSM	ENSG00000175183.10	ENST00000311083.10	908	6	0	0	0	0	multi-exon	FALSE	canonical	3	1701	junction_5	64.7907400791193	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCATTGTCTTTTAATTA	-3	True	NA	-19	True	AATAAA	-19	NA	76879019	76858708	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_76859029_76859546_76859641_76860283_76860414_76863175_76863345_76866148_76866262_76878937
H1_mix_00019635	chr12	-	5078	3	FSM	ENSG00000175183.10	ENST00000548783.1	5078	3	0	0	0	0	multi-exon	FALSE	canonical	3	1813	junction_1	27	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGGTGTTCATTGTCTT	1378	False	NA	-26	True	AATAAA	-12	NA	76864954	76858715	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_76859029_76859546_76859641_76860283
H1_mix_00019636	chr12	-	910	7	FSM	ENSG00000175183.10	ENST00000552330.5	910	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	847.874335552674	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATAGGCTGGCTAACTC	573	False	NA	NA	False	NA	NA	NA	76878991	76858828	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_76859029_76859546_76859641_76860283_76860414_76862809_76862960_76863175_76863345_76866148_76866262_76878937
H1_mix_00019637	chr12	-	767	6	FSM	ENSG00000175183.10	ENST00000546966.5	754	6	0	-13	0	0	multi-exon	FALSE	canonical	3	162	junction_5	676.224400624526	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATAGGCTGGCTAACTC	-7	True	NA	NA	False	NA	NA	NA	76879023	76858828	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_76859029_76859546_76859641_76860283_76860414_76863175_76863345_76866148_76866262_76878962
H1_mix_00019639	chr12	-	426	1	FSM	ENSG00000257199.2	ENST00000552481.2	591	1	178	-13	178	13	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCCTTTTCCTCTCTTTC	NA	False	NA	NA	False	AATAAA	-13	NA	76984491	76984065	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_76984100_76984500
H1_mix_00019640	chr12	-	5730	13	FSM	ENSG00000165891.16	ENST00000322886.12	5725	13	0	-5	0	2	multi-exon	FALSE	canonical	3	66	junction_2	12.9325171563776	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGGTTGTATTTTTTG	-14	True	NA	0	True	AATAAA	-21	NA	77065569	77021245	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_77024186_77025557_77025983_77027882_77028139_77029830_77030333_77033049_77033123_77033856_77034043_77043064_77043200_77044636_77044796_77046037_77046329_77050575_77050745_77055854_77056131_77064542_77064636_77065344
H1_mix_00019644	chr12	-	487	4	FSM	ENSG00000177425.11	ENST00000550603.1	482	4	0	-5	0	5	multi-exon	FALSE	canonical	2	4	junction_1	372.80826171103	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTGTATGTGTTTTG	NA	False	NA	-2	True	AATAAA	-24	NA	79596534	79584873	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_79585149_79592610_79592694_79594328_79594434_79596510
H1_mix_00019645	chr12	-	9090	6	ISM	ENSG00000177425.11	ENST00000328827.9	8991	7	383	-2	0	2	3prime_fragment	FALSE	canonical	3	781	junction_2	69.881614177121	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTGTTTTGTATGTGTT	-5	True	NA	-5	True	AATAAA	-21	NA	79690581	79584876	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_79592694_79594328_79594434_79596510_79596659_79613574_79613610_79621075_79621208_79689728
H1_mix_00019646	chr12	-	8996	7	FSM	ENSG00000177425.11	ENST00000328827.9	8991	7	0	-5	0	5	multi-exon	FALSE	canonical	3	207	junction_6	254.249658581656	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTGTATGTGTTTTG	6	True	NA	-2	True	AATAAA	-24	NA	79690964	79584873	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_79592694_79594328_79594434_79596510_79596659_79613574_79613610_79621075_79621208_79689728_79690392_79690871
H1_mix_00019647	chr12	-	863	3	FSM	ENSG00000177425.11	ENST00000547699.1	863	3	0	0	0	0	multi-exon	FALSE	canonical	3	781	junction_2	13.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAATAACTAAGCAAGTA	NA	False	NA	-51	True	AATACA	-1	NA	79597089	79592514	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_79592694_79594328_79594434_79596510
H1_mix_00019648	chr12	-	1573	4	FSM	ENSG00000177425.11	ENST00000551712.1	1573	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	416.956432576195	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCATAATGATGCCGTTTA	1409	False	NA	NA	False	NA	NA	NA	79690080	79603667	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_79604722_79613574_79613610_79621075_79621208_79689728
H1_mix_00019649	chr12	-	5643	26	NNC	ENSG00000058272.19	novel	5620	25	NA	NA	0	79243	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	117.022076549684	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTAGCCGGGCGTGGTGGC	-6	True	NA	NA	False	ACTAAA	-31	NA	79935097	79694319	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_79694346_79773570_79776016_79778549_79778601_79781814_79781863_79786373_79786479_79788647_79788784_79790466_79790484_79793862_79793929_79795637_79795760_79796781_79796951_79797194_79797396_79798493_79798585_79805591_79805769_79806165_79806334_79807225_79807331_79808482_79808578_79809794_79810011_79817393_79817519_79820773_79820932_79821077_79821167_79822115_79822191_79828319_79828465_79832331_79832492_79845301_79845421_79872807_79872939_79934694
H1_mix_00019650	chr12	-	6028	25	FSM	ENSG00000058272.19	ENST00000450142.7	5620	25	0	-408	0	403	multi-exon	FALSE	canonical	3	252	junction_13	73.8498852778767	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATCGCCTGTAGTCCCA	-6	True	NA	NA	False	AATAAA	-21	NA	79935097	79773159	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_79776016_79778549_79778601_79781814_79781863_79786373_79786479_79788647_79788784_79790466_79790484_79793862_79793929_79795637_79795760_79796781_79796951_79797194_79797396_79798493_79798585_79805591_79805769_79806165_79806334_79807225_79807331_79808482_79808578_79809794_79810011_79817393_79817519_79820773_79820932_79821077_79821167_79822115_79822191_79828319_79828465_79832331_79832492_79845301_79845421_79872807_79872939_79934694
H1_mix_00019651	chr12	-	5898	24	FSM	ENSG00000058272.19	ENST00000550107.5	2925	24	-204	-2769	-5	403	multi-exon	FALSE	canonical	3	214	junction_12	72.7797256714332	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATCGCCTGTAGTCCCA	10	True	NA	NA	False	AATAAA	-21	NA	79935135	79773159	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_79776016_79778549_79778601_79781814_79781863_79786373_79786479_79788647_79788784_79790466_79790484_79793862_79793929_79795637_79795760_79796781_79796951_79797194_79797396_79798493_79798585_79805591_79805769_79807225_79807331_79808482_79808578_79809794_79810011_79817393_79817519_79820773_79820932_79821077_79821167_79822115_79822191_79828319_79828465_79832331_79832492_79845301_79845421_79872807_79872939_79934694
H1_mix_00019656	chr12	-	443	3	FSM	ENSG00000058272.19	ENST00000550007.1	443	3	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_1	19	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAGAAAAGAAGGAGTCA	NA	False	NA	NA	False	GATAAA	-8	NA	79805816	79797268	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_79797396_79798493_79798585_79805591
H1_mix_00019660	chr12	-	6121	6	FSM	ENSG00000111052.8	ENST00000552864.6	6121	6	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	12.3385574521497	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAAGTATTGTTTTCATT	2	True	NA	0	True	AGTAAA	-17	NA	80937934	80792519	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_80797727_80811464_80811684_80845729_80845940_80848250_80848323_80889250_80889370_80937640
H1_mix_00019661	chr12	-	864	4	ISM	ENSG00000111052.8	ENST00000549417.5	905	5	-230	3872	0	3	5prime_fragment	FALSE	canonical	3	117	junction_1	1.69967317119759	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTCTCATTTCATTATG	2	True	NA	5	True	ATTAAA	-25	NA	80937934	80845560	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_80845940_80848250_80848323_80889250_80889370_80937640
H1_mix_00019662	chr12	-	932	5	ISM	ENSG00000111052.8	ENST00000261203.7	989	7	-154	47995	0	-6	5prime_fragment	FALSE	canonical	3	10	junction_2	54.2695817194126	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAATTTTTATGTCTCAT	2	True	NA	-4	True	ATTAAA	-16	NA	80937934	80845569	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_80845940_80848098_80848176_80848250_80848323_80889250_80889370_80937640
H1_mix_00019665	chr12	-	1604	4	FSM	ENSG00000133773.12	ENST00000256151.8	1585	4	-22	3	0	-3	multi-exon	FALSE	canonical	3	303	junction_1	36.1509182302316	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACAGTCTGAAATTGCA	-12	True	NA	NA	False	AATAAA	-18	NA	82358409	82352305	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_82353313_82354494_82354595_82356959_82357270_82358222
H1_mix_00019668	chr12	-	4635	2	FSM	ENSG00000072041.18	ENST00000681939.1	2915	2	-1706	-14	1636	0	multi-exon	FALSE	canonical	3	59	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATATGCTGTTTTGATATA	NA	False	NA	-1	True	AATAAA	-19	NA	84865557	84859490	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_84862007_84863438
H1_mix_00019670	chr12	-	5039	5	FSM	ENSG00000072041.18	ENST00000450363.4	4312	5	77	-804	0	138	multi-exon	FALSE	canonical	3	173	junction_1	17.8518206354422	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATGTTTGTTGAATTA	-2	True	NA	NA	False	NA	NA	NA	84912799	84880040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_84884041_84885434_84885562_84885910_84886069_84891831_84892309_84912522
H1_mix_00019672	chr12	-	1844	3	NIC	ENSG00000072041.18	novel	726	3	NA	NA	-73	44	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	89	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCGTATGTAAATTTTTTC	9390	False	NA	0	True	AATAAA	-13	NA	84913389	84890750	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_84892309_84912522_84912706_84913286
H1_mix_00019674	chr12	-	25116	4	ISM	ENSG00000182050.14	ENST00000611864.5	25268	5	206668	-1	206544	0	3prime_fragment	FALSE	canonical	3	22	junction_2	2.49443825784929	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGCTTTCATCTTCTGAA	NA	False	NA	NA	False	TATAAA	-2	NA	86049723	85955665	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_85980431_85983522_85983671_85989399_85989553_86049673
H1_mix_00019675	chr12	-	10816	45	FSM	ENSG00000198707.17	ENST00000676363.1	13334	45	2518	0	-770	0	multi-exon	TRUE	canonical	3	18	junction_43	11.0094578048615	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATAAAAGTATATACTTGA	NA	False	NA	-38	True	AATAAA	-27	NA	88130481	88049015	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_88049415_88050353_88050434_88053651_88053747_88054339_88054414_88055575_88055718_88058847_88059021_88059897_88060021_88060829_88060995_88062691_88062779_88063980_88064116_88068521_88068646_88071293_88071450_88071780_88071927_88077221_88077345_88077696_88077919_88079091_88079230_88080181_88080396_88083030_88083231_88083846_88083955_88084585_88084853_88086038_88086174_88086390_88086499_88087779_88087945_88089031_88089488_88090727_88090840_88092680_88092833_88093769_88093976_88096887_88097000_88102837_88106906_88106995_88107099_88109065_88109182_88111201_88111352_88111693_88111859_88114419_88114563_88115097_88115183_88117032_88117146_88118482_88118571_88118642_88118744_88120113_88120277_88120996_88121167_88125245_88125370_88126315_88126439_88128945_88129036_88129693_88129877_88130267
H1_mix_00019676	chr12	-	7659	53	FSM	ENSG00000198707.17	ENST00000675408.1	7670	53	11	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	11.6178518775426	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATAAAAGTATATACTTGA	-6	True	NA	-38	True	AATAAA	-27	NA	88142088	88049015	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_88049415_88050353_88050434_88053651_88053747_88054339_88054414_88055575_88055718_88058847_88059021_88059897_88060021_88062691_88062779_88063980_88064116_88068521_88068646_88071293_88071450_88071780_88071927_88077221_88077345_88077696_88077919_88079091_88079230_88080181_88080396_88083030_88083231_88083846_88083955_88084585_88084853_88086038_88086174_88086390_88086499_88087779_88087945_88089031_88089488_88090727_88090840_88092680_88092833_88093769_88093976_88096887_88097000_88102837_88103012_88106674_88106906_88106995_88107099_88109065_88109182_88111201_88111352_88111693_88111859_88114419_88114563_88115097_88115183_88117032_88117146_88118482_88118571_88118642_88118744_88120113_88120277_88120996_88121167_88125245_88125370_88126315_88126439_88128945_88129036_88129693_88129877_88130267_88130421_88130544_88130566_88131164_88131219_88136642_88136787_88139144_88139192_88139494_88139565_88140955_88141034_88141205_88141335_88141899
H1_mix_00019677	chr12	-	7824	54	FSM	ENSG00000198707.17	ENST00000552810.6	7824	54	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_44	10.8661555164031	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATAAAAGTATATACTTGA	-6	True	NA	-38	True	AATAAA	-27	NA	88142088	88049015	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_88049415_88050353_88050434_88053651_88053747_88054339_88054414_88055575_88055718_88058847_88059021_88059897_88060021_88060829_88060995_88062691_88062779_88063980_88064116_88068521_88068646_88071293_88071450_88071780_88071927_88077221_88077345_88077696_88077919_88079091_88079230_88080181_88080396_88083030_88083231_88083846_88083955_88084585_88084853_88086038_88086174_88086390_88086499_88087779_88087945_88089031_88089488_88090727_88090840_88092680_88092833_88093769_88093976_88096887_88097000_88102837_88103012_88106674_88106906_88106995_88107099_88109065_88109182_88111201_88111352_88111693_88111859_88114419_88114563_88115097_88115183_88117032_88117146_88118482_88118571_88118642_88118744_88120113_88120277_88120996_88121167_88125245_88125370_88126315_88126439_88128945_88129036_88129693_88129877_88130267_88130421_88130544_88130566_88131164_88131219_88136642_88136787_88139144_88139192_88139494_88139565_88140955_88141034_88141205_88141335_88141899
H1_mix_00019679	chr12	-	1432	6	FSM	ENSG00000198707.17	ENST00000552770.3	1458	6	26	0	15	0	multi-exon	FALSE	canonical	3	28	junction_3	5.23832034148352	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTGGTAACTGTCCTGT	9	True	NA	NA	False	AGTAAA	-21	NA	88142073	88135852	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_88136787_88139144_88139192_88139494_88139565_88140955_88141034_88141205_88141335_88141899
H1_mix_00019681	chr12	-	5668	9	FSM	ENSG00000049130.16	ENST00000347404.10	5737	9	73	-4	73	4	multi-exon	FALSE	canonical	2	2	junction_4	7.72576857018122	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCCTGTCATTTTATAT	NA	False	NA	NA	False	AATAAA	-23	NA	88580778	88492788	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_88497182_88505158_88505236_88506310_88506379_88507027_88507138_88516333_88516491_88518696_88518868_88532440_88532504_88545751_88545866_88580263
H1_mix_00019683	chr12	-	3190	2	FSM	ENSG00000139318.8	ENST00000308385.6	1959	2	-96	-1135	0	1	multi-exon	FALSE	canonical	3	31	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAGAACGTACTTATATT	-4	True	NA	NA	False	AATAAA	-24	NA	89352501	89347233	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_89349562_89351639
H1_mix_00019684	chr12	-	5840	2	FSM	ENSG00000139323.14	ENST00000549591.1	5840	2	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTCCTTTTCTTTTTAA	NA	False	NA	NA	False	AATAAA	-25	NA	89429460	89419717	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_89421258_89425160
H1_mix_00019685	chr12	-	3096	10	FSM	ENSG00000139323.14	ENST00000393179.8	3096	10	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_9	23.3476146771166	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTCCTTTTCTTTTTAA	642	False	NA	NA	False	AATAAA	-25	NA	89525615	89419717	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_89421258_89425160_89425380_89459637_89459719_89466769_89466923_89467616_89467686_89470360_89470495_89471613_89471730_89472167_89472276_89491935_89492116_89525119
H1_mix_00019686	chr12	-	2897	11	NIC	ENSG00000139323.14	novel	3024	12	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_2	32.8	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTCCTTTTCTTTTTAA	29	True	NA	NA	False	AATAAA	-25	NA	89526001	89419717	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_89421258_89425160_89425380_89466769_89466923_89467616_89467686_89470360_89470495_89471613_89471730_89472167_89472276_89491935_89492116_89497170_89497343_89525119_89525205_89525880
H1_mix_00019690	chr12	-	5385	1	FSM	ENSG00000257594.4	ENST00000529983.3	5385	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATTGTGATTATTTTAGC	-18	True	NA	NA	False	AATAAA	-26	NA	89524796	89519411	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_89519400_89524800
H1_mix_00019695	chr12	-	4309	2	FSM	ENSG00000133639.6	ENST00000256015.5	4629	2	0	320	0	-320	multi-exon	FALSE	canonical	3	205	junction_1	0	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCCTTAAATCATTTAATA	0	True	NA	NA	False	NA	NA	NA	92145846	92140597	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_92144448_92145387
H1_mix_00019696	chr12	-	8248	29	FSM	ENSG00000102189.17	ENST00000322349.13	9839	29	0	1591	0	-1591	multi-exon	FALSE	canonical	3	35	junction_22	10.279760181432	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCATTTAATACCCAGATGA	-9	True	NA	NA	False	TATAAA	-36	NA	92929295	92772227	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_92776134_92776843_92776943_92777542_92777664_92777940_92778180_92779114_92779301_92780279_92780412_92781949_92782136_92787866_92788050_92798891_92799087_92801599_92801702_92802403_92802735_92809016_92809157_92811278_92811435_92812979_92813094_92816199_92816401_92819307_92819512_92826165_92826286_92827911_92828062_92832511_92832851_92842464_92842582_92851110_92851267_92852174_92852297_92852911_92853026_92853914_92853955_92857274_92857341_92857430_92857486_92864859_92864988_92891628_92891722_92929042
H1_mix_00019697	chr12	-	402	1	FSM	ENSG00000256393.1	ENST00000536425.1	78	1	0	-324	0	324	mono-exon	FALSE	NA	NA	NA	NA	NA	3344	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAGTGTGGCTCACGCCT	41	False	NA	NA	False	ATTAAA	-20	NA	93083675	93083273	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_93083300_93083700
H1_mix_00019701	chr12	-	765	1	FSM	ENSG00000186076.5	ENST00000548270.1	765	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCGGCGGGGAGGATACT	24	False	NA	NA	False	NA	NA	NA	93641586	93640821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_93640800_93641600
H1_mix_00019703	chr12	-	3807	16	FSM	ENSG00000173588.16	ENST00000339839.9	3130	16	0	-677	0	95	multi-exon	FALSE	canonical	0	0	junction_3	27.2432662424232	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGTATACAATAAGAAATAG	5	True	NA	NA	False	TTTAAA	-29	NA	94459946	94307602	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_94308918_94309917_94310108_94312913_94313018_94331699_94331830_94333481_94333640_94335588_94335665_94367793_94367944_94368056_94368202_94369921_94370037_94375885_94376018_94378790_94379043_94400849_94400982_94403169_94403263_94411696_94411848_94412317_94412592_94459556
H1_mix_00019704	chr12	-	3686	17	FSM	ENSG00000173588.16	ENST00000397809.10	3686	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	30.8190282131024	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTGAAAAAAAAAAAAGACAG	12	True	NA	NA	False	AATAAA	-22	NA	94459867	94307697	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_94308918_94309917_94310108_94312913_94313018_94331699_94331830_94333481_94333640_94335588_94335665_94367793_94367944_94368056_94368202_94369921_94370037_94375885_94376018_94378790_94379043_94400849_94400982_94403169_94403263_94411696_94411848_94412317_94412592_94435274_94435328_94459556
H1_mix_00019705	chr12	-	3122	9	FSM	ENSG00000173588.16	ENST00000547575.5	3122	9	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	27.8025965514015	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTCTGAGTTTTAGCCT	-1	True	NA	-9	True	AATAAA	-15	NA	94459952	94368397	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_94370037_94375885_94376018_94378790_94379043_94400849_94400982_94403169_94403263_94411696_94411848_94412317_94412592_94435274_94435328_94459556
H1_mix_00019708	chr12	-	5919	4	FSM	ENSG00000057704.13	ENST00000261226.9	5874	4	-47	2	-47	-2	multi-exon	FALSE	canonical	1	4	junction_3	8.17856276425687	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATTTGTTGGAGCCCATC	-31	True	NA	-3	True	AATAAA	-22	NA	94650604	94567123	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_94571738_94578393_94578530_94581621_94582539_94650352
H1_mix_00019709	chr12	-	618	6	NNC	ENSG00000184752.14	novel	708	5	NA	NA	0	27262	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1739.38662752132	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAAGGCCTTCTATGATC	-7	True	NA	NA	False	NA	NA	NA	95003697	94944065	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_94944092_94960291_94960319_94971329_94971621_94994169_94994258_95002738_95002822_95003594
H1_mix_00019712	chr12	-	698	5	FSM	ENSG00000184752.14	ENST00000684171.1	698	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	1829.19333313896	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCGTGCCTTTTTGCCC	-23	True	NA	NA	False	ATTAAA	-20	NA	95003713	94971327	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_94971621_94974170_94974286_94994169_94994258_95002738_95002822_95003594
H1_mix_00019713	chr12	-	563	4	FSM	ENSG00000184752.14	ENST00000327772.7	562	4	0	-1	0	0	multi-exon	FALSE	canonical	3	3201	junction_1	288.905982400273	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCTTTCGTGCCTTTTT	-7	True	NA	NA	False	ATTAAA	-16	NA	95003697	94971331	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_94971621_94994169_94994258_95002738_95002822_95003594
H1_mix_00019714	chr12	-	709	5	FSM	ENSG00000184752.14	ENST00000684558.1	708	5	0	-1	0	0	multi-exon	FALSE	canonical	2	2	junction_2	1844.82145138764	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCTTTCGTGCCTTTTT	-7	True	NA	NA	False	ATTAAA	-16	NA	95003697	94971331	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_94971621_94991826_94991973_94994169_94994258_95002738_95002822_95003594
H1_mix_00019715	chr12	-	278	3	FSM	ENSG00000184752.14	ENST00000547157.1	276	3	0	-2	0	2	multi-exon	FALSE	canonical	3	238	junction_1	1831.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTTCGTGCCTTTTTGC	-10	True	NA	NA	False	ATTAAA	-18	NA	95003700	94971329	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_94971486_95002805_95002822_95003594
H1_mix_00019716	chr12	-	491	3	FSM	ENSG00000184752.14	ENST00000547986.5	487	3	0	-4	0	0	multi-exon	FALSE	canonical	3	262	junction_1	1819.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCTTTCGTGCCTTTTT	-23	True	NA	NA	False	ATTAAA	-16	NA	95003713	94971331	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_94971621_95002738_95002822_95003594
H1_mix_00019718	chr12	-	2360	14	NIC	ENSG00000120798.17	novel	4058	14	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	39.6341255148318	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTCTAGTCATATTTA	13	True	NA	-3	True	AATAAA	-20	NA	95073599	95021892	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_95022404_95025149_95025256_95028386_95028510_95031348_95031489_95040475_95040598_95049067_95049234_95051761_95051944_95057552_95057644_95057730_95057879_95058309_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
H1_mix_00019722	chr12	-	4817	19	FSM	ENSG00000180263.14	ENST00000546711.5	4568	19	-114	-135	-96	135	multi-exon	FALSE	canonical	3	79	junction_18	15.7111268269606	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGGCGAAACCCCGTCT	-43	True	NA	NA	False	NA	NA	NA	95217578	95085407	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_95085909_95089568_95089697_95091706_95091810_95092698_95092846_95094591_95094695_95105006_95105087_95106953_95107038_95107562_95107632_95108347_95108420_95108502_95108562_95113650_95113702_95134738_95134827_95137521_95137679_95141387_95141540_95152810_95152842_95152925_95152994_95172599_95172745_95208842_95211268_95217224
H1_mix_00019724	chr12	-	4008	6	FSM	ENSG00000136014.12	ENST00000258499.8	4008	6	0	0	0	0	multi-exon	FALSE	canonical	3	475	junction_5	233.198284727826	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGTCTACTCTTTTCTA	6	True	NA	-8	True	ATTAAA	-21	NA	95551476	95516559	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_95518354_95520996_95521203_95524679_95524789_95528806_95529003_95532828_95534327_95551271
H1_mix_00019725	chr12	-	3161	6	FSM	ENSG00000136014.12	ENST00000393091.6	3161	6	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_5	303.738440109249	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAGAAAAAATTATAGGGC	-3	True	NA	74	True	AATAGA	-7	NA	95548844	95517275	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_95518354_95520996_95521203_95524679_95524789_95528806_95529003_95532828_95534327_95548770
H1_mix_00019732	chr12	-	6109	19	FSM	ENSG00000111144.10	ENST00000553041.5	6109	19	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_13	431.109954895357	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAGTGGCATATTCTTTG	123	False	NA	-12	True	AATAAA	-17	NA	96035528	96000832	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_96001107_96002959_96003065_96003837_96003921_96006313_96006410_96009093_96013259_96013749_96013854_96014854_96015000_96015582_96015695_96017043_96017115_96017556_96017581_96018762_96018904_96019167_96019241_96020689_96020759_96021084_96021138_96022146_96022252_96024478_96024548_96027443_96027565_96029054_96029186_96035360
H1_mix_00019733	chr12	-	2005	18	NIC	ENSG00000111144.10	novel	2140	19	NA	NA	2	27	combination_of_known_junctions	TRUE	canonical	3	395	junction_2	253.827053346133	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGTTTAATCTTTTGATT	2	True	NA	18	True	NA	NA	NA	96035585	96000802	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_96001107_96002959_96003065_96006313_96006410_96009093_96009149_96013187_96013259_96013749_96013854_96014854_96015000_96015582_96015695_96017043_96017115_96017556_96017581_96018762_96018904_96019167_96019241_96021084_96021138_96022146_96022252_96024478_96024548_96027443_96027565_96029054_96029186_96035360
H1_mix_00019734	chr12	-	4116	17	FSM	ENSG00000059758.8	ENST00000261211.8	4036	17	0	-80	0	80	multi-exon	FALSE	canonical	3	109	junction_1	29.9309100262588	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGTGTTTGTTTTTTTG	-14	True	NA	NA	False	NA	NA	NA	96400439	96278180	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_96280280_96280807_96280886_96282508_96282600_96283602_96283646_96286042_96286149_96286663_96286762_96289166_96289288_96294998_96295123_96297269_96297333_96297626_96297722_96298868_96298984_96300303_96300361_96311051_96311178_96313320_96313455_96323947_96324113_96334718_96334866_96399985
H1_mix_00019735	chr12	-	4307	16	FSM	ENSG00000059758.8	ENST00000543119.6	2442	16	0	-1865	0	-298	multi-exon	FALSE	canonical	3	167	junction_9	17.4737898961082	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATGTGGTTTTATTGA	94	False	96400496	-11	True	NA	NA	NA	96400480	96278558	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_96280886_96282508_96282600_96283602_96283646_96286042_96286149_96286663_96286762_96289166_96289288_96294998_96295123_96297269_96297333_96297626_96297722_96298868_96298984_96300303_96300361_96311051_96311178_96313320_96313455_96323947_96324113_96334718_96334866_96399985
H1_mix_00019739	chr12	-	715	1	FSM	ENSG00000279798.1	ENST00000624690.1	715	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACAGCCTTTTATAGAGA	NA	False	NA	NA	False	AATAAA	-32	NA	97563971	97563256	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_97563300_97564000
H1_mix_00019740	chr12	-	3356	1	FSM	ENSG00000227825.4	ENST00000554295.1	3311	1	-58	13	-58	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAACCAAAGGCAAAT	-11	True	NA	NA	False	AATAAA	-20	NA	98457203	98453847	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_98453800_98457200
H1_mix_00019741	chr12	-	3362	2	FSM	ENSG00000257167.3	ENST00000548760.2	3357	2	0	-5	0	5	multi-exon	FALSE	canonical	3	48	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTCCAATTTGCATTCA	67	False	NA	-8	True	AATAAA	-30	NA	98516422	98512967	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_98515898_98515990
H1_mix_00019742	chr12	-	1383	2	FSM	ENSG00000166130.15	ENST00000393042.3	1368	2	0	-15	0	15	multi-exon	FALSE	canonical	3	44	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAGCAAGAACTTTATCCA	72	False	NA	1	True	AATAAA	-29	NA	98644954	98613389	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_98614341_98644522
H1_mix_00019743	chr12	-	1560	3	FSM	ENSG00000166130.15	ENST00000342502.6	1645	3	86	-1	-73	1	multi-exon	FALSE	canonical	3	25	junction_1	34.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGCAACTTTACATAGC	-1	False	NA	-13	True	AATAAA	-15	NA	98645027	98613403	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_98614341_98634295_98634414_98644522
H1_mix_00019744	chr12	-	2904	3	FSM	ENSG00000166130.15	ENST00000299157.5	2902	3	0	-2	0	2	multi-exon	FALSE	canonical	3	60	junction_1	17	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACTTTGTTGTTTTAAC	-23	True	NA	NA	False	AATAAA	-19	NA	98644788	98624246	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_98626767_98634295_98634414_98644522
H1_mix_00019747	chr12	-	3156	13	NNC	ENSG00000185046.20	novel	6322	27	NA	NA	56	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	14.3553609807935	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGCTTGGCATCGTTCT	1282	False	NA	1	True	AATAAA	-18	NA	99154659	98743973	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_98745850_98751354_98751523_98773041_98773180_98781116_98781204_98782125_98782138_98798933_98799006_98800996_98801126_98829173_98829354_98832028_98832137_99053156_99053310_99084924_99085024_99154288_99154396_99154632
H1_mix_00019750	chr12	-	628	1	FSM	ENSG00000214203.4	ENST00000482189.1	787	1	-6	165	-6	-165	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACATGAAAGATGCCAACAG	NA	False	NA	NA	False	NA	NA	NA	100009844	100009216	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_100009200_100009800
H1_mix_00019753	chr12	-	6901	21	FSM	ENSG00000111647.13	ENST00000279907.12	5198	21	50	-1753	0	1753	multi-exon	FALSE	canonical	3	136	junction_6	16.9147864308125	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGTAGGTATTATTCAAAT	35	False	NA	NA	False	CATAAA	-15	NA	100142824	100035318	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_100037756_100039595_100039790_100047529_100047639_100047942_100048197_100050167_100050319_100051078_100051222_100057570_100057747_100058028_100059534_100059849_100060044_100072671_100072814_100083015_100083135_100084475_100084659_100086274_100086359_100088914_100089096_100095666_100095838_100097364_100097506_100098351_100098542_100102765_100102858_100103912_100103952_100108385_100108549_100142591
H1_mix_00019754	chr12	-	2057	13	FSM	ENSG00000111647.13	ENST00000356828.7	2023	13	-34	0	-7	0	multi-exon	FALSE	canonical	3	10	junction_1	45.9915451167084	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAAATTTTATTCTA	-22	True	NA	NA	False	AATAAA	-21	NA	100142881	100069907	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_100070170_100072671_100072814_100083015_100083135_100084475_100084659_100086274_100086359_100088914_100089096_100095666_100095838_100097364_100097506_100098351_100098542_100102765_100102858_100103912_100103952_100108385_100108549_100142591
H1_mix_00019756	chr12	-	5224	6	FSM	ENSG00000238105.7	ENST00000537988.5	5266	6	64	-22	64	0	multi-exon	FALSE	canonical	0	0	junction_4	6.08604962188118	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGGTATGGGATTTTAA	NA	False	NA	-8	True	AATAAA	-16	NA	100162770	100156416	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_100157059_100157164_100157446_100157527_100157740_100157996_100158078_100158678_100158874_100158957
H1_mix_00019757	chr12	-	5229	15	Fusion	ENSG00000238105.7_ENSG00000257489.6	novel	2343	9	NA	NA	142	5	intron_retention	FALSE	canonical	2	5	junction_13	13.5879598564768	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGATGGAAGAAATAGA	393	False	NA	NA	False	NA	NA	NA	100199620	100163236	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr12_-_100166141_100166330_100166637_100167069_100167142_100167335_100167444_100167549_100167640_100168451_100168634_100168923_100169200_100170564_100170668_100170936_100170988_100173111_100173685_100177042_100177121_100180552_100180717_100195581_100195674_100198843_100198973_100199519
H1_mix_00019758	chr12	-	2343	9	FSM	ENSG00000238105.7	ENST00000421840.2	2343	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	11.2694276695846	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTCTGAGTATGTTAT	NA	False	NA	-6	True	NA	NA	NA	100173245	100165047	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_100166141_100166330_100166637_100167335_100167444_100167549_100167640_100168451_100168634_100168923_100169200_100170564_100170668_100170936_100170988_100173111
H1_mix_00019760	chr12	-	1067	4	FSM	ENSG00000166153.17	ENST00000551642.1	1033	4	-32	-2	-8	2	multi-exon	FALSE	canonical	3	25	junction_3	3.74165738677394	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTGGAAATCAGAGTGGT	NA	False	NA	-12	True	AATAAA	-24	NA	100267087	100255870	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_100256227_100262263_100262410_100263496_100263894_100266919
H1_mix_00019761	chr12	-	3292	3	FSM	ENSG00000120805.14	ENST00000550597.1	768	3	-116	-2408	-116	17	multi-exon	FALSE	canonical	0	0	junction_1	269	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTGCCTTAGTATTTTA	6489	False	NA	16	True	ATTAAA	-44	NA	101401602	101393098	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_101395671_101396398_101396578_101401061
H1_mix_00019762	chr12	-	3188	6	FSM	ENSG00000120805.14	ENST00000261636.13	3197	6	26	-17	0	17	multi-exon	FALSE	canonical	0	0	junction_1	212.245706670359	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTGCCTTAGTATTTTA	17	True	NA	16	True	ATTAAA	-44	NA	101407746	101393098	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_101395671_101396398_101396578_101401061_101401174_101402864_101402947_101405843_101405982_101407641
H1_mix_00019763	chr12	-	879	5	FSM	ENSG00000120805.14	ENST00000551671.5	879	5	0	0	0	0	multi-exon	FALSE	canonical	3	471	junction_4	42.5852086997352	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATTCCTTATCCTTCAGG	10	True	NA	NA	False	NA	NA	NA	101407753	101396142	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_101396578_101401061_101401174_101402864_101402947_101405843_101405982_101407641
H1_mix_00019765	chr12	-	5720	21	FSM	ENSG00000111670.16	ENST00000299314.12	5720	21	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_14	22.8724725379658	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTTGATTTTTAAATCTT	-10	True	NA	-21	True	CATAAA	-20	NA	101830959	101745498	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_101747242_101749100_101749192_101753371_101753540_101757211_101757311_101757571_101757658_101760029_101760144_101761126_101761347_101761563_101761764_101764201_101765305_101766090_101766295_101768036_101768161_101770020_101770192_101770405_101770586_101770995_101771158_101780151_101780287_101780556_101780622_101786011_101786218_101788547_101788590_101789937_101790058_101796676_101796763_101830558
H1_mix_00019768	chr12	-	902	7	FSM	ENSG00000120860.11	ENST00000240079.11	882	7	0	-20	0	20	multi-exon	FALSE	canonical	3	144	junction_1	10.3387082795139	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCACGGTGGCTCACGCCT	15	True	NA	NA	False	NA	NA	NA	102061991	102012819	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_102013193_102025973_102026039_102039867_102039979_102044104_102044213_102046053_102046120_102061247_102061347_102061911
H1_mix_00019769	chr12	-	966	8	FSM	ENSG00000120860.11	ENST00000544341.5	945	8	0	-21	0	6	multi-exon	FALSE	canonical	2	3	junction_2	73.2507574663072	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGGCCTCAAAATGAAAAA	8	True	NA	19	True	AATAAA	-39	NA	102062073	102012920	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_102013193_102017719_102017806_102025973_102026039_102039867_102039976_102044104_102044213_102046053_102046120_102061247_102061347_102061911
H1_mix_00019770	chr12	-	886	7	FSM	ENSG00000120860.11	ENST00000545679.5	865	7	0	-21	0	6	multi-exon	FALSE	canonical	3	27	junction_3	49.5333781964803	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGGCCTCAAAATGAAAAA	2	True	NA	19	True	AATAAA	-39	NA	102062079	102012920	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_102013193_102025973_102026039_102039867_102039976_102044104_102044213_102046053_102046120_102061247_102061347_102061911
H1_mix_00019779	chr12	-	7249	14	FSM	ENSG00000111696.12	ENST00000392876.8	7244	14	0	-5	0	5	multi-exon	FALSE	canonical	3	13	junction_1	7.53060815416641	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTATTGTCAGTCACCT	-7	True	NA	-5	True	AATAAA	-19	NA	103841234	103772304	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_103778082_103780299_103780365_103785334_103785476_103787440_103787528_103788837_103788920_103793163_103793266_103793409_103793513_103793936_103793998_103796893_103797032_103798586_103798678_103806321_103806378_103806854_103806930_103814936_103815122_103840948
H1_mix_00019786	chr12	-	3508	9	FSM	ENSG00000120837.8	ENST00000551446.6	3508	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_7	265.099509618558	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGTTAACCTATCATAAAAA	-1	True	NA	-38	True	NA	NA	NA	104138241	104117117	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_104119770_104120399_104120480_104121239_104121322_104123225_104123424_104126113_104126245_104128423_104128518_104131753_104131839_104135447_104135533_104138140
H1_mix_00019787	chr12	-	1727	8	FSM	ENSG00000120837.8	ENST00000551727.5	1727	8	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_7	211.544948666052	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCCTTTTAATAAAATATAA	3	True	NA	-42	True	NA	NA	NA	104138017	104119354	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_104119770_104120399_104120480_104121239_104121322_104123225_104123424_104126113_104126245_104128423_104128518_104135447_104135533_104137375
H1_mix_00019793	chr12	-	2190	21	FSM	ENSG00000136044.12	ENST00000551662.5	2190	21	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_15	40.6648189470948	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCGTTTGTGGAATGTAAT	49	True	NA	NA	False	NA	NA	NA	105236083	105174207	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_105174449_105176034_105176083_105176875_105177017_105177225_105177263_105188272_105188448_105189771_105189825_105189990_105190156_105195260_105195350_105195444_105195502_105195584_105195628_105197764_105197954_105199372_105199532_105203702_105203786_105207060_105207208_105207970_105208048_105208157_105208200_105211229_105211318_105217068_105217141_105217665_105217726_105229124_105229224_105235958
H1_mix_00019798	chr12	-	1577	1	FSM	ENSG00000260329.1	ENST00000570282.1	1469	1	-119	11	-119	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTCAAAGCAGCAGTTGAA	NA	False	NA	NA	False	ATTAAA	-7	NA	106955616	106954039	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_106954000_106955600
H1_mix_00019799	chr12	-	2007	3	FSM	ENSG00000120832.10	ENST00000240050.9	1784	3	0	-223	0	223	multi-exon	FALSE	canonical	3	51	junction_2	8	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATAAATTACTGTCTTTG	4	True	NA	NA	False	NA	NA	NA	106987146	106977053	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_106978772_106985114_106985226_106986968
H1_mix_00019800	chr12	-	3760	2	FSM	ENSG00000120832.10	ENST00000552029.1	3235	2	-30	-495	4	223	multi-exon	FALSE	canonical	3	67	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATAAATTACTGTCTTTG	-6	True	NA	NA	False	NA	NA	NA	106987156	106977053	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_106978772_106985114
H1_mix_00019801	chr12	-	1777	3	FSM	ENSG00000120832.10	ENST00000392830.6	1763	3	0	-14	0	0	multi-exon	FALSE	canonical	3	15	junction_2	26	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACTTCTAAGAAATGGACA	1	True	NA	NA	False	ATTAAA	-32	NA	106987149	106977276	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_106978772_106985114_106985216_106986968
H1_mix_00019804	chr12	-	1746	4	FSM	ENSG00000008405.12	ENST00000549356.1	621	4	0	-1125	0	2	multi-exon	FALSE	canonical	3	219	junction_2	7.03957069398096	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTACGTGTTTTTTTTT	NA	False	NA	-3	True	ATTAAA	-21	NA	106997539	106991361	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_106992891_106992964_106993037_106997293_106997387_106997487
H1_mix_00019806	chr12	-	471	3	FSM	ENSG00000008405.12	ENST00000546722.1	471	3	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	15.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATAATCCACGCTTTG	NA	False	NA	NA	False	NA	NA	NA	107001851	106999788	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_107000083_107001279_107001369_107001763
H1_mix_00019807	chr12	-	4241	12	FSM	ENSG00000110851.12	ENST00000228437.10	4182	12	-54	-5	-54	5	multi-exon	FALSE	canonical	3	62	junction_6	8.48625529462906	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCTGGTAGTCTCATTT	NA	False	NA	NA	False	ATTAAA	-25	NA	107761191	107732865	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_107734523_107739382_107739552_107740945_107741261_107742220_107742349_107743196_107743283_107744542_107744662_107746274_107746425_107751414_107752210_107753923_107754110_107756831_107756966_107760504_107760772_107760956
H1_mix_00019808	chr12	-	640	3	FSM	ENSG00000110851.12	ENST00000547188.1	640	3	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	7	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGATCGAGGGGTGATGT	230	False	NA	NA	False	NA	NA	NA	107760928	107754027	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_107754110_107756831_107756966_107760504
H1_mix_00019809	chr12	-	1927	2	Genic_Genomic	ENSG00000258072.1	novel	679	1	NA	NA	215	21476	multi-exon	FALSE	canonical	3	19	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAACCAGGTGTTTCTAC	16	True	NA	NA	False	NA	NA	NA	107903733	107881793	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr12_-_107882994_107903006
H1_mix_00019811	chr12	-	4572	19	FSM	ENSG00000075856.12	ENST00000546815.6	4154	19	0	-418	0	418	multi-exon	FALSE	canonical	3	284	junction_10	43.389564655429	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGAAGGCTGATGGAC	-4	True	NA	NA	False	NA	NA	NA	108561173	108521795	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_108523635_108524315_108524507_108525456_108525610_108526098_108526554_108530141_108530311_108531203_108531281_108532221_108532335_108535358_108535469_108536513_108536573_108536707_108536786_108537487_108537596_108538064_108538204_108538933_108539090_108543027_108543153_108544426_108544479_108545138_108545324_108547886_108547992_108549087_108549215_108560842
H1_mix_00019817	chr12	-	683	4	FSM	ENSG00000110880.11	ENST00000547361.1	683	4	0	0	0	0	multi-exon	FALSE	canonical	3	546	junction_1	9.39266853573691	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCACTTTTTTTTTTTT	NA	False	NA	NA	False	AAAAAG	-11	NA	108658822	108652044	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_108652418_108654305_108654411_108657303_108657424_108658737
H1_mix_00019819	chr12	-	12664	15	FSM	ENSG00000084112.15	ENST00000326495.10	13034	15	0	370	0	-370	multi-exon	TRUE	canonical	3	27	junction_5	11.4866826173191	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCACATGTATTACCAAGT	-4	True	NA	NA	False	NA	NA	NA	108857583	108778560	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_108789245_108792285_108792830_108798999_108799201_108800779_108800927_108802321_108802369_108805055_108805185_108806300_108806395_108807632_108807828_108809692_108809759_108811259_108811329_108817037_108817160_108818248_108818314_108823257_108823362_108852637_108852679_108857427
H1_mix_00019820	chr12	-	5621	7	FSM	ENSG00000084112.15	ENST00000546433.5	5621	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	14.4452991200136	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTCTGCCTCACATTAAT	NA	False	NA	NA	False	TATAAA	-16	NA	108807690	108784796	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_108789245_108792285_108792830_108798999_108799201_108800779_108800927_108805055_108805185_108806300_108806395_108807632
H1_mix_00019821	chr12	-	2349	14	FSM	ENSG00000084112.15	ENST00000551165.5	2354	14	0	5	0	2	multi-exon	FALSE	canonical	3	27	junction_4	11.4633452370444	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGCCTTTATCGATATA	29	False	NA	-11	True	ATTAAA	-21	NA	108857590	108791923	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_108792830_108798999_108799201_108800779_108800927_108802321_108802369_108805055_108805185_108806300_108806395_108807632_108807828_108809692_108809759_108811259_108811329_108817037_108817160_108818248_108818314_108823257_108823362_108852637_108852679_108857427
H1_mix_00019822	chr12	-	815	3	NIC	ENSG00000189046.11	novel	1030	4	NA	NA	9	-4	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	7	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTCTCTTTTCTCTTT	17	True	NA	-6	True	AATAAA	-13	NA	109093460	109088192	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_109088513_109092506_109092788_109093246
H1_mix_00019823	chr12	-	1179	4	FSM	ENSG00000189046.11	ENST00000429722.3	1180	4	0	1	0	-1	multi-exon	FALSE	canonical	3	68	junction_3	27.9404127862612	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTCTTTTCTCTTTCCC	5	True	NA	-3	True	AATAAA	-16	NA	109093472	109088189	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_109088513_109090008_109090208_109092506_109092938_109093246
H1_mix_00019825	chr12	-	1062	4	NIC	ENSG00000189046.11	novel	1180	4	NA	NA	11	-1	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	54.1623075169029	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTCTTTTCTCTTTCCC	5775	False	NA	-3	True	AATAAA	-16	NA	109093458	109088189	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_109088513_109090008_109090208_109092506_109092938_109093349
H1_mix_00019829	chr12	-	1188	10	FSM	ENSG00000139428.12	ENST00000537496.5	1188	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	65.9848467452945	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGCCGTGTGTGTGTG	9	True	NA	-6	True	AATAAA	-11	NA	109573503	109556702	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_109557137_109559095_109559156_109561039_109561105_109561242_109561330_109561419_109561518_109561779_109561853_109565118_109565177_109568769_109568864_109571648_109571711_109573346
H1_mix_00019832	chr12	-	2409	5	FSM	ENSG00000139433.11	ENST00000318348.9	2407	5	0	-2	0	2	multi-exon	FALSE	canonical	3	216	junction_1	6.83282518435822	163	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCACTGTATTGGTTC	-2	True	NA	-7	True	AATAAA	-24	NA	109880541	109850942	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_109852738_109855618_109855770_109857525_109857660_109858682_109858742_109880271
H1_mix_00019833	chr12	-	5456	19	FSM	ENSG00000139436.22	ENST00000361006.9	5444	19	0	-12	0	12	multi-exon	FALSE	canonical	3	32	junction_4	21.1479940968638	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGCTCCCCATCAATT	10	True	NA	1	True	AATAAA	-28	NA	109996304	109929791	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_109933191_109934021_109934086_109938379_109938569_109939164_109939248_109947255_109947505_109951166_109951317_109953091_109953235_109959846_109959959_109961277_109961376_109961612_109961686_109965525_109965578_109967457_109967504_109980951_109981047_109983372_109983504_109983607_109983695_109988962_109989069_109989689_109989803_109991626_109991761_109996172
H1_mix_00019834	chr12	-	5610	20	FSM	ENSG00000139436.22	ENST00000355312.8	5598	20	0	-12	0	12	multi-exon	FALSE	canonical	3	16	junction_4	25.8963414137009	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGCTCCCCATCAATT	-5	True	NA	1	True	AATAAA	-28	NA	109996368	109929791	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_109933191_109934021_109934086_109938379_109938569_109939164_109939248_109945259_109945350_109947255_109947505_109951166_109951317_109953091_109953235_109959846_109959959_109961277_109961376_109961612_109961686_109965525_109965578_109967457_109967504_109980951_109981047_109983372_109983504_109983607_109983695_109988962_109989069_109989689_109989803_109991626_109991761_109996172
H1_mix_00019835	chr12	-	2989	15	FSM	ENSG00000139436.22	ENST00000547815.5	2989	15	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	22.3373942901465	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCCAATGGGAGAAGCGAG	18	True	NA	NA	False	NA	NA	NA	109996296	109947321	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_109948847_109951166_109951317_109953091_109953235_109959846_109959959_109961277_109961376_109961612_109961686_109965525_109965578_109967457_109967504_109980951_109981047_109983372_109983504_109983607_109983695_109988962_109989069_109989689_109989803_109991626_109991761_109996172
H1_mix_00019836	chr12	-	1746	2	FSM	ENSG00000174456.16	ENST00000546651.3	1755	2	0	9	0	-9	multi-exon	FALSE	canonical	3	77	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTATCTCCTTTTTTGGCTG	-3	True	NA	-5	True	GATAAA	-15	NA	110048555	110027036	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_110028590_110048362
H1_mix_00019837	chr12	-	1594	3	FSM	ENSG00000174456.16	ENST00000551185.2	496	3	10	-1108	0	4	multi-exon	FALSE	canonical	1	2	junction_1	4	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTACTCCACCAGTTA	-3	True	NA	-12	True	ATTAAA	-22	NA	110048555	110041172	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_110042460_110044419_110044534_110048362
H1_mix_00019838	chr12	-	1441	2	FSM	ENSG00000174456.16	ENST00000615315.2	1443	2	2	0	2	0	multi-exon	FALSE	canonical	3	83	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGTTTTACTCCACCA	-12	True	NA	-16	True	ATTAAA	-18	NA	110048520	110041176	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_110042460_110048362
H1_mix_00019839	chr12	-	3023	11	FSM	ENSG00000196510.14	ENST00000455511.9	3023	11	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_7	39.0466387797977	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGAGTCTTTCAGTCTA	-12	True	NA	-2	True	AAAAAG	-3	NA	110403708	110372899	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_110374334_110376065_110376217_110377392_110377618_110381751_110381949_110382842_110382961_110386326_110386470_110387738_110387893_110388511_110388624_110395100_110395221_110396265_110396453_110403526
H1_mix_00019842	chr12	-	2207	10	FSM	ENSG00000196510.14	ENST00000450008.3	2200	10	0	-7	0	-3	multi-exon	FALSE	canonical	3	331	junction_6	37.2870082958438	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGGTTTCTTTGAGGGT	-34	True	NA	NA	False	AATAAA	-27	NA	110403730	110375469	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_110376217_110377392_110377618_110381751_110381949_110382842_110382961_110386326_110386470_110387738_110387893_110388511_110388624_110395100_110395221_110396265_110396453_110403526
H1_mix_00019848	chr12	-	1477	8	FSM	ENSG00000111231.9	ENST00000228827.8	1457	8	0	-20	0	20	multi-exon	FALSE	canonical	3	587	junction_4	43.0377148319841	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCATTTTAATTAAGCAAAA	-4	True	NA	7	True	NA	NA	NA	110468257	110452465	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_110453097_110453742_110453872_110455585_110455683_110455814_110455931_110457509_110457635_110459694_110459863_110465105_110465215_110468155
H1_mix_00019849	chr12	-	1514	8	FSM	ENSG00000111231.9	ENST00000537466.6	1491	8	0	-23	0	20	multi-exon	FALSE	canonical	3	26	junction_7	223.69841213526	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCATTTTAATTAAGCAAAA	-11	True	NA	7	True	NA	NA	NA	110468264	110452465	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_110453097_110453742_110453872_110455585_110455683_110455814_110455931_110457509_110457635_110459694_110459863_110465105_110465215_110468125
H1_mix_00019850	chr12	-	1538	4	FSM	ENSG00000111237.19	ENST00000549578.6	1531	4	0	-7	0	7	multi-exon	FALSE	canonical	3	1497	junction_3	162.485554913523	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAACAAATTTAGCA	-13	True	NA	NA	False	AAAACA	-11	NA	110502111	110491075	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_110492123_110492995_110493232_110496011_110496204_110502048
H1_mix_00019851	chr12	-	1091	5	FSM	ENSG00000111237.19	ENST00000360579.11	1091	5	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_3	860.546919115977	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTCTCTTACATTGTGT	-1	True	NA	-23	True	ATTAAA	-23	NA	110502099	110491522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_110492123_110492995_110493232_110496011_110496204_110499534_110499547_110502048
H1_mix_00019852	chr12	-	997	5	FSM	ENSG00000111237.19	ENST00000447578.6	996	5	0	-1	0	0	multi-exon	FALSE	canonical	3	14	junction_4	901.522046319445	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTGATAACCTGTATTT	20	True	NA	-7	True	AATAAA	-18	NA	110502078	110491623	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_110492123_110492995_110493232_110496011_110496204_110498819_110498860_110502048
H1_mix_00019853	chr12	-	1046	5	FSM	ENSG00000111237.19	ENST00000549970.5	818	5	33	-261	0	0	multi-exon	TRUE	canonical	3	16	junction_3	881.41987724353	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTTGATAACCTGTATT	20	True	NA	-8	True	AATAAA	-17	NA	110502078	110491624	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_110492123_110492995_110493232_110496011_110496204_110499456_110499547_110502048
H1_mix_00019854	chr12	-	598	2	FSM	ENSG00000111237.19	ENST00000548539.1	598	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATATTTGGAACTTTATT	5881	False	NA	-114	True	AAGAAA	-28	NA	110496217	110491730	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_110492123_110496011
H1_mix_00019858	chr12	-	2432	8	NNC	ENSG00000186298.12	novel	1472	8	NA	NA	0	41246	intron_retention	FALSE	non_canonical	0	0	junction_1	636.256558444206	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATGAAATGGAAAATAAGA	65	False	NA	NA	False	AAAAAG	-6	NA	110742867	110678433	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_110678469_110719810_110721166_110722134_110722270_110722471_110722696_110724659_110724765_110730528_110730760_110731769_110731902_110742652
H1_mix_00019860	chr12	-	2554	7	FSM	ENSG00000186298.12	ENST00000335007.10	2552	7	0	-2	0	2	multi-exon	FALSE	canonical	3	1690	junction_2	103.125597641366	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCCTCTACCATTTGGGG	1	True	NA	NA	False	AATAGA	-18	NA	110742891	110719677	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_110721166_110722134_110722270_110722471_110722696_110724659_110724765_110730528_110730760_110731769_110731902_110742652
H1_mix_00019861	chr12	-	1472	8	FSM	ENSG00000186298.12	ENST00000340766.9	1472	8	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	614.469673451698	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTTCTCAGTGTCTATT	NA	False	NA	-8	True	ATTAAA	-14	NA	110742939	110719907	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_110720205_110721104_110721166_110722134_110722270_110722471_110722696_110724659_110724765_110730528_110730760_110731769_110731902_110742652
H1_mix_00019864	chr12	-	2228	6	FSM	ENSG00000186298.12	ENST00000550991.5	1882	6	34	-380	0	0	multi-exon	FALSE	canonical	3	1690	junction_1	108.43541856792	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTATAACAGCAAATGAAAGA	93	False	NA	NA	False	NA	NA	NA	110742839	110720920	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_110722270_110722471_110722696_110724659_110724765_110730528_110730760_110731769_110731902_110742652
H1_mix_00019865	chr12	-	2458	5	FSM	ENSG00000186298.12	ENST00000551676.5	1581	5	-28	-849	0	0	multi-exon	FALSE	canonical	3	1706	junction_2	100.760545353824	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTATAACAGCAAATGAAAGA	65	False	NA	NA	False	NA	NA	NA	110742867	110720920	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_110722696_110724659_110724765_110730528_110730760_110731769_110731902_110742652
H1_mix_00019866	chr12	-	3120	3	FSM	ENSG00000198324.14	ENST00000683047.1	3114	3	0	-6	0	6	multi-exon	FALSE	canonical	3	43	junction_1	10	178	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTCATTTTTTTTCCC	1	True	NA	1	True	AGTAAA	-21	NA	111369095	111360672	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_111363464_111366112_111366258_111368911
H1_mix_00019867	chr12	-	1692	8	NIC	ENSG00000204842.18	novel	4347	25	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_6	36.2491379207837	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTTAGTGTGTGTCTGT	2692	False	NA	-7	True	AATAAA	-45	NA	111485849	111452213	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_111452841_111453676_111453846_111456028_111456257_111457213_111457360_111470107_111470241_111470557_111470743_111485264_111485332_111485712
H1_mix_00019872	chr12	-	4380	26	FSM	ENSG00000204842.18	ENST00000643669.2	4380	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	51.2733849087419	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTTAGTGTGTGTCTGT	-16	True	NA	-7	True	AATAAA	-45	NA	111599315	111452213	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_111452841_111453676_111453846_111456028_111456257_111457213_111457360_111464661_111464716_111470107_111470241_111470557_111470743_111479069_111479103_111485264_111485332_111485712_111485866_111486760_111486825_111488475_111488781_111509548_111509620_111509890_111509999_111510384_111510583_111513356_111513540_111516153_111516364_111518248_111518428_111519878_111520077_111520881_111520974_111525191_111525317_111552279_111552431_111552905_111552978_111554157_111554218_111555882_111555920_111598783
H1_mix_00019874	chr12	-	4407	23	FSM	ENSG00000204842.18	ENST00000616825.4	4575	23	169	-1	-157	0	multi-exon	FALSE	canonical	0	0	junction_15	49.7789535333562	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTTAGTGTGTGTCTGT	44	True	NA	-7	True	AATAAA	-45	NA	111599507	111452213	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_111452841_111453676_111453846_111456028_111456257_111457213_111457360_111470107_111470241_111470557_111470743_111485270_111485332_111485712_111485866_111486760_111486825_111488475_111488781_111509548_111509620_111509890_111509999_111510384_111510583_111513356_111513540_111516153_111516364_111518248_111518428_111519878_111520077_111520881_111520974_111525191_111525317_111552279_111552431_111554157_111554218_111555882_111555920_111598783
H1_mix_00019875	chr12	-	4064	23	NIC	ENSG00000204842.18	novel	4341	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	42.9046607882567	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAATAAAAACTTAAAAA	-16	True	NA	-61	True	NA	NA	NA	111599315	111452267	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_111452841_111456028_111456257_111457213_111457360_111470107_111470241_111470557_111470743_111485270_111485332_111485712_111485866_111486760_111486825_111488475_111488781_111509548_111509620_111509890_111509999_111510384_111510583_111513356_111513540_111516153_111516364_111518248_111518428_111519878_111520077_111520881_111520974_111525191_111525317_111552279_111552431_111552905_111552978_111554157_111554218_111555882_111555920_111598783
H1_mix_00019879	chr12	-	3996	12	FSM	ENSG00000089234.16	ENST00000419234.9	3996	12	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_7	17.2387225083243	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCCCCGTGTGAAATGT	7	True	NA	-14	True	ATTAAA	-21	NA	111685956	111642145	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_111644563_111649938_111650043_111655565_111655656_111658735_111658846_111659206_111659346_111660599_111660676_111665638_111665788_111672660_111672775_111679150_111679341_111681636_111681836_111683145_111683308_111685710
H1_mix_00019881	chr12	-	927	2	FSM	ENSG00000234608.9	ENST00000443596.2	986	2	53	6	-5	-2	multi-exon	FALSE	canonical	3	22	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTACTTTGAGTCTTTTG	59	False	NA	-11	True	AATAAA	-20	NA	111841902	111839769	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_111840478_111841683
H1_mix_00019882	chr12	-	660	3	FSM	ENSG00000234608.9	ENST00000442119.7	686	3	19	7	-7	-2	multi-exon	FALSE	canonical	3	22	junction_2	28	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTACTTTGAGTCTTTTG	-3	True	NA	-11	True	AATAAA	-20	NA	111841964	111839769	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_111840004_111840332_111840478_111841683
H1_mix_00019883	chr12	-	2284	2	FSM	ENSG00000234608.9	ENST00000428207.4	2290	2	0	6	0	-2	multi-exon	FALSE	canonical	3	179	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTACTTTGAGTCTTTTG	NA	False	NA	-11	True	AATAAA	-20	NA	111842902	111839769	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_111840478_111841326
H1_mix_00019884	chr12	-	1955	3	FSM	ENSG00000234608.9	ENST00000456429.6	1961	3	0	6	0	-2	multi-exon	FALSE	canonical	3	78	junction_1	50.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTACTTTGAGTCTTTTG	NA	False	NA	-11	True	AATAAA	-20	NA	111842902	111839769	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_111840004_111840332_111840478_111841326
H1_mix_00019885	chr12	-	1796	2	FSM	ENSG00000234608.9	ENST00000656209.1	1785	2	0	-11	0	0	multi-exon	FALSE	canonical	3	78	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACTTACTTTGAGTCTT	-2	True	NA	-14	True	AATAAA	-17	NA	111841897	111839772	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_111840004_111840332
H1_mix_00019886	chr12	-	1758	4	FSM	ENSG00000234608.9	ENST00000590479.6	772	4	-991	5	-19	0	multi-exon	FALSE	canonical	3	32	junction_3	61.3967063901278	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACTTACTTTGAGTCTT	NA	False	NA	-14	True	AATAAA	-17	NA	111842921	111839772	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_111840004_111840332_111840478_111841326_111841471_111841683
H1_mix_00019887	chr12	-	808	2	FSM	ENSG00000234608.9	ENST00000692189.1	877	2	56	13	-4	2	multi-exon	FALSE	canonical	3	81	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTACTTTGAGTCTTTT	60	False	NA	-12	True	AATAAA	-19	NA	111841901	111839770	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_111840004_111841326
H1_mix_00019888	chr12	-	1419	10	FSM	ENSG00000198270.13	ENST00000355445.7	1403	10	0	-16	0	0	multi-exon	TRUE	canonical	2	6	junction_6	14.4179243724565	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCTACTCCATGGTTGC	9	True	NA	3	True	AATAAA	-34	NA	112013139	111931281	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_111931828_111932585_111932660_111933885_111934031_111936691_111936831_111937159_111937244_111938160_111938211_111991757_111991890_112003799_112003864_112005256_112005304_112013001
H1_mix_00019889	chr12	-	1538	11	FSM	ENSG00000198270.13	ENST00000552374.7	1534	11	12	-16	-1	0	multi-exon	FALSE	canonical	3	23	junction_8	9.61301201497221	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCTACTCCATGGTTGC	-5	True	NA	3	True	AATAAA	-34	NA	112013153	111931281	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_111931828_111932585_111932660_111933885_111934031_111936691_111936831_111937159_111937244_111938160_111938211_111943264_111943370_111991757_111991890_112003799_112003864_112005256_112005304_112013001
H1_mix_00019890	chr12	-	1229	9	FSM	ENSG00000198270.13	ENST00000549537.6	1229	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	14.2038727113418	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTGTTACCTTGATGGATA	13	True	NA	-85	True	NA	NA	NA	112013135	111931369	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_111931828_111932585_111932660_111933885_111934031_111937159_111937244_111938160_111938211_111943264_111943370_111991757_111991890_112005256_112005304_112013001
H1_mix_00019891	chr12	-	2761	1	FSM	ENSG00000198270.13	ENST00000437003.3	2761	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTCATTGTCCACGTACC	0	True	NA	-6	True	AATAAA	-21	NA	112013185	112010424	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_112010400_112013200
H1_mix_00019898	chr12	-	2147	15	FSM	ENSG00000173064.14	ENST00000311694.7	2734	15	0	587	0	-587	multi-exon	FALSE	canonical	3	11	junction_4	3.39041265323023	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTTGCTGTGTAGTGTT	NA	False	NA	NA	False	TATAAA	-1	NA	112273793	112250143	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_112250378_112250970_112251135_112252423_112252529_112254042_112254163_112256319_112256519_112258495_112258597_112259111_112259266_112261304_112261430_112264083_112264213_112265174_112265296_112265877_112265984_112266911_112266983_112269703_112269850_112270226_112270460_112273654
H1_mix_00019899	chr12	-	913	2	FSM	ENSG00000089009.16	ENST00000553205.1	899	2	0	-14	0	13	multi-exon	FALSE	canonical	3	10277	junction_1	0	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAATTTTTGGTTTTTAA	3257	False	NA	-4	True	ATTAAA	-27	NA	112406344	112405175	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_112406038_112406293
H1_mix_00019900	chr12	-	1088	7	FSM	ENSG00000089009.16	ENST00000424576.6	1074	7	0	-14	0	0	multi-exon	FALSE	canonical	3	1596	junction_6	3326.90291412298	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTCTCTTTTTTTAAT	5	True	NA	-17	True	ATTAAA	-14	NA	112409596	112405188	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_112405377_112405852_112406038_112406293_112406343_112406746_112406891_112408239_112408339_112408419_112408657_112409410
H1_mix_00019901	chr12	-	934	7	FSM	ENSG00000089009.16	ENST00000202773.14	921	7	0	-13	0	13	multi-exon	FALSE	canonical	3	6502	junction_6	1562.22177967435	2961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAATTTTTGGTTTTTAA	-4	True	NA	-4	True	ATTAAA	-27	NA	112409605	112405175	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_112405377_112405852_112406038_112406293_112406343_112406746_112406891_112408239_112408339_112408419_112408657_112409586
H1_mix_00019909	chr12	-	4400	21	NNC	ENSG00000123064.13	novel	4377	20	NA	NA	0	16381	intron_retention	FALSE	non_canonical	0	0	junction_1	129.140388724829	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATGCTATTTTGTGTAA	-7	True	NA	NA	False	NA	NA	NA	113185478	113140791	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_113140817_113157174_113159110_113161269_113161383_113161892_113161998_113162931_113163046_113163131_113163275_113164066_113164286_113165643_113165718_113165801_113166033_113169769_113169905_113172352_113172564_113174639_113174772_113174874_113174937_113175035_113175158_113176839_113176936_113177051_113177094_113178976_113179027_113179142_113179332_113179934_113180006_113180928_113181059_113185277
H1_mix_00019911	chr12	-	4377	20	FSM	ENSG00000123064.13	ENST00000306014.10	4377	20	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_1	75.2200833675971	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTGAGGGTGAACTTAC	-7	True	NA	-1	True	AATAAA	-26	NA	113185478	113157172	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_113159110_113161269_113161383_113161892_113161998_113162931_113163046_113163131_113163275_113164066_113164286_113165643_113165718_113165801_113166033_113169769_113169905_113172352_113172564_113174639_113174772_113174874_113174937_113175035_113175158_113176839_113176936_113177051_113177094_113178976_113179027_113179142_113179332_113179934_113180006_113180928_113181059_113185277
H1_mix_00019916	chr12	-	2645	5	FSM	ENSG00000166578.10	ENST00000416617.3	1670	5	58	-1033	-9	1028	multi-exon	FALSE	canonical	3	6	junction_3	3.34477204006491	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCAGCAGCAGCAGCCCC	7	True	NA	NA	False	NA	NA	NA	113221036	113194412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_113195890_113197540_113197613_113200579_113200814_113207437_113208260_113220996
H1_mix_00019917	chr12	-	1513	4	FSM	ENSG00000089060.12	ENST00000550047.5	2493	4	999	-19	999	-3	multi-exon	FALSE	canonical	3	56	junction_3	9.80929264637478	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGACACCCCCAACTTTT	NA	False	NA	-7	True	AATAAA	-29	NA	113307844	113298761	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_113299975_113304320_113304386_113306494_113306576_113307690
H1_mix_00019918	chr12	-	3678	15	NIC	ENSG00000089060.12	novel	3510	16	NA	NA	0	1	intron_retention	FALSE	canonical	3	46	junction_10	11.6752398043807	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAAATGACACCCCCAAC	14	True	NA	-11	True	AATAAA	-25	NA	113335109	113298765	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_113299975_113304320_113304386_113306494_113306576_113307690_113307845_113310233_113310356_113315334_113315477_113316525_113316657_113316941_113317002_113318963_113319072_113320330_113320499_113320580_113320908_113321055_113321109_113321195_113321349_113332722_113332961_113334442
H1_mix_00019925	chr12	-	1265	2	FSM	ENSG00000122965.11	ENST00000553232.1	1265	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGCATAATAATAATTTAT	2063	False	NA	NA	False	AATAAA	-15	NA	113818179	113816737	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_113817926_113818102
H1_mix_00019926	chr12	-	2159	1	Genic_Genomic	ENSG00000122965.11	novel	NA	NA	NA	NA	-719	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTGCATAATAATAATTT	1344	False	NA	NA	False	AATAAA	-13	NA	113818898	113816739	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr12_-_113816700_113818900
H1_mix_00019927	chr12	-	3574	25	FSM	ENSG00000122965.11	ENST00000392561.7	3574	25	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	60.9876894454028	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTTTTCTTCTTCATT	20	False	NA	-1	True	AGTAAA	-25	NA	113966310	113822053	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_113822647_113823208_113823322_113844667_113844789_113858790_113858897_113914968_113915086_113918391_113918448_113920610_113920691_113924696_113924758_113927053_113927230_113937006_113937137_113939959_113940161_113942323_113942435_113945827_113945925_113946353_113946476_113947333_113947465_113948832_113949037_113950082_113950155_113952511_113952591_113955130_113955212_113957781_113958051_113959211_113959405_113959864_113959904_113960058_113960179_113962231_113962415_113966191
H1_mix_00019928	chr12	-	4148	24	FSM	ENSG00000122965.11	ENST00000261741.10	4148	24	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_11	27.0585726084508	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTTTGTTTTCTTCTTC	5	True	NA	-4	True	AGTAAA	-22	NA	113966325	113822056	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_113823322_113844667_113844789_113858790_113858897_113914968_113915086_113918391_113918448_113920610_113920691_113924696_113924758_113927053_113927230_113937006_113937137_113939959_113940161_113942323_113942435_113945827_113945925_113946353_113946476_113947333_113947465_113948832_113949037_113950082_113950155_113952511_113952591_113955130_113955212_113957781_113958051_113959211_113959405_113959864_113959904_113960058_113960179_113962231_113962415_113966191
H1_mix_00019929	chr12	-	4918	8	FSM	ENSG00000135111.16	ENST00000257566.7	4208	8	-711	1	-126	-1	multi-exon	FALSE	canonical	3	30	junction_5	30.6640785657374	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGGCCTTGTGTTAAAT	1604	False	NA	-8	True	AATAAA	-16	NA	114684301	114670255	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_114672303_114674164_114674836_114676312_114676471_114677579_114677657_114679504_114679652_114679912_114679973_114680878_114681147_114682811
H1_mix_00019930	chr12	-	4733	7	FSM	ENSG00000135111.16	ENST00000349155.7	4733	7	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_5	17.1504778035158	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGCCTTGTGTTAAATG	-6	True	NA	-7	True	AATAAA	-17	NA	114684175	114670254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_114672303_114674164_114674836_114676312_114676471_114677579_114677657_114679504_114679652_114680878_114681147_114682811
H1_mix_00019932	chr12	-	9883	31	FSM	ENSG00000123066.9	ENST00000281928.9	9885	31	4	-2	4	2	multi-exon	FALSE	canonical	3	18	junction_23	9.21647076343941	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGGCTTTTTTCCCT	9	True	NA	1	True	AATAAA	-19	NA	116277689	115958573	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_115961399_115963406_115963520_115966081_115966244_115968939_115969098_115970593_115970771_115972077_115972237_115975170_115975314_115975514_115975739_115980749_115980939_115982383_115982604_115983116_115983541_115984179_115984373_115986265_115986490_115987108_115987289_115991019_115991958_115996475_115996682_115997009_115997231_116003002_116003103_116005868_116005994_116006305_116006412_116007410_116007637_116008400_116009133_116012796_116012902_116015108_116015275_116019223_116019413_116019777_116019973_116022455_116022602_116096668_116096753_116111427_116111513_116237467_116237706_116277059
H1_mix_00019934	chr12	-	460	3	FSM	ENSG00000123066.9	ENST00000650091.1	2528	3	2068	0	-1071	0	multi-exon	FALSE	canonical	3	26	junction_2	13	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTGATAGCAGCCTATTG	NA	False	NA	NA	False	NA	NA	NA	115986511	115983519	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_115983541_115984179_115984373_115986265
H1_mix_00019935	chr12	-	387	1	FSM	ENSG00000123066.9	ENST00000549755.1	2339	1	2228	-276	527	276	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCATACTTGTGCTCATA	724	False	NA	NA	False	NA	NA	NA	116006917	116006530	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_116006500_116006900
H1_mix_00019936	chr12	-	8404	5	FSM	ENSG00000111412.6	ENST00000261318.5	8426	5	0	22	0	-22	multi-exon	FALSE	canonical	3	221	junction_3	33.4019086281009	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCCATATTATTTTAAAAT	-21	True	NA	NA	False	AATAAA	-14	NA	116738069	116710192	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_116717894_116719762_116719877_116720295_116720448_116723066_116723224_116737789
H1_mix_00019937	chr12	-	7031	6	NNC	ENSG00000111412.6	novel	8426	5	NA	NA	0	-751	at_least_one_novel_splicesite	TRUE	non_canonical	1	4	junction_1	112.345182362218	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGCTTTGGTTTCCTCA	-21	True	NA	NA	False	AGTAAA	-8	NA	116738069	116710921	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_116711289_116711932_116717894_116719762_116719877_116720295_116720448_116723066_116723224_116737789
H1_mix_00019938	chr12	-	7338	4	FSM	ENSG00000111412.6	ENST00000547630.1	1371	4	1	-5968	0	-931	multi-exon	FALSE	canonical	3	26	junction_3	129.535923803227	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTAATTTGAATAGTAAATG	-21	True	NA	NA	False	AATAAA	-17	NA	116738069	116711101	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_116717894_116719762_116719877_116720295_116720448_116737789
H1_mix_00019939	chr12	-	694	2	FSM	ENSG00000111412.6	ENST00000548356.1	923	2	229	0	229	0	multi-exon	FALSE	canonical	3	312	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTGTTGTTCTGTGT	NA	False	NA	-87	True	NA	NA	NA	116719898	116717335	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_116717894_116719762
H1_mix_00019941	chr12	-	5793	2	FSM	ENSG00000135116.9	ENST00000257572.5	5789	2	0	-4	0	4	multi-exon	FALSE	canonical	3	28	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACATTTGTGTTTTCATT	-2	True	NA	1	True	ATTAAA	-25	NA	116881441	116856139	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_116861467_116880975
H1_mix_00019942	chr12	-	989	8	FSM	ENSG00000088992.18	ENST00000335209.12	989	8	0	0	0	0	multi-exon	TRUE	canonical	3	92	junction_3	14.7979590429469	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCTCTGTCAGTTCCT	-2	True	NA	2	True	AATAAA	-26	NA	117099416	117038922	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_117039211_117041946_117041995_117046558_117046667_117046776_117046839_117049018_117049159_117056805_117056887_117075270_117075341_117099224
H1_mix_00019943	chr12	-	938	7	FSM	ENSG00000088992.18	ENST00000541210.5	936	7	0	-2	0	0	multi-exon	FALSE	canonical	3	11	junction_5	42.7034346784112	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCTCTGTCAGTTCCT	-1	True	NA	2	True	AATAAA	-26	NA	117099446	117038922	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_117039211_117041946_117041995_117046558_117046667_117046776_117046839_117049018_117049159_117075270_117075341_117099224
H1_mix_00019944	chr12	-	1057	8	FSM	ENSG00000088992.18	ENST00000470612.5	1057	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	35.4711725438088	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCTCTGTCAGTTCCT	NA	False	NA	2	True	AATAAA	-26	NA	117099479	117038922	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_117039211_117041946_117041995_117046558_117046667_117046771_117046839_117049018_117049159_117056805_117056887_117075270_117075341_117099224
H1_mix_00019947	chr12	-	5976	12	FSM	ENSG00000135108.16	ENST00000622495.5	5976	12	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_3	61.7641475077198	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGGCTCAAACACCATAG	5	True	NA	-16	True	AATAAA	-17	NA	117190470	117141990	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_117146278_117155790_117155949_117157872_117158064_117165484_117165618_117166897_117167078_117172470_117172608_117174204_117174342_117174650_117174798_117177519_117177642_117186476_117186572_117189226_117189363_117190217
H1_mix_00019949	chr12	-	10687	1	Genic_Genomic	ENSG00000171435.14	novel	NA	NA	NA	NA	91694	163	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAGGCTCCTCTTTAGGC	NA	False	NA	NA	False	NA	NA	NA	117463535	117452848	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr12_-_117452800_117463500
H1_mix_00019953	chr12	-	2839	4	FSM	ENSG00000176871.9	ENST00000536602.5	1008	4	23	-1854	0	1854	multi-exon	FALSE	canonical	3	381	junction_1	43.2049379893857	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTAGAGACGGGGTTTT	-1	True	NA	NA	False	NA	NA	NA	118061089	118040601	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_118042973_118043132_118043378_118052309_118052479_118061035
H1_mix_00019954	chr12	-	1966	3	NNC	ENSG00000176834.14	novel	5009	9	NA	NA	7502	7985	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATAATGTAGAGGAAGTGA	NA	False	NA	NA	False	NA	NA	NA	118066239	118055607	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_118055633_118063592_118064834_118065539
H1_mix_00019956	chr12	-	5009	9	FSM	ENSG00000176834.14	ENST00000359236.10	5009	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	10.1087833095779	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTTTGTGATCTTGATT	9	True	NA	-21	True	AATAAA	-16	NA	118104011	118063592	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_118066695_118068376_118068598_118071051_118071068_118071358_118071470_118073698_118073993_118079345_118079607_118082126_118082430_118095532_118095815_118103592
H1_mix_00019959	chr12	-	1962	2	FSM	ENSG00000176834.14	ENST00000542195.1	730	2	0	-1232	0	-2	multi-exon	FALSE	canonical	3	56	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCCTACTCTGTAAATAA	647	False	NA	-7	True	AATAAA	-16	NA	118103990	118101606	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_118103171_118103592
H1_mix_00019960	chr12	-	822	1	FSM	ENSG00000176834.14	ENST00000621133.1	418	1	-419	15	-419	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCTTGACTAAATTCCA	NA	False	NA	NA	False	CATAAA	-2	NA	118117882	118117060	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_118117100_118117900
H1_mix_00019962	chr12	-	480	3	FSM	ENSG00000255618.2	ENST00000668907.1	530	3	50	0	50	0	multi-exon	FALSE	canonical	3	9	junction_1	2	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGTGTGATGTGATTCT	NA	False	NA	0	True	AATAAA	-22	NA	118774528	118773030	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_118773303_118773610_118773776_118774485
H1_mix_00019963	chr12	-	7567	39	FSM	ENSG00000122966.17	ENST00000676849.1	7592	39	39	-14	8	2	multi-exon	FALSE	canonical	3	35	junction_18	19.3956473399078	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTTTAGTGCAATGACC	1037	False	NA	-2	True	AATAAA	-20	NA	119803459	119685788	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_119688256_119690150_119690455_119697658_119697839_119697975_119698055_119700744_119700826_119701623_119701753_119701849_119701959_119704362_119704456_119708178_119708319_119710250_119710387_119710539_119710621_119712177_119712348_119712590_119712696_119713202_119713295_119713467_119713649_119714196_119714335_119718244_119718410_119718698_119718817_119720477_119720586_119721308_119721450_119728501_119728607_119730494_119730631_119734163_119734358_119735159_119735358_119742410_119742465_119752049_119752248_119757370_119757546_119758590_119758701_119760938_119761056_119767086_119767183_119770784_119770911_119772769_119772911_119775785_119775840_119776357_119776409_119776671_119776843_119782517_119782638_119783907_119784052_119784959_119785066_119803205
H1_mix_00019964	chr12	-	8741	48	NIC	ENSG00000122966.17	novel	8736	48	NA	NA	13	66	combination_of_known_junctions	TRUE	canonical	3	35	junction_18	18.848133867687	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGTGTAGGTGTATTAT	13	True	NA	62	True	AAGAAA	-15	NA	119877307	119685724	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_119688256_119690150_119690452_119697658_119697839_119697975_119698055_119700744_119700826_119701623_119701753_119701849_119701959_119704362_119704456_119708178_119708319_119710250_119710387_119710539_119710621_119712177_119712348_119712590_119712696_119713202_119713295_119713467_119713649_119714196_119714335_119718244_119718410_119718698_119718817_119720477_119720586_119721308_119721450_119728501_119728607_119730494_119730631_119734163_119734358_119735159_119735358_119742410_119742465_119752049_119752248_119757370_119757546_119758590_119758701_119760938_119761056_119767086_119767183_119770784_119770911_119772769_119772911_119775785_119775840_119776357_119776409_119776671_119776843_119782517_119782638_119783907_119784052_119784959_119785066_119803205_119803390_119822819_119822974_119825164_119825369_119832770_119832865_119834085_119834229_119850173_119850276_119857522_119857699_119869059_119869202_119876072_119876182_119877248
H1_mix_00019969	chr12	-	2859	6	FSM	ENSG00000111737.12	ENST00000229340.10	2855	6	0	-4	0	4	multi-exon	FALSE	canonical	3	121	junction_2	1.74355957741627	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCAGGGTCTGTTTGCTC	2	True	NA	-5	True	AATAAA	-21	NA	120116753	120095094	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120097374_120098810_120098936_120099029_120099155_120103825_120103950_120108416_120108468_120116598
H1_mix_00019970	chr12	-	939	5	FSM	ENSG00000111737.12	ENST00000534951.5	939	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	50.9626088421698	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGATGCCAGCCTGCTG	-12	True	NA	NA	False	NA	NA	NA	120116767	120096903	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120097374_120099029_120099155_120103825_120103950_120108416_120108468_120116598
H1_mix_00019971	chr12	-	8681	58	FSM	ENSG00000089154.11	ENST00000300648.7	8681	58	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_43	100.435343546495	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGTACCTGTTTTTGTA	1	True	NA	16	True	ATTAAA	-32	NA	120194715	120127201	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120127975_120129275_120129495_120130645_120130754_120131184_120131334_120131925_120132023_120134290_120134406_120134532_120134727_120136501_120136733_120137205_120137320_120137544_120137815_120137900_120138045_120138322_120138416_120138694_120138857_120140858_120141024_120142506_120142723_120142823_120142942_120144305_120144449_120144638_120144836_120144922_120145062_120145261_120145331_120147051_120147273_120148166_120148347_120149605_120149721_120149921_120150044_120151144_120151392_120153212_120153408_120153743_120153910_120154969_120155041_120155240_120155431_120155591_120155720_120156460_120156605_120156911_120156993_120157848_120158031_120158459_120158616_120159824_120160024_120160141_120160256_120161489_120161584_120161879_120162059_120162846_120162972_120163069_120163260_120164335_120164496_120164645_120164722_120168207_120168301_120170168_120170322_120173652_120173827_120174070_120174170_120175161_120175213_120175745_120175875_120176142_120176218_120177446_120177556_120177683_120177753_120178624_120178760_120178851_120178951_120183568_120183678_120184111_120184244_120184823_120184888_120190297_120190401_120194679
H1_mix_00019972	chr12	-	595	4	FSM	ENSG00000089154.11	ENST00000547369.5	595	4	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_2	22.8083805260747	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGAGGAGGAGGAGGAG	NA	False	NA	NA	False	NA	NA	NA	120160303	120157952	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120158031_120158459_120158616_120159824_120160024_120160141
H1_mix_00019974	chr12	-	1344	7	FSM	ENSG00000089157.16	ENST00000551150.5	1344	7	0	0	0	0	multi-exon	FALSE	canonical	3	19833	junction_5	712.395411426984	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGACTCTTAATTTTGTA	8	False	NA	-13	True	AATAAA	-22	NA	120201099	120196698	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120196935_120197321_120197463_120198553_120198740_120198853_120199001_120199117_120199206_120199309_120199486_120200729
H1_mix_00019976	chr12	-	720	2	FSM	ENSG00000089157.16	ENST00000552292.5	720	2	0	0	0	0	multi-exon	FALSE	canonical	3	21502	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGGACTCTTAATTTT	3299	False	NA	-16	True	AATAAA	-19	NA	120197808	120196701	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120196935_120197321
H1_mix_00019977	chr12	-	912	7	FSM	ENSG00000089157.16	ENST00000313104.9	912	7	0	0	0	0	multi-exon	FALSE	canonical	3	680	junction_2	7657.29831961349	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGGACTCTTAATTTT	0	True	NA	-16	True	AATAAA	-19	NA	120201107	120196701	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120196935_120197321_120197463_120198853_120199001_120199117_120199206_120199309_120199486_120200729_120200832_120201082
H1_mix_00019978	chr12	-	993	8	FSM	ENSG00000089157.16	ENST00000546989.5	993	8	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_3	7495.46111636494	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGGACTCTTAATTTT	-3	True	NA	-16	True	AATAAA	-19	NA	120201110	120196701	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120196935_120197321_120197463_120198553_120198632_120198853_120199001_120199117_120199206_120199309_120199486_120200729_120200832_120201082
H1_mix_00019979	chr12	-	2594	6	FSM	ENSG00000089157.16	ENST00000552461.5	2591	6	0	-3	0	-2	multi-exon	FALSE	canonical	3	19833	junction_5	648.106596170722	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTCTGGACTCTTAATT	-3	True	NA	-18	True	AATAAA	-17	NA	120201110	120196703	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120196935_120197321_120197463_120198553_120198740_120198853_120199001_120199117_120199206_120199309
H1_mix_00019980	chr12	-	1260	8	FSM	ENSG00000089157.16	ENST00000228306.8	1257	8	0	-3	0	-2	multi-exon	FALSE	canonical	3	1244	junction_7	6898.106196779	1083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTCTGGACTCTTAATT	NA	False	NA	-18	True	AATAAA	-17	NA	120201211	120196703	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120196935_120197321_120197463_120198553_120198740_120198853_120199001_120199117_120199206_120199309_120199486_120200729_120200892_120201082
H1_mix_00019981	chr12	-	1106	8	FSM	ENSG00000089157.16	ENST00000549098.5	1106	8	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_6	7355.81593859233	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAGTCTCTGGACTCTT	-3	True	NA	-22	True	AATAAA	-13	NA	120201110	120196707	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120196935_120197321_120197463_120198553_120198740_120198853_120199001_120199117_120199206_120199309_120199486_120200718_120200832_120201082
H1_mix_00019982	chr12	-	966	8	FSM	ENSG00000089157.16	ENST00000551258.5	966	8	0	0	0	0	multi-exon	FALSE	canonical	3	1338	junction_3	7112.68046433657	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGTCGGACGAGGATATG	10	False	NA	-128	True	NA	NA	NA	120201097	120196813	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120196935_120197321_120197463_120198553_120198771_120198894_120199001_120199117_120199206_120199309_120199486_120200729_120200832_120201082
H1_mix_00019987	chr12	-	1159	3	FSM	ENSG00000089157.16	ENST00000548568.5	1127	3	-32	0	0	0	multi-exon	FALSE	canonical	3	19833	junction_1	960.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGTGCAGTGGCACAAT	243	False	NA	NA	False	NA	NA	NA	120200864	120198357	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120199206_120199309_120199486_120200729
H1_mix_00019990	chr12	-	880	4	FSM	ENSG00000089157.16	ENST00000552902.5	869	4	0	-11	0	0	multi-exon	FALSE	canonical	3	19833	junction_2	784.578159834244	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGAGTGATGTGCAGCTG	18	False	NA	NA	False	NA	NA	NA	120201089	120198744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120199001_120199117_120199206_120199309_120199486_120200729
H1_mix_00019996	chr12	-	3787	12	FSM	ENSG00000089159.17	ENST00000228307.11	3785	12	0	-2	0	2	multi-exon	FALSE	canonical	3	121	junction_5	230.274575594635	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTAGTGCTATTTCTTG	NA	False	NA	-12	True	AATAAA	-21	NA	120265771	120210444	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120212581_120213841_120213991_120214135_120214218_120214824_120214999_120215102_120215274_120215559_120215662_120221622_120221759_120222548_120222751_120222862_120223000_120223717_120223834_120224150_120224378_120265616
H1_mix_00019997	chr12	-	3685	11	FSM	ENSG00000089159.17	ENST00000424649.6	3683	11	0	-2	0	2	multi-exon	FALSE	canonical	3	447	junction_5	88.5630284035048	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTAGTGCTATTTCTTG	NA	False	NA	-12	True	AATAAA	-21	NA	120265771	120210444	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120212581_120213841_120213991_120214135_120214218_120214824_120214999_120215102_120215274_120221622_120221759_120222548_120222751_120222862_120223000_120223717_120223834_120224150_120224378_120265616
H1_mix_00019998	chr12	-	3839	11	FSM	ENSG00000089159.17	ENST00000267257.11	3835	11	0	-4	0	4	multi-exon	TRUE	canonical	3	36	junction_5	207.157041878861	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTCTTGGTGGTCTGAA	NA	False	NA	-2	True	AATAAA	-31	NA	120265771	120210434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120212581_120213841_120213991_120214135_120214218_120214824_120214999_120215102_120215418_120221622_120221759_120222548_120222751_120222862_120223000_120223717_120223834_120224150_120224378_120265616
H1_mix_00020000	chr12	-	3236	12	NIC	ENSG00000089159.17	novel	4112	12	NA	NA	0	698	combination_of_known_junctions	FALSE	canonical	3	61	junction_10	242.225084860213	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTGATAGATTTCTAC	-5	True	NA	-36	True	NA	NA	NA	120265737	120211615	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_120212581_120213841_120213991_120214135_120214218_120214824_120214999_120215102_120215274_120221622_120221759_120222548_120222751_120222862_120223000_120223717_120223834_120224150_120224378_120226361_120227118_120265616
H1_mix_00020007	chr12	-	3045	16	NNC	ENSG00000135097.7	novel	2959	15	NA	NA	-58	61702	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	45.5143445031954	366	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTGCAGTTAAGACCCCT	1001	False	NA	NA	False	NA	NA	NA	120369222	120279627	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_120279657_120341330_120343106_120345569_120345633_120346134_120346323_120347445_120347515_120351343_120351401_120353298_120353380_120356901_120357020_120357815_120357899_120359004_120359054_120363042_120363136_120364713_120364756_120368007_120368093_120368191_120368274_120368832_120368874_120369032
H1_mix_00020012	chr12	-	1453	2	FSM	ENSG00000170855.4	ENST00000302432.3	1153	2	-41	-259	-27	15	multi-exon	FALSE	canonical	3	10	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAGTGCATTTTATGGAA	-18	True	NA	-1	True	AATAAA	-38	NA	120446411	120443948	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120444956_120445965
H1_mix_00020013	chr12	-	3719	1	FSM	ENSG00000111786.9	ENST00000548326.1	1704	1	-353	-1662	-353	1641	mono-exon	FALSE	NA	NA	NA	NA	NA	2020	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCACAGTAAAAAAATACTG	5957	False	NA	NA	False	AAAAAG	-15	NA	120463749	120460030	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120460000_120463700
H1_mix_00020014	chr12	-	1152	4	FSM	ENSG00000111786.9	ENST00000229390.8	1152	4	0	0	0	0	multi-exon	FALSE	canonical	3	3982	junction_2	243.798186120315	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACATGTGTGGTTGTCCT	-42	True	NA	-5	True	AATATA	-18	NA	120469748	120461671	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120462163_120463949_120464123_120465626_120465788_120469421
H1_mix_00020017	chr12	-	4131	2	FSM	ENSG00000248008.4	ENST00000669580.1	4142	2	11	0	11	0	multi-exon	FALSE	canonical	3	59	junction_1	0	421	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAGAGAAATAAGTTTTT	-14	True	NA	NA	False	ATTAAA	-18	NA	120495921	120488078	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120492111_120495822
H1_mix_00020018	chr12	-	1506	7	FSM	ENSG00000110871.15	ENST00000288532.11	1506	7	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_3	17.4451521441727	1603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTACTTGTCATTTTTTCT	1	True	NA	-4	True	AGTAAA	-17	NA	120529158	120503278	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120503886_120503969_120504082_120504894_120504984_120510016_120510124_120516566_120516789_120522213_120522364_120528939
H1_mix_00020020	chr12	-	913	4	FSM	ENSG00000167272.11	ENST00000341039.6	913	4	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_2	327.051813767924	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTAGTAGAGACGGGG	6	True	NA	NA	False	NA	NA	NA	120581379	120578763	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120579413_120579513_120579598_120581114_120581258_120581342
H1_mix_00020021	chr12	-	1075	5	FSM	ENSG00000167272.11	ENST00000357500.5	1086	5	11	0	7	0	multi-exon	FALSE	canonical	3	595	junction_4	151.819588657064	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTAGTAGAGACGGGG	-6	True	NA	NA	False	NA	NA	NA	120581391	120578763	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120579413_120579513_120579598_120579773_120579924_120581114_120581258_120581342
H1_mix_00020023	chr12	-	821	4	FSM	ENSG00000167272.11	ENST00000542776.5	821	4	0	0	0	0	multi-exon	FALSE	canonical	3	698	junction_3	130.099961568019	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTTAGCATACTTATATT	49	False	NA	-52	True	AATAAA	-18	NA	120581336	120579047	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120579413_120579513_120579598_120579773_120579924_120581114
H1_mix_00020024	chr12	-	1909	2	FSM	ENSG00000167272.11	ENST00000541834.1	653	2	-1256	0	0	0	multi-exon	FALSE	canonical	3	1007	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCATCTTCCACAGTTTT	134	False	NA	NA	False	NA	NA	NA	120581251	120579241	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120579413_120579513
H1_mix_00020026	chr12	-	2134	2	FSM	ENSG00000256008.3	ENST00000667391.1	2134	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTGTAAATAGCCCATT	NA	False	NA	NA	False	NA	NA	NA	120640516	120628829	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120630497_120640049
H1_mix_00020027	chr12	-	1943	2	FSM	ENSG00000256008.3	ENST00000540369.2	1015	2	-121	-807	-121	26	multi-exon	FALSE	canonical	2	3	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTCTTCTAATGATCTAA	NA	False	NA	NA	False	NA	NA	NA	120641712	120628803	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120630497_120641462
H1_mix_00020028	chr12	-	4135	11	FSM	ENSG00000157837.16	ENST00000353487.7	4135	11	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_4	20.8300264042079	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTTTGTCATTCTCACT	-7	True	NA	-1	True	ATTAAA	-21	NA	120904358	120762509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120765071_120766262_120766373_120767393_120767594_120768324_120768489_120768952_120769060_120782654_120782768_120783673_120783753_120784473_120784594_120791468_120791558_120810808_120810887_120903844
H1_mix_00020029	chr12	-	1743	1	FSM	ENSG00000241388.5	ENST00000539163.1	2455	1	704	8	704	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCCGTCTCAAAAAAAAAAAA	9377	False	NA	NA	False	NA	NA	NA	120971588	120969845	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120969800_120971600
H1_mix_00020030	chr12	-	4470	6	FSM	ENSG00000157895.11	ENST00000288757.7	4469	6	0	-1	0	1	multi-exon	FALSE	canonical	3	69	junction_1	32.8548322168901	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGACTGATGGCAATGGTT	3	True	NA	-4	True	AATAAA	-28	NA	121016487	121000484	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_121004490_121005002_121005094_121006320_121006395_121010827_121010927_121011103_121011147_121016329
H1_mix_00020031	chr12	-	4457	6	NIC	ENSG00000157895.11	novel	1339	7	NA	NA	0	-8	combination_of_known_junctions	FALSE	canonical	3	90	junction_1	26.0046149750386	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGAACCCTGACTGATG	10	True	NA	-13	True	AATAAA	-19	NA	121016480	121000493	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_121004493_121005002_121005094_121006320_121006395_121010827_121010927_121011103_121011147_121016329
H1_mix_00020032	chr12	-	5069	16	FSM	ENSG00000110931.19	ENST00000337174.7	5304	16	256	-21	-238	-1	multi-exon	FALSE	canonical	3	12	junction_15	80.9879552087154	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTTTGTATTGGTGATTG	4	True	NA	-1	True	AATAAA	-38	NA	121297801	121237675	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_121240870_121245139_121245241_121248605_121248735_121249786_121249875_121249960_121250035_121252660_121252715_121253272_121253473_121255549_121255639_121255782_121255805_121260318_121260356_121263805_121263940_121268637_121268690_121269527_121269582_121270897_121270946_121274055_121274586_121297538
H1_mix_00020033	chr12	-	4931	15	FSM	ENSG00000110931.19	ENST00000538733.5	5175	15	268	-24	-226	2	multi-exon	FALSE	canonical	3	12	junction_14	111.3718720214	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTATTGGTGATTGTTT	16	True	NA	2	True	AATAAA	-41	NA	121297789	121237672	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_121240870_121245139_121245241_121249786_121249875_121249960_121250035_121252660_121252715_121253272_121253473_121255549_121255639_121255782_121255805_121260318_121260356_121263805_121263940_121268637_121268690_121269527_121269582_121270897_121270946_121274055_121274586_121297538
H1_mix_00020035	chr12	-	1141	2	FSM	ENSG00000089053.13	ENST00000422342.2	1141	2	0	0	0	0	multi-exon	FALSE	canonical	3	1124	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAGTGCAAGCATCTCAGA	NA	False	NA	88	True	AATAAA	-19	NA	121310394	121308244	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_121308692_121309700
H1_mix_00020036	chr12	-	2574	17	FSM	ENSG00000089053.13	ENST00000261819.8	2574	17	0	0	0	0	multi-exon	FALSE	canonical	3	654	junction_8	106.571700482586	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAGTGCAAGCATCTCAGA	3	True	NA	88	True	AATAAA	-19	NA	121352411	121308244	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_121308692_121309700_121309864_121318276_121318425_121318500_121318609_121319696_121319819_121320384_121320460_121327095_121327232_121328315_121328498_121330582_121330673_121331346_121331429_121335532_121335724_121337290_121337393_121342002_121342070_121345838_121346032_121346895_121347006_121347801_121347882_121352133
H1_mix_00020039	chr12	-	2400	17	FSM	ENSG00000089053.13	ENST00000541887.5	2400	17	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_8	182.965918530611	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTTATTTTGTTGCT	3	True	NA	-24	True	AATAAA	-15	NA	121352388	121308356	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_121308692_121309700_121309864_121318276_121318425_121318500_121318609_121319696_121319819_121320384_121320460_121327095_121327232_121328315_121328459_121330582_121330673_121331346_121331429_121335532_121335724_121337290_121337393_121342002_121342070_121345838_121346032_121346895_121347006_121347801_121347882_121352133
H1_mix_00020040	chr12	-	6924	22	NNC	ENSG00000089094.20	novel	5315	23	NA	NA	73	0	intron_retention	FALSE	canonical	0	0	junction_18	85.8843814912059	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTAATTTCTGATTCAT	2375	False	NA	-27	True	AGTAAA	-20	NA	121580386	121429095	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_121430470_121439856_121440076_121440815_121440978_121441069_121441234_121442156_121442837_121442991_121443031_121443679_121443794_121444011_121444273_121444449_121444537_121445274_121445419_121453119_121453345_121494578_121494666_121509566_121510040_121513275_121513403_121520984_121521101_121532805_121532960_121534496_121534591_121548876_121548984_121549459_121549639_121574546_121574594_121575780_121575860_121578394
H1_mix_00020041	chr12	-	5266	24	NIC	ENSG00000089094.20	novel	5224	23	NA	NA	73	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	90.9095189885092	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTAATTTCTGATTCAT	2375	False	NA	-27	True	AGTAAA	-20	NA	121580386	121429095	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_121430164_121430341_121430470_121439856_121440076_121440815_121440978_121441069_121441234_121442156_121442837_121442991_121443031_121443679_121443794_121444011_121444273_121444449_121444537_121445274_121445419_121453119_121453345_121494578_121494666_121509566_121510040_121513275_121513403_121520984_121521101_121532805_121532960_121534496_121534591_121548876_121548984_121549459_121549639_121574546_121574594_121575780_121575860_121578801_121578947_121580019
H1_mix_00020043	chr12	-	5282	24	NNC	ENSG00000089094.20	novel	5315	23	NA	NA	-1740	0	intron_retention	FALSE	canonical	0	0	junction_18	100.355229174589	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTAATTTCTGATTCAT	-2	True	NA	-27	True	AGTAAA	-20	NA	121582763	121429095	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_121430470_121439856_121440076_121440815_121440978_121441069_121441234_121442156_121442837_121442991_121443031_121443679_121443794_121444011_121444273_121444449_121444537_121445274_121445419_121453119_121453345_121494578_121494666_121509566_121510040_121513275_121513403_121520984_121521101_121532805_121532960_121534496_121534591_121548876_121548984_121549459_121549639_121574546_121574594_121575780_121575860_121578801_121578947_121581023_121581135_121582669
H1_mix_00020044	chr12	-	3865	12	NIC	ENSG00000089094.20	novel	3170	14	NA	NA	3188	188	intron_retention	FALSE	canonical	3	68	junction_11	75.4972496899311	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACCACACAGAATTAATTC	-18	True	NA	NA	False	NA	NA	NA	121467365	121428907	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_121430470_121439856_121440076_121440815_121440978_121441069_121441234_121442156_121442837_121442991_121443031_121443679_121443794_121444011_121444273_121444449_121444537_121445274_121445419_121453119_121453345_121467157
H1_mix_00020045	chr12	-	7206	23	NIC	ENSG00000089094.20	novel	5315	23	NA	NA	159	1759	intron_retention	FALSE	canonical	0	0	junction_18	76.9683443570008	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAACTCCTGACCTCAGGTG	2780	False	NA	NA	False	NA	NA	NA	121579981	121427336	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_121430470_121439856_121440076_121440815_121440978_121441069_121441234_121442156_121442837_121442991_121443031_121443679_121443794_121444011_121444273_121444449_121444537_121445274_121445419_121453119_121453345_121494578_121494666_121509566_121510040_121513275_121513403_121520984_121521101_121532805_121532960_121534496_121534591_121548876_121548984_121549459_121549639_121574546_121574594_121575780_121575860_121578801_121578947_121579611
H1_mix_00020046	chr12	-	5017	25	NIC	ENSG00000089094.20	novel	5224	23	NA	NA	53	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	111.024365443907	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATGTAATTTCTGATTC	2674	False	NA	-29	True	AGTAAA	-18	NA	121580087	121429097	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_121430164_121430341_121430470_121439856_121440076_121440815_121440978_121441069_121441234_121442156_121442837_121442991_121443031_121443679_121443794_121444011_121444273_121444449_121444537_121445274_121445419_121453119_121453345_121494578_121494666_121509566_121510040_121513275_121513403_121516468_121516521_121520984_121521101_121532805_121532960_121534496_121534591_121548876_121548984_121549459_121549639_121574546_121574594_121575780_121575860_121578801_121578947_121580019
H1_mix_00020047	chr12	-	7327	23	NIC	ENSG00000089094.20	novel	5315	23	NA	NA	-51	1759	intron_retention	FALSE	canonical	0	0	junction_18	81.2333263247611	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAACTCCTGACCTCAGGTG	5	True	NA	NA	False	NA	NA	NA	121580510	121427336	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_121430470_121439856_121440076_121440815_121440978_121441069_121441234_121442156_121442837_121442991_121443031_121443679_121443794_121444011_121444273_121444449_121444537_121445274_121445419_121453119_121453345_121494578_121494666_121509566_121510040_121513275_121513403_121520984_121521101_121532805_121532960_121534496_121534591_121548876_121548984_121549459_121549639_121574546_121574594_121575780_121575860_121578801_121578947_121580019
H1_mix_00020053	chr12	-	1485	4	FSM	ENSG00000139725.8	ENST00000537171.5	1485	4	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	7.58653778449403	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTCCCCTTCACGGGCCA	9670	False	NA	NA	False	NA	NA	NA	121794262	121780486	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_121781007_121781082_121781193_121793151_121793240_121793495
H1_mix_00020055	chr12	-	4991	4	NIC	ENSG00000212694.8	novel	1024	5	NA	NA	5	-5	intron_retention	FALSE	canonical	3	32	junction_2	2.05480466765633	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAATGGATGAGTTGCTGT	9189	False	NA	-8	True	AATAAA	-14	NA	121802928	121795271	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_121799957_121801706_121801809_121802630_121802785_121802878
H1_mix_00020056	chr12	-	927	6	NIC	ENSG00000212694.8	novel	1521	7	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	7.52063827078527	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAATGGATGAGTTGCTGT	9185	False	NA	-8	True	AATAAA	-14	NA	121802932	121795271	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_121795727_121796190_121796243_121799846_121799957_121801706_121801809_121802630_121802785_121802878
H1_mix_00020057	chr12	-	946	5	NIC	ENSG00000212694.8	novel	1521	7	NA	NA	5	-76	intron_retention	FALSE	canonical	3	21	junction_1	8.38152730712011	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTCCCCTAAGACTGTGA	9189	False	NA	-79	True	AGTAAA	-31	NA	121802928	121795342	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_121795727_121796190_121796243_121799846_121799957_121801706_121801809_121802630
H1_mix_00020058	chr12	-	1593	4	FSM	ENSG00000184047.20	ENST00000474004.6	804	4	-219	-570	-219	0	multi-exon	FALSE	canonical	3	678	junction_1	55.1744707470966	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTAAGAGAAGGGGTGCAG	8582	False	NA	-27	True	NA	NA	NA	122218914	122207841	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122218265
H1_mix_00020061	chr12	-	2662	5	FSM	ENSG00000184047.20	ENST00000645569.1	2641	5	0	-21	0	0	multi-exon	FALSE	canonical	3	544	junction_4	92.0390542106991	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTTCCTTCCTTTCTT	12	True	NA	-18	True	NA	NA	NA	122226022	122207766	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122218265_122218398_122224511
H1_mix_00020062	chr12	-	1343	6	FSM	ENSG00000184047.20	ENST00000342392.3	1336	6	0	-7	0	0	multi-exon	FALSE	canonical	3	169	junction_4	275.314075194132	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTTCCTTCCTTTCTT	-18	True	NA	-18	True	NA	NA	NA	122226052	122207766	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122218265_122218398_122224644_122224749_122225964
H1_mix_00020064	chr12	-	1418	7	FSM	ENSG00000184047.20	ENST00000267169.11	1418	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	313.48546838552	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAACATCAACAGGACTTAA	-5	True	NA	21	True	NA	NA	NA	122226039	122207793	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_122208578_122209772_122209859_122216487_122216585_122216758_122216870_122218265_122218398_122224511_122224645_122225964
H1_mix_00020066	chr12	-	594	5	FSM	ENSG00000139719.11	ENST00000541169.1	594	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	194.540966122819	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGGACTGCAGAAGAAACG	NA	False	NA	NA	False	NA	NA	NA	122249970	122232818	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_122232969_122235785_122235924_122238586_122238725_122239877_122239946_122249870
H1_mix_00020067	chr12	-	5839	24	FSM	ENSG00000130779.22	ENST00000537178.5	5229	24	0	-610	0	-1	multi-exon	FALSE	canonical	3	60	junction_9	30.1445164408981	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTGTGGGTTTTGTTT	1049	False	122422670	-7	True	AATAAA	-14	NA	122422632	122271432	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_122273101_122274037_122274163_122278153_122278204_122278791_122278943_122279027_122279146_122288488_122288542_122309761_122309883_122316748_122316856_122319231_122319349_122327946_122328163_122328260_122328427_122332986_122333144_122334026_122334111_122334647_122334706_122336631_122336749_122340752_122341698_122352725_122352787_122354452_122354557_122355114_122355313_122360958_122361182_122363982_122364108_122377388_122377961_122380367_122380559_122422520
H1_mix_00020068	chr12	-	8115	25	NNC	ENSG00000130779.22	novel	5880	25	NA	NA	-368	-1	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_24	38.9447391611927	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTGTGGGTTTTGTTT	644	False	NA	-7	True	AATAAA	-14	NA	122423037	122271432	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_122273101_122274037_122274163_122278153_122278204_122278791_122278943_122279027_122279146_122288488_122288542_122309761_122309883_122316748_122316856_122319231_122319349_122322113_122324382_122327946_122328163_122328260_122328427_122332986_122333144_122334026_122334111_122334647_122334706_122336631_122336749_122340752_122341698_122352725_122352787_122354452_122354557_122355114_122355313_122360958_122361182_122363982_122364108_122377388_122377961_122380367_122380559_122422917
H1_mix_00020072	chr12	-	4173	14	FSM	ENSG00000033030.15	ENST00000672018.1	4255	14	82	0	-59	0	multi-exon	TRUE	non_canonical	3	70	junction_8	14.8539238336016	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACATAGTGTTTTTAACC	-20	True	NA	-3	True	AATAAA	-19	NA	122500991	122471598	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_122474276_122477840_122477959_122478205_122478293_122480189_122480312_122481521_122481665_122481944_122482088_122482634_122482696_122483278_122483345_122483459_122483564_122489385_122489464_122490461_122490568_122492714_122492790_122498826_122498868_122500639
H1_mix_00020076	chr12	-	3468	11	FSM	ENSG00000111011.18	ENST00000532695.5	2001	11	64	-1531	0	-74	multi-exon	FALSE	canonical	3	76	junction_7	238.828725240495	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGATGAGTGATACAGCC	18	True	NA	NA	False	NA	NA	NA	122526936	122503527	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_122505707_122506833_122506924_122508217_122508451_122511108_122511189_122515104_122515228_122517226_122517431_122518838_122519030_122520503_122520582_122521384_122521429_122522142_122522300_122526847
H1_mix_00020086	chr12	-	2721	4	FSM	ENSG00000139722.7	ENST00000267202.7	2706	4	0	-15	0	15	multi-exon	FALSE	canonical	3	239	junction_2	14.613540144522	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTTGGGGATGTGGATG	-20	True	NA	13	True	AATAAA	-33	NA	122896124	122865314	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_122867608_122868479_122868563_122870889_122871062_122895951
H1_mix_00020088	chr12	-	716	5	FSM	ENSG00000090975.14	ENST00000436074.6	1288	5	572	0	572	0	multi-exon	FALSE	canonical	2	3	junction_2	3.76662979332984	334	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTGTTCGACACCGTCAT	NA	False	NA	NA	False	NA	NA	NA	123005548	122997437	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_122997573_123000777_123000849_123001053_123001159_123004393_123004490_123005239
H1_mix_00020089	chr12	-	1054	1	FSM	ENSG00000280120.1	ENST00000625082.1	1054	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCGTGTGGCCTTTGTGT	NA	False	NA	-5	True	AATAAA	-17	NA	123153377	123152323	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_123152300_123153400
H1_mix_00020090	chr12	-	8075	23	Fusion	ENSG00000051825.15_ENSG00000280120.1	novel	6369	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	18	junction_21	22.5709167069425	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCGTGTGGCCTTTGTGT	-2	True	NA	-5	True	AATAAA	-17	NA	123233126	123152323	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr12_-_123156909_123160780_123160850_123161135_123161384_123162114_123162219_123163013_123163135_123163949_123164091_123165301_123165478_123166654_123166790_123176687_123176790_123179925_123179991_123181162_123181211_123194385_123194602_123198246_123198335_123202163_123202320_123202623_123203085_123210055_123210163_123214743_123214835_123218375_123218500_123221371_123221896_123223037_123223128_123227462_123227573_123230260_123230523_123233074
H1_mix_00020091	chr12	-	8372	24	FSM	ENSG00000051825.15_ENSG00000280120.1	ENST00000606320.6	6369	24	-112	-1891	-15	0	multi-exon	FALSE	canonical	3	67	junction_15	14.4842003745976	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCGTGTGGCCTTTGTGT	NA	False	NA	-5	True	AATAAA	-17	NA	123233253	123152323	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_123156909_123160780_123160850_123161135_123161384_123162114_123162219_123163013_123163135_123163949_123164091_123165301_123165478_123166654_123166790_123176687_123176790_123179925_123179991_123181162_123181211_123194385_123194602_123198246_123198335_123202163_123202320_123202623_123203085_123203249_123203376_123210055_123210163_123214743_123214835_123218375_123218500_123221371_123221896_123223037_123223128_123227462_123227617_123230260_123230523_123233074
H1_mix_00020092	chr12	-	8134	23	Fusion	ENSG00000051825.15_ENSG00000280120.1	novel	6369	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	57	junction_15	15.3048903760036	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCGTGTGGCCTTTGTGT	-17	True	NA	-5	True	AATAAA	-17	NA	123233141	123152323	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr12_-_123156909_123160780_123160850_123161135_123161384_123162114_123162219_123163013_123163135_123163949_123164091_123165301_123165478_123166654_123166790_123176687_123176790_123179925_123179991_123181162_123181211_123194385_123194602_123198246_123198335_123202163_123202320_123202623_123203085_123210055_123210163_123214743_123214835_123218375_123218500_123221371_123221896_123223037_123223128_123227462_123227617_123230260_123230523_123233074
H1_mix_00020094	chr12	-	793	3	FSM	ENSG00000111328.7	ENST00000543217.6	793	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	2.5	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGACTCTCTGCCTACAT	9837	False	NA	NA	False	ATTAAA	-17	NA	123260447	123252029	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_123252543_123259042_123259149_123260273
H1_mix_00020097	chr12	-	1308	4	FSM	ENSG00000111328.7	ENST00000535979.5	1281	4	0	-27	0	0	multi-exon	FALSE	canonical	3	124	junction_3	1140.62682572152	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTACGTGCTGTTTTATT	1098	False	NA	-6	True	ATTAAA	-17	NA	123271141	123260975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_123261804_123265195_123265323_123267184_123267283_123270886
H1_mix_00020098	chr12	-	1351	4	FSM	ENSG00000111328.7	ENST00000261692.7	1346	4	0	-5	0	0	multi-exon	FALSE	canonical	3	1896	junction_3	306.115809602982	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTGCTGTTTTATTTTTTT	-8	True	NA	-1	True	ATTAAA	-22	NA	123271856	123260970	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_123261804_123265195_123265323_123267184_123267283_123271563
H1_mix_00020099	chr12	-	1700	3	FSM	ENSG00000111328.7	ENST00000542174.5	1812	3	112	0	112	0	multi-exon	FALSE	canonical	3	2511	junction_1	32	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTAACAATTTGTATTAAA	4274	False	NA	36	True	AATAAA	-10	NA	123267965	123261011	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_123261804_123265195_123265323_123267184
H1_mix_00020100	chr12	-	5524	1	ISM	ENSG00000139697.14	ENST00000420886.6	10981	31	55809	0	55809	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGGTTGTGCTTTCTTTGCG	1	True	NA	-1	True	AATAAA	-15	NA	123294632	123289108	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_123289100_123294600
H1_mix_00020101	chr12	-	11122	32	FSM	ENSG00000139697.14	ENST00000267176.8	11121	32	0	-1	0	1	multi-exon	FALSE	canonical	3	30	junction_29	8.73389703031289	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTTGTGCTTTCTTTGCGC	-2	True	NA	0	True	AATAAA	-16	NA	123364843	123289107	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_123296051_123297977_123298172_123302823_123302901_123304581_123304720_123309309_123309403_123309488_123309584_123309709_123309857_123311054_123311130_123313619_123313720_123315372_123315445_123315547_123315661_123317220_123317357_123319899_123320032_123320431_123320608_123320698_123320867_123321534_123321733_123323679_123323832_123325501_123325600_123326151_123326335_123327425_123327580_123327706_123327813_123327891_123328028_123328733_123328896_123330418_123330510_123331241_123331376_123334052_123334214_123336394_123336492_123340987_123341089_123345257_123345568_123348028_123348134_123350309_123350442_123364700
H1_mix_00020102	chr12	-	11129	32	FSM	ENSG00000139697.14	ENST00000602398.3	11128	32	0	-1	0	1	multi-exon	FALSE	canonical	3	29	junction_29	8.82421698571778	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTTGTGCTTTCTTTGCGC	-6	True	NA	0	True	AATAAA	-16	NA	123364847	123289107	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_123296051_123297977_123298172_123302823_123302901_123304581_123304720_123309309_123309403_123309488_123309584_123309709_123309857_123311054_123311130_123313619_123313720_123315372_123315445_123315547_123315661_123317220_123317357_123319899_123320032_123320431_123320608_123320698_123320867_123321534_123321733_123323679_123323832_123325501_123325600_123326151_123326335_123327425_123327580_123327706_123327813_123327891_123328028_123328733_123328896_123330418_123330510_123331241_123331376_123334052_123334214_123336394_123336492_123340987_123341089_123345257_123345571_123348028_123348134_123350309_123350442_123364700
H1_mix_00020105	chr12	-	3935	7	FSM	ENSG00000188026.13	ENST00000376874.9	3933	7	0	-2	0	2	multi-exon	FALSE	canonical	2	37	junction_2	14.135259302735	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGTACATGTGTGTATA	-1	True	NA	-6	True	AATAAA	-22	NA	123533719	123470051	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_123472683_123484179_123484273_123485632_123485806_123498543_123498766_123499417_123499537_123523494_123523646_123533173
H1_mix_00020109	chr12	-	2778	5	FSM	ENSG00000119242.9	ENST00000238156.8	2790	5	0	12	0	-12	multi-exon	FALSE	canonical	3	68	junction_4	26.7581763205193	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTATGGAAAGAGATTTA	1	True	NA	-15	True	ATTAAA	-21	NA	123972831	123935637	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_123937831_123942743_123942786_123943346_123943494_123944271_123944365_123972528
H1_mix_00020110	chr12	-	1809	4	FSM	ENSG00000119242.9	ENST00000545891.5	1790	4	0	-19	0	0	multi-exon	TRUE	canonical	3	27	junction_3	47.7237420531496	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTGCCTTCCTTCTGTT	0	True	NA	-18	True	NA	NA	NA	123972734	123936416	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_123937831_123942743_123942786_123943346_123943494_123972528
H1_mix_00020111	chr12	-	258	1	FSM	ENSG00000270130.1	ENST00000602347.1	528	1	-111	381	-111	-381	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATTATACATTGTTTTC	5845	False	NA	NA	False	NA	NA	NA	123961355	123961097	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_123961100_123961400
H1_mix_00020112	chr12	-	1367	1	FSM	ENSG00000269997.1	ENST00000602988.1	553	1	-815	1	-815	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTGACAGTCATTGTG	5856	False	NA	NA	False	AATAAA	-13	NA	123967444	123966077	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_123966100_123967400
H1_mix_00020113	chr12	-	253	1	FSM	ENSG00000270061.1	ENST00000602741.1	355	1	133	-31	133	31	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGTATTTCTTTCTTT	3089	False	NA	NA	False	TTTAAA	-21	NA	123970211	123969958	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_123970000_123970200
H1_mix_00020114	chr12	-	7236	36	FSM	ENSG00000196498.13	ENST00000356219.7	7226	36	0	-10	0	9	multi-exon	TRUE	canonical	3	126	junction_21	108.464594053845	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTCTCTACCTCAGAC	0	True	NA	-3	True	ATTAAA	-27	NA	124422554	124324405	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_124325584_124326190_124326371_124327408_124327634_124330844_124330899_124332318_124332468_124333129_124333280_124334423_124334618_124335134_124335281_124335482_124335633_124336752_124337181_124340005_124340205_124340293_124340444_124340601_124340752_124341822_124342075_124343004_124343227_124344596_124344952_124346563_124346851_124347824_124347912_124348173_124348315_124350586_124350738_124354092_124354197_124354477_124354583_124354836_124354940_124355431_124355572_124356641_124356807_124362125_124362298_124363678_124363800_124372021_124372611_124374412_124374464_124378236_124378385_124385744_124385888_124398118_124398182_124400500_124400674_124402403_124402562_124419956_124420056_124422500
H1_mix_00020117	chr12	-	8904	47	NNC	ENSG00000196498.13	novel	8533	47	NA	NA	0	9	at_least_one_novel_splicesite	FALSE	canonical	3	126	junction_21	104.312077209668	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTCTCTACCTCAGAC	7	True	NA	-3	True	ATTAAA	-27	NA	124567589	124324405	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_124325584_124326190_124326371_124327408_124327634_124330844_124330899_124332318_124332468_124333129_124333280_124334423_124334618_124335134_124335281_124335482_124335633_124336752_124337181_124340005_124340205_124340293_124340444_124340601_124340752_124341822_124342075_124343004_124343227_124344596_124344952_124346563_124346851_124347824_124347912_124348173_124348315_124350586_124350738_124354092_124354197_124354477_124354583_124354836_124354940_124355431_124355572_124356641_124356804_124362125_124362295_124363678_124363800_124372021_124372611_124378236_124378385_124385744_124385888_124398118_124398182_124400500_124400674_124402403_124402559_124419956_124420056_124422500_124422556_124426621_124426801_124429612_124429707_124430614_124430788_124437929_124437997_124449814_124449868_124457105_124457163_124466172_124466287_124472951_124473132_124483595_124483774_124486440_124486569_124495146_124495369_124567307
H1_mix_00020126	chr12	-	3404	13	FSM	ENSG00000073060.17	ENST00000261693.11	3405	13	0	1	0	-1	multi-exon	FALSE	canonical	3	57	junction_2	116.621419797375	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTTTTTTTTATTTCTT	-1	True	NA	NA	False	CATAAA	-18	NA	124863864	124776856	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_124778587_124782682_124782812_124786356_124786504_124787405_124787458_124795194_124795269_124800123_124800243_124807760_124807928_124810173_124810290_124811869_124811966_124814201_124814406_124814972_124815115_124817549_124817708_124863594
H1_mix_00020127	chr12	-	3328	12	FSM	ENSG00000073060.17	ENST00000339570.9	3329	12	0	1	0	-1	multi-exon	FALSE	canonical	3	286	junction_1	34.9391442604551	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTTTTTTTTATTTCTT	-3	True	NA	NA	False	CATAAA	-18	NA	124863917	124776856	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_124778587_124786356_124786504_124787405_124787458_124795194_124795269_124800123_124800243_124807760_124807928_124810173_124810290_124811869_124811966_124814201_124814406_124814972_124815115_124817549_124817708_124863594
H1_mix_00020137	chr12	-	2755	8	FSM	ENSG00000139370.12	ENST00000266771.10	2751	8	0	-4	0	4	multi-exon	FALSE	canonical	3	238	junction_6	30.1222000985239	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGTTCTTTGCGTGGTTTG	34	True	NA	2	True	TATAAA	-28	NA	128823958	128793189	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_128794357_128799258_128799418_128800853_128801010_128808787_128808957_128809395_128809474_128809942_128810112_128814774_128815071_128823397
H1_mix_00020138	chr12	-	761	5	FSM	ENSG00000139370.12	ENST00000376740.8	761	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	125.647075174872	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGGCCTTTGCTGCAGGT	3	True	NA	NA	False	NA	NA	NA	128823522	128808805	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_128808957_128809395_128809474_128809942_128810054_128814774_128815071_128823397
H1_mix_00020139	chr12	-	7075	9	FSM	ENSG00000151952.16	ENST00000422113.7	6135	9	-195	-745	-195	744	multi-exon	FALSE	canonical	2	18	junction_4	10.5682306939241	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTGTTGCCCAGGCT	-2	True	NA	NA	False	NA	NA	NA	129904220	129070980	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_129075060_129078533_129078726_129081758_129082033_129084496_129084703_129209519_129209664_129337633_129337818_129531058_129531206_129699809_129700699_129903260
H1_mix_00020140	chr12	-	3444	11	FSM	ENSG00000111450.14	ENST00000392373.7	3441	11	0	-3	0	3	multi-exon	FALSE	canonical	3	150	junction_1	29.6587255289232	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGTGGCTGTTACTGTG	-8	True	NA	-14	True	AATAAA	-21	NA	130839250	130789596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_130791978_130795994_130796121_130798524_130798636_130801152_130801291_130801414_130801489_130806981_130807091_130808630_130808705_130812956_130813032_130821688_130821789_130827192_130827268_130839069
H1_mix_00020141	chr12	-	3334	10	FSM	ENSG00000111450.14	ENST00000261653.10	3331	10	0	-3	0	3	multi-exon	FALSE	canonical	3	29	junction_1	63.4350061086148	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGTGGCTGTTACTGTG	-24	True	NA	-14	True	AATAAA	-21	NA	130839266	130789596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_130791978_130798524_130798636_130801152_130801291_130801414_130801489_130806981_130807091_130808630_130808705_130812956_130813032_130821688_130821789_130827192_130827268_130839069
H1_mix_00020142	chr12	-	483	1	FSM	ENSG00000226356.2	ENST00000464655.1	1109	1	-21	647	-21	-647	mono-exon	FALSE	NA	NA	NA	NA	NA	199	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTTTAGACGAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	131293197	131292714	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_131292700_131293200
H1_mix_00020149	chr12	-	2902	11	FSM	ENSG00000182870.13	ENST00000328957.13	2933	11	29	2	29	-2	multi-exon	FALSE	canonical	1	1	junction_6	2.60768096208106	261	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCAGTTGCTTACTATTG	3	True	NA	NA	False	AATAAA	-25	NA	132329560	132196373	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_132197254_132197791_132197960_132199173_132199270_132201123_132201262_132203504_132203691_132247909_132248028_132257688_132257887_132260947_132261123_132262458_132262626_132286249_132286431_132328965
H1_mix_00020152	chr12	-	5867	25	NIC	ENSG00000177084.18	novel	5455	30	NA	NA	-553	4	combination_of_known_junctions	FALSE	canonical	3	25	junction_10	52.2764420067863	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTCACTGTGTATTTGT	2697	False	NA	NA	False	NA	NA	NA	132661466	132623757	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_132624811_132624904_132624995_132625644_132625771_132626116_132626318_132632314_132632509_132632663_132632796_132634185_132634379_132635891_132636025_132638013_132638140_132639124_132639299_132641017_132641852_132642176_132642398_132642505_132642730_132642819_132642997_132643223_132643331_132643406_132643561_132643836_132643978_132648928_132649073_132649305_132649516_132649676_132649890_132657135_132657259_132657348_132657430_132657867_132657971_132659294_132659510_132660968
H1_mix_00020153	chr12	-	8316	49	FSM	ENSG00000177084.18	ENST00000320574.10	7823	49	0	-493	0	484	multi-exon	TRUE	canonical	0	0	junction_36	50.648691301509	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCCGTGGGGTGACCTGA	11	True	NA	NA	False	NA	NA	NA	132687342	132623268	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_132624811_132624904_132624995_132625644_132625771_132626116_132626318_132632314_132632509_132632663_132632796_132634185_132634379_132635891_132636025_132638013_132638140_132639124_132639299_132641646_132641852_132642176_132642398_132642505_132642730_132642819_132642997_132643223_132643331_132643406_132643561_132643836_132643978_132648928_132649073_132649305_132649516_132649676_132649890_132657135_132657259_132657348_132657430_132657867_132657971_132659294_132659510_132660968_132661165_132661526_132661685_132664003_132664149_132664369_132664463_132665301_132665451_132667502_132667649_132668355_132668503_132668634_132668738_132668810_132668940_132672214_132672323_132672626_132672840_132673163_132673278_132673574_132673708_132675397_132675518_132675734_132675821_132676093_132676205_132676545_132676654_132677362_132677444_132677577_132677720_132679496_132679652_132679953_132680047_132680177_132680223_132680606_132680688_132681137_132681280_132687253
H1_mix_00020159	chr12	-	4590	13	FSM	ENSG00000176915.15	ENST00000357997.10	4590	13	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_4	58.6095839716794	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGCGTGGTAATAATTGCAA	256	False	132761845	4	True	AATGAA	-17	NA	132761832	132725502	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_132727444_132728031_132728164_132729678_132730271_132734384_132734576_132735405_132735513_132736892_132737066_132741418_132741486_132743153_132743277_132747831_132748021_132748137_132748332_132750642_132750850_132754674_132755134_132761617
H1_mix_00020164	chr12	-	9418	24	FSM	ENSG00000090615.16	ENST00000204726.9	9426	24	0	8	0	4	multi-exon	FALSE	canonical	3	10	junction_23	5.78832669239743	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATTCATTGGAAGCTTCA	-13	True	NA	-12	True	AATAAA	-22	NA	132828869	132768909	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_132773295_132774156_132774321_132775140_132775306_132776633_132776757_132776957_132777091_132777665_132777806_132780797_132780915_132782295_132782494_132784163_132784308_132786338_132786556_132786692_132786788_132789026_132789291_132791215_132791294_132795851_132796221_132796538_132796701_132798339_132798478_132801766_132801970_132804715_132805023_132807176_132807289_132807890_132808550_132813306_132813420_132816539_132816813_132821995_132822312_132828326
H1_mix_00020166	chr12	-	1104	4	FSM	ENSG00000090615.16	ENST00000685580.1	1125	4	15	6	2	0	multi-exon	FALSE	canonical	3	10	junction_3	6.12825877028341	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTAATTTGAAAATGCTTT	5	True	NA	-4	True	AATAAA	-14	NA	132828851	132812953	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_132813420_132816539_132816813_132821995_132822312_132828802
H1_mix_00020169	chr12	-	2993	16	FSM	ENSG00000072609.18	ENST00000443047.6	2990	16	0	-3	0	0	multi-exon	FALSE	canonical	2	50	junction_12	90.6091974728099	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGTGTTGGGCTCGTGTC	-3	True	NA	-11	True	AATAAA	-23	NA	132887603	132840348	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_132841597_132843010_132843084_132844026_132844135_132847042_132847131_132848084_132848156_132848640_132848725_132851617_132851738_132853430_132853574_132856467_132856631_132857404_132857560_132859067_132859228_132861466_132861635_132872284_132872395_132877554_132877655_132887195_132887341_132887546
H1_mix_00020170	chr12	-	2982	16	NIC	ENSG00000072609.18	novel	2990	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	50	junction_12	89.2055304713035	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCTCGTGTTGGGCTCGT	2	True	NA	-14	True	AATAAA	-20	NA	132887598	132840351	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_132841597_132843010_132843084_132844026_132844135_132847042_132847131_132848084_132848156_132848640_132848725_132851617_132851735_132853430_132853574_132856467_132856631_132857404_132857560_132859067_132859228_132861466_132861635_132872284_132872395_132877554_132877655_132887195_132887341_132887546
H1_mix_00020173	chr12	-	6156	5	FSM	ENSG00000196458.11	ENST00000392321.3	6156	5	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_1	12.1346610995116	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGGATTCTCCCATGCCC	-11	True	NA	-10	True	AATAAA	-13	NA	132956306	132921461	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_132927163_132932712_132932806_132933034_132933156_132945620_132945798_132956242
H1_mix_00020176	chr12	+	236	1	Intergenic	novelGene_277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	495	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAGGTCAAGTTGTTTGC	NA	False	NA	NA	False	ATTAAA	-45	NA	10334808	10335044	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_10334800_10335000
H1_mix_00020177	chr12	+	336	1	Intergenic	novelGene_278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCAGGAGTAGTCAGGG	NA	False	NA	NA	False	NA	NA	NA	10335512	10335848	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_10335500_10335800
H1_mix_00020178	chr12	+	286	1	Intergenic	novelGene_279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTCGGGGGTTCTTACCTT	NA	False	NA	NA	False	NA	NA	NA	10337175	10337461	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_10337200_10337500
H1_mix_00020179	chr12	+	1233	1	Intergenic	novelGene_280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGATATGTATGGCAGCCG	NA	False	NA	NA	False	NA	NA	NA	11025206	11026439	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_11025200_11026400
H1_mix_00020180	chr12	+	626	1	Intergenic	novelGene_281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGTGGATAGGCAAAACAAT	NA	False	NA	NA	False	NA	NA	NA	11464112	11464738	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_11464100_11464700
H1_mix_00020181	chr12	+	220	1	Intergenic	novelGene_282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGTTGGGAAGTTTTAAG	NA	False	NA	NA	False	AAAAAG	-34	NA	11465000	11465220	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_11465000_11465200
H1_mix_00020182	chr12	+	494	1	Intergenic	novelGene_283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGAGGAGCAGAGGCTGA	3895	False	NA	NA	False	GATAAA	-11	NA	11613199	11613693	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_11613200_11613700
H1_mix_00020183	chr12	+	276	1	Intergenic	novelGene_286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGATCTGAGTCACGGCACC	NA	False	NA	NA	False	NA	NA	NA	13264818	13265094	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_13264800_13265100
H1_mix_00020184	chr12	+	233	1	Intergenic	novelGene_294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCAGGCGGGCTGAGTCCG	NA	False	NA	NA	False	NA	NA	NA	17026772	17027005	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_17026800_17027000
H1_mix_00020185	chr12	+	346	1	Intergenic	novelGene_297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTACCCTCCACTGTGAGT	NA	False	NA	NA	False	NA	NA	NA	23508849	23509195	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_23508800_23509200
H1_mix_00020186	chr12	+	488	1	Intergenic	novelGene_299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	679	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAGTCAAC	NA	False	NA	NA	False	NA	NA	NA	30752090	30752578	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_30752100_30752600
H1_mix_00020187	chr12	+	709	1	Intergenic	novelGene_300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGTCAATATAATGCACTG	NA	False	NA	NA	False	NA	NA	NA	31613234	31613943	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_31613200_31613900
H1_mix_00020188	chr12	+	795	1	Antisense	novelGene_ENSG00000233381.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAGAATCTGAGAGGGATA	NA	False	NA	NA	False	AATATA	-19	NA	31614257	31615052	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr12_+_31614300_31615100
H1_mix_00020189	chr12	+	821	1	Intergenic	novelGene_301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAATCTGCTCACCTTGG	NA	False	NA	NA	False	NA	NA	NA	32415412	32416233	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_32415400_32416200
H1_mix_00020190	chr12	+	1104	1	Intergenic	novelGene_302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAACACTTAA	NA	False	NA	NA	False	CATAAA	-29	NA	39440563	39441667	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_39440600_39441700
H1_mix_00020191	chr12	+	436	1	Intergenic	novelGene_303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCGGGAGGACAGGCAAAA	NA	False	NA	NA	False	NA	NA	NA	42195815	42196251	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_42195800_42196300
H1_mix_00020192	chr12	+	277	1	Intergenic	novelGene_306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	390	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CGTCTCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	50364755	50365032	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_50364800_50365000
H1_mix_00020193	chr12	+	225	1	Intergenic	novelGene_308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTTTTTAAATGTGTGT	817	False	NA	NA	False	AATAGA	-36	NA	53142829	53143054	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_53142800_53143100
H1_mix_00020194	chr12	+	1327	1	Intergenic	novelGene_309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGAGCGAGACTCCATCT	NA	False	NA	NA	False	NA	NA	NA	53494193	53495520	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_53494200_53495500
H1_mix_00020195	chr12	+	265	1	Intergenic	novelGene_310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCCGTCTCAAAAAAAAAAAT	4260	False	NA	NA	False	NA	NA	NA	55714244	55714509	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_55714200_55714500
H1_mix_00020197	chr12	+	307	1	Intergenic	novelGene_320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCACAGGGGATGCGATG	NA	False	NA	NA	False	NA	NA	NA	72215101	72215408	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_72215100_72215400
H1_mix_00020199	chr12	+	261	1	Intergenic	novelGene_322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTTAGCGCGGTCAGAA	NA	False	NA	NA	False	AAAACA	-22	NA	72706629	72706890	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_72706600_72706900
H1_mix_00020200	chr12	+	330	1	Intergenic	novelGene_323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGGTGGAATGTCATCAG	NA	False	NA	NA	False	NA	NA	NA	72816119	72816449	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_72816100_72816400
H1_mix_00020201	chr12	+	442	1	Intergenic	novelGene_325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTCCCCTCAGTACCA	771	False	NA	NA	False	NA	NA	NA	79541010	79541452	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_79541000_79541500
H1_mix_00020204	chr12	+	450	1	Intergenic	novelGene_328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACAATTAAAATTATAGAG	NA	False	NA	NA	False	NA	NA	NA	99494305	99494755	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_99494300_99494800
H1_mix_00020205	chr12	+	317	1	Intergenic	novelGene_329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	255	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGGCTTGGGAAAACAGT	NA	False	NA	NA	False	NA	NA	NA	103223263	103223580	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_103223300_103223600
H1_mix_00020206	chr12	+	234	1	Intergenic	novelGene_331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	694	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACCATCAATACCCACAAC	NA	False	NA	NA	False	NA	NA	NA	103225519	103225753	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_103225500_103225800
H1_mix_00020207	chr12	+	237	1	Intergenic	novelGene_332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTCAGGTTGCTGCCAAA	NA	False	NA	NA	False	NA	NA	NA	103226202	103226439	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_103226200_103226400
H1_mix_00020208	chr12	+	828	1	Intergenic	novelGene_333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAGGACCAGAATAGACA	915	False	NA	NA	False	NA	NA	NA	104031666	104032494	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_104031700_104032500
H1_mix_00020209	chr12	+	616	1	Intergenic	novelGene_334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCATTTGCCATTCTTGA	NA	False	NA	NA	False	NA	NA	NA	106347575	106348191	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_106347600_106348200
H1_mix_00020210	chr12	+	508	1	Intergenic	novelGene_335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACTGTACCCATGAAACA	9731	False	NA	NA	False	NA	NA	NA	109062328	109062836	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_109062300_109062800
H1_mix_00020211	chr12	+	498	1	Intergenic	novelGene_336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTGTTACATAAACTCT	NA	False	NA	NA	False	NA	NA	NA	111092805	111093303	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_111092800_111093300
H1_mix_00020213	chr12	+	4017	1	Intergenic	novelGene_337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATGCTATCCCTCCCTTA	NA	False	NA	NA	False	NA	NA	NA	113807076	113811093	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_113807100_113811100
H1_mix_00020215	chr12	+	1172	1	Intergenic	novelGene_338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	204	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTCTACTGAAAATACAAAAT	8576	False	NA	NA	False	NA	NA	NA	121590906	121592078	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_121590900_121592100
H1_mix_00020216	chr12	+	1130	1	Intergenic	novelGene_339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGATTCTGACGGGGGGG	5051	False	NA	NA	False	NA	NA	NA	123361335	123362465	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_123361300_123362500
H1_mix_00020218	chr12	+	4051	14	NIC	ENSG00000139044.12	novel	5493	20	NA	NA	19	122	intron_retention	FALSE	canonical	3	73	junction_7	15.7829208867046	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAAGCTTTTATGTGAAC	0	True	NA	20	True	AATAAA	-21	NA	459957	555552	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_460546_535165_535270_536217_536296_544338_544435_544881_544973_545368_545470_546645_546714_548023_548103_548230_548298_549768_549913_550921_551032_552062_552164_552466_552529_553190
H1_mix_00020219	chr12	+	12061	27	NIC	ENSG00000060237.19	novel	10796	28	NA	NA	-13	563	intron_retention	FALSE	canonical	3	10	junction_10	23.0505297786607	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCCCCTCTCAAAAAAAAAG	-12	True	NA	NA	False	NA	NA	NA	752565	912015	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_754325_813641_813815_827041_827263_830002_830161_857160_857250_859244_859465_861012_861344_862082_862271_871264_871349_878211_878362_879572_881000_881691_881790_881910_882074_882942_883060_883394_883569_883773_883832_884120_884244_884648_886085_887220_887305_889139_889224_890452_890514_894561_894636_896070_896733_897478_897682_900475_900671_907846_908035_908474
H1_mix_00020224	chr12	+	9382	18	NIC	ENSG00000082805.21	novel	9308	19	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	3	33	junction_5	26.8887236626734	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCGTGCTGTGTCCTT	-6	True	NA	8	True	TATAAA	-8	NA	991222	1495924	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_991488_1027747_1028573_1083163_1083581_1104749_1104825_1110191_1110348_1115865_1116034_1141619_1141788_1180539_1180678_1181924_1182066_1183280_1183422_1189858_1190053_1236768_1236905_1263033_1263166_1289851_1290013_1371832_1371978_1408148_1408248_1444561_1444751_1490092
H1_mix_00020226	chr12	+	1344	3	FSM	ENSG00000151067.23	ENST00000673589.2	1452	3	0	108	0	-108	multi-exon	FALSE	non_canonical	0	0	junction_2	2	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGAGTGTGTTTACTTTT	-4	True	NA	NA	False	AAAAAG	-1	NA	2053284	2121019	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_2053612_2115223_2115546_2120324
H1_mix_00020228	chr12	+	511	5	FSM	ENSG00000151067.23	ENST00000465934.1	581	5	70	0	70	0	multi-exon	FALSE	canonical	1	1	junction_3	1.08972473588517	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAGGCCATGAAGGAGGC	NA	False	NA	NA	False	NA	NA	NA	2666685	2677813	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_2666783_2668932_2669036_2674540_2674643_2677093_2677222_2677732
H1_mix_00020229	chr12	+	727	4	FSM	ENSG00000004478.8	ENST00000543037.1	727	4	0	0	0	0	multi-exon	FALSE	canonical	3	1266	junction_2	18.4028983224563	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATGAGGAAGCACAGAAAG	1337	False	NA	NA	False	NA	NA	NA	2798766	2800465	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_2799245_2799849_2799941_2800038_2800123_2800391
H1_mix_00020230	chr12	+	2496	12	NIC	ENSG00000111203.13	novel	2320	12	NA	NA	-13	93	intron_retention	FALSE	canonical	3	21	junction_11	29.2017773714699	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGTCGAGGAGTTTGAAA	-18	True	NA	111	True	NA	NA	NA	2812654	2825169	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_2812857_2817222_2817319_2817908_2817951_2818105_2818278_2820085_2820226_2820723_2820873_2821261_2821360_2821542_2821597_2821691_2821793_2822793_2822912_2823769_2824014_2824089
H1_mix_00020231	chr12	+	1423	9	FSM	ENSG00000111203.13	ENST00000537851.5	1419	9	-4	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	37.6264534602984	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGAAAACAGAGACTTGTT	8	True	NA	NA	False	NA	NA	NA	2812680	2824502	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_2812857_2820085_2820226_2820723_2820873_2821261_2821360_2821542_2821597_2821691_2821793_2822793_2822912_2823769_2823944_2824089
H1_mix_00020232	chr12	+	1088	6	FSM	ENSG00000111203.13	ENST00000537183.1	1088	6	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_4	10.3421467790783	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACCCCCGCCCCCATGGC	6985	False	NA	NA	False	NA	NA	NA	2819657	2822911	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_2820226_2820723_2820873_2821261_2821360_2821542_2821597_2821691_2821793_2822793
H1_mix_00020234	chr12	+	1255	2	FSM	ENSG00000111203.13	ENST00000545509.2	1302	2	47	0	47	0	multi-exon	FALSE	canonical	2	5	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGTTGAAGTTGGTAGT	NA	False	NA	NA	False	ATTAAA	-14	NA	2857334	2859791	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_2858332_2859533
H1_mix_00020235	chr12	+	1107	10	NIC	ENSG00000078246.17	novel	3080	11	NA	NA	-4	-8	combination_of_known_junctions	FALSE	canonical	3	27	junction_2	44.8503685108111	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGCAGATGACGTGTTC	16	False	NA	NA	False	NA	NA	NA	2890902	2939337	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_2890989_2909528_2909581_2922261_2922403_2930247_2930346_2931036_2931241_2933417_2933531_2934446_2934562_2937630_2937730_2938113_2938286_2939310
H1_mix_00020236	chr12	+	449	4	FSM	ENSG00000078246.17	ENST00000538704.1	449	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	65.5794683316865	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGCAGGAGAGGCTTTGG	NA	False	NA	NA	False	NA	NA	NA	2937710	2940338	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_2937730_2938113_2938286_2939310_2939425_2940194
H1_mix_00020237	chr12	+	7116	14	Fusion	ENSG00000250899.3_ENSG00000197905.10	novel	1710	13	NA	NA	-16	1077	multi-exon	TRUE	non_canonical	2	46	junction_13	64.2191145575538	389	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTGTGTGCGTGATCTT	-1	True	NA	9	True	AGTAAA	-20	NA	2959313	3046027	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr12_+_2959482_2959947_2960041_2994737_2994993_3011003_3011069_3012169_3012233_3017397_3017527_3018544_3018589_3019114_3019171_3020633_3020774_3021843_3022018_3037967_3038109_3040106_3040260_3040364_3043441_3043468
H1_mix_00020238	chr12	+	587	3	FSM	ENSG00000197905.10	ENST00000540314.2	578	3	-9	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	92	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCCTCTGGGGGCAGTCAG	-8	True	NA	NA	False	NA	NA	NA	2959396	2994833	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_2959482_2959947_2960354_2994737
H1_mix_00020239	chr12	+	1465	11	NIC	ENSG00000197905.10	novel	1637	12	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_4	100.330653341838	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCAGAGGACCTGGTCTG	4	True	NA	12	True	AATAAA	-17	NA	2959408	3040665	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_2959482_2994737_2994993_3011003_3011069_3012169_3012233_3018544_3018589_3019114_3019171_3020633_3020774_3021843_3022018_3037967_3038109_3040106_3040260_3040364
H1_mix_00020240	chr12	+	3177	1	FSM	ENSG00000118976.5	ENST00000237841.5	3067	1	-124	14	-124	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGACGGTTGTTGCCGAA	NA	False	NA	NA	False	NA	NA	NA	3839334	3842511	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_3839300_3842500
H1_mix_00020241	chr12	+	673	2	ISM	ENSG00000256969.2	ENST00000669712.1	903	4	5998	4	-2077	-3	3prime_fragment	FALSE	canonical	3	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTGCCCACGCCTAGAT	7010	False	NA	15	True	AATAAA	-15	NA	4018899	4026654	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_4019140_4026221
H1_mix_00020242	chr12	+	295	1	Intergenic	novelGene_267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCACTTTGAATTTTTCCA	724	False	NA	NA	False	AATACA	-32	NA	4019659	4019954	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_4019700_4020000
H1_mix_00020243	chr12	+	1871	1	FSM	ENSG00000256356.1	ENST00000456928.2	2069	1	190	8	190	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTTGATTAAGCCGACCC	NA	False	NA	NA	False	NA	NA	NA	4097640	4099511	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_4097600_4099500
H1_mix_00020244	chr12	+	695	6	FSM	ENSG00000111247.15	ENST00000536346.5	707	6	10	2	10	-2	multi-exon	FALSE	canonical	3	34	junction_3	164.368366786313	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTTTTATTCTACTTCG	NA	False	NA	NA	False	NA	NA	NA	4538807	4548836	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_4538957_4541883_4541934_4543762_4543912_4546308_4546419_4548091_4548179_4548686
H1_mix_00020248	chr12	+	920	4	NIC	ENSG00000010219.14	novel	1840	12	NA	NA	7	114	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	14.522013940528	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCATTAATGGAACTCCAA	35	True	NA	NA	False	NA	NA	NA	4604963	4614002	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_4605087_4610154_4610285_4612542_4612719_4613511
H1_mix_00020249	chr12	+	5037	3	ISM	ENSG00000010219.14	ENST00000545571.5	855	4	836	50	776	0	3prime_fragment	FALSE	canonical	3	17	junction_2	15	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCAGACTGTTTTTTTT	748	False	NA	-25	True	NA	NA	NA	4605732	4613823	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_4610285_4612542_4612719_4613514
H1_mix_00020250	chr12	+	5044	10	ISM	ENSG00000130035.9	ENST00000252318.7	2321	11	6116	-3196	6116	2778	3prime_fragment	FALSE	canonical	2	7	junction_2	7.98609903380729	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGCAATAGCAGCTTAAT	5700	False	NA	NA	False	ACTAAA	-26	NA	4726515	4775922	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_4726830_4739162_4739330_4744516_4744701_4745428_4745627_4746143_4746259_4760957_4761144_4763252_4763391_4763951_4764048_4765378_4765547_4772444
H1_mix_00020251	chr12	+	5476	1	FSM	ENSG00000151079.7	ENST00000280684.3	4237	1	127	-1366	127	1366	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGTAGGTTCTACTGGA	0	True	NA	NA	False	NA	NA	NA	4809302	4814778	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_4809300_4814800
H1_mix_00020255	chr12	+	209	2	FSM	ENSG00000111321.11	ENST00000543542.1	367	2	6	152	6	75	multi-exon	FALSE	canonical	3	15	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATGCAGGCTGACTCCAC	2276	False	NA	NA	False	NA	NA	NA	6388397	6388900	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6388506_6388799
H1_mix_00020256	chr12	+	233	1	FSM	ENSG00000256913.1	ENST00000541242.1	2494	1	325	1936	325	-1936	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTGGTGCCACCGAGATA	NA	False	NA	NA	False	AAGAAA	-15	NA	6478038	6478271	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6478000_6478300
H1_mix_00020258	chr12	+	643	3	FSM	ENSG00000010292.13	ENST00000536090.1	654	3	6	5	6	-5	multi-exon	FALSE	canonical	3	419	junction_2	8	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAACATGAGTCCTCCTTC	-3	True	NA	NA	False	ATTAAA	-18	NA	6517364	6518198	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6517500_6517595_6517684_6517778
H1_mix_00020260	chr12	+	1203	9	NNC	ENSG00000111640.15	novel	1285	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	8106.70831395209	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTAGGGAGCCGCACCTT	22	False	NA	-26	True	NA	NA	NA	6534540	6538314	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_6534570_6534809_6534862_6536493_6536594_6536683_6536791_6536919_6537011_6537100_6537217_6537308_6537391_6537583_6537996_6538100
H1_mix_00020261	chr12	+	1333	8	FSM	ENSG00000111640.15	ENST00000474249.5	1333	8	0	0	0	0	multi-exon	FALSE	canonical	3	20749	junction_1	1549.42605568669	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTAGGGAGCCGCACCTT	22	False	NA	-26	True	NA	NA	NA	6534540	6538314	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6534570_6534809_6534862_6536493_6536594_6536683_6537011_6537100_6537217_6537308_6537391_6537583_6537997_6538100
H1_mix_00020266	chr12	+	1553	5	FSM	ENSG00000089692.9	ENST00000441671.6	1576	5	23	0	22	0	multi-exon	FALSE	canonical	3	7	junction_1	6.40312423743285	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCTCTTGAGTCACAAGA	15	False	NA	NA	False	AATAAA	-17	NA	6772541	6775733	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6772911_6773191_6773340_6773696_6774002_6774594_6774865_6775272
H1_mix_00020267	chr12	+	782	6	FSM	ENSG00000110811.20	ENST00000541956.5	1102	6	0	320	0	-171	multi-exon	FALSE	canonical	3	88	junction_2	10.1469207151727	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGACCACCCTCCCCTTGC	846	False	NA	NA	False	GGGGCT	-6	NA	6831287	6837365	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6831353_6831824_6831915_6833591_6833645_6833741_6833810_6833924_6834050_6836984
H1_mix_00020268	chr12	+	1582	8	ISM	ENSG00000111664.11	ENST00000229264.8	1657	10	499	41	138	0	3prime_fragment	FALSE	canonical	2	4	junction_3	11.731694381513	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTCCTAAGACACCTGCA	503	False	NA	-18	True	NA	NA	NA	6841423	6847352	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_6841625_6842969_6843077_6843173_6843238_6843362_6843526_6843631_6843699_6843776_6843979_6845585_6845803_6846791
H1_mix_00020269	chr12	+	2542	14	FSM	ENSG00000111667.14	ENST00000537267.5	2522	14	-20	0	-20	0	multi-exon	FALSE	canonical	3	679	junction_3	57.6194411635517	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCCTGTTTGATACCT	5233	False	NA	16	True	AATAAA	-16	NA	6857380	6866632	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6857724_6858423_6858618_6859469_6859542_6860150_6860239_6860365_6860492_6860952_6861107_6861442_6861618_6862469_6862559_6863185_6863309_6863829_6863974_6864049_6864196_6864721_6864876_6865163_6865249_6865983
H1_mix_00020275	chr12	+	1376	7	FSM	ENSG00000010626.15	ENST00000451681.5	1412	7	36	0	5	0	multi-exon	FALSE	canonical	2	4	junction_5	3.8151743807532	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGTTCGGATTTCCAATAA	-15	True	NA	-30	True	NA	NA	NA	6904826	6914194	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6904904_6905584_6905760_6906408_6906663_6907314_6907446_6909889_6910027_6912729_6913028_6913890
H1_mix_00020277	chr12	+	4309	10	FSM	ENSG00000111676.15	ENST00000356654.8	4351	10	42	0	42	0	multi-exon	FALSE	canonical	1	1	junction_1	46.7826600777533	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCTGTGACTATTCTTT	41	False	NA	37	True	AAAACA	-21	NA	6924504	6942321	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6924538_6933839_6934029_6934175_6934314_6934464_6934579_6935546_6937562_6937844_6938068_6938480_6939178_6940879_6941024_6941373_6941555_6941746
H1_mix_00020278	chr12	+	4485	10	NNC	ENSG00000111676.15	novel	899	3	NA	NA	572	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	49.0532590377257	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCTGTGACTATTCTTT	23	False	NA	37	True	AAAACA	-21	NA	6928530	6942321	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_6928743_6933839_6934029_6934175_6934314_6934464_6934579_6935549_6937562_6937844_6938068_6938480_6939178_6940879_6941024_6941373_6941555_6941746
H1_mix_00020279	chr12	+	855	2	FSM	ENSG00000111676.15	ENST00000541029.1	855	2	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTCTAGCGCTGGCAGCTG	-1	True	NA	NA	False	NA	NA	NA	6937697	6938965	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6938068_6938480
H1_mix_00020280	chr12	+	981	2	FSM	ENSG00000111678.11	ENST00000544681.1	980	2	-1	0	-1	0	multi-exon	FALSE	canonical	3	1268	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTATGAAGTCAGGTGTGG	-1	True	NA	NA	False	NA	NA	NA	6943815	6945098	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6944174_6944475
H1_mix_00020283	chr12	+	2697	12	FSM	ENSG00000182326.16	ENST00000360817.10	2682	12	-15	0	-14	0	multi-exon	FALSE	canonical	3	14	junction_1	5.85923019793528	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTGACTTACCTCAT	-12	True	NA	7	True	AATAAA	-18	NA	7060702	7071032	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_7060878_7061838_7061918_7062474_7062683_7062889_7063068_7064266_7064393_7065099_7065300_7065816_7065971_7066517_7066634_7067038_7067118_7067642_7067772_7068455_7068531_7069854
H1_mix_00020287	chr12	+	3689	14	NIC	ENSG00000139197.11	novel	3252	15	NA	NA	18	-1	intron_retention	FALSE	canonical	3	53	junction_6	11.6125824434497	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATGGAACTGATGTGGG	-2	True	NA	23	True	AATAAA	-24	NA	7189732	7211458	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_7190525_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202611_7202705_7203431_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
H1_mix_00020290	chr12	+	2111	13	NNC	ENSG00000215009.6	novel	2349	13	NA	NA	-4451	9	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	19.6911923345326	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCAAGACAATTTCTTCT	NA	False	NA	11	True	AATAAA	-19	NA	7299620	7328728	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_7299796_7304282_7304533_7310538_7310747_7317136_7317281_7318025_7318183_7320724_7320805_7322417_7322542_7323233_7323315_7323458_7323561_7324272_7324401_7324498_7324599_7326975_7327096_7328286
H1_mix_00020292	chr12	+	582	1	FSM	ENSG00000284522.1	ENST00000638789.1	384	1	-143	-55	-143	55	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAATTCCTGAAAAATAAGG	5420	False	NA	NA	False	NA	NA	NA	7625959	7626541	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_7626000_7626500
H1_mix_00020295	chr12	+	292	1	FSM	ENSG00000241828.2	ENST00000480485.2	328	1	111	-75	111	75	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTGCAATGGCGCAATC	NA	False	NA	NA	False	NA	NA	NA	7860547	7860839	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_7860500_7860800
H1_mix_00020296	chr12	+	416	2	NNC	ENSG00000176654.12	novel	915	4	NA	NA	5706	-71	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTAATACTCCACAAACC	5840	False	NA	NA	False	AATACA	-15	NA	7898281	7898832	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_7898352_7898486
H1_mix_00020299	chr12	+	3963	7	FSM	ENSG00000089818.18	ENST00000638883.1	3940	7	-23	0	0	0	multi-exon	FALSE	canonical	3	171	junction_4	18.915748876414	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTGCAATAATGGTAATTAA	-9	True	NA	-11	True	TATAAA	-15	NA	8082267	8097735	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8082384_8089935_8090037_8090194_8091851_8092675_8092785_8092871_8093056_8095600_8095704_8096041
H1_mix_00020300	chr12	+	4911	5	FSM	ENSG00000089818.18	ENST00000544891.6	4899	5	-12	0	0	0	multi-exon	FALSE	canonical	3	188	junction_3	17.2536228079786	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTTTATCTTTTAATTT	-9	True	NA	25	True	ATTAAA	-16	NA	8082267	8097771	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8082384_8089935_8090037_8090194_8093056_8095600_8095704_8096041
H1_mix_00020302	chr12	+	203	2	Intergenic	novelGene_273	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTGGAGATGTGATTTC	NA	False	NA	NA	False	NA	NA	NA	8269449	8326104	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_8269481_8325932
H1_mix_00020303	chr12	+	450	2	FSM	ENSG00000166532.16	ENST00000538758.1	570	2	0	120	0	-120	multi-exon	FALSE	canonical	2	11	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTCTGTATACTAAGTG	0	True	NA	NA	False	NA	NA	NA	8681599	8714041	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8681819_8713810
H1_mix_00020304	chr12	+	555	3	FSM	ENSG00000166532.16	ENST00000541044.5	555	3	0	0	0	0	multi-exon	TRUE	canonical	2	20	junction_1	149.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCTGGACATTTCAAGAG	2762	False	NA	NA	False	AATGAA	-33	NA	8697176	8750029	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8697333_8713810_8714042_8749861
H1_mix_00020305	chr12	+	2942	3	FSM	ENSG00000249790.3	ENST00000540299.1	809	3	-680	-1453	-659	0	multi-exon	FALSE	canonical	3	38	junction_2	6	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGGGTCCATGCTGCT	6983	False	NA	NA	False	AATAAA	-16	NA	8787593	8795789	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8788787_8789999_8790264_8794304
H1_mix_00020306	chr12	+	4754	34	ISM	ENSG00000166535.20	ENST00000299698.12	5127	36	1185	10	293	-10	3prime_fragment	FALSE	canonical	3	31	junction_15	7.70579308154655	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAATCTGTGCATTTAGT	419	False	NA	7	True	AATAAA	-9	NA	8823805	8876777	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_8823883_8829726_8829780_8834661_8834683_8835506_8835667_8836254_8836340_8837439_8837567_8838335_8838451_8839112_8839223_8841368_8841537_8843133_8843362_8845441_8845503_8846076_8846223_8847548_8847699_8848719_8848915_8849668_8849760_8850159_8850275_8851783_8852013_8852209_8852337_8854127_8854250_8854779_8854832_8855508_8855593_8857163_8857341_8857506_8857589_8857945_8858103_8860880_8860956_8861134_8861298_8863793_8864009_8867841_8868058_8868229_8868358_8868536_8868628_8869134_8869204_8874424_8874528_8874970_8875013_8876057
H1_mix_00020307	chr12	+	4581	16	NNC	ENSG00000111752.11	novel	5390	15	NA	NA	283	0	intron_retention	TRUE	canonical	3	272	junction_5	947.722322202026	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTGAAAATGTGTTTAAA	-42	True	NA	22	True	ATTAAA	-21	NA	8914178	8941467	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_8914828_8917629_8917792_8919755_8919867_8920984_8921066_8921600_8921751_8922656_8922789_8930434_8930928_8932562_8933351_8933864_8934013_8934266_8934479_8935123_8935239_8936855_8936965_8937175_8937327_8937828_8938061_8939304_8939461_8940575
H1_mix_00020308	chr12	+	4862	13	NIC	ENSG00000111752.11	novel	5390	15	NA	NA	34	0	intron_retention	FALSE	canonical	3	324	junction_3	849.502288925044	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTGAAAATGTGTTTAAA	2677	False	NA	22	True	ATTAAA	-21	NA	8917688	8941467	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_8917792_8919755_8919867_8920984_8921066_8922632_8922789_8930434_8930928_8932562_8933351_8933864_8934013_8934266_8934479_8935123_8935239_8936855_8936965_8937175_8937327_8937828_8938061_8939304
H1_mix_00020311	chr12	+	1521	1	FSM	ENSG00000256720.1	ENST00000540396.1	508	1	-110	-903	-110	903	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGCAATATTCCATTGT	7298	False	NA	NA	False	AATAAA	-24	NA	9134973	9136494	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_9135000_9136500
H1_mix_00020312	chr12	+	1255	7	NNC	ENSG00000111788.10	novel	3158	29	NA	NA	6766	-15415	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	46.2673390921357	64	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACACGAGTGTCCTCAGC	295	False	NA	NA	False	NA	NA	NA	9284000	9297826	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_9284351_9288201_9288350_9293661_9293911_9294029_9294247_9294431_9294519_9294816_9294975_9297780
H1_mix_00020313	chr12	+	3021	21	NNC	ENSG00000111788.10	novel	3158	29	NA	NA	21193	849	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_12	60.4303524729088	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGAGTTTTTTATTGATA	NA	False	NA	NA	False	ATTAAA	-18	NA	9298427	9314090	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_9298529_9298779_9298868_9299259_9299469_9301093_9301247_9302227_9302275_9302622_9302703_9303974_9304020_9304139_9304208_9305718_9305758_9306014_9306124_9306236_9306369_9307201_9307315_9309872_9310021_9310338_9310442_9311140_9311291_9311549_9311619_9311730_9311832_9312277_9312324_9312616_9312696_9312874_9313030_9313104
H1_mix_00020314	chr12	+	924	5	NNC	ENSG00000284634.1	novel	2767	10	NA	NA	-33	12756	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	3.11247489949718	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CGTTAAACATTAATATAAAA	-18	True	NA	NA	False	NA	NA	NA	9448261	9607631	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_9448879_9461323_9461435_9584105_9584165_9606352_9606457_9607598
H1_mix_00020315	chr12	+	1283	1	FSM	ENSG00000233719.4	ENST00000426641.3	1289	1	227	-221	227	221	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCTCCCCTGTCCTTTT	NA	False	NA	NA	False	NA	NA	NA	9641949	9643232	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_9641900_9643200
H1_mix_00020316	chr12	+	2327	5	FSM	ENSG00000256594.9_ENSG00000257027.1	ENST00000574035.5	587	5	-108	-1632	12	202	multi-exon	FALSE	canonical	0	0	junction_1	15.6903632845132	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGGATCACACCTGTAAT	2757	False	NA	NA	False	NA	NA	NA	9648058	9658614	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_9648329_9653682_9653809_9655872_9655980_9656567_9656698_9656920
H1_mix_00020317	chr12	+	2236	4	FSM	ENSG00000256594.9	ENST00000575094.5	2612	4	376	0	256	0	multi-exon	FALSE	canonical	2	9	junction_1	13.9283882771841	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGGAAGCATTTGCTT	57	False	NA	NA	False	GATAAA	-16	NA	9648422	9658412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_9648934_9653682_9653809_9655872_9655980_9656920
H1_mix_00020319	chr12	+	3121	2	NNC	ENSG00000139083.11	novel	6144	8	NA	NA	6300	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATTTTTTATAAAAAAAA	2	False	NA	NA	False	AAGAAA	-24	NA	11892236	11895377	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_11893824_11893843
H1_mix_00020320	chr12	+	775	1	FSM	ENSG00000198134.3	ENST00000539347.1	327	1	-191	-257	-191	257	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAACTTGTATTTTTTATT	NA	False	NA	NA	False	TTTAAA	-3	NA	12110971	12111746	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_12111000_12111700
H1_mix_00020321	chr12	+	529	1	FSM	ENSG00000242405.2	ENST00000472093.2	511	1	-18	0	-18	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGGTGTTAAAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	12155243	12155772	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_12155200_12155800
H1_mix_00020322	chr12	+	1041	1	FSM	ENSG00000270857.1	ENST00000604544.1	437	1	-478	-126	-478	126	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTCTTGTAGACCTCAA	NA	False	NA	NA	False	NA	NA	NA	12248512	12249553	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_12248500_12249600
H1_mix_00020324	chr12	+	549	3	FSM	ENSG00000165714.11	ENST00000298571.6	549	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	54.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATATCATCTGACCAGGTC	72	False	NA	NA	False	GGGGCT	-45	NA	12357417	12465844	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_12357510_12435627_12435786_12465545
H1_mix_00020325	chr12	+	3066	2	FSM	ENSG00000111276.12	ENST00000614874.2	4335	2	0	1269	0	-261	multi-exon	FALSE	canonical	3	56	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTAACATAGTGACAAAATA	-8	True	NA	NA	False	NA	NA	NA	12717367	12720943	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_12718315_12718824
H1_mix_00020329	chr12	+	2375	11	FSM	ENSG00000213782.7	ENST00000545038.5	2357	11	-18	0	-10	0	multi-exon	FALSE	canonical	3	696	junction_6	52.3030591839521	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCTAACTCCTTAAAGAC	5130	False	NA	27	True	AATAAA	-21	NA	12813335	12829979	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_12813455_12814130_12814225_12821207_12821397_12821654_12821727_12821964_12822084_12822660_12822733_12823202_12824017_12824539_12824678_12825999_12826071_12827245_12827376_12829422
H1_mix_00020332	chr12	+	4390	1	FSM	ENSG00000183935.5	ENST00000624664.1	4411	1	27	-6	27	6	mono-exon	FALSE	NA	NA	NA	NA	NA	1188	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTCCCAGGCAACAACT	-5	True	NA	NA	False	AATAAA	-33	NA	13000446	13004836	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_13000400_13004800
H1_mix_00020333	chr12	+	2443	2	NIC	ENSG00000255621.1	novel	2403	5	NA	NA	9	-16245	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGAAATACCTCATGAAT	8	True	NA	-65	True	AATGAA	-2	NA	13000459	13024434	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_13000482_13022013
H1_mix_00020334	chr12	+	8016	16	NNC	ENSG00000171681.13	novel	8823	15	NA	NA	-49	0	at_least_one_novel_splicesite	TRUE	canonical	3	37	junction_15	84.422640459904	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTGAGTACTCTGATTA	0	True	NA	35	True	AATAAA	-17	NA	14365626	14502930	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_14365828_14423908_14425474_14434336_14434424_14436105_14436252_14438129_14438268_14446987_14447054_14456560_14456635_14457206_14457296_14460494_14461134_14466525_14466591_14475889_14475969_14478316_14478473_14481002_14481186_14496230_14496344_14497653_14498898_14499759
H1_mix_00020335	chr12	+	2314	8	FSM	ENSG00000171681.13	ENST00000539659.5	2298	8	-16	0	-16	0	multi-exon	FALSE	canonical	3	16	junction_7	136.829254539953	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTTCCCTCACAGCAACGT	21	False	NA	NA	False	NA	NA	NA	14365659	14460567	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_14365828_14423908_14425474_14434339_14434424_14436105_14436252_14438129_14438268_14446987_14447054_14456560_14456635_14460494
H1_mix_00020339	chr12	+	5110	3	Intergenic	novelGene_289	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	241.5	122	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATACATGCAAGTCACAG	2364	False	NA	NA	False	NA	NA	NA	14667999	14710582	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_14668025_14705466_14710368_14710398
H1_mix_00020340	chr12	+	1916	3	Intergenic	novelGene_290	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATACATGCAAGTCACAG	NA	False	NA	NA	False	NA	NA	NA	14703008	14710582	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_14703554_14704473_14705787_14710524
H1_mix_00020341	chr12	+	2095	9	FSM	ENSG00000151490.15	ENST00000543886.6	2095	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	2.3418742493994	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTGTGTTAGTTCATTT	22	False	NA	NA	False	TATAAA	-22	NA	15322521	15517067	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_15322802_15483973_15484248_15497244_15497404_15499441_15499595_15501619_15502064_15503907_15504070_15508570_15508768_15515497_15515619_15516762
H1_mix_00020344	chr12	+	386	1	ISM	ENSG00000256211.1	ENST00000444513.2	499	2	6	419	6	-419	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTGAGGAGATTCACAAGA	29	False	NA	NA	False	NA	NA	NA	16989131	16989517	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_16989100_16989500
H1_mix_00020345	chr12	+	201	1	FSM	ENSG00000255993.1	ENST00000396338.3	1335	1	83	1051	83	-1051	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGCAAGAAGGGAAAAGA	91	False	NA	NA	False	AATGAA	-12	NA	18692844	18693045	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_18692800_18693000
H1_mix_00020346	chr12	+	830	1	FSM	ENSG00000227525.4	ENST00000480903.1	738	1	-7	-85	-7	85	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCAGACTGCGACAATTT	9	False	NA	NA	False	AATAAA	-40	NA	19089143	19089973	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_19089100_19090000
H1_mix_00020347	chr12	+	4634	27	NIC	ENSG00000052126.15	novel	4797	32	NA	NA	-146	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_19	90.2365153262517	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTTAGAATTTTTGTT	4	True	NA	24	True	AATAAA	-17	NA	19129586	19376400	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_19129889_19130050_19130131_19132392_19132451_19253939_19254024_19255044_19255166_19257432_19257538_19260948_19261022_19265749_19265851_19269769_19269886_19274515_19274984_19283279_19283746_19287472_19287557_19320561_19320625_19322309_19322391_19322517_19322668_19336514_19336617_19343322_19343435_19345841_19345889_19346993_19347183_19348398_19348520_19353883_19354003_19358227_19358438_19359411_19359547_19361581_19361707_19365963_19366110_19369692_19369799_19375530
H1_mix_00020348	chr12	+	4361	25	NIC	ENSG00000052126.15	novel	4238	26	NA	NA	-146	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_11	72.0005666451468	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTTAGAATTTTTGTT	4	True	NA	24	True	AATAAA	-17	NA	19129586	19376400	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_19129889_19130050_19130131_19132392_19132451_19253939_19254024_19255044_19255166_19257432_19257538_19260948_19261022_19265749_19265851_19269769_19269886_19274515_19274984_19283279_19283746_19320561_19320625_19322309_19322391_19322517_19322668_19336514_19336617_19343322_19343435_19345841_19345889_19348398_19348520_19353883_19354003_19358227_19358438_19359411_19359547_19361581_19361707_19365963_19366110_19369692_19369799_19375530
H1_mix_00020350	chr12	+	853	1	FSM	ENSG00000243854.3	ENST00000492147.3	296	1	-532	-25	-532	25	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTTCTTTGAGCTTTTT	6	False	NA	NA	False	NA	NA	NA	19302947	19303800	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_19302900_19303800
H1_mix_00020355	chr12	+	521	4	FSM	ENSG00000111726.13	ENST00000538498.1	538	4	17	0	17	0	multi-exon	FALSE	canonical	3	909	junction_2	83.2839853886822	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAGAGCAAAGAGTATTAAG	8839	False	NA	NA	False	NA	NA	NA	22055135	22060906	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_22055292_22055454_22055611_22058566_22058701_22060831
H1_mix_00020356	chr12	+	543	3	FSM	ENSG00000111726.13	ENST00000537658.1	590	3	47	0	47	0	multi-exon	FALSE	canonical	3	1078	junction_2	42.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAGAAGTGGCATATCTT	NA	False	NA	NA	False	AAGAAA	-13	NA	22060688	22062413	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_22060927_22061280_22061453_22062280
H1_mix_00020357	chr12	+	2254	11	NIC	ENSG00000256995.8	novel	647	5	NA	NA	-83	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	33.4904463989359	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATTTATAAAGGAAAGA	3584	False	NA	7	True	AATAAA	-17	NA	22699775	23174123	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_22700095_22861068_22861225_22887963_22888045_22969362_22969466_22970835_22971095_22972375_22972469_23046107_23046202_23053990_23054155_23057165_23057298_23057779_23057898_23173388
H1_mix_00020358	chr12	+	1720	11	NIC	ENSG00000256995.8	novel	647	5	NA	NA	3	-332	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	33.5840736063986	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTAAAACATATACTGTTG	2	False	NA	-6	True	AATAAA	-2	NA	22699861	23173791	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_22700095_22887963_22888045_22969362_22969466_22970835_22971095_22972375_22972469_23046107_23046202_23053990_23054155_23057165_23057298_23057779_23057898_23167038_23167079_23173388
H1_mix_00020359	chr12	+	2120	11	NIC	ENSG00000256995.8	novel	647	5	NA	NA	3	-101	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	29.2883936056589	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGCATGCAACAAATGTGAA	2	False	NA	-94	True	NA	NA	NA	22699861	23174022	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_22700095_22887963_22888045_22969362_22969466_22970835_22971095_22972375_22972469_23046107_23046202_23053990_23054324_23057165_23057298_23057779_23057898_23167038_23167079_23173388
H1_mix_00020361	chr12	+	902	3	FSM	ENSG00000256995.8	ENST00000629078.1	902	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	5.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTGGGATCGTTTGTT	1601	False	NA	NA	False	ATTAAA	-15	NA	22861068	22871078	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_22861225_22869320_22869414_22870425
H1_mix_00020364	chr12	+	582	1	FSM	ENSG00000274987.1	ENST00000612734.1	582	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATATGTGTAAAAATATTC	NA	False	NA	NA	False	AATAAA	-14	NA	25210651	25211233	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_25210700_25211200
H1_mix_00020365	chr12	+	806	1	FSM	ENSG00000255725.2	ENST00000543961.1	1229	1	-76	499	-76	-499	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAAGGTTAAGAACTTGG	NA	False	NA	NA	False	AGTAAA	-12	NA	25803221	25804027	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_25803200_25804000
H1_mix_00020366	chr12	+	5297	4	NIC	ENSG00000123094.16	novel	5510	5	NA	NA	0	1	intron_retention	FALSE	canonical	0	0	junction_1	57.7946556544999	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTACAGTTGTCAGTTTGT	148	False	NA	NA	False	AATAAA	-20	NA	25959057	26072867	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_25959149_26064497_26065388_26067568_26067714_26068696
H1_mix_00020367	chr12	+	975	4	FSM	ENSG00000111790.14	ENST00000395941.4	865	4	-134	24	-120	-24	multi-exon	FALSE	canonical	3	198	junction_3	10.3708994574027	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTCACTGTTTCTTAGAA	NA	False	NA	NA	False	NA	NA	NA	26938349	26957947	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_26938711_26954144_26954294_26956542_26956661_26957600
H1_mix_00020368	chr12	+	6225	2	FSM	ENSG00000111790.14	ENST00000538172.1	2945	2	-1712	-1568	-1712	0	multi-exon	FALSE	canonical	3	155	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTCTCCAATTTAATTT	5546	False	NA	10	True	ATTAAA	-20	NA	26959283	26966648	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_26963456_26964595
H1_mix_00020369	chr12	+	4699	1	FSM	ENSG00000275764.1	ENST00000620519.1	1861	1	-2847	9	-2847	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAATCCCAGCACTT	NA	False	NA	8	True	AATAAA	-17	NA	27034252	27038951	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_27034300_27039000
H1_mix_00020370	chr12	+	309	2	FSM	ENSG00000211455.8	ENST00000434385.2	757	2	-53	501	0	-501	multi-exon	FALSE	canonical	3	502	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTGTTTACCATGAATG	110	False	NA	NA	False	NA	NA	NA	27244232	27297918	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_27244333_27297709
H1_mix_00020374	chr12	+	287	3	FSM	ENSG00000165935.9	ENST00000538647.1	287	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCAGGCCCCAGCATCCT	NA	False	NA	NA	False	AATAGA	-25	NA	27474895	27495798	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_27474914_27475581_27475732_27495679
H1_mix_00020375	chr12	+	700	3	FSM	ENSG00000165935.9	ENST00000541168.1	922	3	222	0	222	0	multi-exon	FALSE	canonical	2	6	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTTCTCACCAGTAAAC	NA	False	NA	NA	False	NA	NA	NA	27494057	27502147	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_27494357_27495679_27495856_27501922
H1_mix_00020378	chr12	+	830	1	FSM	ENSG00000174236.4	ENST00000310791.4	1150	1	291	29	291	-29	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTAAAGTTTGATTTGC	289	False	NA	NA	False	AATAAA	-24	NA	27696737	27697567	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_27696700_27697600
H1_mix_00020379	chr12	+	1728	7	FSM	ENSG00000061794.13	ENST00000538315.5	1715	7	-13	0	0	0	multi-exon	FALSE	canonical	2	25	junction_5	203.100139504301	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGCCTAATAGACTTATT	1	True	NA	NA	False	AATAAA	-16	NA	27710821	27756294	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_27710956_27714779_27714821_27716290_27716459_27719807_27719869_27724046_27724187_27737538_27737609_27755180
H1_mix_00020380	chr12	+	2618	2	FSM	ENSG00000087448.11	ENST00000543254.1	772	2	-989	-857	-170	857	multi-exon	FALSE	canonical	3	93	junction_1	0	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCTCTCAAAGTGCTGGG	-4	True	NA	NA	False	NA	NA	NA	27779877	27793000	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_27781203_27791707
H1_mix_00020381	chr12	+	1313	11	ISM	ENSG00000123106.11	ENST00000536442.6	2519	13	-30	97530	-1	-4	5prime_fragment	FALSE	canonical	3	64	junction_1	25.8203408188196	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAGAAAAATAAGTCAGGT	0	True	NA	NA	False	AAAAAG	-33	NA	28190425	28452636	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_28190642_28257201_28257246_28259363_28259443_28305648_28305807_28306741_28306946_28307644_28307750_28362437_28362516_28391303_28391412_28450160_28450254_28450349_28450419_28452477
H1_mix_00020382	chr12	+	2441	12	FSM	ENSG00000123106.11	ENST00000539107.5	2440	12	-1	0	-1	0	multi-exon	FALSE	canonical	1	6	junction_7	40.1208916951409	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTGTTACTTTTTGTT	0	True	NA	16	True	AATAAA	-18	NA	28190425	28550166	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_28190642_28257201_28257246_28259363_28259443_28305648_28305807_28306741_28306946_28307644_28307750_28362437_28362516_28450160_28450254_28450349_28450419_28452477_28452655_28484051_28484166_28549062
H1_mix_00020383	chr12	+	1305	10	FSM	ENSG00000123106.11	ENST00000545737.5	1578	10	273	0	-202	0	multi-exon	FALSE	canonical	3	101	junction_1	18.0800688297608	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAATAAGTCAGGTTAGT	NA	False	NA	NA	False	AAAAAG	-37	NA	28256997	28452640	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_28257246_28259363_28259443_28305648_28305807_28306741_28306946_28307644_28307750_28362437_28362516_28391303_28391412_28450160_28450254_28450349_28450419_28452477
H1_mix_00020385	chr12	+	376	3	FSM	ENSG00000123106.11	ENST00000535212.1	376	3	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACATGAAATTGTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	28450397	28484229	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_28450419_28452477_28452655_28484051
H1_mix_00020386	chr12	+	2135	1	FSM	ENSG00000123106.11	ENST00000624946.1	2173	1	25	13	25	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGAATAGTGAGAGAAATT	NA	False	NA	NA	False	ATTAAA	-10	NA	28579363	28581498	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_28579400_28581500
H1_mix_00020387	chr12	+	558	3	ISM	ENSG00000064763.12	ENST00000693163.1	3303	11	-50	38386	-10	-733	5prime_fragment	FALSE	canonical	1	1	junction_2	74.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTAAGTTGGTCTAATA	-14	True	NA	NA	False	NA	NA	NA	29149252	29297196	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_29149408_29270411_29270639_29297020
H1_mix_00020388	chr12	+	2134	1	FSM	ENSG00000257599.4	ENST00000641955.1	5529	1	2296	1099	1948	-1099	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCACAGGTCTATATGAGC	1950	False	NA	NA	False	NA	NA	NA	29391584	29393718	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_29391600_29393700
H1_mix_00020389	chr12	+	1449	6	FSM	ENSG00000285517.1	ENST00000649043.1	1431	6	-18	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.00399840127872	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGTATCTTGCTCTGTCA	-2	True	NA	NA	False	AATATA	-27	NA	30795964	30802321	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_30796217_30796982_30797211_30798144_30798316_30799912_30800022_30800533_30800602_30801700
H1_mix_00020390	chr12	+	1649	2	FSM	ENSG00000110900.16	ENST00000545802.1	1649	2	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTGGGCAAGAGTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	30926427	30955260	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_30926797_30953980
H1_mix_00020397	chr12	+	1379	1	FSM	ENSG00000177340.5	ENST00000313737.5	1514	1	-176	311	-176	-311	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGCAGTCAACTAAACCAC	306	False	NA	NA	False	NA	NA	NA	31324139	31325518	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_31324100_31325500
H1_mix_00020398	chr12	+	1975	1	FSM	ENSG00000276900.1	ENST00000619086.1	2088	1	102	11	102	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACACTGAAGTTTGAATT	NA	False	NA	9	True	AATAAA	-10	NA	31729218	31731193	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_31729200_31731200
H1_mix_00020399	chr12	+	6514	5	NIC	ENSG00000174718.12	novel	6234	6	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	114.2899273777	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATTTGAAACCTTCACAG	135	False	NA	5	True	AATAAA	-19	NA	31959371	31993103	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_31959901_31960776_31960872_31980877_31985958_31987238_31987323_31992377
H1_mix_00020400	chr12	+	6051	5	NIC	ENSG00000174718.12	novel	6234	6	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_2	93.5130338509023	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAAACCTTCACAGCTCA	14	False	NA	9	True	AATAAA	-23	NA	31959429	31993107	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_31959492_31960776_31960872_31980877_31985958_31987238_31987323_31992377
H1_mix_00020401	chr12	+	391	3	FSM	ENSG00000174718.12	ENST00000535606.1	391	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	70.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATACTTGGACTATTGGA	25	False	NA	NA	False	NA	NA	NA	31959662	31970246	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_31959901_31960776_31960872_31970188
H1_mix_00020402	chr12	+	3077	1	FSM	ENSG00000151746.15	ENST00000551848.1	1962	1	-221	-894	-221	884	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTATTTTAGGTAATAA	6281	False	NA	NA	False	NA	NA	NA	32106613	32109690	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_32106600_32109700
H1_mix_00020403	chr12	+	5223	8	ISM	ENSG00000151746.15	ENST00000652176.1	9419	10	-233	42913	-221	1600	5prime_fragment	FALSE	canonical	2	3	junction_7	30.7703806692509	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATCTAGTCTTGTTTTTA	6281	False	NA	7	True	NA	NA	NA	32106613	32340720	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_32107545_32216246_32216460_32293993_32294147_32305696_32306123_32327460_32328556_32334515_32334668_32337498_32337817_32338785
H1_mix_00020406	chr12	+	571	6	FSM	ENSG00000087470.19	ENST00000551076.5	556	6	-15	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	178.272824625628	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATGACCAAGGTAAGGAA	1	True	NA	NA	False	NA	NA	NA	32679300	32711003	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_32679466_32701414_32701563_32707366_32707414_32708152_32708225_32709543_32709608_32710928
H1_mix_00020408	chr12	+	1034	1	FSM	ENSG00000286950.1	ENST00000666291.1	954	1	-154	74	-154	-74	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCTTCCAGGAGGTGGCA	NA	False	NA	NA	False	NA	NA	NA	32755355	32756389	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_32755400_32756400
H1_mix_00020409	chr12	+	10050	3	FSM	ENSG00000175548.9	ENST00000308742.9	10050	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATAATGTGTTGTGTCT	-1	True	NA	NA	False	AATAAA	-17	NA	38316773	38329721	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_38317065_38318260_38318459_38320160
H1_mix_00020410	chr12	+	2916	16	FSM	ENSG00000018236.15	ENST00000547702.5	3033	16	-3	120	0	-120	multi-exon	FALSE	canonical	2	4	junction_15	32.7291918629226	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCTGGGACTGCTTAAA	-11	True	NA	NA	False	ATTAAA	-18	NA	40692438	40972315	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_40692593_40908356_40908494_40910072_40910106_40918638_40918772_40922255_40922429_40924556_40924653_40929795_40930003_40933460_40933561_40933696_40933879_40936780_40936906_40937569_40937688_40939334_40939486_40943596_40943725_40943994_40944171_40959113_40959235_40971433
H1_mix_00020414	chr12	+	1690	11	FSM	ENSG00000134283.18	ENST00000395580.7	1693	11	3	0	-1	0	multi-exon	FALSE	canonical	3	57	junction_2	165.454041957276	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTAGAGAATATTTGCTT	-16	True	NA	24	True	AATAAA	-15	NA	42326147	42441950	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_42326230_42332659_42332703_42335882_42335975_42351884_42352050_42355160_42355223_42374862_42375075_42384939_42384997_42387455_42387536_42393569_42393690_42398853_42398995_42441314
H1_mix_00020417	chr12	+	2097	1	FSM	ENSG00000274943.1	ENST00000621405.1	437	1	-771	-889	-771	889	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGAGTGATTTTTTGAAG	7	False	NA	NA	False	NA	NA	NA	42360495	42362592	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_42360500_42362600
H1_mix_00020422	chr12	+	397	1	FSM	ENSG00000278351.1	ENST00000619826.1	254	1	-140	-3	-140	3	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGTGAAAATAGATTGTTC	493	False	NA	NA	False	NA	NA	NA	45256332	45256729	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_45256300_45256700
H1_mix_00020425	chr12	+	545	4	NIC	ENSG00000257261.7	novel	2298	4	NA	NA	14	157374	combination_of_known_splicesites	FALSE	canonical	3	26	junction_3	4.78423336480244	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTCTTACTCTTTCAT	15	False	NA	8	True	AATAAA	-18	NA	46383692	46652577	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_46383714_46387746_46387973_46470152_46470263_46652389
H1_mix_00020426	chr12	+	344	1	FSM	ENSG00000257261.7	ENST00000653856.1	871	1	-337	864	103	-864	mono-exon	FALSE	NA	NA	NA	NA	NA	1737	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCCCCAGACCCACAAGAA	104	False	NA	NA	False	NA	NA	NA	46383781	46384125	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_46383800_46384100
H1_mix_00020427	chr12	+	1994	2	FSM	ENSG00000179715.13	ENST00000549630.1	732	2	-168	-1094	-168	0	multi-exon	FALSE	canonical	3	12	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTTGTGGGTTTTGCATG	1970	False	NA	14	True	AATAAA	-26	NA	47223332	47236660	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_47223673_47235006
H1_mix_00020428	chr12	+	1036	3	FSM	ENSG00000257433.7	ENST00000659426.1	1737	3	2	699	2	-2	multi-exon	FALSE	canonical	2	4	junction_2	7.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAAAATATTATTTTTATC	5	True	NA	NA	False	TTTAAA	-32	NA	47706089	47720440	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_47706164_47719146_47719273_47719604
H1_mix_00020431	chr12	+	761	5	FSM	ENSG00000211584.14	ENST00000547002.5	751	5	-10	0	-10	0	multi-exon	FALSE	canonical	1	1	junction_1	54.8059075282948	2464	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGGGCCTTAGGACCTGG	4635	False	NA	NA	False	NA	NA	NA	47758567	47780307	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_47758661_47760215_47760402_47772169_47772321_47779027_47779196_47780144
H1_mix_00020435	chr12	+	333	3	FSM	ENSG00000134291.12	ENST00000549288.5	321	3	-12	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	68.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTGGAGGAAATTCCACA	-2	True	NA	NA	False	NA	NA	NA	47963583	47968200	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_47963634_47964208_47964424_47968132
H1_mix_00020446	chr12	+	501	1	FSM	ENSG00000274124.1	ENST00000618623.1	312	1	-245	56	-245	-56	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAGCTCAATGGATTACA	NA	False	NA	NA	False	AATAAA	-16	NA	48152571	48153072	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_48152600_48153100
H1_mix_00020448	chr12	+	505	3	FSM	ENSG00000167535.8	ENST00000551716.5	544	3	0	39	0	-28	multi-exon	FALSE	canonical	3	9	junction_1	34.5	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCACCCCTCATATCTAA	9	True	NA	NA	False	NA	NA	NA	48815599	48823933	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_48815729_48823343_48823467_48823680
H1_mix_00020449	chr12	+	2887	12	NIC	ENSG00000167535.8	novel	2931	13	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_5	16.6465443265721	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGCTTCTGTTCTGTC	12	True	NA	15	True	AATAAA	-15	NA	48818519	48828941	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_48818975_48823343_48823467_48823680_48823804_48824257_48824374_48824668_48824734_48825162_48825244_48825433_48825493_48825659_48825770_48826366_48826519_48826758_48826855_48826973_48827124_48827584
H1_mix_00020453	chr12	+	1136	3	NNC	ENSG00000258017.3	novel	897	2	NA	NA	-59354	-2543	intron_retention	TRUE	non_canonical	0	0	junction_1	1618.5	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGCTGTGGAAAACCAAG	8990	False	NA	NA	False	NA	NA	NA	49068427	49185941	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_49068456_49127781_49128865_49185916
H1_mix_00020454	chr12	+	485	3	FSM	ENSG00000135451.13	ENST00000549275.5	348	3	-41	-96	-41	0	multi-exon	FALSE	canonical	1	4	junction_2	184.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGTTCCCCATGTCAC	NA	False	NA	28	True	AATAAA	-40	NA	49323194	49324392	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_49323350_49323603_49323753_49324211
H1_mix_00020456	chr12	+	282	2	FSM	ENSG00000135451.13	ENST00000549534.1	839	2	0	557	0	-488	multi-exon	FALSE	canonical	3	373	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACCTCACCTTTTTGTCC	5	True	NA	NA	False	NA	NA	NA	49323272	49323808	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_49323350_49323603
H1_mix_00020460	chr12	+	3261	14	NIC	ENSG00000123352.18	novel	3320	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_2	86.9899674552751	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTTTCATAGCAGCAA	3	True	NA	18	True	AATAAA	-27	NA	49367461	49527425	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_49367588_49387053_49387138_49460769_49461038_49484589_49484670_49489464_49489574_49490681_49490732_49494740_49495003_49496832_49497010_49500069_49500206_49514554_49514614_49519072_49519183_49522750_49522854_49524681_49524897_49525943
H1_mix_00020464	chr12	+	3336	26	NIC	ENSG00000110844.14	novel	3182	26	NA	NA	-4	0	combination_of_known_junctions	TRUE	canonical	3	38	junction_21	25.0407667614233	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGACTCTTTTCCATG	-7	True	NA	9	True	TTTAAA	-20	NA	49623409	49644665	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_49623594_49630544_49630626_49631400_49631545_49631859_49631926_49632595_49632624_49632854_49632881_49633013_49633125_49633426_49633548_49633636_49633662_49633885_49634093_49634331_49634456_49634537_49634603_49635098_49635264_49635364_49635474_49635842_49635994_49636715_49636850_49637469_49637585_49637732_49637825_49641907_49642025_49642234_49642373_49642579_49642676_49642926_49643017_49643222_49643398_49643690_49643753_49643860_49644005_49644099
H1_mix_00020466	chr12	+	774	7	FSM	ENSG00000139644.13	ENST00000550445.5	761	7	-13	0	0	0	multi-exon	TRUE	canonical	3	161	junction_1	1144.02797168601	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATGTCAGCCCTGAGCT	-4	True	NA	NA	False	NA	NA	NA	49741808	49758686	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_49742116_49752463_49752550_49752972_49753082_49755634_49755756_49758226_49758276_49758382_49758481_49758682
H1_mix_00020467	chr12	+	3377	10	FSM	ENSG00000139644.13	ENST00000423828.5	3254	10	0	-123	0	123	multi-exon	FALSE	canonical	1	43	junction_1	983.355906834434	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACCTCCCACTCTGTAG	-4	True	NA	NA	False	NA	NA	NA	49741808	49765057	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_49742281_49752463_49752550_49752972_49753082_49755634_49755756_49758226_49758276_49758382_49758481_49758682_49758763_49759220_49759322_49761703_49761780_49762872
H1_mix_00020468	chr12	+	1657	4	NNC	ENSG00000161798.7	novel	1449	4	NA	NA	-208	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	6.37704215656966	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTCCACCTCTGTCTCTCC	300	False	NA	14	True	AATAAA	-14	NA	49961663	49965681	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_49962381_49963491_49963657_49964091_49964178_49964992
H1_mix_00020469	chr12	+	1078	2	FSM	ENSG00000161798.7	ENST00000553132.1	825	2	213	-466	213	-1	multi-exon	FALSE	canonical	3	9	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTCCACCTCTGTCTCTCC	1816	False	NA	14	True	AATAAA	-14	NA	49963787	49965681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_49964176_49964991
H1_mix_00020472	chr12	+	2890	2	FSM	ENSG00000066117.15	ENST00000551352.1	621	2	-808	-1461	-808	0	multi-exon	FALSE	canonical	3	459	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACGCTTGTAGTGTTTGT	NA	False	NA	78	True	NA	NA	NA	50097686	50100707	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_50098816_50098946
H1_mix_00020476	chr12	+	1589	11	FSM	ENSG00000161813.23	ENST00000522085.5	1577	11	-12	0	0	0	multi-exon	FALSE	canonical	3	233	junction_1	69.758225321463	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGTTGGTTGCTTTTTA	5	True	NA	6	True	AATAAA	-17	NA	50400895	50461487	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_50401029_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50461134
H1_mix_00020480	chr12	+	6294	17	NNC	ENSG00000161813.23	novel	2068	10	NA	NA	244	-81	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	139.898121413406	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTTGTATTTGTATTTG	11	False	NA	19	True	CATAAA	-16	NA	50401436	50479915	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_50401480_50412404_50412454_50427764_50427910_50428934_50429091_50430497_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50461134_50461348_50462581_50462631_50466958_50467121_50473414_50473537_50473998_50474168_50475525
H1_mix_00020482	chr12	+	2633	8	FSM	ENSG00000066084.13	ENST00000549620.5	2676	8	-6	49	-6	-49	multi-exon	FALSE	canonical	3	81	junction_7	4.47213595499958	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCGACAGAGTGAGACTC	-24	True	NA	NA	False	NA	NA	NA	50504978	50680233	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_50505241_50625975_50626048_50640723_50640853_50660193_50660320_50671185_50671399_50674473_50674630_50675328_50675449_50678678
H1_mix_00020487	chr12	+	419	3	FSM	ENSG00000135503.13	ENST00000563121.1	419	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	16	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAGAAGCTGGCCTCCTG	NA	False	NA	NA	False	NA	NA	NA	51984034	51991992	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_51984167_51985191_51985349_51991862
H1_mix_00020488	chr12	+	2473	7	FSM	ENSG00000123358.20	ENST00000394825.6	2485	7	12	0	-5	0	multi-exon	FALSE	canonical	3	10	junction_1	41.1599184752459	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGATTCAGTCTGTCTCT	10	False	NA	10	True	AATAAA	-21	NA	52051453	52059503	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_52051569_52054326_52055205_52056029_52056160_52056493_52056646_52057056_52057260_52057351_52057531_52058687
H1_mix_00020489	chr12	+	839	2	FSM	ENSG00000123395.15	ENST00000552544.5	837	2	-3	1	-3	-1	multi-exon	FALSE	canonical	3	395	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGGTGTCGGGGAGTTC	-26	True	NA	NA	False	NA	NA	NA	52069972	52073902	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_52070484_52073574
H1_mix_00020491	chr12	+	2097	5	FSM	ENSG00000111057.11	ENST00000549078.5	2088	5	-9	0	0	0	multi-exon	FALSE	canonical	1	2012	junction_2	1963.04476515438	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGGAGGCCAATAAAAAGTT	-1	True	NA	-14	True	NA	NA	NA	52949117	52952872	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_52949591_52950327_52950907_52951480_52951646_52951730_52951857_52952118
H1_mix_00020492	chr12	+	607	6	FSM	ENSG00000063046.18	ENST00000549645.5	590	6	-17	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	625.165130185617	1761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGCTGATCAAGCACAGGA	-9	True	NA	NA	False	NA	NA	NA	53006430	53021835	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53006497_53008596_53008644_53016472_53016611_53018797_53019007_53019909_53020027_53021805
H1_mix_00020493	chr12	+	885	7	FSM	ENSG00000063046.18	ENST00000549077.5	885	7	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	513.066813929293	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGATCGATATGGTGGC	-9	True	NA	NA	False	NA	NA	NA	53006430	53027856	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53006497_53016472_53016611_53018797_53019007_53019909_53020027_53021715_53021861_53022492_53022628_53027781
H1_mix_00020496	chr12	+	479	1	FSM	ENSG00000283536.2	ENST00000635789.1	835	1	346	10	346	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	539	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTGAAGGTGAGCAAGTT	334	False	NA	NA	False	NA	NA	NA	53242234	53242713	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53242200_53242700
H1_mix_00020499	chr12	+	613	5	FSM	ENSG00000123349.15	ENST00000550880.5	595	5	-18	0	1	0	multi-exon	FALSE	canonical	3	17	junction_1	1695.89040035021	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAATGTTGGTCTTTTCTT	2813	False	NA	26	True	AATAAA	-14	NA	53295506	53299445	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53295640_53296429_53296552_53297849_53297925_53298044_53298151_53299268
H1_mix_00020500	chr12	+	2299	11	FSM	ENSG00000288663.1	ENST00000676632.1	2281	11	-18	0	0	0	multi-exon	FALSE	canonical	2	14	junction_7	1553.53524581839	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCTCATACCTCCCACAAAT	2813	False	NA	-36	True	NA	NA	NA	53295506	53307122	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53295640_53295838_53296276_53297849_53297925_53298044_53298151_53299268_53299954_53300149_53300263_53303033_53303173_53305907_53306061_53306201_53306321_53306679_53306862_53306965
H1_mix_00020502	chr12	+	598	2	FSM	ENSG00000135409.11	ENST00000553037.1	608	2	10	0	10	0	multi-exon	FALSE	canonical	1	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCAGTGCTCTCCAGCCTG	428	False	NA	NA	False	NA	NA	NA	53424287	53425123	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53424471_53424708
H1_mix_00020508	chr12	+	1373	14	NIC	ENSG00000197111.16	novel	3159	15	NA	NA	12	-184	combination_of_known_junctions	FALSE	canonical	3	54	junction_9	246.300461144033	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAGCAGCTAGAACAATGC	11	False	NA	NA	False	NA	NA	NA	53452113	53479430	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_53452377_53454725_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462492_53462568_53464759_53464853_53467220_53467294_53467804_53467844_53468776_53468833_53471637_53471808_53479405
H1_mix_00020509	chr12	+	1502	14	NIC	ENSG00000197111.16	novel	1342	15	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	160	junction_11	236.824180158387	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTCAGCTGTTGATG	12	False	NA	35	True	ATTAAA	-16	NA	53452114	53479614	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_53452377_53454725_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462492_53462568_53465931_53465974_53467220_53467294_53467804_53467844_53468779_53468833_53471637_53471808_53479405
H1_mix_00020513	chr12	+	859	8	NNC	ENSG00000197111.16	novel	1814	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	343.303281162798	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTCAGCTGTTGATG	853	False	NA	35	True	ATTAAA	-16	NA	53461014	53479614	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_53461143_53462479_53462568_53464759_53464853_53465931_53465974_53467220_53467294_53468776_53468833_53471637_53471808_53479405
H1_mix_00020516	chr12	+	344	2	FSM	ENSG00000250742.5	ENST00000508564.1	1369	2	246	779	131	-779	multi-exon	FALSE	canonical	2	2	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGAGCAGCTGCAGACTG	117	False	NA	NA	False	NA	NA	NA	54126343	54132064	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_54126613_54131989
H1_mix_00020517	chr12	+	2793	10	FSM	ENSG00000135486.19	ENST00000677210.1	2793	10	0	0	0	0	multi-exon	FALSE	canonical	3	1604	junction_8	5291.58813473368	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGGAAGTTTGGGGAG	NA	False	NA	135	True	NA	NA	NA	54280662	54285842	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572_54282666_54282799_54282875_54283078_54283235_54283811_54283968_54284257
H1_mix_00020523	chr12	+	986	8	FSM	ENSG00000111481.10	ENST00000551779.5	1462	8	-20	496	0	-229	multi-exon	FALSE	canonical	3	731	junction_1	181.031511520136	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCTACCCACTTGGAAT	-6	True	NA	NA	False	NA	NA	NA	54325130	54350125	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_54325182_54340546_54340616_54342205_54342288_54343224_54343317_54345459_54345516_54347766_54347845_54347999_54348052_54349619
H1_mix_00020527	chr12	+	2079	9	FSM	ENSG00000111481.10	ENST00000548753.1	778	9	-133	-1168	-133	8	multi-exon	FALSE	canonical	2	4	junction_1	406.649092431054	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGATGTTTCTGTTTCTC	314	False	NA	22	True	AATAAA	-23	NA	54325450	54351854	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_54325683_54340546_54340616_54342205_54342288_54343224_54343317_54345459_54345516_54347766_54347845_54347999_54348052_54349619_54349659_54350475
H1_mix_00020530	chr12	+	3382	4	FSM	ENSG00000258311.5	ENST00000550412.5	3382	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	456.657420830977	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCTGACCCCATTTAAGT	-20	True	NA	10	True	AATAAA	-30	NA	55716035	55724703	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_55716197_55716932_55717006_55719090_55719224_55721688
H1_mix_00020532	chr12	+	976	2	FSM	ENSG00000135437.10	ENST00000551444.1	976	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCCTGGTGCCTGCCAC	2148	False	NA	-79	True	NA	NA	NA	55723366	55724614	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_55724050_55724321
H1_mix_00020533	chr12	+	3133	4	NIC	ENSG00000182796.15	novel	2924	5	NA	NA	186	0	intron_retention	FALSE	canonical	3	18	junction_1	29.9481032602883	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGGGAGTCCAGCCTCT	2	True	NA	3	True	AATAAA	-17	NA	55829793	55836244	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_55829826_55829959_55831084_55832958_55833542_55834850
H1_mix_00020534	chr12	+	585	2	FSM	ENSG00000182796.15	ENST00000636790.1	572	2	-13	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTACTGTGCCACAAGGTG	-9	True	NA	NA	False	NA	NA	NA	55830827	55833021	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_55831350_55832958
H1_mix_00020537	chr12	+	619	5	NIC	ENSG00000182796.15	novel	884	5	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_3	27.225906780124	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTACCCCTGTGAGGGCC	14	True	NA	NA	False	NA	NA	NA	55830889	55835007	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_55831084_55831256_55831350_55832958_55833039_55833446_55833542_55834850
H1_mix_00020551	chr12	+	3320	6	FSM	ENSG00000111540.16	ENST00000553116.5	3322	6	2	0	2	0	multi-exon	FALSE	canonical	1	2	junction_1	201.727539022316	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCATTGGAGTGTTGCTTT	52	False	NA	8	True	AGTAAA	-19	NA	55973914	55994706	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_55974001_55986868_55987124_55989946_55990099_55990681_55990805_55991359_55991454_55992096
H1_mix_00020558	chr12	+	5030	9	NIC	ENSG00000123411.15	novel	5229	12	NA	NA	-143	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_3	10.6117564521619	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTGTTTTTGCAGACT	13	True	NA	12	True	AATAAA	-19	NA	56007515	56038435	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_56007735_56011416_56011495_56018125_56018178_56025053_56025159_56026780_56027042_56027779_56027948_56032560_56032711_56033189_56033322_56034570
H1_mix_00020559	chr12	+	5310	8	FSM	ENSG00000123411.15	ENST00000547167.6	5313	8	3	0	-2	0	multi-exon	FALSE	canonical	2	4	junction_1	12.6232697339283	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTGTTTTTGCAGACT	14	True	NA	12	True	AATAAA	-19	NA	56021045	56038435	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56021581_56023670_56023765_56025053_56025159_56026780_56027042_56027779_56027948_56032560_56032711_56033189_56033322_56034570
H1_mix_00020561	chr12	+	711	4	FSM	ENSG00000065361.17	ENST00000546884.1	660	4	-67	16	0	-16	multi-exon	FALSE	canonical	3	97	junction_1	8.01387685344754	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGGCCGTGATCAAGA	5	True	NA	NA	False	NA	NA	NA	56080136	56086656	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56080383_56083750_56083903_56084994_56085182_56086530
H1_mix_00020562	chr12	+	2446	5	FSM	ENSG00000065361.17	ENST00000682873.1	2446	5	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	15.0228991875736	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTTTAAAAAAAAAAAAAAAA	5323	False	NA	NA	False	NA	NA	NA	56099138	56102802	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56099746_56099837_56100030_56100173_56100246_56101060_56101362_56101528
H1_mix_00020568	chr12	+	562	2	FSM	ENSG00000196465.10	ENST00000551834.5	562	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCCAGCCAAGACCAAAGC	-7	True	NA	NA	False	GGGGCT	-1	NA	56152589	56154005	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56152632_56153485
H1_mix_00020569	chr12	+	322	3	FSM	ENSG00000196465.10	ENST00000550550.5	322	3	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_2	80.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTTTCAGACTGCTAT	2553	False	NA	18	True	AATAAA	-14	NA	56157356	56157976	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56157546_56157697_56157736_56157881
H1_mix_00020572	chr12	+	1323	6	FSM	ENSG00000092841.19	ENST00000548293.5	753	6	-50	-520	0	0	multi-exon	FALSE	canonical	3	332	junction_5	5412.1820738035	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTAGCCTAAAGTTTCCC	-16	True	NA	-84	True	NA	NA	NA	56158345	56161465	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56158405_56158683_56158712_56159586_56159731_56159974_56160149_56160242_56160321_56160625
H1_mix_00020574	chr12	+	674	6	FSM	ENSG00000092841.19	ENST00000293422.9	664	6	-10	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	5664.91233471446	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCGGTTCGGTTCTTTCT	-16	True	NA	25	True	AATAAA	-14	NA	56158345	56161574	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56158405_56158680_56158712_56159586_56159731_56159974_56160149_56160242_56160321_56161386
H1_mix_00020575	chr12	+	732	7	FSM	ENSG00000092841.19	ENST00000348108.8	722	7	-10	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	6959.82416963404	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCTTTCCTGAACAGGG	-16	True	NA	38	True	AATAAA	-27	NA	56158345	56161587	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56158405_56158680_56158712_56159586_56159731_56159974_56160149_56160242_56160321_56160625_56160671_56161386
H1_mix_00020576	chr12	+	582	7	FSM	ENSG00000092841.19	ENST00000548400.5	573	7	-9	0	0	0	multi-exon	FALSE	canonical	3	196	junction_3	6635.28016866407	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCGGTTCGGTTCTTTCTT	11	True	NA	26	True	AATAAA	-15	NA	56158372	56161575	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56158405_56158683_56158712_56159586_56159623_56159974_56160149_56160242_56160321_56160625_56160671_56161386
H1_mix_00020580	chr12	+	1844	4	FSM	ENSG00000135469.14	ENST00000551911.5	1332	4	-17	-495	-16	0	multi-exon	FALSE	canonical	3	71	junction_1	27.3901847788988	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGGCTTTATTATATTG	2	True	NA	NA	False	AATAAA	-14	NA	56266873	56270964	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56267253_56267793_56267941_56269058_56269562_56270149
H1_mix_00020584	chr12	+	10750	2	FSM	ENSG00000176422.14	ENST00000338146.7	10769	2	0	19	0	-19	multi-exon	FALSE	canonical	3	221	junction_1	0	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACAATTCCCAAATTCCT	3	True	NA	NA	False	AATAAA	-20	NA	56468577	56479689	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56468677_56469038
H1_mix_00020585	chr12	+	1522	6	FSM	ENSG00000025423.11	ENST00000554150.5	1547	6	25	0	-9	0	multi-exon	FALSE	canonical	2	2	junction_1	7.39188744503053	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAATCATTTGTTCTTGC	NA	False	NA	NA	False	NA	NA	NA	56752477	56787576	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56752582_56763203_56763415_56773833_56774166_56781973_56782233_56784852_56785017_56787124
H1_mix_00020588	chr12	+	1670	7	FSM	ENSG00000123384.14	ENST00000553277.5	1693	7	10	13	10	-13	multi-exon	FALSE	canonical	2	4	junction_6	9.59890039998795	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGGATCAATACATGTGT	0	True	NA	NA	False	AATAAA	-9	NA	57128502	57150046	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57129032_57138458_57138582_57141373_57141512_57143678_57143799_57144971_57145101_57145226_57145491_57149679
H1_mix_00020590	chr12	+	5114	17	FSM	ENSG00000123384.14	ENST00000556356.1	5114	17	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	42.3008200275125	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4359	False	NA	NA	False	AATAAA	-6	NA	57203617	57213340	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57204530_57204626_57205250_57205350_57205486_57205557_57205678_57206472_57206742_57208037_57208818_57209082_57209200_57209691_57209869_57210028_57210170_57210306_57210481_57210717_57210880_57211175_57211351_57211486_57211589_57211749_57211815_57211926_57212018_57212116_57212262_57212414
H1_mix_00020592	chr12	+	837	6	FSM	ENSG00000182199.11	ENST00000554600.5	837	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	438.352552176898	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTTGGTGGGGGGGGCTG	3533	False	NA	NA	False	NA	NA	NA	57229683	57232572	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57229812_57230802_57231001_57231480_57231561_57231712_57231914_57232210_57232293_57232424
H1_mix_00020593	chr12	+	1918	12	FSM	ENSG00000182199.11	ENST00000557487.5	1918	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	338.11186959886	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTTTCCATTACTGTG	-11	True	NA	34	True	AATAAA	-13	NA	57229710	57234726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57229812_57230802_57231001_57231480_57231561_57231712_57231914_57232210_57232293_57232482_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
H1_mix_00020594	chr12	+	2176	12	FSM	ENSG00000182199.11	ENST00000553837.5	2152	12	-24	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	448.794804849058	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTTTCCATTACTGTG	4	True	NA	34	True	AATAAA	-13	NA	57230359	57234726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57230661_57230802_57231001_57231480_57231561_57231712_57231914_57232210_57232293_57232424_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
H1_mix_00020596	chr12	+	750	4	FSM	ENSG00000166986.15	ENST00000551842.5	662	4	-68	-20	-24	20	multi-exon	FALSE	canonical	3	1595	junction_2	81.9769615332395	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAAAGTGCTCAGTAAAT	7967	False	NA	NA	False	TATAAA	-22	NA	57487999	57489803	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57488200_57489018_57489110_57489266_57489346_57489423
H1_mix_00020600	chr12	+	2780	21	NNC	ENSG00000166986.15	novel	2797	21	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	2	130	junction_6	348.133149814837	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTGAGACCTTTCCTTT	8	True	NA	18	True	AATAAA	-22	NA	57488081	57516652	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_57488200_57489018_57489110_57489266_57489346_57489423_57489559_57489895_57489972_57490206_57490380_57490540_57490645_57498156_57498274_57498419_57498624_57500320_57500523_57504224_57504300_57511697_57511869_57512007_57512104_57512235_57512354_57512750_57512965_57514719_57514852_57514953_57515059_57515149_57515337_57515919_57515992_57516244_57516338_57516434
H1_mix_00020606	chr12	+	7033	28	NIC	ENSG00000155980.13	novel	5779	29	NA	NA	-6	0	intron_retention	FALSE	canonical	1	3	junction_27	8.37692303332034	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTTGTAAATATTCTTT	-21	True	NA	17	True	AATAAA	-22	NA	57550037	57586633	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_57550401_57563438_57563527_57563619_57563694_57564107_57564213_57564459_57564509_57564917_57564974_57567125_57567214_57567493_57567619_57568962_57569068_57569255_57569405_57569534_57569684_57569986_57570163_57571320_57571390_57572060_57572268_57572579_57572727_57575083_57575273_57575639_57575758_57576086_57576152_57576268_57576379_57576760_57576863_57577712_57577774_57578008_57578081_57578237_57578343_57580955_57581173_57581414_57581569_57581869_57581953_57582601_57582630_57582854
H1_mix_00020607	chr12	+	3286	15	FSM	ENSG00000155980.13	ENST00000675929.1	3286	15	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_14	8.48407872645785	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAGTGCACTTTAAAGAA	2567	False	NA	NA	False	NA	NA	NA	57572140	57585339	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57572268_57572579_57572727_57575083_57575273_57575639_57575758_57576086_57576152_57576268_57576379_57576760_57576863_57577712_57577774_57578008_57578081_57578237_57578343_57580955_57581173_57581414_57581569_57581869_57581953_57582601_57583216_57584217
H1_mix_00020608	chr12	+	1143	2	FSM	ENSG00000155980.13	ENST00000675433.1	1143	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTTGTAAATATTCTTT	1977	False	NA	17	True	AATAAA	-22	NA	57583100	57586633	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57583216_57585605
H1_mix_00020610	chr12	+	403	3	FSM	ENSG00000166908.18	ENST00000548264.1	403	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	77.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCCAGAGGGTATCGGAG	3193	False	NA	NA	False	NA	NA	NA	57599089	57600977	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57599212_57600323_57600438_57600810
H1_mix_00020611	chr12	+	2993	6	NIC	ENSG00000178498.16	novel	2067	6	NA	NA	-53	0	intron_retention	FALSE	canonical	3	74	junction_1	23.6693895147298	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGCCACACCCGTTCTT	1599	False	NA	17	True	AATAAA	-23	NA	57604568	57609800	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_57605732_57606189_57606253_57606442_57606519_57606864_57607614_57608519_57608738_57609076
H1_mix_00020613	chr12	+	715	5	FSM	ENSG00000135502.19	ENST00000474791.5	715	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2.1650635094611	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTCTCAGAGTCTGACACC	4505	False	NA	NA	False	NA	NA	NA	57624265	57625549	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57624607_57624865_57624983_57625122_57625157_57625235_57625319_57625409
H1_mix_00020617	chr12	+	2685	15	NIC	ENSG00000135506.16	novel	2682	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	205.386805311145	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCAACCTTTTTTGTGG	-10	True	NA	25	True	AATAAA	-16	NA	57694131	57721557	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_57694324_57694749_57694927_57695779_57695844_57695961_57696039_57696274_57696374_57715759_57715971_57716088_57716194_57716411_57716513_57716692_57716745_57717869_57717959_57718145_57718422_57718992_57719183_57720098_57720264_57720405_57720519_57720783
H1_mix_00020618	chr12	+	3434	4	FSM	ENSG00000135452.10	ENST00000547992.5	3434	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	66.7199786837163	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGGGATATGAAGTTCCT	-25	True	NA	NA	False	AATAAA	-45	NA	57745022	57750211	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57745218_57745744_57745874_57747017_57747132_57747215
H1_mix_00020621	chr12	+	892	2	FSM	ENSG00000135452.10	ENST00000546922.1	892	2	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGTCTCCCAAGTAGCT	1619	False	NA	NA	False	NA	NA	NA	57746666	57747855	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57746721_57747017
H1_mix_00020622	chr12	+	2246	7	FSM	ENSG00000257921.6	ENST00000651284.1	2246	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	170.672607318482	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACATAAAGTTATTAAACAT	1	True	NA	-17	True	AAAACA	-25	NA	57772659	57797554	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57772902_57773016_57773129_57783109_57783284_57786162_57786292_57787039_57787163_57792985_57793074_57796176
H1_mix_00020623	chr12	+	2739	1	NIC	ENSG00000123427.17	novel	2687	3	NA	NA	7110	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTTACCCACATTTCT	1478	False	NA	-3	True	AATAAA	-4	NA	57779787	57782526	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_57779800_57782500
H1_mix_00020626	chr12	+	638	1	FSM	ENSG00000270039.1	ENST00000602802.1	578	1	-184	124	-184	-124	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCAGCGCGCTGCTCATC	NA	False	NA	NA	False	NA	NA	NA	57803653	57804291	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57803700_57804300
H1_mix_00020627	chr12	+	399	1	FSM	ENSG00000269903.1	ENST00000602327.1	433	1	16	18	16	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTGCAAATCTGGTAACC	NA	False	NA	NA	False	GATAAA	-9	NA	57814509	57814908	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57814500_57814900
H1_mix_00020628	chr12	+	557	3	FSM	ENSG00000166896.9	ENST00000551997.1	557	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	56	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGCTCAGAGGTGAGTTTT	5	True	NA	NA	False	NA	NA	NA	57941540	57951884	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57941889_57946994_57947077_57951757
H1_mix_00020629	chr12	+	917	2	Intergenic	novelGene_312	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGGAGATAGGGGTGGGG	4892	False	NA	NA	False	NA	NA	NA	59327650	59328609	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_59327822_59327863
H1_mix_00020630	chr12	+	1533	6	FSM	ENSG00000118596.12	ENST00000547379.6	11936	6	39	10364	1	-71	multi-exon	FALSE	canonical	1	1	junction_5	2.49799919935936	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTGGTAGCAGCAAGCG	16	True	NA	NA	False	TATAAA	-24	NA	59596067	59779477	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_59596237_59655151_59655251_59704771_59705019_59771218_59771363_59774656_59775476_59779422
H1_mix_00020631	chr12	+	648	4	FSM	ENSG00000135655.16	ENST00000548524.5	648	4	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_3	10.2089285540757	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTCTTGTATGCTTTTG	5	True	NA	NA	False	NA	NA	NA	62260398	62315073	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_62260504_62294178_62294307_62302789_62302921_62314789
H1_mix_00020635	chr12	+	491	1	FSM	ENSG00000275180.1	ENST00000619323.1	491	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGAATGGTTTTGTTT	182	False	NA	13	True	AATAAA	-15	NA	62603908	62604399	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_62603900_62604400
H1_mix_00020637	chr12	+	877	3	FSM	ENSG00000118600.13	ENST00000536219.5	864	3	-13	0	-4	0	multi-exon	FALSE	canonical	3	85	junction_2	0.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGGAGGAATAATATGTAAA	NA	False	NA	NA	False	AAAACA	-10	NA	63779828	63785389	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_63780130_63781018_63781175_63784969
H1_mix_00020638	chr12	+	1706	1	FSM	ENSG00000255642.1	ENST00000539977.1	1875	1	252	-83	252	83	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAATAAACATTGCAA	312	False	NA	NA	False	AAGAAA	-33	NA	63822272	63823978	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_63822300_63824000
H1_mix_00020639	chr12	+	992	6	FSM	ENSG00000184575.12	ENST00000400935.2	984	6	-8	0	-8	0	multi-exon	FALSE	canonical	3	1205	junction_4	71.8119767169795	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCAGTGCCTTGAAGTAG	4499	False	NA	NA	False	NA	NA	NA	64409648	64420185	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_64410096_64414906_64414990_64416697_64416755_64418045_64418116_64418875_64419095_64420069
H1_mix_00020640	chr12	+	1319	8	FSM	ENSG00000184575.12	ENST00000542958.5	1321	8	2	0	2	0	multi-exon	FALSE	canonical	3	1130	junction_1	52.3606021075123	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACAGATGTTCATGCCCCT	2970	False	NA	NA	False	NA	NA	NA	64423181	64433434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_64423245_64424598_64424724_64425037_64425458_64425814_64425910_64428050_64428121_64430048_64430288_64431537_64431824_64433413
H1_mix_00020643	chr12	+	3094	22	FSM	ENSG00000183735.11	ENST00000652537.1	3092	22	-2	0	0	0	multi-exon	FALSE	canonical	2	9	junction_16	63.7491185302094	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATATTTCTTTAATTCTG	-37	True	NA	-51	True	ATTAAA	-30	NA	64452089	64502048	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_64452188_64455839_64455958_64460188_64460330_64464333_64464464_64466900_64467083_64474229_64474391_64480011_64480123_64481841_64482022_64484302_64484500_64485454_64485514_64485925_64486018_64488486_64488589_64490040_64490120_64495482_64495605_64495698_64495776_64495981_64496090_64496366_64496407_64496948_64497051_64497162_64497260_64497647_64497755_64497967_64498040_64501329
H1_mix_00020645	chr12	+	3204	20	FSM	ENSG00000183735.11	ENST00000676654.1	3204	20	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_7	19.8491541297757	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTTAATTCTGCTTAC	-37	True	NA	-46	True	ATTAAA	-35	NA	64452089	64502053	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_64452188_64455839_64455958_64460188_64460330_64464333_64464464_64466900_64467083_64474229_64474391_64480011_64480123_64481841_64482022_64484302_64484500_64485454_64485514_64485925_64486018_64488486_64488589_64490040_64490120_64495482_64495605_64495698_64495776_64496366_64496407_64496948_64497051_64497162_64497260_64497647_64498040_64501329
H1_mix_00020648	chr12	+	7732	13	FSM	ENSG00000111490.15	ENST00000542120.6	8312	13	0	580	0	-580	multi-exon	FALSE	canonical	2	14	junction_6	6.92619825172672	1034	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGCCCTCTTCCTGGTTT	19	True	NA	NA	False	NA	NA	NA	64780515	64880452	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_64781287_64785880_64786046_64827834_64827897_64828443_64828510_64830376_64830503_64832118_64832305_64836489_64836659_64838682_64838852_64843379_64843486_64864667_64864781_64866763_64866904_64870601_64870809_64875000
H1_mix_00020649	chr12	+	1934	1	FSM	ENSG00000276853.1	ENST00000621847.1	656	1	-1704	426	-1704	-426	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTCCAAATTGAGTTG	-14	True	NA	NA	False	TATAAA	-6	NA	65169557	65171491	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_65169600_65171500
H1_mix_00020651	chr12	+	3167	12	FSM	ENSG00000127311.10	ENST00000440906.6	3167	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	3.14655787270487	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCGTAACGTCAAAGTACCAA	6	True	NA	NA	False	AATGAA	-3	NA	66302578	66338158	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_66302791_66304730_66305151_66306344_66306515_66309705_66310609_66315241_66315384_66318637_66318793_66321947_66322030_66322723_66322784_66323982_66324212_66324982_66325127_66331153_66331646_66338000
H1_mix_00020652	chr12	+	694	3	FSM	ENSG00000111530.13	ENST00000539434.1	772	3	0	78	0	-78	multi-exon	FALSE	canonical	3	822	junction_1	29	160	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTAGTTCACTGTTTC	41	False	NA	NA	False	NA	NA	NA	67269725	67293111	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_67269786_67281909_67282054_67292621
H1_mix_00020653	chr12	+	473	1	Intergenic	novelGene_318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCACCTGGGTGCAGGCG	NA	False	NA	NA	False	NA	NA	NA	67771482	67771955	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_67771500_67772000
H1_mix_00020654	chr12	+	1162	1	FSM	ENSG00000256075.1	ENST00000216407.4	1162	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAATTTACTCTAAGATTT	NA	False	NA	NA	False	NA	NA	NA	68473740	68474902	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_68473700_68474900
H1_mix_00020657	chr12	+	322	3	FSM	ENSG00000111581.10	ENST00000540453.5	573	3	-3	254	-3	-254	multi-exon	FALSE	canonical	3	1013	junction_2	4.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAATTATAATAGCAACTAA	-24	True	NA	NA	False	TTTAAA	-17	NA	68686967	68689656	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_68687074_68688961_68689054_68689532
H1_mix_00020659	chr12	+	2852	26	FSM	ENSG00000111581.10	ENST00000378905.6	2859	26	7	0	7	0	multi-exon	TRUE	canonical	1	3	junction_20	195.292781228595	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTTGTCTCTTTTTCATG	-34	True	NA	29	True	AATAAA	-40	NA	68686957	68742692	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_68687074_68688961_68689054_68689532_68689620_68690630_68690747_68691967_68692113_68696818_68696923_68700725_68700854_68702735_68702785_68709237_68709310_68710004_68710094_68713729_68713809_68715626_68715741_68719340_68719432_68719577_68719655_68721117_68721178_68721840_68721987_68722103_68722153_68725726_68725797_68726498_68726618_68727350_68727390_68732636_68732740_68733451_68733613_68734707_68734834_68735230_68735345_68741812_68741981_68742354
H1_mix_00020663	chr12	+	5653	12	Fusion	ENSG00000135679.27_ENSG00000256664.1	novel	1683	12	NA	NA	-7	0	intron_retention	TRUE	canonical	3	24	junction_8	27.9610118167813	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAATTATTTGATCTTAAA	-12	True	NA	27	True	AATAAA	-23	NA	68808183	68844190	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr12_+_68808492_68809207_68809293_68813553_68813629_68816811_68816946_68820324_68820375_68824362_68824431_68824554_68824652_68828770_68828932_68835828_68835985_68836671_68836750_68839273_68843265_68843740
H1_mix_00020667	chr12	+	2120	10	NNC	ENSG00000111605.18	novel	2229	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	264	junction_8	283.357646015694	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGTGTAAAGCTGTTCA	15	False	NA	34	True	AATAAA	-14	NA	69239616	69269939	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_69239707_69251128_69251339_69253050_69253155_69256696_69256843_69257731_69257906_69258589_69259095_69259427_69259544_69260043_69260198_69262369_69262563_69269511
H1_mix_00020669	chr12	+	999	1	FSM	ENSG00000257818.1	ENST00000548895.1	1089	1	-36	126	-36	-126	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCATTTATCATCGTCGT	1944	False	NA	NA	False	NA	NA	NA	69284360	69285359	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_69284400_69285400
H1_mix_00020671	chr12	+	229	1	FSM	ENSG00000241765.2	ENST00000471748.2	340	1	-158	269	-158	-269	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCACCCAATGTGTGCC	NA	False	NA	NA	False	AAAAAG	-33	NA	69422497	69422726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_69422500_69422700
H1_mix_00020672	chr12	+	6251	10	NIC	ENSG00000166225.9	novel	6768	9	NA	NA	3	-599	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	70.5603672899934	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGTGTGGCTTTTTGGA	-15	True	NA	19	True	AATAAA	-20	NA	69470390	69579183	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_69470531_69486201_69486298_69530864_69530961_69532013_69532057_69562179_69562275_69569004_69569097_69570330_69570518_69571275_69571435_69572117_69572282_69574004
H1_mix_00020673	chr12	+	431	5	FSM	ENSG00000166226.13	ENST00000546859.5	595	5	-2	166	-2	-166	multi-exon	FALSE	canonical	3	2318	junction_4	44.51404272811	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGAGCAACTAAGCAACT	69	False	NA	NA	False	NA	NA	NA	69585423	69588006	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_69585525_69586269_69586345_69586752_69586819_69587504_69587617_69587929
H1_mix_00020674	chr12	+	573	4	FSM	ENSG00000166226.13	ENST00000551899.5	572	4	-1	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	1130.23842125849	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAGACAAGTATGTTCT	7	True	NA	NA	False	ATTAAA	-30	NA	69585458	69586925	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_69585525_69585750_69586010_69586269_69586345_69586752
H1_mix_00020678	chr12	+	2153	16	FSM	ENSG00000166226.13	ENST00000543146.2	2189	16	36	0	36	0	multi-exon	TRUE	canonical	3	19	junction_1	623.859777692249	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTACTTGGTTCTTATGTC	15	False	NA	24	True	AATAAA	-10	NA	69585701	69601565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_69586010_69586269_69586345_69586752_69586819_69587504_69587617_69587929_69588007_69588149_69588263_69589484_69589688_69592058_69592160_69592975_69593104_69593509_69593614_69597155_69597276_69597637_69597767_69597967_69598072_69598321_69598422_69599862_69600005_69601294
H1_mix_00020680	chr12	+	1761	10	FSM	ENSG00000127328.22	ENST00000483530.6	1755	10	-6	0	-4	0	multi-exon	FALSE	canonical	3	12	junction_8	37.0798271334551	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTGTACATTTTCTCT	-24	True	NA	2	True	AATAAA	-15	NA	69738855	69815723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_69739032_69755383_69755660_69756404_69756664_69784719_69784816_69794436_69794515_69795140_69795345_69800208_69800338_69801608_69801722_69812963_69813034_69815363
H1_mix_00020683	chr12	+	2861	9	FSM	ENSG00000127328.22	ENST00000551641.5	2840	9	-21	0	-21	0	multi-exon	FALSE	canonical	3	15	junction_1	38.4283017449379	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGATAAATAAAAAGT	NA	False	NA	NA	False	AAAAAG	-15	NA	69778928	69817181	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_69779182_69784719_69784816_69794436_69794515_69795140_69795345_69800208_69800338_69801608_69801722_69812777_69812878_69812963_69813034_69815363
H1_mix_00020685	chr12	+	6429	3	FSM	ENSG00000127328.22	ENST00000552610.1	558	3	-2955	-2916	-2289	1223	multi-exon	FALSE	canonical	3	128	junction_1	7.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGGGTGATTATTACAT	NA	False	NA	NA	False	AATAAA	-39	NA	69809755	69818600	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_69812878_69812963_69813034_69815363
H1_mix_00020687	chr12	+	783	7	FSM	ENSG00000111596.14	ENST00000552319.5	783	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	199.054152319301	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGAACAGGTAAGATGTT	253	False	NA	NA	False	NA	NA	NA	70243409	70330459	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_70243481_70278131_70278275_70294236_70294295_70310894_70311018_70319297_70319365_70329422_70329571_70330286
H1_mix_00020691	chr12	+	2477	6	FSM	ENSG00000111596.14	ENST00000549750.5	1085	6	6	-1398	3	148	multi-exon	FALSE	canonical	3	14	junction_1	191.70978065816	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAAGTGCCTTTTATCAG	5	True	NA	NA	False	NA	NA	NA	70243753	70331846	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_70244190_70278131_70278275_70310894_70311018_70319297_70319365_70329422_70329571_70330286
H1_mix_00020696	chr12	+	2360	6	FSM	ENSG00000111596.14	ENST00000552599.5	2360	6	0	0	0	0	multi-exon	FALSE	canonical	3	474	junction_1	41.5567082430743	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATTTTATGTGTAATT	NA	False	NA	NA	False	AATAAA	-22	NA	70337482	70346066	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_70337514_70338442_70338564_70338665_70338823_70342106_70342169_70342257_70342308_70344127
H1_mix_00020707	chr12	+	1999	16	FSM	ENSG00000121749.16	ENST00000462788.6	1995	16	-4	0	-4	0	multi-exon	FALSE	canonical	2	4	junction_4	32.7162888414251	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATTATTTTTGTAGTTAC	-12	True	NA	12	True	ATTAAA	-19	NA	71839754	71923362	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_71839812_71872069_71872169_71872928_71873004_71880468_71880608_71893221_71893325_71894685_71894884_71895946_71896076_71896676_71896781_71897846_71897942_71907021_71907139_71913825_71913927_71917697_71917798_71918450_71918549_71920730_71920848_71921367_71921455_71922982
H1_mix_00020709	chr12	+	653	1	FSM	ENSG00000258091.1	ENST00000547483.1	255	1	10	-408	10	408	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAGGCACAGTGGTTTAC	NA	False	NA	NA	False	AATAAA	-10	NA	75926222	75926875	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_75926200_75926900
H1_mix_00020710	chr12	+	1146	9	FSM	ENSG00000186908.15	ENST00000546778.5	1146	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	30.0749064836451	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGTTTGGGCTACAGTA	109	False	NA	NA	False	ATTAAA	-14	NA	76764102	76827016	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_76764330_76805316_76805440_76809042_76809121_76809712_76809858_76815145_76815211_76815856_76816020_76821057_76821168_76822405_76822532_76826907
H1_mix_00020711	chr12	+	4236	16	NIC	ENSG00000186908.15	novel	4732	17	NA	NA	-16	-225	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	20.774557088473	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTGATATTAATGGGCG	-3	True	NA	NA	False	NA	NA	NA	76764281	76853471	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_76764330_76805316_76805440_76809042_76809121_76809712_76809858_76815145_76815211_76815856_76816020_76822405_76822532_76826907_76827051_76828389_76828491_76841981_76842107_76842918_76842982_76845708_76845803_76846595_76846680_76848232_76848391_76849375_76849471_76850846
H1_mix_00020712	chr12	+	2078	3	FSM	ENSG00000186908.15	ENST00000552693.5	2078	3	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_2	8.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTTCCACTTCATGTGG	NA	False	NA	NA	False	NA	NA	NA	76843913	76848337	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_76845803_76846595_76846680_76848232
H1_mix_00020714	chr12	+	810	3	FSM	ENSG00000257474.5	ENST00000548359.1	816	3	6	0	6	0	multi-exon	FALSE	canonical	3	10	junction_1	6	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCTTTTTAGACCATATA	NA	False	NA	NA	False	NA	NA	NA	79540208	79546554	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_79540447_79542308_79542392_79546065
H1_mix_00020715	chr12	+	1931	4	NNC	ENSG00000257474.5	novel	816	3	NA	NA	12	10	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	7.1336448530109	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGTATAATTGATGTGG	NA	False	NA	51	True	AATAGA	-44	NA	79540214	79550545	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_79540447_79542308_79542392_79546065_79547245_79550108
H1_mix_00020718	chr12	+	1136	1	FSM	ENSG00000111058.8	ENST00000616449.1	3833	1	633	2064	633	-2064	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCATCCCCTTTAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	80937046	80938182	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_80937000_80938200
H1_mix_00020721	chr12	+	553	6	FSM	ENSG00000133640.20	ENST00000393212.7	555	6	2	0	2	0	multi-exon	FALSE	canonical	1	1	junction_1	3.77359245282264	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTAGACAGTCTTTTG	-5	True	NA	NA	False	TATAAA	-25	NA	85036352	85047286	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_85036408_85038172_85038309_85040489_85040602_85044717_85044810_85046019_85046138_85047246
H1_mix_00020723	chr12	+	358	3	FSM	ENSG00000281333.2	ENST00000625763.1	493	3	5	130	5	-130	multi-exon	FALSE	canonical	1	3	junction_2	4	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATATGCCCGCACAAATAT	-8	True	NA	NA	False	AATATA	-12	NA	88580535	88598088	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_88580611_88581996_88582139_88597947
H1_mix_00020728	chr12	+	3756	2	FSM	ENSG00000120833.14	ENST00000548537.1	3733	2	-23	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCACTTATTGAGTTCTA	-16	True	NA	17	True	AATAAA	-20	NA	93571680	93576206	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_93571915_93572684
H1_mix_00020729	chr12	+	1176	1	FSM	ENSG00000236349.1	ENST00000307241.5	1296	1	203	-83	203	83	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGTTGGGGAGGAAAAGGGG	NA	False	NA	NA	False	CATAAA	-37	NA	94548443	94549619	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_94548400_94549600
H1_mix_00020730	chr12	+	646	6	FSM	ENSG00000028203.19	ENST00000550803.5	648	6	2	0	2	0	multi-exon	TRUE	canonical	2	5	junction_4	91.2569997315274	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTGGTACTGTCCAGAA	2	True	NA	NA	False	NA	NA	NA	95217747	95263074	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_95217887_95251939_95252072_95256549_95256623_95257149_95257240_95258244_95258288_95262905
H1_mix_00020731	chr12	+	580	4	FSM	ENSG00000028203.19	ENST00000549002.5	566	4	-14	0	2	0	multi-exon	FALSE	canonical	3	30	junction_2	110.55315463613	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGCCAAACTACAAGTGAC	2	True	NA	NA	False	NA	NA	NA	95217747	95266489	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_95217887_95251939_95252072_95262905_95263082_95266356
H1_mix_00020736	chr12	+	2254	11	NIC	ENSG00000028203.19	novel	4510	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	113.821087677108	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAGATAGAAGAAAAGTAAG	11	True	NA	NA	False	AATAAA	-3	NA	95217823	95300654	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_95217887_95251939_95252072_95262905_95263082_95266356_95266633_95270050_95270189_95274745_95274890_95282312_95282645_95287663_95287858_95294271_95294373_95296050_95296259_95300164
H1_mix_00020737	chr12	+	2876	12	NIC	ENSG00000028203.19	novel	2712	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	95.7703865615502	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGATGTGTGCTGGGGTT	11	True	NA	13	True	AATAAA	-16	NA	95217823	95301170	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_95217887_95251939_95252072_95257149_95257240_95262905_95263082_95266356_95266633_95270038_95270189_95274741_95274890_95282312_95282645_95287663_95287858_95294271_95294373_95296050_95296259_95300164
H1_mix_00020738	chr12	+	2996	14	NIC	ENSG00000028203.19	novel	3002	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	124.286174832271	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATGTGTGCTGGGGTTTG	11	True	NA	15	True	AATAAA	-18	NA	95217823	95301172	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_95217887_95224179_95224237_95251939_95252072_95256549_95256623_95257149_95257240_95262905_95263082_95266356_95266633_95270050_95270189_95274741_95274890_95282312_95282645_95287663_95287858_95294271_95294373_95296050_95296259_95300164
H1_mix_00020739	chr12	+	4394	11	NIC	ENSG00000028203.19	novel	4510	12	NA	NA	0	-9	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	113.821087677108	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGAACTTTGCTCTTC	11	True	NA	2	True	AATAAA	-14	NA	95217823	95302790	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_95217887_95251939_95252072_95262905_95263082_95266356_95266633_95270050_95270189_95274741_95274890_95282312_95282645_95287663_95287858_95294271_95294373_95296050_95296259_95300164
H1_mix_00020741	chr12	+	2476	9	NIC	ENSG00000028203.19	novel	4510	12	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_4	122.028621130454	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGATGTGTGCTGGGGTT	23	False	NA	13	True	AATAAA	-16	NA	95217835	95301170	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_95217887_95251939_95252072_95262905_95263082_95266356_95266633_95282312_95282645_95287663_95287858_95294271_95294373_95296050_95296259_95300164
H1_mix_00020743	chr12	+	764	1	FSM	ENSG00000257150.4	ENST00000548011.1	764	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCGGCGGGCGGACTACT	NA	False	NA	NA	False	NA	NA	NA	95672304	95673068	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_95672300_95673100
H1_mix_00020744	chr12	+	2559	1	Intergenic	novelGene_327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACACAAAGCCTGTTTGGT	NA	False	NA	NA	False	AATAAA	-13	NA	95752284	95754843	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_95752300_95754800
H1_mix_00020745	chr12	+	539	3	FSM	ENSG00000111145.8	ENST00000547249.1	539	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	11	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTGGCCAAGCTGTGGG	15	True	NA	NA	False	NA	NA	NA	96194401	96223682	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_96194706_96198025_96198143_96223564
H1_mix_00020746	chr12	+	430	2	FSM	ENSG00000188596.11	ENST00000554621.1	724	2	32	262	26	-262	multi-exon	FALSE	canonical	1	1	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGCCTCTGCAGGAAA	7	True	NA	NA	False	AATGAA	-2	NA	96489602	96500939	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_96489927_96500833
H1_mix_00020749	chr12	+	2632	9	FSM	ENSG00000255794.10	ENST00000660138.1	2632	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	6.75925291729789	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGTCTATTTCCTTTA	33	False	NA	13	True	AATAAA	-15	NA	97465169	97565035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_97465728_97492460_97492607_97493176_97493286_97493874_97494003_97494694_97494882_97530654_97530860_97560536_97560699_97560796_97561048_97564149
H1_mix_00020750	chr12	+	1456	9	NIC	ENSG00000255794.10	novel	1587	10	NA	NA	-204	-86	combination_of_known_junctions	FALSE	canonical	2	8	junction_3	7.68012857965282	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTCCTTTCCGTATGTGG	279	False	NA	NA	False	AAGAAA	-26	NA	97465516	97564814	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_97465728_97492460_97492607_97493180_97493286_97493890_97494003_97494694_97494882_97530654_97530860_97560536_97560699_97560796_97561048_97564737
H1_mix_00020755	chr12	+	7039	26	FSM	ENSG00000120868.14	ENST00000359972.6	7029	26	-10	0	0	0	multi-exon	TRUE	canonical	2	7	junction_3	19.8997487421324	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGATTGTTTCATTCT	30	True	NA	16	True	AATAAA	-26	NA	98645289	98735433	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_98645836_98648318_98648498_98648625_98648783_98649486_98649685_98659159_98659344_98662455_98662569_98662674_98662807_98665552_98665792_98666189_98666358_98667512_98667645_98670972_98671087_98671534_98671720_98677424_98677552_98680276_98680403_98683142_98683275_98686747_98686874_98699407_98699570_98706484_98706611_98708584_98708705_98712318_98712436_98715426_98715553_98723192_98723313_98723638_98723765_98725414_98725541_98727172_98727317_98732419
H1_mix_00020756	chr12	+	628	3	FSM	ENSG00000120868.14	ENST00000547743.1	651	3	0	23	0	-23	multi-exon	FALSE	canonical	3	62	junction_1	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACTGAAAACTGCATGTT	411	False	NA	NA	False	NA	NA	NA	98645670	98648909	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_98645836_98648318_98648498_98648625
H1_mix_00020757	chr12	+	6581	26	FSM	ENSG00000120868.14	ENST00000550527.5	6581	26	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	22.5829670326997	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACATTTTTGGATTGTT	3093	False	NA	9	True	AATAAA	-19	NA	98648352	98735426	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_98648498_98648625_98648783_98649486_98649685_98659159_98659344_98662455_98662569_98662674_98662807_98665552_98665792_98666189_98666358_98667512_98667645_98670972_98671087_98671534_98671720_98677424_98677552_98680276_98680403_98683142_98683275_98686747_98686874_98699407_98699570_98703370_98703500_98706484_98706611_98708584_98708705_98712318_98712436_98715426_98715553_98723192_98723313_98723638_98723765_98725414_98725541_98727172_98727317_98732419
H1_mix_00020759	chr12	+	799	8	FSM	ENSG00000075089.10	ENST00000552064.5	780	8	-19	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	151.360361996374	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGAAGCTATTGTCTATT	-7	True	NA	NA	False	AAGAAA	-8	NA	100200810	100218545	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_100200920_100204939_100205058_100205675_100205758_100207662_100207787_100210294_100210352_100212255_100212355_100212449_100212529_100218414
H1_mix_00020763	chr12	+	6021	11	Fusion	ENSG00000257803.2_ENSG00000139354.11	novel	2229	8	NA	NA	-256	0	intron_retention	FALSE	canonical	1	2	junction_1	13.5532283976918	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAAGGTCTCAGTTTGCT	4725	False	NA	10	True	ATTAAA	-14	NA	100578487	100628286	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr12_+_100578801_100591735_100591857_100592373_100592450_100594874_100594923_100600381_100600551_100601637_100601754_100611999_100612142_100617743_100617808_100618448_100618588_100622274_100622383_100623561
H1_mix_00020764	chr12	+	334	3	FSM	ENSG00000139354.11	ENST00000548067.1	344	3	0	10	0	-10	multi-exon	FALSE	canonical	3	19	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGCAAGTGTTTCTTAT	NA	False	NA	NA	False	NA	NA	NA	100612100	100618677	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_100612142_100617743_100617808_100618448
H1_mix_00020767	chr12	+	2943	10	NIC	ENSG00000185480.12	novel	3076	11	NA	NA	-3	0	intron_retention	FALSE	canonical	3	140	junction_9	116.557515077268	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGAAACTTTATTTTCC	-16	True	NA	12	True	AATAAA	-23	NA	102120179	102197520	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_102120287_102123885_102124042_102148229_102148464_102153868_102153977_102164437_102164609_102165728_102165884_102175482_102175667_102178591_102178771_102182548_102182628_102195950
H1_mix_00020772	chr12	+	2846	6	NIC	ENSG00000185480.12	novel	3076	11	NA	NA	29066	-77	intron_retention	FALSE	canonical	2	8	junction_4	131.759781420584	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAATACCTTAGAT	NA	False	NA	NA	False	NA	NA	NA	102153053	102197284	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_102153977_102164437_102164609_102165728_102165884_102175482_102175667_102182548_102182628_102195950
H1_mix_00020773	chr12	+	201601	1	FSM	ENSG00000281344.1	ENST00000626826.1	205012	1	-64	3475	-64	-3475	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	102197520	102399121	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_102197500_102399100
H1_mix_00020774	chr12	+	2831	17	FSM	ENSG00000166598.16	ENST00000681861.1	2831	17	0	0	0	0	multi-exon	FALSE	canonical	3	4394	junction_7	593.595502925814	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGAATGTGAAATTTACAT	794	False	NA	NA	False	AAAAAG	-45	NA	103930331	103947695	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_103930565_103931520_103931624_103932276_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943320_103943737_103943875_103946617_103946697_103946785_103946942_103947310
H1_mix_00020775	chr12	+	2858	16	FSM	ENSG00000166598.16	ENST00000680762.1	2858	16	0	0	0	0	multi-exon	FALSE	canonical	3	4394	junction_7	418.374770856094	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGATGAAGAAATGGATGT	820	False	NA	-21	True	NA	NA	NA	103930357	103947379	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_103930565_103931520_103931624_103932276_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943320_103943737_103943875_103946617_103946697_103946785
H1_mix_00020776	chr12	+	6609	15	FSM	ENSG00000166598.16	ENST00000681704.1	6609	15	0	0	0	0	multi-exon	FALSE	canonical	3	4394	junction_6	699.576183653141	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATCCCAAATACTCAGT	-14	True	NA	-1	True	AATAAA	-1	NA	103930382	103947912	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_103930565_103931520_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103946697_103946785_103946942_103947310_103947431_103947632
H1_mix_00020777	chr12	+	2776	18	FSM	ENSG00000166598.16	ENST00000679538.1	2775	18	-1	0	0	0	multi-exon	FALSE	canonical	1	166	junction_2	1412.57065965286	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCAGTGTCTTGACTG	13	True	NA	9	True	AATAAA	-11	NA	103930409	103947922	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_103930565_103931520_103931624_103932278_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943320_103943737_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
H1_mix_00020782	chr12	+	3599	15	FSM	ENSG00000198431.17	ENST00000524698.5	1933	15	-5	-1661	-5	-2	multi-exon	FALSE	canonical	1	13	junction_1	149.580228967465	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATGGTCTTGGGAGTCT	325	False	NA	35	True	ATTAAA	-42	NA	104287362	104350305	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_104287432_104288930_104289041_104311289_104311413_104313244_104313318_104315776_104315897_104318912_104319056_104319469_104319586_104321090_104321317_104325336_104325430_104326346_104326424_104327514_104327672_104331533_104331642_104334236_104334333_104339138_104339274_104348352
H1_mix_00020783	chr12	+	1526	1	FSM	ENSG00000255150.2	ENST00000527879.2	1467	1	-61	2	-61	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAAGGGATATTTGATAA	8159	False	NA	9	True	AATAAA	-19	NA	104303677	104305203	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_104303700_104305200
H1_mix_00020784	chr12	+	5734	3	FSM	ENSG00000171310.11	ENST00000303694.6	5734	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	17	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTTCTGTGTATGGTT	1	True	NA	8	True	ATTAAA	-16	NA	104456947	104762014	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_104457530_104601905_104601992_104756948
H1_mix_00020785	chr12	+	2896	25	FSM	ENSG00000136051.15	ENST00000311317.8	2897	25	1	0	0	0	multi-exon	TRUE	canonical	3	9	junction_24	48.7490740652807	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAACAAACAA	-32	True	NA	NA	False	NA	NA	NA	105107714	105147905	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_105107862_105111124_105111265_105114215_105114270_105114361_105114428_105115183_105115230_105115660_105115729_105118445_105118529_105120554_105120598_105121100_105121205_105122117_105122239_105126003_105126128_105126234_105126363_105127128_105127290_105133769_105133897_105137885_105138012_105140293_105140402_105140898_105141046_105141166_105141247_105142452_105142559_105143126_105143244_105144286_105144456_105144717_105144873_105146451_105146527_105147041_105147147_105147609
H1_mix_00020786	chr12	+	5819	33	FSM	ENSG00000136051.15	ENST00000550053.5	5819	33	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	44.0835499364559	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTCCCCTGGATGTTT	-32	True	NA	39	True	AATAAA	-15	NA	105107714	105169130	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_105107862_105111124_105111265_105114215_105114270_105114361_105114428_105115183_105115230_105115660_105115729_105118445_105118529_105120554_105120598_105121088_105121205_105122117_105122239_105126003_105126128_105126234_105126363_105127128_105127290_105133769_105133897_105137885_105138012_105140293_105140402_105140898_105141046_105141166_105141247_105142452_105142559_105143126_105143244_105144286_105144456_105144717_105144873_105146451_105146527_105147041_105147147_105149614_105149750_105152342_105152452_105156725_105156793_105157235_105157323_105160000_105160149_105162748_105162846_105164110_105164308_105164640_105164741_105166863
H1_mix_00020793	chr12	+	306	6	FSM	ENSG00000235162.9	ENST00000549934.2	291	6	-15	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	259.43985815599	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCACAGACATTTCCAAGG	-9	True	NA	NA	False	NA	NA	NA	105330852	105370680	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_105330938_105348601_105348627_105365806_105365843_105366616_105366697_105367476_105367510_105370633
H1_mix_00020794	chr12	+	689	1	FSM	ENSG00000257773.1	ENST00000546640.1	1110	1	370	51	370	-51	mono-exon	FALSE	NA	NA	NA	NA	NA	4395	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATGAATCTCATCAGTAA	NA	False	NA	NA	False	NA	NA	NA	106016266	106016955	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_106016300_106017000
H1_mix_00020795	chr12	+	509	1	FSM	ENSG00000277715.1	ENST00000611145.1	2028	1	-452	1971	-452	-1971	mono-exon	FALSE	NA	NA	NA	NA	NA	593	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTATGATGGCACCACTGT	1041	False	NA	NA	False	NA	NA	NA	106250306	106250815	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_106250300_106250800
H1_mix_00020796	chr12	+	5150	11	NIC	ENSG00000111785.21	novel	3389	13	NA	NA	14	-12	combination_of_known_splicesites	FALSE	canonical	2	2	junction_8	79.27395536997	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAAAAAGTAATGGCTATA	45	False	NA	-7	True	AATAAA	-6	NA	106774759	106889304	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_106774830_106783996_106784045_106814695_106815305_106825725_106825821_106842588_106842818_106843851_106843948_106851449_106851595_106860267_106860413_106878986_106879126_106879774_106879948_106885903
H1_mix_00020800	chr12	+	270	1	FSM	ENSG00000257426.1	ENST00000549599.1	178	1	-180	88	-180	-88	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCCTTTTGTGCTGTCCA	NA	False	NA	NA	False	NA	NA	NA	107899457	107899727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_107899500_107899700
H1_mix_00020801	chr12	+	696	2	FSM	ENSG00000198855.7	ENST00000552758.1	603	2	-20	-73	3	73	multi-exon	FALSE	canonical	3	62	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAGGGTGAAGGGCATCC	-11	True	NA	NA	False	NA	NA	NA	108515279	108517528	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_108515362_108516914
H1_mix_00020807	chr12	+	5115	38	NIC	ENSG00000076555.16	novel	3654	26	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	2	6	junction_25	5.4319617921718	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCAGAGGAGATCAAACAC	-3	True	NA	NA	False	NA	NA	NA	109154681	109246386	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_109154941_109166860_109166994_109167895_109168035_109171804_109171915_109172274_109172357_109174131_109174231_109175930_109176041_109176152_109176264_109179087_109179298_109179916_109180088_109185578_109185741_109187998_109188163_109191612_109191764_109191846_109191951_109193647_109193730_109197007_109197154_109199401_109199553_109201566_109201702_109206709_109206857_109209164_109209354_109212835_109212937_109216617_109216707_109216795_109216921_109222506_109222621_109222798_109222913_109223814_109223905_109227370_109227490_109232668_109232807_109233747_109233848_109233937_109234046_109235312_109235370_109235605_109235648_109237164_109237381_109239829_109239986_109241077_109241282_109242436_109242593_109245625_109245749_109246178
H1_mix_00020808	chr12	+	223	2	FSM	ENSG00000076555.16	ENST00000544651.1	358	2	135	0	135	0	multi-exon	FALSE	canonical	3	13	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATGACAGATTTCTTACA	3609	False	NA	NA	False	NA	NA	NA	109191612	109191918	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_109191764_109191846
H1_mix_00020812	chr12	+	900	6	FSM	ENSG00000110921.14	ENST00000546277.5	886	6	-14	0	-14	0	multi-exon	FALSE	canonical	1	2	junction_1	47.4130783645188	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGAGTGGACAATGCTGTCA	NA	False	NA	NA	False	NA	NA	NA	109573287	109586096	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_109573572_109574808_109574901_109575997_109576146_109579801_109579947_109581394_109581551_109586021
H1_mix_00020813	chr12	+	548	4	FSM	ENSG00000110921.14	ENST00000535044.1	548	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	65.4437841883314	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGGACAATGCTGTCAGC	NA	False	NA	NA	False	NA	NA	NA	109573340	109586098	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_109573572_109574808_109574901_109575997_109576146_109586021
H1_mix_00020814	chr12	+	546	5	FSM	ENSG00000110921.14	ENST00000545774.5	702	5	0	156	0	-156	multi-exon	FALSE	canonical	3	13	junction_3	48.7461536944198	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAATGTGGCCCTCACAG	29	True	NA	NA	False	NA	NA	NA	109573831	109586913	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_109573874_109574808_109574901_109575997_109576146_109586021_109586126_109586753
H1_mix_00020815	chr12	+	1775	10	FSM	ENSG00000110921.14	ENST00000392727.7	1770	10	-5	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	33.505481401565	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTAGAGACTCCAGGCCAC	29	True	NA	14	True	AATAAA	-16	NA	109573831	109597261	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_109573874_109574808_109574901_109575997_109576146_109579801_109579947_109586021_109586126_109586753_109586800_109590770_109590862_109591240_109591358_109595027_109595182_109596425
H1_mix_00020816	chr12	+	1897	10	NNC	ENSG00000110921.14	novel	2747	10	NA	NA	-293	0	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_1	44.2668674694241	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGAGACTCCAGGCCACCA	711	False	NA	16	True	AATAAA	-18	NA	109574513	109597263	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_109574676_109574808_109574901_109575997_109576146_109579801_109579947_109586021_109586126_109586753_109586800_109590770_109590862_109591240_109591358_109595027_109595182_109596425
H1_mix_00020817	chr12	+	1611	8	FSM	ENSG00000110921.14	ENST00000629016.2	1591	8	-20	0	-20	0	multi-exon	FALSE	canonical	3	13	junction_2	37.3887465335084	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGAGACTCCAGGCCACC	984	False	NA	15	True	AATAAA	-17	NA	109574786	109597262	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_109574901_109575997_109576146_109586021_109586126_109586753_109586800_109590770_109590862_109591240_109591358_109595027_109595182_109596425
H1_mix_00020821	chr12	+	465	4	FSM	ENSG00000139437.18	ENST00000549550.1	465	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	1.88561808316413	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATTCGAAATCTTGAGGA	8234	False	NA	NA	False	NA	NA	NA	109908814	109914528	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_109908938_109911062_109911236_109912990_109913073_109914441
H1_mix_00020823	chr12	+	549	6	FSM	ENSG00000122970.16	ENST00000551273.1	549	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	69.8128927920911	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCTGAGCCATCTCATG	8130	False	NA	NA	False	TTTAAA	-11	NA	110132592	110163065	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_110132637_110134947_110135014_110135326_110135438_110136775_110136861_110146952_110147049_110162918
H1_mix_00020824	chr12	+	1000	3	FSM	ENSG00000174437.18	ENST00000547050.1	1176	3	176	0	176	0	multi-exon	FALSE	canonical	3	487	junction_1	39	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTTAATGAGTTTACCAT	NA	False	NA	NA	False	NA	NA	NA	110325976	110332632	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_110326476_110327552_110328018_110332596
H1_mix_00020825	chr12	+	5575	2	FSM	ENSG00000174437.18	ENST00000313432.5	5575	2	0	0	0	0	multi-exon	FALSE	canonical	3	522	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCAGTGTGGTGGTGACT	133	False	NA	NA	False	AATAAA	-17	NA	110345436	110351093	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_110346119_110346200
H1_mix_00020826	chr12	+	1169	5	FSM	ENSG00000204856.12	ENST00000548869.1	1160	5	-9	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	91.0755181154628	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATTTTGTATTTTTAATA	-9	True	NA	NA	False	NA	NA	NA	110468414	110487298	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_110468526_110473077_110473119_110485077_110485200_110486324_110486455_110486533
H1_mix_00020836	chr12	+	213	2	FSM	ENSG00000257595.3	ENST00000548846.1	209	2	-4	0	-4	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1619	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTCTTGGGGTCTCAGCG	3044	False	NA	10	True	AATAAA	-13	NA	111396830	111403307	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_111396874_111403137
H1_mix_00020847	chr12	+	1775	14	FSM	ENSG00000111275.13	ENST00000548536.1	1760	14	-15	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	161.682280300946	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAACCAAGAAAAATGAT	-11	True	NA	NA	False	NA	NA	NA	111766932	111809630	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_111767097_111775604_111775721_111781917_111782023_111783157_111783299_111785266_111785347_111789822_111789935_111790433_111790563_111791305_111791420_111792060_111792164_111792597_111792783_111798077_111798243_111799905_111800064_111803858_111803974_111809542
H1_mix_00020848	chr12	+	2015	13	NIC	ENSG00000089022.14	novel	1630	14	NA	NA	11	96	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	217.698376965317	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTTAGGACTGTGTAGT	12	True	NA	-83	True	AAGAAA	-24	NA	111842238	111893257	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_111842770_111865249_111865324_111866155_111866232_111868752_111868862_111870270_111870361_111871084_111871181_111880446_111880528_111883580_111883769_111885915_111886037_111888487_111888619_111888884_111889007_111890039_111890145_111892966
H1_mix_00020849	chr12	+	567	5	FSM	ENSG00000089022.14	ENST00000546394.1	567	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	236.441853317047	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCGCACAGAGACCTCAAG	261	False	NA	NA	False	NA	NA	NA	111842487	111870307	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_111842770_111865249_111865324_111866155_111866232_111867571_111867670_111870270
H1_mix_00020850	chr12	+	954	4	FSM	ENSG00000089022.14	ENST00000552111.5	954	4	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_3	153.226049424444	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTAGGAGCCTTCATCAA	NA	False	NA	NA	False	NA	NA	NA	111885437	111890141	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_111886037_111888487_111888619_111888884_111889007_111890039
H1_mix_00020852	chr12	+	2946	3	FSM	ENSG00000089248.7	ENST00000546477.1	1698	3	-708	-540	-708	259	multi-exon	FALSE	canonical	2	23	junction_1	873	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTGGTAGCTTAGGCTAA	4564	False	NA	NA	False	AATAGA	-36	NA	112018095	112023708	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_112019344_112019755_112019895_112022149
H1_mix_00020854	chr12	+	281	1	FSM	ENSG00000200135.1	ENST00000363265.1	113	1	-196	28	-196	-28	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCACTATTGCACTTGAAT	967	False	NA	NA	False	NA	NA	NA	112149163	112149444	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_112149200_112149400
H1_mix_00020855	chr12	+	6079	16	NIC	ENSG00000179295.19	novel	6073	16	NA	NA	1	-5	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_10	215.288787962175	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCATTTGTCGTTTGCTTC	6	True	NA	-1	True	AATAAA	-18	NA	112418947	112509913	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_112419126_112446275_112446399_112450317_112450513_112453194_112453388_112454563_112454681_112455949_112456064_112472943_112473041_112477650_112477731_112477856_112478016_112482073_112482206_112486462_112486630_112488442_112488511_112489023_112489176_112502143_112502257_112504694_112504797_112505824
H1_mix_00020856	chr12	+	742	3	FSM	ENSG00000111331.14	ENST00000548514.2	1427	3	0	685	0	-241	multi-exon	FALSE	canonical	3	6	junction_2	1.5	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAGCCACTTGGAAGGGT	28	False	NA	NA	False	NA	NA	NA	112938424	112944651	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_112938708_112941569_112941853_112944475
H1_mix_00020859	chr12	+	1403	1	FSM	ENSG00000277566.1	ENST00000622440.1	577	1	-633	-193	-633	193	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCCTGCTCAGATTGTGG	4132	False	NA	NA	False	NA	NA	NA	113248832	113250235	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_113248800_113250200
H1_mix_00020864	chr12	+	3363	1	FSM	ENSG00000257979.1	ENST00000553000.1	214	1	-2881	-268	-2881	268	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTCAATATATAACAATACG	NA	False	NA	NA	False	NA	NA	NA	116166163	116169526	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_116166200_116169500
H1_mix_00020867	chr12	+	4222	12	NNC	ENSG00000174989.13	novel	4861	11	NA	NA	0	1350	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	40.6360585711551	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACTGTGTGTGAAATGGT	-28	True	NA	17	True	AATAAA	-18	NA	116910949	117032498	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_116911356_116928022_116928128_116945363_116945529_116949617_116949707_116964696_116964855_116985205_116985403_116988662_116988870_117010322_117010451_117024146_117024321_117027393_117027505_117028027_117029661_117031649
H1_mix_00020869	chr12	+	2470	12	FSM	ENSG00000111445.14	ENST00000392542.6	2449	12	-21	0	0	0	multi-exon	TRUE	canonical	3	18	junction_2	129.869864934795	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATGTCAAATTCTTAAA	-37	True	NA	14	True	AATAAA	-24	NA	118016700	118032234	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_118016893_118017689_118018054_118019071_118019137_118019631_118019769_118020905_118020986_118022285_118022360_118024850_118025011_118025746_118025829_118026888_118027019_118027952_118028031_118029770_118029826_118031181
H1_mix_00020870	chr12	+	580	3	FSM	ENSG00000111445.14	ENST00000472603.1	681	3	0	101	0	-101	multi-exon	FALSE	canonical	3	315	junction_1	3.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAGGAATTTTCAAGTGG	8178	False	NA	NA	False	NA	NA	NA	118024915	118027291	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_118025011_118025746_118025829_118026888
H1_mix_00020871	chr12	+	1061	6	FSM	ENSG00000111445.14	ENST00000543153.1	1061	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	160.260537875049	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTTGAATGAGGTGT	NA	False	NA	24	True	ATTAAA	-15	NA	118026889	118033130	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_118027019_118027952_118028031_118029770_118029826_118031181_118031661_118032484_118032619_118032944
H1_mix_00020872	chr12	+	561	4	FSM	ENSG00000111707.12	ENST00000541591.5	561	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	343.180224760499	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACTGTTTTACTTTCAGG	NA	False	NA	NA	False	NA	NA	NA	118401771	118414655	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_118401821_118403411_118403518_118411072_118411158_118414334
H1_mix_00020873	chr12	+	940	1	FSM	ENSG00000275409.1	ENST00000610630.1	553	1	-396	9	-396	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTGTGCACTGTGCTGA	NA	False	NA	2	True	AATAAA	-15	NA	118429750	118430690	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_118429800_118430700
H1_mix_00020874	chr12	+	410	1	FSM	ENSG00000244112.3	ENST00000464472.3	303	1	171	-278	171	278	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCACCCTGATGTTTAC	657	False	NA	NA	False	NA	NA	NA	118994027	118994437	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_118994000_118994400
H1_mix_00020875	chr12	+	3605	8	NIC	ENSG00000135127.12	novel	3055	9	NA	NA	-136	0	intron_retention	FALSE	canonical	3	21	junction_5	22.5325161869305	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTGCCTCAGTCTCTG	NA	False	NA	7	True	AATAAA	-16	NA	119989099	120094494	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_119990298_119998520_119998737_120061709_120061827_120064732_120064880_120071621_120071802_120080886_120081018_120089950_120090072_120092999
H1_mix_00020879	chr12	+	446	2	NIC	ENSG00000239881.1	novel	484	3	NA	NA	-126	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAGCACTCTGAATCAAG	NA	False	NA	NA	False	NA	NA	NA	120369313	120371635	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_120369526_120371401
H1_mix_00020884	chr12	+	1857	6	FSM	ENSG00000157782.10	ENST00000453000.1	1857	6	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	14.6205335059977	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGCCGTGATGGTCTTTC	4771	False	NA	16	True	AATAAA	-18	NA	120655298	120667324	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_120656273_120659877_120659909_120660195_120660340_120660730_120660841_120661070_120661219_120666874
H1_mix_00020886	chr12	+	1429	10	NNC	ENSG00000135124.16	novel	1612	11	NA	NA	7	-6	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	40.2145480708563	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTAATCCCTGTCTGTT	16	True	NA	8	True	ATTAAA	-8	NA	121210135	121234098	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_121210299_121221912_121221985_121222093_121222167_121228532_121228614_121228724_121228867_121229033_121229100_121232413_121232508_121232610_121232677_121232996_121233093_121233522
H1_mix_00020887	chr12	+	4564	4	FSM	ENSG00000135124.16	ENST00000314442.7	4658	4	94	0	94	0	multi-exon	FALSE	canonical	3	84	junction_1	4.10960933531265	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCCAGCCCTAGGGAA	118	False	NA	NA	False	NA	NA	NA	121212959	121223043	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_121217282_121221912_121221985_121222093_121222167_121222946
H1_mix_00020902	chr12	+	2274	6	FSM	ENSG00000111325.16	ENST00000406539.6	2274	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	49.3534193344291	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGCGAGGGAGTCAGGG	1	True	NA	114	True	NA	NA	NA	122974741	122979533	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_122975122_122975810_122976768_122976870_122976971_122978441_122978570_122978752_122979011_122979082
H1_mix_00020905	chr12	+	5618	7	FSM	ENSG00000256028.2	ENST00000540866.2	5618	7	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	697.427335920301	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCTCTGTTCTGTGGCT	92	False	NA	15	True	ATTAAA	-15	NA	122975319	122982907	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_122975384_122975810_122975868_122976653_122976768_122976870_122978570_122978752_122981880_122981956_122982075_122982468
H1_mix_00020906	chr12	+	1432	6	NIC	ENSG00000182196.14	novel	910	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	327	junction_1	551.353026653523	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCCCCCTGGATAGACT	-1	True	NA	-2	True	NA	NA	NA	122980262	122982890	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_122980813_122981128_122981267_122981594_122981880_122981956_122982075_122982468_122982539_122982619
H1_mix_00020907	chr12	+	1318	6	FSM	ENSG00000182196.14	ENST00000454885.6	1318	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	757.258053770312	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTTCTGTGGCTTT	-13	True	NA	17	True	ATTAAA	-17	NA	122980494	122982909	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_122980888_122981128_122981267_122981570_122981880_122981956_122982075_122982468_122982539_122982619
H1_mix_00020908	chr12	+	1033	5	NIC	ENSG00000182196.14	novel	1318	6	NA	NA	4	7	intron_retention	FALSE	canonical	3	61	junction_2	642.43146521633	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGATAGACTTTCTCTG	7	True	NA	5	True	ATTAAA	-5	NA	122980706	122982897	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_122980746_122981128_122981267_122981570_122981880_122981956_122982075_122982468
H1_mix_00020911	chr12	+	1782	3	FSM	ENSG00000182196.14	ENST00000540708.5	1782	3	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_1	621	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCCCCCTGGATAGACT	16	True	NA	-2	True	NA	NA	NA	122980715	122982890	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_122980813_122981128_122981880_122981956
H1_mix_00020916	chr12	+	3035	2	FSM	ENSG00000130921.9	ENST00000546132.2	3022	2	-13	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGGAGGCTGAGGCAGGA	-25	True	NA	NA	False	AATACA	-44	NA	123233435	123256585	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_123233532_123253646
H1_mix_00020921	chr12	+	2624	15	NNC	ENSG00000111364.16	novel	2656	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	81	junction_14	58.653774866776	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAGTGTGTAAATGTAG	-21	True	NA	27	True	AATAAA	-21	NA	123602098	123620943	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_123602257_123605930_123605982_123606072_123606160_123607431_123607524_123607599_123607663_123608679_123608830_123609938_123610129_123613169_123613253_123615184_123615317_123616510_123616604_123617757_123617873_123618668_123618838_123619431_123619725_123619963_123620581_123620612
H1_mix_00020932	chr12	+	3232	18	NNC	ENSG00000081760.17	novel	3256	18	NA	NA	19	0	at_least_one_novel_splicesite	TRUE	canonical	1	4	junction_13	45.6870655489878	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATGCTGTGTGTGCAGTG	15	False	NA	11	True	AATAAA	-23	NA	125065453	125143316	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_125065718_125073875_125073980_125076490_125076612_125086329_125086444_125091425_125091524_125102678_125102794_125102999_125103082_125107120_125107269_125114476_125114558_125118640_125118766_125124704_125124770_125124901_125125025_125128160_125128275_125129339_125129461_125134002_125134073_125134793_125134853_125136661_125136865_125142091
H1_mix_00020957	chr12	+	1730	6	FSM	ENSG00000185684.16	ENST00000389560.6	1726	6	-7	3	0	0	multi-exon	FALSE	canonical	2	2	junction_1	25.9615099714943	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCATTAGTTCTGTTAAC	14	True	NA	12	True	ATTAAA	-14	NA	132084312	132108896	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_132084400_132090848_132090944_132091394_132091517_132103996_132104171_132104377_132105305_132108571
H1_mix_00020959	chr12	+	8268	13	NIC	ENSG00000185684.16	novel	2741	11	NA	NA	0	-2	intron_retention	FALSE	canonical	2	3	junction_7	17.3869363476018	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTCTTGTCTCTTGTCT	14	True	NA	NA	False	NA	NA	NA	132084312	132131637	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_132084400_132084963_132085317_132090848_132090944_132103996_132104171_132104374_132105305_132108571_132108683_132109767_132109833_132114457_132114546_132120419_132120602_132121439_132121580_132121924_132121981_132125193_132125397_132125853
H1_mix_00020964	chr12	+	3063	15	NNC	ENSG00000112787.14	novel	1246	9	NA	NA	0	-892	at_least_one_novel_splicesite	FALSE	canonical	3	150	junction_3	63.3126353575522	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTTTTTTGCCTTATT	32	True	NA	16	True	ATTAAA	-17	NA	132560046	132584296	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_132560231_132567480_132567527_132569925_132570242_132570337_132570541_132571067_132571232_132572287_132572345_132572526_132572623_132574089_132574159_132574318_132574349_132574492_132574565_132576798_132576932_132581438_132581517_132581740_132581825_132582061_132582267_132582970
H1_mix_00020966	chr12	+	2988	15	NIC	ENSG00000112787.14	novel	1246	9	NA	NA	25	-893	combination_of_known_junctions	FALSE	canonical	3	30	junction_4	93.3901187798489	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTTTTTTTGCCTTAT	98	False	NA	15	True	ATTAAA	-16	NA	132560177	132584295	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_132560231_132567480_132567527_132569925_132570242_132570334_132570541_132571306_132571525_132572287_132572345_132572526_132572623_132574089_132574159_132574318_132574349_132574492_132574565_132576798_132576932_132581438_132581517_132581740_132581825_132582061_132582267_132582970
H1_mix_00020974	chr12	+	559	4	FSM	ENSG00000198040.11	ENST00000438628.6	559	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	96.6103284103494	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGAGAAATTCCAAGTTCA	14	True	NA	NA	False	NA	NA	NA	133037393	133048818	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_133037555_133041277_133041483_133047954_133048082_133048752
H1_mix_00020975	chr12	+	3349	6	NNC	ENSG00000198040.11	novel	7020	5	NA	NA	0	-15	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	106.747552665155	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACATCTAAGACATTTCT	14	True	NA	5	True	AATAAA	-10	NA	133037393	133059591	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_133037546_133038874_133039013_133041284_133041483_133047954_133048082_133048752_133048849_133056953
H1_mix_00020977	chr12	+	653	3	FSM	ENSG00000198040.11	ENST00000539686.5	637	3	-16	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	115.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGCCACATCTTATACCA	5	True	NA	NA	False	NA	NA	NA	133037508	133048356	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_133037555_133041277_133041483_133047954
H1_mix_00020978	chr12	+	7162	5	FSM	ENSG00000198040.11	ENST00000327668.11	7162	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	98.1742710693591	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGCTCAAGTTGTGTT	38	False	NA	12	True	AATAAA	-16	NA	133037579	133063297	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_133037970_133041277_133041483_133047954_133048082_133048752_133048849_133056953
H1_mix_00020992	chr12	-	5119	12	NNC	ENSG00000226210.3	novel	1817	11	NA	NA	255	36	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_9	96.926230788554	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCAGGATGCAAACGTCT	NA	False	NA	NA	False	AATAAA	-12	NA	31760	14485	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_14945_15084_15154_15912_16066_16721_16881_16968_17171_17347_17484_17722_17860_18036_18184_18372_18475_19017_22033_26800_26955_31374
H1_mix_00020993	chr12	-	3251	7	NNC	ENSG00000226210.3	novel	1817	11	NA	NA	489	1	intron_retention	FALSE	canonical	3	15	junction_2	100.306197880955	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAACAGTGTGCTTTTAA	NA	False	NA	NA	False	AATAAA	-13	NA	31526	14520	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_16881_16968_17171_17722_17860_18036_18184_18372_18472_26800_26955_31374
H1_mix_00020994	chr12	-	431	4	FSM	ENSG00000111181.13	ENST00000540094.1	557	4	0	126	0	-126	multi-exon	FALSE	canonical	0	0	junction_1	0.816496580927726	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTACCGTGCTGGGACC	8396	False	NA	NA	False	NA	NA	NA	202814	198796	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_198932_200650_200784_201761_201850_202739
H1_mix_00020995	chr12	-	11795	29	NNC	ENSG00000073614.13	novel	10701	28	NA	NA	-154	998	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	16.2532571304012	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCATAGAAACATCTCGTT	81	False	NA	NA	False	NA	NA	NA	389474	279058	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_282028_282085_285663_292758_293170_295572_295794_297040_297201_306945_307090_307453_308006_309802_309965_310884_311065_313055_313195_318105_318462_320994_321110_322416_322568_323081_323207_323599_323782_328834_329030_331818_331939_333486_333650_334240_334423_350620_350780_352204_352325_354075_354235_355157_355250_356431_356538_362962_363098_365933_366105_384030_384154_385896_385975_388926
H1_mix_00020997	chr12	-	670	4	FSM	ENSG00000171840.13	ENST00000542920.1	670	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2.49443825784929	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCTCCCTACCCACAGCA	NA	False	NA	NA	False	NA	NA	NA	643665	564580	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_564682_565216_565402_565949_566179_643510
H1_mix_00020998	chr12	-	612	1	FSM	ENSG00000243663.1	ENST00000493072.1	781	1	-13	182	-13	-182	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGATGTGGTTCACATGA	6	False	NA	NA	False	NA	NA	NA	1758024	1757412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_1757400_1758000
H1_mix_00020999	chr12	-	916	3	Fusion	ENSG00000256271.1_ENSG00000246627.6	novel	609	2	NA	NA	-15	-46	intron_retention	FALSE	canonical	2	8	junction_2	4	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGCTGAACTGTGGGCC	-11	True	NA	NA	False	NA	NA	NA	2691133	2668545	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr12_-_2669017_2672128_2672247_2690806
H1_mix_00021000	chr12	-	2281	2	FSM	ENSG00000111206.13	ENST00000536066.1	2518	2	238	-1	94	0	multi-exon	FALSE	canonical	3	325	junction_1	0	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTCTGTGGTTTATTGG	NA	False	NA	-5	True	AATAAA	-18	NA	2864616	2857679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_2859664_2864319
H1_mix_00021001	chr12	-	1573	9	NNC	ENSG00000111206.13	novel	3475	10	NA	NA	14	-124	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	143.52520466803	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGGAGAAACTCCTGTTT	12	True	NA	NA	False	NA	NA	NA	2877141	2859611	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_2859664_2861378_2861413_2864319_2864496_2864682_2864753_2866392_2866522_2868562_2868755_2872095_2872245_2873976_2874526_2876919
H1_mix_00021002	chr12	-	377	2	Genic_Genomic	ENSG00000227081.5	novel	255	1	NA	NA	-35	924	multi-exon	FALSE	non_canonical	0	0	junction_1	0	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATCCATGAGATAGCATG	NA	False	NA	NA	False	NA	NA	NA	3211952	3210738	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr12_-_3210756_3211592
H1_mix_00021003	chr12	-	1559	11	FSM	ENSG00000130038.10	ENST00000252322.1	2186	11	28	599	28	-599	multi-exon	FALSE	canonical	1	1	junction_7	2.04939015319192	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCGTCGGTGGGCACTGGC	677	False	NA	NA	False	NA	NA	NA	3753069	3648541	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_3648614_3654211_3654400_3656310_3656407_3659563_3659655_3673445_3673593_3678914_3679099_3680237_3680350_3696771_3697036_3713236_3713318_3732941_3733211_3753014
H1_mix_00021004	chr12	-	2151	9	NNC	ENSG00000111224.14	novel	4406	8	NA	NA	1	2608	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	31.6770816206291	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAACCATTCAAATTGTG	6	True	NA	NA	False	ATTAAA	-16	NA	3873354	3806252	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_3807104_3811965_3812440_3814036_3814189_3821872_3822004_3822084_3822158_3826157_3826234_3829889_3830019_3863835_3863958_3873211
H1_mix_00021005	chr12	-	367	1	FSM	ENSG00000213970.4	ENST00000493323.1	440	1	-79	152	-79	-152	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTACAACGGCAAGACCTTC	NA	False	NA	NA	False	NA	NA	NA	4324890	4324523	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_4324500_4324900
H1_mix_00021006	chr12	-	525	3	FSM	ENSG00000111254.8	ENST00000540967.5	631	3	106	0	63	0	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAACCCACACCCACCA	3935	False	NA	NA	False	AAAACA	-29	NA	4645094	4628416	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_4628806_4638100_4638197_4645054
H1_mix_00021009	chr12	-	3985	13	NIC	ENSG00000111319.13	novel	3149	13	NA	NA	-219	0	intron_retention	FALSE	canonical	3	36	junction_12	73.9243231660294	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGTCTGGAGAGCTGGA	7749	False	NA	-2	True	AATAAA	-16	NA	6376247	6346846	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_6348254_6348726_6348803_6348949_6349006_6349163_6349222_6349326_6349406_6354437_6354556_6354749_6354849_6355271_6355436_6355776_6355881_6362050_6362242_6363442_6363711_6374367_6374838_6375352
H1_mix_00021013	chr12	-	968	4	NNC	ENSG00000111639.8	novel	898	3	NA	NA	0	70091	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1072.71938963034	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGGTGTAGTGGCAGGC	527	False	NA	NA	False	NA	NA	NA	6493295	6421794	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_6421832_6491885_6492468_6492861_6492973_6493057
H1_mix_00021014	chr12	-	1112	6	FSM	ENSG00000215039.8	ENST00000669354.1	1132	6	0	20	0	-13	multi-exon	TRUE	canonical	1	1	junction_1	10.2489023802552	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGTATCCCCAAATAAACAA	10	True	NA	NA	False	AATAAA	-13	NA	6451547	6439177	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6439677_6443542_6443718_6446960_6447088_6448036_6448151_6448639_6448758_6451468
H1_mix_00021016	chr12	-	1068	5	FSM	ENSG00000139190.17	ENST00000400911.7	1068	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	17.606816861659	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTTGGTTGTTGTTTGG	285	False	NA	NA	False	ATTAAA	-1	NA	6470653	6462236	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6462843_6464889_6464942_6465841_6466001_6466224_6466352_6470529
H1_mix_00021018	chr12	-	422	2	FSM	ENSG00000269968.1	ENST00000602946.1	422	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTCCACCACTGACACGT	-2	True	NA	NA	False	NA	NA	NA	6538370	6537793	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6537986_6538140
H1_mix_00021020	chr12	-	2944	8	NIC	ENSG00000010295.20	novel	2786	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	39	junction_7	8.96705990084298	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTGTCACTGTCTCAA	-10	True	NA	0	True	AATGAA	-23	NA	6556071	6539527	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_6540589_6541511_6541643_6548064_6548546_6548667_6548826_6549755_6549897_6550694_6550791_6550940_6551002_6555256
H1_mix_00021024	chr12	-	689	6	FSM	ENSG00000111641.12	ENST00000536124.5	689	6	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_5	115.226733009315	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTTTGGAAGCTATTG	-1	True	NA	NA	False	NA	NA	NA	6568293	6563890	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6563947_6566100_6566337_6566528_6566618_6566776_6566823_6567815_6567923_6568138
H1_mix_00021031	chr12	-	3556	10	NNC	ENSG00000126746.18	novel	3266	10	NA	NA	0	36038	intron_retention	FALSE	non_canonical	0	0	junction_1	82.9055687715447	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGATGGGCTGGGTGCA	17	True	NA	NA	False	NA	NA	NA	6688896	6630438	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_6630473_6666477_6668116_6669030_6669190_6670759_6670839_6673215_6673441_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166
H1_mix_00021032	chr12	-	3183	11	NNC	ENSG00000126746.18	novel	3008	11	NA	NA	-103	36038	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	96.5505049184105	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGATGGGCTGGGTGCA	8407	False	NA	NA	False	NA	NA	NA	6688999	6630438	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_6630473_6666477_6668116_6669030_6669190_6670759_6670839_6673215_6673441_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166_6688227_6688702
H1_mix_00021033	chr12	-	993	5	FSM	ENSG00000111644.8	ENST00000536350.5	1053	5	60	0	-50	0	multi-exon	FALSE	canonical	0	0	junction_4	2.82842712474619	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTCCAGATCCACTCAGA	115	False	NA	NA	False	NA	NA	NA	6647333	6644054	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6644606_6645219_6645338_6646482_6646578_6646793_6647013_6647323
H1_mix_00021034	chr12	-	1277	7	FSM	ENSG00000111653.20	ENST00000619641.4	1280	7	3	0	1	0	multi-exon	FALSE	canonical	3	30	junction_5	53.4334996878259	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGCGTCCTCTGGGTTG	2	True	NA	40	True	AGTAAA	-15	NA	6663139	6650538	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6651235_6651323_6651386_6652270_6652419_6652661_6652771_6652935_6653051_6656726_6656799_6663064
H1_mix_00021041	chr12	-	3366	10	ISM	ENSG00000126746.18	ENST00000361959.7	2978	11	396	87	0	-79	3prime_fragment	FALSE	canonical	3	69	junction_3	78.6390409747735	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATATATTATACTCACT	17	True	NA	-108	True	TATAAA	-10	NA	6688896	6666816	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_6668116_6669030_6669190_6670759_6670839_6672349_6672533_6673215_6673441_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166
H1_mix_00021048	chr12	-	1558	10	NNC	ENSG00000089693.11	novel	1555	9	NA	NA	0	30120	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1101.75833652338	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAGAAAAAGAATGAAAG	-10	True	NA	NA	False	NA	NA	NA	6753117	6717875	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_6717903_6747995_6748548_6748769_6748983_6749847_6750008_6750176_6750306_6750712_6750767_6751640_6751677_6751924_6752055_6752284_6752363_6752938
H1_mix_00021051	chr12	-	2923	2	FSM	ENSG00000111665.12	ENST00000604599.1	2917	2	0	-6	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTATGTGTGTGTGTAT	3037	False	NA	-6	True	AAGAAA	-19	NA	6848872	6844792	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6846904_6848060
H1_mix_00021052	chr12	-	1327	5	FSM	ENSG00000111665.12	ENST00000535406.5	1327	5	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_2	16.2230545829076	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTAAACCTTGCACCGA	13	True	NA	-15	True	ATTAAA	-33	NA	6851258	6848828	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6849199_6849322_6849430_6849564_6849859_6850466_6850597_6850832
H1_mix_00021056	chr12	-	1331	9	NNC	ENSG00000215021.10	novel	1379	10	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	488.304064467008	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCAAGGCTTCACGTG	19	True	NA	-25	True	AATAAA	-17	NA	6970645	6965355	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_6965715_6966419_6966501_6967170_6967249_6967675_6967780_6967891_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
H1_mix_00021057	chr12	-	1389	8	FSM	ENSG00000215021.10	ENST00000676496.1	1391	8	0	2	0	-2	multi-exon	FALSE	canonical	1	19	junction_3	644.923630979605	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCAAGGCTTCACGTGTT	8812	False	NA	-23	True	AATAAA	-19	NA	6970724	6965353	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6965713_6966423_6966501_6967170_6967336_6967891_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
H1_mix_00021058	chr12	-	1327	9	NIC	ENSG00000215021.10	novel	1379	10	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	118	junction_1	449.576449978199	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCAAGGCTTCACGTGTT	19	True	NA	-23	True	AATAAA	-19	NA	6970645	6965353	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_6965713_6966423_6966501_6967170_6967249_6967675_6967780_6967891_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
H1_mix_00021059	chr12	-	2940	5	FSM	ENSG00000215021.10	ENST00000678983.1	2940	5	0	0	0	0	multi-exon	FALSE	canonical	3	1404	junction_1	51.7077121907361	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAACCTTGTGCTGAACCT	8825	False	NA	NA	False	NA	NA	NA	6970711	6966464	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6966501_6967170_6967780_6967891_6968022_6968410_6970281_6970416
H1_mix_00021064	chr12	-	447	2	FSM	ENSG00000139178.12	ENST00000543941.1	539	2	92	0	92	0	multi-exon	FALSE	canonical	3	11	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGAGTGTCCCTCCTGGG	-12	True	NA	NA	False	NA	NA	NA	7108509	7101899	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_7102088_7108250
H1_mix_00021066	chr12	-	532	3	FSM	ENSG00000139194.8	ENST00000542784.1	532	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCCCCTTCAAGCCCAGA	6203	False	NA	NA	False	NA	NA	NA	7128561	7124066	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_7124175_7124628_7124731_7128239
H1_mix_00021068	chr12	-	2417	1	FSM	ENSG00000255836.1	ENST00000538078.1	1211	1	-101	-1105	-101	1105	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGATGAGTTCATGCCC	4058	False	NA	NA	False	AATAAA	-25	NA	7440091	7437674	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_7437700_7440100
H1_mix_00021069	chr12	-	1133	5	ISM	ENSG00000173262.12	ENST00000542546.5	3120	8	5134	1488	5083	19	3prime_fragment	FALSE	canonical	3	14	junction_1	348.150380582874	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAGGATATAGGAGAGGAA	NA	False	NA	NA	False	NA	NA	NA	7827682	7814000	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_7814535_7817830_7818035_7819481_7819584_7821220_7821326_7827494
H1_mix_00021070	chr12	-	3858	11	NNC	ENSG00000059804.16	novel	3827	10	NA	NA	0	33080	intron_retention	FALSE	non_canonical	0	0	junction_1	1034.13308621279	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGGGCGTGGTGGTACA	1	True	NA	NA	False	AAAAAG	-2	NA	7936184	7886149	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_7886182_7919227_7921632_7922820_7923025_7924409_7924512_7925843_7925949_7929683_7929872_7930479_7930643_7931244_7931486_7932986_7933148_7933809_7933903_7936019
H1_mix_00021074	chr12	-	700	1	FSM	ENSG00000255581.1	ENST00000388966.4	660	1	-170	130	-170	-130	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGATGCTGTTGGTGTGGC	8575	False	NA	-4	True	AATAAA	-19	NA	8018030	8017330	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_8017300_8018000
H1_mix_00021075	chr12	-	1778	1	FSM	ENSG00000279865.1	ENST00000624929.1	1783	1	69	-64	69	64	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTACCTCTTTTTTTTTC	55	False	NA	NA	False	NA	NA	NA	8082094	8080316	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_8080300_8082100
H1_mix_00021076	chr12	-	2497	3	ISM	ENSG00000226091.7	ENST00000538304.1	2157	7	-296	4347	12	-4335	5prime_fragment	FALSE	canonical	3	10	junction_1	11.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8396791	8388451	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_8390512_8390901_8390970_8396422
H1_mix_00021077	chr12	-	581	3	FSM	ENSG00000003056.8	ENST00000537621.1	581	3	0	0	0	0	multi-exon	FALSE	canonical	3	674	junction_1	28.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAAATCTGATTTAGCTTT	6088	False	NA	NA	False	NA	NA	NA	8943886	8942178	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_8942543_8943404_8943536_8943800
H1_mix_00021078	chr12	-	412	3	FSM	ENSG00000003056.8	ENST00000543834.1	412	3	0	0	0	0	multi-exon	FALSE	canonical	3	726	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGGGGATAACTTTTTA	4495	False	NA	NA	False	NA	NA	NA	8945479	8943295	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_8943536_8943800_8943911_8945417
H1_mix_00021079	chr12	-	648	3	FSM	ENSG00000003056.8	ENST00000540837.1	648	3	0	0	0	0	multi-exon	FALSE	canonical	3	730	junction_1	34	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGACAGTTGTGCATTAA	-4	True	NA	NA	False	AATATA	-43	NA	8949610	8945236	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_8945585_8946228_8946406_8949487
H1_mix_00021081	chr12	-	239	1	FSM	ENSG00000283429.1	ENST00000635744.1	85	1	0	-154	0	154	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAGAAAAACAT	947	False	NA	NA	False	AATAAA	-43	NA	9239551	9239312	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_9239300_9239600
H1_mix_00021082	chr12	-	999	9	NNC	ENSG00000256673.1	novel	400	4	NA	NA	5877	1294	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_7	5.7227615711298	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTCTATGACTTTTTTT	NA	False	NA	-3	True	ATTAAA	-17	NA	9408974	9397060	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_9397215_9397614_9397690_9398381_9398485_9399794_9399864_9400235_9400327_9401746_9401860_9402426_9402557_9407307_9407453_9408855
H1_mix_00021083	chr12	-	9613	9	NNC	ENSG00000214826.5	novel	2947	27	NA	NA	18607	3184	intron_retention	FALSE	canonical	3	23	junction_3	43.3214727358154	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGTCTTCACCTTTGT	NA	False	NA	NA	False	NA	NA	NA	9429622	9415488	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_9418930_9419111_9419574_9419980_9420082_9420172_9424641_9425470_9425603_9425715_9426121_9427632_9427701_9427820_9427866_9429131
H1_mix_00021084	chr12	-	4336	26	NNC	ENSG00000214826.5	novel	2947	27	NA	NA	11	962	intron_retention	FALSE	canonical	3	14	junction_8	46.3016198420746	37	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGAGTTTTTCATTGATA	1572	False	NA	NA	False	ATTAAA	-18	NA	9448218	9417710	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_9418700_9418774_9418930_9419111_9419191_9419488_9419574_9419980_9420082_9420172_9420256_9420514_9420665_9421387_9421966_9424527_9424641_9425470_9425603_9425715_9425825_9426081_9426121_9427632_9427701_9427820_9427866_9429131_9429212_9429559_9429607_9430587_9430741_9432365_9432575_9432968_9433057_9433307_9433416_9434094_9434141_9436946_9437105_9437402_9437490_9438010_9438260_9443534_9443683_9447981
H1_mix_00021085	chr12	-	794	6	NNC	ENSG00000111196.10	novel	1057	6	NA	NA	0	44480	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	381.847299322648	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACCAATCTGGGTCCAAAC	9	True	NA	NA	False	AAAAAG	-31	NA	10613591	10559712	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_10559741_10606014_10606375_10607853_10607937_10609830_10609942_10610621_10610681_10613438
H1_mix_00021086	chr12	-	2220	7	NNC	ENSG00000256667.6	novel	2353	7	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	3	56	junction_1	19.8697145313051	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTATCTGTGTGGACAG	1446	False	NA	-6	True	AATAAA	-21	NA	10598209	10588064	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_10589056_10589142_10589546_10592279_10592387_10593780_10594006_10595690_10595928_10596891_10596982_10598042
H1_mix_00021090	chr12	-	2214	11	NNC	ENSG00000060138.13	novel	1931	10	NA	NA	-250	30553	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1220.18449834441	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGTGACAGGTGCCTA	476	False	NA	NA	False	AGTAAA	-37	NA	10723573	10668535	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_10668567_10699086_10699655_10701253_10701354_10701959_10702135_10704050_10704149_10709907_10710115_10713210_10713334_10715693_10715784_10718087_10718122_10719079_10719144_10722849
H1_mix_00021096	chr12	-	680	5	FSM	ENSG00000275778.2	ENST00000535024.6	680	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	29.9280386928379	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCTGCAGGAAGCATCAT	10	True	NA	NA	False	NA	NA	NA	11171600	10847138	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_10847368_10848371_10848408_10973654_10973722_11047019_11047189_11171421
H1_mix_00021097	chr12	-	4548	1	FSM	ENSG00000212127.6	ENST00000537503.2	1854	1	-2696	2	-2696	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAAATTTTTTGCTGTTT	NA	False	NA	-4	True	AATAAA	-16	NA	10941959	10937411	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_10937400_10942000
H1_mix_00021099	chr12	-	221	1	FSM	ENSG00000212125.2	ENST00000390674.2	928	1	911	-204	911	204	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGTGGCAATAACATAATC	NA	False	NA	NA	False	AAAAAG	-44	NA	10964441	10964220	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_10964200_10964400
H1_mix_00021100	chr12	-	581	1	FSM	ENSG00000212126.3	ENST00000506868.1	1000	1	422	-3	422	3	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTATTCTAGGAGAAAAC	500	False	NA	NA	False	NA	NA	NA	10986490	10985909	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_10985900_10986500
H1_mix_00021103	chr12	-	1021	1	FSM	ENSG00000256436.1	ENST00000390675.2	1021	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTCTTCTAGCAGAAAAC	NA	False	NA	NA	False	NA	NA	NA	11031407	11030386	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_11030400_11031400
H1_mix_00021105	chr12	-	1027	1	FSM	ENSG00000255374.3	ENST00000531678.1	1027	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTGTGTATCTTCTAGCA	69	False	NA	NA	False	NA	NA	NA	11092313	11091286	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_11091300_11092300
H1_mix_00021106	chr12	-	476	2	FSM	ENSG00000197870.13	ENST00000539835.1	476	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCGTCCGGGAAAGCCAGAA	1166	False	NA	NA	False	NA	NA	NA	11268739	11267779	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_11268149_11268632
H1_mix_00021107	chr12	-	8600	16	NNC	ENSG00000070018.9	novel	10252	23	NA	NA	-29724	5605	intron_retention	FALSE	non_canonical	0	0	junction_1	66.4408174409543	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTTTAAATTATGTAGAA	NA	False	NA	NA	False	NA	NA	NA	12164952	12110419	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_12110449_12116024_12121421_12124564_12124663_12125295_12125433_12126690_12126922_12130782_12130894_12131820_12132058_12135174_12135301_12138324_12138535_12147365_12147557_12148941_12149154_12150835_12151039_12158828_12159156_12159779_12159965_12162192_12162420_12164272
H1_mix_00021108	chr12	-	7918	17	NNC	ENSG00000070018.9	novel	7812	24	NA	NA	-29724	5605	intron_retention	FALSE	non_canonical	0	0	junction_1	71.6647740786922	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTTTAAATTATGTAGAA	NA	False	NA	NA	False	NA	NA	NA	12164952	12110419	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_12110449_12116024_12120404_12121085_12121421_12124564_12124663_12125295_12125433_12126690_12126922_12130782_12130894_12131820_12132058_12135174_12135301_12138324_12138535_12147365_12147557_12148941_12149154_12150835_12151039_12158828_12159156_12159779_12159965_12162192_12162420_12164272
H1_mix_00021109	chr12	-	1474	2	FSM	ENSG00000205791.4	ENST00000381800.4	1543	2	66	3	66	-3	multi-exon	FALSE	canonical	3	10	junction_1	0	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATAGTCTGTCGCATCAAC	2	True	NA	-2	True	AATAAA	-17	NA	12357001	12355405	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_12356806_12356927
H1_mix_00021110	chr12	-	1906	4	FSM	ENSG00000183150.8	ENST00000651487.1	1910	4	0	4	0	-3	multi-exon	FALSE	canonical	2	7	junction_2	62.9444199274249	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGTCTTTGATTAATGAT	-12	True	NA	NA	False	CATAAA	-14	NA	12696183	12660893	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_12662471_12684350_12684508_12695458_12695512_12696064
H1_mix_00021112	chr12	-	4194	10	NIC	ENSG00000121316.11	novel	1960	11	NA	NA	-44	-17	intron_retention	FALSE	canonical	3	110	junction_5	10.9341463112378	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTGTCACTTTCATTT	432	False	NA	-23	True	AATAAA	-6	NA	14567927	14503677	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_14506269_14506932_14507119_14511259_14511401_14511510_14511712_14535658_14535804_14536569_14536711_14540763_14540903_14542207_14542292_14553192_14553413_14567581
H1_mix_00021113	chr12	-	857	6	FSM	ENSG00000121316.11	ENST00000541618.1	857	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_5	49.0526248023488	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGACCCTGCAGAATA	73	True	NA	NA	False	AATACA	-7	NA	14567728	14511510	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_14511712_14535658_14535804_14536569_14536711_14540763_14540903_14542207_14542292_14567581
H1_mix_00021114	chr12	-	663	3	Antisense	novelGene_ENSG00000214772.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	62	junction_1	35	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	195	False	NA	-1	True	AATAAA	-22	NA	14710058	14705456	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr12_-_14705913_14708056_14708216_14710010
H1_mix_00021115	chr12	-	1788	2	FSM	ENSG00000197837.4	ENST00000358064.3	1918	2	130	0	130	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGAAACTCCTATTTTTC	4492	False	NA	NA	False	GATAAA	-18	NA	14771001	14767998	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_14769464_14770678
H1_mix_00021116	chr12	-	324	2	FSM	ENSG00000084463.8	ENST00000543316.1	554	2	0	230	0	-230	multi-exon	FALSE	canonical	3	1457	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCAGCAGTGATAGGAGGA	10	True	NA	NA	False	NA	NA	NA	14803476	14801229	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_14801429_14803351
H1_mix_00021117	chr12	-	300	1	FSM	ENSG00000256283.1	ENST00000428182.2	611	1	228	83	228	-83	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCAAAGCCAGTTTAGAT	1296	False	NA	NA	False	NA	NA	NA	15255595	15255295	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_15255300_15255600
H1_mix_00021118	chr12	-	3413	5	NIC	ENSG00000048540.16	novel	2403	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	16	junction_4	33.0633860939862	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTTTTTTACATTTGGA	3735	False	NA	-13	True	AATAAA	-20	NA	16606440	16548423	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_16551328_16560412_16560539_16600654_16600869_16606065_16606133_16606338
H1_mix_00021119	chr12	-	2403	5	FSM	ENSG00000048540.16	ENST00000453727.6	2403	5	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_4	36.4648803645371	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCTTCATGGTTAGGAG	3735	False	NA	NA	False	AAGAAA	-37	NA	16606440	16549374	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_16551328_16560412_16560539_16600713_16600869_16606065_16606133_16606338
H1_mix_00021120	chr12	-	3391	5	FSM	ENSG00000048540.16	ENST00000536172.5	587	5	0	-2804	0	0	multi-exon	FALSE	canonical	0	0	junction_4	41.0327613011847	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTTTTTTACATTTGGA	2990	False	NA	-13	True	AATAAA	-20	NA	16607185	16548423	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_16551328_16560412_16560539_16600713_16600869_16606065_16606133_16607046
H1_mix_00021121	chr12	-	311	2	Intergenic	novelGene_292	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	11	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATCCACAAAAGAAGTAAAAA	NA	False	NA	NA	False	NA	NA	NA	17027004	17022239	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_-_17022333_17026786
H1_mix_00021123	chr12	-	273	1	FSM	ENSG00000200247.1	ENST00000363377.1	107	1	10	-176	10	176	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTGTAATCAAATATTTT	NA	False	NA	NA	False	ATTAAA	-7	NA	19446045	19445772	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_19445800_19446000
H1_mix_00021124	chr12	-	590	1	FSM	ENSG00000245205.3	ENST00000359165.5	1405	1	-54	869	-54	-869	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACACTTAAATTAAGAAAAT	8	True	NA	NA	False	NA	NA	NA	19457702	19457112	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_19457100_19457700
H1_mix_00021125	chr12	-	559	2	FSM	ENSG00000084453.17	ENST00000430803.1	559	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	350	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAACTGAGAAAAGAATTG	8257	False	NA	NA	False	CATAAA	-32	NA	21395397	21334642	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_21334710_21394905
H1_mix_00021126	chr12	-	3421	16	NNC	ENSG00000004700.16	novel	2572	16	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_9	101.681507113579	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTATGTTTTTATATTT	-48	True	NA	-1	True	AATAAA	-23	NA	21501643	21468909	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_21470347_21470968_21471099_21471427_21471648_21473550_21473643_21474840_21474980_21475467_21475586_21475675_21475825_21476910_21476993_21477802_21477835_21483375_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501169_21501216_21501412
H1_mix_00021127	chr12	-	2465	15	NIC	ENSG00000004700.16	novel	3745	15	NA	NA	0	-35	combination_of_known_splicesites	FALSE	canonical	2	2	junction_14	90.785348993308	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTCACTGAGTGATACT	2	True	NA	NA	False	NA	NA	NA	21501593	21469836	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_21470347_21470968_21471099_21471427_21471648_21473550_21473643_21474840_21474980_21475467_21475586_21475675_21475825_21476910_21476993_21477802_21477970_21483375_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501480
H1_mix_00021129	chr12	-	1332	9	NNC	ENSG00000111716.14	novel	1303	8	NA	NA	0	12851	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3867.66940280255	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGCTGGGAAAACTGGCTA	-2	True	NA	NA	False	NA	NA	NA	21657842	21622490	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_21622520_21635341_21635710_21637070_21637195_21638352_21638471_21641951_21642126_21643934_21644109_21646898_21647017_21654542_21654678_21657750
H1_mix_00021130	chr12	-	1332	9	NNC	ENSG00000111716.14	novel	1303	8	NA	NA	0	12851	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3867.66940280255	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGCTGGGAAAACTGGCTA	-2	True	NA	NA	False	NA	NA	NA	21657842	21622490	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_21622521_21635342_21635710_21637070_21637195_21638352_21638471_21641951_21642126_21643934_21644109_21646898_21647017_21654542_21654678_21657750
H1_mix_00021132	chr12	-	1885	2	FSM	ENSG00000111728.11	ENST00000381424.3	1036	2	-164	-685	-121	-2	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTCACTTTTATGAATAAA	88	False	NA	NA	False	AATATA	-27	NA	22334835	22324413	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_22325460_22333996
H1_mix_00021133	chr12	-	4326	24	NIC	ENSG00000111731.13	novel	4436	25	NA	NA	19	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_22	37.2036748393233	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAATATTCCTAAATCTC	-12	True	NA	-35	True	AATAAA	-18	NA	22544523	22448582	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_22449892_22453895_22454043_22456970_22457162_22469708_22469796_22470823_22470912_22471398_22471489_22471966_22472066_22472285_22472348_22472743_22472808_22474750_22474892_22478312_22478478_22482556_22482744_22484696_22484889_22490122_22490219_22493222_22493338_22506710_22506820_22513293_22513380_22517985_22518138_22523425_22523625_22524471_22524628_22525609_22525706_22527720_22527893_22544060_22544180_22544319
H1_mix_00021136	chr12	-	1696	3	FSM	ENSG00000133703.14	ENST00000686969.1	2957	3	0	1261	0	-1228	multi-exon	FALSE	canonical	0	0	junction_1	40	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATTCATTCACTTATTTA	-15	True	NA	NA	False	AATAAA	-43	NA	25250929	25233818	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_25235227_25245273_25245396_25250763
H1_mix_00021137	chr12	-	228	1	FSM	ENSG00000241846.1	ENST00000480211.1	153	1	-117	42	-117	-42	mono-exon	FALSE	NA	NA	NA	NA	NA	2661	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTCCAAAAGGAGACAATG	NA	False	NA	NA	False	AATACA	-10	NA	25409562	25409334	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_25409300_25409600
H1_mix_00021138	chr12	-	2795	9	NIC	ENSG00000152936.11	novel	1285	8	NA	NA	-4085	1220	combination_of_known_junctions	FALSE	canonical	1	1	junction_8	8.42522254898943	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGATTATCATGTTCACA	NA	False	NA	16	True	TTTAAA	-25	NA	25557368	25496292	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_25497795_25503737_25503801_25518794_25518968_25519857_25520076_25526098_25526219_25526768_25526956_25546373_25546555_25549325_25549547_25557238
H1_mix_00021139	chr12	-	1121	2	FSM	ENSG00000246695.9	ENST00000663439.1	1119	2	-2	0	-2	0	multi-exon	FALSE	canonical	1	2	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATCCCTCATAATAGGCT	2999	False	NA	NA	False	AAAAAG	-15	NA	25956764	25945140	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_25946136_25956638
H1_mix_00021140	chr12	-	3082	4	FSM	ENSG00000246695.9	ENST00000537801.2	3082	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	29.5334085777823	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGGTGGTGCGCACCTG	698	False	NA	NA	False	AATACA	-12	NA	25959065	25952540	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_25955242_25956226_25956348_25956638_25956765_25958931
H1_mix_00021141	chr12	-	2999	4	FSM	ENSG00000246695.9	ENST00000663256.1	2999	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	29.5334085777823	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGGTGGTGCGCACCTG	1	True	NA	NA	False	AATACA	-12	NA	25959379	25952540	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_25955242_25956226_25956348_25956638_25956762_25959325
H1_mix_00021142	chr12	-	741	3	FSM	ENSG00000246695.9	ENST00000546134.5	741	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGCCTCCTTCAATATTT	1717	False	NA	-1	True	AATAAA	-36	NA	25958046	25954654	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_25955242_25956638_25956765_25958018
H1_mix_00021144	chr12	-	698	4	FSM	ENSG00000246695.9	ENST00000500102.6	698	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	31.8852107828483	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGATTGTCAATGAATCAGA	2178	False	NA	NA	False	AATAAA	-18	NA	25957585	25954920	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_25955242_25956226_25956348_25956638_25956762_25957452
H1_mix_00021145	chr12	-	2577	18	FSM	ENSG00000123104.12	ENST00000451599.6	2577	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	18.3815764541885	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTCAGAACACAATATGTG	108	False	NA	NA	False	AATAAA	-25	NA	26494233	26387541	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_26387595_26398875_26399042_26400127_26400259_26411319_26411413_26415302_26415499_26419048_26419214_26427912_26428089_26436220_26436347_26439126_26439320_26443542_26443651_26475295_26475419_26476911_26477008_26481130_26481242_26483697_26483899_26486103_26486361_26486816_26486934_26487067_26487252_26494152
H1_mix_00021147	chr12	-	2639	17	NNC	ENSG00000064102.15	novel	2634	17	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_8	94.6726060893541	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGGAGAATTACTTTAGA	30	True	NA	-19	True	AATAAA	-27	NA	26937968	26905180	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_26905537_26906301_26906438_26911177_26911318_26913456_26913688_26913973_26914129_26914407_26914579_26916001_26916181_26917351_26917460_26917643_26917734_26922615_26922701_26924354_26924484_26925760_26925852_26928204_26928286_26928702_26928906_26934555_26934631_26936578_26936815_26937795
H1_mix_00021154	chr12	-	484	1	FSM	ENSG00000278733.1	ENST00000619739.1	566	1	40	42	40	-42	mono-exon	FALSE	NA	NA	NA	NA	NA	227	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACTGTGAAGGTTTTAAA	5239	False	NA	NA	False	CATAAA	-4	NA	28186150	28185666	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_28185700_28186200
H1_mix_00021155	chr12	-	2409	1	FSM	ENSG00000247934.4	ENST00000617468.1	2409	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTTTTGTGACTGGCTT	651	False	NA	-5	True	TATAAA	-18	NA	28190738	28188329	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_28188300_28190700
H1_mix_00021156	chr12	-	846	1	FSM	ENSG00000244712.1	ENST00000463466.1	464	1	-270	-112	-270	112	mono-exon	FALSE	NA	NA	NA	NA	NA	199	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAGGAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	AATAAA	-8	NA	28565411	28564565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_28564600_28565400
H1_mix_00021157	chr12	-	645	6	FSM	ENSG00000087502.19	ENST00000548909.5	645	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	183.177509536515	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGATAAAAAAACCCAAACTG	NA	False	NA	21	True	AAAAAG	-9	NA	29350068	29341017	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_29341219_29341733_29341762_29343119_29343283_29345442_29345541_29349078_29349178_29350012
H1_mix_00021158	chr12	-	767	7	FSM	ENSG00000087502.19	ENST00000551467.5	765	7	0	-2	0	0	multi-exon	FALSE	canonical	1	1	junction_5	182.090636771911	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGATAAAAAAACCCAAACTG	NA	False	NA	21	True	AAAAAG	-9	NA	29357668	29341017	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_29341219_29341733_29341817_29343119_29343283_29345442_29345541_29349078_29349159_29356381_29356478_29357622
H1_mix_00021159	chr12	-	693	9	FSM	ENSG00000087502.19	ENST00000552155.5	693	9	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	173.933895489062	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTGAAAAAATTGCTATAGA	6	True	NA	NA	False	NA	NA	NA	29381161	29349100	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_29349178_29350012_29350069_29357622_29357725_29361644_29361686_29366876_29366948_29368240_29368288_29370113_29370223_29371527_29371671_29381114
H1_mix_00021160	chr12	-	8632	18	FSM	ENSG00000133687.16	ENST00000256062.9	8805	18	173	0	173	0	multi-exon	FALSE	canonical	1	3	junction_17	33.406482598214	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTCTGGTTTCAATCTC	172	False	NA	-26	True	ATTAAA	-43	NA	29784586	29500839	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_29506987_29512042_29512121_29514481_29514605_29516348_29516487_29517426_29517572_29518471_29518608_29520617_29520721_29536208_29536318_29556856_29557001_29572104_29572219_29583406_29583575_29604177_29604300_29633146_29633337_29751665_29751873_29755708_29755886_29758703_29758778_29767897_29768076_29784307
H1_mix_00021162	chr12	-	6128	24	NNC	ENSG00000133704.10	novel	5208	25	NA	NA	14	0	intron_retention	FALSE	canonical	3	19	junction_12	49.4245142484542	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAACTTTTGTGTGTGA	25	True	NA	-11	True	AATAAA	-21	NA	30695855	30628987	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_30632012_30634082_30634287_30636981_30637188_30639514_30639736_30649136_30649233_30652191_30652290_30652966_30653093_30656683_30656751_30661140_30661267_30662326_30662488_30663488_30663655_30665219_30665307_30665728_30665846_30666174_30666252_30669182_30669283_30670961_30671097_30673989_30674075_30674658_30674754_30676497_30676588_30680481_30680639_30681658_30681818_30684300_30684458_30690495_30690578_30695563
H1_mix_00021165	chr12	-	4947	17	NIC	ENSG00000110888.18	novel	4484	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	49	junction_16	32.9141283303994	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCAGTGTTCCTATTTAA	56	False	NA	-6	True	AATAAA	-14	NA	30754888	30709552	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_30710471_30711565_30711630_30713784_30713886_30714958_30716677_30719078_30719226_30720810_30720916_30723258_30723315_30724369_30724452_30725965_30726089_30728647_30729326_30730238_30730283_30731342_30731511_30734967_30735207_30741019_30741107_30751070_30751134_30753343_30753560_30754750
H1_mix_00021166	chr12	-	4684	18	NIC	ENSG00000110888.18	novel	3412	19	NA	NA	1	0	intron_retention	FALSE	canonical	3	14	junction_4	43.843619556083	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTCAGTGTTCCTATTTA	6	True	NA	-7	True	AATAAA	-13	NA	30754938	30709553	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_30710471_30711565_30711630_30713784_30713886_30714958_30715142_30715453_30716677_30719078_30719226_30720810_30720916_30723258_30723315_30724369_30724452_30725965_30726089_30728647_30729326_30730238_30730283_30731342_30731511_30734967_30735207_30741019_30741107_30751070_30751134_30753343_30753560_30754750
H1_mix_00021172	chr12	-	514	1	FSM	ENSG00000212533.1	ENST00000391231.1	150	1	-394	30	-394	-30	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTATATTTGGCTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	31077410	31076896	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_31076900_31077400
H1_mix_00021173	chr12	-	525	5	ISM	ENSG00000177359.21	ENST00000688317.1	781	7	2627	-5	1011	0	3prime_fragment	FALSE	canonical	2	15	junction_1	6.06217782649107	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTATGACTTTTTTTTCTT	2732	False	NA	1	True	ATTAAA	-21	NA	31116460	31111651	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_31111810_31112980_31113084_31114395_31114465_31114836_31114928_31116356
H1_mix_00021174	chr12	-	624	6	ISM	ENSG00000177359.21	ENST00000688317.1	781	7	1569	4	-47	-2	3prime_fragment	FALSE	canonical	2	15	junction_1	5.71314274283428	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATCTGAGTCTATGACTT	1674	False	NA	-8	True	ATTAAA	-12	NA	31117518	31111660	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_31111810_31112980_31113084_31114395_31114465_31114836_31114928_31116356_31116470_31117419
H1_mix_00021175	chr12	-	3111	5	FSM	ENSG00000139146.14	ENST00000448582.6	3111	5	0	0	0	0	multi-exon	FALSE	canonical	3	2855	junction_1	195.19269325464	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGCTGTTTTGTGGCTTTG	5597	False	NA	-34	True	AATAAA	-24	NA	31298521	31280583	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_31282872_31287633_31287785_31293804_31293932_31295233_31295334_31298076
H1_mix_00021177	chr12	-	417	1	FSM	ENSG00000275769.1	ENST00000621354.1	417	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATGAGAACGTGACTGTT	NA	False	NA	-8	True	AATAAA	-20	NA	31444208	31443791	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_31443800_31444200
H1_mix_00021181	chr12	-	953	1	FSM	ENSG00000257511.1	ENST00000550917.1	1005	1	91	-39	91	39	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCTAGCCTAAACACAATT	212	False	NA	NA	False	NA	NA	NA	32727296	32726343	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_32726300_32727300
H1_mix_00021182	chr12	-	5598	1	FSM	ENSG00000275854.1	ENST00000620106.1	731	1	-4870	3	-4870	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTCTTAATCTTTTTT	NA	False	NA	0	True	AATAAA	-19	NA	32742530	32736932	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_32736900_32742500
H1_mix_00021183	chr12	-	901	3	FSM	ENSG00000057294.16	ENST00000552612.5	901	3	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_2	6	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACAAGAAACAAACTACCAT	NA	False	NA	NA	False	NA	NA	NA	32824139	32820888	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_32821530_32822466_32822632_32824044
H1_mix_00021184	chr12	-	683	1	FSM	ENSG00000273853.1	ENST00000614876.1	543	1	-240	100	-240	-100	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGTAAATATATGAGTAAT	6756	False	NA	NA	False	ATTAAA	-32	NA	33433093	33432410	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_33432400_33433100
H1_mix_00021185	chr12	-	542	3	FSM	ENSG00000015153.15	ENST00000551528.5	527	3	0	-15	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATGTGAAGAGTGTTTT	NA	False	NA	NA	False	AAAAAG	-21	NA	42210836	42161612	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_42161766_42210354_42210455_42210547
H1_mix_00021187	chr12	-	1157	9	NNC	ENSG00000139168.9	novel	1808	8	NA	NA	0	53299	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	185.585517686591	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGTAGGTAGTGCACAC	9	True	NA	NA	False	ACTAAA	-29	NA	42326094	42258786	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_42258816_42312765_42313199_42313689_42313766_42313873_42313987_42317339_42317448_42317786_42317899_42322417_42322447_42324018_42324105_42325923
H1_mix_00021189	chr12	-	6257	8	FSM	ENSG00000139174.12	ENST00000640132.1	4278	8	-370	-1609	-47	0	multi-exon	FALSE	canonical	2	4	junction_7	43.326006706629	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCGACTTAGTCTATTCTC	273	False	NA	-9	True	AATAAA	-10	NA	42484042	42456762	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_42460666_42464394_42465259_42466193_42466381_42468625_42468830_42469449_42469588_42470245_42470360_42472384_42472565_42483375
H1_mix_00021190	chr12	-	5916	8	FSM	ENSG00000139174.12	ENST00000345127.9	5878	8	-44	6	-44	0	multi-exon	FALSE	canonical	0	0	junction_7	44.685750822053	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCGACTTAGTCTATTCTC	262	False	NA	-9	True	AATAAA	-10	NA	42589790	42456762	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_42460666_42464394_42465259_42466193_42466381_42468625_42468830_42469449_42469588_42470245_42470360_42472384_42472565_42589464
H1_mix_00021192	chr12	-	3778	9	FSM	ENSG00000139174.12	ENST00000640055.1	3778	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_8	48.7338114146636	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAATATATGGTAAAAACA	17	False	NA	NA	False	TATAAA	-33	NA	42484298	42458824	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_42460666_42464394_42465259_42466193_42466381_42468625_42468830_42469449_42469588_42470245_42470360_42472384_42472562_42483757_42483986_42484273
H1_mix_00021194	chr12	-	2934	18	ISM	ENSG00000173157.18	ENST00000389420.8	6358	39	108320	22652	-4171	-22652	internal_fragment	FALSE	canonical	2	4	junction_3	3.84293716966143	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAGACTTCAAAAATCTAA	NA	False	NA	NA	False	AAGAAA	-23	NA	43443883	43376517	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_43376654_43377364_43377563_43383557_43383729_43383803_43383978_43399065_43399234_43425513_43425691_43427307_43427470_43428240_43428532_43428634_43428800_43429616_43429725_43430351_43430472_43431331_43431497_43432303_43432469_43432600_43432812_43434244_43434372_43439621_43439752_43439896_43440070_43443790
H1_mix_00021195	chr12	-	13564	9	FSM	ENSG00000129317.15	ENST00000551923.5	3313	9	15	-10266	0	0	multi-exon	FALSE	canonical	2	5	junction_8	14.1901153976985	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGGTTTGAGGAAACTAC	14	True	NA	39	True	AATAAA	-15	NA	43758758	43718991	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_43730703_43731704_43731759_43736380_43736662_43738309_43738392_43742456_43742556_43746045_43746239_43748449_43748610_43754335_43755262_43758700
H1_mix_00021196	chr12	-	925	8	FSM	ENSG00000151239.14	ENST00000546662.5	925	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	76.2509283984966	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATATGATACATTGTTTTT	319	False	NA	NA	False	TATAAA	-35	NA	43806296	43797301	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_43797453_43797707_43797834_43799397_43799503_43800434_43800531_43802285_43802465_43804494_43804573_43805523_43805638_43806220
H1_mix_00021197	chr12	-	582	5	FSM	ENSG00000151239.14	ENST00000546506.5	582	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	85.7594746952195	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGGCCACATTAAAGATGA	5	True	NA	NA	False	NA	NA	NA	43806316	43800473	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_43800531_43802285_43802465_43804494_43804573_43805830_43806003_43806220
H1_mix_00021198	chr12	-	3545	21	NNC	ENSG00000184613.11	novel	3196	21	NA	NA	0	1997	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44.0820541717375	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTTCGCTATGATTCT	914	False	NA	NA	False	NA	NA	NA	44876286	44506277	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_44506305_44508283_44508985_44520004_44520230_44521999_44522177_44523290_44523485_44532580_44532722_44607168_44607265_44610847_44610971_44665483_44665610_44703725_44703855_44711291_44711395_44714649_44714742_44774746_44774850_44776021_44776151_44777041_44777125_44777241_44777315_44779662_44779760_44779848_44780023_44815985_44816137_44875224_44875354_44875814
H1_mix_00021205	chr12	-	1531	4	FSM	ENSG00000134297.7	ENST00000686663.1	2288	4	36	721	19	-346	multi-exon	FALSE	canonical	0	0	junction_2	23.2283351869125	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGCCCAGGTTAGGAACT	3	True	NA	NA	False	NA	NA	NA	45216005	45173535	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_45174643_45176243_45176434_45190793_45190962_45215939
H1_mix_00021206	chr12	-	579	4	FSM	ENSG00000139218.18	ENST00000550629.1	579	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	67.6609192961491	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTTAACATTTTATTAT	5119	False	NA	30	True	AATAAA	-18	NA	45924788	45919130	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_45919310_45922462_45922583_45922935_45923155_45924727
H1_mix_00021209	chr12	-	324	2	FSM	ENSG00000139218.18	ENST00000551391.1	324	2	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGTTTTCTGCCCCTTTT	NA	False	NA	NA	False	CATAAA	-24	NA	45948530	45945083	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_45945314_45948436
H1_mix_00021211	chr12	-	8305	18	FSM	ENSG00000111371.16	ENST00000439706.5	3436	18	-122	-4747	0	9	multi-exon	FALSE	canonical	3	14	junction_17	249.915224380514	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTTTGTTCTTTTGCA	-3	True	NA	-2	True	ATTAAA	-28	NA	46269119	46183053	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_46189072_46197719_46197818_46197918_46198061_46198624_46198744_46201097_46201199_46203009_46203090_46204300_46204418_46204531_46204591_46206079_46206163_46207154_46207237_46207528_46207622_46209053_46209128_46229152_46229269_46229563_46229640_46239678_46239894_46243199_46243315_46254813_46254937_46268525
H1_mix_00021212	chr12	-	586	5	FSM	ENSG00000111371.16	ENST00000551506.1	586	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	341.316202369592	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACCACAGGGAAGTTCGTA	-1	True	NA	NA	False	TTTAAA	-43	NA	46268806	46207582	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_46207622_46209053_46209128_46229152_46229269_46229563_46229640_46268525
H1_mix_00021213	chr12	-	378	1	FSM	ENSG00000274591.1	ENST00000611566.1	368	1	4	-14	4	14	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTGTTATGAATTAAACA	9685	False	NA	NA	False	AATAAA	-32	NA	46239469	46239091	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_46239100_46239500
H1_mix_00021214	chr12	-	4815	17	NNC	ENSG00000134294.14	novel	4795	16	NA	NA	0	19784	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	262.838561430776	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACTAGAAGAGCAAGAGCA	3	True	NA	NA	False	NA	NA	NA	46372771	46338403	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_46338426_46358187_46361210_46362283_46362382_46362493_46362639_46363020_46363146_46363725_46363827_46363923_46364004_46364388_46364557_46364643_46364703_46365106_46365190_46366863_46366946_46367075_46367169_46367266_46367341_46370511_46370628_46370775_46370858_46371177_46371380_46372508
H1_mix_00021216	chr12	-	2802	9	FSM	ENSG00000134294.14	ENST00000551374.5	2802	9	0	0	0	0	multi-exon	FALSE	canonical	3	1000	junction_2	68.0711943482704	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGTCTTGTAGTGCTACAT	7529	False	NA	-26	True	ATTAAA	-20	NA	46365307	46359384	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_46361210_46362283_46362382_46362493_46362639_46363020_46363146_46363725_46363827_46363923_46364004_46364388_46364557_46364643_46364703_46365106
H1_mix_00021218	chr12	-	507	4	FSM	ENSG00000134294.14	ENST00000551405.1	526	4	19	0	19	0	multi-exon	FALSE	canonical	2	7	junction_3	427.90263690081	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTATGTGTAAGTAGTG	409	False	NA	NA	False	NA	NA	NA	46372427	46370511	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_46370628_46370775_46370858_46371177_46371380_46372320
H1_mix_00021220	chr12	-	3599	3	FSM	ENSG00000139211.7	ENST00000429635.1	3058	3	-411	-130	-403	-23	multi-exon	FALSE	canonical	1	1	junction_1	4	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAGCAAATCTCTCTCCA	654	False	NA	-19	True	TATAAA	-8	NA	47080362	47076469	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_47079066_47079146_47079249_47079461
H1_mix_00021221	chr12	-	2152	16	FSM	ENSG00000005175.10	ENST00000380650.4	2149	16	0	-3	0	0	multi-exon	FALSE	canonical	3	44	junction_5	83.6116950883999	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTGTAAGGATCAGCAT	9009	False	NA	-12	True	AATAAA	-18	NA	47705986	47663289	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_47663591_47666979_47667081_47667753_47667852_47668915_47669103_47670106_47670346_47679703_47679775_47681695_47681818_47686779_47686908_47687875_47688002_47689124_47689196_47690517_47690640_47696275_47696404_47697596_47697720_47701463_47701605_47702687_47702847_47705951
H1_mix_00021223	chr12	-	778	1	FSM	ENSG00000276390.1	ENST00000611728.1	517	1	-331	70	-331	-70	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAAAATTTTGAGTCTTG	5768	False	NA	NA	False	AATATA	-5	NA	47700248	47699470	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_47699500_47700200
H1_mix_00021224	chr12	-	1087	4	Fusion	ENSG00000276390.1_ENSG00000005175.10	novel	420	3	NA	NA	-14	-70	multi-exon	FALSE	canonical	2	17	junction_1	180.544238961597	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAAAATTTTGAGTCTTG	8951	False	NA	NA	False	AATATA	-5	NA	47706044	47699470	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr12_-_47700165_47701463_47701605_47702687_47702847_47705951
H1_mix_00021225	chr12	-	2448	1	FSM	ENSG00000280054.1	ENST00000623870.1	2448	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATGTCTTCGGTTATAAA	NA	False	NA	NA	False	NA	NA	NA	47730598	47728150	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_47728200_47730600
H1_mix_00021226	chr12	-	205	3	FSM	ENSG00000079337.16	ENST00000490387.1	699	3	494	0	494	0	multi-exon	FALSE	canonical	3	7	junction_2	2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGAGAGGGCGGGTCCC	8620	False	NA	NA	False	NA	NA	NA	47739230	47738195	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_47738248_47738689_47738755_47739142
H1_mix_00021228	chr12	-	855	8	FSM	ENSG00000079337.16	ENST00000466322.5	855	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	5.3908463611752	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAGCAAGGCAGGGACCG	669	False	NA	NA	False	NA	NA	NA	47758438	47749952	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_47749991_47750340_47750426_47751047_47751217_47751398_47751521_47751722_47751830_47751915_47751970_47757865_47758079_47758371
H1_mix_00021229	chr12	-	6418	11	FSM	ENSG00000061273.18	ENST00000459625.5	6414	11	0	-4	0	0	multi-exon	FALSE	canonical	3	167	junction_8	14.3405020832605	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCTCTGAAAGGGCCCCC	3573	False	NA	-9	True	AATAAA	-20	NA	47793498	47782721	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_47783887_47784078_47785472_47785751_47785886_47786584_47786704_47787711_47787810_47788044_47788165_47789260_47789349_47789522_47789579_47789812_47791309_47791585_47791707_47791870
H1_mix_00021230	chr12	-	4331	24	NIC	ENSG00000061273.18	novel	4213	26	NA	NA	0	0	intron_retention	FALSE	canonical	3	55	junction_23	39.3338192701178	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCTCTGAAAGGGCCCCC	704	False	NA	-9	True	AATAAA	-20	NA	47819866	47782721	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_47783887_47784078_47784218_47785386_47785472_47785751_47785886_47786584_47786704_47787711_47787810_47788044_47788165_47789260_47789349_47789522_47789579_47789812_47789921_47791258_47791309_47791585_47791707_47791870_47792005_47793368_47793589_47794759_47794934_47795183_47795768_47795905_47796017_47796206_47796299_47797016_47797143_47797383_47797500_47798107_47798220_47798561_47798653_47798784_47798973_47819766
H1_mix_00021232	chr12	-	580	4	FSM	ENSG00000061273.18	ENST00000417902.5	576	4	0	-4	0	0	multi-exon	FALSE	canonical	3	55	junction_3	35.1883819210577	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGGTAACACCCTCCTC	3	True	NA	NA	False	NA	NA	NA	47819961	47798113	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_47798220_47798561_47798653_47798784_47798973_47819766
H1_mix_00021233	chr12	-	2571	1	FSM	ENSG00000276814.1	ENST00000616571.1	978	1	-2135	542	-2135	-542	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTTCCTAATTTTTAAAA	NA	False	NA	-71	True	NA	NA	NA	48042896	48040325	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48040300_48042900
H1_mix_00021236	chr12	-	1418	6	NIC	ENSG00000079387.14	novel	562	6	NA	NA	-1125	355	combination_of_known_junctions	FALSE	canonical	2	2	junction_5	88.2392203048055	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTCTTTTATGATGGAGC	7150	False	NA	NA	False	ATTAAA	-15	NA	48099159	48079728	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_48080501_48083590_48083763_48088800_48088961_48096342_48096428_48097993_48098125_48099061
H1_mix_00021238	chr12	-	2575	4	FSM	ENSG00000177981.11	ENST00000536549.5	2610	4	35	0	9	0	multi-exon	FALSE	canonical	1	2	junction_3	13.3666251038423	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGCAATTTCTACTTTT	3	True	NA	0	True	AATAAA	-16	NA	48157560	48147788	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48149999_48151200_48151306_48153367_48153526_48157458
H1_mix_00021242	chr12	-	6731	8	FSM	ENSG00000129315.11	ENST00000618666.4	6915	8	184	0	-95	0	multi-exon	FALSE	canonical	1	2	junction_2	7.01019665507731	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATTGTTGTTTATGTGT	252	False	NA	0	True	AATAAA	-21	NA	48716814	48688457	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48694437_48695758_48695830_48698137_48698184_48699777_48699841_48701012_48701074_48705767_48705897_48714442_48714525_48716514
H1_mix_00021243	chr12	-	1675	6	NNC	ENSG00000172602.11	novel	1653	5	NA	NA	0	58201	intron_retention	FALSE	non_canonical	0	0	junction_1	48.7138583977907	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGGCGCAGTGGCTCAT	13	False	NA	NA	False	ATTAAA	-35	NA	48865855	48798943	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_48798981_48857144_48858242_48860996_48861132_48862008_48862119_48864782_48864871_48865647
H1_mix_00021245	chr12	-	540	3	FSM	ENSG00000174243.10	ENST00000551189.1	587	3	368	-321	0	191	multi-exon	FALSE	canonical	3	181	junction_1	6	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTCACTTTCTGGTAG	NA	False	NA	NA	False	NA	NA	NA	48837332	48836450	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48836795_48836893_48837038_48837280
H1_mix_00021250	chr12	-	1430	7	NNC	ENSG00000134285.11	novel	691	6	NA	NA	0	2694	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	177.733883470016	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCCTGAGTTCTTTGG	-16	True	NA	NA	False	NA	NA	NA	48925520	48918823	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_48919532_48921959_48922202_48923781_48923853_48924222_48924257_48924560_48924649_48925045_48925112_48925299
H1_mix_00021253	chr12	-	3544	6	NNC	ENSG00000134287.10	novel	807	6	NA	NA	0	3463	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	338.991799310839	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	80	False	NA	NA	False	AAGAAA	-29	NA	48957445	48932259	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_48932291_48936208_48939109_48939654_48939780_48939996_48940108_48940947_48941189_48957309
H1_mix_00021254	chr12	-	3551	6	NNC	ENSG00000134287.10	novel	807	6	NA	NA	0	3463	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	338.991799310839	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	80	False	NA	NA	False	AAGAAA	-29	NA	48957445	48932259	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_48932293_48936203_48939109_48939654_48939780_48939996_48940108_48940947_48941189_48957309
H1_mix_00021259	chr12	-	1689	12	FSM	ENSG00000181929.13	ENST00000316299.9	1683	12	0	-6	0	2	multi-exon	FALSE	canonical	1	1	junction_8	104.167220935164	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAGTGTTTGATTTTTAC	-2	True	NA	-24	True	ATTAAA	-23	NA	49018779	49002271	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49003007_49003143_49003291_49003557_49003596_49003756_49003923_49004506_49004634_49004963_49005019_49005119_49005166_49005305_49005392_49005461_49005544_49005742_49005853_49013061_49013111_49018731
H1_mix_00021260	chr12	-	1497	12	FSM	ENSG00000181929.13	ENST00000552212.5	1497	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_11	102.551418266301	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTCAGACAAATTCTGAT	1	True	NA	NA	False	NA	NA	NA	49018748	49002613	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49003007_49003143_49003291_49003557_49003596_49003756_49003923_49004506_49004634_49004963_49005019_49005119_49005166_49005305_49005365_49005461_49005544_49005742_49005853_49013061_49013111_49018523
H1_mix_00021263	chr12	-	888	6	FSM	ENSG00000167548.18	ENST00000681974.1	1344	6	456	0	-238	0	multi-exon	FALSE	canonical	2	5	junction_3	4.93963561409139	8708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGAGGGGGAAGAGAGGT	8220	False	NA	NA	False	NA	NA	NA	49024946	49021721	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49021873_49022042_49022152_49022279_49022354_49022589_49022876_49024577_49024709_49024809
H1_mix_00021265	chr12	-	5333	22	ISM	ENSG00000167548.18	ENST00000692637.1	16611	54	3686	18610	2502	-1168	internal_fragment	FALSE	canonical	2	6	junction_19	4.65596440441155	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCATTTGCCCCATTGCA	9195	False	NA	NA	False	NA	NA	NA	49051638	49040389	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_49041536_49041654_49041706_49041916_49041991_49042088_49042331_49042560_49042646_49042740_49042879_49043075_49043187_49043362_49043429_49043634_49043783_49043867_49043999_49044199_49044305_49044402_49044523_49044743_49044966_49045919_49045968_49046064_49046175_49046259_49046425_49046608_49046791_49047964_49048070_49048658_49048770_49049107_49049219_49049681_49050791_49050885
H1_mix_00021266	chr12	-	3060	11	ISM	ENSG00000167548.18	ENST00000301067.12	20635	55	51	32813	51	523	5prime_fragment	FALSE	canonical	3	12	junction_5	3.07245829914744	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTCGCCTATGTCCCCAC	37	True	NA	NA	False	NA	NA	NA	49060743	49051790	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_49052425_49052563_49052710_49052914_49053073_49053206_49053322_49053475_49053642_49053977_49054141_49054306_49054417_49054527_49054752_49054899_49055027_49055275_49055362_49059612
H1_mix_00021267	chr12	-	380	5	FSM	ENSG00000167550.11	ENST00000550675.1	380	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	29.8538104770564	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATGGGAAAACCCGGTAA	141	False	NA	NA	False	TTTAAA	-43	NA	49069837	49066491	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49066533_49066618_49066702_49066955_49067036_49069034_49069107_49069733
H1_mix_00021268	chr12	-	472	4	FSM	ENSG00000139636.16	ENST00000551272.5	472	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	5.43650214343336	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTCCAGCTGGGGGTGGG	9961	False	NA	NA	False	NA	NA	NA	49100732	49097673	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49097740_49097943_49098106_49100387_49100455_49100555
H1_mix_00021269	chr12	-	485	2	FSM	ENSG00000139636.16	ENST00000549429.1	485	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGACCCTGTCTCAAAAAAA	9386	False	NA	NA	False	NA	NA	NA	49101501	49100758	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49101214_49101471
H1_mix_00021271	chr12	-	863	2	FSM	ENSG00000139636.16	ENST00000551535.1	874	2	11	0	-3	0	multi-exon	FALSE	canonical	3	102	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCACAGCCAGGACCAGAGA	-2	True	NA	NA	False	NA	NA	NA	49110889	49106588	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49107046_49110483
H1_mix_00021273	chr12	-	1887	4	FSM	ENSG00000167552.15	ENST00000295766.9	1887	4	0	0	0	0	multi-exon	FALSE	canonical	3	642	junction_3	1164.84772490752	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTGAAAAGTTGTGGT	299	False	NA	NA	False	NA	NA	NA	49188899	49184958	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49185991_49186309_49186459_49186610_49186834_49188416
H1_mix_00021274	chr12	-	1680	13	FSM	ENSG00000187778.14	ENST00000546244.5	1686	13	0	6	0	0	multi-exon	FALSE	canonical	2	5	junction_12	174.896378051564	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTATTTTATTTTTTTT	-20	True	NA	-6	True	AATAAA	-19	NA	49568145	49558300	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49558730_49558842_49558971_49559213_49559302_49559452_49559536_49559728_49559822_49559938_49559968_49560294_49560371_49563000_49563140_49563437_49563547_49564480_49564591_49564736_49564896_49565528_49565668_49568047
H1_mix_00021275	chr12	-	2067	15	ISM	ENSG00000187778.14	ENST00000550165.5	1936	16	228	-61	0	0	3prime_fragment	FALSE	canonical	3	55	junction_14	149.921697249339	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTTATTTTATTTTTTT	252	False	NA	-7	True	AATAAA	-18	NA	49567873	49558301	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_49558730_49558842_49558971_49559213_49559302_49559452_49559536_49559728_49559822_49559938_49559968_49560294_49560371_49563000_49563140_49563437_49563547_49564480_49564591_49564736_49564896_49565528_49565668_49566076_49566216_49566721_49566842_49567646
H1_mix_00021276	chr12	-	724	8	FSM	ENSG00000187778.14	ENST00000547182.1	724	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	218.390681568419	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCAGGCTCCTGGAAAAA	5050	False	NA	NA	False	NA	NA	NA	49563075	49558572	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49558730_49558842_49558971_49559213_49559302_49559452_49559536_49559728_49559822_49559938_49559968_49560294_49560366_49563000
H1_mix_00021277	chr12	-	1037	10	FSM	ENSG00000187778.14	ENST00000553173.5	1037	10	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_9	178.308167140868	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCACAGGTGAGGAGGCC	25	True	NA	NA	False	NA	NA	NA	49568100	49559737	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49559822_49559938_49559968_49560294_49560371_49563000_49563140_49563437_49563547_49564480_49564591_49564736_49564896_49565528_49565668_49566076_49566216_49568047
H1_mix_00021278	chr12	-	876	7	FSM	ENSG00000187778.14	ENST00000548334.5	876	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	226.990455012246	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCTGTTTAGCAAGGCTG	293	False	NA	NA	False	NA	NA	NA	49567832	49563486	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49563547_49564480_49564591_49564736_49564896_49565528_49565668_49566076_49566216_49566721_49566842_49567683
H1_mix_00021279	chr12	-	5003	13	NNC	ENSG00000167566.17	novel	4882	13	NA	NA	0	36	at_least_one_novel_splicesite	TRUE	canonical	3	32	junction_1	29.8272805777977	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAGGTCGGGGGACACT	-1	True	NA	28	True	NA	NA	NA	49828413	49791109	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_49792052_49792366_49792589_49792677_49792987_49793351_49793434_49793733_49793897_49794764_49797395_49798349_49798464_49801847_49801968_49802957_49802997_49803096_49803166_49803921_49804081_49805979_49806042_49828321
H1_mix_00021280	chr12	-	5318	12	NIC	ENSG00000167566.17	novel	4882	13	NA	NA	0	36	intron_retention	FALSE	canonical	3	118	junction_10	8.68931137843529	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAGGTCGGGGGACACT	-1	True	NA	28	True	NA	NA	NA	49828413	49791109	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_49792589_49792677_49792987_49793351_49793434_49793733_49793897_49794764_49797395_49798349_49798464_49801847_49801968_49802957_49802997_49803096_49803166_49803921_49804081_49805979_49806042_49828321
H1_mix_00021281	chr12	-	367	2	FSM	ENSG00000167566.17	ENST00000491441.1	1911	2	1310	234	1310	-234	multi-exon	FALSE	canonical	3	129	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTAACCCAGACACCCT	NA	False	NA	NA	False	NA	NA	NA	49804080	49802957	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49803166_49803921
H1_mix_00021282	chr12	-	4079	12	FSM	ENSG00000135472.9	ENST00000320634.8	4667	12	0	588	0	-588	multi-exon	FALSE	canonical	1	1	junction_11	2.18560277821297	193	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGAAGCCCCGGAATCTT	-19	True	NA	NA	False	NA	NA	NA	49903900	49867483	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49870654_49887385_49887440_49889106_49889203_49889480_49889569_49890116_49890155_49890682_49890723_49891063_49891115_49897030_49897085_49897518_49897584_49897986_49898091_49901129_49901326_49903777
H1_mix_00021283	chr12	-	3080	17	FSM	ENSG00000161800.13	ENST00000454520.6	3080	17	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_16	45.9127909737581	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGAGGCTGGTTTTCTT	48	True	NA	NA	False	AGTAAA	-17	NA	50025400	49989163	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49990344_49990683_49990793_49991997_49992134_49992244_49992378_49992549_49992656_49994130_49994330_49994413_49994510_49997039_49997205_49999140_49999272_49999615_49999734_50001171_50001253_50002246_50002301_50004234_50004305_50005255_50005393_50006433_50006637_50016630_50016720_50025327
H1_mix_00021284	chr12	-	2971	16	NIC	ENSG00000161800.13	novel	3106	17	NA	NA	2	-9	combination_of_known_junctions	FALSE	canonical	2	4	junction_15	62.2291107298041	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAAAATGAACATGAGGCT	-11	True	NA	NA	False	AGTAAA	-8	NA	50025459	49989172	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_49990344_49990683_49990793_49991997_49992134_49992244_49992378_49992549_49992656_49994130_49994330_49994413_49994510_49997039_49997205_49999140_49999272_49999615_49999734_50001171_50001253_50002246_50002301_50004234_50004305_50005255_50005393_50006433_50006637_50025397
H1_mix_00021291	chr12	-	2043	9	ISM	ENSG00000139624.14	ENST00000547787.5	2132	11	22932	-1	0	0	3prime_fragment	FALSE	canonical	3	472	junction_5	39.3700393700591	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTACTGTCTCAACCTCT	8927	False	NA	-15	True	ATTAAA	-15	NA	50144371	50129797	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_50130695_50134545_50134703_50135731_50135839_50135940_50136070_50137727_50137821_50138566_50138618_50142052_50142111_50143073_50143205_50143951
H1_mix_00021292	chr12	-	2998	10	FSM	ENSG00000139624.14	ENST00000380189.8	2998	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	232.207761378565	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTACTGTCTCAACCTCT	24	True	NA	-15	True	ATTAAA	-15	NA	50167320	50129797	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_50130695_50132961_50134069_50134545_50134703_50135731_50135839_50135940_50136070_50137727_50137821_50138566_50138618_50143073_50143205_50143951_50144058_50167100
H1_mix_00021307	chr12	-	3719	16	NNC	ENSG00000135457.11	novel	3807	15	NA	NA	0	62450	intron_retention	TRUE	canonical	0	0	junction_1	69.5701085237043	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTTTTATTTCAGCACT	-30	True	NA	NA	False	NA	NA	NA	51173135	51031205	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_51031224_51093761_51095279_51095988_51096041_51098775_51098919_51099654_51099780_51101934_51102026_51103669_51103764_51104154_51104204_51106524_51106614_51107235_51107347_51109120_51109274_51110876_51110984_51116314_51116421_51117670_51117748_51118620_51118773_51172300
H1_mix_00021309	chr12	-	2960	11	FSM	ENSG00000184271.18	ENST00000333640.12	5615	11	391	2264	-4	-39	multi-exon	FALSE	canonical	1	3	junction_7	4.94368283772331	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATGATGGAGCCCAGGAA	447	False	NA	-39	True	AATAAA	-42	NA	51217671	51189199	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_51190593_51191595_51191765_51192329_51192472_51195969_51196174_51196798_51196928_51197769_51198024_51198549_51198776_51199746_51199869_51204172_51204369_51206788_51206884_51217641
H1_mix_00021310	chr12	-	556	5	FSM	ENSG00000184271.18	ENST00000549309.5	556	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	3.26917420765551	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGTACAGGCCTCCTCGA	425	False	NA	NA	False	NA	NA	NA	51217693	51197974	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_51198024_51198549_51198687_51199746_51199869_51204172_51204369_51217641
H1_mix_00021313	chr12	-	5375	11	NIC	ENSG00000139629.16	novel	5207	11	NA	NA	973	-2	combination_of_known_junctions	FALSE	canonical	3	14	junction_10	6.49307323229917	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGATTGGATTTACTTT	9057	False	NA	NA	False	TATAAA	-15	NA	51382590	51351253	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_51354493_51355805_51355959_51357348_51357451_51358129_51358262_51359131_51359333_51360720_51360839_51364120_51364356_51365429_51365580_51377194_51377368_51379290_51379885_51382312
H1_mix_00021314	chr12	-	494	3	FSM	ENSG00000139629.16	ENST00000605367.5	494	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	3.5	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGACTCCTACTCGCCAGT	1	True	NA	NA	False	NA	NA	NA	51391404	51382460	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_51382510_51383460_51383583_51391081
H1_mix_00021315	chr12	-	883	5	FSM	ENSG00000170421.13	ENST00000547031.5	883	5	0	0	0	0	multi-exon	FALSE	canonical	3	3165	junction_2	356.968486004017	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGCAGGTGGGTGTCCCA	6165	False	NA	NA	False	NA	NA	NA	52901867	52898468	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_52898900_52899774_52900066_52900587_52900684_52901158_52901220_52901863
H1_mix_00021316	chr12	-	1668	4	FSM	ENSG00000257337.8	ENST00000546566.7	1675	4	3	4	1	0	multi-exon	FALSE	canonical	2	5	junction_1	12.0369800568452	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACCTTGGTTAATTTCCT	-1	True	NA	-9	True	AATAAA	-18	NA	53047068	53038966	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_53040264_53045599_53045654_53045960_53046062_53046852
H1_mix_00021318	chr12	-	659	4	FSM	ENSG00000257337.8	ENST00000607643.1	662	4	0	3	0	-3	multi-exon	FALSE	canonical	0	0	junction_1	15.3260852434302	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCACTGAGTCTGTGAGC	8426	False	NA	NA	False	NA	NA	NA	53046003	53042707	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_53043148_53045064_53045187_53045599_53045654_53045960
H1_mix_00021319	chr12	-	2739	9	NNC	ENSG00000172819.17	novel	2917	10	NA	NA	10	72452	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	94.8877626461916	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATATATATATATTTATA	-17	True	NA	NA	False	NA	NA	NA	53220367	53138114	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_53138148_53210568_53211864_53213084_53213244_53213495_53213701_53214058_53214236_53214445_53214607_53215292_53215435_53215645_53215795_53219949
H1_mix_00021320	chr12	-	2950	11	NNC	ENSG00000172819.17	novel	2917	10	NA	NA	0	72452	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	110.143588102077	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATATATATATATTTATA	-4	True	NA	NA	False	NA	NA	NA	53232209	53138114	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_53138148_53210568_53211864_53213084_53213244_53213495_53213701_53214058_53214236_53214445_53214607_53215292_53215435_53215645_53215795_53227361_53227688_53231168_53231236_53231973
H1_mix_00021321	chr12	-	1510	6	ISM	ENSG00000139631.20	ENST00000267085.8	2645	17	19406	0	9186	0	3prime_fragment	FALSE	canonical	1	2	junction_5	2.8	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTGGTATGTTTTTAA	9163	False	NA	0	True	AATAAA	-19	NA	53161190	53157662	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_53158685_53159622_53159713_53159886_53159939_53160119_53160320_53160762_53160845_53161126
H1_mix_00021322	chr12	-	3103	11	NIC	ENSG00000172819.17	novel	2917	10	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_8	117.106831568444	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATGTGGCTCCCTTTAG	NA	False	NA	-4	True	AATAAA	-15	NA	53232252	53210568	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_53211864_53213084_53213244_53213495_53213701_53214058_53214236_53214445_53214607_53215292_53215435_53215645_53215795_53227361_53227688_53229910_53230054_53231168_53231236_53231973
H1_mix_00021324	chr12	-	1779	7	FSM	ENSG00000172819.17	ENST00000543726.1	1779	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	99.7374330708163	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCCTAGACTTCCCAGGG	NA	False	NA	NA	False	NA	NA	NA	53220413	53211392	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_53211864_53213084_53213244_53213495_53213701_53214058_53214236_53214445_53214607_53215292_53215435_53219949
H1_mix_00021328	chr12	-	2262	14	FSM	ENSG00000094914.14	ENST00000547238.6	2248	14	0	-14	0	0	multi-exon	FALSE	canonical	3	300	junction_11	48.159744047758	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTCCCACCTCTAAGAATA	20	True	NA	-52	True	NA	NA	NA	53321257	53307503	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_53307714_53307844_53307930_53308051_53308134_53308281_53308350_53308434_53308529_53308724_53308816_53308959_53309021_53309156_53309282_53309600_53309722_53314297_53314442_53314750_53314850_53315093_53315427_53315726_53315783_53320564
H1_mix_00021329	chr12	-	2115	15	FSM	ENSG00000094914.14	ENST00000672797.1	2101	15	0	-14	0	0	multi-exon	FALSE	canonical	3	31	junction_6	99.9603237616336	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTCCCACCTCTAAGAATA	9	True	NA	-52	True	NA	NA	NA	53321268	53307503	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_53307714_53307844_53307930_53308051_53308134_53308281_53308350_53308434_53308529_53308724_53308852_53308959_53309021_53309156_53309282_53309600_53309722_53314297_53314442_53314750_53314850_53315093_53315141_53315334_53315427_53315726_53315783_53320564
H1_mix_00021330	chr12	-	2566	12	FSM	ENSG00000094914.14	ENST00000552161.6	2566	12	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_10	51.0242204681283	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTGGGCGGGCCCAGGA	0	True	NA	NA	False	NA	NA	NA	53321277	53307641	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_53307714_53307844_53308134_53308281_53308350_53308434_53308529_53308724_53308816_53308959_53309021_53309156_53309282_53309600_53309722_53314297_53314442_53314750_53314850_53315093_53315783_53320564
H1_mix_00021331	chr12	-	4319	15	FSM	ENSG00000139625.13	ENST00000267079.6	4319	15	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_13	25.0542269031452	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAGAAGCTTATAAAACTA	7907	False	NA	NA	False	NA	NA	NA	53499615	53479668	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_53481281_53481940_53482212_53482298_53482370_53482564_53483190_53483348_53483487_53483606_53483724_53483910_53484021_53484256_53484366_53485055_53485215_53485316_53485476_53486055_53486248_53486438_53486623_53486946_53487156_53487254_53487429_53499426
H1_mix_00021336	chr12	-	6553	11	NIC	ENSG00000170653.19	novel	6660	12	NA	NA	18	-1	intron_retention	FALSE	canonical	1	4	junction_10	39.9150347613528	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATGTCTGATGCTTCAC	22	True	NA	-4	True	ATTAAA	-17	NA	53626345	53512054	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_53517355_53523275_53523385_53524563_53524762_53531743_53531897_53532509_53532624_53533159_53533260_53534501_53534660_53537414_53537553_53543329_53543449_53552540_53552638_53626278
H1_mix_00021338	chr12	-	658	6	NNC	ENSG00000135390.21	novel	632	5	NA	NA	0	-1488	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1805.15761084732	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCAGGCATGGTGACACT	11	True	NA	NA	False	NA	NA	NA	53676082	53634213	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_53634241_53665169_53665429_53669147_53669342_53669870_53669949_53672575_53672646_53676052
H1_mix_00021341	chr12	-	1523	6	FSM	ENSG00000012822.16	ENST00000546443.5	1523	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	42.5882612934597	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACTGTTGTCACAAAATG	8962	False	NA	-14	True	AATATA	-15	NA	53714629	53711118	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_53712122_53712774_53712847_53713099_53713207_53713700_53713901_53714132_53714242_53714597
H1_mix_00021346	chr12	-	2665	4	FSM	ENSG00000123415.16	ENST00000682136.1	2681	4	0	16	0	-16	multi-exon	FALSE	canonical	1	5	junction_3	91.5253456092294	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCCTTTGTCTTCAGTTC	-4	True	NA	-25	True	AATAAA	-5	NA	54188985	54180381	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_54182624_54183655_54183960_54187818_54187903_54188950
H1_mix_00021350	chr12	-	1463	2	ISM	ENSG00000123415.16	ENST00000337581.7	1571	4	5010	2	-31	1	3prime_fragment	FALSE	canonical	3	229	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCCTCATCTGTAAAACAG	5151	False	NA	-33	True	AATAAA	-17	NA	54183964	54181469	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_54182624_54183655
H1_mix_00021353	chr12	-	11501	6	Fusion	ENSG00000283803.1_ENSG00000094916.16	novel	1832	5	NA	NA	0	6766	multi-exon	FALSE	non_canonical	0	0	junction_1	183.602396498521	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCCTCCCTATGTTGCCC	35	True	NA	NA	False	AAAAAG	-5	NA	54259545	54224175	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr12_-_54224208_54230940_54241906_54246114_54246216_54252040_54252228_54257513_54257693_54259508
H1_mix_00021355	chr12	-	11780	6	Fusion	ENSG00000283803.1_ENSG00000094916.16	novel	894	5	NA	NA	6	6766	multi-exon	FALSE	non_canonical	0	0	junction_1	195.35547087297	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCCTCCCTATGTTGCCC	-6	True	NA	NA	False	AAAAAG	-5	NA	54259586	54224175	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr12_-_54224209_54230942_54241906_54246114_54246216_54252040_54252228_54257513_54257693_54259269
H1_mix_00021362	chr12	-	713	6	NIC	ENSG00000135447.17	novel	1828	7	NA	NA	-51	-1	combination_of_known_junctions	FALSE	canonical	3	19	junction_2	93.713606269314	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCCTTAGCCCTGACTT	2377	False	NA	NA	False	AAGAAA	-36	NA	54588567	54580112	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_54580393_54580943_54581051_54582731_54582796_54583210_54583249_54584259_54584321_54588404
H1_mix_00021363	chr12	-	5284	3	Genic_Genomic	ENSG00000179899.8	novel	3061	1	NA	NA	-367	2050	multi-exon	FALSE	non_canonical	3	160	junction_2	62	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGCTCAACATCACTGGA	NA	False	NA	NA	False	AAAAAG	-4	NA	55415154	55409676	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr12_-_55414281_55414430_55414512_55414555
H1_mix_00021365	chr12	-	5041	3	Genic_Genomic	ENSG00000179899.8	novel	3061	1	NA	NA	-367	1814	multi-exon	FALSE	non_canonical	3	284	junction_1	1193.5	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCCAGGCTCAGACTAAA	NA	False	NA	NA	False	NA	NA	NA	55415154	55409912	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr12_-_55414281_55414430_55414512_55414562
H1_mix_00021366	chr12	-	4080	25	FSM	ENSG00000135424.19	ENST00000347027.10	4084	25	4	0	4	0	multi-exon	FALSE	canonical	3	8	junction_21	29.6834865708191	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCTCTGCCTCTTTGAG	9	True	NA	NA	False	ATTAAA	-15	NA	55707880	55684571	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_55685289_55687970_55688097_55688201_55688301_55688843_55688958_55692843_55692976_55693140_55693318_55694020_55694124_55694255_55694331_55694442_55694523_55694614_55694696_55694777_55694971_55695521_55695638_55696282_55696433_55696898_55697051_55697215_55697278_55697450_55697547_55697694_55697823_55697937_55698027_55698382_55698577_55698709_55698918_55699869_55699990_55700898_55701155_55702871_55702952_55703050_55703179_55707476
H1_mix_00021371	chr12	-	1984	12	NIC	ENSG00000185664.15	novel	2516	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	197	junction_6	219.988617286298	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTTTTTCTGTTGCTT	8092	False	NA	-4	True	AATAAA	-15	NA	55966026	55954104	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_55954350_55955273_55955362_55955463_55955670_55955778_55955864_55956102_55956220_55956948_55957060_55957185_55957672_55957922_55958085_55958472_55958608_55961316_55961464_55961621_55961733_55965935
H1_mix_00021372	chr12	-	2128	11	FSM	ENSG00000185664.15	ENST00000449260.6	2127	11	0	-1	0	1	multi-exon	FALSE	canonical	3	53	junction_2	270.894518216962	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTTTTTCTGTTGCTTC	8096	False	NA	-3	True	AATAAA	-16	NA	55966022	55954103	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_55954350_55955273_55955383_55955463_55955670_55955778_55955864_55956102_55956220_55956948_55957672_55957922_55958085_55958472_55958608_55961316_55961464_55961621_55961733_55965935
H1_mix_00021377	chr12	-	377	1	FSM	ENSG00000273890.1	ENST00000615146.1	484	1	159	-52	159	52	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAGAGAGATGGCCAGTT	NA	False	NA	NA	False	NA	NA	NA	56010415	56010038	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56010000_56010400
H1_mix_00021378	chr12	-	3297	28	NIC	ENSG00000139613.12	novel	3839	29	NA	NA	0	-359	combination_of_known_junctions	FALSE	canonical	3	123	junction_1	75.2438741929636	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCTCCACAGTGAGGAGC	11	True	NA	NA	False	NA	NA	NA	56189473	56163703	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_56163766_56164647_56164732_56165317_56165700_56168059_56168195_56169528_56169696_56169775_56169912_56170143_56170209_56171270_56171433_56171678_56171938_56172427_56172491_56172584_56172705_56173695_56173850_56174650_56174765_56178021_56178094_56178403_56178535_56178809_56178848_56178996_56179057_56180976_56181102_56181481_56181598_56181703_56181836_56182003_56182080_56183860_56183931_56184174_56184245_56184843_56184937_56185029_56185112_56186154_56186241_56187186_56187307_56189350
H1_mix_00021380	chr12	-	3734	28	NNC	ENSG00000139613.12	novel	4271	30	NA	NA	0	-358	intron_retention	FALSE	canonical	3	54	junction_11	87.3418775074677	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTCCACAGTGAGGAGCC	712	False	NA	NA	False	NA	NA	NA	56189567	56163702	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_56163766_56164302_56164732_56165317_56165700_56168059_56168195_56169528_56169696_56169775_56169912_56170143_56170209_56171270_56171433_56171678_56171938_56172427_56172491_56172584_56172702_56173695_56173850_56174650_56174765_56178021_56178094_56178403_56178535_56178809_56178848_56178996_56179057_56180976_56181102_56181481_56181598_56181703_56181836_56182003_56182080_56183860_56183931_56184174_56184245_56184843_56184937_56185029_56185112_56186154_56186241_56187186_56187307_56189350
H1_mix_00021383	chr12	-	887	7	NNC	ENSG00000257727.6	novel	1450	6	NA	NA	0	83284	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	618.410866657435	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTCTGGGAGAATTGGGT	-14	True	NA	NA	False	NA	NA	NA	56315988	56226557	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_56226583_56310431_56310596_56310957_56311055_56311210_56311415_56314850_56314967_56315129_56315243_56315820
H1_mix_00021387	chr12	-	3057	12	FSM	ENSG00000062485.19	ENST00000548567.5	3057	12	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_11	337.031989555103	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTGAGCCTATTATTAAA	-15	True	NA	-2	True	AATAAA	-16	NA	56300391	56271700	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56273255_56273586_56273797_56274776_56274879_56275001_56275132_56275995_56276196_56282419_56282609_56282859_56282992_56283791_56283858_56285915_56286024_56286594_56286646_56298608_56298692_56300159
H1_mix_00021401	chr12	-	684	3	FSM	ENSG00000257727.6	ENST00000553164.1	666	3	0	-18	0	0	multi-exon	FALSE	canonical	3	92	junction_2	813	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTTATCCTCATAATTAG	8165	False	NA	-14	True	AATAAA	-29	NA	56316000	56314489	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56314967_56315129_56315243_56315906
H1_mix_00021403	chr12	-	5258	26	FSM	ENSG00000135473.16	ENST00000610546.4	5301	26	43	0	-4	0	multi-exon	TRUE	canonical	2	14	junction_13	23.6272385182865	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCCACTCCTATTCTACG	-53	True	NA	NA	False	NA	NA	NA	56334010	56316222	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56317644_56318236_56318435_56319087_56319182_56319307_56319488_56319620_56319765_56319863_56320022_56322077_56322169_56322422_56322483_56322614_56322759_56323061_56323210_56323310_56323385_56323499_56323599_56323806_56323914_56324036_56324186_56324293_56324494_56324580_56324710_56325008_56325129_56325334_56325455_56326312_56326410_56326616_56326960_56327363_56327632_56327994_56328073_56328237_56328359_56328471_56328642_56332812_56333209_56333861
H1_mix_00021404	chr12	-	2647	13	FSM	ENSG00000135473.16	ENST00000547226.5	2642	13	0	-5	0	0	multi-exon	FALSE	canonical	3	78	junction_12	15.8296048241543	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGAGAACTGCTAGTGTGG	9770	False	NA	-7	True	AATAAA	-29	NA	56324187	56316935	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56317644_56318236_56318435_56319087_56319182_56319307_56319488_56319620_56319765_56319863_56320022_56322077_56322169_56322422_56322483_56322614_56323210_56323310_56323385_56323499_56323599_56323806_56323914_56324048
H1_mix_00021413	chr12	-	5001	22	FSM	ENSG00000170581.14	ENST00000651078.1	4985	22	0	-16	0	0	multi-exon	TRUE	canonical	1	2	junction_8	28.8106650698783	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCATCTCTGATCCTCT	15	True	NA	-7	True	AATAAA	-20	NA	56360100	56341596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56343532_56343824_56344136_56346145_56346204_56346441_56346625_56346818_56346956_56348528_56348624_56348751_56348805_56348923_56349030_56349162_56349262_56349425_56349510_56349588_56349637_56350096_56350433_56350828_56350889_56351097_56351191_56351291_56351451_56354465_56354615_56354777_56355352_56355442_56355533_56355707_56355804_56356131_56356286_56356440_56356579_56360057
H1_mix_00021414	chr12	-	603	6	FSM	ENSG00000170581.14	ENST00000555646.1	603	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	53.1804475347848	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGCACATTGAGGGGCTG	8	True	NA	NA	False	NA	NA	NA	56360107	56355272	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56355352_56355442_56355533_56355707_56355804_56356131_56356282_56356440_56356579_56360057
H1_mix_00021417	chr12	-	551	2	FSM	ENSG00000111602.12	ENST00000555808.1	581	2	30	0	30	0	multi-exon	FALSE	canonical	3	770	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTACTCATCTCTTTCC	NA	False	NA	NA	False	NA	NA	NA	56422191	56421551	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56422017_56422105
H1_mix_00021418	chr12	-	2495	17	FSM	ENSG00000135423.13	ENST00000623608.3	2518	17	23	0	6	0	multi-exon	FALSE	canonical	3	16	junction_14	13.0862523283024	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCAGTCCTTCTTTCTT	-9	True	NA	0	True	AATAAA	-26	NA	56488391	56470943	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56471644_56471772_56471837_56472118_56472196_56472689_56472752_56473227_56473321_56473462_56473595_56474543_56474721_56474845_56474897_56475043_56475111_56475623_56475683_56475944_56475978_56477659_56477719_56477932_56478097_56478182_56478263_56479779_56479902_56480287_56480388_56487936
H1_mix_00021419	chr12	-	1234	8	FSM	ENSG00000135423.13	ENST00000494345.5	1234	8	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	8.43220260764212	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAAATGTGGAAATCTGC	23	True	NA	NA	False	NA	NA	NA	56488359	56475821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56475978_56477659_56477719_56477932_56478097_56478182_56478263_56479051_56479182_56479779_56479902_56480287_56480388_56487936
H1_mix_00021421	chr12	-	8600	29	FSM	ENSG00000076108.12	ENST00000551812.5	8600	29	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_28	48.0032418122963	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAAAGACTCTGTGTATT	-17	True	NA	-8	True	AATAAA	-22	NA	56636379	56595929	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56598784_56598867_56599012_56599128_56599359_56599701_56599849_56599963_56600097_56600200_56600491_56600680_56600833_56600942_56601099_56601179_56601403_56601545_56602193_56602712_56602858_56603358_56603419_56603519_56603701_56604216_56604292_56604584_56604800_56605072_56605328_56605829_56606064_56606246_56606313_56606632_56606734_56609735_56609947_56610113_56610216_56610408_56610518_56611572_56611634_56611772_56612247_56613014_56613234_56613952_56614139_56615013_56615608_56617394_56617533_56636181
H1_mix_00021425	chr12	-	1764	11	NNC	ENSG00000110955.9	novel	1759	10	NA	NA	0	29308	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1361.98986780372	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCACGGTGGCTCACGC	18	False	NA	NA	False	AAAAAG	-1	NA	56645967	56608866	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_56608892_56638177_56638424_56639105_56639308_56639979_56640193_56642457_56642581_56642672_56642832_56643402_56643588_56643836_56643959_56644780_56644956_56645170_56645354_56645836
H1_mix_00021429	chr12	-	2939	8	FSM	ENSG00000110958.16	ENST00000537473.2	2939	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	1370.03792588649	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGCATTTTGGCAGTTT	352	False	NA	-7	True	AATAAA	-32	NA	56687997	56663340	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56664499_56664775_56664801_56665631_56666267_56670274_56670365_56671748_56671848_56672739_56672810_56672951_56673066_56687249
H1_mix_00021430	chr12	-	1547	7	FSM	ENSG00000110958.16	ENST00000414274.7	1547	7	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_3	1103.86291419421	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTGGAAGACTTCTTGG	0	True	NA	-37	True	TTTAAA	-22	NA	56688287	56663612	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56664499_56664775_56664801_56666203_56666267_56671748_56671848_56672739_56672810_56672951_56673066_56687997
H1_mix_00021433	chr12	-	1491	6	FSM	ENSG00000196531.14	ENST00000676873.1	1491	6	0	0	0	0	multi-exon	FALSE	canonical	3	9323	junction_1	510.743771376607	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTCAGTCGGTGACTGG	9844	False	NA	-11	True	AATAAA	-20	NA	56715497	56712434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601
H1_mix_00021435	chr12	-	542	4	FSM	ENSG00000196531.14	ENST00000548084.1	542	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	4807.97732939747	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAGAAGGCACGGAAGG	0	True	NA	-2	True	AGTAAA	-18	NA	56725270	56714380	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56714440_56714601_56714704_56724451_56724524_56724961
H1_mix_00021437	chr12	-	1723	14	NNC	ENSG00000198056.15	novel	1423	13	NA	NA	0	939	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	83.4925500698102	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGGACTTTTTATGTA	15	True	NA	-19	True	AATAAA	-39	NA	56752323	56730356	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_56730634_56731556_56731735_56734146_56734246_56738433_56738526_56739293_56739364_56741434_56741577_56741745_56741838_56742986_56743097_56744064_56744124_56746044_56746182_56746780_56746855_56746925_56747033_56751037_56751196_56752195
H1_mix_00021440	chr12	-	3280	3	FSM	ENSG00000139547.8	ENST00000360752.4	3198	3	-275	193	-275	-193	multi-exon	FALSE	canonical	2	4	junction_2	1	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCACGGGGTGGAAATGG	NA	False	NA	NA	False	NA	NA	NA	56959649	56951630	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56952247_56952826_56952991_56957149
H1_mix_00021441	chr12	-	924	8	FSM	ENSG00000166863.13	ENST00000357616.7	930	8	0	6	0	4	multi-exon	FALSE	canonical	1	2	junction_2	47.151514356619	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAATGATGTGGTGTGTG	36	False	NA	-8	True	AATAAA	-12	NA	57016538	57010005	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57010289_57012377_57012453_57012620_57012738_57012821_57012876_57013358_57013389_57013577_57013672_57015683_57015803_57016386
H1_mix_00021442	chr12	-	1060	9	FSM	ENSG00000166863.13	ENST00000438756.5	1060	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	50.9926465286908	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATATGAATGATGTGGTG	54	False	NA	-12	True	AATAAA	-8	NA	57016520	57010009	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57010289_57012133_57012292_57012377_57012453_57012620_57012738_57012821_57012876_57013358_57013389_57013577_57013672_57015683_57015803_57016386
H1_mix_00021443	chr12	-	5474	2	ISM	ENSG00000166881.10	ENST00000379391.7	5370	8	16935	0	16935	0	3prime_fragment	FALSE	canonical	3	206	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGGTCTTTCTTAATG	2294	False	NA	-3	True	AATAAA	-14	NA	57061828	57055642	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_57060060_57060771
H1_mix_00021444	chr12	-	4018	23	FSM	ENSG00000166888.12	ENST00000553533.2	4018	23	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_10	30.1826738651978	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCCTAAGCCATAAAATAAA	373	False	NA	NA	False	NA	NA	NA	57111433	57095477	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57096762_57096849_57096979_57097067_57097134_57098504_57098598_57098791_57098903_57099014_57099079_57099293_57099441_57099766_57099904_57099995_57100091_57100845_57100900_57102289_57102497_57102828_57102922_57104463_57104587_57104725_57104814_57105150_57105340_57105467_57105600_57106190_57106340_57106527_57106581_57106692_57106832_57107230_57107315_57107604_57107744_57108162_57108300_57111128
H1_mix_00021445	chr12	-	3380	21	FSM	ENSG00000166888.12	ENST00000554764.6	3380	21	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_19	22.7916651432053	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTTGCATGACCACATAG	5	True	NA	-20	True	NA	NA	NA	57111362	57095851	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57096762_57096849_57096979_57097067_57097134_57098504_57098598_57098791_57098903_57099014_57099079_57099293_57099441_57099766_57099904_57099995_57100091_57102289_57102497_57102828_57102922_57104463_57104587_57104725_57104814_57105150_57105340_57105467_57105600_57106190_57106340_57106527_57106581_57106692_57106832_57107230_57107315_57108162_57108300_57111128
H1_mix_00021450	chr12	-	2042	2	FSM	ENSG00000287200.1	ENST00000656936.1	2042	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTAATCCCAGCTGCTC	NA	False	NA	NA	False	AATACA	-14	NA	57462818	57457595	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57459562_57462742
H1_mix_00021451	chr12	-	1668	11	FSM	ENSG00000123329.20	ENST00000552953.5	1673	11	0	5	0	0	multi-exon	FALSE	canonical	3	9	junction_1	3.68917334913934	2062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTCTGATGCAGTTCCT	3227	False	NA	-9	True	CATAAA	-12	NA	57476641	57472268	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57472689_57473602_57473709_57474041_57474177_57474422_57474477_57474625_57474704_57474874_57474974_57475290_57475399_57475482_57475616_57475832_57475932_57476070_57476455_57476589
H1_mix_00021452	chr12	-	345	3	FSM	ENSG00000123329.20	ENST00000546704.1	552	3	53	154	53	-154	multi-exon	FALSE	canonical	3	18	junction_1	1.5	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTTACATGGAAGACCCT	4781	False	NA	NA	False	NA	NA	NA	57475087	57474422	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57474477_57474625_57474704_57474874
H1_mix_00021456	chr12	-	776	7	FSM	ENSG00000135446.17	ENST00000546489.5	776	7	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_6	532.181673240758	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAATCTCTGCCTTTCGAGC	-22	True	NA	NA	False	NA	NA	NA	57752322	57748590	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57748618_57749181_57749318_57749453_57749505_57750655_57750766_57750922_57751091_57751206_57751343_57752174
H1_mix_00021461	chr12	-	956	1	FSM	ENSG00000206749.1	ENST00000384022.1	107	1	-855	6	-855	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57807115	57806159	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57806200_57807100
H1_mix_00021462	chr12	-	4806	9	NNC	ENSG00000175215.11	novel	4785	8	NA	NA	0	1744	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	113.203356840687	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGCATGGTGGTGCACA	-17	True	NA	NA	False	NA	NA	NA	57846729	57818182	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_57818216_57819938_57823728_57823903_57824090_57824226_57824320_57826345_57826403_57826995_57827098_57827551_57827591_57829447_57829597_57846371
H1_mix_00021463	chr12	-	4750	8	NIC	ENSG00000175215.11	novel	4785	8	NA	NA	26	-2	combination_of_known_junctions	FALSE	canonical	3	33	junction_5	109.214636082779	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGAGCTGCCACCAACC	268	False	NA	-12	True	AATAAA	-26	NA	57846678	57819928	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_57823728_57823903_57824090_57824226_57824320_57826345_57826403_57826995_57827098_57827533_57827591_57829447_57829597_57846371
H1_mix_00021466	chr12	-	643	2	FSM	ENSG00000257698.3	ENST00000551421.1	451	2	-101	-91	0	16	multi-exon	FALSE	canonical	2	10	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGTCTTATTTTAAATG	-34	True	NA	86	True	ATTAAA	-17	NA	57936180	57931436	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57931738_57935838
H1_mix_00021467	chr12	-	1012	2	FSM	ENSG00000257698.3	ENST00000547492.1	759	2	-121	-132	0	16	multi-exon	FALSE	canonical	3	98	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGTCTTATTTTAAATG	-34	True	NA	86	True	ATTAAA	-17	NA	57936180	57931436	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57931738_57935469
H1_mix_00021468	chr12	-	3667	19	FSM	ENSG00000139263.12	ENST00000379141.8	3667	19	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_18	81.3051901825295	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCCATTTATACAATAACA	1029	False	NA	-16	True	AATAAA	-21	NA	58919546	58872148	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_58872817_58874054_58874331_58874429_58874574_58876444_58876604_58877399_58877853_58878823_58879106_58880580_58880902_58882868_58883033_58883519_58883592_58885830_58885903_58886809_58886891_58887788_58887933_58888328_58888473_58888818_58888963_58889995_58890140_58890664_58890797_58913981_58914057_58914264_58914337_58919426
H1_mix_00021474	chr12	-	489	3	FSM	ENSG00000185306.13	ENST00000535515.5	489	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGCAAAGATCTTTATGC	NA	False	NA	NA	False	AATAAA	-16	NA	64270573	64266982	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_64267289_64267538_64267684_64270535
H1_mix_00021475	chr12	-	266	1	FSM	ENSG00000277895.1	ENST00000610945.1	1311	1	1064	-19	1064	19	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGAAAACGGCCGTATTG	1049	False	NA	NA	False	ATTAAA	-41	NA	64451837	64451571	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_64451600_64451800
H1_mix_00021477	chr12	-	1506	11	FSM	ENSG00000135677.11	ENST00000541781.5	1846	11	340	0	340	0	multi-exon	FALSE	canonical	3	149	junction_5	12.2865780427261	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAACCCAGTCAGCTG	7057	False	NA	NA	False	NA	NA	NA	64745898	64716608	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_64716820_64720021_64720183_64721594_64721706_64723005_64723114_64728955_64729058_64737003_64737108_64739380_64739500_64740605_64740689_64743140_64743309_64744808_64744908_64745658
H1_mix_00021479	chr12	-	919	8	FSM	ENSG00000135677.11	ENST00000540196.5	907	8	0	-12	0	0	multi-exon	FALSE	canonical	1	2	junction_3	59.8078556030622	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTTTTTGACCCCGGGTA	8065	False	NA	NA	False	NA	NA	NA	64744890	64720038	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_64720183_64721594_64721706_64723005_64723114_64737003_64737108_64739380_64739500_64740605_64740689_64743140_64743309_64744808
H1_mix_00021481	chr12	-	775	1	FSM	ENSG00000241749.4	ENST00000622976.1	1023	1	156	92	133	-92	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCCTGCGGGGAACCAGGC	125	False	NA	NA	False	NA	NA	NA	65826841	65826066	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_65826100_65826800
H1_mix_00021483	chr12	-	859	7	NNC	ENSG00000155957.19	novel	2876	7	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	110.966962050273	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAATCTTTATTTGTATC	13	True	NA	-12	True	AATAAA	-25	NA	66169963	66137828	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_66138166_66138723_66138770_66145840_66145959_66147907_66147942_66152270_66152377_66153339_66153449_66169854
H1_mix_00021484	chr12	-	886	7	FSM	ENSG00000155957.19	ENST00000633367.1	876	7	0	-10	0	0	multi-exon	FALSE	canonical	2	5	junction_6	106.826962888589	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAATCTTTATTTGTATC	-5	True	NA	-12	True	AATAAA	-25	NA	66170027	66137828	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_66138167_66138723_66138770_66145840_66145959_66147907_66147942_66152270_66152377_66153339_66153411_66169854
H1_mix_00021485	chr12	-	5479	10	NIC	ENSG00000155974.13	novel	5147	25	NA	NA	-750	-7318	combination_of_known_junctions	FALSE	canonical	3	34	junction_8	9.78030270429573	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCCTGTGCCACCATTT	NA	False	NA	27	True	NA	NA	NA	67069912	66452713	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_66456343_66462923_66463094_66465274_66465423_66515618_66515765_66517900_66517977_66529830_66529915_66539077_66539224_66541814_66541951_66596846_66596928_67069049
H1_mix_00021487	chr12	-	650	1	FSM	ENSG00000240087.3	ENST00000435879.2	888	1	303	-65	303	65	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAGAATAA	NA	False	NA	NA	False	NA	NA	NA	68553579	68552929	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_68552900_68553600
H1_mix_00021488	chr12	-	887	2	Genic_Genomic	ENSG00000240087.3	novel	888	1	NA	NA	31	65	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAGAATAA	NA	False	NA	NA	False	NA	NA	NA	68553851	68552929	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr12_-_68553749_68553783
H1_mix_00021490	chr12	-	5252	1	FSM	ENSG00000274979.1	ENST00000613291.1	5309	1	-43	100	-43	-100	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGTACAGCTGTACTACA	376	False	NA	NA	False	NA	NA	NA	69331925	69326673	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_69326700_69331900
H1_mix_00021493	chr12	-	1624	3	FSM	ENSG00000236333.4	ENST00000655489.1	3088	3	0	1464	0	-1464	multi-exon	FALSE	canonical	2	3	junction_1	4.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGTTAAAAGTAGTATCTA	2670	False	NA	NA	False	CATAAA	-15	NA	72272236	72261040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_72262111_72264481_72264622_72271822
H1_mix_00021494	chr12	-	447	1	FSM	ENSG00000273987.1	ENST00000617300.1	689	1	20	222	20	-222	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCAAGAGTTGCTTTAAT	NA	False	NA	NA	False	NA	NA	NA	75334466	75334019	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_75334000_75334500
H1_mix_00021497	chr12	-	2400	8	FSM	ENSG00000187109.15	ENST00000547993.5	2481	8	81	0	81	0	multi-exon	FALSE	canonical	3	109	junction_1	804.064217153159	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTGGGAAATTTTTCA	9670	False	NA	-21	True	AATAAA	-21	NA	76057804	76049428	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_76049526_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032
H1_mix_00021499	chr12	-	1339	12	FSM	ENSG00000187109.15	ENST00000548044.5	1339	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_11	676.517663302541	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAATAAATAAATTGCAAAAC	952	False	NA	-32	True	AAAACA	-44	NA	76084666	76049588	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76084566
H1_mix_00021500	chr12	-	818	7	FSM	ENSG00000187109.15	ENST00000548273.5	818	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	799.489142445905	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGGGTTGTACAGGGT	883	False	NA	NA	False	NA	NA	NA	76084735	76053787	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76084566
H1_mix_00021503	chr12	-	942	8	NNC	ENSG00000175183.10	novel	908	6	NA	NA	0	3691	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	824.644685390537	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAATAGTCAACTTAAAGA	-3	True	NA	NA	False	NA	NA	NA	76879019	76855017	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_76855034_76858212_76858237_76858714_76859029_76859546_76859641_76860283_76860414_76863175_76863345_76866148_76866262_76878937
H1_mix_00021505	chr12	-	591	1	FSM	ENSG00000257199.2	ENST00000552481.2	591	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGTCTTATTTTATTTCCT	NA	False	NA	NA	False	NA	NA	NA	76984669	76984078	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_76984100_76984700
H1_mix_00021506	chr12	-	5300	12	FSM	ENSG00000165891.16	ENST00000416496.6	5297	12	0	-3	0	3	multi-exon	FALSE	canonical	3	11	junction_1	25.0905797079829	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGGTTGTATTTTTTGG	-8	True	NA	1	True	AATAAA	-22	NA	77065563	77021244	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_77024186_77027882_77028139_77029830_77030333_77033049_77033123_77033856_77034043_77043064_77043200_77044636_77044796_77046037_77046329_77050575_77050745_77055854_77056131_77064542_77064636_77065344
H1_mix_00021509	chr12	-	364	2	FSM	ENSG00000177425.11	ENST00000552637.1	364	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCTGCCAACGAGCTCAACA	-5	True	NA	NA	False	GGGGCT	-21	NA	79690581	79690053	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_79690392_79690555
H1_mix_00021510	chr12	-	629	5	FSM	ENSG00000058272.19	ENST00000551781.2	629	5	0	0	0	0	multi-exon	FALSE	canonical	3	454	junction_2	27.009257672139	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTATGTTTATTCATGC	NA	False	NA	NA	False	TTTAAA	-7	NA	79798498	79793796	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_79793929_79795637_79795760_79796781_79796951_79797194_79797396_79798493
H1_mix_00021511	chr12	-	989	7	FSM	ENSG00000111052.8	ENST00000261203.7	989	7	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_4	47.016545551067	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAACACCTTCTTTCTCTG	498	False	NA	-5	True	TATAAA	-17	NA	80937780	80797574	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_80797727_80811464_80811684_80845729_80845940_80848098_80848176_80848250_80848323_80889250_80889370_80937640
H1_mix_00021514	chr12	-	5669	13	FSM	ENSG00000072041.18	ENST00000679989.1	5700	13	45	-14	45	0	multi-exon	FALSE	canonical	1	2	junction_12	72.3421653594146	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATATGCTGTTTTGATATA	9195	False	NA	-1	True	AATAAA	-19	NA	84913584	84859490	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_84862007_84863438_84863602_84867033_84868073_84870477_84870671_84872601_84872795_84873086_84873329_84876496_84876608_84883858_84884041_84885434_84885562_84885910_84886069_84891831_84892309_84912522_84912706_84913499
H1_mix_00021518	chr12	-	7585	52	FSM	ENSG00000198707.17	ENST00000676074.1	7596	52	11	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	11.4552436329279	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATAAAAGTATATACTTGA	-6	True	NA	-38	True	AATAAA	-27	NA	88142088	88049015	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_88049415_88050353_88050434_88053651_88053747_88055575_88055718_88058847_88059021_88059897_88060021_88062691_88062779_88063980_88064116_88068521_88068646_88071293_88071450_88071780_88071927_88077221_88077345_88077696_88077919_88079091_88079230_88080181_88080396_88083030_88083231_88083846_88083955_88084585_88084853_88086038_88086174_88086390_88086499_88087779_88087945_88089031_88089488_88090727_88090840_88092680_88092833_88093769_88093976_88096887_88097000_88102837_88103012_88106674_88106906_88106995_88107099_88109065_88109182_88111201_88111352_88111693_88111859_88114419_88114563_88115097_88115183_88117032_88117146_88118482_88118571_88118642_88118744_88120113_88120277_88120996_88121167_88125245_88125370_88126315_88126439_88128945_88129036_88129693_88129877_88130267_88130421_88130544_88130566_88131164_88131219_88136642_88136787_88139144_88139192_88139494_88139565_88140955_88141034_88141205_88141335_88141899
H1_mix_00021521	chr12	-	344	1	FSM	ENSG00000257752.1	ENST00000549191.1	703	1	235	124	235	-124	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGCCCCCATTTCAAAAGG	NA	False	NA	NA	False	ATTAAA	-44	NA	88058343	88057999	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_88058000_88058300
H1_mix_00021523	chr12	-	829	6	FSM	ENSG00000139323.14	ENST00000548715.5	829	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	35.4400902933387	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAGGTGGGCATGACACA	33	True	NA	NA	False	NA	NA	NA	89525997	89425166	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_89425380_89459637_89459719_89466769_89466923_89491935_89492116_89525119_89525205_89525880
H1_mix_00021524	chr12	-	5258	3	FSM	ENSG00000259075.6	ENST00000548729.5	5436	3	174	4	174	-4	multi-exon	FALSE	canonical	1	1	junction_1	49	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATTGTGATTATTTTAGC	6	True	NA	NA	False	AATAAA	-26	NA	89526024	89519411	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_89524441_89525119_89525205_89525880
H1_mix_00021525	chr12	-	6899	21	NIC	ENSG00000070961.16	novel	7062	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	178	junction_11	29.7716307917454	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGGACTGAACTTTTTG	337	False	NA	-11	True	AATAAA	-22	NA	89709300	89588050	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_89591296_89599116_89599300_89601325_89601434_89603042_89603255_89603711_89603926_89604154_89604347_89609936_89610044_89610420_89610509_89611192_89611373_89616801_89617040_89619998_89620241_89621548_89621792_89624182_89624398_89626453_89626616_89627677_89627717_89630504_89630646_89634777_89634904_89634996_89635252_89642157_89642356_89655678_89656108_89709218
H1_mix_00021529	chr12	-	658	5	FSM	ENSG00000102189.17	ENST00000547833.5	661	5	3	0	-1	0	multi-exon	FALSE	canonical	1	1	junction_3	35.507041555162	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCTTCACTTAAGGTAAG	-42	True	NA	NA	False	NA	NA	NA	92929328	92857445	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_92857486_92864859_92864988_92891628_92891722_92905485_92905597_92929042
H1_mix_00021530	chr12	-	3018	2	FSM	ENSG00000177889.10	ENST00000550657.1	3018	2	0	0	0	0	multi-exon	FALSE	canonical	3	2703	junction_1	0	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAGCTTTTGATGACTG	-12	True	NA	-21	True	ATTAAA	-17	NA	93441943	93408370	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_93411300_93441854
H1_mix_00021531	chr12	-	676	4	FSM	ENSG00000177889.10	ENST00000549490.1	676	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	1289.38081608534	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTAAGTATAAAGCACTGT	33	True	NA	NA	False	TTTAAA	-43	NA	93441898	93409762	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_93410080_93410733_93410875_93411125_93411300_93441854
H1_mix_00021533	chr12	-	605	4	FSM	ENSG00000246985.8	ENST00000551626.1	618	4	13	0	13	0	multi-exon	FALSE	canonical	2	3	junction_3	7.48331477354788	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCTTTATTAAGATAACCC	2546	False	NA	NA	False	NA	NA	NA	93571385	93565583	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_93565745_93566743_93566971_93567063_93567160_93571264
H1_mix_00021534	chr12	-	3839	1	Genic_Genomic	ENSG00000258365.1	novel	NA	NA	NA	NA	-3765	-2952	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGGCTTGGGACTTCCCGG	NA	False	NA	NA	False	NA	NA	NA	94286609	94282770	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr12_-_94282800_94286600
H1_mix_00021535	chr12	-	705	5	FSM	ENSG00000173588.16	ENST00000552632.5	705	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	49.012753442344	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTGGATAGAGAATTCTT	4546	False	NA	-62	True	ATTAAA	-27	NA	94331798	94306448	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_94306626_94308782_94308918_94309917_94310108_94312913_94313018_94331699
H1_mix_00021536	chr12	-	879	3	FSM	ENSG00000173588.16	ENST00000546783.1	546	3	-333	0	-333	0	multi-exon	FALSE	canonical	3	99	junction_2	6	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCGGAGAATGATGTTCT	NA	False	NA	NA	False	AAGAAA	-21	NA	94313511	94308826	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_94308918_94309917_94310108_94312913
H1_mix_00021538	chr12	-	1129	1	FSM	ENSG00000213250.5	ENST00000525031.2	1226	1	-78	175	-78	-175	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACAGGCATGTATATGCT	NA	False	NA	NA	False	NA	NA	NA	94425047	94423918	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_94423900_94425000
H1_mix_00021539	chr12	-	1782	2	FSM	ENSG00000184752.14	ENST00000538372.7	1797	2	15	0	15	0	multi-exon	FALSE	canonical	3	3201	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGTCTTTCGTGCCTTTT	8027	False	NA	NA	False	ATTAAA	-15	NA	94995663	94971332	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_94971621_94994169
H1_mix_00021543	chr12	-	2309	14	NNC	ENSG00000120798.17	novel	4058	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_13	41.1533429156866	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTCTAGTCATATTTA	-5	True	NA	-3	True	AATAAA	-20	NA	95073537	95021892	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_95022404_95025149_95025256_95028386_95028525_95031348_95031489_95040475_95040598_95049067_95049234_95051761_95051944_95057552_95057644_95057730_95057879_95058309_95058490_95059905_95059985_95062507_95062739_95067330_95067388_95073379
H1_mix_00021544	chr12	-	2422	15	NNC	ENSG00000120798.17	novel	4058	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_7	51.7600921836229	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTCTAGTCATATTTA	-37	True	NA	-3	True	AATAAA	-20	NA	95073569	95021892	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_95022404_95025149_95025256_95028386_95028525_95031348_95031489_95040475_95040598_95049067_95049234_95051761_95051944_95057335_95057413_95057552_95057644_95057730_95057879_95058309_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
H1_mix_00021545	chr12	-	2106	13	NNC	ENSG00000120798.17	novel	4058	14	NA	NA	0	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	64.7526811971691	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATTTTATAAAACAAATAAA	-37	True	NA	-42	True	NA	NA	NA	95073569	95021931	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_95022404_95025149_95025256_95028386_95028510_95049067_95049234_95051761_95051944_95057335_95057413_95057552_95057644_95057730_95057879_95058309_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
H1_mix_00021546	chr12	-	2023	12	FSM	ENSG00000120798.17	ENST00000330677.7	2014	12	0	-9	0	0	multi-exon	FALSE	canonical	2	7	junction_1	45.1572093216466	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTTCAGTTTTTTTCT	-5	True	NA	-11	True	AATAAA	-26	NA	95073537	95030408	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_95030874_95031348_95031489_95040475_95040598_95049067_95049234_95051761_95051944_95057552_95057644_95057730_95057879_95058309_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
H1_mix_00021547	chr12	-	725	4	FSM	ENSG00000180263.14	ENST00000548069.5	725	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	60.785597709399	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATCTTACTGGTGGAAAGT	NA	False	NA	NA	False	NA	NA	NA	95091787	95081169	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_95081557_95085779_95085909_95089568_95089697_95091706
H1_mix_00021548	chr12	-	321	1	FSM	ENSG00000257666.1	ENST00000552017.1	521	1	244	-44	244	44	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTGTAATCCCAGCACT	NA	False	NA	NA	False	NA	NA	NA	95286594	95286273	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_95286300_95286600
H1_mix_00021549	chr12	-	271	1	FSM	ENSG00000241556.1	ENST00000478358.1	465	1	11	183	11	-183	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTGCCTACATTGCCCA	6465	False	NA	NA	False	NA	NA	NA	95467850	95467579	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_95467600_95467800
H1_mix_00021551	chr12	-	3857	7	NNC	ENSG00000136014.12	novel	3161	6	NA	NA	0	454	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	424.529314522435	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGACTTAGCCCTTTAC	5	True	NA	NA	False	NA	NA	NA	95548798	95516105	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_95516135_95516562_95518354_95520996_95521203_95524679_95524789_95528806_95529003_95532828_95534327_95548770
H1_mix_00021552	chr12	-	4123	7	NNC	ENSG00000136014.12	novel	4008	6	NA	NA	0	454	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	432.796719026381	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGACTTAGCCCTTTAC	2663	False	NA	NA	False	NA	NA	NA	95548819	95516105	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_95516135_95516562_95518354_95520996_95521203_95524679_95524789_95528806_95529003_95532828_95534327_95548525
H1_mix_00021553	chr12	-	3883	7	NNC	ENSG00000136014.12	novel	4008	6	NA	NA	0	454	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	424.529314522435	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGACTTAGCCCTTTAC	2663	False	NA	NA	False	NA	NA	NA	95548819	95516105	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_95516137_95516559_95518354_95520996_95521203_95524679_95524789_95528806_95529003_95532828_95534327_95548770
H1_mix_00021554	chr12	-	4277	7	NNC	ENSG00000136014.12	novel	4008	6	NA	NA	-238	454	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	397.388838405017	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGACTTAGCCCTTTAC	NA	False	NA	NA	False	NA	NA	NA	95551714	95516105	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_95516137_95516559_95518354_95520996_95521203_95524679_95524789_95528806_95529003_95532828_95534327_95551271
H1_mix_00021557	chr12	-	596	2	Antisense	novelGene_ENSG00000257150.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	35	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTTAACTTTGCATGTT	NA	False	NA	NA	False	NA	NA	NA	95571335	95549669	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr12_-_95550207_95571276
H1_mix_00021560	chr12	-	1769	15	FSM	ENSG00000059758.8	ENST00000542666.5	1769	15	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_14	53.3471973901887	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGATCACTGCACACGCC	-3	True	NA	NA	False	NA	NA	NA	96400074	96280543	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_96280886_96282508_96282600_96283602_96283646_96286042_96286149_96286663_96286762_96289166_96289288_96294998_96295123_96297269_96297333_96297626_96297722_96298868_96298984_96300303_96300361_96311051_96311178_96313320_96313455_96323947_96324113_96399985
H1_mix_00021562	chr12	-	3048	10	NIC	ENSG00000185046.20	novel	3328	13	NA	NA	-109	1	intron_retention	FALSE	canonical	1	9	junction_5	12.1146783737236	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCTTGGCATCGTTCTG	NA	False	NA	2	True	AATAAA	-19	NA	98895409	98743972	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_98745850_98751354_98751523_98773041_98773180_98781116_98781204_98782125_98782138_98798933_98799006_98800996_98801126_98829173_98829354_98832028_98832137_98895132
H1_mix_00021567	chr12	-	548	1	FSM	ENSG00000279148.1	ENST00000623555.1	1293	1	675	70	675	-70	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTCTGGAGGAAAAAAAGT	NA	False	NA	NA	False	AATAAA	-11	NA	100026865	100026317	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_100026300_100026900
H1_mix_00021568	chr12	-	712	4	FSM	ENSG00000111647.13	ENST00000548712.5	713	4	0	1	0	-1	multi-exon	FALSE	canonical	3	7	junction_1	80.1720372421429	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTAAGGCTAAGTATATC	NA	False	NA	NA	False	TATAAA	-44	NA	100048196	100028455	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_100028611_100039595_100039790_100047529_100047639_100047942
H1_mix_00021569	chr12	-	2350	1	FSM	ENSG00000280088.1	ENST00000623268.1	1750	1	-600	0	-600	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGGATGTTTTTCAGATA	NA	False	NA	-8	True	AATAAA	-17	NA	100034674	100032324	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_100032300_100034700
H1_mix_00021571	chr12	-	3048	7	FSM	ENSG00000238105.7	ENST00000304813.13	3105	7	0	57	0	-2	multi-exon	FALSE	canonical	2	4	junction_6	4.52462398683274	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGTATGGGATTTTAAAAA	NA	False	NA	-5	True	AATAAA	-19	NA	100161278	100156413	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_100157059_100157164_100157446_100157527_100157740_100157996_100158078_100158797_100158874_100158957_100159204_100159771
H1_mix_00021572	chr12	-	7276	16	Fusion	ENSG00000238105.7_ENSG00000257489.6	novel	2343	9	NA	NA	-141	1640	intron_retention	FALSE	canonical	3	9	junction_14	12.9264586539908	144	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTGATACTTCATATGCT	89	False	NA	NA	False	NA	NA	NA	100199924	100161601	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr12_-_100166141_100166330_100166637_100167069_100167142_100167335_100167444_100167549_100167640_100168451_100168634_100168923_100169200_100170564_100170668_100170936_100170988_100173111_100173685_100177042_100177121_100180552_100180717_100195581_100195674_100196871_100196980_100198843_100198973_100199519
H1_mix_00021575	chr12	-	389	4	FSM	ENSG00000166153.17	ENST00000548313.5	389	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	1.24721912892465	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGACGGCTACTTACTTTTA	4719	False	NA	NA	False	NA	NA	NA	100262356	100252457	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_100252537_100256048_100256227_100261729_100261769_100262263
H1_mix_00021576	chr12	-	470	3	FSM	ENSG00000120805.14	ENST00000551688.1	470	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTAGTTGGAGGGATAA	14	True	NA	NA	False	AGTAAA	-13	NA	101407749	101395487	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_101395671_101396398_101396578_101407641
H1_mix_00021577	chr12	-	5628	21	NNC	ENSG00000111670.16	novel	5720	21	NA	NA	22	-3	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_20	59.3934971187924	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACTTTGATTTTTAAAT	12	True	NA	-24	True	CATAAA	-17	NA	101830937	101745501	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_101747242_101749100_101749192_101753371_101753540_101757211_101757311_101757571_101757658_101760029_101760144_101761126_101761347_101761563_101761764_101764201_101765305_101766090_101766295_101768036_101768161_101770020_101770192_101770405_101770586_101770995_101771158_101780151_101780287_101780556_101780622_101786011_101786218_101788547_101788590_101789937_101790058_101796676_101796763_101830625
H1_mix_00021580	chr12	-	1158	7	FSM	ENSG00000075188.9	ENST00000551200.5	1158	7	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_3	22.6819801212818	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAACTGATTGCTTGTTT	6	True	NA	NA	False	NA	NA	NA	102120091	102076992	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_102077504_102085765_102085857_102099105_102099201_102101031_102101105_102112107_102112233_102118362_102118584_102120049
H1_mix_00021581	chr12	-	926	6	FSM	ENSG00000171759.10	ENST00000549111.5	1252	6	0	326	0	267	multi-exon	FALSE	canonical	3	7	junction_1	3.26190128606002	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTGATTCCTCCAGGAAG	8	True	NA	NA	False	NA	NA	NA	102917226	102855011	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_102855333_102866595_102866664_102877461_102877551_102894734_102894919_102912790_102912899_102917070
H1_mix_00021582	chr12	-	2116	2	FSM	ENSG00000204954.10	ENST00000549478.1	1446	2	9	-679	0	128	multi-exon	FALSE	canonical	3	49	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCTTTCCTGCTAGGAA	-10	True	NA	NA	False	NA	NA	NA	103957181	103950065	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_103951631_103956630
H1_mix_00021583	chr12	-	620	5	FSM	ENSG00000204954.10	ENST00000549960.5	620	5	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_3	27.5079533953364	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTGGATGTTTAGCCGA	37	True	NA	54	True	NA	NA	NA	103957134	103951409	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_103951631_103953413_103953535_103954874_103954969_103956630_103956749_103957068
H1_mix_00021586	chr12	-	1400	11	NIC	ENSG00000120820.13	novel	1927	11	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	21.8789853512452	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTACTGTGTGCAAATTATA	21	True	NA	-5	True	TATAAA	-9	NA	104050021	103989282	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_103989578_103993391_103993505_103994334_103994502_103996734_103996848_103997450_103997536_103999396_103999515_104003134_104003307_104015012_104015106_104019629_104019677_104049422_104049493_104049894
H1_mix_00021587	chr12	-	727	2	FSM	ENSG00000120820.13	ENST00000552572.1	750	2	0	23	0	-23	multi-exon	FALSE	canonical	3	68	junction_1	0	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCCATCATTGTATTGCC	NA	False	NA	NA	False	GATAAA	-24	NA	103996846	103993886	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_103994502_103996734
H1_mix_00021588	chr12	-	557	5	FSM	ENSG00000120820.13	ENST00000550816.1	595	5	0	38	0	21	multi-exon	FALSE	canonical	3	40	junction_2	9.72111104761179	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAGGGACCACACAGG	21	True	NA	NA	False	NA	NA	NA	104050021	103999396	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_103999515_104003134_104003307_104015012_104015106_104019629_104019677_104049894
H1_mix_00021590	chr12	-	3193	21	FSM	ENSG00000136044.12	ENST00000547439.5	3196	21	0	3	0	0	multi-exon	FALSE	canonical	1	3	junction_12	41.1272111867557	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGTTAGATGTGGTTATT	44	False	NA	-7	True	AATAAA	-31	NA	105236203	105173299	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_105174449_105176034_105176083_105176875_105177017_105177225_105177263_105188272_105188448_105189771_105189825_105189990_105190156_105195260_105195350_105195444_105195502_105195584_105195628_105197764_105197954_105199372_105199525_105203702_105203786_105207060_105207208_105207970_105208030_105208157_105208200_105211229_105211318_105217068_105217141_105217665_105217726_105229124_105229224_105235958
H1_mix_00021591	chr12	-	851	4	FSM	ENSG00000136044.12	ENST00000547790.1	851	4	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_3	16.3367343397905	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATATGAATGTCATCTCTT	NA	False	NA	NA	False	NA	NA	NA	105177455	105174016	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_105174449_105176034_105176083_105176875_105177017_105177225
H1_mix_00021592	chr12	-	684	2	FSM	ENSG00000136044.12	ENST00000546731.1	684	2	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGTGGTAAGTCTTTT	NA	False	NA	NA	False	AAGAAA	-42	NA	105176374	105174104	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_105174449_105176034
H1_mix_00021597	chr12	-	837	5	FSM	ENSG00000110851.12	ENST00000550659.1	837	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	33.0529877620768	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGCCGAGATTATGCTCA	9383	False	NA	NA	False	AATGAA	-13	NA	107751775	107742248	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_107742349_107743196_107743283_107744542_107744683_107746274_107746425_107751414
H1_mix_00021598	chr12	-	1767	1	FSM	ENSG00000258072.1	ENST00000547904.1	679	1	205	-1293	205	1293	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCAATAAACATGTTATT	6	True	NA	NA	False	AATATA	-35	NA	107903743	107901976	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_107902000_107903700
H1_mix_00021602	chr12	-	2622	2	FSM	ENSG00000183160.9	ENST00000392806.4	2662	2	26	14	26	-14	multi-exon	FALSE	canonical	1	1	junction_1	0	195	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTATTCCGGCCTGAAG	6	True	NA	-16	True	NA	NA	NA	108598058	108589864	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_108592398_108597969
H1_mix_00021603	chr12	-	2314	11	FSM	ENSG00000110880.11	ENST00000541050.5	2487	11	173	0	-1	0	multi-exon	FALSE	canonical	3	20	junction_10	172.072077920853	2989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATGTGTTTCTGCAGTTT	1268	False	NA	-3	True	NA	NA	NA	108730670	108646566	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_108647523_108648604_108648851_108648962_108649021_108652271_108652418_108654305_108654411_108657303_108657424_108658737_108658920_108662028_108662159_108678271_108678395_108701123_108701324_108730622
H1_mix_00021605	chr12	-	1486	3	ISM	ENSG00000189046.11	ENST00000343075.7	1030	4	0	3	0	-3	intron_retention	FALSE	canonical	3	121	junction_1	5.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTCTCTTTTCTCTTTC	5	True	NA	-5	True	AATAAA	-14	NA	109093472	109088191	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_109088513_109090008_109090208_109092506
H1_mix_00021607	chr12	-	891	3	FSM	ENSG00000189046.11	ENST00000619381.4	895	3	0	4	0	-3	multi-exon	FALSE	canonical	3	12	junction_2	13	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTCTCTTTTCTCTTTC	-11	True	NA	-5	True	AATAAA	-14	NA	109093488	109088191	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_109088513_109092506_109092938_109093349
H1_mix_00021611	chr12	-	2135	2	FSM	ENSG00000110906.13	ENST00000545759.5	5355	2	3230	-10	1576	0	multi-exon	FALSE	canonical	3	307	junction_1	0	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCGTGTATTGGGCAGA	NA	False	NA	-9	True	AATAAA	-28	NA	109456399	109449960	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_109451814_109456117
H1_mix_00021614	chr12	-	1089	9	FSM	ENSG00000139428.12	ENST00000544051.5	1089	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_8	77.0158262956387	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGCAATGAGAAGGAGCT	-2	True	NA	-54	True	AATGAA	-32	NA	109573514	109556750	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_109557137_109559095_109559156_109561039_109561105_109561242_109561330_109561419_109561518_109561779_109561853_109565118_109565177_109568769_109568864_109573346
H1_mix_00021617	chr12	-	2436	14	FSM	ENSG00000111199.12	ENST00000537083.5	2436	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_9	7.22585757896454	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGCAGCCCAGCCCCAG	42	False	NA	NA	False	NA	NA	NA	109814796	109783620	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_109783779_109784315_109784438_109786709_109786838_109788399_109788717_109792362_109792430_109792651_109792818_109793526_109793601_109793929_109794023_109794328_109794488_109798613_109798913_109800617_109800759_109802990_109803144_109808295_109808469_109814410
H1_mix_00021618	chr12	-	2514	16	FSM	ENSG00000111199.12	ENST00000536838.1	2514	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	7.76201577484154	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGCAGCCCAGCCCCAG	42	False	NA	NA	False	NA	NA	NA	109814796	109783620	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_109783779_109784315_109784438_109786709_109786838_109788399_109788717_109792362_109792430_109792651_109792818_109793526_109793601_109793929_109794023_109794328_109794488_109796524_109796705_109798613_109798913_109800617_109800759_109802990_109803144_109808295_109808469_109814410_109814616_109814717
H1_mix_00021620	chr12	-	217	1	FSM	ENSG00000241413.3	ENST00000492388.3	296	1	175	-96	175	96	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTTGTTTTATTCTTAC	NA	False	NA	NA	False	NA	NA	NA	109866334	109866117	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_109866100_109866300
H1_mix_00021621	chr12	-	5532	19	NIC	ENSG00000139436.22	novel	5598	20	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_1	32.3606223139051	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTGGTAATGCTGTGC	-3	True	NA	-11	True	AATAAA	-16	NA	109996366	109929803	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_109933191_109938379_109938569_109939164_109939248_109945259_109945350_109947255_109947505_109951166_109951317_109953091_109953235_109959846_109959959_109961277_109961376_109961612_109961686_109965525_109965578_109967457_109967504_109980951_109981047_109983372_109983504_109983607_109983695_109988962_109989069_109989689_109989803_109991626_109991761_109996172
H1_mix_00021622	chr12	-	2127	19	FSM	ENSG00000139436.22	ENST00000551209.5	2127	19	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_6	33.9709843510278	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGGCAGGGCACCGCCTC	-2	True	NA	NA	False	NA	NA	NA	109996224	109932977	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_109933191_109934021_109934086_109938379_109938569_109939164_109939248_109945259_109945350_109947255_109947505_109953091_109953235_109959846_109959959_109961277_109961376_109961612_109961686_109965525_109965575_109967457_109967504_109980951_109981047_109983372_109983504_109983607_109983695_109988962_109989069_109989689_109989803_109991626_109991761_109996172
H1_mix_00021623	chr12	-	687	3	FSM	ENSG00000139436.22	ENST00000552978.5	815	3	128	0	128	0	multi-exon	FALSE	canonical	3	63	junction_1	5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATCGCCAAGGCTGCCAA	NA	False	NA	NA	False	NA	NA	NA	109938849	109933037	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_109933191_109934021_109934086_109938379
H1_mix_00021625	chr12	-	1796	14	FSM	ENSG00000139436.22	ENST00000551455.5	2014	14	0	218	0	-218	multi-exon	FALSE	canonical	3	72	junction_3	13.459560294215	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTGTGCTTCCTGGAAA	3083	False	109996380	NA	False	NA	NA	NA	109996373	109950911	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_109951317_109953091_109953235_109959846_109959959_109961277_109961376_109961612_109961686_109965525_109965578_109967457_109967504_109980951_109981047_109983372_109983504_109983607_109983695_109988962_109989069_109989689_109989803_109991626_109991761_109996172
H1_mix_00021626	chr12	-	936	7	FSM	ENSG00000139436.22	ENST00000548643.5	936	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_6	36.907165820324	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGGATGGAGAATGAC	-5	True	NA	NA	False	NA	NA	NA	109996368	109980951	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_109981047_109983372_109983504_109983607_109983695_109988962_109989069_109989689_109989803_109991626_109991761_109996098
H1_mix_00021628	chr12	-	1717	5	ISM	ENSG00000196510.14	ENST00000455511.9	3023	11	19810	1346	-633	0	3prime_fragment	FALSE	canonical	3	336	junction_3	44.533695108311	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGACGACATGGAAGGGAG	3689	False	NA	NA	False	NA	NA	NA	110383898	110374245	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_110374334_110376065_110376217_110377392_110377618_110381751_110381949_110382842
H1_mix_00021630	chr12	-	1098	3	FSM	ENSG00000111229.16	ENST00000467622.2	1098	3	0	0	0	0	multi-exon	FALSE	canonical	3	1934	junction_2	165	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATTCCATGTCAGAAAAA	8253	False	NA	-34	True	AATAAA	-10	NA	110437299	110434909	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_110435218_110436109_110436684_110437083
H1_mix_00021632	chr12	-	1625	8	FSM	ENSG00000111231.9	ENST00000543199.5	1604	8	0	-21	0	20	multi-exon	FALSE	canonical	3	34	junction_7	220.949712627566	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCATTTTAATTAAGCAAAA	547	False	NA	7	True	NA	NA	NA	110468721	110452465	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_110453097_110453742_110453872_110455585_110455683_110455814_110455931_110457509_110457635_110459694_110459863_110465105_110465215_110468471
H1_mix_00021633	chr12	-	564	5	FSM	ENSG00000111231.9	ENST00000550974.1	564	5	0	0	0	0	multi-exon	FALSE	canonical	2	27	junction_4	277.034632311558	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGCAAAAAAGGAAATTGA	-11	True	NA	NA	False	AGTAAA	-1	NA	110468264	110455837	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_110455931_110457509_110457635_110459694_110459863_110465105_110465215_110468195
H1_mix_00021634	chr12	-	1127	5	FSM	ENSG00000111237.19	ENST00000621131.4	1124	5	0	-3	0	0	multi-exon	FALSE	canonical	1	1	junction_4	894.306540007396	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTCTCTTACATTGTGT	595	False	NA	-23	True	ATTAAA	-23	NA	110501503	110491522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_110492123_110492995_110493232_110496011_110496204_110499534_110499547_110501416
H1_mix_00021635	chr12	-	1057	5	FSM	ENSG00000111237.19	ENST00000552130.6	1057	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	904.850091175328	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTGATAACCTGTATTT	2552	False	NA	-7	True	AATAAA	-18	NA	110499546	110491623	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_110492123_110492995_110493232_110496011_110496204_110498819_110498860_110499456
H1_mix_00021636	chr12	-	1059	6	FSM	ENSG00000111237.19	ENST00000546588.1	1059	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	883.81455068357	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAATCTAGACTTTCTT	6	True	NA	-74	True	NA	NA	NA	110502092	110491690	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_110492123_110492995_110493232_110496011_110496204_110499534_110499547_110501416_110501560_110502048
H1_mix_00021639	chr12	-	2436	8	NNC	ENSG00000186298.12	novel	1472	8	NA	NA	0	41249	intron_retention	FALSE	non_canonical	0	0	junction_1	636.256558444206	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAATGGAAAATAAGAGCG	65	False	NA	NA	False	AATAGA	-2	NA	110742867	110678430	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_110678468_110719808_110721166_110722134_110722270_110722471_110722696_110724659_110724765_110730528_110730760_110731769_110731902_110742652
H1_mix_00021642	chr12	-	4414	26	NIC	ENSG00000204842.18	novel	4380	26	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	54.7951238706511	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTTAGTGTGTGTCTGT	-8	True	NA	-7	True	AATAAA	-45	NA	111599307	111452213	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_111452841_111453676_111453846_111455044_111455120_111456028_111456257_111457213_111457360_111464661_111464716_111470107_111470241_111470557_111470743_111485264_111485332_111485712_111485866_111486760_111486825_111488475_111488781_111509548_111509620_111509890_111509999_111510384_111510583_111513356_111513540_111516153_111516364_111518248_111518428_111519878_111520077_111520881_111520974_111525191_111525317_111552279_111552431_111552905_111552978_111554157_111554218_111555882_111555920_111598783
H1_mix_00021644	chr12	-	4648	25	FSM	ENSG00000204842.18	ENST00000550104.5	4648	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	44.3834303416139	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAATAAAAACTTAAAAA	NA	False	NA	-61	True	NA	NA	NA	111599676	111452267	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_111452841_111453676_111453846_111456028_111456257_111457213_111457360_111464661_111464716_111470107_111470241_111470557_111470743_111485270_111485332_111485712_111485866_111486760_111486825_111488475_111488781_111509548_111509620_111509890_111509999_111510384_111510583_111513356_111513540_111516153_111516364_111518248_111518428_111519878_111520077_111520881_111520974_111525191_111525317_111552279_111552431_111552905_111552978_111554157_111554218_111555882_111555920_111598783
H1_mix_00021646	chr12	-	4389	4	FSM	ENSG00000204842.18	ENST00000482777.5	4369	4	0	-20	0	0	multi-exon	FALSE	canonical	3	92	junction_2	39.7184535896799	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAGACTTGGAACGCCCT	NA	False	NA	NA	False	NA	NA	NA	111470841	111452430	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_111456257_111457213_111457360_111470107_111470241_111470557
H1_mix_00021652	chr12	-	3639	21	FSM	ENSG00000204842.18	ENST00000647305.1	3639	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	52.8311224563704	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTCTAAAGTACCAAAATAA	545	False	NA	NA	False	ACTAAA	-32	NA	111599122	111469425	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_111470241_111470557_111470743_111479069_111479103_111485270_111485332_111485712_111485866_111486760_111486825_111488475_111488781_111509548_111509620_111509890_111509999_111510384_111510583_111513356_111513540_111516153_111516364_111518248_111518428_111519878_111520077_111520881_111520974_111525191_111525317_111552279_111552431_111552905_111552978_111554157_111554218_111555882_111555920_111598783
H1_mix_00021657	chr12	-	813	1	FSM	ENSG00000258359.1	ENST00000552501.1	511	1	98	-400	98	400	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTCAAGACCAACCTGAC	NA	False	NA	NA	False	NA	NA	NA	111670264	111669451	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_111669500_111670300
H1_mix_00021659	chr12	-	1451	10	FSM	ENSG00000198270.13	ENST00000550831.7	1446	10	-19	14	0	2	multi-exon	TRUE	canonical	3	32	junction_3	7.38533749239283	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCATTTCAAAGCTGTC	4	True	NA	-11	True	AATAAA	-20	NA	112013144	111931295	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_111931828_111932585_111932660_111933885_111934031_111936691_111936831_111937159_111937244_111938160_111938211_111943264_111943370_111991757_111991890_112005256_112005304_112013001
H1_mix_00021662	chr12	-	627	1	FSM	ENSG00000274227.1	ENST00000614212.1	627	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATAGACCACATTTTTGTT	NA	False	NA	NA	False	AATAAA	-13	NA	112019430	112018803	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_112018800_112019400
H1_mix_00021666	chr12	-	15728	76	FSM	ENSG00000173064.14	ENST00000682272.1	15752	76	24	0	24	0	multi-exon	TRUE	canonical	1	4	junction_48	10.9322275863613	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTCTCTTGGCATTTGA	10	True	NA	-7	True	ATTAAA	-15	NA	112382407	112160194	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_112162524_112163041_112163265_112163541_112163738_112164108_112164276_112167316_112167539_112167813_112167918_112169502_112169659_112170332_112170453_112171116_112171264_112172670_112172862_112175735_112175860_112176595_112176703_112178930_112179083_112179173_112179398_112183058_112183267_112184186_112185494_112190785_112190966_112192559_112192766_112193060_112193192_112193468_112193675_112194884_112195067_112200637_112200799_112203635_112203773_112204485_112204624_112207873_112208001_112208493_112208631_112210014_112210253_112212486_112212651_112216291_112216372_112216772_112216922_112217033_112217196_112219385_112219490_112226642_112226759_112228088_112228259_112228646_112228812_112229697_112229881_112230686_112230823_112231512_112231716_112233003_112233086_112235076_112235267_112235503_112235785_112236944_112237099_112239051_112239237_112239880_112240028_112243352_112243520_112243619_112243762_112243873_112244010_112246900_112247077_112247461_112247551_112248066_112248172_112248319_112248513_112250143_112250378_112250970_112251135_112252423_112252529_112254042_112254163_112256319_112256519_112258495_112258597_112259111_112259266_112261304_112261430_112264083_112264213_112265174_112265296_112265877_112265984_112266911_112266983_112269703_112269850_112270226_112270460_112273654_112273796_112274846_112274961_112279227_112279387_112283109_112283303_112306063_112306235_112308752_112308892_112309560_112309670_112313016_112313148_112314456_112314547_112319224_112319743_112381951
H1_mix_00021669	chr12	-	2008	3	FSM	ENSG00000089009.16	ENST00000546368.2	2008	3	0	0	0	0	multi-exon	FALSE	canonical	3	6502	junction_2	2269	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAAAATCCTTGGATTG	-34	True	NA	NA	False	NA	NA	NA	112409635	112406293	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_112406343_112406746_112408657_112409586
H1_mix_00021672	chr12	-	872	9	FSM	ENSG00000123064.13	ENST00000551344.1	872	9	0	0	0	0	multi-exon	FALSE	canonical	1	24	junction_7	162.45417623133	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAGGCTGCACCTGTCCC	1	True	NA	NA	False	NA	NA	NA	113185440	113174875	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_113174937_113175035_113175158_113176839_113176936_113177051_113177094_113178976_113179027_113179142_113179332_113179934_113180006_113180980_113181059_113185277
H1_mix_00021673	chr12	-	1674	3	FSM	ENSG00000166578.10	ENST00000546692.1	1872	3	0	198	0	-198	multi-exon	FALSE	canonical	3	4	junction_2	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTGCCCTGCAAAGGAAT	16	True	NA	NA	False	NA	NA	NA	113221027	113200242	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_113200814_113207437_113208510_113220996
H1_mix_00021675	chr12	-	1548	4	FSM	ENSG00000249550.8	ENST00000550223.6	1607	4	59	0	24	0	multi-exon	FALSE	canonical	1	1	junction_1	3.77123616632825	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCTAGTGTGTAACATTC	54	False	NA	NA	False	GATAAA	-17	NA	113773627	113745327	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_113746596_113753430_113753564_113767074_113767209_113773614
H1_mix_00021677	chr12	-	4164	26	NIC	ENSG00000122965.11	novel	4422	25	NA	NA	0	-85	combination_of_known_junctions	TRUE	canonical	2	6	junction_1	93.9442898743718	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCACCCACTTCTCTTC	20	False	NA	NA	False	NA	NA	NA	113966310	113816826	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_113817926_113818102_113818187_113823208_113823322_113844667_113844789_113858790_113858897_113914968_113915086_113918391_113918448_113920610_113920691_113924696_113924758_113927053_113927230_113937006_113937137_113939959_113940161_113942323_113942435_113945827_113945925_113946353_113946476_113947333_113947465_113948832_113949037_113950082_113950155_113952511_113952591_113955130_113955212_113957781_113958051_113959211_113959405_113959864_113959904_113960058_113960179_113962231_113962415_113966191
H1_mix_00021679	chr12	-	5040	7	NIC	ENSG00000135111.16	novel	4208	8	NA	NA	13	-1	intron_retention	FALSE	canonical	3	33	junction_5	25.475478405714	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGGCCTTGTGTTAAAT	7	True	NA	-8	True	AATAAA	-16	NA	114684162	114670255	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_114672303_114674164_114674836_114676312_114676471_114677579_114677657_114679504_114679973_114680878_114681147_114682811
H1_mix_00021680	chr12	-	5875	18	FSM	ENSG00000123066.9	ENST00000549786.2	5683	18	0	-192	0	192	multi-exon	FALSE	canonical	3	18	junction_14	7.51100691741758	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAGGATTTAATTATATTA	NA	False	NA	NA	False	NA	NA	NA	116022508	115981111	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_115982604_115983116_115983541_115984179_115984373_115986265_115986490_115987108_115987289_115991019_115991958_115996475_115996682_115997009_115997231_116003002_116003103_116005868_116005994_116006305_116006412_116007410_116007637_116008400_116009133_116012796_116012902_116015108_116015275_116019223_116019413_116019777_116019973_116022455
H1_mix_00021682	chr12	-	1867	12	NNC	ENSG00000135108.16	novel	5976	12	NA	NA	12	-470	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	158.537114042503	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACTGTCACATGTTCTCT	87	False	NA	NA	False	AGTAAA	-26	NA	117190444	117142460	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_117142665_117155790_117155949_117157872_117158064_117165484_117165618_117166897_117167078_117172470_117172608_117174204_117174342_117174650_117174798_117177519_117177642_117186476_117186572_117189226_117189363_117190217
H1_mix_00021686	chr12	-	2719	4	NNC	ENSG00000176834.14	novel	5009	9	NA	NA	5067	7985	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	32.5269119345812	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATAATGTAGAGGAAGTGA	NA	False	NA	NA	False	NA	NA	NA	118068674	118055607	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_118055633_118063592_118064834_118065539_118066695_118068376
H1_mix_00021687	chr12	-	5013	10	NNC	ENSG00000176834.14	novel	5009	9	NA	NA	0	7985	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	18.579824448665	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATAATGTAGAGGAAGTGA	647	False	NA	NA	False	NA	NA	NA	118103990	118055607	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_118055633_118063592_118066695_118068376_118068598_118071051_118071068_118071358_118071470_118073698_118073993_118079345_118079607_118082126_118082430_118095532_118095815_118103592
H1_mix_00021689	chr12	-	402	1	FSM	ENSG00000176834.14	ENST00000621133.1	418	1	-25	41	-25	-41	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAAAAATAATGGC	NA	False	NA	NA	False	ACTAAA	-9	NA	118117488	118117086	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_118117100_118117500
H1_mix_00021690	chr12	-	694	4	FSM	ENSG00000176834.14	ENST00000539956.1	694	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	4.02768199119819	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGGAGTCTCGCACTGT	2020	False	NA	NA	False	NA	NA	NA	118136026	118117666	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_118117883_118121500_118121619_118126480_118126671_118135856
H1_mix_00021691	chr12	-	432	2	FSM	ENSG00000135090.14	ENST00000537569.1	675	2	0	243	0	-243	multi-exon	FALSE	canonical	3	64	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAGGAAAGGACGACGTT	NA	False	NA	NA	False	NA	NA	NA	118161879	118160018	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_118160359_118161787
H1_mix_00021693	chr12	-	472	4	FSM	ENSG00000255618.2	ENST00000545276.1	680	4	203	5	203	-5	multi-exon	FALSE	canonical	0	0	junction_3	5.43650214343336	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAACCCTTGTGTGATGT	NA	False	NA	-6	True	AATAAA	-16	NA	118774934	118773036	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_118773303_118773610_118773776_118774485_118774519_118774926
H1_mix_00021701	chr12	-	5281	31	NNC	ENSG00000089154.11	novel	8681	58	NA	NA	0	2448	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	114.097429126748	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGGGGGTATTGTTAAAA	NA	False	NA	NA	False	AAAAAG	-1	NA	120155687	120124753	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_120124782_120127267_120127975_120129275_120129495_120130645_120130754_120131184_120131334_120131925_120132023_120134290_120134406_120134532_120134727_120136501_120136733_120137205_120137320_120137544_120137815_120137900_120138045_120138322_120138416_120138694_120138857_120140858_120141024_120142506_120142723_120142823_120142942_120144305_120144449_120144638_120144836_120144922_120145062_120145261_120145331_120147051_120147273_120148166_120148347_120149605_120149721_120149921_120150044_120151144_120151392_120153212_120153408_120153743_120153910_120154969_120155041_120155240_120155431_120155591
H1_mix_00021705	chr12	-	4112	12	FSM	ENSG00000089159.17	ENST00000536957.5	4112	12	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_11	277.869581156757	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGCTAGTGCTATTTC	4509	False	NA	-15	True	AATAAA	-18	NA	120226844	120210447	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_120212581_120213841_120213991_120214135_120214218_120214824_120214999_120215102_120215274_120215559_120215662_120221622_120221759_120222548_120222751_120222862_120223000_120223717_120223834_120224150_120224378_120226361
H1_mix_00021708	chr12	-	2983	16	NNC	ENSG00000135097.7	novel	2959	15	NA	NA	0	23193	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	45.5143445031954	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAAACCAACAACAAAAT	5	True	NA	NA	False	AAAAAG	-12	NA	120369164	120318136	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_120318161_120341329_120343106_120345569_120345633_120346134_120346323_120347445_120347515_120351343_120351401_120353298_120353380_120356901_120357020_120357815_120357899_120359004_120359054_120363042_120363136_120364713_120364756_120368007_120368093_120368191_120368274_120368832_120368874_120369032
H1_mix_00021710	chr12	-	1521	8	NNC	ENSG00000110871.15	novel	1506	7	NA	NA	0	16007	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	127.351994928407	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCACGGTGGCTTACG	5906	False	NA	NA	False	AAAAAG	-1	NA	120529140	120487271	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_120487311_120503284_120503886_120503969_120504082_120504894_120504984_120510016_120510124_120516566_120516789_120522213_120522364_120528939
H1_mix_00021718	chr12	-	4797	15	NIC	ENSG00000110931.19	novel	2006	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_9	84.0955785195073	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAAGCCTGGGCCTCTTGG	1119	False	NA	-22	True	AATAAA	-17	NA	121296686	121237696	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_121240870_121245139_121245241_121248605_121248735_121249786_121249875_121249960_121250035_121252660_121252715_121253272_121253473_121255549_121255639_121255782_121255805_121263805_121263940_121268637_121268690_121269527_121269582_121270897_121270946_121274055_121274586_121296637
H1_mix_00021719	chr12	-	2409	18	NNC	ENSG00000089053.13	novel	2574	17	NA	NA	0	41222	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	243.043262983488	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAGAGCACAGGAGGGCT	113	False	NA	NA	False	NA	NA	NA	121352327	121267022	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_121267054_121308356_121308692_121309700_121309864_121318276_121318425_121318500_121318609_121319696_121319819_121320384_121320460_121327095_121327232_121328315_121328498_121330582_121330673_121331346_121331429_121335532_121335724_121337290_121337393_121342002_121342070_121345838_121346032_121346895_121347006_121347801_121347882_121352133
H1_mix_00021720	chr12	-	2627	10	FSM	ENSG00000089053.13	ENST00000535641.5	2627	10	0	0	0	0	multi-exon	FALSE	canonical	3	654	junction_7	127.21353682143	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGTATTTGTTTTATTCC	NA	False	NA	1	True	AATAAA	-40	NA	121335609	121308331	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_121308692_121309700_121309864_121318276_121318425_121318500_121318609_121319696_121319819_121320384_121320460_121327095_121328498_121330582_121330673_121331346_121331429_121335532
H1_mix_00021730	chr12	-	1321	9	NNC	ENSG00000089094.20	novel	892	7	NA	NA	1176	-46	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	112.780691499033	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTCCTTCATCAGCATT	4293	False	NA	-18	True	AATAAA	-17	NA	121578468	121516392	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_121516864_121520984_121521101_121532805_121532960_121534496_121534591_121548876_121548984_121549459_121549639_121574546_121574594_121575780_121575860_121578394
H1_mix_00021734	chr12	-	1491	4	FSM	ENSG00000212694.8	ENST00000541694.5	875	4	10	-626	0	0	multi-exon	FALSE	canonical	3	32	junction_3	4.92160768674447	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGAGTTGCTGTGCATT	9184	False	NA	-3	True	AATAAA	-19	NA	121802933	121795266	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_121796243_121799846_121799957_121801706_121801809_121802630
H1_mix_00021735	chr12	-	1785	5	NNC	ENSG00000212694.8	novel	1521	7	NA	NA	151	0	intron_retention	FALSE	canonical	1	2	junction_4	16.0214699700121	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGAGTTGCTGTGCATT	8784	False	NA	-3	True	AATAAA	-19	NA	121803333	121795266	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_121796243_121799846_121799957_121801706_121801809_121802630_121802941_121803046
H1_mix_00021737	chr12	-	1014	4	FSM	ENSG00000212694.8	ENST00000535643.5	1014	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	12.657891697365	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTAGATCAGTGGTTCTTA	-3	True	NA	NA	False	AAAACA	-2	NA	121802946	121799171	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_121799658_121799846_121799957_121801706_121801809_121802630
H1_mix_00021744	chr12	-	2299	14	FSM	ENSG00000139719.11	ENST00000643696.1	2299	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	179.815289843602	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTTCACCATGTTGGCC	-1	True	NA	NA	False	NA	NA	NA	122266433	122231885	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_122232428_122232799_122232969_122235785_122235924_122238586_122238725_122239877_122239946_122241008_122241132_122242381_122242509_122244568_122244763_122249870_122250046_122250982_122251100_122261260_122261448_122263571_122263700_122264133_122264200_122266306
H1_mix_00021747	chr12	-	8264	25	NIC	ENSG00000130779.22	novel	5880	25	NA	NA	-121	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_10	35.4149999607825	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTGGGTTTTGTT	891	False	NA	-8	True	AATAAA	-13	NA	122422790	122271433	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_122273101_122274037_122274163_122278153_122278204_122278791_122278943_122279027_122279146_122288488_122288542_122309761_122309883_122316748_122316856_122319231_122319349_122322113_122324382_122327946_122328163_122328260_122328427_122332986_122333144_122334026_122334111_122334647_122334706_122336631_122336749_122340752_122341698_122352725_122352787_122354452_122354557_122355114_122355313_122360958_122361182_122363982_122364108_122377388_122377961_122380367_122380559_122422520
H1_mix_00021750	chr12	-	1777	10	NIC	ENSG00000111011.18	novel	3461	10	NA	NA	28	-2	combination_of_known_splicesites	FALSE	canonical	3	14	junction_9	293.530994009908	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAACTGGTGTTAATTTA	86	False	NA	-42	True	AATAAA	-11	NA	122526908	122505060	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_122505707_122506833_122506924_122508217_122508448_122511108_122511189_122513766_122513875_122515104_122515228_122517226_122517431_122518838_122519030_122521384_122521429_122526847
H1_mix_00021754	chr12	-	531	4	ISM	ENSG00000111011.18	ENST00000331738.12	3461	10	-51	15386	0	0	5prime_fragment	FALSE	canonical	3	564	junction_1	48.7259912389909	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAGTCATGTTGTATTAT	7	False	NA	NA	False	AAGAAA	-45	NA	122526987	122518839	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_122519030_122521384_122521429_122522142_122522300_122526847
H1_mix_00021780	chr12	-	2092	4	FSM	ENSG00000196498.13	ENST00000461081.2	2910	4	0	818	0	-818	multi-exon	FALSE	canonical	3	218	junction_1	12.657891697365	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATGGGGCCACAGGTGGG	6688	False	NA	NA	False	AATACA	-27	NA	124336392	124332292	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_124332468_124333129_124333280_124334423_124335281_124335482
H1_mix_00021801	chr12	-	10890	12	FSM	ENSG00000176915.15	ENST00000539605.5	10890	12	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_4	61.213891363544	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTATGTGGACCACTGC	3	True	NA	-12	True	AGTAAA	-16	NA	132761813	132725667	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_132727444_132728031_132728164_132729678_132730271_132734384_132734576_132735405_132735513_132736892_132737066_132741418_132741486_132743153_132743277_132747831_132748021_132748137_132748332_132750642_132750850_132754674
H1_mix_00021808	chr12	-	982	4	FSM	ENSG00000090615.16	ENST00000687165.1	1001	4	15	4	-6	2	multi-exon	FALSE	canonical	3	10	junction_3	6.84754619472471	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTTGAAAATGCTTTAT	9	True	NA	-2	True	AATAAA	-16	NA	132828847	132812951	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_132813420_132816659_132816813_132821995_132822312_132828802
H1_mix_00021811	chr12	-	3302	17	ISM	ENSG00000072609.18	ENST00000450056.7	11228	18	83	8049	0	0	3prime_fragment	FALSE	canonical	2	172	junction_13	67.291779540669	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAAAGTCCTCTCTTTTG	78	False	NA	-67	True	NA	NA	NA	132887522	132840404	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_132841597_132843010_132843084_132844026_132844135_132847042_132847131_132848084_132848156_132848640_132848725_132851617_132851738_132853430_132853574_132856467_132856631_132857404_132857560_132859067_132859228_132861466_132861635_132869618_132869799_132870723_132870784_132872284_132872395_132877554_132877655_132887195
H1_mix_00021812	chr12	-	3135	18	NIC	ENSG00000072609.18	novel	11228	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	172	junction_13	66.3829198026306	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAAAGTCCTCTCTTTTG	36	False	NA	-67	True	NA	NA	NA	132887564	132840404	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_132841597_132843010_132843084_132844026_132844135_132847042_132847131_132848084_132848156_132848640_132848725_132851617_132851735_132853430_132853574_132856467_132856631_132857404_132857560_132859067_132859228_132861466_132861635_132869618_132869799_132870723_132870784_132872284_132872395_132877554_132877655_132887195_132887341_132887546
H1_mix_00021819	chr12	-	1162	4	NNC	ENSG00000196458.11	novel	1143	3	NA	NA	6	2594	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	1.24721912892465	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGAGCCTCCCAGATGC	10	True	NA	-29	True	AATAAA	-23	NA	132956285	132942203	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_132943023_132945620_132945798_132948147_132948271_132956242
H1_mix_00021820	chr12	+	1053	1	Intergenic	novelGene_265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCAGTTTCCTCATCTGT	NA	False	NA	NA	False	NA	NA	NA	25148	26201	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_25100_26200
H1_mix_00021821	chr12	+	204	1	Intergenic	novelGene_266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAGAAAAACA	NA	False	NA	NA	False	TATAAA	-17	NA	3846069	3846273	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_3846100_3846300
H1_mix_00021822	chr12	+	958	1	Intergenic	novelGene_269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACACAAAGCCTGTTTGG	1587	False	NA	21	True	AATACA	-12	NA	4022690	4023648	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_4022700_4023600
H1_mix_00021823	chr12	+	789	1	Intergenic	novelGene_274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCCCCCCACCAGTACAG	8237	False	NA	NA	False	NA	NA	NA	8706444	8707233	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_8706400_8707200
H1_mix_00021824	chr12	+	209	1	Intergenic	novelGene_275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTAATTTGCGAGTCCT	NA	False	NA	NA	False	NA	NA	NA	10334220	10334429	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_10334200_10334400
H1_mix_00021825	chr12	+	241	1	Intergenic	novelGene_284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	342	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACAAGAACTTCCAAAGG	NA	False	NA	NA	False	NA	NA	NA	12060348	12060589	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_12060300_12060600
H1_mix_00021826	chr12	+	1854	1	Intergenic	novelGene_285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGTAAATTACCCAGTC	8169	False	NA	9	True	ATTAAA	-9	NA	12832103	12833957	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_12832100_12834000
H1_mix_00021827	chr12	+	448	1	Intergenic	novelGene_287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAAAAAGGGGGGTTGT	NA	False	NA	NA	False	NA	NA	NA	13264818	13265266	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_13264800_13265300
H1_mix_00021828	chr12	+	2518	1	Intergenic	novelGene_295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGTGTGCGCTAAGAAAT	1986	False	NA	NA	False	NA	NA	NA	19167405	19169923	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_19167400_19169900
H1_mix_00021829	chr12	+	1264	1	Intergenic	novelGene_304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCATCAAAGAATCAATGATA	NA	False	NA	NA	False	AATAGA	-45	NA	45187786	45189050	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_45187800_45189000
H1_mix_00021830	chr12	+	1226	1	Intergenic	novelGene_305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCAGAGAGGAGTGTCCTG	8500	False	NA	NA	False	NA	NA	NA	46668600	46669826	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_46668600_46669800
H1_mix_00021832	chr12	+	1383	1	Intergenic	novelGene_314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCTCTTCTTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66977829	66979212	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_66977800_66979200
H1_mix_00021833	chr12	+	770	1	Intergenic	novelGene_316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACAAAGGAGGCTTTGGA	NA	False	NA	NA	False	NA	NA	NA	67768746	67769516	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_67768700_67769500
H1_mix_00021834	chr12	+	790	1	Intergenic	novelGene_321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCATGTCTGCCTGCAGC	NA	False	NA	NA	False	NA	NA	NA	72706194	72706984	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_72706200_72707000
H1_mix_00021835	chr12	+	213	1	Intergenic	novelGene_324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGGTGGAATGTCATCAG	NA	False	NA	NA	False	NA	NA	NA	72816236	72816449	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_72816200_72816400
H1_mix_00021836	chr12	+	14436	1	Intergenic	novelGene_326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGGAGATAGGGGTGGGG	NA	False	NA	NA	False	NA	NA	NA	80774156	80788592	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_80774200_80788600
H1_mix_00021838	chr12	+	532	1	Intergenic	novelGene_330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTCAGCCGCTAAGCCG	NA	False	NA	NA	False	GGGGCT	-23	NA	103225405	103225937	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_103225400_103225900
H1_mix_00021843	chr12	+	227	3	FSM	ENSG00000120645.12	ENST00000540907.5	398	3	35	136	35	0	multi-exon	FALSE	canonical	0	0	junction_2	2	413	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTGTTCCAGCGCCTA	2291	False	NA	NA	False	ATTAAA	-22	NA	169012	171330	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_169106_171111_171162_171246
H1_mix_00021844	chr12	+	4150	13	NNC	ENSG00000139044.12	novel	5492	12	NA	NA	-29968	74	intron_retention	FALSE	canonical	3	10	junction_1	29.4055692004083	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTACTTTTTGACTATTA	NA	False	NA	-28	True	NA	NA	NA	510494	555504	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_510568_535165_535270_536217_536296_544338_544435_544881_544973_545368_545470_546645_546714_548023_548103_548230_548298_549768_549913_550921_551032_552062_552164_552466
H1_mix_00021845	chr12	+	10887	27	NIC	ENSG00000060237.19	novel	10796	28	NA	NA	9	576	combination_of_known_junctions	FALSE	canonical	2	4	junction_9	22.8006864321044	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGTTGTTAAACTGCA	24	True	NA	NA	False	NA	NA	NA	752601	912028	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_754325_813641_813815_827041_827263_830002_830161_857160_857250_859244_859465_861012_861344_862082_862271_871264_871349_878214_878362_880720_881000_881691_881790_881910_882074_882942_883060_883394_883569_883773_883832_884120_884244_884648_886085_887220_887305_889139_889224_890452_890514_894561_894636_896070_896733_897478_897682_900475_900671_907846_908035_908474
H1_mix_00021846	chr12	+	10768	28	NIC	ENSG00000060237.19	novel	10796	28	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_9	23.7148700550603	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGGGTTTCATTTCCA	26	True	NA	23	True	AATAAA	-20	NA	752603	911452	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_754325_813641_813815_827041_827263_830002_830161_857160_857250_859244_859465_861012_861344_862082_862271_871264_871349_878214_878362_879572_880032_880720_881000_881691_881790_881910_882074_882942_883060_883394_883569_883773_883832_884120_884244_884648_886085_887220_887305_889139_889224_890452_890514_894561_894636_896070_896733_897478_897682_900475_900671_907846_908035_908474
H1_mix_00021847	chr12	+	10683	27	NIC	ENSG00000060237.19	novel	10796	28	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_8	23.6924637856996	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGGGTTTCATTTCCA	27	False	NA	23	True	AATAAA	-20	NA	752604	911452	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_754325_813641_813815_827041_827263_830002_830161_857160_857250_859244_859465_861012_861344_862082_862271_878214_878362_879572_880032_880720_881000_881691_881790_881910_882074_882942_883060_883394_883569_883773_883832_884120_884244_884648_886085_887220_887305_889139_889224_890452_890514_894561_894636_896070_896733_897478_897682_900475_900671_907846_908035_908474
H1_mix_00021848	chr12	+	10028	26	NIC	ENSG00000060237.19	novel	10796	28	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_10	23.460809875194	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGGGTTTCATTTCCA	31	False	NA	23	True	AATAAA	-20	NA	752608	911452	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_754325_813641_813815_827041_827263_830002_830161_857160_857250_859244_859465_861012_861344_862082_862271_871264_871349_878211_878362_881691_881790_881910_882074_882942_883060_883394_883569_883773_883832_884120_884244_884648_886085_887220_887305_889139_889224_890452_890514_894561_894636_896070_896733_897478_897682_900475_900671_907846_908035_908474
H1_mix_00021850	chr12	+	277	3	FSM	ENSG00000111186.13	ENST00000543563.1	716	3	282	157	282	-157	multi-exon	FALSE	canonical	1	1	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGAAGCTGTGCCAATTG	125	False	NA	NA	False	NA	NA	NA	1630178	1632749	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_1630227_1631297_1631435_1632657
H1_mix_00021851	chr12	+	425	3	FSM	ENSG00000004478.8	ENST00000543769.1	425	3	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGCGTGGTCAGTGGGCT	69	False	NA	NA	False	NA	NA	NA	2795068	2797282	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_2795245_2796264_2796369_2797137
H1_mix_00021852	chr12	+	1967	12	FSM	ENSG00000078246.17	ENST00000397132.6	1951	12	-16	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	47.2622365982024	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAAATGTGTCACTGCC	4	True	NA	4	True	AATAAA	-11	NA	2890890	2941130	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_2890989_2909528_2909581_2920762_2920923_2922261_2922403_2930247_2930346_2931036_2931241_2933417_2933531_2934446_2934562_2937630_2937730_2938113_2938286_2939310_2939425_2940529
H1_mix_00021853	chr12	+	580	3	FSM	ENSG00000197905.10	ENST00000536826.2	570	3	-10	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	98.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTATGGTAAGGAGCCC	-8	True	NA	NA	False	NA	NA	NA	2959396	2994983	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_2959482_2959947_2960197_2994737
H1_mix_00021854	chr12	+	6948	13	Fusion	ENSG00000250899.3_ENSG00000197905.10	novel	1710	13	NA	NA	4	1077	multi-exon	FALSE	non_canonical	2	46	junction_12	65.5487520010022	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTGTGTGCGTGATCTT	35	True	NA	9	True	AGTAAA	-20	NA	2959947	3046027	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr12_+_2960041_2994737_2994993_3011003_3011069_3012169_3012233_3017397_3017527_3018544_3018589_3019114_3019171_3020633_3020774_3021843_3022018_3037967_3038109_3040106_3040260_3040364_3043441_3043468
H1_mix_00021855	chr12	+	569	6	FSM	ENSG00000011105.14	ENST00000444315.6	570	6	1	0	1	0	multi-exon	FALSE	canonical	0	0	junction_3	16.2061716639063	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTCATCCTCCTAGCAGA	-7	True	NA	NA	False	NA	NA	NA	3077377	3279006	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_3077454_3083652_3083720_3201176_3201257_3206279_3206419_3278420_3278613_3278991
H1_mix_00021859	chr12	+	770	6	FSM	ENSG00000255639.3	ENST00000544741.2	770	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	402.322954850951	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAATACGGCATCCTGA	NA	False	NA	NA	False	NA	NA	NA	4669740	4744581	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_4669818_4682204_4682301_4685258_4685326_4726531_4726830_4739162_4739330_4744516
H1_mix_00021860	chr12	+	591	2	FSM	ENSG00000139180.11	ENST00000540688.1	642	2	51	0	51	0	multi-exon	FALSE	canonical	3	804	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCAGTATTTTCTTCCT	NA	False	NA	15	True	ATTAAA	-16	NA	4685030	4687233	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_4685326_4686937
H1_mix_00021862	chr12	+	1067	1	FSM	ENSG00000185652.12	ENST00000331010.7	1028	1	63	-102	63	-38	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCATGACTGTTGTTTTA	109	False	NA	NA	False	NA	NA	NA	5494194	5495261	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_5494200_5495300
H1_mix_00021863	chr12	+	1360	9	FSM	ENSG00000010278.15	ENST00000610354.5	1360	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	620.810760216026	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATGACAATGTCCTGGAC	381	False	NA	1	True	AATAAA	-3	NA	6200326	6238247	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6200566_6200892_6200974_6225425_6225535_6232631_6232730_6233411_6233487_6235228_6235328_6235475_6235566_6236191_6236276_6237762
H1_mix_00021864	chr12	+	2532	6	FSM	ENSG00000010278.15	ENST00000677585.1	2532	6	0	0	0	0	multi-exon	FALSE	canonical	3	1222	junction_1	116.589879492175	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTTGATACATAATAAAAAA	-18	True	NA	-18	True	NA	NA	NA	6200362	6238228	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6200566_6225425_6225535_6232631_6233487_6235228_6235328_6235475_6236276_6237762
H1_mix_00021865	chr12	+	1164	8	FSM	ENSG00000010278.15	ENST00000676788.1	1164	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	505.596112100784	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTTTTTGTTTTGTTTA	NA	False	NA	19	True	AATAAA	-21	NA	6224263	6238265	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6224370_6225425_6225535_6232631_6232730_6233411_6233487_6235228_6235328_6235475_6235566_6236191_6236276_6237762
H1_mix_00021867	chr12	+	1061	8	FSM	ENSG00000010292.13	ENST00000542492.1	1052	8	-9	0	-9	0	multi-exon	FALSE	canonical	3	440	junction_1	47.4126479293603	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGGCAAGTTCTGCATGA	4655	False	NA	NA	False	NA	NA	NA	6523190	6528067	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6523347_6525582_6525717_6526067_6526201_6526286_6526372_6526447_6526616_6526890_6527064_6527776_6527889_6527967
H1_mix_00021868	chr12	+	882	2	FSM	ENSG00000247853.2	ENST00000501075.2	2196	2	-47	1361	-47	-1361	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGACAGAGGGAGGGCCA	NA	False	NA	NA	False	NA	NA	NA	6578574	6583378	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6578722_6582643
H1_mix_00021870	chr12	+	1768	7	FSM	ENSG00000111652.10	ENST00000626119.2	1768	7	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	171.535629599865	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGGTATCTTCTGTGTT	-19	True	NA	39	True	AATAAA	-32	NA	6724013	6731873	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6724153_6724613_6724819_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
H1_mix_00021872	chr12	+	677	1	FSM	ENSG00000269892.1	ENST00000602431.1	657	1	-59	39	-59	-39	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTGAGTCCATTAAACC	NA	False	NA	-10	True	NA	NA	NA	6742925	6743602	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6742900_6743600
H1_mix_00021873	chr12	+	3026	10	FSM	ENSG00000010610.10	ENST00000011653.9	3049	10	23	0	11	0	multi-exon	FALSE	canonical	0	0	junction_4	7.44029735234809	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAAGATGCTCTTCGTGT	10	True	NA	5	True	AATAAA	-17	NA	6789550	6820799	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6789663_6800071_6800188_6800306_6800472_6814141_6814301_6814758_6814993_6816055_6816404_6817129_6817331_6818420_6818543_6818846_6818915_6819298
H1_mix_00021874	chr12	+	2620	15	NIC	ENSG00000110811.20	novel	2631	15	NA	NA	6	-2	combination_of_known_junctions	FALSE	canonical	1	2	junction_7	31.8113059095893	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCCAGGGGCCAGTCAAG	3	True	NA	16	True	AATAAA	-16	NA	6828412	6839844	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_6828939_6829858_6830012_6830352_6830555_6830638_6830771_6831215_6831353_6831824_6831915_6833591_6833645_6833743_6833810_6833924_6834050_6836984_6837087_6837422_6837574_6837731_6837850_6837957_6838034_6838999_6839141_6839296
H1_mix_00021875	chr12	+	710	7	FSM	ENSG00000110811.20	ENST00000538102.5	710	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	36.0693775937429	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCACAGGAGGCACCCG	42	False	NA	NA	False	GGGGCT	-23	NA	6830483	6837086	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6830555_6830638_6830771_6831215_6831353_6831824_6831915_6833591_6833645_6833924_6834050_6836984
H1_mix_00021876	chr12	+	1657	10	FSM	ENSG00000111664.11	ENST00000229264.8	1657	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	11.4449838060605	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTGATGTTTGCCTTC	4	True	NA	23	True	AATAAA	-17	NA	6840924	6847393	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6841034_6841257_6841345_6841585_6841625_6842969_6843077_6843173_6843238_6843362_6843526_6843631_6843699_6843776_6843979_6845585_6845803_6846791
H1_mix_00021878	chr12	+	534	3	FSM	ENSG00000111667.14	ENST00000535080.1	534	3	0	0	0	0	multi-exon	FALSE	canonical	3	802	junction_1	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAACATAGCGAGACCC	4708	False	NA	NA	False	NA	NA	NA	6856855	6858826	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6856892_6857628_6857724_6858423
H1_mix_00021879	chr12	+	1521	8	FSM	ENSG00000010626.15	ENST00000007969.12	1615	8	94	0	5	0	multi-exon	FALSE	canonical	2	4	junction_6	3.60272006083385	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTGTCTGACCGGGTT	-15	True	NA	5	True	AATAAA	-15	NA	6904826	6914229	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6904904_6905584_6905760_6905844_6905955_6906408_6906663_6907314_6907446_6909889_6910027_6912729_6913028_6913890
H1_mix_00021880	chr12	+	842	5	FSM	ENSG00000111674.9	ENST00000542509.1	825	5	-17	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	128.870089625173	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCGGTGAGCAATAAGCCA	-7	True	NA	NA	False	NA	NA	NA	6914579	6917709	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6914660_6915817_6915918_6916416_6916513_6916670_6917108_6917580
H1_mix_00021881	chr12	+	1911	10	FSM	ENSG00000111674.9	ENST00000545045.6	1911	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	138.0245102585	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTCTAAGGAGTCTT	23	False	NA	27	True	ATTAAA	-17	NA	6914609	6923698	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_6914660_6915817_6915918_6916416_6916513_6916670_6916730_6917037_6917108_6919565_6919764_6921580_6921783_6922055_6922165_6922343_6922403_6922730
H1_mix_00021882	chr12	+	4514	10	NNC	ENSG00000111676.15	novel	4702	10	NA	NA	169	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	49.0532590377257	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCTGTGACTATTCTTT	136	False	NA	37	True	AAAACA	-21	NA	6928127	6942321	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_6928385_6933855_6934029_6934175_6934314_6934464_6934579_6935549_6937562_6937844_6938068_6938480_6939178_6940879_6941024_6941373_6941555_6941746
H1_mix_00021883	chr12	+	1959	5	ISM	ENSG00000111676.15	ENST00000396684.3	4702	10	9747	0	8	0	3prime_fragment	FALSE	canonical	3	97	junction_1	16.3477827242718	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCTGTGACTATTCTTT	7	True	NA	37	True	AAAACA	-21	NA	6937705	6942321	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_6938068_6938480_6939178_6940879_6941024_6941373_6941555_6941746
H1_mix_00021884	chr12	+	2091	15	NIC	ENSG00000111679.17	novel	2159	16	NA	NA	16	0	intron_retention	FALSE	canonical	3	7	junction_1	43.0422194253645	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGCCTCTGAGCCCTTTG	21	False	NA	10	True	AATAAA	-18	NA	6946592	6961316	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_6946740_6951911_6952178_6954804_6954995_6955150_6955268_6955371_6955486_6955659_6955757_6956141_6956222_6956418_6956569_6957653_6957786_6957918_6958074_6959926_6959995_6960087_6960240_6960343_6960436_6960805_6960946_6961125
H1_mix_00021885	chr12	+	574	3	FSM	ENSG00000182326.16	ENST00000543187.5	566	3	-8	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	7.5	1191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTCTCTCTGTCCCTTCT	2	True	NA	NA	False	CATAAA	-5	NA	7060716	7062808	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_7060878_7061838_7061918_7062474
H1_mix_00021886	chr12	+	634	3	FSM	ENSG00000182326.16	ENST00000488701.1	634	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	5.5	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTCTCTCTGTCCCTTCT	-2	True	NA	NA	False	CATAAA	-5	NA	7060743	7062808	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_7060878_7061751_7061918_7062474
H1_mix_00021887	chr12	+	856	4	FSM	ENSG00000182326.16	ENST00000403949.5	1034	4	178	0	178	0	multi-exon	FALSE	canonical	3	20	junction_2	3.68178700572909	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTGCGGAGGTGAGCTT	347	False	NA	NA	False	NA	NA	NA	7061561	7064380	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_7061918_7062474_7062683_7062889_7063068_7064266
H1_mix_00021889	chr12	+	910	4	FSM	ENSG00000139182.15	ENST00000540931.1	910	4	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_3	6.34209919681348	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGCTGCTACTCTTGTTT	2996	False	NA	NA	False	NA	NA	NA	7135448	7137315	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_7135536_7135803_7135954_7136205_7136392_7136828
H1_mix_00021890	chr12	+	3329	16	NIC	ENSG00000139197.11	novel	3237	16	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	8	junction_1	27.8634766914205	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTCTGCTGGTCATGAA	0	True	NA	45	True	AATAAA	-18	NA	7189698	7211480	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_7189751_7190021_7190217_7190361_7190525_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202611_7202705_7203431_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
H1_mix_00021891	chr12	+	4589	2	NNC	ENSG00000215009.6	novel	2349	13	NA	NA	-4469	-9839	intron_retention	FALSE	canonical	3	101	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCGAATACTCTAAGATG	NA	False	NA	6	True	AATAAA	-20	NA	7299602	7308678	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_7299796_7304282
H1_mix_00021892	chr12	+	1755	6	NNC	ENSG00000215009.6	novel	2349	13	NA	NA	-4469	257	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_3	14.9184449591772	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACCATGGCAAATTTATT	NA	False	NA	NA	False	NA	NA	NA	7299602	7318774	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_7299796_7304282_7304533_7306532_7306744_7310538_7310747_7317136_7317281_7318025
H1_mix_00021893	chr12	+	1315	6	NNC	ENSG00000215009.6	novel	2349	13	NA	NA	-4373	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	28.9592817590492	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAGATAATAGCTGAT	NA	False	NA	-24	True	NA	NA	NA	7299698	7318517	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_7299796_7301302_7301427_7304282_7304533_7310538_7310747_7317136_7317281_7318025
H1_mix_00021894	chr12	+	2243	4	ISM	ENSG00000176654.12	ENST00000607111.2	1982	6	1571	68	-204	-68	intron_retention	FALSE	canonical	0	0	junction_2	6.12825877028341	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCAGTTGACTTTGGCC	8	False	NA	0	True	AATAAA	-12	NA	7892371	7900072	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_7892727_7895476_7895740_7898264_7898352_7898534
H1_mix_00021896	chr12	+	2651	7	FSM	ENSG00000089818.18	ENST00000639276.1	2646	7	-5	0	-3	0	multi-exon	FALSE	canonical	3	171	junction_4	21.4087209644419	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTGGTGCAATAATGGT	-14	True	NA	-17	True	TATAAA	-9	NA	8082262	8097729	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8082384_8089935_8090300_8091768_8091851_8092675_8092785_8092871_8093056_8095600_8095704_8096041
H1_mix_00021897	chr12	+	3327	7	FSM	ENSG00000089818.18	ENST00000640099.1	3313	7	-14	0	-3	0	multi-exon	FALSE	canonical	3	171	junction_4	22.8284666346404	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAATAATGGTAATTAAAAA	-14	True	NA	-8	True	TATAAA	-18	NA	8082262	8097738	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8082384_8089935_8090037_8090194_8090300_8091768_8092785_8092871_8093056_8095600_8095704_8096041
H1_mix_00021898	chr12	+	3130	6	FSM	ENSG00000089818.18	ENST00000545807.6	3113	6	-17	0	0	0	multi-exon	FALSE	canonical	3	171	junction_3	23.4316025913722	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTATGTTTAGTTTCAAAA	14	True	NA	NA	False	NA	NA	NA	8082290	8097411	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8082384_8089935_8090300_8091768_8092785_8092871_8093056_8095600_8095704_8096041
H1_mix_00021899	chr12	+	386	4	FSM	ENSG00000226711.8	ENST00000438689.6	503	4	0	117	0	-117	multi-exon	FALSE	canonical	1	1	junction_1	1.88561808316413	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACGTGGTTGTTTCTGAG	NA	False	NA	NA	False	NA	NA	NA	8194298	8195159	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8194328_8194419_8194482_8194728_8194797_8194932
H1_mix_00021900	chr12	+	3358	1	FSM	ENSG00000275367.1	ENST00000618256.1	3358	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGTCTCTGTGTCTTA	NA	False	NA	NA	False	NA	NA	NA	8217757	8221115	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_8217800_8221100
H1_mix_00021902	chr12	+	5371	36	NNC	ENSG00000166535.20	novel	3370	25	NA	NA	-17520	8	at_least_one_novel_splicesite	TRUE	canonical	3	7	junction_2	11.6231296498466	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTATGCATATTTCTTTG	9422	False	NA	25	True	AATAAA	-27	NA	8805100	8876795	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_8805430_8823181_8823366_8823719_8823883_8829726_8829780_8834661_8834683_8835506_8835667_8836254_8836340_8837439_8837567_8838335_8838451_8839112_8839223_8841368_8841537_8843133_8843362_8845441_8845503_8846076_8846223_8847548_8847699_8848719_8848915_8849668_8849760_8850159_8850275_8851783_8852013_8852209_8852337_8854127_8854250_8854779_8854832_8855508_8855593_8857163_8857341_8857506_8857589_8857945_8858103_8860880_8860956_8861134_8861298_8863793_8864009_8867841_8868058_8868229_8868358_8868536_8868628_8869134_8869204_8874424_8874528_8874970_8875013_8876057
H1_mix_00021903	chr12	+	2017	6	NIC	ENSG00000139187.10	novel	592	5	NA	NA	12	0	intron_retention	FALSE	canonical	1	1	junction_1	11.7132403714771	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGAAAACTGTTCATTCT	-19	True	NA	5	True	AATAAA	-24	NA	8950055	9010751	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_8950237_8990211_8990346_8992205_8992311_8995118_8995289_9008974_9009076_9009425
H1_mix_00021904	chr12	+	2919	2	FSM	ENSG00000245105.4	ENST00000667950.1	2930	2	0	11	0	-6	multi-exon	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACCTGAATTTCTGTGAT	-10	True	NA	NA	False	AATAAA	-19	NA	9065162	9068678	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_9065229_9065825
H1_mix_00021905	chr12	+	4649	27	NNC	ENSG00000111788.10	novel	3158	29	NA	NA	6250	849	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	62.2688506663935	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGAGTTTTTTATTGATA	NA	False	NA	NA	False	ATTAAA	-18	NA	9283484	9314090	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_9284351_9288201_9288350_9293661_9293911_9294029_9294247_9294431_9294519_9294816_9294975_9297780_9297827_9298420_9298529_9298779_9298868_9299259_9299469_9301093_9301247_9302227_9302275_9302622_9302703_9303974_9304020_9304139_9304208_9305718_9305758_9306014_9306124_9306236_9306369_9307201_9307315_9309872_9310021_9310338_9310442_9311549_9311619_9311730_9311832_9312277_9312324_9312616_9312696_9312874_9313030_9313104
H1_mix_00021906	chr12	+	746	1	FSM	ENSG00000212432.1	ENST00000391130.1	148	1	-659	61	-659	-61	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGCATTATTTTACCCTC	NA	False	NA	NA	False	NA	NA	NA	9444398	9445144	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_9444400_9445100
H1_mix_00021907	chr12	+	249	1	FSM	ENSG00000233719.4	ENST00000426641.3	1289	1	1	1039	1	-1039	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAGATTGCCACAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	9641723	9641972	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_9641700_9642000
H1_mix_00021908	chr12	+	7000	4	ISM	ENSG00000069493.15_ENSG00000213443.2	ENST00000430909.5	850	5	-3186	-1320	-3186	222	intron_retention	FALSE	canonical	3	22	junction_1	2.62466929133727	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCTATGATAGGACATAG	3247	False	NA	103	True	TTTAAA	-41	NA	9677738	9696449	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_9681034_9687901_9688087_9692827_9692932_9693033
H1_mix_00021909	chr12	+	1509	2	ISM	ENSG00000069493.15	ENST00000261339.10	465	4	22058	-255	3892	0	3prime_fragment	FALSE	canonical	3	30	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATAGTTCCACATGGCTG	2664	False	NA	7	True	AATAAA	-15	NA	9691792	9695129	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_9692932_9694759
H1_mix_00021911	chr12	+	324	2	Antisense	novelGene_ENSG00000255790.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTGTGCTCTAGAAAGAG	NA	False	NA	NA	False	NA	NA	NA	11462296	11468021	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr12_+_11462435_11467835
H1_mix_00021912	chr12	+	380	1	FSM	ENSG00000278654.1	ENST00000614709.1	524	1	-62	206	-62	-206	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGAACAGCTCCTGGCGCA	450	False	NA	NA	False	NA	NA	NA	11500436	11500816	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_11500400_11500800
H1_mix_00021913	chr12	+	257	1	FSM	ENSG00000241352.3	ENST00000475592.2	759	1	64	438	64	-438	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTCAACTTGATTATTGT	NA	False	NA	NA	False	AAGAAA	-44	NA	12851045	12851302	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_12851000_12851300
H1_mix_00021914	chr12	+	1450	1	FSM	ENSG00000234498.3	ENST00000459725.1	609	1	-791	-50	-791	50	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCAGTGGTTGAGATATTC	2302	False	NA	NA	False	AATAAA	-38	NA	12874707	12876157	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_12874700_12876200
H1_mix_00021915	chr12	+	1321	2	NNC	ENSG00000084444.14	novel	4711	13	NA	NA	8791	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTTGTGTGCCATTCTC	NA	False	NA	14	True	AATAAA	-18	NA	13075619	13083449	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_13075692_13082200
H1_mix_00021916	chr12	+	406	3	Intergenic	novelGene_288	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATACATGCAAGTCACAG	2361	False	NA	NA	False	NA	NA	NA	14667996	14710582	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_14668025_14705466_14705630_14710367
H1_mix_00021918	chr12	+	2085	9	FSM	ENSG00000151490.15	ENST00000674434.1	3800	9	1715	0	1715	0	multi-exon	FALSE	canonical	0	0	junction_1	1.1659223816361	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCAAAATGACATTGATGG	237	False	NA	NA	False	NA	NA	NA	15569416	15597254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_15569499_15578852_15578944_15580038_15580116_15580696_15580832_15581678_15581802_15586896_15587052_15589454_15589591_15594936_15595058_15596089
H1_mix_00021919	chr12	+	1411	8	FSM	ENSG00000023697.13	ENST00000531803.5	735	8	-64	-612	-7	115	multi-exon	FALSE	canonical	1	2	junction_2	227.165677200494	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTTTCTGTTGGGAAAC	-4	True	NA	NA	False	CATAAA	-2	NA	15911294	16033163	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_15911415_15911690_15911754_15956935_15957034_15958187_15958336_15959828_15959925_15962812_15962948_15982307_15982437_16032541
H1_mix_00021920	chr12	+	942	4	FSM	ENSG00000008394.13	ENST00000542256.5	933	4	-9	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	37.6563407675255	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGTTTCTGATTATTCA	-6	True	NA	NA	False	NA	NA	NA	16347644	16370408	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_16347711_16357604_16357700_16367324_16367466_16369768
H1_mix_00021921	chr12	+	1211	1	FSM	ENSG00000255993.1	ENST00000396338.3	1335	1	113	11	113	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGTATCTCTAGTGAACT	121	False	NA	NA	False	AAGAAA	-37	NA	18692874	18694085	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_18692900_18694100
H1_mix_00021922	chr12	+	305	1	FSM	ENSG00000243854.3	ENST00000492147.3	296	1	-65	56	-65	-56	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACATCTGTGAATAAGCAC	473	False	NA	NA	False	NA	NA	NA	19303414	19303719	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_19303400_19303700
H1_mix_00021923	chr12	+	3069	8	ISM	ENSG00000139154.16	ENST00000360995.8	2533	9	24	1	24	-1	intron_retention	FALSE	canonical	3	19	junction_1	43.9786590175234	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTAGCTTCAAATTGTAA	-6	True	NA	9	True	AATAAA	-14	NA	19440604	19520222	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_19440728_19462509_19462718_19473247_19473356_19493799_19493987_19500096_19500222_19512397_19512466_19514670_19514785_19518086
H1_mix_00021924	chr12	+	1498	1	FSM	ENSG00000256849.1	ENST00000414406.2	1498	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATGTCTCTTTTATTTA	321	False	NA	NA	False	NA	NA	NA	19941520	19943018	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_19941500_19943000
H1_mix_00021925	chr12	+	1546	4	FSM	ENSG00000134548.11	ENST00000535033.5	1683	4	134	3	47	-3	multi-exon	FALSE	canonical	1	1	junction_1	4.08248290463863	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATAATAGGCACCTGTCA	41	False	NA	NA	False	ATTAAA	-14	NA	21527177	21532520	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_21527193_21527726_21527790_21529000_21529085_21531136
H1_mix_00021926	chr12	+	2298	12	NIC	ENSG00000256995.8	novel	647	5	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	26.5572825454403	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGTTTAATTGACACATGA	16	False	NA	25	True	AATAAA	-35	NA	22699958	23174141	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_22700095_22861068_22861225_22887963_22888045_22969362_22969466_22970835_22971095_22972375_22972469_23046107_23046202_23053990_23054324_23057165_23057298_23057779_23057898_23167038_23167079_23173388
H1_mix_00021927	chr12	+	2273	13	NIC	ENSG00000256995.8	novel	647	5	NA	NA	6	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	32.4636548911069	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTTATAAAGGAAAGAGG	17	False	NA	9	True	AATAAA	-19	NA	22699959	23174125	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_22700095_22787559_22787721_22861068_22861225_22887963_22888045_22969362_22969466_22970835_22971095_22972375_22972469_23046107_23046202_23053990_23054155_23057165_23057298_23057779_23057898_23167038_23167079_23173388
H1_mix_00021928	chr12	+	375	1	FSM	ENSG00000278969.1	ENST00000625186.1	2373	1	649	1349	649	-1349	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTCTAGGTGAATGGCCG	313	False	NA	NA	False	ATTAAA	-2	NA	24902957	24903332	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_24903000_24903300
H1_mix_00021929	chr12	+	531	2	FSM	ENSG00000205707.11	ENST00000555151.5	538	2	-7	14	0	-14	multi-exon	FALSE	canonical	3	8	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAACTATTATAGGTTGTG	-1	True	NA	NA	False	NA	NA	NA	25195269	25196170	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_25195338_25195707
H1_mix_00021931	chr12	+	274	1	FSM	ENSG00000255725.2	ENST00000543961.1	1229	1	-76	1031	-76	-1031	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAACAGAACCAAAACAACC	NA	False	NA	NA	False	AAAAAG	-11	NA	25803221	25803495	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_25803200_25803500
H1_mix_00021932	chr12	+	203	1	Intergenic	novelGene_298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTCTCATTTGTTAGTT	NA	False	NA	NA	False	NA	NA	NA	25804778	25804981	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_25804800_25805000
H1_mix_00021933	chr12	+	2934	7	NNC	ENSG00000111790.14	novel	2932	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_5	75.083102108412	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTCTCCAATTTAATTT	-11	True	NA	10	True	ATTAAA	-20	NA	26938496	26966648	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_26938711_26954144_26954294_26956542_26956661_26957600_26957744_26960514_26960658_26963341_26963456_26964595
H1_mix_00021934	chr12	+	6088	1	FSM	ENSG00000275764.1	ENST00000620519.1	1861	1	-4238	11	-4238	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTAAAAATCCCAGCAC	9542	False	NA	6	True	AATAAA	-15	NA	27032861	27038949	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_27032900_27038900
H1_mix_00021935	chr12	+	4384	16	NNC	ENSG00000029153.15	novel	6785	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	14.8524595793274	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCTTAACTACTTTCTAA	7	True	NA	51	True	AATAAA	-17	NA	27332919	27425289	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_27333104_27368261_27368413_27380246_27380405_27385480_27385561_27387227_27387321_27389178_27389297_27390095_27390240_27400533_27400775_27401256_27401364_27401523_27401675_27402618_27402678_27403432_27403542_27415868_27415948_27418087_27418197_27420395_27421292_27423584
H1_mix_00021936	chr12	+	6026	29	NIC	ENSG00000110841.14	novel	5983	30	NA	NA	-12	0	combination_of_known_junctions	TRUE	canonical	2	21	junction_9	39.5465367817281	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATTGCCCTTATTTCA	NA	False	NA	18	True	AATAAA	-21	NA	27524129	27695564	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_27524366_27578151_27578240_27633361_27633461_27634909_27635116_27646061_27646149_27647728_27647843_27650009_27650142_27654721_27654815_27656615_27656731_27658815_27658849_27660883_27660946_27664361_27664447_27667165_27667321_27671430_27671547_27672426_27672484_27673766_27673828_27674191_27674222_27676427_27676600_27679488_27679640_27679932_27680062_27681545_27681697_27682386_27682499_27682614_27682704_27687384_27687508_27688297_27688424_27689014_27689204_27691748_27691929_27692590_27692657_27692795
H1_mix_00021937	chr12	+	1594	1	FSM	ENSG00000174236.4	ENST00000310791.4	1150	1	-448	4	-448	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGTCTGTTTGAAATA	NA	False	NA	NA	False	AATAAA	-29	NA	27695998	27697592	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_27696000_27697600
H1_mix_00021939	chr12	+	2567	14	NIC	ENSG00000123106.11	novel	2738	16	NA	NA	20	-3	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	42.4799291277448	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATTTGGTTGTTACTTTT	-5	True	NA	12	True	AATAAA	-14	NA	28190485	28550162	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_28190642_28255580_28255663_28257201_28257246_28259363_28259443_28305648_28305807_28306741_28306946_28307644_28307750_28362437_28362516_28391303_28391412_28450160_28450254_28450349_28450419_28452477_28452655_28484051_28484166_28549062
H1_mix_00021940	chr12	+	3684	1	FSM	ENSG00000257599.4	ENST00000641955.1	5529	1	1474	371	1126	-371	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGATGTGTGAAAAATCA	1128	False	NA	NA	False	NA	NA	NA	29390762	29394446	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_29390800_29394400
H1_mix_00021941	chr12	+	1267	4	FSM	ENSG00000285517.1	ENST00000547804.2	1250	4	-17	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	4.10960933531265	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTTTTCGTGAGTTGAAA	10	False	NA	NA	False	AATATA	-13	NA	30795947	30802708	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_30796030_30799912_30800022_30800533_30800602_30801700
H1_mix_00021942	chr12	+	3984	26	ISM	ENSG00000013573.17	ENST00000542838.6	3920	27	3	8	3	0	intron_retention	FALSE	canonical	3	179	junction_1	61.6883262862594	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGAGTTTTTTATTGA	-12	True	NA	15	True	AATAAA	-16	NA	31073862	31104791	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_31074092_31078389_31078538_31083812_31084062_31084582_31084670_31084968_31085127_31087937_31087984_31089043_31089152_31089402_31089491_31089885_31090095_31091718_31091872_31092845_31092893_31093244_31093325_31094589_31094635_31094754_31094823_31096340_31096380_31096636_31096746_31096858_31096991_31097884_31097998_31100634_31100708_31101026_31101131_31101832_31101983_31102242_31102312_31102426_31102528_31102935_31103021_31103316_31103396_31103576
H1_mix_00021944	chr12	+	1793	1	FSM	ENSG00000177340.5	ENST00000313737.5	1514	1	-93	-186	-93	186	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTCACCTTCCAAAAGCA	389	False	NA	NA	False	NA	NA	NA	31324222	31326015	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_31324200_31326000
H1_mix_00021945	chr12	+	538	1	FSM	ENSG00000223722.3	ENST00000453713.1	402	1	41	-177	41	177	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATTCAAATATGACTGA	20	False	NA	NA	False	AATAAA	-33	NA	31754760	31755298	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_31754800_31755300
H1_mix_00021947	chr12	+	861	1	FSM	ENSG00000276136.1	ENST00000616998.1	848	1	-531	518	-531	-518	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTCGTTGTTGTTTTTA	NA	False	NA	11	True	AATAAA	-18	NA	31999843	32000704	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_31999800_32000700
H1_mix_00021948	chr12	+	3565	9	NNC	ENSG00000151746.15	novel	9419	10	NA	NA	4	1604	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	36.2379290247111	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGTCTTGTTTTTATTTG	-6	True	NA	11	True	NA	NA	NA	32106888	32340724	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_32107545_32216246_32216460_32293993_32294147_32305696_32306123_32327460_32328556_32334515_32334668_32337498_32337817_32338785_32338980_32340366
H1_mix_00021950	chr12	+	4303	18	NIC	ENSG00000139132.16	novel	8465	17	NA	NA	22	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_17	19.2474327592037	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAAAGCTTTACATGTTA	34	False	NA	20	True	AATAAA	-17	NA	32399579	32646050	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_32399960_32564136_32564290_32576265_32576450_32581959_32582468_32598496_32598587_32601277_32601424_32602160_32602318_32607956_32608096_32610775_32610835_32611136_32611284_32619697_32619871_32624421_32624453_32624975_32625069_32625653_32625780_32633548_32633690_32638654_32638796_32640275_32640454_32644593
H1_mix_00021951	chr12	+	1195	2	NNC	ENSG00000139132.16	novel	549	3	NA	NA	20	-101856	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGGATGAATCTTAAAAAT	5	True	NA	6	True	AATAAA	-17	NA	32399875	32474442	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_32399960_32473331
H1_mix_00021952	chr12	+	362	8	FSM	ENSG00000205592.16	ENST00000484665.2	470	8	0	108	0	-108	multi-exon	FALSE	canonical	0	0	junction_2	1.29362644830535	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATAATTCCACGACTTCA	NA	False	NA	NA	False	NA	NA	NA	40557842	40563560	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_40557872_40558092_40558135_40559234_40559289_40560535_40560590_40561003_40561055_40561338_40561393_40561561_40561610_40563530
H1_mix_00021953	chr12	+	5795	25	NNC	ENSG00000018236.15	novel	5667	24	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	35.1364157012825	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAGAACAACTGTCCTT	-10	True	NA	NA	False	AATAAA	-16	NA	40692439	41072406	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_40692593_40895949_40896088_40908356_40908494_40910072_40910106_40918638_40918772_40922255_40922429_40924556_40924653_40929795_40930003_40933460_40933561_40933696_40933879_40936780_40936906_40937569_40937688_40939334_40939486_40943596_40943725_40943994_40944171_40959113_40959235_40980908_40981068_40993119_40993270_41014227_41014299_41016681_41016917_41020336_41020441_41025149_41025337_41027856_41027970_41029062_41029220_41069958
H1_mix_00021954	chr12	+	3443	8	FSM	ENSG00000165966.16	ENST00000539469.6	3041	8	2	-404	2	-9	multi-exon	FALSE	canonical	1	2	junction_1	1.69030850945703	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTATAGATCACTGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	41437684	41574736	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_41438014_41506455_41506713_41509810_41509914_41552655_41552755_41555697_41555761_41563547_41563650_41567782_41567900_41572363
H1_mix_00021955	chr12	+	3568	13	NIC	ENSG00000134283.18	novel	3377	12	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_11	162.317311837716	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATTGTCTTTTCTCTTA	-12	True	NA	13	True	AATAAA	-15	NA	42326151	42448618	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_42326230_42335882_42335975_42351884_42352050_42355160_42355223_42374862_42375075_42384939_42384997_42387455_42387536_42393569_42393690_42398853_42398995_42441314_42441430_42442640_42442742_42445972_42446291_42446591
H1_mix_00021956	chr12	+	2907	20	FSM	ENSG00000177119.17	ENST00000425752.6	3558	20	0	651	0	-651	multi-exon	FALSE	canonical	1	1	junction_19	82.7050628669292	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTTATAGGTTTGTC	0	True	NA	NA	False	NA	NA	NA	45216019	45439753	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_45216392_45302013_45302094_45331294_45331424_45347021_45347088_45348027_45348316_45348517_45348632_45350658_45350775_45357289_45357425_45367687_45367794_45378052_45378114_45388160_45388304_45390420_45390499_45401794_45402021_45403071_45403242_45403438_45403537_45409356_45409488_45416698_45416905_45421070_45421274_45422956_45423063_45439674
H1_mix_00021957	chr12	+	263	1	FSM	ENSG00000265093.2	ENST00000584467.2	296	1	164	-131	164	131	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACCCCAAGAAACCACTTT	NA	False	NA	NA	False	NA	NA	NA	45874198	45874461	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_45874200_45874500
H1_mix_00021958	chr12	+	276	2	ISM	ENSG00000257261.7	ENST00000551503.5	829	4	-15	68296	-2	0	5prime_fragment	FALSE	canonical	3	35	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGTGAATAGCGCCAAAG	210	False	NA	NA	False	NA	NA	NA	46383663	46387972	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_46383714_46387746
H1_mix_00021959	chr12	+	571	1	FSM	ENSG00000257261.7	ENST00000653856.1	871	1	241	59	241	-59	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTCACTATGCAATAGA	384	False	NA	NA	False	NA	NA	NA	46384359	46384930	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_46384400_46384900
H1_mix_00021963	chr12	+	1283	1	FSM	ENSG00000274124.1	ENST00000618623.1	312	1	-909	-62	-909	62	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGGAAGCGAAGCAAACA	NA	False	NA	NA	False	AAGAAA	-28	NA	48151907	48153190	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_48151900_48153200
H1_mix_00021964	chr12	+	2303	1	FSM	ENSG00000177875.5	ENST00000316554.5	2283	1	-20	0	-20	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCTGACTGGTACTAAGG	-14	True	NA	15	True	AATAAA	-19	NA	48183623	48185926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_48183600_48185900
H1_mix_00021965	chr12	+	427	1	FSM	ENSG00000139223.4	ENST00000266594.4	1064	1	294	343	294	-343	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACGAGGAGGAGAAGGATGA	294	False	NA	NA	False	NA	NA	NA	48472852	48473279	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_48472900_48473300
H1_mix_00021966	chr12	+	2514	12	NIC	ENSG00000167535.8	novel	1872	13	NA	NA	35	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	22.787919084426	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGCTTCTGTTCTGTC	56	False	NA	15	True	AATAAA	-15	NA	48815646	48828941	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_48815729_48823343_48823467_48823680_48823804_48824257_48824374_48824668_48824734_48825162_48825244_48825433_48825493_48825659_48825770_48826366_48826519_48826758_48826855_48826973_48827124_48827584
H1_mix_00021967	chr12	+	582	3	FSM	ENSG00000139537.11	ENST00000552188.1	582	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATTTGAAACCGAAGAA	-5	True	NA	NA	False	NA	NA	NA	48918143	48920963	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_48918473_48918684_48918904_48920929
H1_mix_00021968	chr12	+	1580	1	NIC	ENSG00000139537.11	novel	2084	9	NA	NA	12117	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGGGTTTAAAATTTG	NA	False	NA	NA	False	AATAAA	-25	NA	48930260	48931840	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_48930300_48931800
H1_mix_00021969	chr12	+	838	5	FSM	ENSG00000135406.14	ENST00000530631.1	865	5	27	0	27	0	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCACATTTGAACCAAATAA	1434	False	NA	NA	False	NA	NA	NA	49297147	49298648	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_49297274_49297356_49297578_49297676_49297727_49297957_49298038_49298287
H1_mix_00021970	chr12	+	562	4	NIC	ENSG00000135451.13	novel	675	4	NA	NA	1	-10	combination_of_known_splicesites	FALSE	canonical	3	62	junction_3	141.916250733389	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAATAAATAT	6	True	NA	-9	True	AATAAA	-3	NA	49323273	49324355	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_49323350_49323603_49323753_49323844_49324038_49324211
H1_mix_00021971	chr12	+	455	3	FSM	ENSG00000110844.14	ENST00000548399.1	455	3	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGCCTTTCGAAGCATG	6976	False	NA	NA	False	NA	NA	NA	49637556	49642304	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_49637825_49641907_49642025_49642234
H1_mix_00021973	chr12	+	2598	9	FSM	ENSG00000139644.13	ENST00000395006.8	2598	9	0	0	0	0	multi-exon	FALSE	canonical	3	2799	junction_6	199.067199709043	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTACTTTTAAAGAAAATAC	1820	False	NA	93	True	ATTAAA	-30	NA	49752455	49764742	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_49752550_49752972_49753082_49755634_49755756_49758226_49758276_49758382_49758481_49758682_49758763_49759220_49759322_49761703_49761780_49762872
H1_mix_00021975	chr12	+	2962	3	FSM	ENSG00000258057.6	ENST00000548872.5	3078	3	65	51	14	-51	multi-exon	TRUE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATTAGGAAGCTGCTAAA	58	False	NA	NA	False	CATAAA	-23	NA	49828606	49841092	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_49828749_49828934_49829084_49838421
H1_mix_00021976	chr12	+	331	1	FSM	ENSG00000242041.1	ENST00000459730.1	331	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAACTAATGAAAAGTCAAC	NA	False	NA	NA	False	NA	NA	NA	49863172	49863503	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_49863200_49863500
H1_mix_00021978	chr12	+	1601	11	NIC	ENSG00000161813.23	novel	2853	16	NA	NA	13	-8	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	138.68889645534	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGAACATGAGTTGGTT	-21	True	NA	-2	True	AATAAA	-9	NA	50400869	50461479	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_50401029_50427764_50427910_50428934_50429091_50430497_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50461134
H1_mix_00021980	chr12	+	1790	11	NNC	ENSG00000161813.23	novel	1577	11	NA	NA	11	1169	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_10	119.706140193392	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATACTTTACTTGGCTCC	6	True	NA	18	True	AATAAA	-30	NA	50400966	50456131	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_50401029_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50455506
H1_mix_00021981	chr12	+	6401	16	NNC	ENSG00000161813.23	novel	2068	10	NA	NA	173	-2	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_1	89.2157435035369	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAGCAGGACTGGTTT	196	False	NA	-1	True	AATAAA	-5	NA	50401365	50479994	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_50401480_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50461134_50461348_50462581_50462631_50466958_50467121_50473414_50473537_50473998_50474168_50475525
H1_mix_00021982	chr12	+	2391	11	NNC	ENSG00000066084.13	novel	8705	38	NA	NA	17	-1513	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	27.0822820308777	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTATATCCATCCATTG	-1	True	NA	NA	False	AATAAA	-14	NA	50505001	50685379	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_50505241_50625975_50626048_50640723_50640853_50660193_50660320_50671185_50671399_50674473_50674630_50675328_50675449_50678678_50678877_50680671_50680764_50683137_50683249_50684444
H1_mix_00021983	chr12	+	571	5	FSM	ENSG00000123268.9	ENST00000552510.5	549	5	-22	0	-22	0	multi-exon	TRUE	canonical	1	6	junction_1	81.5766510712471	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTATGCTTTCTGTCTA	216	False	NA	NA	False	NA	NA	NA	50763687	50814192	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_50763742_50780139_50780239_50795908_50796010_50809455_50809590_50814009
H1_mix_00021985	chr12	+	2123	9	NIC	ENSG00000050426.16	novel	2106	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	29.7279329923895	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGAAATGACTTATGCAT	NA	False	NA	17	True	AGTAAA	-19	NA	51048319	51060413	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_51048479_51049012_51049186_51052091_51052208_51053777_51053861_51055834_51056022_51056143_51056246_51056349_51056503_51058031_51058129_51059360
H1_mix_00021986	chr12	+	1721	6	FSM	ENSG00000050426.16	ENST00000552739.5	1713	6	-8	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	32.873089298087	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAACCTGTTGATGGAAA	5	True	NA	5	True	AGTAAA	-7	NA	51048337	51060401	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_51048479_51055834_51056022_51056143_51056246_51056349_51056503_51058031_51058129_51059360
H1_mix_00021987	chr12	+	3664	2	FSM	ENSG00000183283.16	ENST00000552459.2	3664	2	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCACTGCAAGGATTCTT	20	False	NA	NA	False	AATAAA	-43	NA	51238907	51243784	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_51241117_51242329
H1_mix_00021988	chr12	+	387	1	Intergenic	novelGene_307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGACCAGGGGACTCAA	4615	False	NA	NA	False	NA	NA	NA	51247657	51248044	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_51247700_51248000
H1_mix_00021989	chr12	+	2262	15	FSM	ENSG00000050438.17	ENST00000535225.6	2262	15	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	17.9541649991395	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTACTCACTTTCTTT	19	True	NA	1	True	AATAAA	-15	NA	51391316	51474575	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_51391489_51440707_51440790_51450875_51451023_51452123_51452260_51453538_51453700_51457350_51457540_51458558_51458651_51459950_51460109_51461203_51461292_51462309_51462457_51463613_51463715_51469613_51469789_51470391_51470526_51471286_51471533_51474341
H1_mix_00021990	chr12	+	654	1	FSM	ENSG00000257542.5	ENST00000548970.2	984	1	222	108	222	-97	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGCAGTGATGTACACG	NA	False	NA	NA	False	NA	NA	NA	52107499	52108153	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_52107500_52108200
H1_mix_00021992	chr12	+	4028	22	ISM	ENSG00000111077.18	ENST00000314250.11	4848	29	4835	463	873	-396	3prime_fragment	FALSE	canonical	3	11	junction_4	4.93403194170995	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCCCCTCCCAGCACCCC	1261	False	NA	NA	False	AATGAA	-34	NA	53054899	53063916	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_53055237_53055567_53055691_53055780_53055846_53057012_53057097_53057566_53057680_53057772_53057834_53058026_53058103_53058315_53058446_53058571_53058638_53058713_53058828_53059046_53060259_53060404_53060556_53060674_53061265_53061379_53061470_53061814_53061941_53062152_53062246_53062375_53062454_53062619_53062698_53063088_53063258_53063348_53063418_53063562_53063593_53063743
H1_mix_00021993	chr12	+	777	4	NNC	ENSG00000167779.9	novel	1177	4	NA	NA	440	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	107.483332041143	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCTTGTGTCTCTGTGT	142	False	NA	26	True	AATAAA	-16	NA	53098106	53102340	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_53098322_53100711_53100858_53101040_53101161_53102044
H1_mix_00021994	chr12	+	6598	31	NNC	ENSG00000135476.12	novel	6618	31	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	49.31406155111	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTTTGCGTAGTTTAT	11	True	NA	16	True	AATAAA	-16	NA	53268316	53293638	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_53268378_53268754_53268848_53269023_53270084_53270377_53270483_53270677_53270799_53272720_53272858_53274816_53275011_53276619_53276860_53277082_53277228_53277469_53277609_53277820_53277961_53279731_53279867_53281506_53281627_53282263_53282436_53283128_53283258_53283381_53283539_53284057_53284168_53285923_53286913_53287971_53288342_53288537_53288700_53289089_53289304_53289403_53289595_53290084_53290213_53290346_53290470_53290840_53290997_53291689_53291861_53291983_53292089_53292277_53292394_53292573_53292658_53292805_53292971_53293272
H1_mix_00021995	chr12	+	545	5	FSM	ENSG00000123349.15	ENST00000628881.2	528	5	-17	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	1509.53691160568	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTCTTTTCTTGGATTAA	2798	False	NA	33	True	AATAAA	-21	NA	53295491	53299452	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53295640_53296243_53296276_53297849_53297925_53298044_53298151_53299268
H1_mix_00021996	chr12	+	403	3	FSM	ENSG00000123349.15	ENST00000550846.5	392	3	-11	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	1643	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTCTTTTCTTGGATT	2831	False	NA	31	True	AATAAA	-19	NA	53295524	53299450	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53295640_53298044_53298151_53299268
H1_mix_00021997	chr12	+	1984	12	FSM	ENSG00000288663.1	ENST00000678985.1	1984	12	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_8	1416.62668814113	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCTCATACCTCCCACAAAT	35	False	NA	-36	True	NA	NA	NA	53295585	53307122	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53295640_53295838_53295942_53296453_53296552_53297849_53297925_53298044_53298151_53299268_53299954_53300149_53300263_53303033_53303173_53305907_53306061_53306201_53306321_53306679_53306862_53306965
H1_mix_00021998	chr12	+	988	6	FSM	ENSG00000139637.14	ENST00000548632.5	988	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	160.030747045685	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGACCCAGTCCTTGACT	32	True	NA	13	True	AATAAA	-14	NA	53299749	53307171	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53299954_53300149_53300263_53303033_53303194_53306197_53306321_53306679_53306862_53306965
H1_mix_00021999	chr12	+	569	3	FSM	ENSG00000135409.11	ENST00000548303.1	583	3	14	0	8	0	multi-exon	TRUE	canonical	3	33	junction_2	2	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAGTGACTGGGGAAGTT	-14	True	NA	NA	False	NA	NA	NA	53425089	53428924	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53425165_53425454_53425920_53428895
H1_mix_00022000	chr12	+	965	6	NIC	ENSG00000135409.11	novel	887	7	NA	NA	-13	54	combination_of_known_junctions	FALSE	canonical	3	17	junction_5	8.89044430835715	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGTCTTGTCTGCCTCA	-1	True	NA	14	True	CATAAA	-14	NA	53425102	53431527	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_53425165_53425454_53425488_53425688_53425920_53428895_53429011_53429452_53429626_53431176
H1_mix_00022003	chr12	+	895	9	NNC	ENSG00000197111.16	novel	1342	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	329.657682300898	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTCAGCTGTTGATG	853	False	NA	35	True	ATTAAA	-16	NA	53461014	53479614	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_53461143_53462479_53462568_53464759_53464853_53465931_53465974_53467220_53467294_53467804_53467844_53468779_53468833_53471637_53471808_53479405
H1_mix_00022004	chr12	+	1135	4	FSM	ENSG00000139546.11	ENST00000549610.5	1116	4	-19	0	0	0	multi-exon	FALSE	canonical	3	296	junction_3	49.4233413142684	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCCCCCCCATGGAACTG	-31	True	NA	NA	False	NA	NA	NA	53501282	53504395	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53501462_53502014_53502185_53503026_53503130_53503712
H1_mix_00022005	chr12	+	1480	9	FSM	ENSG00000139546.11	ENST00000549679.5	1466	9	-14	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	156.967353293607	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGGAATAAATATGCTGC	-11	True	NA	-13	True	AATGAA	-22	NA	53501590	53506396	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_53501709_53502014_53502185_53503026_53503213_53503729_53503809_53504396_53504470_53504697_53504816_53505134_53505263_53505648_53505851_53505990
H1_mix_00022006	chr12	+	208	3	Antisense	novelGene_ENSG00000283803.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATACAAAAATTATCAAGAC	7325	False	NA	NA	False	ATTAAA	-1	NA	54139605	54251299	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr12_+_54139634_54233841_54233968_54251245
H1_mix_00022007	chr12	+	339	3	Antisense	novelGene_ENSG00000241785.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	20	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAACAGGGTAAGACTC	7325	False	NA	NA	False	NA	NA	NA	54139605	54263736	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr12_+_54139634_54233841_54234115_54263698
H1_mix_00022011	chr12	+	807	6	NNC	ENSG00000182796.15	novel	1958	5	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	29.698484809835	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGAGTCCAGCCTCTGC	18	True	NA	5	True	AATAAA	-19	NA	55830854	55836246	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_55831084_55831256_55831350_55832958_55833039_55833446_55833542_55834850_55835040_55836125
H1_mix_00022012	chr12	+	4018	2	ISM	ENSG00000182796.15	ENST00000487582.1	1581	3	-1929	2	-5	0	intron_retention	FALSE	canonical	3	88	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGGGAGTCCAGCCTCT	8	True	NA	3	True	AATAAA	-17	NA	55830917	55836244	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_55833542_55834850
H1_mix_00022013	chr12	+	229	1	FSM	ENSG00000273973.1	ENST00000619602.1	560	1	27	304	27	-304	mono-exon	FALSE	NA	NA	NA	NA	NA	588	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCCCTGTTCACTACCAAC	NA	False	NA	NA	False	AATAGA	-28	NA	55929196	55929425	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_55929200_55929400
H1_mix_00022016	chr12	+	694	3	FSM	ENSG00000170515.14	ENST00000551061.1	694	3	0	0	0	0	multi-exon	FALSE	canonical	3	1515	junction_2	40	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTAGCTCACACTTTTG	1352	False	NA	NA	False	NA	NA	NA	56106161	56107219	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56106717_56106989_56107096_56107186
H1_mix_00022018	chr12	+	301	1	NIC	ENSG00000092841.19	novel	683	7	NA	NA	270	-619	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAAGATGGAACTGAAAGC	579	False	NA	NA	False	NA	NA	NA	56162050	56162351	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_56162000_56162400
H1_mix_00022019	chr12	+	2251	1	FSM	ENSG00000257576.1	ENST00000547203.1	1702	1	-62	-487	-62	487	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTAATTAGTGAGGC	-1	True	NA	NA	False	AATAAA	-23	NA	56510939	56513190	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56510900_56513200
H1_mix_00022020	chr12	+	1525	5	FSM	ENSG00000025423.11	ENST00000555159.5	1525	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	8.15475321515004	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGGTCTGTATTATGGT	NA	False	NA	-33	True	AAGAAA	-27	NA	56752160	56787736	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56752319_56773833_56774166_56781973_56782233_56784852_56785017_56787124
H1_mix_00022022	chr12	+	1833	1	FSM	ENSG00000258679.1	ENST00000556917.1	658	1	57	-1232	57	-669	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGCCTTTATAGTTCT	NA	False	NA	NA	False	AATAAA	-13	NA	56871766	56873599	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_56871800_56873600
H1_mix_00022026	chr12	+	1914	12	FSM	ENSG00000182199.11	ENST00000557433.5	1904	12	-10	0	0	0	multi-exon	FALSE	canonical	1	15	junction_4	333.717453608551	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTTTCCATTACTGTG	27	False	NA	34	True	AATAAA	-13	NA	57229748	57234726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57229812_57230802_57231001_57231480_57231561_57231712_57231918_57232210_57232293_57232452_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
H1_mix_00022031	chr12	+	941	8	FSM	ENSG00000166908.18	ENST00000550095.5	941	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	90.9547992697696	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGATGATTGGGTGCTCTG	36	True	NA	NA	False	AAGAAA	-33	NA	57591265	57600436	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57591464_57594024_57594123_57595125_57595223_57595887_57596032_57597957_57598063_57599064_57599212_57599399_57599439_57600323
H1_mix_00022032	chr12	+	1850	6	FSM	ENSG00000178498.16	ENST00000551632.1	1840	6	-10	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	51.6139516022558	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACACCCGTTCTTTTCC	-2	True	NA	21	True	AATAAA	-27	NA	57604823	57609804	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57604859_57606189_57606253_57606442_57606519_57606883_57607614_57608519_57608738_57609076
H1_mix_00022033	chr12	+	3504	4	NIC	ENSG00000178498.16	novel	2067	6	NA	NA	2	0	intron_retention	FALSE	canonical	3	23	junction_2	52.2323867176508	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGCCACACCCGTTCTT	10	True	NA	17	True	AATAAA	-23	NA	57604835	57609800	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_57606253_57606442_57606519_57606883_57607614_57608519
H1_mix_00022034	chr12	+	2221	7	NIC	ENSG00000178498.16	novel	2028	7	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	49.9388514974953	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGCCACACCCGTTCTT	11	True	NA	17	True	AATAAA	-23	NA	57604836	57609800	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_57604859_57605343_57605732_57606189_57606253_57606442_57606519_57606883_57607614_57608519_57608738_57609076
H1_mix_00022035	chr12	+	2265	16	FSM	ENSG00000240771.8	ENST00000333972.11	2246	16	-19	0	-19	0	multi-exon	FALSE	canonical	0	0	junction_1	1.45143607047182	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGGCTGCTGTCTTGGCA	-8	True	NA	27	True	AATAAA	-16	NA	57610160	57617243	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57610316_57610569_57610685_57612929_57613145_57613263_57613360_57613439_57613517_57613693_57613761_57614015_57614120_57614330_57614401_57614515_57614606_57614688_57614782_57614966_57615018_57615236_57615315_57615511_57615713_57615836_57616018_57616283_57616496_57616783
H1_mix_00022037	chr12	+	582	5	FSM	ENSG00000135452.10	ENST00000552816.5	582	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	70.5775282933598	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCAGAGCCCCACATGCC	-9	True	NA	NA	False	NA	NA	NA	57745038	57747025	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57745232_57745744_57745913_57746175_57746257_57746588_57746721_57747017
H1_mix_00022038	chr12	+	2784	4	FSM	ENSG00000123427.17	ENST00000333012.5	2762	4	-22	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	4.49691252107735	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTGTTGTTGTTTTG	-3	True	NA	12	True	AATAAA	-19	NA	57772655	57782541	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57772902_57773016_57773129_57774628_57774768_57780254
H1_mix_00022039	chr12	+	578	5	FSM	ENSG00000123297.20	ENST00000417094.5	558	5	-20	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	153.459074348831	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAGCAAAGCTGCCAAGC	-12	True	NA	NA	False	NA	NA	NA	57782760	57786200	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57782859_57783109_57783284_57783614_57783653_57783940_57784171_57786162
H1_mix_00022041	chr12	+	885	1	FSM	ENSG00000270039.1	ENST00000602802.1	578	1	-294	-13	-294	13	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTGAAGATAGTTTT	NA	False	NA	15	True	AATAAA	-27	NA	57803543	57804428	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_57803500_57804400
H1_mix_00022043	chr12	+	6215	27	ISM	ENSG00000061987.16	ENST00000547095.5	5708	36	0	30007	0	-8565	5prime_fragment	TRUE	canonical	3	8	junction_2	20.2091138851675	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTCTCAAACCACCAGT	27	False	NA	NA	False	NA	NA	NA	62466847	62562858	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_62467319_62470700_62470779_62484169_62484234_62493914_62494043_62495015_62495148_62498918_62499049_62500782_62500881_62501572_62501699_62508285_62508481_62524514_62524640_62525083_62525221_62525948_62526103_62532437_62532671_62534844_62534927_62535524_62535710_62537150_62537264_62537601_62537707_62538095_62538177_62538251_62538326_62538414_62538506_62543096_62543199_62544897_62545009_62546896_62547073_62549667_62549831_62552880_62553175_62555993_62556193_62560490
H1_mix_00022045	chr12	+	1808	1	FSM	ENSG00000275180.1	ENST00000619323.1	491	1	-994	-323	-994	323	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAACAAGATACTTGTAT	10	False	NA	NA	False	AATGAA	-35	NA	62602914	62604722	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_62602900_62604700
H1_mix_00022050	chr12	+	1056	1	FSM	ENSG00000280181.1	ENST00000623975.1	1056	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCGCCATTGCAATCCAGC	NA	False	NA	NA	False	NA	NA	NA	64709457	64710513	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_64709500_64710500
H1_mix_00022051	chr12	+	677	1	FSM	ENSG00000276853.1	ENST00000621847.1	656	1	-143	122	-143	-122	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGGCAGGTGTGTTCATT	1096	False	NA	NA	False	NA	NA	NA	65171118	65171795	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_65171100_65171800
H1_mix_00022052	chr12	+	4377	7	FSM	ENSG00000174099.12	ENST00000308259.10	4377	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	2.3392781412697	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTCTTTGATTCCTGA	-36	True	NA	NA	False	AATAAA	-18	NA	65278682	65466907	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_65278866_65308528_65308656_65326825_65326935_65328525_65328604_65368997_65369027_65453727_65453826_65463154
H1_mix_00022053	chr12	+	510	2	FSM	ENSG00000239335.4	ENST00000510317.2	623	2	113	0	113	0	multi-exon	FALSE	canonical	1	1	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCCGCCATCCCATCTAGG	8	True	NA	NA	False	NA	NA	NA	66130863	66134449	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_66130976_66134051
H1_mix_00022054	chr12	+	8287	12	FSM	ENSG00000090376.11	ENST00000261233.9	8328	12	0	41	0	-41	multi-exon	FALSE	canonical	1	3	junction_1	2.39144480690289	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATTTTTATTAGAAAAGAA	-5	True	NA	NA	False	AATGAA	-7	NA	66189213	66254581	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_66189433_66203710_66203894_66209455_66209521_66210146_66210202_66211445_66211598_66217170_66217236_66226722_66226838_66228251_66228371_66244485_66244685_66244947_66245011_66245097_66245263_66247694
H1_mix_00022056	chr12	+	290	1	FSM	ENSG00000256037.1	ENST00000542687.1	604	1	426	-112	426	112	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAAAAATAAA	297	False	NA	NA	False	AATAAA	-14	NA	67351861	67352151	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_67351900_67352200
H1_mix_00022057	chr12	+	790	1	Intergenic	novelGene_315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTAAACCGGCAGTGTAAA	NA	False	NA	NA	False	AAAACA	-1	NA	67766935	67767725	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_67766900_67767700
H1_mix_00022058	chr12	+	632	1	Intergenic	novelGene_317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAGTCAGCGAAGGGA	NA	False	NA	NA	False	NA	NA	NA	67771355	67771987	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_67771400_67772000
H1_mix_00022062	chr12	+	371	1	FSM	ENSG00000175782.11	ENST00000399333.4	1553	1	749	433	749	-197	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTGAAGACCAACAGCCA	5303	False	NA	NA	False	NA	NA	NA	68793160	68793531	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_68793200_68793500
H1_mix_00022063	chr12	+	1361	9	FSM	ENSG00000135679.27	ENST00000258148.11	1361	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	10.0374299499424	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATATATTTCTAACTAT	268	False	NA	NA	False	NA	NA	NA	68808463	68839867	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_68808492_68809207_68809293_68813553_68813629_68816811_68816946_68820324_68820375_68828770_68828932_68835828_68835985_68836671_68836750_68839273
H1_mix_00022073	chr12	+	2666	16	FSM	ENSG00000111058.8	ENST00000261206.7	2666	16	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	25.6147526936247	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTGAGGGAAAGCAGAACA	7	True	NA	NA	False	NA	NA	NA	81078056	81255466	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_81078429_81109559_81109705_81134815_81135005_81139130_81139266_81143106_81143248_81151843_81151925_81152000_81152097_81174787_81174940_81199340_81199445_81216900_81216997_81220012_81220077_81231056_81231139_81233348_81233472_81253306_81253407_81253494_81253671_81254856
H1_mix_00022078	chr12	+	2072	3	FSM	ENSG00000120833.14	ENST00000549206.5	2072	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	96	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTATTAAATAAAAAAAACC	10	False	NA	-15	True	NA	NA	NA	93570398	93576174	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_93570666_93572684_93573037_93574721
H1_mix_00022092	chr12	+	3405	1	FSM	ENSG00000255794.10	ENST00000547946.1	687	1	-2718	0	-2718	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGTCTATTTCCTTTA	1053	False	NA	13	True	AATAAA	-15	NA	97561630	97565035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_97561600_97565000
H1_mix_00022093	chr12	+	3241	7	FSM	ENSG00000075415.15	ENST00000546766.5	3236	7	-5	0	0	0	multi-exon	FALSE	canonical	3	2121	junction_1	336.071916906684	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTTGCAGCATGTACT	3	False	NA	26	True	AGTAAA	-16	NA	98593649	98601997	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_98593741_98593974_98595849_98597855_98598036_98598521_98598704_98599954_98600128_98601170_98601282_98601367
H1_mix_00022094	chr12	+	5987	8	FSM	ENSG00000075415.15	ENST00000228318.8	5987	8	0	0	0	0	multi-exon	FALSE	canonical	1	37	junction_2	1248.67591913211	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTGTTGAATCATTTGT	-2	True	NA	12	True	AATAAA	-9	NA	98593685	98606367	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_98593741_98593974_98594136_98595432_98595558_98597855_98598036_98598521_98598704_98599954_98600128_98601170_98601282_98601367
H1_mix_00022096	chr12	+	1585	8	FSM	ENSG00000120800.5	ENST00000551825.1	1585	8	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_6	15.5655296821443	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGGAGGGTGAGGCAG	13	True	NA	NA	False	AATACA	-27	NA	101280127	101291427	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_101280328_101281115_101281197_101285569_101285637_101285748_101285882_101286320_101286510_101288959_101289042_101290136_101290275_101290732
H1_mix_00022099	chr12	+	3477	17	FSM	ENSG00000166598.16	ENST00000679779.1	3459	17	-17	-1	9	1	multi-exon	FALSE	canonical	3	4394	junction_7	654.747825382987	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTCAGTGTCTTGACTGT	803	False	NA	10	True	AATAAA	-12	NA	103930340	103947923	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_103930565_103931520_103931624_103932276_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103942797_103943073_103943320_103943737_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
H1_mix_00022100	chr12	+	2817	19	FSM	ENSG00000166598.16	ENST00000680370.1	2816	19	0	-1	0	1	multi-exon	FALSE	canonical	2	11	junction_2	1830.62059908048	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTCAGTGTCTTGACTGT	13	True	NA	10	True	AATAAA	-12	NA	103930409	103947923	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_103930565_103931520_103931624_103931710_103931749_103932276_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943320_103943737_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
H1_mix_00022101	chr12	+	3366	12	FSM	ENSG00000166598.16	ENST00000681245.1	3365	12	0	-1	0	1	multi-exon	FALSE	canonical	3	4394	junction_2	707.710112479527	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTCAGTGTCTTGACTGT	2406	False	NA	10	True	AATAAA	-12	NA	103936676	103947923	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
H1_mix_00022105	chr12	+	459	3	FSM	ENSG00000151131.11	ENST00000280749.5	459	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	452.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTGACATATGTCTGCAA	19	True	NA	5	True	AATAAA	-16	NA	104986338	104994720	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_104986468_104988166_104988254_104994477
H1_mix_00022118	chr12	+	2323	7	FSM	ENSG00000076513.17	ENST00000550404.1	2350	7	0	27	0	-27	multi-exon	FALSE	canonical	1	1	junction_6	35.6483597877315	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGTCCATCTCAAAAAAAAA	-3	True	NA	NA	False	NA	NA	NA	109999429	110022437	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_109999785_110012004_110012138_110013124_110013250_110016387_110016434_110018344_110018489_110019138_110019329_110021107
H1_mix_00022133	chr12	+	1934	13	NIC	ENSG00000089022.14	novel	11083	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	176.578987676589	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATTGATTAAAGCTGCTG	1	True	NA	12	True	AATAAA	-16	NA	111842227	111893157	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_111842770_111865249_111865324_111866155_111866232_111867571_111867670_111868752_111868862_111871084_111871181_111880446_111880528_111883580_111883769_111885915_111886037_111888487_111888619_111888884_111889007_111890039_111890145_111892966
H1_mix_00022134	chr12	+	2188	13	NIC	ENSG00000089022.14	novel	11083	14	NA	NA	1	257	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	169.780802310901	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGATTCTGGTTTCAATT	2	True	NA	12	True	AGTAAA	-17	NA	111842228	111893418	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_111842770_111865249_111865324_111866155_111866232_111867571_111867670_111868752_111868862_111871084_111871181_111880446_111880528_111883580_111883769_111885915_111886037_111888487_111888619_111888884_111889001_111890039_111890145_111892966
H1_mix_00022138	chr12	+	2140	6	ISM	ENSG00000135144.8	ENST00000547974.5	2175	8	3479	-28	-145	0	3prime_fragment	FALSE	canonical	3	18	junction_4	5.81721582889959	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGCCTGGTCTTTTCCTGC	NA	False	NA	15	True	AATAAA	-15	NA	113093344	113098025	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_113093701_113094037_113094100_113094788_113094948_113095041_113095204_113095324_113095415_113096714
H1_mix_00022141	chr12	+	2740	2	ISM	ENSG00000186815.13	ENST00000546787.1	312	4	1087	-2564	1087	-6	3prime_fragment	FALSE	canonical	2	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTAAACATGGCTGCTG	NA	False	NA	8	True	ACTAAA	-11	NA	113294105	113298576	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_+_113294229_113295959
H1_mix_00022158	chr12	+	668	1	FSM	ENSG00000088986.11	ENST00000552316.1	670	1	0	2	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATGTGTGTGAATTACAA	1314	False	NA	11	True	AATAAA	-14	NA	120497823	120498491	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_120497800_120498500
H1_mix_00022160	chr12	+	760	5	FSM	ENSG00000022840.17	ENST00000535470.5	760	5	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	450.090754737308	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGATCTCTTCCTGCCAA	NA	False	NA	16	True	AATAAA	-11	NA	120565435	120576882	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_120565530_120566824_120566981_120575630_120575689_120575791_120575951_120576589
H1_mix_00022165	chr12	+	2428	2	FSM	ENSG00000276045.3	ENST00000611718.1	852	2	0	-1576	0	432	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTTCTCCATATGTAT	18	True	NA	10	True	AATAAA	-15	NA	121626815	121643109	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_+_121627175_121641040
H1_mix_00022172	chr12	+	2875	9	NNC	ENSG00000139726.11	novel	2719	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	593.001356975682	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTGAATCATTTTTTTAA	-14	True	NA	17	True	ATTAAA	-18	NA	122752823	122771064	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_122752951_122753692_122753881_122754410_122754494_122762186_122762207_122762844_122762930_122765303_122765388_122767487_122767605_122768781_122768922_122769033
H1_mix_00022177	chr12	+	1074	6	NIC	ENSG00000182196.14	novel	1491	6	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	651.265045891456	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTTCTGTGGCTTT	-18	True	NA	17	True	ATTAAA	-17	NA	122980245	122982909	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_122980386_122981128_122981300_122981594_122981880_122981956_122982075_122982468_122982539_122982619
H1_mix_00022181	chr12	+	2767	8	NIC	ENSG00000183955.14	novel	1000	6	NA	NA	-156	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	49.3947035085127	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCACGTGTGTGTCTTTCT	118	False	NA	3	True	ATTAAA	-19	NA	123389114	123409353	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_123389183_123389432_123389555_123390629_123390787_123395046_123395267_123396344_123396433_123403572_123403633_123404883_123405075_123407492
H1_mix_00022183	chr12	+	2630	15	NNC	ENSG00000111364.16	novel	2656	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	53	junction_12	80.6162489318173	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAGTGTGTAAATGTAG	4213	False	NA	27	True	AATAAA	-21	NA	123602076	123620943	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_123602257_123605930_123605982_123606072_123606160_123607431_123607524_123607599_123607663_123608679_123608830_123609938_123610129_123613169_123613253_123615184_123615317_123616510_123616604_123617757_123617873_123618668_123618838_123619447_123619725_123619963_123620581_123620612
H1_mix_00022184	chr12	+	2670	15	NNC	ENSG00000111364.16	novel	2656	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	90.4479780575214	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAGTGTGTAAATGTAG	5	True	NA	27	True	AATAAA	-21	NA	123602124	123620943	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_123602257_123605930_123605982_123606072_123606160_123607431_123607524_123607599_123607663_123608679_123608830_123609938_123610129_123613169_123613253_123615184_123615317_123616510_123616604_123617757_123617873_123618596_123618838_123619431_123619725_123619963_123620581_123620612
H1_mix_00022201	chr12	+	9749	38	NIC	ENSG00000183495.14	novel	12289	53	NA	NA	-23932	0	intron_retention	FALSE	canonical	3	10	junction_33	29.0189479924037	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTTTCATTTTGTCTT	NA	False	NA	7	True	AATAAA	-14	NA	132005013	132080457	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_132005185_132006111_132006303_132006699_132006878_132011497_132011635_132013008_132013179_132013489_132013665_132013776_132013914_132017534_132017722_132018209_132018377_132020048_132020219_132021078_132021322_132023776_132023942_132025645_132025805_132027436_132027532_132028016_132028289_132029700_132029904_132029988_132030159_132031952_132032150_132037681_132037794_132037952_132038097_132043303_132043463_132043644_132043729_132044176_132044312_132044670_132044716_132044799_132044954_132045318_132045561_132045726_132045901_132050322_132050460_132050598_132050656_132053145_132053225_132053342_132053598_132054973_132055020_132055098_132055209_132064667_132064887_132066773_132066970_132067361_132067487_132069494_132069642_132076515
H1_mix_00022203	chr12	+	2560	5	NIC	ENSG00000185684.16	novel	1994	6	NA	NA	-2	0	intron_retention	FALSE	canonical	2	8	junction_2	24.0143186453416	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTAGTTCTGTTAACTTT	-18	True	NA	15	True	ATTAAA	-17	NA	132084280	132108899	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_132085317_132090848_132090944_132103996_132104171_132104377_132105305_132108571
H1_mix_00022204	chr12	+	7496	12	NIC	ENSG00000185684.16	novel	1366	10	NA	NA	0	3	combination_of_known_splicesites	FALSE	canonical	2	5	junction_6	16.9749450759223	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTCTCTTGTCTTTTAT	14	True	NA	NA	False	AATATA	-4	NA	132084312	132131642	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_+_132084400_132085256_132085317_132090848_132090944_132103996_132104171_132104377_132105305_132108571_132108683_132120419_132120602_132121439_132121580_132121924_132121981_132125193_132125397_132125853_132126048_132126375
H1_mix_00022208	chr12	+	3313	15	NNC	ENSG00000112787.14	novel	1246	9	NA	NA	-67	-892	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_11	110.930388173882	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTTTTTTGCCTTATT	-35	True	NA	16	True	ATTAAA	-17	NA	132559979	132584296	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_132560231_132567480_132567527_132569925_132570242_132570334_132570541_132571306_132571525_132572287_132572345_132572526_132572623_132574089_132574159_132574318_132574349_132574492_132574565_132576798_132576932_132581312_132581517_132581740_132581825_132582061_132582267_132582970
H1_mix_00022209	chr12	+	3180	16	NNC	ENSG00000112787.14	novel	1246	9	NA	NA	0	-892	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_5	105.303286853841	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTTTTTTGCCTTATT	32	True	NA	16	True	ATTAAA	-17	NA	132560046	132584296	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_132560231_132567480_132567527_132569925_132570242_132570337_132570541_132571067_132571137_132571306_132571525_132572287_132572339_132572526_132572623_132574089_132574159_132574318_132574349_132574492_132574565_132576798_132576932_132581438_132581517_132581740_132581825_132582061_132582267_132582970
H1_mix_00022216	chr12	+	548	4	NNC	ENSG00000198040.11	novel	647	4	NA	NA	2	-2242	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_3	102.472760608206	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTTTTTCAATGAATC	3432	False	NA	NA	False	ATTAAA	-24	NA	133041279	133054760	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_+_133041483_133047954_133048082_133048752_133048849_133054638
H1_mix_00022218	chr12	-	1463	2	NNC	ENSG00000226210.3	novel	1817	11	NA	NA	-92	-11703	at_least_one_novel_splicesite	FALSE	canonical	3	310	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTACAGATGAGGAAACTGA	NA	False	NA	NA	False	NA	NA	NA	32107	26224	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_26955_31374
H1_mix_00022219	chr12	-	218	2	FSM	ENSG00000010379.16	ENST00000534887.1	525	2	299	8	299	-8	multi-exon	FALSE	canonical	1	1	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCGTGTGGGGAGCTCCTG	NA	False	NA	NA	False	NA	NA	NA	238010	237157	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_237291_237925
H1_mix_00022220	chr12	-	4415	1	FSM	ENSG00000261799.1	ENST00000570140.1	3170	1	-1110	-135	-1110	135	mono-exon	FALSE	NA	NA	NA	NA	NA	601	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTGTGAAGAATGCCAAG	NA	False	NA	1	True	ATTAAA	-23	NA	278233	273818	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_273800_278200
H1_mix_00022221	chr12	-	10933	29	NIC	ENSG00000073614.13	novel	10701	28	NA	NA	0	150	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	16.1985055370134	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCTTTTGAAGTTGTCAG	-33	True	NA	NA	False	NA	NA	NA	389320	279906	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_285663_286125_286208_292758_293170_295572_295794_297040_297201_306945_307090_307453_308006_309802_309965_310884_311065_313055_313195_318105_318462_320994_321110_322416_322568_323081_323207_323599_323782_328834_329030_331818_331939_333486_333650_334240_334423_350620_350780_352204_352325_354075_354235_355157_355250_356431_356538_362962_363098_365933_366105_384030_384154_385896_385975_388926
H1_mix_00022222	chr12	-	10493	29	NNC	ENSG00000073614.13	novel	10701	28	NA	NA	0	-150	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	16.2532571304012	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAACAGTACAAAAGAATGG	-33	True	NA	-87	True	NA	NA	NA	389320	280206	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_281970_282027_285663_292758_293170_295572_295794_297040_297201_306945_307090_307453_308006_309802_309965_310884_311065_313055_313195_318105_318462_320994_321110_322416_322568_323081_323207_323599_323782_328834_329030_331818_331939_333486_333650_334240_334423_350620_350780_352204_352325_354075_354235_355157_355250_356431_356538_362962_363098_365933_366105_384030_384154_385896_385975_388926
H1_mix_00022223	chr12	-	1597	12	FSM	ENSG00000002016.18	ENST00000358495.8	3023	12	62	1364	-4	134	multi-exon	TRUE	canonical	2	9	junction_2	2.56808125305919	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGACATTTTAGGAATCAC	60	False	NA	NA	False	AATGAA	-2	NA	949632	913099	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_913453_913893_914122_914430_914533_916343_916484_916638_916821_925449_925526_927144_927264_929818_929887_930050_930145_931219_931322_932974_933077_949601
H1_mix_00022225	chr12	-	433	3	FSM	ENSG00000250132.6	ENST00000539259.1	501	3	68	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAATAAACTGCTTGTAC	2	True	NA	NA	False	NA	NA	NA	991122	976978	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_977107_989808_990042_991050
H1_mix_00022226	chr12	-	1592	1	FSM	ENSG00000243663.1	ENST00000493072.1	781	1	-47	-764	-47	764	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAAGGC	NA	False	NA	NA	False	TTTAAA	-3	NA	1758058	1756466	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_1756500_1758100
H1_mix_00022227	chr12	-	593	3	NNC	ENSG00000151065.14	novel	2033	9	NA	NA	2	-5660	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	113.5	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTCTTGTTATCAGATAT	29	True	NA	NA	False	AATAAA	-15	NA	2004425	1997115	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_1997524_1997934_1997976_2004281
H1_mix_00022228	chr12	-	3493	8	FSM	ENSG00000111206.13	ENST00000627656.2	3487	8	0	-6	0	5	multi-exon	FALSE	canonical	3	23	junction_3	135.253201704908	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGGTTTATTGGCGTCT	-2	True	NA	0	True	AATAAA	-23	NA	2877155	2857674	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_2859664_2864319_2864496_2864682_2864756_2866392_2866522_2868562_2868755_2872095_2872245_2873976_2874526_2876919
H1_mix_00022232	chr12	-	1653	9	NIC	ENSG00000111206.13	novel	3475	10	NA	NA	3	-138	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	140.563986764036	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGGACCAGGGAAAGAGG	1	True	NA	NA	False	NA	NA	NA	2877152	2859625	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_2859664_2861298_2861413_2864319_2864496_2864682_2864753_2866392_2866522_2868562_2868755_2872095_2872248_2873976_2874526_2876919
H1_mix_00022236	chr12	-	702	2	FSM	ENSG00000250770.4	ENST00000686448.1	680	2	-37	15	0	-15	multi-exon	FALSE	canonical	1	5	junction_1	0	427	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCATATATACGTAGATTC	-1	True	NA	-10	True	AATAAA	-6	NA	3366149	3331781	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_3332393_3366058
H1_mix_00022237	chr12	-	1709	8	ISM	ENSG00000111224.14	ENST00000416739.5	2428	10	52	15203	-14	2611	5prime_fragment	FALSE	canonical	0	0	junction_1	37.3849254788775	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCATTCAAATTGTGTTG	11	True	NA	NA	False	ATTAAA	-19	NA	3873384	3806249	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_3807104_3814036_3814189_3821872_3822004_3822084_3822158_3826157_3826234_3828909_3829031_3829889_3830019_3873211
H1_mix_00022238	chr12	-	1778	9	NNC	ENSG00000111224.14	novel	4406	8	NA	NA	3	2608	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	37.8277345343334	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAACCATTCAAATTGTG	13	True	NA	NA	False	ATTAAA	-16	NA	3873347	3806252	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_3807104_3811965_3812074_3814036_3814189_3821872_3822004_3822084_3822158_3826157_3826234_3829889_3830019_3863835_3863958_3873211
H1_mix_00022239	chr12	-	2002	9	NIC	ENSG00000111224.14	novel	1197	9	NA	NA	-11	325	combination_of_known_junctions	FALSE	canonical	3	36	junction_5	25.611276813154	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATCCATCAGGGCTCTTG	7955	False	NA	NA	False	NA	NA	NA	3873381	3811411	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_3812440_3814036_3814189_3821872_3822004_3822084_3822158_3826157_3826234_3828909_3829031_3829889_3830019_3863835_3863958_3873211
H1_mix_00022240	chr12	-	432	1	Intergenic	novelGene_270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGCGTGGGAACCTAGAGT	NA	False	NA	NA	False	NA	NA	NA	4023543	4023111	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_-_4023100_4023500
H1_mix_00022241	chr12	-	601	2	NIC	ENSG00000255920.4	novel	621	2	NA	NA	-130	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	0	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTATTTATTTATTTTT	555	False	NA	-6	True	AATAAA	-15	NA	4275195	4248766	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_4249194_4275021
H1_mix_00022242	chr12	-	362	1	FSM	ENSG00000213970.4	ENST00000493323.1	440	1	166	-88	-54	88	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCTACAACATTCCAAGGA	NA	False	NA	NA	False	AAAAAG	-40	NA	4324645	4324283	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_4324300_4324600
H1_mix_00022243	chr12	-	4197	25	FSM	ENSG00000047617.17	ENST00000682330.1	3683	25	-512	-2	461	1	multi-exon	FALSE	canonical	1	3	junction_9	5.12195031213697	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATCTGTTGTCTTTGGTG	3336	False	NA	NA	False	AATAAA	-27	NA	5945771	5562652	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_5563569_5565557_5565664_5575833_5576016_5577954_5578008_5578365_5578519_5599483_5599630_5612655_5612757_5612900_5612959_5615185_5615298_5635151_5635348_5647726_5647802_5732519_5732631_5739316_5739400_5744156_5744318_5750835_5750971_5799506_5799572_5806051_5806094_5807312_5807369_5827768_5827821_5830434_5830490_5832451_5832604_5854042_5854142_5921039_5921367_5922619_5922805_5945195
H1_mix_00022247	chr12	-	668	4	NNC	ENSG00000111639.8	novel	898	3	NA	NA	0	70089	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1072.71938963034	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCAGGTGTAGTGGCAG	-5	True	NA	NA	False	NA	NA	NA	6493262	6421796	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_6421832_6492150_6492468_6492861_6492973_6493057
H1_mix_00022248	chr12	-	439	2	FSM	ENSG00000215039.8	ENST00000447687.2	467	2	28	0	28	0	multi-exon	FALSE	canonical	3	28	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAGGGGAACATCACACA	2800	False	NA	NA	False	NA	NA	NA	6448757	6447829	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6448151_6448639
H1_mix_00022249	chr12	-	893	6	Fusion	ENSG00000139190.17_ENSG00000215039.8	novel	3139	4	NA	NA	0	0	multi-exon	FALSE	canonical	1	2	junction_2	16.1418710191849	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAGGGGAACATCACACA	0	True	NA	NA	False	NA	NA	NA	6470645	6447829	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr12_-_6448151_6448639_6448758_6464889_6464942_6465841_6466001_6466224_6466352_6470529
H1_mix_00022250	chr12	-	502	2	FSM	ENSG00000111639.8	ENST00000538814.5	501	2	0	-1	0	0	multi-exon	FALSE	canonical	3	2394	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGATAGCCACATACTTT	776	False	NA	28	True	AATAAA	-17	NA	6493046	6492150	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6492468_6492861
H1_mix_00022251	chr12	-	2898	18	NNC	ENSG00000111642.16	novel	6491	40	NA	NA	0	51577	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	191.286212845865	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGACGGCTGTAAGGG	424	False	NA	NA	False	NA	NA	NA	6587949	6518504	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_6518535_6570081_6570694_6570868_6571033_6573073_6573270_6577784_6577918_6578028_6578138_6578408_6578547_6578845_6578918_6581043_6581174_6581290_6581389_6581648_6581815_6582136_6582282_6582614_6582749_6582847_6582937_6583026_6583114_6583197_6583379_6587383_6587560_6587711
H1_mix_00022252	chr12	-	2667	16	NNC	ENSG00000111641.12	novel	2791	17	NA	NA	29	-2	at_least_one_novel_splicesite	FALSE	non_canonical	1	1	junction_2	114.16413135871	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCACTGAGTATTTTTGA	9170	False	NA	-6	True	AATACA	-15	NA	6568246	6556872	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_6557643_6560097_6560323_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563513_6563611_6563772_6563890_6563947_6566100_6566337_6566528_6566618_6566776_6566823_6567815_6567923_6568138
H1_mix_00022253	chr12	-	2693	17	NIC	ENSG00000111641.12	novel	2791	17	NA	NA	26	-2	combination_of_known_junctions	FALSE	non_canonical	1	3	junction_11	128.250974655166	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCACTGAGTATTTTTGA	9167	False	NA	-6	True	AATACA	-15	NA	6568249	6556872	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563513_6563611_6563772_6563890_6563947_6564149_6564249_6566100_6566325_6566528_6566618_6566776_6566823_6567815_6567923_6568206
H1_mix_00022254	chr12	-	2710	16	NIC	ENSG00000111641.12	novel	2791	17	NA	NA	1	-2	combination_of_known_junctions	FALSE	non_canonical	3	103	junction_15	74.9603154268236	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCACTGAGTATTTTTGA	7	True	NA	-6	True	AATACA	-15	NA	6568285	6556872	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563513_6563611_6563772_6563890_6563947_6566100_6566337_6566528_6566618_6566776_6566823_6567815_6567923_6568138
H1_mix_00022256	chr12	-	6456	40	NIC	ENSG00000111642.16	novel	6673	40	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_15	206.036824166355	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGTGCTCTGGTTCAGT	8	True	NA	-17	True	AATAAA	-13	NA	6607373	6570086	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_6570694_6570868_6571033_6573073_6573270_6577784_6577918_6578028_6578138_6578408_6578547_6578845_6578918_6581043_6581174_6581290_6581389_6581648_6581815_6582136_6582282_6582614_6582749_6582847_6582937_6583026_6583114_6583197_6583376_6587383_6587560_6587711_6587950_6588297_6588423_6591465_6591584_6591693_6591826_6591915_6592058_6592392_6592567_6592695_6592818_6593090_6593229_6593415_6593617_6594458_6594651_6595333_6595431_6596005_6596138_6597893_6598100_6598221_6598426_6599772_6600013_6600216_6600396_6600533_6600670_6600925_6601054_6601288_6601531_6601647_6601767_6601959_6602155_6602375_6602498_6606273_6606452_6607299
H1_mix_00022257	chr12	-	6495	41	NIC	ENSG00000111642.16	novel	6499	41	NA	NA	32	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_40	205.540020433978	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGCATAAAAAACCACAGCAA	7205	False	NA	5	True	AATAAA	-31	NA	6614133	6570144	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_6570694_6570868_6571033_6573073_6573270_6577784_6577918_6578028_6578138_6578408_6578547_6578845_6578918_6581043_6581174_6581290_6581389_6581648_6581815_6582136_6582282_6582614_6582749_6582847_6582937_6583026_6583114_6583197_6583379_6587383_6587560_6587711_6587950_6588297_6588423_6591465_6591584_6591693_6591826_6591915_6592058_6592392_6592567_6592695_6592818_6593090_6593229_6593415_6593617_6594458_6594651_6595333_6595431_6596005_6596138_6597893_6598100_6598221_6598426_6599772_6600013_6600216_6600396_6600533_6600670_6600925_6601054_6601288_6601531_6601647_6601767_6601959_6602155_6602375_6602498_6606273_6606452_6607299_6607418_6614083
H1_mix_00022260	chr12	-	555	4	FSM	ENSG00000111642.16	ENST00000545584.2	555	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	99.2818658612382	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGGAGGAGGAGGAGG	-7	True	NA	44	True	AAGAAA	-27	NA	6606682	6601999	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6602155_6602375_6602498_6606273_6606452_6606582
H1_mix_00022261	chr12	-	1907	10	FSM	ENSG00000111644.8	ENST00000229243.7	1905	10	0	-2	0	2	multi-exon	FALSE	canonical	0	0	junction_4	2.48451997499977	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGGCCTGTTCTGGTT	-14	True	NA	NA	False	CATAAA	-16	NA	6647432	6638072	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6638405_6638953_6639038_6640059_6640228_6640342_6640523_6643538_6643672_6644136_6644606_6645219_6645338_6646482_6646578_6646793_6647013_6647323
H1_mix_00022264	chr12	-	2942	10	NIC	ENSG00000126746.18	novel	3266	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_9	66.0807586719967	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGGCAGTGGAGCTACT	28	True	NA	-2	True	AATAAA	-15	NA	6689456	6666476	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_6668116_6669030_6669190_6670759_6670839_6673215_6673441_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166_6688227_6689367
H1_mix_00022266	chr12	-	2960	11	NIC	ENSG00000126746.18	novel	3008	11	NA	NA	12	3	combination_of_known_junctions	FALSE	canonical	3	28	junction_10	92.4688596231185	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATTTGATGTTTTGTTT	8522	False	NA	-26	True	TATAAA	-21	NA	6688884	6666734	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_6668116_6669030_6669190_6670759_6670839_6672349_6672533_6673215_6673441_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166_6688227_6688702
H1_mix_00022269	chr12	-	1270	6	NNC	ENSG00000139200.14	novel	2711	5	NA	NA	131	1579	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	44.4549209874452	423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAATACACCAGCAAGGT	546	False	NA	-34	True	AATAAA	-1	NA	6700299	6692211	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_6692447_6695429_6695652_6696442_6696525_6697286_6697793_6698044_6698105_6700134
H1_mix_00022270	chr12	-	1557	10	NNC	ENSG00000089693.11	novel	1555	9	NA	NA	0	36224	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1101.75833652338	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATTCATAAATACGTCAAC	-10	True	NA	NA	False	NA	NA	NA	6753117	6711771	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_6711799_6747996_6748548_6748769_6748983_6749847_6750008_6750176_6750306_6750712_6750767_6751640_6751677_6751924_6752055_6752284_6752363_6752938
H1_mix_00022271	chr12	-	1558	10	NNC	ENSG00000089693.11	novel	1555	9	NA	NA	0	36224	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1101.75833652338	4137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATTCATAAATACGTCAAC	-10	True	NA	NA	False	NA	NA	NA	6753117	6711771	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_6711799_6747995_6748548_6748769_6748983_6749847_6750008_6750176_6750306_6750712_6750767_6751640_6751677_6751924_6752055_6752284_6752363_6752938
H1_mix_00022272	chr12	-	1563	10	NNC	ENSG00000089693.11	novel	1555	9	NA	NA	0	30120	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1101.75833652338	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAGAAAAAGAATGAAAG	-10	True	NA	NA	False	NA	NA	NA	6753117	6717875	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_6717903_6747990_6748548_6748769_6748983_6749847_6750008_6750176_6750306_6750712_6750767_6751640_6751677_6751924_6752055_6752284_6752363_6752938
H1_mix_00022274	chr12	-	1330	10	NNC	ENSG00000215021.10	novel	1379	10	NA	NA	0	44609	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	611.957877998514	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTAATTAAAAGCAAACCAG	4	True	NA	NA	False	NA	NA	NA	6970618	6920717	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_6920743_6965354_6965715_6966419_6966501_6967170_6967249_6967675_6967780_6967891_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
H1_mix_00022275	chr12	-	1232	8	NIC	ENSG00000215021.10	novel	1354	9	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	85	junction_3	629.574102882582	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCAAGGCTTCACGTGTT	0	True	NA	-23	True	AATAAA	-19	NA	6970664	6965353	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_6965713_6966423_6966501_6967170_6967239_6967891_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
H1_mix_00022276	chr12	-	856	4	FSM	ENSG00000215021.10	ENST00000546111.5	858	4	0	2	0	-2	multi-exon	FALSE	canonical	0	0	junction_2	698.399280895646	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCAAGGCTTCACGTGTT	8785	False	NA	-23	True	AATAAA	-19	NA	6970751	6965353	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_6965713_6966423_6966501_6970195_6970281_6970416
H1_mix_00022279	chr12	-	374	3	FSM	ENSG00000177675.9	ENST00000543841.5	591	3	217	0	217	0	multi-exon	FALSE	canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTGAATGTTTGTGTTT	7304	False	NA	NA	False	AATAAA	-28	NA	7367331	7354959	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_7355131_7357379_7357487_7367235
H1_mix_00022280	chr12	-	732	1	FSM	ENSG00000256331.1	ENST00000417799.2	865	1	196	-63	196	63	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATTTGTTAAGTCTCT	5118	False	NA	NA	False	AATATA	-18	NA	7605018	7604286	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_7604300_7605000
H1_mix_00022282	chr12	-	294	1	NIC	ENSG00000173262.12	novel	3699	13	NA	NA	18009	-391	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCCCTGAGACCCGTGG	NA	False	NA	NA	False	NA	NA	NA	7814756	7814462	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_7814500_7814800
H1_mix_00022283	chr12	-	205	2	FSM	ENSG00000173262.12	ENST00000539738.1	545	2	0	340	0	19	multi-exon	FALSE	canonical	3	50	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGACTAGAAACTGGGC	NA	False	NA	NA	False	NA	NA	NA	7832765	7831603	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_7831765_7832721
H1_mix_00022284	chr12	-	3838	11	NNC	ENSG00000059804.16	novel	3827	10	NA	NA	0	33079	intron_retention	FALSE	non_canonical	0	0	junction_1	1034.13308621279	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCCGGGCGTGGTGGTAC	156	False	NA	NA	False	AAAAAG	-1	NA	7936167	7886150	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_7886182_7919229_7921632_7922820_7923025_7924409_7924512_7925843_7925949_7929683_7929872_7930479_7930643_7931244_7931486_7932986_7933148_7933809_7933903_7936019
H1_mix_00022285	chr12	-	3854	11	NNC	ENSG00000059804.16	novel	3827	10	NA	NA	0	33079	intron_retention	FALSE	non_canonical	0	0	junction_1	1034.13308621279	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCCGGGCGTGGTGGTAC	1	True	NA	NA	False	AAAAAG	-1	NA	7936184	7886150	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_7886181_7919229_7921632_7922820_7923025_7924409_7924512_7925843_7925949_7929683_7929872_7930479_7930643_7931244_7931486_7932986_7933148_7933809_7933903_7936019
H1_mix_00022286	chr12	-	8805	19	NNC	ENSG00000214826.5	novel	2947	27	NA	NA	25	960	intron_retention	FALSE	canonical	3	23	junction_2	40.5188570640607	65	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGAGTTTTTCATTGA	-3	True	NA	NA	False	ATTAAA	-16	NA	9448204	9417712	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_9419574_9419980_9420082_9420172_9420256_9420514_9424641_9425470_9425603_9425715_9425825_9426081_9426121_9427632_9427701_9427820_9427866_9429131_9429212_9429559_9429607_9430587_9430741_9432365_9433416_9434094_9434141_9436946_9437105_9437402_9437490_9438010_9438260_9443534_9443683_9447981
H1_mix_00022287	chr12	-	1176	5	NNC	ENSG00000214826.5	novel	2947	27	NA	NA	417	-17808	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_4	57.7900294168466	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGGTTTCCACTTGATG	1978	False	NA	NA	False	CATAAA	-18	NA	9447812	9436480	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_9437105_9437402_9437490_9438010_9438260_9443534_9443683_9447744
H1_mix_00022288	chr12	-	622	3	FSM	ENSG00000256288.1	ENST00000539009.1	649	3	27	0	27	0	multi-exon	FALSE	canonical	0	0	junction_2	12.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGACTCTTCGTATATT	NA	False	NA	-15	True	AATAAA	-20	NA	10338265	10332860	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_10333064_10336111_10336310_10338044
H1_mix_00022289	chr12	-	361	1	Intergenic	novelGene_276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCTGATAACAGACGAGCC	NA	False	NA	NA	False	NA	NA	NA	10334626	10334265	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_-_10334300_10334600
H1_mix_00022291	chr12	-	1990	12	NNC	ENSG00000060138.13	novel	1931	10	NA	NA	0	139377	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1508.88064252559	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAATCTGGGTCCAAACA	6	True	NA	NA	False	AAAAAG	-32	NA	10723323	10559711	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_10559741_10637336_10637356_10699077_10699655_10701253_10701354_10701959_10702135_10704050_10704149_10709907_10710115_10713210_10713334_10715693_10715784_10718087_10718122_10719079_10719144_10722849
H1_mix_00022292	chr12	-	1421	9	NNC	ENSG00000060138.13	novel	1931	10	NA	NA	0	30549	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1350.3124406966	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGTGTGGTGACAGGTG	5928	False	NA	NA	False	AGTAAA	-33	NA	10718121	10668539	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_10668566_10699086_10699655_10701253_10701354_10701959_10702135_10704050_10704149_10709907_10710115_10713210_10713334_10715693_10715784_10718087
H1_mix_00022293	chr12	-	1420	9	NNC	ENSG00000060138.13	novel	1931	10	NA	NA	0	30549	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1350.3124406966	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGTGTGGTGACAGGTG	5928	False	NA	NA	False	AGTAAA	-33	NA	10718121	10668539	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_10668567_10699088_10699655_10701253_10701354_10701959_10702135_10704050_10704149_10709907_10710115_10713210_10713334_10715693_10715784_10718087
H1_mix_00022294	chr12	-	1956	11	NNC	ENSG00000060138.13	novel	1931	10	NA	NA	0	30549	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1220.18449834441	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGTGTGGTGACAGGTG	6	True	NA	NA	False	AGTAAA	-33	NA	10723323	10668539	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_10668567_10699090_10699655_10701253_10701354_10701959_10702135_10704050_10704149_10709907_10710115_10713210_10713334_10715693_10715784_10718087_10718122_10719079_10719144_10722849
H1_mix_00022298	chr12	-	1205	6	NIC	ENSG00000060138.13	novel	6393	8	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	1541.59561493927	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTCTTGCTTTTCTGCTT	24	True	NA	-6	True	ATTAAA	-16	NA	10723305	10710350	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_10710789_10713210_10713334_10715693_10715784_10718087_10718122_10719079_10719144_10722849
H1_mix_00022299	chr12	-	876	6	NIC	ENSG00000275778.2	novel	1618	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	29.8020133548054	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGATTGTTGCTTCTCT	10	True	NA	2	True	AATAAA	-18	NA	11171600	10845848	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_10845951_10847044_10847368_10848371_10848408_10973654_10973722_11047019_11047189_11171421
H1_mix_00022301	chr12	-	800	1	FSM	ENSG00000256436.1	ENST00000390675.2	1021	1	324	-103	324	103	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAAAGCCTTTGACCTAA	209	False	NA	NA	False	NA	NA	NA	11031083	11030283	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_11030300_11031100
H1_mix_00022302	chr12	-	8593	16	NNC	ENSG00000070018.9	novel	10252	23	NA	NA	-29718	5605	intron_retention	FALSE	non_canonical	0	0	junction_1	66.4408174409543	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTTTAAATTATGTAGAA	NA	False	NA	NA	False	NA	NA	NA	12164946	12110419	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_12110448_12116024_12121421_12124564_12124663_12125295_12125433_12126690_12126922_12130782_12130894_12131820_12132058_12135174_12135301_12138324_12138535_12147365_12147557_12148941_12149154_12150835_12151039_12158828_12159156_12159779_12159965_12162192_12162420_12164272
H1_mix_00022303	chr12	-	9809	22	NIC	ENSG00000070018.9	novel	10252	23	NA	NA	17	0	intron_retention	FALSE	canonical	0	0	junction_21	56.6984304733437	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGTCCTTTCTTTTCA	18	True	NA	NA	False	AATAAA	-18	NA	12266995	12116024	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_12121421_12124564_12124663_12125295_12125433_12126690_12126922_12130782_12130894_12131820_12132058_12135174_12135301_12138324_12138535_12147365_12147557_12148941_12149154_12150835_12151039_12158828_12159156_12159779_12159965_12162192_12162420_12164272_12164563_12165078_12165296_12179809_12179982_12181042_12181440_12183979_12184112_12186922_12187120_12203202_12203401_12266680
H1_mix_00022306	chr12	-	7563	1	Intergenic	novelGene_291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	280	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTTTACTGCAGTCATT	NA	False	NA	NA	False	ATTAAA	-14	NA	14710574	14703011	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_-_14703000_14710600
H1_mix_00022307	chr12	-	788	3	Antisense	novelGene_ENSG00000214772.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	62	junction_1	92	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	195	False	NA	-5	True	AATAAA	-18	NA	14710058	14705460	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr12_-_14705913_14708056_14708345_14710010
H1_mix_00022308	chr12	-	448	2	FSM	ENSG00000197837.4	ENST00000537853.1	448	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTACACAATACTGGTG	5217	False	NA	NA	False	CATAAA	-9	NA	14770276	14768938	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_14769010_14769899
H1_mix_00022309	chr12	-	504	1	FSM	ENSG00000197837.4	ENST00000539745.2	412	1	10	-102	10	102	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCTGCTCGGGATTAGAC	4372	False	NA	NA	False	NA	NA	NA	14771121	14770617	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_14770600_14771100
H1_mix_00022311	chr12	-	406	2	FSM	ENSG00000134533.6	ENST00000537717.1	582	2	-118	294	20	-294	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAGTGTGTTTCTTTATT	5921	False	NA	NA	False	NA	NA	NA	15221386	15217389	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_15217604_15221194
H1_mix_00022312	chr12	-	3722	20	FSM	ENSG00000151491.14	ENST00000543468.5	3722	20	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_13	9.26913682642161	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTCTGTCTCATTAGCA	374	False	NA	-15	True	AATAAA	-25	NA	15789370	15620157	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_15621431_15623157_15623288_15624226_15624408_15631441_15631665_15640702_15640847_15641721_15641831_15647126_15647261_15650822_15651007_15654144_15654294_15658078_15658154_15658496_15658586_15660613_15660741_15662025_15662100_15666439_15666523_15669386_15669537_15669663_15669826_15670855_15670924_15681225_15681303_15682892_15682973_15789160
H1_mix_00022313	chr12	-	3261	3	ISM	ENSG00000048540.16	ENST00000453727.6	2403	5	5580	-1035	1336	32	3prime_fragment	FALSE	canonical	3	27	junction_2	41	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCTCTAGAAAGCATATGT	9315	False	NA	32	True	NA	NA	NA	16600860	16548339	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_16551328_16560412_16560539_16600713
H1_mix_00022314	chr12	-	3613	6	NIC	ENSG00000048540.16	novel	1489	7	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	42.7485672274522	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGATTGCACTTAATTG	4	True	NA	-2	True	AATAAA	-14	NA	16607122	16548373	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_16551328_16560412_16560539_16598791_16598968_16600654_16600869_16606065_16606133_16607046
H1_mix_00022315	chr12	-	1663	5	NIC	ENSG00000048540.16	novel	3515	5	NA	NA	7	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	39.1814688341313	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGAGTGTGAATCTACT	2997	False	NA	-1	True	AATAAA	-17	NA	16607178	16550203	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_16551328_16560412_16560539_16600654_16600869_16606065_16606133_16607046
H1_mix_00022316	chr12	-	252	1	Intergenic	novelGene_293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCTTTCTCCTTTCAGT	NA	False	NA	NA	False	NA	NA	NA	17026989	17026737	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_-_17026700_17027000
H1_mix_00022317	chr12	-	490	1	FSM	ENSG00000240993.3	ENST00000481078.3	302	1	-192	4	-192	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAAATTAC	NA	False	NA	NA	False	NA	NA	NA	19176781	19176291	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_19176300_19176800
H1_mix_00022318	chr12	-	1488	1	FSM	ENSG00000245205.3	ENST00000359165.5	1405	1	-24	-59	-24	59	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTGTTTCAATTGGCCA	38	False	NA	NA	False	NA	NA	NA	19457672	19456184	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_19456200_19457700
H1_mix_00022319	chr12	-	380	1	FSM	ENSG00000131982.5	ENST00000254302.5	429	1	100	-51	100	51	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGACCCCGTGCAGTGCAT	NA	False	NA	NA	False	ACTAAA	-33	NA	20449983	20449603	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_20449600_20450000
H1_mix_00022320	chr12	-	700	3	FSM	ENSG00000111716.14	ENST00000470985.3	678	3	-22	0	-22	0	multi-exon	FALSE	canonical	3	9895	junction_2	1332.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTTCTGGGATTCCT	5863	False	NA	-14	True	AATAAA	-19	NA	21638560	21635341	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_21635710_21637070_21637195_21638352
H1_mix_00022322	chr12	-	1996	4	FSM	ENSG00000111728.11	ENST00000261197.7	1996	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	4.64279609239471	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGATTTGTTGAGCCACG	209	False	NA	2	True	AATAAA	-25	NA	22334714	22200998	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_22202039_22249005_22249099_22287148_22287294_22333996
H1_mix_00022323	chr12	-	850	9	FSM	ENSG00000111731.13	ENST00000539615.1	850	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	62.0220474911946	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACCTACTACCAACTGCC	NA	False	NA	NA	False	NA	NA	NA	22472305	22449814	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_22449892_22453895_22454043_22456970_22457162_22459491_22459543_22469708_22469796_22470823_22470912_22471398_22471489_22471966_22472066_22472285
H1_mix_00022324	chr12	-	4694	11	FSM	ENSG00000060982.15	ENST00000538118.5	4694	11	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_10	207.508288991067	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACAGAGGCAGAGGCAGG	-13	True	NA	25	True	AAGAAA	-30	NA	24902296	24814802	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_24818050_24829822_24829898_24832722_24832864_24836510_24836597_24842081_24842225_24849785_24849950_24878529_24878650_24881300_24881412_24894274_24894476_24901813_24901886_24901962
H1_mix_00022326	chr12	-	6539	5	FSM	ENSG00000246695.9	ENST00000658700.1	5720	5	-806	-13	0	-2	multi-exon	FALSE	canonical	1	5	junction_1	26.8188366638078	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTTCAGTGTATATATG	698	False	NA	-13	True	AATAAA	-13	NA	25959065	25944858	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_25947623_25952757_25955242_25956226_25956348_25956638_25956762_25958018
H1_mix_00022327	chr12	-	3972	6	FSM	ENSG00000246695.9	ENST00000660703.1	3972	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	29.5743131788382	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGCCATCTCTACTAAAAAT	1403	False	NA	NA	False	NA	NA	NA	25958360	25945340	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_25946136_25947518_25947623_25952757_25955242_25956226_25956348_25956638_25956765_25958018
H1_mix_00022328	chr12	-	4207	4	FSM	ENSG00000246695.9	ENST00000669929.1	3321	4	-886	0	-69	0	multi-exon	FALSE	canonical	2	4	junction_3	30.4740326617051	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGGTGGTGCGCACCTG	629	False	NA	NA	False	AATACA	-12	NA	25959134	25952540	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_25955242_25956226_25956348_25956638_25956765_25957875
H1_mix_00022329	chr12	-	3851	5	FSM	ENSG00000123095.6	ENST00000242728.5	3743	5	-95	-13	-95	13	multi-exon	FALSE	canonical	1	2	junction_4	2.1650635094611	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTTATGTTAGACCCAA	1642	False	NA	NA	False	AAGAAA	-24	NA	26125132	26120016	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_26123169_26123629_26123742_26124071_26124180_26124518_26124583_26124717
H1_mix_00022331	chr12	-	771	1	FSM	ENSG00000273680.1	ENST00000610917.1	651	1	-132	12	-132	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGATTATACTTACCTT	NA	False	NA	NA	False	AATAAA	-8	NA	29333515	29332744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_29332700_29333500
H1_mix_00022332	chr12	-	6080	24	NIC	ENSG00000133704.10	novel	5208	25	NA	NA	65	0	intron_retention	FALSE	canonical	3	180	junction_12	26.3207638319189	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAACTTTTGTGTGTGA	1	True	NA	-11	True	AATAAA	-21	NA	30695804	30628987	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_30632012_30634082_30634287_30636981_30637188_30639514_30639736_30649136_30649233_30652191_30652290_30652966_30653093_30656683_30656751_30661140_30661267_30662326_30662488_30663488_30663655_30665219_30665310_30665728_30665846_30666174_30666252_30669182_30669283_30670961_30671097_30673989_30674075_30674658_30674754_30676497_30676588_30680481_30680639_30681658_30681818_30684300_30684458_30690495_30690578_30695563
H1_mix_00022333	chr12	-	5164	25	NNC	ENSG00000133704.10	novel	5208	25	NA	NA	41	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_13	48.3855321580968	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAACTTTTGTGTGTGA	169	False	NA	-11	True	AATAAA	-21	NA	30695828	30628987	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_30630958_30631894_30632012_30634082_30634287_30636981_30637188_30639514_30639736_30649136_30649233_30652191_30652290_30652966_30653093_30656683_30656751_30661140_30661267_30662326_30662488_30663488_30663655_30665219_30665307_30665728_30665846_30666174_30666252_30669182_30669283_30670961_30671097_30673989_30674075_30674658_30674754_30676497_30676588_30680481_30680639_30681658_30681818_30684300_30684458_30690495_30690578_30695563
H1_mix_00022334	chr12	-	4869	18	NIC	ENSG00000110888.18	novel	4484	18	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	26	junction_4	43.837305375223	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGTTCCTATTTAATT	91	False	NA	-4	True	AATAAA	-16	NA	30754853	30709550	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_30710515_30711565_30711630_30713784_30713886_30714958_30715145_30716507_30716677_30719078_30719226_30720810_30720916_30723258_30723315_30724369_30724452_30725965_30726089_30728647_30729326_30730238_30730283_30731342_30731511_30733628_30733712_30734967_30735207_30741019_30741107_30751070_30751134_30753343
H1_mix_00022335	chr12	-	3315	16	NIC	ENSG00000110888.18	novel	4484	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_15	55.8443869655273	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGTGTTCCTATTTAAT	5	True	NA	-5	True	AATAAA	-15	NA	30754939	30709551	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_30710471_30711565_30711630_30713784_30713886_30714958_30715145_30716507_30716677_30719078_30719226_30723258_30723315_30724369_30724452_30725965_30726089_30728647_30729326_30730238_30730283_30731342_30731511_30734967_30735207_30741019_30741107_30751070_30751134_30754750
H1_mix_00022336	chr12	-	3587	18	NIC	ENSG00000110888.18	novel	4398	17	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_4	40.7632204126257	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCAGTGTTCCTATTTAA	50	False	NA	-6	True	AATAAA	-14	NA	30754894	30709552	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_30710471_30711565_30711630_30713784_30713886_30714958_30715142_30716507_30716677_30719078_30719226_30720810_30720916_30723258_30723315_30724369_30724452_30725965_30726089_30728647_30729326_30730238_30730283_30731342_30731511_30734967_30735207_30741019_30741107_30751070_30751134_30753343_30753560_30754750
H1_mix_00022338	chr12	-	337	1	FSM	ENSG00000226472.8	ENST00000612219.1	629	1	255	37	255	19	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATCCAATATGTATTAAAT	NA	False	NA	NA	False	NA	NA	NA	30978681	30978344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_30978300_30978700
H1_mix_00022339	chr12	-	904	1	FSM	ENSG00000212533.1	ENST00000391231.1	150	1	30	-784	30	784	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCAGGCTCCCAGCCTCA	NA	False	NA	NA	False	NA	NA	NA	31076986	31076082	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_31076100_31077000
H1_mix_00022340	chr12	-	3157	8	NNC	ENSG00000139146.14	novel	2941	6	NA	NA	0	19642	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1333.82365814241	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGCTTAAATTAAACCAATA	-9	True	NA	NA	False	AAAAAG	-1	NA	31326199	31260941	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_31260967_31280583_31282872_31287633_31287785_31293804_31293932_31295233_31295334_31298076_31298225_31304981_31305124_31326023
H1_mix_00022342	chr12	-	2162	5	ISM	ENSG00000170456.16	ENST00000389082.10	9506	21	9	69476	9	0	5prime_fragment	FALSE	canonical	3	20	junction_4	25.9759504157211	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATTGTGCGTTAAATTG	42	False	NA	-25	True	AATAAA	-21	NA	31591127	31451701	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_31452477_31460193_31460382_31479588_31480256_31495809_31495920_31590705
H1_mix_00022344	chr12	-	2005	8	NIC	ENSG00000151743.11	novel	1025	9	NA	NA	-2	-8	combination_of_known_junctions	FALSE	canonical	2	6	junction_7	51.8443510393744	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACCAAGTCAATCACATT	8377	False	NA	-13	True	AATAAA	-17	NA	31729012	31671149	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_31672378_31689006_31689119_31697360_31697418_31697739_31697958_31701862_31702008_31709292_31709426_31714881_31714952_31728970
H1_mix_00022345	chr12	-	694	1	FSM	ENSG00000274105.1	ENST00000620472.1	856	1	206	-44	206	44	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGGGAGATGGGGGAAAGG	NA	False	NA	NA	False	NA	NA	NA	32728818	32728124	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_32728100_32728800
H1_mix_00022347	chr12	-	6105	35	NIC	ENSG00000139116.19	novel	6601	37	NA	NA	-8	-4	combination_of_known_junctions	FALSE	canonical	3	24	junction_7	18.5185775982654	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTATTTTTACTGTATT	636	False	NA	-9	True	AATAAA	-12	NA	39442951	39293234	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_39294518_39301479_39301680_39302964_39303136_39304820_39304939_39307564_39307730_39309585_39309767_39311416_39311554_39318072_39318202_39319905_39320014_39322667_39322883_39325838_39325894_39326263_39326325_39330241_39330263_39330745_39330912_39331689_39331792_39332213_39332409_39332590_39332745_39332892_39333108_39333211_39333281_39337095_39337204_39340164_39340365_39340905_39341095_39341504_39341623_39342033_39342125_39351776_39351981_39356831_39356896_39357247_39357438_39358177_39358374_39363097_39363214_39366349_39366518_39367029_39367165_39367882_39368033_39369728_39369912_39370038_39370262_39442926
H1_mix_00022348	chr12	-	4044	5	FSM	ENSG00000139168.9	ENST00000678375.1	4085	5	41	0	41	0	multi-exon	FALSE	canonical	3	497	junction_3	26.8747093007534	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTAATATTATTATTGTC	5622	False	NA	NA	False	AGTAAA	-27	NA	42320481	42312146	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_42313199_42313689_42313766_42313873_42313987_42317339_42317448_42317786
H1_mix_00022350	chr12	-	3605	3	FSM	ENSG00000134297.7	ENST00000545609.3	876	3	18	-2747	18	-17	multi-exon	FALSE	canonical	0	0	junction_1	26	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAAAAACCATGA	2	True	NA	NA	False	AATAAA	-28	NA	45216006	45173063	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_45176434_45190793_45190962_45215939
H1_mix_00022351	chr12	-	583	5	FSM	ENSG00000134294.14	ENST00000548111.5	583	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	476.170859566186	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGGGTGAGTGAAAGATT	8283	False	NA	NA	False	AAGAAA	-25	NA	46364553	46362289	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_46362382_46362493_46362639_46363725_46363827_46363923_46364004_46364388
H1_mix_00022353	chr12	-	576	6	FSM	ENSG00000134294.14	ENST00000548870.5	576	6	0	0	0	0	multi-exon	FALSE	canonical	3	1008	junction_2	19.135307679784	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTGACTGAAAATGACTCT	5426	False	NA	NA	False	NA	NA	NA	46367410	46364441	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_46364557_46364643_46364703_46365106_46365190_46366863_46366946_46367075_46367169_46367266
H1_mix_00022354	chr12	-	3980	17	NIC	ENSG00000139209.16	novel	3983	17	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_15	17.3056168627414	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATGTGATTTTTGATCT	18	False	NA	-4	True	AATAAA	-18	NA	46832418	46764760	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_46766803_46768309_46768408_46769283_46769429_46775048_46775174_46776903_46777005_46778288_46778369_46778500_46778777_46779610_46779670_46779779_46779863_46779948_46780031_46784541_46784635_46785103_46785178_46787915_46788032_46788527_46788619_46792952_46793184_46803602_46803795_46832326
H1_mix_00022356	chr12	-	4240	28	FSM	ENSG00000079337.16	ENST00000405493.6	5751	28	0	1511	0	1061	multi-exon	FALSE	canonical	1	2	junction_27	4.10994311069069	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATCTGAGCAAGTCAGTG	646	False	NA	NA	False	NA	NA	NA	47758461	47736182	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_47737686_47738021_47738094_47738192_47738248_47738689_47738755_47739142_47739231_47740140_47740192_47740304_47740396_47740641_47740824_47740914_47741041_47741504_47741603_47743529_47743677_47743986_47744069_47746859_47746900_47747543_47747627_47747711_47747863_47748073_47748153_47748453_47748543_47748818_47748932_47749389_47749537_47749740_47749818_47749929_47749991_47750340_47750426_47751047_47751217_47751398_47751521_47751722_47751830_47751915_47751970_47757865_47758079_47758371
H1_mix_00022361	chr12	-	5117	55	NNC	ENSG00000139219.19	novel	5059	54	NA	NA	0	99615	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	12.5718783879051	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAACAGGTTTAATTGACT	0	True	NA	NA	False	NA	NA	NA	48004506	47873351	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_47873382_47972968_47973554_47974088_47974332_47974674_47974863_47975316_47975606_47975962_47976071_47976513_47976568_47976811_47976920_47977101_47977156_47977319_47977428_47977599_47977654_47978009_47978118_47978290_47978399_47978596_47978759_47979510_47979565_47980008_47980063_47980553_47980662_47980914_47980969_47981342_47981397_47981775_47981830_47982106_47982161_47982501_47982610_47982847_47982947_47983092_47983138_47983384_47983439_47983682_47983737_47984086_47984141_47984545_47984600_47984994_47985094_47985533_47985588_47985727_47985827_47985911_47985966_47986335_47986444_47986834_47986889_47987077_47987177_47987268_47987314_47987610_47987710_47989227_47989282_47989760_47989806_47992877_47992932_47993457_47993503_47993808_47993863_47993993_47994048_47994423_47994478_47995254_47995309_47995709_47995764_47995874_47995920_47996547_47996626_47997605_47997708_47997870_47997925_47998031_47998065_47998168_47998202_47998414_47998432_47999918_48000126_48004236
H1_mix_00022362	chr12	-	4682	17	NIC	ENSG00000079387.14	novel	4967	19	NA	NA	17	-225	combination_of_known_splicesites	FALSE	canonical	3	19	junction_16	43.8227965789496	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGAATTTGGGCCCCCT	-6	True	NA	-6	True	AATATA	-18	NA	48106029	48043198	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_48045385_48046355_48046452_48046977_48047063_48048000_48048081_48048928_48049133_48063709_48063842_48065064_48065221_48065595_48065681_48066926_48066966_48071666_48071722_48074323_48074608_48074689_48074794_48083590_48083763_48088800_48088961_48096342_48096428_48097993_48098125_48105401
H1_mix_00022363	chr12	-	4440	16	NIC	ENSG00000079387.14	novel	4967	19	NA	NA	5	-228	combination_of_known_splicesites	FALSE	canonical	2	5	junction_8	61.5813824679721	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTCTGAATTTGGGCCC	18	True	NA	-9	True	AATATA	-15	NA	48105829	48043201	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_48045385_48046355_48046452_48046977_48047063_48048000_48048081_48048928_48049133_48063709_48063842_48065064_48065221_48065595_48065681_48071666_48071722_48074323_48074608_48074689_48074794_48083590_48083763_48088800_48088961_48096342_48096428_48097993_48098125_48105401
H1_mix_00022364	chr12	-	2661	11	NNC	ENSG00000139620.13	novel	2373	10	NA	NA	0	101	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_9	82.7336086484809	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAATCCCAGCACTTTGG	-9	True	NA	NA	False	NA	NA	NA	48682217	48653109	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_48654176_48654940_48655061_48660365_48660620_48667692_48667790_48669105_48669269_48671794_48671963_48679035_48679151_48679654_48679834_48681381_48681642_48681857_48682066_48682186
H1_mix_00022365	chr12	-	2624	12	NNC	ENSG00000139620.13	novel	2373	10	NA	NA	-6	101	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	90.0690277068989	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAATCCCAGCACTTTGG	-5	True	NA	NA	False	NA	NA	NA	48682244	48653109	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_48654176_48654940_48655061_48660365_48660620_48661194_48661244_48662559_48662655_48667692_48667790_48669105_48669269_48671794_48671963_48679035_48679151_48679654_48679834_48681381_48681642_48682186
H1_mix_00022366	chr12	-	2373	10	FSM	ENSG00000139620.13	ENST00000420613.7	2373	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	76.1997051288809	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTCTTCTTTTTACCC	1	True	NA	68	True	ATTAAA	-17	NA	48682238	48653210	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48654176_48654940_48655061_48660365_48660620_48667692_48667790_48669105_48669273_48671798_48671963_48679035_48679151_48679654_48679834_48681381_48681642_48682186
H1_mix_00022367	chr12	-	2060	10	NIC	ENSG00000139620.13	novel	2373	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	88.2232017857736	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTGTTTGAGAATATAG	-9	True	NA	0	True	AAGAAA	-41	NA	48682217	48653400	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_48654176_48654940_48655061_48660467_48660620_48667692_48667790_48669105_48669273_48671798_48671963_48679035_48679151_48679654_48679834_48681381_48681642_48682186
H1_mix_00022368	chr12	-	2458	10	NNC	ENSG00000139620.13	novel	2373	10	NA	NA	23	-3	intron_retention	FALSE	canonical	2	16	junction_9	71.6484903737651	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGTTTTGTTTGAGAAT	51	False	NA	-4	True	AAGAAA	-37	NA	48682188	48653404	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_48654176_48654940_48655061_48660365_48660620_48667692_48667790_48669105_48669269_48671794_48671963_48679035_48679151_48679654_48679834_48681381_48681642_48681857
H1_mix_00022370	chr12	-	6925	8	NIC	ENSG00000129315.11	novel	6788	9	NA	NA	0	0	intron_retention	TRUE	canonical	3	9	junction_4	5.84144237150311	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATTGTTGTTTATGTGT	54	True	NA	0	True	AATAAA	-21	NA	48716675	48688457	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_48694437_48695758_48696163_48698137_48698184_48699777_48699841_48701012_48701074_48705767_48705897_48714442_48714525_48716514
H1_mix_00022371	chr12	-	5884	21	FSM	ENSG00000174233.12	ENST00000550422.5	5877	21	0	-7	0	3	multi-exon	FALSE	canonical	0	0	junction_7	20.5291865401433	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTCTCTGTAGCTGTTC	14	True	NA	0	True	AATAAA	-22	NA	48789037	48766190	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_48768717_48768936_48769062_48770765_48770971_48771709_48771974_48772294_48772425_48772507_48772544_48773468_48773648_48774401_48774519_48774690_48774779_48774956_48775055_48775302_48775451_48775672_48775699_48775962_48776092_48776208_48776351_48776427_48776587_48777103_48777232_48777409_48777522_48777614_48777737_48778107_48778258_48782570_48783439_48788905
H1_mix_00022374	chr12	-	1880	4	FSM	ENSG00000167548.18	ENST00000682693.1	2341	4	461	0	461	0	multi-exon	FALSE	canonical	2	5	junction_3	5.43650214343336	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCAGGGTTGGGGCTGCC	9066	False	NA	NA	False	NA	NA	NA	49024100	49021686	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49021873_49022042_49022152_49022279_49022354_49022589
H1_mix_00022376	chr12	-	9031	32	ISM	ENSG00000167548.18	ENST00000301067.12	20635	55	34	20946	34	-702	5prime_fragment	TRUE	canonical	1	4	junction_19	4.46445086657502	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACCACCTGCACCCGAC	20	True	NA	NA	False	NA	NA	NA	49060760	49039923	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_49041536_49041654_49041706_49041916_49041991_49042088_49042331_49042560_49042646_49042740_49042879_49043075_49043187_49043362_49043429_49043634_49043783_49043867_49043999_49044199_49044305_49044402_49044523_49044743_49044966_49045919_49045968_49046064_49046175_49046259_49046425_49046608_49046791_49047964_49048070_49048658_49048770_49049104_49049219_49049681_49050791_49050885_49052425_49052563_49052710_49052914_49053073_49053206_49053322_49053475_49053642_49053977_49054141_49054306_49054417_49054527_49054752_49054899_49055027_49055275_49055362_49059612
H1_mix_00022377	chr12	-	2083	11	FSM	ENSG00000139636.16	ENST00000552577.5	2083	11	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	26.6045108957109	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTCTCTGTGTATATTT	6508	False	NA	-2	True	AATAAA	-35	NA	49104379	49097136	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49097740_49097943_49098106_49100387_49100455_49100555_49100647_49101450_49101550_49102119_49102197_49102292_49102377_49102467_49102541_49102886_49102952_49103090_49103160_49103686
H1_mix_00022378	chr12	-	1688	5	NNC	ENSG00000167552.15	novel	1777	5	NA	NA	0	50149	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1480.23686871392	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGACAGAACATCATGCAA	7	True	NA	NA	False	NA	NA	NA	49189066	49134536	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_49134570_49184797_49185991_49186309_49186459_49186610_49186834_49188976
H1_mix_00022379	chr12	-	1733	5	NNC	ENSG00000167552.15	novel	1777	5	NA	NA	0	44816	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1480.23686871392	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCGTAGTTTAATTACCA	7	True	NA	NA	False	NA	NA	NA	49189066	49139869	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_49139946_49184795_49185991_49186309_49186459_49186610_49186834_49188976
H1_mix_00022383	chr12	-	2073	2	FSM	ENSG00000186897.5	ENST00000334221.5	2073	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGTGGCTGCTTAACT	19	True	NA	NA	False	AATAAA	-15	NA	49337188	49332408	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49333234_49335940
H1_mix_00022384	chr12	-	1936	16	FSM	ENSG00000187778.14	ENST00000550165.5	1936	16	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_15	201.1618474982	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCTCAGACTCTTCTTT	24	True	NA	-25	True	AAAACA	-45	NA	49568101	49558362	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_49558730_49558842_49558971_49559213_49559302_49559452_49559536_49559728_49559822_49559938_49559968_49560294_49560371_49563000_49563140_49563437_49563547_49564480_49564591_49564736_49564896_49565528_49565668_49566076_49566216_49566721_49566842_49567646_49567750_49568047
H1_mix_00022386	chr12	-	4853	13	NNC	ENSG00000167566.17	novel	4882	13	NA	NA	12	7	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_11	36.1889332377854	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGGCTTGTTGTGTGGGAG	630	False	NA	-1	True	AATAAA	-28	NA	49828401	49791138	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_49792052_49792445_49792589_49792677_49792987_49793351_49793434_49793733_49793897_49794764_49797395_49798349_49798464_49801847_49801968_49802957_49802997_49803096_49803166_49803921_49804051_49805979_49806042_49828321
H1_mix_00022387	chr12	-	3076	18	NNC	ENSG00000161800.13	novel	3229	19	NA	NA	0	43618	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	65.3496319382418	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCTAGGCAAGACACGGT	12	True	NA	NA	False	NA	NA	NA	50025436	49933304	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_49933336_49989164_49990344_49990683_49990793_49991997_49992134_49992244_49992378_49992549_49992656_49994130_49994330_49994413_49994510_49997039_49997205_49999140_49999272_49999615_49999734_50001171_50001253_50002246_50002301_50004234_50004305_50005255_50005393_50006433_50006637_50016630_50016720_50025397
H1_mix_00022388	chr12	-	3083	17	NIC	ENSG00000161800.13	novel	3080	17	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_16	57.8909265343024	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGAGGCTGGTTTTCTT	41	True	NA	NA	False	AGTAAA	-17	NA	50025407	49989163	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_49990344_49990683_49990793_49991997_49992134_49992244_49992378_49992549_49992656_49994130_49994330_49994413_49994510_49997039_49997205_49999140_49999272_49999615_49999734_50001171_50001253_50002246_50002301_50004234_50004305_50005255_50005393_50006433_50006637_50016630_50016716_50025327
H1_mix_00022389	chr12	-	3145	18	NIC	ENSG00000161800.13	novel	2190	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_16	77.3845383911213	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGAGGCTGGTTTTCTT	-13	True	NA	NA	False	AGTAAA	-17	NA	50025461	49989163	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_49990344_49990683_49990793_49991997_49992134_49992244_49992378_49992549_49992656_49994130_49994330_49994413_49994510_49997039_49997205_49999140_49999272_49999615_49999734_50001171_50001253_50002246_50002301_50004234_50004305_50005255_50005393_50006433_50006637_50016630_50016720_50018515_50018590_50025397
H1_mix_00022390	chr12	-	2870	16	NIC	ENSG00000161800.13	novel	3106	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_14	68.3117038939074	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGAGGCTGGTTTTCTT	-15	True	NA	NA	False	AGTAAA	-17	NA	50025463	49989163	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_49990344_49990683_49990793_49991997_49992134_49992244_49992378_49992549_49992656_49994130_49994330_49994413_49994510_49997039_49997205_49999140_49999272_49999615_49999734_50001171_50001253_50002246_50002301_50004234_50004305_50005255_50005393_50016630_50016720_50025397
H1_mix_00022393	chr12	-	3685	12	NNC	ENSG00000050405.14	novel	2457	12	NA	NA	-5	61017	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	57.6135601577405	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAGATACTCAACACAACA	17	True	NA	NA	False	NA	NA	NA	50283489	50114770	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_50114802_50175782_50178070_50181903_50182038_50192451_50192562_50195829_50195888_50200776_50200885_50204551_50204701_50205983_50206069_50222020_50222486_50231664_50231711_50248632_50248775_50283419
H1_mix_00022395	chr12	-	4130	17	NNC	ENSG00000110911.17	novel	3993	17	NA	NA	0	28730	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	97.3835843456175	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGGGCATGATGGTGC	6	True	NA	NA	False	NA	NA	NA	51026365	50950670	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_50950697_50985995_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51026314
H1_mix_00022396	chr12	-	2191	18	NIC	ENSG00000110911.17	novel	2125	18	NA	NA	1	15	combination_of_known_junctions	FALSE	canonical	1	13	junction_1	101.347529813548	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTTATAATCGGCCCTTAA	-7	True	NA	14	True	AATAAA	-33	NA	51026378	50979768	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_50980059_50981638_50981804_50988381_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51026309
H1_mix_00022397	chr12	-	4123	16	FSM	ENSG00000110911.17	ENST00000394904.9	4123	16	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_15	92.720847470003	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTCCTGGGTATTTT	1	True	NA	0	True	ATTAAA	-20	NA	51028242	50985991	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51028176
H1_mix_00022400	chr12	-	3686	15	NIC	ENSG00000135457.11	novel	3807	15	NA	NA	10	45	intron_retention	FALSE	canonical	3	51	junction_1	59.748836552587	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTAATTTCTCTTGGTTT	-19	True	NA	-12	True	ATTAAA	-16	NA	51173124	51093762	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_51095276_51095988_51096041_51098775_51098919_51099654_51099780_51101934_51102026_51103669_51103764_51104154_51104204_51106524_51106614_51107235_51107347_51109120_51109274_51110876_51110984_51116314_51116421_51117670_51117748_51118620_51118773_51172300
H1_mix_00022401	chr12	-	3676	15	NNC	ENSG00000135457.11	novel	3807	15	NA	NA	10	44	intron_retention	FALSE	canonical	3	10	junction_3	69.5752419019459	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTAATTTCTCTTGGTT	-19	True	NA	-13	True	ATTAAA	-15	NA	51173124	51093763	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_51095279_51095988_51096041_51098775_51098919_51099666_51099780_51101934_51102026_51103669_51103764_51104154_51104204_51106524_51106614_51107235_51107347_51109120_51109274_51110876_51110984_51116314_51116421_51117670_51117748_51118620_51118773_51172300
H1_mix_00022402	chr12	-	1862	14	FSM	ENSG00000135457.11	ENST00000548115.5	1862	14	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_9	84.5418561647837	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGGCTGCTCCTTCCTTC	193	False	NA	NA	False	NA	NA	NA	51172912	51095221	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_51095276_51095988_51096041_51098775_51098919_51099654_51099780_51101934_51102026_51103669_51103764_51104154_51104204_51106524_51106614_51107235_51107347_51110876_51110984_51116314_51116421_51117670_51117748_51118620_51118773_51172300
H1_mix_00022403	chr12	-	2458	1	FSM	ENSG00000278126.1	ENST00000620274.1	898	1	-1591	31	-1591	-31	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCCTAATAAAATGAATATT	NA	False	NA	-32	True	ACTAAA	-4	NA	51204172	51201714	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_51201700_51204200
H1_mix_00022404	chr12	-	1375	5	FSM	ENSG00000139629.16	ENST00000603680.5	2206	5	831	0	831	0	multi-exon	FALSE	canonical	3	24	junction_3	3.96074487943871	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	51359395	51353768	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_51354493_51355805_51355959_51357348_51357451_51358129_51358262_51359131
H1_mix_00022405	chr12	-	1859	9	FSM	ENSG00000139629.16	ENST00000603641.1	1859	9	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_5	9.46622284757759	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAACCCACTGGGTGGCAA	3739	False	NA	NA	False	NA	NA	NA	51379781	51354270	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_51354493_51355805_51355959_51357348_51357451_51358129_51358262_51359131_51359333_51364120_51364356_51365429_51365580_51377194_51377368_51379290
H1_mix_00022410	chr12	-	1138	1	FSM	ENSG00000257851.2	ENST00000547726.2	1138	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTTCTAAAAACAGCAGAAAA	NA	False	NA	NA	False	NA	NA	NA	51713606	51712468	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_51712500_51713600
H1_mix_00022411	chr12	-	306	1	FSM	ENSG00000284730.2	ENST00000642069.2	1005	1	368	331	368	-331	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCGGGGCCGCTGGCGCT	6397	False	NA	NA	False	NA	NA	NA	51814557	51814251	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_51814300_51814600
H1_mix_00022412	chr12	-	1477	9	NNC	ENSG00000170421.13	novel	2126	9	NA	NA	-67	5753	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1703.72147353228	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAATTTTAGGTTCATAG	7	True	NA	NA	False	AAAAAG	-8	NA	52902271	52891433	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_52891466_52897186_52897619_52898460_52898520_52898678_52898900_52899774_52900066_52900587_52900684_52901158_52901220_52901863_52902073_52902195
H1_mix_00022413	chr12	-	1788	9	NNC	ENSG00000170421.13	novel	2126	9	NA	NA	0	5753	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1344.35462560107	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAATTTTAGGTTCATAG	2988	False	NA	NA	False	AAAAAG	-8	NA	52905044	52891433	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_52891466_52897186_52897619_52898460_52898520_52898678_52898900_52899774_52900066_52900587_52900684_52901158_52901220_52901863_52902073_52904657
H1_mix_00022414	chr12	-	1791	9	NNC	ENSG00000170421.13	novel	1882	9	NA	NA	0	5753	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1344.35462560107	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAATTTTAGGTTCATAG	2980	False	NA	NA	False	AAAAAG	-8	NA	52905052	52891433	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_52891466_52897191_52897619_52898460_52898520_52898678_52898900_52899774_52900066_52900587_52900684_52901158_52901220_52901863_52902073_52904657
H1_mix_00022415	chr12	-	1891	10	NNC	ENSG00000170421.13	novel	2126	9	NA	NA	6855	5753	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1664.65365099704	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAATTTTAGGTTCATAG	7934	False	NA	NA	False	AAAAAG	-8	NA	52942921	52891433	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_52891466_52897186_52897619_52898460_52898520_52898678_52898900_52899774_52900066_52900587_52900684_52901158_52901220_52901863_52902073_52904657_52905046_52942819
H1_mix_00022416	chr12	-	1753	8	NNC	ENSG00000170421.13	novel	2126	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	26	junction_4	1423.61505918373	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTGTGTGCATCTG	2988	False	NA	-4	True	AATAAA	-25	NA	52905044	52897186	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_52897619_52898460_52898520_52898678_52898900_52899774_52900063_52900587_52900684_52901158_52901220_52901863_52902073_52904657
H1_mix_00022418	chr12	-	592	3	FSM	ENSG00000170421.13	ENST00000549198.1	592	3	0	0	0	0	multi-exon	FALSE	canonical	1	66	junction_1	23	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGGGGTCTGGTGGTGTG	1	True	NA	NA	False	AAAAAG	-11	NA	52949831	52948483	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_52948829_52949455_52949586_52949714
H1_mix_00022419	chr12	-	1562	6	NIC	ENSG00000139631.20	novel	1962	12	NA	NA	8985	-3	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	3.13687742827162	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTCTTTTGGTATGTTTT	8962	False	NA	-3	True	AATAAA	-16	NA	53161391	53157665	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_53158685_53159622_53159713_53159886_53159939_53160119_53160320_53160762_53160845_53161272
H1_mix_00022420	chr12	-	1802	17	NNC	ENSG00000094914.14	novel	1815	16	NA	NA	0	33619	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	101.43653727208	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAAAAAACCAAGAACCCAG	22	True	NA	NA	False	NA	NA	NA	53321563	53273836	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_53273867_53307455_53307714_53307844_53307930_53308051_53308134_53308281_53308350_53308434_53308529_53308724_53308816_53308959_53309021_53309156_53309282_53309600_53309722_53314297_53314442_53314750_53314850_53315093_53315141_53315334_53315427_53315726_53315783_53320564_53320693_53321342
H1_mix_00022421	chr12	-	647	2	FSM	ENSG00000257605.3	ENST00000550263.3	697	2	50	0	50	0	multi-exon	FALSE	canonical	1	2	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGATGGGGAAAGATTTT	44	False	NA	NA	False	ATTAAA	-23	NA	53300314	53298654	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_53299130_53300142
H1_mix_00022423	chr12	-	1705	15	FSM	ENSG00000094914.14	ENST00000394384.7	1703	15	0	-2	0	0	multi-exon	FALSE	canonical	2	14	junction_10	104.591845196615	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTACCAGTCTGTCTTTTC	-11	True	NA	-5	True	AATAAA	-26	NA	53321596	53307456	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_53307714_53307844_53307930_53308051_53308134_53308281_53308350_53308434_53308529_53308724_53308816_53308959_53309021_53309156_53309282_53309600_53309722_53314297_53314442_53315093_53315141_53315334_53315427_53315726_53315783_53320564_53320693_53321342
H1_mix_00022424	chr12	-	4742	10	NIC	ENSG00000139625.13	novel	4319	15	NA	NA	4	-4	intron_retention	FALSE	canonical	3	28	junction_9	22.0856916979699	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATATATATATATATATGCG	7911	False	NA	-12	True	TATAAA	-14	NA	53499611	53481125	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_53481281_53481940_53482212_53482298_53482370_53482564_53483190_53483348_53483487_53483606_53483724_53483910_53484021_53484256_53485215_53485316_53487429_53499426
H1_mix_00022426	chr12	-	1101	1	FSM	ENSG00000270175.1	ENST00000602306.1	775	1	-345	19	-345	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGGTTCTAATGAGT	6241	False	NA	-20	True	ATTAAA	-3	NA	53501281	53500180	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_53500200_53501300
H1_mix_00022427	chr12	-	643	2	FSM	ENSG00000139574.9	ENST00000448979.4	670	2	0	27	0	-27	multi-exon	FALSE	canonical	2	6	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAATAAAATTGTCTGGC	-1	True	NA	-30	True	NA	NA	NA	53507484	53506714	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_53506894_53507020
H1_mix_00022429	chr12	-	762	5	NIC	ENSG00000123415.16	novel	926	5	NA	NA	18	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	80.9444253793922	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGATGCCTACCTTATGG	193	False	NA	-16	True	AATAAA	-34	NA	54188922	54181452	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_54181648_54182503_54182624_54183655_54183960_54187818_54187906_54188866
H1_mix_00022431	chr12	-	3257	2	NNC	ENSG00000094916.16	novel	11546	5	NA	NA	18350	6761	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGGGGCCTCCCTATGT	7569	False	NA	NA	False	NA	NA	NA	54234175	54224180	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_54224208_54230945
H1_mix_00022433	chr12	-	453	2	NNC	ENSG00000094916.16	novel	2627	2	NA	NA	12	-2119	at_least_one_novel_splicesite	FALSE	canonical	3	87	junction_1	0	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGGGTTATCTGAAACAC	4	True	NA	-20	True	ATTAAA	-14	NA	54280110	54273959	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_54274310_54280007
H1_mix_00022434	chr12	-	2542	8	ISM	ENSG00000161642.18	ENST00000546970.5	2494	9	643	-21	139	1	3prime_fragment	FALSE	canonical	2	7	junction_7	25.4189387854724	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGACTCAGACTCTGTCTT	7507	False	NA	-4	True	AATAAA	-27	NA	54385125	54369131	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_54370487_54370625_54370722_54370926_54371097_54371472_54371716_54373972_54374136_54375843_54375955_54384427_54384565_54384858
H1_mix_00022435	chr12	-	653	8	FSM	ENSG00000170627.11	ENST00000552395.5	671	8	0	18	0	-17	multi-exon	FALSE	canonical	1	1	junction_6	2.92072118575155	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACCTTTGATACAGATT	18	True	NA	-26	True	NA	NA	NA	54473570	54455977	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_54456154_54459088_54459126_54460376_54460472_54462108_54462173_54462641_54462726_54463170_54463298_54471232_54471278_54473545
H1_mix_00022436	chr12	-	4238	4	Genic_Genomic	ENSG00000179899.8	novel	3061	1	NA	NA	-367	2053	multi-exon	TRUE	canonical	3	232	junction_2	1053.58340913285	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTCAACATCACTGGAGAA	NA	False	NA	NA	False	AAAAAG	-7	NA	55415154	55409673	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr12_-_55410605_55411720_55414181_55414256_55414512_55414562
H1_mix_00022437	chr12	-	5023	24	NNC	ENSG00000135424.19	novel	4126	25	NA	NA	2	95	intron_retention	FALSE	canonical	1	1	junction_11	29.5243963714147	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAAGATTTGGCAGGATC	-13	True	NA	NA	False	NA	NA	NA	55707902	55684962	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_55685289_55687970_55688097_55688201_55688301_55688843_55688958_55692843_55692976_55693140_55693318_55694020_55694124_55694255_55694331_55694442_55694523_55694614_55694696_55694777_55694971_55695179_55695638_55696282_55696433_55696898_55697069_55697215_55697278_55697450_55697547_55697694_55697823_55697937_55698027_55698382_55698577_55698709_55699990_55700898_55701155_55702871_55702952_55703050_55703179_55707476
H1_mix_00022440	chr12	-	5140	7	FSM	ENSG00000181852.18	ENST00000615206.4	5216	7	76	0	76	0	multi-exon	FALSE	canonical	2	10	junction_6	58.6590904198905	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGTCTGTGGCTGCTTTC	7461	False	NA	-2	True	AATACA	-21	NA	56221625	56202503	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56206799_56207645_56207750_56208162_56208299_56210296_56210569_56213957_56214071_56216428_56216614_56221590
H1_mix_00022441	chr12	-	2942	12	NNC	ENSG00000062485.19	novel	3057	12	NA	NA	0	45160	intron_retention	FALSE	non_canonical	0	0	junction_1	260.436283668846	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGGAGGATACACTGAGA	11	True	NA	NA	False	AAAAAG	-19	NA	56300316	56226538	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_56226583_56271701_56273255_56273586_56273797_56274776_56274879_56275001_56275132_56275995_56276196_56282419_56282609_56282859_56282992_56283791_56283858_56285915_56286024_56286594_56286646_56300159
H1_mix_00022443	chr12	-	911	8	FSM	ENSG00000062485.19	ENST00000546891.5	911	8	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_4	310.955997937106	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGTCAGCGAGAGTTTGC	9941	False	NA	NA	False	NA	NA	NA	56286008	56273745	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56273797_56274776_56274879_56275001_56275132_56275995_56276144_56282419_56282609_56282859_56282992_56283791_56283858_56285915
H1_mix_00022445	chr12	-	4404	30	NNC	ENSG00000111602.12	novel	5158	29	NA	NA	0	75527	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	160.422502506178	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATTCCAATTGTCCTTTG	6	True	NA	NA	False	NA	NA	NA	56449403	56340835	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_56340865_56417122_56417787_56417906_56418009_56418133_56418360_56420568_56420688_56420812_56420882_56420962_56421135_56421350_56421494_56421726_56421810_56421898_56422017_56422105_56422192_56422846_56422993_56423273_56423476_56423583_56423708_56423796_56423895_56424761_56424914_56425014_56425153_56428235_56428406_56428548_56428653_56428882_56429101_56430104_56430282_56430880_56430969_56431470_56431605_56432368_56432525_56433025_56433128_56433380_56433444_56433537_56433653_56433772_56433927_56434073_56434232_56449309
H1_mix_00022446	chr12	-	1284	1	FSM	ENSG00000276272.1	ENST00000610448.1	1247	1	119	-156	119	156	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCACAAAGAATTTCAAACA	NA	False	NA	NA	False	NA	NA	NA	56413071	56411787	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56411800_56413100
H1_mix_00022447	chr12	-	2599	4	FSM	ENSG00000135517.9	ENST00000652304.1	2614	4	0	15	0	-15	multi-exon	TRUE	canonical	0	0	junction_3	0.471404520791032	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCCTGCACTCGCTTCCC	-2	True	NA	NA	False	CATAAA	-3	NA	56454657	56449516	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56451466_56453071_56453153_56453590_56453756_56454253
H1_mix_00022448	chr12	-	6891	30	NNC	ENSG00000076108.12	novel	8600	29	NA	NA	1279	736	intron_retention	FALSE	canonical	3	13	junction_29	55.2781960055376	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGTGTGTGTGTGTGT	-8	True	NA	NA	False	NA	NA	NA	56635039	56597622	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_56598784_56598867_56599012_56599128_56599356_56599701_56599849_56599963_56600097_56600200_56600491_56600680_56600833_56600942_56601099_56601179_56601403_56601545_56602193_56602712_56602858_56603358_56603419_56603519_56603701_56604216_56604292_56604584_56604800_56605072_56605328_56605829_56606064_56606246_56606313_56606632_56606734_56609735_56609947_56610113_56610216_56610408_56610518_56611572_56611634_56611772_56612247_56613014_56613234_56613952_56614139_56615013_56615608_56617394_56617533_56630775_56630866_56634944
H1_mix_00022449	chr12	-	2247	8	NNC	ENSG00000110958.16	novel	2939	8	NA	NA	55	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_7	1054.24891534694	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGCATTTTGGCAGTTT	407	False	NA	-7	True	AATAAA	-32	NA	56687942	56663340	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_56664499_56664775_56664801_56666203_56666267_56670274_56670365_56671748_56671848_56672739_56672810_56672951_56673066_56687314
H1_mix_00022450	chr12	-	841	9	FSM	ENSG00000196531.14	ENST00000550920.6	844	9	0	3	0	2	multi-exon	FALSE	canonical	3	10	junction_7	4221.00213219562	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTCGGTGACTGGTCTC	15	True	NA	-7	True	AATAAA	-24	NA	56725286	56712430	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714688_56719536_56719597_56724451_56724524_56725262
H1_mix_00022451	chr12	-	709	7	FSM	ENSG00000196531.14	ENST00000678376.1	712	7	0	3	0	2	multi-exon	FALSE	canonical	2	3	junction_6	3756.94106140739	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTCGGTGACTGGTCTC	15	True	NA	-7	True	AATAAA	-24	NA	56725286	56712430	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714688_56725262
H1_mix_00022453	chr12	-	2185	8	FSM	ENSG00000166888.12	ENST00000555222.5	2185	8	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	10.7018976001875	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTGTGAACGTGTATGT	9359	False	NA	-72	True	NA	NA	NA	57102447	57095903	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57096762_57096849_57096979_57097067_57097134_57098504_57098598_57098791_57099441_57099766_57099904_57099995_57100091_57102289
H1_mix_00022454	chr12	-	3169	24	NIC	ENSG00000166888.12	novel	4018	23	NA	NA	-2	31	combination_of_known_junctions	FALSE	canonical	1	1	junction_10	37.6250529896819	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTGCACCTGCAGCGCG	19	True	NA	NA	False	NA	NA	NA	57111348	57096309	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_57096762_57096849_57096979_57097067_57097134_57098504_57098598_57098791_57098903_57099014_57099079_57099293_57099441_57099766_57099904_57099995_57100091_57100845_57100900_57102289_57102497_57102828_57102922_57104463_57104587_57104725_57104814_57105150_57105340_57105467_57105600_57106190_57106340_57106527_57106581_57106692_57106832_57107230_57107315_57107604_57107744_57108162_57108300_57110042_57110111_57111128
H1_mix_00022456	chr12	-	504	1	FSM	ENSG00000276727.1	ENST00000617433.1	701	1	15	182	15	-182	mono-exon	FALSE	NA	NA	NA	NA	NA	171	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGCTGAGGCGCCAAAGCTA	6939	False	NA	NA	False	NA	NA	NA	57230183	57229679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57229700_57230200
H1_mix_00022457	chr12	-	574	3	FSM	ENSG00000123329.20	ENST00000547216.1	587	3	13	0	13	0	multi-exon	FALSE	canonical	1	2	junction_2	6	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTGACCCTCCAGCCTT	2065	False	NA	NA	False	NA	NA	NA	57477803	57476933	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57476964_57477155_57477681_57477784
H1_mix_00022458	chr12	-	1892	13	FSM	ENSG00000175203.17	ENST00000678505.1	1869	13	0	-23	0	0	multi-exon	FALSE	canonical	0	0	junction_6	176.2989096834	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGGGTCTTGTCTTTACA	0	True	NA	NA	False	ATTAAA	-5	NA	57547177	57530050	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57530776_57532014_57532107_57532212_57532316_57532571_57532644_57532732_57532811_57532983_57533023_57533952_57534098_57534291_57534453_57535055_57535155_57535483_57535546_57535748_57535846_57546027_57546097_57547027
H1_mix_00022459	chr12	-	4464	18	FSM	ENSG00000135439.12	ENST00000328568.9	4464	18	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_16	1.16167162694891	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGTGAGCTGCTGGTCTG	4367	False	NA	-3	True	ATTAAA	-20	NA	57737836	57725196	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57726795_57726973_57727230_57727359_57727583_57727680_57727772_57727936_57728086_57729638_57729768_57730494_57730615_57730790_57730954_57731365_57731471_57731555_57731643_57731808_57731968_57732402_57732513_57732844_57732980_57734025_57734174_57734318_57734405_57734591_57734680_57735368_57735428_57737078
H1_mix_00022463	chr12	-	1225	1	FSM	ENSG00000206749.1	ENST00000384022.1	107	1	-1132	14	-1132	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CGTTTGATATTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57807392	57806167	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57806200_57807400
H1_mix_00022464	chr12	-	495	4	FSM	ENSG00000257698.3	ENST00000667438.1	495	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	44.0782133132559	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACCTTGGGTTTTACCTG	-29	True	NA	-5	True	AATAAA	-14	NA	57936175	57931527	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_57931738_57935469_57935554_57935838_57935915_57936050
H1_mix_00022465	chr12	-	6895	11	NNC	ENSG00000111110.12	novel	6454	10	NA	NA	-359	55690	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	54.9040071397343	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGATGCTTTGTTGTCAT	NA	False	NA	NA	False	AATGAA	-41	NA	62935509	62588303	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_62588387_62643994_62648637_62667177_62667330_62689698_62689807_62693935_62694000_62720170_62720290_62737501_62737587_62788225_62788339_62801815_62802161_62832113_62832280_62934491
H1_mix_00022466	chr12	-	1970	1	FSM	ENSG00000221949.6	ENST00000408887.3	1940	1	-99	69	-99	-69	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTAATTTTGGACAACAG	-29	True	NA	NA	False	NA	NA	NA	62603789	62601819	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_62601800_62603800
H1_mix_00022467	chr12	-	829	1	FSM	ENSG00000256293.2	ENST00000545001.2	620	1	2	-211	2	211	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAGTTCATCTAAAAGTAA	NA	False	NA	NA	False	NA	NA	NA	64338795	64337966	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_64338000_64338800
H1_mix_00022468	chr12	-	1262	1	FSM	ENSG00000241749.4	ENST00000622976.1	1023	1	-240	1	-240	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGGGTCTCCATGCGTTC	NA	False	NA	NA	False	AAAAAG	-9	NA	65827237	65825975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_65826000_65827200
H1_mix_00022469	chr12	-	7905	3	FSM	ENSG00000139233.7	ENST00000446587.2	1177	3	20	-6748	20	-4	multi-exon	FALSE	canonical	1	26	junction_2	302	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATCTTGTGATCTGCATA	7470	False	NA	-17	True	AATAAA	-13	NA	66130682	66116558	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_66124019_66128895_66129114_66130455
H1_mix_00022472	chr12	-	5164	8	FSM	ENSG00000135678.12	ENST00000338356.7	6636	8	44	1428	44	-1428	multi-exon	FALSE	canonical	0	0	junction_7	2.16653584115759	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACTCCAGCCGGGGTGAC	346	False	NA	NA	False	NA	NA	NA	68932840	68852607	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_68856680_68858922_68859072_68866895_68867049_68869324_68869496_68870214_68870400_68871783_68871957_68885791_68885890_68932677
H1_mix_00022485	chr12	-	4501	5	ISM	ENSG00000058272.19	ENST00000550903.5	959	11	6758	-2346	-13	0	intron_retention	FALSE	canonical	3	436	junction_2	4.71036092035419	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGAACTAGTTTTTTTA	6892	False	NA	-4	True	CATAAA	-18	NA	79790496	79773567	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_79776016_79778549_79778601_79781814_79781863_79786373_79786479_79788647
H1_mix_00022500	chr12	-	2984	8	ISM	ENSG00000173588.16	ENST00000339839.9	3130	16	79	60118	0	0	5prime_fragment	FALSE	canonical	3	67	junction_7	14.7399221884801	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTCTGAGTTTTAGCCT	12	True	NA	-9	True	AATAAA	-15	NA	94459867	94368397	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr12_-_94370037_94375885_94376018_94378790_94379043_94400849_94400982_94403169_94403263_94411696_94411848_94412317_94412592_94459556
H1_mix_00022503	chr12	-	1558	11	FSM	ENSG00000120798.17	ENST00000622476.4	1561	11	3	0	3	0	multi-exon	FALSE	canonical	1	1	junction_1	48.7800164001612	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCATGGTTAAACTCTGCA	-13	True	NA	NA	False	AAGAAA	-43	NA	95073625	95028457	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_95028510_95040475_95040598_95049067_95049234_95051761_95051944_95057552_95057644_95057730_95057879_95058309_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
H1_mix_00022504	chr12	-	9109	20	NIC	ENSG00000180263.14	novel	9291	21	NA	NA	4	-2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_13	31.0227331532728	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTTGGTGTGATTTT	48	True	NA	NA	False	AATAAA	-13	NA	95217375	95076750	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_95081557_95084497_95084647_95085779_95085909_95089568_95089697_95091706_95091810_95092698_95092846_95094591_95094695_95105006_95105087_95106953_95107038_95107562_95107632_95108347_95108420_95108502_95108562_95113650_95113702_95137521_95137679_95141387_95141540_95152810_95152842_95152925_95152994_95172599_95172745_95208842_95211268_95217224
H1_mix_00022506	chr12	-	4055	6	NIC	ENSG00000136014.12	novel	4008	6	NA	NA	21	0	combination_of_known_junctions	FALSE	canonical	3	239	junction_5	321.637311268453	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGTCTACTCTTTTCTA	2705	False	NA	-8	True	ATTAAA	-21	NA	95548777	95516559	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_95518354_95520996_95521203_95524679_95524789_95528806_95529003_95532828_95534327_95548525
H1_mix_00022507	chr12	-	749	3	FSM	ENSG00000074527.13	ENST00000547980.1	749	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	53	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCAGGAGCAGCTGAAGA	1418	False	NA	NA	False	NA	NA	NA	95789948	95738088	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_95738145_95786938_95787469_95789785
H1_mix_00022536	chr12	-	969	3	NIC	ENSG00000189046.11	novel	1180	4	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	15	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTCTTTTCTCTTTCCC	16	True	NA	-3	True	AATAAA	-16	NA	109093461	109088189	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_109088513_109092506_109092938_109093246
H1_mix_00022559	chr12	-	1060	3	NIC	ENSG00000111412.6	novel	1371	4	NA	NA	44	-114	combination_of_known_splicesites	FALSE	canonical	3	19	junction_2	146.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTAGCCATATCCTGACG	23	True	NA	65	True	NA	NA	NA	116738025	116717183	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_116717894_116719762_116719877_116737789
H1_mix_00022565	chr12	-	1948	8	NIC	ENSG00000176834.14	novel	5009	9	NA	NA	0	-3009	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	22.5098617843607	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGAGAGCTACATTGAAGA	733	False	NA	NA	False	NA	NA	NA	118103904	118066601	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_118066695_118068376_118068598_118073698_118073993_118079345_118079607_118082126_118082430_118095532_118095815_118102988_118103171_118103592
H1_mix_00022574	chr12	-	6076	13	NNC	ENSG00000089094.20	novel	3170	14	NA	NA	3175	2919	intron_retention	FALSE	non_canonical	2	22	junction_1	102.957785308133	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATAAATCTGAATTTTTG	-31	True	NA	NA	False	ATTAAA	-18	NA	121467378	121426176	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_121426809_121427341_121430470_121439856_121440076_121440815_121440978_121441069_121441234_121442156_121442837_121442991_121443031_121443679_121443794_121444011_121444273_121444449_121444537_121445274_121445419_121453119_121453345_121467157
H1_mix_00022577	chr12	-	3503	13	NIC	ENSG00000089094.20	novel	3170	14	NA	NA	3184	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	98.9085927623188	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTAATTTCTGATTCAT	-22	True	NA	-27	True	AGTAAA	-20	NA	121467369	121429095	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_121430164_121430341_121430470_121439856_121440076_121440815_121440978_121441069_121441234_121442156_121442837_121442991_121443031_121443679_121443794_121444011_121444273_121444449_121444537_121445274_121445419_121453119_121453345_121467157
H1_mix_00022578	chr12	-	4996	22	NIC	ENSG00000089094.20	novel	5315	23	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_17	89.6863772180781	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTAATTTCTGATTCAT	11	True	NA	-27	True	AGTAAA	-20	NA	121579644	121429095	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_121430470_121439856_121440076_121440815_121440978_121441069_121441234_121442156_121442837_121442991_121443031_121444011_121444273_121444449_121444537_121445274_121445419_121453119_121453345_121494578_121494666_121509566_121510040_121513275_121513403_121520984_121521101_121532805_121532960_121534496_121534591_121548876_121548984_121549459_121549639_121574546_121574594_121575780_121575860_121578801_121578947_121579611
H1_mix_00022579	chr12	-	1593	10	NIC	ENSG00000089094.20	novel	892	7	NA	NA	10	-41	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	109.282960392271	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCATCAGCATTTGTTT	5	True	NA	-13	True	AATAAA	-22	NA	121580215	121516387	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_121516864_121520984_121521101_121532805_121532960_121534496_121534591_121548876_121548984_121549459_121549639_121574546_121574594_121575780_121575860_121578801_121578947_121580019
H1_mix_00022588	chr12	-	4031	23	NIC	ENSG00000051825.15	novel	6369	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_21	22.217231418447	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAGACTAGTACATGCTG	-17	True	NA	-11	True	AATAAA	-19	NA	123233141	123156398	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_123156909_123160780_123160850_123161135_123161384_123162114_123162219_123163013_123163135_123163949_123164091_123165301_123165478_123166654_123166790_123176687_123176790_123179925_123179991_123181162_123181211_123194385_123194602_123198246_123198335_123202163_123202320_123202623_123203085_123203249_123203376_123210055_123210163_123214743_123214835_123218375_123218500_123221371_123221896_123223037_123223128_123230260_123230523_123233074
H1_mix_00022589	chr12	-	4123	24	NIC	ENSG00000051825.15	novel	6369	24	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	18	junction_22	21.6999647190744	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATAGACTAGTACATGCT	0	True	NA	-12	True	AATAAA	-18	NA	123233124	123156399	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_123156909_123160780_123160850_123161135_123161384_123162114_123162219_123163013_123163135_123163949_123164091_123165301_123165478_123166654_123166790_123176687_123176790_123179925_123179991_123181162_123181211_123194385_123194602_123198246_123198335_123202163_123202320_123202623_123203085_123203249_123203376_123210055_123210163_123214743_123214835_123218375_123218500_123221371_123221896_123223037_123223128_123227462_123227573_123230260_123230523_123233074
H1_mix_00022590	chr12	-	1144	4	FSM	ENSG00000111328.7	ENST00000618072.4	1144	4	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_3	1194.35347457201	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTGCTGTTTTATTTTTTT	-2	True	NA	-1	True	ATTAAA	-22	NA	123268254	123260970	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr12_-_123261804_123265195_123265323_123267184_123267283_123268168
H1_mix_00022595	chr12	-	2059	6	NIC	ENSG00000119242.9	novel	860	6	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	56.212454136072	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAACCTGCCTTCCTTCTG	2	True	NA	-20	True	NA	NA	NA	123972732	123936418	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_123937831_123942743_123942786_123943346_123943494_123944271_123944365_123956283_123956445_123972528
H1_mix_00022599	chr12	-	8900	47	NNC	ENSG00000196498.13	novel	8475	47	NA	NA	0	9	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_40	109.423037924988	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTCTCTACCTCAGAC	7	True	NA	-3	True	ATTAAA	-27	NA	124567589	124324405	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_124325584_124326190_124326371_124327408_124327634_124330844_124330899_124332318_124332468_124333129_124333280_124334423_124334618_124335134_124335281_124335482_124335633_124336752_124337181_124340005_124340205_124340293_124340444_124340601_124340752_124341822_124342075_124343004_124343227_124344596_124344952_124346563_124346851_124347824_124347912_124348173_124348315_124350586_124350738_124354092_124354197_124354477_124354583_124354836_124354940_124355431_124355572_124356641_124356807_124362125_124362295_124363678_124363800_124372021_124372611_124378236_124378385_124385744_124385888_124398118_124398182_124400500_124400674_124402403_124402562_124419956_124420056_124422500_124422556_124426621_124426801_124429612_124429707_124430614_124430788_124437929_124437997_124449814_124449868_124466172_124466287_124472951_124473132_124483595_124483774_124486440_124486569_124495146_124495369_124535564_124535612_124567307
H1_mix_00022600	chr12	-	8900	47	NNC	ENSG00000196498.13	novel	8475	47	NA	NA	0	9	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_40	109.011896473636	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTCTCTACCTCAGAC	7	True	NA	-3	True	ATTAAA	-27	NA	124567589	124324405	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr12_-_124325584_124326190_124326371_124327408_124327634_124330844_124330899_124332318_124332468_124333129_124333280_124334423_124334618_124335134_124335281_124335482_124335633_124336752_124337181_124340005_124340205_124340293_124340444_124340601_124340752_124341822_124342075_124343004_124343227_124344596_124344952_124346563_124346851_124347824_124347912_124348173_124348315_124350586_124350738_124354092_124354197_124354477_124354583_124354836_124354940_124355431_124355572_124356641_124356804_124362125_124362298_124363678_124363800_124372021_124372611_124378236_124378385_124385744_124385888_124398118_124398182_124400500_124400674_124402403_124402562_124419956_124420056_124422500_124422556_124426621_124426801_124429612_124429707_124430614_124430788_124437929_124437997_124449814_124449868_124466172_124466287_124472951_124473132_124483595_124483774_124486440_124486569_124495146_124495369_124535564_124535612_124567307
H1_mix_00022601	chr12	-	8976	48	NIC	ENSG00000196498.13	novel	8475	47	NA	NA	-19	9	combination_of_known_junctions	FALSE	canonical	3	88	junction_37	103.943075621561	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTCTCTACCTCAGAC	-12	True	NA	-3	True	ATTAAA	-27	NA	124567608	124324405	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_124325584_124326190_124326371_124327408_124327634_124330844_124330899_124332318_124332468_124333129_124333280_124334423_124334618_124335134_124335281_124335482_124335633_124336752_124337181_124340005_124340205_124340293_124340444_124340601_124340752_124341822_124342075_124343004_124343227_124344596_124344952_124346563_124346851_124347824_124347912_124348173_124348315_124350586_124350738_124354092_124354197_124354477_124354583_124354836_124354940_124355431_124355572_124356641_124356807_124362125_124362298_124363678_124363800_124372021_124372611_124378236_124378385_124385744_124385888_124398118_124398182_124400500_124400674_124402403_124402562_124419956_124420056_124422500_124422556_124426621_124426801_124429612_124429704_124430614_124430788_124437929_124437997_124449814_124449868_124457105_124457163_124466172_124466287_124472951_124473132_124483595_124483774_124486440_124486569_124495146_124495369_124535564_124535612_124567307
H1_mix_00022619	chr12	-	3299	17	NIC	ENSG00000072609.18	novel	11228	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	172	junction_13	65.3978210646196	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAAAGTCCTCTCTTTTG	78	False	NA	-67	True	NA	NA	NA	132887522	132840404	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr12_-_132841597_132843010_132843084_132844026_132844135_132847042_132847131_132848084_132848156_132848640_132848725_132851617_132851735_132853430_132853574_132856467_132856631_132857404_132857560_132859067_132859228_132861466_132861635_132869618_132869799_132870723_132870784_132872284_132872395_132877554_132877655_132887195
H1_mix_00022622	chr12	+	870	1	Intergenic	novelGene_268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGAATCTCCTTAGGCA	895	False	NA	NA	False	AATAAA	-21	NA	4021998	4022868	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_4022000_4022900
H1_mix_00022623	chr12	+	295	1	Intergenic	novelGene_296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	311	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGACTTTTGACACC	NA	False	NA	NA	False	NA	NA	NA	21680171	21680466	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_21680200_21680500
H1_mix_00022624	chr12	+	1717	1	Intergenic	novelGene_311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACCCTGTCTCAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59319257	59320974	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_59319300_59321000
H1_mix_00022625	chr12	+	235	1	Intergenic	novelGene_313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACCTTGCGACCCCCACT	NA	False	NA	NA	False	AAAAAG	-12	NA	66497777	66498012	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr12_+_66497800_66498000
H1_mix_00022634	chr13	+	848	1	FSM	ENSG00000279730.2	ENST00000623146.2	1180	1	170	162	170	-162	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAACGTGGGAACTGCCA	NA	False	NA	NA	False	NA	NA	NA	18297723	18298571	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_18297700_18298600
H1_mix_00022636	chr13	+	380	1	FSM	ENSG00000228797.2	ENST00000447172.1	505	1	129	-4	129	4	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCAGGGCAGCAGGCATG	NA	False	NA	NA	False	NA	NA	NA	18697131	18697511	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_18697100_18697500
H1_mix_00022637	chr13	+	4250	14	FSM	ENSG00000196199.14	ENST00000361479.10	4239	14	-11	0	-11	0	multi-exon	FALSE	canonical	3	76	junction_4	18.4493549541672	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGTTTCCTTTTATATC	-24	True	NA	13	True	AATAAA	-14	NA	19633647	19673441	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_19633962_19642114_19642271_19646442_19647292_19648421_19648522_19650002_19650261_19658994_19659121_19659200_19659290_19661697_19661839_19663039_19663127_19666424_19666580_19668376_19668532_19670235_19670364_19671205_19671290_19671833
H1_mix_00022638	chr13	+	367	3	FSM	ENSG00000196199.14	ENST00000467481.1	367	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	45	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	19658994	19661090	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_19659121_19659200_19659290_19660938
H1_mix_00022639	chr13	+	1209	1	FSM	ENSG00000275964.1	ENST00000620617.1	1191	1	-18	0	-18	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATTGAGCCCCGTTTTAC	-5	True	NA	23	True	AATACA	-22	NA	19863839	19865048	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_19863800_19865000
H1_mix_00022640	chr13	+	334	1	FSM	ENSG00000289235.1	ENST00000690637.1	777	1	17	426	17	-426	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCAACCGGTGGGAGCC	13	True	NA	NA	False	NA	NA	NA	19957448	19957782	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_19957400_19957800
H1_mix_00022641	chr13	+	7448	25	FSM	ENSG00000121741.17	ENST00000610343.5	7429	25	-19	0	0	0	multi-exon	FALSE	canonical	2	270	junction_10	73.199771838594	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTGGATTTCCCCCTT	23	False	NA	NA	False	AATAAA	-16	NA	19958707	20089115	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_19958842_19959957_19960027_19993062_19993920_20002849_20003136_20005073_20005240_20006373_20006587_20019546_20019619_20026611_20026763_20027202_20027319_20031318_20031436_20034253_20034405_20036736_20036910_20051432_20051599_20052276_20052312_20058574_20058705_20059446_20059563_20061052_20061225_20062845_20062972_20064450_20064546_20066850_20067020_20067238_20067391_20082015_20082131_20082780_20083033_20083655_20083777_20085821
H1_mix_00022642	chr13	+	4898	28	NIC	ENSG00000121741.17	novel	5051	26	NA	NA	2	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	137.451675009666	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATGTATATATATGTAT	-2	True	NA	7	True	AATAAA	-11	NA	19958728	20086738	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_19958842_19959957_19960027_19965219_19965282_19970024_19970072_19993062_19993565_19993825_19993920_20002849_20003136_20005073_20005240_20006373_20006587_20019546_20019619_20026611_20026763_20027202_20027319_20031318_20031436_20034253_20034405_20036736_20036910_20051432_20051599_20052276_20052312_20058574_20058705_20059446_20059563_20061052_20061225_20062845_20062972_20064450_20064546_20066850_20067020_20067238_20067391_20082015_20082131_20082780_20083033_20083655_20083777_20085821
H1_mix_00022643	chr13	+	7420	26	FSM	ENSG00000121741.17	ENST00000382871.3	5051	26	0	-2369	0	0	multi-exon	FALSE	canonical	2	88	junction_2	108.496222975733	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTGGATTTCCCCCTT	14	False	NA	NA	False	AATAAA	-16	NA	19958782	20089115	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_19958842_19959957_19960027_19970024_19970072_19993062_19993920_20002849_20003136_20005073_20005240_20006373_20006587_20019546_20019619_20026611_20026763_20027202_20027319_20031318_20031436_20034253_20034405_20036736_20036910_20051432_20051599_20052276_20052312_20058574_20058705_20059446_20059563_20061052_20061225_20062845_20062972_20064450_20064546_20066850_20067020_20067238_20067391_20082015_20082131_20082780_20083033_20083655_20083777_20085821
H1_mix_00022644	chr13	+	7159	27	NIC	ENSG00000121741.17	novel	5051	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	88	junction_2	112.342256272423	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTGGATTTCCCCCTT	14	False	NA	NA	False	AATAAA	-16	NA	19958782	20089115	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_19958842_19959957_19960027_19970024_19970072_19993062_19993565_19993825_19993920_20002849_20003136_20005073_20005240_20006373_20006587_20019546_20019619_20026611_20026763_20027202_20027319_20031318_20031436_20034253_20034405_20036736_20036910_20051432_20051599_20052276_20052312_20058574_20058705_20059446_20059563_20061052_20061225_20062845_20062972_20064450_20064546_20066850_20067020_20067238_20067391_20082015_20082131_20082780_20083033_20083655_20083777_20085821
H1_mix_00022645	chr13	+	7112	26	NIC	ENSG00000121741.17	novel	5051	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	186	junction_3	82.4977672425139	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTGGATTTCCCCCTT	14	False	NA	NA	False	AATAAA	-16	NA	19958782	20089115	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_19958842_19959957_19960027_19993062_19993565_19993825_19993920_20002849_20003136_20005073_20005240_20006373_20006587_20019546_20019619_20026611_20026763_20027202_20027319_20031318_20031436_20034253_20034405_20036736_20036910_20051432_20051599_20052276_20052312_20058574_20058705_20059446_20059563_20061052_20061225_20062845_20062972_20064450_20064546_20066850_20067020_20067238_20067391_20082015_20082131_20082780_20083033_20083655_20083777_20085821
H1_mix_00022646	chr13	+	4789	26	NNC	ENSG00000121741.17	novel	3456	19	NA	NA	64	-8	at_least_one_novel_splicesite	FALSE	canonical	2	36	junction_1	106.529725429103	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATGTATATATATGTAT	78	False	NA	7	True	AATAAA	-11	NA	19958846	20086738	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_19958960_19959957_19960027_19993062_19993565_19993825_19993920_20002849_20003136_20005073_20005240_20006373_20006587_20019546_20019619_20026611_20026763_20027202_20027319_20031318_20031436_20034253_20034405_20036736_20036910_20051432_20051599_20052276_20052312_20058574_20058705_20059446_20059563_20061052_20061225_20062845_20062972_20064450_20064546_20066850_20067020_20067238_20067391_20082015_20082131_20082780_20083033_20083655_20083777_20085821
H1_mix_00022647	chr13	+	5024	25	NNC	ENSG00000121741.17	novel	3456	19	NA	NA	90	-8	intron_retention	FALSE	canonical	2	36	junction_1	101.365597591096	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATGTATATATATGTAT	10	False	NA	7	True	AATAAA	-11	NA	19958872	20086738	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_19958960_19959957_19960027_19993062_19993920_20002849_20003136_20005073_20005240_20006373_20006587_20019546_20019619_20026611_20026763_20027202_20027319_20031318_20031436_20034253_20034405_20036736_20036910_20051432_20051599_20052276_20052312_20058574_20058705_20059446_20059563_20061052_20061225_20062845_20062972_20064450_20064546_20066850_20067020_20067238_20067391_20082015_20082131_20082780_20083033_20083655_20083777_20085821
H1_mix_00022648	chr13	+	5060	25	NNC	ENSG00000121741.17	novel	3456	19	NA	NA	230	-8	intron_retention	FALSE	canonical	2	32	junction_1	101.937063576285	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATGTATATATATGTAT	12	False	NA	7	True	AATAAA	-11	NA	19959012	20086738	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_19959136_19959957_19960027_19993062_19993920_20002849_20003136_20005073_20005240_20006373_20006587_20019546_20019619_20026611_20026763_20027202_20027319_20031318_20031436_20034253_20034405_20036736_20036910_20051432_20051599_20052276_20052312_20058574_20058705_20059446_20059563_20061052_20061225_20062845_20062972_20064450_20064546_20066850_20067020_20067238_20067391_20082015_20082131_20082780_20083033_20083655_20083777_20085821
H1_mix_00022649	chr13	+	826	1	FSM	ENSG00000279951.1	ENST00000623873.1	1513	1	-13	700	-13	-700	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGCATTTTGGGAGGCC	NA	False	NA	NA	False	NA	NA	NA	20092618	20093444	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_20092600_20093400
H1_mix_00022650	chr13	+	2802	26	FSM	ENSG00000032742.18	ENST00000351808.10	2850	26	-21	69	-2	-62	multi-exon	FALSE	canonical	2	30	junction_14	12.9122577421611	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACTTCCTTAGCTTTTT	-35	True	NA	25	True	AATAAA	-27	NA	20567135	20691375	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_20567257_20574379_20574476_20582956_20583020_20589810_20589868_20590966_20591021_20591617_20591682_20592334_20592405_20596149_20596241_20597014_20597120_20598650_20598754_20599450_20599566_20601704_20601934_20605034_20605106_20615792_20615880_20625749_20625850_20631015_20631103_20638331_20638519_20641289_20641399_20643454_20643606_20644842_20644959_20653875_20653929_20656364_20656431_20663497_20663605_20670972_20671040_20690704_20690816_20691053
H1_mix_00022652	chr13	+	2647	27	NIC	ENSG00000032742.18	novel	3091	28	NA	NA	12	-73	combination_of_known_junctions	FALSE	canonical	2	28	junction_12	13.6443086949583	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTAGGCCAGTGACTTC	7	True	NA	14	True	AATAAA	-16	NA	20567177	20691364	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_20567257_20574379_20574476_20582956_20583020_20589810_20589868_20590966_20591021_20591617_20591682_20592334_20592405_20596149_20596241_20597014_20597120_20598650_20598754_20599450_20599566_20601704_20601749_20601850_20601934_20605034_20605106_20615792_20615880_20625749_20625850_20631015_20631103_20638331_20638519_20641289_20641399_20643454_20643606_20644842_20644959_20653875_20653929_20656364_20656431_20663497_20663605_20670972_20671040_20690704_20690816_20691053
H1_mix_00022653	chr13	+	2446	1	FSM	ENSG00000238286.1	ENST00000419313.1	864	1	-1516	-66	-1516	66	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCCCACAGCAGTTTCAG	9582	False	NA	NA	False	NA	NA	NA	20605751	20608197	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_20605800_20608200
H1_mix_00022654	chr13	+	1005	1	FSM	ENSG00000213621.3	ENST00000454001.1	886	1	-38	-81	-38	81	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAACAAAGCAAATGAAAG	NA	False	NA	NA	False	AATAAA	-24	NA	20961271	20962276	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_20961300_20962300
H1_mix_00022655	chr13	+	2320	4	FSM	ENSG00000150459.12	ENST00000621421.4	2300	4	-20	0	-20	0	multi-exon	FALSE	canonical	3	2924	junction_2	115.467167050494	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGCTCAGTGCTTTAGT	356	False	NA	11	True	AATAAA	-21	NA	21140493	21149084	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_21140682_21140885_21140996_21146804_21146928_21147185
H1_mix_00022656	chr13	+	408	3	FSM	ENSG00000150459.12	ENST00000492245.5	405	3	-3	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1556	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTATTGCCATTAAGCCT	26	False	NA	71	True	AATAAA	-20	NA	21140611	21147413	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_21140682_21140885_21140996_21147185
H1_mix_00022657	chr13	+	2233	2	FSM	ENSG00000173141.5	ENST00000309594.5	2233	2	0	0	0	0	multi-exon	FALSE	canonical	3	1550	junction_1	0	196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTGTTTCTAAATACAT	-15	True	NA	6	True	AATAAA	-13	NA	21176657	21179084	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_21176718_21176911
H1_mix_00022658	chr13	+	2082	3	NNC	ENSG00000233325.4	novel	444	4	NA	NA	51	26058	intron_retention	FALSE	canonical	3	8	junction_2	10	468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGCTCTTTTTTCTGG	-6	True	NA	11	True	ATTAAA	-16	NA	21298189	21332431	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_21298363_21301418_21301619_21330722
H1_mix_00022659	chr13	+	708	1	NIC	ENSG00000233325.4	novel	1310	3	NA	NA	5978	-574	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATTCTAGGATTTTTTTC	6012	False	NA	NA	False	NA	NA	NA	21304236	21304944	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_21304200_21304900
H1_mix_00022660	chr13	+	411	1	NIC	ENSG00000276476.4	novel	1145	4	NA	NA	0	-233557	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTTTCCTGTTTCACTG	2	True	NA	NA	False	NA	NA	NA	22040974	22041385	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_22041000_22041400
H1_mix_00022662	chr13	+	1624	9	FSM	ENSG00000127863.16	ENST00000382258.8	1625	9	1	0	1	0	multi-exon	FALSE	canonical	3	21	junction_8	3.278719262151	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACACAGCTAATATATAAGA	-21	True	NA	NA	False	AATAAA	-25	NA	23579360	23669273	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_23579530_23590149_23590253_23593344_23593456_23615866_23616046_23626706_23626793_23659049_23659215_23660364_23660491_23667979_23668083_23668691
H1_mix_00022663	chr13	+	4170	10	FSM	ENSG00000127863.16	ENST00000382263.3	4151	10	-19	0	1	0	multi-exon	FALSE	canonical	3	21	junction_8	3.12694383988229	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTGTTCAGTGAGAGA	-21	True	NA	9	True	AATAAA	-21	NA	23579360	23676093	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_23579530_23590149_23590253_23593344_23593456_23615866_23616046_23626706_23626793_23659049_23659215_23660364_23660491_23667979_23668083_23668691_23669098_23673371
H1_mix_00022664	chr13	+	3738	9	NIC	ENSG00000127863.16	novel	4151	10	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	2	12	junction_8	5.65547301293181	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTGTTCAGTGAGAGA	5	True	NA	9	True	AATAAA	-21	NA	23579386	23676093	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_23579530_23590149_23590253_23593344_23593456_23615866_23616046_23626706_23626793_23659049_23659215_23660364_23660491_23667979_23668083_23673371
H1_mix_00022665	chr13	+	849	4	FSM	ENSG00000205861.13	ENST00000382133.9	852	4	3	0	3	0	multi-exon	FALSE	canonical	1	3	junction_1	4.32049379893857	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTTGTGAACAACTTTGG	NA	False	NA	8	True	AATAAA	-20	NA	23888844	23892104	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_23889012_23889999_23890043_23891384_23891532_23891612
H1_mix_00022666	chr13	+	8475	13	FSM	ENSG00000182957.16	ENST00000382108.8	8454	13	-21	0	-21	0	multi-exon	FALSE	canonical	3	23	junction_2	9.12376323429952	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTTCTGATGATGCATTT	NA	False	NA	7	True	ATTAAA	-15	NA	24160698	24307069	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_24160933_24222818_24224583_24249476_24249843_24251717_24251863_24284134_24284272_24286213_24286394_24286764_24286951_24288998_24289179_24290651_24290885_24294738_24294869_24297362_24297736_24300400_24300476_24302597
H1_mix_00022667	chr13	+	6662	12	FSM	ENSG00000182957.16	ENST00000382095.8	6665	12	0	3	0	0	multi-exon	FALSE	canonical	2	9	junction_1	13.1104651908565	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTTCTGATGATGCATTT	-13	True	NA	7	True	ATTAAA	-15	NA	24160747	24307069	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_24160933_24249476_24249843_24251717_24251863_24284134_24284272_24286213_24286394_24286764_24286951_24288998_24289179_24290651_24290885_24294738_24294869_24297362_24297736_24300400_24300476_24302597
H1_mix_00022668	chr13	+	1275	4	FSM	ENSG00000205822.10	ENST00000440905.5	1275	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	1.63299316185545	204	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCAGTGTTTTTCTTCTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	24586003	24597676	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_24586795_24587225_24587327_24594270_24594364_24597386
H1_mix_00022669	chr13	+	4417	23	FSM	ENSG00000075673.12	ENST00000381946.5	4406	23	-11	0	-11	0	multi-exon	FALSE	canonical	1	4	junction_10	4.79001199122017	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTAATTGTGGTGTTCTA	NA	False	NA	10	True	TATAAA	-5	NA	24680396	24712472	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_24680753_24681561_24681721_24685313_24685374_24688318_24688523_24689261_24689376_24690337_24690473_24690603_24690722_24690981_24691251_24692428_24692628_24692786_24692897_24694443_24694579_24698657_24698851_24700746_24700923_24701934_24702072_24706312_24706464_24707022_24707192_24707278_24707434_24709363_24709488_24709682_24709829_24710459_24710594_24710791_24710894_24711317_24711410_24711493
H1_mix_00022670	chr13	+	2166	1	FSM	ENSG00000289006.1	ENST00000688886.1	2090	1	266	-342	266	342	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAATCATCAATTTTACT	220	False	NA	NA	False	AATAAA	-24	NA	25096405	25098571	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_25096400_25098600
H1_mix_00022671	chr13	+	4350	15	FSM	ENSG00000139496.16	ENST00000381718.7	2489	15	-88	-1773	-11	70	multi-exon	FALSE	canonical	2	5	junction_2	47.5076792933178	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTCCCTTCATTGGTTT	0	True	NA	102	True	NA	NA	NA	25301544	25342491	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_25301881_25307805_25307949_25312882_25313033_25313613_25313752_25315356_25315468_25319325_25319351_25320529_25320596_25320918_25321094_25324988_25325069_25326915_25327035_25327429_25327513_25331356_25331559_25336935_25337035_25338635_25338732_25339964
H1_mix_00022672	chr13	+	4236	16	FSM	ENSG00000139496.16	ENST00000381736.8	4236	16	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	22.9720603245672	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGGTGTCAGTAGCTGTT	-6	True	NA	32	True	AATAAA	-29	NA	25301624	25342421	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_25301881_25307805_25307949_25309246_25309283_25312882_25313033_25313613_25313752_25315356_25315468_25319325_25319351_25320529_25320596_25320918_25321094_25324988_25325069_25326915_25327035_25327429_25327513_25331356_25331559_25336935_25337035_25338635_25338732_25339964
H1_mix_00022673	chr13	+	564	3	FSM	ENSG00000139496.16	ENST00000476553.1	564	3	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_2	0.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTCCTGCTGAGTAAGT	1029	False	NA	NA	False	NA	NA	NA	25320272	25325054	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_25320596_25320918_25321094_25324988
H1_mix_00022674	chr13	+	5307	2	FSM	ENSG00000132932.19	ENST00000683868.1	7867	2	2560	0	2560	0	multi-exon	FALSE	canonical	3	17	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACACCAACAACAACAAAAAA	2038	False	NA	NA	False	NA	NA	NA	26012530	26025102	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_26012623_26019887
H1_mix_00022675	chr13	+	684	1	FSM	ENSG00000277368.1	ENST00000621997.1	464	1	-222	2	-222	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCTGTCTATCTCTATT	10	True	NA	2	True	AATAAA	-13	NA	26221968	26222652	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_26222000_26222700
H1_mix_00022676	chr13	+	3184	13	NIC	ENSG00000132964.12	novel	3065	13	NA	NA	-157	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_11	24.6356787336308	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTGAACATTGTTAAAAA	NA	False	NA	-54	True	AATAAA	-4	NA	26253946	26405178	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_26254770_26337566_26337643_26349071_26349183_26353739_26353881_26382813_26382872_26385210_26385343_26393366_26393511_26396284_26396355_26397152_26397226_26400452_26400551_26401268_26401348_26401468_26401625_26403955
H1_mix_00022677	chr13	+	3065	13	FSM	ENSG00000132964.12	ENST00000381527.8	3065	13	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_11	12.953978367882	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGAGTCAGCTGTCTTTT	11	True	NA	6	True	AATAAA	-22	NA	26254128	26405238	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_26254770_26337566_26337643_26349071_26349183_26353739_26353881_26382813_26382872_26385210_26385343_26393366_26393511_26396284_26396355_26397152_26397226_26400452_26400551_26401268_26401348_26401465_26401625_26403955
H1_mix_00022680	chr13	+	4873	10	FSM	ENSG00000132970.14	ENST00000335327.6	4857	10	-16	0	-16	0	multi-exon	FALSE	canonical	3	139	junction_6	27.3405591171707	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTTGTATGTTTGGCTT	-39	True	NA	29	True	AATAAA	-40	NA	26557666	26688948	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_26557820_26612960_26613059_26642260_26642404_26665027_26665163_26667516_26667671_26671871_26671990_26676548_26676725_26681053_26681321_26682606_26682975_26685687
H1_mix_00022681	chr13	+	566	6	FSM	ENSG00000122026.11	ENST00000311549.11	566	6	0	0	0	0	multi-exon	FALSE	canonical	3	12328	junction_1	2750.17683795061	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTCTTCATTGAGTAG	2	True	NA	6	True	AATAAA	-21	NA	27251557	27256568	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_27251586_27253764_27253844_27254219_27254282_27255241_27255355_27256183_27256335_27256435
H1_mix_00022682	chr13	+	637	6	FSM	ENSG00000122026.11	ENST00000272274.8	616	6	-21	0	0	0	multi-exon	FALSE	canonical	3	297	junction_1	7519.19576550578	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTCTTCATTGAGTAG	2	True	NA	6	True	AATAAA	-21	NA	27251557	27256568	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_27251657_27253764_27253844_27254219_27254282_27255241_27255355_27256183_27256335_27256435
H1_mix_00022683	chr13	+	806	6	FSM	ENSG00000122026.11	ENST00000319826.8	806	6	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	7595.34836594083	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTCTTCATTGAGTAG	-4	True	NA	6	True	AATAAA	-21	NA	27251582	27256568	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_27251851_27253764_27253844_27254219_27254282_27255241_27255355_27256183_27256335_27256435
H1_mix_00022684	chr13	+	641	6	FSM	ENSG00000122026.11	ENST00000326092.8	641	6	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	7577.80491699278	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTCTTCATTGAGTAG	10	True	NA	6	True	AATAAA	-21	NA	27251596	27256568	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_27251700_27253764_27253844_27254219_27254282_27255241_27255355_27256183_27256335_27256435
H1_mix_00022685	chr13	+	438	4	FSM	ENSG00000122026.11	ENST00000493317.1	438	4	0	0	0	0	multi-exon	FALSE	canonical	3	18208	junction_1	783.63937284102	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTACCTGGGTTCAACTAAA	1977	False	NA	49	True	AAAAAG	-19	NA	27253704	27256307	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_27253844_27254219_27254282_27255241_27255355_27256183
H1_mix_00022686	chr13	+	515	5	ISM	ENSG00000122026.11	ENST00000326092.8	641	6	2168	23	0	0	3prime_fragment	FALSE	canonical	3	18208	junction_1	679.407646409724	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGACCTCTGGGCTACAA	14	False	NA	-17	True	NA	NA	NA	27253764	27256545	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr13_+_27253844_27254219_27254282_27255241_27255355_27256183_27256335_27256435
H1_mix_00022687	chr13	+	2542	4	FSM	ENSG00000122035.7	ENST00000241463.5	2542	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.816496580927726	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCACATTCTCCTTGTT	4	True	NA	NA	False	AATAAA	-31	NA	27270829	27275192	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_27271069_27271483_27271541_27271638_27271719_27273026
H1_mix_00022688	chr13	+	1443	9	FSM	ENSG00000122034.17	ENST00000381140.10	1443	9	0	0	0	0	multi-exon	FALSE	canonical	3	870	junction_7	96.3518941173447	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTGTGGCCTAGATGAG	-18	True	NA	4	True	ATTAAA	-17	NA	27424618	27435823	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_27424939_27427091_27427193_27429869_27429967_27430532_27430622_27432730_27432805_27434138_27434220_27434804_27435035_27435132_27435193_27435432
H1_mix_00022690	chr13	+	1191	8	FSM	ENSG00000122034.17	ENST00000419181.5	1191	8	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_4	301.750471314919	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGATTCCTTATCATTT	25	True	NA	14	True	ATTAAA	-16	NA	27424661	27435688	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_27424939_27427091_27427193_27429869_27429967_27430532_27430622_27434138_27434220_27434804_27435035_27435132_27435193_27435432
H1_mix_00022692	chr13	+	629	2	FSM	ENSG00000186184.20	ENST00000626929.1	624	2	-5	0	-5	0	multi-exon	FALSE	canonical	3	14	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCCGCGCCCCTTCGCCA	-40	True	NA	NA	False	NA	NA	NA	27620736	27621597	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_27621105_27621336
H1_mix_00022693	chr13	+	3089	3	FSM	ENSG00000186184.20	ENST00000399697.7	2036	3	-1058	5	-21	0	multi-exon	FALSE	canonical	3	299	junction_2	11.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGTATGCATTCTGTA	NA	False	NA	18	True	AATAAA	-14	NA	27620720	27667410	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_27622010_27648378_27648454_27665685
H1_mix_00022694	chr13	+	1606	3	FSM	ENSG00000186184.20	ENST00000621089.2	1606	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	145	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCCCTTTCTACATGCT	-7	True	NA	NA	False	NA	NA	NA	27620946	27667022	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_27621141_27648378_27648454_27665685
H1_mix_00022695	chr13	+	2667	4	NIC	ENSG00000186184.20	novel	2118	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	123.629374431088	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGTATGCATTCTGTA	-7	True	NA	18	True	AATAAA	-14	NA	27620946	27667410	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_27621141_27621336_27622010_27648378_27648454_27665685
H1_mix_00022696	chr13	+	715	2	FSM	ENSG00000186184.20	ENST00000302979.5	693	2	-22	0	0	0	multi-exon	FALSE	canonical	3	487	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTTTGACTGGTTTCTGT	-13	True	NA	30	True	AATAAA	-19	NA	27621869	27623449	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_27622010_27622874
H1_mix_00022697	chr13	+	1723	3	FSM	ENSG00000186184.20	ENST00000489647.4	1723	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	154.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGTCAACCTGTATCTA	-13	True	NA	NA	False	AATGAA	-10	NA	27621869	27651549	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_27622010_27648378_27648454_27650041
H1_mix_00022698	chr13	+	391	1	FSM	ENSG00000180389.7	ENST00000381026.4	156	1	-60	-175	-60	175	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTGGAAAGTGCAAGGCAA	NA	False	NA	NA	False	AATAAA	-39	NA	27945199	27945590	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_27945200_27945600
H1_mix_00022699	chr13	+	5764	18	FSM	ENSG00000152520.14	ENST00000399613.1	4940	18	-824	0	-297	0	multi-exon	FALSE	canonical	3	14	junction_4	7.13536928334397	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCCTTTTCTTGCACGT	8	True	NA	12	True	AATAAA	-17	NA	28138208	28295335	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_28139088_28174271_28174394_28176492_28176560_28177864_28177936_28220230_28220379_28256291_28256540_28260446_28260552_28261400_28261459_28266714_28266877_28267094_28267212_28267299_28267402_28270700_28270867_28271980_28272072_28277236_28277377_28280411_28280542_28281314_28281380_28287983_28288123_28292381
H1_mix_00022701	chr13	+	5924	19	FSM	ENSG00000152520.14	ENST00000380958.8	5590	19	-334	0	-295	0	multi-exon	FALSE	canonical	3	12	junction_4	7.44962506306505	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCCTTTTCTTGCACGT	10	True	NA	12	True	AATAAA	-17	NA	28138210	28295335	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_28139088_28174271_28174394_28176492_28176560_28177864_28177936_28197184_28197347_28220230_28220379_28256291_28256540_28260446_28260552_28261400_28261459_28266714_28266877_28267094_28267212_28267299_28267402_28270700_28270867_28271980_28272072_28277236_28277377_28280411_28280542_28281314_28281380_28287983_28288123_28292381
H1_mix_00022702	chr13	+	2017	1	FSM	ENSG00000279393.1	ENST00000623899.1	1635	1	-324	-58	-324	58	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTAGAGTCAGCAATTT	203	False	NA	NA	False	NA	NA	NA	28495308	28497325	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_28495300_28497300
H1_mix_00022703	chr13	+	258	1	FSM	ENSG00000235472.1	ENST00000421800.1	1220	1	965	-3	965	3	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCCTGCTTCCTAGCCC	978	False	NA	NA	False	NA	NA	NA	28599797	28600055	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_28599800_28600100
H1_mix_00022704	chr13	+	1338	6	FSM	ENSG00000132963.8	ENST00000380842.5	1338	6	0	0	0	0	multi-exon	FALSE	canonical	3	7301	junction_1	650.754823262955	436	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGCAATGTCTAGAGACT	-9	True	NA	NA	False	GATAAA	-17	NA	28659129	28678959	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_28659188_28662409_28662508_28664508_28664570_28668472_28668575_28672338_28672433_28678034
H1_mix_00022705	chr13	+	580	2	Intergenic	novelGene_342	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	26	junction_1	0	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAAAATCTTCTCTGGTT	NA	False	NA	1	True	AATAAA	-20	NA	29647545	29655470	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_29647725_29655069
H1_mix_00022707	chr13	+	4778	8	NIC	ENSG00000132952.12	novel	4894	9	NA	NA	6	53	combination_of_known_junctions	FALSE	canonical	3	56	junction_1	31.6156768140137	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCCAAGACATTTACTTC	8	True	NA	NA	False	NA	NA	NA	30617925	30660823	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_30618057_30621763_30621893_30630834_30631475_30637743_30637858_30642627_30642758_30646931_30647058_30653147_30653306_30657473
H1_mix_00022708	chr13	+	4914	9	FSM	ENSG00000132952.12	ENST00000255304.9	4894	9	-20	0	-20	0	multi-exon	FALSE	canonical	3	88	junction_2	24.2535435555302	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACCTGTTTTTGTGATGA	12	False	NA	NA	False	AATAAA	-28	NA	30617899	30660766	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_30618057_30621072_30621240_30621763_30621893_30630834_30631475_30637743_30637858_30642627_30642758_30646931_30647058_30653147_30653306_30657473
H1_mix_00022709	chr13	+	646	4	NNC	ENSG00000236094.3	novel	641	3	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	67.3762239633207	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCAATACATTTGCGTA	NA	False	NA	NA	False	AATAAA	-18	NA	30863387	30883395	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_30863579_30881951_30882005_30882559_30882660_30883093
H1_mix_00022710	chr13	+	557	3	FSM	ENSG00000236094.3	ENST00000690833.1	641	3	55	29	55	0	multi-exon	FALSE	canonical	3	64	junction_1	50	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCAATACATTTGCGTA	10	False	NA	NA	False	AATAAA	-18	NA	30863423	30883395	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_30863579_30882559_30882660_30883093
H1_mix_00022711	chr13	+	624	4	NNC	ENSG00000236094.3	novel	641	3	NA	NA	-43	-1	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	61.6008657947814	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCCAATACATTTGCGT	12	False	NA	NA	False	AATAAA	-17	NA	30863448	30883394	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_30863579_30875273_30875367_30882559_30882660_30883093
H1_mix_00022712	chr13	+	1862	5	Fusion	ENSG00000102802.10_ENSG00000236094.3	novel	641	3	NA	NA	-4	0	multi-exon	FALSE	canonical	0	0	junction_1	8.13941029804985	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCTTTCCATTGTGGT	-7	True	NA	7	True	ATTAAA	-19	NA	30863487	30925572	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr13_+_30863579_30917402_30917513_30921013_30921127_30921560_30921847_30924310
H1_mix_00022713	chr13	+	4231	15	FSM	ENSG00000187676.8	ENST00000343307.5	4215	15	-16	0	-16	0	multi-exon	FALSE	canonical	3	58	junction_5	9.98366011980351	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGAACACTTTCTTACAAA	NA	False	NA	NA	False	AATAAA	-22	NA	31199958	31332276	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_31200155_31215050_31215101_31222951_31222992_31229184_31229295_31247022_31247100_31247854_31247967_31260945_31261083_31269213_31269278_31274508_31274629_31276701_31276772_31284647_31284762_31286719_31286820_31317565_31317686_31323750_31323896_31329500
H1_mix_00022714	chr13	+	3289	26	ISM	ENSG00000073910.23	ENST00000642040.1	10697	62	514	111474	40	67666	5prime_fragment	FALSE	canonical	2	6	junction_1	4.25882612934597	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGTTCCAGGTACGGTG	65	False	NA	NA	False	NA	NA	NA	32031813	32185136	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr13_+_32031866_32078833_32079034_32101962_32102017_32117333_32117474_32124285_32124377_32124601_32124682_32124794_32124876_32131671_32131841_32134903_32134997_32135084_32135184_32136870_32136973_32147281_32147386_32147838_32147948_32149747_32149835_32155490_32155663_32157272_32157406_32161143_32161252_32171011_32171271_32173366_32173550_32175545_32175633_32178176_32178437_32178843_32179034_32179674_32179800_32182976_32183035_32184599_32184692_32184975
H1_mix_00022715	chr13	+	8805	36	NIC	ENSG00000073910.23	novel	12973	61	NA	NA	-67844	-4	combination_of_known_junctions	FALSE	canonical	1	1	junction_35	7.11216262067011	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATATCCAAGGAAAAGAGC	NA	False	NA	NA	False	AATGAA	-14	NA	32186303	32298708	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_32186421_32187545_32187657_32194142_32194298_32201940_32202041_32202355_32202528_32208852_32209110_32209584_32209732_32210865_32211035_32212291_32212383_32218748_32218832_32224234_32224386_32224932_32225037_32225788_32225975_32228455_32228655_32231178_32231301_32234573_32234762_32236077_32236173_32237378_32237987_32239251_32239350_32239710_32239882_32244041_32244183_32247322_32247503_32249525_32249688_32251877_32251953_32254223_32254395_32261615_32261817_32262313_32262476_32265449_32265617_32267169_32267360_32274841_32274992_32276463_32276563_32278464_32278549_32289632_32289744_32294367_32294571_32295201_32298333_32298454
H1_mix_00022716	chr13	+	11873	27	FSM	ENSG00000139618.17	ENST00000544455.6	11854	27	-19	0	-19	0	multi-exon	FALSE	canonical	2	3	junction_1	12.094793246213	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTCCTTCCATAACTC	NA	False	NA	23	True	AATAAA	-17	NA	32315066	32400268	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_32315146_32316421_32316528_32319076_32319326_32325075_32325185_32326100_32326151_32326241_32326283_32326498_32326614_32329442_32329493_32330918_32331031_32332271_32333388_32336264_32341197_32344557_32344654_32346826_32346897_32354860_32355289_32356427_32356610_32357741_32357930_32362522_32362694_32363178_32363534_32370401_32370558_32370955_32371101_32376669_32376792_32379316_32379516_32379749_32379914_32380006_32380146_32394688_32394934_32396897_32397045_32398161
H1_mix_00022717	chr13	+	11959	27	FSM	ENSG00000139618.17	ENST00000380152.8	11954	27	-5	0	-2	0	multi-exon	FALSE	canonical	3	16	junction_10	10.8930383283852	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTCCTTCCATAACTC	10	True	NA	23	True	AATAAA	-17	NA	32315502	32400268	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_32315668_32316421_32316528_32319076_32319326_32325075_32325185_32326100_32326151_32326241_32326283_32326498_32326614_32329442_32329493_32330918_32331031_32332271_32333388_32336264_32341197_32344557_32344654_32346826_32346897_32354860_32355289_32356427_32356610_32357741_32357930_32362522_32362694_32363178_32363534_32370401_32370558_32370955_32371101_32376669_32376792_32379316_32379516_32379749_32379914_32380006_32380146_32394688_32394934_32396897_32397045_32398161
H1_mix_00022719	chr13	+	7353	35	NIC	ENSG00000083642.19	novel	7472	35	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	2	74	junction_31	38.6348803445637	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTATTATTTTGTG	10	True	NA	NA	False	AATAAA	-13	NA	32586564	32778019	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_32586594_32648753_32648881_32651803_32652008_32658238_32658326_32658433_32658532_32659153_32659281_32667763_32667845_32673215_32673357_32675843_32675960_32678834_32678930_32683877_32684024_32687133_32687286_32688455_32688570_32694222_32694305_32696853_32696903_32699729_32699870_32701322_32701439_32706933_32707040_32709945_32710107_32732100_32732225_32735171_32735331_32741079_32741149_32742590_32742728_32745976_32746101_32753331_32753537_32755841_32755957_32758086_32758220_32758533_32758654_32759627_32759691_32760574_32760721_32764488_32764589_32770120_32770561_32770653_32770762_32773188_32773325_32775016
H1_mix_00022720	chr13	+	7472	35	FSM	ENSG00000083642.19	ENST00000315596.15	7472	35	0	0	0	0	multi-exon	TRUE	canonical	2	160	junction_31	30.7740959688333	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTATTATTTTGTG	-10	True	NA	NA	False	AATAAA	-13	NA	32586451	32778019	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_32586594_32648753_32648881_32651803_32652008_32658238_32658326_32658433_32658532_32659153_32659281_32667763_32667845_32673215_32673357_32675843_32675960_32678834_32678930_32683877_32684024_32687133_32687286_32688455_32688570_32694222_32694305_32696853_32696903_32699729_32699870_32701322_32701439_32706933_32707040_32709945_32710107_32732100_32732225_32735171_32735331_32741079_32741149_32742590_32742728_32745976_32746101_32753331_32753537_32755841_32755957_32758086_32758220_32758533_32758654_32759627_32759691_32760574_32760721_32764488_32764595_32770120_32770561_32770653_32770762_32773188_32773325_32775016
H1_mix_00022724	chr13	+	1461	9	FSM	ENSG00000133119.13	ENST00000434425.5	1461	9	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_8	159.485060036983	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGTCTGCTATTTTCT	-5	True	NA	28	True	AATAAA	-27	NA	33818068	33966558	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_33818266_33821131_33821270_33823916_33823985_33825788_33825887_33829835_33830018_33830718_33830856_33831255_33831355_33835147_33835218_33966086
H1_mix_00022725	chr13	+	2306	9	FSM	ENSG00000133119.13	ENST00000380071.8	2306	9	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_8	46.1410879802373	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTAAGTCTTTTTGTGGA	-5	True	NA	21	True	AATAAA	-18	NA	33818148	33837500	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_33818266_33821131_33821270_33823916_33823985_33825788_33825887_33829835_33830018_33830718_33830856_33831255_33831355_33835147_33835218_33836103
H1_mix_00022726	chr13	+	6408	1	FSM	ENSG00000276672.1	ENST00000621575.1	4636	1	-1771	-1	-1771	1	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTCATGAGTCACAACTT	NA	False	NA	4	True	AATAAA	-16	NA	33844418	33850826	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_33844400_33850800
H1_mix_00022727	chr13	+	220	1	FSM	ENSG00000280431.1	ENST00000624765.1	724	1	225	279	225	-279	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTACTTCTCACTTGATA	NA	False	NA	NA	False	NA	NA	NA	34079635	34079855	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_34079600_34079900
H1_mix_00022728	chr13	+	11257	58	NIC	ENSG00000172915.20	novel	11200	59	NA	NA	-67	-1	combination_of_known_junctions	TRUE	canonical	3	9	junction_24	10.1901889459459	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGACTGTTTCAGATTTCA	NA	False	NA	10	True	AATAAA	-16	NA	34942202	35672735	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_34943115_35040932_35041165_35044946_35045048_35045305_35045402_35048562_35048685_35050268_35050396_35056009_35056130_35058716_35058864_35069907_35070106_35070718_35070853_35098296_35098406_35109289_35109443_35110809_35110979_35117413_35117494_35118227_35118291_35118376_35118475_35123481_35123575_35142268_35142378_35155773_35155856_35156082_35156207_35157077_35157271_35159015_35160033_35161749_35161968_35164355_35164510_35171271_35171453_35173463_35173595_35176995_35177104_35182359_35182529_35183975_35184072_35195863_35196303_35208699_35208855_35211052_35211180_35232491_35232620_35290388_35290451_35309527_35309593_35349107_35349217_35352156_35352324_35432268_35432394_35452091_35452236_35472399_35472537_35550476_35550595_35550929_35551033_35554986_35555103_35566904_35567018_35583897_35584039_35593327_35593448_35606425_35606579_35628080_35628249_35645868_35645932_35646258_35646349_35649654_35649848_35651804_35651877_35654854_35655011_35655578_35655750_35665084_35665187_35667373_35667571_35668367_35668520_35670900
H1_mix_00022729	chr13	+	10832	58	NIC	ENSG00000172915.20	novel	11200	59	NA	NA	337	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_31	10.6965474822205	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACCGACTGTTTCAGATT	300	False	NA	7	True	AATAAA	-13	NA	34942606	35672732	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_34943115_35040932_35041165_35044946_35045048_35045305_35045402_35048562_35048685_35050268_35050396_35056009_35056130_35058716_35058864_35069907_35070106_35070718_35070853_35098296_35098406_35109289_35109443_35110809_35110979_35117413_35117494_35118227_35118291_35118376_35118475_35123481_35123575_35142268_35142378_35155773_35155856_35156082_35156207_35157077_35157271_35159015_35160033_35161749_35161968_35164355_35164510_35171271_35171453_35173463_35173595_35176995_35177104_35182359_35182529_35183975_35184072_35195863_35196303_35208699_35208837_35211052_35211180_35232491_35232620_35290388_35290451_35309527_35309593_35349107_35349217_35352156_35352324_35432268_35432394_35452091_35452236_35472399_35472537_35550476_35550595_35550929_35551033_35554986_35555103_35566904_35567018_35583897_35584039_35593327_35593448_35606425_35606579_35628080_35628249_35645868_35645932_35646258_35646349_35649654_35649848_35651804_35651877_35654854_35655011_35655578_35655750_35665084_35665187_35667373_35667571_35668367_35668520_35670900
H1_mix_00022732	chr13	+	1745	9	FSM	ENSG00000133101.10	ENST00000255465.7	1730	9	-15	0	-15	0	multi-exon	FALSE	canonical	3	15	junction_1	7.75302360373035	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTGTTAGATTTATTTA	162	False	NA	3	True	AATAAA	-16	NA	36432479	36442870	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_36432730_36433032_36433222_36437628_36437876_36438066_36438192_36438643_36438868_36439978_36440184_36441117_36441232_36442170_36442305_36442613
H1_mix_00022733	chr13	+	1699	9	FSM	ENSG00000133101.10	ENST00000625767.1	1699	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	7.06664701255129	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTGTTAGATTTATTTA	28	False	NA	3	True	AATAAA	-16	NA	36432522	36442870	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_36432730_36433035_36433222_36437628_36437876_36438066_36438192_36438643_36438868_36439978_36440184_36441117_36441232_36442170_36442305_36442613
H1_mix_00022734	chr13	+	3099	2	FSM	ENSG00000180440.4	ENST00000315190.4	3099	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTCTTTGATTCTTT	-16	True	NA	11	True	AATAAA	-20	NA	36674019	36697839	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_36674185_36694905
H1_mix_00022735	chr13	+	2306	3	FSM	ENSG00000133111.4	ENST00000255476.3	2306	3	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	15.5	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGCTGATTTCTTTATTC	-29	True	NA	15	True	ATTAAA	-21	NA	36819221	36829104	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_36819958_36825427_36825536_36827642
H1_mix_00022736	chr13	+	2427	10	FSM	ENSG00000120699.14	ENST00000490537.6	2423	10	-4	0	0	0	multi-exon	FALSE	canonical	1	60	junction_4	627.245477376194	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTCTATTATTTCTTA	-5	True	NA	43	True	AATAAA	-24	NA	37000782	37009401	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_37000823_37002272_37002310_37002487_37002552_37002933_37004562_37005956_37006026_37006114_37006161_37006974_37007072_37008056_37008178_37008728_37008836_37009183
H1_mix_00022737	chr13	+	1169	11	FSM	ENSG00000120699.14	ENST00000389704.4	1166	11	-3	0	0	0	multi-exon	FALSE	canonical	1	567	junction_10	396.674186203237	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGATTCAGTGCTCT	-5	True	NA	19	True	ATTAAA	-24	NA	37000782	37009614	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_37000823_37002272_37002310_37002487_37002552_37002933_37003008_37004515_37004562_37005919_37006026_37006114_37006161_37006974_37007072_37008056_37008178_37008728_37008836_37009183
H1_mix_00022739	chr13	+	3273	6	FSM	ENSG00000120686.12	ENST00000239878.9	3168	6	-46	-59	-44	59	multi-exon	FALSE	canonical	3	674	junction_5	56.1519367430902	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTGGTGATTTCTGCCA	261	False	NA	NA	False	TATAAA	-18	NA	38349804	38363678	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_38349922_38349998_38350056_38354238_38354297_38358092_38358133_38359300_38359334_38360710
H1_mix_00022741	chr13	+	711	4	FSM	ENSG00000150893.11	ENST00000482551.1	711	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	14.3527000944073	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCTTGAACTTGAAATT	NA	False	NA	NA	False	NA	NA	NA	38821695	38850235	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_38821849_38846572_38846723_38848460_38848671_38850037
H1_mix_00022742	chr13	+	3205	2	FSM	ENSG00000188811.14	ENST00000473371.1	3237	2	32	0	27	0	multi-exon	FALSE	canonical	3	137	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTTAGCATTCTGAGTT	12	True	NA	NA	False	ATTAAA	-22	NA	39038337	39041817	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_39039289_39039563
H1_mix_00022744	chr13	+	3271	7	FSM	ENSG00000188811.14	ENST00000470258.5	3298	7	27	0	27	0	multi-exon	FALSE	canonical	2	3	junction_1	39.9391898877392	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCTATAACTTTTTATT	12	True	NA	30	True	ATTAAA	-23	NA	39038337	39050109	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_39038466_39039135_39039289_39039563_39039712_39042104_39042306_39044089_39044182_39047039_39047153_39047673
H1_mix_00022745	chr13	+	3275	6	FSM	ENSG00000188811.14	ENST00000379599.6	3275	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	39.9529723550076	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCTATAACTTTTTATT	-15	True	NA	30	True	ATTAAA	-23	NA	39038390	39050109	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_39038724_39039135_39039289_39039563_39039712_39044089_39044182_39047039_39047153_39047673
H1_mix_00022746	chr13	+	1999	5	ISM	ENSG00000188811.14	ENST00000379600.8	3411	7	-44	4835	21	810	5prime_fragment	FALSE	canonical	3	74	junction_3	23.3813494050279	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATTATCCTCCTGAGCTT	6	True	NA	-2	True	ATTAAA	-7	NA	39038411	39045274	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr13_+_39038724_39039135_39039289_39039563_39039712_39042104_39042306_39044089
H1_mix_00022749	chr13	+	3821	7	FSM	ENSG00000102743.15	ENST00000338625.9	3821	7	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_6	20.387904911164	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTCTGATGAATTTCA	0	True	NA	15	True	ATTAAA	-15	NA	40789610	40812460	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_40789664_40793157_40793282_40799056_40799316_40805117_40805256_40807293_40807464_40808437_40808597_40809542
H1_mix_00022751	chr13	+	2388	10	FSM	ENSG00000120688.9	ENST00000379487.5	2388	10	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_8	26.1023626006025	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAATATTGTTATTCTAA	-25	True	NA	NA	False	ATTAAA	-19	NA	41061508	41084006	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_41061676_41062643_41062717_41065015_41065079_41065163_41065288_41068560_41068738_41071526_41071574_41072781_41072858_41076043_41076238_41080645_41080810_41082703
H1_mix_00022753	chr13	+	1787	11	FSM	ENSG00000172766.19	ENST00000403412.7	1751	11	-40	4	-27	-4	multi-exon	FALSE	canonical	3	118	junction_2	8.88594395660922	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGATTTCTTTTTTGTCTGT	-26	True	NA	0	True	AATAAA	-18	NA	41311239	41358714	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_41311583_41316845_41316931_41318805_41318911_41320666_41320825_41323055_41323191_41325697_41325852_41328723_41328844_41331273_41331370_41336649_41336757_41355143_41355217_41358303
H1_mix_00022759	chr13	+	675	1	FSM	ENSG00000234213.1	ENST00000442741.1	703	1	4	24	4	-24	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAATAAACGTGTATATA	NA	False	NA	NA	False	AGTAAA	-8	NA	42255876	42256551	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_42255900_42256600
H1_mix_00022764	chr13	+	7458	6	FSM	ENSG00000120675.6	ENST00000379221.4	7459	6	0	1	0	-1	multi-exon	FALSE	canonical	3	507	junction_1	86.1059812092052	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACACTCAATTTTTCTG	-23	True	NA	NA	False	AATAAA	-21	NA	43023585	43114212	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_43023735_43065685_43065738_43068929_43069004_43078611_43078689_43085767_43085839_43107177
H1_mix_00022765	chr13	+	4028	7	FSM	ENSG00000179630.11	ENST00000325686.7	4028	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	6.26276474268531	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGATTATCTCTGCCAA	-2	True	NA	7	True	AATAAA	-20	NA	43879903	43893932	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_43880120_43880951_43881548_43882184_43882364_43883770_43883937_43888756_43888983_43890113_43890275_43891448
H1_mix_00022768	chr13	+	2269	4	FSM	ENSG00000227258.7	ENST00000659169.1	2277	4	8	0	5	0	multi-exon	FALSE	canonical	0	0	junction_3	4.10960933531265	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAATTAAAGAAATTGAGAA	17	True	NA	NA	False	AATATA	-42	NA	44142347	44240492	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_44142697_44143556_44143738_44146781_44146856_44238827
H1_mix_00022769	chr13	+	825	3	FSM	ENSG00000151778.11	ENST00000379179.8	802	3	-23	0	-23	0	multi-exon	FALSE	canonical	3	12	junction_2	1	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCATGTGTGGGTTACAGT	109	False	NA	13	True	AATAAA	-19	NA	44373800	44397714	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_44374110_44379640_44379714_44397271
H1_mix_00022773	chr13	+	891	1	FSM	ENSG00000133114.18	ENST00000611650.1	899	1	11	-3	2	3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCATGCCTTTCTTTTTG	-15	True	NA	10	True	AATAAA	-24	NA	44989539	44990430	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_44989500_44990400
H1_mix_00022774	chr13	+	3440	8	FSM	ENSG00000133114.18	ENST00000379151.9	3442	8	2	0	2	0	multi-exon	FALSE	canonical	3	93	junction_2	5.44733598998218	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCTTGCAGATTAATC	-15	True	NA	26	True	AATAAA	-19	NA	44989539	45030305	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_44989743_45004304_45004438_45006201_45006304_45008794_45008880_45014951_45015084_45015431_45015597_45020329_45020429_45027784
H1_mix_00022775	chr13	+	5488	9	ISM	ENSG00000133114.18	ENST00000497558.5	4294	10	-66	0	-10	0	intron_retention	FALSE	canonical	3	46	junction_8	19.0718214914045	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGAGAAGTTGTAGTATT	-1	True	NA	9	True	AATAAA	-12	NA	44989553	45033602	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr13_+_44989743_45004304_45004438_45006201_45006304_45008794_45008880_45014951_45015084_45015431_45015597_45020329_45020429_45027784_45028004_45029238
H1_mix_00022776	chr13	+	1517	9	NIC	ENSG00000133114.18	novel	4294	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_8	31.6889176211495	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTAGTATTTATTTTTGT	-18	True	NA	18	True	AATAAA	-21	NA	44989536	45033611	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_44989743_45004304_45004438_45006201_45006304_45008794_45008880_45014951_45015084_45015431_45015597_45020329_45020429_45027784_45028004_45033235
H1_mix_00022777	chr13	+	4299	10	FSM	ENSG00000133114.18	ENST00000497558.5	4294	10	-5	0	0	0	multi-exon	FALSE	canonical	2	12	junction_9	31.5844937732676	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGAGAAGTTGTAGTATT	20	False	NA	9	True	AATAAA	-12	NA	44989614	45033602	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_44989743_45004304_45004438_45006201_45006304_45008794_45008880_45014951_45015084_45015431_45015597_45020329_45020429_45027784_45028004_45029238_45032108_45033235
H1_mix_00022781	chr13	+	1472	10	FSM	ENSG00000170919.16	ENST00000665079.1	1472	10	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	13.3481399268277	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTTATGTTATGTATAT	2819	False	NA	3	True	GGGGCT	-16	NA	45344418	45391427	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_45344447_45369958_45370183_45377060_45377216_45378529_45378672_45379194_45379336_45379925_45380002_45383090_45383236_45383759_45383839_45389734_45389821_45391031
H1_mix_00022782	chr13	+	3555	7	FSM	ENSG00000170919.16	ENST00000663584.1	3555	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	32.5205063511215	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCAGCCTAGGCGACAGA	NA	False	NA	NA	False	AATACA	-40	NA	45376302	45391702	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_45377216_45378529_45380002_45383090_45383236_45383759_45383839_45389734_45389821_45390713_45390903_45391031
H1_mix_00022783	chr13	+	2558	2	FSM	ENSG00000170919.16	ENST00000379050.3	2558	2	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCAGGACCCTGTCTCAA	NA	False	NA	NA	False	NA	NA	NA	45389032	45391719	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_45390903_45391031
H1_mix_00022785	chr13	+	4530	23	FSM	ENSG00000136152.15	ENST00000349995.10	4555	23	-51	76	-10	-76	multi-exon	FALSE	canonical	3	39	junction_13	10.8917475773751	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTCCTCACGTGTCTGA	3	True	NA	19	True	AATAAA	-37	NA	45464887	45536625	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_45465211_45476200_45476348_45479004_45479067_45480124_45480291_45481229_45481305_45482380_45482474_45483229_45483356_45486494_45486576_45490914_45490959_45491411_45491539_45492158_45492251_45493346_45493487_45496151_45496313_45503243_45503350_45509691_45509817_45511764_45511855_45516142_45516264_45518761_45518851_45518959_45519095_45524975_45525052_45529790_45529919_45530681_45530781_45534701
H1_mix_00022788	chr13	+	4755	19	FSM	ENSG00000136141.15	ENST00000311191.10	4710	19	-45	0	-45	0	multi-exon	FALSE	canonical	3	26	junction_18	6.98521366004958	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTTTGTGATTGACTTA	NA	False	NA	7	True	ATTAAA	-18	NA	46553122	46753040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_46553704_46650200_46650346_46669029_46669157_46681740_46681847_46685904_46686042_46687851_46687980_46689132_46689197_46692535_46692642_46694892_46695018_46699335_46699404_46701120_46701208_46705067_46705158_46705267_46705305_46711790_46711845_46712524_46712598_46723220_46723331_46728846_46728985_46733920_46733999_46750539
H1_mix_00022789	chr13	+	1938	3	FSM	ENSG00000136159.4	ENST00000258662.3	1938	3	0	0	0	0	multi-exon	FALSE	canonical	3	576	junction_2	34.5	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTTTTCATTTCTATAT	-5	True	NA	19	True	AATAAA	-16	NA	48037725	48047221	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_48037905_48040919_48041117_48045659
H1_mix_00022794	chr13	+	6286	26	FSM	ENSG00000102531.16	ENST00000492622.6	6286	26	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	21.8668699177546	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTTGATTTTGTGCAAC	5	True	NA	14	True	AATAAA	-19	NA	48975911	49209779	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_48976178_49006151_49006290_49075288_49075365_49114654_49114732_49131136_49131375_49136331_49136602_49138746_49138806_49145777_49145936_49167243_49167304_49168612_49168752_49172042_49172097_49174434_49174560_49175366_49175542_49178567_49178655_49185963_49186103_49187121_49187191_49188514_49188634_49191014_49191121_49191208_49191385_49196876_49196991_49197724_49197875_49197981_49198266_49198361_49198575_49201799_49201967_49203156_49203285_49207080
H1_mix_00022795	chr13	+	6325	26	FSM	ENSG00000102531.16	ENST00000541916.5	6328	26	3	0	3	0	multi-exon	FALSE	canonical	3	17	junction_1	29.6911030445149	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGACTTGATTTTGTGCAA	-22	True	NA	13	True	AATAAA	-18	NA	48976611	49209778	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_48976918_49006151_49006290_49075288_49075365_49114654_49114732_49131136_49131375_49136331_49136602_49138746_49138806_49145777_49145936_49167243_49167304_49168612_49168752_49172042_49172097_49174434_49174560_49175366_49175542_49178567_49178655_49185963_49186103_49187121_49187191_49188514_49188634_49191014_49191121_49191208_49191385_49196876_49196991_49197724_49197875_49197981_49198266_49198361_49198575_49201799_49201967_49203156_49203285_49207080
H1_mix_00022796	chr13	+	5899	24	FSM	ENSG00000102531.16	ENST00000398316.7	5714	24	0	-185	0	0	multi-exon	FALSE	canonical	3	31	junction_1	27.0079453407917	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGACTTGATTTTGTGCAA	-33	True	NA	13	True	AATAAA	-18	NA	49110312	49209778	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_49110407_49114654_49114732_49131136_49131375_49136331_49136602_49138746_49138806_49145777_49145936_49167243_49167304_49168612_49168752_49172042_49172097_49174434_49174560_49175366_49175542_49178567_49178655_49185963_49186103_49187121_49187191_49188514_49188634_49191014_49191121_49191208_49191385_49196876_49196991_49197724_49197875_49197981_49198266_49198361_49198575_49201799_49201967_49203156_49203285_49207080
H1_mix_00022797	chr13	+	6170	24	NNC	ENSG00000102531.16	novel	582	5	NA	NA	2836	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	31.6981271771795	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGACTTGATTTTGTGCAA	17	True	NA	13	True	AATAAA	-18	NA	49113148	49209778	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_49113514_49114654_49114732_49131136_49131375_49136331_49136602_49138746_49138806_49145777_49145936_49167243_49167304_49168612_49168752_49172042_49172097_49174434_49174560_49175366_49175542_49178567_49178655_49185963_49186103_49187121_49187191_49188514_49188634_49191014_49191121_49191208_49191385_49196876_49196991_49197724_49197875_49197981_49198266_49198361_49198575_49201799_49201967_49203156_49203285_49207080
H1_mix_00022806	chr13	+	414	5	FSM	ENSG00000136147.18	ENST00000488605.1	572	5	62	96	62	-96	multi-exon	FALSE	canonical	2	2	junction_4	19.4598946554189	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTCTCTATCAAGGCTG	NA	False	NA	NA	False	NA	NA	NA	49522017	49527258	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_49522108_49523174_49523242_49524084_49524217_49526386_49526459_49527205
H1_mix_00022809	chr13	+	2619	3	FSM	ENSG00000204977.10	ENST00000420995.6	2607	3	-12	0	-12	0	multi-exon	FALSE	canonical	3	170	junction_1	59	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAATATATA	233	False	NA	NA	False	NA	NA	NA	49997006	50014331	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_49997132_49997666_49997764_50011934
H1_mix_00022810	chr13	+	6803	4	Fusion	ENSG00000198553.9_ENSG00000204977.10	novel	1637	4	NA	NA	-8	0	multi-exon	FALSE	non_canonical	1	23	junction_3	113.889810294376	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTAGTTTGGTAATTCT	237	False	NA	16	True	AATAAA	-17	NA	49997010	50018467	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr13_+_49997217_49997666_49997764_50011934_50015086_50015118
H1_mix_00022812	chr13	+	1541	3	FSM	ENSG00000204977.10	ENST00000457662.2	1489	3	-52	0	-12	0	multi-exon	FALSE	canonical	3	80	junction_1	104	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCAAGTATGCAGTTTT	233	False	NA	9	True	TATAAA	-14	NA	49997006	50013168	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_49997217_49997666_49997764_50011934
H1_mix_00022813	chr13	+	7273	2	FSM	ENSG00000204977.10	ENST00000378182.4	7255	2	-18	0	5	0	multi-exon	FALSE	canonical	3	288	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTAGTTTGGTAATTCT	250	False	NA	16	True	AATAAA	-17	NA	49997023	50018467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_49997764_50011934
H1_mix_00022814	chr13	+	6614	3	Fusion	ENSG00000198553.9_ENSG00000204977.10	novel	1637	4	NA	NA	3934	0	multi-exon	FALSE	non_canonical	0	0	junction_2	8	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTAGTTTGGTAATTCT	3934	False	NA	16	True	AATAAA	-17	NA	50000992	50018467	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr13_+_50001109_50011934_50015086_50015120
H1_mix_00022815	chr13	+	1328	2	FSM	ENSG00000198553.9	ENST00000312942.2	1337	2	0	9	0	-7	multi-exon	FALSE	canonical	1	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCACTTATGTTTGTTTCA	0	True	NA	8	True	AATAAA	-21	NA	50015443	50020913	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_50016072_50020213
H1_mix_00022818	chr13	+	2954	3	FSM	ENSG00000176124.15	ENST00000469754.3	2957	3	3	0	1	0	multi-exon	TRUE	canonical	3	34	junction_2	2	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTTTCTATTTGAAGCA	1873	False	NA	15	True	AATAAA	-21	NA	50082171	50107218	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_50082558_50083141_50083195_50104703
H1_mix_00022819	chr13	+	1494	2	FSM	ENSG00000176124.15	ENST00000659280.2	1487	2	-7	0	-7	0	multi-exon	FALSE	canonical	3	34	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGGTTATCTTTTCTCT	17	False	NA	NA	False	AATAAA	-16	NA	50082294	50105297	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_50083195_50104703
H1_mix_00022822	chr13	+	4885	10	FSM	ENSG00000136104.21	ENST00000422660.6	4885	10	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_9	139.678555137974	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTTTGGTACTTTTCCT	-26	True	NA	NA	False	AATAAA	-16	NA	50909746	50973745	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_50910141_50927406_50927479_50929474_50929583_50930682_50930760_50934884_50935000_50943320_50943395_50945426_50945533_50947986_50948069_50949462_50949506_50969931
H1_mix_00022823	chr13	+	1524	11	FSM	ENSG00000136104.21	ENST00000336617.8	1513	11	-11	0	0	0	multi-exon	FALSE	canonical	3	377	junction_10	40.5587228595773	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGTGTATGACTGCTTT	7	True	NA	5	True	AATAAA	-17	NA	50909779	50956762	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_50910141_50927406_50927479_50929474_50929583_50930682_50930760_50934884_50935000_50943320_50943395_50945426_50945533_50947986_50948069_50949462_50949506_50953904_50953986_50956357
H1_mix_00022825	chr13	+	1257	11	FSM	ENSG00000136104.21	ENST00000611510.5	1257	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	139.903573935765	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAATTTCATGTTCTCT	105	False	NA	87	True	NA	NA	NA	50910154	50956572	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_50910439_50927406_50927479_50929474_50929583_50930682_50930760_50934884_50935000_50943320_50943395_50945426_50945533_50947986_50948069_50949462_50949506_50953904_50953986_50956357
H1_mix_00022828	chr13	+	1876	3	Intergenic	novelGene_369	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	55	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCATTCACTACTCTT	60	False	NA	10	True	TATAAA	-17	NA	51170097	51187874	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_51170248_51174939_51176044_51187252
H1_mix_00022829	chr13	+	1560	3	Intergenic	novelGene_365	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	55	junction_2	48	23	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCATTCACTACTCTT	NA	False	NA	10	True	TATAAA	-17	NA	51169535	51187874	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_51170463_51175948_51176044_51187336
H1_mix_00022830	chr13	+	1644	3	Intergenic	novelGene_366	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	110	junction_2	20.5	44	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCATTCACTACTCTT	NA	False	NA	10	True	TATAAA	-17	NA	51169535	51187874	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_51170463_51175948_51176044_51187252
H1_mix_00022834	chr13	+	4728	4	FSM	ENSG00000150510.17	ENST00000322475.13	4728	4	0	0	0	0	multi-exon	TRUE	canonical	3	260	junction_3	21.2289111041209	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGAGGTTGTCTCATAAA	-1	True	NA	18	True	AATAAA	-18	NA	51222397	51284239	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_51222570_51231347_51231380_51251467_51252202_51280449
H1_mix_00022837	chr13	+	2133	2	FSM	ENSG00000236778.8	ENST00000670302.1	4305	2	81	2091	81	19	multi-exon	FALSE	canonical	3	5	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGACTCCATTCAGCACTT	6402	False	NA	NA	False	AATAAA	-22	NA	51466905	51469442	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_51468368_51468771
H1_mix_00022838	chr13	+	2515	2	FSM	ENSG00000139668.9	ENST00000612477.1	6932	2	-118	4535	-118	-4535	multi-exon	FALSE	canonical	3	16	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGAGCCTGTTTCAGGAA	7357	False	NA	NA	False	AATAAA	-21	NA	51584336	51588051	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_51584825_51586024
H1_mix_00022839	chr13	+	9375	12	FSM	ENSG00000139668.9	ENST00000298125.7	9369	12	-6	0	1	0	multi-exon	FALSE	canonical	3	160	junction_8	28.3563510457199	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCGTCCCTTGGTTATGCT	2	True	NA	NA	False	ATTAAA	-18	NA	51584455	51767709	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_51584825_51660595_51660664_51675169_51675244_51703595_51703651_51719197_51719349_51727677_51727791_51739048_51739176_51751309_51751416_51755357_51755460_51756331_51756463_51758191_51758301_51759739
H1_mix_00022840	chr13	+	395	3	FSM	ENSG00000139668.9	ENST00000460145.2	395	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	94.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAACATTGTGCTGAAGGA	NA	False	NA	NA	False	NA	NA	NA	51739147	51753123	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_51739176_51751309_51751416_51752862
H1_mix_00022842	chr13	+	468	1	FSM	ENSG00000236044.1	ENST00000439042.1	408	1	-30	-30	-30	30	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAAGAGAATGACCAAGCT	NA	False	NA	NA	False	AATAAA	-30	NA	51966711	51967179	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_51966700_51967200
H1_mix_00022844	chr13	+	6946	5	FSM	ENSG00000253710.5	ENST00000679359.1	6504	5	-34	-408	-14	348	multi-exon	FALSE	canonical	3	18	junction_3	77.8279352160906	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCTCTGCTAACTCATT	662	False	NA	NA	False	NA	NA	NA	52012376	52033948	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_52012463_52018912_52019144_52023712_52023780_52024005_52024938_52028318
H1_mix_00022850	chr13	+	3625	9	FSM	ENSG00000136108.15	ENST00000258607.10	3614	9	-11	0	0	0	multi-exon	FALSE	canonical	3	573	junction_2	70.2316479587372	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCAGCTTTTTAATATCT	-8	True	NA	20	True	AATAAA	-18	NA	52455466	52476627	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_52455627_52456522_52456608_52460898_52460975_52461057_52461927_52462362_52462568_52465294_52465466_52468277_52468348_52473828_52474085_52474894
H1_mix_00022851	chr13	+	3629	9	FSM	ENSG00000136108.15	ENST00000378037.9	3629	9	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_2	167.201553147691	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGCTTTTTAATATCTG	-8	True	NA	21	True	AATAAA	-19	NA	52455466	52476628	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_52455627_52456522_52456608_52460895_52460975_52461057_52461927_52462362_52462568_52465294_52465466_52468277_52468348_52473828_52474085_52474894
H1_mix_00022853	chr13	+	3395	9	FSM	ENSG00000136108.15	ENST00000490903.5	3395	9	0	0	0	0	multi-exon	FALSE	canonical	2	31	junction_1	219.338458495085	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTTAATGAAGTTTATT	409	False	NA	7	True	ATTAAA	-15	NA	52455971	52476349	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_52456180_52456522_52456608_52460898_52460975_52461057_52461927_52462362_52462568_52465294_52465466_52468277_52468348_52473828_52474085_52474894
H1_mix_00022854	chr13	+	772	5	NIC	ENSG00000244471.6	novel	865	4	NA	NA	75	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_4	9.67923034130297	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCAGGTTTTTTTTCTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	52570227	52587095	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_52570467_52571231_52571294_52579343_52579436_52583095_52583189_52586809
H1_mix_00022859	chr13	+	1220	14	FSM	ENSG00000165416.15	ENST00000343788.10	1217	14	-3	0	0	0	multi-exon	FALSE	canonical	3	166	junction_5	164.078023004716	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAATGCCCATTGTGTATT	-23	True	NA	33	True	AATAAA	-33	NA	52652835	52687872	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_52652959_52653045_52653104_52657531_52657623_52658398_52658469_52659178_52659250_52661474_52661571_52662648_52662703_52663095_52663113_52664034_52664058_52665636_52665734_52666811_52666920_52676229_52676321_52679973_52680156_52687733
H1_mix_00022860	chr13	+	14161	13	FSM	ENSG00000165416.15	ENST00000310528.9	14161	13	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_5	63.7640507391639	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGAGTGGGTTAAGTGG	-23	True	NA	NA	False	AATAAA	-16	NA	52652835	52700909	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_52652959_52653045_52653104_52657531_52657623_52658398_52658469_52659178_52659250_52662648_52662703_52663095_52663113_52664034_52664058_52665636_52665734_52666811_52666920_52676229_52676321_52679973_52680156_52687733
H1_mix_00022865	chr13	+	476	2	NNC	ENSG00000278630.1	novel	659	3	NA	NA	-23182	-98262	at_least_one_novel_splicesite	FALSE	canonical	3	133	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGCACTTGCTTTATCAC	NA	False	NA	30	True	AATAAA	-41	NA	55039762	55063228	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_55039882_55062871
H1_mix_00022866	chr13	+	3307	3	NNC	ENSG00000278630.1	novel	659	3	NA	NA	-23189	-85090	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_2	21	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTGAGTTGTTTCTGCAT	NA	False	NA	5	True	AATAAA	-18	NA	55039755	55076400	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_55039882_55062871_55063003_55073350
H1_mix_00022867	chr13	+	3778	4	NNC	ENSG00000278630.1	novel	659	3	NA	NA	-23196	2949	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_3	9.80929264637478	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCTCCTGCTCTTGCTA	NA	False	NA	4	True	AATAAA	-10	NA	55039748	55164439	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_55039846_55062871_55063003_55106769_55106837_55160956
H1_mix_00022869	chr13	+	1393	4	Intergenic	novelGene_378	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	19.6129209111409	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGGCTCAGCTTCTTAC	NA	False	NA	11	True	AATAAA	-19	NA	55654966	55672519	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_55655267_55660686_55661073_55670879_55670978_55671910
H1_mix_00022870	chr13	+	3394	14	NIC	ENSG00000083544.16	novel	2645	14	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_7	5.7779421409889	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTACTGTGTGTTTTA	NA	False	NA	15	True	AATAAA	-16	NA	60396473	60573871	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_60397406_60439687_60439773_60444682_60444749_60460379_60460541_60467237_60467380_60483774_60483847_60485798_60485949_60494434_60494576_60509762_60509920_60510629_60510756_60528366_60529218_60535107_60535234_60567524_60567651_60573612
H1_mix_00022871	chr13	+	2645	14	FSM	ENSG00000083544.16	ENST00000377881.8	2645	14	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_13	7.8401183423021	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTACTGTGTGTTTTA	-7	True	NA	15	True	AATAAA	-16	NA	60397219	60573871	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_60397406_60439687_60439773_60444682_60444749_60460379_60460541_60467237_60467380_60483774_60483847_60485798_60485949_60494434_60494576_60509762_60509920_60510629_60510756_60528366_60529218_60535107_60535234_60567524_60567651_60573615
H1_mix_00022872	chr13	+	720	3	Intergenic	novelGene_393	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	26	junction_1	28.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	NA	False	NA	23	True	AATAAA	-18	NA	61088757	61094399	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_61089014_61090833_61090921_61094022
H1_mix_00022873	chr13	+	722	3	Intergenic	novelGene_394	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	83	junction_2	25	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTTTGGTGGTCTCTT	NA	False	NA	26	True	AATAAA	-21	NA	61088773	61094402	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_61089014_61090818_61090921_61094022
H1_mix_00022874	chr13	+	727	3	Intergenic	novelGene_395	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	127	junction_2	3	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTGGTGGTCTCTTCA	NA	False	NA	28	True	AATAAA	-23	NA	61088773	61094404	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_61089014_61090818_61090921_61094019
H1_mix_00022875	chr13	+	784	3	Intergenic	novelGene_396	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	63.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	27	True	AATAAA	-22	NA	61088774	61094403	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_61089014_61090759_61090921_61094019
H1_mix_00022876	chr13	+	1571	3	Intergenic	novelGene_398	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	55	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTGGTGGTCTCTTCA	NA	False	NA	28	True	AATAAA	-23	NA	61088774	61094404	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_61089014_61089973_61090921_61094019
H1_mix_00022877	chr13	+	703	3	Intergenic	novelGene_399	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	26	junction_1	50.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	NA	False	NA	21	True	AATAAA	-16	NA	61088775	61094397	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_61089014_61090833_61090921_61094019
H1_mix_00022879	chr13	+	711	3	Intergenic	novelGene_400	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	29	48	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACAAAGCCTGTTTGGTG	NA	False	NA	8	True	AATAAA	-14	NA	61205991	61211235	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_61206232_61207249_61207352_61210866
H1_mix_00022880	chr13	+	641	1	FSM	ENSG00000232380.1	ENST00000411421.1	1007	1	46	320	46	-320	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCACTGCTGGCTAGTTGG	NA	False	NA	NA	False	NA	NA	NA	68985103	68985744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_68985100_68985700
H1_mix_00022881	chr13	+	1049	1	FSM	ENSG00000236534.1	ENST00000440551.1	403	1	-104	-542	-104	542	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATAAACATCAAGTGTTTA	8	False	NA	NA	False	ATTAAA	-33	NA	71674962	71676011	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_71675000_71676000
H1_mix_00022883	chr13	+	2652	11	FSM	ENSG00000136122.18	ENST00000652266.1	2829	11	175	2	1	0	multi-exon	TRUE	canonical	3	35	junction_2	29.0757631026255	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCATTTTCTTCTTTCC	1	True	NA	22	True	AATAAA	-16	NA	72727923	72756196	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_72728008_72728925_72729094_72734959_72735006_72737961_72738044_72743536_72743603_72744504_72744562_72744980_72745208_72745943_72746077_72746500_72747112_72753689_72753822_72755150
H1_mix_00022884	chr13	+	2863	16	FSM	ENSG00000083535.16	ENST00000617689.4	2882	16	-14	33	-7	-33	multi-exon	TRUE	canonical	2	42	junction_8	9.51396634193939	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTACAAAGAATAAAATTAAC	-5	True	NA	NA	False	NA	NA	NA	72782125	72974218	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_72782350_72783422_72783722_72792446_72792548_72795358_72795558_72797906_72798027_72821848_72821983_72827009_72827119_72827732_72827915_72835242_72835369_72854056_72854156_72893783_72893950_72908530_72908682_72917075_72917167_72931164_72931268_72965273_72965405_72973590
H1_mix_00022887	chr13	+	696	7	FSM	ENSG00000118939.18	ENST00000471792.6	696	7	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	416.47568956663	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAACTATTTTAATTTG	-18	True	NA	NA	False	NA	NA	NA	75549482	75594990	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_75549671_75549975_75549988_75560752_75560882_75566694_75566852_75567226_75567313_75569459_75569508_75594914
H1_mix_00022888	chr13	+	1123	9	FSM	ENSG00000118939.18	ENST00000377595.8	931	9	-282	90	26	0	multi-exon	FALSE	canonical	3	1059	junction_8	56.9802597396677	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTGCCTTAACCTGTG	8	True	NA	27	True	ATTAAA	-14	NA	75549508	75605930	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_75549863_75549975_75549988_75560752_75560882_75566694_75566852_75567226_75567313_75569459_75569508_75594914_75594991_75604768_75604828_75605728
H1_mix_00022889	chr13	+	848	8	NIC	ENSG00000118939.18	novel	931	9	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	395.247377974754	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCTTAACCTGTGTTT	-6	True	NA	30	True	ATTAAA	-17	NA	75549774	75605933	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_75549863_75560752_75560882_75566694_75566852_75567226_75567313_75569459_75569508_75594914_75594991_75604768_75604828_75605728
H1_mix_00022893	chr13	+	3472	24	FSM	ENSG00000136153.20	ENST00000377499.9	3472	24	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_17	33.9632849691828	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAAATGGTAAATGCG	-13	True	NA	NA	False	AATAAA	-36	NA	75636322	75845368	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_75636727_75713181_75713253_75727028_75727099_75760931_75761039_75795400_75795432_75796635_75796750_75800683_75800883_75804288_75804542_75809153_75809184_75817160_75817279_75819392_75819536_75821176_75821610_75823564_75823874_75833050_75833166_75834225_75834388_75835232_75835340_75836396_75836458_75838139_75838197_75840084_75840111_75840390_75840496_75841108_75841202_75841627_75841984_75842850_75842917_75845326
H1_mix_00022894	chr13	+	5126	28	NIC	ENSG00000136153.20	novel	7147	31	NA	NA	0	274	combination_of_known_junctions	FALSE	canonical	3	33	junction_17	31.485838478455	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTATGGTGAGAGTGATG	-13	True	NA	NA	False	GATAAA	-24	NA	75636322	75858949	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_75636727_75713181_75713253_75727028_75727099_75760931_75761039_75795400_75795432_75796635_75796750_75800683_75800883_75804288_75804542_75809153_75809184_75817160_75817279_75819392_75819536_75821176_75821610_75823564_75823874_75833050_75833166_75834225_75834388_75835232_75835340_75836396_75836458_75838139_75838197_75840084_75840111_75840390_75840496_75841108_75841202_75841627_75841984_75842850_75842917_75845326_75845380_75849078_75849293_75853091_75853389_75856505_75856609_75857920
H1_mix_00022898	chr13	+	2353	3	FSM	ENSG00000102805.16	ENST00000485938.4	2341	3	-12	0	3	0	multi-exon	FALSE	canonical	3	88	junction_2	13	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTAAAGGATATGTTAAC	-40	True	NA	NA	False	ATTAAA	-45	NA	76992046	76997863	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_76992272_76995062_76995229_76995901
H1_mix_00022902	chr13	+	3166	8	NIC	ENSG00000139737.22	novel	2637	8	NA	NA	-9	0	combination_of_known_junctions	TRUE	canonical	3	139	junction_2	60.546153756402	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATCAGGTCATGCATGAA	NA	False	NA	15	True	AATAAA	-15	NA	77697677	77764227	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_77698540_77719531_77719672_77743015_77743166_77744282_77744433_77746513_77746856_77753202_77753359_77760827_77761111_77763144
H1_mix_00022903	chr13	+	2359	4	FSM	ENSG00000227354.7	ENST00000654024.1	2359	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	10.1980390271856	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGGTACATAGTGAATACAA	-7	True	NA	NA	False	NA	NA	NA	79406292	79424022	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_79406478_79417834_79417917_79420759_79420816_79421986
H1_mix_00022904	chr13	+	1348	5	NNC	ENSG00000227354.7	novel	1502	5	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	12.1732288239399	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCGGAAATGATTTTGAAAAT	-5	True	NA	0	True	AATAAA	-16	NA	79406294	79422948	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_79406478_79412681_79412747_79417834_79417917_79420759_79420816_79421986
H1_mix_00022907	chr13	+	4666	8	FSM	ENSG00000102471.15	ENST00000612570.4	4648	8	-18	0	-18	0	multi-exon	FALSE	canonical	3	283	junction_7	22.0305909765378	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATTTATGTTCATTT	4349	False	NA	NA	False	AATAAA	-19	NA	79481105	79556070	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_79481525_79520809_79520976_79533322_79533457_79539681_79539776_79543557_79543683_79548327_79548395_79551016_79551123_79552515
H1_mix_00022909	chr13	+	1201	2	Genic_Genomic	ENSG00000214182.5	novel	1162	1	NA	NA	0	34794	multi-exon	FALSE	non_canonical	0	0	junction_1	0	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGCCACACATTGGACAAT	16	False	NA	NA	False	AAAACA	-13	NA	81689910	81725866	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr13_+_81691083_81725837
H1_mix_00022913	chr13	+	3273	1	FSM	ENSG00000283705.1	ENST00000385233.3	78	1	0	-3195	0	3195	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATGGCGTTTTTGTTT	1917	False	NA	21	True	AATAAA	-23	NA	91351313	91354586	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_91351300_91354600
H1_mix_00022919	chr13	+	2466	5	FSM	ENSG00000134873.10	ENST00000299339.3	2466	5	0	0	0	0	multi-exon	FALSE	canonical	3	587	junction_3	42.2315048275574	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCTTGAAATATCTTTT	-8	True	NA	4	True	AATAAA	-19	NA	95552719	95579759	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_95552974_95560131_95560294_95560381_95560464_95577230_95577339_95577899
H1_mix_00022926	chr13	+	3688	16	FSM	ENSG00000065150.21	ENST00000491555.5	3688	16	0	0	0	0	multi-exon	FALSE	canonical	3	1181	junction_1	209.406420362149	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACTGTCTGGCTTGGATT	8751	False	NA	35	True	AATAAA	-37	NA	98001645	98022503	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_98002592_98002683_98002774_98002863_98003038_98006129_98006349_98008058_98008143_98009880_98010014_98010102_98010225_98012245_98012343_98014041_98014215_98015529_98015642_98015725_98015782_98016728_98016852_98018484_98018705_98019580_98019810_98020991_98021134_98021735
H1_mix_00022927	chr13	+	4951	28	FSM	ENSG00000152767.17	ENST00000595437.5	4926	28	-27	2	-27	0	multi-exon	FALSE	canonical	2	15	junction_1	161.988932542066	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTGTCTGTAGTCTTCA	NA	False	NA	50	True	AAAACA	-4	NA	98142534	98449771	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_98142778_98213219_98213414_98343761_98343867_98365394_98365438_98368116_98368196_98377820_98377919_98384729_98384845_98385666_98385815_98388382_98388479_98389956_98390121_98390811_98390881_98393642_98393719_98395226_98395477_98409337_98409526_98410733_98410824_98411900_98412035_98424571_98424651_98431042_98431281_98435575_98435707_98437765_98437859_98438803_98438873_98439106_98439197_98439960_98440044_98440122_98440236_98440669_98440837_98446097_98446206_98446665_98446818_98448235
H1_mix_00022928	chr13	+	5214	27	FSM	ENSG00000152767.17	ENST00000319562.11	10419	27	-200	5405	-200	0	multi-exon	FALSE	canonical	3	442	junction_8	48.3132193065554	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTGTCTGTAGTCTTCA	252	False	NA	50	True	AAAACA	-4	NA	98142893	98449771	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_98143493_98213219_98213414_98343761_98343867_98365394_98365438_98368116_98368196_98377820_98377919_98384729_98384845_98385666_98385815_98388382_98388479_98389956_98390121_98390811_98390881_98393642_98393719_98395226_98395477_98409337_98409526_98410733_98410824_98411900_98412035_98424571_98424651_98431042_98431281_98435575_98435707_98438803_98438873_98439106_98439197_98439960_98440044_98440122_98440236_98440669_98440837_98446097_98446206_98446665_98446818_98448235
H1_mix_00022929	chr13	+	5107	28	FSM	ENSG00000152767.17	ENST00000627049.2	5103	28	-4	0	0	0	multi-exon	FALSE	canonical	3	16	junction_19	137.0775015333	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTGTCTGTAGTCTTCA	-2	True	NA	50	True	AAAACA	-4	NA	98143093	98449771	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_98143493_98213219_98213414_98343761_98343867_98365394_98365438_98368116_98368196_98377820_98377919_98384729_98384845_98385666_98385815_98388382_98388479_98389956_98390121_98390811_98390881_98393642_98393719_98395226_98395477_98409337_98409526_98410733_98410824_98411900_98412035_98424571_98424651_98431042_98431281_98435575_98435707_98437765_98437859_98438803_98438873_98439106_98439197_98439960_98440044_98440122_98440236_98440669_98440837_98446097_98446206_98446665_98446818_98448235
H1_mix_00022930	chr13	+	13532	13	FSM	ENSG00000152767.17	ENST00000596580.2	13532	13	0	0	0	0	multi-exon	FALSE	canonical	3	442	junction_8	23.5171332342094	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGGCCTTTTTCTCCGG	-1	True	NA	27	True	AATAAA	-20	NA	98143415	98407494	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_98143493_98213219_98213414_98343761_98343867_98365394_98365438_98368116_98368196_98377820_98377919_98384729_98384845_98385666_98385815_98388382_98388479_98389956_98390121_98390811_98390881_98393642_98393719_98395226
H1_mix_00022931	chr13	+	1021	3	FSM	ENSG00000152767.17	ENST00000376581.9	1021	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	244.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTTTGTCTTACCAGC	63	False	NA	NA	False	AATAAA	-17	NA	98143479	98245304	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_98143493_98213219_98213414_98244490
H1_mix_00022934	chr13	+	2254	9	FSM	ENSG00000134882.16	ENST00000403766.8	2259	9	0	5	0	-5	multi-exon	FALSE	canonical	3	506	junction_8	30.7164451068153	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAATCCTCCGCACTGCTC	-2	True	NA	5	True	AATAAA	-35	NA	99200853	99386499	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_99200940_99238426_99238555_99243831_99243952_99244514_99244625_99314096_99314221_99318021_99318070_99340319_99340566_99367786_99367907_99385227
H1_mix_00022936	chr13	+	2333	7	FSM	ENSG00000134882.16	ENST00000376440.6	2525	7	192	0	185	0	multi-exon	FALSE	canonical	2	5	junction_2	261.192617302506	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTCAGTATTTTTCTAT	216	False	NA	23	True	AATAAA	-17	NA	99201100	99386427	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_99201568_99238426_99238555_99314096_99314221_99318021_99318070_99340319_99340566_99367786_99367907_99385227
H1_mix_00022937	chr13	+	3417	17	FSM	ENSG00000125304.10	ENST00000376387.5	3417	17	0	0	0	0	multi-exon	FALSE	canonical	3	1358	junction_5	198.62165667419	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTTTTTTTTTGAGA	-1	True	NA	NA	False	NA	NA	NA	99501471	99564048	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_99501778_99517613_99517682_99520035_99520130_99529466_99529595_99536607_99536738_99537738_99537864_99539445_99539558_99540713_99540794_99541558_99541668_99543862_99543996_99546984_99547105_99549164_99549223_99552166_99552327_99554303_99554456_99555535_99555648_99559362_99559535_99562690
H1_mix_00022939	chr13	+	976	5	ISM	ENSG00000125246.16	ENST00000339105.9	1181	9	-12	27335	5	-3	5prime_fragment	FALSE	canonical	3	88	junction_1	8.09320702811932	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCGTTGCTTCAGTATTT	1	True	NA	5	True	AATAAA	-19	NA	99606677	99865235	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr13_+_99606758_99772823_99773011_99858860_99859050_99862990_99863093_99864817
H1_mix_00022940	chr13	+	1175	9	FSM	ENSG00000125246.16	ENST00000339105.9	1181	9	0	6	0	-6	multi-exon	FALSE	canonical	3	66	junction_7	16.3013611394877	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGAGACTCTGGACGACTGT	13	True	NA	4	True	ATTAAA	-16	NA	99606689	99892564	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_99606758_99772823_99773011_99858860_99859050_99862990_99863093_99864817_99864912_99866239_99866408_99870937_99871063_99891317_99891438_99892442
H1_mix_00022941	chr13	+	980	5	NNC	ENSG00000125246.16	novel	712	3	NA	NA	111813	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	37.0033782241568	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTGCTTCAGTATTTTGT	NA	False	NA	8	True	AATAAA	-22	NA	99718502	99865238	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_99718584_99772823_99773011_99858860_99859050_99862990_99863093_99864817
H1_mix_00022944	chr13	+	2362	23	FSM	ENSG00000175198.17	ENST00000376279.7	2418	23	56	0	-22	0	multi-exon	FALSE	canonical	3	59	junction_21	64.7628381605653	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTAGTTTGCCCTTTC	-16	True	NA	29	True	AATAAA	-16	NA	100089070	100530432	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_100089226_100102882_100102961_100111840_100111889_100111992_100112062_100154978_100155093_100157286_100157341_100209331_100209464_100235841_100235879_100257594_100257674_100262728_100262832_100268688_100268784_100273195_100273347_100301459_100301604_100302923_100302999_100307191_100307261_100309832_100309909_100330560_100330672_100340156_100340260_100368471_100368575_100425632_100425732_100449251_100449306_100527674_100527753_100530097
H1_mix_00022945	chr13	+	2425	23	FSM	ENSG00000175198.17	ENST00000376286.8	2481	23	56	0	-22	0	multi-exon	FALSE	canonical	3	13	junction_1	75.2363218946235	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTAGTTTGCCCTTTC	-16	True	NA	29	True	AATAAA	-16	NA	100089070	100530432	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_100089226_100111840_100111889_100111992_100112062_100154978_100155093_100157286_100157341_100209331_100209464_100235841_100235879_100257594_100257674_100262728_100262832_100268688_100268784_100273195_100273347_100301459_100301604_100302923_100302999_100307191_100307261_100309832_100309909_100330560_100330672_100340156_100340260_100368471_100368575_100425632_100425732_100449251_100449306_100515426_100515568_100527674_100527753_100530097
H1_mix_00022947	chr13	+	1533	8	FSM	ENSG00000175198.17	ENST00000637358.1	1533	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_7	122.088291905523	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTCTGTGGTTTCTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	100102898	100237497	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_100102961_100111840_100111889_100111992_100112062_100154978_100155093_100157286_100157341_100209331_100209464_100235841_100235879_100236480
H1_mix_00022952	chr13	+	5484	30	FSM	ENSG00000134900.12	ENST00000376052.5	5484	30	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_24	65.6734797715426	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGCCTATTCATTTGTG	-15	True	NA	NA	False	AATAAA	-17	NA	102596985	102679958	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_102597204_102604792_102604922_102614100_102614197_102616395_102616501_102618721_102618847_102622876_102623041_102627011_102627167_102627847_102627925_102629481_102629610_102630095_102630196_102633949_102634099_102635586_102635703_102636223_102636393_102637081_102637240_102638238_102638316_102640269_102640377_102643221_102643377_102644556_102644674_102644908_102645010_102646293_102646391_102647206_102647345_102648906_102649152_102649407_102649487_102651358_102651398_102657055_102657208_102663647_102663745_102664794_102664926_102674282_102674491_102676295_102676416_102678226
H1_mix_00022953	chr13	+	332	2	FSM	ENSG00000134900.12	ENST00000496126.1	332	2	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAATTCTGGGTGAGTGT	NA	False	NA	NA	False	NA	NA	NA	102626899	102627912	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_102627167_102627847
H1_mix_00022954	chr13	+	548	4	FSM	ENSG00000134900.12	ENST00000650771.1	548	4	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_3	7.71722460186015	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCATGCTAGAGGTGAGA	NA	False	NA	NA	False	AAAAAG	-23	NA	102640295	102645103	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_102640377_102643221_102643377_102644556_102644674_102644908
H1_mix_00022959	chr13	+	4985	14	FSM	ENSG00000134899.24	ENST00000682632.1	4733	14	-254	2	-59	0	multi-exon	TRUE	canonical	3	56	junction_8	14.7307190197979	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTAACTGGTGGCACG	NA	False	NA	-11	True	AATGAA	-19	NA	102845771	102875972	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_102846355_102852117_102852294_102853756_102853873_102854287_102854375_102856051_102856113_102858274_102858419_102861506_102861715_102862029_102863104_102865666_102865912_102866261_102866382_102866631_102866846_102868112_102868258_102872197_102873344_102875306
H1_mix_00022961	chr13	+	382	1	FSM	ENSG00000227590.2	ENST00000429024.1	411	1	-20	49	-20	-49	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCTCTTCTGTTGAATGA	16	False	NA	NA	False	NA	NA	NA	106663416	106663798	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_106663400_106663800
H1_mix_00022968	chr13	+	6268	48	FSM	ENSG00000134871.19	ENST00000360467.7	6446	48	0	178	0	4	multi-exon	TRUE	canonical	3	385	junction_6	104.927507364467	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGTTGACCGCCTTAAT	-1	True	NA	28	True	AATAAA	-28	NA	110307283	110513031	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_110307529_110307859_110307948_110308068_110308124_110357471_110357553_110424733_110424869_110424952_110424998_110428466_110428584_110429884_110429957_110430400_110430437_110430544_110430608_110432324_110432361_110434400_110434443_110436268_110436368_110438001_110438038_110438617_110438669_110439788_110439834_110445828_110445883_110446797_110446865_110449678_110449790_110450304_110450455_110457342_110457436_110458770_110458935_110462113_110462187_110462277_110462385_110465404_110465607_110466002_110466063_110467039_110467097_110469216_110469325_110472928_110473151_110478002_110478165_110480219_110480391_110482515_110482660_110484904_110485028_110485654_110485837_110489444_110489509_110489710_110489786_110491232_110491341_110492069_110492178_110493210_110493283_110495341_110495468_110501667_110501785_110503120_110503283_110503382_110503482_110503846_110503994_110504147_110504265_110506414_110506607_110507934_110508222_110511933
H1_mix_00022975	chr13	+	2692	10	FSM	ENSG00000213995.12	ENST00000309957.3	2692	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	64.8211213863026	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGAGTATTGTATTTTT	-6	True	NA	8	True	ATTAAA	-20	NA	110615627	110639993	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_110615775_110622215_110622367_110624233_110624280_110625189_110625279_110627438_110627548_110634544_110634596_110634671_110634777_110635467_110635589_110637128_110637250_110638241
H1_mix_00022981	chr13	+	4773	20	NIC	ENSG00000102606.19	novel	5032	20	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	3	31	junction_3	54.5584136372655	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGAATGTGTCGCTTCGT	13	True	NA	13	True	ATTAAA	-20	NA	111153681	111305730	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_111153722_111153904_111153992_111205288_111205374_111217678_111217881_111233204_111233294_111243871_111243967_111244198_111244295_111267547_111267671_111273813_111273953_111274730_111274791_111275531_111275679_111277586_111277674_111280271_111280351_111280537_111280678_111283138_111283364_111286146_111286241_111288353_111288444_111300747_111300848_111301477_111301533_111302990
H1_mix_00022982	chr13	+	4889	21	NIC	ENSG00000102606.19	novel	5233	21	NA	NA	0	-9	combination_of_known_junctions	FALSE	canonical	3	76	junction_3	51.3881309253411	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTATGTCACAGAATGTGT	20	True	NA	5	True	ATTAAA	-12	NA	111153688	111305722	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_111153722_111153904_111153992_111205288_111205374_111209871_111210003_111217678_111217881_111233204_111233294_111243871_111243967_111244198_111244295_111267547_111267671_111273813_111273953_111274730_111274791_111275531_111275679_111277586_111277674_111280271_111280351_111280537_111280678_111283138_111283364_111286146_111286241_111288353_111288444_111300747_111300848_111301477_111301533_111302990
H1_mix_00022983	chr13	+	5041	20	FSM	ENSG00000102606.19	ENST00000375736.8	5032	20	-9	0	-9	0	multi-exon	FALSE	canonical	3	76	junction_2	50.3533772837346	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAATGTGTCGCTTCGTC	8	True	NA	14	True	ATTAAA	-21	NA	111153728	111305731	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_111153992_111205288_111205374_111209871_111210003_111217678_111217881_111233204_111233294_111243871_111243967_111244198_111244295_111267547_111267671_111273813_111273953_111274730_111274791_111275531_111275679_111277586_111277674_111280271_111280351_111280537_111280678_111283138_111283364_111286146_111286241_111288353_111288444_111300747_111300848_111301477_111301533_111302990
H1_mix_00022984	chr13	+	5262	6	ISM	ENSG00000102606.19	ENST00000426073.6	4921	20	94328	6	-1646	0	3prime_fragment	FALSE	canonical	3	199	junction_3	32.6704759683724	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAATGTGTCGCTTCGTC	5563	False	NA	14	True	ATTAAA	-21	NA	111281181	111305731	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr13_+_111283364_111286146_111286241_111288353_111288444_111300747_111300848_111301477_111301533_111302990
H1_mix_00022987	chr13	+	9086	30	FSM	ENSG00000068650.19	ENST00000375645.8	9086	30	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_29	25.775533385057	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGTGTACATTTTCTGC	-1	True	NA	33	True	AATAAA	-45	NA	112690037	112887168	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_112690456_112785134_112785258_112804956_112805047_112806212_112806294_112810618_112810727_112816082_112816212_112819303_112819408_112819899_112819951_112823344_112823410_112824343_112824426_112825429_112825581_112826693_112826892_112831374_112831549_112832859_112833024_112834588_112834661_112836177_112836252_112842275_112842380_112851036_112851219_112854278_112854531_112855910_112856086_112857817_112857921_112858144_112858291_112859392_112859453_112860286_112860415_112862439_112862576_112871734_112871801_112873572_112873677_112875775_112875942_112878216_112878304_112881875
H1_mix_00022988	chr13	+	9109	29	FSM	ENSG00000068650.19	ENST00000375630.6	8768	29	-346	5	-55	-5	multi-exon	FALSE	canonical	3	39	junction_28	16.7415833255071	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAGTGGTGTGTACATTT	-13	True	NA	28	True	AATAAA	-40	NA	112689982	112887163	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_112690456_112785134_112785258_112804956_112805047_112806212_112806294_112810618_112810727_112816082_112816212_112819303_112819408_112819899_112819951_112823344_112823410_112824343_112824426_112825429_112825581_112826693_112826892_112831374_112831549_112832859_112833024_112834588_112834661_112836177_112836252_112842275_112842380_112851036_112851219_112854278_112854531_112855910_112856086_112857817_112857921_112858144_112858291_112859392_112859453_112860286_112860415_112862439_112862576_112871734_112871801_112873572_112873677_112875775_112875942_112881815
H1_mix_00022989	chr13	+	3163	23	FSM	ENSG00000068650.19	ENST00000418678.5	3163	23	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_8	11.7716742245777	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTTCAGGGTGTCTTT	NA	False	NA	9	True	TTTAAA	-45	NA	112785171	112860798	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_112785258_112804956_112805047_112806212_112806294_112810618_112810727_112816082_112816212_112819303_112819408_112819899_112819951_112823344_112823410_112824343_112824426_112825429_112825581_112826693_112826892_112831374_112831549_112832859_112833024_112834588_112834661_112836177_112836252_112842275_112842380_112851036_112851219_112854278_112854531_112855910_112856086_112857817_112857921_112858144_112858291_112859392_112859453_112860286
H1_mix_00022991	chr13	+	3648	30	FSM	ENSG00000126217.21	ENST00000375608.7	3648	30	0	0	0	0	multi-exon	TRUE	canonical	3	44	junction_20	11.2878245098022	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCCTCGGCGCCGGAGACC	16	True	NA	NA	False	NA	NA	NA	112894377	113096861	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_112894432_112902198_112902372_113014762_113014847_113024643_113024759_113045270_113045362_113060592_113060713_113064303_113064421_113064935_113065086_113066045_113066171_113070058_113070174_113074443_113074564_113074997_113075190_113075965_113076158_113077051_113077212_113078362_113078437_113078665_113078740_113081212_113081280_113082426_113082543_113083997_113084068_113084891_113084985_113085085_113085179_113086123_113086250_113087234_113087457_113087706_113087800_113088326_113088406_113088561_113088629_113089609_113089729_113094513_113094636_113096370_113096484_113096549
H1_mix_00022993	chr13	+	6413	30	FSM	ENSG00000126217.21	ENST00000535094.7	6427	30	9	5	9	2	multi-exon	FALSE	canonical	3	7	junction_1	15.9808148950133	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCATTATGAACACCTTTC	2	True	NA	5	True	AATAAA	-19	NA	112969222	113099737	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_112969459_113014762_113014847_113024643_113024759_113045270_113045362_113060592_113060713_113064303_113064421_113064935_113065086_113066045_113066171_113070058_113070174_113074443_113074564_113074997_113075190_113075965_113076158_113077051_113077212_113078362_113078437_113078665_113078740_113081212_113081280_113082426_113082543_113083997_113084068_113084891_113084985_113085085_113085179_113086123_113086250_113087234_113087457_113087706_113087800_113088326_113088406_113088561_113088629_113089609_113089729_113094513_113094636_113096370_113096484_113096549_113096654_113096773
H1_mix_00022994	chr13	+	566	6	FSM	ENSG00000126217.21	ENST00000420013.5	566	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	38.2256458415028	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCCTTCTCCGACCTGCA	NA	False	NA	NA	False	NA	NA	NA	113089635	113096832	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_113089729_113091120_113091196_113094513_113094636_113096370_113096484_113096549_113096654_113096773
H1_mix_00022999	chr13	+	5834	20	FSM	ENSG00000139842.15	ENST00000375440.9	5821	20	-13	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	261.517349519536	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGACCCGTTGCCCCT	-16	True	NA	10	True	AATATA	-17	NA	113209599	113267108	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_113209776_113209972_113210089_113218944_113219049_113227975_113228046_113229445_113229520_113233176_113233340_113233896_113233987_113235062_113235146_113236822_113236891_113239432_113239552_113242967_113243161_113244409_113244515_113244948_113245060_113245151_113245238_113245955_113246064_113253081_113253196_113254692_113254799_113254952_113255126_113260606_113260760_113263486
H1_mix_00023000	chr13	+	882	4	FSM	ENSG00000139842.15	ENST00000474116.5	866	4	-16	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	606.353215726793	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATCTCAGAATTCTGCTG	-16	True	NA	NA	False	NA	NA	NA	113209599	113219812	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_113209776_113209972_113210089_113218944_113219049_113219326
H1_mix_00023001	chr13	+	2036	6	FSM	ENSG00000139842.15	ENST00000488558.2	1111	6	-925	0	-19	0	multi-exon	FALSE	canonical	0	0	junction_3	537.95219118431	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATGAGCTTTAAACCCAA	NA	False	NA	75	True	CATAAA	-17	NA	113208674	113230212	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_113209776_113209972_113210089_113218944_113219049_113227975_113228046_113229445_113229520_113229641
H1_mix_00023006	chr13	+	2843	9	FSM	ENSG00000150403.18	ENST00000474393.5	2843	9	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_8	48.3074463721692	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGCTTCTGCTTACCGAG	28	True	NA	10	True	AATAAA	-15	NA	113491095	113535286	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_113491274_113495501_113496026_113498341_113498522_113499957_113500150_113501751_113501881_113503495_113503589_113510237_113510425_113520615_113520734_113534044
H1_mix_00023007	chr13	+	2301	11	NIC	ENSG00000150403.18	novel	3058	13	NA	NA	55	0	combination_of_known_splicesites	FALSE	canonical	3	65	junction_9	110.695799378296	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGTATTGAGCTTAT	2298	False	NA	22	True	ATTAAA	-16	NA	113495925	113550229	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_113496026_113498341_113498522_113499957_113500150_113501751_113501881_113503495_113503589_113510237_113510425_113520615_113520734_113534044_113534241_113539356_113539508_113548302_113548453_113549424
H1_mix_00023008	chr13	+	2825	3	FSM	ENSG00000150403.18	ENST00000622371.1	2822	3	-3	0	0	0	multi-exon	FALSE	canonical	3	439	junction_1	9	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCTGGGTCCTAATGAAAA	6393	False	NA	NA	False	ATTAAA	-15	NA	113500020	113506062	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_113500150_113501751_113501881_113503495
H1_mix_00023012	chr13	+	592	3	FSM	ENSG00000198176.13	ENST00000464794.5	447	3	-145	0	-133	0	multi-exon	FALSE	canonical	3	71	junction_2	223.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCGCAGCGAATCCTGCA	NA	False	NA	26	True	AATAAA	-34	NA	113584587	113586180	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_113584889_113585773_113585850_113585965
H1_mix_00023013	chr13	+	2659	12	FSM	ENSG00000198176.13	ENST00000375370.10	2639	12	-20	0	0	0	multi-exon	FALSE	canonical	3	440	junction_11	59.7157177144239	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTTCTCTAATTCAG	10	True	NA	13	True	AATAAA	-24	NA	113584732	113641473	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_113584889_113585773_113585850_113610995_113611063_113623179_113623287_113631622_113631745_113633119_113633286_113633889_113634034_113634533_113634603_113635976_113636129_113636533_113636701_113637817_113637897_113640119
H1_mix_00023014	chr13	+	2659	12	NNC	ENSG00000198176.13	novel	2639	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	159	junction_11	127.931864613438	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTTCTCTAATTCAG	-2	True	NA	13	True	AATAAA	-24	NA	113584720	113641473	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_113584889_113585773_113585850_113610995_113611063_113623179_113623287_113631622_113631745_113633119_113633286_113633889_113634034_113634533_113634603_113635976_113636129_113636533_113636701_113637817_113637885_113640119
H1_mix_00023017	chr13	+	2035	9	FSM	ENSG00000184497.13	ENST00000375353.5	6117	9	-4	4086	-4	956	multi-exon	TRUE	canonical	2	8	junction_7	10.1111015720346	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGGTGAGTCACGGGTC	-28	True	NA	NA	False	NA	NA	NA	113759221	113812909	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_113759316_113766114_113766258_113769097_113769161_113795147_113795238_113799338_113799420_113800826_113800913_113801652_113801813_113804884_113805029_113811735
H1_mix_00023019	chr13	+	2228	19	FSM	ENSG00000130177.16	ENST00000360383.7	2211	19	-17	0	-17	0	multi-exon	FALSE	canonical	3	167	junction_18	63.3482438588474	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTATGTCTTTTTTTTTCT	-15	True	NA	14	True	AATAAA	-15	NA	114234869	114272675	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_114235133_114236644_114236700_114236798_114236897_114238989_114239029_114239349_114239491_114242120_114242281_114243256_114243349_114243855_114243990_114244889_114244970_114245999_114246050_114246930_114247005_114250548_114250675_114257077_114257231_114259334_114259399_114261886_114261949_114262878_114263015_114265149_114265241_114272183_114272482_114272563
H1_mix_00023020	chr13	+	2350	18	FSM	ENSG00000130177.16	ENST00000356221.8	2331	18	-19	0	-9	0	multi-exon	FALSE	canonical	3	318	junction_2	39.3163022968536	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTGATTTACAGAAAAAT	-7	True	NA	8	True	AATAAA	-18	NA	114234877	114272723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_114235133_114236644_114236700_114236798_114236897_114238989_114239029_114239349_114239491_114242120_114242281_114243256_114243349_114243855_114243990_114244889_114244970_114245999_114246050_114246930_114247005_114250548_114250675_114257077_114257231_114259334_114259399_114261886_114261949_114262878_114263015_114265149_114265241_114272183
H1_mix_00023021	chr13	+	1003	6	FSM	ENSG00000130177.16	ENST00000494766.5	1003	6	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_2	37.1084895947006	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATCAGTCCAAGTATGTT	71	False	NA	NA	False	TTTAAA	-35	NA	114235017	114242675	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_114235133_114236644_114236700_114236798_114236897_114238989_114239029_114239349_114239491_114242120
H1_mix_00023024	chr13	+	567	2	FSM	ENSG00000169062.15	ENST00000492270.1	494	2	-73	0	-71	0	multi-exon	FALSE	canonical	3	172	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTCCGTTCCGTCAAAGA	NA	False	NA	NA	False	AATAAA	-16	NA	114281529	114282270	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_114281847_114282020
H1_mix_00023025	chr13	+	1519	6	NNC	ENSG00000169062.15	novel	2370	10	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_5	145.719456490889	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACAGCCACATTGTTTAT	-6	True	NA	0	True	AATAAA	-12	NA	114281627	114287614	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_114281847_114282020_114282128_114282836_114282944_114286301_114286401_114286518_114286630_114286738
H1_mix_00023026	chr13	+	1117	6	NNC	ENSG00000169062.15	novel	2370	10	NA	NA	0	169	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_5	141.046091757269	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCCGTTCACTTTCTTCA	-6	True	NA	18	True	AATAAA	-22	NA	114281627	114287786	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_114281847_114282020_114282128_114282836_114282944_114286301_114286401_114286518_114286630_114287312
H1_mix_00023027	chr13	+	2235	9	FSM	ENSG00000169062.15	ENST00000351487.5	2235	9	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	108.88526071053	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGAAATATTCTTTGAA	-6	True	NA	-1	True	AATAAA	-16	NA	114281627	114305808	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_114281847_114282020_114282128_114282836_114282944_114286518_114286630_114291488_114291545_114291633_114291793_114298839_114299001_114301730_114302026_114304788
H1_mix_00023028	chr13	+	2377	10	NIC	ENSG00000169062.15	novel	2235	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	148.168072734236	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGAAATATTCTTTGAA	-6	True	NA	-1	True	AATAAA	-16	NA	114281627	114305808	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_114281847_114282020_114282128_114282836_114282944_114286258_114286401_114286518_114286630_114291488_114291545_114291633_114291793_114298839_114299001_114301730_114302026_114304788
H1_mix_00023030	chr13	+	2183	9	ISM	ENSG00000169062.15	ENST00000375299.8	2370	10	352	9	0	0	3prime_fragment	FALSE	canonical	3	251	junction_2	81.1918060828801	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGAAATATTCTTTGAA	276	False	NA	-1	True	AATAAA	-16	NA	114281952	114305808	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr13_+_114282128_114282836_114282944_114286301_114286401_114286518_114286630_114291488_114291545_114291633_114291793_114298839_114299001_114301730_114302026_114304788
H1_mix_00023035	chr13	+	615	3	FSM	ENSG00000198824.7	ENST00000478022.3	615	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	22	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAAGGTGTTCAGTCTTTC	20	True	NA	58	True	AGTAAA	-19	NA	114314530	114322441	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_114314644_114321109_114321233_114322062
H1_mix_00023036	chr13	-	264	1	FSM	ENSG00000242756.2	ENST00000436571.1	331	1	67	0	67	0	mono-exon	FALSE	NA	NA	NA	NA	NA	621	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGCAGTGGTGGGATCT	NA	False	NA	NA	False	CATAAA	-28	NA	18838031	18837767	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_18837800_18838000
H1_mix_00023037	chr13	-	579	2	ISM	ENSG00000227879.2	ENST00000442352.1	665	5	22973	-273	22973	273	3prime_fragment	FALSE	canonical	3	221	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATCTCAATAAAGAAATCA	NA	False	NA	NA	False	AATATA	-37	NA	19204459	19201363	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr13_-_19201823_19204339
H1_mix_00023038	chr13	-	379	1	FSM	ENSG00000215349.2	ENST00000400109.2	1033	1	523	131	523	-131	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCATATAAGGATCTCGG	NA	False	NA	NA	False	CATAAA	-34	NA	19305102	19304723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_19304700_19305100
H1_mix_00023039	chr13	-	1111	1	FSM	ENSG00000215572.2	ENST00000400596.2	1257	1	149	-3	149	3	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGGTGGGACTGGTGGGG	3732	False	NA	NA	False	NA	NA	NA	19561120	19560009	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_19560000_19561100
H1_mix_00023040	chr13	-	1676	8	FSM	ENSG00000121390.19	ENST00000471658.5	1647	8	-25	-4	0	0	multi-exon	FALSE	canonical	3	61	junction_1	141.519307112896	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGTCATTTTGTGACC	2	True	NA	-17	True	ATTAAA	-18	NA	19782942	19674751	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_19674985_19677723_19677824_19730238_19730345_19741564_19741650_19751270_19751468_19759322_19759419_19772241_19772544_19782385
H1_mix_00023041	chr13	-	1709	8	FSM	ENSG00000121390.19	ENST00000492741.5	1709	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	148.316952393673	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGGTGTGGTGGTCTTG	2	True	NA	-2	True	ATTAAA	-17	NA	19782942	19675387	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_19675654_19677723_19677824_19730238_19730345_19741564_19741650_19751270_19751468_19759322_19759419_19772241_19772544_19782385
H1_mix_00023043	chr13	-	2435	9	FSM	ENSG00000121390.19	ENST00000338910.9	2435	9	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_3	61.7493674056666	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTGAAGGCAAATCTCT	-1	True	NA	NA	False	AATAAA	-22	NA	19782945	19702499	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_19703361_19705661_19705832_19709541_19709600_19730238_19730345_19741564_19741650_19751270_19751468_19759322_19759419_19772241_19772544_19782385
H1_mix_00023044	chr13	-	6123	10	FSM	ENSG00000121390.19	ENST00000619300.4	2013	10	17	-4127	0	3756	multi-exon	FALSE	canonical	3	21	junction_9	122.338328690017	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATCCTGTATTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	19783002	19698743	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_19703361_19705661_19705832_19709541_19709600_19730238_19730345_19741564_19741650_19751270_19751468_19759322_19759419_19772241_19772544_19782385_19782792_19782916
H1_mix_00023045	chr13	-	3200	6	FSM	ENSG00000132950.19	ENST00000535942.5	3200	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	32.3332646047379	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAAGTGTTATGGGCTT	-4	True	NA	NA	False	ATTAAA	-21	NA	19863612	19823481	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_19825236_19835476_19835690_19837655_19837822_19851354_19852191_19862398_19862467_19863449
H1_mix_00023046	chr13	-	3283	8	FSM	ENSG00000132950.19	ENST00000337963.9	3283	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	25.5494718184952	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAAGTGTTATGGGCTT	-2	True	NA	NA	False	ATTAAA	-21	NA	19863649	19823481	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_19825236_19835476_19835690_19837655_19837822_19838699_19838986_19851354_19851449_19851688_19852191_19862398_19862467_19863449
H1_mix_00023047	chr13	-	2121	6	FSM	ENSG00000132950.19	ENST00000382905.8	1382	6	-88	-651	0	639	multi-exon	FALSE	canonical	3	40	junction_1	22.7367543857957	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTAACTAAATTTGGTGT	-4	True	NA	NA	False	TATAAA	-6	NA	19863612	19836813	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_19837822_19838699_19838986_19851354_19851449_19851688_19852191_19862398_19862467_19863449
H1_mix_00023048	chr13	-	1906	5	FSM	ENSG00000132950.19	ENST00000382907.8	1092	5	-175	-639	-34	639	multi-exon	FALSE	canonical	3	23	junction_1	30.2985148150862	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTAACTAAATTTGGTGT	NA	False	NA	NA	False	TATAAA	-6	NA	19863683	19836813	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_19837822_19851354_19851449_19851688_19852191_19862398_19862467_19863449
H1_mix_00023049	chr13	-	1261	5	NIC	ENSG00000132950.19	novel	1382	6	NA	NA	21	-2	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	39.789288759665	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATCTGTTTCTATGGAAT	160	False	NA	-1	True	AATAAA	-27	NA	19863487	19837454	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_19837822_19838699_19838986_19851688_19852191_19862398_19862467_19863449
H1_mix_00023050	chr13	-	2290	2	FSM	ENSG00000165474.8	ENST00000382848.5	2290	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAATCTAATATGGTTT	-2	True	NA	NA	False	ATTAAA	-19	NA	20192938	20187469	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_20189604_20192782
H1_mix_00023051	chr13	-	1485	8	FSM	ENSG00000165475.15	ENST00000298248.12	1483	8	0	-2	0	0	multi-exon	FALSE	canonical	2	9	junction_6	3.36852174930046	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTCTCTTTTGGTTTTT	-22	True	NA	1	True	AATAAA	-23	NA	20525857	20403666	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_20404243_20404634_20404742_20413281_20413388_20432101_20432297_20439592_20439755_20489369_20489497_20512442_20512551_20525753
H1_mix_00023052	chr13	-	1054	5	FSM	ENSG00000150456.11	ENST00000382758.6	1054	5	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	7.17635004720366	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTGGTAGCATCCTAGG	-12	True	NA	NA	False	NA	NA	NA	20773961	20728730	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_20729217_20731840_20732122_20737722_20737806_20757454_20757618_20773920
H1_mix_00023053	chr13	-	478	3	NIC	ENSG00000150456.11	novel	1054	5	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	23.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGTTTCCTTAGGGAGG	0	True	NA	-30	True	AATAAA	-15	NA	20773949	20728930	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_20729217_20757454_20757618_20773920
H1_mix_00023054	chr13	-	9931	23	FSM	ENSG00000132953.18	ENST00000255305.11	9857	23	-64	-10	-63	10	multi-exon	TRUE	non_canonical	0	0	junction_3	35.5978746231562	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATTTCATTTCATTAGAC	217	False	NA	4	True	AATAAA	-32	NA	20902810	20777318	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_20783920_20786964_20787058_20787480_20787599_20788485_20788617_20790461_20790581_20796075_20796257_20796763_20797058_20799164_20799340_20800155_20800326_20800830_20800991_20807456_20807635_20808435_20808582_20809082_20809226_20809790_20809968_20821703_20821879_20822131_20822290_20827066_20827180_20842894_20843049_20843769_20843887_20855626_20855766_20862716_20862859_20868595_20868702_20902669
H1_mix_00023055	chr13	-	9859	23	NNC	ENSG00000132953.18	novel	9857	23	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	2	73	junction_3	23.6001470789646	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGAAAACAGATTTCATT	1	True	NA	-5	True	AATAAA	-23	NA	20902747	20777327	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_20783920_20786964_20787058_20787480_20787598_20788484_20788617_20790461_20790581_20796075_20796257_20796763_20797058_20799164_20799340_20800155_20800326_20800830_20800991_20807456_20807635_20808435_20808582_20809082_20809226_20809790_20809968_20821703_20821879_20822131_20822290_20827066_20827180_20842894_20843049_20843769_20843887_20855626_20855766_20862716_20862859_20868595_20868702_20902669
H1_mix_00023057	chr13	-	898	5	FSM	ENSG00000132953.18	ENST00000490513.1	914	5	16	0	16	0	multi-exon	FALSE	canonical	3	23	junction_3	70.4556598152341	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTGGTAAGTGTGCTAT	-5	True	NA	NA	False	NA	NA	NA	20903032	20855633	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_20855766_20862716_20862859_20862968_20863124_20868595_20868702_20902669
H1_mix_00023058	chr13	-	5550	8	FSM	ENSG00000150457.9	ENST00000382592.5	5546	8	0	-4	0	4	multi-exon	FALSE	canonical	3	27	junction_6	8.79471084092651	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTGGTGTCATGTCTTA	-38	True	NA	-2	True	ATTAAA	-19	NA	21061586	20973031	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_20975365_20979690_20979798_20981465_20981649_20983223_20983807_20987880_20989305_20991271_20991405_21045684_21046231_21061345
H1_mix_00023060	chr13	-	2745	8	FSM	ENSG00000165480.16	ENST00000400018.7	2745	8	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	161.696112053015	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGGTTTGGCAAAGTC	11	True	NA	-1	True	AATAAA	-19	NA	21176547	21153594	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_21155151_21157921_21158126_21159901_21159988_21161789_21161876_21167987_21168400_21172338_21172505_21172619_21172682_21176374
H1_mix_00023061	chr13	-	2803	8	FSM	ENSG00000165480.16	ENST00000298260.8	2803	8	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_7	134.502105286611	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGGTTTGGCAAAGTC	10	True	NA	-1	True	AATAAA	-19	NA	21176548	21153594	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_21155151_21155692_21155812_21157921_21158126_21159901_21159988_21161789_21161876_21167987_21168400_21172338_21172505_21176374
H1_mix_00023062	chr13	-	2869	9	FSM	ENSG00000165480.16	ENST00000314759.6	2869	9	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_2	88.5549793913363	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGGTTTGGCAAAGTC	6	True	NA	-1	True	AATAAA	-19	NA	21176552	21153594	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_21155151_21155692_21155812_21157921_21158126_21159901_21159988_21161789_21161876_21167987_21168400_21172338_21172505_21172619_21172682_21176374
H1_mix_00023063	chr13	-	750	3	FSM	ENSG00000165480.16	ENST00000462482.1	750	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	171.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTTGCTGTTTGCAAAC	7	True	NA	NA	False	NA	NA	NA	21176551	21154696	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_21155151_21155692_21155812_21176374
H1_mix_00023064	chr13	-	930	5	FSM	ENSG00000165480.16	ENST00000465471.5	930	5	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_4	202.935180538023	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTATAAGAATCAAGTT	7	True	NA	NA	False	AAAAAG	-3	NA	21176551	21161789	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_21161876_21167987_21168400_21172338_21172505_21172619_21172682_21176347
H1_mix_00023065	chr13	-	5343	13	NNC	ENSG00000180776.16	novel	5338	12	NA	NA	0	400	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	78.3274377214013	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGTAGCTATATTTATAA	-57	True	NA	-6	True	ATTAAA	-15	NA	21459369	21372170	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_21374500_21374896_21376656_21381433_21381547_21382919_21383010_21387507_21387635_21391721_21391855_21400372_21400494_21401652_21401686_21402796_21402867_21413651_21413773_21421060_21421165_21425651_21425679_21459053
H1_mix_00023066	chr13	-	5337	12	NIC	ENSG00000180776.16	novel	5355	13	NA	NA	6	0	intron_retention	FALSE	canonical	3	136	junction_2	35.394587997378	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTTCTTTGTTATAAAG	-51	True	NA	-6	True	AATAAA	-19	NA	21459363	21372570	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_21376656_21381433_21381550_21382919_21383010_21387507_21387635_21391721_21391855_21400372_21400494_21401652_21401686_21402796_21402867_21413651_21413773_21421060_21421165_21425651_21425679_21459053
H1_mix_00023067	chr13	-	5340	12	FSM	ENSG00000180776.16	ENST00000382466.7	5338	12	0	-2	0	0	multi-exon	FALSE	canonical	3	62	junction_2	53.4216039500411	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTTCTTTGTTATAAAG	-57	True	NA	-6	True	AATAAA	-19	NA	21459369	21372570	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_21376656_21381433_21381547_21382919_21383010_21387507_21387635_21391721_21391855_21400372_21400494_21401652_21401686_21402796_21402867_21413651_21413773_21421060_21421165_21425651_21425679_21459053
H1_mix_00023068	chr13	-	5317	11	FSM	ENSG00000180776.16	ENST00000542645.5	5315	11	0	-2	0	0	multi-exon	FALSE	canonical	3	6	junction_10	74.6405385832659	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTTCTTTGTTATAAAG	-58	True	NA	-6	True	AATAAA	-19	NA	21459370	21372570	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_21376656_21381433_21381550_21382919_21383010_21387507_21387635_21391721_21391855_21400372_21400494_21401652_21401686_21402796_21402867_21413651_21413773_21421060_21421165_21459053
H1_mix_00023069	chr13	-	1343	10	NIC	ENSG00000180776.16	novel	5338	12	NA	NA	2	-22	combination_of_known_splicesites	FALSE	canonical	3	13	junction_9	85.5998442366184	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCATATGTATTTTTTGA	11	True	NA	NA	False	NA	NA	NA	21459301	21376368	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_21376656_21381433_21381547_21382919_21383010_21387507_21387635_21391721_21391855_21400372_21400494_21401652_21401686_21402796_21402867_21413651_21413773_21459053
H1_mix_00023073	chr13	-	1907	13	NNC	ENSG00000165487.14	novel	1885	12	NA	NA	0	51141	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	96.2163000166234	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGGGCGTGGTGGCGGGCG	-3	True	NA	NA	False	AATACA	-27	NA	21604165	21441549	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_21441577_21492690_21493354_21495160_21495319_21496051_21496161_21502925_21503098_21510003_21510102_21514352_21514419_21521244_21521328_21522602_21522651_21539301_21539378_21539656_21539689_21566796_21566945_21603938
H1_mix_00023074	chr13	-	1885	12	FSM	ENSG00000165487.14	ENST00000382374.9	1885	12	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_4	33.7462578274299	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGAGGTGCTTTTTATTT	-8	True	NA	NA	False	AATAAA	-23	NA	21604170	21492690	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_21493354_21495160_21495319_21496051_21496161_21502925_21503098_21510003_21510102_21514352_21514419_21521244_21521328_21522602_21522651_21539301_21539378_21539656_21539689_21566796_21566945_21603938
H1_mix_00023075	chr13	-	280	1	FSM	ENSG00000226525.5	ENST00000464254.1	603	1	302	21	302	-21	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAACAAAAATGACTACATA	346	False	NA	NA	False	NA	NA	NA	21628713	21628433	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_21628400_21628700
H1_mix_00023076	chr13	-	908	1	FSM	ENSG00000232187.1	ENST00000450676.1	552	1	-195	-161	-195	161	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCACCCAAAAAAAAAGCAGA	13	False	NA	NA	False	AATAAA	-15	NA	22696769	22695861	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_22695900_22696800
H1_mix_00023077	chr13	-	3176	10	FSM	ENSG00000151835.17	ENST00000684497.1	3168	10	6	-14	-6	14	multi-exon	FALSE	canonical	0	0	junction_1	13.8804418757713	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGGCTCTGGGTCTCTTC	NA	False	NA	NA	False	AATAAA	-15	NA	23433746	23322286	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_23322645_23353784_23353877_23354518_23356008_23358334_23358482_23365165_23365278_23368401_23368488_23371077_23371166_23375118_23375270_23411219_23411741_23433614
H1_mix_00023078	chr13	-	15635	10	FSM	ENSG00000151835.17	ENST00000382292.9	15635	10	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	9.13006159296628	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCGTAATGGGTGTTTCC	2	True	NA	-7	True	AATAAA	-20	NA	23433702	23328829	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_23341691_23353784_23353877_23354518_23356008_23358334_23358482_23365165_23365278_23368401_23368488_23371077_23371166_23375118_23375270_23411219_23411741_23433614
H1_mix_00023079	chr13	-	15181	9	NIC	ENSG00000151835.17	novel	7009	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	19	junction_1	9.12414379544733	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCATCGTAATGGGTGTT	-2	True	NA	-10	True	AATAAA	-17	NA	23375509	23328832	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_23341691_23353784_23353877_23354518_23356008_23358334_23358482_23365165_23365278_23368401_23368488_23371077_23371166_23375118_23375270_23375351
H1_mix_00023080	chr13	-	513	2	FSM	ENSG00000151835.17	ENST00000476776.1	513	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTTAAAAGTTTTCTGT	NA	False	NA	-15	True	AATAAA	-20	NA	23354890	23353735	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_23353877_23354518
H1_mix_00023083	chr13	-	2389	19	FSM	ENSG00000027001.10	ENST00000382172.4	2381	19	0	-8	0	8	multi-exon	FALSE	canonical	3	151	junction_12	23.1095752694809	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCACCTGTTTGGCAAATA	22	True	NA	-15	True	AATAAA	-25	NA	23889400	23730180	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_23730446_23756544_23756619_23760095_23760218_23805949_23806070_23809849_23809925_23836239_23836350_23837551_23837757_23839648_23839727_23841334_23841489_23858859_23858913_23862301_23862363_23864140_23864190_23869291_23869449_23870012_23870196_23874845_23874910_23879267_23879355_23881698_23881788_23886332_23886507_23889131
H1_mix_00023085	chr13	-	5439	34	FSM	ENSG00000102699.6	ENST00000381989.4	5437	34	0	-2	0	2	multi-exon	FALSE	canonical	3	218	junction_27	28.4013282323683	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTTTCTGTGTCTCATT	-12	True	NA	-3	True	AATAAA	-18	NA	24512778	24420928	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_24421315_24426465_24426599_24431376_24431477_24434394_24435475_24441845_24441969_24442589_24442686_24443649_24443731_24446680_24446762_24447015_24447187_24449717_24449818_24452405_24452594_24453586_24453655_24455016_24455213_24456340_24456479_24459043_24459123_24459263_24459311_24459971_24460137_24469023_24469111_24469893_24470026_24475471_24475597_24477700_24477858_24478092_24478277_24484652_24484749_24486167_24486306_24490667_24490829_24492420_24492595_24493595_24493734_24494572_24494723_24498115_24498230_24499300_24499377_24500315_24500383_24501632_24501835_24503644_24503778_24512705
H1_mix_00023086	chr13	-	5096	17	FSM	ENSG00000151849.16	ENST00000381884.9	5082	17	0	-14	0	14	multi-exon	FALSE	canonical	3	119	junction_15	19.5560093066045	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTATATATAGATGTATC	-19	True	NA	NA	False	AATAAA	-28	NA	24922861	24882264	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_24883370_24883962_24884084_24884160_24884246_24884322_24884464_24885275_24885387_24885605_24885671_24889315_24889401_24892642_24892868_24899418_24899585_24903925_24904059_24905345_24906961_24907090_24907194_24908017_24908127_24909789_24910087_24911945_24912070_24912581_24913092_24922760
H1_mix_00023087	chr13	-	5019	16	FSM	ENSG00000151849.16	ENST00000616936.4	5020	16	20	-19	-8	14	multi-exon	FALSE	canonical	1	1	junction_6	42.0949191972407	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTATATATAGATGTATC	-27	True	NA	NA	False	AATAAA	-28	NA	24922869	24882264	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_24883370_24883962_24884084_24884160_24884246_24884322_24884464_24885275_24885387_24885605_24885671_24892642_24892868_24899418_24899585_24903925_24904059_24905345_24906961_24907090_24907194_24908017_24908127_24909789_24910087_24911945_24912070_24912581_24913092_24922760
H1_mix_00023088	chr13	-	4194	17	NNC	ENSG00000151849.16	novel	4298	18	NA	NA	0	125	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_3	36.5357273774589	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATTTTTATATTCTTTG	32	True	NA	-26	True	AATAAA	-18	NA	24922810	24883037	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_24883370_24883962_24884084_24884160_24884246_24884400_24884464_24885275_24885387_24885605_24885671_24889315_24889401_24892642_24892868_24899418_24899585_24903925_24904059_24905345_24906961_24907090_24907194_24908017_24908127_24909789_24910087_24911945_24912070_24912581_24913092_24922760
H1_mix_00023089	chr13	-	2192	5	ISM	ENSG00000253771.7	ENST00000429698.2	1150	7	38	14474	0	2654	5prime_fragment	FALSE	canonical	1	4	junction_1	10.3198837202751	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCGGTTTAGCATTTCC	31	False	NA	NA	False	NA	NA	NA	24968455	24939147	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr13_-_24940786_24941986_24942109_24942931_24943022_24951396_24951489_24968205
H1_mix_00023091	chr13	-	349	1	FSM	ENSG00000232858.1	ENST00000428810.1	349	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTAAAAAAACGAAACTTT	27	False	NA	NA	False	NA	NA	NA	24988925	24988576	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_24988600_24988900
H1_mix_00023092	chr13	-	9761	1	FSM	ENSG00000165566.13	ENST00000515384.2	10610	1	738	111	738	-106	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTCTTGTTCCATTCA	43	True	NA	NA	False	AATGAA	-23	NA	25171550	25161789	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_25161800_25171600
H1_mix_00023093	chr13	-	5112	14	FSM	ENSG00000139505.12	ENST00000381801.6	5117	14	0	5	0	-5	multi-exon	FALSE	canonical	3	65	junction_7	12.3028836760152	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTAGTTATTTCTAGGAAA	-26	True	NA	NA	False	AATAAA	-15	NA	25287488	25246226	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_25249493_25251648_25251776_25251852_25251985_25253763_25253965_25254384_25254435_25257195_25257322_25257735_25257846_25258559_25258693_25261667_25261803_25265818_25265948_25266128_25266287_25267778_25267942_25274070_25274188_25287223
H1_mix_00023094	chr13	-	3845	2	FSM	ENSG00000180730.5	ENST00000319420.4	3845	2	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_1	0	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTAGCGGAGTTGGGTTT	0	True	NA	-33	True	AATAAA	-17	NA	26052016	26044596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_26047067_26050641
H1_mix_00023095	chr13	-	949	6	FSM	ENSG00000127870.17	ENST00000468480.5	1105	6	0	156	0	-156	multi-exon	FALSE	canonical	1	2	junction_1	44.8526476364551	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACAACATTTGTTTTGTC	29	True	NA	NA	False	NA	NA	NA	26222261	26132270	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_26132452_26215473_26215593_26218510_26218607_26219456_26219668_26221247_26221331_26222002
H1_mix_00023097	chr13	-	3283	5	FSM	ENSG00000127870.17	ENST00000346166.7	3282	5	0	-1	0	1	multi-exon	FALSE	canonical	3	24	junction_4	37.5666075125237	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTTTCTGTTGTTCCA	-15	True	NA	-6	True	AATAAA	-27	NA	26221842	26212760	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_26215593_26218510_26218607_26219456_26219668_26221247_26221331_26221781
H1_mix_00023098	chr13	-	3533	5	FSM	ENSG00000127870.17	ENST00000381588.9	3520	5	0	-13	0	0	multi-exon	FALSE	canonical	3	39	junction_4	31.4990079208854	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGTTTTTCTGTTGTTCC	-24	True	NA	-7	True	AATAAA	-26	NA	26222314	26212761	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_26215593_26218510_26218607_26219456_26219668_26221247_26221331_26222002
H1_mix_00023099	chr13	-	2816	6	NNC	ENSG00000127870.17	novel	3520	5	NA	NA	9	-4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	44.5421149026402	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTATGTTTTTCTGTTG	-15	True	NA	-11	True	AATAAA	-22	NA	26222305	26212765	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_26214770_26215473_26215593_26218510_26218607_26219456_26219668_26221247_26221331_26222002
H1_mix_00023100	chr13	-	4416	9	FSM	ENSG00000152484.14	ENST00000282344.11	4412	9	0	-4	0	4	multi-exon	FALSE	canonical	3	176	junction_5	15.9604002142803	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTCAAGTGTGTTTTT	0	True	NA	-15	True	ATTAAA	-20	NA	27171811	27066151	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_27069385_27071070_27071150_27075190_27075389_27089882_27089967_27090081_27090159_27095600_27095831_27105730_27105945_27116515_27116597_27171591
H1_mix_00023101	chr13	-	349	2	FSM	ENSG00000152484.14	ENST00000620323.1	349	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGGGCTAATTATTTT	110	False	NA	2	True	ATTAAA	-29	NA	27171701	27170090	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_27170330_27171591
H1_mix_00023102	chr13	-	896	3	FSM	ENSG00000122033.15	ENST00000405591.3	889	3	0	-7	0	0	multi-exon	FALSE	canonical	3	484	junction_2	42	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGCTCCTTGGTCTGCAG	9931	False	NA	-4	True	AATAAA	-23	NA	27440475	27435642	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_27435894_27437115_27437274_27439988
H1_mix_00023103	chr13	-	995	5	FSM	ENSG00000122033.15	ENST00000381120.8	995	5	0	0	0	0	multi-exon	FALSE	canonical	3	397	junction_4	62.547481963705	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGCTCCTTGGTCTGCAG	7	True	NA	-4	True	AATAAA	-23	NA	27450564	27435642	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_27435894_27437115_27437274_27439988_27440450_27445087_27445157_27450508
H1_mix_00023104	chr13	-	832	5	FSM	ENSG00000122033.15	ENST00000485650.5	798	5	0	-34	0	0	multi-exon	FALSE	canonical	3	35	junction_3	203.841850462558	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGTAAAGAAGGTACAAG	-20	True	NA	NA	False	CATAAA	-38	NA	27450591	27437115	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_27437274_27439988_27440450_27441016_27441078_27445087_27445157_27450508
H1_mix_00023105	chr13	-	373	3	FSM	ENSG00000122033.15	ENST00000484342.2	373	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	203.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGTCAGCGAGTTATTCA	-16	True	NA	NA	False	AATAAA	-28	NA	27450587	27440205	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_27440450_27445087_27445138_27450508
H1_mix_00023107	chr13	-	4834	10	FSM	ENSG00000139517.9	ENST00000316334.5	4750	10	-79	-5	-79	5	multi-exon	FALSE	canonical	3	77	junction_5	8.73618839393479	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTGTCTCTTTTCTTGAA	-41	True	NA	0	True	AATAAA	-23	NA	27620608	27545907	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_27548471_27550332_27550492_27553207_27553440_27556235_27556414_27559841_27559986_27562412_27562782_27567639_27567840_27569028_27569277_27581296_27581804_27620374
H1_mix_00023108	chr13	-	4594	10	NNC	ENSG00000139517.9	novel	4750	10	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_7	28.581268146968	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGACGTTGTCTCTTTTC	-5	True	NA	-5	True	AATAAA	-18	NA	27620514	27545912	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_27548471_27550332_27550492_27553207_27553440_27556235_27556414_27559841_27559986_27562412_27562782_27567639_27567840_27569169_27569277_27581296_27581804_27620374
H1_mix_00023109	chr13	-	3741	24	FSM	ENSG00000122025.15	ENST00000241453.12	3826	24	0	85	0	-85	multi-exon	FALSE	canonical	0	0	junction_19	2.85768290872261	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGCGGCCTTCCCAGA	7	True	NA	NA	False	CATAAA	-21	NA	28100576	28003358	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_28004175_28014451_28014558_28015156_28015257_28015589_28015702_28018466_28018590_28023349_28023478_28024860_28024944_28027087_28027242_28028177_28028289_28033886_28033992_28034081_28034215_28034300_28034408_28035494_28035674_28035934_28036044_28037184_28037289_28048274_28048444_28049383_28049538_28049634_28049775_28050094_28050223_28052544_28052675_28057346_28057463_28061866_28062070_28070490_28070613_28100467
H1_mix_00023110	chr13	-	7132	30	FSM	ENSG00000102755.12	ENST00000282397.9	7123	30	0	-9	0	9	multi-exon	TRUE	canonical	3	40	junction_16	52.819842774523	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGATTTGCTTGTTAAG	-1	True	NA	6	True	AATAAA	-24	NA	28495128	28300336	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_28303369_28306677_28306773_28308842_28308928_28311589_28311733_28311992_28312099_28317497_28317598_28319422_28319535_28321462_28321586_28322261_28322360_28322789_28322947_28327461_28327551_28329614_28329729_28334024_28334130_28339167_28339301_28345444_28345552_28357553_28357686_28384884_28385032_28389795_28390105_28396959_28397069_28405779_28405895_28427158_28427319_28427751_28427922_28430049_28430168_28431135_28431311_28433818_28433956_28434057_28434221_28438220_28438346_28466902_28467130_28467520_28467618_28494779
H1_mix_00023112	chr13	-	6464	13	FSM	ENSG00000102755.12	ENST00000615840.4	6453	13	0	-11	0	11	multi-exon	FALSE	canonical	3	124	junction_9	20.8531572349768	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGCTGCCTTACAACTT	200	False	NA	93	True	AATAAA	-31	NA	28495079	28385536	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_28390105_28396959_28397069_28405779_28405895_28427158_28427319_28427751_28427922_28430049_28430168_28431135_28431311_28433818_28433956_28434057_28434221_28438220_28438346_28466902_28467130_28467520_28467618_28494779
H1_mix_00023113	chr13	-	3301	6	FSM	ENSG00000139508.15	ENST00000266943.11	3302	6	1	0	1	0	multi-exon	FALSE	canonical	2	6	junction_2	1.74355957741627	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAATGACTACAAAATTTT	-8	True	NA	NA	False	AATAAA	-17	NA	28718969	28700079	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_28701582_28703942_28704100_28710759_28710844_28712679_28713551_28717809_28718023_28718495
H1_mix_00023114	chr13	-	2121	7	FSM	ENSG00000139508.15	ENST00000380814.4	2121	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3.24893144826965	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTGAATGAACAGCTAA	-9	True	NA	NA	False	AATAAA	-20	NA	28718970	28700716	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_28700957_28701500_28701582_28703942_28704100_28710759_28710844_28712679_28713551_28717809_28718023_28718495
H1_mix_00023115	chr13	-	7363	14	NNC	ENSG00000139514.13	novel	7343	13	NA	NA	0	20976	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	66.6956347320249	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGGAAAAAAAAAAGTGCAC	-2	True	NA	NA	False	NA	NA	NA	29595688	29488437	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_29488459_29509414_29514584_29516137_29516247_29517143_29517311_29517572_29517791_29519446_29519550_29522316_29522457_29523265_29523489_29524131_29524254_29530537_29530713_29532823_29532983_29535818_29536203_29553760_29553861_29595415
H1_mix_00023116	chr13	-	7346	13	FSM	ENSG00000139514.13	ENST00000380752.10	7343	13	0	-3	0	3	multi-exon	FALSE	canonical	3	200	junction_12	22.9921484182946	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGGTGTGATCTCAAGAA	-2	True	NA	-15	True	AATAAA	-18	NA	29595688	29509410	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_29514584_29516137_29516247_29517143_29517311_29517572_29517791_29519446_29519550_29522316_29522457_29523265_29523489_29524131_29524254_29530537_29530713_29532823_29532983_29535818_29536203_29553760_29553861_29595415
H1_mix_00023117	chr13	-	4317	5	FSM	ENSG00000122042.10	ENST00000380680.5	4317	5	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_4	13.7908484148003	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGTGTATTTGCCTATT	9	True	NA	0	True	TTTAAA	-18	NA	29850617	29764370	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_29767308_29767617_29767696_29772111_29772199_29777154_29777264_29849511
H1_mix_00023118	chr13	-	7618	11	FSM	ENSG00000102781.14	ENST00000380615.8	7618	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	4.02492235949962	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTTTCTTTGTGGTTCAT	-3	True	NA	-4	True	AATAAA	-22	NA	30307551	30202629	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_30208739_30210315_30210443_30227411_30227547_30230467_30230595_30231313_30231473_30240459_30240566_30240958_30241087_30255446_30255616_30280062_30280224_30283615_30283792_30307330
H1_mix_00023119	chr13	-	5456	5	FSM	ENSG00000189403.15	ENST00000341423.10	5456	5	0	0	0	0	multi-exon	FALSE	canonical	3	2284	junction_1	3842.76621556659	1487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGATTTTTACTGGTTTT	-1	True	NA	-5	True	NA	NA	NA	30465936	30456703	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_30461534_30462537_30462713_30463206_30463353_30463530_30463695_30465795
H1_mix_00023120	chr13	-	1727	5	FSM	ENSG00000189403.15	ENST00000399489.5	1727	5	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	5635.69454459697	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTGTTGTCCTTTTCATA	55	True	NA	-35	True	AGTAAA	-18	NA	30464247	30460894	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_30461534_30461638_30461689_30462537_30462713_30463206_30463353_30463530
H1_mix_00023121	chr13	-	5775	5	FSM	ENSG00000189403.15	ENST00000326004.4	821	5	-48	-4906	-48	114	multi-exon	FALSE	canonical	3	15	junction_1	4807.76923323073	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGAGAATCAACTGAAAGA	NA	False	NA	NA	False	AAGAAA	-4	NA	30465986	30456589	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_30461689_30462537_30462713_30463206_30463353_30463530_30463695_30465795
H1_mix_00023123	chr13	-	5422	18	FSM	ENSG00000120694.20	ENST00000320027.10	5244	18	-135	-43	0	43	multi-exon	TRUE	canonical	3	717	junction_9	98.5471274679274	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGATTAACTTACTTTTCT	652	False	NA	94	True	NA	NA	NA	31162039	31134929	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_31137525_31138406_31138569_31138780_31138901_31138999_31139108_31140183_31140310_31141121_31141260_31143791_31143924_31145562_31145769_31147958_31148093_31148373_31148481_31149953_31150183_31150946_31151192_31151608_31151743_31152851_31152952_31154632_31154756_31155513_31155655_31158805_31158864_31161475
H1_mix_00023124	chr13	-	3483	17	FSM	ENSG00000120694.20	ENST00000380405.7	3480	17	0	-3	0	0	multi-exon	FALSE	canonical	3	23	junction_6	230.307097969212	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTGATTTTGTCACTAAT	764	False	NA	-14	True	AATAAA	-27	NA	31161927	31136624	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_31137525_31138406_31138569_31138780_31138901_31138999_31139108_31140183_31140310_31141121_31141260_31145562_31145769_31147958_31148093_31148373_31148481_31149953_31150183_31150946_31151192_31151608_31151743_31152851_31152952_31154632_31154756_31155513_31155655_31158805_31158864_31161475
H1_mix_00023125	chr13	-	5243	18	FSM	ENSG00000120694.20	ENST00000630972.2	3570	18	22	-1695	22	43	multi-exon	FALSE	canonical	3	53	junction_17	219.165387614075	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGATTAACTTACTTTTCT	-9	True	NA	94	True	NA	NA	NA	31162366	31134929	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_31137525_31138406_31138569_31138780_31138901_31138999_31139108_31140183_31140310_31141121_31141260_31143791_31143924_31145562_31145769_31147958_31148093_31148373_31148481_31149953_31150183_31150946_31151192_31151608_31151743_31152851_31152952_31154632_31154756_31155513_31155655_31158805_31158864_31161981
H1_mix_00023126	chr13	-	1036	4	FSM	ENSG00000120694.20	ENST00000629751.1	1034	4	0	-2	0	2	multi-exon	FALSE	canonical	3	53	junction_3	382.195703214408	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATGAGGCAGAAGAACTA	652	False	NA	NA	False	NA	NA	NA	31162039	31153976	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_31154756_31155513_31155655_31158805_31158864_31161981
H1_mix_00023127	chr13	-	687	4	FSM	ENSG00000189167.12	ENST00000345108.6	1103	4	416	0	416	0	multi-exon	FALSE	canonical	0	0	junction_1	0.816496580927726	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTACTTTTTGTAGATT	3824	False	NA	NA	False	NA	NA	NA	32311538	32303770	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_32304023_32308685_32308761_32310638_32310732_32311271
H1_mix_00023128	chr13	-	2999	5	FSM	ENSG00000139597.18	ENST00000380130.7	2999	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	5.31507290636732	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTTATGATGCAGTATGT	-4	True	NA	NA	False	AATAAA	-22	NA	32428130	32400722	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_32403201_32404320_32404398_32407249_32407339_32407644_32407773_32427903
H1_mix_00023129	chr13	-	2531	1	NIC	ENSG00000139597.18	novel	1145	2	NA	NA	527	-27	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTAATAAAAATGTTTTTG	821	False	NA	-30	True	ATTAAA	-2	NA	32427479	32424948	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_32424900_32427500
H1_mix_00023130	chr13	-	2867	8	FSM	ENSG00000244754.9	ENST00000674422.1	2873	8	6	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	96.8485036180798	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTTTCAATTTGGTACCA	5	True	NA	NA	False	AAGAAA	-14	NA	32538819	32443065	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_32444127_32517856_32518004_32521372_32521450_32522181_32522271_32527407_32527533_32535768_32537028_32538617_32538685_32538777
H1_mix_00023131	chr13	-	9427	6	FSM	ENSG00000244754.9	ENST00000267068.5	9427	6	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_5	6.49923072370877	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAAGTTGGATTTTTTTA	4	True	NA	1	True	AATAAA	-16	NA	32538782	32510291	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_32518004_32521372_32521450_32522181_32522271_32527407_32527533_32535768_32537028_32538617
H1_mix_00023132	chr13	-	3656	3	FSM	ENSG00000244754.9	ENST00000674293.1	3632	3	0	-24	0	0	multi-exon	FALSE	canonical	3	224	junction_2	8	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGAGGTCTTGTCATTC	NA	False	NA	-5	True	ATTAAA	-18	NA	32524649	32516892	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_32518004_32521372_32521450_32522181
H1_mix_00023133	chr13	-	5787	2	FSM	ENSG00000244754.9	ENST00000503814.2	5786	2	0	-1	0	0	multi-exon	FALSE	canonical	3	240	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGAGGTCTTGTCATTC	NA	False	NA	-5	True	ATTAAA	-18	NA	32526048	32516892	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_32518004_32521372
H1_mix_00023134	chr13	-	2053	6	FSM	ENSG00000244754.9	ENST00000674484.1	2053	6	0	0	0	0	multi-exon	TRUE	canonical	3	110	junction_5	47.8664809652851	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAATGTTTTTATATTC	-16	True	NA	-16	True	AATAAA	-17	NA	32538802	32517620	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_32518004_32521372_32521450_32522181_32522271_32527407_32527533_32535768_32537028_32538682
H1_mix_00023135	chr13	-	879	2	FSM	ENSG00000244754.9	ENST00000674408.1	866	2	-4	-9	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACAAAAAGTGTGCCTGG	4	True	NA	NA	False	AAAAAG	-30	NA	32538782	32526818	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_32527533_32538617
H1_mix_00023137	chr13	-	2055	3	FSM	ENSG00000244754.9	ENST00000674494.1	2055	3	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	57	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTGGGGACTTTAAAAAAA	9	False	NA	NA	False	NA	NA	NA	32538815	32526869	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_32527533_32535768_32537028_32538682
H1_mix_00023143	chr13	-	5796	14	FSM	ENSG00000133121.21	ENST00000336934.10	5915	14	1	118	1	-85	multi-exon	FALSE	canonical	0	0	junction_13	1.83328850581738	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTATACCTCATGTATAT	-27	True	NA	NA	False	AATAAA	-25	NA	33285754	33103254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_33105711_33106757_33106935_33109872_33110091_33110685_33110908_33111777_33111893_33112720_33112932_33118064_33118264_33126080_33126241_33127372_33127547_33128928_33130290_33142309_33142374_33165336_33165419_33167550_33167623_33285469
H1_mix_00023144	chr13	-	8069	17	FSM	ENSG00000133083.15	ENST00000360631.8	8394	17	0	325	0	-325	multi-exon	FALSE	canonical	2	21	junction_13	26.8627879230731	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATAATACCTTAGCTGAA	-1	True	NA	-13	True	AATAAA	-27	NA	36131382	35768976	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_35774700_35793365_35793480_35805698_35805780_35808223_35808321_35809017_35809096_35810834_35810969_35822728_35822876_35827634_35827755_35828249_35828308_35836032_35836142_35839091_35839177_35854498_35854594_35871223_35871341_35947357_35947458_36111868_36112216_36125761_36126157_36131113
H1_mix_00023145	chr13	-	4612	13	FSM	ENSG00000133083.15	ENST00000379893.5	4612	13	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_4	9.8273286751227	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTTTTGTGTTCAATG	120	False	NA	-4	True	AATAAA	-14	NA	35855642	35771338	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_35774700_35793365_35793480_35805698_35805780_35808223_35808321_35809017_35809096_35810834_35810969_35822728_35822876_35827634_35827755_35828249_35828308_35836032_35836142_35839091_35839177_35854498_35854594_35855509
H1_mix_00023146	chr13	-	5311	3	FSM	ENSG00000133083.15	ENST00000460982.1	5247	3	-65	1	12	-1	multi-exon	FALSE	canonical	3	25	junction_1	32	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTTGTTCAGTGAGTTT	NA	False	NA	-2	True	AATAAA	-14	NA	35855849	35845900	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_35850777_35854498_35854594_35855509
H1_mix_00023147	chr13	-	2101	7	FSM	ENSG00000133083.15	ENST00000379892.4	2101	7	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_3	5.5502752684489	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATATACATAATTTTTTAA	-8	True	NA	NA	False	NA	NA	NA	36131306	35849922	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_35850777_35854498_35854594_35871223_35871341_35947357_35947458_36111868_36112216_36125761_36126157_36131113
H1_mix_00023148	chr13	-	2732	16	NIC	ENSG00000250709.1	novel	2051	16	NA	NA	28	702	combination_of_known_splicesites	FALSE	canonical	3	122	junction_5	50.9629931093795	967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACATCAAATTGTACAACT	11	True	NA	NA	False	NA	NA	NA	36297814	36168091	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_36169055_36170530_36170788_36173691_36173811_36174475_36174568_36174721_36174870_36189945_36190057_36191794_36191895_36193620_36193726_36193805_36193868_36201878_36202094_36248605_36248683_36253802_36253857_36254044_36254144_36283468_36283510_36283591_36283703_36297636
H1_mix_00023149	chr13	-	2635	16	NIC	ENSG00000250709.1	novel	2051	16	NA	NA	40	578	combination_of_known_splicesites	FALSE	canonical	3	57	junction_13	45.1035352149794	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTAATCCATTTTTGTT	23	True	NA	-11	True	AATAAA	-22	NA	36297802	36168215	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_36169055_36170530_36170788_36173691_36173811_36174475_36174568_36174721_36174870_36189945_36190057_36191794_36191895_36193620_36193726_36193805_36193868_36201878_36202094_36248605_36248683_36253802_36253857_36254044_36254144_36283591_36283703_36295777_36295858_36297636
H1_mix_00023150	chr13	-	2051	16	FSM	ENSG00000250709.1	ENST00000511166.1	2051	16	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_10	71.8831150008277	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGCTACAAGAACAAATGG	-17	True	NA	NA	False	NA	NA	NA	36297842	36168793	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_36169055_36170530_36170788_36173691_36173811_36174475_36174568_36174721_36174870_36189945_36190057_36191794_36191895_36193620_36193726_36193805_36193868_36201878_36202094_36227347_36227382_36248605_36248683_36253802_36253857_36254044_36254144_36283591_36283703_36297636
H1_mix_00023152	chr13	-	4429	8	FSM	ENSG00000242715.8	ENST00000239859.8	1158	8	65	-3336	0	-319	multi-exon	FALSE	canonical	3	50	junction_1	71.4437126809116	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATATTTGTACCTTCGCT	76	False	NA	-10	True	AATAAA	-24	NA	36297749	36227438	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_36231293_36248605_36248683_36253802_36253857_36254044_36254144_36283468_36283510_36283591_36283703_36295777_36295858_36297636
H1_mix_00023154	chr13	-	972	6	NIC	ENSG00000242715.8	novel	1088	7	NA	NA	13	-52	combination_of_known_junctions	FALSE	canonical	3	50	junction_1	96.5098958656572	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGCTGGATCTTGCTC	24	True	NA	NA	False	CATAAA	-13	NA	36297801	36230826	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_36231293_36248605_36248683_36253802_36253857_36254044_36254144_36283591_36283703_36297636
H1_mix_00023156	chr13	-	1552	4	NIC	ENSG00000242715.8	novel	1632	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	94	junction_1	84.7007805290023	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGTATAGTATTTCAT	-7	True	NA	-13	True	AATAAA	-17	NA	36297832	36280056	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_36281261_36283468_36283510_36283591_36283703_36297636
H1_mix_00023157	chr13	-	1632	5	FSM	ENSG00000242715.8	ENST00000477250.1	1632	5	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	69.6132171358284	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGTATAGTATTTCAT	-7	True	NA	-13	True	AATAAA	-17	NA	36297832	36280056	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_36281261_36283468_36283510_36283591_36283703_36295777_36295858_36297636
H1_mix_00023158	chr13	-	3702	4	NIC	ENSG00000242715.8	novel	1632	5	NA	NA	13	-4	combination_of_known_junctions	FALSE	canonical	3	103	junction_1	41.3145118437685	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCAGTTGTATAGTATT	24	True	NA	-17	True	AATAAA	-13	NA	36297801	36280060	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_36283407_36283591_36283703_36295777_36295858_36297636
H1_mix_00023159	chr13	-	5078	9	FSM	ENSG00000133104.14	ENST00000451493.5	4944	9	20	-154	0	152	multi-exon	FALSE	canonical	3	488	junction_8	70.8025423272357	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCAAGAGGTAAGGTATC	-18	True	NA	NA	False	NA	NA	NA	36346777	36301485	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_36304633_36312144_36312236_36312318_36312478_36314226_36314422_36326574_36326699_36329361_36329518_36331398_36331597_36335020_36335833_36346581
H1_mix_00023160	chr13	-	4900	9	FSM	ENSG00000133104.14	ENST00000438666.7	4900	9	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_8	209.530278241594	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTCTTGACCTCC	-19	True	NA	0	True	TATAAA	-21	NA	36346394	36301637	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_36304633_36312144_36312236_36312318_36312478_36314226_36314422_36326574_36326699_36329361_36329518_36331398_36331597_36335020_36335833_36346224
H1_mix_00023161	chr13	-	4973	10	NIC	ENSG00000133104.14	novel	3018	10	NA	NA	25	0	combination_of_known_splicesites	FALSE	canonical	3	134	junction_9	229.012587933718	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTCTTGACCTCC	7	True	NA	0	True	TATAAA	-21	NA	36346752	36301637	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_36304633_36312144_36312236_36312318_36312478_36314226_36314422_36326574_36326699_36329361_36329518_36331398_36331597_36335020_36335833_36336286_36336359_36346581
H1_mix_00023163	chr13	-	5518	7	FSM	ENSG00000120693.14	ENST00000379826.5	5558	7	40	0	40	0	multi-exon	FALSE	canonical	2	6	junction_1	1.06718737290547	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTTGGCTCATTTTTC	654	False	NA	-4	True	AATAAA	-17	NA	36920198	36844830	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_36848820_36853418_36853676_36865536_36865759_36867272_36867384_36872657_36872916_36879277_36879876_36920115
H1_mix_00023165	chr13	-	1287	10	FSM	ENSG00000120697.10	ENST00000239891.4	1219	10	-27	-41	-15	41	multi-exon	FALSE	canonical	3	332	junction_5	32.9706191691188	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAAACATAATTTTTGTA	1712	False	NA	42	True	AAAAAG	-45	NA	36999367	36949696	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36994988_36995036_36995424_36995597_36999234
H1_mix_00023167	chr13	-	732	2	FSM	ENSG00000120697.10	ENST00000486410.2	722	2	0	-10	0	0	multi-exon	FALSE	canonical	3	431	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCTTTTGATAATTTTAA	NA	False	NA	-12	True	AATAAA	-15	NA	36953026	36949838	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_36950058_36952513
H1_mix_00023168	chr13	-	1417	9	FSM	ENSG00000120697.10	ENST00000681553.1	1417	9	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_5	34.8487804664668	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTCATTTCATTTGAAA	18	True	NA	-74	True	NA	NA	NA	36999312	36949900	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36994988_36995597_36999234
H1_mix_00023172	chr13	-	1857	9	FSM	ENSG00000102710.21	ENST00000484078.5	1876	9	19	0	19	0	multi-exon	FALSE	canonical	3	147	junction_2	180.870421503904	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGGCTGTTTATTTGG	NA	False	NA	-24	True	AATACA	-25	NA	37024928	37009311	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_37009810_37010551_37010656_37012191_37012298_37017244_37017365_37019341_37019398_37021447_37021603_37022010_37022081_37024034_37024194_37024339
H1_mix_00023173	chr13	-	2830	25	FSM	ENSG00000102710.21	ENST00000360252.8	2843	25	17	-4	-8	0	multi-exon	FALSE	canonical	3	114	junction_20	109.382737821529	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGGCTGTTTATTTGG	20	False	37059716	-24	True	AATACA	-25	NA	37059696	37009311	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_37009810_37012191_37012298_37017244_37017365_37019341_37019398_37021447_37021603_37022010_37022081_37024034_37024194_37024339_37024443_37025319_37025438_37026203_37026237_37026789_37026817_37028147_37028306_37029764_37029837_37031566_37031624_37031738_37031896_37033448_37033589_37040404_37040459_37040575_37040693_37044077_37044182_37045246_37045377_37047534_37047602_37047877_37047937_37048563_37048600_37051487_37051584_37059558
H1_mix_00023174	chr13	-	3673	23	FSM	ENSG00000102710.21	ENST00000495071.6	3669	23	0	-4	0	0	multi-exon	FALSE	canonical	2	14	junction_12	174.204662574829	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGGCTGTTTATTTGG	30	False	37059716	-24	True	AATACA	-25	NA	37059686	37009311	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_37009810_37012191_37012298_37017244_37017365_37019341_37019398_37021447_37021603_37022010_37023045_37024034_37024194_37024339_37024443_37025319_37025438_37026203_37026237_37026789_37026817_37028147_37028306_37031566_37031624_37031738_37031896_37033448_37033589_37040404_37040459_37040575_37040693_37044077_37044182_37045246_37045374_37047534_37047602_37047877_37047937_37051487_37051584_37059558
H1_mix_00023175	chr13	-	2923	26	FSM	ENSG00000102710.21	ENST00000350612.11	2923	26	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_2	129.513205504304	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGGCTGTTTATTTGG	28	False	37059716	-24	True	AATACA	-25	NA	37059688	37009311	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_37009810_37010551_37010656_37012191_37012298_37017244_37017365_37019341_37019398_37021447_37021603_37022010_37022081_37024034_37024194_37024339_37024443_37025319_37025438_37026203_37026237_37026789_37026817_37028147_37028306_37029764_37029837_37031566_37031624_37031738_37031896_37033448_37033589_37040404_37040459_37040575_37040693_37044077_37044182_37045246_37045374_37047534_37047602_37047877_37047937_37048563_37048600_37051487_37051584_37059558
H1_mix_00023176	chr13	-	2836	25	FSM	ENSG00000102710.21	ENST00000475892.5	2836	25	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_6	108.036251310485	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGTTGGTTTGCCTAAGT	5	True	NA	96	True	AATAAA	-24	NA	37059649	37009492	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_37009810_37012191_37012298_37017244_37017365_37019341_37019398_37021447_37021603_37022010_37022318_37024034_37024194_37024339_37024443_37025319_37025438_37026203_37026237_37026789_37026817_37028147_37028306_37029764_37029837_37031566_37031624_37031738_37031896_37033448_37033589_37040404_37040459_37040575_37040693_37044077_37044182_37045246_37045374_37047534_37047602_37047877_37047937_37048563_37048600_37051487_37051584_37059558
H1_mix_00023178	chr13	-	2625	25	FSM	ENSG00000102710.21	ENST00000464744.5	2625	25	0	0	0	0	multi-exon	FALSE	canonical	2	76	junction_24	145.033688615209	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGAGTTTCTACTTTTTG	1	True	NA	-28	True	TTTAAA	-25	NA	37059432	37009616	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_37009810_37012191_37012298_37017244_37017365_37019341_37019398_37021447_37021603_37022010_37022081_37024034_37024194_37024339_37024443_37025319_37025438_37026203_37026237_37026789_37026817_37028147_37028306_37029764_37029837_37031566_37031624_37031738_37031896_37033448_37033589_37040404_37040459_37040575_37040693_37044077_37044182_37045246_37045377_37047534_37047602_37047877_37047937_37048563_37048600_37051487_37051584_37059194
H1_mix_00023182	chr13	-	252	3	FSM	ENSG00000133110.15	ENST00000497145.1	1735	3	866	617	142	-617	multi-exon	FALSE	canonical	0	0	junction_2	1.5	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTAGTAAAAGGACAACAAC	-26	True	NA	NA	False	ATTAAA	-17	NA	37570669	37569299	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_37569384_37569743_37569822_37570579
H1_mix_00023183	chr13	-	9552	11	FSM	ENSG00000133107.15	ENST00000379705.8	7979	11	-619	-954	-589	954	multi-exon	FALSE	canonical	3	74	junction_5	23.249946236497	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGACTTATTTTATGATTTC	NA	False	NA	0	True	AATAAA	-20	NA	37870391	37631108	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_37637626_37639039_37639130_37639257_37639300_37651264_37651460_37655087_37655284_37663415_37663730_37674227_37674368_37691998_37692336_37745936_37746456_37782955_37783361_37869594
H1_mix_00023184	chr13	-	2912	10	FSM	ENSG00000133107.15	ENST00000338947.9	2912	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	36.411231478457	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAACCCACAGAAACATTT	10	False	NA	-12	True	AATAAA	-31	NA	37869802	37636640	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_37637626_37639039_37639130_37639257_37639300_37651264_37651460_37655087_37655284_37663415_37663730_37674227_37674368_37691998_37692336_37782955_37783361_37869594
H1_mix_00023185	chr13	-	3327	11	NNC	ENSG00000133107.15	novel	7979	11	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_7	36.0077769377672	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTGCAATAACCCACAGAA	6	True	NA	-18	True	AATAAA	-25	NA	37869772	37636646	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_37637626_37639039_37639130_37639257_37639300_37651264_37651460_37655087_37655284_37663415_37663730_37674227_37674368_37692066_37692336_37745936_37746456_37782955_37783361_37869594
H1_mix_00023186	chr13	-	3009	10	FSM	ENSG00000133107.15	ENST00000625583.2	3009	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	34.8425027803687	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAATGTTTAAATTGTAT	NA	False	NA	NA	False	NA	NA	NA	37783333	37636842	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_37637626_37639039_37639130_37639257_37639300_37651249_37651460_37655087_37655284_37663415_37663730_37674227_37674368_37691998_37692336_37745936_37746456_37782955
H1_mix_00023187	chr13	-	1681	5	ISM	ENSG00000133107.15	ENST00000355779.6	2784	11	30	37261	0	-10698	5prime_fragment	FALSE	canonical	3	96	junction_1	24.8042335096249	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGATGTCGTATTCATCAGC	6	True	NA	NA	False	AATAAA	-19	NA	37869772	37674125	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr13_-_37674368_37691998_37692336_37745936_37746456_37782955_37783361_37869594
H1_mix_00023188	chr13	-	5182	13	FSM	ENSG00000120685.20	ENST00000352251.8	5182	13	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_12	48.0730780513723	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGTTTTTTATATATG	-9	True	NA	-13	True	CATAAA	-17	NA	39038089	39009864	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_39011488_39012082_39012234_39012690_39014477_39017499_39017545_39022325_39022413_39023051_39023131_39024472_39024557_39026276_39026388_39028226_39028321_39029280_39029376_39031562_39031632_39034130_39034197_39037197
H1_mix_00023189	chr13	-	5103	12	FSM	ENSG00000120685.20	ENST00000625998.2	5102	12	0	-1	0	0	multi-exon	FALSE	canonical	3	36	junction_11	156.606840461516	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGTTTTTTATATATG	4	True	NA	-13	True	CATAAA	-17	NA	39038076	39009864	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_39011488_39012082_39012234_39012690_39014477_39017499_39017545_39022325_39022413_39023051_39023131_39024472_39024557_39026276_39026388_39028226_39028321_39029280_39029376_39031562_39031632_39037197
H1_mix_00023190	chr13	-	418	4	FSM	ENSG00000120685.20	ENST00000496138.2	418	4	0	0	0	0	multi-exon	FALSE	canonical	3	517	junction_3	41.4916323558806	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATATACTCCTAATCCTGT	NA	False	NA	NA	False	NA	NA	NA	39026472	39022353	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_39022413_39023051_39023131_39024472_39024557_39026276
H1_mix_00023193	chr13	-	2154	4	FSM	ENSG00000183722.9	ENST00000379589.4	2132	4	-22	0	11	0	multi-exon	TRUE	canonical	3	44	junction_3	9.2736184954957	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGATGAGTCATGGAGTG	-1	True	NA	-3	True	AATAAA	-19	NA	39603215	39342891	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_39344055_39378427_39378527_39600831_39601391_39602882
H1_mix_00023195	chr13	-	1337	8	NNC	ENSG00000102738.8	novel	1486	7	NA	NA	0	44488	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	208.960986496406	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAATTAATTAATTAATTAA	-13	True	NA	NA	False	NA	NA	NA	40771190	40684639	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_40684665_40729301_40729602_40749137_40749282_40754018_40754093_40756872_40757014_40758947_40759107_40766745_40767034_40770984
H1_mix_00023200	chr13	-	3678	9	FSM	ENSG00000120690.16	ENST00000239882.7	3678	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_8	13.5963000481749	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCAGAATATCATCCTTTC	0	True	NA	NA	False	AATAAA	-16	NA	41019316	40931923	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_40934029_40940920_40941371_40942951_40943145_40943841_40943926_40949805_40949974_40951328_40951437_40958835_40959017_40981982_40982283_41019227
H1_mix_00023201	chr13	-	4046	9	NIC	ENSG00000120690.16	novel	3678	9	NA	NA	39	-3	combination_of_known_junctions	FALSE	canonical	3	28	junction_8	8.61593726764535	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTCTGTTTTCAGGCA	-12	True	NA	-5	True	AATAAA	-15	NA	41061401	40932030	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_40934029_40940920_40941371_40942951_40943145_40943841_40943926_40949805_40949974_40951328_40951437_40958835_40959017_40981982_40982283_41060837
H1_mix_00023204	chr13	-	4737	1	FSM	ENSG00000120696.9	ENST00000379483.4	4736	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCCTGACTTTCTAATTC	-21	True	NA	-15	True	AATAAA	-19	NA	41194569	41189832	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_41189800_41194600
H1_mix_00023206	chr13	-	2390	12	NIC	ENSG00000120662.16	novel	1948	12	NA	NA	0	-8	combination_of_known_junctions	FALSE	canonical	3	22	junction_11	26.1186105714262	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATAGACTCTTTGTTTGA	260	False	NA	-25	True	TATAAA	-17	NA	41263538	41216376	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_41217229_41223255_41223355_41226431_41226569_41233889_41234008_41240260_41240434_41252644_41252753_41252948_41253031_41254528_41254621_41260492_41260916_41261690_41261826_41262214_41262332_41263484
H1_mix_00023208	chr13	-	618	3	FSM	ENSG00000120662.16	ENST00000492827.1	618	3	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGAAGTCTTGGTATTGTC	260	False	NA	NA	False	NA	NA	NA	41263538	41261332	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_41261826_41262410_41262482_41263484
H1_mix_00023210	chr13	-	482	1	FSM	ENSG00000205240.4	ENST00000419933.2	954	1	78	394	78	-394	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCATCTTGCATGTTGTGA	NA	False	NA	NA	False	NA	NA	NA	41432123	41431641	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_41431600_41432100
H1_mix_00023211	chr13	-	7184	45	FSM	ENSG00000102763.18	ENST00000379310.8	7174	45	0	-10	0	10	multi-exon	TRUE	canonical	3	19	junction_18	11.1772671817798	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTGAGTTTGCATGGCT	-9	True	NA	-1	True	AATAAA	-36	NA	41961109	41566824	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_41568306_41570467_41570707_41575739_41575839_41587511_41587671_41590639_41590766_41605167_41605277_41611575_41611733_41614975_41615085_41670945_41671148_41675214_41675297_41685046_41685243_41689353_41689509_41690165_41690276_41691319_41691446_41691873_41691939_41692861_41692973_41699070_41699271_41701391_41701531_41703302_41703412_41719590_41719743_41721369_41721576_41727193_41727314_41729541_41729678_41732079_41732156_41761127_41761205_41777984_41778057_41783794_41783902_41787436_41787544_41811224_41811341_41816697_41816776_41819217_41819387_41830528_41830643_41833370_41833532_41865735_41865814_41865901_41866037_41868345_41868478_41883386_41883492_41885919_41886029_41886780_41886831_41887196_41887362_41891419_41891588_41907585_41907697_41912037_41912169_41949935_41950014_41960852
H1_mix_00023212	chr13	-	3559	26	FSM	ENSG00000102763.18	ENST00000281496.6	3475	26	-84	0	-84	0	multi-exon	FALSE	canonical	3	35	junction_11	6.85273667960473	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTCAGTCCTTTTGTTG	NA	False	NA	-7	True	AATAAA	-26	NA	41961204	41719336	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_41719743_41721369_41721576_41727193_41727314_41729541_41729678_41732079_41732156_41761127_41761205_41777984_41778057_41783794_41783902_41787436_41787544_41811224_41811341_41816697_41816776_41819217_41819387_41830528_41830643_41833370_41833532_41865735_41865814_41865901_41866037_41868345_41868478_41883386_41883492_41885919_41886029_41886780_41886831_41887196_41887362_41891419_41891588_41907585_41907697_41912037_41912169_41949935_41950014_41960852
H1_mix_00023213	chr13	-	5245	4	NNC	ENSG00000229546.1	novel	227	2	NA	NA	-21531	2997	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_2	6.23609564462324	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCATGTCTGTTTTGT	3695	False	NA	2	True	NA	NA	NA	42864418	42839416	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_42842100_42842413_42842552_42842798_42842892_42862087
H1_mix_00023214	chr13	-	3104	4	Intergenic	novelGene_349	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	32	junction_1	4.32049379893857	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTTGTGTAATTGAGTTC	3695	False	NA	-2	True	AATAAA	-35	NA	42864418	42849694	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_-_42850693_42851288_42851502_42862087_42862166_42862603
H1_mix_00023215	chr13	-	8210	3	Intergenic	novelGene_353	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	199	junction_2	216.5	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTACTTGTGTAATTGAGT	3308	False	NA	-4	True	AATAAA	-33	NA	42872812	42849696	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_-_42850693_42862087_42862166_42865676
H1_mix_00023216	chr13	-	7439	4	Intergenic	novelGene_354	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	68	junction_3	241.003918824755	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGTACTTGTGTAATTGA	3528	False	NA	-6	True	AATAAA	-31	NA	42872592	42849698	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_-_42850693_42862087_42862166_42865676_42865810_42866358
H1_mix_00023217	chr13	-	1329	3	Intergenic	novelGene_350	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	64	junction_2	284	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTTGTGTAATTGAGTTC	3310	False	NA	-2	True	AATAAA	-35	NA	42872810	42849694	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_-_42850693_42862087_42862166_42872557
H1_mix_00023218	chr13	-	7530	3	Intergenic	novelGene_351	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	37	junction_2	297.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTTGTGTAATTGAGTTC	3308	False	NA	-2	True	AATAAA	-35	NA	42872812	42849694	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_-_42850693_42862087_42862166_42866358
H1_mix_00023220	chr13	-	3289	2	Intergenic	novelGene_357	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	632	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAAAAATAGTACTTGTG	3724	False	NA	-13	True	AATAAA	-24	NA	42864389	42849705	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_-_42850693_42862087
H1_mix_00023221	chr13	-	1412	4	Intergenic	novelGene_355	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	43	junction_2	266.451162921505	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATAGTACTTGTGTAA	3321	False	NA	-10	True	AATAAA	-27	NA	42872799	42849702	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_-_42850693_42862087_42862166_42870600_42870703_42872557
H1_mix_00023222	chr13	-	3280	3	Intergenic	novelGene_356	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	43	junction_2	294.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATAGTACTTGTGTAA	3308	False	NA	-10	True	AATAAA	-27	NA	42872812	42849702	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_-_42850693_42862087_42862166_42870600
H1_mix_00023224	chr13	-	3122	12	NIC	ENSG00000133106.15	novel	3160	13	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	65.1178207444966	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACCACTTTTTCCTTTGT	12	True	NA	-6	True	AATAAA	-37	NA	42992229	42886391	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_42888503_42889210_42889243_42895008_42895109_42900309_42900384_42917540_42917625_42926335_42926430_42953947_42954022_42963254_42963339_42964065_42964140_42969093_42969178_42970611_42970671_42991977
H1_mix_00023225	chr13	-	957	12	FSM	ENSG00000133106.15	ENST00000398762.7	957	12	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	69.3200744898094	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATATTGACTCCTATCT	76	False	NA	NA	False	NA	NA	NA	42992165	42888493	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_42888503_42895008_42895109_42900309_42900384_42917540_42917625_42919299_42919333_42926335_42926430_42953947_42954022_42963254_42963339_42964065_42964140_42969093_42969178_42970611_42970671_42991977
H1_mix_00023227	chr13	-	636	4	FSM	ENSG00000151773.13	ENST00000470137.5	704	4	0	68	0	-68	multi-exon	FALSE	canonical	1	1	junction_1	6.94422221866655	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTCCCCAAGCAGGAGCA	4810	False	NA	NA	False	AATAGA	-13	NA	43874926	43823976	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_43824012_43858780_43858898_43859671_43860071_43874841
H1_mix_00023228	chr13	-	1782	4	NNC	ENSG00000102804.15	novel	3135	3	NA	NA	0	70939	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	441.117772129948	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATGGCAAAAACCGTGAT	5	True	NA	NA	False	NA	NA	NA	44436845	44361203	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_44361230_44433521_44434884_44436043_44436096_44436503
H1_mix_00023229	chr13	-	1785	4	NNC	ENSG00000102804.15	novel	5961	3	NA	NA	14	70939	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	455.824527641942	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATGGCAAAAACCGTGAT	4323	False	NA	NA	False	NA	NA	NA	44573508	44361203	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_44361229_44433521_44434884_44436043_44436096_44573162
H1_mix_00023230	chr13	-	978	2	FSM	ENSG00000237361.4	ENST00000432701.3	1123	2	68	77	68	-77	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTTCCCAAATGTTCATT	9008	False	NA	2	True	ATTAAA	-18	NA	44405885	44400249	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_44400956_44405613
H1_mix_00023231	chr13	-	3132	3	FSM	ENSG00000102804.15	ENST00000261489.6	3135	3	0	3	0	-3	multi-exon	FALSE	canonical	3	676	junction_2	196	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACATGTTCCTCATTTTAG	5	True	NA	NA	False	ATTAAA	-13	NA	44436845	44432145	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_44434884_44436043_44436096_44436503
H1_mix_00023232	chr13	-	2863	3	FSM	ENSG00000102804.15	ENST00000622051.1	2872	3	0	9	0	-9	multi-exon	FALSE	canonical	3	31	junction_2	518.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCCATACATGTTCCTCA	-20	True	NA	NA	False	ATTAAA	-7	NA	44437254	44432151	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_44434884_44436043_44436096_44437175
H1_mix_00023233	chr13	-	5958	3	FSM	ENSG00000102804.15	ENST00000458659.3	5961	3	0	3	0	-3	multi-exon	FALSE	canonical	3	252	junction_2	408	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACATGTTCCTCATTTTAG	-3	True	NA	NA	False	ATTAAA	-13	NA	44576330	44432145	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_44434884_44436043_44436096_44573162
H1_mix_00023236	chr13	-	5361	4	NNC	ENSG00000102804.15	novel	1093	3	NA	NA	-190	1223	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	8.2192186706253	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCACTTACTGATAATGGC	1076	False	NA	NA	False	AATAAA	-20	NA	44576755	44537102	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_44538889_44539766_44539937_44573162_44576247_44576434
H1_mix_00023238	chr13	-	3480	10	FSM	ENSG00000083635.8	ENST00000379161.5	3480	10	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_8	16.6533279957291	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTGTCTTACTTTGTA	-11	True	NA	-1	True	ATTAAA	-15	NA	44989471	44939248	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_44941323_44943441_44943675_44949721_44949839_44959380_44959575_44965843_44965937_44979189_44979267_44979889_44979953_44980721_44980821_44982071_44982155_44989024
H1_mix_00023240	chr13	-	1101	5	FSM	ENSG00000133112.17	ENST00000379056.5	1101	5	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_4	1505.11843387821	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAACTTTGTCTCAGCT	1	True	NA	-8	True	AATAAA	-18	NA	45341212	45336872	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_45337389_45338659_45338777_45339496_45339603_45339993_45340185_45341041
H1_mix_00023244	chr13	-	3736	10	FSM	ENSG00000174032.17	ENST00000519676.6	3663	10	-72	-1	10	1	multi-exon	FALSE	canonical	3	21	junction_9	4.2889464590264	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCTGGTTATTTCAGAT	NA	False	NA	99	True	AATAAA	-27	NA	45418445	45393314	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_45396016_45397257_45397339_45398939_45399079_45401082_45401208_45402274_45402371_45404326_45404413_45405882_45405978_45408926_45409075_45411361_45411481_45418299
H1_mix_00023248	chr13	-	8018	19	FSM	ENSG00000123200.17	ENST00000242848.8	8018	19	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_18	55.4499273619402	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGATCTTTCCATTT	-8	True	NA	-4	True	AATAAA	-18	NA	46052746	45954464	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_45957298_45959482_45959647_45963841_45964043_45965279_45965430_45967503_45968029_45968747_45969972_45970361_45970466_45975282_45975839_45979812_45980005_45985296_45985762_45988786_45989098_46003138_46003337_46010347_46010506_46011414_46011555_46020448_46020558_46042163_46042276_46044954_46045065_46045390_46045514_46052403
H1_mix_00023249	chr13	-	7724	19	NIC	ENSG00000123200.17	novel	8018	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_18	58.9529002208072	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGATCTTTCCATTT	-8	True	NA	-4	True	AATAAA	-18	NA	46052746	45954464	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_45957298_45959482_45959647_45963841_45964043_45965279_45965430_45967503_45968029_45968747_45969972_45970361_45970466_45975282_45975839_45979812_45980005_45985296_45985762_45988786_45989098_46003138_46003337_46010347_46010506_46011414_46011555_46020448_46020558_46042163_46042276_46044954_46045065_46045390_46045514_46052697
H1_mix_00023250	chr13	-	6276	17	FSM	ENSG00000123200.17	ENST00000282007.7	6412	17	0	136	0	-136	multi-exon	FALSE	canonical	3	49	junction_16	47.5840949661754	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAAAATATGCACTGTAA	-21	True	NA	NA	False	AATACA	-36	NA	46052759	45962311	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_45964043_45965279_45965433_45967503_45968029_45968747_45969972_45970361_45970466_45975282_45975839_45979812_45980005_45985296_45985762_45988786_45989098_46003138_46003337_46010347_46010506_46011414_46011555_46020448_46020558_46042163_46042276_46044954_46045065_46045390_46045517_46052697
H1_mix_00023252	chr13	-	1285	9	NIC	ENSG00000123200.17	novel	795	4	NA	NA	13	-2	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	81.5045052435753	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGTGCTCACTTTGTGT	5	True	NA	0	True	ATTAAA	-28	NA	46052733	46001164	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_46001461_46003138_46003337_46010347_46010506_46011414_46011555_46020448_46020558_46042163_46042276_46044954_46045065_46045390_46045517_46052697
H1_mix_00023255	chr13	-	3647	16	FSM	ENSG00000136167.15	ENST00000323076.7	3643	16	0	-4	0	1	multi-exon	TRUE	canonical	2	15	junction_11	5.57215298505783	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTCTGGATGTTTCATT	-3	True	NA	-5	True	AATAAA	-17	NA	46182177	46125918	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_46127724_46130813_46130939_46134126_46134251_46142291_46142426_46143289_46143405_46144441_46144521_46146907_46147104_46148351_46148448_46150935_46151079_46152779_46152946_46154804_46154887_46156437_46156571_46158521_46158652_46158825_46158990_46159598_46159687_46182110
H1_mix_00023256	chr13	-	10445	15	FSM	ENSG00000102445.20	ENST00000429979.6	11050	15	1	604	1	-604	multi-exon	FALSE	canonical	3	6	junction_14	5.40974177964614	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-6	True	NA	NA	False	NA	NA	NA	46387251	46335284	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_46343498_46344740_46344832_46345446_46345601_46349285_46349348_46350112_46350352_46356431_46356497_46359485_46359632_46361440_46361574_46362537_46362599_46363114_46363214_46368041_46368250_46368732_46368816_46371940_46372598_46377889_46378006_46387133
H1_mix_00023257	chr13	-	2636	14	NIC	ENSG00000102445.20	novel	11050	15	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_13	5.11986501301346	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTGCTCTGGCTTTTA	8	True	NA	-9	True	NA	NA	NA	46387237	46342963	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_46343498_46344740_46344832_46345446_46345601_46349285_46349348_46350112_46350352_46356431_46356497_46359485_46359632_46361440_46361574_46362537_46362599_46363114_46363214_46368041_46368250_46368732_46368816_46371940_46372598_46387133
H1_mix_00023258	chr13	-	1123	10	FSM	ENSG00000139684.15	ENST00000378720.8	1121	10	0	-2	0	2	multi-exon	FALSE	canonical	0	0	junction_1	143.297239210782	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGATTTTAAAAGTTATTT	-9	True	NA	-16	True	AATAAA	-16	NA	46797161	46771253	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_46771497_46777455_46777624_46779934_46780034_46781495_46781616_46782666_46782792_46784251_46784351_46787020_46787110_46791345_46791421_46793396_46793445_46797104
H1_mix_00023260	chr13	-	922	6	FSM	ENSG00000139684.15	ENST00000412582.5	921	6	0	-1	0	1	multi-exon	FALSE	canonical	0	0	junction_1	174.883504082003	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACATGATTTACTCAACTT	NA	False	NA	NA	False	AATAAA	-38	NA	46784350	46775381	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_46775693_46777455_46777624_46779934_46780034_46781495_46781616_46782666_46782792_46784251
H1_mix_00023262	chr13	-	2718	1	FSM	ENSG00000260388.2	ENST00000566385.2	2470	1	-248	0	-248	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTTGTTGGGTGTATT	NA	False	NA	NA	False	AATAAA	-17	NA	47932870	47930152	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_47930200_47932900
H1_mix_00023263	chr13	-	2111	11	FSM	ENSG00000136143.16	ENST00000646932.1	2111	11	0	0	0	0	multi-exon	FALSE	canonical	3	853	junction_6	74.1012820401914	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTCATGGCTTTTGT	10	True	NA	-14	True	AATAAA	-16	NA	48001273	47942655	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_47943446_47948939_47949029_47949482_47949604_47954139_47954283_47954395_47954558_47968594_47968734_47973263_47973393_47988540_47988704_47988881_47988982_47996842_47997024_48001179
H1_mix_00023264	chr13	-	2321	11	FSM	ENSG00000136143.16	ENST00000646804.1	2321	11	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_10	283.219985170538	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAATTTAAGTTAATAAAAA	22	True	NA	14	True	AATAAA	-40	NA	48037942	47942688	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_47943446_47948939_47949029_47949482_47949604_47954139_47954283_47954395_47954558_47968594_47968734_47973263_47973393_47988540_47988704_47988881_47988982_47996842_47997024_48037605
H1_mix_00023266	chr13	-	1079	6	FSM	ENSG00000136143.16	ENST00000644338.1	1079	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	366.48165029098	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACGCTGTGGTCCTTCTTT	4	True	NA	-77	True	AATAGA	-34	NA	48001279	47971680	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_47972087_47973263_47973393_47988540_47988704_47988881_47988982_47996842_47997024_48001179
H1_mix_00023267	chr13	-	1437	4	FSM	ENSG00000136143.16	ENST00000470760.2	1445	4	0	8	0	-8	multi-exon	FALSE	canonical	3	868	junction_2	34.2669260690571	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGATATGTCTTTTGCAA	10	True	NA	NA	False	ATTAAA	-14	NA	48001273	47987641	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_47988704_47988881_47988982_47996842_47997024_48001179
H1_mix_00023268	chr13	-	1326	8	NNC	ENSG00000136146.15	novel	2254	7	NA	NA	0	34236	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	426.648208571829	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACAATGAGATCACTTCAC	8	True	NA	NA	False	NA	NA	NA	48095104	48019086	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_48019121_48076579_48077312_48079843_48079976_48081644_48081732_48083370_48083429_48086281_48086453_48090351_48090419_48095059
H1_mix_00023270	chr13	-	2254	7	FSM	ENSG00000136146.15	ENST00000258648.7	2254	7	0	0	0	0	multi-exon	FALSE	canonical	3	945	junction_6	57.8983784075359	1148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGTGGTATGTGCCA	8	True	NA	NA	False	NA	NA	NA	48095104	48075723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_48077312_48079843_48079976_48081644_48081732_48083370_48083429_48086281_48086453_48090351_48090419_48094953
H1_mix_00023271	chr13	-	2179	7	FSM	ENSG00000136146.15	ENST00000378586.5	931	7	27	-1275	0	31	multi-exon	FALSE	canonical	3	192	junction_6	315.445936554727	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTTTTATCACCAAATC	8	True	NA	NA	False	NA	NA	NA	48095104	48075692	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_48077312_48079843_48079976_48081644_48081732_48083370_48083429_48086281_48086453_48090351_48090419_48095059
H1_mix_00023272	chr13	-	234	1	FSM	ENSG00000177197.7	ENST00000452246.1	481	1	145	102	145	-102	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCAAACTCCTTCAATAAA	NA	False	NA	NA	False	NA	NA	NA	48328419	48328185	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_48328200_48328400
H1_mix_00023274	chr13	-	2966	12	FSM	ENSG00000136161.13	ENST00000544904.3	2984	12	29	-11	29	4	multi-exon	FALSE	canonical	3	30	junction_11	5.7265511810995	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGGGGTTTTTTTTAA	2668	False	NA	NA	False	AATAAA	-28	NA	48533227	48488958	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_48490252_48496190_48496322_48499620_48499761_48501741_48501869_48502723_48502915_48510628_48510772_48511769_48511878_48512015_48512175_48512728_48512896_48515204_48515356_48515585_48515742_48533027
H1_mix_00023275	chr13	-	3120	14	FSM	ENSG00000136161.13	ENST00000430805.6	3179	14	59	0	-17	0	multi-exon	FALSE	canonical	1	2	junction_11	12.3939286529987	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGAACAAATGTGTTGGG	-7	True	NA	NA	False	AATAAA	-17	NA	48533197	48488969	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_48490252_48496190_48496322_48499620_48499761_48501741_48501869_48502723_48502915_48510628_48510772_48511769_48511878_48512015_48512175_48512728_48512896_48515204_48515356_48515585_48515742_48522307_48522404_48524658_48524758_48533027
H1_mix_00023276	chr13	-	595	1	FSM	ENSG00000274929.1	ENST00000612996.1	587	1	-62	54	-62	-54	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGCTTGGCGACTTACCTT	3234	False	NA	NA	False	NA	NA	NA	48532661	48532066	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_48532100_48532700
H1_mix_00023277	chr13	-	407	1	FSM	ENSG00000235957.1	ENST00000446556.1	192	1	-82	-133	-82	133	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCCAGGACAACCCAAAGT	-2	True	NA	NA	False	AATAAA	-22	NA	49187752	49187345	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_49187300_49187800
H1_mix_00023278	chr13	-	636	2	FSM	ENSG00000288743.1	ENST00000686621.1	655	2	-66	85	-66	-85	multi-exon	FALSE	canonical	3	9	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTCTTTTTATTTTGCTT	NA	False	NA	NA	False	NA	NA	NA	49247906	49235597	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_49235962_49247634
H1_mix_00023279	chr13	-	3522	11	FSM	ENSG00000102547.19	ENST00000409308.6	3502	11	0	-20	0	20	multi-exon	TRUE	canonical	3	25	junction_2	4.62168800331654	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCATGTGTGTGGCTGT	-24	True	NA	-1	True	AATAAA	-33	NA	49444064	49308629	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_49310994_49331946_49332091_49339676_49339743_49344178_49344239_49350743_49350913_49359713_49359833_49376966_49377132_49382799_49382942_49433317_49433394_49434085_49434224_49443985
H1_mix_00023280	chr13	-	4011	13	FSM	ENSG00000136144.12	ENST00000378302.7	4008	13	0	-3	0	3	multi-exon	FALSE	canonical	3	186	junction_12	27.0102861065105	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGAGTTGTTTTTTTCCTT	0	True	NA	-2	True	AATAAA	-24	NA	49585558	49531942	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_49534263_49540875_49541007_49541675_49541828_49544736_49544864_49549457_49549649_49551325_49551469_49552177_49552286_49555514_49555674_49559917_49560085_49566617_49566769_49567153_49567321_49580504_49580585_49585443
H1_mix_00023281	chr13	-	851	3	FSM	ENSG00000123179.14	ENST00000378272.9	766	3	25	-110	0	61	multi-exon	FALSE	canonical	3	59	junction_1	502.5	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCACCAGTCTTTTTTGG	31	True	NA	26	True	NA	NA	NA	49691438	49660612	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_49661209_49669776_49669847_49691253
H1_mix_00023282	chr13	-	985	4	FSM	ENSG00000123179.14	ENST00000242827.11	977	4	0	-8	0	8	multi-exon	FALSE	canonical	3	1016	junction_2	71.1071179434395	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATATTAATTTTTTATT	-17	True	NA	-27	True	AGTAAA	-25	NA	49691486	49660665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_49661209_49663056_49663196_49669776_49669847_49691253
H1_mix_00023283	chr13	-	858	3	FSM	ENSG00000123179.14	ENST00000473576.6	810	3	-48	0	0	0	multi-exon	FALSE	canonical	3	164	junction_2	510.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCTGGCATTAATTGTT	-17	True	NA	-19	True	AATAAA	-19	NA	49691486	49660722	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_49661209_49663056_49663196_49691253
H1_mix_00023284	chr13	-	1026	5	FSM	ENSG00000123179.14	ENST00000495963.2	1026	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	544.308965570107	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCTGGCATTAATTGTT	6	True	NA	-19	True	AATAAA	-19	NA	49691463	49660722	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_49661209_49663056_49663196_49669776_49669847_49686474_49686596_49691253
H1_mix_00023287	chr13	-	4628	18	NNC	ENSG00000102753.10	novel	4222	17	NA	NA	-346	83	intron_retention	TRUE	non_canonical	0	0	junction_17	78.1377100387758	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGGAGGTAAATCATGAAT	NA	False	NA	35	True	TTTAAA	-27	NA	49793028	49699236	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_49701899_49702385_49702481_49705620_49705784_49706097_49706170_49706267_49706373_49709571_49709701_49710890_49711023_49719774_49719820_49721954_49722125_49722476_49722564_49725415_49725502_49732370_49732467_49732604_49732658_49732746_49732777_49732956_49733047_49746948_49746994_49792437_49792570_49792592
H1_mix_00023288	chr13	-	4513	17	FSM	ENSG00000102753.10	ENST00000261667.8	4222	17	-291	0	-291	0	multi-exon	FALSE	canonical	3	251	junction_1	27.8340506394596	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGAAAACTTATTTCTGA	25	False	NA	-48	True	AATAAA	-27	NA	49792973	49699319	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_49701899_49702385_49702481_49705620_49705784_49706097_49706170_49706267_49706373_49709571_49709701_49710890_49711023_49719774_49719820_49721954_49722125_49722476_49722564_49725415_49725502_49732370_49732467_49732604_49732658_49732746_49732777_49732956_49733047_49746948_49746994_49792437
H1_mix_00023291	chr13	-	3068	4	FSM	ENSG00000123178.15	ENST00000378195.6	3086	4	22	-4	22	0	multi-exon	FALSE	canonical	3	22	junction_3	51.6161042914149	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTTATCTACCTCTTTT	-1	True	NA	-7	True	ATTAAA	-24	NA	49936468	49912701	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_49915161_49921477_49921581_49927918_49928086_49936129
H1_mix_00023292	chr13	-	1770	5	FSM	ENSG00000231607.14	ENST00000458725.7	1806	5	39	-3	3	3	multi-exon	FALSE	canonical	3	35	junction_2	6.57647321898295	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGAAGCTTATTAATCTT	-14	True	NA	NA	False	AATAAA	-19	NA	50082014	50043431	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_50044769_50049583_50049663_50068096_50068164_50075558_50075654_50081822
H1_mix_00023294	chr13	-	354	1	FSM	ENSG00000223676.1	ENST00000445636.1	354	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATGAAACTTATTAACAA	33	False	NA	NA	False	NA	NA	NA	50361763	50361409	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_50361400_50361800
H1_mix_00023295	chr13	-	1660	2	FSM	ENSG00000186047.11	ENST00000504404.2	1121	2	-283	-256	-36	256	multi-exon	FALSE	canonical	3	40	junction_1	0	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAAAGTCTCATGTGGAA	NA	False	NA	NA	False	AATACA	-12	NA	50843975	50822648	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_50823521_50843187
H1_mix_00023296	chr13	-	3011	4	FSM	ENSG00000226792.8	ENST00000563710.7	3075	4	65	-1	65	1	multi-exon	FALSE	canonical	3	13	junction_3	38.3869190682914	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTTGACAGATTCTTTT	NA	False	NA	0	True	AATAAA	-21	NA	51111209	51082117	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_51084326_51085318_51085560_51087927_51088076_51110795
H1_mix_00023298	chr13	-	2838	5	NNC	ENSG00000226792.8	novel	800	5	NA	NA	14	1	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	33.7120156620751	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTTGACAGATTCTTTT	976	False	NA	0	True	AATAAA	-21	NA	51172374	51082117	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_51084326_51085318_51085560_51087927_51088076_51113103_51113223_51172252
H1_mix_00023299	chr13	-	1791	2	Intergenic	novelGene_367	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	1207	junction_1	0	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTATTCTTTCCTTGTGG	NA	False	NA	NA	False	NA	NA	NA	51176077	51169596	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_-_51170108_51174797
H1_mix_00023301	chr13	-	6488	2	Genic_Genomic	ENSG00000226792.8	novel	800	5	NA	NA	-3738	-85473	multi-exon	TRUE	canonical	2	290	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTATTCTTTCCTTGTGG	NA	False	NA	NA	False	NA	NA	NA	51176126	51169596	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr13_-_51170957_51170998
H1_mix_00023302	chr13	-	9502	1	Genic_Genomic	ENSG00000226792.8	novel	NA	NA	NA	NA	-6710	-85473	mono-exon	FALSE	NA	NA	NA	NA	NA	556	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTATTCTTTCCTTGTGG	NA	False	NA	NA	False	NA	NA	NA	51179098	51169596	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr13_-_51169600_51179100
H1_mix_00023303	chr13	-	7350	18	FSM	ENSG00000102786.15	ENST00000311234.9	7350	18	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_14	23.2367088176919	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCAGAATTATTTTTATG	-2	True	NA	-7	True	AATAAA	-18	NA	51453036	51361576	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_51365846_51367804_51367899_51368938_51369311_51374207_51374440_51374653_51374797_51376047_51376175_51378238_51378455_51379461_51379573_51382028_51382124_51383328_51383462_51383588_51383742_51387385_51387541_51389318_51389445_51395299_51395484_51430293_51430384_51451024_51451175_51451977_51452056_51452414
H1_mix_00023304	chr13	-	2982	15	FSM	ENSG00000102786.15	ENST00000497989.5	3022	15	40	0	40	0	multi-exon	FALSE	canonical	2	6	junction_14	54.2714266912345	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTGTGTGGTTTAGGAA	NA	False	NA	-7	True	AATAAA	-12	NA	51421334	51365227	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_51365846_51367804_51367899_51368938_51369311_51374207_51374440_51374653_51374797_51376047_51376175_51378238_51378455_51379461_51379573_51382028_51382124_51383328_51383462_51383588_51383742_51387385_51387541_51389318_51389445_51395299_51395484_51421111
H1_mix_00023307	chr13	-	14764	3	FSM	ENSG00000102786.15	ENST00000442263.4	15428	3	0	664	0	-664	multi-exon	FALSE	canonical	3	224	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAATTTTCCCAAGTTA	19	False	NA	NA	False	TTTAAA	-42	NA	51453015	51437089	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_51451175_51451977_51452056_51452414
H1_mix_00023308	chr13	-	1972	8	FSM	ENSG00000102796.12	ENST00000218981.5	1970	8	0	-2	0	0	multi-exon	FALSE	canonical	3	48	junction_6	26.8586625709852	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGCAGCAGGTTCTTTT	5	True	NA	-10	True	AATAAA	-34	NA	51804157	51767992	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_51769294_51771820_51771912_51773929_51774035_51777059_51777122_51790010_51790093_51791164_51791258_51799533_51799668_51804053
H1_mix_00023310	chr13	-	1200	10	FSM	ENSG00000102796.12	ENST00000682342.1	1199	10	1	-2	1	0	multi-exon	FALSE	canonical	3	46	junction_1	24.5195814920078	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGCAGCAGGTTCTTTT	1	True	NA	-10	True	AATAAA	-34	NA	51804161	51767992	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_51768297_51769155_51769294_51771820_51771912_51773929_51774035_51777059_51777122_51790010_51790093_51791164_51791258_51797825_51797909_51799533_51799668_51804053
H1_mix_00023311	chr13	-	1324	8	FSM	ENSG00000102796.12	ENST00000280056.6	1324	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	35.9262282678132	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAATAGTACATGCCTCAT	20	True	NA	-9	True	ATTAAA	-17	NA	51804098	51770783	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_51771496_51771820_51771912_51773929_51774035_51777059_51777122_51790010_51790093_51791164_51791258_51799533_51799668_51804053
H1_mix_00023312	chr13	-	2829	7	NIC	ENSG00000102796.12	novel	671	7	NA	NA	0	-1	intron_retention	FALSE	canonical	3	20	junction_1	36.0589794642056	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGAATAGTACATGCCTCA	5	True	NA	-10	True	ATTAAA	-16	NA	51804157	51770784	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_51773034_51773929_51774035_51777059_51777122_51790010_51790093_51791164_51791258_51799533_51799668_51804053
H1_mix_00023313	chr13	-	7272	21	FSM	ENSG00000123191.16	ENST00000242839.10	6598	21	-674	0	1	0	multi-exon	FALSE	canonical	2	10	junction_14	7.92085853932514	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCTGTGAGTGAGATGC	4	True	NA	0	True	AATAAA	-23	NA	52012124	51932668	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_51935030_51935592_51935696_51937275_51937394_51937475_51937680_51939050_51939194_51941080_51941225_51942385_51942555_51944108_51944292_51946283_51946479_51949661_51949797_51950006_51950162_51950271_51950400_51957515_51957608_51958310_51958545_51960147_51960323_51961836_51961914_51964871_51965034_51968443_51968608_51970491_51970750_51973934_51975169_52011286
H1_mix_00023315	chr13	-	3264	14	FSM	ENSG00000136098.17	ENST00000617054.1	3256	14	0	-8	0	0	multi-exon	FALSE	canonical	3	34	junction_5	35.9229945642278	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGTGTGCAGTTTTTCA	2371	False	NA	-3	True	ATTAAA	-20	NA	52157485	52132642	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_52133227_52133688_52133816_52135728_52135864_52136115_52136260_52136799_52136903_52143914_52143988_52144690_52144892_52148414_52148470_52151145_52151233_52151324_52151393_52152608_52152693_52153894_52153993_52154079_52154174_52156074
H1_mix_00023317	chr13	-	4336	16	FSM	ENSG00000136098.17	ENST00000618534.4	2414	16	-15	-1907	0	1902	multi-exon	FALSE	canonical	2	7	junction_15	42.1792998203305	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGAATGGCTTATGGGGT	-10	True	NA	NA	False	AATAAA	-12	NA	52159550	52130736	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_52133227_52133688_52133816_52135728_52135864_52136115_52136260_52136799_52136903_52141019_52141070_52143914_52143988_52144690_52144892_52148414_52148470_52151145_52151233_52151324_52151393_52152608_52152693_52153894_52153993_52154079_52154174_52156074_52156249_52159197
H1_mix_00023318	chr13	-	2132	16	FSM	ENSG00000136098.17	ENST00000610828.5	2128	16	0	-4	0	0	multi-exon	FALSE	canonical	3	95	junction_6	25.9883734688332	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGTGTGCAGTTTTTCA	-5	True	NA	-3	True	ATTAAA	-20	NA	52159597	52132642	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_52133227_52133688_52133816_52135728_52135864_52136115_52136260_52136799_52136903_52141019_52141070_52143914_52143988_52144690_52144892_52148414_52148470_52151145_52151233_52151324_52151393_52152608_52152693_52153894_52153993_52154079_52154174_52156074_52156249_52159542
H1_mix_00023319	chr13	-	2423	15	FSM	ENSG00000136098.17	ENST00000611833.4	2345	15	-72	-6	-72	2	multi-exon	FALSE	non_canonical	0	0	junction_5	43.661733116947	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCAGTTTTTCAATATGA	NA	False	NA	3	True	ATTAAA	-26	NA	52159933	52132636	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_52133227_52133688_52133816_52135728_52135864_52136115_52136260_52136799_52136903_52143915_52143988_52144690_52144892_52148414_52148470_52151145_52151233_52151324_52151393_52152608_52152693_52153894_52153993_52154079_52154174_52156074_52156249_52159542
H1_mix_00023320	chr13	-	2504	16	NIC	ENSG00000136098.17	novel	2128	16	NA	NA	-109	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_6	43.060887125093	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGTGTGCAGTTTTTCA	NA	False	NA	-3	True	ATTAAA	-20	NA	52159970	52132642	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_52133227_52133688_52133816_52135728_52135864_52136115_52136260_52136799_52136903_52141019_52141070_52143915_52143988_52144690_52144892_52148414_52148470_52151145_52151233_52151324_52151393_52152608_52152693_52153894_52153993_52154079_52154174_52156074_52156249_52159542
H1_mix_00023321	chr13	-	2340	16	NNC	ENSG00000136098.17	novel	2128	16	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_15	39.347793951998	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTAATGTGTGCAGTTT	31	True	NA	-7	True	ATTAAA	-16	NA	52159561	52132646	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_52133227_52133688_52133816_52135728_52135864_52136115_52136260_52136799_52136903_52141019_52141070_52143914_52143988_52144690_52144892_52148414_52148470_52151145_52151233_52151324_52151393_52152608_52152693_52153894_52153993_52154079_52154174_52156074_52156249_52159294
H1_mix_00023324	chr13	-	2806	9	NIC	ENSG00000243406.6	novel	3494	9	NA	NA	-27	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_2	8.35071104756954	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTTGGTCTGTCATGT	NA	False	NA	-4	True	AATAAA	-18	NA	52194492	52167708	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_52169305_52169986_52170100_52171157_52171249_52175638_52175777_52180581_52180655_52183975_52184115_52186682_52186824_52189638_52189915_52194253
H1_mix_00023326	chr13	-	3465	2	FSM	ENSG00000136100.14	ENST00000462289.1	544	2	0	-2921	0	-2	multi-exon	FALSE	canonical	3	224	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGTGTGAGCAGTTTT	NA	False	NA	-2	True	AATAAA	-26	NA	52416161	52412603	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_52415924_52416016
H1_mix_00023328	chr13	-	4427	14	FSM	ENSG00000136100.14	ENST00000378060.9	4425	14	0	-2	0	-2	multi-exon	TRUE	canonical	3	160	junction_8	28.2641806059444	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGTGTGAGCAGTTTT	-2	True	NA	-2	True	AATAAA	-26	NA	52450634	52412603	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_52415924_52416016_52416094_52417056_52417142_52417991_52418057_52423573_52423640_52425931_52426067_52426988_52427067_52427186_52427220_52433661_52433749_52434792_52434883_52436289_52436405_52439097_52439169_52442376_52442446_52450498
H1_mix_00023330	chr13	-	1077	1	FSM	ENSG00000273723.1	ENST00000620372.1	975	1	-91	-11	-91	11	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTCATAACATCAGGAGGA	NA	False	NA	90	True	AATAAA	-27	NA	52652370	52651293	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_52651300_52652400
H1_mix_00023331	chr13	-	1444	7	FSM	ENSG00000136110.13	ENST00000448904.6	1444	7	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	400.800206531328	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAATTGTACACTTGAGC	-13	True	NA	-10	True	AATAAA	-27	NA	52739812	52703263	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_52703808_52708535_52708703_52712715_52712870_52723996_52724111_52733218_52733360_52739030_52739172_52739629
H1_mix_00023332	chr13	-	1455	7	FSM	ENSG00000136110.13	ENST00000377962.8	1455	7	0	0	0	0	multi-exon	FALSE	canonical	3	1021	junction_4	138.169481274106	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAATTGTACACTTGAGC	-21	True	NA	-10	True	AATAAA	-27	NA	52739820	52703263	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_52703811_52708535_52708703_52712715_52712870_52723996_52724111_52733218_52733360_52739030_52739172_52739629
H1_mix_00023334	chr13	-	4684	3	FSM	ENSG00000136099.13	ENST00000377942.7	5088	3	0	404	0	-404	multi-exon	FALSE	canonical	3	8	junction_2	2	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGAGGTAGGGAAATTT	-2	True	NA	NA	False	NA	NA	NA	52848640	52843292	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_52844934_52845424_52845633_52845805
H1_mix_00023335	chr13	-	3707	3	FSM	ENSG00000136099.13	ENST00000338862.5	3708	3	1	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	4.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATCTGCCAATTGCTTT	-2	True	NA	-3	True	AATAAA	-19	NA	52848640	52843978	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_52844934_52845424_52845633_52846096
H1_mix_00023336	chr13	-	2143	5	NNC	ENSG00000234787.8	novel	1020	3	NA	NA	1	6893	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_1	725.511199086548	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCACTGGTGTATGGAATT	103	False	NA	-4	True	AATAAA	-29	NA	54132850	54108889	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_54110330_54110894_54111012_54127279_54127430_54130873_54131072_54132612
H1_mix_00023338	chr13	-	1014	4	NIC	ENSG00000234787.8	novel	1060	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	372	junction_1	571.356864548477	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGTGGCCTCTGCTCTGA	102	False	NA	-3	True	CATAAA	-23	NA	54132851	54115782	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_54116210_54127279_54127430_54130873_54131072_54132612
H1_mix_00023339	chr13	-	815	3	NIC	ENSG00000234787.8	novel	1060	5	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	298	junction_2	37	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGTGGCCTCTGCTCTGA	103	False	NA	-3	True	CATAAA	-23	NA	54132850	54115782	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_54116210_54127279_54127430_54132612
H1_mix_00023340	chr13	-	2549	3	NIC	ENSG00000234787.8	novel	1060	5	NA	NA	1	-5	intron_retention	FALSE	canonical	3	372	junction_1	603.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAATGGCGTGGCCTCTGC	103	False	NA	-8	True	CATAAA	-18	NA	54132850	54115787	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_54116210_54127279_54127430_54130873
H1_mix_00023341	chr13	-	921	4	NIC	ENSG00000234787.8	novel	1060	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	185.835650209772	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGTGGCCTCTGCTCTGA	102	False	NA	-3	True	CATAAA	-23	NA	54132851	54115782	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_54116210_54120939_54121045_54127279_54127430_54132612
H1_mix_00023343	chr13	-	1030	4	FSM	ENSG00000234787.8	ENST00000427299.6	1030	4	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_1	643.008726396635	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTCAGGTTCTCTTTG	1	True	NA	-5	True	ATTAAA	-18	NA	54132862	54124323	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_54124756_54127279_54127430_54130873_54131072_54132612
H1_mix_00023344	chr13	-	833	4	FSM	ENSG00000234787.8	ENST00000606706.5	833	4	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	619.910387789146	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTAGGTTTGTTTATAC	134	False	NA	NA	False	NA	NA	NA	54132819	54124994	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_54125273_54127279_54127430_54130873_54131072_54132612
H1_mix_00023345	chr13	-	1020	3	FSM	ENSG00000234787.8	ENST00000451744.1	1020	3	0	0	0	0	multi-exon	FALSE	canonical	3	1579	junction_1	5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGGTGTTTTAGAGTT	87	False	NA	NA	False	AATAAA	-26	NA	54132866	54126861	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_54127430_54130873_54131072_54132612
H1_mix_00023346	chr13	-	1174	2	Intergenic	novelGene_372	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGGCTAATGTCTGTCC	NA	False	NA	NA	False	NA	NA	NA	54268419	54244595	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_-_54245489_54268138
H1_mix_00023347	chr13	-	677	2	Genic_Genomic	ENSG00000136149.6	novel	612	1	NA	NA	0	5871	multi-exon	FALSE	non_canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATGTTTTATAAGCACAG	14	False	NA	NA	False	NA	NA	NA	54441315	54434832	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr13_-_54434856_54440661
H1_mix_00023350	chr13	-	13506	1	Genic_Genomic	ENSG00000274090.1	novel	NA	NA	NA	NA	-216	-34538	mono-exon	FALSE	NA	NA	NA	NA	NA	589	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACATTGAGATTGAAATTT	NA	False	NA	-60	True	AATAAA	-21	NA	55583740	55570234	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr13_-_55570200_55583700
H1_mix_00023351	chr13	-	463	2	Intergenic	novelGene_379	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	4	junction_1	0	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTGTTTGGTGGTCTCT	2262	False	NA	-3	True	AATAAA	-20	NA	55658195	55654968	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_-_55655393_55658156
H1_mix_00023352	chr13	-	221	1	Intergenic	novelGene_381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCCATTCACACTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	56040630	56040409	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_-_56040400_56040600
H1_mix_00023353	chr13	-	4745	28	NNC	ENSG00000139734.19	novel	4745	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	104	junction_27	20.7373013021204	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTCTTTTGTCTCTCTT	-9	True	NA	NA	False	AATAAA	-29	NA	60163928	59665582	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_59666847_59774188_59774249_59774727_59774824_59810787_59810924_59833106_59833271_59839322_59839449_59861406_59861537_59879228_59879469_59911734_59911837_59916154_59916250_59924774_59924871_59969943_59970059_59970851_59971161_59974351_59974457_59980794_59980860_59983768_59983888_59991157_59991275_59992067_59992187_59992472_59992584_60008543_60008650_60010532_60010670_60015912_60015983_60016070_60016146_60042689_60042821_60093627_60093733_60112009_60112187_60132956_60132990_60163586
H1_mix_00023354	chr13	-	4745	28	FSM	ENSG00000139734.19	ENST00000400324.9	4745	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	36.0384263749541	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTCTTTTGTCTCTCTT	-9	True	NA	NA	False	AATAAA	-29	NA	60163928	59665582	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_59666847_59774188_59774249_59774727_59774824_59810787_59810924_59833106_59833272_59839323_59839449_59861406_59861537_59879228_59879469_59911734_59911837_59916154_59916250_59924774_59924871_59969943_59970059_59970851_59971161_59974351_59974457_59980794_59980860_59983768_59983888_59991157_59991275_59992067_59992187_59992472_59992584_60008543_60008650_60010532_60010670_60015912_60015983_60016070_60016146_60042689_60042821_60093627_60093733_60112009_60112187_60132956_60132990_60163586
H1_mix_00023356	chr13	-	3458	27	FSM	ENSG00000139734.19	ENST00000267215.8	3449	27	0	-9	0	9	multi-exon	FALSE	canonical	0	0	junction_4	36.6760163801195	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGATTGCGTACTCGTA	4	True	NA	NA	False	AGTAAA	-24	NA	60163766	59774049	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_59774249_59774727_59774824_59810787_59810924_59833106_59833272_59839323_59839449_59861406_59861537_59879228_59879469_59911734_59911837_59916154_59916250_59924774_59924871_59969943_59970059_59970851_59971161_59974351_59974457_59980794_59980860_59983768_59983888_59991157_59991275_59992067_59992187_59992472_59992584_60008543_60008650_60010532_60010670_60015912_60015983_60016070_60016146_60042689_60042821_60093627_60093733_60112009_60112187_60132956_60132990_60163586
H1_mix_00023357	chr13	-	268	2	Antisense	novelGene_ENSG00000227510.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGATTTTCTTCATAACA	100	False	NA	NA	False	AATAAA	-30	NA	61090777	60930563	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr13_-_60930807_61090752
H1_mix_00023359	chr13	-	5140	2	FSM	ENSG00000280165.1	ENST00000409204.4	4778	2	360	-722	360	722	multi-exon	FALSE	canonical	3	31	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTGTGGCAGGATTTCC	12	True	NA	-1	True	AATAAA	-20	NA	61415162	61408962	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_61413967_61415026
H1_mix_00023360	chr13	-	318	1	FSM	ENSG00000236565.3	ENST00000455201.1	833	1	560	-45	560	45	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTGTCAGGAAAGCTGCA	NA	False	NA	NA	False	AAAACA	-41	NA	65788204	65787886	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_65787900_65788200
H1_mix_00023361	chr13	-	2231	3	FSM	ENSG00000204899.6	ENST00000377818.4	2231	3	0	0	0	0	multi-exon	FALSE	canonical	3	584	junction_1	32.5	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCCTGTACTTTTGTTTT	-4	True	NA	-10	True	AATAAA	-16	NA	72727629	72708366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_72710346_72718951_72719098_72727523
H1_mix_00023362	chr13	-	10571	21	FSM	ENSG00000083520.15	ENST00000377767.9	10571	21	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_20	24.2373162705775	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGTTCTAATTGCAAACT	3	True	NA	-4	True	AATAAA	-17	NA	72781900	72752168	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_72759879_72760528_72760652_72761362_72761522_72761645_72761815_72761922_72762138_72763450_72763608_72765971_72766059_72768784_72768913_72770903_72770989_72771080_72771146_72771794_72771897_72772158_72772276_72772692_72772840_72773683_72773822_72773945_72774060_72775210_72775376_72775924_72776093_72777419_72777494_72778186_72778381_72780845_72781004_72781604
H1_mix_00023363	chr13	-	5232	21	FSM	ENSG00000083520.15	ENST00000377780.8	5232	21	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_19	56.7355928848902	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	234	False	72781945	NA	False	NA	NA	NA	72781925	72757442	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_72759879_72760528_72760652_72761362_72761522_72761645_72761815_72761922_72762138_72763450_72763608_72765971_72766059_72768784_72768913_72770903_72770989_72771080_72771146_72771794_72771897_72772158_72772276_72772692_72772840_72773683_72773822_72773945_72774060_72775210_72775376_72775924_72776093_72777419_72777494_72778186_72778381_72781288_72781357_72781604
H1_mix_00023365	chr13	-	431	1	FSM	ENSG00000236972.2	ENST00000423401.1	411	1	-61	41	-61	-41	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCGCCTGTACTCGGATC	-2	True	NA	NA	False	AAGAAA	-42	NA	73101046	73100615	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_73100600_73101000
H1_mix_00023367	chr13	-	7917	19	FSM	ENSG00000136111.14	ENST00000377625.6	6182	19	-560	-1175	-505	13	multi-exon	FALSE	canonical	3	92	junction_18	11.960841458487	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAACTTTAGGACTAACACT	NA	False	NA	NA	False	AATAAA	-20	NA	75482674	75283489	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_75287026_75288933_75289111_75292101_75292272_75294853_75295014_75299329_75299575_75302242_75302402_75306312_75306472_75309941_75310152_75312737_75312899_75326196_75326424_75327751_75327827_75336920_75337041_75341124_75341236_75341495_75341588_75349169_75349303_75356146_75356252_75359768_75359859_75362025_75362608_75481269
H1_mix_00023368	chr13	-	1798	4	FSM	ENSG00000188243.14	ENST00000682242.1	1669	4	-50	-79	-47	79	multi-exon	FALSE	canonical	3	1994	junction_2	63.5207752541551	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCAGATCACTTGAGGCC	NA	False	NA	NA	False	NA	NA	NA	75537891	75525134	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_75526640_75530113_75530267_75537663_75537676_75537763
H1_mix_00023369	chr13	-	594	3	FSM	ENSG00000188243.14	ENST00000377619.9	594	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	1040	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTAGTGGTGATGAATG	214	False	NA	-21	True	AATAAA	-18	NA	75537618	75526435	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_75526640_75530113_75530267_75537381
H1_mix_00023370	chr13	-	714	4	NIC	ENSG00000188243.14	novel	486	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_2	957.603606231026	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTAGTGGTGATGAATG	6	True	NA	-21	True	AATAAA	-18	NA	75537826	75526435	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_75526640_75530113_75530267_75537381_75537676_75537763
H1_mix_00023372	chr13	-	486	5	FSM	ENSG00000188243.14	ENST00000355801.4	486	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	998.670240870328	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTAGTGGTGATGAATG	-9	True	NA	-21	True	AATAAA	-18	NA	75537841	75526435	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_75526640_75527812_75527852_75530113_75530267_75537663_75537676_75537763
H1_mix_00023373	chr13	-	442	4	FSM	ENSG00000188243.14	ENST00000497707.5	392	4	-50	0	-47	0	multi-exon	FALSE	canonical	3	15	junction_2	949.051105051778	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTAGTGGTGATGAATG	NA	False	NA	-21	True	AATAAA	-18	NA	75537891	75526435	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_75526640_75530310_75530409_75537663_75537676_75537763
H1_mix_00023374	chr13	-	6237	1	FSM	ENSG00000178695.6	ENST00000377474.4	6231	1	0	-6	0	6	mono-exon	FALSE	NA	NA	NA	NA	NA	961	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGGCTCCTTGGCATGG	0	True	NA	0	True	AATAAA	-23	NA	76886405	76880168	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_76880200_76886400
H1_mix_00023375	chr13	-	3517	5	FSM	ENSG00000005812.11	ENST00000355619.10	3506	5	0	-11	0	11	multi-exon	FALSE	canonical	3	71	junction_4	15.6424902109607	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTTTAAAAACTACACAAA	1	True	NA	1	True	AATAAA	-26	NA	77027159	77005248	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_77007789_77015408_77015581_77018599_77018723_77021512_77021862_77026826
H1_mix_00023376	chr13	-	3543	20	ISM	ENSG00000005810.19	ENST00000429715.1	3660	22	5446	0	5446	0	3prime_fragment	FALSE	canonical	3	13	junction_15	14.4971102288059	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGTGTTAGGACAGCATA	NA	False	NA	NA	False	TTTAAA	-12	NA	77082068	77044901	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr13_-_77045494_77050996_77051163_77051810_77051919_77055557_77055768_77056985_77057094_77058217_77058407_77059522_77059627_77061168_77061302_77061661_77061791_77062595_77062698_77064614_77064735_77065991_77066089_77067580_77067865_77068564_77068832_77070630_77070712_77076759_77076850_77077147_77077388_77078823_77078890_77081426_77081652_77081836
H1_mix_00023377	chr13	-	4458	8	FSM	ENSG00000136160.17	ENST00000377211.8	4471	8	9	4	9	2	multi-exon	FALSE	canonical	3	63	junction_7	125.107300884856	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTGGACTGTGTGTTTC	NA	False	NA	-4	True	ATTAAA	-20	NA	77919759	77895484	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_77898335_77899858_77899968_77900520_77900655_77901057_77901208_77903155_77903361_77903494_77903608_77918090_77918625_77919396
H1_mix_00023378	chr13	-	4300	7	FSM	ENSG00000136160.17	ENST00000646607.2	4300	7	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_6	100.500414592843	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGCTGGACTGTGTGTT	-2	True	NA	-6	True	ATTAAA	-18	NA	77918831	77895486	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_77898335_77899858_77899968_77900520_77900655_77901057_77901208_77903155_77903361_77903494_77903608_77918090
H1_mix_00023380	chr13	-	3507	6	FSM	ENSG00000152193.8	ENST00000282003.7	3507	6	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	28.2460616723819	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTGATGTCGATGATGA	-6	True	NA	-8	True	AATAAA	-20	NA	78659155	78614288	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_78617123_78635109_78635199_78638822_78639072_78642121_78642214_78644861_78644998_78659048
H1_mix_00023383	chr13	-	7702	23	NNC	ENSG00000139746.16	novel	5258	22	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_2	46.4869349814219	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTAACGTTTTAAAATTG	13	True	NA	-13	True	AATAAA	-18	NA	79406211	79311825	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_79314994_79318820_79318880_79319534_79320711_79322348_79322463_79334343_79334431_79337101_79337303_79341122_79341228_79342663_79342832_79344247_79344323_79344668_79344795_79354438_79354571_79355219_79355385_79358273_79358434_79359574_79359687_79365577_79365719_79366054_79366196_79366632_79366873_79368729_79368991_79370944_79371163_79371841_79371931_79377378_79377516_79378788_79378908_79405703
H1_mix_00023384	chr13	-	5152	21	FSM	ENSG00000139746.16	ENST00000438724.5	5152	21	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_14	27.5326624212044	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCAAATTGGCAGAGGCT	3	True	NA	NA	False	NA	NA	NA	79406221	79318867	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_79320711_79322348_79322463_79334343_79334431_79337101_79337303_79341122_79341228_79342663_79342832_79344247_79344323_79344668_79344795_79354438_79354571_79355219_79355385_79358273_79358434_79359574_79359687_79365577_79365719_79366054_79366196_79366632_79366873_79368729_79368991_79370944_79371163_79371841_79371931_79377378_79377516_79378788_79378908_79405703
H1_mix_00023386	chr13	-	5258	22	FSM	ENSG00000139746.16	ENST00000438737.3	5258	22	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_9	48.2713888771287	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCAAATTGGCAGAGGCT	-31	True	NA	NA	False	NA	NA	NA	79406255	79318867	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_79320711_79322348_79322463_79334343_79334431_79337101_79337303_79341122_79341228_79342663_79342832_79344247_79344323_79344668_79344795_79353152_79353225_79354438_79354571_79355219_79355385_79358273_79358434_79359574_79359687_79365577_79365719_79366054_79366196_79366632_79366873_79368729_79368991_79370944_79371163_79371841_79371931_79377378_79377516_79378788_79378908_79405703
H1_mix_00023387	chr13	-	4014	21	NIC	ENSG00000139746.16	novel	5230	22	NA	NA	44	-14	combination_of_known_junctions	FALSE	canonical	3	21	junction_13	45.4784564381862	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	47	False	NA	NA	False	AAAAAG	-28	NA	79406177	79319967	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_79320711_79322348_79322463_79334343_79334431_79337101_79337303_79341122_79341228_79342663_79342832_79344247_79344323_79344668_79344795_79354438_79354562_79355219_79355385_79358273_79358434_79359574_79359687_79365577_79365734_79366054_79366196_79366632_79366873_79368729_79368991_79370944_79371163_79371841_79371931_79377378_79377516_79378788_79378908_79405703
H1_mix_00023389	chr13	-	2286	2	FSM	ENSG00000136158.12	ENST00000377104.4	2286	2	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	0	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGCTGTTTTGTCTTCTT	2	True	NA	-22	True	ATTAAA	-1	NA	80341126	80335975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_80337757_80340621
H1_mix_00023391	chr13	-	229	2	Antisense	novelGene_ENSG00000229443.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	27	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGACCATCACGGACGCCGA	NA	False	NA	NA	False	NA	NA	NA	88518260	88516053	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr13_-_88516167_88518144
H1_mix_00023392	chr13	-	419	2	FSM	ENSG00000229557.1	ENST00000427717.1	431	2	0	12	0	-12	multi-exon	FALSE	canonical	3	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTAAATGCTTTTTGAG	NA	False	NA	-20	True	AATAAA	-44	NA	91131407	91127624	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_91127859_91131222
H1_mix_00023393	chr13	-	236	1	FSM	ENSG00000282993.1	ENST00000634391.1	234	1	19	-21	19	21	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCGACAGAGCGAGACTC	NA	False	NA	NA	False	NA	NA	NA	92659208	92658972	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_92659000_92659200
H1_mix_00023394	chr13	-	1799	12	FSM	ENSG00000088451.11	ENST00000261296.7	1797	12	0	-2	0	2	multi-exon	FALSE	canonical	3	94	junction_6	16.5848681405572	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTAATCCTTCTTTGCCC	14	True	NA	NA	False	AATAAA	-19	NA	94596152	94574051	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_94574853_94576313_94576412_94577370_94577430_94578004_94578171_94578729_94578774_94579893_94579954_94581090_94581190_94583093_94583237_94590852_94590944_94592240_94592310_94593840_94593908_94596050
H1_mix_00023396	chr13	-	703	7	NIC	ENSG00000088451.11	novel	1797	12	NA	NA	-29	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_4	38.4042821686448	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTTATTATTACCTTTT	-1	True	NA	NA	False	NA	NA	NA	94596271	94578729	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_94578774_94579893_94579954_94581090_94581190_94583093_94583237_94592240_94592310_94593840_94593908_94596050
H1_mix_00023397	chr13	-	292	1	FSM	ENSG00000274168.1	ENST00000470538.3	280	1	-207	195	-207	-195	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGCCTGCAATAAGTTCA	8795	False	NA	NA	False	NA	NA	NA	94699709	94699417	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_94699400_94699700
H1_mix_00023398	chr13	-	2927	1	FSM	ENSG00000125285.6	ENST00000376945.4	2924	1	0	-3	0	3	mono-exon	FALSE	NA	NA	NA	NA	NA	540	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTTCTTGTTGAGTTCC	-4	True	NA	NA	False	AATAAA	-27	NA	94712545	94709618	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_94709600_94712500
H1_mix_00023400	chr13	-	3059	22	FSM	ENSG00000125257.16	ENST00000643556.1	3059	22	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_21	67.8279135042509	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCATAAACATACTTATCA	507	False	NA	-48	True	NA	NA	NA	95301302	95095796	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_95096180_95115921_95116002_95161188_95161336_95163121_95163217_95163609_95163648_95164377_95164519_95166157_95166368_95170531_95170629_95177706_95177794_95177996_95178092_95186700_95186893_95188452_95188543_95194835_95194938_95206531_95206782_95207799_95207926_95209433_95209598_95210691_95210782_95234609_95234835_95246974_95247096_95247642_95247754_95266111_95266265_95301240
H1_mix_00023401	chr13	-	2985	21	FSM	ENSG00000125257.16	ENST00000629385.1	2903	21	36	-118	0	-29	multi-exon	FALSE	canonical	3	32	junction_1	43.5349285057412	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATCTTTTTAGCCCTGTA	38	True	NA	-77	True	NA	NA	NA	95301410	95095825	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_95096180_95115921_95116002_95161188_95161336_95163121_95163217_95163609_95163648_95164377_95164519_95166157_95166368_95170531_95170629_95177706_95177794_95177996_95178092_95186700_95186893_95188452_95188543_95194835_95194938_95206531_95206782_95207799_95207926_95209433_95209598_95210691_95210782_95234609_95234835_95246974_95247096_95247642_95247754_95301240
H1_mix_00023402	chr13	-	5302	9	NNC	ENSG00000134874.18	novel	7011	20	NA	NA	-15203	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	37.0149885181665	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTCTTCAGAAAGGTACT	NA	False	NA	-18	True	CATAAA	-5	NA	95603336	95581969	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_95582314_95584735_95584911_95586005_95586137_95587538_95587730_95589153_95589208_95589802_95589933_95590278_95590442_95593943_95594088_95599366
H1_mix_00023403	chr13	-	7480	23	FSM	ENSG00000134874.18	ENST00000376829.7	7491	23	11	0	-5	0	multi-exon	FALSE	canonical	3	35	junction_18	28.7429833334866	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAACAGAAAATGATTAGTAT	11	False	NA	NA	False	AATAAA	-25	NA	95644695	95578201	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_95582314_95584735_95584911_95586005_95586137_95587538_95587730_95589153_95589208_95589802_95589933_95590278_95590442_95593943_95594087_95599364_95599425_95606002_95606060_95609456_95609514_95611444_95611494_95612036_95612178_95619884_95619948_95622342_95622481_95624767_95624930_95629988_95630114_95633233_95633322_95641294_95641856_95641993_95642242_95643042_95643258_95643600_95643699_95644376
H1_mix_00023404	chr13	-	577	3	FSM	ENSG00000134874.18	ENST00000479518.1	600	3	0	23	0	-23	multi-exon	FALSE	canonical	3	100	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAGGATTGGATATGCA	218	False	NA	89	True	AAAAAG	-27	NA	95587674	95584600	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_95584911_95586005_95586137_95587538
H1_mix_00023405	chr13	-	1580	6	FSM	ENSG00000134874.18	ENST00000466027.1	1580	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	15.4996774159981	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGAGGGTGGCCTAAAGT	40	False	NA	NA	False	AGTAAA	-15	NA	95644666	95637008	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_95637177_95641294_95641856_95641993_95642242_95643042_95643258_95643600_95643699_95644376
H1_mix_00023406	chr13	-	2909	2	FSM	ENSG00000247400.5	ENST00000671463.2	2927	2	18	0	-10	0	multi-exon	FALSE	canonical	3	11	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAATCTAGTAAAATATCTA	215	False	NA	NA	False	TTTAAA	-44	NA	95676955	95672863	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_95674669_95675851
H1_mix_00023407	chr13	-	4850	39	FSM	ENSG00000102595.21	ENST00000376747.8	4850	39	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_20	44.4943271929644	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGATTGTTCCTTTTTCCT	-5	True	NA	-4	True	AATAAA	-21	NA	96053401	95801579	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_95801813_95832926_95833054_95837085_95837203_95853542_95853658_95854314_95854476_95856157_95856341_95859590_95859676_95860787_95860884_95863628_95863715_95867338_95867424_95877278_95877365_95877697_95877857_95884490_95884681_95887891_95887972_95890861_95890965_95894561_95894658_95895179_95895305_95900806_95900939_95902853_95903061_95925679_95925775_95927027_95927127_95927212_95927337_95936923_95937089_95939956_95940092_95947036_95947173_95947995_95948082_95949334_95949455_95970111_95970263_95972579_95972672_95983803_95983865_95986332_95986433_95989972_95990074_95996062_95996136_95999210_95999308_96013306_96013482_96023039_96023153_96023628_96023760_96031888_96031972_96053154
H1_mix_00023408	chr13	-	4941	40	NNC	ENSG00000102595.21	novel	4850	39	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	11	junction_30	46.0332184320306	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGATTGTTCCTTTTTCCT	3	True	NA	-4	True	AATAAA	-21	NA	96053393	95801579	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_95801813_95832926_95833054_95837085_95837203_95853542_95853658_95854314_95854476_95856157_95856341_95859590_95859676_95860787_95860884_95863628_95863715_95867338_95867424_95877278_95877365_95877697_95877857_95884490_95884681_95887891_95887972_95890861_95890965_95894561_95894658_95895179_95895305_95900806_95900939_95902853_95903061_95925679_95925775_95927027_95927127_95927212_95927337_95936923_95937089_95939956_95940092_95947036_95947173_95947995_95948082_95949334_95949455_95970111_95970263_95972579_95972672_95983803_95983865_95985238_95985338_95986332_95986433_95989972_95990074_95996062_95996136_95999210_95999308_96013306_96013482_96023039_96023153_96023628_96023760_96031888_96031972_96053154
H1_mix_00023410	chr13	-	1553	10	FSM	ENSG00000102595.21	ENST00000397618.7	1547	10	0	-6	0	0	multi-exon	FALSE	canonical	3	82	junction_1	36.8443506231214	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAATTGTAATTTCTCA	-4	True	NA	-11	True	AATAAA	-22	NA	96053400	95984903	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_95985338_95986332_95986433_95989972_95990074_95996062_95996136_95999210_95999308_96013306_96013482_96023039_96023153_96023628_96023760_96031888_96031972_96053154
H1_mix_00023412	chr13	-	2240	8	FSM	ENSG00000102595.21	ENST00000376712.4	2240	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	64.0707517084808	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATATGCTGTTTGTATA	3	True	NA	NA	False	NA	NA	NA	96053393	95990144	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_95991474_95996062_95996136_95999210_95999308_96013306_96013482_96023039_96023153_96023628_96023760_96031888_96031972_96053154
H1_mix_00023413	chr13	-	9598	11	FSM	ENSG00000102572.15	ENST00000539966.6	9605	11	0	7	0	-7	multi-exon	TRUE	canonical	3	576	junction_4	70.9146670301708	204	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCGAGTCTGCCTCATTC	-1	True	NA	NA	False	AATAAA	-10	NA	98577107	98445191	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_98453210_98457167_98457305_98460371_98460441_98461773_98461898_98463690_98463837_98466375_98466562_98474820_98474979_98475249_98475359_98482264_98482322_98519242_98519474_98576744
H1_mix_00023418	chr13	-	1437	5	FSM	ENSG00000088386.17	ENST00000376494.1	1621	5	118	66	118	-66	multi-exon	FALSE	canonical	3	12	junction_3	2.27760839478607	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAACAAGACCATCCTGTCC	2527	False	NA	NA	False	NA	NA	NA	98726449	98720592	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_98721586_98721803_98721904_98723911_98724032_98726122_98726265_98726367
H1_mix_00023420	chr13	-	1169	9	FSM	ENSG00000088387.21	ENST00000419908.5	1169	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_7	18.7149672722129	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCCAGGCACAGCAGGC	NA	False	NA	NA	False	NA	NA	NA	98829455	98800287	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_98800479_98804998_98805210_98807660_98807808_98809351_98809466_98810168_98810292_98824397_98824505_98825871_98825941_98826829_98826888_98829306
H1_mix_00023422	chr13	-	4176	33	FSM	ENSG00000088387.21	ENST00000427887.2	4176	33	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_15	10.8310444296707	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTCAGGATCATACAGTT	-6	True	NA	NA	False	AATAAA	-19	NA	99086625	98860202	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_98860523_98863018_98863133_98863369_98863549_98867424_98867537_98867927_98868012_98868230_98868378_98879897_98879970_98880546_98880673_98881557_98881628_98881891_98882008_98883041_98883132_98883812_98883900_98884970_98885093_98885707_98885832_98886531_98886625_98888157_98888224_98888359_98888548_98888631_98888712_98897487_98897611_98898178_98898262_98901777_98901901_98902287_98902492_98902971_98903113_98904631_98904707_98914327_98914396_98915328_98915504_98920953_98921089_98922050_98922147_98923301_98923372_98925836_98925920_98930167_98930258_98955434_98955552_99086222
H1_mix_00023424	chr13	-	1719	2	FSM	ENSG00000228889.8	ENST00000668873.1	1749	2	0	30	0	-30	multi-exon	FALSE	canonical	0	0	junction_1	0	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATAAAAAACAGGGAATGTG	NA	False	NA	-110	True	NA	NA	NA	99200717	99196471	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_99197803_99200329
H1_mix_00023425	chr13	-	264	1	FSM	ENSG00000218502.3	ENST00000394213.2	387	1	150	-27	150	27	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGACTCTAAATAAAAGAACA	251	False	NA	NA	False	NA	NA	NA	99215608	99215344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_99215300_99215600
H1_mix_00023427	chr13	-	5508	3	NNC	ENSG00000139800.9	novel	4497	2	NA	NA	-1040	19430	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	185	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGAAGCTGAGGTGGATC	8785	False	NA	NA	False	NA	NA	NA	99972807	99943533	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_99943560_99963018_99965820_99970126
H1_mix_00023428	chr13	-	5537	2	FSM	ENSG00000139800.9	ENST00000267294.5	4497	2	-1040	0	-1040	0	multi-exon	FALSE	canonical	3	370	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAATGTCTTCCCTTGGTC	8785	False	NA	40	True	AATAGA	-17	NA	99972807	99962963	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_99965820_99970126
H1_mix_00023429	chr13	-	3839	1	Genic_Genomic	ENSG00000288060.1	novel	NA	NA	NA	NA	-579	-3249	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGTAATACAATTTATGC	-15	True	NA	NA	False	AATAAA	-22	NA	99980613	99976774	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr13_-_99976800_99980600
H1_mix_00023431	chr13	-	1000	2	FSM	ENSG00000274605.3	ENST00000612598.2	1038	2	25	13	8	-13	multi-exon	FALSE	canonical	3	261	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTACACCATTGAGATTTGA	1	True	NA	-19	True	AATAAA	-12	NA	100088942	100086037	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_100086728_100088632
H1_mix_00023434	chr13	-	645	3	FSM	ENSG00000134864.11	ENST00000471912.1	393	3	-2	-250	-2	231	multi-exon	FALSE	canonical	3	9	junction_2	9.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCCACCGCGGTGCAGTGC	31	True	NA	NA	False	NA	NA	NA	100588733	100532263	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_100532602_100583824_100583998_100588599
H1_mix_00023435	chr13	-	458	1	FSM	ENSG00000234354.3	ENST00000427219.1	348	1	-25	-85	-25	85	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGGACCAGATGGCTTC	0	True	NA	NA	False	AATAAA	-34	NA	100540273	100539815	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_100539800_100540300
H1_mix_00023436	chr13	-	3913	19	FSM	ENSG00000125247.16	ENST00000342624.10	3911	19	0	-2	0	2	multi-exon	FALSE	canonical	3	88	junction_2	22.1289710114296	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTTTTTTTTTTTGAG	12	True	NA	0	True	AATAAA	-18	NA	100674795	100603622	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_100605143_100606357_100606428_100612397_100612511_100614315_100614431_100625534_100625677_100625784_100625893_100626070_100626151_100634804_100634937_100635023_100635196_100636531_100636735_100637537_100637703_100637929_100638023_100642210_100642312_100656380_100656469_100662963_100663181_100664220_100664337_100668578_100668795_100670359_100670570_100674743
H1_mix_00023437	chr13	-	3483	18	FSM	ENSG00000125247.16	ENST00000376234.7	3483	18	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_17	38.1190994639779	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATATTGCCTTCTTAAT	NA	False	NA	-4	True	AGTAAA	-26	NA	100674879	100603926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_100605143_100606357_100606428_100612397_100612511_100614315_100614431_100625534_100625677_100625784_100625893_100626070_100626151_100634804_100634937_100635023_100635196_100636531_100636735_100637537_100637703_100637929_100638023_100642210_100642312_100656380_100656469_100662963_100663181_100664220_100664337_100668578_100668795_100674743
H1_mix_00023438	chr13	-	3593	18	NIC	ENSG00000125247.16	novel	3911	19	NA	NA	0	-12	combination_of_known_splicesites	FALSE	canonical	3	18	junction_13	37.355581194338	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGCATGAAAATGTCATAT	NA	False	NA	-16	True	AGTAAA	-14	NA	100674879	100603938	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_100605143_100606357_100606428_100612397_100612511_100614315_100614431_100625534_100625677_100625784_100625893_100626070_100626151_100634804_100634937_100635023_100635196_100636531_100636735_100637537_100637703_100637929_100638023_100642210_100642312_100662963_100663181_100664220_100664337_100668578_100668795_100670359_100670570_100674743
H1_mix_00023439	chr13	-	457	1	NIC	ENSG00000237082.1	novel	211	2	NA	NA	58	-40	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAATTTAGTCCCCTCCAT	NA	False	NA	NA	False	NA	NA	NA	100624371	100623914	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_100623900_100624400
H1_mix_00023440	chr13	-	3003	7	FSM	ENSG00000125247.16	ENST00000489713.5	2733	7	-6	-264	-6	264	multi-exon	FALSE	canonical	3	138	junction_5	14.3459247020035	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGCTGCCCTCGTTTTA	NA	False	NA	NA	False	NA	NA	NA	100638814	100624645	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_100625677_100625784_100625893_100626070_100626151_100634804_100634937_100635023_100635196_100636531_100636735_100637537
H1_mix_00023441	chr13	-	1955	14	ISM	ENSG00000125247.16	ENST00000376234.7	3483	18	96	21526	-9	0	5prime_fragment	FALSE	canonical	3	13	junction_13	39.9026922910097	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGCCCATACATTTTATA	24	True	NA	-9	True	AATAAA	-19	NA	100674783	100625452	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr13_-_100625677_100625784_100625893_100626070_100626151_100634804_100634937_100635023_100635196_100636531_100636735_100637537_100637703_100637929_100638023_100642210_100642312_100656380_100656469_100662963_100663181_100664220_100664337_100668578_100668795_100674743
H1_mix_00023442	chr13	-	2044	14	NIC	ENSG00000125247.16	novel	3911	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_10	41.6431728636741	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGCCCATACATTTTATA	NA	False	NA	-9	True	AATAAA	-19	NA	100674879	100625452	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_100625677_100625784_100625893_100626070_100626151_100634804_100634937_100635023_100635196_100636531_100636735_100637537_100637703_100637929_100638023_100642210_100642312_100656380_100656469_100664220_100664337_100668578_100668795_100670359_100670570_100674743
H1_mix_00023443	chr13	-	373	1	FSM	ENSG00000276957.1	ENST00000615349.1	536	1	-34	197	-34	-197	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCAGAGCATATGCTGTT	2896	False	NA	NA	False	AATGAA	-20	NA	102593907	102593534	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_102593500_102593900
H1_mix_00023445	chr13	-	1689	4	FSM	ENSG00000151287.17	ENST00000376019.5	1689	4	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	11.8602979164381	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTTTGTCTTATTGAT	3518	False	NA	-1	True	ATTAAA	-23	NA	102770270	102766109	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_102766581_102767272_102767479_102768259_102768312_102769310
H1_mix_00023447	chr13	-	1038	5	FSM	ENSG00000151287.17	ENST00000376021.8	1038	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	47.0345617604757	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTTTGTCTTATTGAT	-14	True	NA	-1	True	ATTAAA	-23	NA	102773759	102766109	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_102766581_102767272_102767479_102768259_102768312_102769310_102769542_102773681
H1_mix_00023448	chr13	-	959	5	FSM	ENSG00000151287.17	ENST00000376029.3	959	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	51.337121072378	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTTTGTCTTATTGAT	-23	True	NA	-1	True	ATTAAA	-23	NA	102773811	102766109	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_102766581_102768259_102768312_102769310_102769542_102770011_102770087_102773681
H1_mix_00023449	chr13	-	2939	6	NNC	ENSG00000151287.17	novel	1362	6	NA	NA	12	-4	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	55.0178152965019	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGTGCTTTTGTCTTAT	14	True	NA	-5	True	ATTAAA	-19	NA	102773774	102766113	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_102766581_102767272_102767479_102768259_102768312_102769310_102769542_102770011_102770087_102771866
H1_mix_00023453	chr13	-	4009	3	FSM	ENSG00000134884.15	ENST00000472226.2	4009	3	0	0	0	0	multi-exon	FALSE	canonical	3	1175	junction_2	16.5	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTGAAGCAATTTTTTT	1	True	NA	-11	True	AATAAA	-35	NA	106568137	106543326	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_106544161_106557047_106559658_106567572
H1_mix_00023454	chr13	-	4007	2	ISM	ENSG00000204442.4	ENST00000375915.4	9264	3	656739	3444	656739	-3444	3prime_fragment	FALSE	canonical	3	19	junction_1	0	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTAAGTGAAAGTTGTTC	NA	False	NA	NA	False	ATTAAA	-30	NA	107210757	107166953	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr13_-_107170787_107210583
H1_mix_00023456	chr13	-	4402	4	FSM	ENSG00000174405.15	ENST00000688455.1	4348	4	-36	-18	-7	0	multi-exon	FALSE	canonical	1	1	junction_3	13.1993265821489	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTCTTATGTTCTATTC	NA	False	NA	NA	False	AATAAA	-22	NA	108218375	108207441	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_108211297_108214537_108214611_108215483_108215744_108218161
H1_mix_00023466	chr13	-	1044	3	FSM	ENSG00000134905.17	ENST00000539405.1	1041	3	0	-3	0	3	multi-exon	FALSE	canonical	3	249	junction_1	8.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGTAATCCCAGCTACT	9266	False	NA	NA	False	AATACA	-26	NA	110667458	110650243	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_110651101_110663450_110663519_110667339
H1_mix_00023468	chr13	-	12505	6	NIC	ENSG00000088448.14	novel	2495	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	75	junction_3	196.209479893302	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTCCCTGGGGTTTCTC	384	False	NA	-3	True	AATAAA	-16	NA	110914803	110878539	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_110880113_110883697_110883794_110893027_110903540_110906032_110906125_110910617_110910771_110914724
H1_mix_00023469	chr13	-	2626	7	NIC	ENSG00000088448.14	novel	2495	6	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_4	221.426749864499	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTCCCTGGGGTTTCTC	10	True	NA	-3	True	AATAAA	-16	NA	110915035	110878539	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_110880113_110883697_110883794_110893027_110893264_110900529_110900695_110906032_110906125_110910617_110910771_110914724
H1_mix_00023470	chr13	-	2495	6	FSM	ENSG00000088448.14	ENST00000267339.6	2495	6	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_3	126.048562070339	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTCCCTGGGGTTTCTC	118	False	110915091	-3	True	AATAAA	-16	NA	110915069	110878539	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_110880113_110883697_110883794_110893027_110893264_110906032_110906125_110910617_110910771_110914724
H1_mix_00023473	chr13	-	2129	5	NIC	ENSG00000088448.14	novel	1193	5	NA	NA	10	-8	intron_retention	FALSE	canonical	3	18	junction_2	281.53363475791	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGAATTTTTTTTTTTT	-7	True	NA	-8	True	ATTAAA	-16	NA	110914996	110892699	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_110894203_110894284_110894394_110906032_110906125_110910617_110910771_110914724
H1_mix_00023474	chr13	-	1146	5	NNC	ENSG00000088448.14	novel	1193	5	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	259.353523207224	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGAATTTTTTTTTTTT	182	False	NA	-8	True	ATTAAA	-16	NA	110915005	110892699	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_110893264_110894108_110894165_110906032_110906125_110910617_110910771_110914724
H1_mix_00023475	chr13	-	1199	5	FSM	ENSG00000088448.14	ENST00000310847.8	1193	5	0	-6	0	6	multi-exon	FALSE	canonical	3	44	junction_2	248.929081266131	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTAATTTGCTTCT	39	True	NA	6	True	ATTAAA	-30	NA	110915006	110892685	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_110893264_110894108_110894203_110906032_110906125_110910617_110910771_110914724
H1_mix_00023476	chr13	-	1256	5	NIC	ENSG00000088448.14	novel	1193	5	NA	NA	0	-8	combination_of_known_junctions	FALSE	canonical	3	28	junction_2	254.461195469958	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGAATTTTTTTTTTTT	39	True	NA	-8	True	ATTAAA	-16	NA	110915006	110892699	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_110893264_110900529_110900695_110906032_110906125_110910617_110910771_110914724
H1_mix_00023477	chr13	-	1099	4	ISM	ENSG00000088448.14	ENST00000267339.6	2495	6	63	14152	0	0	5prime_fragment	FALSE	canonical	3	259	junction_1	159.633608268713	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTTTAATTT	39	True	NA	0	True	ATTAAA	-24	NA	110915006	110892691	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr13_-_110893264_110906032_110906125_110910617_110910771_110914724
H1_mix_00023478	chr13	-	6741	5	NIC	ENSG00000088448.14	novel	705	6	NA	NA	2	-8	intron_retention	FALSE	canonical	3	22	junction_4	229.916289114103	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGAATTTTTTTTTTTT	10	True	NA	-8	True	ATTAAA	-16	NA	110915035	110892699	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_110893264_110900529_110906125_110910617_110910771_110911653_110911772_110914724
H1_mix_00023484	chr13	-	1508	3	FSM	ENSG00000126216.15	ENST00000611152.1	1508	3	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_2	27	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTCTCCCTGCACGTAT	NA	False	NA	NA	False	ATTAAA	-15	NA	112548172	112544555	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_112545866_112547619_112547753_112548107
H1_mix_00023485	chr13	-	2760	10	FSM	ENSG00000126216.15	ENST00000464139.5	2461	10	-71	-228	-1	228	multi-exon	FALSE	canonical	3	187	junction_1	19.2353840616713	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTCATACATGTTTGTG	NA	False	NA	NA	False	AAAAAG	-27	NA	112588206	112546253	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_112547753_112548107_112548177_112554056_112554183_112554886_112555006_112556051_112556225_112558195_112558414_112559321_112559400_112565110_112565179_112569151_112569260_112587904
H1_mix_00023486	chr13	-	1929	1	FSM	ENSG00000274922.2	ENST00000686488.1	2134	1	16	189	16	-189	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGTCCTTGGTGGCACAA	NA	False	NA	NA	False	NA	NA	NA	112689843	112687914	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_112687900_112689800
H1_mix_00023490	chr13	-	3177	7	ISM	ENSG00000126226.22	ENST00000473462.5	859	8	-19	-660	-19	0	intron_retention	FALSE	canonical	3	697	junction_4	27.6264768333246	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTGTTGGTTAAAAAAAAA	14	True	NA	-17	True	AATAAA	-20	NA	113187418	113177611	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr13_-_113178288_113178965_113179090_113179916_113180043_113180157_113180232_113181129_113181231_113184345_113184488_113185484
H1_mix_00023491	chr13	-	1630	15	NNC	ENSG00000126226.22	novel	1786	15	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	187	junction_1	190.420814867214	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTGTTGGTTAAAAAAAAA	-7	True	NA	-17	True	AATAAA	-20	NA	113208675	113177611	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_113177977_113178173_113178288_113178965_113179090_113179916_113180043_113180157_113180232_113181129_113181231_113184345_113184488_113185484_113185561_113190871_113190976_113195070_113195126_113196180_113196221_113197175_113197244_113198190_113198265_113200426_113200517_113208598
H1_mix_00023495	chr13	-	2421	5	NIC	ENSG00000139835.14	novel	1415	8	NA	NA	0	-26	intron_retention	FALSE	canonical	3	90	junction_4	97.0322111466084	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTTCTCAGCTGACTGG	-19	True	NA	-29	True	AATAAA	-25	NA	113364130	113324189	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_113325847_113325918_113326092_113344862_113344960_113350848_113350974_113363761
H1_mix_00023497	chr13	-	1850	3	NIC	ENSG00000139835.14	novel	877	3	NA	NA	22	944	combination_of_known_junctions	FALSE	canonical	3	80	junction_1	156.5	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTTCTGTTTGTGTGGGT	3	True	NA	-5	True	ATTAAA	-29	NA	113364108	113358672	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_113360285_113363761_113363911_113364019
H1_mix_00023498	chr13	-	3716	8	FSM	ENSG00000150401.15	ENST00000375403.6	3164	8	-552	0	-292	0	multi-exon	FALSE	canonical	3	29	junction_7	28.444001555509	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTTTCCTTTCGATTCT	NA	False	NA	-1	True	ATTAAA	-16	NA	113491243	113455818	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_113458109_113459311_113459409_113461053_113461137_113462739_113462892_113474123_113474255_113480574_113480744_113483839_113484057_113490666
H1_mix_00023499	chr13	-	3554	8	NIC	ENSG00000150401.15	novel	3164	8	NA	NA	7	-3	combination_of_known_splicesites	FALSE	canonical	3	30	junction_7	28.1823508238611	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCGTGGTTTCCTTTCGAT	10	True	NA	-4	True	ATTAAA	-13	NA	113490944	113455821	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_113458109_113459311_113459409_113461053_113461137_113462739_113462892_113474123_113474255_113480574_113480744_113483839_113484197_113490666
H1_mix_00023500	chr13	-	3590	7	FSM	ENSG00000150401.15	ENST00000478244.6	3032	7	-558	0	-318	0	multi-exon	FALSE	canonical	3	29	junction_6	32.7740581693645	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTTTCCTTTCGATTCT	NA	False	NA	-1	True	ATTAAA	-16	NA	113491269	113455818	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_113458109_113459311_113459409_113461053_113461137_113474123_113474255_113480574_113480744_113483839_113484057_113490666
H1_mix_00023503	chr13	-	2652	1	FSM	ENSG00000183087.15	ENST00000608763.1	2646	1	0	-6	0	6	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCCGTCATCTGCTCCCC	NA	False	NA	3	True	AATAAA	-29	NA	113823194	113820542	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_113820500_113823200
H1_mix_00023504	chr13	-	2514	15	FSM	ENSG00000183087.15	ENST00000327773.7	2508	15	0	-6	0	6	multi-exon	FALSE	canonical	3	176	junction_5	18.3710342103863	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCCGTCATCTGCTCCCC	5	True	NA	3	True	AATAAA	-29	NA	113864076	113820542	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_113821019_113821957_113822187_113823374_113823551_113826995_113827165_113828546_113828712_113832298_113832489_113832633_113832753_113834550_113834673_113835512_113835636_113838068_113838192_113839727_113839851_113846526_113846590_113848025_113848051_113863574_113863742_113863832
H1_mix_00023505	chr13	-	4204	24	FSM	ENSG00000185989.11	ENST00000334062.8	4203	24	0	-1	0	1	multi-exon	FALSE	canonical	3	87	junction_13	8.64638215588655	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCCTTGGTTTTCCAGT	-34	True	NA	0	True	ATTAAA	-24	NA	114132623	113977781	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_113979423_113981674_113981859_113992484_113992589_113996530_113996740_113999584_113999668_114000825_114000933_114007532_114007607_114009386_114009465_114011170_114011249_114013141_114013249_114015208_114015333_114016196_114016272_114017236_114017352_114018103_114018253_114018762_114018920_114021403_114021509_114024278_114024356_114027388_114027462_114027846_114027928_114029810_114029888_114040999_114041095_114052051_114052156_114073719_114073838_114132434
H1_mix_00023506	chr13	+	295	1	Intergenic	novelGene_340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CGTCTCAAAAAAAAAAAAAA	1296	False	NA	NA	False	NA	NA	NA	24696417	24696712	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_24696400_24696700
H1_mix_00023507	chr13	+	283	1	Intergenic	novelGene_341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTCTACTAAAAATGCAAAAG	6180	False	NA	NA	False	NA	NA	NA	25317875	25318158	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_25317900_25318200
H1_mix_00023508	chr13	+	1291	1	Intergenic	novelGene_346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCTGCTAAGGTCTCAG	NA	False	NA	NA	False	NA	NA	NA	36839037	36840328	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_36839000_36840300
H1_mix_00023509	chr13	+	455	1	Intergenic	novelGene_348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGTTCAGACATTAGAAGT	572	False	NA	NA	False	NA	NA	NA	41133517	41133972	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_41133500_41134000
H1_mix_00023511	chr13	+	484	1	Intergenic	novelGene_362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTACTGTTAAAAACCTTC	NA	False	NA	NA	False	AATAAA	-45	NA	44554171	44554655	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_44554200_44554700
H1_mix_00023512	chr13	+	288	1	Intergenic	novelGene_370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTTTTCCTATATATGT	NA	False	NA	NA	False	NA	NA	NA	52545815	52546103	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_52545800_52546100
H1_mix_00023513	chr13	+	214	1	Intergenic	novelGene_375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGACCCTGACACCCATC	1469	False	NA	NA	False	NA	NA	NA	54269956	54270170	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_54270000_54270200
H1_mix_00023515	chr13	+	217	1	Intergenic	novelGene_383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACCCACAAGTATAACCCA	NA	False	NA	NA	False	NA	NA	NA	56042975	56043192	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_56043000_56043200
H1_mix_00023517	chr13	+	557	1	Intergenic	novelGene_384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACCCCCCCAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	56044677	56045234	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_56044700_56045200
H1_mix_00023518	chr13	+	246	1	Intergenic	novelGene_385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTATGAATTTCATTTTC	NA	False	NA	NA	False	ATTAAA	-30	NA	56064898	56065144	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_56064900_56065100
H1_mix_00023519	chr13	+	315	1	Intergenic	novelGene_387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAGCATGTTTGAGAT	NA	False	NA	NA	False	NA	NA	NA	56114573	56114888	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_56114600_56114900
H1_mix_00023520	chr13	+	439	1	Intergenic	novelGene_388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCATCCGTGATGGTCTAGG	NA	False	NA	NA	False	NA	NA	NA	56115189	56115628	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_56115200_56115600
H1_mix_00023521	chr13	+	851	1	Intergenic	novelGene_390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGGGCACAGAAATAAGGG	NA	False	NA	NA	False	NA	NA	NA	56116162	56117013	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_56116200_56117000
H1_mix_00023522	chr13	+	355	1	Intergenic	novelGene_403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTTGGATGAATTGAGAA	NA	False	NA	NA	False	AAGAAA	-39	NA	66141665	66142020	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_66141700_66142000
H1_mix_00023523	chr13	+	201	1	Intergenic	novelGene_406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGCAGGATGGAAAAATTCA	NA	False	NA	NA	False	NA	NA	NA	66145419	66145620	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_66145400_66145600
H1_mix_00023524	chr13	+	335	1	Intergenic	novelGene_407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAATGCAGTGGCAGCTGC	NA	False	NA	NA	False	NA	NA	NA	66228112	66228447	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_66228100_66228400
H1_mix_00023526	chr13	+	203	1	Intergenic	novelGene_411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAAGAAGGGGGCGGACT	NA	False	NA	NA	False	NA	NA	NA	77936285	77936488	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_77936300_77936500
H1_mix_00023527	chr13	+	417	1	Intergenic	novelGene_412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGAGTTCTCATTATTC	NA	False	NA	NA	False	AAAAAG	-44	NA	87347620	87348037	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_87347600_87348000
H1_mix_00023528	chr13	+	281	1	Intergenic	novelGene_413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4402	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGACTAGACAGAAGATAG	NA	False	NA	NA	False	NA	NA	NA	88513527	88513808	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_88513500_88513800
H1_mix_00023529	chr13	+	263	1	Intergenic	novelGene_414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCACCACGAGGTGGAT	NA	False	NA	NA	False	AATATA	-5	NA	88515112	88515375	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_88515100_88515400
H1_mix_00023532	chr13	+	802	1	Intergenic	novelGene_415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCACTGTTTTAAAGTTTT	NA	False	NA	NA	False	AATAAA	-28	NA	98812127	98812929	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_98812100_98812900
H1_mix_00023536	chr13	+	562	1	FSM	ENSG00000228797.2	ENST00000447172.1	505	1	93	-150	93	150	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCCTGCACCCCCAGGG	NA	False	NA	NA	False	AATAAA	-13	NA	18697095	18697657	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_18697100_18697700
H1_mix_00023537	chr13	+	252	2	ISM	ENSG00000224976.2	ENST00000446672.2	3326	21	53431	-46	53431	46	3prime_fragment	FALSE	canonical	3	38	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAATAATCAAACGATAA	NA	False	NA	NA	False	AATGAA	-34	NA	19402567	19408008	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr13_+_19402581_19407769
H1_mix_00023538	chr13	+	3113	14	NIC	ENSG00000196199.14	novel	4239	14	NA	NA	-7	0	intron_retention	TRUE	canonical	3	34	junction_12	25.6471274790959	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCTTCTAGCACATCTA	-20	True	NA	-35	True	NA	NA	NA	19633651	19671942	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_19633962_19642114_19642271_19646442_19647292_19648421_19648522_19650002_19650261_19658994_19659121_19659200_19659290_19661697_19661839_19663039_19663127_19666424_19666580_19668376_19668532_19670235_19670364_19670839_19671290_19671833
H1_mix_00023540	chr13	+	583	3	FSM	ENSG00000196199.14	ENST00000496525.1	583	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	33	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCTTCTAGCACATCTA	NA	False	NA	-35	True	NA	NA	NA	19670339	19671942	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_19670364_19670839_19671290_19671833
H1_mix_00023541	chr13	+	1916	8	FSM	ENSG00000121741.17	ENST00000382881.7	1912	8	-4	0	-4	0	multi-exon	FALSE	canonical	3	186	junction_3	47.646658661785	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTTTCTTTCAAAAAAATT	-12	True	NA	NA	False	TATAAA	-42	NA	19958672	20019963	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_19958842_19959957_19960027_19993062_19993565_19993825_19993920_20002849_20003136_20005073_20005240_20006373_20006587_20019546
H1_mix_00023543	chr13	+	3456	19	FSM	ENSG00000121741.17	ENST00000382870.7	3456	19	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	147.433401997958	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATGTATGTATGTGTG	2005	False	NA	16	True	AATAAA	-20	NA	20026518	20086747	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_20026763_20027202_20027319_20027984_20028065_20031318_20031436_20034253_20034405_20036736_20036910_20051432_20051599_20052276_20052312_20058574_20058705_20059446_20059563_20061052_20061225_20062845_20062972_20064450_20064546_20066850_20067020_20067238_20067391_20082015_20082131_20082780_20083033_20083655_20083777_20085821
H1_mix_00023544	chr13	+	1267	1	FSM	ENSG00000279951.1	ENST00000623873.1	1513	1	-250	496	-250	-496	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGCATGTTACTGTGTT	NA	False	NA	NA	False	NA	NA	NA	20092381	20093648	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_20092400_20093600
H1_mix_00023545	chr13	+	3035	28	FSM	ENSG00000032742.18	ENST00000319980.10	3091	28	-17	73	-17	-73	multi-exon	TRUE	canonical	2	3	junction_2	18.0366187494277	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTAGGCCAGTGACTTC	0	True	NA	14	True	AATAAA	-16	NA	20567120	20691364	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_20567257_20567669_20567786_20567884_20567998_20574379_20574476_20582956_20583020_20589810_20589868_20590966_20591021_20591617_20591682_20592334_20592405_20596149_20596241_20597014_20597120_20598650_20598754_20599450_20599566_20601704_20601934_20605034_20605106_20615792_20615880_20625749_20625850_20631015_20631103_20638331_20638519_20641289_20641399_20643454_20643606_20644842_20644959_20653875_20653929_20656364_20656431_20663497_20663605_20670972_20671040_20690704_20690816_20691053
H1_mix_00023546	chr13	+	3184	19	NIC	ENSG00000032742.18	novel	2850	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_12	14.0428137238928	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCATTTCACTGAGAT	-14	True	NA	NA	False	AATAAA	-14	NA	20567156	20642896	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_20567257_20574379_20574476_20582956_20583020_20589810_20589868_20590966_20591021_20591617_20591682_20592334_20592405_20596149_20596241_20597014_20597120_20598650_20598754_20599450_20599566_20601704_20601749_20601850_20601934_20605034_20605106_20615792_20615880_20625749_20625850_20631015_20631103_20638331_20638519_20641289
H1_mix_00023547	chr13	+	1981	2	FSM	ENSG00000172458.5	ENST00000682841.1	2056	2	75	0	75	0	multi-exon	FALSE	canonical	2	4	junction_1	0	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTGGCTGTGTGTATTT	75	False	NA	6	True	ATTAAA	-18	NA	20703773	20723098	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_20704292_20721635
H1_mix_00023548	chr13	+	1016	2	Genic_Genomic	ENSG00000213621.3	novel	886	1	NA	NA	-24	7734	multi-exon	FALSE	non_canonical	0	0	junction_1	0	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGAGTACTACTTACGAA	NA	False	NA	NA	False	NA	NA	NA	20961285	20969929	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr13_+_20962271_20969898
H1_mix_00023549	chr13	+	670	2	FSM	ENSG00000150459.12	ENST00000471009.1	670	2	0	0	0	0	multi-exon	FALSE	canonical	3	3201	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATACTCTTCTTCCTCC	5505	False	NA	49	True	NA	NA	NA	21146463	21147391	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_21146928_21147185
H1_mix_00023550	chr13	+	349	3	FSM	ENSG00000233325.4	ENST00000424756.2	1310	3	-2	963	-2	-963	multi-exon	FALSE	canonical	3	6	junction_1	5.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGGATCAAAAATATCTG	-24	True	NA	NA	False	NA	NA	NA	21298136	21304555	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_21298197_21301418_21301619_21304466
H1_mix_00023552	chr13	+	634	1	FSM	ENSG00000230022.1	ENST00000430308.1	634	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACACCAACCCGAAAAACT	NA	False	NA	NA	False	NA	NA	NA	21530689	21531323	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_21530700_21531300
H1_mix_00023553	chr13	+	446	1	FSM	ENSG00000283075.1	ENST00000635091.1	463	1	31	-14	31	14	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGACTTCTGACTTTTAA	4914	False	NA	NA	False	AATAAA	-33	NA	22931567	22932013	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_22931600_22932000
H1_mix_00023554	chr13	+	786	4	FSM	ENSG00000205861.13	ENST00000663394.1	804	4	18	0	18	0	multi-exon	FALSE	canonical	2	2	junction_1	4.64279609239471	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTTGTGAACAACTTTG	-17	True	NA	7	True	AATAAA	-19	NA	23889448	23892103	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_23889554_23889999_23890043_23891384_23891532_23891612
H1_mix_00023555	chr13	+	291	1	Genic_Genomic	ENSG00000273628.1	novel	NA	NA	NA	NA	3597	97	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTCAGTGTAGCAATTAG	NA	False	NA	NA	False	AATAGA	-28	NA	24936602	24936893	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr13_+_24936600_24936900
H1_mix_00023556	chr13	+	6449	13	FSM	ENSG00000139496.16	ENST00000463407.5	6360	13	-89	0	-14	0	multi-exon	FALSE	canonical	3	122	junction_1	24.1039415863879	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACATTGTCTTGTTTTTT	-3	True	NA	2	True	AATAAA	-12	NA	25301541	25336340	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_25301881_25307805_25307949_25309246_25309283_25312882_25313033_25313613_25313752_25315356_25315468_25319325_25319351_25320529_25320596_25320918_25321094_25324988_25325069_25326915_25327035_25327429_25327513_25331356
H1_mix_00023557	chr13	+	3939	15	NIC	ENSG00000139496.16	novel	4236	16	NA	NA	-14	-281	combination_of_known_splicesites	FALSE	canonical	3	9	junction_13	46.5357005810746	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTGATTTTGTGTTTT	-3	True	NA	NA	False	NA	NA	NA	25301541	25342140	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_25301881_25307805_25307949_25309246_25309283_25312882_25313033_25313613_25313752_25315356_25315468_25319325_25319351_25320529_25320596_25320918_25321094_25324988_25325069_25326915_25327035_25327429_25327513_25331356_25331559_25338635_25338732_25339964
H1_mix_00023558	chr13	+	9657	37	FSM	ENSG00000132932.19	ENST00000381655.7	9672	37	15	0	15	0	multi-exon	TRUE	canonical	0	0	junction_1	4.0562214065267	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATTGGACTGTTTTATTT	-15	True	NA	17	True	AATAAA	-17	NA	25371988	26025851	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_25372289_25468976_25469122_25529998_25530099_25530561_25530661_25532271_25532318_25533272_25533314_25537987_25538062_25540318_25540389_25541918_25542047_25543290_25543403_25551337_25551504_25553792_25553921_25554990_25555069_25558972_25559062_25559720_25559766_25563955_25564032_25570766_25570873_25571609_25571693_25574807_25574858_25577068_25577139_25578814_25578900_25579807_25579948_25581818_25581958_25589634_25589700_25699172_25699346_25769045_25769230_25774848_25774960_25828117_25828193_25837162_25837286_25839545_25839625_25860194_25860257_25860803_25860861_25862300_25862409_25961574_25961664_25968574_25968680_26012530_26012623_26019887
H1_mix_00023560	chr13	+	443	1	FSM	ENSG00000277368.1	ENST00000621997.1	464	1	-7	28	-7	-28	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAACCCTAATAAATTCTGA	225	False	NA	-24	True	NA	NA	NA	26222183	26222626	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_26222200_26222600
H1_mix_00023561	chr13	+	551	3	FSM	ENSG00000122026.11	ENST00000473558.5	551	3	0	0	0	0	multi-exon	FALSE	canonical	3	12328	junction_1	2940	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACCTCCGCCTCCCTCCC	19	True	NA	NA	False	NA	NA	NA	27251361	27254467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_27251586_27253764_27253844_27254219
H1_mix_00023562	chr13	+	684	6	FSM	ENSG00000122026.11	ENST00000461690.5	681	6	-3	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	7451.27270739704	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAGGACATGAGGTAGCT	2	True	NA	71	True	NA	NA	NA	27251557	27256691	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_27251586_27253764_27253844_27254219_27254282_27255241_27255350_27256183_27256335_27256435
H1_mix_00023564	chr13	+	453	4	FSM	ENSG00000122026.11	ENST00000483765.5	453	4	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_1	8808.34367076025	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGACCTCTGGGCTACAA	14	False	NA	-17	True	NA	NA	NA	27253764	27256545	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_27253844_27255241_27255355_27256183_27256335_27256435
H1_mix_00023565	chr13	+	675	3	FSM	ENSG00000122026.11	ENST00000485756.1	675	3	0	0	0	0	multi-exon	FALSE	canonical	3	18852	junction_1	63	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACCTCTGGGCTACAAAAA	1193	False	NA	-14	True	AATAAA	-1	NA	27254943	27256548	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_27255355_27256183_27256335_27256435
H1_mix_00023566	chr13	+	707	6	FSM	ENSG00000122034.17	ENST00000435781.5	688	6	-19	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	428.216300483763	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAAAAACATGGACGGAAC	-18	True	NA	NA	False	AAAAAG	-14	NA	27424618	27434169	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_27424939_27427091_27427193_27429869_27429967_27430537_27430622_27432730_27432805_27434138
H1_mix_00023567	chr13	+	748	6	FSM	ENSG00000122034.17	ENST00000493903.1	748	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	416.428337172196	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCACTCACCCTCATAC	2082	False	NA	NA	False	AATGAA	-2	NA	27429212	27435034	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_27429390_27429869_27429967_27430532_27430622_27432730_27432805_27434138_27434220_27434804
H1_mix_00023568	chr13	+	2262	3	FSM	ENSG00000186184.20	ENST00000637180.1	2262	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	147	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCATGGAGTTTTTAAAAA	-4	True	NA	-39	True	TTTAAA	-18	NA	27620918	27667353	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_27621438_27648378_27648454_27665685
H1_mix_00023570	chr13	+	339	1	FSM	ENSG00000200840.1	ENST00000363970.1	107	1	70	-302	70	302	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTGTGAGTGTACATAT	NA	False	NA	NA	False	NA	NA	NA	28232570	28232909	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_28232600_28232900
H1_mix_00023572	chr13	+	1134	3	FSM	ENSG00000132952.12	ENST00000465952.5	1133	3	-1	0	-1	0	multi-exon	FALSE	canonical	3	56	junction_1	50	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGTACTAATATTTTATT	99	False	NA	NA	False	AATACA	-35	NA	30617691	30631474	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_30618057_30621763_30621893_30630834
H1_mix_00023573	chr13	+	7166	7	NIC	ENSG00000132952.12	novel	4894	9	NA	NA	34	-1217	intron_retention	FALSE	canonical	3	116	junction_3	12.733376963276	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTTTTGGTTTCATTT	5	True	NA	2	True	ATTAAA	-15	NA	30617970	30659549	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_30621893_30630834_30631475_30637743_30637858_30642627_30642758_30646931_30647058_30653147_30653306_30657473
H1_mix_00023574	chr13	+	746	5	NNC	ENSG00000236094.3	novel	641	3	NA	NA	20	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	58.9067059000926	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTTGCGTATTTTTAAA	NA	False	NA	NA	False	AATAAA	-26	NA	30863388	30883403	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_30863579_30875273_30875367_30881951_30882005_30882559_30882660_30883093
H1_mix_00023575	chr13	+	13005	62	FSM	ENSG00000073910.23	ENST00000645780.1	13017	62	12	0	12	0	multi-exon	TRUE	canonical	1	5	junction_1	6.20560556643078	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAATTTTTTTAAAGGA	-30	True	NA	NA	False	TTTAAA	-38	NA	31846724	32299105	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_31846940_31946008_31946182_32078833_32079034_32101962_32102017_32117333_32117474_32124285_32124377_32124601_32124682_32124794_32124876_32131671_32131841_32134903_32134997_32135084_32135184_32136870_32136973_32147281_32147386_32147838_32147948_32149747_32149835_32155490_32155663_32157272_32157406_32161143_32161252_32171011_32171271_32173366_32173550_32175545_32175633_32178176_32178437_32178843_32179034_32179674_32179800_32182976_32183035_32184599_32184692_32184975_32185149_32186259_32186421_32187545_32187657_32194142_32194298_32201940_32202041_32202355_32202528_32208852_32209110_32209584_32209732_32210865_32211035_32212291_32212383_32218748_32218832_32224234_32224386_32224932_32225037_32225788_32225975_32228455_32228655_32231178_32231301_32234573_32234762_32236077_32236173_32237378_32237987_32239251_32239350_32239710_32239882_32244041_32244183_32247322_32247503_32249525_32249688_32251877_32251953_32254223_32254395_32261615_32261817_32262313_32262476_32265449_32265617_32267169_32267360_32274841_32274992_32276463_32276563_32278464_32278549_32289632_32289744_32294367_32294571_32295201
H1_mix_00023576	chr13	+	12927	61	FSM	ENSG00000073910.23	ENST00000647500.1	12973	61	46	0	46	0	multi-exon	FALSE	canonical	2	7	junction_1	5.99803208468318	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAATTTTTTTAAAGGA	8	True	NA	NA	False	TTTAAA	-38	NA	31945871	32299105	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_31946182_32078833_32079034_32101962_32102017_32117333_32117474_32124285_32124377_32124601_32124682_32124794_32124876_32131671_32131841_32134903_32134997_32135084_32135184_32136870_32136973_32147281_32147386_32147838_32147948_32149747_32149835_32155490_32155663_32157272_32157406_32161143_32161252_32171011_32171271_32173366_32173550_32175545_32175633_32178176_32178437_32178843_32179034_32179674_32179800_32182976_32183035_32184599_32184692_32184975_32185149_32186259_32186421_32187545_32187657_32194142_32194298_32201940_32202041_32202355_32202528_32208852_32209110_32209584_32209732_32210865_32211035_32212291_32212383_32218748_32218832_32224234_32224386_32224932_32225037_32225788_32225975_32228455_32228655_32231178_32231301_32234573_32234762_32236077_32236173_32237378_32237987_32239251_32239350_32239710_32239882_32244041_32244183_32247322_32247503_32249525_32249688_32251877_32251953_32254223_32254395_32261615_32261817_32262313_32262476_32265449_32265617_32267169_32267360_32274841_32274992_32276463_32276563_32278464_32278549_32289632_32289744_32294367_32294571_32295201
H1_mix_00023577	chr13	+	3593	1	FSM	ENSG00000073910.23	ENST00000490410.1	3283	1	191	-501	191	470	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAATGCTTTTAAAAGTG	4486	False	NA	NA	False	NA	NA	NA	31950349	31953942	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_31950300_31953900
H1_mix_00023578	chr13	+	13284	61	FSM	ENSG00000073910.23	ENST00000542859.6	12729	61	-552	-3	-78	3	multi-exon	FALSE	canonical	2	6	junction_1	6.03241245274227	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGCTGCTATGTGCAGA	-4	True	NA	NA	False	AATAAA	-22	NA	32031221	32299128	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_32031866_32078833_32079034_32101962_32102017_32117333_32117474_32124285_32124377_32124601_32124682_32124794_32124876_32131671_32131841_32134903_32134997_32135084_32135184_32136870_32136973_32147281_32147386_32147838_32147948_32149747_32149835_32155490_32155663_32157272_32157406_32161143_32161252_32171011_32171271_32173366_32173550_32175545_32175633_32178176_32178437_32178843_32179034_32179674_32179800_32182976_32183035_32184599_32184692_32184975_32185149_32186259_32186421_32187545_32187657_32194142_32194298_32201940_32202041_32202355_32202528_32208852_32209110_32209584_32209732_32210865_32211035_32212291_32212383_32218748_32218832_32224234_32224386_32224932_32225037_32225788_32225975_32228455_32228655_32231178_32231301_32234573_32234762_32236077_32236173_32237378_32237987_32239251_32239350_32239710_32239882_32244041_32244183_32247322_32247503_32249525_32249688_32251877_32251953_32254223_32254395_32261615_32261817_32262313_32262476_32265449_32265617_32267169_32267360_32274841_32274992_32276463_32276563_32278464_32278549_32289632_32289744_32294367_32294571_32295201
H1_mix_00023580	chr13	+	456	2	FSM	ENSG00000139618.17	ENST00000533776.1	523	2	67	0	67	0	multi-exon	FALSE	canonical	3	61	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAAGAACTGAATT	NA	False	NA	NA	False	NA	NA	NA	32396875	32398448	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_32397045_32398161
H1_mix_00023581	chr13	+	2320	3	FSM	ENSG00000083642.19	ENST00000493653.1	972	3	-126	-1222	-27	1222	multi-exon	FALSE	canonical	3	220	junction_1	8	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCTTGTTGGCATTCT	3	True	NA	NA	False	NA	NA	NA	32586424	32653827	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_32586594_32648753_32648881_32651803
H1_mix_00023587	chr13	+	4658	5	NNC	ENSG00000274317.2	novel	1030	4	NA	NA	-19074	27	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	3.8405728739343	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAGCACAATAAAAATAGAA	2	True	NA	NA	False	AAAACA	-42	NA	37915223	38048196	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_37915350_37997811_37997938_38013384_38013502_38029648_38029692_38043950
H1_mix_00023590	chr13	+	3449	20	FSM	ENSG00000133103.17	ENST00000356576.8	3449	20	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	55.8570097674965	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTATATAATTTATTT	38	True	NA	11	True	AATAAA	-18	NA	39655723	39752500	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_39655880_39656825_39656891_39659363_39659508_39660809_39660882_39665095_39665155_39677467_39677580_39679537_39679621_39679974_39680046_39682170_39682265_39687502_39687632_39687707_39687800_39689759_39689825_39694633_39694726_39699500_39699619_39719235_39719368_39719659_39719828_39723332_39723441_39724507_39724562_39727468_39727549_39750945
H1_mix_00023591	chr13	+	564	7	FSM	ENSG00000133103.17	ENST00000536488.5	564	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	67.5345590543587	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGTGGATTTATTGATGCG	3624	False	NA	NA	False	NA	NA	NA	39659395	39687546	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_39659508_39660809_39660882_39665095_39665155_39677467_39677580_39679974_39680046_39682170_39682265_39687502
H1_mix_00023592	chr13	+	467	4	FSM	ENSG00000133103.17	ENST00000537156.1	530	4	63	0	63	0	multi-exon	FALSE	canonical	3	152	junction_1	17.4610678049451	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAGACCAATTGAAATGCA	NA	False	NA	NA	False	NA	NA	NA	39679409	39687593	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_39679621_39679974_39680046_39682170_39682265_39687502
H1_mix_00023593	chr13	+	257	2	FSM	ENSG00000133103.17	ENST00000465775.1	753	2	379	117	379	-117	multi-exon	FALSE	canonical	3	166	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGAGTAATATTTATAATA	NA	False	NA	NA	False	TTTAAA	-31	NA	39679974	39682356	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_39680046_39682170
H1_mix_00023594	chr13	+	318	2	FSM	ENSG00000133103.17	ENST00000460701.1	318	2	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTAAAATATTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	39687542	39689820	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_39687800_39689759
H1_mix_00023595	chr13	+	2764	8	NNC	ENSG00000102743.15	novel	3821	7	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	62.4104256073438	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTCTGATGAATTTCA	NA	False	NA	15	True	ATTAAA	-15	NA	40789408	40812460	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_40789664_40793157_40793282_40799056_40799316_40805117_40805256_40807293_40807464_40808437_40808597_40809542_40810188_40811446
H1_mix_00023596	chr13	+	2767	8	NNC	ENSG00000102743.15	novel	3821	7	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	62.4104256073438	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTCTGATGAATTTCA	NA	False	NA	15	True	ATTAAA	-15	NA	40789408	40812460	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_40789664_40793157_40793282_40799056_40799316_40805117_40805256_40807293_40807464_40808437_40808597_40809542_40810197_40811452
H1_mix_00023597	chr13	+	623	4	FSM	ENSG00000278390.6	ENST00000620300.4	613	4	-10	0	3	0	multi-exon	FALSE	canonical	3	6	junction_2	1.63299316185545	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAACATCTTACCAGGAGA	-4	True	NA	NA	False	ATTAAA	-35	NA	41132941	41175659	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_41133056_41146426_41146508_41162262_41162404_41175372
H1_mix_00023602	chr13	+	9930	13	FSM	ENSG00000023516.9	ENST00000025301.4	9915	13	-15	0	-15	0	multi-exon	FALSE	canonical	1	1	junction_5	8.59586463881842	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCTTGGTTTTCATTC	-31	True	NA	9	True	AATAAA	-12	NA	42272136	42323261	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_42272229_42285985_42286036_42286299_42286400_42292384_42292502_42295694_42295743_42297047_42297183_42298532_42298798_42299362_42303864_42308453_42308610_42313046_42313131_42313893_42313941_42317527_42317689_42319087
H1_mix_00023603	chr13	+	9853	12	NIC	ENSG00000023516.9	novel	9915	13	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	8.36758799927553	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCTTGGTTTTCATTC	-4	True	NA	9	True	AATAAA	-12	NA	42272163	42323261	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_42272229_42286299_42286400_42292384_42292502_42295694_42295743_42297047_42297183_42298532_42298798_42299362_42303864_42308453_42308610_42313046_42313131_42313893_42313941_42317527_42317689_42319087
H1_mix_00023604	chr13	+	641	3	FSM	ENSG00000227258.7	ENST00000654757.1	1793	3	-3	1155	-3	-1155	multi-exon	FALSE	canonical	2	6	junction_1	2	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTGGTGGTTGCCAAT	-20	True	NA	NA	False	AATAGA	-14	NA	44142310	44146855	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_44142697_44143556_44143738_44146781
H1_mix_00023606	chr13	+	255	1	FSM	ENSG00000225727.3	ENST00000422303.1	222	1	68	-101	68	96	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCCCCTGTTTCGATGAA	NA	False	NA	NA	False	TTTAAA	-39	NA	44452668	44452923	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_44452700_44452900
H1_mix_00023607	chr13	+	1658	1	FSM	ENSG00000278156.2	ENST00000617014.1	1658	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTTGTTCTATGATATTA	NA	False	NA	NA	False	AATAAA	-22	NA	44577489	44579147	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_44577500_44579100
H1_mix_00023608	chr13	+	277	1	FSM	ENSG00000265802.2	ENST00000581392.2	298	1	5	16	5	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGATCTCGCCTCTTAGG	NA	False	NA	NA	False	NA	NA	NA	45002154	45002431	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_45002200_45002400
H1_mix_00023609	chr13	+	1280	2	FSM	ENSG00000133114.18	ENST00000473119.1	1280	2	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTAGTATTTATTTTTGT	NA	False	NA	18	True	AATAAA	-21	NA	45031203	45033611	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_45032108_45033235
H1_mix_00023610	chr13	+	1319	7	NIC	ENSG00000188342.12	novel	2228	8	NA	NA	7	-883	combination_of_known_splicesites	FALSE	canonical	2	9	junction_2	201.291179361861	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTCAAAGAACAAAGCGGT	12	True	NA	14	True	AATAAA	-25	NA	45120516	45284010	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_45120722_45136732_45136807_45151686_45151832_45207423_45207506_45252870_45252971_45267232_45267377_45283441
H1_mix_00023611	chr13	+	2035	11	FSM	ENSG00000170919.16	ENST00000658870.1	2079	11	44	0	-4	0	multi-exon	FALSE	canonical	2	4	junction_1	29.9147120995673	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTAGGCGACAGAGCAGG	10	True	NA	NA	False	AATACA	-45	NA	45341448	45391707	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_45341615_45369958_45370183_45377060_45377216_45378529_45378672_45379194_45379336_45379925_45380002_45383090_45383236_45383759_45383839_45389734_45389821_45390757_45390903_45391031
H1_mix_00023612	chr13	+	1900	10	FSM	ENSG00000170919.16	ENST00000652823.1	1900	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	31.6231670039233	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAAGCCATGACCATGCAC	13	True	NA	NA	False	AGTAAA	-20	NA	45341510	45391676	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_45341631_45344328_45344447_45369958_45370183_45377060_45377216_45378529_45378672_45379925_45380002_45383090_45383236_45389734_45389821_45390713_45390903_45391031
H1_mix_00023613	chr13	+	527	3	FSM	ENSG00000170919.16	ENST00000618947.1	520	3	-7	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	2	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTCAGTATTTGTTTCT	-8	True	NA	NA	False	NA	NA	NA	45341591	45360486	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_45341631_45344304_45344447_45360140
H1_mix_00023614	chr13	+	1692	9	FSM	ENSG00000170919.16	ENST00000662614.1	1692	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	32.9599662469487	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAAGCCATGACCATGCAC	NA	False	NA	NA	False	AGTAAA	-20	NA	45351901	45391676	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_45352015_45377060_45377216_45378529_45378672_45379194_45379336_45379925_45380002_45383090_45383236_45389734_45389821_45390713_45390903_45391031
H1_mix_00023615	chr13	+	4244	9	FSM	ENSG00000170919.16	ENST00000522673.6	1759	9	-2186	-299	-114	263	multi-exon	FALSE	canonical	3	26	junction_6	28.5851250653202	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCACATTTCCCCAGCTGC	NA	False	NA	-45	True	AATGAA	-30	NA	45374819	45392021	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_45377216_45378529_45378672_45379194_45379336_45379925_45380002_45383090_45383236_45383759_45383839_45389734_45389821_45390713_45390903_45391031
H1_mix_00023617	chr13	+	2997	3	FSM	ENSG00000170919.16	ENST00000330825.4	3070	3	73	0	73	0	multi-exon	FALSE	canonical	3	32	junction_1	43.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAAGCCATGACCATGCAC	NA	False	NA	NA	False	AGTAAA	-20	NA	45387657	45391676	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_45389821_45390713_45390903_45391031
H1_mix_00023618	chr13	+	436	2	FSM	ENSG00000136152.15	ENST00000476702.1	255	2	-176	-5	-10	5	multi-exon	FALSE	canonical	3	13	junction_1	0	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCAGTCTGTTTATAAT	3	True	NA	NA	False	AATAAA	-19	NA	45464887	45466629	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_45465211_45466516
H1_mix_00023619	chr13	+	392	1	FSM	ENSG00000136152.15	ENST00000618913.1	530	1	156	-18	156	18	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCAGTGCTGGTTTTCGG	436	False	NA	NA	False	AATAAA	-37	NA	45465440	45465832	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_45465400_45465800
H1_mix_00023620	chr13	+	403	1	FSM	ENSG00000234145.1	ENST00000432820.1	1147	1	442	302	442	-302	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTACTGTGACTAAAACAGT	259	False	NA	NA	False	NA	NA	NA	47763901	47764304	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_47763900_47764300
H1_mix_00023621	chr13	+	2037	8	FSM	ENSG00000102531.16	ENST00000378383.5	2037	8	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	21.800580407926	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAGAAGTTGATTATTCT	25	False	NA	NA	False	AATAAA	-18	NA	48976068	49146847	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_48976178_49006151_49006290_49075288_49075365_49114654_49114732_49131136_49131375_49136331_49136602_49138746_49138806_49145777
H1_mix_00023625	chr13	+	1077	2	FSM	ENSG00000136147.18	ENST00000460489.1	1077	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGATGCAACTGTGAAAGT	NA	False	NA	NA	False	NA	NA	NA	49521936	49524080	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_49522108_49523174
H1_mix_00023626	chr13	+	7257	3	NNC	ENSG00000204977.10	novel	7255	2	NA	NA	-12	0	intron_retention	FALSE	non_canonical	1	23	junction_2	132.5	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTAGTTTGGTAATTCT	233	False	NA	16	True	AATAAA	-17	NA	49997006	50018467	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_49997764_50011934_50015086_50015118
H1_mix_00023627	chr13	+	6719	4	NNC	ENSG00000204977.10	novel	7255	2	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	127.206743357243	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTAGTTTGGTAATTCT	233	False	NA	16	True	AATAAA	-17	NA	49997006	50018467	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_49997132_49997669_49997764_50011934_50015088_50015120
H1_mix_00023628	chr13	+	1544	11	FSM	ENSG00000136104.21	ENST00000645188.1	1525	11	-21	2	0	-2	multi-exon	FALSE	canonical	1	13	junction_5	138.825213848206	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTAGAGTGTATGACTG	-26	True	NA	1	True	AATAAA	-13	NA	50909746	50956758	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_50910141_50927406_50927479_50929474_50929583_50930682_50930760_50934884_50935000_50943329_50943395_50945426_50945533_50947986_50948069_50949462_50949506_50953904_50953986_50956357
H1_mix_00023630	chr13	+	1945	3	Genic_Genomic	ENSG00000274652.1	novel	790	1	NA	NA	-10080	0	multi-exon	TRUE	canonical	0	0	junction_1	43.5	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGATGATGTCTCCAGA	60	False	NA	5	True	AATAAA	-14	NA	51170097	51180967	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr13_+_51170248_51174939_51176044_51180276
H1_mix_00023631	chr13	+	4355	3	Intergenic	novelGene_368	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	55	junction_2	11.5	190	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTATTGATGTACATTTA	60	False	NA	98	True	TTTAAA	-16	NA	51170097	51187599	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_51170463_51172316_51176044_51187336
H1_mix_00023632	chr13	+	838	1	FSM	ENSG00000224892.6	ENST00000427198.2	791	1	29	-76	29	76	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCAGAGTCTTATGCC	50	False	NA	NA	False	AAAAAG	-5	NA	51460553	51461391	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_51460600_51461400
H1_mix_00023633	chr13	+	226	1	FSM	ENSG00000279677.1	ENST00000624532.1	337	1	91	20	91	-20	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCAGGCACCCTCTTCCT	NA	False	NA	NA	False	GGGGCT	-16	NA	51921341	51921567	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_51921300_51921600
H1_mix_00023634	chr13	+	5531	3	FSM	ENSG00000253710.5	ENST00000679544.1	5510	3	-21	0	-14	0	multi-exon	FALSE	canonical	2	11	junction_2	80	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAAGCTCCATATGCCAA	662	False	NA	-37	True	NA	NA	NA	52012376	52033532	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_52012463_52018912_52019144_52028318
H1_mix_00023637	chr13	+	571	4	FSM	ENSG00000244471.6	ENST00000649839.1	865	4	74	220	74	-220	multi-exon	FALSE	canonical	3	15	junction_2	7.25718035235908	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAACAAGGGAGATGATAGA	NA	False	NA	NA	False	NA	NA	NA	52570226	52583272	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_52570467_52571231_52571294_52579343_52579436_52583095
H1_mix_00023639	chr13	+	2963	5	NNC	ENSG00000250299.6	novel	926	6	NA	NA	-64	-5384	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	45.9802946924006	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTTGACTCTTTTTAACA	10	False	NA	NA	False	ATTAAA	-30	NA	52617493	52631984	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_52617683_52621988_52622265_52627437_52627579_52629218_52629360_52629768
H1_mix_00023640	chr13	+	376	1	FSM	ENSG00000271652.1	ENST00000605764.1	376	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTCCTGAGTGTAACAT	NA	False	NA	NA	False	NA	NA	NA	54116475	54116851	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_54116500_54116900
H1_mix_00023641	chr13	+	563	1	Intergenic	novelGene_374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCCTAAGCCGCGTCCCA	130	False	NA	NA	False	NA	NA	NA	54268617	54269180	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_54268600_54269200
H1_mix_00023642	chr13	+	882	2	Antisense	novelGene_ENSG00000274090.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	369	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGGCATTCCTTGGCCCA	NA	False	NA	NA	False	NA	NA	NA	55580780	55658392	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr13_+_55581235_55657964
H1_mix_00023643	chr13	+	1041	3	Intergenic	novelGene_380	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	35	junction_1	5.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTCAGCTTCTTACTCT	NA	False	NA	14	True	AATAAA	-22	NA	55660741	55672522	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_55661073_55670879_55670978_55671910
H1_mix_00023644	chr13	+	958	1	FSM	ENSG00000238213.1	ENST00000448913.1	1231	1	298	-25	298	25	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATATAGAATGGTGGGAAT	9032	False	NA	NA	False	NA	NA	NA	60275073	60276031	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_60275100_60276000
H1_mix_00023645	chr13	+	2483	14	FSM	ENSG00000083544.16	ENST00000377894.6	2484	14	0	1	0	-1	multi-exon	FALSE	canonical	2	6	junction_1	17.0186114620046	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTGTGTTTTATTTGC	1	True	NA	20	True	AATAAA	-21	NA	60396987	60573876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_60397011_60439687_60439773_60444686_60444749_60460379_60460541_60467237_60467380_60483774_60483847_60485798_60485949_60494434_60494576_60509762_60509920_60510629_60510756_60528366_60529218_60535107_60535234_60567524_60567651_60573615
H1_mix_00023646	chr13	+	1567	3	Intergenic	novelGene_397	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	33	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	27	True	AATAAA	-22	NA	61088774	61094403	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_61089014_61089973_61090921_61094022
H1_mix_00023647	chr13	+	480	3	Intergenic	novelGene_401	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	32	30	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGACATGCCACCAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	61206008	61210962	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_61206232_61207190_61207352_61210866
H1_mix_00023648	chr13	+	320	2	Intergenic	novelGene_402	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	38	junction_1	0	21	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGACATGCCACCAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	61207124	61210962	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_61207352_61210869
H1_mix_00023649	chr13	+	468	1	FSM	ENSG00000236534.1	ENST00000440551.1	403	1	-22	-43	-22	43	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTTTTTTTTTTCTCTT	62	False	NA	NA	False	NA	NA	NA	71675044	71675512	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_71675000_71675500
H1_mix_00023650	chr13	+	401	1	FSM	ENSG00000226617.1	ENST00000433345.1	446	1	140	-95	140	95	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGCTATTTAGGGCTGT	181	False	NA	NA	False	NA	NA	NA	72703832	72704233	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_72703800_72704200
H1_mix_00023652	chr13	+	945	9	NIC	ENSG00000118939.18	novel	1050	8	NA	NA	31	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_1	362.853599093353	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTATGTTATTTTTGCTC	13	True	NA	46	True	ATTAAA	-33	NA	75549513	75605949	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_75549671_75549975_75549988_75560752_75560882_75566694_75566852_75567226_75567313_75569459_75569508_75594914_75594991_75604768_75604828_75605728
H1_mix_00023653	chr13	+	968	9	NIC	ENSG00000118939.18	novel	931	9	NA	NA	0	-53	combination_of_known_splicesites	FALSE	canonical	3	11	junction_6	553.016486530917	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCAAAAATTTTGATATTT	10	True	NA	-26	True	ACTAAA	-20	NA	75549790	75605877	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_75549863_75560752_75560882_75566694_75566852_75567226_75567313_75569459_75569508_75589937_75590130_75594914_75594991_75604768_75604828_75605728
H1_mix_00023657	chr13	+	5785	30	FSM	ENSG00000136153.20	ENST00000341547.8	7237	30	1329	123	1329	-119	multi-exon	FALSE	canonical	1	3	junction_27	34.8717712205995	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCATCTCACTGCATGTT	161	False	NA	NA	False	NA	NA	NA	75621762	75859747	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_75621869_75623270_75623321_75713181_75713253_75727028_75727099_75760931_75761039_75795400_75795432_75796635_75796750_75800683_75800883_75804288_75804542_75809153_75809184_75817160_75817279_75819392_75819536_75821176_75821610_75823564_75823874_75833050_75833166_75834225_75834388_75835232_75835340_75836396_75836458_75838139_75838197_75840084_75840111_75840390_75840496_75841108_75841202_75841627_75841984_75842850_75842917_75845326_75845380_75849078_75849293_75853091_75853389_75855259_75855369_75856505_75856609_75857920
H1_mix_00023660	chr13	+	6268	28	NIC	ENSG00000136153.20	novel	7147	31	NA	NA	250	-119	combination_of_known_junctions	FALSE	canonical	2	15	junction_15	32.2206044719481	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCATCTCACTGCATGTT	202	False	NA	NA	False	NA	NA	NA	75636059	75859747	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_75636727_75713181_75713253_75727028_75727099_75760931_75761039_75795400_75795432_75796635_75796750_75800683_75800883_75804288_75804542_75809153_75809184_75817160_75817279_75819392_75819536_75821176_75821610_75823564_75823874_75833050_75833166_75834225_75834388_75835151_75835340_75836396_75836458_75838139_75838197_75840084_75840111_75840390_75840496_75841108_75841202_75841627_75841984_75842850_75842917_75845326_75845380_75849078_75849293_75853091_75853389_75856505_75856609_75857920
H1_mix_00023661	chr13	+	4765	27	NIC	ENSG00000136153.20	novel	7147	31	NA	NA	11	2	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	32.0973002975411	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGTGGGTCGTCTTTTTCT	5	True	NA	18	True	AATAAA	-18	NA	75636340	75858677	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_75636727_75727028_75727099_75760931_75761039_75795400_75795432_75796635_75796750_75800683_75800883_75804288_75804542_75809153_75809184_75817160_75817279_75819392_75819536_75821176_75821610_75823564_75823874_75833050_75833166_75834225_75834388_75835232_75835340_75836396_75836458_75838139_75838197_75840084_75840111_75840390_75840496_75841108_75841202_75841627_75841984_75842850_75842917_75845326_75845380_75849078_75849293_75853091_75853389_75856505_75856609_75857920
H1_mix_00023667	chr13	+	2511	1	FSM	ENSG00000102805.16	ENST00000636405.1	2511	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTTAGTTTATCATTTG	181	False	NA	NA	False	NA	NA	NA	76992356	76994867	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_76992400_76994900
H1_mix_00023688	chr13	+	4883	19	FSM	ENSG00000125304.10	ENST00000642475.1	3858	19	-219	-806	213	92	multi-exon	TRUE	canonical	3	22	junction_1	510.820125501417	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTCAAGCAATTCTCCTG	NA	False	NA	NA	False	NA	NA	NA	99498736	99564140	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_99499470_99500596_99500785_99501018_99501778_99517613_99517682_99520035_99520130_99529466_99529595_99536607_99536738_99537738_99537864_99539445_99539558_99540713_99540794_99541558_99541668_99543862_99543996_99546984_99547105_99549164_99549223_99552166_99552327_99554303_99554456_99555535_99555648_99559362_99559535_99562690
H1_mix_00023713	chr13	+	6269	30	FSM	ENSG00000126217.21	ENST00000375604.6	6445	30	104	72	33	-72	multi-exon	FALSE	canonical	1	2	junction_1	16.6437813548589	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATCTAATAAAACTGACTAA	29	False	NA	-69	True	NA	NA	NA	113001817	113099663	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_113001984_113014762_113014847_113024643_113024759_113045270_113045362_113060592_113060713_113064303_113064421_113064935_113065086_113066045_113066171_113070058_113070174_113074443_113074564_113074997_113075190_113075965_113076158_113077051_113077212_113078362_113078437_113078665_113078740_113081212_113081280_113082426_113082543_113083997_113084068_113084891_113084985_113085085_113085179_113086123_113086250_113087234_113087457_113087706_113087800_113088326_113088406_113088561_113088629_113089609_113089729_113094513_113094636_113096370_113096484_113096549_113096654_113096773
H1_mix_00023716	chr13	+	2661	2	FSM	ENSG00000126217.21	ENST00000488765.1	3205	2	544	0	544	0	multi-exon	FALSE	canonical	3	74	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATCTGCCTTTGTCTGTC	5519	False	NA	12	True	AATAAA	-15	NA	113095765	113098546	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_113096654_113096773
H1_mix_00023722	chr13	+	2087	11	NIC	ENSG00000150403.18	novel	3058	13	NA	NA	0	-104	combination_of_known_splicesites	FALSE	canonical	3	29	junction_8	149.689144562991	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGGCTCGGAGATGATG	-47	True	NA	NA	False	NA	NA	NA	113491020	113549534	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_113491274_113495501_113496026_113498341_113498522_113499957_113500150_113501751_113501881_113503495_113503589_113510237_113510425_113520615_113520734_113539356_113539508_113548302_113548453_113549424
H1_mix_00023723	chr13	+	2978	12	NIC	ENSG00000150403.18	novel	3058	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	65	junction_10	109.107422992508	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGTATTGAGCTTAT	-47	True	NA	22	True	ATTAAA	-16	NA	113491020	113550229	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_113491274_113495501_113496026_113498341_113498522_113499957_113500150_113501751_113501881_113503495_113503589_113510237_113510425_113520615_113520734_113534044_113534241_113539356_113539508_113548302_113548453_113549424
H1_mix_00023725	chr13	+	1464	6	NNC	ENSG00000150403.18	novel	2843	9	NA	NA	18	5633	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	161.629700241014	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATACAGTTTCTGTTTTA	6414	False	NA	NA	False	AATAAA	-29	NA	113500041	113526294	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_113500150_113501751_113501881_113503495_113503589_113510237_113510425_113520615_113520734_113525465
H1_mix_00023728	chr13	+	2450	10	NIC	ENSG00000198176.13	novel	2639	12	NA	NA	-5	-3	combination_of_known_splicesites	FALSE	canonical	3	112	junction_4	197.813043048228	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTGTGTTTCTCTAATT	15	True	NA	10	True	AATAAA	-21	NA	113584737	113641470	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_113584889_113585773_113585850_113610995_113611063_113623179_113623287_113633119_113633286_113633889_113634034_113634533_113634603_113635976_113636129_113636533_113636701_113640119
H1_mix_00023729	chr13	+	2524	11	NIC	ENSG00000198176.13	novel	2639	12	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	112	junction_4	149.234714460142	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTTCTCTAATTCAG	23	True	NA	13	True	AATAAA	-24	NA	113584745	113641473	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_113584889_113585773_113585850_113610995_113611063_113623179_113623287_113633119_113633286_113633889_113634034_113634533_113634603_113635976_113636129_113636533_113636701_113637817_113637897_113640119
H1_mix_00023734	chr13	+	1306	4	ISM	ENSG00000169062.15	ENST00000480362.5	965	8	-92	17558	0	-226	5prime_fragment	FALSE	canonical	3	172	junction_1	130.302212823369	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCTGGCCGACATGGTG	-6	True	NA	NA	False	NA	NA	NA	114281627	114287391	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr13_+_114281847_114282020_114282128_114282836_114282944_114286518
H1_mix_00023736	chr13	+	839	7	NIC	ENSG00000169062.15	novel	2235	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	41	junction_2	155.15556709316	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGGATGTGGAGAGATCT	-6	True	NA	NA	False	GATAAA	-5	NA	114281627	114301756	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_114281847_114282020_114282128_114286518_114286630_114291488_114291545_114291633_114291793_114298839_114299001_114301730
H1_mix_00023737	chr13	+	2500	10	NNC	ENSG00000169062.15	novel	2235	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_4	180.482070516098	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGAAATATTCTTTGAA	-6	True	NA	-1	True	AATAAA	-16	NA	114281627	114305808	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_114281847_114282020_114282128_114282836_114282944_114284093_114284359_114286518_114286630_114291488_114291545_114291633_114291793_114298839_114299001_114301730_114302026_114304788
H1_mix_00023739	chr13	+	937	8	FSM	ENSG00000169062.15	ENST00000493727.5	937	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	148.30924668766	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGGATGTGGAGAGATCT	276	False	NA	NA	False	GATAAA	-5	NA	114281952	114301756	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_114282128_114282836_114282944_114286258_114286401_114286518_114286630_114291488_114291545_114291633_114291793_114298839_114299001_114301730
H1_mix_00023743	chr13	-	1031	1	FSM	ENSG00000215349.2	ENST00000400109.2	1033	1	71	-69	71	69	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCAGAAATCATACTCTC	NA	False	NA	NA	False	AATATA	-5	NA	19305554	19304523	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_19304500_19305600
H1_mix_00023744	chr13	-	235	1	FSM	ENSG00000215572.2	ENST00000400596.2	1257	1	1160	-138	1160	138	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCCCCACTCCCTCCCC	4743	False	NA	NA	False	NA	NA	NA	19560109	19559874	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_19559900_19560100
H1_mix_00023745	chr13	-	443	2	FSM	ENSG00000121390.19	ENST00000497722.2	448	2	0	5	0	-1	multi-exon	FALSE	canonical	3	61	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTAGCCTTTGTCATTTTG	4547	False	NA	-22	True	ATTAAA	-13	NA	19677938	19674756	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_19674985_19677723
H1_mix_00023746	chr13	-	2284	2	FSM	ENSG00000121390.19	ENST00000635251.1	2285	2	0	1	0	-1	multi-exon	FALSE	canonical	3	31	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTAGCCTTTGTCATTTTG	3375	False	NA	-22	True	ATTAAA	-13	NA	19679110	19674756	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_19675654_19677723
H1_mix_00023747	chr13	-	273	1	FSM	ENSG00000233469.1	ENST00000435385.1	499	1	92	134	92	-134	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTCCAGAAGAGCTGGC	NA	False	NA	NA	False	NA	NA	NA	19818527	19818254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_19818300_19818500
H1_mix_00023748	chr13	-	2861	5	FSM	ENSG00000132950.19	ENST00000382909.5	2861	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	8.5841423566947	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAAGTGTTATGGGCTT	286	False	NA	NA	False	ATTAAA	-21	NA	19851796	19823481	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_19825236_19835476_19835690_19837655_19837822_19838699_19838986_19851354
H1_mix_00023751	chr13	-	5149	2	FSM	ENSG00000121743.4	ENST00000241125.4	5214	2	17	48	17	-48	multi-exon	FALSE	canonical	2	5	junction_1	0	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAGTAAGCATTTTCTA	9882	False	NA	NA	False	NA	NA	NA	20161035	20138302	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_20143306_20160889
H1_mix_00023754	chr13	-	871	6	NNC	ENSG00000150456.11	novel	1054	5	NA	NA	0	5082	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	26.7805899860328	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGTCCTTTTTAATGTAT	-9	True	NA	NA	False	NA	NA	NA	20773958	20723648	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_20723670_20728931_20729217_20731840_20732122_20737722_20737806_20757454_20757618_20773920
H1_mix_00023756	chr13	-	5325	7	NIC	ENSG00000150457.9	novel	5546	8	NA	NA	36	-2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	15.3233663258292	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCCGTAGTTGGTGTCAT	-2	True	NA	-8	True	ATTAAA	-13	NA	21061550	20973037	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_20975365_20979690_20979798_20983223_20983807_20987880_20989305_20991271_20991405_21045684_21046231_21061345
H1_mix_00023757	chr13	-	1356	9	NIC	ENSG00000165480.16	novel	2869	9	NA	NA	44	-315	combination_of_known_junctions	FALSE	canonical	3	71	junction_8	146.477814019735	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCATAATATGCTTTTTA	954	False	NA	-17	True	TTTAAA	-35	NA	21176429	21155011	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_21155151_21155692_21155812_21157921_21158126_21159901_21159988_21161789_21161876_21167987_21168400_21172338_21172505_21172619_21172682_21176347
H1_mix_00023759	chr13	-	5355	13	FSM	ENSG00000180776.16	ENST00000400590.8	5355	13	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	82.5198208513163	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTTCTTTGTTATAAAG	9	True	NA	-6	True	AATAAA	-19	NA	21459303	21372570	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_21376656_21378660_21378739_21381433_21381550_21382919_21383010_21387507_21387635_21391721_21391855_21400372_21400494_21401652_21401686_21402796_21402867_21413651_21413773_21421060_21421165_21425651_21425679_21459053
H1_mix_00023761	chr13	-	616	1	FSM	ENSG00000226525.5	ENST00000464254.1	603	1	0	-13	0	13	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACATTTATCTTCTCTCT	44	False	NA	NA	False	CATAAA	-13	NA	21629015	21628399	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_21628400_21629000
H1_mix_00023763	chr13	-	2977	9	FSM	ENSG00000151835.17	ENST00000683367.1	3037	9	60	0	3	0	multi-exon	FALSE	canonical	2	6	junction_1	12.7223965902655	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACTTTTAATAAAGGAAAAT	7	True	NA	-39	True	TATAAA	-7	NA	23375540	23328861	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_23329485_23353784_23353877_23354518_23356008_23358334_23358482_23365165_23365278_23368401_23368488_23371077_23371166_23375118_23375270_23375351
H1_mix_00023764	chr13	-	3910	11	FSM	ENSG00000151835.17	ENST00000683489.1	3954	11	44	0	-6	0	multi-exon	FALSE	canonical	2	3	junction_1	13.2548104475319	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCCACATTTTATTGCTT	-4	True	NA	-106	True	NA	NA	NA	23433708	23328928	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_23329953_23341584_23341691_23353784_23353877_23354518_23356008_23358334_23358482_23365165_23365278_23368401_23368488_23371077_23371166_23375118_23375270_23411219_23411741_23433614
H1_mix_00023765	chr13	-	4298	18	FSM	ENSG00000151849.16	ENST00000545981.6	4298	18	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	46.7930731572712	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGAAGTAACAGTAACTG	32	True	NA	NA	False	NA	NA	NA	24922810	24883162	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_24883370_24883962_24884084_24884160_24884246_24884322_24884464_24885275_24885387_24885605_24885671_24886234_24886386_24889315_24889401_24892642_24892868_24899418_24899585_24903925_24904059_24905345_24906961_24907090_24907194_24908017_24908127_24909789_24910087_24911945_24912070_24912581_24913092_24922760
H1_mix_00023767	chr13	-	338	1	FSM	ENSG00000260509.2	ENST00000568856.2	1315	1	622	355	622	-355	mono-exon	FALSE	NA	NA	NA	NA	NA	2867	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTAATTCAGTACTTTAA	NA	False	NA	NA	False	NA	NA	NA	25300816	25300478	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_25300500_25300800
H1_mix_00023768	chr13	-	6197	2	NIC	ENSG00000127870.17	novel	3282	5	NA	NA	1857	-13	intron_retention	FALSE	canonical	3	125	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACATTAAAACAAAGACTGTA	2456	False	NA	-33	True	TATAAA	-38	NA	26219834	26212787	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_26218607_26219456
H1_mix_00023770	chr13	-	1675	8	NIC	ENSG00000152484.14	novel	4412	9	NA	NA	13	-2510	combination_of_known_splicesites	FALSE	canonical	2	8	junction_6	69.78129098425	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGTTTCCCCAAGGGG	13	False	NA	NA	False	AATATA	-40	NA	27171798	27068665	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_27069385_27071070_27071150_27075190_27075389_27089882_27089967_27090081_27090159_27095600_27095831_27116515_27116597_27171591
H1_mix_00023773	chr13	-	5107	10	NNC	ENSG00000139517.9	novel	4750	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_9	27.9156578037718	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGACGTTGTCTCTTTTC	38	True	NA	-5	True	AATAAA	-18	NA	27620529	27545912	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_27548471_27550332_27550492_27553207_27553440_27556235_27556414_27559841_27559986_27562412_27562782_27567639_27567840_27569028_27569277_27581296_27581804_27620017
H1_mix_00023774	chr13	-	652	5	ISM	ENSG00000122025.15	ENST00000380987.2	3634	25	21	48954	5	-48621	5prime_fragment	FALSE	canonical	2	5	junction_1	2.73861278752583	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCGATTCACAGGGGGA	12	True	NA	NA	False	NA	NA	NA	28100571	28052567	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr13_-_28052675_28057346_28057463_28061866_28062070_28070490_28070613_28100467
H1_mix_00023775	chr13	-	1351	1	FSM	ENSG00000261485.1	ENST00000563843.1	1351	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTCCTCTCAGTTAA	1021	False	NA	NA	False	ATTAAA	-18	NA	28138193	28136842	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_28136800_28138200
H1_mix_00023776	chr13	-	6356	14	FSM	ENSG00000102755.12	ENST00000639477.1	6337	14	0	-19	0	0	multi-exon	FALSE	canonical	2	7	junction_1	46.5659804207361	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCCTGTTTGGTCTGCTG	134	False	NA	82	True	AATAAA	-20	NA	28495145	28385547	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_28389633_28389795_28390105_28396959_28397069_28405779_28405895_28427158_28427319_28427751_28427922_28430049_28430168_28431135_28431311_28433818_28433956_28434057_28434221_28438220_28438346_28466902_28467130_28467520_28467618_28494779
H1_mix_00023777	chr13	-	726	3	FSM	ENSG00000139514.13	ENST00000473577.1	726	3	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	11.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGATATTCGGCATCTATT	3892	False	NA	NA	False	NA	NA	NA	29519510	29516866	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_29517311_29517572_29517791_29519446
H1_mix_00023778	chr13	-	1617	11	FSM	ENSG00000102781.14	ENST00000380617.7	1634	11	17	0	17	0	multi-exon	FALSE	canonical	3	10	junction_10	5.11957029446808	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTTTAAAAAACAAGTTT	1	True	NA	-32	True	GATAAA	-19	NA	30307009	30208479	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_30208739_30210315_30210443_30227411_30227547_30230467_30230595_30231313_30231473_30240459_30240566_30240958_30241087_30255446_30255616_30280062_30280224_30283615_30283792_30306939
H1_mix_00023779	chr13	-	227	2	FSM	ENSG00000225039.2	ENST00000420694.2	1642	2	14	1401	14	-1401	multi-exon	FALSE	canonical	2	2	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCATTTTCTCCAGCATGG	12	True	NA	NA	False	GGGGCT	-39	NA	30422237	30419739	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_30419946_30422216
H1_mix_00023780	chr13	-	2319	5	FSM	ENSG00000189403.15	ENST00000339872.8	2319	5	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_4	5239.33342014993	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTAGTTAAATGGCTTTCA	-8	True	NA	-42	True	AATAAA	-24	NA	30464310	30459849	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_30461534_30462537_30462713_30463206_30463353_30463530_30463695_30464160
H1_mix_00023781	chr13	-	1248	5	FSM	ENSG00000189403.15	ENST00000399494.5	1282	5	46	-12	46	0	multi-exon	FALSE	canonical	0	0	junction_4	5246.2312663473	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTGTTGTCCTTTTCATA	739	False	NA	-35	True	AGTAAA	-18	NA	30465196	30460894	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_30461534_30462537_30462713_30463206_30463353_30463530_30463695_30465072
H1_mix_00023785	chr13	-	957	1	FSM	ENSG00000279314.1	ENST00000624392.1	1622	1	736	-71	736	71	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGAGGATGGTGACC	NA	False	NA	NA	False	NA	NA	NA	31961210	31960253	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_31960300_31961200
H1_mix_00023787	chr13	-	392	1	FSM	ENSG00000180660.8	ENST00000379919.6	2901	1	1846	663	1846	-663	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAGTTTACATTTTG	3806	False	NA	NA	False	NA	NA	NA	35474843	35474451	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_35474500_35474800
H1_mix_00023789	chr13	-	5899	7	FSM	ENSG00000242715.8	ENST00000379864.6	5944	7	0	45	0	-45	multi-exon	FALSE	canonical	3	19	junction_1	89.1267823571194	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTAAAATAAAAGCAAAGAA	1	True	NA	NA	False	AGTAAA	-10	NA	36297824	36222052	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_36227382_36248605_36248683_36253802_36253857_36254044_36254144_36283468_36283510_36283591_36283703_36297636
H1_mix_00023794	chr13	-	4089	3	NIC	ENSG00000242715.8	novel	887	3	NA	NA	-426	-2	combination_of_known_junctions	FALSE	canonical	3	103	junction_1	80.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAGTTGTATAGTATTTC	NA	False	NA	-15	True	AATAAA	-15	NA	36298266	36280058	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_36283407_36283591_36283703_36297636
H1_mix_00023795	chr13	-	1383	3	NIC	ENSG00000242715.8	novel	1632	5	NA	NA	42	-3	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	122.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCAGTTGTATAGTATTT	118	False	NA	-16	True	AATAAA	-14	NA	36297707	36280059	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_36281261_36283591_36283703_36297636
H1_mix_00023800	chr13	-	6742	4	ISM	ENSG00000120693.14	ENST00000379826.5	5558	7	52861	-2169	12407	2169	3prime_fragment	FALSE	canonical	3	6	junction_1	1.24721912892465	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAACCCAGGAGGCGGAG	5475	False	NA	NA	False	NA	NA	NA	36867377	36842661	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr13_-_36848820_36853418_36853676_36865536_36865759_36867272
H1_mix_00023801	chr13	-	960	8	FSM	ENSG00000120697.10	ENST00000679673.1	960	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_7	142.577154193648	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTCTTTTGTTTGTTTA	30	True	NA	1	True	TATAAA	-33	NA	36999300	36949737	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36999234
H1_mix_00023805	chr13	-	1092	10	NIC	ENSG00000120697.10	novel	1219	10	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	2	2	junction_8	130.158687572583	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTCATTGTCTGCCTTT	2	True	NA	-24	True	AATAAA	-3	NA	36999328	36949850	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_36950058_36952513_36952600_36965574_36965727_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36994988_36995036_36995426_36995597_36999234
H1_mix_00023807	chr13	-	1073	10	FSM	ENSG00000120697.10	ENST00000681214.1	1071	10	0	-2	0	0	multi-exon	FALSE	canonical	2	3	junction_4	188.805014057713	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCAGTTGTGTTCTTATG	30	True	NA	-104	True	AATGAA	-16	NA	36999300	36949930	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36967671_36967808_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36995426_36995597_36999234
H1_mix_00023809	chr13	-	1314	12	FSM	ENSG00000102710.21	ENST00000469488.6	1313	12	0	-1	0	0	multi-exon	FALSE	canonical	3	50	junction_4	208.422250997209	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGTTGGTTTGCCTAAGT	NA	False	NA	96	True	AATAAA	-24	NA	37026798	37009492	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_37009810_37010551_37010656_37012191_37012298_37017244_37017329_37019341_37019398_37021447_37021603_37022010_37022081_37024034_37024194_37024339_37024443_37025319_37025438_37026203_37026237_37026789
H1_mix_00023810	chr13	-	2682	25	FSM	ENSG00000102710.21	ENST00000356185.7	2681	25	0	-1	0	0	multi-exon	FALSE	canonical	3	114	junction_20	139.417812308503	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGTTGGTTTGCCTAAGT	4	True	NA	96	True	AATAAA	-24	NA	37059650	37009492	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_37009810_37012191_37012298_37017244_37017365_37019341_37019398_37021447_37021603_37022010_37022081_37024034_37024194_37024339_37024443_37025319_37025438_37026203_37026237_37026789_37026817_37028147_37028306_37029764_37029837_37031566_37031624_37031738_37031896_37033448_37033589_37040404_37040459_37040575_37040693_37044077_37044182_37045246_37045377_37047534_37047602_37047877_37047937_37048563_37048600_37051487_37051584_37059479
H1_mix_00023811	chr13	-	723	2	FSM	ENSG00000102710.21	ENST00000472948.1	617	2	-338	232	-338	-109	multi-exon	FALSE	canonical	3	152	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCCAGTCAAAAAGTAAAAT	409	False	NA	NA	False	NA	NA	NA	37011190	37009725	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_37009810_37010551
H1_mix_00023817	chr13	-	2955	12	FSM	ENSG00000133107.15	ENST00000358477.6	2955	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	35.4435880503695	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCGTAGTGCTCTGGGTG	10	False	NA	NA	False	NA	NA	NA	37869802	37636864	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_37637232_37637483_37637626_37639039_37639130_37639257_37639300_37651264_37651460_37655087_37655284_37663415_37663730_37674227_37674368_37691998_37692336_37745936_37746456_37782955_37783361_37869594
H1_mix_00023819	chr13	-	2081	12	NIC	ENSG00000120685.20	novel	5182	13	NA	NA	21	-6	combination_of_known_splicesites	FALSE	canonical	3	31	junction_2	157.264844784073	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAGTGTTTGGAGACT	25	True	NA	-10	True	AATAAA	-19	NA	39038055	39011145	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_39011488_39012082_39012234_39017499_39017545_39022325_39022413_39023051_39023131_39024472_39024557_39026276_39026388_39028226_39028321_39029280_39029376_39031562_39031632_39034130_39034197_39037197
H1_mix_00023820	chr13	-	801	2	FSM	ENSG00000102738.8	ENST00000498078.1	782	2	0	-19	0	19	multi-exon	FALSE	canonical	3	618	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGATTTGGCTGGTATA	9441	False	NA	13	True	AATAAA	-41	NA	40749613	40729276	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_40729602_40749137
H1_mix_00023821	chr13	-	449	1	FSM	ENSG00000215482.3	ENST00000400429.3	449	1	112	-112	112	112	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGGGGCTCGGTGGCTCA	193	False	NA	NA	False	NA	NA	NA	41171036	41170587	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_41170600_41171000
H1_mix_00023823	chr13	-	311	1	FSM	ENSG00000277662.1	ENST00000614652.1	497	1	139	47	139	-47	mono-exon	FALSE	NA	NA	NA	NA	NA	827	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTACAATTATTACATGTCA	NA	False	NA	NA	False	CATAAA	-3	NA	41229537	41229226	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_41229200_41229500
H1_mix_00023824	chr13	-	1853	7	NIC	ENSG00000120662.16	novel	1948	12	NA	NA	0	470	combination_of_known_junctions	FALSE	canonical	3	22	junction_6	34.7403064017704	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCATTTGTCTCATTCT	251	False	NA	-6	True	TTTAAA	-36	NA	41263547	41251811	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_41252753_41252948_41253031_41254528_41254621_41260492_41260916_41261690_41261826_41262214_41262332_41263484
H1_mix_00023826	chr13	-	271	1	FSM	ENSG00000214222.2	ENST00000454403.1	411	1	28	112	28	-112	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTCGGCAGGAAGGCCT	NA	False	NA	NA	False	NA	NA	NA	41385155	41384884	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_41384900_41385200
H1_mix_00023827	chr13	-	817	1	FSM	ENSG00000237263.1	ENST00000403865.2	2162	1	-163	1508	-163	-1508	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCATCTCTGCTGAAATG	NA	False	NA	NA	False	ACTAAA	-23	NA	42071256	42070439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_42070400_42071300
H1_mix_00023828	chr13	-	2555	3	NNC	ENSG00000229546.1	novel	227	2	NA	NA	0	2642	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_2	5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGACTTCCTGTTTTCT	NA	False	NA	NA	False	NA	NA	NA	42842887	42839771	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_42842100_42842413_42842552_42842798
H1_mix_00023829	chr13	-	1477	4	Intergenic	novelGene_352	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	43	junction_2	257.853102021717	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTACTTGTGTAATTGAGT	3319	False	NA	-4	True	AATAAA	-33	NA	42872801	42849696	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_-_42850693_42862087_42862166_42870600_42870760_42872557
H1_mix_00023830	chr13	-	3485	5	Intergenic	novelGene_358	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	90	junction_3	222.713240513446	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAAAAATAGTACTTGTG	3386	False	NA	-13	True	AATAAA	-24	NA	42872734	42849705	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_-_42850693_42862087_42862166_42865676_42867818_42870600_42870703_42872557
H1_mix_00023831	chr13	-	3160	7	Intergenic	novelGene_359	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_4	17.0465050181359	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TACAGAAGTACAAAAAAATA	3397	False	NA	-22	True	AATAAA	-15	NA	42872723	42849714	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_-_42850693_42851288_42851502_42862087_42862166_42862603_42862737_42865676_42865810_42866358_42867818_42872557
H1_mix_00023832	chr13	-	2984	7	Intergenic	novelGene_360	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	32	junction_1	55.0709138797928	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTACCAGCAATTGCACT	3339	False	NA	NA	False	NA	NA	NA	42872781	42849917	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_-_42850693_42851288_42851502_42862087_42862166_42865676_42865810_42866358_42867818_42870600_42870703_42872557
H1_mix_00023833	chr13	-	2324	1	Intergenic	novelGene_361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAACCTCTTAAAACTCC	3308	False	NA	NA	False	NA	NA	NA	42872812	42870488	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_-_42870500_42872800
H1_mix_00023834	chr13	-	3154	13	FSM	ENSG00000133106.15	ENST00000313640.11	3160	13	0	6	0	-6	multi-exon	FALSE	canonical	3	23	junction_6	80.3580096955009	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTACCACTTTTTCCTTT	11	True	NA	-8	True	AATAAA	-35	NA	42992230	42886393	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_42888503_42889210_42889243_42895008_42895109_42900309_42900384_42917540_42917625_42919299_42919333_42926335_42926430_42953947_42954022_42963254_42963339_42964065_42964140_42969093_42969178_42970611_42970671_42991977
H1_mix_00023835	chr13	-	518	1	FSM	ENSG00000277831.1	ENST00000613838.1	513	1	-14	9	-14	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCGCTTCAATCAGCCAG	4555	False	NA	NA	False	AATAAA	-3	NA	44369891	44369373	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_44369400_44369900
H1_mix_00023836	chr13	-	1522	3	FSM	ENSG00000237361.4	ENST00000660135.2	2363	3	271	570	270	-570	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTGCCTTTATTAAATG	9210	False	NA	NA	False	AATAAA	-11	NA	44405683	44402097	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_44403330_44404391_44404612_44405613
H1_mix_00023837	chr13	-	2302	3	FSM	ENSG00000102804.15	ENST00000486464.1	1093	3	0	-1209	0	1209	multi-exon	FALSE	canonical	3	13	junction_1	4	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTCCATGAAAAAAATGCAC	4309	False	NA	NA	False	AATAAA	-6	NA	44573522	44537116	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_44538889_44539766_44539937_44573162
H1_mix_00023838	chr13	-	731	4	FSM	ENSG00000133112.17	ENST00000528619.5	731	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1747.96815379076	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAATAAAAAGAGACTCAT	1680	False	NA	-34	True	NA	NA	NA	45339533	45336898	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_45337389_45337466_45337554_45338659_45338777_45339496
H1_mix_00023841	chr13	-	3781	9	NNC	ENSG00000174032.17	novel	3663	10	NA	NA	3	-83	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	8.25284042012203	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTTATATTTCAAGCTCT	-7	True	NA	-3	True	TATAAA	-20	NA	45418370	45393416	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_45396319_45398939_45399079_45401082_45401208_45402274_45402371_45404326_45404413_45405882_45405978_45408926_45409075_45411361_45411481_45418299
H1_mix_00023842	chr13	-	2957	13	FSM	ENSG00000102445.20	ENST00000378797.6	3206	13	249	0	1	0	multi-exon	TRUE	canonical	1	1	junction_12	6.43072054024016	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTCATTCTTGCCCAT	-6	True	NA	NA	False	AATAAA	-19	NA	46387251	46341999	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_46343498_46344740_46344832_46345446_46345601_46349285_46349348_46350112_46350352_46356431_46356497_46359485_46359632_46361440_46361574_46362537_46362599_46363114_46363214_46368041_46368250_46368732_46368816_46387133
H1_mix_00023843	chr13	-	235	2	FSM	ENSG00000231817.9	ENST00000458282.2	558	2	323	0	323	0	multi-exon	FALSE	canonical	2	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCTTGTGGAGAAAATACC	9948	False	NA	NA	False	NA	NA	NA	46457915	46455352	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_46455512_46457839
H1_mix_00023844	chr13	-	2160	12	NNC	ENSG00000136143.16	novel	2111	11	NA	NA	0	1805	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	277.368090903117	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGAGTCTTTTCACATC	-10	True	NA	NA	False	NA	NA	NA	48001293	47903523	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_47903553_47942655_47943446_47948939_47949029_47949482_47949604_47954139_47954283_47954395_47954558_47968594_47968734_47973263_47973393_47988540_47988704_47988881_47988982_47996842_47997024_48001179
H1_mix_00023845	chr13	-	2450	1	Genic_Genomic	ENSG00000136143.16	novel	NA	NA	NA	NA	-32	3087	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATGGCAGTTAAACAATG	NA	False	NA	NA	False	NA	NA	NA	47935853	47933403	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr13_-_47933400_47935900
H1_mix_00023851	chr13	-	283	1	FSM	ENSG00000276968.1	ENST00000616786.1	434	1	76	75	76	-75	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATAAAATATTTTCCTTAA	NA	False	NA	NA	False	AGTAAA	-3	NA	48042108	48041825	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_48041800_48042100
H1_mix_00023852	chr13	-	2229	1	FSM	ENSG00000139679.16	ENST00000620633.5	1976	1	7	-260	7	167	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTAGTCTTCTGTAGAAAT	8	True	NA	NA	False	AATAAA	-39	NA	48413106	48410877	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_48410900_48413100
H1_mix_00023853	chr13	-	908	5	NNC	ENSG00000123179.14	novel	967	5	NA	NA	0	97900	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	475.268542510442	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGATGGTGGCACGCACCT	31	True	NA	NA	False	AAAAAG	-3	NA	49691438	49562773	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_49562807_49660727_49661209_49663056_49663196_49669776_49669847_49691253
H1_mix_00023854	chr13	-	2092	2	FSM	ENSG00000186047.11	ENST00000400393.3	2092	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAAAAAAAAAAAATC	NA	False	NA	NA	False	NA	NA	NA	50843939	50711900	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_50713241_50843187
H1_mix_00023855	chr13	-	13654	2	Antisense	novelGene_ENSG00000274652.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	169	junction_1	0	58	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGCCTCCAGGCCTGGG	NA	False	NA	NA	False	NA	NA	NA	51186397	51169581	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr13_-_51171636_51174797
H1_mix_00023856	chr13	-	690	4	FSM	ENSG00000102786.15	ENST00000476666.5	690	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	102.779159149876	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGTGTGCACTTTATG	NA	False	NA	NA	False	GATAAA	-14	NA	51369131	51354076	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_51354337_51365702_51365846_51367804_51367899_51368938
H1_mix_00023857	chr13	-	3894	19	NIC	ENSG00000102786.15	novel	3767	20	NA	NA	6	-1	combination_of_known_junctions	FALSE	canonical	2	6	junction_14	64.93462999694	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTTGTGTGGTTTAGGA	25	False	NA	-8	True	AATAAA	-11	NA	51453009	51365228	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_51365846_51367804_51367899_51368938_51369311_51374207_51374440_51374653_51374797_51376047_51376175_51378238_51378455_51379461_51379573_51382028_51382124_51383328_51383462_51383588_51383742_51387385_51387541_51389318_51389445_51395299_51395484_51421111_51421335_51430293_51430384_51451024_51451175_51451977_51452056_51452414
H1_mix_00023858	chr13	-	1010	8	NIC	ENSG00000102796.12	novel	1119	9	NA	NA	1	-9	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	37.0460276313845	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACCTTGAACTCCTGCAG	6	True	NA	-21	True	AATAAA	-23	NA	51804156	51768003	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_51768297_51769155_51769294_51773929_51774035_51777059_51777122_51790010_51790093_51791164_51791258_51799533_51799668_51804053
H1_mix_00023861	chr13	-	5943	8	FSM	ENSG00000123191.16	ENST00000673867.1	6613	8	681	-11	-246	0	multi-exon	FALSE	canonical	3	28	junction_6	3.23879544250132	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCTGTGAGTGAGATGC	NA	False	NA	0	True	AATAAA	-23	NA	51946809	51932668	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_51935030_51935592_51935696_51937275_51937394_51937475_51937680_51939050_51939194_51941080_51941225_51942385_51942555_51944108
H1_mix_00023864	chr13	-	1900	14	NIC	ENSG00000136098.17	novel	2128	16	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	2	11	junction_12	50.3899586127443	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTGTGCAGTTTTTCAA	-1	True	NA	-2	True	ATTAAA	-21	NA	52159593	52132641	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_52133227_52133688_52133816_52136115_52136260_52136799_52136903_52141019_52141070_52143914_52143988_52144690_52144892_52148414_52148470_52151145_52151233_52151324_52151393_52152608_52152693_52153894_52153993_52156074_52156249_52159542
H1_mix_00023866	chr13	-	4450	8	ISM	ENSG00000243406.6	ENST00000416599.5	3494	9	2668	0	2581	0	3prime_fragment	FALSE	canonical	3	35	junction_2	8.54758588665805	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTTGGTCTGTCATGT	2669	False	NA	-4	True	AATAAA	-18	NA	52191797	52167708	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr13_-_52169305_52169986_52170100_52171157_52171249_52175638_52175777_52180581_52180655_52183975_52184115_52186682_52186824_52189638
H1_mix_00023868	chr13	-	558	1	FSM	ENSG00000278238.1	ENST00000614364.1	557	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGTTTGTGTGGTTA	6	True	NA	0	True	GATAAA	-19	NA	52455331	52454773	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_52454800_52455300
H1_mix_00023869	chr13	-	1479	8	NNC	ENSG00000136110.13	novel	1455	7	NA	NA	0	43452	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	426.985589777396	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATATATATATATAT	-13	True	NA	NA	False	NA	NA	NA	52739812	52659811	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_52659844_52703263_52703811_52708535_52708703_52712715_52712870_52723996_52724111_52733218_52733360_52739030_52739172_52739629
H1_mix_00023870	chr13	-	1478	8	NNC	ENSG00000136110.13	novel	1455	7	NA	NA	0	43452	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	426.985589777396	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATATATATATATAT	-13	True	NA	NA	False	NA	NA	NA	52739812	52659811	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_52659843_52703263_52703811_52708535_52708703_52712715_52712870_52723996_52724111_52733218_52733360_52739030_52739172_52739629
H1_mix_00023872	chr13	-	1111	5	NIC	ENSG00000234787.8	novel	1060	5	NA	NA	8	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	698.375749507384	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGTGGCCTCTGCTCTGA	110	False	NA	-3	True	CATAAA	-23	NA	54132843	54115782	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_54116210_54120939_54121045_54127279_54127430_54130873_54131072_54132612
H1_mix_00023873	chr13	-	1060	5	FSM	ENSG00000234787.8	ENST00000423442.6	1060	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	141.871420659695	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGTGGCCTCTGCTCTGA	87	False	NA	-3	True	CATAAA	-23	NA	54132866	54115782	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_54116210_54120939_54121045_54125148_54125273_54127279_54127430_54132612
H1_mix_00023874	chr13	-	1353	3	FSM	ENSG00000234787.8	ENST00000607494.5	849	3	-15	-489	0	0	multi-exon	FALSE	canonical	3	269	junction_1	14.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTCAGGTTCTCTTTG	87	False	NA	-5	True	ATTAAA	-18	NA	54132866	54124323	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_54125273_54127279_54127430_54132612
H1_mix_00023875	chr13	-	527	3	Intergenic	novelGene_373	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_2	2.5	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACTACCTAGTGATGTCA	NA	False	NA	-9	True	ATTAAA	-11	NA	54269283	54245083	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_-_54245489_54268138_54268219_54269241
H1_mix_00023876	chr13	-	699	2	Genic_Genomic	ENSG00000136149.6	novel	612	1	NA	NA	-23	5871	multi-exon	FALSE	non_canonical	0	0	junction_1	0	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATGTTTTATAAGCACAG	-9	True	NA	NA	False	NA	NA	NA	54441338	54434832	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr13_-_54434855_54440661
H1_mix_00023877	chr13	-	6842	2	Intergenic	novelGene_377	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	301	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAAATTACATTGAGATT	5670	False	NA	-67	True	AATAAA	-14	NA	55577206	55570241	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_-_55576967_55577089
H1_mix_00023878	chr13	-	4765	27	NNC	ENSG00000139734.19	novel	3549	27	NA	NA	-61	-8	at_least_one_novel_splicesite	FALSE	non_canonical	3	39	junction_26	28.9512955632887	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAATGCTTTCTTTTG	NA	False	NA	NA	False	AATAAA	-21	NA	60163989	59665590	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_59666847_59774188_59774249_59774727_59774824_59810787_59810924_59833106_59833271_59839322_59839449_59861406_59861537_59879228_59879469_59911734_59911837_59916154_59916250_59924774_59924871_59969943_59970059_59970851_59971161_59974351_59974457_59980794_59980860_59983768_59983888_59991157_59991275_59992067_59992187_59992472_59992584_60008543_60008650_60010532_60010670_60015912_60015983_60016070_60016146_60042689_60042821_60093627_60093733_60112009_60112187_60163586
H1_mix_00023879	chr13	-	3444	26	FSM	ENSG00000139734.19	ENST00000400320.5	3444	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	51.4772804254459	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAAACTGGTTTTTAAAAA	4	True	NA	NA	False	NA	NA	NA	60163766	59666583	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_59666847_59774188_59774249_59774727_59774824_59810787_59810924_59833106_59833272_59839323_59839449_59861406_59861537_59879228_59879469_59911734_59911837_59916154_59916250_59924774_59924871_59969943_59970059_59970851_59971161_59974351_59974457_59980794_59980860_59983768_59983888_59991157_59991275_59992067_59992187_59992472_59992584_60008543_60008650_60010532_60010670_60015912_60015983_60016070_60016146_60042689_60042821_60112009_60112187_60163586
H1_mix_00023881	chr13	-	1801	2	FSM	ENSG00000139734.19	ENST00000615942.1	1800	2	0	-1	0	1	multi-exon	FALSE	canonical	3	160	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTCATCATTCTTAGC	NA	False	NA	NA	False	AATAAA	-17	NA	59861432	59837673	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_59839449_59861406
H1_mix_00023882	chr13	-	1521	1	FSM	ENSG00000265745.2	ENST00000492442.3	298	1	-166	-1057	-166	1057	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAATTACCCAGATGCAG	NA	False	NA	NA	False	ATTAAA	-12	NA	60034928	60033407	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_60033400_60034900
H1_mix_00023883	chr13	-	286	1	Intergenic	novelGene_404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCACCTGGCAGCCACTC	1729	False	NA	NA	False	AATGAA	-14	NA	66144978	66144692	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_-_66144700_66145000
H1_mix_00023884	chr13	-	207	2	Antisense	novelGene_ENSG00000263561.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGATTTGTTCCTGCCCC	NA	False	NA	NA	False	NA	NA	NA	66226889	66146898	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr13_-_66146963_66226746
H1_mix_00023885	chr13	-	27801	2	FSM	ENSG00000184226.15	ENST00000377861.4	28227	2	258	168	149	-168	multi-exon	FALSE	canonical	1	2	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATAAAATTGTATATATTG	195	False	NA	NA	False	TTTAAA	-38	NA	67230187	67201182	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_67228576_67229779
H1_mix_00023886	chr13	-	2893	9	NNC	ENSG00000118922.18	novel	10832	8	NA	NA	-969	-8236	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	18.9456459377874	46	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTTGAGTACCACAATTAA	NA	False	NA	-46	True	NA	NA	NA	74134898	73694324	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_73695672_73715367_73715526_73764937_73765001_73813151_73813288_73845826_73846374_73943980_73944071_73994989_73995054_74133971_74134157_74134595
H1_mix_00023891	chr13	-	5676	4	ISM	ENSG00000005812.11	ENST00000355619.10	3506	5	2795	0	2721	0	3prime_fragment	FALSE	canonical	3	80	junction_2	13.9283882771841	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTATTTTACTTTTTAAA	2831	False	NA	-10	True	AATAAA	-15	NA	77024364	77005259	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr13_-_77007789_77015408_77015581_77018599_77018723_77021512
H1_mix_00023900	chr13	-	1766	6	NIC	ENSG00000136160.17	novel	4300	7	NA	NA	14	319	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	139.079257979039	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTTTCTAAAAAGAGATTT	800	False	NA	NA	False	NA	NA	NA	77918817	77897872	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_77898335_77899858_77899968_77901057_77901208_77903155_77903361_77903494_77903608_77918090
H1_mix_00023901	chr13	-	4920	23	NNC	ENSG00000139746.16	novel	3624	21	NA	NA	28	-2751	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	54.5762980977053	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGTTTGGTTTTAATTT	31	True	NA	-5	True	ATTAAA	-9	NA	79406193	79314574	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_79314991_79318820_79318877_79319534_79320711_79322348_79322463_79334343_79334431_79337101_79337303_79341122_79341228_79342663_79342832_79344247_79344323_79344668_79344795_79354438_79354562_79355219_79355385_79358273_79358434_79359574_79359687_79365577_79365719_79366054_79366196_79366632_79366873_79368729_79368991_79370944_79371163_79371841_79371931_79377378_79377516_79378788_79378908_79405703
H1_mix_00023903	chr13	-	4072	22	NNC	ENSG00000139746.16	novel	5258	22	NA	NA	48	-48	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_9	51.015848322314	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGGAAAGAAAAGAGA	51	False	NA	NA	False	AATAAA	-23	NA	79406173	79320001	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_79320711_79322348_79322463_79334343_79334431_79337101_79337303_79341122_79341228_79342663_79342832_79344247_79344323_79344668_79344795_79353152_79353225_79354438_79354571_79355219_79355385_79358273_79358434_79359574_79359687_79365577_79365719_79366054_79366226_79366632_79366873_79368729_79368991_79370944_79371163_79371841_79371931_79377378_79377516_79378788_79378908_79405703
H1_mix_00023907	chr13	-	3863	30	FSM	ENSG00000125257.16	ENST00000646439.1	3863	30	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_15	45.3217589150442	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTCCGAAGGCATTTTCCA	490	False	NA	NA	False	NA	NA	NA	95301319	95021553	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_95021683_95034604_95034740_95043681_95043788_95044265_95044439_95053094_95053185_95062703_95062860_95071661_95071854_95073203_95073305_95074213_95074325_95075431_95075552_95083139_95083291_95115921_95116002_95161188_95161336_95163121_95163217_95163609_95163648_95166157_95166368_95170531_95170629_95177706_95177794_95177996_95178092_95186700_95186893_95188452_95188543_95194835_95194938_95206531_95206782_95207799_95207926_95209433_95209598_95210691_95210782_95234609_95234835_95246974_95247096_95247642_95247754_95301240
H1_mix_00023909	chr13	-	3467	23	FSM	ENSG00000125257.16	ENST00000643816.1	3480	23	0	13	0	-13	multi-exon	FALSE	canonical	2	7	junction_22	58.5909796177021	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGCAAATGGCTGTGACT	4	True	NA	-51	True	NA	NA	NA	95301444	95075053	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_95075552_95083139_95083291_95115921_95116002_95161188_95161336_95163121_95163217_95163609_95163648_95164377_95164519_95166157_95166368_95170531_95170629_95177706_95177794_95177996_95178092_95186700_95186893_95188452_95188543_95194835_95194938_95206531_95206782_95207799_95207926_95209433_95209598_95210691_95210782_95234609_95234835_95246974_95247096_95247642_95247754_95266111_95266265_95301240
H1_mix_00023921	chr13	-	4509	9	NIC	ENSG00000102595.21	novel	1547	10	NA	NA	19	-1036	intron_retention	FALSE	canonical	2	13	junction_1	59.3148379412774	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTCTAAAATCATGCAT	22	True	NA	NA	False	AAAAAG	-9	NA	96053374	95986082	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_95989599_95989972_95990074_95996062_95996136_95999210_95999308_96013306_96013482_96023039_96023153_96023628_96023760_96031888_96031972_96053154
H1_mix_00023934	chr13	-	2930	15	ISM	ENSG00000125247.16	ENST00000342624.10	3911	19	-78	21153	6	132	5prime_fragment	FALSE	canonical	3	137	junction_9	13.402710660953	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTGTTCATTCTAACCA	NA	False	NA	NA	False	AATAAA	-17	NA	100674873	100624777	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr13_-_100625677_100625784_100625893_100626070_100626151_100634804_100634937_100635023_100635196_100636531_100636735_100637537_100637703_100637929_100638023_100642210_100642312_100656380_100656469_100662963_100663181_100664220_100664337_100668578_100668795_100670359_100670570_100674743
H1_mix_00023943	chr13	-	1491	8	FSM	ENSG00000134905.17	ENST00000540006.5	1485	8	0	-6	0	6	multi-exon	FALSE	canonical	2	2	junction_4	125.079892835886	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCGTCTGTTTGTTAGTAA	1888	False	NA	2	True	ATTAAA	-25	NA	110663861	110641405	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_110641609_110642314_110642522_110644064_110644183_110644384_110644607_110645966_110646091_110647100_110647240_110651033_110651101_110663450
H1_mix_00023951	chr13	-	2101	4	NIC	ENSG00000088448.14	novel	1193	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	44	junction_1	260.96104434698	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTTTAATTT	118	False	110915091	0	True	ATTAAA	-24	NA	110915069	110892691	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_110894203_110906032_110906125_110910617_110910771_110914724
H1_mix_00023952	chr13	-	1157	5	NNC	ENSG00000088448.14	novel	1193	5	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	269.780466305476	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAATTTTTTTTTTTTTT	39	True	NA	-6	True	ATTAAA	-18	NA	110915006	110892697	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_110893264_110903475_110903540_110906032_110906125_110910617_110910771_110914724
H1_mix_00023954	chr13	-	6329	4	NIC	ENSG00000088448.14	novel	2495	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	169	junction_1	202.046749265829	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGACCGCTTTGCGGGTG	118	False	110915091	NA	False	AGTAAA	-18	NA	110915069	110893027	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_110893264_110900529_110906125_110910617_110910771_110914724
H1_mix_00023956	chr13	-	4111	23	FSM	ENSG00000126216.15	ENST00000649778.1	4111	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	65.8246637943284	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAAAAGCAATTATCTTT	NA	False	NA	-33	True	CATAAA	-35	NA	112588205	112485032	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_112486152_112489580_112489698_112499044_112499186_112504031_112504164_112504625_112504715_112516439_112516576_112518974_112519044_112519885_112520022_112521662_112521865_112522319_112522510_112526941_112527051_112527373_112527485_112545698_112545866_112547619_112547753_112548107_112548177_112554056_112554183_112554886_112555006_112556051_112556225_112558195_112558414_112559321_112559400_112565110_112565179_112569151_112569260_112587904
H1_mix_00023960	chr13	-	4202	8	FSM	ENSG00000126226.22	ENST00000493650.5	4202	8	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	209.192909701519	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTGTTGGTTAAAAAAAAA	8558	False	NA	-17	True	AATAAA	-20	NA	113188608	113177611	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_113178009_113178173_113178288_113178965_113179090_113179916_113180043_113180157_113180232_113181129_113181231_113184345_113184488_113185484
H1_mix_00023962	chr13	-	1827	14	NNC	ENSG00000126226.22	novel	1786	15	NA	NA	-6	0	intron_retention	FALSE	non_canonical	1	270	junction_10	144.490903872096	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTGTTGGTTAAAAAAAAA	-7	True	NA	-17	True	AATAAA	-20	NA	113208675	113177611	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_113178288_113178965_113179090_113179916_113180043_113180157_113180232_113181129_113181231_113184345_113184488_113185484_113185561_113190871_113190976_113195070_113195126_113196180_113196221_113197175_113197244_113198190_113198265_113200426_113200517_113208598
H1_mix_00023965	chr13	-	2566	8	NNC	ENSG00000139835.14	novel	1415	8	NA	NA	0	-49	intron_retention	FALSE	canonical	2	12	junction_3	148.715863858787	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCCAACACCTGTGTTTG	-19	True	NA	-52	True	AATAAA	-2	NA	113364130	113324212	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_113325847_113325918_113326092_113334428_113334547_113344862_113344960_113350848_113350974_113355322_113355482_113363761_113363911_113364019
H1_mix_00023971	chr13	+	231	1	Intergenic	novelGene_343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCCTCCACCCTATAATC	884	False	NA	NA	False	NA	NA	NA	34800137	34800368	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_34800100_34800400
H1_mix_00023972	chr13	+	341	1	Intergenic	novelGene_344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCACCCTAACCCACAAGT	1919	False	NA	NA	False	NA	NA	NA	34801172	34801513	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_34801200_34801500
H1_mix_00023973	chr13	+	201	1	Intergenic	novelGene_345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAAAATTTCTGTTATTT	NA	False	NA	NA	False	AAAACA	-35	NA	35310071	35310272	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_35310100_35310300
H1_mix_00023974	chr13	+	240	1	Intergenic	novelGene_347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAGGGATAGTAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	37971391	37971631	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_37971400_37971600
H1_mix_00023975	chr13	+	302	1	Intergenic	novelGene_363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGAGTTAAGACTGGTG	NA	False	NA	NA	False	AAGAAA	-12	NA	46829564	46829866	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_46829600_46829900
H1_mix_00023976	chr13	+	3493	1	Intergenic	novelGene_364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGAGTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	50446933	50450426	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_50446900_50450400
H1_mix_00023977	chr13	+	4383	1	Intergenic	novelGene_371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCTTATTGAAGCACAAAC	NA	False	NA	NA	False	AGTAAA	-10	NA	54101522	54105905	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_54101500_54105900
H1_mix_00023978	chr13	+	3635	1	Intergenic	novelGene_376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAGCATGCTCTGTAACA	NA	False	NA	NA	False	AATATA	-8	NA	55563254	55566889	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_55563300_55566900
H1_mix_00023979	chr13	+	713	1	Intergenic	novelGene_382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCCCTCAAACCCCAAAACA	NA	False	NA	NA	False	AATAAA	-20	NA	56041680	56042393	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_56041700_56042400
H1_mix_00023980	chr13	+	218	1	Intergenic	novelGene_386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAATGTGGGAGGCAGGA	NA	False	NA	NA	False	NA	NA	NA	56114063	56114281	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_56114100_56114300
H1_mix_00023981	chr13	+	680	1	Intergenic	novelGene_389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGCAAGCTCCTGGGGGA	NA	False	NA	NA	False	NA	NA	NA	56115196	56115876	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_56115200_56115900
H1_mix_00023982	chr13	+	1955	1	Intergenic	novelGene_391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	400	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGACATTTCCAGTATAC	NA	False	NA	NA	False	NA	NA	NA	59906439	59908394	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_59906400_59908400
H1_mix_00023983	chr13	+	3233	1	Intergenic	novelGene_392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGATTCCATTTATATGA	NA	False	NA	NA	False	AAAACA	-43	NA	60979342	60982575	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_60979300_60982600
H1_mix_00023984	chr13	+	265	1	Intergenic	novelGene_405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTATTGGGGTCAAGCGGC	NA	False	NA	NA	False	NA	NA	NA	66145413	66145678	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_66145400_66145700
H1_mix_00023985	chr13	+	251	1	Intergenic	novelGene_408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1144	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTAAGTCCGGTTGTGGGG	NA	False	NA	NA	False	NA	NA	NA	66229746	66229997	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_66229700_66230000
H1_mix_00023986	chr13	+	204	1	Intergenic	novelGene_409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATGCCTGGACGTCAGG	NA	False	NA	NA	False	NA	NA	NA	66230388	66230592	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_66230400_66230600
H1_mix_00023987	chr13	+	202	1	Intergenic	novelGene_410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACAGGGGATTGATCTCCC	NA	False	NA	NA	False	NA	NA	NA	66231630	66231832	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr13_+_66231600_66231800
H1_mix_00023990	chr13	+	7180	26	NNC	ENSG00000121741.17	novel	3456	19	NA	NA	226	0	at_least_one_novel_splicesite	FALSE	canonical	2	32	junction_1	107.040179372047	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTGGATTTCCCCCTT	8	False	NA	NA	False	AATAAA	-16	NA	19959008	20089115	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_19959136_19959957_19960027_19993062_19993565_19993825_19993920_20002849_20003136_20005073_20005240_20006373_20006587_20019546_20019619_20026611_20026763_20027202_20027319_20031318_20031436_20034253_20034405_20036736_20036910_20051432_20051599_20052276_20052312_20058574_20058705_20059446_20059563_20061052_20061225_20062845_20062972_20064450_20064546_20066850_20067020_20067238_20067391_20082015_20082131_20082780_20083033_20083655_20083777_20085821
H1_mix_00023995	chr13	+	4196	15	NIC	ENSG00000139496.16	novel	4236	16	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_6	47.2440472440709	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGGTGTCAGTAGCTGTT	9	True	NA	32	True	AATAAA	-29	NA	25301639	25342421	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_25301881_25307805_25307949_25309246_25309283_25312882_25313033_25313613_25313752_25315356_25315468_25320529_25320596_25320918_25321094_25324988_25325069_25326915_25327035_25327429_25327513_25331356_25331559_25336935_25337035_25338635_25338732_25339964
H1_mix_00023996	chr13	+	8716	36	FSM	ENSG00000132932.19	ENST00000684424.1	8756	36	31	9	31	0	multi-exon	FALSE	canonical	2	7	junction_17	3.35808497418954	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACACCAACAACAACAAAAAA	19	True	NA	NA	False	NA	NA	NA	25468868	26025102	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_25469122_25529998_25530099_25530561_25530661_25532271_25532318_25533272_25533314_25537987_25538062_25540318_25540389_25541918_25542047_25543290_25543403_25551337_25551504_25553792_25553921_25554990_25555069_25558972_25559062_25559720_25559766_25563955_25564032_25570766_25570873_25571609_25571693_25574807_25574858_25577068_25577139_25578814_25578900_25579807_25579948_25581818_25581958_25589634_25589700_25699172_25699346_25769045_25769230_25774848_25774960_25828117_25828193_25837162_25837286_25839545_25839625_25860194_25860257_25860803_25860861_25862300_25862409_25961574_25961664_25968574_25968680_26012530_26012623_26019887
H1_mix_00024027	chr13	+	7238	3	NNC	ENSG00000204977.10	novel	7255	2	NA	NA	5	0	intron_retention	FALSE	non_canonical	0	0	junction_2	144	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTAGTTTGGTAATTCT	250	False	NA	16	True	AATAAA	-17	NA	49997023	50018467	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_49997764_50011934_50015086_50015120
H1_mix_00024034	chr13	+	5345	3	Genic_Genomic	ENSG00000274652.1	novel	790	1	NA	NA	-10642	0	multi-exon	FALSE	canonical	3	78	junction_1	4.5	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGATGATGTCTCCAGA	NA	False	NA	5	True	AATAAA	-14	NA	51169535	51180967	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr13_+_51170463_51172316_51176044_51180276
H1_mix_00024037	chr13	+	10611	3	FSM	ENSG00000253710.5	ENST00000649651.2	10733	3	122	0	122	0	multi-exon	FALSE	canonical	3	166	junction_1	7	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCATATGCCAATTAAAGAA	2284	False	NA	-29	True	NA	NA	NA	52014686	52033540	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_52019144_52024005_52024938_52028318
H1_mix_00024038	chr13	+	6318	2	FSM	ENSG00000253710.5	ENST00000680058.1	6332	2	14	0	14	0	multi-exon	FALSE	canonical	3	180	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCATATGCCAATTAAAGAA	3375	False	NA	-29	True	NA	NA	NA	52023841	52033540	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_52024938_52028318
H1_mix_00024039	chr13	+	732	6	NIC	ENSG00000244471.6	novel	865	4	NA	NA	186	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_5	10.1271911209377	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCAGGTTTTTTTTCTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	52570338	52587095	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_52570467_52571231_52571294_52579343_52579436_52583095_52583189_52584632_52584704_52586809
H1_mix_00024071	chr13	+	9145	30	NIC	ENSG00000068650.19	novel	9086	30	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	2	7	junction_29	26.1319254314309	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGTGTACATTTTCTG	-1	True	NA	32	True	AATAAA	-44	NA	112690037	112887167	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_112690456_112785134_112785258_112804956_112805047_112806212_112806294_112810618_112810727_112816082_112816212_112819303_112819408_112819899_112819951_112823344_112823410_112824343_112824426_112825429_112825581_112826693_112826892_112831374_112831549_112832859_112833024_112834588_112834661_112836177_112836252_112842275_112842380_112851036_112851219_112854278_112854531_112855910_112856086_112857817_112857921_112858144_112858291_112859392_112859453_112860286_112860415_112862439_112862576_112871734_112871801_112873572_112873677_112875775_112875942_112878216_112878304_112881815
H1_mix_00024072	chr13	+	3590	24	ISM	ENSG00000068650.19	ENST00000375645.8	9086	30	28	26370	28	0	5prime_fragment	FALSE	canonical	3	80	junction_9	11.7241450246722	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTTCAGGGTGTCTTT	-8	True	NA	9	True	TTTAAA	-45	NA	112690065	112860798	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr13_+_112690456_112785134_112785258_112804956_112805047_112806212_112806294_112810618_112810727_112816082_112816212_112819303_112819408_112819899_112819951_112823344_112823410_112824343_112824426_112825429_112825581_112826693_112826892_112831374_112831549_112832859_112833024_112834588_112834661_112836177_112836252_112842275_112842380_112851036_112851219_112854278_112854531_112855910_112856086_112857817_112857921_112858144_112858291_112859392_112859453_112860286
H1_mix_00024078	chr13	+	2227	17	NIC	ENSG00000130177.16	novel	2211	19	NA	NA	1	0	intron_retention	FALSE	canonical	3	56	junction_1	89.1290321668535	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTATGTCTTTTTTTTTCT	13	True	NA	14	True	AATAAA	-15	NA	114234897	114272675	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_+_114235133_114236798_114236897_114238989_114239029_114239349_114239491_114242120_114242281_114243256_114243349_114243855_114243990_114244889_114244970_114245999_114246050_114246930_114247005_114250548_114250675_114257077_114257231_114259334_114259399_114261886_114261949_114262878_114263015_114265149_114265241_114272183
H1_mix_00024079	chr13	+	2187	18	ISM	ENSG00000130177.16	ENST00000252457.9	2034	19	-71	0	11	0	intron_retention	FALSE	canonical	3	59	junction_2	85.9068861010849	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTATGTCTTTTTTTTTCT	43	False	NA	14	True	AATAAA	-15	NA	114234989	114272675	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr13_+_114235133_114236644_114236700_114236801_114236897_114238989_114239029_114239349_114239491_114242120_114242281_114243256_114243349_114243855_114243990_114244889_114244970_114245999_114246050_114246930_114247005_114250548_114250675_114257077_114257231_114259334_114259399_114261886_114261949_114262878_114263015_114265149_114265241_114272183
H1_mix_00024082	chr13	+	1468	4	NNC	ENSG00000169062.15	novel	937	8	NA	NA	0	196	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_3	182.852095664471	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAATAAAGCTTTTTTTCC	276	False	NA	45	True	AAAAAG	-44	NA	114281952	114287813	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_114282128_114282836_114282944_114286518_114286630_114286738
H1_mix_00024084	chr13	+	693	4	NNC	ENSG00000169062.15	novel	937	8	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_3	176.620748749655	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCCACATTGTTTATCAT	281	False	NA	3	True	AATAAA	-15	NA	114281957	114287617	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_+_114282128_114282836_114282944_114286518_114286630_114287312
H1_mix_00024085	chr13	+	2423	2	FSM	ENSG00000169062.15	ENST00000619079.1	2423	2	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCCACATTGTTTATCAT	2664	False	NA	3	True	AATAAA	-15	NA	114285076	114287617	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_+_114286401_114286518
H1_mix_00024102	chr13	-	1932	2	FSM	ENSG00000139508.15	ENST00000475385.1	2133	2	185	16	185	0	multi-exon	FALSE	canonical	3	10	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAATGACTACAAAATTTT	NA	False	NA	NA	False	AATAAA	-17	NA	28704372	28700079	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_28701582_28703942
H1_mix_00024113	chr13	-	3408	25	NIC	ENSG00000102710.21	novel	2836	25	NA	NA	25	14	combination_of_known_junctions	FALSE	canonical	3	82	junction_6	110.0029986965	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTTTTTTTAATGTG	112	False	NA	-14	True	TTTAAA	-39	NA	37059604	37009602	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_37009810_37012191_37012298_37017244_37017365_37019341_37019398_37021447_37021603_37022010_37023045_37024034_37024194_37024339_37024443_37025319_37025438_37026203_37026237_37026789_37026817_37028147_37028306_37029764_37029837_37031566_37031624_37031738_37031896_37033448_37033589_37040404_37040459_37040575_37040693_37044077_37044182_37045246_37045374_37047534_37047602_37047877_37047937_37048563_37048600_37051487_37051584_37059558
H1_mix_00024114	chr13	-	2175	18	NIC	ENSG00000102710.21	novel	2836	25	NA	NA	4	-26	combination_of_known_junctions	FALSE	canonical	3	149	junction_16	109.774036549386	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAATATTTCAAAAAC	29	True	NA	-26	True	AATAAA	-4	NA	37059625	37023574	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_37024194_37024339_37024443_37025319_37025438_37026203_37026237_37026789_37026817_37028147_37028306_37029764_37029837_37031566_37031624_37031738_37031896_37033448_37033589_37040404_37040459_37040575_37040693_37044077_37044182_37045246_37045374_37047534_37047602_37047877_37047937_37051487_37051584_37059558
H1_mix_00024134	chr13	-	619	5	NIC	ENSG00000123200.17	novel	695	5	NA	NA	-24	-97	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	112.530829109182	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATCTTAGAGAAAGAATGAA	5676	False	NA	NA	False	NA	NA	NA	46052709	46042253	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_46042276_46044954_46045065_46045390_46045514_46051931_46051990_46052403
H1_mix_00024145	chr13	-	18538	1	Genic_Genomic	ENSG00000226792.8	novel	NA	NA	NA	NA	12179	-85412	mono-exon	FALSE	NA	NA	NA	NA	NA	653	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATGCCTTTGAGGCATT	NA	False	NA	NA	False	GGGGCT	-15	NA	51188073	51169535	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr13_-_51169500_51188100
H1_mix_00024146	chr13	-	3767	20	FSM	ENSG00000102786.15	ENST00000469430.5	3767	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	76.1776608401724	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAGTAATCATTTAAAA	7	True	NA	22	True	AATAAA	-41	NA	51452791	51365198	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr13_-_51365846_51367804_51367899_51368938_51369311_51374207_51374440_51374653_51374797_51376047_51376175_51378238_51378455_51379461_51379573_51382028_51382124_51383328_51383462_51383588_51383742_51387385_51387541_51389318_51389445_51395299_51395484_51421111_51421335_51423029_51423091_51430293_51430384_51451024_51451175_51451977_51452056_51452414
H1_mix_00024157	chr13	-	6878	18	NNC	ENSG00000139734.19	novel	4745	28	NA	NA	3	-99636	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	42.972993853024	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGCTGATTTTTTTTTT	-6	True	NA	-9	True	AATAAA	-16	NA	60163925	59960889	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_59965535_59969943_59970059_59970851_59971161_59974351_59974457_59980794_59980860_59983768_59983888_59991157_59991275_59992067_59992187_59992472_59992584_60008543_60008650_60010532_60010670_60015912_60015983_60016070_60016146_60042689_60042821_60093627_60093733_60112009_60112187_60132956_60132990_60163586
H1_mix_00024167	chr13	-	7716	23	NNC	ENSG00000139746.16	novel	5258	22	NA	NA	22	-6	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_2	49.2723289148607	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTTGTTAACGTTTTAAA	25	True	NA	-17	True	AATAAA	-14	NA	79406199	79311829	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_79314994_79318820_79318880_79319534_79320711_79322348_79322463_79334343_79334431_79337101_79337303_79341122_79341228_79342663_79342832_79344247_79344323_79344668_79344795_79354438_79354571_79355219_79355385_79358273_79358434_79359574_79359687_79365577_79365719_79366054_79366226_79366632_79366873_79368729_79368991_79370944_79371163_79371841_79371931_79377378_79377516_79378788_79378908_79405703
H1_mix_00024168	chr13	-	4051	21	NNC	ENSG00000139746.16	novel	3624	21	NA	NA	25	-11	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_14	38.4687860479116	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGCCAA	28	True	NA	NA	False	AAAAAG	-31	NA	79406196	79319964	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_79320711_79322348_79322463_79334343_79334431_79337101_79337303_79341122_79341228_79342663_79342832_79344247_79344323_79344668_79344795_79354438_79354562_79355219_79355385_79358273_79358434_79359574_79359687_79365577_79365719_79366054_79366226_79366632_79366873_79368729_79368991_79370944_79371163_79371841_79371931_79377378_79377516_79378788_79378908_79405703
H1_mix_00024177	chr13	-	1426	9	NIC	ENSG00000102595.21	novel	1547	10	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	65.6856862261482	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAATTGTAATTTCTCA	22	True	NA	-11	True	AATAAA	-22	NA	96053374	95984903	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_95985338_95986332_95986433_95996062_95996136_95999210_95999308_96013306_96013482_96023039_96023153_96023628_96023760_96031888_96031972_96053154
H1_mix_00024178	chr13	-	1049	8	NNC	ENSG00000102595.21	novel	4850	39	NA	NA	12	2119	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	66.4803177870054	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTGTTTAGTATTACAG	15	True	NA	NA	False	ATTAAA	-25	NA	96053381	95993791	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_95993942_95996062_95996136_95999210_95999308_96013306_96013482_96023039_96023153_96023628_96023760_96031888_96031972_96053154
H1_mix_00024188	chr13	-	1159	10	NIC	ENSG00000134905.17	novel	795	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	91.2567940984988	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCACCGCCTAAATAGCAA	2	True	NA	NA	False	AATAAA	-22	NA	110706052	110662837	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_110663051_110663450_110663519_110667339_110667474_110676973_110677104_110683050_110683135_110687720_110687827_110687946_110688019_110701437_110701556_110705520_110705572_110705869
H1_mix_00024189	chr13	-	2055	5	NNC	ENSG00000088448.14	novel	1193	5	NA	NA	0	50773	intron_retention	FALSE	non_canonical	0	0	junction_1	294.344504789881	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCTGAGACTGTGTAATT	384	False	NA	NA	False	NA	NA	NA	110914803	110827766	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_110827802_110892697_110894394_110906032_110906125_110910617_110910771_110914724
H1_mix_00024192	chr13	-	2385	6	NNC	ENSG00000088448.14	novel	1193	5	NA	NA	0	50773	intron_retention	FALSE	non_canonical	0	0	junction_1	281.462324299363	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCTGAGACTGTGTAATT	118	False	110915091	NA	False	NA	NA	NA	110915069	110827766	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_110827802_110892697_110894394_110903475_110903540_110906032_110906125_110910617_110910771_110914724
H1_mix_00024193	chr13	-	11102	4	NIC	ENSG00000088448.14	novel	2495	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	75	junction_1	246.349796472865	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGACCGCTTTGCGGGTG	118	False	110915091	NA	False	AGTAAA	-18	NA	110915069	110893027	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr13_-_110903540_110906032_110906125_110910617_110910771_110914724
H1_mix_00024203	chr13	-	3403	7	NNC	ENSG00000150401.15	novel	3032	7	NA	NA	36	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_6	37.5484871717742	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTTTCCTTTCGATTCT	39	False	NA	-1	True	ATTAAA	-16	NA	113490915	113455818	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr13_-_113458109_113459311_113459409_113461053_113461137_113474123_113474255_113480574_113480744_113483839_113484224_113490666
H1_mix_00024215	chr14	+	1023	1	FSM	ENSG00000277156.1	ENST00000616611.1	1050	1	121	-94	121	94	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCCCTCAGGGGTTGGGG	NA	False	NA	NA	False	NA	NA	NA	19267235	19268258	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_19267200_19268300
H1_mix_00024216	chr14	+	1847	16	FSM	ENSG00000129484.14	ENST00000429687.8	1827	16	-21	1	-1	0	multi-exon	FALSE	canonical	3	242	junction_8	31.1508159336691	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACTGGCTTCTTCGGGCT	-11	True	NA	13	True	AATAAA	-15	NA	20343613	20357903	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_20343688_20344931_20345088_20345393_20345465_20346862_20346914_20350525_20350623_20351046_20351123_20352244_20352348_20354084_20354248_20354808_20354948_20355751_20355816_20355896_20356032_20356306_20356435_20356589_20356690_20357050_20357150_20357395_20357521_20357637
H1_mix_00024217	chr14	+	856	5	FSM	ENSG00000129484.14	ENST00000530598.2	842	5	-14	0	0	0	multi-exon	FALSE	canonical	3	325	junction_1	15.3195136998535	1663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTCACCCTGTAAGTACT	1673	False	NA	NA	False	GGGGCT	-29	NA	20355781	20357509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_20355816_20355896_20356032_20356306_20356435_20356589_20356690_20357050
H1_mix_00024218	chr14	+	635	6	FSM	ENSG00000129484.14	ENST00000539930.1	635	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	122.468934836554	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCCTTCAGCTGTGGTG	1673	False	NA	-57	True	TTTAAA	-11	NA	20355781	20357776	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_20355816_20355896_20356032_20356306_20356435_20356589_20356690_20357050_20357150_20357637
H1_mix_00024221	chr14	+	1451	5	FSM	ENSG00000100823.12	ENST00000555414.5	1437	5	-14	0	-14	0	multi-exon	FALSE	canonical	3	332	junction_1	808.280698458153	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCTTCGTGTCTTACCC	NA	False	NA	23	True	AATAAA	-20	NA	20455176	20457772	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_20455339_20455577_20455704_20455913_20456102_20456667_20456861_20456990
H1_mix_00024226	chr14	+	1706	4	FSM	ENSG00000100823.12	ENST00000553555.5	1603	4	-99	-4	-64	0	multi-exon	FALSE	canonical	3	2038	junction_2	117.995291808143	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCACATGAAAATAAAGAGCC	NA	False	NA	-11	True	TTTAAA	-43	NA	20455126	20457738	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_20455704_20455913_20456102_20456667_20456861_20456990
H1_mix_00024227	chr14	+	1828	3	FSM	ENSG00000100823.12	ENST00000557159.5	1803	3	-25	0	0	0	multi-exon	FALSE	canonical	3	2038	junction_1	74	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCACATGAAAATAAAGAGCC	-20	True	NA	-11	True	TTTAAA	-43	NA	20455214	20457738	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_20456102_20456667_20456861_20456990
H1_mix_00024228	chr14	+	1464	5	FSM	ENSG00000100823.12	ENST00000216714.8	1453	5	-11	0	0	0	multi-exon	FALSE	canonical	3	1474	junction_1	323.839755897882	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGCTGTCTTCGTGTCT	-20	True	NA	18	True	AATAAA	-15	NA	20455214	20457767	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_20455395_20455577_20455704_20455913_20456102_20456667_20456861_20456990
H1_mix_00024230	chr14	+	1494	6	FSM	ENSG00000198805.12	ENST00000361505.10	1477	6	-17	0	-17	0	multi-exon	FALSE	canonical	3	259	junction_4	30.2416930742973	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTTTTTGTGTAACT	NA	False	NA	57	True	AATAAA	-17	NA	20469388	20477089	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_20469536_20472307_20472478_20474471_20474576_20474772_20474949_20475061_20475253_20476383
H1_mix_00024231	chr14	+	1701	5	FSM	ENSG00000198805.12	ENST00000554056.5	1635	5	-37	-29	-29	0	multi-exon	FALSE	canonical	3	259	junction_3	28.7608675112556	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCATTTTTTTGTGTAA	NA	False	NA	55	True	AATAAA	-15	NA	20469376	20477087	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_20469536_20472307_20472478_20474471_20474949_20475061_20475253_20476383
H1_mix_00024232	chr14	+	1163	2	FSM	ENSG00000214274.10	ENST00000336811.10	1222	2	56	3	56	0	multi-exon	FALSE	canonical	3	23	junction_1	0	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCAGAGTCTTCTCACTG	13	True	NA	23	True	AATAAA	-24	NA	20684232	20694183	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_20684759_20693546
H1_mix_00024233	chr14	+	1942	2	FSM	ENSG00000258818.4	ENST00000555835.3	2061	2	0	119	0	-119	multi-exon	FALSE	canonical	3	13	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCCACTACCAACCCAAAT	-26	True	NA	NA	False	NA	NA	NA	20684559	20701097	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_20684759_20699354
H1_mix_00024236	chr14	+	1084	5	FSM	ENSG00000165792.18	ENST00000554588.5	1077	5	-7	0	0	0	multi-exon	FALSE	canonical	3	139	junction_3	220.46825168264	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCGGGCTCGAAATCCAG	-16	True	NA	NA	False	NA	NA	NA	20989972	20993116	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_20990078_20990229_20990384_20990463_20990599_20992091_20992206_20992540
H1_mix_00024237	chr14	+	2908	10	FSM	ENSG00000165792.18	ENST00000555640.6	2887	10	-21	0	0	0	multi-exon	FALSE	canonical	3	139	junction_3	154.438369185068	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATTTTTAATAATAAATAA	-16	True	NA	-23	True	NA	NA	NA	20989972	20996995	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_20990078_20990229_20990384_20990463_20990599_20992091_20992206_20992540_20992623_20993117_20994064_20994542_20994614_20994793_20995234_20995900_20996293_20996526
H1_mix_00024238	chr14	+	1593	13	FSM	ENSG00000165792.18	ENST00000382985.8	1586	13	-7	0	0	0	multi-exon	FALSE	canonical	3	472	junction_3	62.3698645180507	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAATAAATTTTTGAAGA	-16	True	NA	-9	True	NA	NA	NA	20989972	20997009	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_20990078_20990229_20990384_20990463_20990599_20992123_20992206_20992540_20992623_20993117_20993192_20993968_20994064_20994542_20994614_20994793_20994902_20995164_20995234_20995900_20995952_20996208_20996293_20996526
H1_mix_00024239	chr14	+	1626	13	FSM	ENSG00000165792.18	ENST00000555533.6	1605	13	-21	0	0	0	multi-exon	FALSE	canonical	3	139	junction_3	135.274489464939	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATAAATTTTTGAAGAA	-16	True	NA	-8	True	NA	NA	NA	20989972	20997010	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_20990078_20990229_20990384_20990463_20990599_20992091_20992206_20992540_20992623_20993117_20993192_20993968_20994064_20994542_20994614_20994793_20994902_20995164_20995234_20995900_20995952_20996208_20996293_20996526
H1_mix_00024240	chr14	+	1514	14	FSM	ENSG00000165792.18	ENST00000556670.6	1500	14	-14	0	0	0	multi-exon	FALSE	canonical	3	31	junction_13	157.842105211236	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAGTGGATTTTGTGATT	-16	True	NA	12	True	AATAAA	-19	NA	20989972	20997030	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_20990078_20990229_20990384_20990463_20990599_20992123_20992206_20992540_20992623_20993117_20993192_20993968_20994064_20994542_20994614_20994793_20994902_20995164_20995234_20995900_20995952_20996208_20996293_20996526_20996712_20996811
H1_mix_00024241	chr14	+	1546	14	FSM	ENSG00000165792.18	ENST00000339374.11	1539	14	-7	0	0	0	multi-exon	FALSE	canonical	3	370	junction_13	81.8069599620035	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGATTTTGTGATTCTTAA	-16	True	NA	17	True	AATAAA	-24	NA	20989972	20997035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_20990078_20990229_20990384_20990463_20990599_20992123_20992206_20992540_20992623_20993117_20993192_20993968_20994064_20994542_20994614_20994793_20994902_20995164_20995234_20995900_20995952_20996208_20996293_20996526_20996712_20996784
H1_mix_00024243	chr14	+	1533	14	FSM	ENSG00000165792.18	ENST00000557550.6	1529	14	-4	0	0	0	multi-exon	FALSE	canonical	3	139	junction_3	138.651408279006	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTTTGAAGAATGGAAG	10	True	NA	-2	True	AATAAA	-5	NA	20989998	20997016	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_20990078_20990229_20990384_20990463_20990599_20992091_20992206_20992540_20992623_20993117_20993192_20993968_20994064_20994542_20994614_20994793_20994902_20995164_20995234_20995900_20995952_20996208_20996293_20996526_20996712_20996784
H1_mix_00024246	chr14	+	5277	23	NNC	ENSG00000165801.10	novel	5893	24	NA	NA	-188	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_20	62.0955841445101	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCCTCTAAGGAGCTAG	12	False	NA	21	True	ATTAAA	-15	NA	21070084	21089545	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_21070400_21073044_21073243_21073931_21075181_21075331_21075500_21075644_21075766_21076359_21076457_21076562_21076644_21076773_21076891_21078176_21078273_21078372_21078489_21078883_21079011_21080659_21080783_21080872_21081017_21081508_21082120_21082243_21082479_21082830_21082918_21083834_21084051_21084752_21084924_21085688_21085867_21087000_21087106_21087955_21088099_21088829_21088877_21089013
H1_mix_00024247	chr14	+	5266	23	NIC	ENSG00000165801.10	novel	5893	24	NA	NA	-189	0	combination_of_known_junctions	FALSE	canonical	3	161	junction_20	39.7328891390853	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCCTCTAAGGAGCTAG	11	True	NA	21	True	ATTAAA	-15	NA	21070083	21089545	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_21070400_21073044_21073243_21073931_21075181_21075331_21075500_21075644_21075766_21076359_21076457_21076562_21076644_21076773_21076891_21078176_21078273_21078372_21078489_21078883_21079011_21080659_21080783_21080872_21081017_21081508_21082120_21082243_21082479_21082830_21082918_21083834_21084051_21084752_21084924_21085688_21085867_21087000_21087106_21087967_21088099_21088829_21088877_21089013
H1_mix_00024248	chr14	+	5893	24	FSM	ENSG00000165801.10	ENST00000298694.9	5893	24	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_20	59.6347420340435	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGCAGAGTGGCTCCTC	11	True	NA	14	True	AATAAA	-25	NA	21070303	21090248	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_21070400_21073044_21073243_21073931_21075181_21075331_21075500_21075644_21075766_21076359_21076457_21076562_21076644_21076773_21076891_21078176_21078273_21078372_21078489_21078883_21079011_21080659_21080783_21080872_21081017_21081508_21082120_21082243_21082479_21082830_21082918_21083834_21084051_21084752_21084924_21085688_21085867_21087000_21087106_21087319_21087464_21087967_21088099_21088829_21088877_21089013
H1_mix_00024250	chr14	+	2928	10	FSM	ENSG00000165801.10	ENST00000554514.1	2928	10	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_8	63.7043712281995	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCCTCTAAGGAGCTAG	9825	False	NA	21	True	ATTAAA	-15	NA	21080896	21089545	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_21081017_21081508_21082120_21082243_21082479_21082830_21082918_21083834_21084051_21084752_21084924_21085688_21085867_21087000_21087464_21087967_21088099_21088829
H1_mix_00024252	chr14	+	431	3	ISM	ENSG00000092200.13	ENST00000553927.1	2875	11	21188	-19	16513	16	3prime_fragment	FALSE	canonical	1	1	junction_2	1	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTAGTGTCTCTCAATCTA	1203	False	NA	NA	False	TATAAA	-38	NA	21345111	21351317	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_+_21345198_21348171_21348303_21351103
H1_mix_00024253	chr14	+	4527	9	FSM	ENSG00000092203.15	ENST00000448790.7	4514	9	-13	0	0	0	multi-exon	FALSE	canonical	3	372	junction_5	42.703739590345	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGATTGCAATTCTAGC	-37	True	NA	20	True	AATAAA	-22	NA	21477181	21499170	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_21477285_21477495_21477565_21487450_21487694_21488589_21488851_21489172_21489404_21492295_21492377_21492507_21493258_21495228_21495393_21496545
H1_mix_00024254	chr14	+	2534	7	FSM	ENSG00000100439.11	ENST00000428304.7	3051	7	-87	604	-77	1	multi-exon	FALSE	canonical	3	183	junction_1	30.4671954731642	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGTGGGGATGATGTTTAA	8708	False	NA	18	True	AATAAA	-18	NA	22598212	22612359	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_22598330_22601666_22601756_22603389_22603763_22603924_22604080_22606421_22606534_22609723_22609911_22610858
H1_mix_00024257	chr14	+	2916	10	FSM	ENSG00000155463.14	ENST00000285848.9	1719	10	-1225	28	-1225	0	multi-exon	FALSE	canonical	3	705	junction_5	38.0529196167393	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTAGTAAACCTCTGTACT	NA	False	NA	2	True	NA	NA	NA	22765296	22771761	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_22766765_22767247_22767410_22767957_22768172_22769790_22769935_22770192_22770279_22770460_22770626_22770804_22770910_22771017_22771181_22771267_22771349_22771433
H1_mix_00024258	chr14	+	1596	8	FSM	ENSG00000155463.14	ENST00000481218.1	1596	8	0	0	0	0	multi-exon	FALSE	canonical	3	771	junction_2	27.1946873563232	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTAGTAAACCTCTGTACT	369	False	NA	2	True	NA	NA	NA	22767281	22771761	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_22767410_22767957_22768172_22769790_22769935_22770192_22770626_22770804_22770910_22771017_22771181_22771267_22771349_22771433
H1_mix_00024259	chr14	+	2023	3	FSM	ENSG00000172590.18	ENST00000557543.5	2020	3	-3	0	-3	0	multi-exon	FALSE	canonical	3	31	junction_1	922.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAACAGAAGAG	NA	False	NA	NA	False	NA	NA	NA	22829875	22832078	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_22829949_22830052_22830111_22830186
H1_mix_00024260	chr14	+	1130	5	FSM	ENSG00000172590.18	ENST00000355151.9	1118	5	-12	0	-8	0	multi-exon	TRUE	canonical	3	790	junction_1	399.647579124408	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTAGCCAAGGTCCCTT	NA	False	NA	12	True	AATAAA	-18	NA	22829870	22835037	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_22829941_22830049_22830111_22830186_22830255_22833417_22833483_22834171
H1_mix_00024261	chr14	+	919	4	FSM	ENSG00000172590.18	ENST00000555345.5	895	4	-24	0	-8	0	multi-exon	FALSE	canonical	3	1547	junction_2	151.680219174713	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGCTTGTAATCCCAGCTA	NA	False	NA	NA	False	ACTAAA	-31	NA	22829870	22834717	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_22830111_22830186_22830255_22833417_22833483_22834171
H1_mix_00024262	chr14	+	1127	5	FSM	ENSG00000172590.18	ENST00000397496.7	1111	5	-16	0	-8	0	multi-exon	FALSE	canonical	3	503	junction_1	518.628479742484	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTAGCCAAGGTCCCTT	NA	False	NA	12	True	AATAAA	-18	NA	22829870	22835037	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_22829941_22830052_22830111_22830186_22830255_22833417_22833483_22834171
H1_mix_00024264	chr14	+	589	5	FSM	ENSG00000172590.18	ENST00000553711.5	586	5	-3	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	836.896200254249	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCTGTCTCTGGATTTCT	10	True	NA	22	True	AATAAA	-24	NA	22829902	22834345	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_22830111_22830186_22830255_22830963_22831038_22833417_22833483_22834171
H1_mix_00024265	chr14	+	411	5	FSM	ENSG00000172590.18	ENST00000432849.7	411	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	749.391419753389	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGTCTCTGGATTTCTT	10	True	NA	23	True	AATAAA	-25	NA	22829902	22834346	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_22829941_22830052_22830111_22830186_22830255_22833417_22833490_22834171
H1_mix_00024266	chr14	+	416	5	FSM	ENSG00000172590.18	ENST00000556840.5	398	5	-18	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	679.937680967896	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCTCTGGATTTCTTT	10	True	NA	24	True	AATAAA	-26	NA	22829902	22834347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_22829949_22830049_22830111_22830186_22830255_22833417_22833483_22834171
H1_mix_00024267	chr14	+	343	4	FSM	ENSG00000172590.18	ENST00000397505.2	333	4	-10	0	0	0	multi-exon	FALSE	canonical	3	99	junction_3	731.407015431369	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCTCTGGATTTCTTT	10	True	NA	24	True	AATAAA	-26	NA	22829902	22834347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_22829941_22830049_22830111_22830186_22830255_22834171
H1_mix_00024268	chr14	+	933	3	FSM	ENSG00000172590.18	ENST00000557221.1	922	3	-11	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	888.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGCGAGACTCCGTCTCA	10	True	NA	NA	False	NA	NA	NA	22829902	22834828	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_22830111_22830186_22830255_22834171
H1_mix_00024270	chr14	+	519	2	FSM	ENSG00000157227.14	ENST00000547074.1	560	2	-4	45	-4	-45	multi-exon	FALSE	canonical	3	52	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGCTAGACCCTGGCA	-6	True	NA	NA	False	NA	NA	NA	22836555	22841639	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_22836926_22841490
H1_mix_00024271	chr14	+	3701	10	FSM	ENSG00000157227.14	ENST00000311852.11	3701	10	0	0	0	0	multi-exon	TRUE	canonical	2	47	junction_5	7.09372875533883	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGTGTGGCTGAGCTC	-16	True	NA	13	True	AATAAA	-13	NA	22836584	22847758	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_22836926_22841490_22841640_22841912_22842036_22842409_22842718_22843256_22843419_22843709_22843871_22844370_22844510_22844629_22844781_22845250_22845367_22845707
H1_mix_00024273	chr14	+	6964	7	FSM	ENSG00000197324.9	ENST00000359591.9	6892	7	13	-85	13	85	multi-exon	TRUE	canonical	3	276	junction_4	24.5402164257413	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTCAAACCCTGCACTGT	-11	True	NA	NA	False	AGTAAA	-39	NA	22871752	22881798	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_22872338_22872737_22872783_22873310_22873447_22875054_22875246_22875354_22876373_22876688_22876819_22876939
H1_mix_00024274	chr14	+	2031	5	FSM	ENSG00000139890.10	ENST00000267396.9	1858	5	-32	-141	-32	141	multi-exon	FALSE	canonical	2	7	junction_4	4.27200187265877	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGTAGTCCATGTCATAG	5785	False	NA	NA	False	NA	NA	NA	22883189	22887819	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_22883391_22884673_22885016_22885265_22885340_22886023_22886232_22886613
H1_mix_00024275	chr14	+	2892	2	FSM	ENSG00000179933.6	ENST00000319074.6	2914	2	0	22	0	-22	multi-exon	FALSE	canonical	3	1153	junction_1	0	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAATAAATTTAATTTCAAA	-26	True	NA	-15	True	AATATA	-16	NA	23095504	23100434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23095620_23097657
H1_mix_00024276	chr14	+	3550	4	FSM	ENSG00000129473.11	ENST00000250405.10	3526	4	-24	0	-19	0	multi-exon	FALSE	canonical	3	14	junction_1	5.79271573232759	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTGAACAGGGTTTGTGA	21	False	NA	17	True	AATAAA	-25	NA	23306808	23311751	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23306895_23307191_23307280_23307759_23308200_23308815
H1_mix_00024277	chr14	+	3489	4	FSM	ENSG00000129473.11	ENST00000679000.1	3539	4	50	0	49	0	multi-exon	FALSE	canonical	2	2	junction_1	11.2644968324772	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGTTTAATGAGAAGGAC	45	False	NA	1	True	AATAAA	-9	NA	23306900	23311735	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23306942_23307191_23307280_23307759_23308200_23308815
H1_mix_00024278	chr14	+	3183	6	FSM	ENSG00000100836.11	ENST00000397276.6	2768	6	-389	-26	-389	26	multi-exon	FALSE	canonical	3	2801	junction_1	191.38547489295	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATCTTCCTATTCTCT	748	False	NA	43	True	AATAAA	-29	NA	23321067	23326189	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23321821_23322180_23322296_23322998_23323067_23323376_23323484_23323964_23324053_23324137
H1_mix_00024279	chr14	+	1811	7	FSM	ENSG00000100836.11	ENST00000216727.9	1811	7	0	0	0	0	multi-exon	FALSE	canonical	3	2743	junction_6	227.263430112868	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTGGCCTTTTGGGTGT	-2	True	NA	17	True	AATAAA	-21	NA	23321456	23326163	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23321821_23322180_23322296_23322998_23323067_23323376_23323484_23323964_23324053_23324137_23324290_23325246
H1_mix_00024280	chr14	+	1220	6	FSM	ENSG00000100836.11	ENST00000556821.5	1220	6	0	0	0	0	multi-exon	FALSE	canonical	3	2743	junction_5	211.823133769662	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGGAGGAGAGAGAGGAAA	56	False	NA	12	True	AAAAAG	-7	NA	23321542	23325298	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23322296_23322998_23323067_23323376_23323484_23323964_23324053_23324137_23324290_23325246
H1_mix_00024282	chr14	+	1827	10	FSM	ENSG00000129460.16	ENST00000397154.7	2204	10	-11	388	3	257	multi-exon	FALSE	canonical	3	488	junction_1	150.612904206712	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTAACACATGAATTTTA	-7	True	NA	NA	False	AATACA	-13	NA	23469691	23478435	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23469728_23470041_23470102_23470905_23470978_23475170_23475309_23475557_23475643_23475725_23475779_23476028_23476153_23476238_23476408_23477199_23477357_23477502
H1_mix_00024283	chr14	+	722	6	FSM	ENSG00000129460.16	ENST00000553336.5	712	6	-10	0	0	0	multi-exon	FALSE	canonical	3	488	junction_1	167.631023381712	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGCAGAAGATGACCAGT	-10	True	NA	NA	False	NA	NA	NA	23469688	23476054	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23469728_23470041_23470102_23470905_23470978_23475170_23475643_23475725_23475779_23476028
H1_mix_00024284	chr14	+	1122	11	FSM	ENSG00000129460.16	ENST00000408901.8	1108	11	-14	0	0	0	multi-exon	FALSE	canonical	3	488	junction_1	142.884043895741	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGCCCCTTTTTGCACA	-10	True	NA	13	True	AATAAA	-19	NA	23469688	23478173	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23469728_23470041_23470102_23470905_23470978_23475170_23475309_23475557_23475643_23475725_23475779_23476028_23476153_23476238_23476408_23477199_23477357_23477502_23477561_23478006
H1_mix_00024285	chr14	+	629	4	FSM	ENSG00000129460.16	ENST00000556580.4	629	4	0	0	0	0	multi-exon	FALSE	canonical	3	866	junction_3	80.8386596183341	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCTTTTTGCACATGTAT	6467	False	NA	18	True	AATAAA	-24	NA	23476165	23478178	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23476408_23477199_23477357_23477502_23477561_23478006
H1_mix_00024286	chr14	+	454	3	FSM	ENSG00000129460.16	ENST00000556103.1	454	3	0	0	0	0	multi-exon	FALSE	canonical	3	866	junction_2	91.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATTTGTATATTTTTTG	6646	False	NA	14	True	NA	NA	NA	23476344	23478036	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23476408_23477199_23477561_23478006
H1_mix_00024287	chr14	+	2425	2	FSM	ENSG00000259431.6	ENST00000555446.1	571	2	19	-1873	0	511	multi-exon	FALSE	canonical	3	53	junction_1	0	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3	True	NA	NA	False	NA	NA	NA	23556006	23560782	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23556344_23558694
H1_mix_00024288	chr14	+	1800	3	FSM	ENSG00000259431.6	ENST00000404535.3	1779	3	-21	0	-2	0	multi-exon	FALSE	canonical	3	27	junction_1	21.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTTCTCAGGCTTTATT	-18	True	NA	17	True	AATATA	-17	NA	23555985	23559574	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23556344_23556742_23557305_23558694
H1_mix_00024290	chr14	+	2611	2	FSM	ENSG00000259431.6	ENST00000288014.7	2611	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAGATGAAATGGGTGACA	-37	True	NA	NA	False	NA	NA	NA	23556270	23560271	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23557305_23558694
H1_mix_00024291	chr14	+	1691	9	FSM	ENSG00000100867.15	ENST00000250383.11	1676	9	-15	0	-15	0	multi-exon	FALSE	canonical	1	2	junction_1	1.6583123951777	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGGAAGCATCTGTCAAG	6192	False	NA	12	True	AATAAA	-18	NA	23636348	23645639	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23636773_23638826_23639005_23639178_23639357_23639793_23639896_23643151_23643220_23644110_23644163_23644408_23644544_23644826_23644883_23645141
H1_mix_00024292	chr14	+	1288	8	FSM	ENSG00000157326.19	ENST00000313250.10	1264	8	-24	0	12	0	multi-exon	FALSE	canonical	3	184	junction_3	64.378028955886	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACCTGTTCATTTCTCAG	-8	True	NA	NA	False	AATAAA	-31	NA	23953745	23969279	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23953917_23955034_23955213_23959901_23960004_23965761_23965833_23965931_23965984_23966282_23966418_23967210_23967267_23968756
H1_mix_00024293	chr14	+	925	5	FSM	ENSG00000157326.19	ENST00000397075.7	727	5	67	-265	57	0	multi-exon	FALSE	canonical	3	119	junction_3	89.0126395519198	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATTGACCTGTTCATTT	92	False	NA	NA	False	AATAAA	-26	NA	23953845	23969274	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23953917_23955034_23955213_23959901_23960004_23967210_23967267_23968756
H1_mix_00024294	chr14	+	925	5	Fusion	ENSG00000187630.18_ENSG00000157326.19	novel	727	5	NA	NA	57	0	multi-exon	FALSE	canonical	3	115	junction_3	93.5053474406678	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATTGACCTGTTCATTT	92	False	NA	NA	False	AATAAA	-26	NA	23953845	24006403	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr14_+_23953917_23955034_23955213_23959901_23960004_24004336_24004393_24005885
H1_mix_00024295	chr14	+	1124	5	FSM	ENSG00000187630.18	ENST00000397071.5	1117	5	-7	0	-7	0	multi-exon	FALSE	canonical	3	22	junction_2	142.347286591631	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACCTGTTCATTTCTCAG	NA	False	NA	NA	False	AATAAA	-31	NA	23988810	24006408	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23989076_23990181_23990360_23995031_23995134_24004336_24004393_24005885
H1_mix_00024296	chr14	+	1276	8	FSM	ENSG00000187630.18	ENST00000335125.11	1258	8	-18	0	-18	0	multi-exon	FALSE	canonical	3	22	junction_2	110.578995680528	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATTGACCTGTTCATTT	16	False	NA	NA	False	AATAAA	-26	NA	23988910	24006403	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23989076_23990181_23990360_23995031_23995134_24000862_24000934_24001032_24001085_24001383_24001518_24004336_24004393_24005885
H1_mix_00024297	chr14	+	409	3	ISM	ENSG00000285467.1	ENST00000558293.7	1382	5	78801	251	78801	-251	3prime_fragment	FALSE	canonical	3	54	junction_2	2.5	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTCTTACTCGGGATTCC	NA	False	NA	NA	False	NA	NA	NA	24048731	24051126	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_+_24048812_24049284_24049341_24050853
H1_mix_00024298	chr14	+	1848	7	FSM	ENSG00000100889.12	ENST00000396973.8	1830	7	-18	0	-9	0	multi-exon	FALSE	canonical	3	355	junction_6	38	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGGCTGGATTTTTTTTT	-25	True	NA	5	True	AATAAA	-1	NA	24094140	24100562	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24094435_24096891_24097138_24098202_24098388_24098474_24098679_24099048_24099237_24099557_24099721_24099994
H1_mix_00024300	chr14	+	2179	10	FSM	ENSG00000100889.12	ENST00000216780.9	2179	10	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_6	34.1481883184467	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGATTTGTGCTGTTTT	-1	True	NA	13	True	NA	NA	NA	24094310	24104125	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24094435_24096891_24097138_24098202_24098388_24098474_24098679_24099048_24099237_24099557_24099721_24099994_24100214_24102752_24102891_24103159_24103256_24103509
H1_mix_00024301	chr14	+	957	5	FSM	ENSG00000100897.18	ENST00000557810.5	947	5	-10	0	-10	0	multi-exon	FALSE	canonical	3	90	junction_2	139.85952774123	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCGGGCCGCCCAGAAGCAC	-38	True	NA	NA	False	GGGGCT	-3	NA	24114766	24117349	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24115294_24115381_24115393_24115542_24115750_24116916_24117045_24117265
H1_mix_00024302	chr14	+	758	7	FSM	ENSG00000100897.18	ENST00000561375.5	748	7	-10	0	-10	0	multi-exon	FALSE	canonical	3	43	junction_2	162.088453218194	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAGCATCAAGGCCCGCG	-38	True	NA	NA	False	NA	NA	NA	24114766	24118436	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24114925_24115542_24115727_24116971_24117045_24117265_24117394_24117667_24117733_24118054_24118156_24118387
H1_mix_00024303	chr14	+	2604	15	FSM	ENSG00000100897.18	ENST00000559115.5	2711	15	107	0	-43	0	multi-exon	TRUE	canonical	3	144	junction_1	82.7484817050427	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCAGTGTCTGTCTCTCTC	NA	False	NA	16	True	AATAAA	-16	NA	24114733	24124029	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24114925_24115542_24115750_24116916_24117045_24117265_24117394_24117667_24117733_24118054_24118156_24118387_24118535_24118749_24118805_24119144_24119214_24119558_24119617_24119710_24119897_24120837_24120992_24121364_24121518_24122970_24123078_24123174
H1_mix_00024304	chr14	+	4314	15	FSM	ENSG00000100897.18	ENST00000446197.8	4304	15	-10	0	-10	0	multi-exon	FALSE	canonical	3	198	junction_1	71.3256758875535	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGGCTTCTGTGTTCTC	-38	True	NA	13	True	AATAAA	-24	NA	24114766	24125242	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24115294_24115381_24115750_24116916_24117045_24117265_24117394_24117667_24117733_24118054_24118156_24118387_24118535_24118749_24118805_24119144_24119214_24119558_24119617_24119710_24119897_24120837_24120992_24121364_24121518_24122970_24123078_24123174
H1_mix_00024311	chr14	+	920	1	FSM	ENSG00000139914.7	ENST00000559294.1	800	1	-122	2	-122	0	mono-exon	FALSE	NA	NA	NA	NA	NA	238	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGCTCCTCTCATCAT	262	False	NA	NA	False	AATAAA	-15	NA	24131927	24132847	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24131900_24132800
H1_mix_00024312	chr14	+	1012	11	FSM	ENSG00000092010.15	ENST00000206451.11	965	11	-50	3	-19	0	multi-exon	FALSE	canonical	2	536	junction_4	782.357232982478	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCATCAGCCCAAGTCTCT	3650	False	NA	29	True	AATAAA	-16	NA	24136143	24138959	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24136302_24136984_24137018_24137142_24137206_24137320_24137432_24137519_24137566_24137699_24137798_24138048_24138118_24138195_24138264_24138344_24138400_24138473_24138561_24138735
H1_mix_00024313	chr14	+	1090	10	FSM	ENSG00000092010.15	ENST00000561142.5	865	10	-53	-172	-19	0	multi-exon	FALSE	canonical	2	536	junction_4	822.264353274947	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCATCAGCCCAAGTCTCT	3650	False	NA	29	True	AATAAA	-16	NA	24136143	24138959	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24136302_24136984_24137018_24137142_24137206_24137320_24137432_24137519_24137566_24137699_24137798_24138048_24138264_24138344_24138400_24138473_24138561_24138735
H1_mix_00024314	chr14	+	945	11	FSM	ENSG00000092010.15	ENST00000561435.5	945	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	269.472243468599	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAAGTCTCTTTATTGGA	18	True	NA	37	True	AATAAA	-24	NA	24136226	24138967	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24136302_24136984_24137018_24137142_24137206_24137320_24137432_24137519_24137566_24137699_24137798_24138048_24138118_24138195_24138264_24138344_24138400_24138473_24138569_24138735
H1_mix_00024317	chr14	+	3502	21	FSM	ENSG00000092098.17	ENST00000324103.11	3502	21	0	0	0	0	multi-exon	TRUE	canonical	3	86	junction_8	24.2808566570457	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGGCTTCTTGGTGGTCC	-7	True	NA	15	True	AATAAA	-15	NA	24147497	24160655	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24147891_24147975_24148123_24148257_24148414_24148641_24148702_24148800_24148877_24149405_24149584_24150060_24150449_24150597_24150889_24151130_24151380_24151484_24151671_24151785_24151993_24155156_24155331_24155413_24155513_24155602_24155693_24157289_24157405_24157519_24157639_24157897_24158012_24158141_24158200_24159863_24159961_24160238_24160408_24160519
H1_mix_00024318	chr14	+	5574	29	FSM	ENSG00000259529.2	ENST00000558468.2	5574	29	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_27	43.5701844084662	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGGGGGCCTTTCCCTC	43	False	NA	NA	False	NA	NA	NA	24147547	24166452	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24147891_24147975_24148123_24148257_24148414_24148641_24148702_24148800_24148877_24149405_24149584_24150060_24150449_24150597_24150889_24151130_24151380_24151484_24151671_24151785_24151993_24155156_24155331_24155413_24155513_24155602_24155693_24157289_24157405_24157519_24157639_24157897_24158012_24158141_24158200_24159863_24159961_24160238_24160408_24160519_24161339_24162143_24162325_24162965_24163150_24163377_24163509_24163877_24163960_24164062_24164135_24164613_24164956_24165846_24165963_24166121
H1_mix_00024321	chr14	+	1626	9	FSM	ENSG00000213928.9	ENST00000396864.8	1626	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	16.9737849344217	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTATCTGATTTTCTGGG	-25	True	NA	11	True	AATAAA	-19	NA	24161264	24166565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24161339_24162143_24162325_24162965_24163150_24163377_24163509_24163877_24163960_24164062_24164135_24164613_24164956_24165846_24165963_24166121
H1_mix_00024322	chr14	+	1769	8	FSM	ENSG00000213928.9	ENST00000561415.1	1769	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	18.0690286379309	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCATTCTTCACACGATT	0	True	NA	NA	False	NA	NA	NA	24161289	24166254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24161339_24162143_24162325_24162965_24163150_24163377_24163509_24163877_24163960_24164062_24164956_24165846_24165963_24166121
H1_mix_00024323	chr14	+	1727	10	NIC	ENSG00000213928.9	novel	1626	9	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	35	junction_7	11.115554667022	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGTATCTGATTTTCTGG	0	True	NA	10	True	AATAAA	-18	NA	24161289	24166564	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_24161339_24162143_24162325_24162965_24163150_24163377_24163509_24163877_24163960_24164062_24164135_24164613_24164956_24165056_24165184_24165846_24165963_24166121
H1_mix_00024325	chr14	+	2312	20	FSM	ENSG00000100918.14	ENST00000620473.4	2405	20	93	0	-69	0	multi-exon	FALSE	canonical	3	150	junction_1	27.670999449357	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTCATGACTCATTTGT	5550	False	NA	131	True	AAAACA	-20	NA	24171945	24180257	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24172366_24172466_24172609_24172712_24172782_24172898_24173042_24173125_24173199_24173290_24173412_24175542_24175625_24176821_24176902_24177140_24177223_24177352_24177384_24177464_24177542_24177708_24177759_24178090_24178223_24178605_24178673_24178776_24178917_24179084_24179134_24179396_24179464_24179594_24179727_24179799_24179907_24180009
H1_mix_00024326	chr14	+	2276	19	FSM	ENSG00000100918.14	ENST00000611366.5	2276	19	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_12	24.8534594059749	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGATGTCATGACTCATT	13	True	NA	128	True	AAAACA	-17	NA	24172079	24180254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24172609_24172712_24172782_24172898_24173042_24173125_24173199_24173290_24173412_24175542_24175625_24176821_24176902_24177140_24177223_24177352_24177384_24177464_24177542_24177708_24177759_24178090_24178223_24178605_24178673_24178776_24178917_24179084_24179134_24179396_24179464_24179594_24179727_24179799_24179907_24180009
H1_mix_00024327	chr14	+	2720	17	FSM	ENSG00000100918.14	ENST00000619469.4	2720	17	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_10	24.653774432123	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGATGTCATGACTCATT	27	False	NA	128	True	AAAACA	-17	NA	24172134	24180254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24172609_24172712_24172782_24172898_24173042_24173125_24173199_24173290_24173412_24175542_24175625_24176821_24176902_24177140_24177223_24177352_24177384_24177464_24178223_24178605_24178673_24178776_24178917_24179084_24179134_24179396_24179464_24179594_24179727_24179799_24179907_24180009
H1_mix_00024328	chr14	+	661	3	FSM	ENSG00000100918.14	ENST00000560032.1	661	3	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_2	2.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTGCAGATCCGAATAGA	174	False	NA	NA	False	NA	NA	NA	24172281	24173163	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24172609_24172712_24172782_24172898
H1_mix_00024329	chr14	+	810	4	ISM	ENSG00000100918.14	ENST00000619469.4	2720	17	3408	2336	225	0	intron_retention	FALSE	canonical	3	186	junction_1	9.56846672960488	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATGGGTACCCTTATGCA	2828	False	NA	NA	False	GATAAA	-44	NA	24175542	24177918	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_+_24175625_24176821_24176902_24177140_24177223_24177352
H1_mix_00024330	chr14	+	1007	7	FSM	ENSG00000100918.14	ENST00000559797.1	1007	7	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	29.2498812913071	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGATGTCATGACTCATT	5411	False	NA	128	True	AAAACA	-17	NA	24178125	24180254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24178223_24178605_24178673_24178776_24178917_24179084_24179134_24179396_24179464_24179594_24179727_24179799
H1_mix_00024331	chr14	+	658	1	FSM	ENSG00000276698.1	ENST00000610486.1	658	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTCTTGAAGTATTCTG	100	False	NA	NA	False	AATAAA	-30	NA	24198432	24199090	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24198400_24199100
H1_mix_00024332	chr14	+	1984	10	FSM	ENSG00000100938.19	ENST00000355299.8	1972	10	-12	0	-12	0	multi-exon	FALSE	canonical	3	33	junction_1	89.2101140255097	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGCTGGGGCTTTCTGT	NA	False	NA	33	True	AATAAA	-23	NA	24232409	24239242	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24232848_24233218_24233341_24233478_24233599_24235736_24235821_24235966_24236141_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
H1_mix_00024334	chr14	+	1893	10	FSM	ENSG00000100938.19	ENST00000559836.5	1893	10	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	81.0159258844431	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGCTGGGGCTTTCTGT	-40	True	NA	33	True	AATAAA	-23	NA	24232441	24239242	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24232789_24233218_24233341_24233478_24233599_24235736_24235821_24235966_24236141_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
H1_mix_00024335	chr14	+	1562	10	FSM	ENSG00000100938.19	ENST00000559910.5	1562	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	111.368701412565	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATACCTCAATAAAGAGA	-3	True	NA	-5	True	AAAAAG	-22	NA	24232635	24239204	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24232789_24233218_24233341_24233478_24233599_24235736_24235821_24235966_24236042_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
H1_mix_00024336	chr14	+	1869	9	FSM	ENSG00000100938.19	ENST00000420554.6	1864	9	-8	3	0	0	multi-exon	FALSE	canonical	3	228	junction_7	39.4620070447513	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGATGCTGGGGCTTTC	21	False	NA	30	True	AATAAA	-20	NA	24232892	24239239	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24233341_24233478_24233599_24235736_24235821_24235966_24236141_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
H1_mix_00024337	chr14	+	1601	10	FSM	ENSG00000100938.19	ENST00000399440.7	1595	10	-6	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	68.4965530357388	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGCTGGGGCTTTCTGT	-10	True	NA	33	True	AATAAA	-23	NA	24232922	24239242	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24232978_24233218_24233341_24233478_24233599_24235736_24235821_24235966_24236141_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
H1_mix_00024338	chr14	+	1737	9	FSM	ENSG00000100938.19	ENST00000559104.5	1719	9	-18	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	99.710831909076	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGCTGGGGCTTTCTGT	-4	True	NA	33	True	AATAAA	-23	NA	24232928	24239242	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24233341_24233478_24233599_24235736_24235821_24235966_24236042_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
H1_mix_00024340	chr14	+	339	2	FSM	ENSG00000288044.2	ENST00000669726.2	355	2	4	12	4	-12	multi-exon	FALSE	canonical	3	139	junction_1	0	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTTGAGTAGTATTATA	-18	True	NA	78	True	AATAAA	-9	NA	24271204	24298846	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24271311_24298613
H1_mix_00024341	chr14	+	6042	10	FSM	ENSG00000196943.14	ENST00000267425.8	6045	10	3	0	3	0	multi-exon	FALSE	canonical	3	22	junction_4	8.01079518563375	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCTGCCAGTCTTTTGTC	-18	True	NA	15	True	AATAAA	-15	NA	24299852	24309124	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24300202_24300407_24300858_24301611_24301723_24301964_24302107_24302231_24302425_24303073_24303215_24303731_24303858_24304040_24304278_24304492_24304599_24304937
H1_mix_00024344	chr14	+	5530	10	FSM	ENSG00000100968.14	ENST00000539237.6	5686	10	156	0	18	0	multi-exon	FALSE	canonical	1	3	junction_1	30.8092498536269	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAACTCAATATTTTTTG	6	False	NA	6	True	AATAAA	-22	NA	24367519	24379604	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24367654_24368311_24368441_24369498_24370595_24372440_24372604_24373170_24373371_24373694_24373868_24374325_24374467_24375659_24375716_24375974_24376102_24376293
H1_mix_00024345	chr14	+	3031	10	FSM	ENSG00000100968.14	ENST00000554050.5	3057	10	26	0	-2	0	multi-exon	FALSE	canonical	2	2	junction_9	31.0976161207746	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGGCTCCAGAGCTCTT	532	False	NA	18	True	AATAAA	-18	NA	24368045	24378056	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24368441_24369498_24370595_24372440_24372604_24373170_24373371_24373694_24373868_24374325_24374467_24375659_24375716_24375974_24376102_24376293_24376555_24377637
H1_mix_00024346	chr14	+	4762	10	FSM	ENSG00000100968.14	ENST00000250373.9	4762	10	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_9	14.0957922099005	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTCAAACTCAATATTTT	5	True	NA	3	True	AATAAA	-19	NA	24368183	24379601	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24368441_24369498_24370595_24372440_24372604_24373170_24373371_24373694_24373868_24374325_24374467_24375659_24375716_24375974_24376102_24376293_24376879_24377637
H1_mix_00024349	chr14	+	7729	9	FSM	ENSG00000205978.6	ENST00000382554.4	7635	9	-94	0	-94	0	multi-exon	FALSE	canonical	3	55	junction_1	14.1989216139818	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATGTCCAGTTCTTTGT	-2	True	NA	28	True	AATAAA	-15	NA	24398908	24419283	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24399087_24399229_24399445_24407868_24408528_24408651_24410209_24411075_24411207_24411353_24411451_24412996_24413099_24413315_24413418_24414595
H1_mix_00024351	chr14	+	6795	8	FSM	ENSG00000100441.10	ENST00000553935.6	6778	8	-17	0	2	0	multi-exon	FALSE	canonical	3	46	junction_1	21.6691259724098	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATATCCCTCTCTCTGTCTT	-21	True	NA	NA	False	AATAAA	-24	NA	24429936	24441843	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24430120_24430713_24430932_24431462_24432611_24432721_24432853_24432935_24433033_24436071_24436180_24436387_24436490_24437035
H1_mix_00024352	chr14	+	3579	7	ISM	ENSG00000100441.10	ENST00000556842.5	2443	8	377	-791	88	0	3prime_fragment	FALSE	canonical	3	86	junction_1	9.1469484893415	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTGTATGGGGATG	250	False	NA	27	True	CATAAA	-22	NA	24430311	24438408	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_+_24430932_24431462_24432611_24432721_24432853_24432935_24433033_24436071_24436180_24436387_24436490_24437035
H1_mix_00024354	chr14	+	1903	2	NIC	ENSG00000258744.3	novel	1230	2	NA	NA	-32	670	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTTTTAATTGATTTTT	8	True	NA	9	True	AATAAA	-20	NA	24442977	24446051	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_24443113_24444283
H1_mix_00024355	chr14	+	2368	3	FSM	ENSG00000257185.2	ENST00000664061.1	2344	3	-24	0	-24	0	multi-exon	FALSE	canonical	2	4	junction_2	1.5	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATAATGCAATTGAGTTA	NA	False	NA	-39	True	NA	NA	NA	26810648	26820650	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_26812397_26816919_26817047_26820157
H1_mix_00024356	chr14	+	1543	1	FSM	ENSG00000197358.9	ENST00000550043.1	1585	1	64	-22	64	22	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGGAACACGAACATGCA	39	False	NA	NA	False	AATAAA	-41	NA	28264453	28265996	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_28264500_28266000
H1_mix_00024357	chr14	+	269	1	FSM	ENSG00000252686.1	ENST00000516877.1	103	1	-200	34	-200	-34	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACATACAAATTTGTTATG	NA	False	NA	NA	False	ACTAAA	-41	NA	29811715	29811984	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_29811700_29812000
H1_mix_00024358	chr14	+	2334	14	FSM	ENSG00000092140.16	ENST00000438909.6	2334	14	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	101.32973885455	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAATATTATAGCCACT	-7	True	NA	6	True	AATAAA	-18	NA	30559157	30616669	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_30559273_30586717_30586816_30589382_30589485_30592322_30592448_30593473_30593640_30597419_30597527_30598482_30598600_30601769_30601895_30601998_30602132_30605504_30605813_30607887_30608070_30612206_30612380_30615348_30615540_30616277
H1_mix_00024359	chr14	+	6081	15	FSM	ENSG00000092140.16	ENST00000206595.11	5770	15	-26	-285	-26	285	multi-exon	TRUE	canonical	3	366	junction_1	35	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAATCTGTGATGGAACT	2	True	NA	NA	False	TTTAAA	-39	NA	30559131	30620349	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_30559273_30581075_30581117_30586717_30586816_30589382_30589485_30592322_30592448_30593473_30593640_30597419_30597527_30598482_30598600_30601769_30601895_30601998_30602132_30605504_30605813_30607887_30608070_30612206_30612380_30615348_30615540_30616277
H1_mix_00024360	chr14	+	5522	11	ISM	ENSG00000092140.16	ENST00000206595.11	5770	15	33165	-108	0	108	3prime_fragment	FALSE	canonical	3	386	junction_3	31.3370387879902	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCTTACAAGGGCTATTT	NA	False	NA	11	True	AATAAA	-21	NA	30592322	30620172	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_+_30592448_30593473_30593640_30597419_30597527_30598482_30598600_30601769_30601895_30601998_30602132_30605504_30605813_30607887_30608070_30612206_30612380_30615348_30615540_30616277
H1_mix_00024362	chr14	+	2073	24	FSM	ENSG00000092108.22	ENST00000679102.1	2049	24	-24	0	-11	0	multi-exon	FALSE	canonical	2	9	junction_16	109.244371494433	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGAAACATTTCAGAAA	NA	False	NA	NA	False	NA	NA	NA	30622279	30735774	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
H1_mix_00024363	chr14	+	2150	25	FSM	ENSG00000092108.22	ENST00000676509.1	2126	25	-24	0	-11	0	multi-exon	FALSE	canonical	3	7	junction_15	111.568107935616	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGAAACATTTCAGAAA	NA	False	NA	NA	False	NA	NA	NA	30622279	30735774	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700190_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
H1_mix_00024364	chr14	+	4195	24	FSM	ENSG00000092108.22	ENST00000678802.1	4171	24	-24	0	-11	0	multi-exon	FALSE	canonical	3	391	junction_11	58.8152726330162	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAACATTTCAGAAATAAAA	NA	False	NA	NA	False	ATTAAA	-2	NA	30622279	30735779	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
H1_mix_00024365	chr14	+	4265	24	FSM	ENSG00000092108.22	ENST00000678516.1	4241	24	-24	0	-11	0	multi-exon	FALSE	canonical	3	391	junction_11	57.4276235540871	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATTTCAGAAATAAAATTT	NA	False	NA	NA	False	ATTAAA	-5	NA	30622279	30735782	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
H1_mix_00024366	chr14	+	2104	24	FSM	ENSG00000092108.22	ENST00000544052.6	2058	24	-39	-7	-11	0	multi-exon	FALSE	canonical	3	84	junction_1	99.7876952383559	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTCAACATTGTTCATT	NA	False	NA	NA	False	ATTAAA	-19	NA	30622279	30735796	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_30622400_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
H1_mix_00024367	chr14	+	3073	22	FSM	ENSG00000092108.22	ENST00000678716.1	3296	22	-24	247	-11	-247	multi-exon	FALSE	canonical	1	1	junction_1	118.128624313018	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTACTAATAGTATTTGAAA	NA	False	NA	NA	False	NA	NA	NA	30622279	30736945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_30622400_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
H1_mix_00024368	chr14	+	3201	11	FSM	ENSG00000092108.22	ENST00000469043.2	4736	11	-4	1539	0	-1539	multi-exon	FALSE	canonical	3	52	junction_10	127.315552859814	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATAATGTCTGTTTGTCC	-13	True	NA	NA	False	NA	NA	NA	30622310	30660400	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30658082
H1_mix_00024370	chr14	+	2182	25	FSM	ENSG00000092108.22	ENST00000677340.1	2171	25	-11	0	0	0	multi-exon	FALSE	canonical	3	7	junction_15	142.363329928508	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGAAACATTTCAGAAA	-13	True	NA	NA	False	NA	NA	NA	30622310	30735774	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_30622463_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700190_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
H1_mix_00024371	chr14	+	2213	25	FSM	ENSG00000092108.22	ENST00000458591.7	2190	25	-23	0	0	0	multi-exon	FALSE	canonical	3	391	junction_11	57.993878388633	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATAGGTTATGATTGAAG	NA	False	NA	NA	False	GATAAA	-23	NA	30622295	30735850	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
H1_mix_00024373	chr14	+	574	2	FSM	ENSG00000092108.22	ENST00000553280.1	574	2	0	0	0	0	multi-exon	FALSE	canonical	3	544	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATTTCAACATTGTTCA	NA	False	NA	NA	False	ATTAAA	-17	NA	30734493	30735794	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_30734859_30735585
H1_mix_00024374	chr14	+	2860	11	FSM	ENSG00000100473.18	ENST00000644874.2	2860	11	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_8	38.9902551928043	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCTTACTTTTATTACT	5	True	NA	21	True	AATAAA	-22	NA	30874558	30890618	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_30874973_30875055_30875104_30877571_30877729_30878810_30878945_30879422_30879486_30880451_30880497_30880586_30880735_30884552_30884657_30885393_30885621_30885795_30886313_30889615
H1_mix_00024375	chr14	+	2536	12	FSM	ENSG00000100473.18	ENST00000396618.9	2536	12	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	55.5540091612144	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCTTACTTTTATTACT	5	True	NA	21	True	AATAAA	-22	NA	30874558	30890618	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_30874592_30874915_30874973_30875055_30875104_30877571_30877729_30878810_30878945_30879422_30879486_30880451_30880497_30880586_30880735_30884552_30884657_30885393_30885621_30885795_30886313_30889615
H1_mix_00024376	chr14	+	2129	6	FSM	ENSG00000100473.18	ENST00000468826.2	2129	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	135.47634479864	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGGCTTACTTTTATTA	193	False	NA	19	True	AATAAA	-20	NA	30880586	30890616	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_30880735_30884552_30884657_30884909_30885042_30885393_30885621_30885795_30886313_30889615
H1_mix_00024377	chr14	+	4060	6	FSM	ENSG00000100478.16	ENST00000542754.7	4060	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	3.81575680566778	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCATTCTGAGTAGTGTGA	-1	True	NA	27	True	AATAAA	-24	NA	31025648	31096450	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_31025788_31066125_31066335_31069842_31069930_31072904_31072974_31080572_31080585_31092906
H1_mix_00024378	chr14	+	1991	10	FSM	ENSG00000151413.17	ENST00000547839.5	2001	10	10	0	4	0	multi-exon	FALSE	canonical	0	0	junction_6	19.1136949157753	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGTCAATGGAGTGCGA	-8	True	NA	NA	False	NA	NA	NA	31561407	31860273	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_31561548_31562067_31562216_31565013_31565049_31599288_31599380_31673354_31673395_31673483_31673575_31826628_31826715_31846470_31846592_31850118_31850202_31859117
H1_mix_00024379	chr14	+	3050	11	FSM	ENSG00000151413.17	ENST00000281081.12	3040	11	-16	6	3	0	multi-exon	FALSE	canonical	3	47	junction_10	7.0774289116882	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAAACTGCTATATCTGAA	-28	True	NA	2	True	AATAAA	-18	NA	31561387	31861218	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_31561548_31562067_31562216_31565013_31565049_31599288_31599380_31673354_31673395_31673483_31673575_31787779_31787874_31826628_31826715_31846470_31846592_31850118_31850202_31859117
H1_mix_00024380	chr14	+	4824	7	FSM	ENSG00000100852.14	ENST00000556611.5	4824	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	59.2126581812444	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTTCAGTAGTATACTTCA	-20	True	NA	NA	False	AAAAAG	-24	NA	32076966	32155011	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_32077054_32090501_32094387_32117142_32117288_32146262_32146341_32149901_32150034_32152422_32152529_32154620
H1_mix_00024381	chr14	+	5744	5	FSM	ENSG00000100852.14	ENST00000396582.6	5786	5	42	0	42	0	multi-exon	FALSE	canonical	0	0	junction_1	69.8891980208673	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGACTTCTGTTTAATTCC	37	False	NA	17	True	AATAAA	-20	NA	32077115	32159728	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_32077436_32146262_32146341_32149901_32150034_32152422_32152529_32154620
H1_mix_00024382	chr14	+	9589	7	FSM	ENSG00000100852.14	ENST00000345122.8	9589	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	54.5814885184427	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGACTTCTGTTTAATTCC	1	True	NA	17	True	AATAAA	-20	NA	32077303	32159728	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_32077436_32090501_32094387_32117139_32117288_32146262_32146341_32149901_32150034_32152422_32152529_32154620
H1_mix_00024383	chr14	+	7808	7	NIC	ENSG00000100852.14	novel	9589	7	NA	NA	54	793	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	66.5782747348312	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTTGTTTCTTTGTTTA	60	False	NA	15	True	TATAAA	-29	NA	32077362	32158009	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_32077436_32090501_32094387_32117142_32117288_32146262_32146341_32149901_32150034_32152422_32152529_32154620
H1_mix_00024389	chr14	+	2187	16	FSM	ENSG00000100883.13	ENST00000216774.11	2187	16	0	0	0	0	multi-exon	FALSE	canonical	3	687	junction_12	53.7548344079137	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTTGTTAACTTTCTTTA	-15	True	NA	38	True	AATAAA	-23	NA	34982991	35029567	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_34983216_34996676_34996788_34999557_34999650_35000935_35001021_35007282_35007388_35008626_35008694_35008773_35008832_35011508_35011660_35013345_35013495_35013801_35013903_35014743_35014831_35018691_35018766_35018965_35019075_35022909_35023081_35028087_35028184_35029060
H1_mix_00024392	chr14	+	620	3	NIC	ENSG00000151327.13	novel	540	2	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	171	junction_2	53	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGGGAATTTTGTATCA	9	True	NA	15	True	AATAAA	-27	NA	35046274	35050396	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_35046407_35046504_35046629_35050032
H1_mix_00024393	chr14	+	858	6	FSM	ENSG00000151327.13	ENST00000382406.7	858	6	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_1	60.7005766035216	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAAAAGCCAGATCTGAAA	-4	True	NA	34	True	NA	NA	NA	35046377	35081387	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_35046407_35046504_35046629_35053277_35053452_35077149_35077217_35078926_35079025_35081021
H1_mix_00024394	chr14	+	614	2	FSM	ENSG00000151327.13	ENST00000554052.2	540	2	-75	1	0	-1	multi-exon	FALSE	canonical	3	171	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATTGGGAATTTTGTATC	-4	True	NA	14	True	AATAAA	-26	NA	35046377	35050395	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_35046629_35050032
H1_mix_00024395	chr14	+	784	1	FSM	ENSG00000279434.1	ENST00000624600.1	2025	1	359	882	359	-882	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATGAAGTGTACAACAGAT	NA	False	NA	NA	False	NA	NA	NA	35086393	35087177	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_35086400_35087200
H1_mix_00024399	chr14	+	6139	7	FSM	ENSG00000100890.16	ENST00000250377.11	6118	7	-21	0	-4	0	multi-exon	FALSE	canonical	3	52	junction_2	89.3246264413621	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTACTTTTATCATCT	-36	True	NA	7	True	AATAAA	-21	NA	35122542	35277614	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_35122636_35122951_35124232_35127478_35127612_35180669_35180778_35266726_35266876_35270400_35270597_35273434
H1_mix_00024400	chr14	+	1399	7	FSM	ENSG00000100902.11	ENST00000540871.5	912	7	-497	10	-497	0	multi-exon	FALSE	canonical	3	72	junction_1	1019.88143374065	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCTTTTGGAAAATAATTG	NA	False	NA	NA	False	AATAAA	-5	NA	35278135	35317457	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_35278719_35307993_35308089_35308913_35308996_35310739_35310896_35312880_35313060_35314360_35314456_35317248
H1_mix_00024401	chr14	+	373	2	FSM	ENSG00000100902.11	ENST00000628955.1	364	2	-9	0	-9	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGATACGTTAAACAAACGG	89	False	NA	NA	False	NA	NA	NA	35292307	35293080	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_35292553_35292952
H1_mix_00024402	chr14	+	987	6	FSM	ENSG00000100902.11	ENST00000622405.4	978	6	-9	0	-9	0	multi-exon	FALSE	canonical	3	30	junction_1	1117.03063521105	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGTTGTTTTCACCTCC	89	False	NA	NA	False	AATAAA	-26	NA	35292307	35317478	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_35292553_35308913_35308996_35310739_35310896_35312880_35313060_35314360_35314456_35317248
H1_mix_00024404	chr14	+	1023	7	FSM	ENSG00000100902.11	ENST00000261479.9	1023	7	0	0	0	0	multi-exon	FALSE	canonical	3	2494	junction_5	149.775109191525	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCCTATTTTAAAATTTAT	-35	True	NA	NA	False	AATAAA	-41	NA	35292381	35317493	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_35292553_35307993_35308089_35308913_35308996_35310739_35310896_35312880_35313060_35314360_35314456_35317248
H1_mix_00024405	chr14	+	609	1	FSM	ENSG00000259022.2	ENST00000554535.2	372	1	-268	31	-268	-31	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCGAAAGTAAAAATGGAGC	242	False	NA	NA	False	AATACA	-42	NA	35429991	35430600	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_35430000_35430600
H1_mix_00024407	chr14	+	2628	10	FSM	ENSG00000100916.14	ENST00000216807.12	2637	10	9	0	9	0	multi-exon	TRUE	canonical	3	124	junction_6	10.7404853098618	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTAGTGTCTTGGATTAC	10	True	NA	23	True	AATAAA	-20	NA	35826346	35871963	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_35826659_35831409_35831501_35832977_35833106_35834843_35834924_35862589_35862687_35863869_35863954_35864934_35865000_35865721_35865762_35867905_35868033_35870359
H1_mix_00024409	chr14	+	2647	11	FSM	ENSG00000100916.14	ENST00000552677.5	1544	11	0	-1103	0	0	multi-exon	FALSE	canonical	1	4	junction_2	52.1544820700963	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTAGTGTCTTGGATTAC	1	True	NA	23	True	AATAAA	-20	NA	35826440	35871963	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_35826659_35829794_35829908_35831409_35831501_35832977_35833106_35834843_35834924_35862589_35862687_35863869_35863954_35864934_35865000_35865721_35865762_35867905_35868033_35870359
H1_mix_00024410	chr14	+	1823	2	FSM	ENSG00000100916.14	ENST00000552849.1	290	2	37	-1570	37	0	multi-exon	FALSE	canonical	3	131	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTAGTGTCTTGGATTAC	NA	False	NA	23	True	AATAAA	-20	NA	35867813	35871963	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_35868033_35870359
H1_mix_00024412	chr14	+	523	1	FSM	ENSG00000188831.4	ENST00000557188.1	1219	1	666	30	419	-30	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTGAGTACCTTTAAAA	NA	False	NA	NA	False	AATAAA	-5	NA	36371830	36372353	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_36371800_36372400
H1_mix_00024413	chr14	+	6007	13	FSM	ENSG00000151338.19	ENST00000684589.1	5983	13	-24	0	0	0	multi-exon	FALSE	canonical	3	43	junction_12	9.21464715668605	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATATTTCAATGCAATTC	1	True	NA	9	True	AATAAA	-21	NA	37197912	37551259	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_37198105_37247102_37247241_37247828_37247908_37266937_37267170_37268657_37268794_37270419_37270526_37285317_37285448_37308055_37308090_37308348_37308520_37369516_37369625_37422854_37422950_37499907_37500139_37546904
H1_mix_00024416	chr14	+	932	4	FSM	ENSG00000258649.2	ENST00000687886.1	939	4	7	0	7	0	multi-exon	FALSE	canonical	3	35	junction_3	3.74165738677394	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGACTCCTGCCTCAACA	8	False	NA	18	True	AATAAA	-26	NA	38190989	38202925	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_38191232_38193240_38193324_38199045_38199512_38202784
H1_mix_00024417	chr14	+	8347	1	Genic_Genomic	ENSG00000258649.2	novel	NA	NA	NA	NA	3850	254	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACAAAAATATGGTTTGT	3851	False	NA	-4	True	CATAAA	-15	NA	38194832	38203179	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr14_+_38194800_38203200
H1_mix_00024419	chr14	+	1292	9	FSM	ENSG00000092208.19	ENST00000396249.7	801	9	-20	-471	1	-6	multi-exon	FALSE	canonical	3	66	junction_8	108.757471007743	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAAGCTCAGCACTTTTT	NA	False	NA	0	True	AATAAA	-16	NA	39114285	39136967	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_39114476_39114828_39114914_39117998_39118089_39118539_39118600_39122429_39122544_39124991_39125037_39128279_39128349_39131957_39132069_39136439
H1_mix_00024420	chr14	+	1114	9	FSM	ENSG00000092208.19	ENST00000250379.13	1094	9	-20	0	1	0	multi-exon	FALSE	canonical	3	49	junction_5	115.565998459755	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTTTTGTTTTTTGTT	NA	False	NA	25	True	NA	NA	NA	39114285	39136775	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_39114476_39114828_39114914_39117998_39118089_39118539_39118600_39122429_39122544_39128279_39128349_39131957_39132069_39133660_39133720_39136439
H1_mix_00024421	chr14	+	1337	10	FSM	ENSG00000092208.19	ENST00000308317.12	1320	10	-17	0	0	0	multi-exon	FALSE	canonical	3	316	junction_5	32.8366702572025	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGCACTTTTTTTTTTT	-8	True	NA	6	True	AATAAA	-22	NA	39114305	39136973	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_39114476_39114828_39114914_39117998_39118089_39118539_39118600_39122429_39122544_39124991_39125037_39128279_39128349_39131957_39132069_39133660_39133720_39136439
H1_mix_00024422	chr14	+	3561	9	FSM	ENSG00000100941.9	ENST00000216832.9	3537	9	-24	0	0	0	multi-exon	FALSE	canonical	3	638	junction_6	29.7297725352886	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTTTGCACAGCAATCTG	-14	True	NA	4	True	ATTAAA	-15	NA	39175229	39183220	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_39175393_39176077_39176150_39176526_39176596_39177411_39177485_39177592_39177688_39177840_39177917_39179090_39179247_39179323_39179463_39180502
H1_mix_00024426	chr14	+	2769	23	NIC	ENSG00000150527.18	novel	3860	24	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	37.0923852201812	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGGCTCTATTAACTTTT	-1	True	NA	19	True	AATAAA	-20	NA	39267073	39350694	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_39267190_39276933_39277066_39279336_39279359_39279448_39279538_39291018_39291097_39293270_39293382_39293999_39294072_39294924_39295030_39299863_39299987_39302128_39302250_39303477_39303525_39304290_39304382_39308448_39308588_39313339_39313442_39314738_39314800_39315682_39315719_39317943_39318012_39319208_39319292_39326863_39327023_39345903_39346027_39347712_39347772_39348742_39348978_39350097
H1_mix_00024428	chr14	+	2765	23	FSM	ENSG00000150527.18	ENST00000348007.7	2762	23	-3	0	0	0	multi-exon	FALSE	canonical	3	51	junction_18	25.6723232649128	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGGCTCTATTAACTTTT	16	True	NA	19	True	AATAAA	-20	NA	39267410	39350694	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_39267523_39276933_39277066_39279336_39279359_39279448_39279538_39291018_39291097_39293270_39293382_39293999_39294072_39294924_39295030_39299863_39299987_39302128_39302250_39303477_39303525_39304290_39304382_39308448_39308588_39313339_39313442_39314738_39314800_39315682_39315719_39317943_39318012_39319208_39319292_39326863_39327023_39345903_39346027_39347712_39347772_39348742_39348978_39350097
H1_mix_00024429	chr14	+	818	4	FSM	ENSG00000251363.3	ENST00000651006.1	599	4	-219	0	-219	0	multi-exon	FALSE	canonical	3	103	junction_3	26.9196334794266	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACATTTTCACAATTTGAA	NA	False	NA	-1	True	AATAAA	-11	NA	40954473	41149309	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_40954953_40962789_40962843_40974339_40974391_41149074
H1_mix_00024430	chr14	+	574	4	NNC	ENSG00000251363.3	novel	599	4	NA	NA	8	-8258	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_3	42.4578222082418	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTTTCTGACACTTCG	NA	False	NA	-3	True	AATAAA	-19	NA	40954700	41141051	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_40954953_40962789_40962843_40974339_40974391_41140833
H1_mix_00024431	chr14	+	4663	6	FSM	ENSG00000165379.14	ENST00000298119.9	4417	6	-246	0	-246	0	multi-exon	FALSE	canonical	2	10	junction_1	2.56124969497314	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCACATTGCCTGATTTG	1603	False	NA	13	True	AATAAA	-19	NA	41606629	41904549	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_41608563_41766853_41767030_41886605_41888011_41891249_41891963_41898916_41898961_41904157
H1_mix_00024432	chr14	+	500	1	FSM	ENSG00000259051.1	ENST00000554987.1	333	1	155	-322	155	322	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAGAAAAAAGAAA	NA	False	NA	NA	False	AATAAA	-22	NA	43300417	43300917	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_43300400_43300900
H1_mix_00024433	chr14	+	2948	5	FSM	ENSG00000179476.8	ENST00000325192.8	2935	5	-13	0	-13	0	multi-exon	TRUE	canonical	3	60	junction_1	3.93700393700591	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAAGGCTCCCAGATTTTC	NA	False	NA	17	True	AATAAA	-30	NA	44897261	44907257	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_44897569_44900434_44900960_44903206_44903297_44904394_44904530_44905366
H1_mix_00024434	chr14	+	4998	5	FSM	ENSG00000198718.13	ENST00000555607.1	4992	5	-6	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	2.59807621135332	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATGTATGTTTCTATTT	-12	True	NA	NA	False	ATTAAA	-35	NA	44962207	45008147	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_44964468_44995745_44995903_44999362_44999498_45004060_45004367_45006007
H1_mix_00024435	chr14	+	6424	20	FSM	ENSG00000198718.13	ENST00000361462.7	6424	20	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_11	4.18280347080116	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTGAGAGGTGTCCTG	-30	True	NA	16	True	AATAAA	-17	NA	44962189	45074431	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_44964468_44995745_44995903_44999362_44999498_45004060_45004367_45006007_45006268_45008912_45009146_45011974_45012076_45025782_45025873_45027298_45027475_45028175_45028330_45032222_45032377_45043685_45043792_45044634_45044871_45046544_45046704_45052435_45052563_45054430_45054550_45066577_45066768_45068423_45068644_45071711_45071799_45073295
H1_mix_00024436	chr14	+	3908	2	FSM	ENSG00000198718.13	ENST00000555945.1	3908	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-1	True	NA	NA	False	NA	NA	NA	44962218	44997404	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_44964468_44995745
H1_mix_00024441	chr14	+	2937	15	NIC	ENSG00000185246.18	novel	3174	15	NA	NA	2	0	combination_of_known_junctions	TRUE	canonical	3	93	junction_8	85.3336787833144	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATGAATTTATTTTG	14	True	NA	24	True	AATAAA	-21	NA	45084129	45115601	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_45084250_45095220_45095564_45096102_45096229_45096886_45097006_45102528_45102697_45107450_45107617_45108414_45108523_45109615_45109781_45109893_45109994_45110093_45110221_45110548_45110818_45112317_45112503_45114182_45114258_45114493_45114615_45114856
H1_mix_00024444	chr14	+	2975	5	FSM	ENSG00000185246.18	ENST00000554785.1	2121	5	-168	-686	-168	0	multi-exon	FALSE	canonical	3	288	junction_2	22.4429833132763	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGCCTCTCCCCTACCC	NA	False	NA	NA	False	NA	NA	NA	45109563	45116282	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_45110221_45110548_45110818_45112317_45112503_45114182_45114258_45114493
H1_mix_00024452	chr14	+	424	2	Genic_Genomic	ENSG00000276168.1	novel	299	1	NA	NA	-17861	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAACAATAAATACGTTA	NA	False	NA	-12	True	NA	NA	NA	49568718	49586878	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr14_+_49568844_49586579
H1_mix_00024454	chr14	+	1500	4	FSM	ENSG00000165501.17	ENST00000298288.11	1502	4	0	2	0	0	multi-exon	FALSE	canonical	3	175	junction_2	151.633329669524	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGTGTTAACTTTTT	1	True	NA	12	True	ATTAAA	-15	NA	49598939	49614670	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_49599204_49602369_49602469_49607399_49608122_49614255
H1_mix_00024457	chr14	+	6070	12	FSM	ENSG00000165516.11	ENST00000555443.5	1756	12	-634	-3680	-596	410	multi-exon	FALSE	canonical	3	595	junction_5	67.6521242634359	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAATTCCACATCATTAA	83	False	NA	NA	False	AATAAA	-22	NA	49767533	49786795	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_49768622_49771593_49771674_49774560_49774679_49777838_49777955_49778177_49778260_49778410_49778495_49779594_49779807_49780212_49780323_49780702_49780776_49782369_49782458_49782541_49782595_49782829
H1_mix_00024459	chr14	+	591	1	FSM	ENSG00000278002.1	ENST00000618845.1	1308	1	4	713	4	-713	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCCGCCACCTCCGTCCT	401	False	NA	NA	False	NA	NA	NA	49863075	49863666	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_49863100_49863700
H1_mix_00024461	chr14	+	2918	5	FSM	ENSG00000125375.18	ENST00000554438.6	2908	5	-10	0	-10	0	multi-exon	FALSE	canonical	3	136	junction_4	60.8173494983134	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTGGAGATTTCATACC	-16	True	NA	15	True	AATAAA	-25	NA	50312313	50327957	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_50312390_50321482_50321595_50322510_50322720_50323944_50324117_50325608
H1_mix_00024462	chr14	+	2954	6	FSM	ENSG00000125375.18	ENST00000557421.7	2944	6	-10	0	-10	0	multi-exon	FALSE	canonical	3	61	junction_1	92.2119298138804	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTGGAGATTTCATACC	-16	True	NA	15	True	AATAAA	-25	NA	50312313	50327957	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_50312390_50314590_50314627_50321482_50321595_50322510_50322720_50323944_50324117_50325608
H1_mix_00024463	chr14	+	628	5	FSM	ENSG00000125375.18	ENST00000554951.6	666	5	-8	46	-8	-46	multi-exon	FALSE	canonical	1	1	junction_1	113.38292419937	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGACAGCACTGCCTTCTC	746	False	NA	-48	True	AAAAAG	-20	NA	50321310	50325677	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_50321377_50321482_50321595_50322510_50322720_50323944_50324117_50325608
H1_mix_00024464	chr14	+	2853	14	FSM	ENSG00000198513.14	ENST00000441560.6	2853	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	10.4745394328992	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTACTGAATTTGAAAAT	235	False	NA	NA	False	ATTAAA	-32	NA	50533025	50633049	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_50533368_50560126_50560300_50587830_50588079_50590940_50591076_50591534_50591640_50593845_50593897_50595575_50595633_50613258_50613352_50614372_50614512_50620598_50620727_50621842_50621900_50623176_50623249_50628030_50628463_50632228
H1_mix_00024465	chr14	+	2120	13	ISM	ENSG00000198513.14	ENST00000553509.2	3778	14	490	1444	-23	0	3prime_fragment	FALSE	canonical	3	25	junction_6	6.45927412502537	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTATAAAGTATTTGTCTA	NA	False	NA	-22	True	NA	NA	NA	50560041	50632573	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_+_50560300_50587830_50588079_50590940_50591076_50591534_50591640_50593845_50593897_50595575_50595633_50613258_50613352_50614372_50614512_50620598_50620727_50621842_50621900_50623176_50623249_50628030_50628463_50632228
H1_mix_00024468	chr14	+	1477	11	FSM	ENSG00000131969.15	ENST00000353130.5	1477	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	99.8859850029022	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTATGCCATTTTGT	41	False	NA	21	True	AATAAA	-21	NA	50872159	50904970	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_50872279_50880451_50880572_50881595_50881627_50885613_50885660_50885765_50885896_50886646_50886685_50888823_50888904_50901828_50901912_50903388_50903468_50904073_50904193_50904338
H1_mix_00024474	chr14	+	4874	14	FSM	ENSG00000139926.16	ENST00000395718.6	4828	14	-46	0	-46	0	multi-exon	FALSE	canonical	3	52	junction_4	14.6840492295262	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCTTTTTGATTATTAGA	NA	False	NA	25	True	AATAAA	-21	NA	51651811	51730727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_51651997_51689690_51689936_51698141_51698233_51701055_51701136_51702511_51702589_51704748_51704936_51708077_51708234_51711530_51711597_51712482_51712552_51715324_51715500_51720054_51720391_51721948_51722081_51725778_51725871_51727744
H1_mix_00024475	chr14	+	4800	14	FSM	ENSG00000139926.16	ENST00000344768.10	4800	14	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	17.780049986285	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCTTTTTGATTATTAGA	-19	True	NA	25	True	AATAAA	-21	NA	51651909	51730727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_51651997_51689690_51689936_51698141_51698233_51701055_51701160_51702511_51702589_51704748_51704936_51708077_51708234_51711530_51711597_51712482_51712552_51715324_51715500_51720054_51720391_51721948_51722081_51725778_51725871_51727744
H1_mix_00024478	chr14	+	2130	4	FSM	ENSG00000186469.9	ENST00000556766.6	3573	4	29	1414	0	1220	multi-exon	FALSE	canonical	3	120	junction_2	29.4089933334837	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGGAAGAGAAAAAGTT	-2	True	NA	NA	False	AAAAAG	-5	NA	51860640	51968381	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_51860791_51877616_51877658_51950649_51950766_51966558
H1_mix_00024479	chr14	+	7007	8	FSM	ENSG00000087302.9	ENST00000261700.8	7007	8	0	0	0	0	multi-exon	FALSE	canonical	3	2201	junction_3	113.525866871738	404	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGACCTTGTCTTTTCCTAG	-10	True	NA	NA	False	AATAAA	-21	NA	51989545	52010694	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_51989701_51991316_51991442_51993722_51993823_51998493_51998581_51999707_51999797_52001797_52001867_52004193_52004243_52004361
H1_mix_00024481	chr14	+	2910	2	FSM	ENSG00000168229.4	ENST00000306051.3	2957	2	47	0	47	0	multi-exon	FALSE	canonical	1	2	junction_1	0	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGCAGAGGAAATTACTT	39	False	NA	NA	False	AATAAA	-16	NA	52267744	52276724	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_52268661_52274730
H1_mix_00024493	chr14	+	866	8	FSM	ENSG00000100526.21	ENST00000458126.6	845	8	-21	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	267.898396823139	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTGTGTCTCTTTCATT	-14	True	NA	16	True	NA	NA	NA	54396978	54420218	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_54397078_54399893_54399977_54401523_54401580_54408744_54408790_54411483_54411707_54415898_54415931_54417850_54417952_54419991
H1_mix_00024494	chr14	+	848	8	FSM	ENSG00000100526.21	ENST00000335183.11	841	8	-7	0	0	0	multi-exon	FALSE	canonical	3	699	junction_1	49.2034510155206	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTGTGTCTCTTTCATT	7	True	NA	16	True	NA	NA	NA	54396999	54420218	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_54397078_54399893_54399977_54401523_54401580_54408744_54408790_54411483_54411707_54415898_54415931_54417847_54417952_54419991
H1_mix_00024497	chr14	+	1940	6	FSM	ENSG00000100532.13	ENST00000679442.1	1937	6	-3	0	0	0	multi-exon	FALSE	canonical	3	89	junction_3	75.0269284990396	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTAGCAGAATGTGATCT	-20	True	NA	NA	False	ATTAAA	-29	NA	54509901	54539087	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_54510064_54522453_54522594_54530048_54530406_54530902_54531051_54537721_54537830_54538062
H1_mix_00024498	chr14	+	1217	6	NIC	ENSG00000100532.13	novel	1962	6	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	110.035267073789	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTAAGAGTTTGGCCTTT	-4	True	NA	21	True	CATAAA	-23	NA	54509917	54538614	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_54510064_54522453_54522594_54530048_54530227_54530902_54531051_54537721_54537830_54538117
H1_mix_00024501	chr14	+	6565	11	FSM	ENSG00000020577.14	ENST00000251091.9	6565	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	2.05182845286832	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGTGTGTCTTTTTCTTT	7	False	NA	6	True	AATACA	-13	NA	54567611	54793311	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_54568113_54702061_54702581_54748814_54748925_54751450_54751538_54760160_54760495_54764454_54764541_54770103_54770223_54774933_54775136_54776413_54776541_54784536_54784621_54788915
H1_mix_00024507	chr14	+	1734	4	FSM	ENSG00000131981.16	ENST00000556438.6	1734	4	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	12.2836838484589	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTCTCAATATGTCATTT	661	False	NA	9	True	AATAAA	-16	NA	55137187	55145413	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_55138369_55140274_55140364_55142583_55142750_55145115
H1_mix_00024512	chr14	+	4644	43	NIC	ENSG00000126777.18	novel	4728	44	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	441	junction_33	156.28625837809	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGACTTGTTCTAATTTTT	-19	True	NA	31	True	AATAAA	-20	NA	55580206	55684579	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_55580355_55612018_55612572_55616516_55616655_55617963_55618135_55619181_55619313_55627911_55628029_55629956_55630098_55633234_55633342_55634525_55634659_55636448_55636537_55637197_55637365_55637778_55637848_55639184_55639223_55639912_55640004_55640373_55640443_55640932_55640971_55641126_55641209_55641691_55641761_55646972_55647008_55648024_55648116_55648801_55648871_55649775_55649814_55650327_55650419_55650568_55650638_55651889_55651928_55652849_55652941_55653016_55653086_55653558_55653597_55656041_55656133_55658545_55658615_55659665_55659704_55661521_55661613_55663954_55664042_55667240_55667331_55670728_55670810_55671565_55671656_55671784_55671878_55672629_55672702_55672928_55673013_55675834_55675919_55678351_55678445_55679564_55679686_55684098
H1_mix_00024513	chr14	+	4671	43	NIC	ENSG00000126777.18	novel	4793	46	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	133	junction_1	221.613569672614	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGACTTGTTCTAATTTTT	-9	True	NA	31	True	AATAAA	-20	NA	55580216	55684579	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_55580355_55601756_55601881_55612018_55612572_55616516_55616655_55617963_55618135_55619181_55619313_55627911_55628029_55629956_55630098_55633234_55633342_55634525_55634659_55636448_55636537_55637197_55637365_55637778_55637848_55639184_55639223_55639912_55640004_55640373_55640443_55640932_55640971_55641126_55641209_55641691_55641761_55646972_55647008_55648024_55648116_55648801_55648871_55649775_55649814_55650327_55650419_55650568_55650638_55651889_55651928_55652849_55652941_55653016_55653086_55653558_55653597_55656041_55656133_55658545_55658615_55659665_55659704_55661521_55661613_55667240_55667331_55670728_55670810_55671565_55671656_55671784_55671878_55672629_55672702_55672928_55673013_55675834_55675919_55678351_55678445_55679564_55679686_55684098
H1_mix_00024514	chr14	+	4641	43	NIC	ENSG00000126777.18	novel	4728	44	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	299	junction_38	194.662618772563	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGACTTGTTCTAATTTTT	-19	True	NA	31	True	AATAAA	-20	NA	55580206	55684579	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_55580355_55612018_55612572_55616516_55616655_55617963_55618135_55619181_55619313_55627911_55628029_55629956_55630098_55633234_55633342_55634525_55634659_55636448_55636537_55637197_55637365_55637778_55637848_55639184_55639223_55639912_55640004_55640373_55640443_55640932_55640971_55641126_55641209_55641691_55641761_55646972_55647008_55648024_55648116_55648801_55648871_55649775_55649814_55650327_55650419_55650568_55650638_55651889_55651928_55652849_55652941_55653016_55653086_55653558_55653597_55656041_55656133_55658545_55658615_55659665_55659704_55661521_55661613_55667240_55667331_55670728_55670810_55671565_55671656_55671784_55671878_55672629_55672702_55672928_55673013_55673171_55673256_55675834_55675919_55678351_55678445_55679564_55679686_55684098
H1_mix_00024516	chr14	+	4449	42	FSM	ENSG00000126777.18	ENST00000438792.6	4449	42	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_32	147.370693682073	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGACTTGTTCTAATTTTT	41	False	NA	31	True	AATAAA	-20	NA	55580314	55684579	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_55580355_55612018_55612572_55616516_55616655_55617963_55618135_55619181_55619313_55627911_55628029_55629956_55630098_55633234_55633342_55634525_55634659_55636448_55636537_55637197_55637365_55637778_55637848_55639184_55639223_55639912_55640004_55640373_55640443_55640932_55640971_55641126_55641209_55641691_55641761_55646972_55647008_55648024_55648116_55648801_55648871_55649775_55649814_55650327_55650419_55650568_55650638_55651889_55651928_55652849_55652941_55653016_55653086_55653558_55653597_55656041_55656133_55658545_55658615_55659665_55659704_55661521_55661613_55667240_55667331_55670728_55670810_55671565_55671656_55671784_55671878_55672629_55672702_55672928_55673013_55675834_55675919_55678351_55678445_55679564_55679686_55684098
H1_mix_00024521	chr14	+	2485	9	FSM	ENSG00000126777.18	ENST00000334975.13	2485	9	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	370.420706764619	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTCTAATTTTTATTG	6370	False	NA	35	True	AATAAA	-24	NA	55667650	55684583	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_55668804_55670728_55670810_55671565_55671878_55672629_55672702_55672928_55673013_55675834_55675919_55678351_55678445_55679564_55679686_55684098
H1_mix_00024522	chr14	+	5299	4	FSM	ENSG00000126777.18	ENST00000556631.1	5299	4	0	0	0	0	multi-exon	FALSE	canonical	3	1195	junction_1	45.8281815286426	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGACTTGTTCTAATTTTT	548	False	NA	31	True	AATAAA	-20	NA	55671314	55684579	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_55675919_55678351_55678445_55679564_55679686_55684098
H1_mix_00024525	chr14	+	682	5	FSM	ENSG00000139946.10	ENST00000559044.5	774	5	92	0	92	0	multi-exon	FALSE	canonical	1	2	junction_1	38.75161286966	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGGGGGCTTCACCGAGG	184	False	NA	NA	False	NA	NA	NA	56117905	56290344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_56118081_56178334_56178465_56279675_56279778_56288436_56288635_56290267
H1_mix_00024526	chr14	+	6420	6	FSM	ENSG00000139946.10	ENST00000267460.9	5871	6	-473	-76	124	76	multi-exon	FALSE	canonical	3	74	junction_1	9.2520268049763	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGGATTTTTGTCATGA	-9	True	NA	22	True	AATAAA	-37	NA	56117937	56301600	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_56118738_56178334_56178465_56279675_56279778_56288436_56288635_56290267_56290457_56296599
H1_mix_00024530	chr14	+	626	2	FSM	ENSG00000053770.12	ENST00000556995.1	610	2	-16	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCATCTGTGACTCAGC	-1	True	NA	NA	False	NA	NA	NA	57268923	57274723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_57269070_57274243
H1_mix_00024532	chr14	+	11664	8	FSM	ENSG00000053770.12	ENST00000261558.8	11675	8	0	11	0	-11	multi-exon	FALSE	canonical	3	225	junction_4	31.9948975523872	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACAATTGAGTGGGTGTA	0	True	NA	-4	True	AATAAA	-6	NA	57268970	57298731	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_57269389_57274243_57274890_57280194_57280423_57282088_57282229_57282933_57283020_57283111_57283231_57286222_57286320_57288801
H1_mix_00024533	chr14	+	6858	4	FSM	ENSG00000139977.14	ENST00000555166.5	1294	4	34	-5598	-8	22	multi-exon	FALSE	canonical	3	22	junction_1	105.607238809131	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACTGATTTCAAATTTGT	-17	True	NA	33	True	AATAAA	-41	NA	57390577	57415928	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_57390706_57396751_57396876_57399827_57399884_57409378
H1_mix_00024535	chr14	+	555	4	FSM	ENSG00000131966.14	ENST00000556312.5	540	4	-21	6	0	-6	multi-exon	TRUE	canonical	3	412	junction_3	17.2111075245674	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCATATTGTGTATGGC	3	True	NA	NA	False	AATAAA	-12	NA	58200148	58209251	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_58200295_58202854_58202928_58207935_58208019_58208998
H1_mix_00024537	chr14	+	3124	8	FSM	ENSG00000131966.14	ENST00000557711.5	1584	8	-339	-1201	-339	299	multi-exon	TRUE	canonical	3	303	junction_2	42.1048254542233	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACATTTATATTGACCTCA	NA	False	NA	NA	False	AGTAAA	-9	NA	58212694	58235935	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_58213699_58215204_58215285_58219693_58219730_58223621_58223702_58223782_58223857_58230398_58230481_58232065_58232268_58234369
H1_mix_00024542	chr14	+	955	11	FSM	ENSG00000100567.13	ENST00000216455.9	955	11	0	0	0	0	multi-exon	FALSE	canonical	3	2475	junction_10	227.092161907891	286	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTGAAGTTTGGTTAATA	-23	True	NA	26	True	ATTAAA	-15	NA	58244842	58272004	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_58244942_58247749_58247833_58252118_58252243_58257744_58257847_58257924_58257999_58260947_58261021_58263704_58263771_58267473_58267521_58270417_58270486_58270933_58270999_58271850
H1_mix_00024544	chr14	+	4052	24	FSM	ENSG00000032219.19	ENST00000395168.7	4051	24	-1	0	0	0	multi-exon	FALSE	canonical	3	4	junction_22	15.6718475392343	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTGTTTTTCGTTTGTT	13	True	NA	NA	False	NA	NA	NA	58298554	58372226	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_58298701_58299797_58299861_58301579_58301691_58304943_58305010_58306021_58306113_58318541_58318622_58318710_58318806_58323484_58323618_58328236_58328317_58329527_58329605_58330002_58330170_58344694_58344768_58346410_58346506_58347019_58347118_58347646_58347879_58351072_58351324_58353657_58353856_58359131_58359217_58360900_58361043_58364169_58365301_58365517_58365623_58366023_58366069_58366882_58367030_58371885
H1_mix_00024550	chr14	+	236	3	NNC	ENSG00000196860.8	novel	607	5	NA	NA	6793	11	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	0.5	24	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACCATACAGTATAAACAAC	6738	False	NA	NA	False	AAAACA	-37	NA	58402722	58408624	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_58402762_58407325_58407427_58408528
H1_mix_00024552	chr14	+	855	7	FSM	ENSG00000100578.18	ENST00000555833.5	846	7	-9	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	17.9976850363225	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTAAAAATATGTAGTTCT	6	True	NA	NA	False	NA	NA	NA	58427718	58448491	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_58427814_58429362_58429434_58430647_58430718_58432387_58432458_58442705_58442881_58443953_58444176_58448339
H1_mix_00024553	chr14	+	5301	30	NIC	ENSG00000100578.18	novel	8558	31	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_29	13.956617002163	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAAGTCTGATTGTGAGT	19	True	NA	NA	False	AATAAA	-15	NA	58427731	58548119	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_58428464_58429362_58429434_58430647_58430718_58432387_58432458_58442705_58442881_58443953_58444176_58448339_58448494_58450578_58450747_58453349_58453474_58456701_58456811_58457758_58457980_58458472_58458546_58459842_58460071_58460985_58461161_58465834_58466030_58467734_58467923_58470612_58470724_58472198_58472280_58474606_58474798_58477122_58477242_58482512_58482713_58487006_58487167_58487886_58488110_58488620_58488875_58490163_58490241_58492143_58492276_58498782_58498961_58508554_58508710_58512521_58512628_58547780
H1_mix_00024554	chr14	+	5192	31	NIC	ENSG00000100578.18	novel	8558	31	NA	NA	4	57	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	13.7697333146127	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAAACAAGAAACTGCTAA	24	True	NA	NA	False	AATATA	-4	NA	58427736	58548555	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_58427858_58429362_58429434_58430647_58430718_58432387_58432458_58442705_58442881_58443953_58444176_58448339_58448494_58450578_58450747_58453349_58453474_58456701_58456811_58457758_58457980_58458472_58458546_58459842_58460071_58460985_58461161_58465834_58466030_58467734_58467923_58470612_58470724_58472198_58472280_58474606_58474798_58477122_58477242_58482512_58482713_58487006_58487167_58487886_58488110_58488620_58488875_58490163_58490241_58492143_58492276_58498782_58498961_58508554_58508710_58512521_58512628_58540070_58540137_58547780
H1_mix_00024556	chr14	+	3936	4	FSM	ENSG00000165617.15	ENST00000395153.8	3828	4	-108	0	-108	0	multi-exon	FALSE	canonical	3	44	junction_3	17.7200451466693	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGCTGGTTATTGGTG	6	False	NA	5	True	TATAAA	-23	NA	58637853	58648321	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_58638548_58640735_58640869_58641591_58641748_58645368
H1_mix_00024557	chr14	+	4059	4	FSM	ENSG00000165617.15	ENST00000335867.4	2571	4	-337	-1151	-120	0	multi-exon	FALSE	canonical	3	28	junction_3	25.2498624858742	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGCTGGTTATTGGTG	3777	False	NA	5	True	TATAAA	-23	NA	58637841	58648321	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_58638548_58640735_58640869_58641591_58641748_58645257
H1_mix_00024558	chr14	+	460	1	FSM	ENSG00000213598.4	ENST00000480540.1	376	1	-24	-60	-24	60	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCCTACAAATGATTCTCA	-2	True	NA	NA	False	AATAAA	-33	NA	58794629	58795089	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_58794600_58795100
H1_mix_00024560	chr14	+	5991	25	NNC	ENSG00000100592.16	novel	5890	25	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	24.2124566195906	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATATGCTTTCTATGAAT	16	True	NA	22	True	AATAAA	-22	NA	59188711	59371403	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_59188915_59263440_59263661_59291216_59291307_59315279_59315352_59320489_59320585_59322891_59323226_59324127_59324239_59324350_59324455_59325663_59325731_59325959_59326078_59326509_59326649_59326932_59326992_59330500_59330689_59331208_59331509_59331812_59331921_59340073_59340181_59347538_59347624_59352525_59352633_59353875_59353965_59355164_59355334_59359396_59359505_59360801_59360863_59363650_59363783_59367428_59367600_59368649
H1_mix_00024562	chr14	+	1647	7	FSM	ENSG00000050130.18	ENST00000425728.6	1636	7	-11	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	183.733200290228	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAATTTCAATGTTTTGA	-32	True	NA	5	True	AATAAA	-13	NA	59484491	59504703	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_59484594_59486730_59486805_59487673_59487829_59495017_59495225_59498726_59498909_59501190_59501268_59503853
H1_mix_00024565	chr14	+	2151	7	FSM	ENSG00000050130.18	ENST00000554271.5	2137	7	-14	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	238.39509689216	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTCAATGTTTTGACA	7	True	NA	7	True	AATAAA	-15	NA	59484530	59504705	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_59485117_59486712_59486805_59487673_59487829_59495017_59495225_59498726_59498909_59501190_59501268_59503853
H1_mix_00024567	chr14	+	1951	5	FSM	ENSG00000050130.18	ENST00000554721.1	1951	5	0	0	0	0	multi-exon	FALSE	canonical	3	562	junction_1	77.29610274781	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAATTTCAATGTTTTGA	2670	False	NA	5	True	AATAAA	-13	NA	59487193	59504703	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_59487829_59495017_59495225_59498726_59498909_59501190_59501268_59503853
H1_mix_00024569	chr14	+	4712	2	FSM	ENSG00000126773.13	ENST00000391611.6	4073	2	-107	-532	-99	532	multi-exon	FALSE	canonical	3	57	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGCATTATTCATTTCT	NA	False	NA	NA	False	AAAAAG	-26	NA	60091811	60111689	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_60092420_60107585
H1_mix_00024574	chr14	+	4125	4	FSM	ENSG00000100614.18	ENST00000325658.3	4125	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	94.7839648885823	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGATCCTTGCTTTTTG	17	True	NA	6	True	AATAAA	-19	NA	60249440	60288555	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_60249678_60250379_60250482_60282683_60283538_60285623
H1_mix_00024576	chr14	+	2513	8	FSM	ENSG00000020426.11	ENST00000261245.9	2648	8	-10	145	9	-145	multi-exon	FALSE	canonical	3	379	junction_6	37.7164501543411	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTATAAATGTATTTTAA	-19	True	NA	NA	False	AAGAAA	-22	NA	60734750	60969820	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_60734952_60796216_60796370_60798086_60798161_60808324_60808429_60811986_60812128_60818721_60818848_60879713_60879836_60968228
H1_mix_00024583	chr14	+	3946	15	FSM	ENSG00000100644.17	ENST00000337138.9	3946	15	0	0	0	0	multi-exon	FALSE	canonical	3	685	junction_1	116.847646313392	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTTGATCAGCTTTTAT	-9	True	NA	19	True	AATAAA	-19	NA	61695512	61748258	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_61695840_61720381_61720573_61721508_61721655_61721738_61721824_61726705_61726819_61727452_61727656_61732417_61732525_61734137_61734286_61736888_61737110_61738086_61738374_61740504_61740628_61740754_61741189_61744704_61744814_61745690_61745818_61746933
H1_mix_00024585	chr14	+	3555	14	FSM	ENSG00000100644.17	ENST00000323441.10	3555	14	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_13	245.731055178807	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTTGATCAGCTTTTAT	96	False	NA	19	True	AATAAA	-19	NA	61695776	61748258	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_61695840_61720381_61720573_61721508_61721655_61721738_61721824_61726705_61726819_61727452_61727656_61732417_61732525_61734137_61734286_61736888_61737110_61738086_61738374_61740504_61740628_61740754_61741189_61744704_61744814_61746933
H1_mix_00024587	chr14	+	2593	10	FSM	ENSG00000023608.5	ENST00000216294.5	2593	10	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_4	25.8929419812513	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGCAGTCACAATTGTT	3	True	NA	13	True	AATAAA	-18	NA	61762419	61796428	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_61762589_61766875_61767036_61767211_61767353_61768635_61768741_61776094_61776254_61778071_61778141_61778847_61778911_61782246_61782398_61792806_61792903_61794948
H1_mix_00024591	chr14	+	669	4	FSM	ENSG00000054654.20	ENST00000553455.1	674	4	0	5	0	-5	multi-exon	FALSE	canonical	3	10	junction_3	0.816496580927726	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAGTTGCCAAGTGAGTT	6064	False	NA	NA	False	AATAAA	-20	NA	64119429	64122517	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_64119610_64120926_64121062_64122011_64122134_64122285
H1_mix_00024593	chr14	+	4093	19	ISM	ENSG00000054654.20	ENST00000394768.6	11095	63	110725	-3	-10414	0	3prime_fragment	FALSE	canonical	3	79	junction_1	21.4695448956118	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTTGTACTGAATTCT	-13	True	NA	15	True	ATTAAA	-18	NA	64186339	64226433	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_+_64186580_64188549_64188709_64190070_64190238_64202800_64202964_64208757_64208946_64209427_64209579_64209941_64210125_64211960_64212099_64212810_64213006_64214193_64214471_64216247_64216388_64218397_64218513_64219207_64219411_64220436_64220638_64221575_64221705_64223188_64223381_64224460_64224548_64224995_64225046_64225318
H1_mix_00024594	chr14	+	3301	14	FSM	ENSG00000054654.20	ENST00000554805.6	3481	14	180	0	180	0	multi-exon	FALSE	canonical	3	83	junction_12	22.0344002164663	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTCTGTTGTACTGAAT	NA	False	NA	12	True	ATTAAA	-15	NA	64209299	64226430	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_64209579_64209941_64210125_64211960_64212099_64212810_64213006_64214193_64214471_64216247_64216388_64218397_64218513_64219207_64219411_64220436_64220638_64221575_64221705_64223188_64223381_64224460_64224548_64224995_64225046_64225318
H1_mix_00024595	chr14	+	2619	11	FSM	ENSG00000054654.20	ENST00000458046.6	2669	11	50	0	50	0	multi-exon	FALSE	canonical	3	14	junction_6	50.4119033562511	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTGTTGTACTGAATTC	12	False	NA	14	True	ATTAAA	-17	NA	64214193	64226432	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_64214471_64215285_64215355_64216247_64216388_64218397_64218513_64219207_64219411_64220436_64220638_64221533_64221705_64223188_64223381_64224460_64224548_64224995_64225046_64225318
H1_mix_00024596	chr14	+	3084	9	FSM	ENSG00000054654.20	ENST00000441438.2	3084	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	43.1231883677448	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTCTGTTGTACTGAAT	1250	False	NA	12	True	ATTAAA	-15	NA	64215431	64226430	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_64216388_64218397_64218513_64219207_64219411_64220436_64220638_64221533_64221705_64223188_64223381_64224460_64224548_64224998_64225046_64225318
H1_mix_00024597	chr14	+	6818	27	FSM	ENSG00000100714.17	ENST00000545908.6	6814	27	-4	0	-4	0	multi-exon	TRUE	canonical	2	40	junction_26	309.628315544593	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTTCAGTTCCCTTTT	110	False	NA	6	True	AATAAA	-19	NA	64388026	64463457	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_64388469_64400792_64400878_64411089_64411150_64412471_64412526_64415357_64415495_64415638_64415740_64417887_64418025_64419813_64419926_64424803_64424932_64425729_64425828_64426018_64426193_64427336_64427474_64430183_64430231_64431531_64431640_64431786_64431862_64435568_64435672_64439095_64439173_64440125_64440267_64441384_64441454_64442053_64442166_64442262_64442403_64444692_64444735_64448216_64448318_64449444_64449623_64453753_64453862_64454722_64454876_64459758
H1_mix_00024599	chr14	+	3154	28	FSM	ENSG00000100714.17	ENST00000652337.1	3154	28	0	0	0	0	multi-exon	FALSE	canonical	3	1366	junction_8	123.394990705209	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGCCTTAACAGACTGT	18	True	NA	9	True	AATAAA	-38	NA	64388352	64460025	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_64388469_64400792_64400878_64411089_64411150_64412471_64412526_64415357_64415495_64415638_64415740_64417887_64418025_64419813_64419926_64424803_64424932_64425729_64425828_64426018_64426193_64427336_64427474_64430183_64430231_64431531_64431640_64431786_64431862_64435568_64435672_64439095_64439173_64440125_64440267_64441384_64441454_64442053_64442166_64442262_64442403_64444692_64444735_64448216_64448318_64449444_64449623_64453753_64453862_64454722_64454876_64458213_64458308_64459758
H1_mix_00024603	chr14	+	453	2	FSM	ENSG00000126804.14	ENST00000556818.1	453	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGCGGCCCCTTCGCCTTC	-13	True	NA	NA	False	NA	NA	NA	64503711	64504854	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_64504092_64504781
H1_mix_00024604	chr14	+	4119	3	FSM	ENSG00000126804.14	ENST00000358738.3	4119	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	63	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTCTGTATATTACTT	262	False	NA	12	True	AATAAA	-26	NA	64504573	64533690	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_64504947_64521486_64523403_64531860
H1_mix_00024606	chr14	+	3642	2	FSM	ENSG00000126804.14	ENST00000683701.1	3642	2	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTTTTAATGTGAATTAC	-14	True	NA	NA	False	AATAAA	-19	NA	64504769	64524951	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_64504947_64521486
H1_mix_00024609	chr14	+	957	3	FSM	ENSG00000165807.8	ENST00000554400.1	1686	3	729	0	12	0	multi-exon	FALSE	canonical	1	1	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGATGGTTATTCGTTGT	NA	False	NA	5	True	AGTAAA	-16	NA	64586836	64589380	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_64587373_64588103_64588296_64589151
H1_mix_00024613	chr14	+	3045	4	FSM	ENSG00000126822.18	ENST00000484731.3	3045	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	28.6744175568088	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTGTGAACTCCTTCCT	NA	False	NA	21	True	NA	NA	NA	64737990	64744345	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_64738138_64738741_64738856_64741035_64742456_64742981
H1_mix_00024614	chr14	+	3120	4	ISM	ENSG00000126822.18	ENST00000471182.7	4702	17	10408	0	10	0	3prime_fragment	FALSE	canonical	3	26	junction_1	24.0878023535196	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTATGTGTGAACTCCTTC	NA	False	NA	19	True	NA	NA	NA	64738000	64744343	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_+_64738225_64738741_64738856_64741035_64742456_64742981
H1_mix_00024615	chr14	+	3530	4	FSM	ENSG00000258289.10	ENST00000549115.7	3518	4	-12	0	0	0	multi-exon	FALSE	canonical	3	1695	junction_2	238.009803719651	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTCTTCTTTTTACTT	-17	True	NA	16	True	AATAAA	-26	NA	64914442	64935368	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_64914535_64923990_64924127_64926009_64926081_64932137
H1_mix_00024616	chr14	+	3850	3	FSM	ENSG00000258289.10	ENST00000548752.7	439	3	0	-3411	0	363	multi-exon	FALSE	canonical	3	144	junction_2	1058	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTTCATGTTGTGAGCA	NA	False	NA	NA	False	NA	NA	NA	64914414	64935731	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_64914535_64923990_64924127_64932137
H1_mix_00024618	chr14	+	1109	4	FSM	ENSG00000258289.10	ENST00000551093.6	1023	4	-86	0	-24	0	multi-exon	FALSE	canonical	3	43	junction_3	940.650956637063	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGATTTGTTGAGATGAG	NA	False	NA	NA	False	NA	NA	NA	64914390	64944056	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_64914535_64923990_64924127_64926009_64926081_64943298
H1_mix_00024619	chr14	+	1771	3	FSM	ENSG00000258289.10	ENST00000551947.6	1521	3	-28	-222	0	222	multi-exon	FALSE	canonical	3	18	junction_2	1121	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCTCCAGTGATTCCAAT	NA	False	NA	NA	False	NA	NA	NA	64914414	64944813	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_64914535_64923990_64924127_64943298
H1_mix_00024622	chr14	+	4249	11	FSM	ENSG00000033170.17	ENST00000673929.1	4249	11	0	0	0	0	multi-exon	TRUE	canonical	3	77	junction_1	18.4813419426188	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCAACTGAGCGGAGGTA	-40	True	NA	15	True	AATAAA	-16	NA	65412729	65744121	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_65413215_65455620_65455719_65561336_65561767_65615977_65616094_65616210_65616374_65629491_65629607_65669242_65669481_65721774_65722022_65724146_65724324_65733230_65733382_65742092
H1_mix_00024624	chr14	+	3557	23	FSM	ENSG00000171723.16	ENST00000478722.6	3557	23	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_12	9.55324357534745	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAATGTGTTGGCCTCGTT	-5	True	NA	24	True	AATAAA	-27	NA	66508146	67181803	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_66508592_66681106_66681186_66776463_66776522_66824473_66824567_66879938_66880034_66916002_66916070_66922665_66922939_66924193_66924293_66965190_66965326_67023632_67023676_67058648_67058787_67088982_67089076_67100855_67100912_67110139_67110260_67111860_67111920_67113017_67113172_67122255_67122378_67143361_67143450_67159414_67159489_67165161_67165227_67168932_67169037_67179577_67179675_67180803
H1_mix_00024630	chr14	+	5468	15	FSM	ENSG00000072415.10	ENST00000261681.9	5468	15	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_10	12.8874642460756	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGAACTTGAAAGTTTTC	-1	True	NA	NA	False	ATTAAA	-39	NA	67241434	67336061	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_67241534_67269700_67269784_67279017_67279538_67292510_67292720_67301388_67301467_67301971_67302119_67302409_67302572_67303521_67303600_67312526_67312711_67316831_67316904_67317407_67317480_67320229_67320398_67321056_67321260_67323701_67323813_67332779
H1_mix_00024635	chr14	+	4316	29	NNC	ENSG00000054690.14	novel	6615	29	NA	NA	-132	-101	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_21	18.3973988844697	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTGCCTCTGGATTTAGA	7	True	NA	NA	False	NA	NA	NA	67533157	67587265	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_67533399_67541833_67541994_67555824_67555888_67557268_67557419_67559607_67559692_67561953_67562036_67562136_67562895_67569137_67569217_67569920_67570013_67571751_67571903_67572134_67572278_67573275_67573387_67573800_67573888_67574241_67574404_67575391_67575473_67575822_67576006_67576394_67576504_67577301_67577415_67578022_67578200_67578533_67578632_67579133_67579228_67579720_67579877_67580937_67581039_67582068_67582211_67583740_67583884_67583994_67584125_67585567_67585655_67585950_67586098_67587073
H1_mix_00024637	chr14	+	5555	20	FSM	ENSG00000054690.14	ENST00000557971.5	5555	20	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	12.1377139413891	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCTGAGTAACAGAAAAGTA	7311	False	NA	-84	True	TATAAA	-7	NA	67571062	67589440	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_67571903_67572134_67572278_67573275_67573387_67573800_67573888_67574241_67574404_67575391_67575473_67575822_67576006_67576394_67576504_67577301_67577415_67578022_67578200_67578533_67578632_67579133_67579312_67579720_67579877_67580937_67581039_67582068_67582211_67583740_67583884_67583994_67584125_67585567_67585655_67585950_67586098_67587073
H1_mix_00024638	chr14	+	2999	2	FSM	ENSG00000054690.14	ENST00000558214.1	2999	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTGTGTTTTGGAAG	NA	False	NA	9	True	AATAAA	-22	NA	67586410	67589533	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_67586950_67587073
H1_mix_00024639	chr14	+	1911	8	FSM	ENSG00000081181.8	ENST00000261783.4	1911	8	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_6	70.7398222289227	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTCTGAAATGTTGTTC	0	True	NA	10	True	AATAAA	-17	NA	67619919	67651708	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_67620089_67620893_67620967_67642185_67642364_67645642_67645803_67646643_67646739_67646920_67647026_67648046_67648184_67650714
H1_mix_00024643	chr14	+	1536	11	FSM	ENSG00000182185.19	ENST00000471583.6	1559	11	29	-6	0	-2	multi-exon	FALSE	canonical	3	9	junction_10	13.0633073913156	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTAGGTGTAAAGGAATTG	-9	True	NA	NA	False	AATAAA	-22	NA	67819807	68478099	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_67819854_67823541_67823628_67825463_67825578_67835079_67835197_67865002_67865140_67885868_67885989_67887020_67887205_68291883_68291981_68411423_68411528_68468171_68468251_68477647
H1_mix_00024651	chr14	+	5125	9	FSM	ENSG00000081177.19	ENST00000312994.9	5107	9	-20	2	-20	0	multi-exon	FALSE	canonical	3	20	junction_1	54.0069439979712	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGGCTGTAGGCAGATGT	230	False	NA	NA	False	AATAAA	-44	NA	69191745	69244018	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_69192040_69209423_69209804_69228815_69229073_69230471_69230599_69234699_69235032_69236045_69236153_69236406_69236543_69237574_69237932_69240883
H1_mix_00024656	chr14	+	711	1	FSM	ENSG00000280073.1	ENST00000624684.1	2299	1	1237	351	1237	-351	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTTGTTAACTCCATGA	NA	False	NA	NA	False	NA	NA	NA	69358246	69358957	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_69358200_69359000
H1_mix_00024657	chr14	+	5194	6	FSM	ENSG00000029364.12	ENST00000031146.8	5192	6	-2	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	55.4003610096541	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTTAATCTGAGTGGCT	-7	True	NA	17	True	ATTAAA	-14	NA	69398689	69462381	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_69399466_69424093_69424203_69453240_69453310_69454811_69454898_69455731_69455867_69458362
H1_mix_00024658	chr14	+	5401	7	FSM	ENSG00000029364.12	ENST00000336643.10	5399	7	-2	0	0	0	multi-exon	FALSE	canonical	3	87	junction_2	27.5887456925626	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTGGCTCATTACTTA	-7	True	NA	26	True	ATTAAA	-23	NA	69398689	69462390	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_69399466_69424093_69424203_69442068_69442267_69453240_69453310_69454811_69454898_69455731_69455867_69458362
H1_mix_00024659	chr14	+	5390	6	FSM	ENSG00000100647.8	ENST00000342745.5	5390	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	4.89897948556636	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGGAGATGTGATCCTT	0	True	NA	17	True	ATTAAA	-22	NA	69611595	69715144	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_69611829_69658512_69658714_69703394_69703593_69704603_69704743_69708676_69709105_69710953
H1_mix_00024662	chr14	+	3044	6	FSM	ENSG00000100650.16	ENST00000554465.5	3044	6	0	0	0	0	multi-exon	FALSE	canonical	3	1341	junction_1	217.727719870484	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTTGTCTGTTTGTCTG	NA	False	NA	13	True	AATAAA	-14	NA	69767092	69772004	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_69767256_69768137_69768283_69768603_69768675_69768797_69770541_69770994_69771106_69771193
H1_mix_00024668	chr14	+	1239	3	FSM	ENSG00000259033.2	ENST00000553791.2	1464	3	0	225	0	-225	multi-exon	FALSE	canonical	1	1	junction_2	3	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTTAACATTGTTGTAT	10	False	NA	NA	False	AATATA	-28	NA	70255642	70292103	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_70256190_70275295_70275361_70291476
H1_mix_00024673	chr14	+	963	2	FSM	ENSG00000259153.3	ENST00000653562.2	1019	2	49	7	49	-7	multi-exon	FALSE	canonical	3	47	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTATATATATAATACATT	24	True	NA	7	True	AATAAA	-17	NA	70809990	70815389	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_70810675_70815110
H1_mix_00024675	chr14	+	418	2	FSM	ENSG00000275630.1	ENST00000622856.1	284	2	-134	0	-134	0	multi-exon	FALSE	canonical	3	28	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGGCGTCTGATGATAGTT	NA	False	NA	8	True	CATAAA	-23	NA	70821869	70823984	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_70822123_70823819
H1_mix_00024680	chr14	+	7952	24	FSM	ENSG00000197555.10	ENST00000381232.8	7952	24	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	41.1559806686891	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTCGATAGAGAATTACT	23	True	NA	13	True	AATAAA	-18	NA	71320475	71741209	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_71320504_71321121_71321182_71512742_71512846_71529311_71529371_71587570_71589371_71618756_71618888_71624047_71624237_71650334_71650510_71658332_71658437_71661309_71661468_71671118_71671693_71672347_71672623_71685361_71685632_71698980_71699128_71702380_71702506_71705221_71705341_71709221_71709665_71723646_71723887_71724669_71724836_71730054_71730302_71733665_71733813_71735276_71735392_71738240_71738326_71739017
H1_mix_00024684	chr14	+	379	6	FSM	ENSG00000197555.10	ENST00000555652.5	379	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	90.6509790349779	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTTTTTCTGAAAGAAAG	8	False	NA	NA	False	NA	NA	NA	71320514	71587622	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_71320553_71321121_71321182_71413947_71414015_71512742_71512846_71529311_71529371_71587570
H1_mix_00024690	chr14	+	2591	14	NIC	ENSG00000119599.17	novel	2474	14	NA	NA	-89	-3	intron_retention	FALSE	canonical	2	37	junction_9	13.6689515576869	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATCATGGTGTGACATG	NA	False	NA	24	True	AATAAA	-9	NA	72926287	72959641	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_72926544_72937970_72938071_72939801_72939903_72940219_72940378_72941744_72941825_72942993_72943097_72945883_72946028_72947141_72947192_72951797_72951878_72954160_72954263_72954385_72954484_72955522_72955697_72956385_72956501_72958611
H1_mix_00024691	chr14	+	2470	14	FSM	ENSG00000119599.17	ENST00000358377.7	2474	14	4	0	4	0	multi-exon	FALSE	canonical	2	39	junction_9	13.3500880922564	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACCAGCTTTCATAGCCT	-7	True	NA	86	True	NA	NA	NA	72926467	72959703	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_72926544_72937970_72938071_72939801_72939903_72940219_72940378_72941744_72941825_72942993_72943097_72945883_72946028_72947141_72947192_72951797_72951878_72954163_72954263_72954385_72954484_72955522_72955697_72956385_72956501_72958611
H1_mix_00024692	chr14	+	1043	8	FSM	ENSG00000119707.14	ENST00000531500.5	1039	8	-4	0	-3	0	multi-exon	FALSE	canonical	3	24	junction_2	163.693965330779	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTGTTCTGACAACAAC	-8	True	NA	31	True	NA	NA	NA	73058528	73097100	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_73058706_73064971_73065094_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914
H1_mix_00024694	chr14	+	6861	17	FSM	ENSG00000119707.14	ENST00000532683.5	6848	17	-13	0	-3	0	multi-exon	TRUE	canonical	3	322	junction_6	106.003371850852	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGCAGAATTGCACTTAA	-8	True	NA	15	True	ATTAAA	-16	NA	73058528	73120129	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914_73097101_73099379_73099434_73099666_73103479_73105858_73106082_73106195_73106286_73107825_73107900_73109341_73109493_73110830_73111803_73112151_73112251_73114285_73114334_73119712
H1_mix_00024698	chr14	+	3469	6	FSM	ENSG00000119707.14	ENST00000527449.1	3469	6	0	0	0	0	multi-exon	FALSE	canonical	3	494	junction_1	79.3312044532289	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGGGACTCATATTCTT	1311	False	NA	14	True	ATTAAA	-16	NA	73107301	73121313	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_73107900_73109341_73109493_73110830_73111803_73112151_73112251_73114285_73114334_73119712
H1_mix_00024699	chr14	+	574	4	FSM	ENSG00000080815.19	ENST00000557293.5	576	4	2	0	2	0	multi-exon	FALSE	canonical	3	34	junction_1	124.357012937215	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTCAGTCAGCTTTTAT	-51	True	NA	NA	False	NA	NA	NA	73136438	73171007	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_73136580_73147794_73147877_73147966_73148107_73170796
H1_mix_00024700	chr14	+	1254	5	FSM	ENSG00000080815.19	ENST00000394157.7	1249	5	-5	0	-2	0	multi-exon	FALSE	canonical	3	144	junction_3	90.9958790275692	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCACAATCTAAGTGGGTT	-48	True	NA	NA	False	AATAAA	-14	NA	73136441	73174204	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_73136584_73147794_73147877_73147966_73148107_73170796_73171048_73173565
H1_mix_00024702	chr14	+	6029	12	FSM	ENSG00000080815.19	ENST00000324501.10	6018	12	-11	0	0	0	multi-exon	FALSE	canonical	3	144	junction_3	64.0374373974299	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCTAGTGTTTTTTAC	6	True	NA	7	True	AATAAA	-16	NA	73136495	73223691	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_73136584_73147794_73147877_73147966_73148107_73170796_73171048_73173565_73173708_73186852_73186921_73192643_73192865_73198030_73198130_73206385_73206473_73211768_73211943_73217125_73217245_73219133
H1_mix_00024703	chr14	+	2895	12	FSM	ENSG00000080815.19	ENST00000394164.5	3046	12	151	0	151	0	multi-exon	TRUE	canonical	1	4	junction_1	102.149056540264	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCTGTCCTGGTATTTT	221	False	NA	14	True	ATTAAA	-25	NA	73136967	73220401	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_73137224_73147794_73147877_73147966_73148095_73170796_73171048_73173565_73173708_73186852_73186921_73192643_73192865_73198030_73198130_73206385_73206473_73211768_73211943_73217125_73217245_73219133
H1_mix_00024705	chr14	+	5889	27	FSM	ENSG00000100767.17	ENST00000644200.2	5889	27	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	13.3912450424515	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCCAGTTTAATTAAACCA	-26	True	NA	17	True	AATAAA	-17	NA	73237505	73274623	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_73237593_73239772_73239833_73244643_73244760_73245635_73245697_73246072_73246176_73249983_73250115_73250906_73251031_73251485_73251567_73251663_73251837_73252017_73252142_73252648_73252776_73253753_73253962_73254512_73254696_73254876_73255019_73258978_73259060_73259268_73259546_73260708_73260830_73261155_73261295_73262349_73262828_73263644_73263783_73264210_73264336_73264587_73264727_73265369_73265508_73266500_73266629_73266722_73266832_73268556_73268724_73272494
H1_mix_00024707	chr14	+	4668	8	FSM	ENSG00000100767.17	ENST00000555700.1	4668	8	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	10.881551510024	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCCAGTTTAATTAAACCA	NA	False	NA	17	True	AATAAA	-17	NA	73262049	73274623	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_73263783_73264210_73264336_73264587_73264727_73265369_73265508_73266500_73266629_73266722_73266832_73268556_73268724_73272494
H1_mix_00024711	chr14	+	1755	3	FSM	ENSG00000184227.8	ENST00000311148.9	1686	3	-69	0	-69	0	multi-exon	FALSE	canonical	3	17	junction_1	1.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGAGTTTTTAAGATTTT	NA	False	NA	4	True	ATTAAA	-17	NA	73537073	73543796	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_73537879_73541492_73541696_73543049
H1_mix_00024712	chr14	+	1622	3	FSM	ENSG00000119673.16	ENST00000238651.10	1622	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	8	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGAGTTTTTAAGATTTT	0	True	NA	14	True	ATTAAA	-17	NA	73569212	73575655	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_73569884_73573387_73573591_73574907
H1_mix_00024713	chr14	+	1050	3	ISM	ENSG00000119673.16	ENST00000538782.2	1578	4	1678	-2	13	0	3prime_fragment	FALSE	canonical	3	32	junction_1	16.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGAGTTTTTAAGATTTT	14	True	NA	14	True	ATTAAA	-17	NA	73569297	73575655	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_+_73569397_73573387_73573591_73574907
H1_mix_00024714	chr14	+	1487	3	FSM	ENSG00000177465.5	ENST00000326303.5	1465	3	-22	0	-22	0	multi-exon	FALSE	canonical	3	11	junction_1	0.5	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTATTTTACGTAACTT	12	False	NA	7	True	ATTAAA	-20	NA	73591850	73595766	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_73592417_73593701_73593905_73595048
H1_mix_00024717	chr14	+	652	3	FSM	ENSG00000259065.2	ENST00000556194.2	656	3	4	0	4	0	multi-exon	TRUE	canonical	0	0	junction_1	1	346	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTTGATTTAACAAATAC	9	True	NA	NA	False	AAAACA	-40	NA	73787363	73803300	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_73787510_73789026_73789117_73802884
H1_mix_00024721	chr14	+	2559	10	FSM	ENSG00000140043.12	ENST00000267568.8	2559	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	43.9564880251616	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATGTTTTGGCTTATG	3	True	NA	9	True	AGTAAA	-17	NA	73851946	73885459	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_73852121_73858815_73858900_73860538_73860658_73874022_73874215_73876997_73877169_73879095_73879306_73880054_73880177_73881204_73881293_73882398_73882439_73884100
H1_mix_00024723	chr14	+	2453	12	FSM	ENSG00000119725.21	ENST00000555044.6	2623	12	0	170	0	73	multi-exon	FALSE	canonical	3	106	junction_10	28.7813070648926	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGATTTACCCTTAGG	11	True	NA	86	True	TTTAAA	-5	NA	73886858	73932351	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_73886916_73892026_73892209_73893796_73893933_73896315_73896535_73898070_73898263_73903959_73904111_73904901_73905084_73909340_73909431_73920979_73921106_73922065_73922207_73923394_73923523_73931502
H1_mix_00024724	chr14	+	891	6	FSM	ENSG00000119725.21	ENST00000554582.5	888	6	-3	0	-3	0	multi-exon	FALSE	canonical	3	8	junction_1	79.7335562984619	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTGTACAGTTGAAGGTT	1367	False	NA	NA	False	NA	NA	NA	73888246	73904035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_73888365_73892026_73892209_73893796_73893933_73896347_73896535_73898070_73898263_73903959
H1_mix_00024728	chr14	+	2133	12	FSM	ENSG00000119723.17	ENST00000334571.7	2109	12	-24	0	-21	0	multi-exon	FALSE	canonical	3	77	junction_6	6.68042657122685	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCATGTTTGGTGGCAGA	0	True	NA	NA	False	NA	NA	NA	73950277	73963670	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_73950496_73953434_73953570_73955450_73955510_73955804_73955929_73958146_73958278_73958970_73959079_73959161_73959225_73959414_73959523_73961172_73961376_73961454_73961571_73961736_73961904_73962969
H1_mix_00024729	chr14	+	482	4	FSM	ENSG00000119723.17	ENST00000557780.5	482	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	38.4216374224502	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTCTCTTTTTCTTCTT	9002	False	NA	7	True	AATAAA	-14	NA	73959498	73963108	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_73959523_73961172_73961376_73961454_73961571_73962969
H1_mix_00024737	chr14	+	2559	4	FSM	ENSG00000165898.14	ENST00000556816.6	2581	4	0	22	0	-22	multi-exon	FALSE	canonical	1	327	junction_3	262.024595961694	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGGCAGAGTGAGACTC	5	True	NA	NA	False	NA	NA	NA	74493764	74497084	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_74493846_74494049_74494153_74494274_74494391_74494825
H1_mix_00024744	chr14	+	4899	20	FSM	ENSG00000119596.18	ENST00000552421.5	4899	20	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	65.16214593733	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCCCTTTTCTCTTGTTT	3	True	NA	37	True	AATAAA	-42	NA	74763365	74836190	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_74764363_74778446_74778684_74780404_74780585_74781333_74782326_74802555_74802677_74809379_74809798_74809909_74810003_74810224_74810421_74811619_74811739_74812627_74812783_74816202_74816266_74816570_74816691_74816930_74817108_74817193_74817278_74818230_74818315_74821056_74821138_74824255_74824308_74829212_74829344_74835264_74835448_74835774
H1_mix_00024745	chr14	+	3202	11	FSM	ENSG00000119596.18	ENST00000547879.5	2316	11	0	-886	0	886	multi-exon	FALSE	canonical	3	213	junction_5	18.6	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTCAGTATAGCTTTGT	2813	False	NA	NA	False	NA	NA	NA	74809631	74823001	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_74809798_74809909_74810003_74810224_74810421_74811619_74811739_74812627_74812783_74816202_74816266_74816570_74816691_74816930_74817108_74817193_74817278_74818230_74818315_74821056
H1_mix_00024748	chr14	+	2827	15	FSM	ENSG00000119689.15	ENST00000334220.9	2813	15	-14	0	-1	0	multi-exon	FALSE	canonical	3	9	junction_9	3.99297853124962	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTTCCTGTATCTGTTC	-24	True	NA	8	True	ATTAAA	-18	NA	74881901	74903743	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_74882017_74882590_74882625_74885585_74885635_74889094_74889148_74889274_74889350_74889896_74889953_74891055_74891168_74892833_74892987_74893347_74893425_74894311_74894410_74898368_74898500_74899922_74899997_74900288_74900373_74901065_74901234_74902195
H1_mix_00024749	chr14	+	4318	8	FSM	ENSG00000119718.11	ENST00000266126.10	4304	8	-14	0	-14	0	multi-exon	FALSE	canonical	3	235	junction_6	21.2900283260133	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCAGTTTGTAAAGACACT	-39	True	NA	NA	False	AATAAA	-16	NA	75002906	75012366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_75003154_75003274_75003396_75003550_75003700_75004736_75004901_75005865_75005962_75006576_75006715_75007721_75007789_75009030
H1_mix_00024751	chr14	+	2118	4	FSM	ENSG00000170345.10	ENST00000303562.9	2104	4	-14	0	-12	0	multi-exon	FALSE	canonical	3	72	junction_2	5.35412613473634	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACCTTGTGCTCTTTTCA	267	False	NA	13	True	AATAAA	-21	NA	75278813	75282230	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_75279124_75279876_75280129_75280559_75280668_75280782
H1_mix_00024752	chr14	+	4345	2	FSM	ENSG00000170345.10	ENST00000555347.1	1280	2	-1373	-1692	-6	1049	multi-exon	FALSE	canonical	3	85	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCTGATCGTTCTGCAAA	273	False	NA	NA	False	AAAAAG	-40	NA	75278819	75283279	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_75280668_75280782
H1_mix_00024755	chr14	+	4026	10	FSM	ENSG00000119686.10	ENST00000238667.9	3629	10	4	-401	4	401	multi-exon	FALSE	canonical	3	21	junction_2	10.2632028788938	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCTTGCTGTGGCTGGGG	8	True	NA	NA	False	NA	NA	NA	75578623	75648568	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_75579642_75622078_75622221_75624611_75624753_75633628_75633697_75634909_75635014_75639351_75639463_75640954_75641061_75641181_75641294_75641842_75641899_75646400
H1_mix_00024756	chr14	+	3518	9	NIC	ENSG00000119686.10	novel	3629	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_5	12.3262930356211	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTCTGCCTTATCATTCA	4	True	NA	6	True	AATAAA	-14	NA	75578619	75648167	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_75579642_75622078_75622221_75624611_75624753_75633628_75633697_75634909_75635014_75640954_75641061_75641181_75641294_75641842_75641899_75646400
H1_mix_00024758	chr14	+	592	6	FSM	ENSG00000119685.20	ENST00000555290.5	592	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	68.5827966767177	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGACCTTCCTCCTGCCAGC	3	True	NA	NA	False	NA	NA	NA	75660991	75690282	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_75661027_75663054_75663224_75669415_75669523_75681544_75681628_75683549_75683657_75690191
H1_mix_00024759	chr14	+	698	3	FSM	ENSG00000119685.20	ENST00000556685.1	689	3	-9	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	72.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTCTCCCACAGAGGACG	-22	True	NA	NA	False	NA	NA	NA	75661223	75669530	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_75661638_75663054_75663224_75669415
H1_mix_00024760	chr14	+	5069	32	FSM	ENSG00000119685.20	ENST00000298832.14	4716	32	-353	0	-99	0	multi-exon	FALSE	canonical	3	124	junction_1	17.364549387826	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTTTTTTTCCCTTTA	NA	False	NA	4	True	AATAAA	-16	NA	75660892	75955079	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_75661388_75663054_75663224_75669415_75669523_75681544_75681628_75683549_75683657_75690191_75690323_75699187_75699271_75707017_75707088_75707622_75707708_75717860_75717963_75719734_75719827_75720595_75720704_75732337_75732420_75733988_75734051_75735194_75735290_75745094_75745209_75745489_75745582_75752892_75752956_75764614_75764773_75766061_75766369_75771733_75771855_75775483_75775631_75776746_75776851_75779574_75779703_75782486_75782574_75783146_75783531_75792915_75793101_75820006_75820162_75863666_75863863_75882684_75882903_75902141_75902225_75954423
H1_mix_00024761	chr14	+	4430	32	NIC	ENSG00000119685.20	novel	4716	32	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	49	junction_26	25.2787168894199	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCATTTTGCTTCCTCTTC	34	True	NA	18	True	TATAAA	-18	NA	75661279	75954824	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_75661388_75663054_75663224_75669415_75669523_75681544_75681628_75683549_75683657_75690191_75690323_75699187_75699271_75707017_75707088_75707622_75707708_75717860_75717963_75719734_75719827_75720595_75720704_75732337_75732420_75733988_75734051_75735194_75735290_75745094_75745209_75745489_75745582_75752892_75752956_75764614_75764773_75766061_75766369_75771733_75771855_75775483_75775631_75776746_75776851_75779574_75779703_75782486_75782574_75783146_75783531_75792912_75793101_75820006_75820162_75863666_75863863_75882684_75882903_75902141_75902225_75954423
H1_mix_00024762	chr14	+	4775	33	NIC	ENSG00000119685.20	novel	4716	32	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_18	35.0110334171601	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTTTTTTTCCCTTTA	-20	True	NA	4	True	AATAAA	-16	NA	75661225	75955079	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_75661388_75663054_75663224_75669415_75669523_75681544_75681628_75683549_75683657_75690191_75690323_75699187_75699271_75707017_75707088_75707622_75707708_75717860_75717963_75719734_75719827_75720595_75720704_75732337_75732420_75733988_75734051_75735194_75735290_75745094_75745209_75745489_75745582_75752892_75752956_75757830_75757870_75764614_75764773_75766061_75766369_75771733_75771855_75775483_75775631_75776746_75776851_75779574_75779703_75782486_75782574_75783146_75783531_75792915_75793101_75820006_75820162_75863666_75863863_75882684_75882903_75902141_75902225_75954423
H1_mix_00024763	chr14	+	4288	31	ISM	ENSG00000119685.20	ENST00000298832.14	4716	32	52	52575	20	0	5prime_fragment	FALSE	canonical	3	124	junction_1	17.3185834678629	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGTATTTCACTGTCTAT	52	True	NA	NA	False	TATAAA	-44	NA	75661297	75902504	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_+_75661388_75663054_75663224_75669415_75669523_75681544_75681628_75683549_75683657_75690191_75690323_75699187_75699271_75707017_75707088_75707622_75707708_75717860_75717963_75719734_75719827_75720595_75720704_75732337_75732420_75733988_75734051_75735194_75735290_75745094_75745209_75745489_75745582_75752892_75752956_75764614_75764773_75766061_75766369_75771733_75771855_75775483_75775631_75776746_75776851_75779574_75779703_75782486_75782574_75783146_75783531_75792915_75793101_75820006_75820162_75863666_75863863_75882684_75882903_75902141
H1_mix_00024767	chr14	+	879	4	FSM	ENSG00000119650.13	ENST00000556742.1	848	4	-31	0	0	0	multi-exon	FALSE	canonical	3	372	junction_3	32.2214559295855	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCCGTGTTTGAAACTCA	-17	True	NA	7	True	AATAAA	-15	NA	75985752	76059271	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_75985841_75988884_75988978_76022326_76022395_76058641
H1_mix_00024768	chr14	+	1008	10	FSM	ENSG00000119650.13	ENST00000679083.1	1008	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	151.302085205903	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCTCCATTTCTTTCCA	-17	True	NA	17	True	AATAAA	-17	NA	75985752	76083741	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_75985841_75986125_75986309_75988884_75988978_76022326_76022395_76058641_76058675_76059326_76059374_76082294_76082368_76082616_76082693_76083226_76083290_76083457
H1_mix_00024769	chr14	+	826	9	FSM	ENSG00000119650.13	ENST00000314067.11	816	9	-10	0	0	0	multi-exon	FALSE	canonical	3	320	junction_4	41.1187305251512	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTCCATTTCTTTCCAG	-17	True	NA	18	True	AATAAA	-18	NA	75985752	76083742	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_75985841_75988884_75988978_76022326_76022395_76058641_76058675_76059326_76059374_76082294_76082368_76082616_76082693_76083226_76083290_76083457
H1_mix_00024777	chr14	+	5667	8	ISM	ENSG00000089916.18	ENST00000261530.12	14021	10	2454	13980	22	-1644	internal_fragment	FALSE	canonical	3	161	junction_1	15.4536832674483	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCTAGGGTAGTGCTT	1828	False	NA	6	True	AATAAA	-14	NA	76154375	76200363	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_+_76155026_76166662_76166728_76171842_76172020_76173545_76173626_76176622_76176691_76177987_76178043_76180763_76180850_76195877
H1_mix_00024780	chr14	+	6459	7	FSM	ENSG00000071246.11	ENST00000167106.9	6449	7	-10	0	-10	0	multi-exon	FALSE	canonical	3	12	junction_5	5.1207638319124	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTAAGCCTTGTCTCCTT	-41	True	NA	27	True	AATAAA	-43	NA	76761457	76783015	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_76763131_76769962_76770052_76771189_76771247_76773136_76773212_76775891_76776274_76777958_76778072_76778945
H1_mix_00024781	chr14	+	732	5	FSM	ENSG00000071246.11	ENST00000556038.5	726	5	-6	0	-6	0	multi-exon	FALSE	canonical	3	12	junction_4	5.97390157267426	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAAGGATGTTTCTTCCC	1195	False	NA	NA	False	NA	NA	NA	76769874	76777999	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_76770052_76771189_76771247_76773136_76773212_76775891_76776274_76777958
H1_mix_00024785	chr14	+	4510	4	FSM	ENSG00000198894.8	ENST00000361786.7	4325	4	-185	0	-53	0	multi-exon	FALSE	canonical	3	160	junction_1	7.58653778449403	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCTTTTTGCTTTATA	NA	False	NA	10	True	AATAAA	-21	NA	77098072	77117287	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_77098362_77105656_77105845_77109811_77109982_77113424
H1_mix_00024790	chr14	+	929	8	FSM	ENSG00000100577.19	ENST00000349555.7	867	8	-135	73	-106	0	multi-exon	FALSE	canonical	3	11	junction_4	53.0832999604761	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCTGAAACTTGTTCCAC	455	False	NA	NA	False	NA	NA	NA	77320889	77331320	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_77321184_77324869_77324922_77326837_77326906_77327471_77327553_77329122_77329202_77329754_77329808_77330309_77330360_77331068
H1_mix_00024793	chr14	+	2564	3	FSM	ENSG00000100583.5	ENST00000216471.5	2984	3	-246	666	-246	229	multi-exon	FALSE	canonical	2	11	junction_1	1	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGATATGATGTTTCACC	5	True	NA	NA	False	NA	NA	NA	77377132	77391497	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_77379108_77380382_77380482_77391007
H1_mix_00024795	chr14	+	1337	9	FSM	ENSG00000100591.8	ENST00000216479.8	1337	9	0	0	0	0	multi-exon	TRUE	canonical	3	797	junction_7	51.8095973252061	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGTGTCTGGAACCTATGT	13	True	NA	39	True	AATAAA	-17	NA	77458092	77469472	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_77458270_77459615_77459807_77462159_77462243_77462641_77462760_77464597_77464687_77465538_77465668_77468082_77468185_77468456_77468509_77469076
H1_mix_00024796	chr14	+	783	5	FSM	ENSG00000100591.8	ENST00000555473.1	561	5	0	-222	0	0	multi-exon	FALSE	canonical	3	797	junction_3	69.8082194300929	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGTGTCTGGAACCTATGT	6459	False	NA	39	True	AATAAA	-17	NA	77464582	77469472	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_77464687_77465538_77465668_77468082_77468185_77468456_77468509_77469076
H1_mix_00024797	chr14	+	1019	1	FSM	ENSG00000258917.1	ENST00000554267.1	787	1	62	-294	62	294	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACAAATAAAATCATTTGC	NA	False	NA	NA	False	NA	NA	NA	77696652	77697671	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_77696700_77697700
H1_mix_00024798	chr14	+	420	4	FSM	ENSG00000119705.10	ENST00000613856.4	420	4	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	6851.80153114655	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTTGTCTAAATGTTT	0	True	NA	26	True	AATAAA	-14	NA	77708070	77717594	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_77708209_77710837_77710897_77715771_77715880_77717479
H1_mix_00024799	chr14	+	376	4	FSM	ENSG00000119705.10	ENST00000557342.6	376	4	0	0	0	0	multi-exon	FALSE	canonical	3	13033	junction_3	902.877006512453	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTCTAAATGTTTTTAT	8	True	NA	30	True	AATAAA	-18	NA	77708102	77717598	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_77708209_77710837_77710897_77715771_77715880_77717495
H1_mix_00024800	chr14	+	388	4	FSM	ENSG00000119705.10	ENST00000238688.9	394	4	-8	14	0	0	multi-exon	FALSE	canonical	3	2602	junction_3	5665.99954896653	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATAACTGAGAATTTTGT	0	True	NA	16	True	AATAAA	-4	NA	77708070	77717584	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_77708209_77710837_77710897_77715771_77715880_77717501
H1_mix_00024801	chr14	+	285	4	FSM	ENSG00000119705.10	ENST00000553981.1	285	4	0	0	0	0	multi-exon	FALSE	canonical	3	941	junction_2	6282.1247644054	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTCTAAATGTTTTTAT	83	False	NA	30	True	AATAAA	-18	NA	77708177	77717598	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_77708209_77710837_77710881_77715771_77715880_77717495
H1_mix_00024803	chr14	+	1994	10	FSM	ENSG00000063761.16	ENST00000341211.5	1972	10	-22	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	13.7921072437181	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGATTTGTCCATCATAAC	-2	True	NA	17	True	AATAAA	-17	NA	77800116	77933952	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_77800171_77818967_77819114_77822434_77822519_77887090_77887250_77899099_77899259_77907802_77907920_77924456_77924607_77925763_77925962_77931517_77931712_77933219
H1_mix_00024804	chr14	+	3350	4	FSM	ENSG00000063761.16	ENST00000555217.1	3560	4	-1	211	-1	-211	multi-exon	FALSE	canonical	3	37	junction_2	4.32049379893857	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAGCAGATTTTTCAGTG	NA	False	NA	NA	False	NA	NA	NA	77923230	77934801	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_77924607_77925763_77925962_77931517_77931712_77933219
H1_mix_00024806	chr14	+	5271	6	NIC	ENSG00000021645.20	novel	3085	7	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	7.88416133777081	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGTATGCTGATGCAC	12	True	NA	7	True	AATAAA	-14	NA	79279396	79864417	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_79280539_79467220_79467403_79663777_79663950_79697629_79697938_79805111_79805200_79861038
H1_mix_00024816	chr14	+	2060	13	NIC	ENSG00000042317.17	novel	1410	13	NA	NA	3	0	intron_retention	FALSE	canonical	3	15	junction_5	23.7814119756493	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAATATTACTTTTCTT	-26	True	NA	8	True	AATAAA	-18	NA	88385651	88438453	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_88385838_88391380_88391456_88393392_88393489_88396155_88396204_88415204_88415267_88416710_88416845_88426231_88426705_88427629_88427697_88429347_88429464_88431171_88431226_88433134_88433213_88437542_88437598_88437837
H1_mix_00024823	chr14	+	2530	17	FSM	ENSG00000100722.20	ENST00000555755.5	2529	17	-1	0	0	0	multi-exon	FALSE	canonical	3	76	junction_12	237.996980022857	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCTGTTAAAATATTTG	-15	True	NA	NA	False	NA	NA	NA	88563036	88611991	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88596733_88596809_88601923_88602084_88602827_88603046_88607242_88607364_88609266_88609404_88609714_88609804_88610833_88610941_88611744
H1_mix_00024824	chr14	+	17709	17	FSM	ENSG00000100722.20	ENST00000251038.10	18153	17	0	444	0	-444	multi-exon	FALSE	canonical	3	407	junction_10	172.532967864116	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGCCAATGGCCCCTGCT	-15	True	NA	NA	False	AATACA	-27	NA	88563036	88627152	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88596733_88596809_88601923_88602084_88602827_88603061_88607242_88607364_88609266_88609404_88609711_88609804_88610833_88610941_88611744
H1_mix_00024833	chr14	+	2076	13	FSM	ENSG00000165533.19	ENST00000346301.8	2058	13	-18	0	-13	0	multi-exon	FALSE	canonical	3	44	junction_4	12.3524626424585	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTCATTATTTTTTAAT	-25	True	NA	11	True	AATAAA	-19	NA	88824637	88877988	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_88824822_88839451_88839573_88840864_88840929_88841036_88841197_88843805_88843851_88852970_88853057_88857189_88857278_88861221_88861333_88870058_88870199_88871548_88871724_88872329_88872453_88875025_88875110_88877293
H1_mix_00024843	chr14	+	2356	16	NIC	ENSG00000042088.14	novel	2370	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	96	junction_1	96.7332184699525	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACTTTTATATGTTTTGG	6	True	NA	7	True	AATAAA	-16	NA	89955954	90043341	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_89956279_89963107_89963674_89966146_89966191_89967366_89967423_89971174_89971272_89975780_89975816_89980539_89980633_89984515_89984684_89985131_89985211_89988904_89989091_89989716_89989766_89991916_89991984_89993375_89993484_90019315_90019419_90033105_90033215_90043069
H1_mix_00024845	chr14	+	2200	15	FSM	ENSG00000042088.14	ENST00000555178.5	2200	15	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_5	135.540640791323	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCTAATAAAGTATTAGTT	20	True	NA	-19	True	NA	NA	NA	89956571	90043315	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_89956801_89963107_89963674_89966146_89966191_89967366_89967423_89971174_89971272_89980539_89980633_89984515_89984684_89985131_89985211_89988904_89989091_89989716_89989766_89991916_89991984_89993375_89993484_90019315_90019419_90033105_90033215_90043069
H1_mix_00024850	chr14	+	591	3	FSM	ENSG00000198668.14	ENST00000556757.5	588	3	-3	0	0	0	multi-exon	FALSE	canonical	3	9487	junction_2	196	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTCTTCCTGCTTGGT	-1	True	NA	NA	False	NA	NA	NA	90397028	90401613	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_90397234_90400064_90400096_90401258
H1_mix_00024851	chr14	+	1104	7	FSM	ENSG00000198668.14	ENST00000447653.8	1104	7	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	3999.33063843883	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATGAAAAATGAAAAAA	-1	True	NA	8	True	NA	NA	NA	90397028	90405072	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_90397234_90398990_90399088_90400064_90400096_90401258_90401403_90403861_90403969_90404378_90404515_90404688
H1_mix_00024852	chr14	+	4203	6	FSM	ENSG00000198668.14	ENST00000356978.9	4203	6	0	0	0	0	multi-exon	FALSE	canonical	3	8699	junction_5	425.749691720382	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGAACTGTGTAGGTTTC	-1	True	NA	39	True	AATAAA	-26	NA	90397028	90408268	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_90397234_90400064_90400096_90401258_90401403_90403861_90403969_90404378_90404515_90404688
H1_mix_00024857	chr14	+	839	7	FSM	ENSG00000133943.21	ENST00000519019.5	834	7	-5	0	-5	0	multi-exon	FALSE	canonical	1	1	junction_6	46.2313025268955	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGCATTACCAACACCCA	7	True	NA	-11	True	AATAAA	-5	NA	91114382	91167707	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_91114529_91145220_91145314_91147780_91147859_91157638_91157691_91160265_91160398_91167224_91167379_91167523
H1_mix_00024858	chr14	+	2612	14	NIC	ENSG00000133943.21	novel	2764	16	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	18.259471077325	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTACTCTTCGGAATAT	10	True	NA	23	True	AATAAA	-19	NA	91114385	91225355	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_91114529_91157638_91157691_91160265_91160398_91167224_91167379_91170002_91170202_91173288_91173440_91175933_91176057_91181185_91181390_91188909_91189171_91196374_91196475_91199756_91199906_91204705_91204826_91215404_91215557_91224683
H1_mix_00024866	chr14	+	2373	2	FSM	ENSG00000153485.6	ENST00000415050.3	2373	2	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTAGCATTTCTTTTCT	2	True	NA	5	True	AATACA	-18	NA	93185316	93188463	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_93185486_93186259
H1_mix_00024869	chr14	+	3509	11	FSM	ENSG00000012963.15	ENST00000013070.11	3494	11	-15	0	0	0	multi-exon	TRUE	canonical	3	232	junction_2	29.7430664189152	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTTTCAGATTGTTTT	-19	True	NA	14	True	AATAAA	-15	NA	93207240	93229215	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_93207442_93209823_93209958_93210647_93210709_93212031_93212128_93214928_93214983_93215175_93215282_93218526_93218736_93219211_93219362_93220248_93220412_93222312_93222375_93226942
H1_mix_00024878	chr14	+	631	5	NIC	ENSG00000165948.11	novel	647	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	32.5221078652661	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTAGTGTCGGTTCTCTG	7	True	NA	18	True	AATAAA	-16	NA	94081355	94102708	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_94081450_94096855_94096966_94100738_94100772_94101813_94101976_94102476
H1_mix_00024880	chr14	+	782	6	NIC	ENSG00000165948.11	novel	615	6	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	52	junction_3	39.7321028892255	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTAGTGTCGGTTCTCT	8	True	NA	17	True	AATAAA	-15	NA	94081356	94102707	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_94081450_94096886_94096966_94097494_94097679_94100738_94100772_94101813_94101976_94102476
H1_mix_00024888	chr14	+	834	4	FSM	ENSG00000235706.9	ENST00000439819.6	817	4	-24	7	-1	0	multi-exon	FALSE	canonical	3	11	junction_1	7.40870359029762	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATTGCTTTTTTGGGC	-26	True	NA	3	True	AATAAA	-15	NA	95157653	95179925	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_95157859_95158192_95158235_95158875_95159036_95179498
H1_mix_00024889	chr14	+	3153	2	FSM	ENSG00000235706.9	ENST00000671073.1	3358	2	21	184	-1	-184	multi-exon	FALSE	canonical	3	28	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATCTACCTTCCTTCCCTG	-4	True	NA	NA	False	NA	NA	NA	95157675	95181291	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_95159036_95179498
H1_mix_00024896	chr14	+	3554	3	NNC	ENSG00000250366.4	novel	3197	2	NA	NA	-225	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	191.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGATGTCTTTTCTTTCAA	NA	False	NA	24	True	AATAAA	-27	NA	95876166	95925571	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_95876597_95876844_95877178_95922780
H1_mix_00024901	chr14	+	2478	2	FSM	ENSG00000140057.9	ENST00000555570.1	1345	2	-25	-1108	-20	1108	multi-exon	FALSE	canonical	3	38	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATTGGGGCTGTGTTGGA	1	True	NA	10	True	ATTAAA	-17	NA	96392107	96400400	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_96392260_96398074
H1_mix_00024905	chr14	+	3288	9	FSM	ENSG00000090060.19	ENST00000557320.5	3264	9	-24	0	1	0	multi-exon	FALSE	canonical	3	1962	junction_7	93.3109720236586	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCCTGTATTTTTTA	-34	True	NA	8	True	AATAAA	-9	NA	96502376	96534885	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_96502601_96520054_96520229_96521005_96521073_96525309_96525392_96527429_96527540_96527952_96528007_96531474_96531587_96532330_96532421_96532510
H1_mix_00024906	chr14	+	1386	7	FSM	ENSG00000090060.19	ENST00000557471.5	1421	7	0	35	0	-35	multi-exon	FALSE	canonical	3	2070	junction_3	74.1681647788771	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAAATTTGGAAGCATTA	30	True	NA	NA	False	AATAAA	-29	NA	96502440	96532213	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_96502601_96520054_96520229_96521005_96521073_96525309_96525392_96527429_96527540_96527952_96528007_96531474
H1_mix_00024913	chr14	+	1779	14	FSM	ENSG00000100749.9	ENST00000553683.2	1816	14	37	0	-4	0	multi-exon	FALSE	canonical	3	33	junction_13	322.458694203545	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGTGGCTGTAAGGTT	-43	True	NA	33	True	AATAAA	-30	NA	96797340	96881612	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556_96860736_96876029_96876121_96877501_96877574_96881176
H1_mix_00024914	chr14	+	1677	13	FSM	ENSG00000100749.9	ENST00000216639.8	1663	13	-14	0	0	0	multi-exon	FALSE	canonical	3	745	junction_10	87.6810824649321	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTATGTTGTGGCTGTAAG	-16	True	NA	30	True	AATAAA	-27	NA	96797367	96881609	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556_96860736_96876029_96876121_96881176
H1_mix_00024915	chr14	+	5151	12	FSM	ENSG00000100749.9	ENST00000680335.1	5188	12	-6	43	0	-43	multi-exon	FALSE	canonical	1	3	junction_11	268.513846850424	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCACGTGGCCATCTTCAG	-10	True	NA	NA	False	NA	NA	NA	96797373	96935334	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556_96860736_96931330
H1_mix_00024917	chr14	+	3648	11	FSM	ENSG00000100749.9	ENST00000679506.1	3648	11	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_9	260.537060703463	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGTATGTTGTGGCTGT	NA	False	NA	27	True	AATAAA	-24	NA	96833466	96881606	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96855357_96856129_96856251_96856527_96856587_96860556_96860736_96876032_96876121_96881176
H1_mix_00024918	chr14	+	10918	2	FSM	ENSG00000100749.9	ENST00000555067.2	11646	2	728	0	728	0	multi-exon	FALSE	canonical	3	778	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTATGTTGTGGCTGTAAG	NA	False	NA	30	True	AATAAA	-27	NA	96865635	96881609	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_96876121_96881176
H1_mix_00024919	chr14	+	3524	11	FSM	ENSG00000090061.17	ENST00000389879.9	3524	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_10	5.31413210223457	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTAGTATGTATCTTGTT	-8	True	NA	NA	False	AAGAAA	-10	NA	99481408	99512440	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_99481480_99492625_99492875_99493513_99493596_99495497_99495630_99500765_99500872_99501355_99501414_99502206_99502377_99502718_99502985_99503610_99503645_99507075_99507148_99510156
H1_mix_00024924	chr14	+	4314	21	NIC	ENSG00000066629.18	novel	4460	22	NA	NA	-8	0	combination_of_known_splicesites	TRUE	canonical	3	20	junction_14	31.8532180477891	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTTCATTTCATTTTAAT	28	False	NA	13	True	AATGAA	-25	NA	99793426	99942060	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_99793544_99850852_99851036_99865513_99865647_99878484_99878620_99891198_99891228_99894628_99894759_99897144_99897295_99898232_99898303_99900928_99901040_99907637_99907734_99909344_99909480_99910241_99910342_99911421_99911577_99914178_99914305_99917781_99917850_99920788_99920878_99936028_99936127_99936246_99936335_99937816_99937913_99939196_99939328_99939986
H1_mix_00024926	chr14	+	3255	3	FSM	ENSG00000196405.13	ENST00000555848.1	1547	3	-1725	17	0	0	multi-exon	FALSE	canonical	3	231	junction_2	14	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGTTTACTGTCCGCACC	9934	False	NA	-5	True	NA	NA	NA	100138567	100144218	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_100141247_100141735_100141794_100143700
H1_mix_00024929	chr14	+	1957	7	FSM	ENSG00000176473.14	ENST00000402312.8	1923	7	-34	0	18	0	multi-exon	FALSE	canonical	3	28	junction_1	31.5700279801375	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTGCATTAGCAGCTT	-4	True	NA	32	True	AATAAA	-36	NA	100376450	100530303	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_100376496_100380909_100381747_100468020_100468169_100483993_100484125_100525869_100526041_100529067_100529209_100529819
H1_mix_00024930	chr14	+	2132	7	FSM	ENSG00000176473.14	ENST00000335290.10	2123	7	-9	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	37.9956137819442	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTGCATTAGCAGCTT	30	True	NA	32	True	AATAAA	-36	NA	100376484	100530303	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_100376705_100380909_100381747_100468020_100468169_100483993_100484125_100525869_100526041_100529067_100529209_100529819
H1_mix_00024931	chr14	+	4657	5	FSM	ENSG00000185559.16	ENST00000341267.9	4657	5	0	0	0	0	multi-exon	TRUE	canonical	3	262	junction_3	10.1087833095779	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTCTGCGTCTTTGAT	12	True	NA	5	True	AATAAA	-15	NA	100726891	100738224	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_100727136_100728395_100728460_100728935_100729067_100732041_100732184_100734148
H1_mix_00024932	chr14	+	3452	4	FSM	ENSG00000214548.18	ENST00000398461.5	3452	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	5.43650214343336	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTGATGGATGTGCTA	670	False	NA	NA	False	AATAAA	-19	NA	100832968	100861021	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_100835880_100836166_100836301_100845457_100845534_100860690
H1_mix_00024936	chr14	+	735	1	ISM	ENSG00000078304.19	ENST00000556260.6	2013	3	4242	203	3184	-203	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTTATGATTATTTAGA	524	False	NA	NA	False	NA	NA	NA	101766111	101766846	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_+_101766100_101766800
H1_mix_00024938	chr14	+	3845	13	FSM	ENSG00000078304.19	ENST00000350249.7	3845	13	0	0	0	0	multi-exon	TRUE	canonical	3	77	junction_12	98.0281634701647	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTCTGCGTTTGGCATC	-16	True	NA	NA	False	AATAAA	-22	NA	101809802	101927519	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_101810037_101856685_101856886_101882160_101882272_101883256_101883350_101883431_101883563_101890236_101890297_101892999_101893109_101894506_101894561_101901718_101901890_101906401_101906530_101909588_101909691_101912400_101912474_101925140
H1_mix_00024939	chr14	+	1526	12	FSM	ENSG00000078304.19	ENST00000445439.7	1526	12	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_6	27.9766726912982	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCCTTTTGTACAAGTAC	12	False	NA	20	True	AATAAA	-22	NA	101809894	101912625	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_101810037_101856685_101856886_101882160_101882272_101883256_101883350_101883431_101883563_101890236_101890297_101892999_101893109_101894506_101894561_101901718_101901890_101906401_101906530_101909588_101909691_101912400
H1_mix_00024940	chr14	+	4328	14	FSM	ENSG00000078304.19	ENST00000334743.9	4328	14	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_13	131.617654973	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGCTCATCATGAAACTAAA	12	False	NA	20	True	AATAAA	-17	NA	101809894	101927977	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_101810037_101856685_101856886_101882160_101882272_101883256_101883350_101883431_101883563_101890236_101890297_101892999_101893109_101894506_101894561_101901718_101901890_101906401_101906530_101909588_101909691_101912400_101912474_101917830_101917948_101925140
H1_mix_00024941	chr14	+	477	1	FSM	ENSG00000272444.1	ENST00000607122.1	648	1	168	3	168	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTTTTTGCTTTTCAG	4001	False	NA	60	True	AATAAA	-15	NA	101952583	101953060	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_101952600_101953100
H1_mix_00024947	chr14	+	2298	13	FSM	ENSG00000197102.14	ENST00000644239.2	2298	13	0	0	0	0	multi-exon	FALSE	canonical	3	508	junction_2	80.2727987690863	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATGAGCCGGCTCCGCC	NA	False	NA	10	True	AATAAA	-6	NA	102041774	102050784	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_102042125_102042227_102042289_102042383_102042508_102042634_102042749_102043874_102044046_102044273_102044492_102044594_102044699_102047816_102048029_102048515_102048670_102049439_102049583_102049713_102049883_102050070_102050199_102050434
H1_mix_00024950	chr14	+	6792	3	NIC	ENSG00000140153.18	novel	2384	3	NA	NA	3	96	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	44	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTTAATGTTTATAGAAC	454	False	NA	104	True	TTTAAA	-19	NA	102139877	102215101	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_102139988_102194937_102195121_102208602
H1_mix_00024955	chr14	+	2127	2	FSM	ENSG00000140153.18	ENST00000556511.2	2117	2	-10	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTAGTCATTTTATGAC	14	True	NA	-39	True	TTTAAA	-4	NA	102139913	102210470	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_102140173_102208602
H1_mix_00024957	chr14	+	3007	8	FSM	ENSG00000022976.16	ENST00000442396.7	2992	8	-15	0	-15	0	multi-exon	FALSE	canonical	3	34	junction_1	6.60859057498307	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTGTCTACATTTTTCT	-20	True	NA	6	True	TATAAA	-18	NA	102319730	102342367	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_102320054_102325984_102326888_102331621_102331847_102334553_102334647_102335688_102335839_102338815_102338954_102339093_102339224_102341322
H1_mix_00024963	chr14	+	7640	11	FSM	ENSG00000131323.16	ENST00000560371.5	7640	11	0	0	0	0	multi-exon	TRUE	canonical	1	8	junction_1	12.2572427568356	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGATCACACCGTCTC	31	False	NA	15	True	AATAAA	-19	NA	102777475	102911500	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_102777676_102870184_102870447_102871916_102871969_102875623_102875729_102876357_102876526_102886188_102886270_102889559_102889635_102891324_102891418_102897260_102897402_102903254_102903430_102905212
H1_mix_00024966	chr14	+	4097	13	NIC	ENSG00000185215.11	novel	4731	13	NA	NA	-320	0	intron_retention	TRUE	canonical	3	23	junction_1	18.7488888559651	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGAGTGATTTATTTT	1650	False	NA	17	True	TATAAA	-17	NA	103123121	103137439	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_103123484_103126309_103126693_103127004_103127630_103129739_103129855_103130001_103130125_103130314_103130416_103131051_103131151_103131638_103131763_103132749_103132873_103133361_103133518_103133681_103133804_103135218_103135352_103135808
H1_mix_00024972	chr14	+	5710	12	FSM	ENSG00000100664.11	ENST00000216554.8	5710	12	0	0	0	0	multi-exon	FALSE	canonical	3	1777	junction_1	242.614274003846	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGAGTCACTTGTGTTCAA	25	True	NA	9	True	AATAAA	-22	NA	103334236	103345025	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103334261_103334388_103334598_103335652_103335933_103336035_103336118_103336676_103336850_103337115_103337228_103338326_103338473_103338734_103338894_103339171_103339334_103339638_103339804_103340426_103340562_103340962
H1_mix_00024974	chr14	+	4384	10	FSM	ENSG00000100664.11	ENST00000558506.1	4384	10	0	0	0	0	multi-exon	FALSE	canonical	3	2481	junction_8	93.1414694608869	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGGAATCTGCCCTGTT	63	False	NA	43	True	ATTAAA	-34	NA	103334948	103343228	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103335933_103336035_103336118_103336676_103336850_103337115_103337228_103338326_103338473_103338734_103338894_103339171_103339334_103339638_103339804_103340426_103340562_103340962
H1_mix_00024982	chr14	+	3259	17	FSM	ENSG00000075413.19	ENST00000677360.1	3247	17	-12	0	0	0	multi-exon	TRUE	canonical	3	21	junction_15	238.883069918632	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATAATTAAAAATTCACT	5	True	NA	-23	True	NA	NA	NA	103385410	103503797	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103386081_103428386_103428441_103448918_103448968_103451917_103451984_103457141_103457213_103462404_103462462_103465556_103465794_103465971_103466092_103466342_103466443_103467078_103467192_103468032_103468187_103474992_103475211_103480386_103480491_103491776_103492035_103498501_103498529_103500155_103500201_103502881
H1_mix_00024983	chr14	+	3283	16	FSM	ENSG00000075413.19	ENST00000303622.13	3283	16	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_2	76.1167524267818	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCATTGTCTCCTAATG	30	False	NA	11	True	ATTAAA	-23	NA	103385540	103503831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103386081_103405075_103405268_103428386_103428441_103448918_103448968_103451917_103451984_103457141_103457213_103462404_103462462_103465556_103465794_103465971_103466092_103466342_103466443_103467078_103467192_103468032_103468187_103474992_103475211_103480386_103480491_103491776_103492035_103502881
H1_mix_00024984	chr14	+	2911	16	FSM	ENSG00000075413.19	ENST00000216288.11	2911	16	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_11	115.772881107797	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATCTTGCATTGTCTCC	349	False	NA	6	True	ATTAAA	-18	NA	103385859	103503826	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103386081_103405075_103405268_103428386_103428441_103448918_103448968_103451917_103451984_103457141_103457213_103462404_103462462_103465556_103465794_103465971_103466092_103466342_103466443_103467078_103467192_103468080_103468187_103474992_103475211_103480386_103480491_103491776_103492035_103502881
H1_mix_00024987	chr14	+	2282	2	FSM	ENSG00000075413.19	ENST00000555235.1	2282	2	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCTTGCATTGTCTCCT	NA	False	NA	7	True	ATTAAA	-19	NA	103498864	103503827	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103500201_103502881
H1_mix_00024989	chr14	+	580	3	FSM	ENSG00000256053.9	ENST00000440963.2	575	3	-5	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	218.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAATAAAGCCCAAGCACT	-15	True	NA	0	True	NA	NA	NA	103562959	103590504	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103563125_103587273_103587365_103590180
H1_mix_00024996	chr14	+	2543	15	NNC	ENSG00000126214.22	novel	3250	15	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	2	70	junction_12	118.777982739536	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACTCCGACTGACCTGT	-11	True	NA	6	True	NA	NA	NA	103629202	103686210	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679407_103679546_103684985_103685037_103685637
H1_mix_00024998	chr14	+	3135	14	FSM	ENSG00000126214.22	ENST00000553286.5	3135	14	0	0	0	0	multi-exon	FALSE	canonical	2	78	junction_13	86.4785091475258	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCCGACTGACCTGTG	23	True	NA	7	True	AATAAA	-1	NA	103629236	103686211	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679546_103684985
H1_mix_00024999	chr14	+	2271	16	FSM	ENSG00000126214.22	ENST00000347839.10	2271	16	0	0	0	0	multi-exon	FALSE	canonical	2	57	junction_14	128.020415038644	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAACCTTGGAGGTGCCTT	23	True	NA	NA	False	NA	NA	NA	103629236	103693743	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679519_103687080_103687212_103692358_103692426_103693552
H1_mix_00025000	chr14	+	2399	16	FSM	ENSG00000126214.22	ENST00000554280.5	2426	16	-4	31	0	0	multi-exon	FALSE	canonical	2	50	junction_14	111.647660074002	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTTTAAATTAAAAGTT	23	True	NA	-11	True	NA	NA	NA	103629236	103701513	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679519_103687080_103687212_103700654_103700728_103701200
H1_mix_00025005	chr14	+	811	1	FSM	ENSG00000269958.1	ENST00000602422.1	811	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGCAGAAAGGCTGTTT	4866	False	NA	31	True	AATAAA	-32	NA	103696352	103697163	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103696400_103697200
H1_mix_00025008	chr14	+	1385	7	FSM	ENSG00000100711.14	ENST00000311141.7	1383	7	-2	0	0	0	multi-exon	TRUE	canonical	3	381	junction_5	128.859958438954	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGACAAGGCCTCGCCTTCC	0	True	NA	20	True	ATTAAA	-17	NA	103715807	103733664	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103715980_103726791_103726843_103727745_103727915_103728907_103728984_103729090_103729183_103732619_103732763_103732982
H1_mix_00025021	chr14	+	4163	2	FSM	ENSG00000184990.13	ENST00000556431.1	4142	2	-21	0	0	0	multi-exon	FALSE	canonical	3	1460	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGAGGACTCTTGTCTGT	-8	True	NA	27	True	AATAAA	-16	NA	104753180	104759653	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_104753320_104755629
H1_mix_00025025	chr14	+	6729	19	FSM	ENSG00000099814.17	ENST00000414716.8	6727	19	-2	0	-2	0	multi-exon	TRUE	canonical	2	3	junction_12	35.1728097144638	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGCTGGAGCCTGTCACC	-24	True	NA	34	True	AATAAA	-22	NA	104865265	104896747	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_104865514_104868423_104868556_104876255_104876346_104877884_104877964_104878442_104878502_104880286_104880426_104882727_104882833_104883034_104883509_104883830_104884550_104885368_104885543_104886039_104886131_104886274_104887979_104889619_104889759_104892975_104893136_104893522_104893667_104893760_104893850_104894284_104894379_104894536_104894589_104894710
H1_mix_00025026	chr14	+	2395	5	FSM	ENSG00000140104.14	ENST00000547315.6	2379	5	-16	0	-3	0	multi-exon	FALSE	canonical	3	21	junction_2	2.54950975679639	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTTGTCACTGGTTCAT	-15	True	NA	17	True	AATAAA	-14	NA	104985771	104995516	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_104986855_104988942_104989089_104991490_104991621_104992947_104993065_104994597
H1_mix_00025027	chr14	+	1910	4	FSM	ENSG00000140104.14	ENST00000550614.5	1912	4	0	2	0	0	multi-exon	FALSE	canonical	3	13	junction_1	6.37704215656966	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTTGTCACTGGTTCAT	3177	False	NA	17	True	AATAAA	-14	NA	104988963	104995516	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_104989708_104991490_104991621_104992947_104993065_104994597
H1_mix_00025031	chr14	+	3457	24	FSM	ENSG00000179364.15	ENST00000325438.12	3708	24	251	0	-82	0	multi-exon	FALSE	canonical	3	248	junction_20	31.8114720541711	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGATATTTTTAATGCTTT	379	False	NA	22	True	AATAAA	-30	NA	105314665	105395206	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_105315038_105348492_105348581_105352377_105352468_105355051_105355178_105367212_105367376_105368073_105368148_105368458_105368540_105369840_105369901_105376767_105376926_105379738_105379830_105380079_105380155_105380956_105381100_105381913_105382047_105382476_105382582_105382806_105382914_105383358_105383514_105384352_105384464_105384878_105384988_105389960_105390004_105391206_105391250_105391630_105391767_105392618_105392846_105393221_105393336_105394553
H1_mix_00025033	chr14	+	1876	9	FSM	ENSG00000179364.15	ENST00000551743.5	1876	9	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_5	40.4874594782137	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACATGTTGCTCTTCTGA	NA	False	NA	20	True	AATACA	-18	NA	105383118	105395251	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_105383514_105384352_105384464_105384878_105384988_105389960_105390004_105391206_105391250_105391630_105391767_105392618_105392846_105393221_105393336_105394553
H1_mix_00025036	chr14	+	2878	21	FSM	ENSG00000182979.18	ENST00000331320.12	2871	21	-7	0	0	0	multi-exon	FALSE	canonical	3	138	junction_17	168.294050696987	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGTCCTTCCCTGTGTCTT	-31	True	NA	27	True	ATTAAA	-44	NA	105419819	105470729	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_105420064_105438671_105438740_105445417_105445512_105449358_105449410_105450057_105450185_105450260_105450325_105454192_105454311_105458269_105458373_105460357_105460458_105460764_105460954_105463183_105463259_105463492_105463552_105464031_105464148_105464415_105464568_105464673_105464864_105465093_105465184_105466425_105466579_105466706_105466743_105469466_105469499_105469840_105469993_105470064
H1_mix_00025037	chr14	+	2770	20	FSM	ENSG00000182979.18	ENST00000406191.5	2770	20	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_4	110.474022717066	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGTCCTTCCCTGTGTCTT	41	False	NA	27	True	ATTAAA	-44	NA	105419891	105470729	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_105420064_105438671_105438740_105445417_105445512_105449358_105449410_105450057_105450185_105450260_105450325_105454192_105454311_105458269_105458373_105460357_105460458_105460764_105460954_105463183_105463259_105463492_105463552_105464031_105464148_105464415_105464568_105464673_105464864_105465093_105465184_105466425_105466579_105469466_105469499_105469840_105469993_105470064
H1_mix_00025038	chr14	+	2709	20	FSM	ENSG00000182979.18	ENST00000405646.5	2709	20	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_16	167.420018527887	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGTCCTTCCCTGTGTCTT	87	False	NA	27	True	ATTAAA	-44	NA	105419937	105470729	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_105420064_105438671_105438740_105445417_105445512_105450057_105450185_105450260_105450325_105454192_105454311_105458269_105458373_105460357_105460458_105460764_105460954_105463183_105463259_105463492_105463552_105464031_105464148_105464415_105464568_105464673_105464864_105465093_105465184_105466425_105466579_105466706_105466743_105469466_105469499_105469840_105469993_105470064
H1_mix_00025040	chr14	+	1004	2	FSM	ENSG00000182979.18	ENST00000481635.1	700	2	0	-304	0	0	multi-exon	FALSE	canonical	3	698	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATTTTATTTTTATTA	218	False	NA	NA	False	NA	NA	NA	105469466	105470542	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_105469993_105470064
H1_mix_00025043	chr14	+	1387	7	FSM	ENSG00000182809.11	ENST00000547643.5	1373	7	-14	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	4.15331193145904	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGATTGCAGGATTGTCTC	-3	True	NA	13	True	AATAAA	-7	NA	105474817	105480152	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_105474906_105478265_105478361_105478449_105478508_105478730_105478872_105478978_105479048_105479124_105479494_105479585
H1_mix_00025047	chr14	+	793	2	FSM	ENSG00000185347.18	ENST00000546492.1	965	2	172	0	172	0	multi-exon	FALSE	canonical	3	41	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCCCTCCCCCTGCCAC	6521	False	NA	24	True	AATAAA	-20	NA	105497797	105499229	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_105497978_105498616
H1_mix_00025048	chr14	-	2285	1	FSM	ENSG00000257175.2	ENST00000548656.2	2254	1	-27	-4	-27	4	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCGCTGTGTGTGAGC	NA	False	NA	NA	False	NA	NA	NA	18637235	18634950	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_18635000_18637200
H1_mix_00025049	chr14	-	306	1	FSM	ENSG00000278594.1	ENST00000619332.1	1049	1	828	-85	828	85	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTTCCCTCCCCCCTCA	NA	False	NA	NA	False	NA	NA	NA	19132062	19131756	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_19131800_19132100
H1_mix_00025050	chr14	-	3895	1	FSM	ENSG00000258768.2	ENST00000556738.1	3829	1	-53	-13	-53	13	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATTCTCTGAACGCATA	NA	False	NA	NA	False	AATAAA	-34	NA	20264361	20260466	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_20260500_20264400
H1_mix_00025051	chr14	-	4737	10	FSM	ENSG00000136319.12	ENST00000258821.8	4737	10	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_5	13.3175832901979	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGCTTTTTCATTTTCTT	-1	True	NA	1	True	TATAAA	-34	NA	20305951	20286226	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_20289747_20291982_20292128_20295311_20295527_20295707_20295855_20296389_20296447_20298796_20298889_20299297_20299449_20300606_20300819_20301832_20301966_20305886
H1_mix_00025052	chr14	-	5014	9	FSM	ENSG00000136319.12	ENST00000554157.5	5014	9	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_4	14.0662495001333	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCACGTAGTTTGGCCTGC	2	True	NA	NA	False	ATTAAA	-23	NA	20305948	20289130	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_20289747_20291982_20295527_20295707_20295855_20296389_20296447_20298796_20298889_20299297_20299449_20300606_20300819_20301832_20301966_20305886
H1_mix_00025054	chr14	-	1613	7	FSM	ENSG00000100814.18	ENST00000398160.6	1613	7	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_6	183.496972424312	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTTCTATGTTCATCT	301	False	NA	-10	True	AATAAA	-22	NA	20333010	20311367	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_20311753_20313467_20313802_20316226_20316561_20325538_20325654_20326715_20326794_20329173_20329374_20332843
H1_mix_00025055	chr14	-	1686	8	FSM	ENSG00000100814.18	ENST00000437553.6	1686	8	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	224.943711780053	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTTCTATGTTCATCT	-1	True	NA	-10	True	AATAAA	-22	NA	20333312	20311367	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_20311753_20313467_20313802_20316226_20316561_20317793_20317975_20325538_20325654_20326715_20326794_20329173_20329374_20333253
H1_mix_00025056	chr14	-	1305	6	FSM	ENSG00000100814.18	ENST00000353689.8	1305	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	196.419347315889	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTTCTATGTTCATCT	-1	True	NA	-10	True	AATAAA	-22	NA	20333312	20311367	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_20311753_20313467_20313802_20316226_20316561_20325538_20325654_20326715_20326794_20333253
H1_mix_00025057	chr14	-	1472	7	FSM	ENSG00000100814.18	ENST00000358932.9	1470	7	0	-2	0	0	multi-exon	FALSE	canonical	3	201	junction_6	119.686627861632	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTTCTATGTTCATCT	3	True	NA	-10	True	AATAAA	-22	NA	20333279	20311367	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_20311753_20313467_20313802_20316226_20316561_20325538_20325654_20326715_20326794_20329173_20329374_20333253
H1_mix_00025061	chr14	-	347	1	FSM	ENSG00000277209.1	ENST00000516869.1	333	1	10	-24	10	24	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAACAAAACGAAACCG	9	True	NA	NA	False	NA	NA	NA	20343397	20343050	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_20343000_20343400
H1_mix_00025062	chr14	-	431	3	FSM	ENSG00000129566.13	ENST00000557627.1	1081	3	333	317	333	-317	multi-exon	FALSE	canonical	2	3	junction_1	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAGTGACCTTGACCATC	9943	False	NA	NA	False	NA	NA	NA	20403524	20400983	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_20401142_20401456_20401582_20403376
H1_mix_00025064	chr14	-	1664	8	NNC	ENSG00000165782.11	novel	1696	7	NA	NA	0	36808	intron_retention	FALSE	non_canonical	0	0	junction_1	136.425504827165	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	75	False	NA	NA	False	NA	NA	NA	20461401	20420872	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_20420907_20457859_20458703_20459205_20459297_20459387_20459441_20459627_20459734_20460191_20460299_20460654_20460846_20461162
H1_mix_00025065	chr14	-	1988	11	FSM	ENSG00000092094.11	ENST00000206542.9	1976	11	0	-12	0	12	multi-exon	TRUE	canonical	3	195	junction_6	18.0177690072883	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTATACTTTCTCCTACATG	8	True	NA	NA	False	NA	NA	NA	20454812	20446388	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_20447280_20447421_20447521_20447614_20447691_20447903_20447995_20448105_20448172_20448732_20448812_20448963_20449014_20449170_20449267_20451973_20452150_20452328_20452449_20454568
H1_mix_00025066	chr14	-	987	7	FSM	ENSG00000092094.11	ENST00000554249.5	987	7	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_6	21.4741446602394	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTCCAAGCAAGGCTTGG	6599	False	NA	-89	True	NA	NA	NA	20449398	20447138	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_20447280_20447421_20447521_20447614_20447691_20447903_20447995_20448105_20448172_20448732_20448812_20448963
H1_mix_00025068	chr14	-	3453	2	FSM	ENSG00000165782.11	ENST00000557041.1	3453	2	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTTTTCAGTTGTTAACT	75	False	NA	-16	True	AATAAA	-17	NA	20461401	20457857	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_20459297_20459387
H1_mix_00025069	chr14	-	1696	7	FSM	ENSG00000165782.11	ENST00000398020.6	1696	7	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_6	77.454646227468	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTTTTCAGTTGTTAACT	11	False	NA	-16	True	AATAAA	-17	NA	20461465	20457857	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_20458703_20459205_20459297_20459387_20459441_20459627_20459734_20460191_20460299_20460654_20460846_20461162
H1_mix_00025070	chr14	-	1821	7	FSM	ENSG00000165782.11	ENST00000250489.9	1821	7	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_6	56.1735900777422	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCTCAAATAAAAAATCTTG	-3	True	NA	NA	False	TTTAAA	-11	NA	20461434	20457680	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_20458703_20459205_20459297_20459387_20459441_20459627_20459734_20460191_20460299_20460654_20460846_20461183
H1_mix_00025072	chr14	-	1728	2	FSM	ENSG00000129538.14	ENST00000397967.5	914	2	-947	133	-936	-5	multi-exon	FALSE	canonical	3	17	junction_1	0	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTTCTGAAGCGGTTC	NA	False	NA	-11	True	AATAAA	-16	NA	20803791	20801360	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_20802094_20802796
H1_mix_00025073	chr14	-	825	2	NNC	ENSG00000129538.14	novel	914	2	NA	NA	-25228	-6	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	0	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGATTTCTGAAGCGGTT	0	True	NA	-12	True	AATAAA	-15	NA	20828083	20801361	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_20802094_20827990
H1_mix_00025074	chr14	-	2125	17	FSM	ENSG00000165795.25	ENST00000298687.9	2122	17	0	-3	0	3	multi-exon	FALSE	canonical	3	26	junction_16	51.3516902715967	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGTCTAGGTGTGCCT	9029	False	NA	1	True	AATAAA	-29	NA	21025776	21016759	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21024029_21024097_21025676
H1_mix_00025075	chr14	-	2058	16	FSM	ENSG00000165795.25	ENST00000397858.5	2054	16	0	-4	0	3	multi-exon	FALSE	canonical	3	20	junction_15	52.9815900940024	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGTCTAGGTGTGCCT	9029	False	NA	1	True	AATAAA	-29	NA	21025776	21016759	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21025676
H1_mix_00025076	chr14	-	2146	13	FSM	ENSG00000165795.25	ENST00000554104.5	2146	13	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_4	21.3033643665345	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCGTTATTATTCTTTGT	5	True	NA	-11	True	AATAAA	-17	NA	21022820	21016771	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391
H1_mix_00025077	chr14	-	2088	17	FSM	ENSG00000165795.25	ENST00000397853.7	2079	17	0	-9	0	0	multi-exon	FALSE	canonical	3	43	junction_16	48.0245705342588	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTTTGTCTAGGTGTG	9711	False	NA	-2	True	AATAAA	-26	NA	21025094	21016762	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21024029_21024097_21025028
H1_mix_00025079	chr14	-	2109	15	FSM	ENSG00000165795.25	ENST00000397844.6	2096	15	0	-13	0	0	multi-exon	FALSE	canonical	3	15	junction_3	73.7378146280621	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGAGGGTGCCCTCCC	9160	False	NA	-77	True	GGGGCT	-18	NA	21025645	21016837	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21023240_21023322_21024029_21024097_21025393
H1_mix_00025081	chr14	-	3055	5	FSM	ENSG00000165804.16	ENST00000360947.8	3055	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_4	82.0620953912341	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGTCTGTCTGCCTA	-31	True	NA	-31	True	AATAAA	-21	NA	21098655	21090076	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21091141_21091410_21091543_21091864_21093291_21093585_21093675_21098311
H1_mix_00025082	chr14	-	3162	5	NIC	ENSG00000165804.16	novel	3055	5	NA	NA	26	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_4	96.2782426096364	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGTCTGTCTGCCTA	1084	False	NA	-31	True	AATAAA	-21	NA	21103553	21090076	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_21091141_21091410_21091543_21091864_21093291_21093585_21093675_21103102
H1_mix_00025084	chr14	-	1830	3	FSM	ENSG00000165804.16	ENST00000554923.1	567	3	-9	-1254	-9	945	multi-exon	FALSE	canonical	3	14	junction_1	6.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCCATCATTTGAGAACA	9667	False	NA	36	True	NA	NA	NA	21094544	21091717	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21093305_21093585_21093675_21094390
H1_mix_00025087	chr14	-	7853	1	FSM	ENSG00000258441.1	ENST00000555379.1	5425	1	-1985	-443	-588	443	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATGATGCTCTTGAATTC	8630	False	NA	NA	False	NA	NA	NA	21207488	21199635	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21199600_21207500
H1_mix_00025088	chr14	-	3176	9	FSM	ENSG00000092199.19	ENST00000553300.6	3165	9	0	-11	0	0	multi-exon	FALSE	canonical	3	4459	junction_8	965.132471477361	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGTAACTTTTTTTATT	-12	True	NA	0	True	ATTAAA	-31	NA	21269442	21209135	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21211307_21211405_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21263310_21263337_21269297
H1_mix_00025089	chr14	-	3301	7	FSM	ENSG00000092199.19	ENST00000336053.10	3301	7	0	0	0	0	multi-exon	FALSE	canonical	3	1921	junction_6	1737.71091445678	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGTAACTTTTTTTATT	NA	False	NA	0	True	ATTAAA	-31	NA	21269494	21209135	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21269297
H1_mix_00025090	chr14	-	1721	8	NIC	ENSG00000092199.19	novel	1924	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	1921	junction_7	1694.30581775594	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGTATTTTATTATTG	45	False	NA	-13	True	ATTAAA	-37	NA	21269411	21210533	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_21211307_21211405_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21269297
H1_mix_00025091	chr14	-	1800	9	FSM	ENSG00000092199.19	ENST00000554455.5	1784	9	0	-16	0	0	multi-exon	FALSE	canonical	3	1374	junction_5	1828.31643869435	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGTATTTTATTATTG	5	True	NA	-13	True	ATTAAA	-37	NA	21269425	21210533	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21211307_21211405_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230957_21231073_21233952_21234230_21263310_21263337_21269297
H1_mix_00025092	chr14	-	1924	10	FSM	ENSG00000092199.19	ENST00000554969.5	1924	10	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_8	2639.84309765693	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGTATTTTATTATTG	5	True	NA	-13	True	ATTAAA	-37	NA	21269425	21210533	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21211307_21211405_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21263310_21263337_21263666_21263830_21269297
H1_mix_00025093	chr14	-	1717	8	NIC	ENSG00000092199.19	novel	1658	9	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	387	junction_2	2518.09601703756	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTGTATTTTATTATT	45	False	NA	-14	True	ATTAAA	-36	NA	21269411	21210534	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_21211307_21211405_21211564_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21269297
H1_mix_00025094	chr14	-	1601	7	ISM	ENSG00000092199.19	ENST00000556897.5	1252	8	28432	-410	-2823	0	3prime_fragment	FALSE	canonical	3	5820	junction_5	571.958526079956	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAACCCTGGTTTT	NA	False	NA	-35	True	AATAAA	-30	NA	21234245	21210555	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_-_21211307_21211405_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952
H1_mix_00025095	chr14	-	4501	8	FSM	ENSG00000092199.19	ENST00000430246.6	4501	8	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_7	2287.77931717236	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAACCCTGGTTTT	3940	False	NA	-35	True	AATAAA	-30	NA	21265516	21210555	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21211307_21211405_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21262600
H1_mix_00025096	chr14	-	1790	8	FSM	ENSG00000092199.19	ENST00000553753.5	1790	8	0	0	0	0	multi-exon	FALSE	canonical	3	4459	junction_7	927.078734300295	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCTTATTAAACCAGGAAT	53	False	NA	-61	True	AATAAA	-4	NA	21269403	21210581	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21263310_21263337_21269297
H1_mix_00025097	chr14	-	1658	9	FSM	ENSG00000092199.19	ENST00000555914.5	1658	9	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_2	2080.07998644283	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGGACCTTTTTTCCTC	52	False	NA	-92	True	NA	NA	NA	21269404	21210612	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21211307_21211405_21211564_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21263310_21263337_21269297
H1_mix_00025098	chr14	-	1714	9	FSM	ENSG00000092199.19	ENST00000555309.5	1714	9	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_2	2427.08718168507	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGGACCTTTTTTCCTC	9	True	NA	-92	True	NA	NA	NA	21269421	21210612	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21211307_21211405_21211564_21211809_21211924_21212959_21213118_21230318_21230367_21230957_21231073_21233952_21234230_21263310_21263337_21269297
H1_mix_00025099	chr14	-	1375	8	FSM	ENSG00000092199.19	ENST00000557201.5	1371	8	0	-4	0	0	multi-exon	FALSE	canonical	3	1374	junction_5	2312.16265051769	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTCTCCAAAATAATCTCT	5	True	NA	-5	True	AATAAA	-23	NA	21269425	21210932	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21211307_21211405_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230957_21231073_21233952_21234230_21269297
H1_mix_00025100	chr14	-	1039	9	FSM	ENSG00000092199.19	ENST00000554383.5	1039	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_7	2717.1441090555	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGATGACCAGGTGAAAAC	-12	True	NA	NA	False	AATGAA	-7	NA	21269442	21211417	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21263310_21263337_21268622_21268669_21269297
H1_mix_00025102	chr14	-	2327	6	FSM	ENSG00000092201.10	ENST00000557394.5	2324	6	0	-3	0	0	multi-exon	FALSE	canonical	3	1881	junction_4	82.9057295969344	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCTGTGACCGTTCATT	NA	False	NA	-10	True	AATAAA	-32	NA	21358402	21351475	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21352819_21353487_21353566_21353702_21353833_21354410_21354541_21357196_21357367_21357926
H1_mix_00025103	chr14	-	4433	26	FSM	ENSG00000092201.10	ENST00000216297.7	4433	26	0	0	0	0	multi-exon	FALSE	canonical	3	1447	junction_10	155.60690987228	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCTGTGACCGTTCATT	-11	True	NA	-10	True	AATAAA	-32	NA	21384019	21351475	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21352819_21353487_21353566_21353702_21353833_21354410_21354541_21357196_21357367_21357926_21358003_21358314_21358428_21359483_21359610_21360414_21360534_21360845_21360973_21361077_21361214_21362196_21362325_21362793_21362948_21363033_21363150_21363232_21363329_21363437_21363504_21364826_21364940_21365069_21365144_21366438_21366530_21368268_21368442_21369203_21369356_21369749_21369897_21370335_21370489_21371873_21372045_21373337_21373431_21383861
H1_mix_00025105	chr14	-	888	3	FSM	ENSG00000092201.10	ENST00000555752.1	888	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	1007	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCGTTGTCACTGTTGTCT	-5	True	NA	NA	False	NA	NA	NA	21384013	21372074	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21372718_21373337_21373431_21383861
H1_mix_00025106	chr14	-	2414	1	FSM	ENSG00000100888.15	ENST00000557727.1	1146	1	-1267	-1	-1267	1	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTCTTCCTTTGTTCTA	9788	False	NA	-29	True	AATAAA	-17	NA	21387611	21385197	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21385200_21387600
H1_mix_00025108	chr14	-	7433	38	FSM	ENSG00000100888.15	ENST00000430710.8	7422	38	3	-14	2	14	multi-exon	FALSE	canonical	3	17	junction_37	25.6405449562555	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTTGCTCAAACCCAGT	6	True	NA	-11	True	AATAAA	-35	NA	21437242	21385179	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21386177_21390946_21391064_21391462_21391643_21391832_21391947_21392506_21392810_21393105_21393255_21393475_21394196_21394276_21394486_21394911_21395120_21395297_21395353_21395816_21395893_21397822_21397953_21399601_21399706_21399980_21400071_21400150_21400308_21400412_21400613_21400874_21401072_21401402_21401514_21401956_21402137_21402335_21402504_21403016_21403213_21403452_21403664_21405208_21405465_21405720_21405865_21406855_21407033_21408311_21408556_21408703_21408826_21409850_21409989_21412912_21412997_21414300_21414419_21414937_21414994_21415573_21415643_21415724_21415908_21426127_21426243_21427868_21428255_21428963_21429336_21431810_21431859_21437193
H1_mix_00025109	chr14	-	8522	38	FSM	ENSG00000100888.15	ENST00000646647.2	8467	38	-54	-1	-51	1	multi-exon	FALSE	canonical	3	34	junction_36	23.7391165328845	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTCTTCCTTTGTTCTA	3753	False	NA	-29	True	AATAAA	-17	NA	21456177	21385197	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21386177_21390946_21391064_21391462_21391643_21391832_21391947_21392506_21392810_21393105_21393255_21393475_21394196_21394276_21394486_21394911_21395120_21395297_21395353_21395816_21395893_21397822_21397953_21399601_21399706_21399980_21400071_21400150_21400308_21400412_21400613_21400874_21401072_21401402_21401514_21401956_21402137_21402335_21402504_21403016_21403213_21403452_21403664_21405208_21405465_21405720_21405865_21406855_21407033_21408311_21408556_21408703_21408826_21409850_21409989_21412912_21412997_21414300_21414419_21414937_21414994_21415573_21415643_21415724_21415908_21426127_21426243_21427868_21428255_21428963_21429336_21430800_21431859_21456031
H1_mix_00025113	chr14	-	2914	8	FSM	ENSG00000129472.15	ENST00000397762.6	2914	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	6.88091118788131	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATACTCCATGTGTCATT	-24	True	NA	-5	True	ATTAAA	-22	NA	21476959	21459019	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21461304_21462349_21462419_21463655_21463768_21468356_21468450_21468669_21468753_21474866_21474935_21476527_21476600_21476826
H1_mix_00025114	chr14	-	630	7	FSM	ENSG00000129472.15	ENST00000461909.1	630	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	7.28964257620968	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCAGCGGAACTCTCGTG	-11	True	NA	NA	False	NA	NA	NA	21476673	21461244	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21461304_21462349_21462419_21463655_21463768_21468356_21468450_21468669_21468753_21474866_21474935_21476527
H1_mix_00025116	chr14	-	1985	11	FSM	ENSG00000165819.12	ENST00000298717.9	1980	11	0	-5	0	0	multi-exon	FALSE	canonical	3	311	junction_3	75.923382432555	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCCATTCTGGCTCTGCT	-9	True	NA	-20	True	AATAAA	-26	NA	21511340	21498132	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21498370_21499024_21499138_21499305_21499372_21499491_21499601_21499763_21499803_21500494_21500683_21500912_21501130_21501727_21501904_21503172_21503578_21503663_21503882_21511123
H1_mix_00025117	chr14	-	2135	9	FSM	ENSG00000165819.12	ENST00000543235.5	2124	9	0	-11	0	0	multi-exon	FALSE	canonical	3	27	junction_6	153.692824734924	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACATTTGTATTGTAGTT	21	True	NA	-49	True	TTTAAA	-1	NA	21511310	21498161	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21498370_21499024_21499601_21499763_21499803_21500494_21500683_21500912_21501130_21501727_21501825_21503172_21503578_21503663_21503882_21511123
H1_mix_00025118	chr14	-	2030	10	FSM	ENSG00000165819.12	ENST00000537163.5	2030	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	147.916225873104	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACATTTGTATTGTAGTT	-9	True	NA	-49	True	TTTAAA	-1	NA	21511340	21498161	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21498370_21499024_21499601_21499763_21499803_21500494_21500683_21500912_21501130_21501727_21501904_21503172_21503292_21503505_21503578_21503663_21503882_21511123
H1_mix_00025120	chr14	-	753	2	FSM	ENSG00000165819.12	ENST00000367606.7	802	2	0	49	0	-49	multi-exon	FALSE	canonical	3	10	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCAGATTATTCCATTCGT	-9	True	NA	NA	False	GATAAA	-2	NA	21511340	21507699	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21508236_21511123
H1_mix_00025121	chr14	-	4865	2	FSM	ENSG00000165821.12	ENST00000537235.2	4861	2	0	-4	0	4	multi-exon	FALSE	canonical	3	331	junction_1	0	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTTTCTCCTTATTTC	6	True	NA	1	True	ATTAAA	-20	NA	21526346	21521075	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21525655_21526060
H1_mix_00025122	chr14	-	4947	2	FSM	ENSG00000165821.12	ENST00000614342.1	4942	2	0	-5	0	4	multi-exon	FALSE	canonical	3	632	junction_1	0	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTTTCTCCTTATTTC	3	True	NA	1	True	ATTAAA	-20	NA	21537216	21521075	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21525655_21536848
H1_mix_00025124	chr14	-	339	3	FSM	ENSG00000129562.11	ENST00000489532.6	339	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	0.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATATGCCTCTGGCTCTGTT	141	False	NA	-12	True	ATTAAA	-20	NA	22575089	22564906	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22565138_22567087_22567165_22575058
H1_mix_00025125	chr14	-	684	3	FSM	ENSG00000129562.11	ENST00000250498.9	684	3	0	0	0	0	multi-exon	FALSE	canonical	3	1746	junction_2	46	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATATGCCTCTGGCTCTGTT	-27	True	NA	-12	True	ATTAAA	-20	NA	22589224	22564906	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22565138_22575058_22575234_22588946
H1_mix_00025126	chr14	-	249	1	FSM	ENSG00000258458.8	ENST00000672139.1	1134	1	294	591	294	-20	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAAATTATTGTA	1900	False	NA	NA	False	AAGAAA	-34	NA	22764653	22764404	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22764400_22764700
H1_mix_00025127	chr14	-	2249	10	FSM	ENSG00000155465.20	ENST00000674313.1	2082	10	-166	-1	-78	1	multi-exon	FALSE	canonical	3	15	junction_8	5.22812904711937	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTGGCTTCATTTTAT	7803	False	NA	-2	True	AATAAA	-18	NA	22815601	22773220	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22773717_22773932_22774117_22774353_22774504_22775443_22775541_22775832_22775937_22776194_22776319_22778792_22778938_22779925_22780052_22812899_22813441_22815319
H1_mix_00025128	chr14	-	2240	11	FSM	ENSG00000155465.20	ENST00000555702.5	2272	11	33	-1	18	1	multi-exon	FALSE	canonical	1	2	junction_10	7.93977329651168	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTGGCTTCATTTTAT	1	True	NA	-2	True	AATAAA	-18	NA	22819778	22773220	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22773717_22773932_22774117_22774353_22774504_22775443_22775541_22775832_22775937_22776194_22776319_22778792_22778938_22779925_22780052_22812899_22813441_22815319_22815452_22819637
H1_mix_00025129	chr14	-	10003	14	FSM	ENSG00000100461.18	ENST00000359890.8	10007	14	0	4	0	-4	multi-exon	FALSE	canonical	3	66	junction_11	59.8731400496774	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTTCCTGGGAGTGAGG	1	True	NA	NA	False	AATAAA	-15	NA	22919149	22893207	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22901734_22901813_22901884_22901979_22902100_22902186_22902383_22904260_22904327_22904874_22905013_22905093_22905247_22905335_22905454_22905605_22905660_22906194_22906369_22908332_22908381_22909482_22909596_22911327_22911404_22918998
H1_mix_00025130	chr14	-	2430	13	FSM	ENSG00000100461.18	ENST00000399922.6	2430	13	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_10	32.9363864981506	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAAGCCTCCTCCTTGTGG	7245	False	NA	-32	True	CATAAA	-41	NA	22919182	22900765	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22901734_22901813_22901884_22901979_22902100_22902186_22902383_22904260_22904327_22904874_22905013_22905093_22905247_22905335_22905454_22905605_22905660_22906194_22906369_22909482_22909596_22911327_22911404_22918998
H1_mix_00025132	chr14	-	2308	17	FSM	ENSG00000100462.16	ENST00000324366.13	2304	17	0	-4	0	0	multi-exon	FALSE	canonical	3	713	junction_14	62.9522388402509	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGCCCCCTGCCACTA	5	True	NA	-1	True	AATAAA	-24	NA	22929376	22920524	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22921057_22922175_22922241_22922442_22922560_22922741_22922836_22923050_22923161_22924007_22924184_22924269_22924393_22924478_22924538_22924631_22924710_22924878_22925041_22926132_22926297_22926505_22926556_22926701_22926815_22927525_22927661_22928125_22928212_22928496_22928616_22929251
H1_mix_00025133	chr14	-	2276	16	FSM	ENSG00000100462.16	ENST00000216350.12	2271	16	0	-5	0	0	multi-exon	FALSE	canonical	3	56	junction_14	279.503241881418	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGCCCCCTGCCACTA	-10	True	NA	-1	True	AATAAA	-24	NA	22929391	22920524	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22921057_22922175_22922241_22922442_22922560_22922741_22922836_22923050_22923161_22924007_22924184_22924269_22924393_22924478_22924538_22924631_22924710_22924878_22925041_22926132_22926297_22926505_22926556_22926701_22926815_22927525_22927615_22928496_22928616_22929166
H1_mix_00025134	chr14	-	2418	17	FSM	ENSG00000100462.16	ENST00000397441.6	2418	17	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_16	200.107432083369	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGCCCCCTGCCACTA	-20	True	NA	-1	True	AATAAA	-24	NA	22929401	22920524	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22921057_22922175_22922241_22922442_22922560_22922741_22922836_22923050_22923161_22924007_22924184_22924269_22924393_22924478_22924538_22924631_22924710_22924878_22925041_22926132_22926297_22926505_22926556_22926701_22926815_22927525_22927661_22928125_22928212_22928496_22928616_22929166
H1_mix_00025138	chr14	-	1611	11	NNC	ENSG00000092036.19	novel	1586	10	NA	NA	0	9235	intron_retention	FALSE	non_canonical	0	0	junction_1	89.2714960107648	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACCACTCCCTGGCCTCT	-6	True	NA	NA	False	NA	NA	NA	22957090	22936992	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_22937023_22946232_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22951554_22951690_22952327_22952460_22952540_22952684_22955099_22955177_22956915
H1_mix_00025139	chr14	-	1734	10	NIC	ENSG00000092036.19	novel	1586	10	NA	NA	0	3	intron_retention	FALSE	canonical	3	37	junction_9	80.367827234043	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAGGATTTTAGTCATTT	11	True	NA	-29	True	AATAAA	-15	NA	22957073	22946232	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22951554_22951690_22952327_22952460_22952540_22952684_22955099_22955177_22956745
H1_mix_00025140	chr14	-	1587	10	FSM	ENSG00000092036.19	ENST00000541587.6	1586	10	0	-1	0	1	multi-exon	FALSE	canonical	3	150	junction_9	52.635011583968	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTAGTCATTTTCCTTG	-6	True	NA	-23	True	AATAAA	-21	NA	22957090	22946226	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22951554_22951690_22952327_22952460_22952540_22952684_22955099_22955177_22956915
H1_mix_00025141	chr14	-	1643	10	FSM	ENSG00000092036.19	ENST00000206474.11	1642	10	0	-1	0	1	multi-exon	FALSE	canonical	3	101	junction_9	63.7194855558814	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTAGTCATTTTCCTTG	-13	False	NA	-23	True	AATAAA	-21	NA	22957154	22946226	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22951554_22951690_22952327_22952460_22952540_22952684_22955099_22955177_22956923
H1_mix_00025142	chr14	-	1483	9	FSM	ENSG00000092036.19	ENST00000342454.12	1474	9	0	-9	0	1	multi-exon	FALSE	canonical	3	81	junction_5	84.2359038652759	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTAGTCATTTTCCTTG	12	True	NA	-23	True	AATAAA	-21	NA	22957129	22946226	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22952327_22952460_22952540_22952684_22955099_22955177_22956923
H1_mix_00025143	chr14	-	1454	9	FSM	ENSG00000092036.19	ENST00000555367.5	1454	9	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_5	75.7511344799535	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCCTGAATAAAGTTATG	-6	True	NA	-57	True	NA	NA	NA	22957126	22946260	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22952327_22952460_22952540_22952684_22955099_22955177_22956915
H1_mix_00025145	chr14	-	983	6	FSM	ENSG00000092036.19	ENST00000554516.5	983	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	92.5345340940343	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGCTAGCTGTCTGTT	-3	True	NA	NA	False	AAAAAG	-41	NA	22957144	22950313	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22950411_22951554_22951690_22952327_22952460_22952540_22952684_22955099_22955177_22956745
H1_mix_00025148	chr14	-	4168	8	FSM	ENSG00000129474.16	ENST00000262713.7	4168	8	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_5	23.2343869016137	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCTTGTGTAACTTTACA	0	True	NA	-1	True	ATTAAA	-38	NA	22982551	22971176	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22973569_22974046_22974116_22974838_22974891_22974973_22975105_22976455_22976519_22976644_22976713_22978343_22978446_22981260
H1_mix_00025150	chr14	-	3257	7	FSM	ENSG00000100802.15	ENST00000299088.11	3360	7	11	92	0	-92	multi-exon	FALSE	canonical	2	5	junction_6	10.1598337694188	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAACCCAAGGGCAGTGA	7	True	NA	NA	False	AATACA	-10	NA	23010132	22985985	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22987635_22987902_22988016_22989741_22989846_22990065_22990128_22995947_22996269_22998426_22999403_23010100
H1_mix_00025151	chr14	-	1798	8	FSM	ENSG00000100802.15	ENST00000397377.5	1776	8	0	-22	0	0	multi-exon	FALSE	canonical	2	5	junction_7	11.5864100548524	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAGTCTGAGAAAGCAAAT	17	True	NA	59	True	GGGGCT	-24	NA	23010122	22987122	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22987635_22987902_22988016_22989741_22989846_22990065_22990128_22995947_22996269_22998426_22998742_22999053_22999403_23010100
H1_mix_00025152	chr14	-	1958	7	FSM	ENSG00000100802.15	ENST00000397382.8	1986	7	34	-6	0	0	multi-exon	FALSE	canonical	1	2	junction_6	11.1716406832459	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAGTCTGAGAAAGCAAAT	7	True	NA	59	True	GGGGCT	-24	NA	23010132	22987122	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22987635_22987902_22988016_22989741_22989846_22990065_22990128_22995947_22996269_22998426_22999157_23010016
H1_mix_00025153	chr14	-	1062	4	NNC	ENSG00000100804.19	novel	1117	4	NA	NA	0	12645	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1605.95814252911	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATATATATATATAT	3	True	NA	NA	False	NA	NA	NA	23034890	23003897	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_23003926_23025855_23026376_23033367_23033675_23034683
H1_mix_00025156	chr14	-	1044	3	FSM	ENSG00000100804.19	ENST00000361611.11	1044	3	0	0	0	0	multi-exon	FALSE	canonical	3	3333	junction_2	71.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCAGCCTGTGTTGCATCT	-7	True	NA	-5	True	NA	NA	NA	23034900	23025855	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23026376_23033367_23033675_23034683
H1_mix_00025157	chr14	-	1514	4	FSM	ENSG00000100804.19	ENST00000493471.2	1117	4	0	-397	0	395	multi-exon	FALSE	canonical	3	158	junction_2	1449.53793404044	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGGAAGGGGAGGACAAAGA	3	True	NA	NA	False	NA	NA	NA	23034890	23025460	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23026376_23027744_23027830_23033367_23033675_23034683
H1_mix_00025160	chr14	-	3426	13	FSM	ENSG00000139880.21	ENST00000487137.7	3415	13	0	-11	0	6	multi-exon	FALSE	canonical	3	49	junction_11	13.9880901722382	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGTTTTTGCACTCAG	-3	True	NA	6	True	AATAAA	-32	NA	23057520	23047055	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23047375_23047460_23048480_23049026_23049276_23049626_23049739_23049821_23049944_23052472_23052610_23053495_23053750_23054140_23054329_23054505_23054674_23054746_23054867_23055058_23055354_23055532_23055858_23057402
H1_mix_00025161	chr14	-	3558	14	FSM	ENSG00000139880.21	ENST00000397359.7	3552	14	0	-6	0	6	multi-exon	FALSE	canonical	0	0	junction_5	28.9451634164864	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGTTTTTGCACTCAG	5	True	NA	6	True	AATAAA	-32	NA	23057538	23047055	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23047375_23047460_23048480_23049026_23049276_23049626_23049739_23049821_23049944_23051969_23052084_23052472_23052610_23053495_23053750_23054140_23054329_23054505_23054674_23054746_23054867_23055058_23055354_23055532_23055858_23057402
H1_mix_00025162	chr14	-	3543	12	FSM	ENSG00000100813.15	ENST00000473758.5	3540	12	0	-3	0	0	multi-exon	FALSE	canonical	1	2	junction_11	221.07509662354	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGCTTTCTTT	2104	False	NA	-3	True	AATAAA	-20	NA	23069525	23058563	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064222_23064354_23064489_23065965_23066009_23067313_23068672_23069475
H1_mix_00025163	chr14	-	2448	12	FSM	ENSG00000100813.15	ENST00000338631.10	2445	12	0	-3	0	0	multi-exon	FALSE	canonical	3	100	junction_11	133.049173784087	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGCTTTCTTT	10	True	NA	-3	True	AATAAA	-20	NA	23071561	23058563	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064258_23064354_23064489_23065965_23066009_23069475_23069618_23071426
H1_mix_00025164	chr14	-	2702	12	NIC	ENSG00000100813.15	novel	2751	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	123	junction_8	151.910423801345	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGCTTTCTTT	9119	False	NA	-3	True	AATAAA	-20	NA	23071549	23058563	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064222_23064354_23064489_23065965_23066009_23069475_23069618_23071124
H1_mix_00025165	chr14	-	2751	12	FSM	ENSG00000100813.15	ENST00000557515.5	2751	12	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_9	148.797660605444	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGCTTTCTTT	6	True	NA	-3	True	AATAAA	-20	NA	23071565	23058563	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064258_23064354_23064486_23065965_23066009_23069475_23069618_23071124
H1_mix_00025166	chr14	-	2754	12	FSM	ENSG00000100813.15	ENST00000397341.7	2738	12	0	-16	0	0	multi-exon	FALSE	canonical	3	186	junction_11	111.571790622943	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGCTTTCTTT	6	True	NA	-3	True	AATAAA	-20	NA	23071565	23058563	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064258_23064354_23064489_23065965_23066009_23069475_23069618_23071124
H1_mix_00025167	chr14	-	2566	13	FSM	ENSG00000100813.15	ENST00000357481.6	2563	13	0	-3	0	0	multi-exon	FALSE	canonical	3	78	junction_12	154.709315240622	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGCTTTCTTT	9051	False	NA	-3	True	AATAAA	-20	NA	23071617	23058563	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064258_23064354_23064489_23065965_23066009_23069475_23069618_23071124_23071187_23071426
H1_mix_00025168	chr14	-	4241	18	NIC	ENSG00000100813.15	novel	4460	19	NA	NA	63	0	combination_of_known_junctions	FALSE	canonical	3	123	junction_8	173.143519083713	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGCTTTCTTT	9917	False	NA	-3	True	AATAAA	-20	NA	23095073	23058563	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064222_23064354_23064489_23065965_23066009_23069475_23069618_23078150_23078267_23078819_23079039_23079546_23080810_23081747_23081837_23090521_23090634_23093478_23093545_23094974
H1_mix_00025169	chr14	-	4200	18	NNC	ENSG00000100813.15	novel	4460	19	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_12	179.576607010677	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGCTTTCTTT	9998	False	NA	-3	True	AATAAA	-20	NA	23095110	23058563	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064258_23064354_23064489_23065965_23066009_23069475_23069618_23078150_23078267_23078933_23079039_23079546_23080810_23081747_23081837_23090521_23090634_23093478_23093545_23094974
H1_mix_00025170	chr14	-	4337	18	NIC	ENSG00000100813.15	novel	4460	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	133	junction_9	172.616522001285	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGCTTTCTTT	-4	True	NA	-3	True	AATAAA	-20	NA	23095136	23058563	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064258_23064354_23064486_23065965_23066009_23069475_23069618_23078150_23078267_23078819_23079039_23079546_23080810_23081747_23081837_23090521_23090634_23093478_23093545_23094974
H1_mix_00025171	chr14	-	4938	19	FSM	ENSG00000100813.15	ENST00000262710.5	4935	19	0	-3	0	0	multi-exon	FALSE	canonical	3	87	junction_15	174.659925301063	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGCTTTCTTT	9529	False	NA	-3	True	AATAAA	-20	NA	23095614	23058563	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064258_23064354_23064489_23065965_23066009_23069475_23069618_23078150_23078267_23078819_23079039_23079546_23080810_23081747_23081837_23089981_23090102_23090521_23090634_23093478_23093545_23094974
H1_mix_00025172	chr14	-	4421	19	FSM	ENSG00000100813.15	ENST00000555053.5	4173	19	247	-495	0	0	multi-exon	FALSE	canonical	3	87	junction_15	189.105570162982	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGCTTTCTTT	-4	True	NA	-3	True	AATAAA	-20	NA	23095136	23058563	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064222_23064354_23064486_23065965_23066009_23069475_23069618_23078150_23078267_23078819_23079039_23079546_23080810_23081747_23081837_23089981_23090102_23090521_23090634_23093478_23093545_23094974
H1_mix_00025180	chr14	-	4262	12	NNC	ENSG00000092068.21	novel	4236	11	NA	NA	0	42859	intron_retention	FALSE	canonical	0	0	junction_1	775.509387381839	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAGCTCTAATACATAAAA	0	True	NA	NA	False	NA	NA	NA	23183660	23082435	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_23082462_23125294_23127344_23128018_23128197_23129649_23129800_23131460_23131558_23137920_23138025_23139423_23139548_23140470_23140625_23143078_23143205_23165284_23165437_23166335_23166541_23182763
H1_mix_00025181	chr14	-	4236	11	FSM	ENSG00000092068.21	ENST00000316902.12	4236	11	0	0	0	0	multi-exon	FALSE	canonical	3	2430	junction_2	118.76619889514	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGGTGTTGGTAATTA	0	True	NA	29	True	AATAAA	-19	NA	23183660	23125294	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23127344_23128018_23128197_23129649_23129800_23131460_23131558_23137920_23138025_23139423_23139548_23140470_23140625_23143078_23143205_23165284_23165437_23166335_23166541_23182763
H1_mix_00025183	chr14	-	1752	9	FSM	ENSG00000092068.21	ENST00000453702.5	1752	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	879.768213437494	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCCCTCCCCATCATACC	-7	True	NA	NA	False	NA	NA	NA	23154401	23126667	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23127344_23128018_23128197_23129649_23129800_23131460_23131558_23137920_23138025_23139423_23139548_23140470_23140625_23143078_23143205_23154258
H1_mix_00025186	chr14	-	721	3	Antisense	novelGene_ENSG00000215277.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	10.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACCCAGTAAATCGAAATG	NA	False	NA	NA	False	NA	NA	NA	23207524	23194930	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr14_-_23195261_23200703_23200863_23207292
H1_mix_00025187	chr14	-	4986	2	FSM	ENSG00000215271.9	ENST00000357460.7	4986	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGATGGAGTCTCGCTC	-18	True	NA	NA	False	NA	NA	NA	23286132	23272421	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23277188_23285912
H1_mix_00025188	chr14	-	720	2	ISM	ENSG00000215271.9	ENST00000558278.1	563	3	-3	109	-3	-109	5prime_fragment	FALSE	canonical	3	31	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGATGTAGTGGTGAG	-6	True	NA	-7	True	ATTAAA	-20	NA	23286120	23285099	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_-_23285612_23285912
H1_mix_00025190	chr14	-	2657	10	FSM	ENSG00000092096.19	ENST00000354772.10	2372	10	27	-312	0	308	multi-exon	FALSE	canonical	3	196	junction_6	45.7370368870774	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTTAAGCAAAAAGGGAAT	-3	True	NA	-15	True	AATAAA	-15	NA	23352860	23346005	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23346937_23347100_23347213_23347513_23347732_23347890_23347997_23348160_23348307_23348505_23348672_23349271_23349427_23351751_23351856_23351947_23352452_23352645
H1_mix_00025191	chr14	-	2463	10	FSM	ENSG00000092096.19	ENST00000397267.6	2455	10	0	-8	0	8	multi-exon	FALSE	canonical	3	58	junction_2	78.7527777287887	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCCCTCCCTTCTGTTT	NA	False	NA	-7	True	AATAAA	-34	NA	23352912	23346305	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23346937_23347100_23347213_23347459_23347732_23347890_23347997_23348160_23348307_23348505_23348672_23349271_23349427_23351751_23351856_23351947_23352452_23352645
H1_mix_00025193	chr14	-	2653	6	FSM	ENSG00000100842.13	ENST00000216733.8	2653	6	0	0	0	0	multi-exon	TRUE	canonical	3	157	junction_4	27.8897830755279	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGATTCGACATTTGCTG	-5	True	NA	-12	True	AATAAA	-14	NA	23365172	23356405	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23357661_23358875_23358966_23359316_23360040_23360140_23360282_23360554_23360834_23365007
H1_mix_00025194	chr14	-	2704	5	FSM	ENSG00000100842.13	ENST00000351354.3	2704	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	80.812669180024	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCTTCTTGGGAGCATG	783	False	NA	-26	True	AATAAA	-22	NA	23365752	23356655	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23357661_23358875_23358966_23359316_23360040_23360140_23360282_23365007
H1_mix_00025195	chr14	-	9296	10	FSM	ENSG00000136367.15	ENST00000419474.5	9296	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_8	9.57362632379467	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAAGTGTTTTTTTTCCTA	-11	True	NA	1	True	AATACA	-33	NA	23551765	23520856	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23522942_23523202_23526680_23526846_23526974_23527603_23527805_23529709_23529769_23530119_23530195_23531480_23531722_23532566_23533085_23533284_23535375_23551342
H1_mix_00025196	chr14	-	660	2	FSM	ENSG00000213983.12	ENST00000554892.1	658	2	0	-2	0	0	multi-exon	FALSE	canonical	3	509	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGTATATTTGAAGTGG	9376	False	NA	-14	True	AATAAA	-35	NA	23560311	23559564	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23559851_23559937
H1_mix_00025197	chr14	-	2958	7	FSM	ENSG00000213983.12	ENST00000554554.5	2955	7	0	-3	0	0	multi-exon	FALSE	canonical	3	449	junction_6	37.5296179333366	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGTATATTTGAAGTGG	9041	False	NA	-14	True	AATAAA	-35	NA	23563949	23559564	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23559851_23559937_23560037_23560254_23560419_23561295_23561432_23561511_23562416_23562503_23563639_23563715
H1_mix_00025198	chr14	-	2600	22	FSM	ENSG00000213983.12	ENST00000397120.8	2598	22	0	-2	0	0	multi-exon	FALSE	canonical	3	252	junction_21	78.9978902671879	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGTATATTTGAAGTGG	-16	True	NA	-14	True	AATAAA	-35	NA	23567791	23559564	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23559851_23559937_23560037_23560254_23560419_23561295_23561432_23561511_23561636_23561961_23562067_23562287_23562416_23562503_23562594_23563379_23563503_23563583_23563639_23563715_23563857_23564045_23564160_23564332_23564389_23564561_23564661_23565118_23565200_23565605_23565702_23565815_23565893_23566063_23566161_23566277_23566420_23566561_23566687_23567110_23567320_23567738
H1_mix_00025199	chr14	-	3298	21	FSM	ENSG00000213983.12	ENST00000308724.9	3298	21	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_6	73.503333257751	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGTATATTTGAAGTGG	9928	False	NA	-14	True	AATAAA	-35	NA	23568070	23559564	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23559851_23559937_23560037_23560254_23560419_23561295_23561432_23561511_23561636_23561961_23562067_23562287_23562416_23562503_23562594_23563379_23563503_23563583_23563639_23563715_23563857_23564045_23564160_23564332_23564389_23564561_23564661_23565118_23565200_23565605_23565702_23565815_23565893_23566063_23566161_23566277_23566420_23566561_23566687_23567110
H1_mix_00025200	chr14	-	2672	20	FSM	ENSG00000213983.12	ENST00000460049.6	2672	20	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_18	128.725695605583	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAATAAAGCCCAATAAAG	-23	True	NA	-57	True	NA	NA	NA	23567798	23559607	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23559851_23559937_23560037_23560254_23560419_23561295_23561432_23561511_23561636_23561961_23562067_23562287_23562416_23562503_23562594_23563379_23563503_23563583_23563639_23563715_23563857_23564045_23564222_23564332_23564389_23564561_23564661_23565118_23565200_23565605_23565702_23565815_23566161_23566277_23566420_23567110_23567320_23567738
H1_mix_00025201	chr14	-	7100	27	Fusion	ENSG00000092051.18_ENSG00000213983.12	novel	2598	22	NA	NA	-36	0	multi-exon	FALSE	canonical	3	96	junction_21	114.927324604849	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAATAAAGCCCAATAAAG	-13	True	NA	-57	True	NA	NA	NA	23578826	23559607	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr14_-_23559851_23559937_23560037_23560254_23560419_23561295_23561432_23561511_23561636_23561961_23562067_23562287_23562416_23562503_23562594_23563379_23563503_23563583_23563639_23563715_23563857_23564045_23564160_23564332_23564389_23564561_23564661_23565118_23565200_23565605_23565702_23565815_23565893_23566063_23566161_23566277_23566420_23566561_23566687_23567110_23567316_23567738_23569718_23570927_23571461_23571801_23571921_23575684_23576457_23577074_23577625_23578179
H1_mix_00025202	chr14	-	459	3	FSM	ENSG00000213983.12	ENST00000557391.1	459	3	0	0	0	0	multi-exon	FALSE	canonical	3	509	junction_1	23.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGAACCTACACCTGAGGG	9235	False	NA	NA	False	NA	NA	NA	23560452	23559688	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23559851_23559937_23560037_23560254
H1_mix_00025203	chr14	-	1254	8	NNC	ENSG00000213983.12	novel	2554	18	NA	NA	124	-24	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_6	169.070447821406	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACCCCAGGGGGCCCCAG	8133	False	NA	NA	False	NA	NA	NA	23562876	23559712	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_23559851_23559937_23560037_23560254_23560419_23561295_23561432_23561511_23561636_23561961_23562054_23562287_23562416_23562503
H1_mix_00025211	chr14	-	1670	15	NIC	ENSG00000213983.12	novel	891	8	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	96	junction_14	108.816827930318	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTTTATTATTACCTTG	-37	True	NA	-20	True	ATTAAA	-15	NA	23567812	23563097	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_23563283_23563379_23563503_23563583_23563639_23563715_23563857_23564045_23564160_23564332_23564389_23564561_23564661_23565118_23565200_23565605_23565702_23565815_23565893_23566063_23566161_23566277_23566420_23566561_23566687_23567110_23567316_23567738
H1_mix_00025212	chr14	-	1504	14	NIC	ENSG00000213983.12	novel	747	7	NA	NA	11	-3	combination_of_known_junctions	FALSE	canonical	3	41	junction_12	121.439979574493	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGTTTTATTATTACCTT	7	True	NA	-21	True	ATTAAA	-14	NA	23567768	23563098	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_23563283_23563379_23563503_23563583_23563639_23563715_23563857_23564045_23564160_23564332_23564389_23564561_23564661_23565118_23565200_23565605_23565702_23565815_23565893_23566063_23566161_23566277_23566420_23567110_23567320_23567738
H1_mix_00025215	chr14	-	1301	6	FSM	ENSG00000213983.12	ENST00000553629.5	1301	6	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_5	63.5244834689744	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACACAGTCTGTCTTAGT	-13	True	NA	NA	False	NA	NA	NA	23567788	23564979	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23565200_23565605_23566161_23566277_23566420_23566561_23566687_23567110_23567320_23567738
H1_mix_00025221	chr14	-	4268	6	FSM	ENSG00000092051.18	ENST00000356300.9	4265	6	0	-3	0	3	multi-exon	FALSE	canonical	3	143	junction_5	37.98631332467	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGATTGTCATCTCCTTT	23	True	NA	-2	True	AATAAA	-17	NA	23578790	23568034	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23569718_23570927_23571461_23571801_23571921_23575684_23576457_23577074_23577625_23578179
H1_mix_00025222	chr14	-	2969	2	FSM	ENSG00000215256.5	ENST00000556379.2	2859	2	24	-134	3	134	multi-exon	FALSE	canonical	3	44	junction_1	0	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGTGGGAAGTGAGATA	-23	True	NA	NA	False	TTTAAA	-25	NA	23954180	23938596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23941159_23953773
H1_mix_00025223	chr14	-	2539	2	FSM	ENSG00000215256.5	ENST00000667602.1	3270	2	747	-16	433	0	multi-exon	FALSE	canonical	1	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGAGTTTTGTGTCATG	1676	False	NA	-1	True	AATAAA	-24	NA	23953419	23938730	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23941159_23953308
H1_mix_00025224	chr14	-	2764	3	FSM	ENSG00000215256.5	ENST00000555045.2	2759	3	11	-16	0	7	multi-exon	FALSE	canonical	3	17	junction_2	13.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTGTGTCATGATTAGAA	902	False	NA	6	True	AATAAA	-31	NA	23954193	23938723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23941159_23953773_23954034_23954124
H1_mix_00025225	chr14	-	3055	2	FSM	ENSG00000215256.5	ENST00000666884.1	3031	2	0	-24	0	7	multi-exon	FALSE	canonical	3	6	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTGTGTCATGATTAGAA	902	False	NA	6	True	AATAAA	-31	NA	23954193	23938723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23941159_23953573
H1_mix_00025227	chr14	-	3484	3	FSM	ENSG00000129535.13	ENST00000561028.6	3543	3	0	59	0	-59	multi-exon	FALSE	canonical	2	6	junction_2	1.5	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAATAAATGCATTTAAATA	7	True	NA	NA	False	NA	NA	NA	24114949	24078720	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24081569_24082467_24082876_24114721
H1_mix_00025228	chr14	-	1133	5	NIC	ENSG00000100908.14	novel	953	5	NA	NA	-3	2	intron_retention	FALSE	canonical	3	91	junction_3	121.017302481918	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGTGGTATAACTATATT	16	True	NA	-11	True	AATAAA	-17	NA	24141588	24138962	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_24139197_24139359_24139455_24139544_24139790_24140888_24140966_24141106
H1_mix_00025229	chr14	-	953	5	FSM	ENSG00000100908.14	ENST00000419198.6	953	5	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_3	31.1849322590254	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAGTGGTATAACTATA	19	True	NA	-13	True	AATAAA	-15	NA	24141585	24138964	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24139197_24139359_24139455_24139544_24139615_24140888_24140966_24141106
H1_mix_00025230	chr14	-	844	6	FSM	ENSG00000100908.14	ENST00000216799.9	838	6	0	-6	0	0	multi-exon	FALSE	canonical	3	178	junction_5	75.352504935138	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTATAACTATATTTATT	13	True	NA	-7	True	AATAAA	-21	NA	24141591	24138958	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24139197_24139359_24139455_24139544_24139615_24140888_24140966_24141106_24141317_24141437
H1_mix_00025231	chr14	-	771	6	FSM	ENSG00000100908.14	ENST00000560600.1	771	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	142.700525577168	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCACCTTGTGGACTTTGA	13	True	NA	NA	False	NA	NA	NA	24141487	24139129	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24139197_24139359_24139455_24139544_24139817_24140888_24140966_24141106_24141317_24141437
H1_mix_00025232	chr14	-	755	10	FSM	ENSG00000100911.16	ENST00000560410.5	755	10	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_9	523.263430103758	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTTCTGGCGTGTGTCA	5	True	NA	-8	True	AATAAA	-21	NA	24146605	24143364	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24143490_24143584_24143672_24143974_24144030_24144191_24144260_24144399_24144469_24145057_24145156_24145242_24145274_24145378_24145466_24145709_24145773_24146533
H1_mix_00025233	chr14	-	793	11	FSM	ENSG00000100911.16	ENST00000216802.10	793	11	0	0	0	0	multi-exon	FALSE	canonical	3	1345	junction_6	184.464088646002	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTTCTGGCGTGTGTCA	0	True	NA	-8	True	AATAAA	-21	NA	24146610	24143364	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24143490_24143584_24143672_24143974_24144030_24144191_24144260_24144399_24144469_24145057_24145156_24145242_24145274_24145378_24145466_24145709_24145773_24146207_24146241_24146533
H1_mix_00025234	chr14	-	1525	11	FSM	ENSG00000100911.16	ENST00000558273.5	1502	11	0	-23	0	0	multi-exon	TRUE	canonical	3	47	junction_9	535.674574718644	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATATGTTGTGTGGATTC	0	True	NA	-25	True	AATAAA	-4	NA	24147235	24143381	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24143490_24143584_24143672_24143974_24144030_24144191_24144260_24144399_24144469_24145057_24145156_24145242_24145274_24145378_24145466_24145709_24145897_24146207_24146241_24146533
H1_mix_00025235	chr14	-	2756	7	FSM	ENSG00000100911.16	ENST00000558931.5	2754	7	0	-2	0	0	multi-exon	FALSE	canonical	3	1610	junction_3	155.127546088873	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGGACTAGAAGGAAAATAAA	24	False	NA	-48	True	AAGAAA	-22	NA	24147258	24143404	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24143490_24143584_24143672_24143974_24144030_24144191_24144260_24144399_24145274_24145378_24146241_24146533
H1_mix_00025237	chr14	-	3498	30	FSM	ENSG00000196497.17	ENST00000354464.11	3498	30	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_19	42.9782457484015	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTGAGAGCAAGAAGGCT	-2	True	NA	-14	True	AATAAA	-28	NA	24188816	24180218	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24180573_24180688_24180759_24181512_24181618_24181710_24181844_24181954_24182164_24182277_24182404_24182791_24182843_24182975_24183170_24183249_24183356_24183455_24183514_24183589_24183668_24183782_24183899_24183997_24184110_24184297_24184419_24184649_24184764_24184866_24184981_24185182_24185313_24185458_24185568_24185860_24185971_24186128_24186183_24186286_24186452_24186707_24186792_24186877_24186980_24187084_24187151_24187399_24187580_24187666_24187797_24188215_24188258_24188343_24188424_24188551_24188639_24188718
H1_mix_00025238	chr14	-	1865	15	FSM	ENSG00000196497.17	ENST00000561462.5	1864	15	0	-1	0	0	multi-exon	FALSE	canonical	2	9	junction_1	107.529137010033	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTGAGAGCAAGAAGGCT	8052	False	NA	-14	True	AATAAA	-28	NA	24184675	24180218	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24180573_24180682_24180759_24181512_24181618_24181710_24181844_24181954_24182164_24182277_24182404_24182791_24182843_24182975_24183170_24183249_24183356_24183455_24183514_24183589_24183668_24183782_24183899_24183997_24184110_24184297_24184419_24184649
H1_mix_00025239	chr14	-	3485	30	FSM	ENSG00000196497.17	ENST00000560155.5	3485	30	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_6	79.2617242271912	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCTGTCCCTGAGGCTGG	6765	False	NA	-100	True	NA	NA	NA	24188869	24180304	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24180573_24180688_24180759_24181512_24181618_24181710_24181844_24181954_24182164_24182277_24182424_24182791_24182843_24182975_24183170_24183249_24183356_24183455_24183514_24183589_24183668_24183782_24183899_24183997_24184110_24184297_24184419_24184649_24184764_24184866_24184981_24185182_24185313_24185458_24185568_24185860_24185971_24186128_24186183_24186286_24186452_24186707_24186792_24186877_24186980_24187084_24187151_24187399_24187580_24187666_24187797_24188215_24188258_24188343_24188424_24188551_24188639_24188718
H1_mix_00025241	chr14	-	2200	6	FSM	ENSG00000100926.15	ENST00000261789.9	2200	6	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_2	53.4355686785497	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCATGCAGTTGGAGGTT	6	True	NA	-9	True	AATAAA	-16	NA	24195441	24189148	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24189809_24190379_24190654_24192170_24192357_24192647_24193270_24194674_24195037_24195345
H1_mix_00025242	chr14	-	2055	5	FSM	ENSG00000100926.15	ENST00000396854.8	2055	5	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	57.8338136387356	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACAAGATCCCTGCCCTC	16	True	NA	-24	True	AATAAA	-12	NA	24195618	24190041	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24190654_24192170_24192357_24192647_24193270_24194674_24195037_24195345
H1_mix_00025243	chr14	-	598	5	NNC	ENSG00000129559.13	novel	651	5	NA	NA	0	16334	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1858.80680814333	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTGTGTGGTGGGTATT	9997	False	NA	NA	False	AAAACA	-6	NA	24232303	24200522	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_24200570_24216857_24217224_24218132_24218216_24218383_24218432_24232249
H1_mix_00025244	chr14	-	980	6	FSM	ENSG00000254505.11	ENST00000347519.12	980	6	0	0	0	0	multi-exon	FALSE	canonical	3	638	junction_5	30.0532860100189	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTGTCTATACTGCCT	-16	True	NA	-40	True	AATAAA	-16	NA	24213488	24209614	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24209936_24210347_24210484_24210653_24210769_24211414_24211593_24211679_24211830_24213408
H1_mix_00025248	chr14	-	736	6	NIC	ENSG00000213920.9	novel	723	6	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	65.3715534464342	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCACAGTGTGGGGAGT	26	False	NA	-12	True	ATTAAA	-28	NA	24216034	24213945	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_24214152_24214261_24214396_24214491_24214600_24215551_24215663_24215736_24215798_24215918
H1_mix_00025249	chr14	-	889	4	FSM	ENSG00000213920.9	ENST00000530222.5	889	4	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	21.2289111041209	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACAGTGTGGGGAGTTTC	23	False	NA	-9	True	ATTAAA	-31	NA	24216037	24213942	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24214152_24214309_24214396_24214491_24214600_24215551
H1_mix_00025250	chr14	-	582	5	FSM	ENSG00000213920.9	ENST00000396833.2	582	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	73.3122602297869	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACAGTGTGGGGAGTTTC	-5	True	NA	-9	True	ATTAAA	-31	NA	24216065	24213942	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24214152_24214545_24214600_24215551_24215663_24215736_24215798_24215918
H1_mix_00025251	chr14	-	723	6	FSM	ENSG00000213920.9	ENST00000288087.12	723	6	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	19.8957281847134	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACAGTGTGGGGAGTTTC	-6	True	NA	-9	True	ATTAAA	-31	NA	24216066	24213942	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24214152_24214309_24214396_24214491_24214600_24215551_24215663_24215736_24215798_24215918
H1_mix_00025252	chr14	-	682	4	FSM	ENSG00000129559.13	ENST00000396828.8	626	4	0	-56	0	56	multi-exon	FALSE	canonical	3	84	junction_1	1946.36230497362	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAGCAGGCTGAAGGAAT	9997	False	NA	2	True	AATAAA	-23	NA	24232303	24216800	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24217224_24218058_24218216_24218383_24218432_24232249
H1_mix_00025253	chr14	-	672	4	FSM	ENSG00000129559.13	ENST00000250495.10	616	4	0	-56	0	56	multi-exon	FALSE	canonical	3	4058	junction_3	160.800773906374	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAGCAGGCTGAAGGAAT	-12	True	NA	2	True	AATAAA	-23	NA	24232367	24216800	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24217224_24218132_24218216_24218383_24218432_24232249
H1_mix_00025254	chr14	-	848	4	FSM	ENSG00000129559.13	ENST00000527046.5	847	4	0	-1	0	-1	multi-exon	FALSE	canonical	3	78	junction_3	2033.901341429	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTCTTCTGTTGCACAA	846	False	NA	-18	True	AATAAA	-21	NA	24232002	24216857	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24217224_24218132_24218216_24218383_24218432_24231651
H1_mix_00025255	chr14	-	651	5	FSM	ENSG00000129559.13	ENST00000531430.5	651	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	2163.95591163499	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGGAATCTTTCTTCTG	10016	False	NA	-26	True	AATAAA	-13	NA	24232325	24216865	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24217224_24218132_24218216_24218383_24218432_24231651_24231738_24232249
H1_mix_00025257	chr14	-	653	3	FSM	ENSG00000129559.13	ENST00000524927.1	653	3	0	0	0	0	multi-exon	FALSE	canonical	3	4058	junction_2	147	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGTTTAAAGTTAGAAGAAA	1	True	NA	NA	False	NA	NA	NA	24232354	24217715	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24218216_24218383_24218432_24232249
H1_mix_00025258	chr14	-	2262	3	FSM	ENSG00000129559.13	ENST00000533242.1	2300	3	0	38	0	-38	multi-exon	TRUE	canonical	3	8	junction_1	21.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAATGTTATATAAATTAA	0	True	NA	NA	False	CATAAA	-42	NA	24232355	24226642	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24228713_24231651_24231738_24232249
H1_mix_00025260	chr14	-	1598	8	NIC	ENSG00000092330.18	novel	1801	9	NA	NA	54	0	intron_retention	TRUE	canonical	3	76	junction_2	55.0398742286176	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGCCTTGATGTGAAGGA	374	False	NA	-24	True	ATTAAA	-18	NA	24242288	24239642	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_24240156_24240262_24240331_24240418_24240876_24241019_24241117_24241203_24241312_24241674_24241777_24241889_24241995_24242140
H1_mix_00025261	chr14	-	1801	9	FSM	ENSG00000092330.18	ENST00000267415.12	1801	9	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	61.115541190437	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGCCTTGATGTGAAGGA	4	True	NA	-24	True	ATTAAA	-18	NA	24242623	24239642	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24239932_24240063_24240156_24240262_24240331_24240418_24240876_24241019_24241117_24241203_24241312_24241674_24241777_24241889_24241995_24242140
H1_mix_00025262	chr14	-	2168	6	FSM	ENSG00000092330.18	ENST00000399423.8	2168	6	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_3	23.6220236220354	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGCCTTGATGTGAAGGA	-1	True	NA	-24	True	ATTAAA	-18	NA	24242663	24239642	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24240876_24241019_24241117_24241203_24241312_24241674_24241777_24241889_24241995_24242140
H1_mix_00025264	chr14	-	1946	17	FSM	ENSG00000100949.15	ENST00000216840.11	1946	17	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_16	19.0376887712243	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGTCGCTGCTATCAC	-36	True	NA	-1	True	AATAAA	-29	NA	24271597	24265537	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24265764_24266429_24266518_24266775_24266890_24267659_24267777_24267869_24267959_24268109_24268199_24268368_24268421_24268513_24268620_24268724_24268827_24268910_24268994_24269079_24269164_24269490_24269695_24269952_24270141_24270333_24270459_24270836_24270948_24271112_24271170_24271486
H1_mix_00025265	chr14	-	2265	16	FSM	ENSG00000100949.15	ENST00000399409.7	2265	16	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_13	12.8097185327738	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGTCGCTGCTATCAC	-38	True	NA	-1	True	AATAAA	-29	NA	24271599	24265537	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24265764_24266429_24266518_24266775_24266890_24267659_24267777_24267869_24267959_24268109_24268199_24268368_24268421_24268513_24268620_24268724_24268827_24268910_24268994_24269079_24269164_24269490_24269695_24269952_24270141_24270333_24270459_24270836_24270948_24271112
H1_mix_00025266	chr14	-	1997	16	FSM	ENSG00000100949.15	ENST00000560998.5	1997	16	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_15	19.632173140593	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGAATGGAGAGGCCCTC	51	True	NA	-33	True	NA	NA	NA	24271510	24265569	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24265764_24266429_24266518_24266775_24266890_24267659_24267777_24267869_24267959_24268109_24268421_24268513_24268620_24268724_24268827_24268910_24268994_24269079_24269164_24269490_24269695_24269952_24270141_24270333_24270459_24270836_24270948_24271112_24271170_24271486
H1_mix_00025269	chr14	-	532	1	FSM	ENSG00000157379.14	ENST00000559084.1	528	1	0	-4	0	4	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGACTGCTGATTCTCT	8625	False	NA	-1	True	AATAAA	-24	NA	24291125	24290593	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24290600_24291100
H1_mix_00025270	chr14	-	1427	9	FSM	ENSG00000157379.14	ENST00000288111.12	1427	9	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	9.4794184948234	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTTGACTGCTGATT	-30	True	NA	-5	True	AATAAA	-20	NA	24299780	24290597	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24290996_24291138_24291220_24291555_24291626_24292183_24292331_24292651_24292785_24296508_24296589_24296737_24296882_24298956_24299131_24299580
H1_mix_00025271	chr14	-	2027	7	FSM	ENSG00000157379.14	ENST00000561273.5	2027	7	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	6.51707159867238	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTCTTGGAGCTAATAAAA	-11	True	NA	23	True	NA	NA	NA	24299761	24290635	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24290996_24291138_24291626_24292183_24292785_24296508_24296589_24296737_24296882_24298956_24299131_24299580
H1_mix_00025272	chr14	-	1605	5	FSM	ENSG00000136305.12	ENST00000554411.6	1225	5	-286	-94	-286	94	multi-exon	TRUE	canonical	1	2	junction_1	1.29903810567666	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTCAAGTATGGAGTTCA	3185	False	NA	96	True	NA	NA	NA	24308263	24305092	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24305766_24305946_24306138_24306373_24306524_24307370_24307516_24307817
H1_mix_00025273	chr14	-	1057	4	FSM	ENSG00000100445.18	ENST00000538105.6	1041	4	0	-16	0	0	multi-exon	FALSE	canonical	3	78	junction_2	143.327906874024	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCTCATCTCTTTGGC	394	False	NA	-13	True	AATAAA	-19	NA	24442448	24439765	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24440493_24440782_24440927_24442177_24442261_24442345
H1_mix_00025274	chr14	-	1304	4	ISM	ENSG00000100445.18	ENST00000555365.5	976	5	109	-136	21	0	3prime_fragment	FALSE	canonical	3	31	junction_3	166.533947156595	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCTCATCTCTTTGGC	186	False	NA	-13	True	AATAAA	-19	NA	24442656	24439765	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_-_24440493_24440782_24440927_24441673_24441796_24442345
H1_mix_00025275	chr14	-	1507	5	FSM	ENSG00000100445.18	ENST00000544691.6	1507	5	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_3	32.4075608461976	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCTCATCTCTTTGGC	11	True	NA	-13	True	AATAAA	-19	NA	24442776	24439765	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24440493_24440782_24440927_24441673_24441796_24442177_24442261_24442345
H1_mix_00025276	chr14	-	1206	6	FSM	ENSG00000100445.18	ENST00000399395.8	1206	6	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_5	79.288334577036	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCTCATCTCTTTGGC	11	True	NA	-13	True	AATAAA	-19	NA	24442776	24439765	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24440493_24440782_24440927_24441673_24441796_24442177_24442261_24442345_24442453_24442753
H1_mix_00025277	chr14	-	976	5	FSM	ENSG00000100445.18	ENST00000555365.5	976	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	149.320125904046	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTAATCTTTTCAACTC	22	True	NA	NA	False	NA	NA	NA	24442765	24439901	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24440493_24440782_24440927_24441673_24441796_24442345_24442453_24442753
H1_mix_00025286	chr14	-	4138	6	FSM	ENSG00000168952.16	ENST00000323944.10	4190	6	-150	202	-150	0	multi-exon	FALSE	canonical	3	164	junction_4	12.2212928939618	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTTTCTTGCAGTTAT	NA	False	NA	-6	True	ATTAAA	-20	NA	25050297	24809655	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24812733_24819036_24819195_24855935_24856102_24857026_24857158_24974664_24974851_25049877
H1_mix_00025287	chr14	-	280	1	FSM	ENSG00000257179.1	ENST00000551091.1	273	1	8	-15	8	15	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAACTGTGTACTTCTGGT	112	False	NA	NA	False	NA	NA	NA	25267328	25267048	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_25267000_25267300
H1_mix_00025288	chr14	-	6867	5	FSM	ENSG00000139910.20	ENST00000539517.7	6990	5	0	123	0	-120	multi-exon	TRUE	canonical	3	9	junction_1	13.9731886124821	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATATAAACAAGCAAAAACTG	0	True	NA	NA	False	NA	NA	NA	26598033	26443212	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_26448964_26472319_26472392_26479976_26480144_26595409_26595554_26597300
H1_mix_00025289	chr14	-	896	5	FSM	ENSG00000139910.20	ENST00000344429.9	896	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	4.32290411644765	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAAGAGTAAGTTTGATC	15	True	NA	-10	True	AATAAA	-16	NA	26597440	26470117	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_26470491_26472319_26472392_26479976_26480144_26595409_26595554_26597300
H1_mix_00025290	chr14	-	3890	18	FSM	ENSG00000184304.17	ENST00000331968.11	3833	18	-55	-2	-55	2	multi-exon	FALSE	canonical	3	19	junction_14	5.61510567707375	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCCACCTCATTGAACT	NA	False	NA	1	True	AATAAA	-20	NA	29927902	29576476	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_29577457_29578274_29578361_29597490_29597759_29599026_29599126_29599655_29599818_29624151_29624259_29626483_29626557_29629040_29629094_29630741_29631022_29632868_29632947_29634417_29634542_29636289_29636495_29638488_29638567_29638693_29638905_29663698_29663860_29666076_29666209_29725535_29725675_29927248
H1_mix_00025291	chr14	-	3871	19	FSM	ENSG00000184304.17	ENST00000415220.6	3189	19	-219	-463	-14	0	multi-exon	FALSE	canonical	3	18	junction_14	6.3469638897101	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCCACCTCATTGAA	-24	True	NA	-1	True	AATAAA	-18	NA	29927861	29576478	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_29577457_29578274_29578361_29597490_29597759_29599026_29599126_29599655_29599818_29624151_29624259_29626483_29626557_29629040_29629094_29630741_29631022_29632868_29632947_29634417_29634542_29636289_29636495_29638488_29638567_29638693_29638905_29656475_29656500_29663698_29663860_29666076_29666209_29725535_29725675_29927248
H1_mix_00025292	chr14	-	513	1	FSM	ENSG00000258648.1	ENST00000557130.1	554	1	28	13	28	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGAGCCCTGACCCAGGC	NA	False	NA	NA	False	AAGAAA	-23	NA	30683570	30683057	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_30683100_30683600
H1_mix_00025293	chr14	-	4200	18	FSM	ENSG00000196792.12	ENST00000357479.10	4195	18	0	-5	0	0	multi-exon	FALSE	canonical	2	7	junction_10	11.280015705896	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTGAGTCCTTCATTTT	17	True	NA	-15	True	ATTAAA	-18	NA	31026379	30893798	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_30895581_30895661_30895749_30902535_30902644_30905417_30905559_30906876_30907045_30911040_30911163_30911776_30911825_30912006_30912183_30913523_30913658_30918965_30919107_30929200_30929312_30935162_30935305_30936494_30936625_30947089_30947264_30950862_30950945_30955619_30955694_30956138_30956243_31025903
H1_mix_00025294	chr14	-	2300	17	NIC	ENSG00000196792.12	novel	4195	18	NA	NA	85	-98	combination_of_known_junctions	FALSE	canonical	2	4	junction_10	11.080493840529	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGATGCTCTTGCCAAA	2	True	NA	NA	False	NA	NA	NA	31026234	30895442	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_30895581_30895661_30895749_30902535_30902644_30905417_30905559_30906876_30907045_30911040_30911163_30911776_30911825_30912006_30912183_30913523_30913658_30918965_30919107_30935162_30935305_30936494_30936625_30947089_30947264_30950862_30950945_30955619_30955694_30956138_30956243_31025903
H1_mix_00025297	chr14	-	3750	18	ISM	ENSG00000092148.14	ENST00000611816.5	9322	43	79811	-10	833	7	3prime_fragment	FALSE	canonical	3	55	junction_16	58.0785174298657	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCATGTGACTATTTCAA	6172	False	NA	4	True	ATTAAA	-22	NA	31127868	31100109	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_-_31101068_31101179_31101325_31102915_31103067_31105382_31105477_31105589_31105669_31106645_31107254_31107566_31107705_31109396_31109599_31112415_31112544_31113103_31113190_31113276_31113485_31113876_31114060_31114285_31114341_31116235_31116459_31119709_31119867_31121382_31121506_31122919_31123048_31127784
H1_mix_00025298	chr14	-	8930	43	NIC	ENSG00000092148.14	novel	8851	43	NA	NA	0	7	combination_of_known_junctions	FALSE	canonical	3	55	junction_16	60.2309848993864	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCATGTGACTATTTCAA	-9	True	NA	4	True	ATTAAA	-22	NA	31207793	31100109	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_31101068_31101179_31101325_31102915_31103067_31105382_31105477_31105589_31105669_31106645_31107254_31107566_31107705_31109396_31109599_31112415_31112544_31113103_31113190_31113276_31113485_31113876_31114060_31114285_31114341_31116235_31116459_31119709_31119867_31121382_31121506_31122919_31123048_31127784_31128007_31128611_31129308_31133237_31133415_31133508_31133676_31134871_31135196_31135475_31135616_31136530_31136666_31139891_31139998_31141857_31141953_31144110_31144258_31144806_31144942_31148720_31148798_31148896_31149161_31149998_31150222_31156839_31157011_31157164_31157304_31168297_31168473_31169353_31169469_31171860_31171960_31172045_31172123_31173155_31173427_31173524_31173807_31174910_31175139_31178019_31178255_31205796_31205958_31207390
H1_mix_00025299	chr14	-	9494	43	FSM	ENSG00000092148.14	ENST00000399332.6	9445	43	-44	-5	-33	5	multi-exon	FALSE	canonical	3	40	junction_42	59.6986432386461	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCATGTGACTATTTC	322	False	NA	2	True	ATTAAA	-20	NA	31207837	31100111	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_31101068_31101179_31101325_31102915_31103067_31105382_31105477_31105589_31105669_31106645_31107254_31107566_31107705_31109396_31109599_31112415_31112544_31113103_31113190_31113276_31113485_31113876_31114060_31114285_31114341_31116235_31116459_31119709_31119867_31121382_31121506_31122913_31123048_31127784_31128007_31128611_31129449_31133237_31133415_31133508_31133676_31134871_31135196_31135475_31135616_31136530_31136666_31139891_31139998_31141857_31141953_31144110_31144258_31144806_31144942_31148720_31148798_31148896_31149161_31149998_31150222_31156839_31157011_31157164_31157304_31168297_31168473_31169353_31169469_31171860_31171960_31172045_31172123_31173155_31173427_31173524_31173807_31174910_31175139_31178019_31178255_31205796_31205958_31207015
H1_mix_00025300	chr14	-	9088	43	FSM	ENSG00000092148.14	ENST00000553700.5	9080	43	0	-8	0	7	multi-exon	FALSE	canonical	3	87	junction_19	57.3337288390092	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCATGTGACTATTTCAA	-20	True	NA	4	True	ATTAAA	-22	NA	31207804	31100109	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_31101068_31101179_31101325_31102915_31103067_31105382_31105477_31105589_31105669_31106645_31107254_31107566_31107705_31109396_31109599_31112415_31112544_31113103_31113190_31113276_31113485_31113876_31114060_31114285_31114341_31116235_31116459_31119709_31119867_31121382_31121506_31122913_31123048_31127784_31128007_31128611_31129449_31133237_31133415_31133508_31133676_31134871_31135196_31135475_31135616_31136530_31136666_31139891_31139998_31141857_31141953_31144110_31144258_31144806_31144942_31148720_31148798_31148896_31149161_31149998_31150222_31156839_31157011_31157164_31157304_31168297_31168473_31169353_31169469_31171860_31171960_31172045_31172123_31173155_31173427_31173524_31173807_31174910_31175139_31178019_31178255_31205796_31205958_31207390
H1_mix_00025304	chr14	-	7812	36	FSM	ENSG00000129493.15	ENST00000543095.7	7811	36	0	-1	0	1	multi-exon	FALSE	canonical	0	0	junction_35	19.9693642914361	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTATTTTTAAATTATT	-1	True	NA	-1	True	AATAAA	-19	NA	31420550	31291786	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_31293613_31293890_31294105_31295908_31296064_31302294_31302520_31304904_31305178_31306731_31306880_31307892_31308021_31308933_31309183_31312967_31313191_31315769_31315950_31318223_31318293_31321498_31321681_31323564_31323805_31326162_31326343_31337475_31337615_31343895_31344066_31345086_31345277_31347747_31347908_31349788_31349980_31350611_31350718_31358636_31358813_31358893_31359058_31364188_31364299_31371809_31371910_31374815_31374969_31380466_31380579_31383520_31383772_31386419_31386576_31387119_31387376_31388844_31389006_31394051_31394227_31395198_31395349_31398672_31398782_31400300_31400513_31402849_31403050_31420471
H1_mix_00025307	chr14	-	507	3	FSM	ENSG00000129493.15	ENST00000382464.6	507	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	68.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTTCCTGTTGTATTT	50	False	NA	NA	False	ATTAAA	-19	NA	31420531	31400265	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_31400513_31402849_31403050_31420471
H1_mix_00025309	chr14	-	997	4	FSM	ENSG00000203546.7	ENST00000547760.1	749	4	-112	-136	-47	136	multi-exon	FALSE	non_canonical	0	0	junction_1	20.8486610281492	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGTGGGGGTCCTTAT	-10	True	NA	NA	False	AATATA	-20	NA	31457488	31427370	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_31427793_31428143_31428189_31453274_31453345_31457028
H1_mix_00025310	chr14	-	2698	3	FSM	ENSG00000129480.13	ENST00000310850.9	2713	3	18	-3	0	3	multi-exon	FALSE	canonical	3	52	junction_2	8.5	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTGTCTCAAAGTTTCTC	-10	True	NA	-1	True	AATAAA	-23	NA	31457488	31446032	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_31448455_31453274_31453345_31457282
H1_mix_00025312	chr14	-	1411	1	FSM	ENSG00000258655.2	ENST00000553596.2	1848	1	23	414	23	-414	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAGGTAGAAGAGACAT	NA	False	NA	57	True	NA	NA	NA	32076770	32075359	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_32075400_32076800
H1_mix_00025313	chr14	-	224	1	FSM	ENSG00000202337.1	ENST00000365467.1	107	1	0	-117	0	117	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAATCTATGAAGTGGGA	NA	False	NA	3	True	NA	NA	NA	32203269	32203045	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_32203000_32203300
H1_mix_00025314	chr14	-	924	1	FSM	ENSG00000259086.3	ENST00000556746.2	445	1	-2	-477	-2	477	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTAAAAATACCTCCCC	NA	False	NA	NA	False	NA	NA	NA	32272303	32271379	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_32271400_32272300
H1_mix_00025315	chr14	-	553	1	FSM	ENSG00000259045.1	ENST00000554243.1	703	1	150	0	150	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTGCAGGGACATGGATA	150	False	NA	NA	False	NA	NA	NA	32484650	32484097	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_32484100_32484600
H1_mix_00025316	chr14	-	2711	5	FSM	ENSG00000129521.15	ENST00000250457.9	2706	5	0	-5	0	5	multi-exon	FALSE	canonical	3	82	junction_1	8.73212459828649	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTAATGGTTTGATTAAT	-5	True	NA	-5	True	AATAAA	-20	NA	33951074	33924221	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_33925923_33926959_33927034_33929075_33929213_33931095_33931216_33950395
H1_mix_00025318	chr14	-	2810	2	FSM	ENSG00000165389.7	ENST00000298130.5	2662	2	-93	-55	-93	55	multi-exon	FALSE	canonical	3	753	junction_1	0	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTGATGTTGATGGCTG	NA	False	NA	NA	False	NA	NA	NA	34462333	34432732	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_34435305_34462095
H1_mix_00025319	chr14	-	536	3	Genic_Genomic	ENSG00000240463.1	novel	441	1	NA	NA	0	110026	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGAGTGTGGTGGCGCA	41	False	NA	NA	False	NA	NA	NA	34569129	34458662	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr14_-_34458688_34486589_34486623_34568651
H1_mix_00025320	chr14	-	1312	6	FSM	ENSG00000129518.10	ENST00000250454.8	1303	6	0	-9	0	9	multi-exon	FALSE	canonical	3	359	junction_4	44.6031389029965	1830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTTGCTAAGATGTAT	-1	True	NA	1	True	ATTAAA	-29	NA	34539701	34515928	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_34516587_34524696_34524808_34529357_34529476_34533443_34533540_34536093_34536276_34539554
H1_mix_00025321	chr14	-	3399	13	FSM	ENSG00000129515.20	ENST00000396526.7	3398	13	0	-1	0	0	multi-exon	FALSE	canonical	3	692	junction_2	83.4370604441189	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTCTTAAATGTTGTG	67	False	NA	NA	False	ACTAAA	-20	NA	34630109	34561092	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_34563176_34567685_34567772_34567853_34568014_34575755_34575843_34581560_34581601_34586229_34586306_34593044_34593151_34597549_34597646_34603347_34603472_34605595_34605718_34608029_34608141_34609637_34609743_34629906
H1_mix_00025322	chr14	-	3282	14	FSM	ENSG00000129515.20	ENST00000362031.10	3282	14	0	0	0	0	multi-exon	FALSE	canonical	3	617	junction_13	94.2366403194544	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTCTTAAATGTTGTG	-11	True	NA	NA	False	ACTAAA	-20	NA	34630148	34561092	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_34563176_34567685_34567772_34567853_34568014_34575755_34575843_34581560_34581601_34586229_34586306_34593044_34593151_34597549_34597646_34603347_34603472_34605595_34605718_34608029_34608141_34609637_34609743_34629906_34629955_34630110
H1_mix_00025323	chr14	-	1215	13	FSM	ENSG00000129515.20	ENST00000555416.6	1215	13	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_8	307.654387620626	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAGAAATTTGAAAAAATAT	-17	True	NA	NA	False	AATAAA	-39	NA	34630154	34567891	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_34568014_34575755_34575843_34581560_34581601_34586229_34586306_34593044_34593151_34597549_34597646_34603347_34603472_34604134_34604269_34605595_34605718_34608029_34608141_34609637_34609743_34629906_34629955_34630110
H1_mix_00025324	chr14	-	571	1	FSM	ENSG00000240463.1	ENST00000480487.1	441	1	0	-130	0	130	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGACCTGCCTGGGCAA	41	False	NA	75	True	NA	NA	NA	34569129	34568558	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_34568600_34569100
H1_mix_00025326	chr14	-	4374	4	FSM	ENSG00000165410.15	ENST00000298159.11	4306	4	-95	27	-95	-27	multi-exon	FALSE	canonical	3	106	junction_2	16.391054470859	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAAATGTTTTTGTTAAA	-4	True	NA	NA	False	GATAAA	-1	NA	34714688	34709139	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_34712978_34713059_34713137_34713253_34713562_34714537
H1_mix_00025327	chr14	-	1223	4	FSM	ENSG00000165410.15	ENST00000422678.2	1223	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	59.6675977580983	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAATAAAAATTGTGGCAT	-6	True	NA	NA	False	NA	NA	NA	34714577	34712036	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_34712978_34713059_34713137_34713396_34713562_34714537
H1_mix_00025329	chr14	-	5779	26	FSM	ENSG00000198604.11	ENST00000382422.6	5775	26	0	-4	0	3	multi-exon	TRUE	canonical	1	38	junction_16	13.0692922532171	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATTCTCTAATTTTTACA	447	False	NA	NA	False	AATAAA	-23	NA	34874932	34752727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_34753705_34754826_34754915_34758703_34758847_34761756_34762224_34764706_34764934_34765020_34765269_34771510_34771660_34773571_34773727_34774326_34774491_34775918_34776516_34780185_34780311_34783118_34783233_34783761_34783928_34785776_34786002_34786125_34786222_34792774_34792922_34794748_34794888_34795669_34795766_34800223_34800391_34801093_34801194_34802853_34802989_34807450_34807539_34810934_34811037_34826012_34826157_34862043_34862323_34874491
H1_mix_00025330	chr14	-	5732	27	FSM	ENSG00000198604.11	ENST00000360310.6	5729	27	0	-3	0	3	multi-exon	FALSE	canonical	1	38	junction_16	13.5851467793967	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATTCTCTAATTTTTACA	-3	True	NA	NA	False	AATAAA	-23	NA	34875360	34752727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_34753705_34754826_34754915_34758703_34758847_34761756_34762224_34764706_34764934_34765020_34765269_34771510_34771660_34773571_34773727_34774326_34774491_34775918_34776516_34780185_34780311_34783118_34783233_34783761_34783928_34785776_34786002_34786125_34786222_34792774_34792922_34794748_34794888_34795669_34795766_34800223_34800391_34801093_34801194_34802853_34802989_34807450_34807539_34810934_34811037_34826012_34826157_34862043_34862323_34874491_34874663_34875137
H1_mix_00025331	chr14	-	5925	26	FSM	ENSG00000198604.11	ENST00000358716.8	5920	26	-2	-3	-2	3	multi-exon	FALSE	canonical	1	25	junction_14	17.302300425088	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATTCTCTAATTTTTACA	NA	False	NA	NA	False	AATAAA	-23	NA	34875649	34752727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_34753705_34754826_34754915_34758703_34758847_34761756_34762224_34764706_34764934_34765020_34765269_34771510_34771660_34773571_34773727_34774326_34774491_34775918_34776516_34780185_34780311_34783118_34783233_34783761_34783928_34785776_34786002_34792774_34792922_34794748_34794888_34795669_34795766_34800223_34800391_34801093_34801194_34802853_34802989_34807450_34807539_34810934_34811037_34826012_34826157_34862043_34862323_34874491_34874663_34875137
H1_mix_00025332	chr14	-	685	4	FSM	ENSG00000198604.11	ENST00000556314.2	673	4	0	-12	0	12	multi-exon	FALSE	canonical	3	73	junction_2	12.328828005938	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTGATTGCTTTCATTT	NA	False	NA	-28	True	AATAAA	-29	NA	34785974	34780103	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_34780311_34783118_34783233_34783761_34783928_34785776
H1_mix_00025334	chr14	-	948	4	FSM	ENSG00000258704.7	ENST00000686298.1	506	4	3	-445	0	245	multi-exon	FALSE	canonical	3	15	junction_3	17.4547032821147	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTATCATTTCACTAATA	-14	True	NA	NA	False	AAAAAG	-32	NA	34982532	34963462	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_34964041_34969169_34969308_34971941_34972065_34982423
H1_mix_00025335	chr14	-	925	3	FSM	ENSG00000258704.7	ENST00000556705.6	614	3	34	-345	0	345	multi-exon	TRUE	canonical	3	20	junction_2	18	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTAAGATTAAGGATGTA	-14	True	NA	NA	False	NA	NA	NA	34982532	34963362	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_34964041_34969169_34969308_34982423
H1_mix_00025336	chr14	-	1852	14	NNC	ENSG00000092020.11	novel	1511	13	NA	NA	0	7998	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	65.8652919707378	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTTGAAAACCATATCTA	213	False	NA	NA	False	NA	NA	NA	35122313	35077468	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_35077494_35085478_35085779_35087950_35088011_35091069_35091208_35095047_35095185_35096557_35096634_35096708_35096765_35099251_35099385_35107303_35107375_35108138_35108237_35109818_35109932_35110524_35110630_35116609_35116738_35121901
H1_mix_00025337	chr14	-	1516	13	FSM	ENSG00000092020.11	ENST00000261475.10	1511	13	0	-5	0	0	multi-exon	FALSE	canonical	3	197	junction_9	24.8741275670569	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGGTTACTGGAATTT	-1	True	NA	3	True	AATAAA	-31	NA	35121990	35085466	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_35085779_35087950_35088011_35091069_35091208_35095047_35095185_35096557_35096634_35096708_35096765_35099251_35099385_35107303_35107375_35108138_35108237_35109818_35109932_35110524_35110630_35116609_35116738_35121901
H1_mix_00025339	chr14	-	1725	13	FSM	ENSG00000092020.11	ENST00000554222.5	1719	13	0	-6	0	0	multi-exon	FALSE	canonical	3	70	junction_11	65.1342630435182	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGGTTACTGGAATTT	79	False	NA	3	True	AATAAA	-31	NA	35122447	35085466	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_35085779_35087950_35088011_35091069_35091208_35095047_35095185_35096557_35096634_35096708_35096765_35099251_35099385_35107303_35107375_35108138_35108237_35109818_35109932_35110524_35110630_35121901_35122102_35122221
H1_mix_00025340	chr14	-	1887	14	NIC	ENSG00000092020.11	novel	1719	13	NA	NA	9	-2	combination_of_known_junctions	FALSE	canonical	3	72	junction_13	48.4892472677368	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGATATGCCTAGAGAACA	18	True	NA	-24	True	AATAAA	-4	NA	35122508	35085493	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_35085779_35087950_35088011_35091069_35091208_35095047_35095185_35096557_35096634_35096708_35096765_35099251_35099385_35107303_35107375_35108138_35108237_35109818_35109932_35110524_35110630_35116609_35116738_35121901_35122102_35122221
H1_mix_00025341	chr14	-	1846	12	FSM	ENSG00000092020.11	ENST00000557217.5	1846	12	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_11	52.8141916815472	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCTTTAAAGCAAAATCCT	9	True	NA	-66	True	NA	NA	NA	35122517	35085535	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_35085779_35087950_35088011_35091069_35091208_35095047_35095185_35096557_35096634_35096708_35096765_35099251_35099385_35107303_35107375_35108138_35108237_35109818_35109932_35110524_35110630_35121901
H1_mix_00025344	chr14	-	1563	6	FSM	ENSG00000100906.11	ENST00000216797.10	1559	6	0	-4	0	4	multi-exon	FALSE	canonical	3	247	junction_5	34.7252069828245	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCCTGATCATTTTCTTC	1	True	NA	-3	True	ATTAAA	-19	NA	35404749	35401508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_35402061_35402393_35402664_35402770_35402860_35403149_35403361_35403689_35403799_35404417
H1_mix_00025345	chr14	-	337	3	FSM	ENSG00000100906.11	ENST00000556664.1	381	3	44	0	44	0	multi-exon	FALSE	canonical	3	333	junction_1	5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCGGACTGCCCTTCACC	1710	False	NA	NA	False	NA	NA	NA	35403386	35402652	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_35402664_35402770_35402860_35403149
H1_mix_00025348	chr14	-	1595	9	FSM	ENSG00000151332.20	ENST00000318473.11	1586	9	0	-9	0	5	multi-exon	FALSE	canonical	3	77	junction_1	114.655939117867	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACGGTGTGACTTTGATC	-9	True	NA	-25	True	AATAAA	-23	NA	36320627	36298558	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_36299188_36300784_36300824_36308091_36308190_36311572_36311726_36311958_36312025_36314511_36314609_36314690_36314916_36316692_36316813_36320459
H1_mix_00025349	chr14	-	1608	9	FSM	ENSG00000151332.20	ENST00000416007.9	1603	9	0	-5	0	5	multi-exon	FALSE	canonical	3	372	junction_2	29.1719042916296	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACGGTGTGACTTTGATC	-19	True	NA	-25	True	AATAAA	-23	NA	36320637	36298558	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_36299191_36300784_36300824_36308091_36308190_36311572_36311726_36311958_36312025_36314511_36314609_36314690_36314916_36316692_36316813_36320459
H1_mix_00025350	chr14	-	1449	8	FSM	ENSG00000151332.20	ENST00000359527.11	1449	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	142.431652065839	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAATAAACAATAGATCCA	11	True	NA	-56	True	NA	NA	NA	36320607	36298589	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_36299191_36300784_36300824_36311572_36311726_36311958_36312025_36314511_36314609_36314690_36314916_36316692_36316813_36320459
H1_mix_00025353	chr14	-	3893	10	FSM	ENSG00000183032.12	ENST00000331299.6	3893	10	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_8	6.55084576577052	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCCCAGAAAATCAATTGT	208	False	37172622	NA	False	ATTAAA	-14	NA	37172606	36677920	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_36680720_36683827_36683881_36684743_36684926_36711317_36711483_36725569_36725678_36729506_36729567_36734506_36734574_36813917_36814002_36874955_36875005_37172280
H1_mix_00025355	chr14	-	3508	2	FSM	ENSG00000129514.8	ENST00000250448.5	3509	2	0	1	0	-1	multi-exon	FALSE	canonical	3	60	junction_1	0	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGAGACTCATGAACTCTC	3	True	NA	-4	True	AATAAA	-37	NA	37595249	37589552	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_37592712_37594900
H1_mix_00025356	chr14	-	1742	1	FSM	ENSG00000176435.7	ENST00000342213.3	2094	1	178	174	178	-174	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGTATATTGGTTCGAAA	543	False	NA	NA	False	NA	NA	NA	38255915	38254173	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_38254200_38255900
H1_mix_00025357	chr14	-	462	2	Intergenic	novelGene_428	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	13	junction_1	0	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCCCCTTCATTTCACA	NA	False	NA	NA	False	ATTAAA	-21	NA	38542087	38513638	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_-_38514002_38541988
H1_mix_00025358	chr14	-	3843	20	FSM	ENSG00000100934.15	ENST00000307712.11	3843	20	0	0	0	0	multi-exon	FALSE	canonical	3	504	junction_14	56.2769172284906	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGGCTATTTTGAAATC	-40	True	NA	-1	True	AATAAA	-18	NA	39103235	39031918	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_39033329_39039030_39039097_39040731_39040888_39042785_39042873_39045162_39045325_39048651_39048730_39055142_39055297_39061764_39061872_39063323_39063414_39064912_39064994_39067172_39067297_39074414_39074531_39075934_39076094_39085761_39085907_39086928_39087009_39091476_39091714_39092540_39092628_39093186_39093245_39095897_39096140_39103031
H1_mix_00025359	chr14	-	3256	6	FSM	ENSG00000182400.15	ENST00000330149.10	3251	6	0	-5	0	2	multi-exon	FALSE	canonical	3	102	junction_4	10.2878569196893	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCGTGATTTTGTGGTGG	33	True	NA	0	True	AATAAA	-24	NA	39170333	39147808	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_39150382_39151745_39151840_39154210_39154295_39158284_39158403_39159482_39159551_39170014
H1_mix_00025360	chr14	-	3230	5	FSM	ENSG00000182400.15	ENST00000347691.9	3229	5	0	-1	0	0	multi-exon	FALSE	canonical	3	27	junction_2	39.7523584206019	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTCGTGATTTTGTGGT	-27	True	NA	-2	True	AATAAA	-22	NA	39170393	39147810	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_39150382_39151745_39151840_39158284_39158403_39159482_39159551_39170014
H1_mix_00025363	chr14	-	3825	4	FSM	ENSG00000165355.8	ENST00000298097.8	3771	4	-39	-15	-6	15	multi-exon	FALSE	canonical	3	55	junction_2	8.64098759787715	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTAGTATTCTGGTTGT	-27	True	NA	15	True	AATAAA	-31	NA	39432472	39397668	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_39399788_39401175_39401862_39402400_39402512_39431563
H1_mix_00025364	chr14	-	242	1	Intergenic	novelGene_430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTTTGTGATTCTTCA	NA	False	NA	NA	False	NA	NA	NA	41516209	41515967	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_-_41516000_41516200
H1_mix_00025365	chr14	-	482	2	Intergenic	novelGene_431	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACGCGGCTTAGGAGGAAT	NA	False	NA	NA	False	NA	NA	NA	41519363	41518285	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_-_41518448_41519043
H1_mix_00025366	chr14	-	300	1	FSM	ENSG00000259137.1	ENST00000555080.1	552	1	249	3	249	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTCCCAAACGCTTAGTC	NA	False	NA	NA	False	TATAAA	-28	NA	44120512	44120212	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_44120200_44120500
H1_mix_00025367	chr14	-	4384	1	Genic_Genomic	ENSG00000179454.14	novel	NA	NA	NA	NA	32446	21	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTGAACTGAACCAAGCT	NA	False	NA	1	True	AATAAA	-35	NA	44928686	44924302	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr14_-_44924300_44928700
H1_mix_00025368	chr14	-	6543	5	FSM	ENSG00000179454.14	ENST00000396128.9	6522	5	0	-21	0	21	multi-exon	FALSE	canonical	3	23	junction_2	2.27760839478607	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTGAACTGAACCAAGCT	-17	True	NA	1	True	AATAAA	-35	NA	44961947	44924302	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_44929192_44931332_44931542_44934114_44934559_44945029_44945929_44961845
H1_mix_00025370	chr14	-	1023	8	NNC	ENSG00000100442.11	novel	1299	7	NA	NA	0	3968	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1061.11545083464	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGTGCAGTGGCTTACG	-9	True	NA	NA	False	AAAAAG	-1	NA	45134481	45111630	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_45111659_45115902_45116253_45118027_45118126_45120886_45120955_45121484_45121621_45129793_45129902_45130698_45130801_45134348
H1_mix_00025371	chr14	-	1299	7	FSM	ENSG00000100442.11	ENST00000396062.4	1299	7	0	0	0	0	multi-exon	FALSE	canonical	3	2862	junction_2	110.878937985935	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGATGAGTCTTCCGTTTT	-9	True	NA	-4	True	AATAAA	-15	NA	45134481	45115598	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_45116253_45118027_45118126_45120886_45120955_45121484_45121621_45129793_45129902_45130698_45130801_45134348
H1_mix_00025372	chr14	-	4577	17	FSM	ENSG00000129534.14	ENST00000310806.9	4577	17	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_14	35.957440120231	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTCTTGTTTTTTGTT	277	False	45253219	-2	True	AATAAA	-21	NA	45253202	45203189	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_45204213_45204398_45204454_45206082_45206171_45210379_45210529_45217018_45217180_45218281_45218455_45223917_45224747_45226742_45226837_45227662_45227815_45231140_45231299_45232732_45232821_45235813_45235945_45237647_45237722_45242033_45242519_45242760_45242875_45246742_45247378_45253034
H1_mix_00025373	chr14	-	2425	4	FSM	ENSG00000129534.14	ENST00000554093.1	585	4	79	-1919	0	1567	multi-exon	FALSE	canonical	3	19	junction_3	147.563169147619	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCCAACATAGTGAAACCC	NA	False	NA	NA	False	NA	NA	NA	45224045	45208543	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_45210529_45217018_45217180_45218281_45218433_45223917
H1_mix_00025374	chr14	-	371	2	Intergenic	novelGene_433	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCTCAGAGGCCTGAGAA	NA	False	NA	NA	False	NA	NA	NA	47108704	47104213	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_-_47104380_47108499
H1_mix_00025375	chr14	-	371	3	Intergenic	novelGene_434	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_2	764.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCTCAGAGGCCTGAGAA	NA	False	NA	NA	False	NA	NA	NA	47108704	47104213	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_-_47104437_47104468_47104531_47108618
H1_mix_00025376	chr14	-	403	2	Intergenic	novelGene_435	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCTCAGAGGCCTGAGAA	NA	False	NA	NA	False	NA	NA	NA	47108704	47104213	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_-_47104531_47108618
H1_mix_00025377	chr14	-	371	2	Intergenic	novelGene_436	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCTCAGAGGCCTGAGAA	NA	False	NA	NA	False	NA	NA	NA	47108704	47104213	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_-_47104437_47108556
H1_mix_00025380	chr14	-	2526	4	FSM	ENSG00000259129.6	ENST00000557749.5	443	4	29	-2112	29	1	multi-exon	FALSE	canonical	1	1	junction_1	6.34209919681348	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCCTCTCTCCTTCTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	47795063	47764952	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_47767269_47768830_47768911_47789905_47789944_47794971
H1_mix_00025381	chr14	-	7049	6	Fusion	ENSG00000287492.1_ENSG00000289195.1	novel	923	3	NA	NA	-2367	2161	multi-exon	FALSE	canonical	3	124	junction_4	210.548236753481	135	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAGTAGCATGAGGTAAA	NA	False	NA	NA	False	NA	NA	NA	48267976	48231581	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr14_-_48234227_48235430_48235619_48258584_48260263_48260392_48262484_48265560_48265755_48267723
H1_mix_00025382	chr14	-	3421	5	Fusion	ENSG00000287492.1_ENSG00000289195.1	novel	923	3	NA	NA	-2362	216	multi-exon	FALSE	canonical	3	124	junction_3	222.244797464418	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGTTATATGCAATACG	NA	False	NA	-14	True	AATAAA	-16	NA	48267971	48233526	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr14_-_48234227_48235430_48235619_48260392_48262484_48265560_48265755_48267723
H1_mix_00025383	chr14	-	1294	3	Intergenic	novelGene_437	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	3	173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTACATCCCTCTCCATA	NA	False	NA	NA	False	ATTAAA	-23	NA	49550107	49525445	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_-_49526383_49543078_49543177_49549848
H1_mix_00025384	chr14	-	7062	3	FSM	ENSG00000213741.11	ENST00000396020.7	7062	3	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	10575	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTTCTATGTGATGGT	0	True	NA	1	True	AATAAA	-29	NA	49586376	49570983	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_49577854_49585949_49586050_49586284
H1_mix_00025385	chr14	-	295	3	FSM	ENSG00000213741.11	ENST00000245458.11	295	3	0	0	0	0	multi-exon	FALSE	canonical	3	15954	junction_1	2642.5	3556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGTTTATGAGTGTTCT	-4	True	NA	-31	True	AATAAA	-15	NA	49586380	49583576	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_49583676_49585949_49586050_49586284
H1_mix_00025386	chr14	-	499	2	FSM	ENSG00000213741.11	ENST00000557367.2	499	2	0	0	0	0	multi-exon	FALSE	canonical	3	15954	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTCAGTTTATGAGTGTT	507	False	NA	30	True	AATAAA	-13	NA	49586351	49583578	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_49583676_49585949
H1_mix_00025387	chr14	-	488	3	FSM	ENSG00000213741.11	ENST00000557111.5	488	3	0	0	0	0	multi-exon	FALSE	canonical	1	17	junction_2	7968.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTCAGTTTATGAGTGTT	NA	False	NA	30	True	AATAAA	-13	NA	49598690	49583578	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_49583676_49585949_49586050_49598399
H1_mix_00025388	chr14	-	844	2	FSM	ENSG00000213741.11	ENST00000554075.2	844	2	0	0	0	0	multi-exon	FALSE	canonical	3	21239	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCCGGTTCAAGCGATTC	0	True	NA	NA	False	NA	NA	NA	49586376	49585297	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_49586050_49586284
H1_mix_00025389	chr14	-	545	3	NNC	ENSG00000165502.7	novel	676	2	NA	NA	0	9632	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3056	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTAAAGTCATACAAAGTG	-6	True	NA	NA	False	AAAAAG	-2	NA	49620626	49608897	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_49608928_49618690_49619141_49620561
H1_mix_00025390	chr14	-	676	2	FSM	ENSG00000165502.7	ENST00000298289.7	676	2	0	0	0	0	multi-exon	FALSE	canonical	3	6112	junction_1	0	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCTTAGAAGGATCTTTA	-6	True	NA	NA	False	CATAAA	-7	NA	49620626	49618529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_49619141_49620561
H1_mix_00025391	chr14	-	2977	3	FSM	ENSG00000165506.15	ENST00000298292.13	2977	3	0	0	0	0	multi-exon	FALSE	canonical	3	469	junction_1	22	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTTTGTCACACAAAGT	-12	True	NA	-15	True	AATAAA	-20	NA	49635244	49625173	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_49626049_49628011_49628156_49633286
H1_mix_00025392	chr14	-	405	3	FSM	ENSG00000100479.13	ENST00000554851.5	509	3	107	-3	107	3	multi-exon	FALSE	canonical	2	2	junction_1	57	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTGCTTAAATTTGTAT	NA	False	NA	-13	True	AATAAA	-20	NA	49651377	49643551	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_49643671_49650264_49650442_49651268
H1_mix_00025393	chr14	-	1695	19	FSM	ENSG00000100479.13	ENST00000216367.10	1692	19	0	-3	0	3	multi-exon	FALSE	canonical	3	66	junction_14	15.1703292280981	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTGCTTAAATTTGTAT	-3	True	NA	-13	True	AATAAA	-20	NA	49688214	49643551	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_49643671_49647292_49647361_49650264_49650442_49651268_49651378_49653989_49654068_49654154_49654215_49654783_49654839_49655004_49655095_49655670_49655844_49663314_49663388_49664625_49664675_49665106_49665164_49666329_49666414_49669523_49669599_49674122_49674217_49674349_49674428_49679724_49679801_49683592_49683694_49688135
H1_mix_00025394	chr14	-	1581	17	FSM	ENSG00000100479.13	ENST00000554396.5	1581	17	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_12	15.3132652869987	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGATTATTGTCGAAGT	1	True	NA	NA	False	AATATA	-6	NA	49688210	49650187	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_49650442_49651268_49651378_49653989_49654068_49654154_49654215_49654783_49654839_49655004_49655095_49655670_49655844_49663314_49663388_49664625_49664675_49665106_49665164_49666329_49666414_49669523_49669599_49674122_49674217_49674349_49674428_49679724_49679801_49683592_49683694_49688135
H1_mix_00025395	chr14	-	5819	33	FSM	ENSG00000165525.18	ENST00000298310.10	5819	33	0	0	0	0	multi-exon	TRUE	canonical	3	147	junction_19	22.9414804107647	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAGTAGTATATGCCTTC	17	True	NA	NA	False	AATAAA	-13	NA	49852788	49782082	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_49784714_49784924_49785005_49785091_49785136_49785219_49785321_49786717_49786751_49789145_49789344_49789495_49789574_49795790_49795945_49799474_49799525_49799635_49799679_49800419_49800697_49802452_49802574_49802668_49802728_49803236_49803295_49806020_49806134_49813987_49814051_49814753_49814858_49825866_49825956_49828290_49828355_49828615_49828808_49829053_49829263_49829348_49829427_49831298_49831362_49832050_49832127_49832206_49832278_49833422_49833497_49834362_49834450_49838138_49838207_49840717_49840867_49846139_49846266_49851562_49851666_49851806_49851876_49852694
H1_mix_00025397	chr14	-	299	1	FSM	ENSG00000274012.1	ENST00000490232.3	300	1	-1	2	-1	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCCCCCTCCCTCATT	-6	True	NA	-2	True	NA	NA	NA	49862850	49862551	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_49862600_49862800
H1_mix_00025399	chr14	-	1830	5	FSM	ENSG00000100483.14	ENST00000569518.5	1827	5	0	-3	0	3	multi-exon	FALSE	canonical	2	4	junction_1	30.4302481094059	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTGAATTTCAGAAATACC	91	False	NA	-5	True	AATAAA	-23	NA	50116477	50108628	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50109714_50113369_50113513_50114284_50114405_50115838_50115912_50116068
H1_mix_00025400	chr14	-	1862	5	FSM	ENSG00000100483.14	ENST00000484763.1	1849	5	0	-13	0	3	multi-exon	FALSE	canonical	3	37	junction_4	16.2076370887307	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTGAATTTCAGAAATACC	10	True	NA	-5	True	AATAAA	-23	NA	50116558	50108628	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50109714_50112614_50112720_50114284_50114405_50115838_50115912_50116079
H1_mix_00025404	chr14	-	3447	12	ISM	ENSG00000100485.12	ENST00000216373.10	5508	23	10	38764	10	-2	5prime_fragment	FALSE	canonical	3	30	junction_7	4.94264626147934	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCTGTGATGCATTTGTA	402	False	NA	NA	False	AATAAA	-18	NA	50231568	50155893	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_-_50157122_50158564_50158647_50159430_50160087_50161481_50161610_50174453_50174553_50180571_50180683_50182462_50182607_50188496_50188701_50199690_50199856_50200952_50201085_50204283_50204410_50231196
H1_mix_00025406	chr14	-	1958	11	FSM	ENSG00000087299.12	ENST00000421284.7	1958	11	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	12.8514590611339	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTTAATTTTGAAGAGT	-4	True	NA	NA	False	AATACA	-18	NA	50312229	50245650	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50246121_50247040_50247254_50265357_50265490_50267752_50267911_50269162_50269331_50278519_50278555_50283870_50284034_50294114_50294247_50302016_50302169_50302901_50303018_50312010
H1_mix_00025407	chr14	-	6618	1	NIC	ENSG00000100490.10	novel	5402	10	NA	NA	4122	1822	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGGCCTTGATTCAAATGA	9370	False	NA	NA	False	NA	NA	NA	50334907	50328289	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_50328300_50334900
H1_mix_00025408	chr14	-	286	2	FSM	ENSG00000100490.10	ENST00000529347.1	673	2	387	0	268	0	multi-exon	FALSE	canonical	3	15	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGGTAAGTGGTGTTTT	2055	False	NA	NA	False	NA	NA	NA	50342222	50341037	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50341233_50342131
H1_mix_00025409	chr14	-	4418	32	NNC	ENSG00000012983.12	novel	4354	33	NA	NA	-66	26	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	44.2293709299782	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTGTGGCTGTTTAT	11	False	NA	-2	True	TATAAA	-41	NA	50532685	50418474	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_50420107_50423120_50423177_50425906_50425978_50428661_50428755_50429191_50429261_50434393_50434572_50434961_50435066_50437475_50437535_50437893_50438011_50440011_50440074_50440361_50440442_50442731_50442817_50443728_50443771_50443938_50444037_50445040_50445195_50446078_50446122_50447413_50447482_50448773_50448833_50456515_50456595_50462664_50462782_50464051_50464134_50466582_50466646_50468650_50468783_50475076_50475150_50476127_50476171_50476258_50476307_50482360_50482417_50485577_50485643_50486103_50486195_50504799_50504858_50531941_50532159_50532461
H1_mix_00025411	chr14	-	4308	32	NIC	ENSG00000012983.12	novel	4270	33	NA	NA	-9	12	combination_of_known_splicesites	FALSE	canonical	3	38	junction_31	42.7046824873755	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATATGATTTCAGTAAGT	-31	True	NA	-16	True	TATAAA	-27	NA	50532578	50418488	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_50420107_50423120_50423177_50425906_50425978_50428661_50428755_50429191_50429261_50434393_50434572_50434961_50435066_50437475_50437535_50437893_50438009_50440012_50440074_50440361_50440442_50442731_50442817_50443728_50443771_50443938_50444037_50445040_50445195_50446078_50446122_50447413_50447482_50448773_50448833_50456515_50456595_50462664_50462782_50464051_50464134_50466582_50466646_50468650_50468783_50475076_50475150_50476127_50476171_50476258_50476307_50482360_50482417_50485577_50485643_50486103_50486195_50504799_50504858_50531941_50532159_50532447
H1_mix_00025414	chr14	-	323	2	FSM	ENSG00000012983.12	ENST00000554066.1	595	2	271	1	271	-1	multi-exon	FALSE	canonical	3	209	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCCCATTTTTATAGTTG	NA	False	NA	NA	False	NA	NA	NA	50504857	50485929	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50486195_50504799
H1_mix_00025416	chr14	-	668	1	FSM	ENSG00000269906.1	ENST00000602954.1	668	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGTTTTCAGATTCAAGTA	5716	False	NA	-1	True	AATAAA	-17	NA	50663178	50662510	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50662500_50663200
H1_mix_00025417	chr14	-	870	1	FSM	ENSG00000151748.15	ENST00000602664.1	870	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTATGTGTCTAGCGTT	3769	False	NA	NA	False	NA	NA	NA	50665125	50664255	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50664300_50665100
H1_mix_00025418	chr14	-	10325	31	FSM	ENSG00000100503.26	ENST00000530997.7	10334	31	0	9	0	-9	multi-exon	FALSE	canonical	3	12	junction_29	7.73476998149697	3883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATCATTGGTCTTTAG	-18	True	NA	-8	True	AATAAA	-10	NA	50831162	50719771	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50723673_50725952_50726067_50729522_50729724_50735515_50735618_50738139_50738287_50739307_50739488_50741581_50741729_50743415_50743530_50744242_50744366_50747991_50748106_50752517_50752734_50754562_50754633_50754741_50754868_50756491_50758631_50759856_50760360_50761789_50761912_50763825_50763965_50766306_50766397_50766779_50766891_50770387_50770563_50770851_50770993_50771331_50771469_50772300_50772469_50772948_50773096_50776948_50777140_50778764_50778805_50792711_50792882_50806736_50806819_50821873_50822078_50830463_50830518_50831005
H1_mix_00025420	chr14	-	6509	30	FSM	ENSG00000100503.26	ENST00000382041.7	6496	30	0	-13	0	0	multi-exon	FALSE	canonical	3	12	junction_28	7.64615809739873	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGTAAGAACTTAGGATT	23	True	NA	NA	False	AATAAA	-20	NA	50831121	50725826	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50726067_50729522_50729724_50735515_50735618_50738139_50738287_50739307_50739488_50741581_50741729_50743415_50743530_50744242_50744366_50747991_50748106_50752517_50752734_50754562_50754633_50754741_50754868_50756491_50758631_50759856_50760360_50761789_50761912_50763825_50763965_50766306_50766397_50766779_50766891_50770387_50770563_50770851_50770993_50771331_50771469_50772300_50772469_50772948_50773096_50776948_50777140_50778764_50778805_50792711_50792882_50806736_50806819_50821873_50822078_50830463_50830518_50831005
H1_mix_00025421	chr14	-	6743	29	FSM	ENSG00000100503.26	ENST00000453196.6	6858	29	116	-1	84	1	multi-exon	FALSE	canonical	2	8	junction_1	8.23034145149296	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGACTGCCTTTGTTTTTC	1	True	NA	-1	True	AATAAA	-15	NA	50830590	50727234	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50727752_50729522_50729724_50735515_50735618_50738139_50738287_50739307_50739488_50741581_50741729_50743415_50743530_50744242_50744366_50747991_50748106_50752517_50752734_50754562_50754633_50754741_50754868_50756491_50758631_50759856_50760360_50761789_50761912_50763825_50763965_50766306_50766397_50766779_50766891_50770387_50770563_50770851_50770993_50771331_50771469_50772300_50772469_50772948_50773096_50776948_50777140_50778764_50778805_50792711_50792882_50806736_50806819_50821873_50822078_50830463
H1_mix_00025422	chr14	-	1418	12	FSM	ENSG00000100503.26	ENST00000453401.6	1418	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	10.1003232089681	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAACTCCGAAAAGAGAGAG	23	True	NA	NA	False	NA	NA	NA	50831121	50770517	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50770563_50770851_50770993_50771331_50771469_50772300_50772469_50772948_50773096_50776948_50777140_50778764_50778805_50792711_50792882_50806736_50806819_50821873_50822001_50830463_50830518_50831005
H1_mix_00025424	chr14	-	2799	20	FSM	ENSG00000100504.17	ENST00000216392.8	2799	20	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_13	35.9477922453246	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAGTGCCAAAACTTATT	0	True	NA	-17	True	AATAAA	-21	NA	50944483	50905216	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50905557_50908270_50908338_50908820_50908956_50909894_50910103_50911729_50911872_50911977_50912037_50912155_50912304_50913028_50913131_50914700_50914816_50915335_50915500_50915824_50915972_50916641_50916735_50916961_50917106_50920540_50920624_50920955_50921068_50923968_50924101_50931672_50931777_50935106_50935186_50937735_50937838_50944160
H1_mix_00025425	chr14	-	681	4	FSM	ENSG00000100504.17	ENST00000532107.2	681	4	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_3	30.6267856622271	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAACAAAAACAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	50911871	50908141	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50908338_50908820_50908956_50909894_50910103_50911729
H1_mix_00025426	chr14	-	746	3	FSM	ENSG00000100504.17	ENST00000553872.1	746	3	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	11	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTGGCTCCACCCGTGG	2158	False	NA	NA	False	NA	NA	NA	50921528	50917015	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50917106_50920540_50920624_50920955
H1_mix_00025427	chr14	-	1459	5	FSM	ENSG00000100504.17	ENST00000530336.2	1459	5	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_2	19.6516538744198	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTACACTGTGGGTCCCA	13	False	NA	15	True	AATAAA	-43	NA	50944470	50923236	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50924101_50931672_50931777_50935106_50935186_50937735_50937838_50944160
H1_mix_00025428	chr14	-	5280	10	FSM	ENSG00000100505.14	ENST00000298355.7	5284	10	0	4	0	0	multi-exon	FALSE	canonical	3	12	junction_1	4.81766297526196	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATGTCTCTAGAATTTC	27	False	NA	NA	False	AATAAA	-18	NA	51096061	50975265	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50977354_50979386_50979550_50981799_50982104_50998049_50998189_51000682_51000841_51009079_51009234_51010383_51010495_51022834_51022958_51025264_51025361_51094117
H1_mix_00025429	chr14	-	3749	7	FSM	ENSG00000100505.14	ENST00000360392.4	3726	7	0	-23	0	23	multi-exon	FALSE	canonical	3	19	junction_1	3.19722101554181	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTCATTCTAATACATTC	25	True	NA	25	True	NA	NA	NA	51095076	50996040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50998189_51000682_51000841_51009079_51009234_51010383_51010495_51022834_51022958_51025264_51025361_51094117
H1_mix_00025430	chr14	-	4870	22	FSM	ENSG00000087303.19	ENST00000216286.10	4870	22	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_18	8.63810048826427	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATGACTTAAGGATCTAT	17	True	NA	-6	True	AATAAA	-15	NA	52069059	52004808	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_52005497_52005736_52005850_52006536_52006661_52007809_52007968_52010875_52011048_52011553_52011684_52014286_52014457_52015053_52015276_52019060_52019295_52020058_52020179_52027200_52027345_52028721_52028851_52029546_52029691_52038746_52038978_52040650_52040852_52042104_52042351_52042781_52042932_52053578_52053939_52054019_52054322_52060123_52060357_52067857_52068164_52068766
H1_mix_00025432	chr14	-	798	3	FSM	ENSG00000087303.19	ENST00000553297.1	798	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	3.5	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATACTACTGATGGAATG	NA	False	NA	NA	False	NA	NA	NA	52012021	52007809	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_52007968_52010875_52011048_52011553
H1_mix_00025433	chr14	-	4557	21	FSM	ENSG00000087301.9	ENST00000281741.9	4557	21	0	0	0	0	multi-exon	TRUE	canonical	3	108	junction_16	14.4681546853771	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCACAAGCCTCCTTTAG	17	True	NA	-14	True	AATAAA	-20	NA	52552505	52430595	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_52432588_52439203_52439395_52440563_52440725_52455323_52455463_52457089_52457175_52470036_52470174_52470511_52470681_52482229_52482290_52482821_52482966_52488362_52488487_52490390_52490452_52490838_52491006_52511239_52511391_52514879_52514971_52519171_52519294_52536718_52536794_52537598_52537673_52542370_52542454_52543397_52543631_52544263_52544372_52552315
H1_mix_00025434	chr14	-	5526	16	FSM	ENSG00000197930.13	ENST00000395686.8	5139	16	-387	0	-45	0	multi-exon	FALSE	canonical	3	255	junction_4	34.8950171546343	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGGTGTGGTTTTTGGT	-23	True	NA	0	True	AATAAA	-18	NA	52695945	52639914	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_52643631_52646153_52646288_52646374_52646462_52652238_52652309_52653068_52653316_52657916_52658010_52658123_52658151_52661292_52661305_52663800_52663848_52666374_52666496_52671629_52671704_52671794_52671872_52678433_52678473_52682324_52682409_52683787_52683908_52695367
H1_mix_00025436	chr14	-	1046	6	FSM	ENSG00000197930.13	ENST00000556358.5	951	6	-35	-60	-35	0	multi-exon	FALSE	canonical	3	255	junction_3	41.6490095920659	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACAAGAAATAGTATCATT	NA	False	NA	NA	False	NA	NA	NA	52658576	52646191	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_52646288_52646374_52646462_52652238_52652309_52653068_52653316_52657916_52658010_52658123
H1_mix_00025440	chr14	-	3287	17	NNC	ENSG00000073712.15	novel	3247	16	NA	NA	0	11188	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	138.81461051975	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTAGCCAGGTATGGTCG	247	False	NA	NA	False	NA	NA	NA	52950992	52846079	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_52846116_52857270_52858551_52859572_52859715_52860340_52860466_52861013_52861035_52864400_52864623_52864746_52864854_52872798_52872924_52874176_52874227_52875222_52875358_52878581_52878690_52881035_52881139_52881243_52881470_52893292_52893428_52919122_52919357_52950411_52950578_52950920
H1_mix_00025441	chr14	-	2385	3	FSM	ENSG00000073712.15	ENST00000555546.5	2384	3	0	-1	0	0	multi-exon	FALSE	canonical	3	588	junction_1	27.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTTTGTACTTGTTTT	3275	False	NA	-5	True	AATAAA	-21	NA	52861303	52857270	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_52858551_52859572_52859715_52860340
H1_mix_00025442	chr14	-	3250	16	FSM	ENSG00000073712.15	ENST00000343279.8	3247	16	0	-3	0	0	multi-exon	FALSE	canonical	3	458	junction_13	52.3949106943286	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATTTTTGTACTTGTTT	247	False	NA	-6	True	AATAAA	-20	NA	52950992	52857271	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_52858551_52859572_52859715_52860340_52860466_52861013_52861035_52864400_52864623_52864746_52864854_52872798_52872924_52874176_52874227_52875222_52875358_52878581_52878690_52881035_52881139_52881243_52881470_52893292_52893428_52919122_52919357_52950411_52950578_52950920
H1_mix_00025443	chr14	-	3620	15	FSM	ENSG00000073712.15	ENST00000553373.5	2064	15	-452	-1104	-2	0	multi-exon	FALSE	canonical	3	458	junction_13	53.1610951807459	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATTTTTGTACTTGTT	33	True	NA	-7	True	AATAAA	-19	NA	52951020	52857272	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_52858551_52859572_52859715_52860340_52860466_52861013_52861035_52864400_52864623_52864746_52864854_52872798_52872924_52874176_52874227_52875222_52875358_52878581_52878690_52881035_52881139_52881243_52881470_52893292_52893428_52919122_52919357_52950411
H1_mix_00025444	chr14	-	3287	15	FSM	ENSG00000073712.15	ENST00000341590.8	3286	15	0	-1	0	0	multi-exon	FALSE	canonical	3	98	junction_3	124.994203947256	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATTTTTGTACTTGTTT	3	True	NA	-6	True	AATAAA	-20	NA	52951050	52857271	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_52858551_52859572_52859715_52860340_52860466_52864400_52864623_52864746_52864854_52872798_52872924_52874176_52874227_52875222_52875358_52878581_52878690_52881035_52881139_52881243_52881470_52893292_52893428_52919122_52919357_52950411_52950578_52950920
H1_mix_00025445	chr14	-	12956	13	FSM	ENSG00000100523.16	ENST00000673822.2	12941	13	0	-15	0	5	multi-exon	TRUE	canonical	3	21	junction_2	15.2704780540755	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCACTGGTTTCATTTTGC	-73	True	NA	NA	False	ATTAAA	-30	NA	53153323	53036739	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_53046950_53051843_53051928_53054437_53054630_53055659_53055913_53058476_53058627_53061125_53061202_53062942_53063206_53072596_53072704_53073740_53073848_53091784_53091933_53093315_53093445_53103682_53103857_53152260
H1_mix_00025447	chr14	-	5603	12	FSM	ENSG00000100523.16	ENST00000357758.3	5603	12	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	9.97103242414274	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTGTACATGCTATGA	-32	True	NA	-1	True	ATTAAA	-13	NA	53153282	53043967	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_53046950_53054437_53054630_53055659_53055913_53058476_53058627_53061125_53061202_53062942_53063206_53072596_53072704_53073740_53073848_53091784_53091933_53093315_53093445_53103682_53103857_53152260
H1_mix_00025448	chr14	-	2543	4	FSM	ENSG00000100523.16	ENST00000555400.1	2722	4	123	56	123	-56	multi-exon	FALSE	canonical	3	46	junction_3	3.09120616516523	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGGCTATATCGTGCA	NA	False	NA	NA	False	NA	NA	NA	53061201	53052565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_53054630_53055659_53055913_53058476_53058627_53061125
H1_mix_00025450	chr14	-	1710	3	FSM	ENSG00000125378.16	ENST00000558984.1	1705	3	0	-5	0	0	multi-exon	FALSE	canonical	3	21	junction_2	10	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGATTTTTTTTTTCTCC	5314	False	NA	-2	True	AATAAA	-25	NA	53953455	53949735	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_53950889_53951852_53952230_53953275
H1_mix_00025451	chr14	-	1931	4	FSM	ENSG00000125378.16	ENST00000245451.9	1931	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	10.4986771653491	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGATTTTTTTTTTCTCC	-1	True	NA	-2	True	AATAAA	-25	NA	53956825	53949735	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_53950889_53951852_53952230_53953275_53953401_53956549
H1_mix_00025452	chr14	-	1755	4	FSM	ENSG00000125378.16	ENST00000559087.5	1708	4	-47	0	-33	0	multi-exon	FALSE	canonical	3	15	junction_3	11.115554667022	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGATTTTTTTTTTCTCC	1911	False	NA	-2	True	AATAAA	-25	NA	53956858	53949735	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_53950889_53951852_53952230_53953275_53953401_53956758
H1_mix_00025454	chr14	-	1041	1	FSM	ENSG00000224004.2	ENST00000441945.2	895	1	22	-168	22	168	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATAAATATCACTTATCT	NA	False	NA	NA	False	AATAAA	-10	NA	53991973	53990932	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_53990900_53992000
H1_mix_00025455	chr14	-	4757	5	FSM	ENSG00000100528.12	ENST00000216416.9	4735	5	0	-22	0	22	multi-exon	FALSE	canonical	3	658	junction_1	42.1040378111174	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGAGTCTGTGTGTTAA	-14	True	NA	2	True	AATAAA	-39	NA	54441374	54423538	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_54427842_54430260_54430405_54432107_54432221_54436368_54436438_54441246
H1_mix_00025456	chr14	-	856	4	FSM	ENSG00000100528.12	ENST00000557659.5	856	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	327.667853507515	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGATGATTATATATGGATA	-16	True	NA	-74	True	NA	NA	NA	54441376	54427328	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_54427842_54430260_54430405_54436368_54436438_54441246
H1_mix_00025457	chr14	-	4086	7	FSM	ENSG00000197045.13	ENST00000358056.8	4085	7	0	-1	0	0	multi-exon	FALSE	canonical	0	0	junction_3	398.317468303306	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGCTTTTCTTTTTTTA	-16	True	NA	-23	True	AATAAA	-19	NA	54488980	54474483	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_54478160_54479785_54479860_54480873_54480957_54481408_54481459_54482152_54482203_54483670_54483768_54488924
H1_mix_00025459	chr14	-	379	4	FSM	ENSG00000197045.13	ENST00000553566.5	391	4	12	0	12	0	multi-exon	FALSE	canonical	3	59	junction_3	417.19087025272	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCTTTAAAAGATTTATTT	173	False	NA	NA	False	NA	NA	NA	54488849	54481394	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_54481459_54482152_54482203_54483670_54483768_54488681
H1_mix_00025461	chr14	-	2958	6	FSM	ENSG00000131979.20	ENST00000254299.8	2901	6	0	-57	0	48	multi-exon	FALSE	canonical	3	38	junction_1	2.03960780543711	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTGGCTGTATTCTGT	13	False	NA	44	True	TATAAA	-17	NA	54902811	54841959	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_54844144_54845767_54845853_54847098_54847131_54859680_54859737_54865326_54865437_54902320
H1_mix_00025462	chr14	-	1980	7	FSM	ENSG00000131979.20	ENST00000395514.5	1977	7	0	-3	0	3	multi-exon	FALSE	canonical	2	2	junction_1	14.3575377028545	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTTCTTTTTCAACCAC	0	True	NA	-1	True	ATTAAA	-26	NA	54902824	54842004	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_54843055_54844000_54844144_54845767_54845853_54847098_54847131_54859680_54859737_54865326_54865437_54902320
H1_mix_00025463	chr14	-	6019	26	FSM	ENSG00000198554.12	ENST00000360586.8	6019	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	108.420485149256	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACAATGCCATAATTACTC	-24	True	NA	-16	True	AATAAA	-18	NA	55027099	54938948	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_54941691_54944331_54944471_54955560_54955695_54957033_54957205_54957591_54957636_54962497_54962552_54962737_54962854_54962951_54963173_54966474_54966607_54967279_54967395_54981539_54981697_54984722_54984861_54987145_54987388_54989027_54989213_54991212_54991401_54995602_54995814_55000502_55000645_55000885_55000993_55002092_55002186_55007279_55007376_55008315_55008367_55008607_55008720_55010308_55010461_55013484_55013597_55026710_55026804_55027027
H1_mix_00025464	chr14	-	2365	14	FSM	ENSG00000198554.12	ENST00000567693.1	2348	14	0	-17	0	0	multi-exon	FALSE	canonical	0	0	junction_11	188.72095175983	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTTCTAGGGGTTTGGT	NA	False	NA	-18	True	ATTAAA	-29	NA	54991382	54941158	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_54941691_54944331_54944471_54955560_54955695_54957033_54957205_54957591_54957636_54962497_54962552_54962737_54962854_54962951_54963173_54966474_54966607_54967279_54967395_54981539_54981697_54984722_54984861_54987145_54987388_54991212
H1_mix_00025465	chr14	-	3722	25	FSM	ENSG00000198554.12	ENST00000420358.2	3722	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	138.385532320238	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTTCTAGGGGTTTGGT	-30	True	NA	-18	True	ATTAAA	-29	NA	55027105	54941158	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_54941691_54944331_54944471_54955560_54955695_54957033_54957205_54957591_54957636_54962497_54962552_54962737_54962854_54962951_54963173_54966474_54966607_54967279_54967395_54981539_54981697_54984722_54984861_54987145_54987388_54989027_54989213_54991212_54991401_54995602_54995814_55000502_55000645_55000885_55000993_55002092_55002186_55007279_55007376_55008315_55008367_55008607_55008720_55010308_55010461_55013484_55013597_55027027
H1_mix_00025467	chr14	-	2954	20	FSM	ENSG00000126787.13	ENST00000395425.6	2954	20	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_2	324.359133747501	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGCTTAAGGCTAAGTA	24	True	NA	12	True	AATAAA	-36	NA	55191544	55148111	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_55148474_55148593_55148685_55150798_55150849_55151694_55151942_55152589_55152648_55154616_55154807_55158521_55158742_55162970_55163076_55169398_55169560_55170701_55170788_55175345_55175473_55175893_55176019_55177061_55177337_55179628_55179700_55180655_55180779_55181212_55181298_55182369_55182433_55183559_55183754_55188941_55189181_55191462
H1_mix_00025468	chr14	-	2881	19	FSM	ENSG00000126787.13	ENST00000247191.7	2881	19	0	0	0	0	multi-exon	FALSE	canonical	3	963	junction_6	116.728502131555	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCCTCTCTTGTTTAAA	-17	True	NA	-11	True	AATAAA	-13	NA	55191585	55148134	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_55148474_55150798_55150849_55151694_55151942_55152589_55152648_55154616_55154807_55158521_55158742_55162970_55163076_55169398_55169560_55170701_55170788_55175345_55175473_55175893_55176019_55177061_55177337_55179628_55179700_55180655_55180779_55181212_55181298_55182369_55182433_55183559_55183754_55188941_55189181_55191462
H1_mix_00025469	chr14	-	823	3	FSM	ENSG00000126787.13	ENST00000554007.1	823	3	0	0	0	0	multi-exon	FALSE	canonical	3	1229	junction_2	53	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCTCATGTTAATTTATA	NA	False	NA	NA	False	NA	NA	NA	55152644	55150327	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_55150849_55151694_55151942_55152589
H1_mix_00025472	chr14	-	4690	7	FSM	ENSG00000126775.9	ENST00000558189.1	4689	7	0	-1	0	0	multi-exon	FALSE	canonical	3	41	junction_2	9.96242942258564	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTCATGTGTATGTCT	NA	False	NA	-5	True	AATAAA	-14	NA	55391302	55366390	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_55369926_55377818_55377905_55377983_55378075_55380572_55380691_55381961_55382192_55385858_55386097_55390910
H1_mix_00025475	chr14	-	415	3	FSM	ENSG00000186615.12	ENST00000663686.1	415	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	10	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGCCACTCATTGCGTG	NA	False	NA	-8	True	ATTAAA	-14	NA	55580888	55577139	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_55577380_55578605_55578738_55580845
H1_mix_00025476	chr14	-	3057	5	FSM	ENSG00000165588.19	ENST00000339475.10	2956	5	0	-101	0	101	multi-exon	FALSE	canonical	3	57	junction_4	441.887711981223	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCAATAGTTTGCAACCA	-1	True	NA	98	True	AGTAAA	-20	NA	56810448	56799803	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_56802356_56804187_56804340_56805359_56805576_56810158_56810223_56810375
H1_mix_00025477	chr14	-	3112	5	FSM	ENSG00000165588.19	ENST00000672264.2	3011	5	0	-101	0	101	multi-exon	FALSE	canonical	3	57	junction_4	400.064604157878	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCAATAGTTTGCAACCA	-7	True	NA	98	True	AGTAAA	-20	NA	56810479	56799803	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_56802356_56804187_56804364_56805359_56805576_56810158_56810223_56810375
H1_mix_00025478	chr14	-	2109	3	FSM	ENSG00000165588.19	ENST00000408990.8	2109	3	0	0	0	0	multi-exon	FALSE	canonical	3	863	junction_2	77	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGGTCCAGTTTAATTT	-5	True	NA	-15	True	ATTAAA	-16	NA	56805667	56800706	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_56802356_56804187_56804340_56805359
H1_mix_00025479	chr14	-	2240	4	FSM	ENSG00000165588.19	ENST00000673481.1	2240	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_3	425.090055818241	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTATAATTATATTAAAATG	0	True	NA	5	True	CATAAA	-27	NA	56810389	56800738	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_56802356_56804187_56804364_56805359_56805576_56810158
H1_mix_00025482	chr14	-	2632	17	FSM	ENSG00000070367.16	ENST00000340918.11	2632	17	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_14	121.061709470831	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGCATCAATTGTTAATC	-34	True	NA	NA	False	AATACA	-41	NA	57268899	57208159	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_57208798_57209566_57209783_57209952_57210062_57217981_57218069_57219321_57219443_57222307_57222417_57229733_57229882_57231505_57231716_57232666_57232750_57233742_57233884_57233987_57234033_57235710_57235821_57237337_57237367_57239594_57239660_57246710_57246859_57247617_57247713_57268621
H1_mix_00025483	chr14	-	738	5	FSM	ENSG00000070367.16	ENST00000554598.5	772	5	0	34	0	-34	multi-exon	FALSE	canonical	3	417	junction_1	50.0949099210688	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGGTATAATTTATAAAATA	42	True	NA	NA	False	NA	NA	NA	57268823	57239561	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_57239660_57244164_57244360_57246710_57246859_57247617_57247713_57268621
H1_mix_00025484	chr14	-	993	1	FSM	ENSG00000259969.1	ENST00000563647.1	981	1	0	-12	0	12	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGTTCCTTGTTTAAAG	NA	False	NA	-35	True	ATTAAA	-33	NA	57994525	57993532	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_57993500_57994500
H1_mix_00025485	chr14	-	6605	8	FSM	ENSG00000139971.15	ENST00000267485.7	6495	8	30	-140	0	140	multi-exon	FALSE	canonical	3	51	junction_4	11.7438650940369	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTCTCAAAAACAAAAACAA	16	True	NA	NA	False	NA	NA	NA	58152183	58000620	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_58004805_58005047_58005183_58012118_58012151_58096723_58096982_58131511_58131722_58133089_58133342_58137989_58139415_58152074
H1_mix_00025486	chr14	-	2621	5	FSM	ENSG00000139971.15	ENST00000334342.5	2380	5	-20	-221	10	213	multi-exon	FALSE	canonical	3	13	junction_1	30.62984655528	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCCCAGTGTCTGTTGTT	-4	True	NA	NA	False	NA	NA	NA	58152203	58115902	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_58116508_58131511_58131722_58133089_58133342_58137989_58139415_58152074
H1_mix_00025487	chr14	-	2299	4	ISM	ENSG00000139971.15	ENST00000334342.5	2380	5	0	15085	0	-2	5prime_fragment	FALSE	canonical	3	71	junction_2	7.78888096369861	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATACTAATTCATTTTCATA	16	True	NA	-11	True	AATAAA	-19	NA	58152183	58131208	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_-_58131722_58133089_58133342_58137989_58139415_58152074
H1_mix_00025488	chr14	-	2352	2	FSM	ENSG00000257621.9	ENST00000667365.1	2335	2	0	-17	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTGGGATTTATTG	210	False	NA	-12	True	ATTAAA	-19	NA	58273801	58265364	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_58267394_58273478
H1_mix_00025489	chr14	-	2257	4	FSM	ENSG00000257621.9	ENST00000556002.5	1039	4	18	-1236	0	-7	multi-exon	FALSE	canonical	3	53	junction_2	34.6538437823121	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGATTTTTCTCTGGGA	41	False	NA	-19	True	ATTAAA	-12	NA	58298084	58265371	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_58267394_58273978_58274011_58291634_58291708_58297954
H1_mix_00025490	chr14	-	2475	5	FSM	ENSG00000257621.9	ENST00000554360.5	2475	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	39.9343210784909	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTGGGATTTATTG	-4	True	NA	-12	True	ATTAAA	-19	NA	58298129	58265364	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_58267394_58273978_58274011_58285590_58285757_58291634_58291708_58297954
H1_mix_00025491	chr14	-	1994	2	FSM	ENSG00000257621.9	ENST00000654187.2	2089	2	0	95	0	-78	multi-exon	FALSE	canonical	3	63	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCAGTGGGCCATAATTT	NA	False	NA	-22	True	AATAAA	-14	NA	58274038	58265459	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_58267394_58273978
H1_mix_00025493	chr14	-	604	3	FSM	ENSG00000257621.9	ENST00000556400.5	604	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	39	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGAGGCAGGAGACTC	10	True	NA	NA	False	NA	NA	NA	58298115	58273640	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_58274011_58291634_58291708_58297954
H1_mix_00025494	chr14	-	2360	4	FSM	ENSG00000257621.9	ENST00000557660.5	2360	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	18.8030730348939	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTACCAGCTTTTTTT	5	True	NA	-23	True	AATAAA	-19	NA	58298120	58273935	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_58274011_58291634_58291708_58293765_58295812_58297954
H1_mix_00025496	chr14	-	878	5	ISM	ENSG00000100575.14	ENST00000395159.7	1252	6	370	153	0	0	3prime_fragment	FALSE	canonical	3	187	junction_3	10.2072278312968	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTGTTTATACTGTATG	21	True	NA	-29	True	AATAAA	-16	NA	58427161	58408647	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_-_58409169_58410842_58410939_58411906_58411972_58424007_58424096_58427053
H1_mix_00025497	chr14	-	430	4	FSM	ENSG00000100575.14	ENST00000555404.5	430	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	85.8926979175503	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTCCTGATGGATGAAC	-5	True	NA	89	True	AATGAA	-43	NA	58427187	58409033	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_58409169_58410842_58410939_58411906_58411972_58427053
H1_mix_00025499	chr14	-	1516	5	FSM	ENSG00000126790.12	ENST00000247194.9	1516	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	27.5227178890458	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTACAAGCTCATTATTTT	-1	True	NA	NA	False	ATTAAA	-34	NA	59484408	59472605	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_59473091_59475868_59476007_59476091_59476215_59479181_59479352_59483808
H1_mix_00025500	chr14	-	1353	5	NIC	ENSG00000126790.12	novel	1516	5	NA	NA	37	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_4	25.791229129299	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTCATTCTTTGTAAAATA	-16	True	NA	NA	False	AATAAA	-18	NA	59484371	59472860	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_59473091_59475868_59476007_59476091_59476215_59479181_59479352_59483679
H1_mix_00025504	chr14	-	3239	9	FSM	ENSG00000139970.18	ENST00000267484.10	3239	9	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	10.7325439668328	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTTCTCCCTCTCTTCT	17	True	NA	-7	True	AATAAA	-15	NA	59870776	59595982	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_59596788_59603064_59603124_59603211_59603259_59603851_59603922_59605367_59605507_59607284_59607493_59726918_59727669_59745707_59746482_59870389
H1_mix_00025505	chr14	-	835	1	Genic_Genomic	ENSG00000261120.1	novel	NA	NA	NA	NA	417	335	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTGAAAATGCGGCTGT	NA	False	NA	74	True	AATAAA	-25	NA	59919922	59919087	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr14_-_59919100_59919900
H1_mix_00025507	chr14	-	1627	6	FSM	ENSG00000100612.14	ENST00000554101.5	1361	6	-125	-141	0	141	multi-exon	FALSE	canonical	3	347	junction_2	13.4966662550424	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACCAGTGTGTGTGTCAA	-24	True	NA	NA	False	NA	NA	NA	60165418	60148806	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_60149569_60150064_60150188_60152938_60153179_60153958_60154066_60155999_60156153_60165176
H1_mix_00025508	chr14	-	889	4	FSM	ENSG00000100612.14	ENST00000556502.1	924	4	0	35	0	-35	multi-exon	FALSE	canonical	3	371	junction_1	5.79271573232759	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCATTGTGCCATGTACTA	-10	True	NA	NA	False	AATAAA	-14	NA	60165350	60152723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_60153179_60153958_60154066_60155999_60156153_60165176
H1_mix_00025511	chr14	-	6280	4	NIC	ENSG00000100625.9	novel	6491	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_1	12.2836838484589	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTGCATTGAAAATTATTT	-2	True	NA	-16	True	AATAAA	-18	NA	60724348	60709538	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_60714204_60719759_60720446_60723211_60724048_60724255
H1_mix_00025513	chr14	-	4563	3	FSM	ENSG00000100625.9	ENST00000556952.3	1573	3	-3	-2987	0	2987	multi-exon	FALSE	canonical	3	77	junction_2	6.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGCACTTATTTATCAAT	-5	True	NA	57	True	ATTAAA	-26	NA	60724351	60716814	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_60720446_60723211_60724048_60724255
H1_mix_00025514	chr14	-	5304	5	FSM	ENSG00000126814.7	ENST00000261249.7	5304	5	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	11.7127067751225	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGCAATTTGTTTTAGC	-13	True	NA	0	True	AATAAA	-30	NA	60981079	60971440	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_60975195_60975474_60976127_60977513_60977639_60979230_60979887_60980962
H1_mix_00025515	chr14	-	485	2	FSM	ENSG00000126814.7	ENST00000553903.1	560	2	75	0	-16	0	multi-exon	FALSE	canonical	3	11	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTATAAAATATTTACTCAT	-29	True	NA	NA	False	GATAAA	-26	NA	60981095	60979473	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_60979887_60981023
H1_mix_00025516	chr14	-	3831	1	FSM	ENSG00000182107.7	ENST00000555868.2	3969	1	-171	309	-33	-309	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTAGTCTTCTGCATTT	327	False	NA	-6	True	AATAAA	-19	NA	61281509	61277678	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_61277700_61281500
H1_mix_00025518	chr14	-	6658	14	FSM	ENSG00000154001.14	ENST00000337537.8	6655	14	3	-6	-1	6	multi-exon	FALSE	canonical	3	180	junction_13	44.0241999077189	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGCTGTTTTTGTTTG	-16	True	NA	-4	True	AATAAA	-23	NA	63543374	63371357	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_63376109_63382055_63382158_63384443_63384572_63389611_63389732_63391816_63391868_63391971_63392026_63393819_63393929_63395225_63395286_63396585_63396717_63415139_63415233_63421992_63422095_63453688_63453886_63539528_63539693_63542778
H1_mix_00025519	chr14	-	6635	14	NNC	ENSG00000154001.14	novel	6655	14	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_13	67.1689559175461	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGCTGTTTTTGTTTG	4	True	NA	-4	True	AATAAA	-23	NA	63543354	63371357	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_63376109_63382055_63382158_63384443_63384572_63389611_63389732_63391816_63391868_63391971_63392026_63393819_63393929_63395225_63395286_63396585_63396717_63415139_63415233_63421992_63422095_63453688_63453886_63539528_63539690_63542778
H1_mix_00025521	chr14	-	1690	12	FSM	ENSG00000154001.14	ENST00000553266.5	1690	12	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_10	93.5772099117944	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTTTTTAAAGCTTTTT	4	True	NA	-1	True	NA	NA	NA	63543354	63382055	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_63382158_63384443_63384572_63389611_63389732_63391816_63391868_63391971_63392026_63393819_63393929_63395225_63395286_63396585_63396717_63415139_63415233_63421992_63422095_63539528_63539693_63542778
H1_mix_00025522	chr14	-	3109	3	FSM	ENSG00000140006.12	ENST00000620954.2	3109	3	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	18.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTTGGGCAGTTATT	-22	True	NA	NA	False	ATTAAA	-20	NA	63641871	63597038	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_63599974_63624927_63625034_63641803
H1_mix_00025523	chr14	-	3725	3	FSM	ENSG00000140006.12	ENST00000267522.7	1687	3	-575	-1463	-111	0	multi-exon	FALSE	canonical	3	33	junction_2	48	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTTGGGCAGTTATT	8482	False	NA	NA	False	ATTAAA	-20	NA	63641982	63597038	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_63599974_63624927_63625034_63641298
H1_mix_00025527	chr14	-	10370	3	FSM	ENSG00000089775.12	ENST00000608382.6	10365	3	0	-5	0	5	multi-exon	FALSE	canonical	3	48	junction_2	17.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTCCTTTCATGTCAAA	-20	True	NA	1	True	AATAAA	-23	NA	64503838	64478045	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_64488058_64490360_64490541_64503660
H1_mix_00025529	chr14	-	3439	7	FSM	ENSG00000139998.16	ENST00000533601.7	3437	7	0	-2	0	0	multi-exon	FALSE	canonical	3	358	junction_3	25.6168347424545	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGGCTGCCTGGATGAG	-44	True	NA	-3	True	AATAAA	-18	NA	64972336	64945813	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_64948513_64948667_64948734_64950324_64950415_64951073_64951152_64951602_64951664_64952510_64952572_64971952
H1_mix_00025530	chr14	-	3781	8	FSM	ENSG00000139998.16	ENST00000642625.1	3518	8	-261	-2	-122	0	multi-exon	FALSE	canonical	3	25	junction_6	165.175972952534	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGGCTGCCTGGATGAG	-8	True	NA	-3	True	AATAAA	-18	NA	64972458	64945813	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_64948513_64948667_64948734_64950324_64950415_64951073_64951152_64951602_64951664_64952510_64952572_64957939_64958160_64971952
H1_mix_00025534	chr14	-	2013	5	FSM	ENSG00000125952.20	ENST00000358664.9	2010	5	0	-3	0	0	multi-exon	FALSE	canonical	3	151	junction_4	114.998913038341	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTGGTGTCTTCTTACC	241	False	65102536	0	True	AATAAA	-20	NA	65102517	65075123	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_65076664_65077912_65078037_65093707_65093816_65101545_65101573_65102303
H1_mix_00025535	chr14	-	2100	6	FSM	ENSG00000125952.20	ENST00000394606.6	2097	6	0	-3	0	0	multi-exon	FALSE	canonical	0	0	junction_1	144.365646883183	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTGGTGTCTTCTTACC	239	False	65102536	0	True	AATAAA	-20	NA	65102519	65075123	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_65076664_65077343_65077429_65077912_65078037_65093707_65093816_65101545_65101573_65102303
H1_mix_00025536	chr14	-	3155	4	FSM	ENSG00000125952.20	ENST00000284165.10	3155	4	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_3	115.034294403403	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCGAAGAATTGTCTTGCA	8	True	NA	-19	True	AATAAA	-18	NA	65102488	65075201	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_65078037_65093707_65093816_65101545_65101573_65102303
H1_mix_00025537	chr14	-	1970	4	FSM	ENSG00000125952.20	ENST00000358402.8	1973	4	0	3	0	0	multi-exon	FALSE	canonical	3	277	junction_3	50.9901951359278	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGGTGGTGTCTTCTT	-8	True	NA	-3	True	AATAAA	-17	NA	65102504	65075126	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_65076664_65077912_65078037_65093707_65093816_65102303
H1_mix_00025539	chr14	-	1092	3	FSM	ENSG00000125952.20	ENST00000553951.1	1092	3	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_2	121	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGCTATTTGAAAAGCCCA	-5	True	NA	NA	False	NA	NA	NA	65101685	65077192	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_65078037_65093707_65093816_65101545
H1_mix_00025540	chr14	-	898	4	FSM	ENSG00000125952.20	ENST00000246163.2	897	4	0	-1	0	1	multi-exon	FALSE	canonical	3	32	junction_1	57.0633176587396	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGCAGTACCTCTTTTTT	-13	True	NA	NA	False	AATAAA	-20	NA	65102509	65083742	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_65084300_65093707_65093816_65101545_65101573_65102303
H1_mix_00025541	chr14	-	1441	1	FSM	ENSG00000276116.2	ENST00000621019.2	1521	1	80	0	80	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTAAATGCATGGATGCT	8	True	NA	NA	False	AATAAA	-16	NA	65412610	65411169	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_65411200_65412600
H1_mix_00025542	chr14	-	960	1	FSM	ENSG00000224861.1	ENST00000445822.1	960	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATGCCGGCTTACCATC	140	False	NA	NA	False	GGGGCT	-4	NA	66013789	66012829	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_66012800_66013800
H1_mix_00025543	chr14	-	1599	9	FSM	ENSG00000100554.12	ENST00000216442.12	1599	9	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_3	23.9478600296561	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGGCATTATAATACTTC	-13	True	NA	NA	False	AATAAA	-18	NA	67359804	67337871	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_67338763_67340439_67340519_67343371_67343439_67345767_67345872_67347408_67347454_67349036_67349105_67350610_67350691_67352922_67353041_67359657
H1_mix_00025547	chr14	-	5142	6	FSM	ENSG00000100568.11	ENST00000554659.6	5142	6	0	0	0	0	multi-exon	FALSE	canonical	3	1024	junction_4	76.8156234108661	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCTAAAAGTGTGTTGCC	-15	True	NA	-13	True	AGTAAA	-19	NA	67674632	67647084	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_67651482_67653436_67653499_67656415_67656590_67659730_67659923_67662476_67662536_67674374
H1_mix_00025548	chr14	-	565	3	FSM	ENSG00000100568.11	ENST00000554636.1	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	531.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTACATAGTACTGTAG	NA	False	NA	-13	True	AATAAA	-20	NA	67659791	67651151	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_67651482_67656415_67656590_67659730
H1_mix_00025549	chr14	-	701	1	FSM	ENSG00000258626.2	ENST00000553847.2	315	1	-123	-263	-123	263	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGGACTAGGGAGAAACC	NA	False	NA	NA	False	GATAAA	-5	NA	67652737	67652036	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_67652000_67652700
H1_mix_00025550	chr14	-	2556	7	FSM	ENSG00000072042.13	ENST00000381346.9	2539	7	0	-17	0	17	multi-exon	FALSE	canonical	0	0	junction_5	342.077679612232	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTATGGTTGTGCAATGA	-2	True	NA	75	True	ATTAAA	-37	NA	67695764	67676782	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_67678424_67685014_67685205_67690211_67690422_67691139_67691245_67692437_67692594_67692933_67693053_67695629
H1_mix_00025554	chr14	-	8079	35	FSM	ENSG00000072121.17	ENST00000555452.1	7309	35	2	-772	0	772	multi-exon	TRUE	canonical	3	15	junction_20	7.22027374419949	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATATCTTACATTTATT	5	True	NA	NA	False	NA	NA	NA	67816585	67760009	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_67761585_67762202_67762413_67762671_67762820_67766226_67766448_67767703_67767841_67768516_67768549_67769593_67769731_67772046_67772211_67775015_67775115_67775859_67776107_67777558_67777736_67778125_67778249_67780240_67780346_67781332_67781530_67782779_67783526_67784333_67784437_67785058_67785278_67785857_67786023_67786113_67786234_67789334_67789599_67790571_67790774_67793607_67793760_67794170_67794240_67797671_67797756_67798013_67798623_67802078_67802283_67804100_67804265_67805216_67805306_67805453_67805619_67806544_67806676_67807397_67807921_67809199_67809290_67813985_67814065_67815769_67816047_67816533
H1_mix_00025556	chr14	-	234	2	FSM	ENSG00000259038.2	ENST00000556301.2	319	2	84	1	84	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTAGCAATCTCATTCTTA	16	True	NA	NA	False	GATAAA	-20	NA	68628395	68627160	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_68627351_68628351
H1_mix_00025557	chr14	-	3020	2	FSM	ENSG00000185650.10	ENST00000439696.3	3017	2	0	-3	0	1	multi-exon	FALSE	canonical	3	1558	junction_1	0	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGTGGAGCTGGTTTTA	-3	True	NA	-9	True	AATAAA	-22	NA	68793067	68787658	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_68790493_68792881
H1_mix_00025558	chr14	-	727	2	FSM	ENSG00000185650.10	ENST00000557086.1	727	2	0	0	0	0	multi-exon	FALSE	canonical	2	37	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTTGCTGGGTTTCCCA	-4	True	NA	NA	False	NA	NA	NA	68796253	68789944	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_68790493_68796074
H1_mix_00025559	chr14	-	2917	2	FSM	ENSG00000072110.16	ENST00000553882.2	2903	2	0	-14	0	9	multi-exon	FALSE	canonical	3	1506	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCTGCTCCTTGCTTGA	6467	False	NA	0	True	ATTAAA	-25	NA	68879099	68874118	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_68875018_68877081
H1_mix_00025560	chr14	-	3694	21	FSM	ENSG00000072110.16	ENST00000193403.10	3779	21	109	-24	-12	9	multi-exon	FALSE	canonical	3	1103	junction_10	105.403273193957	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCTGCTCCTTGCTTGA	7315	False	NA	0	True	ATTAAA	-25	NA	68979331	68874118	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_68875018_68877081_68877241_68878988_68879070_68879961_68880109_68880809_68880990_68882457_68882593_68882872_68883056_68884167_68884309_68884774_68884884_68885424_68885576_68890138_68890287_68892052_68892284_68893654_68893748_68902476_68902563_68904654_68904737_68909317_68909397_68909954_68910043_68912155_68912243_68921005_68921126_68925557_68925673_68978951
H1_mix_00025561	chr14	-	3540	20	NIC	ENSG00000072110.16	novel	3675	21	NA	NA	3	8	combination_of_known_junctions	FALSE	canonical	3	118	junction_2	281.832831927642	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCCTGCTCCTTGCTTG	0	True	NA	-1	True	ATTAAA	-24	NA	68979259	68874119	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_68875018_68877081_68877241_68879961_68880109_68880809_68880990_68882457_68882593_68882872_68883056_68884167_68884309_68884774_68884884_68885424_68885576_68890138_68890287_68892052_68892284_68893654_68893748_68902476_68902563_68904654_68904737_68909317_68909397_68909954_68910043_68912155_68912243_68921005_68921126_68925557_68925673_68978951
H1_mix_00025571	chr14	-	5670	9	FSM	ENSG00000139990.18	ENST00000556847.5	2791	9	0	-2879	0	-42	multi-exon	FALSE	canonical	1	10	junction_8	69.6688596146083	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACGTCTTCCTCTTCTCTT	1077	False	NA	-5	True	AATAAA	-16	NA	69152609	69050922	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_69055612_69062383_69062512_69075344_69075412_69091673_69091888_69116365_69116496_69118138_69118279_69119193_69119231_69122216_69122361_69152488
H1_mix_00025572	chr14	-	5908	9	FSM	ENSG00000139990.18	ENST00000341516.10	5946	9	0	38	0	-38	multi-exon	FALSE	canonical	1	61	junction_2	46.3261197921864	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTCCTCTTCTCTTCCAG	15	True	NA	-1	True	AATAAA	-20	NA	69153119	69050918	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_69055612_69062383_69062512_69075344_69075412_69091673_69091888_69116365_69116496_69118138_69118279_69119193_69119231_69122216_69122361_69152764
H1_mix_00025576	chr14	-	668	3	FSM	ENSG00000100632.11	ENST00000216520.6	668	3	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	1264.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATATTTTCTCCCTGAG	36	False	NA	-19	True	AATAAA	-13	NA	69398271	69380134	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_69380641_69386962_69387084_69398230
H1_mix_00025577	chr14	-	586	3	FSM	ENSG00000100632.11	ENST00000555373.1	586	3	0	0	0	0	multi-exon	FALSE	canonical	3	2639	junction_2	155	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATTGGTTTTGGATTAA	8	True	NA	NA	False	NA	NA	NA	69398299	69386654	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_69387084_69394824_69394913_69398230
H1_mix_00025578	chr14	-	4476	2	FSM	ENSG00000267909.3	ENST00000599174.3	4182	2	8	-302	8	302	multi-exon	FALSE	canonical	3	23	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTTCTTACCTTGTGG	4	True	NA	NA	False	ACTAAA	-13	NA	69574863	69569496	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_69573651_69574541
H1_mix_00025579	chr14	-	890	2	Genic_Genomic	ENSG00000242071.3	novel	801	1	NA	NA	0	1452	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAACATCACTAATCATCA	16	False	NA	NA	False	NA	NA	NA	69886140	69883887	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr14_-_69883919_69885281
H1_mix_00025581	chr14	-	633	3	Intergenic	novelGene_443	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	8.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGCTTTATAACTCCTCC	NA	False	NA	-4	True	AATAAA	-23	NA	70252946	70238304	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_-_70238663_70239527_70239706_70252849
H1_mix_00025582	chr14	-	1289	3	Antisense	novelGene_ENSG00000259033.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_2	1	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTCTACATTCTTGTGT	NA	False	NA	-8	True	ATTAAA	-21	NA	70301626	70268264	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr14_-_70269216_70298984_70299087_70301390
H1_mix_00025583	chr14	-	2358	3	Antisense	novelGene_ENSG00000259033.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTGGTTTTGATTCAAA	NA	False	NA	NA	False	TATAAA	-15	NA	70301625	70276697	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr14_-_70278719_70298984_70299087_70301390
H1_mix_00025584	chr14	-	1680	4	FSM	ENSG00000133983.16	ENST00000389912.7	1669	4	0	-11	0	11	multi-exon	FALSE	canonical	3	2511	junction_3	101.299336402345	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTGTGATAGACATGAT	-16	True	NA	-1	True	AATAAA	-28	NA	70359683	70325069	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_70326450_70329173_70329237_70342657_70342730_70359518
H1_mix_00025585	chr14	-	922	6	FSM	ENSG00000258644.6	ENST00000621525.4	929	6	7	0	7	0	multi-exon	FALSE	canonical	2	17	junction_3	1275.17568985611	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACGTATTCCACTCTCCA	-21	True	NA	-25	True	AATAAA	-28	NA	70417067	70326063	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_70326450_70329173_70329237_70342657_70342730_70375675_70375772_70388469_70388607_70416899
H1_mix_00025587	chr14	-	627	3	FSM	ENSG00000133983.16	ENST00000557612.5	627	3	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_2	1198.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTCACGTATTCCACTC	28	False	70359728	-29	True	AATAAA	-24	NA	70359700	70326067	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_70326450_70329173_70329237_70359518
H1_mix_00025588	chr14	-	7085	4	FSM	ENSG00000213463.5	ENST00000256366.6	7057	4	29	-57	0	57	multi-exon	FALSE	canonical	3	130	junction_3	26.1916017074176	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGATGAGGGTTTTTTCC	-15	True	NA	56	True	ATTAAA	-19	NA	70417061	70366441	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_70373132_70375675_70375772_70388469_70388607_70416899
H1_mix_00025589	chr14	-	902	3	FSM	ENSG00000213463.5	ENST00000554216.1	902	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	76	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATACACATACGTATGCA	-15	True	NA	-73	True	AATACA	-1	NA	70417061	70372487	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_70373132_70375675_70375772_70416899
H1_mix_00025590	chr14	-	4316	8	FSM	ENSG00000133997.12	ENST00000256379.10	2351	8	2	-1967	0	3	multi-exon	FALSE	canonical	3	173	junction_2	23.5787867303106	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATTGTTGTACTTTGTTA	10	True	NA	-3	True	AATAAA	-19	NA	70600653	70581253	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_70584944_70585755_70585784_70591265_70591382_70592879_70592989_70593295_70593379_70596610_70596703_70597617_70597778_70600615
H1_mix_00025594	chr14	-	1093	4	FSM	ENSG00000133997.12	ENST00000554870.5	1093	4	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_2	6.54896090146283	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGGTGGATCACCTGAGC	8	True	NA	NA	False	NA	NA	NA	70600655	70592577	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_70593379_70596610_70596703_70597617_70597778_70600615
H1_mix_00025597	chr14	-	11511	12	FSM	ENSG00000006432.16	ENST00000554752.7	11511	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	36.7054390547007	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGTTTGTTGTGGTTC	3	True	NA	-1	True	AATAAA	-17	NA	70809513	70722525	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_70730865_70732538_70733343_70734385_70734499_70735960_70736030_70738244_70738399_70740041_70740165_70742350_70742592_70748828_70749005_70749932_70750082_70761001_70761183_70800666_70801081_70808765
H1_mix_00025599	chr14	-	338	1	Genic_Genomic	ENSG00000287643.1	novel	NA	NA	NA	NA	-207	-13259	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACCCCAAATTCTTCAGG	NA	False	NA	NA	False	NA	NA	NA	70959236	70958898	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr14_-_70958900_70959200
H1_mix_00025600	chr14	-	1077	1	FSM	ENSG00000176043.5	ENST00000488095.1	319	1	-100	-658	-100	658	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTCGGTCCAGCCTTAGC	NA	False	NA	NA	False	GGGGCT	-39	NA	72930030	72928953	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_72929000_72930000
H1_mix_00025601	chr14	-	4386	12	FSM	ENSG00000165861.14	ENST00000556143.6	4380	12	0	-6	0	6	multi-exon	FALSE	canonical	3	51	junction_6	10.720336740733	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGCTGGCTCTTTCCTCT	-11	True	NA	-1	True	CATAAA	-21	NA	73027106	72969444	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_72971115_72974079_72974194_72974778_72974960_72975550_72975722_72977926_72978045_72978136_72978235_72978860_72978970_72981788_72981896_72993142_72993358_72997810_72998316_73024025_73024943_73026925
H1_mix_00025604	chr14	-	4874	12	Fusion	ENSG00000258944.1_ENSG00000133961.21	novel	3037	12	NA	NA	0	-536	multi-exon	FALSE	canonical	2	6	junction_1	96.2109424886039	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCCTAGCCCTATGAACT	-24	True	NA	NA	False	NA	NA	NA	73458577	73272717	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr14_-_73272909_73273938_73277294_73282358_73282506_73284080_73284375_73287109_73287315_73292733_73292875_73297210_73297286_73316389_73316423_73323129_73323205_73355625_73355767_73409936_73410069_73458492
H1_mix_00025605	chr14	-	3580	11	FSM	ENSG00000133961.21	ENST00000554546.5	3607	11	27	0	-10	0	multi-exon	FALSE	canonical	3	100	junction_1	76.1167524267818	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAGTGACTAGAAAAATAC	8878	False	NA	82	True	NA	NA	NA	73458590	73275106	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_73277294_73282358_73282506_73284080_73284375_73287109_73287315_73292733_73292875_73297210_73297286_73323129_73323205_73355625_73355767_73366896_73366982_73409936_73410069_73458492
H1_mix_00025607	chr14	-	3553	12	FSM	ENSG00000133961.21	ENST00000557597.5	3547	12	0	-6	0	0	multi-exon	FALSE	canonical	3	109	junction_7	64.5832155868473	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCATGAAGGGCTGTTCTT	31	True	NA	-21	True	AATAAA	-21	NA	73458522	73275209	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_73277294_73279280_73279425_73282358_73282506_73284080_73284375_73287109_73287315_73292733_73292875_73297210_73297286_73323129_73323205_73355625_73355767_73366896_73366982_73409936_73410069_73458492
H1_mix_00025615	chr14	-	2602	1	FSM	ENSG00000176903.5	ENST00000316836.5	2602	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	357	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTCTTCTCATTTTTCT	-3	True	NA	-3	True	ATTAAA	-16	NA	73714384	73711782	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_73711800_73714400
H1_mix_00025616	chr14	-	7357	13	NIC	ENSG00000156030.14	novel	7809	13	NA	NA	111	43	combination_of_known_junctions	FALSE	canonical	3	7	junction_12	4.4744645862196	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTAAGTGCGCCTTGTC	-2	True	NA	42	True	NA	NA	NA	73787147	73715078	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_73719009_73719304_73719502_73721296_73721510_73722697_73722848_73725271_73725361_73726032_73726109_73726603_73726708_73726829_73726973_73727457_73727525_73729639_73729986_73736997_73737298_73738559_73740256_73787101
H1_mix_00025619	chr14	-	3917	12	FSM	ENSG00000156030.14	ENST00000286523.9	8091	12	0	4174	0	65	multi-exon	FALSE	canonical	3	4	junction_11	5.06486846443059	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGTGGGCAGCGCTGTC	-11	True	NA	78	True	NA	NA	NA	73760298	73719304	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_73719502_73721296_73721510_73722697_73722848_73725271_73725361_73726032_73726109_73726603_73726708_73726829_73726973_73727457_73727525_73729639_73729986_73736997_73737298_73738559_73740256_73759762
H1_mix_00025620	chr14	-	5261	16	FSM	ENSG00000187097.13	ENST00000334696.11	5261	16	0	0	0	0	multi-exon	TRUE	canonical	1	19	junction_4	7.64954610127657	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAAGTCTTCCTTCGAAG	-3	True	NA	0	True	AATAAA	-19	NA	74019288	73963229	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_73967015_73970009_73970126_73971851_73971909_73972883_73973025_73973876_73973979_73974923_73974986_73975935_73976016_73976323_73976413_73977023_73977060_73977298_73977375_73983017_73983162_73986813_73986894_73987885_73988173_74011090_74011151_74015823_74015931_74019249
H1_mix_00025621	chr14	-	847	5	FSM	ENSG00000187097.13	ENST00000556242.5	1437	5	0	590	0	-590	multi-exon	FALSE	canonical	3	12	junction_1	11.3660679216693	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTTCTTATGATTTGA	-25	True	NA	NA	False	NA	NA	NA	74019310	73986813	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_73987146_73987885_73988173_74011090_74011151_74015823_74015931_74019249
H1_mix_00025624	chr14	-	5462	12	FSM	ENSG00000119711.13	ENST00000553458.6	5462	12	0	0	0	0	multi-exon	TRUE	canonical	3	231	junction_3	25.2805743213347	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTTTTTGTATTTTA	21	False	74084474	NA	False	AATGAA	-27	NA	74084453	74056846	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_74060747_74064821_74064921_74065180_74065361_74066704_74066887_74067379_74067570_74068859_74068982_74071194_74071498_74071895_74071975_74072202_74072365_74072536_74072612_74074954_74075018_74084346
H1_mix_00025625	chr14	-	811	6	FSM	ENSG00000119711.13	ENST00000554231.5	1323	6	17	495	17	173	multi-exon	FALSE	canonical	3	255	junction_2	23.3580821130503	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTGCCCTTATGCATAT	-1	True	NA	NA	False	ATTAAA	-24	NA	74084475	74071194	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_74071498_74071895_74071975_74072202_74072365_74072536_74072612_74074954_74075018_74084346
H1_mix_00025626	chr14	-	3035	19	FSM	ENSG00000119688.21	ENST00000356924.9	3035	19	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_17	92.5881795244637	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATTTTCTCACTGTAAA	1	True	NA	NA	False	AATAAA	-22	NA	74302934	74285268	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_74286530_74286700_74286817_74287809_74287887_74288206_74288260_74288715_74288766_74289482_74289520_74290026_74290119_74290290_74290500_74292286_74292377_74292550_74292643_74292747_74292870_74293153_74293249_74295147_74295199_74295853_74295980_74296332_74296450_74297929_74298070_74299547_74299676_74300149_74300269_74302874
H1_mix_00025628	chr14	-	2354	17	FSM	ENSG00000119688.21	ENST00000481935.5	2336	17	0	-18	0	0	multi-exon	FALSE	canonical	3	114	junction_15	90.2205630662988	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTACAGCTTTCTGTCTT	-2	True	NA	-31	True	ATTAAA	-3	NA	74302937	74285995	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_74286817_74287809_74287887_74288206_74288260_74288715_74288766_74289482_74289520_74290026_74290119_74290290_74290500_74292286_74292377_74292550_74292643_74292747_74292870_74293153_74293249_74295147_74295199_74295853_74295980_74296332_74296450_74297929_74298070_74300149_74300269_74302874
H1_mix_00025633	chr14	-	1823	2	FSM	ENSG00000119688.21	ENST00000484380.2	1823	2	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGAGGTCTCGCCTTGTGG	NA	False	NA	NA	False	NA	NA	NA	74289953	74287810	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_74287887_74288206
H1_mix_00025642	chr14	-	1529	4	Antisense	novelGene_ENSG00000133980.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	27.0678160675491	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAATCTGCGTTAGTTTCT	NA	False	NA	66	True	NA	NA	NA	74350543	74325276	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr14_-_74325763_74326060_74326221_74327570_74327674_74349763
H1_mix_00025643	chr14	-	901	3	Antisense	novelGene_ENSG00000133980.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	29.5	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCCAAATCTGCGTTAGT	NA	False	NA	62	True	NA	NA	NA	74350022	74325280	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr14_-_74325763_74326060_74326221_74349763
H1_mix_00025644	chr14	-	2816	5	NNC	ENSG00000183379.9	novel	2709	4	NA	NA	-87	42402	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5.61248608016091	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTTAGAAGAACTTGTTA	1	True	NA	NA	False	NA	NA	NA	74426297	74363491	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_74363512_74405898_74407694_74407848_74407990_74409327_74409802_74425911
H1_mix_00025645	chr14	-	2447	3	FSM	ENSG00000183379.9	ENST00000554823.1	2420	3	-32	5	-32	0	multi-exon	FALSE	canonical	3	9	junction_2	3	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTGCCCTCTAGGTATC	NA	False	NA	-12	True	AATAAA	-14	NA	74409838	74405898	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_74407694_74407848_74407990_74409327
H1_mix_00025646	chr14	-	2709	4	FSM	ENSG00000183379.9	ENST00000331628.8	2709	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	2.44948974278318	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTGCCCTCTAGGTATC	-4	True	NA	-12	True	AATAAA	-14	NA	74426210	74405898	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_74407694_74407848_74407990_74409327_74409802_74425911
H1_mix_00025647	chr14	-	1126	5	FSM	ENSG00000119655.11	ENST00000555619.6	821	5	0	-305	0	305	multi-exon	FALSE	canonical	3	2386	junction_4	114.776685350292	441	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGGGATTACAGGTTAGGA	-1	True	NA	NA	False	NA	NA	NA	74493305	74479634	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_74480289_74480701_74480780_74484414_74484588_74486328_74486437_74493192
H1_mix_00025650	chr14	-	2196	13	FSM	ENSG00000119682.18	ENST00000469797.5	2196	13	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_10	7.46473189218623	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGCTTAAAATATAAGCTAA	25	False	NA	NA	False	NA	NA	NA	74713067	74670641	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_74670872_74671407_74671484_74672830_74672953_74673076_74673219_74674033_74674112_74675698_74675947_74676140_74676322_74676582_74676753_74683295_74683534_74684453_74684681_74685599_74685661_74692040_74692329_74712932
H1_mix_00025652	chr14	-	840	5	FSM	ENSG00000119682.18	ENST00000556589.5	846	5	6	0	2	0	multi-exon	FALSE	canonical	1	1	junction_3	27.3438749997143	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGGTTCTTTTTTCCTTTC	0	True	NA	NA	False	ATTAAA	-39	NA	74713092	74683295	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_74683534_74685599_74685661_74692040_74692329_74698763_74698857_74712932
H1_mix_00025653	chr14	-	1247	3	FSM	ENSG00000198208.12	ENST00000555910.5	1247	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	11	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTGTTCTCGCTTCTTCCA	NA	False	NA	-5	True	AATAAA	-16	NA	74907457	74905642	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_74906760_74907017_74907125_74907434
H1_mix_00025654	chr14	-	4971	9	NIC	ENSG00000198208.12	novel	5322	12	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_3	8.9154010005159	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTGTTCTCGCTTCTTCCA	1	True	NA	-5	True	AATAAA	-16	NA	74923243	74905642	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_74907125_74907434_74907531_74908849_74908933_74909100_74911381_74911793_74911842_74919844_74919970_74921276_74921562_74921977_74922486_74923179
H1_mix_00025655	chr14	-	4167	12	FSM	ENSG00000198208.12	ENST00000557413.6	5322	12	10	1145	1	547	multi-exon	FALSE	canonical	0	0	junction_3	8.81490098292902	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTTGCAGGTTTACCAG	-6	True	NA	NA	False	GATAAA	-17	NA	74923250	74905095	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_74907125_74907434_74907531_74908849_74908933_74909100_74909191_74909542_74910149_74911247_74911381_74911793_74911842_74918512_74918606_74919844_74919970_74921276_74921562_74921977_74922486_74923179
H1_mix_00025657	chr14	-	1626	7	FSM	ENSG00000198208.12	ENST00000553894.6	1626	7	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	7.05730511991338	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	-11	True	NA	NA	False	NA	NA	NA	74923255	74910889	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_74911381_74911793_74911842_74918512_74918606_74919844_74919970_74921276_74921562_74921977_74922486_74923179
H1_mix_00025658	chr14	-	1746	7	FSM	ENSG00000119630.14	ENST00000555567.6	1740	7	0	-6	0	6	multi-exon	FALSE	canonical	3	21	junction_2	8.23441288469042	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTAGTGGGTGTGTCTTCCG	0	True	NA	1	True	AATAAA	-24	NA	74955597	74941827	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_74942734_74946212_74946276_74946378_74946409_74948506_74948584_74949356_74949554_74953903_74953947_74955167
H1_mix_00025659	chr14	-	1712	6	FSM	ENSG00000119630.14	ENST00000553716.5	1699	6	0	-13	0	6	multi-exon	FALSE	canonical	3	11	junction_1	11.5412304370028	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTAGTGGGTGTGTCTTCCG	7	False	NA	1	True	AATAAA	-24	NA	74955626	74941827	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_74942734_74946378_74946409_74948506_74948584_74949356_74949554_74953903_74953947_74955167
H1_mix_00025662	chr14	-	7700	12	FSM	ENSG00000119684.16	ENST00000380968.6	7819	12	67	52	2	-46	multi-exon	FALSE	canonical	3	17	junction_6	18.252589536649	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAATGCTGAAGAATCT	-10	True	NA	-57	True	AAAAAG	-39	NA	75051465	75013820	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_75017202_75018828_75018981_75022813_75022893_75022994_75023019_75030542_75030703_75032067_75032180_75038339_75038413_75039910_75040016_75041614_75041701_75042378_75042478_75046375_75049719_75051379
H1_mix_00025663	chr14	-	640	3	FSM	ENSG00000119640.9	ENST00000238618.8	580	3	4	-64	0	58	multi-exon	FALSE	canonical	3	309	junction_2	4	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTAAACATTTGTAGGAA	4	True	NA	27	True	NA	NA	NA	75064020	75053178	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_75053660_75063469_75063562_75063953
H1_mix_00025664	chr14	-	847	3	FSM	ENSG00000119640.9	ENST00000555463.1	789	3	0	-58	0	58	multi-exon	FALSE	canonical	2	20	junction_2	148.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTAAACATTTGTAGGAA	17	True	NA	27	True	NA	NA	NA	75069483	75053178	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_75053660_75063469_75063562_75069209
H1_mix_00025665	chr14	-	673	4	FSM	ENSG00000119640.9	ENST00000357971.7	650	4	0	-23	0	17	multi-exon	FALSE	canonical	3	13	junction_2	136.355743879343	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGTGAACTTCCTTTTG	9	True	NA	-14	True	AATAAA	-39	NA	75064015	75053219	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_75053660_75061683_75061763_75063469_75063562_75063953
H1_mix_00025666	chr14	-	8278	22	FSM	ENSG00000119638.14	ENST00000238616.10	8278	22	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_10	25.8299866166589	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGCTCCTATTTAAATA	-13	True	NA	NA	False	ATTAAA	-16	NA	75127048	75079352	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_75084687_75087017_75087231_75088479_75088642_75091269_75091479_75095371_75095432_75097099_75097271_75100991_75101154_75101656_75101766_75103841_75103998_75105949_75105997_75106501_75106703_75107342_75107488_75109684_75109878_75110320_75110372_75113338_75113404_75114202_75114314_75117194_75117327_75118829_75118936_75120509_75120581_75121118_75121175_75124045_75124224_75126702
H1_mix_00025667	chr14	-	6010	22	FSM	ENSG00000119638.14	ENST00000678531.1	6010	22	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_21	31.9498615144675	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAACCTCACAGAATGAT	-5	True	NA	-27	True	AATAAA	-11	NA	75127040	75081410	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_75084687_75087017_75087231_75088479_75088642_75091269_75091479_75095371_75095432_75097099_75097271_75100991_75101154_75101656_75101766_75103841_75103998_75105949_75105997_75106501_75106703_75107342_75107488_75109684_75109878_75110320_75110372_75113338_75113404_75114202_75114314_75117194_75117327_75118829_75118936_75120509_75120581_75121118_75121175_75124045_75124224_75126904
H1_mix_00025668	chr14	-	3357	4	FSM	ENSG00000119638.14	ENST00000555405.5	3357	4	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	17.3781471969828	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTACTGTGCTTCAGTAA	NA	False	NA	-21	True	AATAAA	-16	NA	75091685	75082120	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_75084687_75087017_75087231_75088479_75088642_75091269
H1_mix_00025669	chr14	-	5177	16	FSM	ENSG00000119638.14	ENST00000557026.5	5177	16	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_10	23.2575913532669	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTACTGTGCTTCAGTAA	9790	False	NA	-21	True	AATAAA	-16	NA	75117245	75082120	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_75084687_75087017_75087231_75088479_75088642_75091269_75091479_75095371_75095432_75097099_75097271_75100991_75101154_75101656_75101766_75103841_75103998_75105949_75106703_75107342_75107488_75109684_75109878_75110320_75110372_75113338_75113404_75114202_75114314_75117194
H1_mix_00025671	chr14	-	1534	11	NIC	ENSG00000119638.14	novel	2667	9	NA	NA	7	754	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	24.5562619305138	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCATAAGACCTCTTTA	2	True	NA	NA	False	AATAAA	-16	NA	75127033	75107515	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_75107756_75109684_75109878_75110320_75110372_75113338_75113404_75114202_75114314_75117194_75117327_75118829_75118936_75120509_75120581_75121118_75121175_75124045_75124224_75126702
H1_mix_00025672	chr14	-	4130	5	FSM	ENSG00000170348.9	ENST00000303575.9	4109	5	0	-21	0	21	multi-exon	FALSE	canonical	3	1826	junction_2	132.52735566667	173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTACTTCTATGTCTGGA	3	True	NA	-11	True	AATAAA	-37	NA	75176612	75131447	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_75135007_75135759_75135887_75147663_75147738_75152031_75152144_75176354
H1_mix_00025673	chr14	-	1202	6	NNC	ENSG00000133935.7	novel	2320	5	NA	NA	34	57984	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	497.587218485363	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAATGAAGAGAAAAAGAGA	7	True	NA	NA	False	NA	NA	NA	75660842	75591806	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_75591832_75650899_75651635_75651770_75651890_75654885_75654977_75657369_75657534_75660774
H1_mix_00025674	chr14	-	1241	6	NNC	ENSG00000133935.7	novel	2320	5	NA	NA	0	57984	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	497.587218485363	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAATGAAGAGAAAAAGAGA	-27	True	NA	NA	False	NA	NA	NA	75660876	75591806	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_75591833_75650895_75651635_75651770_75651890_75654885_75654977_75657369_75657534_75660774
H1_mix_00025675	chr14	-	1538	6	NNC	ENSG00000133935.7	novel	2320	5	NA	NA	-293	57984	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	607.187417524441	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAATGAAGAGAAAAAGAGA	115	False	NA	NA	False	NA	NA	NA	75661169	75591806	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_75591833_75650895_75651635_75651770_75651890_75654881_75654977_75657369_75657534_75660774
H1_mix_00025677	chr14	-	2429	5	FSM	ENSG00000133935.7	ENST00000256319.7	2320	5	0	-109	0	109	multi-exon	FALSE	canonical	3	1120	junction_2	76.983764522138	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAGGACAAAACCTACCT	-27	True	NA	NA	False	AATACA	-35	NA	75660876	75649681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_75651635_75651770_75651890_75654885_75654977_75657369_75657534_75660774
H1_mix_00025678	chr14	-	3431	7	FSM	ENSG00000119699.8	ENST00000238682.8	3431	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTGACTCGATAAATATC	-1	True	NA	NA	False	AGTAAA	-20	NA	75981995	75958096	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_75959346_75960922_75961077_75963315_75963488_75965587_75965696_75971125_75971256_75971554_75971719_75980541
H1_mix_00025679	chr14	-	3220	8	FSM	ENSG00000119699.8	ENST00000556674.2	3395	8	190	-15	15	-2	multi-exon	FALSE	canonical	0	0	junction_3	1.48461497791618	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATGTCTGACTCGATAAA	NA	False	NA	NA	False	AGTAAA	-16	NA	75982821	75958100	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_75959346_75960922_75961077_75963315_75963488_75965587_75965696_75971125_75971256_75971554_75971719_75980541_75981760_75982792
H1_mix_00025680	chr14	-	6250	11	NIC	ENSG00000013523.11	novel	5287	10	NA	NA	2	4273	combination_of_known_splicesites	FALSE	canonical	3	44	junction_1	42.3566995881407	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGTCCTGTGCTGGTCTC	-24	True	NA	-2	True	AATAAA	-15	NA	76812880	76781735	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_76782777_76786084_76789389_76790610_76790775_76791296_76791367_76803370_76803482_76803785_76803913_76806415_76806850_76807432_76807503_76807921_76808149_76809058_76809644_76812763
H1_mix_00025681	chr14	-	5293	10	FSM	ENSG00000013523.11	ENST00000251089.8	5287	10	-11	5	-11	-5	multi-exon	FALSE	canonical	3	154	junction_5	15.7511512414839	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTACTTGTGAAGAATTTT	-37	True	NA	NA	False	ATTAAA	-13	NA	76812893	76786013	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_76789389_76790610_76790775_76791296_76791367_76803370_76803482_76803785_76803913_76806415_76806850_76807432_76807503_76807921_76808149_76809058_76809644_76812763
H1_mix_00025686	chr14	-	4170	1	FSM	ENSG00000119669.5	ENST00000238647.5	4166	1	0	-4	0	4	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAGTCAGCAATTTTGTC	-1	True	NA	-3	True	AATAAA	-20	NA	77028708	77024538	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_77024500_77028700
H1_mix_00025687	chr14	-	3413	3	FSM	ENSG00000177108.5	ENST00000319374.4	3408	3	0	-5	0	5	multi-exon	FALSE	canonical	3	116	junction_1	2	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATTGTATGGGCACTGT	-3	True	NA	-15	True	AATAAA	-26	NA	77141791	77131264	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_77133949_77139212_77139753_77141602
H1_mix_00025688	chr14	-	1754	4	FSM	ENSG00000165553.5	ENST00000298352.5	1778	4	18	6	18	-6	multi-exon	FALSE	canonical	2	6	junction_3	2.35702260395516	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACCCTCGGGCCTGAT	17	False	NA	NA	False	AATAAA	-17	NA	77271188	77265488	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_77266671_77268465_77268586_77269214_77269327_77270848
H1_mix_00025689	chr14	-	4878	21	FSM	ENSG00000009830.13	ENST00000261534.9	4875	21	0	-3	0	3	multi-exon	TRUE	canonical	3	82	junction_13	15.6623752987853	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGTCCTTGTACTTAA	-5	True	NA	0	True	AATAAA	-20	NA	77320883	77274952	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_77277482_77278393_77278509_77278728_77278870_77279822_77279929_77280020_77280081_77280391_77280464_77283796_77283874_77284949_77285042_77285480_77285633_77286743_77286823_77288761_77288832_77291313_77291381_77296163_77296274_77298688_77298772_77299454_77299562_77301089_77301250_77302834_77302944_77304691_77304801_77306336_77306442_77311948_77312034_77320433
H1_mix_00025696	chr14	-	7769	6	FSM	ENSG00000100580.8	ENST00000216468.8	7761	6	0	-8	0	8	multi-exon	FALSE	canonical	3	44	junction_1	9.2	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGAGTTATATTTTAAT	-11	True	NA	-6	True	AATAAA	-24	NA	77377094	77335020	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_77341989_77343177_77343484_77343696_77343824_77346348_77346479_77351672_77351752_77376935
H1_mix_00025697	chr14	-	2761	21	FSM	ENSG00000151445.16	ENST00000343765.6	2761	21	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_20	28.7288617943698	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCGCTCCTGGTGGTTT	21	True	NA	-15	True	AATAAA	-24	NA	77457561	77426674	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_77427637_77428369_77428475_77429005_77429096_77429680_77429768_77433841_77433932_77434261_77434304_77435258_77435394_77435843_77435920_77437807_77437882_77441065_77441094_77442559_77442663_77443118_77443153_77444248_77444342_77448493_77448551_77449292_77449358_77449713_77449753_77451186_77451334_77453298_77453402_77454009_77454103_77457094_77457366_77457494
H1_mix_00025702	chr14	-	8038	12	FSM	ENSG00000100596.8	ENST00000216484.7	8034	12	0	-4	0	4	multi-exon	FALSE	canonical	3	151	junction_2	21.1327953977299	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTTTATTCATTCAACCA	24	True	NA	4	True	AATAAA	-20	NA	77616637	77505992	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_77512404_77518037_77518168_77521445_77521582_77552095_77552223_77555299_77555520_77557040_77557147_77562395_77562490_77570383_77570509_77576766_77576916_77578954_77579110_77597185_77597381_77616447
H1_mix_00025703	chr14	-	2594	6	FSM	ENSG00000100601.10	ENST00000216489.8	2597	6	0	3	0	-3	multi-exon	FALSE	canonical	3	83	junction_2	9.26066952223218	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGTAAGCTAGGTTCT	-4	True	NA	-13	True	AATAAA	-18	NA	77708023	77672406	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_77674242_77675655_77675850_77679879_77679971_77694737_77694901_77704368_77704478_77707821
H1_mix_00025704	chr14	-	1763	5	FSM	ENSG00000100601.10	ENST00000557057.5	1750	5	-13	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	35.27304211434	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGAATAAACTCACTTGAT	-4	True	NA	-45	True	AATAAA	-34	NA	77708023	77673074	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_77674242_77675655_77675850_77679879_77679971_77704368_77704478_77707821
H1_mix_00025705	chr14	-	2129	14	FSM	ENSG00000100603.14	ENST00000261531.12	2129	14	0	0	0	0	multi-exon	FALSE	canonical	3	526	junction_13	63.9697598675717	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCAGTTATGTTAACTTT	-5	True	NA	-26	True	AATAAA	-16	NA	77761156	77717598	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_77718287_77718366_77718531_77720710_77720829_77723180_77723278_77730987_77731130_77732484_77732602_77734946_77735013_77735936_77736007_77736970_77737076_77738777_77738885_77738965_77739062_77751318_77751481_77754966_77755121_77761113
H1_mix_00025706	chr14	-	1855	13	FSM	ENSG00000100603.14	ENST00000555761.5	1855	13	0	0	0	0	multi-exon	FALSE	canonical	3	526	junction_12	66.4046936092121	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAATGGGGGGGATAGAA	-5	True	NA	NA	False	GATAAA	-45	NA	77761156	77717952	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_77718531_77720710_77720829_77723180_77723278_77730987_77731130_77732484_77732602_77734946_77735013_77735936_77736007_77736970_77737076_77738777_77738885_77738965_77739062_77751318_77751481_77754966_77755121_77761113
H1_mix_00025707	chr14	-	602	5	FSM	ENSG00000100603.14	ENST00000557663.1	602	5	0	0	0	0	multi-exon	FALSE	canonical	3	526	junction_4	70.0178548657412	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTCAGCTTGGGGGGTCA	-5	True	NA	NA	False	NA	NA	NA	77761156	77738737	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_77738885_77738965_77739062_77751318_77751481_77754966_77755121_77761113
H1_mix_00025708	chr14	-	8003	25	FSM	ENSG00000100629.17	ENST00000555265.6	4614	25	37	-3426	0	-2574	multi-exon	FALSE	canonical	3	25	junction_17	7.41608143758474	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTGGAGCTCTGTGTCA	1	True	NA	NA	False	AATAAA	-24	NA	80941701	80493052	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_80497583_80504911_80505021_80526868_80526983_80530808_80530887_80559278_80559303_80580373_80580424_80743074_80743268_80756891_80756952_80761436_80761614_80777881_80778047_80784894_80785546_80792759_80793111_80831142_80831295_80836204_80836338_80838203_80838279_80840681_80840769_80862756_80862874_80895717_80895791_80899937_80900030_80904812_80904932_80905954_80906082_80914321_80914409_80916400_80916563_80939384_80939541_80941580
H1_mix_00025709	chr14	-	1706	4	FSM	ENSG00000100629.17	ENST00000553717.1	501	4	-187	-1018	-187	0	multi-exon	FALSE	canonical	3	35	junction_2	7.78888096369861	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATTTTGTGTTTGTTAA	NA	False	NA	NA	False	AATAAA	-22	NA	80531187	80496478	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_80497583_80504911_80505021_80526868_80526983_80530808
H1_mix_00025710	chr14	-	1823	8	FSM	ENSG00000100629.17	ENST00000554827.5	1823	8	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	6.70668262531743	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCAGAGCAATGGTAATTA	NA	False	NA	NA	False	AATAAA	-17	NA	80904928	80830164	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_80831295_80836204_80836338_80838203_80838279_80840681_80840769_80862756_80862874_80895717_80895791_80899937_80900030_80904812
H1_mix_00025711	chr14	-	6343	9	FSM	ENSG00000165417.12	ENST00000553612.6	6343	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	4.48434777866302	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTATTTTGCAGTTTAA	-4	True	NA	0	True	AATAAA	-25	NA	81220959	81175451	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_81180331_81185530_81185621_81192518_81192840_81196107_81196242_81197408_81197485_81201593_81201659_81203899_81204105_81216412_81216515_81220488
H1_mix_00025712	chr14	-	277	1	Intergenic	novelGene_449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAAAAAGTCCCAC	389	False	NA	NA	False	AATAAA	-20	NA	81246282	81246005	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_-_81246000_81246300
H1_mix_00025718	chr14	-	7919	21	FSM	ENSG00000071537.14	ENST00000336735.9	7919	21	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_15	20.4242502922384	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGTTTCCCACTGCCTCC	-13	True	NA	NA	False	TATAAA	-19	NA	81533853	81471546	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_81477182_81479611_81479741_81484224_81484398_81485671_81485747_81486288_81486455_81487389_81487539_81487854_81487943_81489251_81489315_81490387_81490466_81492479_81492549_81495080_81495138_81497891_81498047_81498412_81498495_81499458_81499519_81499608_81499663_81502720_81502884_81504200_81504307_81506073_81506242_81526732_81526965_81527700_81527739_81533674
H1_mix_00025724	chr14	-	7842	2	Intergenic	novelGene_450	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	41	junction_1	0	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAGAAACAGTCACAAAAGA	NA	False	NA	18	True	AATAAA	-40	NA	85677014	85664876	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_-_85666378_85670673
H1_mix_00025729	chr14	-	3794	17	FSM	ENSG00000054983.17	ENST00000261304.7	3794	17	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_6	15.4631618694237	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGTGTCAAATATATTT	-2	True	NA	-2	True	ATTAAA	-18	NA	87993182	87933013	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_87934879_87939904_87939982_87941394_87941559_87945552_87945734_87947727_87947879_87949844_87949932_87950658_87950749_87963383_87963512_87965504_87965630_87968334_87968491_87976357_87976489_87982204_87982244_87984393_87984534_87986488_87986603_87988143_87988208_87988454_87988524_87992969
H1_mix_00025734	chr14	-	3943	19	FSM	ENSG00000070778.13	ENST00000536337.5	3943	19	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_18	28.0803520782683	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTAACCTGGGAAAGGTG	4448	False	NA	NA	False	NA	NA	NA	88550530	88467954	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_88468266_88468915_88469077_88469498_88469734_88469921_88470051_88472243_88472466_88473664_88473803_88478919_88480353_88485075_88485161_88485781_88485843_88496412_88496493_88497202_88497291_88500782_88500872_88501280_88501369_88504424_88504496_88505303_88505372_88507922_88508021_88517091_88517262_88547528_88547652_88550237
H1_mix_00025735	chr14	-	527	3	FSM	ENSG00000053254.16	ENST00000557572.1	513	3	0	-14	0	14	multi-exon	FALSE	canonical	0	0	junction_2	2	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCCAAAAGGTGGAAACAAC	NA	False	NA	NA	False	NA	NA	NA	89180744	89124856	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_89125227_89125327_89125441_89180700
H1_mix_00025737	chr14	-	7832	7	FSM	ENSG00000053254.16	ENST00000345097.8	7832	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	80.8723273643917	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTAGTGTTATGTGTGCTGC	33	True	NA	-3	True	AATAAA	-36	NA	89619130	89156171	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_89162970_89180700_89180807_89190383_89190450_89280949_89281015_89350671_89350809_89411933_89412491_89619027
H1_mix_00025739	chr14	-	1625	7	NNC	ENSG00000053254.16	novel	1595	6	NA	NA	0	-70	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_6	63.0125648845794	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAACCACAAAAAATTAAAA	14	True	NA	NA	False	NA	NA	NA	89619149	89162431	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_89162970_89180700_89180807_89280949_89281015_89350671_89350809_89411933_89412491_89486568_89486669_89619027
H1_mix_00025740	chr14	-	464	4	FSM	ENSG00000053254.16	ENST00000556916.5	467	4	0	3	0	-3	multi-exon	FALSE	canonical	1	3	junction_1	86.7730116773387	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCGTGTGCGTAGTGCAGT	6491	False	NA	NA	False	AATAAA	-15	NA	89412058	89230730	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_89230868_89280949_89281015_89350671_89350809_89411933
H1_mix_00025742	chr14	-	3141	6	FSM	ENSG00000140025.16	ENST00000316738.12	3136	6	0	-5	0	5	multi-exon	FALSE	canonical	3	160	junction_4	14.5794375748861	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATGGTATCATTGAGTAG	4	True	NA	NA	False	AATAAA	-25	NA	89954730	89794663	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_89797325_89931540_89931632_89932525_89932628_89950096_89950143_89953905_89954002_89954585
H1_mix_00025743	chr14	-	2716	6	FSM	ENSG00000140025.16	ENST00000555872.5	2716	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	72.4966206108947	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTAGCTGGGCGTGGTGGC	2016	False	NA	NA	False	AATACA	-14	NA	89954557	89795146	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_89797325_89931540_89931632_89932525_89932628_89950096_89950143_89953905_89954002_89954354
H1_mix_00025745	chr14	-	14008	14	FSM	ENSG00000119720.18	ENST00000354366.8	14008	14	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	7.83634379182464	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGAGTCTGTCTTGG	13	True	NA	-4	True	AATAAA	-14	NA	90331941	90267859	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_90278462_90279061_90279134_90286353_90286493_90288216_90289146_90290220_90290608_90292696_90292873_90298259_90298381_90301238_90301373_90302719_90303126_90303934_90304383_90312393_90312544_90316577_90316812_90318004_90318114_90331840
H1_mix_00025746	chr14	-	543	1	FSM	ENSG00000242571.1	ENST00000461458.1	483	1	-41	-19	-41	19	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAATAAAGGACCTCTGG	2	False	NA	NA	False	NA	NA	NA	90367220	90366677	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_90366700_90367200
H1_mix_00025750	chr14	-	2249	13	FSM	ENSG00000100784.12	ENST00000418736.6	2249	13	0	0	0	0	multi-exon	TRUE	canonical	2	15	junction_6	6.37867541108654	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTAAAGAGTTGTCTTGG	17	True	NA	NA	False	AATAAA	-24	NA	91060600	90893973	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_90894584_90899328_90899423_90900107_90900242_90900610_90900737_90902807_90902970_90906148_90906300_90920205_90920310_90923112_90923197_90943077_90943186_90947434_90947551_90978305_90978525_91001087_91001160_91060331
H1_mix_00025751	chr14	-	7616	30	FSM	ENSG00000015133.20	ENST00000389857.11	7519	30	-96	-1	-72	1	multi-exon	FALSE	canonical	3	48	junction_19	23.7352119302642	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTTCTGGCTTTCCTCAC	NA	False	NA	-3	True	AATAAA	-18	NA	91417916	91271321	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_91273654_91277921_91278212_91279237_91279307_91281456_91281526_91283328_91283518_91289104_91289344_91290994_91291085_91294172_91294319_91297304_91297492_91299926_91300071_91303700_91303979_91305764_91305927_91307037_91307227_91308350_91308493_91309858_91309987_91313079_91314151_91315649_91315788_91321119_91321305_91324778_91324924_91325909_91326057_91338004_91338164_91338488_91338571_91339277_91339463_91339883_91340025_91342379_91342464_91343598_91343658_91359641_91359712_91408658_91408768_91416737_91416839_91417630
H1_mix_00025752	chr14	-	689	2	FSM	ENSG00000015133.20	ENST00000555995.1	689	2	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	0	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTTTCACCATGTTGGCC	NA	False	NA	NA	False	NA	NA	NA	91291071	91288731	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_91289344_91290994
H1_mix_00025753	chr14	-	429	2	FSM	ENSG00000015133.20	ENST00000557507.1	429	2	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGGGGGAGCGGGCAGAG	NA	False	NA	NA	False	NA	NA	NA	91315870	91313942	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_91314151_91315649
H1_mix_00025755	chr14	-	1672	4	FSM	ENSG00000015133.20	ENST00000553403.1	1651	4	0	-21	0	3	multi-exon	FALSE	canonical	1	1	junction_1	34.1011567089577	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAATGTGTACTTCTCAT	4	True	NA	NA	False	AATAAA	-19	NA	91417844	91378637	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_91379886_91408658_91408768_91416737_91416839_91417630
H1_mix_00025757	chr14	-	5174	15	FSM	ENSG00000100796.18	ENST00000554943.6	4416	15	-244	-514	0	514	multi-exon	FALSE	canonical	3	217	junction_8	132.934558858017	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGGATCTAAGCCAATTAT	-9	True	NA	NA	False	AATAAA	-15	NA	91510554	91456993	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_91458870_91461380_91461608_91462048_91462240_91462734_91462878_91465249_91465420_91470836_91470996_91473032_91473136_91473238_91473371_91475810_91475967_91476407_91476525_91476908_91476987_91481575_91482194_91485631_91485731_91490746_91490803_91509505
H1_mix_00025758	chr14	-	4444	15	FSM	ENSG00000100796.18	ENST00000554684.5	4108	15	-336	0	0	0	multi-exon	FALSE	canonical	3	369	junction_8	102.898429213929	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATTAGTTGTATGTTTC	8	True	NA	-7	True	AATAAA	-25	NA	91510480	91457610	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_91458870_91461380_91461608_91462048_91462240_91462734_91462878_91465249_91465420_91470836_91470996_91473032_91473136_91473238_91473371_91475849_91475967_91476407_91476525_91476908_91476987_91481575_91482194_91485631_91485731_91490746_91490803_91509505
H1_mix_00025759	chr14	-	2515	15	FSM	ENSG00000100796.18	ENST00000554308.5	2515	15	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_5	210.817613890611	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACATTCTTGACTCCCATT	891	False	NA	NA	False	AATACA	-28	NA	91509654	91461380	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_91461608_91462048_91462240_91462734_91462878_91465249_91465420_91466260_91466417_91470836_91470996_91473032_91473136_91473238_91473371_91475849_91475967_91476407_91476525_91476908_91476987_91481575_91482194_91485631_91485731_91490746_91490803_91509505
H1_mix_00025762	chr14	-	4692	13	Fusion	ENSG00000133962.8_ENSG00000165929.13	novel	3751	12	NA	NA	0	-3008	multi-exon	FALSE	non_canonical	0	0	junction_1	21.218931536615	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGGAAGTACATATT	4	True	NA	NA	False	NA	NA	NA	91836447	91707582	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr14_-_91707616_91780046_91783211_91785161_91785362_91787512_91787628_91792366_91792559_91797784_91797902_91798298_91798400_91798988_91799065_91800280_91800373_91802253_91802422_91812311_91812546_91813702_91813826_91836370
H1_mix_00025765	chr14	-	1770	11	FSM	ENSG00000165929.13	ENST00000556018.5	1770	11	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	19.630588376307	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATATCAACCATAGATAG	4765	False	NA	-28	True	AATAAA	-15	NA	91836526	91782822	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_91783211_91785161_91785362_91787512_91787628_91797784_91797902_91798298_91798400_91798988_91799065_91800280_91800373_91802253_91802422_91812311_91812546_91813702_91813826_91836370
H1_mix_00025766	chr14	-	2627	11	FSM	ENSG00000140092.15	ENST00000342058.9	2625	11	0	-2	0	2	multi-exon	FALSE	canonical	3	9	junction_2	3.85227205685164	165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTGGTTCATTTTGA	-12	True	NA	1	True	ATTAAA	-15	NA	91947694	91869408	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_91870386_91877486_91877683_91881291_91881419_91882953_91883077_91887192_91887313_91891220_91891338_91894949_91895073_91936946_91937202_91940564_91940617_91942906_91942962_91947212
H1_mix_00025767	chr14	-	9998	21	FSM	ENSG00000100815.12	ENST00000267622.8	9996	21	0	-2	0	2	multi-exon	FALSE	canonical	3	38	junction_12	11.0239511972795	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGACTTTTTCTTTAGAA	-9	True	NA	2	True	AATAAA	-21	NA	92040059	91965988	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_91969894_91972716_91972862_91974626_91974744_91975171_91975287_91976107_91976190_91988283_91988384_91993808_91993913_91995351_91995516_91999239_91999434_91999967_92000109_92003418_92006449_92007639_92007853_92010985_92011073_92011754_92011796_92014214_92014578_92015695_92015862_92017681_92017751_92021555_92021832_92025309_92025421_92033191_92033254_92039546
H1_mix_00025768	chr14	-	6888	11	FSM	ENSG00000066427.25	ENST00000644486.2	6884	11	0	-4	0	4	multi-exon	FALSE	canonical	3	99	junction_2	36.8667872210205	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGAATTTGTGTTTATT	-8	True	NA	-6	True	AATAAA	-24	NA	92106582	92058547	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_92064415_92070934_92071054_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92093745_92093832_92096092_92096138_92096673_92096839_92106528
H1_mix_00025769	chr14	-	1315	10	FSM	ENSG00000066427.25	ENST00000503767.5	1315	10	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_8	60.7303288275815	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTAAATGTTTCTTTT	11	False	NA	-10	True	ATTAAA	-14	NA	92106600	92064093	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_92064415_92070934_92071054_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92093745_92093832_92096673_92096839_92106528
H1_mix_00025774	chr14	-	1333	2	FSM	ENSG00000183648.11	ENST00000553666.1	1333	2	0	0	0	0	multi-exon	FALSE	canonical	3	2669	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTCTTTCTTTTCATAC	3273	False	NA	-20	True	AATAAA	-16	NA	92118726	92116125	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_92116230_92117497
H1_mix_00025775	chr14	-	461	3	FSM	ENSG00000183648.11	ENST00000555441.5	458	3	0	-3	0	0	multi-exon	FALSE	canonical	3	23	junction_2	1323	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTTCTTTTCATACAAA	595	False	NA	-17	True	AATAAA	-19	NA	92121404	92116122	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_92116230_92117497_92117643_92121195
H1_mix_00025776	chr14	-	528	3	FSM	ENSG00000183648.11	ENST00000329559.8	528	3	0	0	0	0	multi-exon	FALSE	canonical	3	2669	junction_1	43	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTTCTTTTCATACAAA	0	True	NA	-17	True	AATAAA	-19	NA	92121917	92116122	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_92116230_92117497_92117643_92121641
H1_mix_00025777	chr14	-	4092	2	Antisense	novelGene_ENSG00000100599.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	22	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAGAGTTTGACTCTTCA	1443	False	NA	-4	True	AATAAA	-15	NA	92627979	92621329	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr14_-_92625057_92627614
H1_mix_00025778	chr14	-	1739	12	FSM	ENSG00000100600.15	ENST00000555699.5	1728	12	0	-11	0	11	multi-exon	FALSE	canonical	3	20	junction_1	146.095745804417	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGACTTTGTGGTTGATG	38	False	NA	-1	True	AATAAA	-34	NA	92748612	92703795	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_92704362_92709671_92709873_92711658_92711749_92711836_92711956_92712804_92712872_92713822_92713886_92714375_92714452_92716135_92716222_92717379_92717462_92718746_92718845_92732648_92732816_92748488
H1_mix_00025779	chr14	-	1993	14	FSM	ENSG00000100600.15	ENST00000334869.9	1980	14	0	-13	0	11	multi-exon	FALSE	canonical	3	403	junction_3	47.9414090137623	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGACTTTGTGGTTGATG	-2	True	NA	-1	True	AATAAA	-34	NA	92748627	92703795	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_92704362_92704639_92704708_92706482_92706654_92709671_92709873_92711658_92711749_92711836_92711956_92712804_92712872_92713822_92713886_92714375_92714452_92716135_92716222_92717379_92717462_92718746_92718845_92732648_92732816_92748488
H1_mix_00025780	chr14	-	2113	15	FSM	ENSG00000100600.15	ENST00000393218.6	2115	15	7	-5	7	0	multi-exon	FALSE	canonical	0	0	junction_14	173.179392656333	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAAAGATTTATAAC	NA	False	NA	-44	True	NA	NA	NA	92748672	92703838	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_92704362_92704639_92704708_92706482_92706654_92709671_92709873_92711658_92711749_92711836_92711956_92712804_92712872_92713822_92713886_92714375_92714452_92716135_92716222_92717379_92717462_92718746_92718845_92732648_92732816_92741061_92741180_92748488
H1_mix_00025781	chr14	-	1019	5	FSM	ENSG00000100600.15	ENST00000557725.5	741	5	0	-278	0	278	multi-exon	FALSE	canonical	3	403	junction_1	40.5547469477988	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCAGATGTAGAATTGG	3	True	NA	NA	False	NA	NA	NA	92712834	92706074	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_92706654_92709671_92709873_92711658_92711749_92711836_92711956_92712804
H1_mix_00025782	chr14	-	6188	11	FSM	ENSG00000100605.17	ENST00000267615.11	6188	11	0	0	0	0	multi-exon	TRUE	canonical	3	92	junction_10	91.3496579085001	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGAGGGTGTCCTTCTGTGC	-18	True	NA	-1	True	AATAAA	-18	NA	93115925	92936913	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_92941905_92946330_92946494_92951945_92952014_92958200_92958367_92962354_92962396_92962750_92962850_92993879_92993998_93016675_93016802_93076594_93076620_93115068_93115306_93115771
H1_mix_00025783	chr14	-	3174	11	FSM	ENSG00000100605.17	ENST00000556603.6	3174	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_10	114.163961038499	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCCTCAGGTACGGGTG	36	True	NA	-37	True	AATAAA	-37	NA	93115871	92939752	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_92941905_92946330_92946494_92951945_92952014_92958200_92958367_92962354_92962396_92962750_92962850_92993879_92993998_93016675_93016802_93076594_93076620_93115068_93115185_93115771
H1_mix_00025785	chr14	-	3733	10	NIC	ENSG00000100605.17	novel	6188	11	NA	NA	-22	-8	combination_of_known_junctions	FALSE	canonical	3	52	junction_8	131.614757700056	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATCCCAGTCTGCCTCAGG	NA	False	NA	-45	True	AATAAA	-29	NA	93116342	92939760	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_92941905_92946330_92946494_92951945_92952014_92958200_92958367_92962354_92962396_92962750_92962850_92993879_92993998_93016675_93016802_93115068_93115306_93115771
H1_mix_00025787	chr14	-	2532	2	FSM	ENSG00000165943.5	ENST00000556883.1	2529	2	0	-3	0	3	multi-exon	FALSE	canonical	3	136	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCTGTTTTGTTTATA	4	False	NA	-17	True	AATAAA	-19	NA	93184923	93182195	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_93184363_93184558
H1_mix_00025790	chr14	-	8447	11	FSM	ENSG00000011114.15	ENST00000334746.10	8445	11	0	-2	0	2	multi-exon	FALSE	canonical	3	31	junction_8	15.2918278828922	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGAGTTGGATACAGTCT	2	True	NA	-11	True	AATAAA	-17	NA	93333036	93237547	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_93243089_93245824_93246287_93248475_93248655_93251462_93251653_93253646_93253791_93257194_93257356_93261601_93261678_93263784_93263994_93293857_93294938_93295969_93296158_93332819
H1_mix_00025791	chr14	-	2697	9	FSM	ENSG00000011114.15	ENST00000554565.5	2697	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	20.733050306214	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACAAGCAGGCTGGCACT	-1	True	NA	NA	False	NA	NA	NA	93333039	93242032	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_93243089_93245824_93246287_93248475_93248655_93251462_93251653_93253646_93253791_93257194_93257356_93261601_93261678_93263784_93263994_93332819
H1_mix_00025792	chr14	-	2675	4	FSM	ENSG00000011114.15	ENST00000298896.7	2621	4	-54	0	-54	0	multi-exon	FALSE	canonical	3	14	junction_1	23.2283351869125	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATGGCTCTTGTGGTGC	152	False	NA	0	True	ATTAAA	-19	NA	93333146	93287627	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_93288708_93293857_93294938_93295969_93296158_93332819
H1_mix_00025795	chr14	-	5573	9	FSM	ENSG00000089737.18	ENST00000621632.5	5573	9	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_6	98.6280100934821	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCAAAGCAACTCTCCT	3	True	NA	NA	False	AATAAA	-20	NA	94081202	94048286	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_94051463_94052997_94053128_94054995_94055185_94057821_94057898_94060097_94060614_94060912_94061067_94062096_94062622_94079024_94079748_94081118
H1_mix_00025796	chr14	-	5573	8	FSM	ENSG00000089737.18	ENST00000555762.1	5573	8	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_5	105.369708693742	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTCATCCTGATTTT	7	True	NA	-16	True	ATTAAA	-16	NA	94081198	94050919	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_94051463_94052997_94053128_94054995_94057898_94060097_94060614_94060912_94061067_94062096_94062622_94079024_94079748_94081118
H1_mix_00025800	chr14	-	667	3	FSM	ENSG00000119632.4	ENST00000555558.1	516	3	-78	-73	-78	73	multi-exon	FALSE	canonical	3	314	junction_1	1	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCTGTCATGGAGGGGCA	199	False	NA	64	True	NA	NA	NA	94129479	94127705	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_94127993_94128513_94128676_94129261
H1_mix_00025803	chr14	-	7789	14	FSM	ENSG00000100697.15	ENST00000675540.1	7768	14	0	-21	0	5	multi-exon	FALSE	canonical	3	3	junction_7	36.8340272320334	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTTCATCTTTTTTCA	NA	False	NA	0	True	AATAAA	-21	NA	95111394	95086222	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_95090664_95091033_95091110_95091202_95091366_95093887_95094157_95095824_95096714_95099779_95099936_95103345_95104050_95105070_95105247_95105677_95105784_95106040_95106224_95107607_95107762_95107879_95108094_95108323_95108504_95111316
H1_mix_00025804	chr14	-	10513	29	FSM	ENSG00000100697.15	ENST00000393063.6	7423	29	-66	-3024	0	5	multi-exon	TRUE	canonical	3	50	junction_27	28.279039616519	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTTCATCTTTTTTCA	6	True	NA	0	True	AATAAA	-21	NA	95157486	95086222	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_95090664_95091033_95091110_95091202_95091366_95093887_95094157_95095824_95096714_95099779_95099936_95103345_95104127_95105070_95105247_95105677_95105784_95106040_95106224_95107607_95107762_95107879_95108094_95108323_95108504_95111316_95111457_95112171_95112248_95113091_95113225_95115666_95115822_95116452_95116696_95117621_95117755_95124195_95124669_95126579_95126749_95129471_95129633_95130057_95130193_95131508_95131640_95132514_95132678_95133314_95133504_95140658_95140760_95141682_95141749_95157229
H1_mix_00025810	chr14	-	12749	13	FSM	ENSG00000165959.12	ENST00000298912.9	12749	13	0	0	0	0	multi-exon	TRUE	canonical	2	11	junction_12	3.749073959734	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATTTCGTTGATGATACTT	-17	True	NA	-1	True	TATAAA	-14	NA	95319908	95181939	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_95191733_95193848_95193920_95194535_95194597_95196497_95196695_95202837_95204464_95209394_95209478_95210685_95210880_95213218_95213410_95215640_95215734_95221690_95221775_95223759_95223856_95230071_95230134_95319710
H1_mix_00025811	chr14	-	1637	2	FSM	ENSG00000247092.8	ENST00000667668.1	1637	2	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	0	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAAATACTTAGCACCAA	505	False	NA	NA	False	AATAAA	-15	NA	95534235	95531967	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_95533062_95533692
H1_mix_00025813	chr14	-	447	2	FSM	ENSG00000247092.8	ENST00000660378.2	449	2	0	2	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGTTCCTACCTGTGT	NA	False	NA	-34	True	ATTAAA	-16	NA	95534889	95532911	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_95533062_95534592
H1_mix_00025814	chr14	-	275	1	FSM	ENSG00000252481.1	ENST00000516672.1	275	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTTTTTTTTTAAACT	-3	True	NA	-2	True	NA	NA	NA	95533629	95533354	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_95533400_95533600
H1_mix_00025815	chr14	-	1219	4	FSM	ENSG00000100721.11	ENST00000554012.5	1391	4	83	89	-9	0	multi-exon	FALSE	canonical	0	0	junction_2	0.942809041582063	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGTGCGGAATCAGCTTC	37	False	NA	-10	True	ATTAAA	-20	NA	95714113	95710055	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_95710882_95711753_95711803_95712219_95712397_95713946
H1_mix_00025817	chr14	-	13073	42	FSM	ENSG00000066739.12	ENST00000359933.6	13162	42	0	89	0	-89	multi-exon	TRUE	canonical	2	5	junction_24	4.24978566139015	177	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCACGTTTTCTTGATT	36	True	NA	NA	False	NA	NA	NA	96363341	96279283	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_96285986_96289655_96289806_96290435_96290591_96290813_96290936_96291599_96291683_96292028_96292099_96294959_96295168_96295481_96295561_96302006_96302109_96303060_96303256_96304494_96304604_96305588_96305816_96306713_96306917_96309452_96309595_96311116_96311288_96311541_96311619_96312088_96312160_96313064_96313158_96313328_96313436_96315153_96315235_96315383_96315584_96316532_96316684_96317144_96317318_96317697_96317856_96322111_96322255_96322539_96322736_96323895_96323999_96325648_96325923_96328346_96328536_96328673_96328767_96329483_96329635_96331375_96331638_96332304_96332411_96332500_96332656_96333687_96333874_96334404_96334502_96341521_96341702_96343118_96343282_96344653_96344757_96345232_96345386_96347178_96347342_96362814
H1_mix_00025818	chr14	-	461	1	FSM	ENSG00000232573.1	ENST00000417615.1	423	1	52	-90	52	90	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAACTCCCTCCTCTCTCT	NA	False	NA	9	True	AAAAAG	-9	NA	98973249	98972788	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_98972800_98973200
H1_mix_00025819	chr14	-	2858	13	FSM	ENSG00000183576.13	ENST00000331768.10	2856	13	0	-2	0	2	multi-exon	FALSE	canonical	3	281	junction_1	29.3300187521249	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTCTATTCCTTTTTT	4	True	NA	-4	True	ATTAAA	-19	NA	99480859	99397745	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_99399126_99400098_99400260_99404224_99404311_99405204_99405372_99406515_99406591_99412950_99413066_99413875_99413935_99458278_99458536_99459112_99459186_99461191_99461341_99463485_99463579_99465702_99465814_99480727
H1_mix_00025820	chr14	-	1330	9	FSM	ENSG00000183576.13	ENST00000329331.7	1330	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	110.726013203763	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGATCTTTTTTCTTTGT	3	True	NA	-1	True	AATAAA	-18	NA	99480788	99409803	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_99410216_99412950_99413066_99413875_99413935_99458278_99458536_99459112_99459186_99461191_99461341_99463485_99463579_99465702_99465814_99480727
H1_mix_00025821	chr14	-	16087	6	FSM	ENSG00000205476.9	ENST00000380243.9	16564	6	0	477	0	-477	multi-exon	FALSE	canonical	3	95	junction_3	9.2	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATTTTAGCAACTGCCT	-10	True	NA	NA	False	NA	NA	NA	99604207	99500666	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_99515336_99516187_99516287_99517087_99517184_99522132_99522241_99536014_99536089_99603166
H1_mix_00025822	chr14	-	5174	2	FSM	ENSG00000197119.13	ENST00000554912.1	5169	2	0	-5	0	5	multi-exon	FALSE	canonical	3	697	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGCCTTTGCATATGG	9987	False	NA	-14	True	AATAAA	-24	NA	100296545	100291110	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_100293033_100293293
H1_mix_00025823	chr14	-	2249	3	FSM	ENSG00000197119.13	ENST00000392908.7	2242	3	0	-7	0	5	multi-exon	FALSE	canonical	3	34	junction_2	331.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGCCTTTGCATATGG	0	True	NA	-14	True	AATAAA	-24	NA	100306441	100291110	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_100293033_100293293_100293378_100306198
H1_mix_00025825	chr14	-	2720	5	FSM	ENSG00000197119.13_ENSG00000259052.1	ENST00000556868.1	1067	5	17	-1670	-10	5	multi-exon	FALSE	canonical	3	97	junction_3	237.882323849419	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGCCTTTGCATATGG	32	False	NA	-14	True	AATAAA	-24	NA	100306500	100291110	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_100293033_100293293_100293378_100295625_100295994_100298841_100298886_100306198
H1_mix_00025826	chr14	-	1099	5	FSM	ENSG00000197119.13	ENST00000554224.5	1124	5	25	0	-5	0	multi-exon	FALSE	canonical	3	126	junction_3	229.091002660515	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCACACGGGGGCTGGCGT	10	False	NA	NA	False	NA	NA	NA	100306522	100292457	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_100293033_100293293_100293378_100295625_100295698_100298841_100298886_100306198
H1_mix_00025835	chr14	-	1050	2	FSM	ENSG00000197119.13	ENST00000556844.1	1050	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTATCAGCTCCAGCGGGT	108	False	NA	NA	False	NA	NA	NA	100306424	100304952	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_100305777_100306198
H1_mix_00025837	chr14	-	2480	10	FSM	ENSG00000140105.18	ENST00000358655.8	2466	10	0	-14	0	2	multi-exon	FALSE	canonical	3	312	junction_9	330.498090243077	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCATTGTGCTCTGTCT	-23	True	NA	-8	True	AATAAA	-18	NA	100376335	100333787	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_100335037_100337061_100337203_100342397_100342572_100343274_100343388_100346745_100346847_100353686_100353870_100354446_100354567_100360553_100360663_100361707_100361922_100376259
H1_mix_00025838	chr14	-	2700	10	FSM	ENSG00000140105.18	ENST00000344102.9	2690	10	0	-10	0	0	multi-exon	FALSE	canonical	3	137	junction_9	384.085381454324	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAGTAAATAAACTTCCTT	4	True	NA	-38	True	NA	NA	NA	100375608	100333817	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_100335037_100337061_100337203_100342397_100342572_100343274_100343388_100346745_100346847_100353686_100353870_100354446_100354567_100360553_100360663_100361707_100361922_100375282
H1_mix_00025841	chr14	-	2784	7	FSM	ENSG00000183092.18	ENST00000554140.3	2788	7	4	0	4	0	multi-exon	FALSE	canonical	3	7	junction_3	3.19722101554181	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGTTGGGCTGTTTCTC	3	True	NA	0	True	AATAAA	-19	NA	100587413	100537146	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_100539316_100540495_100540580_100543857_100543966_100544999_100545067_100546500_100546663_100567910_100567940_100587248
H1_mix_00025845	chr14	-	2039	1	Intergenic	novelGene_457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAGCTCTGCGTGAATTA	NA	False	NA	0	True	NA	NA	NA	101300110	101298071	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_-_101298100_101300100
H1_mix_00025847	chr14	-	3232	11	FSM	ENSG00000080824.19	ENST00000216281.13	3228	11	0	-4	0	4	multi-exon	FALSE	canonical	3	2377	junction_7	348.424468141949	1090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTCTCAAAGTTCTTTA	-1	True	NA	-1	True	AATACA	-23	NA	102087044	102080737	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_102081822_102082110_102082445_102083033_102083303_102083545_102083694_102083792_102083984_102084398_102084565_102084680_102084999_102085297_102085432_102085757_102086125_102086216_102086379_102086985
H1_mix_00025848	chr14	-	1710	7	FSM	ENSG00000080824.19	ENST00000554401.1	1710	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1127.97361326505	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGATGGAGCGAGACTC	0	True	NA	NA	False	NA	NA	NA	102086331	102082664	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_102083303_102083545_102083694_102083792_102083984_102084398_102084565_102084680_102084999_102085297_102085432_102086216
H1_mix_00025851	chr14	-	1021	2	FSM	ENSG00000080823.23	ENST00000521937.1	559	2	0	-462	0	75	multi-exon	FALSE	canonical	3	46	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTTGTTGGGAAGACTT	8826	False	NA	69	True	NA	NA	NA	102231821	102228751	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_102229658_102231706
H1_mix_00025853	chr14	-	1434	6	NIC	ENSG00000080823.23	novel	2705	10	NA	NA	-245	-1	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	17.6861527755473	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTGCATTTTAATGTTT	NA	False	NA	-19	True	ATTAAA	-18	NA	102247709	102228839	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_102229367_102229456_102229658_102231706_102231822_102232534_102232709_102233687_102233790_102247394
H1_mix_00025854	chr14	-	1505	11	FSM	ENSG00000080823.23	ENST00000524214.5	1539	11	34	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	22.2227361051694	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCACCCGCGGCCCGCGCA	0	True	NA	-78	True	GGGGCT	-23	NA	102305151	102229136	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_102229367_102229456_102229658_102231706_102231822_102232534_102232709_102233687_102233790_102250811_102250991_102251755_102251805_102251916_102251996_102263545_102263617_102283477_102283593_102304961
H1_mix_00025858	chr14	-	1444	2	FSM	ENSG00000156381.9	ENST00000559651.1	1444	2	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCCTCATCTGTCGCA	993	False	NA	0	True	NA	NA	NA	102508817	102506841	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_102507943_102508474
H1_mix_00025860	chr14	-	6846	37	FSM	ENSG00000198752.11	ENST00000361246.7	6844	37	0	-2	0	2	multi-exon	FALSE	canonical	3	14	junction_15	6.48621520259088	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGGTCCGTTTGGATGTG	-6	True	NA	1	True	AATAAA	-27	NA	103057549	102932377	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_102933844_102938103_102938175_102938305_102938412_102939609_102939728_102939829_102939948_102940045_102940131_102940226_102940325_102943890_102944488_102945661_102945725_102946467_102946685_102947720_102947803_102949764_102949905_102950465_102950603_102952497_102952604_102954197_102954276_102954601_102954689_102959630_102959711_102963060_102963156_102964501_102964651_102966281_102966388_102967045_102967171_102968252_102968359_102968471_102968717_102970150_102970262_102971918_102972162_102974015_102974150_102975683_102975804_102975882_102976050_102978125_102978206_102980772_102981022_102983555_102983757_102986486_102986581_102999564_102999714_103003927_103004024_103008471_103008556_103012096_103012189_103056998
H1_mix_00025861	chr14	-	6717	36	NIC	ENSG00000198752.11	novel	6844	37	NA	NA	48	-1	intron_retention	FALSE	canonical	3	16	junction_14	6.16481126711789	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTGGTCCGTTTGGAT	229	False	NA	-2	True	AATAAA	-24	NA	103057501	102932380	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_102933844_102938103_102938175_102938305_102938412_102939609_102939728_102939829_102939948_102940045_102940131_102940226_102940325_102943890_102944488_102945661_102945725_102946467_102946685_102947720_102947803_102949764_102949905_102950465_102950603_102952497_102952604_102954601_102954689_102959630_102959711_102963060_102963156_102964501_102964651_102966281_102966388_102967045_102967171_102968252_102968359_102968471_102968717_102970150_102970262_102971918_102972162_102974015_102974150_102975683_102975804_102975882_102976050_102978125_102978206_102980772_102981022_102983555_102983757_102986486_102986581_102999564_102999714_103003927_103004024_103008471_103008556_103012096_103012189_103056998
H1_mix_00025862	chr14	-	1921	2	ISM	ENSG00000251533.2	ENST00000514902.2	1558	3	-219	0	-219	0	intron_retention	FALSE	canonical	3	16	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCTTCTTTTATTCAT	NA	False	NA	-5	True	AATAAA	-13	NA	103189247	103187220	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_-_103188271_103188376
H1_mix_00025863	chr14	-	771	1	FSM	ENSG00000259775.1	ENST00000563989.1	694	1	-111	34	-111	-34	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCCAGCTTCTAATAAACC	2181	False	NA	-44	True	NA	NA	NA	103332478	103331707	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_103331700_103332500
H1_mix_00025866	chr14	-	816	3	FSM	ENSG00000166165.14	ENST00000555770.1	816	3	0	0	0	0	multi-exon	FALSE	canonical	3	2324	junction_2	372.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGGAGGGACCGAGGGACG	1	True	NA	NA	False	NA	NA	NA	103522830	103521682	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_103521951_103522022_103522506_103522765
H1_mix_00025868	chr14	-	4702	2	FSM	ENSG00000166170.12	ENST00000299204.6	4684	2	0	-18	0	12	multi-exon	FALSE	canonical	3	235	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGTGTTCTCTATATAT	-1	True	NA	11	True	AATAAA	-44	NA	103562657	103556532	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_103561193_103562615
H1_mix_00025870	chr14	-	5135	9	ISM	ENSG00000126215.14	ENST00000555055.6	2567	10	52	-128	44	120	3prime_fragment	FALSE	canonical	3	160	junction_8	42.9591011893871	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCCCAGAACCGTTAAGTA	12	True	NA	95	True	NA	NA	NA	103715399	103697488	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_-_103699018_103699132_103699180_103699363_103699577_103703172_103703328_103707002_103707216_103708521_103708660_103711032_103711246_103711465_103711568_103712874
H1_mix_00025871	chr14	-	4083	10	FSM	ENSG00000126215.14	ENST00000555055.6	2567	10	0	-1516	0	1508	multi-exon	FALSE	canonical	3	40	junction_9	65.7047267029634	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGGGGGCGCAGTGATTAT	11	True	NA	NA	False	NA	NA	NA	103715451	103696100	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_103699018_103699132_103699180_103699363_103699577_103703172_103703328_103707002_103707216_103708521_103708660_103711032_103711246_103711465_103711568_103712874_103712932_103715423
H1_mix_00025872	chr14	-	2543	9	FSM	ENSG00000126215.14	ENST00000352127.11	2563	9	20	0	0	0	multi-exon	FALSE	canonical	3	62	junction_8	63.1603861213657	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCAGGACCTGCTTCTTG	-22	True	NA	-33	True	AATAAA	-16	NA	103715484	103697616	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_103699018_103699132_103699180_103699363_103699577_103703172_103703328_103707002_103707216_103708521_103708660_103711032_103711246_103711465_103711568_103715423
H1_mix_00025873	chr14	-	3018	8	FSM	ENSG00000126215.14	ENST00000553264.5	3018	8	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_3	42.2374241638857	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCCAGGACCTGCTTCTT	3358	False	NA	-34	True	AATAAA	-15	NA	103712104	103697617	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_103699018_103699132_103699180_103699363_103699577_103703172_103703328_103707002_103707216_103708521_103708660_103711032_103711246_103711465
H1_mix_00025876	chr14	-	2599	8	FSM	ENSG00000126215.14	ENST00000557439.5	2599	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	108.736716289337	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGGCTTTTAATAGAAGC	-21	True	NA	NA	False	AATAAA	-12	NA	103715483	103704395	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_103706043_103706206_103706376_103707002_103707216_103708521_103708660_103711032_103711246_103711465_103711568_103712874_103712932_103715423
H1_mix_00025877	chr14	-	5500	17	FSM	ENSG00000088808.18	ENST00000202556.14	5500	17	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_8	5.96735913114001	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGAACATATTGCACTAG	17	True	NA	NA	False	AATAAA	-1	NA	103847575	103733194	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_103735196_103736002_103736203_103737693_103737861_103738678_103738813_103738885_103739024_103739823_103740594_103741789_103742292_103742653_103742824_103746372_103746554_103749793_103749935_103752999_103753197_103754069_103754245_103757649_103757752_103778744_103778822_103784794_103784915_103797370_103797519_103847298
H1_mix_00025880	chr14	-	749	5	FSM	ENSG00000156411.10	ENST00000555030.5	749	5	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_2	2027.97095331763	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTACTTATCTTGTGG	3	True	NA	-28	True	AATAAA	-17	NA	103921520	103912299	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_103912695_103913960_103913985_103914478_103914634_103915065_103915190_103921469
H1_mix_00025885	chr14	-	5179	14	FSM	ENSG00000142208.18	ENST00000402615.6	3913	14	-1263	-3	-40	0	multi-exon	FALSE	canonical	3	242	junction_13	175.266323130454	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGCTCACTTTGCTGG	5157	False	NA	-2	True	AATAAA	-15	NA	104795791	104769348	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_104770421_104770744_104770848_104772364_104772453_104772877_104773093_104773250_104773380_104773454_104773581_104773911_104773981_104774937_104775004_104775075_104775208_104775651_104775800_104776658_104776771_104780087_104780217_104792597_104792723_104793126
H1_mix_00025886	chr14	-	2780	14	FSM	ENSG00000142208.18	ENST00000407796.7	2779	14	0	-1	0	1	multi-exon	FALSE	canonical	3	363	junction_13	145.602522899008	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGCTCACTTTGCTGGG	-4	True	NA	-1	True	AATAAA	-16	NA	104795748	104769347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_104770421_104770744_104770848_104772364_104772453_104772877_104773093_104773250_104773380_104773454_104773581_104773911_104773981_104774937_104775004_104775075_104775208_104775651_104775800_104776658_104776771_104780087_104780217_104792597_104792723_104795483
H1_mix_00025887	chr14	-	3000	15	FSM	ENSG00000142208.18	ENST00000649815.2	2957	15	-43	0	-40	0	multi-exon	FALSE	canonical	3	86	junction_14	251.415350707606	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGCTCACTTTGCTGG	5157	False	NA	-2	True	AATAAA	-15	NA	104795791	104769348	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_104770421_104770744_104770848_104772364_104772453_104772877_104773093_104773250_104773380_104773454_104773581_104773911_104773981_104774937_104775004_104775075_104775208_104775651_104775800_104776658_104776771_104780087_104780217_104792597_104792723_104793126_104793305_104795483
H1_mix_00025888	chr14	-	2867	15	FSM	ENSG00000142208.18	ENST00000349310.7	2866	15	0	-1	0	1	multi-exon	FALSE	canonical	3	29	junction_14	262.474955073463	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGCTCACTTTGCTGGG	-7	True	NA	-1	True	AATAAA	-16	NA	104795751	104769347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_104770421_104770744_104770848_104772364_104772453_104772877_104773093_104773250_104773380_104773454_104773581_104773911_104773981_104774937_104775004_104775075_104775208_104775651_104775800_104776658_104776771_104780087_104780217_104792597_104792723_104793126_104793211_104795483
H1_mix_00025890	chr14	-	2869	13	FSM	ENSG00000142208.18	ENST00000554826.2	2857	13	0	-12	0	0	multi-exon	FALSE	canonical	3	363	junction_12	150.595392433574	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTCCAAATTCTTCAATAA	5406	False	NA	34	True	AATATA	-13	NA	104795542	104769383	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_104770421_104770744_104770848_104772364_104772453_104772877_104773093_104773250_104773380_104773454_104773981_104774937_104775004_104775075_104775208_104775651_104775800_104776658_104776771_104780087_104780217_104792597_104792723_104795483
H1_mix_00025891	chr14	-	4386	12	FSM	ENSG00000142208.18	ENST00000610370.2	4373	12	0	-13	0	0	multi-exon	FALSE	canonical	3	363	junction_11	155.919453670983	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTCCAAATTCTTCAATAA	5406	False	NA	34	True	AATATA	-13	NA	104795542	104769383	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_104770421_104770744_104772453_104772877_104773093_104773250_104773380_104773454_104773981_104774937_104775004_104775075_104775208_104775651_104775800_104776658_104776771_104780087_104780217_104792597_104792723_104795483
H1_mix_00025894	chr14	-	484	1	FSM	ENSG00000196183.5	ENST00000476944.2	856	1	359	13	359	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGCTACAACATAGGGTT	NA	False	NA	NA	False	NA	NA	NA	104836493	104836009	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_104836000_104836500
H1_mix_00025896	chr14	-	2810	2	FSM	ENSG00000170779.11	ENST00000336219.4	2448	2	-109	-253	-109	253	multi-exon	FALSE	canonical	3	598	junction_1	0	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGCTGTTTTCCAAGCA	3820	False	NA	NA	False	NA	NA	NA	105021192	105009319	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_105011936_105020998
H1_mix_00025897	chr14	-	5468	26	FSM	ENSG00000184916.9	ENST00000331782.8	5773	26	299	6	299	-6	multi-exon	TRUE	canonical	2	7	junction_23	6.18177967902448	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATTTTGACCTGGTAA	8536	False	NA	NA	False	AATAAA	-13	NA	105168477	105141000	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_105143171_105143481_105143639_105144929_105145062_105145730_105145974_105146384_105146501_105146610_105146725_105147325_105147412_105147499_105147528_105147771_105147889_105148115_105148230_105148325_105148440_105148744_105148859_105148936_105149090_105149169_105149321_105150603_105150778_105150864_105150912_105150990_105151105_105151282_105151397_105151625_105151740_105151937_105152058_105152160_105152292_105155561_105155623_105155737_105155990_105157705_105157764_105167756_105168108_105168354
H1_mix_00025902	chr14	-	4139	14	FSM	ENSG00000185024.18	ENST00000392557.8	3579	14	-560	0	85	0	multi-exon	FALSE	canonical	2	6	junction_13	18.4868416342399	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTGAGGCTTGTCTGAT	7	True	NA	-9	True	AGTAAA	-31	NA	105248454	105209285	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_105210589_105211121_105211294_105212112_105212165_105217543_105217801_105218997_105219054_105219150_105219233_105220068_105220131_105221647_105221915_105226068_105226162_105226250_105226291_105226633_105226761_105228819_105228914_105241264_105241415_105247070
H1_mix_00025907	chr14	-	572	3	FSM	ENSG00000251602.7	ENST00000661026.1	572	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.5	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGAGAACTGACTGCTGG	NA	False	NA	NA	False	NA	NA	NA	105419080	105418017	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_105418313_105418681_105418817_105418938
H1_mix_00025908	chr14	-	701	1	FSM	ENSG00000225200.2	ENST00000392301.3	627	1	-11	-63	-11	63	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAAAGAAACAGAGG	7921	False	NA	NA	False	AATAAA	-33	NA	105979157	105978456	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_105978500_105979200
H1_mix_00025909	chr14	+	4175	1	Intergenic	novelGene_418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGTCTTTAATCATTT	2551	False	NA	-8	True	AATAAA	-9	NA	20477762	20481937	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_20477800_20481900
H1_mix_00025910	chr14	+	298	1	Intergenic	novelGene_419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAAGGTTCATGTTCTCA	630	False	NA	NA	False	AATAAA	-3	NA	20625994	20626292	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_20626000_20626300
H1_mix_00025911	chr14	+	294	1	Intergenic	novelGene_420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAACCAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	20650471	20650765	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_20650500_20650800
H1_mix_00025912	chr14	+	5845	1	Intergenic	novelGene_421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	199	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACCCATGAGGGCTGGG	NA	False	NA	NA	False	NA	NA	NA	20814556	20820401	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_20814600_20820400
H1_mix_00025913	chr14	+	302	1	Intergenic	novelGene_422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCACATCTTTCTTCCTC	4886	False	NA	NA	False	NA	NA	NA	24171281	24171583	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_24171300_24171600
H1_mix_00025914	chr14	+	342	1	Intergenic	novelGene_423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	209	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGGTCCCAACAGATGTC	NA	False	NA	NA	False	NA	NA	NA	25266311	25266653	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_25266300_25266700
H1_mix_00025915	chr14	+	2198	1	Intergenic	novelGene_424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGGAAATGCCAAACAC	NA	False	NA	NA	False	NA	NA	NA	30900006	30902204	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_30900000_30902200
H1_mix_00025916	chr14	+	247	1	Intergenic	novelGene_425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAGATTGAAAGGAGAAAGA	NA	False	NA	NA	False	AATGAA	-43	NA	31250209	31250456	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_31250200_31250500
H1_mix_00025917	chr14	+	261	1	Intergenic	novelGene_432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAATACACACCTCACC	4152	False	NA	NA	False	ACTAAA	-5	NA	41520402	41520663	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_41520400_41520700
H1_mix_00025918	chr14	+	303	1	Intergenic	novelGene_439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4482	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCCTTTGATTTCTAAAG	3030	False	NA	NA	False	NA	NA	NA	50671584	50671887	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_50671600_50671900
H1_mix_00025920	chr14	+	340	1	Intergenic	novelGene_441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCCTTTGCACAGTCTCC	NA	False	NA	NA	False	NA	NA	NA	64331504	64331844	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_64331500_64331800
H1_mix_00025921	chr14	+	238	1	Intergenic	novelGene_442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTCAATATGATTGTTAC	NA	False	NA	NA	False	NA	NA	NA	64596881	64597119	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_64596900_64597100
H1_mix_00025923	chr14	+	356	1	Intergenic	novelGene_446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACCATCCTTTACTAGTC	NA	False	NA	NA	False	AATACA	-10	NA	73707537	73707893	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_73707500_73707900
H1_mix_00025928	chr14	+	2725	1	Intergenic	novelGene_454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGATCATGCCATTGCATT	NA	False	NA	NA	False	NA	NA	NA	89383029	89385754	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_89383000_89385800
H1_mix_00025930	chr14	+	255	1	Intergenic	novelGene_456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCTACAAAACAACTCCTT	NA	False	NA	NA	False	NA	NA	NA	98988447	98988702	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_98988400_98988700
H1_mix_00025932	chr14	+	2229	1	FSM	ENSG00000257884.2	ENST00000547785.2	2268	1	-3	42	-3	-42	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCCATCTGCTGTATTA	9356	False	NA	NA	False	NA	NA	NA	19677833	19680062	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_19677800_19680100
H1_mix_00025933	chr14	+	248	1	FSM	ENSG00000258806.2	ENST00000553765.2	945	1	-11	708	-11	-708	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGCTGGTAAATTTTTT	NA	False	NA	NA	False	NA	NA	NA	20229390	20229638	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_20229400_20229600
H1_mix_00025934	chr14	+	2003	15	FSM	ENSG00000129484.14	ENST00000527915.5	1980	15	-23	0	-1	0	multi-exon	FALSE	canonical	2	2	junction_2	87.8765367677045	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACTGGCTTCTTCGGGCT	-11	True	NA	13	True	AATAAA	-15	NA	20343613	20357903	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_20343688_20344931_20345127_20345393_20345465_20346862_20346914_20350525_20350623_20351046_20351123_20352244_20352348_20354084_20354248_20354808_20354948_20355751_20355816_20355896_20356032_20356306_20356435_20356589_20356690_20357050_20357150_20357395
H1_mix_00025935	chr14	+	1900	16	FSM	ENSG00000129484.14	ENST00000250416.9	1886	16	-14	0	-14	0	multi-exon	FALSE	canonical	2	2	junction_2	85.702482785247	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGGCTTCTTCGGGCTT	13	False	NA	14	True	AATAAA	-16	NA	20343600	20357904	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_20343688_20344931_20345127_20345393_20345465_20346862_20346914_20350525_20350623_20351046_20351123_20352244_20352348_20354084_20354248_20354808_20354948_20355751_20355816_20355896_20356032_20356306_20356435_20356589_20356690_20357050_20357150_20357395_20357521_20357637
H1_mix_00025939	chr14	+	655	4	ISM	ENSG00000100823.12	ENST00000555414.5	1437	5	0	912	0	0	5prime_fragment	FALSE	canonical	3	332	junction_1	880.276597944583	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGACCCTATTGATGCCT	0	True	NA	NA	False	NA	NA	NA	20455190	20456860	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_+_20455339_20455577_20455704_20455913_20456102_20456667
H1_mix_00025940	chr14	+	1023	2	FSM	ENSG00000198805.12	ENST00000556293.5	1023	2	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTAGTCCCTCTCCCAT	-1	True	NA	NA	False	NA	NA	NA	20469405	20473200	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_20469536_20472307
H1_mix_00025941	chr14	+	4897	2	FSM	ENSG00000198805.12	ENST00000556754.1	2573	2	-2148	-176	710	174	multi-exon	FALSE	canonical	3	317	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGGTGGAAAGAGGTTAT	1027	False	NA	NA	False	NA	NA	NA	20471235	20477263	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_20475253_20476383
H1_mix_00025942	chr14	+	576	3	FSM	ENSG00000165792.18	ENST00000554949.1	576	3	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_2	218.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGAACTGAGGTAAGGGG	-16	True	NA	NA	False	NA	NA	NA	20989972	20992193	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_20990078_20990229_20990599_20992091
H1_mix_00025944	chr14	+	727	6	FSM	ENSG00000165792.18	ENST00000553441.5	635	6	-37	-55	0	0	multi-exon	FALSE	canonical	3	472	junction_3	78.0061536034177	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTTCCATCAGATTAG	10	True	NA	NA	False	NA	NA	NA	20989998	20993312	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_20990078_20990229_20990384_20990463_20990599_20992123_20992206_20992540_20992623_20993117
H1_mix_00025949	chr14	+	300	1	FSM	ENSG00000258870.1	ENST00000557776.1	341	1	-97	138	-97	-138	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGCCCACCATTCCTGG	NA	False	NA	NA	False	AAAACA	-10	NA	21419522	21419822	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_21419500_21419800
H1_mix_00025950	chr14	+	3633	7	FSM	ENSG00000092203.15	ENST00000613005.4	3633	7	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_4	47.2710858300881	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATAAAAAGAATGTAGCGG	-37	True	NA	NA	False	NA	NA	NA	21477181	21496227	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_21477285_21477495_21477565_21487450_21488851_21489172_21489404_21492295_21492377_21492507_21493258_21495228
H1_mix_00025953	chr14	+	247	1	FSM	ENSG00000256737.1	ENST00000398583.3	1266	1	279	740	279	-740	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGGAAGGCTATGGGCTT	NA	False	NA	NA	False	NA	NA	NA	21564097	21564344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_21564100_21564300
H1_mix_00025954	chr14	+	978	4	FSM	ENSG00000277734.8	ENST00000611116.2	978	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.69967317119759	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTGCCTCTGTTTGACT	-16	True	NA	18	True	ATTAAA	-19	NA	22547505	22552156	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_22547779_22549637_22549683_22550556_22550665_22551604
H1_mix_00025955	chr14	+	815	3	FSM	ENSG00000100439.11	ENST00000539344.1	986	3	-6	177	0	3	multi-exon	FALSE	canonical	3	183	junction_1	28	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAGCCTGTAGTATCT	10	True	NA	NA	False	NA	NA	NA	22598293	22604079	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_22598330_22601666_22601756_22603389
H1_mix_00025960	chr14	+	1780	8	FSM	ENSG00000197324.9	ENST00000546834.5	1780	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_7	107.180564793193	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGACTGGGGAGAGGGCT	146	False	NA	NA	False	NA	NA	NA	22872303	22879310	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_22872338_22872737_22872783_22873310_22873447_22875054_22875246_22875354_22876373_22876688_22876819_22876939_22877054_22879198
H1_mix_00025961	chr14	+	2566	5	FSM	ENSG00000197324.9	ENST00000551466.1	2566	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	119.792268114432	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATACCAGAACTCAGTCCTT	38	False	NA	NA	False	AAAAAG	-8	NA	22875135	22880392	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_22875246_22875354_22876373_22876688_22876819_22876939_22877054_22879198
H1_mix_00025962	chr14	+	2169	10	FSM	ENSG00000258643.6	ENST00000678502.1	2145	10	-24	0	-24	0	multi-exon	FALSE	canonical	3	6	junction_3	1552.26499583156	2082	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGTGTAAGGATTATTTA	21	False	NA	29	True	AATAAA	-33	NA	23306808	23326175	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23306895_23307191_23307280_23307759_23308200_23319734_23319831_23322180_23322296_23322998_23323067_23323376_23323484_23323964_23324053_23324137_23324290_23325246
H1_mix_00025969	chr14	+	2733	3	FSM	ENSG00000259431.6	ENST00000556015.5	535	3	-285	-1913	-2	501	multi-exon	FALSE	canonical	1	6	junction_2	10.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGTCTCAAAAAAAAAAAAAA	-18	True	NA	NA	False	NA	NA	NA	23555985	23560772	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23556344_23556742_23557040_23558694
H1_mix_00025972	chr14	+	823	4	FSM	ENSG00000157326.19	ENST00000397074.7	785	4	60	-98	57	0	multi-exon	FALSE	canonical	2	15	junction_2	147.02909764926	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATTGACCTGTTCATTT	92	False	NA	NA	False	AATAAA	-26	NA	23953845	23969274	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23953917_23955034_23955213_23967210_23967267_23968756
H1_mix_00025973	chr14	+	434	2	FSM	ENSG00000286931.2	ENST00000658653.2	2893	2	29	2430	29	-2430	multi-exon	FALSE	canonical	2	3	junction_1	0	243	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTGCAAGGCTACAGTAA	-12	True	NA	NA	False	AAAAAG	-39	NA	24007088	24025352	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24007462_24025291
H1_mix_00025974	chr14	+	4584	40	FSM	ENSG00000186648.15	ENST00000342740.6	4589	40	0	5	0	0	multi-exon	TRUE	canonical	2	4	junction_5	3.51833742339362	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCGCCTGCCTCGAGTCT	-17	True	NA	5	True	AATAAA	-10	NA	24052008	24069724	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24052194_24053708_24053804_24054087_24054139_24054241_24054302_24054395_24054512_24054710_24054809_24055065_24055137_24055236_24055311_24055542_24055619_24055700_24055790_24056298_24056394_24056621_24056709_24056914_24057025_24057166_24057245_24057802_24057880_24057959_24058065_24058154_24058225_24058679_24058762_24058889_24058987_24059134_24059190_24059269_24059443_24059663_24059733_24059969_24060064_24060156_24060256_24060627_24060757_24060926_24061041_24061496_24061673_24062479_24062568_24062708_24062847_24063119_24063184_24063324_24063534_24064245_24064347_24064957_24065274_24065621_24065751_24066397_24066465_24066566_24066657_24068583_24068703_24068785_24068967_24069136_24069248_24069378
H1_mix_00025975	chr14	+	756	5	FSM	ENSG00000100889.12	ENST00000559837.5	756	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	188.137416533767	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGCGGGAGATCATCTCC	28	False	NA	NA	False	NA	NA	NA	24094193	24099108	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24094255_24096891_24097138_24098202_24098388_24098474_24098679_24099048
H1_mix_00025977	chr14	+	2432	9	FSM	ENSG00000100889.12	ENST00000558096.5	2433	9	0	1	0	-1	multi-exon	FALSE	canonical	2	9	junction_1	169.721831241594	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTGTGCTGTTTTCATT	65	False	NA	17	True	NA	NA	NA	24094376	24104129	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24094846_24096891_24097138_24098202_24098388_24098474_24098679_24099048_24099237_24099557_24099721_24099994_24100214_24102752_24102891_24103509
H1_mix_00025979	chr14	+	568	4	FSM	ENSG00000100897.18	ENST00000557809.5	568	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	208.720440355568	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGGCGGGCCGCCCAGAA	-28	True	NA	NA	False	NA	NA	NA	24114776	24117345	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24114925_24115514_24115727_24116916_24117045_24117265
H1_mix_00025986	chr14	+	2570	15	FSM	ENSG00000100897.18	ENST00000326009.9	2570	15	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	117.126152990208	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCAGTGTCTGTCTCTCTC	49	True	NA	16	True	AATAAA	-16	NA	24115274	24124029	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24115294_24115381_24115727_24116916_24117045_24117265_24117394_24117667_24117733_24118054_24118156_24118387_24118535_24118749_24118805_24119144_24119214_24119558_24119617_24119710_24119897_24120837_24120992_24121364_24121518_24122970_24123078_24123174
H1_mix_00025988	chr14	+	1142	10	FSM	ENSG00000092010.15	ENST00000382708.7	1136	10	-6	0	0	0	multi-exon	FALSE	canonical	2	536	junction_4	108.683479726369	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCCAAGTCTCTTTATT	-15	True	NA	34	True	AATAAA	-21	NA	24136193	24138964	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24136302_24136984_24137018_24137142_24137206_24137320_24137432_24137519_24137566_24137699_24137798_24138048_24138118_24138195_24138264_24138344_24138400_24138473
H1_mix_00025993	chr14	+	1096	7	NIC	ENSG00000100918.14	novel	1064	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	186	junction_4	8.49346153749394	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGAGGTGAGTAGCCTC	34	False	NA	NA	False	NA	NA	NA	24172748	24177750	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_24172782_24172898_24173199_24173290_24173412_24175542_24175625_24176821_24176902_24177140_24177223_24177352
H1_mix_00025995	chr14	+	219	1	FSM	ENSG00000276698.1	ENST00000610486.1	658	1	-80	519	-80	-519	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGGGATTACAGGCATGA	20	False	NA	NA	False	NA	NA	NA	24198352	24198571	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24198400_24198600
H1_mix_00025996	chr14	+	2160	10	FSM	ENSG00000100938.19	ENST00000561038.5	2160	10	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_3	133.408127170206	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGATGCTGGGGCTTTC	8	True	NA	30	True	AATAAA	-20	NA	24232489	24239239	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24232789_24233218_24233341_24233478_24233599_24234106_24234242_24235736_24235821_24235966_24236141_24237070_24237153_24237244_24237352_24237519_24237563_24238245
H1_mix_00025999	chr14	+	2810	11	FSM	ENSG00000100968.14	ENST00000556279.5	2924	11	114	0	80	0	multi-exon	FALSE	canonical	1	3	junction_1	29.445033537084	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACGTGAACTGTCATCAC	68	False	NA	NA	False	NA	NA	NA	24367581	24377705	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24367654_24368311_24368441_24369498_24370595_24372440_24372604_24373170_24373371_24373694_24373868_24374325_24374467_24375659_24375716_24375974_24376102_24376293_24376879_24377637
H1_mix_00026000	chr14	+	2486	11	FSM	ENSG00000100968.14	ENST00000553469.5	2566	11	80	0	80	0	multi-exon	FALSE	canonical	1	2	junction_10	37.9889457605762	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACGTGAACTGTCATCAC	68	False	NA	NA	False	NA	NA	NA	24367581	24377705	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24367654_24368311_24368441_24369498_24370595_24372440_24372604_24373170_24373371_24373694_24373868_24374325_24374467_24375659_24375716_24375974_24376102_24376293_24376555_24377637
H1_mix_00026001	chr14	+	5367	9	FSM	ENSG00000100968.14	ENST00000553708.5	5367	9	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_5	13.0521789368672	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAACTCAATATTTTTTG	162	False	NA	6	True	AATAAA	-22	NA	24368340	24379604	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24368441_24369498_24370595_24372440_24372604_24373170_24373371_24373694_24373868_24374325_24374467_24375659_24375716_24375974_24376102_24376293
H1_mix_00026009	chr14	+	911	2	FSM	ENSG00000100441.10	ENST00000556510.1	911	2	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGAGCTGGCAGAGCGGC	162	False	NA	NA	False	NA	NA	NA	24430223	24431665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24430932_24431462
H1_mix_00026015	chr14	+	2070	25	FSM	ENSG00000092108.22	ENST00000678399.1	2062	25	-8	0	0	0	multi-exon	FALSE	canonical	1	1	junction_19	143.085056289374	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCCTTCTCTGTAACAG	NA	False	NA	NA	False	GATAAA	-32	NA	30622295	30735685	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707816_30707915_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
H1_mix_00026019	chr14	+	582	7	ISM	ENSG00000100473.18	ENST00000396618.9	2536	12	-45	10122	0	0	5prime_fragment	FALSE	canonical	3	131	junction_1	58.5510223840901	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAATCAAGATCTCCAT	5	True	NA	NA	False	AATAAA	-2	NA	30874513	30880496	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_+_30874592_30874915_30874973_30875055_30875104_30877571_30877729_30878810_30878945_30879422_30879486_30880451
H1_mix_00026021	chr14	+	2688	10	FSM	ENSG00000100473.18	ENST00000460581.6	2688	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	94.2726542181418	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGGCTTACTTTTATTA	1	True	NA	19	True	AATAAA	-20	NA	30874763	30890616	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_30875056_30877571_30877729_30878810_30878945_30879422_30879486_30880451_30880497_30880586_30880735_30884552_30884657_30885393_30885621_30885795_30886313_30889615
H1_mix_00026023	chr14	+	635	4	FSM	ENSG00000100473.18	ENST00000553833.5	635	4	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_2	15.2534149181967	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAATCAAGATCTCCAT	2573	False	NA	NA	False	AATAAA	-2	NA	30877335	30880496	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_30877729_30878810_30878945_30879422_30879486_30880451
H1_mix_00026025	chr14	+	240	3	FSM	ENSG00000100478.16	ENST00000556480.1	407	3	0	167	0	-167	multi-exon	FALSE	canonical	3	36	junction_1	3.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGAAATTGAGTCTCTTT	NA	False	NA	NA	False	NA	NA	NA	31066295	31073018	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_31066335_31069842_31069930_31072904
H1_mix_00026026	chr14	+	705	3	FSM	ENSG00000250365.7	ENST00000549844.5	699	3	-6	0	-6	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	247	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCAGTTCGTCTAATT	NA	False	NA	NA	False	ATTAAA	-34	NA	31420279	31439949	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_31420586_31421847_31421969_31439671
H1_mix_00026027	chr14	+	9602	7	FSM	ENSG00000100852.14	ENST00000539826.6	4881	7	-76	-4645	-58	0	multi-exon	FALSE	canonical	3	61	junction_1	43.844421918111	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGACTTCTGTTTAATTCC	631	False	NA	17	True	AATAAA	-20	NA	32076908	32159728	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_32077054_32090501_32094387_32117139_32117288_32146262_32146341_32149901_32150034_32152422_32152529_32154620
H1_mix_00026028	chr14	+	671	1	FSM	ENSG00000279423.1	ENST00000623080.1	671	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTGTGTAAATGTTAAGAA	NA	False	NA	NA	False	AATAAA	-31	NA	34541043	34541714	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_34541000_34541700
H1_mix_00026030	chr14	+	1009	1	FSM	ENSG00000226677.3	ENST00000554337.1	1009	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCTTCCCACAAATGAGA	NA	False	NA	NA	False	NA	NA	NA	34939323	34940332	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_34939300_34940300
H1_mix_00026031	chr14	+	2267	16	FSM	ENSG00000100883.13	ENST00000678963.1	2253	16	-14	0	-4	0	multi-exon	FALSE	canonical	2	3	junction_1	194.002565847866	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTATAAGTTAAGGGGTTG	-8	True	NA	25	True	AATAAA	-10	NA	34982686	35029554	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_34983004_34996676_34996788_34999557_34999650_35000935_35001021_35007282_35007388_35008626_35008694_35008773_35008832_35011508_35011660_35013345_35013495_35013801_35013903_35014743_35014831_35018691_35018766_35018965_35019075_35022909_35023081_35028087_35028184_35029060
H1_mix_00026034	chr14	+	6063	15	FSM	ENSG00000100883.13	ENST00000677621.1	6055	15	-8	0	0	0	multi-exon	FALSE	canonical	3	687	junction_11	53.9042991735145	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTATAAGTTAAGGGGTT	8	False	NA	24	True	AATAAA	-9	NA	34982962	35029553	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_34983216_34996676_34996788_34999557_34999650_35000935_35001021_35007282_35007388_35008626_35008694_35008773_35008832_35011508_35011660_35013345_35013495_35013801_35013903_35014743_35018766_35018965_35019075_35022909_35023081_35028087_35028184_35029060
H1_mix_00026035	chr14	+	516	2	FSM	ENSG00000151327.13	ENST00000553852.1	516	2	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCCTACTGTTGATCCG	101	False	NA	NA	False	AATATA	-43	NA	35046592	35053431	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_35046955_35053277
H1_mix_00026036	chr14	+	1978	1	FSM	ENSG00000279434.1	ENST00000624600.1	2025	1	-19	66	-19	-66	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGTTCCTGTATGGCCTG	NA	False	NA	NA	False	AATGAA	-25	NA	35086015	35087993	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_35086000_35088000
H1_mix_00026037	chr14	+	580	2	FSM	ENSG00000100890.16	ENST00000605201.1	578	2	-2	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGCACTCTTATGTCTCG	-27	True	NA	NA	False	NA	NA	NA	35122551	35123315	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_35122768_35122951
H1_mix_00026038	chr14	+	2659	8	NIC	ENSG00000100890.16	novel	6186	8	NA	NA	11	-31	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	94.03559899076	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCATTCTCTGTATGTTA	-4	True	NA	-67	True	NA	NA	NA	35122574	35273986	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_35122768_35122951_35124232_35126734_35126783_35127478_35127612_35180669_35180778_35266726_35266876_35270400_35270597_35273434
H1_mix_00026039	chr14	+	610	2	FSM	ENSG00000100902.11	ENST00000556167.1	601	2	-13	4	0	-4	multi-exon	FALSE	canonical	3	2764	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAGAAAAGAAAAAAG	-35	True	NA	NA	False	NA	NA	NA	35292381	35308432	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_35292553_35307993
H1_mix_00026041	chr14	+	764	2	FSM	ENSG00000259105.1	ENST00000555161.1	764	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCACTGGTCCTAGAATC	26	False	NA	NA	False	NA	NA	NA	35468271	35469330	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_35468906_35469200
H1_mix_00026043	chr14	+	2075	1	FSM	ENSG00000258708.1	ENST00000556667.1	1924	1	-79	-72	-79	72	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTCAGACTTTTTACTAA	-1	True	NA	94	True	GATAAA	-16	NA	37171808	37173883	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_37171800_37173900
H1_mix_00026044	chr14	+	6261	15	FSM	ENSG00000151338.19	ENST00000396294.6	6258	15	-3	0	-3	0	multi-exon	FALSE	canonical	2	6	junction_3	21.6621790224345	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACATATTTCAATGCAATT	-2	True	NA	8	True	AATAAA	-20	NA	37197909	37551258	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_37198105_37219552_37219692_37227725_37227839_37247102_37247241_37247828_37247908_37266937_37267170_37268657_37268794_37270419_37270526_37285317_37285448_37308055_37308090_37308348_37308520_37369516_37369625_37422854_37422950_37499907_37500139_37546904
H1_mix_00026045	chr14	+	7198	14	FSM	ENSG00000151338.19	ENST00000327441.11	7185	14	-13	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	20.0466910607513	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTACTCGTGTATTTACG	-18	True	NA	NA	False	AAGAAA	-42	NA	37197936	37552361	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_37198105_37227725_37227839_37247102_37247241_37247828_37247908_37266937_37267170_37268657_37268794_37270419_37270526_37285317_37285448_37308055_37308090_37308348_37308520_37369516_37369625_37422854_37422950_37499907_37500139_37546904
H1_mix_00026046	chr14	+	586	4	FSM	ENSG00000151338.19	ENST00000554114.1	595	4	9	0	9	0	multi-exon	FALSE	canonical	3	8	junction_1	29.3295452099452	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGCTCACAGCCTTAG	NA	False	NA	NA	False	AATACA	-2	NA	37240432	37267169	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_37240570_37247102_37247241_37247828_37247908_37266937
H1_mix_00026050	chr14	+	601	4	FSM	ENSG00000100941.9	ENST00000556530.1	601	4	0	0	0	0	multi-exon	FALSE	canonical	3	680	junction_1	23.0988215187606	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCTAGTGAAATAATGCAG	-14	True	NA	53	True	NA	NA	NA	39175229	39177708	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_39175393_39176077_39176150_39176526_39176596_39177411
H1_mix_00026051	chr14	+	3699	24	FSM	ENSG00000150527.18	ENST00000396158.6	3695	24	-4	0	-4	0	multi-exon	FALSE	canonical	3	3	junction_5	35.2514060103832	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCCCAGTTGGTTGTTT	-32	True	NA	NA	False	AATAAA	-16	NA	39267119	39351193	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_39267523_39276933_39277066_39279336_39279359_39279448_39279538_39291018_39291112_39293270_39293382_39293999_39294072_39294924_39295030_39299863_39299987_39302128_39302250_39303477_39303525_39304290_39304382_39308448_39308588_39313339_39313442_39314738_39314800_39315682_39315719_39317943_39318012_39319208_39319292_39320927_39321057_39326863_39327023_39345903_39346027_39347712_39347772_39348742_39348978_39350097
H1_mix_00026055	chr14	+	408	5	FSM	ENSG00000286099.1	ENST00000652650.1	630	5	222	0	222	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATCAAGCATCGTGATAA	NA	False	NA	NA	False	NA	NA	NA	40808380	40901855	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_40808418_40854946_40855055_40865081_40865237_40885663_40885743_40901826
H1_mix_00026057	chr14	+	204	1	FSM	ENSG00000259051.1	ENST00000554987.1	333	1	105	24	105	-24	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCATTATCCCCAAGGATA	NA	False	NA	NA	False	NA	NA	NA	43300367	43300571	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_43300400_43300600
H1_mix_00026058	chr14	+	3460	3	FSM	ENSG00000179476.8	ENST00000555826.5	3498	3	0	38	0	-38	multi-exon	FALSE	canonical	3	66	junction_2	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCTAATAAAAAAACATTTT	3081	False	NA	-22	True	NA	NA	NA	44900413	44907218	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_44900960_44903206_44903297_44904394
H1_mix_00026060	chr14	+	3196	15	FSM	ENSG00000185246.18	ENST00000424478.5	3174	15	-22	0	-1	0	multi-exon	FALSE	canonical	3	39	junction_3	96.4507117439699	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATGAATTTATTTTG	-10	True	NA	24	True	AATAAA	-21	NA	45084105	45115601	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_45084250_45095220_45095564_45096102_45096229_45096423_45096759_45096886_45097006_45102528_45102697_45107450_45107617_45108414_45108523_45109615_45109781_45110093_45110221_45110548_45110818_45112317_45112503_45114182_45114258_45114493_45114615_45114856
H1_mix_00026062	chr14	+	3223	14	FSM	ENSG00000185246.18	ENST00000554081.5	3223	14	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	118.792395110523	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGCCTCTCCCCTACCC	9326	False	NA	NA	False	NA	NA	NA	45096197	45116282	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_45096229_45096595_45096759_45096886_45097006_45102528_45102697_45107450_45107617_45108414_45108523_45109615_45109781_45109893_45109994_45110093_45110221_45110548_45110818_45112317_45112503_45114182_45114258_45114493_45114615_45114856
H1_mix_00026064	chr14	+	943	3	Antisense	novelGene_ENSG00000139915.21_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_1	5.5	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGTCTGTTTGGTGCT	NA	False	NA	NA	False	AATAAA	-16	NA	47104593	47108723	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr14_+_47104830_47106444_47106733_47108304
H1_mix_00026065	chr14	+	1660	3	Antisense	novelGene_ENSG00000139915.21_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_2	6	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGTCTGTTTGGTGCTCT	NA	False	NA	NA	False	AATAAA	-18	NA	47104707	47108725	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr14_+_47104830_47106444_47106733_47107475
H1_mix_00026066	chr14	+	322	2	Genic_Genomic	ENSG00000276168.1	novel	299	1	NA	NA	-56788	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAACAATAAATACGTTA	NA	False	NA	-12	True	NA	NA	NA	49529791	49586878	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr14_+_49529818_49586582
H1_mix_00026067	chr14	+	341	2	Genic_Genomic	ENSG00000276168.1	novel	299	1	NA	NA	-23218	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAACAATAAATACGTTA	NA	False	NA	-12	True	NA	NA	NA	49563361	49586878	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr14_+_49563404_49586579
H1_mix_00026068	chr14	+	421	2	Genic_Genomic	ENSG00000276168.1	novel	299	1	NA	NA	-17858	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAACAATAAATACGTTA	NA	False	NA	-12	True	NA	NA	NA	49568721	49586878	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr14_+_49568843_49586578
H1_mix_00026069	chr14	+	791	4	FSM	ENSG00000165516.11	ENST00000557063.5	827	4	36	0	-14	0	multi-exon	FALSE	canonical	3	595	junction_2	34.4512538072113	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAAGGTCTCTTTTTTCA	9018	False	NA	NA	False	TATAAA	-32	NA	49777838	49780103	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_49777955_49778177_49778260_49778410_49778495_49779594
H1_mix_00026071	chr14	+	1318	1	FSM	ENSG00000278002.1	ENST00000618845.1	1308	1	-39	29	-39	-29	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGTAATAAATTCTCAAG	358	False	NA	NA	False	NA	NA	NA	49863032	49864350	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_49863000_49864400
H1_mix_00026073	chr14	+	544	3	ISM	ENSG00000125375.18	ENST00000555939.6	719	5	19	1811	14	3	5prime_fragment	FALSE	canonical	3	220	junction_1	44	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCCTCTCCTTCCTCCTC	13	True	NA	14	True	ATTAAA	-16	NA	50312342	50322895	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_+_50312390_50321482_50321595_50322510
H1_mix_00026076	chr14	+	2182	14	FSM	ENSG00000198513.14	ENST00000556478.3	3844	14	218	1444	99	0	multi-exon	FALSE	canonical	2	5	junction_1	10.2610886765685	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTATAAAGTATTTGTCTA	NA	False	NA	-22	True	NA	NA	NA	50532726	50632573	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_50532874_50560126_50560300_50587830_50588079_50590940_50591076_50591534_50591640_50593845_50593897_50595575_50595633_50613258_50613352_50614372_50614512_50620598_50620727_50621842_50621900_50623176_50623249_50628030_50628463_50632228
H1_mix_00026077	chr14	+	1580	12	FSM	ENSG00000131969.15	ENST00000382029.7	1580	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	97.8294180771935	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTATGCCATTTTGT	41	False	NA	21	True	AATAAA	-21	NA	50872159	50904970	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_50872279_50878744_50878848_50880451_50880572_50881595_50881627_50885613_50885660_50885765_50885896_50886646_50886685_50888823_50888904_50901828_50901912_50903388_50903468_50904073_50904193_50904338
H1_mix_00026078	chr14	+	3659	8	NIC	ENSG00000131969.15	novel	1477	11	NA	NA	0	0	intron_retention	FALSE	canonical	2	7	junction_3	103.28522031101	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTATGCCATTTTGT	NA	False	NA	21	True	AATAAA	-21	NA	50885777	50904970	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_50885896_50886646_50886685_50888823_50888904_50893212_50895723_50901828_50901912_50903388_50903468_50904073_50904193_50904338
H1_mix_00026086	chr14	+	3156	3	FSM	ENSG00000100519.12	ENST00000557557.1	2939	3	-212	-5	-212	0	multi-exon	FALSE	canonical	3	5	junction_1	541	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATATTCTTGTCTTTTCTG	NA	False	NA	14	True	AATAAA	-27	NA	52721287	52727995	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_52723875_52723964_52724037_52727498
H1_mix_00026087	chr14	+	283	1	FSM	ENSG00000271075.1	ENST00000605879.1	760	1	202	275	202	-275	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGACAAAACTGTGTGAG	NA	False	NA	NA	False	NA	NA	NA	52871659	52871942	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_52871700_52871900
H1_mix_00026088	chr14	+	1557	4	FSM	ENSG00000237356.7	ENST00000456100.6	2163	4	0	606	0	-540	multi-exon	FALSE	canonical	1	2	junction_2	7.87400787401181	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCTCTGGCTCATAGATG	234	False	NA	NA	False	NA	NA	NA	53217888	53688430	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_53218056_53318030_53318139_53369451_53369502_53687198
H1_mix_00026090	chr14	+	235	1	FSM	ENSG00000237356.7	ENST00000612453.1	432	1	192	5	192	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGATCACTGTTTTGGTTT	NA	False	NA	-2	True	ATTAAA	-10	NA	53591134	53591369	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_53591100_53591400
H1_mix_00026091	chr14	+	583	6	FSM	ENSG00000100526.21	ENST00000555837.5	689	6	106	0	-24	0	multi-exon	FALSE	canonical	3	113	junction_1	273.945542033449	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGAGGTGGGCGGTGCT	0	True	NA	NA	False	AATACA	-11	NA	54396954	54417951	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_54397078_54401523_54401580_54408744_54408790_54411483_54411707_54415898_54415931_54417847
H1_mix_00026094	chr14	+	719	4	FSM	ENSG00000100532.13	ENST00000554791.5	719	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	123.002258335185	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATTTTCAGCAGTGCCC	NA	False	NA	NA	False	NA	NA	NA	54509811	54538281	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_54510064_54522453_54522594_54537721_54537830_54538062
H1_mix_00026095	chr14	+	2374	6	NNC	ENSG00000100532.13	novel	1962	6	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	116.79143804235	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTTATTCATCCATTGT	NA	False	NA	15	True	AATAAA	-25	NA	54509855	54539292	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_54510064_54522453_54522598_54530048_54530585_54530902_54531051_54537721_54537830_54538062
H1_mix_00026098	chr14	+	1963	6	FSM	ENSG00000100532.13	ENST00000556216.5	1827	6	-136	0	-46	0	multi-exon	FALSE	canonical	3	59	junction_3	86.636251073093	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGAGTTTGGCCTTTTA	NA	False	NA	23	True	CATAAA	-25	NA	54509765	54538616	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_54510064_54522453_54522594_54530048_54530764_54530902_54531051_54537721_54537830_54538062
H1_mix_00026099	chr14	+	1942	6	NNC	ENSG00000100532.13	novel	1962	6	NA	NA	10	-8	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	109.339837204927	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGTAAATTACTTTATTCA	0	True	NA	7	True	AATAAA	-17	NA	54509921	54539284	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_54510064_54522453_54522598_54530048_54530227_54530902_54531051_54537721_54537830_54538062
H1_mix_00026101	chr14	+	5788	3	NIC	ENSG00000168175.15	novel	6466	4	NA	NA	11	47	intron_retention	FALSE	canonical	3	57	junction_1	501	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCATGTTATTTTATTC	-15	True	NA	60	True	TTTAAA	-26	NA	55051657	55069549	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_55051804_55062617_55063326_55064615
H1_mix_00026102	chr14	+	3530	3	FSM	ENSG00000178974.11	ENST00000681904.1	3515	3	-15	0	11	0	multi-exon	FALSE	canonical	1	3	junction_2	2	267	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTTAAATGGAACCCAAGT	5875	False	NA	-2	True	AATAAA	-8	NA	55271354	55353598	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_55271538_55332816_55332946_55350380
H1_mix_00026103	chr14	+	4741	44	NIC	ENSG00000126777.18	novel	4793	46	NA	NA	17	-1	combination_of_known_junctions	FALSE	canonical	3	133	junction_1	250.293162886598	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACTTGACTTGTTCTAAT	1	True	NA	27	True	AATAAA	-16	NA	55580226	55684575	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_55580355_55601756_55601881_55612018_55612572_55616516_55616655_55617963_55618135_55619181_55619313_55627911_55628029_55629956_55630098_55633234_55633342_55634525_55634659_55636448_55636537_55637197_55637365_55637778_55637848_55639184_55639223_55639912_55640004_55640373_55640443_55640932_55640971_55641126_55641209_55641691_55641761_55646972_55647008_55648024_55648116_55648801_55648871_55649775_55649814_55650327_55650419_55650568_55650638_55651889_55651928_55652849_55652941_55653016_55653086_55653558_55653597_55656041_55656133_55658545_55658615_55659665_55659704_55661521_55661613_55667240_55667331_55670728_55670810_55671565_55671656_55671784_55671878_55672629_55672702_55672928_55673013_55673171_55673256_55675834_55675919_55678351_55678445_55679564_55679686_55684098
H1_mix_00026104	chr14	+	4633	43	NIC	ENSG00000126777.18	novel	4793	46	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	46	junction_33	272.482457984541	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGACTTGTTCTAATT	20	True	NA	28	True	AATAAA	-17	NA	55580245	55684576	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_55580355_55601756_55601881_55612018_55612572_55616516_55616655_55617963_55618135_55619181_55619313_55627911_55628029_55629956_55630098_55633234_55633342_55634525_55634659_55636448_55636537_55637197_55637365_55637778_55637848_55639184_55639223_55639912_55640004_55640373_55640443_55640932_55640971_55641126_55641209_55641691_55641761_55646972_55647008_55648024_55648116_55648801_55648871_55649775_55649814_55650327_55650419_55650568_55650638_55651889_55651928_55652849_55652941_55653016_55653086_55653558_55653597_55656041_55656133_55658545_55658615_55659665_55659704_55661521_55661613_55670728_55670810_55671565_55671656_55671784_55671878_55672629_55672702_55672928_55673013_55673171_55673256_55675834_55675919_55678351_55678445_55679564_55679686_55684098
H1_mix_00026105	chr14	+	4866	46	FSM	ENSG00000126777.18	ENST00000459737.5	4793	46	-76	3	-8	0	multi-exon	FALSE	canonical	3	53	junction_45	282.601926548438	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGACTTGTTCTAATT	20	True	NA	28	True	AATAAA	-17	NA	55580245	55684576	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_55580355_55601756_55601881_55612018_55612572_55616516_55616655_55617963_55618135_55619181_55619313_55627911_55628029_55629956_55630098_55633234_55633342_55634525_55634659_55636448_55636537_55637197_55637365_55637778_55637848_55639184_55639223_55639912_55640004_55640373_55640443_55640932_55640971_55641126_55641209_55641691_55641761_55646972_55647008_55648024_55648116_55648801_55648871_55649775_55649814_55650327_55650419_55650568_55650638_55651889_55651928_55652849_55652941_55653016_55653086_55653558_55653597_55656041_55656133_55658545_55658615_55659665_55659704_55661521_55661613_55663954_55664042_55667240_55667331_55670728_55670810_55671565_55671656_55671784_55671878_55672629_55672702_55672928_55673013_55673171_55673256_55675834_55675919_55678351_55678445_55679564_55679686_55680685_55680742_55684098
H1_mix_00026106	chr14	+	4516	42	FSM	ENSG00000126777.18	ENST00000395311.5	4516	42	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_23	236.332082171788	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGACTTGTTCTAATTTTT	NA	False	NA	31	True	AATAAA	-20	NA	55601791	55684579	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_55601881_55612018_55612572_55616516_55616655_55617963_55618135_55619181_55619313_55627911_55628029_55629956_55630098_55633234_55633342_55634525_55634659_55636448_55636537_55637197_55637365_55637778_55637848_55639184_55639223_55639912_55640004_55640373_55640443_55640932_55640971_55641126_55641209_55641691_55641761_55646972_55647008_55648024_55648116_55648801_55648871_55649775_55649814_55650327_55650419_55651889_55651928_55652849_55652941_55653016_55653086_55653558_55653597_55656041_55656133_55658545_55658615_55659665_55659704_55661521_55661613_55663954_55664042_55667240_55667331_55670728_55670810_55671565_55671656_55671784_55671878_55672629_55672702_55672928_55673013_55675834_55675919_55678351_55678445_55679564_55679686_55684098
H1_mix_00026107	chr14	+	4431	41	FSM	ENSG00000126777.18	ENST00000413890.6	4473	41	42	0	42	0	multi-exon	FALSE	canonical	3	55	junction_22	208.25257351351	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTCTAATTTTTATTG	-18	True	NA	35	True	AATAAA	-24	NA	55612018	55684583	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_55612572_55616516_55616655_55617963_55618135_55619181_55619313_55627911_55628029_55629956_55630098_55633234_55633342_55634525_55634659_55636448_55636537_55637197_55637365_55637778_55637848_55639184_55639223_55639912_55640004_55640373_55640443_55640932_55640971_55641126_55641209_55641691_55641761_55646972_55647008_55648024_55648116_55648801_55648871_55649775_55649814_55650327_55650419_55651889_55651928_55652849_55652941_55653016_55653086_55653558_55653597_55656041_55656133_55658545_55658615_55659665_55659704_55661521_55661613_55663954_55664042_55667240_55667331_55670728_55670810_55671565_55671656_55671784_55671878_55672629_55672702_55672928_55673013_55675834_55675919_55678351_55678445_55679564_55679686_55684098
H1_mix_00026121	chr14	+	447	1	FSM	ENSG00000258758.1	ENST00000556703.1	1620	1	499	674	499	-674	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGGAGGCAATATCACCT	NA	False	NA	NA	False	NA	NA	NA	57041383	57041830	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_57041400_57041800
H1_mix_00026122	chr14	+	817	4	FSM	ENSG00000053770.12	ENST00000555448.5	817	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	119.9342412417	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCAAGTTTTATTTATT	-37	True	NA	NA	False	NA	NA	NA	57269025	57283019	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_57269389_57280194_57280423_57282088_57282229_57282933
H1_mix_00026123	chr14	+	2485	8	NNC	ENSG00000053770.12	novel	11675	8	NA	NA	-6	-371	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	89.4281150148097	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGCTCTTGCTGTGTCTT	-13	True	NA	9	True	TTTAAA	-17	NA	57269049	57289703	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_57269389_57274243_57274818_57280194_57280423_57282088_57282229_57282933_57283020_57283111_57283231_57286222_57286320_57288801
H1_mix_00026130	chr14	+	542	1	FSM	ENSG00000180189.10	ENST00000557424.1	591	1	-61	110	-61	-110	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCCTGATGCAGCGAAAA	NA	False	NA	NA	False	AATACA	-32	NA	58284711	58285253	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_58284700_58285300
H1_mix_00026132	chr14	+	591	6	FSM	ENSG00000100578.18	ENST00000554463.5	582	6	-9	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	19.5918350340135	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAACACCTGCAACGTGT	6	True	NA	NA	False	AGTAAA	-13	NA	58427718	58444019	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_58427858_58429362_58429434_58430647_58430718_58432387_58432458_58442705_58442881_58443953
H1_mix_00026133	chr14	+	4154	17	FSM	ENSG00000100578.18	ENST00000652414.1	4160	17	0	6	0	-6	multi-exon	FALSE	canonical	3	5	junction_16	19.5359244406299	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAATTTGGGAGTTTTGT	NA	False	NA	8	True	AATAAA	-17	NA	58460997	58515816	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_58461161_58465834_58466030_58467734_58467923_58470612_58470724_58472198_58472280_58474606_58474798_58477122_58477242_58482512_58482713_58487006_58487167_58487886_58488110_58488620_58488875_58490163_58490241_58492143_58492276_58498782_58498961_58508554_58508710_58512521_58512628_58514195
H1_mix_00026134	chr14	+	814	5	FSM	ENSG00000100578.18	ENST00000555397.1	814	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	36.155048056945	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAAGTCTGATTGTGAGT	NA	False	NA	NA	False	AATAAA	-15	NA	58490204	58548119	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_58490241_58498782_58498961_58508554_58508710_58512521_58512628_58547780
H1_mix_00026135	chr14	+	1321	1	FSM	ENSG00000258900.1	ENST00000556181.1	766	1	-270	-285	-270	285	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACTGTCTCCAAAATAAT	NA	False	NA	3	True	AATAAA	-19	NA	58520952	58522273	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_58521000_58522300
H1_mix_00026136	chr14	+	943	4	FSM	ENSG00000165617.15	ENST00000421793.5	993	4	50	0	50	0	multi-exon	FALSE	canonical	1	1	junction_1	34.1207007873845	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTCTCCCCACCGAAGCA	66	False	NA	NA	False	NA	NA	NA	58634130	58645856	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_58634186_58640735_58640869_58641591_58641748_58645257
H1_mix_00026139	chr14	+	2526	8	FSM	ENSG00000050130.18	ENST00000356057.9	2524	8	-2	0	-2	0	multi-exon	FALSE	canonical	1	1	junction_2	284.656040203769	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAATCCTCAATTGAGTA	255	False	NA	69	True	ATTAAA	-15	NA	59484440	59505404	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_59484594_59484989_59485117_59486730_59486805_59487673_59487829_59495017_59495225_59498726_59498909_59501190_59501268_59503853
H1_mix_00026140	chr14	+	611	5	FSM	ENSG00000050130.18	ENST00000557560.5	611	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	287.371275530454	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACGATGCTTTACAACCCAA	-32	True	NA	NA	False	NA	NA	NA	59484491	59495152	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_59484594_59484989_59485117_59486712_59486805_59487673_59487829_59495017
H1_mix_00026142	chr14	+	1215	7	FSM	ENSG00000050130.18	ENST00000553941.5	1191	7	-24	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	237.317941916652	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTAATATTATCTGCTACA	21	True	NA	NA	False	NA	NA	NA	59484544	59504274	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_59484594_59486680_59486805_59487673_59487829_59495017_59495225_59498726_59498909_59501190_59501268_59503853
H1_mix_00026146	chr14	+	525	1	FSM	ENSG00000258427.3	ENST00000555532.2	525	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTCCTCTGTTGTCCAGG	31	False	NA	NA	False	NA	NA	NA	60397756	60398281	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_60397800_60398300
H1_mix_00026147	chr14	+	1195	8	NNC	ENSG00000020426.11	novel	680	5	NA	NA	-11647	1	intron_retention	FALSE	canonical	3	30	junction_1	143.79151574415	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCTGTGGTTTTTCTCTT	2	False	NA	12	True	AATAAA	-17	NA	60723094	60968679	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_60723119_60796216_60796370_60798086_60798161_60808324_60808429_60811986_60812128_60818721_60818848_60879713_60879836_60968228
H1_mix_00026151	chr14	+	583	9	FSM	ENSG00000139974.16	ENST00000533744.6	583	9	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_2	26.6549127741961	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAAGAATGCAGAATG	72	False	NA	NA	False	NA	NA	NA	60982556	61046072	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_60982639_60984729_60984804_61030444_61030524_61037058_61037142_61037624_61037684_61043146_61043213_61043449_61043504_61045345_61045426_61046066
H1_mix_00026154	chr14	+	743	4	FSM	ENSG00000139973.18	ENST00000636133.1	740	4	-3	0	-3	0	multi-exon	FALSE	canonical	0	0	junction_1	0.816496580927726	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGTTATTTGTTTTTCAT	-2	True	NA	NA	False	NA	NA	NA	61812717	62075391	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_61812811_61970131_61970312_62069602_62069816_62075134
H1_mix_00026155	chr14	+	807	3	FSM	ENSG00000274015.3	ENST00000665010.1	921	3	-17	131	-17	-130	multi-exon	FALSE	canonical	1	4	junction_2	26	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCAATTATGTTTCTCA	662	False	NA	NA	False	NA	NA	NA	63642017	63665462	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_63642198_63651331_63651420_63664923
H1_mix_00026156	chr14	+	10146	59	NIC	ENSG00000054654.20	novel	11095	63	NA	NA	5895	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_6	44.064638096311	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTCTGTTGTACTGAAT	NA	False	NA	12	True	ATTAAA	-15	NA	64081509	64226430	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_64081581_64087670_64087857_64089573_64089697_64090865_64091049_64093348_64093481_64097948_64098147_64098746_64098822_64101931_64102043_64107490_64107608_64113340_64113572_64119426_64119610_64120926_64121062_64122011_64122134_64122285_64122428_64125078_64125211_64126326_64126480_64126597_64126808_64128451_64128554_64129781_64129902_64130047_64130249_64132264_64132439_64134068_64134201_64137786_64137984_64139940_64140074_64141340_64141524_64141941_64142089_64143771_64143949_64146067_64146224_64152563_64152717_64158624_64158796_64159311_64159443_64162071_64162277_64163401_64163582_64165284_64165411_64167232_64167388_64167494_64167640_64168876_64168972_64170227_64170463_64174943_64175139_64177357_64177484_64186423_64186580_64188549_64188709_64190070_64190238_64202800_64202964_64208757_64208946_64209427_64209579_64209941_64210125_64211960_64212099_64212810_64213006_64214193_64214471_64216247_64216388_64218397_64218513_64219207_64219411_64220436_64220638_64221575_64221705_64223188_64223381_64224460_64224548_64224998_64225046_64225318
H1_mix_00026159	chr14	+	2355	10	ISM	ENSG00000054654.20	ENST00000554805.6	3481	14	5228	-3	204	0	3prime_fragment	FALSE	canonical	3	83	junction_8	22.8121691587713	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTTGTACTGAATTCT	166	False	NA	15	True	ATTAAA	-18	NA	64214347	64226433	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_+_64214471_64216247_64216388_64218397_64218513_64219207_64219411_64220436_64220638_64221575_64221705_64223188_64223381_64224460_64224548_64224995_64225046_64225318
H1_mix_00026160	chr14	+	2063	16	FSM	ENSG00000100714.17	ENST00000555709.7	2063	16	0	0	0	0	multi-exon	FALSE	canonical	2	48	junction_6	392.073405825434	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACTATAACATTTATTTTA	-24	True	NA	NA	False	GATAAA	-18	NA	64388310	64439581	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_64388469_64400792_64400878_64411089_64411150_64412471_64412526_64415357_64415495_64415638_64415740_64419813_64419926_64424803_64424932_64425729_64425828_64426018_64426193_64427336_64427474_64430183_64430231_64431531_64431640_64431786_64431862_64435568_64435672_64439095
H1_mix_00026162	chr14	+	3091	26	FSM	ENSG00000100714.17	ENST00000557370.3	3082	26	-9	0	0	0	multi-exon	FALSE	canonical	3	1366	junction_8	106.63324809833	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGGGGTAGTGCTAACAT	18	True	NA	47	True	NA	NA	NA	64388352	64455173	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_64388469_64400792_64400878_64411089_64411150_64412471_64412526_64415357_64415495_64415638_64415740_64417887_64418025_64419813_64419926_64424803_64424932_64425729_64425828_64426018_64426193_64427336_64427474_64430183_64430231_64431531_64431640_64431786_64431862_64435568_64435672_64439095_64439173_64440125_64440267_64441384_64441454_64442053_64442166_64442262_64442403_64444692_64444735_64448216_64448318_64449444_64449623_64453753_64453862_64454722
H1_mix_00026163	chr14	+	4528	27	FSM	ENSG00000100714.17	ENST00000650853.1	4528	27	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_16	510.150030142543	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAAACAAGTTTGCCAT	18	True	NA	-2	True	CATAAA	-41	NA	64388352	64459986	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_64388469_64400792_64400878_64411089_64411150_64412471_64412526_64415357_64415495_64415638_64415740_64417887_64418025_64419813_64419926_64424803_64424932_64425729_64425828_64426018_64426193_64427336_64427474_64430183_64430231_64431531_64431640_64431786_64431862_64435568_64435672_64440125_64441454_64442053_64442166_64442262_64442403_64444692_64444735_64448216_64448318_64449444_64449623_64453753_64453862_64454722_64454876_64458213_64458308_64458874_64459247_64459758
H1_mix_00026166	chr14	+	6409	2	FSM	ENSG00000179841.8	ENST00000394718.4	6487	2	2	76	2	-76	multi-exon	FALSE	canonical	2	3	junction_1	0	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGTAGAAAAAAGGTTTCA	0	True	NA	-72	True	ATTAAA	-7	NA	64465500	64474427	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_64465614_64468131
H1_mix_00026167	chr14	+	589	2	FSM	ENSG00000126804.14	ENST00000553583.1	582	2	-7	0	6	0	multi-exon	FALSE	canonical	0	0	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACAGGTGGTGTGCAGAG	-7	True	NA	NA	False	AATGAA	-2	NA	64503717	64521970	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_64503823_64521486
H1_mix_00026168	chr14	+	4029	3	NIC	ENSG00000126804.14	novel	629	4	NA	NA	50	89	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	3.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGATTCTGAACACTAATAG	312	False	NA	NA	False	TATAAA	-4	NA	64504623	64525040	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_64504947_64516599_64516752_64521486
H1_mix_00026169	chr14	+	4992	18	NIC	ENSG00000126822.18	novel	4702	17	NA	NA	-13	0	combination_of_known_junctions	TRUE	canonical	3	26	junction_15	12.6077364067083	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCACTATGTGTGAACTC	-26	True	NA	15	True	NA	NA	NA	64704410	64744339	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_64704705_64727592_64727983_64728995_64729094_64730242_64730313_64730641_64730689_64730798_64730950_64731037_64731170_64731360_64731544_64731713_64731807_64732094_64732182_64732426_64732461_64732802_64732902_64736852_64736892_64737355_64737376_64737861_64738225_64738741_64738856_64741035_64742456_64742981
H1_mix_00026171	chr14	+	1419	12	NNC	ENSG00000257365.8	novel	2622	10	NA	NA	2870	131	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	31.5330077619056	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCACGTGGTGTGGTTGGT	3194	False	NA	NA	False	TTTAAA	-37	NA	64990084	65061536	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_64990110_65004248_65004314_65012316_65012390_65015624_65015717_65027452_65027600_65027697_65027782_65032609_65032697_65040789_65040920_65044310_65044444_65053237_65053350_65054574_65054690_65061180
H1_mix_00026172	chr14	+	3575	22	FSM	ENSG00000171723.16	ENST00000315266.9	4193	22	618	0	-113	0	multi-exon	FALSE	canonical	1	1	junction_7	16.0493852355755	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGTAATGTGTTGGCC	NA	False	NA	19	True	AATAAA	-22	NA	66508024	67181798	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_66508592_66681106_66681186_66776463_66776522_66824473_66824567_66879938_66880034_66916002_66916070_66922665_66922939_66965190_66965326_67023632_67023676_67058648_67058787_67088982_67089076_67100855_67100912_67110139_67110260_67111860_67111920_67113017_67113172_67122255_67122378_67143361_67143450_67159414_67159489_67165161_67165227_67168932_67169037_67179577_67179675_67180803
H1_mix_00026174	chr14	+	5625	22	FSM	ENSG00000054690.14	ENST00000558386.5	3383	22	-312	-1930	-312	0	multi-exon	FALSE	canonical	3	42	junction_2	13.87750100031	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCGTCTTTTGTAGGAC	4969	False	NA	28	True	AATAAA	-35	NA	67568720	67589611	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_67569217_67569920_67570013_67571751_67571903_67572134_67572278_67573275_67573387_67573800_67573888_67574241_67574404_67575391_67575473_67575822_67576006_67576394_67576504_67577301_67577415_67578022_67578200_67578533_67578632_67579133_67579312_67579720_67579877_67580937_67581039_67582068_67582211_67583740_67583884_67583994_67584125_67585567_67585655_67585950_67586098_67587073
H1_mix_00026177	chr14	+	852	5	FSM	ENSG00000081181.8	ENST00000557120.5	836	5	-16	0	0	0	multi-exon	FALSE	canonical	3	386	junction_2	50.2468904510518	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAGTTTTATTTTAAAGAA	0	True	NA	NA	False	TTTAAA	-28	NA	67619919	67646915	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_67620089_67620893_67620967_67642185_67642364_67645642_67645803_67646643
H1_mix_00026178	chr14	+	457	4	FSM	ENSG00000081181.8	ENST00000556491.1	457	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	189.753055896927	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGATGCATTTGGCTGA	16	False	NA	NA	False	NA	NA	NA	67619979	67646740	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_67620089_67620893_67620967_67642185_67642364_67646643
H1_mix_00026179	chr14	+	639	4	FSM	ENSG00000081181.8	ENST00000557319.1	627	4	-12	0	-12	0	multi-exon	FALSE	canonical	3	369	junction_2	89.9592500339274	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGCTTCAAGCTTTGGTC	NA	False	NA	NA	False	NA	NA	NA	67646435	67650808	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_67646739_67646920_67647026_67648046_67648184_67650714
H1_mix_00026180	chr14	+	363	1	FSM	ENSG00000258759.1	ENST00000557141.1	606	1	126	117	126	-117	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGACAAAAGGATCGGCAAAA	NA	False	NA	NA	False	GGGGCT	-41	NA	67799129	67799492	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_67799100_67799500
H1_mix_00026181	chr14	+	1861	11	NIC	ENSG00000182185.19	novel	1559	11	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_10	13.5944841755765	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTGCATTTTGTTCATT	9	True	NA	3	True	NA	NA	NA	67819788	68497881	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_67819854_67823541_67823628_67825463_67825578_67835079_67835197_67865002_67865140_67885868_67885989_67887020_67887205_68291883_68291981_68411423_68411528_68468171_68468251_68497123
H1_mix_00026185	chr14	+	2023	1	FSM	ENSG00000258531.2	ENST00000553684.2	263	1	-1177	-583	-1177	583	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGAGAATAAAATAAGATAT	NA	False	NA	NA	False	AATAAA	-45	NA	68935424	68937447	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_68935400_68937400
H1_mix_00026186	chr14	+	289	1	FSM	ENSG00000276063.1	ENST00000622466.1	494	1	-92	297	-92	-297	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGCAAATGTTTCATATAA	NA	False	NA	NA	False	NA	NA	NA	69154218	69154507	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_69154200_69154500
H1_mix_00026189	chr14	+	944	5	FSM	ENSG00000029364.12	ENST00000556125.5	944	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	45.0388720995542	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGCAGGTAGGGTTGGA	NA	False	NA	NA	False	NA	NA	NA	69398014	69453300	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_69398451_69424093_69424203_69441831_69441973_69442068_69442267_69453240
H1_mix_00026190	chr14	+	1264	8	FSM	ENSG00000029364.12	ENST00000538956.5	1264	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	70.6090125484079	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGACATTTTGCGTTTT	5	True	NA	NA	False	TTTAAA	-4	NA	69398389	69458827	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_69398451_69424093_69424203_69441831_69441973_69442068_69442267_69453240_69453310_69454811_69454898_69455731_69455867_69458362
H1_mix_00026191	chr14	+	3703	8	FSM	ENSG00000029364.12	ENST00000628474.2	3701	8	-2	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	63.9910708056768	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGGTTTGGACAGTAG	-7	True	NA	9	True	AATAAA	-18	NA	69398689	69460551	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_69399466_69424093_69424203_69441831_69441973_69442068_69442267_69453240_69453310_69454811_69454898_69455731_69455867_69458362
H1_mix_00026192	chr14	+	2065	7	FSM	ENSG00000029364.12	ENST00000556605.5	2065	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	50.6524102749974	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGAGTGGCTCATTACT	-7	True	NA	24	True	ATTAAA	-21	NA	69398689	69462388	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_69399466_69424093_69424203_69442068_69442267_69453240_69453310_69454811_69454898_69455731_69455867_69461696
H1_mix_00026193	chr14	+	2206	8	NIC	ENSG00000029364.12	novel	3701	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_7	65.6732791311408	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTGGCTCATTACTTA	-5	True	NA	26	True	ATTAAA	-23	NA	69398691	69462390	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_69399466_69424093_69424203_69441831_69441973_69442068_69442267_69453240_69453310_69454811_69454898_69455731_69455867_69461696
H1_mix_00026195	chr14	+	1437	6	FSM	ENSG00000029364.12	ENST00000557046.1	855	6	-632	50	0	0	multi-exon	FALSE	canonical	3	14	junction_3	55.1905789061865	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGGTTGCCTCATCCCT	41	False	NA	NA	False	NA	NA	NA	69398737	69458543	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_69399466_69424093_69424203_69442068_69442267_69454811_69454898_69455731_69455867_69458362
H1_mix_00026196	chr14	+	645	2	FSM	ENSG00000100650.16	ENST00000557435.1	622	2	-23	0	0	0	multi-exon	FALSE	canonical	3	1341	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGATGCAGATGATGCTGTG	NA	False	NA	NA	False	NA	NA	NA	69767092	69768619	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_69767256_69768137
H1_mix_00026197	chr14	+	632	6	FSM	ENSG00000100650.16	ENST00000553369.5	613	6	-19	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	710.653389494485	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGCCAGTCAGCTCC	NA	False	NA	90	True	NA	NA	NA	69767092	69769594	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_69767256_69768137_69768283_69768603_69768675_69768797_69768897_69769181_69769252_69769510
H1_mix_00026198	chr14	+	1492	8	NIC	ENSG00000100650.16	novel	1496	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	433	junction_1	477.188192884706	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGTCTGTTTGTCTGA	13	True	NA	14	True	AATAAA	-15	NA	69767141	69772005	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_69767252_69768137_69768283_69768603_69768675_69768797_69768897_69769181_69769252_69770466_69770541_69770994_69771106_69771193
H1_mix_00026200	chr14	+	2443	7	FSM	ENSG00000100650.16	ENST00000556184.5	2443	7	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	613.651819483619	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGTATTAAATGTCTTT	7	False	NA	-4	True	NA	NA	NA	69767171	69771642	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_69767381_69768137_69768283_69768603_69768675_69768797_69768897_69769181_69770541_69770994_69771106_69771193
H1_mix_00026201	chr14	+	1873	7	FSM	ENSG00000100650.16	ENST00000556587.5	1863	7	-10	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	743.570533903065	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGTCTGTTTGTCTGA	7	False	NA	14	True	AATAAA	-15	NA	69767171	69772005	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_69767381_69768137_69768283_69768603_69768675_69768797_69769252_69770466_69770541_69770994_69771106_69771196
H1_mix_00026205	chr14	+	732	3	FSM	ENSG00000259153.3	ENST00000557691.2	732	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	17.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTCCTAATCTTGTGAA	1040	False	NA	21	True	AATAAA	-31	NA	70809840	70815403	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_70809940_70810325_70810666_70815110
H1_mix_00026206	chr14	+	1086	3	NNC	ENSG00000259153.3	novel	1019	2	NA	NA	61	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATATATATAATACATTCC	36	True	NA	9	True	AATAAA	-19	NA	70810002	70815391	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_70810675_70814226_70814360_70815110
H1_mix_00026207	chr14	+	1825	3	ISM	ENSG00000100731.16	ENST00000554879.5	4431	10	-363	49959	-363	-6392	5prime_fragment	FALSE	canonical	3	66	junction_2	20.5	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAATCAAAGCCCCAGTTA	NA	False	NA	NA	False	NA	NA	NA	70907041	70962879	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_+_70908004_70946914_70947124_70962225
H1_mix_00026208	chr14	+	6217	24	NIC	ENSG00000197555.10	novel	7952	24	NA	NA	-45	4	combination_of_known_junctions	FALSE	canonical	3	112	junction_1	44.3711788471676	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAATGTCTTTATTTTTT	NA	False	NA	23	True	AATAAA	-38	NA	71320403	71739405	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_71320504_71321121_71321182_71512742_71512846_71529311_71529371_71587570_71589371_71618756_71618888_71624047_71624237_71650334_71650510_71658332_71658437_71661309_71661468_71671118_71671693_71672347_71672623_71685361_71685632_71698980_71699128_71702380_71702506_71705221_71705341_71709221_71709665_71723646_71723887_71724669_71724836_71730054_71730302_71733665_71733813_71735276_71735392_71738243_71738326_71739017
H1_mix_00026209	chr14	+	7956	26	NIC	ENSG00000197555.10	novel	7952	24	NA	NA	13	-166	combination_of_known_junctions	FALSE	canonical	1	3	junction_3	80.4283929965034	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTGGTATTATTGCTT	-2	True	NA	13	True	AATAAA	-25	NA	71320488	71741043	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_71320553_71321121_71321182_71413947_71414015_71418129_71418197_71512742_71512846_71529311_71529371_71587570_71589371_71618756_71618888_71624047_71624237_71650334_71650510_71658332_71658437_71661309_71661468_71671118_71671693_71672347_71672623_71685361_71685632_71698980_71699128_71702380_71702506_71705221_71705341_71709221_71709665_71723646_71723887_71724669_71724836_71730054_71730302_71733665_71733813_71735276_71735392_71738240_71738326_71739017
H1_mix_00026211	chr14	+	7831	22	FSM	ENSG00000197555.10	ENST00000555818.5	7831	22	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_12	72.8525052990264	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGCCTTCTCTGCTTAT	NA	False	NA	33	True	AATAAA	-38	NA	71529324	71741229	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_71529371_71587570_71589371_71618756_71618888_71624047_71624237_71650334_71650510_71658332_71658437_71661309_71661468_71671118_71671693_71672347_71672623_71685361_71685632_71698980_71699128_71702380_71702506_71704720_71704784_71705221_71705341_71709221_71709665_71723646_71723887_71724669_71724836_71730054_71730302_71733665_71733813_71735276_71735392_71738240_71738326_71739017
H1_mix_00026213	chr14	+	3756	17	FSM	ENSG00000182732.18	ENST00000555571.5	1764	17	-307	-1685	-119	1288	multi-exon	TRUE	canonical	2	5	junction_16	3.45506874027131	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCCATCGCGGGCATTAG	137	False	NA	NA	False	NA	NA	NA	71932309	72564152	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_71932942_71964771_71964876_72352094_72352195_72454527_72454579_72458270_72458378_72459631_72459684_72465757_72465823_72470006_72470084_72472871_72472954_72474624_72474700_72476741_72476841_72478267_72478330_72495151_72495263_72510153_72510280_72518350_72518538_72536185_72536276_72562416
H1_mix_00026215	chr14	+	1855	14	FSM	ENSG00000119599.17	ENST00000509320.5	1872	14	17	0	4	0	multi-exon	FALSE	canonical	1	1	junction_6	26.4302140176305	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAAAAACGAAAAGCTTCT	-7	True	NA	NA	False	AAAAAG	-24	NA	72926467	72959121	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_72926544_72937970_72938071_72939801_72939903_72940251_72940378_72941744_72941825_72942993_72943097_72945887_72946028_72947141_72947192_72951797_72951878_72954160_72954263_72954385_72954484_72955522_72955697_72956385_72956501_72958611
H1_mix_00026217	chr14	+	396	2	FSM	ENSG00000119599.17	ENST00000557203.1	524	2	126	2	126	-2	multi-exon	FALSE	canonical	3	66	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACGTTGCCCATCCCTGTA	4857	False	NA	NA	False	NA	NA	NA	72942844	72946027	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_72943097_72945883
H1_mix_00026218	chr14	+	7104	19	NIC	ENSG00000119707.14	novel	6813	19	NA	NA	1	0	intron_retention	FALSE	canonical	3	54	junction_9	137.117548921435	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGGGACTCATATTCTT	11	True	NA	14	True	ATTAAA	-16	NA	73058547	73121313	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914_73097101_73099379_73099434_73099666_73099751_73100300_73103479_73105858_73106082_73106195_73106286_73107825_73107900_73109341_73109493_73110830_73111156_73111527_73111803_73112151_73112251_73114285_73114334_73119712
H1_mix_00026224	chr14	+	3995	27	NNC	ENSG00000100767.17	novel	4090	26	NA	NA	-1150	-227	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	13.3912450424515	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCGTCGACCAGCCAGAG	2	True	NA	NA	False	NA	NA	NA	73236346	73272527	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_73236636_73239772_73239833_73244643_73244760_73245635_73245697_73246072_73246176_73249983_73250115_73250906_73251031_73251485_73251567_73251663_73251837_73252017_73252142_73252648_73252776_73253753_73253962_73254512_73254696_73254876_73255019_73258978_73259060_73259268_73259546_73260708_73260830_73261155_73261295_73262349_73262828_73263644_73263783_73264210_73264336_73264587_73264727_73265369_73265508_73266500_73266629_73266722_73266832_73268556_73268724_73272494
H1_mix_00026226	chr14	+	516	5	FSM	ENSG00000140043.12	ENST00000555976.5	516	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	80.5248408877658	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCAAGCAATCCTCCCAC	-16	True	NA	NA	False	NA	NA	NA	73851927	73874627	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_73852005_73858815_73858900_73860538_73860658_73874022_73874215_73874583
H1_mix_00026227	chr14	+	1964	12	FSM	ENSG00000119725.21	ENST00000556396.5	1961	12	-3	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	52.0590891231356	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCTTCATTCTGACTGT	46	False	NA	NA	False	NA	NA	NA	73886804	73931840	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_73886916_73892026_73892209_73893796_73893933_73896347_73896535_73898070_73898263_73903959_73904111_73904901_73905084_73909340_73909431_73920979_73921106_73922065_73922207_73923394_73923523_73931502
H1_mix_00026228	chr14	+	2354	12	NIC	ENSG00000119725.21	novel	2293	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	68.8764614519994	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTCCTTTAAATAAACAAAA	46	False	NA	-18	True	TTTAAA	-32	NA	73886804	73932247	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_73886916_73888272_73888365_73892026_73892209_73893796_73893933_73896315_73896535_73898070_73898263_73903959_73904111_73904901_73905084_73909340_73909431_73920979_73921106_73923394_73923523_73931502
H1_mix_00026229	chr14	+	595	4	FSM	ENSG00000119725.21	ENST00000556659.5	595	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	74.2473344078201	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGAGCAGGTATTCTTT	11	True	NA	NA	False	NA	NA	NA	73886858	73896523	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_73886928_73892026_73892209_73893796_73893933_73896315
H1_mix_00026230	chr14	+	1211	9	FSM	ENSG00000119725.21	ENST00000541357.6	1212	9	-2	3	0	-3	multi-exon	FALSE	canonical	1	2	junction_5	75.216250737457	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAAGTGGTCTCTTGCCCT	11	True	NA	NA	False	AGTAAA	-11	NA	73886858	73923522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_73886916_73892026_73892108_73893796_73893933_73896315_73896535_73898070_73898263_73904901_73905084_73909340_73909431_73920979_73921106_73923394
H1_mix_00026232	chr14	+	1579	12	FSM	ENSG00000119723.17	ENST00000394026.8	1608	12	29	0	15	0	multi-exon	FALSE	canonical	0	0	junction_1	26.5167964857705	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTCTCTTTTTCTTCTT	37	False	NA	7	True	AATAAA	-14	NA	73949954	73963108	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_73950181_73953434_73953570_73955450_73955510_73955804_73955929_73958146_73958278_73958970_73959079_73959161_73959225_73959414_73959523_73961172_73961376_73961454_73961571_73961736_73961904_73962969
H1_mix_00026234	chr14	+	592	6	FSM	ENSG00000205659.12	ENST00000554076.5	585	6	-7	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	73.6711612505192	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATAGGAAAGATACACAC	-7	True	NA	NA	False	ATTAAA	-22	NA	74084955	74114295	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_74084994_74091231_74091307_74095947_74095986_74097793_74097861_74101154_74101239_74114005
H1_mix_00026237	chr14	+	5500	17	FSM	ENSG00000119596.18	ENST00000549293.5	5500	17	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_14	70.4407718849673	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCCCTTTTCTCTTGTTT	2886	False	NA	37	True	AATAAA	-42	NA	74781384	74836190	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_74782326_74797579_74799698_74802555_74802677_74809379_74809798_74809909_74810003_74810224_74810421_74811619_74811739_74812627_74812783_74816202_74816266_74816570_74816691_74816930_74817108_74817193_74817278_74818230_74818315_74821056_74821138_74829212_74829344_74835264_74835448_74835774
H1_mix_00026238	chr14	+	788	4	FSM	ENSG00000119718.11	ENST00000555522.1	772	4	-16	0	-4	0	multi-exon	FALSE	canonical	3	269	junction_2	11.2644968324772	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATCAAGTAAAACATTAAG	-29	True	NA	NA	False	NA	NA	NA	75002916	75005017	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_75003154_75003274_75003396_75003550_75003700_75004736
H1_mix_00026242	chr14	+	2249	3	FSM	ENSG00000119703.15	ENST00000238686.8	2249	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTACAGGGTAGGGATGGG	NA	False	NA	NA	False	AATAAA	-18	NA	75069576	75078423	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_75069750_75070554_75071739_75077531
H1_mix_00026243	chr14	+	1509	3	FSM	ENSG00000119703.15	ENST00000439583.2	1509	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGACTTGTGGTTTGTG	-16	True	NA	21	True	ATTAAA	-15	NA	75069640	75078089	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_75069750_75070554_75071397_75077531
H1_mix_00026245	chr14	+	2059	6	NNC	ENSG00000140044.13	novel	1700	4	NA	NA	27	-8	at_least_one_novel_splicesite	TRUE	canonical	2	7	junction_2	60.2839945590867	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACATAGCCGCCTTGCGT	47	False	NA	21	True	AGTAAA	-12	NA	75428122	75470449	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_75428253_75431680_75431902_75432117_75432337_75437897_75438122_75461425_75461531_75469289
H1_mix_00026246	chr14	+	698	7	FSM	ENSG00000119686.10	ENST00000553341.5	719	7	21	0	-13	0	multi-exon	FALSE	canonical	2	4	junction_1	15.9556677495282	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGAGTATATGGGAGCTTT	NA	False	NA	NA	False	AAGAAA	-11	NA	75622078	75641897	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_75622221_75633628_75633697_75634909_75635014_75639351_75639463_75640954_75641061_75641181_75641294_75641842
H1_mix_00026250	chr14	+	2716	19	NIC	ENSG00000119685.20	novel	4716	32	NA	NA	4	5591	combination_of_known_junctions	FALSE	canonical	3	27	junction_18	41.1809092171435	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTGTTCATTTTTTGGC	36	True	NA	NA	False	AATAAA	-16	NA	75661281	75758545	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_75661638_75663054_75663224_75669415_75669523_75681544_75681628_75683549_75683657_75690191_75690323_75699187_75699271_75707017_75707088_75707622_75707708_75717860_75717963_75719734_75719827_75720595_75720704_75732337_75732420_75733988_75734051_75735194_75735290_75745094_75745209_75745489_75745582_75752892_75752956_75757830
H1_mix_00026256	chr14	+	894	9	NNC	ENSG00000119650.13	novel	816	9	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	128.776392925878	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATCTCCTCCATTTCTTT	26	False	NA	14	True	AATAAA	-14	NA	75985795	76083738	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_75985956_75988884_75988978_76022326_76022395_76058641_76058675_76059326_76059374_76082294_76082368_76082616_76082693_76083226_76083290_76083457
H1_mix_00026261	chr14	+	2294	1	FSM	ENSG00000269883.1	ENST00000600936.1	2314	1	-8	28	-8	-28	mono-exon	FALSE	NA	NA	NA	NA	NA	219	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAATAAATAAACATTTATT	NA	False	NA	NA	False	NA	NA	NA	77140674	77142968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_77140700_77143000
H1_mix_00026263	chr14	+	3135	3	FSM	ENSG00000165548.11	ENST00000557504.1	531	3	92	-2696	92	-5	multi-exon	FALSE	canonical	2	10	junction_1	0.5	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTCCTGGCCCCTGCCT	NA	False	NA	10	True	AATAAA	-13	NA	77251800	77259490	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_77251899_77253304_77253377_77256525
H1_mix_00026267	chr14	+	527	3	FSM	ENSG00000119705.10	ENST00000554074.1	445	3	-18	-64	0	64	multi-exon	FALSE	canonical	2	4	junction_2	7612.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAAAAACAACACATCTCT	8	True	NA	NA	False	NA	NA	NA	77708102	77712102	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_77708209_77710837_77710897_77711740
H1_mix_00026268	chr14	+	880	3	FSM	ENSG00000119705.10	ENST00000556831.5	729	3	-16	-135	0	135	multi-exon	FALSE	canonical	3	13904	junction_2	662.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATACAAAAAAAATTAGA	8	True	NA	NA	False	NA	NA	NA	77708102	77716486	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_77708209_77710837_77710897_77715771
H1_mix_00026269	chr14	+	1359	4	FSM	ENSG00000119705.10	ENST00000557623.5	865	4	0	-494	0	494	multi-exon	FALSE	canonical	2	12	junction_3	6882.34761303632	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTCCTCCTTCTACAT	8	True	NA	NA	False	ATTAAA	-11	NA	77708102	77721601	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_77708209_77710837_77710897_77715771_77715880_77720515
H1_mix_00026270	chr14	+	7595	2	FSM	ENSG00000185070.12	ENST00000683129.1	6788	2	-807	0	-21	0	multi-exon	FALSE	canonical	3	13	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCAGTAAAGTCTTATTT	2983	False	NA	NA	False	NA	NA	NA	85533153	85627893	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_85533994_85621138
H1_mix_00026275	chr14	+	2464	17	NNC	ENSG00000100722.20	novel	18153	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	49	junction_5	237.165158697478	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATCTGAAGTGTCTAATT	4	True	NA	30	True	AATATA	-32	NA	88563009	88611884	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572581_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88596733_88596809_88601923_88602084_88602827_88603061_88607242_88607364_88609266_88609404_88609711_88609804_88610833_88610941_88611744
H1_mix_00026278	chr14	+	2437	17	NNC	ENSG00000100722.20	novel	2529	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	49	junction_5	245.659793973291	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAAGTGTCTAATTTTTC	-14	True	NA	34	True	AATATA	-36	NA	88563037	88611888	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572581_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88596733_88596809_88601923_88602084_88602827_88603061_88607242_88607364_88609266_88609404_88609714_88609804_88610833_88610941_88611744
H1_mix_00026289	chr14	+	1891	14	FSM	ENSG00000042088.14	ENST00000555880.5	1894	14	3	0	3	0	multi-exon	FALSE	canonical	3	24	junction_13	122.708920987599	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAACATTCCTAATAAAGTA	6556	False	NA	-25	True	NA	NA	NA	89963107	90043309	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_89963674_89966146_89966191_89967366_89967423_89971174_89971272_89975780_89975816_89980539_89980633_89984515_89984684_89985131_89985211_89988904_89989091_89989716_89989766_89991916_89991984_89993375_89993484_90019315_90019419_90043069
H1_mix_00026290	chr14	+	2246	3	FSM	ENSG00000100764.14	ENST00000555787.1	2246	3	0	0	0	0	multi-exon	FALSE	canonical	3	1612	junction_1	106.5	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCCTGTTTCTGCAGTCT	8300	False	NA	NA	False	AATAAA	-19	NA	90267475	90272624	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_90268414_90269396_90270353_90272272
H1_mix_00026291	chr14	+	557	2	FSM	ENSG00000198668.14	ENST00000555132.5	554	2	-3	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGTCATTTAAAGAAAGCCA	-1	True	NA	NA	False	NA	NA	NA	90397028	90398803	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_90397234_90398451
H1_mix_00026293	chr14	+	2673	5	FSM	ENSG00000198668.14	ENST00000553964.5	2670	5	-3	0	-3	0	multi-exon	FALSE	canonical	3	8699	junction_4	286.493455422633	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTTATTCATTCTGTT	830	False	NA	6	True	AAAAAG	-14	NA	90397928	90404807	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_90400096_90401258_90401403_90403861_90403969_90404378_90404515_90404688
H1_mix_00026295	chr14	+	2521	14	NIC	ENSG00000133943.21	novel	2435	13	NA	NA	-179	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	23.3747448804228	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTACTCTTCGGAATAT	293	False	NA	23	True	AATAAA	-19	NA	91060652	91225355	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_91060705_91157638_91157691_91160265_91160398_91167224_91167379_91170002_91170202_91173288_91173440_91175933_91176057_91181185_91181390_91188909_91189171_91196374_91196475_91199756_91199906_91204705_91204826_91215404_91215557_91224683
H1_mix_00026296	chr14	+	552	5	FSM	ENSG00000133943.21	ENST00000524232.5	550	5	-2	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	46.5966737010272	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATTCTGCCAGGTCAAC	-19	True	NA	NA	False	NA	NA	NA	91114062	91167278	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_91114284_91145220_91145314_91157638_91157691_91160265_91160398_91167224
H1_mix_00026297	chr14	+	971	7	FSM	ENSG00000133943.21	ENST00000518665.6	959	7	-12	0	2	0	multi-exon	FALSE	canonical	2	9	junction_3	43.8422044255178	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCCAGAGACAGAGATATT	-7	True	NA	3	True	AATAAA	-19	NA	91114074	91167721	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_91114284_91145220_91145314_91147780_91147859_91157638_91157691_91160265_91160398_91167224_91167379_91167468
H1_mix_00026299	chr14	+	2955	14	FSM	ENSG00000133943.21	ENST00000256324.15	2957	14	2	0	2	0	multi-exon	FALSE	canonical	3	30	junction_1	18.4823600531992	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGAAAGTCTTTTTTTTTG	-7	True	NA	NA	False	CATAAA	-21	NA	91114074	91225632	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_91114284_91157638_91157691_91160265_91160398_91167224_91167379_91170002_91170202_91173288_91173440_91175933_91176057_91181185_91181390_91188909_91189171_91196374_91196475_91199756_91199906_91204705_91204826_91215404_91215557_91224683
H1_mix_00026300	chr14	+	2741	15	FSM	ENSG00000133943.21	ENST00000521077.6	2719	15	-22	0	0	0	multi-exon	FALSE	canonical	2	6	junction_13	35.7785136753377	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTACTCTTCGGAATAT	-19	True	NA	23	True	AATAAA	-19	NA	91114062	91225355	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_91114284_91145220_91145314_91147780_91147859_91157638_91157691_91160265_91160398_91167224_91167379_91170002_91170202_91173288_91173440_91175933_91176057_91181185_91181390_91188909_91189171_91196374_91196475_91199756_91199906_91215404_91215557_91224683
H1_mix_00026301	chr14	+	270	1	FSM	ENSG00000260810.1	ENST00000563574.1	705	1	-98	533	-98	-533	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACGTTCGAAGGCCAAGG	NA	False	NA	NA	False	NA	NA	NA	91258200	91258470	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_91258200_91258500
H1_mix_00026306	chr14	+	759	3	FSM	ENSG00000066455.13	ENST00000554700.1	759	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	121	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGTGACAAAAATAAAAAGT	NA	False	NA	-17	True	NA	NA	NA	92833125	92839796	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_92833348_92835558_92835665_92839365
H1_mix_00026320	chr14	+	624	3	FSM	ENSG00000140057.9	ENST00000556643.1	601	3	-23	0	-7	0	multi-exon	FALSE	canonical	3	27	junction_2	5.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAAAATGAAGGCCGGCA	-16	True	NA	NA	False	AATAGA	-15	NA	96392120	96405052	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_96392260_96398074_96398264_96404756
H1_mix_00026321	chr14	+	2288	20	FSM	ENSG00000090060.19	ENST00000553689.5	2267	20	-21	0	1	0	multi-exon	TRUE	canonical	2	40	junction_4	501.628030955651	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAACCTCAGGGGTCC	-34	True	NA	-2	True	AATAAA	-18	NA	96502376	96565048	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_96502601_96520054_96520229_96521005_96521073_96525309_96525392_96531474_96531587_96532330_96532421_96532510_96532650_96534490_96534564_96535878_96536000_96536975_96537061_96542242_96542297_96542773_96542894_96544148_96544259_96547796_96547919_96552479_96552623_96555846_96555948_96556174_96556414_96560648_96560712_96562818_96562894_96564954
H1_mix_00026324	chr14	+	892	6	FSM	ENSG00000090060.19	ENST00000553461.1	892	6	0	0	0	0	multi-exon	FALSE	canonical	3	1245	junction_5	355.921564393056	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTGTATTTTTTATTTT	NA	False	NA	12	True	AATAAA	-13	NA	96527441	96534889	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_96527540_96527952_96528007_96531474_96531587_96532330_96532421_96532510_96532650_96534490
H1_mix_00026332	chr14	+	6325	12	FSM	ENSG00000100749.9	ENST00000681524.1	6456	12	-2	133	0	-133	multi-exon	FALSE	canonical	2	9	junction_8	267.667982322	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAATCCATATGGGACTT	-39	True	NA	NA	False	NA	NA	NA	96797344	96886355	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856527_96856587_96860556_96860736_96876029_96876121_96881176
H1_mix_00026349	chr14	+	2009	3	FSM	ENSG00000078304.19	ENST00000556260.6	2013	3	0	4	0	-4	multi-exon	FALSE	canonical	3	3	junction_2	32.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACACCTGCTTCAGCTTA	76	False	NA	28	True	ATTAAA	-25	NA	101761869	101767045	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_101761921_101762904_101762971_101765153
H1_mix_00026355	chr14	+	14519	77	FSM	ENSG00000197102.14	ENST00000681574.1	14519	77	0	0	0	0	multi-exon	TRUE	canonical	3	94	junction_4	188.615960643362	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGAGCCGGCTCCGCCTC	1	True	NA	12	True	AATAAA	-8	NA	101964572	102050786	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_101964948_101975711_101975800_101979318_101979493_101979718_101979975_101980363_101980551_101983018_101983291_101983381_101983610_101985686_101986764_101987452_101987633_101988702_101988853_101991526_101991674_101994183_101994325_101994672_101994850_101994985_101995097_101995180_101995301_101997034_101997275_101999988_102000145_102000285_102000400_102000953_102001065_102001144_102001355_102001534_102001682_102002536_102002704_102002791_102002966_102004517_102004684_102004761_102004951_102005041_102005237_102005887_102006171_102007007_102007109_102008177_102008338_102009842_102010087_102010275_102010460_102010739_102010953_102011874_102012114_102012313_102012471_102015104_102015333_102015855_102016087_102016348_102016490_102016765_102017000_102017087_102017295_102017382_102017505_102018450_102018617_102019892_102020057_102022750_102022881_102026573_102026708_102027173_102027289_102027382_102027545_102027618_102027834_102027936_102028142_102029538_102029713_102029818_102029939_102030161_102030283_102032271_102032468_102033064_102033183_102033268_102033485_102033975_102034189_102034324_102034453_102036488_102036643_102038459_102038607_102038697_102038849_102039000_102039255_102039411_102039547_102039637_102039733_102040235_102040411_102040597_102040674_102041573_102041735_102042012_102042125_102042227_102042289_102042383_102042508_102042634_102042749_102043874_102044046_102044273_102044492_102044594_102044699_102047816_102048029_102048515_102048670_102049439_102049583_102049713_102049883_102050070
H1_mix_00026359	chr14	+	1701	4	FSM	ENSG00000197102.14	ENST00000647143.1	2554	4	853	0	-490	0	multi-exon	FALSE	canonical	3	689	junction_2	36.1754981536767	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATAAAACACTAAGCATG	NA	False	NA	-3	True	NA	NA	NA	102048515	102050771	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_102049583_102049713_102049883_102050070_102050199_102050434
H1_mix_00026361	chr14	+	2214	8	NIC	ENSG00000022976.16	novel	2992	8	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_7	10.0914188642568	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTGTCTACATTTTTCT	-7	True	NA	6	True	TATAAA	-18	NA	102319743	102342367	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_102320054_102325984_102326888_102331621_102331847_102334553_102334647_102335688_102335839_102338815_102338954_102339093_102339224_102342102
H1_mix_00026371	chr14	+	1873	11	NIC	ENSG00000100664.11	novel	5710	12	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	69	junction_1	755.385888139301	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGATGTTTGGCTCTGAA	51	False	NA	9	True	AATAAA	-20	NA	103334393	103341356	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_103334598_103335791_103335933_103336035_103336118_103336676_103336850_103337115_103337228_103338326_103338473_103338734_103338894_103339171_103339334_103339638_103339804_103340426_103340562_103340962
H1_mix_00026385	chr14	+	3485	18	FSM	ENSG00000075413.19	ENST00000429436.7	3481	18	-4	0	0	0	multi-exon	FALSE	canonical	3	21	junction_16	208.765261133301	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCATTGTCTCCTAATG	5	True	NA	11	True	ATTAAA	-23	NA	103385410	103503831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103386081_103405075_103405268_103428386_103428441_103448918_103448968_103451917_103451984_103457141_103457213_103462404_103462462_103465556_103465794_103465971_103466092_103466342_103466443_103467078_103467192_103468032_103468187_103474992_103475211_103480386_103480491_103491776_103492035_103498501_103498529_103500155_103500201_103502881
H1_mix_00026386	chr14	+	3223	13	NIC	ENSG00000075413.19	novel	3481	18	NA	NA	0	0	intron_retention	FALSE	canonical	1	5	junction_3	175.674474051677	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCATTGTCTCCTAATG	9	True	NA	11	True	ATTAAA	-23	NA	103385414	103503831	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_103386081_103405075_103405268_103428386_103428441_103462404_103462462_103465556_103465794_103465971_103466092_103466342_103466443_103467078_103467192_103468032_103468187_103474992_103475211_103480386_103480491_103491776_103492035_103502881
H1_mix_00026393	chr14	+	875	5	FSM	ENSG00000256053.9	ENST00000477116.5	906	5	31	0	14	0	multi-exon	FALSE	canonical	0	0	junction_1	218.846264532891	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCCCGTTTCCTGTGTTTC	3	True	NA	22	True	AATAAA	-14	NA	103563203	103590526	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103563380_103571622_103571821_103574106_103574171_103587273_103587365_103590180
H1_mix_00026397	chr14	+	2642	15	NIC	ENSG00000126214.22	novel	3250	15	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	2	42	junction_12	122.949155743174	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACTCCGACTGACCTGT	-11	True	NA	6	True	NA	NA	NA	103629202	103686210	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679308_103679546_103684985_103685037_103685637
H1_mix_00026398	chr14	+	3142	14	NIC	ENSG00000126214.22	novel	3135	14	NA	NA	0	0	intron_retention	FALSE	canonical	2	65	junction_13	89.5342319910371	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCCGACTGACCTGTG	-11	True	NA	7	True	AATAAA	-1	NA	103629202	103686211	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679519_103684985
H1_mix_00026399	chr14	+	2467	17	FSM	ENSG00000126214.22	ENST00000555836.5	2467	17	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_15	128.328299076042	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTAAATTAAAAGTTT	23	True	NA	-10	True	NA	NA	NA	103629236	103701514	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679519_103687080_103687212_103692358_103692426_103700654_103700728_103701200
H1_mix_00026401	chr14	+	2524	17	FSM	ENSG00000126214.22	ENST00000334553.11	2550	17	26	0	0	0	multi-exon	FALSE	canonical	2	24	junction_15	130.727038495294	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTACTTGAAAGTTTTT	23	True	NA	20	True	ATTAAA	-16	NA	103629236	103701544	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679546_103687080_103687212_103692358_103692426_103700654_103700728_103701200
H1_mix_00026402	chr14	+	2457	16	FSM	ENSG00000126214.22	ENST00000452929.6	2453	16	-4	0	0	0	multi-exon	FALSE	canonical	2	39	junction_13	114.784242046643	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTACTTGAAAGTTTTT	23	True	NA	20	True	ATTAAA	-16	NA	103629236	103701544	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679546_103687080_103687212_103700654_103700728_103701200
H1_mix_00026407	chr14	+	8682	2	FSM	ENSG00000126214.22_ENSG00000269958.1_ENSG00000269940.1	ENST00000556986.1	1150	2	-7563	31	0	0	multi-exon	FALSE	canonical	3	277	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTTTAAATTAAAAGTT	872	False	NA	-11	True	NA	NA	NA	103692358	103701513	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103700728_103701200
H1_mix_00026412	chr14	+	2013	2	FSM	ENSG00000100711.14	ENST00000554757.1	2013	2	0	0	0	0	multi-exon	FALSE	canonical	3	750	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGACAAGGCCTCGCCTTC	7913	False	NA	19	True	ATTAAA	-16	NA	103731430	103733663	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103732763_103732982
H1_mix_00026413	chr14	+	4556	22	FSM	ENSG00000203485.14	ENST00000617571.5	4556	22	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_21	19.9319704673677	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCGGTGTGCGACTGTCG	1687	False	NA	9	True	AATAAA	-11	NA	104701365	104719603	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_104701757_104703104_104703221_104703294_104703455_104703915_104703950_104706034_104706177_104706909_104707052_104707252_104708003_104708435_104708588_104708670_104708733_104709280_104709384_104709619_104709706_104710087_104710189_104710936_104711008_104711078_104711187_104711628_104711700_104712432_104712554_104712827_104712993_104713206_104713310_104713448_104713607_104714202_104714857_104715283_104715341_104718794
H1_mix_00026414	chr14	+	1886	3	FSM	ENSG00000203485.14	ENST00000675029.1	1692	3	-123	-71	-123	0	multi-exon	FALSE	canonical	3	65	junction_2	4.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGGTTGCCAGGTACTGT	2710	False	NA	NA	False	AATAAA	-19	NA	104702388	104704809	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_104703221_104703294_104703455_104703915
H1_mix_00026418	chr14	+	3398	24	NIC	ENSG00000179364.15	novel	6361	25	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_13	63.5664069358749	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGATATTTTTAATGCTTT	-1	True	NA	22	True	AATAAA	-30	NA	105314736	105395206	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_105315038_105348492_105348581_105352377_105352468_105355051_105355178_105367212_105367376_105368073_105368148_105368458_105368540_105369840_105369901_105376767_105376926_105379738_105379830_105380079_105380155_105380956_105381100_105381913_105382059_105382476_105382582_105382806_105382914_105383358_105383514_105384352_105384464_105384878_105384988_105389960_105390004_105391206_105391250_105391630_105391767_105392618_105392846_105393221_105393336_105394553
H1_mix_00026419	chr14	+	3341	24	NNC	ENSG00000179364.15	novel	3708	24	NA	NA	37	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_11	68.131586239264	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGATATTTTTAATGCTTT	-45	True	NA	22	True	AATAAA	-30	NA	105314784	105395206	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_105315038_105348492_105348581_105352377_105352468_105355051_105355178_105367212_105367376_105368073_105368148_105368458_105368540_105369840_105369901_105376767_105376926_105379738_105379830_105380079_105380155_105380953_105381100_105381913_105382047_105382476_105382582_105382806_105382914_105383358_105383514_105384352_105384464_105384878_105384988_105389960_105390004_105391206_105391250_105391630_105391767_105392618_105392846_105393221_105393336_105394553
H1_mix_00026422	chr14	+	3453	18	FSM	ENSG00000179364.15	ENST00000551692.5	3453	18	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_14	34.1278889292638	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAATGCTTTTCAATAC	1044	False	NA	-18	True	AATAAA	-37	NA	105368084	105395213	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_105368148_105368458_105368540_105369840_105369901_105376767_105376926_105379738_105379830_105380079_105380155_105380956_105381100_105381913_105382047_105382476_105382582_105382806_105382914_105383358_105384464_105384878_105384988_105389960_105390004_105391206_105391250_105391630_105391767_105392618_105392846_105393221_105393336_105394553
H1_mix_00026436	chr14	-	1755	10	FSM	ENSG00000136319.12	ENST00000383029.7	1755	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	67.7655726715725	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCACGTAGTTTGGCCTGC	9	True	NA	NA	False	ATTAAA	-23	NA	20305941	20289130	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_20289747_20291982_20292128_20295311_20295527_20295707_20295855_20296389_20296447_20298796_20298889_20299297_20299449_20300674_20300819_20301832_20301966_20305886
H1_mix_00026437	chr14	-	1604	7	FSM	ENSG00000100814.18	ENST00000398163.6	1604	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	238.175997018078	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAACAGAGTGAGACCC	3934	False	NA	-71	True	NA	NA	NA	20329377	20311428	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_20311753_20313467_20313802_20316226_20316561_20318255_20318471_20325538_20325654_20326715_20326794_20329173
H1_mix_00026439	chr14	-	806	1	FSM	ENSG00000222489.1	ENST00000410557.1	148	1	10	-668	10	668	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGAGGTGGCAAAGGAAA	9995	False	NA	NA	False	NA	NA	NA	20323316	20322510	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_20322500_20323300
H1_mix_00026440	chr14	-	1546	5	FSM	ENSG00000092094.11	ENST00000556124.3	1546	5	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_4	22.3941956765587	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATGTTGGTGATTGGA	6440	False	NA	-13	True	AATAAA	-20	NA	20449557	20447062	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_20447280_20447421_20447521_20447614_20448172_20448732_20448812_20448963
H1_mix_00026441	chr14	-	773	8	FSM	ENSG00000092094.11	ENST00000555223.5	773	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	78.8938837804249	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCTACAGATGAGAGGTAA	9028	False	NA	NA	False	NA	NA	NA	20452448	20447630	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_20447691_20447903_20447995_20448105_20448172_20448732_20448812_20448963_20449014_20449170_20449302_20451973_20452150_20452328
H1_mix_00026442	chr14	-	578	4	FSM	ENSG00000092094.11	ENST00000553640.3	578	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	97.8377341429278	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTAATTGTCTGGATCGTT	8	True	NA	NA	False	NA	NA	NA	20454812	20449207	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_20449267_20451994_20452150_20452328_20452449_20454568
H1_mix_00026445	chr14	-	896	2	FSM	ENSG00000129538.14	ENST00000412779.2	896	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGAAGCGGTTCTGTCT	1	True	NA	-6	True	AATAAA	-21	NA	20802406	20801355	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_20802094_20802248
H1_mix_00026446	chr14	-	868	3	FSM	ENSG00000129538.14	ENST00000340900.3	878	3	0	10	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGAAGCGGTTCTGTCT	10	False	NA	-6	True	AATAAA	-21	NA	20802855	20801355	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_20802094_20802248_20802320_20802796
H1_mix_00026447	chr14	-	1969	15	ISM	ENSG00000165795.25	ENST00000553503.5	2162	16	945	0	2	0	3prime_fragment	FALSE	canonical	3	103	junction_13	37.4198463112716	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCGTTATTATTCTTTGT	7	True	NA	-11	True	AATAAA	-17	NA	21024094	21016771	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21023240_21023322_21024029
H1_mix_00026448	chr14	-	2110	17	NIC	ENSG00000165795.25	novel	2079	17	NA	NA	55	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_16	54.9908728222239	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCGTTATTATTCTTTGT	9860	False	NA	-11	True	AATAAA	-17	NA	21024945	21016771	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21024029_21024097_21024848
H1_mix_00026449	chr14	-	2086	17	NIC	ENSG00000165795.25	novel	2079	17	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_15	65.216825858056	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCGTTATTATTCTTTGT	8	True	NA	-11	True	AATAAA	-17	NA	21025057	21016771	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21023985_21024097_21025028
H1_mix_00026450	chr14	-	2978	16	FSM	ENSG00000165795.25	ENST00000556147.6	2978	16	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_15	30.1725408645381	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCGTTATTATTCTTTGT	4	True	NA	-11	True	AATAAA	-17	NA	21025061	21016771	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21024029
H1_mix_00026451	chr14	-	2149	17	NIC	ENSG00000165795.25	novel	2122	17	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	3	22	junction_16	52.1508853592151	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTATTCTTTGTCTAGG	9281	False	NA	-6	True	AATAAA	-22	NA	21025524	21016766	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21024029_21024097_21025393
H1_mix_00026452	chr14	-	2032	16	FSM	ENSG00000165795.25	ENST00000397851.6	2022	16	0	-10	0	0	multi-exon	FALSE	canonical	3	31	junction_15	50.6173444142969	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTTTGTCTAGGTGTG	9700	False	NA	-2	True	AATAAA	-26	NA	21025105	21016762	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21025028
H1_mix_00026453	chr14	-	1969	17	NIC	ENSG00000165795.25	novel	2122	17	NA	NA	13	-52	combination_of_known_junctions	FALSE	canonical	2	5	junction_15	67.5668361235747	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTGCTTGGGGCTTGGC	2	True	NA	NA	False	NA	NA	NA	21025719	21016902	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21023985_21024097_21025676
H1_mix_00026458	chr14	-	3060	5	NNC	ENSG00000165804.16	novel	3055	5	NA	NA	109	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	116.161525472077	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGTCTGTCTGCCTA	1167	False	NA	-31	True	AATAAA	-21	NA	21103470	21090076	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_21091141_21091410_21091543_21091864_21093291_21093585_21093675_21103121
H1_mix_00026460	chr14	-	1299	3	FSM	ENSG00000165804.16	ENST00000555697.1	654	3	-105	-540	-105	0	multi-exon	FALSE	canonical	3	52	junction_2	83	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGGGCTCCCGAGCGTCCC	953	False	NA	NA	False	NA	NA	NA	21103684	21092662	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21093291_21093585_21093675_21103102
H1_mix_00026461	chr14	-	7251	2	NNC	ENSG00000258441.1	novel	1763	2	NA	NA	-588	60765	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGAAAATAAGCATATATTA	8630	False	NA	NA	False	AAAAAG	-2	NA	21207488	21139313	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_21139351_21200274
H1_mix_00026462	chr14	-	1403	9	FSM	ENSG00000092199.19	ENST00000556513.5	1403	9	0	0	0	0	multi-exon	FALSE	canonical	2	47	junction_7	2911.61251499921	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTCTCCAAAATAATCTCT	5	True	NA	-5	True	AATAAA	-23	NA	21269425	21210932	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21211307_21211809_21211924_21212959_21213118_21230318_21230367_21230957_21231073_21233952_21234230_21263310_21263337_21263666_21263830_21269297
H1_mix_00026464	chr14	-	789	7	FSM	ENSG00000092199.19	ENST00000555137.5	789	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	2946.75390142366	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTGGACAGCGGGGATC	45	False	NA	NA	False	NA	NA	NA	21269411	21212996	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21213118_21230318_21230367_21230957_21231073_21233952_21234230_21236372_21236461_21263310_21263337_21269297
H1_mix_00026470	chr14	-	4367	26	NNC	ENSG00000092201.10	novel	4433	26	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	245	junction_3	359.749388324706	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCTGTGACCGTTCATT	254	False	NA	-10	True	AATAAA	-32	NA	21383958	21351475	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_21352819_21353487_21353566_21353702_21353833_21354415_21354541_21357196_21357367_21357926_21358003_21358314_21358428_21359483_21359610_21360414_21360534_21360845_21360973_21361077_21361214_21362196_21362325_21362793_21362948_21363033_21363150_21363232_21363329_21363437_21363504_21364826_21364940_21365069_21365144_21366438_21366530_21368268_21368442_21369203_21369356_21369749_21369897_21370335_21370489_21371873_21372045_21373337_21373431_21383861
H1_mix_00026472	chr14	-	915	2	FSM	ENSG00000092201.10	ENST00000555943.1	915	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTTTTGAGAAAAATGATCA	-9	True	NA	0	True	AATAAA	-23	NA	21383981	21382974	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21383770_21383861
H1_mix_00026478	chr14	-	553	2	FSM	ENSG00000165821.12	ENST00000541965.1	553	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTCCACCACCCCCTCC	-9	True	NA	NA	False	NA	NA	NA	21537104	21525244	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21525655_21536961
H1_mix_00026479	chr14	-	1134	1	FSM	ENSG00000258458.8	ENST00000672139.1	1134	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CATCTCAAAAAAAAAAAAAG	1606	False	NA	NA	False	NA	NA	NA	22764947	22763813	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22763800_22764900
H1_mix_00026481	chr14	-	387	3	FSM	ENSG00000100461.18	ENST00000557245.1	387	3	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_2	17	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCATGGCCCCATTTCT	7909	False	NA	NA	False	NA	NA	NA	22902241	22901671	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22901884_22901979_22902100_22902186
H1_mix_00026487	chr14	-	686	5	FSM	ENSG00000100462.16	ENST00000476175.6	682	5	0	-4	0	0	multi-exon	FALSE	canonical	3	53	junction_1	385.546608725845	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGCCCCCTGCCACTA	6560	False	NA	-1	True	AATAAA	-24	NA	22922821	22920524	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22920732_22920839_22921057_22922175_22922241_22922442_22922560_22922741
H1_mix_00026488	chr14	-	1911	13	FSM	ENSG00000100462.16	ENST00000397440.8	1907	13	0	-4	0	0	multi-exon	FALSE	canonical	3	11	junction_10	316.916425628798	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGCCCCCTGCCACTA	25	False	NA	-1	True	AATAAA	-24	NA	22929356	22920524	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22921057_22922175_22922241_22922442_22922560_22922741_22922836_22923050_22923161_22924007_22924184_22924269_22924393_22924478_22924538_22924631_22924710_22924878_22925041_22928125_22928212_22928496_22928616_22929166
H1_mix_00026495	chr14	-	1635	9	FSM	ENSG00000092036.19	ENST00000555986.5	1626	9	0	-9	0	0	multi-exon	FALSE	canonical	3	37	junction_8	98.2837092299634	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCCTGAATAAAGTTATG	4	True	NA	-57	True	NA	NA	NA	22957137	22946260	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22952327_22952460_22952540_22952684_22955099_22955177_22956745
H1_mix_00026497	chr14	-	2223	8	FSM	ENSG00000100802.15	ENST00000341470.8	2221	8	0	-2	0	2	multi-exon	FALSE	canonical	0	0	junction_1	12.9252166128772	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTCTCTGAGTTGTTT	7	True	NA	-1	True	AAGAAA	-22	NA	23010132	22986899	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22987400_22987519_22987635_22987902_22988016_22989741_22989846_22990065_22990128_22995947_22996269_22998426_22999403_23010100
H1_mix_00026499	chr14	-	1863	1	FSM	ENSG00000279656.1	ENST00000624870.1	1135	1	-115	-613	-115	613	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCACCCCTCTTTTTCCC	1752	False	NA	NA	False	NA	NA	NA	23024332	23022469	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23022500_23024300
H1_mix_00026500	chr14	-	2709	12	NIC	ENSG00000100813.15	novel	2751	12	NA	NA	0	270	combination_of_known_junctions	FALSE	canonical	3	100	junction_11	164.440297890292	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGGTCCTGTGCACGGT	16	True	NA	NA	False	NA	NA	NA	23071555	23058293	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064258_23064354_23064486_23065965_23066009_23069475_23069618_23071426
H1_mix_00026501	chr14	-	2767	12	NIC	ENSG00000100813.15	novel	2751	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	123	junction_8	177.707113481195	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGCTTTCTTT	9051	False	NA	-3	True	AATAAA	-20	NA	23071617	23058563	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064222_23064354_23064486_23065965_23066009_23069475_23069618_23071124
H1_mix_00026502	chr14	-	4340	18	FSM	ENSG00000100813.15	ENST00000457657.5	4815	18	478	-3	0	0	multi-exon	FALSE	canonical	3	134	junction_15	162.162505532851	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGCTTTCTTT	-4	True	NA	-3	True	AATAAA	-20	NA	23095136	23058563	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064258_23064354_23064489_23065965_23066009_23069475_23069618_23078150_23078267_23078819_23079039_23079546_23080810_23081747_23081837_23090521_23090634_23093478_23093545_23094974
H1_mix_00026508	chr14	-	3222	4	FSM	ENSG00000235194.9	ENST00000558058.5	3222	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.69967317119759	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTACTTGGCCCGCAACCC	6865	False	NA	NA	False	NA	NA	NA	23301583	23296034	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23298823_23299400_23299542_23300757_23300865_23301397
H1_mix_00026509	chr14	-	2384	11	NNC	ENSG00000092096.19	novel	2372	10	NA	NA	0	17323	intron_retention	TRUE	non_canonical	0	0	junction_1	89.7519359122688	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAAGCTTGCATTCTAGT	-3	True	NA	NA	False	NA	NA	NA	23352860	23328990	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_23329023_23346310_23346937_23347100_23347213_23347513_23347732_23347890_23347997_23348160_23348307_23348505_23348672_23349271_23349427_23351751_23351856_23351947_23352452_23352645
H1_mix_00026510	chr14	-	2634	10	NIC	ENSG00000092096.19	novel	2455	10	NA	NA	0	308	intron_retention	FALSE	canonical	3	16	junction_6	106.34221488509	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTTAAGCAAAAAGGGAAT	NA	False	NA	-15	True	AATAAA	-15	NA	23352908	23346005	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_23346937_23347100_23347213_23347459_23347732_23347890_23347997_23348160_23348307_23348505_23348547_23349271_23349427_23351751_23351856_23351947_23352452_23352645
H1_mix_00026513	chr14	-	2558	18	FSM	ENSG00000213983.12	ENST00000465445.6	2554	18	0	-4	0	0	multi-exon	FALSE	canonical	3	41	junction_17	153.000101770778	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAATAAAGCCCAATAAAG	9997	False	NA	-57	True	NA	NA	NA	23567324	23559607	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23559851_23559937_23560037_23560254_23560419_23561295_23561432_23561511_23561636_23561961_23562067_23562287_23562416_23562503_23562594_23563379_23563503_23563583_23563639_23563715_23564222_23564332_23564389_23564561_23564661_23565118_23565200_23565605_23565702_23566063_23566161_23566277_23566420_23567110
H1_mix_00026514	chr14	-	2552	23	NIC	ENSG00000213983.12	novel	2598	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_8	128.433352494817	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGAACCTACACCTGAGGG	-13	True	NA	NA	False	NA	NA	NA	23567788	23559688	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_23559851_23559937_23560037_23560254_23560419_23561295_23561432_23561511_23561636_23561961_23562067_23562287_23562416_23562503_23562594_23563199_23563283_23563379_23563503_23563583_23563639_23563715_23563857_23564045_23564160_23564332_23564389_23564561_23564661_23565118_23565200_23565605_23565702_23565815_23565893_23566063_23566161_23566277_23566420_23566561_23566687_23567110_23567316_23567738
H1_mix_00026523	chr14	-	1459	5	FSM	ENSG00000213983.12	ENST00000556743.5	1456	5	0	-3	0	0	multi-exon	FALSE	canonical	3	41	junction_3	144.354381644618	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACACAGTCTGTCTTAGT	-4	True	NA	NA	False	NA	NA	NA	23567779	23564979	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23565702_23565815_23566161_23566277_23566420_23567110_23567320_23567738
H1_mix_00026529	chr14	-	4389	7	FSM	ENSG00000092051.18	ENST00000397118.7	4386	7	0	-3	0	3	multi-exon	FALSE	canonical	2	11	junction_5	99.0444625183839	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGATTGTCATCTCCTTT	28	True	NA	-2	True	AATAAA	-17	NA	23578785	23568034	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23569718_23570927_23571461_23571801_23571921_23575684_23576457_23577074_23577625_23577868_23577995_23578179
H1_mix_00026530	chr14	-	2447	3	FSM	ENSG00000092051.18	ENST00000553505.1	2447	3	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_2	30.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAAAAGAAGCCAG	2	True	NA	NA	False	TTTAAA	-19	NA	23578570	23574950	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23576457_23577074_23577625_23578179
H1_mix_00026531	chr14	-	2830	4	FSM	ENSG00000215256.5	ENST00000671411.1	2830	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	6.18241233033047	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATAAATTTATTTAGTTT	-29	True	NA	-32	True	AATGAA	-24	NA	23954186	23938761	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23941159_23953308_23953420_23953773_23954034_23954124
H1_mix_00026532	chr14	-	1976	3	FSM	ENSG00000129535.13	ENST00000397002.6	1976	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	1.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGCTTCAGGCTACTGT	61	False	NA	NA	False	NA	NA	NA	24084625	24080106	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24081569_24082467_24082876_24084519
H1_mix_00026534	chr14	-	972	6	NIC	ENSG00000100908.14	novel	838	6	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	91	junction_3	118.285417528958	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAGTGGTATAACTATA	5732	False	NA	-13	True	AATAAA	-15	NA	24141550	24138964	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_24139197_24139359_24139455_24139544_24139790_24140888_24140966_24141106_24141317_24141437
H1_mix_00026537	chr14	-	706	10	FSM	ENSG00000100911.16	ENST00000471700.6	706	10	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	579.136863075422	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCCTTCTGGCGTGTGTC	703	False	NA	-9	True	AATAAA	-20	NA	24146579	24143365	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24143490_24143584_24143672_24144191_24144260_24144399_24144469_24145057_24145156_24145242_24145274_24145378_24145466_24145709_24145773_24146207_24146241_24146533
H1_mix_00026538	chr14	-	643	1	FSM	ENSG00000100911.16	ENST00000559042.1	643	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCCCTTCTGGCGTGTGT	3273	False	NA	-10	True	AATAAA	-19	NA	24144009	24143366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24143400_24144000
H1_mix_00026539	chr14	-	1736	8	FSM	ENSG00000100911.16	ENST00000559453.5	1721	8	0	-15	0	0	multi-exon	FALSE	canonical	3	1345	junction_5	163.628374366915	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCCCTTCTGGCGTGTGT	1044	False	NA	-10	True	AATAAA	-19	NA	24146238	24143366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24143490_24143584_24143672_24143974_24144030_24144191_24144260_24144399_24145156_24145242_24145274_24145378_24145466_24145709
H1_mix_00026544	chr14	-	3537	29	FSM	ENSG00000196497.17	ENST00000559588.5	3537	29	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	80.2381897342951	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCTGTCCCTGAGGCTGG	6765	False	NA	-100	True	NA	NA	NA	24188869	24180304	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24180573_24180688_24180759_24181512_24181618_24181710_24181844_24181954_24182164_24182277_24182404_24182791_24182843_24182975_24183162_24183249_24183356_24183455_24183514_24183589_24183668_24183782_24183899_24183997_24184110_24184297_24184419_24184649_24184764_24184866_24184981_24185182_24185313_24185458_24185568_24185860_24185971_24186128_24186183_24186286_24186452_24186707_24186792_24186877_24186980_24187084_24187151_24187399_24187580_24187666_24187797_24188215_24188258_24188343_24188424_24188551
H1_mix_00026546	chr14	-	2748	10	FSM	ENSG00000254692.1	ENST00000530611.1	2740	10	0	-8	0	8	multi-exon	FALSE	canonical	2	6	junction_5	253.930485286869	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCATGCAGTTGGAGGTT	-1	True	NA	-9	True	AATAAA	-16	NA	24213473	24189148	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24189809_24190379_24190654_24192170_24192357_24192647_24193270_24194674_24195037_24210347_24210484_24210653_24210769_24211414_24211593_24211679_24211830_24213408
H1_mix_00026547	chr14	-	1938	6	FSM	ENSG00000100926.15	ENST00000524835.5	1938	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	106.260058347434	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTATTGCTGTTCTCTCCC	-3	True	NA	NA	False	NA	NA	NA	24195637	24189400	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24189809_24190379_24190654_24192170_24192357_24192647_24193270_24194674_24194831_24195345
H1_mix_00026550	chr14	-	882	3	FSM	ENSG00000100926.15	ENST00000525592.1	882	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	163	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCTTGTGTTTTTACTG	-53	True	NA	1	True	NA	NA	NA	24195687	24192887	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24193270_24194674_24195037_24195549
H1_mix_00026552	chr14	-	1611	1	FSM	ENSG00000278784.1	ENST00000619226.1	1200	1	-398	-13	-398	13	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTTTATAGCAAGGCAG	4094	False	NA	NA	False	ATTAAA	-33	NA	24203209	24201598	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24201600_24203200
H1_mix_00026553	chr14	-	2108	10	FSM	ENSG00000260669.2	ENST00000565988.1	2108	10	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_6	248.409359478549	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTGTTCCCAATAAAACTG	0	True	NA	-71	True	NA	NA	NA	24215974	24209645	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24209936_24210347_24210484_24210653_24210769_24211414_24211593_24211679_24211830_24213408_24214152_24214309_24214396_24214491_24214600_24215551_24215798_24215918
H1_mix_00026555	chr14	-	2102	4	FSM	ENSG00000260669.2	ENST00000528804.1	2102	4	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_3	17.4610678049451	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATTAG	-13	True	NA	NA	False	ACTAAA	-6	NA	24215987	24212738	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24214600_24215551_24215663_24215736_24215798_24215918
H1_mix_00026557	chr14	-	1982	7	NIC	ENSG00000092330.18	novel	1801	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	81	junction_1	46.6502947471932	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTAATCCTTAATAATTA	4	True	NA	-63	True	AATGAA	-45	NA	24242623	24239681	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_24240156_24240262_24240876_24241019_24241117_24241203_24241312_24241674_24241777_24241889_24241995_24242140
H1_mix_00026560	chr14	-	565	3	FSM	ENSG00000092330.18	ENST00000557915.1	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	10.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTAAAATGCTCTCTGTA	2064	False	NA	-24	True	NA	NA	NA	24240598	24239794	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24239932_24240063_24240156_24240262
H1_mix_00026564	chr14	-	877	4	FSM	ENSG00000100949.15	ENST00000560163.1	877	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	40.2022663816634	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTACGTGGCTGCAGATTC	45	True	NA	NA	False	NA	NA	NA	24271516	24269954	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24270141_24270333_24270459_24270836_24270999_24271112
H1_mix_00026567	chr14	-	1628	8	FSM	ENSG00000157379.14	ENST00000558340.1	1623	8	0	-5	0	0	multi-exon	FALSE	canonical	1	5	junction_4	20.9060092913448	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTTGACTGCTGATT	7	True	NA	-5	True	AATAAA	-20	NA	24299743	24290597	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24290996_24291138_24291220_24291555_24291626_24292183_24292702_24296508_24296589_24296737_24296882_24298956_24299131_24299580
H1_mix_00026568	chr14	-	434	3	FSM	ENSG00000129467.14	ENST00000561200.1	434	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTAAGCTACATTCCT	NA	False	NA	NA	False	NA	NA	NA	24319779	24318924	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24319213_24319328_24319437_24319741
H1_mix_00026569	chr14	-	2291	3	FSM	ENSG00000139899.11	ENST00000267406.11	2476	3	143	42	143	-42	multi-exon	FALSE	canonical	2	5	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGTTGCAGAGGAAAATA	142	False	NA	44	True	NA	NA	NA	24429525	24426586	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24427987_24428285_24428406_24428754
H1_mix_00026570	chr14	-	1383	4	FSM	ENSG00000100445.18	ENST00000554698.5	1364	4	0	-19	0	0	multi-exon	FALSE	canonical	3	36	junction_2	163.095745567511	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCTCATCTCTTTGGC	-15	True	NA	-13	True	AATAAA	-19	NA	24442694	24439765	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24440493_24440782_24440927_24442097_24442261_24442345
H1_mix_00026571	chr14	-	1974	3	FSM	ENSG00000100445.18	ENST00000556262.5	1960	3	0	-14	0	0	multi-exon	FALSE	canonical	3	376	junction_2	8	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCTCATCTCTTTGGC	11	True	NA	-13	True	AATAAA	-19	NA	24442776	24439765	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24440493_24440782_24440927_24441673
H1_mix_00026573	chr14	-	5829	6	FSM	ENSG00000139910.20	ENST00000483536.6	6575	6	0	746	0	-746	multi-exon	FALSE	canonical	2	9	junction_1	14.6424041741785	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATTTTGAGTGCAATAC	935	False	NA	NA	False	ATTAAA	-25	NA	26597519	26443838	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_26448964_26472319_26472392_26479976_26480144_26549679_26549782_26595409_26595554_26597300
H1_mix_00026575	chr14	-	417	3	FSM	ENSG00000196792.12	ENST00000554991.5	417	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	2	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGCAGTTTTATTTTT	NA	False	NA	NA	False	NA	NA	NA	30935304	30913523	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_30913658_30918965_30919107_30935162
H1_mix_00026576	chr14	-	9246	43	FSM	ENSG00000092148.14	ENST00000692835.1	8851	43	-386	-9	-300	6	multi-exon	FALSE	canonical	3	77	junction_19	57.6922203615828	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCATGTGACTATTTCA	55	False	NA	3	True	ATTAAA	-21	NA	31208104	31100110	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_31101068_31101179_31101325_31102915_31103067_31105382_31105477_31105589_31105669_31106645_31107254_31107566_31107705_31109396_31109599_31112415_31112544_31113103_31113190_31113276_31113485_31113876_31114060_31114285_31114341_31116235_31116459_31119709_31119867_31121382_31121506_31122913_31123048_31127784_31128007_31128611_31129308_31133237_31133415_31133508_31133676_31134871_31135196_31135475_31135616_31136530_31136666_31139891_31139998_31141857_31141953_31144110_31144258_31144806_31144942_31148720_31148798_31148896_31149161_31149998_31150222_31156839_31157011_31157164_31157304_31168297_31168473_31169353_31169469_31171860_31171960_31172045_31172123_31173155_31173427_31173524_31173807_31174910_31175139_31178019_31178255_31205796_31205958_31207390
H1_mix_00026582	chr14	-	7754	36	NNC	ENSG00000129493.15	novel	7811	36	NA	NA	119	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_30	18.8023880376501	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGTATTTTTAAATTAT	405	False	NA	-2	True	AATAAA	-18	NA	31420176	31291787	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_31293613_31293890_31294105_31295908_31296064_31302294_31302520_31304904_31305178_31306731_31306880_31307892_31308021_31308933_31309183_31312967_31313191_31315769_31315950_31318223_31318293_31321498_31321681_31323564_31323805_31326162_31326343_31337475_31337615_31343895_31344066_31345086_31345277_31347747_31347908_31349788_31349980_31350611_31350718_31358636_31358813_31358893_31359058_31364188_31364299_31371809_31371910_31374815_31374969_31380466_31380579_31383520_31383772_31386419_31386576_31387119_31387376_31388844_31389003_31394051_31394227_31395198_31395349_31398672_31398782_31400300_31400513_31402849_31403050_31420151
H1_mix_00026583	chr14	-	352	1	FSM	ENSG00000283016.1	ENST00000635085.1	411	1	87	-28	87	28	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCTGCAACTCCGCGCC	133	False	NA	NA	False	NA	NA	NA	31320547	31320195	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_31320200_31320500
H1_mix_00026585	chr14	-	1777	1	FSM	ENSG00000258655.2	ENST00000553596.2	1848	1	114	-43	114	43	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAAGTTAGCCAAGGTTG	24	False	NA	NA	False	NA	NA	NA	32076679	32074902	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_32074900_32076700
H1_mix_00026586	chr14	-	414	1	FSM	ENSG00000259086.3	ENST00000556746.2	445	1	51	-20	51	20	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTCTACTTTGAAAGTATA	NA	False	NA	NA	False	NA	NA	NA	32272250	32271836	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_32271800_32272200
H1_mix_00026589	chr14	-	2933	1	FSM	ENSG00000129521.15	ENST00000547327.2	2849	1	2	-86	2	86	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATTTTGTGCTGCTTTCC	-10	True	NA	NA	False	NA	NA	NA	33951079	33948146	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_33948100_33951100
H1_mix_00026590	chr14	-	544	3	Genic_Genomic	ENSG00000240463.1	novel	441	1	NA	NA	-9	110026	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGAGTGTGGTGGCGCA	32	False	NA	NA	False	NA	NA	NA	34569138	34458662	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr14_-_34458688_34486589_34486622_34568651
H1_mix_00026591	chr14	-	332	2	FSM	ENSG00000129518.10	ENST00000555683.1	562	2	0	230	0	-230	multi-exon	FALSE	canonical	3	481	junction_1	0	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACTTTTGGTTCAATTT	-4	True	NA	NA	False	AAAACA	-32	NA	34539704	34536093	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_34536276_34539554
H1_mix_00026592	chr14	-	459	1	FSM	ENSG00000206588.1	ENST00000383861.1	164	1	6	-301	6	301	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCCTGGGGAAAATATCC	NA	False	NA	NA	False	AAAAAG	-16	NA	34556383	34555924	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_34555900_34556400
H1_mix_00026594	chr14	-	4286	4	FSM	ENSG00000165410.15	ENST00000556161.1	546	4	-38	-3702	-38	-43	multi-exon	FALSE	canonical	3	7	junction_3	55.7633890250185	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGTAAGTAGATAAATATT	644	False	NA	NA	False	TTTAAA	-21	NA	34714274	34709155	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_34712978_34713059_34713137_34713253_34713562_34714195
H1_mix_00026595	chr14	-	1377	4	FSM	ENSG00000165410.15	ENST00000554470.5	1387	4	10	0	10	0	multi-exon	FALSE	canonical	2	5	junction_2	63.9079198708753	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGCCTTGTTTTCCTTGG	105	False	NA	NA	False	AATAAA	-21	NA	34714813	34712007	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_34712978_34713059_34713137_34713507_34713562_34714537
H1_mix_00026600	chr14	-	1569	5	FSM	ENSG00000100906.11	ENST00000557389.1	1537	5	-27	-5	-27	0	multi-exon	FALSE	canonical	3	318	junction_4	8.90224690738243	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTTATTAAACAGATTT	929	False	NA	3	True	NA	NA	NA	35404167	35401539	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_35402061_35402393_35402664_35402770_35402860_35403149_35403361_35403689
H1_mix_00026601	chr14	-	1656	3	FSM	ENSG00000100906.11	ENST00000557459.1	780	3	-824	-52	-817	52	multi-exon	FALSE	canonical	3	247	junction_2	35.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTTAAAATTCAGAAGATA	NA	False	NA	NA	False	TATAAA	-26	NA	35405566	35402962	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_35403361_35403689_35403799_35404417
H1_mix_00026602	chr14	-	5607	27	ISM	ENSG00000174373.17	ENST00000389698.7	7864	41	85960	2	-149	-2	3prime_fragment	FALSE	canonical	2	24	junction_25	8.97036541180468	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGTGTTGATTTGTCTT	NA	False	NA	-1	True	AATAAA	-23	NA	35723266	35538353	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_-_35539691_35548507_35548539_35549109_35549235_35570616_35570745_35572559_35572719_35595633_35595790_35605585_35605710_35625360_35625433_35627089_35627952_35634573_35634758_35635463_35635599_35651804_35651874_35654366_35654478_35655806_35655916_35659137_35659197_35664641_35664768_35671388_35671518_35672866_35673023_35674179_35674279_35674515_35674710_35677949_35678103_35683808_35683986_35684928_35685146_35686541_35686667_35689835_35690004_35721687_35721850_35723026
H1_mix_00026603	chr14	-	348	3	FSM	ENSG00000174373.17	ENST00000554355.5	490	3	142	0	-38	0	multi-exon	FALSE	canonical	3	40	junction_2	2	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAAGATTTTGCAGCACA	NA	False	NA	NA	False	NA	NA	NA	35572718	35549173	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_35549235_35570616_35570745_35572559
H1_mix_00026604	chr14	-	1039	4	FSM	ENSG00000174373.17	ENST00000556839.5	1305	4	266	0	266	0	multi-exon	FALSE	canonical	2	24	junction_2	4.02768199119819	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTTTATTTTATATAT	NA	False	NA	NA	False	NA	NA	NA	35723610	35686541	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_35686667_35689835_35690004_35721687_35721850_35723026
H1_mix_00026605	chr14	-	723	3	FSM	ENSG00000174373.17	ENST00000553917.5	723	3	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_1	4.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAAGACCCAGCTTCTCA	NA	False	NA	NA	False	AGTAAA	-10	NA	35723117	35689533	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_35690004_35721687_35721850_35723026
H1_mix_00026607	chr14	-	377	2	FSM	ENSG00000174373.17	ENST00000557104.1	473	2	0	96	0	-96	multi-exon	FALSE	canonical	3	31	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCTTTAGTTGTAGTTGT	NA	False	NA	NA	False	ATTAAA	-32	NA	35750529	35748495	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_35748825_35750481
H1_mix_00026608	chr14	-	853	7	FSM	ENSG00000151332.20	ENST00000604336.5	853	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	155.882077937851	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAACTTGAGGATAAA	21	True	NA	NA	False	NA	NA	NA	36320597	36308156	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_36308190_36311572_36311726_36311958_36312025_36314511_36314609_36314690_36314937_36316692_36316813_36320459
H1_mix_00026609	chr14	-	202	3	FSM	ENSG00000183032.12	ENST00000557611.1	591	3	0	389	0	-389	multi-exon	FALSE	canonical	1	1	junction_1	24.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCATAGGTATGTCTTT	468	False	NA	NA	False	AAGAAA	-43	NA	37172346	36870863	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_36870951_36874955_36875005_37172280
H1_mix_00026610	chr14	-	642	4	Fusion	ENSG00000259048.1_ENSG00000258696.1	novel	364	2	NA	NA	-32094	0	multi-exon	FALSE	canonical	2	5	junction_1	3.09120616516523	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTGGAAATAGTTCTGT	NA	False	NA	0	True	AATAAA	-15	NA	38036941	38003112	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr14_-_38003369_38030126_38030270_38030487_38030592_38036802
H1_mix_00026611	chr14	-	3902	6	FSM	ENSG00000259070.8	ENST00000557440.2	3902	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.8	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTAGAACCTTTGTGGTTT	NA	False	NA	NA	False	NA	NA	NA	38838458	38749099	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_38749655_38760181_38760249_38762101_38762175_38762923_38763046_38835230_38835399_38835541
H1_mix_00026612	chr14	-	3849	21	NNC	ENSG00000100934.15	novel	3843	20	NA	NA	0	36619	intron_retention	FALSE	non_canonical	0	0	junction_1	139.502652304535	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTGGACTTCTGTTTAT	-17	True	NA	NA	False	NA	NA	NA	39103212	38995299	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_38995330_39031919_39033329_39039030_39039097_39040731_39040888_39042785_39042873_39045162_39045325_39048651_39048730_39055142_39055297_39061764_39061872_39063323_39063414_39064912_39064994_39067172_39067297_39074414_39074531_39075934_39076094_39085761_39085907_39086928_39087009_39091476_39091714_39092540_39092628_39093186_39093245_39095897_39096140_39103031
H1_mix_00026613	chr14	-	3813	2	FSM	ENSG00000100934.15	ENST00000554615.1	3813	2	0	0	0	0	multi-exon	FALSE	canonical	3	640	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGGCTATTTTGAAATC	NA	False	NA	-1	True	AATAAA	-18	NA	39041433	39031918	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_39033329_39039030
H1_mix_00026614	chr14	-	203	2	Intergenic	novelGene_429	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTCATATATGTGCAAGTC	NA	False	NA	NA	False	NA	NA	NA	41521695	41515931	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_-_41516055_41521615
H1_mix_00026617	chr14	-	4683	18	NIC	ENSG00000129534.14	novel	4577	17	NA	NA	0	-2	combination_of_known_junctions	TRUE	canonical	3	52	junction_17	98.7616753204943	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTTGTTTTTTG	277	False	45253219	-4	True	AATAAA	-19	NA	45253202	45203191	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_45204213_45204398_45204454_45206082_45206171_45210379_45210529_45217018_45217180_45218281_45218455_45223917_45224747_45226742_45226837_45227662_45227815_45231140_45231299_45232732_45232821_45235813_45235945_45237647_45237722_45242033_45242519_45242760_45242875_45246742_45247378_45250030_45250139_45253034
H1_mix_00026622	chr14	-	909	3	FSM	ENSG00000289195.1	ENST00000693582.1	923	3	12	2	12	-2	multi-exon	FALSE	canonical	3	394	junction_2	143	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAAAACTGTATGTCTGA	11	False	NA	-8	True	AATAAA	-17	NA	48260631	48233744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_48234227_48235430_48235619_48260392
H1_mix_00026623	chr14	-	2482	3	NNC	ENSG00000289195.1	novel	923	3	NA	NA	243	-6	at_least_one_novel_splicesite	FALSE	canonical	3	166	junction_2	257	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTACTGAAAACTGTATGT	242	False	NA	-12	True	AATAAA	-13	NA	48260400	48233748	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_48234227_48235430_48235619_48258584
H1_mix_00026624	chr14	-	2419	4	NNC	ENSG00000289195.1	novel	923	3	NA	NA	176	-6	at_least_one_novel_splicesite	FALSE	canonical	3	166	junction_2	241.132052342003	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTACTGAAAACTGTATGT	175	False	NA	-12	True	AATAAA	-13	NA	48260467	48233748	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_48234227_48235430_48235619_48258584_48260263_48260392
H1_mix_00026625	chr14	-	2598	4	NNC	ENSG00000289195.1	novel	923	3	NA	NA	16	-6	at_least_one_novel_splicesite	FALSE	canonical	3	104	junction_2	257.195558973236	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTACTGAAAACTGTATGT	15	False	NA	-12	True	AATAAA	-13	NA	48260627	48233748	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_48234227_48235430_48235619_48258565_48260263_48260392
H1_mix_00026626	chr14	-	8454	3	NNC	ENSG00000289195.1	novel	923	3	NA	NA	13	-6	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	336	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTACTGAAAACTGTATGT	12	False	NA	-12	True	AATAAA	-13	NA	48260630	48233748	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_48234227_48235430_48243169_48260392
H1_mix_00026627	chr14	-	1333	4	NNC	ENSG00000289195.1	novel	923	3	NA	NA	13	-6	at_least_one_novel_splicesite	FALSE	canonical	3	130	junction_3	251.217479929686	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTACTGAAAACTGTATGT	12	False	NA	-12	True	AATAAA	-13	NA	48260630	48233748	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_48234227_48235430_48235619_48258584_48259014_48260392
H1_mix_00026628	chr14	-	1127	4	Fusion	ENSG00000287492.1_ENSG00000289195.1	novel	923	3	NA	NA	-2381	-6	multi-exon	FALSE	canonical	3	13	junction_2	286.142544120156	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTACTGAAAACTGTATGT	NA	False	NA	-12	True	AATAAA	-13	NA	48267990	48233748	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr14_-_48234227_48235430_48235619_48265560_48265755_48267723
H1_mix_00026629	chr14	-	896	3	NNC	ENSG00000289195.1	novel	923	3	NA	NA	14	-10	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	191	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATAGTACTGAAAACTGT	13	False	NA	-16	True	AATAAA	-9	NA	48260629	48233752	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_48234224_48235430_48235619_48260392
H1_mix_00026630	chr14	-	1413	3	NNC	ENSG00000287492.1	novel	512	2	NA	NA	-2357	513	at_least_one_novel_splicesite	FALSE	canonical	3	124	junction_1	18	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTCTTTCTTTAGCACT	NA	False	NA	-3	True	AATAAA	-18	NA	48267966	48261507	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_48262484_48265560_48265755_48267723
H1_mix_00026631	chr14	-	2819	2	FSM	ENSG00000165506.15	ENST00000406043.3	2819	2	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTTTGTCACACAAAGT	2	True	NA	-15	True	AATAAA	-20	NA	49635230	49625173	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_49626049_49633286
H1_mix_00026632	chr14	-	283	3	FSM	ENSG00000100479.13	ENST00000555724.5	274	3	0	-9	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGTTCTGCTTAAATTTG	NA	False	NA	-16	True	AATAAA	-17	NA	49647360	49643554	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_49643671_49646993_49647093_49647292
H1_mix_00026633	chr14	-	1545	17	NIC	ENSG00000100479.13	novel	1692	19	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_6	30.6797979132849	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGTTCTGCTTAAATTTG	33	False	NA	-16	True	AATAAA	-17	NA	49688200	49643554	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_49643671_49647292_49647361_49650264_49650442_49651268_49651378_49653989_49654068_49654154_49654215_49655004_49655095_49655670_49655844_49663314_49663388_49664625_49664675_49665106_49665164_49666329_49666414_49669523_49669599_49674122_49674217_49679724_49679801_49683592_49683694_49688135
H1_mix_00026634	chr14	-	1604	18	FSM	ENSG00000100479.13	ENST00000539565.6	1792	18	188	0	-20	0	multi-exon	FALSE	canonical	3	9	junction_15	23.9978372727966	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATATTACAATAAAATTATG	-1	True	NA	-46	True	AAGAAA	-43	NA	49688234	49643584	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_49643671_49647292_49647361_49650264_49650442_49651268_49651378_49653989_49654068_49654154_49654215_49654783_49654839_49655004_49655095_49655670_49655844_49663314_49663388_49664625_49664675_49665106_49665164_49666329_49666414_49669523_49669599_49674122_49674217_49679724_49679801_49683592_49683694_49688135
H1_mix_00026636	chr14	-	2062	11	FSM	ENSG00000165525.18	ENST00000556691.5	2062	11	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_9	17.5957381203518	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGCTTAATCATTTCTAT	NA	False	NA	-8	True	AATATA	-18	NA	49800800	49783813	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_49784714_49784924_49785005_49785091_49785136_49785219_49785321_49786717_49786751_49789145_49789344_49789495_49789574_49795790_49795945_49799474_49799525_49799635_49799679_49800419
H1_mix_00026637	chr14	-	2745	10	FSM	ENSG00000165525.18	ENST00000556074.5	3047	10	303	-1	303	0	multi-exon	FALSE	canonical	1	1	junction_7	81.3576162900257	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGCTTAATCATTTCTAT	NA	False	NA	-8	True	AATATA	-18	NA	49801216	49783813	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_49784714_49784924_49785321_49786717_49786751_49789145_49789344_49789495_49789574_49795790_49795945_49796232_49796329_49799474_49799525_49799635_49799679_49800419
H1_mix_00026638	chr14	-	4212	34	NNC	ENSG00000165525.18	novel	5819	33	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_17	55.2288668348726	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTCAGCTTAATCATTTC	-16	True	NA	-11	True	AATATA	-15	NA	49852821	49783816	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_49784714_49784924_49785005_49785091_49785136_49785219_49785321_49786717_49786751_49789145_49789344_49789495_49789574_49795790_49795945_49799474_49799525_49799635_49799679_49800419_49800697_49802452_49802574_49802668_49802728_49803236_49803295_49806020_49806134_49813987_49814051_49814753_49814858_49820342_49820457_49825866_49825956_49828290_49828355_49828615_49828788_49829053_49829263_49829348_49829427_49831298_49831362_49832050_49832127_49832206_49832278_49833422_49833497_49834362_49834450_49838138_49838207_49840717_49840867_49846139_49846266_49851562_49851666_49851806_49851876_49852694
H1_mix_00026639	chr14	-	3797	34	NNC	ENSG00000165525.18	novel	5819	33	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	39.7126270301802	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGCTTAATCATTTCTAT	17	True	NA	-8	True	AATATA	-18	NA	49852788	49783813	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_49784072_49784362_49784714_49784924_49785005_49785091_49785136_49785219_49785321_49786717_49786751_49789145_49789344_49789495_49789574_49795790_49795945_49799474_49799525_49799635_49799679_49800419_49800697_49802452_49802574_49802668_49802728_49803236_49803295_49806020_49806134_49813987_49814051_49814753_49814858_49825866_49825956_49828290_49828355_49828615_49828808_49829053_49829263_49829348_49829427_49831298_49831362_49832050_49832127_49832206_49832278_49833422_49833497_49834362_49834450_49838138_49838207_49840717_49840867_49846139_49846266_49851562_49851666_49851806_49851876_49852694
H1_mix_00026645	chr14	-	261	1	FSM	ENSG00000278771.1	ENST00000610674.1	299	1	4	34	4	-34	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGCCTGGGCAACATAGT	1	True	NA	NA	False	NA	NA	NA	49853910	49853649	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_49853600_49853900
H1_mix_00026646	chr14	-	5912	11	NNC	ENSG00000087299.12	novel	1958	11	NA	NA	0	-13	at_least_one_novel_splicesite	TRUE	canonical	1	3	junction_1	26.1091937830336	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTATTTTAAGTTTCTT	78	False	NA	-18	True	ATTAAA	-3	NA	50312147	50242446	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_50246953_50247040_50247254_50265357_50265490_50267752_50267911_50269162_50269331_50278519_50278555_50283870_50284034_50294114_50294247_50302016_50302169_50302901_50303018_50312010
H1_mix_00026648	chr14	-	210	3	FSM	ENSG00000100490.10	ENST00000525911.5	210	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	4.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACCAAGAAACTTAACTAC	5248	False	NA	NA	False	NA	NA	NA	50339029	50330111	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50330182_50334564_50334622_50338946
H1_mix_00026649	chr14	-	1744	8	ISM	ENSG00000100490.10	ENST00000395834.6	5402	10	681	5551	-124	110	internal_fragment	FALSE	canonical	3	8	junction_1	3.27014946921703	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGATGAGTGCTTTTGGT	1097	False	NA	NA	False	NA	NA	NA	50396200	50331815	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_-_50332433_50334564_50334622_50338946_50339030_50341031_50341233_50342131_50342223_50344985_50345059_50359027_50359150_50395700
H1_mix_00026650	chr14	-	745	4	FSM	ENSG00000100490.10	ENST00000534267.5	745	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	3.85861230093008	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGTGTCATCATGTACA	3148	False	NA	NA	False	AATGAA	-20	NA	50341129	50331925	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50332433_50334564_50334622_50338946_50339030_50341031
H1_mix_00026651	chr14	-	4370	33	NNC	ENSG00000012983.12	novel	4354	33	NA	NA	1	2830	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	54.493118831647	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAGGACCTGAACCTGAA	11	True	NA	NA	False	NA	NA	NA	50532608	50415670	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_50415703_50418477_50420107_50423120_50423177_50425906_50425978_50428661_50428755_50429191_50429261_50434393_50434572_50434961_50435066_50437475_50437535_50437893_50438011_50440011_50440074_50440361_50440442_50442731_50442817_50443728_50443771_50443938_50444037_50445040_50445195_50446078_50446122_50447413_50447482_50448773_50448833_50456515_50456595_50462664_50462782_50464051_50464134_50466582_50466646_50468650_50468783_50475076_50475150_50476127_50476171_50476258_50476307_50482360_50482417_50485577_50485643_50486103_50486195_50504799_50504858_50531941_50532159_50532461
H1_mix_00026652	chr14	-	4737	32	NNC	ENSG00000012983.12	novel	4354	33	NA	NA	-38	-486	intron_retention	FALSE	canonical	3	53	junction_9	37.4134311217756	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGCTGGACATGAAAATAG	39	False	NA	NA	False	NA	NA	NA	50532657	50420045	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_50420107_50423120_50423177_50425906_50425978_50428661_50428755_50429191_50429261_50434393_50434572_50434961_50435066_50437475_50437535_50437893_50438009_50438091_50440074_50440361_50440442_50442731_50442817_50443728_50443771_50443938_50444037_50445040_50445195_50446078_50446122_50447413_50447482_50448773_50448833_50456515_50456595_50462664_50462782_50464051_50464134_50466582_50466646_50468650_50468783_50475076_50475150_50476127_50476171_50476258_50476307_50482360_50482417_50485577_50485643_50486103_50486195_50504799_50504858_50531941_50532159_50532461
H1_mix_00026658	chr14	-	2816	21	NNC	ENSG00000100504.17	novel	2799	20	NA	NA	0	20513	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	52.3426212564866	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAGAAATACAATCATAGA	13	False	NA	NA	False	NA	NA	NA	50944470	50884703	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_50884736_50905218_50905557_50908270_50908338_50908820_50908956_50909894_50910103_50911729_50911872_50911977_50912037_50912155_50912304_50913028_50913131_50914700_50914816_50915335_50915500_50915824_50915972_50916641_50916735_50916961_50917106_50920540_50920624_50920955_50921068_50923968_50924101_50931672_50931777_50935106_50935186_50937735_50937838_50944160
H1_mix_00026660	chr14	-	570	1	FSM	ENSG00000277050.1	ENST00000616999.1	600	1	11	19	11	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	482	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAATTTTTCAAGGAT	NA	False	NA	NA	False	CATAAA	-14	NA	51637936	51637366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_51637400_51637900
H1_mix_00026661	chr14	-	1964	13	FSM	ENSG00000087303.19	ENST00000556572.1	1964	13	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_10	11.3097180434449	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATCAGAACCTGGACCCT	3241	False	NA	NA	False	AAGAAA	-36	NA	52038952	52005454	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_52005497_52005736_52005850_52006536_52006661_52007809_52007968_52010875_52011048_52011553_52011684_52014286_52014457_52015053_52015276_52019060_52019295_52020058_52020179_52028721_52028851_52029546_52029691_52038746
H1_mix_00026664	chr14	-	234	2	FSM	ENSG00000100522.10	ENST00000553987.1	234	2	0	0	0	0	multi-exon	FALSE	canonical	3	494	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTGACTTTGAGTTTCCA	8163	False	NA	-8	True	AATAAA	-22	NA	52783485	52781740	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_52781912_52783422
H1_mix_00026665	chr14	-	3029	15	FSM	ENSG00000073712.15	ENST00000554152.5	3029	15	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_13	188.253858675254	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTTTGTACTTGTTTT	NA	False	NA	-5	True	AATAAA	-21	NA	52919339	52857270	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_52858551_52859572_52859715_52860340_52860466_52861013_52861035_52864400_52864623_52864746_52864854_52872798_52872924_52874176_52874227_52875222_52875358_52878581_52878690_52881035_52881139_52881243_52881470_52881795_52881829_52893292_52893428_52919122
H1_mix_00026668	chr14	-	1233	4	FSM	ENSG00000100528.12	ENST00000395573.8	1233	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	350.314461908472	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTCACTTTCAGTGCAT	-31	True	NA	-18	True	AATAAA	-12	NA	54441391	54426935	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_54427842_54432107_54432221_54436368_54436438_54441246
H1_mix_00026669	chr14	-	523	4	FSM	ENSG00000100528.12	ENST00000556113.1	523	4	0	0	0	0	multi-exon	FALSE	canonical	3	696	junction_1	29.0287214094363	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTTAAGTGTGCATGGT	20	True	NA	NA	False	NA	NA	NA	54441340	54430157	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_54430405_54432107_54432221_54436368_54436438_54441246
H1_mix_00026670	chr14	-	6713	4	FSM	ENSG00000197045.13	ENST00000554908.5	6721	4	0	8	0	-1	multi-exon	FALSE	canonical	0	0	junction_1	490.025169421599	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGACTTCCAGCTTTTC	-3	True	NA	-31	True	AATAAA	-11	NA	54489025	54474491	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_54480957_54481408_54481459_54483670_54483768_54488924
H1_mix_00026671	chr14	-	639	6	FSM	ENSG00000197045.13	ENST00000628554.2	639	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	539.180340887907	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGGACTTTTTGCACTC	7	True	NA	NA	False	NA	NA	NA	54488957	54477857	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_54478160_54479785_54479860_54480873_54480957_54481408_54481459_54483670_54483768_54488924
H1_mix_00026672	chr14	-	298	4	FSM	ENSG00000197045.13	ENST00000554682.1	298	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	485.55764047353	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCTTTAAAAGATTTATTT	-16	True	NA	NA	False	NA	NA	NA	54488980	54481394	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_54481459_54482121_54482203_54483670_54483768_54488924
H1_mix_00026674	chr14	-	348	1	FSM	ENSG00000239686.1	ENST00000488313.1	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGCGGGGCGCGGTGGCT	NA	False	NA	NA	False	AAAAAG	-6	NA	55282643	55282295	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_55282300_55282600
H1_mix_00026675	chr14	-	3462	11	NNC	ENSG00000126775.9	novel	4715	10	NA	NA	0	65	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	18.7307234243635	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGATTGAACCCTGGAGTA	0	True	NA	60	True	NA	NA	NA	55411830	55366325	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_55367491_55368808_55369926_55377818_55377905_55377983_55378075_55380572_55380691_55381961_55382192_55385858_55386097_55390910_55390993_55395939_55395983_55397371_55397435_55411601
H1_mix_00026676	chr14	-	2185	4	FSM	ENSG00000186615.12	ENST00000412224.6	2185	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	9.20144916122817	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATACAAAAATTA	-12	True	NA	NA	False	NA	NA	NA	55580110	55557971	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_55559775_55561088_55561164_55578605_55578738_55579935
H1_mix_00026677	chr14	-	2160	4	NNC	ENSG00000165588.19	novel	2109	3	NA	NA	0	7706	intron_retention	FALSE	non_canonical	0	0	junction_1	444.796832522695	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGGATGAAACAATAGGTAA	-5	True	NA	NA	False	TTTAAA	-25	NA	56805667	56792198	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_56792226_56800706_56802356_56804187_56804364_56805359
H1_mix_00026681	chr14	-	10937	18	FSM	ENSG00000070367.16	ENST00000555148.5	2349	18	-551	-8037	-483	-1	multi-exon	FALSE	canonical	2	13	junction_16	123.484333511735	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATACAATTGTTGTTTTT	5991	False	NA	-5	True	AATAAA	-17	NA	57269388	57200507	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_57208798_57209566_57209783_57209952_57210062_57217981_57218069_57219321_57219443_57222307_57222417_57229733_57229882_57231505_57231716_57232666_57232750_57233742_57233884_57233987_57234033_57235710_57235821_57237337_57237367_57239594_57239660_57244164_57244360_57246710_57246828_57247617_57247713_57268621
H1_mix_00026685	chr14	-	895	4	NIC	ENSG00000257621.9	novel	2475	5	NA	NA	0	-11	combination_of_known_splicesites	FALSE	canonical	2	9	junction_1	51.6483838619908	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTACTTGGGAGGCTGAG	-1	True	NA	NA	False	ACTAAA	-44	NA	58298126	58273651	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_58274136_58285590_58285757_58291634_58291708_58297954
H1_mix_00026687	chr14	-	1052	6	NNC	ENSG00000100575.14	novel	1252	6	NA	NA	0	16237	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	81.0160477930144	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGCCAAACACTTTTCCA	-6	True	NA	NA	False	AAAAAG	-2	NA	58427146	58392257	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_58392288_58408488_58409169_58410842_58410939_58411906_58411972_58424007_58424096_58427053
H1_mix_00026688	chr14	-	1252	6	FSM	ENSG00000100575.14	ENST00000395159.7	1252	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	78.6318001828777	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAATGCATGATCCTTTT	-5	True	NA	-6	True	CATAAA	-19	NA	58427531	58408494	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_58409169_58410842_58410939_58411906_58411972_58424007_58424096_58427053_58427243_58427391
H1_mix_00026689	chr14	-	1060	5	FSM	ENSG00000100575.14	ENST00000216463.8	1075	5	15	0	-7	0	multi-exon	FALSE	canonical	2	6	junction_4	99.9334153324102	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATACGTTGAAATGTTTT	14	True	NA	16	True	NA	NA	NA	58427512	58408602	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_58409169_58410842_58410939_58424007_58424096_58427053_58427243_58427391
H1_mix_00026692	chr14	-	8290	1	FSM	ENSG00000181619.12	ENST00000395116.2	4622	1	-4175	507	-4175	-507	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGGAAATCAATCATGAT	5638	False	NA	NA	False	NA	NA	NA	59469555	59461265	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_59461300_59469600
H1_mix_00026693	chr14	-	3044	5	NIC	ENSG00000126790.12	novel	1516	5	NA	NA	26	-5	intron_retention	FALSE	canonical	3	19	junction_1	32.0819263760766	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAACTTTACAAGCTCATT	25	False	59484407	NA	False	ATTAAA	-29	NA	59484382	59472610	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_59473091_59474438_59476007_59476091_59476215_59479181_59479352_59483679
H1_mix_00026697	chr14	-	1073	1	Genic_Genomic	ENSG00000259169.1	novel	NA	NA	NA	NA	190	183	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCAACACAGCAAGACCCC	NA	False	NA	NA	False	AATATA	-21	NA	60399823	60398750	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr14_-_60398800_60399800
H1_mix_00026698	chr14	-	2678	2	FSM	ENSG00000126778.12	ENST00000645694.3	4005	2	33	1294	33	-19	multi-exon	FALSE	canonical	1	1	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTACTCAGGATAACAGGAT	9028	False	NA	NA	False	ATTAAA	-3	NA	60649444	60644714	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_60646578_60648629
H1_mix_00026699	chr14	-	4722	4	NIC	ENSG00000100625.9	novel	1573	3	NA	NA	0	2981	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	33.436506994601	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCCTGTGGCACTTATTT	-5	True	NA	51	True	ATTAAA	-20	NA	60724351	60716820	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_60720446_60720979_60721145_60723211_60724048_60724255
H1_mix_00026700	chr14	-	5322	6	NNC	ENSG00000126814.7	novel	5304	5	NA	NA	0	53243	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	42.9958137497129	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATTAATTGGATTGATC	-13	True	NA	NA	False	AAAAAG	-1	NA	60981079	60918197	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_60918227_60971451_60975195_60975474_60976127_60977513_60977639_60979230_60979887_60980962
H1_mix_00026701	chr14	-	2164	14	FSM	ENSG00000154001.14	ENST00000555899.1	2164	14	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	84.0690051870254	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATCGGTCTTC	-2	True	NA	NA	False	NA	NA	NA	63543298	63375760	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_63376109_63382070_63382158_63384443_63384572_63389611_63389732_63391816_63391868_63391971_63392026_63393819_63393929_63395225_63395286_63396585_63396717_63415139_63415233_63421992_63422095_63453688_63453886_63539528_63539693_63542778
H1_mix_00026702	chr14	-	744	8	FSM	ENSG00000154001.14	ENST00000556150.1	744	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	105.932400470242	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGAGTTTGATAGAAGAAA	NA	False	NA	NA	False	AATACA	-2	NA	63453776	63384530	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_63384572_63389611_63389732_63393819_63393929_63395225_63395286_63396585_63396717_63415139_63415233_63421992_63422095_63453688
H1_mix_00026703	chr14	-	969	1	FSM	ENSG00000270878.1	ENST00000603606.1	1261	1	127	165	127	-165	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTGAAGAGAGGCATCTT	5551	False	NA	NA	False	NA	NA	NA	63595164	63594195	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_63594200_63595200
H1_mix_00026704	chr14	-	203	1	FSM	ENSG00000200693.2	ENST00000363823.2	204	1	7	-6	7	6	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTAAAAAATAATAAAATAAA	NA	False	NA	NA	False	AAGAAA	-25	NA	63651492	63651289	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_63651300_63651500
H1_mix_00026705	chr14	-	3326	8	NNC	ENSG00000139998.16	novel	3518	8	NA	NA	0	52135	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	137.023310991605	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATTCTTTAATGAACCC	4993	False	NA	NA	False	AATAAA	-42	NA	64972197	64893678	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_64893707_64945815_64948513_64948667_64948734_64950324_64950415_64951073_64951152_64951602_64951664_64952510_64952572_64971952
H1_mix_00026706	chr14	-	1029	2	FSM	ENSG00000176153.13	ENST00000389614.6	922	2	-101	-6	-100	0	multi-exon	FALSE	canonical	1	3	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTGTGTGTTCTTTG	8152	False	NA	NA	False	AATAAA	-22	NA	64942846	64939151	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_64939839_64942504
H1_mix_00026707	chr14	-	330	4	FSM	ENSG00000125952.20	ENST00000341653.6	330	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	69.7869774544092	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAC	5	True	NA	NA	False	AAAAAG	-21	NA	65102387	65006173	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_65006285_65093707_65093816_65101545_65101573_65102303
H1_mix_00026710	chr14	-	1085	8	FSM	ENSG00000100554.12	ENST00000555431.5	1085	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	172.830812634548	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAACCTTGGCGCTGTTGTC	4	True	NA	NA	False	NA	NA	NA	67359787	67338250	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_67338763_67340439_67340519_67343371_67343439_67345767_67345872_67347408_67347454_67349036_67349105_67350610_67350691_67359657
H1_mix_00026711	chr14	-	893	4	FSM	ENSG00000100564.9	ENST00000560722.5	903	4	10	0	7	0	multi-exon	FALSE	canonical	3	3	junction_2	42.8200368467328	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACACTTTCGGAAATTGC	26	True	NA	NA	False	NA	NA	NA	67600258	67589805	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_67590173_67592634_67592716_67593742_67593953_67600023
H1_mix_00026714	chr14	-	1103	7	FSM	ENSG00000100568.11	ENST00000216456.6	1103	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	508.888794881117	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGCTGTGGGAGGAGGGA	7	True	NA	-125	True	NA	NA	NA	67674610	67651263	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_67651482_67653436_67653499_67656415_67656590_67659730_67659923_67662476_67662536_67663028_67663191_67674374
H1_mix_00026715	chr14	-	326	1	FSM	ENSG00000258626.2	ENST00000553847.2	315	1	-162	151	-162	-151	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACCATGGTTCTCAGTT	NA	False	NA	NA	False	NA	NA	NA	67652776	67652450	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_67652400_67652800
H1_mix_00026720	chr14	-	278	1	FSM	ENSG00000258477.1	ENST00000557078.1	499	1	258	-37	258	37	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCGTAGCTCAGGAGAGC	299	False	NA	NA	False	NA	NA	NA	68421938	68421660	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_68421700_68421900
H1_mix_00026722	chr14	-	3652	22	NNC	ENSG00000072110.16	novel	3722	22	NA	NA	0	10505	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	291.449353445127	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGAACCTATTCTGTGTA	-3	True	NA	NA	False	NA	NA	NA	68979262	68863622	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_68863654_68874122_68875018_68877081_68877241_68878988_68879070_68879961_68880109_68880809_68880990_68882457_68882593_68882872_68883056_68884167_68884309_68884774_68884884_68885424_68885576_68890138_68890287_68892052_68892284_68893654_68893748_68902476_68902563_68904654_68904737_68909317_68909397_68909954_68910043_68912155_68912243_68921005_68921126_68925557_68925673_68978951
H1_mix_00026726	chr14	-	5237	10	NNC	ENSG00000139990.18	novel	5946	9	NA	NA	-211	33970	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	68.0685928555405	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGCATGATGGCATGTG	325	False	NA	NA	False	AATACA	-27	NA	69153361	69016910	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_69016936_69051856_69055612_69062383_69062512_69075344_69075412_69091673_69091888_69116365_69116496_69118138_69118279_69119193_69119231_69122216_69122361_69152764
H1_mix_00026733	chr14	-	716	1	FSM	ENSG00000274818.1	ENST00000616634.1	455	1	-268	7	-268	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTTTGAAATTTGAGTT	NA	False	NA	-16	True	AATAAA	-10	NA	70907379	70906663	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_70906700_70907400
H1_mix_00026735	chr14	-	305	2	FSM	ENSG00000165861.14	ENST00000556761.1	545	2	238	2	238	-2	multi-exon	FALSE	canonical	3	62	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGCCTGGCAGTGCTTCT	NA	False	NA	NA	False	NA	NA	NA	72974969	72974079	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_72974194_72974778
H1_mix_00026736	chr14	-	2929	2	FSM	ENSG00000258376.2	ENST00000554614.2	3050	2	39	82	39	-82	multi-exon	FALSE	canonical	2	6	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGGACAAAAATCTCTAAGC	55	False	NA	NA	False	NA	NA	NA	73245940	73242732	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_73245245_73245523
H1_mix_00026737	chr14	-	4163	2	ISM	ENSG00000258944.1_ENSG00000133961.21	ENST00000556578.1	777	3	-3987	694	-3987	-694	5prime_fragment	FALSE	canonical	2	6	junction_1	0	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCAGAGATGCAAACACTG	9114	False	NA	NA	False	AAAACA	-15	NA	73278068	73272875	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_-_73272909_73273938
H1_mix_00026738	chr14	-	4890	14	Fusion	ENSG00000258944.1_ENSG00000133961.21	novel	3604	13	NA	NA	0	-694	multi-exon	FALSE	canonical	2	6	junction_1	79.5911148441217	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCAGAGATGCAAACACTG	31	True	NA	NA	False	AAAACA	-15	NA	73458522	73272875	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr14_-_73272909_73273938_73277294_73279280_73279425_73282358_73282506_73284080_73284375_73287109_73287315_73292733_73292875_73297210_73297286_73316389_73316423_73323129_73323205_73355625_73355767_73366896_73366982_73409936_73410069_73458492
H1_mix_00026739	chr14	-	3610	13	FSM	ENSG00000133961.21	ENST00000555238.6	3604	13	0	-6	0	0	multi-exon	FALSE	canonical	3	167	junction_1	50.7772915123811	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCATGAAGGGCTGTTCTT	7	True	NA	-21	True	AATAAA	-21	NA	73458546	73275209	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_73277294_73279280_73279425_73282358_73282506_73284080_73284375_73287109_73287315_73292733_73292875_73297210_73297286_73316389_73316423_73323129_73323205_73355625_73355767_73366896_73366982_73409936_73410069_73458492
H1_mix_00026740	chr14	-	3321	10	NIC	ENSG00000133961.21	novel	3607	11	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	100	junction_1	86.531946573377	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCCCATGAAGGGCTGT	30	True	NA	-25	True	AATAAA	-17	NA	73458523	73275213	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_73277294_73282358_73282506_73284080_73284375_73287109_73287315_73292733_73292875_73297210_73297286_73323129_73323205_73355625_73355767_73409936_73410069_73458492
H1_mix_00026742	chr14	-	3487	12	NNC	ENSG00000133961.21	novel	3604	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_4	80.2380755024108	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGCCCATGAAGGGCT	30	True	NA	-27	True	AATAAA	-15	NA	73458523	73275215	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_73277294_73279280_73279425_73282358_73282506_73284080_73284366_73287109_73287315_73292733_73292875_73297210_73297286_73316389_73316423_73323129_73323205_73355625_73355767_73409936_73410069_73458492
H1_mix_00026748	chr14	-	334	2	FSM	ENSG00000258603.5	ENST00000617980.1	408	2	14	60	14	-60	multi-exon	FALSE	canonical	2	2	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGAGCCTTTGGCTCAC	515	False	NA	NA	False	AAGAAA	-36	NA	73633927	73619749	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_73619817_73633660
H1_mix_00026749	chr14	-	255	1	Intergenic	novelGene_447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAGAAGGAGAAAAACAGG	5657	False	NA	NA	False	ACTAAA	-7	NA	73708753	73708498	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_-_73708500_73708800
H1_mix_00026750	chr14	-	7804	13	FSM	ENSG00000156030.14	ENST00000423556.7	7809	13	5	0	0	0	multi-exon	FALSE	canonical	3	4	junction_12	4.93288286231625	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGAATGCTTTGTTCTC	-11	True	NA	-1	True	ATTAAA	-19	NA	73760298	73715121	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_73719009_73719304_73719502_73721296_73721510_73722697_73722848_73725271_73725361_73726032_73726109_73726603_73726708_73726829_73726973_73727457_73727525_73729639_73729986_73736997_73737298_73738559_73740256_73759762
H1_mix_00026753	chr14	-	2203	18	NIC	ENSG00000119688.21	novel	3035	19	NA	NA	0	32	combination_of_known_junctions	FALSE	canonical	3	26	junction_17	107.45717743687	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATCTTTTTTATTGAATC	151	False	NA	1	True	ATTAAA	-35	NA	74302916	74285963	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_74286530_74286700_74286817_74287809_74287887_74288206_74288260_74288715_74288766_74289482_74289520_74290026_74290119_74290290_74290500_74292286_74292377_74292550_74292643_74292747_74292870_74293153_74293249_74295147_74295199_74295853_74295980_74296332_74296450_74297929_74298070_74299547_74299676_74302874
H1_mix_00026755	chr14	-	2165	18	NNC	ENSG00000119688.21	novel	3035	19	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_17	124.757231381619	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTACAGCTTTCTGTCT	151	False	NA	-32	True	ATTAAA	-2	NA	74302916	74285996	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_74286530_74286700_74286817_74287809_74287887_74288206_74288260_74288715_74288766_74289482_74289520_74290026_74290119_74290290_74290500_74292286_74292377_74292550_74292643_74292747_74292870_74293153_74293249_74295147_74295199_74295853_74295975_74296332_74296450_74297929_74298070_74299547_74299676_74302874
H1_mix_00026765	chr14	-	5502	21	NIC	ENSG00000119682.18	novel	5505	21	NA	NA	0	5	combination_of_known_junctions	TRUE	canonical	1	1	junction_19	21.5578292042589	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGAGTGGCTGCTTTAAA	25	False	NA	-3	True	AATAAA	-18	NA	74713067	74661250	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_74663823_74663898_74664075_74664835_74664926_74667318_74667378_74667464_74667595_74669648_74669775_74669946_74670127_74670761_74670872_74671407_74671484_74672830_74672953_74673076_74673219_74674033_74674112_74675698_74675947_74676140_74676322_74676582_74676753_74683295_74683534_74684453_74684681_74685599_74685661_74692040_74692329_74698763_74698857_74712932
H1_mix_00026768	chr14	-	3262	12	FSM	ENSG00000198208.12	ENST00000555647.5	3309	12	47	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	9.75230424138465	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTGTTCTCGCTTCTTCCA	-11	True	NA	-5	True	AATAAA	-16	NA	74923255	74905642	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_74907125_74907434_74907531_74908849_74908933_74909100_74909191_74909542_74910149_74911247_74911381_74911793_74911842_74918512_74918606_74919844_74919970_74921276_74921562_74922340_74922486_74923179
H1_mix_00026773	chr14	-	6172	22	FSM	ENSG00000119638.14	ENST00000678037.1	6172	22	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	32.684501587005	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAACCTCACAGAATGAT	7904	False	NA	-27	True	AATAAA	-11	NA	75126964	75081410	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_75084687_75087017_75087231_75088479_75088642_75091269_75091479_75095371_75095432_75097099_75097271_75100991_75101154_75101656_75101766_75103841_75103998_75105949_75105997_75106465_75106703_75107342_75107488_75109684_75109878_75110320_75110372_75113338_75113404_75114202_75114314_75117194_75117327_75118829_75118936_75120509_75120581_75121118_75121175_75124045_75124224_75126702
H1_mix_00026777	chr14	-	375	1	FSM	ENSG00000242951.1	ENST00000489251.1	402	1	151	-124	151	124	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGTTTGCTGTCAATAG	174	False	NA	NA	False	AAAAAG	-22	NA	75596055	75595680	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_75595700_75596100
H1_mix_00026780	chr14	-	6531	11	NIC	ENSG00000013523.11	novel	5287	10	NA	NA	-137	4270	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	63.5282614274938	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTATGTCCTGTGCTGGT	151	False	NA	-5	True	AATAAA	-12	NA	76812705	76781738	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_76782777_76786084_76789389_76790610_76790775_76791296_76791367_76803370_76803482_76803785_76803913_76806415_76806850_76807432_76807503_76807921_76808149_76809058_76809644_76812304
H1_mix_00026781	chr14	-	1120	2	FSM	ENSG00000258819.2	ENST00000660008.1	1768	2	0	648	0	-637	multi-exon	FALSE	canonical	1	1	junction_1	0	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGGGCTGCACACCCAC	-7	True	NA	NA	False	NA	NA	NA	77076194	77069816	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_77070847_77076104
H1_mix_00026782	chr14	-	5649	20	FSM	ENSG00000009830.13	ENST00000452340.7	5647	20	0	-2	0	0	multi-exon	FALSE	canonical	3	82	junction_12	16.066344444917	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGTTGTCCTTGTACT	519	False	NA	-3	True	AATAAA	-17	NA	77320704	77274955	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_77277482_77278393_77278509_77278728_77279929_77280020_77280081_77280391_77280464_77283796_77283874_77284949_77285042_77285480_77285633_77286743_77286823_77288761_77288832_77291313_77291381_77296163_77296274_77298688_77298772_77299454_77299562_77301089_77301250_77302834_77302944_77304691_77304801_77306336_77306442_77311948_77312034_77320433
H1_mix_00026784	chr14	-	4181	16	NIC	ENSG00000009830.13	novel	4875	21	NA	NA	8	0	intron_retention	FALSE	canonical	3	13	junction_15	33.755723794475	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGTTGTCCTTGTACT	490	False	NA	-3	True	AATAAA	-17	NA	77320733	77274955	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_77277482_77278393_77278509_77278728_77278870_77279822_77279929_77280020_77280081_77280391_77280464_77283796_77283874_77284949_77285042_77285480_77285633_77286743_77286823_77288761_77288832_77291313_77291381_77296163_77296274_77304691_77304801_77306336_77306442_77320433
H1_mix_00026788	chr14	-	989	9	NIC	ENSG00000009830.13	novel	1686	18	NA	NA	10	-2	combination_of_known_junctions	FALSE	canonical	2	4	junction_6	35.6957630538976	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTAAGTAAGCAACGGGGA	529	False	NA	NA	False	NA	NA	NA	77320694	77286745	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_77286823_77288761_77288832_77291313_77291381_77296163_77296274_77298688_77298772_77299454_77299562_77304691_77304801_77306336_77306442_77320433
H1_mix_00026790	chr14	-	3222	20	FSM	ENSG00000151445.16	ENST00000553888.5	2934	20	-296	8	51	-8	multi-exon	FALSE	canonical	3	16	junction_19	22.2668281160346	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCCTTCTCTCCCGCTCCT	614	False	NA	-23	True	AATAAA	-16	NA	77457901	77426682	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_77427637_77428369_77428475_77429005_77429096_77429680_77429768_77433841_77433932_77434261_77434304_77435258_77435394_77435843_77435920_77437807_77437882_77441065_77441094_77442559_77442663_77443118_77443153_77444248_77444342_77448493_77448551_77449292_77449358_77449713_77449753_77451186_77451334_77453298_77453402_77454009_77454103_77457094
H1_mix_00026791	chr14	-	1061	12	NIC	ENSG00000151445.16	novel	444	5	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	30.8451209691793	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGTTGTATTATTAAAAC	26	True	NA	5	True	AATAAA	-20	NA	77457556	77440259	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_77440497_77441065_77441094_77442559_77442663_77443118_77443153_77444248_77444342_77448493_77448551_77449292_77449358_77449713_77449753_77451186_77451334_77453298_77453402_77454009_77454103_77457494
H1_mix_00026793	chr14	-	497	3	FSM	ENSG00000100601.10	ENST00000554097.1	497	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	43	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGAGATACCTTTTTTTT	3567	False	NA	NA	False	AATAAA	-16	NA	77704452	77691732	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_77691983_77694737_77694901_77704368
H1_mix_00026794	chr14	-	1966	14	FSM	ENSG00000100603.14	ENST00000556428.5	1966	14	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_13	179.83361804044	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTTTTGTGTAAGAACAG	NA	False	NA	NA	False	NA	NA	NA	77761207	77717790	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_77718287_77718366_77718531_77720710_77720829_77723180_77723278_77730987_77731130_77732484_77732602_77734946_77735013_77735936_77736007_77736970_77737076_77738777_77738885_77738965_77739062_77751318_77751481_77754966_77755099_77761113
H1_mix_00026795	chr14	-	5081	26	NIC	ENSG00000100629.17	novel	4614	25	NA	NA	-42	-10	combination_of_known_splicesites	TRUE	canonical	1	5	junction_1	9.79795897113271	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTAAAATCATGAAGGATT	NA	False	NA	-23	True	AATAAA	-19	NA	80941780	80476992	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_80478408_80497468_80497583_80504911_80505021_80526868_80526983_80530808_80530887_80559278_80559303_80580373_80580424_80743074_80743268_80756891_80756952_80761436_80761614_80777881_80778047_80784894_80785546_80792759_80793111_80831142_80831295_80836204_80836338_80838203_80838279_80840681_80840769_80862756_80862874_80895717_80895791_80899937_80900030_80904812_80904932_80905954_80906082_80914321_80914409_80916400_80916563_80939384_80939541_80941580
H1_mix_00026796	chr14	-	355	2	FSM	ENSG00000100629.17	ENST00000557377.1	451	2	0	96	0	-96	multi-exon	FALSE	canonical	3	52	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGCACTTGTGAAAGAAAA	NA	False	NA	-120	True	NA	NA	NA	80530960	80526779	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_80526983_80530808
H1_mix_00026797	chr14	-	10716	7	NIC	ENSG00000140022.14	novel	11084	9	NA	NA	1	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	9.35859676091097	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTATGCCAAATTTAATG	0	True	NA	77	True	AATAAA	-19	NA	81436464	81260649	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_81268498_81270669_81270873_81276900_81278740_81395893_81396179_81398294_81398581_81427101_81427213_81436320
H1_mix_00026799	chr14	-	10901	8	NIC	ENSG00000140022.14	novel	11084	9	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_5	7.38724769934165	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCACTATGCCAAATTTAA	11	True	NA	75	True	AATAAA	-17	NA	81436453	81260651	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_81268498_81270669_81270873_81276900_81278740_81370987_81371186_81395893_81396179_81398294_81398581_81427101_81427213_81436320
H1_mix_00026802	chr14	-	421	4	NNC	ENSG00000258977.2	novel	789	4	NA	NA	9610	-1	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_3	38.7900330841141	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCAATTAATTTCACAATG	8	True	NA	-8	True	AATAAA	-22	NA	81613454	81605347	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_81605555_81607131_81607199_81607623_81607702_81613385
H1_mix_00026803	chr14	-	379	3	NNC	ENSG00000258977.2	novel	789	4	NA	NA	9609	-1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	60	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCAATTAATTTCACAATG	7	True	NA	-8	True	AATAAA	-22	NA	81613455	81605347	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_81605555_81607131_81607199_81613350
H1_mix_00026804	chr14	-	1926	3	Intergenic	novelGene_451	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	5	junction_2	18	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAGATATTATCATATGA	NA	False	NA	NA	False	AATAAA	-22	NA	85671850	85665421	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_-_85666378_85670673_85670824_85671030
H1_mix_00026806	chr14	-	1642	3	Intergenic	novelGene_452	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	25	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGAAAATCTTTATTCTT	NA	False	NA	-9	True	ATTAAA	-17	NA	85738310	85725286	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_-_85726484_85737735_85737912_85738041
H1_mix_00026807	chr14	-	2730	3	Intergenic	novelGene_453	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	11.5	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACCCCATATTCAAATCC	3743	False	NA	NA	False	TATAAA	-30	NA	87240571	87215830	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_-_87216081_87216546_87216680_87238224
H1_mix_00026813	chr14	-	4008	17	FSM	ENSG00000070778.13	ENST00000554270.5	4008	17	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_6	10.1132261791181	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTAACCTGGGAAAGGTG	4448	False	NA	NA	False	NA	NA	NA	88550530	88467954	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_88468266_88468915_88469077_88469498_88470051_88472243_88472466_88473664_88473803_88478919_88480353_88485075_88485161_88485781_88485843_88496412_88496493_88497202_88497291_88500782_88500872_88501280_88501369_88504424_88504496_88505303_88505372_88507922_88508021_88517091_88517262_88550237
H1_mix_00026814	chr14	-	576	3	FSM	ENSG00000070778.13	ENST00000557249.1	576	3	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	7	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAACAGGGAATTGCAATTA	-3	True	NA	NA	False	NA	NA	NA	88473932	88469964	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_88470051_88472243_88472466_88473664
H1_mix_00026815	chr14	-	401	5	FSM	ENSG00000165521.16	ENST00000553962.1	627	5	226	0	226	0	multi-exon	FALSE	canonical	2	7	junction_3	1.5	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGGGAGTATGTTCAGTC	NA	False	NA	NA	False	AATGAA	-36	NA	88644511	88627747	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_88627820_88634468_88634490_88638808_88638908_88642892_88643023_88644432
H1_mix_00026820	chr14	-	656	6	NNC	ENSG00000140025.16	novel	698	6	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_5	66.5954953431537	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTGTGGGTACATAGT	16	True	NA	-13	True	ATTAAA	-16	NA	89954718	89797126	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_89797325_89931540_89931632_89932525_89932628_89950096_89950143_89953905_89954002_89954595
H1_mix_00026821	chr14	-	3359	19	NIC	ENSG00000165914.15	novel	19471	20	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_15	24.1620685280784	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATAGCCTGTGTCATTCG	27	False	NA	-3	True	AATAAA	-17	NA	90816468	90540587	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_90541590_90578105_90578309_90593485_90593627_90610741_90610840_90617928_90618046_90644047_90644209_90646950_90647024_90652840_90652899_90654992_90655111_90657173_90657279_90658303_90658388_90676522_90676661_90680471_90680536_90689539_90689713_90695499_90695579_90744791_90744923_90780737_90780903_90786173_90786329_90816174
H1_mix_00026824	chr14	-	344	2	FSM	ENSG00000015133.20	ENST00000554051.1	478	2	134	0	134	0	multi-exon	FALSE	canonical	3	57	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAAGGAGAAGCTGCACG	NA	False	NA	NA	False	NA	NA	NA	91338722	91338053	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_91338164_91338488
H1_mix_00026825	chr14	-	3176	12	NIC	ENSG00000100796.18	novel	4108	15	NA	NA	27	-1	combination_of_known_junctions	FALSE	canonical	3	33	junction_3	202.238138002727	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATCACCTGTCACCTTAT	NA	False	NA	-6	True	AATAAA	-15	NA	91481971	91457508	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_91458870_91461380_91461608_91462048_91462222_91462734_91462878_91465249_91465420_91470836_91470996_91473032_91473136_91473238_91473371_91475849_91475967_91476407_91476525_91476908_91476987_91481575
H1_mix_00026826	chr14	-	4699	16	NIC	ENSG00000100796.18	novel	2515	15	NA	NA	1	-1	intron_retention	FALSE	canonical	3	54	junction_6	211.863373165087	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATCACCTGTCACCTTAT	11	True	NA	-6	True	AATAAA	-15	NA	91510477	91457508	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_91458870_91461380_91461608_91462048_91462240_91462734_91462878_91465249_91465420_91466260_91466417_91470836_91470996_91473032_91473136_91473238_91473371_91475849_91475967_91476407_91476525_91476908_91476987_91481575_91482194_91485631_91485731_91490746_91490803_91509505
H1_mix_00026827	chr14	-	4173	16	NIC	ENSG00000100796.18	novel	4108	15	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	77	junction_15	168.948065655955	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATCACCTGTCACCTTAT	11	True	NA	-6	True	AATAAA	-15	NA	91510477	91457508	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_91458870_91461380_91461608_91462048_91462240_91462734_91462878_91465249_91465420_91470836_91470996_91473032_91473136_91473238_91473371_91475849_91475967_91476407_91476525_91476908_91476987_91481575_91482194_91485631_91485731_91490746_91490803_91509505_91509705_91510074
H1_mix_00026828	chr14	-	4212	16	NIC	ENSG00000100796.18	novel	4416	15	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	77	junction_15	185.532027783166	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATCACCTGTCACCTTAT	11	True	NA	-6	True	AATAAA	-15	NA	91510477	91457508	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_91458870_91461380_91461608_91462048_91462240_91462734_91462878_91465249_91465420_91470836_91470996_91473032_91473136_91473238_91473371_91475810_91475967_91476407_91476525_91476908_91476987_91481575_91482194_91485631_91485731_91490746_91490803_91509505_91509705_91510074
H1_mix_00026834	chr14	-	346	1	FSM	ENSG00000268295.1	ENST00000594073.1	261	1	30	-115	30	115	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGCAAAAGACACAGGCAA	NA	False	NA	NA	False	AATAAA	-28	NA	91603403	91603057	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_91603100_91603400
H1_mix_00026835	chr14	-	7427	1	FSM	ENSG00000260711.2	ENST00000565058.2	6943	1	-1795	1311	-1795	-1311	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTGGCTACAATCTCTG	1680	False	NA	NA	False	NA	NA	NA	91761593	91754166	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_91754200_91761600
H1_mix_00026838	chr14	-	565	3	FSM	ENSG00000066427.25	ENST00000568290.1	671	3	110	-4	110	4	multi-exon	FALSE	canonical	2	2	junction_2	1.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAGAATAAAGCTGTGCC	NA	False	NA	-33	True	NA	NA	NA	92050536	92044801	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_92044959_92049602_92049815_92050340
H1_mix_00026839	chr14	-	6774	9	FSM	ENSG00000066427.25	ENST00000393287.9	6770	9	0	-4	0	4	multi-exon	FALSE	canonical	2	6	junction_6	69.3197978574664	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGAATTTGTGTTTATT	NA	False	NA	-6	True	AATAAA	-24	NA	92106621	92058547	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_92064415_92070934_92071054_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92096092_92096138_92096673_92096839_92106528
H1_mix_00026847	chr14	-	1708	2	ISM	ENSG00000133937.5	ENST00000238558.5	1140	3	-125	0	-125	0	intron_retention	FALSE	canonical	3	129	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGGGCCACATTCTGTATT	-12	True	NA	-8	True	AATAAA	-15	NA	94770238	94768222	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_-_94768650_94768957
H1_mix_00026855	chr14	-	4710	4	NIC	ENSG00000197119.13	novel	2291	4	NA	NA	177	0	intron_retention	FALSE	canonical	3	97	junction_2	253.683967872539	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCGAGGCTGCCTTTGCA	285	False	NA	-19	True	AATAAA	-19	NA	100306247	100291115	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_100293033_100293293_100295994_100298841_100298886_100306198
H1_mix_00026856	chr14	-	1540	3	FSM	ENSG00000197119.13	ENST00000556505.5	1540	3	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_2	232	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGACCCTGCACCCTCCGG	3122	False	NA	NA	False	NA	NA	NA	100295734	100291685	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_100293033_100293293_100293378_100295625
H1_mix_00026860	chr14	-	1060	5	FSM	ENSG00000140105.18	ENST00000553808.5	1060	5	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_4	344.84951428123	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGGCCTGCTACTTCTC	0	True	NA	NA	False	NA	NA	NA	100375473	100354192	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_100354567_100360553_100360663_100361707_100361922_100369086_100369259_100375282
H1_mix_00026873	chr14	-	3510	12	FSM	ENSG00000080824.19	ENST00000334701.11	3510	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_11	1169.78661612823	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTGTGTGACAGTGTCTT	-11	True	NA	-8	True	AATACA	-14	NA	102139686	102081048	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_102081822_102082110_102082445_102083033_102083303_102083545_102083694_102083792_102083984_102084398_102084565_102084680_102084999_102085297_102085432_102085757_102086125_102086216_102086379_102101874_102102086_102139249
H1_mix_00026875	chr14	-	1661	10	FSM	ENSG00000080823.23	ENST00000523485.5	2705	10	1035	9	1035	-1	multi-exon	FALSE	canonical	1	2	junction_6	23.1324687638633	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTGCATTTTAATGTTT	NA	False	NA	-19	True	ATTAAA	-18	NA	102263616	102228839	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_102229367_102229456_102229658_102231706_102231822_102232534_102232709_102233687_102233790_102250811_102250988_102251443_102251611_102251755_102251805_102251916_102251996_102263545
H1_mix_00026890	chr14	-	5672	2	FSM	ENSG00000166170.12	ENST00000337322.5	1960	2	-638	-3074	-279	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGAGTCTGAGGTGTGTG	NA	False	NA	-1	True	AATAAA	-32	NA	103562936	103556544	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_103561193_103561912
H1_mix_00026898	chr14	-	1667	2	FSM	ENSG00000088808.18	ENST00000555825.5	3137	2	1470	0	1470	0	multi-exon	FALSE	canonical	3	21	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGCTGTGAGTCTTCTTTC	3016	False	NA	-2	True	AATAAA	-15	NA	103736226	103733752	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_103735196_103736002
H1_mix_00026900	chr14	-	272	3	FSM	ENSG00000156411.10	ENST00000553449.1	271	3	0	-1	0	0	multi-exon	FALSE	canonical	3	47	junction_2	1952.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTACCTGGTACTGCTTT	-15	True	NA	-13	True	AATAAA	-18	NA	103921538	103912515	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_103912695_103913960_103913985_103921469
H1_mix_00026901	chr14	-	2834	6	FSM	ENSG00000142208.18	ENST00000553506.5	2830	6	0	-4	0	1	multi-exon	FALSE	canonical	3	800	junction_5	58.4650322842637	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGCTCACTTTGCTGGG	NA	False	NA	-1	True	AATAAA	-16	NA	104774680	104769347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_104770421_104770744_104770848_104772364_104772453_104772877_104773093_104773250_104773380_104773454
H1_mix_00026904	chr14	-	2587	13	FSM	ENSG00000142208.18	ENST00000682269.1	2587	13	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_12	259.837596180554	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCCCTGCCCTCCAAGG	1	True	NA	NA	False	NA	NA	NA	104795743	104771554	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_104772453_104772877_104773093_104773250_104773380_104773454_104773581_104773911_104773981_104774937_104775004_104775075_104775208_104775651_104775800_104776658_104776771_104780087_104780217_104792597_104792723_104793126_104793305_104795483
H1_mix_00026910	chr14	-	1468	4	FSM	ENSG00000185024.18	ENST00000548421.2	1452	4	0	-16	0	16	multi-exon	FALSE	canonical	3	39	junction_1	8.9566858950296	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTATTTCTTTTGACCTT	17	True	NA	12	True	ATTAAA	-34	NA	105301278	105256169	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_105256550_105272720_105272895_105286295_105286377_105300445
H1_mix_00026912	chr14	+	449	1	Intergenic	novelGene_426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGGAAACAGAACAACAACAA	NA	False	NA	NA	False	NA	NA	NA	32268188	32268637	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_32268200_32268600
H1_mix_00026913	chr14	+	442	1	Intergenic	novelGene_427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAAAGTAGACTGAATTC	NA	False	NA	NA	False	AATGAA	-13	NA	32271379	32271821	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_32271400_32271800
H1_mix_00026915	chr14	+	546	1	Intergenic	novelGene_438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACTACCAGAAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	50465856	50466402	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_50465900_50466400
H1_mix_00026916	chr14	+	4716	1	Intergenic	novelGene_440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGGGGCCTACTTGAGG	NA	False	NA	NA	False	AGTAAA	-27	NA	58111174	58115890	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_58111200_58115900
H1_mix_00026917	chr14	+	1692	1	Intergenic	novelGene_444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	856	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACACACACACACACGCA	NA	False	NA	NA	False	NA	NA	NA	70532416	70534108	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_70532400_70534100
H1_mix_00026918	chr14	+	302	1	Intergenic	novelGene_445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTGTAGTTTTAGTAC	NA	False	NA	NA	False	NA	NA	NA	73490317	73490619	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_73490300_73490600
H1_mix_00026919	chr14	+	384	1	Intergenic	novelGene_448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCTCAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80534436	80534820	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_80534400_80534800
H1_mix_00026920	chr14	+	1070	1	Intergenic	novelGene_455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	320	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	90659351	90660421	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_90659400_90660400
H1_mix_00026928	chr14	+	469	3	FSM	ENSG00000258604.1	ENST00000532213.2	469	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTTATGTTGTCCACA	-3	True	NA	NA	False	NA	NA	NA	21024295	21029271	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_21024345_21028445_21028535_21028940
H1_mix_00026929	chr14	+	5531	23	NNC	ENSG00000165801.10	novel	5893	24	NA	NA	-384	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_20	78.5705452349186	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATTCTGAGGTGTCACA	74	False	NA	NA	False	NA	NA	NA	21069888	21089414	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_21070400_21073044_21073243_21073931_21075181_21075331_21075500_21075644_21075766_21076359_21076457_21076562_21076644_21076773_21076891_21078176_21078273_21078372_21078489_21078883_21079011_21080659_21080783_21080872_21081017_21081319_21082120_21082243_21082479_21082830_21082918_21083834_21084051_21084752_21084924_21085688_21085867_21087000_21087106_21087955_21088099_21088829_21088877_21089013
H1_mix_00026930	chr14	+	5217	24	FSM	ENSG00000165801.10	ENST00000553709.5	5204	24	-13	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	78.1491714970228	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCCTCTAAGGAGCTAG	11	True	NA	21	True	ATTAAA	-15	NA	21070303	21089545	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_21070400_21073044_21073243_21073931_21075181_21075331_21075500_21075644_21075766_21076359_21076457_21076535_21076644_21076773_21076891_21078176_21078273_21078372_21078489_21078883_21079011_21080659_21080783_21080872_21081017_21081508_21082120_21082243_21082479_21082830_21082918_21083834_21084051_21084752_21084924_21085688_21085867_21087000_21087106_21087319_21087464_21087967_21088099_21088829_21088877_21089013
H1_mix_00026931	chr14	+	667	2	ISM	ENSG00000232070.9	ENST00000556585.2	1236	7	1584	10	304	-10	3prime_fragment	FALSE	canonical	3	14	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCCGCGGTAGGGGCGCT	1576	False	NA	3	True	AATAAA	-8	NA	21102686	21103712	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_+_21102780_21103138
H1_mix_00026932	chr14	+	358	2	FSM	ENSG00000178107.2	ENST00000320322.2	358	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTTGTATTTTATCAA	4126	False	NA	NA	False	AATAAA	-23	NA	21108042	21116703	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_21108160_21116462
H1_mix_00026934	chr14	+	341	1	FSM	ENSG00000260830.1	ENST00000565098.1	629	1	230	58	230	-58	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCCCCCAAATAACCGTTA	255	False	NA	NA	False	NA	NA	NA	21384521	21384862	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_21384500_21384900
H1_mix_00026936	chr14	+	983	5	FSM	ENSG00000166091.21	ENST00000359320.7	1200	5	217	0	-12	0	multi-exon	FALSE	canonical	1	1	junction_4	1.58113883008419	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGAGTCTCTTTCTTCC	-5	True	NA	NA	False	ATTAAA	-15	NA	23377024	23379772	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23377378_23378348_23378502_23379030_23379124_23379298_23379384_23379473
H1_mix_00026937	chr14	+	1038	3	FSM	ENSG00000129460.16	ENST00000556378.5	803	3	-213	-22	-213	22	multi-exon	FALSE	canonical	3	488	junction_1	209	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATAGTGAGACCCTACAA	NA	False	NA	NA	False	NA	NA	NA	23469475	23471631	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23469728_23470041_23470102_23470905
H1_mix_00026940	chr14	+	573	1	FSM	ENSG00000274002.1	ENST00000610501.1	812	1	114	125	114	-125	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTATTTTCTCCCAGAG	NA	False	NA	NA	False	NA	NA	NA	23619314	23619887	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_23619300_23619900
H1_mix_00026941	chr14	+	697	4	NNC	ENSG00000157326.19	novel	1340	4	NA	NA	103	-3154	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	140.376477928304	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGTTTCAATGGTTCAT	138	False	NA	NA	False	TATAAA	-20	NA	23953891	23964969	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_23953917_23955034_23955213_23959901_23960004_23964577
H1_mix_00026945	chr14	+	2012	10	FSM	ENSG00000100889.12	ENST00000561286.5	2012	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	175.077760501505	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAAGATTTGTGCTGTTT	-1	True	NA	12	True	NA	NA	NA	24094310	24104124	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24094435_24094765_24094846_24098202_24098388_24098474_24098679_24099048_24099237_24099557_24099721_24099994_24100214_24102752_24102891_24103159_24103256_24103509
H1_mix_00026949	chr14	+	747	2	FSM	ENSG00000259321.1	ENST00000558478.1	747	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCGGGCATGGTGGCGC	2120	False	NA	NA	False	AATAAA	-32	NA	24139444	24140444	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24139477_24139729
H1_mix_00026951	chr14	+	1957	14	FSM	ENSG00000092098.17	ENST00000491351.6	1957	14	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	41.6822298350708	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTTGGTGGTCCTTCTT	2838	False	NA	20	True	AATAAA	-20	NA	24150815	24160660	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24150889_24151130_24151380_24151484_24151671_24151785_24151993_24155156_24155331_24155413_24155513_24155602_24155693_24157289_24157405_24157519_24157639_24157831_24158012_24158141_24158200_24159863_24159961_24160238_24160408_24160519
H1_mix_00026952	chr14	+	465	1	FSM	ENSG00000276698.1	ENST00000610486.1	658	1	-95	288	-95	-288	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTGTATATGTTAGGC	5	False	NA	NA	False	NA	NA	NA	24198337	24198802	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24198300_24198800
H1_mix_00026953	chr14	+	4110	2	FSM	ENSG00000213903.9	ENST00000396789.4	4110	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTTCCGGTATTTTTGA	210	False	NA	12	True	AATAAA	-23	NA	24313310	24318036	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_24315021_24315636
H1_mix_00026954	chr14	+	3989	9	NNC	ENSG00000100968.14	novel	3057	10	NA	NA	19	0	intron_retention	FALSE	canonical	3	8	junction_4	31.156610454284	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGGCTCCAGAGCTCTT	26	False	NA	18	True	AATAAA	-18	NA	24368204	24378056	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_24368441_24369498_24370595_24372440_24372604_24373170_24373371_24373660_24373868_24374325_24374467_24375659_24375716_24375974_24376102_24376293
H1_mix_00026955	chr14	+	3415	3	NNC	ENSG00000258744.3	novel	2712	3	NA	NA	35	-26635	at_least_one_novel_splicesite	FALSE	non_canonical	2	12	junction_1	2.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGTGTGCACCTATTAT	11	False	NA	NA	False	ATTAAA	-28	NA	24443050	24477356	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_24443113_24445389_24445572_24474185
H1_mix_00026956	chr14	+	3793	14	NIC	ENSG00000092140.16	novel	5770	15	NA	NA	21	2	combination_of_known_junctions	FALSE	canonical	2	5	junction_7	119.02478484872	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGCTTTGGTTGAATTT	16	True	NA	10	True	ATTAAA	-11	NA	30559180	30618227	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_30559273_30581075_30581117_30586717_30586816_30589382_30589485_30592322_30592448_30593473_30593640_30597419_30597527_30601769_30601895_30601998_30602132_30605504_30605813_30607887_30608070_30612206_30612380_30615348_30615540_30616277
H1_mix_00026957	chr14	+	2012	24	FSM	ENSG00000092108.22	ENST00000676658.1	1995	24	-17	0	-4	0	multi-exon	FALSE	canonical	0	0	junction_22	110.962382290368	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCCTAACAGTGAAAATCAG	NA	False	NA	NA	False	AAAAAG	-44	NA	30622286	30735706	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30734789_30734859_30735585
H1_mix_00026958	chr14	+	2582	11	FSM	ENSG00000100473.18	ENST00000216361.9	2582	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	89.8615045500575	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCATAGCTCAATAAAAGAA	5	True	NA	-12	True	ACTAAA	-18	NA	30874513	30890100	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_30874973_30875055_30875299_30877571_30877729_30878810_30878945_30879422_30879486_30880451_30880497_30880586_30880735_30884552_30884657_30885393_30885621_30885795_30886313_30889615
H1_mix_00026959	chr14	+	446	5	FSM	ENSG00000100478.16	ENST00000313566.11	1502	5	0	1056	0	51	multi-exon	FALSE	canonical	3	36	junction_2	4.14578098794425	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGGTCCTTATCAGGTA	112	False	NA	NA	False	NA	NA	NA	31025761	31080627	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_31025788_31066125_31066335_31069842_31069930_31072904_31072974_31080572
H1_mix_00026960	chr14	+	4181	10	FSM	ENSG00000151320.11	ENST00000557354.5	5259	10	0	1078	0	770	multi-exon	FALSE	canonical	0	0	junction_1	2.21665970480667	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCTCTTCATGTACCTT	-12	True	NA	NA	False	GATAAA	-26	NA	32329343	32733535	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_32329409_32433459_32433818_32535553_32535806_32545229_32547000_32577119_32577243_32599409_32599507_32600628_32600793_32678310_32678460_32695989_32696111_32732453
H1_mix_00026961	chr14	+	1103	1	FSM	ENSG00000206596.1	ENST00000383869.1	164	1	19	-958	19	958	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAGACTCCGTCTCAAAA	NA	False	NA	NA	False	NA	NA	NA	34546732	34547835	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_34546700_34547800
H1_mix_00026963	chr14	+	3857	6	NNC	ENSG00000151327.13	novel	3053	5	NA	NA	251	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	167.843260216191	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAATGGTTTGTCTTACTT	220	False	NA	16	True	TATAAA	-17	NA	35045367	35083378	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_35046404_35046503_35046629_35053277_35053452_35077149_35077217_35078926_35079025_35081021
H1_mix_00026965	chr14	+	1406	7	FSM	ENSG00000100890.16	ENST00000605870.5	1406	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	106.129899441937	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGAATCATTTATCGTCC	43	False	NA	-36	True	NA	NA	NA	35122721	35274017	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_35122911_35126734_35126783_35127478_35127612_35180669_35180778_35266726_35266876_35270400_35270597_35273434
H1_mix_00026967	chr14	+	435	1	FSM	ENSG00000259022.2	ENST00000554535.2	372	1	-80	17	-80	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGCAGCATGAGTGACCA	430	False	NA	NA	False	AGTAAA	-3	NA	35430179	35430614	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_35430200_35430600
H1_mix_00026968	chr14	+	762	1	FSM	ENSG00000188831.4	ENST00000557188.1	1219	1	457	0	210	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGTAAAGTCTTTGACT	NA	False	NA	NA	False	AATAAA	-35	NA	36371621	36372383	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_36371600_36372400
H1_mix_00026969	chr14	+	450	3	FSM	ENSG00000139865.16	ENST00000554555.1	535	3	4	81	4	-81	multi-exon	FALSE	canonical	1	2	junction_2	0.5	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTAGGTGCAGCAAACCA	NA	False	NA	NA	False	AAAACA	-37	NA	37796297	37802309	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_37796371_37796786_37796948_37802093
H1_mix_00026970	chr14	+	10215	2	NNC	ENSG00000258649.2	novel	859	3	NA	NA	0	3781	intron_retention	FALSE	canonical	2	10	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTTTTCTTCTTTTGTA	1	True	NA	NA	False	AATAAA	-27	NA	38190982	38206706	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_38191232_38196740
H1_mix_00026971	chr14	+	982	4	NIC	ENSG00000258649.2	novel	1017	4	NA	NA	13	1	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	14.3836326735943	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTAGACTCCTGCCTCAAC	14	False	NA	17	True	AATAAA	-25	NA	38190995	38202924	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_38191232_38193183_38193324_38199045_38199512_38202784
H1_mix_00026972	chr14	+	835	3	FSM	ENSG00000258649.2	ENST00000693073.1	856	3	21	0	21	0	multi-exon	FALSE	canonical	3	31	junction_1	2	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGACTCCTGCCTCAACA	22	False	NA	18	True	AATAAA	-26	NA	38191003	38202925	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_38191232_38199045_38199512_38202784
H1_mix_00026973	chr14	+	1108	3	FSM	ENSG00000258649.2	ENST00000689498.1	859	3	30	-279	30	279	multi-exon	FALSE	canonical	3	31	junction_1	8	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGCATTTCTTTGTGAT	31	False	NA	21	True	AATAAA	-22	NA	38191012	38203204	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_38191232_38199045_38199512_38202781
H1_mix_00026976	chr14	+	500	2	FSM	ENSG00000258651.1	ENST00000557350.1	500	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTTAGTCAGCCTGTC	478	False	NA	NA	False	NA	NA	NA	39103139	39103812	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_39103372_39103544
H1_mix_00026977	chr14	+	366	1	FSM	ENSG00000258591.2	ENST00000556877.2	366	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAACTCTAATAAGTTTGA	5680	False	NA	NA	False	NA	NA	NA	39108341	39108707	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_39108300_39108700
H1_mix_00026980	chr14	+	2966	22	NIC	ENSG00000150527.18	novel	2762	23	NA	NA	42	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_2	37.2834944300571	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGGCTCTATTAACTTTT	36	True	NA	19	True	AATAAA	-20	NA	39267187	39350694	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_39267523_39276933_39277066_39279448_39279538_39291018_39291097_39293270_39293382_39293999_39294072_39294924_39295030_39299863_39299987_39302128_39302250_39303477_39303525_39304290_39304382_39308448_39308588_39313339_39313442_39314738_39314800_39315682_39315719_39317943_39318012_39319208_39319292_39326863_39327023_39345903_39346027_39347712_39347772_39348742_39348978_39350097
H1_mix_00026983	chr14	+	6416	21	NIC	ENSG00000198718.13	novel	6424	20	NA	NA	43	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_7	6.03551986161921	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTGAGAGGTGTCCTG	42	True	NA	16	True	AATAAA	-17	NA	44962261	45074431	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_44964468_44995745_44995903_44999362_44999498_45004060_45004367_45006007_45006268_45008912_45009146_45011974_45012076_45022909_45022974_45025782_45025873_45027298_45027475_45028175_45028330_45032222_45032377_45043685_45043792_45044634_45044871_45046544_45046704_45052435_45052563_45054430_45054550_45066577_45066768_45068423_45068644_45071711_45071799_45073295
H1_mix_00026984	chr14	+	3362	14	NIC	ENSG00000185246.18	novel	3174	15	NA	NA	2	0	intron_retention	FALSE	canonical	3	64	junction_3	76.0207850743046	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAATTGTTTATGAATTTA	14	True	NA	19	True	AATAAA	-16	NA	45084129	45115596	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_45084250_45095220_45095564_45096102_45096759_45096886_45097006_45102528_45102697_45107450_45107617_45108414_45108523_45109615_45109781_45110093_45110221_45110548_45110818_45112317_45112503_45114182_45114258_45114493_45114615_45114856
H1_mix_00026989	chr14	+	832	6	NNC	ENSG00000125375.18	novel	2944	6	NA	NA	-124	-46	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_5	109.22344070757	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGACAGCACTGCCTTCTC	696	False	NA	-48	True	AAAAAG	-20	NA	50312199	50325677	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_50312390_50314590_50314627_50321482_50321595_50322510_50322720_50323944_50324161_50325608
H1_mix_00026990	chr14	+	3579	5	FSM	ENSG00000125375.18	ENST00000311459.12	3579	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	113.748626365332	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTGGAGATTTCATACC	-6	True	NA	15	True	AATAAA	-25	NA	50312323	50327957	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_50313061_50321482_50321595_50322510_50322720_50323944_50324117_50325608
H1_mix_00026991	chr14	+	582	4	ISM	ENSG00000125375.18	ENST00000557421.7	2944	6	14	5065	9	0	5prime_fragment	FALSE	canonical	3	61	junction_1	112.226952595573	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTTCCTCTCCTTCCTC	8	True	NA	11	True	ATTAAA	-13	NA	50312337	50322892	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_+_50312390_50314590_50314627_50321482_50321595_50322510
H1_mix_00026993	chr14	+	570	3	FSM	ENSG00000198513.14	ENST00000557735.1	570	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	19.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATCAATAAACCTGATGG	59	False	NA	NA	False	NA	NA	NA	50560286	50591048	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_50560501_50587830_50588079_50590940
H1_mix_00027001	chr14	+	6875	3	NIC	ENSG00000180008.9	novel	6903	3	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	37.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAAGGCTTTGTGTTTTA	-17	True	NA	11	True	ATTAAA	-16	NA	55027231	55049483	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_55027472_55031888_55031992_55042951
H1_mix_00027003	chr14	+	2511	5	NNC	ENSG00000168175.15	novel	2836	5	NA	NA	5	19122	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	412.769533153793	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCGGATATGATGGCACAC	-21	True	NA	NA	False	AATACA	-28	NA	55051651	55089316	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_55051804_55061679_55061702_55062617_55063326_55064615_55066217_55089288
H1_mix_00027005	chr14	+	4267	17	NNC	ENSG00000070269.14	novel	4259	16	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	2	6	junction_11	21.3508635656734	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGTCTTTATTGGTTCA	61	False	NA	32	True	AATAAA	-22	NA	56579883	56649515	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_56580075_56585000_56585033_56585760_56585913_56603814_56603993_56605569_56605684_56609105_56609286_56612244_56612286_56615943_56616028_56617182_56617298_56618593_56618764_56619357_56619452_56621530_56621703_56625381_56625531_56632994_56633172_56634898_56634953_56636507_56636599_56647242
H1_mix_00027006	chr14	+	1815	9	FSM	ENSG00000053770.12	ENST00000431972.6	1815	9	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	111.034622978601	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAATCATAATCTTAT	-7	True	NA	NA	False	TTTAAA	-26	NA	57269055	57288925	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_57269389_57273708_57273751_57274243_57274890_57280194_57280423_57282088_57282229_57282933_57283020_57283111_57283231_57286222_57286320_57288801
H1_mix_00027022	chr14	+	4076	19	NIC	ENSG00000054654.20	novel	21822	116	NA	NA	-10400	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_1	21.6036833850728	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTTGTACTGAATTCT	1	True	NA	15	True	ATTAAA	-18	NA	64186353	64226433	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_64186580_64188549_64188709_64190070_64190238_64202800_64202964_64208757_64208946_64209427_64209579_64209941_64210125_64211960_64212099_64212810_64213006_64214193_64214471_64216247_64216388_64218397_64218513_64219207_64219411_64220436_64220638_64221575_64221705_64223188_64223381_64224460_64224548_64224998_64225046_64225318
H1_mix_00027031	chr14	+	3294	10	NNC	ENSG00000081177.19	novel	2688	10	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	54.275019832127	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGCTCACTGGATGTAAA	-25	True	NA	26	True	AATAAA	-15	NA	69191779	69242355	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_69191822_69203916_69204001_69209423_69209804_69228815_69229073_69230471_69230599_69234699_69235032_69236045_69236153_69236406_69236543_69237574_69237932_69240883
H1_mix_00027035	chr14	+	2397	12	FSM	ENSG00000198732.11	ENST00000361956.8	3679	12	1	1281	1	-1281	multi-exon	FALSE	canonical	0	0	junction_1	0.98752549920002	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGGATTTGCATTACGTC	1	True	NA	NA	False	NA	NA	NA	69879416	70031085	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_69879778_69952137_69952304_69953419_69953533_69975714_69975815_69977917_69977966_69992416_69992474_69994399_69994481_70010753_70010947_70011484_70011568_70013385_70013492_70023202_70023448_70030241
H1_mix_00027038	chr14	+	868	6	NNC	ENSG00000100731.16	novel	12865	36	NA	NA	111	390	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	23.9131762842162	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTGTGGATTTTATTTTT	7396	False	NA	NA	False	NA	NA	NA	70978488	71013228	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_70978649_70988569_70988700_70995740_70995926_71009633_71009725_71011491_71011550_71012984
H1_mix_00027041	chr14	+	8531	23	ISM	ENSG00000197555.10	ENST00000381232.8	7952	24	39	0	0	0	3prime_fragment	FALSE	canonical	3	157	junction_21	35.6557229419401	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTCGATAGAGAATTACT	8	False	NA	13	True	AATAAA	-18	NA	71320514	71741209	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_+_71321182_71512742_71512846_71529311_71529371_71587570_71589371_71618756_71618888_71624047_71624237_71650334_71650510_71658332_71658437_71661309_71661468_71671118_71671693_71672347_71672623_71685361_71685632_71698980_71699128_71702380_71702506_71705221_71705341_71709221_71709665_71723646_71723887_71724669_71724836_71730054_71730302_71733665_71733813_71735276_71735392_71738240_71738326_71739017
H1_mix_00027043	chr14	+	1823	4	FSM	ENSG00000197555.10	ENST00000557712.1	1823	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	115.034294403403	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAATATGAAGCATTTCAT	6	True	NA	NA	False	AATAAA	-15	NA	71467184	71575086	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_71467248_71512742_71512846_71529311_71529371_71573488
H1_mix_00027057	chr14	+	4424	4	FSM	ENSG00000119596.18	ENST00000554107.2	4424	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	127.0441742947	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGAGTGAACGGTCAA	NA	False	NA	NA	False	AATAAA	-19	NA	74817237	74859435	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_74817278_74818230_74818315_74821056_74821138_74855216
H1_mix_00027066	chr14	+	2455	8	NIC	ENSG00000119686.10	novel	669	7	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	10.8213696368032	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTCTGCCTTATCATTCA	4417	False	NA	6	True	AATAAA	-14	NA	75631694	75648167	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_75631826_75633628_75633697_75634909_75635014_75639351_75639463_75640954_75641061_75641181_75641294_75641842_75641899_75646400
H1_mix_00027070	chr14	+	4640	32	NNC	ENSG00000119685.20	novel	4716	32	NA	NA	49	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_17	31.8041941225952	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTTTTTTTCCCTTTA	81	False	NA	4	True	AATAAA	-16	NA	75661326	75955079	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_75661388_75663054_75663224_75669415_75669523_75681544_75681628_75683549_75683657_75690191_75690323_75699187_75699271_75707017_75707088_75707622_75707708_75717860_75717963_75719734_75719827_75720595_75720704_75732337_75732420_75733988_75734051_75735194_75735290_75745094_75745209_75745489_75745587_75752892_75752956_75764614_75764773_75766061_75766369_75771733_75771855_75775483_75775631_75776746_75776851_75779574_75779703_75782486_75782574_75783146_75783531_75792915_75793101_75820006_75820162_75863666_75863863_75882684_75882903_75902141_75902225_75954423
H1_mix_00027075	chr14	+	1760	9	NNC	ENSG00000089916.18	novel	14021	10	NA	NA	22	-1644	intron_retention	FALSE	canonical	3	19	junction_8	56.3138526474614	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCTAGGGTAGTGCTT	1828	False	NA	6	True	AATAAA	-14	NA	76154375	76200363	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_76155026_76166662_76166728_76171842_76172020_76173545_76173626_76176622_76176691_76177987_76178043_76180763_76180850_76195877_76195973_76199879
H1_mix_00027076	chr14	+	466	4	FSM	ENSG00000071246.11	ENST00000553518.1	484	4	10	8	10	-8	multi-exon	FALSE	canonical	0	0	junction_3	12.4988888395018	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAACAACATCATGAACTC	1283	False	NA	NA	False	ATTAAA	-25	NA	76769962	76773905	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_76770052_76771189_76771247_76773136_76773212_76773660
H1_mix_00027082	chr14	+	407	3	FSM	ENSG00000119705.10	ENST00000556956.1	450	3	43	0	43	0	multi-exon	FALSE	canonical	3	13033	junction_2	435.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATAACTGAGAATTTTGT	2592	False	NA	16	True	AATAAA	-4	NA	77710686	77717584	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_77710897_77715771_77715880_77717495
H1_mix_00027084	chr14	+	2055	13	NNC	ENSG00000042317.17	novel	1410	13	NA	NA	3	0	intron_retention	FALSE	non_canonical	0	0	junction_8	28.6825295258281	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAATATTACTTTTCTT	-18	True	NA	8	True	AATAAA	-18	NA	88385659	88438453	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_88385838_88391380_88391456_88393392_88393489_88396155_88396204_88415204_88415267_88416710_88416845_88426231_88426705_88427629_88427700_88429347_88429464_88431171_88431226_88433134_88433213_88437542_88437598_88437837
H1_mix_00027086	chr14	+	2724	3	FSM	ENSG00000100722.20	ENST00000557491.1	2724	3	0	0	0	0	multi-exon	FALSE	canonical	3	875	junction_2	13.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTTCA	5540	False	NA	71	True	AATAAA	-35	NA	88608421	88612979	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_88609804_88610833_88610941_88611744
H1_mix_00027088	chr14	+	2764	16	ISM	ENSG00000042088.14	ENST00000335725.9	3722	17	110	1455	0	0	3prime_fragment	FALSE	canonical	3	203	junction_1	70.9610221647537	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAACATTCCTAATAAAGTA	88	False	NA	-25	True	NA	NA	NA	89956036	90043309	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_+_89956801_89963107_89963674_89966146_89966191_89967366_89967423_89971174_89971272_89975780_89975816_89980539_89980633_89984515_89984684_89985131_89985211_89988904_89989091_89989716_89989766_89991916_89991984_89993375_89993484_90019315_90019419_90033105_90033215_90043069
H1_mix_00027096	chr14	+	2789	12	NIC	ENSG00000066455.13	novel	2879	13	NA	NA	26	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_11	66.9586032220994	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCTTTTCTAAAATAAT	-6	True	NA	NA	False	AATAAA	-14	NA	92794330	92839947	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_92794457_92797407_92797982_92806735_92806964_92809299_92809520_92810253_92810378_92811550_92811755_92816250_92816422_92819707_92819837_92824545_92824645_92833121_92833348_92835558_92835665_92839365
H1_mix_00027100	chr14	+	715	5	NIC	ENSG00000165948.11	novel	804	6	NA	NA	-6	-2	combination_of_known_junctions	FALSE	canonical	3	19	junction_4	50.6624861213897	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCCTAGTGTCGGTTCTC	17	False	NA	16	True	AATAAA	-14	NA	94081322	94102706	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_94081450_94096886_94096966_94100738_94100772_94101813_94102060_94102476
H1_mix_00027106	chr14	+	698	3	FSM	ENSG00000140057.9	ENST00000554706.1	715	3	17	0	17	0	multi-exon	FALSE	canonical	2	3	junction_2	6.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTGACTTGTCTTTTTTT	4537	False	NA	NA	False	AATACA	-28	NA	96482998	96488275	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_96483220_96486897_96487057_96487957
H1_mix_00027108	chr14	+	1215	10	FSM	ENSG00000100749.9	ENST00000679736.1	1202	10	-17	4	0	-4	multi-exon	FALSE	canonical	2	9	junction_8	289.800101389617	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATGTTTAGTAGCAAGTT	-16	True	NA	NA	False	AATAAA	-14	NA	96797367	96860918	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856527_96856587_96860556
H1_mix_00027113	chr14	+	2111	7	NNC	ENSG00000176473.14	novel	2123	7	NA	NA	70	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	40.5191998385402	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTGCATTAGCAGCTT	32	False	NA	32	True	AATAAA	-36	NA	100376610	100530303	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_+_100376810_100380909_100381747_100468020_100468169_100483993_100484125_100525869_100526041_100529067_100529209_100529819
H1_mix_00027122	chr14	+	2378	3	FSM	ENSG00000140153.18	ENST00000556807.1	2382	3	4	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	13	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCGCTTGTTTATCTTCTG	-3	True	NA	NA	False	ATTAAA	-14	NA	102139896	102223671	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_102140173_102208602_102209863_102222829
H1_mix_00027123	chr14	+	2338	4	NIC	ENSG00000140153.18	novel	2616	4	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	38.2738669184195	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTGAATATACCGCTTG	24	False	NA	NA	False	ATTAAA	-3	NA	102139923	102223660	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_102139988_102194937_102195121_102208602_102209863_102222829
H1_mix_00027134	chr14	+	2610	15	NIC	ENSG00000126214.22	novel	2322	14	NA	NA	0	5	combination_of_known_junctions	FALSE	canonical	2	42	junction_12	124.712158384736	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACTCACTCCGACTGA	-11	True	NA	1	True	NA	NA	NA	103629202	103686205	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679308_103679519_103684985_103685037_103685637
H1_mix_00027135	chr14	+	2298	16	FSM	ENSG00000126214.22	ENST00000246489.11	2294	16	-4	0	0	0	multi-exon	FALSE	canonical	2	39	junction_13	130.619991663689	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAACCTTGGAGGTGCCTT	23	True	NA	NA	False	NA	NA	NA	103629236	103693743	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679546_103687080_103687212_103692358_103692426_103693552
H1_mix_00027151	chr14	-	741	1	Intergenic	novelGene_417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTGCACTCCAGCCTG	7464	False	NA	NA	False	NA	NA	NA	20310417	20309676	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_-_20309700_20310400
H1_mix_00027152	chr14	-	1446	6	ISM	ENSG00000100814.18	ENST00000398160.6	1613	7	3637	0	0	0	3prime_fragment	FALSE	canonical	3	393	junction_3	68.3900577569576	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTTCTATGTTCATCT	3938	False	NA	-10	True	AATAAA	-22	NA	20329373	20311367	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_-_20311753_20313467_20313802_20316226_20316561_20325538_20325654_20326715_20326794_20329173
H1_mix_00027154	chr14	-	392	4	FSM	ENSG00000100814.18	ENST00000553291.5	392	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	205.825708360793	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGACATGCTGCTTTGTAA	3938	False	NA	NA	False	NA	NA	NA	20329373	20316511	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_20316561_20325538_20325654_20326715_20326794_20329223
H1_mix_00027155	chr14	-	670	1	FSM	ENSG00000259001.3	ENST00000554988.1	638	1	-49	17	-49	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20343734	20343064	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_20343100_20343700
H1_mix_00027156	chr14	-	2025	1	NIC	ENSG00000129566.13	novel	2967	9	NA	NA	5389	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTGCTTTTTAATTT	NA	False	NA	-5	True	AATAAA	-15	NA	20367691	20365666	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_20365700_20367700
H1_mix_00027157	chr14	-	602	5	FSM	ENSG00000129566.13	ENST00000553984.1	602	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	5.88960949469487	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGACACGGCAGCGTAGA	NA	False	NA	NA	False	NA	NA	NA	20373080	20369366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_20369577_20369673_20369780_20371217_20371315_20371488_20371608_20373010
H1_mix_00027158	chr14	-	2856	7	FSM	ENSG00000092094.11	ENST00000555656.5	3258	7	0	402	0	250	multi-exon	TRUE	canonical	3	9	junction_6	86.8896170756642	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCGGGTCCCGTGCTAACT	5118	False	NA	NA	False	NA	NA	NA	20450879	20446812	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_20447280_20447421_20447521_20447614_20447691_20447903_20447995_20448105_20448172_20448732_20448812_20448901
H1_mix_00027161	chr14	-	784	4	FSM	ENSG00000258451.1	ENST00000554286.1	915	4	131	0	131	0	multi-exon	FALSE	canonical	2	4	junction_2	0.942809041582063	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTTGCTCTCTGACACG	NA	False	NA	NA	False	NA	NA	NA	20706989	20693479	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_20693750_20699035_20699130_20699321_20699499_20706746
H1_mix_00027162	chr14	-	1713	12	ISM	ENSG00000165795.25	ENST00000554104.5	2146	13	651	-9	13	0	3prime_fragment	FALSE	canonical	3	177	junction_4	18.9557989557177	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTTTGTCTAGGTGTG	3574	False	NA	-2	True	AATAAA	-26	NA	21022169	21016762	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061
H1_mix_00027166	chr14	-	2086	1	FSM	ENSG00000165804.16	ENST00000624093.1	2513	1	505	-78	-132	78	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGGTCTTGCCTTGTTTA	926	False	NA	NA	False	NA	NA	NA	21103711	21101625	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21101600_21103700
H1_mix_00027167	chr14	-	1027	5	FSM	ENSG00000092201.10	ENST00000556217.5	1027	5	0	0	0	0	multi-exon	FALSE	canonical	3	1889	junction_3	101.785313282418	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTCAAATCATAGTGTC	-2	True	NA	NA	False	CATAAA	-33	NA	21384010	21369435	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21369897_21370335_21370489_21371873_21372045_21373337_21373431_21383861
H1_mix_00027168	chr14	-	8514	39	NIC	ENSG00000100888.15	novel	8259	39	NA	NA	6	0	intron_retention	FALSE	canonical	1	4	junction_15	28.3854552900277	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTCCTTTGTTCTATGTT	10	True	NA	-25	True	AATAAA	-21	NA	21437238	21385193	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_21386177_21390946_21391064_21391462_21391643_21391832_21391947_21392506_21392810_21393105_21393255_21393475_21394196_21394276_21394486_21394911_21395120_21395297_21395353_21395816_21395893_21397822_21397953_21399601_21399706_21399980_21400071_21400150_21400332_21400412_21400613_21400874_21401072_21401402_21401514_21401956_21402137_21402335_21402504_21403016_21403213_21403452_21403664_21405208_21405465_21405720_21405865_21406855_21407033_21408311_21408556_21408703_21408826_21409850_21409989_21412912_21412997_21414300_21414419_21414937_21414994_21415573_21415643_21415724_21415908_21426127_21426243_21427868_21428255_21428963_21429336_21430800_21431859_21436900_21436966_21437193
H1_mix_00027171	chr14	-	2286	9	NNC	ENSG00000129472.15	novel	2914	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.0950115932383	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATACTCCATGTGTCATT	-1	True	NA	-5	True	ATTAAA	-22	NA	21476936	21459019	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_21460347_21460951_21461304_21462349_21462419_21463655_21463768_21468356_21468450_21468669_21468753_21474866_21474935_21476527_21476600_21476826
H1_mix_00027172	chr14	-	2507	5	FSM	ENSG00000165819.12	ENST00000396522.6	2523	5	29	-13	29	0	multi-exon	FALSE	canonical	3	18	junction_3	205.58012428248	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCCATTCTGGCTCTGCT	6418	False	NA	-20	True	AATAAA	-26	NA	21504913	21498132	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21498370_21499024_21499601_21499763_21499803_21503172_21503578_21503663
H1_mix_00027174	chr14	-	545	2	FSM	ENSG00000165819.12	ENST00000545788.1	545	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGTGGCACTGGGTGTT	-11	True	NA	NA	False	AATGAA	-36	NA	21511342	21510654	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_21510981_21511123
H1_mix_00027175	chr14	-	652	4	NNC	ENSG00000129562.11	novel	684	3	NA	NA	0	16265	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	845.591443244839	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATTAGGTGTCCCTCCC	40	True	NA	NA	False	AAAAAG	-5	NA	22589157	22548641	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_22548677_22564906_22565138_22575058_22575234_22588946
H1_mix_00027176	chr14	-	442	2	FSM	ENSG00000129562.11	ENST00000538631.1	441	2	0	-1	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATATGCCTCTGGCTCTGTT	40	True	NA	-12	True	ATTAAA	-20	NA	22589157	22564906	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22565138_22588946
H1_mix_00027177	chr14	-	2201	11	FSM	ENSG00000155465.20	ENST00000285850.11	2263	11	63	-1	-12	1	multi-exon	FALSE	canonical	1	2	junction_10	9.36429388688757	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTGGCTTCATTTTAT	3671	False	NA	-2	True	AATAAA	-18	NA	22819733	22773220	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22773717_22773932_22774117_22774353_22774504_22775443_22775541_22775832_22775937_22776194_22776319_22778792_22778938_22779925_22780052_22812899_22813441_22815313_22815452_22819637
H1_mix_00027180	chr14	-	1448	9	FSM	ENSG00000092036.19	ENST00000490506.5	1447	9	0	-1	0	1	multi-exon	FALSE	canonical	3	13	junction_7	88.8874815426784	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTAGTCATTTTCCTTG	-10	True	NA	-23	True	AATAAA	-21	NA	22957094	22946226	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22951554_22951690_22952327_22952460_22955099_22955177_22956915
H1_mix_00027182	chr14	-	521	1	FSM	ENSG00000280129.1	ENST00000623843.1	1625	1	967	137	967	-137	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGGCAACGCATCCCAAG	3983	False	NA	NA	False	NA	NA	NA	23006156	23005635	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23005600_23006200
H1_mix_00027183	chr14	-	729	2	FSM	ENSG00000100804.19	ENST00000460922.2	729	2	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCAGCCTGTGTTGCAT	-1	True	NA	-7	True	NA	NA	NA	23034894	23025857	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23026376_23034683
H1_mix_00027184	chr14	-	898	3	FSM	ENSG00000100804.19	ENST00000425762.2	900	3	2	0	2	0	multi-exon	FALSE	canonical	3	41	junction_2	1717.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTACTTTCTTGGATG	3	True	NA	-15	True	NA	NA	NA	23035228	23025901	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_23026376_23033367_23033675_23035111
H1_mix_00027185	chr14	-	2405	12	NIC	ENSG00000100813.15	novel	2445	12	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	100	junction_11	167.092145608245	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGCTTTCTTT	17	True	NA	-3	True	AATAAA	-20	NA	23071554	23058563	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064222_23064354_23064489_23065965_23066009_23069475_23069618_23071426
H1_mix_00027186	chr14	-	4796	10	ISM	ENSG00000100813.15	ENST00000557515.5	2751	12	2082	847	42	-352	intron_retention	FALSE	canonical	3	133	junction_9	133.55814380927	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAGAAGAAGAGCAAAAG	2146	False	NA	NA	False	NA	NA	NA	23069483	23059410	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064258_23064354_23064486_23065965
H1_mix_00027190	chr14	-	6067	6	ISM	ENSG00000136367.15	ENST00000419474.5	9296	10	21579	-51	-8338	51	3prime_fragment	FALSE	canonical	3	8	junction_5	9.89141041510259	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCCCCCCGGTTTAAGGG	417	False	NA	52	True	NA	NA	NA	23530186	23520805	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_-_23522942_23523202_23526680_23526846_23526974_23527603_23527805_23529709_23529769_23530119
H1_mix_00027191	chr14	-	7047	27	Fusion	ENSG00000092051.18_ENSG00000213983.12	novel	2598	22	NA	NA	-60	0	multi-exon	FALSE	canonical	3	143	junction_26	104.750167699799	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGAACCTACACCTGAGGG	5462	False	23578879	NA	False	NA	NA	NA	23578850	23559688	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr14_-_23559851_23559937_23560037_23560254_23560419_23561295_23561432_23561511_23561636_23561961_23562067_23562287_23562416_23562503_23562594_23563379_23563503_23563583_23563639_23563715_23563857_23564045_23564160_23564332_23564389_23564561_23564661_23565118_23565200_23565605_23565702_23565815_23565893_23566063_23566161_23566277_23566420_23566561_23566687_23567110_23567320_23567738_23569718_23570927_23571461_23571801_23571921_23575684_23576457_23577074_23577625_23578179
H1_mix_00027192	chr14	-	2101	20	NIC	ENSG00000213983.12	novel	3298	21	NA	NA	0	-137	combination_of_known_splicesites	FALSE	canonical	3	29	junction_5	153.914499415078	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCTACGACCACTTTCAC	5	True	NA	NA	False	NA	NA	NA	23567499	23559825	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_23559851_23559937_23560037_23560254_23560419_23561295_23561432_23561511_23561636_23562287_23562416_23562503_23562594_23563379_23563503_23563583_23563639_23563715_23563857_23564045_23564160_23564332_23564389_23564561_23564661_23565118_23565200_23565605_23565702_23565815_23565893_23566063_23566161_23566277_23566420_23567110_23567316_23567450
H1_mix_00027195	chr14	-	565	1	FSM	ENSG00000100908.14	ENST00000558045.2	565	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTATAACTATATTTATT	7759	False	NA	-7	True	AATAAA	-21	NA	24139523	24138958	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24139000_24139500
H1_mix_00027196	chr14	-	496	2	FSM	ENSG00000100911.16	ENST00000559005.2	496	2	0	0	0	0	multi-exon	FALSE	canonical	3	1789	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGGCGTGTGTCATTC	3330	False	NA	-5	True	AATAAA	-24	NA	24143952	24143361	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24143490_24143584
H1_mix_00027197	chr14	-	2107	6	FSM	ENSG00000100926.15	ENST00000529332.5	2107	6	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_2	109.642327592951	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTTTTTACAATTACC	-6	True	NA	-52	True	NA	NA	NA	24195453	24189191	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24189809_24190379_24190592_24192170_24192357_24192647_24193270_24194674_24195037_24195345
H1_mix_00027198	chr14	-	699	5	NNC	ENSG00000129559.13	novel	626	4	NA	NA	0	16333	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2084.30533991544	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTTGTGTGGTGGGTAT	10010	False	NA	NA	False	AAAACA	-5	NA	24232331	24200523	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_24200570_24216857_24217224_24218058_24218216_24218383_24218432_24232249
H1_mix_00027199	chr14	-	2533	1	FSM	ENSG00000278784.1	ENST00000619226.1	1200	1	-1333	0	-1333	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGTATTTCTT	9883	False	NA	NA	False	ATTAAA	-20	NA	24204144	24201611	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24201600_24204100
H1_mix_00027201	chr14	-	1884	7	NIC	ENSG00000092330.18	novel	1801	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	60	junction_1	53.7121960079831	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTAAAATGCTCTCTGTA	-1	True	NA	-24	True	NA	NA	NA	24242663	24239794	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_24239932_24240063_24240876_24241019_24241117_24241203_24241312_24241674_24241777_24241889_24241995_24242140
H1_mix_00027204	chr14	-	1917	17	NIC	ENSG00000100949.15	novel	1946	17	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	5	junction_15	29.0768781637575	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTGTCGCTGCTATCACT	45	True	NA	0	True	AATAAA	-30	NA	24271516	24265536	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_24265764_24266429_24266518_24266775_24266890_24267659_24267777_24267869_24267959_24268109_24268199_24268368_24268421_24268513_24268620_24268724_24268827_24268910_24268994_24269079_24269164_24269490_24269695_24269952_24270141_24270333_24270459_24270836_24270999_24271112_24271170_24271486
H1_mix_00027206	chr14	-	696	3	FSM	ENSG00000139899.11	ENST00000555436.1	718	3	22	0	22	0	multi-exon	TRUE	canonical	1	2	junction_2	2	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTCCACCCACCCACCC	NA	False	NA	NA	False	NA	NA	NA	24430932	24427604	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24427987_24428285_24428406_24430738
H1_mix_00027207	chr14	-	1217	6	NIC	ENSG00000100445.18	novel	1206	6	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_5	142.381740402342	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCTCATCTCTTTGGC	NA	False	NA	-13	True	AATAAA	-19	NA	24442851	24439765	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_24440493_24440782_24440927_24441673_24441796_24442177_24442261_24442345_24442453_24442817
H1_mix_00027209	chr14	-	4318	7	FSM	ENSG00000168952.16	ENST00000396700.5	4021	7	-95	-202	-12	0	multi-exon	FALSE	canonical	2	4	junction_5	83.7491293487083	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGACAATGGGCATCTAT	-17	True	NA	NA	False	AATAAA	-21	NA	25050159	24809453	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24812733_24819036_24819195_24855935_24856102_24857026_24857158_24974664_24974851_25010524_25010641_25049877
H1_mix_00027210	chr14	-	4081	7	NIC	ENSG00000168952.16	novel	4021	7	NA	NA	-11	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	83.796877427901	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAAATTTGTTTCTTGCA	-16	True	NA	-11	True	ATTAAA	-15	NA	25050158	24809660	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_24812733_24819036_24819195_24855935_24856102_24857026_24857158_24974664_24974851_24987885_24987973_25049877
H1_mix_00027211	chr14	-	1970	6	FSM	ENSG00000168952.16	ENST00000419632.6	1970	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	73.4084463805086	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAATCGCAGATAGAAAT	253	False	NA	NA	False	NA	NA	NA	25049889	24812086	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_24812733_24819036_24819195_24855935_24856102_24857026_24857158_24974664_24974851_25049206
H1_mix_00027212	chr14	-	527	1	FSM	ENSG00000257179.1	ENST00000551091.1	273	1	-78	-176	-78	176	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAAGTCTCCAAAGCTGG	26	False	NA	NA	False	NA	NA	NA	25267414	25266887	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_25266900_25267400
H1_mix_00027213	chr14	-	569	3	FSM	ENSG00000258932.5	ENST00000554904.5	569	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTCATTATATTTTACA	NA	False	NA	NA	False	TTTAAA	-18	NA	27673221	27321825	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_27322142_27656442_27656503_27673028
H1_mix_00027216	chr14	-	8719	43	NIC	ENSG00000092148.14	novel	9080	43	NA	NA	31	5	combination_of_known_junctions	FALSE	canonical	3	55	junction_16	59.8980094990653	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCATGTGACTATTTC	716	False	NA	2	True	ATTAAA	-20	NA	31207443	31100111	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_31101068_31101179_31101325_31102915_31103067_31105382_31105477_31105589_31105669_31106645_31107254_31107566_31107705_31109396_31109599_31112415_31112544_31113103_31113190_31113276_31113485_31113876_31114060_31114285_31114341_31116235_31116459_31119709_31119867_31121382_31121506_31122919_31123048_31127784_31128007_31128611_31129449_31133237_31133415_31133508_31133676_31134871_31135196_31135475_31135616_31136530_31136666_31139891_31139998_31141857_31141953_31144110_31144258_31144806_31144942_31148720_31148798_31148896_31149161_31149998_31150222_31156839_31157011_31157164_31157304_31168297_31168473_31169353_31169469_31171860_31171960_31172045_31172123_31173155_31173427_31173524_31173807_31174910_31175139_31178019_31178255_31205796_31205958_31207390
H1_mix_00027218	chr14	-	7789	36	NNC	ENSG00000129493.15	novel	7811	36	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_35	20.6645906352497	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGTATTTTTAAATTAT	50	False	NA	-2	True	AATAAA	-18	NA	31420531	31291787	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_31293613_31293890_31294105_31295908_31296064_31302294_31302520_31304904_31305178_31306731_31306880_31307892_31308021_31308933_31309183_31312967_31313191_31315769_31315950_31318223_31318293_31321498_31321681_31323564_31323805_31326162_31326343_31337475_31337615_31343895_31344066_31345086_31345277_31347747_31347908_31349788_31349980_31350611_31350718_31358636_31358813_31358893_31359058_31364188_31364299_31371809_31371910_31374815_31374969_31380466_31380579_31383520_31383772_31386419_31386576_31387119_31387376_31388844_31389003_31394051_31394227_31395198_31395349_31398672_31398782_31400300_31400513_31402849_31403050_31420471
H1_mix_00027219	chr14	-	7744	36	NIC	ENSG00000129493.15	novel	7811	36	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_35	20.8353310606806	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGTATTTTTAAATTAT	50	False	NA	-2	True	AATAAA	-18	NA	31420531	31291787	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_31293613_31293890_31294105_31295908_31296064_31302294_31302520_31304904_31305178_31306731_31306880_31307892_31308021_31308933_31309183_31312967_31313191_31315769_31315950_31318223_31318293_31321498_31321681_31323564_31323805_31326162_31326343_31337475_31337615_31343895_31344066_31345086_31345277_31347747_31347908_31349788_31349980_31350611_31350718_31358636_31358813_31358893_31359058_31364188_31364299_31371809_31371910_31374815_31374969_31380466_31380579_31383520_31383772_31386419_31386528_31387119_31387376_31388844_31389006_31394051_31394227_31395198_31395349_31398672_31398782_31400300_31400513_31402849_31403050_31420471
H1_mix_00027221	chr14	-	1360	1	FSM	ENSG00000286527.1	ENST00000670017.1	1304	1	-58	2	-58	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTTCTAACGCCCTGT	NA	False	NA	NA	False	AATAAA	-14	NA	32201794	32200434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_32200400_32201800
H1_mix_00027222	chr14	-	1293	1	FSM	ENSG00000259086.3	ENST00000556746.2	445	1	-3	-845	-3	845	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGTCAGGTTTCTCTTATA	NA	False	NA	NA	False	AATAAA	-20	NA	32272304	32271011	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_32271000_32272300
H1_mix_00027223	chr14	-	1093	1	FSM	ENSG00000206588.1	ENST00000383861.1	164	1	29	-958	29	958	mono-exon	FALSE	NA	NA	NA	NA	NA	744	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAGACTCCGTCTCAAAA	NA	False	NA	NA	False	NA	NA	NA	34556360	34555267	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_34555300_34556400
H1_mix_00027224	chr14	-	2596	17	ISM	ENSG00000198604.11	ENST00000360310.6	5729	27	3	27373	3	12	5prime_fragment	FALSE	canonical	1	38	junction_6	15.4342101757751	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTGATTGCTTTCATTT	0	True	NA	-28	True	AATAAA	-29	NA	34875357	34780103	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr14_-_34780311_34783118_34783233_34783761_34783928_34785776_34786002_34786125_34786222_34792774_34792922_34794748_34794888_34795669_34795766_34800223_34800391_34801093_34801194_34802853_34802989_34807450_34807539_34810934_34811037_34826012_34826157_34862043_34862323_34874491_34874663_34875137
H1_mix_00027225	chr14	-	863	4	FSM	ENSG00000258704.7	ENST00000691849.1	549	4	52	-366	0	166	multi-exon	FALSE	canonical	3	7	junction_3	20.237478982214	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTTTTCTATTTTTCCC	-14	True	NA	NA	False	NA	NA	NA	34982532	34963541	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_34964041_34969169_34969308_34971941_34972065_34982429
H1_mix_00027227	chr14	-	462	1	FSM	ENSG00000256243.2	ENST00000541658.2	472	1	-1	11	-1	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACTAAACTGAGTTAAATG	NA	False	NA	NA	False	NA	NA	NA	35235652	35235190	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_35235200_35235700
H1_mix_00027229	chr14	-	237	1	FSM	ENSG00000207046.1	ENST00000384319.1	105	1	59	-191	59	191	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTAGAGAAATGCAAATCAA	NA	False	NA	NA	False	AAAAAG	-17	NA	37434514	37434277	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_37434300_37434500
H1_mix_00027230	chr14	-	3223	6	Fusion	ENSG00000259048.1_ENSG00000258696.1	novel	494	2	NA	NA	1074	1	intron_retention	FALSE	canonical	2	5	junction_1	3.49857113690718	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGGAAATAGTTCTGTC	NA	False	NA	1	True	AATAAA	-16	NA	38193207	38003111	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr14_-_38003369_38030126_38030270_38030487_38030592_38036802_38039431_38168339_38168400_38193176
H1_mix_00027234	chr14	-	6728	5	NIC	ENSG00000179454.14	novel	6522	5	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	10.3319891598859	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTACTTTGTATATGTCAT	21	True	NA	-25	True	AATAAA	-9	NA	44961909	44924328	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_44929192_44931332_44931542_44934114_44934559_44945029_44945929_44961596
H1_mix_00027237	chr14	-	787	3	NNC	ENSG00000289195.1	novel	923	3	NA	NA	-7189	6	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	337	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTATGTCTGATGATTAAA	NA	False	NA	0	True	AATAAA	-25	NA	48267832	48233736	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_48234227_48235430_48235619_48267723
H1_mix_00027239	chr14	-	5085	7	Fusion	ENSG00000287492.1_ENSG00000289195.1	novel	923	3	NA	NA	-2340	6	multi-exon	FALSE	canonical	2	4	junction_5	226.729403082666	75	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTATGTCTGATGATTAAA	NA	False	NA	0	True	AATAAA	-25	NA	48267949	48233736	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr14_-_48234227_48235430_48235619_48258584_48260263_48260392_48262484_48265560_48265755_48266239_48266458_48267723
H1_mix_00027240	chr14	-	1308	5	Fusion	ENSG00000287492.1_ENSG00000289195.1	novel	923	3	NA	NA	-2348	6	multi-exon	FALSE	canonical	3	10	junction_2	258.024708119203	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTATGTCTGATGATTAAA	NA	False	NA	0	True	AATAAA	-25	NA	48267957	48233736	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr14_-_48234227_48235430_48235619_48262281_48262484_48265560_48265755_48267723
H1_mix_00027241	chr14	-	3675	6	Fusion	ENSG00000287492.1_ENSG00000289195.1	novel	923	3	NA	NA	-2378	6	multi-exon	FALSE	canonical	3	104	junction_2	220.930396279009	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTATGTCTGATGATTAAA	NA	False	NA	0	True	AATAAA	-25	NA	48267987	48233736	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr14_-_48234227_48235430_48235619_48258565_48259014_48260392_48262484_48265560_48265755_48267723
H1_mix_00027245	chr14	-	663	2	NNC	ENSG00000282885.2	novel	1486	2	NA	NA	-2282	-947	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCCCCTCCCTCATTAA	1552	False	NA	0	True	NA	NA	NA	49866608	49862549	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_49862848_49866243
H1_mix_00027247	chr14	-	2275	6	FSM	ENSG00000100485.12	ENST00000555794.2	2278	6	0	3	0	-3	multi-exon	FALSE	canonical	3	32	junction_3	4.83321838943783	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGCTGTGATGCATTTGT	8675	False	NA	NA	False	AATAAA	-17	NA	50180654	50155894	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_50157122_50158564_50158647_50159430_50160087_50161481_50161610_50174453_50174553_50180571
H1_mix_00027313	chr14	-	1248	10	FSM	ENSG00000054983.17	ENST00000622264.4	1221	10	-16	-11	0	11	multi-exon	FALSE	canonical	3	130	junction_4	16.6733320005331	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACATGTAAATACATAAGCA	10	True	NA	5	True	AATAAA	-25	NA	87993170	87963302	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_87963512_87965504_87965630_87968334_87968491_87976357_87976489_87982204_87982244_87984393_87984534_87986488_87986603_87988143_87988208_87988454_87988524_87992969
H1_mix_00027316	chr14	-	7955	8	NIC	ENSG00000053254.16	novel	7832	7	NA	NA	0	13	combination_of_known_junctions	FALSE	canonical	3	43	junction_2	65.4248283395937	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGCGCCTCCCTGTGCA	26	True	NA	10	True	AAGAAA	-21	NA	89619137	89156158	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_89162970_89180700_89180807_89190383_89190450_89280949_89281015_89350671_89350809_89411933_89412491_89486568_89486672_89619027
H1_mix_00027317	chr14	-	1621	5	Fusion	ENSG00000053254.16_ENSG00000259053.1	novel	450	4	NA	NA	30	-15754	multi-exon	FALSE	canonical	2	4	junction_1	75.2906866750463	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACAGAAATTTATTTCTC	1	True	NA	-2	True	AATAAA	-26	NA	89417203	89206135	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr14_-_89206665_89280949_89281015_89350671_89350809_89411933_89412491_89416870
H1_mix_00027319	chr14	-	1868	6	FSM	ENSG00000140025.16	ENST00000538485.6	1870	6	2	0	2	0	multi-exon	FALSE	canonical	1	1	junction_1	69.7613073271997	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTGAATAAAACTGTACT	-14	True	NA	NA	False	NA	NA	NA	89954748	89923307	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr14_-_89924678_89931540_89931632_89932525_89932628_89950096_89950143_89953905_89954002_89954585
H1_mix_00027331	chr14	-	10246	27	NIC	ENSG00000100697.15	novel	10384	27	NA	NA	-6	17	intron_retention	FALSE	canonical	3	13	junction_26	27.3442063571385	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTCAATTCAAGTGGGT	-10	True	NA	12	True	AATAAA	-33	NA	95157535	95086210	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_95090664_95091033_95091110_95091202_95091366_95093887_95094157_95095824_95096714_95099779_95099936_95103345_95104127_95105070_95105247_95105677_95105784_95106040_95106224_95107607_95107762_95107879_95108094_95108323_95108504_95111316_95111457_95112171_95112248_95113091_95113225_95115666_95115822_95116452_95116696_95117621_95117755_95124195_95124669_95126579_95126749_95129471_95129633_95130057_95130193_95131508_95131640_95132514_95132678_95133314_95133504_95157390
H1_mix_00027339	chr14	-	1942	11	NNC	ENSG00000140105.18	novel	3092	11	NA	NA	0	18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	424.690710988597	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTATTGTAACCTAGAAAG	13	True	NA	-14	True	AATATA	-34	NA	100376299	100334460	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr14_-_100335037_100337061_100337203_100342397_100342572_100343274_100343388_100346745_100346847_100353686_100353870_100354446_100354567_100360553_100360663_100361707_100361923_100369088_100369259_100376259
H1_mix_00027353	chr14	-	7168	22	NIC	ENSG00000198752.11	novel	6844	37	NA	NA	-4148	-1191	intron_retention	FALSE	canonical	3	16	junction_14	6.51424394305739	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATATTGATCAGTTTTAT	NA	False	NA	NA	False	NA	NA	NA	102972680	102933570	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr14_-_102933844_102938103_102938175_102938305_102938412_102939609_102939728_102939829_102939948_102940045_102940131_102940226_102940325_102943890_102944488_102945661_102945725_102946467_102946685_102947720_102947803_102949764_102949905_102950465_102950603_102952497_102952604_102954601_102954689_102959630_102959711_102963060_102963156_102964501_102964651_102966281_102966388_102967045_102967171_102968252_102968359_102968471
H1_mix_00027368	chr14	+	1273	1	Intergenic	novelGene_416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCCGAGGGCCTGCGAT	NA	False	NA	NA	False	NA	NA	NA	20308187	20309460	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr14_+_20308200_20309500
H1_mix_00027380	chr15	+	200	2	ISM	ENSG00000258684.2	ENST00000556075.2	1147	8	770	3332	770	-3332	internal_fragment	FALSE	canonical	3	65	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCGTTGAGATTGAAAATGT	NA	False	NA	NA	False	NA	NA	NA	21161074	21164025	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_21161197_21163947
H1_mix_00027382	chr15	+	6480	35	NNC	ENSG00000276550.5	novel	5746	32	NA	NA	-719	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_21	208.943950365795	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATTACACCCATTATTT	NA	False	NA	NA	False	AATAAA	-20	NA	22494850	22590815	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_22494956_22495569_22495673_22516875_22516991_22534067_22534244_22537437_22537609_22537992_22538097_22539096_22539248_22541994_22542210_22542482_22542616_22542722_22542851_22542942_22543139_22545766_22545901_22546429_22546601_22546677_22546821_22546937_22547090_22547880_22548073_22554384_22554573_22556011_22556205_22556909_22557093_22559788_22559971_22560787_22560936_22561059_22561455_22561558_22562027_22562948_22563088_22564388_22564533_22566304_22566363_22569148_22569292_22572928_22573182_22573278_22573416_22573974_22574074_22577158_22577333_22577429_22577556_22579583_22579724_22587343_22587392_22589942
H1_mix_00027383	chr15	+	6337	37	NNC	ENSG00000276550.5	novel	5746	32	NA	NA	-719	0	at_least_one_novel_splicesite	TRUE	canonical	3	55	junction_3	205.225500785939	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATTACACCCATTATTT	NA	False	NA	NA	False	AATAAA	-20	NA	22494850	22590815	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_22494956_22495569_22495673_22516875_22516991_22523041_22523202_22523346_22523479_22534067_22534244_22537437_22537609_22537992_22538097_22539096_22539248_22541994_22542210_22542482_22542616_22542722_22542851_22542942_22543139_22545766_22545901_22546429_22546601_22546677_22546821_22546937_22547090_22547880_22548073_22554384_22554573_22556011_22556205_22556909_22557093_22559788_22559971_22560787_22560936_22561257_22561455_22561558_22561790_22562948_22563088_22564388_22564533_22566304_22566363_22569148_22569292_22572928_22573182_22573278_22573416_22573974_22574074_22577158_22577333_22577429_22577556_22579583_22579724_22587343_22587392_22589942
H1_mix_00027384	chr15	+	8728	35	NNC	ENSG00000276550.5	novel	5746	32	NA	NA	-719	0	intron_retention	FALSE	canonical	3	20	junction_3	208.624627726732	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATTACACCCATTATTT	NA	False	NA	NA	False	AATAAA	-20	NA	22494850	22590815	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_22494956_22495569_22495673_22516875_22516991_22523346_22523479_22534067_22534244_22537437_22537609_22537992_22538097_22539096_22539248_22541994_22542210_22542482_22542616_22542722_22542851_22542942_22543139_22545766_22545901_22546429_22546601_22546677_22546821_22546937_22547090_22547880_22548073_22554384_22554573_22556011_22556205_22556909_22557093_22559788_22559971_22560787_22560936_22561257_22561455_22561558_22561790_22562948_22563088_22564388_22564533_22566304_22566363_22569148_22569292_22572928_22573182_22573278_22573416_22573974_22574074_22577158_22577333_22577429_22577556_22579583_22579724_22587343
H1_mix_00027385	chr15	+	5886	33	NNC	ENSG00000276550.5	novel	5746	32	NA	NA	-651	-2	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_22	215.153267953191	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATAATTACACCCATTAT	51	False	NA	NA	False	AATAAA	-18	NA	22494918	22590813	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_22494956_22495569_22495673_22516875_22516991_22537437_22537609_22537992_22538097_22539096_22539248_22541994_22542210_22542482_22542616_22542722_22542851_22542942_22543139_22545766_22545901_22546429_22546601_22546677_22546821_22546937_22547090_22547880_22548073_22554384_22554573_22556011_22556205_22556909_22557093_22559788_22559971_22560787_22560936_22561257_22561455_22561558_22561935_22562948_22563088_22564388_22564533_22569148_22569292_22572928_22573182_22573278_22573416_22573974_22574074_22577158_22577333_22577429_22577556_22579583_22579724_22587343_22587392_22589942
H1_mix_00027386	chr15	+	5746	32	FSM	ENSG00000276550.5	ENST00000619021.4	5746	32	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_19	211.426786761398	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATTACACCCATTATTT	NA	False	NA	NA	False	AATAAA	-20	NA	22516908	22590815	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_22516991_22534067_22534244_22537437_22537609_22537992_22538097_22539096_22539248_22541994_22542210_22542482_22542616_22542722_22542851_22542942_22543139_22545766_22545901_22546429_22546601_22546677_22546821_22546937_22547090_22547880_22548073_22554384_22554573_22556011_22556205_22556909_22557093_22559788_22559971_22560787_22560936_22561257_22561455_22561558_22561790_22562948_22563088_22564388_22564533_22569148_22569292_22572928_22573182_22573278_22573416_22573974_22574074_22577158_22577333_22577429_22577556_22579583_22579724_22587343_22587392_22589942
H1_mix_00027387	chr15	+	6187	4	ISM	ENSG00000276550.5	ENST00000690192.1	1766	5	-1881	11	1475	-6	intron_retention	FALSE	canonical	3	803	junction_2	100.492122410996	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTCAATAATTACACCCA	NA	False	NA	NA	False	AATAAA	-14	NA	22574877	22590809	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_22577333_22577429_22577556_22579583_22579724_22587343
H1_mix_00027388	chr15	+	3380	5	FSM	ENSG00000276550.5	ENST00000690192.1	1766	5	-1619	5	-1619	0	multi-exon	FALSE	canonical	3	398	junction_4	238.575328774792	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATTACACCCATTATTT	NA	False	NA	NA	False	AATAAA	-20	NA	22575139	22590815	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_22577333_22577429_22577556_22579583_22579724_22587343_22587392_22589942
H1_mix_00027389	chr15	+	287	1	FSM	ENSG00000277867.1	ENST00000612222.1	287	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTCTCGACTGCCGTTCCC	NA	False	NA	NA	False	NA	NA	NA	22714938	22715225	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_22714900_22715200
H1_mix_00027390	chr15	+	4194	3	FSM	ENSG00000274253.6	ENST00000619879.6	4229	3	35	0	13	0	multi-exon	FALSE	canonical	3	15	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCCCCCATCTGCTCCTC	27	False	NA	NA	False	NA	NA	NA	22757869	22768189	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_22757995_22758818_22758922_22764223
H1_mix_00027391	chr15	+	6650	6	FSM	ENSG00000170113.16	ENST00000557930.1	582	6	-195	-5873	-26	0	multi-exon	FALSE	canonical	3	13	junction_3	51.4563893020099	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTTGATTTTTTTTTT	-24	True	NA	20	True	AATAAA	-21	NA	22786617	22829789	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_22786835_22810748_22810797_22812162_22812254_22814082_22814154_22820312_22820474_22823727
H1_mix_00027392	chr15	+	6572	5	FSM	ENSG00000170113.16	ENST00000337435.9	6553	5	-19	0	-19	0	multi-exon	FALSE	canonical	3	92	junction_3	12.6589889011722	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTTGATTTTTTTTTT	-17	True	NA	20	True	AATAAA	-21	NA	22786624	22829789	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_22786835_22810748_22810797_22812162_22812254_22820312_22820474_22823727
H1_mix_00027393	chr15	+	3150	7	FSM	ENSG00000140157.16	ENST00000674173.1	4076	7	-52	978	-37	0	multi-exon	FALSE	canonical	3	130	junction_1	363.805656299563	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTAGCACTTGAGATTG	NA	False	NA	9	True	AATAAA	-21	NA	22838606	22868384	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_22838922_22845145_22845268_22851638_22851871_22853211_22853269_22858539_22858631_22860628_22860790_22866212
H1_mix_00027394	chr15	+	4756	6	FSM	ENSG00000140157.16	ENST00000359727.8	1531	6	-51	-3174	-37	659	multi-exon	FALSE	canonical	0	0	junction_1	426.294452227565	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCCTCAGCTGCTGGCGA	NA	False	NA	NA	False	NA	NA	NA	22838606	22870021	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_22838948_22845145_22845268_22851638_22851871_22858539_22858631_22860628_22860790_22866212
H1_mix_00027395	chr15	+	3249	8	FSM	ENSG00000140157.16	ENST00000337451.8	3227	8	-22	0	0	0	multi-exon	FALSE	canonical	3	156	junction_2	352.118080843831	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTAGCACTTGAGATTG	-47	True	NA	9	True	AATAAA	-21	NA	22838643	22868384	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_22838922_22839654_22839791_22845145_22845268_22851638_22851871_22853211_22853269_22858539_22858631_22860628_22860790_22866212
H1_mix_00027398	chr15	+	2291	6	FSM	ENSG00000140157.16	ENST00000398013.7	2280	6	-11	0	0	0	multi-exon	FALSE	canonical	3	496	junction_1	191.002198940222	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAGTTCTTATTCTAAAA	-15	True	NA	8	True	AATAAA	-9	NA	22838675	22867716	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_22838922_22851638_22851871_22853211_22853269_22858539_22858631_22860628_22860790_22866212
H1_mix_00027399	chr15	+	4085	7	FSM	ENSG00000140157.16	ENST00000674289.1	4082	7	-3	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	400.02861008794	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGGTGACCTCCATCCC	-15	True	NA	NA	False	NA	NA	NA	22838675	22869362	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_22838948_22845145_22845268_22851638_22851871_22853211_22853269_22858539_22858631_22860628_22860790_22866212
H1_mix_00027401	chr15	+	4298	1	FSM	ENSG00000274099.1	ENST00000614297.1	2181	1	146	-2263	146	2263	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCACAAATATGAAGCTTT	NA	False	NA	NA	False	AATAAA	-23	NA	23180014	23184312	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_23180000_23184300
H1_mix_00027402	chr15	+	2681	9	NNC	ENSG00000274471.2	novel	883	6	NA	NA	-5875	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_6	11.4891252930761	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGCTCCTGGTTTTTGT	2	False	NA	NA	False	AATAAA	-18	NA	23303731	23314566	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_23303819_23304427_23304531_23309139_23309458_23309606_23309736_23310187_23310298_23310802_23310975_23311337_23311513_23311604_23311730_23313104
H1_mix_00027403	chr15	+	10459	1	FSM	ENSG00000185823.5	ENST00000329468.5	7619	1	-2863	23	-2863	-23	mono-exon	FALSE	NA	NA	NA	NA	NA	429	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATGGCCTTACTAAAT	NA	False	NA	NA	False	NA	NA	NA	24672911	24683370	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_24672900_24683400
H1_mix_00027404	chr15	+	1610	12	FSM	ENSG00000128739.23	ENST00000400097.5	1605	12	-5	0	-5	0	multi-exon	FALSE	canonical	3	65	junction_1	3395.95845354177	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTACTGTTGTATATATTT	9	True	NA	21	True	AATAAA	-23	NA	24856545	24978582	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_24856717_24886515_24886590_24920010_24920125_24962113_24962210_24967931_24968083_24974310_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
H1_mix_00027405	chr15	+	849	8	FSM	ENSG00000128739.23	ENST00000553597.5	849	8	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_5	3401.47052233085	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGGTGGAACAGCAATCA	17	True	NA	NA	False	NA	NA	NA	24856600	24974434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_24856717_24886515_24886590_24920010_24920125_24920472_24920548_24921156_24921256_24962113_24962210_24967931_24968083_24974310
H1_mix_00027406	chr15	+	1444	10	FSM	ENSG00000128739.23	ENST00000346403.10	1304	10	0	-140	0	0	multi-exon	FALSE	canonical	3	357	junction_3	2323.23831040072	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCACTTTGTGCATTGAC	NA	False	NA	12	True	GATAAA	-20	NA	24954934	24978723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_24955063_24962113_24962210_24967931_24968083_24974386_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
H1_mix_00027407	chr15	+	1469	10	FSM	ENSG00000128739.23	ENST00000390687.9	1468	10	-1	0	-1	0	multi-exon	FALSE	canonical	3	7312	junction_5	229.178242131898	2778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCACTTTGTGCATTGAC	7	True	NA	12	True	GATAAA	-20	NA	24954985	24978723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_24955063_24962113_24962210_24967931_24968083_24974310_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
H1_mix_00027408	chr15	+	331	4	FSM	ENSG00000273173.5	ENST00000338327.4	331	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	3592.03436632904	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATGTAGATTTATTTAG	35	False	NA	15	True	AATAAA	-23	NA	24955013	24968829	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_24955063_24962113_24962210_24967931_24968083_24968794
H1_mix_00027409	chr15	+	17832	11	FSM	ENSG00000224078.15	ENST00000551631.7	17832	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	375.000746665923	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGCGAGTTCTGGTCATT	1679	False	NA	17	True	AATAAA	-31	NA	24979556	25036490	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_24979643_24979946_24980085_24981774_24982438_24998365_24998487_24998969_24999079_25000244_25000375_25001357_25001714_25002724_25002889_25019026_25019149_25019827_25019870_25020589
H1_mix_00027410	chr15	+	1730	4	NIC	ENSG00000214265.11	novel	1325	8	NA	NA	26960	2128	combination_of_known_splicesites	FALSE	canonical	3	339	junction_1	291.978690242209	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGAGTTTTGTGGTTTT	-2	True	NA	38	True	AATATA	-20	NA	24981993	25002404	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_24982438_24998969_24999079_25000244_25000375_25001357
H1_mix_00027411	chr15	+	1690	4	NIC	ENSG00000224078.15	novel	17832	11	NA	NA	0	846	combination_of_known_splicesites	FALSE	canonical	3	557	junction_1	87.2021916136414	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCATACGTGTACAGCCA	-2	True	NA	5	True	ATTAAA	-10	NA	24981993	25021671	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_24982438_25019026_25019149_25019827_25019870_25020589
H1_mix_00027412	chr15	+	21971	9	NNC	ENSG00000224078.15	novel	17832	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	349.270646311711	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGCGAGTTCTGGTCATT	-2	True	NA	17	True	AATAAA	-31	NA	24981993	25036490	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_24982438_24993783_24998487_24998969_24999079_25000244_25000375_25001357_25001714_25002724_25002889_25019026_25019149_25019827_25019870_25020589
H1_mix_00027413	chr15	+	1850	5	ISM	ENSG00000224078.15	ENST00000551631.7	17832	11	2437	34087	0	-1	internal_fragment	FALSE	canonical	3	91	junction_1	354.200067052506	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGAGTTTTGTGGTTT	-2	True	NA	37	True	AATATA	-19	NA	24981993	25002403	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_24982438_24998365_24998487_24998969_24999079_25000244_25000375_25001357
H1_mix_00027414	chr15	+	2153	6	NNC	ENSG00000224078.15	novel	17832	11	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	411.662677443559	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGAGTTTTGTGGTTTT	10	False	NA	38	True	AATATA	-20	NA	24982005	25002404	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_24982438_24993783_24993852_24998119_24998487_24998969_24999079_25000244_25000375_25001357
H1_mix_00027415	chr15	+	2097	5	NNC	ENSG00000224078.15	novel	17832	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	95	junction_1	352.633219507181	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGAGTTTTGTGGTTTT	-2	True	NA	38	True	AATATA	-20	NA	24981993	25002404	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_24982438_24998119_24998487_24998969_24999079_25000244_25000375_25001357
H1_mix_00027417	chr15	+	1856	5	NIC	ENSG00000224078.15	novel	17832	11	NA	NA	0	848	combination_of_known_junctions	FALSE	canonical	3	69	junction_1	309.424061766373	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATACGTGTACAGCCATT	-2	True	NA	7	True	ATTAAA	-12	NA	24981993	25021673	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_24982438_25002724_25002889_25019026_25019149_25019827_25019870_25020589
H1_mix_00027418	chr15	+	34326	7	NIC	ENSG00000224078.15	novel	17832	11	NA	NA	0	-2	intron_retention	FALSE	canonical	3	187	junction_4	261.103693748076	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACAGCGAGTTCTGGTCA	-2	True	NA	15	True	AATAAA	-29	NA	24981993	25036488	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_24998487_24998969_24999079_25000244_25000375_25001357_25002889_25019026_25019149_25019827_25019870_25020589
H1_mix_00027423	chr15	+	6631	3	FSM	ENSG00000224078.15	ENST00000656463.1	6631	3	0	0	0	0	multi-exon	FALSE	canonical	3	730	junction_1	11	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACTCCATCTCAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25015220	25023250	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25019149_25019827_25019870_25020589
H1_mix_00027424	chr15	+	7671	41	NNC	ENSG00000224078.15	novel	11322	42	NA	NA	0	-4	intron_retention	FALSE	canonical	3	114	junction_8	514.649781404792	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTACTTATCAGTTGAAT	5927	False	NA	6	True	NA	NA	NA	25041973	25119871	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_25042911_25051101_25051237_25053827_25053968_25056482_25056623_25059154_25059295_25059456_25059719_25061949_25062089_25064714_25064856_25067408_25067532_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25079825_25080080_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25096827_25097031_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00027425	chr15	+	15394	38	Fusion	ENSG00000274640.1_ENSG00000224078.15	novel	9815	40	NA	NA	0	0	intron_retention	FALSE	canonical	3	294	junction_6	457.379648836934	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTATCAGTTGAATTACT	5927	False	NA	10	True	AATAAA	-2	NA	25041973	25119875	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr15_+_25051237_25053827_25053968_25056482_25056623_25059154_25059295_25059456_25059719_25061305_25061414_25061949_25062089_25064714_25064856_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00027426	chr15	+	8226	42	NNC	ENSG00000224078.15	novel	11322	42	NA	NA	0	0	intron_retention	FALSE	canonical	3	38	junction_3	511.434620076438	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAATTCTTTTGTGTTTT	5927	False	NA	26	True	CATAAA	-20	NA	25041973	25120426	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_25042911_25051101_25051237_25053827_25053968_25055073_25055231_25056482_25056623_25059154_25059295_25059456_25059719_25061305_25061414_25061949_25062089_25064714_25064856_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25096827_25097031_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00027427	chr15	+	9734	38	FSM	ENSG00000224078.15	ENST00000669673.1	9720	38	-14	0	-14	0	multi-exon	FALSE	canonical	3	31	junction_21	505.627036243971	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGTAACACATTCATAT	5913	False	NA	-1	True	AATAAA	-9	NA	25041959	25122467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25042911_25051101_25051237_25053827_25053968_25056482_25056623_25059154_25059295_25059456_25059719_25061949_25062089_25064714_25064856_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091768_25091932_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00027428	chr15	+	9815	40	FSM	ENSG00000224078.15	ENST00000654223.1	9815	40	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_7	503.803373926003	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGTAACACATTCATAT	1717	False	NA	-1	True	AATAAA	-9	NA	25050525	25122467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25051237_25053827_25053968_25056482_25056623_25059154_25059295_25059456_25059719_25061949_25062089_25064714_25064856_25067408_25067532_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25079825_25080080_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00027431	chr15	+	7504	40	FSM	ENSG00000224078.15	ENST00000661253.1	7504	40	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	530.538959091357	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTATCAGTTGAATTACTG	5397	False	NA	11	True	AATAAA	-3	NA	25054205	25119876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25055231_25056482_25056623_25059154_25059295_25059456_25059719_25061949_25062089_25064714_25064856_25067408_25067532_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25079825_25080080_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25101822_25101932_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118270_25118383_25119064
H1_mix_00027432	chr15	+	7914	33	FSM	ENSG00000224078.15	ENST00000655153.1	7914	33	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_20	549.652699296337	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGTAACACATTCATAT	NA	False	NA	-1	True	AATAAA	-9	NA	25064832	25122467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25064856_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25079825_25080080_25081090_25081225_25082588_25082706_25083395_25083528_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095729_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25101822_25101932_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109100_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00027435	chr15	+	8201	32	FSM	ENSG00000224078.15	ENST00000666289.1	8201	32	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	471.374497351503	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGTAACACATTCATAT	NA	False	NA	-1	True	AATAAA	-9	NA	25065025	25122467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25065455_25067408_25067532_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109100_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00027436	chr15	+	8415	34	FSM	ENSG00000224078.15	ENST00000670394.1	8415	34	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	524.877807285038	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGTAACACATTCATAT	NA	False	NA	-1	True	AATAAA	-9	NA	25065025	25122467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25065455_25067408_25067532_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25077218_25077317_25078861_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00027437	chr15	+	8307	33	FSM	ENSG00000224078.15	ENST00000657237.1	8307	33	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	507.797894982283	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGTAACACATTCATAT	NA	False	NA	-1	True	AATAAA	-9	NA	25065025	25122467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25065455_25067411_25067532_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25080124_25080230_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00027438	chr15	+	8498	34	FSM	ENSG00000224078.15	ENST00000653407.1	8498	34	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	514.616401219433	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGTAACACATTCATAT	NA	False	NA	-1	True	AATAAA	-9	NA	25065091	25122467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25065455_25067411_25067532_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25079825_25080080_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109100_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00027439	chr15	+	9585	30	FSM	ENSG00000224078.15	ENST00000671374.1	9585	30	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_19	435.998933662203	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATACAGTGTATGAAGAGA	NA	False	NA	93	True	TATAAA	-26	NA	25070146	25122561	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25117516_25118267_25118383_25119064
H1_mix_00027440	chr15	+	5289	27	NIC	ENSG00000224078.15	novel	8307	33	NA	NA	725	0	combination_of_known_junctions	FALSE	canonical	3	99	junction_6	465.518348553778	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAATTCTTTTGTGTTTT	NA	False	NA	26	True	CATAAA	-20	NA	25073831	25120426	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25081090_25081225_25082588_25082706_25083366_25083528_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00027441	chr15	+	6939	25	FSM	ENSG00000224078.15	ENST00000661738.1	6939	25	0	0	0	0	multi-exon	FALSE	canonical	3	633	junction_1	377.415863968382	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGTAACACATTCATAT	NA	False	NA	-1	True	AATAAA	-9	NA	25078870	25122467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00027442	chr15	+	5027	20	FSM	ENSG00000224078.15	ENST00000553108.2	5027	20	0	0	0	0	multi-exon	FALSE	canonical	3	633	junction_1	361.32664912572	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCATTAATAACCTGGTGA	NA	False	NA	31	True	NA	NA	NA	25078953	25111998	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554
H1_mix_00027444	chr15	+	13215	24	FSM	ENSG00000224078.15	ENST00000660956.1	13199	24	-16	0	-16	0	multi-exon	FALSE	canonical	3	176	junction_1	465.784493845592	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATACAGTGTATGAAGAGA	NA	False	NA	93	True	TATAAA	-26	NA	25079041	25122561	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25080080_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25117516_25118267_25118383_25119064
H1_mix_00027445	chr15	+	4282	22	FSM	ENSG00000224078.15	ENST00000655258.1	4259	22	-23	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	530.89227078062	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTCACCTATGTTAAATT	2095	False	NA	8	True	CATAAA	-2	NA	25081153	25120408	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25081225_25082588_25082706_25083395_25083528_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118270_25118383_25119064
H1_mix_00027446	chr15	+	666	1	FSM	ENSG00000207174.1	ENST00000384445.1	92	1	61	-635	61	635	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGTTTGGCAGGTTT	2289	False	NA	NA	False	NA	NA	NA	25081347	25082013	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25081300_25082000
H1_mix_00027447	chr15	+	8104	22	FSM	ENSG00000224078.15	ENST00000661541.1	8095	22	-9	0	0	0	multi-exon	FALSE	canonical	3	73	junction_5	494.077555031078	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGTAACACATTCATAT	3604	False	NA	-1	True	AATAAA	-9	NA	25082662	25122467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089911_25090011_25091589_25091720_25093833_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00027448	chr15	+	4656	19	ISM	ENSG00000224078.15	ENST00000655993.1	7238	20	2537	2059	0	0	3prime_fragment	FALSE	canonical	3	751	junction_4	301.886026240875	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTCACCTATGTTAAATT	NA	False	NA	8	True	CATAAA	-2	NA	25089063	25120408	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00027449	chr15	+	6823	20	FSM	ENSG00000224078.15	ENST00000665930.1	6823	20	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_13	474.506280808079	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGTAACACATTCATAT	NA	False	NA	-1	True	AATAAA	-9	NA	25089063	25122467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109100_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00027450	chr15	+	4269	19	NNC	ENSG00000224078.15	novel	6659	20	NA	NA	-173	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	477.824174103848	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAATTCTTTTGTGTTTT	NA	False	NA	26	True	CATAAA	-20	NA	25089372	25120426	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_25089867_25091589_25091724_25093833_25093975_25095626_25095729_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00027456	chr15	+	4139	16	NNC	ENSG00000224078.15	novel	6540	16	NA	NA	-59	0	at_least_one_novel_splicesite	FALSE	canonical	3	270	junction_1	371.58180795082	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTCACCTATGTTAAATT	5840	False	NA	8	True	CATAAA	-2	NA	25096271	25120408	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_25097031_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00027457	chr15	+	4322	11	FSM	ENSG00000224078.15	ENST00000668444.1	4315	11	-7	0	0	0	multi-exon	FALSE	canonical	3	220	junction_8	433.767091882268	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTGAGCATGGTGGTGC	5899	False	NA	NA	False	AATACA	-6	NA	25096330	25113773	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109100_25109197_25109404_25109554_25109716_25111764
H1_mix_00027459	chr15	+	6429	15	FSM	ENSG00000224078.15	ENST00000669814.1	6429	15	0	0	0	0	multi-exon	FALSE	canonical	3	850	junction_3	233.574934442889	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGTAACACATTCATAT	5899	False	NA	-1	True	AATAAA	-9	NA	25096330	25122467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00027460	chr15	+	7553	16	FSM	ENSG00000224078.15	ENST00000654058.1	7549	16	-4	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	484.070031664382	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGTAACACATTCATAT	5899	False	NA	-1	True	AATAAA	-9	NA	25096330	25122467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25097440_25098716_25098829_25099144_25100291_25100778_25100891_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00027462	chr15	+	5196	11	FSM	ENSG00000224078.15	ENST00000657002.1	5196	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	474.681198279435	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGTAACACATTCATAT	NA	False	NA	-1	True	AATAAA	-9	NA	25106520	25122467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25106886_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00027464	chr15	+	2558	11	FSM	ENSG00000186297.12	ENST00000335625.10	2553	11	-5	0	-5	0	multi-exon	FALSE	canonical	3	33	junction_1	42.8113302759912	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATAGGATTCTTTTTTTT	-18	True	NA	17	True	AATAAA	-21	NA	26867056	26949208	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_26867112_26868728_26868794_26869174_26869335_26880845_26880968_26883165_26883234_26883336_26883558_26914802_26914886_26937184_26937329_26939924_26940078_26943214_26943427_26947933
H1_mix_00027465	chr15	+	2771	11	FSM	ENSG00000186297.12	ENST00000400081.7	2761	11	-10	0	-4	0	multi-exon	FALSE	canonical	3	56	junction_1	37.7311542362542	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATAGGATTCTTTTTTT	3	True	NA	16	True	AATAAA	-20	NA	26867115	26949207	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_26867385_26868728_26868794_26869174_26869335_26880845_26880968_26883165_26883234_26883336_26883558_26914802_26914886_26937184_26937329_26939924_26940078_26943214_26943427_26947933
H1_mix_00027466	chr15	+	2742	11	NIC	ENSG00000186297.12	novel	2761	11	NA	NA	8	-8	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	40.7597841014891	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTGGACATATAGGATT	-14	True	NA	8	True	AATAAA	-12	NA	26867170	26949199	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_26867419_26868728_26868794_26869174_26869335_26880845_26880968_26883165_26883234_26883336_26883558_26914802_26914886_26937184_26937329_26939924_26940078_26943214_26943427_26947933
H1_mix_00027468	chr15	+	416	1	FSM	ENSG00000256338.2	ENST00000544920.2	409	1	11	-18	11	18	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTGTGGTGGTGCACAC	10	False	NA	35	True	AATAAA	-37	NA	28315661	28316077	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_28315700_28316100
H1_mix_00027469	chr15	+	2089	1	FSM	ENSG00000261524.1	ENST00000561950.1	2166	1	130	-53	130	53	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGAAAAAAAAAACCTCAGA	NA	False	NA	NA	False	AAAACA	-7	NA	28402997	28405086	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_28403000_28405100
H1_mix_00027470	chr15	+	5187	32	NNC	ENSG00000206149.11	novel	5187	33	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	20	junction_3	235.161498296293	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTTGCAGCCTTCACTT	10	True	NA	NA	False	NA	NA	NA	28589491	28682178	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_28589549_28590157_28590261_28612058_28612174_28629265_28629442_28632636_28632808_28633191_28633296_28633589_28633741_28636486_28636702_28636974_28637108_28637214_28637343_28637434_28637631_28640258_28640393_28640921_28641093_28641169_28641313_28641429_28641582_28642372_28642565_28648879_28649068_28650506_28650700_28651404_28651556_28654273_28654456_28655272_28655421_28655795_28656027_28657186_28657326_28658622_28658767_28663377_28663521_28667195_28667464_28667560_28667698_28668256_28668356_28671459_28671634_28671730_28671857_28673887_28674028_28681795
H1_mix_00027471	chr15	+	8309	32	NNC	ENSG00000206149.11	novel	5187	33	NA	NA	0	-7	intron_retention	TRUE	canonical	3	10	junction_20	239.131410370111	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCAATAATTACACCCAT	10	True	NA	NA	False	AATAAA	-15	NA	28589491	28685257	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_28589549_28590157_28590261_28612058_28612174_28632636_28632808_28633191_28633296_28633589_28633741_28636486_28636702_28636974_28637108_28637214_28637343_28637434_28637631_28640236_28640393_28640921_28641093_28641169_28641313_28641429_28641582_28642372_28642565_28648879_28649068_28650506_28650700_28651404_28651556_28654273_28654456_28655272_28655421_28655494_28655692_28655795_28656027_28657186_28657326_28658622_28658767_28663377_28663521_28667195_28667464_28667560_28667698_28668256_28668356_28671459_28671634_28671730_28671857_28673887_28674028_28681795
H1_mix_00027475	chr15	+	2947	14	FSM	ENSG00000206149.11	ENST00000528584.5	2947	14	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	338.32359076926	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTACACCCATTATTTCT	NA	False	NA	NA	False	AATAAA	-22	NA	28654441	28685264	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_28654456_28655272_28655421_28655795_28656027_28657186_28657326_28658622_28658767_28663377_28663521_28667195_28667464_28667560_28667698_28668256_28668356_28671459_28671634_28671730_28671857_28673887_28674028_28681795_28681844_28684128
H1_mix_00027476	chr15	+	4285	4	ISM	ENSG00000206149.11	ENST00000528584.5	2947	14	16642	0	-751	0	intron_retention	FALSE	canonical	3	802	junction_2	94.4681016122491	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTACACCCATTATTTCT	1	False	NA	NA	False	AATAAA	-22	NA	28671083	28685264	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_28671634_28671730_28671857_28673887_28674028_28681795
H1_mix_00027477	chr15	+	2996	5	NNC	ENSG00000206149.11	novel	2947	14	NA	NA	-2010	0	at_least_one_novel_splicesite	FALSE	canonical	3	352	junction_4	249.225174290239	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTACACCCATTATTTCT	NA	False	NA	NA	False	AATAAA	-22	NA	28669824	28685264	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_28671634_28671730_28671857_28673887_28674028_28681795_28681844_28684391
H1_mix_00027479	chr15	+	482	4	ISM	ENSG00000261377.6	ENST00000566321.5	1069	7	6967	83	6967	-83	3prime_fragment	FALSE	canonical	1	2	junction_3	68.0506347427332	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGAAATCCTGGTCAGG	NA	False	NA	NA	False	NA	NA	NA	28808332	28818916	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_28808418_28815346_28815596_28816752_28816888_28818903
H1_mix_00027480	chr15	+	3318	5	FSM	ENSG00000261377.6	ENST00000566178.5	3351	5	-10	43	-10	-43	multi-exon	FALSE	canonical	3	6	junction_4	16.422164899915	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGCTAAGAAATGAAATCC	-7	True	NA	NA	False	NA	NA	NA	28832310	28858964	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_28832461_28833275_28833379_28838687_28838823_28846738_28846837_28856132
H1_mix_00027481	chr15	+	480	3	FSM	ENSG00000261377.6	ENST00000563144.2	581	3	96	5	49	-5	multi-exon	FALSE	canonical	3	40	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTTTATGTGTACAGTT	62	False	NA	30	True	AATATA	-26	NA	28832379	28838983	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_28832461_28833275_28833379_28838687
H1_mix_00027482	chr15	+	4170	14	NIC	ENSG00000034053.15	novel	3941	15	NA	NA	-195	70	combination_of_known_junctions	FALSE	canonical	3	101	junction_3	11.5625389812233	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGCTCTGCAAATTCACTAT	NA	False	NA	90	True	NA	NA	NA	28885778	29118385	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_28886279_28921639_28921750_28995752_28995807_29053844_29054836_29074920_29075002_29076054_29076092_29093074_29093221_29098489_29098577_29101598_29101785_29105378_29105559_29106606_29106820_29108269_29108390_29113875_29114017_29117061
H1_mix_00027483	chr15	+	3336	14	NNC	ENSG00000034053.15	novel	3941	15	NA	NA	-19	4	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_7	31.0412971729197	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTATTTAGATGCTATT	NA	False	NA	38	True	AATAAA	-28	NA	28885954	29117721	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_28886279_28921639_28921750_28995752_28995807_29053844_29054836_29074920_29075002_29076054_29076092_29093074_29093227_29098489_29098577_29101598_29101785_29105378_29105559_29106606_29106820_29108269_29108390_29113875_29114017_29117061
H1_mix_00027484	chr15	+	2530	2	FSM	ENSG00000256802.3	ENST00000536835.3	2588	2	58	0	2	0	multi-exon	FALSE	canonical	3	6	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAAAGTGAGGCCGGGCA	-2	True	NA	NA	False	AAGAAA	-15	NA	29674989	29679168	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_29675527_29677175
H1_mix_00027485	chr15	+	345	2	Genic_Genomic	ENSG00000234664.1	novel	273	1	NA	NA	0	831	multi-exon	FALSE	canonical	1	39	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGTAAATAAAACAAGGA	97	False	NA	NA	False	AATAAA	-34	NA	29730712	29731816	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr15_+_29730866_29731624
H1_mix_00027486	chr15	+	474	1	Intergenic	novelGene_461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAATAAAACAAGGATCTG	731	False	NA	NA	False	AATAAA	-38	NA	29731346	29731820	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_29731300_29731800
H1_mix_00027487	chr15	+	737	1	FSM	ENSG00000259523.1	ENST00000557989.1	1451	1	486	228	486	-228	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCGAGCGGATCACGAGG	1538	False	NA	NA	False	NA	NA	NA	29823116	29823853	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_29823100_29823900
H1_mix_00027488	chr15	+	1469	5	FSM	ENSG00000178081.12	ENST00000568486.5	1158	5	-42	-269	-30	269	multi-exon	FALSE	canonical	2	6	junction_2	2.34520787991171	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTCTATTCCATCTAG	NA	False	NA	NA	False	AATATA	-26	NA	30103689	30132026	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_30104009_30110301_30110427_30116891_30116939_30127684_30127764_30131127
H1_mix_00027489	chr15	+	521	3	FSM	ENSG00000178081.12	ENST00000566138.5	533	3	0	12	0	-12	multi-exon	FALSE	canonical	1	3	junction_2	4	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATACGAATATGAAATTTA	NA	False	NA	NA	False	CATAAA	-33	NA	30103721	30114016	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_30104009_30110301_30110427_30113907
H1_mix_00027491	chr15	+	1209	2	NNC	ENSG00000215302.8	novel	618	3	NA	NA	-25	-3699	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATACTTTCAGTTTTCTGG	NA	False	NA	NA	False	AATAAA	-11	NA	30484518	30490308	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_30484687_30489267
H1_mix_00027492	chr15	+	592	6	FSM	ENSG00000260128.6	ENST00000561753.5	573	6	-19	0	8	0	multi-exon	FALSE	canonical	2	6	junction_4	2.41660919471891	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAACAGTCCCAGAACTCC	NA	False	NA	NA	False	TTTAAA	-37	NA	30572745	30600107	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_30573017_30579287_30579413_30582893_30582958_30585877_30585925_30596659_30596739_30600101
H1_mix_00027493	chr15	+	3361	1	FSM	ENSG00000269930.1	ENST00000602594.1	792	1	-2570	1	-2570	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAAGTGTTGTTTTTGCCTT	NA	False	NA	-3	True	AATAAA	-15	NA	30614387	30617748	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_30614400_30617700
H1_mix_00027494	chr15	+	3256	11	FSM	ENSG00000285077.3	ENST00000428041.4	3256	11	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_10	74.4170007457973	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTGTGAATATCTGATC	198	False	NA	NA	False	AATAAA	-25	NA	30625965	30649529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_30626950_30630702_30630774_30633489_30633587_30634169_30634424_30635079_30635189_30635486_30635634_30638745_30638821_30644638_30644703_30646113_30646296_30647667_30647715_30648303
H1_mix_00027495	chr15	+	7489	14	NIC	ENSG00000284906.3	novel	7464	15	NA	NA	-113	-9	combination_of_known_splicesites	FALSE	canonical	2	11	junction_10	68.143687383187	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTGCTTTCAAAAAGTTT	248	False	NA	11	True	AATAAA	-14	NA	30626015	30772993	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_30626950_30630702_30630774_30633489_30633587_30634169_30634424_30635079_30635189_30635486_30635634_30638745_30638821_30644638_30644703_30646113_30646296_30647667_30647715_30716219_30716343_30748575_30748671_30750401_30750557_30767857
H1_mix_00027496	chr15	+	405	2	FSM	ENSG00000285077.3	ENST00000568574.1	405	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAGAAAAGAAAT	7647	False	NA	NA	False	NA	NA	NA	30634324	30635385	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_30634424_30635079
H1_mix_00027498	chr15	+	488	3	NNC	ENSG00000259845.1	novel	2393	16	NA	NA	-2343	-28696	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCCCCATCACAGTGTGC	NA	False	NA	NA	False	NA	NA	NA	30812927	30815457	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_30813163_30813275_30813346_30815274
H1_mix_00027499	chr15	+	4736	15	FSM	ENSG00000198690.10	ENST00000670849.1	4714	15	-22	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	42.0568735433924	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTGCTCTTTCCAATGT	3	True	NA	NA	False	TTTAAA	-28	NA	30903863	30942931	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_30904025_30904511_30905898_30908117_30908259_30910613_30910816_30913857_30914092_30918163_30918296_30920544_30920654_30922234_30922355_30925126_30925292_30925788_30925940_30928552_30928657_30929202_30929398_30930542_30930672_30937118_30937260_30941565
H1_mix_00027501	chr15	+	2687	4	FSM	ENSG00000198690.10	ENST00000561607.6	2687	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	76.5259578327656	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTATAGAATCCTCATCT	-14	True	NA	16	True	AATAAA	-28	NA	30903891	30911640	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_30904025_30904511_30905898_30908117_30908259_30910613
H1_mix_00027503	chr15	+	4882	15	FSM	ENSG00000198690.10	ENST00000362065.9	4849	15	-85	52	-22	0	multi-exon	FALSE	canonical	3	111	junction_1	30.3342771027585	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTATAGCAAATTCCTGC	92	False	NA	NA	False	NA	NA	NA	30903829	30943056	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_30904012_30904511_30905898_30908117_30908259_30910613_30910816_30913857_30914092_30918163_30918296_30920544_30920654_30922234_30922355_30925126_30925292_30925788_30925940_30928552_30928657_30929202_30929398_30930542_30930672_30937118_30937260_30941565
H1_mix_00027504	chr15	+	2074	2	FSM	ENSG00000259448.3	ENST00000654993.1	2073	2	-1424	1423	-1424	-1198	multi-exon	FALSE	canonical	3	13	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGTGTGTGCATGTGTG	NA	False	NA	NA	False	AATAAA	-21	NA	31214197	31219522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_31216038_31219288
H1_mix_00027505	chr15	+	6921	2	FSM	ENSG00000169926.11	ENST00000307145.4	6845	2	-76	0	-76	0	multi-exon	TRUE	canonical	0	0	junction_1	0	253	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGGAGCTAGTTTCTT	29	True	NA	20	True	AATAAA	-21	NA	31326758	31377899	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_31327790_31372009
H1_mix_00027506	chr15	+	6148	10	FSM	ENSG00000175344.19	ENST00000306901.9	6149	10	-2	3	1	-3	multi-exon	FALSE	canonical	3	25	junction_8	10.1105005920687	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTGCGTAGTTTTGTAA	-2	True	NA	NA	False	AATAAA	-24	NA	32030512	32173015	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_32030650_32030897_32031038_32101302_32101348_32111789_32111900_32153906_32153987_32157607_32157776_32158411_32158607_32159568_32159656_32163225_32163336_32167939
H1_mix_00027507	chr15	+	269	3	FSM	ENSG00000232653.8	ENST00000605665.1	271	3	1	1	1	-1	multi-exon	FALSE	canonical	0	0	junction_1	0.5	324	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGGGAGGCCAGGGCA	NA	False	NA	NA	False	AAAACA	-43	NA	32602012	32603286	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_32602089_32602519_32602612_32603185
H1_mix_00027508	chr15	+	5876	12	FSM	ENSG00000198826.11	ENST00000361627.8	5876	12	0	0	0	0	multi-exon	TRUE	canonical	3	299	junction_11	42.6040777158305	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGTTATCTAATAACAAC	-11	True	NA	11	True	AATAAA	-14	NA	32615503	32639941	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_32616341_32620107_32620179_32623491_32623589_32624172_32624427_32625079_32625244_32625486_32625634_32628727_32628803_32629594_32629763_32632978_32633109_32633932_32634042_32635776_32635916_32636256
H1_mix_00027509	chr15	+	2422	11	FSM	ENSG00000198826.11	ENST00000567348.5	2422	11	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_7	39.188773902739	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCATGTGCTTGGGTAT	24	False	NA	4	True	ATTAAA	-15	NA	32615538	32636181	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_32616341_32620107_32620179_32623491_32623589_32624172_32624427_32625079_32625244_32625486_32625634_32628727_32628803_32629594_32629763_32632978_32633109_32633932_32634042_32635776
H1_mix_00027510	chr15	+	2279	11	FSM	ENSG00000198826.11	ENST00000563864.5	2279	11	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_8	108.392988703144	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACTTTATTAGAATTAAAT	10	False	NA	-29	True	NA	NA	NA	32615564	32636148	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_32616341_32620107_32620179_32623491_32623589_32624172_32624427_32625079_32625244_32625486_32625634_32628727_32628803_32629594_32629763_32633062_32633109_32633932_32634042_32635776
H1_mix_00027511	chr15	+	620	6	FSM	ENSG00000198826.11	ENST00000562481.1	620	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	110.391304005343	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAATAATTCAAGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	32628727	32636342	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_32628803_32629594_32629676_32632978_32633109_32633932_32634042_32635776_32635916_32636256
H1_mix_00027513	chr15	+	1229	6	FSM	ENSG00000166922.9	ENST00000413748.6	1235	6	0	6	0	0	multi-exon	FALSE	canonical	3	58	junction_3	11.5308282443197	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCATATGGAGTTTTCTT	-38	True	NA	6	True	AATAAA	-15	NA	32641675	32697092	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_32641779_32643585_32643819_32679765_32679916_32684559_32684670_32691709_32691764_32696513
H1_mix_00027514	chr15	+	1171	5	FSM	ENSG00000166922.9	ENST00000494364.5	1148	5	-23	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	34.3729544845944	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTGGCATATGGAGTTT	-38	True	NA	2	True	AATAAA	-11	NA	32641675	32697088	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_32641779_32643585_32643819_32679765_32679916_32684559_32684670_32696513
H1_mix_00027515	chr15	+	1238	6	FSM	ENSG00000166922.9	ENST00000300175.9	1198	6	-34	-6	0	0	multi-exon	FALSE	canonical	3	31	junction_3	21.3766227454198	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAGTTTTCTTTTTAAA	-38	True	NA	12	True	AATAAA	-21	NA	32641675	32697098	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_32641779_32643585_32643819_32679765_32679916_32684556_32684670_32691709_32691764_32696513
H1_mix_00027516	chr15	+	601	1	FSM	ENSG00000182405.6	ENST00000397766.4	6604	1	6	5997	6	-5997	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCCCATTTAGAATCTG	16	True	NA	NA	False	NA	NA	NA	34102088	34102689	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_34102100_34102700
H1_mix_00027518	chr15	+	880	4	FSM	ENSG00000128463.13	ENST00000249209.8	852	4	-28	0	-28	0	multi-exon	FALSE	canonical	3	180	junction_3	550.97872513878	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAAAAGTTGCACAAGT	NA	False	NA	17	True	AATAAA	-22	NA	34224984	34230147	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_34225201_34225535_34225651_34227692_34227847_34229752
H1_mix_00027519	chr15	+	1026	5	FSM	ENSG00000128463.13	ENST00000267750.9	1019	5	-7	0	-4	0	multi-exon	FALSE	canonical	3	1237	junction_3	48.6492548761027	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCACAAGTTCCTTATTT	-11	True	NA	26	True	AATAAA	-31	NA	34225008	34230156	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_34225201_34225535_34225651_34227692_34227847_34228428_34228590_34229752
H1_mix_00027520	chr15	+	1108	5	FSM	ENSG00000128463.13	ENST00000558205.5	1006	5	-52	-50	-28	50	multi-exon	FALSE	canonical	3	90	junction_2	528.880598528628	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGGGACATAAAAATTCTG	NA	False	NA	76	True	AATACA	-2	NA	34224984	34230206	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_34225201_34225535_34225659_34227692_34227847_34228428_34228590_34229752
H1_mix_00027521	chr15	+	336	1	FSM	ENSG00000231409.3	ENST00000491307.1	315	1	-21	0	-21	0	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTCATCTTTTATTAT	5	False	NA	NA	False	NA	NA	NA	34943058	34943394	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_34943100_34943400
H1_mix_00027522	chr15	+	2881	11	FSM	ENSG00000186073.14	ENST00000566621.6	2872	11	-9	0	-9	0	multi-exon	FALSE	canonical	3	51	junction_7	6.28410693734599	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACTTGCGTTTTGTATTT	-22	True	NA	1	True	AATAAA	-16	NA	36579616	36810244	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_36579962_36644277_36644324_36645222_36645288_36654097_36654159_36657832_36657906_36691684_36691765_36692125_36692176_36697322_36697391_36709222_36709289_36709855_36709962_36808323
H1_mix_00027523	chr15	+	972	8	ISM	ENSG00000186073.14	ENST00000642817.1	2506	10	10	100453	10	-409	5prime_fragment	FALSE	canonical	1	5	junction_1	19.7608146572546	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTTGTCATTTTCAAC	23	True	NA	NA	False	AATAAA	-18	NA	36579661	36709497	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_36579962_36645222_36645288_36654097_36654159_36657832_36657906_36691684_36691765_36692125_36692176_36697322_36697391_36709222
H1_mix_00027524	chr15	+	2240	12	FSM	ENSG00000186073.14	ENST00000437989.6	2240	12	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_11	15.0173453432031	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACTTGCGTTTTGTATTT	57	False	NA	1	True	AATAAA	-16	NA	36579843	36810244	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_36579962_36644277_36644324_36645222_36645288_36654097_36654159_36657832_36657906_36691684_36691765_36692125_36692176_36697322_36697391_36709222_36709289_36709855_36709962_36808323_36808490_36808903
H1_mix_00027525	chr15	+	3486	5	FSM	ENSG00000166068.13	ENST00000561205.1	1177	5	-826	-1483	-814	1483	multi-exon	FALSE	canonical	3	13	junction_4	114.724398015418	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGAATGCACAAGCAGTA	NA	False	NA	43	True	NA	NA	NA	38252021	38327846	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_38253218_38299372_38299548_38322240_38322410_38324762_38324810_38325947
H1_mix_00027526	chr15	+	7270	7	FSM	ENSG00000166068.13	ENST00000299084.9	7270	7	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_2	20.6074420214316	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAAATAGTGTTTCTTTT	11	True	NA	15	True	AATAAA	-19	NA	38252835	38357249	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_38253218_38299372_38299548_38322240_38322410_38324762_38324810_38339736_38339896_38349421_38349524_38351013
H1_mix_00027527	chr15	+	4388	8	FSM	ENSG00000171262.11	ENST00000397609.6	4388	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	2.24971653543195	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGCTGTCGTTACCAATT	-20	True	NA	NA	False	AATAAA	-28	NA	38454126	38487710	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_38454233_38464031_38464178_38465268_38465404_38470226_38470406_38473504_38473586_38474181_38474299_38481291_38481460_38484254
H1_mix_00027530	chr15	+	7845	22	FSM	ENSG00000137801.11	ENST00000260356.6	7789	22	1	-57	1	57	multi-exon	FALSE	canonical	3	31	junction_3	10.6649658507957	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCTCCCTCCTCCTTCTT	3	True	NA	NA	False	NA	NA	NA	39581079	39599523	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_39581229_39581828_39581925_39582192_39582753_39583616_39583693_39583987_39584188_39584299_39584423_39585469_39585564_39587346_39587521_39588041_39588219_39588525_39588700_39588958_39589087_39589201_39589355_39589804_39590024_39590515_39590624_39591190_39591351_39591504_39591624_39592567_39592803_39592999_39593228_39593396_39593669_39594098_39594197_39594300_39594441_39595361
H1_mix_00027531	chr15	+	2993	1	FSM	ENSG00000261136.1	ENST00000564211.1	3047	1	60	-6	60	6	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTTCACTGTTTGTAAC	NA	False	NA	12	True	AATAAA	-25	NA	39782630	39785623	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_39782600_39785600
H1_mix_00027532	chr15	+	5538	39	FSM	ENSG00000128829.12	ENST00000263791.10	5538	39	0	0	0	0	multi-exon	TRUE	canonical	3	369	junction_12	46.3568373726157	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTGCTTTTTAATTGTA	-30	True	NA	24	True	AATAAA	-13	NA	39934114	40035591	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_39934340_39939504_39939618_39943382_39943486_39949115_39949269_39953903_39953985_39955619_39955769_39961783_39961900_39965685_39965844_39967343_39967880_39972907_39973015_39973591_39973750_39976413_39976845_39978077_39978148_39985804_39985889_39987982_39988106_39990272_39990378_39992174_39992230_39992768_39992849_39996963_39997066_39998730_39998785_40000987_40001225_40002712_40002789_40003192_40003315_40007015_40007066_40008026_40008196_40009613_40009731_40011280_40011347_40016501_40016673_40017107_40017243_40019092_40019201_40020898_40021028_40022518_40022606_40025976_40026090_40029405_40029465_40030358_40030457_40032168_40032238_40032756_40032802_40034325_40034445_40035026
H1_mix_00027533	chr15	+	4789	34	FSM	ENSG00000128829.12	ENST00000560855.5	4789	34	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_9	87.9047297133026	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTGCTTTTTAATTGTA	NA	False	NA	24	True	AATAAA	-13	NA	39953974	40035591	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_39953985_39955619_39955769_39961783_39961900_39965685_39965844_39967343_39967880_39972907_39973015_39973591_39973750_39976413_39976845_39978077_39978148_39987982_39988106_39990272_39990378_39992174_39992230_39992768_39992849_39996963_39997066_39998730_39998785_40000987_40001225_40002712_40002789_40003192_40003315_40007015_40007066_40008026_40008196_40009613_40009731_40011280_40011347_40016501_40016673_40017107_40017243_40019092_40019201_40020898_40021028_40022518_40022606_40025976_40026090_40029405_40029465_40030358_40030457_40032168_40032238_40032756_40032802_40034325_40034445_40035026
H1_mix_00027536	chr15	+	2603	3	FSM	ENSG00000248508.9	ENST00000504245.7	2560	3	-28	-15	1	15	multi-exon	FALSE	canonical	3	15	junction_2	13.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTGTTTATCAAATTTCG	2873	False	NA	4	True	AATAAA	-21	NA	40039245	40067511	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40039449_40045960_40046070_40065220
H1_mix_00027537	chr15	+	2744	4	FSM	ENSG00000248508.9	ENST00000668306.2	942	4	1	-1803	1	15	multi-exon	FALSE	canonical	3	7	junction_2	14.8398861930347	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTGTTTATCAAATTTCG	2873	False	NA	4	True	AATAAA	-21	NA	40039245	40067511	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40039449_40045960_40046070_40064460_40064602_40065220
H1_mix_00027538	chr15	+	582	3	FSM	ENSG00000248508.9	ENST00000660446.2	613	3	31	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	14	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCCTCCTAATTTTTCC	-14	True	NA	NA	False	TATAAA	-26	NA	40039290	40057003	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40039449_40045960_40046070_40056688
H1_mix_00027539	chr15	+	3669	23	FSM	ENSG00000156970.13	ENST00000287598.11	3669	23	0	0	0	0	multi-exon	TRUE	canonical	3	565	junction_5	70.7227154409306	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGCTTCTAACATGTCA	15	True	NA	15	True	AATAAA	-16	NA	40161068	40221123	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40161256_40165052_40165197_40170061_40170122_40170536_40170682_40176476_40176674_40183713_40183884_40185164_40185380_40185550_40185643_40196544_40196775_40199614_40199728_40200243_40200360_40200930_40200981_40202404_40202466_40202588_40202695_40206183_40206459_40208636_40208771_40209634_40209776_40210109_40210211_40212498_40212649_40213331_40213475_40217495_40217668_40218455_40218563_40220563
H1_mix_00027540	chr15	+	477	2	FSM	ENSG00000156970.13	ENST00000559461.1	477	2	0	0	0	0	multi-exon	FALSE	canonical	3	680	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGGTCTATATATGCTG	7244	False	NA	NA	False	NA	NA	NA	40183723	40185481	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40183884_40185164
H1_mix_00027541	chr15	+	560	4	FSM	ENSG00000156970.13	ENST00000559772.1	560	4	0	0	0	0	multi-exon	FALSE	canonical	3	626	junction_2	40.1081870279207	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCCGAGTCTCAGAAAATA	8992	False	NA	NA	False	ACTAAA	-11	NA	40185471	40200289	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40185643_40196544_40196775_40199614_40199728_40200243
H1_mix_00027543	chr15	+	5793	1	FSM	ENSG00000273786.1	ENST00000613987.1	684	1	-5012	-97	-5012	97	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTGGACAAAAAGATATGCA	3931	False	NA	103	True	ATTAAA	-40	NA	40221373	40227166	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40221400_40227200
H1_mix_00027544	chr15	+	4020	11	FSM	ENSG00000137843.12	ENST00000560346.5	4020	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	19.5345847153196	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGGGCTTCCTGTGTCTC	159	False	NA	14	True	ATTAAA	-16	NA	40239419	40277485	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40239803_40240598_40240682_40253177_40253290_40264780_40264990_40265841_40266496_40272223_40272722_40272865_40273000_40273345_40273473_40273550_40273677_40274141_40274277_40275926
H1_mix_00027545	chr15	+	598	4	FSM	ENSG00000137843.12	ENST00000559617.5	598	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	5.90668171555645	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGGGCTGCTGGGGGAT	NA	False	NA	NA	False	NA	NA	NA	40252547	40265974	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40252692_40253177_40253290_40264780_40264990_40265841
H1_mix_00027546	chr15	+	3684	10	NIC	ENSG00000137843.12	novel	2540	10	NA	NA	13	0	intron_retention	FALSE	canonical	3	36	junction_5	7.4236858171067	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGCTTCCTGTGTCTCTG	NA	False	NA	16	True	ATTAAA	-18	NA	40252563	40277487	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_40252692_40253177_40253290_40264780_40264990_40265841_40266496_40272223_40272722_40272865_40273000_40273345_40273473_40273550_40273677_40274141_40274277_40275926
H1_mix_00027547	chr15	+	581	4	FSM	ENSG00000137843.12	ENST00000559139.5	571	4	-10	0	-10	0	multi-exon	FALSE	canonical	3	6	junction_1	25.694789787469	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGCACAGTCCCTGGGGCT	232	False	NA	NA	False	NA	NA	NA	40252877	40265964	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40253015_40253177_40253290_40264780_40264990_40265841
H1_mix_00027559	chr15	+	4698	7	FSM	ENSG00000140320.12	ENST00000561234.5	4698	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	19.9164923283862	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGATCGTTTCCTGTGT	2172	False	NA	30	True	AATAAA	-24	NA	40439720	40468229	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40439966_40458450_40459897_40461914_40462295_40463860_40464021_40464470_40464548_40465334_40465436_40465940
H1_mix_00027560	chr15	+	4802	7	NIC	ENSG00000140320.12	novel	4432	6	NA	NA	-111	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	16.4823137534348	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGGATCGTTTCCTGTG	2061	False	NA	29	True	AATAAA	-23	NA	40439609	40468228	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_40439966_40458450_40459897_40461911_40462295_40463860_40464021_40464470_40464548_40465343_40465436_40465940
H1_mix_00027561	chr15	+	4779	7	FSM	ENSG00000140320.12	ENST00000416165.6	4779	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	13.9851111305321	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTTTCCTGTGTGTCCTGT	9	True	NA	37	True	AATAAA	-31	NA	40440952	40468236	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40441269_40458450_40459897_40461911_40462295_40463860_40464021_40464470_40464548_40465334_40465436_40465940
H1_mix_00027565	chr15	+	759	1	FSM	ENSG00000166133.18	ENST00000616318.1	631	1	-129	1	9	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGTTCTCGCTTTCATTTG	-13	True	NA	20	True	ATTAAA	-17	NA	40569307	40570066	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40569300_40570100
H1_mix_00027568	chr15	+	563	6	FSM	ENSG00000051180.17	ENST00000527860.5	566	6	3	0	3	0	multi-exon	FALSE	canonical	1	1	junction_1	156.829333990807	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGGCTGAGAGGTAGGTT	NA	False	NA	NA	False	NA	NA	NA	40694776	40718886	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40694821_40698756_40698846_40701063_40701202_40706176_40706295_40709024_40709117_40718804
H1_mix_00027569	chr15	+	2448	10	FSM	ENSG00000051180.17	ENST00000267868.8	2436	10	-24	12	21	-12	multi-exon	FALSE	canonical	3	343	junction_4	41.7854602865402	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACATACCATGGGTTGC	NA	False	NA	2	True	AATAAA	-3	NA	40695149	40732328	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40695426_40698756_40698846_40701063_40701202_40706176_40706295_40709024_40709117_40718804_40718900_40728710_40728825_40729504_40729635_40729852_40729975_40731054
H1_mix_00027575	chr15	+	1555	10	FSM	ENSG00000166140.17	ENST00000299173.14	1555	10	0	0	0	0	multi-exon	FALSE	canonical	1	23	junction_1	24.2904238612261	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGCATCTCATTTCTACA	509	False	NA	28	True	AATAAA	-19	NA	40807589	40814569	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40807869_40809118_40809241_40809407_40809459_40809851_40809971_40810070_40810217_40810648_40810758_40813337_40813418_40813712_40813812_40813942_40814071_40814147
H1_mix_00027576	chr15	+	2661	9	NIC	ENSG00000166140.17	novel	1555	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	26	junction_5	19.6468827043885	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGCATCTCATTTCTACA	-12	True	NA	28	True	AATAAA	-19	NA	40807733	40814569	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_40809241_40809407_40809459_40809851_40809971_40810070_40810217_40810648_40810758_40813337_40813418_40813712_40813812_40813942_40814071_40814147
H1_mix_00027580	chr15	+	2978	11	FSM	ENSG00000166145.15	ENST00000562057.6	2978	11	0	0	0	0	multi-exon	TRUE	canonical	3	460	junction_5	129.925209255171	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGTTCGTTTATTCAGTGA	2	True	NA	NA	False	NA	NA	NA	40844047	40858207	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40844187_40844489_40845030_40853123_40853252_40853488_40853628_40853710_40853882_40854059_40854087_40854396_40854523_40854638_40854690_40855891_40856063_40856275_40856324_40856769
H1_mix_00027584	chr15	+	798	2	NNC	ENSG00000157021.9	novel	890	2	NA	NA	30	-63	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAGTTAGATGTTACAGA	26	False	NA	NA	False	AAGAAA	-29	NA	41163191	41164311	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_41163440_41163761
H1_mix_00027586	chr15	+	3201	7	FSM	ENSG00000187446.12	ENST00000334660.10	3201	7	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_4	2.3629078131263	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTTTGTCCATTTTACA	-8	True	NA	NA	False	AATAAA	-21	NA	41231267	41281887	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_41231450_41243666_41243740_41256909_41256991_41262755_41262884_41270556_41270619_41278766_41278890_41279335
H1_mix_00027587	chr15	+	1357	1	ISM	ENSG00000187446.12	ENST00000334660.10	3201	7	49260	3	23618	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAACTTTTGTCCATTTT	945	False	NA	NA	False	AATAAA	-18	NA	41280527	41281884	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_41280500_41281900
H1_mix_00027588	chr15	+	856	3	FSM	ENSG00000247556.6	ENST00000558457.5	676	3	-31	-149	-31	149	multi-exon	FALSE	canonical	3	949	junction_1	22.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCTTGAACTTGGGAGG	4376	False	NA	NA	False	NA	NA	NA	41283958	41286575	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_41284111_41285224_41285364_41286010
H1_mix_00027590	chr15	+	8844	4	FSM	ENSG00000247556.6	ENST00000500949.6	8829	4	-15	0	0	0	multi-exon	FALSE	canonical	3	782	junction_3	91.2006335260647	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCATTGTGTGTCGTTACT	-9	True	NA	36	True	AATAAA	-28	NA	41283989	41306534	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_41284111_41285224_41285364_41286010_41286101_41298040
H1_mix_00027592	chr15	+	1385	5	FSM	ENSG00000247556.6	ENST00000501665.2	1384	5	-1	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	466.77778438996	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTTGGTACAGGATCAG	32	False	NA	NA	False	AATAAA	-18	NA	41284030	41309737	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_41284111_41285224_41285364_41286010_41286101_41308566_41308625_41308719
H1_mix_00027594	chr15	+	2273	11	FSM	ENSG00000137804.14	ENST00000559596.6	2263	11	-10	0	0	0	multi-exon	FALSE	canonical	3	1085	junction_6	405.863043402574	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATTCATTCTTTGTAAAC	-6	True	NA	21	True	AATAAA	-18	NA	41332870	41381046	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_41333051_41342385_41342455_41349097_41349242_41350987_41351130_41356038_41356141_41358148_41358259_41365401_41365590_41371526_41371685_41375711_41375829_41377195_41377305_41380092
H1_mix_00027595	chr15	+	2274	11	FSM	ENSG00000137804.14	ENST00000414849.6	2274	11	0	0	0	0	multi-exon	FALSE	canonical	3	1174	junction_6	386.805946179735	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATTCTTTGTAAACATAA	-6	True	NA	25	True	AATAAA	-22	NA	41332870	41381050	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_41333051_41342385_41342455_41349097_41349242_41350987_41351130_41356038_41356141_41358148_41358259_41365404_41365590_41371526_41371685_41375711_41375829_41377195_41377305_41380092
H1_mix_00027596	chr15	+	2271	11	FSM	ENSG00000137804.14	ENST00000560747.5	2256	11	-15	0	0	0	multi-exon	FALSE	canonical	3	165	junction_3	659.193567929785	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATTCTTTGTAAACATAA	-6	True	NA	25	True	AATAAA	-22	NA	41332870	41381050	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_41333051_41342385_41342455_41349097_41349242_41350990_41351130_41356038_41356141_41358148_41358259_41365404_41365590_41371526_41371685_41375711_41375829_41377195_41377305_41380092
H1_mix_00027598	chr15	+	2409	11	FSM	ENSG00000137804.14	ENST00000260359.10	2409	11	0	0	0	0	multi-exon	FALSE	canonical	3	645	junction_3	553.838324784409	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATTCTTTGTAAACATAA	NA	False	NA	25	True	AATAAA	-22	NA	41332693	41381050	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_41333051_41342385_41342455_41349097_41349242_41351032_41351130_41356038_41356141_41358148_41358259_41365401_41365590_41371526_41371685_41375711_41375829_41377195_41377305_41380092
H1_mix_00027599	chr15	+	2222	11	NIC	ENSG00000137804.14	novel	2409	11	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	645	junction_3	541.342183835696	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGATTCATTCTTTGTAA	-5	True	NA	19	True	AATAAA	-16	NA	41332871	41381044	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_41333051_41342385_41342455_41349097_41349242_41351032_41351130_41356038_41356141_41358148_41358259_41365404_41365590_41371526_41371685_41375711_41375829_41377195_41377305_41380092
H1_mix_00027600	chr15	+	2128	10	NIC	ENSG00000137804.14	novel	2263	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	157	junction_8	714.178903477861	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATTCATTCTTTGTAAAC	22	False	NA	21	True	AATAAA	-18	NA	41332898	41381046	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_41333051_41342385_41342455_41349097_41349242_41350987_41351130_41356038_41356141_41358148_41358259_41365401_41365590_41371526_41371685_41377195_41377305_41380092
H1_mix_00027601	chr15	+	2246	11	FSM	ENSG00000137804.14	ENST00000560177.5	2232	11	-14	0	0	0	multi-exon	FALSE	canonical	3	165	junction_3	668.855208546663	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATTCTTTGTAAACATAA	22	False	NA	25	True	AATAAA	-22	NA	41332898	41381050	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_41333051_41342385_41342455_41349097_41349242_41350990_41351130_41356038_41356141_41358148_41358259_41365401_41365590_41371526_41371685_41375711_41375829_41377195_41377305_41380092
H1_mix_00027612	chr15	+	15304	24	NIC	ENSG00000174197.18	novel	12046	24	NA	NA	12	-18	intron_retention	TRUE	canonical	3	18	junction_2	19.2664139630168	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGTATTTTCTGTTTCATA	-17	True	NA	NA	False	AATAAA	-8	NA	41660416	41773063	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_41660526_41668827_41669959_41696074_41697024_41698862_41698942_41699063_41699160_41707727_41707860_41708103_41708209_41710690_41711350_41713150_41713497_41727179_41727407_41729163_41729350_41734521_41734595_41736180_41736699_41739905_41740204_41742545_41743173_41748636_41748928_41749110_41750616_41754436_41754568_41757787_41757840_41760322_41760530_41761738_41761851_41762128_41762363_41764885_41765063_41766003
H1_mix_00027615	chr15	+	1418	8	FSM	ENSG00000243789.11	ENST00000397299.9	1409	8	-9	0	-9	0	multi-exon	FALSE	canonical	3	115	junction_2	19.8484050662382	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTATGTCCTTTTTTTTT	NA	False	NA	13	True	AATAAA	-13	NA	41828082	41837581	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_41828189_41834739_41834894_41834969_41835224_41835587_41835645_41836147_41836244_41836474_41836552_41836780_41836941_41837067
H1_mix_00027616	chr15	+	6691	27	NIC	ENSG00000168970.22	novel	7218	25	NA	NA	6	-3	intron_retention	FALSE	canonical	3	30	junction_16	39.8120027395028	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGAGGCGCTGAGACC	-9	True	NA	17	True	NA	NA	NA	41828100	41848140	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_41828189_41834739_41834894_41834969_41835224_41835587_41835645_41836147_41836244_41836474_41836552_41836780_41836941_41837067_41840231_41840523_41840661_41840773_41840906_41841054_41841096_41841230_41841274_41841516_41841572_41841818_41841950_41842192_41842277_41842553_41842592_41843125_41843224_41843675_41843812_41844470_41844608_41844847_41845071_41845202_41845321_41845637_41845776_41845942_41846048_41846202_41846383_41846668_41846836_41847336_41847524_41847648
H1_mix_00027617	chr15	+	3350	25	FSM	ENSG00000168970.22	ENST00000382448.8	3331	25	-19	0	2	0	multi-exon	FALSE	canonical	2	11	junction_6	38.2573295446623	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGGCGCTGAGACCATC	-13	True	NA	20	True	NA	NA	NA	41828096	41848143	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_41828189_41834739_41834894_41834969_41835224_41835587_41835645_41836147_41836244_41836474_41836552_41840157_41840231_41840523_41840661_41840773_41840906_41841054_41841096_41841230_41841274_41841516_41841572_41841818_41841950_41842192_41842277_41842553_41842592_41843675_41843812_41844470_41844608_41844847_41845071_41845202_41845321_41845637_41845776_41845942_41846048_41846202_41846383_41846668_41846836_41847336_41847524_41847648
H1_mix_00027618	chr15	+	7225	25	FSM	ENSG00000168970.22	ENST00000490848.5	7218	25	-12	5	-12	-5	multi-exon	TRUE	canonical	3	30	junction_14	39.33083943365	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTGAGACCATCTGTTATT	NA	False	NA	27	True	NA	NA	NA	41828082	41848150	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_41828189_41834739_41834894_41834969_41835224_41835587_41835645_41836147_41836244_41836474_41836941_41837067_41840231_41840523_41840661_41840773_41840906_41841054_41841096_41841230_41841274_41841516_41841572_41841818_41841950_41842192_41842592_41843125_41843224_41843675_41843812_41844470_41844608_41844847_41845071_41845202_41845321_41845637_41845776_41845942_41846048_41846202_41846383_41846668_41846836_41847336_41847524_41847648
H1_mix_00027622	chr15	+	1061	6	FSM	ENSG00000214013.10	ENST00000562859.5	1052	6	-9	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	9.20869154657707	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGACTTGGTGTCTGAAGAA	14	False	NA	NA	False	NA	NA	NA	42273285	42292826	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_42273612_42274167_42274511_42276347_42276411_42278481_42278591_42287690_42287819_42292734
H1_mix_00027623	chr15	+	7777	24	FSM	ENSG00000214013.10	ENST00000318010.13	5553	24	1041	-3265	0	3265	multi-exon	FALSE	canonical	3	11	junction_15	7.98344222227769	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCATCTGAGAGAATGTT	10	True	NA	0	True	AATAAA	-16	NA	42274241	42356931	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_42274511_42276347_42276411_42278481_42278591_42287690_42287819_42292734_42292918_42297610_42297657_42306545_42306613_42308221_42308319_42310282_42310464_42310692_42310847_42321784_42322021_42326297_42326425_42327362_42327443_42329305_42329450_42330575_42330673_42338388_42338491_42339668_42339913_42340689_42340755_42343077_42343155_42345757_42345833_42348102_42348217_42349382_42349496_42351328_42351433_42352029
H1_mix_00027624	chr15	+	1437	5	FSM	ENSG00000214013.10	ENST00000440615.6	1437	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	14.517231140958	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCATTAAAAAAACTAGATTT	10	True	NA	105	True	NA	NA	NA	42274241	42284389	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_42274511_42276347_42276411_42278481_42278591_42280916_42281134_42283610
H1_mix_00027625	chr15	+	1524	12	FSM	ENSG00000214013.10	ENST00000567421.1	1526	12	2	0	2	0	multi-exon	FALSE	canonical	3	17	junction_5	6.6915513525738	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAAAGTGATTGAATAAA	1901	False	NA	NA	False	NA	NA	NA	42276347	42327495	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_42276411_42278481_42278591_42287690_42287819_42292734_42292918_42297610_42297657_42306545_42306613_42308221_42308319_42310282_42310464_42310692_42310847_42321784_42322021_42326297_42326425_42327362
H1_mix_00027627	chr15	+	2205	7	FSM	ENSG00000092531.10	ENST00000349777.5	2480	7	275	0	-53	0	multi-exon	TRUE	canonical	3	23	junction_5	248.876586997563	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGTATTGTTCTTTCAAA	320	False	NA	19	True	ATTAAA	-15	NA	42495580	42533059	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_42495714_42511832_42511904_42512954_42512997_42513398_42513448_42515236_42515355_42529674_42529820_42531412
H1_mix_00027628	chr15	+	368	3	FSM	ENSG00000092531.10	ENST00000563873.5	368	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	332	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTTGACTATTTGTTCT	NA	False	NA	9	True	ATTAAA	-15	NA	42513409	42545347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_42513448_42515236_42515355_42545135
H1_mix_00027630	chr15	+	3872	5	FSM	ENSG00000137814.12	ENST00000568876.5	1702	5	-34	-2136	-34	0	multi-exon	FALSE	canonical	3	47	junction_1	55.0022726803175	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAGTCCTAGTCTGAA	445	False	NA	81	True	AATAAA	-21	NA	42548793	42569994	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_42548966_42559338_42559409_42561269_42561403_42563748_42563858_42566606
H1_mix_00027635	chr15	+	1634	12	FSM	ENSG00000166946.14	ENST00000566515.5	1634	12	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_10	96.6299920930392	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTCAATAAAATGCTAACT	36	False	NA	NA	False	AGTAAA	-32	NA	43185327	43195164	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43185608_43185819_43185880_43186153_43186234_43189198_43189281_43190054_43190152_43190324_43190399_43190965_43191043_43191394_43191676_43192742_43192804_43194080_43194138_43194414_43194462_43194726
H1_mix_00027636	chr15	+	1593	11	FSM	ENSG00000166946.14	ENST00000300213.9	3515	11	-75	1997	0	0	multi-exon	FALSE	canonical	3	211	junction_9	22.284748147556	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTGCCAGTGATTAAATG	36	False	NA	NA	False	AATAAA	-6	NA	43185327	43195180	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43185608_43185819_43185880_43186153_43186234_43189198_43189281_43190054_43190152_43190324_43190399_43190965_43191043_43191394_43191676_43192742_43192804_43194414_43194462_43194726
H1_mix_00027637	chr15	+	1385	10	FSM	ENSG00000166946.14	ENST00000568507.5	1385	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	76.6710143694763	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTGCCAGTGATTAAATG	18	True	NA	NA	False	AATAAA	-6	NA	43185438	43195180	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43185608_43185819_43185880_43186153_43186234_43189198_43189281_43190324_43190399_43190965_43191043_43191394_43191676_43192742_43192804_43194414_43194462_43194726
H1_mix_00027640	chr15	+	1727	11	ISM	ENSG00000168803.16	ENST00000562188.7	4268	13	-9	5154	-9	3	5prime_fragment	TRUE	canonical	3	45	junction_6	3.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTCACATGTCTGTTGA	-22	True	NA	6	True	ATTAAA	-19	NA	43330662	43349415	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_43330860_43331899_43332001_43333310_43333435_43334944_43335171_43335695_43335827_43336625_43336687_43340264_43340353_43342993_43343076_43345853_43345981_43347015_43347097_43348906
H1_mix_00027641	chr15	+	1559	10	FSM	ENSG00000168803.16	ENST00000389651.8	1559	10	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	14.6599311133072	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATATTTTCACATGTCTGT	42	False	NA	3	True	ATTAAA	-16	NA	43330726	43349412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43330860_43333310_43333435_43334944_43335171_43335695_43335827_43336625_43336687_43340264_43340353_43342993_43343076_43345853_43345981_43347015_43347097_43348906
H1_mix_00027643	chr15	+	6829	18	FSM	ENSG00000137822.13	ENST00000564079.6	6812	18	-17	0	11	0	multi-exon	TRUE	canonical	3	61	junction_12	7.21206217599723	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGAGTGGTTTTCTTAT	-1	True	NA	NA	False	ATTAAA	-21	NA	43371083	43409771	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43371433_43376097_43376227_43376502_43376626_43377013_43377068_43377846_43377904_43380083_43380164_43383302_43383505_43385790_43385957_43386205_43386331_43395106_43395158_43395582_43395689_43397213_43397322_43398040_43398180_43400043_43400222_43401715_43401851_43403682_43403800_43404412_43404553_43405201
H1_mix_00027644	chr15	+	6540	18	FSM	ENSG00000137822.13	ENST00000260383.11	2617	18	275	-4198	275	0	multi-exon	FALSE	canonical	3	24	junction_12	13.8128870172338	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGAGTGGTTTTCTTAT	142	False	NA	NA	False	ATTAAA	-21	NA	43371375	43409771	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43371433_43376097_43376227_43376502_43376626_43377013_43377068_43377846_43377904_43380083_43380164_43383302_43383505_43385790_43385957_43386205_43386331_43395106_43395158_43395582_43395689_43397213_43397322_43398037_43398180_43400043_43400222_43401715_43401851_43403682_43403800_43404412_43404553_43405201
H1_mix_00027645	chr15	+	2941	7	FSM	ENSG00000137822.13	ENST00000563963.1	4379	7	1438	0	1438	0	multi-exon	FALSE	canonical	3	61	junction_2	7.8049129826454	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGACTCTACCTTTTCTCC	NA	False	NA	9	True	AATAAA	-18	NA	43395518	43405323	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43395689_43397213_43397322_43398040_43398180_43400043_43400222_43401715_43403800_43404412_43404553_43405201
H1_mix_00027646	chr15	+	1972	10	FSM	ENSG00000237289.10	ENST00000300283.10	1779	10	-193	0	-193	0	multi-exon	FALSE	canonical	3	24	junction_1	47.0885690304275	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTGTGTTACTTCTAA	NA	False	NA	20	True	AGTAAA	-20	NA	43592860	43599406	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43593272_43594044_43594368_43594971_43595171_43595373_43595470_43595855_43596078_43596206_43596293_43596407_43596532_43598192_43598328_43598826_43598953_43599156
H1_mix_00027648	chr15	+	1587	9	FSM	ENSG00000237289.10	ENST00000441322.6	1579	9	-8	0	0	0	multi-exon	FALSE	canonical	3	136	junction_8	16.1844833096395	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTGTGTTACTTCTAA	919	False	NA	20	True	AGTAAA	-20	NA	43594018	43599406	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43594368_43594971_43595171_43595373_43595470_43595855_43596078_43596206_43596293_43596407_43596532_43598192_43598328_43598826_43598953_43599156
H1_mix_00027650	chr15	+	1915	10	FSM	ENSG00000223572.10	ENST00000434505.5	1779	10	-136	0	-136	0	multi-exon	FALSE	canonical	3	25	junction_1	46.2649375277266	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTGTGTTACTTCTAA	NA	False	NA	17	True	AGTAAA	-20	NA	43692749	43699222	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43693104_43693876_43694200_43694803_43695003_43695205_43695302_43695687_43695910_43696038_43696125_43696239_43696364_43698013_43698149_43698640_43698767_43698972
H1_mix_00027651	chr15	+	1689	10	NIC	ENSG00000223572.10	novel	1779	10	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_1	49.6844362942415	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTGTGTTACTTCTAA	13	False	NA	17	True	AGTAAA	-20	NA	43692912	43699222	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_43693104_43693939_43694200_43694803_43695003_43695205_43695302_43695687_43695910_43696038_43696125_43696239_43696364_43698013_43698149_43698640_43698767_43698972
H1_mix_00027654	chr15	+	3680	13	FSM	ENSG00000167004.14	ENST00000300289.10	3680	13	0	0	0	0	multi-exon	TRUE	canonical	3	7091	junction_4	378.359910960744	759	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGTTCCCAGACCTTGT	9	True	NA	8	True	AGTAAA	-19	NA	43746437	43773278	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43746707_43753823_43753903_43756648_43756767_43761423_43761532_43763076_43763207_43765449_43765567_43765886_43766013_43766727_43766911_43768488_43768598_43769517_43769647_43770249_43770330_43770522_43770581_43771104
H1_mix_00027655	chr15	+	1040	2	FSM	ENSG00000140264.21	ENST00000486144.1	1030	2	-10	0	0	0	multi-exon	FALSE	canonical	3	8075	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGCCACTCCCGGGGGT	-16	True	NA	-26	True	NA	NA	NA	43792319	43793950	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43792384_43792974
H1_mix_00027656	chr15	+	1042	3	FSM	ENSG00000140264.21	ENST00000409960.6	1032	3	-10	0	0	0	multi-exon	FALSE	canonical	3	538	junction_2	3768.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGTTCACTTTCTCTTCTG	-16	True	NA	NA	False	NA	NA	NA	43792319	43794444	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43792384_43792974_43793084_43793575
H1_mix_00027657	chr15	+	2116	4	FSM	ENSG00000140264.21	ENST00000445816.5	2099	4	-17	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	4551.9639961474	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATGTGTGTGTGTCTTTGT	-16	True	NA	37	True	NA	NA	NA	43792319	43796089	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43792384_43792974_43793084_43793709_43793937_43794373
H1_mix_00027658	chr15	+	2750	3	FSM	ENSG00000242028.8_ENSG00000140264.21	ENST00000249786.9	2543	3	0	-207	0	197	multi-exon	FALSE	canonical	3	8075	junction_1	1315.5	689	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTACCAATTGGTCCATAC	-16	True	NA	NA	False	AATAGA	-45	NA	43792319	43796286	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43792384_43792974_43793084_43793709
H1_mix_00027660	chr15	+	607	3	FSM	ENSG00000140264.21	ENST00000402131.5	586	3	-21	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	5333.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTACCCCTTCCCAGTGTT	11	True	NA	-1	True	NA	NA	NA	43792346	43793975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43792579_43792974_43793084_43793709
H1_mix_00027661	chr15	+	506	3	FSM	ENSG00000140264.21	ENST00000339624.9	506	3	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_2	3881.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGCGCCTGGTTTGACT	11	True	NA	28	True	ATTAAA	-17	NA	43792346	43794046	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43792384_43792974_43793084_43793686
H1_mix_00027662	chr15	+	711	3	FSM	ENSG00000140264.21	ENST00000403425.5	690	3	-21	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	5328.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGCGCCTGGTTTGACT	11	True	NA	28	True	ATTAAA	-17	NA	43792346	43794046	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43792612_43792974_43793084_43793709
H1_mix_00027664	chr15	+	3261	6	FSM	ENSG00000140264.21	ENST00000409617.6	3254	6	-7	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	2593.45406745522	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGCTAGTACCTGAGCT	11	True	NA	NA	False	AATAAA	-18	NA	43792346	43804427	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43792384_43792974_43793084_43800494_43800785_43801131_43801188_43801517_43801570_43801710
H1_mix_00027665	chr15	+	582	2	FSM	ENSG00000140264.21	ENST00000409614.1	582	2	0	0	0	0	multi-exon	FALSE	canonical	3	10706	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGCGCCTGGTTTGACT	503	False	NA	28	True	ATTAAA	-17	NA	43792838	43794046	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43793084_43793709
H1_mix_00027668	chr15	+	2594	13	FSM	ENSG00000092470.12	ENST00000381246.6	2586	13	-8	0	-8	0	multi-exon	FALSE	canonical	2	10	junction_1	38.4587621861246	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTTTGATTCTATAGTA	-23	True	NA	30	True	ATTAAA	-20	NA	43826971	43867018	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43827119_43827964_43828367_43835060_43835151_43836160_43836217_43839604_43839729_43842414_43842517_43842627_43842672_43843900_43844055_43851086_43851246_43856945_43857164_43858670_43858824_43861332_43861387_43866127
H1_mix_00027672	chr15	+	742	5	FSM	ENSG00000137770.14	ENST00000561189.1	742	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	180.203357349412	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGGAGCTACTTGTAAAA	NA	False	NA	NA	False	NA	NA	NA	44490991	44503879	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_44491000_44496379_44496459_44497026_44497139_44499726_44499814_44503423
H1_mix_00027673	chr15	+	3609	2	FSM	ENSG00000137770.14	ENST00000559175.1	3609	2	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATAATCATGGCAGA	NA	False	NA	-36	True	NA	NA	NA	44519636	44525947	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_44521407_44524108
H1_mix_00027674	chr15	+	1550	6	FSM	ENSG00000104131.13	ENST00000424492.7	1550	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	230.825821779107	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGTAAATTGTTATGTT	15	True	NA	38	True	TATAAA	-33	NA	44537124	44561999	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_44537238_44537323_44537428_44554552_44554668_44557488_44557651_44560248_44560323_44561017
H1_mix_00027679	chr15	+	1520	1	FSM	ENSG00000166710.22	ENST00000632133.1	2403	1	-1348	2231	-58	-2231	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGCACTCCAGCGTGGG	1029	False	NA	NA	False	NA	NA	NA	44711428	44712948	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_44711400_44712900
H1_mix_00027680	chr15	+	947	4	FSM	ENSG00000166710.22	ENST00000648006.3	943	4	-4	0	0	0	multi-exon	FALSE	canonical	3	2439	junction_2	62.8242699033494	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTATCTCTTATATCTC	-4	True	NA	14	True	AATAAA	-14	NA	44711512	44718145	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_44711614_44715422_44715702_44716328_44716357_44717606
H1_mix_00027689	chr15	+	3982	4	FSM	ENSG00000104164.12	ENST00000568597.5	592	4	-284	-3106	-122	3	multi-exon	FALSE	canonical	3	8	junction_2	55.7275116576683	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGTCATTTATCAAGCAT	NA	False	NA	17	True	AATAAA	-20	NA	45587091	45609713	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_45587526_45592134_45592277_45605427_45605515_45606394
H1_mix_00027697	chr15	+	769	7	FSM	ENSG00000128951.14	ENST00000558813.5	769	7	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	747.175440501686	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGTTTTTCCGCAATTG	-32	True	NA	-84	True	ATTAAA	-45	NA	48331404	48342293	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_48331480_48332267_48332407_48334416_48334509_48336045_48336091_48341288_48341364_48341514_48341586_48342021
H1_mix_00027698	chr15	+	2165	7	FSM	ENSG00000128951.14	ENST00000331200.8	2141	7	-24	0	0	0	multi-exon	FALSE	canonical	3	229	junction_1	684.17868442551	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAATGAATTCTGTTTTG	-32	True	NA	NA	False	AATAAA	-27	NA	48331404	48343373	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_48331796_48332267_48332407_48334416_48334509_48336045_48336091_48341288_48341364_48341514_48341586_48342021
H1_mix_00027699	chr15	+	1935	6	FSM	ENSG00000128951.14	ENST00000455976.6	1935	6	0	0	0	0	multi-exon	FALSE	canonical	3	1864	junction_5	185.699326870078	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAACCAGAATGAATTCTGT	666	False	NA	NA	False	AATAAA	-23	NA	48332102	48343369	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_48332407_48334416_48334509_48336045_48336091_48341288_48341364_48341514_48341586_48342021
H1_mix_00027700	chr15	+	3196	3	FSM	ENSG00000128951.14	ENST00000559852.1	340	3	-1549	-1307	-1549	0	multi-exon	FALSE	canonical	3	1864	junction_2	2.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAACCAGAATGAATTCTGT	7396	False	NA	NA	False	AATAAA	-23	NA	48339586	48343369	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_48341364_48341514_48341586_48342021
H1_mix_00027703	chr15	+	873	7	FSM	ENSG00000156958.15	ENST00000559883.5	991	7	118	0	-1	0	multi-exon	FALSE	canonical	3	12	junction_1	32.503418623619	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGCAGAAGAAGGAACTGT	-21	True	NA	NA	False	NA	NA	NA	49155773	49282067	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_49156017_49161763_49161862_49201161_49201251_49217189_49217314_49235850_49235942_49239220_49239368_49281986
H1_mix_00027705	chr15	+	1781	11	NIC	ENSG00000156958.15	novel	5299	10	NA	NA	3	-229	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	27.7064974329127	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATCAAGATATATTTTCA	2	True	NA	NA	False	AGTAAA	-43	NA	49155796	49328274	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_49156017_49161739_49161862_49201161_49201251_49217189_49217314_49235850_49235942_49239220_49239368_49281986_49282086_49283565_49283719_49292326_49292538_49319603_49319806_49327951
H1_mix_00027706	chr15	+	5176	10	FSM	ENSG00000156958.15	ENST00000560031.6	5176	10	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	14.6599311133072	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATTGTCCTTATATTGAC	-18	True	NA	6	True	AATAAA	-18	NA	49170246	49331882	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_49170376_49201161_49201251_49217189_49217314_49235850_49235942_49239220_49239368_49281986_49282086_49283565_49283719_49292326_49292538_49319603_49319806_49327951
H1_mix_00027709	chr15	+	319	1	FSM	ENSG00000276593.1	ENST00000619930.1	550	1	45	186	45	-186	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCATATGTTAATTAAGT	NA	False	NA	NA	False	TTTAAA	-24	NA	49353529	49353848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_49353500_49353800
H1_mix_00027711	chr15	+	1151	5	FSM	ENSG00000104047.15	ENST00000558653.5	1131	5	-20	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	137.932954728013	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTAACATTAATAAACTTAT	-7	True	NA	-16	True	NA	NA	NA	49621044	49643610	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_49621194_49625112_49625432_49632158_49632303_49634535_49634795_49643330
H1_mix_00027713	chr15	+	2397	10	FSM	ENSG00000140284.11	ENST00000267842.10	2384	10	-13	0	-13	0	multi-exon	TRUE	canonical	3	21	junction_1	6.8168274000791	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCACTGTCTCTGTGTT	NA	False	NA	10	True	ATTAAA	-18	NA	50182182	50236385	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_50182906_50197499_50197710_50202486_50202646_50205238_50205364_50222964_50223160_50225987_50226079_50226979_50227179_50228944_50229043_50233867_50233999_50235919
H1_mix_00027716	chr15	+	16020	2	FSM	ENSG00000244879.9	ENST00000499624.3	16182	2	-7	169	0	-125	multi-exon	FALSE	canonical	3	42	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCATAAGGAAGCCATGGAA	-18	True	NA	NA	False	NA	NA	NA	50355459	50372033	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_50355546_50356099
H1_mix_00027717	chr15	+	1194	2	FSM	ENSG00000244879.9	ENST00000668321.1	1098	2	-96	0	36	0	multi-exon	FALSE	canonical	3	10	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGACTCCACTTATGCA	91	False	NA	16	True	ATTAAA	-19	NA	50355363	50371343	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_50355546_50370331
H1_mix_00027718	chr15	+	5949	2	NNC	ENSG00000244879.9	novel	16182	2	NA	NA	7974	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGACTCCACTTATGCA	8967	False	NA	16	True	ATTAAA	-19	NA	50364444	50371343	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_50369382_50370331
H1_mix_00027723	chr15	+	18134	20	FSM	ENSG00000138592.14	ENST00000396444.7	19026	20	-15	907	-13	-907	multi-exon	FALSE	canonical	3	74	junction_1	62.7604159171542	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTGTCTAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	50424366	50513512	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_50424655_50439008_50439178_50441348_50441494_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480_50482066_50484274_50484362_50489800_50489882_50490262_50490526_50492700_50492914_50494069_50494281_50495847_50496085_50497088_50497232_50498595_50498729_50498902
H1_mix_00027724	chr15	+	5587	19	NIC	ENSG00000138592.14	novel	19026	20	NA	NA	-2	1393	intron_retention	FALSE	canonical	3	74	junction_1	67.5048466481308	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATGTTTATCAGTGAACA	-1	True	NA	20	True	AATAAA	-27	NA	50424402	50501088	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_50424655_50439008_50439178_50441348_50441494_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480_50482066_50489800_50489882_50490262_50490526_50492700_50492914_50494069_50494281_50495847_50496085_50497088_50497232_50498595_50498729_50498902
H1_mix_00027725	chr15	+	6261	21	NIC	ENSG00000138592.14	novel	18865	20	NA	NA	1	1943	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	76.2039861162131	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAAAAATAATGTATCTC	-16	True	NA	NA	False	GGGGCT	-33	NA	50424387	50501638	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_50424515_50432337_50432500_50439008_50439178_50441348_50441494_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480_50482066_50484274_50484362_50489800_50489882_50490262_50490526_50492700_50492914_50494069_50494281_50495847_50496085_50497088_50497232_50498595_50498729_50498902
H1_mix_00027726	chr15	+	5585	20	NIC	ENSG00000138592.14	novel	18865	20	NA	NA	0	1393	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	80.7284013977966	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATGTTTATCAGTGAACA	23	True	NA	20	True	AATAAA	-27	NA	50424426	50501088	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_50424515_50432337_50432500_50439008_50439178_50441348_50441494_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480_50482066_50489800_50489882_50490262_50490526_50492700_50492914_50494069_50494281_50495847_50496085_50497088_50497232_50498595_50498729_50498902
H1_mix_00027731	chr15	+	3368	1	ISM	ENSG00000186417.14	ENST00000396399.6	4584	10	27376	4	27178	1	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATGTTGAAACAAGTGTG	NA	False	NA	4	True	AATAAA	-22	NA	51404633	51408001	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_51404600_51408000
H1_mix_00027732	chr15	+	3171	12	FSM	ENSG00000104112.9	ENST00000220478.8	3160	12	-11	0	0	0	multi-exon	FALSE	canonical	3	486	junction_6	36.5450022586214	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGGGTCCGTGCCATC	-5	True	NA	18	True	AATAAA	-16	NA	51681491	51721026	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_51681838_51682516_51682570_51683078_51683125_51683218_51683435_51688259_51688403_51689218_51689369_51692158_51692337_51695874_51695992_51699318_51699403_51701106_51701245_51713332_51713414_51719407
H1_mix_00027733	chr15	+	8253	10	FSM	ENSG00000138594.14	ENST00000308580.12	8232	10	-21	0	4	0	multi-exon	FALSE	canonical	3	280	junction_3	24.5633471801251	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGACTTTTTGAAAAAGC	1	True	NA	16	True	AATAAA	-22	NA	51829631	51915725	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_51829837_51862810_51863011_51869216_51869374_51887588_51887712_51889055_51889146_51893814_51893946_51896418_51896527_51900154_51900299_51901891_51902037_51908775
H1_mix_00027741	chr15	+	2317	9	FSM	ENSG00000151575.14	ENST00000561221.6	2297	9	-20	0	-1	0	multi-exon	FALSE	canonical	3	29	junction_6	10.256095748383	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCACTTAGACAAAATTTAT	-9	True	NA	NA	False	AATAAA	-14	NA	56365425	56396298	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_56365478_56365578_56365671_56373440_56373505_56383951_56384032_56388471_56388521_56389317_56389401_56391242_56391419_56394164_56394248_56394660
H1_mix_00027743	chr15	+	4441	8	FSM	ENSG00000151575.14	ENST00000558083.2	4440	8	-1	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	10.9414023650666	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTTCTTGCAGTGGCTA	11	True	NA	NA	False	ATTAAA	-21	NA	56365445	56398341	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_56365671_56373440_56373505_56383951_56384032_56388471_56388521_56389317_56389401_56391242_56391419_56394164_56394248_56394660
H1_mix_00027744	chr15	+	593	2	FSM	ENSG00000276524.1	ENST00000621974.1	596	2	0	3	0	-3	multi-exon	FALSE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTGTTTGTTCCAGGCT	NA	False	NA	NA	False	AATAAA	-12	NA	56887106	56888216	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_56887171_56887687
H1_mix_00027747	chr15	+	6133	21	FSM	ENSG00000140262.18	ENST00000333725.10	6114	21	-19	0	0	0	multi-exon	FALSE	canonical	3	117	junction_15	55.0103626601389	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCAGGATGATTCCTCTT	-52	True	NA	NA	False	AATAAA	-37	NA	56918624	57289853	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_56918907_56919891_56919989_56921025_56921099_57063749_57063824_57091788_57091892_57166401_57166467_57192157_57192294_57197772_57197826_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57252420_57252493_57253261_57253469_57262093_57262209_57263111_57263275_57273029_57273263_57282444_57282599_57286156
H1_mix_00027748	chr15	+	4786	22	NIC	ENSG00000140262.18	novel	6114	21	NA	NA	9	-3	combination_of_known_splicesites	FALSE	canonical	3	12	junction_5	94.9338712436033	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAACACAGTAAAATAGTG	7	True	NA	7	True	AATAAA	-15	NA	56918683	57288503	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_56918907_56919891_56919989_56921025_56921099_57063749_57063824_57072652_57072715_57091788_57091892_57166401_57166467_57192157_57192294_57197772_57197826_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57252420_57252493_57253261_57253469_57262093_57262209_57263111_57263275_57273029_57273263_57282444_57282599_57286156
H1_mix_00027761	chr15	+	2386	13	FSM	ENSG00000263155.6	ENST00000267853.10	2398	13	12	0	12	0	multi-exon	TRUE	canonical	2	5	junction_1	1.84842275106824	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTCTCTCTGTTTCATC	12	True	NA	7	True	AATAAA	-24	NA	57591915	57685364	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_57592110_57604268_57604356_57618032_57618189_57621607_57621701_57625778_57625893_57629701_57629855_57632433_57632560_57633612_57633742_57637694_57637775_57639439_57639546_57661449_57661534_57674967_57675069_57684401
H1_mix_00027765	chr15	+	4820	9	FSM	ENSG00000128923.11	ENST00000450403.3	4820	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	21.2893018908559	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	58	False	NA	NA	False	AATAGA	-16	NA	58771361	58857533	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_58772236_58787905_58787964_58802312_58802378_58810229_58810389_58821716_58821820_58831773_58831917_58847296_58847471_58851770_58851966_58854484
H1_mix_00027767	chr15	+	9250	9	FSM	ENSG00000128923.11	ENST00000559228.6	9250	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_8	11.7553179455087	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTTCGCTCTGTATATT	-2	True	NA	NA	False	AATAAA	-20	NA	58771301	58861900	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_58772236_58787905_58787964_58802312_58802378_58810229_58810389_58821716_58821820_58831773_58831917_58847296_58847471_58851770_58851966_58854481
H1_mix_00027773	chr15	+	4807	14	FSM	ENSG00000157450.16	ENST00000557998.5	4803	14	-4	0	-4	0	multi-exon	FALSE	canonical	3	12	junction_1	37.5461845775488	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTTCATAATTAGTT	428	False	NA	18	True	AATAAA	-21	NA	58988133	59096431	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_58988406_59030803_59031703_59052304_59052432_59055681_59055846_59058355_59058551_59066763_59067084_59075953_59076216_59080935_59081285_59084128_59084255_59085658_59085786_59089666_59089760_59091058_59091155_59092512_59092641_59094782
H1_mix_00027776	chr15	+	2503	8	FSM	ENSG00000157456.8	ENST00000621385.1	2503	8	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_3	48.7994647009784	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCATGTGTATTTATTTG	58	False	NA	17	True	AATAAA	-22	NA	59105268	59125044	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_59105293_59107321_59107451_59107556_59107671_59114443_59114615_59114717_59114877_59116689_59116927_59117227_59117369_59123516
H1_mix_00027780	chr15	+	952	1	FSM	ENSG00000259394.2	ENST00000560358.2	952	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCGGCTTCATCTCTACC	137	False	NA	NA	False	NA	NA	NA	62953172	62954124	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_62953200_62954100
H1_mix_00027782	chr15	+	3960	2	FSM	ENSG00000140416.23	ENST00000610733.1	3957	2	-3	0	0	0	multi-exon	FALSE	canonical	3	1643	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTAGCTATCATTTGAGTT	-3	True	NA	38	True	AAAACA	-20	NA	63042683	63047726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_63042944_63044026
H1_mix_00027783	chr15	+	1718	9	FSM	ENSG00000140416.23	ENST00000358278.7	1717	9	-1	0	0	0	multi-exon	FALSE	canonical	3	1461	junction_8	225.619390511986	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCACATTGTAGGACATTT	-3	True	NA	11	True	AATAAA	-1	NA	63042683	63071889	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575_63062646_63071089
H1_mix_00027784	chr15	+	1217	10	FSM	ENSG00000140416.23	ENST00000403994.9	1217	10	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_9	730.254597916218	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGTTAGTGTTTGGCTG	-2	True	NA	16	True	AATAAA	-24	NA	63042746	63066178	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061712_63061789_63062214_63062278_63062575_63062646_63064063_63064143_63065895
H1_mix_00027785	chr15	+	956	9	FSM	ENSG00000140416.23	ENST00000559397.6	933	9	-23	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	790.797767684634	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACATTCTTTCGTTTTGTT	-2	True	NA	NA	False	NA	NA	NA	63042746	63071190	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_63042944_63043705_63043832_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575_63062646_63071089
H1_mix_00027787	chr15	+	1123	10	NIC	ENSG00000140416.23	novel	1295	10	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	309	junction_9	623.886029477963	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTGCTATTCTTTT	7	True	NA	26	True	AATAAA	-15	NA	63042755	63066093	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575_63062646_63064063_63064143_63065895
H1_mix_00027788	chr15	+	1100	10	FSM	ENSG00000140416.23	ENST00000561266.6	1100	10	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	828.159419853061	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTGTTTGCTATTCTT	28	False	NA	24	True	AATAAA	-13	NA	63042776	63066091	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_63042944_63043705_63043832_63056984_63057119_63059562_63059681_63060868_63060940_63061712_63061789_63062214_63062278_63062575_63062646_63064063_63064143_63065895
H1_mix_00027789	chr15	+	1097	10	FSM	ENSG00000140416.23	ENST00000560970.6	1097	10	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_9	768.746020766576	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTGCTATTCTTTT	81	False	NA	26	True	AATAAA	-15	NA	63042829	63066093	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061712_63061789_63062214_63062278_63062575_63062646_63064063_63064191_63065895
H1_mix_00027790	chr15	+	943	8	FSM	ENSG00000140416.23	ENST00000404484.9	943	8	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_1	546.279550174428	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCACTGTCACAGAAACATC	-18	True	NA	NA	False	TTTAAA	-38	NA	63048470	63071263	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_63048708_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575_63062646_63071089
H1_mix_00027793	chr15	+	1911	6	FSM	ENSG00000103642.12	ENST00000261893.9	1911	6	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_5	22.8087702430447	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACTTTCTGCATGTGTAA	-1	True	NA	12	True	AATAAA	-17	NA	63121860	63142061	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_63122229_63122635_63122703_63126858_63127050_63127352_63127690_63129484_63129651_63141279
H1_mix_00027794	chr15	+	4923	8	FSM	ENSG00000166128.13	ENST00000321437.9	4800	8	-123	0	-77	0	multi-exon	FALSE	canonical	3	255	junction_6	37.4002073550947	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTAATGGCTCTCTGAAAT	NA	False	NA	16	True	AATAAA	-23	NA	63189482	63267776	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_63189749_63244755_63244817_63249644_63249706_63255506_63255585_63256504_63256595_63259626_63259693_63262691_63262743_63263526
H1_mix_00027795	chr15	+	5060	9	FSM	ENSG00000166128.13	ENST00000558119.5	774	9	-111	-4175	-77	78	multi-exon	FALSE	canonical	3	20	junction_4	124.432147674948	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCCCAGCACTTTGGG	NA	False	NA	94	True	TTTAAA	-42	NA	63189482	63267854	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_63189749_63244755_63244817_63249644_63249706_63251283_63251343_63255506_63255585_63256504_63256595_63259626_63259693_63262691_63262743_63263526
H1_mix_00027796	chr15	+	4207	6	FSM	ENSG00000138613.14	ENST00000261879.10	4138	6	-69	0	-69	0	multi-exon	FALSE	canonical	3	109	junction_4	10.590561835899	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTGTGTTTCCTGTTCT	-23	True	NA	20	True	AATAAA	-22	NA	63277535	63309126	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_63277737_63279160_63279332_63286557_63286629_63287423_63287547_63302344_63302473_63305613
H1_mix_00027798	chr15	+	2462	16	FSM	ENSG00000140455.17	ENST00000558157.5	2439	16	-23	0	0	0	multi-exon	TRUE	canonical	3	20	junction_1	31.7651101402501	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTGTCCTGCAAATACAA	-11	True	NA	-6	True	AATAAA	-17	NA	63504611	63591444	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_63504831_63529013_63529167_63532646_63532708_63537024_63537157_63553714_63553799_63556666_63556749_63558105_63558189_63559856_63559971_63562894_63563009_63570432_63570580_63574045_63574153_63574322_63574404_63588304_63588424_63588701_63588816_63588943_63589012_63590660
H1_mix_00027799	chr15	+	5494	16	FSM	ENSG00000140455.17	ENST00000559192.5	5499	16	0	5	0	2	multi-exon	FALSE	canonical	3	12	junction_2	34.4547368135194	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGACTTATTTCTGAACAC	13	False	NA	17	True	ATTAAA	-18	NA	63504733	63594635	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_63504831_63532646_63532708_63533802_63533919_63537024_63537157_63553714_63553799_63556666_63556749_63558105_63558189_63559856_63559971_63562894_63563009_63570432_63570580_63574045_63574153_63574322_63574404_63588304_63588424_63588701_63588816_63588943_63589012_63590660
H1_mix_00027801	chr15	+	3384	15	FSM	ENSG00000028528.15	ENST00000261889.9	3373	15	-11	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	147.900769961153	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTCCTCAGTTTGGATT	-11	True	NA	NA	False	AATACA	-14	NA	64095981	64139875	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_64096173_64112572_64112685_64118116_64118245_64118787_64118855_64123502_64123547_64126078_64126221_64127173_64127253_64127730_64127807_64129915_64130030_64130227_64130322_64131686_64131893_64134663_64134808_64136329_64136411_64136860_64136933_64138041
H1_mix_00027802	chr15	+	291	2	FSM	ENSG00000157734.14	ENST00000561334.1	2789	2	-5	2503	3	-2198	multi-exon	FALSE	canonical	1	1	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGCCACCCCCATTACTGC	8	True	NA	NA	False	NA	NA	NA	64151733	64152416	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_64151851_64152242
H1_mix_00027805	chr15	+	2013	13	FSM	ENSG00000103671.10	ENST00000261884.8	2013	13	0	0	0	0	multi-exon	TRUE	canonical	3	140	junction_7	11.4041902630373	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTTGACATTTTTCTTA	-11	True	NA	14	True	TATAAA	-21	NA	64387835	64455303	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_64387965_64393945_64394116_64395397_64395532_64397605_64397819_64400742_64400822_64406329_64406460_64409612_64409829_64414084_64414212_64418540_64418729_64424030_64424156_64425539_64425632_64445005_64445109_64454996
H1_mix_00027807	chr15	+	8745	9	ISM	ENSG00000180357.10	ENST00000326648.5	9006	10	38715	0	-3085	0	3prime_fragment	FALSE	canonical	3	19	junction_2	15.8936897855721	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTTAGTTTGCCTTT	NA	False	NA	50	True	AATAAA	-25	NA	64499292	64686068	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_64500167_64622826_64623053_64670345_64670434_64673915_64676257_64678115_64678483_64680184_64680361_64680645_64680863_64681308_64681388_64681691
H1_mix_00027808	chr15	+	369	1	FSM	ENSG00000243403.1	ENST00000483963.1	348	1	-21	0	-21	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGTGAGTTCTTAAAGAC	-1	True	NA	NA	False	NA	NA	NA	64592957	64593326	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_64593000_64593300
H1_mix_00027810	chr15	+	3569	5	FSM	ENSG00000241839.10	ENST00000616065.4	3569	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	36.8196618669971	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCAGTGCCTCAAGCCT	772	False	NA	14	True	AATAAA	-14	NA	64841882	64868000	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_64842029_64854920_64855038_64859893_64859999_64861476_64861576_64864898
H1_mix_00027812	chr15	+	1493	6	FSM	ENSG00000166839.17	ENST00000496660.5	1477	6	-16	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	13.7549990912395	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGGGTTGTGGCCTTTCTT	3	True	NA	13	True	AGTAAA	-24	NA	64911901	64932514	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_64911965_64921920_64922020_64926065_64926171_64926900_64927000_64930821_64930921_64931486
H1_mix_00027813	chr15	+	3079	13	FSM	ENSG00000166839.17	ENST00000620154.4	3079	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	9.04464236747676	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTCAAATCCAGTACTCA	5581	False	NA	NA	False	AATAAA	-20	NA	64921926	64958691	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_64922020_64926065_64926171_64926900_64927000_64930821_64930921_64931486_64931586_64934135_64934235_64942466_64942566_64943483_64943583_64944651_64944748_64947403_64947594_64949840_64949973_64950953_64951234_64957102
H1_mix_00027815	chr15	+	3228	11	FSM	ENSG00000074696.13	ENST00000261875.10	3228	11	0	0	0	0	multi-exon	TRUE	canonical	1	601	junction_6	426.511723168309	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAATGACTGTGCTTAAA	-39	True	NA	32	True	ATTAAA	-17	NA	65530462	65578349	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_65530719_65551675_65551719_65554886_65554961_65556738_65556904_65558679_65558732_65562773_65562885_65564214_65564343_65570090_65570204_65571547_65571655_65572234_65572367_65576302
H1_mix_00027816	chr15	+	1465	12	FSM	ENSG00000074696.13	ENST00000565299.5	1465	12	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	753.022548585158	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTTTTCCCCAGTAAC	-12	True	NA	39	True	ATTAAA	-16	NA	65530489	65576499	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_65530719_65535720_65535835_65551675_65551719_65554886_65554961_65556738_65556904_65558679_65558732_65562773_65562885_65564214_65564343_65570090_65570204_65571547_65571655_65572234_65572367_65576302
H1_mix_00027822	chr15	+	3659	17	NIC	ENSG00000166938.13	novel	3780	17	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_2	39.250796170269	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGTCTCCAATCAGTTCT	-7	True	NA	21	True	AATAAA	-18	NA	66293615	66333898	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_66293736_66294987_66295142_66306896_66306953_66308708_66308845_66311723_66311901_66314038_66314118_66315035_66315216_66318448_66318619_66320570_66320733_66322686_66322935_66323492_66323586_66325830_66326365_66328969_66329125_66329220_66329400_66331874_66332021_66332735_66332911_66333003
H1_mix_00027825	chr15	+	3256	19	FSM	ENSG00000174442.12	ENST00000446801.6	3256	19	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	114.020533671639	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTGTTGGCATTTCTTG	5517	False	NA	77	True	AATAAA	-24	NA	66505116	66549487	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_66505392_66508745_66508893_66513987_66514084_66515525_66515645_66518878_66519079_66520589_66520661_66521049_66521206_66523676_66523749_66527289_66527384_66527856_66527913_66528851_66528958_66529493_66529574_66532246_66532404_66532984_66533014_66535932_66536070_66537167_66537264_66540097_66540211_66546590_66546706_66548350
H1_mix_00027826	chr15	+	3595	19	FSM	ENSG00000174442.12	ENST00000307897.10	3595	19	0	0	0	0	multi-exon	FALSE	canonical	3	496	junction_15	54.2646691779067	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTCTTAGACTAATTTT	8	True	NA	9	True	AATAAA	-19	NA	66505325	66550130	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_66505392_66508840_66508893_66513987_66514084_66515525_66515645_66518878_66519079_66520589_66520661_66521049_66521206_66523676_66523749_66527289_66527384_66527856_66527913_66528851_66528958_66529493_66529574_66532246_66532404_66532984_66533014_66535932_66536070_66537167_66537264_66540097_66540211_66546590_66546706_66548350
H1_mix_00027828	chr15	+	3930	4	FSM	ENSG00000137834.15	ENST00000288840.10	3828	4	-100	-2	-100	2	multi-exon	FALSE	canonical	3	141	junction_1	43.5226633171986	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCTTAAAATAACTAACATT	NA	False	NA	10	True	AATAAA	-18	NA	66702135	66782851	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_66704076_66711667_66711725_66716420_66716499_66780996
H1_mix_00027831	chr15	+	1586	2	FSM	ENSG00000166949.17	ENST00000558763.1	1957	2	371	0	371	0	multi-exon	FALSE	canonical	3	68	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTTGGTTTATATATT	NA	False	NA	16	True	ATTAAA	-24	NA	67187032	67191521	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_67187510_67190412
H1_mix_00027833	chr15	+	1636	2	FSM	ENSG00000189227.6	ENST00000342683.6	4193	2	6	2551	6	954	multi-exon	FALSE	canonical	3	150	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTTAATGTGTTGC	7	True	NA	NA	False	NA	NA	NA	67521136	67527595	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_67521595_67526417
H1_mix_00027835	chr15	+	1689	21	FSM	ENSG00000137764.20	ENST00000395476.6	1689	21	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_16	16.9123475602886	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCATAAGAGTTGTGTG	131	False	NA	23	True	AATAAA	-24	NA	67543330	67807117	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_67543471_67550033_67550083_67563282_67563351_67580753_67580824_67585889_67585931_67586845_67586914_67592925_67592975_67600684_67600750_67630887_67630928_67646230_67646300_67646387_67646470_67658552_67658615_67664596_67664646_67692478_67692553_67693517_67693569_67703336_67703409_67748230_67748258_67748568_67748602_67769601_67769664_67772706_67772753_67806645
H1_mix_00027836	chr15	+	429	8	FSM	ENSG00000137764.20	ENST00000439036.5	429	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	27.3480962289323	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTGATGAATTGCCGTA	NA	False	NA	NA	False	AATAAA	-18	NA	67563299	67641489	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_67563351_67580753_67580824_67585889_67585931_67586845_67586914_67592925_67592975_67600684_67600750_67630887_67630928_67641444
H1_mix_00027838	chr15	+	8736	15	NIC	ENSG00000033800.14	novel	7980	14	NA	NA	10	0	intron_retention	FALSE	canonical	0	0	junction_14	51.719612985278	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTATGTGTTCTCATTGT	10	False	NA	NA	False	CATAAA	-22	NA	68054327	68198603	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_68054351_68086305_68086751_68141945_68142031_68142289_68142338_68145815_68145907_68146565_68146701_68153589_68153696_68164730_68164805_68173731_68173893_68175636_68175768_68176473_68176655_68181211_68181355_68183629_68183668_68187541_68193646_68197632
H1_mix_00027842	chr15	+	5044	5	FSM	ENSG00000138604.10	ENST00000261858.7	5044	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	10.6183802907977	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACCTGGATATTTCTCTT	0	True	NA	NA	False	AATAAA	-20	NA	69160634	69272207	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_69160758_69210315_69210407_69255793_69256393_69261086_69261330_69268219
H1_mix_00027843	chr15	+	1162	2	NIC	ENSG00000138604.10	novel	1308	3	NA	NA	4	-52	combination_of_known_splicesites	FALSE	canonical	3	76	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGATTGTAATGTTTC	9	True	NA	27	True	AATAAA	-26	NA	69160587	69197406	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_69160758_69196414
H1_mix_00027844	chr15	+	5046	2	FSM	ENSG00000138604.10	ENST00000559500.1	1085	2	-424	-3537	-424	0	multi-exon	FALSE	canonical	3	45	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACCTGGATATTTCTCTT	NA	False	NA	NA	False	AATAAA	-20	NA	69260271	69272207	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_69261330_69268219
H1_mix_00027849	chr15	+	3723	23	FSM	ENSG00000137807.16	ENST00000260363.9	3723	23	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_17	65.6677084561681	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGTGTGATGGCTGTTC	NA	False	NA	NA	False	ATTAAA	-23	NA	69414245	69448427	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_69414477_69415993_69416064_69417382_69417512_69421646_69421753_69421991_69422129_69422325_69422436_69423158_69423330_69426069_69426183_69426335_69426458_69429110_69429214_69435482_69435563_69435651_69435772_69436137_69436262_69436563_69436723_69438247_69438406_69439903_69440078_69440307_69440488_69440767_69441080_69444789_69445042_69446008_69446092_69446282_69446365_69446870_69446942_69447791
H1_mix_00027850	chr15	+	3660	24	FSM	ENSG00000137807.16	ENST00000679126.1	3660	24	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_7	103.833333080476	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTTGTGTGATGGCTGT	11	True	NA	NA	False	ATTAAA	-21	NA	69414348	69448425	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_69414477_69415993_69416064_69417382_69417512_69421646_69421753_69421991_69422129_69422325_69422436_69423158_69423330_69425281_69425324_69426069_69426183_69426335_69426458_69429110_69429214_69435482_69435563_69435651_69435772_69436137_69436262_69436563_69436723_69438247_69438406_69439903_69440078_69440307_69440488_69440767_69441080_69444789_69445042_69446008_69446092_69446282_69446365_69446870_69446942_69447791
H1_mix_00027851	chr15	+	3348	23	NIC	ENSG00000137807.16	novel	3660	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_7	101.08040331283	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTTGTGTGATGGCTGT	11	True	NA	NA	False	ATTAAA	-21	NA	69414348	69448425	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_69414477_69415993_69416064_69417382_69417512_69421646_69421753_69421991_69422129_69422325_69422436_69423158_69423330_69425281_69425324_69426069_69426183_69426335_69426458_69429110_69429214_69435482_69435563_69435651_69435772_69436137_69436262_69436563_69436723_69438247_69438406_69439903_69440078_69440307_69440488_69444789_69445042_69446008_69446092_69446282_69446365_69446870_69446942_69447791
H1_mix_00027856	chr15	+	1103	3	FSM	ENSG00000137818.12	ENST00000357790.5	445	3	0	-658	0	0	multi-exon	FALSE	canonical	3	1029	junction_1	9844	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACATGCCAGGCACATGAA	-8	True	NA	78	True	AATAAA	-31	NA	69452813	69456205	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_69453021_69455169_69455288_69455427
H1_mix_00027857	chr15	+	1968	3	FSM	ENSG00000137818.12	ENST00000487304.6	1962	3	-5	-1	0	0	multi-exon	FALSE	canonical	3	20717	junction_2	1435.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTGGTCTTGTCCATA	-8	True	NA	51	True	AATAAA	-15	NA	69452813	69455547	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_69453021_69453646_69455288_69455427
H1_mix_00027858	chr15	+	546	5	NNC	ENSG00000137818.12	novel	1174	4	NA	NA	0	5117	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	10074.9323819071	4701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACACGTGTAATTACGTCC	-8	True	NA	NA	False	AAAAAG	-21	NA	69452813	69461322	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_69453021_69453646_69453722_69455169_69455288_69455427_69455546_69461294
H1_mix_00027868	chr15	+	2514	16	FSM	ENSG00000140463.14	ENST00000268057.9	2467	16	-47	0	-19	0	multi-exon	FALSE	canonical	3	265	junction_6	28.4250280953638	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCACGGTCTTCCCTTAC	NA	False	NA	15	True	AATAAA	-17	NA	72686159	72738473	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_72686252_72695176_72695229_72709699_72709780_72712243_72712308_72715290_72715403_72716777_72716851_72722793_72722848_72724527_72724656_72727939_72727995_72729615_72729685_72731304_72731458_72731554_72731727_72735112_72735183_72735824_72735967_72736761_72736964_72737477
H1_mix_00027869	chr15	+	860	11	FSM	ENSG00000140463.14	ENST00000569338.5	843	11	-17	0	0	0	multi-exon	FALSE	canonical	3	23	junction_9	95.1172434419753	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAATTTGGGCCTTGTCCA	8	True	NA	NA	False	NA	NA	NA	72686219	72731611	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_72686252_72695176_72695229_72709699_72709780_72712243_72712308_72715290_72715403_72716777_72716851_72722793_72722848_72724527_72724656_72727939_72727995_72731304_72731458_72731554
H1_mix_00027872	chr15	+	7050	28	NIC	ENSG00000067141.17	novel	4441	28	NA	NA	18	-12	combination_of_known_junctions	FALSE	canonical	3	75	junction_7	23.5208222843672	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTTTAATCCAATCAAAC	-24	True	NA	5	True	AATACA	-1	NA	73052480	73305186	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_73052806_73116539_73116858_73122524_73122801_73126416_73126571_73135890_73136028_73176402_73176558_73178306_73178428_73236286_73236507_73244343_73244499_73249059_73249209_73249582_73249722_73253399_73253450_73254681_73254830_73258765_73258877_73260270_73260466_73266315_73266412_73270057_73270234_73270315_73270455_73272454_73272563_73273810_73274006_73278130_73278200_73282963_73283112_73288312_73288552_73289145_73289239_73293389_73293549_73298347_73298612_73301320_73301458_73302612
H1_mix_00027873	chr15	+	5895	24	FSM	ENSG00000067141.17	ENST00000560328.1	5895	24	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_3	24.0736896441174	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAAACTCTGGTCTGGTC	NA	False	NA	17	True	AATACA	-13	NA	73135984	73305198	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_73136028_73176402_73176558_73178306_73178428_73236286_73236507_73244343_73244499_73249059_73249209_73249582_73249722_73253399_73253450_73254681_73254830_73258765_73258877_73260270_73260466_73266315_73266412_73270057_73270234_73270315_73270455_73272454_73272563_73273810_73274006_73278130_73278200_73282963_73283112_73288312_73288552_73289145_73289239_73293389_73293549_73298347_73298612_73301320_73301458_73302612
H1_mix_00027876	chr15	+	3295	10	FSM	ENSG00000103855.18	ENST00000318443.10	3295	10	0	0	0	0	multi-exon	TRUE	canonical	3	636	junction_1	109.778677459201	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTCTCTGTGAAGTGT	-14	True	NA	18	True	AATAAA	-15	NA	73684382	73714514	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_73684461_73699585_73699719_73702254_73702594_73702771_73703087_73703658_73703998_73704175_73704473_73708338_73708474_73709647_73709690_73711134_73711171_73712933
H1_mix_00027878	chr15	+	1238	2	FSM	ENSG00000260469.3	ENST00000615095.1	1224	2	-14	0	-14	0	multi-exon	FALSE	canonical	1	1	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGGTGTTTTATTGCTAA	NA	False	NA	NA	False	ACTAAA	-16	NA	73752302	73770613	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_73752397_73769469
H1_mix_00027879	chr15	+	1193	3	FSM	ENSG00000260469.3	ENST00000663106.1	1193	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTGTTTCCTTTTGTGT	NA	False	NA	44	True	NA	NA	NA	73768121	73770489	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_73768187_73768752_73768861_73769469
H1_mix_00027881	chr15	+	1110	3	FSM	ENSG00000129038.16	ENST00000562548.1	1110	3	0	0	0	0	multi-exon	TRUE	canonical	3	126	junction_1	3	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGGCTCTGCATGCGGC	715	False	NA	12	True	AATAAA	-16	NA	73947215	73952137	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_73947903_73949458_73949575_73951830
H1_mix_00027882	chr15	+	3117	8	FSM	ENSG00000140464.20	ENST00000569477.5	2251	8	-63	-803	-5	0	multi-exon	TRUE	canonical	3	6	junction_7	46.6690475583121	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTGCGAACCCTTATTC	1788	False	NA	17	True	AATAAA	-17	NA	73994667	74036393	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74032571_74032716_74033155_74033415_74034477_74034531_74035131
H1_mix_00027883	chr15	+	2895	7	FSM	ENSG00000140464.20	ENST00000354026.10	2885	7	-10	0	-9	0	multi-exon	FALSE	canonical	3	33	junction_6	43.8536074786201	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGCGAACCCTTATTCC	-29	True	NA	18	True	AATAAA	-18	NA	73994706	74036394	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74033155_74033415_74034477_74034531_74035171
H1_mix_00027884	chr15	+	3039	8	FSM	ENSG00000140464.20	ENST00000268059.10	3029	8	-10	0	-9	0	multi-exon	FALSE	canonical	3	33	junction_7	39.2698669335611	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGCGAACCCTTATTCC	-29	True	NA	18	True	AATAAA	-18	NA	73994706	74036394	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74032571_74032716_74033155_74033415_74034477_74034531_74035171
H1_mix_00027886	chr15	+	4897	9	FSM	ENSG00000140464.20	ENST00000268058.8	5565	9	-4	672	-4	-657	multi-exon	FALSE	canonical	3	9	junction_8	45.7464137938702	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTCTGTGTTCCTTGAG	-24	True	NA	NA	False	NA	NA	NA	73994711	74047155	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74032571_74032716_74033155_74033415_74034477_74034531_74042988_74043140_74044220
H1_mix_00027887	chr15	+	1996	7	FSM	ENSG00000140464.20	ENST00000564428.5	1985	7	-11	0	0	0	multi-exon	FALSE	canonical	3	52	junction_6	38.9657969677682	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGCCTGAGTGTGCGA	-3	True	NA	14	True	AATAAA	-14	NA	73994732	74043338	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74033155_74033415_74034477_74034531_74042988
H1_mix_00027888	chr15	+	2165	8	FSM	ENSG00000140464.20	ENST00000569965.5	2148	8	-17	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	46.3672122015864	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGCCTGAGTGTGCGA	-20	True	NA	14	True	AATAAA	-14	NA	73994715	74043338	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74032571_74032716_74033155_74033423_74034477_74034531_74042988
H1_mix_00027893	chr15	+	1365	4	FSM	ENSG00000247240.9	ENST00000666989.2	1391	4	21	5	-12	0	multi-exon	FALSE	canonical	3	34	junction_1	10.8012344973464	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTTCCCTGTCATGGTC	-15	True	NA	13	True	AATAAA	-18	NA	74461285	74481288	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_74462099_74466035_74466131_74479059_74479279_74481050
H1_mix_00027895	chr15	+	4270	9	FSM	ENSG00000179361.18	ENST00000346246.10	4228	9	-44	2	-30	0	multi-exon	FALSE	canonical	3	810	junction_7	73.904393475625	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAGGTCTCTCTCAGTTG	NA	False	NA	25	True	AATAAA	-18	NA	74541175	74598129	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_74541331_74543859_74544489_74572861_74572934_74573131_74573205_74589819_74590004_74591150_74591435_74591559_74591815_74593137_74593237_74595610
H1_mix_00027897	chr15	+	3787	12	FSM	ENSG00000179335.20	ENST00000454830.6	3787	12	0	0	0	0	multi-exon	TRUE	canonical	3	147	junction_1	28.112818757862	1307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTGTGGAGAGCTAAGTG	892	False	NA	11	True	AATAAA	-18	NA	74615795	74630200	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_74615899_74619196_74619349_74620008_74622217_74622493_74622561_74624901_74625019_74625801_74625969_74627351_74627447_74627538_74627669_74627969_74628053_74628603_74628684_74628941_74629033_74629706
H1_mix_00027900	chr15	+	1854	13	FSM	ENSG00000179335.20	ENST00000395066.9	1854	13	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_3	32.9582016432262	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTGGAGAGCTAAGTGT	-7	True	NA	12	True	AATAAA	-19	NA	74615835	74630201	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_74615899_74619196_74619349_74620008_74620226_74622119_74622217_74622493_74622561_74624901_74625019_74625801_74625969_74627351_74627447_74627538_74627669_74627969_74628053_74628603_74628684_74628941_74629033_74629706
H1_mix_00027905	chr15	+	1484	6	FSM	ENSG00000178802.18	ENST00000563422.5	1481	6	-3	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	22.8508205541945	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGCTCAGGTTAGGAGGC	-10	True	NA	NA	False	AATACA	-39	NA	74890038	74896930	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_74890090_74890526_74890655_74891378_74891580_74892660_74892803_74893137_74893321_74896151
H1_mix_00027909	chr15	+	1883	8	NIC	ENSG00000178802.18	novel	5793	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	50.4942914534678	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGGGGTAATGAGCACT	24	False	NA	18	True	ATTAAA	-17	NA	74890072	74898228	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_74890202_74890526_74890655_74891378_74891580_74892660_74892803_74893137_74893321_74896151_74896326_74897010_74897220_74897511
H1_mix_00027916	chr15	+	4427	3	FSM	ENSG00000167173.19	ENST00000394987.5	4425	3	-2	0	-2	0	multi-exon	FALSE	canonical	3	28	junction_2	1.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGGCCTGTCCGTGTGTT	-1	True	NA	28	True	ATTAAA	-22	NA	75201879	75212169	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_75202060_75205998_75208825_75210748
H1_mix_00027917	chr15	+	4465	3	NIC	ENSG00000167173.19	novel	4425	3	NA	NA	12	0	intron_retention	FALSE	canonical	3	27	junction_2	2	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGGCCTGTCCGTGTGTT	13	False	NA	28	True	ATTAAA	-22	NA	75201893	75212169	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_75202060_75205998_75208877_75210748
H1_mix_00027918	chr15	+	4249	2	FSM	ENSG00000167173.19	ENST00000567617.1	4249	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGGCCTGTCCGTGTGTT	22	False	NA	28	True	ATTAAA	-22	NA	75206048	75212169	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_75208877_75210748
H1_mix_00027921	chr15	+	4214	1	FSM	ENSG00000140365.16	ENST00000564068.1	4204	1	-10	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAATGTGTGCAGGGGG	17	False	NA	NA	False	AATAAA	-10	NA	75336052	75340266	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_75336100_75340300
H1_mix_00027923	chr15	+	728	7	FSM	ENSG00000140365.16	ENST00000338995.10	722	7	-6	0	0	0	multi-exon	FALSE	canonical	3	48	junction_6	313.144624024676	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCAGGGGGTTCTGTT	17	False	NA	NA	False	AATAAA	-17	NA	75336052	75340273	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_75336093_75338061_75338134_75338354_75338421_75338645_75338686_75338984_75339105_75339263_75339345_75339964
H1_mix_00027928	chr15	+	746	6	FSM	ENSG00000140365.16	ENST00000562789.5	746	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	390.160274758976	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTGCAGGGGGTTCTG	15	False	NA	NA	False	AATAAA	-15	NA	75336098	75340271	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_75336231_75338354_75338421_75338645_75338686_75338984_75339105_75339263_75339345_75339964
H1_mix_00027929	chr15	+	1897	3	FSM	ENSG00000140365.16	ENST00000563220.1	1897	3	0	0	0	0	multi-exon	FALSE	canonical	3	828	junction_1	5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATGTGTGCAGGGGGTTC	1978	False	NA	NA	False	AATAAA	-13	NA	75338061	75340269	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_75338421_75338645_75339879_75339964
H1_mix_00027930	chr15	+	595	3	FSM	ENSG00000140398.14	ENST00000568881.1	587	3	-8	0	8	0	multi-exon	FALSE	canonical	0	0	junction_2	1	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGCAGTGCCTACCGCA	2	True	NA	NA	False	NA	NA	NA	75347060	75349024	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_75347474_75347958_75348000_75348883
H1_mix_00027931	chr15	+	346	2	FSM	ENSG00000140398.14	ENST00000569390.1	346	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGGATGTCCGGTCCGTGG	22	False	NA	NA	False	NA	NA	NA	75347391	75348222	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_75347474_75347958
H1_mix_00027932	chr15	+	2121	9	NIC	ENSG00000140398.14	novel	1797	10	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	11.3571288184999	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGCATTTTTAATAAACT	14	False	NA	-11	True	TTTAAA	-15	NA	75347637	75355215	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_75348000_75348883_75349340_75352110_75352231_75352323_75352388_75352601_75352702_75353738_75354278_75354430_75354493_75354652_75354819_75354963
H1_mix_00027936	chr15	+	1477	1	FSM	ENSG00000260274.1	ENST00000563278.1	1430	1	2	-49	2	49	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCCTGAACTGGCCTTG	50	False	NA	NA	False	NA	NA	NA	75368156	75369633	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_75368200_75369600
H1_mix_00027937	chr15	+	264	1	Intergenic	novelGene_490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAATATCTTTAAGG	NA	False	NA	NA	False	NA	NA	NA	75575008	75575272	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_75575000_75575300
H1_mix_00027942	chr15	+	2968	13	FSM	ENSG00000140367.12	ENST00000267938.9	2968	13	0	0	0	0	multi-exon	TRUE	canonical	3	109	junction_2	22.7370231609642	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTACTTTCTCATTTTTCC	0	True	NA	67	True	TTTAAA	-37	NA	75843446	75901078	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_75843847_75854385_75854488_75859877_75859983_75868950_75869011_75873427_75873569_75876186_75876272_75877960_75878022_75879097_75879189_75883365_75883425_75890434_75890484_75890918_75891015_75896994_75897062_75899426
H1_mix_00027944	chr15	+	2180	6	FSM	ENSG00000167196.14	ENST00000569022.1	2164	6	-16	0	-14	0	multi-exon	FALSE	canonical	3	50	junction_1	204.713849067424	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCTGTGCAGGTATGAC	4	True	NA	21	True	AATAAA	-15	NA	75903861	75934107	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_75904104_75913202_75913291_75914109_75914206_75917229_75917395_75929883_75930050_75932684
H1_mix_00027945	chr15	+	10723	7	FSM	ENSG00000167196.14	ENST00000308275.8	10707	7	-16	0	-14	0	multi-exon	FALSE	canonical	0	0	junction_2	212.144146487451	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGAGCTTTTCATTTTG	4	True	NA	8	True	AATAAA	-15	NA	75903861	75942511	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_75904104_75904490_75904630_75913202_75913291_75914109_75914206_75917229_75917395_75929883_75930050_75932684
H1_mix_00027947	chr15	+	1829	7	FSM	ENSG00000117906.14	ENST00000394885.8	6218	7	-101	4490	-90	43	multi-exon	FALSE	canonical	3	1548	junction_4	106.020045274467	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGTTTGTTTGCTTTTCT	0	True	NA	17	True	ATTAAA	-18	NA	76931647	76949903	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_76931986_76932360_76932467_76935525_76935723_76943757_76943872_76947420_76947518_76948409_76948553_76949069
H1_mix_00027948	chr15	+	1883	8	FSM	ENSG00000117906.14	ENST00000320963.9	1750	8	-90	-43	-90	43	multi-exon	FALSE	canonical	3	35	junction_4	759.464258002754	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGTTTGTTTGCTTTTCT	0	True	NA	17	True	ATTAAA	-18	NA	76931647	76949903	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_76931986_76932360_76932467_76935525_76935723_76941636_76941691_76943757_76943872_76947420_76947518_76948409_76948553_76949069
H1_mix_00027953	chr15	+	644	2	FSM	ENSG00000140382.15	ENST00000558845.1	644	2	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGTTTTTTCTTATGCTT	NA	False	NA	14	True	AATAAA	-16	NA	77478292	77479604	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_77478511_77479178
H1_mix_00027954	chr15	+	3558	1	FSM	ENSG00000140382.15	ENST00000558288.1	3558	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTTCAATTTTACTTGC	NA	False	NA	20	True	ATTAAA	-21	NA	77482049	77485607	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_77482000_77485600
H1_mix_00027962	chr15	+	6324	22	FSM	ENSG00000136381.13	ENST00000258886.13	6324	22	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_6	21.0416927661992	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGATTCTTGTTCTGTTTT	-19	True	NA	16	True	AATAAA	-19	NA	78438215	78501453	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_78438357_78439794_78439882_78462921_78463088_78465250_78465389_78466270_78466490_78470531_78470602_78471740_78471925_78473241_78473382_78476187_78476360_78478296_78478398_78483317_78483435_78484760_78484921_78485704_78485841_78487732_78487818_78488179_78488337_78488646_78488772_78490421_78490527_78490618_78490762_78493908_78494057_78494141_78494265_78497125_78497312_78498032
H1_mix_00027963	chr15	+	973	5	FSM	ENSG00000136381.13	ENST00000559676.1	973	5	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_1	18.8729303501073	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGATAAAATAGAAGTAAG	NA	False	NA	NA	False	TTTAAA	-7	NA	78483419	78488756	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_78483435_78484760_78484921_78485704_78485841_78487732_78487818_78488179
H1_mix_00027968	chr15	+	1110	9	FSM	ENSG00000041357.16	ENST00000559082.5	1094	9	-16	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	1238.37562455824	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAAATGAAGGAATAAATT	NA	False	NA	10	True	AATAAA	-11	NA	78540404	78549186	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_78540464_78541904_78541931_78542176_78542220_78542482_78542646_78544189_78544268_78544868_78544958_78545633_78545765_78546574_78546699_78548789
H1_mix_00027969	chr15	+	1041	8	FSM	ENSG00000041357.16	ENST00000413382.6	1019	8	-22	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	1337.87682847236	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTGTAGCAGTAATTGT	NA	False	NA	28	True	AATAAA	-29	NA	78540404	78549204	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_78540540_78541904_78541931_78542176_78542220_78544189_78544268_78544868_78544958_78545633_78545765_78546574_78546699_78548789
H1_mix_00027970	chr15	+	2764	6	FSM	ENSG00000041357.16	ENST00000559934.5	2741	6	-23	0	0	0	multi-exon	FALSE	canonical	3	3263	junction_5	293.117450862278	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAGAAAGAAAAAGAACAG	-19	True	NA	NA	False	AAAACA	-30	NA	78540420	78548906	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_78542646_78544189_78544268_78544868_78544958_78545633_78545765_78546574_78546699_78548789
H1_mix_00027971	chr15	+	2617	6	FSM	ENSG00000041357.16	ENST00000560099.5	2596	6	-21	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	1528.97154976801	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTGTAGCAGTAATTGT	0	True	NA	28	True	AATAAA	-29	NA	78540439	78549204	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_78542220_78544189_78544268_78544868_78544958_78545633_78545765_78546574_78546699_78548789
H1_mix_00027972	chr15	+	4401	9	FSM	ENSG00000041357.16	ENST00000044462.12	4378	9	-23	0	0	0	multi-exon	FALSE	canonical	3	3263	junction_8	245.027932081222	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTACTCCTGTGTATAA	-19	True	NA	NA	False	AATAAA	-14	NA	78540420	78552417	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_78540540_78541904_78541931_78542176_78542220_78542482_78542646_78544189_78544268_78544868_78544958_78545633_78545765_78546574_78546699_78548789
H1_mix_00027973	chr15	+	773	8	FSM	ENSG00000041357.16	ENST00000558281.5	773	8	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_7	1316.00910300183	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCACCATTTCAGTGTAAAA	38	False	NA	NA	False	GATAAA	-30	NA	78540477	78548970	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_78540540_78541904_78541931_78542176_78542220_78542482_78542646_78544189_78544268_78544868_78544958_78545633_78545765_78548789
H1_mix_00027976	chr15	+	1892	6	NNC	ENSG00000169684.13	novel	3623	6	NA	NA	3	423	intron_retention	FALSE	canonical	3	27	junction_5	58.4410814410548	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTTTAAGGCTTACTTT	13	False	NA	19	True	AATAAA	-20	NA	78565573	78594124	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_78565826_78580810_78580963_78586644_78586690_78588313_78588424_78589804_78590105_78593091
H1_mix_00027979	chr15	+	1883	6	NIC	ENSG00000169684.13	novel	3623	6	NA	NA	4	421	intron_retention	FALSE	canonical	3	23	junction_5	59.9599866577704	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTCCTTTAAGGCTTACT	14	False	NA	17	True	AATAAA	-18	NA	78565574	78594122	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_78565826_78580810_78580963_78586644_78586690_78588313_78588424_78589804_78590099_78593091
H1_mix_00027982	chr15	+	678	8	FSM	ENSG00000185787.15	ENST00000559930.5	678	8	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	2732.0083589677	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTAAAACCGTGGCTTGT	-2	True	NA	NA	False	AGTAAA	-11	NA	78872886	78892259	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_78873119_78878212_78878260_78880511_78880580_78886140_78886228_78887268_78887350_78890988_78891015_78891483_78891573_78892211
H1_mix_00027983	chr15	+	2175	12	FSM	ENSG00000185787.15	ENST00000426013.7	2172	12	-3	0	0	0	multi-exon	FALSE	canonical	3	6761	junction_6	612.367739135468	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTCTCCCCTTTGATAGG	-2	True	NA	NA	False	ATTAAA	-26	NA	78872886	78898139	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_78873058_78878212_78878260_78880511_78880580_78886140_78886228_78887268_78887350_78890988_78891015_78891483_78891573_78892211_78892314_78893538_78893628_78894057_78894231_78894819_78894905_78896982
H1_mix_00027984	chr15	+	870	10	FSM	ENSG00000185787.15	ENST00000558746.5	874	10	0	4	0	-4	multi-exon	FALSE	canonical	3	33	junction_4	2544.55395688639	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCTGTGCTTGAAATT	37	False	NA	NA	False	NA	NA	NA	78872953	78894904	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_78873058_78878212_78878260_78880511_78880580_78886140_78886228_78890988_78891015_78891483_78891573_78892211_78892314_78893538_78893628_78894057_78894231_78894819
H1_mix_00027985	chr15	+	1729	13	NNC	ENSG00000185787.15	novel	2359	13	NA	NA	0	30455	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	2270.81444487557	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGTAAAAGAGACAGGGA	37	False	NA	NA	False	AAAAAG	-5	NA	78872953	78928594	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_78873058_78878212_78878260_78880511_78880580_78886140_78886228_78887268_78887350_78890988_78891015_78891483_78891573_78892211_78892314_78893538_78893628_78894057_78894231_78894819_78894905_78896982_78897729_78928562
H1_mix_00027986	chr15	+	1065	8	FSM	ENSG00000185787.15	ENST00000559258.5	1047	8	-18	0	0	0	multi-exon	FALSE	canonical	3	6869	junction_5	527.494540062661	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCTCGTGGAAACACAGA	26	False	NA	NA	False	NA	NA	NA	78873024	78893601	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_78873058_78878212_78878260_78880511_78880580_78886140_78886228_78887268_78887350_78890988_78891573_78892211_78892314_78893538
H1_mix_00027992	chr15	+	1706	7	FSM	ENSG00000086666.19	ENST00000261749.11	1706	7	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_1	794.156085973588	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTTTTCTCTTATTCTT	-3	True	NA	25	True	AATAAA	-27	NA	80059675	80138393	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_80059810_80098415_80098579_80120327_80120499_80121711_80121821_80122699_80122801_80131179_80131294_80137479
H1_mix_00027993	chr15	+	1472	6	FSM	ENSG00000086666.19	ENST00000558494.5	1472	6	0	0	0	0	multi-exon	FALSE	canonical	3	1533	junction_1	255.987812209878	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAGGAAAACCAGA	35	True	NA	-8	True	NA	NA	NA	80059713	80138360	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_80059810_80120327_80120499_80121711_80121821_80122699_80122801_80131179_80131294_80137479
H1_mix_00027996	chr15	+	1624	7	FSM	ENSG00000086666.19	ENST00000559775.5	1602	7	-22	0	-3	0	multi-exon	FALSE	canonical	3	19	junction_1	869.317820030294	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAATAAAAAGGAAAACCA	-8	True	NA	-10	True	NA	NA	NA	80072560	80138358	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_80072648_80098415_80098579_80120327_80120499_80121711_80121821_80122699_80122801_80131179_80131294_80137479
H1_mix_00027997	chr15	+	1463	6	FSM	ENSG00000086666.19	ENST00000559835.5	1446	6	-17	0	-3	0	multi-exon	FALSE	canonical	3	34	junction_1	800.491099263446	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAGGAAAACCAGA	-8	True	NA	-8	True	NA	NA	NA	80072560	80138360	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_80072648_80120327_80120499_80121711_80121821_80122699_80122801_80131179_80131294_80137479
H1_mix_00027999	chr15	+	2608	2	FSM	ENSG00000086666.19	ENST00000557983.1	2594	2	0	-14	0	0	multi-exon	FALSE	canonical	3	1913	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTTTTCTCTTATTCTT	NA	False	NA	25	True	AATAAA	-27	NA	80129599	80138393	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_80131294_80137479
H1_mix_00028002	chr15	+	1592	14	FSM	ENSG00000103876.14	ENST00000561421.6	1456	14	-142	6	2	0	multi-exon	FALSE	canonical	3	93	junction_8	13.3828469211889	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGCAGATGCAGCTGTGTC	57	False	NA	13	True	AATAAA	-26	NA	80152856	80186343	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_80153136_80158059_80158171_80159755_80159878_80160409_80160460_80162245_80162337_80168051_80168150_80168263_80168317_80172148_80172249_80173013_80173145_80175015_80175092_80177536_80177584_80180123_80180226_80181041_80181160_80186129
H1_mix_00028003	chr15	+	788	5	FSM	ENSG00000172379.22	ENST00000529181.1	1145	5	0	357	0	-357	multi-exon	FALSE	canonical	3	72	junction_4	5.2618912949623	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGGAGCTCCCTTTAT	8	True	NA	NA	False	NA	NA	NA	80404349	80475223	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_80404547_80450879_80450995_80457928_80457977_80470217_80470432_80475009
H1_mix_00028008	chr15	+	468	4	FSM	ENSG00000188659.10	ENST00000562097.5	445	4	-23	0	-6	0	multi-exon	FALSE	canonical	3	11	junction_2	4.02768199119819	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCTCTCCTTATGTAGC	-2	True	NA	0	True	AATAAA	-11	NA	82262803	82264881	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_82262933_82263138_82263189_82263358_82263439_82264672
H1_mix_00028010	chr15	+	3328	4	FSM	ENSG00000188659.10	ENST00000682753.1	3304	4	-24	0	-16	0	multi-exon	FALSE	canonical	1	4	junction_3	4.92160768674447	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTCTTTACCTAATTTT	-12	True	NA	NA	False	AATAAA	-30	NA	82262793	82284927	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_82262933_82265568_82265749_82271602_82271803_82282118
H1_mix_00028013	chr15	+	5150	17	Fusion	ENSG00000259429.5_ENSG00000197978.10	novel	6549	6	NA	NA	0	0	multi-exon	FALSE	canonical	2	12	junction_1	14.7473514571261	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGTGTCTTGAAAACT	14	False	NA	30	True	ATTAAA	-30	NA	82355141	82439153	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr15_+_82355375_82400659_82400717_82404611_82404752_82408287_82408368_82414600_82414805_82415527_82415676_82418635_82418793_82419207_82419248_82419367_82419466_82419979_82420076_82431829_82431950_82432816_82432898_82433561_82433650_82434033_82434603_82434868_82434930_82435966_82436070_82436278
H1_mix_00028014	chr15	+	600	2	FSM	ENSG00000259429.5	ENST00000561287.1	600	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAGAAAAGCTAAGCAT	NA	False	NA	NA	False	GATAAA	-19	NA	82414680	82416003	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_82414805_82415527
H1_mix_00028016	chr15	+	6302	6	FSM	ENSG00000197978.10	ENST00000618706.1	6549	6	247	0	247	0	multi-exon	FALSE	canonical	3	39	junction_4	10.0079968025574	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGTGTCTTGAAAACT	NA	False	NA	30	True	ATTAAA	-30	NA	82430291	82439153	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_82432898_82433561_82433650_82434033_82434603_82434868_82434930_82435966_82436070_82436278
H1_mix_00028018	chr15	+	590	2	FSM	ENSG00000250988.7	ENST00000544685.2	594	2	4	0	2	0	multi-exon	FALSE	canonical	3	82	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTACAAAAAACAGTGTTGA	-2	True	NA	NA	False	TATAAA	-9	NA	82750567	82754937	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_82750849_82754628
H1_mix_00028026	chr15	+	1647	9	FSM	ENSG00000140600.17	ENST00000563901.5	1647	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	44.9325883963967	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGCCTTGGTTATTTTT	2	True	NA	30	True	AATAAA	-20	NA	83447375	83618739	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_83447579_83559252_83559322_83565133_83565207_83568535_83568673_83572564_83572699_83576582_83576742_83586982_83587087_83588661_83588772_83618081
H1_mix_00028032	chr15	+	904	3	FSM	ENSG00000176371.14	ENST00000379358.7	906	3	0	2	0	-2	multi-exon	FALSE	canonical	3	61	junction_2	30.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGTTGCTTCCGAGCTC	29	False	NA	11	True	AATAAA	-19	NA	84601049	84616612	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_84601136_84603819_84604334_84616308
H1_mix_00028039	chr15	+	10238	14	FSM	ENSG00000136383.7	ENST00000258888.6	10238	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	18.9533841102524	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATCTTGGTCATACAGC	-1	True	NA	NA	False	AATAAA	-18	NA	84817355	84873479	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_84817596_84823329_84823369_84827483_84827606_84838979_84839098_84839701_84840933_84856391_84858556_84859242_84859391_84859775_84859904_84860036_84860073_84862634_84862916_84863551_84863641_84864441_84864666_84867316_84867366_84868110
H1_mix_00028047	chr15	+	3765	4	FSM	ENSG00000170776.22	ENST00000560302.5	3765	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	2.94392028877595	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATTGTGTAAGTTGTAT	0	True	NA	NA	False	AATAAA	-9	NA	85380639	85536997	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_85380799_85485709_85485754_85521427_85521576_85533583
H1_mix_00028048	chr15	+	13230	36	NIC	ENSG00000170776.22	novel	13327	37	NA	NA	0	0	intron_retention	FALSE	canonical	3	28	junction_4	13.8815396428906	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTGGTGCTGTGACTTA	0	True	NA	15	True	AATAAA	-15	NA	85380639	85749355	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_85380799_85485709_85485754_85521427_85521576_85533583_85533881_85543771_85543956_85575130_85575330_85578929_85582108_85585701_85585824_85639373_85639450_85645817_85645955_85655416_85655788_85664562_85664756_85669721_85669831_85682157_85682213_85684740_85684874_85693276_85693452_85708018_85708087_85710578_85710646_85715787_85715924_85717289_85717403_85718012_85718160_85719075_85719327_85721990_85722117_85722229_85722348_85723071_85723321_85726409_85726487_85727065_85727248_85727380_85727464_85730512_85730708_85734991_85735151_85735559_85735631_85736089_85736135_85740221_85740273_85741045_85741496_85743491_85743826_85744627
H1_mix_00028050	chr15	+	1060	6	FSM	ENSG00000181991.16	ENST00000560708.5	1060	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	125.875176266014	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCACCTGTCATAATTTT	81	False	NA	4	True	AATAAA	-6	NA	88467452	88478251	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_88467783_88467907_88468025_88472626_88472726_88475171_88475240_88476988_88477055_88477871
H1_mix_00028051	chr15	+	894	6	NIC	ENSG00000181991.16	novel	3392	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	112	junction_1	90.9162251746079	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCACCTGTCATAATTTT	-2	True	NA	4	True	AATAAA	-6	NA	88467677	88478251	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_88467783_88467910_88468025_88472626_88472726_88475109_88475240_88476988_88477055_88477871
H1_mix_00028053	chr15	+	778	5	FSM	ENSG00000181991.16	ENST00000353598.6	766	5	-12	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	124.383228371031	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATAATTTTGAGATTTT	0	True	NA	12	True	AATAAA	-14	NA	88467705	88478259	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_88467783_88467907_88468025_88475109_88475240_88476988_88477055_88477871
H1_mix_00028054	chr15	+	2002	6	FSM	ENSG00000181991.16	ENST00000559323.5	2002	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	120.150572200052	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTTTGAGATTTTTTGC	0	True	NA	16	True	AATAAA	-18	NA	88467705	88478263	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_88467783_88467907_88469146_88472626_88472726_88475109_88475240_88476988_88477055_88477871
H1_mix_00028055	chr15	+	3422	6	FSM	ENSG00000181991.16	ENST00000325844.9	3392	6	-30	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	40.4949379552556	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTACTGTCTCTTAATCAT	-2	True	NA	11	True	AATAAA	-18	NA	88467677	88480776	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_88467783_88467907_88468025_88472626_88472726_88475109_88475240_88476988_88477055_88477871
H1_mix_00028057	chr15	+	2676	3	Antisense	novelGene_ENSG00000140543.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	87	junction_2	52.5	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGCGTTTTCTCTAACA	NA	False	NA	18	True	AATAAA	-22	NA	88538148	88546195	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr15_+_88538860_88543466_88543716_88544479
H1_mix_00028058	chr15	+	2835	3	Antisense	novelGene_ENSG00000140543.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	72	junction_2	60	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGCGTTTTCTCTAACA	NA	False	NA	18	True	AATAAA	-22	NA	88538148	88546195	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr15_+_88538860_88543466_88543875_88544479
H1_mix_00028062	chr15	+	1390	4	FSM	ENSG00000172183.16	ENST00000306072.10	1583	4	0	193	0	-193	multi-exon	FALSE	canonical	3	20	junction_1	12.2836838484589	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGGGCACCCCAGGAAGA	-6	True	NA	NA	False	NA	NA	NA	88639015	88656290	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_88639077_88639342_88639595_88652109_88652311_88655414
H1_mix_00028063	chr15	+	5634	2	FSM	ENSG00000172183.16	ENST00000557824.1	5634	2	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACTGGGTCCTCTTCTTA	4957	False	NA	30	True	AGTAAA	-25	NA	88646911	88655649	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_88652311_88655414
H1_mix_00028067	chr15	+	4129	38	NIC	ENSG00000140525.19	novel	4733	38	NA	NA	7	12	combination_of_known_junctions	TRUE	canonical	3	119	junction_1	97.2519714244701	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTTCATTTTTACCCAA	-38	True	NA	38	True	AATAAA	-34	NA	89243955	89316493	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_89244045_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521_89264608_89268398_89268526_89273376_89273470_89274167_89274305_89276710_89276892_89278686_89278775_89281169_89281301_89281764_89281836_89283135_89283251_89285095_89285219_89290212_89290282_89291612_89291715_89292687_89292865_89292941_89293064_89293832_89293998_89294914_89295095_89299799_89299967_89300299_89300386_89301325_89301443_89303863_89303916_89305114_89305243_89305340_89305410_89305604_89305699_89306006_89306195_89307475_89307530_89307612_89307673_89312903_89312973_89314611_89314708_89315281_89315390_89316396
H1_mix_00028068	chr15	+	4753	38	FSM	ENSG00000140525.19	ENST00000310775.12	4733	38	-23	3	7	0	multi-exon	FALSE	canonical	3	241	junction_1	84.2970503362846	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTCTGTGGTTGAAGT	-38	True	NA	13	True	AATAAA	-13	NA	89243955	89317128	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_89244034_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521_89264608_89268398_89268526_89273376_89273470_89274167_89274305_89276710_89276892_89278686_89278775_89281169_89281301_89281764_89281836_89283135_89283251_89285095_89285219_89290212_89290282_89291612_89291715_89292687_89292865_89292941_89293064_89293832_89293998_89294914_89295095_89299799_89299967_89300299_89300386_89301325_89301443_89303863_89303916_89305114_89305243_89305340_89305410_89305604_89305699_89306006_89306195_89307475_89307530_89307612_89307673_89312903_89312973_89314611_89314708_89315281_89315390_89316396
H1_mix_00028071	chr15	+	4201	38	NIC	ENSG00000140525.19	novel	4733	38	NA	NA	0	95	combination_of_known_junctions	FALSE	canonical	3	209	junction_1	87.4480666083747	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTCAACTGCACCTTCA	-4	True	NA	121	True	NA	NA	NA	89243989	89316576	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_89244068_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521_89264608_89268398_89268526_89273376_89273470_89274167_89274305_89276710_89276892_89278686_89278775_89281169_89281301_89281764_89281836_89283135_89283251_89285095_89285219_89290212_89290282_89291612_89291715_89292687_89292865_89292941_89293064_89293832_89293998_89294914_89295095_89299799_89299967_89300299_89300386_89301325_89301443_89303863_89303916_89305114_89305243_89305340_89305410_89305604_89305699_89306006_89306195_89307475_89307530_89307612_89307673_89312903_89312973_89314611_89314708_89315281_89315390_89316396
H1_mix_00028072	chr15	+	3741	36	NIC	ENSG00000140525.19	novel	4713	37	NA	NA	-2	12	combination_of_known_splicesites	FALSE	canonical	3	32	junction_22	116.569481776461	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTTCATTTTTACCCAA	-6	True	NA	38	True	AATAAA	-34	NA	89243987	89316493	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_89244034_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521_89264608_89268398_89268526_89273376_89273470_89274167_89274305_89276710_89276892_89278686_89278775_89281169_89281301_89281764_89281836_89283135_89283251_89285095_89285219_89290212_89290282_89291612_89291715_89292687_89292865_89292941_89293064_89299799_89299967_89300299_89300386_89301325_89301443_89303863_89303916_89305114_89305243_89305340_89305410_89305604_89305699_89306006_89306195_89307475_89307530_89307612_89307673_89312903_89312973_89314611_89314708_89315281_89315390_89316396
H1_mix_00028075	chr15	+	4196	39	NIC	ENSG00000140525.19	novel	4503	39	NA	NA	1	12	combination_of_known_junctions	FALSE	canonical	3	4	junction_1	131.433891095607	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTTCATTTTTACCCAA	-3	True	NA	38	True	AATAAA	-34	NA	89243990	89316493	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_89244045_89245606_89245709_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521_89264608_89268398_89268526_89273376_89273470_89274167_89274305_89276710_89276892_89278686_89278775_89281169_89281301_89281764_89281836_89283135_89283251_89285095_89285219_89290212_89290282_89291612_89291715_89292687_89292865_89292941_89293064_89293832_89293998_89294914_89295095_89299799_89299967_89300299_89300386_89301325_89301443_89303863_89303916_89305114_89305243_89305340_89305410_89305604_89305699_89306006_89306195_89307475_89307530_89307612_89307673_89312903_89312973_89314611_89314708_89315281_89315390_89316396
H1_mix_00028080	chr15	+	3820	37	NIC	ENSG00000140525.19	novel	4503	39	NA	NA	-3	-1	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	152.85032620908	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTTTGGGGCTTCTGCTT	20	True	NA	25	True	AATAAA	-21	NA	89244013	89316480	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_89244068_89245755_89245840_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521_89264608_89268398_89268526_89273376_89273470_89274167_89274305_89276710_89276892_89278686_89278775_89281169_89281301_89281764_89281836_89283135_89283251_89285095_89285219_89290212_89290282_89291612_89291715_89292687_89292865_89292941_89293064_89299799_89299967_89300299_89300386_89301325_89301443_89303863_89303916_89305114_89305243_89305340_89305410_89305604_89305699_89306006_89306195_89307475_89307530_89307612_89307673_89312903_89312973_89314611_89314708_89315281_89315390_89316396
H1_mix_00028082	chr15	+	6241	38	NNC	ENSG00000140525.19	novel	4503	39	NA	NA	1087	12	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_1	102.70330014051	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTTCATTTTTACCCAA	1343	False	NA	38	True	AATAAA	-34	NA	89245336	89316493	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_89247538_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521_89264608_89268398_89268526_89273376_89273470_89274167_89274305_89276710_89276892_89278686_89278775_89281169_89281301_89281764_89281836_89283135_89283251_89285095_89285219_89290212_89290282_89291612_89291715_89292687_89292865_89292941_89293064_89293832_89293998_89294914_89295095_89299799_89299967_89300299_89300386_89301325_89301443_89303863_89303916_89305114_89305243_89305340_89305410_89305604_89305699_89306006_89306195_89307475_89307530_89307612_89307673_89312903_89312973_89314611_89314708_89315281_89315390_89316396
H1_mix_00028090	chr15	+	3796	14	FSM	ENSG00000185033.15	ENST00000411539.7	3780	14	-11	-5	-11	5	multi-exon	TRUE	canonical	3	139	junction_6	15.7551531909723	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTTCCTCTTCAAGGACA	-21	True	NA	40	True	AATAAA	-27	NA	90201318	90229665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_90201736_90217438_90217603_90217766_90217830_90219792_90219892_90220981_90221094_90221366_90221481_90221613_90221766_90223558_90223741_90223837_90223989_90224967_90225179_90225281_90225398_90225660_90225828_90227556_90227643_90227903
H1_mix_00028092	chr15	+	1355	3	FSM	ENSG00000182768.9	ENST00000379095.5	1340	3	-15	0	-2	0	multi-exon	FALSE	canonical	3	305	junction_1	783.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTTTGGTGCTCTTTG	NA	False	NA	15	True	AATAAA	-17	NA	90265656	90272211	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_90265877_90266287_90266399_90271187
H1_mix_00028101	chr15	+	5012	22	FSM	ENSG00000197299.13	ENST00000680772.1	5033	22	21	0	21	0	multi-exon	FALSE	canonical	3	10	junction_1	54.7352730273512	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCAAGAGAATCGCTTGAA	6725	False	NA	NA	False	NA	NA	NA	90724092	90815982	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_90724144_90747388_90747491_90749366_90750068_90751786_90751947_90754810_90754939_90760146_90760280_90760593_90761256_90762965_90763158_90765295_90765415_90766909_90767024_90769132_90769232_90769437_90769587_90782821_90782929_90784920_90785082_90790648_90790845_90794166_90794358_90798189_90798338_90803520_90803721_90804166_90804360_90809136_90809260_90811204_90811407_90815101
H1_mix_00028107	chr15	+	2737	19	FSM	ENSG00000182511.12	ENST00000328850.8	2737	19	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_11	13.2842847839928	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCCTGGCATGTGCACTC	0	True	NA	9	True	AATAAA	-20	NA	90884503	90895776	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_90884545_90885036_90885259_90885411_90885586_90886960_90887058_90887186_90887371_90889305_90889444_90889516_90889637_90889839_90889963_90890091_90890279_90890400_90890485_90890981_90891192_90891553_90891677_90892057_90892112_90892706_90892826_90893099_90893195_90893290_90893415_90893653_90893812_90893935_90894059_90895415
H1_mix_00028109	chr15	+	4060	24	NIC	ENSG00000196547.15	novel	6394	23	NA	NA	12	-34	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	24.3964576436346	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTTGGGTTGTGAGTG	-25	True	NA	NA	False	NA	NA	NA	90902388	90920042	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_90902527_90903230_90903433_90904189_90904340_90905250_90905509_90905578_90905724_90905844_90906017_90906369_90906498_90906739_90906914_90907308_90907496_90909326_90909505_90910089_90910293_90910500_90910684_90910846_90910962_90911170_90911239_90911415_90911551_90912042_90912280_90912516_90912665_90912876_90912992_90913272_90913407_90913613_90913756_90916122_90916257_90918193_90918389_90918644_90918756_90919634
H1_mix_00028111	chr15	+	5422	24	NIC	ENSG00000196547.15	novel	6394	23	NA	NA	-69	-5	intron_retention	TRUE	canonical	0	0	junction_2	18.6777467340785	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAACCTAAGAATCAACTG	10	True	NA	12	True	AATAAA	-13	NA	90902625	90921186	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_90902976_90903230_90903433_90904189_90904340_90905250_90905509_90905578_90905724_90905844_90906017_90906369_90906498_90906739_90906914_90907308_90907496_90909326_90909505_90910089_90910293_90910500_90910684_90910846_90910962_90911170_90911239_90911384_90911551_90912042_90912280_90912541_90912665_90912876_90912992_90913272_90913407_90913613_90913756_90916122_90916257_90918193_90918389_90918644_90918756_90919634
H1_mix_00028116	chr15	+	3936	8	FSM	ENSG00000196547.15	ENST00000557990.1	956	8	-104	-2876	-96	-8	multi-exon	FALSE	canonical	3	21	junction_4	25.3344969299546	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGAAGTCTTAGATGTG	1232	False	NA	4	True	AATAAA	-10	NA	90912783	90922571	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_90912992_90913272_90913407_90913613_90913756_90916122_90916257_90916585_90916661_90918193_90918389_90918644_90918756_90919634
H1_mix_00028118	chr15	+	3207	20	ISM	ENSG00000140553.18	ENST00000672480.1	4002	23	5105	0	0	0	3prime_fragment	TRUE	canonical	3	135	junction_1	48.4499341783212	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCCCTGTCCTTGGG	-8	True	NA	26	True	AATAAA	-17	NA	90935284	90954093	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_90935331_90935543_90935706_90935945_90935983_90936284_90936461_90939730_90939824_90940305_90940474_90942436_90942606_90942911_90943083_90944891_90945064_90946613_90946915_90947795_90947891_90948141_90948284_90948653_90948795_90949315_90949444_90949653_90949721_90950153_90950268_90950499_90950616_90952928_90953047_90953154_90953311_90953458
H1_mix_00028120	chr15	+	3178	6	FSM	ENSG00000166965.13	ENST00000555737.5	3157	6	-21	0	-18	0	multi-exon	FALSE	canonical	3	20	junction_1	40.36533165973	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGCTTTTGTGTCGTTT	-28	True	NA	20	True	GATAAA	-13	NA	90954862	90962222	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_90954949_90955799_90955884_90956611_90957504_90957603_90957726_90959899_90959999_90960327
H1_mix_00028121	chr15	+	3512	8	FSM	ENSG00000166965.13	ENST00000394258.7	2675	8	-577	-260	-574	260	multi-exon	FALSE	canonical	3	57	junction_1	19.4233186176423	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCCATGATGTAGCTTAT	4469	False	NA	NA	False	NA	NA	NA	90954306	90963385	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_90954949_90956611_90956901_90957112_90957504_90957603_90957726_90959899_90959999_90960327_90960499_90961024_90961055_90961617
H1_mix_00028122	chr15	+	1963	9	NIC	ENSG00000166965.13	novel	2675	8	NA	NA	8	0	intron_retention	FALSE	canonical	3	20	junction_1	33.1565887117478	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTTGATGGTCATTTT	6	True	NA	17	True	NA	NA	NA	90954896	90962342	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_90954949_90955799_90955884_90956611_90956901_90957112_90957504_90957603_90957726_90959899_90959999_90960327_90960499_90961024_90961055_90961617
H1_mix_00028123	chr15	+	2110	7	FSM	ENSG00000166965.13	ENST00000557266.5	2110	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	40.2781992315115	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTTGATGGTCATTTT	-2	True	NA	17	True	NA	NA	NA	90955381	90962342	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_90955453_90956611_90957504_90957603_90957726_90959899_90959999_90960327_90960499_90961024_90961055_90961617
H1_mix_00028125	chr15	+	7853	13	FSM	ENSG00000185518.12	ENST00000394232.6	12563	13	0	4710	0	2570	multi-exon	FALSE	canonical	2	3	junction_11	3.80423740350444	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGCAGGGCTTGAAGT	5	True	NA	NA	False	NA	NA	NA	91100256	91297855	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_91100364_91225872_91226715_91251818_91252000_91252368_91252521_91258420_91258555_91260319_91260410_91266581_91266693_91267554_91267644_91268440_91268606_91281727_91281862_91284020_91284222_91289520_91289681_91292368
H1_mix_00028133	chr15	+	1776	4	FSM	ENSG00000272888.8	ENST00000554133.5	1776	4	0	0	0	0	multi-exon	FALSE	canonical	3	888	junction_2	70.7295317859992	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTTAGTTTTATTTTA	319	False	NA	77	True	NA	NA	NA	92884370	92898130	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_92885585_92886168_92886255_92892003_92892073_92897723
H1_mix_00028134	chr15	+	977	3	FSM	ENSG00000272888.8	ENST00000555520.1	977	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	515	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTAACACTTAAAAATTT	1167	False	NA	19	True	AATAAA	-2	NA	92887755	92898072	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_92888315_92892003_92892073_92897723
H1_mix_00028143	chr15	+	224	1	Intergenic	novelGene_494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCGGCAGCTGCTGCATG	NA	False	NA	NA	False	ATTAAA	-1	NA	96873666	96873890	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_96873700_96873900
H1_mix_00028150	chr15	+	12232	21	FSM	ENSG00000140443.15	ENST00000649865.1	12232	21	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_13	126.584596219287	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTCTCTGGTTTGGTT	13	True	NA	14	True	AATAAA	-16	NA	98648538	98964530	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_98649676_98707561_98708108_98891324_98891638_98896756_98896906_98899476_98899622_98908684_98908900_98911314_98911442_98913043_98913283_98915963_98916132_98916671_98916877_98922147_98922432_98923875_98924013_98924524_98924685_98929560_98929661_98930234_98930306_98934823_98935054_98935315_98935427_98939200_98939361_98942922_98943053_98948573_98948709_98957060
H1_mix_00028153	chr15	+	1173	4	FSM	ENSG00000278090.3	ENST00000669003.1	1174	4	0	1	0	-1	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACATTTGTGTATGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	99014768	99031049	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_99014814_99024599_99024674_99027564_99027790_99030220
H1_mix_00028155	chr15	+	1272	9	FSM	ENSG00000168904.15	ENST00000447360.6	1235	9	-37	0	5	0	multi-exon	FALSE	canonical	3	20	junction_8	28.0131107697806	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATTTGTCTTCTGTGTTT	-10	True	NA	24	True	AATATA	-20	NA	99251467	99386296	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_99251542_99255897_99256126_99276575_99276617_99287256_99287295_99287813_99287952_99333922_99334130_99352368_99352472_99361335_99361512_99386029
H1_mix_00028156	chr15	+	5865	10	FSM	ENSG00000168904.15	ENST00000301981.8	5852	10	-13	0	5	0	multi-exon	FALSE	canonical	3	68	junction_1	12.6227308191743	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACGAGTTTTGTGGTGTTT	-10	True	NA	NA	False	NA	NA	NA	99251467	99390729	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_99251542_99255897_99256126_99276575_99276617_99287256_99287295_99287813_99287952_99333922_99334130_99352368_99352472_99361335_99361512_99363105_99363266_99386029
H1_mix_00028157	chr15	+	982	10	FSM	ENSG00000168904.15	ENST00000561276.5	967	10	-15	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	30.2177284240744	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTTAGTTTTGTGGCTT	27	True	NA	NA	False	NA	NA	NA	99251504	99386035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_99251542_99255897_99255974_99276575_99276617_99287256_99287295_99287813_99287952_99333922_99334130_99352368_99352472_99361335_99361512_99363105_99363266_99386029
H1_mix_00028160	chr15	+	5586	10	FSM	ENSG00000068305.18	ENST00000691492.1	2633	10	-228	-2725	90	0	multi-exon	FALSE	canonical	3	39	junction_1	43.7063715444356	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTGAAGACAATGCTAAAG	370	False	NA	21	True	AATAAA	-25	NA	99565789	99716406	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_99566105_99632977_99633174_99645560_99645765_99671322_99671455_99674392_99674613_99675398_99675459_99690240_99690429_99706728_99706856_99710633_99710761_99712389
H1_mix_00028163	chr15	+	2865	11	FSM	ENSG00000068305.18	ENST00000557785.5	2854	11	-11	0	0	0	multi-exon	FALSE	canonical	3	91	junction_8	31.1064302034161	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTGGAAAAAAAAAGCCATG	-26	True	NA	NA	False	AAAACA	-22	NA	99565968	99713782	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_99566105_99598429_99598512_99632977_99633174_99645560_99645765_99671322_99671455_99674392_99674613_99675398_99675459_99690240_99690429_99706728_99706856_99710633_99710761_99712389
H1_mix_00028164	chr15	+	2378	9	NNC	ENSG00000068305.18	novel	2854	11	NA	NA	2	-17321	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_8	46.3896540189728	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGGAGGGAGGAATTGAC	-13	True	NA	7	True	AATAAA	-17	NA	99565981	99695248	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_99566105_99598429_99598512_99632977_99633174_99645560_99645765_99671322_99671455_99674392_99674613_99675398_99675459_99690240_99690429_99694075
H1_mix_00028178	chr15	+	1449	9	NNC	ENSG00000185596.16	novel	1644	10	NA	NA	62	-7	at_least_one_novel_splicesite	TRUE	canonical	3	6	junction_4	88.6269393299802	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCAATCAATAAAGAACTGA	4530	False	NA	NA	False	NA	NA	NA	101966136	101976536	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_101966224_101972595_101972695_101972900_101973048_101973219_101973353_101973904_101974103_101974194_101974354_101975012_101975166_101975923_101975993_101976132
H1_mix_00028179	chr15	-	5846	26	NNC	ENSG00000180229.12	novel	4383	27	NA	NA	-6119	1784	intron_retention	FALSE	non_canonical	0	0	junction_1	75.1803165728903	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGCAAAACTCATCTCCT	NA	False	NA	NA	False	NA	NA	NA	20483512	20381330	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_20382190_20382348_20383457_20431092_20431236_20435848_20435993_20437293_20437433_20438591_20438823_20438926_20439124_20439507_20439656_20440473_20440643_20443370_20443522_20444226_20444420_20445858_20446047_20452367_20452560_20453350_20453503_20453619_20453763_20453839_20454011_20454539_20454674_20457304_20457501_20457592_20457721_20457826_20457960_20458232_20458448_20461191_20461343_20462342_20462447_20462830_20463002_20466194_20466371_20483402
H1_mix_00028181	chr15	-	568	2	FSM	ENSG00000180229.12	ENST00000454045.1	583	2	15	0	15	0	multi-exon	FALSE	canonical	3	77	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCAGAGGTGGGTGGCC	NA	False	NA	NA	False	NA	NA	NA	20440655	20439269	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_20439656_20440473
H1_mix_00028185	chr15	-	238	3	NNC	ENSG00000180229.12	novel	4383	27	NA	NA	-15	-37629	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	38	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGCAGTCCACCTGCCTT	NA	False	NA	NA	False	NA	NA	NA	20506195	20500036	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_20500084_20505390_20505494_20506107
H1_mix_00028186	chr15	-	2813	1	FSM	ENSG00000278626.1	ENST00000613130.1	650	1	-2170	7	-2170	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGATTATCAATGATTT	NA	False	NA	NA	False	AATAAA	-9	NA	20645618	20642805	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_20642800_20645600
H1_mix_00028187	chr15	-	241	1	FSM	ENSG00000281087.1	ENST00000625294.1	622	1	292	89	292	-89	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGACAGTGTGGCTGAGCA	NA	False	NA	NA	False	NA	NA	NA	21709978	21709737	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_21709700_21710000
H1_mix_00028188	chr15	-	241	1	FSM	ENSG00000223877.4	ENST00000460876.2	622	1	296	85	296	-85	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGACAGTGTGGCTGAGCA	8306	False	NA	NA	False	NA	NA	NA	22152601	22152360	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_22152400_22152600
H1_mix_00028189	chr15	-	6826	31	FSM	ENSG00000273749.5	ENST00000617928.5	6826	31	0	0	0	0	multi-exon	TRUE	canonical	3	323	junction_12	39.2561955478226	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTCATGTGCTGAGGTCAT	-6	True	NA	NA	False	AATAAA	-14	NA	22980368	22867051	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_22870193_22872824_22872973_22873490_22873730_22874549_22874645_22875198_22875272_22879912_22880044_22881845_22881937_22882867_22883012_22892889_22892978_22903705_22903906_22909193_22909314_22910519_22910629_22910736_22910814_22912178_22912276_22914725_22914883_22916476_22916631_22917787_22917936_22918691_22918859_22925981_22926108_22927905_22928029_22932222_22932341_22933801_22933894_22937103_22937209_22939191_22939321_22939410_22939508_22943172_22943355_22944557_22944660_22944861_22944940_22947002_22947093_22947168_22947292_22980286
H1_mix_00028190	chr15	-	5674	16	FSM	ENSG00000273749.5	ENST00000617556.4	5674	16	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_12	42.8722132233299	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGTGCATTCGGCTTTTG	148	False	NA	NA	False	AATAAA	-26	NA	22917313	22867124	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_22870193_22872824_22872973_22873490_22873730_22874549_22874645_22875198_22875272_22879912_22880044_22881845_22881937_22882867_22883012_22892889_22892978_22903705_22903906_22909193_22909314_22910519_22910629_22910736_22910814_22912178_22912276_22914725_22914883_22916476
H1_mix_00028191	chr15	-	4425	31	NIC	ENSG00000273749.5	novel	6826	31	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	3	25	junction_30	78.7137994396295	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTCATTTATTTACT	9	True	NA	-21	True	AATAAA	-15	NA	22980353	22869464	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_22870193_22872824_22872973_22873490_22873730_22874549_22874645_22875198_22875272_22879912_22880044_22881845_22881937_22882867_22883012_22892889_22892978_22903705_22903906_22909193_22909314_22910519_22910629_22910736_22910814_22912178_22912276_22914725_22914883_22916476_22916631_22917787_22917936_22918691_22918859_22925981_22926108_22927905_22928029_22932222_22932341_22933801_22933894_22937103_22937209_22939191_22939321_22939410_22939508_22943172_22943355_22944557_22944660_22944861_22944940_22947002_22947093_22947168_22947319_22980286
H1_mix_00028192	chr15	-	3744	23	FSM	ENSG00000275835.5	ENST00000615383.5	3744	23	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	15.8721649384925	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTATCCTTTTGCTGC	3	True	NA	-1	True	AATAAA	-19	NA	23039569	22999176	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_22999867_23000568_23000670_23003064_23003154_23004101_23004228_23005431_23005611_23006051_23006173_23006267_23006353_23008698_23008882_23009944_23010134_23011132_23011332_23017772_23018042_23019218_23019335_23021958_23022162_23023946_23024194_23024736_23024831_23026115_23026206_23027191_23027307_23030884_23031021_23031949_23032030_23032727_23032825_23036896_23037006_23037098_23037153_23039397
H1_mix_00028195	chr15	-	1525	2	ISM	ENSG00000259414.1	ENST00000559033.1	726	4	2798	-1319	2798	1319	3prime_fragment	FALSE	canonical	3	22	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAAAGCAGAGCCCTGGC	NA	False	NA	NA	False	NA	NA	NA	23290869	23287983	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_23289476_23290836
H1_mix_00028196	chr15	-	4328	1	FSM	ENSG00000254585.5	ENST00000650528.1	4319	1	-9	0	-9	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAGTGTTTGTCTTTATT	21	False	NA	-3	True	AGTAAA	-39	NA	23647876	23643548	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_23643500_23647900
H1_mix_00028197	chr15	-	1935	1	FSM	ENSG00000182636.8	ENST00000649030.2	1906	1	-31	2	-31	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	205	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCCTTCCCTTAAGTTT	NA	False	NA	NA	False	AATAAA	-11	NA	23687336	23685401	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_23685400_23687300
H1_mix_00028198	chr15	-	3842	3	Antisense	novelGene_ENSG00000259905.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	7.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAAAGCCTGTCTGGTGG	5	True	NA	-8	True	AATAAA	-15	NA	24690730	24685402	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr15_-_24688864_24690220_24690350_24690478
H1_mix_00028199	chr15	-	894	1	FSM	ENSG00000241061.3	ENST00000460716.1	894	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACCAAACAATTTTCTAT	NA	False	NA	NA	False	NA	NA	NA	24909825	24908931	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_24908900_24909800
H1_mix_00028200	chr15	-	429	1	FSM	ENSG00000270814.1	ENST00000604899.1	340	1	136	-225	136	225	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTTCTTTGTCTTATCTG	NA	False	NA	NA	False	AATAAA	-18	NA	25169540	25169111	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_25169100_25169500
H1_mix_00028201	chr15	-	5025	11	FSM	ENSG00000114062.22	ENST00000649550.1	5025	11	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_10	90.6242793074792	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTCTTCAGTTCTCA	-10	True	NA	-19	True	AATAAA	-13	NA	25439024	25337246	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_25339258_25340084_25340229_25354352_25354427_25354527_25354684_25355891_25356057_25356690_25356897_25360382_25360528_25370565_25371813_25375464_25375764_25405460_25405503_25438488
H1_mix_00028202	chr15	-	5274	14	FSM	ENSG00000114062.22	ENST00000650110.1	5274	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_10	179.650317802086	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTCTTCAGTTCTCA	-10	True	NA	-19	True	AATAAA	-13	NA	25439024	25337246	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_25339258_25340084_25340229_25354352_25354427_25354527_25354684_25355891_25356057_25356690_25356897_25360382_25360528_25370565_25371813_25375464_25375764_25405460_25405503_25408619_25408685_25409087_25409208_25411907_25411972_25438488
H1_mix_00028203	chr15	-	8728	13	FSM	ENSG00000114062.22	ENST00000648336.2	8728	13	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_10	131.316702627232	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTGCTAGTATTTTG	-10	True	NA	1	True	CATAAA	-21	NA	25439024	25333727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_25339258_25340084_25340229_25354352_25354427_25354527_25354684_25355891_25356057_25356690_25356897_25360382_25360528_25370565_25371813_25375464_25375764_25405460_25405503_25409087_25409208_25411907_25411972_25438488
H1_mix_00028206	chr15	-	2791	10	FSM	ENSG00000206190.13	ENST00000673747.1	2999	10	8	200	8	-200	multi-exon	FALSE	canonical	2	8	junction_3	4.2687494916219	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTCCCACCCCTGCCCAG	1541	False	NA	NA	False	NA	NA	NA	25863543	25713673	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_25714242_25716729_25716925_25718181_25718400_25721656_25721910_25723890_25724022_25725950_25726083_25727159_25727267_25736055_25736142_25781018_25781224_25862647
H1_mix_00028207	chr15	-	6705	9	FSM	ENSG00000166206.15	ENST00000311550.10	5767	9	52	-990	0	984	multi-exon	FALSE	canonical	3	903	junction_1	64.4426828662494	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTGTGACACCGTCTTAC	8171	False	NA	NA	False	NA	NA	NA	26773014	26542561	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_26548135_26560931_26561177_26567580_26567734_26580318_26580457_26583331_26583415_26621313_26621535_26772401_26772470_26772680_26772773_26772882
H1_mix_00028208	chr15	-	6680	9	FSM	ENSG00000166206.15	ENST00000299267.8	4494	9	37	-2223	0	984	multi-exon	FALSE	canonical	3	228	junction_8	277.794635252375	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTGTGACACCGTCTTAC	2	True	NA	NA	False	NA	NA	NA	26773751	26542561	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_26548135_26560931_26561177_26567580_26567734_26580318_26580457_26583331_26583415_26621313_26621535_26772401_26772470_26772680_26772773_26773644
H1_mix_00028209	chr15	-	346	1	FSM	ENSG00000278840.1	ENST00000621819.1	340	1	0	-6	0	6	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTAGTGATAATGTTTAA	NA	False	NA	0	True	ATTAAA	-24	NA	26557937	26557591	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_26557600_26557900
H1_mix_00028210	chr15	-	3713	1	FSM	ENSG00000166206.15	ENST00000621499.1	3860	1	61	86	61	-86	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCGAACATTTATGTGAA	NA	False	NA	-84	True	AATAAA	-3	NA	26615656	26611943	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_26611900_26615700
H1_mix_00028211	chr15	-	15367	93	FSM	ENSG00000128731.18	ENST00000261609.13	15364	93	0	-3	0	3	multi-exon	TRUE	canonical	3	32	junction_70	52.0765486444192	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCTGAGCTTTCTTAACC	-1	False	NA	NA	False	AATAAA	-19	NA	28322179	28111036	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_28112036_28113070_28113284_28113572_28113679_28114611_28114803_28115428_28115542_28116664_28116860_28117012_28117155_28121345_28121430_28124036_28124235_28125005_28125194_28130162_28130303_28130502_28130595_28132099_28132262_28132652_28132831_28135477_28135693_28141431_28141631_28141730_28141847_28142237_28142394_28142826_28142953_28143872_28143992_28144076_28144236_28144672_28144805_28146236_28146345_28152676_28152831_28163093_28163286_28167686_28167828_28168406_28168591_28169483_28169656_28174394_28174621_28175511_28175657_28176427_28176600_28176686_28176769_28176949_28177128_28177418_28177510_28178886_28179031_28179141_28179224_28182400_28182513_28186576_28186753_28190964_28191057_28191138_28191245_28191960_28192152_28196214_28196355_28196460_28196570_28198377_28198504_28198600_28198770_28201455_28201555_28202112_28202250_28202346_28202615_28206239_28206383_28211001_28211146_28212444_28212584_28213741_28213973_28214075_28214273_28214654_28214803_28215620_28215803_28218488_28218672_28220451_28220645_28222027_28222216_28228217_28228410_28229194_28229347_28229459_28229597_28229673_28229848_28230366_28230501_28233145_28233342_28233433_28233562_28233663_28233797_28234069_28234285_28236962_28237114_28238113_28238218_28238601_28238773_28245880_28246067_28246741_28246898_28248551_28248737_28254339_28254519_28255871_28255997_28256088_28256318_28257060_28257262_28260776_28260971_28262917_28263170_28265617_28265732_28265816_28265975_28268464_28268617_28269247_28269437_28270694_28270869_28272214_28272387_28272893_28273005_28274290_28274448_28274904_28275006_28280067_28280288_28292887_28293023_28299401_28299517_28321361_28321465_28322074
H1_mix_00028213	chr15	-	931	5	ISM	ENSG00000128731.18	ENST00000261609.13	15364	93	-11	168786	-11	208	5prime_fragment	FALSE	canonical	3	67	junction_2	36.9754986443726	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTTTTTGGAGAGACAA	NA	False	NA	-16	True	AATAAA	-11	NA	28322190	28279825	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_28280288_28292887_28293023_28299401_28299517_28321361_28321465_28322074
H1_mix_00028214	chr15	-	861	3	FSM	ENSG00000128731.18	ENST00000563945.1	491	3	-46	-324	14	324	multi-exon	TRUE	canonical	3	55	junction_1	54	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTAAACATGAGTTCTAGT	13	False	NA	NA	False	AATAAA	-32	NA	28322165	28319797	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_28320465_28321361_28321465_28322074
H1_mix_00028215	chr15	-	574	1	FSM	ENSG00000260053.2	ENST00000566803.2	2184	1	1983	-373	1983	373	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATTTTAGGCCAGTTTG	NA	False	NA	NA	False	AATAAA	-7	NA	28506825	28506251	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_28506300_28506800
H1_mix_00028216	chr15	-	4960	11	FSM	ENSG00000104059.5	ENST00000261275.5	4963	11	3	0	3	0	multi-exon	FALSE	canonical	3	27	junction_7	17.3381083166532	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCTCTGAGGTCTAA	-21	True	NA	-4	True	AATAAA	-18	NA	29570976	29120251	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_29123656_29124686_29124762_29126266_29126492_29128788_29128865_29136365_29136502_29137033_29137195_29151733_29151842_29196429_29196565_29252367_29252479_29381774_29381832_29570504
H1_mix_00028217	chr15	-	4825	10	NIC	ENSG00000104059.5	novel	4963	11	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	3	25	junction_7	18.0171386171783	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGTGTCTCTGAGGTC	-24	True	NA	-7	True	AATAAA	-15	NA	29570979	29120254	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_29123656_29124686_29124762_29126266_29126492_29128788_29128865_29136365_29136502_29137033_29137195_29151733_29151842_29252367_29252479_29381774_29381832_29570504
H1_mix_00028218	chr15	-	1146	6	NNC	ENSG00000104059.5	novel	533	4	NA	NA	33	3272	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	28.3365488371467	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCACACATTGCAATCTGG	9	True	NA	-20	True	AATAAA	-2	NA	29570946	29193157	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_29193331_29195111_29195340_29196429_29196565_29252367_29252479_29381774_29381832_29570504
H1_mix_00028219	chr15	-	4834	1	FSM	ENSG00000185115.6	ENST00000332303.6	4834	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTTTTGGGGCATATA	-18	True	NA	NA	False	ATTAAA	-22	NA	29269822	29264988	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_29265000_29269800
H1_mix_00028220	chr15	-	7950	28	FSM	ENSG00000104067.17	ENST00000346128.10	7950	28	1	-1	0	1	multi-exon	FALSE	canonical	3	5	junction_9	165.494395862	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTTGAGTCTGGCTT	-41	True	NA	1	True	TATAAA	-17	NA	29822502	29699365	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_29701690_29704221_29704306_29705527_29705746_29708558_29709037_29710830_29711001_29716610_29716839_29718020_29718119_29718265_29719139_29719776_29720017_29720357_29720709_29726378_29726480_29726780_29726992_29727936_29728020_29732432_29732529_29732630_29732816_29733093_29733314_29734273_29734383_29737263_29737415_29741330_29741437_29742641_29742782_29761138_29761287_29761600_29761770_29762334_29762439_29766265_29766543_29772063_29772167_29773232_29773358_29800645_29800703_29822001
H1_mix_00028221	chr15	-	6902	27	NIC	ENSG00000104067.17	novel	7190	28	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	267	junction_1	90.5519318781433	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGGCTTGGTCTGTTTG	2	True	NA	-27	True	AATAAA	-16	NA	29822459	29700151	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_29701690_29704200_29704306_29705527_29705746_29708558_29709037_29710830_29711001_29716610_29716839_29718020_29718119_29718265_29719139_29720357_29720709_29726378_29726480_29726780_29726992_29727936_29728020_29732432_29732529_29732630_29732816_29733093_29733314_29734273_29734383_29737263_29737415_29741330_29741437_29742641_29742782_29761138_29761287_29761600_29761770_29762334_29762439_29766265_29766543_29772063_29772167_29773232_29773358_29800645_29800703_29822001
H1_mix_00028222	chr15	-	7190	28	FSM	ENSG00000104067.17	ENST00000614355.5	7190	28	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_9	168.556251371888	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGGCTTGGTCTGTTTG	-7	True	NA	-27	True	AATAAA	-16	NA	29822468	29700151	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_29701690_29704161_29704306_29705527_29705746_29708558_29709037_29710830_29711001_29716610_29716839_29718020_29718119_29718265_29719139_29719776_29720017_29720357_29720709_29726378_29726480_29726780_29726992_29727936_29728020_29732432_29732529_29732630_29732816_29733093_29733314_29734273_29734383_29737263_29737415_29741330_29741437_29742641_29742782_29761138_29761287_29761600_29761770_29762334_29762439_29766265_29766543_29772063_29772167_29773232_29773358_29800645_29800703_29822001
H1_mix_00028223	chr15	-	6329	27	FSM	ENSG00000104067.17	ENST00000677774.1	5938	27	-391	0	0	0	multi-exon	FALSE	canonical	3	213	junction_1	97.7648201510727	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTGGGGATATTTTTTT	-7	True	NA	NA	False	AAGAAA	-10	NA	29822468	29700772	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_29701690_29704161_29704306_29705527_29705746_29708558_29709037_29710830_29711001_29716610_29716839_29718020_29718119_29718265_29719139_29720357_29720709_29726378_29726480_29726780_29726992_29727936_29728020_29732432_29732529_29732630_29732816_29733093_29733314_29734273_29734383_29737263_29737415_29741330_29741437_29742641_29742782_29761138_29761287_29761600_29761770_29762334_29762439_29766265_29766543_29772063_29772167_29773232_29773358_29800645_29800703_29822001
H1_mix_00028225	chr15	-	5007	27	FSM	ENSG00000104067.17	ENST00000545208.6	5007	27	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_1	91.3231873962633	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTTGAAATATAGGAACTT	433	False	NA	-67	True	NA	NA	NA	29822028	29701594	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_29701690_29704221_29704306_29705527_29705746_29708558_29709037_29710830_29711001_29716610_29716839_29718020_29718119_29718265_29719139_29720357_29720709_29726378_29726480_29726780_29726992_29727936_29728020_29732432_29732529_29732630_29732816_29733093_29733314_29734273_29734383_29737263_29737415_29741330_29741437_29742641_29742782_29761138_29761287_29761600_29761770_29762334_29762439_29766265_29766543_29772063_29772167_29773232_29773358_29800645_29800703_29822001
H1_mix_00028228	chr15	-	3398	10	FSM	ENSG00000166664.15	ENST00000299847.7	3411	10	13	0	13	0	multi-exon	FALSE	canonical	1	2	junction_7	11.4449838060605	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCTCACTCATTTCTGG	11	False	NA	NA	False	AATAAA	-22	NA	30393527	30360565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_30362812_30367417_30367528_30371097_30371185_30372146_30372342_30372977_30373146_30377029_30377110_30380352_30380400_30383318_30383383_30386862_30386988_30393251
H1_mix_00028229	chr15	-	4985	16	FSM	ENSG00000166912.17	ENST00000435680.6	4985	16	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	11.2380306697096	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTTGTCAGTATGAAAT	-7	True	NA	-16	True	AATAAA	-18	NA	30991628	30938940	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_30942073_30942889_30943073_30947129_30947301_30948301_30948472_30951967_30952039_30953561_30953632_30954762_30954894_30958862_30958952_30959033_30959122_30960880_30961074_30967919_30968011_30974313_30974457_30974930_30975004_30976818_30976956_30990776_30990838_30991446
H1_mix_00028230	chr15	-	5686	14	FSM	ENSG00000166912.17	ENST00000568604.5	5679	14	0	-7	0	0	multi-exon	FALSE	canonical	3	4	junction_9	16.3276365704388	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTTGTCAGTATGAAAT	18	True	NA	-16	True	AATAAA	-18	NA	30991603	30938940	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_30943073_30947129_30947301_30948301_30948472_30951967_30952039_30953561_30953632_30954762_30954894_30958862_30958952_30959033_30959122_30960880_30961074_30974313_30974457_30974930_30975004_30976818_30976956_30990776_30990838_30991446
H1_mix_00028233	chr15	-	5405	14	NIC	ENSG00000169918.10	novel	3501	14	NA	NA	-27	1856	combination_of_known_junctions	FALSE	canonical	2	9	junction_13	7.57370099393699	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCACGCTATCTGCCAG	84	False	NA	NA	False	NA	NA	NA	31870704	31481110	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_31484725_31487193_31487279_31487451_31487567_31501689_31501840_31503690_31503819_31526348_31526462_31527180_31527309_31530706_31530809_31558968_31559188_31570017_31570198_31655095_31655251_31656982_31657078_31689358_31689482_31870506
H1_mix_00028235	chr15	-	1633	6	FSM	ENSG00000169857.9	ENST00000306730.8	1633	6	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_4	15.0811140172071	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTCCTTTCCTTTCTTGT	-69	True	NA	-3	True	AATAAA	-19	NA	34039204	33866226	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_33866729_33867494_33867856_33870934_33871031_33875924_33875996_34003031_34003210_34038779
H1_mix_00028236	chr15	-	1023	5	FSM	ENSG00000134153.10	ENST00000528949.1	506	5	-120	-397	-65	50	multi-exon	FALSE	canonical	3	34	junction_4	266.722116630774	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATTATCTGAGGCTTGAA	-4	True	NA	50	True	NA	NA	NA	34101927	34083966	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34084487_34088052_34088134_34090316_34090456_34095894_34096015_34101764
H1_mix_00028237	chr15	-	1069	5	FSM	ENSG00000134153.10	ENST00000256545.9	1069	5	0	0	0	0	multi-exon	FALSE	canonical	3	613	junction_1	29.8202951024969	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTTTCTTTTTTTTTAC	1	True	NA	0	True	ATTAAA	-23	NA	34101862	34084016	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34084487_34088052_34088134_34090316_34090456_34095894_34096015_34101603
H1_mix_00028239	chr15	-	390	1	FSM	ENSG00000243094.1	ENST00000487972.1	404	1	1	13	1	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGGAAAAGGAATCAACGG	NA	False	NA	NA	False	NA	NA	NA	34086313	34085923	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34085900_34086300
H1_mix_00028240	chr15	-	3091	10	FSM	ENSG00000134152.11	ENST00000256544.8	2740	10	85	-436	0	436	multi-exon	FALSE	canonical	3	306	junction_2	42.5858609817338	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAGAAAAATTAAGTACAAA	90	False	NA	NA	False	AATAAA	-8	NA	34210011	34140237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34142372_34145397_34145492_34146760_34146851_34147199_34147290_34147379_34147431_34148631_34148751_34152789_34153070_34154643_34154685_34163559_34163691_34209950
H1_mix_00028241	chr15	-	717	6	FSM	ENSG00000134152.11	ENST00000559760.5	733	6	0	16	0	-16	multi-exon	FALSE	canonical	3	12	junction_1	125.681183953685	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAATCACAGTGAATTTG	6079	False	NA	-14	True	NA	NA	NA	34148750	34144979	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34145253_34145397_34145492_34146760_34146851_34147199_34147290_34147379_34147431_34148631
H1_mix_00028242	chr15	-	725	5	FSM	ENSG00000134152.11	ENST00000560308.5	725	5	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_1	26.6176633084123	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTAAGTGCTAATCTGAA	-2	True	NA	NA	False	AGTAAA	-25	NA	34154831	34147202	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34147290_34147379_34147431_34148631_34148751_34152789_34153070_34154643
H1_mix_00028245	chr15	-	7286	25	FSM	ENSG00000140199.13	ENST00000290209.9	7286	25	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_24	5.79990421376844	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGGGTTATGGTATAGT	20	True	NA	-7	True	AATAAA	-20	NA	34318779	34229995	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34233973_34235180_34235315_34236014_34236200_34236707_34236816_34237418_34237551_34238231_34238402_34238964_34239161_34240660_34240830_34241232_34241338_34242101_34242222_34243973_34244073_34245284_34245404_34245692_34245868_34250297_34250356_34250630_34250730_34250898_34251058_34252169_34252385_34254347_34254590_34255261_34255393_34256228_34256284_34257641_34257789_34258812_34258945_34260925_34261021_34275344_34275390_34318560
H1_mix_00028247	chr15	-	507	2	FSM	ENSG00000182117.6	ENST00000328848.6	507	2	0	0	0	0	multi-exon	FALSE	canonical	3	5576	junction_1	0	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTATTTTGTGAGTTGTT	4	True	NA	-6	True	ATTAAA	-20	NA	34343136	34341718	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34342109_34343019
H1_mix_00028248	chr15	-	2177	14	FSM	ENSG00000176454.15	ENST00000314891.11	2165	14	0	-12	0	12	multi-exon	FALSE	canonical	3	99	junction_3	22.8151823218378	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATATTTAATAATCCTAC	-20	True	NA	NA	False	ATTAAA	-25	NA	34367196	34358620	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34359303_34359588_34359746_34360110_34360210_34361399_34361533_34362195_34362322_34362572_34362656_34362781_34362837_34363421_34363457_34363660_34363720_34364012_34364074_34364193_34364307_34365007_34365229_34365558_34365702_34366986
H1_mix_00028249	chr15	-	1361	5	FSM	ENSG00000176454.15	ENST00000563748.5	1357	5	0	-4	0	4	multi-exon	FALSE	canonical	3	99	junction_2	30.5399328748444	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGATGTTACCATTACTT	5057	False	NA	NA	False	ATTAAA	-19	NA	34362655	34358904	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34359303_34359588_34360210_34361399_34361533_34362195_34362322_34362572
H1_mix_00028250	chr15	-	1949	15	NNC	ENSG00000176454.15	novel	2165	14	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_3	48.2459684262608	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATATTGATGTTACCATT	-19	True	NA	NA	False	ATTAAA	-15	NA	34367195	34358908	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_34359303_34359588_34359746_34360110_34360210_34361168_34361230_34361399_34361533_34362195_34362322_34362572_34362656_34362781_34362837_34363421_34363457_34363660_34363720_34364012_34364074_34364193_34364307_34365007_34365229_34365558_34365702_34366986
H1_mix_00028253	chr15	-	1063	1	FSM	ENSG00000259904.1	ENST00000570019.1	1063	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGACTGTTACTTAGTTGT	4627	False	NA	NA	False	NA	NA	NA	34374603	34373540	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34373500_34374600
H1_mix_00028254	chr15	-	6236	23	FSM	ENSG00000175265.18	ENST00000473125.5	6233	23	0	-3	0	3	multi-exon	FALSE	canonical	3	17	junction_16	58.3044871612854	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTTTGCCTTAAAATTT	NA	False	NA	-13	True	AATAAA	-22	NA	34407687	34379064	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34381614_34381700_34381857_34381967_34382069_34382150_34382252_34382385_34382530_34382796_34383054_34383440_34383529_34383745_34383854_34383960_34384048_34385047_34385158_34385253_34385339_34385426_34385475_34385739_34385779_34386624_34387953_34389643_34389769_34391122_34391266_34391352_34391427_34398633_34398730_34399154_34399204_34400711_34400760_34404916_34405056_34406673_34406871_34407523
H1_mix_00028255	chr15	-	6868	24	NIC	ENSG00000175265.18	novel	5777	25	NA	NA	0	0	intron_retention	FALSE	canonical	3	41	junction_23	58.3638285578658	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTTTTTGCCTTAAAA	9	True	NA	-16	True	AATAAA	-19	NA	34437808	34379067	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_34381614_34381700_34381857_34381967_34382069_34382150_34382252_34382385_34382530_34382796_34383054_34383440_34383529_34383745_34383854_34383960_34384048_34385047_34385158_34385253_34385339_34385426_34385475_34385739_34385779_34386624_34387953_34389643_34389769_34391122_34391427_34398633_34398730_34399154_34399204_34400711_34400760_34404916_34405056_34406673_34406871_34407523_34407736_34435382_34435472_34437397
H1_mix_00028256	chr15	-	5780	25	FSM	ENSG00000175265.18	ENST00000359187.5	5777	25	0	-3	0	3	multi-exon	FALSE	canonical	3	18	junction_14	62.2352168970449	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTTTGCCTTAAAATTT	9	True	NA	-13	True	AATAAA	-22	NA	34437808	34379064	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34381614_34381700_34381857_34381967_34382069_34382150_34382252_34382385_34382530_34382796_34383054_34383440_34383529_34383745_34383854_34383960_34384048_34385047_34385158_34385253_34385339_34385426_34385475_34385739_34385779_34386624_34386742_34387832_34387953_34389643_34389769_34391122_34391427_34398633_34398730_34399154_34399204_34400711_34400760_34404916_34405056_34406673_34406871_34407523_34407736_34435382_34435472_34437397
H1_mix_00028258	chr15	-	4967	1	FSM	ENSG00000279092.1	ENST00000623619.1	4824	1	31	-174	31	174	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAACAGATTTTTCATTG	NA	False	NA	NA	False	NA	NA	NA	34420242	34415275	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34415300_34420200
H1_mix_00028259	chr15	-	2058	1	FSM	ENSG00000259917.1	ENST00000568980.1	1570	1	-156	-332	-156	332	mono-exon	FALSE	NA	NA	NA	NA	NA	212	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTTGCTGGGAAAAAAAGAA	16	False	NA	NA	False	AATAAA	-24	NA	34490727	34488669	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34488700_34490700
H1_mix_00028260	chr15	-	4061	11	ISM	ENSG00000215252.12	ENST00000438958.2	4252	15	1615	-185	1331	-2	3prime_fragment	FALSE	canonical	3	121	junction_5	34.6555911794908	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTATGGGGTGAAAAAGT	4364	False	NA	NA	False	AATAAA	-19	NA	34531645	34525096	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_34527835_34527921_34528078_34528188_34528290_34528371_34528473_34528606_34528751_34529017_34529275_34529661_34529750_34529966_34530075_34530181_34530269_34531268_34531379_34531474
H1_mix_00028261	chr15	-	5606	24	FSM	ENSG00000215252.12	ENST00000683415.1	5607	24	0	1	0	-1	multi-exon	FALSE	canonical	3	18	junction_14	51.2430732097996	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTATGGGGTGAAAAAGTT	-12	True	NA	NA	False	AATAAA	-20	NA	34583651	34525095	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34527835_34527921_34528078_34528188_34528290_34528371_34528473_34528606_34528751_34529017_34529275_34529661_34529750_34529966_34530075_34530181_34530269_34531268_34531379_34531474_34531560_34531647_34531696_34531960_34532000_34532845_34532963_34534053_34534174_34535864_34535990_34537343_34537648_34544857_34544954_34545377_34545427_34546934_34546983_34551137_34551277_34552894_34553092_34553744_34553957_34583515
H1_mix_00028262	chr15	-	4335	16	FSM	ENSG00000215252.12	ENST00000342314.9	4335	16	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_14	51.831521940482	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGGCATGCTTGGCATG	-1	False	NA	-6	True	ATTAAA	-20	NA	34536010	34525206	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34527835_34527921_34528078_34528188_34528290_34528371_34528473_34528606_34528751_34529017_34529275_34529661_34529750_34529966_34530075_34530181_34530269_34531268_34531379_34531474_34531560_34531647_34531696_34531960_34532000_34532845_34532963_34534053_34534174_34535864
H1_mix_00028263	chr15	-	6676	23	FSM	ENSG00000215252.12	ENST00000484716.5	6114	23	-4	-558	-4	-1	multi-exon	FALSE	canonical	3	43	junction_22	45.8300174107295	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTATGGGGTGAAAAAGTT	12	True	NA	NA	False	AATAAA	-20	NA	34582864	34525095	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34527835_34527921_34528078_34528188_34528290_34528371_34528473_34528606_34528751_34529017_34529275_34529661_34529750_34529966_34530075_34530181_34530269_34531268_34531379_34531474_34531560_34531647_34531696_34531960_34532000_34532845_34534174_34535864_34535990_34537343_34537648_34544857_34544954_34545377_34545427_34546934_34546983_34551137_34551277_34552894_34553092_34553744_34553957_34582749
H1_mix_00028264	chr15	-	1394	7	FSM	ENSG00000159251.8	ENST00000290378.6	1382	7	0	-12	0	12	multi-exon	FALSE	canonical	3	124	junction_6	41.4919670940452	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTTTTGGGGTAGGCG	-1	True	NA	NA	False	AATAAA	-35	NA	34795549	34790217	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34790556_34791113_34791296_34792089_34792282_34792407_34792570_34793244_34793570_34794679_34794831_34795505
H1_mix_00028265	chr15	-	696	2	FSM	ENSG00000159251.8	ENST00000560563.1	696	2	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTCAACAAATATCCTTCC	3026	False	NA	NA	False	ATTAAA	-42	NA	34792522	34791700	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34792282_34792407
H1_mix_00028266	chr15	-	9598	35	FSM	ENSG00000021776.11	ENST00000156471.10	9597	35	0	-1	0	1	multi-exon	FALSE	canonical	3	266	junction_23	38.1324068192265	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCTGGCTTTCTGTTCTT	-14	True	NA	-3	True	AGTAAA	-22	NA	34969742	34851780	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34857107_34860041_34860156_34862866_34863042_34867523_34867610_34870751_34870923_34873827_34874000_34874676_34874865_34875934_34876007_34882501_34882640_34884524_34884735_34886525_34886662_34890214_34890325_34893662_34893774_34896896_34896967_34897558_34897706_34900621_34900864_34904335_34904506_34906544_34906713_34910134_34910314_34915037_34915180_34918257_34918379_34920331_34920435_34927034_34927139_34930257_34930372_34932317_34932435_34934570_34934636_34938736_34938814_34940898_34941000_34942011_34942081_34944287_34944429_34948263_34948385_34952884_34952921_34960773_34960815_34964233_34964291_34969538
H1_mix_00028267	chr15	-	8462	4	FSM	ENSG00000021776.11	ENST00000559090.5	3637	4	-106	-4719	-106	1	multi-exon	TRUE	canonical	3	338	junction_2	17.7200451466693	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCTGGCTTTCTGTTCTT	NA	False	NA	-3	True	AGTAAA	-22	NA	34870370	34851780	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34857107_34860041_34860156_34862866_34863042_34867523
H1_mix_00028269	chr15	-	5440	3	FSM	ENSG00000198146.4	ENST00000356321.4	5439	3	0	-1	0	1	multi-exon	FALSE	canonical	3	1186	junction_1	17.5	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGCCTTTTTTTTGGGGG	-17	True	NA	-2	True	AATAAA	-17	NA	34988287	34978339	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34983491_34987556_34987674_34988115
H1_mix_00028270	chr15	-	1013	3	FSM	ENSG00000289289.1	ENST00000692204.1	530	3	10	-493	10	493	multi-exon	FALSE	canonical	3	15	junction_1	1	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATGTCCATTTATTCTG	3	True	NA	0	True	ATTAAA	-18	NA	35062151	35056041	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_35056941_35061939_35062000_35062097
H1_mix_00028271	chr15	-	1886	1	FSM	ENSG00000255192.6	ENST00000528386.4	1886	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCCTAATTTGTTGGTTG	0	True	NA	-146	True	NA	NA	NA	35085295	35083409	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_35083400_35085300
H1_mix_00028272	chr15	-	4862	2	Intergenic	novelGene_465	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	460	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAGGAAATTCACAGGGT	NA	False	NA	NA	False	NA	NA	NA	35243812	35238824	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_-_35239508_35239633
H1_mix_00028273	chr15	-	4795	3	Intergenic	novelGene_466	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	51	junction_2	204.5	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTAGGGGAGCTTCTGA	NA	False	NA	NA	False	NA	NA	NA	35243812	35238849	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_-_35239508_35239633_35239828_35239869
H1_mix_00028274	chr15	-	2101	9	FSM	ENSG00000134146.12	ENST00000256538.9	2098	9	0	-3	0	3	multi-exon	FALSE	canonical	1	64	junction_1	44.7267746992783	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTGTGTGAAGATAAGT	7	True	NA	-1	True	AATAAA	-25	NA	35546165	35370876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_35372204_35373520_35373609_35381821_35381917_35410834_35410897_35450684_35450804_35454746_35454821_35538273_35538468_35542412_35542508_35546118
H1_mix_00028276	chr15	-	2796	12	NIC	ENSG00000134138.20	novel	3056	13	NA	NA	22	305	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	1.43739893644017	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCCTCTGCCAGAATAAAG	3942	False	NA	NA	False	GATAAA	-13	NA	37097345	36890715	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_36892460_36894716_36894813_36895150_36895241_36896627_36896687_36950323_36950401_37036813_37036960_37083770_37083886_37093580_37093731_37094526_37094578_37095563_37095615_37096288_37096431_37097270
H1_mix_00028277	chr15	-	554	3	FSM	ENSG00000134138.20	ENST00000561264.6	554	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGACTTTCTGAACTTT	1708	False	NA	NA	False	NA	NA	NA	36895278	36892129	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_36892460_36894716_36894813_36895150
H1_mix_00028279	chr15	-	1901	1	FSM	ENSG00000236914.4	ENST00000560198.1	942	1	-335	-624	-304	-32	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCAAACATGAATCATGTT	NA	False	NA	NA	False	NA	NA	NA	38073294	38071393	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_38071400_38073300
H1_mix_00028280	chr15	-	5038	17	FSM	ENSG00000172575.13	ENST00000310803.10	5031	17	0	-7	0	7	multi-exon	FALSE	canonical	2	8	junction_5	4.11504480534538	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTGTGTTTCTTCTGCTT	-19	True	NA	6	True	GATAAA	-28	NA	38564814	38488095	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_38490689_38494381_38494768_38498793_38498947_38500102_38500140_38501142_38501288_38502311_38502422_38503271_38503377_38505839_38505921_38507725_38508002_38511603_38511721_38512782_38512957_38516196_38516351_38518291_38518424_38519308_38519372_38526298_38526405_38559820_38560006_38564593
H1_mix_00028281	chr15	-	1723	2	FSM	ENSG00000259345.7	ENST00000558277.1	789	2	-308	-626	-42	626	multi-exon	FALSE	canonical	3	8	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTCTAGAATTCCGTGT	6872	False	NA	-10	True	AATAAA	-22	NA	39421017	39418403	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_39419653_39420543
H1_mix_00028283	chr15	-	3912	3	FSM	ENSG00000166073.11	ENST00000561100.2	3912	3	0	0	0	0	multi-exon	FALSE	canonical	3	521	junction_2	96	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGTTTTATGAGCTATA	-4	True	NA	7	True	AATAAA	-28	NA	39920266	39799007	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_39802255_39807005_39807259_39919854
H1_mix_00028284	chr15	-	4317	2	NIC	ENSG00000166073.11	novel	3912	3	NA	NA	-658	0	combination_of_known_splicesites	FALSE	canonical	3	345	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGTTTTATGAGCTATA	15	True	NA	7	True	AATAAA	-28	NA	39920924	39799007	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_39802255_39919854
H1_mix_00028285	chr15	-	1119	5	FSM	ENSG00000140319.11	ENST00000267884.11	1119	5	0	0	0	0	multi-exon	FALSE	canonical	3	6703	junction_4	794.831546618527	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTCATTACAGCCAAGGG	-11	True	NA	45	True	NA	NA	NA	40039181	40035689	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40036501_40036985_40037019_40038281_40038395_40038875_40038949_40039092
H1_mix_00028286	chr15	-	780	4	FSM	ENSG00000140319.11	ENST00000558720.5	780	4	0	0	0	0	multi-exon	FALSE	canonical	3	7479	junction_1	651.114087971959	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGTCTCTTTATTCCT	120	False	NA	-14	True	ATTAAA	-15	NA	40039050	40036041	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40036501_40036985_40037019_40038281_40038395_40038875
H1_mix_00028288	chr15	-	4651	5	NIC	ENSG00000104081.14	novel	4692	5	NA	NA	11	0	intron_retention	FALSE	canonical	2	4	junction_4	20.1912728672563	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCTTTTATTTTTCAA	9	True	NA	-1	True	AATAAA	-16	NA	40108867	40087889	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_40091889_40104179_40104341_40105794_40106092_40108258_40108358_40108772
H1_mix_00028289	chr15	-	4692	5	FSM	ENSG00000104081.14	ENST00000354670.9	4692	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	10.356157588604	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCTTTTATTTTTCAA	-3	True	NA	-1	True	AATAAA	-16	NA	40108879	40087889	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40091889_40104179_40104341_40105794_40106092_40108258_40108387_40108772
H1_mix_00028290	chr15	-	4632	4	FSM	ENSG00000104081.14	ENST00000397573.5	4545	4	-89	2	-89	-2	multi-exon	FALSE	canonical	3	11	junction_3	19.2006944318862	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATCTGGTCTTTTATTT	2373	False	NA	-6	True	AATAAA	-11	NA	40106537	40087894	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40091889_40104179_40104341_40105794_40106092_40106357
H1_mix_00028291	chr15	-	4566	1	FSM	ENSG00000230778.2	ENST00000434396.2	4693	1	28	99	28	-99	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGACATGCACACCCTT	13	True	NA	-98	True	NA	NA	NA	40283036	40278470	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40278500_40283000
H1_mix_00028292	chr15	-	1561	7	ISM	ENSG00000137841.12	ENST00000557821.5	4517	32	16508	-2	0	1	3prime_fragment	FALSE	canonical	3	29	junction_6	6.83130051063973	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTTAAGCCTGGTCTC	6590	False	NA	-8	True	ATTAAA	-19	NA	40291329	40287906	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_40288919_40289271_40289359_40290024_40290083_40290576_40290673_40290760_40290838_40291017_40291184_40291264
H1_mix_00028293	chr15	-	1642	6	FSM	ENSG00000137841.12	ENST00000559381.5	1641	6	0	-1	0	1	multi-exon	FALSE	canonical	3	31	junction_1	6.04648658313239	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTTAAGCCTGGTCTC	6590	False	NA	-8	True	ATTAAA	-19	NA	40291329	40287906	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40288919_40289271_40289359_40290024_40290083_40290576_40290673_40290760_40290838_40291017
H1_mix_00028294	chr15	-	543	5	FSM	ENSG00000137841.12	ENST00000558505.5	543	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	20.5791156272567	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGCCAGGCCAGAGTCTGA	6589	False	NA	NA	False	NA	NA	NA	40291330	40288571	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40288643_40289271_40289359_40290024_40290083_40290576_40290838_40291264
H1_mix_00028296	chr15	-	382	4	FSM	ENSG00000137841.12	ENST00000561378.1	553	4	0	171	0	-171	multi-exon	FALSE	canonical	3	4	junction_3	2.16024689946929	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCAGGGGCTCACCAGAG	4297	False	NA	NA	False	NA	NA	NA	40293622	40292044	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40292159_40292338_40292444_40292925_40293026_40293559
H1_mix_00028297	chr15	-	318	3	FSM	ENSG00000137841.12	ENST00000558409.2	432	3	114	0	114	0	multi-exon	FALSE	canonical	2	4	junction_2	2.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCTGGATGAAGAAGAGA	314	False	NA	NA	False	NA	NA	NA	40297605	40296564	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40296635_40296745_40296909_40297520
H1_mix_00028299	chr15	-	1505	4	FSM	ENSG00000128891.16	ENST00000416810.7	1509	4	4	0	-3	0	multi-exon	FALSE	canonical	3	49	junction_1	5.71547606649408	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCAGTGTCTGTGGTGCTG	-16	True	NA	-4	True	TATAAA	-17	NA	40565038	40553098	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40554128_40557215_40557373_40562771_40563028_40564975
H1_mix_00028300	chr15	-	340	3	FSM	ENSG00000128891.16	ENST00000560109.1	343	3	0	3	0	-3	multi-exon	FALSE	canonical	0	0	junction_1	28	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACACATTTTCAGTACCC	-13	True	NA	NA	False	TTTAAA	-10	NA	40565035	40561983	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40562008_40562771_40563028_40564975
H1_mix_00028301	chr15	-	718	3	FSM	ENSG00000245849.8	ENST00000533146.5	718	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGCTGGACGGAACAGAG	2	True	NA	NA	False	NA	NA	NA	40695096	40686723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40687147_40694585_40694796_40695011
H1_mix_00028302	chr15	-	1115	2	FSM	ENSG00000245849.8	ENST00000499988.2	1151	2	7	29	1	-29	multi-exon	FALSE	canonical	3	9	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACCCCATATCTCAAAAAAA	-2	True	NA	NA	False	NA	NA	NA	40695100	40693769	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40694796_40695011
H1_mix_00028304	chr15	-	2129	13	NIC	ENSG00000137824.16	novel	2246	13	NA	NA	0	0	intron_retention	TRUE	canonical	3	31	junction_12	39.3032194044655	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGCTCTTTATTCTTACT	-12	True	NA	-17	True	AATAAA	-15	NA	40755254	40735887	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_40736595_40737123_40737205_40737287_40737342_40737627_40737727_40737964_40738043_40738500_40738577_40740132_40740194_40744046_40744150_40744976_40745260_40751425_40751570_40751985_40752179_40754596_40754791_40755198
H1_mix_00028305	chr15	-	2246	13	FSM	ENSG00000137824.16	ENST00000338376.8	2246	13	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_10	17.095117886565	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTCTTTATTCTTACTT	-12	True	NA	-16	True	AATAAA	-16	NA	40755254	40735886	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40736595_40737123_40737205_40737287_40737342_40737627_40737727_40737964_40738043_40738500_40738577_40740132_40740194_40744046_40744150_40744976_40745260_40751425_40751570_40751985_40752179_40754596_40754791_40755082
H1_mix_00028306	chr15	-	2541	12	FSM	ENSG00000137824.16	ENST00000260385.10	3138	12	594	3	-3	0	multi-exon	FALSE	canonical	3	124	junction_10	16.697602143882	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTCTTTATTCTTACTT	-15	True	NA	-16	True	AATAAA	-16	NA	40755257	40735886	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40736595_40737123_40737205_40737287_40737342_40737627_40737727_40737964_40738043_40738500_40738577_40740132_40740194_40744046_40744150_40744976_40745260_40751425_40751570_40751985_40752179_40754596
H1_mix_00028307	chr15	-	3721	11	FSM	ENSG00000104129.10	ENST00000220496.9	3721	11	0	0	0	0	multi-exon	TRUE	canonical	3	205	junction_6	13.6091880727691	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAATCACTTTGGGGGGC	-6	True	NA	NA	False	AATAAA	-19	NA	40807473	40765160	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40768063_40773726_40773838_40774355_40774437_40775030_40775109_40775552_40775597_40776195_40776293_40776541_40776628_40779222_40779311_40779544_40779604_40779927_40779998_40807368
H1_mix_00028309	chr15	-	643	3	FSM	ENSG00000261183.6	ENST00000564302.5	643	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	55.5	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGGAATGCATTCACTG	3	True	NA	-1	True	AATAAA	-24	NA	40844387	40835992	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40836283_40838542_40838687_40844178
H1_mix_00028310	chr15	-	470	2	FSM	ENSG00000261183.6	ENST00000568525.2	579	2	109	0	-16	0	multi-exon	FALSE	canonical	3	158	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAAAAGCCCACTAATTC	90	False	NA	73	True	AATAAA	-19	NA	40844300	40838338	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40838687_40844178
H1_mix_00028311	chr15	-	1646	3	FSM	ENSG00000104140.7	ENST00000220507.5	1650	3	0	4	0	-4	multi-exon	FALSE	canonical	3	19	junction_2	3.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGGCGTGCGTTGTCTCT	-4	True	NA	-7	True	AATAAA	-13	NA	40874234	40872217	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40873502_40873683_40873743_40873931
H1_mix_00028312	chr15	-	6364	36	FSM	ENSG00000128908.18	ENST00000648947.1	6365	36	0	1	0	-1	multi-exon	FALSE	canonical	3	56	junction_28	9.88612715900831	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGAGGTGTCTGTGGTCTT	-25	True	NA	-1	True	AATAAA	-25	NA	41116280	40978880	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40980441_40982861_40983078_40983761_40983922_40984196_40984353_40985337_40985427_40987090_40987194_40987815_40987975_40997528_40997602_41005592_41005688_41016087_41016216_41020899_41021126_41027595_41027737_41044903_41045076_41047407_41047502_41048211_41048277_41049286_41049421_41049934_41050103_41053928_41054015_41055246_41055365_41056621_41056707_41058638_41058782_41059866_41059927_41069569_41069666_41070466_41070548_41071848_41072059_41073427_41073496_41074369_41074566_41079700_41079905_41081019_41081074_41085368_41085584_41087561_41087683_41092026_41092183_41095600_41095669_41095758_41095929_41096167_41096354_41115972
H1_mix_00028313	chr15	-	5991	37	FSM	ENSG00000128908.18	ENST00000401393.7	5991	37	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	15.5196013058119	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTATGTAAATTGAGGT	-2	True	NA	-13	True	AATAAA	-13	NA	41116153	40978892	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40979258_40979491_40980441_40982861_40983078_40983761_40983922_40984196_40984353_40985337_40985427_40987090_40987194_40987815_40987975_40997528_40997602_41005592_41005688_41016087_41016216_41020899_41021126_41027595_41027737_41044903_41045076_41047407_41047502_41048211_41048277_41049286_41049421_41049934_41050103_41053928_41054015_41055246_41055365_41056621_41056707_41058638_41058782_41059866_41059927_41069569_41069666_41070466_41070548_41071848_41072059_41073427_41073496_41074369_41074566_41079700_41079905_41081019_41081074_41085368_41085584_41087561_41087683_41092026_41092183_41095600_41095669_41095758_41095929_41096167_41096354_41115972
H1_mix_00028314	chr15	-	1252	5	FSM	ENSG00000104147.9	ENST00000220514.8	1201	5	0	-51	0	51	multi-exon	FALSE	canonical	3	428	junction_2	23.8012604708238	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGCAATGATAAAACGAAACA	-14	True	NA	NA	False	AATGAA	-1	NA	41332591	41309221	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_41309850_41313272_41313355_41319657_41319781_41331914_41331982_41332239
H1_mix_00028315	chr15	-	485	4	FSM	ENSG00000104147.9	ENST00000560640.1	485	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	208.864123827483	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTGATCCTGTACCAAA	90	False	NA	NA	False	AATGAA	-39	NA	41332487	41309761	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_41309850_41313272_41313355_41331914_41331982_41332239
H1_mix_00028317	chr15	-	1355	5	FSM	ENSG00000137806.10	ENST00000560978.2	1364	5	27	-18	0	18	multi-exon	FALSE	canonical	3	62	junction_4	33.4888040992807	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCCGAGTAGCTGGGATT	-3	True	NA	NA	False	NA	NA	NA	41402492	41387199	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_41387594_41388447_41388523_41394858_41395045_41396486_41397141_41402446
H1_mix_00028318	chr15	-	1469	4	FSM	ENSG00000137806.10	ENST00000679240.1	1469	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	59.0987873536054	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	29	True	NA	NA	False	NA	NA	NA	41402460	41394046	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_41394359_41394858_41395045_41396486_41397141_41402143
H1_mix_00028319	chr15	-	1712	4	FSM	ENSG00000103932.12	ENST00000565167.1	1712	4	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_3	21.2968437932844	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATCTGGACTGATTTCA	NA	False	NA	-4	True	AATAAA	-21	NA	41521791	41517175	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_41517692_41517797_41518183_41520390_41521148_41521737
H1_mix_00028320	chr15	-	4663	25	FSM	ENSG00000103932.12	ENST00000304330.9	4663	25	0	0	0	0	multi-exon	TRUE	canonical	3	229	junction_24	29.04115853214	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATCTGGACTGATTTCA	3	True	NA	-4	True	AATAAA	-21	NA	41544257	41517175	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_41517692_41517797_41517858_41518005_41518183_41520390_41521148_41521737_41521881_41522097_41522251_41522764_41522961_41523244_41523355_41523770_41523973_41524095_41524255_41524990_41525149_41526897_41527069_41527166_41527302_41527422_41527606_41527859_41528028_41528234_41528337_41529469_41529569_41529863_41529980_41531022_41531203_41534713_41534936_41535511_41535633_41536128_41536219_41536500_41536650_41536944_41537202_41544218
H1_mix_00028327	chr15	-	6464	6	FSM	ENSG00000103966.11	ENST00000220325.9	6401	6	-62	-1	-62	1	multi-exon	TRUE	canonical	3	369	junction_4	32.9824195595169	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACTTGAGATTTTAGTT	NA	False	NA	NA	False	AATAAA	-31	NA	41972619	41895931	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_41901182_41909698_41909864_41919209_41919623_41943066_41943165_41953763_41953941_41972258
H1_mix_00028329	chr15	-	4832	25	FSM	ENSG00000166887.16	ENST00000318006.10	4832	25	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_6	24.3441756666536	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTCTCTTATTTCTCC	-3	True	NA	NA	False	AATAAA	-27	NA	42208304	42158700	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_42160830_42161681_42161774_42162031_42162167_42162331_42162482_42163349_42163396_42163625_42163729_42164357_42164487_42164995_42165114_42165717_42165817_42166158_42166233_42166562_42166650_42166771_42166914_42167393_42167538_42169723_42169867_42173722_42173853_42178217_42178339_42178449_42178571_42184516_42184701_42187270_42187364_42187757_42187857_42189113_42189209_42191124_42191168_42191495_42191561_42199895_42199962_42208080
H1_mix_00028333	chr15	-	2867	20	NNC	ENSG00000103978.16	novel	2964	20	NA	NA	11	-80	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	59.2013326195747	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTATTTTTCTCATTT	8	True	NA	NA	False	TATAAA	-15	NA	42273421	42210531	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_42211750_42217802_42217834_42218322_42218379_42219580_42219643_42220061_42220136_42226805_42226910_42227710_42227770_42228711_42228817_42231187_42231261_42233212_42233307_42236319_42236420_42237431_42237616_42239669_42239732_42244049_42244168_42260957_42261003_42261195_42261250_42264089_42264204_42267946_42268033_42272062_42272124_42273254
H1_mix_00028334	chr15	-	2881	20	NIC	ENSG00000103978.16	novel	2964	20	NA	NA	0	-80	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	77.1424196443647	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTATTTTTCTCATTT	-3	True	NA	NA	False	TATAAA	-15	NA	42273432	42210531	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_42211750_42217802_42217834_42218322_42218379_42219580_42219643_42220061_42220136_42226805_42226910_42227710_42227770_42228711_42228821_42231843_42231916_42233212_42233307_42236319_42236420_42237431_42237616_42239669_42239732_42244049_42244168_42260957_42261003_42261195_42261250_42264089_42264204_42267946_42268033_42272062_42272124_42273254
H1_mix_00028335	chr15	-	2964	20	FSM	ENSG00000103978.16	ENST00000389834.9	2964	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	59.2013326195747	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGATTGTCTTATTTTC	-4	True	NA	NA	False	NA	NA	NA	42273433	42210446	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_42211750_42217802_42217834_42218322_42218379_42219580_42219643_42220061_42220136_42226805_42226910_42227710_42227770_42228711_42228821_42231191_42231261_42233212_42233307_42236319_42236420_42237431_42237616_42239669_42239732_42244049_42244168_42260957_42261003_42261195_42261250_42264089_42264204_42267946_42268033_42272062_42272124_42273254
H1_mix_00028336	chr15	-	1598	7	FSM	ENSG00000103978.16	ENST00000307216.10	1598	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	94.9625657240204	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTTAGCAGTTTGGTGT	-7	True	NA	NA	False	AGTAAA	-26	NA	42273436	42257934	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_42258991_42260957_42261003_42261195_42261250_42264089_42264204_42267946_42268033_42272062_42272124_42273254
H1_mix_00028337	chr15	-	10465	19	FSM	ENSG00000103994.18	ENST00000263805.8	10460	19	0	-5	0	5	multi-exon	FALSE	canonical	3	95	junction_18	24.4499993688303	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTCGTTACCTTGTCTG	0	True	NA	-2	True	AATAAA	-23	NA	42457532	42412817	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_42417361_42417804_42417952_42421060_42421133_42421916_42421989_42422500_42422621_42423997_42424061_42424833_42425026_42428017_42428135_42435383_42435519_42437231_42437378_42438611_42438668_42439032_42439814_42442072_42442415_42444201_42444263_42444826_42444982_42446588_42446659_42448071_42448706_42449770_42451955_42456957
H1_mix_00028338	chr15	-	10380	22	FSM	ENSG00000103994.18	ENST00000564754.7	10396	22	21	-5	-15	5	multi-exon	FALSE	canonical	3	95	junction_18	26.3880856781927	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTCGTTACCTTGTCTG	8	True	NA	-2	True	AATAAA	-23	NA	42491120	42412817	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_42417361_42417804_42417952_42421060_42421133_42421916_42421989_42422500_42422621_42423997_42424061_42424833_42425026_42428017_42428135_42435383_42435519_42437231_42437378_42438611_42438668_42439032_42439814_42442072_42442415_42444201_42444263_42444826_42444982_42446588_42446659_42448071_42448706_42449770_42451955_42456957_42457159_42466052_42466115_42472235_42472322_42490979
H1_mix_00028339	chr15	-	4735	17	FSM	ENSG00000103994.18	ENST00000565500.5	4733	17	0	-2	0	0	multi-exon	FALSE	canonical	3	29	junction_12	37.0134582787126	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAATCTAGGAGATAATGA	9261	False	NA	NA	False	AAAAAG	-2	NA	42448298	42415120	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_42417361_42417804_42417952_42421060_42421133_42421916_42421989_42422500_42422621_42423997_42424061_42424833_42425026_42428017_42428135_42435383_42435519_42437231_42437378_42438611_42438668_42439032_42439553_42442072_42442415_42444201_42444263_42444826_42444982_42446588_42446659_42448071
H1_mix_00028342	chr15	-	900	4	FSM	ENSG00000103994.18	ENST00000567772.2	900	4	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	7.40870359029762	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGTCTATCCTCTGAATT	5055	False	NA	NA	False	AATAAA	-34	NA	42446598	42441740	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_42442415_42444201_42444263_42444826_42444982_42446588
H1_mix_00028343	chr15	-	7106	6	FSM	ENSG00000180979.10	ENST00000397130.8	7097	6	0	-9	0	0	multi-exon	FALSE	canonical	1	39	junction_5	25.3250863769504	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATTTGTCTTTCTGTGCCT	-8	True	NA	-2	True	AATAAA	-31	NA	42548793	42537819	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_42544125_42545076_42545263_42547260_42547530_42548105_42548245_42548350_42548457_42548692
H1_mix_00028344	chr15	-	429	2	FSM	ENSG00000180979.10	ENST00000562868.1	531	2	102	0	102	0	multi-exon	FALSE	canonical	3	98	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGAGATTATATTTCACT	3438	False	NA	NA	False	NA	NA	NA	42545347	42543966	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_42544125_42545076
H1_mix_00028346	chr15	-	4674	28	NIC	ENSG00000140326.13	novel	4657	28	NA	NA	4	18	combination_of_known_splicesites	FALSE	canonical	3	20	junction_26	13.3423837596426	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTTTAGAAGGCTGCAGT	-4	True	NA	NA	False	NA	NA	NA	42737124	42723525	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_42724617_42725143_42725252_42725488_42725671_42726096_42726161_42726309_42726418_42727620_42727770_42727954_42728034_42728203_42728268_42728651_42728811_42729022_42729127_42729228_42729363_42729567_42729623_42729795_42729886_42730127_42730216_42730597_42730765_42730924_42731072_42731210_42731332_42731619_42731826_42732332_42732409_42733096_42733187_42733937_42734048_42734225_42734347_42735099_42735179_42735260_42735375_42735509_42735680_42735874_42736082_42736301_42736781_42737012
H1_mix_00028347	chr15	-	4675	28	FSM	ENSG00000140326.13	ENST00000356231.4	4657	28	0	-18	0	18	multi-exon	FALSE	canonical	3	14	junction_26	13.9048303574777	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTTTAGAAGGCTGCAGT	-8	True	NA	NA	False	NA	NA	NA	42737128	42723525	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_42724617_42725143_42725252_42725488_42725671_42726096_42726161_42726309_42726418_42727620_42727770_42727954_42728034_42728203_42728268_42728651_42728811_42729022_42729127_42729228_42729363_42729567_42729623_42729795_42729886_42730127_42730216_42730597_42730765_42730924_42731072_42731210_42731332_42731619_42731826_42732332_42732409_42733096_42733187_42733937_42734048_42734225_42734347_42735099_42735179_42735260_42735375_42735509_42735680_42735874_42736079_42736301_42736781_42737012
H1_mix_00028348	chr15	-	2914	16	NIC	ENSG00000140326.13	novel	4657	28	NA	NA	-671	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_3	15.7217471463363	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGGCTTGATGTCTAATC	5685	False	NA	NA	False	AATAAA	-15	NA	42731435	42723561	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_42724617_42725143_42725252_42725488_42725671_42726309_42726418_42727620_42727770_42727954_42728034_42728203_42728268_42728651_42728811_42729022_42729127_42729228_42729363_42729567_42729623_42729795_42729886_42730127_42730216_42730597_42730765_42730924_42731072_42731210
H1_mix_00028350	chr15	-	11208	15	FSM	ENSG00000128881.18	ENST00000267890.11	11208	15	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	10.5745651717425	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTAGTCCATTATTCTG	2	True	NA	-14	True	AATAAA	-20	NA	42920778	42738729	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_42746258_42751973_42753248_42775134_42775724_42777030_42777243_42783418_42783636_42794643_42794802_42810613_42810740_42811687_42811781_42817031_42817098_42827927_42828033_42829937_42830079_42840359_42840434_42872610_42872759_42878548_42878685_42920437
H1_mix_00028351	chr15	-	7770	47	FSM	ENSG00000159459.12	ENST00000290650.9	7698	47	-71	-1	-2	1	multi-exon	TRUE	canonical	3	19	junction_26	9.50527164450953	338	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGACTTCTCATGTTTGGG	-11	True	NA	NA	False	AATAAA	-29	NA	43106109	42942895	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_42945471_42950261_42950364_42952277_42952449_42958012_42958091_42960644_42960702_42963934_42964044_42966152_42966287_42970519_42970608_42976716_42976868_42977879_42977948_42983896_42983994_42984886_42984943_42988818_42988968_42990029_42990121_42998167_42998266_43002554_43002705_43003836_43003931_43007078_43007285_43015687_43015870_43017094_43017182_43021274_43021376_43022701_43022802_43024828_43024984_43025380_43025430_43026560_43026664_43027775_43027829_43029943_43030069_43032567_43032632_43036177_43036280_43036527_43036594_43037772_43037884_43038170_43038233_43043214_43043396_43047160_43047290_43048391_43048492_43054741_43054900_43056343_43056443_43058340_43058430_43059084_43059193_43059701_43059826_43060051_43060115_43067897_43068037_43070794_43070926_43074978_43075090_43082637_43082717_43085983_43086241_43105941
H1_mix_00028353	chr15	-	712	1	FSM	ENSG00000205871.5	ENST00000487100.1	792	1	151	-71	151	71	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAAAAACTAATACTCAGG	177	False	NA	NA	False	AATAAA	-40	NA	43116342	43115630	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_43115600_43116300
H1_mix_00028356	chr15	-	6738	3	ISM	ENSG00000140265.14	ENST00000566849.5	2834	5	1558	-2846	1172	0	3prime_fragment	FALSE	canonical	3	19	junction_2	33.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTGTTTCTTGAAGTGT	2535	False	NA	-10	True	AATAAA	-19	NA	43368504	43358171	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_43361942_43363914_43364488_43366109
H1_mix_00028357	chr15	-	6092	6	NIC	ENSG00000140265.14	novel	6055	6	NA	NA	37	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	28.9509930745044	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTGTTTCTTGAAGTGT	33	False	NA	-10	True	AATAAA	-19	NA	43371006	43358171	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_43361942_43363914_43364488_43366109_43366775_43368922_43369128_43369595_43370026_43370557
H1_mix_00028359	chr15	-	6707	5	FSM	ENSG00000140265.14	ENST00000396976.6	5595	5	-1112	0	-117	0	multi-exon	FALSE	canonical	3	37	junction_4	36.1757861006502	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTGTTTCTTGAAGTGT	NA	False	NA	-10	True	AATAAA	-19	NA	43371160	43358171	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_43361942_43363914_43364383_43366109_43366809_43368922_43369128_43369595
H1_mix_00028362	chr15	-	3662	7	FSM	ENSG00000067369.14	ENST00000476454.5	2222	7	-974	-466	-974	461	multi-exon	FALSE	canonical	3	268	junction_5	50.9130522448703	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGTTACACGTTCTAGT	NA	False	NA	NA	False	GATAAA	-28	NA	43418190	43406747	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_43407571_43407942_43408089_43408896_43409097_43409646_43409742_43413118_43413335_43415593_43415810_43416224
H1_mix_00028366	chr15	-	5584	30	FSM	ENSG00000168781.23	ENST00000381885.5	5596	30	0	12	0	1	multi-exon	FALSE	canonical	3	17	junction_29	6.97097771629248	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGTGATGGATGATGGTG	5340	False	NA	-11	True	AATAAA	-18	NA	43584864	43533473	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_43535477_43539469_43539584_43558794_43558933_43564102_43564166_43564866_43564993_43568462_43568554_43571411_43571577_43571723_43571841_43572768_43572877_43573033_43573149_43573356_43573485_43573808_43574033_43574221_43574364_43576370_43576554_43576826_43576949_43577107_43577240_43577452_43577536_43577621_43577732_43577875_43577952_43578069_43578157_43579018_43579121_43581001_43581124_43581226_43581389_43581852_43581955_43582094_43582250_43582563_43582650_43582861_43582953_43583403_43583600_43584357_43584533_43584798
H1_mix_00028370	chr15	-	603	4	FSM	ENSG00000205771.7	ENST00000692045.1	925	4	36	286	12	-69	multi-exon	FALSE	canonical	1	1	junction_1	3.09120616516523	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATGTGCCTAGGTGAAT	-4	True	NA	NA	False	NA	NA	NA	43746285	43736797	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_43737009_43744394_43744569_43745021_43745168_43746213
H1_mix_00028371	chr15	-	1770	11	FSM	ENSG00000128886.12	ENST00000319359.8	1755	11	0	-15	0	0	multi-exon	FALSE	canonical	3	46	junction_2	8.21279489577087	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTTGTACAAGTTTATAT	18	True	NA	-16	True	ATTAAA	-17	NA	43776966	43772604	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_43773227_43773303_43773349_43774181_43774354_43774475_43774519_43774595_43774774_43775305_43775382_43775524_43775611_43775721_43775924_43776038_43776152_43776508_43776545_43776769
H1_mix_00028372	chr15	-	2048	9	FSM	ENSG00000140259.7	ENST00000267812.4	2043	9	0	-5	0	5	multi-exon	FALSE	canonical	3	320	junction_3	18.0329559418305	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTCACATTTTGATAATT	18	True	NA	2	True	ATTAAA	-30	NA	43824690	43804486	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_43805277_43805375_43805466_43809754_43809915_43812986_43813148_43813248_43813358_43814500_43814689_43814944_43815075_43817228_43817449_43824490
H1_mix_00028373	chr15	-	5424	14	FSM	ENSG00000171877.21	ENST00000417257.6	5051	14	-22	-351	-22	348	multi-exon	FALSE	canonical	3	27	junction_6	7.37579601561115	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGCGCCTATAATTCCAGC	30	False	NA	NA	False	AATACA	-22	NA	44195293	43870412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_43874463_43883702_43883810_43884726_43884796_43885680_43885756_43888174_43888267_43888808_43888873_43891980_43892070_43902174_43902263_43905827_43905952_43909881_43909980_43919458_43919538_43919766_43919810_43924204_43924310_44194952
H1_mix_00028374	chr15	-	417	1	FSM	ENSG00000227973.1	ENST00000451079.1	396	1	0	-21	0	21	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3656	False	NA	NA	False	AATAAA	-21	NA	43876244	43875827	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_43875800_43876200
H1_mix_00028375	chr15	-	2837	2	FSM	ENSG00000179523.6	ENST00000313807.5	2873	2	10	26	-1	-26	multi-exon	FALSE	canonical	3	68	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCCAGCCTGGATGACAC	NA	False	NA	NA	False	NA	NA	NA	44536923	44533518	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_44535475_44536042
H1_mix_00028376	chr15	-	3136	2	FSM	ENSG00000179523.6	ENST00000657789.1	2114	2	-30	-992	-10	-30	multi-exon	FALSE	canonical	3	19	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCACTCCAGCCTGGATG	NA	False	NA	NA	False	NA	NA	NA	44536943	44533522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_44535475_44535759
H1_mix_00028377	chr15	-	2272	3	FSM	ENSG00000179523.6	ENST00000560049.2	1408	3	28	-892	0	-120	multi-exon	FALSE	canonical	3	27	junction_2	20.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCCTATAATTCCAGCTA	-12	True	NA	NA	False	AATACA	-24	NA	44536894	44533612	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_44535475_44536042_44536359_44536800
H1_mix_00028378	chr15	-	7772	40	FSM	ENSG00000104133.16	ENST00000261866.12	7772	40	0	0	0	0	multi-exon	TRUE	canonical	2	32	junction_26	15.2228676732486	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATGTCATTATTACTGC	6	True	NA	-1	True	AATAAA	-17	NA	44663662	44562695	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_44563302_44564546_44564699_44565853_44566010_44566216_44566306_44567423_44567593_44569397_44569506_44570524_44570659_44572682_44572821_44573546_44573746_44574901_44575042_44583813_44584559_44585635_44585851_44589251_44589415_44592330_44592439_44595258_44595460_44596082_44596356_44596783_44596944_44598264_44598374_44598630_44598837_44600466_44600633_44606024_44606092_44608443_44608606_44610839_44610986_44613429_44613537_44615362_44615567_44620189_44620404_44621758_44621935_44622219_44622348_44622727_44622800_44626330_44626508_44628668_44628845_44629232_44629389_44633504_44633638_44648865_44649012_44651490_44651940_44652128_44652267_44657094_44657297_44659078_44659304_44660431_44660617_44663390
H1_mix_00028383	chr15	-	1133	2	FSM	ENSG00000259479.6	ENST00000562107.1	1133	2	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTTCTACAGCTTCTGA	NA	False	NA	NA	False	AAAAAG	-32	NA	44828731	44826370	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_44827222_44828449
H1_mix_00028385	chr15	-	2062	6	FSM	ENSG00000138606.20	ENST00000560540.5	2062	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	38.4582890935101	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCGAAGCATCAAGTTCC	8	True	NA	-4	True	TATAAA	-39	NA	45187956	45167213	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_45168134_45171882_45172003_45172148_45172319_45175218_45175426_45178164_45178307_45187453
H1_mix_00028386	chr15	-	1771	4	FSM	ENSG00000138606.20	ENST00000560734.5	1731	4	-3	-37	0	0	multi-exon	FALSE	canonical	3	28	junction_1	53.4935094712953	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCGAAGCATCAAGTTCC	9	True	NA	-4	True	TATAAA	-39	NA	45187955	45167213	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_45168134_45175218_45175426_45178164_45178307_45187453
H1_mix_00028388	chr15	-	1167	4	FSM	ENSG00000259520.6	ENST00000560344.6	2470	4	0	1303	0	-1303	multi-exon	FALSE	canonical	0	0	junction_3	0.816496580927726	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTCCTACTTGGACCCTC	-4	True	NA	NA	False	AATGAA	-39	NA	45279229	45252885	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_45253935_45255329_45255368_45255951_45255999_45279196
H1_mix_00028391	chr15	-	9572	3	FSM	ENSG00000104177.19	ENST00000558289.5	4516	3	-255	-4801	-255	1	multi-exon	FALSE	canonical	3	140	junction_2	20.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAGTGCCCTGTTGTCCA	1993	False	NA	-4	True	AATAAA	-16	NA	48150241	48134630	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_48143072_48149031_48149084_48149162
H1_mix_00028392	chr15	-	10140	17	FSM	ENSG00000104177.19	ENST00000324324.12	10137	17	0	-3	0	3	multi-exon	FALSE	canonical	0	0	junction_13	50.7689311981255	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTGCCCTGTTGTCCATC	19	True	NA	-2	True	AATAAA	-18	NA	48178295	48134628	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_48143072_48149031_48149084_48149162_48149372_48151099_48151172_48151472_48151572_48151873_48151943_48152233_48152285_48153791_48153894_48157992_48158057_48158174_48158225_48158768_48158923_48159612_48159805_48165932_48166027_48166120_48166129_48167348_48167402_48168630_48168840_48178076
H1_mix_00028393	chr15	-	4488	10	ISM	ENSG00000104177.19	ENST00000267836.10	2958	16	19433	-2365	0	0	3prime_fragment	FALSE	canonical	3	101	junction_3	20.0819309484244	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGATTTCATTTATAAGAT	NA	False	NA	-9	True	AATAAA	-16	NA	48158920	48139431	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_48143072_48149031_48149084_48149162_48149372_48151472_48151572_48151873_48151943_48152233_48152285_48153791_48153894_48157992_48158057_48158174_48158225_48158768
H1_mix_00028394	chr15	-	2959	16	FSM	ENSG00000104177.19	ENST00000267836.10	2958	16	0	-1	0	0	multi-exon	FALSE	canonical	0	0	junction_12	51.3964979351706	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTTATTTGTTGCTTTT	-1	True	NA	NA	False	ATTAAA	-20	NA	48178353	48141795	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_48143072_48149031_48149084_48149162_48149372_48151472_48151572_48151873_48151943_48152233_48152285_48153791_48153894_48157992_48158057_48158174_48158225_48158768_48158923_48159612_48159805_48165932_48166027_48166120_48166129_48167348_48167402_48168630_48168840_48178076
H1_mix_00028397	chr15	-	10773	66	FSM	ENSG00000166147.15	ENST00000316623.10	11609	66	75	761	75	-570	multi-exon	TRUE	canonical	2	5	junction_58	4.66308682078994	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGAGCTGAATGGCTGT	323	False	NA	NA	False	NA	NA	NA	48645634	48409073	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_48411380_48412568_48412744_48415535_48415768_48420686_48420807_48421557_48421687_48421951_48422069_48425368_48425492_48425738_48425865_48427566_48427774_48428345_48428472_48430670_48430803_48432865_48432989_48434593_48434714_48436960_48437078_48437321_48437388_48437767_48437918_48441720_48441847_48444540_48444661_48445375_48445505_48446705_48446823_48448767_48448894_48452561_48452685_48456636_48456763_48460245_48460318_48463081_48463241_48463898_48464022_48465567_48465694_48465789_48465859_48467937_48468103_48468411_48468535_48470633_48470757_48472550_48472677_48474254_48474378_48474527_48474651_48481654_48481781_48483817_48483944_48485373_48485497_48487074_48487201_48487311_48487438_48488112_48488242_48488367_48488494_48489850_48490079_48492460_48492587_48494203_48494255_48495122_48495261_48495468_48495589_48496099_48496226_48497265_48497392_48498984_48499039_48503786_48503940_48505024_48505148_48508581_48508705_48510043_48510170_48513548_48513669_48515386_48515528_48516182_48516363_48520658_48520818_48526129_48526256_48534079_48534206_48537610_48537809_48596282_48596379_48600138_48600235_48610727_48610827_48613009_48613093_48644605_48644951_48645574
H1_mix_00028399	chr15	-	268	2	FSM	ENSG00000259469.1	ENST00000559165.1	540	2	263	9	263	-9	multi-exon	FALSE	canonical	2	5	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCAACAACTGATTGTTAA	NA	False	NA	NA	False	ATTAAA	-16	NA	48729581	48729088	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_48729187_48729411
H1_mix_00028400	chr15	-	7887	26	NIC	ENSG00000103995.14	novel	5560	27	NA	NA	0	54	intron_retention	FALSE	canonical	3	50	junction_4	9.75097943798468	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTTGAAATTCACCCAGA	-13	True	NA	53	True	AATACA	-20	NA	48811030	48737883	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_48741705_48741946_48742101_48744239_48744344_48744895_48744993_48748442_48748611_48752348_48752470_48755902_48756554_48760134_48760267_48762390_48762673_48767059_48767193_48767334_48767464_48768218_48768329_48768955_48769082_48772486_48772692_48781195_48781360_48782138_48782231_48783972_48784121_48788800_48789002_48791236_48791377_48793320_48793462_48796009_48796161_48797300_48797580_48797660_48797731_48797947_48798052_48805562_48805657_48810960
H1_mix_00028401	chr15	-	5562	27	FSM	ENSG00000103995.14	ENST00000380950.7	5560	27	0	-2	0	2	multi-exon	FALSE	canonical	3	26	junction_1	13.1944941000484	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTATGAATTATTTTGT	2	True	NA	1	True	AATAAA	-20	NA	48811069	48737935	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_48739289_48741600_48741705_48741946_48742101_48744239_48744344_48744895_48744993_48748442_48748611_48752348_48752470_48755902_48756554_48760134_48760267_48762390_48762673_48767059_48767193_48767334_48767464_48768218_48768329_48768955_48769082_48772486_48772692_48781195_48781360_48782138_48782231_48783972_48784121_48788800_48789002_48791236_48791377_48793320_48793462_48796009_48796161_48797300_48797580_48797660_48797731_48797947_48798052_48805562_48805657_48810960
H1_mix_00028402	chr15	-	7841	24	NIC	ENSG00000103995.14	novel	5560	27	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_20	17.7784091990367	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGTTATGAATTATTTT	-4	True	NA	-1	True	AATAAA	-18	NA	48811075	48737937	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_48742101_48744239_48744344_48744895_48744993_48748442_48748611_48752348_48752470_48755902_48756554_48760134_48760267_48762390_48762673_48767059_48767193_48767334_48767464_48768218_48768329_48768955_48769082_48772486_48772692_48781195_48781360_48782138_48782231_48783972_48784121_48788800_48789002_48791236_48791377_48793320_48793462_48796009_48796161_48797660_48797731_48797947_48798052_48805562_48805657_48810960
H1_mix_00028403	chr15	-	5097	26	FSM	ENSG00000103995.14	ENST00000399334.7	5097	26	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	17.1700203843793	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTAATAACATCTGTTA	84	False	NA	NA	False	NA	NA	NA	48810987	48738150	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_48739289_48741600_48741705_48741946_48742101_48744239_48744344_48744895_48744993_48752348_48752470_48755902_48756554_48760134_48760267_48762390_48762673_48767059_48767193_48767334_48767464_48768218_48768329_48768955_48769082_48772486_48772692_48781195_48781360_48782138_48782231_48783972_48784121_48788800_48789002_48791236_48791377_48793320_48793462_48796009_48796161_48797300_48797580_48797660_48797731_48797947_48798052_48805562_48805657_48810960
H1_mix_00028405	chr15	-	1947	13	FSM	ENSG00000103995.14	ENST00000560322.5	1947	13	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_6	9.49853789918334	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGATGAAAAAAGCATTG	NA	False	NA	NA	False	AAGAAA	-24	NA	48811146	48772514	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_48772692_48781195_48781360_48782138_48782231_48783972_48784121_48788800_48789002_48791236_48791377_48793320_48793462_48796009_48796161_48797300_48797580_48797660_48797731_48797947_48798052_48805562_48805657_48810960
H1_mix_00028407	chr15	-	3988	2	ISM	ENSG00000138593.9	ENST00000559424.1	1084	9	9151	14129	9137	6319	internal_fragment	FALSE	canonical	1	6	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTGTCTCAAAAGGGAAAAA	9469	False	NA	NA	False	NA	NA	NA	49037296	49031075	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_49033101_49035333
H1_mix_00028408	chr15	-	546	2	FSM	ENSG00000138593.9	ENST00000557923.1	546	2	4	-4	4	4	multi-exon	FALSE	canonical	3	10	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCTCCTTCAGTAAGTC	23	True	NA	NA	False	NA	NA	NA	49046442	49037390	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_49037770_49046275
H1_mix_00028409	chr15	-	6576	13	FSM	ENSG00000166200.15	ENST00000388901.10	6576	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	117.875257746861	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTAAGTATTTACTGTG	0	True	NA	NA	False	AATAAA	-15	NA	49155599	49122726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_49128095_49128701_49128761_49129476_49129560_49130718_49130817_49133758_49133812_49133929_49134109_49134339_49134515_49137149_49137228_49137347_49137438_49139527_49139654_49144226_49144305_49144964_49145079_49155524
H1_mix_00028410	chr15	-	2022	13	FSM	ENSG00000166200.15	ENST00000299259.10	2036	13	14	0	14	0	multi-exon	FALSE	canonical	0	0	junction_6	120.91258895031	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTAGTTTGGTTCTTGATG	-4	True	NA	-6	True	AATAAA	-17	NA	49155647	49127349	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_49128095_49128701_49128761_49129476_49129560_49130718_49130817_49133758_49133812_49133929_49134109_49134339_49134515_49137149_49137228_49137347_49137459_49139527_49139654_49144226_49144305_49144964_49145079_49155524
H1_mix_00028411	chr15	-	627	4	ISM	ENSG00000166262.16	ENST00000559573.3	2204	5	34	1689	34	-258	intron_retention	FALSE	canonical	3	18	junction_2	3.77123616632825	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGTGGCATCACTATCG	NA	False	NA	NA	False	NA	NA	NA	49396408	49328650	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_49328676_49331779_49331850_49371301_49371400_49395974
H1_mix_00028412	chr15	-	982	4	FSM	ENSG00000166262.16	ENST00000558579.5	982	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	4.32049379893857	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAAGCTGTTATCAGTGT	NA	False	NA	-12	True	ATTAAA	-16	NA	49589943	49576135	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_49576846_49577628_49577665_49588015_49588084_49589775
H1_mix_00028413	chr15	-	4609	9	FSM	ENSG00000104064.18	ENST00000380877.8	4609	9	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_4	43.1637507058875	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTTGTCCAAAACGTGA	-8	True	NA	NA	False	AATAAA	-17	NA	50355198	50275388	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_50278785_50286067_50286184_50289482_50289669_50300788_50300903_50301256_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50354984
H1_mix_00028414	chr15	-	2726	9	FSM	ENSG00000104064.18	ENST00000220429.12	2726	9	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_4	56.6545176927666	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATATGTTCATTGTAGAC	6	True	NA	-16	True	ATTAAA	-10	NA	50355153	50277262	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_50278785_50286067_50286184_50289482_50289669_50300788_50300903_50301220_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50354984
H1_mix_00028415	chr15	-	2604	9	FSM	ENSG00000104064.18	ENST00000359031.8	1633	9	210	-1181	0	1179	multi-exon	FALSE	canonical	3	29	junction_7	93.5441072435886	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAATTTTTATTAAATGT	-8	True	NA	NA	False	AATAAA	-18	NA	50355198	50284700	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_50286184_50289482_50289669_50300788_50300903_50301256_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50346371_50346396_50354984
H1_mix_00028417	chr15	-	1392	8	FSM	ENSG00000104064.18	ENST00000429662.6	1392	8	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_3	56.8976883429855	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGAGTGAAGAATTTGT	6	True	NA	-10	True	AATAAA	-20	NA	50355153	50285879	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_50286184_50289482_50289669_50300788_50300903_50301220_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50354984
H1_mix_00028418	chr15	-	2586	8	FSM	ENSG00000104064.18	ENST00000396464.7	1401	8	0	-1185	0	1185	multi-exon	FALSE	canonical	3	140	junction_3	39.7199379328286	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTATTAAATGTAAGCTT	-8	True	NA	NA	False	AATAAA	-24	NA	50355198	50284694	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_50286184_50289482_50289669_50300788_50300903_50301256_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50354984
H1_mix_00028419	chr15	-	5926	1	FSM	ENSG00000285410.1	ENST00000615671.2	5926	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCACCTCCATCTCCTTT	13	True	NA	NA	False	ATTAAA	-27	NA	50354861	50348935	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_50348900_50354900
H1_mix_00028421	chr15	-	10386	39	FSM	ENSG00000092439.16	ENST00000646667.1	10382	39	0	-4	0	4	multi-exon	TRUE	canonical	3	60	junction_15	21.4800203500422	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCAAGTAATTATTTACAG	-6	True	NA	NA	False	AATAAA	-25	NA	50686797	50557153	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_50561809_50569886_50569994_50570103_50570156_50574273_50574480_50574636_50574720_50574851_50575136_50575723_50575790_50575868_50575920_50578638_50578665_50580873_50580909_50583088_50583160_50586391_50586489_50589591_50589657_50591910_50592627_50593616_50593750_50594428_50594614_50596254_50596382_50599121_50599297_50604865_50605145_50607199_50607329_50609580_50609725_50609805_50609962_50611092_50611322_50612548_50612830_50613706_50613842_50614122_50614264_50619744_50619799_50624165_50624301_50628148_50628250_50631416_50631490_50632868_50632993_50634381_50634557_50637421_50637594_50639423_50639549_50643339_50643554_50648686_50648886_50657780_50657820_50662966_50663047_50686530
H1_mix_00028422	chr15	-	7218	39	FSM	ENSG00000092439.16	ENST00000560955.5	7218	39	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_11	23.8376462659673	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTAGTGAGTTTAATCAT	20	True	NA	-5	True	AATAAA	-16	NA	50686771	50560292	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_50561809_50569886_50569994_50570103_50570156_50574273_50574480_50574636_50574720_50574851_50575136_50575723_50575790_50575868_50575920_50578638_50578665_50580873_50580909_50583088_50583157_50586391_50586489_50589591_50589657_50591910_50592627_50593616_50593750_50594428_50594614_50596254_50596382_50599121_50599297_50604865_50605145_50607199_50607329_50609580_50609725_50609805_50609962_50611092_50611322_50612548_50612830_50613706_50613842_50614122_50614264_50619744_50619799_50624165_50624301_50628148_50628250_50631416_50631490_50632868_50632993_50634381_50634557_50637421_50637594_50639423_50639549_50643339_50643554_50648686_50648886_50657780_50657820_50662966_50663047_50686530
H1_mix_00028426	chr15	-	7275	15	FSM	ENSG00000138600.10	ENST00000261854.10	7270	15	0	-5	0	5	multi-exon	FALSE	canonical	3	89	junction_4	20.2208469916872	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTTTTATTTTGAATGA	-19	True	NA	NA	False	AATAAA	-24	NA	50765706	50702260	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_50707875_50719939_50720101_50722123_50722202_50725220_50725324_50726320_50726378_50730964_50731040_50732602_50732685_50736100_50736203_50736643_50736741_50739679_50739829_50747494_50747629_50748112_50748203_50748687_50748871_50749635_50749747_50765467
H1_mix_00028427	chr15	-	1422	12	FSM	ENSG00000138600.10	ENST00000558934.1	1422	12	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	44.1501944437563	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGTTTTACTGTAAAGAA	8094	False	NA	NA	False	NA	NA	NA	50747531	50707447	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_50707875_50719939_50720101_50722123_50722202_50725220_50725324_50726072_50726127_50726320_50726378_50730964_50731040_50732602_50732685_50736100_50736203_50736643_50736741_50739679_50739829_50747494
H1_mix_00028428	chr15	-	1963	16	NIC	ENSG00000138600.10	novel	7270	15	NA	NA	29	-150	combination_of_known_junctions	FALSE	canonical	3	26	junction_4	38.7053829159029	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAACATATGGTCTGTGT	10	True	NA	-39	True	ACTAAA	-41	NA	50765677	50707597	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_50707875_50719939_50720101_50722123_50722202_50725220_50725324_50726072_50726127_50726320_50726378_50730964_50731040_50732602_50732685_50736100_50736203_50736643_50736741_50739679_50739829_50747494_50747629_50748112_50748203_50748687_50748871_50749635_50749747_50765467
H1_mix_00028429	chr15	-	10661	43	FSM	ENSG00000104093.14	ENST00000251076.9	10672	43	0	11	0	-11	multi-exon	TRUE	canonical	2	4	junction_10	8.83663781086752	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCAAGCTATTTGGCAGT	-15	True	NA	51	True	GATAAA	-20	NA	51622833	51447721	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_51449194_51450128_51450347_51451644_51451698_51453549_51453642_51455150_51455229_51456065_51456194_51456308_51456370_51457327_51457467_51458505_51458628_51458708_51458796_51463378_51463497_51464674_51464877_51465565_51465652_51466183_51466312_51471222_51471402_51474343_51474593_51476588_51476717_51478270_51478348_51479947_51480140_51480541_51481624_51486072_51486338_51487953_51488120_51488547_51488646_51491577_51491748_51495023_51495135_51498551_51500232_51502805_51503034_51507133_51507254_51514441_51514560_51517077_51517168_51535662_51535785_51536165_51536863_51537487_51537760_51538212_51538453_51542332_51542508_51545582_51545767_51547229_51547409_51563380_51563448_51564124_51564261_51565087_51565167_51568486_51568559_51576055_51576182_51622458
H1_mix_00028431	chr15	-	10400	43	FSM	ENSG00000104093.14	ENST00000543779.6	10400	43	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_10	8.6906066526411	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTTTGATACTGTTTTT	-1	True	NA	-15	True	AATAAA	-18	NA	51622635	51447787	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_51449194_51450128_51450347_51451644_51451698_51453549_51453642_51455150_51455229_51456065_51456194_51456308_51456370_51457327_51457467_51458505_51458628_51458708_51458796_51463378_51463497_51464674_51464877_51465565_51465652_51466183_51466312_51471222_51471402_51474343_51474593_51476588_51476720_51478270_51478348_51479947_51480140_51480541_51481624_51486072_51486338_51487953_51488120_51488547_51488646_51491577_51491748_51495023_51495135_51498551_51500232_51502805_51503034_51507133_51507254_51514441_51514560_51517077_51517168_51535662_51535785_51536165_51536863_51537487_51537760_51538212_51538453_51542332_51542508_51545582_51545767_51547229_51547409_51563380_51563448_51564124_51564261_51565087_51565167_51568486_51568559_51576055_51576182_51622458
H1_mix_00028432	chr15	-	10599	44	FSM	ENSG00000104093.14	ENST00000560891.6	10596	44	0	-3	0	0	multi-exon	FALSE	canonical	3	9	junction_35	8.19344274748086	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTTTGATACTGTTTTT	-11	True	NA	-15	True	AATAAA	-18	NA	51622771	51447787	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_51449194_51450128_51450347_51451644_51451698_51453549_51453642_51455150_51455229_51456065_51456194_51456308_51456370_51457327_51457467_51458505_51458628_51458708_51458796_51459597_51459661_51463378_51463497_51464674_51464877_51465565_51465652_51466183_51466312_51471222_51471402_51474343_51474593_51476588_51476720_51478270_51478348_51479947_51480140_51480541_51481624_51486072_51486338_51487953_51488120_51488547_51488646_51491577_51491748_51495023_51495135_51498551_51500232_51502805_51503034_51507133_51507254_51514441_51514560_51517077_51517168_51535662_51535785_51536165_51536863_51537487_51537760_51538212_51538453_51542332_51542508_51545582_51545767_51547229_51547409_51563380_51563448_51564124_51564261_51565087_51565167_51568486_51568559_51576055_51576182_51622458
H1_mix_00028433	chr15	-	1277	3	FSM	ENSG00000140280.14	ENST00000267838.7	1277	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	1.5	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTAAATGCTGACAGCTT	-14	True	NA	54	True	AATAAA	-19	NA	51737655	51723010	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_51723650_51724789_51725122_51737349
H1_mix_00028436	chr15	-	2182	12	FSM	ENSG00000166477.13	ENST00000299601.10	2165	12	0	-17	0	17	multi-exon	FALSE	canonical	3	386	junction_10	46.3167320675961	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTACTTTTCCGGCCAGGC	-12	True	NA	16	True	AATAAA	-33	NA	51971778	51938007	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_51938261_51947291_51947390_51949807_51949995_51951843_51951980_51953128_51953264_51954480_51954576_51958741_51958827_51959898_51960045_51960638_51960734_51962388_51962494_51965748_51966505_51971687
H1_mix_00028437	chr15	-	2489	1	FSM	ENSG00000274528.1	ENST00000612566.1	866	1	-1633	10	-1633	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACACAAAGCCTGTTTGG	187	False	NA	-8	True	AATAAA	-12	NA	52019665	52017176	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_52017200_52019700
H1_mix_00028438	chr15	-	2695	10	NIC	ENSG00000069966.19	novel	1735	11	NA	NA	57	8	combination_of_known_splicesites	FALSE	canonical	2	2	junction_5	72.001200264344	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCAGAGCAGTTACTGGT	543	False	NA	-11	True	AATAAA	-22	NA	52179830	52120930	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_52122769_52124472_52124640_52125947_52126045_52128195_52128245_52133377_52133470_52141139_52141273_52147458_52147536_52149883_52149926_52153939_52154077_52179767
H1_mix_00028440	chr15	-	2996	11	FSM	ENSG00000069966.19	ENST00000358784.11	1735	11	6	-1267	6	0	multi-exon	FALSE	canonical	3	191	junction_1	17.6022725805505	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATCATTTGCAGAGCAG	378	False	NA	-19	True	AATAAA	-14	NA	52179995	52120938	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_52122769_52124472_52124640_52125947_52126045_52128195_52128245_52133377_52133470_52135612_52135757_52141139_52141273_52147458_52147536_52149883_52149926_52153939_52154077_52179767
H1_mix_00028441	chr15	-	6975	41	FSM	ENSG00000128833.13	ENST00000261839.12	6977	41	6	-4	6	4	multi-exon	TRUE	canonical	3	39	junction_22	15.7559314228007	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGTCAGATTCTTTCATT	-17	True	NA	NA	False	AATAAA	-18	NA	52295798	52192317	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_52194055_52195376_52195458_52196308_52196484_52204864_52205148_52205815_52205967_52208553_52208644_52211729_52211885_52213187_52213287_52214602_52214691_52218518_52218688_52219758_52219823_52221161_52221256_52223543_52223725_52224900_52224982_52225074_52225139_52225438_52225533_52229132_52229314_52232621_52232686_52235669_52235764_52237481_52237647_52239732_52239880_52242047_52242214_52244355_52244568_52245353_52245466_52245955_52246043_52246916_52247015_52247457_52247593_52248699_52248784_52251389_52251516_52253316_52253458_52256638_52256721_52260861_52261128_52264189_52264297_52269752_52269861_52271762_52271845_52272579_52272724_52275561_52275719_52278872_52279018_52279508_52279675_52282781_52282893_52295609
H1_mix_00028442	chr15	-	726	5	FSM	ENSG00000128833.13	ENST00000559696.1	837	5	111	0	111	0	multi-exon	FALSE	canonical	3	66	junction_2	11.056672193748	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCATGACCTCCGTCCTGC	NA	False	NA	NA	False	NA	NA	NA	52213417	52205047	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_52205148_52205815_52205967_52208553_52208644_52211729_52211885_52213187
H1_mix_00028447	chr15	-	12298	40	FSM	ENSG00000197535.16	ENST00000692556.1	5579	40	-323	-6396	3	1	multi-exon	FALSE	canonical	3	21	junction_11	12.459533446382	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTCAGTGTCTTATAA	4	True	NA	NA	False	AATAAA	-18	NA	52529129	52307279	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_52313849_52314122_52314204_52317047_52317223_52319059_52319343_52321358_52321510_52323354_52323445_52327851_52328007_52330352_52330500_52336462_52336557_52340195_52340395_52343116_52343198_52346360_52346462_52351253_52351482_52353604_52353659_52353870_52354015_52359967_52360082_52364553_52364703_52367030_52367125_52370168_52370418_52372123_52372364_52375303_52375461_52376346_52376559_52379624_52379734_52379821_52379909_52383090_52383189_52384160_52384323_52387828_52387913_52389237_52389364_52391929_52392071_52396315_52396398_52397200_52397467_52405286_52405394_52407291_52407400_52408058_52408141_52410332_52410477_52416144_52416302_52425829_52425975_52428397_52428570_52433174_52433286_52528779
H1_mix_00028448	chr15	-	12217	39	NIC	ENSG00000197535.16	novel	12223	40	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	3	38	junction_10	10.9845017992804	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTCAGTGTCTTATAA	4	True	NA	NA	False	AATAAA	-18	NA	52529129	52307279	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_52313849_52314122_52314204_52317047_52317223_52319059_52319343_52321358_52321510_52323354_52323445_52327851_52328007_52330352_52330500_52336462_52336557_52340195_52340395_52346360_52346462_52351253_52351482_52353604_52353659_52353870_52354015_52359967_52360082_52364553_52364703_52367030_52367125_52370168_52370418_52372123_52372364_52375303_52375461_52376346_52376559_52379624_52379734_52379821_52379909_52383090_52383189_52384160_52384323_52387828_52387913_52389237_52389364_52391929_52392071_52396315_52396398_52397200_52397467_52405286_52405394_52407291_52407400_52408058_52408141_52410332_52410477_52416144_52416302_52425829_52425975_52428397_52428570_52433174_52433286_52528779
H1_mix_00028451	chr15	-	5368	3	FSM	ENSG00000128989.11	ENST00000249822.9	5366	3	0	-2	0	2	multi-exon	FALSE	canonical	3	1564	junction_1	92.5	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTCATCTTATTTGTGA	-31	True	NA	2	True	ATTAAA	-19	NA	52569030	52547042	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_52552105_52557099_52557223_52568847
H1_mix_00028452	chr15	-	5334	4	FSM	ENSG00000128989.11	ENST00000566423.5	5362	4	30	-2	0	2	multi-exon	FALSE	canonical	3	161	junction_3	709.019510779969	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTCATCTTATTTGTGA	0	True	NA	2	True	ATTAAA	-19	NA	52569209	52547042	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_52552105_52557099_52557223_52568847_52568903_52569115
H1_mix_00028453	chr15	-	955	3	FSM	ENSG00000128989.11	ENST00000563277.5	955	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	766	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTGGTGTAACTTATGT	0	True	NA	NA	False	NA	NA	NA	52569209	52551366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_52552105_52557099_52557223_52569115
H1_mix_00028454	chr15	-	745	4	FSM	ENSG00000128989.11	ENST00000567669.5	745	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	745.590146572946	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGTTACTCTTATTTAA	42	False	52569182	NA	False	TTTAAA	-45	NA	52569167	52551593	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_52552105_52557099_52557223_52568847_52568903_52569111
H1_mix_00028457	chr15	-	4744	13	FSM	ENSG00000047346.13	ENST00000619572.5	4726	13	-18	0	-18	0	multi-exon	FALSE	canonical	2	8	junction_12	10.3225750448013	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACGTGTACTTGGCTTTT	-24	True	NA	NA	False	AATATA	-16	NA	52679406	52581320	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_52582308_52584744_52584945_52587150_52587220_52593577_52593737_52600126_52600236_52601085_52601166_52605132_52605247_52608567_52610384_52611129_52611256_52611574_52611778_52613672_52613858_52678005_52678123_52678827
H1_mix_00028458	chr15	-	1233	3	FSM	ENSG00000259203.3	ENST00000654059.2	1337	3	102	2	5	-2	multi-exon	FALSE	canonical	3	16	junction_1	8.5	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTTTTCCAGAATCCA	6	True	NA	-14	True	AATAAA	-16	NA	52804887	52800167	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_52800918_52804208_52804298_52804493
H1_mix_00028459	chr15	-	4524	2	NIC	ENSG00000259203.3	novel	1337	3	NA	NA	7	0	intron_retention	FALSE	canonical	3	33	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTCCAGAATCCAGT	79	False	NA	-12	True	AATAAA	-18	NA	52804885	52800165	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_52804298_52804493
H1_mix_00028460	chr15	-	4319	3	FSM	ENSG00000166415.15	ENST00000567224.1	4333	3	0	14	0	-13	multi-exon	FALSE	canonical	3	8	junction_2	7	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTATCTTGATTACTG	NA	False	NA	NA	False	ATTAAA	-2	NA	53541103	53513754	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_53517755_53523217_53523323_53540889
H1_mix_00028461	chr15	-	1889	6	FSM	ENSG00000137876.11	ENST00000260443.9	1889	6	0	0	0	0	multi-exon	FALSE	canonical	3	2115	junction_3	42.6942619095353	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTTTTATTAGGAAACAAGT	-16	True	NA	-6	True	AATAAA	-15	NA	55196941	55180805	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_55182226_55183314_55183401_55185361_55185426_55190974_55191048_55192719_55192834_55196809
H1_mix_00028462	chr15	-	2456	3	FSM	ENSG00000137876.11	ENST00000677267.1	2455	3	0	-1	0	0	multi-exon	FALSE	canonical	3	2190	junction_1	11.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAACCATTTAAAAAG	9793	False	NA	-24	True	NA	NA	NA	55186842	55181336	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_55182226_55183314_55183401_55185361
H1_mix_00028463	chr15	-	3447	7	FSM	ENSG00000069974.16	ENST00000336787.6	3447	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	8.67307455417179	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTGTGAACGTAACTG	-25	True	NA	0	True	AATAAA	-22	NA	55289813	55202965	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_55205706_55223888_55224013_55228608_55228713_55230400_55230487_55234781_55234957_55270164_55270285_55289715
H1_mix_00028464	chr15	-	801	2	FSM	ENSG00000225973.4	ENST00000567948.1	801	2	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGCAAAAAAACCCACAAATA	-20	True	NA	NA	False	AAAACA	-4	NA	55319161	55317321	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_55317868_55318906
H1_mix_00028465	chr15	-	944	2	FSM	ENSG00000225973.4	ENST00000436697.3	944	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGTTAATTTTAATGTTT	18	True	NA	-7	True	AATAAA	-27	NA	55319123	55317183	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_55317868_55318863
H1_mix_00028466	chr15	-	3553	9	FSM	ENSG00000260916.8	ENST00000442196.8	3553	9	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	32.6831378542514	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGTTTCAGTCAATTTT	-10	True	NA	-14	True	AATAAA	-33	NA	55408359	55355238	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_55356410_55359538_55360945_55365187_55365310_55371792_55372045_55376948_55377151_55378299_55378377_55385599_55385715_55389364_55389434_55408220
H1_mix_00028469	chr15	-	1770	9	FSM	ENSG00000256061.7	ENST00000348518.4	1897	9	127	0	-97	0	multi-exon	TRUE	canonical	3	10	junction_1	12.3161479367536	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTTTGTATTAATATA	117	False	NA	NA	False	AATAAA	-15	NA	55498474	55430307	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_55430780_55432496_55432603_55434904_55435059_55439471_55439582_55450221_55450368_55466929_55467162_55491122_55491257_55497711_55497860_55498206
H1_mix_00028470	chr15	-	881	4	ISM	ENSG00000256061.7	ENST00000457155.6	1567	8	7	36419	-1	234	5prime_fragment	FALSE	canonical	3	27	junction_2	6.79869268479038	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGGATTCGAAAAGAAGAG	-8	True	NA	-15	True	AATAAA	-18	NA	55498370	55466726	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_55467162_55491122_55491257_55497711_55497860_55498206
H1_mix_00028471	chr15	-	8608	3	FSM	ENSG00000171016.13	ENST00000563719.4	8861	3	108	145	108	-139	multi-exon	FALSE	canonical	1	2	junction_2	2	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTGTTTATCAGTATATA	728	False	NA	NA	False	NA	NA	NA	55588237	55539028	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_55547148_55548909_55548996_55587834
H1_mix_00028472	chr15	-	12146	20	FSM	ENSG00000166450.13	ENST00000389286.9	12142	20	0	-4	0	4	multi-exon	FALSE	canonical	2	6	junction_13	4.50545990716478	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATGTTTTCTTTTATTCT	277	False	55743163	-3	True	AATAAA	-27	NA	55743152	55611539	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_55620267_55620662_55620768_55624341_55624508_55627007_55627129_55628821_55629005_55637169_55637341_55638548_55638677_55639641_55639829_55641112_55641209_55672444_55672634_55673370_55673677_55675518_55675684_55677796_55678045_55679285_55679446_55680053_55680213_55680490_55680629_55682363_55682498_55683786_55683932_55740381_55740685_55742837
H1_mix_00028473	chr15	-	888	3	FSM	ENSG00000166450.13	ENST00000561292.1	833	3	-47	-8	15	8	multi-exon	FALSE	canonical	2	3	junction_1	5.5	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCAGACAGTTGTGGTGA	292	False	55743163	NA	False	AATAAA	-19	NA	55743137	55738214	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_55738500_55740381_55740685_55742837
H1_mix_00028474	chr15	-	5740	29	FSM	ENSG00000069869.17	ENST00000435532.8	5735	29	0	-5	0	5	multi-exon	FALSE	canonical	2	11	junction_15	5.53237226306608	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTGGTTCATTATAAAATA	-6	True	NA	NA	False	AATAAA	-33	NA	55993612	55826916	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_55830000_55830513_55830587_55833007_55833105_55834037_55834146_55834226_55834287_55837788_55837850_55838106_55838181_55838508_55838605_55840446_55840518_55840605_55840728_55841933_55842164_55846968_55847035_55848371_55848431_55848520_55848576_55848805_55848887_55850541_55850743_55852423_55852544_55856130_55856197_55860406_55860575_55860660_55860779_55862912_55863080_55869578_55869682_55872414_55872477_55873957_55874009_55924645_55924700_55951375_55951415_55951510_55951590_55966472_55966547_55993510
H1_mix_00028476	chr15	-	4399	22	FSM	ENSG00000137871.21	ENST00000267807.12	4399	22	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_13	24.3224745130899	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATTTTTCCAATCACTG	-11	True	NA	-12	True	AATAAA	-18	NA	56733509	56630175	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_56632123_56635194_56635251_56642951_56642998_56654197_56654235_56654384_56654504_56658423_56658487_56666394_56666536_56666678_56666987_56668822_56668958_56676669_56676817_56677573_56677675_56678663_56678822_56682253_56682478_56689040_56689151_56689299_56689471_56693097_56693216_56700932_56701073_56701172_56701239_56704120_56704268_56707081_56707151_56707262_56707307_56733457
H1_mix_00028477	chr15	-	3666	6	FSM	ENSG00000137871.21	ENST00000558320.5	3666	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	20.0299775336868	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATATTCTCTGTTTTA	4	True	NA	NA	False	AATAAA	-9	NA	56733494	56697762	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_56701073_56701172_56701239_56704120_56704268_56707081_56707144_56707262_56707307_56733457
H1_mix_00028478	chr15	-	1619	6	ISM	ENSG00000137871.21	ENST00000558002.5	2274	17	13	33322	0	1356	5prime_fragment	FALSE	canonical	3	63	junction_4	8.59302042357633	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGAATGTGTGTTTTTT	4	True	NA	-1	True	ATTAAA	-27	NA	56733494	56699816	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_56701073_56701172_56701239_56704120_56704268_56707081_56707151_56707262_56707307_56733457
H1_mix_00028479	chr15	-	1901	1	FSM	ENSG00000274667.1	ENST00000614966.1	680	1	-924	-297	-924	297	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAACTAATATCAGTCATAA	2094	False	NA	NA	False	AATGAA	-10	NA	56731535	56729634	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_56729600_56731500
H1_mix_00028481	chr15	-	1502	2	FSM	ENSG00000285331.2	ENST00000560587.1	1441	2	0	-61	0	61	multi-exon	FALSE	canonical	3	42	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCTGTCACCAGGCTGGA	971	False	NA	31	True	NA	NA	NA	56918493	56916664	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_56917213_56917539
H1_mix_00028482	chr15	-	4686	17	NNC	ENSG00000137845.15	novel	11158	16	NA	NA	0	37983	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	222.766939591583	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAGAAAGAAAAGGAGAGG	-10	True	NA	NA	False	NA	NA	NA	58749791	58550825	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_58550855_58595393_58597642_58599597_58599725_58610296_58610518_58610998_58611108_58611807_58611992_58621470_58621622_58627699_58627884_58633195_58633360_58640776_58640961_58643885_58643979_58646054_58646205_58665096_58665198_58679123_58679283_58682195_58682315_58717576_58717728_58749479
H1_mix_00028483	chr15	-	11172	16	FSM	ENSG00000137845.15	ENST00000260408.8	11158	16	0	-14	0	14	multi-exon	FALSE	canonical	3	740	junction_9	74.4322510743831	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAATGTTTTCTTTAGCT	-47	True	NA	NA	False	AATAAA	-28	NA	58749707	58588794	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_58597642_58599597_58599725_58610296_58610518_58610998_58611108_58611807_58611992_58621470_58621622_58627699_58627884_58633195_58633360_58640776_58640961_58643885_58643979_58646054_58646205_58665096_58665198_58679123_58679283_58682195_58682315_58717576_58717728_58749479
H1_mix_00028485	chr15	-	3570	20	NIC	ENSG00000137776.17	novel	4168	21	NA	NA	8	0	intron_retention	FALSE	canonical	3	62	junction_14	122.421867219085	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTATGTGTCTTTGTTTTC	445	False	NA	-6	True	AATAAA	-16	NA	58933550	58879049	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_58880108_58883625_58883787_58886974_58887120_58887225_58887541_58888384_58888556_58889429_58889555_58890280_58890462_58892896_58893061_58893278_58893365_58893820_58893988_58894089_58894194_58894432_58894583_58897114_58897234_58898802_58898853_58901259_58901288_58912562_58912611_58913498_58913697_58916934_58917000_58932355_58932444_58933403
H1_mix_00028486	chr15	-	4008	21	NIC	ENSG00000137776.17	novel	4168	21	NA	NA	1	0	intron_retention	FALSE	canonical	3	136	junction_15	105.048560199557	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTATGTGTCTTTGTTTTC	25	True	NA	-6	True	AATAAA	-16	NA	58933573	58879049	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_58880108_58883625_58883787_58886974_58887120_58887225_58887541_58888384_58888556_58889429_58889555_58890280_58890462_58892896_58893061_58893278_58893365_58893820_58893988_58894089_58894194_58894432_58894583_58897114_58897234_58898802_58898853_58899468_58899884_58901259_58901288_58912562_58912611_58913498_58913697_58916934_58917000_58932355_58932444_58933403
H1_mix_00028487	chr15	-	4168	21	FSM	ENSG00000137776.17	ENST00000380516.7	4168	21	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_15	73.5916265617224	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTATGTGTCTTTGTTTTC	0	True	NA	-6	True	AATAAA	-16	NA	58933679	58879049	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_58880108_58883625_58883787_58886974_58887120_58887225_58887541_58888384_58888556_58889429_58889555_58890280_58890462_58892896_58893061_58893278_58893365_58893820_58893988_58894089_58894194_58894432_58894583_58897114_58897234_58898802_58898853_58899468_58899938_58901259_58901288_58912562_58912611_58913498_58913697_58916934_58917000_58932355_58932444_58933403
H1_mix_00028488	chr15	-	2383	13	FSM	ENSG00000137776.17	ENST00000432750.5	2383	13	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_9	162.123324115385	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTGAGAACCTTTTTAAT	2659	False	NA	-1	True	AATAAA	-27	NA	58897120	58879418	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_58880108_58883625_58883787_58886974_58887120_58887225_58887541_58888384_58888556_58889429_58889555_58890280_58890462_58892896_58893061_58893278_58893365_58893901_58893988_58894089_58894194_58894432_58894583_58897114
H1_mix_00028493	chr15	-	8644	28	FSM	ENSG00000157483.9	ENST00000288235.9	8644	28	0	0	0	0	multi-exon	TRUE	canonical	3	224	junction_17	39.0725118171102	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATGTCTTTGGAATATG	-1	True	NA	NA	False	AGTAAA	-20	NA	59372871	59132433	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_59137457_59138197_59138368_59153589_59153792_59158286_59158380_59161072_59161231_59163156_59163304_59171896_59172043_59173745_59173916_59174125_59174241_59178392_59178538_59188117_59188217_59195460_59195568_59202325_59202408_59205399_59205486_59208680_59208849_59210513_59210601_59214227_59214315_59214639_59214721_59217890_59218088_59223058_59223192_59224688_59224824_59227458_59227591_59231701_59231792_59236584_59236673_59256283_59256379_59261419_59261510_59272305_59272450_59372497
H1_mix_00028494	chr15	-	1759	2	FSM	ENSG00000157483.9_ENSG00000259771.1	ENST00000558646.1	578	2	0	-1181	0	1181	multi-exon	FALSE	canonical	3	339	junction_1	0	1019	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTCTTATTTACTATAAG	-1	True	NA	NA	False	NA	NA	NA	59372871	59271064	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_59272450_59372497
H1_mix_00028495	chr15	-	1559	5	FSM	ENSG00000140307.11	ENST00000396060.7	1559	5	0	0	0	0	multi-exon	FALSE	canonical	3	1325	junction_2	103.094616736278	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTCTATGCATGTATTT	8	True	NA	-5	True	AATAAA	-18	NA	59657515	59638061	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_59639158_59642135_59642263_59650668_59650774_59652205_59652327_59657405
H1_mix_00028496	chr15	-	1332	3	FSM	ENSG00000140307.11	ENST00000267869.8	518	3	-17	-797	0	0	multi-exon	FALSE	canonical	3	116	junction_2	690	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTCTATGCATGTATTT	9	True	NA	-5	True	AATAAA	-18	NA	59657514	59638061	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_59639158_59642135_59642263_59657405
H1_mix_00028499	chr15	-	6325	10	FSM	ENSG00000140299.13	ENST00000267859.8	6325	10	0	0	0	0	multi-exon	TRUE	canonical	3	261	junction_1	32.12283522994	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTTTGTCTTTTTATCAC	NA	False	NA	-2	True	AATAAA	-15	NA	59689534	59659145	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_59664121_59668891_59668991_59669275_59669363_59671182_59671315_59672636_59672740_59677910_59678088_59679591_59679769_59680240_59680309_59682407_59682515_59689134
H1_mix_00028500	chr15	-	1696	4	FSM	ENSG00000140299.13	ENST00000477543.1	863	4	-436	-397	-211	-287	multi-exon	FALSE	canonical	3	322	junction_3	18.1169043222683	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTCTTTAATGCTGCT	NA	False	NA	NA	False	NA	NA	NA	59689745	59678858	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_59679769_59680240_59680309_59682407_59682515_59689134
H1_mix_00028501	chr15	-	1695	14	FSM	ENSG00000182718.18	ENST00000677968.1	1761	14	0	66	0	-3	multi-exon	FALSE	canonical	0	0	junction_12	1085.0898689365	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTATCCAAGTGTCGCTAT	2	True	NA	-80	True	AAGAAA	-32	NA	60397984	60347209	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60393238_60393441_60397942
H1_mix_00028502	chr15	-	1569	13	FSM	ENSG00000182718.18	ENST00000451270.7	1554	13	0	-15	0	-2	multi-exon	FALSE	canonical	3	2478	junction_12	225.761842927945	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCACATTTCGAATGCTC	0	True	NA	-6	True	AATAAA	-30	NA	60397986	60347135	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60397942
H1_mix_00028504	chr15	-	1674	14	FSM	ENSG00000182718.18	ENST00000396024.7	1676	14	0	2	0	-2	multi-exon	FALSE	canonical	3	9	junction_13	1078.86460699973	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCACATTTCGAATGCTC	0	True	NA	-6	True	AATAAA	-30	NA	60397986	60347135	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60390212_60390318_60397942
H1_mix_00028505	chr15	-	1783	15	FSM	ENSG00000182718.18	ENST00000557906.6	1790	15	0	7	0	0	multi-exon	FALSE	canonical	2	13	junction_12	1189.91155776643	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCCTGAGTCACACAATCC	0	True	NA	-21	True	AATAAA	-15	NA	60397986	60347150	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60396279_60396428_60397257_60397339_60397942
H1_mix_00028507	chr15	-	1550	13	FSM	ENSG00000182718.18	ENST00000559113.6	1542	13	0	-8	0	-2	multi-exon	FALSE	canonical	3	23	junction_10	1184.48673835266	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCACATTTCGAATGCTC	0	True	NA	-6	True	AATAAA	-30	NA	60397986	60347135	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60386027_60386087_60397257_60397339_60397942
H1_mix_00028508	chr15	-	1445	12	FSM	ENSG00000182718.18	ENST00000558985.6	1445	12	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_10	843.024729302098	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCAAGTGTCGCTATTTA	4859	False	NA	-77	True	AAGAAA	-35	NA	60398033	60347206	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60386027_60386087_60397942
H1_mix_00028509	chr15	-	1553	13	FSM	ENSG00000182718.18	ENST00000679109.1	1560	13	0	7	0	0	multi-exon	FALSE	canonical	2	14	junction_12	836.860249019446	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCCTGAGTCACACAATCC	4735	False	NA	-21	True	AATAAA	-15	NA	60398157	60347150	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60398114
H1_mix_00028510	chr15	-	1446	13	FSM	ENSG00000182718.18	ENST00000332680.8	1444	13	0	-2	0	0	multi-exon	FALSE	canonical	3	33	junction_12	831.732612615911	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTACTTTGTGGCCCTGCTT	1	True	NA	-5	True	AATAAA	-23	NA	60397985	60347329	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60397870
H1_mix_00028511	chr15	-	1444	14	FSM	ENSG00000182718.18	ENST00000421017.6	1444	14	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_13	978.306512876253	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTAGAAACACGTACTTT	0	True	NA	-17	True	AATAAA	-11	NA	60397986	60347341	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60397257_60397339_60397942
H1_mix_00028514	chr15	-	926	3	FSM	ENSG00000182718.18	ENST00000560936.2	908	3	0	-18	0	18	multi-exon	FALSE	canonical	3	28	junction_1	119.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGTTTCCTGGCTAATTT	0	True	NA	NA	False	ATTAAA	-39	NA	60397986	60395626	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_60396428_60397257_60397339_60397942
H1_mix_00028515	chr15	-	7207	16	FSM	ENSG00000128915.12	ENST00000261520.9	7206	16	0	-1	0	1	multi-exon	TRUE	canonical	3	289	junction_13	40.4703457965075	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGTTGCCATGTCCCCT	-26	True	NA	-1	True	AATAAA	-24	NA	60479142	60419607	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_60423763_60428428_60428688_60431933_60431985_60436142_60436228_60442415_60442546_60447969_60448146_60448847_60449842_60453602_60453785_60455002_60455163_60455325_60455443_60456656_60456795_60466593_60466714_60468060_60468323_60476062_60476168_60477936_60478070_60479002
H1_mix_00028516	chr15	-	7061	16	FSM	ENSG00000128915.12	ENST00000558181.5	7060	16	3	-4	3	0	multi-exon	FALSE	canonical	3	126	junction_13	69.506834196358	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACTGTTGCCATGTCCCC	NA	False	NA	-2	True	AATAAA	-23	NA	60479157	60419608	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_60423763_60428428_60428688_60431933_60431985_60436142_60436228_60442415_60442546_60447969_60448146_60448847_60449842_60453602_60453785_60455002_60455163_60455325_60455443_60456656_60456795_60466593_60466714_60468060_60468163_60476062_60476168_60477936_60478070_60479002
H1_mix_00028522	chr15	-	10678	10	FSM	ENSG00000069667.16	ENST00000449337.6	1701	10	24	-9001	0	0	multi-exon	FALSE	canonical	3	16	junction_9	5.89622184952071	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTTGCCTTGTTTTTCTTC	8	True	NA	-1	True	AATAAA	-20	NA	60592517	60488283	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_60497620_60499891_60500005_60500958_60501070_60502759_60502868_60503534_60503668_60505507_60505630_60511225_60511622_60514615_60514758_60531765_60531852_60592386
H1_mix_00028523	chr15	-	4753	4	FSM	ENSG00000129003.19	ENST00000560637.5	3684	4	-1057	-12	-1057	-3	multi-exon	TRUE	canonical	3	50	junction_2	4.32049379893857	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTTGTGGGTTTGTGTT	NA	False	NA	0	True	AATAAA	-29	NA	61865817	61852391	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_61854559_61854870_61854955_61856285_61856410_61863439
H1_mix_00028524	chr15	-	13156	83	FSM	ENSG00000129003.19	ENST00000249837.7	13300	83	141	3	115	-3	multi-exon	TRUE	canonical	2	6	junction_79	14.8390181764231	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTTGTGGGTTTGTGTT	556	False	NA	0	True	AATAAA	-29	NA	62060332	61852391	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_61854559_61854870_61854955_61856285_61856410_61863439_61863529_61868658_61868774_61869499_61869624_61871988_61872035_61873245_61873410_61874875_61874952_61875731_61875846_61876972_61877055_61878606_61878747_61880608_61880723_61880842_61880955_61881562_61881633_61881746_61881829_61882595_61882737_61884127_61884270_61890164_61890401_61907263_61907391_61908991_61909126_61910176_61910306_61911839_61912005_61913310_61913416_61915632_61916023_61917340_61917636_61918135_61918258_61919288_61919450_61920066_61920332_61920497_61920648_61921946_61922034_61922396_61922763_61925455_61925549_61927090_61927321_61929500_61929749_61931089_61931260_61934218_61934332_61936596_61936751_61940646_61940795_61941762_61942068_61945714_61945883_61946306_61946411_61947192_61947310_61949442_61949606_61950357_61950418_61950944_61951025_61951823_61951981_61954420_61954555_61958607_61958717_61959447_61959596_61961588_61961894_61962370_61962539_61962748_61962853_61963834_61963952_61964698_61964862_61966082_61966143_61967367_61967448_61969298_61969453_61972624_61972765_61973453_61973533_61974287_61974418_61977081_61977200_61978625_61978750_61981341_61981479_61982458_61982574_61983819_61984013_61984856_61985000_61990999_61991095_61991672_61991803_62000563_62000627_62007307_62007480_62008654_62008762_62010471_62010600_62012106_62012165_62013038_62013120_62013932_62013993_62020478_62020539_62023410_62023521_62033440_62033543_62034956_62035053_62041323_62041367_62044211_62044256_62060274
H1_mix_00028526	chr15	-	5959	4	FSM	ENSG00000185088.14	ENST00000330964.10	6110	4	-22	173	0	-173	multi-exon	FALSE	canonical	3	2395	junction_3	46.3105459551781	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTATGACTCTATGTTC	-2	True	NA	NA	False	NA	NA	NA	63157499	63148421	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_63154061_63155620_63155732_63156412_63156522_63157399
H1_mix_00028529	chr15	-	3945	11	FSM	ENSG00000074410.14	ENST00000178638.8	6098	11	0	2153	0	1157	multi-exon	FALSE	canonical	2	7	junction_2	5.18555686498567	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGTTCTTTTTTTTTTTT	0	True	NA	1	True	TATAAA	-15	NA	63381846	63323530	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_63326358_63327148_63327234_63328097_63328131_63338818_63338946_63340287_63340446_63340719_63340784_63342001_63342098_63345476_63345620_63346529_63346710_63375657_63375679_63381635
H1_mix_00028531	chr15	-	2565	13	ISM	ENSG00000103657.14	ENST00000443617.7	15197	78	199132	-2	125	2	3prime_fragment	FALSE	canonical	3	72	junction_12	11.8286375659527	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTCTTGGTATTGCTTC	NA	False	NA	-3	True	AATAAA	-21	NA	63634816	63608615	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_63609267_63612250_63612557_63615767_63615921_63616429_63616683_63622814_63622892_63623724_63623891_63624157_63624328_63625984_63626155_63628676_63628816_63630465_63630636_63632708_63632812_63633847_63633971_63634732
H1_mix_00028532	chr15	-	15128	78	NNC	ENSG00000103657.14	novel	15197	78	NA	NA	0	2	intron_retention	FALSE	canonical	0	0	junction_33	29.8375372720412	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTCTTGGTATTGCTTC	16	True	NA	-3	True	AATAAA	-21	NA	63833917	63608615	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_63609267_63612250_63612557_63615767_63615921_63616429_63616683_63622814_63622892_63623724_63623891_63624157_63624328_63625984_63626155_63628676_63628816_63630465_63630636_63632708_63632812_63633847_63633971_63634732_63634889_63635960_63636143_63637504_63637644_63638410_63638537_63638710_63638777_63640151_63640446_63641469_63641644_63642956_63643059_63643403_63643551_63644991_63645098_63645482_63645683_63648068_63648200_63649724_63649926_63651252_63651381_63652413_63652542_63654118_63654325_63655741_63655956_63656087_63656359_63658543_63658719_63659735_63659937_63660972_63661026_63661752_63662022_63663004_63663205_63664469_63664595_63665918_63666151_63666355_63666473_63669537_63669699_63672495_63672695_63674341_63675094_63677844_63678366_63680076_63680161_63680536_63680777_63686358_63686536_63689588_63689700_63690540_63690648_63692410_63692567_63693963_63694158_63694311_63694550_63694773_63694895_63696123_63696340_63698727_63698997_63706779_63706832_63712774_63712896_63713352_63713666_63716301_63716474_63718573_63718695_63718782_63718898_63723181_63723356_63725291_63725514_63727646_63727839_63729235_63729369_63729496_63729650_63732923_63733146_63734723_63734850_63746917_63747084_63747723_63747859_63749366_63749539_63749646_63749792_63752957_63753086_63754504_63754649_63755228_63755326_63756436_63756749_63758174_63758370_63764095_63764192_63774693_63775650_63833821
H1_mix_00028533	chr15	-	15170	78	NIC	ENSG00000103657.14	novel	15197	78	NA	NA	-1	2	intron_retention	FALSE	canonical	0	0	junction_33	29.8270892618953	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTCTTGGTATTGCTTC	-10	True	NA	-3	True	AATAAA	-21	NA	63833943	63608615	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_63609267_63612250_63612557_63615767_63615921_63616429_63616683_63622814_63622892_63623724_63623891_63624157_63624328_63625984_63626155_63628676_63628816_63630465_63630636_63632708_63632812_63633847_63633971_63634732_63634889_63635960_63636143_63637504_63637644_63638410_63638537_63638710_63638777_63640151_63640446_63641469_63641644_63642956_63643059_63643403_63643551_63644991_63645098_63645482_63645683_63648068_63648200_63649724_63649926_63651252_63651381_63652413_63652542_63654118_63654325_63655741_63655956_63656087_63656359_63658543_63658719_63659735_63659937_63660972_63661026_63661752_63662022_63662983_63663205_63664469_63664595_63665918_63666151_63666355_63666473_63669537_63669699_63672495_63672695_63674341_63675094_63677844_63678366_63680076_63680161_63680536_63680777_63686358_63686536_63689588_63689700_63690540_63690648_63692410_63692567_63693963_63694158_63694311_63694550_63694773_63694895_63696123_63696340_63698727_63698997_63706779_63706832_63712774_63712896_63713352_63713666_63716301_63716474_63718573_63718695_63718782_63718898_63723181_63723356_63725291_63725514_63727646_63727839_63729235_63729369_63729496_63729650_63732923_63733146_63734723_63734850_63746917_63747084_63747723_63747859_63749366_63749539_63749646_63749792_63752957_63753086_63754504_63754649_63755228_63755326_63756436_63756749_63758174_63758370_63764095_63764192_63774693_63775650_63833826
H1_mix_00028534	chr15	-	510	4	FSM	ENSG00000103657.14	ENST00000560519.1	591	4	0	81	0	-81	multi-exon	FALSE	canonical	3	15	junction_2	2.49443825784929	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGGCCTTTGCTTGCTGTG	NA	False	NA	NA	False	NA	NA	NA	63749449	63734723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_63734850_63746917_63747084_63747723_63747859_63749366
H1_mix_00028536	chr15	-	429	4	FSM	ENSG00000035664.11	ENST00000557867.1	537	4	108	0	-19	0	multi-exon	FALSE	canonical	3	6	junction_2	1.24721912892465	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGGGTGAGTTCCCTTTC	NA	False	NA	NA	False	NA	NA	NA	63926093	63911851	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_63911992_63912107_63912198_63924815_63924862_63925940
H1_mix_00028537	chr15	-	843	4	FSM	ENSG00000166797.11	ENST00000380290.7	826	4	0	-17	0	4	multi-exon	FALSE	canonical	3	315	junction_2	414.153219097581	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCACTGTTTTTATTGAA	22	True	NA	-18	True	AATAAA	-22	NA	64093808	64072560	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_64073029_64075491_64075538_64088686_64088852_64093644
H1_mix_00028538	chr15	-	923	5	FSM	ENSG00000166797.11	ENST00000300030.8	919	5	0	-4	0	4	multi-exon	FALSE	canonical	3	912	junction_2	120.175912727967	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCACTGTTTTTATTGAA	-8	True	NA	-18	True	AATAAA	-22	NA	64093838	64072560	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_64073029_64075491_64075538_64081101_64081152_64088686_64088852_64093644
H1_mix_00028539	chr15	-	970	5	FSM	ENSG00000166794.6	ENST00000300026.4	893	5	0	-77	0	0	multi-exon	FALSE	canonical	3	5179	junction_4	144.993965391667	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAATGGGTGCCTGCCCC	-26	True	NA	NA	False	NA	NA	NA	64163022	64155739	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_64156146_64156724_64156910_64160103_64160198_64162040_64162155_64162851
H1_mix_00028540	chr15	-	869	5	FSM	ENSG00000166794.6	ENST00000681658.1	869	5	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_4	2151.41052567844	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAATGGGTGCCTGCCCC	-30	True	NA	NA	False	NA	NA	NA	64163026	64155739	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_64156146_64156724_64156910_64160103_64160198_64162040_64162155_64162956
H1_mix_00028541	chr15	-	8080	12	FSM	ENSG00000169118.18	ENST00000303052.13	8085	12	0	5	0	-5	multi-exon	FALSE	canonical	3	20	junction_2	7.2590781009735	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCGAGTGCTGAAGAAGAAA	-45	True	NA	-4	True	AATAAA	-15	NA	64356173	64165529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_64171986_64180347_64180455_64203081_64203190_64204440_64204590_64204864_64204950_64207508_64207595_64213889_64214125_64216561_64216714_64251511_64251582_64259200_64259242_64300318_64300724_64355987
H1_mix_00028542	chr15	-	2152	5	NNC	ENSG00000166803.14	novel	766	5	NA	NA	0	67366	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	638.577471807454	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACGATAGTGCATTTTGG	2	True	NA	NA	False	NA	NA	NA	64381438	64296937	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_64296963_64364305_64366076_64376742_64376906_64380957_64381039_64381325
H1_mix_00028543	chr15	-	2043	3	FSM	ENSG00000166803.14	ENST00000380258.6	911	3	0	-1132	0	71	multi-exon	FALSE	canonical	3	286	junction_1	664.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAACACCTTCCAAACTG	-4	True	NA	53	True	AATACA	-20	NA	64381444	64364232	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_64366076_64380957_64381039_64381325
H1_mix_00028544	chr15	-	2132	4	FSM	ENSG00000166803.14	ENST00000300035.9	2132	4	0	0	0	0	multi-exon	FALSE	canonical	3	1267	junction_2	142.323574997258	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTGTGTGCTTCCTAA	-1	True	NA	-18	True	AATAAA	-27	NA	64381441	64364303	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_64366076_64376742_64376906_64380957_64381039_64381325
H1_mix_00028546	chr15	-	1005	1	FSM	ENSG00000248415.1	ENST00000507324.1	1005	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCCTGGACCACCAGCCC	69	False	NA	NA	False	NA	NA	NA	64529671	64528666	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_64528700_64529700
H1_mix_00028548	chr15	-	1937	5	NIC	ENSG00000180304.14	novel	1934	6	NA	NA	13	15	intron_retention	FALSE	canonical	3	2603	junction_2	157.848622103584	752	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTGAACTAGGACCAACT	NA	False	NA	10	True	AATAAA	-33	NA	64703268	64687557	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_64688835_64689083_64689170_64690373_64690550_64691433_64691592_64703028
H1_mix_00028552	chr15	-	2019	8	FSM	ENSG00000166831.9	ENST00000300069.5	2017	8	0	-2	0	2	multi-exon	FALSE	canonical	3	1300	junction_2	161.68046087444	294	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCGGCCTTTGCTTCCC	-4	True	NA	-9	True	AATAAA	-18	NA	64775589	64739888	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_64741001_64741172_64741243_64748418_64748568_64748999_64749151_64749430_64749494_64750342_64750382_64751560_64751639_64775232
H1_mix_00028553	chr15	-	2692	13	FSM	ENSG00000140451.13	ENST00000559239.2	2690	13	0	-2	0	2	multi-exon	FALSE	canonical	3	23	junction_12	77.9282077014194	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCCTCCTGCCTCCTCTCT	-14	True	NA	-3	True	AATAAA	-22	NA	64825647	64815629	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_64816358_64816573_64816766_64817945_64818092_64818256_64818345_64819116_64819224_64819846_64819987_64820981_64821089_64821166_64821282_64821366_64821521_64822265_64822392_64822477_64822611_64823777_64824355_64825568
H1_mix_00028554	chr15	-	2689	13	FSM	ENSG00000140451.13	ENST00000268043.8	2687	13	0	-2	0	2	multi-exon	FALSE	canonical	3	138	junction_9	53.245239745498	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCCTCCTGCCTCCTCTCT	NA	False	NA	-3	True	AATAAA	-22	NA	64825668	64815629	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_64816358_64816573_64816766_64817945_64818092_64818256_64818345_64819116_64819224_64819846_64819987_64820981_64821089_64821166_64821282_64821366_64821521_64822265_64822392_64822477_64822611_64823777_64824355_64825592
H1_mix_00028556	chr15	-	1631	3	FSM	ENSG00000140451.13	ENST00000560444.1	1631	3	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_2	17	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8	True	NA	NA	False	NA	NA	NA	64825625	64821589	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_64822611_64823777_64824355_64825592
H1_mix_00028560	chr15	-	2746	9	FSM	ENSG00000103707.10	ENST00000220058.9	2746	9	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_2	29.0850047275224	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTGTGTGCAAACTCAT	-14	True	NA	-5	True	AATAAA	-13	NA	65029639	65001511	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_65003257_65004853_65004937_65006112_65006192_65016435_65016528_65020196_65020273_65021513_65021617_65023671_65023795_65026830_65027041_65029404
H1_mix_00028564	chr15	-	2742	4	FSM	ENSG00000103710.11	ENST00000421977.7	1523	4	-328	-891	-280	0	multi-exon	FALSE	canonical	3	19	junction_3	76.8779696806713	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGTTTGCTTGCAGTTC	-11	True	NA	-29	True	AATAAA	-22	NA	65068271	65053336	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_65055275_65058426_65058618_65059344_65059419_65067732
H1_mix_00028565	chr15	-	1381	5	ISM	ENSG00000246922.10	ENST00000559089.6	1707	6	8841	246	-118	3	3prime_fragment	FALSE	canonical	1	2	junction_2	4.18330013267038	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAGTGATGCATACTTA	8886	False	NA	NA	False	ATTAAA	-14	NA	65106359	65093005	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_65093232_65094474_65094577_65099504_65099715_65102105_65102685_65106095
H1_mix_00028567	chr15	-	4700	14	FSM	ENSG00000166855.9	ENST00000300107.7	4695	14	0	-5	0	5	multi-exon	FALSE	canonical	3	208	junction_8	30.1869912026658	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGTGGTGTGTCCATACA	-11	True	NA	NA	False	AATAAA	-25	NA	65185342	65148213	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_65150914_65152429_65152537_65153546_65153640_65154781_65155082_65155691_65155857_65156843_65156933_65157745_65157911_65158574_65158752_65162603_65162646_65164028_65164189_65166630_65166786_65178933_65179052_65180043_65180205_65185074
H1_mix_00028568	chr15	-	2228	14	FSM	ENSG00000166855.9	ENST00000559152.5	2228	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	94.0365030470904	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGTAGATTTTACAATA	422	False	NA	-77	True	NA	NA	NA	65185216	65150513	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_65150914_65152429_65152537_65153546_65153640_65154781_65155082_65155691_65155857_65156777_65156933_65157745_65157911_65158686_65158752_65162603_65162646_65164028_65164189_65166630_65166786_65178933_65179052_65180043_65180205_65185074
H1_mix_00028571	chr15	-	4500	14	NNC	ENSG00000174498.14	novel	4441	14	NA	NA	-62	0	at_least_one_novel_splicesite	FALSE	canonical	3	118	junction_1	42.4162244273881	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGTTTTTGGGTGGTT	4443	False	NA	-6	True	AATAAA	-21	NA	65378064	65327126	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_65329146_65329389_65329598_65329725_65329865_65330292_65330398_65330549_65330742_65331049_65331215_65331411_65331660_65331940_65332107_65333256_65333416_65334727_65334866_65335290_65335422_65335811_65335957_65375096_65375403_65377685
H1_mix_00028572	chr15	-	4504	14	FSM	ENSG00000174498.14	ENST00000327987.9	4441	14	-63	0	-63	0	multi-exon	FALSE	canonical	3	195	junction_1	24.3631305496136	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGTTTTTGGGTGGTT	4442	False	NA	-6	True	AATAAA	-21	NA	65378065	65327126	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_65329149_65329389_65329598_65329725_65329865_65330292_65330398_65330549_65330742_65331049_65331215_65331411_65331660_65331940_65332107_65333256_65333416_65334727_65334866_65335290_65335422_65335811_65335957_65375096_65375403_65377685
H1_mix_00028573	chr15	-	3335	3	FSM	ENSG00000103742.12	ENST00000558048.5	3407	3	84	-12	84	9	multi-exon	FALSE	canonical	2	2	junction_2	21.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTTGGAACCATTGACC	NA	False	NA	-17	True	AATAAA	-24	NA	65385686	65381474	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_65384420_65384953_65385116_65385458
H1_mix_00028575	chr15	-	7385	19	ISM	ENSG00000103742.12	ENST00000352385.3	6363	20	10409	-9	-1453	9	3prime_fragment	FALSE	canonical	3	18	junction_17	6.69069742992204	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTTGGAACCATTGACC	NA	False	NA	-17	True	AATAAA	-24	NA	65412538	65381474	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_65384420_65384953_65385116_65385830_65386060_65386550_65386657_65388448_65388587_65388807_65388979_65389283_65389412_65390154_65390339_65391879_65391982_65392133_65392371_65393360_65393532_65394410_65394549_65395093_65395259_65395749_65396164_65396833_65396990_65400805_65400947_65402350_65402488_65410177_65410320_65411019
H1_mix_00028576	chr15	-	6372	20	FSM	ENSG00000103742.12	ENST00000352385.3	6363	20	0	-9	0	9	multi-exon	FALSE	canonical	2	9	junction_19	8.03937677605475	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTTGGAACCATTGACC	-19	True	NA	-17	True	AATAAA	-24	NA	65422947	65381474	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_65384420_65384953_65385116_65385830_65386060_65386550_65386657_65388448_65388587_65388807_65388979_65389283_65389412_65390154_65390339_65391879_65391982_65392133_65392371_65393360_65393532_65394410_65394549_65395093_65395259_65395749_65396164_65396833_65396990_65400805_65400947_65402350_65402488_65410177_65410320_65411019_65411371_65422792
H1_mix_00028577	chr15	-	7285	20	FSM	ENSG00000074603.19	ENST00000300141.11	7281	20	0	-4	0	0	multi-exon	TRUE	canonical	3	42	junction_4	8.11960453712711	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAAGTGTTCCTTTTTCTT	-14	True	NA	1	True	AATAAA	-22	NA	65517689	65442462	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_65447007_65450998_65451111_65451959_65452103_65454262_65454416_65456224_65456372_65463760_65463907_65466677_65466814_65467070_65467224_65474208_65474289_65478879_65479040_65480221_65480400_65481514_65481616_65485098_65485161_65487689_65487819_65490188_65490300_65497863_65498033_65500605_65500780_65507242_65507356_65512294_65512565_65517485
H1_mix_00028578	chr15	-	2592	12	NIC	ENSG00000138614.16	novel	2419	12	NA	NA	0	25	combination_of_known_junctions	FALSE	canonical	3	28	junction_11	101.188638175774	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAATATAATTTCAACTTT	14	True	NA	43	True	ACTAAA	-30	NA	65611121	65578727	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593573_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605237_65607301_65607443_65610685
H1_mix_00028579	chr15	-	2627	12	FSM	ENSG00000138614.16	ENST00000573314.5	2615	12	13	-25	0	25	multi-exon	FALSE	canonical	3	82	junction_11	64.9954861751222	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAATATAATTTCAACTTT	12	True	NA	43	True	ACTAAA	-30	NA	65611123	65578727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593573_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605237_65607158_65607443_65610795
H1_mix_00028580	chr15	-	2139	11	FSM	ENSG00000138614.16	ENST00000652388.1	2175	11	43	-7	-4	0	multi-exon	FALSE	canonical	2	9	junction_10	87.9027303330221	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGCTTTTGGTCTGTCTT	-3	True	NA	18	True	ACTAAA	-5	NA	65611246	65578752	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593573_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605237_65611097
H1_mix_00028581	chr15	-	2321	12	NIC	ENSG00000138614.16	novel	2304	12	NA	NA	-16	-2	combination_of_known_junctions	FALSE	canonical	3	14	junction_11	83.0561892847992	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAAGGTCGTTTGCTTTTG	73	False	NA	9	True	AATAAA	-37	NA	65611170	65578761	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593573_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605237_65607158_65607426_65611097
H1_mix_00028582	chr15	-	2437	12	NIC	ENSG00000138614.16	novel	2615	12	NA	NA	9	-4	combination_of_known_junctions	FALSE	canonical	3	44	junction_10	91.3418789109092	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAAAGGTCGTTTGCTTT	23	True	NA	7	True	AATAAA	-35	NA	65611112	65578763	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593573_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605237_65607301_65607443_65610795
H1_mix_00028583	chr15	-	2398	12	FSM	ENSG00000138614.16	ENST00000313182.7	2304	12	-114	20	-3	-17	multi-exon	FALSE	canonical	3	118	junction_11	55.8411264657034	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTTCACTATGAAACTAAA	-2	True	NA	-6	True	AATAAA	-22	NA	65611245	65578776	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593573_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605237_65607158_65607443_65611097
H1_mix_00028584	chr15	-	2697	12	NIC	ENSG00000138614.16	novel	2615	12	NA	NA	10	1	combination_of_known_junctions	FALSE	canonical	3	28	junction_11	79.2801289288508	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGTTTGCTTTTGGTCTGT	24	True	NA	15	True	AATAAA	-43	NA	65611111	65578755	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593573_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605237_65607158_65607443_65610685
H1_mix_00028588	chr15	-	395	3	FSM	ENSG00000174485.16	ENST00000562540.1	629	3	234	0	234	0	multi-exon	FALSE	canonical	2	10	junction_2	4.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGTATAGTCAGTGTAT	NA	False	NA	-44	True	NA	NA	NA	65664722	65661820	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_65661988_65664329_65664395_65664559
H1_mix_00028592	chr15	-	1819	9	NNC	ENSG00000075131.10	novel	1728	8	NA	NA	-48	4140	at_least_one_novel_splicesite	TRUE	canonical	1	6	junction_1	71.1528943543409	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGCACCATTGCATTAGA	NA	False	NA	32	True	NA	NA	NA	66356733	66332050	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_66332197_66336293_66337182_66341149_66341357_66349059_66349124_66349314_66349438_66351524_66351601_66352128_66352208_66352814_66352956_66356638
H1_mix_00028593	chr15	-	1945	8	FSM	ENSG00000075131.10	ENST00000261881.9	1728	8	-60	-157	-60	157	multi-exon	FALSE	canonical	3	186	junction_7	18.8593072350963	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTCAAAGAATGCTTTTT	NA	False	NA	NA	False	NA	NA	NA	66356745	66336033	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_66337182_66341149_66341357_66349059_66349124_66349314_66349438_66351524_66351601_66352128_66352208_66352814_66352956_66356638
H1_mix_00028595	chr15	-	579	1	FSM	ENSG00000240821.1	ENST00000489563.1	579	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTAAGAGTTATCCAGCT	7606	False	NA	NA	False	AAAAAG	-27	NA	66379915	66379336	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_66379300_66379900
H1_mix_00028596	chr15	-	857	1	FSM	ENSG00000243404.2	ENST00000469688.2	323	1	-202	-332	-202	332	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTGATTAGCTGGGATTA	NA	False	NA	NA	False	NA	NA	NA	66446979	66446122	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_66446100_66447000
H1_mix_00028598	chr15	-	1075	3	FSM	ENSG00000174446.13	ENST00000565465.1	1069	3	21	-27	0	27	multi-exon	FALSE	canonical	3	22	junction_2	163	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCCTGCTGGTTTCTAG	13	True	NA	-3	True	AATAAA	-18	NA	66497738	66493816	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_66494553_66495329_66495420_66497489
H1_mix_00028599	chr15	-	3218	3	FSM	ENSG00000261351.2_ENSG00000174446.13	ENST00000316634.6	1296	3	0	-1922	0	-910	multi-exon	FALSE	canonical	3	348	junction_1	14	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCTTTCATCCTTTTTTT	-11	True	NA	NA	False	ACTAAA	-31	NA	66497762	66491545	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_66494553_66495329_66495420_66497641
H1_mix_00028600	chr15	-	794	2	FSM	ENSG00000174446.13	ENST00000307979.7	794	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCACTTGAGACATCACT	-11	True	NA	-66	True	TATAAA	-24	NA	66497762	66493879	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_66494553_66497641
H1_mix_00028601	chr15	-	2741	10	FSM	ENSG00000174444.15	ENST00000307961.11	2741	10	0	0	0	0	multi-exon	FALSE	canonical	3	8802	junction_7	641.677970078411	2818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCTTCAGGTTCTTTAC	-5	True	NA	NA	False	ATTAAA	-17	NA	66504855	66498014	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_66499653_66500055_66500177_66500292_66500377_66500948_66501106_66501374_66501505_66501787_66501913_66502611_66502751_66503057_66503165_66503357_66503530_66504787
H1_mix_00028602	chr15	-	2003	8	FSM	ENSG00000174444.15	ENST00000567229.5	2003	8	0	0	0	0	multi-exon	FALSE	canonical	3	9520	junction_7	488.186983247449	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGACTTGGTGTGCTCTGT	4	True	NA	-23	True	AATAAA	-27	NA	66504846	66499319	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_66499653_66500055_66500177_66500292_66500377_66500948_66501505_66501787_66501913_66502611_66503165_66503357_66503530_66504787
H1_mix_00028605	chr15	-	1099	6	FSM	ENSG00000174444.15	ENST00000566039.5	1099	6	0	0	0	0	multi-exon	FALSE	canonical	3	8802	junction_3	813.05857107591	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTAGATGAATTGTACGG	4	True	NA	NA	False	NA	NA	NA	66504846	66501007	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_66501505_66501787_66501913_66502611_66502751_66503057_66503165_66503357_66503530_66504787
H1_mix_00028607	chr15	-	580	3	FSM	ENSG00000174444.15	ENST00000561554.5	580	3	0	0	0	0	multi-exon	FALSE	canonical	3	8802	junction_1	359	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCATCGTAGAGTGAACACA	4	True	NA	NA	False	NA	NA	NA	66504846	66502701	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_66502751_66503057_66503530_66504787
H1_mix_00028608	chr15	-	2552	12	FSM	ENSG00000188501.11	ENST00000537670.5	2552	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	9.68853800090815	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCATGCATTTTTCTCA	17	True	NA	NA	False	GATAAA	-16	NA	66565964	66547467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_66548606_66550040_66550105_66551661_66551862_66552042_66552170_66552983_66553259_66557721_66557884_66557981_66558037_66561005_66561102_66561186_66561316_66563515_66563626_66563910_66563999_66565856
H1_mix_00028609	chr15	-	3294	10	FSM	ENSG00000103591.13	ENST00000261880.10	3132	10	0	-162	0	162	multi-exon	FALSE	canonical	3	414	junction_3	66.4632080529623	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTGGAAGGTAAGGGAAGA	-6	True	NA	-45	True	NA	NA	NA	67254661	67200504	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_67202899_67203547_67203598_67204043_67204149_67208561_67208659_67209461_67209545_67231813_67231898_67235978_67236069_67236407_67236505_67236629_67236821_67254558
H1_mix_00028610	chr15	-	3538	10	FSM	ENSG00000103591.13	ENST00000561452.5	2251	10	14	-1301	0	261	multi-exon	FALSE	canonical	3	26	junction_9	149.07045314213	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTAAAATATGCCATCT	-6	True	NA	54	True	NA	NA	NA	67254661	67200405	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_67202899_67203547_67203598_67204043_67204149_67208561_67208659_67209461_67209545_67231813_67231898_67235978_67236069_67236407_67236505_67236629_67236821_67254413
H1_mix_00028611	chr15	-	289	3	NNC	ENSG00000259673.6	novel	740	2	NA	NA	9	3466	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	14	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTCTACAGGTAGTACT	95	False	NA	-2	True	AATAAA	-18	NA	67521532	67514919	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_67515067_67518999_67519103_67521493
H1_mix_00028613	chr15	-	356	3	NNC	ENSG00000259673.6	novel	740	2	NA	NA	10	3465	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	7	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGTTCTACAGGTAGTAC	-25	True	NA	-3	True	AATAAA	-17	NA	67521652	67514920	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_67515067_67518999_67519103_67521545
H1_mix_00028614	chr15	-	1565	1	FSM	ENSG00000270964.1	ENST00000604760.1	1533	1	-13	-19	-13	19	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAAAAGTTCATTTCCTA	NA	False	NA	NA	False	AATAAA	-29	NA	67542617	67541052	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_67541100_67542600
H1_mix_00028615	chr15	-	3389	3	FSM	ENSG00000260007.3	ENST00000562767.2	3389	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	31	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTAAGCTTTGTATTTA	-16	True	NA	NA	False	NA	NA	NA	68229718	68191129	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_68194113_68197439_68197629_68229501
H1_mix_00028619	chr15	-	2228	7	FSM	ENSG00000128973.13	ENST00000249806.11	2228	7	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	7.35791335154804	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGTTAGAGGTGTTTTT	-26	True	NA	-6	True	AGTAAA	-18	NA	68229728	68206991	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_68208411_68209636_68209760_68211262_68211319_68211674_68211864_68214289_68214389_68218535_68218651_68229501
H1_mix_00028620	chr15	-	475	1	FSM	ENSG00000260657.2	ENST00000612894.1	502	1	23	4	23	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATTATGTGCTTTGGGGT	NA	False	NA	-6	True	AATAAA	-15	NA	68268270	68267795	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_68267800_68268300
H1_mix_00028621	chr15	-	2452	7	FSM	ENSG00000140350.15	ENST00000465139.6	2440	7	0	-12	0	12	multi-exon	FALSE	canonical	3	2475	junction_4	227.435705200393	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATGGTGTTTTATTTTGT	0	True	NA	1	True	TATAAA	-30	NA	68820895	68778522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_68780143_68780409_68780474_68782955_68783054_68784396_68784596_68787412_68787536_68787769_68787920_68820697
H1_mix_00028622	chr15	-	1995	2	FSM	ENSG00000140350.15	ENST00000486054.1	2015	2	20	0	20	0	multi-exon	FALSE	canonical	3	2863	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCTATCTTGTTCTGTA	1489	False	NA	18	True	AAGAAA	-41	NA	68781585	68779323	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_68780143_68780409
H1_mix_00028623	chr15	-	5699	20	FSM	ENSG00000140332.18	ENST00000557997.5	3683	20	0	-2016	0	7	multi-exon	FALSE	canonical	3	74	junction_14	34.9773967377287	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTGTGAACATCTGGAC	11	True	NA	1	True	ATTAAA	-29	NA	70097888	70047782	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_70050205_70051390_70051468_70052373_70052525_70053226_70053375_70054437_70054686_70055048_70055299_70056297_70056375_70057473_70057659_70058158_70058292_70058662_70058816_70059409_70059461_70060529_70060650_70064453_70064471_70066013_70066219_70074532_70074608_70076095_70076159_70094531_70094577_70095577_70095642_70096160_70096262_70096774
H1_mix_00028624	chr15	-	5700	20	NIC	ENSG00000140332.18	novel	5736	20	NA	NA	0	-4	intron_retention	FALSE	canonical	3	7	junction_14	44.7506480245254	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACTGCAAAGTGTCTGTG	11	True	NA	-10	True	ATTAAA	-18	NA	70097888	70047793	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_70050205_70051390_70051468_70052373_70052525_70053226_70053375_70054437_70054686_70055048_70055299_70056297_70056375_70057458_70057659_70058158_70058292_70058662_70058816_70059409_70059461_70060529_70060650_70064453_70064471_70066013_70066216_70074532_70074608_70076095_70076159_70094531_70094577_70095577_70095642_70096160_70096262_70096774
H1_mix_00028626	chr15	-	5752	20	FSM	ENSG00000140332.18	ENST00000558939.5	6004	20	259	-7	0	7	multi-exon	FALSE	canonical	3	25	junction_8	43.493814633317	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTGTGAACATCTGGAC	-18	True	NA	1	True	ATTAAA	-29	NA	70097917	70047782	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_70050205_70051390_70051468_70052373_70052525_70053226_70053375_70054437_70054686_70055048_70055299_70056297_70056375_70057458_70057659_70058149_70058292_70058662_70058816_70059409_70059461_70060529_70060650_70064453_70064471_70066013_70066219_70074532_70074608_70076095_70076159_70094531_70094577_70095577_70095642_70096160_70096262_70096774
H1_mix_00028627	chr15	-	5207	20	FSM	ENSG00000140332.18	ENST00000317509.12	5207	20	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	45.7934662506185	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAGAAAAAAAGAATGAAAA	-1	True	NA	-77	True	AAGAAA	-10	NA	70097900	70048274	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_70050205_70051390_70051468_70052373_70052525_70053226_70053375_70054437_70054686_70055048_70055299_70056297_70056375_70057458_70057659_70058185_70058292_70058662_70058816_70059409_70059461_70060529_70060650_70064453_70064471_70066013_70066219_70074532_70074608_70076095_70076159_70094531_70094577_70095577_70095642_70096160_70096262_70096774
H1_mix_00028629	chr15	-	3408	20	FSM	ENSG00000140332.18	ENST00000559929.5	3408	20	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_14	50.106479419117	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAAGTTAGAAGACAGCA	2680	False	NA	-86	True	AAAAAG	-3	NA	70096851	70049090	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_70050205_70051390_70051468_70052373_70052525_70053226_70053375_70054437_70054686_70055048_70055299_70056297_70056375_70057458_70057659_70058149_70058292_70058662_70058816_70059409_70059461_70060529_70060650_70064453_70064471_70066013_70066219_70074502_70074608_70076095_70076159_70094531_70094577_70095577_70095642_70096160_70096262_70096774
H1_mix_00028634	chr15	-	206	1	FSM	ENSG00000274297.1	ENST00000621778.1	588	1	230	152	230	-152	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTACTCATTGTCATTAA	4928	False	NA	NA	False	TTTAAA	-19	NA	70758626	70758420	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_70758400_70758600
H1_mix_00028635	chr15	-	2718	3	FSM	ENSG00000166173.11	ENST00000299213.10	4467	3	0	1749	0	-1749	multi-exon	FALSE	canonical	3	73	junction_2	5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTAGCTCTCTTTCCTTCT	9	True	NA	NA	False	CATAAA	-1	NA	70854157	70830878	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_70833117_70836294_70836506_70853888
H1_mix_00028636	chr15	-	548	2	FSM	ENSG00000166173.11	ENST00000344870.4	527	2	0	-21	0	21	multi-exon	FALSE	canonical	3	101	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTCCTTCATTAAAAAGAT	625	False	NA	18	True	AAGAAA	-42	NA	70854121	70851405	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_70851721_70853888
H1_mix_00028638	chr15	-	889	1	FSM	ENSG00000242276.2	ENST00000493817.2	889	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACCAAACAATTTTCTAT	NA	False	NA	NA	False	NA	NA	NA	71063989	71063100	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_71063100_71064000
H1_mix_00028641	chr15	-	12716	43	NIC	ENSG00000066933.16	novel	12478	42	NA	NA	-25	0	intron_retention	TRUE	canonical	3	13	junction_19	10.166638786624	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATATGTGTGGTTTGTTT	3	True	NA	-4	True	ATTAAA	-21	NA	72118175	71822290	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_71827044_71827883_71828027_71830108_71830312_71848844_71848969_71850035_71850168_71851252_71851359_71852131_71852261_71854376_71854570_71859734_71859797_71862499_71862612_71875790_71875839_71878039_71878232_71879720_71879838_71880334_71880559_71883593_71883737_71888003_71888117_71892964_71893178_71893678_71893779_71897460_71899033_71899686_71900007_71901190_71901341_71902940_71903064_71903928_71904040_71904925_71905007_71916369_71916493_71933669_71933710_71935340_71935485_71938851_71938928_71951776_71951897_71959900_71960097_71967983_71968126_71978170_71978293_71991102_71991238_71994468_71994586_71999850_71999941_72007825_72007953_72010349_72010448_72019038_72019096_72020917_72021018_72027730_72027794_72032493_72032589_72045723_72046635_72117679
H1_mix_00028643	chr15	-	8852	25	FSM	ENSG00000066933.16	ENST00000563542.5	8864	25	2	10	2	-10	multi-exon	FALSE	canonical	3	9	junction_21	10.4681229082497	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATGTCTCTTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72046634	71889481	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_71893178_71893678_71893779_71897460_71899033_71899686_71900007_71901190_71901341_71902940_71903064_71903928_71904040_71904925_71905007_71916369_71916493_71933669_71933710_71935340_71935485_71938851_71938928_71951776_71951897_71959900_71960097_71967983_71968126_71978170_71978293_71991102_71991238_71994468_71994586_71999850_71999941_72007825_72007953_72010349_72010448_72020917_72021018_72027730_72027794_72032493_72032589_72045723
H1_mix_00028646	chr15	-	3747	14	FSM	ENSG00000066933.16	ENST00000567560.5	4056	14	0	309	0	-292	multi-exon	FALSE	canonical	3	22	junction_8	8.88852727732572	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATTAATGATAAACAACCT	-24	True	NA	NA	False	NA	NA	NA	72118081	71958808	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_71960097_71967983_71968126_71978170_71978293_71991102_71991238_71994468_71994586_71999850_71999941_72007825_72007953_72010349_72010448_72019038_72019096_72020917_72021018_72027730_72027794_72032493_72032589_72045723_72046635_72117679
H1_mix_00028647	chr15	-	3249	12	FSM	ENSG00000175318.12	ENST00000309731.12	3284	12	0	35	0	-33	multi-exon	FALSE	canonical	1	6	junction_2	4.61760912698193	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATTTTAAAATAAAAAACTT	1	True	NA	-35	True	NA	NA	NA	72197787	72159840	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_72162013_72162272_72162378_72163265_72163477_72163612_72163758_72165353_72165411_72166631_72166704_72166993_72167093_72167735_72167840_72168490_72168567_72168938_72168997_72169846_72169940_72197730
H1_mix_00028649	chr15	-	3016	3	FSM	ENSG00000067225.20	ENST00000564440.5	3016	3	0	0	0	0	multi-exon	FALSE	canonical	3	11156	junction_2	590.5	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTCTCTTTTCTGCT	5857	False	NA	-5	True	AATAAA	-17	NA	72204559	72199028	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_72199757_72200473_72200656_72202453
H1_mix_00028650	chr15	-	2305	11	FSM	ENSG00000067225.20	ENST00000335181.10	2305	11	0	0	0	0	multi-exon	FALSE	canonical	2	6951	junction_5	1806.36751520835	2534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTCTCTTTTCTGCT	10	True	NA	-5	True	AATAAA	-17	NA	72231190	72199028	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_72199757_72200473_72200656_72202453_72202621_72206727_72206881_72207126_72207278_72208620_72208892_72209672_72209860_72210346_72210479_72217408_72217501_72218943_72219111_72231115
H1_mix_00028651	chr15	-	2717	11	FSM	ENSG00000067225.20	ENST00000319622.10	2717	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	5296.82586460986	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTCTCTTTTCTGCT	6	True	NA	-5	True	AATAAA	-17	NA	72231386	72199028	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_72199757_72200473_72200656_72203021_72203189_72206727_72206881_72207126_72207278_72208620_72208892_72209672_72209860_72210346_72210479_72217408_72217501_72218943_72219111_72230899
H1_mix_00028652	chr15	-	2503	11	FSM	ENSG00000067225.20	ENST00000565184.6	2503	11	0	0	0	0	multi-exon	FALSE	canonical	2	142	junction_10	5274.4646022132	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTTTCCTCTCTTTTCT	6372	False	NA	-8	True	AATAAA	-14	NA	72231171	72199031	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_72199757_72200473_72200656_72203021_72203189_72206727_72206881_72207126_72207278_72208620_72208892_72209672_72209860_72210346_72210479_72217408_72217501_72218943_72219111_72230895
H1_mix_00028653	chr15	-	2301	2	FSM	ENSG00000067225.20	ENST00000565143.1	2301	2	0	0	0	0	multi-exon	FALSE	canonical	3	12337	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACCTGTTTCCTCTCTT	8363	False	NA	-12	True	AATAAA	-10	NA	72202053	72199035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_72199757_72200473
H1_mix_00028658	chr15	-	1894	19	FSM	ENSG00000137817.17	ENST00000564610.5	1876	19	0	-18	0	0	multi-exon	FALSE	canonical	0	0	junction_13	49.5056113542248	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATCACTGTGGTTTGAC	7078	False	NA	-6	True	AATAAA	-31	NA	72265929	72241180	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_72241558_72241900_72241986_72242156_72242221_72242619_72242700_72250019_72250093_72250844_72250955_72251206_72251256_72253436_72253505_72254454_72254521_72256464_72256591_72257347_72257441_72258036_72258133_72259607_72259662_72260537_72260689_72261557_72261708_72264554_72264622_72265080_72265172_72265412_72265474_72265896
H1_mix_00028659	chr15	-	1968	20	FSM	ENSG00000137817.17	ENST00000567974.5	1950	20	0	-18	0	0	multi-exon	FALSE	canonical	0	0	junction_14	62.7428909129218	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATCACTGTGGTTTGAC	7077	False	NA	-6	True	AATAAA	-31	NA	72265930	72241180	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_72241558_72241900_72241986_72242156_72242221_72242619_72242700_72249244_72249315_72250019_72250093_72250844_72250958_72251206_72251256_72253436_72253505_72254454_72254521_72256464_72256591_72257347_72257441_72258036_72258133_72259607_72259662_72260537_72260689_72261557_72261708_72264554_72264622_72265080_72265172_72265412_72265474_72265896
H1_mix_00028660	chr15	-	2108	21	FSM	ENSG00000137817.17	ENST00000616176.4	2102	21	0	-6	0	5	multi-exon	FALSE	canonical	3	9	junction_5	58.0162692699212	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTGGTTTGACTAGCC	5484	False	NA	-1	True	AATAAA	-36	NA	72267523	72241175	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_72241558_72241900_72241986_72242156_72242221_72242619_72242700_72249244_72249315_72250019_72250093_72251206_72251256_72253436_72253505_72254454_72254521_72256464_72256591_72257347_72257441_72258036_72258133_72259607_72259662_72260477_72260689_72261557_72261708_72264554_72264622_72265080_72265172_72265412_72265474_72265896_72265992_72266744_72266823_72267474
H1_mix_00028661	chr15	-	2756	19	FSM	ENSG00000137817.17	ENST00000413097.6	2750	19	0	-6	0	5	multi-exon	FALSE	canonical	0	0	junction_12	50.1622060278478	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTGGTTTGACTAGCC	5358	False	NA	-1	True	AATAAA	-36	NA	72267649	72241175	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_72241558_72241900_72241986_72242156_72242221_72242619_72242700_72250019_72250093_72251206_72251256_72253436_72253505_72254454_72254521_72256464_72256591_72257347_72257441_72258036_72258133_72259607_72259662_72260537_72260689_72261557_72261708_72264554_72264622_72265080_72265172_72265412_72265474_72265896_72265992_72266744
H1_mix_00028662	chr15	-	2531	22	NIC	ENSG00000137817.17	novel	2788	24	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	53.0431732769875	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATCACTGTGGTTTGAC	10	True	NA	-6	True	AATAAA	-31	NA	72272537	72241180	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_72241558_72241900_72241986_72242156_72242221_72242619_72242700_72250019_72250093_72251206_72251256_72253436_72253505_72254454_72254521_72256464_72256591_72257347_72257441_72258036_72258133_72259607_72259662_72260537_72260689_72261557_72261708_72264554_72264622_72265080_72265172_72265412_72265474_72265896_72265992_72266744_72266823_72267474_72267672_72271022_72271288_72272392
H1_mix_00028663	chr15	-	2793	24	FSM	ENSG00000137817.17	ENST00000569795.6	2788	24	0	-5	0	5	multi-exon	FALSE	canonical	3	9	junction_5	57.8551087682498	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTGGTTTGACTAGCC	-7	True	NA	-1	True	AATAAA	-36	NA	72272554	72241175	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_72241558_72241900_72241986_72242156_72242221_72242619_72242700_72249244_72249315_72250019_72250093_72250844_72250955_72251206_72251256_72253436_72253505_72254454_72254521_72256464_72256591_72257347_72257441_72258036_72258133_72259607_72259662_72260477_72260689_72261557_72261708_72264554_72264622_72265080_72265172_72265412_72265474_72265896_72265992_72266744_72266823_72267474_72267672_72271022_72271288_72272392
H1_mix_00028664	chr15	-	3931	21	NIC	ENSG00000137817.17	novel	2788	24	NA	NA	-201	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_12	44.0458851653591	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATCACTGTGGTTTGAC	-12	True	NA	-6	True	AATAAA	-31	NA	72272772	72241180	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_72241558_72241900_72241986_72242156_72242221_72242619_72242700_72250019_72250093_72251206_72251256_72253436_72253505_72254454_72254521_72256464_72256591_72257347_72257441_72258036_72258133_72259607_72259662_72260477_72260689_72261557_72261708_72264554_72264622_72265080_72265172_72265412_72265474_72265896_72265992_72266744_72266823_72267474_72267672_72271022
H1_mix_00028665	chr15	-	4004	22	NIC	ENSG00000137817.17	novel	2305	22	NA	NA	170	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	48.203837786262	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAACAATAAAATGGA	178	False	NA	-43	True	NA	NA	NA	72272829	72241217	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_72241558_72241900_72241986_72242156_72242221_72242619_72242700_72250019_72250093_72250844_72250958_72251206_72251256_72253436_72253505_72254454_72254521_72256464_72256591_72257347_72257441_72258036_72258133_72259607_72259662_72260537_72260689_72261557_72261708_72264554_72264622_72265080_72265172_72265412_72265474_72265896_72265992_72266744_72266823_72267474_72267672_72271022
H1_mix_00028667	chr15	-	4781	14	FSM	ENSG00000213614.11	ENST00000268097.10	4785	14	0	4	0	-4	multi-exon	FALSE	canonical	3	344	junction_6	37.7420394051718	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATCTTTTCTAGCCGAGC	-28	True	NA	-16	True	AATAAA	-24	NA	72376014	72340927	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_72344141_72345445_72345551_72346234_72346326_72346526_72346711_72347685_72347759_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72353690_72353738_72355558_72355625_72356524_72356618_72375719
H1_mix_00028668	chr15	-	2076	12	FSM	ENSG00000213614.11	ENST00000684231.1	2075	12	0	-1	0	0	multi-exon	FALSE	canonical	3	28	junction_9	109.635986732354	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATATTGTTCTCTAGGCA	-6	True	NA	-33	True	ATTAAA	-1	NA	72375992	72343452	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_72344141_72345445_72345551_72346234_72346326_72346526_72346711_72347685_72347759_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72355558_72355625_72356524_72356618_72375719
H1_mix_00028670	chr15	-	572	3	FSM	ENSG00000213614.11	ENST00000564677.5	572	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	184.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGGATTACCTGTGTTT	NA	False	NA	-31	True	AATAAA	-27	NA	72345889	72343886	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_72344141_72345445_72345551_72345676
H1_mix_00028672	chr15	-	532	1	FSM	ENSG00000243007.1	ENST00000477007.1	496	1	39	-75	39	75	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATGTTATTATTTTTTAT	125	False	NA	NA	False	AAAAAG	-24	NA	72379671	72379139	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_72379100_72379700
H1_mix_00028674	chr15	-	2776	7	FSM	ENSG00000159322.18	ENST00000567941.5	2716	7	0	-60	0	-15	multi-exon	FALSE	canonical	3	38	junction_6	86.0982965375429	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCTGATCTTCATTTGT	3	True	NA	48	True	GATAAA	-3	NA	72783731	72751308	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_72752893_72755555_72755655_72756250_72756448_72760406_72760528_72771782_72771846_72774871_72775098_72783245
H1_mix_00028676	chr15	-	2589	7	FSM	ENSG00000159322.18	ENST00000311669.12	2557	7	28	-60	1	-15	multi-exon	FALSE	canonical	3	134	junction_1	54.4875113112068	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCTGATCTTCATTTGT	-23	True	NA	48	True	GATAAA	-3	NA	72783757	72751308	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_72752893_72755555_72755655_72756250_72756448_72760406_72760528_72771782_72771846_72774871_72775098_72783458
H1_mix_00028677	chr15	-	2303	5	FSM	ENSG00000159322.18	ENST00000569534.5	2262	5	19	-60	1	-15	multi-exon	FALSE	canonical	3	22	junction_4	82.8507694593116	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCTGATCTTCATTTGT	-23	True	NA	48	True	GATAAA	-3	NA	72783757	72751308	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_72752896_72755555_72755655_72756250_72756448_72760406_72760528_72783458
H1_mix_00028683	chr15	-	2817	8	FSM	ENSG00000156642.17	ENST00000351217.10	2817	8	0	0	0	0	multi-exon	FALSE	canonical	3	963	junction_1	89.5001995209269	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGATAATACTCTTTATT	NA	False	NA	-13	True	AATAAA	-17	NA	73634134	73560013	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_73561049_73561895_73561971_73563235_73563258_73570149_73570424_73573661_73573796_73587523_73587619_73591965_73592138_73633124
H1_mix_00028684	chr15	-	858	6	FSM	ENSG00000156642.17	ENST00000565325.5	858	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	428.590900510032	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTGTTAAAATATTTAAAT	-2	True	NA	NA	False	NA	NA	NA	73633245	73560816	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_73561049_73561895_73561971_73563235_73563258_73570149_73570424_73573661_73573796_73633124
H1_mix_00028686	chr15	-	7150	3	FSM	ENSG00000205363.7	ENST00000569673.3	7150	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	1.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACGAGCCCCATTTGCAG	-18	True	NA	-36	True	AATAAA	-16	NA	73753351	73735457	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_73740643_73750974_73751698_73752109
H1_mix_00028689	chr15	-	3429	3	FSM	ENSG00000261801.7	ENST00000562739.6	3429	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	8	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCACACCTGGATTCCTG	9	True	NA	-63	True	NA	NA	NA	73927697	73916199	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_73919384_73919837_73920039_73927653
H1_mix_00028690	chr15	-	539	3	FSM	ENSG00000261801.7	ENST00000688623.1	701	3	162	0	-18	0	multi-exon	FALSE	canonical	3	15	junction_1	31	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGTTTTGGGGTAATTTG	594	False	NA	-1	True	AATAAA	-18	NA	73927804	73916137	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_73916448_73919837_73920039_73927776
H1_mix_00028692	chr15	-	4064	2	FSM	ENSG00000261801.7	ENST00000562965.1	1183	2	20	-2901	0	-1	multi-exon	FALSE	canonical	3	77	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCGGTTTTGGGGTAATTT	-1	True	NA	-2	True	AATAAA	-17	NA	73927940	73916138	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_73920039_73927776
H1_mix_00028695	chr15	-	6025	7	FSM	ENSG00000067221.14	ENST00000541638.6	6280	7	0	255	0	-255	multi-exon	FALSE	canonical	3	12	junction_2	5.13160143944688	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTGATCACATTTCACTTT	-3	True	NA	NA	False	NA	NA	NA	73992295	73979180	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_73984131_73984658_73984872_73985317_73985514_73988598_73988803_73989107_73989258_73990350_73990458_73992090
H1_mix_00028696	chr15	-	1849	6	FSM	ENSG00000067221.14	ENST00000564777.5	1849	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	7.2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAAGCGGGGCTCCTGGGG	-5	True	NA	2	True	AATAAA	-32	NA	73992297	73983205	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_73984131_73984658_73984869_73985317_73985514_73988598_73988803_73990350_73990458_73992090
H1_mix_00028697	chr15	-	1793	7	FSM	ENSG00000067221.14	ENST00000561656.5	1833	7	40	0	26	0	multi-exon	FALSE	canonical	1	1	junction_6	7.71902411793961	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGTGTTTACAATGTATA	3	False	NA	-29	True	AATAAA	-1	NA	73994582	73983236	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_73984131_73984658_73984869_73985317_73985514_73988598_73988803_73989107_73989258_73990350_73990458_73994550
H1_mix_00028700	chr15	-	3024	19	FSM	ENSG00000137868.19	ENST00000563965.5	2565	19	53	-512	-18	3	multi-exon	FALSE	canonical	3	10	junction_18	17.7239636901256	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCATAGCGGGAGGGGTA	9453	False	NA	-7	True	AATAAA	-19	NA	74202805	74179462	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74180244_74180781_74180938_74181294_74181459_74182160_74182263_74182342_74182461_74183855_74183990_74184979_74185056_74189114_74189278_74190839_74190902_74191166_74191244_74191423_74191492_74193799_74193923_74195301_74195469_74195651_74195676_74196007_74196148_74197337_74197424_74197751_74197819_74202154_74202283_74202417
H1_mix_00028705	chr15	-	1806	11	FSM	ENSG00000138629.16	ENST00000567435.5	1720	11	-80	-6	0	6	multi-exon	FALSE	canonical	3	88	junction_10	186.135864357195	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCAGTTCTTGACCTTTC	-29	True	NA	0	True	AATATA	-24	NA	74461182	74445970	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74446228_74448477_74448601_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74460667
H1_mix_00028706	chr15	-	1484	12	FSM	ENSG00000138629.16	ENST00000564488.5	1477	12	-7	0	0	0	multi-exon	FALSE	canonical	3	10	junction_11	252.587796699133	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTTTGTCCAGTTCTTG	28	True	NA	-7	True	AATATA	-17	NA	74461125	74445977	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74446228_74448477_74448601_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74460667_74460779_74461036
H1_mix_00028707	chr15	-	1415	11	FSM	ENSG00000138629.16	ENST00000395081.7	1409	11	0	-6	0	6	multi-exon	TRUE	canonical	3	324	junction_10	117.606802524344	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCAGTTCTTGACCTTTC	-7	True	NA	0	True	AATATA	-24	NA	74461160	74445970	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74446228_74448477_74448601_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74461036
H1_mix_00028708	chr15	-	1366	11	FSM	ENSG00000138629.16	ENST00000361351.8	1360	11	0	-6	0	6	multi-exon	FALSE	canonical	3	261	junction_10	135.672583818545	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCAGTTCTTGACCTTTC	-29	True	NA	0	True	AATATA	-24	NA	74461182	74445970	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74446228_74448477_74448601_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74461107
H1_mix_00028709	chr15	-	3829	9	FSM	ENSG00000179151.13	ENST00000647659.1	3810	9	0	-19	0	2	multi-exon	FALSE	canonical	3	14	junction_7	131.344430315868	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCCGTGTGACTTGCT	83	False	NA	0	True	AATAAA	-20	NA	74695936	74630555	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74632947_74635408_74635627_74640465_74640620_74655732_74656069_74671454_74671775_74674960_74675143_74676940_74677023_74687090_74687180_74695879
H1_mix_00028710	chr15	-	3746	7	FSM	ENSG00000179151.13	ENST00000315127.9	3744	7	0	-2	0	2	multi-exon	FALSE	canonical	3	232	junction_6	44.4800204836084	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCCGTGTGACTTGCT	-5	True	NA	0	True	AATAAA	-20	NA	74696024	74630555	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74632947_74635408_74635627_74640465_74640620_74655732_74656069_74671454_74671775_74674960_74675143_74695879
H1_mix_00028711	chr15	-	3786	8	FSM	ENSG00000179151.13	ENST00000568176.5	1825	8	24	-1985	0	1	multi-exon	FALSE	canonical	3	67	junction_6	109.361411692365	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGCCGTGTGACTTGC	43	False	NA	-1	True	AATAAA	-19	NA	74695976	74630556	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74632947_74635408_74635627_74640465_74640620_74655732_74656069_74671454_74671775_74674960_74675143_74687090_74687180_74695879
H1_mix_00028713	chr15	-	711	5	FSM	ENSG00000179151.13	ENST00000566243.5	711	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	138.966497761151	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCAGCAGCAACAGTGCTCA	12	True	NA	NA	False	NA	NA	NA	74696007	74671544	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74671775_74674960_74675143_74676940_74677023_74687090_74687180_74695879
H1_mix_00028714	chr15	-	1442	3	FSM	ENSG00000140474.14	ENST00000568718.5	707	3	-48	-687	-48	0	multi-exon	FALSE	canonical	3	173	junction_2	18.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCGCGTCTCTTCTTGCC	7072	False	NA	-3	True	ATTAAA	-13	NA	74838004	74836117	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74837245_74837368_74837436_74837756
H1_mix_00028715	chr15	-	2611	16	FSM	ENSG00000140474.14	ENST00000569437.5	2611	16	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_11	22.2854212434946	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCGCGTCTCTTCTTGCC	1883	False	NA	-3	True	ATTAAA	-13	NA	74843193	74836117	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74837245_74837368_74837436_74837756_74837799_74838151_74838193_74838265_74838345_74838439_74838505_74838642_74838746_74839009_74839051_74839267_74839374_74839557_74839714_74840233_74840317_74840497_74840642_74841404_74841510_74842074_74842196_74842279_74842421_74843003
H1_mix_00028716	chr15	-	2545	16	NIC	ENSG00000140474.14	novel	2611	16	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_15	46.0781944090695	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCGCGTCTCTTCTTGCC	20	True	NA	-3	True	ATTAAA	-13	NA	74843130	74836117	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_74837245_74837368_74837436_74837756_74837799_74838151_74838193_74838265_74838345_74838439_74838505_74838642_74838746_74839009_74839051_74839267_74839374_74839557_74839714_74840233_74840317_74840497_74840642_74841404_74841510_74842074_74842196_74842279_74842418_74843003
H1_mix_00028717	chr15	-	2738	15	FSM	ENSG00000140474.14	ENST00000561725.5	2738	15	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_3	14.6531322833818	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCGCGTCTCTTCTTGCC	11	True	NA	-3	True	ATTAAA	-13	NA	74843139	74836117	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74837245_74837368_74837436_74837756_74837799_74838151_74838193_74838265_74838345_74838439_74838505_74838642_74838746_74839009_74839051_74839267_74839374_74839557_74839714_74840233_74840642_74841404_74841510_74842074_74842196_74842279_74842421_74843003
H1_mix_00028718	chr15	-	909	5	FSM	ENSG00000140474.14	ENST00000565011.5	886	5	0	-23	0	0	multi-exon	FALSE	canonical	3	8	junction_4	80.3258986877831	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCGAGGTGTGTCTAGCA	-7	True	NA	NA	False	NA	NA	NA	74842676	74840241	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74840642_74841404_74841510_74842074_74842196_74842279_74842421_74842534
H1_mix_00028719	chr15	-	884	5	FSM	ENSG00000140474.14	ENST00000563301.5	884	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	78.8638066542568	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCGAGGTGTGTCTAGCA	26	True	NA	NA	False	NA	NA	NA	74843124	74840241	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74840642_74841404_74841506_74842074_74842196_74842279_74842421_74843003
H1_mix_00028720	chr15	-	1002	4	FSM	ENSG00000140474.14	ENST00000562395.5	1004	4	2	0	2	0	multi-exon	FALSE	canonical	3	171	junction_3	13.9522996909709	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTGCCTCCAGGTCGTT	1867	False	NA	NA	False	NA	NA	NA	74843209	74840296	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74840642_74841404_74841510_74842074_74842421_74843003
H1_mix_00028724	chr15	-	2456	9	FSM	ENSG00000140497.16	ENST00000268099.13	2453	9	0	-3	0	3	multi-exon	FALSE	canonical	3	456	junction_3	13.4158255429921	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCCACATGTCTGGTGGA	-17	True	NA	-4	True	AATAAA	-19	NA	74873365	74843726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74845218_74845472_74845594_74848599_74848702_74850513_74850674_74851352_74851482_74852068_74852187_74854020_74854120_74854580_74854650_74873198
H1_mix_00028726	chr15	-	865	7	FSM	ENSG00000178761.15	ENST00000563671.5	865	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	67.3434398355838	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGAGCTGTGTCTGTGTTG	18	True	NA	-11	True	AATAAA	-14	NA	74906793	74899991	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74900138_74901949_74902064_74902603_74902787_74904663_74904713_74905153_74905232_74906277_74906366_74906586
H1_mix_00028727	chr15	-	4707	3	FSM	ENSG00000178761.15	ENST00000566894.1	4706	3	0	-1	0	0	multi-exon	FALSE	canonical	0	0	junction_1	92.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGAGCTGTGTCTGTGTTG	15	True	NA	-11	True	AATAAA	-14	NA	74906796	74899991	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74902787_74904663_74906366_74906586
H1_mix_00028728	chr15	-	2721	6	FSM	ENSG00000178761.15	ENST00000563119.5	2721	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	63.6383532156513	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGAGCTGTGTCTGTGTTG	415	False	NA	-11	True	AATAAA	-14	NA	74906837	74899991	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74902064_74902603_74902787_74904663_74904713_74905153_74905232_74906277_74906366_74906586
H1_mix_00028732	chr15	-	1173	5	FSM	ENSG00000178741.12	ENST00000322347.11	1173	5	0	0	0	0	multi-exon	FALSE	canonical	3	3850	junction_2	110.338966371813	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCTTGTCTTAGAAGCG	5	True	NA	38	True	ATTAAA	-18	NA	74938073	74919790	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74920443_74923647_74923771_74926765_74926888_74929115_74929233_74937914
H1_mix_00028733	chr15	-	441	3	FSM	ENSG00000178741.12	ENST00000562233.5	441	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	2038.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTATTTGTTTCATGTG	8	True	NA	-6	True	AATAAA	-24	NA	74938070	74920274	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74920443_74929115_74929233_74937914
H1_mix_00028734	chr15	-	579	4	FSM	ENSG00000178741.12	ENST00000567270.5	579	4	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_3	1672.07263265951	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTATTTGTTTCATGTG	-2	True	NA	-6	True	AATAAA	-24	NA	74938080	74920274	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74920443_74923647_74923771_74926765_74926888_74937914
H1_mix_00028735	chr15	-	576	4	FSM	ENSG00000178741.12	ENST00000568783.5	571	4	0	-5	0	0	multi-exon	FALSE	canonical	3	48	junction_1	1881.93346204258	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTATTTGTTTCATGTG	-5	True	NA	-6	True	AATAAA	-24	NA	74938083	74920274	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74920443_74926765_74926888_74929115_74929233_74937914
H1_mix_00028738	chr15	-	248	1	FSM	ENSG00000203411.3	ENST00000366232.3	298	1	-135	185	-135	-185	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGCCTGGGCGACAGAGT	9254	False	NA	NA	False	NA	NA	NA	75120697	75120449	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_75120400_75120700
H1_mix_00028739	chr15	-	606	1	FSM	ENSG00000259790.1	ENST00000568553.1	737	1	-184	315	0	-315	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCTACATGGATGGCTAT	NA	False	NA	NA	False	NA	NA	NA	75322693	75322087	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_75322100_75322700
H1_mix_00028741	chr15	-	3177	26	FSM	ENSG00000140400.18	ENST00000569482.5	3177	26	0	0	0	0	multi-exon	FALSE	canonical	2	41	junction_3	33.0901798121437	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTCAGTCCCCTT	8	True	NA	-5	True	AATAAA	-16	NA	75368592	75355791	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_75356033_75356109_75356220_75356300_75356381_75356605_75356686_75356792_75356903_75358200_75358345_75358461_75358619_75358703_75358809_75359058_75359154_75359327_75359426_75359619_75359776_75359902_75359989_75360089_75360212_75360564_75360689_75361045_75361192_75361285_75361382_75361603_75361721_75361854_75361948_75362342_75362454_75362641_75362749_75363998_75364189_75364487_75364666_75366521_75366593_75367510_75367635_75368072_75368199_75368482
H1_mix_00028742	chr15	-	3261	26	FSM	ENSG00000140400.18	ENST00000267978.10	3261	26	0	0	0	0	multi-exon	FALSE	canonical	2	119	junction_9	23.1428952380639	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTCAGTCCCCTT	-7	True	NA	-5	True	AATAAA	-16	NA	75368607	75355791	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_75356033_75356109_75356220_75356300_75356450_75356605_75356686_75356792_75356903_75358200_75358345_75358461_75358619_75358703_75358809_75359058_75359154_75359327_75359426_75359619_75359776_75359902_75359989_75360089_75360212_75360564_75360689_75361045_75361192_75361285_75361382_75361603_75361721_75361854_75361948_75362342_75362454_75362641_75362749_75363998_75364189_75364487_75364666_75366521_75366593_75367510_75367635_75368072_75368199_75368482
H1_mix_00028743	chr15	-	848	2	FSM	ENSG00000140400.18	ENST00000566569.1	848	2	0	0	0	0	multi-exon	FALSE	canonical	2	147	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCATCCTGTGAGTGGCG	NA	False	NA	NA	False	NA	NA	NA	75357048	75356119	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_75356220_75356300
H1_mix_00028744	chr15	-	367	3	FSM	ENSG00000140400.18	ENST00000563528.5	367	3	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_2	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGAGGCTGTATGAGGC	NA	False	NA	NA	False	NA	NA	NA	75356819	75356189	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_75356450_75356605_75356686_75356792
H1_mix_00028745	chr15	-	1356	9	FSM	ENSG00000140400.18	ENST00000567163.5	1356	9	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_5	20.481699148264	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGGTGGGACGTGCTGGG	8612	False	NA	NA	False	NA	NA	NA	75359988	75356298	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_75356450_75356605_75356686_75356792_75356903_75358200_75358345_75358461_75358619_75358703_75358809_75359058_75359426_75359619_75359776_75359902
H1_mix_00028748	chr15	-	966	3	FSM	ENSG00000140400.18	ENST00000569176.1	966	3	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	21	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTCGGGGGGTAGGGGGT	8838	False	NA	NA	False	NA	NA	NA	75359762	75358461	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_75358619_75358703_75358809_75359058
H1_mix_00028751	chr15	-	675	3	FSM	ENSG00000140400.18	ENST00000563596.5	675	3	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_2	6	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACGAGCTGAGGGGAAGG	8077	False	NA	NA	False	NA	NA	NA	75360523	75359620	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_75359776_75359902_75359989_75360089
H1_mix_00028755	chr15	-	691	3	FSM	ENSG00000140400.18	ENST00000565652.1	691	3	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_2	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGAAAGAGACCCCCGAAG	12	True	NA	NA	False	NA	NA	NA	75368588	75366541	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_75366593_75367510_75367635_75368072
H1_mix_00028756	chr15	-	6723	21	FSM	ENSG00000169375.16	ENST00000394947.8	6723	21	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_20	40.2807646402101	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGTATTTTTTTTTGT	3	True	NA	-9	True	ATTAAA	-14	NA	75451690	75369378	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_75372210_75375664_75375873_75380628_75380724_75381612_75381706_75384263_75384438_75389651_75389822_75392241_75392816_75394679_75394864_75396257_75396497_75400039_75400157_75400729_75400941_75401851_75401971_75407054_75407145_75409835_75409992_75410133_75410287_75411491_75411744_75412762_75413046_75414204_75414312_75422646_75422824_75430186_75430409_75451422
H1_mix_00028760	chr15	-	4083	3	FSM	ENSG00000169375.16	ENST00000567289.5	4078	3	0	-5	0	5	multi-exon	FALSE	canonical	3	240	junction_2	27	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTCATGATATTTGTATA	-4	True	NA	NA	False	ATTAAA	-25	NA	75451664	75419204	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_75422824_75430186_75430409_75451422
H1_mix_00028762	chr15	-	8436	13	FSM	ENSG00000169410.11	ENST00000618819.5	7839	13	0	-597	0	597	multi-exon	FALSE	canonical	3	186	junction_11	27.5418872910982	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCTCAAATGGCAAGCT	-24	True	NA	NA	False	AATAAA	-11	NA	75579315	75462653	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_75468984_75469791_75470000_75470679_75470831_75473688_75473768_75479847_75479915_75490207_75490302_75505674_75506004_75508916_75509028_75517258_75517365_75523120_75523246_75524208_75524299_75527117_75527262_75578713
H1_mix_00028763	chr15	-	554	3	FSM	ENSG00000169410.11	ENST00000568108.1	561	3	7	0	7	0	multi-exon	FALSE	canonical	3	263	junction_2	21.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATTTTTGCTACAAGGCC	NA	False	NA	NA	False	NA	NA	NA	75470902	75468860	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_75468984_75469791_75470000_75470679
H1_mix_00028765	chr15	-	1425	9	FSM	ENSG00000169371.14	ENST00000308588.10	1420	9	0	-5	0	2	multi-exon	FALSE	canonical	3	140	junction_8	44.5897970392331	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGTGGTTCTTAAGCTT	-10	True	NA	NA	False	AATATA	-22	NA	75625725	75598080	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_75598682_75601137_75601219_75605149_75605228_75607215_75607314_75609557_75609652_75609889_75609995_75617407_75617553_75620893_75621057_75625665
H1_mix_00028767	chr15	-	2376	10	NIC	ENSG00000169371.14	novel	1682	9	NA	NA	-79	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_9	100.394776313866	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATCCACAATGTAAATATA	226	False	NA	NA	False	NA	NA	NA	75626238	75598121	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_75598682_75601137_75601219_75605149_75605228_75607215_75607314_75609557_75609652_75609889_75609995_75617407_75617553_75620893_75621057_75622341_75622491_75625335
H1_mix_00028768	chr15	-	1682	9	FSM	ENSG00000169371.14	ENST00000564675.5	1682	9	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_8	73.6355043440323	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATCCACAATGTAAATATA	22	True	NA	NA	False	NA	NA	NA	75625693	75598121	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_75598682_75601137_75601219_75605149_75605228_75607215_75607314_75609557_75609652_75609889_75609995_75617407_75617553_75620893_75621057_75625335
H1_mix_00028769	chr15	-	759	4	FSM	ENSG00000169371.14	ENST00000568162.5	759	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	115.540276767695	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAGTGGTCCAGAGAAGA	6	True	NA	NA	False	AAAACA	-13	NA	75625638	75617408	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_75617553_75620893_75621057_75622341_75622491_75625335
H1_mix_00028770	chr15	-	1140	1	FSM	ENSG00000177971.9	ENST00000403490.3	1132	1	0	-8	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	192	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTCTGGTTTTCTTTTTT	-14	True	NA	-17	True	AATAAA	-34	NA	75640224	75639084	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_75639100_75640200
H1_mix_00028772	chr15	-	2272	12	FSM	ENSG00000140374.17	ENST00000557943.6	2289	12	3	14	0	-10	multi-exon	TRUE	canonical	3	732	junction_11	104.943274720636	206	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAAGTTGTATCTTTG	26	False	76311492	-13	True	TATAAA	-5	NA	76311466	76215366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_76216598_76225848_76225930_76231332_76231399_76274411_76274495_76283756_76283826_76285636_76285739_76286370_76286482_76287845_76287946_76292430_76292514_76292618_76292701_76295590_76295738_76311349
H1_mix_00028776	chr15	-	2705	1	FSM	ENSG00000259581.3	ENST00000558165.3	2705	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	294	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACAGGCAGAGGGCATCA	NA	False	NA	NA	False	NA	NA	NA	76261690	76258985	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_76259000_76261700
H1_mix_00028777	chr15	-	5028	32	FSM	ENSG00000140386.13	ENST00000563290.6	5033	32	0	5	0	-5	multi-exon	TRUE	canonical	1	10	junction_24	5.82845294084655	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCGCGATGGTTCTGAAT	4	True	NA	NA	False	AATAAA	-12	NA	76905340	76347908	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_76348737_76351236_76351289_76353948_76354141_76376161_76376312_76381377_76381616_76404523_76404680_76434077_76434311_76471211_76471336_76504858_76504975_76574157_76574285_76621763_76621830_76665652_76665790_76701757_76701866_76702849_76703003_76705902_76705985_76728594_76728738_76733228_76733385_76753807_76753949_76764960_76765073_76765336_76765455_76765562_76765639_76766917_76767089_76771741_76771955_76774854_76775118_76795279_76795441_76800247_76800365_76804532_76804634_76841733_76841932_76857808_76857880_76862415_76862534_76883811_76883877_76905298
H1_mix_00028778	chr15	-	6723	7	FSM	ENSG00000140391.15	ENST00000267970.9	6348	7	17	-392	0	392	multi-exon	FALSE	canonical	3	1463	junction_5	92.9272415507004	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCGAGTTGGTGGTTGTT	83	False	NA	NA	False	NA	NA	NA	77071092	77041011	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_77046928_77052384_77052469_77052776_77052930_77054177_77054280_77055788_77055864_77056063_77056256_77070891
H1_mix_00028779	chr15	-	1592	7	FSM	ENSG00000140391.15	ENST00000561277.5	1592	7	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_6	592.531480645168	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAATTCAATAAACTCTGT	9	True	NA	-35	True	AATAGA	-5	NA	77071122	77046059	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_77046928_77052384_77052469_77052776_77052930_77054177_77054280_77055788_77055864_77056063_77056256_77071004
H1_mix_00028780	chr15	-	3482	1	FSM	ENSG00000278991.1	ENST00000624777.1	1514	1	-1668	-300	-1668	300	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAATGAATTCATTGGTG	4597	False	NA	NA	False	NA	NA	NA	77066578	77063096	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_77063100_77066600
H1_mix_00028781	chr15	-	399	1	FSM	ENSG00000269951.1	ENST00000602975.1	672	1	-18	291	-18	-291	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATACAGCCTGCGTTCAAA	2832	False	NA	NA	False	NA	NA	NA	77068343	77067944	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_77067900_77068300
H1_mix_00028782	chr15	-	11558	5	FSM	ENSG00000173517.11	ENST00000312493.5	11512	5	5	-51	5	45	multi-exon	FALSE	canonical	3	12	junction_1	2.6809513236909	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGAGGGTTTGGTTGCAG	NA	False	NA	40	True	AAAACA	-44	NA	77252526	77108112	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_77115320_77133004_77133751_77158502_77158697_77178789_77182041_77252366
H1_mix_00028783	chr15	-	4080	5	FSM	ENSG00000173517.11	ENST00000558305.5	4644	5	0	564	0	-527	multi-exon	FALSE	canonical	3	12	junction_2	7.58287544405155	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTGTTTTTTATGAAG	-13	True	NA	NA	False	AATAAA	-15	NA	77420122	77178382	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_77182041_77252366_77252527_77286422_77286505_77365162_77365226_77420005
H1_mix_00028788	chr15	-	3489	2	FSM	ENSG00000169783.13	ENST00000355300.7	3477	2	0	-12	0	12	multi-exon	TRUE	canonical	3	407	junction_1	0	213	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATTATGGTCATTATTAT	-4	True	NA	-3	True	NA	NA	NA	77632912	77613014	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_77615901_77632309
H1_mix_00028792	chr15	-	4429	1	FSM	ENSG00000167202.12	ENST00000418039.2	4395	1	-6	-28	-6	26	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTGATGGGGCTCACCC	NA	False	NA	16	True	AATAAA	-45	NA	77999387	77994958	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_77995000_77999400
H1_mix_00028793	chr15	-	6126	13	FSM	ENSG00000167202.12	ENST00000300584.8	6126	13	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_6	8.38980863243548	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCATTGAAATTCAGTT	-18	True	NA	-10	True	AATAAA	-19	NA	78077711	77994984	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_77998356_78001618_78001741_78003304_78003491_78008996_78009115_78012822_78013318_78016545_78016740_78017846_78017958_78024155_78024540_78025258_78025498_78030006_78030171_78044899_78045069_78054033_78054188_78077292
H1_mix_00028795	chr15	-	1499	6	FSM	ENSG00000136425.14	ENST00000258930.8	1499	6	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_4	65.3923542931435	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGCTTCTGATCCTTGA	-2	True	NA	17	True	NA	NA	NA	78131445	78104605	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_78105333_78105738_78105935_78109234_78109383_78111164_78111277_78123704_78123740_78131164
H1_mix_00028796	chr15	-	1511	5	FSM	ENSG00000136425.14	ENST00000539011.5	1511	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_4	160.875728436579	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTCTCCATGTATGCTA	-6	True	NA	-26	True	AGTAAA	-16	NA	78131535	78104648	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_78105333_78105738_78105935_78109234_78109383_78111164_78111277_78131164
H1_mix_00028799	chr15	-	6215	14	FSM	ENSG00000103740.10	ENST00000258873.9	6215	14	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	3.93437287770598	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGTCTTCAAGTGCATT	-22	True	NA	NA	False	AAAAAG	-15	NA	78234565	78167467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_78171530_78173592_78173840_78174384_78174525_78178613_78178832_78179549_78179781_78180754_78180937_78181968_78182146_78182465_78182616_78182704_78182786_78193505_78193627_78193931_78194021_78194505_78194727_78208001_78208103_78234370
H1_mix_00028800	chr15	-	3490	1	FSM	ENSG00000140395.9	ENST00000559940.1	3629	1	139	0	139	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGTGTCCTTGAACATG	NA	False	NA	-6	True	CATAAA	-17	NA	78286724	78283234	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_78283200_78286700
H1_mix_00028801	chr15	-	1300	11	FSM	ENSG00000140395.9	ENST00000558311.5	1266	11	-31	-3	0	3	multi-exon	FALSE	canonical	3	37	junction_10	214.57607042725	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTCCTTGAACATGCTT	-1	True	NA	-3	True	CATAAA	-20	NA	78299636	78283231	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_78283522_78285260_78285340_78286040_78286134_78288288_78288383_78289618_78289713_78289950_78290100_78292615_78292789_78293166_78293273_78294945_78294974_78295674_78295794_78299561
H1_mix_00028802	chr15	-	1202	11	FSM	ENSG00000140395.9	ENST00000267973.7	1202	11	0	0	0	0	multi-exon	FALSE	canonical	3	565	junction_10	64.7580882979107	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGTGTCCTTGAACATG	-3	True	NA	-6	True	CATAAA	-17	NA	78299609	78283234	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_78283522_78285260_78285340_78286040_78286134_78288288_78288383_78289618_78289713_78289950_78290100_78292615_78292789_78293166_78293273_78294945_78294974_78295674_78295726_78299561
H1_mix_00028803	chr15	-	695	1	FSM	ENSG00000259562.2	ENST00000560331.2	695	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCGTGGAGAAGTAAGGAA	8514	False	NA	NA	False	AAAAAG	-19	NA	78291221	78290526	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_78290500_78291200
H1_mix_00028807	chr15	-	5527	24	FSM	ENSG00000136378.15	ENST00000388820.5	5520	24	0	-7	0	7	multi-exon	FALSE	canonical	3	71	junction_17	28.1134617163849	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTCGTCTTGGATTTG	18	False	78811482	-3	True	CATAAA	-28	NA	78811464	78759198	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_78759579_78762402_78762566_78763698_78763846_78763925_78764100_78764554_78764708_78765644_78767052_78767378_78767593_78768132_78768260_78771161_78771304_78771584_78771830_78773082_78773204_78774166_78774301_78774623_78774794_78776187_78776334_78776748_78776842_78777443_78777589_78788230_78788375_78789688_78789839_78790669_78790795_78791139_78791224_78796589_78796787_78797947_78798114_78800191_78800548_78811120
H1_mix_00028811	chr15	-	1881	12	FSM	ENSG00000103811.18	ENST00000678886.1	1881	12	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_11	49.2190247434284	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTGTGTGGCCTCCCCA	6	False	NA	NA	False	NA	NA	NA	78945094	78921482	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_78922206_78922992_78923119_78925333_78925441_78927712_78927782_78929411_78929494_78931450_78931507_78932371_78932459_78934977_78935083_78935679_78935751_78937317_78937424_78939139_78939172_78944777
H1_mix_00028813	chr15	-	881	3	FSM	ENSG00000136371.11	ENST00000559722.2	948	3	67	0	67	0	multi-exon	FALSE	canonical	3	10	junction_2	417	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGGTGTTAATGTGAC	2838	False	NA	-1	True	ATTAAA	-34	NA	79897312	79844975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_79845443_79889092_79889355_79897160
H1_mix_00028814	chr15	-	953	3	NIC	ENSG00000136371.11	novel	2301	3	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	239	junction_2	302.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGGTGTTAATGTGAC	-9	True	NA	-1	True	ATTAAA	-34	NA	79897014	79844975	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_79845443_79889092_79889355_79896790
H1_mix_00028816	chr15	-	692	2	FSM	ENSG00000180953.11	ENST00000562759.1	694	2	0	2	0	-2	multi-exon	FALSE	canonical	3	438	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCATTTTTGTCTTCAG	7101	False	NA	-4	True	AATAAA	-20	NA	79908036	79898841	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_79899126_79907628
H1_mix_00028817	chr15	-	529	3	FSM	ENSG00000180953.11	ENST00000485386.1	529	3	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_2	87	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCCAGAGTTACAGAAAT	10	True	NA	-28	True	AATAAA	-23	NA	79923702	79898903	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_79899126_79907628_79907685_79923451
H1_mix_00028820	chr15	-	1014	5	FSM	ENSG00000259495.3	ENST00000656160.1	998	5	0	-16	0	0	multi-exon	FALSE	canonical	3	12	junction_2	8.04285397107271	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTAAGAGGCCTGAGAGA	746	False	NA	-7	True	AATAAA	-25	NA	80404214	80344852	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_80345128_80347698_80347785_80397943_80398007_80403501_80403586_80403708
H1_mix_00028823	chr15	-	2928	4	NNC	ENSG00000259692.6	novel	747	4	NA	NA	132944	-12532	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	20.9814733091416	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGGTGTACCACAGCCAGT	NA	False	NA	NA	False	AAAACA	-38	NA	81665126	81645957	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_81646021_81660013_81660711_81661999_81662139_81663097
H1_mix_00028832	chr15	-	502	5	FSM	ENSG00000182774.13	ENST00000647841.1	488	5	0	-14	0	14	multi-exon	FALSE	canonical	3	8528	junction_4	1585.89036506311	3051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTTGTGTGTGGGTAGA	-2	True	NA	-2	True	AATAAA	-32	NA	82540457	82536735	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_82536882_82538305_82538372_82538879_82538986_82539980_82540133_82540425
H1_mix_00028833	chr15	-	1909	4	FSM	ENSG00000182774.13	ENST00000561157.5	1909	4	0	0	0	0	multi-exon	FALSE	canonical	3	8528	junction_3	1802.5173138327	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGCCTGTGTCATCTTT	-4	True	NA	-21	True	AATAAA	-13	NA	82540459	82536754	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_82538372_82538879_82538986_82539980_82540133_82540425
H1_mix_00028834	chr15	-	953	4	FSM	ENSG00000182774.13	ENST00000560639.1	932	4	0	-21	0	21	multi-exon	FALSE	canonical	3	8528	junction_3	1521.97072537184	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGTATTATTTTCAATAA	3	True	NA	-54	True	NA	NA	NA	82540452	82536787	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_82536882_82538305_82538986_82539980_82540133_82540425
H1_mix_00028835	chr15	-	1803	13	FSM	ENSG00000260836.2	ENST00000562833.2	2012	13	209	0	209	0	multi-exon	FALSE	canonical	2	10	junction_8	5225.28123844385	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGTATTATTTTCAATAA	1666	False	NA	-54	True	NA	NA	NA	82571532	82536787	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_82536882_82538305_82538372_82538879_82538986_82539980_82540133_82546440_82546522_82547142_82547238_82549459_82549659_82552479_82552617_82553466_82553557_82553877_82553992_82555869_82556123_82557759_82557987_82571343
H1_mix_00028836	chr15	-	760	2	FSM	ENSG00000182774.13	ENST00000559776.1	760	2	0	0	0	0	multi-exon	FALSE	canonical	3	11835	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGATTTGATGACTGCT	72	False	NA	NA	False	NA	NA	NA	82540419	82538664	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_82538986_82539980
H1_mix_00028843	chr15	-	4182	4	FSM	ENSG00000103723.17	ENST00000535513.2	3395	4	76	-863	0	40	multi-exon	FALSE	canonical	3	35	junction_1	0.471404520791032	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCTCTTCATTCCCTGA	-4	True	NA	4	True	AATAAA	-41	NA	82709843	82685050	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_82688832_82689157_82689233_82689377_82689454_82709593
H1_mix_00028848	chr15	-	2077	10	NNC	ENSG00000103942.13	novel	1949	9	NA	NA	-190	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	58.2790223360382	20	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATGTGTACACAGAATTT	NA	False	NA	-15	True	AATAAA	-13	NA	82952918	82848986	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_82849904_82851150_82851232_82852141_82852253_82854643_82854801_82859028_82859136_82864166_82864260_82875272_82875405_82892684_82892842_82952530_82952726_82952791
H1_mix_00028851	chr15	-	631	4	FSM	ENSG00000169609.14	ENST00000508990.2	631	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	74.8880646179498	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAATCATGACTTGTA	23	True	NA	NA	False	AAAAAG	-3	NA	83011585	83004685	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_83004973_83008547_83008676_83010236_83010364_83011496
H1_mix_00028857	chr15	-	12538	6	FSM	ENSG00000166503.9	ENST00000299633.7	12538	6	0	0	0	0	multi-exon	FALSE	canonical	3	527	junction_5	34.6156034181119	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGGTGTGTAACCTTGG	18	True	NA	NA	False	AATAAA	-15	NA	83207823	83127752	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_83139276_83151214_83151362_83157414_83157574_83157902_83158042_83163998_83164076_83207330
H1_mix_00028861	chr15	-	5099	7	NIC	ENSG00000225151.10	novel	2850	7	NA	NA	3	502	intron_retention	FALSE	canonical	3	81	junction_3	9.95685135416256	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTCCCTACCCAGTTCA	34	False	NA	1	True	NA	NA	NA	84230122	84198808	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_84203021_84204176_84204332_84204425_84204517_84204599_84204692_84204786_84204976_84205230_84205320_84229851
H1_mix_00028862	chr15	-	4253	5	FSM	ENSG00000225151.10	ENST00000559668.5	4253	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	38.0353454039792	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGTCTACTCAGTTTTT	134	False	NA	NA	False	NA	NA	NA	84230022	84199310	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_84203021_84204425_84204517_84204599_84204692_84204786_84204976_84229851
H1_mix_00028863	chr15	-	2568	8	NIC	ENSG00000225151.10	novel	2850	7	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	16.1321076725635	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGTCTACTCAGTTTTT	70	False	NA	NA	False	NA	NA	NA	84230086	84199310	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_84200877_84202869_84203021_84204176_84204332_84204425_84204517_84204599_84204692_84204786_84204976_84205230_84205320_84229851
H1_mix_00028865	chr15	-	1890	8	FSM	ENSG00000177082.13	ENST00000398528.7	1915	8	25	0	-20	0	multi-exon	TRUE	canonical	3	43	junction_7	28.6975786506138	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTGGGCATGGTGGCT	4288	False	NA	NA	False	NA	NA	NA	84654318	84642767	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_84643724_84645470_84645837_84646183_84646349_84647889_84647955_84648536_84648626_84652713_84652803_84653631_84653700_84654226
H1_mix_00028867	chr15	-	2154	3	FSM	ENSG00000177082.13	ENST00000558608.1	2154	3	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	3.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTTTGTGAATTTTTTT	9789	False	NA	-11	True	TATAAA	-1	NA	84648586	84643144	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_84643724_84645470_84646349_84647889
H1_mix_00028868	chr15	-	1572	9	NIC	ENSG00000177082.13	novel	2063	8	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_2	38.9163766941374	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTTTGTGAATTTTTTT	4342	False	NA	-11	True	TATAAA	-1	NA	84654264	84643144	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_84643724_84645470_84645837_84645972_84646086_84646183_84646349_84647889_84647955_84648536_84648626_84652713_84652803_84653631_84653700_84654226
H1_mix_00028870	chr15	-	663	3	FSM	ENSG00000197696.10	ENST00000360476.8	655	3	0	-8	0	5	multi-exon	FALSE	canonical	3	174	junction_2	0.5	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCTCTCCTTTCACCCGT	1	True	NA	4	True	AATAAA	-26	NA	84658199	84655123	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_84655410_84657175_84657349_84657995
H1_mix_00028872	chr15	-	1262	5	FSM	ENSG00000140612.14	ENST00000559729.5	1256	5	0	-6	0	6	multi-exon	FALSE	canonical	3	13	junction_3	523.305121320249	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGTGTTTGTCGGGAAA	-28	True	NA	0	True	AATAAA	-30	NA	84716460	84669531	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_84670070_84670724_84670783_84680712_84680833_84691534_84691645_84716024
H1_mix_00028874	chr15	-	1089	7	FSM	ENSG00000140612.14	ENST00000560266.5	1089	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	557.049194915095	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTATCCCTGAATTGTG	-1	True	NA	-12	True	AATAAA	-18	NA	84716111	84669543	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_84670070_84670724_84670783_84679931_84679970_84680712_84680833_84687624_84687775_84691534_84691645_84716024
H1_mix_00028875	chr15	-	1079	6	FSM	ENSG00000140612.14	ENST00000268220.12	1079	6	0	0	0	0	multi-exon	FALSE	canonical	3	1180	junction_3	28.4042250378355	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTATCCCTGAATTGTG	-2	True	NA	-12	True	AATAAA	-18	NA	84716139	84669543	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_84670070_84670724_84670783_84680712_84680833_84687624_84687775_84691534_84691645_84716024
H1_mix_00028876	chr15	-	882	5	FSM	ENSG00000140612.14	ENST00000558217.5	882	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	512.05590515099	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTTATCCCTGAATTGT	0	True	NA	-13	True	AATAAA	-17	NA	84716063	84669544	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_84670070_84670724_84670783_84687624_84687775_84691534_84691645_84716024
H1_mix_00028878	chr15	-	5343	1	FSM	ENSG00000183655.13	ENST00000536947.2	5143	1	-201	1	-201	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAATTCTTTGCCTGCCTT	NA	False	NA	-10	True	AATAAA	-10	NA	85764673	85759330	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_85759300_85764700
H1_mix_00028884	chr15	-	3505	6	FSM	ENSG00000140511.12	ENST00000558770.5	3071	6	-421	-13	-355	12	multi-exon	FALSE	canonical	3	13	junction_3	120.867530793013	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGTCTCCATCTCGTT	6285	False	NA	7	True	AATAAA	-37	NA	88895952	88877281	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_88878257_88878966_88879270_88879417_88880611_88881356_88881726_88887174_88887346_88895458
H1_mix_00028885	chr15	-	807	3	FSM	ENSG00000140511.12	ENST00000563808.1	807	3	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_2	30.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACGACAGAGCTGGGGTC	22	True	NA	NA	False	NA	NA	NA	88895513	88881144	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_88881726_88887174_88887346_88895458
H1_mix_00028887	chr15	-	1994	9	FSM	ENSG00000140545.15	ENST00000558018.5	1989	9	0	-5	0	5	multi-exon	FALSE	canonical	3	19	junction_8	1040.24849795614	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGGTTCGTTATTGTTT	0	True	NA	0	True	AATATA	-25	NA	88913379	88898677	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_88899533_88899655_88899812_88901550_88901736_88905756_88905902_88906625_88906779_88907194_88907377_88909791_88909924_88912123_88912177_88913246
H1_mix_00028893	chr15	-	4668	24	FSM	ENSG00000140521.17	ENST00000631044.2	4668	24	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_11	96.6868349123531	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGCCTTTGTTAGTCAT	11	True	NA	-2	True	AATAAA	-31	NA	89334817	89316304	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_89316828_89317375_89317537_89318540_89318750_89318930_89319100_89319227_89319351_89320765_89321013_89321124_89321261_89321735_89321854_89321961_89322016_89322741_89322903_89323403_89323553_89323814_89323902_89324106_89324228_89325449_89325687_89326611_89326739_89326911_89327064_89327166_89327350_89328455_89328536_89328684_89328832_89328942_89329111_89330080_89330277_89332217_89332375_89333095_89333914_89334672
H1_mix_00028895	chr15	-	4497	23	FSM	ENSG00000140521.17	ENST00000442287.6	4487	23	5	-15	5	0	multi-exon	FALSE	canonical	3	181	junction_22	35.4836710204977	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGCCTTTGTTAGTCAT	-28	True	NA	-2	True	AATAAA	-31	NA	89334856	89316304	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_89316828_89317375_89317537_89318540_89318750_89318930_89319100_89319227_89319351_89320765_89321013_89321124_89321261_89321735_89321854_89321961_89322016_89322741_89322903_89323403_89323512_89323814_89323902_89324106_89324228_89325449_89325687_89326611_89326739_89326911_89327064_89327166_89327350_89328455_89328536_89328684_89328832_89328942_89329111_89330080_89330277_89333095_89333914_89334684
H1_mix_00028897	chr15	-	5318	22	FSM	ENSG00000140521.17	ENST00000672071.1	5318	22	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_21	52.3405905102912	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCAAGGCAGTGGAAATAAA	117	False	NA	-52	True	GATAAA	-6	NA	89334711	89316354	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_89316828_89317375_89318750_89318930_89319100_89319227_89319351_89320765_89321013_89321124_89321261_89321735_89321854_89321961_89322016_89322741_89322903_89323403_89323512_89323814_89323902_89324106_89324228_89325449_89325687_89326611_89326739_89326911_89327064_89327166_89327350_89328455_89328536_89328684_89328832_89328942_89329111_89330080_89330277_89333095_89333914_89334672
H1_mix_00028898	chr15	-	4902	23	FSM	ENSG00000140521.17	ENST00000530292.3	3843	23	-1462	403	0	-47	multi-exon	FALSE	canonical	3	22	junction_3	72.2225097119375	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTCCCGTGGAGCTTCA	11	True	NA	NA	False	NA	NA	NA	89334817	89316730	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_89316828_89317375_89317537_89317938_89318038_89318540_89318750_89318930_89319100_89319227_89319351_89320765_89321013_89321124_89321261_89321735_89321854_89321961_89322016_89322741_89322903_89323403_89323512_89323814_89323902_89324106_89324228_89325449_89325687_89326611_89326739_89326911_89327064_89327166_89327350_89328455_89328536_89328684_89328832_89328942_89329111_89330080_89330277_89333095
H1_mix_00028900	chr15	-	305	2	FSM	ENSG00000140519.14	ENST00000559638.1	591	2	248	38	-58	-38	multi-exon	FALSE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGCCCCAGGCAAGGG	7476	False	NA	NA	False	NA	NA	NA	89479488	89477836	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_89477975_89479321
H1_mix_00028902	chr15	-	4879	19	NNC	ENSG00000166813.16	novel	4567	19	NA	NA	62	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_18	33.0271586709566	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGTATATAGGGGAAACT	9723	False	NA	-89	True	TTTAAA	-6	NA	89655389	89628050	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_89628787_89628975_89629123_89629374_89629574_89630286_89630494_89631494_89631711_89632819_89632997_89633140_89633267_89633685_89633884_89642202_89642406_89645012_89645163_89645335_89645452_89645892_89646024_89646829_89647058_89647595_89647713_89648254_89648775_89648973_89649368_89649740_89649942_89652602_89652955_89654928
H1_mix_00028904	chr15	-	2709	3	FSM	ENSG00000166821.9	ENST00000300056.8	2708	3	0	-1	0	1	multi-exon	FALSE	canonical	3	7	junction_1	2.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGTGTCTGTGAGTGT	26	False	89690780	-2	True	AATAAA	-15	NA	89690754	89681533	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_89683949_89686430_89686547_89690576
H1_mix_00028905	chr15	-	905	2	FSM	ENSG00000166821.9	ENST00000559170.1	905	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGATGTGGGCAGAGATG	-3	True	NA	NA	False	NA	NA	NA	89690783	89683250	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_89683949_89690576
H1_mix_00028907	chr15	-	5548	6	FSM	ENSG00000157823.17	ENST00000336418.9	5543	6	0	-5	0	5	multi-exon	FALSE	canonical	3	462	junction_2	17.2557236880984	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCAAATGGCAGTTCATT	2	True	NA	-12	True	AATAAA	-25	NA	89893994	89830593	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_89835644_89837614_89837723_89871474_89871547_89888520_89888633_89889048_89889141_89893880
H1_mix_00028908	chr15	-	6148	10	FSM	ENSG00000250021.7	ENST00000398333.7	2439	10	0	-3709	0	3709	multi-exon	FALSE	canonical	3	7	junction_5	230.409994210535	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGTTGAGGCAAATGGCAGT	63	False	NA	-17	True	AATAAA	-20	NA	89912882	89830598	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_89835644_89837614_89837723_89871474_89871547_89888520_89888633_89889048_89889141_89903215_89903380_89903776_89903984_89908279_89908413_89910743_89910820_89912743
H1_mix_00028911	chr15	-	7581	6	FSM	ENSG00000242498.8	ENST00000357484.10	7587	6	6	0	6	0	multi-exon	FALSE	canonical	3	14	junction_1	2.87054001888146	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTGAGTCTAATGTTTTAT	-1	True	NA	NA	False	CATAAA	-16	NA	89912946	89895005	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_89901804_89903215_89903380_89903776_89903984_89908279_89908413_89910743_89910820_89912743
H1_mix_00028912	chr15	-	2291	1	FSM	ENSG00000259291.2	ENST00000620791.1	2133	1	-185	27	-185	-24	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATGTTAGTTATGATT	NA	False	NA	NA	False	AATAAA	-24	NA	90076829	90074538	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_90074500_90076800
H1_mix_00028913	chr15	-	2659	11	FSM	ENSG00000182054.10	ENST00000330062.8	2658	11	0	-1	0	1	multi-exon	FALSE	canonical	3	355	junction_3	49.4716080191457	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTCCTCTGCATAGTAA	16	True	NA	-15	True	AATAAA	-31	NA	90102468	90083043	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_90084354_90084815_90084909_90085000_90085099_90085274_90085388_90087111_90087264_90087438_90087576_90088358_90088503_90088586_90088748_90090478_90090645_90091552_90091645_90102275
H1_mix_00028914	chr15	-	1449	9	FSM	ENSG00000182054.10	ENST00000560061.1	1449	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_8	157.169444788101	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGCTCTTCACAAAATT	16	True	NA	-21	True	NA	NA	NA	90102468	90083995	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_90084354_90084815_90084909_90085000_90085099_90085274_90085388_90087111_90087264_90087438_90087576_90088358_90088503_90088586_90088748_90102275
H1_mix_00028915	chr15	-	1166	7	FSM	ENSG00000185043.12	ENST00000328649.11	1141	7	-106	81	0	-81	multi-exon	FALSE	canonical	3	459	junction_2	37.446257786623	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGGGGTGGTGGTTAGA	10	True	NA	-83	True	NA	NA	NA	90234047	90230055	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_90230506_90230933_90231023_90231094_90231214_90231356_90231508_90232218_90232328_90233668_90233704_90233834
H1_mix_00028916	chr15	-	1096	7	FSM	ENSG00000185043.12	ENST00000612800.1	1096	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	194.820786593446	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGTGACATGAGATACAC	10	True	NA	-14	True	AATAAA	-20	NA	90234047	90230245	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_90230506_90230933_90231023_90231094_90231214_90231356_90231508_90232218_90232448_90233668_90233704_90233834
H1_mix_00028917	chr15	-	4426	3	FSM	ENSG00000184508.12	ENST00000643068.1	4477	3	51	0	-15	0	multi-exon	FALSE	canonical	3	149	junction_1	9.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGACCCCAGCAGCAACA	16	True	NA	NA	False	NA	NA	NA	90935145	90930311	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_90931406_90931703_90931945_90932054
H1_mix_00028919	chr15	-	1054	4	FSM	ENSG00000184508.12	ENST00000330334.7	1047	4	0	-7	0	0	multi-exon	FALSE	canonical	2	7	junction_1	72.0293150198044	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCTGCTCCTTCTCC	-2	True	NA	-1	True	AATAAA	-24	NA	90932546	90930917	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_90931557_90931703_90931945_90932054_90932111_90932428
H1_mix_00028923	chr15	-	3072	15	FSM	ENSG00000198901.14	ENST00000394249.8	3072	15	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	97.9025963258735	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATAGTGTGGTGTTTCCT	-2	True	NA	-3	True	AATAAA	-30	NA	90994535	90966039	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_90967203_90969078_90969121_90969446_90969624_90970403_90970515_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981498_90981670_90981747_90981982_90984017_90984141_90984692_90984826_90994406
H1_mix_00028924	chr15	-	2440	14	NIC	ENSG00000198901.14	novel	3072	15	NA	NA	31	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_1	65.1276398118005	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATAGTGTGGTGTTTCCT	79	False	90994586	-3	True	AATAAA	-30	NA	90994571	90966039	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_90966654_90969523_90969624_90970403_90970515_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981498_90981670_90981747_90981982_90984017_90984141_90984692_90984826_90994406
H1_mix_00028926	chr15	-	2917	14	NIC	ENSG00000198901.14	novel	3072	15	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	64.674881033415	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATAGTGTGGTGTTTCCT	34	True	NA	-3	True	AATAAA	-30	NA	90994499	90966039	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_90967203_90969523_90969624_90970403_90970515_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981498_90981670_90981747_90981982_90984017_90984141_90984692_90984826_90994406
H1_mix_00028927	chr15	-	4040	14	FSM	ENSG00000198901.14	ENST00000361188.9	4087	14	47	0	47	0	multi-exon	FALSE	canonical	3	62	junction_1	69.0223358068726	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATTAAAATCTGTA	NA	False	NA	-40	True	AATATA	-13	NA	90995582	90966076	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_90967203_90969446_90969624_90970403_90970515_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981498_90981670_90981747_90981982_90984017_90984141_90984692_90984826_90994406
H1_mix_00028934	chr15	-	698	1	FSM	ENSG00000258741.5	ENST00000685273.1	631	1	-67	0	-67	0	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAACATATAATTAGCTCC	NA	False	NA	NA	False	AATAAA	-16	NA	92734286	92733588	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_92733600_92734300
H1_mix_00028937	chr15	-	3038	3	FSM	ENSG00000182175.15	ENST00000542321.6	3038	3	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	1.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTTAGACGTGTTGG	-10	True	NA	-12	True	AGTAAA	-18	NA	93073148	93043415	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_93045706_93051992_93052508_93072915
H1_mix_00028941	chr15	-	3411	12	NIC	ENSG00000103852.13	novel	3872	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_11	18.7590198690198	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTCCTTTCTGTACTTC	-2	True	NA	-4	True	AATAAA	-18	NA	99249581	99136322	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_99138128_99139316_99139400_99156147_99156298_99161739_99161868_99175049_99175156_99199918_99200097_99218587_99218714_99218897_99219049_99221740_99221865_99228532_99228733_99241364_99241560_99249416
H1_mix_00028942	chr15	-	2987	11	NIC	ENSG00000103852.13	novel	3872	14	NA	NA	0	-146	combination_of_known_junctions	FALSE	canonical	3	14	junction_10	17.9022344974028	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTCTCTCCACCATGTGA	-2	True	NA	NA	False	NA	NA	NA	99249581	99136551	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_99138128_99139316_99139400_99156147_99156298_99161739_99161868_99175049_99175156_99199918_99200097_99218587_99218714_99218897_99219049_99221740_99221865_99228532_99228733_99249416
H1_mix_00028944	chr15	-	901	3	NNC	ENSG00000183060.16	novel	2710	3	NA	NA	0	-4783	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	6.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTGAAACTTGTGTATT	43	False	NA	-18	True	AATAAA	-21	NA	99733361	99720485	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_99720967_99729328_99729732_99733344
H1_mix_00028946	chr15	-	2731	3	FSM	ENSG00000183060.16	ENST00000684762.1	2710	3	26	-47	10	43	multi-exon	FALSE	canonical	3	45	junction_2	11	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCCCAGGCTGGAGTGC	-7	True	NA	36	True	NA	NA	NA	99733411	99727357	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_99729732_99731717_99732008_99733344
H1_mix_00028947	chr15	-	4094	3	ISM	ENSG00000183060.16	ENST00000332728.8	2847	5	33	-43	10	43	intron_retention	FALSE	canonical	3	18	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCCCAGGCTGGAGTGC	-7	True	NA	36	True	NA	NA	NA	99733411	99727357	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_99729732_99731172_99731199_99731717
H1_mix_00028948	chr15	-	880	3	FSM	ENSG00000183060.16	ENST00000493256.1	880	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGATTGTGGCATTCAGT	43	False	NA	NA	False	NA	NA	NA	99733361	99729381	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_99729732_99731554_99732008_99733284
H1_mix_00028953	chr15	-	634	2	Fusion	ENSG00000259376.1_ENSG00000259755.1	novel	491	2	NA	NA	-1304	1574	multi-exon	FALSE	canonical	3	22	junction_1	0	60	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTGGGCTGACTTTAGG	8190	False	NA	0	True	ATTAAA	-30	NA	101050760	101049157	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr15_-_101049665_101050633
H1_mix_00028955	chr15	-	4662	3	FSM	ENSG00000131873.7	ENST00000254190.4	4662	3	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_1	26.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATAAAGTTTTTCAAGTT	-1	True	NA	-19	True	AGTAAA	-15	NA	101252048	101175726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_101178981_101235081_101235578_101251136
H1_mix_00028957	chr15	-	1439	7	FSM	ENSG00000131871.15	ENST00000398226.7	1439	7	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	344.908079541975	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGTGGCAGGAGTGTCCA	8	True	NA	NA	False	NA	NA	NA	101277450	101270816	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_101271646_101272763_101272857_101274419_101274496_101274591_101274682_101275254_101275362_101276540_101276676_101277341
H1_mix_00028958	chr15	-	2320	6	FSM	ENSG00000131871.15	ENST00000526049.6	1218	6	44	-1146	0	-228	multi-exon	FALSE	canonical	3	776	junction_3	89.0721056223552	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAACGACAAAAAGTAGAGG	17	True	NA	-41	True	TATAAA	-7	NA	101277441	101271044	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_101272857_101274419_101274496_101274591_101274682_101275254_101275362_101276540_101276676_101277341
H1_mix_00028961	chr15	-	929	8	FSM	ENSG00000131876.18	ENST00000559309.5	924	8	0	-5	0	1	multi-exon	FALSE	canonical	3	52	junction_3	980.736437165293	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGTCATCATGGTGCA	87	False	NA	-8	True	AATAAA	-23	NA	101295204	101281508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_101281783_101284966_101285061_101285725_101285802_101286907_101287011_101287655_101287703_101291961_101292041_101293024_101293173_101295096
H1_mix_00028969	chr15	-	3657	1	FSM	ENSG00000184277.13	ENST00000619579.1	3534	1	-158	35	-158	-35	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGAAGGTTAACATTTTTC	62	False	NA	2	True	AATAAA	-17	NA	101625135	101621478	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_101621500_101625100
H1_mix_00028970	chr15	-	1267	5	FSM	ENSG00000184277.13	ENST00000428002.6	1267	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	109.964767084735	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATATGCTGTCATTTGA	3	True	NA	NA	False	NA	NA	NA	101652376	101632976	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_101633729_101645086_101645163_101646724_101646900_101650003_101650162_101652270
H1_mix_00028971	chr15	-	1398	6	FSM	ENSG00000184277.13	ENST00000333202.8	1395	6	0	-3	0	1	multi-exon	FALSE	canonical	3	78	junction_5	94.3029161797237	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGGCCTGTTTTCTATAT	-2	True	NA	66	True	AATAAA	-20	NA	101652381	101641844	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_101642645_101645086_101645163_101646724_101646900_101650003_101650162_101651695_101651774_101652270
H1_mix_00028972	chr15	-	1329	5	FSM	ENSG00000184277.13	ENST00000347970.7	1329	5	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_4	37.3162163140906	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGGCCTGTTTTCTATA	-12	True	NA	65	True	AATAAA	-19	NA	101652391	101641845	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_101642645_101645086_101645163_101646724_101646900_101650003_101650162_101652270
H1_mix_00028975	chr15	-	3486	19	FSM	ENSG00000185418.16	ENST00000335968.8	3481	19	0	-5	0	5	multi-exon	FALSE	canonical	3	67	junction_16	10	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTAGTATAAGGTGCAGAT	-18	True	NA	NA	False	AATATA	-14	NA	101724473	101653590	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_101654731_101656921_101657037_101657784_101657858_101661711_101661817_101671485_101671587_101671670_101671749_101675599_101675738_101684074_101684238_101685895_101686063_101701085_101701185_101702238_101702386_101703858_101703938_101705682_101705748_101708792_101708911_101711879_101712002_101714839_101714964_101721125_101721323_101723092_101723165_101724090
H1_mix_00028976	chr15	-	943	2	FSM	ENSG00000259658.5	ENST00000560292.2	625	2	-318	0	-318	0	multi-exon	FALSE	canonical	3	12	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTTCAAATCTTATTTAC	NA	False	NA	NA	False	ATTAAA	-16	NA	101745122	101737108	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_101737370_101744440
H1_mix_00028978	chr15	+	204	1	Intergenic	novelGene_463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	173	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCCCAGCCACCTCCTC	411	False	NA	NA	False	GGGGCT	-38	NA	34496089	34496293	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_34496100_34496300
H1_mix_00028979	chr15	+	215	1	Intergenic	novelGene_464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35047044	35047259	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_35047000_35047300
H1_mix_00028980	chr15	+	659	1	Intergenic	novelGene_467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATACAGGAGCTCAAATG	NA	False	NA	NA	False	AATAAA	-9	NA	36286052	36286711	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_36286100_36286700
H1_mix_00028981	chr15	+	678	1	Intergenic	novelGene_468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTAGTTAAAGTGTCTCA	NA	False	NA	NA	False	NA	NA	NA	36287910	36288588	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_36287900_36288600
H1_mix_00028982	chr15	+	241	1	Intergenic	novelGene_471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGATGGACTTACCTTCCA	NA	False	NA	NA	False	NA	NA	NA	37239127	37239368	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_37239100_37239400
H1_mix_00028983	chr15	+	833	1	Intergenic	novelGene_477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	42993554	42994387	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_42993600_42994400
H1_mix_00028984	chr15	+	294	1	Intergenic	novelGene_479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTATGTTACATACATAGAC	NA	False	NA	41	True	NA	NA	NA	50411237	50411531	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_50411200_50411500
H1_mix_00028985	chr15	+	325	1	Intergenic	novelGene_480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAGGTAACCCAGAGCCT	NA	False	NA	NA	False	NA	NA	NA	50677435	50677760	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_50677400_50677800
H1_mix_00028986	chr15	+	5084	1	Intergenic	novelGene_482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTGACAGAGTGAGACTCT	NA	False	NA	NA	False	NA	NA	NA	52749898	52754982	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_52749900_52755000
H1_mix_00028987	chr15	+	5272	1	Intergenic	novelGene_483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	297	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGCCGTTTTATAGGATT	NA	False	NA	NA	False	NA	NA	NA	53426879	53432151	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_53426900_53432200
H1_mix_00028988	chr15	+	2297	1	Intergenic	novelGene_484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGATGACGCTCATGAGA	NA	False	NA	NA	False	NA	NA	NA	56663424	56665721	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_56663400_56665700
H1_mix_00028989	chr15	+	533	1	Intergenic	novelGene_486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGCTTGTAGGGTTTC	5139	False	NA	NA	False	NA	NA	NA	57269359	57269892	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_57269400_57269900
H1_mix_00028990	chr15	+	948	1	Intergenic	novelGene_487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGTCTCAAAAAAAAAAAAAA	1372	False	NA	NA	False	NA	NA	NA	63670249	63671197	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_63670200_63671200
H1_mix_00028991	chr15	+	608	1	Intergenic	novelGene_488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACCAAACCAAGCAGCTT	6209	False	NA	NA	False	NA	NA	NA	64599167	64599775	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_64599200_64599800
H1_mix_00028993	chr15	+	662	1	Intergenic	novelGene_491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTAGCAGTCACTCCCTGT	NA	False	NA	NA	False	AAAAAG	-13	NA	75887566	75888228	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_75887600_75888200
H1_mix_00028994	chr15	+	901	1	Intergenic	novelGene_492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCGGGTGCTGCCTGTA	NA	False	NA	NA	False	NA	NA	NA	78755178	78756079	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_78755200_78756100
H1_mix_00028995	chr15	+	214	1	Intergenic	novelGene_493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCATATGCGTCAGGTAT	NA	False	NA	NA	False	NA	NA	NA	88549035	88549249	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_88549000_88549200
H1_mix_00028999	chr15	+	1051	1	FSM	ENSG00000273679.1	ENST00000616872.1	1835	1	134	650	134	-650	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTACCACCTGCTGGAGTT	327	False	NA	NA	False	AAAACA	-30	NA	22371869	22372920	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_22371900_22372900
H1_mix_00029000	chr15	+	6044	35	NNC	ENSG00000276550.5	novel	5746	32	NA	NA	-718	0	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_21	202.79443970456	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATTACACCCATTATTT	NA	False	NA	NA	False	AATAAA	-20	NA	22494851	22590815	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_22494956_22495569_22495673_22516875_22516991_22534067_22534244_22537437_22537609_22537992_22538097_22539096_22539248_22541994_22542210_22542482_22542616_22542722_22542851_22542942_22543139_22545766_22545901_22546429_22546601_22546677_22546821_22546937_22547090_22547880_22548073_22554384_22554573_22556011_22556205_22556909_22557093_22559788_22559971_22560787_22560936_22561257_22561455_22561558_22561790_22562948_22563088_22564388_22564533_22566304_22566363_22569148_22569292_22572928_22573182_22573278_22573416_22573974_22574074_22577158_22577333_22577429_22577556_22579583_22579724_22587343_22587392_22589942
H1_mix_00029002	chr15	+	261	2	ISM	ENSG00000275325.4	ENST00000622242.4	1064	7	14	14088	14	-14088	5prime_fragment	FALSE	canonical	3	102	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATGAAATAGAGAAATCCT	NA	False	NA	NA	False	ATTAAA	-19	NA	22727117	22730611	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_22727228_22730460
H1_mix_00029003	chr15	+	697	4	ISM	ENSG00000275325.4	ENST00000622242.4	1064	7	6964	-134	6964	-85	3prime_fragment	FALSE	canonical	2	8	junction_3	116.058414410828	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTATTTTGAAGTGGCAA	NA	False	NA	NA	False	AGTAAA	-8	NA	22734067	22744833	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_22734151_22741059_22741309_22742462_22742598_22744603
H1_mix_00029004	chr15	+	2808	6	FSM	ENSG00000170113.16	ENST00000559448.5	2799	6	-9	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	57.0634734309085	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAAATGTGTTTTTGT	-14	True	NA	NA	False	ATTAAA	-13	NA	22786757	22826076	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_22786835_22810748_22810797_22812162_22812254_22813632_22813715_22820312_22820474_22823727
H1_mix_00029007	chr15	+	3113	7	FSM	ENSG00000140157.16	ENST00000674477.1	2099	7	-28	-986	0	0	multi-exon	FALSE	canonical	3	135	junction_2	345.23023718479	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTAGCACTTGAGATTG	-33	True	NA	9	True	AATAAA	-21	NA	22838657	22868384	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_22838922_22839654_22839791_22851638_22851871_22853211_22853269_22858539_22858631_22860628_22860790_22866212
H1_mix_00029009	chr15	+	1971	1	FSM	ENSG00000274099.1	ENST00000614297.1	2181	1	112	98	112	-98	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGAAAAATTACTGAATAT	NA	False	NA	NA	False	NA	NA	NA	23179980	23181951	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_23180000_23182000
H1_mix_00029010	chr15	+	3005	8	NNC	ENSG00000274471.2	novel	883	6	NA	NA	-5837	-1	intron_retention	FALSE	canonical	3	22	junction_5	7.53766054758453	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGATGCTCCTGGTTTTTG	8	True	NA	NA	False	AATAAA	-17	NA	23303769	23314565	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_23303819_23304427_23304531_23309139_23309458_23309606_23309736_23310187_23310298_23310802_23311513_23311604_23311730_23313104
H1_mix_00029011	chr15	+	883	6	FSM	ENSG00000274471.2	ENST00000619355.1	883	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	12.6901536633722	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAATCATATTAGCTGTA	5845	False	NA	NA	False	NA	NA	NA	23309606	23313276	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_23309736_23310187_23310298_23310802_23310975_23311337_23311513_23311604_23311730_23313104
H1_mix_00029012	chr15	+	4278	1	FSM	ENSG00000185823.5	ENST00000329468.5	7619	1	-2855	6196	-2855	-6196	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCCACCACACCAAAAATG	NA	False	NA	NA	False	NA	NA	NA	24672919	24677197	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_24672900_24677200
H1_mix_00029013	chr15	+	525	5	FSM	ENSG00000128739.23	ENST00000400098.6	525	5	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	3294.9686644944	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGCTGAACTGAGGCAGG	-15	True	NA	NA	False	NA	NA	NA	24823636	24967985	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_24823824_24886515_24886590_24920010_24920125_24962113_24962210_24967931
H1_mix_00029016	chr15	+	1317	10	FSM	ENSG00000128739.23	ENST00000577565.1	1298	10	-19	0	-1	0	multi-exon	FALSE	canonical	3	32	junction_3	2424.93588053197	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTAATAATAAATGCATAGA	7	True	NA	-13	True	NA	NA	NA	24954985	24978548	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_24955063_24962113_24962210_24967931_24968083_24974287_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
H1_mix_00029017	chr15	+	2094	5	NNC	ENSG00000224078.15	novel	17832	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	363.486244581552	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGAGTTTTGTGGTTTT	-2	True	NA	38	True	AATATA	-20	NA	24981993	25002404	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_24982438_24998119_24998487_24998969_24999079_25000247_25000375_25001357
H1_mix_00029020	chr15	+	10118	51	Fusion	ENSG00000214265.11_ENSG00000224078.15	novel	9815	40	NA	NA	0	0	multi-exon	FALSE	canonical	3	18	junction_9	520.451897489095	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTCACCTATGTTAAATT	-2	True	NA	8	True	CATAAA	-2	NA	24981993	25120408	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr15_+_24982438_24998119_24998487_24998969_24999079_25000244_25000375_25001357_25001714_25002724_25002889_25019026_25019149_25019827_25019870_25020589_25020762_25037711_25037901_25039710_25040718_25040802_25040848_25051101_25051237_25053827_25053968_25055073_25055231_25056482_25056623_25059154_25059295_25059456_25059719_25061949_25062089_25064714_25064856_25067408_25067532_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00029021	chr15	+	3180	1	FSM	ENSG00000279192.1	ENST00000624480.1	3180	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTATAACTTGTTTTATT	622	False	NA	NA	False	NA	NA	NA	24985052	24988232	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_24985100_24988200
H1_mix_00029023	chr15	+	7217	39	NIC	ENSG00000224078.15	novel	11322	42	NA	NA	-14	0	intron_retention	FALSE	canonical	3	190	junction_1	467.046176396324	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTATCAGTTGAATTACT	5913	False	NA	10	True	AATAAA	-2	NA	25041959	25119875	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_25042911_25051101_25051237_25053827_25053968_25056482_25056623_25059154_25059295_25059456_25059719_25061305_25061414_25061949_25062089_25064714_25064856_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00029024	chr15	+	7352	40	Fusion	ENSG00000274640.1_ENSG00000224078.15	novel	9815	40	NA	NA	-14	0	intron_retention	FALSE	canonical	3	74	junction_9	484.349976162159	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGGGATTAAGTATGTG	5913	False	NA	25	True	AATAAA	-17	NA	25041959	25119890	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr15_+_25042911_25051101_25051237_25053827_25053968_25056482_25056623_25059154_25059295_25059456_25059719_25061305_25061414_25061949_25062089_25064714_25064856_25067411_25067532_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00029025	chr15	+	9333	36	FSM	ENSG00000224078.15	ENST00000667393.1	9319	36	-14	0	-14	0	multi-exon	FALSE	canonical	2	5	junction_13	510.795854425189	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGTAACACATTCATAT	5913	False	NA	-1	True	AATAAA	-9	NA	25041959	25122467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25042911_25051101_25051237_25053827_25053968_25056482_25056623_25059154_25059295_25059456_25059719_25061949_25062089_25064714_25064856_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095729_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00029026	chr15	+	14838	38	FSM	ENSG00000224078.15	ENST00000640631.2	15109	38	271	0	-14	0	multi-exon	FALSE	canonical	3	14	junction_26	514.15408695043	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGTAACACATTCATAT	5913	False	NA	-1	True	AATAAA	-9	NA	25041959	25122467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25042911_25051101_25051237_25053827_25053968_25056482_25056623_25059154_25059295_25059456_25059719_25061949_25062089_25064714_25064856_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25079825_25080080_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25102148_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00029027	chr15	+	11336	42	FSM	ENSG00000224078.15	ENST00000662834.1	11322	42	-14	0	-14	0	multi-exon	FALSE	canonical	3	15	junction_3	528.509050798308	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGTAACACATTCATAT	5913	False	NA	-1	True	AATAAA	-9	NA	25041959	25122467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25042911_25051101_25051237_25053827_25054867_25054969_25055231_25056482_25056623_25059154_25059295_25059456_25059719_25061949_25062089_25064714_25064856_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25079825_25080080_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25101822_25101932_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00029028	chr15	+	6811	38	NIC	ENSG00000224078.15	novel	9815	40	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_7	474.937349295701	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTCACCTATGTTAAATT	2293	False	NA	8	True	CATAAA	-2	NA	25051101	25120408	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_25051237_25053827_25053968_25056482_25056623_25059154_25059295_25059456_25059719_25061949_25062089_25064714_25064856_25067411_25067532_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00029029	chr15	+	6054	33	NIC	ENSG00000224078.15	novel	9815	40	NA	NA	-130	-1	combination_of_known_junctions	FALSE	canonical	3	244	junction_1	436.308265270955	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTTCACCTATGTTAAAT	NA	False	NA	7	True	CATAAA	-1	NA	25059537	25120407	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_25059719_25061949_25062089_25064714_25064856_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00029030	chr15	+	8250	35	FSM	ENSG00000224078.15	ENST00000670542.1	8250	35	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_9	502.451647727916	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGTAACACATTCATAT	NA	False	NA	-1	True	AATAAA	-9	NA	25059667	25122467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25059719_25061949_25062089_25064714_25064856_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25079825_25080080_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095729_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00029033	chr15	+	251	1	FSM	ENSG00000207197.1	ENST00000384468.1	92	1	15	-174	15	174	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCACACTGCCAGCCTG	NA	False	NA	NA	False	NA	NA	NA	25077065	25077316	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25077100_25077300
H1_mix_00029035	chr15	+	5021	27	NIC	ENSG00000224078.15	novel	7500	29	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	97	junction_14	544.504575048292	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAATTCTTTTGTGTTTT	NA	False	NA	26	True	CATAAA	-20	NA	25078861	25120426	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095729_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25101822_25101932_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109100_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118270_25118383_25119064
H1_mix_00029036	chr15	+	4134	24	NIC	ENSG00000224078.15	novel	6939	25	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	99	junction_3	472.393983465461	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGGGATTAAGTATGTG	NA	False	NA	25	True	AATAAA	-17	NA	25078874	25119890	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_25078996_25081090_25081225_25082588_25082706_25083366_25083528_25085189_25085323_25087466_25087600_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00029040	chr15	+	387	1	FSM	ENSG00000206656.1	ENST00000383929.1	92	1	7	-302	7	302	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCCTGTGGTGTATGGGT	4536	False	NA	NA	False	NA	NA	NA	25083594	25083981	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25083600_25084000
H1_mix_00029041	chr15	+	5057	22	FSM	ENSG00000224078.15	ENST00000666022.1	5055	22	-2	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	524.361605164338	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTACTGGGATTAAGTAT	6326	False	NA	22	True	AATAAA	-14	NA	25085384	25119887	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25086615_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118270_25118383_25119064
H1_mix_00029042	chr15	+	6711	19	FSM	ENSG00000224078.15	ENST00000668163.1	6701	19	-10	0	0	0	multi-exon	FALSE	canonical	3	220	junction_12	395.210914154286	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGTAACACATTCATAT	NA	False	NA	-1	True	AATAAA	-9	NA	25089063	25122467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109100_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00029043	chr15	+	4451	20	NNC	ENSG00000224078.15	novel	5995	19	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	492.632703552472	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAATTCTTTTGTGTTTT	NA	False	NA	26	True	CATAAA	-20	NA	25089132	25120426	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_25089614_25089911_25090011_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00029045	chr15	+	3788	17	FSM	ENSG00000224078.15	ENST00000669072.1	3788	17	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_15	414.122547532732	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTCACCTATGTTAAATT	3334	False	NA	8	True	CATAAA	-2	NA	25093765	25120408	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118270_25118383_25119064
H1_mix_00029046	chr15	+	4780	18	ISM	ENSG00000224078.15	ENST00000655746.1	6860	25	11374	2672	0	-80	3prime_fragment	FALSE	canonical	3	97	junction_5	533.675704698525	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTAGCACCAAATTTCT	3605	False	NA	-70	True	ATTAAA	-31	NA	25094036	25119795	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25101822_25101932_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00029047	chr15	+	4671	17	ISM	ENSG00000224078.15	ENST00000669778.1	9720	18	4491	2672	0	-80	3prime_fragment	FALSE	canonical	3	330	junction_5	436.351993807752	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTAGCACCAAATTTCT	3605	False	NA	-70	True	ATTAAA	-31	NA	25094036	25119795	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00029052	chr15	+	2414	1	FSM	ENSG00000279050.1	ENST00000624188.1	2414	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGGAAGAAAAAAATACTGG	5019	False	NA	NA	False	NA	NA	NA	25135641	25138055	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25135600_25138100
H1_mix_00029053	chr15	+	2183	10	FSM	ENSG00000186297.12	ENST00000355395.9	2183	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	50.7849496515563	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGAAAGTACTGCATGATC	194	False	NA	NA	False	AATGAA	-32	NA	26866910	26948752	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_26867112_26869174_26869335_26880845_26880968_26883165_26883234_26883336_26883558_26914802_26914886_26937184_26937329_26939924_26940078_26943214_26943427_26947933
H1_mix_00029055	chr15	+	2691	11	NNC	ENSG00000186297.12	novel	2553	11	NA	NA	-157	-7	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	56.5158384879849	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGACATATAGGATTC	37	False	NA	9	True	AATAAA	-13	NA	26866753	26949200	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_26867112_26868728_26868794_26869174_26869335_26880845_26880968_26883165_26883234_26883336_26883558_26914802_26914886_26937184_26937329_26939924_26940078_26943456_26943507_26947933
H1_mix_00029056	chr15	+	653	5	FSM	ENSG00000186297.12	ENST00000554038.5	653	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	40.8503365959205	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCCGACACGGAAATGGT	7	False	NA	NA	False	NA	NA	NA	26867162	26883215	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_26867419_26868728_26868794_26869174_26869335_26880845_26880968_26883165
H1_mix_00029059	chr15	+	967	6	FSM	ENSG00000248334.6	ENST00000515318.6	1518	6	0	551	0	-551	multi-exon	FALSE	canonical	2	2	junction_3	0.8	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAGTTTTTATTTAAGTA	NA	False	NA	NA	False	TATAAA	-3	NA	28738021	28747875	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_28738186_28741109_28741267_28744748_28744900_28745596_28745756_28745979_28746150_28747709
H1_mix_00029061	chr15	+	399	3	ISM	ENSG00000261377.6	ENST00000566321.5	1069	7	6966	2183	6966	-2183	internal_fragment	FALSE	canonical	3	105	junction_2	31	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGAAGAATTTAGCTACT	NA	False	NA	NA	False	AATGAA	-36	NA	28808331	28816816	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_28808418_28815346_28815596_28816752
H1_mix_00029062	chr15	+	3046	12	FSM	ENSG00000034053.15	ENST00000559814.5	2555	12	-381	-110	-195	110	multi-exon	FALSE	canonical	3	101	junction_3	11.7880735358221	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTCAACAAACAGACGTTC	NA	False	NA	-7	True	NA	NA	NA	28885778	29108730	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_28886279_28921639_28921750_28995752_28995807_29053844_29054836_29074920_29075002_29076054_29076092_29093074_29093221_29098489_29098577_29101598_29101785_29105378_29105559_29106606_29106820_29108269
H1_mix_00029063	chr15	+	3249	14	NIC	ENSG00000034053.15	novel	3941	15	NA	NA	-16	5	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	30.0447398146921	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTATTTAGATGCTATTA	7	True	NA	39	True	AATAAA	-29	NA	28886005	29117722	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_28886279_28921639_28921719_28995752_28995807_29053844_29054836_29074920_29075002_29076054_29076092_29093074_29093221_29098489_29098577_29101598_29101785_29105378_29105559_29106606_29106820_29108269_29108390_29113875_29114017_29117061
H1_mix_00029064	chr15	+	3385	14	NNC	ENSG00000034053.15	novel	3941	15	NA	NA	-77	5	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	32.7957639059912	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTATTTAGATGCTATTA	NA	False	NA	39	True	AATAAA	-29	NA	28885896	29117722	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_28886279_28921639_28921750_28995756_28995807_29053844_29054836_29074920_29075002_29076054_29076092_29093074_29093221_29098489_29098577_29101598_29101785_29105378_29105559_29106606_29106820_29108269_29108390_29113875_29114017_29117061
H1_mix_00029065	chr15	+	273	1	FSM	ENSG00000234664.1	ENST00000436882.1	273	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGTGCATTTTTGATAA	97	False	NA	NA	False	AAAACA	-43	NA	29730712	29730985	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_29730700_29731000
H1_mix_00029066	chr15	+	593	4	FSM	ENSG00000178081.12	ENST00000565158.5	593	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	4.96655480858378	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATTCTGGAACCATGGC	NA	False	NA	NA	False	NA	NA	NA	30103719	30131227	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_30104009_30110301_30110427_30127684_30127764_30131127
H1_mix_00029067	chr15	+	1047	3	FSM	ENSG00000225930.4	ENST00000648232.1	1148	3	101	0	101	0	multi-exon	FALSE	canonical	1	1	junction_2	3	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATCAGTTCTTAACTTTT	NA	False	NA	NA	False	AATACA	-19	NA	30195909	30217552	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_30196115_30199274_30199332_30216767
H1_mix_00029068	chr15	+	2669	1	FSM	ENSG00000270055.1	ENST00000602663.1	2351	1	-324	6	-324	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATACTTTCAGTTTTCTG	3012	False	NA	NA	False	AATAAA	-10	NA	30487638	30490307	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_30487600_30490300
H1_mix_00029069	chr15	+	2190	13	NNC	ENSG00000284906.3	novel	7464	15	NA	NA	-41	35455	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	73.9802432335072	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAAAGGCCCACGTGGC	320	False	NA	NA	False	NA	NA	NA	30626087	30721061	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_30626950_30630702_30630774_30633489_30633587_30634169_30634424_30635079_30635189_30635486_30635634_30638745_30638821_30641521_30641618_30644638_30644703_30646113_30646296_30647667_30647715_30716219_30716343_30720998
H1_mix_00029070	chr15	+	2285	13	NNC	ENSG00000284906.3	novel	7464	15	NA	NA	-41	-37288	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	74.0237855917497	40	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACCCACAGACCCTCTGAA	320	False	NA	NA	False	NA	NA	NA	30626087	30735714	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_30626950_30630702_30630774_30633489_30633587_30634169_30634424_30635079_30635189_30635486_30635634_30638745_30638821_30644638_30644703_30646113_30646296_30647667_30647715_30658765_30658845_30716219_30716343_30735539
H1_mix_00029071	chr15	+	589	5	FSM	ENSG00000285077.3	ENST00000566362.1	589	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	49.4317711598522	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAAGAAAAGAAATTG	4046	False	NA	NA	False	NA	NA	NA	30630723	30635387	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_30630774_30633489_30633587_30634169_30634424_30635079_30635189_30635308
H1_mix_00029073	chr15	+	5419	3	ISM	ENSG00000187951.11	ENST00000602616.6	5637	5	89859	-33	89836	33	3prime_fragment	FALSE	canonical	3	27	junction_2	6.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTCAAAACCCCTCCCC	NA	False	NA	44	True	AAAAAG	-17	NA	30748575	30773026	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_30748671_30750401_30750557_30767857
H1_mix_00029074	chr15	+	439	1	Intergenic	novelGene_462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCTTGGCTTTGGAGTG	NA	False	NA	NA	False	NA	NA	NA	30812723	30813162	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_30812700_30813200
H1_mix_00029075	chr15	+	2157	4	FSM	ENSG00000198690.10	ENST00000658773.1	2157	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	88.6954840388669	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACGTAACAATTTACCAAAA	3	True	NA	NA	False	NA	NA	NA	30903863	30911212	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_30903895_30904511_30905898_30908117_30908259_30910613
H1_mix_00029076	chr15	+	7930	13	FSM	ENSG00000198690.10	ENST00000655421.1	7929	13	-1	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	28.4413382635596	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTATAGCAAATTCCTGC	-14	True	NA	NA	False	NA	NA	NA	30903891	30943056	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_30904012_30904511_30905898_30908117_30908259_30910613_30910816_30913857_30914092_30918163_30918296_30920544_30920654_30922234_30922355_30925126_30928657_30929202_30929398_30930542_30930672_30937118_30937260_30941565
H1_mix_00029080	chr15	+	855	3	FSM	ENSG00000198690.10	ENST00000562892.2	855	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	93	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTCTTTCTTGGGTTATT	323	False	NA	NA	False	NA	NA	NA	30904228	30910965	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_30904591_30908117_30908259_30910613
H1_mix_00029081	chr15	+	6476	12	FSM	ENSG00000198690.10	ENST00000661974.1	6476	12	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	49.3526691316004	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAATAAATAAATATTTGC	1264	False	NA	NA	False	NA	NA	NA	30905169	30943079	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_30905898_30908117_30908259_30913857_30914092_30918163_30918296_30920544_30920654_30922234_30922355_30925126_30925292_30925788_30928657_30929202_30929398_30930542_30930672_30937118_30937260_30941565
H1_mix_00029082	chr15	+	6701	4	FSM	ENSG00000198690.10	ENST00000562881.2	6701	4	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	10.6249183003395	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATATTTGCAAA	NA	False	NA	NA	False	NA	NA	NA	30924483	30943082	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_30929398_30930542_30930672_30937118_30937260_30941565
H1_mix_00029084	chr15	+	6866	2	FSM	ENSG00000166923.12	ENST00000651154.1	14575	2	7	7702	7	2821	multi-exon	FALSE	canonical	0	0	junction_1	0	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGGATTATATACCTTGA	9	False	NA	NA	False	NA	NA	NA	32718010	32737404	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_32718162_32730689
H1_mix_00029085	chr15	+	511	1	FSM	ENSG00000182405.6	ENST00000397766.4	6604	1	205	5888	205	-5888	mono-exon	FALSE	NA	NA	NA	NA	NA	310	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCACACCTGGCAGAAAAGT	179	False	NA	NA	False	NA	NA	NA	34102287	34102798	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_34102300_34102800
H1_mix_00029087	chr15	+	1344	1	FSM	ENSG00000261559.1	ENST00000568912.1	1481	1	27	110	27	-110	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAACAAGGAGGCCATCAAG	150	False	NA	NA	False	NA	NA	NA	34494446	34495790	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_34494400_34495800
H1_mix_00029088	chr15	+	419	2	Genic_Genomic	ENSG00000231409.3	novel	315	1	NA	NA	-21	56151	multi-exon	FALSE	non_canonical	0	0	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGCCAGTGGCTCAGCAA	5	False	NA	NA	False	NA	NA	NA	34943058	34999545	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr15_+_34943445_34999512
H1_mix_00029089	chr15	+	367	1	FSM	ENSG00000259397.3	ENST00000594613.1	730	1	422	-59	422	59	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCATAAGGGGATTTTTT	451	False	NA	NA	False	NA	NA	NA	35092902	35093269	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_35092900_35093300
H1_mix_00029091	chr15	+	8102	8	NNC	ENSG00000166068.13	novel	7270	7	NA	NA	-814	1183	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	98.1030278922758	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAGAATATTCAGTATTG	NA	False	NA	NA	False	AAGAAA	-14	NA	38252021	38358432	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_38253218_38299372_38299548_38322240_38322410_38324762_38324810_38339736_38339896_38349421_38349524_38351013_38357021_38358185
H1_mix_00029093	chr15	+	3637	11	FSM	ENSG00000128829.12	ENST00000559624.5	3548	11	0	-89	0	89	multi-exon	FALSE	canonical	3	391	junction_10	48.2704878782057	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTGACCTGCACGGATG	1	True	NA	NA	False	NA	NA	NA	39934145	39975518	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_39934340_39939504_39939618_39943382_39943486_39949115_39949269_39953903_39953985_39955619_39955769_39961783_39961900_39965685_39965844_39967343_39967880_39972907_39973015_39973591
H1_mix_00029094	chr15	+	1314	1	FSM	ENSG00000128829.12	ENST00000624709.1	1314	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTCTACCTGTGTTTAT	NA	False	NA	NA	False	CATAAA	-28	NA	39976978	39978292	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_39977000_39978300
H1_mix_00029095	chr15	+	222	1	FSM	ENSG00000275636.1	ENST00000616620.1	456	1	1	233	1	-233	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTCCTAAAGAAATAATCCA	NA	False	NA	NA	False	NA	NA	NA	40078892	40079114	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40078900_40079100
H1_mix_00029096	chr15	+	598	4	FSM	ENSG00000156970.13	ENST00000560120.5	583	4	-15	0	-15	0	multi-exon	FALSE	canonical	2	5	junction_1	354.080028618767	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGGATTCAACAGAAGGCT	-46	True	NA	NA	False	NA	NA	NA	40161007	40176621	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40161256_40170061_40170122_40170536_40170682_40176476
H1_mix_00029097	chr15	+	526	5	FSM	ENSG00000156970.13	ENST00000559414.5	526	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	332.921443436736	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTATATCTCATGGGCAG	-11	True	NA	NA	False	NA	NA	NA	40161042	40176550	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40161256_40165052_40165197_40170061_40170122_40170536_40170572_40176476
H1_mix_00029098	chr15	+	3673	23	NNC	ENSG00000156970.13	novel	3669	23	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_12	155.73998913213	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGCTTCTAACATGTCA	26	True	NA	15	True	AATAAA	-16	NA	40161079	40221123	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_40161256_40165052_40165197_40170061_40170122_40170536_40170682_40176476_40176674_40183713_40183884_40185164_40185380_40185550_40185643_40196544_40196775_40199614_40199728_40200243_40200360_40200930_40200981_40202389_40202466_40202588_40202695_40206183_40206459_40208636_40208771_40209634_40209776_40210109_40210211_40212498_40212649_40213331_40213475_40217495_40217668_40218455_40218563_40220563
H1_mix_00029099	chr15	+	2030	1	FSM	ENSG00000273786.1	ENST00000613987.1	684	1	-1489	143	-1489	-143	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTGTAATCTCACTTTCA	7454	False	NA	NA	False	NA	NA	NA	40224896	40226926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40224900_40226900
H1_mix_00029100	chr15	+	3516	1	FSM	ENSG00000260648.3	ENST00000568093.3	4028	1	39	473	39	-473	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGAGAGACAGGCATATGA	NA	False	NA	NA	False	NA	NA	NA	40232120	40235636	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40232100_40235600
H1_mix_00029101	chr15	+	4045	10	FSM	ENSG00000137843.12	ENST00000455577.6	4215	10	170	0	-159	0	multi-exon	FALSE	canonical	2	3	junction_9	23.7351643072332	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGGCTTCCTGTGTCTCT	0	True	NA	15	True	ATTAAA	-17	NA	40239260	40277486	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40239803_40240598_40240682_40253177_40253290_40264780_40264990_40265841_40266496_40272223_40272722_40272865_40273000_40273345_40273473_40273550_40273677_40275926
H1_mix_00029104	chr15	+	4020	1	FSM	ENSG00000259198.1	ENST00000559030.1	4020	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	275	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCCTCGTGTGGTGGTGT	3534	False	NA	NA	False	TATAAA	-38	NA	40312614	40316634	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40312600_40316600
H1_mix_00029107	chr15	+	1682	9	FSM	ENSG00000128944.14	ENST00000416151.6	1899	9	217	0	-1	0	multi-exon	FALSE	canonical	3	7	junction_8	151.70031105769	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACCTACATGAAACAATAC	-33	True	NA	26	True	AATAAA	-26	NA	40382937	40394154	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40383045_40383227_40383323_40386361_40386495_40387158_40387207_40389505_40389612_40389835_40389930_40391492_40391555_40391948_40392024_40393192
H1_mix_00029108	chr15	+	1292	7	NIC	ENSG00000128944.14	novel	1757	9	NA	NA	-14	-1	combination_of_known_junctions	FALSE	canonical	2	8	junction_2	172.842654843454	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGACTGTAACATTGAGG	-9	True	NA	15	True	AATAAA	-15	NA	40382961	40394245	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_40383045_40383227_40383323_40389505_40389612_40389835_40389930_40391492_40391555_40391948_40392024_40393468
H1_mix_00029113	chr15	+	4856	7	NIC	ENSG00000140320.12	novel	4779	7	NA	NA	-89	-1	combination_of_known_junctions	FALSE	canonical	3	35	junction_2	17.3533538225004	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAAGGATCGTTTCCTGT	749	False	NA	28	True	AATAAA	-22	NA	40440863	40468227	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_40441269_40458450_40459897_40461914_40462295_40463860_40464021_40464470_40464548_40465334_40465436_40465940
H1_mix_00029114	chr15	+	4762	7	NIC	ENSG00000140320.12	novel	4779	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	12.0196598214019	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGGATCGTTTCCTGTG	9	True	NA	29	True	AATAAA	-23	NA	40440952	40468228	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_40441269_40458450_40459897_40461911_40462295_40463860_40464021_40464470_40464548_40465343_40465436_40465940
H1_mix_00029116	chr15	+	1612	10	FSM	ENSG00000051180.17	ENST00000382643.7	1588	10	-24	0	21	0	multi-exon	FALSE	canonical	1	1	junction_3	186.659788233058	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGTCTGCACAGATTCT	NA	False	NA	16	True	AATAAA	-25	NA	40695149	40731593	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40695322_40698756_40698846_40701063_40701202_40701805_40701927_40709024_40709117_40718804_40718900_40728710_40728825_40729504_40729635_40729852_40729975_40731054
H1_mix_00029117	chr15	+	2116	9	FSM	ENSG00000051180.17	ENST00000525066.5	1545	9	214	-785	-22	2	multi-exon	FALSE	canonical	2	17	junction_5	129.069688056491	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGCCTTGTGGCCCCCCT	190	False	NA	16	True	AATAAA	-17	NA	40695400	40732342	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40695426_40698756_40698846_40701063_40701202_40706176_40706295_40709024_40709117_40728710_40728825_40729504_40729635_40729852_40729975_40731054
H1_mix_00029120	chr15	+	670	1	FSM	ENSG00000188277.10	ENST00000344320.8	2470	1	262	1538	262	-1538	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGACCTCAGTGATCCCT	254	False	NA	NA	False	NA	NA	NA	40770241	40770911	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40770200_40770900
H1_mix_00029121	chr15	+	580	6	FSM	ENSG00000166140.17	ENST00000568062.5	580	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	35.0679340708859	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGGCTGGCTGCCCTAAA	-14	True	NA	NA	False	NA	NA	NA	40807641	40810099	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40807869_40808043_40808076_40809118_40809241_40809407_40809459_40809851_40809971_40810070
H1_mix_00029127	chr15	+	370	1	ISM	ENSG00000157021.9	ENST00000528023.3	890	2	657	186	657	-186	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGTAAGAGCGAATTCAAA	653	False	NA	NA	False	NA	NA	NA	41163818	41164188	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_41163800_41164200
H1_mix_00029128	chr15	+	717	7	FSM	ENSG00000187446.12	ENST00000560784.5	717	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	42.4617474911243	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGATCAGGATGGGGACA	-54	True	NA	NA	False	NA	NA	NA	41231221	41278840	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_41231450_41243666_41243740_41256909_41256991_41262755_41262884_41264164_41264236_41270556_41270619_41278766
H1_mix_00029129	chr15	+	702	6	NIC	ENSG00000187446.12	novel	568	6	NA	NA	-1	4	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	34.6606405018719	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGAGGCTAGCGTAAC	16	True	NA	12	True	AATAAA	-26	NA	41231291	41272379	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_41231450_41243666_41243740_41256909_41256991_41262755_41262884_41270556_41270619_41272179
H1_mix_00029130	chr15	+	1548	4	FSM	ENSG00000247556.6	ENST00000557993.5	1482	4	-66	0	-25	0	multi-exon	FALSE	canonical	1	6	junction_3	455.511678103744	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCTTTGTATGTATATGT	0	True	NA	16	True	AATAAA	-18	NA	41283964	41289155	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_41284111_41285224_41285364_41286010_41286101_41287982
H1_mix_00029134	chr15	+	1241	6	FSM	ENSG00000137825.11	ENST00000462816.5	854	6	43	-430	43	-22	multi-exon	FALSE	canonical	1	1	junction_2	2.44948974278318	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTAATAAAACTCAAAGACAA	7577	False	NA	-17	True	NA	NA	NA	41501481	41503529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_41501560_41501634_41501852_41501996_41502202_41502401_41502504_41502787_41502860_41502962
H1_mix_00029137	chr15	+	3386	9	FSM	ENSG00000174197.18	ENST00000566718.6	3525	9	139	0	82	0	multi-exon	FALSE	canonical	3	3	junction_1	9.20597631976098	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGAGGAAGGCTGCTC	36	False	NA	-97	True	AAGAAA	-37	NA	41621272	41713359	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_41621299_41668827_41669959_41696074_41697024_41698862_41698942_41699063_41699160_41707727_41707860_41708103_41708209_41710690_41711350_41713150
H1_mix_00029139	chr15	+	2305	8	NIC	ENSG00000174197.18	novel	14568	23	NA	NA	29	-16	combination_of_known_splicesites	FALSE	canonical	3	8	junction_1	8.13909687613949	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCCAAAACTAAGCATTTT	0	True	NA	NA	False	AAGAAA	-21	NA	41660433	41713343	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_41660526_41696074_41697024_41698862_41698942_41699063_41699160_41707727_41707860_41708103_41708209_41710690_41711350_41713150
H1_mix_00029140	chr15	+	4842	5	FSM	ENSG00000174197.18	ENST00000568255.2	4842	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	10.6770782520313	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTTCCTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	41759497	41769290	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_41760530_41761738_41761851_41762128_41762363_41764885_41765063_41766003
H1_mix_00029141	chr15	+	7283	30	ISM	ENSG00000137802.14	ENST00000457542.7	7182	31	455	0	237	0	3prime_fragment	FALSE	canonical	3	13	junction_6	4.97150022694758	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGATGCCGGCCAGTG	190	False	NA	32	True	AATAAA	-17	NA	41774938	41827855	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_41775390_41799822_41799915_41810882_41810946_41811177_41811236_41811956_41812128_41812515_41812654_41812918_41813102_41813620_41813782_41814549_41814740_41815258_41815406_41815623_41815800_41816558_41816651_41816909_41817036_41817387_41817459_41817613_41817736_41818008_41818085_41818193_41818306_41818518_41818583_41818822_41818958_41819245_41819380_41819594_41819651_41820831_41821069_41821583_41821751_41821964_41822111_41822224_41822423_41822592_41822678_41822938_41823223_41823446_41824062_41824483_41824570_41825208
H1_mix_00029150	chr15	+	3952	6	FSM	ENSG00000137814.12	ENST00000391623.8	2853	6	-35	-1064	-25	0	multi-exon	TRUE	canonical	3	25	junction_2	72.488343890587	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAGTCCTAGTCTGAA	3	True	NA	81	True	AATAAA	-21	NA	42548802	42569994	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_42548966_42559338_42559409_42560781_42560871_42561269_42561403_42563748_42563858_42566606
H1_mix_00029154	chr15	+	441	1	FSM	ENSG00000260490.2	ENST00000569826.2	507	1	86	-20	86	20	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAATTACATTGTCTTAC	NA	False	NA	NA	False	AGTAAA	-37	NA	42572012	42572453	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_42572000_42572500
H1_mix_00029155	chr15	+	766	1	FSM	ENSG00000274403.1	ENST00000617465.1	629	1	-56	-81	-56	81	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACTGCCTCCTAGAGACTC	NA	False	NA	NA	False	NA	NA	NA	42726526	42727292	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_42726500_42727300
H1_mix_00029156	chr15	+	2025	12	FSM	ENSG00000137842.7	ENST00000564494.1	2025	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_10	5.61579825872018	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCAGGGAACCTTTGAGG	536	False	NA	NA	False	NA	NA	NA	43134281	43184989	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43134369_43135511_43135650_43138573_43138620_43146492_43146635_43148754_43148880_43149028_43149152_43151789_43151946_43154671_43154832_43160680_43160795_43169592_43169678_43181180_43181300_43184259
H1_mix_00029157	chr15	+	1577	2	FSM	ENSG00000137842.7	ENST00000566122.1	848	2	-108	-621	-108	0	multi-exon	FALSE	canonical	3	21	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTCGGAAGTGTTTTCAA	6673	False	NA	NA	False	NA	NA	NA	43180552	43185089	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43181300_43184259
H1_mix_00029158	chr15	+	1918	8	FSM	ENSG00000166946.14	ENST00000564630.5	2079	8	0	161	0	-161	multi-exon	FALSE	canonical	3	222	junction_5	17.2532162041677	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCCAACATGGCGAAACCT	NA	False	NA	NA	False	NA	NA	NA	43185117	43193145	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43185608_43185819_43186234_43189198_43189281_43190054_43190152_43190324_43190399_43190965_43191043_43191394_43191676_43192742
H1_mix_00029160	chr15	+	1831	11	FSM	ENSG00000166946.14	ENST00000565296.5	1831	11	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_9	76.0702964369142	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGTGCCCTTCCAAAG	18	True	NA	NA	False	AATAAA	-21	NA	43185438	43195195	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43185608_43185819_43185880_43186153_43186234_43189198_43189281_43190054_43190152_43190324_43190399_43190965_43191043_43191394_43191676_43192742_43192804_43194080_43194462_43194726
H1_mix_00029161	chr15	+	1499	9	FSM	ENSG00000166946.14	ENST00000444658.7	1479	9	-20	0	0	0	multi-exon	FALSE	canonical	3	211	junction_7	19.5923294939627	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAATGAGTGCCCTTCCA	-5	True	NA	NA	False	AATAAA	-18	NA	43185919	43195192	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43186234_43189198_43189281_43190054_43190152_43190324_43190399_43190965_43191043_43191394_43191676_43192742_43192804_43194414_43194462_43194726
H1_mix_00029163	chr15	+	3516	12	FSM	ENSG00000168803.16	ENST00000428046.7	3514	12	-2	0	0	0	multi-exon	FALSE	canonical	3	16	junction_9	10.3348883571799	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTCCCTGAGTTCTGTG	-13	True	NA	14	True	AATAAA	-14	NA	43330671	43353898	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43330860_43331899_43332001_43333310_43333435_43334944_43335171_43335695_43335827_43336625_43336687_43340264_43340353_43342993_43343076_43345853_43345981_43348906_43349046_43350940_43351042_43351750
H1_mix_00029164	chr15	+	475	6	FSM	ENSG00000168803.16	ENST00000563551.1	475	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	23.7873916182502	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGGCCCTTTAGTAGCCA	1290	False	NA	NA	False	ATTAAA	-26	NA	43331974	43345877	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43332001_43333310_43333435_43335695_43335827_43340264_43340353_43342993_43343076_43345853
H1_mix_00029165	chr15	+	969	8	FSM	ENSG00000168803.16	ENST00000610420.4	974	8	5	0	5	0	multi-exon	FALSE	canonical	3	45	junction_3	3.39867921524866	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTGTCTCTCCCCCAAT	4258	False	NA	NA	False	NA	NA	NA	43334942	43349077	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43335171_43335695_43335827_43336625_43336687_43340264_43340353_43342993_43343076_43345853_43345981_43347015_43347097_43348906
H1_mix_00029167	chr15	+	1462	1	ISM	ENSG00000166963.13	ENST00000382031.5	10553	7	19192	9	12542	0	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTGTAGTGCTGCTTAG	2374	False	NA	8	True	AATAAA	-15	NA	43530149	43531611	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_43530100_43531600
H1_mix_00029169	chr15	+	2057	3	ISM	ENSG00000237289.10	ENST00000437534.3	2396	9	2620	0	2605	0	3prime_fragment	FALSE	canonical	3	136	junction_2	5.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTGTGTTACTTCTAA	2571	False	NA	20	True	AGTAAA	-20	NA	43596646	43599406	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_43598328_43598826_43598953_43599156
H1_mix_00029172	chr15	+	728	3	FSM	ENSG00000140264.21	ENST00000630046.2	862	3	134	0	134	0	multi-exon	FALSE	canonical	0	0	junction_2	4037.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTGGACAGTCAGAGAGG	20	False	NA	NA	False	NA	NA	NA	43791975	43799079	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43792384_43792974_43793084_43798868
H1_mix_00029174	chr15	+	7057	5	FSM	ENSG00000242028.8	ENST00000406925.6	7122	5	65	0	65	0	multi-exon	FALSE	canonical	3	9	junction_1	1330.93378873631	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGCTAGTACCTGAGCT	2237	False	NA	NA	False	AATAAA	-18	NA	43796206	43804427	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_43800149_43800494_43800785_43801131_43801188_43801517_43801570_43801710
H1_mix_00029175	chr15	+	3869	13	NIC	ENSG00000092470.12	novel	3932	13	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_1	37.6559719330443	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTCCTCACTTTTGTGG	NA	False	NA	27	True	AATAAA	-16	NA	43826954	43868412	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_43827093_43828074_43828367_43835060_43835151_43836160_43836217_43839604_43839729_43842414_43842517_43842627_43842672_43843900_43844055_43851086_43851246_43856945_43857164_43858670_43858824_43861332_43861387_43866127
H1_mix_00029177	chr15	+	3764	9	FSM	ENSG00000166734.20	ENST00000345795.6	3764	9	0	0	0	0	multi-exon	TRUE	canonical	3	71	junction_8	54.5067369689289	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCACTGTTTTGCTGATTC	-6	True	NA	10	True	AATAAA	-17	NA	44288759	44415757	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_44289357_44322964_44323020_44328684_44328788_44331987_44332079_44337762_44337908_44338236_44338318_44379689_44379789_44380805_44380977_44413335
H1_mix_00029178	chr15	+	603	5	FSM	ENSG00000137770.14	ENST00000558791.5	591	5	-12	0	-12	0	multi-exon	FALSE	canonical	3	54	junction_1	174.360796912609	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGACAGGCTGTGGAAGCT	-12	True	NA	NA	False	NA	NA	NA	44427609	44490804	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_44427693_44458990_44459201_44484223_44484363_44486550_44486701_44490783
H1_mix_00029180	chr15	+	4255	11	FSM	ENSG00000137770.14	ENST00000558373.5	4255	11	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_3	130.109991929905	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTGTACATTGTTTTC	NA	False	NA	16	True	TATAAA	-30	NA	44459002	44527232	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_44459201_44484223_44484363_44486550_44486701_44496379_44496459_44497026_44497139_44499726_44499814_44514597_44514661_44514764_44514845_44519168_44519296_44521310_44521407_44524108
H1_mix_00029181	chr15	+	1081	3	FSM	ENSG00000166710.22	ENST00000559916.1	1081	3	0	0	0	0	multi-exon	FALSE	canonical	3	2439	junction_2	72	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAGAACAGGGAATTGATT	-4	True	NA	NA	False	NA	NA	NA	44711512	44717029	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_44711614_44715422_44715702_44716328
H1_mix_00029182	chr15	+	4758	9	FSM	ENSG00000140263.15	ENST00000674405.1	4758	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	125.049927528967	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGTTGCATATTTTTGT	-24	True	NA	NA	False	AATAAA	-14	NA	45023167	45077172	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_45023350_45040407_45040442_45043256_45043422_45061066_45061227_45065270_45065390_45068180_45068247_45068876_45068979_45072316_45072439_45073364
H1_mix_00029184	chr15	+	2478	8	FSM	ENSG00000171763.20	ENST00000531970.5	2464	8	-14	0	-9	0	multi-exon	FALSE	canonical	3	13	junction_5	21.9805108480867	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAAAAAACT	14	True	NA	NA	False	AATAAA	-7	NA	45402360	45421327	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_45403519_45405319_45405506_45410371_45410531_45414570_45414781_45415586_45415810_45417268_45417400_45418556_45418683_45421042
H1_mix_00029185	chr15	+	2433	9	NIC	ENSG00000171763.20	novel	2464	8	NA	NA	29	-197	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	31.5988033792421	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCGTTAAGTTGCAAGGAC	5	True	NA	NA	False	NA	NA	NA	45402403	45421130	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_45403519_45405319_45405506_45407028_45407224_45410371_45410531_45414570_45414781_45415586_45415810_45417268_45417400_45418556_45418683_45421042
H1_mix_00029186	chr15	+	279	1	FSM	ENSG00000179362.14	ENST00000598619.1	490	1	431	-220	431	89	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGGGATTCCCTGACTT	NA	False	NA	NA	False	AAAACA	-43	NA	45555912	45556191	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_45555900_45556200
H1_mix_00029187	chr15	+	3837	5	FSM	ENSG00000104164.12	ENST00000565323.6	3838	5	1	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	48.5669640805352	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTGATGTCATTTATCA	1	True	NA	12	True	AATAAA	-15	NA	45587590	45609708	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_45587797_45592134_45592277_45603099_45603188_45605427_45605515_45606394
H1_mix_00029191	chr15	+	635	7	FSM	ENSG00000128951.14	ENST00000559416.5	635	7	0	0	0	0	multi-exon	TRUE	canonical	3	54	junction_1	747.538404810527	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTGCTTCAAGTGTTTT	0	True	NA	NA	False	AAAACA	-36	NA	48331094	48342137	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_48331192_48332267_48332407_48334416_48334509_48336045_48336091_48341288_48341364_48341514_48341586_48342021
H1_mix_00029194	chr15	+	647	1	FSM	ENSG00000275580.1	ENST00000617563.1	647	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGTCTTTTCATCTG	NA	False	NA	NA	False	AATAAA	-14	NA	49343607	49344254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_49343600_49344300
H1_mix_00029195	chr15	+	590	3	FSM	ENSG00000104047.15	ENST00000561188.5	591	3	-24	25	0	-25	multi-exon	FALSE	canonical	3	11	junction_1	25.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACTCTAATTGATAAACTT	-7	True	NA	NA	False	AATAGA	-26	NA	49621044	49625496	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_49621123_49623670_49623799_49625112
H1_mix_00029202	chr15	+	474	6	FSM	ENSG00000186417.14	ENST00000558426.5	571	6	97	0	-7	0	multi-exon	FALSE	canonical	1	1	junction_1	1.16619037896906	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGATGATACCTTGGTTGG	33	False	NA	NA	False	NA	NA	NA	51377448	51400211	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_51377501_51383435_51383454_51383784_51383893_51394834_51394982_51397469_51397599_51400191
H1_mix_00029203	chr15	+	3158	11	FSM	ENSG00000104112.9	ENST00000542355.6	2163	11	-38	-957	-38	2	multi-exon	TRUE	canonical	3	29	junction_1	156.614846039576	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGTCCGTGCCATCTT	10	False	NA	20	True	AATAAA	-18	NA	51681453	51721028	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_51681838_51683078_51683125_51683218_51683435_51688259_51688403_51689218_51689369_51692158_51692337_51695874_51695992_51699318_51699403_51701106_51701245_51713332_51713414_51719407
H1_mix_00029204	chr15	+	9161	10	FSM	ENSG00000128872.10	ENST00000249700.9	9150	10	-11	0	-11	0	multi-exon	TRUE	canonical	2	4	junction_3	3.08320820566925	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGACTGGTTTTATATG	10	False	NA	NA	False	AATAAA	-20	NA	51751585	51816363	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_51751713_51766372_51766568_51768261_51768419_51773711_51773835_51776931_51777019_51781043_51781175_51782720_51782829_51798196_51798341_51806376_51806522_51808419
H1_mix_00029205	chr15	+	275	1	FSM	ENSG00000242327.1	ENST00000486386.1	453	1	230	-52	230	52	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCCAATAACGTAGCCAC	241	False	NA	NA	False	AATAAA	-24	NA	52095524	52095799	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_52095500_52095800
H1_mix_00029206	chr15	+	2068	3	FSM	ENSG00000259577.2	ENST00000559779.2	2131	3	55	8	26	-8	multi-exon	FALSE	canonical	1	1	junction_1	1	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCATGAATTCCTAAAAGTA	549	False	NA	NA	False	NA	NA	NA	52180053	52205955	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_52180402_52180549_52181203_52204888
H1_mix_00029207	chr15	+	854	4	Antisense	novelGene_ENSG00000259301.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_3	7.78888096369861	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCGTTATTTAATATGTT	NA	False	NA	NA	False	ATTAAA	-45	NA	53811911	53887307	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr15_+_53812011_53876877_53877059_53878173_53878299_53886858
H1_mix_00029208	chr15	+	3013	11	NIC	ENSG00000151575.14	novel	1433	13	NA	NA	0	53	intron_retention	FALSE	canonical	3	29	junction_5	9.32952303175248	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTAGATGTTTATGTGGC	11	True	NA	65	True	NA	NA	NA	56365445	56430175	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_56365671_56373440_56373505_56383951_56384032_56388471_56388521_56389317_56389401_56391242_56391419_56394164_56394248_56394660_56394835_56412301_56412437_56427604_56427740_56428366
H1_mix_00029210	chr15	+	4721	21	NIC	ENSG00000140262.18	novel	6114	21	NA	NA	0	-5	combination_of_known_splicesites	FALSE	canonical	3	12	junction_5	90.1911719626705	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAACACAGTAAAATAG	-2	True	NA	5	True	AATAAA	-13	NA	56918674	57288501	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_56918907_56919891_56919989_56921025_56921099_57063749_57063824_57072652_57072715_57091788_57091892_57166401_57166467_57192157_57192294_57197772_57197826_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57253261_57253469_57262093_57262209_57263111_57263275_57273029_57273263_57282444_57282599_57286156
H1_mix_00029212	chr15	+	5403	14	NNC	ENSG00000140262.18	novel	1809	14	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_8	116.194440181078	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACTCCCAGGATGATTCC	-5	True	NA	NA	False	AATAAA	-33	NA	57219427	57289849	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_57219591_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57252420_57252493_57253264_57253469_57262093_57262209_57263111_57263275_57273032_57273263_57282444_57282599_57286156
H1_mix_00029213	chr15	+	3888	13	NIC	ENSG00000140262.18	novel	3956	13	NA	NA	62	-3	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	98.3127097016906	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAACACAGTAAAATAGTG	95	False	NA	7	True	AATAAA	-15	NA	57219527	57288503	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_57219591_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57253261_57253469_57262093_57262209_57263111_57263275_57273032_57273263_57282444_57282599_57286156
H1_mix_00029215	chr15	+	7474	20	NNC	ENSG00000128849.11	novel	577	3	NA	NA	10892	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	72.8453756491282	29	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTCTCCTGTGATTG	1819	False	NA	24	True	AATAAA	-20	NA	57388037	57550717	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_57388228_57406972_57407103_57437984_57439602_57440376_57440472_57442372_57442479_57451499_57451602_57452140_57452290_57453682_57453819_57461679_57461893_57516779_57516987_57518392_57518498_57523488_57523642_57524580_57524752_57528653_57528816_57531689_57531780_57543695_57543780_57544472_57544598_57545591_57545701_57546075_57546240_57547351
H1_mix_00029216	chr15	+	1607	1	FSM	ENSG00000276772.1	ENST00000621477.1	1726	1	-132	251	-132	-251	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTCACAGTGACTCTGCT	NA	False	NA	NA	False	NA	NA	NA	57553822	57555429	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_57553800_57555400
H1_mix_00029217	chr15	+	4336	4	FSM	ENSG00000255529.9	ENST00000380557.4	3629	4	-594	-113	-564	110	multi-exon	FALSE	canonical	3	9	junction_1	117.450698876876	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTGATGAGTGCTTTGA	NA	False	NA	1	True	NA	NA	NA	57706130	57717667	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_57706956_57709184_57709359_57711983_57712189_57714535
H1_mix_00029218	chr15	+	582	1	FSM	ENSG00000261219.1	ENST00000567865.1	634	1	-106	158	-106	-158	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACTCAGAGGACCAGGTC	NA	False	NA	NA	False	AGTAAA	-12	NA	57720188	57720770	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_57720200_57720800
H1_mix_00029220	chr15	+	5278	14	FSM	ENSG00000157450.16	ENST00000559209.5	5278	14	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_8	33.6031486267751	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTGAATTGTTAATATAGG	246	False	NA	NA	False	AATAAA	-17	NA	58987951	59097054	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_58988069_59030803_59031703_59052304_59052432_59055681_59055846_59058355_59058551_59066763_59067084_59075953_59076216_59080935_59081285_59084101_59084255_59085658_59085786_59089666_59089760_59091058_59091155_59092536_59092641_59094782
H1_mix_00029221	chr15	+	4536	13	FSM	ENSG00000157450.16	ENST00000561186.5	4536	13	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	36.0435693139413	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCTTTGTGTTTCATA	NA	False	NA	11	True	AATAAA	-14	NA	59030822	59096424	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_59031703_59052304_59052432_59055681_59055846_59058355_59058551_59066763_59067084_59075953_59076216_59080935_59081285_59084101_59084255_59085658_59085786_59089666_59089760_59091058_59091155_59092512_59092641_59094782
H1_mix_00029226	chr15	+	242	1	FSM	ENSG00000259657.1	ENST00000558833.1	565	1	429	-106	429	106	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATTATGGATATAGTGCA	NA	False	NA	NA	False	NA	NA	NA	59677185	59677427	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_59677200_59677400
H1_mix_00029227	chr15	+	2871	2	FSM	ENSG00000171956.7	ENST00000396057.6	2871	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTAGTTTTGTGTGTTTTT	-2	True	NA	6	True	ATTAAA	-16	NA	60004310	60007444	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_60004644_60004906
H1_mix_00029228	chr15	+	11777	57	ISM	ENSG00000171914.17	ENST00000636159.2	12023	59	227835	0	-31614	0	3prime_fragment	TRUE	canonical	1	17	junction_1	25.6740757042061	301	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTGGAGGACTCATGG	NA	False	NA	13	True	AATAAA	-17	NA	62618384	62844631	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_62618476_62647274_62647447_62650083_62650182_62652004_62652135_62653161_62653315_62655943_62656087_62657770_62657899_62673826_62673891_62675216_62675322_62686640_62686797_62692839_62692942_62694315_62694393_62697687_62697869_62698753_62698868_62701105_62701215_62701991_62702201_62702765_62702865_62707085_62707254_62708501_62708797_62711910_62712078_62716330_62716460_62717575_62717690_62719766_62719881_62722352_62722488_62724975_62725105_62727086_62727190_62736877_62737087_62738213_62738334_62739347_62739546_62740629_62740770_62748350_62748445_62750401_62750492_62752304_62752428_62753772_62753917_62755531_62755694_62761680_62761822_62762271_62762454_62763562_62763696_62766320_62766423_62770963_62771135_62776763_62776911_62781139_62781242_62783770_62783891_62792640_62792788_62796126_62796294_62797218_62797403_62800367_62800494_62800652_62800770_62805599_62805786_62809924_62810033_62819515_62819622_62820485_62820611_62833503_62833630_62835736_62835800_62835890_62836074_62838855_62838982_62840481
H1_mix_00029231	chr15	+	1099	9	NIC	ENSG00000140416.23	novel	1295	10	NA	NA	9	-3	combination_of_known_junctions	FALSE	canonical	3	189	junction_8	571.324215638546	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTATTTCTGTTTGCTATT	9	False	NA	21	True	AATAAA	-10	NA	63042695	63066088	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575_63062646_63065895
H1_mix_00029233	chr15	+	573	8	FSM	ENSG00000140416.23	ENST00000559831.5	573	8	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_5	746.659690808035	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAGGTCAGTAACTAAAT	74	False	NA	NA	False	AATAAA	-33	NA	63044140	63062598	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63061712_63061789_63062214_63062278_63062575
H1_mix_00029238	chr15	+	4054	5	FSM	ENSG00000138613.14	ENST00000380343.8	685	5	-46	-3323	-41	-2	multi-exon	FALSE	canonical	3	32	junction_3	42.9825546006749	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTCCTGTGTTTCCTGTT	5	True	NA	18	True	AATAAA	-20	NA	63277563	63309124	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_63277737_63279160_63279332_63286557_63286629_63302344_63302473_63305613
H1_mix_00029239	chr15	+	402	2	FSM	ENSG00000138613.14	ENST00000558631.1	515	2	92	21	57	-21	multi-exon	FALSE	canonical	3	109	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGTTGCCGCCATGCT	1236	False	NA	NA	False	NA	NA	NA	63287272	63302472	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_63287547_63302344
H1_mix_00029243	chr15	+	1849	14	FSM	ENSG00000028528.15	ENST00000560829.5	1869	14	20	0	20	0	multi-exon	FALSE	canonical	0	0	junction_1	176.237870454249	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACATGACTCAGAATGTTG	69	False	NA	32	True	AATAAA	-17	NA	64094142	64138006	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_64094336_64112572_64112685_64118116_64118245_64118787_64118855_64123502_64123547_64127173_64127253_64127730_64127807_64129915_64130030_64130227_64130322_64131686_64131893_64134663_64134808_64136329_64136411_64136860_64136933_64137567
H1_mix_00029245	chr15	+	3367	3	FSM	ENSG00000157734.14	ENST00000560997.1	3367	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGACGCGTCTGTCCACG	1723	False	NA	20	True	AATAAA	-17	NA	64153479	64157480	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_64153685_64153934_64154003_64154386
H1_mix_00029246	chr15	+	586	4	FSM	ENSG00000103671.10	ENST00000557834.5	586	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	79.4019311268099	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCATCAATAACTGTCTG	-11	True	NA	NA	False	NA	NA	NA	64387835	64397735	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_64388049_64394006_64394116_64395397_64395532_64397605
H1_mix_00029249	chr15	+	519	1	FSM	ENSG00000243403.1	ENST00000483963.1	348	1	-101	-70	-101	70	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATAAATAAAAATAATGT	NA	False	NA	NA	False	AATAAA	-19	NA	64592877	64593396	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_64592900_64593400
H1_mix_00029250	chr15	+	3101	15	FSM	ENSG00000166839.17	ENST00000319580.13	3101	15	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_14	11.1080041007393	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTCAAATCCAGTACTCA	3	True	NA	NA	False	AATAAA	-20	NA	64911901	64958691	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_64911965_64915796_64915901_64917385_64917515_64921920_64922020_64926065_64926171_64926900_64927000_64930821_64930921_64931486_64931586_64934135_64934235_64942466_64942566_64943483_64943583_64944651_64944748_64947403_64947594_64949840_64949973_64957102
H1_mix_00029251	chr15	+	1518	12	FSM	ENSG00000166839.17	ENST00000395720.2	1518	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	9.36937158868951	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTATTTCTTCTTCTT	5581	False	NA	NA	False	NA	NA	NA	64921926	64951261	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_64922020_64926065_64926171_64926900_64927000_64930821_64930921_64931486_64931586_64934135_64934235_64942466_64942566_64943483_64943583_64944651_64944748_64947403_64947594_64949840_64949973_64950953
H1_mix_00029252	chr15	+	4242	8	FSM	ENSG00000074621.14	ENST00000434116.6	5474	8	62	1170	23	1151	multi-exon	FALSE	canonical	2	5	junction_3	2.06031501455085	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTGAACAGCAGGAACG	48	False	NA	NA	False	NA	NA	NA	65611427	65651759	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_65612614_65618879_65618981_65623954_65625971_65639594_65639704_65644426_65644514_65645611_65645704_65650381_65650943_65651669
H1_mix_00029253	chr15	+	3323	8	FSM	ENSG00000074621.14	ENST00000399033.8	3323	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	3.23879544250132	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAAGACCATGCAGAAGT	1966	False	NA	NA	False	NA	NA	NA	65623998	65654110	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_65625971_65638127_65638182_65639594_65639704_65644426_65644514_65645611_65645704_65650381_65650943_65652641_65652809_65653829
H1_mix_00029259	chr15	+	2086	2	NIC	ENSG00000166938.13	novel	3763	17	NA	NA	2440	0	intron_retention	FALSE	canonical	3	181	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGTCTCCAATCAGTTCT	NA	False	NA	21	True	AATAAA	-18	NA	66331719	66333898	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_66332911_66333003
H1_mix_00029260	chr15	+	2206	18	FSM	ENSG00000174442.12	ENST00000535141.6	2206	18	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_1	138.421676603172	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAGAAAAGGGAGGAAGAT	5359	False	NA	NA	False	AAAACA	-22	NA	66504958	66548426	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_66505392_66513987_66514084_66515525_66515645_66518878_66519079_66520589_66520661_66521049_66521206_66523676_66523749_66527289_66527384_66527856_66527913_66528851_66528958_66529493_66529574_66532246_66532404_66532984_66533014_66535932_66536070_66537167_66537264_66540097_66540211_66546590_66546706_66548350
H1_mix_00029262	chr15	+	7392	4	NNC	ENSG00000137834.15	novel	3828	4	NA	NA	238	675	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	88.458402025409	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTTTTAAACTGTCTTC	88	False	NA	11	True	AATAAA	-15	NA	66702473	66781988	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_66708739_66711667_66711725_66716420_66716499_66780996
H1_mix_00029264	chr15	+	573	4	FSM	ENSG00000137834.15	ENST00000559931.5	573	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	111.96527239382	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGGTCGTGCGCAAGGT	3222	False	NA	NA	False	NA	NA	NA	66711675	66781313	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_66711725_66716420_66716499_66717011_66717141_66780996
H1_mix_00029265	chr15	+	530	5	FSM	ENSG00000166949.17	ENST00000558827.1	552	5	22	0	22	0	multi-exon	FALSE	canonical	1	2	junction_1	23.5212669726782	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGACAGCGCTATTTTTG	20	False	NA	NA	False	NA	NA	NA	67166552	67184778	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_67166692_67166778_67166854_67170553_67170605_67181240_67181454_67184726
H1_mix_00029266	chr15	+	3110	12	FSM	ENSG00000103599.20	ENST00000546225.5	3112	12	0	2	0	-2	multi-exon	FALSE	canonical	2	7	junction_4	5.01567789968499	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTTTTGTTTTGCTATA	NA	False	NA	5	True	AATAAA	-18	NA	67372113	67501801	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_67372663_67373366_67373434_67384935_67385020_67388830_67389007_67400113_67400306_67416930_67417052_67421290_67421578_67465126_67465298_67475695_67475819_67490002_67490065_67494257_67494367_67500632
H1_mix_00029267	chr15	+	1675	22	FSM	ENSG00000137764.20	ENST00000354498.9	1783	22	108	0	108	0	multi-exon	FALSE	canonical	0	0	junction_1	18.6008314251061	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCCTCTGCCATAAGAGT	11	True	NA	17	True	AATAAA	-18	NA	67549105	67807111	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_67549208_67550033_67550083_67563282_67563351_67580753_67580824_67585889_67585931_67586845_67586914_67592925_67592975_67600684_67600750_67630887_67630928_67646230_67646300_67646387_67646470_67658552_67658615_67664596_67664646_67692478_67692553_67693517_67693569_67703336_67703409_67727915_67727946_67748230_67748258_67748568_67748602_67769601_67769664_67772706_67772753_67806645
H1_mix_00029269	chr15	+	3578	23	NIC	ENSG00000137807.16	novel	3660	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	31	junction_21	122.235310260089	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTTGTGTGATGGCTGT	11	True	NA	NA	False	ATTAAA	-21	NA	69414348	69448425	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_69414477_69415993_69416064_69417382_69417512_69421646_69421753_69421991_69422129_69422325_69422436_69423158_69423330_69425281_69425324_69426069_69426183_69426335_69426458_69429110_69429214_69435482_69435563_69435651_69435772_69436137_69436262_69436563_69436723_69438247_69438406_69439903_69440078_69440307_69440488_69440767_69441080_69444789_69445042_69446008_69446092_69446870_69446942_69447791
H1_mix_00029270	chr15	+	3616	23	NNC	ENSG00000137807.16	novel	3660	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	102.319262140414	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTTGTGTGATGGCTGT	11	True	NA	NA	False	ATTAAA	-21	NA	69414348	69448425	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_69414477_69415993_69416064_69417382_69417512_69421646_69421753_69421991_69422129_69422325_69422436_69423158_69423330_69426069_69426183_69426335_69426458_69429110_69429214_69435482_69435563_69435651_69435772_69436137_69436262_69436563_69436723_69438247_69438406_69439903_69440076_69440307_69440488_69440767_69441080_69444789_69445042_69446008_69446092_69446282_69446365_69446870_69446942_69447791
H1_mix_00029273	chr15	+	705	5	NNC	ENSG00000137818.12	novel	1174	4	NA	NA	-157	5118	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	10074.9323819071	1449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACGTGTAATTACGTCCA	-1	True	NA	NA	False	AAAAAG	-22	NA	69452656	69461323	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_69453021_69453646_69453722_69455169_69455288_69455427_69455547_69461294
H1_mix_00029274	chr15	+	940	3	FSM	ENSG00000137818.12	ENST00000488122.2	940	3	0	0	0	0	multi-exon	FALSE	canonical	3	20717	junction_2	2017	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTGGTCTTGTCCAT	72	False	NA	50	True	AATAAA	-14	NA	69453018	69455546	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_69453722_69455169_69455288_69455427
H1_mix_00029276	chr15	+	1344	7	ISM	ENSG00000187720.15	ENST00000261862.8	9373	18	115	371560	-79	196585	5prime_fragment	FALSE	canonical	1	6	junction_6	4.04145188432738	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGCCCCCGAACTGGG	119	False	NA	NA	False	NA	NA	NA	71115585	71411823	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_71115699_71141448_71141557_71154862_71154933_71215034_71215400_71242648_71243097_71256612_71256716_71411686
H1_mix_00029278	chr15	+	2469	15	FSM	ENSG00000140463.14	ENST00000395205.6	2450	15	-19	0	-19	0	multi-exon	FALSE	canonical	3	16	junction_5	110.674670331839	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACGGTCTTCCCTTACCT	NA	False	NA	17	True	AATAAA	-19	NA	72686159	72738475	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_72686252_72709699_72709780_72712243_72712308_72715290_72715403_72716777_72716851_72722788_72722848_72724527_72724656_72727939_72727995_72729615_72729685_72731304_72731458_72731554_72731727_72735112_72735183_72735824_72735967_72736761_72736964_72737477
H1_mix_00029284	chr15	+	7144	28	NIC	ENSG00000067141.17	novel	4441	28	NA	NA	-124	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_7	26.4486976556835	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAAACTCTGGTCTGGTC	-7	True	NA	17	True	AATACA	-13	NA	73052338	73305198	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_73052806_73116539_73116858_73122524_73122801_73126416_73126571_73135890_73136028_73176402_73176558_73178306_73178428_73236346_73236507_73244343_73244499_73249059_73249209_73249582_73249722_73253399_73253450_73254681_73254830_73258765_73258877_73260270_73260466_73266315_73266412_73270057_73270234_73270315_73270455_73272454_73272563_73273810_73274006_73278130_73278200_73282963_73283112_73288312_73288552_73289145_73289239_73293389_73293549_73298347_73298612_73301320_73301458_73302612
H1_mix_00029291	chr15	+	3010	8	FSM	ENSG00000140464.20	ENST00000436891.7	3010	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	48.8671668914825	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGCGAACCCTTATTCC	8	True	NA	18	True	AATAAA	-18	NA	73994743	74036394	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74032571_74032716_74033155_74033423_74034477_74034531_74035171
H1_mix_00029292	chr15	+	3643	7	FSM	ENSG00000140464.20	ENST00000435786.6	3643	7	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_5	28.6860399652669	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGCGAACCCTTATTCC	8	True	NA	18	True	AATAAA	-18	NA	73994743	74036394	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74032571_74032716_74033155_74033415_74034477
H1_mix_00029293	chr15	+	490	1	FSM	ENSG00000260266.1	ENST00000569235.1	490	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAAGTTTGACTTGTGTT	1918	False	NA	NA	False	NA	NA	NA	74361551	74362041	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_74361600_74362000
H1_mix_00029294	chr15	+	1272	3	FSM	ENSG00000247240.9	ENST00000659591.2	1300	3	24	4	-12	-1	multi-exon	FALSE	canonical	3	10	junction_1	14.5	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCCCTGTCATGGTCAT	-15	True	NA	15	True	AATAAA	-20	NA	74461285	74481290	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_74462099_74479059_74479279_74481050
H1_mix_00029295	chr15	+	1657	1	Genic_Genomic	ENSG00000247240.9	novel	NA	NA	NA	NA	50905	335	mono-exon	FALSE	NA	NA	NA	NA	NA	466	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACATAGTAGAATATGTGT	NA	False	NA	4	True	AATAAA	-17	NA	74512314	74513971	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr15_+_74512300_74514000
H1_mix_00029304	chr15	+	2795	1	FSM	ENSG00000178802.18	ENST00000566556.1	2795	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGGGGTAATGAGCACT	5385	False	NA	18	True	ATTAAA	-17	NA	74895433	74898228	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_74895400_74898200
H1_mix_00029305	chr15	+	885	1	FSM	ENSG00000167173.19	ENST00000565074.1	3152	1	2545	-278	2545	278	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTGACCAGAATCCCTG	1260	False	NA	NA	False	NA	NA	NA	75208988	75209873	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_75209000_75209900
H1_mix_00029308	chr15	+	923	7	NIC	ENSG00000140365.16	novel	895	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	294.045347976578	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGAAGTATAAAGGAATGT	0	True	NA	NA	False	NA	NA	NA	75336083	75340256	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_75336231_75338354_75338421_75338645_75338686_75338984_75339105_75339263_75339345_75339701_75339879_75339964
H1_mix_00029311	chr15	+	1177	3	FSM	ENSG00000140365.16	ENST00000565834.1	1671	3	494	0	1	0	multi-exon	FALSE	canonical	3	838	junction_2	21.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTCTGGCCTCCCAGATC	2471	False	NA	NA	False	NA	NA	NA	75338554	75340116	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_75338686_75338984_75339879_75339964
H1_mix_00029322	chr15	+	2292	11	FSM	ENSG00000169758.13	ENST00000484722.5	2292	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	1.6	199	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCCAGTTGGTGGAGGTT	3	True	NA	6	True	AATAAA	-17	NA	76059957	76204962	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_76060017_76134167_76134302_76137706_76137896_76156603_76156653_76160094_76160169_76169815_76169873_76170992_76171132_76175558_76175675_76191967_76192158_76202201_76202265_76203740
H1_mix_00029323	chr15	+	1800	6	FSM	ENSG00000159556.10	ENST00000290759.9	1831	6	17	14	17	-14	multi-exon	FALSE	canonical	1	2	junction_1	1.01980390271856	906	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATAACCCGGGGCGACG	-7	True	NA	-10	True	AATAAA	-2	NA	76336789	76342461	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_76336942_76337777_76337968_76338251_76338515_76340275_76340560_76341133_76341302_76341718
H1_mix_00029324	chr15	+	1052	10	FSM	ENSG00000140368.13	ENST00000557995.1	1052	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	4.5242829047783	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGTGCGTTCTGTTCTCC	NA	False	NA	-6	True	NA	NA	NA	77028342	77037313	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_77028424_77028553_77028653_77029528_77029575_77030501_77030582_77031179_77031279_77032297_77032395_77032861_77032953_77035507_77035564_77035801_77035936_77037044
H1_mix_00029325	chr15	+	431	2	FSM	ENSG00000140368.13	ENST00000560064.1	530	2	83	16	83	3	multi-exon	FALSE	canonical	3	10	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGCGTTCTGTTCTCCTTG	NA	False	NA	-3	True	AATAAA	-3	NA	77035776	77037316	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_77035936_77037044
H1_mix_00029326	chr15	+	1655	9	ISM	ENSG00000140382.15	ENST00000336216.9	3805	10	-201	5999	13	0	5prime_fragment	FALSE	canonical	3	267	junction_6	38.6795730974374	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGTTTTTTCTTATGCTT	-25	True	NA	14	True	AATAAA	-16	NA	77420686	77479604	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_77421005_77458403_77458497_77464239_77464388_77467094_77467308_77470909_77471043_77471782_77471815_77477554_77477631_77478294_77478511_77479178
H1_mix_00029328	chr15	+	886	9	FSM	ENSG00000166411.14	ENST00000558933.5	878	9	-8	0	-8	0	multi-exon	FALSE	canonical	3	14	junction_3	79.8669792530054	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCCTGCTCAGTGCCGT	NA	False	NA	NA	False	NA	NA	NA	78149317	78166200	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_78149431_78155212_78155276_78157547_78157632_78161580_78161769_78162233_78162368_78163506_78163610_78163715_78163781_78164991_78165077_78166149
H1_mix_00029331	chr15	+	2485	8	FSM	ENSG00000166411.14	ENST00000558535.1	2586	8	101	0	101	0	multi-exon	FALSE	canonical	3	239	junction_3	17.6380849532007	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTGCTTTCTCTACCT	NA	False	NA	28	True	AATAAA	-16	NA	78160070	78170542	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_78160207_78161580_78161769_78162233_78162368_78163506_78163610_78163715_78163781_78164991_78165077_78166149_78166303_78168921
H1_mix_00029332	chr15	+	315	3	FSM	ENSG00000140403.13	ENST00000489435.2	947	3	135	497	135	-497	multi-exon	FALSE	canonical	1	2	junction_1	0.5	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACACACAGTTGATCATAA	81	False	NA	NA	False	NA	NA	NA	78264279	78265542	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_78264394_78264756_78264896_78265480
H1_mix_00029333	chr15	+	3031	8	FSM	ENSG00000140403.13	ENST00000394855.7	3245	8	194	20	135	-15	multi-exon	FALSE	canonical	1	2	junction_1	4.32364170012044	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCTGGTATGAGAGATAA	81	False	NA	-7	True	ATTAAA	-3	NA	78264279	78282176	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_78264394_78264756_78264896_78270496_78270678_78273094_78273200_78274196_78274425_78275497_78275729_78280044_78280146_78280244
H1_mix_00029336	chr15	+	2599	15	ISM	ENSG00000136381.13	ENST00000258886.13	6324	22	0	12591	0	106	intron_retention	FALSE	canonical	3	152	junction_6	19.8582990413662	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTATTTTGAATACAGTT	-19	True	NA	NA	False	AATAAA	-11	NA	78438215	78488862	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_78438357_78439794_78439882_78462921_78463088_78465250_78465389_78466270_78466490_78470531_78470602_78471740_78471925_78473241_78473382_78476187_78476360_78478296_78478398_78483317_78483435_78484760_78484921_78485704_78485841_78487732_78487818_78488179
H1_mix_00029337	chr15	+	4055	8	FSM	ENSG00000136381.13	ENST00000560440.5	4396	8	0	341	0	-341	multi-exon	FALSE	canonical	3	152	junction_6	21.6380239770792	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAGAAGATAAAAGATCAC	-9	True	NA	NA	False	ATTAAA	-18	NA	78438283	78476359	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_78438357_78439794_78439882_78462921_78463088_78465250_78465389_78466270_78466490_78470531_78470602_78471740_78471925_78473241
H1_mix_00029343	chr15	+	757	8	FSM	ENSG00000041357.16	ENST00000559437.5	756	8	0	-1	0	1	multi-exon	FALSE	canonical	0	0	junction_1	1356.76493986277	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAATTCATATCCTCTCCT	40	True	NA	NA	False	AGTAAA	-16	NA	78540846	78546697	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_78540951_78541904_78541931_78542176_78542220_78542482_78542646_78544189_78544268_78544868_78544958_78545633_78545765_78546574
H1_mix_00029346	chr15	+	3686	5	ISM	ENSG00000169684.13	ENST00000559554.5	1051	6	-64	671	-13	-410	5prime_fragment	FALSE	canonical	3	138	junction_4	20.8026440627147	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTGATGTGTAAATGAACA	7	False	NA	NA	False	AATAAA	-15	NA	78565506	78592864	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_78565826_78580810_78580963_78586644_78586690_78588313_78588424_78589804
H1_mix_00029348	chr15	+	2494	5	FSM	ENSG00000185787.15	ENST00000559619.5	448	5	-162	-1884	9	1884	multi-exon	FALSE	canonical	3	7759	junction_3	310.581209186905	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTCAGATTCCAGACTTT	-18	True	NA	NA	False	NA	NA	NA	78872824	78889327	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_78873058_78878212_78878260_78880511_78880580_78886140_78886228_78887268
H1_mix_00029354	chr15	+	1486	4	FSM	ENSG00000166557.14	ENST00000543455.1	1483	4	-3	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	227.288851953241	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGGAGACTTGTGCCTT	-7	True	NA	14	True	AATAAA	-15	NA	79311155	79322837	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_79311418_79313756_79314006_79314540_79314656_79321977
H1_mix_00029356	chr15	+	1659	7	FSM	ENSG00000086666.19	ENST00000618205.4	1659	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	872.724660665283	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACTTTTTCTCTTATTCT	41	False	NA	24	True	AATAAA	-26	NA	80060159	80138392	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_80060248_80098415_80098579_80120327_80120499_80121711_80121821_80122699_80122801_80131179_80131294_80137479
H1_mix_00029357	chr15	+	968	6	FSM	ENSG00000086666.19	ENST00000558997.5	741	6	-4	-223	-4	0	multi-exon	FALSE	canonical	2	5	junction_1	920.086865464343	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTATTAGACAAATAAGGT	2561	False	NA	NA	False	AAAAAG	-22	NA	80075156	80131517	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_80075243_80098415_80098579_80120327_80120499_80121711_80121821_80122699_80122801_80131179
H1_mix_00029360	chr15	+	2067	5	FSM	ENSG00000103876.14	ENST00000558767.6	2124	5	63	-6	2	6	multi-exon	FALSE	canonical	3	112	junction_1	11.5108644332213	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTCACTTTCATGCATCT	57	False	NA	NA	False	ATTAAA	-25	NA	80152856	80163750	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_80153136_80158059_80158171_80159755_80159878_80160409_80160460_80162245
H1_mix_00029366	chr15	+	420	3	FSM	ENSG00000188659.10	ENST00000566861.5	404	3	-16	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTATGTAGCTCTCTTCT	4	True	NA	8	True	AATAAA	-19	NA	82262809	82264889	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_82262933_82263358_82263439_82264672
H1_mix_00029374	chr15	+	1764	10	FSM	ENSG00000136404.16	ENST00000379384.9	1808	10	44	0	9	0	multi-exon	FALSE	canonical	1	1	junction_4	7.004407783322	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTTTTATTGGTGGCTG	38	False	NA	NA	False	AATGAA	-2	NA	83107691	83137281	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_83107773_83112796_83112901_83115844_83115943_83119577_83119735_83121920_83122004_83122756_83122879_83124671_83124777_83126754_83126848_83127357_83127478_83136480
H1_mix_00029381	chr15	+	1146	5	NIC	ENSG00000176371.14	novel	910	4	NA	NA	7	-3	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	35.5176012703561	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCCTGAGTCTGTCTTT	9	True	NA	24	True	AATAAA	-14	NA	84601029	84623713	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_84601189_84603819_84604334_84620601_84620773_84622645_84622715_84623480
H1_mix_00029400	chr15	+	5039	2	FSM	ENSG00000181026.15	ENST00000557927.1	5039	2	0	0	0	0	multi-exon	FALSE	canonical	3	616	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAAGTGGCCCTTCCTGT	482	False	NA	28	True	AATAAA	-18	NA	88626611	88632281	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_88629427_88630057
H1_mix_00029411	chr15	+	4663	24	FSM	ENSG00000140525.19	ENST00000566895.5	4663	24	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_9	73.3086800514678	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTCTGTGGTTGAAGT	NA	False	NA	13	True	AATAAA	-13	NA	89278686	89317128	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_89278775_89281169_89281301_89281764_89283251_89285095_89285219_89290212_89290282_89291612_89291715_89292687_89292865_89292941_89293064_89293832_89293998_89294914_89295095_89299799_89299967_89300299_89300386_89301325_89301443_89303863_89303916_89305114_89305243_89305340_89305410_89305604_89305699_89306006_89306195_89307475_89307530_89307612_89307673_89312903_89312973_89314611_89314708_89315281_89315390_89316396
H1_mix_00029413	chr15	+	4083	4	FSM	ENSG00000140525.19	ENST00000676110.1	4083	4	0	0	0	0	multi-exon	FALSE	canonical	3	599	junction_3	38.3782345723313	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTGTTTTCTTTTTATA	NA	False	NA	-2	True	NA	NA	NA	89309671	89316974	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_89312973_89314611_89314708_89315281_89315390_89316396
H1_mix_00029443	chr15	+	986	2	FSM	ENSG00000166965.13	ENST00000554302.1	986	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCAGGTGGAGGCCGCTTG	9	False	NA	NA	False	NA	NA	NA	90955392	90957106	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_90955884_90956611
H1_mix_00029457	chr15	+	1473	2	Intergenic	novelGene_495	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	292	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGTGGAATGTCATCAGTTA	NA	False	NA	NA	False	NA	NA	NA	96875930	96877529	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_96876462_96876587
H1_mix_00029458	chr15	+	2280	10	FSM	ENSG00000140443.15	ENST00000559925.5	2280	10	0	0	0	0	multi-exon	FALSE	canonical	3	783	junction_6	64.0262291931311	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTAAGTCAGCAGCTGGG	32	False	NA	NA	False	NA	NA	NA	98649581	98916955	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_98649676_98707561_98708108_98891324_98891638_98896756_98896906_98899476_98899622_98908684_98908900_98911314_98911442_98913043_98913283_98915963_98916132_98916671
H1_mix_00029465	chr15	+	1347	8	ISM	ENSG00000068305.18	ENST00000557785.5	2854	11	-4	23218	-4	19002	5prime_fragment	FALSE	canonical	3	114	junction_1	23.5606035749581	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTTGAAGAGACAAGTCT	-19	True	NA	10	True	AATAAA	-19	NA	99565975	99690564	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_99566105_99598429_99598512_99632977_99633174_99645560_99645765_99671322_99671455_99674392_99674613_99675398_99675459_99690240
H1_mix_00029466	chr15	+	2841	12	NIC	ENSG00000068305.18	novel	5580	12	NA	NA	-4	-9	combination_of_known_junctions	FALSE	canonical	3	6	junction_11	46.5271625988963	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATCAAATGGTGAAGACA	-19	True	NA	12	True	AATAAA	-16	NA	99565975	99716397	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_99566105_99598429_99598512_99632977_99633174_99645560_99645765_99671322_99671455_99674392_99674613_99675398_99675459_99690240_99690429_99706728_99706856_99710633_99710761_99712389_99712836_99715467
H1_mix_00029467	chr15	+	3044	12	NIC	ENSG00000068305.18	novel	5580	12	NA	NA	-4	-9	combination_of_known_junctions	FALSE	canonical	3	6	junction_11	50.5894184212306	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATCAAATGGTGAAGACA	-19	True	NA	12	True	AATAAA	-16	NA	99565975	99716397	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_99566105_99598429_99598512_99632977_99633174_99645560_99645765_99671322_99671658_99674392_99674613_99675398_99675459_99690240_99690429_99706728_99706856_99710633_99710761_99712389_99712836_99715467
H1_mix_00029470	chr15	-	4223	27	NNC	ENSG00000180229.12	novel	4383	27	NA	NA	28	1558	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	82.327648551239	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTGTCTAATAATACATT	759	False	NA	NA	False	ATTAAA	-36	NA	20505434	20377936	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_20378196_20383290_20383457_20407571_20407618_20431092_20431236_20435848_20435993_20437293_20437433_20438591_20438823_20438926_20439124_20439507_20439656_20440473_20440643_20443370_20443522_20444226_20444420_20445858_20446047_20452367_20452560_20453350_20453503_20453619_20453763_20453839_20454011_20454539_20454674_20457304_20457501_20457592_20457721_20457826_20457960_20458232_20458448_20461191_20461343_20462342_20462447_20462830_20463002_20483402_20483518_20505390
H1_mix_00029471	chr15	-	4351	27	FSM	ENSG00000180229.12	ENST00000428453.5	4383	27	32	0	32	0	multi-exon	FALSE	canonical	3	36	junction_1	71.4549657489073	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATCTTCTGATTCCTTT	64	False	NA	NA	False	AATAAA	-19	NA	20506129	20383114	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_20383457_20431092_20431236_20435848_20435993_20437293_20437433_20438591_20438823_20438926_20439124_20439507_20439656_20440473_20440643_20443370_20443522_20444226_20444420_20445858_20446047_20452367_20452560_20453350_20453503_20453619_20453763_20453839_20454011_20454539_20454674_20457304_20457501_20457592_20457721_20457826_20457960_20458232_20458448_20461191_20461343_20462342_20462447_20462830_20463002_20466194_20466371_20483402_20483518_20505390_20505494_20506107
H1_mix_00029472	chr15	-	3956	25	ISM	ENSG00000180229.12	ENST00000428453.5	4383	27	699	47978	0	0	internal_fragment	FALSE	canonical	3	44	junction_4	70.1557295513979	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAGCCATGCAGCCTTGA	731	False	NA	NA	False	GATAAA	-13	NA	20505462	20431092	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_20431236_20435848_20435993_20437293_20437433_20438591_20438823_20438926_20439124_20439507_20439656_20440473_20440643_20443370_20443522_20444226_20444420_20445858_20446047_20452367_20452560_20453350_20453503_20453619_20453763_20453839_20454011_20454539_20454674_20457304_20457501_20457592_20457721_20457826_20457960_20458232_20458448_20461191_20461343_20462342_20462447_20462830_20463002_20466194_20466371_20483402_20483518_20505390
H1_mix_00029473	chr15	-	4088	26	FSM	ENSG00000180229.12	ENST00000429257.5	4088	26	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_24	73.9520493292782	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAGCCATGCAGCCTTGA	731	False	NA	NA	False	GATAAA	-13	NA	20505462	20431092	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_20431236_20435848_20435993_20437293_20437433_20438591_20438823_20438926_20439124_20439507_20439656_20440473_20440643_20443370_20443522_20444226_20444420_20445858_20446047_20452367_20452560_20453350_20453503_20453619_20453763_20453839_20454011_20454539_20454674_20457304_20457501_20457592_20457721_20457826_20457960_20458232_20458448_20461191_20461343_20462342_20462447_20462830_20463002_20466194_20466371_20476924_20477057_20483402_20483518_20505390
H1_mix_00029476	chr15	-	711	1	FSM	ENSG00000274499.1	ENST00000622705.1	1090	1	154	225	154	-225	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCAGAAGCTACATAGGCA	NA	False	NA	NA	False	NA	NA	NA	20804649	20803938	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_20803900_20804600
H1_mix_00029477	chr15	-	378	1	FSM	ENSG00000258712.2	ENST00000556905.2	1089	1	472	239	472	-239	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACGTCCACTGCCAGAAG	NA	False	NA	NA	False	NA	NA	NA	21373409	21373031	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_21373000_21373400
H1_mix_00029481	chr15	-	1440	8	NNC	ENSG00000275835.5	novel	3342	22	NA	NA	57	7500	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	32.892527530534	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTCCTTTTGATTATT	NA	False	NA	0	True	AATAAA	-15	NA	23008740	22991676	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_22992374_23000568_23000670_23003064_23003154_23004101_23004228_23005431_23005611_23006051_23006173_23006267_23006353_23008698
H1_mix_00029482	chr15	-	4476	22	FSM	ENSG00000275835.5	ENST00000620435.4	3342	22	0	-1134	0	27	multi-exon	FALSE	canonical	3	77	junction_4	14.8719401281273	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTCACAGAAGCTTTTTAT	0	True	NA	26	True	ATTAAA	-41	NA	23039572	22999149	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_23000670_23003064_23003154_23004101_23004228_23005431_23005611_23006051_23006173_23006267_23006353_23008698_23008882_23009944_23010134_23011132_23011332_23017772_23018042_23019218_23019335_23021958_23022162_23023946_23024194_23024736_23024831_23026115_23026206_23027191_23027307_23030884_23031021_23031949_23032030_23032727_23032825_23036896_23037006_23037098_23037153_23039397
H1_mix_00029483	chr15	-	532	2	FSM	ENSG00000275835.5	ENST00000620238.1	532	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGGCAGGCCTGGGCAC	NA	False	NA	NA	False	NA	NA	NA	23004570	23003090	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_23003154_23004101
H1_mix_00029484	chr15	-	338	1	FSM	ENSG00000279735.2	ENST00000638703.1	417	1	53	26	53	-26	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATCCAAAGTGGACCCCA	NA	False	NA	NA	False	NA	NA	NA	25092324	25091986	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_25092000_25092300
H1_mix_00029485	chr15	-	5017	12	NNC	ENSG00000114062.22	novel	8728	13	NA	NA	0	71251	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	153.376595885061	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGATTCTGCTTTTTCTT	20	True	NA	NA	False	NA	NA	NA	25438994	25262476	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_25262503_25337250_25339258_25340084_25340229_25354352_25354427_25354527_25354684_25355891_25356057_25356690_25356897_25360382_25360528_25370565_25371813_25375464_25375764_25405460_25405503_25438488
H1_mix_00029486	chr15	-	9352	10	FSM	ENSG00000114062.22	ENST00000635914.1	9352	10	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_9	87.9368460253658	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTGCTAGTATTTTG	9	True	NA	1	True	CATAAA	-21	NA	25439005	25333727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_25340229_25354352_25354427_25354527_25354684_25355891_25356057_25356690_25356897_25360382_25360528_25370565_25371813_25375464_25375764_25405460_25405503_25438488
H1_mix_00029491	chr15	-	6526	21	FSM	ENSG00000206190.13	ENST00000555815.7	5360	21	-3	-1163	-3	-276	multi-exon	FALSE	canonical	1	2	junction_7	5.65574928722977	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTAGACGCATATTTACCT	8	True	NA	NA	False	NA	NA	NA	25863330	25677548	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_25679975_25680120_25680309_25680809_25680915_25680993_25681075_25683285_25683487_25687702_25687829_25691714_25691792_25694818_25695147_25701915_25702101_25707975_25708103_25708196_25708301_25713673_25714242_25716729_25716925_25718181_25718400_25721656_25721910_25723890_25724022_25725950_25726083_25727159_25727267_25736055_25736142_25781018_25781224_25862647
H1_mix_00029492	chr15	-	5876	10	FSM	ENSG00000166206.15	ENST00000622697.4	5876	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	430.531712601471	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGAAGACTGATTTTT	-15	True	NA	-7	True	ATTAAA	-18	NA	26773076	26543548	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_26548135_26560931_26561177_26567580_26567734_26580318_26580457_26583331_26583415_26621313_26621535_26642432_26642529_26772401_26772470_26772680_26772773_26772882
H1_mix_00029493	chr15	-	817	7	FSM	ENSG00000166206.15	ENST00000554556.5	817	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	386.354615462128	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGTGTTCCTGGCCCTT	4	True	NA	NA	False	NA	NA	NA	26773057	26561068	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_26561177_26567580_26567734_26580318_26580457_26583331_26583415_26772401_26772470_26772680_26772773_26772882
H1_mix_00029494	chr15	-	518	3	FSM	ENSG00000166206.15	ENST00000557765.1	560	3	42	0	42	0	multi-exon	FALSE	canonical	3	1031	junction_2	33.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCAAAATCCCCTATGTC	NA	False	NA	NA	False	NA	NA	NA	26580629	26561122	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_26561177_26567580_26567734_26580318
H1_mix_00029497	chr15	-	1438	2	FSM	ENSG00000128731.18	ENST00000568206.1	2018	2	580	0	-290	0	multi-exon	FALSE	canonical	3	213	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	28117841	28115280	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_28115542_28116664
H1_mix_00029498	chr15	-	3513	10	FSM	ENSG00000128731.18	ENST00000567869.1	3523	10	0	10	0	-10	multi-exon	FALSE	canonical	3	57	junction_7	7.97372227467073	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CGTCTCTACTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	28203936	28190210	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_28191057_28191138_28191245_28191960_28192152_28196214_28196355_28196460_28196570_28198377_28198504_28198600_28198770_28201455_28201555_28202112_28202250_28202346
H1_mix_00029502	chr15	-	600	1	FSM	ENSG00000260053.2	ENST00000566803.2	2184	1	1561	23	1561	-23	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAAAGTTTTATTTCAGC	NA	False	NA	NA	False	AATGAA	-2	NA	28507247	28506647	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_28506600_28507200
H1_mix_00029503	chr15	-	200	1	FSM	ENSG00000259299.1	ENST00000560524.1	1465	1	874	391	874	-391	mono-exon	FALSE	NA	NA	NA	NA	NA	190	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGCACAAAGCAATAGAGG	NA	False	NA	NA	False	NA	NA	NA	29234263	29234063	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_29234100_29234300
H1_mix_00029506	chr15	-	3241	5	FSM	ENSG00000166664.15	ENST00000692430.1	1618	5	-97	-1526	-97	226	multi-exon	FALSE	canonical	3	19	junction_4	4.55521678957215	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCACAAGATTTTCGGTTT	NA	False	NA	NA	False	NA	NA	NA	30373354	30360339	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_30362812_30367417_30367528_30371097_30371185_30372146_30372342_30372977
H1_mix_00029507	chr15	-	965	1	FSM	ENSG00000260382.1	ENST00000561684.1	965	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	787	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACTGCTTCCCATCCCTT	NA	False	NA	NA	False	NA	NA	NA	30883231	30882266	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_30882300_30883200
H1_mix_00029509	chr15	-	394	1	FSM	ENSG00000259358.1	ENST00000559530.1	2459	1	1090	975	1090	-975	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTGTTCAAGACCAAGAG	NA	False	NA	NA	False	NA	NA	NA	31767111	31766717	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_31766700_31767100
H1_mix_00029510	chr15	-	2130	8	NNC	ENSG00000223509.8	novel	1613	7	NA	NA	373	2448	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	10.2040408162449	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTCAGTTTTCTGGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	32533368	32517399	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_32518446_32522447_32522568_32523028_32523214_32524470_32524601_32526812_32526979_32528531_32528702_32529782_32529939_32533211
H1_mix_00029511	chr15	-	1337	6	FSM	ENSG00000223509.8	ENST00000561563.6	1673	6	0	336	0	-3	multi-exon	FALSE	canonical	3	9	junction_1	10.2489023802552	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTACGCTCAGAGCGGC	NA	False	NA	NA	False	NA	NA	NA	32533741	32523028	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_32523214_32524470_32524601_32526812_32526979_32528531_32528702_32529782_32529939_32533211
H1_mix_00029512	chr15	-	884	4	FSM	ENSG00000134152.11	ENST00000561270.5	884	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	181.989621193688	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCAAGACCAATCATCATT	8515	False	NA	-76	True	NA	NA	NA	34153050	34141961	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34142372_34145397_34145492_34148631_34148751_34152789
H1_mix_00029518	chr15	-	2601	14	NNC	ENSG00000176454.15	novel	2165	14	NA	NA	-62	4	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	40.0510029866505	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGATGTTACCATTACTT	454	False	NA	NA	False	ATTAAA	-19	NA	34367258	34358904	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_34359303_34359588_34359746_34360110_34360210_34360753_34361533_34362195_34362322_34362572_34362656_34362781_34362837_34363421_34363457_34363660_34363720_34364012_34364074_34364193_34364307_34365007_34365229_34365558_34365702_34366986
H1_mix_00029522	chr15	-	6437	23	NIC	ENSG00000175265.18	novel	5777	25	NA	NA	0	0	intron_retention	FALSE	canonical	3	60	junction_22	54.5957533237864	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTTTTTGCCTTAAAA	406	False	NA	-16	True	AATAAA	-19	NA	34437466	34379067	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_34381614_34381700_34381857_34381967_34382069_34382150_34382252_34382385_34382530_34382796_34383054_34383440_34383529_34383745_34383854_34383960_34384048_34385047_34385158_34385253_34385339_34385426_34385475_34385739_34385779_34386624_34387953_34389643_34389769_34391122_34391427_34398633_34398730_34399154_34399204_34400711_34400760_34404916_34405056_34406673_34406871_34407523_34407736_34437397
H1_mix_00029523	chr15	-	1513	2	ISM	ENSG00000175265.18	ENST00000432566.6	4577	15	5465	1245	5465	-1245	3prime_fragment	FALSE	canonical	3	264	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGACACCTGGCATTCCT	NA	False	NA	NA	False	AATGAA	-19	NA	34381915	34380315	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_34381614_34381700
H1_mix_00029524	chr15	-	6737	23	NIC	ENSG00000215252.12	novel	5607	24	NA	NA	-46	-7	intron_retention	FALSE	canonical	3	46	junction_22	45.5383772400038	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAGTTATGGGGTGAA	4752	False	NA	99	True	AATAAA	-14	NA	34583697	34525101	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_34527835_34527921_34528078_34528188_34528290_34528371_34528473_34528606_34528751_34529017_34529275_34529661_34529750_34529966_34530075_34530181_34530269_34531268_34531379_34531474_34531560_34531647_34531696_34531960_34532000_34532845_34534174_34535864_34535990_34537343_34537648_34544857_34544954_34545377_34545427_34546934_34546983_34551137_34551277_34552894_34553092_34553744_34553957_34583515
H1_mix_00029526	chr15	-	5471	4	NNC	ENSG00000198146.4	novel	5439	3	NA	NA	0	47524	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	567.515246980692	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGGCGTATAAAAAAGTAT	-17	True	NA	NA	False	AAAAAG	-2	NA	34988287	34930816	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_34930849_34978340_34983491_34987556_34987674_34988115
H1_mix_00029527	chr15	-	289	4	FSM	ENSG00000021776.11	ENST00000558202.1	497	4	112	96	112	-96	multi-exon	FALSE	canonical	3	372	junction_2	20.4341761653255	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACCCACATAAGCCATTAC	5518	False	NA	NA	False	TTTAAA	-21	NA	34964290	34948229	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34948385_34952884_34952921_34960773_34960815_34964233
H1_mix_00029528	chr15	-	614	2	FSM	ENSG00000198146.4	ENST00000559564.1	563	2	-62	11	0	-11	multi-exon	FALSE	canonical	3	103	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAATACTTTTACCACAG	-17	True	NA	NA	False	AAGAAA	-17	NA	34988287	34983048	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34983491_34988115
H1_mix_00029529	chr15	-	892	1	FSM	ENSG00000259592.1	ENST00000561466.1	512	1	-198	-182	-198	182	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGGCTTAGCCCCTCTGC	NA	False	NA	NA	False	NA	NA	NA	35122282	35121390	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_35121400_35122300
H1_mix_00029530	chr15	-	3648	4	FSM	ENSG00000134146.12	ENST00000440392.3	3648	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	92.6318879580173	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCCTGGTTTCTTCATGT	-20	True	NA	NA	False	AATAAA	-15	NA	35546192	35518993	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_35522279_35538273_35538468_35542412_35542508_35546118
H1_mix_00029531	chr15	-	3924	4	NNC	ENSG00000166073.11	novel	3912	3	NA	NA	0	87332	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	301.233390505693	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAGGAATGGTAGGGAAG	-4	True	NA	NA	False	AAAAAG	-1	NA	39920266	39711675	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_39711701_39799020_39802255_39807005_39807259_39919854
H1_mix_00029532	chr15	-	6931	4	NNC	ENSG00000166073.11	novel	3912	3	NA	NA	-683	2151	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_2	213.113949697235	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGAAAGATTTGCTTTCA	-10	True	NA	NA	False	NA	NA	NA	39920949	39796856	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_39802255_39805219_39805405_39807005_39807259_39919854
H1_mix_00029533	chr15	-	747	4	FSM	ENSG00000104081.14	ENST00000561282.5	747	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	21.5458168149231	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACACTGTGTCTTGTGAAA	2488	False	NA	NA	False	NA	NA	NA	40106422	40091717	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40091889_40104179_40104341_40105794_40106092_40106304
H1_mix_00029534	chr15	-	634	4	FSM	ENSG00000104081.14	ENST00000559701.5	630	4	0	-4	0	0	multi-exon	FALSE	canonical	3	8	junction_1	16.3367343397905	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGGGCTGCCCTCTTCAC	-3	True	NA	NA	False	NA	NA	NA	40108879	40091786	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40091889_40105794_40106092_40108258_40108387_40108772
H1_mix_00029535	chr15	-	1882	2	FSM	ENSG00000176753.5	ENST00000623360.1	2129	2	82	165	82	-165	multi-exon	FALSE	canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTAACCTAGAATCGACA	147	False	NA	NA	False	AATGAA	-34	NA	40252828	40250828	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40252540_40252657
H1_mix_00029536	chr15	-	540	1	FSM	ENSG00000176753.5	ENST00000559727.1	1194	1	843	-189	784	189	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGACAGTGCAGGGATTTT	849	False	NA	NA	False	NA	NA	NA	40252126	40251586	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40251600_40252100
H1_mix_00029537	chr15	-	439	1	FSM	ENSG00000273855.1	ENST00000622487.1	442	1	-47	50	-47	-50	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGCAGCTCTAGAAAACAA	5357	False	NA	NA	False	NA	NA	NA	40285956	40285517	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40285500_40286000
H1_mix_00029538	chr15	-	1193	4	ISM	ENSG00000137841.12	ENST00000559381.5	1641	6	715	1	58	0	3prime_fragment	FALSE	canonical	3	31	junction_1	6.37704215656966	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGCTTAAGCCTGGTC	7305	False	NA	-10	True	ATTAAA	-17	NA	40290614	40287908	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_40288919_40289271_40289359_40290024_40290083_40290576
H1_mix_00029539	chr15	-	4242	31	FSM	ENSG00000137841.12	ENST00000456256.6	4242	31	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_24	13.7294897534063	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGCCTTGGCCCTGCTT	114	False	NA	NA	False	NA	NA	NA	40307825	40288138	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40288919_40289271_40289359_40290024_40290083_40290576_40290673_40290760_40290838_40291017_40291184_40291264_40291488_40291848_40291925_40292063_40292159_40292338_40292444_40292925_40293026_40293559_40293725_40294265_40294421_40294935_40295061_40295200_40295286_40296295_40296393_40296521_40296635_40296745_40296909_40297520_40297606_40297876_40297960_40298222_40298381_40298561_40298709_40298797_40298965_40299127_40299229_40301956_40302033_40302135_40302190_40302269_40302350_40302468_40302610_40303287_40303357_40304000_40304079_40307588
H1_mix_00029540	chr15	-	576	4	FSM	ENSG00000128891.16	ENST00000558113.5	576	4	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	27.7248384425711	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCGGGCCAGGCAGGGATG	11	True	NA	NA	False	NA	NA	NA	40565011	40539228	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40539356_40557215_40557373_40562771_40563028_40564975
H1_mix_00029544	chr15	-	531	5	FSM	ENSG00000104129.10	ENST00000561110.5	529	5	0	-2	0	2	multi-exon	FALSE	canonical	3	212	junction_4	11.6270159542335	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTACCTCTATCCCATA	1266	False	NA	-1	True	AATAAA	-17	NA	40775621	40767870	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40768063_40773726_40773838_40774355_40774437_40775030_40775109_40775552
H1_mix_00029545	chr15	-	485	2	FSM	ENSG00000261183.6	ENST00000565315.1	629	2	0	144	0	41	multi-exon	FALSE	canonical	3	33	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAACCGTTTACTTAGTC	-5	True	NA	40	True	NA	NA	NA	40844332	40835951	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40836283_40844178
H1_mix_00029546	chr15	-	827	3	NNC	ENSG00000261183.6	novel	643	3	NA	NA	81	-2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	73.5	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAACTTTTGGAATGCAT	187	False	NA	-7	True	AATAAA	-18	NA	40844203	40835998	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_40836283_40838168_40838687_40844178
H1_mix_00029547	chr15	-	534	3	NIC	ENSG00000261183.6	novel	643	3	NA	NA	2	-8	combination_of_known_junctions	FALSE	canonical	1	5	junction_2	21	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGCTGGTAACTTTTGGA	3899	False	NA	-13	True	AATAAA	-12	NA	40840491	40836004	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_40836283_40838542_40838687_40840379
H1_mix_00029549	chr15	-	542	5	FSM	ENSG00000128908.18	ENST00000560799.5	542	5	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_3	5.67340285895511	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGATGAATTGGATGGGAA	NA	False	NA	NA	False	AAGAAA	-4	NA	40997710	40984343	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40984353_40985337_40985427_40987090_40987194_40987815_40987975_40997528
H1_mix_00029550	chr15	-	402	3	FSM	ENSG00000128908.18	ENST00000561172.1	402	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	8	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTTGCCCTACTAATT	NA	False	NA	NA	False	AATAAA	-14	NA	41072015	41069511	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_41069666_41070466_41070548_41071848
H1_mix_00029551	chr15	-	694	3	FSM	ENSG00000103966.11	ENST00000569223.1	2032	3	0	1338	0	-1338	multi-exon	FALSE	canonical	3	369	junction_1	49.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCCAAGTGTCAACCAGGA	7	True	NA	NA	False	NA	NA	NA	41972552	41942941	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_41943165_41953763_41953941_41972258
H1_mix_00029556	chr15	-	2935	19	FSM	ENSG00000103978.16	ENST00000448392.5	3049	19	38	76	38	-76	multi-exon	FALSE	canonical	0	0	junction_8	80.2367830737542	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTTTTCTCATTTTTTT	NA	False	NA	NA	False	TATAAA	-19	NA	42273546	42210527	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_42211750_42217802_42217834_42218322_42218379_42219580_42219643_42220061_42220136_42226805_42226910_42227710_42227770_42228711_42228821_42231191_42231261_42233212_42233307_42236319_42236420_42237431_42237616_42239669_42239732_42244049_42244168_42260957_42261003_42261195_42261250_42264089_42264204_42267946_42268033_42273254
H1_mix_00029557	chr15	-	2871	20	NNC	ENSG00000103978.16	novel	2964	20	NA	NA	4	-80	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	78.2731208042915	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTATTTTTCTCATTT	1	True	NA	NA	False	TATAAA	-15	NA	42273428	42210531	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_42211750_42217802_42217834_42218322_42218376_42219580_42219643_42220061_42220136_42226805_42226910_42227710_42227770_42228711_42228821_42231191_42231261_42233212_42233307_42236319_42236420_42237431_42237616_42239669_42239732_42244049_42244168_42260957_42261003_42261195_42261250_42264089_42264204_42267946_42268033_42272062_42272124_42273254
H1_mix_00029559	chr15	-	7717	20	NIC	ENSG00000103994.18	novel	5677	20	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	29	junction_12	41.9777674964846	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTTTCGTTACCTTGTC	23	False	NA	-4	True	AATAAA	-21	NA	42491105	42412819	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_42417361_42417804_42417952_42421060_42421133_42421916_42421989_42422500_42422621_42423997_42424061_42424833_42425026_42428017_42428135_42435383_42435519_42437231_42437378_42438611_42438668_42439032_42439553_42442072_42442415_42444201_42444263_42444826_42444982_42446588_42446659_42448071_42448706_42466052_42466115_42472235_42472322_42490979
H1_mix_00029560	chr15	-	7372	5	FSM	ENSG00000180979.10	ENST00000323443.6	7351	5	0	-21	0	21	multi-exon	FALSE	canonical	3	98	junction_1	3.76662979332984	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTATTTCACTTAACACAA	-17	True	NA	19	True	NA	NA	NA	42548802	42537798	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_42544125_42545076_42545263_42547260_42547530_42548105_42548245_42548350
H1_mix_00029563	chr15	-	1961	12	FSM	ENSG00000128881.18	ENST00000567840.5	1961	12	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_8	6.27206847660376	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGCATTTTTGTAACAC	-3	True	NA	NA	False	CATAAA	-18	NA	42920809	42776917	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_42777243_42783418_42783636_42794643_42794802_42810613_42810740_42811687_42811781_42817031_42817098_42827927_42828033_42829937_42830079_42840359_42840434_42872610_42872759_42878548_42878685_42920437
H1_mix_00029564	chr15	-	511	5	FSM	ENSG00000128881.18	ENST00000562880.5	556	5	45	0	45	0	multi-exon	FALSE	canonical	2	4	junction_4	9.95929214352105	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGTAGGGACCTTTTCTAT	NA	False	NA	NA	False	NA	NA	NA	42908230	42829940	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_42830079_42840359_42840434_42872610_42872759_42878548_42878685_42908215
H1_mix_00029565	chr15	-	6787	1	FSM	ENSG00000168806.8	ENST00000305641.7	6925	1	-9	147	0	-147	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGGGGAGGTAAGCATTA	-13	True	NA	NA	False	NA	NA	NA	43330582	43323795	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_43323800_43330600
H1_mix_00029566	chr15	-	6651	3	ISM	ENSG00000140265.14	ENST00000396976.6	5595	5	1526	0	1154	0	3prime_fragment	FALSE	canonical	3	86	junction_1	20	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTGTTTCTTGAAGTGT	2517	False	NA	-10	True	AATAAA	-19	NA	43368522	43358171	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_43361942_43363914_43364383_43366109
H1_mix_00029570	chr15	-	2722	4	ISM	ENSG00000067369.14	ENST00000476454.5	2222	7	2013	533	-1917	-531	internal_fragment	FALSE	canonical	3	317	junction_3	39.6344406910062	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAGCACATAGTGATTATA	NA	False	NA	NA	False	NA	NA	NA	43415203	43407746	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_43408089_43408896_43409097_43409646_43409742_43413118
H1_mix_00029575	chr15	-	5553	30	FSM	ENSG00000168781.23	ENST00000360301.8	5565	30	0	12	0	1	multi-exon	FALSE	canonical	1	1	junction_3	10.6199059271962	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGTGATGGATGATGGTG	29	False	NA	-11	True	AATAAA	-18	NA	43590175	43533473	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_43535477_43539469_43539584_43558794_43558933_43564866_43564993_43568462_43568554_43571411_43571577_43571723_43571841_43572768_43572877_43573033_43573149_43573356_43573485_43573808_43574033_43574221_43574364_43576370_43576554_43576826_43576949_43577107_43577240_43577452_43577536_43577621_43577732_43577875_43577952_43578069_43578157_43579018_43579121_43581001_43581124_43581226_43581389_43581852_43581955_43582094_43582250_43582563_43582650_43582861_43582953_43583403_43583600_43584357_43584533_43584798_43584893_43590171
H1_mix_00029578	chr15	-	508	2	FSM	ENSG00000168781.23	ENST00000465123.1	508	2	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGAGATTCATTTGGCA	7949	False	NA	NA	False	ATTAAA	-16	NA	43576948	43576167	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_43576554_43576826
H1_mix_00029579	chr15	-	572	5	FSM	ENSG00000168781.23	ENST00000427877.1	572	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	15.7241851935164	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCCCCACGGAGGCTGAG	8012	False	NA	NA	False	NA	NA	NA	43582192	43579073	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_43579121_43581001_43581124_43581226_43581430_43581852_43581955_43582094
H1_mix_00029580	chr15	-	631	1	FSM	ENSG00000275601.1	ENST00000621680.1	635	1	-17	21	-17	-21	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTCAATTAAACTGGGAC	5857	False	NA	NA	False	AATAAA	-5	NA	43643040	43642409	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_43642400_43643000
H1_mix_00029581	chr15	-	2786	21	NNC	ENSG00000249839.1	novel	3235	26	NA	NA	3387	16535	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	11.5640607054788	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTCTCTTCAAAAACTTC	NA	False	NA	NA	False	CATAAA	-44	NA	43680952	43647118	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_43647468_43647916_43648064_43663653_43663717_43664417_43664544_43668027_43668119_43670976_43671142_43671288_43671406_43672333_43672442_43672598_43672714_43672921_43673050_43673373_43673598_43673786_43673929_43675935_43676119_43676391_43676514_43676672_43676805_43677017_43677101_43677186_43677297_43677440_43677517_43677634_43677722_43678589_43678692_43680836
H1_mix_00029582	chr15	-	964	6	FSM	ENSG00000128886.12	ENST00000497465.1	964	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	8.50881895447306	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTAGGAAAAGTGACAGAG	1793	False	NA	NA	False	NA	NA	NA	43775505	43772900	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_43773227_43773303_43773349_43774181_43774354_43774475_43774519_43774595_43774774_43775305
H1_mix_00029585	chr15	-	2042	14	FSM	ENSG00000171877.21	ENST00000449926.5	2042	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	12.0221688716595	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGTCTGAGTTGGATTT	NA	False	NA	0	True	ATTAAA	-18	NA	43924309	43873274	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_43873940_43874118_43874463_43883702_43883810_43884726_43884796_43885680_43885756_43888174_43888267_43888808_43888873_43891980_43892070_43902174_43902263_43905827_43905952_43909881_43909980_43919458_43919538_43919766_43919810_43924204
H1_mix_00029586	chr15	-	713	1	NIC	ENSG00000171877.21	novel	958	2	NA	NA	212	-4562	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAAATGCCTATCTA	266	False	NA	NA	False	AAAAAG	-11	NA	43879634	43878921	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_43878900_43879600
H1_mix_00029588	chr15	-	1093	3	FSM	ENSG00000179523.6	ENST00000560750.1	1093	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	31.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAGAAAACAATGTACACA	242	False	NA	NA	False	AAAACA	-20	NA	44536640	44527256	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_44527540_44535262_44535475_44536042
H1_mix_00029590	chr15	-	7633	40	FSM	ENSG00000104133.16	ENST00000682065.1	7624	40	11	-20	1	0	multi-exon	FALSE	canonical	2	8	junction_11	17.3361020395315	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATGTCATTATTACTGC	1	True	NA	-1	True	AATAAA	-17	NA	44663667	44562695	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_44563302_44564546_44564699_44565853_44566010_44566216_44566306_44567423_44567593_44569397_44569506_44570524_44570659_44572682_44572821_44573546_44573746_44574901_44575042_44583813_44584415_44585635_44585851_44589251_44589415_44592330_44592439_44595258_44595460_44596082_44596356_44596783_44596944_44598264_44598374_44598630_44598837_44600466_44600633_44606024_44606092_44608443_44608606_44610839_44610986_44613429_44613537_44615362_44615567_44620189_44620404_44621758_44621935_44622219_44622348_44622727_44622800_44626330_44626508_44628668_44628845_44629232_44629389_44633504_44633638_44648865_44649012_44651490_44651940_44652128_44652267_44657094_44657297_44659078_44659304_44660431_44660617_44663390
H1_mix_00029592	chr15	-	6404	32	FSM	ENSG00000104133.16	ENST00000558319.5	6426	32	24	-2	4	2	multi-exon	FALSE	canonical	2	32	junction_18	12.513135658013	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGCTTTTTATTGTTT	14	True	NA	NA	False	AATACA	-38	NA	44663654	44573354	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_44573746_44574901_44575042_44583813_44584559_44585635_44585851_44589251_44589415_44592330_44592439_44595258_44595460_44596082_44596356_44596783_44596944_44598264_44598374_44598630_44598837_44600466_44600633_44606024_44606092_44608443_44608606_44610839_44610986_44613429_44613537_44615362_44615567_44620189_44620404_44621758_44621935_44622219_44622348_44622727_44622800_44626330_44626508_44628668_44628845_44629232_44629389_44633504_44633638_44648865_44649012_44651490_44651940_44652128_44652267_44657094_44657297_44659078_44659304_44660431_44660617_44663390
H1_mix_00029595	chr15	-	302	4	ISM	ENSG00000259479.6	ENST00000561384.3	2498	10	3116	13765	3116	-12452	internal_fragment	FALSE	canonical	2	2	junction_3	33.7671766990109	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGTGCTCCCCGAGAAA	1026	False	NA	NA	False	NA	NA	NA	44881578	44839511	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_44839531_44847397_44847563_44850353_44850388_44881494
H1_mix_00029596	chr15	-	2058	6	NIC	ENSG00000138606.20	novel	2215	7	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_2	37.5712656161594	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTCTGGAGCAGACACAG	NA	False	NA	-41	True	TATAAA	-2	NA	45187987	45167250	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_45168134_45171882_45172003_45172146_45172319_45175218_45175426_45178164_45178307_45187453
H1_mix_00029597	chr15	-	1839	5	NIC	ENSG00000138606.20	novel	2062	6	NA	NA	6	-82	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	57.0016447131133	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCGCGCCCGCGCCTCCG	18	False	NA	-10	True	AATAAA	-22	NA	45187946	45167332	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_45168134_45171882_45172079_45175218_45175426_45178164_45178307_45187453
H1_mix_00029598	chr15	-	884	4	FSM	ENSG00000138606.20	ENST00000559566.5	884	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	42.5284218689886	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGGATAATATAGGGAAGGA	9704	False	NA	NA	False	AATGAA	-8	NA	45178260	45171593	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_45172003_45172146_45172319_45175218_45175426_45178164
H1_mix_00029599	chr15	-	277	1	FSM	ENSG00000259932.1	ENST00000568314.1	623	1	83	263	83	-263	mono-exon	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGCCCCGTAAGTAGGCCA	2052	False	NA	NA	False	NA	NA	NA	45199056	45198779	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_45198800_45199100
H1_mix_00029600	chr15	-	3964	8	FSM	ENSG00000171766.17	ENST00000675323.1	3964	8	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_6	19.7845538597304	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAGTGTTGATACCGTA	0	True	NA	-67	True	ATTAAA	-41	NA	45378544	45361185	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_45364017_45364796_45364861_45366045_45366211_45366370_45366509_45368069_45368261_45369325_45369522_45376600_45376820_45378384
H1_mix_00029601	chr15	-	519	1	FSM	ENSG00000284540.1	ENST00000640911.1	628	1	7	102	7	55	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCTGACCCCCCCACCAC	NA	False	NA	NA	False	NA	NA	NA	47134115	47133596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_47133600_47134100
H1_mix_00029602	chr15	-	804	1	FSM	ENSG00000213862.4	ENST00000497325.1	792	1	14	-26	14	26	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACATAAAATAATTAAAATAA	38	False	NA	NA	False	ACTAAA	-33	NA	47730921	47730117	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_47730100_47730900
H1_mix_00029603	chr15	-	12520	10	FSM	ENSG00000104177.19	ENST00000558395.1	868	10	-3222	-8430	-3222	1	multi-exon	FALSE	canonical	3	36	junction_5	37.5825018385477	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAGTGCCCTGTTGTCCA	NA	False	NA	-4	True	AATAAA	-16	NA	48162892	48134630	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_48143072_48149031_48149084_48149162_48149372_48151472_48151572_48151873_48151943_48153791_48153894_48157992_48158057_48158174_48158225_48158768_48158923_48159612
H1_mix_00029604	chr15	-	1752	6	FSM	ENSG00000104177.19	ENST00000620867.4	1742	6	0	-10	0	0	multi-exon	FALSE	canonical	3	101	junction_3	26.3469163281019	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTTATTTGTTGCTTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	48152280	48141795	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_48143072_48149031_48149084_48149162_48149372_48151472_48151572_48151873_48151943_48152233
H1_mix_00029605	chr15	-	2979	16	NIC	ENSG00000104177.19	novel	1966	16	NA	NA	-8	0	intron_retention	FALSE	non_canonical	0	0	junction_13	41.4596993074801	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGCTTATTTGTTGCTTT	11	True	NA	NA	False	ATTAAA	-19	NA	48178303	48141796	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_48143072_48149031_48149084_48149162_48149372_48151099_48151172_48151472_48151572_48151873_48151943_48152233_48152285_48153791_48153894_48157992_48158057_48158174_48158225_48158768_48158923_48159612_48159805_48165932_48166027_48167341_48167402_48168630_48168840_48178076
H1_mix_00029606	chr15	-	2898	14	NIC	ENSG00000104177.19	novel	2958	16	NA	NA	8	0	intron_retention	FALSE	non_canonical	0	0	junction_11	49.3316274559802	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGCTTATTTGTTGCTTT	23	False	NA	NA	False	ATTAAA	-19	NA	48178345	48141796	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_48143072_48149031_48149084_48149162_48149372_48151472_48151572_48151873_48151943_48153791_48153894_48157992_48158057_48158174_48158225_48158768_48158923_48159612_48159805_48165932_48166027_48167341_48167402_48168630_48168840_48178076
H1_mix_00029607	chr15	-	537	5	FSM	ENSG00000104177.19	ENST00000561301.5	537	5	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_3	5.30919014539883	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTGCTAGCAGAAATTGAG	NA	False	NA	NA	False	AAAAAG	-31	NA	48158921	48152116	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_48152285_48153791_48153894_48157992_48158057_48158174_48158225_48158768
H1_mix_00029608	chr15	-	526	1	FSM	ENSG00000273925.1	ENST00000616350.1	526	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTTATCTCATTATAGT	NA	False	NA	NA	False	AATAAA	-21	NA	48663056	48662530	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_48662500_48663100
H1_mix_00029609	chr15	-	5026	25	ISM	ENSG00000103995.14	ENST00000399334.7	5097	26	-82	2465	0	-110	5prime_fragment	FALSE	canonical	3	12	junction_4	14.8683458506094	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAGAGTAACCAACAAAAA	2	True	NA	NA	False	NA	NA	NA	48811069	48740615	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_48741705_48741946_48742101_48744239_48744344_48744895_48744993_48752348_48752470_48755902_48756554_48760134_48760267_48762390_48762673_48767059_48767193_48767334_48767464_48768218_48768329_48768955_48769082_48772486_48772692_48781195_48781360_48782138_48782231_48783972_48784121_48788800_48789002_48791236_48791377_48793320_48793462_48796009_48796161_48797300_48797580_48797660_48797731_48797947_48798052_48805562_48805657_48810960
H1_mix_00029610	chr15	-	4647	9	ISM	ENSG00000138593.9	ENST00000261847.7	6779	17	29480	820	100	-820	3prime_fragment	FALSE	canonical	3	8	junction_6	2.3946555075835	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTGCTGTGAAGATTAC	NA	False	NA	NA	False	ACTAAA	-44	NA	49016953	48989589	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_48992927_48996366_48996587_48999832_48999988_49000876_49001098_49009215_49009379_49011730_49011864_49012647_49012818_49016559_49016702_49016847
H1_mix_00029611	chr15	-	562	5	FSM	ENSG00000166262.16	ENST00000561116.5	562	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	3.34477204006491	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGTGTTACTGCTTTGG	5716	False	NA	NA	False	AATATA	-5	NA	49615238	49576559	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_49576846_49577628_49577665_49588015_49588084_49611214_49611269_49615120
H1_mix_00029612	chr15	-	614	5	FSM	ENSG00000166262.16	ENST00000558862.2	670	5	58	-2	-17	2	multi-exon	FALSE	canonical	1	1	junction_1	3.24037034920393	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTTATTTATTTTTATC	4812	False	NA	NA	False	NA	NA	NA	49620839	49589773	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_49590008_49606155_49606219_49611214_49611269_49615120_49615244_49620699
H1_mix_00029613	chr15	-	2732	10	NNC	ENSG00000104064.18	novel	4609	9	NA	NA	-13	31103	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	79.1797455083396	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTCAGCTAACTCCCTT	-7	True	NA	NA	False	NA	NA	NA	50355166	50244285	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_50244312_50277259_50278785_50286067_50286184_50289482_50289669_50300788_50300903_50301256_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50354984
H1_mix_00029614	chr15	-	7212	38	NIC	ENSG00000092439.16	novel	7218	39	NA	NA	5	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	27.7594540651054	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTAGTGAGTTTAATCA	-1	True	NA	-6	True	AATAAA	-15	NA	50686792	50560293	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_50561809_50569886_50569994_50570103_50570156_50574273_50574480_50574636_50574720_50574851_50575136_50575723_50575790_50575868_50575920_50580873_50580909_50583088_50583157_50586391_50586489_50589591_50589657_50591910_50592627_50593616_50593750_50594428_50594614_50596254_50596382_50599121_50599297_50604865_50605145_50607199_50607329_50609580_50609725_50609805_50609962_50611092_50611322_50612548_50612830_50613706_50613842_50614122_50614264_50619744_50619799_50624165_50624301_50628148_50628250_50631416_50631490_50632868_50632993_50634381_50634557_50637421_50637594_50639423_50639549_50643339_50643554_50648686_50648886_50657780_50657820_50662966_50663047_50686530
H1_mix_00029615	chr15	-	4930	18	NNC	ENSG00000138600.10	novel	7270	15	NA	NA	0	5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	51.773795993312	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTTTTATTTTGAATGA	-19	True	NA	NA	False	AATAAA	-24	NA	50765706	50702260	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_50704083_50705082_50706120_50707518_50707875_50719939_50720101_50722123_50722202_50725220_50725324_50726072_50726127_50726320_50726378_50730964_50731040_50732602_50732685_50736100_50736203_50736643_50736741_50739679_50739829_50747494_50747629_50748112_50748203_50748687_50748871_50749635_50749747_50765467
H1_mix_00029618	chr15	-	2125	2	FSM	ENSG00000183578.8	ENST00000637513.2	2206	2	81	0	81	0	multi-exon	FALSE	canonical	2	4	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAGATCTTAGAGTTGTG	-3	True	NA	NA	False	AATAAA	-19	NA	51094825	51056600	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_51058444_51094543
H1_mix_00029619	chr15	-	3143	11	ISM	ENSG00000104093.14	ENST00000560891.6	10596	44	162412	0	-577	0	3prime_fragment	FALSE	canonical	3	22	junction_10	5.20480547186924	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTAGTTTGATACTGTT	NA	False	NA	-18	True	AATAAA	-15	NA	51460359	51447790	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_51449194_51450128_51450347_51451644_51451698_51453549_51453642_51455150_51455229_51456065_51456194_51456308_51456370_51457327_51457467_51458505_51458628_51458708_51458796_51459597
H1_mix_00029622	chr15	-	879	1	FSM	ENSG00000274528.1	ENST00000612566.1	866	1	-51	38	-51	-38	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACCCAGGTGAAATAAACAG	1769	False	NA	-36	True	NA	NA	NA	52018083	52017204	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_52017200_52018100
H1_mix_00029623	chr15	-	661	2	FSM	ENSG00000137875.4	ENST00000260442.3	1249	2	367	221	360	-221	multi-exon	FALSE	canonical	3	3	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTAAACATGGCCACAG	7199	False	NA	NA	False	NA	NA	NA	52112408	52109483	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_52109974_52112237
H1_mix_00029624	chr15	-	918	3	FSM	ENSG00000069966.19	ENST00000560116.1	918	3	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_1	14.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAATTCCTATATTTATT	36	True	NA	NA	False	AATAAA	-18	NA	52179900	52149277	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_52149926_52153939_52154077_52179767
H1_mix_00029625	chr15	-	4909	21	ISM	ENSG00000128833.13	ENST00000261839.12	6977	41	55269	0	3024	0	3prime_fragment	FALSE	canonical	3	51	junction_18	13.8079687137537	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTGGGTCAGATTCTTT	NA	False	NA	NA	False	AATAAA	-14	NA	52240535	52192321	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_52194055_52195376_52195458_52196308_52196484_52204864_52205148_52205815_52205967_52208553_52208644_52211729_52211885_52213187_52213287_52214602_52214691_52218518_52218688_52219758_52219823_52221161_52221256_52223543_52223725_52224900_52224982_52225074_52225139_52225438_52225533_52229132_52229314_52232621_52232686_52235669_52235764_52237481_52237647_52239732
H1_mix_00029626	chr15	-	12249	40	NNC	ENSG00000197535.16	novel	12130	42	NA	NA	-8	7661	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14.2150756617183	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAGAAATAAATAAAAT	-7	True	NA	NA	False	NA	NA	NA	52529140	52299619	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_52299644_52307282_52313849_52314122_52314204_52317047_52317223_52319059_52319343_52321358_52321510_52323354_52323445_52327851_52328007_52330352_52330500_52336462_52336557_52340195_52340395_52346360_52346462_52351253_52351482_52353604_52353659_52353870_52354015_52359967_52360082_52364553_52364703_52367030_52367125_52370168_52370418_52372123_52372364_52375303_52375461_52376346_52376559_52379624_52379734_52379821_52379909_52383090_52383189_52384160_52384323_52387828_52387913_52389237_52389364_52391929_52392071_52396315_52396398_52397200_52397467_52405286_52405394_52407291_52407400_52408058_52408141_52410332_52410477_52416144_52416302_52425829_52425975_52428397_52428570_52433174_52433286_52528779
H1_mix_00029628	chr15	-	4602	2	NNC	ENSG00000169856.9	novel	4352	2	NA	NA	23700	5157	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCCTTGCCTTCTTTTGTT	NA	False	NA	0	True	AATAAA	-33	NA	52757483	52749895	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_52754100_52757085
H1_mix_00029629	chr15	-	4163	3	FSM	ENSG00000259203.3	ENST00000660503.2	2211	3	364	-2316	5	-2	multi-exon	TRUE	canonical	2	6	junction_1	13.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTTTTCCAGAATCCA	6	True	NA	-14	True	AATAAA	-16	NA	52804887	52800167	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_52803848_52804208_52804298_52804493
H1_mix_00029630	chr15	-	4101	3	FSM	ENSG00000166415.15	ENST00000614174.4	4224	3	0	123	0	-123	multi-exon	FALSE	canonical	3	9	junction_2	6.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTACTCTTTTCACCTTCA	NA	False	NA	NA	False	NA	NA	NA	53541080	53513864	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_53517755_53523217_53523323_53540974
H1_mix_00029631	chr15	-	1389	7	NNC	ENSG00000137876.11	novel	1889	6	NA	NA	0	254774	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	816.722600125376	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGGTAATTATCCAGGAA	23	True	NA	NA	False	AATAAA	-33	NA	55196902	54926031	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_54926079_55181313_55182226_55183314_55183401_55185361_55185426_55190974_55191048_55192719_55192834_55196809
H1_mix_00029632	chr15	-	754	1	FSM	ENSG00000279145.2	ENST00000623483.2	5362	1	4768	-160	4768	160	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGCACATGCCTGTAATC	6827	False	NA	NA	False	ACTAAA	-22	NA	55171971	55171217	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_55171200_55172000
H1_mix_00029633	chr15	-	249	1	FSM	ENSG00000276533.1	ENST00000611214.1	498	1	-105	354	-105	-354	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATATGATGACAGGCTTT	392	False	NA	NA	False	NA	NA	NA	55289451	55289202	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_55289200_55289500
H1_mix_00029634	chr15	-	2719	9	NIC	ENSG00000260916.8	novel	3553	9	NA	NA	6	-6	intron_retention	FALSE	canonical	3	24	junction_8	43.0138059232149	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGACAATGTCTTTTCTTT	10	True	NA	NA	False	AATGAA	-9	NA	55408046	55356133	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_55356410_55359538_55360945_55365187_55365310_55371792_55372045_55376948_55377151_55378299_55378377_55385599_55385715_55389364_55389434_55407846
H1_mix_00029635	chr15	-	3291	3	FSM	ENSG00000260916.8	ENST00000568372.5	3388	3	97	0	97	0	multi-exon	FALSE	canonical	3	93	junction_1	10.5	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACTGATTCTGGTGTCT	94	False	NA	NA	False	AATAAA	-22	NA	55372855	55358838	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_55360945_55365187_55365310_55371792
H1_mix_00029636	chr15	-	1567	8	FSM	ENSG00000256061.7	ENST00000457155.6	1567	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	13.2864823126702	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTTTGTATTAATATA	-15	True	NA	NA	False	AATAAA	-15	NA	55498377	55430307	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_55430780_55434904_55435059_55439471_55439582_55450221_55450368_55466929_55467162_55491122_55491257_55497711_55497860_55498206
H1_mix_00029637	chr15	-	1630	9	NNC	ENSG00000256061.7	novel	1897	9	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_7	13.2570735835629	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTTTTGTTTGTATTAA	21	True	NA	NA	False	AATAAA	-11	NA	55498341	55430311	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_55430780_55432496_55432603_55434904_55435059_55439471_55439582_55450221_55450368_55466929_55467162_55491122_55491257_55497714_55497860_55498206
H1_mix_00029638	chr15	-	9454	6	ISM	ENSG00000166450.13	ENST00000389286.9	12142	20	105826	1	38343	-1	3prime_fragment	FALSE	canonical	3	8	junction_3	3.44093010681705	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACCCATGTTTTCTTTT	2474	False	NA	-8	True	AATAAA	-22	NA	55637326	55611544	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_55620267_55620662_55620768_55624341_55624508_55627007_55627129_55628821_55629005_55637169
H1_mix_00029639	chr15	-	1462	1	FSM	ENSG00000230183.4	ENST00000559681.1	1462	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTGGAGTACTGCCCCG	NA	False	NA	NA	False	NA	NA	NA	56007176	56005714	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_56005700_56007200
H1_mix_00029640	chr15	-	8144	10	NNC	ENSG00000181827.16	novel	11022	12	NA	NA	-569	-3255	intron_retention	FALSE	non_canonical	2	4	junction_9	18.7616630392937	231	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGGATCTGAAGGTGTT	655	False	NA	-12	True	ATTAAA	-18	NA	56244448	56090535	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_56096621_56098080_56098377_56101358_56101567_56102168_56102250_56103549_56103671_56142777_56142901_56144400_56144484_56179269_56179304_56243124_56244086_56244296
H1_mix_00029641	chr15	-	4370	22	NIC	ENSG00000137871.21	novel	4399	22	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	2	7	junction_13	23.3684866390713	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAATAATTCTATTTTTCCA	4	True	NA	-19	True	AATAAA	-11	NA	56733494	56630182	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_56632123_56635194_56635251_56642951_56642998_56654197_56654235_56654384_56654504_56658423_56658487_56666394_56666536_56666678_56666987_56668822_56668958_56676669_56676817_56677573_56677675_56678663_56678822_56682253_56682478_56689040_56689151_56689299_56689471_56693097_56693216_56700932_56701073_56701172_56701239_56704120_56704268_56707081_56707144_56707262_56707307_56733457
H1_mix_00029642	chr15	-	4867	17	NNC	ENSG00000137845.15	novel	11158	16	NA	NA	0	3907	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	222.766939591583	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTTCCACATTGTTTATT	11	True	NA	NA	False	NA	NA	NA	58749770	58592964	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_58593196_58595393_58597642_58599597_58599725_58610296_58610518_58610998_58611108_58611807_58611992_58621470_58621622_58627699_58627884_58633195_58633360_58640776_58640961_58643885_58643979_58646054_58646205_58665096_58665198_58679123_58679283_58682195_58682315_58717576_58717728_58749479
H1_mix_00029643	chr15	-	436	3	FSM	ENSG00000137845.15	ENST00000462061.1	436	3	0	0	0	0	multi-exon	FALSE	canonical	3	915	junction_1	16.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTGACCTACAGTTTGG	6330	False	NA	NA	False	TATAAA	-43	NA	58621541	58610926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_58611108_58611807_58611992_58621470
H1_mix_00029644	chr15	-	750	2	FSM	ENSG00000137845.15	ENST00000481164.1	750	2	0	0	0	0	multi-exon	FALSE	canonical	3	948	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGTATTTATGTAATTC	6367	False	NA	NA	False	TTTAAA	-44	NA	58621504	58611275	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_58611992_58621470
H1_mix_00029645	chr15	-	995	6	FSM	ENSG00000137845.15	ENST00000558733.5	995	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	352.670611194072	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTCTCAGTTATTTCTT	11	True	NA	NA	False	ATTAAA	-21	NA	58749770	58655242	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_58655417_58665096_58665198_58679123_58679283_58682195_58682315_58717576_58717728_58749479
H1_mix_00029647	chr15	-	222	1	FSM	ENSG00000199730.1	ENST00000362860.1	303	1	-67	148	-67	-148	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCGATAGAGGAGGACTG	NA	False	NA	NA	False	NA	NA	NA	58704221	58703999	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_58704000_58704200
H1_mix_00029648	chr15	-	4048	21	NIC	ENSG00000137776.17	novel	4168	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	23	junction_15	127.439505256416	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTATGTGTCTTTGTTTTC	-18	True	NA	-6	True	AATAAA	-16	NA	58933616	58879049	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_58880108_58883625_58883787_58886974_58887120_58887225_58887541_58888384_58888556_58889429_58889555_58890280_58890462_58892896_58893061_58893278_58893365_58893820_58893988_58894089_58894194_58894432_58894583_58897114_58897234_58898802_58898853_58899468_58899881_58901259_58901288_58912562_58912611_58913498_58913697_58916934_58917000_58932355_58932444_58933403
H1_mix_00029649	chr15	-	3390	18	NIC	ENSG00000137776.17	novel	4168	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	38	junction_15	175.314882307457	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTATGTGTCTTTGTTTTC	-18	True	NA	-6	True	AATAAA	-16	NA	58933616	58879049	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_58880108_58883625_58883787_58886974_58887120_58887225_58887541_58888384_58888556_58889429_58889555_58890280_58890462_58892896_58893061_58893278_58893365_58893820_58893988_58894089_58894194_58894432_58894583_58897114_58897234_58898802_58898853_58901259_58901288_58916934_58917000_58932355_58932444_58933403
H1_mix_00029650	chr15	-	680	4	FSM	ENSG00000137776.17	ENST00000560494.1	674	4	0	-6	0	0	multi-exon	FALSE	canonical	3	19	junction_1	301.769595699913	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTGAGAACCTTTTTAAT	7531	False	NA	-1	True	AATAAA	-27	NA	58887007	58879418	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_58879777_58879979_58880108_58883625_58883787_58886974
H1_mix_00029651	chr15	-	3021	19	FSM	ENSG00000137776.17	ENST00000557924.5	3021	19	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_18	173.810640896606	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTGTTCATTGCATTTC	-1	True	NA	NA	False	NA	NA	NA	58933599	58879559	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_58880108_58883625_58883787_58886974_58887120_58887225_58887541_58888384_58888556_58889429_58889555_58890280_58890462_58892896_58893061_58893278_58893365_58893820_58893988_58894089_58894194_58894432_58894583_58897114_58897234_58898802_58898853_58901259_58901288_58912562_58912611_58913498_58913697_58916934_58917000_58933403
H1_mix_00029662	chr15	-	505	2	FSM	ENSG00000137776.17	ENST00000474342.1	505	2	0	0	0	0	multi-exon	FALSE	canonical	3	570	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGAGAACAGTTCTTTAT	-18	True	NA	NA	False	NA	NA	NA	58933616	58932151	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_58932444_58933403
H1_mix_00029663	chr15	-	970	6	FSM	ENSG00000140307.11	ENST00000396063.5	970	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	720.495773755822	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTAATAACTGGTGAAGC	9	True	NA	-10	True	AATAAA	-16	NA	59657514	59638868	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_59639158_59642135_59642263_59650668_59650774_59652205_59652327_59656814_59657034_59657405
H1_mix_00029667	chr15	-	1445	10	FSM	ENSG00000140299.13	ENST00000415213.7	1509	10	64	0	64	0	multi-exon	FALSE	canonical	1	3	junction_9	103.270948910567	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATTTATATGCATAAAT	456	False	NA	21	True	TATAAA	-45	NA	59688862	59663756	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_59664121_59668891_59668991_59669275_59669363_59671182_59671315_59672636_59672740_59677910_59678088_59679591_59679769_59680240_59680309_59682407_59682515_59688731
H1_mix_00029668	chr15	-	832	5	FSM	ENSG00000140299.13	ENST00000560458.5	832	5	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_4	17.8518206354422	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAACACAGGCGCTAGGT	-21	True	NA	NA	False	AGTAAA	-11	NA	59689339	59677812	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_59678088_59679591_59679769_59680240_59680309_59682407_59682515_59689134
H1_mix_00029669	chr15	-	1573	13	FSM	ENSG00000182718.18	ENST00000559818.6	1615	13	50	-8	50	-2	multi-exon	FALSE	canonical	1	11	junction_12	837.670015910535	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCACATTTCGAATGCTC	4200	False	NA	-6	True	AATAAA	-30	NA	60398692	60347135	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60398644
H1_mix_00029670	chr15	-	1747	11	FSM	ENSG00000182718.18	ENST00000559647.2	1747	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_9	862.260030385266	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTACTTTGTGGCCCTGCTT	0	True	NA	-5	True	AATAAA	-23	NA	60397986	60347329	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_60347690_60349074_60349198_60351192_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60386027_60386087_60397942
H1_mix_00029671	chr15	-	1938	12	FSM	ENSG00000182718.18	ENST00000678796.1	1938	12	0	0	0	0	multi-exon	FALSE	canonical	3	2478	junction_11	219.061257895466	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTACTTTGTGGCCCTGCTT	4815	False	NA	-5	True	AATAAA	-23	NA	60398077	60347329	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_60347690_60349074_60349198_60351192_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60397942
H1_mix_00029674	chr15	-	2824	11	NNC	ENSG00000128915.12	novel	7206	16	NA	NA	0	8864	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	106.309924278028	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGCTCGGTGGCTTACA	2261	False	NA	NA	False	AAAAAG	-1	NA	60455442	60410744	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_60410773_60423120_60423763_60428428_60428688_60431933_60431985_60436142_60436228_60442415_60442546_60447969_60448146_60448847_60449842_60453602_60453785_60455002_60455163_60455325
H1_mix_00029676	chr15	-	3796	9	FSM	ENSG00000128915.12	ENST00000561114.5	3796	9	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_6	50.2885424326456	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTATCATGGATTTTC	0	True	NA	NA	False	AATAAA	-16	NA	60479073	60451094	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_60453785_60455002_60455163_60455325_60455443_60456656_60456795_60466593_60466714_60468060_60468323_60476062_60476168_60477936_60478070_60479002
H1_mix_00029680	chr15	-	10577	10	ISM	ENSG00000069667.16	ENST00000335670.11	10827	11	550616	0	27666	0	3prime_fragment	FALSE	canonical	0	0	junction_9	9.79795897113271	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTTGCCTTGTTTTTCTTC	NA	False	NA	-1	True	AATAAA	-20	NA	60678686	60488283	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_60497620_60499891_60500005_60500958_60501070_60502759_60502868_60503534_60503668_60505507_60505630_60511225_60511622_60514615_60514758_60531765_60531852_60678656
H1_mix_00029681	chr15	-	2645	3	NNC	ENSG00000069667.16	novel	10827	11	NA	NA	-32	-42444	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	3	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAATCATTTTTTCTT	143	False	NA	NA	False	NA	NA	NA	61229334	61218511	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_61220803_61221038_61221111_61229052
H1_mix_00029682	chr15	-	7864	39	ISM	ENSG00000129003.19	ENST00000644861.2	13403	85	119651	15	17857	0	3prime_fragment	FALSE	canonical	3	12	junction_34	14.5509183344809	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGGTGTGAAAACTTTG	NA	False	NA	-12	True	AATAAA	-17	NA	61940796	61852403	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_61854559_61854870_61854955_61856285_61856410_61863439_61863529_61868658_61868774_61869499_61869624_61871988_61872035_61873245_61873410_61874875_61874952_61875731_61875846_61876972_61877055_61878606_61878747_61880608_61880723_61880842_61880955_61881562_61881633_61881746_61881829_61882595_61882737_61884127_61884270_61890164_61890401_61907263_61907391_61908991_61909126_61910176_61910306_61911839_61912005_61913310_61913416_61915632_61916023_61917340_61917636_61918135_61918258_61919288_61919450_61920066_61920332_61920497_61920648_61921946_61922034_61922396_61922763_61925455_61925549_61927090_61927321_61929500_61929749_61931089_61931260_61934218_61934332_61936596_61936751_61940646
H1_mix_00029685	chr15	-	4233	36	ISM	ENSG00000129003.19	ENST00000395898.3	11012	80	-12	86700	-12	-2584	5prime_fragment	FALSE	canonical	2	6	junction_32	3.38351344984856	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTGAATTTTGAAATTAAA	6	True	NA	NA	False	AAGAAA	-28	NA	62060460	61954443	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_61954555_61958607_61958717_61959447_61959596_61961588_61961894_61962370_61962539_61962748_61962853_61963834_61963952_61964698_61964862_61966082_61966143_61967367_61967448_61969298_61969453_61972624_61972765_61973453_61973533_61974287_61974418_61977081_61977200_61978625_61978750_61981341_61981479_61982458_61982574_61983819_61984013_61984856_61985000_61990999_61991095_61991672_61991803_62000563_62000627_62007307_62007480_62008654_62008762_62010471_62010600_62012106_62012165_62013038_62013120_62013932_62013993_62020478_62020539_62023410_62023521_62033440_62033543_62034956_62035053_62041323_62041367_62044211_62044256_62060274
H1_mix_00029686	chr15	-	507	4	FSM	ENSG00000129003.19	ENST00000561258.1	614	4	0	107	0	-107	multi-exon	FALSE	canonical	3	12	junction_1	2.35702260395516	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTGCAAGGAGAAAGTA	NA	False	NA	NA	False	NA	NA	NA	61991748	61983819	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_61984013_61984856_61985000_61990999_61991095_61991672
H1_mix_00029687	chr15	-	3419	1	FSM	ENSG00000259498.1	ENST00000561241.1	3354	1	48	-113	48	113	mono-exon	FALSE	NA	NA	NA	NA	NA	897	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATGTGATCAATACACTA	7777	False	NA	NA	False	NA	NA	NA	63049339	63045920	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_63045900_63049300
H1_mix_00029688	chr15	-	970	3	FSM	ENSG00000185088.14	ENST00000439025.1	970	3	0	0	0	0	multi-exon	FALSE	canonical	3	2395	junction_2	39.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCTTTTACAAAATTTT	-2	True	NA	NA	False	TTTAAA	-18	NA	63157499	63154970	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_63155732_63156412_63156522_63157399
H1_mix_00029689	chr15	-	430	3	FSM	ENSG00000074410.14	ENST00000558287.1	561	3	0	131	0	-131	multi-exon	FALSE	canonical	3	13	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTGAAAGCACCGCAGAA	NA	False	NA	NA	False	NA	NA	NA	63342074	63340152	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_63340446_63340719_63340784_63342001
H1_mix_00029690	chr15	-	11340	60	NNC	ENSG00000103657.14	novel	15197	78	NA	NA	0	2	intron_retention	FALSE	canonical	0	0	junction_33	29.5327979271215	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTCTTGGTATTGCTTC	5681	False	NA	-3	True	AATAAA	-21	NA	63723257	63608615	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_63609267_63612250_63612557_63615767_63615921_63616429_63616683_63622814_63622892_63623724_63623891_63624157_63624328_63625984_63626155_63628676_63628816_63630465_63630636_63632708_63632812_63633847_63633971_63634732_63634889_63635960_63636143_63637504_63637644_63638410_63638537_63638710_63638777_63640151_63640446_63641469_63641644_63642956_63643059_63643403_63643551_63644991_63645098_63645482_63645683_63648068_63648200_63649724_63649926_63651252_63651381_63652413_63652542_63654118_63654325_63655741_63655956_63656087_63656359_63658543_63658719_63659735_63659937_63660972_63661026_63661752_63662022_63663004_63663205_63664469_63664595_63665918_63666151_63666355_63666473_63669537_63669699_63672495_63672695_63674341_63675094_63677844_63678366_63680076_63680161_63680536_63680777_63686358_63686536_63689588_63689700_63690540_63690648_63692410_63692567_63693963_63694158_63694311_63694550_63694773_63694895_63696123_63696340_63698727_63698997_63706779_63706832_63712774_63712896_63713352_63713666_63716301_63716474_63718573_63718695_63718782_63718898_63723181
H1_mix_00029691	chr15	-	15159	78	FSM	ENSG00000103657.14	ENST00000443617.7	15197	78	40	-2	7	2	multi-exon	FALSE	canonical	0	0	junction_33	30.0204517907548	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTCTTGGTATTGCTTC	80	False	NA	-3	True	AATAAA	-21	NA	63833908	63608615	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_63609267_63612250_63612557_63615767_63615921_63616429_63616683_63622814_63622892_63623724_63623891_63624157_63624328_63625984_63626155_63628676_63628816_63630465_63630636_63632708_63632812_63633847_63633971_63634732_63634889_63635960_63636143_63637504_63637644_63638410_63638537_63638710_63638777_63640151_63640446_63641469_63641644_63642956_63643059_63643403_63643551_63644991_63645098_63645482_63645683_63648068_63648200_63649724_63649926_63651252_63651381_63652413_63652542_63654118_63654325_63655741_63655956_63656087_63656359_63658543_63658719_63659735_63659937_63660972_63661026_63661752_63662022_63662983_63663205_63664469_63664595_63665918_63666151_63666355_63666473_63669537_63669699_63672495_63672695_63674341_63675118_63677844_63678366_63680076_63680161_63680536_63680777_63686358_63686536_63689588_63689700_63690540_63690648_63692410_63692567_63693963_63694158_63694311_63694550_63694773_63694895_63696123_63696340_63698727_63698997_63706779_63706832_63712774_63712896_63713352_63713666_63716301_63716474_63718573_63718695_63718782_63718898_63723181_63723356_63725291_63725514_63727646_63727839_63729235_63729369_63729496_63729650_63732923_63733146_63734723_63734850_63746917_63747084_63747723_63747859_63749366_63749539_63749646_63749792_63752957_63753086_63754504_63754649_63755228_63755326_63756436_63756749_63758174_63758370_63764095_63764192_63774693_63775650_63833826
H1_mix_00029692	chr15	-	443	2	FSM	ENSG00000103657.14	ENST00000559996.1	443	2	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGACAGACAGGTGAGAT	NA	False	NA	NA	False	NA	NA	NA	63616732	63615780	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_63615921_63616429
H1_mix_00029693	chr15	-	1191	7	NNC	ENSG00000166794.6	novel	1050	6	NA	NA	-134	96849	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2540.56607865255	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGACATTCTCCCCTAT	NA	False	NA	NA	False	AAAAAG	-3	NA	64163268	64058890	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_64058919_64102761_64102787_64155817_64156146_64156724_64156910_64160103_64160198_64162040_64162155_64162851
H1_mix_00029697	chr15	-	587	3	FSM	ENSG00000166803.14	ENST00000558043.5	689	3	116	-14	116	0	multi-exon	FALSE	canonical	3	1267	junction_2	96	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTGAGATTTGCTTAGA	9917	False	NA	35	True	NA	NA	NA	64381039	64365733	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_64366076_64376742_64376906_64380957
H1_mix_00029699	chr15	-	1599	9	FSM	ENSG00000090487.11	ENST00000433215.6	1613	9	13	1	13	-1	multi-exon	FALSE	canonical	2	2	junction_8	255.313410341094	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGAGTCGCTTTTGTGAT	-1	True	NA	-8	True	AATAAA	-11	NA	64989461	64963027	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_64963737_64965319_64965461_64969254_64969363_64970113_64970223_64974601_64974748_64976474_64976556_64980863_64981026_64983506_64983594_64989405
H1_mix_00029705	chr15	-	1210	7	NNC	ENSG00000103707.10	novel	2746	9	NA	NA	1	-2977	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_6	82.6895129720544	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATTGTCTTATTCTTTGC	-13	True	NA	NA	False	NA	NA	NA	65029638	65005972	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_65006192_65016435_65016528_65020196_65020273_65021513_65021617_65023671_65023795_65026830_65027041_65029251
H1_mix_00029707	chr15	-	310	1	FSM	ENSG00000277351.1	ENST00000612943.1	615	1	265	40	265	-40	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAACTATTAATAATAAACTG	NA	False	NA	-45	True	GATAAA	-32	NA	65049537	65049227	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_65049200_65049500
H1_mix_00029708	chr15	-	7135	2	FSM	ENSG00000246922.10	ENST00000561387.1	7377	2	245	-3	245	3	multi-exon	FALSE	canonical	3	13	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAGTGATGCATACTTA	4930	False	NA	NA	False	ATTAAA	-14	NA	65101383	65093005	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_65093232_65094474
H1_mix_00029709	chr15	-	3329	3	NIC	ENSG00000090470.15	novel	2823	5	NA	NA	282	-1	intron_retention	FALSE	canonical	3	106	junction_1	4.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGTGCCTTTGCTGCCA	320	False	NA	-1	True	AATAAA	-18	NA	65133526	65117379	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_65119955_65129031_65129171_65132911
H1_mix_00029710	chr15	-	3975	15	NNC	ENSG00000166855.9	novel	4695	14	NA	NA	-59	5	at_least_one_novel_splicesite	FALSE	non_canonical	1	3	junction_1	69.8936509919148	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGTGGTGTGTCCATACA	237	False	NA	NA	False	AATAAA	-25	NA	65185401	65148213	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_65149580_65150363_65150914_65152429_65152537_65153546_65153640_65154781_65155082_65155691_65155857_65156843_65156933_65157745_65157911_65158574_65158752_65162603_65162646_65164028_65164189_65166630_65166786_65178933_65179052_65180043_65180205_65185074
H1_mix_00029711	chr15	-	1466	9	FSM	ENSG00000166855.9	ENST00000558958.1	1493	9	0	27	0	-27	multi-exon	FALSE	canonical	3	208	junction_3	17.6878312689826	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGAAGTAGTTTAGATC	-11	True	NA	NA	False	NA	NA	NA	65185342	65156712	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_65156933_65157745_65157911_65158574_65158752_65162603_65162646_65164028_65164189_65166630_65166786_65178933_65179052_65180043_65180205_65185074
H1_mix_00029712	chr15	-	4365	13	NIC	ENSG00000174498.14	novel	4441	14	NA	NA	-62	0	combination_of_known_splicesites	FALSE	canonical	2	12	junction_9	73.0450774065805	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGTTTTTGGGTGGTT	4443	False	NA	-6	True	AATAAA	-21	NA	65378064	65327126	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_65329149_65329389_65329598_65329725_65329865_65330292_65330398_65330549_65330742_65331049_65331215_65331411_65331660_65331940_65332107_65333256_65333416_65335290_65335422_65335811_65335957_65375096_65375403_65377685
H1_mix_00029713	chr15	-	7421	20	NNC	ENSG00000103742.12	novel	6363	20	NA	NA	-1453	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	10.2308533422586	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCTCTTTTGGAACCAT	NA	False	NA	-22	True	AATAAA	-19	NA	65412538	65381479	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_65384420_65384953_65385116_65385830_65386060_65386550_65386657_65388448_65388587_65388807_65388979_65389283_65389412_65390154_65390339_65391879_65391982_65392133_65392371_65393360_65393532_65394410_65394549_65394625_65394667_65395093_65395259_65395749_65396164_65396833_65396990_65400805_65400947_65402350_65402488_65410177_65410320_65411019
H1_mix_00029714	chr15	-	7213	20	FSM	ENSG00000074603.19	ENST00000341861.9	8699	20	1482	4	13	0	multi-exon	FALSE	canonical	3	15	junction_19	12.2451867416528	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTAAGTGTTCCTTTT	1921	False	NA	-3	True	AATAAA	-18	NA	65515791	65442466	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_65447007_65450998_65451111_65451959_65452103_65454262_65454416_65456224_65456372_65463760_65463907_65466677_65466814_65467070_65467224_65474208_65474289_65478879_65479040_65480221_65480400_65481514_65481616_65485098_65485161_65487689_65487819_65490188_65490300_65497863_65498033_65500605_65500780_65507242_65507356_65512294_65512565_65515655
H1_mix_00029715	chr15	-	3125	20	FSM	ENSG00000074603.19	ENST00000321147.10	3125	20	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	16.9311789295547	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACATTAGCACCATGT	8	False	NA	NA	False	ACTAAA	-14	NA	65517704	65446620	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_65447007_65450998_65451111_65451959_65452103_65456224_65456372_65463760_65463907_65466677_65466814_65467070_65467224_65474208_65474289_65478879_65479040_65480221_65480400_65481514_65481616_65485098_65485161_65487689_65487819_65490188_65490300_65497863_65498033_65500605_65500780_65507242_65507356_65512294_65512565_65515655_65515792_65517485
H1_mix_00029716	chr15	-	906	4	FSM	ENSG00000074603.19	ENST00000558529.1	906	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	4.54606056566195	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGATTGCTTTTATACAT	4881	False	NA	NA	False	NA	NA	NA	65512831	65497950	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_65498033_65500605_65500780_65507242_65507356_65512294
H1_mix_00029717	chr15	-	561	3	FSM	ENSG00000074603.19	ENST00000560194.1	561	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	23.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCTTTTGTTTTTTT	7	True	NA	1	True	AATAAA	-26	NA	65517628	65511960	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_65512109_65512294_65512565_65517485
H1_mix_00029718	chr15	-	564	2	FSM	ENSG00000074603.19	ENST00000560665.1	564	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTGGTGAGTACGAAGT	-6	True	NA	NA	False	NA	NA	NA	65517681	65512301	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_65512565_65517380
H1_mix_00029719	chr15	-	2310	13	NNC	ENSG00000138614.16	novel	2304	12	NA	NA	0	39543	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	91.9424261275621	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTCACTGAACATTCTC	4	True	NA	NA	False	AAAAAG	-1	NA	65611131	65539209	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_65539238_65578778_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593573_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605237_65607158_65607443_65611097
H1_mix_00029724	chr15	-	792	1	FSM	ENSG00000259924.1	ENST00000567680.1	964	1	159	13	159	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATAAAGGAGGATGAACT	9866	False	NA	NA	False	NA	NA	NA	65771980	65771188	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_65771200_65772000
H1_mix_00029725	chr15	-	3839	25	NIC	ENSG00000157890.19	novel	864	6	NA	NA	-60	1	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	3.42681419915868	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTTTGCATACTGTAAA	NA	False	NA	-17	True	AATAAA	-16	NA	66253816	65905272	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_65905837_65906084_65906142_65909033_65909136_65909739_65909807_65912081_65912201_65913736_65913974_65915469_65915599_65916147_65916277_65916827_65916957_65917965_65918095_65922337_65922473_65922822_65922970_65928424_65928528_65929719_65929884_65930822_65930944_65957546_65957722_65964907_65965121_65970552_65970690_65980777_65980899_65982241_65982489_66094401_66094495_66119085_66119187_66123898_66124001_66128305_66128412_66253604
H1_mix_00029733	chr15	-	1081	9	ISM	ENSG00000174444.15	ENST00000307961.11	2741	10	22	2041	0	0	5prime_fragment	FALSE	canonical	3	8802	junction_6	661.968843677707	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGGAGTTTTTGTTTG	739	False	NA	81	True	NA	NA	NA	66504833	66500055	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_66500177_66500292_66500377_66500948_66501106_66501374_66501505_66501787_66501913_66502611_66502751_66503057_66503165_66503357_66503530_66504787
H1_mix_00029738	chr15	-	3238	4	FSM	ENSG00000260007.3	ENST00000637054.1	3238	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	34.1857670188438	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTTATACAAACTGACAT	25	True	NA	-16	True	AATAAA	-15	NA	68229677	68191354	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_68194113_68197439_68197629_68218535_68218651_68229501
H1_mix_00029739	chr15	-	4285	10	Fusion	ENSG00000129007.16_ENSG00000128973.13	novel	2228	7	NA	NA	0	0	multi-exon	FALSE	canonical	3	10	junction_3	30.3441169273183	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACAGCCTGGGTCCTGTC	25	True	NA	NA	False	NA	NA	NA	68229677	68197439	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr15_-_68197629_68199540_68199682_68205120_68205152_68205244_68208411_68209636_68209760_68211262_68211319_68211674_68211864_68214289_68214389_68218535_68218651_68229501
H1_mix_00029743	chr15	-	2127	8	NNC	ENSG00000140350.15	novel	2440	7	NA	NA	-25	21298	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1045.65678998846	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTGGATATTGCTCTGT	1	True	NA	NA	False	NA	NA	NA	68820922	68757236	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_68757269_68778906_68780143_68780409_68780474_68782955_68783054_68784396_68784596_68787412_68787536_68787769_68787920_68820697
H1_mix_00029744	chr15	-	3449	7	FSM	ENSG00000140350.15	ENST00000483551.6	3711	7	262	0	262	0	multi-exon	FALSE	canonical	2	4	junction_6	1094.37065882126	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTATTTTGAAAAATTCCTA	NA	False	NA	NA	False	NA	NA	NA	68791986	68780071	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_68780143_68780409_68780474_68782955_68783054_68784396_68784596_68787412_68787536_68787769_68787920_68789242
H1_mix_00029745	chr15	-	352	2	FSM	ENSG00000140350.15	ENST00000480858.2	352	2	0	0	0	0	multi-exon	FALSE	canonical	3	3118	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCTGGGGAGGCTGGAT	NA	False	NA	NA	False	NA	NA	NA	68784466	68782771	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_68783054_68784396
H1_mix_00029748	chr15	-	2918	19	FSM	ENSG00000140332.18	ENST00000559048.5	2918	19	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_14	49.4694069321861	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGCTCATGAGTCTCTGTT	2927	False	NA	1	True	AATAGA	-37	NA	70096604	70049798	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_70050205_70051390_70051468_70052373_70052525_70053226_70053375_70054437_70054686_70055048_70055299_70056297_70056375_70057473_70057659_70058149_70058292_70058662_70058816_70059409_70059461_70060529_70060650_70064453_70064471_70066013_70066216_70074532_70074608_70076095_70076159_70094531_70094577_70095577_70095642_70096160
H1_mix_00029752	chr15	-	2071	4	NNC	ENSG00000166173.11	novel	4467	3	NA	NA	0	17347	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	36.9954952212653	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGAACATAGTGAGTTCA	9	True	NA	NA	False	NA	NA	NA	70854157	70811782	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_70811810_70831552_70833117_70836294_70836506_70853888
H1_mix_00029753	chr15	-	1922	4	NNC	ENSG00000166173.11	novel	4467	3	NA	NA	0	12903	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	36.9954952212653	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGTTGGAAATAGTAACAA	738	False	NA	NA	False	NA	NA	NA	70854008	70816226	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_70816254_70831552_70833117_70836294_70836506_70853888
H1_mix_00029757	chr15	-	992	4	FSM	ENSG00000175318.12	ENST00000565233.5	1024	4	32	0	32	0	multi-exon	FALSE	canonical	2	6	junction_2	1.69967317119759	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTGGGCAGGGGCCTGC	6707	False	NA	NA	False	NA	NA	NA	72163757	72161481	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_72162013_72162272_72162378_72163265_72163477_72163612
H1_mix_00029758	chr15	-	488	6	FSM	ENSG00000175318.12	ENST00000568594.5	623	6	135	0	135	0	multi-exon	FALSE	canonical	1	6	junction_2	5.11468474101777	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCCACCTACAGGTATGG	6497	False	NA	NA	False	NA	NA	NA	72169939	72166645	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_72166704_72166993_72167093_72167735_72167840_72168490_72168567_72168938_72168997_72169846
H1_mix_00029759	chr15	-	2735	12	NNC	ENSG00000067225.20	novel	2305	11	NA	NA	35	20468	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3806.2350826154	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACAGCAATAATGACATT	1	True	NA	NA	False	AAAAAG	-8	NA	72231589	72178560	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_72178594_72199030_72199757_72200473_72200656_72202453_72202621_72206727_72206881_72207126_72207278_72208620_72208892_72209672_72209860_72210346_72210479_72217408_72217501_72218943_72219111_72231115
H1_mix_00029763	chr15	-	2148	21	FSM	ENSG00000137817.17	ENST00000260376.11	2142	21	0	-6	0	5	multi-exon	TRUE	canonical	3	29	junction_13	43.4883892550644	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTGGTTTGACTAGCC	5484	False	NA	-1	True	AATAAA	-36	NA	72267523	72241175	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_72241558_72241900_72241986_72242156_72242221_72242619_72242700_72250019_72250093_72250844_72250955_72251206_72251256_72253436_72253505_72254454_72254521_72256464_72256591_72257347_72257441_72258036_72258133_72259607_72259662_72260477_72260689_72261557_72261708_72264554_72264622_72265080_72265172_72265412_72265474_72265896_72265992_72266744_72266823_72267474
H1_mix_00029765	chr15	-	3676	4	FSM	ENSG00000137817.17	ENST00000566991.5	3657	4	0	-19	0	0	multi-exon	FALSE	canonical	3	192	junction_2	14.3836326735943	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTGCTGTGGACTGGATA	NA	False	NA	-24	True	AATAAA	-13	NA	72245787	72241198	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_72241558_72241900_72241986_72242156_72242221_72242619
H1_mix_00029767	chr15	-	3946	22	NIC	ENSG00000137817.17	novel	2625	23	NA	NA	156	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	46.2830687074614	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTCCACATTCGGATGGC	164	False	NA	-112	True	NA	NA	NA	72272843	72241286	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_72241558_72241900_72241986_72242156_72242221_72242619_72242700_72250019_72250093_72250844_72250955_72251206_72251256_72253436_72253505_72254454_72254521_72256464_72256591_72257347_72257441_72258036_72258133_72259607_72259662_72260537_72260689_72261557_72261708_72264554_72264622_72265080_72265172_72265412_72265474_72265896_72265992_72266744_72266823_72267474_72267672_72271022
H1_mix_00029773	chr15	-	2545	16	FSM	ENSG00000213614.11	ENST00000684667.1	2544	16	0	-1	0	0	multi-exon	FALSE	canonical	0	0	junction_14	161.436963962202	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATATTGTTCTCTAGGCA	14	True	NA	-33	True	ATTAAA	-1	NA	72375972	72343452	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_72344141_72345445_72345551_72346234_72346326_72346526_72346711_72347685_72347759_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72353690_72353738_72355558_72355625_72355909_72355977_72356524_72356618_72370430_72370695_72375719
H1_mix_00029784	chr15	-	4581	2	FSM	ENSG00000159322.18	ENST00000562621.1	4576	2	0	-5	0	2	multi-exon	FALSE	canonical	3	134	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTCTGTAATTGATTTT	NA	False	NA	-10	True	ATTAAA	-21	NA	72758610	72751366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_72752893_72755555
H1_mix_00029785	chr15	-	2394	6	NIC	ENSG00000159322.18	novel	2608	7	NA	NA	33	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_4	94.810126041473	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGTCTGTAATTGATT	52	False	NA	-12	True	ATTAAA	-19	NA	72783682	72751368	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_72752896_72755555_72755655_72756250_72756448_72760406_72760528_72774871_72775098_72783458
H1_mix_00029786	chr15	-	2333	6	NIC	ENSG00000159322.18	novel	2557	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_2	95.2860955229041	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGTCTGTAATTGATT	-24	True	NA	-12	True	ATTAAA	-19	NA	72783758	72751368	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_72752893_72755555_72755655_72760406_72760528_72771782_72771846_72774871_72775098_72783458
H1_mix_00029791	chr15	-	598	2	FSM	ENSG00000205363.7	ENST00000558834.1	598	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAACTAGGGGCCGGGGA	NA	False	NA	NA	False	NA	NA	NA	73740615	73739926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_73740477_73740567
H1_mix_00029793	chr15	-	1864	6	FSM	ENSG00000067221.14	ENST00000316911.10	1891	6	39	-12	9	0	multi-exon	FALSE	canonical	3	6	junction_4	7.2	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAAGCGGGGCTCCTGGGG	-17	True	NA	2	True	AATAAA	-32	NA	73992309	73983205	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_73984131_73984658_73984872_73985317_73985514_73988598_73988803_73990350_73990458_73992090
H1_mix_00029794	chr15	-	509	2	FSM	ENSG00000067221.14	ENST00000567876.1	597	2	0	88	0	-88	multi-exon	FALSE	canonical	3	22	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGATCTGGACACTGGC	-19	True	NA	NA	False	NA	NA	NA	73992256	73990114	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_73990458_73992090
H1_mix_00029802	chr15	-	1558	11	NNC	ENSG00000138629.16	novel	1720	11	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_10	207.34705206489	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTGTCCAGTTCTTGA	56	False	NA	-6	True	AATATA	-18	NA	74461097	74445976	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_74446228_74448477_74448601_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74460824
H1_mix_00029804	chr15	-	3797	8	NIC	ENSG00000179151.13	novel	3810	9	NA	NA	6	1	combination_of_known_junctions	FALSE	canonical	3	15	junction_7	132.101074475384	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGCCGTGTGACTTGC	25	True	NA	-1	True	AATAAA	-19	NA	74695994	74630556	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_74632947_74635408_74635627_74640465_74640620_74655732_74656069_74671454_74671775_74674960_74675143_74676940_74677023_74695879
H1_mix_00029805	chr15	-	967	5	FSM	ENSG00000179151.13	ENST00000563009.5	967	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	150.470096696985	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCCATTGTCTATCGACG	32	False	NA	NA	False	AATGAA	-43	NA	74695987	74655793	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74656069_74671454_74671775_74674960_74675143_74676940_74677023_74695879
H1_mix_00029810	chr15	-	2478	7	FSM	ENSG00000140497.16	ENST00000566480.5	2476	7	0	-2	0	0	multi-exon	FALSE	canonical	3	456	junction_2	15.2178623115513	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGGTCCACATGTCTGGT	NA	False	NA	-7	True	AATAAA	-16	NA	74854586	74843729	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_74845594_74848599_74848702_74850513_74850674_74851352_74851482_74852068_74852187_74854020_74854120_74854580
H1_mix_00029816	chr15	-	765	6	NIC	ENSG00000178761.15	novel	865	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	74.2536194404017	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGAGCTGTGTCTGTGTTG	4	True	NA	-11	True	AATAAA	-14	NA	74906807	74899991	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_74900138_74902603_74902787_74904663_74904713_74905153_74905232_74906277_74906366_74906586
H1_mix_00029821	chr15	-	1493	2	Genic_Genomic	ENSG00000178718.7	novel	2355	1	NA	NA	0	4349	multi-exon	TRUE	non_canonical	0	0	junction_1	0	20	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATAGTTGGATGTGGTG	-3	True	NA	NA	False	NA	NA	NA	74956772	74950068	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr15_-_74950094_74955304
H1_mix_00029822	chr15	-	653	1	FSM	ENSG00000275645.1	ENST00000617892.1	418	1	-193	-42	-193	42	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGATTTGTCTAATTTAC	NA	False	NA	NA	False	AAGAAA	-43	NA	75347354	75346701	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_75346700_75347400
H1_mix_00029825	chr15	-	3273	26	NIC	ENSG00000140400.18	novel	3261	26	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	49.2445976732474	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTCAGTCCCCTT	20	True	NA	-5	True	AATAAA	-16	NA	75368580	75355791	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_75356033_75356109_75356220_75356300_75356450_75356605_75356686_75356792_75356903_75358200_75358345_75358461_75358619_75358703_75358809_75359058_75359154_75359327_75359426_75359619_75359776_75359902_75359989_75360089_75360212_75360564_75360689_75361045_75361192_75361285_75361382_75361603_75361721_75361854_75362026_75362342_75362454_75362641_75362749_75363998_75364189_75364487_75364666_75366521_75366593_75367510_75367635_75368072_75368160_75368482
H1_mix_00029826	chr15	-	3300	26	FSM	ENSG00000140400.18	ENST00000565683.5	3300	26	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_10	48.7451495022838	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTCAGTCCCCTT	5	True	NA	-5	True	AATAAA	-16	NA	75368595	75355791	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_75356033_75356109_75356220_75356300_75356450_75356605_75356686_75356792_75356903_75358200_75358345_75358461_75358619_75358703_75358809_75359058_75359192_75359327_75359439_75359619_75359776_75359902_75359989_75360089_75360212_75360564_75360689_75361045_75361192_75361285_75361382_75361603_75361721_75361854_75361948_75362342_75362454_75362641_75362749_75363998_75364189_75364487_75364666_75366521_75366593_75367510_75367635_75368072_75368199_75368482
H1_mix_00029840	chr15	-	688	1	FSM	ENSG00000276744.1	ENST00000617588.1	984	1	234	62	234	-62	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCAGCGTCAGGCCCAC	2488	False	NA	-64	True	NA	NA	NA	75453713	75453025	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_75453000_75453700
H1_mix_00029841	chr15	-	1493	9	NIC	ENSG00000169371.14	novel	1420	9	NA	NA	98	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_8	87.07037383634	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGGTTTGTGGTTCTTA	93	False	NA	NA	False	AATATA	-17	NA	75626371	75598085	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_75598682_75601137_75601219_75605149_75605228_75607215_75607314_75609557_75609652_75609889_75609995_75617407_75617553_75620893_75621057_75626238
H1_mix_00029842	chr15	-	920	6	FSM	ENSG00000169371.14	ENST00000568078.5	920	6	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_1	24.9767892251987	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTCCCTGGTTTGGCTGT	8940	False	NA	NA	False	NA	NA	NA	75617524	75600790	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_75601219_75605149_75605228_75607215_75607314_75609557_75609652_75609889_75609995_75617407
H1_mix_00029848	chr15	-	2398	19	FSM	ENSG00000140386.13	ENST00000564590.5	2507	19	109	0	2	0	multi-exon	FALSE	canonical	1	7	junction_9	7.79224844332296	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAGAAAAGAAAAAGCT	9	True	NA	NA	False	NA	NA	NA	76905335	76702965	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_76703003_76705902_76705985_76728594_76728738_76733228_76733385_76753807_76753949_76764960_76765073_76765336_76765455_76765562_76765639_76766917_76767089_76771723_76771955_76774854_76775118_76795279_76795441_76800247_76800365_76804532_76804634_76841733_76841932_76857808_76857880_76862415_76862534_76883811_76883877_76905298
H1_mix_00029849	chr15	-	2892	4	FSM	ENSG00000140391.15	ENST00000560715.5	2892	4	0	0	0	0	multi-exon	FALSE	canonical	3	1539	junction_3	86.9495383669299	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATATTATTTTTCATTAT	NA	False	NA	-5	True	AATAAA	-17	NA	77055934	77046029	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_77046928_77052384_77052469_77052776_77052930_77054177
H1_mix_00029850	chr15	-	1530	6	FSM	ENSG00000140391.15	ENST00000424443.7	1530	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	659.303571960595	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATATTATTTTTCATTAT	22	True	NA	-5	True	AATAAA	-17	NA	77071109	77046029	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_77046928_77052384_77052469_77052776_77052930_77054177_77054280_77055788_77055864_77070891
H1_mix_00029854	chr15	-	734	1	FSM	ENSG00000269951.1	ENST00000602975.1	672	1	-147	85	-147	-85	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGTACATTAAAAAATGTT	2703	False	NA	NA	False	NA	NA	NA	77068472	77067738	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_77067700_77068500
H1_mix_00029855	chr15	-	2960	14	NNC	ENSG00000167202.12	novel	6126	13	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	16.570809152734	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCATTGAAATTCAGTT	17	True	NA	-10	True	AATAAA	-19	NA	78077676	77994984	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_77995064_77998194_77998356_78001618_78001741_78003304_78003491_78008996_78009115_78012822_78013318_78016545_78016740_78017846_78017958_78024155_78024540_78025258_78025498_78030006_78030171_78044899_78045069_78054033_78054188_78077292
H1_mix_00029857	chr15	-	773	7	FSM	ENSG00000140395.9	ENST00000560807.5	789	7	0	16	0	-16	multi-exon	FALSE	canonical	2	4	junction_1	350.685835977953	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGAAGGAAATGGATTTC	9706	False	NA	-20	True	NA	NA	NA	78290029	78277850	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_78278091_78278207_78278302_78285260_78285340_78286040_78286134_78288288_78288383_78289618_78289713_78289950
H1_mix_00029858	chr15	-	1071	1	FSM	ENSG00000140395.9	ENST00000559940.1	3629	1	2561	-3	1598	3	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTCCTTGAACATGCTT	NA	False	NA	-3	True	CATAAA	-20	NA	78284302	78283231	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_78283200_78284300
H1_mix_00029859	chr15	-	1064	2	FSM	ENSG00000140395.9	ENST00000561347.1	1131	2	67	0	0	0	multi-exon	FALSE	canonical	3	565	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCATGATAGGTTGGGGA	-1	True	NA	NA	False	AAAAAG	-4	NA	78299636	78294736	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_78295726_78299561
H1_mix_00029861	chr15	-	2596	6	FSM	ENSG00000117971.12	ENST00000261751.8	2596	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	2.56124969497314	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGGCTCCTACCCCTCC	0	True	NA	NA	False	AATAAA	-16	NA	78641210	78624110	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_78625292_78628966_78629946_78631075_78631186_78631287_78631333_78635438_78635588_78641078
H1_mix_00029863	chr15	-	708	2	FSM	ENSG00000136378.15	ENST00000569934.1	708	2	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTACACATCTTCCTGGA	NA	False	NA	NA	False	NA	NA	NA	78765113	78763950	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_78764100_78764554
H1_mix_00029865	chr15	-	238	1	FSM	ENSG00000243711.1	ENST00000482506.1	483	1	-48	293	-48	-293	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATAATGTCCCCCAGCAT	9553	False	NA	NA	False	AAAAAG	-40	NA	78863777	78863539	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_78863500_78863800
H1_mix_00029866	chr15	-	1524	13	FSM	ENSG00000103811.18	ENST00000679172.1	1524	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	63.340514943702	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATGGAGCATGCTGGTC	25	True	NA	-34	True	AATAAA	-19	NA	78945003	78921773	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_78922206_78922992_78923119_78925333_78925441_78927712_78927782_78929411_78929494_78931450_78931507_78932371_78932459_78934977_78935083_78935679_78935751_78937317_78937424_78937685_78937824_78939139_78939172_78944890
H1_mix_00029868	chr15	-	2680	3	FSM	ENSG00000103811.18	ENST00000527138.6	5163	3	744	1739	267	-1405	multi-exon	FALSE	canonical	3	175	junction_1	8.5	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAGGCAAAAGGCTGTAC	5612	False	NA	NA	False	NA	NA	NA	78931786	78925519	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_78927782_78929411_78929494_78931450
H1_mix_00029870	chr15	-	859	4	FSM	ENSG00000259332.3	ENST00000479961.1	859	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	344.907072831058	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAAATAATCAGTGTTTTA	-32	True	NA	NA	False	NA	NA	NA	79923744	79845194	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_79845443_79889092_79889355_79907628_79907685_79923451
H1_mix_00029872	chr15	-	407	3	NNC	ENSG00000180953.11	novel	1004	3	NA	NA	638	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_2	195	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTATATGCCATTTTTGTC	648	False	NA	-9	True	AATAAA	-15	NA	79923064	79898846	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_79899126_79907628_79907685_79922992
H1_mix_00029873	chr15	-	533	3	NNC	ENSG00000180953.11	novel	529	3	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_2	195.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCCAGAGTTACAGAAAT	21	True	NA	-28	True	AATAAA	-23	NA	79923691	79898903	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_79899126_79907628_79907685_79923436
H1_mix_00029879	chr15	-	4436	1	FSM	ENSG00000183496.6	ENST00000558133.1	4333	1	-94	-9	-94	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGTGGTGACTTTTTT	NA	False	NA	57	True	AATAAA	-19	NA	82046213	82041777	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_82041800_82046200
H1_mix_00029884	chr15	-	570	5	FSM	ENSG00000255769.7	ENST00000612379.4	570	5	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_4	40.9420321918685	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACCACAAGGAGGGGCAT	0	True	NA	NA	False	NA	NA	NA	82513874	82476898	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_82476941_82477032_82477124_82477393_82477583_82477837_82477927_82513715
H1_mix_00029886	chr15	-	2648	18	FSM	ENSG00000103723.17	ENST00000660624.1	2650	18	0	2	0	1	multi-exon	FALSE	canonical	3	27	junction_7	6.75164980478884	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCTGCTGGCTCACCTTT	60	False	NA	-4	True	AATAAA	-12	NA	82680407	82659283	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_82659711_82659844_82659984_82661824_82661923_82662167_82662253_82662693_82662923_82663126_82663234_82663559_82663621_82663800_82663976_82664366_82664491_82664834_82664944_82665456_82665576_82666746_82666934_82676460_82676638_82677273_82677384_82677670_82677804_82678104_82678168_82679728_82679801_82680174
H1_mix_00029889	chr15	-	2425	13	FSM	ENSG00000103723.17	ENST00000664460.1	2425	13	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_10	9.68102382097174	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCCTGTTTTTGTAATAA	-4	True	NA	-36	True	NA	NA	NA	82709843	82675741	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_82676638_82677273_82677384_82677670_82677804_82678104_82678168_82679728_82679801_82680174_82680230_82680471_82680756_82680836_82681020_82681111_82681179_82681419_82681581_82689157_82689233_82689377_82689454_82709593
H1_mix_00029900	chr15	-	896	6	FSM	ENSG00000225151.10	ENST00000557881.1	896	6	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	10.0119928086271	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGGTGAGTAGAGCCCTC	20	False	NA	NA	False	NA	NA	NA	84230136	84204181	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_84204332_84204425_84204517_84204599_84204692_84204786_84204976_84205230_84205320_84229851
H1_mix_00029911	chr15	-	3627	2	FSM	ENSG00000140612.14	ENST00000558924.1	3626	2	0	-1	0	0	multi-exon	FALSE	canonical	3	1205	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTTATCCCTGAATTGT	NA	False	NA	-13	True	AATAAA	-17	NA	84673826	84669544	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_84670070_84670724
H1_mix_00029912	chr15	-	1223	7	FSM	ENSG00000140612.14	ENST00000455959.7	1223	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_6	551.047386548763	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTGCACATTGAACCCC	7	True	NA	-28	True	AATAAA	-2	NA	84716163	84669559	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_84670070_84670724_84670783_84680712_84680833_84687624_84687775_84691534_84691645_84714730_84714867_84716024
H1_mix_00029913	chr15	-	3269	10	FSM	ENSG00000173867.10	ENST00000649547.1	3269	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	131.51407003543	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATAAACGAGTCTATTA	708	False	NA	-38	True	ACTAAA	-6	NA	88546585	88459500	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_88459864_88464702_88464874_88465586_88465774_88511431_88511587_88512350_88513141_88516781_88516974_88527598_88527787_88530622_88531716_88544610_88544695_88546539
H1_mix_00029914	chr15	-	1002	2	FSM	ENSG00000259494.2	ENST00000558531.1	1002	2	0	0	0	0	multi-exon	FALSE	canonical	3	523	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTCGAGGTGTAATTTGG	-1	True	NA	NA	False	NA	NA	NA	88467390	88465012	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_88465774_88467149
H1_mix_00029916	chr15	-	2184	7	NIC	ENSG00000140543.15	novel	2276	5	NA	NA	5	0	intron_retention	FALSE	canonical	1	1	junction_5	24.4909280256089	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGGTTGGATGACTG	18	True	NA	NA	False	AATAAA	-24	NA	88546640	88512479	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_88513141_88516781_88516974_88527598_88527787_88530622_88531474_88531608_88531716_88544610_88544695_88546539
H1_mix_00029919	chr15	-	1189	7	FSM	ENSG00000140545.15	ENST00000542878.5	1172	7	0	-17	0	0	multi-exon	FALSE	canonical	3	13	junction_6	907.32587861253	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGGAGGGTGTTCAGAGG	0	True	NA	NA	False	TTTAAA	-25	NA	88913379	88899297	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_88899533_88899655_88899812_88901550_88901736_88905756_88905902_88906625_88906779_88907194_88907377_88913246
H1_mix_00029923	chr15	-	3163	20	FSM	ENSG00000140521.17	ENST00000637264.1	3153	20	0	-10	0	0	multi-exon	FALSE	canonical	3	7	junction_2	65.561711006795	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCTATCTTCTCATCAAA	5791	False	NA	-17	True	AATAAA	-16	NA	89329037	89316319	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_89316828_89317375_89317477_89318540_89318750_89318930_89319100_89319227_89319351_89320765_89321013_89321124_89321261_89321735_89321854_89321961_89322016_89322741_89322903_89323403_89323512_89323814_89323902_89324106_89324228_89325449_89325687_89326611_89326739_89326911_89327064_89327166_89327350_89328455_89328536_89328684_89328832_89328942
H1_mix_00029929	chr15	-	6582	17	NNC	ENSG00000166813.16	novel	4567	19	NA	NA	2981	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	32.0565296585579	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGTATATAGGGGAAACT	2985	False	NA	-89	True	TTTAAA	-6	NA	89652470	89628050	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_89628787_89628991_89629123_89629374_89629574_89630286_89630494_89631494_89631711_89632819_89632997_89633140_89633267_89633685_89633884_89642202_89642406_89645012_89645166_89645335_89645452_89645892_89646024_89646829_89647058_89647595_89647713_89648254_89648775_89648973_89649368_89649740
H1_mix_00029941	chr15	-	2823	13	NIC	ENSG00000198901.14	novel	3072	15	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_9	102.081122425038	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATAGTGTGGTGTTTCCT	34	True	NA	-3	True	AATAAA	-30	NA	90994499	90966039	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_90967203_90969446_90969624_90970403_90970515_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981747_90981982_90984017_90984141_90984692_90984826_90994406
H1_mix_00029942	chr15	-	2856	13	NIC	ENSG00000198901.14	novel	3072	15	NA	NA	31	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_12	95.7370168163229	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATAGTGTGGTGTTTCCT	79	False	90994586	-3	True	AATAAA	-30	NA	90994571	90966039	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_90967203_90969523_90969624_90970403_90970515_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981498_90981670_90981747_90981982_90984017_90984141_90994406
H1_mix_00029943	chr15	-	2332	13	NIC	ENSG00000198901.14	novel	3072	15	NA	NA	28	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_2	91.8481536740578	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATAGTGTGGTGTTTCCT	76	False	NA	-3	True	AATAAA	-30	NA	90994574	90966039	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_90966654_90969523_90969624_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981498_90981670_90981747_90981982_90984017_90984141_90984692_90984826_90994406
H1_mix_00029955	chr15	-	2427	2	FSM	ENSG00000183060.16	ENST00000545021.2	2431	2	0	4	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTCCCCCTTTTTATTT	-40	False	NA	-11	True	AATAAA	-24	NA	99733444	99727404	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_99729732_99733344
H1_mix_00029956	chr15	-	5981	1	NIC	ENSG00000183060.16	novel	2356	3	NA	NA	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTGATTCCCCCTTTTT	15	True	NA	-15	True	AATAAA	-20	NA	99733389	99727408	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_99727400_99733400
H1_mix_00029959	chr15	-	2877	5	FSM	ENSG00000140471.17	ENST00000561308.5	1612	5	-53	-1212	-40	0	multi-exon	FALSE	canonical	1	15	junction_4	10.917302780449	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCTGATGACTTTTTGAA	NA	False	NA	NA	False	AATAAA	-16	NA	100602224	100572202	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_100574242_100574986_100575129_100580262_100580353_100580443_100580946_100602120
H1_mix_00029965	chr15	-	2440	4	FSM	ENSG00000131876.18	ENST00000560433.5	2440	4	0	0	0	0	multi-exon	FALSE	canonical	3	2560	junction_2	213.274471046115	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGTTGTGTGTCATCAT	6843	False	NA	-14	True	AATAAA	-17	NA	101288448	101281514	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_101281783_101284966_101285061_101285725_101287011_101287655
H1_mix_00029975	chr15	-	2135	2	FSM	ENSG00000184277.13	ENST00000559891.1	2133	2	0	-2	0	0	multi-exon	FALSE	canonical	3	269	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGGCCTGTTTTCTATA	5957	False	NA	65	True	AATAAA	-19	NA	101646422	101641845	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_101642645_101645086
H1_mix_00029981	chr15	+	2094	1	Intergenic	novelGene_460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTCCATCTCCAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	28290124	28292218	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_28290100_28292200
H1_mix_00029982	chr15	+	1021	1	Intergenic	novelGene_469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGTCAATCAGAGAGCCT	NA	False	NA	NA	False	NA	NA	NA	36287910	36288931	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_36287900_36288900
H1_mix_00029983	chr15	+	268	1	Intergenic	novelGene_472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	225	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGTTCTTGTGTGCTGGA	NA	False	NA	NA	False	NA	NA	NA	37239448	37239716	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_37239400_37239700
H1_mix_00029984	chr15	+	204	1	Intergenic	novelGene_478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGACCATTCCTCACCT	NA	False	NA	NA	False	NA	NA	NA	49220060	49220264	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_49220100_49220300
H1_mix_00029985	chr15	+	306	1	Intergenic	novelGene_481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAGTTTATTCATTTGTA	NA	False	NA	NA	False	NA	NA	NA	50879870	50880176	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_50879900_50880200
H1_mix_00029986	chr15	+	1546	1	Intergenic	novelGene_485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCCGTGACTCCCTATT	2368	False	NA	NA	False	NA	NA	NA	57111612	57113158	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_57111600_57113200
H1_mix_00029987	chr15	+	410	1	Intergenic	novelGene_489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATCCCATGCTTTGAGTA	9128	False	NA	NA	False	NA	NA	NA	71163605	71164015	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_71163600_71164000
H1_mix_00029993	chr15	+	6360	38	NNC	ENSG00000276550.5	novel	5746	32	NA	NA	-718	9690	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_37	207.384308177609	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGGTTTGTTACAATAT	NA	False	NA	NA	False	ACTAAA	-28	NA	22494851	22600510	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_22494956_22495569_22495673_22516875_22516991_22523041_22523202_22523346_22523479_22534067_22534244_22537437_22537609_22537992_22538097_22539096_22539248_22541994_22542210_22542482_22542616_22542722_22542851_22542942_22543139_22545766_22545901_22546429_22546601_22546677_22546821_22546937_22547090_22547880_22548073_22554384_22554573_22556011_22556205_22556909_22557093_22559788_22559971_22560787_22560936_22561257_22561455_22561558_22561790_22562948_22563088_22564388_22564533_22566304_22566363_22569148_22569292_22572928_22573182_22573278_22573416_22573974_22574074_22577158_22577333_22577429_22577556_22579583_22579724_22587343_22587392_22589942_22590808_22600478
H1_mix_00029994	chr15	+	4981	25	NNC	ENSG00000276550.5	novel	5181	32	NA	NA	-670	1127	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_17	61.3844895356763	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCGTTATGGCCTCCT	32	False	NA	NA	False	AATAAA	-19	NA	22494899	22565594	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_22494956_22495569_22495673_22516875_22516991_22534067_22534244_22537437_22537609_22537992_22538097_22539096_22539248_22541994_22542210_22542482_22542616_22542722_22542851_22542942_22543139_22545766_22545901_22546429_22546601_22546677_22546821_22546937_22547090_22547880_22548073_22554384_22554547_22556011_22556205_22556909_22557093_22559788_22559971_22560787_22560936_22561257_22561455_22561558_22561790_22562948_22563088_22564388
H1_mix_00029995	chr15	+	704	5	FSM	ENSG00000276550.5	ENST00000615156.1	704	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	109.17302780449	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGGATAAACTGCGGCAGA	NA	False	NA	NA	False	NA	NA	NA	22561433	22564467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_22561455_22561558_22561935_22562642_22562732_22562948_22563088_22564388
H1_mix_00029996	chr15	+	372	1	FSM	ENSG00000277867.1	ENST00000612222.1	287	1	-5	-80	-5	80	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTTGGGGGCACCATC	NA	False	NA	NA	False	NA	NA	NA	22714933	22715305	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_22714900_22715300
H1_mix_00029997	chr15	+	354	3	NNC	ENSG00000275325.4	novel	1064	7	NA	NA	-2952	-14092	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	50	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTGCAATGAAATAGAGAAA	NA	False	NA	NA	False	ATTAAA	-15	NA	22724151	22730607	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_22724236_22727104_22727228_22730460
H1_mix_00029998	chr15	+	379	3	ISM	ENSG00000275325.4	ENST00000622242.4	1064	7	6961	2193	6961	-2193	internal_fragment	FALSE	canonical	3	36	junction_2	115.5	944	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCTAACTTAAGAAAAGAAG	NA	False	NA	NA	False	AATGAA	-16	NA	22734064	22742506	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_22734151_22741059_22741309_22742462
H1_mix_00029999	chr15	+	4170	7	FSM	ENSG00000140157.16	ENST00000398014.7	4169	7	-1	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	364.840452191853	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGGTGACCTCCATCCC	-47	True	NA	NA	False	NA	NA	NA	22838643	22869362	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_22838922_22839654_22839791_22845145_22845268_22851638_22851871_22858539_22858631_22860628_22860790_22866212
H1_mix_00030000	chr15	+	1434	5	FSM	ENSG00000140157.16	ENST00000539711.2	1412	5	-22	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	380.157204324737	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACATTGTCCTCAAAT	-15	True	NA	54	True	NA	NA	NA	22838675	22866916	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_22838922_22851638_22851871_22858539_22858631_22860628_22860790_22866212
H1_mix_00030002	chr15	+	1776	12	FSM	ENSG00000128739.23	ENST00000554227.6	1763	12	-13	0	0	0	multi-exon	FALSE	canonical	3	44	junction_6	3417.84548877271	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAATAATAGCTAATAATAA	NA	False	NA	-22	True	NA	NA	NA	24954934	24978539	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_24955063_24962113_24962210_24967028_24967153_24967931_24968083_24974310_24974457_24974641_24974958_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
H1_mix_00030003	chr15	+	6433	5	NNC	ENSG00000224078.15	novel	17832	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	369.949574266548	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGAGTTTTGTGGTTTT	-2	True	NA	38	True	AATATA	-20	NA	24981993	25002404	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_24982438_24993783_24998487_24998969_24999079_25000244_25000375_25001357
H1_mix_00030004	chr15	+	9493	51	Fusion	ENSG00000214265.11_ENSG00000224078.15	novel	9815	40	NA	NA	0	0	multi-exon	FALSE	canonical	3	18	junction_10	518.075115789207	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTATCAGTTGAATTACT	-2	True	NA	10	True	AATAAA	-2	NA	24981993	25119875	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr15_+_24982438_24993783_24993852_24998119_24998487_24998969_24999079_25000244_25000375_25001357_25001714_25002724_25002889_25019026_25019149_25019827_25019870_25020589_25020762_25037711_25037901_25039710_25040718_25040802_25040848_25051101_25051237_25053827_25053968_25056482_25056623_25059154_25059295_25059456_25059719_25061949_25062089_25064714_25064856_25067411_25067532_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00030005	chr15	+	20135	8	ISM	ENSG00000224078.15	ENST00000551631.7	17832	11	18761	-3142	-1987	-2796	3prime_fragment	FALSE	canonical	3	109	junction_4	316.728687088003	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACCCAAAAAAAAAAAAAAAA	2149	False	NA	NA	False	NA	NA	NA	24998317	25039632	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_24998487_24998969_24999079_25000244_25000375_25001357_25001714_25002724_25002889_25019026_25019149_25019827_25019870_25020589
H1_mix_00030007	chr15	+	15409	38	Fusion	ENSG00000274640.1_ENSG00000224078.15	novel	9815	40	NA	NA	0	0	intron_retention	FALSE	canonical	3	114	junction_7	473.031556217449	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTATCAGTTGAATTACT	5927	False	NA	10	True	AATAAA	-2	NA	25041973	25119875	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr15_+_25051237_25053827_25053968_25056482_25056623_25059154_25059295_25059456_25059719_25061949_25062089_25064714_25064856_25067408_25067532_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00030008	chr15	+	6903	39	NNC	ENSG00000224078.15	novel	6757	42	NA	NA	0	0	intron_retention	FALSE	canonical	3	19	junction_1	491.94628800003	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTATCAGTTGAATTACT	5927	False	NA	10	True	AATAAA	-2	NA	25041973	25119875	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_25042516_25051101_25051237_25053827_25053968_25056482_25056623_25059154_25059295_25059456_25059719_25061949_25062089_25064714_25064856_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25096827_25097031_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00030009	chr15	+	7361	37	NIC	ENSG00000224078.15	novel	11322	42	NA	NA	0	0	intron_retention	FALSE	canonical	3	53	junction_3	500.33010322322	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAATTCTTTTGTGTTTT	5927	False	NA	26	True	CATAAA	-20	NA	25041973	25120426	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_25042911_25051101_25051237_25053827_25053968_25059154_25059295_25059456_25059719_25061305_25061414_25061949_25062089_25064714_25064856_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00030010	chr15	+	7731	42	NIC	ENSG00000224078.15	novel	11322	42	NA	NA	0	0	intron_retention	FALSE	canonical	3	21	junction_1	533.318064797306	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAATTCTTTTGTGTTTT	5927	False	NA	26	True	CATAAA	-20	NA	25041973	25120426	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_25042516_25042797_25042911_25051101_25051237_25053827_25053968_25056482_25056623_25059154_25059295_25059456_25059719_25061305_25061414_25061949_25062089_25064714_25064856_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25079825_25080080_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25086509_25086615_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095729_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00030011	chr15	+	7084	40	NIC	ENSG00000224078.15	novel	6757	42	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_1	489.925705164769	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAATTCTTTTGTGTTTT	5927	False	NA	26	True	CATAAA	-20	NA	25041973	25120426	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_25042201_25042475_25042516_25051101_25051237_25053827_25053968_25056482_25056623_25059154_25059295_25059456_25059719_25061305_25061414_25061949_25062089_25064714_25064856_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00030012	chr15	+	6366	36	NIC	ENSG00000224078.15	novel	9815	40	NA	NA	137	0	combination_of_known_splicesites	FALSE	canonical	3	53	junction_2	465.46151422485	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGGGATTAAGTATGTG	1960	False	NA	25	True	AATAAA	-17	NA	25050768	25119890	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_25051237_25053827_25053968_25059154_25059295_25059456_25059719_25061949_25062089_25064714_25064856_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00030013	chr15	+	659	1	FSM	ENSG00000207063.1	ENST00000384335.1	95	1	5	-569	5	569	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGAAGGTACTCCAGGGG	2673	False	NA	NA	False	NA	NA	NA	25051481	25052140	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25051500_25052100
H1_mix_00030014	chr15	+	7252	41	NIC	ENSG00000224078.15	novel	11322	42	NA	NA	43	0	combination_of_known_splicesites	TRUE	canonical	3	15	junction_1	530.309239972301	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGGGATTAAGTATGTG	5440	False	NA	25	True	AATAAA	-17	NA	25054248	25119890	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_25054867_25054969_25055231_25056482_25056623_25059154_25059295_25059456_25059719_25061305_25061414_25061949_25062089_25064714_25064856_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25101822_25101932_25103858_25103971_25105699_25105825_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25110385_25110537_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00030015	chr15	+	5613	34	NIC	ENSG00000224078.15	novel	9815	40	NA	NA	-130	0	combination_of_known_splicesites	FALSE	canonical	3	65	junction_3	477.944416238723	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTACTGGGATTAAGTAT	NA	False	NA	22	True	AATAAA	-14	NA	25059537	25119887	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_25059719_25061305_25061414_25061949_25062089_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00030016	chr15	+	5768	35	NIC	ENSG00000224078.15	novel	9815	40	NA	NA	-130	0	combination_of_known_junctions	FALSE	canonical	3	114	junction_4	467.905996570142	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGGGATTAAGTATGTG	NA	False	NA	25	True	AATAAA	-17	NA	25059537	25119890	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_25059719_25061305_25061414_25061949_25062089_25064714_25064856_25067408_25067532_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00030017	chr15	+	6060	34	Fusion	ENSG00000275529.1_ENSG00000224078.15	novel	8250	35	NA	NA	0	0	multi-exon	FALSE	canonical	3	121	junction_13	503.307233008724	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAATTCTTTTGTGTTTT	NA	False	NA	26	True	CATAAA	-20	NA	25059537	25120426	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr15_+_25059719_25061305_25061414_25061949_25062089_25064714_25064856_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095729_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00030018	chr15	+	6308	35	NIC	ENSG00000224078.15	novel	9815	40	NA	NA	-130	0	combination_of_known_junctions	FALSE	canonical	3	99	junction_13	530.352719348563	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAATTCTTTTGTGTTTT	NA	False	NA	26	True	CATAAA	-20	NA	25059537	25120426	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_25059719_25061305_25061414_25061949_25062089_25064714_25064856_25067408_25067532_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25081090_25081225_25082588_25082706_25083366_25083528_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109100_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00030019	chr15	+	6287	35	NIC	ENSG00000224078.15	novel	7504	40	NA	NA	-130	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_22	500.306495161062	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAATTCTTTTGTGTTTT	NA	False	NA	26	True	CATAAA	-20	NA	25059537	25120426	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_25059719_25061305_25061414_25061949_25062089_25064714_25064856_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25101822_25101932_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118270_25118383_25119064
H1_mix_00030020	chr15	+	5957	33	NIC	ENSG00000224078.15	novel	9815	40	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_1	496.506536926693	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAATTCTTTTGTGTTTT	NA	False	NA	26	True	CATAAA	-20	NA	25064771	25120426	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_25064856_25067411_25067532_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25081090_25081225_25082588_25082706_25083366_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00030021	chr15	+	4930	31	NNC	ENSG00000224078.15	novel	8250	35	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_25	499.816265130387	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTACTGGGATTAAGTAT	NA	False	NA	22	True	AATAAA	-14	NA	25064840	25119887	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_25064856_25070119_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25110492_25110537_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00030022	chr15	+	7709	30	NIC	ENSG00000224078.15	novel	8250	35	NA	NA	-2343	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_11	517.832437008415	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAATTCTTTTGTGTTTT	NA	False	NA	26	True	CATAAA	-20	NA	25067803	25120426	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_25070260_25072724_25072864_25073891_25074052_25075734_25075867_25076856_25076991_25078861_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25086330_25086465_25087466_25087600_25091589_25091720_25093833_25093975_25095626_25095729_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00030023	chr15	+	5149	28	NIC	ENSG00000224078.15	novel	8415	34	NA	NA	71	-11	combination_of_known_junctions	FALSE	canonical	3	330	junction_16	431.416409017809	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCATAAAACCCTTCACC	NA	False	NA	-3	True	NA	NA	NA	25075841	25120397	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_25075867_25076856_25076991_25078861_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00030024	chr15	+	5066	27	NIC	ENSG00000224078.15	novel	8307	33	NA	NA	56	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_7	472.968693060529	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAATTCTTTTGTGTTTT	NA	False	NA	26	True	CATAAA	-20	NA	25076965	25120426	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_25076991_25078861_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25086330_25086465_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00030025	chr15	+	4270	26	NIC	ENSG00000224078.15	novel	8415	34	NA	NA	13	-1	combination_of_known_junctions	FALSE	canonical	3	56	junction_9	479.837695893101	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTTATCAGTTGAATTAC	NA	False	NA	9	True	AATAAA	-1	NA	25078966	25119874	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_25078996_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095718_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00030026	chr15	+	5465	27	ISM	ENSG00000224078.15	ENST00000662834.1	11322	42	37084	2592	0	0	3prime_fragment	FALSE	canonical	3	97	junction_14	506.259656931783	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTATCAGTTGAATTACT	-1	True	NA	10	True	AATAAA	-2	NA	25079057	25119875	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_25080080_25081090_25081225_25082588_25082706_25083395_25083528_25085189_25085323_25087466_25087600_25089613_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25101822_25101932_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00030027	chr15	+	1301	1	FSM	ENSG00000207174.1	ENST00000384445.1	92	1	1	-1210	1	1210	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGTGGGCATGGAAGGA	2229	False	NA	NA	False	NA	NA	NA	25081287	25082588	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25081300_25082600
H1_mix_00030028	chr15	+	4396	21	Fusion	ENSG00000261069.3_ENSG00000224078.15	novel	6659	20	NA	NA	0	0	multi-exon	TRUE	canonical	0	0	junction_1	525.457324623037	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTATCAGTTGAATTACT	8602	False	NA	10	True	AATAAA	-2	NA	25087660	25119875	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr15_+_25087962_25089103_25089867_25091589_25091720_25093833_25093975_25095626_25095729_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00030029	chr15	+	4777	21	NIC	ENSG00000224078.15	novel	7914	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	97	junction_8	533.618824630466	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTCACCTATGTTAAATT	NA	False	NA	8	True	CATAAA	-2	NA	25089063	25120408	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_25089867_25091589_25091720_25093833_25093975_25095626_25095729_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25101822_25101932_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00030030	chr15	+	6659	20	FSM	ENSG00000224078.15	ENST00000661926.1	6659	20	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_4	463.182929945392	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGTAACACATTCATAT	NA	False	NA	-1	True	AATAAA	-9	NA	25089131	25122467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25089867_25091589_25091720_25093833_25093975_25095626_25095729_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00030032	chr15	+	4163	20	NNC	ENSG00000224078.15	novel	11322	42	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_7	563.23215447433	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAATTCTTTTGTGTTTT	1178	False	NA	26	True	CATAAA	-20	NA	25091609	25120426	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_25091720_25093833_25093975_25095626_25095829_25096827_25097031_25097320_25097440_25098716_25098829_25099144_25099279_25101822_25101932_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00030033	chr15	+	3905	19	NIC	ENSG00000224078.15	novel	4259	22	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	101	junction_7	514.976066206413	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTTCACCTATGTTAAAT	1227	False	NA	7	True	CATAAA	-1	NA	25091658	25120407	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25105699_25105825_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118270_25118383_25119064
H1_mix_00030034	chr15	+	3710	18	ISM	ENSG00000224078.15	ENST00000663026.1	7146	20	5132	2041	0	0	3prime_fragment	FALSE	canonical	3	56	junction_2	417.66917091423	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAATTCTTTTGTGTTTT	1227	False	NA	26	True	CATAAA	-20	NA	25091658	25120426	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_25091720_25093833_25093975_25095718_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00030035	chr15	+	7339	17	FSM	ENSG00000224078.15	ENST00000663612.1	7339	17	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_10	507.969610311483	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGTAACACATTCATAT	3605	False	NA	-1	True	AATAAA	-9	NA	25094036	25122467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25100778_25100891_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109100_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
H1_mix_00030036	chr15	+	3706	17	NNC	ENSG00000224078.15	novel	6540	16	NA	NA	487	0	at_least_one_novel_splicesite	FALSE	canonical	3	149	junction_5	572.67153202665	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAATTCTTTTGTGTTTT	468	False	NA	26	True	CATAAA	-20	NA	25096825	25120426	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_25097031_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25105718_25105825_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118270_25118383_25119064
H1_mix_00030038	chr15	+	2592	9	NIC	ENSG00000186297.12	novel	2553	11	NA	NA	-121	-7	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	54.6345815395341	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGACATATAGGATTC	73	False	NA	9	True	AATAAA	-13	NA	26866789	26949200	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_26867112_26880845_26880968_26883165_26883234_26883336_26883558_26914802_26914886_26937184_26937329_26939924_26940078_26943214_26943427_26947933
H1_mix_00030040	chr15	+	3876	1	FSM	ENSG00000261524.1	ENST00000561950.1	2166	1	69	-1779	69	1779	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTGTTGAAATTGTAA	NA	False	NA	NA	False	AATAAA	-20	NA	28402936	28406812	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_28402900_28406800
H1_mix_00030041	chr15	+	5750	32	NIC	ENSG00000206149.11	novel	5187	33	NA	NA	4	-4	combination_of_known_splicesites	FALSE	canonical	3	15	junction_18	237.279841547896	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATAATTACACCCATTAT	14	True	NA	NA	False	AATAAA	-18	NA	28589495	28685260	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_28589549_28590157_28590261_28612058_28612174_28632636_28632808_28633191_28633296_28633589_28633741_28636486_28636702_28636974_28637108_28637214_28637343_28637434_28637631_28640258_28640393_28640921_28641093_28641169_28641227_28641429_28641582_28642372_28642565_28648879_28649068_28650506_28650700_28651404_28651588_28654273_28654456_28655272_28655421_28655795_28656027_28657186_28657326_28658622_28658767_28663377_28663521_28667195_28667464_28667560_28667698_28668256_28668356_28671459_28671634_28671730_28671857_28673887_28674028_28681795_28681844_28684128
H1_mix_00030042	chr15	+	279	1	FSM	ENSG00000256951.1	ENST00000431496.1	288	1	-5	14	-5	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTACTTGGAGTAGGGTCTC	NA	False	NA	NA	False	NA	NA	NA	28789193	28789472	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_28789200_28789500
H1_mix_00030043	chr15	+	994	1	FSM	ENSG00000259523.1	ENST00000557989.1	1451	1	474	-17	474	17	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAT	1526	False	NA	NA	False	NA	NA	NA	29823104	29824098	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_29823100_29824100
H1_mix_00030044	chr15	+	1588	1	FSM	ENSG00000269930.1	ENST00000602594.1	792	1	-798	2	-798	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAAGTGTTGTTTTTGCCT	NA	False	NA	-4	True	AATAAA	-14	NA	30616159	30617747	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_30616200_30617700
H1_mix_00030045	chr15	+	435	2	NNC	ENSG00000259845.1	novel	2393	16	NA	NA	-173	-27538	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	33	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCGTGCATGTGGCTGTC	NA	False	NA	NA	False	NA	NA	NA	30815097	30816615	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_30815447_30816529
H1_mix_00030046	chr15	+	4454	15	FSM	ENSG00000198690.10	ENST00000657391.1	4442	15	-12	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	47.490546857415	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAAACCCGCATTAGCAG	-9	True	NA	NA	False	AAAAAG	-12	NA	30903851	30942767	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_30903895_30904511_30905898_30908117_30908259_30910613_30910816_30913857_30914092_30918163_30918296_30920544_30920654_30922234_30922355_30925126_30925292_30925788_30925940_30928552_30928657_30929202_30929398_30930542_30930672_30937118_30937260_30941565
H1_mix_00030048	chr15	+	366	2	FSM	ENSG00000261064.1	ENST00000561999.1	366	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCGCAGTAGCTGGGAT	NA	False	NA	NA	False	NA	NA	NA	32536713	32575643	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_32537007_32575570
H1_mix_00030050	chr15	+	596	3	NNC	ENSG00000166922.9	novel	1148	5	NA	NA	24	-24643	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	32.5	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTATTTCTTTTTACTTTT	20	True	NA	NA	False	ATTAAA	-14	NA	32641733	32667120	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_32641779_32643585_32643819_32666802
H1_mix_00030051	chr15	+	492	1	FSM	ENSG00000259397.3	ENST00000594613.1	730	1	403	-165	403	165	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATTCTCCATAAATAGGT	432	False	NA	NA	False	NA	NA	NA	35092883	35093375	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_35092900_35093400
H1_mix_00030052	chr15	+	895	1	FSM	ENSG00000259516.2	ENST00000559548.2	737	1	-90	-68	-90	-67	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAATCCTGCCCCCTGAA	21	False	NA	NA	False	NA	NA	NA	35237235	35238130	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_35237200_35238100
H1_mix_00030053	chr15	+	354	2	Intergenic	novelGene_470	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	41	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGGGGTTCTTGCCCCGT	NA	False	NA	NA	False	NA	NA	NA	36289986	36290511	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_36290236_36290406
H1_mix_00030054	chr15	+	489	1	FSM	ENSG00000259326.1	ENST00000560231.1	2129	1	-73	1713	-73	-1713	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATCCACCATCCTCTGGA	9577	False	NA	NA	False	NA	NA	NA	38502779	38503268	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_38502800_38503300
H1_mix_00030055	chr15	+	1291	4	FSM	ENSG00000137801.11	ENST00000484734.1	1291	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	7.58653778449403	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATGCAGTTTTCAAAAA	-14	True	NA	NA	False	NA	NA	NA	39593044	39595529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_39593228_39593396_39594197_39594300_39594441_39595361
H1_mix_00030057	chr15	+	665	4	FSM	ENSG00000248508.9	ENST00000560341.2	669	4	0	4	0	-4	multi-exon	FALSE	canonical	1	1	junction_3	18.4571575998762	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAAGTTTTCCTCCTAA	44	True	NA	NA	False	TATAAA	-19	NA	40039348	40056996	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40039449_40045960_40046070_40056452_40056642_40056729
H1_mix_00030058	chr15	+	869	1	FSM	ENSG00000279409.1	ENST00000623564.1	1870	1	413	588	413	-588	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCTCAAAAAAAAAAAAAAAA	5628	False	NA	NA	False	NA	NA	NA	40258913	40259782	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40258900_40259800
H1_mix_00030059	chr15	+	12549	8	FSM	ENSG00000140323.6	ENST00000267889.5	12612	8	25	38	25	-38	multi-exon	FALSE	canonical	0	0	junction_6	1.48461497791618	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTGTAACTTCCTGTCA	24	False	NA	NA	False	NA	NA	NA	40358243	40378583	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40358441_40363624_40363955_40364225_40364256_40364420_40364545_40364837_40364954_40365146_40365275_40365627_40365726_40367057
H1_mix_00030061	chr15	+	1175	2	Intergenic	novelGene_474	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGGCTTAAAGTGCACTAA	NA	False	NA	53	True	NA	NA	NA	40394538	40396949	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_40394599_40395834
H1_mix_00030062	chr15	+	9561	27	FSM	ENSG00000137812.21	ENST00000346991.9	9573	27	12	0	-2	0	multi-exon	FALSE	canonical	1	1	junction_6	5.91407907970013	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGTGAGTAGTGTTTC	12	True	NA	9	True	ATTAAA	-20	NA	40594031	40664342	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40594393_40602914_40602967_40605109_40605150_40606392_40606453_40608846_40608909_40610244_40610298_40610798_40610877_40611477_40611512_40615340_40615379_40618958_40619012_40620639_40625641_40628069_40628209_40628610_40628679_40629272_40629372_40640911_40641028_40644996_40645088_40645655_40645773_40646986_40647075_40650300_40650379_40650543_40650584_40651470_40651573_40652004_40652106_40654908_40654978_40657041_40657152_40657354_40657474_40659338_40659462_40662073
H1_mix_00030065	chr15	+	2842	11	NIC	ENSG00000166145.15	novel	1417	9	NA	NA	77	-22	combination_of_known_junctions	FALSE	canonical	3	181	junction_1	194.826178939074	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATCATACTTTGAGCT	5	False	NA	NA	False	NA	NA	NA	40844253	40858185	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_40844279_40844489_40845030_40853123_40853252_40853488_40853628_40853710_40853882_40854059_40854087_40854396_40854523_40854638_40854690_40855891_40856063_40856275_40856324_40856769
H1_mix_00030068	chr15	+	940	2	FSM	ENSG00000128917.8	ENST00000557876.1	1439	2	24	475	24	-475	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCGTCTCTCAACCCTC	24	False	NA	NA	False	NA	NA	NA	40929363	40930415	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_40929735_40929846
H1_mix_00030074	chr15	+	6597	26	NIC	ENSG00000168970.22	novel	3331	25	NA	NA	2	-3	intron_retention	FALSE	canonical	3	34	junction_16	38.9813493865977	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGAGGCGCTGAGACC	-13	True	NA	17	True	NA	NA	NA	41828096	41848140	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_41828189_41834739_41834894_41834969_41835224_41835587_41835645_41836147_41836244_41836474_41836552_41836780_41836941_41837067_41840231_41840523_41840661_41840773_41840906_41841054_41841096_41841230_41841274_41841516_41841572_41841818_41841950_41842192_41842277_41842553_41842592_41843675_41843812_41844470_41844608_41844847_41845071_41845202_41845321_41845637_41845776_41845942_41846048_41846202_41846383_41846668_41846836_41847336_41847524_41847648
H1_mix_00030075	chr15	+	3035	12	FSM	ENSG00000243708.11	ENST00000483748.5	3035	12	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	15.7758053061595	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGAGGCGCTGAGACC	2952	False	NA	17	True	NA	NA	NA	41841828	41848140	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_41841950_41842192_41843224_41843675_41843812_41844470_41844608_41844847_41845071_41845202_41845321_41845637_41845776_41845942_41846048_41846202_41846383_41846668_41846836_41847336_41847524_41847648
H1_mix_00030104	chr15	+	1441	4	FSM	ENSG00000128951.14	ENST00000559540.5	1441	4	0	0	0	0	multi-exon	FALSE	canonical	3	1883	junction_3	188.011228979075	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGCCTGTATTTA	19	True	NA	18	True	NA	NA	NA	48332209	48342395	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_48332407_48334416_48334509_48336045_48336091_48341288
H1_mix_00030109	chr15	+	1252	3	NNC	ENSG00000244879.9	novel	1098	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	18	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGACTCCACTTATGCA	-10	True	NA	16	True	ATTAAA	-19	NA	50355467	50371343	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_50355546_50356099_50356262_50370331
H1_mix_00030112	chr15	+	5408	19	NIC	ENSG00000138592.14	novel	18865	20	NA	NA	7	1385	combination_of_known_junctions	FALSE	canonical	3	98	junction_11	59.7570441118673	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTGATTAATGTTTATC	30	False	NA	12	True	AATAAA	-19	NA	50424433	50501080	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_50424515_50439008_50439178_50441348_50441494_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480_50482066_50489800_50489882_50490262_50490526_50492700_50492914_50494069_50494281_50495847_50496085_50497088_50497232_50498595_50498729_50498902
H1_mix_00030123	chr15	+	4647	20	NIC	ENSG00000140262.18	novel	6061	20	NA	NA	12	-2	combination_of_known_junctions	FALSE	canonical	3	64	junction_17	61.5927559866231	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAACACAGTAAAATAGTGA	10	True	NA	8	True	AATAAA	-16	NA	56918686	57288504	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_56918907_56919891_56919989_56921025_56921099_57063749_57063824_57091788_57091892_57166401_57166467_57192157_57192294_57197772_57197826_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57253261_57253469_57262093_57262209_57263111_57263275_57273032_57273263_57282444_57282599_57286156
H1_mix_00030124	chr15	+	4648	20	NNC	ENSG00000140262.18	novel	6061	20	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_14	69.409579675233	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACACAGTAAAATAGTGAG	10	True	NA	9	True	AATAAA	-17	NA	56918686	57288505	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_56918907_56919891_56919989_56921025_56921099_57063749_57063824_57091788_57091892_57166401_57166467_57192157_57192294_57197772_57197826_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57253264_57253469_57262093_57262209_57263111_57263275_57273029_57273263_57282444_57282599_57286156
H1_mix_00030131	chr15	+	4731	14	NNC	ENSG00000157450.16	novel	4803	14	NA	NA	37	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	40.1506040542002	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTCTTTGTGTTTCAT	29	False	NA	10	True	AATAAA	-13	NA	58988174	59096423	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_58988406_59030803_59031703_59052304_59052432_59055681_59055846_59058355_59058551_59066763_59067084_59075956_59076216_59080935_59081285_59084128_59084255_59085658_59085786_59089666_59089760_59091058_59091155_59092536_59092641_59094782
H1_mix_00030139	chr15	+	1681	9	FSM	ENSG00000140416.23	ENST00000267996.11	1670	9	-11	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	842.382697694462	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGGTCCTGTCATTTG	-2	True	NA	37	True	AATAAA	-27	NA	63042746	63071915	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_63042944_63043705_63043832_63056984_63057119_63059562_63059681_63060868_63060940_63061712_63061789_63062214_63062278_63062575_63062646_63071089
H1_mix_00030163	chr15	+	518	4	FSM	ENSG00000103855.18	ENST00000559978.1	503	4	-15	0	-15	0	multi-exon	FALSE	canonical	1	7	junction_3	401.172725338545	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCCACCCATAATTCTTAC	1202	False	NA	NA	False	NA	NA	NA	73709549	73714053	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_73709690_73711134_73711171_73712933_73713064_73713841
H1_mix_00030165	chr15	+	5227	8	FSM	ENSG00000140464.20	ENST00000565898.5	5393	8	-13	179	0	-179	multi-exon	FALSE	canonical	3	9	junction_7	50.0155077991633	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGGCAAATGGGAGAATG	-20	True	NA	NA	False	NA	NA	NA	73994715	74047633	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74033155_74033415_74034477_74034531_74042988_74043140_74044220
H1_mix_00030166	chr15	+	3943	5	NNC	ENSG00000140464.20	novel	1404	5	NA	NA	0	-237	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_4	55.7645720865856	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAATTATAAATCAGTCA	8	True	NA	13	True	AATAAA	-19	NA	73994743	74028205	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74025585
H1_mix_00030167	chr15	+	4502	5	FSM	ENSG00000140464.20	ENST00000563500.5	4502	5	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_4	35.0178525897863	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTGCGAACCCTTATTC	13	False	NA	17	True	AATAAA	-17	NA	73994802	74036393	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74033155
H1_mix_00030172	chr15	+	2307	11	NIC	ENSG00000179335.20	novel	1854	13	NA	NA	1	-19	intron_retention	FALSE	canonical	3	52	junction_3	57.0316578752538	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTTCTTACTGTTTGTA	13	True	NA	0	True	TATAAA	-11	NA	74615855	74630097	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_74615899_74619196_74619349_74620008_74620226_74622493_74622561_74624901_74625019_74625801_74625969_74627351_74627447_74627538_74627669_74627969_74628053_74628603_74628684_74628941
H1_mix_00030174	chr15	+	1768	13	NIC	ENSG00000179335.20	novel	1854	13	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	62.7393195868605	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGGTACCAGTGTGTCC	38	False	NA	21	True	AATAAA	-21	NA	74615880	74630118	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_74615899_74619196_74619349_74619966_74620226_74622119_74622217_74622493_74622561_74624901_74625019_74625801_74625969_74627351_74627447_74627538_74627669_74627969_74628053_74628603_74628684_74628941_74629033_74629706
H1_mix_00030177	chr15	+	5513	6	ISM	ENSG00000178802.18	ENST00000566377.5	2809	7	511	-2778	0	0	3prime_fragment	FALSE	canonical	3	41	junction_5	45.2725082141469	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGCCTCCATTCAACA	501	False	NA	NA	False	AATAAA	-14	NA	74890549	74902219	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_74890655_74891378_74891580_74892660_74892803_74893137_74893321_74896151_74896326_74897511
H1_mix_00030194	chr15	+	7431	7	Fusion	ENSG00000259429.5_ENSG00000197978.10	novel	6549	6	NA	NA	2621	-1	intron_retention	FALSE	canonical	3	39	junction_5	9.13631338244383	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTGTGTCTTGAAAAC	NA	False	NA	29	True	ATTAAA	-29	NA	82417407	82439152	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr15_+_82420076_82431829_82432898_82433561_82433650_82434033_82434603_82434868_82434930_82435966_82436070_82436278
H1_mix_00030210	chr15	+	3448	4	NIC	ENSG00000181026.15	novel	3072	4	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	69	junction_1	276.674297083532	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAAGTGGCCCTTCCTGT	-8	True	NA	28	True	AATAAA	-18	NA	88621378	88632281	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_88621798_88626145_88626750_88629225_88629427_88630057
H1_mix_00030212	chr15	+	2596	4	NNC	ENSG00000181026.15	novel	3072	4	NA	NA	0	34144	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	309.031821446703	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACAACCTACAACAGACAC	482	False	NA	NA	False	NA	NA	NA	88626611	88666425	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_+_88626750_88629225_88629427_88630057_88632280_88666390
H1_mix_00030214	chr15	+	1050	3	ISM	ENSG00000172183.16	ENST00000560741.5	800	4	2800	0	0	0	3prime_fragment	FALSE	canonical	3	37	junction_1	6.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTGGCTCTATATTTTC	-7	True	NA	2	True	AATACA	-11	NA	88638952	88655621	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_+_88639595_88652109_88652311_88655414
H1_mix_00030215	chr15	+	3725	36	NIC	ENSG00000140525.19	novel	4503	39	NA	NA	6	20	combination_of_known_splicesites	FALSE	canonical	3	32	junction_22	126.662476121158	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTACCCAACAAGCAAC	29	True	NA	46	True	AATAAA	-42	NA	89244022	89316501	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_89244045_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521_89264608_89268398_89268526_89273376_89273470_89274167_89274305_89276710_89276892_89278686_89278775_89281169_89281301_89281764_89281836_89283135_89283251_89285095_89285219_89290212_89290282_89291612_89291715_89292687_89292865_89292941_89293064_89299799_89299967_89300299_89300386_89301325_89301443_89303863_89303916_89305114_89305243_89305340_89305410_89305604_89305699_89306006_89306195_89307475_89307530_89307612_89307673_89312903_89312973_89314611_89314708_89315281_89315390_89316396
H1_mix_00030218	chr15	+	2367	4	FSM	ENSG00000140534.14	ENST00000561095.1	2367	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	43.0219582177391	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCATTGTTGTATGAGCT	847	False	NA	13	True	AGTAAA	-26	NA	89625399	89631056	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_89625787_89625935_89626062_89626955_89627183_89629429
H1_mix_00030230	chr15	+	5433	25	NIC	ENSG00000196547.15	novel	5124	23	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	20.6209171042954	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTAAGAATCAACTGAAGAC	5	True	NA	17	True	AATAAA	-18	NA	90902694	90921191	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_90902976_90903230_90903433_90904189_90904340_90905250_90905509_90905578_90905724_90905844_90906017_90906369_90906498_90906739_90906914_90907308_90907496_90909326_90909505_90910089_90910293_90910500_90910684_90910846_90910962_90911170_90911239_90911384_90911551_90912042_90912280_90912541_90912665_90912876_90912992_90913272_90913407_90913613_90913756_90916122_90916257_90916585_90916661_90918193_90918389_90918644_90918756_90919634
H1_mix_00030246	chr15	+	1347	9	NIC	ENSG00000168904.15	novel	5852	10	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	27.4451156856735	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATTTGTCTTCTGTGTTT	-6	True	NA	24	True	AATATA	-20	NA	99251511	99386296	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_+_99251542_99255897_99256126_99287256_99287295_99287813_99287952_99333922_99334130_99352368_99352472_99361335_99361512_99363105_99363266_99386029
H1_mix_00030251	chr15	+	5413	12	FSM	ENSG00000068305.18	ENST00000557942.6	5580	12	103	64	60	18	multi-exon	FALSE	canonical	3	7	junction_9	54.9071342216087	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTGTTGTAAACTGTTTG	15	False	NA	39	True	AATAAA	-43	NA	99566086	99716424	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_+_99566105_99598429_99598512_99632977_99633174_99645560_99645765_99671322_99671455_99674392_99674613_99675398_99675459_99690240_99690429_99703361_99703386_99706728_99706856_99710633_99710761_99712389
H1_mix_00030257	chr15	-	380	1	FSM	ENSG00000281087.1	ENST00000625294.1	622	1	305	-63	305	63	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGAAACAGAGGCATCACA	NA	False	NA	NA	False	AATAAA	-30	NA	21709965	21709585	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_21709600_21710000
H1_mix_00030258	chr15	-	622	1	FSM	ENSG00000223877.4	ENST00000460876.2	622	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATAAATCCTTGTTTTGT	8010	False	NA	NA	False	NA	NA	NA	22152897	22152275	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_22152300_22152900
H1_mix_00030259	chr15	-	488	4	FSM	ENSG00000273749.5	ENST00000621105.1	514	4	26	0	26	0	multi-exon	FALSE	canonical	3	323	junction_2	54.4691553898983	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTAATTTCACTTTGCC	5101	False	NA	NA	False	NA	NA	NA	22912360	22909193	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_22909314_22910519_22910629_22910736_22910814_22912178
H1_mix_00030260	chr15	-	3755	23	NNC	ENSG00000275835.5	novel	3342	22	NA	NA	5	7500	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	24.6620547024931	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTCCTTTTGATTATT	8	True	NA	0	True	AATAAA	-15	NA	23039564	22991676	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_22992383_23000568_23000670_23003064_23003154_23004101_23004228_23005431_23005611_23006051_23006173_23006267_23006353_23008698_23008882_23009944_23010134_23011132_23011332_23017772_23018042_23019218_23019335_23021958_23022162_23023946_23024194_23024736_23024831_23026115_23026206_23027191_23027307_23030884_23031021_23031949_23032030_23032727_23032825_23036896_23037006_23037098_23037153_23039397
H1_mix_00030261	chr15	-	1692	3	ISM	ENSG00000259414.1	ENST00000559033.1	726	4	2503	-1283	2503	1283	3prime_fragment	FALSE	canonical	1	1	junction_2	10.5	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCAACTGATGCTCCTGGT	NA	False	NA	NA	False	AATAAA	-12	NA	23291164	23288019	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_23289476_23290836_23290962_23291053
H1_mix_00030262	chr15	-	1940	2	Genic_Genomic	ENSG00000182636.8	novel	1906	1	NA	NA	0	79546	multi-exon	FALSE	non_canonical	0	0	junction_1	0	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAACCTGGCTCTGAGGAT	-4	True	NA	NA	False	NA	NA	NA	23687305	23605853	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr15_-_23605879_23685390
H1_mix_00030263	chr15	-	8939	15	FSM	ENSG00000114062.22	ENST00000438097.6	8939	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	192.31936926872	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTGCTAGTATTTTG	6	True	NA	1	True	CATAAA	-21	NA	25439008	25333727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_25339258_25340084_25340229_25354352_25354427_25354527_25354684_25355891_25356057_25356690_25356897_25360382_25360528_25370565_25371813_25375464_25375764_25405460_25405503_25407066_25407229_25408619_25408685_25409087_25409208_25411907_25411972_25438488
H1_mix_00030264	chr15	-	5086	12	NIC	ENSG00000114062.22	novel	5274	14	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_11	157.498524196155	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTCTTCAGTTCTCA	49	True	NA	-19	True	AATAAA	-13	NA	25438965	25337246	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_25339258_25340084_25340229_25354352_25354427_25354527_25354684_25355891_25356057_25356690_25356897_25360382_25360528_25370565_25371813_25375464_25375764_25405460_25405503_25409087_25409208_25438488
H1_mix_00030265	chr15	-	654	3	FSM	ENSG00000114062.22	ENST00000625681.2	654	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	80	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTGAAGCTAGCCGAATG	15	True	NA	NA	False	NA	NA	NA	25438999	25405479	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_25405503_25409087_25409208_25438488
H1_mix_00030266	chr15	-	1759	8	FSM	ENSG00000206190.13	ENST00000673716.1	1759	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.65168384389875	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCATGAATGGTCTCCAT	-5	True	NA	-5	True	ATTAAA	-20	NA	25863343	25719149	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_25719299_25721656_25721910_25723890_25724022_25725950_25726083_25727159_25727267_25736055_25736142_25781018_25781224_25862647
H1_mix_00030267	chr15	-	4510	7	FSM	ENSG00000166206.15	ENST00000636466.1	4509	7	12	-13	12	0	multi-exon	FALSE	canonical	0	0	junction_6	384.245870360228	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTAGTCCTGTCTTTCCA	8867	False	NA	-7	True	AATAAA	-13	NA	26772318	26544784	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_26548135_26560931_26561177_26567580_26567734_26580318_26580457_26583331_26583415_26621313_26621535_26771998
H1_mix_00030268	chr15	-	674	1	FSM	ENSG00000278840.1	ENST00000621819.1	340	1	-337	3	-337	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACCTAAGACTTTAGTGAT	NA	False	NA	-9	True	ATTAAA	-15	NA	26558274	26557600	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_26557600_26558300
H1_mix_00030271	chr15	-	2131	1	FSM	ENSG00000260053.2	ENST00000566803.2	2184	1	87	-34	87	34	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATGCAAAACAGTACTGT	NA	False	NA	NA	False	NA	NA	NA	28508721	28506590	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_28506600_28508700
H1_mix_00030272	chr15	-	377	1	FSM	ENSG00000259644.1	ENST00000560740.1	1346	1	750	219	750	-219	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAGCAGCCCCCTCAGT	NA	False	NA	NA	False	NA	NA	NA	29728781	29728404	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_29728400_29728800
H1_mix_00030273	chr15	-	3713	1	FSM	ENSG00000279417.1	ENST00000623470.1	3930	1	93	124	93	-124	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAGAAATAAAGATGTTCT	NA	False	NA	NA	False	AATGAA	-1	NA	30348143	30344430	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_30344400_30348100
H1_mix_00030274	chr15	-	2698	3	NIC	ENSG00000166664.15	novel	1618	5	NA	NA	983	237	combination_of_known_splicesites	FALSE	canonical	2	9	junction_1	10	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCGGTTTTTTTTTTCTGT	NA	False	NA	NA	False	NA	NA	NA	30372274	30360328	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_30362812_30371097_30371185_30372146
H1_mix_00030275	chr15	-	2679	1	FSM	ENSG00000270016.1	ENST00000602595.1	499	1	-2551	371	-2551	-371	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGCTGATGTTCCACTT	NA	False	NA	NA	False	NA	NA	NA	30610744	30608065	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_30608100_30610700
H1_mix_00030276	chr15	-	2720	8	NNC	ENSG00000223509.8	novel	1613	7	NA	NA	1388	2450	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	11.8425038720358	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCAGTTTTCTGGTTTGA	NA	False	NA	NA	False	AATAAA	-16	NA	32535538	32517397	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_32518898_32522447_32522568_32523028_32523214_32526812_32526979_32528531_32528702_32529782_32529939_32533211_32533369_32535272
H1_mix_00030277	chr15	-	1164	6	NNC	ENSG00000134153.10	novel	1069	5	NA	NA	0	10881	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	261.563453104596	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGGAGGTGGAGCTTGCAG	1	True	NA	NA	False	NA	NA	NA	34101862	34073135	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_34073231_34084016_34084487_34088052_34088134_34090316_34090456_34095894_34096015_34101603
H1_mix_00030278	chr15	-	1035	6	NNC	ENSG00000134153.10	novel	1069	5	NA	NA	0	10027	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	261.563453104596	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAGAAGAAGAAAAAAGAAA	116	False	NA	NA	False	NA	NA	NA	34101807	34073989	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_34074016_34084021_34084487_34088052_34088134_34090316_34090456_34095894_34096015_34101603
H1_mix_00030279	chr15	-	5111	25	FSM	ENSG00000140199.13	ENST00000559664.5	5111	25	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	6.76066544226397	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTGTCAGTGTATACTT	-6	True	NA	-16	True	TTTAAA	-9	NA	34337786	34233258	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34233973_34235180_34235315_34236014_34236200_34236707_34236816_34237418_34237551_34238231_34238332_34238964_34239161_34240660_34240830_34241232_34241338_34242101_34242222_34243973_34244073_34245284_34245404_34245692_34245868_34250297_34250356_34250630_34250730_34250898_34251058_34252169_34252385_34254347_34254590_34255261_34255393_34256228_34256284_34257641_34257789_34258812_34258945_34260925_34261021_34275344_34275390_34336409
H1_mix_00030282	chr15	-	537	3	NNC	ENSG00000182117.6	novel	507	2	NA	NA	0	14861	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2788	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCAGTTGTGGTGGTGTG	4	True	NA	NA	False	AAAAAG	-1	NA	34343136	34326857	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_34326887_34341717_34342109_34343019
H1_mix_00030284	chr15	-	303	1	FSM	ENSG00000259904.1	ENST00000570019.1	1063	1	418	342	418	-342	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTTCCTGGGCATGGAA	5045	False	NA	NA	False	NA	NA	NA	34374185	34373882	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_34373900_34374200
H1_mix_00030286	chr15	-	6015	14	ISM	ENSG00000215252.12	ENST00000342314.9	4335	16	1087	15	1087	-15	intron_retention	FALSE	canonical	3	116	junction_13	38.2444643478561	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATACTGTGCAAATACTG	1086	False	NA	-21	True	ATTAAA	-5	NA	34534923	34525221	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr15_-_34527835_34527921_34528078_34528188_34528290_34528371_34528473_34528606_34528751_34529017_34529275_34529661_34529750_34529966_34530075_34530181_34530269_34531268_34531379_34531474_34531560_34531647_34531696_34531960_34532000_34532845
H1_mix_00030287	chr15	-	515	2	FSM	ENSG00000134138.20	ENST00000559972.1	541	2	26	0	17	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTCATTTTTCATCAAG	1725	False	NA	NA	False	NA	NA	NA	36895261	36892055	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_36892460_36895150
H1_mix_00030288	chr15	-	2757	12	FSM	ENSG00000150667.8	ENST00000350221.4	2816	12	30	29	30	-29	multi-exon	FALSE	canonical	1	4	junction_8	3.3153786416019	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATAAAATTTGAGTGATG	15	True	NA	NA	False	NA	NA	NA	39782811	39600059	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_39600927_39617734_39618246_39713443_39713582_39726588_39726748_39738090_39738202_39739664_39739790_39741804_39741901_39763820_39763915_39765591_39765747_39770426_39770611_39776398_39776532_39782627
H1_mix_00030290	chr15	-	2298	1	FSM	ENSG00000176753.5	ENST00000559727.1	1194	1	1	-1105	1	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAAATGAACTGGTATTC	7	False	NA	NA	False	AATAAA	-21	NA	40252968	40250670	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40250700_40253000
H1_mix_00030291	chr15	-	487	4	FSM	ENSG00000137841.12	ENST00000560093.1	563	4	76	0	76	0	multi-exon	FALSE	canonical	1	1	junction_3	2.49443825784929	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGGAAACCCCCTGACGAG	8726	False	NA	NA	False	NA	NA	NA	40299213	40298293	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40298381_40298561_40298709_40298797_40298965_40299127
H1_mix_00030292	chr15	-	505	1	FSM	ENSG00000244251.1	ENST00000489027.1	564	1	148	-89	148	89	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATTGATTTGGGAAAAAAA	174	False	NA	NA	False	AATAAA	-5	NA	40481167	40480662	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40480700_40481200
H1_mix_00030293	chr15	-	1071	3	FSM	ENSG00000128891.16	ENST00000558871.1	1075	3	4	0	-3	0	multi-exon	FALSE	canonical	3	56	junction_2	3.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGATCTGCCTGCCTCGGC	-16	True	NA	NA	False	NA	NA	NA	40565038	40556620	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_40557373_40562771_40563028_40564975
H1_mix_00030300	chr15	-	6389	37	NNC	ENSG00000128908.18	novel	6365	36	NA	NA	0	58479	intron_retention	TRUE	non_canonical	0	0	junction_1	15.5196013058119	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGAGAATGAAGAGAGGCA	-25	True	NA	NA	False	AAAAAG	-3	NA	41116280	40920400	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_40920429_40978883_40980441_40982861_40983078_40983761_40983922_40984196_40984353_40985337_40985427_40987090_40987194_40987815_40987975_40997528_40997602_41005592_41005688_41016087_41016216_41020899_41021126_41027595_41027737_41044903_41045076_41047407_41047502_41048211_41048277_41049286_41049421_41049934_41050103_41053928_41054015_41055246_41055365_41056621_41056707_41058638_41058782_41059866_41059927_41069569_41069666_41070466_41070548_41071848_41072059_41073427_41073496_41074369_41074566_41079700_41079905_41081019_41081074_41085368_41085584_41087561_41087683_41092026_41092183_41095600_41095669_41095758_41095929_41096167_41096354_41115972
H1_mix_00030301	chr15	-	6230	36	NNC	ENSG00000128908.18	novel	5991	37	NA	NA	0	-5	intron_retention	FALSE	canonical	1	1	junction_4	15.556978878842	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAATTGAGGTGTCTGTGG	-2	True	NA	-5	True	AATAAA	-21	NA	41116153	40978884	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_40980441_40982861_40983078_40983761_40983922_40984196_40984350_40985337_40985427_40987090_40987194_40987815_40987975_40997528_40997602_41005592_41005688_41016087_41016216_41020899_41021126_41027595_41027737_41044903_41045076_41047407_41047502_41048211_41048277_41049286_41049421_41049934_41050103_41053928_41054015_41055246_41055365_41056621_41056707_41058638_41058782_41059866_41059927_41069569_41069666_41070466_41070548_41071848_41072059_41073427_41073496_41074369_41074566_41079700_41079905_41081019_41081074_41085368_41085584_41087561_41087683_41092026_41092183_41095600_41095669_41095758_41095929_41096167_41096354_41115972
H1_mix_00030308	chr15	-	6132	6	NIC	ENSG00000140265.14	novel	6055	6	NA	NA	26	-2	combination_of_known_junctions	FALSE	canonical	3	19	junction_2	23.7200337267888	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCCTGGTGTTTCTTGA	22	True	NA	-15	True	AATAAA	-14	NA	43371017	43358176	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_43361942_43363914_43364488_43366109_43366809_43368922_43369128_43369595_43370026_43370557
H1_mix_00030309	chr15	-	4253	2	NIC	ENSG00000140265.14	novel	1389	3	NA	NA	23	-939	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGGTTAAATTATGATAG	19	True	NA	NA	False	NA	NA	NA	43371020	43359113	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_43361942_43369595
H1_mix_00030314	chr15	-	1425	1	Genic_Genomic	ENSG00000259479.6	novel	NA	NA	NA	NA	1880	320	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACCCAGGAATCCTGACA	NA	False	NA	NA	False	NA	NA	NA	44826851	44825426	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr15_-_44825400_44826900
H1_mix_00030317	chr15	-	2397	8	FSM	ENSG00000171766.17	ENST00000558362.5	3911	8	1509	5	0	-5	multi-exon	FALSE	canonical	3	131	junction_7	18.9111779924262	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGAATTTGGCATTGGTC	1793	False	NA	-12	True	AATAAA	-14	NA	45377035	45361130	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_45362222_45363899_45364017_45364796_45364861_45366045_45366211_45366370_45366509_45368069_45368261_45369325_45369522_45376600
H1_mix_00030319	chr15	-	2037	5	FSM	ENSG00000104177.19	ENST00000560530.5	2037	5	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_3	28.5744641244591	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTTATTTGTTGCTTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	48152274	48141795	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_48143072_48149031_48149084_48149162_48149372_48151472_48151572_48151873
H1_mix_00030320	chr15	-	2908	15	NIC	ENSG00000104177.19	novel	2958	16	NA	NA	-9	0	intron_retention	FALSE	non_canonical	0	0	junction_12	40.8956486882486	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGCTTATTTGTTGCTTT	10	True	NA	NA	False	ATTAAA	-19	NA	48178304	48141796	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_48143072_48149031_48149084_48149162_48149372_48151472_48151572_48151873_48151943_48152233_48152285_48153791_48153894_48157992_48158057_48158174_48158225_48158768_48158923_48159612_48159805_48165932_48166027_48167341_48167402_48168630_48168840_48178076
H1_mix_00030321	chr15	-	1814	9	NIC	ENSG00000104177.19	novel	1029	4	NA	NA	-9	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_6	59.8538584804689	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTACTATTTCACTGCAT	10	True	NA	-18	True	AATAAA	-13	NA	48178304	48157135	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_48157899_48157992_48158057_48158174_48158225_48158768_48158923_48159612_48159805_48165932_48166027_48167341_48167402_48168630_48168840_48178076
H1_mix_00030322	chr15	-	1258	5	NIC	ENSG00000104177.19	novel	736	5	NA	NA	8	464	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_2	76.8679874850383	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGTCCAAGAGTCTTTT	6	True	NA	1	True	AATAAA	-28	NA	48178308	48162230	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_48162894_48165932_48166027_48167341_48167402_48168630_48168840_48178076
H1_mix_00030333	chr15	-	803	3	NIC	ENSG00000140280.14	novel	1277	3	NA	NA	286	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	13.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGAGTCTCCTTTTTTTTT	751	False	NA	-4	True	AATAAA	-41	NA	51737369	51723068	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_51723650_51724789_51724992_51737349
H1_mix_00030339	chr15	-	4594	13	FSM	ENSG00000047346.13	ENST00000534964.6	4590	13	0	-4	0	0	multi-exon	FALSE	canonical	0	0	junction_2	12.899989233415	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTACTTGGCTTTTATTT	-12	True	NA	NA	False	AATATA	-20	NA	52678759	52581316	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_52582308_52584744_52584945_52587055_52587220_52593577_52593737_52600126_52600236_52601085_52601166_52605132_52605247_52608567_52610384_52611129_52611256_52611574_52611778_52613672_52613858_52678005_52678123_52678429
H1_mix_00030340	chr15	-	5098	13	NIC	ENSG00000047346.13	novel	4726	13	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_12	9.98749217771909	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTACTTGGCTTTTATTT	24	True	NA	NA	False	AATATA	-20	NA	52679358	52581316	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_52582308_52584744_52584945_52587150_52587220_52593577_52593737_52600126_52600236_52601085_52601166_52605132_52605247_52608567_52610384_52611129_52611256_52611574_52611778_52613672_52613858_52678005_52678123_52678429
H1_mix_00030341	chr15	-	4248	13	NIC	ENSG00000047346.13	novel	4217	13	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_12	11.2357934991506	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTACTTGGCTTTTATTT	13	False	NA	NA	False	AATATA	-20	NA	52709804	52581316	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_52582308_52584744_52584945_52587150_52587220_52593577_52593737_52600126_52600236_52601085_52601166_52605132_52605247_52608567_52610384_52611129_52611256_52611574_52611778_52613672_52613858_52678005_52678123_52709725
H1_mix_00030345	chr15	-	1540	6	FSM	ENSG00000137876.11	ENST00000677147.1	1540	6	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_4	821.949049515844	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTACAGTTTTAAGTATG	-12	True	NA	20	True	ATTAAA	-43	NA	55196937	55181159	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_55182226_55183314_55183401_55185361_55185426_55190974_55191048_55192710_55192834_55196809
H1_mix_00030354	chr15	-	587	4	FSM	ENSG00000137845.15	ENST00000558004.1	587	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	376.660176935243	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCCTCAGGGGGGCTGTG	7	True	NA	NA	False	CATAAA	-3	NA	58749774	58665181	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_58665198_58698279_58698405_58717576_58717728_58749479
H1_mix_00030358	chr15	-	1702	14	FSM	ENSG00000182718.18	ENST00000559956.6	1709	14	0	7	0	0	multi-exon	FALSE	canonical	1	4	junction_13	1082.77585959892	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCCTGAGTCACACAATCC	0	True	NA	-21	True	AATAAA	-15	NA	60397986	60347150	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60396279_60396428_60397942
H1_mix_00030359	chr15	-	1831	14	FSM	ENSG00000182718.18	ENST00000560468.6	1838	14	0	7	0	0	multi-exon	FALSE	canonical	1	4	junction_13	1082.77585959892	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCCTGAGTCACACAATCC	0	True	NA	-21	True	AATAAA	-15	NA	60397986	60347150	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60396150_60396428_60397942
H1_mix_00030371	chr15	-	4064	4	FSM	ENSG00000166794.6	ENST00000561048.2	4064	4	0	0	0	0	multi-exon	FALSE	canonical	3	5179	junction_3	164.140183989174	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTTTTTTTTTTTTAATA	-23	True	NA	NA	False	AATAAA	-10	NA	64163019	64155836	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_64156146_64156724_64160198_64162040_64162155_64162851
H1_mix_00030398	chr15	-	2316	7	FSM	ENSG00000128973.13	ENST00000638076.1	2323	7	7	0	-7	0	multi-exon	FALSE	canonical	1	1	junction_3	29.7134462640887	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGATTCAAGAATGAAGTAA	-33	True	NA	-44	True	NA	NA	NA	68229735	68207029	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_68208411_68209636_68209760_68211262_68211319_68211555_68211864_68214289_68214389_68218535_68218651_68229501
H1_mix_00030410	chr15	-	2561	12	NNC	ENSG00000067225.20	novel	2305	11	NA	NA	0	20466	intron_retention	FALSE	non_canonical	0	0	junction_1	4762.76294560553	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAGACAGCAATAATGACA	5919	False	NA	NA	False	AAAAAG	-6	NA	72231624	72178562	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_72178594_72199029_72199757_72200473_72200656_72202453_72202621_72206727_72206881_72207126_72207278_72208620_72208892_72209672_72209860_72210346_72210479_72217408_72217501_72218943_72219111_72231323
H1_mix_00030412	chr15	-	2891	24	NIC	ENSG00000137817.17	novel	2788	24	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_14	63.2371238864412	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATCACTGTGGTTTGAC	-7	True	NA	-6	True	AATAAA	-31	NA	72272554	72241180	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_72241558_72241900_72241986_72242156_72242221_72242619_72242700_72250019_72250093_72250844_72250955_72251206_72251256_72253436_72253505_72253949_72254071_72254454_72254521_72256464_72256591_72257347_72257441_72258036_72258133_72259607_72259662_72260537_72260689_72261557_72261708_72264554_72264622_72265080_72265172_72265412_72265474_72265896_72265992_72266744_72266823_72267474_72267672_72271022_72271288_72272280
H1_mix_00030413	chr15	-	2660	23	NIC	ENSG00000137817.17	novel	2788	24	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	51.2837874918003	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGATCACTGTGGTTTG	-11	True	NA	-8	True	AATAAA	-29	NA	72272558	72241182	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_72241558_72241900_72241986_72242156_72242221_72242619_72242700_72250019_72250093_72250844_72250955_72251206_72251256_72253436_72253505_72254454_72254521_72256464_72256591_72257347_72257441_72258036_72258133_72259607_72259662_72260537_72260689_72261557_72261708_72264554_72264622_72265080_72265172_72265412_72265474_72265896_72265992_72266744_72266823_72267474_72267672_72271022_72271288_72272392
H1_mix_00030414	chr15	-	2786	23	NIC	ENSG00000137817.17	novel	2788	24	NA	NA	-97	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	61.4646979241669	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGATCACTGTGGTTTG	339	False	72272680	-8	True	AATAAA	-29	NA	72272668	72241182	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_72241558_72241900_72241986_72242156_72242221_72242619_72242700_72249244_72249315_72250019_72250093_72250844_72250955_72251206_72251256_72253436_72253505_72254454_72254521_72256464_72256591_72257347_72257441_72258036_72258133_72260537_72260689_72261557_72261708_72264554_72264622_72265080_72265172_72265412_72265474_72265896_72265992_72266744_72266823_72267474_72267672_72271022_72271288_72272392
H1_mix_00030431	chr15	-	12125	9	NIC	ENSG00000173517.11	novel	12003	10	NA	NA	-207	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	5.63332716962187	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACAAATGCTTGTCCTTT	779	False	NA	-5	True	AATAAA	-25	NA	77420351	77108157	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr15_-_77115320_77133004_77133751_77158502_77158697_77178789_77182041_77252366_77252527_77284957_77285079_77286422_77286505_77365162_77365226_77420005
H1_mix_00030450	chr15	-	634	2	FSM	ENSG00000237550.6	ENST00000418824.3	636	2	0	2	0	-2	multi-exon	FALSE	canonical	2	33	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTTGTTCAAGCACAAT	-7	True	NA	0	True	AATAAA	-31	NA	82372912	82372197	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr15_-_82372417_82372497
H1_mix_00030470	chr15	-	3885	19	NNC	ENSG00000166813.16	novel	4567	19	NA	NA	-2	-591	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_18	27.4203673062539	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCCGTTACCCTTGACCT	2	True	NA	NA	False	NA	NA	NA	89655453	89628641	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr15_-_89628787_89628975_89629123_89629374_89629574_89630286_89630494_89631494_89631711_89632819_89632997_89633140_89633267_89633685_89633884_89642202_89642406_89645012_89645163_89645335_89645452_89645892_89646027_89646829_89647058_89647595_89647713_89648254_89648775_89648973_89649368_89649740_89649942_89652602_89652955_89655398
H1_mix_00030486	chr15	+	5180	1	Intergenic	novelGene_458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCCTTTGCATCAAGAT	NA	False	NA	NA	False	NA	NA	NA	20368930	20374110	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_20368900_20374100
H1_mix_00030487	chr15	+	5310	1	Intergenic	novelGene_459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTCCAAAAAGAGAGTCAG	9625	False	NA	NA	False	NA	NA	NA	24685399	24690709	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_24685400_24690700
H1_mix_00030488	chr15	+	918	1	Intergenic	novelGene_473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTGCTACCAATAATCTG	4179	False	NA	NA	False	NA	NA	NA	40180658	40181576	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_40180700_40181600
H1_mix_00030489	chr15	+	255	1	Intergenic	novelGene_475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTTTATTATTAAATAA	2010	False	NA	NA	False	NA	NA	NA	40596320	40596575	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_40596300_40596600
H1_mix_00030490	chr15	+	300	1	Intergenic	novelGene_476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGTGGCATTTTAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	40878105	40878405	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr15_+_40878100_40878400
H1_mix_00030499	chr16	+	1087	5	FSM	ENSG00000161981.11	ENST00000293861.8	1087	5	0	0	0	0	multi-exon	FALSE	canonical	3	921	junction_2	50.8004675175337	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGGAGCTCACAGTGGCA	-31	True	NA	14	True	AATAAA	-25	NA	53827	57669	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_54059_55458_55550_55776_55883_56538_56614_57085
H1_mix_00030501	chr16	+	819	1	FSM	ENSG00000278995.1	ENST00000624755.1	279	1	-540	0	-540	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATAAACAGCCTTGTTGC	2466	False	NA	-23	True	NA	NA	NA	74142	74961	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_74100_75000
H1_mix_00030502	chr16	+	1048	4	FSM	ENSG00000103152.12	ENST00000356432.8	1036	4	-16	4	-16	0	multi-exon	FALSE	canonical	3	417	junction_1	29.2612751298063	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGTGCCTTAGCCAGA	-28	True	NA	24	True	AATAAA	-15	NA	78208	85842	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_78334_79424_79701_83051_83257_85400
H1_mix_00030503	chr16	+	1206	5	FSM	ENSG00000103152.12	ENST00000219431.4	1193	5	-13	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	223.804602276182	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGTGCCTTAGCCAGA	7	True	NA	24	True	AATAAA	-15	NA	78243	85842	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_78334_79138_79332_79424_79701_83051_83257_85400
H1_mix_00030504	chr16	+	565	3	FSM	ENSG00000188536.13	ENST00000251595.11	576	3	11	0	-3	0	multi-exon	FALSE	canonical	3	13	junction_2	1.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTGTGCCTGGGTTC	9	False	NA	NA	False	AATAAA	-17	NA	172886	173710	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_173008_173124_173330_173471
H1_mix_00030505	chr16	+	577	3	FSM	ENSG00000206172.8	ENST00000320868.9	577	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	2.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTGTGCCTGAGTTT	0	True	NA	NA	False	AATAAA	-17	NA	176679	177522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_176812_176928_177134_177282
H1_mix_00030506	chr16	+	534	3	FSM	ENSG00000086506.3	ENST00000199708.3	528	3	-6	0	-6	0	multi-exon	FALSE	canonical	3	34	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTCTTGCCGTGCTCTCT	-16	True	NA	9	True	AGTAAA	-17	NA	180452	181179	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_180582_180665_180871_180979
H1_mix_00030508	chr16	+	383	3	FSM	ENSG00000167930.17	ENST00000426695.5	374	3	-9	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	297	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTCTTTCATTGTTTC	0	True	NA	NA	False	NA	NA	NA	234817	254565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_234858_249548_249655_254328
H1_mix_00030510	chr16	+	2912	13	FSM	ENSG00000167930.17	ENST00000399932.8	2909	13	-3	0	0	0	multi-exon	FALSE	canonical	3	614	junction_1	93.3518954756083	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGTGGTCAGGCGTGAG	0	True	NA	15	True	AATAAA	-23	NA	234817	266096	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_234858_249548_249655_254380_254682_259482_259600_259968_260161_261383_261515_262092_262226_262423_262554_263261_263403_263699_263776_264015_264172_264613_264717_264810
H1_mix_00030511	chr16	+	1006	7	FSM	ENSG00000167930.17	ENST00000420046.5	1006	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	428.532638456188	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGAGGAGGTACATCCCAG	26	True	NA	NA	False	NA	NA	NA	234843	261505	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_234858_248243_248398_249548_249655_254380_254682_259482_259600_259968_260161_261383
H1_mix_00030512	chr16	+	624	2	FSM	ENSG00000167930.17	ENST00000496874.1	598	2	-26	0	-26	0	multi-exon	FALSE	canonical	3	910	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGGATCCAAGATGTTCT	-2	True	NA	NA	False	TATAAA	-5	NA	254095	259520	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_254682_259482
H1_mix_00030516	chr16	+	964	6	FSM	ENSG00000242173.10	ENST00000219409.8	964	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	4.58693797647189	936	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGGTGTCGTCTCTTT	-7	True	NA	14	True	ATTAAA	-22	NA	280590	283010	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_280754_281745_281926_282024_282109_282296_282374_282466_282531_282614
H1_mix_00030517	chr16	+	788	3	FSM	ENSG00000236829.9	ENST00000412293.5	1715	3	8	919	8	-919	multi-exon	TRUE	canonical	3	3	junction_2	11.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCCACTCTGCACCTCC	NA	False	NA	NA	False	NA	NA	NA	382104	392041	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_382478_383289_383430_391766
H1_mix_00030518	chr16	+	322	1	FSM	ENSG00000236829.9	ENST00000435229.1	471	1	-170	319	-170	-319	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGACGCCGGAGGCGGC	NA	False	NA	NA	False	CATAAA	-43	NA	386592	386914	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_386600_386900
H1_mix_00030519	chr16	+	1248	5	FSM	ENSG00000103202.13	ENST00000397722.5	1232	5	-16	0	-16	0	multi-exon	FALSE	canonical	2	9	junction_1	972.644944211401	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACCCAGTTCCATAACGT	NA	False	NA	12	True	AGTAAA	-13	NA	396708	400746	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_397080_398989_399124_399378_399481_399626_399740_400218
H1_mix_00030520	chr16	+	1193	6	FSM	ENSG00000103202.13	ENST00000620944.4	1193	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	1062.96464663694	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCCATAACGTTGTTGGA	-4	True	NA	19	True	AGTAAA	-20	NA	397191	400753	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_397314_398207_398395_398989_399124_399378_399481_399626_399740_400218
H1_mix_00030521	chr16	+	904	4	FSM	ENSG00000103202.13	ENST00000621774.4	904	4	0	0	0	0	multi-exon	TRUE	canonical	2	83	junction_2	882.056813488917	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCCATAACGTTGTTGGA	-4	True	NA	19	True	AGTAAA	-20	NA	397191	400753	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_397314_398989_399124_399626_399740_400218
H1_mix_00030522	chr16	+	1007	5	FSM	ENSG00000103202.13	ENST00000219479.7	1000	5	-7	0	0	0	multi-exon	FALSE	canonical	3	1786	junction_1	233.536934980315	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCATAACGTTGTTGGAT	-4	True	NA	20	True	AGTAAA	-21	NA	397191	400754	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_397314_398989_399124_399378_399481_399626_399740_400218
H1_mix_00030523	chr16	+	1553	9	FSM	ENSG00000242612.7	ENST00000219481.10	1551	9	-2	0	0	0	multi-exon	FALSE	canonical	3	113	junction_3	42.3489964461969	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTATCGTTTAGGGGTTGT	-3	True	NA	13	True	ATTAAA	-16	NA	401882	412482	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_402044_404955_405025_406345_406398_407424_407561_410242_410368_410690_410785_410971_411077_411360_411579_411889
H1_mix_00030524	chr16	+	1444	6	ISM	ENSG00000242612.7	ENST00000437024.5	1738	11	5229	113	198	4	3prime_fragment	FALSE	canonical	3	154	junction_1	28.1382302215331	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTAGTGCGTTTTCTTAA	1060	False	NA	25	True	CATAAA	-18	NA	407143	412374	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_407561_410242_410368_410690_410785_410971_411077_411360_411579_411889
H1_mix_00030525	chr16	+	721	6	FSM	ENSG00000242612.7	ENST00000429116.1	721	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	92.3181455619641	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGGAGAGCACCAATCTG	259	False	NA	NA	False	NA	NA	NA	407426	411928	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_407561_410242_410405_410690_410754_410971_411077_411360_411579_411889
H1_mix_00030526	chr16	+	2062	4	FSM	ENSG00000242612.7	ENST00000461749.1	2062	4	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_1	20.5480466765633	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTATCGTTTAGGGGTTG	2431	False	NA	12	True	ATTAAA	-15	NA	409598	412481	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_410368_410690_410785_410971_411579_411889
H1_mix_00030528	chr16	+	4801	14	FSM	ENSG00000090565.17	ENST00000262305.9	4801	14	0	0	0	0	multi-exon	FALSE	canonical	1	51	junction_3	33.6524175520956	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTGGTGCGCACCTATA	13	True	NA	5	True	AATAAA	-13	NA	425648	523011	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_426721_461403_461498_471294_471390_482524_482737_488850_489001_496823_496860_503003_503098_505523_505628_510659_510801_518942_519025_519753_519892_520121_520278_520458_520600_520725
H1_mix_00030529	chr16	+	5016	14	NNC	ENSG00000103326.12	novel	4888	14	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_11	80.3778061157204	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACGCCTCCTCCTCCTGCT	-36	True	NA	22	True	AATAAA	-18	NA	527726	554636	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_528030_533945_533999_540092_540372_546816_548288_548992_549202_549287_549472_549614_549839_551301_551428_551511_551665_552050_552213_552300_552531_552622_552772_552862_553042_553342
H1_mix_00030530	chr16	+	4881	14	FSM	ENSG00000103326.12	ENST00000219611.7	4888	14	7	0	2	0	multi-exon	FALSE	canonical	3	20	junction_2	68.5289210315723	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACGCCTCCTCCTCCTGCT	-44	True	NA	22	True	AATAAA	-18	NA	527718	554636	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_528030_533945_533999_536028_536143_546816_548288_548992_549202_549287_549472_549614_549839_551301_551428_551511_551665_552050_552213_552300_552531_552604_552772_552862_553042_553338
H1_mix_00030531	chr16	+	4653	13	NIC	ENSG00000103326.12	novel	4888	14	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	135	junction_2	29.1704759417234	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACGCCTCCTCCTCCTGCT	70	False	NA	22	True	AATAAA	-18	NA	527832	554636	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_528030_533945_533999_546816_548288_548992_549202_549287_549472_549614_549839_551301_551428_551511_551665_552050_552213_552300_552531_552604_552772_552862_553042_553338
H1_mix_00030532	chr16	+	4932	14	NNC	ENSG00000103326.12	novel	4888	14	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_3	66.8769956291302	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACGCCTCCTCCTCCTGCT	70	False	NA	22	True	AATAAA	-18	NA	527832	554636	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_528030_533945_533999_540092_540372_546816_548288_548992_549202_549287_549472_549614_549839_551301_551428_551511_551665_552050_552213_552300_552531_552604_552772_552862_553042_553338
H1_mix_00030533	chr16	+	540	2	FSM	ENSG00000103326.12	ENST00000568402.1	540	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGGGAGTGTCGGAAATG	2907	False	NA	NA	False	NA	NA	NA	536861	537639	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_536896_537133
H1_mix_00030535	chr16	+	2243	3	FSM	ENSG00000161992.6	ENST00000409413.4	2245	3	1	1	1	-1	multi-exon	FALSE	canonical	3	7	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACGCCGTCTGTGCCTCCT	0	True	NA	NA	False	ATTAAA	-16	NA	560394	565528	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_560662_563255_564377_564673
H1_mix_00030536	chr16	+	2106	2	FSM	ENSG00000257108.2	ENST00000424439.3	2096	2	-10	0	-10	0	multi-exon	FALSE	canonical	2	2	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGGGCTGGGGTCTTGT	3605	False	NA	NA	False	AATAAA	-16	NA	566994	569495	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_567076_567470
H1_mix_00030537	chr16	+	2244	4	FSM	ENSG00000007541.17	ENST00000422307.6	2052	4	-23	-169	-15	169	multi-exon	FALSE	canonical	3	218	junction_3	11.7756811551038	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGTCTCTACTAAAAATACAA	-15	True	NA	NA	False	NA	NA	NA	569952	577403	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_570097_574065_574764_575838_575971_576133
H1_mix_00030538	chr16	+	2973	11	FSM	ENSG00000007541.17	ENST00000321878.10	2958	11	-15	0	-15	0	multi-exon	FALSE	canonical	3	125	junction_9	31.1576635837798	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCAGGCTCGGTCCCGGGT	-15	True	NA	18	True	AATAAA	-19	NA	569952	584109	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_570097_574065_574764_575838_575971_576133_576255_578378_578506_578784_578939_579068_579181_580182_580264_580857_580973_582247_582310_582882
H1_mix_00030542	chr16	+	2202	5	FSM	ENSG00000007541.17	ENST00000480424.6	2202	5	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_3	38.6684626019706	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGCAGGCTCGGTCCCGGG	4593	False	NA	17	True	AATAAA	-18	NA	578926	584108	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_578939_579068_579181_580182_580973_582247_582310_582882
H1_mix_00030543	chr16	+	1775	2	FSM	ENSG00000007541.17	ENST00000476438.1	1775	2	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGCAGGCTCGGTCCCGGG	1081	False	NA	17	True	AATAAA	-18	NA	581760	584108	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_582310_582882
H1_mix_00030545	chr16	+	2732	7	FSM	ENSG00000197562.10	ENST00000535977.5	2717	7	-15	0	-15	0	multi-exon	FALSE	canonical	3	7	junction_1	63.6727745761265	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTTTTGCTGTGTCTGGTG	13	False	NA	37	True	AGTAAA	-22	NA	589341	629271	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_589548_590260_590434_617207_617269_618199_618261_625431_625510_625898_626122_627341
H1_mix_00030546	chr16	+	2580	7	FSM	ENSG00000197562.10	ENST00000538492.5	2569	7	-11	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	34.5032204616065	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTTTTGCTGTGTCTGGTG	-21	True	NA	37	True	AGTAAA	-22	NA	590065	629271	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_590120_590260_590434_617207_617269_618199_618261_625431_625510_625898_626122_627341
H1_mix_00030547	chr16	+	2742	6	FSM	ENSG00000197562.10	ENST00000248139.8	2718	6	-24	0	-24	0	multi-exon	FALSE	canonical	3	167	junction_1	6.95701085237043	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACGTTTTGCTGTGTCTG	380	False	NA	34	True	AGTAAA	-19	NA	590041	629268	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_590434_617207_617269_618199_618261_625431_625510_625898_626122_627341
H1_mix_00030548	chr16	+	6266	8	Fusion	ENSG00000197562.10_ENSG00000127578.7	novel	2569	7	NA	NA	0	0	multi-exon	FALSE	canonical	3	86	junction_1	32.3084622768382	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCTGGCTTGCTGCTGC	-19	True	NA	20	True	AATAAA	-20	NA	590067	634116	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr16_+_590120_590260_590434_617207_617269_618199_618261_625431_625510_625898_626122_627341_631425_632581
H1_mix_00030549	chr16	+	2562	4	NIC	ENSG00000197562.10	novel	2718	6	NA	NA	23	0	intron_retention	FALSE	canonical	3	43	junction_1	62.2735899077611	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACGTTTTGCTGTGTCTG	13	True	NA	34	True	AGTAAA	-19	NA	590099	629268	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_590434_625431_625510_625898_626122_627341
H1_mix_00030551	chr16	+	2439	2	FSM	ENSG00000197562.10	ENST00000561781.1	2439	2	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTTGCTGTGTCTGGTGG	NA	False	NA	38	True	AGTAAA	-23	NA	625613	629272	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_626122_627341
H1_mix_00030553	chr16	+	1976	2	FSM	ENSG00000127578.7	ENST00000319070.3	1976	2	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGGCTTGCTGCTGCT	-2	True	NA	21	True	AATAAA	-21	NA	630984	634117	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_631425_632581
H1_mix_00030554	chr16	+	948	5	FSM	ENSG00000172366.20	ENST00000307650.9	931	5	-19	2	-19	-2	multi-exon	FALSE	canonical	3	284	junction_2	42.7631558704453	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGGAGTGTCTTTGA	-15	True	NA	21	True	AATAAA	-13	NA	641808	648472	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_642044_642119_642250_647416_647545_647782_647885_648119
H1_mix_00030555	chr16	+	1068	6	FSM	ENSG00000172366.20	ENST00000491999.5	1050	6	-18	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	139.308291210538	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGAGTGTCTTTGACT	4	True	NA	23	True	AATAAA	-15	NA	641827	648474	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_642044_642119_642250_646471_646609_647416_647545_647782_647885_648119
H1_mix_00030556	chr16	+	1379	5	FSM	ENSG00000172366.20	ENST00000615744.4	1379	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	165.25283658685	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGGAGCTCCAGGCTAAT	13	True	NA	-14	True	GGGGCT	-5	NA	642450	648437	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_643145_646471_646609_647416_647545_647782_647885_648119
H1_mix_00030557	chr16	+	1728	1	FSM	ENSG00000172366.20	ENST00000575894.1	1728	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGAGTGTCTTTGACT	3844	False	NA	23	True	AATAAA	-15	NA	646746	648474	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_646700_648500
H1_mix_00030559	chr16	+	5583	41	FSM	ENSG00000161996.19	ENST00000549091.5	5589	41	0	6	0	-2	multi-exon	TRUE	canonical	3	23	junction_1	24.8430573802823	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTATTGCTGCATTGTTG	-40	True	NA	30	True	AATAAA	-15	NA	649324	667827	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_649427_649762_649855_649990_650168_650253_650363_650538_650710_650994_651104_651198_651267_651643_651748_651826_652040_652466_652536_653340_653452_653524_653671_653745_653804_655028_655148_655306_655469_655572_655704_655772_655890_656301_656538_656731_656872_657090_657222_657761_657893_658182_658345_658524_658654_658895_659012_659085_659127_659244_659377_660057_660162_660611_660715_661050_661173_661341_661502_661596_661788_661890_662060_662219_662332_662672_662845_665678_665802_665949_666125_666219_666351_666454_666599_666672_666793_666904_666990_667431
H1_mix_00030560	chr16	+	2345	17	FSM	ENSG00000161996.19	ENST00000549648.5	2345	17	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	11.4673449411797	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGGAGTGCATTTGCTG	-12	True	NA	NA	False	NA	NA	NA	649352	656201	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_649427_649762_649855_649990_650168_650253_650363_650538_650710_650994_651104_651198_651267_651643_651748_651823_652040_652466_652536_653340_653452_653524_653671_653745_653804_655028_655148_655306_655469_655572_655704_655772
H1_mix_00030562	chr16	+	5549	41	FSM	ENSG00000161996.19	ENST00000293879.9	5540	41	-12	3	0	-2	multi-exon	FALSE	canonical	2	7	junction_33	26.1717404847289	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTATTGCTGCATTGTTG	-12	True	NA	30	True	AATAAA	-15	NA	649352	667827	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_649427_649762_649855_649990_650168_650253_650363_650538_650710_650994_651104_651198_651267_651643_651748_651826_652040_652466_652536_653340_653452_653524_653671_653745_653804_655028_655148_655306_655469_655572_655704_655772_655890_656301_656538_656731_656872_657090_657222_657761_657893_658182_658345_658524_658654_658895_659012_659085_659127_659244_659377_660057_660162_660611_660715_661050_661173_661341_661502_661596_661788_661890_662060_662219_662332_662678_662845_665678_665802_665949_666125_666219_666351_666454_666599_666672_666793_666904_666990_667431
H1_mix_00030569	chr16	+	1672	7	FSM	ENSG00000161996.19	ENST00000547944.5	1672	7	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	8.25967446224258	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGCTGCATTGTTGCAC	NA	False	NA	33	True	AATAAA	-18	NA	665183	667830	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_665802_665949_666125_666219_666351_666454_666599_666672_666793_666904_666990_667431
H1_mix_00030570	chr16	+	619	3	FSM	ENSG00000161996.19	ENST00000551100.1	623	3	0	4	0	-2	multi-exon	FALSE	canonical	2	4	junction_2	51.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTATTGCTGCATTGTTG	NA	False	NA	30	True	AATAAA	-15	NA	666495	667827	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_666599_666672_666793_667431
H1_mix_00030576	chr16	+	2498	19	FSM	ENSG00000140983.14	ENST00000315082.9	2490	19	-8	0	0	0	multi-exon	TRUE	canonical	3	612	junction_10	159.400961937708	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTGTTGTTTGTCTTTA	5	True	NA	12	True	NA	NA	NA	668123	674171	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_668237_668352_668412_668487_668570_668655_668700_669552_669607_670122_670176_670248_670358_670455_670558_670674_670774_670891_671001_671082_671204_671696_671782_671859_672003_672083_672182_672253_672385_672488_672567_672702_672826_672927_673131_673479
H1_mix_00030583	chr16	+	3100	11	FSM	ENSG00000140983.14	ENST00000568636.5	3098	11	-2	0	-2	0	multi-exon	FALSE	canonical	3	211	junction_2	300.817486193871	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCGGATCCCAGTCTCTG	488	False	NA	28	True	ATTAAA	-19	NA	668655	674125	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_668700_669552_670176_670265_670358_670455_670558_670674_670774_670891_671204_671696_671782_671859_672182_672253_672826_672927_673131_673479
H1_mix_00030586	chr16	+	1802	8	FSM	ENSG00000103269.14	ENST00000352681.8	1458	8	-345	1	-345	0	multi-exon	FALSE	canonical	3	18	junction_3	4.20883424647321	1248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGGGGGCTGTCCCGGGC	5718	False	NA	14	True	AATAAA	-14	NA	675325	678267	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_675830_676335_676498_676671_676897_676970_677120_677275_677389_677458_677560_677638_677700_677780
H1_mix_00030588	chr16	+	1560	7	FSM	ENSG00000103269.14	ENST00000219551.2	1560	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	4.3493294502333	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGGGGCTGTCCCGGGCT	391	False	NA	15	True	AATAAA	-15	NA	676074	678268	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_676498_676671_676897_676970_677120_677275_677389_677458_677560_677638_677700_677780
H1_mix_00030589	chr16	+	2234	5	FSM	ENSG00000103266.11	ENST00000569248.5	1853	5	-381	0	-186	0	multi-exon	FALSE	canonical	3	1295	junction_4	35.5272782520699	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTGTGTAATAAAATCCG	489	False	NA	-9	True	NA	NA	NA	680037	682717	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_681351_681437_681604_681792_682077_682164_682282_682363
H1_mix_00030590	chr16	+	1340	7	FSM	ENSG00000103266.11	ENST00000219548.9	1340	7	0	0	0	0	multi-exon	FALSE	canonical	3	1250	junction_4	50.1386965216377	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGGTGGAGATGAAGACG	-5	True	NA	12	True	NA	NA	NA	680409	682801	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_680685_681151_681351_681437_681604_681792_681881_682019_682077_682164_682282_682363
H1_mix_00030592	chr16	+	3333	4	FSM	ENSG00000103260.9	ENST00000568223.7	3322	4	-11	0	-11	0	multi-exon	FALSE	canonical	3	164	junction_1	20.2374789822141	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTGGCATGCATCTGTA	-24	True	NA	NA	False	AATAAA	-20	NA	715106	719655	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_715394_715583_715985_716932_716993_717070
H1_mix_00030593	chr16	+	1344	3	FSM	ENSG00000103254.10	ENST00000568916.1	454	3	-972	82	119	0	multi-exon	FALSE	canonical	3	23	junction_2	95.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTAGTTCTGCCCCCATCC	116	False	NA	-65	True	NA	NA	NA	720699	722508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_721703_721800_721942_722308
H1_mix_00030594	chr16	+	1633	3	FSM	ENSG00000103254.10	ENST00000566525.5	1686	3	52	1	52	-1	multi-exon	FALSE	canonical	3	25	junction_2	94.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCTGACTCATGTTTTAT	49	False	NA	15	True	GATAAA	-15	NA	720632	722588	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_721703_721800_722084_722308
H1_mix_00030595	chr16	+	1088	4	FSM	ENSG00000103254.10	ENST00000564000.5	1088	4	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	24.1154629969146	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTATCCTGACTCATGTTT	513	False	NA	12	True	GATAAA	-12	NA	721096	722585	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_721437_721597_721703_721800_721942_722083
H1_mix_00030596	chr16	+	806	4	FSM	ENSG00000103254.10	ENST00000219535.7	806	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	79.851250598987	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTCTGTGGGTTCTATCC	-23	True	NA	0	True	NA	NA	NA	721141	722573	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_721437_721597_721703_721800_721942_722308
H1_mix_00030597	chr16	+	1215	5	FSM	ENSG00000103254.10	ENST00000569529.6	870	5	-362	17	203	0	multi-exon	FALSE	canonical	3	152	junction_4	25.3870045495722	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTCTGTGGGTTCTATCC	200	False	NA	0	True	NA	NA	NA	720783	722573	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_721437_721597_721703_721800_721942_722083_722135_722308
H1_mix_00030598	chr16	+	800	4	FSM	ENSG00000103254.10	ENST00000566437.1	800	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	78.9528692040736	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTAGTTCTGCCCCCATCC	60	False	NA	-65	True	NA	NA	NA	721224	722508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_721437_721597_721703_721800_722084_722308
H1_mix_00030599	chr16	+	1512	8	FSM	ENSG00000103253.19	ENST00000389703.8	1512	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	76.7556419517717	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCAGTGTTGGCAGATG	1	True	NA	9	True	AATAAA	-14	NA	727105	729715	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_727615_727964_728030_728115_728234_728315_728425_728503_728605_728793_728896_729008_729089_729287
H1_mix_00030600	chr16	+	1041	7	FSM	ENSG00000103253.19	ENST00000561546.5	1041	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	60.3123812606776	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGAGGCTGCTCATTAAG	120	False	NA	NA	False	NA	NA	NA	727245	729185	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_727615_727964_728030_728115_728234_728315_728425_728503_728605_728793_728896_729008
H1_mix_00030604	chr16	+	2119	2	FSM	ENSG00000103253.19	ENST00000569604.1	2162	2	0	43	0	-43	multi-exon	FALSE	canonical	2	6	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCGTCATCATCATCTC	4538	False	NA	-40	True	NA	NA	NA	733054	735482	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_733160_733468
H1_mix_00030605	chr16	+	475	3	FSM	ENSG00000127586.17	ENST00000570058.5	471	3	-4	0	0	0	multi-exon	TRUE	canonical	3	41	junction_2	230	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGCTTTGGGGCCACGG	-4	True	NA	NA	False	NA	NA	NA	788619	789340	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_788776_788930_789126_789216
H1_mix_00030608	chr16	+	4509	19	FSM	ENSG00000127586.17	ENST00000471202.5	4494	19	-15	0	0	0	multi-exon	TRUE	canonical	3	16	junction_4	135.44740676735	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACGTGCGAGTGGAGTG	-4	True	NA	27	True	TATAAA	-21	NA	788619	798072	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_788776_788930_789126_789209_789361_789546_789716_790006_790270_790346_790400_790524_792348_792438_792591_792717_792812_792965_793065_793143_793275_794053_794202_795131_795357_795684_795835_795946_796078_796716_796862_796960_797093_797693_797752_797838
H1_mix_00030609	chr16	+	3092	22	FSM	ENSG00000127586.17	ENST00000262315.14	3092	22	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_8	90.0398500841411	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGTGCGAGTGGAGTGGG	-4	True	NA	29	True	TATAAA	-23	NA	788619	798074	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_788776_788930_789126_789209_789361_789546_789716_790176_790270_790346_790400_790524_790667_791160_791371_791850_791949_792223_792348_792438_792591_792717_792812_792965_793065_793143_793275_794053_794202_795131_795357_795684_795835_795946_796078_796716_796862_796960_797093_797693_797752_797838
H1_mix_00030616	chr16	+	3102	3	FSM	ENSG00000005513.10	ENST00000293894.4	3087	3	-15	0	-15	0	multi-exon	FALSE	canonical	3	40	junction_1	4	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGGCTGCATTTTGTGTG	643	False	NA	22	True	ATTAAA	-19	NA	981754	986979	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_982345_983727_983961_984700
H1_mix_00030617	chr16	+	1365	1	FSM	ENSG00000162009.9	ENST00000293897.6	2629	1	16	1248	16	-1248	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGCTCCGCCATGCCGTG	15	False	NA	NA	False	GGGGCT	-33	NA	1078841	1080206	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1078800_1080200
H1_mix_00030619	chr16	+	8212	35	FSM	ENSG00000196557.13	ENST00000348261.11	8219	35	7	0	7	0	multi-exon	TRUE	canonical	0	0	junction_2	18.8883992518577	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACTTGGATTCCTGCCAT	5	True	NA	NA	False	AATAAA	-20	NA	1153112	1221768	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1153471_1153719_1154037_1194971_1195084_1195431_1195566_1195925_1196024_1198614_1198775_1200255_1200572_1200715_1200809_1201662_1202453_1204009_1204459_1205113_1205266_1206103_1206290_1207000_1207119_1207274_1207431_1207769_1207861_1208012_1208222_1209031_1209413_1210034_1210136_1210369_1210494_1210582_1210652_1210786_1210972_1211167_1211295_1211480_1211607_1211715_1211806_1211945_1212139_1212510_1212529_1213779_1213932_1214971_1215082_1215241_1215376_1215522_1215594_1216931_1217011_1217918_1218041_1218209_1218652_1218969_1219131_1219980
H1_mix_00030620	chr16	+	8163	34	NIC	ENSG00000196557.13	novel	8069	34	NA	NA	10	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	18.6468312559033	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGATTCCTGCCATCAGTC	8	True	NA	NA	False	AATAAA	-25	NA	1153115	1221773	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_1153471_1153719_1154037_1194971_1195084_1195431_1195566_1195925_1196024_1198614_1198775_1200255_1200572_1200715_1200809_1201662_1202453_1204009_1204459_1205113_1205266_1206103_1206290_1207000_1207119_1207274_1207431_1207769_1207861_1208012_1208222_1209031_1209413_1210034_1210136_1210369_1210494_1210582_1210652_1210786_1210972_1211167_1211295_1211480_1211607_1211715_1211806_1211945_1212139_1213779_1213932_1214971_1215082_1215241_1215376_1215522_1215594_1216931_1217011_1217918_1218041_1218209_1218652_1219002_1219131_1219980
H1_mix_00030621	chr16	+	8069	34	FSM	ENSG00000196557.13	ENST00000358590.8	8069	34	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	18.6607133363712	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGATTCCTGCCATCAG	40	False	NA	NA	False	AATAAA	-23	NA	1153240	1221771	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1153471_1153719_1154037_1194971_1195084_1195431_1195566_1195925_1196024_1198614_1198775_1200255_1200572_1200715_1200809_1201662_1202453_1204009_1204459_1205113_1205266_1206103_1206290_1207000_1207119_1207274_1207431_1207769_1207861_1208012_1208222_1209031_1209413_1210034_1210136_1210369_1210494_1210582_1210652_1210786_1210972_1211167_1211295_1211480_1211607_1211715_1211806_1211945_1212139_1213779_1213932_1214971_1215082_1215241_1215376_1215522_1215594_1216931_1217011_1217918_1218041_1218209_1218652_1218969_1219131_1219980
H1_mix_00030623	chr16	+	7444	33	NIC	ENSG00000196557.13	novel	8219	35	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_24	17.576145721901	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCACTTGGATTCCTGC	1101	False	NA	NA	False	AATAAA	-17	NA	1195028	1221765	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_1195084_1195431_1195566_1195925_1196024_1198614_1198775_1200255_1200572_1200715_1200809_1201662_1202453_1204009_1204459_1205113_1205266_1206103_1206290_1207000_1207119_1207274_1207431_1207769_1207861_1208012_1208222_1209031_1209413_1210034_1210136_1210369_1210494_1210582_1210652_1210786_1210972_1211167_1211295_1211480_1211607_1211715_1211806_1211945_1212139_1212510_1212529_1213779_1213932_1214971_1215082_1215241_1215376_1215522_1215594_1216931_1217011_1217918_1218041_1218209_1218652_1219002_1219131_1219980
H1_mix_00030626	chr16	+	7592	6	FSM	ENSG00000103275.21	ENST00000567074.6	3123	6	-4420	-49	-13	0	multi-exon	FALSE	canonical	3	1840	junction_2	172.063941603115	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGGCCTGCCGGGTGTGT	-25	True	NA	19	True	ATTAAA	-14	NA	1309139	1327017	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1314097_1314292_1314377_1315653_1315727_1320173_1320284_1320437_1320518_1324729
H1_mix_00030627	chr16	+	3604	8	FSM	ENSG00000103275.21	ENST00000397515.6	3109	8	-495	0	-13	0	multi-exon	TRUE	canonical	3	59	junction_1	934.562912133096	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGGCCTGCCGGGTGTGTC	-25	True	NA	20	True	ATTAAA	-15	NA	1309139	1327018	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1309774_1312346_1312604_1314019_1314097_1314292_1314377_1315653_1315727_1320173_1320284_1320437_1320518_1324729
H1_mix_00030628	chr16	+	3253	7	FSM	ENSG00000103275.21	ENST00000355803.8	3253	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	794.942083844268	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGGCCTGCCGGGTGTGTC	NA	False	NA	20	True	ATTAAA	-15	NA	1308879	1327018	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1309420_1314019_1314097_1314292_1314377_1315653_1315727_1320173_1320284_1320437_1320518_1324729
H1_mix_00030629	chr16	+	2845	7	FSM	ENSG00000103275.21	ENST00000325437.9	2832	7	-13	0	-13	0	multi-exon	FALSE	canonical	3	46	junction_1	786.541303570399	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGGCCTGCCGGGTGTGTC	-25	True	NA	20	True	ATTAAA	-15	NA	1309139	1327018	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1309272_1314019_1314097_1314292_1314377_1315653_1315727_1320173_1320284_1320437_1320518_1324729
H1_mix_00030630	chr16	+	3002	7	FSM	ENSG00000103275.21	ENST00000397514.8	2850	7	-152	0	-151	0	multi-exon	FALSE	canonical	3	1782	junction_1	199.951382979852	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGGCCTGCCGGGTGTGT	276	False	NA	19	True	ATTAAA	-14	NA	1309483	1327017	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1309774_1314019_1314097_1314292_1314377_1315653_1315727_1320173_1320284_1320437_1320518_1324729
H1_mix_00030631	chr16	+	3131	7	FSM	ENSG00000103275.21	ENST00000562470.3	3131	7	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	773.39978162799	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGGCCTGCCGGGTGTGT	1918	False	NA	19	True	ATTAAA	-14	NA	1312184	1327017	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1312604_1314019_1314097_1314292_1314377_1315653_1315727_1320173_1320284_1320437_1320518_1324729
H1_mix_00030632	chr16	+	5436	3	FSM	ENSG00000103275.21	ENST00000677987.1	5436	3	0	0	0	0	multi-exon	FALSE	canonical	3	2126	junction_2	123.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTAACCACTGTATCTA	3135	False	NA	-30	True	AGTAAA	-14	NA	1317166	1326968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1320284_1320437_1320518_1324729
H1_mix_00030633	chr16	+	4535	34	FSM	ENSG00000007516.14	ENST00000426824.8	4531	34	-4	0	-2	0	multi-exon	FALSE	canonical	2	12	junction_5	8.15258526264193	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTCTGCCGTTTCTTGA	-1	True	NA	11	True	AATATA	-18	NA	1333640	1349439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1333750_1338539_1338681_1338901_1338990_1339163_1339245_1339495_1339604_1340921_1340982_1341128_1341196_1341293_1341490_1341821_1341867_1341985_1342064_1342180_1342284_1342526_1342635_1342718_1342815_1342912_1343017_1343392_1343514_1344021_1344147_1344226_1344318_1344468_1344526_1344600_1344699_1344797_1344850_1344968_1345100_1345248_1345373_1345746_1345891_1345985_1346079_1346169_1346362_1346441_1346511_1346604_1346685_1346846_1346956_1347297_1347370_1347544_1347626_1347700_1347822_1347893_1348018_1348095_1348302_1348378
H1_mix_00030635	chr16	+	1993	11	FSM	ENSG00000090581.11	ENST00000204679.9	1975	11	-18	0	-18	0	multi-exon	FALSE	canonical	3	314	junction_2	27.9291961932312	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGACAGTAGCACAAAATATA	8517	False	NA	5	True	AATAAA	-20	NA	1351912	1364113	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1352018_1352101_1352160_1352238_1352307_1361742_1361798_1361871_1361956_1362037_1362132_1362205_1362321_1362451_1362535_1362610_1362743_1362824_1362907_1362996
H1_mix_00030637	chr16	+	2328	10	FSM	ENSG00000090581.11	ENST00000527168.6	2313	10	-15	0	0	0	multi-exon	FALSE	canonical	3	348	junction_1	19.5681777446678	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCTATTAAAAGTCTTTG	-16	True	NA	NA	False	GATAAA	-31	NA	1351930	1364387	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1352018_1352101_1352307_1361742_1361798_1361871_1361956_1362037_1362132_1362205_1362321_1362451_1362535_1362610_1362743_1362824_1362907_1362996
H1_mix_00030638	chr16	+	1261	10	FSM	ENSG00000090581.11	ENST00000529110.2	1002	10	0	-259	0	0	multi-exon	FALSE	canonical	3	314	junction_1	27.6717978285063	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTCTGGGTTAAGAAAAT	19	True	NA	4	True	AGTAAA	-15	NA	1351965	1363350	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1352160_1352238_1352307_1361742_1361798_1361871_1361956_1362037_1362132_1362205_1362321_1362451_1362535_1362610_1362743_1362824_1362907_1362996
H1_mix_00030639	chr16	+	3323	21	FSM	ENSG00000100726.15	ENST00000262319.11	3314	21	-9	0	7	0	multi-exon	TRUE	canonical	0	0	junction_7	77.7718458055356	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGGAGTGTTGGTGGCC	-22	True	NA	NA	False	AATAAA	-15	NA	1493350	1510454	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1493606_1494245_1494617_1495345_1495624_1497035_1497105_1497360_1497509_1499230_1499334_1500095_1500165_1500346_1500489_1500562_1500700_1501419_1501500_1501662_1501774_1502046_1502136_1502312_1502405_1502644_1502762_1502930_1503003_1505409_1505602_1506237_1506330_1506951_1507052_1507305_1507371_1507600_1507717_1509829
H1_mix_00030640	chr16	+	3755	21	NIC	ENSG00000100726.15	novel	3314	21	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	102.163728886528	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGGAGTGTTGGTGGCC	-21	True	NA	NA	False	AATAAA	-15	NA	1493351	1510454	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_1493606_1494280_1494617_1495345_1495624_1497035_1497105_1497360_1497509_1499230_1499334_1500095_1500165_1500346_1500489_1500562_1500700_1501419_1501500_1501662_1501774_1502046_1502136_1502312_1502405_1502644_1502762_1502930_1503003_1505409_1505602_1506237_1506330_1506483_1507052_1507305_1507371_1507600_1507717_1509829
H1_mix_00030641	chr16	+	1327	4	FSM	ENSG00000100726.15	ENST00000568240.1	1327	4	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_1	8.01387685344754	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGAGTGTTGGTGGCCGGT	NA	False	NA	NA	False	AATAAA	-18	NA	1506533	1510457	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1507052_1507305_1507371_1507600_1507717_1509829
H1_mix_00030642	chr16	+	7851	20	NIC	ENSG00000007545.16	novel	7972	21	NA	NA	5	0	intron_retention	FALSE	canonical	3	22	junction_14	13.0177802976589	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGACTGTCGTTTGTGCCT	-31	True	NA	23	True	CATAAA	-20	NA	1612364	1677906	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_1612658_1614638_1614986_1625972_1626167_1632211_1632366_1637823_1637908_1641138_1641188_1652495_1652582_1653032_1653157_1655218_1655301_1655876_1656993_1659885_1660064_1662489_1662672_1662760_1662836_1665056_1665139_1666421_1666601_1667334_1667401_1667961_1668185_1669000_1669166_1670663_1670810_1673880
H1_mix_00030643	chr16	+	8068	21	FSM	ENSG00000007545.16	ENST00000397412.8	7972	21	-98	2	-75	0	multi-exon	FALSE	canonical	3	18	junction_18	15.2826699238059	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGACTGTCGTTTGTGCCT	NA	False	NA	23	True	CATAAA	-20	NA	1612261	1677906	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1612658_1614638_1614986_1625972_1626167_1632211_1632366_1637823_1637908_1641138_1641188_1652495_1652582_1653032_1653157_1655218_1655301_1655876_1656993_1659885_1660064_1662489_1662672_1662760_1662836_1665056_1665139_1666072_1666178_1666421_1666601_1667334_1667401_1667961_1668194_1669000_1669166_1670663_1670810_1673880
H1_mix_00030644	chr16	+	905	4	FSM	ENSG00000206053.13	ENST00000569256.5	911	4	6	0	6	0	multi-exon	FALSE	canonical	3	43	junction_1	416.240582142374	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCGCTTCCATTCTGGAGA	7451	False	NA	NA	False	NA	NA	NA	1678261	1699428	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1678357_1691842_1691986_1697811_1697861_1698810
H1_mix_00030645	chr16	+	1082	4	FSM	ENSG00000206053.13	ENST00000561516.5	1065	4	-17	0	6	0	multi-exon	FALSE	canonical	3	60	junction_2	431.008893953091	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTGCCCTGACCCTCT	7451	False	NA	44	True	NA	NA	NA	1678261	1699599	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1678357_1685438_1685588_1697811_1697861_1698810
H1_mix_00030646	chr16	+	3200	6	FSM	ENSG00000206053.13	ENST00000562684.5	3185	6	-15	0	6	0	multi-exon	TRUE	canonical	3	48	junction_1	435.157167009806	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGCCTTGTTTTGTTTTG	7451	False	NA	88	True	NA	NA	NA	1678261	1701490	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1678357_1683508_1683593_1685438_1685588_1691842_1691986_1697811_1697861_1698810
H1_mix_00030647	chr16	+	3712	5	FSM	ENSG00000206053.13	ENST00000248098.8	3695	5	-17	0	6	0	multi-exon	FALSE	canonical	3	895	junction_4	50.4430371805664	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTAGCTATTTTCATAT	7451	False	NA	25	True	AATAAA	-32	NA	1678261	1702086	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1678357_1685438_1685588_1691842_1691986_1697811_1697861_1698810
H1_mix_00030648	chr16	+	2191	1	FSM	ENSG00000278987.1	ENST00000624137.1	2182	1	-9	0	-9	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATCAATTTACAAAATGTA	7983	False	NA	NA	False	AATAAA	-18	NA	1688345	1690536	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1688300_1690500
H1_mix_00030649	chr16	+	1232	4	ISM	ENSG00000138834.15	ENST00000564098.5	4436	5	-69	17029	6	462	5prime_fragment	FALSE	canonical	3	113	junction_3	4.02768199119819	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CTACAAAAAAAAAAAAAAAA	-29	True	NA	NA	False	NA	NA	NA	1706171	1730040	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_1706658_1724556_1724678_1729137_1729209_1729486
H1_mix_00030653	chr16	+	5709	32	FSM	ENSG00000138834.15	ENST00000610761.2	5686	32	-23	0	6	0	multi-exon	TRUE	canonical	1	1	junction_9	43.2440741370522	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGAGGACTTTATTATAAAAA	-29	True	NA	51	True	NA	NA	NA	1706171	1770351	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1706658_1724556_1724678_1729137_1729209_1729486_1729579_1743331_1743477_1747028_1747276_1748243_1748347_1748601_1748721_1758147_1758160_1758977_1758996_1759957_1760016_1760379_1760533_1761223_1761306_1762350_1762482_1762674_1762732_1762835_1763007_1763656_1763784_1764114_1764211_1764300_1764460_1765012_1765179_1765959_1766143_1766219_1766410_1766528_1766649_1766722_1766804_1766903_1766972_1767148_1767298_1767563_1767736_1767804_1767919_1768068_1768108_1768198_1768379_1768476_1768627_1768702
H1_mix_00030654	chr16	+	4436	5	FSM	ENSG00000138834.15	ENST00000564098.5	4436	5	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_4	25.4987744803549	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCGCCACACCCAGCACCA	40	False	NA	NA	False	NA	NA	NA	1706240	1747069	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1706658_1724556_1724678_1729137_1729209_1729486_1729579_1743334
H1_mix_00030660	chr16	+	3664	15	ISM	ENSG00000138834.15	ENST00000250894.8	5661	32	57748	2	9	-2	3prime_fragment	FALSE	canonical	2	85	junction_9	18.8361625711864	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTGCCTGTTCCTGGGCC	200	False	NA	15	True	AATAAA	-14	NA	1763930	1770315	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_1764211_1764300_1764460_1765012_1765179_1765959_1766143_1766219_1766410_1766528_1766649_1766722_1766804_1766903_1766972_1767148_1767298_1767563_1767736_1767804_1767919_1768068_1768108_1768198_1768379_1768476_1768627_1768702
H1_mix_00030661	chr16	+	6654	7	FSM	ENSG00000197774.14	ENST00000570069.5	5613	7	-173	-868	-173	-207	multi-exon	FALSE	canonical	3	10	junction_1	9.95685135416256	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAGAAGAAAACACAGGCTC	315	False	NA	NA	False	NA	NA	NA	1773152	1781495	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1773475_1773704_1773842_1774259_1774353_1775040_1775409_1775568_1775685_1775796_1775987_1776067
H1_mix_00030662	chr16	+	1191	6	FSM	ENSG00000095906.17	ENST00000568834.5	1173	6	-18	0	-18	0	multi-exon	FALSE	canonical	3	267	junction_2	168.872259415216	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGATCTGATGTTTCTAGA	NA	False	NA	13	True	ATTAAA	-20	NA	1782913	1789181	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1783037_1786536_1786656_1787676_1787832_1787940_1788052_1788137_1788208_1788568
H1_mix_00030663	chr16	+	1353	7	FSM	ENSG00000095906.17	ENST00000262302.14	1349	7	-4	0	0	0	multi-exon	FALSE	canonical	3	410	junction_3	113.831259131908	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATGTTTCTAGAGTCTT	-9	True	NA	18	True	ATTAAA	-25	NA	1782955	1789186	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1783037_1786536_1786656_1786756_1786956_1787676_1787832_1787940_1788052_1788137_1788208_1788568
H1_mix_00030665	chr16	+	2056	1	FSM	ENSG00000180185.12	ENST00000427358.4	1974	1	-84	2	-84	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTACAAGGGTAATTTTT	NA	False	NA	25	True	AATAAA	-18	NA	1826856	1828912	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1826900_1828900
H1_mix_00030666	chr16	+	696	4	FSM	ENSG00000140990.15	ENST00000268668.11	675	4	-21	0	-21	0	multi-exon	FALSE	canonical	3	2364	junction_3	225.700391374642	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTCTGGTGTGATC	-25	True	NA	26	True	TATAAA	-14	NA	1959516	1961975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1959755_1961152_1961292_1961496_1961637_1961796
H1_mix_00030667	chr16	+	671	4	FSM	ENSG00000140990.15	ENST00000570172.1	495	4	-41	-135	-21	0	multi-exon	FALSE	canonical	3	44	junction_3	1311.01597583282	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTCTGGTGTGATC	-25	True	NA	26	True	TATAAA	-14	NA	1959516	1961975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1959755_1961152_1961292_1961496_1961612_1961796
H1_mix_00030668	chr16	+	835	3	FSM	ENSG00000140990.15	ENST00000543683.6	830	3	-5	0	0	0	multi-exon	FALSE	canonical	3	2740	junction_1	81.5	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTCTGGTGTGATC	-4	True	NA	26	True	TATAAA	-14	NA	1959537	1961975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1959755_1961152_1961292_1961496
H1_mix_00030669	chr16	+	642	4	FSM	ENSG00000140990.15	ENST00000569148.1	628	4	-14	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	1195.47823996182	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTCTGGTGTGATC	-4	True	NA	26	True	TATAAA	-14	NA	1959537	1961975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1959755_1961152_1961259_1961496_1961637_1961796
H1_mix_00030670	chr16	+	381	2	FSM	ENSG00000255198.5	ENST00000531523.2	335	2	-51	5	-51	0	multi-exon	FALSE	canonical	3	570	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTGCATGCGGGTGTTC	2407	False	NA	15	True	AATAAA	-15	NA	1964847	1965504	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1965130_1965405
H1_mix_00030671	chr16	+	471	1	FSM	ENSG00000255198.5	ENST00000564014.1	471	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTGCATGCGGGTGTTC	13	True	NA	15	True	AATAAA	-15	NA	1965033	1965504	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1965000_1965500
H1_mix_00030672	chr16	+	7081	21	FSM	ENSG00000183751.16	ENST00000569628.5	2594	21	-117	-4370	-84	125	multi-exon	FALSE	canonical	3	482	junction_9	34.6128227684481	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGCTGCCGACCAAGTCT	5129	False	NA	NA	False	AATAAA	-12	NA	1971968	1983054	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1972206_1974055_1974293_1974375_1974424_1974537_1974680_1974762_1974848_1974927_1975099_1975186_1975263_1975344_1975439_1975528_1975711_1975807_1975950_1976055_1976115_1976210_1976315_1976813_1976962_1977053_1977285_1977355_1977427_1977513_1977671_1977741_1977801_1977957_1978062_1978148_1978221_1978312_1978472_1978551
H1_mix_00030674	chr16	+	6783	22	FSM	ENSG00000183751.16	ENST00000568546.6	6783	22	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_10	35.9624394633372	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATCCACTCCCCATATGA	-21	True	NA	NA	False	NA	NA	NA	1972052	1982929	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1972206_1974055_1974108_1974196_1974293_1974375_1974424_1974537_1974680_1974762_1974848_1974927_1975099_1975186_1975263_1975344_1975439_1975528_1975711_1975807_1975950_1976055_1976115_1976210_1976315_1976813_1976962_1977053_1977285_1977355_1977427_1977513_1977671_1977741_1977801_1977957_1978062_1978148_1978221_1978312_1978472_1978551
H1_mix_00030675	chr16	+	2759	2	FSM	ENSG00000127554.13	ENST00000565658.1	1365	2	-263	-1131	-124	0	multi-exon	FALSE	canonical	3	361	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTTTCTTTTTGTTGT	365	False	NA	10	True	AATAAA	-20	NA	1984068	1987749	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1984944_1985865
H1_mix_00030676	chr16	+	2365	3	FSM	ENSG00000127554.13	ENST00000248114.7	2365	3	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_1	13	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTTTCTTTTTGTTGT	-10	True	NA	10	True	AATAAA	-20	NA	1984192	1987749	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1984477_1984746_1984944_1985865
H1_mix_00030677	chr16	+	2047	4	FSM	ENSG00000127561.16	ENST00000248121.7	2026	4	-21	0	-21	0	multi-exon	TRUE	canonical	3	135	junction_2	134.120178281354	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGACGCTCCTGGAATCA	5229	False	NA	36	True	AATAAA	-24	NA	1989948	1994275	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1990202_1991973_1992212_1992635_1992779_1992862
H1_mix_00030680	chr16	+	752	2	FSM	ENSG00000127561.16	ENST00000564642.1	752	2	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCACTGCCCAGGACGTG	1071	False	NA	NA	False	NA	NA	NA	1992462	1993298	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1992779_1992862
H1_mix_00030681	chr16	+	751	2	FSM	ENSG00000183971.10	ENST00000566435.4	751	2	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	0	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTCGTCTGCTTGTGTA	-2	True	NA	31	True	AATAAA	-32	NA	2019784	2020755	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2020313_2020532
H1_mix_00030682	chr16	+	2160	7	FSM	ENSG00000065054.14	ENST00000424542.7	2160	7	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_6	13.0820063021269	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACACGCCTCTGTCTTTT	7	True	NA	NA	False	GATAAA	-17	NA	2026901	2039026	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2027219_2029581_2029783_2036323_2036504_2036727_2036882_2036954_2036999_2037537_2037601_2037825
H1_mix_00030683	chr16	+	1564	7	FSM	ENSG00000065054.14	ENST00000432365.6	1564	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_6	47.5070170255581	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCCGCCCCCTCCCCTCA	33	False	NA	13	True	AATAAA	-27	NA	2026927	2038489	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2027219_2029581_2029783_2036323_2036504_2036727_2036882_2036954_2036999_2037537_2037601_2037858
H1_mix_00030685	chr16	+	5526	41	FSM	ENSG00000103197.18	ENST00000642936.1	5507	41	-19	0	0	0	multi-exon	FALSE	canonical	2	2	junction_30	66.176426127436	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGCTCTTTTATTGACTT	553	False	NA	45	True	AATAAA	-45	NA	2047966	2088716	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2048066_2048586_2048754_2050399_2050487_2053341_2053453_2054295_2054441_2055401_2055520_2056195_2056245_2056643_2056770_2057104_2057179_2058746_2058874_2060669_2060814_2061870_2062009_2062496_2062601_2062971_2063054_2064271_2064428_2065518_2065636_2070455_2070579_2071509_2071617_2071783_2071935_2072240_2072364_2072848_2072984_2074199_2074390_2075798_2075893_2076067_2076171_2076490_2076586_2079034_2079197_2079275_2079429_2079556_2079670_2080164_2080378_2081594_2081799_2082435_2082505_2083694_2083817_2084227_2084716_2084950_2085027_2085229_2085323_2086192_2086380_2086731_2086872_2087862_2087942_2088047_2088140_2088226_2088326_2088445
H1_mix_00030686	chr16	+	6239	40	FSM	ENSG00000103197.18	ENST00000401874.7	5437	40	-76	-726	-54	0	multi-exon	FALSE	canonical	3	81	junction_25	52.756421160855	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCTGAGGACTCGGGGAA	499	False	NA	NA	False	NA	NA	NA	2047912	2089444	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2048066_2048586_2048754_2050399_2050487_2053341_2053453_2054295_2054441_2055401_2055520_2056195_2056245_2056643_2056770_2057104_2057179_2058746_2058874_2060669_2060814_2061870_2062009_2062496_2062601_2062971_2063054_2064271_2064428_2065518_2065636_2070455_2070579_2071509_2071617_2071783_2071935_2072240_2072364_2072848_2072984_2074199_2074390_2075798_2075893_2076067_2076171_2076490_2076586_2079034_2079197_2079275_2079429_2079556_2079670_2080164_2080378_2081594_2081799_2083694_2083817_2084227_2084716_2084950_2085027_2085229_2085323_2086192_2086380_2086731_2086872_2087862_2087942_2088047_2088140_2088226_2088326_2088445
H1_mix_00030687	chr16	+	6433	42	FSM	ENSG00000103197.18	ENST00000219476.9	6415	42	-18	0	0	0	multi-exon	FALSE	canonical	2	2	junction_31	70.4976868758707	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTCCAATACTGCTGTGTC	553	False	NA	NA	False	AATAAA	-23	NA	2047966	2089491	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2048066_2048586_2048754_2050399_2050487_2053341_2053453_2054295_2054441_2055401_2055520_2056195_2056245_2056643_2056770_2057104_2057179_2058746_2058874_2060669_2060814_2061870_2062009_2062496_2062601_2062971_2063054_2064271_2064428_2065518_2065636_2070455_2070579_2071509_2071617_2071783_2071935_2072240_2072364_2072848_2072984_2074199_2074390_2075798_2075893_2076067_2076171_2076490_2076586_2077597_2077727_2079031_2079197_2079275_2079429_2079556_2079670_2080164_2080378_2081594_2081799_2082435_2082505_2083694_2083817_2084227_2084716_2084950_2085027_2085229_2085323_2086192_2086380_2086731_2086872_2087862_2087942_2088047_2088140_2088226_2088326_2088445
H1_mix_00030688	chr16	+	5293	39	FSM	ENSG00000103197.18	ENST00000439673.6	5287	39	-6	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	62.6943736513463	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGATTGCAGTCAGACAG	-9	True	NA	30	True	AATAAA	-34	NA	2048007	2088701	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2048066_2048586_2048754_2050399_2050487_2054295_2054441_2055401_2055520_2056195_2056245_2056643_2056770_2057104_2057179_2058746_2058874_2060669_2060814_2061870_2062009_2062496_2062601_2062971_2063054_2064271_2064428_2065518_2065636_2070455_2070579_2071509_2071617_2071783_2071935_2072240_2072364_2072848_2072984_2074199_2074390_2075798_2075893_2076067_2076171_2076490_2076586_2079031_2079197_2079275_2079429_2079556_2079670_2080164_2080378_2081594_2081799_2083694_2083817_2084227_2084716_2084950_2085027_2085229_2085323_2086192_2086380_2086731_2086872_2087862_2087942_2088047_2088140_2088226_2088326_2088445
H1_mix_00030689	chr16	+	5628	41	FSM	ENSG00000103197.18	ENST00000350773.9	5538	41	-107	17	-54	0	multi-exon	FALSE	canonical	3	42	junction_25	59.240948675726	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGATTGCAGTCAGACAG	499	False	NA	30	True	AATAAA	-34	NA	2047912	2088701	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2048066_2048586_2048754_2050399_2050487_2053341_2053453_2054295_2054441_2055401_2055520_2056195_2056245_2056643_2056770_2057104_2057179_2058746_2058874_2060669_2060814_2061870_2062009_2062496_2062601_2062971_2063054_2064271_2064428_2065518_2065636_2070455_2070579_2071509_2071617_2071783_2071935_2072240_2072364_2072848_2072984_2074199_2074390_2075798_2075893_2076067_2076171_2076490_2076586_2077597_2077727_2079031_2079197_2079275_2079429_2079556_2079670_2080164_2080378_2081594_2081799_2083694_2083817_2084227_2084716_2084950_2085027_2085229_2085323_2086192_2086380_2086731_2086872_2087862_2087942_2088047_2088140_2088226_2088326_2088445
H1_mix_00030690	chr16	+	5435	40	FSM	ENSG00000103197.18	ENST00000642797.1	5388	40	-74	27	0	0	multi-exon	FALSE	canonical	3	43	junction_25	55.0987637543564	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATAGAGGCACAGATTGC	553	False	NA	20	True	AATAAA	-24	NA	2047966	2088691	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2048066_2048586_2048754_2050399_2050487_2053341_2053453_2054295_2054441_2055401_2055520_2056195_2056245_2056643_2056770_2057104_2057179_2058746_2058874_2060669_2060814_2061870_2062009_2062496_2062601_2062971_2063054_2064271_2064428_2065518_2065636_2070455_2070579_2071509_2071617_2071783_2071935_2072240_2072364_2072848_2072984_2074199_2074390_2075798_2075893_2076067_2076171_2076490_2076586_2079031_2079197_2079275_2079429_2079556_2079670_2080164_2080378_2081594_2081799_2083694_2083817_2084227_2084716_2084950_2085027_2085229_2085323_2086192_2086380_2086731_2086872_2087862_2087942_2088047_2088140_2088226_2088326_2088445
H1_mix_00030691	chr16	+	5445	40	FSM	ENSG00000103197.18	ENST00000644399.1	5445	40	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_25	60.265629409307	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCAGACAGCTCTTTTAT	606	False	NA	39	True	AATAAA	-43	NA	2048622	2088710	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2048754_2050399_2050487_2053341_2053453_2054295_2054441_2055401_2055520_2056195_2056245_2056643_2056770_2057104_2057179_2058746_2058874_2060669_2060814_2061870_2062009_2062496_2062601_2062971_2063054_2064271_2064428_2065518_2065636_2070455_2070579_2071509_2071617_2071783_2071935_2072240_2072364_2072848_2072984_2074199_2074390_2075798_2075893_2076067_2076171_2076490_2076586_2077597_2077727_2079034_2079197_2079275_2079429_2079556_2079670_2080164_2080378_2081594_2081799_2083694_2083817_2084227_2084716_2084950_2085027_2085229_2085323_2086192_2086380_2086731_2086872_2087862_2087942_2088047_2088140_2088226_2088326_2088445
H1_mix_00030695	chr16	+	3388	10	FSM	ENSG00000103197.18	ENST00000569930.2	3388	10	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	47.0542109213628	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATAGAGGCACAGATTGCA	3008	False	NA	21	True	AATAAA	-25	NA	2081929	2088692	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2083817_2084227_2084716_2084950_2085027_2085229_2085323_2086192_2086380_2086731_2086872_2087862_2087942_2088047_2088140_2088226_2088326_2088445
H1_mix_00030698	chr16	+	1743	8	FSM	ENSG00000167964.13	ENST00000562735.5	1720	8	-23	0	-23	0	multi-exon	TRUE	canonical	3	22	junction_6	5.95219047314276	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCTAGTGAATAAAGTTGT	NA	False	NA	-20	True	NA	NA	NA	2148600	2154110	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2148979_2149940_2150052_2151568_2151611_2151694_2151762_2151855_2151909_2152819_2152886_2152988_2153223_2153318
H1_mix_00030699	chr16	+	1698	9	FSM	ENSG00000167964.13	ENST00000210187.11	1674	9	-24	0	-23	0	multi-exon	FALSE	canonical	3	14	junction_7	8.64580823289529	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCACTTCTAGAGCAGGAT	NA	False	NA	35	True	AATAAA	-41	NA	2148600	2154165	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2148979_2149940_2150052_2151568_2151611_2151694_2151762_2151855_2151909_2152819_2152886_2152988_2153046_2153145_2153223_2153318
H1_mix_00030700	chr16	+	699	6	FSM	ENSG00000167964.13	ENST00000561600.5	699	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	6.11228271597445	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTCGAGGGGCCTCCTGC	1317	False	NA	NA	False	NA	NA	NA	2149981	2153389	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2150052_2151568_2151611_2151694_2151762_2151855_2151909_2152819_2152886_2152988
H1_mix_00030701	chr16	+	799	4	FSM	ENSG00000131653.13	ENST00000565383.5	799	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	514.839349268833	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTGCTGGGTAGGGAA	7033	False	NA	11	True	AATAAA	-21	NA	2155697	2168515	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2155859_2163882_2164002_2165856_2165937_2168076
H1_mix_00030702	chr16	+	3687	21	FSM	ENSG00000131653.13	ENST00000326181.11	3683	21	-4	0	0	0	multi-exon	TRUE	canonical	3	1002	junction_1	81.8256683443527	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTCTGGGGGTGCGGTGGG	-9	True	NA	10	True	AATAAA	-21	NA	2155777	2178129	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2155859_2163882_2164002_2165878_2165937_2168076_2168169_2170613_2170731_2171263_2171357_2171571_2171606_2172190_2172375_2172464_2172600_2173181_2173400_2173480_2173555_2173787_2173837_2173920_2174049_2174250_2174334_2175110_2175151_2175300_2175418_2175499_2175623_2175833_2175954_2176048_2176181_2176264_2176385_2176559
H1_mix_00030703	chr16	+	828	4	FSM	ENSG00000131653.13	ENST00000567653.5	666	4	-162	0	-56	0	multi-exon	FALSE	canonical	3	1002	junction_1	104.260357865405	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTTTGCTGCTGGGTA	6977	False	NA	6	True	AATAAA	-16	NA	2155641	2168510	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2155859_2163882_2164002_2165878_2165937_2168076
H1_mix_00030705	chr16	+	1866	9	FSM	ENSG00000167965.18	ENST00000564088.5	1861	9	-5	0	-5	0	multi-exon	FALSE	canonical	3	124	junction_1	171.797437044328	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTTGCTCGGGAAGCAG	NA	False	NA	15	True	AATAAA	-16	NA	2205171	2209396	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2205513_2206060_2206215_2206357_2206410_2206496_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
H1_mix_00030706	chr16	+	1870	9	FSM	ENSG00000167965.18	ENST00000382450.8	1861	9	-9	0	-9	0	multi-exon	FALSE	canonical	3	10	junction_2	222.317305612946	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTTGCTCGGGAAGCAG	NA	False	NA	15	True	AATAAA	-16	NA	2205194	2209396	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2205513_2206030_2206215_2206360_2206410_2206496_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
H1_mix_00030707	chr16	+	1785	9	FSM	ENSG00000167965.18	ENST00000569417.6	1671	9	-197	83	0	0	multi-exon	FALSE	canonical	3	218	junction_1	142.176771573278	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGTAATAAAAGCAGACCG	33	False	NA	-11	True	GGGGCT	-9	NA	2205256	2209370	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2205513_2206030_2206215_2206357_2206410_2206496_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
H1_mix_00030709	chr16	+	2137	8	FSM	ENSG00000167965.18	ENST00000568194.5	2116	8	-21	0	0	0	multi-exon	FALSE	canonical	3	548	junction_5	50.6943622836597	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTGCTCGGGAAGCAGA	-19	True	NA	16	True	AATAAA	-17	NA	2205449	2209397	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2206215_2206357_2206410_2206496_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
H1_mix_00030712	chr16	+	1701	9	FSM	ENSG00000167965.18	ENST00000397124.5	1691	9	-10	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	135.959035650449	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTGCTCGGGAAGCAGA	-18	True	NA	16	True	AATAAA	-17	NA	2205730	2209397	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2205876_2206030_2206215_2206357_2206410_2206496_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
H1_mix_00030713	chr16	+	1588	9	FSM	ENSG00000167965.18	ENST00000565250.1	1588	9	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	180.396784893745	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGGGGCTCAGTCTGGGA	20	True	NA	-29	True	NA	NA	NA	2205768	2209352	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2205876_2206060_2206215_2206357_2206410_2206496_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
H1_mix_00030715	chr16	+	2563	14	NNC	ENSG00000167967.16	novel	2548	14	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_8	36.5134327231879	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTGATGTTGTGGCAG	-25	True	NA	14	True	AATAAA	-15	NA	2223571	2235741	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_2223771_2228371_2228524_2229569_2229676_2232170_2232365_2232455_2232577_2232755_2232909_2233010_2233184_2233437_2233648_2233884_2233991_2234170_2234389_2234582_2234782_2234858_2235002_2235080_2235144_2235215
H1_mix_00030716	chr16	+	2587	14	FSM	ENSG00000167967.16	ENST00000301727.9	2548	14	-40	1	-29	0	multi-exon	FALSE	canonical	3	99	junction_8	21.2947753127687	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTGATGTTGTGGCAG	8265	False	NA	14	True	AATAAA	-15	NA	2223550	2235741	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2223771_2228371_2228524_2229569_2229676_2232170_2232365_2232455_2232577_2232755_2232909_2233010_2233184_2233437_2233648_2233881_2233991_2234170_2234389_2234582_2234782_2234858_2235002_2235080_2235144_2235215
H1_mix_00030718	chr16	+	5931	5	FSM	ENSG00000167967.16	ENST00000569796.1	5931	5	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_2	8.4372685153431	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTGATGTTGTGGCAG	4695	False	NA	14	True	AATAAA	-15	NA	2228392	2235741	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2228524_2229569_2232365_2232455_2232577_2232755_2232909_2233010
H1_mix_00030720	chr16	+	543	2	FSM	ENSG00000260778.5	ENST00000563734.1	543	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTGTGACCTGGGGTTT	NA	False	NA	13	True	AATAAA	-13	NA	2268154	2273418	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2268266_2272986
H1_mix_00030721	chr16	+	649	2	ISM	ENSG00000260778.5	ENST00000562838.1	535	3	3012	-294	3012	0	3prime_fragment	FALSE	canonical	3	50	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTGTGACCTGGGGTTT	NA	False	NA	13	True	AATAAA	-13	NA	2271674	2273418	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_2271892_2272986
H1_mix_00030722	chr16	+	4195	16	FSM	ENSG00000162063.13	ENST00000293968.11	4173	16	-22	0	-22	0	multi-exon	FALSE	canonical	3	32	junction_2	125.558308721044	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGATGAGTGATGGACGTC	63	False	NA	26	True	ATTAAA	-17	NA	2429371	2458851	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2429498_2431129_2431285_2435805_2435874_2437128_2437323_2438069_2438124_2439352_2439458_2439748_2439827_2443648_2443801_2445457_2445623_2448854_2448979_2449281_2449463_2449827_2449916_2453209_2453310_2453409_2453538_2455394_2455565_2456544
H1_mix_00030723	chr16	+	4230	17	FSM	ENSG00000162063.13	ENST00000397066.9	4230	17	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_1	54.0014105718545	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGTGATGGACGTCCTT	-2	True	NA	29	True	ATTAAA	-20	NA	2429446	2458854	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2429498_2431129_2431285_2432960_2433068_2435805_2435874_2437128_2437323_2438069_2438124_2439352_2439458_2439748_2439827_2443648_2443801_2445457_2445623_2448854_2448979_2449281_2449463_2449827_2449916_2453209_2453310_2453409_2453538_2455394_2455565_2456544
H1_mix_00030724	chr16	+	234	1	FSM	ENSG00000162063.13	ENST00000564333.1	1937	1	1103	600	1103	-600	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCTGGGCGAGGGGCA	7640	False	NA	NA	False	NA	NA	NA	2437088	2437322	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2437100_2437300
H1_mix_00030725	chr16	+	916	7	FSM	ENSG00000162062.15	ENST00000567489.5	907	7	-9	0	-1	0	multi-exon	FALSE	canonical	3	34	junction_1	82.7279678625473	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGTGCAGGTGAGACCCCG	1812	False	NA	NA	False	GGGGCT	-42	NA	2460084	2462723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2460171_2460622_2460694_2460815_2461225_2461746_2461801_2462148_2462240_2462414_2462527_2462630
H1_mix_00030726	chr16	+	1657	10	FSM	ENSG00000162062.15	ENST00000361837.9	1633	10	-24	0	-1	0	multi-exon	FALSE	canonical	3	114	junction_1	45.8583433447065	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTATTTATGTTTT	1812	False	NA	17	True	ATTAAA	-17	NA	2460084	2464963	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2460171_2460282_2460382_2460622_2460694_2460815_2461225_2461746_2461801_2462148_2462240_2462414_2462527_2462630_2462733_2464038_2464230_2464521
H1_mix_00030727	chr16	+	1912	9	FSM	ENSG00000162062.15	ENST00000569496.5	1911	9	-1	0	-1	0	multi-exon	FALSE	canonical	3	114	junction_1	48.4613247858537	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCGCTTGTGTGATATTAA	1812	False	NA	-20	True	NA	NA	NA	2460084	2464926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2460171_2460282_2460382_2460622_2460694_2460815_2461225_2461746_2461801_2462148_2462240_2462414_2462527_2462630_2462733_2464038
H1_mix_00030730	chr16	+	1709	9	FSM	ENSG00000162062.15	ENST00000483320.5	1709	9	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_1	21.6791230219306	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTATTTATGTTTT	22	True	NA	17	True	ATTAAA	-17	NA	2460144	2464963	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2460382_2460622_2460694_2460815_2461225_2461746_2461801_2462148_2462240_2462414_2462527_2462630_2462733_2464038_2464230_2464521
H1_mix_00030732	chr16	+	6593	7	FSM	ENSG00000162065.14	ENST00000567020.6	6673	7	80	0	4	0	multi-exon	FALSE	canonical	3	24	junction_6	3.87298334620742	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACTGTGAAATAACTTGC	-1	True	NA	21	True	AATAAA	-22	NA	2475130	2505734	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2475171_2496033_2497114_2498237_2498397_2499356_2499421_2499834_2499931_2500267_2500491_2500803
H1_mix_00030733	chr16	+	1942	3	FSM	ENSG00000260272.1	ENST00000564543.1	1944	3	2	0	2	0	multi-exon	FALSE	canonical	1	6	junction_1	798	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGCCTGTGTCTGCTCAGC	1	False	NA	26	True	AATAAA	-15	NA	2496033	2520218	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2497114_2519217_2519402_2519540
H1_mix_00030734	chr16	+	1093	3	FSM	ENSG00000185883.12	ENST00000330398.9	1093	3	0	0	0	0	multi-exon	FALSE	canonical	3	1558	junction_1	22	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGCCTGTGTCTGCTCAGC	-10	True	NA	26	True	AATAAA	-15	NA	2513951	2520218	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2514183_2519217_2519402_2519540
H1_mix_00030735	chr16	+	3962	2	FSM	ENSG00000185883.12_ENSG00000279520.1	ENST00000564973.1	1081	2	-2877	-4	-536	4	multi-exon	FALSE	canonical	3	1602	junction_1	0	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTCTGCTCAGCTTGT	0	True	NA	30	True	AATAAA	-19	NA	2516121	2520222	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2519402_2519540
H1_mix_00030736	chr16	+	1342	1	FSM	ENSG00000279520.1	ENST00000624099.1	1342	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGATCCGCCCGCCTTGG	536	False	NA	NA	False	NA	NA	NA	2516657	2517999	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2516700_2518000
H1_mix_00030737	chr16	+	3194	11	FSM	ENSG00000162066.16	ENST00000293971.11	3172	11	-22	0	-8	0	multi-exon	TRUE	canonical	3	126	junction_8	32.251511592482	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGCAGTTCTGTGACAT	-32	True	NA	27	True	AATACA	-22	NA	2520348	2531417	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2520542_2520768_2520906_2520983_2521124_2527560_2527616_2527772_2527986_2528059_2528149_2528235_2528381_2528451_2528560_2528649_2528719_2528993_2529096_2529474
H1_mix_00030738	chr16	+	3289	10	FSM	ENSG00000162066.16	ENST00000302956.8	3273	10	-16	0	-8	0	multi-exon	FALSE	canonical	3	160	junction_8	25.5579709003514	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTTCTGTGACATGAAGT	-32	True	NA	32	True	AATACA	-27	NA	2520348	2531422	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2520542_2520768_2520906_2520983_2521124_2527560_2527616_2527772_2527986_2528059_2528149_2528235_2528381_2528451_2528719_2528993_2529096_2529474
H1_mix_00030740	chr16	+	2897	10	FSM	ENSG00000162066.16	ENST00000648227.1	2890	10	-7	0	0	0	multi-exon	FALSE	canonical	3	17	junction_8	62.0089599260551	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGATGGTTGGTCCACA	9	True	NA	NA	False	GGGGCT	-2	NA	2520389	2531230	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2520542_2520768_2520906_2520983_2521124_2527560_2527616_2527772_2527986_2528059_2528149_2528235_2528381_2528451_2528560_2528993_2529096_2529474
H1_mix_00030743	chr16	+	7202	14	FSM	ENSG00000140992.19	ENST00000342085.9	7184	14	-18	0	0	0	multi-exon	FALSE	canonical	3	38	junction_11	9.79493891774557	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTTTGCTGGCGTGGCTC	-2	True	NA	15	True	AATAAA	-17	NA	2538002	2603188	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2538137_2557702_2557964_2561479_2561523_2561770_2561909_2565552_2565698_2566355_2566454_2577424_2577501_2581294_2581364_2581606_2581704_2583411_2583586_2586675_2586894_2595792_2595851_2597122_2597276_2597650
H1_mix_00030744	chr16	+	1049	7	NIC	ENSG00000140992.19	novel	1729	12	NA	NA	18	-2	combination_of_known_junctions	FALSE	canonical	3	6	junction_6	22.8722296440222	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTTTGGGTTGACTCGT	18	False	NA	NA	False	ATTAAA	-18	NA	2538038	2571339	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_2538137_2557702_2557964_2561479_2561523_2561770_2561909_2565552_2565698_2566355_2566454_2571073
H1_mix_00030747	chr16	+	2668	4	FSM	ENSG00000215154.6	ENST00000399702.5	2748	4	80	0	10	0	multi-exon	FALSE	canonical	3	50	junction_1	7.31816613336672	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAGAAAATAAGTTACTA	16	False	NA	NA	False	AATAAA	-23	NA	2603429	2630494	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2603728_2610461_2611053_2613959_2614069_2628824
H1_mix_00030748	chr16	+	2450	6	FSM	ENSG00000167977.9	ENST00000301738.9	2434	6	-16	0	-16	0	multi-exon	FALSE	canonical	3	334	junction_2	30.6698549067321	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGCGTAGTAGCTGTTTAT	NA	False	NA	16	True	AATAAA	-17	NA	2682506	2709030	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2682801_2695934_2696044_2697905_2697998_2699820_2699917_2702352_2702479_2707297
H1_mix_00030751	chr16	+	9056	15	FSM	ENSG00000167978.17	ENST00000301740.13	9044	15	-12	0	0	0	multi-exon	TRUE	canonical	3	145	junction_12	638.187580382995	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGTCTGTAGACTGTTTA	-46	True	NA	18	True	AATAAA	-18	NA	2752625	2771412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2752847_2756333_2756607_2757471_2757580_2757780_2757946_2758469_2758548_2758984_2759048_2759139_2759173_2759351_2759403_2759568_2759662_2760300_2760500_2761560_2768262_2768996_2769285_2770351_2770466_2770603_2770718_2770857
H1_mix_00030762	chr16	+	8231	7	NIC	ENSG00000167978.17	novel	459	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	145	junction_4	567.813349614114	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGGTCTGTAGACTGTT	167	False	NA	16	True	AATAAA	-16	NA	2759746	2771410	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_2760009_2760300_2760500_2761560_2768262_2768996_2769285_2770351_2770466_2770603_2770718_2770857
H1_mix_00030765	chr16	+	378	1	NIC	ENSG00000167978.17	novel	887	3	NA	NA	-4	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCCAGGCCAAGGAAGGTA	328	False	NA	NA	False	NA	NA	NA	2768546	2768924	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_2768500_2768900
H1_mix_00030766	chr16	+	1759	3	FSM	ENSG00000167978.17	ENST00000574331.5	1759	3	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_1	6.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGGTCTGTAGACTGTT	307	False	NA	16	True	AATAAA	-16	NA	2769373	2771410	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2770466_2770603_2770718_2770857
H1_mix_00030768	chr16	+	3259	1	FSM	ENSG00000276791.1	ENST00000621230.1	3250	1	-9	0	-9	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGAGTTCTGTGCATCG	5326	False	NA	6	True	AATAAA	-15	NA	2777309	2780568	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2777300_2780600
H1_mix_00030769	chr16	+	1033	4	FSM	ENSG00000162076.13	ENST00000396958.8	990	4	-43	0	-41	0	multi-exon	FALSE	canonical	3	184	junction_1	31.3793987620328	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCAGGTTTTAAACATCC	5	True	NA	12	True	AATAAA	-26	NA	2883171	2899365	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2883367_2895219_2895321_2896351_2896772_2899048
H1_mix_00030770	chr16	+	5057	10	FSM	ENSG00000059122.17	ENST00000253928.14	5043	10	-14	0	-14	0	multi-exon	FALSE	canonical	3	98	junction_3	14.0694924316391	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACTAAGAACTCTAAGTT	-13	True	NA	NA	False	AATAAA	-23	NA	2911916	2951208	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2912155_2914175_2914290_2929612_2930011_2930409_2930881_2933129_2933583_2933715_2933980_2937120_2937385_2938183_2938457_2940031_2940093_2948687
H1_mix_00030771	chr16	+	4963	10	FSM	ENSG00000059122.17	ENST00000416288.6	4963	10	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	24.0744729311688	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAACGTATCAACTAAGAA	-12	True	NA	NA	False	AATAAA	-14	NA	2911998	2951199	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2912155_2914175_2914290_2929612_2930011_2930412_2930881_2933129_2933583_2933715_2933980_2937120_2937385_2938183_2938457_2940031_2940093_2948687
H1_mix_00030772	chr16	+	2896	7	FSM	ENSG00000131650.14	ENST00000572045.5	2339	7	-557	0	-557	0	multi-exon	FALSE	canonical	3	38	junction_4	14.6562462982701	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCCTCGAAAGTTCTTCC	31	False	NA	8	True	AATAAA	-16	NA	2963658	2968380	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2964615_2964858_2965034_2966139_2966232_2966324_2966450_2966641_2966796_2966909_2967243_2967319
H1_mix_00030773	chr16	+	1995	9	FSM	ENSG00000131650.14	ENST00000303746.10	1995	9	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	14.1840579525043	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCCTCGAAAGTTCTTCC	-1	True	NA	8	True	AATAAA	-16	NA	2964274	2968380	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2964615_2964858_2965034_2966139_2966232_2966324_2966450_2966641_2966796_2966909_2967243_2967319_2967446_2967525_2967605_2967809
H1_mix_00030774	chr16	+	1882	8	FSM	ENSG00000131650.14	ENST00000319500.10	1882	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	20.7423455269452	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCGAAAGTTCTTCCGTG	36	False	NA	11	True	AATAAA	-19	NA	2964311	2968383	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2964615_2964858_2965034_2966139_2966232_2966324_2966450_2966641_2966796_2966909_2967243_2967319_2967446_2967809
H1_mix_00030775	chr16	+	1922	8	FSM	ENSG00000131650.14	ENST00000575769.1	1922	8	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	14.1868004187854	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAGATTTTGAATAAAGGA	245	False	NA	-24	True	AAAACA	-14	NA	2964520	2968348	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2964615_2964858_2965034_2966139_2966232_2966324_2966450_2966641_2966796_2966909_2967243_2967319_2967446_2967525
H1_mix_00030776	chr16	+	2751	3	FSM	ENSG00000162073.14	ENST00000293978.12	2644	3	-107	0	-107	0	multi-exon	FALSE	canonical	3	8	junction_1	76	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTTCTGGAACTTCTT	4887	False	NA	9	True	AATAAA	-15	NA	2969162	2973482	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2969841_2971273_2971379_2971514
H1_mix_00030777	chr16	+	2692	3	FSM	ENSG00000162073.14	ENST00000318782.9	2685	3	-7	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	19	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTCTGGAACTTCTTGT	9	True	NA	11	True	AATAAA	-17	NA	2969340	2973484	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2969841_2971156_2971379_2971514
H1_mix_00030778	chr16	+	1836	2	Fusion	ENSG00000289281.1_ENSG00000272079.2	novel	727	2	NA	NA	81	0	intron_retention	FALSE	canonical	3	19	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGTCTGCCCAGGTGTA	-4	True	NA	6	True	AATAAA	-20	NA	3004212	3007388	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr16_+_3004880_3006219
H1_mix_00030779	chr16	+	986	4	FSM	ENSG00000006327.14	ENST00000326577.9	977	4	-9	0	0	0	multi-exon	FALSE	canonical	3	1214	junction_1	133.479087001173	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTGGAGAGGCAGTGAT	-10	True	NA	23	True	AATAAA	-19	NA	3020358	3022383	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3020492_3021214_3021320_3021554_3021690_3021770
H1_mix_00030780	chr16	+	930	3	FSM	ENSG00000006327.14	ENST00000341627.5	881	3	-50	1	-50	-1	multi-exon	FALSE	canonical	3	85	junction_1	719.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTTTGGAGAGGCAGTGA	1909	False	NA	22	True	AATAAA	-18	NA	3020308	3022382	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3020492_3021554_3021690_3021770
H1_mix_00030781	chr16	+	1678	3	FSM	ENSG00000006327.14	ENST00000571351.1	1678	3	0	0	0	0	multi-exon	FALSE	canonical	3	1459	junction_1	32.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTGGAGAGGCAGTGAT	21	False	NA	23	True	AATAAA	-19	NA	3020389	3022383	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3021320_3021554_3021690_3021770
H1_mix_00030782	chr16	+	1147	2	FSM	ENSG00000131652.14	ENST00000574957.1	1143	2	-4	0	0	0	multi-exon	FALSE	canonical	3	902	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAATTCCCTCATCCTGGC	-9	True	NA	NA	False	NA	NA	NA	3024026	3026515	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3024366_3025707
H1_mix_00030783	chr16	+	960	7	FSM	ENSG00000131652.14	ENST00000576143.5	960	7	0	0	0	0	multi-exon	FALSE	canonical	3	766	junction_2	49.5392661319169	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCAGGTGGCTGGTTGG	-9	True	NA	NA	False	NA	NA	NA	3024026	3026781	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3024366_3025707_3025824_3025923_3026167_3026250_3026289_3026364_3026414_3026515_3026588_3026678
H1_mix_00030784	chr16	+	1419	13	FSM	ENSG00000131652.14	ENST00000326266.13	1411	13	-8	0	0	0	multi-exon	FALSE	canonical	3	766	junction_2	62.4386365428757	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCTCTTTCTTTCTATG	-9	True	NA	64	True	AATAAA	-17	NA	3024026	3027750	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3024366_3025707_3025824_3025923_3025989_3026062_3026167_3026250_3026289_3026364_3026414_3026515_3026588_3026678_3026782_3026866_3026917_3027010_3027074_3027169_3027281_3027365_3027501_3027576
H1_mix_00030786	chr16	+	3674	10	FSM	ENSG00000008516.18	ENST00000336577.9	3674	10	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	7.24185366080014	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTCCATTCTTCTGAGC	-1	True	NA	15	True	AATAAA	-17	NA	3046560	3060726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3047017_3047414_3047548_3050008_3050145_3050253_3050547_3057032_3057210_3057309_3057395_3057530_3057614_3058180_3058334_3058411_3058670_3058826
H1_mix_00030787	chr16	+	729	4	FSM	ENSG00000008516.18	ENST00000575441.1	710	4	-19	0	-19	0	multi-exon	FALSE	canonical	3	82	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACGGCCGAATCCTCCTC	5	False	NA	NA	False	GGGGCT	-45	NA	3056774	3058306	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3057210_3057309_3057395_3057530_3057614_3058180
H1_mix_00030788	chr16	+	990	7	FSM	ENSG00000008517.19	ENST00000325568.9	1105	7	0	115	0	0	multi-exon	FALSE	canonical	3	3	junction_1	6.44635986860457	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGGAGGTGGGTTTCCCAG	5675	False	NA	26	True	AATAAA	-39	NA	3065296	3069552	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3065495_3065783_3065827_3067376_3067416_3067553_3067614_3067983_3068011_3068179_3068240_3068989
H1_mix_00030789	chr16	+	947	7	FSM	ENSG00000008517.19	ENST00000525643.7	818	7	-129	0	-99	0	multi-exon	FALSE	canonical	3	6	junction_1	5.52016505389306	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCAGGGGAGATACCATG	64	False	NA	4	True	AATAAA	-17	NA	3065510	3069530	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3065688_3065783_3065827_3067376_3067416_3067553_3067614_3067983_3068011_3068179_3068240_3068989
H1_mix_00030790	chr16	+	1985	7	FSM	ENSG00000122386.11	ENST00000219091.9	1968	7	-17	0	9	0	multi-exon	FALSE	canonical	3	16	junction_1	19.3081732837562	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCCCGCCTACACAGCTTT	-9	True	NA	20	True	ATTAAA	-16	NA	3112568	3120517	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3112683_3113416_3113488_3115354_3115569_3115828_3115921_3116426_3116548_3118904_3119016_3119255
H1_mix_00030791	chr16	+	2070	7	FSM	ENSG00000122386.11	ENST00000382192.7	2062	7	-8	0	-8	0	multi-exon	FALSE	canonical	3	10	junction_1	21.0587801693788	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCCCGCCTACACAGCTTT	5785	False	NA	20	True	ATTAAA	-16	NA	3112551	3120517	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3112683_3113348_3113488_3115354_3115569_3115828_3115921_3116426_3116548_3118904_3119016_3119255
H1_mix_00030792	chr16	+	2241	2	ISM	ENSG00000122386.11	ENST00000219091.9	1968	7	5451	0	2516	0	3prime_fragment	FALSE	canonical	3	82	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCCCGCCTACACAGCTTT	5459	False	NA	20	True	ATTAAA	-16	NA	3118036	3120517	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_3119016_3119255
H1_mix_00030793	chr16	+	3302	6	FSM	ENSG00000085644.14	ENST00000396878.8	3311	6	9	0	9	0	multi-exon	FALSE	canonical	3	23	junction_2	3.8262252939418	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGGCTGTTCTGTTCT	4	True	NA	13	True	AATAAA	-13	NA	3135037	3142804	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3135388_3137165_3137680_3138417_3138542_3138744_3138819_3138974_3139099_3140688
H1_mix_00030794	chr16	+	2240	6	FSM	ENSG00000085644.14	ENST00000576416.5	2240	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	10.8921990433521	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCGTGGAGGACTGGCCTT	-16	True	NA	NA	False	NA	NA	NA	3135132	3141779	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3135446_3137165_3137680_3138417_3138542_3138744_3138819_3138974_3139099_3140688
H1_mix_00030795	chr16	+	3245	6	FSM	ENSG00000085644.14	ENST00000576863.1	3245	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	9.49947366963033	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGGCTGTTCTGTTCT	10	True	NA	13	True	AATAAA	-13	NA	3135158	3142804	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3135388_3137165_3137680_3138353_3138542_3138744_3138819_3138974_3139099_3140688
H1_mix_00030796	chr16	+	1314	1	FSM	ENSG00000279330.1	ENST00000622989.1	2199	1	1005	-120	1005	120	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGTTAAAGAAATCAGTAA	9907	False	NA	NA	False	NA	NA	NA	3274613	3275927	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3274600_3275900
H1_mix_00030797	chr16	+	3833	4	NIC	ENSG00000006194.10	novel	3282	6	NA	NA	-800	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	36.6696968444882	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGTGAGTCTTCAATGA	231	False	NA	NA	False	AATAAA	-20	NA	3282684	3291460	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_3284206_3286022_3286150_3288453_3288571_3289392
H1_mix_00030798	chr16	+	3891	6	FSM	ENSG00000006194.10	ENST00000219069.6	3282	6	-450	-159	-444	159	multi-exon	FALSE	canonical	3	40	junction_2	25.7371327074327	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCAGCCTCCAGGCTGGG	587	False	NA	NA	False	NA	NA	NA	3283040	3291619	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3284206_3285058_3285240_3285680_3285755_3286022_3286150_3288453_3288571_3289392
H1_mix_00030799	chr16	+	3392	2	FSM	ENSG00000006194.10	ENST00000574253.1	1139	2	-469	-1784	-444	159	multi-exon	FALSE	canonical	3	31	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCAGCCTCCAGGCTGGG	587	False	NA	NA	False	NA	NA	NA	3283040	3291619	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3284206_3289392
H1_mix_00030800	chr16	+	3706	3	FSM	ENSG00000006194.10	ENST00000575823.1	851	3	-1270	-1585	-800	0	multi-exon	FALSE	canonical	3	37	junction_1	36.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGTGAGTCTTCAATGA	231	False	NA	NA	False	AATAAA	-20	NA	3282684	3291460	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3284206_3288453_3288571_3289392
H1_mix_00030805	chr16	+	2360	6	FSM	ENSG00000162086.16	ENST00000574298.6	2361	6	0	1	0	0	multi-exon	TRUE	canonical	3	3	junction_1	30.0931885980864	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAAGTGTTGGGCGAGGAT	NA	False	NA	NA	False	AATAAA	-17	NA	3305471	3318851	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3305644_3311752_3311949_3312676_3312769_3313048_3313176_3316911_3317023_3317189
H1_mix_00030806	chr16	+	609	5	FSM	ENSG00000162086.16	ENST00000571101.5	598	5	-11	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	36.9687367920517	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATCAGCAGGCGTCATA	3	True	NA	NA	False	NA	NA	NA	3305496	3317252	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3305644_3311752_3311949_3312676_3312769_3316911_3317023_3317189
H1_mix_00030807	chr16	+	2859	7	FSM	ENSG00000162086.16	ENST00000669516.2	2859	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	21.7153299665364	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAAGTGTTGGGCGAGGAT	3	True	NA	NA	False	AATAAA	-17	NA	3305496	3318851	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3305644_3308312_3308837_3311752_3311949_3312676_3312769_3313048_3313176_3316911_3317023_3317189
H1_mix_00030808	chr16	+	2783	2	FSM	ENSG00000162086.16	ENST00000575253.1	1289	2	-366	-1128	-366	0	multi-exon	FALSE	canonical	3	71	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCCTGCCTTGCAATGTC	NA	False	NA	16	True	AATAAA	-17	NA	3315624	3318574	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3317023_3317189
H1_mix_00030809	chr16	+	1557	3	FSM	ENSG00000103343.13	ENST00000344823.9	1557	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	28.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCCTCAAATCTATTTCC	19	True	NA	43	True	NA	NA	NA	3401243	3405079	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3402407_3404425_3404649_3404908
H1_mix_00030812	chr16	+	1924	2	FSM	ENSG00000122390.19	ENST00000574762.1	537	2	-97	-1290	3	92	multi-exon	FALSE	canonical	3	38	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCAGAGGCTGGTCAGCA	2	True	NA	NA	False	NA	NA	NA	3443690	3450257	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3443828_3448470
H1_mix_00030815	chr16	+	2645	8	FSM	ENSG00000122390.19	ENST00000407558.9	2656	8	11	0	3	0	multi-exon	FALSE	canonical	0	0	junction_6	144.772164423403	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCGTCACATCCTGTTTCC	2	True	NA	14	True	AATAAA	-16	NA	3443690	3486953	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3443838_3448470_3448541_3476221_3476338_3479470_3479601_3482501_3482599_3483362_3483598_3484698_3485062_3485466
H1_mix_00030816	chr16	+	337	3	FSM	ENSG00000122390.19	ENST00000615865.1	326	3	-11	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	16.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGGATAATTCACTGTCC	34	True	NA	NA	False	AATAAA	-17	NA	3443722	3450165	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3443828_3448470_3448541_3450003
H1_mix_00030818	chr16	+	2628	7	FSM	ENSG00000122390.19	ENST00000414063.6	2619	7	-9	0	-9	0	multi-exon	TRUE	canonical	0	0	junction_5	137.7672150969	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCGTCACATCCTGTTTC	0	True	NA	13	True	AATAAA	-15	NA	3458002	3486952	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3483362_3483598_3484698_3485084_3485466
H1_mix_00030819	chr16	+	2512	6	FSM	ENSG00000122390.19	ENST00000360862.9	2522	6	10	0	-9	0	multi-exon	FALSE	canonical	0	0	junction_4	147.199184780351	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCGTCACATCCTGTTTC	0	True	NA	13	True	AATAAA	-15	NA	3458002	3486952	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3458182_3479470_3479601_3482501_3482599_3483362_3483598_3484698_3485084_3485466
H1_mix_00030820	chr16	+	2931	6	FSM	ENSG00000122390.19	ENST00000572584.2	2931	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	130.752590796512	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTCTCATTACGAGCAAA	11	True	NA	-25	True	NA	NA	NA	3458044	3486914	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3483362_3483598_3484698
H1_mix_00030821	chr16	+	2538	7	FSM	ENSG00000122390.19	ENST00000575076.5	2531	7	-7	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	121.4780501435	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCGTCACATCCTGTTTC	-4	True	NA	13	True	AATAAA	-15	NA	3458070	3486952	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3483362_3483598_3484698_3485062_3485466
H1_mix_00030824	chr16	+	4102	12	FSM	ENSG00000103351.13	ENST00000576634.6	4083	12	-19	0	3	0	multi-exon	FALSE	canonical	3	63	junction_6	10.8025096563731	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATTGGTAGTAGTTAT	-8	True	NA	NA	False	AATACA	-23	NA	3500984	3539048	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3501090_3504719_3504832_3506330_3506416_3508288_3508469_3512382_3512479_3515507_3515592_3519902_3520037_3523157_3523300_3526411_3526485_3530567_3530676_3532785_3532842_3536121
H1_mix_00030826	chr16	+	915	3	ISM	ENSG00000213918.11	ENST00000570769.5	2732	12	32	15059	32	-9078	5prime_fragment	FALSE	canonical	3	16	junction_1	5.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCCCCACTTCCTGCTC	14	True	NA	NA	False	NA	NA	NA	3611759	3643036	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_3612007_3640714_3641238_3642891
H1_mix_00030827	chr16	+	3797	8	NIC	ENSG00000213918.11	novel	1346	9	NA	NA	-2482	73	intron_retention	FALSE	canonical	3	6	junction_5	8.85944670497923	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGGAGGTGATGCTGAAG	9248	False	NA	NA	False	NA	NA	NA	3652184	3657930	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_3655045_3655372_3655521_3655848_3655938_3656101_3656186_3656637_3656754_3656963_3657342_3657719_3657817_3657905
H1_mix_00030828	chr16	+	580	2	FSM	ENSG00000213918.11	ENST00000576792.1	580	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATCATGGCGTTCTCGTA	1947	False	NA	NA	False	NA	NA	NA	3657249	3658207	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3657342_3657719
H1_mix_00030830	chr16	+	3942	7	FSM	ENSG00000126603.9	ENST00000433375.2	3900	7	-42	0	-42	0	multi-exon	TRUE	canonical	2	8	junction_1	3.94405318873308	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGTATGTCGTGGATG	-8	True	NA	16	True	AATAAA	-16	NA	4316024	4339595	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4316255_4332214_4332453_4333346_4333520_4334800_4334978_4335059_4335194_4335274_4335394_4336724
H1_mix_00030832	chr16	+	565	3	FSM	ENSG00000103423.14	ENST00000573120.5	403	3	-208	46	-20	-46	multi-exon	FALSE	canonical	3	354	junction_1	80	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCAGTGTGAAGGCCATG	NA	False	NA	NA	False	NA	NA	NA	4425839	4437579	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4426093_4434383_4434518_4437401
H1_mix_00030834	chr16	+	2714	12	FSM	ENSG00000103423.14	ENST00000262375.11	2700	12	-14	0	-6	0	multi-exon	FALSE	canonical	3	91	junction_11	152.864440567722	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTCATTTCTTCTTTG	-16	True	NA	17	True	AAAAAG	-17	NA	4425853	4456775	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4426093_4434383_4434518_4437401_4437486_4441374_4441576_4442267_4442421_4443016_4443165_4444663_4444729_4446885_4447015_4448732_4448849_4450399_4450498_4454810_4454928_4455545
H1_mix_00030835	chr16	+	1665	6	FSM	ENSG00000103415.12	ENST00000406590.6	1727	6	62	0	62	0	multi-exon	FALSE	canonical	1	6	junction_1	189.877434151613	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCTTCCCTGCCTCCTG	42	False	NA	12	True	AATAAA	-17	NA	4474764	4510346	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4474848_4505483_4505611_4506894_4507013_4507712_4508205_4509411_4509539_4509628
H1_mix_00030836	chr16	+	1822	7	FSM	ENSG00000103415.12	ENST00000458134.7	1797	7	27	-52	-12	0	multi-exon	FALSE	canonical	3	25	junction_2	212.998435049024	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTTCCCTGCCTCCTGG	-43	True	NA	13	True	AATAAA	-18	NA	4476366	4510347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4476488_4483636_4483755_4505483_4505611_4506894_4507013_4507712_4508205_4509411_4509539_4509628
H1_mix_00030837	chr16	+	1697	6	FSM	ENSG00000103415.12	ENST00000570646.6	1673	6	-24	0	-5	0	multi-exon	FALSE	canonical	3	370	junction_1	53.4475443776419	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTTCCCTGCCTCCTGG	-36	True	NA	13	True	AATAAA	-18	NA	4476373	4510347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4476488_4505483_4505611_4506894_4507013_4507712_4508205_4509411_4509539_4509628
H1_mix_00030839	chr16	+	1704	6	FSM	ENSG00000103415.12	ENST00000613539.1	1703	6	-1	0	-1	0	multi-exon	FALSE	canonical	3	13	junction_1	187.123488637851	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCTTCCCTGCCTCCTG	287	False	NA	12	True	AATAAA	-17	NA	4496144	4510346	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4496267_4505483_4505611_4506894_4507013_4507712_4508205_4509411_4509539_4509628
H1_mix_00030840	chr16	+	4017	16	FSM	ENSG00000205832.8	ENST00000444310.5	4017	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	1.4996295838936	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCCAACAAGCCAATTTA	0	True	NA	NA	False	TATAAA	-20	NA	4556339	4600758	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4556910_4571560_4571666_4574708_4574790_4574971_4575059_4575173_4576636_4578939_4579026_4580014_4580126_4587038_4587114_4588166_4588332_4591665_4591785_4592304_4592368_4593223_4593317_4594350_4594511_4594703_4594804_4599283_4599365_4600099
H1_mix_00030841	chr16	+	3950	17	FSM	ENSG00000102858.13	ENST00000262370.12	3930	17	-20	0	-18	0	multi-exon	TRUE	canonical	3	78	junction_12	60.0279882638091	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGTCTGCTCCTTCCT	10	False	NA	55	True	AATAAA	-13	NA	4624805	4690972	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4625049_4650364_4650484_4651962_4652052_4652677_4652825_4657245_4657364_4664708_4664776_4665101_4665152_4668264_4668313_4671390_4671460_4673497_4673658_4677462_4677573_4680031_4680098_4681549_4681777_4682822_4682947_4683223_4683270_4683842_4683933_4688795
H1_mix_00030842	chr16	+	6425	17	FSM	ENSG00000102858.13	ENST00000399577.9	6425	17	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_16	70.6017660898083	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGTCTGCTCCTTCCT	23	True	NA	55	True	AATAAA	-13	NA	4624867	4690972	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4625049_4650364_4650484_4651962_4652052_4652677_4652825_4657245_4657364_4664708_4664776_4665101_4665152_4668264_4668313_4671390_4671460_4673497_4673658_4677462_4677573_4680031_4680098_4681549_4681777_4682822_4682947_4683223_4683270_4683842_4683933_4686258
H1_mix_00030843	chr16	+	3867	17	FSM	ENSG00000102858.13	ENST00000586183.5	1841	17	-93	-1933	0	0	multi-exon	FALSE	canonical	3	53	junction_15	66.8372264815799	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGTCTGCTCCTTCCT	23	True	NA	55	True	AATAAA	-13	NA	4624867	4690972	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4625049_4650364_4650484_4651962_4652052_4652677_4652825_4657245_4657364_4664708_4664776_4665101_4665152_4668264_4668313_4671390_4671460_4673497_4673658_4677462_4677573_4681549_4681777_4682822_4682947_4683223_4683270_4683842_4683933_4686258_4686304_4688795
H1_mix_00030846	chr16	+	2165	2	FSM	ENSG00000168101.14	ENST00000405142.1	2040	2	-125	0	-101	0	multi-exon	FALSE	canonical	3	510	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGCTGCCCTGTGTGTTT	NA	False	NA	24	True	AATAAA	-28	NA	4693592	4695855	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4693880_4693977
H1_mix_00030847	chr16	+	1352	3	FSM	ENSG00000168101.14	ENST00000304301.10	1349	3	-3	0	-3	0	multi-exon	FALSE	canonical	3	401	junction_2	54.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCCTGTGTGTTTGTTT	-6	True	NA	28	True	AATAAA	-32	NA	4693690	4695859	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4693880_4693977_4694239_4694957
H1_mix_00030848	chr16	+	1419	3	FSM	ENSG00000168101.14	ENST00000586536.1	1406	3	-13	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	240.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCCTGTGTGTTTGTTT	-3	True	NA	28	True	AATAAA	-32	NA	4693693	4695859	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4693880_4693977_4694309_4694957
H1_mix_00030849	chr16	+	360	3	FSM	ENSG00000267795.6	ENST00000586440.1	549	3	-19	208	-9	2	multi-exon	FALSE	canonical	2	2	junction_2	1.5	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTCTGCAGTGTCTTCC	36	False	NA	NA	False	NA	NA	NA	4795693	4796283	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4795859_4795947_4796049_4796189
H1_mix_00030850	chr16	+	6402	18	FSM	ENSG00000118900.15	ENST00000262376.11	6443	18	0	41	0	0	multi-exon	FALSE	canonical	3	100	junction_5	9.79478005179166	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTTTCTCACTCTTTTC	6	True	NA	21	True	AATAAA	-21	NA	4847480	4882360	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4848211_4852878_4853167_4857989_4858077_4858567_4858664_4859024_4859160_4859864_4859969_4860663_4861103_4868832_4868904_4870211_4870342_4870515_4870635_4870843_4870973_4871154_4871302_4872883_4872935_4873030_4873074_4874210_4875435_4876870_4877112_4877384_4877475_4880082
H1_mix_00030851	chr16	+	3530	17	FSM	ENSG00000118900.15	ENST00000590769.5	3530	17	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	34.5691675304743	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGGAGCCGGGCCCTTGC	433	False	NA	NA	False	NA	NA	NA	4848379	4880294	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4848394_4852878_4853167_4857989_4858077_4858567_4858664_4859024_4859160_4859864_4859969_4860663_4861103_4868832_4868904_4870211_4870342_4870515_4870635_4870843_4870973_4871154_4871302_4872883_4872935_4873030_4873074_4874210_4875435_4876870_4877112_4880082
H1_mix_00030853	chr16	+	5147	6	ISM	ENSG00000103184.12	ENST00000251170.12	6445	16	45080	-7	44155	7	3prime_fragment	FALSE	canonical	2	9	junction_1	2.0591260281974	400	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTTTTCTTTGT	299	False	NA	20	True	NA	NA	NA	5003409	5019164	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_5003574_5005913_5006049_5007351_5007487_5008420_5008649_5011094_5011274_5014858
H1_mix_00030854	chr16	+	1952	12	FSM	ENSG00000033011.14	ENST00000684335.1	1952	12	0	0	0	0	multi-exon	TRUE	canonical	3	6	junction_9	90.0556301900421	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTTGGAAATTAACATTC	NA	False	NA	-55	True	NA	NA	NA	5071805	5085505	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_5072058_5072950_5073029_5073152_5073257_5075387_5075537_5077444_5077535_5077906_5078018_5078756_5078879_5079063_5079103_5079747_5079808_5082558_5082674_5083681_5083758_5084749
H1_mix_00030855	chr16	+	2094	13	FSM	ENSG00000033011.14	ENST00000682797.1	2094	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	85.4294299407411	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCCAGTCCAATGAAAGTT	NA	False	NA	-28	True	NA	NA	NA	5071805	5085532	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_5072058_5072950_5073029_5073152_5073257_5075387_5075537_5077444_5077535_5077906_5078018_5078756_5078879_5079063_5079107_5079747_5079808_5080945_5081057_5082558_5082674_5083681_5083758_5084749
H1_mix_00030857	chr16	+	3900	13	FSM	ENSG00000033011.14	ENST00000262374.10	3900	13	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_12	21.5450110234365	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCGCTATGTTGCTCAAG	9	True	NA	11	True	GATAAA	-18	NA	5071842	5087379	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_5072058_5072950_5073029_5073152_5073257_5075387_5075537_5077444_5077535_5077906_5078018_5078756_5078879_5079063_5079103_5079747_5079808_5080945_5081057_5082558_5082674_5083681_5083758_5084749
H1_mix_00030860	chr16	+	1525	10	FSM	ENSG00000067365.15	ENST00000163678.11	1510	10	-15	0	-7	0	multi-exon	FALSE	canonical	3	61	junction_3	45.8693797647189	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGAGATTTTGTCATTT	NA	False	NA	23	True	AGTAAA	-24	NA	8621675	8646224	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_8621776_8625495_8625799_8628729_8629111_8635167_8635313_8639090_8639163_8641130_8641185_8642126_8642208_8642462_8642566_8644556_8644726_8646107
H1_mix_00030862	chr16	+	1410	10	NIC	ENSG00000067365.15	novel	4974	11	NA	NA	-22	0	intron_retention	FALSE	canonical	3	24	junction_9	59.845067455601	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTTGAGATTTTGTCAT	NA	False	NA	21	True	AGTAAA	-22	NA	8621660	8646222	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_8621776_8625495_8625799_8628729_8629111_8635038_8635080_8635167_8635313_8639090_8639163_8641130_8641185_8642126_8642208_8642462_8642566_8646107
H1_mix_00030867	chr16	+	4792	16	FSM	ENSG00000183044.12	ENST00000268251.13	4779	16	-13	0	8	0	multi-exon	FALSE	canonical	3	23	junction_7	3.80992854992788	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGTGAATGTGGACTTT	14	False	NA	9	True	AATAAA	-15	NA	8674603	8784570	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_8674712_8735698_8735810_8746000_8746099_8748107_8748138_8750421_8750540_8757756_8757807_8764068_8764150_8764737_8764831_8766207_8766271_8768192_8768257_8768824_8768974_8772779_8772918_8774889_8775058_8776343_8776491_8779478_8779591_8781308
H1_mix_00030869	chr16	+	1006	7	FSM	ENSG00000140650.13	ENST00000682008.1	1085	7	79	0	-15	0	multi-exon	FALSE	canonical	3	273	junction_3	37.6991010797635	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCAGTCCCCGGTGCCACT	NA	False	NA	NA	False	ATTAAA	-29	NA	8797794	8813385	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_8797949_8801798_8801911_8804766_8804844_8806315_8806408_8811078_8811179_8811637_8811714_8812990
H1_mix_00030871	chr16	+	2317	8	FSM	ENSG00000140650.13	ENST00000268261.9	2285	8	-44	12	-15	0	multi-exon	FALSE	canonical	3	273	junction_3	38.2425129393763	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTATTGTTTCCTGTTT	NA	False	NA	13	True	ATTAAA	-3	NA	8797794	8849313	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_8797949_8801798_8801911_8804766_8804844_8806315_8806408_8811078_8811179_8811637_8811714_8812990_8813107_8847723
H1_mix_00030872	chr16	+	810	6	FSM	ENSG00000140650.13	ENST00000565221.5	793	6	-17	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	135.529480187891	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGGAATGCCTCGCACAAA	4	True	NA	NA	False	NA	NA	NA	8797849	8848030	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_8797949_8801798_8801911_8811078_8811179_8811637_8811714_8812990_8813107_8847723
H1_mix_00030873	chr16	+	5413	4	FSM	ENSG00000140650.13	ENST00000567697.2	5397	4	-16	0	-16	0	multi-exon	FALSE	canonical	3	301	junction_1	28.6472802664872	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTATTGTTTCCTGTTT	3496	False	NA	13	True	ATTAAA	-3	NA	8807547	8849313	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_8811179_8811637_8811714_8812990_8813107_8847723
H1_mix_00030874	chr16	+	837	1	FSM	ENSG00000140650.13	ENST00000613908.1	644	1	-36	-157	-36	157	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCAGGGCTGGTGATGGGG	7770	False	NA	NA	False	NA	NA	NA	8859776	8860613	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_8859800_8860600
H1_mix_00030876	chr16	+	10359	3	FSM	ENSG00000182831.12	ENST00000574285.2	10359	3	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_1	4	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTTGGTTGTTAATCT	564	False	NA	20	True	AATAAA	-21	NA	9092190	9113181	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_9092271_9092920_9093002_9102983
H1_mix_00030879	chr16	+	1730	1	FSM	ENSG00000166669.14	ENST00000562396.1	1681	1	-49	0	-43	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATTAGTTCTCATTGTT	NA	False	NA	11	True	AATAAA	-21	NA	10386011	10387741	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_10386000_10387700
H1_mix_00030880	chr16	+	3707	12	FSM	ENSG00000166669.14	ENST00000396560.6	3665	12	-43	1	-43	0	multi-exon	FALSE	canonical	3	26	junction_1	10.7956220082705	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTCTATGTCTTTATTT	NA	False	NA	10	True	AATAAA	-16	NA	10386011	10483637	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_10386123_10428867_10429017_10430610_10431456_10433524_10433650_10438100_10438236_10440363_10440463_10457371_10457530_10472109_10472184_10473478_10473535_10473922_10473990_10480878_10480965_10481835
H1_mix_00030881	chr16	+	1605	2	FSM	ENSG00000166669.14	ENST00000570163.1	559	2	-1031	-15	0	11	multi-exon	FALSE	canonical	3	101	junction_1	0	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATTGTTGAGCGAGATGA	2	True	NA	22	True	AATAAA	-32	NA	10386060	10387752	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_10387291_10387377
H1_mix_00030882	chr16	+	3406	10	FSM	ENSG00000166669.14	ENST00000568027.5	3406	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	16.1826000139	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTCTATGTCTTTATTTT	32	False	NA	11	True	AATAAA	-17	NA	10428900	10483638	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_10429017_10430610_10431456_10433524_10433650_10438100_10438236_10440363_10440463_10472109_10472184_10473478_10473535_10473922_10473990_10480878_10480965_10481835
H1_mix_00030884	chr16	+	1231	11	FSM	ENSG00000103274.11	ENST00000283027.10	1231	11	0	0	0	0	multi-exon	TRUE	canonical	3	194	junction_10	35.5681036885578	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCCGAGGCCTGTTTCAC	6	True	NA	23	True	AATAAA	-16	NA	10743841	10769351	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_10743883_10743960_10744066_10747142_10747277_10752609_10752679_10755720_10755754_10756689_10756781_10757872_10758028_10761363_10761475_10761756_10761860_10767948_10768033_10769046
H1_mix_00030888	chr16	+	3381	21	FSM	ENSG00000038532.16	ENST00000409552.4	3365	21	-16	0	1	0	multi-exon	FALSE	canonical	3	33	junction_10	10.7638283152417	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTCGAAAGAGAGCCTTT	-26	True	NA	NA	False	AGTAAA	-17	NA	10944564	11126787	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_10944798_10957781_10957911_10962454_10962589_10969160_10969310_10971124_10971231_10972937_10973062_10977224_10977400_10979328_10979383_10982877_10982992_11003073_11003258_11020192_11020326_11024820_11024922_11039753_11039877_11042253_11042364_11044027_11044073_11047291_11047343_11051512_11051642_11060901_11061023_11120614_11120767_11123741_11123947_11125978
H1_mix_00030889	chr16	+	6760	23	NIC	ENSG00000038532.16	novel	6812	24	NA	NA	1	3	combination_of_known_junctions	FALSE	canonical	3	28	junction_22	11.5537729517888	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTAGCGTGCTGCTCCTGGG	-26	True	NA	31	True	AATAAA	-23	NA	10944564	11182189	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_10944798_10957781_10957911_10962454_10962589_10969160_10969310_10971124_10971231_10972937_10973062_10977224_10977400_10979328_10979383_10982877_10982992_11003073_11003258_11020192_11020326_11024820_11024922_11039753_11039877_11042253_11042364_11044027_11044073_11047291_11047343_11051512_11051642_11060901_11061023_11120614_11120767_11123741_11123947_11125978_11126147_11166387_11166553_11178334
H1_mix_00030890	chr16	+	2596	1	FSM	ENSG00000274038.1	ENST00000615581.1	479	1	-966	-1151	-966	1151	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGCTTCTCATGTGTCC	3134	False	NA	NA	False	NA	NA	NA	11055589	11058185	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_11055600_11058200
H1_mix_00030892	chr16	+	574	1	FSM	ENSG00000263179.1	ENST00000571636.1	900	1	-13	339	-13	-339	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCTTCAGGCCATTAAGC	3821	False	NA	NA	False	NA	NA	NA	11242639	11243213	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_11242600_11243200
H1_mix_00030897	chr16	+	8183	21	FSM	ENSG00000048471.14	ENST00000566228.6	8173	21	-10	0	-10	0	multi-exon	FALSE	canonical	1	2	junction_19	4.73787927241714	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTCTCTGTCTCAGTTC	-15	True	NA	16	True	TATAAA	-16	NA	11976723	12574287	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_11976814_11999296_11999359_12002990_12003044_12027319_12027445_12042896_12043078_12046383_12046455_12048371_12048621_12051846_12052223_12061527_12061647_12069056_12069133_12078832_12078916_12126632_12126697_12129629_12129759_12199600_12199684_12277932_12278037_12356162_12356280_12398445_12398502_12403447_12403530_12477718_12477860_12524701_12524842_12568505
H1_mix_00030898	chr16	+	324	1	FSM	ENSG00000241932.1	ENST00000468671.1	324	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAACTAATGAAAAGTCAA	NA	False	NA	NA	False	NA	NA	NA	12881169	12881493	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_12881200_12881500
H1_mix_00030901	chr16	+	4172	2	FSM	ENSG00000237515.9	ENST00000423335.2	4043	2	-135	6	2	-6	multi-exon	FALSE	canonical	3	60	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTCCTCCTGAGCATTT	-4	True	NA	14	True	AATAAA	-17	NA	12901621	12911644	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_12902628_12908478
H1_mix_00030902	chr16	+	3669	8	FSM	ENSG00000175595.16	ENST00000683407.1	2803	8	-15	-851	5	851	multi-exon	FALSE	canonical	3	31	junction_4	6.20730313782869	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACCTTTAACAGGTGGGG	-27	True	NA	NA	False	AATAAA	-20	NA	13920142	13937578	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_13920373_13922030_13922212_13926560_13926757_13928027_13928236_13930709_13930891_13932156_13932286_13934191_13934303_13935145
H1_mix_00030903	chr16	+	6772	11	FSM	ENSG00000175595.16	ENST00000311895.8	6764	11	-11	3	5	-3	multi-exon	FALSE	canonical	2	4	junction_8	16.4085343647749	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTTTTGCTGTTTAATT	-27	True	NA	14	True	AATAAA	-25	NA	13920142	13952345	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_13920373_13922030_13922212_13926560_13926757_13928027_13928236_13930709_13930891_13932156_13932286_13934191_13934303_13935145_13935744_13937765_13937859_13944722_13944836_13947613
H1_mix_00030906	chr16	+	8921	17	FSM	ENSG00000186260.17	ENST00000571589.6	8804	17	-117	0	-117	0	multi-exon	TRUE	canonical	2	37	junction_15	14.7266764750231	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGATTCTTGCTGTGCAG	126	False	NA	15	True	AATAAA	-16	NA	14071201	14266773	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_14071366_14079289_14079355_14140543_14140761_14210242_14210309_14212353_14212410_14213544_14213621_14217125_14217288_14218819_14218999_14234145_14234284_14240236_14240485_14245527_14245661_14246472_14247508_14248925_14249082_14251861_14252024_14252364_14252503_14258100_14258162_14260908
H1_mix_00030907	chr16	+	547	5	FSM	ENSG00000186260.17	ENST00000574998.5	545	5	-2	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	26.6774717692663	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATGCCACGTAAGATTTA	-5	True	NA	NA	False	NA	NA	NA	14071318	14210298	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_14071366_14079289_14079355_14092720_14092883_14140543_14140761_14210242
H1_mix_00030908	chr16	+	618	5	FSM	ENSG00000186260.17	ENST00000575537.5	618	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	40.7269873671009	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATAGGAAGGAAAAGTTC	20	True	NA	NA	False	NA	NA	NA	14071343	14149536	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_14071366_14079289_14079355_14140543_14140761_14148666_14148730_14149285
H1_mix_00030909	chr16	+	486	3	FSM	ENSG00000186260.17	ENST00000575833.1	486	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	11.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCACACTCACAAGTATAT	NA	False	NA	NA	False	NA	NA	NA	14092836	14141529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_14092883_14140543_14140761_14141306
H1_mix_00030910	chr16	+	4817	1	FSM	ENSG00000276564.1	ENST00000618736.1	2403	1	-2397	-17	-2397	17	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTCTCTCAAGCCAAGAA	NA	False	NA	NA	False	AATAAA	-36	NA	14148435	14153252	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_14148400_14153300
H1_mix_00030920	chr16	+	4314	31	FSM	ENSG00000103512.16	ENST00000287667.12	4312	31	-2	0	-2	0	multi-exon	TRUE	canonical	3	934	junction_11	364.893836920031	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAGATGTATTTCTTGGA	1	True	NA	24	True	AATAAA	-29	NA	14833718	14896157	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_14834017_14838406_14838497_14841361_14841408_14844673_14844775_14846576_14846684_14848898_14848972_14852429_14852583_14853466_14853605_14853936_14854027_14857216_14857323_14857504_14857656_14863012_14863188_14864584_14864727_14865023_14865156_14866554_14866692_14868547_14868636_14871620_14871685_14872233_14872330_14875035_14875255_14875339_14875423_14876358_14876519_14876663_14876791_14878720_14878835_14880014_14880143_14881543_14881686_14882593_14882678_14884371_14884483_14886760_14886863_14889095_14889216_14894997_14895091_14895513
H1_mix_00030928	chr16	+	2339	17	FSM	ENSG00000179889.20	ENST00000535621.6	2048	17	-291	0	-16	0	multi-exon	FALSE	canonical	3	66	junction_16	157.912740441517	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCGACCTAACTCCATCTAA	NA	False	NA	NA	False	AATAAA	-41	NA	14974720	15139339	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_14975221_14997752_14997827_14998339_14998406_15001775_15001857_15004186_15004334_15006393_15006584_15008778_15008848_15009680_15009760_15016128_15016214_15017119_15017169_15017320_15017423_15018839_15018966_15022703_15022755_15026642_15026707_15028877_15028967_15029950_15030057_15138878
H1_mix_00030930	chr16	+	3775	22	FSM	ENSG00000179889.20	ENST00000569715.5	3775	22	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	154.233383247391	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGTGAATTCAGTTTATAA	6	True	NA	18	True	AATAAA	-18	NA	14975122	15037687	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_14975221_14997752_14997827_14998339_14998406_15004186_15004334_15006393_15006584_15008778_15008848_15009680_15009760_15016128_15016214_15017119_15017169_15017320_15017423_15018839_15018966_15022703_15022755_15026642_15026707_15028877_15028967_15029950_15030057_15031734_15031907_15032860_15032980_15033277_15033400_15034285_15034379_15034456_15034554_15035448_15035554_15036015
H1_mix_00030931	chr16	+	4166	20	FSM	ENSG00000179889.20	ENST00000450288.3	4171	20	5	0	5	0	multi-exon	FALSE	canonical	2	8	junction_2	161.22967565014	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAATGAGGTGGCCTGAA	NA	False	NA	NA	False	AATAAA	-8	NA	14997752	15038323	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_14997827_14998339_14998406_15006393_15006584_15008778_15008848_15009680_15009760_15016128_15016214_15017119_15017169_15017320_15017423_15018839_15018966_15022703_15022755_15026642_15026707_15028877_15028967_15029950_15030057_15031734_15031907_15032860_15032980_15033277_15033400_15034285_15034379_15034456_15034554_15035448_15035554_15036015
H1_mix_00030935	chr16	+	3199	1	FSM	ENSG00000207294.1	ENST00000384564.1	100	1	-2325	-774	-2325	774	mono-exon	FALSE	NA	NA	NA	NA	NA	378	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCTGCAGTATTGCGATG	NA	False	NA	NA	False	NA	NA	NA	15148371	15151570	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_15148400_15151600
H1_mix_00030938	chr16	+	5910	4	FSM	ENSG00000156968.9	ENST00000396385.4	5894	4	-19	3	-19	0	multi-exon	FALSE	canonical	3	21	junction_1	3.77123616632825	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGAAAAAGTTTCTTTT	NA	False	NA	NA	False	ATTAAA	-22	NA	15395734	15413268	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_15396208_15400786_15400858_15407823_15407854_15407932
H1_mix_00030940	chr16	+	3373	9	NIC	ENSG00000072864.16	novel	3203	9	NA	NA	-82	1451	combination_of_known_junctions	FALSE	canonical	3	29	junction_8	10.6529045335063	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTTTGTATGTTTATAC	6542	False	NA	54	True	AATAAA	-44	NA	15650125	15701942	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_15650295_15664735_15664862_15667285_15667440_15677800_15677950_15687374_15687512_15691143_15691324_15694164_15694257_15696708_15696861_15699728
H1_mix_00030941	chr16	+	1221	9	FSM	ENSG00000072864.16	ENST00000396354.6	3203	9	-119	2101	-82	4	multi-exon	FALSE	canonical	3	42	junction_5	7.07106781186548	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTCTTGGTCTTTTCC	6542	False	NA	NA	False	NA	NA	NA	15650125	15724252	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_15650295_15664735_15664862_15667285_15667440_15677800_15677950_15687374_15687512_15691143_15691324_15694164_15694257_15696708_15696861_15724190
H1_mix_00030942	chr16	+	5861	10	FSM	ENSG00000072864.16	ENST00000675951.1	5861	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_9	14.6472936024558	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTTTTGGATTTATAGT	6628	False	NA	NA	False	NA	NA	NA	15650211	15734462	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_15650295_15664735_15664862_15667285_15667440_15677800_15677950_15687374_15687512_15691143_15691324_15694164_15694257_15696708_15696861_15724190_15727001_15732484
H1_mix_00030943	chr16	+	5709	9	FSM	ENSG00000072864.16	ENST00000674588.1	5693	9	-16	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	20.5715215771707	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTTTTGGATTTATAGT	6628	False	NA	NA	False	NA	NA	NA	15650211	15734462	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_15650295_15664735_15664862_15667285_15667440_15677800_15677950_15687374_15687512_15691143_15691324_15694164_15694257_15724190_15727001_15732484
H1_mix_00030944	chr16	+	774	7	FSM	ENSG00000072864.16	ENST00000573203.5	762	7	-12	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	23.6484671807709	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGACAGACACAGCTGTGC	-4	True	NA	NA	False	NA	NA	NA	15650244	15691219	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_15650295_15664735_15664862_15667285_15667440_15672689_15672772_15677800_15677950_15687374_15687512_15691143
H1_mix_00030945	chr16	+	1618	1	FSM	ENSG00000280206.1	ENST00000624682.1	882	1	-745	9	-745	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTCACAAGATGGAGTCCT	2374	False	NA	NA	False	NA	NA	NA	15700491	15702109	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_15700500_15702100
H1_mix_00030946	chr16	+	6517	31	FSM	ENSG00000103222.20	ENST00000399410.8	6504	31	-13	0	-13	0	multi-exon	FALSE	canonical	3	129	junction_4	34.0996089909156	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTATTTCTTTCTAA	-19	True	NA	16	True	AGTAAA	-19	NA	15949602	16143053	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_15949800_16007815_16007993_16009775_16009902_16014490_16014629_16016495_16016622_16033108_16033171_16036471_16036604_16044449_16044681_16045835_16046014_16048141_16048304_16052723_16052817_16056091_16056296_16068155_16068303_16071641_16071730_16076325_16076402_16079351_16079479_16083365_16083543_16086823_16086992_16090404_16090589_16102626_16102718_16106737_16106874_16111374_16111583_16114765_16115077_16121974_16122175_16124788_16124916_16125809_16125912_16131788_16131936_16134349_16134509_16136477_16136645_16138363_16138559_16141172
H1_mix_00030948	chr16	+	5207	32	FSM	ENSG00000103226.19	ENST00000676846.1	5231	32	24	0	0	0	multi-exon	TRUE	canonical	3	14	junction_31	483.112806030513	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAGTGTTATGAGCACA	6	True	NA	NA	False	NA	NA	NA	16232529	16300806	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_16232832_16236900_16236991_16239850_16239897_16243160_16243262_16245067_16245175_16247394_16247468_16250927_16251081_16251962_16252101_16252432_16252523_16255719_16255826_16256007_16256159_16261501_16261677_16263073_16263216_16263512_16263645_16265042_16265180_16267043_16267132_16270120_16270185_16270732_16270829_16273688_16273908_16273992_16274076_16275011_16275172_16275316_16275444_16277369_16277484_16278661_16278790_16280188_16280331_16281238_16281323_16283015_16283127_16285404_16285507_16287742_16287863_16293651_16293745_16294167_16294769_16299874
H1_mix_00030950	chr16	+	3915	32	FSM	ENSG00000103226.19	ENST00000263012.10	3911	32	-4	0	0	0	multi-exon	FALSE	canonical	3	25	junction_31	481.963772542817	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCATCATAGATGTATTTC	73	False	NA	NA	False	AATAAA	-24	NA	16232596	16294806	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_16232832_16236900_16236991_16239850_16239897_16243160_16243262_16245067_16245175_16247394_16247468_16250927_16251081_16251962_16252101_16252432_16252523_16255719_16255826_16256007_16256159_16261501_16261677_16263073_16263216_16263512_16263645_16265042_16265180_16267043_16267132_16270120_16270185_16270732_16270829_16273688_16273908_16273992_16274076_16275011_16275172_16275316_16275444_16277369_16277484_16278661_16278790_16280188_16280331_16281238_16281323_16283015_16283127_16285404_16285507_16287742_16287863_16293651_16293745_16294167_16294296_16294626
H1_mix_00030952	chr16	+	3113	2	FSM	ENSG00000103226.19	ENST00000570732.2	3147	2	34	0	34	0	multi-exon	FALSE	canonical	3	1708	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTGTGTTGTAGCTCAT	NA	False	NA	NA	False	AATAAA	-10	NA	16291256	16294792	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_16293745_16294167
H1_mix_00030955	chr16	+	7942	38	NNC	ENSG00000244257.5	novel	6805	32	NA	NA	-218	16412	intron_retention	FALSE	canonical	3	11	junction_15	104.198054097574	40	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTATGTTATTGCTTTGT	14	False	NA	NA	False	AATAAA	-33	NA	16310122	16350602	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_16310563_16316190_16316263_16316383_16316456_16316723_16316894_16317105_16317778_16317895_16318080_16318513_16318735_16318922_16319039_16319448_16319576_16319930_16320179_16320651_16321408_16322305_16322438_16322627_16322804_16323155_16323290_16323751_16323808_16324383_16324528_16324654_16324935_16325027_16325242_16325307_16325468_16325857_16326011_16326864_16327010_16327735_16327907_16328004_16328517_16328650_16328808_16328987_16329241_16329364_16329561_16331057_16331229_16331314_16331459_16331552_16331764_16331853_16331981_16333646_16333885_16340305_16340435_16344044_16344145_16344307_16344453_16347402_16347511_16348526_16348588_16348696_16348733_16350091
H1_mix_00030962	chr16	+	1161	4	ISM	ENSG00000227827.3	ENST00000532739.1	9932	31	194	19331	194	-19331	internal_fragment	FALSE	canonical	3	45	junction_3	57.7946556544999	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTGGGGAGTCTCAGG	NA	False	NA	NA	False	NA	NA	NA	16356417	16358176	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_16356489_16356756_16356927_16357138_16357811_16357928
H1_mix_00030964	chr16	+	1258	5	ISM	ENSG00000227827.3	ENST00000532739.1	9932	31	12245	7105	12245	-7105	internal_fragment	FALSE	canonical	0	0	junction_2	71.8518440960286	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGCTCCTTCCTGCCGT	NA	False	NA	NA	False	NA	NA	NA	16368468	16370402	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_16368816_16368942_16369223_16369315_16369530_16369595_16369756_16370145
H1_mix_00030966	chr16	+	559	1	FSM	ENSG00000228071.4	ENST00000497299.2	556	1	-3	0	-3	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGTGTCTACCATGATT	NA	False	NA	NA	False	AATGAA	-1	NA	17932716	17933275	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_17932700_17933300
H1_mix_00030967	chr16	+	1798	1	FSM	ENSG00000206927.1	ENST00000384200.1	100	1	-1625	-73	-1625	73	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGGATCACTTGAGGTCA	NA	False	NA	NA	False	NA	NA	NA	18396311	18398109	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_18396300_18398100
H1_mix_00030970	chr16	+	4394	16	FSM	ENSG00000170537.13	ENST00000304381.10	4401	16	0	7	0	-7	multi-exon	FALSE	canonical	3	50	junction_12	9.67379047851576	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAATGTGATCGTGTAT	0	True	NA	9	True	ATTAAA	-16	NA	18983933	19063935	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_18984131_19009171_19009416_19016449_19016599_19021628_19021797_19023112_19023196_19030223_19030370_19035675_19035824_19037873_19038048_19040288_19040447_19044883_19045002_19045340_19045439_19047062_19047250_19051685_19051817_19056541_19056698_19059415_19059495_19061777
H1_mix_00030974	chr16	+	3106	8	FSM	ENSG00000103528.17	ENST00000355377.7	3088	8	-19	1	-19	-1	multi-exon	FALSE	canonical	3	19	junction_7	12.5454276572001	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTCGAGTTATCTTTTTC	NA	False	NA	12	True	ATTAAA	-20	NA	19168220	19268331	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_19168662_19172759_19172778_19173429_19173579_19180390_19180540_19183527_19184148_19223044_19223166_19224682_19224839_19266879
H1_mix_00030975	chr16	+	1775	8	NIC	ENSG00000103528.17	novel	3088	8	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	26	junction_7	10.5133539959852	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTGTGTGTCTGGTTGCT	-24	True	NA	16	True	AATAAA	-17	NA	19168239	19250080	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_19168662_19172759_19172778_19173429_19173579_19180390_19180540_19183527_19184148_19223044_19223166_19224682_19224839_19249940
H1_mix_00030976	chr16	+	4889	22	FSM	ENSG00000103534.17	ENST00000396229.6	4917	22	0	28	0	-28	multi-exon	FALSE	canonical	1	2	junction_8	3.51349842775176	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATTAAAAGTCTTATTC	-6	True	NA	NA	False	AATAAA	-17	NA	19410734	19499085	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_19411177_19430412_19430641_19439959_19440827_19444080_19444251_19449541_19449632_19460234_19460335_19463279_19463368_19463775_19464025_19466081_19466234_19469680_19469826_19472087_19472244_19474124_19474277_19477439_19477519_19479430_19479529_19481369_19481466_19486944_19487021_19487192_19487327_19490394_19490569_19492149_19492229_19494261_19494367_19497120_19497164_19497919
H1_mix_00030977	chr16	+	5414	15	FSM	ENSG00000103540.16	ENST00000381396.9	5446	15	32	0	10	0	multi-exon	FALSE	canonical	3	24	junction_13	22.9241206183018	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTTTGATTGTTTTTAT	11	True	NA	NA	False	AATAAA	-20	NA	19523888	19553408	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_19524089_19527866_19528023_19532415_19532545_19535939_19537588_19540656_19540788_19541886_19542065_19542620_19542761_19542877_19542995_19544796_19544899_19545093_19545211_19545816_19545891_19546411_19546475_19547954_19548015_19548514_19548601_19551195
H1_mix_00030978	chr16	+	5822	15	FSM	ENSG00000103540.16	ENST00000396212.6	5549	15	38	-311	-8	311	multi-exon	FALSE	canonical	3	30	junction_1	24.8953933940578	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAAGACTCCATCTCAAAA	-29	True	NA	NA	False	NA	NA	NA	19523848	19553719	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_19524089_19525718_19525862_19527866_19528023_19532415_19532545_19535939_19537588_19540656_19540788_19541886_19542065_19542620_19542761_19542877_19542995_19544796_19544899_19545093_19545211_19545816_19545891_19546411_19546475_19547954_19548015_19551195
H1_mix_00030980	chr16	+	2729	9	ISM	ENSG00000174628.16	ENST00000320394.10	3482	10	1827	78	0	-78	3prime_fragment	FALSE	canonical	3	37	junction_5	17.8075651058756	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCACGACTTTCCATGGC	-10	True	NA	NA	False	ATTAAA	-45	NA	19718282	19858389	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_19718488_19730429_19730495_19733697_19733828_19735352_19735451_19763847_19763901_19764034_19764113_19788837_19788923_19827025_19827138_19856486
H1_mix_00030981	chr16	+	946	8	FSM	ENSG00000174628.16	ENST00000561839.5	946	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	26.467538839962	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTCTTCACTTTCTGCAT	22	True	NA	NA	False	AAGAAA	-4	NA	19718314	19856736	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_19718488_19730429_19730495_19733697_19733828_19763847_19763901_19764034_19764113_19788837_19788923_19827025_19827138_19856486
H1_mix_00030982	chr16	+	2498	6	NIC	ENSG00000174628.16	novel	1915	7	NA	NA	4	-32	intron_retention	FALSE	canonical	3	16	junction_3	27.2426136778394	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGCTTGGACAATAAAGAAC	-23	True	NA	NA	False	NA	NA	NA	19718330	19858435	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_19718488_19730429_19730495_19733697_19733828_19788837_19788923_19827025_19827138_19856486
H1_mix_00030992	chr16	+	1399	3	FSM	ENSG00000102897.10	ENST00000412082.6	1399	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	78	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTGTCTGTCTATTCT	348	False	NA	9	True	AATAAA	-15	NA	20900234	20925004	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_20900536_20920121_20920215_20923999
H1_mix_00030993	chr16	+	1713	5	FSM	ENSG00000102897.10	ENST00000219168.8	1626	5	-87	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	56.8391370448215	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTGTCTGTCTATTCT	3	True	NA	9	True	AATAAA	-15	NA	20900665	20925004	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_20900890_20902485_20902718_20915555_20915715_20920121_20920215_20923999
H1_mix_00030994	chr16	+	1607	4	FSM	ENSG00000102897.10	ENST00000567954.6	1378	4	-231	2	49	0	multi-exon	FALSE	canonical	3	52	junction_1	44.6119067315243	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTGTCTGTCTATTCT	-1	True	NA	9	True	AATAAA	-15	NA	20900539	20925004	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_20900890_20915555_20915715_20920121_20920215_20923999
H1_mix_00030995	chr16	+	1359	7	FSM	ENSG00000011638.11	ENST00000573487.5	1593	7	234	0	-50	0	multi-exon	FALSE	canonical	2	5	junction_5	42.2311759512119	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAACAAGCCCTTCTGTGG	5062	False	NA	NA	False	AATGAA	-16	NA	21158610	21179987	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_21158747_21161084_21161279_21166839_21166912_21170436_21170606_21174009_21174149_21178796_21178933_21179474
H1_mix_00030997	chr16	+	1830	5	FSM	ENSG00000011638.11	ENST00000261388.7	1812	5	-18	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	12.0415945787923	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGAATTACTGAGTGGTT	-18	True	NA	14	True	AATAAA	-20	NA	21158660	21180609	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_21158747_21160977_21161279_21170436_21170606_21174009_21174149_21179474
H1_mix_00030998	chr16	+	1730	5	FSM	ENSG00000011638.11	ENST00000233047.9	1717	5	-13	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	24.4693686064843	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGAGTGGTTTATTTGC	-18	True	NA	21	True	AATAAA	-27	NA	21158660	21180616	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_21158747_21161084_21161279_21170436_21170606_21174009_21174149_21179474
H1_mix_00031002	chr16	+	1817	5	FSM	ENSG00000197006.15	ENST00000396014.8	1817	5	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_4	294.169487710741	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAACAGAAACAAA	34	False	NA	NA	False	NA	NA	NA	21599557	21656119	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_21599899_21612644_21612836_21617864_21618075_21624930_21625116_21655229
H1_mix_00031003	chr16	+	3172	5	FSM	ENSG00000197006.15	ENST00000358154.8	3153	5	-19	0	0	0	multi-exon	FALSE	canonical	3	671	junction_4	148.578893184732	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTCGTGTAAGTGCTTCA	34	False	NA	13	True	AATAAA	-19	NA	21599557	21657471	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_21599899_21612644_21612836_21617864_21618075_21624930_21625116_21655226
H1_mix_00031004	chr16	+	701	3	FSM	ENSG00000197006.15	ENST00000562379.1	701	3	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	463.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAGTGTGGTCAGTCAGG	-16	True	NA	NA	False	NA	NA	NA	21599591	21625114	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_21599899_21617864_21618075_21624930
H1_mix_00031009	chr16	+	1073	4	NIC	ENSG00000185716.12	novel	1359	7	NA	NA	22	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	7.58653778449403	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTTCCATTCCTTTGTT	16	True	NA	13	True	AATAAA	-16	NA	22008132	22087534	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_22008408_22075486_22075700_22085643_22085751_22087056
H1_mix_00031012	chr16	+	2493	20	FSM	ENSG00000058600.16	ENST00000359210.8	2469	20	-24	0	0	0	multi-exon	FALSE	canonical	2	5	junction_19	44.2218030730997	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGTTTAATATTTTCTT	-11	True	NA	34	True	AATAAA	-36	NA	22297408	22334025	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_22297538_22302930_22303005_22305155_22305207_22308147_22308226_22308924_22309041_22309427_22309511_22313619_22313728_22314078_22314129_22315088_22315209_22316600_22316687_22316994_22317040_22317114_22317207_22318825_22318947_22322849_22322932_22324353_22324414_22324502_22324661_22325204_22325267_22325760_22326279_22328509_22328588_22333643
H1_mix_00031020	chr16	+	5708	23	FSM	ENSG00000243716.11	ENST00000415654.5	5708	23	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_15	313.829193028141	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAATACTGCAGTCCT	5088	False	NA	NA	False	AATAAA	-17	NA	22479120	22536513	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_22479132_22480263_22480383_22480853_22480942_22481030_22481133_22481751_22481893_22482443_22482644_22483030_22483228_22483395_22483561_22484661_22484817_22485829_22485973_22486120_22486323_22489205_22489316_22490294_22490443_22490816_22490977_22491706_22491827_22513521_22513601_22513763_22513922_22523819_22523949_22527565_22527666_22527777_22527974_22532059_22532121_22532229_22532266_22533625
H1_mix_00031024	chr16	+	3797	9	FSM	ENSG00000243716.11	ENST00000521555.6	3797	9	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_3	394.06295103067	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCAGTCCTTATGTTAT	15	False	NA	NA	False	AATAAA	-25	NA	22513521	22536521	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_22513611_22513763_22513922_22519137_22519270_22523819_22523949_22527565_22527666_22527777_22527974_22532059_22532121_22532229_22532266_22533625
H1_mix_00031026	chr16	+	6281	3	FSM	ENSG00000243716.11	ENST00000442450.2	852	3	-2764	-2665	1162	0	multi-exon	FALSE	canonical	3	1058	junction_1	31	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACTAACAAAGAATAAA	NA	False	NA	NA	False	AATAAA	-33	NA	22528727	22536477	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_22532121_22532229_22532266_22533625
H1_mix_00031028	chr16	+	733	3	FSM	ENSG00000260136.6	ENST00000570080.1	730	3	-3	0	-3	0	multi-exon	FALSE	canonical	3	9	junction_2	12.5	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTGTTCAAAGGATCCT	NA	False	NA	-5	True	NA	NA	NA	23452754	23457588	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_23453266_23455469_23455531_23457427
H1_mix_00031029	chr16	+	438	2	FSM	ENSG00000260136.6	ENST00000562842.1	438	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATATAGTCTTTTCTCAT	NA	False	NA	13	True	CATAAA	-16	NA	23453006	23457606	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_23453266_23457427
H1_mix_00031035	chr16	+	11115	6	FSM	ENSG00000166847.10_ENSG00000260482.3	ENST00000563998.5	878	6	-136	-10101	-131	0	multi-exon	FALSE	canonical	3	14	junction_5	149.418338901221	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATTTTTCAAAGTCTTC	1833	False	NA	28	True	AATAAA	-31	NA	23641334	23677472	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_23641591_23642954_23643024_23658506_23658626_23661169_23661282_23665625_23665729_23667016
H1_mix_00031036	chr16	+	10954	6	FSM	ENSG00000166847.10	ENST00000300087.7	10954	6	0	0	0	0	multi-exon	TRUE	canonical	3	341	junction_3	24.9158584038359	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATTTTTCAAAGTCTTC	-21	True	NA	28	True	AATAAA	-31	NA	23641465	23677472	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_23641591_23642954_23643024_23658506_23658626_23661169_23661282_23665625_23665729_23667046
H1_mix_00031039	chr16	+	2180	10	FSM	ENSG00000166851.15	ENST00000300093.9	2160	10	-20	0	0	0	multi-exon	TRUE	canonical	3	1524	junction_2	137.598449603669	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTGTATTTCCTGAG	-36	True	NA	28	True	ATTAAA	-16	NA	23678868	23690367	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_23679341_23680083_23680253_23680913_23681059_23682063_23682158_23683869_23684090_23687468_23687625_23688667_23688746_23689237_23689393_23689493_23689677_23689859
H1_mix_00031042	chr16	+	8030	17	FSM	ENSG00000166501.14	ENST00000643927.1	8010	17	-20	0	-20	0	multi-exon	FALSE	canonical	3	84	junction_7	9.27698765763974	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTGTTTATATGTCTTT	-18	True	NA	NA	False	ATTAAA	-19	NA	23835962	24220611	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_23836349_23837374_23837407_23988507_23988591_24032135_24032248_24035418_24035548_24092790_24092948_24094162_24094298_24112972_24113070_24123834_24123982_24154683_24154858_24172269_24172362_24174517_24174581_24180789_24180929_24185110_24185192_24185459_24185568_24191089_24191231_24214657
H1_mix_00031043	chr16	+	2727	17	FSM	ENSG00000166501.14	ENST00000321728.12	2707	17	-20	0	-20	0	multi-exon	FALSE	canonical	2	3	junction_16	27.5969172870812	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTGTTTATATGTCTTT	-18	True	NA	NA	False	ATTAAA	-19	NA	23835962	24220611	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_23836349_23837374_23837407_23988507_23988591_24032135_24032248_24035418_24035548_24092790_24092948_24094162_24094298_24112972_24113070_24123834_24123982_24154683_24154858_24172269_24172362_24174517_24174581_24180789_24180929_24185110_24185192_24185459_24185568_24191089_24191231_24219960
H1_mix_00031044	chr16	+	699	7	FSM	ENSG00000122257.20	ENST00000568015.5	695	7	-4	0	-4	0	multi-exon	FALSE	canonical	0	0	junction_1	59.124163137136	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGTTTCCGTTGTGGTA	5	True	NA	NA	False	AAGAAA	-27	NA	24539551	24555859	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_24539760_24540611_24540793_24546162_24546263_24548944_24548982_24553512_24553558_24555614_24555704_24555820
H1_mix_00031046	chr16	+	2050	8	ISM	ENSG00000122257.20	ENST00000567686.5	1138	10	1840	1860	-4	0	internal_fragment	FALSE	canonical	3	134	junction_3	16.034401791658	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTAAGTAGTGAGAAGTCT	5	True	NA	28	True	AATAAA	-36	NA	24539551	24559805	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_24540793_24546162_24546263_24548944_24548982_24553512_24553558_24555614_24555704_24555820_24555918_24556307_24556448_24559504
H1_mix_00031047	chr16	+	8348	24	FSM	ENSG00000090905.19	ENST00000315183.11	8303	24	-45	0	-1	0	multi-exon	FALSE	canonical	3	31	junction_7	84.5080951592687	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAGTGGTTTGGATCTT	-6	True	NA	26	True	AATAAA	-19	NA	24729649	24826221	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_24729847_24730252_24730301_24750725_24750814_24758338_24758361_24776932_24777359_24789231_24791818_24793472_24793650_24794543_24794720_24795906_24795940_24797489_24797571_24797914_24797967_24804176_24804320_24805013_24805152_24805604_24805734_24806205_24806284_24806573_24806785_24809349_24809482_24815146_24815306_24816815_24816957_24818592_24818701_24820138_24820361_24822076_24822148_24822873_24823014_24823431
H1_mix_00031048	chr16	+	8069	22	NIC	ENSG00000090905.19	novel	8303	24	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	31	junction_7	86.9010958130836	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAGTGGTTTGGATCTT	-6	True	NA	26	True	AATAAA	-19	NA	24729649	24826221	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_24729847_24730252_24730301_24750725_24750814_24758338_24758361_24776932_24777359_24789231_24791818_24794543_24794720_24797489_24797571_24797914_24797967_24804176_24804320_24805013_24805152_24805673_24805734_24806205_24806284_24806573_24806785_24809349_24809482_24815146_24815306_24816815_24816957_24818592_24818701_24820138_24820361_24822076_24822148_24822873_24823014_24823431
H1_mix_00031049	chr16	+	8126	23	NIC	ENSG00000090905.19	novel	8303	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	145	junction_4	68.5793411535708	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAGTGGTTTGGATCTT	-20	True	NA	26	True	AATAAA	-19	NA	24729694	24826221	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_24729847_24730252_24730301_24750725_24750814_24758338_24758361_24776932_24777359_24789231_24791818_24794543_24794720_24795906_24795940_24797489_24797571_24797914_24797967_24804176_24804320_24805013_24805152_24805604_24805734_24806205_24806284_24806573_24806785_24809349_24809482_24815146_24815306_24816815_24816957_24818592_24818701_24820138_24820361_24822076_24822148_24822873_24823014_24823431
H1_mix_00031050	chr16	+	8054	23	NIC	ENSG00000090905.19	novel	8303	24	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_12	77.4914551407748	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAGTGGTTTGGATCTT	-17	True	NA	26	True	AATAAA	-19	NA	24729697	24826221	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_24729847_24730252_24730301_24750725_24750814_24758338_24758361_24776932_24777359_24789231_24791818_24794543_24794720_24795906_24795940_24797489_24797571_24797914_24797967_24804176_24804320_24805013_24805152_24805673_24805734_24806205_24806284_24806573_24806785_24809349_24809482_24815146_24815306_24816815_24816957_24818592_24818701_24820138_24820361_24822076_24822148_24822873_24823014_24823431
H1_mix_00031055	chr16	+	1063	1	FSM	ENSG00000262587.3	ENST00000619106.1	1032	1	19	-50	19	48	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGGCTTAAAAAACAGGG	23	False	NA	61	True	NA	NA	NA	25031762	25032825	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_25031800_25032800
H1_mix_00031056	chr16	+	1236	9	FSM	ENSG00000205629.12	ENST00000380966.8	989	9	-39	-208	-35	0	multi-exon	FALSE	canonical	0	0	junction_2	256.903161473346	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGTTGGACCTCTGC	NA	False	NA	31	True	AATAAA	-19	NA	25111695	25178231	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_25111997_25128474_25128567_25132401_25132524_25140170_25140248_25164597_25164719_25169111_25169214_25170713_25170806_25174936_25175035_25178000
H1_mix_00031058	chr16	+	1539	12	FSM	ENSG00000205629.12	ENST00000380962.9	1529	12	-10	0	-10	0	multi-exon	FALSE	non_canonical	0	0	junction_2	291.248495189955	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGTTGGACCTCTGC	-23	True	NA	31	True	AATAAA	-19	NA	25111720	25178231	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_25111997_25125963_25126127_25128474_25128567_25132401_25132524_25140170_25140248_25151553_25151616_25161101_25161205_25164597_25164719_25169111_25169214_25170713_25170806_25174936_25175035_25178000
H1_mix_00031059	chr16	+	557	4	FSM	ENSG00000205629.12	ENST00000570981.1	612	4	0	55	0	-55	multi-exon	FALSE	canonical	0	0	junction_2	261.72037665332	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCACAGGCTCTATGGCTC	103	False	NA	7	True	AATATA	-16	NA	25111931	25140448	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_25111997_25128474_25128567_25132401_25132524_25140170
H1_mix_00031064	chr16	+	3575	10	FSM	ENSG00000077238.14	ENST00000543915.6	3539	10	-37	1	-34	0	multi-exon	FALSE	canonical	3	63	junction_1	15.1249936230983	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTTATGTATTAACCAA	-45	True	NA	32	True	AATAAA	-17	NA	27313888	27364777	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_27314021_27340185_27340274_27342120_27342260_27344868_27345021_27346466_27346619_27352539_27352697_27355807_27355908_27358915_27358995_27360765_27360816_27362251
H1_mix_00031065	chr16	+	3624	11	FSM	ENSG00000077238.14	ENST00000395762.7	3624	11	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	13.9413055342748	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTATGTATTAACCAAA	40	True	NA	33	True	AATAAA	-18	NA	27313973	27364778	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_27314021_27330065_27330199_27340185_27340274_27342120_27342260_27344868_27345021_27346466_27346619_27352539_27352697_27355807_27355908_27358915_27358995_27360765_27360816_27362251
H1_mix_00031071	chr16	+	782	6	FSM	ENSG00000047578.14	ENST00000565672.5	767	6	-15	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	17.1067238242745	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGGACGCTCTTCTCCAG	NA	False	NA	NA	False	NA	NA	NA	27573906	27677931	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_27573957_27628660_27628831_27631064_27631163_27648603_27648736_27654607_27654737_27677728
H1_mix_00031072	chr16	+	1539	4	FSM	ENSG00000188322.8	ENST00000671413.3	1539	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	310.33995696476	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGCCTCCGCCGCCCTCGG	518	False	NA	NA	False	NA	NA	NA	28259245	28320921	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28259503_28317384_28317618_28318994_28319198_28320075
H1_mix_00031073	chr16	+	4986	4	FSM	ENSG00000188322.8	ENST00000341901.5	4986	4	0	0	0	0	multi-exon	FALSE	canonical	3	565	junction_1	73.5436378394941	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGGGTGGCTGTCTTTT	11	True	NA	19	True	AATAAA	-20	NA	28292524	28323849	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28293301_28317384_28317618_28318994_28319198_28320075
H1_mix_00031074	chr16	+	4962	5	NNC	ENSG00000188322.8	novel	4986	4	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	275.076807455663	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGGGTGGCTGTCTTTT	11	True	NA	19	True	AATAAA	-20	NA	28292524	28323849	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_28293301_28317384_28317618_28318994_28319198_28320075_28322918_28322941
H1_mix_00031075	chr16	+	4954	5	NNC	ENSG00000188322.8	novel	4986	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	275.076807455663	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGGGTGGCTGTCTTTT	11	True	NA	19	True	AATAAA	-20	NA	28292524	28323849	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_28293301_28317384_28317618_28318994_28319198_28320075_28322920_28322951
H1_mix_00031078	chr16	+	3128	21	FSM	ENSG00000184110.15	ENST00000566501.5	3128	21	0	0	0	0	multi-exon	TRUE	canonical	2	72	junction_1	892.055906319778	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGATTGCTTGTTGC	NA	False	NA	NA	False	ACTAAA	-18	NA	28688557	28735598	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28688829_28711656_28711788_28713700_28713767_28713908_28714099_28714320_28714447_28714635_28714691_28714818_28714929_28715306_28715435_28723163_28723324_28723447_28723552_28724321_28724464_28724657_28724784_28724918_28725013_28726604_28726796_28727020_28727246_28731828_28732193_28734519_28734680_28734777_28734844_28734931_28735020_28735172_28735336_28735430
H1_mix_00031079	chr16	+	2951	21	FSM	ENSG00000184110.15	ENST00000331666.11	2910	21	-47	6	0	0	multi-exon	FALSE	canonical	3	3157	junction_1	369.781459107944	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGTTCTGGTTGATTG	NA	False	NA	NA	False	ACTAAA	-10	NA	28711416	28735590	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28711519_28711656_28711788_28713700_28713767_28713908_28714099_28714320_28714447_28714635_28714691_28714818_28714929_28715306_28715435_28723163_28723324_28723447_28723552_28724321_28724464_28724657_28724784_28724918_28725013_28726604_28726796_28727020_28727246_28731828_28732193_28734519_28734680_28734777_28734844_28734931_28735020_28735172_28735336_28735430
H1_mix_00031081	chr16	+	2987	20	FSM	ENSG00000184110.15	ENST00000566866.5	2986	20	0	-1	0	0	multi-exon	FALSE	canonical	3	3269	junction_7	344.966857776206	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGATTGCTTGTTGC	33	False	NA	NA	False	ACTAAA	-18	NA	28711526	28735598	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28711788_28713700_28713767_28713908_28714099_28714320_28714447_28714635_28714691_28714818_28714929_28715306_28715435_28723163_28723324_28723447_28723552_28724321_28724464_28724657_28724784_28724918_28725013_28726604_28726796_28727020_28727246_28731828_28732193_28734519_28734680_28734777_28734844_28734931_28735020_28735172_28735336_28735430
H1_mix_00031082	chr16	+	3957	13	FSM	ENSG00000184110.15	ENST00000565932.5	3957	13	0	0	0	0	multi-exon	FALSE	canonical	3	3510	junction_2	346.39280047689	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTGGTTGATTGCTTGT	9761	False	NA	NA	False	ACTAAA	-15	NA	28721254	28735595	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28723324_28723447_28723552_28724321_28724464_28724657_28724784_28724918_28725013_28726604_28726796_28727020_28727246_28731828_28732193_28734519_28734680_28734777_28734844_28734931_28735020_28735172_28735336_28735430
H1_mix_00031084	chr16	+	4115	24	NIC	ENSG00000168488.19	novel	3807	23	NA	NA	-247	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_23	192.366154091814	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAACCTGCCTGGAGTTTC	39	False	NA	19	True	AATAAA	-26	NA	28822751	28837232	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_28823559_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836123_28836448_28836486_28836747
H1_mix_00031085	chr16	+	4342	23	NIC	ENSG00000168488.19	novel	3635	23	NA	NA	-179	-34	intron_retention	FALSE	canonical	3	216	junction_22	129.482057852759	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTACATAAAAATATTAAAA	35	False	NA	-32	True	NA	NA	NA	28822819	28837181	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_28823559_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836486_28836727
H1_mix_00031086	chr16	+	4456	22	FSM	ENSG00000168488.19	ENST00000336783.9	4456	22	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_1	90.5699514175272	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAACCTGCCTGGAGTTTC	-66	True	NA	19	True	AATAAA	-26	NA	28822998	28837232	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28823559_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932
H1_mix_00031087	chr16	+	4574	21	FSM	ENSG00000168488.19	ENST00000563314.5	4574	21	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_1	92.1847465690501	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGAGTTTCCTCCT	-30	True	NA	24	True	AATAAA	-31	NA	28823034	28837237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28823559_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835759_28835932
H1_mix_00031088	chr16	+	3820	23	FSM	ENSG00000168488.19	ENST00000340394.12	3807	23	-13	0	0	0	multi-exon	FALSE	canonical	3	197	junction_22	132.398979110194	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGAGTTTCCTCCT	-30	True	NA	24	True	AATAAA	-31	NA	28823034	28837237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28823559_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836123_28836727
H1_mix_00031089	chr16	+	3788	23	FSM	ENSG00000168488.19	ENST00000325215.10	3788	23	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_22	163.63510731841	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAACCTGCCTGGAGTTTC	28	True	NA	19	True	AATAAA	-26	NA	28823092	28837232	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28823559_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836177_28836750
H1_mix_00031090	chr16	+	3739	23	FSM	ENSG00000168488.19	ENST00000382686.8	3739	23	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_22	151.913640375812	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGAGTTTCCTCCT	28	True	NA	24	True	AATAAA	-31	NA	28823092	28837237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28823559_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836123_28836750
H1_mix_00031091	chr16	+	3894	24	NIC	ENSG00000168488.19	novel	3981	24	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_23	188.762009971068	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAACCTGCCTGGAGTTTC	31	True	NA	19	True	AATAAA	-26	NA	28823095	28837232	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_28823559_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836123_28836325_28836486_28836747
H1_mix_00031092	chr16	+	3635	23	FSM	ENSG00000168488.19	ENST00000570200.5	3635	23	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_22	161.189797525917	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAATTTTAAACTAACTT	13	True	NA	2	True	AATAAA	-9	NA	28823251	28837215	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28823559_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836177_28836727
H1_mix_00031093	chr16	+	3608	24	NIC	ENSG00000168488.19	novel	3788	23	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_23	190.744962795241	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAACCTGCCTGGAGTTTC	17	True	NA	19	True	AATAAA	-26	NA	28823255	28837232	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_28823559_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836123_28836448_28836486_28836750
H1_mix_00031095	chr16	+	3828	23	NIC	ENSG00000168488.19	novel	3264	15	NA	NA	-78	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_22	178.49902770761	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAACCTGCCTGGAGTTTC	554	False	NA	19	True	AATAAA	-26	NA	28824059	28837232	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_28824543_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836177_28836727
H1_mix_00031096	chr16	+	4299	22	NIC	ENSG00000168488.19	novel	3264	15	NA	NA	2	0	intron_retention	FALSE	canonical	3	187	junction_1	121.915233925209	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAACCTGCCTGGAGTTTC	12	False	NA	19	True	AATAAA	-26	NA	28824139	28837232	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_28824543_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932
H1_mix_00031097	chr16	+	3673	23	NIC	ENSG00000168488.19	novel	3264	15	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_20	208.082871483836	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAACCTGCCTGGAGTTTC	13	False	NA	19	True	AATAAA	-26	NA	28824140	28837232	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_28824543_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835545_28835759_28835932_28836123_28836750
H1_mix_00031098	chr16	+	3735	23	NIC	ENSG00000168488.19	novel	3264	15	NA	NA	-79	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_22	170.287026774218	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAATTTTAAACTAACTT	553	False	NA	2	True	AATAAA	-9	NA	28824058	28837215	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_28824543_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836123_28836750
H1_mix_00031101	chr16	+	3321	23	NIC	ENSG00000168488.19	novel	3264	15	NA	NA	42	-3	combination_of_known_junctions	FALSE	canonical	3	187	junction_1	153.423150870853	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAATTTTAAACTAA	17	True	NA	-1	True	AATAAA	-6	NA	28824492	28837212	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_28824543_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836123_28836727
H1_mix_00031102	chr16	+	3558	24	NIC	ENSG00000168488.19	novel	3264	15	NA	NA	42	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_22	224.133627101628	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAACCTGCCTGGAGTTTC	17	True	NA	19	True	AATAAA	-26	NA	28824492	28837232	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_28824543_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835545_28835759_28835932_28836177_28836325_28836486_28836727
H1_mix_00031103	chr16	+	3420	23	NIC	ENSG00000168488.19	novel	3264	15	NA	NA	82	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	176.127401531528	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAACCTGCCTGGAGTTTC	11	False	NA	19	True	AATAAA	-26	NA	28824532	28837232	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_28824662_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836123_28836727
H1_mix_00031105	chr16	+	3457	16	NIC	ENSG00000168488.19	novel	4456	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	61	junction_14	170.647577057383	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAACCTGCCTGGAGTTTC	2456	False	NA	19	True	AATAAA	-26	NA	28829400	28837232	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835545_28835759_28835932
H1_mix_00031106	chr16	+	2880	18	NIC	ENSG00000168488.19	novel	3807	23	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	108	junction_16	181.801043388542	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAACCTGCCTGGAGTTTC	2462	False	NA	19	True	AATAAA	-26	NA	28829406	28837232	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836123_28836448_28836486_28836727
H1_mix_00031107	chr16	+	2988	18	NIC	ENSG00000168488.19	novel	3981	24	NA	NA	29	0	combination_of_known_splicesites	FALSE	canonical	3	61	junction_14	238.700678341789	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAACCTGCCTGGAGTTTC	2485	False	NA	19	True	AATAAA	-26	NA	28829429	28837232	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835545_28835759_28835932_28836123_28836325_28836491_28836727
H1_mix_00031109	chr16	+	1926	8	FSM	ENSG00000168488.19	ENST00000562583.5	1933	8	0	7	0	-2	multi-exon	FALSE	canonical	3	216	junction_7	185.286980940708	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTAACCTGCCTGGAGTT	800	False	NA	17	True	AATAAA	-24	NA	28834064	28837230	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836486_28836727
H1_mix_00031110	chr16	+	1725	9	NIC	ENSG00000168488.19	novel	1933	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	140	junction_7	242.272283546839	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAACCTGCCTGGAGTTTC	800	False	NA	19	True	AATAAA	-26	NA	28834064	28837232	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836123_28836325_28836486_28836727
H1_mix_00031112	chr16	+	1505	8	NIC	ENSG00000168488.19	novel	3807	23	NA	NA	63	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_5	282.159746329946	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAACCTGCCTGGAGTTTC	863	False	NA	19	True	AATAAA	-26	NA	28834127	28837232	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835545_28835759_28835932_28836123_28836727
H1_mix_00031115	chr16	+	3033	10	FSM	ENSG00000178188.15	ENST00000359285.9	3033	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_8	37.1227526650718	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCGTGATGGCTATGGCCA	6	True	NA	21	True	AATAAA	-22	NA	28863804	28874205	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28863946_28866011_28867034_28867330_28867433_28869005_28869098_28869207_28869384_28871779_28871984_28872189_28872402_28872533_28872759_28873169_28873270_28873446
H1_mix_00031116	chr16	+	2976	10	NIC	ENSG00000178188.15	novel	3033	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	68	junction_1	21.8756305023774	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTATCGTGATGGCTATG	6	True	NA	17	True	AATAAA	-18	NA	28863804	28874201	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_28863946_28866011_28867034_28867330_28867433_28869005_28869098_28869207_28869384_28871779_28871984_28872189_28872402_28872533_28872706_28873169_28873270_28873446
H1_mix_00031124	chr16	+	2211	12	FSM	ENSG00000169682.18	ENST00000311008.16	2205	12	-9	3	-3	0	multi-exon	FALSE	canonical	3	502	junction_6	74.0115023448304	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCCAGGTGCCTGCTCT	-13	True	NA	10	True	AATAAA	-11	NA	28974768	28984540	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404_28979472_28981469_28981616_28981900_28982057_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
H1_mix_00031125	chr16	+	2124	13	FSM	ENSG00000169682.18	ENST00000323081.12	2102	13	-25	3	-3	0	multi-exon	FALSE	canonical	3	140	junction_1	155.412957953962	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCCAGGTGCCTGCTCT	-13	True	NA	10	True	AATAAA	-11	NA	28974768	28984540	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28975101_28975187_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404_28979472_28981469_28981616_28981900_28982057_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
H1_mix_00031126	chr16	+	1818	12	NIC	ENSG00000169682.18	novel	1979	13	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_7	218.201476387124	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCCAGGTGCCTGCTCT	-13	True	NA	10	True	AATAAA	-11	NA	28974768	28984540	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_28974864_28975100_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404_28979472_28981469_28981616_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
H1_mix_00031127	chr16	+	1982	13	FSM	ENSG00000169682.18	ENST00000565975.5	1979	13	-3	0	-3	0	multi-exon	FALSE	canonical	3	173	junction_1	147.35416519393	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCCTGCTCTCGTCTTTC	-13	True	NA	18	True	AATAAA	-19	NA	28974768	28984548	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28974864_28975100_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404_28979472_28981469_28981616_28981900_28982057_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
H1_mix_00031128	chr16	+	2034	11	FSM	ENSG00000169682.18	ENST00000334536.12	2027	11	-7	0	0	0	multi-exon	FALSE	canonical	3	63	junction_6	187.77031181739	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGGTGCCTGCTCTCGTC	12	True	NA	14	True	AATAAA	-15	NA	28974793	28984544	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404_28979472_28981469_28981616_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
H1_mix_00031129	chr16	+	2082	13	NIC	ENSG00000169682.18	novel	2102	13	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	3	59	junction_1	175.634563796537	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGACCCCAGGTGCCTGCTC	32	False	NA	9	True	AATAAA	-10	NA	28974813	28984539	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_28975101_28975183_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404_28979472_28981469_28981616_28981900_28982057_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
H1_mix_00031130	chr16	+	1672	12	FSM	ENSG00000213658.13	ENST00000395456.7	1671	12	-3	2	0	-1	multi-exon	FALSE	canonical	3	10	junction_1	3.47363148628051	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTCTAAGTAACTGAAAAAG	-3	True	NA	26	True	AATAAA	-17	NA	28985048	28990782	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28985518_28985712_28985741_28985853_28985889_28986134_28986217_28986381_28986447_28986539_28986570_28986656_28986715_28986798_28986894_28989526_28989590_28989773_28989840_28989932_28990020_28990188
H1_mix_00031133	chr16	+	551	4	Antisense	novelGene_ENSG00000254206.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGAGCAGACACTCGAGA	NA	False	NA	NA	False	NA	NA	NA	29381478	29384114	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr16_+_29381787_29382933_29383003_29383883_29384022_29384078
H1_mix_00031134	chr16	+	1165	6	FSM	ENSG00000181625.17	ENST00000330181.9	1165	6	0	0	0	0	multi-exon	FALSE	canonical	3	709	junction_2	128.219499297104	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGCCTTATGGTGGATGC	-1	True	NA	NA	False	AATAAA	-14	NA	29454500	29458219	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29454931_29455397_29455450_29455543_29455886_29457631_29457760_29457927_29458016_29458094
H1_mix_00031135	chr16	+	1558	5	FSM	ENSG00000181625.17	ENST00000565219.1	1558	5	0	0	0	0	multi-exon	FALSE	canonical	3	709	junction_1	137.356061023895	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACTTGAGTACAATAAAAAG	16	False	NA	NA	False	NA	NA	NA	29454544	29458189	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29455450_29455543_29455886_29457631_29457760_29457927_29458016_29458094
H1_mix_00031137	chr16	+	3934	7	ISM	ENSG00000260280.5	ENST00000395400.4	2380	9	2280	-300	2280	0	3prime_fragment	FALSE	canonical	3	215	junction_1	13.6106575888162	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTGTGTTCATGTAGAG	2290	False	NA	8	True	AATAAA	-16	NA	29458727	29464963	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_29461534_29461637_29461764_29461852_29461951_29463344_29463472_29463566_29463662_29464159_29464341_29464462
H1_mix_00031138	chr16	+	1356	8	FSM	ENSG00000213648.11	ENST00000360423.12	1356	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	77.8357768848317	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTCATGTAGAGCCT	28	False	NA	11	True	AATAAA	-19	NA	29459912	29464966	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29459986_29461381_29461534_29461637_29461764_29461852_29461951_29463344_29463472_29463566_29463662_29464159_29464341_29464462
H1_mix_00031143	chr16	+	2421	4	FSM	ENSG00000103485.19	ENST00000395384.9	2200	4	-221	0	-49	0	multi-exon	FALSE	canonical	3	610	junction_2	49.8285950924656	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGTGCCTGAGGAGTTTT	NA	False	NA	17	True	AATAAA	-17	NA	29678958	29698699	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29679211_29694663_29695200_29696995_29697128_29697198
H1_mix_00031144	chr16	+	2177	1	FSM	ENSG00000103485.19	ENST00000564967.1	2199	1	23	-1	23	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGGAAAGAAAGAGAGAAAG	NA	False	NA	NA	False	AAGAAA	-3	NA	29695819	29697996	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29695800_29698000
H1_mix_00031152	chr16	+	1568	2	ISM	ENSG00000079616.14	ENST00000568312.2	1001	6	631	-1	631	0	intron_retention	FALSE	canonical	3	1570	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGTAAATACAGTTTTT	4651	False	NA	-3	True	NA	NA	NA	29803399	29805356	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_29803609_29803997
H1_mix_00031158	chr16	+	1464	3	FSM	ENSG00000103495.15	ENST00000568544.5	1464	3	0	0	0	0	multi-exon	FALSE	canonical	3	739	junction_2	211.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGCGGACCCCATTACAATA	240	False	NA	-26	True	NA	NA	NA	29808050	29811125	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29808294_29808569_29808742_29810076
H1_mix_00031160	chr16	+	1470	3	FSM	ENSG00000167371.21	ENST00000567659.3	1470	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	24	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGCCCCCACCCCTAAG	-5	True	NA	NA	False	NA	NA	NA	29812190	29814725	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29812324_29812989_29813934_29814332
H1_mix_00031161	chr16	+	2867	2	FSM	ENSG00000167371.21	ENST00000647876.1	2867	2	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	0	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTACAACGCGGTTCGGA	1442	False	NA	-30	True	NA	NA	NA	29812149	29815682	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29812324_29812989
H1_mix_00031162	chr16	+	6764	5	Fusion	ENSG00000280893.1_ENSG00000013364.19_ENSG00000280607.1	novel	2252	6	NA	NA	-68	2393	intron_retention	FALSE	canonical	3	76	junction_2	386.873041190518	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTGAAGTTGTGTCCT	-3	True	NA	17	True	NA	NA	NA	29812192	29822485	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr16_+_29812324_29812989_29813934_29814332_29817008_29817209_29817293_29819554
H1_mix_00031163	chr16	+	3874	3	FSM	ENSG00000280789.2	ENST00000320330.8	3874	3	0	0	0	0	multi-exon	FALSE	canonical	3	872	junction_1	1	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAAGTTGTGTCCTTGTT	5	True	NA	21	True	NA	NA	NA	29816151	29822489	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29817008_29817209_29817293_29819554
H1_mix_00031165	chr16	+	726	6	FSM	ENSG00000214725.9	ENST00000565014.5	729	6	0	3	0	2	multi-exon	FALSE	canonical	1	2	junction_1	1.78885438199983	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCATGTGTGGTTTCTCTG	NA	False	NA	NA	False	AATAAA	-18	NA	29863592	29868050	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29863731_29864303_29864392_29864727_29864876_29865159_29865238_29865355_29865443_29867863
H1_mix_00031166	chr16	+	1296	4	FSM	ENSG00000174939.11	ENST00000483405.5	1115	4	-181	0	-177	0	multi-exon	FALSE	canonical	3	27	junction_1	36.4630711207319	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCGACTACTTCCTTCGC	NA	False	NA	10	True	TATAAA	-19	NA	29900197	29906056	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29900742_29901551_29901921_29904851_29904966_29905787
H1_mix_00031167	chr16	+	1001	6	NIC	ENSG00000174939.11	novel	1732	5	NA	NA	-12	-9	combination_of_known_junctions	FALSE	canonical	1	4	junction_5	43.0627449194777	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCCTGGACTGGATATTA	-14	True	NA	-22	True	AAAACA	-31	NA	29900362	29919623	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_29900567_29901551_29901921_29904851_29904966_29905787_29905960_29906078_29906128_29919530
H1_mix_00031171	chr16	+	1950	5	FSM	ENSG00000149932.17	ENST00000566848.5	1292	5	-658	0	-60	0	multi-exon	FALSE	canonical	3	641	junction_4	141.432625302651	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGGGGGAAAATAAAAAGCT	NA	False	NA	-16	True	AAAAAG	-15	NA	29962018	29973018	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29963309_29963399_29963590_29968024_29968255_29971407_29971579_29972949
H1_mix_00031172	chr16	+	929	6	NIC	ENSG00000149932.17	novel	946	6	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	285	junction_1	263.457321021831	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCGTGTATGGTGTTTAT	13	True	NA	14	True	AATAAA	-16	NA	29962092	29973048	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_29962133_29963109_29963309_29963399_29963590_29968024_29968255_29971407_29971579_29972949
H1_mix_00031173	chr16	+	1013	6	NNC	ENSG00000149932.17	novel	946	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	361.177850926659	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGGGGGAAAATAAAAAGCT	-1	True	NA	-16	True	AAAAAG	-15	NA	29962078	29973018	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_29962233_29963109_29963309_29963399_29963590_29968024_29968255_29971407_29971579_29972949
H1_mix_00031174	chr16	+	976	6	FSM	ENSG00000149932.17	ENST00000279396.11	946	6	-60	30	-60	0	multi-exon	FALSE	canonical	3	248	junction_1	276.530938594581	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGGGGGAAAATAAAAAGCT	NA	False	NA	-16	True	AAAAAG	-15	NA	29962018	29973018	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29962133_29963106_29963309_29963399_29963590_29968024_29968255_29971407_29971579_29972949
H1_mix_00031175	chr16	+	1249	5	FSM	ENSG00000149932.17	ENST00000561899.6	1249	5	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	304.19771531029	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTTTGGTTTTACTTAT	24	True	NA	-10	True	NA	NA	NA	29962103	29972005	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29962133_29963106_29963309_29963399_29963590_29968024_29968255_29971407
H1_mix_00031176	chr16	+	4949	16	FSM	ENSG00000149930.18	ENST00000308893.9	4937	16	-12	0	-12	0	multi-exon	FALSE	canonical	3	110	junction_10	15.5283253729721	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCCTTTGGCCCAGGCT	-10	True	NA	14	True	AATAAA	-15	NA	29973855	29988393	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29974649_29977737_29977905_29978088_29978161_29978251_29978354_29978798_29978845_29978973_29979071_29979194_29979309_29979416_29979509_29981660_29981755_29981858_29981941_29982733_29982902_29983071_29983333_29983502_29983665_29985212_29985579_29985657_29985862_29986264
H1_mix_00031179	chr16	+	2289	2	FSM	ENSG00000149930.18	ENST00000570844.1	1721	2	-17	-551	-17	0	multi-exon	FALSE	canonical	3	81	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGACTCACCCTTCTG	6227	False	NA	31	True	AATAAA	-21	NA	29989892	29992261	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29990967_29991046
H1_mix_00031181	chr16	+	1157	7	FSM	ENSG00000169592.15	ENST00000563197.6	1154	7	-3	0	0	0	multi-exon	FALSE	canonical	3	147	junction_6	41.4192655120242	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTTTGTCCTTTTTT	2	True	NA	27	True	ATTAAA	-15	NA	29996237	30005791	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29996392_29996546_29996618_29996807_29996861_30000757_30000837_30000928_30001041_30001413_30001531_30005220
H1_mix_00031182	chr16	+	1163	8	NIC	ENSG00000169592.15	novel	1926	11	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_7	90.3749558952104	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCTTTAAAAGGGCAGCT	12	True	NA	-47	True	NA	NA	NA	29996247	30005717	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_29996392_29996546_29996618_29996807_29996861_30000757_30000837_30000928_30001041_30001413_30001531_30004567_30004658_30005220
H1_mix_00031186	chr16	+	1380	11	FSM	ENSG00000149925.22	ENST00000569545.5	1359	11	-21	0	0	0	multi-exon	FALSE	canonical	1	8	junction_2	2679.16664095386	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCACTCTTGAAGAGGAG	-7	True	NA	NA	False	NA	NA	NA	30064163	30070257	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30064249_30064423_30064506_30065875_30065928_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068979_30069305_30069390_30069498_30069674_30069829_30070030_30070116
H1_mix_00031187	chr16	+	1540	9	FSM	ENSG00000149925.22	ENST00000563060.6	1550	9	10	0	10	0	multi-exon	FALSE	canonical	3	1337	junction_1	1942.36762338518	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGCCGTCCGTGTCTTGT	72	False	NA	22	True	AATAAA	-18	NA	30064283	30070414	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30064506_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068979_30069305_30069390_30069498_30069674_30069829_30070030_30070116
H1_mix_00031188	chr16	+	2509	7	FSM	ENSG00000149925.22	ENST00000564521.6	2534	7	0	25	0	15	multi-exon	FALSE	canonical	3	1337	junction_1	2132.2004869774	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGTCTAATGCAGGGGA	2	True	NA	40	True	AATAAA	-36	NA	30064433	30070432	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30064506_30067233_30067367_30067449_30068979_30069305_30069390_30069498_30069674_30069829_30070030_30070116
H1_mix_00031189	chr16	+	1603	9	FSM	ENSG00000149925.22	ENST00000412304.6	1603	9	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	2362.91697047844	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTCGGCCGTCCGTGTCT	27	False	NA	19	True	AATAAA	-15	NA	30064496	30070411	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30064785_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068979_30069305_30069390_30069498_30069674_30069829_30070030_30070116
H1_mix_00031190	chr16	+	1529	9	FSM	ENSG00000149925.22	ENST00000643777.4	1486	9	0	-43	0	0	multi-exon	FALSE	canonical	3	5055	junction_1	745.047219560613	2080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGGAGGTAGCAGAGCCCA	-2	True	NA	65	True	NA	NA	NA	30065759	30070457	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30065928_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068979_30069305_30069390_30069498_30069674_30069829_30070030_30070116
H1_mix_00031193	chr16	+	1348	9	NIC	ENSG00000149923.14	novel	1402	9	NA	NA	-7	-9	combination_of_known_junctions	FALSE	canonical	3	616	junction_1	851.396637516851	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTGTTTTTAGATAAAAA	-17	True	NA	41	True	NA	NA	NA	30075986	30085309	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_30076101_30076314_30076476_30081258_30081311_30082483_30082535_30082745_30082848_30083393_30083568_30083654_30083782_30084665_30084856_30084932
H1_mix_00031194	chr16	+	1149	4	FSM	ENSG00000149923.14	ENST00000564966.5	1122	4	-27	0	2	0	multi-exon	FALSE	canonical	3	231	junction_2	1312.33032765721	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCCAGCCCAGGGCTCC	-24	True	NA	NA	False	NA	NA	NA	30075979	30083567	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30076095_30076314_30076476_30082483_30082535_30082745
H1_mix_00031195	chr16	+	959	8	FSM	ENSG00000149923.14	ENST00000562664.5	941	8	-18	0	0	0	multi-exon	FALSE	canonical	3	521	junction_4	922.03740682894	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCCGACTACTTCCTGTG	-4	True	NA	NA	False	NA	NA	NA	30075999	30085041	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30076095_30076314_30076476_30081258_30081311_30082483_30082535_30083393_30083568_30083654_30083782_30084665_30084856_30084932
H1_mix_00031196	chr16	+	1454	8	FSM	ENSG00000149923.14	ENST00000563200.5	1447	8	-7	0	0	0	multi-exon	FALSE	canonical	3	2228	junction_1	367.517540883619	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATTCTAATAAAAGAAG	-4	True	NA	-19	True	GATAAA	-21	NA	30075999	30085347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30076095_30076314_30076476_30081258_30081311_30082483_30082535_30082745_30082848_30083393_30083782_30084665_30084856_30084932
H1_mix_00031197	chr16	+	1324	8	FSM	ENSG00000149923.14	ENST00000627746.2	1301	8	-23	0	0	0	multi-exon	FALSE	canonical	3	231	junction_2	1035.68969428934	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAGAAGAAAAATGGT	-4	True	NA	-10	True	GATAAA	-30	NA	30075999	30085356	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30076095_30076314_30076476_30082483_30082535_30082745_30082848_30083393_30083568_30083654_30083782_30084665_30084856_30084932
H1_mix_00031199	chr16	+	1333	8	FSM	ENSG00000149923.14	ENST00000561610.1	1333	8	0	0	0	0	multi-exon	FALSE	canonical	3	2947	junction_4	174.856559289409	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAGATAAAAATTTTGAGAA	221	False	NA	-48	True	NA	NA	NA	30076224	30085318	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30076476_30081258_30081311_30082483_30082535_30082745_30082848_30083393_30083568_30083654_30083782_30084665_30084856_30084932
H1_mix_00031201	chr16	+	709	2	FSM	ENSG00000250616.3	ENST00000693600.1	718	2	9	0	9	0	multi-exon	FALSE	canonical	3	187	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTCAGTGCTGGTTTT	0	True	NA	30	True	AGTAAA	-18	NA	30097083	30104116	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30097420_30103743
H1_mix_00031205	chr16	+	1839	10	ISM	ENSG00000102879.16	ENST00000219150.10	1623	11	60	7	41	-6	intron_retention	TRUE	canonical	3	62	junction_7	9.37424894110864	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTACCTCCCAGACTCT	47	False	NA	NA	False	AATAAA	-13	NA	30183661	30189069	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_30183726_30185208_30185408_30186597_30186721_30186815_30186946_30187038_30187224_30187381_30187502_30187724_30187830_30187941_30188088_30188191_30188250_30188360
H1_mix_00031206	chr16	+	1570	5	FSM	ENSG00000132207.18	ENST00000565081.1	1558	5	-12	0	0	0	multi-exon	FALSE	canonical	3	729	junction_1	129.159542814304	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACTTGAGTACAATAAAAAG	4	False	NA	NA	False	NA	NA	NA	30193874	30197531	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30194792_30194885_30195228_30196973_30197102_30197269_30197358_30197436
H1_mix_00031210	chr16	+	2380	9	FSM	ENSG00000213599.10	ENST00000566712.2	2380	9	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_2	287.62038240535	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGGCTCATGTCTGCAA	1878	False	NA	NA	False	AATAAA	-21	NA	30195789	30204008	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30197102_30197269_30197358_30200724_30200877_30200980_30201107_30201195_30201294_30202689_30202817_30202911_30203007_30203504_30203686_30203807
H1_mix_00031212	chr16	+	3793	7	ISM	ENSG00000213599.10	ENST00000566712.2	2380	9	2420	-298	2420	0	3prime_fragment	FALSE	canonical	3	214	junction_1	14.2058282249067	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATGATTTGTGTTCAT	4298	False	NA	3	True	AATAAA	-14	NA	30198209	30204306	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_30200877_30200980_30201107_30201195_30201294_30202689_30202817_30202911_30203007_30203504_30203686_30203807
H1_mix_00031213	chr16	+	1355	8	FSM	ENSG00000261052.6	ENST00000338971.10	1355	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	78.0418516710419	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATTTGTGTTCATGTAG	0	True	NA	7	True	AATAAA	-18	NA	30199254	30204310	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30199328_30200724_30200877_30200980_30201107_30201195_30201294_30202689_30202817_30202911_30203007_30203504_30203686_30203807
H1_mix_00031214	chr16	+	1326	8	FSM	ENSG00000261052.6	ENST00000395138.6	1326	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	82.5294010690513	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATTTGTGTTCATGTAG	605	False	NA	7	True	AATAAA	-18	NA	30199859	30204310	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30199904_30200724_30200877_30200980_30201107_30201195_30201294_30202689_30202817_30202911_30203007_30203504_30203686_30203807
H1_mix_00031220	chr16	+	3554	2	FSM	ENSG00000180035.13	ENST00000320159.2	3234	2	-320	0	-320	0	multi-exon	FALSE	canonical	3	247	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGCGGCTTTCTAGCTCC	312	False	NA	27	True	AATAAA	-18	NA	30395098	30400108	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30395874_30397329
H1_mix_00031221	chr16	+	3378	3	FSM	ENSG00000180035.13	ENST00000613509.2	3032	3	-346	0	-345	0	multi-exon	FALSE	canonical	3	99	junction_1	74	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGCGGCTTTCTAGCTCC	287	False	NA	27	True	AATAAA	-18	NA	30395073	30400108	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30395579_30395779_30395874_30397329
H1_mix_00031225	chr16	+	858	8	FSM	ENSG00000156858.12	ENST00000568754.5	856	8	-2	0	-2	0	multi-exon	FALSE	canonical	3	17	junction_1	26.3949593208821	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCTTGGCCCCGCTCT	22	False	NA	NA	False	NA	NA	NA	30650726	30654698	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30650807_30651595_30651669_30651795_30651965_30652720_30652843_30652913_30653104_30653364_30653409_30654229_30654340_30654628
H1_mix_00031228	chr16	+	2316	11	FSM	ENSG00000156858.12	ENST00000542965.2	2316	11	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_6	8.24681756800767	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGTATCTCTAGCTG	137	False	NA	28	True	AGTAAA	-20	NA	30651189	30656413	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30651669_30651795_30651965_30652720_30652843_30652913_30653104_30653364_30653409_30654229_30654340_30654628_30655215_30655350_30655421_30655501_30655594_30655867_30655940_30656031
H1_mix_00031232	chr16	+	11686	35	NIC	ENSG00000282034.1	novel	11692	31	NA	NA	-5832	-861	combination_of_known_splicesites	FALSE	canonical	3	16	junction_33	17.0095637661749	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCCCTTGGGCCCTTGGT	9	True	NA	56	True	NA	NA	NA	30698234	30744308	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_30698462_30699907_30699982_30700615_30700879_30704063_30704316_30707182_30707369_30707571_30707713_30709512_30709736_30709850_30710129_30710753_30710848_30710998_30711089_30711570_30711745_30711834_30712158_30712261_30712440_30712678_30712816_30713207_30713378_30713518_30713712_30716065_30716203_30716292_30716480_30720161_30720332_30720712_30720979_30721188_30721477_30722121_30722287_30722962_30723230_30723583_30725083_30728965_30729232_30729369_30729573_30733279_30733450_30733601_30733799_30733893_30734009_30734495_30734616_30736199_30736395_30736540_30736625_30737048_30740708_30741740_30741909_30743781
H1_mix_00031233	chr16	+	11756	35	NNC	ENSG00000282034.1	novel	11692	31	NA	NA	-5579	-838	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_33	16.8939292140892	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAGACTGGACATCTGAC	262	False	NA	79	True	NA	NA	NA	30698487	30744331	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_30698762_30699907_30699982_30700615_30700879_30704063_30704316_30707182_30707369_30707571_30707713_30709512_30709736_30709850_30710129_30710753_30710848_30710998_30711089_30711570_30711745_30711834_30712158_30712261_30712440_30712678_30712816_30713207_30713378_30713518_30713712_30716065_30716203_30716292_30716480_30720161_30720332_30720712_30720979_30721188_30721477_30722121_30722287_30722962_30723230_30723583_30725083_30728965_30729232_30729369_30729573_30733279_30733450_30733601_30733799_30733893_30734009_30734495_30734616_30736199_30736395_30736540_30736625_30737048_30740708_30741740_30741909_30743781
H1_mix_00031234	chr16	+	11625	31	FSM	ENSG00000282034.1	ENST00000380361.7	11692	31	0	67	0	-67	multi-exon	FALSE	canonical	3	8	junction_17	19.2989637027484	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTCATTTAATTTTGTCT	4694	False	NA	NA	False	NA	NA	NA	30704066	30745102	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30704316_30707182_30707369_30707571_30707713_30709512_30709736_30709850_30710129_30710753_30710848_30710998_30711089_30711570_30711745_30711834_30712158_30712261_30712440_30712678_30712816_30713207_30713378_30713518_30713712_30716065_30716203_30716292_30716480_30720161_30720332_30720712_30720979_30722121_30722287_30722962_30723230_30723583_30725083_30728965_30729232_30729369_30729573_30733279_30733450_30733601_30733799_30733893_30734009_30734495_30734616_30736199_30736395_30736540_30736625_30737048_30740708_30741740_30741909_30743781
H1_mix_00031235	chr16	+	5937	18	FSM	ENSG00000080603.17	ENST00000483083.3	5937	18	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_15	18.0265087385505	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGATGGAAACGTGTGTTA	NA	False	NA	16	True	NA	NA	NA	30709895	30726262	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30710129_30710753_30710848_30710998_30711089_30711570_30711745_30711834_30712158_30712261_30712440_30712678_30712816_30713207_30713378_30713518_30713712_30716065_30716203_30716292_30716480_30720161_30720332_30720712_30720979_30721188_30721477_30722121_30722287_30722562_30722749_30722962_30723230_30723583
H1_mix_00031236	chr16	+	1551	10	FSM	ENSG00000156873.16	ENST00000328273.11	1536	10	-15	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	72.1202699199978	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATGAAATAAAATCTGCTA	10	True	NA	-12	True	NA	NA	NA	30748424	30757331	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30748491_30748802_30748916_30751105_30751282_30751548_30751604_30753231_30753298_30753393_30753558_30756181_30756273_30756354_30756521_30756589_30756716_30756803
H1_mix_00031239	chr16	+	1778	9	ISM	ENSG00000156873.16	ENST00000424889.7	1566	11	233	3026	-19	0	internal_fragment	FALSE	canonical	3	212	junction_7	21.2363927021517	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTGTCCTGTGTCTGTCT	-17	True	NA	22	True	AATAAA	-23	NA	30748531	30757365	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_30748916_30751105_30751282_30751548_30751604_30753231_30753298_30753393_30753558_30756181_30756273_30756366_30756521_30756589_30756716_30756803
H1_mix_00031244	chr16	+	569	4	FSM	ENSG00000103549.22	ENST00000566811.5	569	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	89.3693957061862	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAACATGTGATGGGACT	685	False	NA	NA	False	NA	NA	NA	30762288	30763505	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30762399_30762474_30762678_30763117_30763286_30763417
H1_mix_00031245	chr16	+	4251	20	NIC	ENSG00000103549.22	novel	5309	20	NA	NA	-3	7	intron_retention	FALSE	canonical	3	29	junction_1	48.6880510576206	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCCCGATTTTAGCTGCA	10	False	NA	44	True	NA	NA	NA	30762332	30775222	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_30762399_30762474_30762678_30763117_30763286_30763417_30763560_30764178_30764386_30764937_30765060_30765180_30765328_30765424_30765500_30766162_30766283_30766378_30766559_30766740_30766877_30767893_30768016_30768102_30768531_30768618_30768737_30768837_30768988_30769185_30769399_30769474_30769601_30771832_30771974_30772088_30772191_30773937
H1_mix_00031246	chr16	+	6699	20	FSM	ENSG00000103549.22	ENST00000324685.11	5309	20	14	-1404	0	1404	multi-exon	FALSE	canonical	3	167	junction_1	25.1539305399106	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTCAGAGGGGTACAGG	13	False	NA	NA	False	NA	NA	NA	30762335	30777711	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30762361_30762474_30762678_30763117_30763286_30763417_30763560_30764178_30764386_30764937_30765060_30765180_30765328_30765424_30765500_30766162_30766283_30766378_30766559_30766740_30766877_30767893_30768016_30768102_30768531_30768618_30768737_30768837_30768988_30769185_30769399_30769474_30769601_30771832_30771974_30772088_30772191_30773937
H1_mix_00031248	chr16	+	210	1	FSM	ENSG00000274678.1	ENST00000621583.1	547	1	229	108	229	-108	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTCCCTGCTCTTTCTA	NA	False	NA	NA	False	GATAAA	-26	NA	30821566	30821776	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30821600_30821800
H1_mix_00031249	chr16	+	1445	2	FSM	ENSG00000260083.3	ENST00000570025.1	1429	2	-16	0	-16	0	multi-exon	FALSE	canonical	1	3	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGTTGGGAGGGGACGAG	9922	False	NA	NA	False	NA	NA	NA	30875205	30895079	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30876119_30894547
H1_mix_00031250	chr16	+	925	1	FSM	ENSG00000260083.3	ENST00000658747.1	925	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTGTCTTTGTTGACT	5399	False	NA	16	True	AATAAA	-22	NA	30894295	30895220	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30894300_30895200
H1_mix_00031262	chr16	+	864	4	FSM	ENSG00000103496.15	ENST00000565483.1	846	4	-18	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	97.3801257387199	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAACTTACTTTCTCCT	25	True	NA	-18	True	NA	NA	NA	31033587	31034853	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31033836_31034012_31034115_31034203_31034326_31034461
H1_mix_00031263	chr16	+	1002	3	FSM	ENSG00000103496.15	ENST00000461455.5	1002	3	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_2	20.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTCAGCCTTAGTCATT	25	True	NA	6	True	AATAAA	-18	NA	31033587	31034877	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31033836_31034012_31034115_31034225
H1_mix_00031269	chr16	+	6909	3	FSM	ENSG00000167395.10	ENST00000300850.5	6892	3	-17	0	-17	0	multi-exon	FALSE	canonical	3	19	junction_1	9.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCCAGTCCTCATAGGCA	-23	True	NA	NA	False	NA	NA	NA	31074404	31084196	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31074632_31076245_31081702_31082970
H1_mix_00031271	chr16	+	1922	11	FSM	ENSG00000103507.14	ENST00000394950.7	1997	11	75	0	-17	0	multi-exon	FALSE	canonical	3	577	junction_1	31.736571963588	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGGCCCCGTGTGTGGG	-42	True	NA	28	True	ATTAAA	-20	NA	31108368	31112567	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31108480_31109046_31109419_31109510_31109580_31109672_31109784_31110076_31110125_31110204_31110325_31110400_31110500_31110687_31110762_31111090_31111220_31111299_31111390_31111868
H1_mix_00031272	chr16	+	439	3	FSM	ENSG00000103507.14	ENST00000567682.1	439	3	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_2	293	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTGGAGCAGGGAAGTG	2241	False	NA	-85	True	NA	NA	NA	31111367	31112454	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31111390_31111868_31112028_31112196
H1_mix_00031273	chr16	+	1495	11	FSM	ENSG00000103510.20	ENST00000219797.9	1495	11	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_7	18.1383571472171	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGGACTTTGGAGGGGA	-6	True	NA	41	True	AATAAA	-14	NA	31117663	31131359	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31117893_31120185_31120261_31120338_31120515_31127034_31127089_31127188_31127354_31128049_31128140_31130016_31130158_31130266_31130361_31130455_31130607_31130745_31130901_31131194
H1_mix_00031274	chr16	+	1789	10	FSM	ENSG00000103510.20	ENST00000448516.6	1789	10	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_7	18.9606480068458	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGGACTTTGGAGGGGA	-6	True	NA	41	True	AATAAA	-14	NA	31117663	31131359	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31117893_31120185_31120261_31120338_31120515_31127034_31127089_31127188_31127354_31128049_31128140_31130016_31130158_31130266_31130361_31130455_31130607_31130745
H1_mix_00031275	chr16	+	392	1	FSM	ENSG00000278133.1	ENST00000613584.1	392	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTGTTTTTGTAGTTCTT	5615	False	NA	NA	False	AATAAA	-19	NA	31123672	31124064	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31123700_31124100
H1_mix_00031277	chr16	+	1801	15	FSM	ENSG00000089280.19	ENST00000568685.1	1785	15	-16	0	-3	0	multi-exon	FALSE	canonical	3	17	junction_8	640.780773744032	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCCATTAAAAGTGACCAT	NA	False	NA	1	True	NA	NA	NA	31180134	31191575	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31180228_31182397_31182423_31182512_31182665_31183857_31184003_31184208_31184397_31184938_31185180_31186801_31186837_31188324_31188358_31189119_31189227_31189664_31189795_31190039_31190142_31190274_31190399_31190741_31190843_31190962_31191111_31191398
H1_mix_00031278	chr16	+	1823	15	FSM	ENSG00000089280.19	ENST00000380244.7	1818	15	-5	0	-4	0	multi-exon	FALSE	canonical	3	562	junction_3	510.220465553262	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTGTTCCTCTTCCCC	NA	False	NA	28	True	ATTAAA	-17	NA	31180133	31191602	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31180228_31182397_31182423_31182512_31182665_31183860_31184003_31184208_31184397_31184938_31185180_31186801_31186837_31188324_31188358_31189122_31189227_31189664_31189795_31190039_31190142_31190274_31190399_31190741_31190843_31190962_31191111_31191398
H1_mix_00031279	chr16	+	4936	13	FSM	ENSG00000089280.19	ENST00000487509.6	4920	13	-16	0	-4	0	multi-exon	FALSE	canonical	3	1132	junction_3	443.552225097439	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTGTTCCTCTTCCCC	NA	False	NA	28	True	ATTAAA	-17	NA	31180133	31191602	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31180228_31182397_31182423_31182512_31182665_31183857_31184003_31184208_31184397_31184938_31188358_31189122_31189227_31189664_31189795_31190039_31190142_31190274_31190399_31190741_31190843_31190962_31191111_31191398
H1_mix_00031286	chr16	+	4844	4	FSM	ENSG00000140691.18	ENST00000457010.6	4844	4	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_3	9.17726659862414	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTTGTGTGGTGTGT	-16	True	NA	5	True	ATTAAA	-17	NA	31458823	31467166	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31460000_31461921_31462030_31462130_31462918_31464393
H1_mix_00031288	chr16	+	3108	6	FSM	ENSG00000140691.18	ENST00000268314.9	3108	6	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_5	13.3056379027839	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTGTGTTGTGTGGTGTG	0	True	NA	4	True	ATTAAA	-16	NA	31459500	31467165	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31460000_31461921_31462030_31462130_31462918_31464393_31464888_31465849_31465983_31466078
H1_mix_00031291	chr16	+	1295	7	ISM	ENSG00000140682.19	ENST00000569703.5	1005	8	-7	971	0	558	5prime_fragment	FALSE	canonical	3	12	junction_1	7.86694914747063	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGTCTGTGTTGGTGTA	9	True	NA	-2	True	AATAAA	-7	NA	31472167	31475317	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_31472202_31473440_31473557_31473681_31473735_31473834_31473978_31474151_31474240_31474349_31474456_31474562
H1_mix_00031292	chr16	+	1814	11	FSM	ENSG00000140682.19	ENST00000394858.6	1803	11	-13	2	-13	0	multi-exon	FALSE	canonical	0	0	junction_1	10.1039596198718	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGGTGCTGTCTCTGAA	14	False	NA	6	True	CATAAA	-18	NA	31473191	31477958	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31473251_31473440_31473557_31473681_31473735_31473834_31473978_31474151_31474240_31474349_31474456_31474562_31474758_31476011_31476186_31476480_31476563_31476861_31477011_31477309
H1_mix_00031294	chr16	+	493	3	FSM	ENSG00000169877.10	ENST00000302312.9	488	3	-5	0	-5	0	multi-exon	FALSE	canonical	1	1	junction_1	4.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGGCTTCTCTTTCAT	-6	True	NA	8	True	AATAAA	-23	NA	31527894	31528803	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31527963_31528135_31528215_31528457
H1_mix_00031299	chr16	+	2774	5	FSM	ENSG00000197302.11	ENST00000316491.14	2759	5	-15	0	0	0	multi-exon	FALSE	canonical	3	74	junction_4	17.4839211849059	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCATTGTATTCATTTA	NA	False	NA	5	True	AATAAA	-14	NA	31713228	31761565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31713436_31722625_31722753_31723257_31723354_31753765_31753901_31759356
H1_mix_00031300	chr16	+	6548	5	NIC	ENSG00000197302.11	novel	2416	7	NA	NA	3	0	intron_retention	FALSE	canonical	1	2	junction_3	43.5624551649698	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATTTGCACCAGAATCCT	2	True	NA	9	True	AATAAA	-14	NA	31713305	31759886	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_31713449_31722625_31722753_31723257_31723354_31733566_31733628_31753765
H1_mix_00031301	chr16	+	3312	5	FSM	ENSG00000185947.15	ENST00000394846.7	680	5	-49	-2583	-49	-49	multi-exon	FALSE	canonical	3	64	junction_4	33.0189339621981	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTGTTTAGAGCTCTTTT	3518	False	NA	28	True	AATAAA	-22	NA	31873757	31917308	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31873970_31884497_31884625_31885160_31885257_31890206_31890251_31914475
H1_mix_00031302	chr16	+	3284	5	NNC	ENSG00000185947.15	novel	563	5	NA	NA	-49	50366	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	55.5489648868456	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGCTGGAGGCATCAT	3518	False	NA	NA	False	NA	NA	NA	31873757	31967723	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_31873970_31884497_31884625_31885160_31885257_31914475_31917299_31967697
H1_mix_00031306	chr16	+	4035	12	FSM	ENSG00000166123.14	ENST00000340124.9	3992	12	0	-43	0	43	multi-exon	FALSE	canonical	0	0	junction_1	254.22122207256	224	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTACTAACTTTACACCTT	-13	True	NA	71	True	NA	NA	NA	46884361	46931332	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_46884468_46884693_46884959_46897647_46897738_46900681_46900791_46906841_46906976_46909683_46909928_46916627_46916708_46918620_46918758_46922241_46922417_46924388_46924545_46926924_46927038_46928906
H1_mix_00031318	chr16	+	2113	6	FSM	ENSG00000205423.12	ENST00000427478.7	2092	6	-21	0	-21	0	multi-exon	FALSE	canonical	3	187	junction_1	26.6953179415417	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGTGATTGGACTTTTTCT	NA	False	NA	9	True	AATAAA	-15	NA	50025203	50037081	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_50025341_50026395_50026468_50029724_50029799_50033396_50033507_50034101_50034157_50035416
H1_mix_00031327	chr16	+	8370	12	FSM	ENSG00000121274.14	ENST00000561678.7	8440	12	-16	86	-16	-82	multi-exon	FALSE	canonical	3	20	junction_3	5.48175033879321	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCGGCCTCTAGTGCTTA	19	True	NA	NA	False	TATAAA	-15	NA	50153289	50235224	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_50154260_50211322_50211447_50214220_50214268_50216074_50216196_50217555_50217664_50222305_50222435_50223173_50223388_50224656_50224784_50224890_50224995_50225097_50225286_50227838_50228004_50229151
H1_mix_00031330	chr16	+	6138	25	FSM	ENSG00000121281.13	ENST00000254235.7	6138	25	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	5.37677619231285	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATCTGAAGGTATTTTA	8340	False	NA	30	True	ATTAAA	-20	NA	50287911	50318132	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_50288351_50290456_50290661_50291735_50291898_50292675_50292826_50293353_50293503_50294639_50294752_50298903_50299032_50300714_50300874_50301081_50301215_50304359_50304552_50304924_50304960_50305502_50305587_50305776_50305850_50307049_50307148_50308326_50308412_50308666_50308793_50309547_50309647_50310686_50310881_50311692_50311787_50312035_50312192_50312889_50313037_50313957_50314063_50314291_50314407_50315013_50315139_50315358
H1_mix_00031331	chr16	+	1595	4	FSM	ENSG00000121281.13	ENST00000568930.1	1579	4	-16	0	-16	0	multi-exon	FALSE	canonical	3	22	junction_2	0.816496580927726	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTTCCAGGCCAGCTGG	9086	False	NA	NA	False	NA	NA	NA	50313087	50315738	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_50314063_50314291_50314407_50315013_50315139_50315358
H1_mix_00031332	chr16	+	17036	10	FSM	ENSG00000140807.7	ENST00000268459.6	17039	10	0	3	0	-3	multi-exon	FALSE	canonical	3	12	junction_9	2.70801280154532	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTGGCGTTGCTCAGATC	-1	True	NA	5	True	AATAAA	-13	NA	50548395	50649246	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_50548579_50548716_50548750_50549421_50549556_50608293_50608361_50621601_50621709_50625484_50625581_50630185_50630334_50630825_50630911_50632280_50632409_50633191
H1_mix_00031334	chr16	+	3584	18	FSM	ENSG00000083799.18	ENST00000398568.6	3536	18	-49	1	1	0	multi-exon	FALSE	canonical	3	59	junction_1	13.5947272498031	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAAGGATATGAAATCATT	-11	True	NA	10	True	AATAAA	-17	NA	50742070	50796881	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_50742217_50742761_50742842_50749575_50750203_50751603_50751907_50754318_50754425_50776178_50776278_50777824_50777942_50779664_50780045_50781245_50781412_50782324_50782467_50784328_50784452_50786854_50786947_50787785_50787853_50791557_50791691_50792596_50792706_50793545_50793665_50794211_50794429_50796323
H1_mix_00031335	chr16	+	3498	18	FSM	ENSG00000083799.18	ENST00000569418.5	3513	18	15	0	-5	0	multi-exon	FALSE	canonical	3	26	junction_1	17.7865078526308	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAAGGATATGAAATCATT	-17	True	NA	10	True	AATAAA	-17	NA	50742064	50796881	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_50742125_50742761_50742842_50749575_50750203_50751603_50751907_50754318_50754425_50776178_50776278_50777824_50777942_50779664_50780045_50781245_50781412_50782324_50782467_50784328_50784452_50786854_50786947_50787785_50787853_50791557_50791691_50792596_50792706_50793545_50793665_50794211_50794429_50796323
H1_mix_00031337	chr16	+	2568	10	FSM	ENSG00000083799.18	ENST00000563629.1	2568	10	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_5	12.2181811501256	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCTGTGACTTATTTGA	455	False	NA	NA	False	AATAAA	-14	NA	50749962	50787746	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_50750203_50751603_50751907_50754318_50754425_50776178_50776278_50777824_50777942_50779664_50780045_50781245_50781412_50782324_50782467_50784328_50784452_50786854
H1_mix_00031342	chr16	+	11337	38	FSM	ENSG00000177200.18	ENST00000398510.7	11337	38	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	7.72358478104423	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGAAGTTTAATTATTT	76	False	NA	25	True	ATTAAA	-27	NA	53156002	53327451	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_53157542_53209481_53209814_53222643_53222756_53226365_53226513_53227395_53227465_53227547_53227604_53228982_53229101_53231418_53231506_53231646_53231785_53235184_53235307_53238342_53238587_53242839_53243017_53245335_53245480_53245594_53245851_53247292_53247504_53249870_53250067_53254437_53254606_53255599_53255780_53262986_53263098_53267293_53267491_53267926_53268127_53273625_53273786_53274212_53274303_53285595_53285700_53286225_53286344_53287956_53288015_53291724_53291768_53292832_53293053_53296955_53297159_53303719_53304626_53306236_53306398_53307680_53307954_53308685_53308855_53314376_53314517_53314822_53315045_53318211_53318341_53321525_53321631_53324019
H1_mix_00031344	chr16	+	1202	6	FSM	ENSG00000177200.18	ENST00000569225.5	1862	6	0	660	0	-660	multi-exon	FALSE	canonical	3	20	junction_4	6.62117814289874	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAGCATACTGAATTTAC	NA	False	NA	NA	False	CATAAA	-3	NA	53235136	53247503	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_53235307_53238342_53238587_53242839_53243017_53245335_53245480_53245594_53245851_53247292
H1_mix_00031366	chr16	+	416	3	FSM	ENSG00000198417.7	ENST00000568475.1	416	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	67	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTTCAGTTTCCCTTAT	3	True	NA	11	True	ATTAAA	-17	NA	56658011	56659305	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_56658087_56658674_56658783_56659072
H1_mix_00031371	chr16	+	442	4	FSM	ENSG00000102900.13	ENST00000566678.1	442	4	0	0	0	0	multi-exon	FALSE	canonical	3	1533	junction_1	33.3099918276117	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTCTACTTGACTAGT	133	False	NA	7	True	AATAAA	-18	NA	56748348	56805686	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_56748427_56758537_56758656_56798475_56798539_56805503
H1_mix_00031374	chr16	+	410	3	FSM	ENSG00000102900.13	ENST00000569322.1	410	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	647.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTTTCAACATTCTTT	8447	False	NA	15	True	AATAAA	-15	NA	56839009	56844764	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_56839070_56839520_56839605_56844498
H1_mix_00031377	chr16	+	2871	8	FSM	ENSG00000051108.15	ENST00000439977.7	2853	8	-19	1	-19	-1	multi-exon	FALSE	canonical	3	280	junction_6	34.2904758598343	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATTGTGGTCATTTAAAT	296	False	NA	NA	False	AATAAA	-16	NA	56932122	56944863	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_56932392_56935234_56935313_56935400_56935476_56936686_56936818_56939236_56939360_56939894_56940246_56942131_56942238_56943125
H1_mix_00031385	chr16	+	3525	15	FSM	ENSG00000159579.14	ENST00000394420.9	3503	15	-22	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	40.6687088257178	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGATTTCACAACTTTCA	-17	True	NA	36	True	AATAAA	-21	NA	57186306	57240469	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_57186452_57204503_57205009_57208057_57208111_57209074_57209188_57212971_57213099_57213887_57213947_57216106_57216174_57216903_57217036_57220731_57220848_57221271_57221416_57227341_57227454_57230710_57230814_57231166_57231320_57235123_57235229_57238878
H1_mix_00031387	chr16	+	4271	7	FSM	ENSG00000159579.14	ENST00000564530.5	3361	7	-910	0	-910	0	multi-exon	FALSE	canonical	3	224	junction_4	37.0198895490279	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACATCTGTTGCCTTTTT	NA	False	NA	13	True	AATACA	-20	NA	57218761	57240446	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_57220848_57221271_57221416_57227341_57227454_57230710_57230814_57231166_57231320_57235123_57235229_57238878
H1_mix_00031388	chr16	+	1969	6	FSM	ENSG00000102931.8	ENST00000219204.8	1969	6	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_5	16.2185079461706	352	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTGTATTCTTTCTTTA	13	True	NA	44	True	AGTAAA	-35	NA	57245258	57253635	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_57245406_57246079_57246142_57248536_57248644_57249766_57249853_57250410_57250508_57252165
H1_mix_00031397	chr16	+	2652	20	NIC	ENSG00000140854.13	novel	2618	20	NA	NA	2	6	intron_retention	FALSE	canonical	0	0	junction_16	83.2038513917871	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTGTGGGGAATGTTT	36	False	NA	19	True	ATTAAA	-19	NA	57735792	57757250	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_57735856_57736977_57737284_57741686_57741818_57744393_57744512_57750826_57750928_57751260_57751303_57751640_57751725_57751939_57752056_57752529_57752602_57752777_57752929_57753076_57753268_57753388_57753520_57753944_57753996_57754929_57754998_57755118_57755239_57755344_57755495_57755789_57755918_57755991_57756067_57756355_57756473_57756813
H1_mix_00031400	chr16	+	2374	3	FSM	ENSG00000159648.13	ENST00000562915.1	2360	3	-14	0	-14	0	multi-exon	FALSE	canonical	3	25	junction_1	8	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTCTGCTCTATCCATGA	-13	True	NA	NA	False	AATAAA	-20	NA	57985166	57988116	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_57985268_57985481_57985547_57985908
H1_mix_00031401	chr16	+	581	3	FSM	ENSG00000103005.12	ENST00000566292.5	575	3	-21	15	-10	-15	multi-exon	FALSE	canonical	3	688	junction_2	14	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTCTCCTCCTCTCCTGA	1786	False	NA	NA	False	NA	NA	NA	58001394	58010155	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_58001582_58002478_58002646_58009928
H1_mix_00031405	chr16	+	2254	4	FSM	ENSG00000103005.12	ENST00000563149.1	1751	4	0	-503	0	-249	multi-exon	TRUE	canonical	1	4	junction_3	329.238852844287	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTTGTGTGTTACTCGG	-9	True	NA	NA	False	AGTAAA	-20	NA	58001419	58014061	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_58001582_58002478_58002646_58009928_58010113_58012320
H1_mix_00031406	chr16	+	3888	3	FSM	ENSG00000103005.12	ENST00000566082.1	3888	3	0	0	0	0	multi-exon	FALSE	canonical	3	615	junction_1	4.5	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTTTTGGACTACTTGT	NA	False	NA	19	True	AATAAA	-21	NA	58015112	58021617	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_58017440_58018971_58019056_58020140
H1_mix_00031409	chr16	+	1215	8	NNC	ENSG00000103021.10	novel	5272	9	NA	NA	64	-6324	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_7	24.9391095204594	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGATTACTCACGAAATTGA	10	False	NA	NA	False	AATAAA	-14	NA	58250051	58277512	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_58250116_58252726_58252854_58253997_58254160_58258367_58258524_58259853_58259935_58262384_58262541_58267478_58267587_58277151
H1_mix_00031410	chr16	+	2168	2	FSM	ENSG00000181938.14	ENST00000328514.11	1932	2	-236	0	-236	0	multi-exon	FALSE	canonical	3	24	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGTTCTGTACAAGTGC	NA	False	NA	18	True	AATAAA	-19	NA	58392157	58406036	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_58392788_58404498
H1_mix_00031411	chr16	+	2200	3	FSM	ENSG00000181938.14	ENST00000318129.6	2200	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	19.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTTGCTTGTGTGGTA	-20	True	NA	19	True	AATACA	-22	NA	58392470	58406147	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_58392788_58403097_58403332_58404498
H1_mix_00031413	chr16	+	3606	16	FSM	ENSG00000103034.15	ENST00000394282.8	3626	16	20	0	20	0	multi-exon	FALSE	canonical	3	32	junction_1	36.3455025492227	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCTTATGTGCTCATT	39	False	NA	15	True	ATTAAA	-16	NA	58464043	58513619	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_58464468_58487755_58487851_58494963_58495009_58503797_58503904_58504153_58504275_58504358_58504422_58504588_58504650_58506386_58506474_58506557_58506615_58506911_58507016_58507807_58507865_58507947_58508000_58508961_58509010_58509153_58509190_58509300_58509353_58511421
H1_mix_00031416	chr16	+	3265	14	FSM	ENSG00000103034.15	ENST00000566192.5	3265	14	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	42.3346767091826	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCTTATGTGCTCATT	NA	False	NA	15	True	ATTAAA	-16	NA	58500046	58513619	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_58500270_58503797_58503904_58504153_58504275_58504358_58504422_58504588_58504650_58506386_58506474_58506557_58506615_58506911_58507016_58507807_58507865_58507947_58508000_58508961_58509010_58509153_58509190_58509300_58509353_58511421
H1_mix_00031417	chr16	+	3656	15	FSM	ENSG00000103034.15	ENST00000356752.8	1375	15	-26	-2255	10	362	multi-exon	FALSE	canonical	1	2	junction_1	54.2443921676025	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAAATGCCTTAAAGA	15	True	NA	NA	False	AATAAA	-26	NA	58500116	58513990	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_58500270_58500987_58501078_58503797_58503904_58504153_58504275_58504358_58504422_58504588_58504650_58506386_58506474_58506557_58506615_58506911_58507016_58507807_58507865_58507947_58508000_58508961_58509010_58509153_58509190_58509300_58509353_58511421
H1_mix_00031418	chr16	+	3444	1	FSM	ENSG00000103034.15	ENST00000563209.1	2700	1	-536	-208	-536	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGCTTATGTGCTCAT	4264	False	NA	14	True	ATTAAA	-15	NA	58510174	58513618	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_58510200_58513600
H1_mix_00031423	chr16	+	2827	8	ISM	ENSG00000103037.12	ENST00000310682.6	2042	9	312	-871	0	-648	3prime_fragment	FALSE	canonical	3	66	junction_1	28.3750393328865	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTTTTTGCTATTCTTT	267	False	NA	15	True	ATTAAA	-25	NA	58515790	58520533	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_58515881_58515952_58516098_58516201_58516344_58516477_58516673_58516807_58516929_58518050_58518232_58518400_58518544_58518723
H1_mix_00031426	chr16	+	253	1	FSM	ENSG00000261519.3	ENST00000563151.1	1910	1	1319	338	1319	-338	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGACACTTCGTTCCCCCC	NA	False	NA	NA	False	NA	NA	NA	66550598	66550851	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_66550600_66550900
H1_mix_00031428	chr16	+	669	4	FSM	ENSG00000217555.13	ENST00000264001.9	656	4	-13	0	0	0	multi-exon	FALSE	canonical	3	85	junction_2	77.5112895003044	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTTCTGCAGTTATTT	-49	True	NA	21	True	ATTAAA	-21	NA	66552562	66566068	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_66552794_66558189_66558349_66563121_66563218_66565885
H1_mix_00031430	chr16	+	577	3	FSM	ENSG00000217555.13	ENST00000345436.8	571	3	-6	0	0	0	multi-exon	FALSE	canonical	3	111	junction_2	50	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGCAGTTATTTTAAC	-49	True	NA	25	True	ATTAAA	-25	NA	66552562	66566072	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_66552794_66558189_66558349_66565885
H1_mix_00031436	chr16	+	1943	5	FSM	ENSG00000140931.20	ENST00000567572.6	1901	5	-42	0	-42	0	multi-exon	FALSE	canonical	3	266	junction_2	16.2076370887307	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATCCTTTATTTCCCTA	334	False	NA	23	True	AATACA	-19	NA	66604661	66613887	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_66604953_66608308_66608465_66609434_66609531_66609882_66610004_66612608
H1_mix_00031438	chr16	+	1959	5	FSM	ENSG00000140931.20	ENST00000566756.5	1950	5	-9	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	119.101847172913	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGTTTTAGCAAAAATACA	-5	True	NA	-15	True	NA	NA	NA	66604731	66613849	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_66604953_66608308_66608465_66609434_66609531_66609758_66610004_66612608
H1_mix_00031441	chr16	+	6997	2	FSM	ENSG00000172840.7	ENST00000311765.4	6997	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTTAGTTTCTTTTGG	-44	True	NA	0	True	ATTAAA	-24	NA	66880514	66891101	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_66880641_66884230
H1_mix_00031442	chr16	+	7079	3	FSM	ENSG00000172840.7	ENST00000561704.1	574	3	7	-6512	-5	5	multi-exon	FALSE	canonical	1	2	junction_1	4	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTTTCTTTTGGTTTGA	-33	True	NA	5	True	ATTAAA	-29	NA	66880525	66891106	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_66880641_66883014_66883103_66884230
H1_mix_00031446	chr16	+	3828	13	FSM	ENSG00000172828.13	ENST00000303334.9	3858	13	30	0	6	0	multi-exon	FALSE	canonical	1	2	junction_3	1.53432938662683	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTGGGTCCACACTGCC	3	True	NA	24	True	AATAAA	-16	NA	66961295	66975149	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_66961390_66963178_66963384_66963490_66963630_66963801_66963936_66964356_66964511_66964622_66964728_66966243_66966346_66966724_66966866_66969678_66969760_66971171_66971320_66972355_66972506_66972667_66972747_66972853
H1_mix_00031447	chr16	+	2928	6	FSM	ENSG00000172828.13	ENST00000543856.1	3178	6	250	0	250	0	multi-exon	FALSE	canonical	1	2	junction_3	1.46969384566991	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTTGGGTCCACACTGC	335	False	NA	23	True	AATAAA	-15	NA	66967724	66975148	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_66967900_66969678_66969760_66971171_66971320_66972355_66972506_66972667_66972747_66972853
H1_mix_00031450	chr16	+	3139	6	FSM	ENSG00000067955.15	ENST00000412916.7	3103	6	-59	23	-26	0	multi-exon	FALSE	canonical	3	325	junction_5	142.009295470402	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACTTCTGTGTAGTAA	NA	False	NA	82	True	NA	NA	NA	67029089	67101035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_67029486_67029726_67029814_67036638_67036756_67066681_67066799_67082212_67082309_67098709
H1_mix_00031462	chr16	+	2626	8	FSM	ENSG00000205250.9	ENST00000567007.5	2615	8	-11	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	342.390098559869	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGATGTGGTTCTTTG	3	True	NA	20	True	AATAAA	-17	NA	67192173	67198917	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_67193171_67193471_67193516_67194397_67194460_67194685_67194981_67195781_67196007_67197598_67197647_67197866_67197912_67198007
H1_mix_00031466	chr16	+	2277	19	FSM	ENSG00000102890.16	ENST00000477898.5	2281	19	0	4	0	2	multi-exon	TRUE	canonical	3	24	junction_1	10.895831120317	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCGGGCTGAGCCTGTGA	10	False	NA	30	True	AATAAA	-41	NA	67199508	67204025	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_67199594_67199683_67199757_67199950_67200002_67200191_67200362_67200450_67200551_67200656_67200809_67200889_67200969_67201384_67201436_67201519_67201643_67201741_67201874_67201976_67202079_67202175_67202285_67202396_67202534_67202626_67202791_67202891_67203005_67203118_67203224_67203326_67203410_67203496_67203584_67203664
H1_mix_00031468	chr16	+	903	6	FSM	ENSG00000168701.19	ENST00000563953.5	887	6	-16	0	1	0	multi-exon	FALSE	canonical	3	16	junction_1	233.559414282533	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCTTAGAATGTGGCTG	NA	False	NA	9	True	NA	NA	NA	67227103	67229262	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_67227225_67227718_67227932_67228354_67228415_67228494_67228632_67228796_67228882_67228975
H1_mix_00031470	chr16	+	4824	16	NIC	ENSG00000135740.17	novel	3990	15	NA	NA	-651	0	intron_retention	FALSE	canonical	0	0	junction_13	19.0356390897589	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTGTCTTGTGTCCATG	1293	False	NA	15	True	ATTAAA	-15	NA	67248220	67272190	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_67249202_67252541_67252845_67255020_67255185_67255392_67255931_67256468_67256690_67256910_67257114_67257344_67257435_67257530_67257602_67258317_67258448_67259572_67259662_67259819_67259947_67262211_67262290_67264351_67264523_67265039_67265107_67266087_67266226_67270737
H1_mix_00031472	chr16	+	3710	16	FSM	ENSG00000135740.17	ENST00000299798.16	3708	16	-2	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	20.0588024456984	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGTCTTGTGTCCATGT	-16	True	NA	16	True	ATTAAA	-16	NA	67248976	67272191	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_67249202_67252541_67252845_67255020_67255185_67255392_67255472_67255752_67255931_67256468_67256690_67256910_67257114_67257344_67257435_67257530_67257602_67258317_67258448_67259572_67259662_67259819_67259947_67264351_67264523_67265039_67265107_67266087_67266226_67270737
H1_mix_00031474	chr16	+	4482	22	NIC	ENSG00000196155.13	novel	4512	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	9.52999798940191	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTCTGATGGGCACATGC	60	False	NA	14	True	AATAAA	-17	NA	67279595	67289479	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_67279662_67279875_67280544_67280710_67280807_67280881_67281006_67281090_67281185_67281566_67281645_67281723_67281838_67282008_67282108_67282200_67282350_67282502_67282642_67282741_67282859_67284274_67284458_67284712_67285216_67285289_67285537_67286273_67286364_67286444_67286667_67286748_67286920_67286999_67287178_67287897_67288015_67288166_67288401_67288488_67288605_67288802
H1_mix_00031476	chr16	+	540	4	FSM	ENSG00000176387.7	ENST00000567684.2	540	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	49.5468353064945	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGCTTGGGGGCCTATG	20	True	NA	NA	False	NA	NA	NA	67430651	67436261	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_67430780_67435627_67435841_67435956_67436143_67436248
H1_mix_00031477	chr16	+	1915	5	FSM	ENSG00000176387.7	ENST00000326152.6	1896	5	-19	0	-19	0	multi-exon	FALSE	canonical	3	93	junction_1	19.3196790863617	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGCAGGTGCTGTTTGGA	5	False	NA	44	True	AATAAA	-25	NA	67431101	67437553	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_67431514_67435627_67435841_67435956_67436143_67436248_67436387_67436587
H1_mix_00031479	chr16	+	4096	22	NIC	ENSG00000039523.20	novel	4260	23	NA	NA	5	0	intron_retention	FALSE	canonical	3	14	junction_13	19.5045200877867	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCCTGGTACACTCCTG	-22	True	NA	13	True	AATAAA	-21	NA	67528821	67546786	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_67528915_67538423_67538551_67538671_67538825_67538989_67539069_67539727_67539752_67539845_67539900_67540052_67540206_67540299_67540364_67540457_67540502_67540578_67540705_67541429_67541579_67541652_67541783_67541866_67543265_67543350_67543470_67544298_67544432_67544694_67544831_67544955_67545118_67545375_67545535_67545663_67545861_67545948_67546033_67546140_67546232_67546365
H1_mix_00031481	chr16	+	4266	22	FSM	ENSG00000039523.20	ENST00000428437.6	4152	22	-116	2	-116	0	multi-exon	FALSE	canonical	3	13	junction_1	20.3303778380666	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCCTGGTACACTCCTG	2476	False	NA	13	True	AATAAA	-21	NA	67537337	67546786	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_67537598_67538423_67538551_67538671_67538825_67538989_67539069_67539727_67539752_67539845_67539900_67540052_67540206_67540299_67540364_67540457_67540502_67540578_67540705_67541429_67541579_67541652_67541783_67541866_67543265_67543347_67543470_67544298_67544432_67544694_67544831_67544955_67545118_67545375_67545535_67545663_67545861_67545948_67546033_67546140_67546232_67546365
H1_mix_00031483	chr16	+	3722	12	FSM	ENSG00000102974.16	ENST00000646771.1	3706	12	-16	0	0	0	multi-exon	FALSE	canonical	3	49	junction_11	114.371079393581	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTGTACAGCTAATAAATC	18	True	NA	-26	True	AATAAA	-39	NA	67562572	67639138	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_67562725_67571147_67571265_67610823_67611614_67611950_67612122_67616744_67616879_67620696_67620818_67621441_67621592_67626554_67626716_67628369_67628553_67629397_67629534_67636689_67636852_67637693
H1_mix_00031484	chr16	+	3980	11	FSM	ENSG00000102974.16	ENST00000642819.1	3975	11	-5	0	-5	0	multi-exon	FALSE	canonical	3	388	junction_7	31.2896148905671	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGATTAACAAGTGCTCCAA	5	False	NA	-2	True	AATAAA	-7	NA	67570767	67639162	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_67571265_67610823_67611614_67611950_67612122_67616744_67616879_67620696_67620818_67621441_67621592_67626554_67626716_67628369_67628553_67629397_67629534_67636689_67636852_67637687
H1_mix_00031485	chr16	+	3713	12	FSM	ENSG00000102974.16	ENST00000644753.1	3713	12	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	120.35786857919	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCAAAGACTCCATCTTG	2824	False	NA	11	True	AATAAA	-20	NA	67570740	67639175	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_67570841_67571147_67571265_67610823_67611614_67611950_67612122_67616744_67616879_67620696_67620818_67621441_67621592_67626554_67626716_67628369_67628553_67629397_67629534_67636689_67636852_67637687
H1_mix_00031489	chr16	+	1445	10	NIC	ENSG00000159753.14	novel	4462	38	NA	NA	-58	-58	combination_of_known_junctions	TRUE	canonical	3	25	junction_7	41.4407207144535	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCGGAGCCCACCCTCCC	77	False	NA	-98	True	NA	NA	NA	67652906	67657460	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_67653255_67654148_67654250_67654331_67654693_67654777_67654901_67656030_67656068_67656227_67656300_67656423_67656646_67656833_67656882_67657238_67657317_67657405
H1_mix_00031495	chr16	+	1322	4	FSM	ENSG00000159761.15	ENST00000445068.1	1314	4	-10	2	-6	0	multi-exon	FALSE	canonical	3	6	junction_1	12.5698050899765	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTGTGATTCCCCAGAT	6	True	NA	11	True	AATAAA	-18	NA	67666826	67668755	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_67667073_67667226_67667526_67667877_67668099_67668199
H1_mix_00031496	chr16	+	1717	2	FSM	ENSG00000159761.15	ENST00000459925.1	1719	2	0	2	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTGTGATTCCCCAGAT	-5	True	NA	11	True	AATAAA	-18	NA	67666815	67668755	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_67667073_67667295
H1_mix_00031502	chr16	+	1119	5	FSM	ENSG00000102898.12	ENST00000569436.6	1119	5	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	1046.77179342013	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTTAATTAGTTTACTA	-18	True	NA	28	True	AATAAA	-29	NA	67847160	67871323	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_67847457_67865101_67865230_67868339_67868412_67868500_67868600_67870799
H1_mix_00031503	chr16	+	5272	28	FSM	ENSG00000038358.15	ENST00000572221.5	5267	28	-5	0	-5	0	multi-exon	FALSE	canonical	2	3	junction_2	112.765765947923	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGAGTATGTGTGTGC	-41	True	NA	13	True	ATTAAA	-13	NA	67873046	67884495	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_67873344_67875737_67875838_67875944_67876102_67876487_67876600_67876872_67876973_67877216_67877407_67877508_67878276_67878359_67878444_67878535_67878632_67878736_67878840_67878956_67879138_67879236_67879310_67879411_67879504_67879586_67879775_67879849_67879972_67880062_67880217_67880556_67880991_67881075_67881181_67881264_67881418_67881496_67881534_67881667_67881846_67881953_67882110_67882211_67882328_67882428_67882595_67882678_67882866_67882957_67883178_67883567_67883732_67883955
H1_mix_00031505	chr16	+	4628	30	NIC	ENSG00000038358.15	novel	4767	29	NA	NA	26	-1	combination_of_known_junctions	FALSE	canonical	3	30	junction_27	79.9915274942791	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGGAGTATGTGTGTG	-10	True	NA	12	True	ATTAAA	-12	NA	67873077	67884494	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_67873344_67875944_67876102_67876487_67876600_67876872_67876973_67877216_67877407_67877508_67877657_67877740_67877846_67878165_67878276_67878359_67878444_67878535_67878632_67878736_67878840_67878956_67879138_67879236_67879310_67879411_67879504_67879586_67879775_67879849_67879972_67880062_67880217_67880556_67880991_67881075_67881181_67881264_67881418_67881496_67881534_67881667_67881846_67881953_67882110_67882211_67882328_67882428_67882595_67882678_67882866_67882957_67883007_67883114_67883178_67883567_67883732_67883955
H1_mix_00031508	chr16	+	3907	1	FSM	ENSG00000263126.1	ENST00000572067.1	3907	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAAGCTCCTTCCTTTCTC	9047	False	NA	27	True	ATTAAA	-16	NA	67882460	67886367	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_67882500_67886400
H1_mix_00031509	chr16	+	604	3	NNC	ENSG00000188038.8	novel	626	3	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	38	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAAGCTCCTTCCTTTCTC	-8	True	NA	27	True	ATTAAA	-16	NA	67884884	67886367	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_67884983_67885742_67885855_67885973
H1_mix_00031510	chr16	+	626	3	FSM	ENSG00000188038.8	ENST00000339176.8	626	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	15.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGCTCCTTCCTTTCTCC	-8	True	NA	28	True	ATTAAA	-17	NA	67884884	67886368	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_67884983_67885721_67885855_67885973
H1_mix_00031514	chr16	+	2005	17	FSM	ENSG00000167264.18	ENST00000565263.6	1982	17	-23	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	19.5095129039656	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTGTGTCCTGGCATG	-1	True	NA	13	True	CATAAA	-1	NA	68023260	68079320	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_68023352_68025414_68025495_68038005_68038150_68049504_68049551_68053563_68053656_68054573_68054618_68056363_68056425_68061065_68061114_68066316_68066383_68066565_68066637_68070133_68070221_68070939_68071109_68074033_68074156_68075354_68075505_68076631_68076720_68078444_68078519_68078748
H1_mix_00031519	chr16	+	6345	11	FSM	ENSG00000072736.19	ENST00000349223.9	6328	11	-17	0	0	0	multi-exon	FALSE	canonical	3	23	junction_9	42.6895771822584	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTTAATCTGTCTGAGTG	-1	True	NA	11	True	AATAAA	-19	NA	68085440	68229258	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_68085785_68121986_68123122_68126447_68126611_68157868_68158069_68166842_68167016_68174373_68174515_68181474_68181531_68183239_68183367_68190767_68191776_68221195_68221285_68226349
H1_mix_00031523	chr16	+	6496	11	FSM	ENSG00000103064.15	ENST00000219343.11	6255	11	-267	26	-257	0	multi-exon	FALSE	canonical	3	71	junction_1	25.5765517613301	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACCAATAAATTCTTTTTG	72	False	NA	-20	True	NA	NA	NA	68264258	68301793	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_68264577_68266592_68266722_68274690_68275250_68287745_68287872_68290395_68290541_68291208_68291333_68291557_68291662_68294704_68294802_68296363_68296514_68296626_68296811_68297233
H1_mix_00031525	chr16	+	6320	12	FSM	ENSG00000103064.15	ENST00000566454.5	6308	12	-12	0	0	0	multi-exon	TRUE	canonical	3	21	junction_2	42.2941294795123	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTCTCTCTTCTTTAAT	17	True	NA	6	True	AATAAA	-16	NA	68264547	68301819	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_68264577_68266592_68266722_68273817_68273905_68274690_68275250_68287745_68287872_68290395_68290541_68291208_68291333_68291557_68291662_68294704_68294802_68296363_68296514_68296626_68296811_68297233
H1_mix_00031528	chr16	+	6300	11	NNC	ENSG00000103064.15	novel	658	4	NA	NA	1350	0	intron_retention	FALSE	canonical	1	1	junction_1	47.0909757809286	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTCTCTCTTCTTTAAT	12	False	NA	6	True	AATAAA	-16	NA	68267951	68301819	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_68268090_68273817_68273905_68274690_68275250_68287745_68287872_68290395_68290541_68291208_68291333_68291557_68291662_68294704_68294802_68296363_68296514_68296626_68296811_68297233
H1_mix_00031530	chr16	+	2276	18	NIC	ENSG00000132600.18	novel	3738	19	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	98	junction_1	59.827433500928	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGCTGGGGTTCTGAGTG	-11	True	NA	3	True	AATAAA	-8	NA	68311010	68357249	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_68311100_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347210_68347295_68347630_68347679_68348341_68348432_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
H1_mix_00031531	chr16	+	2189	16	FSM	ENSG00000132600.18	ENST00000691961.1	3416	16	-17	1244	1	0	multi-exon	FALSE	canonical	3	56	junction_11	83.7008960525513	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGCTGGGGTTCTGAGTG	-11	True	NA	3	True	AATAAA	-8	NA	68311010	68357249	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_68311100_68312041_68312177_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
H1_mix_00031535	chr16	+	2415	19	ISM	ENSG00000132600.18	ENST00000687654.1	4265	21	10	3593	1	0	5prime_fragment	FALSE	canonical	3	27	junction_1	75.4241504369509	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAGTGGCTCATGGCT	7	True	NA	13	True	AATAAA	-18	NA	68311028	68357259	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_68311112_68312041_68312177_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347210_68347295_68347630_68347679_68348341_68348432_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
H1_mix_00031536	chr16	+	2201	17	NIC	ENSG00000132600.18	novel	3738	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	83.4632216907543	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAGTGGCTCATGGCT	37	True	NA	13	True	AATAAA	-18	NA	68311058	68357259	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_68311100_68315896_68316075_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347210_68347295_68347630_68347679_68348341_68348432_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
H1_mix_00031537	chr16	+	2042	15	NIC	ENSG00000132600.18	novel	3416	16	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_10	76.0214792418725	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAGTGGCTCATGGCT	11	True	NA	13	True	AATAAA	-18	NA	68311032	68357259	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_68311100_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
H1_mix_00031538	chr16	+	4248	19	FSM	ENSG00000132600.18	ENST00000339507.9	4238	19	-10	0	5	0	multi-exon	FALSE	canonical	3	18	junction_1	76.8349401294187	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAGAAATTAAAAAAGTTT	40	False	NA	-23	True	AATACA	-9	NA	68311123	68358553	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_68311746_68312041_68312177_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347210_68347295_68347630_68347679_68348341_68348432_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
H1_mix_00031539	chr16	+	2302	17	FSM	ENSG00000132600.18	ENST00000568975.5	2996	17	694	0	9	0	multi-exon	FALSE	canonical	3	18	junction_13	74.4844782488271	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAGTGGCTCATGGCT	4757	False	NA	13	True	AATAAA	-18	NA	68315888	68357259	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347210_68347295_68347630_68347679_68348341_68348432_68352247_68352410_68353394_68353567_68355722_68355884_68356700_68356798_68357053
H1_mix_00031541	chr16	+	1848	3	FSM	ENSG00000132600.18	ENST00000568463.1	1848	3	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_2	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGCTGGGGTTCTGAGTG	2142	False	NA	3	True	AATAAA	-8	NA	68354328	68357249	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_68355884_68356700_68356798_68357053
H1_mix_00031547	chr16	+	3593	16	FSM	ENSG00000062038.15	ENST00000429102.6	3611	16	18	0	18	0	multi-exon	FALSE	canonical	3	37	junction_15	221.02900764882	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTGCCTGGGGAGTGAA	10	False	NA	13	True	ATTAAA	-13	NA	68645010	68699036	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_68645425_68645635_68645751_68676384_68676471_68678133_68678278_68678500_68678657_68678761_68678907_68679798_68679975_68680967_68681097_68682301_68682488_68684582_68684825_68685204_68685351_68687511_68687737_68691719_68691927_68695254_68695386_68695776_68695924_68698092
H1_mix_00031548	chr16	+	4590	15	FSM	ENSG00000062038.15	ENST00000542274.5	2746	15	-247	-1597	61	-3	multi-exon	TRUE	canonical	3	41	junction_1	218.891688806522	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGATGACTAATTCTGTA	24	False	NA	2	True	AATAAA	-13	NA	68645053	68700289	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_68645425_68676384_68676471_68678133_68678278_68678500_68678657_68678761_68678907_68679798_68679975_68680967_68681097_68682301_68682488_68684582_68684825_68685204_68685351_68687511_68687737_68691719_68691927_68695254_68695386_68695776_68695924_68698190
H1_mix_00031551	chr16	+	581	4	FSM	ENSG00000039068.20	ENST00000564745.1	581	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	482.773468846645	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGACACACCCCCTGTT	949	False	NA	NA	False	NA	NA	NA	68770947	68808747	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_68771106_68801669_68801894_68808423_68808568_68808692
H1_mix_00031555	chr16	+	4371	5	NIC	ENSG00000103044.11	novel	900	4	NA	NA	-108	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	15.8488958605955	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCGAAACTACTACTTTGT	426	False	NA	13	True	AATAAA	-22	NA	69106145	69117660	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_69106317_69106571_69106716_69109395_69110032_69113440_69113543_69114342
H1_mix_00031560	chr16	+	2188	17	FSM	ENSG00000141076.18	ENST00000314423.12	2188	17	0	0	0	0	multi-exon	FALSE	canonical	3	757	junction_1	72.6858609015536	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTAGTCATTATAAATGT	23	True	NA	NA	False	AATAAA	-16	NA	69132648	69169021	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_69132690_69133457_69133619_69136695_69136888_69137800_69137886_69139824_69139915_69143177_69143390_69150536_69150709_69150812_69150905_69153583_69153681_69154392_69154458_69155870_69155994_69157083_69157241_69160355_69160463_69163082_69163179_69165340_69165527_69167074_69167186_69168820
H1_mix_00031565	chr16	+	4129	11	FSM	ENSG00000132612.16	ENST00000254950.13	4106	11	-23	0	-23	0	multi-exon	FALSE	canonical	3	431	junction_8	32.9698346977961	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGATGCCCACCACAAAAGC	4	True	NA	NA	False	AATAAA	-19	NA	69311326	69326939	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_69311533_69316007_69316120_69316224_69316373_69318649_69318712_69318822_69318943_69319386_69319544_69320140_69320290_69320687_69320770_69321050_69321271_69322559_69322701_69324207
H1_mix_00031567	chr16	+	2329	2	FSM	ENSG00000132612.16	ENST00000566354.1	2329	2	0	0	0	0	multi-exon	FALSE	canonical	3	470	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGATCTCATCTTTCCTT	9836	False	NA	33	True	AATAAA	-25	NA	69321210	69325046	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_69322701_69324207
H1_mix_00031569	chr16	+	2055	5	FSM	ENSG00000132603.15	ENST00000254940.10	2055	5	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_3	28.9946115683587	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAACTTGATTGTGGCCTT	-12	True	NA	19	True	AATAAA	-30	NA	69339771	69343106	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_69339886_69340005_69340093_69340193_69340333_69341179_69341321_69341532
H1_mix_00031570	chr16	+	1887	4	FSM	ENSG00000132603.15	ENST00000254941.6	1887	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	204.43798298968	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAAACTTGATTGTGGCC	13	True	NA	17	True	AATAAA	-28	NA	69339796	69343104	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_69339886_69340005_69340093_69340193_69340333_69341532
H1_mix_00031578	chr16	+	4511	24	FSM	ENSG00000198373.13	ENST00000359154.7	4487	24	-24	0	-20	0	multi-exon	FALSE	canonical	3	138	junction_1	24.9852130182077	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGGTGTTGTTGTGGAT	NA	False	NA	14	True	AATAAA	-14	NA	69762307	69941739	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_69762392_69786995_69787081_69798681_69798830_69799173_69799296_69840125_69840264_69842023_69842121_69871803_69871932_69888038_69888250_69908760_69908851_69917708_69917884_69925429_69925485_69929447_69929530_69930129_69930259_69931151_69931228_69931508_69931581_69931801_69931891_69933969_69934130_69935852_69935987_69936311_69936453_69937117_69937239_69937547_69937653_69939026_69939124_69939340_69939414_69939840
H1_mix_00031581	chr16	+	8510	18	NIC	ENSG00000090857.14	novel	8549	19	NA	NA	-75	-4	intron_retention	FALSE	canonical	3	62	junction_1	15.6087545304896	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACGGCTGCTTGTGAAAT	21	False	NA	18	True	AATAAA	-18	NA	70114256	70162533	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_70114441_70120460_70120720_70127259_70127394_70128783_70128866_70128958_70129123_70130422_70130545_70131301_70131420_70132150_70132301_70136193_70136387_70138898_70139024_70142233_70142390_70142552_70142687_70143509_70143659_70144420_70144534_70146133_70146229_70148463_70148554_70153390_70153574_70156474
H1_mix_00031585	chr16	+	1719	10	FSM	ENSG00000157349.17	ENST00000393657.6	1717	10	-2	0	-2	0	multi-exon	FALSE	canonical	3	34	junction_1	185.897821396594	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTCATCTTTTAATTTG	-32	True	NA	43	True	AATACA	-19	NA	70299159	70333826	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_70299355_70315968_70316105_70317495_70317589_70324584_70324688_70325573_70325689_70329291_70329470_70329830_70330069_70331721_70331885_70332967_70333160_70333520
H1_mix_00031586	chr16	+	1770	9	FSM	ENSG00000157349.17	ENST00000562519.5	1790	9	20	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	241.495341569977	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATAGTGGTGGAAAGGG	-30	True	NA	NA	False	NA	NA	NA	70299161	70333972	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_70299355_70315968_70316105_70324584_70324688_70325573_70325689_70329291_70329470_70329830_70330069_70331721_70331885_70332967_70333160_70333520
H1_mix_00031587	chr16	+	1700	11	FSM	ENSG00000157349.17	ENST00000355992.7	1692	11	-8	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	178.443520476368	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGTTTCATCTTTTAAT	-6	True	NA	40	True	AATACA	-16	NA	70299185	70333823	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_70299355_70312608_70312658_70314901_70314956_70315968_70316105_70324584_70324688_70325573_70325689_70329291_70329470_70329830_70330069_70331721_70331885_70332967_70333160_70333520
H1_mix_00031603	chr16	+	2895	3	FSM	ENSG00000140832.11	ENST00000268485.8	2914	3	-23	42	0	-42	multi-exon	FALSE	canonical	3	83	junction_2	31.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACATGTATTAATTTTAGAA	2	True	NA	-35	True	NA	NA	NA	71626160	71636423	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_71626697_71629366_71629495_71634192
H1_mix_00031604	chr16	+	2217	3	FSM	ENSG00000140832.11	ENST00000299952.4	2214	3	-3	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	37.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTACGTGTTTTATACCTA	-4	True	NA	13	True	AATAAA	-20	NA	71626183	71641965	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_71626697_71629366_71629495_71640389
H1_mix_00031610	chr16	+	2277	9	FSM	ENSG00000182149.21	ENST00000378798.9	2255	9	-22	0	0	0	multi-exon	FALSE	canonical	3	111	junction_7	264.963411389195	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTCTCTACTGTTTGGT	5	True	NA	29	True	AATAAA	-19	NA	71895530	71929008	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_71895590_71915625_71915729_71916461_71916643_71917046_71917135_71920738_71920823_71921342_71921454_71922473_71922681_71924768_71924818_71927613
H1_mix_00031611	chr16	+	2368	10	FSM	ENSG00000182149.21	ENST00000329908.12	2356	10	-12	0	0	0	multi-exon	FALSE	canonical	3	27	junction_8	275.531316138183	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTCTACTGTTTGGTCA	5	True	NA	31	True	AATAAA	-21	NA	71895530	71929010	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_71895590_71915625_71915729_71916461_71916643_71917046_71917135_71920738_71920823_71921342_71921454_71922473_71922681_71923287_71923381_71924772_71924818_71927613
H1_mix_00031612	chr16	+	4541	10	FSM	ENSG00000182149.21	ENST00000378799.11	4561	10	0	20	0	-20	multi-exon	FALSE	canonical	3	661	junction_8	91.8244433419649	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGAGGTGTCAGCAAAAA	5	True	NA	NA	False	NA	NA	NA	71895530	71931179	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_71895590_71915625_71915729_71916461_71916643_71917046_71917135_71920738_71920823_71921342_71921454_71922473_71922681_71923287_71923381_71924768_71924818_71927613
H1_mix_00031625	chr16	+	5367	5	FSM	ENSG00000186187.12	ENST00000567962.5	1234	5	-315	-3818	6	852	multi-exon	FALSE	canonical	1	6	junction_4	216.554121410792	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGACTTCCAGGTAGCTGT	-10	True	NA	NA	False	NA	NA	NA	74999029	75111846	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_75000096_75093571_75093668_75104783_75104890_75106481_75106572_75107837
H1_mix_00031626	chr16	+	2046	2	FSM	ENSG00000186187.12	ENST00000568494.1	2046	2	0	0	0	0	multi-exon	FALSE	canonical	3	556	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATTATATAAAAA	NA	False	NA	-5	True	TTTAAA	-9	NA	75104797	75108004	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_75106572_75107732
H1_mix_00031627	chr16	+	5331	1	FSM	ENSG00000186187.12	ENST00000568844.1	5331	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGAGCGCCTCCTAGT	NA	False	NA	12	True	AATAAA	-20	NA	75105382	75110713	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_75105400_75110700
H1_mix_00031628	chr16	+	3287	4	FSM	ENSG00000184517.12	ENST00000570010.6	3287	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	2.05480466765633	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTCTTTGTATATG	4	True	NA	9	True	AATAAA	-15	NA	75148523	75172234	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_75148644_75152908_75152967_75166769_75166897_75169252
H1_mix_00031631	chr16	+	816	3	FSM	ENSG00000034713.8	ENST00000563744.1	791	3	-22	-3	-8	3	multi-exon	FALSE	canonical	2	24	junction_2	306.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGCCATGTCCTTTA	-22	True	NA	NA	False	AATAAA	-22	NA	75566366	75577884	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_75566521_75566851_75566908_75577278
H1_mix_00031638	chr16	+	6062	6	FSM	ENSG00000103111.15	ENST00000248248.8	5813	6	-249	0	0	0	multi-exon	FALSE	canonical	3	117	junction_2	9.21737489744233	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTACTGTGCTGGCCAT	-2	True	NA	14	True	AATAAA	-15	NA	77190940	77202398	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_77191259_77191475_77191634_77193450_77193778_77194334_77195155_77195534_77195683_77198107
H1_mix_00031647	chr16	+	6154	4	FSM	ENSG00000186153.18	ENST00000682609.1	6142	4	-12	0	-10	0	multi-exon	FALSE	canonical	3	87	junction_3	3.74165738677394	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGAGACTCCGTCTCAAAA	19	True	NA	NA	False	NA	NA	NA	78099439	78120560	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_78099886_78108422_78108488_78109777_78109836_78114975
H1_mix_00031648	chr16	+	2712	5	FSM	ENSG00000186153.18	ENST00000562214.5	654	5	0	-2058	0	564	multi-exon	FALSE	canonical	3	8	junction_4	36.5171192730204	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACTTAAACTAGTGGGAT	-30	True	NA	NA	False	NA	NA	NA	78099655	78121134	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_78099886_78108422_78108488_78109777_78109836_78114975_78115155_78118954
H1_mix_00031649	chr16	+	733	6	FSM	ENSG00000186153.18	ENST00000355860.7	710	6	-23	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	35.7513636103576	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTACATCTTCTTTTGTGG	-30	True	NA	NA	False	AATAAA	-21	NA	78099655	78278696	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_78099886_78108422_78108488_78109777_78109836_78114975_78115155_78164182_78164290_78278602
H1_mix_00031654	chr16	+	4009	11	FSM	ENSG00000166451.14	ENST00000305850.10	3928	11	-81	0	-74	0	multi-exon	FALSE	canonical	3	192	junction_7	456.452943905503	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCAGTGTGGTCTTTTGC	595	False	NA	28	True	AATAAA	-19	NA	81007132	81031485	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_81007278_81011929_81012111_81014135_81014182_81017325_81017386_81017757_81017835_81020099_81020277_81022596_81022699_81024714_81024779_81026525_81026639_81028170_81028298_81028568
H1_mix_00031662	chr16	+	2805	20	FSM	ENSG00000197943.11	ENST00000567980.5	2892	20	1	86	1	-86	multi-exon	TRUE	canonical	3	52	junction_18	10.404825217736	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATGGCTTCTAATGAAAA	-10	True	NA	NA	False	NA	NA	NA	81785746	81921524	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_81786183_81854443_81854588_81858262_81858357_81859115_81859164_81869213_81869299_81870851_81870936_81880909_81880954_81883268_81883342_81889171_81889274_81891471_81891591_81893708_81893795_81895806_81895928_81900611_81900781_81905402_81905508_81907684_81907775_81908415_81908592_81910519_81910721_81912596_81912717_81919483_81919665_81921197
H1_mix_00031665	chr16	+	3854	14	FSM	ENSG00000140945.17	ENST00000567109.6	7876	14	-8	4030	-4	1234	multi-exon	FALSE	canonical	0	0	junction_1	3.59815863493123	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTCTCTGATTTCTATCT	-7	True	NA	NA	False	AATAAA	-34	NA	82626960	83796610	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_82627138_82858361_82858474_83032009_83032219_83125384_83125502_83217344_83217498_83344861_83345007_83486476_83486656_83602453_83602595_83670789_83670973_83678207_83678462_83748107_83748251_83779967_83780202_83783253_83783473_83795022
H1_mix_00031669	chr16	+	3194	5	Fusion	ENSG00000140961.14_ENSG00000103150.7	novel	13054	5	NA	NA	25	-2583	multi-exon	FALSE	canonical	2	4	junction_4	63.1446751515914	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATGAATGAGATATTTT	22	True	NA	-1	True	NA	NA	NA	83899139	83948569	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr16_+_83899673_83906986_83907100_83908125_83908283_83912217_83912368_83946328
H1_mix_00031672	chr16	+	2024	11	NIC	ENSG00000103154.10	novel	1996	13	NA	NA	347	0	intron_retention	FALSE	canonical	3	13	junction_3	7.98060148109151	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGCTCTGTGTCTGT	85	False	NA	5	True	AATAAA	-16	NA	83968590	84002776	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_83968850_83972150_83972176_83978443_83978553_83981029_83981128_83990493_83990631_83994301_83994421_83994608_83994689_83997215_83997270_83998204_83998318_84000723_84000802_84001824
H1_mix_00031677	chr16	+	507	1	FSM	ENSG00000103175.11	ENST00000622779.1	4177	1	3658	12	3658	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAACCAAATAAGATGCC	9800	False	NA	NA	False	NA	NA	NA	84329321	84329828	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_84329300_84329800
H1_mix_00031678	chr16	+	4338	27	FSM	ENSG00000064270.13	ENST00000262429.9	3374	27	-40	-924	-29	924	multi-exon	TRUE	canonical	2	8	junction_10	4.65813534067775	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTACTTCAAGTCTACG	-29	True	NA	NA	False	GATAAA	-6	NA	84368497	84465111	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_84368715_84398498_84398610_84405127_84405245_84408404_84408495_84410567_84410604_84410703_84410766_84415482_84415592_84422389_84422540_84422628_84422698_84423187_84423264_84425734_84425802_84439165_84439291_84439426_84439525_84440856_84440959_84442509_84442600_84446328_84446431_84448532_84448690_84451920_84452092_84453137_84453236_84453320_84453372_84454817_84454985_84459119_84459189_84459269_84459387_84460653_84460802_84461713_84461813_84461987_84462130_84463613
H1_mix_00031681	chr16	+	2618	3	FSM	ENSG00000135686.13	ENST00000564159.1	2618	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	60.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATATCTTGCTTGAATAAC	9383	False	NA	17	True	ATTAAA	-17	NA	84657902	84662309	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_84659631_84659759_84659918_84661577
H1_mix_00031691	chr16	+	7140	15	FSM	ENSG00000131149.19	ENST00000393243.5	7140	15	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_1	36.6037803333737	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGGAAAATCTTTTTTAT	36	False	NA	17	True	AATAAA	-19	NA	85613351	85676204	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_85613399_85648551_85648752_85654277_85654451_85654793_85654992_85655725_85655918_85656342_85656666_85657276_85657605_85661145_85661766_85662980_85663094_85663343_85663615_85665014_85665129_85665975_85666348_85668139_85668425_85670994_85671099_85672404
H1_mix_00031693	chr16	+	298	1	FSM	ENSG00000263968.2	ENST00000577658.2	298	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAATAAGCTGGAAAAAC	4975	False	NA	NA	False	NA	NA	NA	85659377	85659675	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_85659400_85659700
H1_mix_00031695	chr16	+	487	4	FSM	ENSG00000131143.10	ENST00000566115.5	471	4	-16	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	2026.80410718177	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCGAGTGTGGGTATTGAA	7	False	NA	NA	False	NA	NA	NA	85799621	85805096	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_85799753_85801204_85801279_85804539_85804662_85804936
H1_mix_00031696	chr16	+	2313	3	FSM	ENSG00000131143.10	ENST00000568339.5	2271	3	0	-42	0	0	multi-exon	FALSE	canonical	3	4307	junction_1	465.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAACAATAGGTTTCTC	7	False	NA	-7	True	AATGAA	-6	NA	85799621	85807044	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_85799753_85801204_85801279_85804936
H1_mix_00031697	chr16	+	561	3	FSM	ENSG00000131143.10	ENST00000567241.5	561	3	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_2	2062	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGGAGGTAGCCTCTCAG	-2	True	NA	NA	False	NA	NA	NA	85799653	85805328	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_85799753_85801204_85801279_85804940
H1_mix_00031700	chr16	+	883	5	FSM	ENSG00000131143.10	ENST00000562336.5	873	5	-10	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	2295.4336600085	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAACAATAGGTTTCTC	-7	True	NA	-7	True	AATGAA	-6	NA	85799682	85807044	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_85799885_85801204_85801279_85804936_85805105_85805732_85805865_85806737
H1_mix_00031701	chr16	+	772	5	FSM	ENSG00000131143.10	ENST00000561569.5	716	5	-14	-42	0	0	multi-exon	FALSE	canonical	3	27	junction_1	2370.22629457611	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAACAATAGGTTTCTC	-7	True	NA	-7	True	AATGAA	-6	NA	85799682	85807044	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_85799753_85801183_85801279_85804936_85805105_85805732_85805865_85806737
H1_mix_00031702	chr16	+	709	5	NIC	ENSG00000131143.10	novel	763	5	NA	NA	3	-1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	2303.62545783814	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTTTGTGATCAGTTCTT	-4	True	NA	30	True	AATAAA	-18	NA	85799685	85807001	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_85799753_85801204_85801279_85804936_85805109_85805732_85805865_85806737
H1_mix_00031704	chr16	+	775	5	FSM	ENSG00000131143.10	ENST00000253452.8	763	5	-12	0	0	0	multi-exon	FALSE	canonical	3	4307	junction_1	574.018891239652	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTCTGGAGTAAATATATT	-7	True	NA	17	True	ATTAAA	-19	NA	85799682	85807068	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_85799753_85801204_85801279_85804936_85805105_85805732_85805865_85806737
H1_mix_00031706	chr16	+	1235	3	FSM	ENSG00000131143.10	ENST00000564648.1	1235	3	0	0	0	0	multi-exon	FALSE	canonical	3	5238	junction_1	342	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACCACTGCTAATAAATGA	920	False	NA	-4	True	NA	NA	NA	85801201	85806967	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_85801279_85804936_85805865_85806737
H1_mix_00031707	chr16	+	3988	1	FSM	ENSG00000131143.10	ENST00000569997.1	3946	1	0	-42	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAACAATAGGTTTCTC	2775	False	NA	-7	True	AATGAA	-6	NA	85803056	85807044	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_85803100_85807000
H1_mix_00031714	chr16	+	679	2	FSM	ENSG00000154118.13	ENST00000301008.5	1030	2	352	-1	352	1	multi-exon	FALSE	canonical	3	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGCTCTAGTCCTCCCC	238	False	NA	4	True	AATAAA	-14	NA	87603238	87604628	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_87603529_87604239
H1_mix_00031716	chr16	+	2285	13	FSM	ENSG00000172530.21	ENST00000393208.6	2283	13	-2	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_8	39.5534097420465	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCTTACGCTTTTCCTC	-25	True	NA	17	True	AATAAA	-18	NA	87951431	88077318	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_87951516_87975047_87975186_87981035_87981128_87984059_87984260_88006089_88006266_88018427_88018668_88027482_88027651_88033108_88033246_88035322_88035395_88037972_88038012_88065266_88065333_88072068_88072213_88076589
H1_mix_00031717	chr16	+	2172	12	FSM	ENSG00000172530.21	ENST00000355022.8	2164	12	-8	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_8	36.4170062897465	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCTTACGCTTTTCCTC	22	True	NA	17	True	AATAAA	-18	NA	87951478	88077318	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_87951516_87975047_87975186_87981035_87981128_87984059_87984260_88006089_88006266_88018427_88018668_88027482_88027651_88033108_88033246_88035322_88035395_88037972_88038012_88072068_88072213_88076589
H1_mix_00031718	chr16	+	2344	14	NIC	ENSG00000172530.21	novel	2398	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_12	29.4528004716241	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGCCTTACGCTTTTCC	22	True	NA	15	True	AATAAA	-16	NA	87951478	88077316	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_87951516_87975047_87975186_87981035_87981128_87984059_87984260_88004294_88004412_88006089_88006266_88018427_88018668_88027482_88027651_88033108_88033246_88035331_88035395_88037972_88038012_88065266_88065333_88072068_88072213_88076589
H1_mix_00031723	chr16	+	3296	5	FSM	ENSG00000158545.16	ENST00000566496.5	1949	5	-1351	4	1023	0	multi-exon	FALSE	canonical	3	215	junction_1	23.8681272830526	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGGTCTCCTAAAATAAAA	NA	False	NA	12	True	NA	NA	NA	88625710	88631930	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_88627783_88627919_88628120_88628757_88628855_88630484_88630582_88631100
H1_mix_00031724	chr16	+	1068	5	FSM	ENSG00000158545.16	ENST00000565583.1	1068	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	107.008177257628	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGGTCTCCTAAAATAAAA	NA	False	NA	12	True	NA	NA	NA	88627921	88631930	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_88628120_88628757_88628855_88630484_88630582_88631100_88631340_88631493
H1_mix_00031726	chr16	+	4787	1	FSM	ENSG00000260630.8	ENST00000567997.1	2048	1	-2740	1	-2740	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTGAATTCTGCAACAGCT	NA	False	NA	11	True	AATAAA	-12	NA	88682392	88687179	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_88682400_88687200
H1_mix_00031730	chr16	+	594	4	FSM	ENSG00000174177.13	ENST00000565071.1	894	4	0	300	0	-300	multi-exon	FALSE	canonical	3	142	junction_2	6.12825877028341	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGGCCCACTCTCAGATGT	46	False	NA	NA	False	NA	NA	NA	88706544	88710608	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_88706599_88707135_88707211_88709937_88710017_88710222
H1_mix_00031733	chr16	+	2664	10	FSM	ENSG00000167513.9	ENST00000301019.9	2664	10	0	0	0	0	multi-exon	TRUE	canonical	3	424	junction_1	50.3265877255628	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGCAGAAGAGCCCTCG	-13	True	NA	18	True	AATAAA	-20	NA	88803788	88809258	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_88804060_88804544_88804668_88804761_88804899_88805439_88805638_88805723_88805870_88806020_88806122_88806485_88806675_88807050_88807204_88807280_88807483_88808114
H1_mix_00031735	chr16	+	1088	5	FSM	ENSG00000167515.10	ENST00000565205.5	1084	5	-4	0	0	0	multi-exon	FALSE	canonical	3	106	junction_2	421.829645710208	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGTGACCATGTGGGTC	-6	True	NA	NA	False	NA	NA	NA	88857126	88861287	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_88857184_88858618_88858790_88859344_88859751_88859892_88859973_88860913
H1_mix_00031736	chr16	+	856	5	FSM	ENSG00000167515.10	ENST00000567895.5	854	5	-2	0	-2	0	multi-exon	FALSE	canonical	3	25	junction_1	485.410650892623	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCCCAGAACCAGCCTA	NA	False	NA	NA	False	NA	NA	NA	88857083	88861351	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_88857184_88858641_88858792_88859662_88859751_88859892_88859973_88860913
H1_mix_00031738	chr16	+	507	4	FSM	ENSG00000167515.10	ENST00000567312.5	499	4	-8	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	455.321376124113	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGGCTTTTTCCTTCCG	-6	True	NA	28	True	ACTAAA	-16	NA	88857126	88861112	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_88857184_88858618_88858790_88859892_88859973_88860913
H1_mix_00031741	chr16	+	1396	8	NIC	ENSG00000176715.17	novel	2247	10	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	3	15	junction_3	38.6475439460417	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGCCCCTGTCCCACGC	-9	True	NA	3	True	AAAACA	-18	NA	89093892	89154583	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_89093997_89102603_89102760_89112091_89112247_89120800_89120914_89133135_89133263_89145266_89145402_89145937_89146050_89154089
H1_mix_00031742	chr16	+	6452	1	FSM	ENSG00000176715.17	ENST00000393145.5	7020	1	571	-3	571	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGTCCCACGCCGTCTG	NA	False	NA	9	True	AAAACA	-24	NA	89148137	89154589	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89148100_89154600
H1_mix_00031747	chr16	+	2298	10	FSM	ENSG00000197912.16	ENST00000341316.6	2288	10	-10	0	0	0	multi-exon	FALSE	canonical	3	45	junction_9	205.01424220325	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCAGTGCTTGCCGTG	-1	True	NA	14	True	AATAAA	-16	NA	89508400	89537721	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89508601_89510489_89510593_89512947_89513038_89524005_89524248_89526328_89526469_89529476_89529580_89530682_89530809_89531903_89532067_89532462_89532637_89536764
H1_mix_00031748	chr16	+	4599	17	FSM	ENSG00000197912.16	ENST00000644225.1	4581	17	-18	0	-10	0	multi-exon	FALSE	canonical	0	0	junction_16	171.383604360948	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTAGTTGGAAAATCTAC	NA	False	NA	2	True	AATAAA	-2	NA	89508382	89557747	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89508601_89510489_89510593_89512947_89513038_89524005_89524248_89526328_89526469_89529476_89529580_89530682_89530809_89531903_89532067_89532462_89532637_89544647_89544773_89546657_89546761_89548002_89548114_89550493_89550610_89552978_89553136_89553793_89553961_89554485_89556086_89556886
H1_mix_00031749	chr16	+	4188	16	FSM	ENSG00000197912.16	ENST00000645977.1	4168	16	-20	0	-10	0	multi-exon	FALSE	canonical	3	574	junction_8	55.9974602598685	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAATCTACATTTGCAT	NA	False	NA	10	True	AATAAA	-10	NA	89508382	89557755	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89508601_89510489_89510593_89512947_89513038_89524005_89524248_89526328_89526469_89529476_89530809_89531903_89532067_89532462_89532637_89544647_89544773_89546657_89546761_89548002_89548114_89550493_89550610_89552978_89553136_89553793_89553961_89554485_89554564_89556886
H1_mix_00031750	chr16	+	3095	17	FSM	ENSG00000197912.16	ENST00000645818.2	3076	17	-20	1	-10	-1	multi-exon	FALSE	canonical	3	574	junction_9	58.206528843421	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTGCATTGTCTGGCCA	NA	False	NA	20	True	AATAAA	-20	NA	89508382	89557765	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89508601_89510489_89510593_89512947_89513038_89524005_89524248_89526328_89526469_89529476_89529580_89530682_89530809_89531903_89532067_89532462_89532637_89544647_89544773_89546657_89546761_89548002_89548114_89550493_89550610_89552978_89553136_89553793_89553961_89554485_89554564_89556886
H1_mix_00031752	chr16	+	1492	5	FSM	ENSG00000197912.16	ENST00000562775.2	1534	5	-9	51	0	-51	multi-exon	FALSE	canonical	3	679	junction_4	36.8985094549902	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGACTGTGCTCTTTGATG	143	False	NA	NA	False	NA	NA	NA	89508544	89527329	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89508601_89510489_89510593_89512947_89513038_89524005_89524248_89526328
H1_mix_00031754	chr16	+	4754	4	FSM	ENSG00000197912.16	ENST00000643734.1	4754	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	325.855114361514	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATCACAGATTTACCTAA	7567	False	NA	NA	False	NA	NA	NA	89537147	89548291	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89541385_89544647_89544773_89546657_89546761_89548002
H1_mix_00031757	chr16	+	3395	8	FSM	ENSG00000197912.16	ENST00000645392.1	3384	8	-11	0	-11	0	multi-exon	FALSE	canonical	3	618	junction_4	33.5662610004603	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTAGTTGGAAAATCTACA	NA	False	NA	3	True	AATAAA	-3	NA	89542971	89557748	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89544773_89546657_89546761_89548002_89548114_89550493_89550610_89552978_89553136_89553793_89553961_89554485_89554564_89556886
H1_mix_00031758	chr16	+	3475	8	FSM	ENSG00000197912.16	ENST00000643409.1	3475	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	232.100259828043	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAATCTACATTTGCAT	NA	False	NA	10	True	AATAAA	-10	NA	89543684	89557755	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89544773_89545871_89546761_89548002_89548114_89550493_89550610_89552978_89553136_89553793_89553961_89554485_89554564_89556886
H1_mix_00031759	chr16	+	3729	5	FSM	ENSG00000197912.16	ENST00000561702.6	3729	5	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_1	36.6153997656724	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACATTTGCATTGTCTGG	NA	False	NA	17	True	AATAAA	-17	NA	89548158	89557762	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89550610_89552978_89553136_89553793_89553961_89554485_89554564_89556886
H1_mix_00031760	chr16	+	4252	4	FSM	ENSG00000197912.16	ENST00000647476.1	4252	4	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_1	41.9629466182832	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTAGTTGGAAAATCTAC	NA	False	NA	2	True	AATAAA	-2	NA	89549943	89557747	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89550610_89552978_89553136_89553793_89553961_89554485
H1_mix_00031766	chr16	+	879	4	FSM	ENSG00000167526.14	ENST00000399461.8	879	4	0	0	0	0	multi-exon	FALSE	canonical	3	16146	junction_3	770.176747391287	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGCAGTCATGCTGGGTC	190	False	NA	2	True	AATAAA	-24	NA	89560903	89563066	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89561369_89561577_89561752_89562334_89562392_89562883
H1_mix_00031771	chr16	+	2472	2	NNC	ENSG00000178773.15	novel	2442	15	NA	NA	543	0	intron_retention	FALSE	canonical	3	29	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTTGTGCCTTCAGTC	552	False	NA	20	True	AATAAA	-20	NA	89594642	89597246	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_89596352_89596483
H1_mix_00031779	chr16	+	1237	7	FSM	ENSG00000185324.22	ENST00000507205.5	1215	7	-22	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	173.117253135941	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGCAGAGGGTGGTCCG	-16	True	NA	NA	False	NA	NA	NA	89686669	89694040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89686760_89689251_89689307_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273
H1_mix_00031783	chr16	+	903	11	FSM	ENSG00000185324.22	ENST00000564192.5	897	11	-6	0	0	0	multi-exon	FALSE	canonical	3	17	junction_9	138.465735833816	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAGCCCTACAACAACCT	14	True	NA	NA	False	NA	NA	NA	89686699	89694972	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89686760_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693327_89693397_89693468_89694172_89694233_89694568_89694789_89694930
H1_mix_00031784	chr16	+	1714	13	NIC	ENSG00000185324.22	novel	1767	13	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	132	junction_1	89.3144802867312	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTCACCAGCGTTTA	18	True	NA	27	True	GATAAA	-16	NA	89686703	89696354	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_89686760_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693327_89693397_89693468_89694172_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695594
H1_mix_00031789	chr16	+	1756	4	FSM	ENSG00000261373.1	ENST00000562866.1	1753	4	-3	0	-3	0	multi-exon	FALSE	canonical	0	0	junction_3	28.1937739383873	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCCTCTCCTTGCCAGTT	2	True	NA	10	True	NA	NA	NA	89711852	89718165	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89712223_89712688_89712819_89716470_89716905_89717343
H1_mix_00031797	chr16	+	2195	13	FSM	ENSG00000204991.11	ENST00000393062.6	2172	13	-23	0	1	0	multi-exon	FALSE	canonical	3	5	junction_12	9.3760184631976	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTATATATTTATATACAC	-7	True	NA	12	True	AATATA	-9	NA	89828475	89870391	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89828795_89845321_89845366_89850303_89850661_89854285_89854367_89854486_89854652_89855599_89855687_89856112_89856237_89858337_89858508_89859164_89859355_89860682_89860796_89863475_89863611_89863793_89863862_89870049
H1_mix_00031799	chr16	+	2391	19	FSM	ENSG00000141002.20	ENST00000263347.11	2377	19	-14	0	2	0	multi-exon	TRUE	canonical	3	46	junction_17	98.3242305893499	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTCCGCACCTTCTCCT	-16	True	NA	37	True	TATAAA	-19	NA	89873571	89911384	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89873860_89883350_89883513_89884581_89884657_89885847_89885967_89887651_89887718_89892192_89892276_89893727_89893859_89895037_89895138_89895989_89896084_89898556_89898650_89898766_89898873_89900634_89900795_89904117_89904206_89904937_89905097_89906193_89906285_89907242_89907323_89908965_89909084_89910590_89910664_89911079
H1_mix_00031804	chr16	+	1535	2	FSM	ENSG00000141002.20	ENST00000567171.1	1535	2	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCTCTGCCGTCCGCACCT	2157	False	NA	31	True	TATAAA	-13	NA	89909427	89911378	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89910664_89911079
H1_mix_00031806	chr16	+	1737	4	FSM	ENSG00000258947.8	ENST00000315491.12	1706	4	-36	5	-32	0	multi-exon	FALSE	canonical	3	738	junction_1	35.5902608401044	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGCTTGGTGCCAGAGA	1380	False	NA	30	True	AATAAA	-18	NA	89923305	89936092	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89923459_89932570_89932680_89933467_89933579_89934728
H1_mix_00031808	chr16	+	1244	6	NIC	ENSG00000140995.17	novel	852	6	NA	NA	-301	-1	combination_of_known_junctions	FALSE	canonical	3	63	junction_1	190.884886777345	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGGTGTGTCTAGTTTG	NA	False	NA	NA	False	ATTAAA	-10	NA	89948395	89959362	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_89948815_89949419_89949514_89954242_89954377_89955168_89955267_89957510_89957661_89959013
H1_mix_00031809	chr16	+	850	5	FSM	ENSG00000140995.17	ENST00000610455.4	816	5	-34	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	133.507256357098	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTGTGTCTAGTTTGT	NA	False	NA	NA	False	ATTAAA	-11	NA	89948696	89959363	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89948815_89954242_89954377_89955168_89955267_89957510_89957661_89959013
H1_mix_00031811	chr16	+	5193	13	FSM	ENSG00000140995.17	ENST00000563594.6	3620	13	-24	-1549	0	1549	multi-exon	FALSE	canonical	3	94	junction_10	163.028861623402	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCTGTAGTCCCAACAC	NA	False	NA	NA	False	NA	NA	NA	89948730	89969609	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89948815_89949416_89949514_89954242_89954377_89955168_89955267_89957510_89957661_89959013_89959156_89960930_89961096_89961736_89961865_89962011_89962126_89963362_89963444_89964169_89964311_89964465_89964576_89965860
H1_mix_00031813	chr16	+	872	6	FSM	ENSG00000140995.17	ENST00000418391.6	852	6	-20	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	175.302025088132	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTGTCTAGTTTGTACA	9	True	NA	NA	False	ATTAAA	-14	NA	89948774	89959366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89948815_89949416_89949514_89954242_89954377_89955168_89955267_89957510_89957661_89959013
H1_mix_00031815	chr16	+	3503	12	NIC	ENSG00000140995.17	novel	3725	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	94	junction_9	164.702185526955	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTGTGTGTGTGGTGA	9	True	NA	5	True	ATTAAA	-14	NA	89948774	89968060	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_89948815_89954242_89954377_89955168_89955267_89957510_89957661_89959013_89959156_89960930_89961096_89961736_89961865_89962011_89962126_89963362_89963444_89964169_89964311_89964465_89964576_89965860
H1_mix_00031816	chr16	+	4360	13	FSM	ENSG00000140995.17	ENST00000268676.11	3725	13	0	-635	0	635	multi-exon	FALSE	canonical	3	40	junction_2	173.426177057816	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGTGAGGTCAAACTTTT	9	True	NA	NA	False	NA	NA	NA	89948774	89968695	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89948815_89949416_89949639_89954242_89954377_89955168_89955267_89957510_89957661_89959013_89959156_89960930_89961096_89961736_89961865_89962011_89962126_89963362_89963444_89964169_89964311_89964465_89964576_89965860
H1_mix_00031818	chr16	+	550	2	FSM	ENSG00000140995.17	ENST00000562044.1	535	2	-15	0	-15	0	multi-exon	FALSE	canonical	3	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGTGTCTAGTTTGTAC	-3	True	NA	NA	False	ATTAAA	-13	NA	89958335	89959365	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89958534_89959013
H1_mix_00031820	chr16	+	4654	3	FSM	ENSG00000140995.17	ENST00000564379.1	2354	3	-1873	-427	-86	0	multi-exon	FALSE	canonical	3	152	junction_1	5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTGTGTGTGTGGTGA	3628	False	NA	5	True	ATTAAA	-14	NA	89961966	89968060	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89964311_89964465_89964576_89965860
H1_mix_00031826	chr16	+	526	4	FSM	ENSG00000223959.9	ENST00000421780.5	526	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	21.6999743983464	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTACTCGTTAATGTGTTT	5086	False	NA	18	True	AGTAAA	-21	NA	89977693	89984701	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89977803_89980241_89980337_89981772_89981924_89984530
H1_mix_00031834	chr16	-	1935	6	NNC	ENSG00000234769.7	novel	1246	9	NA	NA	683	338	intron_retention	FALSE	canonical	3	30	junction_1	85.1788706194206	75	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAACGTCTCGGGGTCAG	NA	False	NA	NA	False	AATAAA	-21	NA	17385	14042	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_14512_14651_14721_15480_16449_16540_16739_16915_17052_17290
H1_mix_00031835	chr16	-	261	1	Antisense	novelGene_ENSG00000233614.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGTGCTTTTAATAAAGG	1361	False	NA	NA	False	AATAAA	-19	NA	14341	14080	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr16_-_14100_14300
H1_mix_00031836	chr16	-	750	4	NNC	ENSG00000161980.6	novel	1372	3	NA	NA	12	23020	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	597.867878381169	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAAACAAAATCAAAAAC	21	True	NA	NA	False	AAAAAG	-1	NA	53596	23386	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_23419_47048_47558_51557_51646_53475
H1_mix_00031837	chr16	-	761	4	NNC	ENSG00000161980.6	novel	1372	3	NA	NA	0	23020	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	597.867878381169	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAAACAAAATCAAAAAC	9	True	NA	NA	False	AAAAAG	-1	NA	53608	23386	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_23418_47048_47558_51557_51646_53475
H1_mix_00031838	chr16	-	2683	3	FSM	ENSG00000161980.6	ENST00000293860.6	1372	3	-84	-1227	-84	1227	multi-exon	FALSE	canonical	3	1242	junction_2	25.5	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAAATTTCTTCCTTGTG	NA	False	NA	NA	False	GGGGCT	-19	NA	53692	45179	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_47558_51557_51646_53475
H1_mix_00031839	chr16	-	2978	18	NNC	ENSG00000007384.15	novel	2992	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	53	junction_12	57.0922885490213	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGGCTTCCCTATCCTTC	18	True	NA	-6	True	AATAAA	-35	NA	72621	58058	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_58760_58973_59128_59248_59350_59418_59495_59731_59827_60215_60280_60438_60540_61119_61282_61384_61460_61584_61697_61797_62053_62537_62692_62774_62898_62972_63183_63586_63801_64698_64830_64898_65040_72512
H1_mix_00031840	chr16	-	2990	18	FSM	ENSG00000007384.15	ENST00000262316.10	2992	18	0	2	0	1	multi-exon	FALSE	canonical	1	61	junction_2	50.8306095286285	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCAGGGCTTCCCTATCCT	8	True	NA	-8	True	AATAAA	-33	NA	72631	58060	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_58760_58973_59128_59248_59350_59418_59495_59731_59827_60215_60280_60438_60540_61119_61282_61384_61460_61584_61697_61797_62053_62537_62696_62774_62898_62972_63183_63586_63801_64698_64830_64898_65040_72512
H1_mix_00031841	chr16	-	556	3	FSM	ENSG00000007384.15	ENST00000482904.1	556	3	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_2	7	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGTGCAGCAGGAGAACT	NA	False	NA	NA	False	NA	NA	NA	62206	61424	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_61460_61584_61697_61797
H1_mix_00031843	chr16	-	1843	12	NIC	ENSG00000103148.17	novel	2784	12	NA	NA	152	0	combination_of_known_junctions	TRUE	canonical	3	12	junction_11	56.2000558806816	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTAAGTTCCCGTCCAT	514	False	NA	-17	True	GATAAA	-17	NA	138183	84270	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_84596_86667_86871_88697_88891_89712_89903_92595_92726_93218_93326_98144_98302_100371_100510_110524_110607_112621_112776_119125_119256_138149
H1_mix_00031844	chr16	-	2945	13	ISM	ENSG00000103148.17	ENST00000611875.5	3128	14	490	0	152	0	3prime_fragment	FALSE	canonical	3	68	junction_10	38.156385078021	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGAAGTGGAGCCTCCCT	514	False	NA	NA	False	NA	NA	NA	138183	85385	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_86871_88697_88891_89712_89903_92595_92726_93218_93326_98144_98302_100371_100510_110524_110607_112621_112776_117300_117376_119125_119256_130521_130592_138149
H1_mix_00031845	chr16	-	3128	14	FSM	ENSG00000103148.17	ENST00000611875.5	3128	14	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_13	47.2016948848238	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGAAGTGGAGCCTCCCT	-21	True	NA	NA	False	NA	NA	NA	138673	85385	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_86871_88697_88891_89712_89903_92595_92726_93218_93326_98144_98302_100371_100510_110524_110607_112621_112776_117300_117376_119125_119256_130521_130592_138149_138335_138641
H1_mix_00031846	chr16	-	3199	12	FSM	ENSG00000103148.17	ENST00000399953.7	2784	12	0	-415	0	0	multi-exon	FALSE	canonical	3	65	junction_9	36.7558394753431	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGAAGTGGAGCCTCCCT	185	False	NA	NA	False	NA	NA	NA	138512	85385	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_86871_88697_88891_89712_89903_92595_92726_93218_93326_98144_98302_100371_100510_110524_110607_112621_112776_119125_119256_130521_130592_138149
H1_mix_00031849	chr16	-	711	1	FSM	ENSG00000268836.1	ENST00000595428.1	547	1	-165	1	-165	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	323	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGTTGTTTTTTGCTTTT	NA	False	NA	-3	True	CATAAA	-17	NA	186459	185748	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_185700_186500
H1_mix_00031850	chr16	-	1526	11	FSM	ENSG00000007392.17	ENST00000629543.2	1520	11	0	-6	0	0	multi-exon	FALSE	canonical	3	69	junction_9	185.28356645963	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGCGTAGAGGCTTTT	-19	True	NA	-10	True	AATAAA	-44	NA	229450	188968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_189340_189967_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_220648_220748_227241_227337_228332_228403_229278
H1_mix_00031851	chr16	-	1506	10	FSM	ENSG00000007392.17	ENST00000397783.5	1504	10	0	-2	0	0	multi-exon	FALSE	canonical	3	123	junction_1	140.795973567569	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGCGTAGAGGCTTTT	5216	False	NA	-10	True	AATAAA	-44	NA	229463	188968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_189340_189930_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_220648_220748_227241_227337_229278
H1_mix_00031852	chr16	-	2097	9	FSM	ENSG00000007392.17	ENST00000337351.8	2097	9	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_8	72.4530020081984	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGCGTAGAGGCTTTT	5216	False	NA	-10	True	AATAAA	-44	NA	229463	188968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_220648_220748_227241_227337_229278
H1_mix_00031853	chr16	-	1434	10	FSM	ENSG00000007392.17	ENST00000293872.13	1434	10	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_9	70.1465837363199	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGCGGGGGGTTTCTGCT	-18	True	NA	-31	True	AATAAA	-23	NA	229449	188989	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_189340_189967_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_220648_220748_227241_227337_229278
H1_mix_00031859	chr16	-	361	3	FSM	ENSG00000076344.16	ENST00000472466.1	361	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACCCCCACCCACCCAGC	7645	False	NA	NA	False	NA	NA	NA	275567	274938	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_275083_275282_275334_275401
H1_mix_00031860	chr16	-	3706	11	FSM	ENSG00000103126.15	ENST00000262320.8	3707	11	0	1	0	0	multi-exon	FALSE	canonical	3	58	junction_2	72.4855847738017	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCTGTGGTGTGTCTT	1	True	NA	-5	True	AATAAA	-17	NA	352723	287440	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_288249_289439_289608_291189_291298_293487_293719_297055_297227_297721_298252_304303_304442_309972_310070_314542_314684_346147_347107_352368
H1_mix_00031861	chr16	-	3325	10	FSM	ENSG00000103126.15	ENST00000354866.7	3324	10	0	-1	0	0	multi-exon	FALSE	canonical	3	123	junction_9	41.4302924899459	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCTGTGGTGTGTCTTC	2824	False	NA	-4	True	AATAAA	-18	NA	352449	287439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_288249_289439_289608_293487_293719_297055_297227_297721_298252_304303_304442_309972_310070_314542_314684_346147_347107_352368
H1_mix_00031863	chr16	-	1524	6	FSM	ENSG00000086504.18	ENST00000199706.13	1524	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	674.004747757759	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAAGTGTTGGGATTACA	-4	True	NA	-47	True	NA	NA	NA	370538	366968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_367783_368327_368415_368500_368636_369067_369221_369930_370226_370498
H1_mix_00031864	chr16	-	1512	5	FSM	ENSG00000086504.18	ENST00000483764.5	1512	5	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_4	521.5363721736	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGCTTTGAGGACTGGT	-2	True	NA	-11	True	AGTAAA	-26	NA	370509	367383	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_367783_368327_368415_368500_369221_369930_370226_370498
H1_mix_00031865	chr16	-	1467	4	FSM	ENSG00000086504.18	ENST00000469744.1	1467	4	0	0	0	0	multi-exon	FALSE	canonical	3	1420	junction_3	75.2374020462341	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCGGGAGCGAGTAAAGT	0	True	NA	-54	True	NA	NA	NA	370234	367426	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_367783_368327_368415_368500_369221_369930
H1_mix_00031866	chr16	-	1087	6	FSM	ENSG00000086504.18	ENST00000389675.6	865	6	7	-229	0	0	multi-exon	FALSE	canonical	0	0	junction_3	724.456320284391	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGCTTTGAGGACTGGT	5	True	NA	-11	True	AGTAAA	-26	NA	370502	367383	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_367783_368327_368415_368500_368636_369067_369221_369930_370226_370484
H1_mix_00031868	chr16	-	722	5	FSM	ENSG00000086504.18	ENST00000447696.5	722	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	683.544210347802	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAAGGTGAGTGTGTGAG	5	True	NA	NA	False	NA	NA	NA	370502	368334	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_368415_368500_368636_369067_369221_369930_370226_370443
H1_mix_00031870	chr16	-	3684	13	FSM	ENSG00000129925.11	ENST00000431232.7	3672	13	0	-12	0	12	multi-exon	FALSE	canonical	3	541	junction_8	53.0688755821673	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTCTGTGCTCCTTCCC	-13	True	NA	-5	True	ACTAAA	-13	NA	381978	370775	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_372284_372610_372728_374004_374152_374220_374400_374755_374893_375132_375257_375344_375436_376135_376456_376543_376813_377036_377165_377377_377586_377670_377849_381700
H1_mix_00031871	chr16	-	858	5	FSM	ENSG00000129925.11	ENST00000448854.1	858	5	0	0	0	0	multi-exon	FALSE	canonical	3	646	junction_2	27.0127284812179	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCGAAGCAGCCCACCCTT	6750	False	NA	NA	False	NA	NA	NA	375215	372415	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_372728_374004_374152_374220_374400_374755_374893_375132
H1_mix_00031872	chr16	-	2332	1	FSM	ENSG00000277142.1	ENST00000622160.1	2253	1	30	-109	30	109	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGTGACTGAGTCCGTC	1972	False	NA	NA	False	NA	NA	NA	527377	525045	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_525000_527400
H1_mix_00031873	chr16	-	741	5	FSM	ENSG00000130731.16	ENST00000397666.6	726	5	0	-15	0	12	multi-exon	FALSE	canonical	3	129	junction_2	366.778117531567	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACCTCCTCCTAGGAGCA	32	True	NA	-3	True	AATAAA	-33	NA	636302	634414	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_634645_634718_634798_635280_635341_635611_635775_636093
H1_mix_00031874	chr16	-	812	6	FSM	ENSG00000130731.16	ENST00000301686.13	797	6	0	-15	0	12	multi-exon	FALSE	canonical	3	627	junction_4	221.560826862512	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACCTCCTCCTAGGAGCA	29	True	NA	-3	True	AATAAA	-33	NA	636305	634414	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_634645_634718_634798_634888_634957_635280_635341_635611_635775_636093
H1_mix_00031875	chr16	-	558	3	FSM	ENSG00000130731.16	ENST00000338401.8	544	3	0	-14	0	12	multi-exon	FALSE	canonical	3	95	junction_2	535.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACCTCCTCCTAGGAGCA	-8	True	NA	-3	True	AATAAA	-33	NA	636342	634414	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_634645_634718_634798_636093
H1_mix_00031876	chr16	-	813	5	FSM	ENSG00000130731.16	ENST00000614890.4	801	5	0	-12	0	12	multi-exon	FALSE	canonical	3	84	junction_3	421.431118333708	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACCTCCTCCTAGGAGCA	-32	True	NA	-3	True	AATAAA	-33	NA	636366	634414	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_634645_634718_634798_634888_634957_635611_635775_636093
H1_mix_00031877	chr16	-	1724	3	FSM	ENSG00000130731.16	ENST00000448973.6	1710	3	0	-14	0	5	multi-exon	FALSE	canonical	3	1034	junction_2	66	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGCCCCACCTCCTCCT	24	True	NA	-10	True	AATAAA	-26	NA	636310	634421	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_634645_634718_634798_634888
H1_mix_00031878	chr16	-	620	4	FSM	ENSG00000130731.16	ENST00000397664.8	604	4	0	-16	0	5	multi-exon	FALSE	canonical	3	129	junction_2	448.718421977772	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGCCCCACCTCCTCCT	-17	True	NA	-10	True	AATAAA	-26	NA	636351	634421	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_634645_634718_634798_635280_635341_636093
H1_mix_00031879	chr16	-	766	6	FSM	ENSG00000130731.16	ENST00000456420.6	755	6	0	-11	0	0	multi-exon	FALSE	canonical	3	159	junction_3	354.823110859482	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCAGTCTGTGCTCTCAG	95	False	NA	-90	True	NA	NA	NA	636239	634501	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_634645_634718_634798_634888_635064_635280_635341_635611_635775_636093
H1_mix_00031881	chr16	-	588	5	FSM	ENSG00000130731.16	ENST00000568077.5	588	5	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_4	320.420036826663	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCAGTCTGTGCTCTCAG	3	True	NA	-90	True	NA	NA	NA	636331	634501	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_634645_634718_634798_634888_634957_635280_635341_636093
H1_mix_00031882	chr16	-	518	5	FSM	ENSG00000130731.16	ENST00000564039.1	518	5	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_3	434.121742717409	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATGCCTGATCTTCCGG	56	False	NA	NA	False	NA	NA	NA	636278	634625	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_634645_634718_634798_634888_635064_635280_635341_636093
H1_mix_00031884	chr16	-	382	2	FSM	ENSG00000228201.1	ENST00000455294.1	389	2	0	7	0	-7	multi-exon	FALSE	canonical	2	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGACAGTTTCTCCACT	50	False	NA	NA	False	NA	NA	NA	649200	648479	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_648616_648954
H1_mix_00031885	chr16	-	1937	9	FSM	ENSG00000161999.13	ENST00000609261.6	1934	9	0	-3	0	3	multi-exon	FALSE	canonical	3	452	junction_8	50.3140139523771	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCGGGAGTCGGTGATT	6	True	NA	-9	True	AGTAAA	-17	NA	684334	681666	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_682875_682952_683088_683166_683235_683321_683442_683529_683599_683684_683782_683860_683910_684065_684156_684233
H1_mix_00031886	chr16	-	2206	8	FSM	ENSG00000161999.13	ENST00000567120.5	2205	8	0	-1	0	0	multi-exon	FALSE	canonical	3	479	junction_7	46.9398225260334	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTGTCGGGAGTCGGTG	9604	False	NA	-12	True	AGTAAA	-14	NA	684528	681669	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_682875_682952_683088_683166_683235_683321_683442_683529_683599_683684_683782_683860_683910_684065
H1_mix_00031887	chr16	-	1975	6	FSM	ENSG00000161999.13	ENST00000565302.5	1975	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	212.027356725494	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTTGCCAGTAAAGCCTT	4	True	NA	-40	True	NA	NA	NA	684336	681697	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_683088_683166_683235_683321_683442_683529_683599_683684_683910_684233
H1_mix_00031888	chr16	-	1082	7	FSM	ENSG00000161999.13	ENST00000563088.5	1067	7	0	-15	0	0	multi-exon	FALSE	canonical	3	62	junction_6	183.832124504941	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCCTGGACCAGGACGC	9977	False	NA	NA	False	CATAAA	-33	NA	684155	682527	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_682875_682952_683088_683166_683235_683321_683442_683529_683599_683684_683782_683909
H1_mix_00031889	chr16	-	870	7	FSM	ENSG00000161999.13	ENST00000570037.5	870	7	0	0	0	0	multi-exon	FALSE	canonical	3	479	junction_6	49.1426495012225	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGATCACGGCCCAGCAAAA	9968	False	NA	NA	False	NA	NA	NA	684101	682657	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_682875_682952_683088_683166_683235_683321_683442_683529_683599_683684_683910_684065
H1_mix_00031890	chr16	-	823	8	FSM	ENSG00000161999.13	ENST00000562111.1	823	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	176.229905498008	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGATCACGGCCCAGCAAAA	-6	True	NA	NA	False	NA	NA	NA	684346	682657	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_682875_683166_683235_683321_683442_683529_683599_683684_683782_683860_683910_684065_684156_684233
H1_mix_00031892	chr16	-	784	6	ISM	ENSG00000161999.13	ENST00000562824.5	1015	8	208	425	0	-181	internal_fragment	FALSE	canonical	3	497	junction_1	48.4206567489537	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGGCTGGCAGGAGAG	9977	False	NA	NA	False	NA	NA	NA	684155	682952	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_683088_683166_683235_683321_683442_683529_683599_683684_683782_683860
H1_mix_00031893	chr16	-	3251	9	FSM	ENSG00000127580.17	ENST00000293883.9	3243	9	0	-8	0	8	multi-exon	FALSE	canonical	3	166	junction_8	23.2002155162404	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGTGTCACCCCATAGCG	-13	True	NA	0	True	AATAAA	-23	NA	690398	684613	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_684903_684991_685177_685256_685598_685678_685784_685868_685991_686067_686187_686743_687417_687561_687740_689159
H1_mix_00031894	chr16	-	3331	8	NIC	ENSG00000127580.17	novel	3243	9	NA	NA	1	0	intron_retention	FALSE	canonical	3	166	junction_7	21.5235988190277	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCGGCACTGCGTGTCACC	-12	True	NA	-8	True	AATAAA	-15	NA	690397	684621	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_685177_685256_685598_685678_685784_685868_685991_686067_686187_686743_687417_687561_687740_689159
H1_mix_00031895	chr16	-	2186	4	NIC	ENSG00000127585.12	novel	2257	4	NA	NA	-63	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_3	17.5689119374726	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGAGTTGTTTTTAGGT	1923	False	NA	2	True	ATTAAA	-18	NA	695326	692497	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_694424_694633_694698_694991_695077_695215
H1_mix_00031896	chr16	-	2325	3	FSM	ENSG00000127585.12	ENST00000562648.2	2531	3	206	0	-63	0	multi-exon	FALSE	canonical	3	56	junction_1	11.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGAGTTGTTTTTAGGT	1923	False	NA	2	True	ATTAAA	-18	NA	695326	692497	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_694424_694633_694698_694991
H1_mix_00031897	chr16	-	3560	6	FSM	ENSG00000127585.12	ENST00000397621.6	3519	6	-39	-2	-32	0	multi-exon	FALSE	canonical	2	8	junction_5	27.8610839702981	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGAGTTGTTTTTAGGT	-1	True	NA	2	True	ATTAAA	-18	NA	705840	692497	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_694424_694633_694698_694991_695077_695414_695924_696772_697420_705511
H1_mix_00031898	chr16	-	2954	2	FSM	ENSG00000103245.14	ENST00000563051.1	2943	2	0	-11	0	0	multi-exon	FALSE	canonical	3	152	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGAAAACAGCTCCTCTCCT	8098	False	NA	-9	True	AATAAA	-24	NA	732900	729759	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_730656_730842
H1_mix_00031899	chr16	-	2824	3	FSM	ENSG00000103245.14	ENST00000566650.5	2818	3	0	-6	0	0	multi-exon	FALSE	canonical	3	100	junction_2	26	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGAAAACAGCTCCTCTCCT	7664	False	NA	-9	True	AATAAA	-24	NA	733334	729759	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_730656_730842_731001_731564
H1_mix_00031900	chr16	-	2107	11	FSM	ENSG00000103245.14	ENST00000251588.7	2095	11	0	-12	0	7	multi-exon	FALSE	canonical	3	94	junction_5	17.7471124411832	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCCTCTCCTGGCACAT	1	True	NA	-2	True	AATAAA	-31	NA	740997	729752	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_730656_730842_731001_731564_731703_732300_732374_733297_733428_734228_734348_734736_734872_736265_736399_737185_737330_739642_739739_740919
H1_mix_00031904	chr16	-	2055	7	NNC	ENSG00000007376.8	novel	2048	6	NA	NA	0	26104	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	97.097459630346	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCGGGCGCAGTGACTCAC	-8	True	NA	NA	False	NA	NA	NA	788371	758869	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_758895_784981_786378_786826_786929_787076_787180_787353_787478_787555_787745_788255
H1_mix_00031905	chr16	-	2162	5	FSM	ENSG00000007376.8	ENST00000561734.5	2159	5	11	-14	11	14	multi-exon	FALSE	canonical	3	229	junction_2	25.7827461687075	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGAAGTGGGGCTTCCAAG	9129	False	NA	6	True	AATAAA	-38	NA	787970	784959	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_786378_786826_786929_787076_787180_787353_787478_787555
H1_mix_00031906	chr16	-	2062	6	FSM	ENSG00000007376.8	ENST00000007264.7	2048	6	0	-14	0	14	multi-exon	FALSE	canonical	3	201	junction_5	32.8536147174097	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGAAGTGGGGCTTCCAAG	-18	True	NA	6	True	AATAAA	-38	NA	788381	784959	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_786378_786826_786929_787076_787180_787353_787478_787555_787745_788255
H1_mix_00031907	chr16	-	1858	5	FSM	ENSG00000007376.8	ENST00000567114.5	1835	5	0	-23	0	0	multi-exon	FALSE	canonical	3	37	junction_4	95.5039266208463	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACTGGCTCCAAGGATGA	8702	False	NA	-25	True	AATAAA	-7	NA	788397	784990	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_786378_786826_786929_787076_787180_787353_787478_788255
H1_mix_00031912	chr16	-	2606	11	FSM	ENSG00000103227.19	ENST00000262301.16	2606	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	15.3231850475024	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACTGTTTAAATGAAGAA	-12	True	NA	-3	True	NA	NA	NA	970984	853633	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_854707_868943_869057_869882_870067_870728_870883_871160_871342_879569_879738_893006_893073_910930_911080_934243_934255_954356_954667_970787
H1_mix_00031913	chr16	-	763	1	FSM	ENSG00000276931.1	ENST00000620075.1	638	1	-44	-81	-44	81	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGATGTACAGATCAGGA	1916	False	NA	NA	False	NA	NA	NA	969056	968293	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_968300_969100
H1_mix_00031914	chr16	-	3222	2	FSM	ENSG00000260807.7	ENST00000562570.1	3222	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGTCTCCCAAGTATT	657	False	NA	0	True	AATGAA	-22	NA	980913	975760	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_977094_979024
H1_mix_00031916	chr16	-	1210	6	FSM	ENSG00000007520.4	ENST00000007390.3	1210	6	0	0	0	0	multi-exon	FALSE	canonical	3	584	junction_5	78.0138449251157	223	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTTGTGAGTCTGTTTT	-32	True	NA	-6	True	AATGAA	-16	NA	1351878	1349239	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1349609_1349888_1349953_1350057_1350235_1350806_1351001_1351378_1351599_1351692
H1_mix_00031917	chr16	-	5250	15	FSM	ENSG00000059145.19	ENST00000389221.9	5250	15	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	25.6928482068375	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTCTGCTTCTCTGAG	3	True	NA	-17	True	ATTAAA	-14	NA	1414704	1363204	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1366396_1367091_1367350_1367655_1367859_1370129_1370358_1371518_1371612_1385207_1385386_1390631_1390695_1392890_1392977_1394130_1394216_1397177_1397296_1399373_1399510_1401567_1401702_1403167_1403345_1413845_1414056_1414614
H1_mix_00031918	chr16	-	1392	7	NIC	ENSG00000059145.19	novel	4320	6	NA	NA	12	14	combination_of_known_junctions	TRUE	canonical	3	31	junction_1	20.3442593595562	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAGCTCAGTATCTAGAA	19	False	NA	NA	False	NA	NA	NA	1379668	1364159	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_1364256_1366017_1366396_1367091_1367350_1367655_1367859_1370129_1370358_1371518_1371612_1379532
H1_mix_00031919	chr16	-	3971	6	FSM	ENSG00000059145.19	ENST00000674376.1	2184	6	3	-1790	0	0	multi-exon	FALSE	canonical	3	24	junction_1	24.2123935206745	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTCTGCTTCTCTGAG	7	True	NA	-17	True	ATTAAA	-14	NA	1379680	1363204	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1366396_1367241_1367350_1367655_1367859_1370129_1370358_1371518_1371612_1379532
H1_mix_00031923	chr16	-	1024	2	NNC	ENSG00000174109.5	novel	917	2	NA	NA	0	50697	intron_retention	FALSE	non_canonical	0	0	junction_1	0	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATACTTTGGGCCAACATA	-10	True	NA	NA	False	NA	NA	NA	1420747	1369054	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_1369084_1419752
H1_mix_00031924	chr16	-	945	3	NNC	ENSG00000174109.5	novel	917	2	NA	NA	0	50697	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	80	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATACTTTGGGCCAACATA	-10	True	NA	NA	False	NA	NA	NA	1420747	1369054	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_1369084_1419752_1420613_1420691
H1_mix_00031925	chr16	-	917	2	FSM	ENSG00000174109.5	ENST00000442039.3	917	2	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGATGATTCCCTTTTTTT	-10	True	NA	-7	True	AATAAA	-22	NA	1420747	1419751	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1420613_1420691
H1_mix_00031926	chr16	-	1061	1	FSM	ENSG00000174109.5	ENST00000563974.1	1005	1	-57	1	-57	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGATGATTCCCTTTTTT	NA	False	NA	-8	True	AATAAA	-21	NA	1420813	1419752	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1419800_1420800
H1_mix_00031927	chr16	-	4185	9	FSM	ENSG00000103249.18	ENST00000563642.6	4184	9	0	-1	0	1	multi-exon	FALSE	canonical	2	229	junction_2	35.4295074761137	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTGCTTCTTGCCTTTTA	NA	False	NA	0	True	AATAAA	-21	NA	1451969	1444932	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1446718_1447005_1447087_1447391_1447569_1447654_1447715_1448354_1448485_1448680_1448767_1448965_1449094_1449275_1450667_1451622
H1_mix_00031928	chr16	-	4170	25	FSM	ENSG00000103249.18	ENST00000382745.9	4168	25	0	-2	0	1	multi-exon	FALSE	canonical	2	229	junction_2	25.0998007960223	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTGCTTCTTGCCTTTTA	14	True	NA	0	True	AATAAA	-21	NA	1475028	1444932	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1446718_1447005_1447087_1447391_1447569_1447654_1447715_1448354_1448485_1448680_1448767_1448965_1449094_1449275_1449328_1450496_1450667_1451622_1451717_1452754_1452894_1453833_1453895_1454410_1454466_1455133_1455251_1455730_1455796_1456112_1456207_1457253_1457338_1457693_1457757_1459106_1459188_1460417_1460528_1460815_1460949_1461404_1461471_1461602_1461675_1465266_1465339_1474833
H1_mix_00031929	chr16	-	4132	24	FSM	ENSG00000103249.18	ENST00000448525.5	4151	24	20	-1	-7	0	multi-exon	FALSE	canonical	2	11	junction_23	65.6954363648514	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCGCTGCTTCTTGCCTTT	-22	True	NA	-2	True	AATAAA	-19	NA	1475064	1444934	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1446718_1447005_1447087_1447391_1447569_1447654_1447715_1448354_1448485_1448680_1448767_1448965_1449094_1449275_1449328_1450496_1450667_1451622_1451717_1452754_1452894_1453833_1453895_1454410_1454466_1455133_1455251_1455730_1455796_1456112_1456207_1457253_1457338_1457693_1457757_1459106_1459188_1460417_1460528_1460815_1460949_1461404_1461471_1461602_1461675_1474833
H1_mix_00031930	chr16	-	647	5	FSM	ENSG00000103249.18	ENST00000567836.2	647	5	0	0	0	0	multi-exon	FALSE	canonical	2	229	junction_2	45.0964244702393	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGACGTGAGGCCCAGC	NA	False	NA	NA	False	NA	NA	NA	1448608	1446642	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1446718_1447005_1447087_1447391_1447569_1447654_1447715_1448354
H1_mix_00031931	chr16	-	577	3	FSM	ENSG00000103249.18	ENST00000567789.1	577	3	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_2	7.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACACGGCAAGGTTTGCAG	NA	False	NA	NA	False	NA	NA	NA	1449263	1448291	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1448485_1448680_1448767_1448965
H1_mix_00031936	chr16	-	5221	31	FSM	ENSG00000187535.14	ENST00000426508.7	5232	31	11	0	11	0	multi-exon	FALSE	canonical	3	16	junction_30	33.4385838349786	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGTGCCCTGTCCCATCC	-27	True	NA	-3	True	AATAAA	-19	NA	1612061	1510426	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1511151_1518215_1518358_1519880_1520048_1520130_1520344_1520601_1520809_1523517_1523701_1523827_1523957_1524551_1524696_1524783_1524917_1525230_1525327_1525886_1526078_1526618_1526797_1557934_1558135_1561984_1562117_1563996_1564163_1566160_1566292_1568216_1568335_1571406_1571535_1580758_1580851_1583313_1583387_1584216_1584421_1586129_1586276_1587197_1587305_1587932_1588025_1589604_1589781_1592175_1592319_1592466_1592589_1602369_1602592_1607119_1607298_1610663_1610854_1611967
H1_mix_00031937	chr16	-	516	4	FSM	ENSG00000187535.14	ENST00000566818.1	722	4	228	-22	228	22	multi-exon	FALSE	canonical	3	20	junction_3	51.4867836331703	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACGAGGCAGACACAAGGC	NA	False	NA	NA	False	NA	NA	NA	1526796	1524751	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1524917_1525230_1525327_1525886_1526078_1526732
H1_mix_00031938	chr16	-	1092	1	FSM	ENSG00000280231.1	ENST00000624488.1	476	1	90	-706	90	706	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCACAGTGGTTTACGCCT	NA	False	NA	-4	True	ATTAAA	-17	NA	1554040	1552948	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1552900_1554000
H1_mix_00031939	chr16	-	2580	19	FSM	ENSG00000187535.14	ENST00000439987.6	2580	19	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	39.4247603467042	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACCTTTTTAGTTCTTA	17	True	NA	NA	False	NA	NA	NA	1610693	1553920	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1554041_1557934_1558135_1561984_1562117_1563996_1564163_1566160_1566292_1568216_1568335_1571406_1571535_1580758_1580851_1583313_1583387_1584216_1584421_1586129_1586276_1587197_1587305_1587932_1588025_1589604_1589781_1592175_1592319_1592466_1592589_1602369_1602592_1607119_1607298_1610663
H1_mix_00031940	chr16	-	825	3	FSM	ENSG00000187535.14	ENST00000561954.1	826	3	0	1	0	-1	multi-exon	FALSE	canonical	3	143	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTGTCTGCAAGCACCT	NA	False	NA	NA	False	ATTAAA	-27	NA	1564110	1557555	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1558135_1561984_1562117_1563996
H1_mix_00031941	chr16	-	811	5	FSM	ENSG00000103024.8	ENST00000564628.1	811	5	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_3	167.765461284497	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTACGACGTTAAGACATTT	1975	False	NA	-6	True	AATAAA	-40	NA	1771495	1770319	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1770767_1770880_1770994_1771069_1771172_1771268_1771411_1771488
H1_mix_00031942	chr16	-	848	5	FSM	ENSG00000103024.8	ENST00000219302.8	848	5	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_4	28.4868390664882	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTACGACGTTAAGACATTT	-13	True	NA	-6	True	AATAAA	-40	NA	1771543	1770319	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1770767_1770880_1770994_1771069_1771172_1771279_1771411_1771488
H1_mix_00031943	chr16	-	1029	3	FSM	ENSG00000103024.8	ENST00000561637.5	1014	3	0	-15	0	0	multi-exon	FALSE	canonical	3	437	junction_1	13.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTACGACGTTAAGACATTT	-8	True	NA	-6	True	AATAAA	-40	NA	1771538	1770319	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1770767_1770880_1770994_1771069
H1_mix_00031944	chr16	-	773	2	FSM	ENSG00000103024.8	ENST00000567271.1	752	2	0	-21	0	0	multi-exon	FALSE	canonical	3	437	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTACGACGTTAAGACATTT	2264	False	NA	-6	True	AATAAA	-40	NA	1771206	1770319	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1770767_1770880
H1_mix_00031945	chr16	-	929	4	FSM	ENSG00000103024.8	ENST00000563498.1	920	4	0	-9	0	0	multi-exon	FALSE	canonical	3	417	junction_3	19.258475767539	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCAGGAACAGGCAGCTAC	1909	False	1771572	-21	True	AATAAA	-25	NA	1771561	1770334	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1770767_1770880_1770994_1771069_1771172_1771279
H1_mix_00031946	chr16	-	913	4	FSM	ENSG00000103024.8	ENST00000566600.1	913	4	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_3	32.3419232575925	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTTTTTTTATAATAAAGT	1913	False	1771572	-63	True	NA	NA	NA	1771557	1770376	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1770767_1770880_1770994_1771069_1771411_1771488
H1_mix_00031947	chr16	-	931	2	FSM	ENSG00000103024.8	ENST00000565379.1	911	2	0	-20	0	0	multi-exon	FALSE	canonical	3	60	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGAGGAGCTGCTCCAGGA	17	True	NA	-147	True	NA	NA	NA	1771513	1770460	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1770767_1770888
H1_mix_00031948	chr16	-	891	3	FSM	ENSG00000103024.8	ENST00000563367.1	891	3	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_2	25.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGAGGAGCTGCTCCAGGA	-13	True	NA	-147	True	NA	NA	NA	1771543	1770460	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1770767_1770880_1771411_1771488
H1_mix_00031949	chr16	-	1107	3	FSM	ENSG00000074071.15	ENST00000177742.7	1040	3	0	-67	0	67	multi-exon	FALSE	canonical	3	239	junction_1	1202	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCCGGGGGGGCGCGGGG	-12	True	NA	63	True	NA	NA	NA	1773150	1771822	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1772535_1772603_1772647_1772798
H1_mix_00031950	chr16	-	1001	3	FSM	ENSG00000074071.15	ENST00000397375.7	998	3	0	-3	0	-2	multi-exon	FALSE	canonical	3	2643	junction_2	40	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGTCGTGGTGTCTTTGCG	4	True	NA	-6	True	AATAAA	-17	NA	1773134	1771891	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1772514_1772603_1772647_1772798
H1_mix_00031951	chr16	-	1634	6	FSM	ENSG00000162032.16	ENST00000567868.5	1628	6	0	-6	0	0	multi-exon	FALSE	canonical	3	234	junction_5	80.3328077437855	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGCGTGAGCTGAAACGT	-4	True	NA	-2	True	AATAAA	-25	NA	1782557	1776711	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1777444_1777746_1777873_1777945_1778049_1778133_1778613_1781357_1781496_1782501
H1_mix_00031952	chr16	-	1535	7	FSM	ENSG00000162032.16	ENST00000566339.6	1535	7	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_6	78.0628308195107	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGCGTGAGCTGAAACGT	-18	True	NA	-2	True	AATAAA	-25	NA	1782571	1776711	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1777444_1777746_1777873_1777945_1778049_1778133_1778322_1778434_1778613_1781357_1781496_1782501
H1_mix_00031953	chr16	-	1756	5	FSM	ENSG00000162032.16	ENST00000563741.5	1746	5	0	-10	0	0	multi-exon	FALSE	canonical	3	234	junction_4	88.0379889593123	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGCGTGAGCTGAAACGT	NA	False	NA	-2	True	AATAAA	-25	NA	1782594	1776711	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1777444_1777746_1777873_1777945_1778613_1781357_1781496_1782501
H1_mix_00031955	chr16	-	2619	9	FSM	ENSG00000063854.13	ENST00000397356.8	2619	9	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_8	28.3978432279636	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTGCTCATTTGTCAAC	-8	True	NA	NA	False	NA	NA	NA	1826825	1807628	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1809383_1809753_1809834_1816892_1816995_1817167_1817272_1819114_1819224_1819896_1820015_1822299_1822365_1822864_1823038_1826711
H1_mix_00031956	chr16	-	1276	8	FSM	ENSG00000063854.13	ENST00000455446.6	1276	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	71.0963703542665	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGAGGTGGCCGCGTCTTC	-17	True	NA	NA	False	NA	NA	NA	1826834	1808871	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1809383_1809753_1809834_1816892_1816995_1817167_1817272_1819896_1820015_1822299_1822365_1822864_1823038_1826711
H1_mix_00031957	chr16	-	1257	10	FSM	ENSG00000063854.13	ENST00000397353.6	1257	10	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_9	77.9387223685662	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCCTTGCAGACTGTTT	-24	True	NA	-5	True	NA	NA	NA	1826841	1809102	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1809383_1809753_1809834_1816892_1816995_1817167_1817272_1819114_1819224_1819896_1820015_1822299_1822365_1822864_1823038_1826506_1826603_1826711
H1_mix_00031958	chr16	-	1863	14	FSM	ENSG00000162039.17	ENST00000325962.9	1867	14	0	4	0	-2	multi-exon	FALSE	canonical	2	3	junction_2	4.66765275577787	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTACAGATTTGAATGATTT	-20	True	NA	NA	False	AATAAA	-13	NA	1872164	1833989	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1834367_1837783_1837871_1839254_1839439_1841819_1841974_1844861_1844964_1853038_1853135_1853218_1853272_1854099_1854201_1857734_1857931_1860402_1860476_1861984_1862117_1865777_1865836_1868106_1868185_1871992
H1_mix_00031959	chr16	-	1608	4	FSM	ENSG00000198736.13	ENST00000361871.8	1277	4	-182	-149	-182	149	multi-exon	FALSE	canonical	3	302	junction_3	18.1842422626478	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCACCACCATGCTGGAT	9537	False	NA	NA	False	NA	NA	NA	1943381	1938079	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1939144_1940777_1940893_1941256_1941406_1943101
H1_mix_00031960	chr16	-	945	7	FSM	ENSG00000140988.16	ENST00000343262.9	945	7	0	0	0	0	multi-exon	FALSE	canonical	3	17165	junction_4	11939.2473241267	3974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTTTTCCCGTGTCCT	-5	True	NA	-24	True	AATAAA	-18	NA	1964826	1962057	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1962271_1962496_1962657_1962735_1962910_1963148_1963257_1964275_1964366_1964448_1964629_1964806
H1_mix_00031961	chr16	-	926	5	FSM	ENSG00000140988.16	ENST00000526522.5	924	5	0	-2	0	0	multi-exon	FALSE	canonical	3	1378	junction_2	19901.0096022162	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTTTTCCCGTGTCCT	18	False	NA	-24	True	AATAAA	-18	NA	1964803	1962057	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1962271_1962496_1962657_1963148_1963257_1964275_1964366_1964448
H1_mix_00031962	chr16	-	1114	5	FSM	ENSG00000140988.16	ENST00000533872.5	1114	5	0	0	0	0	multi-exon	FALSE	canonical	3	17165	junction_3	13682.2240767903	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGTTTTTTTCCCGTGT	240	False	NA	-27	True	AATAAA	-15	NA	1964581	1962060	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1962271_1962496_1962657_1962735_1963257_1964275_1964366_1964448
H1_mix_00031963	chr16	-	1243	4	FSM	ENSG00000140988.16	ENST00000527871.5	1243	4	0	0	0	0	multi-exon	FALSE	canonical	3	17165	junction_2	14477.7429410342	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGTTTTTTTCCCGTGT	190	False	NA	-27	True	AATAAA	-15	NA	1964631	1962060	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1962271_1962496_1963257_1964275_1964366_1964448
H1_mix_00031964	chr16	-	765	5	FSM	ENSG00000140988.16	ENST00000530225.5	765	5	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	19329.5085620406	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGTTTTTTTCCCGTGT	190	False	NA	-27	True	AATAAA	-15	NA	1964631	1962060	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1962271_1962735_1962910_1963148_1963257_1964275_1964366_1964448
H1_mix_00031965	chr16	-	1106	6	ISM	ENSG00000140988.16	ENST00000343262.9	945	7	14	3	0	0	intron_retention	FALSE	canonical	3	17165	junction_4	12589.7702218905	2471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGTTTTTTTCCCGTGT	9	True	NA	-27	True	AATAAA	-15	NA	1964812	1962060	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_1962271_1962496_1962657_1962735_1962910_1963148_1963257_1964275_1964366_1964448
H1_mix_00031966	chr16	-	1186	5	FSM	ENSG00000140988.16	ENST00000533161.5	1186	5	0	0	0	0	multi-exon	FALSE	canonical	3	17165	junction_3	13344.8443111001	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGTTTTTTTCCCGTGT	8	True	NA	-27	True	AATAAA	-15	NA	1964813	1962060	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1962271_1962496_1962910_1963148_1963257_1964275_1964366_1964448
H1_mix_00031967	chr16	-	993	5	FSM	ENSG00000140988.16	ENST00000529806.5	993	5	0	0	0	0	multi-exon	FALSE	canonical	3	569	junction_4	23830.07893792	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTGAATTAAGCGTGTT	9	True	NA	-45	True	AAGAAA	-3	NA	1964812	1962078	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1962266_1962496_1962657_1962735_1962910_1963148_1963257_1964448
H1_mix_00031970	chr16	-	351	1	FSM	ENSG00000255513.1	ENST00000530779.1	351	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGGAAGAAACGATTGAGA	726	False	NA	NA	False	AAAAAG	-6	NA	1964095	1963744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1963700_1964100
H1_mix_00031971	chr16	-	653	2	FSM	ENSG00000196408.12	ENST00000569739.1	653	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCACCGTCTAAGCGTGC	1824	False	NA	-5	True	AGTAAA	-16	NA	1979644	1978916	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1979350_1979424
H1_mix_00031972	chr16	-	3343	12	FSM	ENSG00000167962.15	ENST00000652647.1	3362	12	20	-1	1	1	multi-exon	FALSE	canonical	3	136	junction_4	23.1216688465157	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGTGTTCTGAGCTTCT	22	False	NA	-15	True	AATAAA	-23	NA	2009794	1997652	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1998586_1998701_1998853_1998964_1999122_1999495_2000257_2000390_2000482_2001003_2001192_2001582_2001701_2002205_2002424_2002520_2002733_2002990_2003121_2003615_2003729_2009523
H1_mix_00031973	chr16	-	3387	11	FSM	ENSG00000167962.15	ENST00000562988.5	3382	11	0	-5	0	5	multi-exon	TRUE	canonical	3	25	junction_6	62.7101267739111	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTTCTGAGCTTCTCTGT	0	True	NA	-11	True	AATAAA	-27	NA	2009764	1997648	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1998586_1998701_1998853_1998964_1999122_1999495_2000257_2000408_2000482_2001003_2001192_2001591_2001701_2002205_2002733_2002990_2003121_2003615_2003729_2009523
H1_mix_00031974	chr16	-	3295	12	NIC	ENSG00000167962.15	novel	3362	12	NA	NA	0	1	intron_retention	FALSE	canonical	3	75	junction_4	38.0273933451676	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGTGTTCTGAGCTTCT	0	True	NA	-15	True	AATAAA	-23	NA	2009764	1997652	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_1998586_1998701_1998853_1998964_1999122_1999495_2000257_2000408_2000482_2001003_2001192_2001582_2001701_2002205_2002424_2002520_2002733_2002990_2003121_2003615_2003729_2009523
H1_mix_00031977	chr16	-	1046	6	FSM	ENSG00000065057.9	ENST00000651570.2	1030	6	-16	0	-3	0	multi-exon	FALSE	canonical	3	601	junction_3	20.1553962997506	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGATCTGGCTGATGTC	-20	True	NA	-7	True	AATAAA	-18	NA	2047850	2039819	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2040048_2040132_2040239_2043566_2043727_2044629_2044801_2046127_2046367_2047708
H1_mix_00031978	chr16	-	911	1	FSM	ENSG00000065057.9	ENST00000623977.1	911	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGTTGTGATCTCAGCT	-17	True	NA	NA	False	NA	NA	NA	2047847	2046936	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2046900_2047800
H1_mix_00031979	chr16	-	1160	3	FSM	ENSG00000008710.20	ENST00000472577.1	1140	3	-20	0	-20	0	multi-exon	FALSE	canonical	3	73	junction_1	6.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCCTTGGGAAGGACAC	NA	False	NA	NA	False	TTTAAA	-40	NA	2090859	2089526	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2090195_2090284_2090591_2090673
H1_mix_00031980	chr16	-	9585	33	ISM	ENSG00000008710.20	ENST00000423118.5	14135	46	23430	1175	362	-358	3prime_fragment	FALSE	canonical	2	10	junction_32	24.1278333828382	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGCGCCCGCCGGATCT	NA	False	NA	NA	False	NA	NA	NA	2112468	2089884	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_2090195_2090284_2090591_2090673_2090809_2090883_2091175_2091422_2091598_2091780_2091907_2092046_2092189_2092479_2092593_2092953_2093094_2093543_2093739_2093810_2094014_2094091_2094211_2097147_2097242_2097318_2097504_2097727_2097778_2097867_2097985_2099643_2099771_2099860_2100072_2100165_2100310_2100395_2100567_2102060_2102257_2102380_2102634_2102813_2102971_2103265_2103896_2104497_2104643_2105321_2105475_2105864_2106025_2106090_2106305_2106397_2106678_2106804_2106949_2107882_2108033_2108251_2111872_2112339
H1_mix_00031982	chr16	-	447	2	FSM	ENSG00000008710.20	ENST00000568796.1	447	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCAGCTCCAATGCCCAC	NA	False	NA	NA	False	NA	NA	NA	2093873	2093354	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2093739_2093810
H1_mix_00031986	chr16	-	339	2	FSM	ENSG00000260260.2	ENST00000563192.2	394	2	47	8	0	1	multi-exon	FALSE	canonical	3	162	junction_1	0	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTTTTCTCTCAAGTGTCT	-4	False	NA	-3	True	AATAAA	-20	NA	2155358	2154799	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2154923_2155142
H1_mix_00031987	chr16	-	5839	20	FSM	ENSG00000167971.16	ENST00000343516.8	5839	20	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	1.85185390376412	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCCTGGCTCACTTTTTG	147	False	2196623	-1	True	AATAAA	-15	NA	2196605	2177179	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2178647_2178901_2179326_2179592_2181600_2181790_2181930_2183645_2183748_2183830_2183942_2184776_2184869_2184950_2185036_2185110_2185200_2185306_2185409_2186706_2186825_2186977_2187073_2187165_2187275_2187352_2187462_2189026_2189158_2189237_2189334_2189418_2189565_2190072_2190171_2190306_2190359_2196338
H1_mix_00031988	chr16	-	550	3	ISM	ENSG00000182685.8	ENST00000328540.8	826	6	718	4	0	-4	intron_retention	FALSE	canonical	3	59	junction_1	2.5	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCATGGTGGTGGTGTTC	4667	False	NA	-22	True	AATAAA	-11	NA	2210145	2209256	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_2209457_2209552_2209707_2209949
H1_mix_00031989	chr16	-	4704	7	Fusion	ENSG00000182685.8_ENSG00000184207.9	novel	826	6	NA	NA	11	-4	intron_retention	FALSE	canonical	3	37	junction_3	556.855157708597	388	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCATGGTGGTGGTGTTC	-17	True	NA	-22	True	AATAAA	-11	NA	2214829	2209256	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr16_-_2209457_2209552_2209707_2209949_2210052_2210125_2210282_2210521_2210651_2210782_2214054_2214137
H1_mix_00031990	chr16	-	783	5	FSM	ENSG00000182685.8	ENST00000562360.5	783	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	9.93415824315276	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCCGACCTGGCCCAGCC	3979	False	NA	NA	False	NA	NA	NA	2210833	2209361	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2209707_2209949_2210052_2210125_2210282_2210521_2210651_2210782
H1_mix_00031991	chr16	-	3164	2	FSM	ENSG00000184207.9	ENST00000333503.8	3164	2	0	0	0	0	multi-exon	FALSE	canonical	3	1544	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAAAATTAGCGGGACTT	-28	True	NA	NA	False	ACTAAA	-3	NA	2214840	2211592	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2214054_2214137
H1_mix_00031993	chr16	-	1499	7	FSM	ENSG00000167969.13	ENST00000301729.9	1507	7	0	8	0	-8	multi-exon	FALSE	canonical	3	842	junction_6	104.413707061009	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCCAAACCCTTGAAACAA	-3	True	NA	NA	False	NA	NA	NA	2251587	2239409	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2240146_2243045_2243225_2243317_2243440_2244405_2244553_2246858_2246987_2251315_2251430_2251514
H1_mix_00031994	chr16	-	948	7	FSM	ENSG00000167969.13	ENST00000562238.5	948	7	0	0	0	0	multi-exon	FALSE	canonical	2	85	junction_2	370.984276396363	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGCCAGCGTTTCATTT	12	True	NA	-30	True	NA	NA	NA	2251572	2239894	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2240146_2243045_2243225_2243368_2243440_2244405_2244553_2246858_2246987_2251315_2251430_2251514
H1_mix_00031995	chr16	-	961	6	FSM	ENSG00000167969.13	ENST00000566379.1	961	6	0	0	0	0	multi-exon	FALSE	canonical	3	1007	junction_5	52.5904934375026	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATCCAGAAGTCCCTGC	-7	True	NA	NA	False	NA	NA	NA	2251591	2240036	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2240146_2243045_2243225_2243317_2243440_2244405_2244553_2246858_2246987_2251315
H1_mix_00031996	chr16	-	2069	8	FSM	ENSG00000205937.12	ENST00000397086.6	2069	8	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_7	1002.93194674211	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGGGTTCACTGCCTTC	998	False	NA	79	True	AATAAA	-24	NA	2267848	2253115	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2254064_2255584_2255727_2262277_2262432_2262739_2262843_2263095_2263288_2264175_2264332_2264572_2264761_2267662
H1_mix_00031997	chr16	-	2037	7	FSM	ENSG00000205937.12	ENST00000566458.5	2037	7	0	0	0	0	multi-exon	FALSE	canonical	3	1168	junction_6	703.416582750854	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTGGGTTCACTGCCTT	-5	True	NA	78	True	AATAAA	-23	NA	2268397	2253116	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2254064_2255584_2255727_2262277_2262432_2262739_2262843_2263095_2263288_2264175_2264332_2268054
H1_mix_00031998	chr16	-	1951	8	FSM	ENSG00000205937.12	ENST00000320225.10	1951	8	0	0	0	0	multi-exon	FALSE	canonical	3	1146	junction_7	744.902486427394	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGTTCTGGGTTCACTGC	2	True	NA	75	True	AATAAA	-20	NA	2268126	2253119	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2254064_2255584_2255727_2262277_2262432_2262739_2262843_2263095_2263288_2264175_2264332_2264572_2264761_2268054
H1_mix_00031999	chr16	-	2225	2	FSM	ENSG00000205937.12	ENST00000562205.1	2223	2	0	-2	0	-1	multi-exon	FALSE	canonical	3	2866	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTAGTTCTGGGTTCACTG	7357	False	NA	74	True	AATAAA	-19	NA	2256866	2253120	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2254064_2255584
H1_mix_00032002	chr16	-	1826	1	FSM	ENSG00000205937.12	ENST00000566783.1	1826	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCAG	1518	False	NA	NA	False	NA	NA	NA	2267328	2265502	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2265500_2267300
H1_mix_00032003	chr16	-	6611	33	FSM	ENSG00000167972.14	ENST00000301732.10	6602	33	0	-9	0	9	multi-exon	FALSE	canonical	3	20	junction_17	5.73767360848454	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGTCACACGCGCGAGC	4	True	NA	4	True	AATAAA	-25	NA	2340728	2275871	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2276806_2277596_2277671_2277878_2278070_2278287_2278459_2278942_2279131_2281026_2281222_2281380_2281510_2283185_2283359_2284278_2284438_2284778_2284999_2285441_2285647_2286693_2286968_2288025_2288330_2289433_2289621_2292139_2292239_2295589_2295741_2297328_2297540_2297765_2297922_2298385_2298541_2299402_2299533_2300004_2300149_2303968_2304151_2308449_2308624_2317282_2317404_2317647_2317765_2319580_2319841_2323522_2323689_2324403_2324532_2326009_2326275_2326412_2326493_2328452_2328758_2329647_2329855_2340572
H1_mix_00032004	chr16	-	476	1	FSM	ENSG00000243445.1	ENST00000468708.1	420	1	43	-99	43	99	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCAATTTGCTGCTGAG	8089	False	NA	NA	False	AAAAAG	-20	NA	2332689	2332213	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2332200_2332700
H1_mix_00032005	chr16	-	1328	1	FSM	ENSG00000259895.1	ENST00000563775.1	3264	1	1701	235	1701	-235	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGGTGAAACCCCATCTT	2052	False	NA	NA	False	NA	NA	NA	2466512	2465184	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2465200_2466500
H1_mix_00032006	chr16	-	3380	2	FSM	ENSG00000205913.7	ENST00000382313.2	3523	2	138	5	138	-5	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACAAAAATTTGTCGAGC	NA	False	NA	NA	False	AGTAAA	-18	NA	2740666	2737095	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2737289_2737479
H1_mix_00032007	chr16	-	631	4	NIC	ENSG00000205913.7	novel	818	6	NA	NA	12	-6	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	0.942809041582063	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACACAAAAATTTGTCGAG	9879	False	NA	NA	False	AGTAAA	-17	NA	2752581	2737096	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_2737289_2737479_2737611_2743551_2743720_2752441
H1_mix_00032008	chr16	-	998	3	FSM	ENSG00000103363.16	ENST00000409477.1	997	3	0	-1	0	0	multi-exon	FALSE	canonical	3	7288	junction_1	636.5	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTGCATTTCTCATTTT	9410	False	NA	-8	True	AATAAA	-16	NA	2777195	2771413	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2772103_2775450_2775557_2776992
H1_mix_00032009	chr16	-	582	5	FSM	ENSG00000103363.16	ENST00000262306.11	582	5	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	3240.46470432869	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTGCATTTCTCATTTT	2	True	NA	-8	True	AATAAA	-16	NA	2777277	2771413	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2771605_2771993_2772103_2775450_2775557_2776992_2777128_2777236
H1_mix_00032010	chr16	-	974	4	FSM	ENSG00000103363.16	ENST00000409906.9	974	4	0	0	0	0	multi-exon	FALSE	canonical	3	4933	junction_3	1502.92078596608	1063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTGCATTTCTCATTTT	-1	True	NA	-8	True	AATAAA	-16	NA	2777280	2771413	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2772103_2775450_2775557_2776992_2777128_2777236
H1_mix_00032011	chr16	-	472	3	FSM	ENSG00000103363.16	ENST00000494946.6	472	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	3630	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTTGCTGCCTCTTTTT	9478	False	NA	-6	True	AATAAA	-18	NA	2777127	2771940	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2772103_2775450_2775626_2776992
H1_mix_00032012	chr16	-	333	3	FSM	ENSG00000103363.16	ENST00000572954.1	331	3	0	-2	0	0	multi-exon	FALSE	canonical	3	389	junction_1	2272	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTTGCTGCCTCTTTTT	7	True	NA	-6	True	AATAAA	-18	NA	2777272	2771940	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2772103_2776992_2777128_2777236
H1_mix_00032013	chr16	-	1165	3	FSM	ENSG00000005001.10	ENST00000575164.1	1157	3	0	-8	0	-4	multi-exon	FALSE	canonical	3	10	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTGTCTGTTTTTTCCC	2666	False	NA	-9	True	AATAAA	-11	NA	2855984	2852733	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2853330_2853864_2854023_2855573
H1_mix_00032014	chr16	-	524	2	FSM	ENSG00000005001.10	ENST00000570950.1	785	2	261	0	261	0	multi-exon	FALSE	canonical	3	8	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGCCTGGCAGCTGGGG	1742	False	NA	NA	False	NA	NA	NA	2856908	2855816	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2856254_2856821
H1_mix_00032017	chr16	-	2061	9	FSM	ENSG00000127564.17	ENST00000440027.6	2061	9	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_2	164.550144332966	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGCCCTTCCTGTCCCTT	1	True	NA	-6	True	AATAAA	-45	NA	2980391	2972790	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2973065_2973137_2973254_2973999_2974158_2974244_2974418_2974549_2974657_2975318_2975813_2976663_2977032_2979647_2979913_2980285
H1_mix_00032018	chr16	-	2078	9	FSM	ENSG00000127564.17	ENST00000262300.13	2061	9	0	-17	0	0	multi-exon	FALSE	canonical	3	418	junction_6	61.8595940416683	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGCCCTTCCTGTCCCTT	1	True	NA	-6	True	AATAAA	-45	NA	2980446	2972790	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2973065_2973137_2973216_2973999_2974158_2974244_2974418_2974549_2974657_2975318_2975813_2976663_2977032_2979647_2979913_2980285
H1_mix_00032019	chr16	-	1806	9	FSM	ENSG00000127564.17	ENST00000574730.5	1806	9	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_7	177.381474511855	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGTGTCTAATAAAAAGTAT	8	True	NA	-64	True	NA	NA	NA	2980439	2972848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2973065_2973137_2973216_2973999_2974158_2974244_2974418_2974549_2974657_2975318_2975813_2976663_2976825_2979647_2979913_2980285
H1_mix_00032020	chr16	-	1893	9	FSM	ENSG00000127564.17	ENST00000573944.5	1891	9	0	-2	0	0	multi-exon	FALSE	canonical	3	52	junction_7	162.72671684453	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGTGTCTAATAAAAAGTAT	-32	True	NA	-64	True	NA	NA	NA	2980479	2972848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2973065_2973137_2973216_2973999_2974158_2974244_2974418_2974549_2974657_2975318_2975813_2976663_2977032_2979807_2979913_2980285
H1_mix_00032022	chr16	-	573	2	FSM	ENSG00000127564.17	ENST00000572658.1	551	2	0	-22	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAGGAAGAGTCTCCACA	-2	True	NA	NA	False	NA	NA	NA	2980394	2979472	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2979937_2980285
H1_mix_00032024	chr16	-	1391	3	NNC	ENSG00000184697.7	novel	1366	2	NA	NA	0	15232	intron_retention	FALSE	non_canonical	0	0	junction_1	2027.5	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAAGAGGGTAGACTCGG	0	True	NA	NA	False	NA	NA	NA	3018183	2999479	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_2999505_3014711_3016043_3018148
H1_mix_00032025	chr16	-	1366	2	FSM	ENSG00000184697.7	ENST00000328796.5	1366	2	0	0	0	0	multi-exon	FALSE	canonical	3	4055	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTTGCAGCGGGTTA	0	True	NA	-30	True	AATAAA	-19	NA	3018183	3014711	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3016043_3018148
H1_mix_00032026	chr16	-	663	4	FSM	ENSG00000103145.11	ENST00000248089.8	656	4	0	-7	0	7	multi-exon	FALSE	canonical	3	343	junction_3	103.82998924524	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGAACCTGGGGCTTTT	26	True	NA	-20	True	AATAAA	-26	NA	3023942	3022617	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3022999_3023232_3023362_3023473_3023531_3023846
H1_mix_00032027	chr16	-	625	3	FSM	ENSG00000103145.11	ENST00000574151.5	618	3	0	-7	0	7	multi-exon	FALSE	canonical	3	163	junction_2	213.5	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGAACCTGGGGCTTTT	7	True	NA	-20	True	AATAAA	-26	NA	3023961	3022617	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3022999_3023232_3023362_3023846
H1_mix_00032028	chr16	-	1365	2	FSM	ENSG00000103145.11	ENST00000575214.1	1365	2	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAAGAAGAACTGAATAAA	10	True	NA	-65	True	NA	NA	NA	3024261	3022662	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3022999_3023232
H1_mix_00032031	chr16	-	4322	7	FSM	ENSG00000162069.16	ENST00000572240.5	3202	7	-1015	-105	13	105	multi-exon	FALSE	canonical	3	48	junction_4	6.92017983067556	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAGGAAAGAGGGGCATG	3950	False	NA	NA	False	NA	NA	NA	3032989	3027576	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3028274_3028347_3028469_3028699_3028831_3029279_3029430_3029544_3030596_3030695_3030813_3030934
H1_mix_00032032	chr16	-	3508	8	FSM	ENSG00000162069.16	ENST00000573514.5	3519	8	13	-2	13	0	multi-exon	FALSE	canonical	3	47	junction_5	7.24498419034627	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCTGGGGGTGTCGTCA	3950	False	NA	92	True	AAAAAG	-28	NA	3032989	3027681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3028274_3028347_3028469_3028699_3028831_3029279_3029430_3029544_3029740_3030448_3030596_3030695_3030813_3030934
H1_mix_00032033	chr16	-	2032	10	FSM	ENSG00000162069.16	ENST00000572449.6	2032	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_9	12.2020034784821	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCTGGGGGTGTCGTCA	-5	True	NA	92	True	AAAAAG	-28	NA	3036944	3027681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3028274_3028347_3028469_3028699_3028831_3029279_3029430_3029544_3029740_3030448_3030596_3030695_3030813_3030934_3031151_3035214_3035527_3036893
H1_mix_00032035	chr16	-	4434	2	FSM	ENSG00000261971.9	ENST00000573130.2	4434	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGGCCAGGAGTGGTGG	3100	False	NA	2	True	AGTAAA	-17	NA	3056232	3051095	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3055033_3055735
H1_mix_00032036	chr16	-	491	3	FSM	ENSG00000261971.9	ENST00000570949.5	491	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	8	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCCAGGACAAGAACAACC	2119	False	NA	NA	False	NA	NA	NA	3057213	3054915	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3055033_3055735_3055946_3057049
H1_mix_00032037	chr16	-	2716	6	FSM	ENSG00000130182.8	ENST00000576985.6	2716	6	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_4	145.53542524073	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCCCTCTTTATTTCTTT	-4	True	NA	-31	True	ATTAAA	-31	NA	3099294	3088889	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3090647_3091539_3091598_3091763_3091829_3092048_3092317_3092541_3093005_3099189
H1_mix_00032038	chr16	-	2247	5	FSM	ENSG00000130182.8	ENST00000575108.5	2247	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	220.854024187924	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGGCCCCTCTTTATTT	-2	True	NA	-35	True	ATTAAA	-27	NA	3099292	3088893	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3090647_3091539_3091598_3091763_3091829_3092048_3092317_3099189
H1_mix_00032039	chr16	-	577	4	FSM	ENSG00000130182.8	ENST00000572431.1	575	4	0	-2	0	0	multi-exon	FALSE	canonical	3	25	junction_3	250.360184978008	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCCGCACGCCTGCCACC	62	False	NA	NA	False	NA	NA	NA	3099228	3090231	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3090647_3091539_3091598_3091763_3091829_3099189
H1_mix_00032040	chr16	-	4485	3	FSM	ENSG00000263072.9	ENST00000654482.1	4485	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	6	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTGTGTGGCTGTTGGTGG	9978	False	NA	NA	False	NA	NA	NA	3133709	3126385	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3129654_3131746_3132104_3132849
H1_mix_00032041	chr16	-	1592	3	FSM	ENSG00000263072.9	ENST00000571963.5	1592	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTAGGGTTCTCCAGAAA	-20	True	NA	NA	False	NA	NA	NA	3134882	3128671	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3129654_3131746_3132104_3134629
H1_mix_00032042	chr16	-	2750	2	FSM	ENSG00000263072.9	ENST00000653148.1	2013	2	-737	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATATATTAAATTTTCC	9983	False	NA	-33	True	NA	NA	NA	3133704	3128861	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3129654_3131746
H1_mix_00032045	chr16	-	634	2	FSM	ENSG00000263072.9	ENST00000575089.2	688	2	53	1	8	-1	multi-exon	FALSE	canonical	3	50	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCGGATTGCACTTTCTT	8860	False	NA	-12	True	CATAAA	-17	NA	3134827	3131667	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3132104_3134629
H1_mix_00032046	chr16	-	754	1	FSM	ENSG00000261889.1	ENST00000570843.1	748	1	96	-102	96	102	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGTATGTATAAAATTTG	1356	False	NA	NA	False	AATAAA	-3	NA	3157387	3156633	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3156600_3157400
H1_mix_00032047	chr16	-	3368	5	FSM	ENSG00000010539.12	ENST00000431561.7	3348	5	0	-20	0	0	multi-exon	FALSE	canonical	3	20	junction_4	19.3455421221531	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGCCTATTGGTCTTTT	0	True	NA	-16	True	NA	NA	NA	3235167	3222324	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3224614_3232420_3232548_3232832_3232922_3233505_3233837_3234635
H1_mix_00032048	chr16	-	3162	5	FSM	ENSG00000010539.12	ENST00000396871.8	3162	5	17	-17	17	0	multi-exon	FALSE	canonical	2	3	junction_4	25.5868618630734	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGCCTATTGGTCTTTT	127	False	NA	-16	True	NA	NA	NA	3235440	3222324	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3224611_3232420_3232548_3232832_3232922_3233505_3233837_3235111
H1_mix_00032049	chr16	-	2373	5	FSM	ENSG00000010539.12	ENST00000396870.8	2373	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	20.7484939212464	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCAGACTCTCATTTGT	-19	True	NA	-103	True	AATATA	-13	NA	3235186	3223335	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3224611_3232420_3232548_3232832_3232922_3233505_3233837_3234635
H1_mix_00032052	chr16	-	1939	2	NIC	ENSG00000140993.11	novel	3421	2	NA	NA	75	-25	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACATTTGTGTTTCTTTAA	76	False	NA	-24	True	TATAAA	-19	NA	3305355	3298832	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_3300628_3305211
H1_mix_00032055	chr16	-	3109	7	FSM	ENSG00000140987.21	ENST00000396852.9	3108	7	0	-1	0	1	multi-exon	FALSE	canonical	3	33	junction_3	10.3225750448013	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGGCCTTTGGTTGTA	-13	True	NA	-3	True	AATAAA	-18	NA	3401004	3382083	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3383712_3384458_3384942_3390009_3390134_3390422_3390518_3393648_3393815_3397191_3397745_3400944
H1_mix_00032057	chr16	-	5484	4	FSM	ENSG00000167981.7	ENST00000301744.7	5483	4	8	-9	8	9	multi-exon	FALSE	canonical	3	21	junction_2	2.35702260395516	186	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTTTAAAAAAAATACGTG	-18	True	NA	NA	False	ATTAAA	-32	NA	3443496	3432404	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3437539_3440806_3440934_3443120_3443207_3443359
H1_mix_00032059	chr16	-	3228	7	FSM	ENSG00000188827.11	ENST00000466154.5	3228	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_6	3.33749739908346	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGGTAAGAACTGGCTC	2338	False	NA	NA	False	NA	NA	NA	3609259	3595610	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3595694_3596152_3596394_3597378_3597696_3597796_3598000_3600978_3602308_3606473_3606699_3608429
H1_mix_00032060	chr16	-	3069	4	FSM	ENSG00000188827.11	ENST00000486524.1	3075	4	0	6	0	-6	multi-exon	FALSE	canonical	2	8	junction_3	2.94392028877595	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTCTCCAAAAAAAAAAAAAA	12	True	NA	NA	False	NA	NA	NA	3611585	3600626	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3602308_3606473_3606699_3608429_3609567_3611559
H1_mix_00032061	chr16	-	2224	18	FSM	ENSG00000126602.11	ENST00000246957.10	2223	18	0	-1	0	1	multi-exon	FALSE	canonical	3	1360	junction_11	133.174703792063	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTGGGCTTTTTTTC	3	True	NA	-4	True	TTTAAA	-19	NA	3717524	3658035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3658231_3658792_3658866_3661986_3662133_3662881_3662968_3663423_3663563_3664273_3664460_3665970_3666119_3671721_3671792_3672699_3672821_3674338_3674495_3675323_3675398_3676035_3676146_3677497_3677659_3679718_3679791_3685995_3686137_3689054_3689138_3690826_3690986_3717420
H1_mix_00032064	chr16	-	9509	30	NIC	ENSG00000005339.15	novel	10790	31	NA	NA	0	-5	combination_of_known_splicesites	FALSE	canonical	1	3	junction_29	20.0798643234588	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGATGGTTCAGATTGG	608	False	NA	-5	True	AATAAA	-22	NA	3880120	3725058	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_3729875_3731191_3731474_3731775_3731938_3736035_3736204_3736649_3736816_3738558_3738673_3739577_3739725_3740398_3740550_3744893_3744962_3745276_3745355_3749626_3749684_3751725_3751837_3757287_3757377_3757808_3758049_3758853_3758973_3767719_3767910_3769173_3769354_3770569_3770987_3773750_3773931_3774568_3774694_3777612_3777658_3778010_3778183_3778699_3778818_3780731_3780879_3781203_3781307_3782683_3782927_3791980_3792095_3793385_3793627_3810602_3810780_3879831
H1_mix_00032065	chr16	-	10798	31	FSM	ENSG00000005339.15	ENST00000262367.10	10790	31	-8	0	-8	0	multi-exon	FALSE	canonical	3	40	junction_9	16.0631047227282	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGTTCAGATTGGCTAAT	7	False	NA	0	True	AATAAA	-27	NA	3880721	3725053	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3729875_3731191_3731474_3731775_3731938_3736035_3736204_3736649_3736816_3738558_3738673_3739577_3739725_3740398_3740550_3744893_3744962_3745276_3745355_3749626_3749684_3751725_3751807_3757287_3757377_3757808_3758049_3758853_3758973_3767719_3767910_3769173_3769354_3770569_3770987_3773750_3773931_3774568_3774694_3777612_3777658_3778010_3778183_3778699_3778818_3780731_3780879_3781203_3781307_3782683_3782927_3791980_3792095_3793385_3793627_3810602_3810780_3850296_3851010_3879831
H1_mix_00032067	chr16	-	3316	23	FSM	ENSG00000005339.15	ENST00000570939.2	3316	23	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_9	18.8544336807417	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGAGAGGAAAAAGGAAGAG	NA	False	NA	84	True	NA	NA	NA	3782861	3736082	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3736204_3736649_3736816_3738558_3738673_3739577_3739725_3740398_3740550_3744893_3744962_3745276_3745355_3749626_3749684_3751725_3751837_3757287_3757377_3757808_3758049_3758853_3758973_3767719_3767910_3769173_3769354_3770569_3770987_3773750_3773931_3774568_3774694_3777612_3777658_3778010_3778183_3778699_3778818_3780731_3780879_3781203_3781307_3782683
H1_mix_00032068	chr16	-	718	7	FSM	ENSG00000005339.15	ENST00000573517.6	718	7	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	12.1792172709634	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAGTAGTTAGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-25	NA	3757291	3739445	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3739725_3740398_3740550_3744893_3744962_3745276_3745355_3749626_3749684_3751725_3751807_3757287
H1_mix_00032073	chr16	-	4667	6	ISM	ENSG00000090447.12	ENST00000204517.11	2163	7	7454	-2	1618	2	3prime_fragment	FALSE	canonical	3	70	junction_1	3.96988664825584	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGAGTCTCCTGGGTGTG	7758	False	NA	-3	True	AATAAA	-22	NA	4265569	4257183	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_4258250_4260089_4260246_4260454_4260596_4261778_4261950_4262323_4262423_4262535
H1_mix_00032074	chr16	-	6072	5	FSM	ENSG00000090447.12	ENST00000575320.1	6491	5	422	-3	422	2	multi-exon	FALSE	canonical	3	70	junction_1	2.29128784747792	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGAGTCTCCTGGGTGTG	6562	False	NA	-3	True	AATAAA	-22	NA	4266765	4257183	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4258250_4260089_4260596_4261778_4261950_4262323_4262423_4262535
H1_mix_00032075	chr16	-	2163	7	FSM	ENSG00000090447.12	ENST00000204517.11	2163	7	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_6	4.29793231940921	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGAGTCTCCTGGGTG	17	True	NA	-5	True	AATAAA	-20	NA	4273023	4257185	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4258250_4260089_4260246_4260454_4260596_4261778_4261950_4262323_4262423_4262535_4262702_4272657
H1_mix_00032076	chr16	-	367	4	FSM	ENSG00000262686.1	ENST00000576080.1	340	4	-13	-14	-13	14	multi-exon	FALSE	canonical	3	5	junction_1	2.86744175568088	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTCGCCAGTGTGCATGAG	NA	False	NA	NA	False	AATAAA	-15	NA	4328353	4324652	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4324776_4325269_4325355_4326429_4326495_4328259
H1_mix_00032077	chr16	-	280	1	FSM	ENSG00000262712.1	ENST00000574705.1	1949	1	1551	118	1551	-118	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGATACATGGCTCTCCA	9700	False	NA	NA	False	NA	NA	NA	4336267	4335987	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4336000_4336300
H1_mix_00032078	chr16	-	725	5	FSM	ENSG00000217930.8	ENST00000573553.5	722	5	0	-3	0	1	multi-exon	FALSE	canonical	3	57	junction_4	302.863005334095	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTTTGCATGTGTCCAGA	7550	False	NA	-6	True	AATAAA	-17	NA	4343761	4340247	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4340406_4340919_4340986_4341367_4341505_4343206_4343292_4343482
H1_mix_00032079	chr16	-	653	5	FSM	ENSG00000217930.8	ENST00000573614.5	650	5	0	-3	0	1	multi-exon	FALSE	canonical	3	87	junction_3	292.769000237389	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTTTGCATGTGTCCAGA	-4	True	NA	-6	True	AATAAA	-17	NA	4351270	4340247	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4340406_4340919_4340986_4341367_4341673_4343206_4343292_4351231
H1_mix_00032080	chr16	-	609	5	FSM	ENSG00000217930.8	ENST00000571986.5	606	5	0	-3	0	1	multi-exon	FALSE	canonical	3	16	junction_3	320.10193688886	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTTTGCATGTGTCCAGA	-4	True	NA	-6	True	AATAAA	-17	NA	4351315	4340247	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4340406_4340919_4340986_4341367_4341584_4343206_4343292_4351231
H1_mix_00032081	chr16	-	536	5	FSM	ENSG00000217930.8	ENST00000318059.8	533	5	0	-3	0	1	multi-exon	FALSE	canonical	3	454	junction_4	142.967435103243	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTTTGCATGTGTCCAGA	-10	True	NA	-6	True	AATAAA	-17	NA	4351321	4340247	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4340406_4340919_4340986_4341367_4341505_4343206_4343292_4351231
H1_mix_00032084	chr16	-	3476	28	FSM	ENSG00000262246.6	ENST00000251166.9	3472	28	0	-4	0	4	multi-exon	FALSE	canonical	3	101	junction_5	14.8448769065415	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGCTGCTGTGGTCTCTG	-12	True	NA	0	True	ATTAAA	-22	NA	4416596	4354537	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4355164_4355285_4355373_4357167_4357260_4357967_4358104_4358366_4358484_4359295_4359386_4359479_4359622_4360277_4360364_4360443_4360549_4360942_4361086_4361161_4361249_4361360_4361470_4361984_4362161_4362611_4362739_4364275_4364414_4364596_4364690_4364774_4364921_4365002_4365061_4365490_4365546_4387985_4388069_4388544_4388632_4395288_4395340_4405490_4405568_4407500_4407685_4408180_4408252_4412355_4412431_4413307_4413405_4416458
H1_mix_00032087	chr16	-	1247	6	FSM	ENSG00000153406.14	ENST00000404295.7	1233	6	0	-14	0	11	multi-exon	FALSE	canonical	3	360	junction_5	58.7142231490803	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGGACTCTGCTTCCAG	-20	True	NA	-7	True	AATAAA	-30	NA	4474622	4461679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4461960_4463659_4463851_4466152_4466403_4469226_4469466_4474092_4474167_4474409
H1_mix_00032088	chr16	-	1106	6	FSM	ENSG00000153406.14	ENST00000283429.11	1092	6	0	-14	0	11	multi-exon	FALSE	canonical	3	102	junction_5	159.787859363595	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGGACTCTGCTTCCAG	-23	True	NA	-7	True	AATAAA	-30	NA	4474625	4461679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4461960_4463659_4463851_4466152_4466403_4469226_4469466_4474092_4474167_4474553
H1_mix_00032089	chr16	-	1255	6	FSM	ENSG00000153406.14	ENST00000574425.5	1240	6	0	-15	0	11	multi-exon	FALSE	canonical	3	65	junction_5	174.487134196192	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGGACTCTGCTTCCAG	-41	True	NA	-7	True	AATAAA	-30	NA	4474643	4461679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4461960_4463659_4463851_4466152_4466403_4469226_4469466_4474092_4474167_4474422
H1_mix_00032090	chr16	-	1719	6	FSM	ENSG00000153406.14	ENST00000574733.5	1719	6	11	-11	2	11	multi-exon	FALSE	canonical	1	1	junction_5	199.947993238242	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGGACTCTGCTTCCAG	NA	False	NA	-7	True	AATAAA	-30	NA	4476295	4461679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4461960_4463659_4463851_4466152_4466403_4469226_4469466_4474092_4474793_4476236
H1_mix_00032094	chr16	-	3009	5	FSM	ENSG00000089486.17	ENST00000399599.7	3009	5	0	0	0	0	multi-exon	FALSE	canonical	3	600	junction_2	32.2674371464484	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAGATTCCTATTAATAAAA	NA	False	NA	-38	True	AATAAA	-14	NA	4515109	4510738	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4512684_4512790_4513065_4513695_4513852_4514045_4514145_4514574
H1_mix_00032095	chr16	-	2777	6	FSM	ENSG00000089486.17	ENST00000563332.6	2774	6	0	-3	0	-3	multi-exon	FALSE	canonical	3	511	junction_5	62.7330853696835	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGTGCTTTTTTAAAA	9	True	NA	29	True	AATGAA	-13	NA	4538470	4510671	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4512684_4512790_4513065_4513695_4513852_4514045_4514145_4514574_4514665_4538324
H1_mix_00032096	chr16	-	2703	6	FSM	ENSG00000089486.17	ENST00000567695.6	2706	6	0	3	0	-3	multi-exon	FALSE	canonical	3	71	junction_5	233.490556554221	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGTGCTTTTTTAAAA	7	True	NA	29	True	AATGAA	-13	NA	4538773	4510671	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4512684_4512790_4513065_4513695_4513852_4514045_4514145_4514574_4514665_4538701
H1_mix_00032099	chr16	-	531	1	FSM	ENSG00000261612.1	ENST00000564581.1	315	1	-87	-129	-87	129	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATACTTTTTTTATATGT	6	True	NA	NA	False	NA	NA	NA	4563215	4562684	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4562700_4563200
H1_mix_00032101	chr16	-	1275	3	FSM	ENSG00000153443.13	ENST00000591897.5	1275	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	159	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGGCTCTGTGGTCTTA	7	True	NA	-5	True	NA	NA	NA	4615027	4608882	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4609984_4610492_4610556_4614916
H1_mix_00032102	chr16	-	1375	3	FSM	ENSG00000153443.13	ENST00000283474.12	1374	3	0	-1	0	0	multi-exon	FALSE	canonical	3	324	junction_2	8.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGGCTCTGTGGTCTTA	-5	True	NA	-5	True	NA	NA	NA	4614888	4608882	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4609984_4610492_4610556_4614677
H1_mix_00032103	chr16	-	707	3	FSM	ENSG00000153443.13	ENST00000587649.1	707	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	160.5	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCCGGCTTCAGACTGGC	10	True	NA	NA	False	NA	NA	NA	4614873	4609720	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4609984_4610492_4610556_4614492
H1_mix_00032106	chr16	-	2823	14	FSM	ENSG00000168096.15	ENST00000590803.5	2821	14	0	-2	0	0	multi-exon	FALSE	canonical	3	11	junction_13	43.6196579103163	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGGCTCAGTTCTGGTC	7082	False	NA	-8	True	AATAAA	-17	NA	4727169	4696509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4696897_4697016_4697105_4697332_4697417_4697976_4698063_4698426_4698600_4698799_4698942_4699051_4699177_4700969_4701135_4701433_4702243_4705094_4705254_4714050_4714187_4724749_4724832_4726658_4726855_4726978
H1_mix_00032110	chr16	-	2304	17	FSM	ENSG00000168096.15	ENST00000592077.5	2302	17	0	-2	0	0	multi-exon	FALSE	canonical	3	21	junction_16	49.8146564777877	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGGCTCAGTTCTGGTC	3748	False	NA	-8	True	AATAAA	-17	NA	4734219	4696509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4696897_4697016_4697105_4697332_4697417_4697976_4698063_4698426_4698600_4698799_4698942_4699051_4699177_4700969_4701135_4701433_4701544_4702101_4702243_4705094_4705254_4714050_4714187_4724749_4724832_4726658_4726781_4729979_4730152_4731511_4731580_4734155
H1_mix_00032111	chr16	-	2539	17	NIC	ENSG00000168096.15	novel	2772	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_14	41.9631069363316	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGGCTCAGTTCTGGTC	2	True	NA	-8	True	AATAAA	-17	NA	4734249	4696509	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_4696897_4697016_4697105_4697332_4697417_4697976_4698063_4698426_4698600_4698799_4698942_4699051_4699177_4700969_4701135_4701433_4701544_4702101_4702243_4705094_4705254_4714050_4714187_4724749_4724832_4726658_4726855_4726978_4727178_4729979_4730152_4734155
H1_mix_00032121	chr16	-	566	5	FSM	ENSG00000168096.15	ENST00000587005.5	566	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	37.9637985454564	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCTGGCCATGAGATAAT	3775	False	NA	NA	False	NA	NA	NA	4734192	4724791	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4724832_4726658_4726777_4726978_4727178_4729979_4730152_4734155
H1_mix_00032125	chr16	-	5824	6	FSM	ENSG00000103199.14	ENST00000219478.11	5824	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	4.22374241638857	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	0	True	NA	NA	False	NA	NA	NA	4767162	4748238	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4753059_4760491_4760589_4762270_4762336_4762572_4762757_4765564_4766077_4767016
H1_mix_00032126	chr16	-	1831	5	FSM	ENSG00000103199.14	ENST00000589422.1	1831	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	11.5406888875838	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGACCCTGTGCGCTGT	1158	False	NA	NA	False	NA	NA	NA	4766004	4751970	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4753059_4760491_4760589_4762270_4762336_4762572_4762714_4765564
H1_mix_00032127	chr16	-	1458	11	FSM	ENSG00000067836.13	ENST00000322048.12	1418	11	-32	-8	0	8	multi-exon	FALSE	canonical	3	392	junction_2	19.8343137012602	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCTGTCTGTCTGAGT	-19	True	NA	2	True	AATAAA	-24	NA	4802665	4796959	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4797502_4797713_4797841_4797937_4797988_4798070_4798185_4798568_4798668_4799685_4799782_4800497_4800579_4801266_4801322_4801502_4801586_4802381_4802454_4802526
H1_mix_00032128	chr16	-	1371	10	FSM	ENSG00000067836.13	ENST00000587843.5	1362	10	0	-9	0	8	multi-exon	FALSE	canonical	3	29	junction_7	126.258993079041	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCTGTCTGTCTGAGT	13	True	NA	2	True	AATAAA	-24	NA	4802633	4796959	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4797502_4797713_4797841_4797937_4797988_4798070_4798185_4798568_4798668_4799685_4799782_4800497_4800579_4801502_4801586_4802381_4802454_4802526
H1_mix_00032132	chr16	-	3606	14	FSM	ENSG00000140632.17	ENST00000589389.5	3606	14	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_8	204.550857378887	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCCGCAGGAGTCCTG	6777	False	NA	-7	True	AATAAA	-19	NA	4846210	4803202	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4805311_4811169_4811295_4811622_4811803_4812085_4812249_4813736_4813839_4814536_4814648_4817597_4817698_4821379_4821454_4822874_4822932_4823820_4823908_4831978_4832222_4832773_4832913_4845073_4845154_4846173
H1_mix_00032133	chr16	-	3527	18	FSM	ENSG00000140632.17	ENST00000588732.5	3527	18	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_14	280.069973955472	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCCGCAGGAGTCCTG	17	True	NA	-7	True	AATAAA	-19	NA	4847271	4803202	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4804149_4804521_4805311_4811169_4811295_4811622_4811803_4812085_4812249_4813736_4813839_4814536_4814648_4817597_4817698_4821379_4821454_4821546_4821598_4822874_4822932_4823820_4823908_4831978_4832222_4832773_4832913_4843403_4843603_4845073_4845154_4846173_4846211_4847227
H1_mix_00032134	chr16	-	3726	16	FSM	ENSG00000140632.17	ENST00000321919.14	3718	16	0	-8	0	8	multi-exon	FALSE	canonical	3	527	junction_6	86.086777923984	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGAGTCCTGCTTCCCTC	0	True	NA	1	True	AATAAA	-27	NA	4847288	4803194	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4805311_4811169_4811295_4811622_4811803_4812085_4812249_4813736_4813839_4814536_4814648_4817597_4817698_4821379_4821454_4821546_4821598_4822874_4822932_4823820_4823908_4831978_4832222_4832773_4832913_4845073_4845154_4846173_4846211_4847227
H1_mix_00032135	chr16	-	3395	17	NIC	ENSG00000140632.17	novel	3527	18	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	3	202	junction_1	162.235349396332	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCCGCAGGAGTCCTG	5649	False	NA	-7	True	AATAAA	-19	NA	4847338	4803202	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_4804149_4804521_4805311_4811169_4811295_4811622_4811803_4812085_4812249_4813736_4813839_4814536_4814648_4817597_4817698_4821379_4821454_4821546_4821598_4822874_4822932_4823820_4823908_4831978_4832222_4832773_4832913_4845073_4845154_4846173_4846211_4847227
H1_mix_00032141	chr16	-	6251	22	FSM	ENSG00000118898.16	ENST00000345988.7	6251	22	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_15	8.05114039611809	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGTTTCTTCTTTTGCA	-7	True	NA	0	True	AATAAA	-30	NA	4937148	4882506	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4886048_4887134_4887228_4888101_4888219_4888977_4889062_4890183_4890335_4890727_4890922_4891810_4891950_4892034_4892214_4893212_4893371_4893540_4893639_4894466_4894619_4895260_4895408_4895593_4895717_4897674_4897771_4899012_4899121_4899222_4899385_4900829_4900872_4900963_4901090_4902405_4902527_4903885_4904041_4910849_4910950_4936983
H1_mix_00032142	chr16	-	237	2	FSM	ENSG00000118898.16	ENST00000589090.1	496	2	0	259	0	-259	multi-exon	FALSE	canonical	3	91	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCCGGGAAACTTCCGC	-8	True	NA	NA	False	NA	NA	NA	4890336	4888977	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4889062_4890183
H1_mix_00032143	chr16	-	652	2	FSM	ENSG00000118898.16	ENST00000590093.1	652	2	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGCATAAAGCACATA	2422	False	NA	NA	False	NA	NA	NA	4892179	4891442	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4891950_4892034
H1_mix_00032145	chr16	-	2200	10	FSM	ENSG00000103174.13	ENST00000312251.8	2203	10	3	0	2	0	multi-exon	FALSE	canonical	3	41	junction_5	5.93379107680831	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGACTTAGGTCACTGC	-1	True	NA	2	True	AATAAA	-45	NA	5033932	5024843	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_5025686_5027134_5027199_5027277_5027380_5027845_5027894_5027979_5028186_5028879_5029009_5030384_5030494_5031744_5031885_5033272_5033729_5033828
H1_mix_00032148	chr16	-	864	5	ISM	ENSG00000153446.16	ENST00000472572.8	1360	8	7278	7	-58	-7	3prime_fragment	FALSE	canonical	3	17	junction_2	4.26468052730799	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTGACCCAGGGTTGAGT	7352	False	NA	-8	True	AATAAA	-10	NA	5058678	5044128	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_5044479_5047877_5047965_5055245_5055351_5056052_5056189_5058492
H1_mix_00032149	chr16	-	1282	8	FSM	ENSG00000118894.15	ENST00000587161.5	1282	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	131.445185285327	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAACGTGTGTATCA	28	False	NA	NA	False	NA	NA	NA	5097766	5085362	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_5085733_5089106_5089257_5090083_5090350_5090431_5090566_5091793_5091896_5095451_5095515_5097279_5097354_5097643
H1_mix_00032153	chr16	-	897	7	FSM	ENSG00000118894.15	ENST00000458008.8	2268	7	46	1325	0	-14	multi-exon	FALSE	canonical	3	110	junction_4	93.5546483196972	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACACACGACTCCAACGGG	52	False	NA	NA	False	NA	NA	NA	5097742	5085628	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_5085733_5089106_5089257_5090083_5090350_5090431_5090566_5093483_5093565_5095451_5095515_5097643
H1_mix_00032154	chr16	-	2397	8	FSM	ENSG00000118894.15	ENST00000427587.9	2397	8	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_4	60.4243497343275	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGATCTGTGGCTACTTTC	-1	True	NA	NA	False	AATAAA	-37	NA	5097795	5084283	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_5085733_5089106_5089257_5090083_5090350_5090431_5090566_5091793_5091896_5093483_5093565_5095451_5095515_5097643
H1_mix_00032155	chr16	-	1340	8	NIC	ENSG00000118894.15	novel	2397	8	NA	NA	0	-61	intron_retention	FALSE	canonical	3	147	junction_7	84.5337754017497	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGAAGAGCACTTGGAGATG	28	False	NA	NA	False	NA	NA	NA	5097766	5085675	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_5085733_5089106_5089257_5090083_5090350_5090431_5090566_5091793_5091896_5093483_5093565_5095451_5095515_5097279
H1_mix_00032158	chr16	-	1184	3	FSM	ENSG00000232258.7	ENST00000624696.1	560	3	-380	-244	-25	-3	multi-exon	FALSE	canonical	0	0	junction_1	4	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACACAGAGCTTTACAGAT	293	False	NA	-3	True	AATAAA	-16	NA	8590218	8569502	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_8570006_8589212_8589294_8589618
H1_mix_00032160	chr16	-	2037	2	NNC	ENSG00000184857.8	novel	1439	2	NA	NA	-93	-273	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAACAGCCTACAGCAGAT	NA	False	NA	-10	True	AATAAA	-26	NA	8797735	8795452	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_8796591_8796836
H1_mix_00032162	chr16	-	2710	4	FSM	ENSG00000153048.11	ENST00000311052.10	2709	4	0	-1	0	1	multi-exon	FALSE	canonical	3	1731	junction_3	494.741908024331	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTATGCGTGTGTTTGTGTG	2	True	NA	-31	True	AATAAA	-18	NA	8869006	8852945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_8855327_8858349_8858473_8859170_8859336_8868965
H1_mix_00032168	chr16	-	5835	31	FSM	ENSG00000187555.16	ENST00000344836.9	5831	31	0	-4	0	4	multi-exon	FALSE	canonical	2	331	junction_30	79.3211755390002	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGTAATGTTTCCGTCA	15	True	NA	1	True	ATTAAA	-21	NA	8963906	8892092	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_8894105_8894549_8894641_8894783_8894856_8895030_8895151_8895641_8895742_8896998_8897100_8898359_8898438_8898530_8898640_8899120_8899189_8899603_8899758_8900529_8900631_8900989_8901058_8901141_8901235_8902081_8902188_8902380_8902483_8903267_8903403_8904434_8904566_8905186_8905332_8906425_8906583_8908340_8908451_8910744_8910828_8915253_8915345_8915444_8915526_8916501_8916557_8917025_8917157_8919030_8919140_8920358_8920448_8921156_8921296_8923214_8923414_8930292_8930398_8963206
H1_mix_00032170	chr16	-	4533	31	FSM	ENSG00000187555.16	ENST00000563961.5	4533	31	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_28	125.716329709213	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGTGAGTTACGTGGAAG	4017	False	NA	-11	True	AATAAA	-21	NA	8963422	8892771	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_8894105_8894549_8894641_8894783_8894856_8895030_8895151_8895641_8895742_8896998_8897100_8898359_8898438_8898530_8898640_8899120_8899189_8899603_8899758_8900529_8900631_8900989_8901058_8901141_8901235_8902081_8902188_8902380_8902483_8903267_8903403_8904434_8904566_8905186_8905332_8906425_8906583_8908340_8908451_8910744_8910828_8915253_8915345_8915444_8915526_8916501_8916557_8917025_8917157_8919030_8919140_8920358_8920448_8921156_8921296_8923353_8923414_8930292_8930398_8963206
H1_mix_00032171	chr16	-	453	4	FSM	ENSG00000187555.16	ENST00000565883.1	453	4	0	0	0	0	multi-exon	FALSE	canonical	2	425	junction_2	82.7620417555993	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGAGGTCTTCGGAACG	NA	False	NA	NA	False	NA	NA	NA	8898544	8895083	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_8895151_8895641_8895742_8896998_8897100_8898359
H1_mix_00032176	chr16	-	541	1	FSM	ENSG00000220793.5	ENST00000484462.1	480	1	8	-69	8	69	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGCAAATGATCACTTGG	41	False	NA	NA	False	AATAAA	-43	NA	9156873	9156332	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_9156300_9156900
H1_mix_00032177	chr16	-	660	2	FSM	ENSG00000260362.1	ENST00000561538.1	660	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGATGCATTGCCTTTTG	NA	False	NA	NA	False	AATAAA	-22	NA	9676843	9666884	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_9667375_9676673
H1_mix_00032178	chr16	-	10040	1	Genic_Genomic	ENSG00000260362.1	novel	NA	NA	NA	NA	-81	0	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGATGCATTGCCTTTTG	NA	False	NA	NA	False	AATAAA	-22	NA	9676924	9666884	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr16_-_9666900_9676900
H1_mix_00032180	chr16	-	4942	5	FSM	ENSG00000213853.10	ENST00000359543.8	5097	5	0	155	0	-155	multi-exon	FALSE	canonical	3	200	junction_2	9.86154146165801	244	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCCCAGAGCAAGACTCTA	-7	True	NA	-6	True	AATAAA	-14	NA	10580598	10528576	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_10533093_10537927_10538075_10543569_10543661_10547539_10547678_10580548
H1_mix_00032181	chr16	-	3354	8	FSM	ENSG00000166676.17	ENST00000299866.13	3370	8	11	5	11	1	multi-exon	FALSE	canonical	3	16	junction_1	11.1976673955802	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTTGTGCGTTTTGTC	-10	True	NA	-5	True	AATAAA	-16	NA	10818783	10766679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_10769102_10770271_10770332_10771669_10771799_10773312_10773442_10774038_10774129_10774951_10775097_10818102_10818183_10818484
H1_mix_00032182	chr16	-	1398	3	FSM	ENSG00000182108.11	ENST00000469379.5	1393	3	0	-5	0	5	multi-exon	FALSE	canonical	3	5	junction_1	2.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGCCCTGCCTTTTTTTTT	370	False	NA	4	True	ATTAAA	-27	NA	10942131	10928885	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_10929560_10933843_10934005_10941568
H1_mix_00032183	chr16	-	1418	3	FSM	ENSG00000182108.11	ENST00000570992.1	626	3	-738	-54	4	3	multi-exon	FALSE	canonical	3	38	junction_1	120	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCCTGCCTTTTTTT	8	True	NA	2	True	ATTAAA	-25	NA	10942456	10928887	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_10929075_10929216_10929560_10941568
H1_mix_00032184	chr16	-	1574	2	FSM	ENSG00000182108.11	ENST00000331808.5	1569	2	0	-5	0	5	multi-exon	FALSE	canonical	3	278	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGCCCTGCCTTTTTTTTT	-4	True	NA	4	True	ATTAAA	-27	NA	10942468	10928885	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_10929560_10941568
H1_mix_00032185	chr16	-	2125	1	FSM	ENSG00000185338.7	ENST00000644787.1	1784	1	-4	-337	0	337	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGGAAAACTGAGTAAATC	-3	True	NA	29	True	NA	NA	NA	11256204	11254079	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11254100_11256200
H1_mix_00032186	chr16	-	1521	2	FSM	ENSG00000185338.7	ENST00000332029.4	1238	2	0	-283	0	283	multi-exon	TRUE	canonical	3	608	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATAAAGAGAGGCACAACC	-3	True	NA	-25	True	NA	NA	NA	11256204	11254133	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11255529_11256078
H1_mix_00032187	chr16	-	456	2	FSM	ENSG00000188897.9	ENST00000600548.1	456	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGAGAGCTGTCTGGGGC	NA	False	NA	NA	False	NA	NA	NA	11390454	11387189	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11387296_11390104
H1_mix_00032188	chr16	-	2440	4	FSM	ENSG00000189067.14	ENST00000622633.5	2440	4	0	0	0	0	multi-exon	FALSE	canonical	3	687	junction_3	242.910591690761	3830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCCCATTCATTCTCTG	2	True	NA	-12	True	AATAAA	-16	NA	11586919	11547721	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11549746_11553532_11553690_11556510_11556736_11586885
H1_mix_00032189	chr16	-	3156	4	FSM	ENSG00000189067.14	ENST00000571688.5	2632	4	80	-604	80	604	multi-exon	FALSE	canonical	3	51	junction_3	536.755893203688	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATTCTGTTATGTCCAT	NA	False	NA	NA	False	NA	NA	NA	11587483	11547117	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11549746_11553532_11553690_11556510_11556736_11587337
H1_mix_00032191	chr16	-	2225	4	FSM	ENSG00000189067.14	ENST00000570904.5	1118	4	0	-1107	0	0	multi-exon	FALSE	canonical	3	306	junction_3	417.923703829087	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTATTTATGAGTTCTTT	220	False	NA	-52	True	AATAAA	-19	NA	11587247	11547999	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11549746_11553532_11553690_11556510_11556736_11587150
H1_mix_00032192	chr16	-	364	2	FSM	ENSG00000189067.14	ENST00000574703.5	486	2	0	122	0	-122	multi-exon	FALSE	canonical	3	687	junction_1	0	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACGTTCCAGTTTTACCCC	2	True	NA	NA	False	NA	NA	NA	11586919	11556405	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11556736_11586885
H1_mix_00032194	chr16	-	3116	12	FSM	ENSG00000153066.13	ENST00000283033.10	3116	12	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_8	22.3828446703539	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCTTGAATGTCATTCAG	-53	True	NA	-5	True	AATAAA	-24	NA	11742857	11679082	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11679838_11684164_11684246_11687856_11687967_11688302_11688446_11691289_11692083_11698124_11698326_11700451_11700565_11721576_11721671_11730644_11730775_11733981_11734080_11736016_11736234_11742476
H1_mix_00032196	chr16	-	919	5	FSM	ENSG00000153066.13	ENST00000573174.1	919	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	37.4866642954531	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGACGAGGTAAGAGCTGT	10	True	NA	NA	False	NA	NA	NA	11742794	11698133	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11698326_11721576_11721671_11733981_11734080_11736016_11736234_11742476
H1_mix_00032197	chr16	-	1140	2	FSM	ENSG00000122299.12	ENST00000570918.1	1410	2	264	6	264	0	multi-exon	FALSE	canonical	3	366	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCTTTCATTTTTTCCT	125	False	NA	-11	True	AATAAA	-14	NA	11752898	11750596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11751507_11752668
H1_mix_00032198	chr16	-	2940	4	FSM	ENSG00000122299.12	ENST00000575984.1	2632	4	-303	-5	-303	-2	multi-exon	FALSE	canonical	3	280	junction_2	39.4151691047439	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTTTCCTGTGGTCCTT	NA	False	NA	-2	True	AATAAA	-23	NA	11760153	11750587	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11751507_11752668_11752833_11756236_11756371_11758430
H1_mix_00032199	chr16	-	1928	10	FSM	ENSG00000122299.12	ENST00000571405.5	1930	10	0	2	0	0	multi-exon	FALSE	canonical	1	2	junction_4	92.6220249518053	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCTTTCATTTTTTCCT	NA	False	NA	-11	True	AATAAA	-14	NA	11765561	11750596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11751507_11752668_11752833_11756236_11756371_11758430_11758540_11761467_11761512_11761909_11762044_11762670_11762748_11763477_11763660_11765052_11765154_11765488
H1_mix_00032201	chr16	-	3814	23	FSM	ENSG00000122299.12	ENST00000355758.9	3805	23	0	-9	0	-2	multi-exon	TRUE	canonical	3	212	junction_12	34.3533233682897	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTTTCCTGTGGTCCTT	-25	True	NA	-2	True	AATAAA	-23	NA	11797258	11750587	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11751507_11752668_11752833_11756236_11756371_11758430_11758540_11761405_11761512_11761909_11762044_11762670_11762748_11763477_11763660_11765052_11765154_11765488_11765686_11767416_11767579_11768314_11768502_11769030_11769096_11770782_11770988_11774235_11774520_11774979_11775014_11776319_11776359_11776451_11776533_11776750_11776910_11779165_11779364_11781424_11781465_11782286_11782389_11797123
H1_mix_00032204	chr16	-	1947	10	NNC	ENSG00000171490.13	novel	5440	9	NA	NA	0	30149	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	749.169779172045	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGACAGAGAAGAAAAAAAG	21	True	NA	NA	False	AAAAAG	-2	NA	11851516	11803700	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_11803729_11837344_11838114_11839694_11839986_11841694_11841821_11841906_11842001_11846500_11846603_11846694_11846844_11847667_11847807_11850278_11850419_11851407
H1_mix_00032207	chr16	-	5332	9	FSM	ENSG00000171490.13	ENST00000571133.6	5440	9	0	108	0	-108	multi-exon	FALSE	canonical	3	1873	junction_2	223.478151896332	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGGGAGAAATTTGAGTG	-5	True	NA	NA	False	AATGAA	-13	NA	11851542	11833957	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11838114_11839694_11839986_11841694_11841821_11841906_11842001_11846500_11846603_11846694_11846844_11847667_11847807_11850278_11850419_11851407
H1_mix_00032208	chr16	-	4381	10	NNC	ENSG00000171490.13	novel	5440	9	NA	NA	0	-417	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	987.17666999265	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTACTGATTATGTATCG	21	True	NA	22	True	NA	NA	NA	11851516	11834266	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_11835014_11835628_11838114_11839694_11839986_11841695_11841821_11841906_11842001_11846500_11846603_11846694_11846844_11847667_11847807_11850278_11850419_11851407
H1_mix_00032215	chr16	-	7141	15	FSM	ENSG00000103342.13	ENST00000434724.7	7141	15	0	0	0	0	multi-exon	FALSE	canonical	3	1482	junction_12	202.815752819737	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTGTCGTTTGTAATTA	-1	True	NA	-4	True	AATAAA	-23	NA	11915956	11868127	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11873172_11875760_11875930_11876085_11876176_11877406_11877581_11883014_11883096_11885180_11885275_11886470_11886612_11886776_11886932_11887569_11887751_11891061_11891140_11894953_11894988_11896557_11896786_11897839_11897882_11897993_11898036_11915368
H1_mix_00032216	chr16	-	2509	15	FSM	ENSG00000103342.13	ENST00000439887.6	2509	15	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_12	416.930896491229	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTTCGGTATTTGAATT	804	False	NA	-18	True	AATAAA	-16	NA	11915878	11872678	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11873172_11875760_11875930_11876085_11876176_11877406_11877581_11883014_11883096_11885180_11885275_11886470_11886612_11886776_11886932_11887569_11887751_11891061_11891140_11894953_11894988_11896557_11896783_11897839_11897882_11897993_11898036_11915368
H1_mix_00032217	chr16	-	1329	1	FSM	ENSG00000261560.1	ENST00000568144.1	1495	1	-277	443	-277	-443	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGTGAATACACTAGATGG	9659	False	NA	NA	False	AATGAA	-36	NA	11882846	11881517	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11881500_11882800
H1_mix_00032218	chr16	-	389	2	FSM	ENSG00000234719.9	ENST00000540412.1	389	2	0	0	0	0	multi-exon	FALSE	canonical	3	531	junction_1	0	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCTACTCAGGAGGCTGA	NA	False	NA	NA	False	NA	NA	NA	11929343	11927594	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11927880_11929239
H1_mix_00032219	chr16	-	548	3	ISM	ENSG00000234719.9	ENST00000547494.5	921	8	12408	26	0	-26	3prime_fragment	FALSE	canonical	3	393	junction_2	69	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGATGATAATCTCAAGACA	NA	False	NA	NA	False	NA	NA	NA	11929637	11927620	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_11927880_11929239_11929276_11929384
H1_mix_00032221	chr16	-	6139	4	FSM	ENSG00000103381.12	ENST00000381774.9	6143	4	0	4	0	-4	multi-exon	FALSE	canonical	3	101	junction_1	18.6607133363712	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACCCAGTCTCAGGCAGT	-48	True	NA	-3	True	ATTAAA	-17	NA	12803887	12659802	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_12665116_12704623_12705050_12781184_12781404_12803706
H1_mix_00032222	chr16	-	1993	3	FSM	ENSG00000103381.12	ENST00000433677.6	1993	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	68.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGCTCTTCTTTTAGTGT	-12	True	NA	-1	True	ATTAAA	-16	NA	12803851	12663486	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_12665116_12781184_12781404_12803706
H1_mix_00032223	chr16	-	368	1	FSM	ENSG00000242307.1	ENST00000463867.1	348	1	-189	169	-189	-169	mono-exon	FALSE	NA	NA	NA	NA	NA	503	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTATGTGCTTCCCAAGA	NA	False	NA	NA	False	NA	NA	NA	13922868	13922500	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_13922500_13922900
H1_mix_00032224	chr16	-	3073	24	FSM	ENSG00000140694.17	ENST00000437198.7	3071	24	0	-2	0	1	multi-exon	FALSE	canonical	0	0	junction_21	77.9885358256381	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTTTTCTCCTCTCTTTT	3810	False	14630279	1	True	ATTAAA	-18	NA	14630260	14435698	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_14436773_14446887_14447082_14482637_14482828_14552020_14552096_14554064_14554152_14555653_14555710_14580873_14580944_14582180_14582292_14584346_14584423_14584748_14584792_14586317_14586362_14593300_14593379_14599903_14599961_14604145_14604227_14606483_14606527_14608280_14608320_14609057_14609124_14610643_14610810_14617589_14617651_14627105_14627188_14627268_14627337_14628171_14628252_14629596_14629675_14630106
H1_mix_00032225	chr16	-	2552	25	FSM	ENSG00000140694.17	ENST00000652051.1	2552	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	121.473526779843	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATCTTCTCGCACTGA	1	True	NA	NA	False	NA	NA	NA	14630235	14436311	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_14436773_14446887_14447082_14482637_14482828_14552020_14552096_14554064_14554152_14555653_14555710_14558372_14558490_14580873_14580944_14582180_14582292_14584346_14584423_14584748_14584792_14586317_14586362_14593300_14593379_14599903_14599961_14604145_14604227_14606483_14606527_14608280_14608320_14609057_14609124_14610643_14610810_14617589_14617651_14627105_14627188_14627268_14627337_14628171_14628252_14629596_14629675_14630106
H1_mix_00032226	chr16	-	636	4	FSM	ENSG00000069764.10	ENST00000438167.8	636	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	1.69967317119759	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGCATTCAGTTATTTG	NA	False	NA	NA	False	AATAAA	-20	NA	14694308	14672547	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_14672750_14688164_14688272_14690494_14690646_14694132
H1_mix_00032227	chr16	-	587	5	FSM	ENSG00000069764.10	ENST00000567462.1	587	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8.60232526704263	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTGAGTACAACTTAAAG	NA	False	NA	NA	False	NA	NA	NA	14694276	14672680	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_14672750_14678644_14678761_14688164_14688272_14690494_14690646_14694132
H1_mix_00032229	chr16	-	355	3	FSM	ENSG00000254609.1	ENST00000526173.1	355	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	2.5	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCCCCAGCAGCACCA	NA	False	NA	NA	False	NA	NA	NA	14733347	14727281	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_14727389_14729611_14729763_14733250
H1_mix_00032230	chr16	-	242	3	Antisense	novelGene_ENSG00000254852.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	59	junction_2	3	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGTTTCAGCTGTGAG	NA	False	NA	NA	False	NA	NA	NA	14765459	14765079	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr16_-_14765157_14765225_14765283_14765351
H1_mix_00032231	chr16	-	765	2	FSM	ENSG00000255277.3	ENST00000542005.2	706	2	-51	-8	-51	8	multi-exon	FALSE	canonical	3	34	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTCTGCTCATCCATCC	NA	False	NA	-16	True	AATAAA	-21	NA	14824753	14822423	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_14823069_14824633
H1_mix_00032232	chr16	-	1901	1	FSM	ENSG00000207425.1	ENST00000384694.1	100	1	-1068	-733	-1068	733	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTTCGGTGGCATGAAGG	NA	False	NA	NA	False	ATTAAA	-21	NA	14916624	14914723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_14914700_14916600
H1_mix_00032233	chr16	-	245	2	Antisense	novelGene_ENSG00000183426.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGGCTCAGGGAGTTAT	NA	False	NA	NA	False	NA	NA	NA	14952066	14951764	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr16_-_14951838_14951894
H1_mix_00032234	chr16	-	2408	1	FSM	ENSG00000261819.1	ENST00000567634.1	1902	1	-428	-78	-428	78	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTTTGGAAGCACCCGCC	NA	False	NA	NA	False	NA	NA	NA	14990588	14988180	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_14988200_14990600
H1_mix_00032235	chr16	-	1213	10	FSM	ENSG00000157045.9	ENST00000287706.8	1210	10	0	-3	0	0	multi-exon	FALSE	canonical	3	507	junction_9	106.15397621694	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTGAGACTTATTTTT	0	True	NA	-1	True	AATAAA	-20	NA	15056074	15037853	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_15038211_15038573_15038688_15039968_15040067_15041067_15041122_15041622_15041677_15044333_15044408_15047441_15047551_15047854_15047921_15047996_15048100_15055890
H1_mix_00032236	chr16	-	1115	9	FSM	ENSG00000157045.9	ENST00000624579.3	1115	9	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_8	231.834497810399	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTGAGACTTATTTTT	-5	True	NA	-1	True	AATAAA	-20	NA	15056079	15037853	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_15038211_15038573_15038688_15039968_15040067_15041067_15041122_15041622_15041677_15044333_15044408_15047441_15047551_15047854_15047921_15055890
H1_mix_00032237	chr16	-	448	3	FSM	ENSG00000157045.9	ENST00000567030.5	454	3	0	6	0	-6	multi-exon	FALSE	canonical	3	107	junction_2	345	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGGCTTGACTTTGAAC	167	False	NA	NA	False	NA	NA	NA	15055943	15047221	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_15047551_15047854_15047921_15055890
H1_mix_00032238	chr16	-	3717	18	FSM	ENSG00000085721.13	ENST00000198767.11	3706	18	0	-11	0	11	multi-exon	FALSE	canonical	3	176	junction_6	20.9454721304669	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTTTTGTTTTTTTTT	NA	False	NA	-13	True	AATAAA	-27	NA	15094272	15060021	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_15061906_15063195_15063284_15065218_15065372_15068168_15068278_15070069_15070255_15071120_15071252_15072949_15073081_15074722_15074862_15076557_15076651_15079997_15080097_15083512_15083583_15084641_15084706_15085638_15085699_15086128_15086259_15086364_15086455_15091314_15091372_15092508_15092615_15094144
H1_mix_00032240	chr16	-	3262	17	NIC	ENSG00000270580.5	novel	2902	18	NA	NA	-192	425	combination_of_known_splicesites	FALSE	canonical	3	63	junction_16	71.9361424719869	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTGCTTTGTTTCAAT	NA	False	NA	-4	True	AATAAA	-39	NA	15131793	15104297	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_15104759_15106114_15106151_15106259_15106321_15107329_15107438_15110413_15110559_15110721_15110822_15114442_15114572_15118925_15119055_15125690_15125808_15127469_15127597_15127686_15127898_15127991_15128136_15128221_15128390_15129881_15130078_15130201_15130455_15130634_15130792_15131073
H1_mix_00032241	chr16	-	3179	18	NNC	ENSG00000270580.5	novel	2902	18	NA	NA	-192	425	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	81.9050847418791	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTGCTTTGTTTCAAT	NA	False	NA	-4	True	AATAAA	-39	NA	15131793	15104297	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_15104472_15104541_15104759_15106114_15106151_15106259_15106321_15107329_15107438_15110413_15110559_15110721_15110822_15114442_15114572_15118925_15119055_15125690_15125808_15127469_15127597_15127686_15127898_15127991_15128136_15128221_15128390_15129881_15130078_15130201_15130455_15130634_15130792_15131086
H1_mix_00032243	chr16	-	547	4	FSM	ENSG00000270580.5	ENST00000340301.5	547	4	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_3	30.6630432642003	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGGACATGATGGATCC	NA	False	NA	NA	False	NA	NA	NA	15125948	15110790	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_15110822_15114442_15114572_15118925_15119055_15125690
H1_mix_00032244	chr16	-	2493	8	FSM	ENSG00000250251.6	ENST00000424133.2	2493	8	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_7	52.2122825490286	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATCCCACAAAGAAAAGCT	NA	False	NA	NA	False	NA	NA	NA	15131499	15126658	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_15127597_15127686_15127898_15127991_15128136_15128221_15128390_15129881_15130078_15130201_15130455_15130634_15130792_15131073
H1_mix_00032245	chr16	-	579	4	FSM	ENSG00000250251.6	ENST00000546358.5	579	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	99.8309682524527	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGATGGCCCCACATGCTC	NA	False	NA	NA	False	NA	NA	NA	15133845	15132719	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_15132874_15133263_15133424_15133489_15133704_15133794
H1_mix_00032246	chr16	-	656	4	FSM	ENSG00000250251.6	ENST00000540075.1	656	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	95.9490605593521	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCACGAGCGGCAGCGC	NA	False	NA	NA	False	NA	NA	NA	15133857	15132842	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_15133062_15133263_15133424_15133489_15133704_15133794
H1_mix_00032248	chr16	-	705	4	FSM	ENSG00000250251.6	ENST00000538100.1	705	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	29.743346594939	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAGGAGGCCACCAACCA	NA	False	NA	NA	False	NA	NA	NA	15137156	15135303	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_15135430_15135648_15135756_15136566_15136751_15136868
H1_mix_00032249	chr16	-	1284	8	NNC	ENSG00000183793.14	novel	1084	8	NA	NA	-41	14	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_1	94.2606027165634	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATGTTATTGCTTTGTTT	NA	False	NA	NA	False	AATAAA	-35	NA	15378335	15363613	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_15364070_15365428_15365465_15365573_15365635_15366652_15366761_15369711_15369857_15370019_15370120_15373714_15373844_15378086
H1_mix_00032250	chr16	-	2874	2	FSM	ENSG00000166783.22	ENST00000551579.1	489	2	0	-2385	0	5	multi-exon	FALSE	canonical	3	62	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCCCAAGTGAGTGGTT	6962	False	NA	-13	True	AATAAA	-25	NA	15599171	15594381	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_15596938_15598853
H1_mix_00032252	chr16	-	7724	27	FSM	ENSG00000166783.22	ENST00000396368.8	7730	27	6	0	-6	0	multi-exon	FALSE	canonical	3	14	junction_17	10.5867087598962	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGTTTCCCAAGTGAG	-16	True	NA	-18	True	AATAAA	-20	NA	15643148	15594386	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_15596938_15598853_15599025_15600427_15600554_15600640_15600702_15601990_15602204_15604167_15604399_15608290_15608519_15609522_15609726_15610974_15611109_15611591_15611735_15612556_15612778_15615829_15616006_15617051_15617172_15617298_15617536_15620450_15620532_15621732_15621912_15622933_15623124_15624768_15624928_15625015_15625174_15625371_15625801_15630331_15630505_15631380_15631499_15633616_15633844_15634756_15634932_15635655_15636343_15639089_15639292_15643017
H1_mix_00032257	chr16	-	2040	3	FSM	ENSG00000133393.13	ENST00000573968.5	2039	3	0	-1	0	-1	multi-exon	FALSE	canonical	1	4	junction_1	274	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGGTGCAAAGGGTGTT	-2	True	NA	-12	True	AATAAA	-16	NA	15888602	15865719	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_15867517_15884007_15884206_15888557
H1_mix_00032262	chr16	-	1093	2	FSM	ENSG00000091262.17	ENST00000575728.1	714	2	-385	6	-330	-6	multi-exon	FALSE	canonical	3	42	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGAGCCTTTCTGCTCAT	NA	False	NA	NA	False	AATAAA	-15	NA	16223852	16221192	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_16221832_16223398
H1_mix_00032266	chr16	-	9402	13	NNC	ENSG00000103489.12	novel	9970	12	NA	NA	38	26603	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	20.1880052396356	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTACTACACTAGACCTCTA	43	False	NA	NA	False	NA	NA	NA	17470922	17075165	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_17075194_17102326_17109018_17117645_17117980_17127665_17127862_17134472_17134736_17138354_17138532_17141152_17141370_17158828_17158910_17198211_17198415_17200481_17200655_17258987_17259499_17358011_17358051_17470433
H1_mix_00032267	chr16	-	9682	12	FSM	ENSG00000103489.12	ENST00000261381.7	9970	12	38	250	38	-250	multi-exon	FALSE	canonical	3	48	junction_2	9.14348433504011	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAACCCGTACTGAGTA	43	False	NA	NA	False	NA	NA	NA	17470922	17102018	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_17109018_17117645_17117980_17127665_17127862_17134472_17134736_17138354_17138532_17141152_17141370_17158828_17158910_17198211_17198415_17200481_17200655_17258987_17259499_17358011_17358051_17470433
H1_mix_00032268	chr16	-	598	3	FSM	ENSG00000103489.12	ENST00000575674.1	598	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	4	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAGACTGAGCACGTGGT	492	False	NA	NA	False	NA	NA	NA	17259028	17198030	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_17198415_17200481_17200655_17258987
H1_mix_00032269	chr16	-	978	1	FSM	ENSG00000279415.1	ENST00000623371.1	978	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAATGCTTGCTTTATGCC	4888	False	NA	NA	False	AATAAA	-15	NA	17228000	17227022	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_17227000_17228000
H1_mix_00032271	chr16	-	391	5	FSM	ENSG00000214940.8	ENST00000545050.1	391	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	96.1154904268818	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGCCATGCCTAACTGA	NA	False	NA	NA	False	AAGAAA	-3	NA	18324235	18319257	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18319299_18319794_18319831_18319939_18320001_18321016_18321125_18324090
H1_mix_00032273	chr16	-	4151	18	NIC	ENSG00000205746.9	novel	6405	31	NA	NA	146	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_10	74.9690593617907	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCGCGGCCCGTGCCCCA	NA	False	NA	NA	False	NA	NA	NA	18352330	18341621	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_18341767_18342656_18342810_18343199_18343360_18343425_18343640_18343732_18344013_18344139_18344284_18345377_18345512_18345863_18346040_18346229_18346362_18347259_18348016_18348488_18348737_18349091_18349219_18349628_18349745_18349932_18350154_18350587_18350772_18350889_18351562_18351773_18351944_18352211
H1_mix_00032275	chr16	-	563	3	FSM	ENSG00000205746.9	ENST00000535716.5	563	3	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	16	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGTTGAGCGGGGTGT	NA	False	NA	NA	False	NA	NA	NA	18346148	18344139	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18344284_18345377_18345512_18345863
H1_mix_00032276	chr16	-	543	4	FSM	ENSG00000205746.9	ENST00000539740.1	543	4	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_3	22.553639765383	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGTTGAGCGGGGTGT	NA	False	NA	NA	False	NA	NA	NA	18346318	18344139	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18344284_18345377_18345512_18345863_18346040_18346229
H1_mix_00032277	chr16	-	2099	13	NIC	ENSG00000233024.7	novel	1495	10	NA	NA	59	8	intron_retention	FALSE	canonical	3	138	junction_1	71.6951009483912	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTATGTTATTGCTTTGT	NA	False	NA	NA	False	AATAAA	-33	NA	18379272	18358077	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_18358589_18359947_18359984_18360092_18360154_18361169_18361278_18364226_18364372_18364534_18364635_18368257_18368387_18374831_18375070_18376735_18376863_18376952_18377164_18377257_18377402_18377487_18377659_18379154
H1_mix_00032278	chr16	-	462	1	FSM	ENSG00000233024.7	ENST00000327792.6	462	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAGAATAAATAAATAATA	NA	False	NA	NA	False	AAGAAA	-5	NA	18358582	18358120	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18358100_18358600
H1_mix_00032280	chr16	-	2289	14	NNC	ENSG00000233024.7	novel	1495	10	NA	NA	-1648	0	intron_retention	FALSE	canonical	3	77	junction_13	88.8096828240795	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCAGAGGCAGAGGAAAAT	NA	False	NA	NA	False	NA	NA	NA	18380979	18361224	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_18361278_18364226_18364372_18364534_18364635_18368257_18368387_18374831_18375070_18376735_18376863_18376952_18377164_18377257_18377402_18377487_18377659_18379154_18379351_18379474_18379728_18379907_18380065_18380516_18380711_18380808
H1_mix_00032281	chr16	-	424	3	ISM	ENSG00000254681.6	ENST00000532415.5	10291	32	19179	7361	1743	825	internal_fragment	FALSE	canonical	3	200	junction_1	7.5	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGATGGCCCCACATGCTC	NA	False	NA	NA	False	NA	NA	NA	18382761	18381881	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_18382036_18382425_18382586_18382651
H1_mix_00032282	chr16	-	1482	5	ISM	ENSG00000254681.6	ENST00000532415.5	10291	32	9107	14925	-1914	-3595	internal_fragment	FALSE	canonical	3	45	junction_4	28.9006920332369	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGTGCCGGCCGTGCTGT	9206	False	NA	NA	False	NA	NA	NA	18392833	18389445	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_18389535_18389713_18389846_18390744_18391501_18391973_18392222_18392576
H1_mix_00032283	chr16	-	1205	2	ISM	ENSG00000254681.6	ENST00000532415.5	10291	32	6517	19580	-4504	871	intron_retention	FALSE	canonical	3	60	junction_1	0	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCAGCGCTTCCTGGTCTC	6616	False	NA	NA	False	NA	NA	NA	18395423	18394100	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_18394253_18394370
H1_mix_00032284	chr16	-	3919	32	FSM	ENSG00000185164.15	ENST00000381474.7	3911	32	0	-8	0	3	multi-exon	TRUE	canonical	3	26	junction_1	495.190271296479	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGTATTTCTTGGATGA	NA	False	NA	NA	False	AATAAA	-32	NA	18562106	18417321	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18417510_18417840_18417969_18418391_18418485_18424273_18424394_18426629_18426732_18429009_18429121_18430814_18430899_18431806_18431949_18433347_18433476_18434653_18434768_18519228_18519356_18519500_18519661_18520596_18520680_18520764_18520984_18523843_18523940_18524488_18524553_18527536_18527625_18529500_18529638_18531036_18531169_18531465_18531608_18533004_18533180_18538525_18538677_18538858_18538965_18542171_18542262_18542593_18542732_18543616_18543770_18547227_18547301_18549520_18549628_18551438_18551540_18554806_18554853_18557701_18557792_18561875
H1_mix_00032286	chr16	-	4242	31	FSM	ENSG00000185164.15	ENST00000622306.5	4235	31	0	-7	0	5	multi-exon	FALSE	canonical	3	575	junction_20	416.278967627346	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTATTTCTTGGATGAC	-1	True	NA	NA	False	AATAAA	-33	NA	18562097	18499919	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18500568_18500990_18501084_18506872_18506993_18509165_18509268_18511545_18511657_18513349_18513434_18514341_18514484_18515882_18516011_18517188_18517303_18519228_18519356_18519500_18519661_18520596_18520680_18520764_18520984_18523843_18523940_18524488_18524553_18527536_18527625_18529500_18529638_18531036_18531169_18531465_18531608_18533004_18533180_18538525_18538677_18538858_18538965_18542171_18542262_18542593_18542732_18543616_18543770_18547227_18547301_18549520_18549628_18551438_18551540_18554806_18554853_18557701_18557792_18561875
H1_mix_00032287	chr16	-	3926	32	FSM	ENSG00000185164.15	ENST00000621364.4	3921	32	0	-5	0	5	multi-exon	FALSE	canonical	3	26	junction_1	494.891547837208	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTATTTCTTGGATGAC	NA	False	NA	NA	False	AATAAA	-33	NA	18562112	18499919	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18500109_18500439_18500568_18500990_18501084_18506872_18506993_18509165_18509268_18511545_18511657_18513349_18513434_18514341_18514484_18515882_18516011_18517188_18517303_18519228_18519356_18519500_18519661_18520596_18520680_18520764_18520984_18523843_18523940_18524488_18524553_18527536_18527625_18529500_18529638_18531036_18531169_18531465_18531608_18533004_18533180_18538525_18538677_18538858_18538965_18542171_18542262_18542593_18542732_18543616_18543770_18547227_18547301_18549520_18549628_18551438_18551540_18554806_18554853_18557701_18557792_18561875
H1_mix_00032289	chr16	-	293	1	FSM	ENSG00000260550.2	ENST00000602805.1	621	1	-31	359	-31	-352	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGGCCGAGAGGATGGAGA	NA	False	NA	NA	False	NA	NA	NA	18571099	18570806	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18570800_18571100
H1_mix_00032290	chr16	-	2203	5	FSM	ENSG00000134419.15	ENST00000322989.8	2203	5	0	0	0	0	multi-exon	FALSE	canonical	3	1333	junction_4	5357.45718601652	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATTTGTTGTCACCATT	-4	True	NA	-4	True	AATAAA	-18	NA	18790334	18781294	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18783103_18784737_18784824_18788062_18788143_18788980_18789119_18790243
H1_mix_00032291	chr16	-	424	4	FSM	ENSG00000134419.15	ENST00000574723.5	418	4	0	-6	0	0	multi-exon	FALSE	canonical	3	226	junction_2	4949.11610514668	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTCGTTTTGAGCCTT	8415	False	NA	-23	True	AATAAA	-26	NA	18790362	18782955	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18783103_18784737_18784824_18788980_18789119_18790309
H1_mix_00032292	chr16	-	525	5	FSM	ENSG00000134419.15	ENST00000563390.5	525	5	0	0	0	0	multi-exon	FALSE	canonical	3	6512	junction_4	3157.1567410409	5037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTCGTTTTGAGCCTT	8394	False	NA	-23	True	AATAAA	-26	NA	18790383	18782955	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18783103_18784737_18784824_18788062_18788143_18788980_18789119_18790309
H1_mix_00032293	chr16	-	803	5	FSM	ENSG00000134419.15	ENST00000565420.5	802	5	0	-1	0	0	multi-exon	FALSE	canonical	3	238	junction_4	5826.7977644243	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGCTTCCACTTGGTC	8517	False	NA	-35	True	AATAAA	-14	NA	18790260	18782967	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18783103_18784737_18784824_18788062_18788143_18788980_18789119_18789896
H1_mix_00032294	chr16	-	431	5	FSM	ENSG00000134419.15	ENST00000562935.5	427	5	0	-4	0	-2	multi-exon	FALSE	canonical	3	222	junction_3	5365.30625290859	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTCCACTTGGTCGTTT	-4	True	NA	-31	True	AATAAA	-18	NA	18790334	18782963	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18783103_18784737_18784824_18788062_18788106_18788980_18789119_18790309
H1_mix_00032296	chr16	-	593	6	FSM	ENSG00000134419.15	ENST00000576008.5	589	6	0	-4	0	-2	multi-exon	FALSE	canonical	3	48	junction_3	5772.98106700516	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTCCACTTGGTCGTTT	8415	False	NA	-31	True	AATAAA	-18	NA	18790362	18782963	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18783103_18784737_18784824_18786239_18786337_18788062_18788143_18788980_18789119_18790309
H1_mix_00032297	chr16	-	606	2	FSM	ENSG00000134419.15	ENST00000573554.1	606	2	0	0	0	0	multi-exon	FALSE	canonical	3	6512	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCCAGCCTGGGCGACAG	8437	False	NA	NA	False	NA	NA	NA	18790340	18788543	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18789119_18790309
H1_mix_00032298	chr16	-	2280	6	FSM	ENSG00000170540.15	ENST00000304414.12	2278	6	0	-2	0	2	multi-exon	FALSE	canonical	3	3644	junction_2	115.149641771045	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTCACTTTCTTTATAAC	-2	True	NA	-17	True	AATAAA	-18	NA	18801549	18791666	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18793371_18794598_18794684_18795463_18795582_18797924_18798045_18798700_18798835_18801430
H1_mix_00032299	chr16	-	1193	4	FSM	ENSG00000170540.15	ENST00000569976.5	778	4	29	-444	25	-58	multi-exon	FALSE	canonical	3	3713	junction_1	117.218693996402	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTGTCACATGAAGTTTT	28	False	NA	NA	False	AATAAA	-15	NA	18801519	18794731	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18795582_18797924_18798045_18798700_18798835_18801430
H1_mix_00032301	chr16	-	806	2	FSM	ENSG00000170540.15	ENST00000566391.1	806	2	0	0	0	0	multi-exon	FALSE	canonical	3	3988	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTAGAAGAAAAATGGCAAA	NA	False	NA	NA	False	NA	NA	NA	18801572	18798170	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18798835_18801430
H1_mix_00032302	chr16	-	16062	63	FSM	ENSG00000157106.18	ENST00000446231.7	16062	63	0	0	0	0	multi-exon	TRUE	canonical	2	26	junction_48	46.2788791070482	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGCATTTAAGTTCTGAA	6477	False	NA	-7	True	AATAAA	-18	NA	18926408	18804859	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18809647_18811760_18811868_18811947_18812128_18815174_18815282_18815439_18815652_18816301_18816530_18817290_18817471_18819501_18819655_18828030_18828169_18829285_18829756_18829925_18830116_18830218_18830370_18832939_18833167_18834203_18834439_18834891_18835165_18835932_18836213_18836359_18836533_18837252_18837444_18838013_18838233_18838356_18838467_18838550_18838690_18839697_18839947_18841564_18841795_18842207_18842455_18845428_18845652_18847452_18847608_18847815_18848034_18849216_18849379_18849948_18850127_18850236_18850468_18852066_18852206_18852317_18852463_18853582_18853868_18854655_18854905_18858169_18858291_18859021_18859182_18859555_18859704_18860666_18860777_18863649_18863852_18864001_18864145_18866620_18866776_18868189_18868355_18868522_18868720_18869103_18869304_18869853_18869995_18870609_18870712_18870800_18870889_18871363_18871483_18872183_18872346_18872493_18872625_18876123_18876394_18877130_18877233_18879494_18879720_18882164_18882339_18884069_18884168_18885089_18885163_18885540_18885667_18889371_18889586_18890862_18890922_18892217_18892355_18896051_18896208_18896792_18896957_18925949
H1_mix_00032304	chr16	-	1925	13	FSM	ENSG00000157106.18	ENST00000565224.5	2372	13	0	447	0	-108	multi-exon	FALSE	canonical	3	11	junction_12	95.059155558818	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTGTCATGTCAAGATG	7800	False	NA	NA	False	NA	NA	NA	18900044	18876054	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18876394_18877130_18877233_18879494_18879720_18882164_18882339_18884069_18884168_18885089_18885163_18885540_18885667_18889371_18889586_18890862_18890922_18892217_18892355_18896051_18896208_18896792_18896957_18899986
H1_mix_00032305	chr16	-	1259	10	FSM	ENSG00000157106.18	ENST00000532700.6	1259	10	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_9	21.0437521885437	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGTTTCTGGAAGACATG	6727	False	NA	NA	False	NA	NA	NA	18926158	18884104	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18884168_18885089_18885163_18885540_18885667_18889371_18889586_18890862_18890922_18892217_18892355_18896051_18896208_18896792_18896957_18899986_18900045_18925949
H1_mix_00032306	chr16	-	562	5	FSM	ENSG00000157106.18	ENST00000569122.1	562	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	28.831406486677	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTACATGACGTGCTTAA	7135	False	NA	NA	False	TTTAAA	-35	NA	18925750	18890888	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18890922_18892217_18892355_18896051_18896208_18896792_18896957_18925678
H1_mix_00032307	chr16	-	2912	6	FSM	ENSG00000006007.12	ENST00000353258.8	2907	6	0	-5	0	5	multi-exon	FALSE	canonical	3	209	junction_5	33.2746149489367	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTAAACTGCATGTACTTC	7	True	NA	-11	True	AATAAA	-33	NA	19522098	19501687	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_19503618_19504880_19505093_19507686_19507780_19510838_19510945_19517013_19517190_19521703
H1_mix_00032308	chr16	-	2238	6	FSM	ENSG00000006007.12	ENST00000564172.1	2238	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_5	88.843682949324	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGATAACTAGAAC	-18	True	NA	NA	False	NA	NA	NA	19522123	19502382	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_19503618_19504880_19505093_19507686_19507780_19510838_19510945_19517013_19517186_19521703
H1_mix_00032310	chr16	-	394	1	FSM	ENSG00000276571.1	ENST00000621246.1	394	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACTCTGCTCTGCTATTG	NA	False	NA	0	True	AATACA	-16	NA	19694428	19694034	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_19694000_19694400
H1_mix_00032311	chr16	-	5597	6	NNC	ENSG00000103550.14	novel	6422	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	304.80524929863	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGCTGTCTGAGTTTCTG	-20	True	NA	-8	True	AATAAA	-30	NA	19718227	19701936	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_19702093_19702917_19707222_19710508_19710587_19711371_19711441_19714117_19715038_19718157
H1_mix_00032312	chr16	-	2190	5	NNC	ENSG00000103550.14	novel	6422	5	NA	NA	-24	4	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_4	318.86517527005	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCAGGGTGTTGTACTTTT	5	True	NA	-27	True	AATAAA	-27	NA	19718155	19706351	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_19707222_19710508_19710587_19711371_19711441_19714117_19715038_19717902
H1_mix_00032313	chr16	-	6422	5	FSM	ENSG00000103550.14	ENST00000219837.12	6422	5	0	0	0	0	multi-exon	FALSE	canonical	3	724	junction_3	34.928498393146	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGCTGTCTGAGTTTCTG	-20	True	NA	-8	True	AATAAA	-30	NA	19718227	19701936	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_19707222_19710508_19710587_19711371_19711441_19714117_19715038_19718157
H1_mix_00032315	chr16	-	2119	2	FSM	ENSG00000167191.12	ENST00000562348.1	2078	2	-41	0	-41	0	multi-exon	FALSE	canonical	3	913	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCTAGTCTCTGCTGTCT	9906	False	NA	-6	True	AATAAA	-19	NA	19862381	19858970	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_19860545_19861836
H1_mix_00032316	chr16	-	5152	4	FSM	ENSG00000167191.12	ENST00000300571.7	5144	4	0	-8	0	8	multi-exon	FALSE	canonical	3	782	junction_2	61.5196445590079	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTACAGAAAAGATTCCATT	7	True	NA	62	True	ATTAAA	-25	NA	19884848	19856682	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_19860545_19861836_19861974_19871815_19872847_19884726
H1_mix_00032319	chr16	-	4805	2	FSM	ENSG00000180269.8	ENST00000570682.2	4832	2	7	20	7	-20	multi-exon	FALSE	canonical	2	4	junction_1	0	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATCAAGCTAAATTAACACA	NA	False	NA	NA	False	NA	NA	NA	20073883	20028258	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_20032670_20073489
H1_mix_00032320	chr16	-	4357	4	FSM	ENSG00000066654.14	ENST00000396083.7	4357	4	0	0	0	0	multi-exon	FALSE	canonical	3	359	junction_2	17.5941909605289	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTTCTAATATTTTTT	-5	True	NA	-16	True	AATAAA	-16	NA	20741818	20733663	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_20737287_20737707_20737957_20738896_20739072_20741508
H1_mix_00032321	chr16	-	4115	5	FSM	ENSG00000066654.14	ENST00000381337.6	4122	5	0	7	0	-7	multi-exon	FALSE	canonical	3	109	junction_1	118.904110526087	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAAATTGGTGTTCTAAT	NA	False	NA	-23	True	AATAAA	-9	NA	20742084	20733670	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_20736359_20736859_20737287_20737707_20737957_20738896_20739072_20741508
H1_mix_00032322	chr16	-	2182	9	NIC	ENSG00000196678.14	novel	2903	10	NA	NA	19	-78	intron_retention	FALSE	canonical	3	21	junction_1	27.8138342376595	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCTAGTCTATTTTCAG	113	False	NA	NA	False	AATAAA	-1	NA	20806427	20797451	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_20798212_20799262_20799352_20799956_20800039_20800301_20800403_20801202_20801360_20802795_20802924_20803432_20803517_20803602_20803671_20805714
H1_mix_00032328	chr16	-	6153	3	FSM	ENSG00000188215.10	ENST00000324344.9	6136	3	0	-17	0	17	multi-exon	FALSE	canonical	3	74	junction_2	5.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACAGTGACTT	0	True	NA	-7	True	AATAAA	-32	NA	20900358	20854907	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_20860370_20862107_20862644_20900203
H1_mix_00032329	chr16	-	1244	8	FSM	ENSG00000103316.12	ENST00000572914.2	1244	8	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_5	15.8539250274344	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGCTTCGGTAACTTC	1	True	NA	-14	True	AATAAA	-19	NA	21278290	21258520	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_21258846_21261253_21261339_21262036_21262159_21267553_21267738_21269789_21269892_21275531_21275595_21277430_21277585_21278081
H1_mix_00032331	chr16	-	910	9	FSM	ENSG00000169246.16	ENST00000419180.6	910	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	401.708830342326	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAACTGATAACTCCCTG	NA	False	NA	NA	False	TTTAAA	-45	NA	21425322	21405172	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_21405294_21406653_21406690_21406798_21406860_21410933_21411130_21411241_21411342_21414956_21415086_21419489_21419576_21424978_21425137_21425299
H1_mix_00032332	chr16	-	3657	3	ISM	ENSG00000169246.16	ENST00000419180.6	910	9	14928	96	4883	-96	3prime_fragment	FALSE	canonical	3	1067	junction_2	38.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATTCTTCAGGATTGCCC	NA	False	NA	NA	False	NA	NA	NA	21410394	21405268	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_21405294_21406653_21406690_21406798
H1_mix_00032340	chr16	-	2091	9	NIC	ENSG00000180747.15	novel	2774	12	NA	NA	-146	-8028	combination_of_known_junctions	FALSE	canonical	3	36	junction_8	39.384125926571	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCAGTCAGTATTTTAAAC	NA	False	NA	NA	False	NA	NA	NA	21520590	21471232	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_21471752_21472672_21472746_21473123_21473250_21476598_21476813_21478090_21478147_21479441_21479579_21484371_21484536_21487577_21487617_21519827
H1_mix_00032341	chr16	-	589	4	FSM	ENSG00000180747.15	ENST00000437413.2	589	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	17.7451088722749	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAAATCTTCTTCAGAGGA	16	True	NA	NA	False	NA	NA	NA	21520179	21479544	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_21479579_21484371_21484536_21487577_21487617_21519827
H1_mix_00032342	chr16	-	416	2	FSM	ENSG00000180747.15	ENST00000435197.2	416	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTCGTCCTGTGCTGCG	445	False	NA	NA	False	NA	NA	NA	21520010	21502088	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_21502322_21519827
H1_mix_00032343	chr16	-	3225	14	NIC	ENSG00000248124.9	novel	2131	14	NA	NA	10	0	intron_retention	FALSE	canonical	3	15	junction_3	19.4400915574828	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGCATGTGGTGTATCA	NA	False	NA	NA	False	AATAAA	-16	NA	21820410	21796629	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_21797113_21797749_21797859_21799649_21799835_21800706_21800838_21802635_21802729_21806130_21806230_21809645_21810839_21811777_21811838_21812285_21812416_21812521_21812612_21817461_21817519_21818655_21818762_21819108_21819482_21820294
H1_mix_00032344	chr16	-	1151	8	FSM	ENSG00000248124.9	ENST00000551681.2	1178	8	27	0	10	0	multi-exon	FALSE	canonical	2	6	junction_6	24.4365066476953	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTCAGGTTTGTGGGTT	NA	False	NA	NA	False	AATAAA	-20	NA	21820410	21810426	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_21810839_21811777_21811838_21812285_21812416_21812521_21812612_21817461_21817519_21818655_21818762_21819301_21819482_21820294
H1_mix_00032345	chr16	-	4036	8	FSM	ENSG00000185864.18	ENST00000682606.1	4020	8	0	-16	0	3	multi-exon	FALSE	canonical	3	118	junction_7	352.996906964538	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGCTTTGTTTCGATAT	NA	False	NA	NA	False	AATAAA	-41	NA	21857756	21834565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_21837745_21839104_21839141_21839249_21839311_21843385_21843582_21843693_21843794_21847412_21847542_21857258_21857417_21857579
H1_mix_00032346	chr16	-	910	9	FSM	ENSG00000185864.18	ENST00000542133.5	910	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_7	384.224218393375	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAACTGATAACTCCCTG	NA	False	NA	NA	False	TTTAAA	-45	NA	21857602	21837623	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_21837745_21839104_21839141_21839249_21839311_21843385_21843582_21843693_21843794_21847412_21847542_21851769_21851856_21857258_21857417_21857579
H1_mix_00032348	chr16	-	353	3	FSM	ENSG00000185864.18	ENST00000543660.1	353	3	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_2	327.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACCTCACAGCTGAAACT	NA	False	NA	NA	False	NA	NA	NA	21843480	21837692	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_21837745_21839104_21839311_21843385
H1_mix_00032349	chr16	-	1398	3	FSM	ENSG00000185864.18	ENST00000545367.5	846	3	-642	90	-642	-30	multi-exon	FALSE	canonical	3	1030	junction_2	31.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGCCACCTCCTCCAACT	NA	False	NA	NA	False	TTTAAA	-15	NA	21840520	21837653	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_21837745_21839104_21839141_21839249
H1_mix_00032354	chr16	-	968	7	FSM	ENSG00000185710.9	ENST00000380598.4	968	7	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_4	12.4855472002187	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATGTGAGTGCTACATC	NA	False	NA	NA	False	TATAAA	-15	NA	21889287	21884953	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_21885026_21885173_21885317_21886329_21886485_21887583_21887749_21887916_21888114_21888500_21888701_21889251
H1_mix_00032356	chr16	-	667	5	ISM	ENSG00000185710.9	ENST00000381448.8	868	7	2784	-10	2784	10	3prime_fragment	FALSE	canonical	3	126	junction_3	12.6885775404495	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGCTTTTGGGCATTT	NA	False	NA	NA	False	NA	NA	NA	21908588	21901541	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_21901715_21903448_21903547_21904467_21904541_21904918_21905045_21908391
H1_mix_00032360	chr16	-	711	4	FSM	ENSG00000140743.8	ENST00000561630.1	711	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	81.8141525382715	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGCAGCAGCTGGGGGC	2727	False	NA	NA	False	NA	NA	NA	22374437	22347633	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_22347824_22349278_22349444_22349700_22349850_22374230
H1_mix_00032362	chr16	-	10881	16	FSM	ENSG00000103404.15	ENST00000219689.12	10881	16	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	6.07581727470104	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACATTTCTCCTTTCTCC	-32	True	NA	-3	True	AATAAA	-25	NA	23149452	23061405	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_23069617_23072044_23072198_23073721_23073881_23079945_23080172_23082437_23082558_23084859_23084990_23085584_23085663_23087091_23087187_23087723_23087836_23090623_23090805_23102318_23102464_23105440_23105577_23106212_23106306_23106398_23106488_23108045_23108184_23148637
H1_mix_00032363	chr16	-	2006	3	ISM	ENSG00000103404.15	ENST00000219689.12	10881	16	75495	6594	-1409	-21	3prime_fragment	FALSE	canonical	3	53	junction_2	6.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAACCCCTGCCCTCCCAC	904	False	NA	-21	True	NA	NA	NA	23073957	23067999	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_23069617_23072044_23072198_23073721
H1_mix_00032364	chr16	-	2705	13	ISM	ENSG00000103404.15	ENST00000219689.12	10881	16	57	18136	57	-563	5prime_fragment	FALSE	canonical	3	54	junction_6	5.32029656650412	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAGGCTGGAGTACAGTA	25	True	NA	NA	False	ATTAAA	-20	NA	23149395	23079541	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_23080172_23082437_23082558_23084859_23084990_23085584_23085663_23087091_23087187_23087723_23087836_23090623_23090805_23102318_23102464_23105440_23105577_23106212_23106306_23106398_23106488_23108045_23108184_23148637
H1_mix_00032365	chr16	-	2943	17	FSM	ENSG00000168434.13	ENST00000307149.10	2935	17	0	-8	0	8	multi-exon	FALSE	canonical	3	88	junction_6	15.0244592248773	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTTCTTCTTTTTTTTT	-14	True	NA	7	True	AATAAA	-28	NA	23453189	23388484	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_23389087_23392379_23392524_23393232_23393348_23398045_23398130_23403693_23403835_23406075_23406263_23410294_23410361_23413447_23413565_23416966_23417122_23418699_23418828_23424748_23424948_23433544_23433668_23434635_23434719_23442476_23442646_23445047_23445165_23445812_23445962_23452825
H1_mix_00032367	chr16	-	5615	18	NNC	ENSG00000103365.15	novel	5973	17	NA	NA	0	1329	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	133.244370551769	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTATTTTTCTCTGTATT	25	True	NA	-4	True	AATAAA	-24	NA	23510448	23462212	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_23462327_23463967_23467701_23468885_23468997_23469995_23470166_23474903_23475062_23478367_23478502_23478882_23478912_23479764_23479888_23480644_23480771_23482922_23483005_23486014_23486153_23486709_23486791_23488605_23488710_23491676_23491801_23493359_23493459_23494302_23494379_23495693_23495779_23510320
H1_mix_00032368	chr16	-	7272	17	FSM	ENSG00000103365.15	ENST00000309859.8	5973	17	30	-1329	0	1329	multi-exon	FALSE	canonical	3	489	junction_1	35.1425112043804	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTATTTTTCTCTGTATT	9	True	NA	-4	True	AATAAA	-24	NA	23510464	23462212	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_23467701_23468885_23468997_23469995_23470166_23474903_23475062_23478367_23478502_23478882_23478912_23479764_23479888_23480644_23480771_23482922_23483005_23486014_23486153_23486709_23486791_23488605_23488710_23491676_23491801_23493359_23493459_23494302_23494379_23495693_23495779_23510320
H1_mix_00032372	chr16	-	5196	9	FSM	ENSG00000103356.18	ENST00000449606.7	5196	9	0	0	0	0	multi-exon	TRUE	canonical	3	182	junction_6	17.1464281994822	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGTGTGCTGTGCTATC	-1	True	NA	-28	True	AATAAA	-37	NA	23557350	23520753	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_23524455_23525243_23525380_23529501_23529633_23529743_23529898_23532656_23532766_23534887_23535361_23544513_23544704_23552148_23552305_23557204
H1_mix_00032374	chr16	-	665	5	FSM	ENSG00000004779.10	ENST00000007516.8	665	5	0	0	0	0	multi-exon	FALSE	canonical	3	3223	junction_2	123.704284485219	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCCCCCATCTTCAGT	-5	True	NA	-27	True	AATAAA	-14	NA	23596316	23581013	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_23581174_23582275_23582376_23585335_23585424_23587196_23587320_23596122
H1_mix_00032375	chr16	-	1027	4	FSM	ENSG00000004779.10	ENST00000570319.5	885	4	-96	-46	-71	46	multi-exon	FALSE	canonical	3	3223	junction_1	93.09970760188	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGTCTCAGGCAGGCTG	NA	False	NA	NA	False	NA	NA	NA	23596387	23581824	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_23582376_23585335_23585424_23587196_23587320_23596122
H1_mix_00032376	chr16	-	4123	13	FSM	ENSG00000083093.10	ENST00000261584.9	4008	13	25	-140	0	135	multi-exon	TRUE	canonical	1	44	junction_1	22.4405077680718	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGCAATATACTTTTTGT	10	True	NA	NA	False	NA	NA	NA	23641285	23603024	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_23603670_23607863_23608013_23614003_23614092_23621361_23621479_23622968_23623131_23624008_23624095_23626235_23626398_23629203_23629276_23629639_23630470_23634861_23636335_23637849_23637953_23638069_23638130_23641109
H1_mix_00032377	chr16	-	789	5	FSM	ENSG00000083093.10	ENST00000567003.1	789	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	53.4666952410564	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCTGGGAAAAGACTAAAG	-6	True	NA	NA	False	NA	NA	NA	23641301	23636034	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_23636335_23637849_23637953_23638069_23638130_23638458_23638593_23641109
H1_mix_00032380	chr16	-	458	1	FSM	ENSG00000279756.1	ENST00000623305.1	2251	1	823	970	823	-970	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCGTCGACGCTGAGGAAGC	NA	False	NA	NA	False	NA	NA	NA	23755116	23754658	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_23754700_23755100
H1_mix_00032381	chr16	-	625	1	Genic_Genomic	ENSG00000261669.1	novel	NA	NA	NA	NA	-397	-16061	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAGAAAAAGGGAGG	NA	False	NA	NA	False	AAAACA	-29	NA	24820136	24819511	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr16_-_24819500_24820100
H1_mix_00032383	chr16	-	3500	21	NIC	ENSG00000140750.17	novel	3495	20	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	113.807941287065	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTCATAATTCTTGGA	19	True	NA	-10	True	ATTAAA	-21	NA	25015329	24919392	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_24920261_24927683_24927733_24930783_24931405_24935469_24935640_24939363_24939598_24941986_24942144_24943770_24943863_24947481_24947596_24949403_24949485_24952288_24952371_24952930_24953043_24954602_24954731_24959670_24959753_24959910_24959980_24964196_24964309_24968350_24968428_24968660_24968773_24970506_24970581_24977214_24977320_24978965_24979006_25015208
H1_mix_00032384	chr16	-	3278	20	NIC	ENSG00000140750.17	novel	3219	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	136.316033326342	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTCATAATTCTTGGA	7	True	NA	-10	True	ATTAAA	-21	NA	25015341	24919392	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_24920261_24927683_24927733_24930783_24931405_24935469_24935640_24941986_24942144_24943770_24943863_24947481_24947596_24949403_24949485_24952288_24952371_24952930_24953043_24954602_24954731_24959670_24959753_24959910_24959980_24964196_24964309_24968350_24968428_24968660_24968773_24970506_24970581_24977214_24977320_24978965_24979006_25015208
H1_mix_00032385	chr16	-	3495	20	FSM	ENSG00000140750.17	ENST00000289968.11	3495	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	122.104741378196	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATAATTCTTGGAGGTA	-21	True	NA	-6	True	ATTAAA	-25	NA	25015369	24919388	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_24920261_24930783_24931405_24935469_24935640_24939363_24939598_24941986_24942144_24943770_24943863_24947481_24947596_24949403_24949485_24952288_24952371_24952930_24953043_24954602_24954731_24959670_24959753_24959910_24959980_24964196_24964309_24968350_24968428_24968660_24968773_24970506_24970581_24977214_24977320_24978965_24979006_25015208
H1_mix_00032389	chr16	-	553	1	FSM	ENSG00000275494.1	ENST00000613406.1	534	1	-20	1	-20	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCGGATTTGCTTAGTGAA	-2	True	NA	-2	True	AATAAA	-17	NA	25107122	25106569	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_25106600_25107100
H1_mix_00032390	chr16	-	2416	3	FSM	ENSG00000260034.1	ENST00000562280.1	2601	3	181	4	181	2	multi-exon	FALSE	canonical	1	1	junction_1	0.5	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGACAGTCCTTGTGCCTC	3	True	NA	10	True	AATAAA	-32	NA	25148851	25140580	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_25140859_25146247_25148240_25148705
H1_mix_00032392	chr16	-	273	1	FSM	ENSG00000230330.1	ENST00000433603.1	273	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGTGCATTTTTGATAA	NA	False	NA	NA	False	AAAACA	-43	NA	26032811	26032538	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_26032500_26032800
H1_mix_00032393	chr16	-	1042	8	FSM	ENSG00000169189.17	ENST00000361439.9	1042	8	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_7	5.01426536422407	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGTCTGTGTTCTCGAGC	-18	True	NA	-4	True	AATAAA	-22	NA	27268772	27224993	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_27225237_27225725_27225847_27226719_27226837_27233000_27233148_27234187_27234266_27235177_27235300_27257434_27257582_27268705
H1_mix_00032395	chr16	-	7015	37	FSM	ENSG00000077235.18	ENST00000561623.5	7015	37	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_29	76.2807719732798	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTTTTGTGTGTTTCCT	-8	True	NA	-8	True	ATTAAA	-16	NA	27549913	27460612	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_27461563_27462293_27462487_27463540_27463593_27464394_27464837_27465259_27465541_27469290_27469551_27470107_27470396_27471747_27471921_27476450_27476545_27478468_27478532_27481078_27481192_27483043_27483126_27484210_27484354_27485996_27486155_27488226_27488416_27488553_27488636_27489042_27489179_27489601_27489744_27492337_27492516_27492616_27492714_27493198_27493297_27494762_27494909_27495210_27495493_27497636_27497822_27498629_27498734_27501190_27501345_27502858_27502996_27505898_27506117_27506846_27507157_27508539_27508656_27511748_27511902_27528597_27528722_27533290_27533388_27537783_27537928_27538179_27538357_27545313_27545524_27549669
H1_mix_00032396	chr16	-	7090	37	FSM	ENSG00000077235.18	ENST00000356183.9	7090	37	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_3	96.3669203271191	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTTTTGTGTGTTTCCT	-8	True	NA	-8	True	ATTAAA	-16	NA	27549913	27460612	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_27461563_27462293_27462487_27463540_27463593_27464319_27464837_27465259_27465541_27469290_27469551_27470107_27470396_27471747_27471921_27476450_27476545_27478468_27478532_27481078_27481192_27483043_27483126_27484210_27484354_27485996_27486155_27488226_27488416_27488553_27488636_27489042_27489179_27489601_27489744_27492337_27492516_27492616_27492714_27493198_27493297_27494762_27494909_27495210_27495493_27497636_27497822_27498629_27498734_27501190_27501345_27502858_27502996_27505898_27506117_27506846_27507157_27508539_27508656_27511748_27511902_27528597_27528722_27533290_27533388_27537783_27537928_27538179_27538357_27545313_27545524_27549669
H1_mix_00032397	chr16	-	2798	1	FSM	ENSG00000077235.18	ENST00000564747.1	2798	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAAGTCCCTGTG	1559	False	NA	24	True	NA	NA	NA	27463473	27460675	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_27460700_27463500
H1_mix_00032398	chr16	-	4219	19	NNC	ENSG00000169180.12	novel	4537	24	NA	NA	-1070	5448	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	98.1200448933679	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACTCAGGTTTTTAATTT	NA	False	NA	NA	False	NA	NA	NA	28154279	28092527	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_28092554_28097975_28098640_28101457_28101689_28101846_28101946_28104545_28104708_28106042_28106215_28106382_28106498_28107521_28107678_28111816_28112007_28112903_28113051_28117317_28117463_28121669_28121763_28125688_28125849_28132333_28132404_28133840_28133934_28135215_28135325_28146093_28146204_28152658_28152786_28152929
H1_mix_00032399	chr16	-	4363	18	NNC	ENSG00000169180.12	novel	4537	24	NA	NA	-1070	5448	intron_retention	FALSE	non_canonical	0	0	junction_1	82.3814236459757	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACTCAGGTTTTTAATTT	NA	False	NA	NA	False	NA	NA	NA	28154279	28092527	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_28092554_28097975_28098640_28101457_28101689_28101846_28101946_28104545_28104708_28106042_28106215_28106382_28106498_28107521_28107678_28111816_28112007_28112903_28113051_28117317_28117463_28121669_28121763_28125688_28125849_28132333_28132404_28133840_28133934_28135215_28135325_28146093_28146204_28152658
H1_mix_00032401	chr16	-	4441	23	NIC	ENSG00000169180.12	novel	4537	24	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_22	84.5619241045547	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTGGGGAGCTGCTT	-13	True	NA	-5	True	AATAAA	-25	NA	28211960	28097975	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_28098640_28101457_28101689_28101846_28101946_28104545_28104708_28106042_28106215_28106382_28106498_28107521_28107678_28111816_28112007_28112903_28113051_28117317_28117463_28121669_28121763_28125688_28125849_28132333_28132404_28133840_28133934_28135215_28135325_28146093_28146204_28152658_28152786_28156073_28156528_28166507_28166586_28169749_28169910_28175897_28176096_28177219_28177333_28211365
H1_mix_00032409	chr16	-	3053	21	FSM	ENSG00000205609.13	ENST00000398944.7	3053	21	0	0	0	0	multi-exon	FALSE	canonical	2	96	junction_20	930.072119515471	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGCTTTTTGACATT	-8	True	NA	NA	False	NA	NA	NA	28403841	28379578	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_28379881_28379975_28380139_28380291_28380380_28380467_28380534_28380631_28380792_28383117_28383482_28388057_28388283_28388507_28388699_28390290_28390385_28390519_28390646_28390839_28390982_28391751_28391856_28391979_28392143_28399870_28399999_28400376_28400487_28400614_28400670_28400858_28400985_28401206_28401397_28401538_28401605_28403517_28403649_28403782
H1_mix_00032410	chr16	-	2914	21	FSM	ENSG00000205609.13	ENST00000380876.5	2913	21	0	-1	0	1	multi-exon	FALSE	canonical	3	2702	junction_12	503.475845994622	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTTGATTGCTTGTTG	-8	True	NA	NA	False	ACTAAA	-17	NA	28403841	28379713	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_28379881_28379975_28380139_28380291_28380380_28380467_28380534_28380631_28380792_28383117_28383482_28388057_28388283_28388507_28388699_28390290_28390385_28390519_28390646_28390839_28390982_28391751_28391856_28391979_28392143_28399870_28399999_28400376_28400487_28400614_28400670_28400858_28400985_28401206_28401397_28401538_28401605_28403517_28403649_28403786
H1_mix_00032411	chr16	-	3413	15	FSM	ENSG00000188603.22	ENST00000567963.6	1452	15	38	-1999	0	-38	multi-exon	FALSE	canonical	3	44	junction_13	64.9621946573072	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCACCAGCATTTCATAAG	26	True	NA	NA	False	NA	NA	NA	28492036	28475433	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491713_28491836_28492019
H1_mix_00032412	chr16	-	1728	14	FSM	ENSG00000188603.22	ENST00000357857.14	1720	14	0	-8	0	0	multi-exon	FALSE	canonical	3	44	junction_13	56.0089806830991	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCGTTTTTGTCTCTAAAA	3565	False	NA	1	True	AATAAA	-27	NA	28492005	28477271	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491713
H1_mix_00032413	chr16	-	1876	15	FSM	ENSG00000188603.22	ENST00000359984.12	1876	15	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_10	33.9255637764654	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCGTTTTTGTCTCTAAAA	-12	True	NA	1	True	AATAAA	-27	NA	28492074	28477271	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491481_28491561_28491713
H1_mix_00032414	chr16	-	1692	16	FSM	ENSG00000188603.22	ENST00000636147.2	1685	16	0	-7	0	0	multi-exon	FALSE	canonical	3	65	junction_15	49.2474928859892	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCGTTTTTGTCTCTAAAA	-12	True	NA	1	True	AATAAA	-27	NA	28492074	28477271	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491481_28491561_28491713_28491836_28492019
H1_mix_00032416	chr16	-	629	3	FSM	ENSG00000176046.9	ENST00000324873.8	5291	3	0	4662	0	137	multi-exon	FALSE	canonical	1	4	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGCTTGGGTGTGTGTTC	-8	True	NA	NA	False	AATAAA	-18	NA	28538974	28537369	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_28537670_28538005_28538156_28538795
H1_mix_00032418	chr16	-	1096	8	FSM	ENSG00000197165.11	ENST00000335715.9	1031	8	-64	-1	-64	1	multi-exon	FALSE	canonical	0	0	junction_3	6.68534797531291	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGTCTCTATTCCAAGC	-6	False	NA	-2	True	AATAAA	-19	NA	28597114	28591941	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_28592141_28592262_28592444_28593251_28593347_28593441_28593569_28595366_28595465_28595549_28595676_28595782_28595935_28596996
H1_mix_00032419	chr16	-	1455	4	FSM	ENSG00000196502.13	ENST00000567998.5	7948	4	6493	0	1134	0	multi-exon	FALSE	canonical	3	23	junction_2	15.1730755689881	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATAAAATATGATTGTGG	2280	False	NA	11	True	AATAAA	-27	NA	28607786	28605590	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_28605934_28606055_28606237_28606760_28606856_28606950
H1_mix_00032420	chr16	-	1258	8	FSM	ENSG00000196502.13	ENST00000314752.12	1569	8	-13	324	-13	0	multi-exon	FALSE	canonical	3	20	junction_6	11.7438650940369	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATTGTGGGCCAGGCAG	9	False	28610066	20	True	AATAAA	-36	NA	28610057	28605581	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_28605934_28606055_28606237_28606760_28606856_28606950_28607078_28608290_28608389_28608477_28608604_28608707_28608860_28609930
H1_mix_00032422	chr16	-	1463	1	FSM	ENSG00000275807.1	ENST00000614819.1	1539	1	51	25	51	-25	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTAGTGATTCGTTTGA	398	False	NA	-10	True	AGTAAA	-10	NA	28823918	28822455	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_28822500_28823900
H1_mix_00032423	chr16	-	2013	10	FSM	ENSG00000178952.11	ENST00000313511.8	2011	10	0	-2	0	2	multi-exon	TRUE	canonical	3	1397	junction_5	90.0634892659919	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTCTCAGTGAAGTTAT	14	False	28846362	-13	True	AATAAA	-18	NA	28846348	28842408	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_28843149_28843735_28843856_28843949_28844102_28844229_28844335_28844418_28844552_28844697_28844863_28844950_28845056_28845313_28845481_28845911_28846107_28846217
H1_mix_00032424	chr16	-	814	3	FSM	ENSG00000178952.11	ENST00000569217.1	814	3	0	0	0	0	multi-exon	FALSE	canonical	3	1649	junction_1	34	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGTTGGCCTGCCTGGCTG	2030	False	NA	-56	True	NA	NA	NA	28844332	28842837	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_28843149_28843735_28843856_28843949
H1_mix_00032425	chr16	-	543	2	FSM	ENSG00000260442.6	ENST00000566956.2	546	2	4	-1	4	1	multi-exon	FALSE	canonical	3	37	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGGACTCTGTTTTCTCA	-16	True	NA	-7	True	ATTAAA	-20	NA	28879932	28878955	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_28879108_28879541
H1_mix_00032426	chr16	-	548	2	NNC	ENSG00000260442.6	novel	546	2	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	105	junction_1	0	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGGGACTCTGTTTTCTC	-25	True	NA	-8	True	ATTAAA	-19	NA	28879941	28878956	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_28879105_28879541
H1_mix_00032427	chr16	-	416	3	NNC	ENSG00000260442.6	novel	437	3	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_2	12.5	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGGGACTCTGTTTTCTC	-4	True	NA	-8	True	ATTAAA	-19	NA	28879920	28878956	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_28879105_28879541_28879756_28879866
H1_mix_00032428	chr16	-	1848	13	FSM	ENSG00000177548.13	ENST00000358201.9	2307	13	22	437	0	-30	multi-exon	FALSE	canonical	3	75	junction_4	10.6258986548067	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTTCCACCGTCCCTGA	-9	True	NA	NA	False	NA	NA	NA	28925216	28904857	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_28905045_28905396_28905514_28905703_28905760_28905866_28905879_28906018_28906197_28908608_28908765_28910887_28910987_28911083_28911180_28914235_28914587_28914671_28914783_28919785_28919944_28924402_28924616_28925102
H1_mix_00032430	chr16	-	828	5	FSM	ENSG00000177548.13	ENST00000567483.5	841	5	13	0	13	0	multi-exon	FALSE	canonical	1	5	junction_4	37.9563894489452	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGGAGCAGCTGCAGACA	799	False	NA	NA	False	NA	NA	NA	28924924	28914258	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_28914587_28914671_28914783_28919785_28919944_28924402_28924616_28924906
H1_mix_00032431	chr16	-	783	2	FSM	ENSG00000177548.13	ENST00000564579.1	557	2	-12	-214	-11	207	multi-exon	FALSE	canonical	3	104	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACCTCTTGGTAATATAT	1001	False	NA	NA	False	ATTAAA	-19	NA	28924722	28919480	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_28919944_28924402
H1_mix_00032433	chr16	-	1649	2	FSM	ENSG00000260908.1	ENST00000562618.1	1840	2	102	89	102	-89	multi-exon	FALSE	canonical	2	8	junction_1	0	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGGCCTGAACCTGGGA	NA	False	NA	NA	False	NA	NA	NA	29107609	29103745	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_29105140_29107354
H1_mix_00032437	chr16	-	2953	5	FSM	ENSG00000261740.7	ENST00000569622.6	937	5	0	-2016	0	2016	multi-exon	FALSE	canonical	3	394	junction_3	984.792363902158	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATAAGGAGAAAGTGGG	3	True	NA	NA	False	NA	NA	NA	29454347	29441213	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_29443689_29444397_29444500_29446801_29446923_29454015_29454114_29454190
H1_mix_00032438	chr16	-	1305	5	FSM	ENSG00000261740.7	ENST00000568556.2	1305	5	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_3	994.003521120524	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTGCCATTATATTTA	375	False	NA	NA	False	AATAAA	-14	NA	29454651	29443269	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_29443689_29444397_29444500_29446801_29447027_29454015_29454114_29454190
H1_mix_00032442	chr16	-	3658	3	ISM	ENSG00000169203.17	ENST00000552123.1	464	5	734	70	734	-70	intron_retention	FALSE	canonical	3	599	junction_2	72	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGGATTGCCCTACTGGC	NA	False	NA	NA	False	NA	NA	NA	29490928	29485801	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_29485834_29487193_29487230_29487338
H1_mix_00032446	chr16	-	2526	14	NNC	ENSG00000288632.1	novel	2972	14	NA	NA	77	-66267	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	185.066723934078	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTTGCAGTGGCTCACG	85	False	NA	NA	False	NA	NA	NA	29613640	29509183	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_29509211_29545016_29545451_29546165_29546268_29548537_29548763_29551188_29551362_29553085_29553184_29554415_29554489_29554866_29554993_29558664_29558879_29560156_29560216_29561514_29561652_29565350_29565507_29566085_29566250_29613102
H1_mix_00032447	chr16	-	2791	14	Fusion	ENSG00000205534.6_ENSG00000279583.1	novel	4221	29	NA	NA	-384	-17141	multi-exon	FALSE	canonical	3	15	junction_13	183.115509831441	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTGATTTTGGAGTTT	-8	True	NA	NA	False	NA	NA	NA	29595350	29544708	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr16_-_29545451_29546165_29546268_29548537_29548763_29551188_29551362_29553085_29553184_29554415_29554489_29554866_29554993_29558664_29558879_29560156_29560216_29561514_29561652_29565350_29565507_29566085_29566250_29569270_29569329_29594886
H1_mix_00032449	chr16	-	1232	1	FSM	ENSG00000279583.1	ENST00000623486.1	1008	1	19	-243	19	243	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTGACCGGCCCGGGAC	NA	False	NA	NA	False	NA	NA	NA	29596118	29594886	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_29594900_29596100
H1_mix_00032451	chr16	-	1850	6	FSM	ENSG00000103502.14	ENST00000219789.11	1843	6	0	-7	0	7	multi-exon	FALSE	canonical	3	463	junction_4	11.2960169971544	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGAGTGTGGTCCTTAG	-18	True	NA	-6	True	AATAAA	-25	NA	29863226	29858349	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_29859335_29859441_29859524_29860580_29860663_29861105_29861260_29862585_29862721_29862814
H1_mix_00032453	chr16	-	3015	16	FSM	ENSG00000174938.15	ENST00000346932.9	3015	16	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_13	87.0510961064439	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGCCGGTGGAGTGTGGG	0	True	NA	-11	True	AATAAA	-21	NA	29899064	29871158	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_29871729_29872186_29872284_29872408_29872527_29872704_29872744_29873239_29873432_29873537_29873730_29876755_29876951_29877270_29877468_29878286_29878426_29879863_29880065_29885585_29885750_29887648_29887818_29888539_29888726_29896821_29897122_29897852_29897985_29898940
H1_mix_00032454	chr16	-	3173	18	FSM	ENSG00000174938.15	ENST00000350527.7	3173	18	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_16	90.3937561000123	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGCCGGTGGAGTGTGGG	7725	False	NA	-11	True	AATAAA	-21	NA	29899090	29871158	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_29871729_29872186_29872284_29872408_29872527_29872704_29872744_29873239_29873432_29873537_29873730_29876755_29876951_29877270_29877468_29878286_29878426_29879863_29880065_29885585_29885750_29887648_29887818_29888539_29888726_29895258_29895461_29895720_29895861_29896821_29896912_29897852_29897985_29898940
H1_mix_00032455	chr16	-	3801	17	FSM	ENSG00000174938.15	ENST00000308713.9	3801	17	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_3	78.8510264676371	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGCCGGTGGAGTGTGGG	10	True	NA	-11	True	AATAAA	-21	NA	29899547	29871158	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_29871729_29872186_29872284_29872408_29872527_29873239_29873432_29873537_29873730_29876755_29876951_29877270_29877468_29878286_29878426_29879863_29880065_29885585_29885750_29887648_29887818_29888539_29888726_29895258_29895461_29895720_29895861_29896821_29897122_29897852_29897985_29898940
H1_mix_00032456	chr16	-	3843	18	FSM	ENSG00000174938.15	ENST00000617533.5	3843	18	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_13	69.7347421021643	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGCCGGTGGAGTGTGGG	7	True	NA	-11	True	AATAAA	-21	NA	29899550	29871158	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_29871729_29872186_29872284_29872408_29872527_29872704_29872744_29873239_29873432_29873537_29873730_29876755_29876951_29877270_29877468_29878286_29878426_29879863_29880065_29885585_29885750_29887648_29887818_29888539_29888726_29895258_29895461_29895720_29895861_29896821_29897122_29897852_29897985_29898940
H1_mix_00032458	chr16	-	1708	6	FSM	ENSG00000174943.11	ENST00000568000.6	1716	6	8	0	-3	0	multi-exon	FALSE	canonical	3	76	junction_2	13.905394636615	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGCTGGCTCCTGGGGA	-24	True	NA	-4	True	AATAAA	-15	NA	29926218	29906338	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_29907109_29910977_29911174_29911814_29911868_29911959_29912050_29923189_29923360_29925789
H1_mix_00032459	chr16	-	2135	1	FSM	ENSG00000279789.1	ENST00000623731.1	2194	1	692	-633	692	633	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGATGGCGCCATTGCACT	8606	False	NA	NA	False	NA	NA	NA	29914645	29912510	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_29912500_29914600
H1_mix_00032460	chr16	-	4155	2	FSM	ENSG00000174943.11	ENST00000561540.2	4172	2	26	-9	-1	9	multi-exon	FALSE	canonical	3	118	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCCGGTTTCTCCAGTT	-16	True	NA	NA	False	AATAAA	-27	NA	29926210	29919625	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_29923360_29925789
H1_mix_00032466	chr16	-	1650	4	NNC	ENSG00000149927.18	novel	483	4	NA	NA	5	66	intron_retention	FALSE	canonical	1	1	junction_1	3.29983164553722	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGCCTGTGTGCGCTAC	8	True	NA	NA	False	GGGGCT	-35	NA	30021290	30010852	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_30012205_30013466_30013601_30015206_30015263_30021182
H1_mix_00032472	chr16	-	1601	4	FSM	ENSG00000090238.12	ENST00000398841.6	1601	4	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_1	3.85861230093008	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGGCTCGCGTGTAATC	8	True	NA	-35	True	AATAAA	-18	NA	30096213	30092313	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30092800_30094788_30094898_30095102_30095147_30095251
H1_mix_00032473	chr16	-	935	5	FSM	ENSG00000090238.12	ENST00000398838.8	935	5	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_4	71.8135606971274	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCGTTTGTACATAATAAAAC	17	False	30096261	-70	True	NA	NA	NA	30096244	30092348	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30092800_30094788_30094898_30095102_30095147_30095251_30095435_30096096
H1_mix_00032475	chr16	-	1084	5	FSM	ENSG00000090238.12	ENST00000566595.5	796	5	0	-288	0	0	multi-exon	FALSE	canonical	3	14	junction_4	147.550838696363	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCGTTTGTACATAATAAAAC	NA	False	NA	-70	True	NA	NA	NA	30096912	30092348	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30092800_30094788_30094898_30095102_30095147_30095251_30095435_30096615
H1_mix_00032479	chr16	-	2568	8	FSM	ENSG00000102882.12	ENST00000484663.5	2567	8	0	-1	0	0	multi-exon	FALSE	canonical	3	275	junction_4	33.3582899772168	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCTCTGTCTGTGTTC	-1	True	NA	-5	True	TATAAA	-24	NA	30122968	30114104	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30114709_30116635_30116791_30116893_30117004_30117153_30117286_30117669_30117785_30118046_30118164_30118348_30118539_30121823
H1_mix_00032480	chr16	-	1787	9	FSM	ENSG00000102882.12	ENST00000263025.9	1787	9	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_4	31.6336450634447	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCTCTGTCTGTGTTC	15	True	NA	-5	True	TATAAA	-24	NA	30123220	30114104	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30114709_30116635_30116791_30116893_30117004_30117153_30117286_30117669_30117785_30118046_30118164_30118348_30118539_30121823_30122007_30123039
H1_mix_00032481	chr16	-	1704	8	FSM	ENSG00000102882.12	ENST00000322266.9	1743	8	40	-1	25	0	multi-exon	FALSE	canonical	3	25	junction_3	114.457549389478	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCTCTGTCTGTGTTC	NA	False	NA	-5	True	TATAAA	-24	NA	30123269	30114104	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30114709_30116635_30116791_30116893_30117004_30117669_30117785_30118046_30118164_30118348_30118539_30121823_30122007_30123039
H1_mix_00032483	chr16	-	337	3	FSM	ENSG00000169627.9	ENST00000569282.2	335	3	0	-2	0	0	multi-exon	FALSE	canonical	3	126	junction_2	1140.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTGTGTCGATGTGTGT	0	True	NA	NA	False	ATTAAA	-17	NA	30193666	30192931	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30193075_30193357_30193418_30193532
H1_mix_00032484	chr16	-	689	2	FSM	ENSG00000169627.9	ENST00000567436.2	687	2	0	-2	0	0	multi-exon	FALSE	canonical	3	2651	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTGTGTCGATGTGTGT	-5	True	NA	NA	False	ATTAAA	-17	NA	30193697	30192931	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30193456_30193532
H1_mix_00032485	chr16	-	1015	3	FSM	ENSG00000169627.9	ENST00000305321.4	1012	3	0	-3	0	0	multi-exon	FALSE	canonical	3	2407	junction_1	122	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTGTGTCGATGTGTGT	62	False	NA	NA	False	ATTAAA	-17	NA	30194306	30192931	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30193075_30193357_30193456_30193532
H1_mix_00032488	chr16	-	2236	15	NIC	ENSG00000183604.15	novel	4219	29	NA	NA	-1735	-16	combination_of_known_splicesites	FALSE	canonical	3	11	junction_12	13.1996057455037	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTGGAGAAAATTAAAGTTA	NA	False	NA	NA	False	NA	NA	NA	30281705	30267568	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_30267673_30268401_30268562_30268935_30269084_30270055_30270166_30273028_30273231_30273378_30273522_30276012_30276168_30277263_30277429_30277596_30277794_30278180_30278381_30278932_30279074_30279692_30279795_30280442_30280562_30281266_30281426_30281574
H1_mix_00032490	chr16	-	3361	7	FSM	ENSG00000169217.9	ENST00000305596.8	3361	7	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_6	36.052816194516	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTCAGTTTGTGGTAATT	-34	True	NA	-8	True	AATAAA	-17	NA	30355308	30350772	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30353096_30353180_30353288_30353367_30353801_30353900_30354059_30354183_30354323_30354603_30354708_30355211
H1_mix_00032491	chr16	-	1401	6	FSM	ENSG00000169217.9	ENST00000569466.1	1417	6	16	0	16	0	multi-exon	FALSE	canonical	3	496	junction_2	30.5195019618604	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTTGGCTGTGCTG	441	False	NA	-33	True	AATAAA	-17	NA	30354918	30352846	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30353096_30353180_30353288_30353367_30353801_30353900_30354059_30354183_30354323_30354603
H1_mix_00032492	chr16	-	541	3	FSM	ENSG00000169217.9	ENST00000564525.1	541	3	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_2	29.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCAACTACTTCCTGAAC	-17	True	NA	NA	False	NA	NA	NA	30355291	30353965	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30354323_30354603_30354708_30355211
H1_mix_00032493	chr16	-	3582	9	FSM	ENSG00000169221.14	ENST00000409939.8	3580	9	0	-2	0	2	multi-exon	FALSE	canonical	3	108	junction_7	23.2150274606773	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTTCTGCCTTGTTATT	-32	True	NA	0	True	NA	NA	NA	30370494	30357099	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30358574_30358662_30358818_30359171_30359362_30359537_30359604_30359726_30359842_30364899_30365007_30365104_30365213_30365494_30365595_30369227
H1_mix_00032495	chr16	-	1129	4	NNC	ENSG00000179958.10	novel	1181	3	NA	NA	0	8670	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	530.436298406007	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGGGCGCGGTGGCTCAC	-20	True	NA	NA	False	AAAAAG	-2	NA	30430030	30414944	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_30414976_30423697_30424534_30429056_30429168_30429879
H1_mix_00032498	chr16	-	1182	3	FSM	ENSG00000179958.10	ENST00000319285.5	1181	3	0	-1	0	1	multi-exon	FALSE	canonical	3	1112	junction_2	13	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTTATTACCTGTTTT	-20	True	NA	-2	True	AGTAAA	-23	NA	30430030	30423613	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30424534_30429056_30429168_30429879
H1_mix_00032499	chr16	-	878	3	FSM	ENSG00000179958.10	ENST00000568973.5	878	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	568	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTACCAGGGGTGCCTCTGA	210	False	NA	48	True	NA	NA	NA	30429800	30423978	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30424534_30429056_30429168_30429588
H1_mix_00032501	chr16	-	2294	2	FSM	ENSG00000169957.10	ENST00000380412.7	2289	2	0	-5	0	5	multi-exon	FALSE	canonical	3	128	junction_1	0	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCCTTAAAATGTGTGC	-3	True	NA	-15	True	AATAAA	-22	NA	30526566	30523998	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30526052_30526325
H1_mix_00032502	chr16	-	3504	2	FSM	ENSG00000169955.8	ENST00000395094.3	3504	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTCTCTGAGAGCTTTGA	6255	False	30534965	-8	True	ATTAAA	-21	NA	30534918	30530366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30533149_30534196
H1_mix_00032503	chr16	-	3936	2	FSM	ENSG00000169955.8	ENST00000252799.3	3936	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTCTCTGAGAGCTTTGA	5826	False	NA	-8	True	ATTAAA	-21	NA	30535347	30530366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30533152_30534196
H1_mix_00032506	chr16	-	3175	2	ISM	ENSG00000169951.10	ENST00000252797.6	2738	3	-299	2	-188	-2	intron_retention	FALSE	canonical	1	5	junction_1	0	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATCTTTGCTTGTATTGC	NA	False	NA	-34	True	AGTAAA	-15	NA	30558562	30553765	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_30556111_30557732
H1_mix_00032510	chr16	-	1106	3	FSM	ENSG00000229809.9	ENST00000223459.11	1106	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	2.5	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCCAGTCTTTTGTTTA	5	True	NA	-11	True	AATAGA	-17	NA	30571714	30569725	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30570437_30571009_30571124_30571433
H1_mix_00032511	chr16	-	3152	3	FSM	ENSG00000197162.10	ENST00000395216.3	3208	3	0	56	0	-56	multi-exon	FALSE	canonical	3	16	junction_2	2.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCCAATATGGTGAAACCC	16	True	NA	NA	False	NA	NA	NA	30585697	30580711	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30583444_30585121_30585251_30585406
H1_mix_00032512	chr16	-	3659	3	FSM	ENSG00000156853.13	ENST00000287461.8	3557	3	-91	-11	-91	11	multi-exon	FALSE	canonical	3	74	junction_2	2.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGAATTACTTTTTACAAA	294	False	NA	NA	False	ATTAAA	-28	NA	30610480	30602546	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30605448_30609524_30609639_30609836
H1_mix_00032513	chr16	-	1014	3	FSM	ENSG00000156853.13	ENST00000565440.5	1153	3	139	0	139	0	multi-exon	FALSE	canonical	1	1	junction_2	39	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGAGCGGCTCCCTGGCCAT	NA	False	NA	NA	False	NA	NA	NA	30623809	30604617	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30605448_30609524_30609639_30623739
H1_mix_00032514	chr16	-	1363	9	FSM	ENSG00000196118.12	ENST00000543610.6	1363	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	5.69539287494726	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCTGAGCACCTTCTGG	27	True	NA	-5	True	AATAAA	-31	NA	30762062	30757422	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30757655_30759011_30759102_30759177_30759248_30759341_30759459_30759653_30759725_30760283_30760454_30760605_30760669_30761197_30761230_30761544
H1_mix_00032516	chr16	-	6083	3	FSM	ENSG00000102870.6	ENST00000262525.6	6083	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	12	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTGTTTCTTGTTTTTT	-13	True	NA	-7	True	AATAAA	-15	NA	30787205	30778455	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30784255_30784409_30784516_30787027
H1_mix_00032517	chr16	-	6238	2	NIC	ENSG00000102870.6	novel	6083	3	NA	NA	0	0	intron_retention	FALSE	canonical	3	42	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTGTTTCTTGTTTTTT	-13	True	NA	-7	True	AATAAA	-15	NA	30787205	30778455	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_30784516_30787027
H1_mix_00032518	chr16	-	2409	6	FSM	ENSG00000099385.12	ENST00000380317.8	2409	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	335.628008366406	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCAGCTCCTGTGTAGAGC	2767	False	NA	NA	False	NA	NA	NA	30894302	30833625	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30835149_30888859_30888946_30892585_30892748_30892839_30892949_30893211_30893291_30893852
H1_mix_00032519	chr16	-	1603	6	FSM	ENSG00000099385.12	ENST00000572628.5	1603	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	331.652468707833	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGAACGAATTGGGCTAT	3127	False	NA	NA	False	NA	NA	NA	30893942	30851245	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30852323_30888859_30888946_30892585_30892748_30892839_30892949_30893211_30893291_30893852
H1_mix_00032520	chr16	-	857	6	FSM	ENSG00000099385.12	ENST00000215115.5	857	6	0	0	0	0	multi-exon	FALSE	canonical	3	778	junction_1	47.50999894759	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTCATGTCATTTCC	-29	True	NA	-2	True	AATAAA	-14	NA	30894077	30887794	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30887991_30888859_30888946_30892585_30892748_30892839_30892949_30893211_30893291_30893852
H1_mix_00032521	chr16	-	3625	1	FSM	ENSG00000260852.1	ENST00000563777.1	3951	1	11	315	11	-315	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGTATTTAAAAAAATAAAAA	7	True	NA	NA	False	NA	NA	NA	30923258	30919633	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30919600_30923300
H1_mix_00032522	chr16	-	215	1	FSM	ENSG00000275263.1	ENST00000614997.1	328	1	112	1	112	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGGGACTGGACTGGTGT	NA	False	NA	-7	True	AATAAA	-14	NA	30957087	30956872	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30956900_30957100
H1_mix_00032527	chr16	-	876	3	FSM	ENSG00000167397.15	ENST00000300851.10	876	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	391	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGTCTGCCATGGACT	5	True	NA	-1	True	AATAAA	-30	NA	31094760	31090841	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_31091343_31093311_31093483_31094556
H1_mix_00032528	chr16	-	901	2	FSM	ENSG00000167397.15	ENST00000354895.4	901	2	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_1	0	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGTCTGCCATGGACT	-14	True	NA	-1	True	AATAAA	-30	NA	31094956	31090841	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_31091343_31094556
H1_mix_00032529	chr16	-	840	3	FSM	ENSG00000167397.15	ENST00000394975.3	840	3	0	0	0	0	multi-exon	FALSE	canonical	3	714	junction_2	41.5	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGTCTGAACCATGTGT	-32	True	NA	-13	True	AATAAA	-18	NA	31094797	31090853	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_31091343_31093311_31093422_31094556
H1_mix_00032530	chr16	-	1793	5	NIC	ENSG00000052344.16	novel	1837	6	NA	NA	2	0	intron_retention	TRUE	canonical	3	12	junction_4	268.720579785025	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCGTGCATGTGTGAAG	17	True	NA	-17	True	ATTAAA	-15	NA	31135701	31131432	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_31132336_31132428_31132596_31132681_31132954_31133225_31133389_31135413
H1_mix_00032531	chr16	-	1837	6	FSM	ENSG00000052344.16	ENST00000317508.11	1837	6	0	0	0	0	multi-exon	FALSE	canonical	3	606	junction_1	28.3083026690051	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCGTGCATGTGTGAAG	-9	True	NA	-17	True	ATTAAA	-15	NA	31135727	31131432	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_31132336_31132428_31132596_31132681_31132954_31133225_31133389_31135153_31135172_31135413
H1_mix_00032535	chr16	-	696	2	FSM	ENSG00000103490.14	ENST00000350605.4	696	2	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGTTTTCCTGCTTC	-5	True	NA	-13	True	AATATA	-18	NA	31202756	31201485	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_31201842_31202416
H1_mix_00032536	chr16	-	757	3	FSM	ENSG00000103490.14	ENST00000247470.10	757	3	0	0	0	0	multi-exon	FALSE	canonical	3	393	junction_1	5.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGTTTTCCTGCTTC	-9	True	NA	-13	True	AATATA	-18	NA	31202760	31201485	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_31201842_31202146_31202204_31202416
H1_mix_00032537	chr16	-	644	2	FSM	ENSG00000169900.8	ENST00000302964.4	589	2	-68	13	-68	-13	multi-exon	FALSE	canonical	3	36	junction_1	0	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCAGACTTTACTGGGGC	NA	False	NA	-17	True	AATAAA	-6	NA	31217203	31215974	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_31216158_31216742
H1_mix_00032538	chr16	-	408	3	FSM	ENSG00000156885.6	ENST00000287490.5	372	3	-36	0	-36	0	multi-exon	FALSE	canonical	1	3	junction_2	0.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCGGCTCTGTGGGGAG	27	False	NA	1	True	AATAAA	-16	NA	31428396	31427730	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_31427858_31428014_31428152_31428252
H1_mix_00032539	chr16	-	2443	4	FSM	ENSG00000140688.17	ENST00000568491.1	2422	4	0	-21	0	2	multi-exon	FALSE	canonical	3	149	junction_1	3.55902608401044	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACTGCAGCTGGACCCCC	NA	False	NA	-8	True	AATAAA	-33	NA	31493738	31489472	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_31490933_31492008_31492087_31492196_31492341_31492977
H1_mix_00032540	chr16	-	2796	13	FSM	ENSG00000140688.17	ENST00000327237.7	2785	13	0	-11	0	7	multi-exon	FALSE	canonical	3	139	junction_4	13.3624681685516	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGACCCCCAGCCCATTC	-2	True	NA	1	True	AATAAA	-42	NA	31508391	31489463	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_31490933_31492008_31492087_31492196_31492341_31492977_31493049_31493466_31493525_31493602_31493788_31493865_31493937_31496848_31496951_31499301_31499408_31499492_31499526_31500685_31500732_31507763_31507879_31508073
H1_mix_00032542	chr16	-	330	2	Intergenic	novelGene_520	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTAGGTCATCTCAATT	4494	False	NA	NA	False	NA	NA	NA	33695951	33689388	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_-_33689415_33695647
H1_mix_00032543	chr16	-	2902	1	FSM	ENSG00000279800.2	ENST00000624956.2	2609	1	-141	-152	-141	152	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTGATAAATAGTAGACTG	NA	False	NA	NA	False	NA	NA	NA	34268790	34265888	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_34265900_34268800
H1_mix_00032545	chr16	-	5401	13	FSM	ENSG00000171241.9	ENST00000303383.8	5177	13	11	-235	0	235	multi-exon	TRUE	canonical	3	79	junction_8	16.2685791225499	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGGTTTCTTGACAGTA	-18	True	NA	NA	False	ACTAAA	-38	NA	46621368	46578355	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_46582055_46583515_46583658_46584002_46584090_46595551_46595671_46599830_46599963_46603538_46603660_46603974_46604144_46604227_46604462_46608296_46608390_46615945_46616155_46617633_46617750_46618204_46618373_46621256
H1_mix_00032546	chr16	-	3144	1	FSM	ENSG00000261512.2	ENST00000574180.1	1591	1	-1499	-54	-1499	54	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGTGATCCGCCTGCCT	NA	False	NA	NA	False	NA	NA	NA	46625950	46622806	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_46622800_46626000
H1_mix_00032548	chr16	-	585	1	FSM	ENSG00000259856.1	ENST00000561790.1	589	1	31	-27	31	27	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCCACCTCCTTGCTCTC	NA	False	NA	NA	False	GGGGCT	-39	NA	46626961	46626376	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_46626400_46627000
H1_mix_00032549	chr16	-	6232	17	FSM	ENSG00000069329.18	ENST00000299138.12	6776	17	0	544	0	-544	multi-exon	TRUE	canonical	3	528	junction_3	61.7636624561724	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTCTTCAAATAAGTAAAAT	3	True	NA	NA	False	NA	NA	NA	46689178	46656675	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_46660652_46661717_46661862_46662242_46662483_46662982_46663163_46668929_46669053_46671704_46671861_46672264_46672473_46674313_46674463_46674563_46674661_46676582_46676693_46677314_46677399_46678942_46679157_46680670_46680854_46681376_46681501_46682078_46682176_46683507_46683607_46689130
H1_mix_00032550	chr16	-	4017	17	FSM	ENSG00000069329.18	ENST00000568784.6	4017	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	165.800602664013	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGAGCTTTTTTTCCCC	34	False	NA	-7	True	AATAAA	-15	NA	46689147	46659676	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_46660652_46661717_46661862_46662242_46662483_46662982_46663163_46668929_46669053_46671704_46671861_46672264_46672473_46674313_46674463_46674563_46674661_46676582_46676693_46677314_46677399_46678942_46679157_46680670_46680854_46681376_46681501_46682078_46682176_46683507_46683607_46688313
H1_mix_00032552	chr16	-	6643	3	FSM	ENSG00000155330.10	ENST00000394806.6	6640	3	0	-3	0	-1	multi-exon	TRUE	canonical	3	50	junction_1	133.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATCATGTATACTTACCA	1	True	NA	NA	False	AGTAAA	-17	NA	46831162	46796603	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_46803071_46824385_46824483_46831083
H1_mix_00032554	chr16	-	3008	9	FSM	ENSG00000069345.12	ENST00000317089.10	3008	9	0	0	0	0	multi-exon	FALSE	canonical	3	634	junction_7	43.6348484585429	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCAGTGTAGTCTGTCTTT	-3	True	NA	-9	True	AATAAA	-17	NA	46973674	46955361	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_46957221_46959002_46959131_46959274_46959420_46964610_46964808_46967512_46967647_46968083_46968165_46971348_46971573_46971895_46971956_46973494
H1_mix_00032555	chr16	-	6211	9	FSM	ENSG00000171208.10	ENST00000562435.6	7429	9	-39	1257	-39	-1257	multi-exon	TRUE	canonical	3	50	junction_4	7.36439916082772	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGTAAGCTTGTCAATC	3	True	NA	NA	False	TTTAAA	-24	NA	47143984	47078959	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_47083802_47086225_47086340_47109482_47109712_47122656_47122785_47122867_47122913_47128324_47128574_47129223_47129365_47131968_47132026_47143578
H1_mix_00032557	chr16	-	5357	5	FSM	ENSG00000171208.10	ENST00000562559.5	1327	5	0	-4030	0	-1257	multi-exon	FALSE	canonical	3	13	junction_1	25.5489725820824	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGTAAGCTTGTCAATC	NA	False	NA	NA	False	TTTAAA	-24	NA	47128458	47078959	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_47083802_47109482_47109712_47122656_47122785_47122888_47122913_47128324
H1_mix_00032558	chr16	-	3189	18	FSM	ENSG00000129636.13	ENST00000320640.11	3185	18	0	-4	0	0	multi-exon	TRUE	canonical	3	338	junction_13	43.3152122522417	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTCAGTGAGTTTTTAA	11	True	NA	NA	False	AATAAA	-20	NA	47461063	47154386	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_47155779_47158872_47158991_47161749_47161833_47162539_47162665_47218867_47218947_47237964_47238009_47258631_47258741_47260544_47260696_47311239_47311413_47313728_47313824_47365787_47365870_47375875_47375941_47428803_47428899_47451395_47451471_47452732_47452791_47454012_47454159_47459102_47459176_47460837
H1_mix_00032559	chr16	-	874	6	FSM	ENSG00000129636.13	ENST00000567957.1	924	6	50	0	50	0	multi-exon	FALSE	canonical	3	340	junction_3	16.7737890770094	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAATATGGTTTGAATA	2828	False	NA	-26	True	TATAAA	-35	NA	47238239	47155584	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_47155779_47158872_47158991_47161749_47161833_47162539_47162665_47218867_47218947_47237964
H1_mix_00032562	chr16	-	2417	2	FSM	ENSG00000196470.12	ENST00000356721.3	2415	2	0	-2	0	2	multi-exon	FALSE	canonical	2	13	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTGTCTGCTTTAGCT	NA	False	NA	-21	True	ATTAAA	-27	NA	48365901	48360528	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_48362431_48365386
H1_mix_00032564	chr16	-	7078	7	FSM	ENSG00000102921.8	ENST00000262384.4	7077	7	0	-1	0	1	multi-exon	FALSE	canonical	3	171	junction_2	28.4160557119073	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGGACAGTGCCTTCTTG	10	True	NA	-3	True	AATAAA	-18	NA	48610180	48538724	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_48543262_48546146_48546255_48548006_48548115_48551385_48551483_48553538_48553670_48560753_48562445_48609774
H1_mix_00032566	chr16	-	2447	3	FSM	ENSG00000102924.12	ENST00000219197.11	2442	3	-5	0	-5	0	multi-exon	FALSE	canonical	3	18	junction_1	0.5	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGACCCAGTTGCTTCGG	23	False	NA	2	True	AATAAA	-23	NA	49281843	49277916	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_49279602_49280922_49281043_49281201
H1_mix_00032567	chr16	-	7900	9	FSM	ENSG00000102935.12	ENST00000561648.5	7907	9	0	7	0	-7	multi-exon	FALSE	canonical	3	9	junction_8	492.532089690611	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAAAGACTGCTGGTTCT	NA	False	NA	-4	True	AATAAA	-17	NA	49827010	49487530	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_49491305_49523623_49523740_49525362_49525495_49626169_49626255_49635659_49638875_49730770_49730972_49789486_49789547_49822669_49822739_49826762
H1_mix_00032568	chr16	-	7961	8	FSM	ENSG00000102935.12	ENST00000563137.7	7968	8	0	7	0	-7	multi-exon	FALSE	canonical	3	1015	junction_4	73.193899600824	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAAAGACTGCTGGTTCT	-1	True	NA	-4	True	AATAAA	-17	NA	49856112	49487530	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_49491305_49523623_49523740_49525362_49525495_49626169_49626255_49635659_49638875_49730770_49730972_49789486_49789547_49855734
H1_mix_00032571	chr16	-	2145	17	FSM	ENSG00000166164.16	ENST00000394689.2	2145	17	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_4	102.880923280266	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGGAATGTGCTTGGGGC	271	False	NA	-29	True	AATAAA	-21	NA	50368779	50319029	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_50319267_50319886_50320031_50320247_50320392_50320662_50320778_50321981_50322039_50323586_50323699_50325747_50325884_50326283_50326392_50328668_50328745_50333573_50333698_50334710_50334896_50339975_50340087_50350022_50350168_50354424_50354483_50354792_50354923_50368089_50368299_50368725
H1_mix_00032575	chr16	-	4970	7	FSM	ENSG00000103460.17	ENST00000219746.14	4959	7	0	-11	0	11	multi-exon	FALSE	canonical	3	87	junction_5	12.6183288204985	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTATCTGATTAGTGTC	-7	True	NA	NA	False	AATAAA	-30	NA	52547143	52436405	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_52439969_52444275_52444357_52445993_52446222_52450276_52450547_52463933_52464189_52468508_52468575_52546636
H1_mix_00032576	chr16	-	3389	7	NIC	ENSG00000103460.17	novel	4959	7	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_5	30.7119231280332	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGGTTCCTTGAATAC	881	False	NA	-1	True	AATAAA	-18	NA	52547165	52438005	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_52439969_52444275_52444357_52445993_52446222_52450276_52450547_52463933_52464186_52468508_52468575_52546636
H1_mix_00032583	chr16	-	7440	27	FSM	ENSG00000103494.16	ENST00000647211.2	7935	27	0	495	0	-495	multi-exon	FALSE	canonical	3	10	junction_4	22.8692255944521	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAACAAAAACAACCTCTAG	-5	True	NA	NA	False	ATTAAA	-41	NA	53703859	53598647	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_53602189_53605480_53605615_53610966_53611052_53619024_53619209_53622218_53622357_53636438_53636513_53637694_53637855_53638309_53638412_53641032_53641117_53641284_53641476_53645624_53646004_53648963_53649116_53652534_53652988_53656471_53656590_53657452_53657633_53658413_53658465_53658771_53658879_53664869_53665010_53671509_53671584_53672869_53673017_53675016_53675123_53686432_53686577_53687862_53687966_53692065_53692365_53696150_53696296_53700638_53700731_53703802
H1_mix_00032584	chr16	-	7520	25	FSM	ENSG00000103494.16	ENST00000262135.9	7725	25	30	175	0	-175	multi-exon	TRUE	canonical	3	17	junction_6	21.8935239029465	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAGACTTCGATCATGACC	-5	True	NA	NA	False	NA	NA	NA	53703859	53598327	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_53602189_53605480_53605615_53610966_53611052_53619024_53619209_53636438_53636513_53637694_53637855_53641032_53641117_53641284_53641476_53645624_53646004_53648963_53649116_53652534_53652988_53656471_53656590_53657452_53657633_53658413_53658465_53658771_53658879_53664869_53665010_53671509_53671584_53672869_53673017_53675016_53675123_53686432_53686577_53687862_53687966_53692065_53692365_53696150_53696296_53700638_53700731_53703802
H1_mix_00032585	chr16	-	6678	26	FSM	ENSG00000103494.16	ENST00000621565.5	6678	26	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_7	21.8890292155682	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAGGCCACACTGAAAT	13	True	NA	NA	False	CATAAA	-20	NA	53703841	53599253	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_53602189_53605480_53605615_53610966_53611052_53619024_53619209_53636438_53636513_53637694_53637855_53638309_53638412_53641032_53641117_53641284_53641476_53645624_53646004_53648963_53649116_53652534_53652988_53656471_53656590_53657452_53657633_53658413_53658465_53658771_53658879_53664869_53665010_53671509_53671584_53672869_53673017_53675016_53675123_53686432_53686577_53687862_53687966_53692065_53692365_53696150_53696296_53700638_53700731_53703802
H1_mix_00032588	chr16	-	788	3	FSM	ENSG00000103494.16	ENST00000566096.5	893	3	79	26	0	-26	multi-exon	FALSE	canonical	3	95	junction_2	15.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTCTGAAGAAACAGTAT	-5	True	NA	NA	False	NA	NA	NA	53703859	53695656	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_53696296_53700638_53700731_53703802
H1_mix_00032590	chr16	-	2985	5	FSM	ENSG00000245694.11	ENST00000559598.7	1866	5	111	-1230	0	-248	multi-exon	FALSE	canonical	3	43	junction_4	109.130655638093	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCAAGTATATTGACTTT	3	True	NA	NA	False	NA	NA	NA	54928716	54916739	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_54919210_54920297_54920411_54923584_54923651_54925100_54925214_54928493
H1_mix_00032591	chr16	-	1615	5	FSM	ENSG00000245694.11	ENST00000502066.7	1603	5	0	-12	0	0	multi-exon	FALSE	canonical	3	278	junction_3	15.1739909054935	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTTTGACTCACCCGGC	8	True	NA	-18	True	ATTAAA	-14	NA	54928838	54917955	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_54919210_54920297_54920411_54923584_54923651_54925100_54925214_54928769
H1_mix_00032593	chr16	-	1883	5	FSM	ENSG00000245694.11	ENST00000660344.1	1883	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	116.448218105731	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTTTGACTCACCCGGC	-34	True	NA	-18	True	ATTAAA	-14	NA	54929189	54917955	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_54919210_54920297_54920328_54923584_54923651_54925100_54925214_54928769
H1_mix_00032595	chr16	-	7082	3	FSM	ENSG00000245694.11	ENST00000558952.2	4724	3	59	-2417	0	-248	multi-exon	FALSE	canonical	3	278	junction_1	19.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCAAGTATATTGACTTT	19	True	NA	NA	False	NA	NA	NA	54928827	54916739	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_54923651_54925100_54925214_54928769
H1_mix_00032596	chr16	-	6325	2	FSM	ENSG00000245694.11	ENST00000557792.2	6325	2	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGGTATAGGAAAAATAAAAT	-1	True	NA	-53	True	AATATA	-14	NA	54928847	54918966	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_54925214_54928769
H1_mix_00032599	chr16	-	4399	7	FSM	ENSG00000167005.14	ENST00000300291.10	4393	7	0	-6	0	6	multi-exon	TRUE	canonical	3	1151	junction_4	78.4615971174575	191	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATTGTTTTGGGATAGT	-5	True	NA	-1	True	AATAAA	-24	NA	56451332	56429126	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_56432734_56434330_56434446_56434753_56434830_56439656_56439747_56446625_56446690_56447788_56447990_56451086
H1_mix_00032601	chr16	-	956	3	FSM	ENSG00000125124.14	ENST00000566452.2	4062	3	2749	357	1446	0	multi-exon	FALSE	canonical	3	134	junction_2	5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCATTTGTATTTTGTA	NA	False	NA	40	True	TATAAA	-19	NA	56497250	56484344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_56484868_56485589_56485739_56496966
H1_mix_00032602	chr16	-	2708	17	FSM	ENSG00000125124.14	ENST00000245157.11	2704	17	0	-4	0	0	multi-exon	FALSE	canonical	0	0	junction_15	34.6896395736537	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTTGATTGATTATAAAAT	1	True	NA	4	True	ATTAAA	-21	NA	56520024	56484380	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498569_56499777_56499908_56500853_56501026_56501352_56501498_56502316_56502457_56502672_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519745
H1_mix_00032605	chr16	-	310	2	FSM	ENSG00000125144.14	ENST00000569500.5	305	2	0	-5	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGGTTCCTGTTGTGTT	29	False	NA	0	True	ATTAAA	-19	NA	56668034	56666729	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_56666971_56667965
H1_mix_00032606	chr16	-	416	3	FSM	ENSG00000125144.14	ENST00000379811.4	410	3	0	-6	0	6	multi-exon	FALSE	canonical	3	223	junction_2	23	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGTTGTGTTTTTGGA	-2	True	NA	6	True	ATTAAA	-25	NA	56668065	56666723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_56666971_56667311_56667381_56667965
H1_mix_00032607	chr16	-	413	3	FSM	ENSG00000125144.14	ENST00000444837.6	406	3	0	-7	0	6	multi-exon	FALSE	canonical	3	65	junction_2	102	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGTTGTGTTTTTGGA	-2	True	NA	6	True	ATTAAA	-25	NA	56668065	56666723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_56666971_56667311_56667378_56667965
H1_mix_00032608	chr16	-	4600	1	FSM	ENSG00000279019.1	ENST00000623921.1	3691	1	-811	-98	-811	98	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTCACAAGTTCAAGACCA	NA	False	NA	NA	False	NA	NA	NA	57145397	57140797	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_57140800_57145400
H1_mix_00032609	chr16	-	4392	7	NNC	ENSG00000172775.17	novel	2823	7	NA	NA	1231	0	intron_retention	FALSE	non_canonical	1	73	junction_6	305.653216716083	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTTTTCCTCTACTGA	9012	False	NA	-15	True	AATAAA	-18	NA	57177326	57152465	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_57154508_57164000_57164066_57167092_57167226_57172249_57172373_57172775_57172875_57173727_57173870_57175538
H1_mix_00032610	chr16	-	3325	7	NNC	ENSG00000172775.17	novel	2823	7	NA	NA	-665	0	intron_retention	FALSE	non_canonical	1	66	junction_6	307.624997178202	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTTTTCCTCTACTGA	7116	False	NA	-15	True	AATAAA	-18	NA	57179222	57152465	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_57154508_57164000_57164066_57167092_57167226_57172249_57172373_57172775_57172875_57173727_57173870_57178501
H1_mix_00032611	chr16	-	3978	8	NNC	ENSG00000172775.17	novel	2823	7	NA	NA	-786	0	intron_retention	FALSE	non_canonical	1	66	junction_6	331.746768435424	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTTTTCCTCTACTGA	3762	False	NA	-15	True	AATAAA	-18	NA	57182576	57152465	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_57154508_57164000_57164066_57167092_57167226_57172249_57172373_57172775_57172875_57173727_57173870_57178501_57178853_57181553
H1_mix_00032612	chr16	-	3628	7	NNC	ENSG00000172775.17	novel	2823	7	NA	NA	-787	0	intron_retention	FALSE	non_canonical	1	44	junction_6	313.882541725404	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTTTTCCTCTACTGA	3761	False	NA	-15	True	AATAAA	-18	NA	57182577	57152465	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_57154508_57164000_57164066_57167092_57167226_57172249_57172373_57172775_57172875_57173727_57173870_57181553
H1_mix_00032613	chr16	-	2709	8	NIC	ENSG00000172775.17	novel	2823	7	NA	NA	-34	0	intron_retention	FALSE	canonical	0	0	junction_3	382.975354884593	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTTTTCCTCTACTGA	482	False	NA	-15	True	AATAAA	-18	NA	57185856	57152465	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_57154508_57164000_57164066_57167092_57167227_57172250_57172373_57172775_57172875_57173727_57173870_57174619_57174689_57185820
H1_mix_00032615	chr16	-	2796	7	NNC	ENSG00000172775.17	novel	2823	7	NA	NA	6	0	intron_retention	FALSE	non_canonical	1	45	junction_6	313.596166359788	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTTTTCCTCTACTGA	17	True	NA	-15	True	AATAAA	-18	NA	57186016	57152465	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_57154508_57164000_57164066_57167092_57167226_57172249_57172373_57172775_57172875_57173727_57173870_57185824
H1_mix_00032616	chr16	-	2823	7	FSM	ENSG00000172775.17	ENST00000309137.13	2823	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	328.311209068469	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTTTTCCTCTACTGA	-6	True	NA	-15	True	AATAAA	-18	NA	57186039	57152465	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_57154508_57164000_57164066_57167092_57167227_57172250_57172373_57172775_57172875_57173727_57173870_57185820
H1_mix_00032619	chr16	-	2530	10	NNC	ENSG00000172775.17	novel	981	7	NA	NA	-786	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	20	junction_7	356.224960133652	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCAGAATCCACCTGTG	3762	False	NA	-26	True	NA	NA	NA	57182576	57154144	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_57154508_57164000_57164066_57167092_57167226_57172249_57172373_57172775_57172875_57173727_57173870_57174619_57174689_57175538_57175701_57178501_57178853_57181553
H1_mix_00032626	chr16	-	1503	4	FSM	ENSG00000102934.10	ENST00000219207.10	1497	4	0	-6	0	6	multi-exon	FALSE	canonical	3	30	junction_1	2.16024689946929	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGATGTTGGCAAATCACT	-4	True	NA	-4	True	AATAAA	-27	NA	57284672	57256090	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_57257030_57258461_57258585_57261896_57262071_57284405
H1_mix_00032627	chr16	-	1672	10	NNC	ENSG00000005194.15	novel	2021	9	NA	NA	0	9868	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	353.176380234516	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGTGGGGTGGGGGAGGA	25	False	NA	NA	False	AAAAAG	-2	NA	57447368	57418318	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_57418352_57428551_57429281_57430257_57430340_57431150_57431267_57432486_57432561_57434043_57434213_57436655_57436733_57439181_57439335_57440771_57440984_57447341
H1_mix_00032628	chr16	-	2053	9	FSM	ENSG00000005194.15	ENST00000394391.9	2021	9	17	-49	0	49	multi-exon	FALSE	canonical	3	932	junction_2	116.953984006531	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCCTGCTGGTGGATTTT	25	False	NA	31	True	NA	NA	NA	57447368	57428137	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_57429281_57430257_57430340_57431150_57431267_57432486_57432561_57434043_57434213_57436655_57436733_57439181_57439335_57440771_57440984_57447341
H1_mix_00032629	chr16	-	2029	9	FSM	ENSG00000005194.15	ENST00000567518.5	2016	9	0	-13	0	13	multi-exon	FALSE	canonical	3	163	junction_7	321.627016122713	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGATTTGATTCTCCAAGT	NA	False	NA	-5	True	AATAAA	-28	NA	57447419	57428173	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_57429281_57430257_57430340_57431150_57431267_57432486_57432561_57434043_57434213_57436655_57436733_57439181_57439296_57440771_57440984_57447341
H1_mix_00032630	chr16	-	1561	8	FSM	ENSG00000005194.15	ENST00000569370.5	1559	8	0	-2	0	2	multi-exon	FALSE	canonical	3	60	junction_2	379.433304617638	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATCTTGAGATTCTGCAT	-13	True	NA	-18	True	ATTAAA	-18	NA	57447406	57428551	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_57429281_57430257_57430340_57432486_57432561_57434043_57434213_57436655_57436733_57439181_57439335_57440771_57440984_57447341
H1_mix_00032631	chr16	-	910	6	FSM	ENSG00000005194.15	ENST00000569246.5	910	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	469.172718729467	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCTTGTGGGGAAGGGA	6460	False	NA	NA	False	NA	NA	NA	57440933	57431195	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_57431471_57432486_57432561_57434043_57434213_57436655_57436733_57439181_57439335_57440771
H1_mix_00032632	chr16	-	2767	9	FSM	ENSG00000125170.11	ENST00000340099.9	2767	9	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_8	45.071471021035	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTTCTGTTAATCAATAA	-10	True	NA	-4	True	AATAAA	-15	NA	57486493	57471960	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_57473496_57473612_57473737_57473900_57474040_57474792_57474983_57475099_57475220_57475505_57475621_57475849_57475958_57479441_57479689_57486304
H1_mix_00032633	chr16	-	2432	9	FSM	ENSG00000135736.6	ENST00000258214.3	2432	9	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	4.65698400254929	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAAGAATGAATGAATG	-6	True	NA	NA	False	AATAAA	-15	NA	57536571	57512180	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_57512871_57515340_57515445_57516292_57516464_57518067_57518278_57518624_57518742_57521067_57521177_57525900_57526128_57528592_57529325_57536499
H1_mix_00032635	chr16	-	3329	19	FSM	ENSG00000140859.16	ENST00000379655.8	3427	19	98	0	1	0	multi-exon	FALSE	canonical	3	58	junction_14	12.195425169371	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGGTCTGAAAAAGTTGG	-37	True	NA	-10	True	AATAAA	-19	NA	57802490	57758216	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_57758910_57759727_57759837_57760281_57760417_57760725_57760956_57761041_57761172_57761412_57761537_57762139_57762271_57764142_57764248_57765458_57765641_57766873_57766986_57769594_57769726_57769807_57769956_57770526_57770701_57771197_57771438_57771542_57771687_57772222_57772289_57794998_57795142_57798071_57798283_57802369
H1_mix_00032637	chr16	-	557	5	FSM	ENSG00000140859.16	ENST00000561524.5	577	5	20	0	20	0	multi-exon	FALSE	canonical	1	1	junction_3	38.022197464113	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCAGGAGATGCGGCGCTG	5445	False	NA	NA	False	NA	NA	NA	57797792	57771629	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_57771687_57772222_57772289_57785463_57785667_57794998_57795142_57797704
H1_mix_00032639	chr16	-	5274	2	FSM	ENSG00000166188.3	ENST00000299237.3	5027	2	-244	-3	-244	3	multi-exon	FALSE	canonical	3	15	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCACTGCTTGTTCTGCTC	402	False	NA	-4	True	AGTAAA	-22	NA	58000916	57994672	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_57998523_57999492
H1_mix_00032640	chr16	-	4768	2	FSM	ENSG00000166188.3	ENST00000562909.1	517	2	-859	-3392	-640	9	multi-exon	FALSE	canonical	1	6	junction_1	0	8408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTTCTGCTCCTTCTT	6	True	NA	2	True	AGTAAA	-28	NA	58001312	57994666	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_57998523_58000400
H1_mix_00032641	chr16	-	1281	6	FSM	ENSG00000070761.8	ENST00000262498.8	1281	6	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_1	31.2512399753994	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTCCTAGTTTGTCTTT	-8	True	NA	-3	True	AATAAA	-24	NA	58129381	58113591	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_58114031_58114809_58114921_58115268_58115458_58116040_58116153_58116871_58116952_58129031
H1_mix_00032642	chr16	-	481	3	FSM	ENSG00000070761.8	ENST00000564150.1	481	3	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_1	40	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGACGATGCAAAAACATA	471	False	NA	NA	False	TTTAAA	-14	NA	58115567	58113959	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_58114031_58114809_58114921_58115268
H1_mix_00032643	chr16	-	610	3	FSM	ENSG00000070761.8	ENST00000567092.1	710	3	0	100	0	-100	multi-exon	FALSE	canonical	3	420	junction_1	24	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTAAATTTGATATTAGTA	103	False	NA	NA	False	NA	NA	NA	58129300	58115891	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_58116153_58116871_58116952_58129031
H1_mix_00032645	chr16	-	1887	12	FSM	ENSG00000070770.10	ENST00000262506.8	1887	12	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	35.3966893908839	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATGGAGAGTTTTCAGTA	11	True	NA	NA	False	AATAAA	-16	NA	58198106	58157906	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_58158354_58164053_58164148_58165559_58165709_58166583_58166685_58167206_58167309_58167684_58167796_58168609_58168694_58174450_58174511_58184259_58184311_58186754_58186857_58196732_58196845_58197632
H1_mix_00032646	chr16	-	3703	1	ISM	ENSG00000070770.10	ENST00000563307.2	7382	9	25628	0	5873	0	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGAGGACCTTAACTTG	-1	True	NA	-16	True	AATAAA	-45	NA	58163253	58159550	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_58159600_58163300
H1_mix_00032647	chr16	-	5940	11	ISM	ENSG00000070770.10	ENST00000262506.8	1887	12	2	1645	2	-1	5prime_fragment	FALSE	canonical	3	146	junction_9	18.3684512139701	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTATGAGGACCTTAACTT	13	True	NA	-17	True	AATAAA	-44	NA	58198104	58159551	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_58164148_58165559_58165709_58166583_58166685_58167206_58167309_58167684_58167796_58168609_58168694_58174450_58174511_58184259_58184311_58186754_58186857_58196732_58196845_58197632
H1_mix_00032649	chr16	-	8411	49	FSM	ENSG00000125107.19	ENST00000317147.10	8411	49	0	0	0	0	multi-exon	FALSE	canonical	3	500	junction_30	153.794279983215	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGTCCACTGTGCCTTT	6	True	NA	-9	True	ATTAAA	-14	NA	58629826	58519950	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_58521037_58521182_58521318_58523369_58523503_58525178_58525360_58525988_58526139_58528474_58528649_58530245_58530348_58531957_58532076_58532231_58532396_58534146_58534396_58536988_58537221_58537890_58538061_58538157_58538267_58538771_58538915_58539767_58539960_58541500_58541621_58542230_58542336_58542427_58542569_58543606_58543904_58545360_58545492_58546320_58546499_58546671_58546750_58547185_58547297_58547565_58547683_58549718_58549899_58551131_58551273_58551588_58551820_58553781_58553861_58555250_58555538_58555783_58555909_58556846_58556994_58558472_58558675_58560211_58560363_58574608_58574761_58575006_58575130_58576462_58576583_58578698_58578940_58580632_58580761_58581344_58581516_58582792_58582904_58583055_58583183_58585337_58585507_58586544_58586749_58587200_58587256_58587344_58587414_58587779_58587879_58588798_58588907_58599235_58599512_58629727
H1_mix_00032650	chr16	-	7671	49	FSM	ENSG00000125107.19	ENST00000569240.5	7660	49	0	-11	0	0	multi-exon	TRUE	canonical	3	201	junction_30	171.496809929433	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCTTGGCTTTGTGCAA	-2	True	NA	-6	True	AATACA	-24	NA	58629834	58520683	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_58521037_58521182_58521318_58523369_58523503_58525178_58525360_58525988_58526139_58528474_58528649_58530245_58530348_58531957_58532076_58532231_58532396_58534146_58534396_58536988_58537221_58537890_58538061_58538157_58538267_58538771_58538915_58539767_58539960_58541500_58541621_58542230_58542336_58542427_58542569_58543606_58543904_58545360_58545492_58546320_58546499_58546671_58546750_58547185_58547297_58547565_58547683_58549718_58549899_58551131_58551273_58551588_58551820_58553781_58553861_58555250_58555538_58555783_58555909_58556861_58556994_58558472_58558675_58560211_58560363_58574608_58574761_58575006_58575130_58576462_58576583_58578698_58578940_58580632_58580761_58581344_58581516_58582792_58582904_58583055_58583183_58585337_58585507_58586544_58586749_58587200_58587256_58587344_58587414_58587779_58587879_58588798_58588907_58599235_58599512_58629727
H1_mix_00032651	chr16	-	1107	4	FSM	ENSG00000125107.19	ENST00000569924.1	493	4	-293	-321	-293	1	multi-exon	FALSE	canonical	3	1076	junction_1	20.7257220756131	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCTGGAACTTCTTGG	835	False	NA	-16	True	AATACA	-14	NA	58525674	58520693	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_58521037_58521182_58521318_58523369_58523503_58525178
H1_mix_00032652	chr16	-	1931	8	FSM	ENSG00000125107.19	ENST00000568917.1	1317	8	-614	0	-426	0	multi-exon	FALSE	canonical	3	159	junction_3	281.910247694372	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTGCAGTTTATCTC	6252	False	NA	NA	False	NA	NA	NA	58540492	58531957	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_58532076_58532231_58532396_58534146_58534396_58536967_58537221_58537890_58538061_58538157_58538267_58538771_58538915_58539767
H1_mix_00032659	chr16	-	496	4	FSM	ENSG00000125107.19	ENST00000568158.1	496	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	19.7989898732233	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGGGCTCGGCCGCCTGCT	74	False	NA	NA	False	ACTAAA	-22	NA	58629815	58599373	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_58599512_58623281_58623410_58624652_58624795_58629727
H1_mix_00032662	chr16	-	4051	12	FSM	ENSG00000103042.9	ENST00000219320.9	4058	12	27	-20	0	20	multi-exon	TRUE	canonical	3	106	junction_11	32.0930980453549	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGGGGACAGAGTCCAGG	16	True	NA	14	True	AATAAA	-39	NA	58684743	58665088	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_58667488_58670112_58670168_58671044_58671245_58672095_58672244_58675939_58676055_58676288_58676347_58677325_58677425_58678332_58678475_58678695_58678895_58679856_58680242_58683954_58684179_58684716
H1_mix_00032668	chr16	-	555	1	FSM	ENSG00000224631.4	ENST00000591758.1	566	1	22	-11	22	11	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCAACCTCATAATTTATA	NA	False	NA	NA	False	AATAAA	-41	NA	61055942	61055387	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_61055400_61055900
H1_mix_00032671	chr16	-	255	2	NNC	ENSG00000260668.1	novel	554	2	NA	NA	10	-284	at_least_one_novel_splicesite	FALSE	non_canonical	3	240	junction_1	0	27	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTCCTCATTTATGCCA	NA	False	NA	NA	False	NA	NA	NA	64261229	64260853	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_64261019_64261139
H1_mix_00032675	chr16	-	1356	3	NIC	ENSG00000260834.2	novel	696	3	NA	NA	-71	6	combination_of_known_junctions	FALSE	canonical	3	121	junction_2	312	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTGGTGGTCTCTTCA	NA	False	NA	-100	True	AATAAA	-23	NA	65235004	65229839	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_65230206_65233014_65233886_65234885
H1_mix_00032676	chr16	-	587	3	NNC	ENSG00000260834.2	novel	696	3	NA	NA	-71	6	at_least_one_novel_splicesite	FALSE	canonical	3	261	junction_2	242	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTGGTGGTCTCTTCA	NA	False	NA	-100	True	AATAAA	-23	NA	65235004	65229839	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_65230206_65233014_65233117_65234885
H1_mix_00032677	chr16	-	644	3	NNC	ENSG00000260834.2	novel	696	3	NA	NA	-71	6	at_least_one_novel_splicesite	FALSE	canonical	3	122	junction_2	311.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTGGTGGTCTCTTCA	NA	False	NA	-100	True	AATAAA	-23	NA	65235004	65229839	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_65230206_65233014_65233174_65234885
H1_mix_00032678	chr16	-	773	3	FSM	ENSG00000260834.2	ENST00000691011.1	696	3	-71	-6	-71	6	multi-exon	FALSE	canonical	3	159	junction_2	293	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTGGTGGTCTCTTCA	NA	False	NA	-100	True	AATAAA	-23	NA	65235004	65229839	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_65230206_65233014_65233303_65234885
H1_mix_00032679	chr16	-	491	2	NIC	ENSG00000260834.2	novel	696	3	NA	NA	-77	6	combination_of_known_splicesites	FALSE	canonical	3	1912	junction_1	0	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTGGTGGTCTCTTCA	NA	False	NA	-100	True	AATAAA	-23	NA	65235010	65229839	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_65230206_65234885
H1_mix_00032682	chr16	-	2745	9	FSM	ENSG00000166548.17	ENST00000527800.6	2745	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_8	3.39116499156263	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTCCTGAAGCTTTGGA	9	True	NA	-10	True	AATAAA	-16	NA	66549856	66510743	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_66512067_66513730_66513812_66517135_66517216_66517788_66517878_66528993_66529068_66531379_66531470_66536963_66537018_66541878_66541954_66548977
H1_mix_00032683	chr16	-	2862	6	NIC	ENSG00000183723.13	novel	3414	5	NA	NA	37	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	34.3336569564036	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGTTGTCTCTCCTCACT	546	False	NA	-17	True	AATAAA	-15	NA	66696670	66614749	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_66616716_66617230_66617359_66622061_66622223_66623403_66623503_66636404_66636582_66696339
H1_mix_00032684	chr16	-	8153	4	FSM	ENSG00000183723.13	ENST00000394106.7	8153	4	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	6.54896090146283	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGTTGTCTCTCCTCACT	-10	True	NA	-17	True	AATAAA	-15	NA	66696743	66614749	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_66622223_66623403_66623503_66636404_66636582_66696339
H1_mix_00032687	chr16	-	531	2	FSM	ENSG00000159593.15	ENST00000563221.5	532	2	0	1	0	-1	multi-exon	FALSE	canonical	3	1508	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAATGTAGTCTTGTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	66806069	66802880	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_66803119_66805776
H1_mix_00032689	chr16	-	1909	21	FSM	ENSG00000159593.15	ENST00000379463.6	1909	21	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_20	406.688136045299	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATGTAGTCTTGTTCTT	-33	True	NA	NA	False	AATAAA	-17	NA	66830976	66802879	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_66803119_66805776_66805827_66805911_66806027_66808520_66808614_66808988_66809076_66810373_66810414_66810696_66810773_66813563_66813698_66813786_66813847_66816580_66816673_66816964_66817029_66817424_66817488_66818527_66818638_66821449_66821560_66823226_66823307_66823528_66823601_66824854_66824886_66826522_66826584_66826676_66826781_66827979_66828078_66830846
H1_mix_00032690	chr16	-	1820	20	FSM	ENSG00000159593.15	ENST00000290810.8	1813	20	0	-7	0	4	multi-exon	FALSE	canonical	3	1311	junction_19	83.7365939987723	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGTTCTTTGTGGGGAG	-33	True	NA	NA	False	AATAAA	-26	NA	66830976	66802870	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_66803119_66805776_66805827_66805911_66806027_66808520_66808614_66808988_66809076_66810373_66810414_66810696_66810773_66813563_66813698_66813786_66813847_66816580_66816673_66816964_66817029_66817424_66817488_66818527_66818638_66821449_66821560_66823226_66823307_66823528_66823601_66824854_66824886_66826522_66826584_66826676_66826781_66830846
H1_mix_00032691	chr16	-	1654	19	FSM	ENSG00000159593.15	ENST00000394074.6	1654	19	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_18	320.845622660255	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTTCTTAATAAACATT	-12	True	NA	NA	False	NA	NA	NA	66830955	66802911	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_66803119_66805776_66805827_66805911_66806027_66808520_66808614_66808988_66809076_66810373_66810414_66810696_66810773_66813563_66813698_66813786_66813847_66816580_66816673_66816964_66817029_66817424_66817488_66818527_66818638_66821449_66821560_66823226_66823307_66823528_66823601_66824854_66824886_66826522_66826584_66830846
H1_mix_00032697	chr16	-	718	4	FSM	ENSG00000166595.12	ENST00000563490.1	718	4	0	0	0	0	multi-exon	FALSE	canonical	3	1062	junction_1	51.2315007262784	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCTGCATACTGGTATC	3766	False	66934428	-134	True	NA	NA	NA	66934417	66932185	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_66932301_66932779_66932826_66933613_66933740_66933986
H1_mix_00032699	chr16	-	1472	5	FSM	ENSG00000102871.16	ENST00000345057.9	1483	5	4	7	4	-7	multi-exon	FALSE	canonical	3	5	junction_3	3.20156211871642	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGAAATACAAGTAGTAGT	-2	True	NA	3	True	AATAAA	-21	NA	67159905	67154191	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67154960_67155095_67155295_67155376_67155655_67156509_67156669_67159837
H1_mix_00032701	chr16	-	2831	3	FSM	ENSG00000196123.13	ENST00000561679.5	2824	3	0	-7	0	2	multi-exon	TRUE	canonical	3	79	junction_2	4.5	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGCCTTTGTCTACTC	5985	False	NA	0	True	ATTAAA	-19	NA	67179552	67175596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67176976_67178009_67178108_67178198
H1_mix_00032703	chr16	-	3531	8	FSM	ENSG00000196123.13	ENST00000290881.11	3550	8	26	-7	26	2	multi-exon	FALSE	canonical	3	14	junction_3	27.3585415532036	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGCCTTTGTCTACTC	6169	False	NA	0	True	ATTAAA	-19	NA	67184014	67175596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67176976_67178009_67178108_67178198_67178505_67179429_67179563_67179814_67179959_67180040_67180667_67181605_67181698_67183261
H1_mix_00032706	chr16	-	1504	7	FSM	ENSG00000125122.17	ENST00000637247.1	1468	7	-30	-6	29	5	multi-exon	FALSE	canonical	1	1	junction_2	3.44802681092953	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTTAAGTTCTCAGACT	9799	False	NA	NA	False	ATTAAA	-20	NA	67226848	67207133	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67207505_67207598_67207774_67207872_67208091_67208311_67208456_67210047_67210323_67223825_67223928_67226629
H1_mix_00032711	chr16	-	1588	9	NNC	ENSG00000159720.13	novel	1636	8	NA	NA	0	48987	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	194.284866561964	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTAGCTCATCTGACTC	2467	False	NA	NA	False	NA	NA	NA	67481079	67389026	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_67389057_67438018_67438690_67438792_67438871_67438970_67439148_67439273_67439352_67443098_67443179_67444527_67444707_67453543_67453716_67480956
H1_mix_00032712	chr16	-	1667	9	NNC	ENSG00000159720.13	novel	1636	8	NA	NA	0	48987	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	194.284866561964	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTAGCTCATCTGACTC	-4	True	NA	NA	False	NA	NA	NA	67481157	67389026	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_67389058_67438018_67438690_67438792_67438871_67438970_67439148_67439273_67439352_67443098_67443179_67444527_67444707_67453543_67453716_67480956
H1_mix_00032713	chr16	-	1196	5	FSM	ENSG00000159714.12	ENST00000566075.1	1189	5	0	-7	0	1	multi-exon	FALSE	canonical	1	3	junction_4	11.146748404804	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGCGCTTACTTTCTTAAT	58	False	NA	0	True	AATAAA	-22	NA	67396257	67394417	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67394894_67395001_67395063_67395186_67395281_67395483_67395567_67395775
H1_mix_00032715	chr16	-	1986	12	FSM	ENSG00000159714.12	ENST00000565726.3	2252	12	0	266	0	1	multi-exon	FALSE	canonical	3	14	junction_7	6.87311206234029	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGCGCTTACTTTCTTAAT	-15	True	NA	0	True	AATAAA	-22	NA	67416477	67394417	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67394894_67395001_67395063_67395186_67395281_67395483_67395567_67398211_67398325_67398572_67398732_67398819_67398945_67399354_67399457_67400956_67401133_67406199_67406443_67407766_67407814_67416170
H1_mix_00032716	chr16	-	1712	8	FSM	ENSG00000159720.13	ENST00000290949.8	1636	8	9	-85	0	80	multi-exon	FALSE	canonical	3	507	junction_6	36.284026957394	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTCCACCTCCCTCCCT	5	True	NA	80	True	NA	NA	NA	67481148	67437933	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67438690_67438792_67438871_67438970_67439148_67439273_67439352_67443098_67443179_67444527_67444707_67453543_67453716_67480956
H1_mix_00032717	chr16	-	905	6	FSM	ENSG00000159720.13	ENST00000565835.5	905	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	236.431469986548	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACCAAGGATGGACGAAGA	2467	False	NA	NA	False	GGGGCT	-13	NA	67481079	67438320	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67438690_67438792_67438871_67438970_67439148_67439273_67439352_67443098_67443179_67480956
H1_mix_00032718	chr16	-	768	6	FSM	ENSG00000159720.13	ENST00000561852.5	768	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	235.209183494182	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTTGAGCACGAGGTGA	5	True	NA	NA	False	NA	NA	NA	67481148	67438808	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67438871_67438970_67439148_67439273_67439352_67443098_67443179_67444527_67444707_67480956
H1_mix_00032723	chr16	-	2047	12	FSM	ENSG00000102977.17	ENST00000219251.13	2052	12	3	2	3	-1	multi-exon	TRUE	canonical	3	17	junction_11	119.405206359627	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGGGGCCGCCGCCTCTT	6600	False	NA	-7	True	AATAAA	-35	NA	67660807	67657513	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67657685_67657761_67657854_67657985_67658363_67658554_67658642_67658719_67658817_67658927_67659080_67659228_67659264_67659374_67659420_67659536_67659614_67659701_67659796_67659902_67660037_67660121
H1_mix_00032724	chr16	-	2056	12	FSM	ENSG00000102977.17	ENST00000620338.4	2065	12	8	1	3	-1	multi-exon	FALSE	canonical	3	349	junction_1	35.5358043166291	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGGGGCCGCCGCCTCTT	6600	False	NA	-7	True	AATAAA	-35	NA	67660807	67657513	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67657685_67657761_67657854_67657985_67658363_67658554_67658642_67658719_67658817_67658927_67659080_67659228_67659264_67659374_67659420_67659536_67659614_67659701_67659796_67659902_67660046_67660121
H1_mix_00032725	chr16	-	1858	9	FSM	ENSG00000102977.17	ENST00000602860.5	1858	9	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_1	40.8516753022443	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTTTTTTAATAAAATAAT	10	True	NA	-56	True	NA	NA	NA	67660281	67657562	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67657685_67657761_67657854_67657985_67658363_67658554_67658642_67658719_67658817_67658927_67659614_67659701_67659796_67659902_67660046_67660121
H1_mix_00032729	chr16	-	3045	1	FSM	ENSG00000141098.13	ENST00000602522.1	2951	1	-95	1	-95	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATGGCATGTGGTTTTTG	NA	False	NA	-6	True	AATAAA	-16	NA	67677579	67674534	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67674500_67677600
H1_mix_00032730	chr16	-	2021	3	FSM	ENSG00000141098.13	ENST00000268797.12	2018	3	0	-3	0	1	multi-exon	FALSE	canonical	3	86	junction_1	7.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCATGTGGTTTTTGTT	18	True	NA	-4	True	AATAAA	-18	NA	67719316	67674532	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67676054_67685456_67685803_67719162
H1_mix_00032731	chr16	-	5491	2	FSM	ENSG00000141098.13	ENST00000602279.2	5507	2	0	16	0	-16	multi-exon	FALSE	canonical	3	101	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGATAAAACAACTCCTC	34	False	NA	NA	False	AATAAA	-7	NA	67719300	67680449	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67685803_67719162
H1_mix_00032738	chr16	-	1856	13	NIC	ENSG00000102901.13	novel	2580	16	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	19	junction_11	130.048148134963	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGCATTTTGGTGCAT	17	True	NA	0	True	AATAAA	-16	NA	67833880	67828156	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_67828391_67828473_67828579_67828666_67828844_67829422_67829517_67829764_67830089_67830389_67830549_67831215_67831359_67831575_67831613_67831753_67831891_67832011_67832109_67832227_67832355_67832454_67832546_67833749
H1_mix_00032740	chr16	-	2135	12	FSM	ENSG00000102901.13	ENST00000565157.5	2133	12	0	-2	0	0	multi-exon	FALSE	canonical	3	267	junction_5	52.560708701211	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGCATTTTGGTGCAT	0	True	NA	0	True	AATAAA	-16	NA	67833897	67828156	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67828391_67828473_67828579_67828666_67828844_67829422_67829517_67829764_67830549_67831215_67831359_67831575_67831613_67831753_67831891_67832011_67832109_67832227_67832316_67832454_67832546_67833749
H1_mix_00032741	chr16	-	1992	11	FSM	ENSG00000102901.13	ENST00000436104.6	1990	11	0	-2	0	0	multi-exon	FALSE	canonical	3	9	junction_6	160.426805740188	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGCATTTTGGTGCAT	0	True	NA	0	True	AATAAA	-16	NA	67833897	67828156	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67828391_67828473_67828560_67828666_67828844_67829422_67829517_67829764_67830549_67831215_67831359_67831840_67831891_67832011_67832109_67832227_67832316_67832454_67832546_67833749
H1_mix_00032742	chr16	-	2957	10	FSM	ENSG00000102901.13	ENST00000569862.5	2957	10	0	0	0	0	multi-exon	FALSE	canonical	3	366	junction_4	30.8776958137331	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGCATTTTGGTGCAT	-16	True	NA	0	True	AATAAA	-16	NA	67833913	67828156	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67828391_67828473_67828579_67828666_67828844_67829422_67829517_67829764_67831359_67831575_67831613_67831753_67831891_67832011_67832109_67832227_67832546_67833749
H1_mix_00032751	chr16	-	3060	6	ISM	ENSG00000141086.18	ENST00000574481.6	1165	7	-1620	324	-1117	0	intron_retention	FALSE	canonical	3	19	junction_5	12.2212928939618	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCAGGCCCTGTCCCATC	6935	False	NA	-24	True	ATTAAA	-1	NA	67933482	67929897	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_67930096_67930184_67930319_67930407_67930589_67930725_67930808_67930919_67931000_67931097
H1_mix_00032752	chr16	-	583	4	FSM	ENSG00000205220.12	ENST00000570985.1	591	4	8	0	8	0	multi-exon	FALSE	canonical	3	516	junction_3	42.4604391038163	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATGGCTGTGTCATTCTT	-7	True	NA	-4	True	AATAAA	-20	NA	67935787	67934505	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67934672_67934796_67934949_67935419_67935479_67935581
H1_mix_00032753	chr16	-	977	8	FSM	ENSG00000205220.12	ENST00000358514.9	977	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	269.826853022906	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATGGCTGTGTCATTCTT	-13	True	NA	-4	True	AATAAA	-20	NA	67936850	67934505	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67934672_67934796_67934949_67935419_67935479_67935581_67935698_67935962_67936104_67936214_67936313_67936397_67936486_67936693
H1_mix_00032755	chr16	-	6139	28	NIC	ENSG00000124067.17	novel	4708	24	NA	NA	0	3592	intron_retention	TRUE	canonical	3	25	junction_1	56.5222560775733	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGATGGCTATGTTTCA	6	True	NA	0	True	AATAAA	-22	NA	67968616	67939881	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_67940479_67942362_67942588_67942670_67942767_67942860_67942977_67943055_67944932_67945086_67945221_67945368_67945554_67945763_67945872_67945950_67946083_67946170_67946341_67946437_67946634_67946936_67947106_67947330_67947436_67947668_67947789_67948060_67948160_67949799_67949919_67950318_67950494_67950653_67950712_67950961_67951061_67951139_67951305_67951822_67952038_67952183_67952426_67954642_67954774_67957741_67957797_67957897_67958045_67961574_67961707_67963464_67963560_67968438
H1_mix_00032756	chr16	-	6033	27	NIC	ENSG00000124067.17	novel	4708	24	NA	NA	0	1665	intron_retention	FALSE	canonical	3	36	junction_1	50.3344582995356	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTTTCCCCCTTTCTGG	1070	False	NA	-7	True	AATAAA	-17	NA	67968553	67941808	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_67942588_67942670_67942767_67942860_67942977_67943055_67944932_67945086_67945221_67945368_67945554_67945763_67945872_67945950_67946083_67946170_67946341_67946437_67946634_67946936_67947106_67947330_67947436_67947668_67947789_67948060_67948160_67949799_67949919_67950318_67950494_67950653_67950712_67950961_67951061_67951139_67951305_67951822_67952038_67952183_67952426_67954642_67954774_67957741_67957797_67957897_67958045_67961574_67961707_67963464_67963560_67968438
H1_mix_00032757	chr16	-	5744	28	Fusion	ENSG00000213398.8_ENSG00000124067.17	novel	4708	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	11	junction_1	57.8537487240595	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTTTCCCCCTTTCTGG	1039	False	NA	-7	True	AATAAA	-17	NA	67968584	67941808	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr16_-_67942043_67942362_67942588_67942670_67942767_67942860_67942977_67943055_67944932_67945086_67945221_67945368_67945554_67945763_67945872_67945950_67946083_67946170_67946341_67946437_67946634_67946936_67947106_67947330_67947436_67947668_67947789_67948060_67948160_67949799_67949919_67950318_67950494_67950653_67950712_67950961_67951061_67951139_67951305_67951822_67952038_67952183_67952426_67954642_67954774_67957741_67957797_67957897_67958045_67961574_67961707_67963464_67963560_67968438
H1_mix_00032761	chr16	-	3764	23	FSM	ENSG00000124067.17	ENST00000570802.5	3761	23	0	-3	0	0	multi-exon	FALSE	canonical	3	155	junction_11	17.6623519862432	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGAAGGGTAGCCAGGGA	1070	False	NA	NA	False	NA	NA	NA	67968553	67944481	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67944932_67945086_67945554_67945763_67945872_67945950_67946083_67946170_67946341_67946437_67946634_67946936_67947106_67947330_67947436_67947668_67947789_67948060_67948160_67949799_67949919_67950318_67950494_67950653_67950712_67950961_67951061_67951139_67951305_67951822_67952038_67952183_67952426_67954642_67954774_67957741_67957797_67957897_67958045_67961574_67961707_67963464_67963560_67968438
H1_mix_00032764	chr16	-	685	5	FSM	ENSG00000124067.17	ENST00000576462.1	673	5	0	-12	0	12	multi-exon	FALSE	canonical	3	180	junction_2	14.972892172189	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGGCAATGTATGTTTAC	1154	False	NA	NA	False	TATAAA	-23	NA	67968469	67957516	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67957797_67957897_67958045_67961574_67961707_67963464_67963560_67968438
H1_mix_00032765	chr16	-	1737	10	FSM	ENSG00000141096.6	ENST00000672962.1	1737	10	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	10.3076143496081	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGGTGCACATGTCCTT	NA	False	NA	-12	True	AATAAA	-15	NA	67980549	67975663	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67976002_67976092_67976229_67976699_67976776_67977269_67977355_67977652_67977830_67977937_67978008_67978266_67978409_67978496_67978627_67979638_67979766_67980093
H1_mix_00032766	chr16	-	2700	1	FSM	ENSG00000182810.7	ENST00000332395.7	2317	1	7	-390	7	390	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATGCCAGCACTTTGGG	-3	True	NA	NA	False	AAAAAG	-22	NA	68023225	68020525	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_68020500_68023200
H1_mix_00032767	chr16	-	3178	1	FSM	ENSG00000262160.1	ENST00000571197.1	3177	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	241	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGTGATGTGGGGGTGA	8403	False	NA	-66	True	AATAAA	-19	NA	68229145	68225967	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_68226000_68229100
H1_mix_00032774	chr16	-	4191	5	FSM	ENSG00000103061.13	ENST00000263997.11	4191	5	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_2	5.59016994374947	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTGCAGGTAAGACTCAA	-5	True	NA	NA	False	AGTAAA	-18	NA	68310946	68298033	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_68301406_68302380_68302502_68304025_68304233_68310334_68310614_68310734
H1_mix_00032775	chr16	-	1078	3	FSM	ENSG00000103061.13	ENST00000568538.2	910	3	-124	-44	0	44	multi-exon	FALSE	canonical	3	111	junction_2	1	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAGAAACCTCGGATGAAG	-5	True	NA	NA	False	NA	NA	NA	68310946	68303645	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_68304233_68310334_68310614_68310734
H1_mix_00032776	chr16	-	284	1	FSM	ENSG00000279693.1	ENST00000624251.1	2938	1	1223	1431	1223	-1431	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGCTTCCATTTCTGCCC	3241	False	NA	NA	False	NA	NA	NA	68369039	68368755	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_68368800_68369000
H1_mix_00032779	chr16	-	2687	2	ISM	ENSG00000286140.2	ENST00000306585.9	2761	3	10670	-1	10670	1	3prime_fragment	FALSE	canonical	3	338	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGTCACTGTGTTTTG	NA	False	NA	-9	True	AATAAA	-16	NA	69121481	69118008	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_69120650_69121435
H1_mix_00032780	chr16	-	2922	4	FSM	ENSG00000168802.14	ENST00000448552.7	2921	4	0	-1	0	1	multi-exon	FALSE	canonical	3	433	junction_2	72.8941393772885	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGTCACTGTGTTTTG	-12	True	NA	-9	True	AATAAA	-16	NA	69132588	69118008	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_69120650_69121052_69121171_69121435_69121494_69132483
H1_mix_00032782	chr16	-	2811	4	FSM	ENSG00000168802.14	ENST00000398235.6	1073	4	-61	-1677	-61	0	multi-exon	FALSE	canonical	3	225	junction_3	139.207279503145	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGGTGGGGGATGAAGGG	468	False	NA	-91	True	TTTAAA	-31	NA	69132207	69118133	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_69120650_69121052_69121171_69121435_69121494_69132088
H1_mix_00032787	chr16	-	2859	2	FSM	ENSG00000258429.2	ENST00000288022.2	2859	2	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCAGTAAAATCTCTCCC	0	True	NA	NA	False	AATAAA	-18	NA	69330588	69326912	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_69329180_69329996
H1_mix_00032788	chr16	-	1743	4	FSM	ENSG00000213380.16	ENST00000562081.2	1731	4	0	-12	0	12	multi-exon	FALSE	canonical	3	290	junction_1	19.3275853524323	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATCCTTCATGCACGT	333	False	NA	1	True	AGTAAA	-36	NA	69339583	69332583	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_69332883_69334520_69335349_69336504_69336713_69339175
H1_mix_00032791	chr16	-	3184	7	ISM	ENSG00000132604.11	ENST00000254942.8	2996	10	32	9400	13	0	5prime_fragment	FALSE	canonical	3	189	junction_1	23.392781412697	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACACCCATCATCAATGT	21	True	NA	-20	True	AATAAA	-17	NA	69385975	69364966	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_69367200_69368375_69368483_69370482_69370630_69372268_69372356_69384579_69384711_69385390_69385487_69385592
H1_mix_00032794	chr16	-	2522	5	FSM	ENSG00000181019.13	ENST00000379047.7	2527	5	0	5	0	-5	multi-exon	FALSE	canonical	3	40	junction_1	163.226070221641	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACACTCATTGGTATCAGT	NA	False	NA	-8	True	AATAAA	-21	NA	69726668	69709405	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_69711282_69714963_69715078_69718122_69718254_69718369_69718535_69726432
H1_mix_00032795	chr16	-	1105	5	FSM	ENSG00000181019.13	ENST00000379046.6	1105	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	158.62435973078	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTTCTTTAAAGGCA	NA	False	NA	NA	False	NA	NA	NA	69726584	69710726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_69711282_69713027_69713130_69718122_69718254_69718369_69718535_69726432
H1_mix_00032797	chr16	-	1716	9	FSM	ENSG00000141101.13	ENST00000268802.10	1716	9	0	0	0	0	multi-exon	TRUE	canonical	3	444	junction_4	26.219029348929	254	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTCTTTTCTTTTAAC	2	True	NA	-25	True	AATAAA	-15	NA	69754926	69741870	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_69742602_69744872_69745018_69748231_69748330_69748917_69749119_69749212_69749339_69749558_69749631_69752240_69752372_69754593_69754727_69754847
H1_mix_00032799	chr16	-	2575	1	FSM	ENSG00000260290.2	ENST00000566277.2	1402	1	-48	-1125	-48	1125	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTACCTATCTCATAGGG	86	False	NA	NA	False	ATTAAA	-26	NA	69757985	69755410	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_69755400_69758000
H1_mix_00032800	chr16	-	6144	2	ISM	ENSG00000226232.8	ENST00000525562.5	1212	6	7935	-1568	316	491	3prime_fragment	FALSE	canonical	3	108	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATTTCTATCTTCTTCC	NA	False	NA	NA	False	GATAAA	-24	NA	69982149	69975896	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_69978113_69978221
H1_mix_00032801	chr16	-	2764	25	FSM	ENSG00000196696.13	ENST00000530079.5	2764	25	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_7	106.511923889091	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCCACACTCCAAAAACAAA	105	False	NA	NA	False	AAGAAA	-44	NA	70065853	69976351	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_69976733_69978076_69978113_69978221_69978283_69982349_69982495_69982657_69982758_69986380_69986510_69990596_69990684_69996068_69996227_69996389_69996469_70010750_70010857_70011840_70011930_70014103_70014168_70018046_70018098_70021823_70021950_70023378_70023478_70023629_70023679_70024585_70024671_70030987_70031067_70031899_70031969_70034170_70034361_70036431_70036579_70038904_70039101_70042350_70042417_70042929_70043004_70065755
H1_mix_00032805	chr16	-	1580	18	FSM	ENSG00000196696.13	ENST00000529089.1	1580	18	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_15	119.705289780294	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCACAGTTCCTGTCCCAT	140	False	NA	NA	False	NA	NA	NA	70065818	69996163	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_69996227_69996389_69996469_70010750_70010857_70011840_70011930_70014103_70014168_70018046_70018098_70021823_70021950_70023378_70023478_70023629_70023679_70024585_70024671_70030987_70031067_70031899_70031969_70034170_70034361_70036431_70036579_70038904_70038986_70042350_70042417_70042929_70043004_70065755
H1_mix_00032806	chr16	-	5476	23	Fusion	ENSG00000090861.17_ENSG00000223496.3	novel	3437	21	NA	NA	0	59373	multi-exon	FALSE	non_canonical	0	0	junction_1	368.994739486344	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAAAAAT	-7	True	NA	NA	False	NA	NA	NA	70289506	70187404	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr16_-_70187432_70246784_70248796_70252296_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258032_70258218_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289420
H1_mix_00032807	chr16	-	629	3	FSM	ENSG00000261556.10	ENST00000573141.6	619	3	0	-10	0	10	multi-exon	FALSE	canonical	3	34	junction_2	4	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGCTTCTCTTGCTCA	NA	False	NA	NA	False	ACTAAA	-39	NA	70221294	70219563	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_70219992_70220720_70220881_70221253
H1_mix_00032809	chr16	-	5163	1	FSM	ENSG00000223496.3	ENST00000435634.3	5163	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGTTCTTTTATTTTCCT	-4	True	NA	0	True	AATAAA	-22	NA	70251940	70246777	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_70246800_70251900
H1_mix_00032810	chr16	-	3717	21	FSM	ENSG00000090861.17	ENST00000674963.1	3717	21	0	0	0	0	multi-exon	FALSE	canonical	2	47	junction_20	285.914829975642	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCGCGCGTCTTTAAACAA	NA	False	NA	NA	False	NA	NA	NA	70289580	70251982	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258032_70258218_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289529
H1_mix_00032811	chr16	-	3897	20	FSM	ENSG00000090861.17	ENST00000675917.1	3897	20	0	0	0	0	multi-exon	FALSE	canonical	2	72	junction_19	286.932298712294	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCGCTGTAGTGCCTCCC	9	False	NA	NA	False	NA	NA	NA	70279340	70252027	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258032_70258218_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70278899
H1_mix_00032813	chr16	-	3303	20	FSM	ENSG00000090861.17	ENST00000676168.1	3296	20	0	-7	0	0	multi-exon	FALSE	canonical	2	86	junction_6	284.929043020866	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTGCTGTGGTGTTCAC	-18	True	NA	-24	True	AATAAA	-15	NA	70289557	70252297	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289420
H1_mix_00032814	chr16	-	6014	19	FSM	ENSG00000090861.17	ENST00000674962.1	6004	19	2	-12	0	0	multi-exon	FALSE	canonical	3	1075	junction_9	122.300290723739	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTGCTGTGGTGTTCAC	-16	True	NA	-24	True	AATAAA	-15	NA	70289555	70252297	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_70252907_70253267_70253801_70253918_70254039_70254620_70254735_70255727_70258218_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289420
H1_mix_00032815	chr16	-	3633	19	FSM	ENSG00000090861.17	ENST00000675371.1	3623	19	2	-12	0	0	multi-exon	FALSE	canonical	3	86	junction_5	287.322467999431	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTGCTGTGGTGTTCAC	-16	True	NA	-24	True	AATAAA	-15	NA	70289555	70252297	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_70252907_70253267_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289420
H1_mix_00032816	chr16	-	3778	20	FSM	ENSG00000090861.17	ENST00000676247.1	3790	20	24	-12	0	0	multi-exon	FALSE	canonical	3	43	junction_9	289.9969719968	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTGCTGTGGTGTTCAC	-16	True	NA	-24	True	AATAAA	-15	NA	70289555	70252297	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_70252907_70253267_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258032_70258218_70258979_70259187_70261043_70261158_70262345_70262485_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289420
H1_mix_00032818	chr16	-	7920	7	FSM	ENSG00000157350.13	ENST00000342907.3	7920	7	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_3	15.1520075677559	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAGTACACTTAGGCCG	-18	True	NA	-10	True	AATAAA	-16	NA	70439100	70375976	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_70381863_70382804_70382925_70383189_70383236_70388366_70388547_70394981_70395176_70398191_70399534_70438948
H1_mix_00032819	chr16	-	4769	8	NIC	ENSG00000157350.13	novel	7920	7	NA	NA	13	2060	combination_of_known_junctions	FALSE	canonical	3	17	junction_7	82.6134346933762	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTCTAGTCCTTCATTG	-5	True	NA	-20	True	ATTAAA	-11	NA	70439087	70379513	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_70381863_70382804_70382925_70383189_70383236_70388366_70388547_70394981_70395176_70398191_70399534_70400695_70401095_70438948
H1_mix_00032823	chr16	-	970	3	Antisense	novelGene_ENSG00000157368.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	41	junction_1	3	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACGGTCATAGAAAAATACA	NA	False	NA	2	True	AATAAA	-31	NA	70621704	70616487	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr16_-_70617059_70619646_70619806_70621464
H1_mix_00032824	chr16	-	908	3	Antisense	novelGene_ENSG00000157368.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	32	junction_2	12	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGACTACATTGAGTCAC	NA	False	NA	71	True	ATTAAA	-23	NA	70621763	70616418	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr16_-_70616926_70619646_70619749_70621464
H1_mix_00032825	chr16	-	518	6	FSM	ENSG00000132613.16	ENST00000576338.1	518	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	2.31516738055805	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGTCCTACCAGACCCC	7658	False	NA	NA	False	NA	NA	NA	70680025	70676948	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_70676979_70677791_70677900_70678251_70678410_70679629_70679705_70679785_70679878_70679970
H1_mix_00032826	chr16	-	3614	1	FSM	ENSG00000103043.15	ENST00000571759.1	3609	1	0	-5	0	3	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCGGCCTGCTCCTTCCC	7865	False	NA	2	True	AATAAA	-25	NA	70691049	70687435	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_70687400_70691000
H1_mix_00032827	chr16	-	3081	19	NNC	ENSG00000103043.15	novel	3096	19	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	83.9498858446712	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGAGCCGGCCTGCTCCTT	8	True	NA	-1	True	AATAAA	-22	NA	70801146	70687438	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_70688091_70692820_70692972_70695543_70695624_70697138_70697258_70698636_70698812_70731494_70731628_70744422_70744580_70762539_70762606_70762880_70763026_70772108_70772173_70780792_70780940_70781868_70782004_70783032_70783140_70783444_70783555_70784112_70784221_70784775_70784839_70785701_70785870_70786214_70786366_70800796
H1_mix_00032831	chr16	-	4875	3	FSM	ENSG00000180917.18	ENST00000434935.7	4875	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	11	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTCCTTTGTAATCTGT	-1	True	NA	NA	False	ATTAAA	-15	NA	71289402	71281391	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_71285940_71288877_71288938_71289135
H1_mix_00032833	chr16	-	2772	2	FSM	ENSG00000180917.18	ENST00000564690.1	2772	2	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAACGAAAA	-28	True	NA	NA	False	NA	NA	NA	71289429	71286459	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_71288938_71289135
H1_mix_00032836	chr16	-	2712	5	FSM	ENSG00000167377.19	ENST00000358700.7	2690	5	0	-22	0	0	multi-exon	FALSE	canonical	0	0	junction_1	24.3246274380513	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATGAGTACATTTTTAAT	5405	False	NA	5	True	AATAAA	-23	NA	71456828	71447596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_71449883_71450589_71450716_71453242_71453351_71454041_71454169_71456763
H1_mix_00032837	chr16	-	3242	6	FSM	ENSG00000167377.19	ENST00000393539.6	3242	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	21.8814990345726	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATGAGTACATTTTTAAT	19	True	NA	5	True	AATAAA	-23	NA	71462214	71447596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_71449883_71453242_71453351_71454041_71454219_71456071_71456122_71456763_71456829_71461658
H1_mix_00032838	chr16	-	2750	5	FSM	ENSG00000167377.19	ENST00000357254.8	3186	5	436	0	69	0	multi-exon	FALSE	canonical	2	4	junction_1	21.6794833886788	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATGAGTACATTTTTAAT	NA	False	NA	5	True	AATAAA	-23	NA	71462323	71447596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_71449883_71453242_71453351_71454041_71454219_71456763_71456829_71462209
H1_mix_00032839	chr16	-	3161	5	NIC	ENSG00000167377.19	novel	2627	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	14	junction_3	19.4084388862165	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATTTATTTAAAAAAGGAAA	-19	True	NA	-17	True	AATAAA	-1	NA	71462252	71447618	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_71449886_71453242_71453351_71454041_71454169_71456763_71456829_71461658
H1_mix_00032842	chr16	-	915	1	FSM	ENSG00000157429.16	ENST00000617615.1	1286	1	121	250	121	-250	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTTGGAAAAGAACTGAAT	9763	False	NA	NA	False	NA	NA	NA	71564817	71563902	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_71563900_71564800
H1_mix_00032844	chr16	-	7984	19	FSM	ENSG00000040199.18	ENST00000567016.1	4812	19	70	-3242	0	0	multi-exon	FALSE	canonical	2	19	junction_17	6.37050495120546	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGAGTGCTTGTTATT	5617	False	NA	-4	True	AATAAA	-37	NA	71723812	71644927	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_71650045_71652789_71653022_71655239_71655435_71656570_71656682_71658232_71658364_71658652_71658816_71663898_71664100_71667177_71667334_71669274_71669371_71672261_71672323_71676446_71676650_71678754_71678986_71679388_71679536_71681750_71681906_71684475_71684602_71690518_71690710_71702597_71702732_71714511_71714802_71723768
H1_mix_00032848	chr16	-	6982	24	FSM	ENSG00000166747.13	ENST00000393512.7	3593	24	-4	-3385	-4	0	multi-exon	FALSE	canonical	0	0	junction_18	43.9945433976904	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTCCTTGCTTCTTAC	NA	False	NA	0	True	AATAAA	-25	NA	71809205	71728999	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_71733160_71734608_71734708_71738941_71739103_71739233_71739342_71745143_71745271_71745472_71745615_71746587_71746693_71748250_71748379_71749893_71749984_71750209_71750333_71753832_71753888_71756018_71756160_71758807_71758922_71761511_71761568_71764349_71764449_71764645_71764727_71765488_71765585_71767876_71767886_71769622_71769700_71771155_71771253_71773220_71773363_71774467_71774593_71789278_71789483_71808762
H1_mix_00032850	chr16	-	1828	7	FSM	ENSG00000102984.15	ENST00000611294.4	1833	7	0	5	0	0	multi-exon	FALSE	canonical	1	10	junction_2	19.8494332412792	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCCCTTTCTTGCTTTTC	-26	True	NA	-10	True	AATAAA	-16	NA	71884190	71859684	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_71860673_71864137_71864243_71864902_71865049_71867911_71868038_71879906_71880024_71883210_71883274_71883907
H1_mix_00032854	chr16	-	691	1	FSM	ENSG00000263232.2	ENST00000573189.2	1507	1	-96	912	-96	-912	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCGAAAGAGATCCACTGTT	7302	False	NA	NA	False	AAGAAA	-34	NA	72006639	72005948	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_72005900_72006600
H1_mix_00032857	chr16	-	891	4	NNC	ENSG00000140830.9	novel	2521	4	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	30.6521704868604	224	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACTGTTAGTTGGGTTTT	5	True	NA	-4	True	AATAAA	-17	NA	72093617	72084856	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_72085176_72088986_72089139_72090617_72090787_72093366
H1_mix_00032858	chr16	-	438	7	FSM	ENSG00000261008.8	ENST00000655530.1	436	7	0	-2	0	0	multi-exon	FALSE	canonical	2	2	junction_1	7.55902698029904	450	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGTATCTCACGTTGCAT	-3	True	NA	NA	False	AATAAA	-29	NA	72664977	72521005	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_72521042_72522552_72522624_72523331_72523416_72540577_72540612_72555264_72555327_72570450_72570516_72664891
H1_mix_00032860	chr16	-	3204	1	FSM	ENSG00000259972.3	ENST00000621548.1	2032	1	-1172	0	-85	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTACTTTTTCTCCTT	NA	False	NA	-32	True	ATTAAA	-16	NA	74308942	74305738	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_74305700_74308900
H1_mix_00032863	chr16	-	9466	26	FSM	ENSG00000090863.12	ENST00000422840.7	9287	26	16	-195	0	182	multi-exon	FALSE	canonical	3	595	junction_8	41.4976818629668	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTATGCTGCTAGTAGCA	8	True	NA	NA	False	NA	NA	NA	74607098	74447244	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_74453335_74456648_74456756_74457873_74457995_74459681_74459790_74462093_74462196_74462487_74462631_74463355_74463480_74465675_74465814_74467755_74467849_74468945_74469064_74469984_74470074_74471172_74471287_74472348_74472412_74474545_74474633_74477395_74477534_74480240_74480395_74483022_74483125_74485795_74485918_74491000_74491216_74492956_74493141_74494759_74494832_74496440_74496645_74503530_74503747_74508838_74508926_74532120_74532154_74606656
H1_mix_00032870	chr16	-	841	3	FSM	ENSG00000168411.14	ENST00000575397.5	841	3	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_2	19	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACTTCACAAAGTAATGAA	45	False	NA	NA	False	AATAAA	-11	NA	74666832	74660779	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_74661452_74664623_74664746_74666785
H1_mix_00032874	chr16	-	1953	17	FSM	ENSG00000103091.15	ENST00000616369.4	1953	17	0	0	0	0	multi-exon	TRUE	canonical	3	126	junction_2	29.7363414023985	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCTGTATGGTTATTA	30	True	NA	0	True	ATTAAA	-18	NA	74985083	74908732	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_74908978_74909500_74909658_74909821_74909918_74912197_74912363_74915869_74915995_74916126_74916260_74917928_74918009_74921946_74922104_74923925_74924004_74938149_74938267_74942737_74942827_74948518_74948557_74949717_74949799_74951457_74951544_74956474_74956611_74965772_74965823_74984963
H1_mix_00032876	chr16	-	1639	14	ISM	ENSG00000103091.15	ENST00000616369.4	1953	17	0	3281	0	-9	5prime_fragment	FALSE	canonical	3	184	junction_2	14.4201535498887	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTAACCTTTTTTGGGTC	30	True	NA	94	True	AAAACA	-13	NA	74985083	74912013	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_74912363_74915869_74915995_74916126_74916260_74917928_74918009_74921946_74922104_74923925_74924004_74938149_74938267_74942737_74942827_74948518_74948557_74949717_74949799_74951457_74951544_74956474_74956611_74965772_74965823_74984963
H1_mix_00032878	chr16	-	2011	11	FSM	ENSG00000166816.15	ENST00000450168.3	2007	11	0	-4	0	0	multi-exon	FALSE	canonical	3	59	junction_6	16.0374561573836	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGAAGTCAGCAGGCAGC	4	True	NA	-5	True	AATAAA	-33	NA	75116780	75111859	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_75112522_75112601_75112714_75112833_75112925_75113534_75113663_75113741_75113871_75113965_75114166_75114525_75114686_75114826_75114969_75115197_75115340_75115547_75115661_75116648
H1_mix_00032880	chr16	-	3349	8	NNC	ENSG00000050820.17	novel	4085	7	NA	NA	-88	90156	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	214.457930796771	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTGGGAGGTTATGTCA	160	False	NA	NA	False	NA	NA	NA	75251712	75138024	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_75138055_75229034_75230024_75233845_75233936_75234888_75235987_75236881_75236999_75237182_75237345_75242469_75243091_75251470
H1_mix_00032888	chr16	-	479	2	FSM	ENSG00000261783.1	ENST00000561956.1	374	2	-17	-88	-17	88	multi-exon	FALSE	canonical	3	11	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCTTATAATATTACAACT	NA	False	NA	66	True	NA	NA	NA	75381277	75379729	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_75380135_75381203
H1_mix_00032892	chr16	-	2331	3	FSM	ENSG00000166822.13	ENST00000569540.5	2331	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	46	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	14	True	NA	6	True	NA	NA	NA	75464416	75445713	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_75447689_75451668_75451840_75464231
H1_mix_00032894	chr16	-	8370	3	FSM	ENSG00000183196.10	ENST00000332272.9	8370	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCCAGTACTTTAGTAGT	-4	True	NA	-11	True	GATAAA	-17	NA	75495441	75472051	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_75479845_75481816_75481892_75494939
H1_mix_00032895	chr16	-	1708	3	NIC	ENSG00000183196.10	novel	2000	4	NA	NA	143	-9	combination_of_known_splicesites	FALSE	canonical	2	15	junction_1	9	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACGCTTGCTTCCAGTAC	272	False	NA	-20	True	GATAAA	-8	NA	75495165	75472060	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_75473468_75481816_75481892_75494939
H1_mix_00032897	chr16	-	5443	6	NIC	ENSG00000205084.12	novel	4247	7	NA	NA	0	35	combination_of_known_junctions	FALSE	canonical	3	60	junction_4	8.68562030024339	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTATGACCATTGTTAA	8	True	NA	33	True	NA	NA	NA	75556238	75536705	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_75541456_75542601_75542684_75545351_75545496_75545825_75545955_75555803_75555974_75556070
H1_mix_00032899	chr16	-	2935	6	FSM	ENSG00000205084.12	ENST00000568377.5	2920	6	0	-15	0	0	multi-exon	FALSE	canonical	3	60	junction_5	9.78979060041633	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAGTCAAAATGGAAG	8	True	NA	-23	True	AATAAA	-13	NA	75556238	75538135	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_75540175_75541349_75541456_75542601_75542684_75545351_75545496_75545825_75545955_75555803
H1_mix_00032900	chr16	-	2991	7	FSM	ENSG00000205084.12	ENST00000562410.5	2991	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	24.8109518828547	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAGTCAAAATGGAAG	-22	True	NA	-23	True	AATAAA	-13	NA	75556268	75538135	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_75540175_75541349_75541456_75542601_75542684_75545351_75545496_75545825_75546078_75555803_75555974_75556070
H1_mix_00032904	chr16	-	5763	10	FSM	ENSG00000065457.11	ENST00000564657.2	5757	10	0	-6	0	6	multi-exon	FALSE	canonical	3	73	junction_2	9.11652955411823	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGTTTATCCAGTCAT	-6	True	NA	-20	True	AATAAA	-22	NA	75623281	75596861	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_75600349_75603084_75603172_75608223_75608324_75608842_75608989_75612242_75612862_75617141_75617273_75618585_75618641_75620265_75620335_75620630_75620821_75622402
H1_mix_00032906	chr16	-	2770	11	FSM	ENSG00000065457.11	ENST00000307921.7	1869	11	25	-926	0	24	multi-exon	FALSE	canonical	3	33	junction_10	18.1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGCCAAAAGGCCCTGCA	0	True	NA	NA	False	NA	NA	NA	75623275	75599075	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_75600349_75603084_75603172_75608223_75608324_75608842_75608989_75612242_75612862_75617141_75617273_75618585_75618641_75620265_75620335_75620630_75620821_75622402_75622465_75623237
H1_mix_00032909	chr16	-	1991	14	FSM	ENSG00000065427.15	ENST00000302445.8	1991	14	0	0	0	0	multi-exon	FALSE	canonical	3	751	junction_13	107.518541128452	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATTTGTCTCTTCTCTTT	-7	True	NA	-49	True	ATTAAA	-30	NA	75647665	75627723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_75627994_75628568_75628713_75629414_75629542_75630422_75630509_75631167_75631254_75631415_75631590_75631692_75631856_75634172_75634293_75635679_75635806_75635911_75636099_75636453_75636548_75640183_75640350_75641563_75641724_75647577
H1_mix_00032910	chr16	-	1942	14	FSM	ENSG00000065427.15	ENST00000564578.5	1942	14	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_11	357.079707011983	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAGACAAGGAATTAAAAAT	10	True	NA	-95	True	NA	NA	NA	75647648	75627769	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_75627994_75628568_75628713_75629414_75629542_75630422_75630509_75631167_75631254_75631415_75631590_75631692_75631856_75634172_75634293_75635679_75635806_75635911_75636099_75636453_75636548_75641563_75641724_75644282_75644463_75647577
H1_mix_00032922	chr16	-	817	5	NIC	ENSG00000103121.9	novel	871	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	312	junction_2	419.682841560148	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTCTCCTTTCTCTTAG	-22	True	NA	-10	True	AATAAA	-15	NA	81006873	80975800	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_80976180_80980769_80980880_80981805_80981878_80997313_80997430_81006733
H1_mix_00032923	chr16	-	615	3	FSM	ENSG00000103121.9	ENST00000569187.5	612	3	0	-3	0	0	multi-exon	FALSE	canonical	3	46	junction_2	399	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTCTCCTTTCTCTTAG	233	False	NA	-10	True	AATAAA	-15	NA	81006897	80975800	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_80976180_80981805_80981878_81006733
H1_mix_00032925	chr16	-	927	7	FSM	ENSG00000103121.9	ENST00000567593.5	919	7	0	-8	0	0	multi-exon	FALSE	canonical	2	6	junction_4	138.838535316708	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGCAGGGCGTTTAGTAC	12	True	NA	NA	False	NA	NA	NA	81006839	80975927	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_80976180_80980769_80980880_80981805_80981878_80991753_80991958_80997313_80997430_80998284_80998352_81006733
H1_mix_00032934	chr16	-	1558	5	FSM	ENSG00000140905.11	ENST00000315467.9	1560	5	0	2	0	-2	multi-exon	FALSE	canonical	3	2157	junction_3	47.7879430400598	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAATGGACTCTGATAGTA	-8	True	NA	-8	True	AATAAA	-32	NA	81096395	81081946	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_81082964_81084462_81084595_81087600_81087665_81090600_81090681_81096130
H1_mix_00032935	chr16	-	975	4	FSM	ENSG00000140905.11	ENST00000564386.6	975	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	1041.94508279254	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTCGTTAATCATGTTT	122	False	NA	-20	True	AATAAA	-4	NA	81096265	81082335	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_81082964_81084462_81084595_81090600_81090681_81096130
H1_mix_00032937	chr16	-	403	3	FSM	ENSG00000140905.11	ENST00000561801.2	403	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	1115.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGTCTTAAATTAGTGG	130	False	NA	NA	False	AATAAA	-27	NA	81096257	81082819	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_81082964_81084462_81084595_81096130
H1_mix_00032940	chr16	-	2092	1	FSM	ENSG00000279021.1	ENST00000624764.1	968	1	-512	-612	-512	612	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTAAAGATCGGGGCCAGC	NA	False	NA	NA	False	NA	NA	NA	81465371	81463279	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_81463300_81465400
H1_mix_00032944	chr16	-	1101	5	FSM	ENSG00000135698.10	ENST00000258169.9	1101	5	0	0	0	0	multi-exon	FALSE	canonical	3	652	junction_2	17.5356779167502	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTATATTTTCTTGTAC	-20	True	NA	-8	True	AATAAA	-17	NA	82170224	82148161	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_82148864_82149308_82149404_82151423_82151515_82164081_82164195_82170124
H1_mix_00032945	chr16	-	432	5	FSM	ENSG00000135698.10	ENST00000568016.1	432	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	343.261835192903	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAAGCACAAAGCAGAAGAA	-11	True	NA	NA	False	NA	NA	NA	82170215	82149381	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_82149404_82151237_82151353_82151423_82151515_82164081_82164195_82170124
H1_mix_00032946	chr16	-	619	3	FSM	ENSG00000135698.10	ENST00000569599.5	619	3	0	0	0	0	multi-exon	FALSE	canonical	3	691	junction_2	3.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAACGGAAAAATGTTACT	5	True	NA	NA	False	NA	NA	NA	82170199	82151083	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_82151515_82164081_82164195_82170124
H1_mix_00032949	chr16	-	763	7	FSM	ENSG00000140943.18	ENST00000569770.5	763	7	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	103.283455704301	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGTCTTATGGCCTTGGT	2398	False	NA	NA	False	NA	NA	NA	84093286	84070714	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_84070777_84081746_84081909_84084982_84085135_84087357_84087461_84090874_84090943_84091731_84091849_84093187
H1_mix_00032954	chr16	-	3535	7	FSM	ENSG00000103160.12	ENST00000434463.7	1493	7	-19	-2023	4	41	multi-exon	FALSE	canonical	3	36	junction_3	113.710768570478	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTCTGGATCTCTTTCT	22	False	84145210	29	True	NA	NA	NA	84145188	84122099	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_84124729_84129547_84129776_84129985_84130172_84130336_84130432_84131101_84131328_84135543_84135606_84145079
H1_mix_00032955	chr16	-	538	3	FSM	ENSG00000103160.12	ENST00000567294.5	542	3	4	0	4	0	multi-exon	FALSE	canonical	3	308	junction_2	37	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCATTTTCTTACTGCT	22	False	84145210	3	True	AATAAA	-30	NA	84145188	84130960	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_84131328_84135543_84135606_84145079
H1_mix_00032958	chr16	-	3817	14	FSM	ENSG00000103168.17	ENST00000564208.5	3810	14	0	-7	0	0	multi-exon	FALSE	canonical	0	0	junction_8	113.33377421889	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACTATGATGCTTTCGG	-5	True	NA	-9	True	ATTAAA	-25	NA	84187052	84177846	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_84179852_84179945_84180084_84180169_84180345_84181042_84181187_84181327_84181664_84181745_84181864_84181941_84182059_84182201_84182441_84183075_84183150_84183243_84183334_84183409_84183508_84183696_84183779_84184850_84184900_84186900
H1_mix_00032959	chr16	-	3855	15	FSM	ENSG00000103168.17	ENST00000566732.6	3847	15	0	-8	0	0	multi-exon	FALSE	canonical	0	0	junction_9	97.6507730096785	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACTATGATGCTTTCGG	-10	True	NA	-9	True	ATTAAA	-25	NA	84187057	84177846	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_84179852_84179945_84180084_84180169_84180345_84181042_84181187_84181327_84181464_84181591_84181664_84181745_84181864_84181941_84182059_84182201_84182441_84183075_84183150_84183243_84183334_84183409_84183508_84183696_84183779_84184850_84185061_84186900
H1_mix_00032971	chr16	-	3424	9	NNC	ENSG00000140950.16	novel	1837	9	NA	NA	-4	1627	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	77.5176391216864	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGCCTCAGTTAAAAAAAAAA	-16	True	NA	-4	True	ATTAAA	-25	NA	84504663	84478069	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_84480027_84480528_84480709_84482591_84482711_84486630_84487060_84489277_84489423_84495682_84495914_84497933_84498112_84502720_84502843_84504600
H1_mix_00032972	chr16	-	3467	9	NIC	ENSG00000140950.16	novel	1837	9	NA	NA	6	1629	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	79.1675438547894	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCTCAGTTAAAAAAAAAATT	NA	False	NA	-2	True	ATTAAA	-27	NA	84504684	84478067	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_84480027_84480528_84480709_84482591_84482711_84486630_84487060_84489277_84489423_84495682_84495914_84497933_84498112_84502720_84502863_84504600
H1_mix_00032975	chr16	-	1868	5	NNC	ENSG00000103187.8	novel	1842	4	NA	NA	0	28819	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	408.399314397074	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGAATAAGACAAATGAAGC	-2	True	NA	NA	False	NA	NA	NA	84618078	84536776	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_84536808_84565600_84566956_84590104_84590263_84617500_84617584_84617837
H1_mix_00032976	chr16	-	1842	4	FSM	ENSG00000103187.8	ENST00000262428.5	1842	4	0	0	0	0	multi-exon	FALSE	canonical	3	828	junction_1	84.2060963747083	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGGTTTCTGATTTGT	-2	True	NA	-20	True	AATAAA	-24	NA	84618078	84565595	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_84566956_84590104_84590263_84617500_84617584_84617837
H1_mix_00032979	chr16	-	2628	5	FSM	ENSG00000131153.9	ENST00000253462.8	2628	5	0	0	0	0	multi-exon	FALSE	canonical	3	957	junction_4	55.9598070046708	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGGAAGATTTTATTTTT	12	True	NA	-10	True	CATAAA	-23	NA	85688954	85676197	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_85678338_85678539_85678667_85681581_85681682_85687459_85687575_85688808
H1_mix_00032982	chr16	-	911	4	FSM	ENSG00000154102.11	ENST00000284245.9	911	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	11.0855260988773	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGAATCCTTTTTTTTTT	39	False	85751117	92	True	AATAAA	-17	NA	85751096	85707516	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_85708067_85710163_85710308_85735189_85735236_85750925
H1_mix_00033005	chr16	-	1782	12	NNC	ENSG00000104731.14	novel	4572	17	NA	NA	-1	-179	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	33.1757155035661	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTGCTACTAAAAGATGGA	-16	True	NA	NA	False	NA	NA	NA	87765973	87698327	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_87698463_87708349_87708467_87709264_87709668_87711234_87711444_87714497_87714574_87726764_87726925_87730551_87730645_87748672_87748810_87755193_87755293_87756398_87756478_87761948_87762041_87765791
H1_mix_00033006	chr16	-	1924	12	FSM	ENSG00000104731.14	ENST00000270583.10	1924	12	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	17.0453939392862	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCGCGGAGGGTGTCTTC	-29	True	NA	NA	False	AATAAA	-18	NA	87765986	87707811	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_87708076_87708349_87708467_87709264_87709668_87711234_87711444_87714497_87714574_87726764_87726925_87730551_87730645_87748672_87748810_87755193_87755293_87756398_87756478_87761948_87762041_87765791
H1_mix_00033011	chr16	-	692	6	FSM	ENSG00000051523.11	ENST00000261623.8	692	6	0	0	0	0	multi-exon	FALSE	canonical	3	2382	junction_1	134.6054976589	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCGTGAGCCTCTGCCTGG	-6	True	NA	-4	True	AATAAA	-17	NA	88651053	88643288	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_88643572_88646115_88646198_88646754_88646839_88647100_88647176_88648044_88648115_88650955
H1_mix_00033012	chr16	-	405	6	FSM	ENSG00000051523.11	ENST00000566229.1	405	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	1020.96562136048	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGCCCAAGCCCCGGGAGC	1254	False	NA	NA	False	NA	NA	NA	88650314	88643539	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_88643572_88646115_88646198_88646754_88646839_88647100_88647176_88648044_88648115_88650252
H1_mix_00033013	chr16	-	624	4	FSM	ENSG00000051523.11	ENST00000562209.1	624	4	0	0	0	0	multi-exon	FALSE	canonical	3	2481	junction_1	114.805148936022	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCGAGCGGCATCTACC	537	False	NA	NA	False	NA	NA	NA	88651031	88646140	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_88646198_88646754_88647176_88648044_88648115_88650955
H1_mix_00033014	chr16	-	1078	3	FSM	ENSG00000167508.12	ENST00000561895.1	499	3	0	-579	0	4	multi-exon	FALSE	canonical	3	547	junction_2	42.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCGTTTTTCTGTTTCGTA	8124	False	NA	-1	True	AATAAA	-24	NA	88654985	88651930	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_88652606_88653299_88653409_88654691
H1_mix_00033016	chr16	-	1808	10	FSM	ENSG00000167508.12	ENST00000301012.8	1799	10	0	-9	0	4	multi-exon	TRUE	canonical	3	465	junction_4	48.883080463035	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCGTTTTTCTGTTTCGTA	18	True	NA	-1	True	AATAAA	-24	NA	88663091	88651930	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_88652606_88653299_88653409_88654691_88654808_88655198_88655418_88655655_88655731_88656104_88656305_88657435_88657583_88657914_88658030_88658649_88658721_88663010
H1_mix_00033017	chr16	-	870	8	FSM	ENSG00000167508.12	ENST00000569177.5	870	8	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	234.277264655992	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGAGATGGCCCGCTGCAT	-28	True	NA	NA	False	NA	NA	NA	88663137	88655384	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_88655418_88655655_88655731_88656104_88656305_88657145_88657248_88657435_88657583_88657914_88658030_88658649_88658721_88663010
H1_mix_00033018	chr16	-	888	5	FSM	ENSG00000167508.12	ENST00000563785.5	888	5	0	0	0	0	multi-exon	FALSE	canonical	3	514	junction_2	37.817819873705	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCTGCCTGCATTGGCTG	15	True	NA	NA	False	NA	NA	NA	88663094	88655833	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_88656305_88657435_88657583_88657914_88658030_88658649_88658721_88663010
H1_mix_00033019	chr16	-	809	5	FSM	ENSG00000167508.12	ENST00000568709.5	809	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	248.271021265068	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGGGGTGGGGCGGGT	9162	False	NA	NA	False	NA	NA	NA	88663029	88656104	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_88656562_88657435_88657583_88657914_88658030_88658649_88658721_88663010
H1_mix_00033023	chr16	-	1740	3	FSM	ENSG00000185669.6	ENST00000332281.6	1740	3	0	0	0	0	multi-exon	TRUE	canonical	3	45	junction_2	5.5	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCATGTTCCGTTCTTCG	-10	True	NA	-11	True	AATAAA	-14	NA	88686507	88677687	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_88678630_88681093_88681715_88686330
H1_mix_00033025	chr16	-	2892	7	FSM	ENSG00000103335.22	ENST00000484567.6	2884	7	0	-8	0	0	multi-exon	TRUE	canonical	3	155	junction_4	17.2086864370552	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCAGTCCCCCGTCCTTGC	6927	False	NA	1	True	ATTAAA	-33	NA	88718741	88715337	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_88715855_88715932_88716120_88716197_88716278_88716360_88716484_88716558_88716732_88716805_88716899_88717022
H1_mix_00033028	chr16	-	827	6	NNC	ENSG00000198931.11	novel	931	5	NA	NA	0	14879	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2245.059339973	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGCGGGGTTGGGCTGGGC	-1	True	NA	NA	False	ATTAAA	-24	NA	88811928	88794459	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_88794486_88809468_88809841_88810069_88810149_88810422_88810557_88811549_88811657_88811819
H1_mix_00033031	chr16	-	664	5	FSM	ENSG00000198931.11	ENST00000426324.6	664	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2079.327941307	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCGTCTCCTGTCCTCCT	2	True	NA	-5	True	AGTAAA	-15	NA	88811925	88809468	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_88809707_88810069_88810149_88810422_88810557_88811549_88811657_88811819
H1_mix_00033032	chr16	-	667	4	FSM	ENSG00000198931.11	ENST00000567391.5	667	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2038.97343451715	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCGTCTCCTGTCCTCCT	-1	True	NA	-5	True	AGTAAA	-15	NA	88811928	88809468	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_88809841_88810069_88810149_88811549_88811657_88811819
H1_mix_00033036	chr16	-	469	3	FSM	ENSG00000129993.15	ENST00000569443.5	469	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	0.5	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTGGGCAGGGACAGC	NA	False	NA	NA	False	NA	NA	NA	88941844	88892243	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_88892486_88901503_88901657_88941770
H1_mix_00033040	chr16	-	780	5	FSM	ENSG00000259803.8	ENST00000563595.6	780	5	0	0	0	0	multi-exon	TRUE	canonical	3	70	junction_2	7.29725975966321	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCGAAGCCGGGGGCTG	2837	False	NA	NA	False	NA	NA	NA	89198840	89196150	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_89196306_89197297_89197410_89198121_89198337_89198441_89198551_89198651
H1_mix_00033041	chr16	-	2492	1	FSM	ENSG00000259877.2	ENST00000570267.2	2443	1	39	-88	39	88	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTTTCACTCTCATGAT	37	False	NA	89	True	NA	NA	NA	89217614	89215122	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_89215100_89217600
H1_mix_00033043	chr16	-	9306	13	FSM	ENSG00000167522.17	ENST00000301030.10	9301	13	0	-5	0	5	multi-exon	FALSE	canonical	3	42	junction_5	45.0834873688065	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACAGTGCGTCCCTCC	12	True	NA	-11	True	AATAAA	-20	NA	89490561	89267624	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_89268664_89270816_89270910_89274813_89274958_89275092_89275192_89279071_89285650_89286038_89286187_89288527_89288671_89290624_89290829_89291012_89291184_89305205_89305345_89316932_89317079_89418283_89418369_89490244
H1_mix_00033046	chr16	-	2797	7	FSM	ENSG00000167522.17	ENST00000562275.6	2797	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	66.7543173801432	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGTTTCCTCTATTCT	NA	False	NA	-1	True	AATAAA	-26	NA	89418312	89286656	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_89288671_89290624_89290829_89291012_89291184_89291680_89291778_89305205_89305345_89316932_89317076_89418283
H1_mix_00033047	chr16	-	2817	7	FSM	ENSG00000167522.17	ENST00000642695.1	2801	7	0	-16	0	0	multi-exon	FALSE	canonical	3	116	junction_1	31.3071699278119	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGTTTCCTCTATTCT	1203	False	NA	-1	True	AATAAA	-26	NA	89490302	89286656	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_89288671_89290624_89290829_89291012_89291184_89305205_89305345_89316932_89317079_89418283_89418369_89490244
H1_mix_00033051	chr16	-	2335	8	NNC	ENSG00000131165.16	novel	2444	8	NA	NA	0	13164	intron_retention	FALSE	non_canonical	0	0	junction_1	182.249212646321	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAATATCCAAGACTGG	18	True	NA	NA	False	NA	NA	NA	89657675	89627651	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_89627680_89644436_89646088_89646526_89646715_89647202_89647332_89649350_89649498_89651568_89651647_89653903_89653924_89657581
H1_mix_00033052	chr16	-	2349	7	FSM	ENSG00000131165.16	ENST00000397901.8	2342	7	0	-7	0	7	multi-exon	FALSE	canonical	3	465	junction_3	35.0463978177501	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTGCTTTGGAGCCTT	-15	True	NA	0	True	AATAAA	-26	NA	89657708	89644427	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_89646088_89646526_89646715_89647202_89647332_89649350_89649498_89651568_89651647_89653903_89653924_89657581
H1_mix_00033053	chr16	-	2350	6	FSM	ENSG00000131165.16	ENST00000675909.1	2550	6	0	200	0	-2	multi-exon	FALSE	canonical	3	41	junction_5	181.326887140325	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTCTCAAGCTTTGCTT	NA	False	NA	-9	True	AATAAA	-17	NA	89657738	89644436	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_89646088_89646526_89646715_89647202_89647332_89649350_89649498_89651568_89651647_89657581
H1_mix_00033056	chr16	-	692	3	FSM	ENSG00000158792.16	ENST00000569918.1	692	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	45.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTGCAGGCACGGCGT	63	False	NA	NA	False	NA	NA	NA	89701640	89698067	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_89698306_89700929_89701234_89701490
H1_mix_00033058	chr16	-	2664	15	FSM	ENSG00000075399.14	ENST00000389386.8	2660	15	0	-4	0	4	multi-exon	FALSE	canonical	2	4	junction_14	12.9104055485709	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGTGTGGCTCCCTCAATC	8	True	NA	-2	True	AATAAA	-20	NA	89720898	89707129	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_89707955_89708426_89708532_89708856_89708957_89709226_89709436_89709776_89709907_89710585_89711011_89711326_89711413_89711881_89711970_89712046_89712100_89712459_89712523_89712604_89712717_89716461_89716625_89716729_89716823_89719026_89719103_89720762
H1_mix_00033059	chr16	-	775	6	FSM	ENSG00000075399.14	ENST00000565023.1	775	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	11.8084715353004	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTACTGAGGACCATCCTG	8956	False	NA	NA	False	NA	NA	NA	89710642	89707783	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_89707955_89708426_89708532_89708856_89708957_89709226_89709436_89709776_89709910_89710585
H1_mix_00033060	chr16	-	5452	43	FSM	ENSG00000187741.15	ENST00000389301.8	5452	43	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	54.1566605095903	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGATTCTTGTCTTTTT	-4	True	NA	-6	True	AAGAAA	-23	NA	89816647	89737548	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_89738709_89738881_89738975_89739132_89739290_89739477_89739554_89739993_89740100_89740803_89740867_89742799_89742939_89744958_89745072_89746583_89746689_89746830_89746891_89748658_89748768_89749729_89749903_89752137_89752223_89758576_89758706_89761948_89762023_89764889_89765067_89767140_89767238_89769836_89770025_89770165_89770260_89770563_89770635_89771677_89771815_89773270_89773385_89775741_89775816_89778800_89778851_89778942_89779004_89779868_89779958_89782858_89782919_89783006_89783103_89784853_89784965_89791402_89791537_89791926_89792069_89792470_89792548_89795905_89796019_89799165_89799233_89799604_89799639_89803258_89803342_89805279_89805393_89808293_89808368_89810706_89810803_89810928_89811072_89814519_89814614_89815876_89815987_89816536
H1_mix_00033061	chr16	-	4601	43	FSM	ENSG00000187741.15	ENST00000568369.5	4601	43	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	47.3160898455974	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGAAGGCTACTTGAGCC	-3	True	NA	-5	True	AATAAA	-17	NA	89816646	89738402	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_89738709_89738881_89738975_89739128_89739290_89739477_89739554_89739993_89740100_89740803_89740867_89742799_89742939_89744958_89745072_89746583_89746689_89746830_89746891_89748658_89748768_89749729_89749903_89752137_89752223_89758576_89758706_89761948_89762023_89764889_89765067_89767140_89767238_89769836_89770025_89770165_89770260_89770563_89770635_89771677_89771815_89773270_89773385_89775741_89775816_89778800_89778851_89778942_89779004_89779868_89779958_89782858_89782919_89783006_89783103_89784853_89784965_89791402_89791537_89791926_89792069_89792470_89792548_89795905_89796019_89799165_89799233_89799604_89799639_89803258_89803342_89805279_89805393_89808293_89808368_89810706_89810803_89810928_89811072_89814519_89814614_89815876_89815987_89816536
H1_mix_00033062	chr16	-	747	4	FSM	ENSG00000187741.15	ENST00000562424.1	745	4	0	-2	0	0	multi-exon	FALSE	canonical	0	0	junction_2	124.526659350072	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAGTGGGGAAAGGAATC	NA	False	NA	-38	True	AAAAAG	-24	NA	89739758	89738492	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_89738709_89738881_89738975_89739132_89739290_89739477
H1_mix_00033064	chr16	-	4162	38	ISM	ENSG00000187741.15	ENST00000568369.5	4601	43	7884	281	-396	-54	3prime_fragment	FALSE	canonical	0	0	junction_6	47.0040950611762	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGAGGTGAGCGCCGCC	7881	False	NA	NA	False	NA	NA	NA	89808762	89738683	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_89738709_89738881_89738975_89739128_89739290_89739477_89739554_89739993_89740100_89740803_89740867_89742799_89742939_89744958_89745072_89746583_89746689_89746830_89746891_89748658_89748768_89749729_89749903_89752137_89752223_89758576_89758706_89761948_89762023_89764889_89765067_89767140_89767238_89769836_89770025_89770165_89770260_89770563_89770635_89771677_89771815_89773270_89773385_89775741_89775816_89778800_89778851_89778942_89779004_89779868_89779958_89782858_89782919_89783006_89783103_89784853_89784965_89791402_89791537_89791926_89792069_89792470_89792548_89795905_89796019_89799165_89799233_89799604_89799639_89803258_89803342_89805279_89805393_89808293
H1_mix_00033072	chr16	-	2202	10	FSM	ENSG00000187741.15	ENST00000566889.5	2201	10	0	-1	0	1	multi-exon	FALSE	canonical	3	76	junction_1	44.1162885290711	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTACATGTGCATCAGTTA	-4	True	NA	-2	True	AATAAA	-22	NA	89816647	89798352	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_89799080_89799165_89799233_89799604_89799639_89803258_89803342_89805279_89805393_89808293_89808368_89810706_89810803_89810928_89811072_89814519_89814614_89815876
H1_mix_00033073	chr16	-	1662	11	FSM	ENSG00000187741.15	ENST00000389302.7	1641	11	0	-21	0	1	multi-exon	FALSE	canonical	3	76	junction_1	44.7237073597438	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTACATGTGCATCAGTTA	-14	True	NA	-2	True	AATAAA	-22	NA	89816657	89798352	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_89799080_89799165_89799233_89799604_89799639_89803258_89803342_89805279_89805393_89808293_89808368_89810706_89810803_89810928_89811072_89814519_89814614_89815876_89815987_89816536
H1_mix_00033074	chr16	-	1694	10	FSM	ENSG00000187741.15	ENST00000563673.5	1694	10	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_3	20.5882622678524	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGAATAAAGCACTGTGT	8	True	NA	-34	True	ATTAAA	-32	NA	89816635	89798384	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_89799233_89799604_89799639_89803258_89803342_89805279_89805393_89808293_89808368_89810706_89810803_89810928_89811072_89814519_89814614_89815876_89815987_89816536
H1_mix_00033075	chr16	-	2744	1	FSM	ENSG00000177946.7	ENST00000646748.1	2744	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTTTAAAAGCTCATATA	273	False	NA	-25	True	ATTAAA	-17	NA	89972534	89969790	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_89969800_89972500
H1_mix_00033076	chr16	-	2056	4	FSM	ENSG00000003249.15	ENST00000002501.11	2056	4	0	0	0	0	multi-exon	FALSE	canonical	3	654	junction_3	25.6645020732269	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGGCCACAGTCTCTTC	0	True	NA	-7	True	ATTAAA	-20	NA	90019456	90004870	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_90006493_90008783_90008925_90009283_90009431_90019310
H1_mix_00033077	chr16	-	2073	4	FSM	ENSG00000003249.15	ENST00000568838.2	2073	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	311.14412523245	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGGCCACAGTCTCTTC	-26	True	NA	-7	True	ATTAAA	-20	NA	90019890	90004870	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_90006493_90008783_90008925_90009283_90009431_90019727
H1_mix_00033080	chr16	+	212	1	Intergenic	novelGene_497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGGTGAGCTGAGATCATG	NA	False	NA	NA	False	NA	NA	NA	2132300	2132512	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_2132300_2132500
H1_mix_00033081	chr16	+	579	1	Intergenic	novelGene_498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAAAGACAGGTGCCCTCT	3473	False	NA	NA	False	NA	NA	NA	2152137	2152716	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_2152100_2152700
H1_mix_00033082	chr16	+	5380	1	Intergenic	novelGene_502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	434	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGTCAGCGAAGGGACAT	NA	False	NA	NA	False	NA	NA	NA	13352290	13357670	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_13352300_13357700
H1_mix_00033083	chr16	+	684	1	Intergenic	novelGene_505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGAAGTCGCTGAGAATG	NA	False	NA	NA	False	NA	NA	NA	16571301	16571985	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_16571300_16572000
H1_mix_00033084	chr16	+	221	1	Intergenic	novelGene_510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGCAGCCCTAGATT	NA	False	NA	NA	False	NA	NA	NA	21421148	21421369	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_21421100_21421400
H1_mix_00033085	chr16	+	3634	1	Intergenic	novelGene_511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGGTTTCTGGCATCTC	NA	False	NA	NA	False	NA	NA	NA	21432707	21436341	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_21432700_21436300
H1_mix_00033086	chr16	+	823	1	Intergenic	novelGene_513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGCTGTGGTGGCTCAC	NA	False	NA	NA	False	ATTAAA	-22	NA	21842025	21842848	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_21842000_21842800
H1_mix_00033087	chr16	+	1030	1	Intergenic	novelGene_514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATAAGGAGAAAGTGGG	2375	False	NA	NA	False	NA	NA	NA	22476407	22477437	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_22476400_22477400
H1_mix_00033088	chr16	+	643	1	Intergenic	novelGene_515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCCTCCTCCTGCGTTCC	NA	False	NA	NA	False	NA	NA	NA	24781035	24781678	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_24781000_24781700
H1_mix_00033089	chr16	+	441	1	Intergenic	novelGene_516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4651	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACAGCAGGAGTAGTGAT	NA	False	NA	NA	False	NA	NA	NA	28653785	28654226	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_28653800_28654200
H1_mix_00033091	chr16	+	1049	1	FSM	ENSG00000288983.1	ENST00000689900.1	1045	1	-4	0	-4	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTTGTAACTTTACTAAA	NA	False	NA	NA	False	CATAAA	-19	NA	30634523	30635572	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30634500_30635600
H1_mix_00033092	chr16	+	327	1	Intergenic	novelGene_522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	325	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCGACCTAAATTCCAGTC	NA	False	NA	NA	False	NA	NA	NA	34997535	34997862	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_34997500_34997900
H1_mix_00033094	chr16	+	1731	1	Intergenic	novelGene_524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTCTACTAAAAATACAAAAA	1397	False	NA	NA	False	NA	NA	NA	50247539	50249270	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_50247500_50249300
H1_mix_00033096	chr16	+	694	1	Intergenic	novelGene_525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAATGAACAAAACTTCCAA	NA	False	NA	NA	False	ATTAAA	-5	NA	55719760	55720454	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_55719800_55720500
H1_mix_00033098	chr16	+	293	1	Intergenic	novelGene_527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTGAAGATGGAAGACTG	NA	False	NA	NA	False	TTTAAA	-23	NA	65276197	65276490	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_65276200_65276500
H1_mix_00033102	chr16	+	1001	1	Intergenic	novelGene_530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAGAAAAGAAATTCCT	NA	False	NA	NA	False	NA	NA	NA	71767938	71768939	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_71767900_71768900
H1_mix_00033103	chr16	+	302	1	Intergenic	novelGene_531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGACCACATTTTGTTTA	4387	False	NA	NA	False	NA	NA	NA	71912668	71912970	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_71912700_71913000
H1_mix_00033106	chr16	+	2074	1	Intergenic	novelGene_532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCAGGGCTTGGCTGGC	1661	False	NA	NA	False	NA	NA	NA	78101346	78103420	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_78101300_78103400
H1_mix_00033108	chr16	+	392	1	Intergenic	novelGene_533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTCTTGTGTAAGAATTC	8982	False	NA	NA	False	AAAACA	-45	NA	86743796	86744188	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_86743800_86744200
H1_mix_00033111	chr16	+	271	2	Antisense	novelGene_ENSG00000161980.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCACCTCAAAAGGTTTA	NA	False	NA	NA	False	NA	NA	NA	23862	47296	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr16_+_23886_47048
H1_mix_00033112	chr16	+	864	6	NNC	ENSG00000161981.11	novel	831	6	NA	NA	25	48989	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	393.531904678642	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCAGGAACAATTCCTTT	-5	True	NA	NA	False	ATTAAA	-27	NA	53853	106658	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_54059_55458_55550_55776_55883_56538_56614_57085_57442_106627
H1_mix_00033113	chr16	+	1130	4	FSM	ENSG00000161981.11	ENST00000466183.1	1130	4	0	0	0	0	multi-exon	FALSE	canonical	3	921	junction_1	51.0838091331838	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTTGAAAAGTAGAAAGCCA	1101	False	NA	11	True	AATAAA	-16	NA	54959	57444	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_55550_55776_55883_56538_56614_57085
H1_mix_00033116	chr16	+	3149	14	FSM	ENSG00000167930.17	ENST00000301679.7	3326	14	0	177	0	5	multi-exon	FALSE	canonical	1	11	junction_13	240.784442871615	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGTTGTGGAGTCAAATAA	NA	False	NA	NA	False	NA	NA	NA	234520	269903	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_234858_249548_249655_254380_254682_259482_259600_259968_260161_261383_261515_262092_262226_262423_262554_263261_263403_263699_263776_264015_264172_264613_264717_264810_264909_268775
H1_mix_00033119	chr16	+	719	4	FSM	ENSG00000103202.13	ENST00000454619.5	719	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1009.11193080297	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGGTACGGCAGGGCAG	3	True	NA	NA	False	NA	NA	NA	396768	399474	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_397080_398207_398386_398989_399124_399378
H1_mix_00033120	chr16	+	966	5	FSM	ENSG00000103202.13	ENST00000433358.5	966	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	939.572608955795	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGGTGGTACACTAATTA	2	True	NA	22	True	ATTAAA	-18	NA	397236	400648	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_397314_398989_399124_399378_399481_399626_399740_400108
H1_mix_00033122	chr16	+	1533	9	NNC	ENSG00000242612.7	novel	1551	9	NA	NA	0	-13	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_6	64.2670210916921	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTGCTGGTGATCCTAT	-1	True	NA	-1	True	ATTAAA	-2	NA	401884	412468	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_402044_404955_405025_406345_406398_407424_407561_410242_410368_410690_410781_410971_411077_411360_411579_411889
H1_mix_00033124	chr16	+	2697	5	ISM	ENSG00000242612.7	ENST00000437024.5	1738	11	6760	11	-924	-5	3prime_fragment	FALSE	canonical	3	187	junction_1	18.280795934532	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGATCCTATCGTTTAGG	1507	False	NA	7	True	ATTAAA	-10	NA	408674	412476	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_410368_410690_410785_410971_411077_411360_411579_411889
H1_mix_00033125	chr16	+	5865	15	FSM	ENSG00000090565.17	ENST00000434585.5	3550	15	-772	-1543	-42	887	multi-exon	TRUE	canonical	1	51	junction_3	44.4359203843936	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGGCATGAGAATGGCG	-29	True	NA	NA	False	NA	NA	NA	425606	523898	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_426721_461403_461498_471294_471390_482524_482737_488850_489001_491133_491269_496823_496860_503003_503098_505523_505628_510659_510801_518942_519025_519753_519892_520121_520278_520458_520600_520725
H1_mix_00033126	chr16	+	669	4	FSM	ENSG00000090565.17	ENST00000487899.1	669	4	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	22.573337271116	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAGGTGAGCTGCCAACA	0	True	NA	NA	False	NA	NA	NA	502749	519018	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_503098_505523_505628_510659_510801_518942
H1_mix_00033128	chr16	+	911	3	FSM	ENSG00000103326.12	ENST00000568988.5	911	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	60.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTGGAGCAGCGGCGGCA	60	True	NA	NA	False	NA	NA	NA	527822	548209	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_528030_533945_533999_547558
H1_mix_00033130	chr16	+	2026	2	FSM	ENSG00000257108.2	ENST00000540585.1	2071	2	0	45	0	-45	multi-exon	FALSE	canonical	2	3	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCGCAATGTAGTTAGGT	-16	True	NA	NA	False	NA	NA	NA	567004	569450	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_567076_567495
H1_mix_00033131	chr16	+	1115	4	FSM	ENSG00000282907.1	ENST00000635107.1	1289	4	174	0	174	0	multi-exon	FALSE	canonical	3	15	junction_1	102.931476667193	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGACTGGGGTGGAGCCC	685	False	NA	NA	False	NA	NA	NA	569634	576257	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_569796_574065_574764_575838_575971_576133
H1_mix_00033137	chr16	+	694	2	FSM	ENSG00000172366.20	ENST00000619377.1	727	2	0	33	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGGGGGGAGGGGAACT	2265	False	NA	NA	False	NA	NA	NA	636816	638587	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_636946_638022
H1_mix_00033138	chr16	+	702	4	FSM	ENSG00000172366.20	ENST00000474840.5	702	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	147.459222235241	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGAGTGTCTTTGACT	-4	True	NA	23	True	AATAAA	-15	NA	641928	648474	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_642044_642119_642250_647782_647885_648119
H1_mix_00033140	chr16	+	2304	3	FSM	ENSG00000172366.20	ENST00000619674.1	2306	3	0	2	0	-2	multi-exon	FALSE	canonical	3	87	junction_1	127	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGGAGTGTCTTTGA	2223	False	NA	21	True	AATAAA	-13	NA	645125	648472	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_646609_647416_647885_648119
H1_mix_00033141	chr16	+	5881	40	NIC	ENSG00000161996.19	novel	5589	41	NA	NA	3	0	intron_retention	FALSE	canonical	3	31	junction_7	24.3786155632028	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATTGCTGCATTGTTGCA	3	True	NA	32	True	AATAAA	-17	NA	649367	667829	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_649855_649990_650168_650253_650363_650538_650710_650994_651104_651198_651267_651643_651748_651823_652040_652466_652536_653340_653452_653524_653671_653745_653804_655028_655148_655306_655469_655572_655704_655772_655890_656301_656538_656731_656872_657090_657222_657761_657893_658182_658345_658524_658654_658895_659012_659085_659127_659244_659377_660057_660162_660611_660715_661050_661173_661341_661502_661596_661788_661890_662060_662219_662332_662672_662845_665678_665802_665949_666125_666219_666351_666454_666599_666672_666793_666904_666990_667431
H1_mix_00033145	chr16	+	2257	12	FSM	ENSG00000161996.19	ENST00000549024.5	2257	12	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_5	29.90840010255	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATTGCTGCATTGTTGCA	NA	False	NA	32	True	AATAAA	-17	NA	661064	667829	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_661502_661596_661788_661890_662060_662219_662332_662672_662845_665678_665802_665949_666125_666219_666351_666454_666599_666672_666793_666904_666990_667431
H1_mix_00033146	chr16	+	1941	6	FSM	ENSG00000161996.19	ENST00000553080.1	1941	6	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	8.23164625090267	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATTGCTGCATTGTTGCA	NA	False	NA	32	True	AATAAA	-17	NA	664987	667829	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_665802_665949_666125_666219_666351_666454_666793_666904_666990_667431
H1_mix_00033149	chr16	+	2570	18	FSM	ENSG00000140983.14	ENST00000569675.5	2559	18	-11	0	0	0	multi-exon	FALSE	canonical	3	211	junction_5	259.685609761024	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTTTGTCTTTATGT	5	True	NA	15	True	NA	NA	NA	668123	674174	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_668237_668352_668412_668487_668700_669552_669607_670122_670176_670265_670358_670455_670558_670674_670774_670891_671001_671082_671204_671696_671782_671859_672003_672083_672182_672253_672385_672488_672567_672702_672826_672927_673131_673479
H1_mix_00033150	chr16	+	2548	18	NNC	ENSG00000140983.14	novel	2490	19	NA	NA	3	0	intron_retention	FALSE	canonical	3	17	junction_14	282.639009495472	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCGGATCCCAGTCTCTG	8	True	NA	28	True	ATTAAA	-19	NA	668126	674125	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_668237_668352_668412_668487_668570_668655_668700_669552_669607_670122_670176_670248_670358_670455_670558_670674_670774_670891_671204_671696_671782_671859_672003_672083_672182_672253_672385_672471_672567_672702_672826_672927_673131_673479
H1_mix_00033151	chr16	+	2468	18	NIC	ENSG00000140983.14	novel	2490	19	NA	NA	3	0	intron_retention	FALSE	canonical	3	83	junction_8	283.06104835075	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCGGATCCCAGTCTCTG	8	True	NA	28	True	ATTAAA	-19	NA	668126	674125	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_668237_668352_668412_668487_668570_668655_668700_669552_669607_670122_670176_670248_670358_670455_670558_670773_671001_671082_671204_671696_671782_671859_672003_672083_672182_672253_672385_672488_672567_672702_672826_672927_673131_673479
H1_mix_00033152	chr16	+	2548	17	NIC	ENSG00000140983.14	novel	2490	19	NA	NA	-3	0	intron_retention	FALSE	canonical	3	83	junction_8	269.076015920687	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCGGATCCCAGTCTCTG	10	True	NA	28	True	ATTAAA	-19	NA	668128	674125	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_668237_668352_668412_668487_668570_668655_668700_669552_669607_670122_670176_670248_670358_670455_670558_670773_671204_671696_671782_671859_672003_672083_672182_672253_672385_672488_672567_672702_672826_672927_673131_673479
H1_mix_00033153	chr16	+	2545	18	NIC	ENSG00000140983.14	novel	2490	19	NA	NA	7	0	intron_retention	FALSE	canonical	3	211	junction_6	242.023519689812	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTGTTGTTTGTCTTTA	23	True	NA	12	True	NA	NA	NA	668141	674171	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_668237_668352_668412_668487_668570_668655_668700_669552_669607_670122_670176_670265_670358_670455_670558_670674_670774_670891_671204_671696_671782_671859_672003_672083_672182_672253_672385_672488_672567_672702_672826_672927_673131_673479
H1_mix_00033154	chr16	+	2435	19	NIC	ENSG00000140983.14	novel	2490	19	NA	NA	-7	0	intron_retention	FALSE	canonical	3	71	junction_9	278.37444806112	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCGGATCCCAGTCTCTG	25	False	NA	28	True	ATTAAA	-19	NA	668143	674125	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_668237_668352_668412_668487_668570_668655_668700_669552_669607_670122_670176_670248_670358_670455_670558_670674_670774_670888_671001_671082_671204_671696_671782_671859_672003_672083_672182_672253_672385_672488_672567_672702_672826_672927_673131_673479
H1_mix_00033161	chr16	+	1560	7	FSM	ENSG00000103266.11	ENST00000565677.5	1560	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	491.887746905283	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGGACGTGCTGGTGTGT	86	False	NA	20	True	AATAAA	-15	NA	680223	682746	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_680685_681062_681351_681437_681604_681792_681881_682019_682077_682164_682282_682363
H1_mix_00033163	chr16	+	757	6	FSM	ENSG00000103266.11	ENST00000567173.5	743	6	-14	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	520.795007656563	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGATCAGCTTTGAGCTGA	-5	True	NA	NA	False	NA	NA	NA	680409	682193	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_680685_681208_681351_681437_681604_681792_681881_682019_682077_682164
H1_mix_00033167	chr16	+	646	4	FSM	ENSG00000103260.9	ENST00000570132.1	503	4	0	-143	0	0	multi-exon	FALSE	canonical	3	30	junction_1	83.2519602705479	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGTGCTGGGGAGGGGC	106	False	NA	-81	True	NA	NA	NA	715236	717390	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_715394_715875_715985_716932_716993_717070
H1_mix_00033168	chr16	+	1016	3	FSM	ENSG00000103260.9	ENST00000219542.3	915	3	-101	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	19.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGTGCTGGGGAGGGGC	106	False	NA	-81	True	NA	NA	NA	715236	717390	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_715394_715583_715985_716932
H1_mix_00033170	chr16	+	1255	9	NNC	ENSG00000103253.19	novel	1512	8	NA	NA	-97	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	80.4887414487269	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCAGTGTTGGCAGATG	324	False	NA	9	True	AATAAA	-14	NA	726838	729715	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_726888_727411_727615_727964_728030_728115_728234_728315_728425_728503_728605_728793_728896_729008_729089_729287
H1_mix_00033171	chr16	+	1364	8	NNC	ENSG00000103253.19	novel	1512	8	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	64.0216800014189	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCAGTGTTGGCAGATG	132	False	NA	9	True	AATAAA	-14	NA	727257	729715	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_727615_727964_728030_728115_728234_728315_728425_728503_728605_728793_728896_729008_729093_729287
H1_mix_00033172	chr16	+	1292	7	NIC	ENSG00000103253.19	novel	1512	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	92.7818528712497	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCAGTGTTGGCAGATG	135	False	NA	9	True	AATAAA	-14	NA	727260	729715	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_727615_728115_728234_728315_728425_728503_728605_728793_728896_729008_729089_729287
H1_mix_00033173	chr16	+	1323	8	NNC	ENSG00000103253.19	novel	1512	8	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	71.6208839683522	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCAGTGTTGGCAGATG	-6	True	NA	9	True	AATAAA	-14	NA	727291	729715	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_727615_727964_728030_728115_728234_728315_728425_728503_728605_728796_728896_729008_729089_729287
H1_mix_00033176	chr16	+	3584	21	NIC	ENSG00000127586.17	novel	3092	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	328	junction_7	84.4336869975485	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACGTGCGAGTGGAGTG	-4	True	NA	27	True	TATAAA	-21	NA	788619	798072	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_788776_788930_789126_789209_789361_789546_789716_790176_790270_790346_790400_790524_791371_791850_791949_792223_792348_792438_792591_792717_792812_792965_793065_793143_793275_794053_794202_795131_795357_795684_795835_795946_796078_796716_796862_796960_797093_797693_797752_797838
H1_mix_00033177	chr16	+	3176	21	FSM	ENSG00000127586.17	ENST00000455171.6	3172	21	-4	0	0	0	multi-exon	FALSE	canonical	3	328	junction_7	91.6237414647536	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGTGCGAGTGGAGTGGG	-4	True	NA	29	True	TATAAA	-23	NA	788619	798074	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_788776_788930_789361_789546_789716_790176_790270_790346_790400_790524_790667_791160_791371_791850_791949_792223_792348_792438_792591_792717_792812_792965_793065_793143_793275_794053_794202_795131_795357_795684_795835_795946_796078_796716_796862_796960_797093_797693_797752_797838
H1_mix_00033178	chr16	+	2801	21	NIC	ENSG00000127586.17	novel	3092	22	NA	NA	44	4	combination_of_known_splicesites	FALSE	canonical	3	44	junction_15	133.98241489091	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTAATCACGTGCGAGTG	21	True	NA	22	True	TATAAA	-16	NA	788678	798067	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_788776_788930_789126_789209_789361_789546_789716_790176_790270_790346_790400_790524_790667_791160_791371_791850_791949_792223_792348_792438_792591_792717_792812_792965_793065_793143_793275_794053_794202_795684_795835_795946_796078_796716_796862_796960_797093_797693_797752_797838
H1_mix_00033180	chr16	+	1773	1	FSM	ENSG00000260532.1	ENST00000561511.1	1773	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGTCATCTGGCGGAGC	NA	False	NA	NA	False	ATTAAA	-15	NA	1111626	1113399	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1111600_1113400
H1_mix_00033181	chr16	+	633	1	FSM	ENSG00000277010.1	ENST00000621827.1	505	1	-43	-85	-43	85	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAGAGATGTTTATAGAT	NA	False	NA	122	True	NA	NA	NA	1223595	1224228	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1223600_1224200
H1_mix_00033185	chr16	+	3647	11	FSM	ENSG00000090581.11	ENST00000683887.1	1237	11	-24	-2386	0	0	multi-exon	FALSE	canonical	2	4	junction_3	114.555706972634	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGAAATATTTAAGTTCA	-16	True	NA	NA	False	AATAAA	-4	NA	1351930	1365737	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1352018_1352101_1352160_1352238_1352307_1361694_1361798_1361871_1361956_1362037_1362132_1362205_1362321_1362451_1362535_1362610_1362743_1362824_1362907_1362996
H1_mix_00033187	chr16	+	2049	1	FSM	ENSG00000279930.1	ENST00000624543.1	2162	1	34	79	34	-79	mono-exon	FALSE	NA	NA	NA	NA	NA	300	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCCGGCTGAGCTGGGC	6110	False	NA	NA	False	NA	NA	NA	1437187	1439236	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1437200_1439200
H1_mix_00033188	chr16	+	3288	21	NIC	ENSG00000100726.15	novel	3314	21	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	89.9207428794936	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGGAGTGTTGGTGGCC	-22	True	NA	NA	False	AATAAA	-15	NA	1493350	1510454	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_1493606_1494280_1494617_1495345_1495624_1497035_1497105_1497360_1497509_1499230_1499334_1500095_1500165_1500346_1500489_1500562_1500700_1501419_1501500_1501662_1501774_1502046_1502136_1502312_1502405_1502644_1502762_1502930_1503003_1505409_1505602_1506237_1506330_1506951_1507052_1507305_1507371_1507600_1507717_1509829
H1_mix_00033189	chr16	+	903	8	FSM	ENSG00000100726.15	ENST00000564507.5	903	8	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_7	100.766247993531	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGCTCTCGAGATGGCA	5554	False	NA	NA	False	NA	NA	NA	1501706	1506665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1501774_1502046_1502136_1502312_1502405_1502644_1502762_1502930_1503003_1505409_1505602_1506237_1506330_1506483
H1_mix_00033192	chr16	+	555	2	FSM	ENSG00000100726.15	ENST00000563676.1	555	2	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCGGCGCTGCACTGGC	9288	False	NA	NA	False	NA	NA	NA	1505440	1506631	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1505602_1506237
H1_mix_00033193	chr16	+	7961	21	NIC	ENSG00000007545.16	novel	7972	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	19	junction_15	14.1967425841282	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGACTGTCGTTTGTGCCT	-36	True	NA	23	True	CATAAA	-20	NA	1612359	1677906	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_1612658_1614638_1614986_1625972_1626167_1632211_1632366_1637823_1637908_1641138_1641188_1652495_1652582_1653032_1653157_1655218_1655301_1655876_1656993_1659885_1660064_1662489_1662672_1662760_1662836_1665056_1665139_1666072_1666178_1666421_1666601_1667334_1667401_1667961_1668185_1669000_1669166_1670663_1670810_1673880
H1_mix_00033194	chr16	+	550	5	FSM	ENSG00000007545.16	ENST00000415022.1	550	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	18.1297407593159	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGGATGCGCTGTCACA	NA	False	NA	NA	False	NA	NA	NA	1662604	1668108	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1662672_1662760_1662836_1665056_1665139_1666421_1666601_1667961
H1_mix_00033197	chr16	+	4375	5	FSM	ENSG00000206053.13	ENST00000569765.5	782	5	0	-3593	0	579	multi-exon	FALSE	canonical	3	48	junction_1	364.477965726325	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTATATTTTAATGCCC	-1	True	NA	NA	False	ATTAAA	-20	NA	1678312	1702859	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1678357_1683508_1683593_1685438_1685588_1697811_1697861_1698810
H1_mix_00033198	chr16	+	7212	31	NIC	ENSG00000138834.15	novel	5661	32	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	2	30	junction_5	35.3245429316974	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTTCCTGGGCCCA	40	False	NA	17	True	AATAAA	-16	NA	1706240	1770317	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_1706658_1724556_1724678_1729137_1729209_1729486_1729579_1743334_1745104_1747028_1747276_1748243_1748347_1748601_1748721_1758147_1758160_1759957_1760016_1760379_1760533_1761223_1761306_1762350_1762482_1762674_1762732_1762835_1763007_1763656_1763784_1764114_1764211_1764300_1764460_1765012_1765179_1765959_1766143_1766219_1766410_1766528_1766649_1766722_1766804_1766903_1766972_1767148_1767298_1767563_1767736_1767804_1767919_1768068_1768108_1768198_1768379_1768476_1768627_1768702
H1_mix_00033202	chr16	+	2214	5	FSM	ENSG00000095906.17	ENST00000567700.5	2196	5	-18	0	-18	0	multi-exon	FALSE	canonical	3	616	junction_1	41.2128620699898	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTGATGTTTCTAGAGT	NA	False	NA	15	True	ATTAAA	-22	NA	1782913	1789183	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1783037_1786536_1787832_1787940_1788052_1788137_1788208_1788568
H1_mix_00033203	chr16	+	732	3	FSM	ENSG00000095906.17	ENST00000566090.5	708	3	-24	0	0	0	multi-exon	FALSE	canonical	3	500	junction_2	58	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGGTGGCATTAGACGCC	-33	True	NA	NA	False	NA	NA	NA	1782931	1787264	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1783037_1786536_1786656_1786756
H1_mix_00033208	chr16	+	1953	1	FSM	ENSG00000095906.17	ENST00000563821.1	2235	1	292	-10	292	10	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAACGGCCGGGCGGCGCGT	2038	False	NA	NA	False	AAGAAA	-5	NA	1785002	1786955	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1785000_1787000
H1_mix_00033209	chr16	+	917	4	FSM	ENSG00000183751.16	ENST00000564171.1	917	4	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_3	47.4622657135821	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGCCCCAAGGGCAGGG	1633	False	NA	NA	False	NA	NA	NA	1976068	1977672	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1976115_1976210_1976315_1976813_1976962_1977053
H1_mix_00033210	chr16	+	1329	7	NIC	ENSG00000065054.14	novel	2160	7	NA	NA	-5	-7	combination_of_known_junctions	FALSE	canonical	2	7	junction_6	53.3335937493642	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCCATCCTGCCCCTGC	2	True	NA	NA	False	NA	NA	NA	2026896	2038121	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_2027219_2029581_2029783_2036323_2036504_2036727_2036882_2036954_2036999_2037537_2037601_2037756
H1_mix_00033212	chr16	+	2606	16	FSM	ENSG00000103197.18	ENST00000643745.1	2588	16	-18	0	0	0	multi-exon	FALSE	canonical	2	8	junction_11	54.1550859415192	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTAACACGGTGAAACCC	553	False	NA	NA	False	NA	NA	NA	2047966	2065219	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2048066_2048586_2048754_2050399_2050487_2053341_2053453_2054295_2054441_2055401_2055520_2056195_2056245_2056643_2056770_2057104_2057179_2058746_2058874_2060669_2060814_2060952_2061040_2061870_2062009_2062496_2062601_2062971_2063054_2064271
H1_mix_00033216	chr16	+	5465	41	FSM	ENSG00000103197.18	ENST00000644043.1	5457	41	-8	0	0	0	multi-exon	FALSE	canonical	2	2	junction_30	67.8856345260174	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCTTTTATTGACTTTG	16	False	NA	47	True	NA	NA	NA	2048032	2088718	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2048066_2048586_2048754_2050399_2050487_2053341_2053453_2054295_2054441_2055401_2055520_2056195_2056245_2056643_2056770_2057104_2057179_2058746_2058874_2060669_2060814_2061870_2062009_2062496_2062601_2062971_2063054_2064271_2064428_2065518_2065636_2070455_2070579_2071509_2071617_2071783_2071935_2072240_2072364_2072848_2072984_2074199_2074390_2075798_2075893_2076067_2076171_2076490_2076586_2079031_2079197_2079275_2079429_2079556_2079670_2080164_2080378_2081594_2081799_2082435_2082505_2083694_2083817_2084227_2084716_2084950_2085027_2085229_2085323_2086192_2086380_2086731_2086872_2087862_2087942_2088047_2088140_2088226_2088326_2088445
H1_mix_00033232	chr16	+	2607	14	NIC	ENSG00000167967.16	novel	2548	14	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	44.6355392142488	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTGATGTTGTGGCAG	14	True	NA	14	True	AATAAA	-15	NA	2223610	2235741	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_2223771_2228291_2228524_2229569_2229676_2232170_2232365_2232455_2232577_2232755_2232909_2233010_2233184_2233437_2233648_2233881_2233991_2234170_2234389_2234582_2234782_2234858_2235002_2235080_2235144_2235215
H1_mix_00033233	chr16	+	2318	13	NIC	ENSG00000167967.16	novel	2548	14	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	45.2720173568128	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGATGTTGTGGCAGT	14	True	NA	15	True	AATAAA	-16	NA	2223610	2235742	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_2223771_2228371_2228524_2229569_2229676_2232170_2232365_2232455_2232577_2232755_2232909_2233010_2233184_2233881_2233991_2234170_2234389_2234582_2234782_2234858_2235002_2235080_2235144_2235215
H1_mix_00033234	chr16	+	2547	14	NNC	ENSG00000167967.16	novel	2548	14	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	43.4274202365552	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGATGTTGTGGCAGT	14	True	NA	15	True	AATAAA	-16	NA	2223610	2235742	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_2223771_2228371_2228524_2229569_2229676_2232151_2232365_2232455_2232577_2232755_2232909_2233010_2233184_2233437_2233648_2233881_2233991_2234170_2234389_2234582_2234782_2234858_2235002_2235080_2235144_2235215
H1_mix_00033236	chr16	+	1996	6	FSM	ENSG00000167968.13	ENST00000564065.5	2194	6	198	0	198	0	multi-exon	FALSE	canonical	1	2	junction_1	2.33238075793812	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCTCCCAGGCCTCTG	NA	False	NA	NA	False	AATAAA	-27	NA	2236013	2238711	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2236961_2237037_2237127_2237217_2237302_2237375_2237650_2237766_2238019_2238361
H1_mix_00033240	chr16	+	2156	8	FSM	ENSG00000162062.15	ENST00000569994.5	2156	8	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	50.6016858636637	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGTTTATTTATGTTT	-5	True	NA	16	True	ATTAAA	-16	NA	2460117	2464962	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2460171_2460282_2460694_2460815_2461225_2461746_2461801_2462148_2462240_2462414_2462527_2462630_2462733_2464038
H1_mix_00033241	chr16	+	1813	8	NIC	ENSG00000162062.15	novel	1633	10	NA	NA	4	0	intron_retention	FALSE	canonical	3	34	junction_1	78.2286027340019	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTATTTATGTTTT	-1	True	NA	17	True	ATTAAA	-17	NA	2460121	2464963	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_2460171_2460622_2460694_2460815_2461225_2461746_2461801_2462148_2462240_2462414_2462527_2462630_2462733_2464038
H1_mix_00033242	chr16	+	1992	8	ISM	ENSG00000162062.15	ENST00000483320.5	1709	9	9	0	-3	0	intron_retention	FALSE	canonical	3	204	junction_1	20.7344729218502	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTATTTATGTTTT	31	False	NA	17	True	ATTAAA	-17	NA	2460153	2464963	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_2460382_2460622_2460694_2460815_2461225_2461746_2461801_2462148_2462240_2462414_2462527_2462630_2462733_2464038
H1_mix_00033243	chr16	+	310	1	FSM	ENSG00000260293.2	ENST00000561847.2	5616	1	-55	5361	-55	-5361	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAACAATAAATTTGGCCA	1371	False	NA	NA	False	NA	NA	NA	2476502	2476812	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2476500_2476800
H1_mix_00033244	chr16	+	501	3	FSM	ENSG00000185883.12	ENST00000568562.1	477	3	-24	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	801	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATCTTCGCCGAGGTGCT	-10	True	NA	NA	False	NA	NA	NA	2513951	2519679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2514130_2519217_2519402_2519540
H1_mix_00033245	chr16	+	1478	10	FSM	ENSG00000162066.16	ENST00000568263.5	1482	10	4	0	4	0	multi-exon	FALSE	canonical	3	9	junction_1	77.6029781788188	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGGTGCAGCCCCACGT	-20	True	NA	NA	False	NA	NA	NA	2520360	2530491	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2520542_2520983_2521124_2527560_2527616_2527772_2527986_2528059_2528149_2528235_2528381_2528451_2528719_2528993_2529096_2529474_2529526_2530256
H1_mix_00033249	chr16	+	3490	10	ISM	ENSG00000162066.16	ENST00000293971.11	3172	11	60	1	-5	-1	intron_retention	FALSE	canonical	3	126	junction_8	33.4796787453059	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGAGCAGTTCTGTGACA	-14	True	NA	26	True	AATACA	-21	NA	2520430	2531416	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_2520542_2520768_2520906_2520983_2521124_2527560_2527616_2527772_2527986_2528059_2528149_2528235_2528381_2528451_2528560_2528649_2528719_2528993
H1_mix_00033250	chr16	+	3322	5	ISM	ENSG00000162066.16	ENST00000293971.11	3172	11	7402	1	-106	-1	intron_retention	FALSE	canonical	3	126	junction_4	39.0664498003082	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGAGCAGTTCTGTGACA	7271	False	NA	26	True	AATACA	-21	NA	2527772	2531416	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_2527986_2528059_2528149_2528235_2528381_2528451_2528560_2528649
H1_mix_00033252	chr16	+	4746	11	FSM	ENSG00000140992.19	ENST00000268673.11	4728	11	-18	0	6	0	multi-exon	FALSE	canonical	3	8	junction_3	17.9064234284795	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGATTTCTTACTTTT	-2	True	NA	31	True	TTTAAA	-27	NA	2537984	2601095	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2538137_2557702_2557964_2561479_2561523_2577424_2577501_2581294_2581364_2581606_2581704_2583411_2583586_2586675_2586894_2595792_2595851_2597122_2597276_2597650
H1_mix_00033254	chr16	+	1459	1	FSM	ENSG00000279901.1	ENST00000623937.1	1659	1	-138	338	-138	-338	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTTCAAAACCAACCGGGCC	443	False	NA	NA	False	NA	NA	NA	2682967	2684426	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2683000_2684400
H1_mix_00033256	chr16	+	9026	15	NIC	ENSG00000167978.17	novel	9044	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	145	junction_12	666.872708381197	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGGTCTGTAGACTGTT	-10	True	NA	16	True	AATAAA	-16	NA	2752661	2771410	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_2752855_2756333_2756607_2757471_2757580_2757780_2757946_2758469_2758548_2758984_2759048_2759139_2759173_2759351_2759403_2759568_2759662_2760300_2760500_2761560_2768262_2768996_2769285_2770351_2770466_2770603_2770718_2770857
H1_mix_00033260	chr16	+	854	4	FSM	ENSG00000007038.11	ENST00000574265.1	860	4	0	6	0	-6	multi-exon	FALSE	canonical	2	2	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGATGCCTTGCAGGGCA	217	False	NA	-3	True	AATAAA	-9	NA	2817878	2821689	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2817967_2818682_2818970_2820954_2821110_2821365
H1_mix_00033265	chr16	+	4139	2	FSM	ENSG00000162073.14	ENST00000574988.1	869	2	-1770	-1500	-62	0	multi-exon	FALSE	canonical	3	160	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTTCTGGAACTTCTT	4932	False	NA	9	True	AATAAA	-15	NA	2969207	2973482	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2971379_2971514
H1_mix_00033266	chr16	+	1004	4	FSM	ENSG00000131652.14	ENST00000571057.5	988	4	-16	0	0	0	multi-exon	FALSE	canonical	3	865	junction_3	17.4419672692682	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCACACTATGGACCTTG	-9	True	NA	NA	False	NA	NA	NA	3024026	3026550	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3024366_3025707_3026289_3026364_3026414_3026515
H1_mix_00033272	chr16	+	285	3	FSM	ENSG00000263011.2	ENST00000570700.2	305	3	-11	31	-11	-31	multi-exon	FALSE	canonical	2	3	junction_1	0.5	465	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCCAATAAATCTTCTTT	NA	False	NA	NA	False	NA	NA	NA	3106752	3109548	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3106831_3108248_3108332_3109424
H1_mix_00033273	chr16	+	2250	7	FSM	ENSG00000122386.11	ENST00000414351.5	1006	7	-209	-1035	0	14	multi-exon	FALSE	canonical	2	3	junction_1	23.2067997697993	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTTGTCTCCTGGTGCCC	8	True	NA	34	True	ATTAAA	-30	NA	3112585	3120531	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3112951_3113416_3113488_3115354_3115569_3115828_3115921_3116426_3116548_3118904_3119016_3119255
H1_mix_00033274	chr16	+	942	1	FSM	ENSG00000168124.2	ENST00000304646.2	942	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATCAAGACTGAATCTC	6034	False	NA	NA	False	AAAAAG	-33	NA	3204246	3205188	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3204200_3205200
H1_mix_00033275	chr16	+	4692	7	NIC	ENSG00000162086.16	novel	2859	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_2	23.8047614284762	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCCTGCCTTGCAATGTC	3	True	NA	16	True	AATAAA	-17	NA	3305496	3318574	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_3305644_3308312_3310947_3311752_3311949_3312676_3312769_3313048_3313176_3316911_3317023_3317189
H1_mix_00033279	chr16	+	1965	7	FSM	ENSG00000122390.19	ENST00000572169.6	1950	7	-15	0	3	0	multi-exon	FALSE	canonical	0	0	junction_6	153.995670934824	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCCTGGCACAGGCGGT	2	True	NA	NA	False	NA	NA	NA	3443690	3485878	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3443828_3448470_3448541_3476221_3476338_3479470_3479601_3482501_3482599_3483362_3483598_3484698
H1_mix_00033283	chr16	+	2585	7	NNC	ENSG00000122390.19	novel	2531	7	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	121.4780501435	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCGTCACATCCTGTTTCC	-10	True	NA	14	True	AATAAA	-16	NA	3458023	3486953	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3483362_3483597_3484698_3485062_3485466
H1_mix_00033287	chr16	+	3899	5	FSM	ENSG00000122390.19	ENST00000648681.1	3899	5	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_1	28.1813324738203	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCCCACCCTGCCCCAC	-8	True	NA	-98	True	NA	NA	NA	3458104	3486841	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3483362
H1_mix_00033291	chr16	+	5468	12	NIC	ENSG00000213918.11	novel	2732	12	NA	NA	34	73	intron_retention	TRUE	canonical	2	12	junction_11	6.99704778359777	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGGAGGTGATGCTGAAG	16	True	NA	NA	False	NA	NA	NA	3611761	3657930	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_3612007_3640714_3641238_3642891_3643037_3651316_3655045_3655372_3655521_3655848_3655938_3656101_3656186_3656637_3656754_3656998_3657112_3657186_3657342_3657719_3657817_3657905
H1_mix_00033292	chr16	+	987	8	FSM	ENSG00000213918.11	ENST00000576050.5	965	8	-22	0	-22	0	multi-exon	FALSE	canonical	2	5	junction_1	9.03507902905251	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTGCACAGCCACATGAG	NA	False	NA	NA	False	NA	NA	NA	3642857	3657827	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3643037_3654960_3655045_3655372_3655521_3656101_3656186_3656637_3656754_3656998_3657112_3657186_3657342_3657719
H1_mix_00033294	chr16	+	551	3	FSM	ENSG00000213918.11	ENST00000570520.1	575	3	0	24	0	-24	multi-exon	FALSE	canonical	3	18	junction_2	4	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGCTATCGGCAGCCAGAG	-1	True	NA	NA	False	NA	NA	NA	3654825	3656032	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3655045_3655372_3655521_3655848
H1_mix_00033296	chr16	+	387	1	FSM	ENSG00000277170.1	ENST00000614983.1	479	1	-174	266	-174	-266	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTTGGCCAGGCTGGT	858	False	NA	NA	False	AATAGA	-12	NA	4426727	4427114	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4426700_4427100
H1_mix_00033298	chr16	+	2312	3	FSM	ENSG00000103423.14	ENST00000576180.1	2288	3	-24	0	-24	0	multi-exon	FALSE	canonical	3	91	junction_2	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGTGGTCATTTCTTCT	NA	False	NA	14	True	AAAAAG	-14	NA	4449529	4456772	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4450498_4454810_4454928_4455545
H1_mix_00033299	chr16	+	6405	16	FSM	ENSG00000102858.13	ENST00000415496.5	6405	16	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_15	56.0080946530648	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTCTGCTCCTTCCTCC	-21	True	NA	57	True	AATAAA	-15	NA	4624823	4690974	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4625049_4650364_4650484_4651962_4652052_4652677_4652825_4657245_4657364_4664708_4664776_4665101_4665152_4668264_4668313_4671390_4671460_4673497_4673658_4677462_4677573_4681549_4681777_4682822_4682947_4683223_4683270_4683842_4683933_4686258
H1_mix_00033300	chr16	+	3867	16	NIC	ENSG00000102858.13	novel	3930	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_6	64.662680289501	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGTCTGCTCCTTCCT	-19	True	NA	55	True	AATAAA	-13	NA	4624825	4690972	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_4625049_4650364_4650484_4651962_4652052_4652677_4652825_4657245_4657364_4664708_4664776_4665098_4665152_4668264_4668313_4671390_4671460_4673497_4673658_4677462_4677573_4681549_4681777_4682822_4682947_4683223_4683270_4683842_4683933_4688795
H1_mix_00033301	chr16	+	3840	18	NIC	ENSG00000102858.13	novel	6425	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_16	76.7714443740658	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGTCTGCTCCTTCCT	116	False	NA	55	True	AATAAA	-13	NA	4624960	4690972	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_4625049_4650364_4650484_4651962_4652052_4652677_4652825_4657245_4657364_4664708_4664776_4665101_4665152_4668264_4668313_4671390_4671460_4673497_4673658_4677462_4677573_4680031_4680098_4681549_4681777_4682822_4682947_4683223_4683270_4683842_4683933_4686258_4686304_4688795
H1_mix_00033303	chr16	+	320	4	FSM	ENSG00000267795.6	ENST00000588606.5	394	4	65	9	65	-7	multi-exon	FALSE	canonical	0	0	junction_1	2.16024689946929	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCCAGAGCCTGAGTCTG	46	False	NA	NA	False	NA	NA	NA	4795442	4796272	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4795450_4795714_4795859_4795947_4796034_4796189
H1_mix_00033304	chr16	+	2310	5	FSM	ENSG00000118900.15	ENST00000592120.5	2305	5	-5	0	-5	0	multi-exon	FALSE	canonical	2	5	junction_1	47.087684164758	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTAAAGAAAAGAAGAAAAA	-6	True	NA	NA	False	NA	NA	NA	4846659	4859129	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4848394_4852878_4853167_4857989_4858077_4858567_4858664_4859024
H1_mix_00033307	chr16	+	1785	13	NNC	ENSG00000267072.3	novel	521	2	NA	NA	-22948	-30991	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	5.25198375219624	26	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGGACTTCAGGTAGGA	NA	False	NA	NA	False	NA	NA	NA	4987960	5011259	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_4987994_4988148_4988281_4990766_4990896_4991837_4992031_4996347_4996461_4996854_4997045_5000654_5000744_5000854_5000926_5003401_5003574_5005913_5006049_5007351_5007487_5008420_5008649_5011094
H1_mix_00033308	chr16	+	4272	1	ISM	ENSG00000103184.12	ENST00000251170.12	6445	16	56553	3	55628	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGTTTTTTGTGTGTGTG	NA	False	NA	10	True	NA	NA	NA	5014882	5019154	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_5014900_5019200
H1_mix_00033310	chr16	+	3043	12	FSM	ENSG00000033011.14	ENST00000683772.1	3053	12	10	0	-6	0	multi-exon	FALSE	canonical	3	281	junction_11	22.3136914571812	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCAGTTTGTGGTTCCTG	-18	True	NA	-73	True	NA	NA	NA	5071815	5085487	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_5072058_5072950_5073029_5073152_5073257_5075387_5075537_5077444_5077535_5077906_5078018_5078756_5078879_5079063_5079103_5079747_5079808_5080945_5081057_5082558_5083758_5084749
H1_mix_00033312	chr16	+	1493	3	FSM	ENSG00000078328.23	ENST00000585867.2	1580	3	0	87	0	-87	multi-exon	FALSE	canonical	0	0	junction_1	0	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCAAGAGGTCAGGAGAT	NA	False	NA	NA	False	NA	NA	NA	5239814	5600064	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_5240106_5467215_5467255_5598901
H1_mix_00033314	chr16	+	1579	11	NNC	ENSG00000067365.15	novel	4974	11	NA	NA	4	-5	intron_retention	FALSE	canonical	2	4	junction_1	78.1127390378804	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAGCAACATGCTTGAGA	4	True	NA	12	True	AGTAAA	-13	NA	8621701	8646213	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_8621776_8624027_8624119_8625495_8625799_8628729_8629111_8635167_8635313_8639090_8639163_8641130_8641185_8642126_8642208_8642462_8642566_8644556_8644726_8646107
H1_mix_00033316	chr16	+	767	7	FSM	ENSG00000067365.15	ENST00000572956.5	706	7	-57	-4	0	0	multi-exon	FALSE	canonical	2	3	junction_5	75.7950452792852	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTTGAGATTTTGTCAT	1991	False	NA	21	True	AGTAAA	-22	NA	8635167	8646222	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_8635313_8639090_8639163_8641130_8641185_8642126_8642208_8642462_8642566_8644528_8644726_8646107
H1_mix_00033320	chr16	+	2654	7	FSM	ENSG00000140650.13	ENST00000562318.5	931	7	-47	-1676	-15	402	multi-exon	FALSE	canonical	3	15	junction_2	127.195387757051	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGCTGCTTGAGACCCTC	NA	False	NA	NA	False	NA	NA	NA	8797794	8849727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_8797949_8801798_8801911_8806315_8806408_8811078_8811179_8811637_8811714_8812990_8813107_8847723
H1_mix_00033325	chr16	+	309	1	FSM	ENSG00000263179.1	ENST00000571636.1	900	1	490	101	490	-101	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGGGGGATGACCAGCTG	-6	True	NA	NA	False	AATGAA	-1	NA	11243142	11243451	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_11243100_11243500
H1_mix_00033326	chr16	+	2286	1	FSM	ENSG00000262420.3	ENST00000572811.1	2597	1	105	206	105	-206	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTTGTGTTATTATTA	NA	False	NA	NA	False	NA	NA	NA	11742014	11744300	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_11742000_11744300
H1_mix_00033327	chr16	+	1134	8	FSM	ENSG00000048471.14	ENST00000564111.5	2248	8	33	1081	33	335	multi-exon	FALSE	canonical	3	8	junction_6	3.32584192194938	2452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCGGAGTCGCCCGAGAAG	39	False	NA	NA	False	NA	NA	NA	11976777	12052203	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_11976814_11999296_11999359_12002990_12003044_12027319_12027445_12042896_12043078_12046383_12046455_12048371_12048621_12051846
H1_mix_00033328	chr16	+	2076	6	FSM	ENSG00000175595.16	ENST00000575156.5	2073	6	-3	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	5.57135531087365	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGAATATCCTTTTTAA	-16	True	NA	NA	False	AATAAA	-17	NA	13920153	13933247	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_13920373_13922030_13922212_13926560_13926757_13928027_13928236_13930709_13930891_13932156
H1_mix_00033329	chr16	+	1278	7	FSM	ENSG00000175595.16	ENST00000682552.1	1254	7	-24	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	5.25991127935317	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTAATTAGCTCTTTAA	-16	True	NA	NA	False	AAAAAG	-42	NA	13920153	13934355	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_13920373_13922030_13922212_13926560_13926757_13928027_13928236_13930709_13930891_13932156_13932286_13934191
H1_mix_00033332	chr16	+	2286	10	NIC	ENSG00000186260.17	novel	8804	17	NA	NA	2	-24	intron_retention	FALSE	canonical	2	18	junction_1	22.3330569358242	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACGTAATAAAGAAAATTTC	7966	False	NA	-15	True	NA	NA	NA	14079289	14241401	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_14079355_14092720_14092883_14140543_14140761_14210242_14210309_14212353_14212410_14213544_14213621_14217125_14217288_14218819_14218999_14234145_14234284_14240236
H1_mix_00033333	chr16	+	8606	16	FSM	ENSG00000186260.17	ENST00000318282.9	8608	16	2	0	2	0	multi-exon	FALSE	canonical	2	8	junction_11	20.828399415755	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATGATTCTTGCTGTGCA	7966	False	NA	14	True	AATAAA	-15	NA	14079289	14266772	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_14079355_14140543_14140761_14210242_14210309_14212353_14212410_14213544_14213621_14217125_14217288_14218819_14218999_14234145_14234284_14240236_14240485_14245527_14245661_14246472_14247358_14248925_14249082_14251861_14252024_14252364_14252503_14258100_14258162_14260908
H1_mix_00033334	chr16	+	629	1	FSM	ENSG00000262470.2	ENST00000571473.2	623	1	-18	12	-18	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	281	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTGAAGAGAGAAAGCTTA	-5	True	NA	NA	False	AAAACA	-18	NA	14200338	14200967	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_14200300_14201000
H1_mix_00033335	chr16	+	976	2	Genic_Genomic	ENSG00000262454.4	novel	5365	2	NA	NA	8483	-47	multi-exon	TRUE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTTGAAGCTTTTCACA	8774	False	NA	-32	True	NA	NA	NA	14311174	14331020	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr16_+_14311855_14330724
H1_mix_00033336	chr16	+	1194	3	FSM	ENSG00000103429.11	ENST00000566520.5	1177	3	-17	0	-17	0	multi-exon	TRUE	canonical	3	27	junction_2	137	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGGACGTTTGATATAAA	-21	True	NA	-18	True	NA	NA	NA	14632913	14650556	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_14633019_14644273_14644610_14649803
H1_mix_00033337	chr16	+	2001	7	NNC	ENSG00000224712.12	novel	1155	8	NA	NA	4255	-21	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_6	63.846169292553	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAATGAATACTGCAGT	NA	False	NA	NA	False	AATAAA	-14	NA	14715943	14726317	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_14716197_14719826_14719927_14720089_14720235_14723191_14723300_14724317_14724379_14724487_14724524_14725019
H1_mix_00033338	chr16	+	728	7	ISM	ENSG00000254852.8	ENST00000553201.1	1053	8	4255	386	4255	-386	3prime_fragment	FALSE	canonical	3	28	junction_6	61.8753226703147	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATTCTTCAGGATTGCCC	NA	False	NA	NA	False	NA	NA	NA	14755067	14765027	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_14755321_14758946_14759047_14759209_14759355_14762311_14762420_14763437_14763499_14763607_14763644_14765002
H1_mix_00033339	chr16	+	567	4	FSM	ENSG00000103512.16	ENST00000566917.1	592	4	25	0	25	0	multi-exon	FALSE	canonical	3	1680	junction_3	118.766811675466	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGACATACACCATCCATGC	NA	False	NA	NA	False	AAAACA	-40	NA	14853280	14857551	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_14853605_14853936_14854027_14857216_14857323_14857504
H1_mix_00033340	chr16	+	609	1	NIC	ENSG00000183458.14	novel	6919	32	NA	NA	229	-9699	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGACCGTGAGGCTGGAG	300	False	NA	NA	False	NA	NA	NA	14911779	14912388	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_14911800_14912400
H1_mix_00033342	chr16	+	3191	20	NNC	ENSG00000183426.17	novel	2747	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	63	junction_3	101.338329686807	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATACTGCAGTCCTTATG	NA	False	NA	NA	False	AATAAA	-21	NA	14927282	14952056	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_14927360_14928380_14928526_14929250_14929422_14929519_14929714_14930165_14930323_14930502_14930756_14930879_14931076_14932570_14932742_14932827_14932972_14933065_14933277_14933366_14933494_14935159_14935398_14937564_14937651_14941811_14941941_14945573_14945674_14945836_14945982_14948929_14949038_14950049_14950111_14950219_14950256_14951614
H1_mix_00033343	chr16	+	3713	20	NNC	ENSG00000183426.17	novel	2747	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	26	junction_18	108.33489167144	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATACTGCAGTCCTTATG	NA	False	NA	NA	False	AATAAA	-21	NA	14927282	14952056	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_14927360_14928380_14928526_14929250_14929422_14929519_14930323_14930502_14930756_14930879_14931076_14932570_14932742_14932827_14932972_14933065_14933277_14933366_14933494_14935159_14935398_14937564_14937651_14941811_14941941_14945573_14945674_14945836_14945982_14948929_14949038_14950049_14950111_14950219_14950256_14950751_14950822_14951614
H1_mix_00033345	chr16	+	3882	23	NIC	ENSG00000179889.20	novel	4598	23	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	150.492195234325	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGTGAATTCAGTTTATAA	19	False	NA	18	True	AATAAA	-18	NA	14975092	15037687	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_14975221_14997756_14997827_14998339_14998406_15001775_15001857_15004186_15004334_15006393_15006584_15008778_15008848_15009680_15009760_15016128_15016214_15017119_15017169_15017320_15017423_15018839_15018966_15022703_15022755_15026642_15026707_15028877_15028967_15029950_15030057_15031734_15031907_15032860_15032980_15033277_15033400_15034285_15034379_15034456_15034554_15035448_15035554_15036015
H1_mix_00033347	chr16	+	865	5	FSM	ENSG00000166780.11	ENST00000564389.5	865	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	84.0873801470827	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAAGTTTTTACTTTT	NA	False	NA	11	True	AATAAA	-23	NA	15515304	15587964	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_15515429_15567982_15568057_15581216_15581332_15583155_15583239_15587495
H1_mix_00033349	chr16	+	3650	9	NIC	ENSG00000072864.16	novel	2550	11	NA	NA	1314	1423	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	18.6480561989715	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGAACTTGTTGGGCTTC	1328	False	NA	26	True	AATAAA	-16	NA	15651576	15701914	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_15652051_15664735_15664862_15667285_15667440_15677800_15677950_15687374_15687512_15691143_15691324_15694164_15694257_15696708_15696861_15699728
H1_mix_00033350	chr16	+	843	5	FSM	ENSG00000072864.16	ENST00000574109.5	843	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	23.9478600296561	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCATAGTTAGTTAGCTTT	4903	False	NA	NA	False	NA	NA	NA	15687426	15699930	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_15687512_15691143_15691324_15694164_15694257_15696708_15696861_15699596
H1_mix_00033352	chr16	+	1131	4	FSM	ENSG00000072864.16	ENST00000576502.5	1131	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	15.1730755689881	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGCTGGAGTGTAGTGG	817	False	NA	NA	False	NA	NA	NA	15691199	15700491	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_15691324_15694164_15694257_15696708_15696861_15699728
H1_mix_00033354	chr16	+	6381	30	FSM	ENSG00000103222.20	ENST00000572882.3	6387	30	0	6	0	-6	multi-exon	FALSE	canonical	3	20	junction_16	47.772175345253	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAAAGAATGGTTCCCTTT	19	False	NA	31	True	AGTAAA	-34	NA	15949576	16143068	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_15949800_16007815_16007993_16009775_16009902_16014490_16014629_16016495_16016622_16033108_16033171_16036471_16036604_16044449_16044681_16045835_16046014_16048141_16048304_16052723_16052817_16056091_16056296_16068155_16068303_16071641_16071730_16076325_16076402_16079351_16079479_16086823_16086992_16090404_16090589_16102626_16102718_16106737_16106874_16111374_16111583_16114765_16115077_16121974_16122175_16124788_16124916_16125809_16125912_16131788_16131936_16134349_16134509_16136477_16136645_16138363_16138559_16141172
H1_mix_00033356	chr16	+	6613	30	NIC	ENSG00000103222.20	novel	6504	31	NA	NA	-196	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_4	44.6329194986464	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTATTTCTTTCTAA	NA	False	NA	16	True	AGTAAA	-19	NA	15949380	16143053	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_15949800_16007815_16007993_16009775_16009902_16014490_16014629_16033108_16033171_16036471_16036604_16044449_16044681_16045835_16046014_16048141_16048304_16052723_16052817_16056091_16056296_16068155_16068303_16071641_16071730_16076325_16076402_16079351_16079479_16083365_16083543_16086823_16086992_16090404_16090589_16102626_16102718_16106737_16106874_16111374_16111583_16114765_16115077_16121974_16122175_16124788_16124916_16125809_16125912_16131788_16131936_16134349_16134509_16136477_16136645_16138363_16138559_16141172
H1_mix_00033358	chr16	+	3774	23	FSM	ENSG00000103226.19	ENST00000574894.2	3757	23	-17	0	8	0	multi-exon	FALSE	canonical	3	659	junction_12	438.228826222365	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAGGCCCTGTCTCAGAA	14	False	NA	NA	False	NA	NA	NA	16232537	16278371	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_16232832_16236900_16236991_16239850_16239897_16243160_16243262_16245067_16245175_16247394_16247468_16250927_16251081_16251962_16252101_16252432_16252523_16255719_16255826_16256007_16256159_16261501_16261677_16263073_16263216_16263512_16263645_16265042_16265180_16267043_16267132_16270120_16270185_16270732_16270829_16273688_16273908_16273992_16274076_16275011_16275172_16275316_16275444_16277369
H1_mix_00033359	chr16	+	4015	32	FSM	ENSG00000103226.19	ENST00000677777.1	3998	32	-17	0	8	0	multi-exon	FALSE	canonical	3	30	junction_31	481.443171698844	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGTTGTAGCTCATCA	14	False	NA	NA	False	AATAAA	-12	NA	16232537	16294794	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_16232832_16236900_16236991_16239850_16239897_16243160_16243262_16245067_16245175_16247394_16247468_16250927_16251081_16251962_16252101_16252432_16252523_16255719_16255826_16256007_16256159_16261501_16261677_16263073_16263216_16263512_16263645_16265042_16265180_16267043_16267132_16270120_16270185_16270732_16270829_16273688_16273908_16273992_16274076_16275011_16275172_16275316_16275444_16277369_16277484_16278661_16278790_16280188_16280331_16281238_16281323_16283015_16283127_16285404_16285507_16287742_16287863_16293651_16293745_16294167_16294349_16294626
H1_mix_00033361	chr16	+	1898	3	FSM	ENSG00000103226.19	ENST00000573635.1	1898	3	0	0	0	0	multi-exon	FALSE	canonical	3	1708	junction_2	76.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATAGATGTATTTCTTGG	NA	False	NA	NA	False	AATAAA	-28	NA	16286700	16294810	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_16287863_16293651_16293745_16294167
H1_mix_00033362	chr16	+	7593	36	NNC	ENSG00000244257.5	novel	6805	32	NA	NA	-238	15965	intron_retention	TRUE	canonical	3	97	junction_21	93.9806580187256	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGAAACTTTAAAAAACAGG	NA	False	NA	NA	False	NA	NA	NA	16310102	16350155	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_16310563_16316190_16316263_16316383_16316456_16316723_16316894_16317105_16317778_16317895_16318080_16318513_16318735_16318922_16319039_16319448_16319576_16319930_16320179_16320651_16321408_16322305_16322438_16322627_16322804_16323155_16323290_16324383_16324528_16324654_16324935_16325027_16325242_16325307_16325468_16325857_16326011_16326864_16327010_16327735_16327907_16328004_16328808_16328987_16329241_16329364_16329561_16331057_16331229_16331314_16331459_16331552_16331764_16331853_16331981_16333646_16333885_16340305_16340435_16344044_16344145_16344307_16344453_16347402_16347511_16348526_16348588_16348696_16348733_16350091
H1_mix_00033365	chr16	+	1540	6	ISM	ENSG00000227827.3	ENST00000532739.1	9932	31	3265	14240	3265	-14240	internal_fragment	FALSE	canonical	3	46	junction_1	20.7016907522067	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCACACCTACGCTGCCCC	NA	False	NA	NA	False	NA	NA	NA	16359488	16363267	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_16359605_16359959_16360208_16360680_16361437_16362335_16362468_16362646_16362823_16363155
H1_mix_00033366	chr16	+	530	2	ISM	ENSG00000227827.3	ENST00000532739.1	9932	31	10820	9715	10820	-9715	internal_fragment	FALSE	canonical	3	8	junction_1	0	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTACTGTTTTCCGTGTTT	NA	False	NA	NA	False	NA	NA	NA	16367043	16367792	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_16367369_16367587
H1_mix_00033367	chr16	+	614	3	NNC	ENSG00000227827.3	novel	9932	31	NA	NA	11542	-8317	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	81.5	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCACCACCAAGGTGCACT	NA	False	NA	NA	False	GGGGCT	-35	NA	16367765	16369190	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_16367988_16368671_16368816_16368942
H1_mix_00033368	chr16	+	2215	14	Fusion	ENSG00000227827.3_ENSG00000214967.5	novel	9932	31	NA	NA	-7195	-1594	multi-exon	TRUE	non_canonical	0	0	junction_7	76.6283584937312	750	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCCTACAAGCATCACAGT	NA	False	NA	NA	False	NA	NA	NA	16371859	16392214	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr16_+_16372107_16372286_16372540_16372663_16372860_16374350_16374522_16374607_16374752_16374845_16375057_16375146_16375274_16376887_16377057_16383663_16383793_16387398_16387499_16387661_16387807_16390766_16390875_16391890_16391952_16392060
H1_mix_00033369	chr16	+	355	1	Intergenic	novelGene_504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCGTCTCTACTAAAAATAC	NA	False	NA	NA	False	NA	NA	NA	16376161	16376516	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_16376200_16376500
H1_mix_00033370	chr16	+	737	4	NIC	ENSG00000214967.5	novel	561	5	NA	NA	0	-320	intron_retention	FALSE	canonical	3	71	junction_3	84.0119039184329	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGATTGCCCTACTGGCC	NA	False	NA	NA	False	NA	NA	NA	16390833	16393488	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_16390875_16391890_16391952_16392060_16392663_16393455
H1_mix_00033371	chr16	+	507	1	FSM	ENSG00000279729.1	ENST00000624772.1	1561	1	1039	15	1039	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGTGGATGCCTAGAAA	NA	False	NA	NA	False	NA	NA	NA	16761943	16762450	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_16761900_16762400
H1_mix_00033372	chr16	+	2896	11	FSM	ENSG00000256340.9	ENST00000546162.6	2943	11	14	33	14	-33	multi-exon	FALSE	canonical	1	1	junction_2	12.2865780427261	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGCTCGTTGCAATAAAT	NA	False	NA	7	True	AATAAA	-19	NA	18571201	18598295	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_18571312_18572876_18573061_18574319_18574436_18574760_18574887_18575025_18575155_18580209_18580336_18582405_18582468_18585805_18585938_18591103_18591308_18592538_18592717_18596766
H1_mix_00033373	chr16	+	2267	15	FSM	ENSG00000170537.13	ENST00000569532.5	2738	15	0	471	0	-471	multi-exon	FALSE	canonical	3	50	junction_12	9.89562880203957	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGGACATTTACCCAGGAC	0	True	NA	NA	False	NA	NA	NA	18983933	19059525	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_18984131_19009171_19009416_19016449_19016599_19021628_19021797_19023112_19023196_19030223_19030370_19035675_19035824_19037873_19038048_19040288_19040447_19044883_19045002_19045340_19045439_19047062_19047250_19051685_19051817_19056541_19056698_19059415
H1_mix_00033376	chr16	+	1033	1	FSM	ENSG00000261357.1	ENST00000565802.1	704	1	-327	-2	-327	2	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGCATCTTTGATTTTTGC	NA	False	NA	4	True	ATTAAA	-20	NA	19065663	19066696	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_19065700_19066700
H1_mix_00033377	chr16	+	7666	1	FSM	ENSG00000205730.7	ENST00000381440.5	7666	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTGGACTGAATGTCAGA	-23	True	NA	15	True	AATAAA	-15	NA	19113963	19121629	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_19114000_19121600
H1_mix_00033378	chr16	+	604	5	FSM	ENSG00000103528.17	ENST00000570264.5	580	5	-24	0	-24	0	multi-exon	FALSE	canonical	2	2	junction_1	22.3983816379666	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGTGCTCAGACGGACC	NA	False	NA	NA	False	NA	NA	NA	19167946	19183617	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_19168145_19172759_19172778_19173429_19173579_19180390_19180540_19183527
H1_mix_00033380	chr16	+	5308	13	NIC	ENSG00000103540.16	novel	5549	15	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	28.2498770892115	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTTTGATTGTTTTTAT	-29	True	NA	NA	False	AATAAA	-20	NA	19523848	19553408	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_19524089_19527866_19528023_19532415_19532545_19535939_19537588_19540656_19540788_19541886_19542065_19542620_19542761_19542877_19542995_19544796_19544899_19545093_19545211_19545816_19545891_19546411_19546475_19551195
H1_mix_00033381	chr16	+	5548	16	NIC	ENSG00000103540.16	novel	5549	15	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_14	27.1452062475536	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAATCTAGTTTGATT	12	True	NA	NA	False	AATAAA	-12	NA	19523889	19553400	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_19524089_19525718_19525862_19527866_19528023_19532415_19532545_19535939_19537588_19540656_19540788_19541886_19542065_19542620_19542761_19542877_19542995_19544796_19544899_19545093_19545211_19545816_19545891_19546411_19546475_19547954_19548015_19548514_19548601_19551195
H1_mix_00033382	chr16	+	5278	14	NIC	ENSG00000103540.16	novel	5549	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_13	18.3873509390617	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTTTGATTGTTTTTAT	0	True	NA	NA	False	AATAAA	-20	NA	19523938	19553408	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_19524089_19527866_19528023_19532415_19532545_19535939_19537588_19540656_19540788_19541886_19542065_19542620_19542761_19542877_19542995_19544796_19544899_19545093_19545211_19545816_19545891_19546411_19546475_19547954_19548015_19551195
H1_mix_00033383	chr16	+	1465	3	FSM	ENSG00000103540.16	ENST00000562616.1	1679	3	214	0	214	0	multi-exon	FALSE	canonical	3	24	junction_1	14.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAATTTAATTCATCTCT	9592	False	NA	NA	False	TATAAA	-13	NA	19547062	19551622	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_19548015_19548514_19548601_19551195
H1_mix_00033385	chr16	+	3139	28	FSM	ENSG00000103544.16	ENST00000542263.5	3138	28	-1	0	0	0	multi-exon	FALSE	canonical	2	3	junction_22	93.2972740454257	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCAGTCTCTGTGTTGTCT	0	True	NA	17	True	ATTAAA	-18	NA	19555414	19700687	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_19555747_19564850_19564951_19569423_19569592_19573118_19573242_19575097_19575123_19579051_19579129_19581524_19581654_19591789_19591875_19601663_19601724_19608177_19608275_19608973_19609022_19610321_19610416_19626176_19626224_19627693_19627806_19628636_19628754_19629766_19629821_19633091_19633173_19637593_19637657_19640014_19640101_19642395_19642477_19644885_19644950_19647783_19647883_19651975_19652091_19669159_19669300_19682224_19682391_19691352_19691472_19699501_19699649_19700377
H1_mix_00033389	chr16	+	1919	7	FSM	ENSG00000174628.16	ENST00000568300.6	1915	7	-4	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	26.9814751264641	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCCTTAGCTCTTCATC	-14	True	NA	6	True	AATAAA	-20	NA	19718278	19857539	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_19718488_19730429_19730495_19733697_19733828_19763847_19764113_19788837_19788923_19827025_19827138_19856486
H1_mix_00033391	chr16	+	1382	9	FSM	ENSG00000005187.12	ENST00000440284.6	1517	9	0	135	0	27	multi-exon	FALSE	canonical	3	19	junction_8	4.18143217091943	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATGTTTAACAACCCAAT	-11	True	NA	NA	False	NA	NA	NA	20764039	20786179	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_20764126_20769983_20770254_20775838_20776050_20777372_20777581_20780713_20780858_20780973_20781131_20781707_20781788_20784983_20785108_20786077
H1_mix_00033393	chr16	+	2604	19	FSM	ENSG00000005189.20	ENST00000348433.10	2604	19	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_15	10.2083238851052	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGGGATGTCCACAGAT	-6	True	NA	11	True	AATAAA	-20	NA	20806520	20849665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_20806706_20806951_20807092_20813189_20813303_20814926_20815054_20816115_20816213_20821761_20821903_20824438_20824528_20825832_20825949_20827057_20827197_20827352_20827448_20828434_20828538_20832155_20832260_20833002_20833124_20839754_20839860_20840330_20840469_20844628_20844846_20845053_20845242_20846220_20846340_20849398
H1_mix_00033394	chr16	+	1606	5	FSM	ENSG00000102897.10	ENST00000568663.5	857	5	-10	-739	-10	-2	multi-exon	FALSE	canonical	2	4	junction_1	68.854919940408	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATTTTTGTCTGTCTATT	5	True	NA	7	True	AATAAA	-13	NA	20899891	20925002	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_20900005_20900297_20900536_20915555_20915715_20920121_20920215_20923999
H1_mix_00033398	chr16	+	2415	6	NNC	ENSG00000197006.15	novel	3153	5	NA	NA	-87	-1	at_least_one_novel_splicesite	FALSE	canonical	2	81	junction_5	355.475231204651	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTCGTGTAAGTGCTTC	680	False	NA	12	True	AATAAA	-18	NA	21599470	21657470	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_21599899_21612644_21612836_21617864_21618075_21624930_21625116_21655226_21655842_21656684
H1_mix_00033401	chr16	+	865	1	FSM	ENSG00000261596.2	ENST00000564271.2	828	1	-86	49	-86	-49	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAGAGAAGGATAATTATA	NA	False	NA	-47	True	NA	NA	NA	21626655	21627520	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_21626700_21627500
H1_mix_00033402	chr16	+	5259	1	FSM	ENSG00000197006.15	ENST00000564733.1	5603	1	344	0	344	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTCGTGTAAGTGCTTCA	6510	False	NA	13	True	AATAAA	-19	NA	21652212	21657471	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_21652200_21657500
H1_mix_00033403	chr16	+	376	2	Antisense	novelGene_ENSG00000185864.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGAGTGTGGAAGGGGA	NA	False	NA	NA	False	NA	NA	NA	21834938	21835944	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr16_+_21835146_21835775
H1_mix_00033404	chr16	+	299	2	Antisense	novelGene_ENSG00000185864.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	42	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTAGGGCCAAAGGAGGGA	NA	False	NA	NA	False	NA	NA	NA	21837388	21837744	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr16_+_21837477_21837533
H1_mix_00033405	chr16	+	299	2	Antisense	novelGene_ENSG00000185864.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	533	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTAGGGCCAAAGGAGGGA	NA	False	NA	NA	False	NA	NA	NA	21837388	21837744	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr16_+_21837534_21837590
H1_mix_00033406	chr16	+	645	2	Antisense	novelGene_ENSG00000185710.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAAAAATAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	21893285	21894271	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr16_+_21893758_21894098
H1_mix_00033407	chr16	+	885	2	FSM	ENSG00000185716.12	ENST00000562695.1	695	2	-190	0	-18	0	multi-exon	FALSE	canonical	3	21	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATACATAAAAATATAAAT	-24	True	NA	NA	False	AATAAA	-15	NA	22008092	22076056	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_22008408_22075486
H1_mix_00033408	chr16	+	448	3	FSM	ENSG00000058600.16	ENST00000563282.1	448	3	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_1	57.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGACAATAGTAGCAAACTA	NA	False	NA	NA	False	NA	NA	NA	22328318	22333696	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_22328588_22332059_22332186_22333643
H1_mix_00033412	chr16	+	1536	6	FSM	ENSG00000237296.10	ENST00000337787.3	1589	6	53	0	53	0	multi-exon	FALSE	canonical	3	46	junction_1	36.4779385382453	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAATATAGGGTTAATTTG	NA	False	NA	NA	False	TTTAAA	-4	NA	22451619	22466618	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_22451659_22454701_22454866_22459354_22459492_22460786_22460843_22462120_22462335_22465692
H1_mix_00033413	chr16	+	3866	28	NNC	ENSG00000243716.11	novel	5708	23	NA	NA	-10072	-75	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	290.463689653042	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATTCTTCAGGATTGCCC	5473	False	NA	NA	False	NA	NA	NA	22469048	22533650	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_22469196_22471627_22471853_22474124_22474227_22474948_22475219_22478690_22478822_22478975_22479132_22480263_22480383_22480853_22480942_22481030_22481133_22481751_22481893_22482443_22482644_22483030_22483228_22483395_22483561_22484661_22484817_22485829_22485973_22486120_22486323_22489205_22489316_22490294_22490443_22490816_22490977_22491706_22491826_22513519_22513601_22513763_22513922_22523819_22523949_22527565_22527666_22527777_22527974_22532059_22532121_22532229_22532266_22533625
H1_mix_00033415	chr16	+	597	4	FSM	ENSG00000243716.11	ENST00000541154.5	597	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	127.50947677199	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTACCTTTGGGTGAGT	NA	False	NA	NA	False	TATAAA	-20	NA	22507173	22523934	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_22507400_22513423_22513522_22513763_22513922_22523819
H1_mix_00033424	chr16	+	2317	2	FSM	ENSG00000122254.7	ENST00000261374.4	2329	2	12	0	12	0	multi-exon	FALSE	canonical	1	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGGCTTTTCTCTGTAA	9	True	NA	37	True	AATAAA	-23	NA	22814173	22916338	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_22815096_22914943
H1_mix_00033425	chr16	+	390	2	FSM	ENSG00000168447.11	ENST00000566870.1	560	2	0	170	0	161	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGGTCCCTGGGCACA	NA	False	NA	NA	False	NA	NA	NA	23348794	23353074	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_23348911_23352800
H1_mix_00033428	chr16	+	540	2	FSM	ENSG00000166851.15	ENST00000562407.1	540	2	0	0	0	0	multi-exon	FALSE	canonical	3	1645	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACCTCGATGTGCCACCT	2899	False	NA	NA	False	NA	NA	NA	23683901	23687820	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_23684090_23687468
H1_mix_00033429	chr16	+	683	4	FSM	ENSG00000166851.15	ENST00000564794.1	683	4	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_3	746.056744937452	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAACCGTCTCAAGGCCT	3676	False	NA	NA	False	NA	NA	NA	23688675	23690038	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_23688746_23689237_23689393_23689493_23689773_23689859
H1_mix_00033431	chr16	+	6767	17	FSM	ENSG00000122257.20	ENST00000348022.6	5739	17	-1031	3	-4	0	multi-exon	FALSE	canonical	3	33	junction_15	32.4604928143428	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTGAGTATTTGCATT	5	True	NA	10	True	AATAAA	-20	NA	24539551	24572860	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_24540793_24546162_24546263_24548944_24548982_24553512_24553558_24555614_24555704_24555820_24555918_24556307_24556448_24559504_24559678_24561611_24561716_24561823_24562162_24563198_24563296_24563422_24563502_24563609_24563665_24564796_24564866_24567142_24567506_24568744_24570500_24570875
H1_mix_00033435	chr16	+	8571	24	NIC	ENSG00000090905.19	novel	8303	24	NA	NA	-276	0	combination_of_known_junctions	TRUE	canonical	3	10	junction_5	88.7072456191196	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAGTGGTTTGGATCTT	12	False	NA	26	True	AATAAA	-19	NA	24729374	24826221	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_24729847_24730252_24730301_24750725_24750814_24758338_24758361_24776932_24777359_24778343_24778469_24789231_24791818_24794543_24794720_24795906_24795940_24797489_24797571_24797914_24797967_24804176_24804320_24805013_24805152_24805604_24805734_24806205_24806284_24806573_24806785_24809349_24809482_24815146_24815306_24816815_24816957_24818592_24818701_24820138_24820361_24822076_24822148_24822873_24823014_24823431
H1_mix_00033442	chr16	+	3214	2	FSM	ENSG00000182601.7	ENST00000331351.6	3267	2	53	0	53	0	multi-exon	FALSE	canonical	0	0	junction_1	0	237	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGAGTTTCGATGGTGT	20	True	NA	22	True	TATAAA	-17	NA	25692011	26137685	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_25693152_26135611
H1_mix_00033444	chr16	+	284	1	FSM	ENSG00000245888.7	ENST00000661766.1	1315	1	22	1009	3	-1009	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAGTAATCCCAGCACTT	NA	False	NA	NA	False	NA	NA	NA	27268871	27269155	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_27268900_27269200
H1_mix_00033448	chr16	+	4942	6	NNC	ENSG00000188322.8	novel	4986	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	308.069732365904	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGGGTGGCTGTCTTTT	11	True	NA	19	True	AATAAA	-20	NA	28292524	28323849	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_28293301_28317384_28317618_28318994_28319198_28320075_28321183_28321202_28322918_28322941
H1_mix_00033450	chr16	+	4243	5	NNC	ENSG00000188322.8	novel	4986	4	NA	NA	711	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	275.076807455663	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGGGTGGCTGTCTTTT	247	False	NA	19	True	AATAAA	-20	NA	28293235	28323849	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_28293301_28317384_28317618_28318994_28319198_28320075_28322918_28322949
H1_mix_00033451	chr16	+	726	4	FSM	ENSG00000176476.9	ENST00000567447.1	726	4	0	0	0	0	multi-exon	TRUE	canonical	3	123	junction_3	6.59966329107444	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTCTCCTGGGTTTTACT	NA	False	NA	22	True	ATTAAA	-16	NA	28590116	28591790	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28590443_28590630_28590667_28590772_28590936_28591589
H1_mix_00033452	chr16	+	213	1	Intergenic	novelGene_518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGACACCATATTCTGGAA	NA	False	NA	NA	False	NA	NA	NA	28768727	28768940	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_28768700_28768900
H1_mix_00033453	chr16	+	4508	23	NIC	ENSG00000168488.19	novel	3981	24	NA	NA	-312	0	intron_retention	FALSE	canonical	3	21	junction_9	184.179798965868	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGAGTTTCCTCCT	-26	True	NA	24	True	AATAAA	-31	NA	28822686	28837237	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_28823559_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830984_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836486_28836727
H1_mix_00033454	chr16	+	3516	23	FSM	ENSG00000168488.19	ENST00000564304.5	3514	23	-2	0	0	0	multi-exon	TRUE	canonical	3	23	junction_22	199.620321428638	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGGAGGGGCCTCACAGA	28	True	NA	NA	False	NA	NA	NA	28823092	28836919	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28823559_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832186_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836177_28836727
H1_mix_00033455	chr16	+	3981	24	FSM	ENSG00000168488.19	ENST00000395547.6	3981	24	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_22	196.376706775735	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGAGTTTCCTCCT	28	True	NA	24	True	AATAAA	-31	NA	28823092	28837237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28823559_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836177_28836325_28836491_28836727
H1_mix_00033456	chr16	+	4708	20	NIC	ENSG00000168488.19	novel	3264	15	NA	NA	-79	0	intron_retention	FALSE	canonical	3	187	junction_1	125.54296480122	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGAGTTTCCTCCT	553	False	NA	24	True	AATAAA	-31	NA	28824058	28837237	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_28824543_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277
H1_mix_00033458	chr16	+	3821	24	NIC	ENSG00000168488.19	novel	3264	15	NA	NA	-105	0	combination_of_known_junctions	FALSE	canonical	3	108	junction_22	183.337809420067	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAATTTTAAACTAACTT	527	False	NA	2	True	AATAAA	-9	NA	28824032	28837215	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_28824543_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836123_28836448_28836486_28836727
H1_mix_00033459	chr16	+	3434	23	NIC	ENSG00000168488.19	novel	3635	23	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	140	junction_21	157.558155339702	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAATTTTAAACTAACTT	752	False	NA	2	True	AATAAA	-9	NA	28825365	28837215	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836123_28836325_28836486_28836727
H1_mix_00033463	chr16	+	3335	15	NIC	ENSG00000168488.19	novel	4456	22	NA	NA	110	0	intron_retention	FALSE	canonical	3	61	junction_13	176.25325297331	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAACCTGCCTGGAGTTTC	2943	False	NA	19	True	AATAAA	-26	NA	28829887	28837232	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835545_28835759_28835932
H1_mix_00033465	chr16	+	3006	19	ISM	ENSG00000196296.14	ENST00000357084.7	3532	22	2390	160	742	-160	3prime_fragment	TRUE	canonical	2	7	junction_14	3.1446603773522	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTTTATAAACATGTCCC	752	False	NA	NA	False	NA	NA	NA	28880794	28904304	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_28881020_28882450_28882590_28884574_28884656_28887188_28887275_28887424_28887723_28888786_28888954_28894154_28894244_28894504_28894608_28894821_28894954_28897999_28898126_28898232_28898452_28900580_28900917_28901862_28902084_28902183_28902387_28902579_28902666_28902777_28902912_28903029_28903148_28903322_28903441_28904179
H1_mix_00033466	chr16	+	638	4	FSM	ENSG00000176953.13	ENST00000562977.1	638	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	114.300772817452	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCACAGAGACGTCCCAAC	8	True	NA	NA	False	NA	NA	NA	28951006	28959018	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28951399_28952131_28952205_28958716_28958862_28958990
H1_mix_00033467	chr16	+	812	5	FSM	ENSG00000169682.18	ENST00000567771.5	829	5	17	0	17	0	multi-exon	FALSE	canonical	2	6	junction_1	272.470640620233	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGCCGACCAGCGGAG	NA	False	NA	NA	False	NA	NA	NA	28974237	28979244	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_28974465_28975100_28975393_28975491_28975558_28977907_28978045_28979154
H1_mix_00033472	chr16	+	245	3	ISM	ENSG00000284671.1	ENST00000566038.1	1611	15	9620	17891	9620	-17891	internal_fragment	FALSE	canonical	2	13	junction_2	36	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTGAGTATACTTTTCC	9662	False	NA	NA	False	NA	NA	NA	29084641	29086271	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_29084769_29085216_29085277_29086213
H1_mix_00033473	chr16	+	519	4	ISM	ENSG00000284671.1	ENST00000566038.1	1611	15	21158	2033	21158	-2033	internal_fragment	TRUE	canonical	3	33	junction_2	17.5562587763516	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGAAGAGGTAGGTACTT	777	False	NA	NA	False	NA	NA	NA	29096179	29102129	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_29096262_29097131_29097317_29099104_29099214_29101986
H1_mix_00033474	chr16	+	3836	6	NIC	ENSG00000213648.11	novel	1356	8	NA	NA	-1182	0	intron_retention	FALSE	canonical	3	17	junction_2	86.9758587195321	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTCATGTAGAGCCT	2293	False	NA	11	True	AATAAA	-19	NA	29458730	29464966	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_29461534_29461637_29461764_29463344_29463472_29463566_29463662_29464159_29464341_29464462
H1_mix_00033476	chr16	+	1372	6	NIC	ENSG00000213648.11	novel	1356	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	215	junction_1	13.5941163743731	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTCATGTAGAGCCT	1497	False	NA	11	True	AATAAA	-19	NA	29461381	29464966	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_29461534_29461637_29461951_29463344_29463472_29463566_29463662_29464159_29464341_29464462
H1_mix_00033477	chr16	+	771	1	FSM	ENSG00000279228.2	ENST00000624430.1	418	1	-387	34	-387	-34	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTGTCTCTAAAAAAATAAA	5337	False	NA	NA	False	NA	NA	NA	29466773	29467544	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29466800_29467500
H1_mix_00033480	chr16	+	2259	3	ISM	ENSG00000103485.19	ENST00000395384.9	2200	4	0	12	0	-12	intron_retention	FALSE	canonical	3	610	junction_2	18	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTCTTTAATCCGGTGC	20	True	NA	5	True	AATAAA	-5	NA	29679179	29698687	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_29679211_29694663_29695200_29696995
H1_mix_00033481	chr16	+	2203	4	NNC	ENSG00000103485.19	novel	2200	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_2	303.829996324699	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGTGCCTGAGGAGTTTT	20	True	NA	17	True	AATAAA	-17	NA	29679179	29698699	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_29679211_29694663_29695200_29696992_29697128_29697198
H1_mix_00033482	chr16	+	2872	1	FSM	ENSG00000103485.19	ENST00000564967.1	2199	1	31	-704	31	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGTGCCTGAGGAGTTTT	NA	False	NA	17	True	AATAAA	-17	NA	29695827	29698699	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29695800_29698700
H1_mix_00033483	chr16	+	559	2	Genic_Genomic	ENSG00000289181.1	novel	123	1	NA	NA	0	1171	multi-exon	FALSE	canonical	2	11	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCACGTGGTATTTCTAA	4	True	NA	15	True	AATAAA	-23	NA	29709202	29710496	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr16_+_29709456_29710190
H1_mix_00033484	chr16	+	1884	2	Genic_Genomic	ENSG00000260719.1_ENSG00000289181.1	novel	1656	2	NA	NA	17	1343	multi-exon	FALSE	canonical	2	3	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGGCTCACGCCTGTA	21	False	NA	13	True	AATAAA	-14	NA	29709219	29749642	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr16_+_29709456_29747994
H1_mix_00033485	chr16	+	2274	2	Intergenic	novelGene_519	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	40	junction_1	0	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTTTTATTTAACTTAA	NA	False	NA	NA	False	NA	NA	NA	29725026	29728174	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_29725792_29726665
H1_mix_00033490	chr16	+	787	4	FSM	ENSG00000174939.11	ENST00000563177.5	775	4	-12	0	-12	0	multi-exon	FALSE	canonical	3	44	junction_1	28.8905982400273	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCCTTGAAGGAAGGTGC	-14	True	NA	NA	False	GGGGCT	-33	NA	29900362	29905887	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29900567_29901551_29901921_29904851_29904966_29905787
H1_mix_00033491	chr16	+	1020	7	FSM	ENSG00000149932.17	ENST00000570255.6	1013	7	-7	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	423.442243208366	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCGTGTATGGTGTTTAT	24	True	NA	14	True	AATAAA	-16	NA	29962103	29973048	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29962133_29963106_29963309_29963399_29963590_29968024_29968255_29971407_29971579_29972041_29972141_29972949
H1_mix_00033493	chr16	+	488	3	FSM	ENSG00000169592.15	ENST00000568043.5	482	3	-6	0	0	0	multi-exon	FALSE	canonical	3	221	junction_2	10.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGACACACCGGCCCCTA	2	True	NA	NA	False	NA	NA	NA	29996237	30000812	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29996618_29996807_29996861_30000757
H1_mix_00033496	chr16	+	1420	8	FSM	ENSG00000169592.15	ENST00000562441.5	1412	8	-8	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	106.813589290609	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTCTGTATTAAAGGAGT	2	True	NA	-2	True	TTTAAA	-35	NA	29996237	30005762	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29996392_29996546_29996618_29996807_29996861_30000757_30000837_30000928_30001041_30001211_30001531_30004567_30004658_30005220
H1_mix_00033501	chr16	+	1669	7	FSM	ENSG00000149923.14	ENST00000563732.5	846	7	2	-825	2	228	multi-exon	FALSE	canonical	3	231	junction_2	1099.80250752376	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAGGCACACACAGAATCA	-24	True	NA	NA	False	NA	NA	NA	30075979	30085604	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30076095_30076314_30076476_30082483_30082535_30082745_30082848_30083393_30083568_30083654_30083782_30084665
H1_mix_00033504	chr16	+	1502	9	FSM	ENSG00000149923.14	ENST00000566749.5	1490	9	-12	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	1055.44515934036	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGTTTTTGGGTTTGTGCC	1	True	NA	5	True	AATAAA	-10	NA	30076004	30085371	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30076095_30076314_30076476_30081258_30081311_30082483_30082535_30082745_30082964_30083393_30083568_30083654_30083782_30084665_30084856_30084932
H1_mix_00033506	chr16	+	2438	10	FSM	ENSG00000213599.10	ENST00000569959.5	2424	10	-14	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	358.133432613538	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGATGTAAAAAAATTAGC	521	False	NA	NA	False	NA	NA	NA	30194432	30204118	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30194578_30194739_30194792_30194885_30195228_30196973_30197102_30197269_30197358_30200724_30200877_30200980_30201107_30201195_30201294_30202689_30203686_30203807
H1_mix_00033513	chr16	+	634	7	FSM	ENSG00000180209.12	ENST00000322861.12	657	7	20	3	20	-3	multi-exon	FALSE	canonical	0	0	junction_1	7.34846922834953	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGGCGGCGCCTTCAGA	8	False	NA	15	True	AATAAA	-21	NA	30374821	30377988	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30374861_30375819_30375913_30376144_30376221_30376422_30376528_30376619_30376699_30377653_30377703_30377795
H1_mix_00033514	chr16	+	1770	2	NIC	ENSG00000180035.13	novel	3032	3	NA	NA	13	-974	combination_of_known_splicesites	FALSE	canonical	3	59	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCCATACAAGTGTGCAG	-17	True	NA	NA	False	NA	NA	NA	30395432	30398953	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_30395579_30397329
H1_mix_00033515	chr16	+	1465	3	FSM	ENSG00000179965.12	ENST00000434417.1	1454	3	-11	0	-11	0	multi-exon	FALSE	canonical	3	10	junction_1	45	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCACCCGTGCCTGTGAG	107	False	NA	14	True	AATAAA	-14	NA	30407402	30418594	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30407665_30408031_30408195_30417554
H1_mix_00033518	chr16	+	902	3	FSM	ENSG00000156858.12	ENST00000567989.1	902	3	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	4.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGATTCTTTTGTATCTCT	1775	False	NA	23	True	AGTAAA	-15	NA	30655140	30656408	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30655594_30655867_30655940_30656031
H1_mix_00033522	chr16	+	1949	9	FSM	ENSG00000156873.16	ENST00000563913.5	1791	9	-161	3	-11	0	multi-exon	FALSE	canonical	3	185	junction_1	27.7297223210042	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATGAAATAAAATCTGCTA	37	False	NA	-12	True	NA	NA	NA	30748281	30757331	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30748491_30748802_30748916_30751105_30751604_30753231_30753298_30753393_30753558_30756181_30756273_30756366_30756521_30756589_30756716_30756803
H1_mix_00033523	chr16	+	876	2	FSM	ENSG00000156873.16	ENST00000569762.1	880	2	0	4	0	-4	multi-exon	FALSE	canonical	3	268	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAAACCCCATCTCTACT	168	False	NA	NA	False	NA	NA	NA	30748843	30751909	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30748916_30751105
H1_mix_00033525	chr16	+	1641	3	FSM	ENSG00000150281.7	ENST00000395019.3	1617	3	-24	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	5.5	628	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACTAAAGTTACTTGTAT	-11	True	NA	0	True	AATAAA	-38	NA	30896613	30903547	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30896669_30899417_30899534_30902077
H1_mix_00033526	chr16	+	4012	12	ISM	ENSG00000099381.19	ENST00000684162.1	5934	19	7664	0	7339	0	3prime_fragment	FALSE	canonical	2	6	junction_1	8.43154250958323	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGGTCGGTGTATTTG	1438	False	NA	16	True	ATTAAA	-16	NA	30965634	30984664	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_30966387_30966883_30967061_30967500_30967589_30969304_30969463_30969601_30969690_30971377_30971720_30979144_30980195_30980484_30980658_30980738_30980850_30981060_30981181_30983634_30983773_30983849
H1_mix_00033529	chr16	+	668	4	FSM	ENSG00000103496.15	ENST00000613541.1	649	4	-19	0	0	0	multi-exon	FALSE	canonical	3	180	junction_3	26.4701089281224	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTCAGCCTTAGTCATT	-3	True	NA	6	True	AATAAA	-18	NA	31033785	31034877	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31033836_31034012_31034115_31034225_31034326_31034461
H1_mix_00033530	chr16	+	2946	1	FSM	ENSG00000232748.3	ENST00000417110.3	3287	1	341	0	341	0	mono-exon	FALSE	NA	NA	NA	NA	NA	241	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	31059817	31062763	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31059800_31062800
H1_mix_00033536	chr16	+	1757	8	FSM	ENSG00000103510.20	ENST00000538768.2	2500	8	743	0	743	0	multi-exon	FALSE	canonical	3	86	junction_4	8.06605383628177	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGATGTTCTTCATTTCAC	8269	False	NA	75	True	NA	NA	NA	31126326	31131393	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31127089_31127188_31127354_31128049_31128140_31130016_31130158_31130266_31130361_31130455_31130607_31130745_31130901_31131194
H1_mix_00033537	chr16	+	1345	5	FSM	ENSG00000103510.20	ENST00000537402.1	1345	5	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_3	6.28490254498827	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGATGTTCTTCATTTCAC	9214	False	NA	75	True	NA	NA	NA	31127271	31131393	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31127354_31128049_31128140_31130016_31130158_31130266_31130361_31130455
H1_mix_00033539	chr16	+	833	1	FSM	ENSG00000260060.1	ENST00000565152.1	833	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTGTGCTTGTTTTTTG	4731	False	NA	5	True	AATAAA	-17	NA	31196130	31196963	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31196100_31197000
H1_mix_00033540	chr16	+	3892	8	NIC	ENSG00000140691.18	novel	3549	7	NA	NA	77	0	intron_retention	FALSE	canonical	1	1	junction_1	47.3941355194148	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGCAGAACAGCCCAGA	NA	False	NA	-77	True	NA	NA	NA	31458156	31467084	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_31458502_31458853_31459341_31459467_31460000_31461921_31462030_31462130_31462918_31464393_31464888_31465849_31465983_31466078
H1_mix_00033541	chr16	+	1823	9	FSM	ENSG00000131797.13	ENST00000254109.10	1844	9	6	15	1	-15	multi-exon	TRUE	canonical	1	2	junction_1	6.63207169744115	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATCTCT	NA	False	NA	NA	False	NA	NA	NA	31700563	31707422	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31700739_31701662_31701859_31702534_31702682_31703155_31703368_31704219_31704391_31705348_31705473_31705671_31705793_31705889_31706035_31706890
H1_mix_00033542	chr16	+	5899	6	NIC	ENSG00000131797.13	novel	1777	7	NA	NA	1	0	intron_retention	FALSE	canonical	1	1	junction_5	7.49399759807808	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCCCCAGTCTCTGG	NA	False	NA	13	True	AATAAA	-15	NA	31700563	31711986	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_31700739_31703155_31703368_31704219_31704391_31705348_31705473_31705671_31705793_31706890
H1_mix_00033546	chr16	+	1059	5	NIC	ENSG00000197302.11	novel	5994	5	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	38.3210125127194	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTACATATTTGCACCAGAA	10	True	NA	5	True	AATAAA	-10	NA	31713273	31759882	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_31713449_31722625_31722753_31723257_31723354_31753765_31753901_31759356
H1_mix_00033548	chr16	+	563	5	FSM	ENSG00000185947.15	ENST00000561814.1	563	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	59.9765579205743	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCATTCCAAAAAGTGATAT	24	True	NA	NA	False	NA	NA	NA	31873832	31914527	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31873970_31875151_31875303_31884497_31884625_31885160_31885257_31914475
H1_mix_00033549	chr16	+	329	3	ISM	ENSG00000277304.1	ENST00000621154.1	1765	15	8634	18653	8634	-18653	internal_fragment	FALSE	canonical	3	28	junction_1	20	291	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAGGAAGGTGGCCACTG	NA	False	NA	NA	False	NA	NA	NA	32925607	32927739	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_32925746_32927284_32927347_32927610
H1_mix_00033550	chr16	+	1213	5	FSM	ENSG00000091651.9	ENST00000563306.5	1190	5	-23	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	193.978574847842	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGCAATCAGTAATGGAA	-12	True	NA	NA	False	NA	NA	NA	46689658	46696219	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_46689830_46690990_46691121_46692381_46692546_46693092_46693183_46695561
H1_mix_00033551	chr16	+	561	5	FSM	ENSG00000091651.9	ENST00000570260.2	561	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	195.31560997524	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAACTCTACTTTTGAAAC	36	False	NA	NA	False	AAAACA	-10	NA	46689706	46695051	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_46689771_46690990_46691121_46692381_46692546_46693092_46693183_46694938
H1_mix_00033554	chr16	+	1415	3	FSM	ENSG00000102893.16	ENST00000564873.1	1493	3	78	0	78	0	multi-exon	FALSE	canonical	3	202	junction_1	1	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAAGATCCAGGACAGCC	532	False	NA	NA	False	ACTAAA	-21	NA	47462744	47499831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_47463994_47497398_47497489_47499755
H1_mix_00033557	chr16	+	2286	2	FSM	ENSG00000102910.14	ENST00000566719.1	2286	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAACTAAAGAAACTATACAA	1458	False	NA	NA	False	AATAAA	-27	NA	48355685	48362737	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_48356711_48361476
H1_mix_00033558	chr16	+	2249	4	FSM	ENSG00000260086.4	ENST00000568150.4	2244	4	-5	0	-5	0	multi-exon	FALSE	canonical	2	7	junction_2	0.471404520791032	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAAATAAAAGACAAA	1917	False	NA	NA	False	GATAAA	-37	NA	48623409	48746318	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_48623604_48741282_48741403_48744246_48744330_48744466
H1_mix_00033559	chr16	+	1322	5	FSM	ENSG00000279249.3	ENST00000664312.1	1338	5	8	8	0	4	multi-exon	FALSE	canonical	2	5	junction_3	1.22474487139159	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAATGAGTGATTTAT	0	True	NA	NA	False	AATAAA	-13	NA	49282061	49290464	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_49282233_49285520_49285624_49287366_49287476_49289443_49289656_49289737
H1_mix_00033564	chr16	+	2471	19	FSM	ENSG00000121281.13	ENST00000566433.6	2535	19	5	59	5	-51	multi-exon	TRUE	canonical	1	2	junction_1	9.58586922969894	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTTCCCGTTTAAATG	4	True	NA	-55	True	NA	NA	NA	50266555	50310464	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_50266588_50287911_50288351_50290456_50290661_50291735_50291898_50292675_50292826_50293353_50293503_50294639_50294752_50298903_50299032_50300714_50300874_50301081_50301215_50304359_50304552_50304924_50304960_50305502_50305587_50305776_50305850_50307049_50307148_50308326_50308412_50308666_50308793_50309547_50309647_50310453
H1_mix_00033566	chr16	+	6173	26	FSM	ENSG00000121281.13	ENST00000394697.7	6178	26	5	0	5	0	multi-exon	FALSE	canonical	1	2	junction_1	7.05112756940335	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGAAGGTATTTTATTT	4	True	NA	33	True	ATTAAA	-23	NA	50266555	50318135	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_50266588_50287911_50288351_50290456_50290661_50291735_50291898_50292675_50292826_50293353_50293503_50294639_50294752_50298903_50299032_50300714_50300874_50301081_50301215_50304359_50304552_50304924_50304960_50305502_50305587_50305776_50305850_50307049_50307148_50308326_50308412_50308666_50308793_50309547_50309647_50310686_50310881_50311692_50311787_50312035_50312192_50312889_50313037_50313957_50314063_50314291_50314407_50315013_50315139_50315358
H1_mix_00033567	chr16	+	941	6	FSM	ENSG00000121281.13	ENST00000570187.1	1320	6	0	379	0	-379	multi-exon	FALSE	canonical	3	24	junction_4	3.05941170815567	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGGGGTAGAGGGAGACCT	392	False	NA	NA	False	NA	NA	NA	50304393	50308819	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_50304552_50304924_50304960_50305502_50305587_50305776_50305850_50307049_50307148_50308326
H1_mix_00033570	chr16	+	8712	19	NIC	ENSG00000083799.18	novel	3536	18	NA	NA	9	0	intron_retention	FALSE	canonical	3	9	junction_3	25.0333111406914	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTCCTTTTCCTGGATTTC	6	True	NA	3	True	ATTAAA	-14	NA	50742128	50801930	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_50742217_50742761_50742842_50744729_50744867_50749575_50750203_50751603_50751907_50754318_50754425_50776178_50776278_50777824_50777942_50779664_50780045_50781245_50781412_50782324_50782467_50784328_50784452_50786854_50786947_50787785_50787853_50791557_50791691_50792596_50792706_50793545_50793665_50794211_50794429_50796323
H1_mix_00033573	chr16	+	2896	16	FSM	ENSG00000177200.18	ENST00000564255.5	2896	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	7.33818021643574	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCTATGAAATATCTGTG	1237	False	NA	NA	False	NA	NA	NA	53157163	53250175	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_53157542_53209481_53209814_53222643_53222756_53226365_53226513_53227395_53227465_53227547_53227604_53228982_53229101_53231418_53231506_53231646_53231785_53235184_53235307_53238342_53238587_53242839_53243017_53245335_53245480_53245594_53245851_53247292_53247504_53249870
H1_mix_00033574	chr16	+	9565	38	FSM	ENSG00000177200.18	ENST00000565803.2	9565	38	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	7.78931860274735	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTTTCGCCAATTAAAAAA	-3	True	NA	NA	False	NA	NA	NA	53207988	53326856	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_53208348_53209481_53209814_53222643_53222756_53226365_53226513_53227395_53227465_53227547_53227604_53228982_53229101_53231418_53231506_53231646_53231785_53235184_53235307_53238342_53238587_53242839_53243017_53245335_53245480_53245594_53245851_53247292_53247504_53249870_53250067_53254437_53254606_53255599_53255780_53262986_53263098_53267293_53267491_53267926_53268127_53273625_53273786_53274212_53274303_53285595_53285700_53286225_53286344_53287956_53288015_53291724_53291768_53292832_53293053_53296955_53297159_53303719_53304626_53306233_53306398_53307680_53307954_53308685_53308855_53314376_53314517_53314822_53315045_53318211_53318341_53321525_53321631_53324019
H1_mix_00033575	chr16	+	10365	38	Fusion	ENSG00000177200.18_ENSG00000280227.1	novel	8739	29	NA	NA	-17	238	intron_retention	FALSE	canonical	3	14	junction_1	6.91627905720107	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAAAAGCTGCTTCTTGG	8	True	NA	NA	False	NA	NA	NA	53208433	53327739	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr16_+_53208710_53209481_53209814_53222643_53222756_53226365_53226513_53227395_53227465_53227547_53227604_53228982_53229101_53231418_53231506_53231646_53231785_53235184_53235307_53238342_53238587_53242839_53243017_53245335_53245480_53245594_53245851_53247292_53247504_53249870_53250067_53254437_53254606_53255599_53255780_53262986_53263098_53267293_53267491_53267926_53268127_53273625_53273786_53274212_53274303_53285595_53285700_53286225_53286344_53287956_53288015_53291724_53291768_53292832_53293053_53296955_53297159_53303719_53304626_53306233_53306398_53307680_53307954_53308685_53308855_53314376_53314517_53314822_53315045_53318211_53318341_53321525_53321631_53324019
H1_mix_00033576	chr16	+	1040	1	FSM	ENSG00000262714.1	ENST00000571340.1	2142	1	-10	1112	-10	-1112	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTTCATTAAATTCATG	8444	False	NA	NA	False	TTTAAA	-20	NA	53386933	53387973	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_53386900_53388000
H1_mix_00033579	chr16	+	717	5	FSM	ENSG00000087245.13	ENST00000564864.5	736	5	19	0	19	0	multi-exon	FALSE	canonical	1	5	junction_1	109.641176115545	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAGCATCCACTCTAGTC	762	False	NA	NA	False	NA	NA	NA	55480016	55485776	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_55480056_55482908_55483136_55484015_55484165_55485298_55485428_55485603
H1_mix_00033580	chr16	+	909	1	FSM	ENSG00000261997.1	ENST00000576365.1	3828	1	-320	3239	-320	-3239	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATGAATTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	55537879	55538788	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_55537900_55538800
H1_mix_00033586	chr16	+	560	3	FSM	ENSG00000187193.9	ENST00000564974.1	549	3	-11	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	551.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCTCTGGGCACCTCA	0	True	NA	6	True	AATAAA	-14	NA	56682469	56684196	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_56682569_56683164_56683387_56683957
H1_mix_00033596	chr16	+	1114	2	FSM	ENSG00000051108.15	ENST00000568814.1	509	2	-131	-474	-131	0	multi-exon	FALSE	canonical	3	318	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGACTCCTGTCATCCT	1955	False	NA	29	True	AATAAA	-22	NA	56941879	56943881	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_56942238_56943125
H1_mix_00033600	chr16	+	2313	1	FSM	ENSG00000279803.1	ENST00000624886.1	2285	1	12	-40	12	40	mono-exon	FALSE	NA	NA	NA	NA	NA	218	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGCCCTCACCCTCAGAT	1766	False	NA	NA	False	AAAAAG	-30	NA	57142663	57144976	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_57142700_57145000
H1_mix_00033601	chr16	+	724	4	FSM	ENSG00000159579.14	ENST00000564435.5	743	4	19	0	-7	0	multi-exon	FALSE	canonical	3	10	junction_1	127.625319675299	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTATTCCACTGGAAGAT	149	False	NA	NA	False	NA	NA	NA	57186299	57209110	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_57186430_57204503_57205009_57208057_57208111_57209074
H1_mix_00033604	chr16	+	1042	4	FSM	ENSG00000088682.14	ENST00000562734.5	1039	4	-3	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	18.5532267334343	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTTAGTACACTTGGTA	-11	True	NA	NA	False	TATAAA	-7	NA	57447478	57457140	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_57447579_57451039_57451209_57452800_57452937_57456503
H1_mix_00033606	chr16	+	1437	8	NIC	ENSG00000088682.14	novel	1482	8	NA	NA	0	-65	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	71.7196924541251	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGGCCTGGTGTCACAT	4	True	NA	-77	True	NA	NA	NA	57447493	57461177	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_57447579_57451039_57451209_57452800_57452937_57456503_57456647_57458245_57458351_57459564_57459721_57460050_57460105_57460588
H1_mix_00033607	chr16	+	952	5	FSM	ENSG00000088682.14	ENST00000568790.5	1027	5	52	23	-26	0	multi-exon	FALSE	canonical	3	175	junction_1	17.0733710789639	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCGAGCACTGGGATTT	44	False	NA	NA	False	NA	NA	NA	57447533	57457389	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_57447579_57451039_57451209_57452800_57452937_57456503_57456647_57456930
H1_mix_00033614	chr16	+	3035	15	FSM	ENSG00000140854.13	ENST00000566611.5	3854	15	0	819	0	-802	multi-exon	FALSE	canonical	0	0	junction_13	99.7196068985433	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCGTGTGGGGAAGCCATG	47	False	NA	NA	False	NA	NA	NA	57735863	57756066	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_57736117_57736977_57737284_57741686_57741818_57744393_57744512_57750826_57750928_57751260_57751303_57751640_57751725_57751939_57753268_57753388_57753520_57753944_57753996_57754929_57754998_57755118_57755239_57755344_57755495_57755840_57755918_57755991
H1_mix_00033618	chr16	+	752	1	FSM	ENSG00000276166.1	ENST00000613495.1	667	1	-49	-36	-49	36	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACGGCCAGCTCGTCACCC	3814	False	NA	47	True	NA	NA	NA	57759308	57760060	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_57759300_57760100
H1_mix_00033620	chr16	+	3166	4	FSM	ENSG00000103005.12	ENST00000423271.7	1217	4	-99	-1850	-97	0	multi-exon	FALSE	canonical	3	3	junction_3	329.709973562625	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACCTAGCTGAGCCTGAC	1699	False	NA	7	True	AATAAA	-27	NA	58001307	58013558	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_58001582_58002478_58002646_58009928_58010113_58011017
H1_mix_00033621	chr16	+	3217	4	FSM	ENSG00000103005.12	ENST00000568848.5	548	4	-91	-2578	-77	-257	multi-exon	TRUE	canonical	0	0	junction_3	331.12334056461	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGATGATGTTGTGTG	1719	False	NA	NA	False	AGTAAA	-12	NA	58001327	58014053	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_58001582_58002478_58002646_58009928_58010113_58011441
H1_mix_00033622	chr16	+	2250	8	NNC	ENSG00000103005.12	novel	2248	7	NA	NA	-77	-1	intron_retention	TRUE	non_canonical	3	236	junction_7	155.47780207726	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTTTTTGGACTACTTG	1719	False	NA	18	True	AATAAA	-20	NA	58001327	58021616	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_58001582_58002478_58002646_58009928_58010113_58014272_58014327_58017333_58017440_58018971_58019056_58020140_58020559_58020633
H1_mix_00033623	chr16	+	2230	7	NIC	ENSG00000103005.12	novel	2248	7	NA	NA	6	-1	intron_retention	FALSE	canonical	3	25	junction_1	238.182994541778	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTTTTTGGACTACTTG	1	True	NA	18	True	AATAAA	-20	NA	58001429	58021616	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_58001589_58002478_58002646_58009928_58010113_58014272_58014327_58017333_58017440_58018971_58019056_58020140
H1_mix_00033650	chr16	+	2689	3	FSM	ENSG00000067955.15	ENST00000652116.1	2686	3	-3	0	-3	0	multi-exon	FALSE	canonical	1	5	junction_1	181.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTAGTAAAAACAGGGTC	17	False	NA	92	True	AATAAA	-5	NA	67079556	67101045	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_67079783_67082212_67082340_67098709
H1_mix_00033664	chr16	+	802	6	FSM	ENSG00000168701.19	ENST00000562235.5	775	6	-43	16	1	0	multi-exon	FALSE	canonical	3	37	junction_4	232.36522975695	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCTTAGAATGTGGCTG	-24	True	NA	9	True	NA	NA	NA	67227113	67229262	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_67227225_67227835_67227932_67228354_67228415_67228494_67228658_67228796_67228882_67228975
H1_mix_00033666	chr16	+	4448	15	NIC	ENSG00000135740.17	novel	3708	16	NA	NA	-413	0	intron_retention	FALSE	canonical	0	0	junction_12	19.8788422033814	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTGTCTTGTGTCCATG	1531	False	NA	15	True	ATTAAA	-15	NA	67248458	67272190	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_67249202_67252541_67252845_67255020_67255185_67255392_67255472_67255752_67255931_67256468_67257114_67257344_67257435_67257530_67257602_67258317_67258448_67259572_67259662_67259819_67259947_67264351_67264523_67265039_67265107_67266087_67266226_67270737
H1_mix_00033669	chr16	+	5499	20	FSM	ENSG00000196155.13	ENST00000563969.5	6949	20	1450	0	126	0	multi-exon	FALSE	canonical	3	23	junction_2	5.53508076847786	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTCTGATGGGCACATGC	739	False	NA	14	True	AATAAA	-17	NA	67278959	67289479	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_67280807_67280881_67281006_67281090_67281185_67281566_67281645_67281723_67281838_67282008_67282108_67282200_67282350_67282502_67282642_67282741_67282859_67284274_67284458_67284712_67285216_67285289_67285537_67286273_67286364_67286444_67286667_67286748_67286920_67286999_67287178_67287897_67288015_67288166_67288401_67288488_67288605_67288802
H1_mix_00033671	chr16	+	2184	12	FSM	ENSG00000039523.20	ENST00000566559.5	2251	12	67	0	67	0	multi-exon	FALSE	canonical	3	73	junction_3	9.64664974173259	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCCACCCACAAAACCAGT	667	False	NA	NA	False	NA	NA	NA	67538144	67542668	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_67538551_67538671_67538825_67538989_67539069_67539727_67539752_67539845_67539900_67540052_67540206_67540299_67540364_67540457_67540502_67540578_67540705_67541429_67541579_67541652_67541783_67541866
H1_mix_00033672	chr16	+	754	6	FSM	ENSG00000039523.20	ENST00000569474.5	754	6	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	4.33589667773576	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTCGGGAACAGGCTTT	1409	False	NA	NA	False	NA	NA	NA	67539864	67541758	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_67539900_67540052_67540206_67540299_67540364_67540457_67540705_67541429_67541579_67541652
H1_mix_00033675	chr16	+	2797	10	FSM	ENSG00000102974.16	ENST00000401394.6	2797	10	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	135.819415328763	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGTGCTCCAAAGACTC	18	True	NA	4	True	AATAAA	-13	NA	67562572	67639168	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_67562725_67571147_67571265_67616744_67616879_67620696_67620818_67621441_67621592_67626554_67626716_67628369_67628553_67629397_67629534_67636689_67636852_67637687
H1_mix_00033682	chr16	+	747	2	FSM	ENSG00000038358.15	ENST00000577028.5	747	2	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGAGCCACTCTACACCA	6935	False	NA	NA	False	NA	NA	NA	67880348	67881180	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_67880991_67881075
H1_mix_00033687	chr16	+	1913	16	NIC	ENSG00000167264.18	novel	1982	17	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_9	42.0216875223047	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTGTGTCCTGGCATG	-8	True	NA	13	True	CATAAA	-1	NA	68023281	68079320	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_68023352_68025414_68025495_68038005_68038150_68049504_68049551_68053563_68053656_68054573_68054618_68056363_68056425_68061065_68061114_68066316_68066383_68070133_68070221_68070939_68071109_68074033_68074156_68075354_68075505_68076631_68076720_68078444_68078519_68078748
H1_mix_00033688	chr16	+	1959	17	NNC	ENSG00000167264.18	novel	1982	17	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_10	40.0560154658448	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTGTGTCCTGGCATG	13	False	NA	13	True	CATAAA	-1	NA	68023302	68079320	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_68023352_68025414_68025495_68038005_68038150_68049504_68049551_68053563_68053656_68054573_68054618_68056363_68056425_68061065_68061114_68066316_68066383_68066565_68066637_68070137_68070221_68070939_68071109_68074033_68074156_68075354_68075505_68076631_68076720_68078444_68078519_68078748
H1_mix_00033693	chr16	+	3022	1	FSM	ENSG00000263276.1	ENST00000571975.1	3022	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGGGCCCAGCAGAAACT	116	False	NA	NA	False	NA	NA	NA	68224712	68227734	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_68224700_68227700
H1_mix_00033696	chr16	+	1662	8	ISM	ENSG00000103064.15	ENST00000219343.11	6255	11	-327	7018	-317	0	5prime_fragment	TRUE	canonical	3	71	junction_1	28.6178194808188	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCTTTGCTGGGACCAC	12	True	NA	NA	False	NA	NA	NA	68264198	68294801	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_68264577_68266592_68266722_68274690_68275250_68287745_68287872_68290395_68290541_68291208_68291333_68291557_68291662_68294704
H1_mix_00033699	chr16	+	1024	8	ISM	ENSG00000132600.18	ENST00000690311.1	2182	17	-13	17275	0	-5	5prime_fragment	FALSE	canonical	3	14	junction_2	115.695060131258	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGGTAAGAGGCAGGAGC	28	True	NA	NA	False	NA	NA	NA	68311049	68339963	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_68311112_68312041_68312177_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787
H1_mix_00033700	chr16	+	330	3	FSM	ENSG00000132600.18	ENST00000562456.1	344	3	0	14	0	-14	multi-exon	FALSE	canonical	3	251	junction_1	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCCTGCATCTTGCA	4819	False	NA	NA	False	NA	NA	NA	68315950	68324851	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_68316075_68321425_68321463_68324682
H1_mix_00033703	chr16	+	4566	5	FSM	ENSG00000184939.16	ENST00000563169.7	4568	5	2	0	2	0	multi-exon	TRUE	canonical	3	13	junction_1	18.1383571472171	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGAGTCAGTTTGTCGTTT	-10	True	NA	5	True	AATAAA	-18	NA	68539292	68567131	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_68539480_68539757_68539826_68557997_68558125_68558472_68558569_68563043
H1_mix_00033708	chr16	+	4293	4	NIC	ENSG00000103044.11	novel	1163	4	NA	NA	-174	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	16.0485374896143	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCGAAACTACTACTTTGT	360	False	NA	13	True	AATAAA	-22	NA	69106079	69117660	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_69106317_69109395_69110032_69113440_69113543_69114342
H1_mix_00033709	chr16	+	612	5	FSM	ENSG00000141076.18	ENST00000567460.5	595	5	-17	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	356.886886842316	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGCTTGTGAAGAGCCATC	-30	True	NA	NA	False	NA	NA	NA	69132595	69143328	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_69132690_69136695_69136888_69137800_69137886_69139824_69139915_69143177
H1_mix_00033715	chr16	+	926	4	FSM	ENSG00000103018.18	ENST00000686167.1	2493	4	-31	1598	0	-1598	multi-exon	FALSE	canonical	3	950	junction_2	36.9353790047188	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATATTCCTTGGCATTAA	-2	True	NA	NA	False	NA	NA	NA	69424586	69459588	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_69424858_69447149_69447279_69448114_69448145_69459092
H1_mix_00033716	chr16	+	9398	6	FSM	ENSG00000102908.22_ENSG00000260772.1	ENST00000565301.2	1725	6	-411	-7262	-32	0	multi-exon	FALSE	canonical	1	1	junction_3	13.6381816969859	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGCAGTGGATAGCTG	1473	False	NA	3	True	AATAAA	-15	NA	69565933	69704652	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_69566375_69626402_69626529_69647027_69647168_69694085_69694240_69695135_69695380_69696359
H1_mix_00033718	chr16	+	8565	19	FSM	ENSG00000090857.14	ENST00000288050.9	8549	19	-16	0	-16	0	multi-exon	FALSE	canonical	3	11	junction_1	30.1647738305281	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCTGCTTGTGAAATGTTC	80	False	NA	22	True	AATAAA	-22	NA	70114315	70162537	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_70114441_70114820_70114931_70120460_70120720_70127259_70127394_70128783_70128866_70128958_70129123_70130422_70130545_70131301_70131420_70132150_70132301_70136193_70136387_70138898_70139024_70142233_70142390_70142552_70142687_70143509_70143659_70144420_70144534_70146133_70146229_70148463_70148554_70153390_70153574_70156474
H1_mix_00033720	chr16	+	478	6	FSM	ENSG00000157349.17	ENST00000570055.5	556	6	78	0	22	0	multi-exon	FALSE	canonical	1	1	junction_1	188.775422129047	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCGAGACCAGCCTGGGC	38	False	NA	NA	False	NA	NA	NA	70294854	70319683	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_70294918_70312608_70312658_70314901_70314956_70315968_70316105_70317495_70317589_70319600
H1_mix_00033723	chr16	+	585	5	FSM	ENSG00000157349.17	ENST00000562912.5	569	5	-16	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	183.65320579832	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGACCCTGTCTCTACTA	-30	True	NA	NA	False	NA	NA	NA	70299161	70319709	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_70299355_70314901_70314956_70315968_70316105_70317495_70317589_70319600
H1_mix_00033726	chr16	+	278	3	FSM	ENSG00000168872.17	ENST00000565195.5	586	3	0	308	0	-308	multi-exon	FALSE	canonical	3	323	junction_1	20	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTACTTTTGGATGCCC	-18	True	NA	23	True	AAAACA	-17	NA	70346870	70355535	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_70347049_70350556_70350606_70355484
H1_mix_00033732	chr16	+	3075	2	Intergenic	novelGene_529	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	400	junction_1	0	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCACCAGAGTTGGGGAGT	NA	False	NA	NA	False	ACTAAA	-30	NA	70616429	70623828	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_70619243_70623566
H1_mix_00033736	chr16	+	724	5	FSM	ENSG00000182149.21	ENST00000566536.5	612	5	-112	0	-95	0	multi-exon	FALSE	canonical	3	900	junction_3	21.7140507506085	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCACTGTATTGCTCAGT	972	False	NA	NA	False	NA	NA	NA	71895397	71920898	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_71895590_71915625_71915729_71916461_71916643_71917046_71917135_71920738
H1_mix_00033749	chr16	+	3416	4	NIC	ENSG00000184517.12	novel	493	4	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	22.9540604009158	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTCTTTGTATATG	499	False	NA	9	True	AATAAA	-15	NA	75149018	75172234	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_75149268_75152908_75152967_75166769_75166897_75169252
H1_mix_00033751	chr16	+	2284	1	FSM	ENSG00000034713.8	ENST00000565985.1	2274	1	-10	0	-10	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTACTGTGGCCATGTCCT	9209	False	NA	NA	False	AATAAA	-19	NA	75575597	75577881	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_75575600_75577900
H1_mix_00033764	chr16	+	345	4	FSM	ENSG00000166451.14	ENST00000569461.1	329	4	-16	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	543.13922913211	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGCCTGGGGAACACAGT	-18	True	NA	NA	False	NA	NA	NA	81007206	81020146	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_81007278_81011929_81012111_81014135_81014182_81020099
H1_mix_00033767	chr16	+	6140	2	FSM	ENSG00000166454.10	ENST00000562969.1	505	2	0	-5635	0	0	multi-exon	FALSE	canonical	3	680	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCCAGTTATTTTCATT	215	False	NA	5	True	GATAAA	-16	NA	81036057	81047346	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_81036207_81041355
H1_mix_00033771	chr16	+	532	5	NNC	ENSG00000230989.8	novel	1949	5	NA	NA	0	55498	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2727.67877507598	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAGCACAGTGAAAAATGT	51	False	NA	NA	False	NA	NA	NA	83808061	83875235	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_83808122_83808679_83808747_83809304_83809426_83811420_83811667_83875197
H1_mix_00033772	chr16	+	1861	5	NNC	ENSG00000230989.8	novel	1949	5	NA	NA	0	55498	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2727.67877507598	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAGCACAGTGAAAAATGT	51	False	NA	NA	False	NA	NA	NA	83808061	83875235	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_83808122_83808679_83808747_83809304_83809426_83811420_83812996_83875197
H1_mix_00033774	chr16	+	14882	1	FSM	ENSG00000103150.7	ENST00000569024.1	4489	1	467	-10860	467	0	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTAGCATACCTGCACTC	NA	False	NA	NA	False	AATAAA	-22	NA	83912149	83927031	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_83912100_83927000
H1_mix_00033787	chr16	+	1114	9	FSM	ENSG00000103196.12	ENST00000563066.5	1123	9	9	0	9	0	multi-exon	FALSE	canonical	2	5	junction_1	4.38570119821221	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCCCTCAGGTAACTAC	NA	False	NA	NA	False	NA	NA	NA	84842011	84873110	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_84842266_84845785_84845905_84849384_84849518_84850567_84850684_84854728_84854830_84866896_84867041_84868850_84868912_84872441_84872509_84872991
H1_mix_00033794	chr16	+	1481	3	FSM	ENSG00000131143.10	ENST00000564903.1	1481	3	0	0	0	0	multi-exon	FALSE	canonical	3	5226	junction_2	6	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCACTGCTAATAAATGAC	920	False	NA	-3	True	NA	NA	NA	85801201	85806968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_85801279_85804936_85805105_85805732
H1_mix_00033801	chr16	+	2019	11	NIC	ENSG00000172530.21	novel	2398	14	NA	NA	5	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_7	42.3207986692123	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGCCTTACGCTTTTCC	35	False	NA	15	True	AATAAA	-16	NA	87951491	88077316	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_87951516_87981035_87981128_87984059_87984260_88006089_88006266_88018427_88018668_88027482_88027651_88033108_88033246_88035322_88035395_88037972_88038012_88072068_88072213_88076589
H1_mix_00033807	chr16	+	2096	1	FSM	ENSG00000260630.8	ENST00000568633.1	2096	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTCCCCCATGATCCTT	NA	False	NA	18	True	AGTAAA	-18	NA	88673395	88675491	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_88673400_88675500
H1_mix_00033811	chr16	+	584	5	NIC	ENSG00000167515.10	novel	1084	5	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	32	junction_2	452.969645782143	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGGCTTTTTCCTTCCG	5	True	NA	28	True	ACTAAA	-16	NA	88857137	88861112	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_88857184_88858618_88858790_88859662_88859751_88859892_88859973_88860913
H1_mix_00033827	chr16	+	1401	2	FSM	ENSG00000197912.16	ENST00000567138.3	1376	2	-34	9	0	-9	multi-exon	FALSE	canonical	3	663	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCTGAGCTAGTTTTGC	2405	False	NA	5	True	AATAAA	-19	NA	89531985	89533782	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89532067_89532462
H1_mix_00033831	chr16	+	3728	3	FSM	ENSG00000197912.16	ENST00000644281.1	3728	3	0	0	0	0	multi-exon	FALSE	canonical	3	667	junction_2	19.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGTTGGAAAATCTACAT	NA	False	NA	4	True	AATAAA	-4	NA	89551173	89557749	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89553961_89554485_89554564_89556886
H1_mix_00033840	chr16	+	2573	1	NIC	ENSG00000178773.15	novel	2442	15	NA	NA	569	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTAGTTCTCTTGTGCCTT	578	False	NA	15	True	AATAAA	-15	NA	89594668	89597241	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_89594700_89597200
H1_mix_00033857	chr16	+	2180	17	NIC	ENSG00000141002.20	novel	2248	18	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	19	junction_4	87.4578246570883	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGCTCTGCCGTCCGCACC	4	True	NA	30	True	TATAAA	-12	NA	89873591	89911377	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_89873860_89883350_89883513_89884581_89884657_89885847_89885967_89892192_89892276_89893727_89893859_89895037_89895138_89895989_89896084_89898556_89898650_89898766_89898873_89900634_89900795_89904117_89904206_89904937_89905097_89906193_89906285_89907242_89907323_89910590_89910664_89911079
H1_mix_00033858	chr16	+	2403	19	NNC	ENSG00000141002.20	novel	2377	19	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_11	115.50126929985	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGCTCTGCCGTCCGCACC	4	True	NA	30	True	TATAAA	-12	NA	89873591	89911377	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_89873860_89883350_89883513_89884581_89884657_89885847_89885967_89887651_89887718_89892192_89892276_89893727_89893859_89895037_89895138_89895989_89896084_89898556_89898650_89898766_89898888_89900634_89900795_89904117_89904206_89904937_89905097_89906193_89906285_89907242_89907323_89908965_89909108_89910590_89910664_89911079
H1_mix_00033861	chr16	+	2320	19	NIC	ENSG00000141002.20	novel	2377	19	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	3	60	junction_16	93.1241041053931	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGCTCTGCCGTCCGCACC	32	False	NA	30	True	TATAAA	-12	NA	89873659	89911377	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_89873860_89883350_89883513_89884581_89884657_89885847_89885967_89887651_89887718_89892192_89892276_89893727_89893859_89895037_89895138_89895989_89896084_89898556_89898650_89898766_89898873_89900634_89900795_89904117_89904206_89904937_89905097_89906193_89906285_89907242_89907323_89908965_89909108_89910590_89910664_89911079
H1_mix_00033864	chr16	+	515	3	FSM	ENSG00000141002.20	ENST00000566283.1	515	3	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	160.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTCTGCCGTCCGCACCTT	1695	False	NA	32	True	TATAAA	-14	NA	89908965	89911379	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89909108_89910590_89910664_89911079
H1_mix_00033868	chr16	+	5062	3	FSM	ENSG00000258947.8	ENST00000680788.1	5062	3	0	0	0	0	multi-exon	FALSE	canonical	3	748	junction_2	35	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGCTTGGTGCCAGAGA	112	False	NA	30	True	AATAAA	-18	NA	89929092	89936092	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89932680_89933467_89933579_89934728
H1_mix_00033869	chr16	+	624	4	ISM	ENSG00000140995.17	ENST00000562986.5	468	5	10	1609	-2	0	5prime_fragment	FALSE	canonical	3	10	junction_1	243.53690115098	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTGTGTCTAGTTTGT	23	True	NA	NA	False	ATTAAA	-11	NA	89948788	89959363	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_89948815_89955168_89955267_89957510_89957661_89959013
H1_mix_00033871	chr16	+	3130	12	NIC	ENSG00000223959.9	novel	2447	17	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	16.8709246685993	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATGTGGCTAAATAGT	25	True	NA	0	True	AATAAA	-8	NA	89972632	89996610	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_89972766_89977638_89977803_89978809_89978879_89980241_89980337_89981772_89981924_89984530_89984600_89985445_89985571_89988851_89988952_89990865_89991004_89992720_89992829_89993767_89993894_89994758
H1_mix_00033872	chr16	+	2758	4	FSM	ENSG00000223959.9	ENST00000427658.1	2758	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	7.36357401145817	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATGTGGCTAAATAGT	NA	False	NA	0	True	AATAAA	-8	NA	89990331	89996610	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_89991004_89992720_89992829_89993767_89993894_89994758
H1_mix_00033876	chr16	+	3245	11	FSM	ENSG00000141013.17	ENST00000620723.4	3308	11	63	0	-1	0	multi-exon	FALSE	canonical	3	7	junction_2	30.2813473940642	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACCTGTGGTTTTCACTT	-10	True	NA	25	True	TATAAA	-27	NA	90022662	90044971	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_90022725_90027635_90027723_90031175_90031497_90032717_90032925_90035632_90035688_90036380_90036587_90037231_90037400_90037761_90037849_90040299_90040510_90042469_90042536_90043195
H1_mix_00033881	chr16	-	1895	6	NIC	ENSG00000234769.7	novel	1246	9	NA	NA	685	296	intron_retention	FALSE	canonical	3	13	junction_3	92.8297366149447	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACAGTGTGCTTTTAATA	NA	False	NA	NA	False	AATAAA	-15	NA	17383	14084	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_14512_14651_14721_15480_16449_16536_16739_16915_17052_17290
H1_mix_00033882	chr16	-	2774	17	NNC	ENSG00000007384.15	novel	2992	18	NA	NA	39	0	at_least_one_novel_splicesite	FALSE	canonical	1	19	junction_7	66.9883385373902	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCAGGGCTTCCCTATCC	57	False	NA	-9	True	AATAAA	-32	NA	72582	58061	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_58760_58973_59128_59248_59350_59418_59495_59731_59827_60215_60280_60438_60540_61384_61460_61584_61697_61797_62053_62537_62692_62774_62898_62972_63183_63586_63801_64698_64830_64898_65040_72512
H1_mix_00033883	chr16	-	914	3	FSM	ENSG00000007384.15	ENST00000486045.1	914	3	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGCTGGCCCTCAGGGT	NA	False	NA	NA	False	NA	NA	NA	60193	58973	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_59350_59418_59495_59731
H1_mix_00033885	chr16	-	3083	13	NIC	ENSG00000103148.17	novel	3128	14	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_12	47.6225757621553	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGAAGTGGAGCCTCCCT	NA	False	NA	NA	False	NA	NA	NA	138703	85385	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_86871_88697_88891_89712_89903_92595_92726_93218_93326_98144_98302_100371_100510_110524_110607_112621_112776_119125_119256_130521_130592_138149_138335_138641
H1_mix_00033886	chr16	-	2507	10	NIC	ENSG00000103148.17	novel	2812	11	NA	NA	-75	-1	combination_of_known_splicesites	FALSE	canonical	3	24	junction_9	43.19665053316	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGTCTGGGCAGGCCCT	261	False	NA	-45	True	AATAAA	-31	NA	138436	85801	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_86871_88697_88891_89712_89903_92595_92726_93218_93326_98144_98302_100371_100510_110524_110607_112621_112776_138149
H1_mix_00033887	chr16	-	2737	10	FSM	ENSG00000007392.17	ENST00000426094.5	2737	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_9	171.065794865132	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGCGTAGAGGCTTTT	-8	True	NA	-10	True	AATAAA	-44	NA	229439	188968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_189340_189967_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_220648_220748_227241_227337_227986
H1_mix_00033888	chr16	-	1212	9	NIC	ENSG00000007392.17	novel	1434	10	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_4	166.141835113857	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGCGGGGGGTTTCTGCT	5275	False	NA	-31	True	AATAAA	-23	NA	229404	188989	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_189340_189967_190136_190540_190571_192926_193016_206003_206148_208077_208189_220648_220748_227241_227337_229278
H1_mix_00033890	chr16	-	1654	11	NIC	ENSG00000007392.17	novel	1520	11	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_10	197.58734777308	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTATTGTTTTGGAGCTA	2	True	NA	-20	True	AATACA	-23	NA	229129	189097	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_189340_189967_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_220648_220748_227241_227337_228332_228403_228700
H1_mix_00033896	chr16	-	6340	8	FSM	ENSG00000103126.15	ENST00000461023.5	6340	8	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_4	27.6117395914366	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCTGTGGTGTGTCTTC	8951	False	NA	-4	True	AATAAA	-18	NA	346322	287439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_288249_289439_293719_297055_297227_297721_298252_304303_304442_309972_310070_314542_314684_346147
H1_mix_00033897	chr16	-	2588	9	NIC	ENSG00000103126.15	novel	3324	10	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_8	61.6855686121154	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCTGTGGTGTGTCTT	1	True	NA	-5	True	AATAAA	-17	NA	352672	287440	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_288249_289439_289608_293487_293719_297055_297227_297721_298252_304303_304442_309972_310070_314542_314684_352368
H1_mix_00033898	chr16	-	2565	3	FSM	ENSG00000129925.11	ENST00000467452.1	646	3	224	-2143	0	0	multi-exon	FALSE	canonical	3	646	junction_1	34	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTCCTCCTACTGAGGA	7114	False	NA	-11	True	AATAAA	-18	NA	374851	371861	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_374152_374220_374400_374755
H1_mix_00033899	chr16	-	844	4	FSM	ENSG00000129925.11	ENST00000424078.5	844	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	317.997903557031	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTCCTCCTACTGAGGA	7114	False	NA	-11	True	AATAAA	-18	NA	374851	371861	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_372284_374004_374152_374220_374400_374755
H1_mix_00033900	chr16	-	639	4	FSM	ENSG00000129925.11	ENST00000475348.1	639	4	0	0	0	0	multi-exon	FALSE	canonical	3	585	junction_3	26.9938264547038	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCTGCTCCGCAGACACA	5490	False	NA	NA	False	NA	NA	NA	376475	374808	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_374893_375132_375257_375344_375436_376135
H1_mix_00033904	chr16	-	1999	8	FSM	ENSG00000161999.13	ENST00000568689.5	1998	8	0	-1	0	0	multi-exon	FALSE	canonical	3	34	junction_1	176.745175727252	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTTGCCAGTAAAGCCTT	-4	True	NA	-40	True	NA	NA	NA	684344	681697	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_682875_682957_683088_683166_683235_683321_683599_683684_683782_683860_683910_684065_684156_684233
H1_mix_00033906	chr16	-	1015	8	FSM	ENSG00000161999.13	ENST00000562824.5	1015	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_7	180.855788755933	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCCTGGACCAGGACGC	9769	False	NA	NA	False	CATAAA	-33	NA	684363	682527	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_682875_682952_683088_683166_683235_683321_683442_683529_683599_683684_683782_683860_683910_684233
H1_mix_00033912	chr16	-	3314	10	FSM	ENSG00000127580.17	ENST00000647644.1	3303	10	0	-11	0	0	multi-exon	FALSE	canonical	0	0	junction_9	88.545168776056	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCGGCACTGCGTGTCACC	7002	False	NA	-8	True	AATAAA	-15	NA	690247	684621	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_684903_684991_685177_685256_685598_685678_685784_685868_685991_686067_686187_686743_687417_687561_687740_687826_688049_689159
H1_mix_00033915	chr16	-	899	5	FSM	ENSG00000162004.19	ENST00000482152.1	899	5	0	0	0	0	multi-exon	TRUE	canonical	3	26	junction_4	3.96074487943871	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCACCCAGCCCCCCATAA	3725	False	NA	NA	False	NA	NA	NA	724635	722624	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_722790_722921_723162_723856_723937_724105_724206_724321
H1_mix_00033916	chr16	-	1718	4	FSM	ENSG00000162004.19	ENST00000482878.5	3458	4	0	1740	0	220	multi-exon	FALSE	canonical	3	12	junction_1	1.88561808316413	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGCCCCGCTGGGATGGG	-8	True	NA	NA	False	NA	NA	NA	726456	724321	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_725294_725412_725581_725793_725881_725965
H1_mix_00033917	chr16	-	668	7	FSM	ENSG00000162004.19	ENST00000423653.6	668	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	1.60727512683216	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCACACAGGCTGTGGTGA	1467	False	NA	NA	False	NA	NA	NA	726893	724926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_724990_725077_725146_725236_725294_725412_725581_725793_725881_725965_726086_726788
H1_mix_00033921	chr16	-	3159	10	FSM	ENSG00000103245.14	ENST00000540986.5	3212	10	54	-1	54	0	multi-exon	FALSE	canonical	3	94	junction_5	18.7049871213502	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCCTACGAAAACAGCTCCT	118	False	NA	-14	True	AATAAA	-19	NA	740880	729764	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_730656_730842_731001_731564_731703_732300_732374_733297_733428_734228_734348_734736_734872_736265_736399_737185_737330_739642
H1_mix_00033927	chr16	-	433	1	FSM	ENSG00000276931.1	ENST00000620075.1	638	1	-17	222	-17	-222	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGCTGAGCTGGCCCA	1943	False	NA	NA	False	NA	NA	NA	969029	968596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_968600_969000
H1_mix_00033928	chr16	-	1303	6	NIC	ENSG00000059145.19	novel	4320	6	NA	NA	0	-218	combination_of_known_junctions	FALSE	canonical	3	39	junction_5	16.6084315936214	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCAAGGTATTTTCCTCA	4	True	NA	NA	False	NA	NA	NA	1379683	1366025	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_1366396_1367091_1367350_1367655_1367859_1370129_1370358_1371518_1371612_1379532
H1_mix_00033929	chr16	-	937	3	NNC	ENSG00000174109.5	novel	917	2	NA	NA	0	50696	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	80	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATACTTTGGGCCAACAT	-10	True	NA	NA	False	NA	NA	NA	1420747	1369055	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_1369084_1419759_1420613_1420691
H1_mix_00033930	chr16	-	1038	2	NNC	ENSG00000174109.5	novel	917	2	NA	NA	-13	50696	intron_retention	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATACTTTGGGCCAACAT	NA	False	NA	NA	False	NA	NA	NA	1420769	1369055	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_1369084_1419759
H1_mix_00033933	chr16	-	2740	7	FSM	ENSG00000103249.18	ENST00000565092.6	2740	7	0	0	0	0	multi-exon	FALSE	canonical	2	229	junction_2	39.9819403675654	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCGCCTTTGCCAGCGTC	NA	False	NA	-9	True	AATAAA	-12	NA	1449797	1445343	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1446718_1447005_1447087_1447391_1447569_1447654_1447715_1448354_1448485_1448680_1448767_1448965
H1_mix_00033935	chr16	-	1852	1	FSM	ENSG00000280327.1	ENST00000623878.1	1656	1	-199	3	-199	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTTATGCATACGCGA	7556	False	NA	NA	False	GATAAA	-16	NA	1578570	1576718	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1576700_1578600
H1_mix_00033936	chr16	-	835	5	FSM	ENSG00000103024.8	ENST00000568561.5	813	5	0	-22	0	0	multi-exon	TRUE	canonical	0	0	junction_3	187.862150259173	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTACGACGTTAAGACATTT	20	True	NA	-6	True	AATAAA	-40	NA	1771510	1770319	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1770767_1770880_1770994_1771069_1771192_1771279_1771411_1771488
H1_mix_00033937	chr16	-	713	2	FSM	ENSG00000074071.15	ENST00000569585.1	713	2	0	0	0	0	multi-exon	FALSE	canonical	3	2723	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGGGTCGTGGTGTCTT	33	True	NA	-10	True	AATAAA	-13	NA	1772698	1771895	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1772514_1772603
H1_mix_00033938	chr16	-	1787	4	FSM	ENSG00000162032.16	ENST00000569380.5	1781	4	0	-6	0	0	multi-exon	FALSE	canonical	3	234	junction_3	101.6267681273	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGCGTGAGCTGAAACGT	1	True	NA	-2	True	AATAAA	-25	NA	1782552	1776711	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1777444_1777746_1778613_1781357_1781496_1782501
H1_mix_00033941	chr16	-	1187	7	NIC	ENSG00000162032.16	novel	1535	7	NA	NA	15	-391	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	146.674242228598	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTCCGATCCCCAGGCA	21	True	NA	NA	False	NA	NA	NA	1782532	1777185	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_1777444_1777746_1777873_1777945_1778049_1778133_1778322_1778434_1778613_1781192_1781496_1782501
H1_mix_00033948	chr16	-	1298	5	NNC	ENSG00000198736.13	novel	550	5	NA	NA	0	70774	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	142.037847069012	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTTCAGCAGTAGCAAT	2	True	NA	NA	False	ATTAAA	-4	NA	1943195	1867454	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_1867492_1938240_1939144_1940777_1940893_1941256_1941406_1943101
H1_mix_00033949	chr16	-	885	2	FSM	ENSG00000162040.7	ENST00000454677.3	1236	2	292	59	292	-59	multi-exon	FALSE	canonical	1	2	junction_1	0	157	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTGCGTGCACATGCTGG	292	False	NA	NA	False	NA	NA	NA	1918123	1911533	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1912206_1917910
H1_mix_00033950	chr16	-	847	3	FSM	ENSG00000198736.13	ENST00000399753.2	847	3	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_2	14	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGCAGGGCGCAGTGGTT	2	True	NA	-84	True	NA	NA	NA	1943195	1939018	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1939144_1940777_1941406_1943101
H1_mix_00033951	chr16	-	550	5	FSM	ENSG00000198736.13	ENST00000564908.1	550	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	156.814380718096	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCCAGACGGCCACCACAC	-2	True	NA	NA	False	AAGAAA	-41	NA	1943199	1939094	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1939144_1940777_1940893_1941028_1941168_1941256_1941406_1943101
H1_mix_00033952	chr16	-	878	3	FSM	ENSG00000140988.16	ENST00000526586.6	878	3	0	0	0	0	multi-exon	FALSE	canonical	3	47622	junction_2	1048	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGTTTTTTTCCCGTGT	1565	False	NA	-27	True	AATAAA	-15	NA	1963256	1962060	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1962657_1962735_1962910_1963148
H1_mix_00033955	chr16	-	265	1	FSM	ENSG00000277602.1	ENST00000618631.1	242	1	-25	2	-25	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTCATGTATTGAGCACC	9547	False	NA	NA	False	AATAAA	-17	NA	1971921	1971656	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1971700_1971900
H1_mix_00033956	chr16	-	4458	7	FSM	ENSG00000167962.15	ENST00000565396.5	4457	7	1	-2	1	1	multi-exon	FALSE	canonical	3	171	junction_5	19.7821468332771	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGTGTTCTGAGCTTCT	22	False	NA	-15	True	AATAAA	-23	NA	2009794	1997652	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1999122_1999495_2000482_2001003_2001192_2001582_2001701_2002205_2002424_2002520_2003729_2009523
H1_mix_00033957	chr16	-	3456	11	NIC	ENSG00000167962.15	novel	3362	12	NA	NA	1	-1	intron_retention	FALSE	canonical	3	136	junction_3	23.6211769393483	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTGGTGTTCTGAGCT	22	False	NA	-18	True	AATAAA	-20	NA	2009794	1997655	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_1998853_1998964_1999122_1999495_2000257_2000390_2000482_2001003_2001192_2001582_2001701_2002205_2002424_2002520_2002733_2002990_2003121_2003615_2003729_2009523
H1_mix_00033960	chr16	-	564	2	FSM	ENSG00000065057.9	ENST00000561862.5	564	2	0	0	0	0	multi-exon	FALSE	canonical	3	664	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGATCTGGCTGATGTC	7362	False	NA	-7	True	AATAAA	-18	NA	2040468	2039819	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2040048_2040132
H1_mix_00033962	chr16	-	9698	34	NNC	ENSG00000008710.20	novel	14135	46	NA	NA	-10	-413	intron_retention	TRUE	non_canonical	0	0	junction_18	26.1658551224365	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGACGTCTACCAGCTGGA	NA	False	NA	NA	False	NA	NA	NA	2113290	2089939	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_2090195_2090284_2090591_2090673_2090809_2090883_2091175_2091422_2091598_2091780_2091907_2092046_2092189_2092479_2092593_2093543_2093739_2093810_2094014_2094091_2094211_2097147_2097242_2097318_2097504_2097727_2097778_2097867_2097985_2099643_2099771_2099860_2100072_2100165_2100312_2100400_2100567_2102060_2102257_2102380_2102634_2102813_2102971_2103265_2103896_2104497_2104643_2105321_2105475_2105864_2106025_2106090_2106305_2106397_2106678_2106804_2106949_2107882_2108033_2108251_2111872_2112339_2112474_2112787_2112964_2113160
H1_mix_00033966	chr16	-	305	1	Genic_Genomic	ENSG00000008710.20	novel	NA	NA	NA	NA	875	119	mono-exon	FALSE	NA	NA	NA	NA	NA	6948	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCCCATTCATACGGAAA	NA	False	NA	NA	False	AATACA	-13	NA	2099018	2098713	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr16_-_2098700_2099000
H1_mix_00033971	chr16	-	826	6	FSM	ENSG00000182685.8	ENST00000328540.8	826	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	9.95991967839099	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGGTGGTGTTCTCTA	-6	True	NA	-18	True	AATAAA	-15	NA	2210863	2209252	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2209457_2209552_2209707_2209949_2210052_2210125_2210282_2210521_2210651_2210782
H1_mix_00033972	chr16	-	4125	7	Fusion	ENSG00000182685.8_ENSG00000184207.9	novel	826	6	NA	NA	0	-70	intron_retention	FALSE	canonical	3	21	junction_5	558.140265126568	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGCATCGACATCTGCT	-28	True	NA	NA	False	NA	NA	NA	2214840	2209431	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr16_-_2209457_2209552_2209707_2209949_2210282_2210521_2210651_2210782_2213092_2213580_2214054_2214137
H1_mix_00033974	chr16	-	555	3	FSM	ENSG00000182685.8	ENST00000566018.1	555	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCGGCTGCTGGTGGAT	3907	False	NA	NA	False	NA	NA	NA	2210905	2209978	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2210282_2210521_2210651_2210782
H1_mix_00033975	chr16	-	2267	3	NIC	ENSG00000184207.9	novel	3164	2	NA	NA	12	-152	intron_retention	FALSE	canonical	3	12	junction_1	766	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGAGCAGAGCTCAGAAGT	-16	True	NA	NA	False	NA	NA	NA	2214828	2211744	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_2212848_2213580_2214054_2214137
H1_mix_00033976	chr16	-	1037	8	NNC	ENSG00000167969.13	novel	1507	7	NA	NA	0	20556	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	379.701708917806	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCGGGCGCGGTGGCTCA	-3	True	NA	NA	False	AAAAAG	-1	NA	2251587	2218845	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_2218874_2239899_2240146_2243045_2243225_2243317_2243440_2244405_2244553_2246858_2246987_2251315_2251430_2251514
H1_mix_00033977	chr16	-	1325	7	FSM	ENSG00000167969.13	ENST00000570258.5	1512	7	187	0	187	0	multi-exon	FALSE	canonical	0	0	junction_6	409.342155170952	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTCCCAGGGAGGTCTT	1144	False	NA	-75	True	AAAAAG	-45	NA	2252113	2239939	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2240146_2243045_2243225_2243317_2243440_2244405_2244553_2246858_2246987_2251315_2251430_2251684
H1_mix_00033981	chr16	-	4946	7	FSM	ENSG00000205937.12	ENST00000565870.5	1514	7	-2583	-849	0	0	multi-exon	FALSE	canonical	3	1718	junction_6	503.060522093405	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAATCTAGTTCTGGGTT	1013	False	NA	69	True	AATAAA	-14	NA	2267833	2253125	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2254064_2255584_2255727_2262277_2262432_2262739_2262843_2263095_2263288_2264175_2264332_2264572
H1_mix_00033989	chr16	-	3895	1	FSM	ENSG00000269937.1	ENST00000569852.1	3626	1	-64	-205	-64	205	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTGTTTCCAGAAGCTT	NA	False	NA	NA	False	AAAACA	-11	NA	2565160	2561265	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2561300_2565200
H1_mix_00033990	chr16	-	5790	3	FSM	ENSG00000260565.8	ENST00000671018.1	5775	3	0	-15	0	15	multi-exon	FALSE	canonical	2	3	junction_2	1.5	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCTTTACATCACCACCAA	-10	True	NA	NA	False	AAGAAA	-24	NA	2673421	2667072	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2672571_2672706_2672860_2673282
H1_mix_00033992	chr16	-	1282	5	FSM	ENSG00000172382.10	ENST00000565903.5	1297	5	0	15	0	-15	multi-exon	FALSE	canonical	1	3	junction_3	5.40832691319598	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGCCTGTGTGCCAGCT	NA	False	NA	-23	True	AATAAA	-2	NA	2720551	2712438	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2712815_2713528_2713699_2714064_2714337_2716499_2716527_2720114
H1_mix_00033993	chr16	-	1027	5	FSM	ENSG00000005001.10	ENST00000571228.1	1037	5	0	10	0	2	multi-exon	FALSE	canonical	0	0	junction_2	3.74165738677394	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTCCAGTGTCTGTTT	496	False	NA	-15	True	AATAAA	-5	NA	2858154	2852739	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2853330_2853864_2854023_2856133_2856254_2856821_2856849_2858022
H1_mix_00033994	chr16	-	1381	6	FSM	ENSG00000005001.10	ENST00000161006.8	1383	6	0	2	0	-2	multi-exon	FALSE	canonical	2	3	junction_3	2.65329983228432	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCTGTTTTTTCCCAT	-1	True	NA	-7	True	AATAAA	-13	NA	2858170	2852731	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2853330_2853864_2854023_2855573_2855852_2856081_2856254_2856821_2856849_2858022
H1_mix_00033995	chr16	-	1417	4	NNC	ENSG00000184697.7	novel	1366	2	NA	NA	0	61348	intron_retention	TRUE	non_canonical	0	0	junction_1	1911.54533180763	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAAATTAGCCGGGGGTG	0	True	NA	NA	False	TATAAA	-31	NA	3018183	2953363	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_2953390_2999479_2999505_3014711_3016043_3018148
H1_mix_00033996	chr16	-	929	5	FSM	ENSG00000127564.17	ENST00000575981.1	910	5	0	-19	0	0	multi-exon	TRUE	canonical	3	474	junction_4	45.4993131816295	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGCCCTTCCTGTCCCTT	7383	False	NA	-6	True	AATAAA	-45	NA	2974795	2972790	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2973065_2973137_2973216_2973999_2974158_2974244_2974418_2974549
H1_mix_00033999	chr16	-	1199	3	FSM	ENSG00000103145.11	ENST00000576921.1	1199	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	259	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTCAGTCTGGAACCTGG	2	True	NA	-27	True	AATAAA	-19	NA	3024269	3022624	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3022999_3023232_3023969_3024180
H1_mix_00034000	chr16	-	828	4	FSM	ENSG00000103145.11	ENST00000573095.1	828	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	211.54826084529	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTTCAGTCTGGAACCTG	4618	False	NA	-28	True	AATAAA	-18	NA	3024215	3022625	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3022999_3023232_3023531_3023846_3023969_3024180
H1_mix_00034002	chr16	-	420	3	FSM	ENSG00000261971.9	ENST00000572930.5	420	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	9	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGCCCAGCTCCGACAGCA	3313	False	NA	NA	False	NA	NA	NA	3056019	3053579	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3053623_3054939_3055033_3055735
H1_mix_00034003	chr16	-	1050	4	FSM	ENSG00000261971.9	ENST00000572574.5	794	4	62	-318	0	247	multi-exon	FALSE	canonical	3	10	junction_2	6.18241233033047	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCGTACATCCATCCCTG	24	True	NA	NA	False	NA	NA	NA	3059308	3054668	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3055033_3055735_3055946_3058539_3058703_3058995
H1_mix_00034004	chr16	-	560	2	FSM	ENSG00000261971.9	ENST00000572427.1	560	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCCCTCCAGCTGCCGGT	24	True	NA	NA	False	NA	NA	NA	3059308	3058455	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3058703_3058995
H1_mix_00034005	chr16	-	2350	5	FSM	ENSG00000130182.8	ENST00000538082.5	2350	5	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	205.984677828231	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCCACTTTCACAGCTG	-5	True	NA	-130	True	NA	NA	NA	3099295	3088988	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3090647_3091539_3091598_3091763_3091829_3092541_3093005_3099189
H1_mix_00034006	chr16	-	1726	4	FSM	ENSG00000130182.8	ENST00000571903.5	1726	4	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_3	140.741686156669	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCCGCACGCCTGCCACC	6054	False	NA	NA	False	NA	NA	NA	3093236	3090231	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3090647_3091539_3091598_3091763_3091829_3092048
H1_mix_00034009	chr16	-	2458	2	FSM	ENSG00000263072.9	ENST00000570901.3	1281	2	-1209	32	684	-31	multi-exon	FALSE	canonical	3	5	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTTCCCTGACAATGAAG	3493	False	NA	-39	True	NA	NA	NA	3131369	3125630	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3125967_3129247
H1_mix_00034010	chr16	-	1804	5	FSM	ENSG00000263072.9	ENST00000659227.1	1906	5	0	102	0	-31	multi-exon	TRUE	canonical	3	5	junction_1	18.6145104689863	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTTCCCTGACAATGAAG	9983	False	NA	-39	True	NA	NA	NA	3133704	3125630	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3125967_3129247_3129311_3129460_3129654_3131746_3132104_3132849
H1_mix_00034011	chr16	-	1489	4	FSM	ENSG00000263072.9	ENST00000573447.2	1489	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	19.0262975904404	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATATATTAAATTTTCC	-11	True	NA	-33	True	NA	NA	NA	3134873	3128861	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3129654_3131746_3132104_3132849_3132946_3134629
H1_mix_00034013	chr16	-	304	1	FSM	ENSG00000261889.1	ENST00000570843.1	748	1	535	-91	535	91	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAATAAAAATTATGTATG	1795	False	NA	NA	False	AAAAAG	-12	NA	3156948	3156644	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3156600_3156900
H1_mix_00034014	chr16	-	3008	5	FSM	ENSG00000010539.12	ENST00000414144.7	3008	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	17.5552698640608	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGCCTATTGGTCTTTT	9	True	NA	-16	True	NA	NA	NA	3235158	3222324	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3224614_3232420_3232548_3232832_3232922_3233505_3233837_3234986
H1_mix_00034015	chr16	-	3645	2	FSM	ENSG00000140993.11	ENST00000572297.1	594	2	-389	-2662	-30	-24	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTGTGTTTCTTTAAA	-29	True	NA	-23	True	TATAAA	-20	NA	3305460	3298831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3302010_3304993
H1_mix_00034016	chr16	-	3658	5	FSM	ENSG00000140987.21	ENST00000571906.1	906	5	0	-2752	0	-3	multi-exon	FALSE	canonical	3	6	junction_3	21.6029511872799	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTCCTTGGCCTTTGGT	15	True	NA	-7	True	AATAAA	-14	NA	3400976	3382087	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3384942_3390009_3390134_3390422_3390518_3397191_3397745_3400944
H1_mix_00034017	chr16	-	3458	3	NIC	ENSG00000140987.21	novel	2441	4	NA	NA	0	-3	intron_retention	FALSE	canonical	3	23	junction_1	21.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTCCTTGGCCTTTGGT	-4	True	NA	-7	True	AATAAA	-14	NA	3400995	3382087	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_3384942_3397191_3397745_3400944
H1_mix_00034020	chr16	-	3218	1	FSM	ENSG00000263235.1	ENST00000570409.1	1068	1	-2182	32	-2182	-32	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTACTTATTTAATAAATGG	NA	False	NA	NA	False	NA	NA	NA	3653885	3650667	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3650700_3653900
H1_mix_00034022	chr16	-	2311	13	FSM	ENSG00000126602.11	ENST00000575671.5	2309	13	0	-2	0	1	multi-exon	FALSE	canonical	3	1360	junction_11	138.08941849396	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTGGGCTTTTTTTC	82	False	NA	-4	True	TTTAAA	-19	NA	3678304	3658035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3658231_3658792_3658866_3661986_3662133_3662881_3662968_3663423_3663563_3664273_3664460_3665970_3666119_3671721_3671792_3672699_3672821_3674338_3674495_3675323_3675398_3676035_3676146_3677497
H1_mix_00034026	chr16	-	681	6	FSM	ENSG00000162104.10	ENST00000576936.5	697	6	0	16	0	-16	multi-exon	FALSE	canonical	2	2	junction_1	19.5079470985545	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTCAATTACCAAAACGAG	NA	False	NA	NA	False	ATTAAA	-14	NA	3989000	3953402	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3953517_3974668_3974711_3977481_3977631_3979115_3979276_3983231_3983441_3988993
H1_mix_00034029	chr16	-	1757	4	FSM	ENSG00000090447.12	ENST00000574639.1	595	4	-159	-1003	22	0	multi-exon	FALSE	canonical	3	8	junction_3	32.4276973520408	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGAGTCTCCTGGGTG	-13	True	NA	-5	True	AATAAA	-20	NA	4273053	4257185	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4258250_4260089_4260246_4260454_4260596_4272657
H1_mix_00034030	chr16	-	1304	4	FSM	ENSG00000090447.12	ENST00000575300.1	1326	4	22	0	22	0	multi-exon	FALSE	canonical	3	69	junction_3	2.86744175568088	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGAGAAGCTGGAGCGGG	-13	True	NA	NA	False	NA	NA	NA	4273053	4260497	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4260596_4261778_4262423_4262535_4262702_4272657
H1_mix_00034033	chr16	-	3287	31	FSM	ENSG00000103426.12	ENST00000572467.5	3284	31	0	-3	0	3	multi-exon	FALSE	canonical	2	8	junction_4	186.745129342999	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTTTGCATGTGTCCAGA	-3	True	NA	-6	True	AATAAA	-17	NA	4416587	4340247	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4340406_4340919_4340986_4341367_4341505_4343206_4343292_4355285_4355373_4357167_4357260_4357967_4358104_4358366_4358484_4359295_4359386_4359479_4359622_4360277_4360364_4360443_4360549_4360942_4361086_4361161_4361249_4361360_4361470_4361984_4362161_4362611_4362739_4364275_4364414_4364596_4364690_4364774_4364921_4365002_4365061_4365490_4365546_4387985_4388069_4388544_4388632_4395288_4395340_4405490_4405568_4407500_4407685_4408180_4408252_4412355_4412431_4413307_4413405_4416458
H1_mix_00034036	chr16	-	1955	1	FSM	ENSG00000280063.1	ENST00000624337.1	1955	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTCAGAGAGGTTGAGTA	2663	False	NA	NA	False	AATAAA	-34	NA	4348648	4346693	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4346700_4348600
H1_mix_00034046	chr16	-	2641	1	FSM	ENSG00000153443.13	ENST00000590891.1	2641	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGGCTCTGTGGTCTTA	3511	False	NA	-5	True	NA	NA	NA	4611523	4608882	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4608900_4611500
H1_mix_00034048	chr16	-	3098	15	FSM	ENSG00000168096.15	ENST00000591653.5	3098	15	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_14	38.8156948059069	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAAGGGCTCAGTTCTGG	9889	False	NA	-10	True	AATAAA	-15	NA	4728078	4696511	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4696897_4697016_4697105_4697332_4697417_4697976_4698063_4698426_4698600_4698799_4698942_4699051_4699177_4700969_4701135_4701433_4701544_4702101_4702243_4705094_4705254_4714050_4714187_4724749_4724832_4726658_4726781_4726978
H1_mix_00034049	chr16	-	2460	17	NIC	ENSG00000168096.15	novel	2772	18	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	28	junction_14	39.2897887497502	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGAAGGGCTCAGTTCTG	4	True	NA	-11	True	AATAAA	-14	NA	4734247	4696512	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_4696897_4697016_4697105_4697332_4697417_4697976_4698063_4698426_4698600_4698799_4698942_4699051_4699177_4700969_4701135_4701433_4701544_4702101_4702243_4705094_4705254_4714050_4714187_4724749_4724832_4726658_4726781_4726978_4727178_4729979_4730152_4734155
H1_mix_00034054	chr16	-	3735	17	NNC	ENSG00000140632.17	novel	3718	16	NA	NA	0	27397	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	205.72432061803	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCGGGCATGGTGGTAC	9	True	NA	NA	False	NA	NA	NA	4847279	4775805	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_4775832_4803202_4805311_4811169_4811295_4811622_4811803_4812085_4812249_4813736_4813839_4814536_4814648_4817597_4817698_4821379_4821454_4821546_4821598_4822874_4822932_4823820_4823908_4831978_4832222_4832773_4832913_4845073_4845154_4846173_4846211_4847227
H1_mix_00034055	chr16	-	2693	7	FSM	ENSG00000067836.13	ENST00000591292.5	2684	7	0	-9	0	8	multi-exon	TRUE	canonical	3	392	junction_2	24.7975133161909	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCTGTCTGTCTGAGT	7	True	NA	2	True	AATAAA	-24	NA	4802162	4796959	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4797502_4797713_4797841_4797937_4797988_4798070_4798185_4798568_4798668_4799685_4799782_4800497
H1_mix_00034056	chr16	-	1420	11	NNC	ENSG00000067836.13	novel	1418	11	NA	NA	1	8	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_10	128.99864340372	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCTGTCTGTCTGAGT	-8	True	NA	2	True	AATAAA	-24	NA	4802879	4796959	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_4797502_4797713_4797841_4797937_4797988_4798070_4798185_4798568_4798668_4799685_4799782_4800497_4800579_4801266_4801322_4801502_4801586_4802381_4802454_4802778
H1_mix_00034065	chr16	-	2838	1	FSM	ENSG00000275056.1	ENST00000614098.1	1091	1	-1138	-609	-1138	609	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTGGGCAACAGAGTGAG	5816	False	NA	NA	False	NA	NA	NA	4841472	4838634	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4838600_4841500
H1_mix_00034066	chr16	-	2708	4	FSM	ENSG00000103174.13	ENST00000564397.5	3286	4	599	-21	-441	-7	multi-exon	FALSE	canonical	3	55	junction_3	1.24721912892465	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAATCATGGACTTAGG	4372	False	NA	-5	True	AATAAA	-38	NA	5029559	5024850	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_5025686_5027134_5027380_5027845_5027894_5027979
H1_mix_00034070	chr16	-	456	4	FSM	ENSG00000153446.16	ENST00000592343.1	456	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	4.89897948556636	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAATGAAAATACCCAAGGG	7410	False	NA	NA	False	AAAACA	-9	NA	5058620	5047877	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_5047965_5055245_5055351_5056052_5056189_5058492
H1_mix_00034071	chr16	-	962	6	FSM	ENSG00000118894.15	ENST00000587133.1	873	6	-53	-36	0	0	multi-exon	FALSE	canonical	3	13	junction_4	135.326272393796	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTTTGGAGAATGTTAAT	-1	True	NA	NA	False	GATAAA	-17	NA	5097795	5085535	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_5085733_5089106_5089257_5090083_5090350_5090431_5090566_5095451_5095515_5097643
H1_mix_00034076	chr16	-	804	5	NNC	ENSG00000153048.11	novel	2833	5	NA	NA	-19	39095	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1127.82689274551	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCTGGCCCAAAGCTGGG	149	False	NA	NA	False	AAAAAG	-11	NA	8869031	8813846	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_8813883_8854912_8855327_8858349_8858473_8859170_8859336_8868965
H1_mix_00034077	chr16	-	308	2	Antisense	novelGene_ENSG00000140650.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	499	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCTGAAGTAACTGAAGAT	9415	False	NA	NA	False	NA	NA	NA	8838643	8833403	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr16_-_8833611_8838542
H1_mix_00034078	chr16	-	448	3	FSM	ENSG00000187555.16	ENST00000567113.5	448	3	0	0	0	0	multi-exon	FALSE	canonical	2	425	junction_2	79	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCCGTTTTTGCTGAGGA	NA	False	NA	NA	False	NA	NA	NA	8897254	8895058	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_8895151_8895641_8895742_8896998
H1_mix_00034079	chr16	-	648	4	FSM	ENSG00000187555.16	ENST00000569448.1	698	4	0	50	0	-50	multi-exon	FALSE	canonical	3	543	junction_3	41.8807831827438	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCCATGGTGATTCATTA	NA	False	NA	NA	False	ATTAAA	-41	NA	8901219	8899356	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_8899758_8900529_8900631_8900989_8901058_8901141
H1_mix_00034081	chr16	-	577	2	FSM	ENSG00000183454.18	ENST00000637393.1	833	2	0	256	0	172	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCGATGCACACCTTGCAC	3473	False	NA	NA	False	NA	NA	NA	10180003	9937980	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_9938552_10179997
H1_mix_00034082	chr16	-	238	1	FSM	ENSG00000279662.1	ENST00000624925.1	4439	1	4290	-89	4290	89	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATGAAGGAGGTCTTGT	NA	False	NA	NA	False	NA	NA	NA	10445457	10445219	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_10445200_10445500
H1_mix_00034083	chr16	-	715	2	FSM	ENSG00000263080.1	ENST00000572913.1	714	2	0	-1	0	1	multi-exon	FALSE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGTCTGTGTCTATCT	NA	False	NA	NA	False	CATAAA	-2	NA	11345211	11341807	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11342424_11345112
H1_mix_00034084	chr16	-	2085	11	FSM	ENSG00000188897.9	ENST00000599216.5	2085	11	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_9	3.71618083521241	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACATGTCTCTAGATTGCT	NA	False	NA	-4	True	AATAAA	-16	NA	11392065	11372014	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11372739_11383641_11383784_11383885_11384009_11384215_11384326_11384887_11385066_11385210_11385417_11387110_11387296_11390104_11390203_11390278_11390464_11391783_11391862_11392009
H1_mix_00034085	chr16	-	301	2	FSM	ENSG00000188897.9	ENST00000600877.1	401	2	100	0	100	0	multi-exon	FALSE	canonical	2	3	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACCTGGTGGTCAGCGTG	NA	False	NA	NA	False	NA	NA	NA	11457039	11450700	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11450821_11456858
H1_mix_00034086	chr16	-	2217	5	NNC	ENSG00000189067.14	novel	2292	5	NA	NA	0	9329	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	487.389218181937	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCAGGCGCGGTGGCTCA	5	True	NA	NA	False	TTTAAA	-28	NA	11586941	11538392	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_11538423_11547996_11549746_11553532_11553690_11556510_11556736_11586885
H1_mix_00034090	chr16	-	3921	23	NIC	ENSG00000122299.12	novel	3805	23	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_21	95.9521338140589	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCTTTCATTTTTTCCT	17	True	NA	-11	True	AATAAA	-14	NA	11797216	11750596	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_11751507_11752668_11752833_11756236_11756371_11758430_11758540_11761405_11761512_11761909_11762044_11762670_11762748_11763477_11763660_11765052_11765154_11765488_11765686_11767416_11767579_11768314_11768502_11769030_11769096_11770782_11770988_11774235_11774520_11774979_11775014_11776451_11776533_11776750_11776910_11779165_11779364_11781424_11781465_11782286_11782389_11796218_11796416_11797123
H1_mix_00034091	chr16	-	401	3	FSM	ENSG00000122299.12	ENST00000570862.1	415	3	14	0	14	0	multi-exon	FALSE	canonical	3	251	junction_2	17	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAAAAGTGAAGACATAG	NA	False	NA	NA	False	NA	NA	NA	11761648	11756321	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11756371_11758430_11758540_11761405
H1_mix_00034092	chr16	-	780	5	FSM	ENSG00000122299.12	ENST00000575041.5	780	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	125.557755634608	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGGGAATTTATATTCC	9342	False	NA	NA	False	NA	NA	NA	11774292	11765516	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11765686_11767416_11767579_11768314_11768502_11770782_11770988_11774235
H1_mix_00034098	chr16	-	1939	10	NNC	ENSG00000171490.13	novel	5440	9	NA	NA	0	30149	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	749.169779172045	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGACAGAGAAGAAAAAAAG	21	True	NA	NA	False	AAAAAG	-2	NA	11851516	11803700	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_11803730_11837353_11838114_11839694_11839986_11841694_11841821_11841906_11842001_11846500_11846603_11846694_11846844_11847667_11847807_11850278_11850419_11851407
H1_mix_00034099	chr16	-	1978	10	NNC	ENSG00000171490.13	novel	5440	9	NA	NA	0	30147	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	749.169779172045	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAGACAGAGAAGAAAAAA	-5	True	NA	NA	False	NA	NA	NA	11851542	11803702	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_11803730_11837338_11838114_11839694_11839986_11841694_11841821_11841906_11842001_11846500_11846603_11846694_11846844_11847667_11847807_11850278_11850419_11851407
H1_mix_00034100	chr16	-	1980	10	NNC	ENSG00000171490.13	novel	5440	9	NA	NA	0	30149	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	749.169779172045	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGACAGAGAAGAAAAAAAG	-7	True	NA	NA	False	AAAAAG	-2	NA	11851544	11803700	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_11803730_11837340_11838114_11839694_11839986_11841694_11841821_11841906_11842001_11846500_11846603_11846694_11846844_11847667_11847807_11850278_11850419_11851407
H1_mix_00034101	chr16	-	2015	10	NNC	ENSG00000171490.13	novel	5440	9	NA	NA	0	30149	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	749.169779172045	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGACAGAGAAGAAAAAAAG	-4	True	NA	NA	False	AAAAAG	-2	NA	11851580	11803700	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_11803729_11837340_11838114_11839694_11839986_11841694_11841821_11841906_11842001_11846500_11846603_11846694_11846844_11847667_11847807_11850278_11850419_11851407
H1_mix_00034102	chr16	-	7161	16	NNC	ENSG00000103342.13	novel	7141	15	NA	NA	0	36558	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	586.920376958314	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAGGATCACATTGTA	-1	True	NA	NA	False	AAAAAG	-13	NA	11915956	11831569	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_11831596_11868130_11873172_11875760_11875930_11876085_11876176_11877406_11877581_11883014_11883096_11885180_11885275_11886470_11886612_11886776_11886932_11887569_11887751_11891061_11891140_11894953_11894988_11896557_11896783_11897839_11897882_11897993_11898036_11915368
H1_mix_00034103	chr16	-	4716	10	NNC	ENSG00000171490.13	novel	5440	9	NA	NA	0	-451	at_least_one_novel_splicesite	FALSE	non_canonical	1	4	junction_1	747.963523240783	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTACTGTACTGAAAAATGG	-4	True	NA	-12	True	AATAAA	-19	NA	11851580	11834300	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_11835003_11835313_11838114_11839694_11839986_11841694_11841821_11841906_11842001_11846500_11846603_11846694_11846844_11847667_11847807_11850278_11850419_11851407
H1_mix_00034106	chr16	-	1923	1	FSM	ENSG00000261560.1	ENST00000568144.1	1495	1	-445	17	-445	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCGTCTCTACTAAAAATAC	9491	False	NA	NA	False	NA	NA	NA	11883014	11881091	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11881100_11883000
H1_mix_00034109	chr16	-	1090	1	FSM	ENSG00000242307.1	ENST00000463867.1	348	1	-623	-119	-623	119	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGTAATTAAATCTGAAGG	NA	False	NA	NA	False	AAAAAG	-40	NA	13923302	13922212	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_13922200_13923300
H1_mix_00034110	chr16	-	389	3	Antisense	novelGene_ENSG00000201075.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	14.5	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTAATTTGTTCTTTGG	3	True	NA	NA	False	AATAAA	-7	NA	14283969	14251841	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr16_-_14252007_14255987_14256104_14283861
H1_mix_00034111	chr16	-	3075	25	NNC	ENSG00000140694.17	novel	2552	25	NA	NA	0	36934	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	102.425167466573	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGGAGCAGCTAGATTTG	1	True	NA	NA	False	NA	NA	NA	14630235	14398765	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_14398796_14435701_14436773_14446887_14447082_14482637_14482828_14552020_14552096_14554064_14554152_14555653_14555710_14580873_14580944_14582180_14582292_14584346_14584423_14584748_14584792_14586317_14586362_14593300_14593379_14599903_14599961_14604145_14604227_14606483_14606527_14608280_14608320_14609057_14609124_14610643_14610810_14617589_14617651_14627105_14627188_14627268_14627337_14628171_14628252_14629596_14629675_14630106
H1_mix_00034113	chr16	-	2100	24	FSM	ENSG00000140694.17	ENST00000341484.11	2100	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	104.369110148162	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAACCAAGTTGTCTCCTG	3	True	NA	NA	False	NA	NA	NA	14630276	14436604	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_14436773_14446887_14447082_14482637_14482828_14552020_14552096_14554064_14554152_14555653_14555710_14580873_14580944_14582180_14582292_14584346_14584423_14584748_14584792_14586317_14586362_14593300_14593379_14599903_14599961_14604145_14604227_14606483_14606527_14608280_14608320_14609057_14609124_14610643_14610810_14617589_14617651_14627105_14627188_14627268_14627337_14628171_14628252_14629596_14629675_14630189
H1_mix_00034114	chr16	-	2877	23	FSM	ENSG00000140694.17	ENST00000651049.1	2879	23	0	2	0	-2	multi-exon	FALSE	canonical	0	0	junction_20	104.449046457041	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGGTTTCTGATGCTTT	28	True	NA	NA	False	AATAAA	-13	NA	14630208	14460710	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_14461835_14482637_14482828_14552020_14552096_14554064_14554152_14555653_14555710_14580873_14580944_14582180_14582292_14584346_14584423_14584748_14584792_14586317_14586362_14593300_14593379_14599903_14599961_14604145_14604227_14606483_14606527_14608280_14608320_14609057_14609124_14610643_14610810_14617589_14617651_14627105_14627188_14627268_14627337_14628171_14628252_14629596_14629675_14630106
H1_mix_00034117	chr16	-	2822	1	FSM	ENSG00000207425.1	ENST00000384694.1	100	1	-1659	-1063	-1659	1063	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGAGGTTGCCATGAGCCG	NA	False	NA	NA	False	NA	NA	NA	14917215	14914393	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_14914400_14917200
H1_mix_00034118	chr16	-	1263	1	FSM	ENSG00000275910.1	ENST00000617759.1	563	1	-723	23	-723	-23	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATATTCAAATCTCCCAC	NA	False	NA	NA	False	NA	NA	NA	15017113	15015850	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_15015800_15017100
H1_mix_00034119	chr16	-	1049	8	FSM	ENSG00000157045.9	ENST00000622833.4	1049	8	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_7	252.971967471755	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTGAGACTTATTTTT	-5	True	NA	-1	True	AATAAA	-20	NA	15056079	15037853	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_15038211_15038573_15038688_15039968_15040067_15041067_15041122_15041622_15041677_15044333_15044408_15047441_15047551_15055890
H1_mix_00034120	chr16	-	439	6	FSM	ENSG00000157045.9	ENST00000568738.1	439	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	328.579001154973	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAAACACCCATC	8616	False	NA	NA	False	NA	NA	NA	15047494	15038144	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_15038211_15038573_15038688_15039968_15040067_15041067_15041122_15041622_15041677_15047441
H1_mix_00034121	chr16	-	738	9	FSM	ENSG00000157045.9	ENST00000566419.1	738	9	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_7	256.920221080397	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGAGAGTTTACAGGCTG	-26	True	NA	NA	False	NA	NA	NA	15056039	15038575	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_15038688_15039968_15040067_15041067_15041122_15041622_15041677_15044333_15044408_15047441_15047551_15047854_15047921_15048077_15048100_15055890
H1_mix_00034122	chr16	-	354	5	FSM	ENSG00000157045.9	ENST00000563940.1	354	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	337.911508386441	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTCCTGCCATTTGCCC	193	False	NA	NA	False	NA	NA	NA	15055917	15041622	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_15041677_15044333_15044408_15047417_15047551_15047854_15047921_15055890
H1_mix_00034123	chr16	-	339	4	FSM	ENSG00000157045.9	ENST00000567420.1	339	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	347.347088659168	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCATAGGTGAATTGAG	11	True	NA	NA	False	CATAAA	-45	NA	15055787	15047427	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_15047551_15047854_15047921_15047996_15048100_15055740
H1_mix_00034125	chr16	-	4425	16	NIC	ENSG00000270580.5	novel	2902	18	NA	NA	-109	22	intron_retention	FALSE	canonical	3	85	junction_15	67.5808651419419	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACAGCTGAAACTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	15131710	15104700	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_15104759_15106114_15106151_15106259_15106321_15107329_15107438_15110413_15110559_15110721_15110822_15114442_15114572_15118925_15119055_15125690_15127597_15127686_15127898_15127991_15128136_15128221_15128390_15129881_15130078_15130201_15130455_15130634_15130792_15131086
H1_mix_00034126	chr16	-	2828	18	NNC	ENSG00000270580.5	novel	2902	18	NA	NA	-109	22	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_15	89.8886662396272	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACAGCTGAAACTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	15131710	15104700	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_15104759_15105548_15105619_15106114_15106151_15106259_15106321_15107329_15107438_15110413_15110559_15110721_15110822_15114442_15114572_15118925_15119055_15125690_15125808_15127469_15127597_15127686_15127898_15127991_15128136_15128221_15128390_15129881_15130078_15130219_15130455_15130634_15130792_15131073
H1_mix_00034127	chr16	-	3824	13	NNC	ENSG00000250251.6	novel	4769	24	NA	NA	-247	0	intron_retention	FALSE	canonical	3	37	junction_1	74.3785363304943	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGATGGCCCCACATGCTC	NA	False	NA	NA	False	NA	NA	NA	15154811	15132719	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_15132874_15133263_15133424_15133489_15133704_15133794_15134075_15134201_15134346_15135029_15135202_15135279_15135430_15135648_15136751_15136868_15137541_15137753_15137924_15138191_15138264_15138384_15138457_15154349
H1_mix_00034128	chr16	-	3078	14	NNC	ENSG00000250251.6	novel	4769	24	NA	NA	-247	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_8	76.0724506735473	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCACGAGCGGCAGCGC	NA	False	NA	NA	False	NA	NA	NA	15154811	15132842	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_15133062_15133263_15133424_15133489_15133704_15133794_15134075_15134201_15134346_15135029_15135202_15135279_15135430_15135648_15135756_15136566_15136751_15136868_15137541_15137753_15137924_15138191_15138264_15138384_15138457_15154349
H1_mix_00034129	chr16	-	1025	8	FSM	ENSG00000183793.14	ENST00000360151.9	1084	8	0	59	0	-59	multi-exon	FALSE	canonical	0	0	junction_7	120.30539370744	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGCGGATGATAATCTCAA	36	False	NA	NA	False	NA	NA	NA	15378294	15363686	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_15364070_15365428_15365465_15365573_15365635_15366652_15366761_15369711_15369857_15370019_15370120_15373714_15373844_15378231
H1_mix_00034130	chr16	-	699	8	FSM	ENSG00000183793.14	ENST00000543801.5	699	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	130.816587602019	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACTTCTTGAGGTAAGAT	36	False	NA	NA	False	AAGAAA	-19	NA	15378294	15364875	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_15364933_15365428_15365465_15365573_15365635_15366652_15366761_15369711_15369857_15370019_15370120_15373714_15373844_15378231
H1_mix_00034132	chr16	-	419	3	FSM	ENSG00000166783.22	ENST00000552535.1	562	3	143	0	143	0	multi-exon	FALSE	canonical	3	26	junction_1	4	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGCTGAAAAGCCAGCCA	NA	False	NA	NA	False	NA	NA	NA	15617222	15612705	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_15612778_15615829_15616006_15617051
H1_mix_00034133	chr16	-	735	5	FSM	ENSG00000133393.13	ENST00000573396.5	735	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	230.388123608835	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTGCAGTGGCACGATC	1	True	NA	89	True	NA	NA	NA	15888599	15867178	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_15867517_15879803_15879889_15882948_15883021_15884007_15884206_15888557
H1_mix_00034135	chr16	-	7040	3	ISM	ENSG00000091262.17	ENST00000205557.12	5140	31	68724	-6025	1006	6025	3prime_fragment	FALSE	canonical	3	16	junction_1	0.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGGGCAGGGGGA	5857	False	NA	NA	False	NA	NA	NA	16154770	16143539	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_16150242_16150577_16150773_16154627
H1_mix_00034136	chr16	-	1401	1	FSM	ENSG00000206706.1	ENST00000383979.1	100	1	-537	-764	-537	764	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTAGGTGGGTCTGCGG	NA	False	NA	NA	False	NA	NA	NA	16314748	16313347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_16313300_16314700
H1_mix_00034138	chr16	-	1370	1	FSM	ENSG00000279410.1	ENST00000624763.1	1370	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCCTGGGTGACAGACTG	NA	False	NA	NA	False	NA	NA	NA	17194232	17192862	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_17192900_17194200
H1_mix_00034139	chr16	-	4082	22	FSM	ENSG00000285628.1	ENST00000648391.1	4082	22	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_13	86.6890865820278	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTCCACCCTCAGCGGA	NA	False	NA	NA	False	NA	NA	NA	18344283	18318007	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18318436_18319794_18319831_18319939_18320001_18321016_18321125_18324090_18324236_18324398_18324499_18328113_18328243_18334850_18334968_18336633_18336761_18336850_18337062_18337155_18337300_18337385_18337557_18339047_18339244_18339385_18339621_18339800_18339958_18340248_18340870_18341621_18341767_18342656_18342810_18343199_18343360_18343425_18343640_18343732_18344013_18344139
H1_mix_00034140	chr16	-	6626	31	NNC	ENSG00000285628.1	novel	4082	22	NA	NA	-8193	-5967	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_26	78.0806136132537	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGAGTTTGTCCTTTCT	NA	False	NA	NA	False	NA	NA	NA	18352476	18323974	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_18324236_18324398_18324499_18328113_18328243_18334850_18334968_18336633_18336761_18336850_18337062_18337155_18337300_18337385_18337557_18339047_18339244_18339367_18339621_18339800_18339958_18340248_18340870_18341621_18341767_18342656_18342810_18343199_18343360_18343425_18343640_18343732_18344013_18344139_18344284_18345377_18345512_18345863_18346040_18346229_18346362_18347259_18348016_18348488_18348737_18349091_18349219_18349628_18349745_18349932_18350117_18350587_18350772_18350889_18351562_18351773_18351944_18352211_18352284_18352404
H1_mix_00034141	chr16	-	2993	18	NNC	ENSG00000233024.7	novel	1495	10	NA	NA	-1646	0	intron_retention	FALSE	canonical	3	77	junction_17	96.2212344108986	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAGAATAAATAAATAATA	NA	False	NA	NA	False	AAGAAA	-5	NA	18380977	18358120	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_18358589_18359947_18359984_18360092_18360154_18361169_18361278_18364226_18364372_18364534_18364635_18368257_18368387_18372577_18372664_18374831_18375070_18376735_18376863_18376952_18377164_18377257_18377402_18377487_18377659_18379154_18379351_18379474_18379728_18379907_18380065_18380516_18380711_18380808
H1_mix_00034142	chr16	-	3359	16	NNC	ENSG00000233024.7	novel	1495	10	NA	NA	-1646	0	intron_retention	FALSE	canonical	3	77	junction_15	82.5768329093174	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAGAATAAATAAATAATA	NA	False	NA	NA	False	AAGAAA	-5	NA	18380977	18358120	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_18358589_18359947_18359984_18360092_18360154_18361169_18361278_18364226_18364372_18364534_18364635_18368257_18368387_18374831_18375070_18376735_18376863_18376952_18377164_18377257_18377402_18377487_18377659_18379154_18379351_18379474_18379728_18379907_18380711_18380808
H1_mix_00034145	chr16	-	690	3	ISM	ENSG00000254681.6	ENST00000532415.5	10291	32	18707	7864	1271	322	internal_fragment	FALSE	canonical	3	25	junction_2	95	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGGGGACCAAGACCTG	NA	False	NA	NA	False	NA	NA	NA	18383233	18382384	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_18382586_18382651_18382866_18382958
H1_mix_00034147	chr16	-	1174	3	ISM	ENSG00000254681.6	ENST00000532415.5	10291	32	6536	19380	-4485	1071	internal_fragment	FALSE	canonical	3	60	junction_1	54.5	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGGACACGAGCTGGGGG	6635	False	NA	NA	False	NA	NA	NA	18395404	18393900	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_18394253_18394370_18395043_18395254
H1_mix_00034151	chr16	-	2190	4	FSM	ENSG00000134419.15	ENST00000576436.5	2190	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	6561.6819659461	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGCTTCCACTTGGTC	9640	False	NA	-35	True	AATAAA	-14	NA	18789137	18782967	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18784824_18786239_18786337_18788062_18788143_18788980
H1_mix_00034156	chr16	-	1145	4	FSM	ENSG00000103550.14	ENST00000565844.1	1394	4	0	249	0	-249	multi-exon	FALSE	canonical	3	724	junction_2	11.4697670227235	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTTGGGGCTAGGGCT	572	False	NA	NA	False	NA	NA	NA	19718235	19710508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_19710587_19711371_19711441_19714117_19715038_19718157
H1_mix_00034157	chr16	-	1509	2	FSM	ENSG00000066654.14	ENST00000570231.1	1040	2	-469	0	-469	0	multi-exon	FALSE	canonical	3	402	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATTGTGACTAAAAACAG	3072	False	NA	NA	False	GGGGCT	-28	NA	20738741	20736811	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_20737287_20737707
H1_mix_00034159	chr16	-	2650	9	FSM	ENSG00000196678.14	ENST00000569729.5	2646	9	0	-4	0	0	multi-exon	FALSE	canonical	3	21	junction_1	30.0663329157382	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTATGCATTTGTATGT	-14	True	NA	-2	True	AATAAA	-21	NA	20806476	20796339	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_20798212_20799262_20799352_20799956_20800039_20800301_20800403_20801202_20801360_20802795_20802924_20803432_20803517_20803602_20803671_20806407
H1_mix_00034160	chr16	-	3657	10	FSM	ENSG00000196678.14	ENST00000564349.5	3657	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	33.980749815516	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTATGCATTTGTATGT	9	True	NA	-2	True	AATAAA	-21	NA	20900349	20796339	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_20799068_20799262_20799352_20799956_20800039_20800301_20800403_20801202_20801360_20802795_20802924_20803432_20803517_20803602_20803671_20896307_20896382_20900203
H1_mix_00034161	chr16	-	2903	10	FSM	ENSG00000196678.14	ENST00000563117.5	2903	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_9	26.8718954566309	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTTTTATAAGTTCTT	NA	False	NA	NA	False	NA	NA	NA	20806676	20797373	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_20799068_20799262_20799352_20799956_20800039_20800301_20800403_20801202_20801360_20802795_20802924_20803432_20803517_20803602_20803671_20805714_20805946_20806407
H1_mix_00034162	chr16	-	1787	9	NIC	ENSG00000196678.14	novel	2903	10	NA	NA	16	-471	intron_retention	FALSE	canonical	2	6	junction_7	35.275478380881	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATCTCATTCCACAGGGG	110	False	NA	NA	False	NA	NA	NA	20806430	20797844	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_20798212_20799262_20799352_20799956_20800039_20800301_20800403_20801202_20801360_20802795_20802924_20803432_20803512_20803602_20803671_20805714
H1_mix_00034171	chr16	-	2061	12	NIC	ENSG00000180747.15	novel	2774	12	NA	NA	-44	-1518	combination_of_known_junctions	FALSE	canonical	3	36	junction_11	77.3321696502168	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAGGTAAGTAATACAC	NA	False	NA	NA	False	CATAAA	-3	NA	21520488	21464722	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_21464818_21467091_21467317_21469746_21469920_21471653_21471752_21472672_21472746_21473123_21473250_21476598_21476813_21478090_21478147_21479441_21479579_21484371_21484536_21487577_21487617_21519827
H1_mix_00034172	chr16	-	342	1	FSM	ENSG00000258186.2	ENST00000553010.2	536	1	193	1	193	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTGAGTACGGGGCGCGG	23	True	NA	NA	False	NA	NA	NA	21520172	21519830	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_21519800_21520200
H1_mix_00034174	chr16	-	3645	7	FSM	ENSG00000248124.9	ENST00000514813.6	3645	7	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_1	10.7548438699345	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTTGTGATGCCAAAGAT	NA	False	NA	NA	False	AATAAA	-13	NA	21808816	21796105	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_21796451_21797016_21797113_21797749_21797859_21799649_21799835_21800706_21800838_21802635_21802729_21806130
H1_mix_00034175	chr16	-	2602	6	FSM	ENSG00000248124.9	ENST00000546471.5	2608	6	0	6	0	-4	multi-exon	FALSE	canonical	3	15	junction_3	8.33306666239986	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCTTGGTGCATGTGGT	NA	False	NA	NA	False	AATAAA	-10	NA	21807737	21796635	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_21797113_21797749_21797859_21799649_21799835_21800706_21800838_21802635_21802729_21806130
H1_mix_00034176	chr16	-	1607	6	FSM	ENSG00000248124.9	ENST00000688619.1	2527	6	917	3	868	-3	multi-exon	FALSE	canonical	3	35	junction_1	19.239542614106	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTTTTCAGGTTTGTGG	891	False	NA	NA	False	AATAAA	-17	NA	21819516	21810429	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_21810839_21811777_21811838_21812285_21812416_21812521_21812612_21817461_21817519_21818655
H1_mix_00034177	chr16	-	1066	8	NIC	ENSG00000248124.9	novel	1178	8	NA	NA	-1	-264	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	22.1221100960564	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGCTTGAGTCTTACAT	11	False	NA	NA	False	AGTAAA	-22	NA	21820396	21810690	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_21810839_21811777_21811838_21812285_21812416_21812521_21812612_21817461_21817519_21818655_21818762_21819108_21819482_21820294
H1_mix_00034179	chr16	-	2323	1	NIC	ENSG00000185864.18	novel	432	5	NA	NA	565	-2036	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTGAATCACAGCCTTC	NA	False	NA	NA	False	NA	NA	NA	21842847	21840524	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_21840500_21842800
H1_mix_00034181	chr16	-	560	5	FSM	ENSG00000185864.18	ENST00000520808.6	560	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	123.370124017122	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACGGATGTACAGCAGAGAG	NA	False	NA	NA	False	NA	NA	NA	21857660	21843743	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_21843794_21847412_21847542_21851914_21852047_21857258_21857417_21857569
H1_mix_00034188	chr16	-	201	2	ISM	ENSG00000185710.9	ENST00000523028.5	4131	28	24002	12330	-2735	-6714	internal_fragment	FALSE	canonical	3	58	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGCCACAAAGAAACATTTC	NA	False	NA	NA	False	NA	NA	NA	21892022	21891667	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_21891748_21891901
H1_mix_00034189	chr16	-	592	3	ISM	ENSG00000185710.9	ENST00000523028.5	4131	28	16918	16185	-9819	6029	internal_fragment	FALSE	canonical	3	227	junction_1	58.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCCTTTAATTGTAATG	NA	False	NA	NA	False	NA	NA	NA	21899106	21895522	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_21895793_21896514_21896617_21898886
H1_mix_00034190	chr16	-	867	7	FSM	ENSG00000185710.9	ENST00000381448.8	868	7	1	0	1	0	multi-exon	FALSE	canonical	3	76	junction_6	27.2748357770797	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTAACAGATGTAAGTGCTT	NA	False	NA	NA	False	NA	NA	NA	21911371	21901551	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_21901715_21903448_21903547_21904467_21904541_21904918_21905045_21908391_21908606_21909883_21909940_21911234
H1_mix_00034192	chr16	-	361	2	FSM	ENSG00000140743.8	ENST00000567010.1	361	2	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTTGAACAAAATCACTTAA	NA	False	NA	NA	False	AAGAAA	-28	NA	22349773	22349155	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_22349444_22349700
H1_mix_00034194	chr16	-	279	1	FSM	ENSG00000260973.1	ENST00000567401.1	1666	1	1313	74	1313	-74	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAATGAGTTTTGTGTAT	9213	False	NA	NA	False	NA	NA	NA	22610883	22610604	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_22610600_22610900
H1_mix_00034195	chr16	-	1073	2	FSM	ENSG00000283213.1	ENST00000636266.1	1352	2	121	158	121	-158	multi-exon	FALSE	canonical	3	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGTTCCTCAGCTGTAAA	NA	False	NA	NA	False	NA	NA	NA	22813559	22811901	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_22812402_22812986
H1_mix_00034199	chr16	-	5041	17	NNC	ENSG00000103365.15	novel	5973	17	NA	NA	0	42631	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	137.208554762449	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCCAGGTATAGTAGCAT	NA	False	NA	NA	False	NA	NA	NA	23495778	23420910	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_23420936_23464324_23467701_23468885_23468997_23469995_23470166_23474903_23475062_23478367_23478502_23478882_23478912_23479764_23479888_23480644_23480771_23482922_23483005_23486014_23486153_23486709_23486791_23488605_23488710_23491676_23491801_23493359_23493459_23494302_23494379_23495693
H1_mix_00034200	chr16	-	7085	18	NNC	ENSG00000103365.15	novel	5973	17	NA	NA	0	1329	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	133.244370551769	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTATTTTTCTCTGTATT	-14	True	NA	-4	True	AATAAA	-24	NA	23510487	23462212	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_23462706_23462915_23467701_23468885_23468997_23469995_23470166_23474903_23475062_23478367_23478502_23478882_23478912_23479764_23479888_23480644_23480771_23482922_23483005_23486014_23486153_23486709_23486791_23488605_23488710_23491676_23491801_23493359_23493459_23494302_23494379_23495693_23495779_23510320
H1_mix_00034206	chr16	-	664	6	NNC	ENSG00000004779.10	novel	665	5	NA	NA	0	68323	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1366.28746609196	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCCTTAATGAGGAAACT	34	False	NA	NA	False	AAAAAG	-10	NA	23596277	23512690	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_23512729_23581013_23581174_23582275_23582376_23585335_23585424_23587196_23587320_23596122
H1_mix_00034207	chr16	-	503	4	FSM	ENSG00000004779.10	ENST00000562133.5	503	4	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	1574.63794780472	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCCCCCATCTTCAGT	34	False	NA	-27	True	AATAAA	-14	NA	23596277	23581013	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_23581174_23582275_23582376_23585335_23585424_23596122
H1_mix_00034210	chr16	-	203	2	FSM	ENSG00000134398.15	ENST00000566565.1	313	2	0	110	0	-110	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTTCCACCTTTCTCTG	6368	False	NA	NA	False	NA	NA	NA	23706854	23706329	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_23706432_23706753
H1_mix_00034211	chr16	-	3639	22	NNC	ENSG00000140750.17	novel	3495	20	NA	NA	-66	30605	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	139.769749110599	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACAGGCACGGTGGCTCAC	NA	False	NA	NA	False	NA	NA	NA	25015435	24888783	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_24888813_24919388_24920261_24927683_24927733_24930783_24931405_24935469_24935640_24939363_24939598_24941986_24942144_24943770_24943863_24947481_24947596_24949403_24949485_24952288_24952371_24952930_24953043_24954602_24954731_24959670_24959753_24959910_24959980_24964196_24964309_24968350_24968428_24968660_24968773_24970506_24970581_24977214_24977320_24978965_24979006_25015208
H1_mix_00034212	chr16	-	3219	19	FSM	ENSG00000140750.17	ENST00000303665.9	3219	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	144.809410716634	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTCATAATTCTTGGA	17	True	NA	-10	True	ATTAAA	-21	NA	25015331	24919392	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_24920261_24930783_24931405_24935469_24935640_24941986_24942144_24943770_24943863_24947481_24947596_24949403_24949485_24952288_24952371_24952930_24953043_24954602_24954731_24959670_24959753_24959910_24959980_24964196_24964309_24968350_24968428_24968660_24968773_24970506_24970581_24977214_24977320_24978965_24979006_25015208
H1_mix_00034216	chr16	-	1215	1	FSM	ENSG00000230330.1	ENST00000433603.1	273	1	-110	-832	-110	832	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACGCCTCCATCTTTCTG	NA	False	NA	NA	False	AATAAA	-34	NA	26032921	26031706	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_26031700_26032900
H1_mix_00034218	chr16	-	2037	4	FSM	ENSG00000077235.18	ENST00000562609.2	2824	4	787	0	787	0	multi-exon	FALSE	canonical	3	760	junction_3	16.9377946878833	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGCTCGGCAGACCCCA	NA	False	NA	NA	False	NA	NA	NA	27465540	27461295	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_27461563_27462293_27462487_27463540_27464837_27465259
H1_mix_00034221	chr16	-	4362	18	NNC	ENSG00000169180.12	novel	4537	24	NA	NA	-1070	51634	intron_retention	FALSE	non_canonical	0	0	junction_1	82.3814236459757	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGGACTTCCTCCTCAAT	NA	False	NA	NA	False	NA	NA	NA	28154279	28046341	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_28046367_28097975_28098640_28101457_28101689_28101846_28101946_28104545_28104708_28106042_28106215_28106382_28106498_28107521_28107678_28111816_28112007_28112903_28113051_28117317_28117463_28121669_28121763_28125688_28125849_28132333_28132404_28133840_28133934_28135215_28135325_28146093_28146204_28152658
H1_mix_00034222	chr16	-	4562	25	NNC	ENSG00000169180.12	novel	4537	24	NA	NA	0	51634	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	90.4386589997146	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGGACTTCCTCCTCAAT	-18	True	NA	NA	False	NA	NA	NA	28211965	28046341	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_28046367_28097975_28098640_28101457_28101689_28101846_28101946_28104545_28104708_28106042_28106215_28106382_28106498_28107521_28107678_28111816_28112007_28112903_28113051_28117317_28117463_28121669_28121763_28125688_28125849_28132333_28132404_28133840_28133934_28135215_28135325_28146093_28146204_28152658_28152786_28156073_28156528_28166507_28166586_28169749_28169910_28175897_28176096_28177219_28177333_28180940_28181032_28211365
H1_mix_00034223	chr16	-	3922	23	NIC	ENSG00000169180.12	novel	4537	24	NA	NA	13	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_21	86.1331853575305	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTGGGGAGCTGCTT	596	False	NA	-5	True	AATAAA	-25	NA	28211463	28097975	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_28098640_28101457_28101689_28101846_28101946_28104545_28104708_28106042_28106215_28106382_28106498_28107521_28107678_28111816_28112007_28112903_28113051_28117317_28117463_28121669_28121763_28125688_28125849_28132333_28132404_28133840_28133934_28135215_28135325_28146093_28146204_28152658_28152786_28156073_28156528_28166507_28166586_28169749_28169910_28175897_28176096_28180940_28181032_28211365
H1_mix_00034227	chr16	-	2972	23	NNC	ENSG00000205609.13	novel	2913	21	NA	NA	0	158934	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1164.7165449865	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTGCTGTTTCCAGGAG	-8	True	NA	NA	False	NA	NA	NA	28403841	28220644	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_28220676_28308450_28308478_28379713_28379881_28379975_28380139_28380291_28380380_28380467_28380534_28380631_28380792_28383117_28383482_28388057_28388283_28388507_28388699_28390290_28390385_28390519_28390646_28390839_28390982_28391751_28391856_28391979_28392143_28399870_28399999_28400376_28400487_28400614_28400670_28400858_28400985_28401206_28401397_28401538_28401605_28403517_28403649_28403786
H1_mix_00034228	chr16	-	2435	2	FSM	ENSG00000246465.1	ENST00000501520.1	2481	2	0	46	0	-46	multi-exon	FALSE	canonical	2	3	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGACACTGTTTCTATTA	-9	True	NA	NA	False	CATAAA	-11	NA	28292064	28284930	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_28287068_28291766
H1_mix_00034229	chr16	-	1329	7	FSM	ENSG00000198156.10	ENST00000533640.5	1329	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.98607881119482	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAACTAACGAAGAATAAAT	NA	False	NA	NA	False	AAAAAG	-41	NA	28356654	28342554	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_28343189_28344547_28344584_28344692_28344754_28348833_28349030_28349141_28349242_28352878_28353062_28356535
H1_mix_00034230	chr16	-	3448	22	NNC	ENSG00000205609.13	novel	2913	21	NA	NA	0	3580	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	927.027074728086	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTCTACTAAAAATACAAAAA	-8	True	NA	NA	False	NA	NA	NA	28403841	28375998	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_28376536_28379716_28379881_28379975_28380139_28380291_28380380_28380467_28380534_28380631_28380792_28383117_28383482_28388057_28388283_28388507_28388699_28390290_28390385_28390519_28390646_28390839_28390982_28391751_28391856_28391979_28392143_28399870_28399999_28400376_28400487_28400614_28400670_28400858_28400985_28401206_28401397_28401538_28401605_28403517_28403649_28403786
H1_mix_00034231	chr16	-	1602	13	NIC	ENSG00000188603.22	novel	1608	14	NA	NA	2	1	intron_retention	FALSE	canonical	2	10	junction_11	65.9928447299823	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGACTTCTTATATCGTTT	3589	False	NA	-11	True	AATAAA	-15	NA	28491981	28477283	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28491481_28491561_28491713
H1_mix_00034232	chr16	-	1957	14	FSM	ENSG00000188603.22	ENST00000561689.6	1957	14	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_9	35.0966543694551	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCATGGACTTCTTATAT	18	True	NA	-16	True	AATAAA	-10	NA	28492044	28477288	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_28477636_28477736_28477878_28482104_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491481_28491561_28491713
H1_mix_00034233	chr16	-	1582	13	FSM	ENSG00000188603.22	ENST00000637578.1	1577	13	0	-5	0	0	multi-exon	FALSE	canonical	3	10	junction_10	78.8565416859417	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCCATTGTCTCCCACT	-3	True	NA	-83	True	NA	NA	NA	28492023	28477355	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28488590_28488663_28489289_28489387_28491713
H1_mix_00034235	chr16	-	969	6	FSM	ENSG00000188603.22	ENST00000568443.2	969	6	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_2	19.4792196968975	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCAGGTGGAGCAGGGA	20	True	NA	NA	False	NA	NA	NA	28492042	28486577	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491481
H1_mix_00034238	chr16	-	2266	12	ISM	ENSG00000177548.13	ENST00000358201.9	2307	13	528	0	0	0	3prime_fragment	TRUE	canonical	3	75	junction_4	10.6948663053474	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGTCGCCTTGTCCCTGC	-9	True	NA	-3	True	AATAAA	-17	NA	28924710	28904420	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_28905045_28905396_28905514_28905703_28905760_28905866_28905879_28906018_28906197_28908608_28908765_28910887_28910987_28911083_28911180_28914235_28914587_28914671_28914783_28919785_28919944_28924402
H1_mix_00034241	chr16	-	553	4	FSM	ENSG00000177548.13	ENST00000564473.5	553	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	44.1437047229462	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTGCATCCGGAGTGTTC	30	True	NA	NA	False	NA	NA	NA	28925177	28917822	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_28917930_28919785_28919944_28924402_28924616_28925102
H1_mix_00034243	chr16	-	710	6	ISM	ENSG00000254206.5	ENST00000524087.5	3653	8	9800	2901	3467	779	3prime_fragment	FALSE	canonical	3	33	junction_3	178.874928371754	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATTGCCCTACTGGCCCT	NA	False	NA	NA	False	NA	NA	NA	29394229	29384254	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_29384290_29385649_29385686_29385794_29385856_29389940_29390137_29390248_29390349_29393947
H1_mix_00034246	chr16	-	2591	13	Fusion	ENSG00000260727.2_ENSG00000205534.6	novel	4221	29	NA	NA	-86	-17443	multi-exon	FALSE	canonical	3	34	junction_12	184.962815332043	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTCTTCTTTTTCCTTGA	-1	True	NA	NA	False	AATAAA	-35	NA	29613726	29545010	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr16_-_29545451_29546165_29546268_29548537_29548763_29551188_29551362_29553085_29553184_29554415_29554489_29554866_29554993_29558664_29558879_29560156_29560216_29561514_29561652_29565350_29565507_29566085_29566250_29613102
H1_mix_00034247	chr16	-	5614	1	Genic_Genomic	ENSG00000185905.4	novel	NA	NA	NA	NA	2753	4839	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATGTCCAGCTATTTTA	2836	False	NA	NA	False	NA	NA	NA	29743237	29737623	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr16_-_29737600_29743200
H1_mix_00034248	chr16	-	2022	6	FSM	ENSG00000103502.14	ENST00000564296.5	1015	6	-207	-800	-69	7	multi-exon	FALSE	canonical	3	30	junction_5	180.653701871841	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGAGTGTGGTCCTTAG	9003	False	NA	-6	True	AATAAA	-25	NA	29863483	29858349	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_29859335_29859441_29859524_29860580_29860663_29861105_29861260_29862585_29862636_29862814
H1_mix_00034249	chr16	-	1129	4	FSM	ENSG00000103502.14	ENST00000562041.1	1129	4	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_3	12.1928941054479	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGAGGGACCTTTAGGT	9072	False	NA	NA	False	NA	NA	NA	29863414	29859459	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_29859524_29860580_29860663_29861105_29861260_29862585
H1_mix_00034250	chr16	-	3291	16	NIC	ENSG00000174938.15	novel	3801	17	NA	NA	26	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_8	97.1570549848714	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGCCGGTGGAGTGTGGG	7577	False	NA	-11	True	AATAAA	-21	NA	29899238	29871158	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_29871729_29872186_29872284_29872408_29872527_29873239_29873432_29873537_29873730_29876755_29876951_29877270_29877468_29878286_29878426_29885585_29885750_29887648_29887818_29888539_29888726_29895258_29895461_29895720_29895861_29896821_29897122_29897852_29897985_29898940
H1_mix_00034251	chr16	-	3425	17	FSM	ENSG00000174938.15	ENST00000537485.5	3423	17	0	-2	0	0	multi-exon	FALSE	canonical	2	8	junction_16	93.3460463811939	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGCCGGTGGAGTGTGGG	3	True	NA	-11	True	AATAAA	-21	NA	29899264	29871158	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_29871729_29872186_29872284_29872408_29872527_29872704_29872744_29873239_29873432_29873537_29873730_29876755_29876951_29877270_29877468_29878286_29878426_29879863_29880065_29885585_29885750_29887648_29887818_29888539_29888726_29895258_29895461_29895720_29895861_29896821_29897122_29898940
H1_mix_00034252	chr16	-	3611	17	NIC	ENSG00000174938.15	novel	3843	18	NA	NA	15	-20	combination_of_known_splicesites	FALSE	canonical	3	11	junction_4	91.3132486280058	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGAAAATCGCCACTTGT	25	True	NA	-33	True	NA	NA	NA	29899532	29871180	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_29871729_29872186_29872284_29872408_29872527_29872704_29872744_29873537_29873730_29876755_29876951_29877270_29877468_29878286_29878426_29879863_29880065_29885585_29885750_29887648_29887818_29888539_29888726_29895258_29895461_29895720_29895861_29896821_29897122_29897852_29897985_29898940
H1_mix_00034254	chr16	-	1138	6	NIC	ENSG00000174943.11	novel	1716	6	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	39.514048134809	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGCTGGCTCCTGGGGA	4	True	NA	-4	True	AATAAA	-15	NA	29926190	29906338	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_29906567_29910977_29911174_29911814_29911868_29911959_29912050_29923189_29923360_29925789
H1_mix_00034256	chr16	-	1662	6	FSM	ENSG00000149929.16	ENST00000564026.1	988	6	35	-709	0	49	multi-exon	FALSE	canonical	3	62	junction_3	47.9249413145181	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGGGTGAGTCCTGAGAT	16	True	NA	40	True	NA	NA	NA	29995608	29992280	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_29993371_29993458_29993558_29993639_29993809_29995102_29995218_29995342_29995464_29995540
H1_mix_00034257	chr16	-	582	3	FSM	ENSG00000149929.16	ENST00000565996.1	582	3	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_2	9	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCCAGACTACTTTGGAC	16	True	NA	NA	False	NA	NA	NA	29995608	29994824	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_29995218_29995342_29995464_29995540
H1_mix_00034261	chr16	-	992	3	FSM	ENSG00000149927.18	ENST00000567824.1	1050	3	58	0	58	0	multi-exon	FALSE	canonical	1	1	junction_1	1.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAGGCTCCTAGGAAGAG	9687	False	NA	NA	False	NA	NA	NA	30021630	30012263	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30012678_30013466_30013597_30021182
H1_mix_00034262	chr16	-	1689	3	FSM	ENSG00000149926.14	ENST00000564806.1	1710	3	21	0	21	0	multi-exon	FALSE	canonical	3	71	junction_1	1.5	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGACGATCTGCGTGAA	7035	False	NA	-30	True	NA	NA	NA	30029515	30024451	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30025822_30026608_30026844_30029431
H1_mix_00034263	chr16	-	1823	9	FSM	ENSG00000149922.12	ENST00000395224.7	1843	9	20	0	-17	0	multi-exon	FALSE	canonical	2	2	junction_8	5.93717104351896	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGGGCTCCTGTGTTTGG	4357	False	NA	0	True	AATAAA	-28	NA	30091904	30085792	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30086439_30086511_30086696_30086777_30086852_30088544_30088616_30088692_30088840_30088942_30089211_30090757_30090993_30091075_30091242_30091872
H1_mix_00034264	chr16	-	938	6	NIC	ENSG00000090238.12	novel	935	5	NA	NA	47	-2	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	146.709781541655	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTCAGGCTCGCGTGTAA	138	False	NA	-37	True	AATAAA	-16	NA	30096123	30092315	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_30092800_30094384_30094476_30094788_30094898_30095102_30095147_30095251_30095435_30096096
H1_mix_00034270	chr16	-	6409	4	NNC	ENSG00000198064.14	novel	3584	8	NA	NA	4615	0	intron_retention	TRUE	non_canonical	0	0	junction_1	316.955307049222	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACTAACAAAGAATAAA	NA	False	NA	NA	False	AATAAA	-33	NA	30230901	30222936	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_30223150_30223236_30225804_30227163_30227200_30227308
H1_mix_00034271	chr16	-	3584	8	FSM	ENSG00000198064.14	ENST00000520915.5	3584	8	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_7	231.37009843318	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACTAACAAAGAATAAA	NA	False	NA	NA	False	AATAAA	-33	NA	30245801	30222936	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30225804_30227163_30227200_30227308_30227370_30231439_30231636_30231747_30231848_30235450_30235580_30245453_30245612_30245764
H1_mix_00034273	chr16	-	2484	2	FSM	ENSG00000169221.14	ENST00000475650.1	2484	2	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTTCTGCCTTGTTA	NA	False	NA	-2	True	NA	NA	NA	30359674	30357101	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30358574_30358662
H1_mix_00034274	chr16	-	1031	6	FSM	ENSG00000169221.14	ENST00000490703.1	1031	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	58.6808316232822	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGAGAGAAGCAGGAGAAGGA	5250	False	NA	NA	False	NA	NA	NA	30365212	30358093	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30358574_30358662_30358818_30359537_30359604_30359726_30359842_30364899_30365007_30365104
H1_mix_00034277	chr16	-	713	4	NNC	ENSG00000180096.13	novel	1437	11	NA	NA	2729	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	16.8588914885357	61	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGAGCCTTCTCCTTCCTT	3187	False	NA	-6	True	AATAAA	-21	NA	30379641	30378134	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_30378521_30378609_30378701_30379017_30379184_30379571
H1_mix_00034281	chr16	-	2849	4	NIC	ENSG00000197162.10	novel	2867	4	NA	NA	-22	-13	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	4.92160768674447	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTGAAAGCAAGAGCATT	-6	True	NA	-17	True	AATAAA	-3	NA	30585719	30578373	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_30579848_30582510_30583444_30585121_30585251_30585406
H1_mix_00034282	chr16	-	1207	3	FSM	ENSG00000156853.13	ENST00000563304.5	1207	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	37	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTACCCCTCACTGCT	-17	True	NA	NA	False	NA	NA	NA	30610386	30604539	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30605448_30609524_30609639_30610201
H1_mix_00034283	chr16	-	363	2	NNC	ENSG00000261840.4	novel	1142	2	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTGGTGCCTTGATTAT	18	True	NA	-3	True	AATAAA	-23	NA	30698994	30697706	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_30697932_30698856
H1_mix_00034285	chr16	-	496	2	FSM	ENSG00000196118.12	ENST00000537986.1	496	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATCCCTGCACCCTGCTG	1663	False	NA	-17	True	AATAAA	-19	NA	30760559	30757434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30757655_30760283
H1_mix_00034286	chr16	-	750	7	NNC	ENSG00000099385.12	novel	857	6	NA	NA	0	4258	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	315.301266868512	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTTTGGCTGGATATGG	3127	False	NA	NA	False	NA	NA	NA	30893942	30883536	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_30883568_30887797_30887991_30888859_30888946_30892585_30892748_30892839_30892949_30893211_30893291_30893852
H1_mix_00034287	chr16	-	4068	1	FSM	ENSG00000279196.1	ENST00000624286.1	3641	1	-591	164	-591	-164	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCCTGAAGGCCCCTTT	8681	False	NA	NA	False	NA	NA	NA	30988861	30984793	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_30984800_30988900
H1_mix_00034289	chr16	-	2318	4	FSM	ENSG00000167394.13	ENST00000539836.3	2469	4	152	-1	66	0	multi-exon	FALSE	canonical	0	0	junction_2	41.9550023504018	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGTCATCTTCTGTGTTC	9321	False	NA	-8	True	ATTAAA	-16	NA	31064903	31060849	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_31062281_31063812_31064482_31064571_31064686_31064799
H1_mix_00034290	chr16	-	780	4	NNC	ENSG00000103490.14	novel	757	3	NA	NA	0	47403	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	187.908370105101	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCATGAAACTATTTGCTG	-5	True	NA	NA	False	AAAAAG	-45	NA	31202756	31154082	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_31154110_31201485_31201842_31202146_31202204_31202416
H1_mix_00034292	chr16	-	1910	1	Genic_Genomic	ENSG00000261474.1	novel	NA	NA	NA	NA	2840	791	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTAATTAACTGTCTTTT	8694	False	NA	NA	False	NA	NA	NA	31450653	31448743	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr16_-_31448700_31450700
H1_mix_00034293	chr16	-	461	1	FSM	ENSG00000280132.1	ENST00000622954.1	1905	1	1131	313	1131	-313	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCTACTTGGGAGGCTGA	6807	False	NA	NA	False	AAAACA	-43	NA	31470977	31470516	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_31470500_31471000
H1_mix_00034294	chr16	-	2765	13	FSM	ENSG00000140688.17	ENST00000570164.5	2783	13	0	18	0	5	multi-exon	FALSE	canonical	0	0	junction_6	44.4449565942714	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGCTCGGCAATTGCAA	-2	True	NA	-24	True	AATAAA	-17	NA	31508391	31489488	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_31490933_31492008_31492087_31492196_31492341_31492977_31493049_31493466_31493525_31493602_31493782_31493865_31493937_31496848_31496951_31499301_31499408_31499492_31499526_31500685_31500732_31507763_31507879_31508073
H1_mix_00034298	chr16	-	303	3	ISM	ENSG00000260781.1	ENST00000562773.1	1937	15	8830	18670	8830	10341	internal_fragment	FALSE	canonical	3	9	junction_2	15	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAGGAAGGTGGCCACTG	NA	False	NA	NA	False	NA	NA	NA	33928194	33926088	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_33926218_33926481_33926544_33928082
H1_mix_00034299	chr16	-	603	3	FSM	ENSG00000171241.9	ENST00000565887.1	603	3	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	2.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAGAAATTCAGGTAAA	5367	False	NA	NA	False	NA	NA	NA	46615983	46603989	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_46604462_46608296_46608390_46615945
H1_mix_00034300	chr16	-	899	1	FSM	ENSG00000280376.1	ENST00000623850.1	485	1	-136	-278	-136	278	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCCCGTCTCTAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	46674063	46673164	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_46673200_46674100
H1_mix_00034303	chr16	-	417	1	FSM	ENSG00000240793.1	ENST00000498379.1	384	1	-59	26	-59	-26	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCGTCCCAAAAAGAAGGTC	NA	False	NA	NA	False	NA	NA	NA	48334913	48334496	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_48334500_48334900
H1_mix_00034305	chr16	-	296	3	FSM	ENSG00000102921.8	ENST00000565638.1	296	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	69.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAGGAGTTTCTTCAGAA	NA	False	NA	NA	False	NA	NA	NA	48553653	48546181	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_48546255_48548006_48548115_48553538
H1_mix_00034307	chr16	-	989	1	FSM	ENSG00000275155.1	ENST00000615979.1	615	1	-409	35	-409	-35	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATCCTAATTAAATAAAAC	9748	False	NA	-35	True	NA	NA	NA	49848041	49847052	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_49847100_49848000
H1_mix_00034310	chr16	-	407	2	FSM	ENSG00000103449.13	ENST00000562674.1	407	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTCAGGACAATCTGTTA	957	False	NA	NA	False	AATAAA	-18	NA	51151367	51143203	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_51143409_51151165
H1_mix_00034311	chr16	-	4934	1	FSM	ENSG00000279344.1	ENST00000624289.1	2594	1	781	-3121	781	3121	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATATTGAAATATTAGAAAG	NA	False	NA	NA	False	NA	NA	NA	53480769	53475835	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_53475800_53480800
H1_mix_00034313	chr16	-	2321	1	FSM	ENSG00000166971.17	ENST00000571523.2	2321	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTATAAATGCTTTATTG	9250	False	NA	NA	False	AATATA	-15	NA	53493968	53491647	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_53491600_53494000
H1_mix_00034314	chr16	-	1782	10	NIC	ENSG00000166971.17	novel	2133	11	NA	NA	-1	-12	combination_of_known_junctions	FALSE	canonical	3	75	junction_1	16.0769753312764	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACAAAGGCTAATTTATA	-6	True	NA	NA	False	AATATA	-3	NA	53503224	53491659	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_53492523_53492692_53492754_53494137_53494246_53494338_53494438_53494516_53494606_53495072_53495174_53495261_53495327_53498390_53498597_53500217_53500330_53503146
H1_mix_00034317	chr16	-	1540	2	FSM	ENSG00000177508.12	ENST00000558180.2	1540	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGACGAAAGTCACTTTTT	-6	True	NA	NA	False	NA	NA	NA	54286724	54284119	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_54285614_54286678
H1_mix_00034319	chr16	-	2620	16	FSM	ENSG00000125124.14	ENST00000683020.1	2611	16	0	-9	0	1	multi-exon	FALSE	canonical	0	0	junction_14	45.2695629903066	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTGCCCATTTGTATTTT	16	False	56520091	37	True	TATAAA	-16	NA	56520075	56484347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498569_56499777_56499908_56501352_56501498_56502316_56502457_56502672_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519745
H1_mix_00034320	chr16	-	2925	17	FSM	ENSG00000125124.14	ENST00000682493.1	2928	17	12	-9	0	1	multi-exon	FALSE	canonical	0	0	junction_15	44.0310614793693	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTGCCCATTTGTATTTT	8	True	NA	37	True	TATAAA	-16	NA	56520083	56484347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498694_56499777_56499908_56500853_56501026_56501352_56501498_56502316_56502457_56502672_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519745
H1_mix_00034321	chr16	-	4009	16	FSM	ENSG00000125124.14	ENST00000684531.1	4012	16	12	-9	0	1	multi-exon	FALSE	canonical	0	0	junction_14	35.806641221365	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTGCCCATTTGTATTTT	8	True	NA	37	True	TATAAA	-16	NA	56520083	56484347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56499908_56500853_56501026_56501352_56501498_56502316_56502457_56502672_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519745
H1_mix_00034322	chr16	-	1447	1	FSM	ENSG00000279019.1	ENST00000623921.1	3691	1	2173	71	2173	-71	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTGCAAGGTGAAGCCTG	NA	False	NA	NA	False	NA	NA	NA	57142413	57140966	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_57141000_57142400
H1_mix_00034323	chr16	-	2723	7	NNC	ENSG00000172775.17	novel	2823	7	NA	NA	-406	0	intron_retention	FALSE	non_canonical	1	44	junction_6	313.882541725404	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTTTTCCTCTACTGA	8262	False	NA	-15	True	AATAAA	-18	NA	57174287	57152465	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_57154508_57164000_57164066_57167092_57167226_57172249_57172373_57172775_57172875_57173727_57173870_57174168
H1_mix_00034324	chr16	-	2638	7	NNC	ENSG00000172775.17	novel	2823	7	NA	NA	0	0	intron_retention	FALSE	non_canonical	1	163	junction_6	281.227468233259	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTTTTCCTCTACTGA	-4	True	NA	-15	True	AATAAA	-18	NA	57186064	57152465	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_57154508_57164000_57164066_57167092_57167226_57172249_57172373_57172775_57172875_57173727_57173870_57186030
H1_mix_00034331	chr16	-	1193	1	FSM	ENSG00000276663.1	ENST00000616553.1	565	1	-539	-89	-539	89	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGAGGCGGGGGCCAGGG	NA	False	NA	NA	False	NA	NA	NA	57246935	57245742	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_57245700_57246900
H1_mix_00034332	chr16	-	1684	10	NNC	ENSG00000005194.15	novel	2021	9	NA	NA	0	87867	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	353.176380234516	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAGAAGA	8	True	NA	NA	False	NA	NA	NA	57447385	57340319	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_57340348_57428551_57429281_57430257_57430340_57431150_57431267_57432486_57432561_57434043_57434213_57436655_57436733_57439181_57439335_57440771_57440984_57447341
H1_mix_00034333	chr16	-	2033	10	NNC	ENSG00000005194.15	novel	2021	9	NA	NA	0	9866	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	353.176380234516	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGGGTGGGGTGGGGGAG	25	False	NA	NA	False	NA	NA	NA	57447368	57418320	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_57418353_57428189_57429281_57430257_57430340_57431150_57431267_57432486_57432561_57434043_57434213_57436655_57436733_57439181_57439335_57440771_57440984_57447341
H1_mix_00034338	chr16	-	1165	4	FSM	ENSG00000005194.15	ENST00000566284.1	1165	4	0	0	0	0	multi-exon	FALSE	canonical	3	1058	junction_3	114.204494949484	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACTTAATGTACTATTAT	5990	False	NA	NA	False	NA	NA	NA	57441403	57433909	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_57434213_57436655_57436733_57439181_57439335_57440771
H1_mix_00034339	chr16	-	2851	7	FSM	ENSG00000125170.11	ENST00000566936.5	2851	7	0	0	0	0	multi-exon	TRUE	canonical	3	207	junction_3	10.6562449087639	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGATCTCTGGTTTTCTCC	6678	False	NA	-5	True	AATAAA	-19	NA	57479805	57471921	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_57473737_57473900_57474040_57474792_57474983_57475099_57475220_57475505_57475621_57475849_57475958_57479441
H1_mix_00034340	chr16	-	2695	8	FSM	ENSG00000125170.11	ENST00000569548.5	1848	8	69	-916	0	0	multi-exon	FALSE	canonical	3	191	junction_1	13.1086511393765	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTTCTGTTAATCAATAA	6678	False	NA	-4	True	AATAAA	-15	NA	57479805	57471960	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_57473496_57473612_57473737_57473900_57474040_57474792_57474983_57475099_57475220_57475505_57475621_57475849_57475958_57479441
H1_mix_00034347	chr16	-	1605	5	FSM	ENSG00000070761.8	ENST00000562622.5	1605	5	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_1	20.6639783197718	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGTTTGTAAATTTGTT	2	True	NA	-17	True	AATAAA	-10	NA	58129371	58113605	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_58114031_58114809_58115458_58116040_58116153_58116871_58116952_58129031
H1_mix_00034349	chr16	-	6816	12	NNC	ENSG00000070770.10	novel	1887	12	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	54.0854848311586	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATTATTGAATAAAAG	32	False	58198191	NA	False	TTTAAA	-3	NA	58198159	58157939	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_58158354_58159144_58164148_58165559_58165709_58166583_58166685_58167206_58167309_58167684_58167796_58168609_58168694_58174450_58174511_58184259_58184311_58186754_58186857_58196732_58196845_58197632
H1_mix_00034353	chr16	-	4999	31	FSM	ENSG00000125107.19	ENST00000441024.6	4999	31	0	0	0	0	multi-exon	FALSE	canonical	3	500	junction_12	76.9448287194576	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATATCTGACAATCTCA	-6	True	NA	NA	False	AATAAA	-20	NA	58629838	58543326	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_58543904_58545360_58545492_58546320_58546499_58546671_58546750_58547185_58547297_58547565_58547683_58549718_58549899_58551131_58551273_58551588_58551820_58553781_58553861_58555250_58555538_58555783_58555909_58556846_58556994_58558472_58558675_58560211_58560363_58574608_58574761_58575006_58575130_58576462_58576583_58578698_58578940_58580632_58580761_58581344_58581516_58582792_58582904_58583055_58583183_58585337_58585507_58586544_58586749_58587200_58587256_58587344_58587414_58587779_58587879_58588798_58588907_58599235_58599512_58629727
H1_mix_00034357	chr16	-	2443	11	NNC	ENSG00000125166.13	novel	2421	10	NA	NA	0	75192	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	370.288333599642	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGTTTTTAGGACATAT	14	True	NA	NA	False	NA	NA	NA	58734302	58631938	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_58631975_58707130_58708294_58709416_58709568_58716013_58716180_58716662_58716814_58718195_58718301_58718526_58718689_58719195_58719256_58722149_58722279_58723745_58723903_58734139
H1_mix_00034359	chr16	-	2458	11	NNC	ENSG00000125166.13	novel	2421	10	NA	NA	0	75192	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	370.288333599642	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGTTTTTAGGACATAT	0	True	NA	NA	False	NA	NA	NA	58734316	58631938	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_58631976_58707130_58708294_58709416_58709568_58716013_58716180_58716662_58716814_58718195_58718301_58718526_58718689_58719195_58719256_58722149_58722279_58723745_58723903_58734139
H1_mix_00034360	chr16	-	2867	8	FSM	ENSG00000103042.9	ENST00000564100.5	2867	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	72.2425054371506	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGGCTGGGCGCAGTGG	52	False	NA	NA	False	NA	NA	NA	58684707	58666371	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_58667488_58675939_58676055_58676288_58676347_58677325_58677425_58678332_58678475_58678695_58678895_58679856_58680242_58683954
H1_mix_00034365	chr16	-	981	5	FSM	ENSG00000125166.13	ENST00000496461.5	981	5	0	0	0	0	multi-exon	FALSE	canonical	3	1169	junction_3	44.5028089001133	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATAGCAACAGTGGTGAA	14	True	NA	NA	False	NA	NA	NA	58734302	58718216	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_58718689_58719195_58719256_58722149_58722279_58723745_58723903_58734139
H1_mix_00034366	chr16	-	361	1	FSM	ENSG00000278893.1	ENST00000624875.1	2105	1	497	1247	497	-1247	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCGGGTCTTTCTCTTCCA	NA	False	NA	NA	False	TATAAA	-3	NA	64982730	64982369	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_64982400_64982700
H1_mix_00034367	chr16	-	608	1	FSM	ENSG00000140937.14	ENST00000619158.1	3639	1	2988	43	2988	-43	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGACGAATCATTATGTC	NA	False	NA	NA	False	NA	NA	NA	64985346	64984738	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_64984700_64985300
H1_mix_00034376	chr16	-	1761	19	NIC	ENSG00000159593.15	novel	1813	20	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	23	junction_16	341.226419164464	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATAATGTAGTCTTGTTC	-16	True	NA	NA	False	AATAAA	-15	NA	66830959	66802881	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_66803119_66805776_66805827_66805911_66806027_66808520_66808614_66808988_66809076_66810373_66810414_66810696_66810773_66813563_66813698_66813786_66813847_66816580_66816673_66816964_66817029_66817424_66817488_66818527_66818638_66821449_66821560_66823226_66823307_66823528_66823601_66826522_66826584_66826676_66826781_66830846
H1_mix_00034377	chr16	-	1822	20	FSM	ENSG00000159593.15	ENST00000359087.8	1825	20	0	3	0	0	multi-exon	FALSE	canonical	0	0	junction_18	339.370698372926	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTAGTCTTGTTCTTTG	-33	True	NA	NA	False	AATAAA	-19	NA	66830976	66802877	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_66803119_66805776_66805827_66805911_66806027_66808520_66808614_66808988_66809076_66810373_66810414_66810696_66810773_66813563_66813698_66813786_66813847_66816580_66816673_66816964_66817029_66817424_66817488_66818527_66818638_66821449_66821560_66823226_66823307_66823528_66823601_66824854_66824886_66826522_66826584_66826667_66826781_66830846
H1_mix_00034385	chr16	-	779	2	FSM	ENSG00000166595.12	ENST00000569299.1	708	2	21	-92	0	92	multi-exon	FALSE	canonical	3	1181	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGGTTTGGACCAGGGG	-8	True	NA	NA	False	NA	NA	NA	66934402	66933376	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_66933740_66933986
H1_mix_00034386	chr16	-	3957	7	NIC	ENSG00000196123.13	novel	3500	8	NA	NA	0	-489	intron_retention	FALSE	canonical	3	20	junction_5	24.3356163312586	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACACACACACACACACAC	8	True	NA	NA	False	NA	NA	NA	67183963	67176092	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_67176976_67178009_67178108_67178198_67179563_67179814_67179959_67180040_67180667_67181557_67181698_67183261
H1_mix_00034388	chr16	-	2419	14	FSM	ENSG00000179044.16	ENST00000314586.11	2429	14	10	0	10	0	multi-exon	FALSE	canonical	1	1	junction_2	2.70217970311543	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGAGTCTGTGTGTGTT	-5	True	NA	0	True	AATAAA	-15	NA	67190126	67184378	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67184605_67184685_67184811_67184901_67185058_67185135_67185259_67185360_67185491_67186236_67186348_67186556_67186658_67186758_67186885_67187020_67187139_67187224_67187838_67188720_67188941_67189019_67189181_67189630_67189684_67189970
H1_mix_00034389	chr16	-	854	3	FSM	ENSG00000159713.11	ENST00000564104.5	1736	3	854	28	854	7	multi-exon	FALSE	canonical	1	3	junction_2	1.5	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACCTCAATAAAGACACCT	5216	False	NA	-31	True	NA	NA	NA	67391099	67389838	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67390363_67390478_67390633_67390923
H1_mix_00034395	chr16	-	1216	4	FSM	ENSG00000124074.12	ENST00000602942.5	1253	4	38	-1	38	0	multi-exon	FALSE	canonical	3	43	junction_3	15.2970585407784	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTCCATAAGAGCTTT	2933	False	NA	0	True	ATTAAA	-17	NA	67664474	67662944	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67663322_67663419_67663557_67663656_67663821_67663936
H1_mix_00034396	chr16	-	2166	14	FSM	ENSG00000102901.13	ENST00000440851.6	2200	14	38	-4	38	0	multi-exon	FALSE	canonical	2	3	junction_13	128.369658528677	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGCATTTTGGTGCAT	NA	False	NA	0	True	AATAAA	-16	NA	67835300	67828156	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67828391_67828473_67828579_67828666_67828844_67829422_67829517_67829764_67830089_67830389_67830549_67831215_67831359_67831575_67831613_67831753_67831891_67832011_67832109_67832227_67832316_67832454_67832546_67833749_67834101_67835171
H1_mix_00034399	chr16	-	1165	7	FSM	ENSG00000141086.18	ENST00000574481.6	1165	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	17.5063480549834	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACAGGCCATGGCATGAA	-2	True	NA	32	True	AATAAA	-18	NA	67931862	67929573	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67930096_67930184_67930319_67930407_67930589_67930725_67930808_67930919_67931000_67931097_67931202_67931800
H1_mix_00034402	chr16	-	851	5	FSM	ENSG00000205220.12	ENST00000570304.1	851	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	2.34520787991171	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCTTGTCGGAGGAGGT	-10	True	NA	NA	False	NA	NA	NA	67936847	67935327	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67935698_67935962_67936104_67936214_67936313_67936397_67936486_67936693
H1_mix_00034411	chr16	-	3228	13	FSM	ENSG00000103067.14	ENST00000251366.7	3228	13	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	60.2319590324679	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCAAGTGCTGTAAACATA	42	True	NA	-24	True	CATAAA	-36	NA	68236070	68229116	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_68230316_68230388_68230555_68230840_68231028_68231177_68231377_68231481_68231695_68231801_68232104_68232245_68232289_68232576_68232816_68233326_68233426_68233767_68233883_68233993_68234108_68235633_68235763_68235847
H1_mix_00034415	chr16	-	1489	1	FSM	ENSG00000279649.1	ENST00000623181.1	2704	1	1153	62	1153	-62	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCCTCAGGAAAGCTCAC	NA	False	NA	NA	False	NA	NA	NA	68291637	68290148	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_68290100_68291600
H1_mix_00034416	chr16	-	2935	5	NNC	ENSG00000168802.14	novel	2921	4	NA	NA	0	13017	intron_retention	FALSE	non_canonical	0	0	junction_1	239.412823382541	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAAACAGAGTTTACCT	4	True	NA	NA	False	NA	NA	NA	69132572	69104992	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_69105026_69118012_69120650_69121052_69121171_69121435_69121494_69132483
H1_mix_00034419	chr16	-	2834	4	NNC	ENSG00000168802.14	novel	2921	4	NA	NA	0	6851	intron_retention	FALSE	non_canonical	0	0	junction_1	247.165261852605	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTGGCCTAGAAATCCAG	-12	True	NA	NA	False	NA	NA	NA	69132588	69111158	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_69111190_69118009_69120650_69121435_69121494_69132483
H1_mix_00034420	chr16	-	755	4	NIC	ENSG00000168802.14	novel	2921	4	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	2	84	junction_1	143.351161681919	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTGTCACTGTGTTTT	-4	True	NA	-10	True	AATAAA	-15	NA	69132151	69118009	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_69118526_69121052_69121171_69121435_69121494_69132088
H1_mix_00034421	chr16	-	2761	3	FSM	ENSG00000286140.2	ENST00000306585.9	2761	3	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_2	56.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTGTCACTGTGTTTT	-4	True	NA	-10	True	AATAAA	-15	NA	69132151	69118009	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_69120650_69121435_69121494_69132088
H1_mix_00034425	chr16	-	1578	3	NNC	ENSG00000258429.2	novel	2859	2	NA	NA	0	4134	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	141	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTTTTTATTCTGGACCCA	0	True	NA	NA	False	NA	NA	NA	69330588	69322778	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_69322821_69328235_69329180_69329996
H1_mix_00034426	chr16	-	2980	10	NNC	ENSG00000132604.11	novel	2996	10	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	75.3826452830925	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGCTGTTTAATTGCAGCA	8	True	NA	2	True	ATTAAA	-23	NA	69385988	69355560	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_69357057_69357517_69357559_69361403_69361490_69366806_69367200_69368375_69368483_69370482_69370630_69372268_69372356_69384579_69384711_69385390_69385487_69385592
H1_mix_00034430	chr16	-	4516	25	NIC	ENSG00000196696.13	novel	2764	25	NA	NA	0	15	intron_retention	FALSE	canonical	3	13	junction_6	107.537461173098	3323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTATTGCTTTGTTTC	105	False	NA	NA	False	AATAAA	-36	NA	70065853	69976281	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_69978113_69978221_69978283_69982349_69982495_69982657_69982758_69986380_69986510_69990596_69990684_69992910_69993249_69996068_69996227_69996389_69996469_70010750_70010857_70011840_70011930_70014103_70014168_70018046_70018098_70021823_70021950_70023378_70023478_70023629_70023679_70024585_70024671_70030987_70031067_70031899_70031969_70034170_70034361_70036431_70036579_70038904_70039101_70042350_70042417_70042929_70043004_70065755
H1_mix_00034432	chr16	-	543	5	FSM	ENSG00000255185.6	ENST00000527016.1	543	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	53.1477892296566	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCAGAATTTTCAGGTAAA	13	True	NA	NA	False	NA	NA	NA	70065945	70036446	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_70036579_70038904_70038986_70042350_70042417_70042929_70043004_70065755
H1_mix_00034433	chr16	-	3312	20	NNC	ENSG00000261556.10	novel	1855	14	NA	NA	836	55	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_9	12.5722289920386	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTTGCTTTATTGAGG	6162	False	NA	-1	True	ATTAAA	-15	NA	70245774	70219814	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_70219992_70220720_70220881_70221253_70221402_70222370_70222481_70224855_70225112_70226769_70226974_70227117_70227261_70229737_70229893_70230993_70231159_70231326_70231524_70231911_70232112_70232663_70232805_70233423_70233526_70233614_70233703_70234173_70234293_70234996_70235159_70235312_70235444_70241035_70241261_70243626_70243800_70245518
H1_mix_00034435	chr16	-	3989	19	FSM	ENSG00000090861.17	ENST00000674652.1	3987	19	0	-2	0	0	multi-exon	FALSE	canonical	2	40	junction_14	388.064459454042	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGGCTGCTGTGGTG	-16	True	NA	-29	True	AATAAA	-10	NA	70289555	70252302	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258032_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289529
H1_mix_00034437	chr16	-	4245	20	FSM	ENSG00000090861.17	ENST00000675403.1	4243	20	0	-2	0	0	multi-exon	FALSE	canonical	2	914	junction_2	141.374397334194	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGGCTGCTGTGGTG	-18	True	NA	-29	True	AATAAA	-10	NA	70289557	70252302	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258032_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289420
H1_mix_00034441	chr16	-	2992	20	FSM	ENSG00000103051.20	ENST00000564415.6	3000	20	3	5	-1	0	multi-exon	FALSE	canonical	3	15	junction_16	121.290795461617	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGCCAGTGTGCTGTTA	-9	True	NA	-36	True	AATAAA	-14	NA	70523555	70480572	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_70481145_70481358_70481488_70481763_70481866_70482091_70482176_70482728_70482822_70483852_70483970_70490329_70490393_70496265_70496432_70497220_70497388_70497936_70498056_70500957_70501092_70508405_70508465_70509230_70509389_70509915_70510022_70512238_70512433_70514334_70514510_70515867_70516041_70517625_70517741_70519648_70519732_70523372
H1_mix_00034442	chr16	-	2762	18	FSM	ENSG00000103051.20	ENST00000674443.1	2761	18	0	-1	0	0	multi-exon	FALSE	canonical	3	15	junction_6	97.914128043854	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGCCAGTGTGCTGTTAC	-14	True	NA	-35	True	AATAAA	-15	NA	70523560	70480571	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_70481145_70481358_70481488_70481763_70481866_70482091_70482176_70482728_70482822_70483852_70483970_70496265_70496432_70497220_70497388_70497936_70498056_70500957_70501092_70508405_70508465_70509230_70509389_70509915_70510022_70512238_70512433_70514334_70514510_70517625_70517741_70519648_70519732_70523372
H1_mix_00034444	chr16	-	614	2	FSM	ENSG00000103051.20	ENST00000567244.1	723	2	109	0	109	0	multi-exon	FALSE	canonical	3	416	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGAGGAGTACTTCATGAG	NA	False	NA	NA	False	NA	NA	NA	70501488	70497972	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_70498056_70500957
H1_mix_00034446	chr16	-	760	3	Antisense	novelGene_ENSG00000157368.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	9	junction_2	23.5	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATATGAGTAAGACGGTCA	NA	False	NA	-10	True	AATAAA	-19	NA	70621510	70616499	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr16_-_70616926_70619646_70619935_70621464
H1_mix_00034449	chr16	-	632	2	FSM	ENSG00000180917.18	ENST00000568910.1	632	2	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACTAATAAAGCGGGGAAA	-26	True	NA	NA	False	AAGAAA	-29	NA	71289427	71285649	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_71285940_71289085
H1_mix_00034450	chr16	-	5024	1	FSM	ENSG00000167377.19	ENST00000576258.1	5053	1	29	0	29	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATGAGTACATTTTTAAT	9613	False	NA	5	True	AATAAA	-23	NA	71452620	71447596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_71447600_71452600
H1_mix_00034454	chr16	-	7898	18	NIC	ENSG00000040199.18	novel	4812	19	NA	NA	1	-21	combination_of_known_splicesites	FALSE	canonical	2	3	junction_16	9.20846609109601	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTTCATGGCTTTGTTT	31	True	NA	-25	True	AATAAA	-16	NA	71723881	71644948	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_71650045_71652789_71653022_71655239_71655435_71656570_71656682_71658232_71658364_71658652_71658816_71663898_71664100_71667177_71667334_71669274_71669371_71672261_71672323_71676446_71676650_71678754_71678986_71679388_71679536_71681750_71681906_71684475_71684602_71690518_71690710_71714511_71714802_71723768
H1_mix_00034459	chr16	-	1949	8	FSM	ENSG00000102984.15	ENST00000568961.5	1954	8	0	5	0	0	multi-exon	FALSE	canonical	1	2	junction_3	21.6049880861824	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCCCTTTCTTGCTTTTC	-8	True	NA	-10	True	AATAAA	-16	NA	71884172	71859684	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_71860673_71861775_71861943_71864137_71864243_71867911_71868038_71879906_71880024_71881316_71881435_71883210_71883274_71883907
H1_mix_00034470	chr16	-	577	2	FSM	ENSG00000168411.14	ENST00000572610.1	572	2	0	-5	0	5	multi-exon	FALSE	canonical	3	376	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGCATGGTGGCTCACGCC	NA	False	NA	NA	False	AAAACA	-12	NA	74644637	74643973	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_74644454_74644540
H1_mix_00034493	chr16	-	684	4	FSM	ENSG00000103121.9	ENST00000561614.5	683	4	0	-1	0	0	multi-exon	FALSE	canonical	2	3	junction_2	517.680081388754	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTCTCCTTTCTCTTAG	9758	False	NA	-10	True	AATAAA	-15	NA	80997372	80975800	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_80976180_80978241_80978416_80981805_80981878_80997313
H1_mix_00034499	chr16	-	2540	4	FSM	ENSG00000140905.11	ENST00000639169.1	2537	4	0	-3	0	0	multi-exon	FALSE	canonical	3	2157	junction_2	47.8400111482707	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACACTGCATTTGCTGGT	51	False	NA	-89	True	NA	NA	NA	81096336	81082404	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_81084595_81087600_81087665_81090600_81090681_81096130
H1_mix_00034502	chr16	-	3333	3	FSM	ENSG00000140943.18	ENST00000562886.1	3333	3	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_2	4.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGCTTAAAGATACTGTG	NA	False	NA	-26	True	AATAAA	-16	NA	84061631	84053773	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_84054646_84056004_84056136_84059301
H1_mix_00034514	chr16	-	925	5	FSM	ENSG00000153786.13	ENST00000566909.1	582	5	-343	0	-343	0	multi-exon	FALSE	canonical	3	210	junction_1	31.9247161302963	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCCACATGGGAGCGGAG	6349	False	NA	NA	False	NA	NA	NA	84982460	84976495	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_84976520_84977094_84977226_84977923_84978006_84979188_84979286_84981869
H1_mix_00034521	chr16	-	938	5	FSM	ENSG00000154102.11	ENST00000602766.1	832	5	16	-122	0	0	multi-exon	FALSE	canonical	2	2	junction_2	25.5575331360443	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCTCTGTAACAAATAGTG	39	False	85751117	77	True	AATAAA	-2	NA	85751096	85707531	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_85708067_85710163_85710286_85710409_85710474_85735189_85735236_85750925
H1_mix_00034524	chr16	-	2977	8	FSM	ENSG00000103248.19	ENST00000543303.6	1207	8	25	-1795	0	1	multi-exon	FALSE	canonical	3	19	junction_5	12.8603170684879	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTTTCACTGCCCTGTC	36	False	NA	0	True	AATAAA	-24	NA	86555178	86530176	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_86532482_86541696_86541823_86542100_86542214_86546558_86546650_86548463_86548578_86552178_86552293_86554644_86554749_86555168
H1_mix_00034527	chr16	-	525	3	FSM	ENSG00000260456.7	ENST00000565212.5	525	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	28.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCCACCTCTTAAATGAT	66	False	NA	-13	True	AATAAA	-22	NA	87306125	87302813	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_87303076_87305718_87305906_87306049
H1_mix_00034529	chr16	-	1959	12	NIC	ENSG00000104731.14	novel	4572	17	NA	NA	8	-43	intron_retention	FALSE	canonical	3	19	junction_1	32.3707857271806	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCGTTCCAAAGTGTCACA	36	True	NA	NA	False	AGTAAA	-22	NA	87765921	87703068	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_87703433_87708349_87708467_87709264_87709668_87711234_87711444_87714497_87714574_87726764_87726925_87730551_87730645_87748672_87748810_87755193_87755293_87756398_87756478_87761948_87762041_87765791
H1_mix_00034530	chr16	-	1868	12	NIC	ENSG00000104731.14	novel	1924	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	28.9210952777746	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCGCGGAGGGTGTCTTC	24	True	NA	NA	False	AATAAA	-18	NA	87765933	87707811	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_87708073_87708349_87708467_87709264_87709668_87711234_87711444_87714497_87714574_87726764_87726925_87730551_87730645_87748672_87748810_87755193_87755293_87756398_87756478_87761948_87762041_87765791
H1_mix_00034533	chr16	-	3171	5	FSM	ENSG00000051523.11	ENST00000569359.5	1415	5	42	-1798	0	0	multi-exon	FALSE	canonical	3	2481	junction_1	108.04484022849	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCGTGAGCCTCTGCCTGG	580	False	NA	-4	True	AATAAA	-17	NA	88650988	88643288	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_88646198_88646754_88646839_88647100_88647176_88648044_88648115_88650955
H1_mix_00034550	chr16	-	950	5	NNC	ENSG00000198931.11	novel	931	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	370	junction_3	1841.73328687951	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCCAATTACACACAGCG	2477	False	NA	-54	True	GGGGCT	-44	NA	88811880	88809517	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_88809841_88810069_88810149_88810422_88810557_88811303_88811657_88811819
H1_mix_00034565	chr16	-	2560	6	NNC	ENSG00000167522.17	novel	1097	4	NA	NA	0	2887	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	66.2963045727286	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGATAGAGAAGACACTCC	1185	False	NA	NA	False	AAAAAG	-5	NA	89490320	89295980	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_89296007_89298874_89300963_89305205_89305345_89316932_89317079_89418283_89418369_89490244
H1_mix_00034569	chr16	-	2804	6	FSM	ENSG00000131165.16	ENST00000551981.6	2797	6	0	-7	0	7	multi-exon	FALSE	canonical	3	465	junction_2	38.2591165606317	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTGCTTTGGAGCCTT	18	True	NA	0	True	AATAAA	-26	NA	89657675	89644427	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_89646088_89646526_89647332_89649350_89649498_89651568_89651647_89653903_89653924_89657581
H1_mix_00034586	chr16	-	2889	1	FSM	ENSG00000003249.15	ENST00000623401.1	2889	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCCTGGCCACAGTCTCT	1237	False	NA	-9	True	ATTAAA	-18	NA	90007761	90004872	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_90004900_90007800
H1_mix_00034588	chr16	+	211	1	Intergenic	novelGene_499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACCTGAATTTTCCCCAT	NA	False	NA	NA	False	NA	NA	NA	2680624	2680835	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_2680600_2680800
H1_mix_00034590	chr16	+	1172	1	Intergenic	novelGene_506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTGTTGTCACCATTT	NA	False	NA	NA	False	AATAAA	-19	NA	16571307	16572479	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_16571300_16572500
H1_mix_00034591	chr16	+	2574	1	Intergenic	novelGene_509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTGTTCTCTTGGTCGT	4856	False	NA	17	True	NA	NA	NA	19612641	19615215	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_19612600_19615200
H1_mix_00034593	chr16	+	203	1	Intergenic	novelGene_517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGACACCATATTCTGGAA	NA	False	NA	NA	False	NA	NA	NA	28654614	28654817	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_28654600_28654800
H1_mix_00034594	chr16	+	330	1	Intergenic	novelGene_521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGTTTTGTAATATCAC	NA	False	NA	NA	False	NA	NA	NA	34413967	34414297	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_34414000_34414300
H1_mix_00034595	chr16	+	291	1	Intergenic	novelGene_523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGACCTTCTGTTAGTGAC	NA	False	NA	NA	False	NA	NA	NA	35802429	35802720	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_35802400_35802700
H1_mix_00034597	chr16	+	449	1	Intergenic	novelGene_526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCTACTTTTCTTGAAGA	NA	False	NA	NA	False	TTTAAA	-13	NA	65276031	65276480	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_65276000_65276500
H1_mix_00034600	chr16	+	2798	1	FSM	ENSG00000289353.1	ENST00000691717.1	1743	1	-24	-1031	-24	1031	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAGAGTCTTATCTTAGG	360	False	NA	18	True	ATTAAA	-20	NA	66567131	66569929	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_66567100_66569900
H1_mix_00034601	chr16	+	1334	1	Intergenic	novelGene_528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCTCCAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69745883	69747217	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_69745900_69747200
H1_mix_00034608	chr16	+	279	1	FSM	ENSG00000278995.1	ENST00000624755.1	279	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATAAACAGCCTTGTTGC	3006	False	NA	-23	True	NA	NA	NA	74682	74961	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_74700_75000
H1_mix_00034609	chr16	+	648	1	FSM	ENSG00000269482.1	ENST00000601483.1	472	1	198	-374	198	374	mono-exon	FALSE	NA	NA	NA	NA	NA	234	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCATGGCCTGGAAAAGCC	NA	False	NA	NA	False	NA	NA	NA	90828	91476	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_90800_91500
H1_mix_00034610	chr16	+	526	3	FSM	ENSG00000188536.13	ENST00000397806.1	513	3	-11	-2	3	2	multi-exon	FALSE	canonical	1	2	junction_1	5.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGTGCCTGGGTTCTC	1	True	NA	NA	False	AATAAA	-19	NA	172878	173712	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_172959_173124_173330_173471
H1_mix_00034611	chr16	+	528	3	FSM	ENSG00000206172.8	ENST00000397797.1	504	3	-24	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTGTGCCTGAGTTT	0	True	NA	NA	False	AATAAA	-17	NA	176679	177522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_176763_176928_177134_177282
H1_mix_00034612	chr16	+	469	1	FSM	ENSG00000206168.1	ENST00000382990.1	339	1	68	-198	68	198	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTTACATACTTCATGC	NA	False	NA	NA	False	NA	NA	NA	231201	231670	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_231200_231700
H1_mix_00034614	chr16	+	2166	5	FSM	ENSG00000103202.13	ENST00000460297.1	1652	5	-499	-15	-16	0	multi-exon	FALSE	canonical	3	93	junction_1	936.60647419287	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGGTGGTACACTAATTA	NA	False	NA	22	True	ATTAAA	-18	NA	396708	400648	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_397314_398207_399124_399378_399481_399626_399740_400218
H1_mix_00034616	chr16	+	762	7	FSM	ENSG00000242612.7	ENST00000633348.1	762	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	67.7087307680643	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGCTCTCAGGGAGCCC	31	True	NA	NA	False	GGGGCT	-12	NA	401916	411076	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_402044_404955_405025_406345_406398_407424_407581_410208_410368_410690_410785_410971
H1_mix_00034617	chr16	+	702	2	FSM	ENSG00000242612.7	ENST00000465166.1	702	2	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACCGTGATGGACATCGA	862	False	NA	NA	False	NA	NA	NA	406945	410295	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_407561_410208
H1_mix_00034623	chr16	+	4734	13	NNC	ENSG00000103326.12	novel	4888	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_12	49.6221136860036	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACGCCTCCTCCTCCTGCT	-15	True	NA	22	True	AATAAA	-18	NA	527747	554636	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_528030_533945_533999_546816_548288_548992_549202_549287_549472_549614_549839_551301_551428_551511_551665_552050_552213_552300_552531_552604_552772_552862_553042_553342
H1_mix_00034624	chr16	+	595	3	FSM	ENSG00000007541.17	ENST00000439574.1	586	3	-9	0	-9	0	multi-exon	FALSE	canonical	1	3	junction_1	4.5	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGCGCCCACTGCCCCCG	-9	True	NA	NA	False	NA	NA	NA	569958	574409	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_570097_570647_570761_574065
H1_mix_00034625	chr16	+	2212	10	FSM	ENSG00000007541.17	ENST00000635909.1	2212	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	66.5081448646204	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATAAAACCTGCCCCGTG	-2	True	NA	-8	True	NA	NA	NA	574331	584083	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_574439_575838_575971_576133_576255_578378_578506_578784_578939_579068_579181_580182_580264_580857_580973_582247_582310_582882
H1_mix_00034626	chr16	+	6330	5	Fusion	ENSG00000197562.10_ENSG00000127578.7	novel	2718	6	NA	NA	-42	0	intron_retention	FALSE	canonical	3	43	junction_1	54.430575047486	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGGCTTGCTGCTGCT	362	False	NA	21	True	AATAAA	-21	NA	590023	634117	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr16_+_590434_625431_625510_625898_626122_627341_631425_632581
H1_mix_00034627	chr16	+	6623	40	NIC	ENSG00000161996.19	novel	5589	41	NA	NA	10	0	intron_retention	TRUE	canonical	3	27	junction_33	24.8638898354919	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATTGCTGCATTGTTGCA	-30	True	NA	32	True	AATAAA	-17	NA	649334	667829	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_649855_649990_650168_650253_650363_650538_650710_650994_651104_651198_651267_651643_651748_651823_652040_652466_652536_653340_653452_653524_653671_653745_653804_655028_655148_655306_655469_655572_655704_655772_655890_656301_656538_656731_656872_657090_657222_657761_657893_658182_658345_658524_658654_658895_659012_659085_659127_659244_659377_660057_660162_660611_660715_661050_661173_661341_661502_661596_661788_661890_662060_662219_662332_662672_663554_665678_665802_665949_666125_666219_666351_666454_666599_666672_666793_666904_666990_667431
H1_mix_00034628	chr16	+	4015	27	NNC	ENSG00000161996.19	novel	5589	41	NA	NA	1341	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	35.493561379612	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGCTGCATTGTTGCAC	3554	False	NA	33	True	AATAAA	-18	NA	653462	667830	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_653671_653745_653804_655306_655469_655572_655704_655772_655890_656301_656538_656731_656872_657090_657222_657761_657893_658182_658345_658568_658654_658895_659012_659244_659377_660611_660715_661050_661173_661341_661502_661596_661788_661890_662060_662219_662332_662672_662845_665678_665802_665949_666125_666219_666351_666454_666599_666672_666793_666904_666990_667431
H1_mix_00034629	chr16	+	2473	16	NNC	ENSG00000161996.19	novel	2257	12	NA	NA	449	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	33.8522278932027	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTATTGCTGCATTGTTG	9785	False	NA	30	True	AATAAA	-15	NA	659693	667827	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_659860_660057_660162_660611_660715_661050_661173_661341_661502_661596_661788_661890_662060_662219_662332_662672_662845_665678_665802_665949_666125_666219_666351_666454_666599_666672_666793_666904_666990_667431
H1_mix_00034631	chr16	+	1566	6	FSM	ENSG00000103269.14	ENST00000450775.2	1566	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	3.84707681233427	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGGGGGCTGTCCCGGGC	38	False	NA	14	True	AATAAA	-14	NA	675721	678267	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_675830_676335_676498_676671_676897_676970_677120_677275_677389_677458
H1_mix_00034632	chr16	+	760	1	FSM	ENSG00000261659.2	ENST00000575305.1	3413	1	-501	3154	-501	-3154	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGACTTTGTTTACCGTGC	2945	False	NA	NA	False	NA	NA	NA	688499	689259	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_688500_689300
H1_mix_00034633	chr16	+	1234	3	FSM	ENSG00000103254.10	ENST00000564640.5	908	3	-49	-277	0	0	multi-exon	FALSE	canonical	3	155	junction_1	29.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGACTCATGTTTTATG	513	False	NA	16	True	GATAAA	-16	NA	721096	722589	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_721437_721597_721703_721800
H1_mix_00034635	chr16	+	1503	8	NNC	ENSG00000103253.19	novel	1512	8	NA	NA	-400	0	intron_retention	FALSE	canonical	0	0	junction_7	63.1842139933637	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCAGTGTTGGCAGATG	21	False	NA	9	True	AATAAA	-14	NA	726535	729715	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_726634_727411_727615_727964_728030_728115_728234_728315_728425_728503_728605_728793_728896_729008
H1_mix_00034636	chr16	+	1243	9	NIC	ENSG00000103253.19	novel	1512	8	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	79.8995463065968	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCAGTGTTGGCAGATG	-1	True	NA	9	True	AATAAA	-14	NA	727103	729715	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_727141_727411_727615_727964_728030_728115_728234_728315_728425_728503_728605_728793_728896_729008_729089_729287
H1_mix_00034637	chr16	+	1235	7	NIC	ENSG00000103253.19	novel	1512	8	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	90.8431187389679	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCAGTGTTGGCAGATG	-24	True	NA	9	True	AATAAA	-14	NA	727273	729715	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_727615_727964_728030_728115_728234_728503_728605_728793_728896_729008_729089_729287
H1_mix_00034638	chr16	+	2199	3	FSM	ENSG00000103253.19	ENST00000567696.1	2199	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	42	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCAGTGTTGGCAGATG	20	True	NA	9	True	AATAAA	-14	NA	727317	729715	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_728030_728115_728896_729008
H1_mix_00034639	chr16	+	1217	7	ISM	ENSG00000103253.19	ENST00000389703.8	1512	8	645	0	12	0	3prime_fragment	FALSE	canonical	0	0	junction_5	82.0462268074123	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCAGTGTTGGCAGATG	453	False	NA	9	True	AATAAA	-14	NA	727750	729715	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_728030_728115_728234_728315_728425_728503_728605_728793_728896_729008_729089_729287
H1_mix_00034640	chr16	+	3072	22	NIC	ENSG00000127586.17	novel	3092	22	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	132.700334154844	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGTGCGAGTGGAGTGGG	-15	True	NA	29	True	TATAAA	-23	NA	788642	798074	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_788776_788927_789126_789209_789361_789546_789716_790176_790270_790346_790400_790524_790667_791160_791371_791850_791949_792223_792348_792438_792591_792717_792812_792965_793065_793143_793275_794053_794202_795131_795357_795684_795835_795946_796078_796716_796862_796960_797093_797693_797752_797838
H1_mix_00034641	chr16	+	3581	2	FSM	ENSG00000005513.10	ENST00000566034.1	4153	2	572	0	572	0	multi-exon	FALSE	canonical	3	48	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTGGGCTGCATTTTGTGT	886	False	NA	21	True	ATTAAA	-18	NA	982657	986978	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_983961_984700
H1_mix_00034642	chr16	+	2612	1	FSM	ENSG00000162009.9	ENST00000293897.6	2629	1	16	1	16	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCTTTCCCCGAGCAAA	15	False	NA	8	True	AATAAA	-17	NA	1078841	1081453	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1078800_1081500
H1_mix_00034643	chr16	+	231	1	FSM	ENSG00000260532.1	ENST00000561511.1	1773	1	49	1493	49	-1493	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCCCACGGGTCAGGCGC	NA	False	NA	NA	False	AAAACA	-19	NA	1111675	1111906	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1111700_1111900
H1_mix_00034644	chr16	+	5882	18	NIC	ENSG00000196557.13	novel	7815	33	NA	NA	-485	0	intron_retention	FALSE	canonical	3	19	junction_9	16.8200325448463	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCACTTGGATTCCTGC	1826	False	NA	NA	False	AATAAA	-17	NA	1208870	1221765	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_1209413_1210034_1210136_1210369_1210494_1210582_1210652_1210786_1210972_1211167_1211295_1211480_1211607_1211715_1211806_1211945_1212139_1212510_1213932_1214971_1215082_1215241_1215376_1215522_1215594_1216931_1217011_1217918_1218041_1218209_1218652_1218969_1219131_1219980
H1_mix_00034645	chr16	+	732	1	FSM	ENSG00000277010.1	ENST00000621827.1	505	1	-285	58	-285	-58	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCACCTCAGTAAGTTAAGA	NA	False	NA	-21	True	NA	NA	NA	1223353	1224085	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1223400_1224100
H1_mix_00034647	chr16	+	4585	34	FSM	ENSG00000007516.14	ENST00000397488.6	4583	34	-2	0	-2	0	multi-exon	TRUE	canonical	1	2	junction_3	8.73169080089442	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTCTCTGCCGTTTCTTG	-1	True	NA	10	True	AATATA	-17	NA	1333640	1349438	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1333750_1338539_1338681_1338901_1338990_1339112_1339245_1339495_1339604_1340921_1340982_1341128_1341196_1341293_1341490_1341821_1341867_1341985_1342064_1342180_1342284_1342526_1342635_1342718_1342815_1342912_1343017_1343392_1343514_1344021_1344147_1344226_1344318_1344468_1344526_1344600_1344699_1344797_1344850_1344968_1345100_1345248_1345373_1345746_1345891_1345985_1346079_1346169_1346362_1346441_1346511_1346604_1346685_1346846_1346956_1347297_1347370_1347544_1347626_1347700_1347822_1347893_1348018_1348095_1348302_1348378
H1_mix_00034650	chr16	+	2208	7	FSM	ENSG00000090581.11	ENST00000684100.1	2208	7	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_2	18.1628436344337	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCTATTAAAAGTCTTTG	9698	False	NA	NA	False	GATAAA	-31	NA	1361644	1364387	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1361956_1362037_1362132_1362205_1362321_1362451_1362535_1362610_1362743_1362824_1362907_1362996
H1_mix_00034651	chr16	+	365	2	FSM	ENSG00000260132.1	ENST00000568554.1	379	2	0	14	0	-14	multi-exon	FALSE	canonical	1	2	junction_1	0	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGTTCATAACACTATTA	NA	False	NA	NA	False	AATAAA	-4	NA	1408833	1412234	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1408893_1411928
H1_mix_00034652	chr16	+	1821	3	FSM	ENSG00000131634.14	ENST00000566264.2	1833	3	12	0	12	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTCTATAACTTGTGTT	-1	True	NA	NA	False	AATAAA	-15	NA	1533677	1555568	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1534556_1541920_1542077_1554781
H1_mix_00034655	chr16	+	1779	1	FSM	ENSG00000275092.1	ENST00000621884.1	722	1	-1057	0	-1057	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTATCATTCCTCCTTT	-6	True	NA	NA	False	TATAAA	-14	NA	1706194	1707973	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1706200_1708000
H1_mix_00034658	chr16	+	7022	8	FSM	ENSG00000197774.14	ENST00000568449.7	7022	8	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_4	11.9727581941468	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGACACCCATGACTCCG	0	True	NA	9	True	AATAAA	-27	NA	1772809	1781702	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1773475_1773704_1773842_1774259_1774353_1775040_1775133_1775314_1775409_1775568_1775685_1775796_1775987_1776067
H1_mix_00034661	chr16	+	1016	6	FSM	ENSG00000095906.17	ENST00000565603.5	995	6	-108	87	-44	0	multi-exon	FALSE	canonical	3	410	junction_2	113.73899946808	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTGGACGCGACGCCCG	NA	False	NA	NA	False	NA	NA	NA	1782887	1788680	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1783037_1786536_1786956_1787676_1787832_1787940_1788052_1788137_1788208_1788568
H1_mix_00034663	chr16	+	2893	1	FSM	ENSG00000180185.12	ENST00000427358.4	1974	1	9	-928	9	928	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATTTTCTTTTTTTTCTT	4	True	NA	NA	False	AATAGA	-16	NA	1826949	1829842	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1826900_1829800
H1_mix_00034664	chr16	+	1975	3	FSM	ENSG00000180185.12	ENST00000382666.6	1964	3	-17	6	9	-6	multi-exon	FALSE	canonical	0	0	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATTAGTTTTTCAATT	4	True	NA	NA	False	AATAAA	-10	NA	1826949	1840201	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1827866_1838015_1838135_1839261
H1_mix_00034665	chr16	+	964	2	FSM	ENSG00000140990.15	ENST00000565031.1	958	2	-6	0	0	0	multi-exon	FALSE	canonical	3	2740	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGAGGCAGCTGTGGGT	-4	True	NA	-50	True	NA	NA	NA	1959537	1961899	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1959755_1961152
H1_mix_00034666	chr16	+	653	4	NNC	ENSG00000140990.15	novel	675	4	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	1211.84267405743	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTCTGGTGTGATC	22	True	NA	26	True	TATAAA	-14	NA	1959563	1961975	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_1959755_1961152_1961296_1961496_1961637_1961796
H1_mix_00034667	chr16	+	813	3	NNC	ENSG00000140990.15	novel	830	3	NA	NA	6	0	intron_retention	FALSE	canonical	2	2	junction_2	1369	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTCTGGTGTGATC	22	True	NA	26	True	TATAAA	-14	NA	1959563	1961975	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_1959755_1961152_1961296_1961496
H1_mix_00034668	chr16	+	776	3	ISM	ENSG00000140990.15	ENST00000569148.1	628	4	12	0	6	0	intron_retention	FALSE	canonical	3	37	junction_2	1351.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTCTGGTGTGATC	22	True	NA	26	True	TATAAA	-14	NA	1959563	1961975	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_1959755_1961152_1961259_1961496
H1_mix_00034669	chr16	+	2502	22	NNC	ENSG00000183751.16	novel	6783	22	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_20	125.217633671592	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCGGTCCGGCCTCTCTCC	12	True	NA	14	True	CATAAA	-14	NA	1972085	1978683	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_1972206_1974055_1974108_1974196_1974293_1974375_1974424_1974537_1974680_1974762_1974848_1974927_1975099_1975186_1975263_1975344_1975439_1975528_1975711_1975807_1975950_1976055_1976115_1976210_1976315_1976813_1976962_1977053_1977285_1977355_1977427_1977513_1977671_1977741_1977801_1977957_1978062_1978148_1978221_1978314_1978472_1978551
H1_mix_00034670	chr16	+	1047	8	FSM	ENSG00000183751.16	ENST00000567615.1	1047	8	0	0	0	0	multi-exon	FALSE	canonical	3	543	junction_1	20.8942917700368	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCTGGAAAACCCATAAAGG	2590	False	NA	-17	True	NA	NA	NA	1977025	1978717	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1977285_1977355_1977427_1977513_1977671_1977741_1977801_1977957_1978062_1978148_1978221_1978312_1978472_1978551
H1_mix_00034671	chr16	+	531	2	FSM	ENSG00000127554.13	ENST00000569451.1	517	2	-14	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCTGTTGTGTCTCAGTT	-10	True	NA	23	True	ATTAAA	-15	NA	1984192	1986112	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_1984477_1985865
H1_mix_00034672	chr16	+	915	5	FSM	ENSG00000065054.14	ENST00000564033.1	1087	5	172	0	172	0	multi-exon	FALSE	canonical	3	127	junction_4	8.13557004763649	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGCCCCTGCCCACCAG	230	False	NA	NA	False	NA	NA	NA	2036152	2038128	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2036504_2036727_2036882_2036954_2036999_2037537_2037601_2037825
H1_mix_00034673	chr16	+	5317	39	ISM	ENSG00000103197.18	ENST00000642797.1	5388	40	583	9	1	-1	3prime_fragment	FALSE	canonical	3	43	junction_24	55.5683552506564	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCAGACAGCTCTTTTA	607	False	NA	38	True	AATAAA	-42	NA	2048623	2088709	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_2048754_2050399_2050487_2053341_2053453_2054295_2054441_2055401_2055520_2056195_2056245_2056643_2056770_2057104_2057179_2058746_2058874_2060669_2060814_2061870_2062009_2062496_2062601_2062971_2063054_2064271_2064428_2065518_2065636_2070455_2070579_2071509_2071617_2071783_2071935_2072240_2072364_2072848_2072984_2074199_2074390_2075798_2075893_2076067_2076171_2076490_2076586_2079031_2079197_2079275_2079429_2079556_2079670_2080164_2080378_2081594_2081799_2083694_2083817_2084227_2084716_2084950_2085027_2085229_2085323_2086192_2086380_2086731_2086872_2087862_2087942_2088047_2088140_2088226_2088326_2088445
H1_mix_00034675	chr16	+	600	3	FSM	ENSG00000259933.6	ENST00000570072.5	600	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	0.5	197	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCCAGCACTTCAGGAG	7	True	NA	NA	False	GATAAA	-36	NA	2091435	2095017	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2091615_2092888_2093013_2094720
H1_mix_00034676	chr16	+	1644	8	NNC	ENSG00000167964.13	novel	1674	9	NA	NA	-4	-10	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_6	8.08879295250975	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGAAAAAAATCCACTTCT	-4	True	NA	25	True	AATAAA	-31	NA	2148619	2154155	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_2148979_2149940_2150052_2151568_2151611_2151694_2151762_2151855_2151909_2152819_2152886_2153113_2153223_2153318
H1_mix_00034681	chr16	+	2496	14	FSM	ENSG00000167967.16	ENST00000564139.5	2493	14	-3	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	44.3263849458408	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGATGTTGTGGCAGT	-6	True	NA	15	True	AATAAA	-16	NA	2223590	2235742	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2223771_2228371_2228524_2229569_2229676_2232170_2232365_2232455_2232577_2232755_2232909_2233010_2233184_2233437_2233648_2233881_2233991_2234170_2234389_2234582_2234782_2234858_2234950_2235080_2235144_2235215
H1_mix_00034682	chr16	+	2697	14	NIC	ENSG00000167967.16	novel	2548	14	NA	NA	10	3	combination_of_known_junctions	FALSE	canonical	2	17	junction_1	40.7008134196081	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGTTGTGGCAGTGGC	7	True	NA	18	True	AATAAA	-19	NA	2223603	2235745	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_2223930_2228371_2228524_2229569_2229676_2232170_2232365_2232455_2232577_2232755_2232909_2233010_2233184_2233437_2233648_2233881_2233991_2234170_2234389_2234582_2234782_2234858_2235002_2235080_2235144_2235215
H1_mix_00034684	chr16	+	7141	13	NIC	ENSG00000140992.19	novel	7184	14	NA	NA	-9	0	intron_retention	TRUE	canonical	1	6	junction_6	17.1923351784709	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTTTGCTGGCGTGGCTC	1	True	NA	15	True	AATAAA	-17	NA	2537987	2603188	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_2538137_2557702_2557964_2561479_2561523_2561770_2561909_2565552_2565698_2566355_2566454_2581294_2581364_2581606_2581704_2583411_2583586_2586675_2586894_2595792_2595851_2597122_2597276_2597650
H1_mix_00034685	chr16	+	2210	8	FSM	ENSG00000167978.17	ENST00000576894.5	2210	8	0	0	0	0	multi-exon	FALSE	canonical	3	870	junction_1	275.386185238854	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTCCTAGTTCTCTTA	-10	True	NA	NA	False	AATAAA	-24	NA	2752661	2760621	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2752847_2756333_2756607_2757471_2757946_2758469_2758548_2758984_2759048_2759139_2759173_2759351_2759403_2759568
H1_mix_00034686	chr16	+	9012	15	NNC	ENSG00000167978.17	novel	9044	15	NA	NA	2	-1	intron_retention	FALSE	canonical	3	34	junction_13	655.500214044393	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGGGTCTGTAGACTGT	-8	True	NA	15	True	AATAAA	-15	NA	2752663	2771409	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_2752847_2756333_2756607_2757471_2757580_2757780_2757946_2758469_2758548_2758984_2759048_2759139_2759173_2759351_2759403_2759568_2759662_2760300_2760500_2761560_2768262_2768996_2769285_2770351_2770466_2770606_2770718_2770857
H1_mix_00034688	chr16	+	915	4	FSM	ENSG00000162076.13	ENST00000293981.10	915	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	114.624023078352	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCAGGCTTCTGGGTCCTT	-3	True	NA	29	True	AATAAA	-43	NA	2883212	2899382	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2883273_2895219_2895321_2896351_2896772_2899048
H1_mix_00034689	chr16	+	500	2	FSM	ENSG00000162076.13	ENST00000572786.1	521	2	21	0	21	0	multi-exon	FALSE	canonical	1	9	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCAGGTTTTAAACATCC	NA	False	NA	12	True	AATAAA	-26	NA	2898775	2899365	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2898959_2899048
H1_mix_00034690	chr16	+	2378	3	FSM	ENSG00000162073.14	ENST00000576565.1	842	3	-85	-1451	-14	0	multi-exon	FALSE	canonical	1	4	junction_1	78	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTTCTGGAACTTCTT	4980	False	NA	9	True	AATAAA	-15	NA	2969255	2973482	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_2969444_2971156_2971379_2971514
H1_mix_00034691	chr16	+	1169	1	FSM	ENSG00000272079.2	ENST00000607794.2	1269	1	100	0	100	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGTCTGCCCAGGTGTA	2003	False	NA	6	True	AATAAA	-20	NA	3006219	3007388	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3006200_3007400
H1_mix_00034693	chr16	+	788	6	FSM	ENSG00000008517.19	ENST00000008180.13	1056	6	0	268	0	0	multi-exon	FALSE	canonical	1	2	junction_3	8.10925397308532	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCGGAGGTGGGTTTCCCA	-6	True	NA	25	True	AATAAA	-38	NA	3065630	3069551	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3065688_3065783_3065827_3067376_3067416_3067983_3068011_3068179_3068240_3068989
H1_mix_00034694	chr16	+	2877	3	NIC	ENSG00000006194.10	novel	3282	6	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGTGAGTCTTCAATGA	29	True	NA	NA	False	AATAAA	-20	NA	3283523	3291460	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_3284206_3286022_3286150_3289392
H1_mix_00034695	chr16	+	653	1	FSM	ENSG00000279031.1	ENST00000622977.1	525	1	-218	90	-218	-90	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCCTTTGCCTTCCGCCA	5230	False	NA	-84	True	NA	NA	NA	3292660	3293313	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3292700_3293300
H1_mix_00034698	chr16	+	3145	8	FSM	ENSG00000122390.19	ENST00000649205.1	3142	8	-3	0	3	0	multi-exon	FALSE	canonical	0	0	junction_7	159.470552588423	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGTTCTGTCTCATTACGA	2	True	NA	-30	True	NA	NA	NA	3443690	3486909	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3443838_3447481_3447621_3448470_3448541_3476221_3476338_3479470_3479601_3482501_3482599_3483362_3483598_3484698
H1_mix_00034700	chr16	+	8552	10	FSM	ENSG00000213918.11	ENST00000407479.5	8552	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	8.40340906719513	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGTTTCGTTTTTCAGC	1	True	NA	NA	False	AATAAA	-26	NA	3642937	3665472	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_3643037_3654960_3655045_3655372_3655521_3655848_3655938_3656101_3656186_3656637_3656754_3656998_3657112_3657186_3657342_3657719_3657817_3657905
H1_mix_00034705	chr16	+	443	1	FSM	ENSG00000277440.1	ENST00000616838.1	582	1	143	-4	143	4	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGCGTTACTATCTC	4795	False	NA	12	True	ATTAAA	-26	NA	4430664	4431107	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4430700_4431100
H1_mix_00034706	chr16	+	3071	3	FSM	ENSG00000168101.14	ENST00000590460.1	709	3	-1795	-567	-1728	0	multi-exon	FALSE	canonical	1	33	junction_1	184	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCCTGTGTGTTTGTTT	NA	False	NA	28	True	AATAAA	-32	NA	4691965	4695859	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_4693880_4693983_4694239_4694957
H1_mix_00034707	chr16	+	1327	3	NNC	ENSG00000168101.14	novel	1406	3	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	255	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCAGCTGCCCTGTGTGTT	54	False	NA	23	True	AATAAA	-27	NA	4693770	4695854	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_4693880_4693977_4694299_4694957
H1_mix_00034708	chr16	+	5629	17	NIC	ENSG00000118900.15	novel	6443	18	NA	NA	-216	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_16	24.1433705962941	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTTTCTCACTCTTTTC	217	False	NA	21	True	AATAAA	-21	NA	4848163	4882360	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_4848211_4852878_4853167_4857989_4858077_4858567_4858664_4859024_4859160_4859864_4859969_4860663_4861103_4868832_4868904_4870211_4870342_4870515_4870635_4870843_4870973_4871154_4871302_4872883_4872935_4873030_4873074_4874210_4875435_4876870_4877112_4880082
H1_mix_00034709	chr16	+	1019	8	ISM	ENSG00000103184.12	ENST00000251170.12	6445	16	29825	15648	28900	11639	internal_fragment	FALSE	canonical	2	10	junction_7	3.97953950776689	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGACCCTGGGTCGGCTGC	NA	False	NA	NA	False	NA	NA	NA	4988154	5003509	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_4988281_4990766_4990896_4991837_4992031_4996347_4996461_4996854_4997045_5000654_5000744_5000854_5000926_5003401
H1_mix_00034710	chr16	+	4971	5	ISM	ENSG00000103184.12	ENST00000251170.12	6445	16	47583	6	46658	-6	3prime_fragment	FALSE	canonical	2	12	junction_3	1.29903810567666	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGAGGTTTTTTGTGTGT	2802	False	NA	7	True	NA	NA	NA	5005912	5019151	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_5006049_5007351_5007487_5008420_5008649_5011094_5011274_5014858
H1_mix_00034712	chr16	+	1627	11	NIC	ENSG00000067365.15	novel	4974	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	7	junction_1	80.750541793848	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTTGAGATTTTGTCAT	12	True	NA	21	True	AGTAAA	-22	NA	8621709	8646222	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_8621776_8623852_8624119_8625495_8625799_8628729_8629111_8635038_8635080_8635167_8635313_8639090_8639163_8641130_8641185_8642126_8642208_8642462_8642566_8646107
H1_mix_00034713	chr16	+	3325	5	Fusion	ENSG00000287830.1_ENSG00000283221.1	novel	1797	2	NA	NA	-120255	0	multi-exon	FALSE	canonical	3	22	junction_4	6.17960354715414	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCCCAGAACTGAGAATAAA	NA	False	NA	-31	True	NA	NA	NA	9674381	9810726	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr16_+_9674462_9794521_9794723_9805478_9805525_9807654_9810392_9810465
H1_mix_00034714	chr16	+	3439	4	Fusion	ENSG00000287830.1_ENSG00000283221.1	novel	179	2	NA	NA	-120255	40	intron_retention	FALSE	canonical	3	33	junction_2	2.05480466765633	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTTGTTATTGGTTATG	NA	False	NA	9	True	AATAAA	-21	NA	9674381	9810766	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr16_+_9674462_9794521_9794723_9805478_9805525_9807654
H1_mix_00034715	chr16	+	517	4	FSM	ENSG00000103274.11	ENST00000574691.1	517	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	129.632814775683	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCCGAGGCCTGTTTCAC	1330	False	NA	23	True	AATAAA	-16	NA	10758010	10769351	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_10758028_10761363_10761475_10767948_10768033_10769046
H1_mix_00034716	chr16	+	3157	22	NIC	ENSG00000038532.16	novel	3365	21	NA	NA	-4	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_21	15.2943900612917	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCTGCTGCACCTTGCTC	-14	True	NA	NA	False	AATAAA	-15	NA	10944576	11150314	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_10944798_10957781_10957911_10962454_10962589_10969160_10969310_10971124_10971231_10972937_10973062_10977224_10977400_10979328_10979383_10982877_10982992_11003073_11003258_11020192_11020326_11024820_11024922_11039753_11039877_11042253_11042364_11044027_11044073_11047291_11047343_11051512_11051642_11060901_11061023_11120614_11120767_11123741_11123947_11125978_11126147_11149885
H1_mix_00034717	chr16	+	6627	23	NIC	ENSG00000038532.16	novel	6812	24	NA	NA	158	1	combination_of_known_junctions	FALSE	canonical	3	12	junction_10	13.6521121182495	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGAATGTAGCGTGCTGC	148	False	NA	24	True	AATAAA	-16	NA	10944738	11182182	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_10944798_10957781_10957911_10962454_10962589_10969160_10969310_10971124_10971231_10972937_10973062_10977224_10977400_10979328_10979383_10982877_10982992_11003073_11003306_11020192_11020326_11024820_11024922_11039753_11039877_11042253_11042364_11044027_11044073_11047291_11047343_11051512_11051642_11060901_11061023_11120614_11120767_11123741_11123947_11125978_11126147_11166387_11166553_11178334
H1_mix_00034719	chr16	+	479	1	FSM	ENSG00000274038.1	ENST00000615581.1	479	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGAATACAGTGTTTTT	948	False	NA	NA	False	ACTAAA	-15	NA	11056555	11057034	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_11056600_11057000
H1_mix_00034720	chr16	+	6749	5	FSM	ENSG00000237515.9	ENST00000558583.3	6749	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	38.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTTGGGATTGTCATGT	-3	True	NA	4	True	AATAAA	-16	NA	12901597	13240416	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_12902628_12916687_12916816_13203393_13203550_13213252_13213301_13235029
H1_mix_00034721	chr16	+	3266	9	ISM	ENSG00000175595.16	ENST00000682617.1	6918	12	16	15300	0	321	5prime_fragment	FALSE	canonical	0	0	junction_2	18.2854963017141	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGGGACTACAGGCATGT	-16	True	NA	NA	False	NA	NA	NA	13920153	13937048	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_13920373_13922030_13922212_13926153_13926292_13926560_13926757_13928027_13928236_13930709_13930891_13932156_13932286_13934191_13934303_13935145
H1_mix_00034722	chr16	+	8737	16	NIC	ENSG00000186260.17	novel	7897	5	NA	NA	0	0	intron_retention	FALSE	canonical	2	27	junction_1	15.8921364202551	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATGATTCTTGCTGTGCA	NA	False	NA	14	True	AATAAA	-15	NA	14092836	14266772	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_14092883_14140543_14140761_14210242_14210309_14212353_14212410_14213544_14213621_14217125_14217288_14218819_14218999_14234145_14234284_14240236_14240485_14245527_14245661_14246472_14247508_14248925_14249082_14251861_14252024_14252364_14252503_14258100_14258162_14260908
H1_mix_00034723	chr16	+	1744	2	FSM	ENSG00000262454.4	ENST00000668516.1	1740	2	-8	4	-7	-4	multi-exon	FALSE	canonical	2	6	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCAGTGGTGTGATATTGG	-6	True	NA	NA	False	NA	NA	NA	14302237	14327396	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_14302598_14326012
H1_mix_00034724	chr16	+	1683	2	FSM	ENSG00000262454.4	ENST00000570945.2	3219	2	-7	1543	-7	-4	multi-exon	FALSE	canonical	3	7	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCAGTGGTGTGATATTGG	-6	True	NA	NA	False	NA	NA	NA	14302237	14327396	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_14302537_14326012
H1_mix_00034727	chr16	+	393	3	NNC	ENSG00000224712.12	novel	954	7	NA	NA	754	-4851	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	104	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTCTGTTGGAGTCCC	NA	False	NA	NA	False	NA	NA	NA	14712442	14719927	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_14712606_14716067_14716197_14719826
H1_mix_00034728	chr16	+	996	5	NNC	ENSG00000224712.12	novel	1155	8	NA	NA	8431	-598	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_4	69.2206616553179	115	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGCTGTCGGCAGTACT	NA	False	NA	NA	False	NA	NA	NA	14720119	14725695	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_14720235_14723191_14723300_14724317_14724379_14724487_14724524_14725019
H1_mix_00034729	chr16	+	690	5	ISM	ENSG00000224712.12	ENST00000552140.5	1053	8	8503	-31	8503	-14	3prime_fragment	FALSE	canonical	3	28	junction_4	66.2660357951191	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATACTGCAGTCCTTATG	NA	False	NA	NA	False	AATAAA	-21	NA	14720191	14726324	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_14720235_14723191_14723300_14724317_14724379_14724487_14724524_14725882
H1_mix_00034730	chr16	+	2441	4	ISM	ENSG00000254852.8	ENST00000553201.1	1053	8	8071	-49	8071	49	intron_retention	FALSE	canonical	3	147	junction_1	9.41629792788369	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTGCTTTGTTTCAAT	NA	False	NA	NA	False	AATAAA	-39	NA	14758883	14765462	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_14759047_14759209_14759355_14762311_14762420_14763437
H1_mix_00034731	chr16	+	8079	37	NNC	ENSG00000183458.14	novel	6919	32	NA	NA	-125	16348	intron_retention	TRUE	canonical	3	63	junction_21	91.8633580009455	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATACTGCAGTCCTTATG	NA	False	NA	NA	False	AATAAA	-21	NA	14911425	14952056	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_14911908_14917539_14917612_14917732_14917805_14918072_14918243_14918454_14919127_14919244_14919429_14919862_14920084_14920271_14920388_14920797_14920925_14921279_14921528_14922000_14922757_14923654_14923787_14923976_14924153_14924504_14924639_14925732_14925877_14926003_14926284_14926376_14926591_14926656_14926817_14927206_14927360_14928380_14928526_14929250_14929422_14929519_14930323_14930502_14930756_14930879_14931076_14932570_14932742_14932827_14932972_14933065_14933277_14933366_14933494_14935159_14935398_14937564_14937651_14941811_14941941_14945573_14945674_14945836_14945982_14948929_14949038_14950049_14950111_14950219_14950256_14951614
H1_mix_00034732	chr16	+	4159	23	NNC	ENSG00000183426.17	novel	5345	28	NA	NA	-1326	0	intron_retention	FALSE	canonical	3	28	junction_15	101.881798307874	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATACTGCAGTCCTTATG	NA	False	NA	NA	False	AATAAA	-21	NA	14925956	14952056	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_14926284_14926376_14926591_14926656_14926817_14927206_14927360_14928380_14928526_14929250_14929422_14929519_14929714_14930165_14930323_14930502_14930756_14930879_14931076_14932570_14932742_14932827_14932972_14933065_14933277_14933366_14933494_14935159_14935398_14937373_14937651_14941811_14941941_14945573_14945674_14945836_14945982_14948929_14949038_14950049_14950111_14950219_14950256_14951614
H1_mix_00034733	chr16	+	1915	6	FSM	ENSG00000183426.17	ENST00000534720.1	1915	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	118.229268795844	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAATTCCCACCTCATTTT	NA	False	NA	NA	False	AATGAA	-26	NA	14941819	14950700	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_14941941_14945573_14945674_14945836_14945982_14948929_14949937_14950049_14950111_14950219
H1_mix_00034734	chr16	+	529	6	FSM	ENSG00000179889.20	ENST00000563522.5	556	6	27	0	27	0	multi-exon	FALSE	canonical	0	0	junction_1	275.216714608688	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATTTCCACGAAGAGGAA	95	False	NA	NA	False	NA	NA	NA	14974829	15006410	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_14974974_14997752_14997827_14998339_14998406_15001775_15001857_15004186_15004334_15006393
H1_mix_00034735	chr16	+	4844	22	FSM	ENSG00000179889.20	ENST00000570001.5	4828	22	-16	0	0	0	multi-exon	FALSE	canonical	3	432	junction_17	97.1860781534479	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGTGAATTCAGTTTATAA	15	False	NA	18	True	AATAAA	-18	NA	14975088	15037687	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_14975221_14997752_14997827_14998339_14998406_15001775_15001857_15004186_15004334_15006393_15006584_15008778_15008848_15009680_15009760_15016128_15016214_15017119_15017169_15017320_15017423_15018839_15018966_15022703_15022755_15026642_15026707_15028877_15028967_15029950_15030057_15031734_15032980_15033277_15033400_15034285_15034379_15034456_15034554_15035448_15035554_15036015
H1_mix_00034736	chr16	+	381	2	Antisense	novelGene_ENSG00000270580.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	148	junction_1	0	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGCCAAAGGAGGGAATGT	9831	False	NA	NA	False	NA	NA	NA	15104310	15104762	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr16_+_15104409_15104479
H1_mix_00034737	chr16	+	1268	1	FSM	ENSG00000207294.1	ENST00000384564.1	100	1	-535	-633	-535	633	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	15150161	15151429	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_15150200_15151400
H1_mix_00034738	chr16	+	8515	32	NNC	ENSG00000244257.5	novel	6805	32	NA	NA	9	15267	intron_retention	FALSE	canonical	2	3	junction_6	111.930305727585	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAGCTGGAATCAACTTC	215	False	NA	NA	False	NA	NA	NA	16310349	16349457	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_16310563_16316190_16316263_16316383_16316456_16316723_16316894_16317105_16317778_16317895_16318080_16318922_16319039_16319448_16319576_16319930_16322804_16323155_16323290_16324383_16324528_16324654_16324935_16325027_16325242_16325307_16325468_16325857_16326011_16326864_16327010_16327735_16328356_16328650_16328808_16328987_16329223_16329364_16329561_16331057_16331229_16331314_16331459_16331552_16331764_16331853_16331981_16333646_16333764_16340305_16340435_16344044_16344145_16344307_16344453_16347402_16347511_16348526_16348588_16348696_16348733_16349228
H1_mix_00034739	chr16	+	571	3	FSM	ENSG00000183889.12	ENST00000540039.5	571	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	73.5	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGACCCCTGATGCCTCT	7309	False	NA	NA	False	NA	NA	NA	16317443	16318975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_16317778_16317895_16318080_16318922
H1_mix_00034740	chr16	+	6021	33	NNC	ENSG00000244257.5	novel	6805	32	NA	NA	7103	15957	intron_retention	FALSE	canonical	3	88	junction_18	100.127296907175	129	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCACAGCTGAAACTTTAA	7309	False	NA	NA	False	NA	NA	NA	16317443	16350147	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_16317778_16317895_16318080_16318513_16318735_16318922_16319039_16319448_16319576_16319930_16320179_16320651_16321408_16322305_16322438_16322627_16322804_16323155_16323290_16324383_16324528_16324654_16324935_16325027_16325242_16325307_16325468_16325857_16326011_16326864_16327010_16327735_16327907_16328004_16328199_16328650_16328808_16328987_16329241_16329364_16329561_16331057_16331229_16331314_16331459_16331552_16331764_16331853_16331981_16333646_16333885_16340305_16340435_16344044_16344145_16344307_16344453_16347402_16347511_16348526_16348588_16348696_16348733_16350091
H1_mix_00034741	chr16	+	265	2	Intergenic	novelGene_503	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGAGACCTTGGCTCTGT	NA	False	NA	NA	False	GGGGCT	-11	NA	16351795	16355862	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_16351807_16355608
H1_mix_00034742	chr16	+	802	2	ISM	ENSG00000227827.3	ENST00000532739.1	9932	31	511	19759	511	-19759	internal_fragment	FALSE	canonical	3	160	junction_1	0	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGTTCAGGCCTGGAGG	NA	False	NA	NA	False	NA	NA	NA	16356734	16357748	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_16356927_16357138
H1_mix_00034743	chr16	+	1584	8	Fusion	ENSG00000227827.3_ENSG00000214967.5	novel	561	5	NA	NA	-2947	-297	multi-exon	FALSE	canonical	3	99	junction_4	59.8395814674876	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCACAGCTGAAACTTTAA	NA	False	NA	NA	False	NA	NA	NA	16376107	16393511	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr16_+_16377057_16383663_16383793_16387398_16387499_16387661_16387807_16390766_16390875_16391890_16391952_16392060_16392097_16393455
H1_mix_00034744	chr16	+	561	5	FSM	ENSG00000214967.5	ENST00000344087.4	561	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	99.8711670103038	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCCCCTTCCACCCTCAG	NA	False	NA	NA	False	NA	NA	NA	16390833	16393808	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_16390875_16391890_16391952_16392060_16392097_16392592_16392663_16393455
H1_mix_00034745	chr16	+	618	1	FSM	ENSG00000206927.1	ENST00000384200.1	100	1	-523	5	-523	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTAAAGACACACATATACA	NA	False	NA	NA	False	NA	NA	NA	18397413	18398031	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_18397400_18398000
H1_mix_00034746	chr16	+	388	3	ISM	ENSG00000256340.9	ENST00000546162.6	2943	11	-26	23955	0	834	5prime_fragment	FALSE	canonical	1	1	junction_2	23	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTCTTGATTTCATAGCA	NA	False	NA	NA	False	AATATA	-40	NA	18571161	18574373	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_18571312_18572876_18573061_18574319
H1_mix_00034748	chr16	+	2719	8	NNC	ENSG00000103528.17	novel	3088	8	NA	NA	352	-2	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	18.4678429842198	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTCGAGTTATCTTTTT	51	False	NA	11	True	ATTAAA	-19	NA	19168611	19268330	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_19168662_19172754_19172778_19173429_19173579_19180390_19180540_19183527_19184148_19223044_19223166_19224682_19224839_19266879
H1_mix_00034751	chr16	+	830	8	FSM	ENSG00000174628.16	ENST00000564186.5	882	8	-1	53	0	-53	multi-exon	FALSE	canonical	3	37	junction_5	19.0220065895761	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTGCTGGATTCACTG	-14	True	NA	NA	False	AAAAAG	-1	NA	19718278	19827137	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_19718488_19730429_19730495_19733697_19733828_19735352_19735451_19763847_19763901_19764034_19764113_19788837_19788923_19827025
H1_mix_00034752	chr16	+	2697	20	NIC	ENSG00000005189.20	novel	2691	20	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_1	9.89193689387803	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGGGATGTCCACAGAT	10	False	NA	11	True	AATAAA	-20	NA	20806536	20849665	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_20806722_20806951_20807092_20813189_20813303_20814926_20815054_20816115_20816213_20821761_20821903_20824438_20824528_20825832_20825949_20827057_20827197_20827352_20827448_20828434_20828538_20832155_20832260_20833002_20833124_20839754_20839860_20840330_20840469_20843933_20844027_20844628_20844846_20845053_20845242_20846220_20846340_20849398
H1_mix_00034753	chr16	+	1433	4	Antisense	novelGene_ENSG00000169246.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	27.8128667266709	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGAGCAGACACTCGGGA	NA	False	NA	NA	False	NA	NA	NA	21402152	21405118	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr16_+_21403159_21403284_21403424_21404773_21405026_21405082
H1_mix_00034754	chr16	+	1858	5	Antisense	novelGene_ENSG00000169246.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	248.962346550638	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGAGCAGACACTCGGGA	NA	False	NA	NA	False	NA	NA	NA	21402152	21405118	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr16_+_21402712_21403215_21403424_21403549_21404158_21404521_21404969_21405082
H1_mix_00034755	chr16	+	565	6	FSM	ENSG00000140740.11	ENST00000565331.5	565	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	390.125620794123	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACCAATAAAACATATTTT	16	True	NA	NA	False	NA	NA	NA	21953386	21965505	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_21953457_21957416_21957567_21958534_21958600_21962459_21962517_21962760_21962886_21965407
H1_mix_00034756	chr16	+	586	3	FSM	ENSG00000140740.11	ENST00000618892.1	586	3	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	462.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGGGTGCAGAAGGGATG	4117	False	NA	NA	False	AATAAA	-16	NA	21957487	21959780	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_21957567_21958534_21958600_21959338
H1_mix_00034759	chr16	+	2467	21	FSM	ENSG00000058600.16	ENST00000564209.5	2464	21	-3	0	-1	0	multi-exon	FALSE	canonical	1	8	junction_19	50.3403168444538	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGAAATTCCTGATGTA	-12	True	NA	-56	True	NA	NA	NA	22297407	22333935	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_22297538_22302930_22303005_22305155_22305207_22308147_22308226_22308924_22309041_22309427_22309511_22313619_22313728_22314078_22314129_22315088_22315209_22316600_22316687_22316994_22317040_22317114_22317207_22318825_22318947_22322849_22322932_22324353_22324414_22324502_22324661_22325204_22325267_22325760_22326279_22328509_22328588_22332122_22332186_22333643
H1_mix_00034760	chr16	+	2837	22	NNC	ENSG00000243716.11	novel	5708	23	NA	NA	1148	-68	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	319.866723946764	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGGATTGCCCTACTGGC	6236	False	NA	NA	False	NA	NA	NA	22480268	22533657	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_22480383_22480853_22480942_22481030_22481133_22481751_22481893_22482443_22482644_22483030_22483228_22483395_22483561_22484661_22484817_22485829_22485973_22486120_22486323_22489205_22489316_22490294_22490443_22490816_22490977_22491706_22491826_22513519_22513601_22513763_22513922_22523819_22523949_22527565_22527666_22527777_22527974_22532059_22532121_22532229_22532266_22533625
H1_mix_00034761	chr16	+	526	4	FSM	ENSG00000243716.11	ENST00000546168.5	685	4	0	159	0	136	multi-exon	FALSE	canonical	3	39	junction_2	39.7324384686702	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCACACATCTCATAGCCG	8661	False	NA	NA	False	NA	NA	NA	22490864	22513978	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_22490977_22491706_22491827_22513521_22513601_22513763
H1_mix_00034764	chr16	+	1622	3	NIC	ENSG00000122254.7	novel	2266	4	NA	NA	490	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_2	1.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGGCTTTTCTCTGTAA	437	False	NA	37	True	AATAAA	-23	NA	22814986	22916338	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_22815096_22854663_22854782_22914943
H1_mix_00034765	chr16	+	1217	1	FSM	ENSG00000260751.2	ENST00000568262.2	1024	1	210	-403	210	403	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTTTCTCCAACTGTGGT	NA	False	NA	NA	False	NA	NA	NA	23568882	23570099	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_23568900_23570100
H1_mix_00034768	chr16	+	490	1	FSM	ENSG00000279202.1	ENST00000624179.1	1733	1	571	672	571	-672	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGCTGCATGTGGTACT	NA	False	NA	NA	False	NA	NA	NA	24098809	24099299	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_24098800_24099300
H1_mix_00034769	chr16	+	7700	22	NIC	ENSG00000090905.19	novel	8303	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	13	junction_4	80.6394793112081	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAGTGGTTTGGATCTT	-20	True	NA	26	True	AATAAA	-19	NA	24729694	24826221	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_24729847_24730252_24730301_24750725_24750814_24758338_24758361_24789231_24791818_24794543_24794720_24795906_24795940_24797489_24797571_24797914_24797967_24804176_24804320_24805013_24805152_24805604_24805734_24806205_24806284_24806573_24806785_24809349_24809482_24815146_24815306_24816815_24816957_24818592_24818701_24820138_24820361_24822076_24822148_24822873_24823014_24823431
H1_mix_00034770	chr16	+	5307	19	ISM	ENSG00000090905.19	ENST00000315183.11	8303	24	61797	0	5	0	3prime_fragment	FALSE	canonical	3	31	junction_2	91.1934587214469	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAGTGGTTTGGATCTT	NA	False	NA	26	True	AATAAA	-19	NA	24791491	24826221	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_24791818_24793472_24793650_24794543_24794720_24795906_24795940_24797489_24797571_24797914_24797967_24804176_24804320_24805013_24805152_24805604_24805734_24806205_24806284_24806573_24806785_24809349_24809482_24815146_24815306_24816815_24816957_24818592_24818701_24820138_24820361_24822076_24822148_24822873_24823014_24823431
H1_mix_00034773	chr16	+	2928	1	FSM	ENSG00000274925.1	ENST00000612792.1	3115	1	179	8	179	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCAAAGCTTGTCTTTTG	537	False	NA	9	True	AATAAA	-14	NA	25258130	25261058	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_25258100_25261100
H1_mix_00034774	chr16	+	489	4	FSM	ENSG00000077238.14	ENST00000566117.5	529	4	40	0	40	0	multi-exon	FALSE	canonical	0	0	junction_1	53.7649204097492	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCAGGGCGGAGTGCGG	-13	True	NA	NA	False	NA	NA	NA	27313707	27345020	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_27313818_27340185_27340274_27342120_27342260_27344868
H1_mix_00034777	chr16	+	2926	9	FSM	ENSG00000103522.16	ENST00000395754.4	2953	9	27	0	27	0	multi-exon	TRUE	canonical	0	0	junction_3	1.72753437013566	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGAGGTCAAGTTGTTTGT	-9	True	NA	16	True	AATAAA	-33	NA	27427270	27450485	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_27427362_27430055_27430121_27434346_27434450_27437487_27437688_27442961_27443117_27444541_27444720_27445176_27445277_27446006_27446089_27448533
H1_mix_00034781	chr16	+	3913	24	NIC	ENSG00000168488.19	novel	3981	24	NA	NA	3	-2	combination_of_known_splicesites	FALSE	canonical	3	61	junction_20	200.379366101324	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTAACCTGCCTGGAGTT	33	True	NA	17	True	AATAAA	-24	NA	28823097	28837230	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_28823559_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835545_28835759_28835932_28836123_28836325_28836486_28836727
H1_mix_00034782	chr16	+	3722	23	NIC	ENSG00000168488.19	novel	3264	15	NA	NA	22	-2	intron_retention	FALSE	canonical	3	187	junction_1	150.959958568188	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTAACCTGCCTGGAGTT	-3	True	NA	17	True	AATAAA	-24	NA	28824472	28837230	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_28824543_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836486_28836727
H1_mix_00034783	chr16	+	3501	24	NIC	ENSG00000168488.19	novel	3264	15	NA	NA	40	-2	combination_of_known_splicesites	FALSE	canonical	3	140	junction_22	179.54579324355	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTAACCTGCCTGGAGTT	15	True	NA	17	True	AATAAA	-24	NA	28824490	28837230	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_28824543_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836123_28836325_28836486_28836727
H1_mix_00034788	chr16	+	4626	10	NNC	ENSG00000178188.15	novel	2529	10	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	35.8422469533743	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTATCGTGATGGCTATG	-10	True	NA	17	True	AATAAA	-18	NA	28863833	28874201	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_28865625_28866011_28867034_28867330_28867433_28869005_28869098_28869207_28869384_28871779_28871984_28872189_28872402_28872533_28872706_28873169_28873270_28873446
H1_mix_00034791	chr16	+	2189	12	ISM	ENSG00000169682.18	ENST00000565975.5	1979	13	29	8	0	0	intron_retention	FALSE	canonical	3	173	junction_1	148.230388024468	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCCAGGTGCCTGCTCT	19	False	NA	10	True	AATAAA	-11	NA	28974800	28984540	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_28974864_28975100_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404_28979472_28981469_28981616_28981900_28982057_28982355_28982546_28982856_28982923_28983191_28983291_28983785
H1_mix_00034792	chr16	+	3627	23	NNC	ENSG00000261067.7	novel	5296	19	NA	NA	-3	-321	intron_retention	TRUE	canonical	1	6	junction_11	311.196175936266	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGTGCGTCTGTGTGTGCC	19	False	NA	12	True	AATAAA	-22	NA	28974800	28990454	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_+_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404_28979472_28981469_28981616_28981900_28982057_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984608_28985518_28985712_28985741_28985853_28985889_28986134_28986217_28986381_28986447_28986539_28986570_28986656_28986715_28986798_28986894_28989526_28989590_28989773_28989840_28989932_28990020_28990188
H1_mix_00034798	chr16	+	2225	10	FSM	ENSG00000260280.5	ENST00000564950.5	2225	10	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_3	331.259884548539	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTGTGTTCATGTAGAG	586	False	NA	8	True	AATAAA	-16	NA	29455156	29464963	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29455886_29457631_29457760_29457927_29458016_29461381_29461534_29461637_29461764_29461852_29461951_29463344_29463472_29463566_29463662_29464159_29464341_29464462
H1_mix_00034799	chr16	+	1006	4	Antisense	novelGene_ENSG00000169203.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	133.407479383862	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTGGAAGGGGAGTGAGCA	NA	False	NA	NA	False	NA	NA	NA	29483664	29485647	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr16_+_29484243_29484368_29484577_29485313_29485509_29485622
H1_mix_00034804	chr16	+	2403	4	FSM	ENSG00000167371.21	ENST00000572820.2	2403	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	30.1367254727886	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGTTGGTTCCTGCGTT	29	True	NA	18	True	AATAAA	-28	NA	29812290	29815892	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29812352_29812989_29813934_29814332_29814466_29814627
H1_mix_00034809	chr16	+	4469	7	FSM	ENSG00000169592.15	ENST00000569957.5	4469	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	104.056741999524	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGAGTGGCTCTGGGTTT	2	True	NA	10	True	AATGAA	-12	NA	29996237	30005774	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_29996392_29996546_29996618_29996807_29996861_30000757_30000837_30000928_30001041_30001211_30004658_30005220
H1_mix_00034810	chr16	+	1464	9	FSM	ENSG00000149925.22	ENST00000395240.7	1447	9	-17	0	0	0	multi-exon	TRUE	canonical	2	289	junction_5	2311.14753693917	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCACACTGCCAAATAAACAG	-2	True	NA	-12	True	NA	NA	NA	30065759	30070380	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30065928_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068991_30069305_30069390_30069498_30069674_30069829_30070030_30070116
H1_mix_00034811	chr16	+	1640	10	FSM	ENSG00000149925.22	ENST00000642816.3	1640	10	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	2977.48801658191	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGCCGTCCGTGTCTTGT	-2	True	NA	22	True	AATAAA	-18	NA	30065759	30070414	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30065928_30066884_30067039_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068979_30069305_30069390_30069498_30069674_30069829_30070030_30070116
H1_mix_00034813	chr16	+	762	5	FSM	ENSG00000132207.18	ENST00000345535.8	762	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	399.835903840563	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGCCTTATGGTGGATGC	11	False	NA	NA	False	AATAAA	-14	NA	30193903	30197561	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_30194273_30194739_30194792_30196973_30197102_30197269_30197358_30197436
H1_mix_00034822	chr16	+	1400	11	NIC	ENSG00000103496.15	novel	1410	11	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	61.2277714766755	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCCCTGTGCACGTGTG	27	True	NA	9	True	ATTAAA	-19	NA	31033589	31040164	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_31033836_31034012_31034115_31034203_31034326_31034461_31034537_31034969_31035041_31037925_31038035_31038113_31038191_31038509_31038648_31039540_31039652_31039722_31039819_31039911
H1_mix_00034825	chr16	+	1790	14	FSM	ENSG00000089280.19	ENST00000566605.5	1787	14	-3	0	-3	0	multi-exon	FALSE	canonical	3	29	junction_6	665.017942543903	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTGTTCCTCTTCCCC	NA	False	NA	28	True	ATTAAA	-17	NA	31180134	31191602	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31180228_31182397_31182423_31182512_31182665_31183857_31184003_31184208_31184397_31184938_31185180_31188324_31188358_31189122_31189227_31189664_31189795_31190039_31190142_31190274_31190399_31190741_31190843_31190962_31191111_31191398
H1_mix_00034831	chr16	+	495	3	FSM	ENSG00000197302.11	ENST00000542684.5	481	3	-14	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	24	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTTAAAAAAATTAAATGGG	9	True	NA	NA	False	NA	NA	NA	31713272	31759553	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_31713436_31753765_31753901_31759356
H1_mix_00034841	chr16	+	8739	29	FSM	ENSG00000177200.18	ENST00000219084.10	8739	29	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_23	8.4915173760017	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGAAGTTTAATTATTT	NA	False	NA	25	True	ATTAAA	-27	NA	53235136	53327451	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_53235307_53238342_53238587_53242839_53243017_53245335_53245480_53245594_53245851_53247292_53247504_53249870_53250067_53254437_53254606_53255599_53255780_53262986_53263098_53267293_53267491_53267926_53268127_53273625_53273786_53274212_53274303_53285595_53285700_53286225_53286344_53287956_53288015_53291724_53291768_53292832_53293053_53296955_53297159_53303719_53304626_53306236_53306398_53307680_53307906_53308685_53308855_53314376_53314517_53314822_53315045_53318211_53318341_53321525_53321631_53324019
H1_mix_00034854	chr16	+	1800	7	FSM	ENSG00000051108.15	ENST00000379792.6	1782	7	-18	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	123.199927849907	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCCTGTCATCCTAGCAG	-3	True	NA	34	True	AATAAA	-27	NA	56932141	56943886	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_56932392_56935234_56935313_56936686_56936818_56939236_56939360_56939894_56940246_56942131_56942238_56943125
H1_mix_00034862	chr16	+	2195	6	FSM	ENSG00000103005.12	ENST00000539737.6	1212	6	0	-983	0	0	multi-exon	TRUE	canonical	2	11	junction_3	262.670439905217	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTTTTGGACTACTTGT	-24	True	NA	19	True	AATAAA	-21	NA	58001404	58021617	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_58001582_58002478_58002646_58009928_58010113_58017333_58017440_58018971_58019056_58020140
H1_mix_00034871	chr16	+	855	5	FSM	ENSG00000168701.19	ENST00000565201.1	832	5	-23	0	0	0	multi-exon	FALSE	canonical	3	538	junction_4	39.274673773311	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATGGCTGTGTGGGTGA	7	True	NA	25	True	AATAAA	-15	NA	67227144	67229278	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_67227225_67227835_67227932_67228354_67228415_67228494_67228632_67228796
H1_mix_00034885	chr16	+	2799	18	FSM	ENSG00000132600.18	ENST00000687558.1	4058	18	15	1244	0	0	multi-exon	FALSE	canonical	2	7	junction_1	75.1830062518502	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGCTGGGGTTCTGAGTG	2	True	NA	3	True	AATAAA	-8	NA	68311133	68357249	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_68311746_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347210_68347295_68347630_68347679_68348341_68348432_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
H1_mix_00034886	chr16	+	3031	19	NIC	ENSG00000132600.18	novel	4238	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	90.4731219891805	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGCTGGGGTTCTGAGTG	2	True	NA	3	True	AATAAA	-8	NA	68311133	68357249	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_68311746_68312041_68312177_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347210_68347295_68347630_68347679_68348341_68348432_68352247_68352410_68353394_68353567_68355722_68355884_68356700_68356798_68357053
H1_mix_00034887	chr16	+	2108	16	NIC	ENSG00000132600.18	novel	2996	17	NA	NA	22	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_9	75.9898823674719	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAGTGGCTCATGGCT	4770	False	NA	13	True	AATAAA	-18	NA	68315901	68357259	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347630_68347679_68348341_68348432_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
H1_mix_00034911	chr16	+	3250	4	FSM	ENSG00000184517.12	ENST00000393430.6	3250	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	25.7725090401036	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTCTTTGTATATGAT	62	False	NA	11	True	AATAAA	-17	NA	75148581	75172236	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_75148663_75152908_75152967_75166769_75166897_75169252
H1_mix_00034917	chr16	+	555	5	NIC	ENSG00000186153.18	novel	710	6	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	47.2619032625644	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACATCTTCTTTTGTGGGT	-29	True	NA	NA	False	AATAAA	-23	NA	78099656	78278698	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_78099886_78108422_78108488_78109777_78109836_78164182_78164290_78278602
H1_mix_00034940	chr16	+	1924	15	FSM	ENSG00000174177.13	ENST00000567949.5	1905	15	-19	0	0	0	multi-exon	TRUE	canonical	1	1	junction_5	48.9750040368366	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTACAGTACACGTGGGGG	4	True	NA	6	True	AATAAA	-24	NA	88706502	88715386	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_88706599_88707135_88707211_88709937_88710017_88710222_88710283_88711634_88711696_88712060_88712384_88712621_88712906_88713311_88713448_88713646_88713779_88714135_88714228_88714382_88714487_88714586_88714738_88714859_88714927_88715047_88715107_88715181
H1_mix_00034941	chr16	+	815	5	FSM	ENSG00000167515.10	ENST00000568583.5	801	5	-14	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	498.650365988034	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGGCTGAACAGGTGGG	-6	True	NA	NA	False	NA	NA	NA	88857126	88861309	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_+_88857184_88858618_88858792_88859662_88859751_88859892_88859973_88860892
H1_mix_00034950	chr16	+	3322	14	ISM	ENSG00000178773.15	ENST00000319518.13	2442	15	0	0	0	0	intron_retention	TRUE	canonical	3	24	junction_9	14.0375658302239	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTTGTGCCTTCAGTC	4	True	NA	20	True	AATAAA	-20	NA	89575757	89597246	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_89576072_89577538_89577722_89583696_89583772_89584027_89584103_89584773_89584858_89585463_89585554_89585686_89585786_89586669_89586757_89587042_89587103_89588674_89588809_89589896_89589952_89591006_89591059_89591126_89591261_89595366
H1_mix_00034951	chr16	+	661	2	ISM	ENSG00000178773.15	ENST00000525982.5	576	4	-12	5817	2	-5817	5prime_fragment	FALSE	canonical	3	86	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGTAATACATTCGTATG	16	True	NA	NA	False	ATTAAA	-20	NA	89575769	89577897	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_89576072_89577538
H1_mix_00034953	chr16	+	1826	13	NIC	ENSG00000185324.22	novel	819	11	NA	NA	4	-110	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	119.524056156073	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTCCATCCGTGGCTGCA	269	False	NA	NA	False	GGGGCT	-34	NA	89686954	89695928	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_+_89687549_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693327_89693397_89693468_89694172_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695594
H1_mix_00034962	chr16	+	3689	5	ISM	ENSG00000223959.9	ENST00000685584.1	2913	10	14819	58	-1061	-52	3prime_fragment	FALSE	canonical	3	26	junction_1	9	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAATGGGTGGATTTTAT	NA	False	NA	0	True	ATTAAA	-19	NA	89987434	89996558	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_+_89988952_89990865_89991004_89992720_89992829_89993767_89993894_89994758
H1_mix_00034966	chr16	-	2035	5	NNC	ENSG00000234769.7	novel	1246	9	NA	NA	685	300	intron_retention	FALSE	canonical	3	36	junction_1	85.6165141780486	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGTGCTTTTAATAAAGG	NA	False	NA	NA	False	AATAAA	-19	NA	17383	14080	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_14721_15480_16449_16540_16739_16915_17052_17290
H1_mix_00034968	chr16	-	2689	3	FSM	ENSG00000103148.17	ENST00000610509.1	2917	3	228	0	228	0	multi-exon	FALSE	canonical	3	26	junction_1	68	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTAAGTTCCCGTCCAT	9601	False	NA	-17	True	GATAAA	-17	NA	90858	84270	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_84596_86667_86871_88697
H1_mix_00034969	chr16	-	2276	14	NIC	ENSG00000103148.17	novel	3128	14	NA	NA	41	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	45.8887257169884	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTAAGTTCCCGTCCAT	226	False	NA	-17	True	GATAAA	-17	NA	138471	84270	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_84596_86667_86871_88697_88891_89712_89903_92595_92726_93218_93326_98144_98302_100371_100510_110524_110607_112621_112776_117300_117376_119125_119256_130521_130592_138149
H1_mix_00034970	chr16	-	2042	11	NIC	ENSG00000103148.17	novel	2784	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_10	53.4187233093416	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTAAGTTCCCGTCCAT	185	False	NA	-17	True	GATAAA	-17	NA	138512	84270	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_84596_86667_86871_88697_88891_89712_89903_92595_92726_93218_93326_98144_98302_100371_100510_110524_110607_112621_112776_138149
H1_mix_00034972	chr16	-	483	1	FSM	ENSG00000268836.1	ENST00000595428.1	547	1	57	7	57	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGACAAATAGTTGTTTTTT	NA	False	NA	-9	True	CATAAA	-11	NA	186237	185754	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_185800_186200
H1_mix_00034974	chr16	-	2134	8	FSM	ENSG00000007392.17	ENST00000464711.5	2134	8	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_7	166.633779068143	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTATTGTTTTGGAGCTA	NA	False	NA	-20	True	AATACA	-23	NA	209773	189097	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_189340_189967_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_208600
H1_mix_00034975	chr16	-	1281	9	NIC	ENSG00000007392.17	novel	1434	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	52	junction_2	165.189616426094	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTATTGTTTTGGAGCTA	-3	True	NA	-20	True	AATACA	-23	NA	229434	189097	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_189340_189967_190136_192926_193016_199061_199239_206003_206148_208077_208189_220648_220748_227241_227337_229278
H1_mix_00034976	chr16	-	2562	4	ISM	ENSG00000007392.17	ENST00000419516.5	1211	10	-15	16108	0	0	intron_retention	FALSE	canonical	3	459	junction_2	48.5546656414763	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGTGAGATAAGTGCCTT	-18	True	NA	32	True	AAAAAG	-27	NA	229449	206003	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_206148_208077_208189_220648_220748_227241
H1_mix_00034977	chr16	-	2239	4	FSM	ENSG00000086504.18	ENST00000481453.5	2229	4	0	-10	0	0	multi-exon	FALSE	canonical	3	320	junction_3	586.699430903271	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGCTTTGAGGACTGGT	8	True	NA	-11	True	AGTAAA	-26	NA	370526	367383	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_367783_368327_368415_368500_370226_370498
H1_mix_00034981	chr16	-	1464	1	Intergenic	novelGene_496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATGGTCTTCACAAAAAT	15	True	NA	NA	False	AATAAA	-15	NA	589237	587773	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_-_587800_589200
H1_mix_00034982	chr16	-	2147	4	NNC	ENSG00000127585.12	novel	2257	4	NA	NA	-53	-2	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	17.9691092959247	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTCTGAGTTGTTTTT	-16	True	NA	-2	True	ATTAAA	-14	NA	695316	692501	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_694424_694633_694698_694991_695077_695240
H1_mix_00034984	chr16	-	4320	6	FSM	ENSG00000059145.19	ENST00000248104.11	4320	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	31.7767210391507	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTCTGCTTCTCTGAG	4	True	NA	-17	True	ATTAAA	-14	NA	1379683	1363204	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1366396_1367091_1367350_1367655_1367859_1369933_1370358_1371518_1371612_1379532
H1_mix_00034985	chr16	-	1023	2	NNC	ENSG00000174109.5	novel	917	2	NA	NA	0	50697	intron_retention	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATACTTTGGGCCAACATA	-10	True	NA	NA	False	NA	NA	NA	1420747	1369054	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_1369082_1419751
H1_mix_00034986	chr16	-	1409	6	FSM	ENSG00000059145.19	ENST00000301712.5	1431	6	23	-1	23	1	multi-exon	FALSE	canonical	0	0	junction_1	8.5463442476886	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGTAGAGGATTTTGTT	6009	False	NA	NA	False	AATAAA	-18	NA	1414728	1398303	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1398942_1399373_1399510_1401567_1401702_1403167_1403345_1413845_1414056_1414614
H1_mix_00034987	chr16	-	643	3	FSM	ENSG00000187535.14	ENST00000569646.5	643	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	100	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAGGGTGAGTCAACACG	4	True	NA	NA	False	NA	NA	NA	1610666	1602376	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1602592_1607119_1607298_1610416
H1_mix_00034988	chr16	-	1291	9	FSM	ENSG00000063854.13	ENST00000566709.5	1291	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	101.294666073787	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGTATTTATTCCCATA	12	False	NA	-26	True	NA	NA	NA	1827157	1809123	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1809447_1809753_1809834_1816892_1816995_1817167_1817272_1819114_1819224_1819896_1820015_1822299_1822365_1822864_1823038_1826940
H1_mix_00034989	chr16	-	373	3	FSM	ENSG00000198736.13	ENST00000473663.1	373	3	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	144	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGACTCATTTGCTGA	9795	False	NA	-7	True	NA	NA	NA	1943123	1938941	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_1939144_1941256_1941406_1943101
H1_mix_00034991	chr16	-	730	5	FSM	ENSG00000065057.9	ENST00000651522.1	733	5	0	3	0	0	multi-exon	FALSE	canonical	3	29	junction_2	261.629986813439	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGGATCTGGCTGATGT	1640	False	NA	-8	True	AATAAA	-17	NA	2046190	2039820	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2040048_2040132_2040242_2043566_2043727_2044629_2044801_2046127
H1_mix_00034992	chr16	-	4472	24	NNC	ENSG00000008710.20	novel	14140	46	NA	NA	0	-370	intron_retention	FALSE	non_canonical	0	0	junction_19	19.7960298477136	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGCAGGAGCAGCCGGGCG	NA	False	NA	NA	False	NA	NA	NA	2103789	2089896	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_2090195_2090284_2090591_2090673_2090809_2090883_2091175_2091422_2091598_2091780_2091907_2092046_2092189_2092479_2092593_2092953_2093094_2093543_2093739_2093810_2094014_2094091_2094211_2097147_2097242_2097318_2097504_2097727_2097781_2097867_2097985_2099643_2099771_2099860_2100072_2100165_2100312_2100400_2100567_2102060_2102257_2102380_2102634_2102813_2102971_2103265
H1_mix_00034993	chr16	-	3335	15	FSM	ENSG00000008710.20	ENST00000496574.6	4419	15	1068	16	-540	-9	multi-exon	FALSE	canonical	0	0	junction_11	28.8907159722246	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGACTCTACTGGGGGT	NA	False	NA	NA	False	NA	NA	NA	2106948	2097867	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2097985_2099643_2099771_2099860_2100072_2100165_2100310_2100395_2100567_2102060_2102257_2102380_2102634_2102813_2102971_2103265_2103896_2104497_2104643_2105321_2105708_2105864_2106025_2106090_2106305_2106397_2106678_2106804
H1_mix_00034995	chr16	-	369	3	FSM	ENSG00000167971.16	ENST00000562055.1	435	3	0	66	0	-66	multi-exon	FALSE	canonical	1	2	junction_2	3.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGGCACCAGCTTCTGGC	7256	False	NA	NA	False	NA	NA	NA	2189496	2188962	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2189158_2189237_2189334_2189418
H1_mix_00034996	chr16	-	2361	3	NNC	ENSG00000184207.9	novel	3164	2	NA	NA	0	-314	intron_retention	FALSE	canonical	3	21	junction_1	761.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGTTCCAACTCCAGAGC	-28	True	NA	85	True	NA	NA	NA	2214840	2211906	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_2213092_2213580_2214054_2214137
H1_mix_00034997	chr16	-	1041	8	NNC	ENSG00000167969.13	novel	1507	7	NA	NA	0	20556	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	379.701708917806	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCGGGCGCGGTGGCTCA	-3	True	NA	NA	False	AAAAAG	-1	NA	2251587	2218845	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_2218873_2239894_2240146_2243045_2243225_2243317_2243440_2244405_2244553_2246858_2246987_2251315_2251430_2251514
H1_mix_00034998	chr16	-	1723	7	NNC	ENSG00000205937.12	novel	2069	8	NA	NA	0	34270	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1134.38470840657	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCGGGCGCGGTGGCTCA	4515	False	NA	NA	False	AAAAAG	-1	NA	2264331	2218845	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_2218874_2253115_2254064_2255584_2255727_2262277_2262432_2262739_2262843_2263095_2263288_2264175
H1_mix_00034999	chr16	-	1971	9	NNC	ENSG00000205937.12	novel	1276	9	NA	NA	0	34270	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1099.05900091851	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCGGGCGCGGTGGCTCA	14	True	NA	NA	False	AAAAAG	-1	NA	2268114	2218845	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_2218874_2253115_2254064_2255584_2255727_2262277_2262432_2262739_2262843_2263095_2263288_2264175_2264332_2264572_2264761_2268054
H1_mix_00035001	chr16	-	397	1	FSM	ENSG00000260095.1	ENST00000561653.1	397	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATCAAAGGAAGTGTAGTT	NA	False	NA	-5	True	AATAAA	-17	NA	2452977	2452580	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2452600_2453000
H1_mix_00035002	chr16	-	1854	3	FSM	ENSG00000172382.10	ENST00000543965.5	2067	3	212	1	212	-1	multi-exon	FALSE	canonical	3	13	junction_1	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCACGTGGGGATCCTTG	4871	False	NA	-4	True	AATAAA	-21	NA	2715353	2712419	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_2712815_2713528_2713699_2714064
H1_mix_00035004	chr16	-	1378	1	Genic_Genomic	ENSG00000172382.10	novel	NA	NA	NA	NA	-912	-5140	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCAGTCCCCCACCAGGCT	NA	False	NA	NA	False	NA	NA	NA	2721463	2720085	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr16_-_2720100_2721500
H1_mix_00035005	chr16	-	1439	3	NNC	ENSG00000184697.7	novel	1739	3	NA	NA	2078	61348	intron_retention	FALSE	non_canonical	0	0	junction_1	0	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAAATTAGCCGGGGGTG	8179	False	NA	NA	False	TATAAA	-31	NA	3016092	2953363	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_2953397_2999479_2999505_3014711
H1_mix_00035006	chr16	-	1423	4	NNC	ENSG00000184697.7	novel	1366	2	NA	NA	0	61348	intron_retention	FALSE	non_canonical	0	0	junction_1	1911.54533180763	1094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAAATTAGCCGGGGGTG	0	True	NA	NA	False	TATAAA	-31	NA	3018183	2953363	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_2953396_2999479_2999505_3014711_3016043_3018148
H1_mix_00035008	chr16	-	3617	4	NIC	ENSG00000140987.21	novel	3108	7	NA	NA	4	0	intron_retention	FALSE	canonical	3	11	junction_1	22.5141930543577	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGGCCTTTGGTTGT	6	True	NA	-4	True	AATAAA	-17	NA	3400985	3382084	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_3384942_3393648_3393815_3397191_3397745_3400944
H1_mix_00035009	chr16	-	7345	15	NNC	ENSG00000188827.11	novel	7315	15	NA	NA	-1078	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	7.16745763709782	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTGCCACACTCCAGG	1260	False	NA	-12	True	AATAAA	-21	NA	3610337	3581180	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_3582694_3583096_3583511_3584768_3584872_3589001_3591311_3592698_3592866_3594452_3594600_3595604_3595694_3596152_3596394_3597378_3597696_3597796_3598000_3600978_3601192_3602117_3602308_3606473_3606699_3608429_3609567_3610260
H1_mix_00035010	chr16	-	2054	17	FSM	ENSG00000126602.11	ENST00000538171.5	2052	17	0	-2	0	1	multi-exon	FALSE	canonical	3	14	junction_16	426.78857104543	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTGGGCTTTTTTTC	14	True	NA	-4	True	TTTAAA	-19	NA	3717513	3658035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_3658231_3658792_3658866_3661986_3662133_3662881_3662968_3663423_3663563_3664273_3664460_3665970_3666119_3671721_3671792_3672699_3672821_3674338_3674495_3675323_3675398_3676035_3676146_3677497_3677659_3679718_3679791_3685995_3686137_3689054_3689138_3717420
H1_mix_00035012	chr16	-	8330	24	NNC	ENSG00000005339.15	novel	10790	31	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_18	21.7831727775613	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGTTCAGATTGGCTAAT	NA	False	NA	0	True	AATAAA	-27	NA	3780867	3725053	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_3729875_3731191_3731474_3731775_3731938_3736035_3736204_3736649_3736816_3738558_3738673_3739577_3739725_3740398_3740550_3744893_3744962_3745276_3745355_3749626_3749684_3751725_3751837_3757287_3757377_3757808_3758049_3758853_3758973_3767719_3767910_3769173_3769354_3770569_3770981_3773750_3773931_3774568_3774694_3777612_3777658_3778010_3778183_3778699_3778818_3780731
H1_mix_00035013	chr16	-	7951	12	NNC	ENSG00000162104.10	novel	7980	11	NA	NA	9	2	at_least_one_novel_splicesite	TRUE	non_canonical	3	19	junction_1	11.5922459122146	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGATGCCTGGTGTTTTCT	3	True	NA	NA	False	ATTAAA	-20	NA	4116433	3962650	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_3963098_3963119_3966967_3974668_3974711_3977481_3977631_3979115_3979276_3983231_3983441_3988993_3989097_3992145_3992364_3993405_3993511_4007367_4007559_4113749_4115486_4115689
H1_mix_00035014	chr16	-	1469	3	FSM	ENSG00000262468.7	ENST00000571970.6	1469	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGCCGCTTCTGGGGAC	8685	False	NA	-7	True	AATAAA	-20	NA	4251864	4246007	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4246861_4246988_4247062_4251321
H1_mix_00035015	chr16	-	1223	2	FSM	ENSG00000262468.7	ENST00000650502.1	1243	2	20	0	-4	0	multi-exon	FALSE	canonical	1	1	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACGCCTGGCTAATTTTT	1	True	NA	NA	False	NA	NA	NA	4253794	4251728	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4252035_4252877
H1_mix_00035016	chr16	-	1613	1	FSM	ENSG00000090447.12	ENST00000575672.1	1613	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGAGTCTCCTGGGTG	1751	False	NA	-5	True	AATAAA	-20	NA	4258798	4257185	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_4257200_4258800
H1_mix_00035017	chr16	-	2605	24	NNC	ENSG00000262246.6	novel	1737	17	NA	NA	1	-15	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	28.3170011121389	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTTATCACTTCTAATT	6	True	NA	-17	True	AATAAA	-4	NA	4416578	4358864	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_4359070_4359295_4359386_4359479_4359622_4360277_4360364_4360443_4360549_4360942_4361086_4361161_4361249_4361360_4361470_4361984_4362161_4362611_4362739_4364275_4364414_4364596_4364690_4364774_4364921_4365002_4365061_4365490_4365546_4387985_4388069_4388544_4388632_4395288_4395340_4405490_4405568_4407500_4407685_4408180_4408252_4412355_4412431_4413307_4413405_4416458
H1_mix_00035018	chr16	-	2341	16	NIC	ENSG00000168096.15	novel	1946	16	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	2	4	junction_15	50.7700699231348	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGAAGGGCTCAGTTCTG	25	True	NA	-11	True	AATAAA	-14	NA	4734226	4696512	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_4696897_4697016_4697105_4697332_4697417_4697976_4698063_4698426_4698600_4698799_4698942_4699051_4699177_4700969_4701135_4701433_4701544_4702101_4702243_4705094_4705254_4714050_4714187_4724749_4724832_4726658_4726855_4726978_4727178_4734155
H1_mix_00035019	chr16	-	3405	12	ISM	ENSG00000140632.17	ENST00000321919.14	3718	16	15068	-5	1	5	3prime_fragment	FALSE	canonical	3	527	junction_6	87.6630476161728	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGCAGGAGTCCTGCTTCC	NA	False	NA	-2	True	AATAAA	-24	NA	4832220	4803197	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_4805311_4811169_4811295_4811622_4811803_4812085_4812249_4813736_4813839_4814536_4814648_4817597_4817698_4821379_4821454_4821546_4821598_4822874_4822932_4823820_4823908_4831978
H1_mix_00035022	chr16	-	1994	10	NIC	ENSG00000103174.13	novel	2260	11	NA	NA	36	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	24.576411454889	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGACTTAGGTCACTGC	28	True	NA	2	True	AATAAA	-45	NA	5033592	5024843	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_5025686_5027134_5027199_5027277_5027380_5027845_5027894_5027979_5028186_5028296_5028399_5028879_5029009_5030384_5030494_5031744_5031885_5033340
H1_mix_00035023	chr16	-	945	4	FSM	ENSG00000232258.7	ENST00000620492.5	1618	4	673	0	0	0	multi-exon	TRUE	canonical	1	3	junction_1	2.16024689946929	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGAGCTTTACAGATTGC	673	False	NA	0	True	AATAAA	-19	NA	8589838	8569499	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_8570006_8572086_8572225_8589212_8589294_8589618
H1_mix_00035024	chr16	-	4559	4	FSM	ENSG00000153048.11	ENST00000396593.6	3026	4	-311	-1222	7	1222	multi-exon	FALSE	canonical	3	23	junction_3	1290.52159997421	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTCCCAAGGGAGGCAG	-5	True	NA	NA	False	NA	NA	NA	8868712	8851719	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_8855327_8858349_8858473_8859170_8859336_8868048
H1_mix_00035025	chr16	-	2834	5	FSM	ENSG00000153048.11	ENST00000611932.4	2833	5	0	-1	0	0	multi-exon	FALSE	canonical	3	6	junction_4	1351.04163518376	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGTGTTTGTGTGGAGG	-4	True	NA	-27	True	AATAAA	-22	NA	8869012	8852941	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_8855327_8858349_8858473_8859170_8859336_8860104_8860219_8868965
H1_mix_00035026	chr16	-	729	4	FSM	ENSG00000153048.11	ENST00000561530.5	729	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1301.31634210219	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGAGAGGTGCCCACT	-6	True	NA	-27	True	ATTAAA	-8	NA	8868361	8854920	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_8855327_8858349_8858473_8859170_8859336_8868326
H1_mix_00035027	chr16	-	818	3	NNC	ENSG00000260362.1	novel	660	2	NA	NA	-76	0	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_2	29	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGATGCATTGCCTTTTG	NA	False	NA	NA	False	AATAAA	-22	NA	9676919	9666884	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_9667360_9674300_9674398_9676673
H1_mix_00035029	chr16	-	5854	1	FSM	ENSG00000182108.11	ENST00000570440.2	5854	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCTCTGTTATGAAGTA	4	True	NA	NA	False	ATTAAA	-17	NA	10942460	10936606	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_10936600_10942500
H1_mix_00035030	chr16	-	833	6	FSM	ENSG00000188897.9	ENST00000612858.1	1046	6	106	107	106	-107	multi-exon	FALSE	canonical	1	2	junction_1	4.02988833592198	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGGCCAGGATGGGGC	NA	False	NA	NA	False	NA	NA	NA	11402158	11396510	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11396676_11398347_11398510_11399471_11399601_11399701_11399816_11401265_11401407_11402036
H1_mix_00035031	chr16	-	2618	5	FSM	ENSG00000189067.14	ENST00000413364.6	2292	5	-326	0	13	0	multi-exon	FALSE	canonical	1	6	junction_1	462.719407416633	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATTTATGAGTTCTTTT	191	False	NA	-51	True	AATAAA	-20	NA	11587276	11547998	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11549746_11551706_11551805_11553532_11553690_11556510_11556736_11586885
H1_mix_00035032	chr16	-	543	4	FSM	ENSG00000189067.14	ENST00000576334.1	556	4	13	0	13	0	multi-exon	FALSE	canonical	1	4	junction_3	4.24264068711928	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGACCTTACCAGGCGGC	5	True	NA	NA	False	NA	NA	NA	11636364	11556721	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_11556736_11633532_11633638_11635824_11635954_11636069
H1_mix_00035039	chr16	-	579	1	FSM	ENSG00000242307.1	ENST00000463867.1	348	1	-251	20	-251	-20	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTACCAAAGGTGATGTAG	NA	False	NA	NA	False	NA	NA	NA	13922930	13922351	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_13922400_13922900
H1_mix_00035040	chr16	-	622	3	Antisense	novelGene_ENSG00000201075.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	9	junction_1	11.5	40	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTCTGGGAATGTTTT	6	True	NA	-12	True	AATAAA	-14	NA	14283966	14224783	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr16_-_14225185_14255987_14256104_14283861
H1_mix_00035041	chr16	-	2398	6	FSM	ENSG00000157045.9	ENST00000566542.5	2398	6	0	0	0	0	multi-exon	FALSE	canonical	3	720	junction_4	66.5624518779169	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTGAGACTTATTTTT	9959	False	NA	-1	True	AATAAA	-20	NA	15046054	15037853	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_15038211_15038573_15038688_15039968_15040067_15041067_15041122_15041622_15041677_15044333
H1_mix_00035042	chr16	-	4827	16	NIC	ENSG00000270580.5	novel	2902	18	NA	NA	-109	411	intron_retention	FALSE	canonical	3	63	junction_15	70.3178181939368	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCAGTCCTTATGTTAT	NA	False	NA	-18	True	AATAAA	-25	NA	15131710	15104311	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_15104759_15106114_15106151_15106259_15106321_15107329_15107438_15110413_15110559_15110721_15110822_15114442_15114572_15118925_15119055_15125690_15127597_15127686_15127898_15127991_15128136_15128221_15128390_15129881_15130078_15130201_15130455_15130634_15130792_15131073
H1_mix_00035043	chr16	-	3152	17	NIC	ENSG00000270580.5	novel	2902	18	NA	NA	-109	411	combination_of_known_splicesites	FALSE	canonical	3	85	junction_16	69.5527845866001	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCAGTCCTTATGTTAT	NA	False	NA	-18	True	AATAAA	-25	NA	15131710	15104311	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_15104759_15106114_15106151_15106259_15106321_15107329_15107438_15110413_15110559_15110721_15110822_15114442_15114572_15118925_15119055_15125690_15125808_15127469_15127597_15127686_15127898_15127991_15128136_15128221_15128390_15129881_15130078_15130201_15130455_15130634_15130792_15131086
H1_mix_00035044	chr16	-	1988	7	ISM	ENSG00000188599.17	ENST00000534799.6	1214	9	1833	1538	-855	-1520	internal_fragment	FALSE	canonical	3	227	junction_4	31.543620591175	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAGAGTGAATGTAACTT	NA	False	NA	NA	False	NA	NA	NA	15120069	15105849	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_15106151_15106259_15106321_15107329_15107438_15110413_15110559_15110721_15110822_15114442_15114572_15118925
H1_mix_00035045	chr16	-	3809	12	NNC	ENSG00000250251.6	novel	4769	24	NA	NA	-216	0	intron_retention	FALSE	canonical	3	47	junction_1	72.3532427437581	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGATGGCCCCACATGCTC	-2	True	NA	NA	False	NA	NA	NA	15154780	15132719	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_15133062_15133263_15133424_15133489_15133704_15133794_15134075_15134201_15134346_15135279_15135430_15135648_15136751_15136868_15137541_15137753_15137924_15138191_15138264_15138384_15138457_15154349
H1_mix_00035046	chr16	-	745	7	ISM	ENSG00000183793.14	ENST00000360151.9	1084	8	4447	280	4447	-280	3prime_fragment	FALSE	canonical	3	86	junction_1	86.2427130577161	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGCTCTATCCCCTTCC	4483	False	NA	NA	False	NA	NA	NA	15373847	15363907	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_15364070_15365428_15365465_15365573_15365635_15366652_15366761_15369711_15369857_15370019_15370120_15373714
H1_mix_00035047	chr16	-	803	6	ISM	ENSG00000183793.14	ENST00000543801.5	699	8	4447	333	4447	-35	internal_fragment	FALSE	canonical	3	247	junction_5	43.5182720245186	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTTCCATATTTGTAATA	4483	False	NA	NA	False	NA	NA	NA	15373847	15365208	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_15365465_15365573_15365635_15366652_15366761_15369711_15369857_15370019_15370120_15373714
H1_mix_00035048	chr16	-	7332	26	NNC	ENSG00000166783.22	novel	5900	27	NA	NA	0	104	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_19	12.8343289657076	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCCCCTTCTGGAAATAG	24	True	NA	86	True	AATACA	-36	NA	15643108	15594282	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_15596938_15598853_15599025_15600427_15600554_15600640_15600702_15601990_15602204_15604167_15604399_15608290_15608519_15609522_15609726_15610974_15611109_15611591_15611735_15612556_15612778_15615829_15616006_15617051_15617172_15617298_15617536_15620450_15620532_15621732_15621912_15622933_15623097_15624768_15624928_15625015_15625174_15630331_15630505_15631380_15631499_15633616_15633844_15634756_15634932_15635655_15636343_15639089_15639292_15643017
H1_mix_00035049	chr16	-	8043	27	NNC	ENSG00000166783.22	novel	7730	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_14	12.5276026598215	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGTTTCCCAAGTGAG	24	True	NA	-18	True	AATAAA	-20	NA	15643108	15594386	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_15596938_15598853_15599025_15600427_15600554_15600640_15600702_15601990_15602204_15604167_15604399_15608290_15608519_15609522_15609726_15610974_15611109_15611591_15611735_15612556_15612778_15615829_15616006_15617051_15617172_15617298_15617536_15619551_15620532_15621732_15621912_15622933_15623124_15624768_15624928_15625015_15625174_15625371_15625798_15630331_15630505_15631380_15631499_15633616_15633844_15634756_15634932_15636192_15636343_15639089_15639292_15643017
H1_mix_00035050	chr16	-	878	2	FSM	ENSG00000091262.17	ENST00000576204.6	969	2	91	0	91	0	multi-exon	TRUE	canonical	2	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTATCTGGGCAGCCCTGG	4942	False	NA	NA	False	NA	NA	NA	16155685	16154729	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_16154795_16154872
H1_mix_00035051	chr16	-	3675	20	NIC	ENSG00000285628.1	novel	4082	22	NA	NA	645	0	combination_of_known_splicesites	TRUE	canonical	3	27	junction_15	87.7396046671445	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTCCACCCTCAGCGGA	NA	False	NA	NA	False	NA	NA	NA	18343638	18318007	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_18318436_18319794_18319831_18319939_18320001_18321016_18321125_18324090_18324236_18324398_18324499_18328113_18328243_18334850_18334968_18336633_18336761_18336850_18337062_18337155_18337300_18337385_18337557_18339047_18339244_18339367_18339621_18339800_18339958_18340248_18340870_18341621_18341767_18342656_18342810_18343199_18343360_18343425
H1_mix_00035052	chr16	-	2711	16	NNC	ENSG00000233024.7	novel	1495	10	NA	NA	-1599	10	intron_retention	TRUE	canonical	3	13	junction_15	92.6048714821322	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATGTTATTGCTTTGTTT	NA	False	NA	NA	False	AATAAA	-35	NA	18380930	18358075	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_18358589_18359947_18359984_18360092_18360154_18361169_18361278_18364226_18364372_18364534_18364635_18368257_18368387_18374831_18375070_18376735_18376863_18376952_18377164_18377257_18377402_18377487_18377659_18379154_18379351_18379474_18379728_18379907_18380065_18380808
H1_mix_00035055	chr16	-	313	2	ISM	ENSG00000254681.6	ENST00000532415.5	10291	32	19355	7362	1919	824	internal_fragment	FALSE	canonical	3	200	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGATGGCCCCACATGCT	NA	False	NA	NA	False	NA	NA	NA	18382585	18381882	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_18382036_18382425
H1_mix_00035056	chr16	-	523	2	ISM	ENSG00000254681.6	ENST00000545364.5	644	4	782	366	782	293	internal_fragment	FALSE	canonical	3	88	junction_1	0	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGCCTCCATCCCCCTG	NA	False	NA	NA	False	NA	NA	NA	18383722	18383072	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_18383239_18383365
H1_mix_00035057	chr16	-	1848	4	NIC	ENSG00000254681.6	novel	10291	32	NA	NA	-1798	-3586	intron_retention	FALSE	canonical	3	45	junction_3	32.3144274623924	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGTGCTGTCCCCCAATG	9322	False	NA	NA	False	NA	NA	NA	18392717	18389436	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_18389535_18389713_18389846_18390744_18392222_18392576
H1_mix_00035059	chr16	-	1803	6	ISM	ENSG00000254681.6	ENST00000532415.5	10291	32	-125	19397	-125	1054	5prime_fragment	FALSE	canonical	3	60	junction_1	68.9446154532752	335	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTGCAGATGCAGAGG	NA	False	NA	NA	False	NA	NA	NA	18402065	18393917	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_18394253_18394370_18395043_18395254_18395425_18395692_18395765_18395885_18395958_18401583
H1_mix_00035061	chr16	-	670	1	FSM	ENSG00000257527.1	ENST00000552753.1	543	1	-126	-1	-126	1	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGCCCATTCATTTGCA	NA	False	NA	NA	False	AATAAA	-17	NA	18411977	18411307	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18411300_18412000
H1_mix_00035063	chr16	-	1522	9	ISM	ENSG00000185164.15	ENST00000330537.10	4352	31	127459	1	-1340	0	3prime_fragment	FALSE	canonical	3	1343	junction_4	237.017898849433	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATAGATGTATTTCTTGG	NA	False	NA	NA	False	AATAAA	-28	NA	18434752	18417325	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_18417969_18418391_18418485_18424273_18424394_18426629_18426732_18429009_18429121_18430814_18430899_18431806_18431949_18433347_18433476_18434653
H1_mix_00035064	chr16	-	2276	7	NNC	ENSG00000170540.15	novel	2278	6	NA	NA	25	41761	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1413.60548676858	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAACTCAAGTCCTTTTA	28	False	NA	NA	False	NA	NA	NA	18801519	18749907	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_18749934_18791666_18793371_18794598_18794684_18795463_18795582_18797924_18798045_18798700_18798835_18801430
H1_mix_00035065	chr16	-	528	5	NNC	ENSG00000134419.15	novel	2203	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6778.50767130937	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTGCTTCCACTTGGT	-4	True	NA	-36	True	AATAAA	-13	NA	18790334	18782968	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_18783102_18784737_18784824_18788062_18788143_18788980_18789119_18790243
H1_mix_00035067	chr16	-	460	3	FSM	ENSG00000157106.18	ENST00000566328.2	550	3	0	90	0	-90	multi-exon	FALSE	canonical	0	0	junction_1	28	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTGTACCATAATATTCT	NA	False	NA	NA	False	NA	NA	NA	18868218	18866236	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_18866513_18866620_18866776_18868189
H1_mix_00035069	chr16	-	782	2	FSM	ENSG00000066654.14	ENST00000569768.1	635	2	-55	-92	-52	92	multi-exon	FALSE	canonical	3	383	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCAGTTCTGTGTAAATA	NA	False	NA	NA	False	NA	NA	NA	20741870	20738651	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_20739072_20741508
H1_mix_00035071	chr16	-	6102	3	NNC	ENSG00000188215.10	novel	6136	3	NA	NA	-22	17	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_2	40.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACAGTGACTT	-22	True	NA	-7	True	AATAAA	-32	NA	20900380	20854907	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_20860370_20862107_20862644_20900276
H1_mix_00035072	chr16	-	1489	9	NIC	ENSG00000103316.12	novel	1482	10	NA	NA	96	0	combination_of_known_junctions	FALSE	canonical	1	6	junction_8	63.5057822170549	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGCTTCGGTAACTTC	5706	False	NA	-14	True	AATAAA	-19	NA	21284008	21258520	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_21258846_21261253_21261339_21262036_21262159_21267553_21267738_21269789_21269892_21275531_21275595_21277430_21277585_21278081_21278337_21283809
H1_mix_00035073	chr16	-	4831	36	Fusion	ENSG00000258186.2_ENSG00000180747.15_ENSG00000169246.16	novel	4262	29	NA	NA	12	-89	multi-exon	FALSE	canonical	3	15	junction_30	269.758779622969	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGGATTGCCCTACTGGC	457	False	NA	NA	False	NA	NA	NA	21519998	21405261	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr16_-_21405294_21406653_21406690_21406798_21406860_21410933_21411130_21411241_21411342_21414956_21415086_21424978_21425137_21425299_21425379_21447117_21447198_21447927_21448088_21448461_21448610_21449588_21449699_21452581_21452784_21452931_21453075_21454086_21454242_21455342_21455508_21455675_21455873_21456259_21456460_21457010_21457152_21457770_21457873_21457961_21458050_21458520_21458640_21459779_21459936_21460089_21460221_21463702_21463994_21464715_21464818_21467091_21467317_21469746_21469920_21471653_21471752_21472672_21472746_21476598_21476813_21478090_21478147_21479441_21479579_21484371_21484536_21487577_21487617_21519827
H1_mix_00035075	chr16	-	363	2	Intergenic	novelGene_512	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCCACCTACTCTGGAGG	NA	False	NA	NA	False	AATACA	-35	NA	21436341	21434974	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_-_21435278_21436281
H1_mix_00035078	chr16	-	4476	4	NNC	ENSG00000185864.18	novel	846	3	NA	NA	-618	59587	intron_retention	FALSE	non_canonical	0	0	junction_1	501.056439491157	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGGACTGCTAGATGAGAG	NA	False	NA	NA	False	NA	NA	NA	21840496	21774981	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_21775017_21834586_21837745_21839104_21839141_21839249
H1_mix_00035079	chr16	-	4238	10	NNC	ENSG00000185864.18	novel	910	9	NA	NA	0	59587	intron_retention	FALSE	non_canonical	0	0	junction_1	380.271085891936	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGGACTGCTAGATGAGAG	NA	False	NA	NA	False	NA	NA	NA	21857657	21774981	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_21775017_21834586_21837745_21839104_21839141_21839249_21839311_21843385_21843582_21843693_21843794_21847412_21847542_21851769_21852047_21857258_21857417_21857569
H1_mix_00035080	chr16	-	464	5	FSM	ENSG00000185864.18	ENST00000165086.8	464	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	510.542542301814	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGTGTGTGCTCACTCCC	NA	False	NA	NA	False	NA	NA	NA	21843412	21837473	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_21837745_21839104_21839141_21839249_21839311_21839939_21840009_21843385
H1_mix_00035082	chr16	-	1496	1	NIC	ENSG00000185864.18	novel	432	5	NA	NA	1392	-2036	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTGAATCACAGCCTTC	NA	False	NA	NA	False	NA	NA	NA	21842020	21840524	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_21840500_21842000
H1_mix_00035083	chr16	-	3625	1	Genic_Genomic	ENSG00000185864.18	novel	NA	NA	NA	NA	-2300	-7649	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCCTGCCTCAGCCTCC	NA	False	NA	NA	False	NA	NA	NA	21868608	21864983	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr16_-_21865000_21868600
H1_mix_00035084	chr16	-	1491	9	ISM	ENSG00000185710.9	ENST00000523028.5	4131	28	26569	1417	-168	0	internal_fragment	FALSE	canonical	3	43	junction_2	28.3196045170126	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACAAGATCAGAAGTGGC	NA	False	NA	NA	False	TTTAAA	-7	NA	21889455	21880754	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_21880870_21881841_21881952_21884823_21885026_21885173_21885317_21886329_21886485_21887583_21887749_21887916_21888114_21888500_21888701_21889251
H1_mix_00035085	chr16	-	1033	8	NIC	ENSG00000185710.9	novel	4131	28	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_7	33.8682923172958	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTAACAGATGTAAGTGCTT	NA	False	NA	NA	False	NA	NA	NA	21916026	21901551	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_21901715_21903448_21903547_21904467_21904541_21904918_21905045_21908391_21908606_21909883_21909940_21911234_21911372_21915860
H1_mix_00035086	chr16	-	1491	1	FSM	ENSG00000274460.1	ENST00000616774.1	1491	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTCTGGATGTTTTATT	1302	False	NA	NA	False	AATAAA	-26	NA	21951708	21950217	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_21950200_21951700
H1_mix_00035087	chr16	-	583	1	FSM	ENSG00000275445.1	ENST00000612618.1	583	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	324	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCCTGAATTCAATGGAG	6	True	NA	NA	False	AATAAA	-17	NA	22008062	22007479	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_22007500_22008100
H1_mix_00035088	chr16	-	663	2	FSM	ENSG00000261113.1	ENST00000568125.1	669	2	6	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGCTTAATAAAGTAGCTC	9893	False	NA	NA	False	NA	NA	NA	22288732	22286707	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_22287074_22288435
H1_mix_00035089	chr16	-	2463	6	NNC	ENSG00000257122.5	novel	3366	7	NA	NA	686	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	37.8977571895752	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACATATGCCTGGATCTC	428	False	NA	78	True	AATAAA	-32	NA	22437029	22418673	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_22420595_22429795_22429949_22432725_22432835_22434626_22434751_22435681_22435813_22437004
H1_mix_00035091	chr16	-	580	2	Antisense	novelGene_ENSG00000237296.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	13	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22477437	22476446	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr16_-_22476553_22476963
H1_mix_00035092	chr16	-	5627	18	NNC	ENSG00000103365.15	novel	5973	17	NA	NA	0	1325	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	133.244370551769	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGTTTATTTTTCTCTG	9	True	NA	-8	True	AATAAA	-20	NA	23510464	23462216	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_23462321_23463961_23467701_23468885_23468997_23469995_23470166_23474903_23475062_23478367_23478502_23478882_23478912_23479764_23479888_23480644_23480771_23482922_23483005_23486014_23486153_23486709_23486791_23488605_23488710_23491676_23491801_23493359_23493459_23494302_23494379_23495693_23495779_23510320
H1_mix_00035094	chr16	-	627	5	FSM	ENSG00000103356.18	ENST00000564668.5	627	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	97.1660949096957	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGAAGCTGGCCAAGGAC	-15	True	NA	NA	False	NA	NA	NA	23557364	23535319	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_23535361_23544513_23544704_23552148_23552305_23553043_23553124_23557204
H1_mix_00035095	chr16	-	3604	22	NIC	ENSG00000140750.17	novel	3495	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_21	137.727786995427	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAACTTCATAATTCTTG	7	True	NA	-12	True	ATTAAA	-19	NA	25015341	24919394	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_24920261_24927683_24927733_24930783_24931405_24935469_24935640_24939363_24939598_24941986_24942144_24943770_24943863_24947481_24947596_24949403_24949485_24952288_24952371_24952930_24953043_24954602_24954731_24959670_24959753_24959910_24959980_24964196_24964309_24968350_24968428_24968660_24968773_24970506_24970581_24977214_24977320_24978965_24979006_25013862_25013957_25015208
H1_mix_00035096	chr16	-	424	3	FSM	ENSG00000260448.7	ENST00000563176.2	561	3	41	96	41	-96	multi-exon	FALSE	canonical	2	4	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAAAACCAGCCTGAGCAA	66	False	NA	NA	False	NA	NA	NA	25111414	25100571	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_25100686_25103350_25103642_25111395
H1_mix_00035097	chr16	-	260	3	FSM	ENSG00000169189.17	ENST00000562039.1	260	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	39.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGGCAGCATTAGCCATC	8778	False	NA	NA	False	AAAAAG	-10	NA	27233078	27225171	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_27225237_27226719_27226837_27233000
H1_mix_00035098	chr16	-	7041	38	NNC	ENSG00000077235.18	novel	7015	37	NA	NA	0	48100	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	128.488800306629	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACAAAGGACATGAATAGA	-8	True	NA	NA	False	NA	NA	NA	27549913	27411454	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_27411481_27460612_27461563_27462293_27462487_27463540_27463593_27464394_27464837_27465259_27465541_27469290_27469551_27470107_27470396_27471747_27471921_27476450_27476545_27478468_27478532_27481078_27481192_27483043_27483126_27484210_27484354_27485996_27486155_27488226_27488416_27488553_27488636_27489042_27489179_27489601_27489744_27492337_27492516_27492616_27492714_27493198_27493297_27494762_27494909_27495210_27495493_27497636_27497822_27498629_27498734_27501190_27501345_27502858_27502996_27505898_27506117_27506846_27507157_27508539_27508656_27511748_27511902_27528597_27528722_27533290_27533388_27537783_27537928_27538179_27538357_27545313_27545524_27549669
H1_mix_00035099	chr16	-	1141	6	FSM	ENSG00000169181.13	ENST00000380897.7	1173	6	32	0	32	0	multi-exon	FALSE	canonical	0	0	junction_5	1.09544511501033	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTGCGGTGTATGGAGG	19	False	NA	-3	True	AATAAA	-17	NA	27888125	27790893	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_27791468_27807486_27807555_27828788_27828957_27844949_27845062_27884485_27884639_27888059
H1_mix_00035100	chr16	-	7724	24	NIC	ENSG00000169180.12	novel	4537	24	NA	NA	0	0	intron_retention	FALSE	canonical	2	6	junction_17	91.1218258462683	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCTGGCTGGGGAGCTG	-18	True	NA	-8	True	AATAAA	-22	NA	28211965	28097978	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_28098640_28101457_28101689_28101846_28101946_28104545_28104708_28106042_28106215_28106382_28106498_28107521_28107678_28111816_28112007_28112903_28113051_28117317_28117463_28121669_28121763_28125688_28125849_28132333_28132404_28133840_28133934_28135215_28135325_28146093_28146204_28152658_28155976_28156073_28156528_28166507_28166586_28169749_28169910_28175897_28176096_28177219_28177333_28180940_28181032_28211365
H1_mix_00035112	chr16	-	418	3	NNC	ENSG00000260442.6	novel	437	3	NA	NA	8	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	40	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCCCAAAACTCTGGATC	29	True	NA	-26	True	ATTAAA	-1	NA	28879887	28878974	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_28879105_28879488_28879756_28879866
H1_mix_00035119	chr16	-	1727	7	NIC	ENSG00000174943.11	novel	1716	6	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	40.4914257041606	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGCTGGCTCCTGGGGA	0	True	NA	-4	True	AATAAA	-15	NA	29926194	29906338	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_29907109_29910977_29911174_29911814_29911868_29911959_29912050_29923189_29923360_29925538_29925582_29925789
H1_mix_00035122	chr16	-	1127	7	NIC	ENSG00000149929.16	novel	2560	7	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	66.5273544407779	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATTTGGTCCCCCATTC	522	False	NA	-6	True	AATAAA	-22	NA	29995591	29992994	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_29993371_29993458_29993558_29993639_29993809_29994647_29994844_29995102_29995218_29995342_29995464_29995540
H1_mix_00035126	chr16	-	2047	6	NIC	ENSG00000169221.14	novel	3580	9	NA	NA	53	-173	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	64.1454596990309	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCATCCCTTCCCTCACCC	21	True	NA	NA	False	NA	NA	NA	30370441	30358266	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_30358574_30358662_30358818_30359171_30359362_30359537_30359604_30359726_30359842_30369227
H1_mix_00035149	chr16	-	3352	1	FSM	ENSG00000196470.12	ENST00000380006.2	3352	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTACTGTGTCTGCTTTAG	2003	False	NA	-23	True	ATTAAA	-25	NA	48363882	48360530	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_48360500_48363900
H1_mix_00035161	chr16	-	3582	16	FSM	ENSG00000125124.14	ENST00000682948.1	3602	16	20	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	35.7965858086432	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAATCAGAATTGCCCAT	-30	True	NA	28	True	ATTAAA	-45	NA	56520055	56484356	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498569_56499777_56499908_56500853_56501026_56501352_56502457_56502672_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519745
H1_mix_00035165	chr16	-	2369	9	NNC	ENSG00000172775.17	novel	981	7	NA	NA	-787	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	17	junction_7	349.426226119334	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCAGAATCCACCTGTG	3761	False	NA	-26	True	NA	NA	NA	57182577	57154144	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_57154508_57164000_57164066_57167092_57167226_57172249_57172373_57172775_57172875_57173727_57173870_57174619_57174689_57178501_57178853_57181553
H1_mix_00035185	chr16	-	3171	4	FSM	ENSG00000159720.13	ENST00000568620.5	3390	4	227	-8	-113	8	multi-exon	FALSE	canonical	3	559	junction_2	18.0616229121921	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTAGGCCCTGGTACCTC	7152	False	NA	8	True	AATAAA	-34	NA	67441505	67438005	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_67438690_67438792_67438871_67438970_67439148_67439273
H1_mix_00035191	chr16	-	538	3	ISM	ENSG00000205220.12	ENST00000570985.1	591	4	156	0	156	0	intron_retention	FALSE	canonical	3	545	junction_2	36	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATGGCTGTGTCATTCTT	41	True	NA	-4	True	AATAAA	-20	NA	67935639	67934505	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_67934672_67934796_67934949_67935419
H1_mix_00035242	chr16	-	2757	6	NNC	ENSG00000135698.10	novel	1101	5	NA	NA	0	16227	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	272.451830604971	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAATTGTCTGCCTTCTT	7	True	NA	NA	False	NA	NA	NA	82170197	82131570	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_82133254_82148161_82148864_82149308_82149404_82151423_82151515_82164081_82164195_82170124
H1_mix_00035246	chr16	-	4340	23	NNC	ENSG00000140943.18	novel	4377	23	NA	NA	21	-1	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_7	61.1773772533876	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAAGCTTAAAGATACTGT	-1	True	NA	-27	True	AATAAA	-15	NA	84116921	84053774	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_84054646_84056004_84056136_84059301_84059429_84060681_84060814_84063304_84063446_84065689_84065768_84066488_84066610_84067666_84067824_84068338_84068455_84069865_84070039_84070587_84070777_84074596_84074742_84081746_84081909_84084982_84085135_84087357_84087461_84090874_84090943_84091731_84091849_84093187_84093298_84093710_84093822_84095601_84095806_84099052_84099311_84101620_84102108_84116734
H1_mix_00035247	chr16	-	3334	10	NNC	ENSG00000140950.16	novel	1837	9	NA	NA	0	1629	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	78.6390409747735	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCTCAGTTAAAAAAAAAATT	18	True	NA	-2	True	ATTAAA	-27	NA	84504629	84478067	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_84479410_84479467_84480027_84480528_84480709_84482591_84482711_84486630_84487060_84489277_84489423_84495682_84495914_84497933_84498112_84502720_84502843_84504600
H1_mix_00035250	chr16	-	3721	9	NNC	ENSG00000153786.13	novel	2727	10	NA	NA	31	0	intron_retention	FALSE	canonical	3	12	junction_7	102.134638468054	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTCCAAAGCGCCCGTT	21	True	NA	-8	True	AATAAA	-24	NA	85011471	84974459	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr16_-_84976520_84977094_84977226_84977923_84978006_84979188_84979286_84981869_84981995_84990303_84990636_84994099_84994722_84995921_84996008_85011285
H1_mix_00035258	chr16	-	2076	3	FSM	ENSG00000104731.14	ENST00000569487.1	2072	3	0	-4	0	0	multi-exon	FALSE	canonical	1	1	junction_2	40	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCGCGGAGGGTGTCTTC	NA	False	NA	NA	False	AATAAA	-18	NA	87710877	87707811	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_87708076_87708349_87708549_87709264
H1_mix_00035264	chr16	-	2215	13	NIC	ENSG00000141012.13	novel	2344	14	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	16	junction_12	21.488207360214	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGATTTTTCTCTTGGCTG	5	True	NA	-18	True	AATAAA	-29	NA	88856947	88813738	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr16_-_88814526_88818006_88818125_88822588_88822711_88824766_88824870_88826701_88826839_88831997_88832102_88835212_88835353_88835724_88835850_88836200_88836268_88837621_88837766_88840991_88841095_88841896_88841972_88856757
H1_mix_00035266	chr16	-	703	3	FSM	ENSG00000141012.13	ENST00000568311.1	703	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCACCTACTTCTGCTTTT	-18	True	NA	-7	True	AATAAA	-19	NA	88856970	88855127	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr16_-_88855523_88856206_88856302_88856757
H1_mix_00035271	chr16	-	3070	7	ISM	ENSG00000167522.17	ENST00000642600.1	8724	13	-80	18536	2	-1	5prime_fragment	FALSE	canonical	3	92	junction_5	36.3978784485519	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTTTGTTTCCTCTATTC	14	True	NA	-2	True	AATAAA	-25	NA	89490559	89286657	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr16_-_89288671_89290624_89290829_89291012_89291184_89305205_89305345_89316932_89317076_89418283_89418369_89490244
H1_mix_00035284	chr16	+	1640	1	Intergenic	novelGene_500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTCTACTAAAAACACAAAAA	7177	False	NA	NA	False	NA	NA	NA	11352627	11354267	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_11352600_11354300
H1_mix_00035285	chr16	+	667	1	Intergenic	novelGene_501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCCTCAATTCATTGCTA	NA	False	NA	NA	False	NA	NA	NA	11931550	11932217	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_11931600_11932200
H1_mix_00035287	chr16	+	3016	1	Intergenic	novelGene_507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCGACTAAGCAAGACTT	NA	False	NA	NA	False	NA	NA	NA	17216238	17219254	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_17216200_17219300
H1_mix_00035288	chr16	+	701	1	Intergenic	novelGene_508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTATTGCGATGCCCTCC	NA	False	NA	NA	False	NA	NA	NA	18398114	18398815	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_+_18398100_18398800
H1_mix_00035299	chr16_KI270728v1_random	+	331	1	Intergenic	novelGene_534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATAAACGCCGGTGGTATT	NA	False	NA	NA	False	AAAACA	-4	NA	1543814	1544145	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr16_KI270728v1_random_+_1543800_1544100
H1_mix_00035301	chr17	+	1828	2	FSM	ENSG00000187624.9	ENST00000360127.7	1841	2	13	0	1	0	multi-exon	FALSE	canonical	3	18	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTCCATTATAAAAAGCCT	-18	True	NA	NA	False	CATAAA	-17	NA	410337	414666	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_410647_413147
H1_mix_00035303	chr17	+	2236	5	FSM	ENSG00000167695.15	ENST00000308278.13	2224	5	-12	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	59.6631167472837	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTCTCATTTGTGAAAT	-5	True	NA	5	True	ATTAAA	-19	NA	732583	742968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_732770_733097_733182_737845_738048_740504_740601_741300
H1_mix_00035304	chr17	+	2386	4	FSM	ENSG00000167695.15	ENST00000570699.1	2386	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	64.88108781113	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTAATTGTCTTTTTT	0	True	NA	9	True	TTTAAA	-13	NA	732676	742883	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_733182_737845_738048_740504_740601_741300
H1_mix_00035305	chr17	+	1729	4	FSM	ENSG00000171861.11	ENST00000304478.9	1729	4	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_2	31.2836485510668	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTGTTTTGTGTCGTT	-9	True	NA	27	True	AATAAA	-23	NA	782352	792509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_782693_783082_783328_787964_788133_791533
H1_mix_00035306	chr17	+	1128	2	FSM	ENSG00000171861.11	ENST00000574916.1	770	2	199	-557	-43	557	multi-exon	FALSE	canonical	3	243	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTCCTTCATTTGGCT	155	False	NA	20	True	AATAAA	-20	NA	782556	784074	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_782693_783082
H1_mix_00035307	chr17	+	1317	4	NNC	ENSG00000171861.11	novel	1729	4	NA	NA	-42	1583	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_3	62.4873320495176	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTGGTTTTCACATTGA	156	False	NA	NA	False	AATAAA	-16	NA	782557	789781	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_782693_783085_783328_787964_788133_789009
H1_mix_00035310	chr17	+	3199	4	FSM	ENSG00000177370.5	ENST00000327158.5	3182	4	-17	0	-17	0	multi-exon	FALSE	canonical	3	512	junction_3	53.0178167118271	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCCCATCCTACCTGTGT	-15	True	NA	NA	False	ATTAAA	-17	NA	997111	1003671	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_997381_998778_998976_999511_999585_1001011
H1_mix_00035313	chr17	+	542	2	FSM	ENSG00000236618.3	ENST00000425081.3	601	2	54	5	54	-5	multi-exon	FALSE	canonical	3	193	junction_1	0	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTACAAAGTGTAGTTTGT	7	True	NA	18	True	AATAAA	-18	NA	1516930	1518096	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_1517094_1517717
H1_mix_00035314	chr17	+	641	1	FSM	ENSG00000277597.1	ENST00000615078.1	426	1	-246	31	-246	-31	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATAAATTTGCCAAGATT	11	True	NA	-28	True	NA	NA	NA	1684479	1685120	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_1684500_1685100
H1_mix_00035315	chr17	+	7000	10	FSM	ENSG00000167716.19	ENST00000409644.6	6982	10	-18	0	-4	0	multi-exon	FALSE	canonical	3	32	junction_6	6.96729573626262	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGTGAACTGAGGCTTGT	-39	True	NA	6	True	AATAAA	-17	NA	1724685	1738585	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_1728627_1730379_1730488_1730754_1730946_1731067_1731259_1732324_1732491_1732665_1732832_1733526_1734217_1735571_1735718_1736038_1736219_1737364
H1_mix_00035316	chr17	+	1276	2	ISM	ENSG00000167711.14	ENST00000382061.5	2262	10	9633	0	9633	0	3prime_fragment	FALSE	canonical	3	16	junction_1	0	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGGTTTGATGTCACC	-8	True	NA	1	True	AATAAA	-13	NA	1752658	1755265	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_1752791_1754121
H1_mix_00035317	chr17	+	1438	8	FSM	ENSG00000132386.11	ENST00000254722.9	1438	8	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_1	21.2468485058037	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTACTTCGTTCCTC	0	True	NA	29	True	AATAAA	-17	NA	1762059	1777565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_1762114_1766902_1766995_1769851_1770051_1771028_1771185_1771871_1772076_1775057_1775201_1776531_1776743_1777186
H1_mix_00035320	chr17	+	4847	17	FSM	ENSG00000132383.12	ENST00000254719.10	4847	17	0	0	0	0	multi-exon	FALSE	canonical	3	903	junction_5	102.587158065715	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAGTAAATGTTTAAGAAA	0	True	NA	NA	False	NA	NA	NA	1830004	1900082	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_1830127_1842802_1842854_1843919_1843999_1844577_1844687_1853100_1853190_1872433_1872527_1875660_1875794_1877211_1877315_1878992_1879062_1879214_1879408_1879559_1879700_1880542_1880692_1883811_1883945_1888674_1888852_1891832_1891941_1895008_1895096_1897070
H1_mix_00035321	chr17	+	348	1	Intergenic	novelGene_536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAGTGGCACCCAAAGCC	NA	False	NA	NA	False	AATGAA	-30	NA	1857271	1857619	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_1857300_1857600
H1_mix_00035322	chr17	+	2662	13	FSM	ENSG00000108963.19	ENST00000674200.2	2662	13	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_5	22.8321167559111	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGAGGGTTTCTGAGATT	-10	True	NA	14	True	AATAAA	-25	NA	2030136	2043898	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_2030231_2033504_2033658_2033778_2033843_2035969_2036092_2036528_2036687_2036834_2036957_2039754_2039824_2040217_2040375_2040504_2040606_2041102_2041182_2041480_2041622_2041767_2041876_2042604
H1_mix_00035323	chr17	+	2614	13	FSM	ENSG00000108963.19	ENST00000571418.7	2607	13	-7	0	-1	0	multi-exon	FALSE	canonical	3	33	junction_5	35.3084621585251	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGAGGGTTTCTGAGATT	5	True	NA	14	True	AATAAA	-25	NA	2030151	2043898	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_2030231_2033504_2033658_2033778_2033843_2035969_2036092_2036528_2036654_2036834_2036957_2039754_2039824_2040217_2040375_2040504_2040606_2041102_2041182_2041480_2041622_2041767_2041876_2042604
H1_mix_00035324	chr17	+	2681	13	NNC	ENSG00000108963.19	novel	2662	13	NA	NA	3	-5	intron_retention	FALSE	canonical	2	3	junction_10	42.7222131917343	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCATCTTGAGGGTTTCTG	15	True	NA	9	True	AATAAA	-20	NA	2030161	2043893	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_2030231_2033504_2033658_2033778_2033843_2035969_2036092_2036528_2036687_2036834_2036957_2039754_2039824_2040217_2040375_2040504_2040606_2041102_2041231_2041480_2041622_2041767_2041876_2042604
H1_mix_00035325	chr17	+	2559	13	NIC	ENSG00000108963.19	novel	2607	13	NA	NA	-47	-473	intron_retention	FALSE	canonical	3	33	junction_5	56.5028883234201	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAGCATCTTTTTCCTG	1133	False	NA	10	True	AATAAA	-14	NA	2030089	2043425	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_2030231_2033504_2033658_2033778_2033843_2035969_2036092_2036528_2036654_2036834_2036957_2039754_2039824_2040217_2040375_2040504_2040606_2041102_2041182_2041480_2041622_2041767_2042232_2042604
H1_mix_00035326	chr17	+	2305	7	FSM	ENSG00000108963.19	ENST00000570867.6	2739	7	434	0	-154	0	multi-exon	FALSE	canonical	3	118	junction_5	9.45897574910847	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGAGGGTTTCTGAGATT	5956	False	NA	14	True	AATAAA	-25	NA	2039398	2043898	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_2039824_2040217_2040375_2040504_2040606_2041102_2041182_2041480_2041622_2041767_2041876_2042604
H1_mix_00035327	chr17	+	3081	2	FSM	ENSG00000108963.19	ENST00000572684.2	3081	2	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGAGGGTTTCTGAGATT	462	False	NA	14	True	AATAAA	-25	NA	2040671	2043898	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_2041622_2041767
H1_mix_00035328	chr17	+	1938	3	FSM	ENSG00000108963.19	ENST00000263084.7	1827	3	-19	-92	0	92	multi-exon	FALSE	canonical	3	118	junction_1	86	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGGATACTTTGAGGAT	28	False	NA	106	True	NA	NA	NA	2041533	2043990	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_2041622_2041767_2042232_2042604
H1_mix_00035329	chr17	+	2489	8	FSM	ENSG00000167720.13	ENST00000344595.10	2482	8	-7	0	-7	0	multi-exon	FALSE	canonical	3	87	junction_1	16.9428812334206	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGACCTGCAGGGTCTG	NA	False	NA	11	True	AATAAA	-24	NA	2303942	2325260	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_2304018_2315556_2315729_2317869_2317997_2318825_2318930_2321305_2321426_2321541_2321617_2323135_2323346_2323654
H1_mix_00035332	chr17	+	1343	9	FSM	ENSG00000141258.13	ENST00000573062.5	1335	9	-8	0	0	0	multi-exon	FALSE	canonical	3	129	junction_4	14.0512454963964	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGACACCTGCTGTCCTTT	-2	True	NA	NA	False	NA	NA	NA	2337497	2364965	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_2337746_2343544_2343621_2361636_2361800_2362108_2362271_2362837_2363135_2363464_2363600_2364058_2364184_2364595_2364664_2364896
H1_mix_00035333	chr17	+	4666	22	NIC	ENSG00000141258.13	novel	4734	23	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	41.4113812173787	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTGGAGCCTCTGGGAC	-2	True	NA	12	True	AATAAA	-12	NA	2337497	2381050	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_2337746_2361636_2361800_2362108_2362271_2362837_2362906_2362988_2363135_2363464_2363600_2364058_2364184_2364595_2364664_2364896_2365058_2365214_2365342_2371261_2371416_2372189_2372255_2372342_2372489_2372952_2373082_2373330_2373514_2375491_2375876_2376136_2376262_2376732_2376816_2376958_2377069_2377856_2377954_2379035_2379204_2379431
H1_mix_00035334	chr17	+	4881	24	FSM	ENSG00000141258.13	ENST00000268989.8	4878	24	-3	0	0	0	multi-exon	FALSE	canonical	3	23	junction_11	43.8938830346997	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGCCTCTGGGACTGGA	-2	True	NA	16	True	AATAAA	-16	NA	2337497	2381054	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_2337746_2343544_2343621_2361636_2361800_2362108_2362271_2362837_2362906_2362988_2363135_2363464_2363600_2364058_2364184_2364595_2364664_2364896_2365058_2365214_2365342_2367270_2367406_2371261_2371416_2372189_2372255_2372342_2372489_2372952_2373082_2373330_2373514_2375491_2375876_2376136_2376262_2376732_2376816_2376958_2377069_2377856_2377954_2379035_2379204_2379431
H1_mix_00035338	chr17	+	3119	9	ISM	ENSG00000141258.13	ENST00000426855.6	4734	23	35218	8	151	0	3prime_fragment	FALSE	canonical	3	160	junction_2	10.2072278312968	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTGGAGCCTCTGGGAC	NA	False	NA	12	True	AATAAA	-12	NA	2372731	2381050	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_2373082_2373330_2373514_2375491_2375876_2376136_2376262_2376732_2376816_2376958_2377069_2377856_2377954_2379035_2379204_2379431
H1_mix_00035340	chr17	+	557	5	FSM	ENSG00000007168.14	ENST00000576586.5	557	5	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	222.154788379634	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCTCTTGGTCAGAAACG	NA	False	NA	44	True	AATGAA	-25	NA	2593209	2667045	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_2593331_2638098_2638321_2665371_2665457_2666015_2666091_2666991
H1_mix_00035341	chr17	+	5628	11	FSM	ENSG00000007168.14	ENST00000397195.10	5589	11	-39	0	-39	0	multi-exon	FALSE	canonical	3	477	junction_4	44.4185771946829	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGATTTTTTTTTTTTT	0	True	NA	13	True	ATTAAA	-15	NA	2593614	2685615	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_2594007_2638098_2638321_2665371_2665457_2666015_2666091_2666991_2667199_2670162_2670332_2672654_2672758_2674059_2674289_2676504_2676607_2680163_2680321_2681728
H1_mix_00035342	chr17	+	5204	10	FSM	ENSG00000007168.14	ENST00000676353.1	5204	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	172.381360167894	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTAGATGTGATTTTTT	-3	True	NA	6	True	ATTAAA	-41	NA	2593946	2685608	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_2594007_2638098_2638321_2666015_2666091_2666991_2667199_2670162_2670332_2672654_2672758_2674059_2674289_2676504_2676607_2680163_2680321_2681728
H1_mix_00035343	chr17	+	3175	26	FSM	ENSG00000132359.15	ENST00000637138.1	3175	26	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_2	36.3506038464287	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCCACAAAGGGGTGGGAA	56	False	NA	NA	False	NA	NA	NA	2755704	3034207	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_2755768_2770328_2770446_2800514_2800551_2905283_2905369_2957758_2957795_2962669_2962715_2963429_2963463_2963855_2964069_2965539_2965644_2980286_2980366_2981194_2981249_2984982_2985067_2991296_2991398_2995336_2995467_2998220_2998377_3005368_3005441_3005954_3006042_3008010_3008146_3018060_3018199_3020476_3020596_3026007_3026122_3026349_3026465_3026943_3027071_3030921_3030999_3032410_3032450_3033391
H1_mix_00035344	chr17	+	7070	24	NNC	ENSG00000132359.15	novel	606	6	NA	NA	57044	0	intron_retention	FALSE	canonical	3	81	junction_4	15.0610603462161	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTTCAGAGTTCTTTG	723	False	NA	6	True	AATAAA	-19	NA	2853525	3037741	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_2854103_2905283_2905369_2957758_2957795_2962669_2962715_2963429_2963463_2963855_2964069_2965539_2965644_2980286_2980366_2981194_2981249_2984982_2985067_2991296_2991398_2995336_2995467_2998220_2998377_3005368_3005441_3005954_3006042_3008010_3008146_3018060_3018199_3020476_3020596_3026007_3026122_3026349_3026465_3026943_3027071_3030921_3030999_3032410_3032450_3033391
H1_mix_00035345	chr17	+	7025	23	NNC	ENSG00000132359.15	novel	606	6	NA	NA	57044	0	intron_retention	FALSE	canonical	3	31	junction_3	21.6108042308502	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTTCAGAGTTCTTTG	723	False	NA	6	True	AATAAA	-19	NA	2853525	3037741	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_2854103_2905283_2905369_2957758_2957795_2963429_2963463_2963855_2964069_2965539_2965644_2980286_2980366_2981194_2981249_2984982_2985067_2991296_2991398_2995336_2995467_2998220_2998377_3005368_3005441_3005954_3006042_3008010_3008146_3018060_3018199_3020476_3020596_3026007_3026122_3026349_3026465_3026943_3027071_3030921_3030999_3032410_3032450_3033391
H1_mix_00035347	chr17	+	2657	12	FSM	ENSG00000040531.16	ENST00000673965.1	2657	12	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	19.8461021007915	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGAGCTTGTCAGTCC	-22	True	NA	-72	True	NA	NA	NA	3636458	3661448	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_3636704_3637106_3637317_3640187_3640268_3647443_3647523_3648846_3648932_3654997_3655102_3655220_3655353_3656486_3656587_3656675_3656796_3658004_3658176_3659857_3659976_3660235
H1_mix_00035348	chr17	+	2335	11	FSM	ENSG00000040531.16	ENST00000488623.6	2322	11	-13	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	25.3416652965033	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAACCTCCTTCCCTCTGC	2	True	NA	NA	False	NA	NA	NA	3636725	3661371	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_3636832_3637106_3637317_3647443_3647523_3648846_3648932_3654997_3655102_3655220_3655327_3656486_3656587_3656675_3656796_3658004_3658176_3659857_3659976_3660235
H1_mix_00035350	chr17	+	4141	12	FSM	ENSG00000040531.16	ENST00000046640.9	4139	12	-2	0	0	0	multi-exon	FALSE	canonical	3	45	junction_5	9.916177616017	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGGCAAAGAGGAAAATGAC	-3	True	NA	NA	False	ATTAAA	-22	NA	3636757	3663103	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_3636832_3637106_3637317_3640187_3640268_3647443_3647523_3648846_3648932_3654997_3655102_3655220_3655353_3656486_3656587_3656675_3656796_3658004_3658176_3659857_3659976_3660235
H1_mix_00035351	chr17	+	803	6	FSM	ENSG00000040531.16	ENST00000399306.7	803	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	27.3671335729557	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCATTGCTGAGAGGGGAT	68	False	NA	NA	False	AATAAA	-21	NA	3636828	3650519	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_3636832_3637106_3637317_3640187_3640268_3647443_3647523_3648846_3648932_3650173
H1_mix_00035352	chr17	+	483	1	FSM	ENSG00000240898.1	ENST00000486753.1	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGGTGTTAAACAAAAAAAA	42	False	NA	NA	False	NA	NA	NA	3665219	3665702	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_3665200_3665700
H1_mix_00035353	chr17	+	656	2	FSM	ENSG00000127774.7	ENST00000248378.6	656	2	0	0	0	0	multi-exon	FALSE	canonical	3	1261	junction_1	0	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGGAGTTCTTTCCTG	2	True	NA	18	True	ATTAAA	-15	NA	3668811	3669665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_3668900_3669097
H1_mix_00035354	chr17	+	815	2	FSM	ENSG00000127774.7	ENST00000397133.2	762	2	-56	3	-46	0	multi-exon	FALSE	canonical	3	158	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGGAGTTCTTTCCTG	3588	False	NA	18	True	ATTAAA	-15	NA	3668765	3669665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_3669013_3669097
H1_mix_00035355	chr17	+	3618	1	FSM	ENSG00000177602.5	ENST00000325418.5	2797	1	13	-834	13	834	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTACAGGCGCCCGCCAC	5	True	NA	NA	False	NA	NA	NA	3723915	3727533	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_3723900_3727500
H1_mix_00035356	chr17	+	694	4	FSM	ENSG00000167740.10	ENST00000577075.6	694	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	33.2365260920372	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGCCTCTTCTGTTAATAA	NA	False	NA	NA	False	NA	NA	NA	4143167	4157085	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4143314_4149890_4150032_4154673_4154861_4156865
H1_mix_00035357	chr17	+	2384	4	FSM	ENSG00000167740.10	ENST00000301391.8	1969	4	-61	-354	-32	354	multi-exon	FALSE	canonical	3	65	junction_1	10.6144555520604	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCCCCTGTCCCCTTCAC	NA	False	NA	NA	False	NA	NA	NA	4143135	4158051	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4144006_4149890_4150032_4154673_4154861_4156865
H1_mix_00035358	chr17	+	2114	4	FSM	ENSG00000167740.10	ENST00000575251.5	1588	4	-1	-525	-1	400	multi-exon	FALSE	canonical	2	5	junction_1	38.8930156540563	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCTCACTGGCAGACCCG	4	True	NA	NA	False	NA	NA	NA	4143209	4158097	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4143764_4149890_4150032_4154673_4154861_4156865
H1_mix_00035359	chr17	+	260	1	FSM	ENSG00000274363.1	ENST00000616113.1	740	1	-171	651	-171	-651	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTTTCCTCATGAGAAA	NA	False	NA	NA	False	NA	NA	NA	4267519	4267779	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4267500_4267800
H1_mix_00035360	chr17	+	642	5	FSM	ENSG00000183018.9	ENST00000571668.5	704	5	62	0	40	0	multi-exon	FALSE	canonical	2	3	junction_2	2.1650635094611	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGACAGCCCCAAGTGGGT	NA	False	NA	NA	False	NA	NA	NA	4533787	4537718	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4533854_4536075_4536175_4536262_4536427_4536899_4536947_4537452
H1_mix_00035361	chr17	+	1630	2	FSM	ENSG00000183018.9	ENST00000570979.1	1768	2	138	0	138	0	multi-exon	FALSE	canonical	3	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTGGTGGCTCCCTCAC	2511	False	NA	NA	False	AATAAA	-14	NA	4536899	4539035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4536947_4537452
H1_mix_00035362	chr17	+	220	1	FSM	ENSG00000262519.1	ENST00000575018.1	310	1	165	-75	165	75	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATATAAAGCATGAAGACTA	NA	False	NA	NA	False	TTTAAA	-28	NA	4572370	4572590	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4572400_4572600
H1_mix_00035363	chr17	+	2309	8	FSM	ENSG00000188176.12	ENST00000389313.9	2295	8	-14	0	-14	0	multi-exon	FALSE	canonical	3	13	junction_3	6.23354977979184	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGGTTTGTCATTTCTG	18	False	NA	9	True	CATAAA	-20	NA	4584514	4608319	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4585005_4592360_4592449_4592928_4593172_4593821_4593898_4595144_4595328_4596859_4596978_4597171_4597324_4607360
H1_mix_00035364	chr17	+	2096	7	NIC	ENSG00000188176.12	novel	2295	8	NA	NA	-45	-1	combination_of_known_junctions	FALSE	canonical	3	15	junction_2	5.73488351136175	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGGGTTTGTCATTTCT	-13	True	NA	8	True	CATAAA	-19	NA	4584483	4608318	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_4585005_4592360_4592449_4593821_4593898_4595144_4595328_4596859_4596978_4597171_4597324_4607360
H1_mix_00035365	chr17	+	484	2	FSM	ENSG00000244184.1	ENST00000497885.1	472	2	-12	0	-12	0	multi-exon	FALSE	canonical	3	10	junction_1	0	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGGTCTGCGTGTGGCTT	NA	False	NA	7	True	CATAAA	-17	NA	4704217	4705529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4704371_4705198
H1_mix_00035366	chr17	+	2003	15	FSM	ENSG00000141480.18	ENST00000269260.7	1778	15	-226	1	-190	0	multi-exon	FALSE	canonical	3	307	junction_1	61.3775535650669	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGTGTGTGTTTTCTCTG	5156	False	NA	18	True	AATAAA	-14	NA	4710405	4721496	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4710745_4715012_4715044_4715972_4716034_4716146_4716192_4716411_4716609_4717216_4717277_4717684_4717753_4717887_4718024_4718260_4718346_4718611_4718685_4719282_4719421_4720215_4720300_4720392_4720473_4720585_4720641_4720945
H1_mix_00035367	chr17	+	1972	14	FSM	ENSG00000141480.18	ENST00000574954.5	1348	14	-224	-400	-190	0	multi-exon	FALSE	canonical	3	198	junction_1	79.9128963679653	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGTGTGTGTTTTCTCTG	5156	False	NA	18	True	AATAAA	-14	NA	4710405	4721496	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4710745_4715972_4716034_4716146_4716192_4716411_4716609_4717216_4717277_4717684_4717753_4717887_4718024_4718260_4718346_4718611_4718685_4719282_4719421_4720215_4720300_4720392_4720473_4720585_4720641_4720945
H1_mix_00035368	chr17	+	1949	15	NNC	ENSG00000141480.18	novel	1778	15	NA	NA	-110	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	126.317727842718	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGTGTGTGTTTTCTCTG	-4	True	NA	18	True	AATAAA	-14	NA	4710485	4721496	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_4710745_4714986_4715044_4715972_4716034_4716146_4716192_4716411_4716609_4717216_4717277_4717684_4717753_4717887_4718024_4718260_4718346_4718611_4718685_4719282_4719421_4720215_4720300_4720392_4720473_4720585_4720641_4720945
H1_mix_00035370	chr17	+	674	3	FSM	ENSG00000161920.11	ENST00000575284.5	652	3	-22	0	-22	0	multi-exon	TRUE	canonical	1	2	junction_2	84	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGGCAAATGGTGGGCAT	NA	False	NA	NA	False	NA	NA	NA	4731405	4733312	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4731575_4731775_4731907_4732938
H1_mix_00035371	chr17	+	858	3	FSM	ENSG00000161920.11	ENST00000293777.6	836	3	-22	0	-22	0	multi-exon	FALSE	canonical	3	170	junction_1	3.5	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGATCAGACTCTCACTGG	NA	False	NA	NA	False	AATAAA	-33	NA	4731405	4733607	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4731575_4731775_4731907_4733049
H1_mix_00035372	chr17	+	728	2	FSM	ENSG00000161920.11	ENST00000674339.1	706	2	-22	0	-22	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCAGACTCTCACTGGG	NA	False	NA	NA	False	AATAAA	-34	NA	4731405	4733608	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4731575_4733049
H1_mix_00035373	chr17	+	445	2	ISM	ENSG00000141497.14	ENST00000573751.2	2409	13	4707	3	1479	0	3prime_fragment	FALSE	canonical	3	12	junction_1	0	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGAGTCATGGATCTTT	5178	False	NA	5	True	AATAAA	-16	NA	4745225	4746113	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_4745376_4745818
H1_mix_00035374	chr17	+	891	6	FSM	ENSG00000142507.10	ENST00000614486.4	871	6	-20	0	-20	0	multi-exon	FALSE	canonical	3	120	junction_5	2699.12007884051	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGGGGTTCTTTTTTTT	5521	False	NA	37	True	AATAAA	-23	NA	4796123	4798502	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4796297_4796727_4796796_4797437_4797570_4797681_4797812_4798008_4798154_4798259
H1_mix_00035375	chr17	+	844	6	FSM	ENSG00000142507.10	ENST00000270586.8	824	6	-20	0	0	0	multi-exon	FALSE	canonical	3	6421	junction_3	391.823123360529	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTACTTTGGGGTTCT	5541	False	NA	30	True	AATAAA	-16	NA	4796143	4798495	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4796297_4796727_4796796_4797437_4797570_4797681_4797812_4798008_4798154_4798279
H1_mix_00035377	chr17	+	3408	25	FSM	ENSG00000129219.14	ENST00000572940.5	3391	25	-17	0	0	0	multi-exon	FALSE	canonical	3	56	junction_23	24.2525771826418	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTCATGCGTCTTCCTTGG	-14	True	NA	8	True	AATAAA	-12	NA	4807151	4823428	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4807226_4807771_4807882_4807983_4808115_4808273_4808417_4809099_4809206_4809297_4809364_4809492_4809552_4809690_4809784_4809876_4810030_4810801_4810952_4814417_4814502_4814632_4814712_4815475_4815587_4815763_4815935_4816619_4816747_4816936_4817056_4817145_4817260_4818001_4818107_4818296_4818386_4818493_4818608_4818773_4818824_4819083_4819219_4819428_4819550_4821792_4821908_4822639
H1_mix_00035378	chr17	+	3466	25	FSM	ENSG00000129219.14	ENST00000263088.11	3443	25	-23	0	-23	0	multi-exon	FALSE	canonical	3	127	junction_23	15.6097703556316	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGCGTCTTCCTTGGAG	-37	True	NA	10	True	AATAAA	-14	NA	4807128	4823430	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4807226_4807771_4807882_4807983_4808115_4808273_4808417_4809099_4809206_4809297_4809364_4809492_4809552_4809690_4809784_4809876_4810030_4810801_4810952_4814417_4814502_4814632_4814712_4815475_4815587_4815763_4815935_4816619_4816747_4816936_4817056_4817145_4817260_4818001_4818107_4818296_4818386_4818493_4818608_4818773_4818824_4819083_4819219_4819428_4819583_4821792_4821908_4822639
H1_mix_00035381	chr17	+	5173	32	NNC	ENSG00000141503.17	novel	5017	32	NA	NA	-163	3	at_least_one_novel_splicesite	FALSE	canonical	3	69	junction_21	39.2766807187552	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGCAGGCCGCATGTCC	NA	False	NA	8	True	AATAAA	-20	NA	4833176	4898057	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_4833641_4878316_4878383_4880983_4881041_4881131_4881258_4884362_4884474_4884911_4885003_4885482_4885614_4885910_4885966_4886119_4886199_4886450_4886627_4887109_4887180_4887579_4887791_4889646_4889764_4890516_4890736_4890950_4891125_4891455_4891717_4892148_4892235_4892401_4892513_4892655_4892769_4892978_4893068_4893433_4893598_4893990_4894094_4894173_4894312_4894524_4894634_4895074_4895243_4895349_4895494_4895697_4895833_4896002_4896104_4896192_4896343_4896428_4896589_4896673_4896814_4897203
H1_mix_00035382	chr17	+	5016	32	FSM	ENSG00000141503.17	ENST00000355280.11	5017	32	0	1	0	0	multi-exon	FALSE	canonical	3	118	junction_21	33.6602972170611	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGGCCGCATGTCCTTG	-39	True	NA	11	True	AATAAA	-23	NA	4833339	4898060	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4833641_4878316_4878383_4880983_4881041_4881131_4881258_4884362_4884474_4884911_4885003_4885482_4885614_4885910_4885966_4886119_4886199_4886450_4886627_4887109_4887180_4887579_4887791_4889646_4889764_4890516_4890736_4890950_4891125_4891455_4891717_4892148_4892235_4892401_4892513_4892655_4892769_4892978_4893068_4893433_4893598_4893987_4894094_4894173_4894312_4894524_4894634_4895074_4895243_4895349_4895494_4895697_4895833_4896002_4896104_4896192_4896343_4896428_4896589_4896673_4896814_4897203
H1_mix_00035383	chr17	+	4953	32	NNC	ENSG00000141503.17	novel	5017	32	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_15	50.3464583549486	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGGCCGCATGTCCTTG	-39	True	NA	11	True	AATAAA	-23	NA	4833339	4898060	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_4833641_4878316_4878383_4880983_4881041_4881131_4881258_4884362_4884474_4884911_4885003_4885482_4885614_4885910_4885966_4886119_4886199_4886450_4886627_4887109_4887180_4887579_4887791_4889646_4889764_4890516_4890736_4890950_4891125_4891515_4891717_4892148_4892235_4892401_4892513_4892655_4892769_4892978_4893068_4893433_4893598_4893990_4894094_4894173_4894312_4894524_4894634_4895074_4895243_4895349_4895494_4895697_4895833_4896002_4896104_4896192_4896343_4896428_4896589_4896673_4896814_4897203
H1_mix_00035388	chr17	+	921	5	NIC	ENSG00000108523.16	novel	1728	11	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	72	junction_2	324.731427490473	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTGAATGAGGAAGGGG	3370	False	NA	NA	False	NA	NA	NA	4940007	4942466	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_4940361_4940486_4940727_4940872_4940994_4941076_4941158_4942340
H1_mix_00035389	chr17	+	1876	11	FSM	ENSG00000108523.16	ENST00000571816.5	1728	11	0	-148	0	117	multi-exon	FALSE	canonical	3	72	junction_2	266.192580662948	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCGGCATTTGCTATGAC	3370	False	NA	145	True	NA	NA	NA	4940007	4945339	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4940231_4940486_4940727_4940872_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
H1_mix_00035390	chr17	+	1775	10	FSM	ENSG00000108523.16	ENST00000262482.11	1775	10	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_1	171.139968706579	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGGGTAAGATCATTCTC	-3	True	NA	28	True	AATAAA	-21	NA	4940267	4945222	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4940361_4940486_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
H1_mix_00035392	chr17	+	1757	9	FSM	ENSG00000108523.16	ENST00000575111.5	1757	9	0	0	0	0	multi-exon	FALSE	canonical	3	713	junction_3	44.4297197830461	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCTAATAAAATTGTTTCT	11	False	NA	-3	True	NA	NA	NA	4940380	4945191	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
H1_mix_00035393	chr17	+	1436	10	FSM	ENSG00000108523.16	ENST00000576229.5	1436	10	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	229.500800181504	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGGTCTTCACTTCTTG	90	False	NA	-22	True	GGGGCT	-28	NA	4940486	4945172	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4940727_4940922_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
H1_mix_00035394	chr17	+	1536	10	ISM	ENSG00000108523.16	ENST00000571816.5	1728	11	479	-31	0	0	3prime_fragment	FALSE	canonical	3	72	junction_1	226.102784449468	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGGGTAAGATCATTCTC	90	False	NA	28	True	AATAAA	-21	NA	4940486	4945222	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_4940727_4940872_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
H1_mix_00035395	chr17	+	1644	12	NIC	ENSG00000108515.18	novel	1448	11	NA	NA	186	0	combination_of_known_junctions	FALSE	canonical	1	26	junction_1	46.4172595428799	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACAGCTGTGTGCTTCTTTG	214	False	NA	21	True	AATAAA	-17	NA	4950375	4957129	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_4950631_4951827_4951915_4952794_4952891_4953050_4953110_4953271_4953342_4953711_4953846_4955074_4955298_4955406_4955605_4955941_4956144_4956572_4956682_4956830_4956890_4956977
H1_mix_00035396	chr17	+	1477	12	FSM	ENSG00000108515.18	ENST00000519602.6	1453	12	-24	0	0	0	multi-exon	FALSE	canonical	1	49	junction_4	34.9240024970395	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACAGCTGTGTGCTTCTTTG	538	False	NA	21	True	AATAAA	-17	NA	4951094	4957129	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4951183_4951827_4951915_4952794_4952891_4953050_4953110_4953271_4953342_4953711_4953846_4955074_4955298_4955406_4955605_4955941_4956144_4956572_4956682_4956830_4956890_4956977
H1_mix_00035397	chr17	+	1521	12	FSM	ENSG00000108515.18	ENST00000323997.10	1521	12	0	0	0	0	multi-exon	FALSE	canonical	1	41	junction_1	43.4286724040335	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTGTGTGCTTCTTTGTG	538	False	NA	23	True	AATAAA	-19	NA	4951094	4957131	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4951225_4951827_4951915_4952794_4952891_4953050_4953110_4953271_4953342_4953711_4953846_4955074_4955298_4955406_4955605_4955941_4956144_4956572_4956682_4956830_4956890_4956977
H1_mix_00035399	chr17	+	513	2	FSM	ENSG00000262227.1	ENST00000574260.1	551	2	38	0	38	0	multi-exon	FALSE	canonical	3	3	junction_1	0	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGGGTTCCTTCTGGCTG	17	True	NA	NA	False	NA	NA	NA	4987743	4988446	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4988226_4988415
H1_mix_00035401	chr17	+	7917	23	FSM	ENSG00000129250.12	ENST00000320785.10	7917	23	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_9	33.6055141087351	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCTCCACCAGTCTTA	-1	True	NA	11	True	AATAAA	-18	NA	4997949	5028401	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4998157_4999849_4999971_5000219_5000353_5000771_5000849_5001221_5001402_5002058_5002125_5002463_5002643_5002730_5002843_5003611_5003690_5003850_5003917_5003997_5004074_5004566_5004646_5004854_5005001_5006914_5007085_5007262_5007343_5007466_5007543_5013652_5013733_5014742_5014838_5019995_5020080_5020491_5020679_5020805_5020879_5022091_5022710_5023467
H1_mix_00035402	chr17	+	474	3	FSM	ENSG00000234327.9	ENST00000413077.2	508	3	18	16	6	0	multi-exon	FALSE	canonical	3	378	junction_1	19.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAGTCTTTGAACATTCA	-27	True	NA	10	True	AATAAA	-15	NA	5111931	5114377	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_5112119_5113385_5113453_5114157
H1_mix_00035403	chr17	+	462	3	FSM	ENSG00000234327.9	ENST00000665679.2	469	3	6	1	6	-1	multi-exon	FALSE	canonical	3	112	junction_1	152.5	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTTGAACATTCATTGCA	-27	True	NA	15	True	AATAAA	-20	NA	5111931	5114382	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_5112102_5113385_5113453_5114157
H1_mix_00035404	chr17	+	1938	5	ISM	ENSG00000029725.17	ENST00000341923.10	2490	17	-222	44017	0	2517	5prime_fragment	FALSE	canonical	3	234	junction_4	35.8712977183709	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGAAAATAAATGGGAATTT	-10	True	NA	NA	False	AATAAA	-7	NA	5282264	5339206	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_5282521_5308693_5308823_5331948_5332153_5335183_5335345_5338018
H1_mix_00035405	chr17	+	5928	18	FSM	ENSG00000029725.17	ENST00000537505.6	5909	18	-19	0	0	0	multi-exon	FALSE	canonical	3	165	junction_8	42.0262728832423	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTAATGTTGAAACATCT	-10	True	NA	26	True	AATAAA	-30	NA	5282264	5386340	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_5282521_5308693_5308823_5331948_5332153_5335183_5335345_5338018_5338139_5346789_5346926_5350450_5350630_5354358_5354491_5361207_5361676_5362911_5363017_5365121_5365239_5368369_5368469_5373313_5373455_5377115_5377306_5378176_5378233_5380363_5380463_5381388_5381506_5383121
H1_mix_00035406	chr17	+	2490	17	FSM	ENSG00000029725.17	ENST00000341923.10	2490	17	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_15	64.5876342653917	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCTCATGGCAGGATTCT	166	False	NA	NA	False	ACTAAA	-34	NA	5282486	5383223	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_5282521_5308693_5308823_5331948_5332153_5335183_5335345_5338018_5338139_5346789_5346926_5350450_5350630_5354358_5354491_5361207_5361676_5362911_5363017_5365121_5365239_5368369_5368469_5373313_5373455_5377115_5377306_5378176_5378233_5381388_5381506_5383121
H1_mix_00035408	chr17	+	1161	4	FSM	ENSG00000129197.15	ENST00000536255.6	1057	4	342	-446	95	284	multi-exon	TRUE	canonical	3	275	junction_3	248.210931803309	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCCTGCAAAGAACAATATT	493	False	NA	NA	False	NA	NA	NA	5419982	5433161	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5432541
H1_mix_00035409	chr17	+	1394	6	FSM	ENSG00000129197.15	ENST00000381208.9	1394	6	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_5	263.455954573056	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	151	False	NA	4	True	AATAAA	-15	NA	5419640	5432876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5426083_5426235_5426300_5432541
H1_mix_00035410	chr17	+	1282	5	FSM	ENSG00000129197.15	ENST00000573577.5	1282	5	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_3	338.584830581643	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	151	False	NA	4	True	AATAAA	-15	NA	5419640	5432876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5426235_5426300_5432541
H1_mix_00035412	chr17	+	1471	6	FSM	ENSG00000129197.15	ENST00000539417.6	1471	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	293.834919640263	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	151	False	NA	4	True	AATAAA	-15	NA	5419640	5432876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5426083_5428070_5428212_5432541
H1_mix_00035414	chr17	+	1423	6	FSM	ENSG00000129197.15	ENST00000571558.5	1423	6	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_3	268.521433036545	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	151	False	NA	4	True	AATAAA	-15	NA	5419640	5432876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5426235_5426300_5428070_5428212_5432541
H1_mix_00035416	chr17	+	1010	7	FSM	ENSG00000129197.15	ENST00000381209.8	995	7	-15	0	0	0	multi-exon	FALSE	canonical	3	303	junction_4	199.660267009293	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATTTAAATTTGGTATT	9	True	NA	5	True	AATAAA	-16	NA	5420166	5432877	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5426083_5426235_5426300_5428070_5428212_5432541
H1_mix_00035417	chr17	+	2728	5	FSM	ENSG00000129197.15	ENST00000573126.1	2728	5	0	0	0	0	multi-exon	FALSE	canonical	3	407	junction_4	183.704926444557	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCCGACATCTGTTCTT	10	True	NA	24	True	AAGAAA	-7	NA	5420199	5432704	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5428212_5432541
H1_mix_00035418	chr17	+	2190	2	FSM	ENSG00000167842.16	ENST00000573759.1	2204	2	14	0	14	0	multi-exon	FALSE	canonical	3	83	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTACATGAAATATGTT	25	False	NA	-46	True	AATGAA	-24	NA	5486409	5490737	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_5486685_5488822
H1_mix_00035419	chr17	+	2584	3	FSM	ENSG00000167842.16	ENST00000611091.5	2502	3	-156	74	14	0	multi-exon	FALSE	canonical	3	64	junction_1	23.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTACATGAAATATGTT	25	False	NA	-46	True	AATGAA	-24	NA	5486409	5490737	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_5486685_5488195_5488590_5488822
H1_mix_00035420	chr17	+	2519	3	NNC	ENSG00000167842.16	novel	2505	3	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	53	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTTGGTTTTTTATTTTC	15	False	NA	28	True	ATTAAA	-16	NA	5486927	5490811	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_5487064_5488195_5488590_5488822
H1_mix_00035421	chr17	+	5808	9	FSM	ENSG00000179314.16	ENST00000574946.5	5884	9	76	0	65	0	multi-exon	FALSE	canonical	1	1	junction_1	18.0377208926183	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGGTTGAGTTTAATTTC	66	False	NA	20	True	AATAAA	-18	NA	6069181	6124427	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_6069208_6080370_6081086_6087989_6088105_6090320_6090506_6095101_6095224_6109606_6109767_6110770_6110936_6117987_6118189_6120308
H1_mix_00035422	chr17	+	6058	9	FSM	ENSG00000179314.16	ENST00000317744.10	6056	9	-2	0	-2	0	multi-exon	FALSE	canonical	3	34	junction_1	8.12403840463596	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGGTTGAGTTTAATTTC	-10	True	NA	20	True	AATAAA	-18	NA	6070376	6124427	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_6070653_6080370_6081086_6087989_6088105_6090320_6090506_6095101_6095224_6109606_6109767_6110770_6110936_6117987_6118189_6120308
H1_mix_00035423	chr17	+	1983	6	FSM	ENSG00000129195.16	ENST00000572447.6	1908	6	-75	0	-61	0	multi-exon	TRUE	canonical	0	0	junction_3	326.120223230636	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATCTGTCACAGATAATAC	NA	False	NA	7	True	AATAAA	-18	NA	6444379	6451469	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_6444489_6445075_6445405_6447462_6447759_6449311_6449408_6450027_6450073_6450361
H1_mix_00035424	chr17	+	1980	5	FSM	ENSG00000129195.16	ENST00000250056.12	1473	5	-61	-446	-61	42	multi-exon	FALSE	canonical	0	0	junction_3	398.066812859349	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCAGACCACAGACAAGGT	NA	False	NA	49	True	NA	NA	NA	6444379	6451511	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_6444489_6445075_6445405_6447462_6447759_6449311_6449408_6450361
H1_mix_00035427	chr17	+	1556	6	FSM	ENSG00000129195.16	ENST00000572595.6	1551	6	-5	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	285.895505386146	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCATTTGACATCTGTTCC	18	False	NA	13	True	AATAAA	-7	NA	6444440	6451055	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_6444489_6445075_6445405_6446094_6446188_6447462_6447759_6449311_6449408_6450361
H1_mix_00035429	chr17	+	391	4	FSM	ENSG00000129235.11	ENST00000576020.5	391	4	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_1	1475.55029282863	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAAACTGTATACTTGCT	185	False	NA	-6	True	NA	NA	NA	6640984	6643067	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_6641101_6641752_6641835_6642248_6642325_6642950
H1_mix_00035431	chr17	+	750	4	FSM	ENSG00000129235.11	ENST00000570330.5	459	4	-289	-2	-258	0	multi-exon	FALSE	canonical	0	0	junction_1	1579.9874120455	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACTGGCATGTGTCT	2135	False	NA	12	True	AATAAA	-43	NA	6640726	6643116	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_6641153_6641752_6641835_6642248_6642325_6642950
H1_mix_00035432	chr17	+	1917	4	FSM	ENSG00000129235.11	ENST00000250101.10	1917	4	0	0	0	0	multi-exon	FALSE	canonical	3	2869	junction_3	332.862667710808	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGCCAATGTAGAATCT	0	True	NA	-41	True	NA	NA	NA	6641059	6644541	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_6641228_6641752_6641835_6642248_6642325_6642950
H1_mix_00035433	chr17	+	482	4	FSM	ENSG00000274114.2	ENST00000634646.1	482	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	5.55777733351102	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTCATCCAGGTGAGAGGA	422	False	NA	NA	False	NA	NA	NA	6657718	6660057	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_6657784_6657861_6657985_6658753_6658915_6659924
H1_mix_00035434	chr17	+	984	7	ISM	ENSG00000262943.8	ENST00000574271.6	2490	15	52	4863	-2	366	5prime_fragment	TRUE	canonical	3	4	junction_2	5.29150262212918	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCTGGAGAAAGAACTCCA	16	True	NA	NA	False	NA	NA	NA	6853940	6895482	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_6854061_6854213_6854436_6892002_6892076_6894317_6894520_6894883_6895007_6895095_6895200_6895342
H1_mix_00035435	chr17	+	2456	15	NIC	ENSG00000262943.8	novel	2563	15	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_14	4.22093905791262	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGATTATATGTGTGGTGGT	16	True	NA	NA	False	ATTAAA	-9	NA	6853940	6900345	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_6854061_6854213_6854454_6892002_6892076_6894317_6894520_6894883_6895007_6895095_6895200_6895342_6895504_6896315_6896460_6896553_6896764_6898203_6898291_6898528_6898699_6898799_6898930_6899390_6899491_6899592_6899707_6899867
H1_mix_00035437	chr17	+	2390	14	FSM	ENSG00000108839.12	ENST00000251535.11	2392	14	0	2	0	-2	multi-exon	FALSE	canonical	1	2	junction_1	3.23076923076923	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAAGTAGTCTTCTTTTG	-1	True	NA	19	True	AATAAA	-33	NA	6996048	7010752	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_6996253_6996825_6997028_6998508_6998591_6998714_6998838_6998952_6999057_6999305_6999467_7000335_7000480_7001601_7001812_7005256_7005344_7005857_7006028_7006485_7006608_7009746_7009848_7009955_7010127_7010243
H1_mix_00035438	chr17	+	810	3	FSM	ENSG00000219200.12	ENST00000548577.5	810	3	0	0	0	0	multi-exon	FALSE	canonical	3	1446	junction_1	108	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGTCTGTGCTTGAG	0	True	NA	31	True	AATAAA	-19	NA	7012416	7014532	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7012762_7013665_7013743_7014144
H1_mix_00035439	chr17	+	952	4	FSM	ENSG00000219200.12	ENST00000546395.5	952	4	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_1	755.506158515968	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTCTCTTCAGCCCTGTG	15	False	NA	19	True	AATAAA	-7	NA	7012460	7014520	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7012762_7013318_7013517_7013665_7013743_7014144
H1_mix_00035440	chr17	+	601	3	FSM	ENSG00000219200.12	ENST00000552039.2	591	3	-10	0	0	0	multi-exon	FALSE	canonical	3	299	junction_1	681.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGTCTGTGCTTGAG	-15	True	NA	31	True	AATAAA	-19	NA	7012621	7014532	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7012758_7013665_7013743_7014144
H1_mix_00035441	chr17	+	1674	8	FSM	ENSG00000161939.19	ENST00000547863.5	1662	8	-12	0	-12	0	multi-exon	FALSE	canonical	3	299	junction_1	408.481058936891	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCGTGCTGTCTGCTTAA	11	True	NA	30	True	AATAAA	-14	NA	7012647	7017520	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7012758_7013665_7013743_7014144_7014879_7015061_7015157_7015773_7015876_7016494_7016686_7016909_7017015_7017260
H1_mix_00035442	chr17	+	900	7	FSM	ENSG00000161939.19	ENST00000547302.3	900	7	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_2	495.304760279523	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCGTGCTGTCTGCTTAA	90	False	NA	30	True	AATAAA	-14	NA	7013732	7017520	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7013743_7014144_7014278_7015061_7015157_7015773_7015876_7016494_7016686_7016909_7017015_7017256
H1_mix_00035444	chr17	+	764	5	FSM	ENSG00000258315.5	ENST00000546760.5	764	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	254.37410933505	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTCCCTCTCAGCTTCG	-4	True	NA	16	True	AAAACA	-5	NA	7014752	7017506	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7014879_7015061_7015157_7015773_7015876_7016494_7016686_7017256
H1_mix_00035445	chr17	+	877	6	FSM	ENSG00000258315.5	ENST00000439424.6	850	6	-29	2	0	-1	multi-exon	FALSE	canonical	3	494	junction_2	67.8987481475174	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTTCGTGCTGTCTGCTT	-4	True	NA	28	True	AATAAA	-12	NA	7014752	7017518	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7014879_7015061_7015157_7015773_7015876_7016494_7016686_7016909_7017015_7017260
H1_mix_00035446	chr17	+	776	5	FSM	ENSG00000258315.5	ENST00000552402.5	760	5	-16	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	239.804086704126	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCGTGCTGTCTGCTTA	-4	True	NA	29	True	AATAAA	-13	NA	7014752	7017519	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7014879_7015061_7015157_7016494_7016686_7016909_7017015_7017260
H1_mix_00035447	chr17	+	730	5	NIC	ENSG00000258315.5	novel	760	5	NA	NA	21	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_2	254.918001522058	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCGTGCTGTCTGCTTA	5	True	NA	29	True	AATAAA	-13	NA	7014802	7017519	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_7014879_7015061_7015157_7016494_7016686_7016909_7017015_7017256
H1_mix_00035448	chr17	+	659	6	NIC	ENSG00000258315.5	novel	850	6	NA	NA	28	-2	combination_of_known_junctions	FALSE	canonical	3	31	junction_4	234.991063659876	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCTTCGTGCTGTCTGCT	12	True	NA	27	True	AATAAA	-11	NA	7014809	7017517	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_7014879_7015061_7015157_7015773_7015876_7016494_7016526_7016909_7017015_7017260
H1_mix_00035449	chr17	+	3615	9	FSM	ENSG00000161940.11	ENST00000293805.10	3527	9	-88	0	-88	0	multi-exon	FALSE	canonical	3	26	junction_1	4.23526858652435	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTGTGTCCTGGGTTCT	5677	False	NA	12	True	AATAAA	-18	NA	7022961	7029644	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7023100_7023659_7023851_7024082_7024305_7024400_7024764_7025075_7025201_7026456_7026622_7026704_7026836_7026949_7027088_7027502
H1_mix_00035450	chr17	+	529	2	FSM	ENSG00000161940.11	ENST00000573503.1	529	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCGGCCGCCACCTATTTG	409	False	NA	NA	False	NA	NA	NA	7023476	7024237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7023851_7024082
H1_mix_00035451	chr17	+	1352	1	FSM	ENSG00000174327.7	ENST00000575844.1	968	1	-133	-251	-51	251	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCGACAGAGCAAGATTC	NA	False	NA	NA	False	NA	NA	NA	7035963	7037315	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7036000_7037300
H1_mix_00035452	chr17	+	2681	4	FSM	ENSG00000174327.7	ENST00000308027.7	1804	4	11	-888	11	888	multi-exon	FALSE	canonical	3	10	junction_1	0	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCCTAAAAATACAAAAATTA	18	True	NA	NA	False	NA	NA	NA	7036025	7041005	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7036582_7036726_7036871_7038151_7038890_7039762
H1_mix_00035454	chr17	+	944	7	FSM	ENSG00000072778.20	ENST00000579286.5	933	7	-11	0	4	0	multi-exon	FALSE	canonical	3	782	junction_1	46.2733424578582	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACCTGCCTCCCATTTCT	-5	True	NA	NA	False	NA	NA	NA	7219866	7222081	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7220047_7220121_7220198_7220463_7220677_7220765_7220831_7220923_7221059_7221537_7221683_7221951
H1_mix_00035457	chr17	+	2347	19	FSM	ENSG00000072778.20	ENST00000322910.9	2352	19	5	0	5	0	multi-exon	FALSE	canonical	2	451	junction_9	147.731456817204	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTTGCTCCTGTGTGAC	2739	False	NA	14	True	AATAAA	-16	NA	7219848	7225265	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7220198_7220463_7220530_7220603_7220677_7220765_7220831_7220923_7221059_7221537_7221683_7221951_7222082_7222176_7222303_7222666_7222866_7223132_7223238_7223643_7223731_7223812_7223876_7223967_7224070_7224145_7224244_7224320_7224394_7224479_7224553_7224641_7224715_7224808_7224885_7224956
H1_mix_00035459	chr17	+	2196	20	FSM	ENSG00000072778.20	ENST00000356839.10	2184	20	-12	0	0	0	multi-exon	FALSE	canonical	2	451	junction_10	144.149737476016	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGCTCCTGTGTGACG	3	True	NA	15	True	AATAAA	-17	NA	7219925	7225266	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7220047_7220121_7220198_7220463_7220530_7220603_7220677_7220765_7220831_7220923_7221059_7221537_7221683_7221951_7222082_7222176_7222303_7222666_7222866_7223132_7223238_7223643_7223731_7223812_7223876_7223967_7224070_7224145_7224244_7224320_7224394_7224479_7224553_7224641_7224715_7224808_7224885_7224956
H1_mix_00035460	chr17	+	2459	19	NIC	ENSG00000072778.20	novel	2184	20	NA	NA	0	0	intron_retention	FALSE	canonical	2	125	junction_15	202.509114259148	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGCTCCTGTGTGACG	3	True	NA	15	True	AATAAA	-17	NA	7219925	7225266	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_7220047_7220121_7220198_7220463_7220530_7220603_7220677_7220765_7220831_7220923_7221059_7221537_7221683_7221951_7222082_7222176_7222303_7222666_7223238_7223643_7223731_7223812_7223876_7223967_7224070_7224145_7224244_7224320_7224394_7224483_7224553_7224641_7224715_7224808_7224885_7224956
H1_mix_00035465	chr17	+	1015	10	FSM	ENSG00000072778.20	ENST00000583858.5	1015	10	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_5	296.490959202619	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCTCAAGAGCACTTACT	2277	False	NA	-38	True	NA	NA	NA	7222759	7225213	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7222866_7223132_7223238_7223643_7223731_7223812_7223876_7223967_7224070_7224320_7224394_7224479_7224553_7224641_7224715_7224808_7224885_7224956
H1_mix_00035466	chr17	+	1732	1	FSM	ENSG00000072778.20	ENST00000578711.1	1732	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCGCAAATAATAAAAATTTC	536	False	NA	-15	True	NA	NA	NA	7223504	7225236	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7223500_7225200
H1_mix_00035469	chr17	+	269	1	FSM	ENSG00000279641.1	ENST00000624722.1	1615	1	41	1305	41	-1305	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGCCACTACCTCAGCGGC	864	False	NA	NA	False	NA	NA	NA	7242240	7242509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7242200_7242500
H1_mix_00035470	chr17	+	2094	7	FSM	ENSG00000170291.16	ENST00000356683.7	2404	7	319	-9	2	0	multi-exon	FALSE	canonical	3	40	junction_1	237.844487007793	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTTGGTAGCTATTTAA	1079	False	NA	NA	False	AATAAA	-28	NA	7252057	7259940	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7252083_7252425_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587
H1_mix_00035471	chr17	+	1308	9	FSM	ENSG00000170291.16	ENST00000354429.7	1522	9	257	-43	2	0	multi-exon	FALSE	canonical	3	40	junction_1	222.044160866707	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTTGGTAGCTATTTAA	1079	False	NA	NA	False	AATAAA	-28	NA	7252057	7259940	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7252083_7252425_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587_7258684_7258825_7258927_7259570
H1_mix_00035472	chr17	+	2189	7	ISM	ENSG00000170291.16	ENST00000396627.7	1389	9	-23	9	-6	0	intron_retention	FALSE	canonical	3	19	junction_1	243.109543210463	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGAAGTACTTTGGTA	-4	True	NA	NA	False	AATAAA	-19	NA	7252208	7259931	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_7252338_7252425_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587
H1_mix_00035473	chr17	+	1412	9	FSM	ENSG00000170291.16	ENST00000396627.7	1389	9	-23	0	-6	0	multi-exon	FALSE	canonical	3	19	junction_1	225.729373365541	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTTGGTAGCTATTTAA	-4	True	NA	NA	False	AATAAA	-28	NA	7252208	7259940	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7252338_7252425_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587_7258684_7258825_7258927_7259570
H1_mix_00035474	chr17	+	1423	8	FSM	ENSG00000170291.16	ENST00000396628.7	1491	8	71	-3	0	0	multi-exon	FALSE	canonical	3	201	junction_6	202.846679810649	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTTGGTAGCTATTTAA	7	True	NA	NA	False	AATAAA	-28	NA	7252285	7259940	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587_7258684_7258825_7258927_7259570
H1_mix_00035475	chr17	+	2209	6	FSM	ENSG00000170291.16	ENST00000574993.6	2209	6	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_4	194.8790394065	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTTGGTAGCTATTTAA	7	True	NA	NA	False	AATAAA	-28	NA	7252285	7259940	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587
H1_mix_00035476	chr17	+	687	4	FSM	ENSG00000170291.16	ENST00000573657.6	687	4	0	0	0	0	multi-exon	FALSE	canonical	3	547	junction_1	57.567351858497	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTTTTTCATTTTTTTG	97	False	NA	32	True	AATAAA	-20	NA	7252375	7254906	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7252597_7252769_7252831_7252917_7252999_7254582
H1_mix_00035477	chr17	+	1083	7	FSM	ENSG00000170291.16	ENST00000570322.6	1083	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	245.664687916047	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTTGGTAGCTATTTAA	-14	True	NA	NA	False	AATAAA	-28	NA	7252524	7259940	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587_7258684_7259570
H1_mix_00035478	chr17	+	1872	10	FSM	ENSG00000181856.15	ENST00000571308.5	1768	10	-51	-53	-33	37	multi-exon	FALSE	canonical	3	10	junction_5	3.64471543707927	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGATGGTGAAGAGGGCGAA	NA	False	NA	45	True	NA	NA	NA	7281684	7286204	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7281968_7283244_7283362_7283472_7283646_7283737_7283863_7283973_7284090_7284216_7284380_7284484_7284673_7284834_7284940_7285087_7285190_7285704
H1_mix_00035479	chr17	+	3654	11	FSM	ENSG00000181856.15	ENST00000317370.13	3375	11	-49	-230	-49	230	multi-exon	FALSE	canonical	2	5	junction_10	4.73392015141785	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAGGGAAGAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	7281668	7288487	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7281968_7283244_7283362_7283472_7283646_7283737_7283863_7283973_7284090_7284216_7284380_7284484_7284673_7284834_7284940_7285087_7285190_7285704_7285909_7286425
H1_mix_00035480	chr17	+	1280	6	FSM	ENSG00000132507.18	ENST00000336452.11	1256	6	-24	0	-24	0	multi-exon	FALSE	canonical	3	78	junction_1	4199.86728361742	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCTGCTTATTTGAATT	NA	False	NA	-42	True	AATAAA	-28	NA	7306974	7312463	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7307116_7309614_7309801_7311017_7311123_7311349_7311482_7311577_7311652_7311821
H1_mix_00035481	chr17	+	1439	7	FSM	ENSG00000132507.18	ENST00000576930.5	1439	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4945.42534121743	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAACTCAGCTGCTTA	2	True	NA	38	True	AATAAA	-20	NA	7307539	7312455	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7307753_7308480_7308576_7309614_7309801_7311017_7311123_7311349_7311482_7311577_7311652_7311821
H1_mix_00035482	chr17	+	811	5	FSM	ENSG00000132507.18	ENST00000572815.5	811	5	0	0	0	0	multi-exon	FALSE	canonical	3	9070	junction_1	681.213072393653	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCGAGCCTGGCCTGGCT	-8	True	NA	NA	False	NA	NA	NA	7307581	7311868	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7307753_7309614_7309801_7311017_7311123_7311349_7311652_7311821
H1_mix_00035483	chr17	+	1109	6	FSM	ENSG00000132507.18	ENST00000573542.5	1089	6	-20	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	4200.26715340822	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGACTGGGGACCAGCCC	-8	True	NA	NA	False	NA	NA	NA	7307581	7312244	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7307753_7309596_7309801_7311017_7311123_7311349_7311482_7311577_7311652_7311821
H1_mix_00035484	chr17	+	1264	6	FSM	ENSG00000132507.18	ENST00000336458.13	1264	6	0	0	0	0	multi-exon	FALSE	canonical	3	9070	junction_1	611.167603853477	1353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCTGCTTATTTGAATT	-6	True	NA	-42	True	AATAAA	-28	NA	7307627	7312463	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7307753_7309614_7309801_7311017_7311123_7311349_7311482_7311577_7311652_7311821
H1_mix_00035486	chr17	+	1271	6	FSM	ENSG00000132507.18	ENST00000419711.6	1271	6	0	0	0	0	multi-exon	FALSE	canonical	3	1515	junction_1	3625.28407714485	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAACTCAGCTGCTTA	-18	True	NA	38	True	AATAAA	-20	NA	7307973	7312455	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7308114_7309614_7309801_7311017_7311123_7311349_7311482_7311577_7311652_7311821
H1_mix_00035487	chr17	+	1336	6	FSM	ENSG00000132507.18	ENST00000416016.2	1336	6	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	4162.27963500772	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAACTCAGCTGCTTA	12	True	NA	38	True	AATAAA	-20	NA	7308370	7312455	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7308576_7309614_7309801_7311017_7311123_7311349_7311482_7311577_7311652_7311821
H1_mix_00035488	chr17	+	2517	22	FSM	ENSG00000072818.12	ENST00000158762.8	2511	22	-6	0	-6	0	multi-exon	TRUE	canonical	3	78	junction_2	11.1948319790227	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGGTTCACTTCTTGG	-20	True	NA	21	True	ATTAAA	-21	NA	7336522	7351477	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7336788_7337311_7337370_7341947_7342068_7342274_7342329_7342415_7342475_7343378_7343563_7343705_7343751_7343860_7343957_7344048_7344124_7344538_7344649_7346243_7346296_7346390_7346492_7346807_7346932_7347030_7347243_7347921_7347992_7348126_7348222_7348305_7348476_7348994_7349168_7349944_7350055_7350126_7350238_7350949_7351000_7351294
H1_mix_00035489	chr17	+	778	5	FSM	ENSG00000072818.12	ENST00000576628.1	761	5	-17	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	9.16515138991168	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTAGCCGGGCATGGT	37	True	NA	NA	False	ACTAAA	-14	NA	7336579	7342753	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7336788_7337311_7337370_7341947_7342068_7342274_7342329_7342415
H1_mix_00035493	chr17	+	3128	1	FSM	ENSG00000213859.8	ENST00000576980.2	3051	1	-72	-5	-72	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGAAGGCTGTTGAGGG	816	False	NA	13	True	AATAAA	-21	NA	7351816	7354944	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7351800_7354900
H1_mix_00035494	chr17	+	2754	13	NNC	ENSG00000174292.13	novel	253	3	NA	NA	-10879	-53	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	8.92873015731925	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCATACCAACTGCTTCT	1192	False	NA	-26	True	NA	NA	NA	7369654	7389684	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_7369732_7382835_7383090_7383249_7383321_7383424_7383617_7383708_7383865_7383969_7384254_7384483_7384755_7386560_7386656_7386989_7387155_7387377_7387458_7388405_7388705_7388787_7388884_7388970
H1_mix_00035497	chr17	+	5746	8	FSM	ENSG00000169992.10	ENST00000575301.5	4374	8	-196	-1176	-196	0	multi-exon	FALSE	canonical	2	7	junction_1	5.823947745897	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGTGCCTGCTCTGTTGT	23	False	NA	27	True	TATAAA	-13	NA	7404677	7419860	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7405611_7408011_7408713_7412156_7412208_7414343_7414494_7414662_7414849_7414955_7415149_7415510_7416108_7416925
H1_mix_00035499	chr17	+	1991	3	FSM	ENSG00000181284.3	ENST00000323206.2	1981	3	-10	0	-10	0	multi-exon	FALSE	canonical	3	13	junction_1	43.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCATTCCAGCCTCGCTAT	-32	True	NA	NA	False	NA	NA	NA	7435424	7437679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7435697_7435852_7436086_7436193
H1_mix_00035500	chr17	+	1962	2	FSM	ENSG00000181284.3	ENST00000396568.1	1962	2	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAAAGTGCCTCTGTGGG	-3	True	NA	25	True	ATTAAA	-17	NA	7435453	7437523	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7436086_7436193
H1_mix_00035501	chr17	+	2473	5	FSM	ENSG00000161958.11	ENST00000575235.5	928	5	26	-1571	26	0	multi-exon	FALSE	canonical	3	15	junction_1	18.952242611364	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTTCTCAATTAAAGACG	7	True	NA	-12	True	NA	NA	NA	7438298	7444902	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7438531_7441470_7441582_7441775_7441880_7442593_7442793_7443075
H1_mix_00035502	chr17	+	4036	4	NNC	ENSG00000161958.11	novel	2578	5	NA	NA	-17	0	intron_retention	FALSE	canonical	1	2	junction_1	27.6445694888204	1117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTTCTCAATTAAAGACG	2038	False	NA	-12	True	NA	NA	NA	7438255	7444902	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_7439768_7441470_7441582_7441775_7441880_7442593
H1_mix_00035503	chr17	+	2584	5	FSM	ENSG00000161958.11	ENST00000293829.9	2578	5	-6	0	-6	0	multi-exon	FALSE	canonical	3	12	junction_1	20.0810856280232	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGTCTGTCATCTGTCG	-12	True	NA	23	True	ATTAAA	-20	NA	7439505	7444937	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7439814_7441470_7441582_7441775_7441880_7442593_7442793_7443075
H1_mix_00035504	chr17	+	5201	3	FSM	ENSG00000272884.1	ENST00000575331.1	5553	3	0	352	0	-352	multi-exon	FALSE	canonical	3	55	junction_2	5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGGTGAAGGACGGACCT	-12	True	NA	NA	False	NA	NA	NA	7439505	7445614	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7441582_7441775_7441880_7442593
H1_mix_00035505	chr17	+	2315	5	FSM	ENSG00000161958.11	ENST00000575082.5	2315	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	17.1245437895437	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTTCTCAATTAAAGACG	-4	True	NA	-12	True	NA	NA	NA	7440742	7444902	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7440817_7441470_7441582_7441775_7441880_7442593_7442793_7443075
H1_mix_00035506	chr17	+	2560	11	FSM	ENSG00000170175.11	ENST00000306071.7	2560	11	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_2	32.5699247773156	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGCATTGGTAATGAGAA	-25	True	NA	14	True	ATTAAA	-18	NA	7445060	7457710	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7445186_7445269_7445410_7446068_7446114_7446832_7446943_7447042_7447152_7447502_7447651_7448578_7448789_7454296_7454521_7455283_7455457_7455793_7455942_7456582
H1_mix_00035508	chr17	+	2422	10	FSM	ENSG00000170175.11	ENST00000536404.6	1623	10	-15	-784	-15	0	multi-exon	FALSE	canonical	3	81	junction_8	16.7994708911389	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGCATTGGTAATGAGAA	-29	True	NA	14	True	ATTAAA	-18	NA	7445487	7457710	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7445615_7446068_7446114_7446832_7446943_7447042_7447152_7447502_7447651_7448578_7448789_7454296_7454521_7455283_7455457_7455793_7455942_7456582
H1_mix_00035510	chr17	+	1495	2	FSM	ENSG00000170175.11	ENST00000575379.1	1095	2	0	-400	0	19	multi-exon	FALSE	canonical	3	110	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAAGCGTTTTGAAGG	16	False	NA	33	True	ATTAAA	-37	NA	7455593	7457729	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7455942_7456582
H1_mix_00035511	chr17	+	6751	29	FSM	ENSG00000181222.19	ENST00000617998.6	6751	29	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	171.558265672069	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTACATCGAGTGCTTC	0	True	NA	98	True	AATAAA	-22	NA	7484365	7514616	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7484858_7495940_7496074_7496209_7496347_7496439_7496614_7496763_7497046_7497355_7497518_7497649_7497871_7498077_7498211_7499038_7499164_7499280_7499492_7500638_7500849_7500939_7501109_7501288_7501384_7501525_7501730_7501899_7502123_7502517_7502702_7503120_7503293_7503384_7503491_7503585_7503792_7508250_7508476_7508943_7509191_7509531_7509633_7511214_7511320_7511405_7511589_7511810_7512015_7512157_7512345_7512476_7512591_7512773_7512924_7513020
H1_mix_00035512	chr17	+	2083	10	FSM	ENSG00000181222.19	ENST00000572844.1	2083	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	225.962632112283	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTTGTTCAAATTTTATT	2	True	NA	NA	False	GATAAA	-16	NA	7484619	7499758	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7484858_7495940_7496074_7496209_7496347_7496439_7496614_7496763_7497046_7497355_7497518_7497649_7497871_7498077_7498211_7499038_7499164_7499280
H1_mix_00035517	chr17	+	1380	7	FSM	ENSG00000239697.11	ENST00000293825.11	1377	7	-3	0	-3	0	multi-exon	FALSE	canonical	3	29	junction_1	5.88075958812578	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCATAGTCTCTCTCTT	-7	True	NA	NA	False	ATTAAA	-6	NA	7549054	7557881	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7549313_7549473_7549522_7550119_7550196_7550798_7550853_7550942_7550979_7556777_7556903_7557098
H1_mix_00035518	chr17	+	4586	12	NIC	ENSG00000248871.1	novel	1816	11	NA	NA	-323	248	intron_retention	TRUE	canonical	3	11	junction_8	11.766319772628	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGCGCCGGCGTCCTCGG	NA	False	NA	NA	False	NA	NA	NA	7548775	7561849	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_7549313_7549473_7549522_7550119_7550196_7550798_7550853_7550942_7550979_7556777_7556903_7557098_7559298_7559623_7559703_7559845_7559894_7560048_7560168_7560349_7560489_7560723
H1_mix_00035519	chr17	+	1811	6	FSM	ENSG00000161955.17	ENST00000338784.9	1811	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	5.41848687365763	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGCTCCATTTCCCCCA	8	True	NA	8	True	AATAAA	-16	NA	7558749	7561601	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7559298_7559623_7559703_7559845_7559894_7560048_7560168_7560349_7560489_7560723
H1_mix_00035520	chr17	+	2567	11	FSM	ENSG00000161956.13	ENST00000321337.12	2567	11	0	0	0	0	multi-exon	FALSE	canonical	3	534	junction_10	34.1058645983356	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGTCTTCCTTAAGGG	-10	True	NA	28	True	AATAAA	-22	NA	7561918	7571969	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7562264_7563065_7563792_7564624_7564865_7564958_7565071_7565439_7565588_7565716_7565765_7566926_7567005_7570355_7570494_7570680_7570765_7570882_7570934_7571372
H1_mix_00035523	chr17	+	1332	11	FSM	ENSG00000161960.16	ENST00000577269.5	1319	11	-13	0	0	0	multi-exon	FALSE	canonical	3	34	junction_9	3555.16880611878	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTAGACACCCTTTTCT	-2	True	NA	-33	True	AATAAA	-35	NA	7572823	7578641	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7572865_7574259_7574309_7574545_7574679_7575118_7575259_7576523_7576693_7577055_7577166_7577343_7577488_7577568_7577707_7577826_7577917_7578226_7578245_7578341
H1_mix_00035524	chr17	+	1663	10	FSM	ENSG00000161960.16	ENST00000582746.5	1645	10	-18	0	0	0	multi-exon	FALSE	canonical	3	208	junction_9	3608.75604914245	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTGGAAACTGCCTGTT	-2	True	NA	4	True	AATAAA	-2	NA	7572823	7578990	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7572865_7574259_7574309_7574545_7574679_7575118_7575259_7576523_7576693_7577055_7577166_7577343_7577488_7577568_7577707_7577826_7577917_7578341
H1_mix_00035525	chr17	+	1759	11	FSM	ENSG00000161960.16	ENST00000293831.13	1758	11	-1	0	0	0	multi-exon	FALSE	canonical	3	9200	junction_1	996.406187254977	1293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGGCTTCTCATTTCT	-2	True	NA	20	True	AATAAA	-18	NA	7572823	7579006	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7572865_7574259_7574309_7574545_7574679_7575118_7575259_7576523_7576693_7577055_7577166_7577343_7577488_7577568_7577707_7577826_7577917_7578164_7578245_7578341
H1_mix_00035526	chr17	+	1440	1	FSM	ENSG00000161960.16	ENST00000584798.1	1440	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGCTGCGTGATGAGGC	31	False	NA	NA	False	AAAAAG	-11	NA	7574745	7576185	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7574700_7576200
H1_mix_00035527	chr17	+	1705	6	FSM	ENSG00000129226.14	ENST00000250092.11	1705	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	1.83303027798234	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCTTTCTATGCCTTCC	16	True	NA	NA	False	ATTAAA	-20	NA	7579637	7582111	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7579727_7579809_7580328_7580465_7580586_7580710_7580784_7580895_7581067_7581377
H1_mix_00035528	chr17	+	1020	7	FSM	ENSG00000129255.16	ENST00000571822.5	1020	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	155.326537762654	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGTACATGTACTATTAA	290	False	NA	NA	False	NA	NA	NA	7583820	7587790	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7583966_7585731_7585798_7585950_7586079_7586691_7586778_7586898_7587018_7587160_7587272_7587425
H1_mix_00035529	chr17	+	929	7	FSM	ENSG00000129255.16	ENST00000572719.5	917	7	-12	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	162.025460962159	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTAGTGGAAACAAATGG	-5	True	NA	NA	False	NA	NA	NA	7583847	7587685	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7583966_7585731_7585798_7585945_7586079_7586655_7586778_7586898_7587018_7587160_7587272_7587425
H1_mix_00035530	chr17	+	1527	6	FSM	ENSG00000129255.16	ENST00000572836.5	1523	6	-4	0	0	0	multi-exon	FALSE	canonical	3	432	junction_5	19.6631635298087	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTGAATAATACAAAACTGT	-5	True	NA	-23	True	AATAAA	-14	NA	7583847	7588176	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7583966_7585731_7585798_7585945_7586079_7586691_7586778_7586898_7587272_7587425
H1_mix_00035531	chr17	+	1420	7	FSM	ENSG00000129255.16	ENST00000250124.11	1416	7	-4	0	0	0	multi-exon	FALSE	canonical	3	405	junction_5	26.5795451846382	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAATTGTATGTTGTGCGG	-5	True	NA	13	True	AATACA	-24	NA	7583847	7588212	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7583966_7585731_7585798_7585945_7586079_7586691_7586778_7586898_7587018_7587160_7587272_7587425
H1_mix_00035532	chr17	+	3342	7	FSM	ENSG00000129244.9	ENST00000250111.9	3341	7	-1	0	-1	0	multi-exon	FALSE	canonical	3	280	junction_1	19.8221256848671	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGTGTGGGTTGTTC	0	True	NA	16	True	AATAAA	-41	NA	7650924	7657770	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7651631_7653373_7653503_7653840_7653946_7654051_7654258_7654627_7654685_7655526_7655626_7655730
H1_mix_00035533	chr17	+	4011	10	FSM	ENSG00000141499.17	ENST00000316024.9	4011	10	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_2	18.3491514251938	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGAGTCTTCGTGTCTGTT	NA	False	NA	14	True	TATAAA	-16	NA	7686300	7703502	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7689080_7689223_7689323_7689589_7689702_7700740_7700830_7701458_7701550_7701656_7701790_7702343_7702553_7702742_7702847_7702992_7703128_7703242
H1_mix_00035534	chr17	+	1749	11	FSM	ENSG00000141499.17	ENST00000396463.7	1749	11	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_1	20.2605528058837	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGAGTCTTCGTGTCTGTT	16	True	NA	14	True	TATAAA	-16	NA	7688476	7703502	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7688562_7688647_7689080_7689223_7689323_7689589_7689702_7700740_7700830_7701458_7701550_7701656_7701790_7702343_7702553_7702742_7702847_7702992_7703128_7703242
H1_mix_00035535	chr17	+	507	2	FSM	ENSG00000141499.17	ENST00000498114.1	507	2	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGAGTCTTCGTGTCTGTT	NA	False	NA	14	True	TATAAA	-16	NA	7702880	7703502	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7703128_7703242
H1_mix_00035536	chr17	+	3216	5	FSM	ENSG00000108947.5	ENST00000226091.3	3216	5	0	0	0	0	multi-exon	TRUE	canonical	3	33	junction_2	10.5475115548645	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGAAGGCTGGAGAATGAC	-5	True	NA	16	True	AATAAA	-23	NA	7705201	7711372	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7705721_7707957_7708251_7708434_7708528_7708634_7708740_7709166
H1_mix_00035537	chr17	+	5229	14	ISM	ENSG00000132510.11	ENST00000448097.7	6728	24	12963	-6	2265	6	3prime_fragment	FALSE	canonical	0	0	junction_1	6.21888705581776	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGCTAACGGCTGGTGGTA	48	False	NA	24	True	AATAAA	-20	NA	7847179	7854802	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_7847453_7847545_7849729_7849820_7849948_7850071_7850178_7851020_7851227_7851329_7851395_7851477_7851550_7851647_7851797_7851950_7852066_7852148_7852337_7852494_7852637_7852999_7853127_7853209_7853381_7853497
H1_mix_00035538	chr17	+	874	2	FSM	ENSG00000167874.7	ENST00000301599.7	874	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCGCTCTGCGAACAGAGGC	1	True	NA	9	True	AATAAA	-17	NA	7855065	7856099	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7855285_7855444
H1_mix_00035539	chr17	+	533	2	FSM	ENSG00000167874.7	ENST00000574668.1	510	2	12	-35	12	-3	multi-exon	FALSE	canonical	3	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACGCGCTCTGCGAACAGA	13	False	NA	6	True	AATAAA	-14	NA	7855077	7856096	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7855285_7855770
H1_mix_00035541	chr17	+	3489	4	FSM	ENSG00000182224.12	ENST00000332439.5	3489	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	2.62466929133727	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAAGTGAACTCATCCGT	-31	True	NA	10	True	AATAAA	-18	NA	7858002	7862282	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7858295_7858402_7858480_7858605_7858825_7859381
H1_mix_00035544	chr17	+	7141	1	FSM	ENSG00000280046.1	ENST00000624171.1	7141	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	909	False	NA	NA	False	NA	NA	NA	7858942	7866083	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7858900_7866100
H1_mix_00035545	chr17	+	7333	40	NIC	ENSG00000170004.18	novel	7361	40	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_6	20.9474782296452	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCTCTGTTATTTTTT	8	True	NA	13	True	TATAAA	-16	NA	7884811	7912755	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_7885084_7889663_7889777_7890570_7890742_7890939_7891065_7893285_7893570_7893804_7893936_7894126_7894266_7894414_7894609_7894916_7895151_7895338_7895543_7897082_7897295_7897970_7898103_7898495_7898596_7899010_7899203_7899342_7899544_7899895_7900034_7900289_7900412_7900557_7900732_7900851_7900994_7901243_7901376_7902609_7902728_7902936_7903062_7903271_7903504_7903824_7903992_7904441_7904620_7905099_7905166_7905620_7905707_7905855_7905990_7906552_7906698_7906868_7907032_7907125_7907248_7907352_7907489_7907600_7907703_7907893_7908020_7908401_7908511_7908696_7908830_7909142_7909339_7910427_7910592_7910846_7910974_7911463
H1_mix_00035549	chr17	+	2559	3	FSM	ENSG00000170004.18	ENST00000481999.1	2515	3	-64	20	-64	0	multi-exon	FALSE	canonical	3	70	junction_1	8.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATACTTTCCTTTCTGTGT	3372	False	NA	-2	True	TATAAA	-1	NA	7909436	7912740	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7910592_7910846_7910974_7911463
H1_mix_00035551	chr17	+	3996	19	FSM	ENSG00000170037.14	ENST00000563694.6	3996	19	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_2	23.1879731491442	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAGTAAGTTATTGTATA	6	True	NA	NA	False	AAAACA	-43	NA	7932205	7949920	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7933350_7934137_7934223_7934464_7934547_7934988_7935146_7936365_7936483_7936700_7936818_7937163_7937263_7939512_7939750_7940095_7940243_7943390_7943525_7944122_7944249_7944475_7944639_7945727_7945987_7947570_7947723_7947915_7947980_7948156_7948328_7948486_7948620_7949084_7949158_7949384
H1_mix_00035552	chr17	+	3504	19	FSM	ENSG00000170037.14	ENST00000565740.5	2783	19	-874	153	0	0	multi-exon	FALSE	canonical	3	65	junction_17	29.9281031477889	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGACTGAAAAACCTCCCG	6	True	NA	NA	False	NA	NA	NA	7932205	7949425	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7933350_7934137_7934223_7934464_7934547_7934988_7935146_7936365_7936483_7936700_7936818_7937163_7937263_7939512_7939750_7940095_7940243_7943390_7943525_7944122_7944249_7944475_7944639_7945727_7945987_7947570_7947723_7947915_7947980_7948156_7948328_7948486_7948620_7949081_7949158_7949384
H1_mix_00035555	chr17	+	6247	28	FSM	ENSG00000178921.14	ENST00000314666.11	5369	28	-878	0	793	0	multi-exon	FALSE	canonical	3	389	junction_1	49.1575948944054	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCATTGCCTGGGGTCCAC	251	False	NA	14	True	AATAAA	-18	NA	8248410	8270486	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_8249340_8253858_8254080_8254165_8254302_8255026_8255133_8255501_8255692_8255804_8255911_8256266_8256408_8256523_8256649_8256834_8256964_8257806_8257939_8258070_8258200_8262919_8262994_8263108_8263266_8263574_8263637_8263774_8263937_8264211_8264338_8264469_8264602_8264894_8265126_8265287_8265469_8265555_8265640_8265861_8266018_8266233_8266354_8266752_8266899_8267027_8267236_8267371_8267464_8267550_8267666_8268532_8268857_8268953
H1_mix_00035559	chr17	+	765	4	FSM	ENSG00000178921.14	ENST00000578979.5	765	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	203.897577774289	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGGTGAGGGAGTGTGT	NA	False	NA	NA	False	NA	NA	NA	8265972	8267229	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_8266018_8266233_8266354_8266500_8266899_8267027
H1_mix_00035560	chr17	+	559	2	FSM	ENSG00000178921.14	ENST00000580251.1	559	2	0	0	0	0	multi-exon	FALSE	canonical	3	451	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGGTGAGGGAGTGTGT	NA	False	NA	NA	False	NA	NA	NA	8266271	8267229	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_8266354_8266752
H1_mix_00035563	chr17	+	1077	4	FSM	ENSG00000108961.14	ENST00000407006.8	1074	4	-3	0	-3	0	multi-exon	FALSE	canonical	3	450	junction_3	33.4896335536171	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCTGTGCCTTTGAATC	-22	True	NA	NA	False	AATAAA	-20	NA	8288650	8290090	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_8288866_8288955_8289073_8289257_8289415_8289502
H1_mix_00035564	chr17	+	769	4	FSM	ENSG00000108961.14	ENST00000580434.5	749	4	-20	0	-3	0	multi-exon	FALSE	canonical	3	38	junction_3	218.037203757116	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTGCCTTTGAATCTA	-22	True	NA	NA	False	AATAAA	-22	NA	8288650	8290092	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_8288866_8288955_8289073_8289257_8289415_8289812
H1_mix_00035571	chr17	+	3927	1	FSM	ENSG00000166579.16	ENST00000578172.1	3927	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGACGTTGCTTTATTCAG	6051	False	NA	22	True	AATAAA	-18	NA	8464235	8468162	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_8464200_8468200
H1_mix_00035576	chr17	+	1385	2	FSM	ENSG00000263400.8	ENST00000664973.1	1387	2	2	0	2	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGAGTTTTGGCATAG	NA	False	NA	3	True	AATAAA	-18	NA	10766678	10769071	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_10766857_10767864
H1_mix_00035578	chr17	+	1037	1	FSM	ENSG00000264727.1	ENST00000577346.1	2607	1	1573	-3	1573	3	mono-exon	FALSE	NA	NA	NA	NA	NA	323	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTAACCTATGTTTATGA	NA	False	NA	NA	False	ATTAAA	-18	NA	11289777	11290814	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_11289800_11290800
H1_mix_00035580	chr17	+	401	2	FSM	ENSG00000007174.18	ENST00000583192.1	712	2	3	308	3	-308	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCACTGGTGTCAACCA	NA	False	NA	NA	False	NA	NA	NA	11704202	11705185	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_11704443_11705024
H1_mix_00035582	chr17	+	1521	3	Antisense	novelGene_ENSG00000266368.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	46	junction_2	4.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGTGTTCTCTTCACA	NA	False	NA	19	True	AATAAA	-25	NA	11972094	11976912	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr17_+_11972336_11973569_11974438_11976500
H1_mix_00035583	chr17	+	1064	10	FSM	ENSG00000065559.15	ENST00000602375.5	1064	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	82.1044201152967	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAAAGGGCTGAGAGGA	22	True	NA	NA	False	NA	NA	NA	12020869	12141282	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_12021002_12054888_12054992_12095574_12095695_12107789_12107910_12110374_12110427_12113232_12113361_12125293_12125372_12129138_12129288_12139838_12139885_12141146
H1_mix_00035584	chr17	+	3584	10	FSM	ENSG00000065559.15	ENST00000602811.5	1136	10	0	-2448	0	0	multi-exon	FALSE	canonical	3	37	junction_1	77.0699537937955	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTTTGTAATTTGATTT	22	True	NA	15	True	AATAAA	-15	NA	12020869	12143730	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_12021002_12081355_12081531_12095574_12095695_12107789_12107910_12110374_12110427_12113232_12113361_12125293_12125372_12129138_12129288_12139838_12139885_12141146
H1_mix_00035585	chr17	+	3785	11	FSM	ENSG00000065559.15	ENST00000353533.10	3778	11	-7	0	0	0	multi-exon	FALSE	canonical	3	207	junction_3	32.8799330899562	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTCCTTTTGGAAGTGT	22	True	NA	37	True	ATTAAA	-29	NA	12020869	12143828	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_12021002_12054888_12054992_12081355_12081531_12095574_12095695_12107789_12107910_12110374_12110427_12113232_12113361_12125293_12125372_12129138_12129288_12139838_12139885_12141146
H1_mix_00035590	chr17	+	867	3	FSM	ENSG00000006695.12	ENST00000429152.6	875	3	2	6	2	-6	multi-exon	FALSE	canonical	3	272	junction_1	10.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTATTTCCTTGTCTTTA	-21	True	NA	NA	False	ATTAAA	-44	NA	14069497	14077316	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_14069649_14074322_14074457_14076734
H1_mix_00035591	chr17	+	2904	7	FSM	ENSG00000006695.12	ENST00000261643.8	2898	7	-6	0	2	0	multi-exon	FALSE	canonical	3	167	junction_3	45.6240677225908	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGAGTGTGTGTGACGTCA	-21	True	NA	14	True	AATAAA	-15	NA	14069497	14208677	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_14069649_14074322_14074457_14076734_14077057_14102117_14102243_14159876_14159948_14191988_14192222_14206809
H1_mix_00035593	chr17	+	3237	3	FSM	ENSG00000125430.9	ENST00000466596.5	2808	3	-43	-386	-41	126	multi-exon	FALSE	canonical	2	8	junction_2	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCATTCTGAGGGCAAGC	9	False	NA	NA	False	NA	NA	NA	14301039	14349530	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_14302073_14345027_14345703_14348001
H1_mix_00035594	chr17	+	5369	2	FSM	ENSG00000125430.9	ENST00000360954.3	5369	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGGGTACCTTTATGTT	-5	True	NA	4	True	AATAAA	-15	NA	14301080	14349404	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_14302073_14345027
H1_mix_00035596	chr17	+	5469	6	FSM	ENSG00000187607.16	ENST00000395894.6	5443	6	-31	5	-11	0	multi-exon	FALSE	canonical	3	79	junction_1	50.5276162113354	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTTTTGTAAATTGCT	NA	False	NA	5	True	AATAAA	-22	NA	15699707	15720782	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_15699778_15700047_15700367_15701151_15701241_15706386_15706502_15708154_15708248_15715999
H1_mix_00035598	chr17	+	546	6	FSM	ENSG00000187607.16	ENST00000580393.5	541	6	-5	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	86.3050404090051	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAGCAGAATCATGCAAA	-16	True	NA	NA	False	NA	NA	NA	15699738	15716109	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_15699778_15700207_15700367_15701151_15701241_15706386_15706502_15708154_15708248_15716058
H1_mix_00035599	chr17	+	5654	5	FSM	ENSG00000187607.16	ENST00000464847.6	5616	5	-38	0	0	0	multi-exon	FALSE	canonical	3	64	junction_4	60.6851505724423	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTAAATTGCTTTTAA	-16	True	NA	10	True	AATAAA	-27	NA	15699738	15720787	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_15700367_15701151_15701241_15706386_15706502_15708154_15708248_15716058
H1_mix_00035600	chr17	+	5297	6	FSM	ENSG00000187607.16	ENST00000583566.6	5284	6	-13	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	76.7765589226295	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTAAATTGCTTTTAA	-16	True	NA	10	True	AATAAA	-27	NA	15699738	15720787	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_15699778_15700134_15700367_15701151_15701241_15706386_15706502_15708154_15708248_15716058
H1_mix_00035601	chr17	+	706	6	ISM	ENSG00000255104.9	ENST00000585171.5	631	7	20	26587	8	-26587	5prime_fragment	FALSE	canonical	3	15	junction_2	79.500943390629	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGATTAGACACGTACTA	6	True	NA	10	True	AATAAA	-22	NA	15699760	15708424	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_15699778_15700047_15700169_15700272_15700367_15701151_15701241_15706386_15706502_15708154
H1_mix_00035602	chr17	+	2183	3	FSM	ENSG00000187607.16	ENST00000481540.1	427	3	-135	-1621	-135	107	multi-exon	FALSE	canonical	3	196	junction_2	7	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTACTTGGCTATTCAA	945	False	NA	NA	False	GATAAA	-18	NA	15701063	15710045	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_15701241_15706386_15706502_15708154
H1_mix_00035612	chr17	+	929	2	FSM	ENSG00000108474.17	ENST00000463810.2	888	2	-46	5	9	-5	multi-exon	FALSE	canonical	3	31	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGACCTCTTTTCCCATTT	-16	True	NA	9	True	AATAAA	-20	NA	16217199	16218214	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16217462_16217547
H1_mix_00035616	chr17	+	704	3	FSM	ENSG00000170315.14	ENST00000535788.1	704	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	3314	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATACTTGGTGTTTTGTC	-3	True	NA	23	True	AATAAA	-17	NA	16381090	16382739	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16381185_16381901_16382131_16382358
H1_mix_00035617	chr17	+	933	2	FSM	ENSG00000170315.14	ENST00000302182.8	933	2	0	0	0	0	multi-exon	FALSE	canonical	3	6628	junction_1	0	1063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATACTTGGTGTTTTGTCA	-3	True	NA	24	True	AATAAA	-18	NA	16381090	16382740	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16381185_16381901
H1_mix_00035618	chr17	+	1012	2	FSM	ENSG00000170315.14	ENST00000395839.5	1012	2	0	0	0	0	multi-exon	FALSE	canonical	3	730	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATACTTGGTGTTTTGTCA	196	False	NA	24	True	AATAAA	-18	NA	16381289	16382740	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16381463_16381901
H1_mix_00035619	chr17	+	1014	2	FSM	ENSG00000170315.14	ENST00000395837.1	1014	2	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	0	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATACTTGGTGTTTTGTCA	6	True	NA	24	True	AATAAA	-18	NA	16381340	16382740	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16381516_16381901
H1_mix_00035623	chr17	+	1055	5	FSM	ENSG00000175061.19	ENST00000654778.1	1035	5	-20	0	-2	0	multi-exon	FALSE	canonical	3	428	junction_4	814.961770575774	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	1	True	NA	-26	True	AATAAA	-20	NA	16438989	16442018	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16439061_16439326_16439415_16439527_16439704_16440184_16440254_16441367
H1_mix_00035624	chr17	+	1173	4	FSM	ENSG00000175061.19	ENST00000491009.6	1159	4	-14	0	-2	0	multi-exon	FALSE	canonical	3	2444	junction_1	397.256424323971	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	1	True	NA	-26	True	AATAAA	-20	NA	16438989	16442018	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16439061_16439326_16439415_16440184_16440254_16441073
H1_mix_00035625	chr17	+	1706	4	FSM	ENSG00000175061.19	ENST00000497774.6	1685	4	-21	0	-2	0	multi-exon	FALSE	canonical	3	2444	junction_1	427.564679967319	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	1	True	NA	-26	True	AATAAA	-20	NA	16438989	16442018	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16439061_16439326_16440254_16441073_16441131_16441367
H1_mix_00035629	chr17	+	1945	3	FSM	ENSG00000175061.19	ENST00000659884.1	1930	3	-15	0	0	0	multi-exon	FALSE	canonical	3	3350	junction_2	1	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTTGGGTGTCAATTCT	12	False	NA	-42	True	AATAAA	-4	NA	16439000	16442002	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16440254_16441073_16441131_16441367
H1_mix_00035631	chr17	+	1178	5	FSM	ENSG00000175061.19	ENST00000480811.6	1178	5	0	0	0	0	multi-exon	FALSE	canonical	3	777	junction_2	1051.04552113598	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	0	True	NA	-26	True	AATAAA	-20	NA	16439036	16442018	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16439061_16439326_16439704_16440184_16440254_16441073_16441131_16441367
H1_mix_00035633	chr17	+	1079	3	FSM	ENSG00000175061.19	ENST00000470491.7	1108	3	0	29	0	-3	multi-exon	FALSE	canonical	3	428	junction_2	1386.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGTCTTGGGTGTCAAT	0	True	NA	42	True	AATAAA	-1	NA	16439036	16441999	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16439415_16440184_16440254_16441367
H1_mix_00035634	chr17	+	794	4	FSM	ENSG00000175061.19	ENST00000658116.2	801	4	0	7	0	-5	multi-exon	FALSE	canonical	3	20	junction_1	1570.24867103554	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTCAATTCTTGAAAATGT	0	True	NA	-33	True	AATAAA	-13	NA	16439036	16442011	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16439061_16440184_16440254_16441073_16441131_16441367
H1_mix_00035635	chr17	+	876	5	FSM	ENSG00000175061.19	ENST00000666215.2	879	5	3	0	0	0	multi-exon	FALSE	canonical	3	198	junction_2	880.255751188256	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	0	True	NA	-26	True	AATAAA	-20	NA	16439036	16442018	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16439061_16439326_16439415_16439659_16439704_16440184_16440254_16441367
H1_mix_00035636	chr17	+	960	5	FSM	ENSG00000175061.19	ENST00000483140.7	965	5	0	5	0	5	multi-exon	FALSE	canonical	3	209	junction_2	877.879405157679	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATGTGTATTTGAAGAA	0	True	NA	-21	True	AATAAA	-25	NA	16439036	16442023	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16439061_16439326_16439415_16439580_16439704_16440184_16440254_16441367
H1_mix_00035637	chr17	+	1209	5	FSM	ENSG00000175061.19	ENST00000475953.6	1209	5	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_1	1446.31037039081	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	0	True	NA	-16	True	AATAAA	-30	NA	16439036	16442028	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16439415_16439659_16439704_16440184_16440254_16441073_16441131_16441367
H1_mix_00035638	chr17	+	1165	4	FSM	ENSG00000175061.19	ENST00000655540.1	1165	4	0	0	0	0	multi-exon	FALSE	canonical	3	3201	junction_1	70.7153920067383	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	0	True	NA	-16	True	AATAAA	-30	NA	16439036	16442028	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16439415_16440184_16440254_16441073_16441131_16441367
H1_mix_00035640	chr17	+	1016	5	FSM	ENSG00000175061.19	ENST00000481027.5	1016	5	0	0	0	0	multi-exon	FALSE	canonical	3	548	junction_1	1346.68618746165	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTACAATAAAGGATGGTC	2	True	NA	30	True	NA	NA	NA	16439320	16441987	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16439415_16439527_16439704_16440184_16440254_16441073_16441131_16441367
H1_mix_00035644	chr17	+	10960	23	FSM	ENSG00000133030.22	ENST00000395811.9	10960	23	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_22	37.7415088146103	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCTGTGTAATGAGATTT	10	False	NA	31	True	AATAAA	-22	NA	17042759	17192648	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_17042972_17075709_17075788_17078010_17078077_17126701_17126854_17131616_17131702_17136218_17136451_17137915_17138076_17142626_17142766_17143555_17143670_17146035_17146093_17147318_17147388_17150143_17150234_17154305_17154416_17158431_17159003_17161239_17161357_17171717_17171866_17172697_17172816_17173915_17174076_17175292_17175413_17176425_17176513_17177249_17177413_17180002_17180089_17184822
H1_mix_00035645	chr17	+	3846	24	FSM	ENSG00000133030.22	ENST00000341712.8	3846	24	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_8	27.5597992206272	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCGGCCCCTCTCCTTCC	99	False	NA	79	True	ATTAAA	-13	NA	17042848	17185560	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_17042972_17075709_17075788_17078010_17078077_17126701_17126854_17131616_17131702_17136218_17136451_17137915_17138076_17142626_17142766_17143555_17143670_17146035_17146093_17147318_17147388_17150143_17150234_17154305_17154416_17158431_17159003_17161239_17161357_17171717_17171866_17172697_17172816_17173915_17174076_17175292_17175413_17176425_17176513_17177249_17177413_17180002_17180089_17180606_17180670_17184822
H1_mix_00035648	chr17	+	1785	7	NNC	ENSG00000205309.14	novel	1408	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	44.360893689024	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGGCCTGCCCTAA	9	True	NA	16	True	AATAAA	-22	NA	17303365	17347661	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_17303818_17304363_17304478_17306542_17306644_17323184_17323246_17344793_17344909_17345227_17345313_17346804
H1_mix_00035650	chr17	+	1408	6	FSM	ENSG00000205309.14	ENST00000483704.5	1408	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	40.9458178572611	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGGCCTGCCCTAAGA	260	False	NA	18	True	AATAAA	-24	NA	17303677	17347663	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_17303818_17304363_17304478_17306542_17306644_17323184_17323246_17344793_17344927_17346804
H1_mix_00035651	chr17	+	597	1	FSM	ENSG00000141026.6	ENST00000585041.1	679	1	-25	107	-13	-107	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTCACCTTTAATGTT	-28	True	NA	2	True	ATTAAA	-16	NA	17476980	17477577	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_17477000_17477600
H1_mix_00035654	chr17	+	489	2	FSM	ENSG00000108557.20	ENST00000583166.1	489	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGTCTGCGGAGCCAT	3240	False	NA	NA	False	CATAAA	-12	NA	17798383	17804114	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_17798514_17803755
H1_mix_00035658	chr17	+	1912	13	FSM	ENSG00000108591.10	ENST00000395726.8	1897	13	-15	0	-11	0	multi-exon	FALSE	canonical	3	12	junction_12	85.08312928477	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAAACGGTTCCTGTTCA	-46	True	NA	14	True	AATAAA	-4	NA	18087909	18107959	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18088088_18093812_18093974_18098269_18098360_18099016_18099078_18099632_18099724_18100362_18100436_18100568_18100660_18101492_18101591_18101920_18101998_18103800_18103890_18104622_18104682_18106432_18106471_18107153
H1_mix_00035659	chr17	+	1907	13	FSM	ENSG00000108591.10	ENST00000225729.8	1900	13	-7	0	0	0	multi-exon	FALSE	canonical	3	283	junction_8	19.6701974231747	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGTTCAGACTGAGAAC	-15	True	NA	24	True	AATAAA	-14	NA	18087940	18107969	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18088088_18093812_18093974_18098269_18098360_18099016_18099078_18099632_18099724_18100362_18100436_18100568_18100660_18101492_18101591_18101920_18101998_18103800_18103890_18104622_18104682_18106432_18106487_18107153
H1_mix_00035660	chr17	+	891	6	FSM	ENSG00000108591.10	ENST00000583355.1	891	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	117.69214077414	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGGTCCCTGGAGGCT	51	False	NA	NA	False	NA	NA	NA	18088006	18107600	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18088088_18093812_18093974_18103800_18103890_18104622_18104682_18106432_18106487_18107153
H1_mix_00035661	chr17	+	5342	9	FSM	ENSG00000108591.10	ENST00000582528.5	5342	9	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_4	16.3051947243816	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGTTCAGACTGAGAACA	310	False	NA	25	True	AATAAA	-15	NA	18095721	18107970	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18098360_18099016_18100436_18100568_18100660_18101492_18101591_18101920_18101998_18103800_18103890_18104622_18104682_18106432_18106487_18107153
H1_mix_00035662	chr17	+	964	3	FSM	ENSG00000108591.10	ENST00000497744.1	964	3	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_2	5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTTCTGAAATAAAGGATT	9148	False	NA	-4	True	NA	NA	NA	18104559	18107941	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18104682_18106432_18106487_18107153
H1_mix_00035663	chr17	+	927	4	FSM	ENSG00000091536.20	ENST00000473013.1	2243	4	44	1272	44	554	multi-exon	FALSE	canonical	2	4	junction_1	1.24721912892465	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGCCAGGAAGACTGA	NA	False	NA	NA	False	AATGAA	-29	NA	18160790	18163838	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18161448_18162584_18162680_18163243_18163322_18163741
H1_mix_00035665	chr17	+	4212	23	FSM	ENSG00000131899.12	ENST00000316843.9	4212	23	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_22	2.265898832839	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCATCCACATCTGCTTTA	9	True	NA	48	True	AATAAA	-21	NA	18225634	18244875	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18225764_18229940_18230039_18232494_18232577_18232671_18232803_18233777_18233937_18234012_18234176_18234272_18234409_18234648_18234704_18234838_18234994_18235088_18235313_18235469_18235538_18236606_18236761_18236834_18236940_18237480_18237774_18238066_18238215_18238455_18238610_18240577_18240874_18241450_18241716_18241884_18242000_18242165_18242279_18242507_18242629_18242742_18242823_18243907
H1_mix_00035666	chr17	+	3369	4	FSM	ENSG00000177427.13	ENST00000323019.9	3236	4	-143	10	-78	-10	multi-exon	FALSE	canonical	3	54	junction_3	3.85861230093008	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAATAAATTAGCATCTC	NA	False	NA	NA	False	AATAAA	-21	NA	18260518	18266542	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18260738_18262713_18262868_18263085_18263249_18263709
H1_mix_00035668	chr17	+	453	2	FSM	ENSG00000237382.2	ENST00000439258.2	465	2	-14	26	-14	-26	multi-exon	FALSE	non_canonical	0	0	junction_1	0	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTCCCTATGGATTCATG	873	False	NA	NA	False	NA	NA	NA	18312745	18313507	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18312836_18313144
H1_mix_00035671	chr17	+	1191	1	FSM	ENSG00000224126.2	ENST00000428091.2	497	1	-516	-178	-516	178	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGAGAATTATTCCCTTA	4995	False	NA	NA	False	AATAAA	-36	NA	18676744	18677935	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18676700_18677900
H1_mix_00035673	chr17	+	1769	9	FSM	ENSG00000108448.23	ENST00000572555.5	1809	9	40	0	28	0	multi-exon	FALSE	canonical	2	5	junction_4	4.59449398737228	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGACGGAGTCTCGCACT	34	False	NA	NA	False	NA	NA	NA	18698037	18735667	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18698115_18699153_18699276_18699359_18699458_18701356_18701446_18722236_18722333_18727524_18727759_18731069_18731236_18732038_18732135_18734876
H1_mix_00035674	chr17	+	3142	7	FSM	ENSG00000108448.23	ENST00000449552.6	3189	7	47	0	47	0	multi-exon	FALSE	canonical	2	5	junction_2	5.40575824674228	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGCCAGATACCGTTCTT	53	False	NA	15	True	AATAAA	-22	NA	18698056	18736118	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18699276_18701356_18701446_18722236_18722333_18727524_18727759_18731069_18731236_18732038_18732135_18734876
H1_mix_00035677	chr17	+	2989	7	FSM	ENSG00000171928.14	ENST00000476139.5	2989	7	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	106.452519410716	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGACATGTGTAATCTCAT	50	False	NA	NA	False	TATAAA	-21	NA	18781313	18806714	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18782550_18789352_18789436_18790895_18791041_18797578_18797669_18798811_18798944_18804137_18804267_18805540
H1_mix_00035678	chr17	+	3298	4	FSM	ENSG00000171928.14	ENST00000482741.1	3298	4	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_3	42.5936875865688	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGACATGTGTAATCTCAT	NA	False	NA	NA	False	TATAAA	-21	NA	18795805	18806714	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18797669_18798811_18798944_18804137_18804267_18805540
H1_mix_00035682	chr17	+	1828	10	FSM	ENSG00000141127.15	ENST00000536323.5	1872	10	42	2	6	-2	multi-exon	FALSE	canonical	3	26	junction_2	99.6907564099112	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTCATCAGCTTGTTTT	68	False	NA	33	True	AATAAA	-34	NA	18858109	18931285	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18858262_18865801_18865953_18872582_18872650_18877697_18877871_18882567_18882684_18889821_18889878_18911102_18911252_18923913_18923985_18928810_18928958_18930539
H1_mix_00035683	chr17	+	1833	11	NIC	ENSG00000141127.15	novel	1958	12	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	66.1202692069535	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGCTGTGAATGTTGAAAT	-9	True	NA	16	True	AATAAA	-17	NA	18858140	18931268	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_18858262_18865801_18865953_18867281_18867335_18872582_18872650_18877697_18877871_18882567_18882684_18889821_18889878_18911102_18911252_18923913_18923985_18928810_18928958_18930539
H1_mix_00035687	chr17	+	4664	10	FSM	ENSG00000072134.16	ENST00000347697.6	4664	10	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_5	23.1809841182672	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGGTTTCTGGCTGTGTCC	NA	False	NA	17	True	TATAAA	-25	NA	19237376	19336715	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_19237532_19281954_19282078_19282949_19283715_19309884_19309998_19312051_19312145_19313104_19313280_19328710_19328888_19329560_19329648_19331852_19332069_19333955
H1_mix_00035692	chr17	+	3050	7	FSM	ENSG00000166484.20	ENST00000395602.8	3059	7	9	0	2	0	multi-exon	FALSE	canonical	3	137	junction_1	49.2634640366356	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGGTGTAATTTTTGGA	237	False	NA	24	True	AATACA	-21	NA	19378261	19383544	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_19378543_19378895_19379133_19379781_19379948_19380607_19381687_19381780_19382467_19382812_19382947_19383077
H1_mix_00035694	chr17	+	2926	7	FSM	ENSG00000166484.20	ENST00000395604.8	2902	7	-30	6	0	0	multi-exon	FALSE	canonical	3	109	junction_1	57.5634915163731	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGACTCCAGGTGTAATT	443	False	NA	18	True	AATACA	-15	NA	19378467	19383538	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_19378631_19378895_19379133_19379781_19379948_19380607_19381687_19381780_19382467_19382812_19382947_19383077
H1_mix_00035696	chr17	+	4533	3	FSM	ENSG00000166484.20	ENST00000570306.5	4533	3	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_1	23.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGACTCCAGGTGTAATT	18	True	NA	18	True	AATACA	-15	NA	19378528	19383538	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_19382467_19382812_19382947_19383077
H1_mix_00035700	chr17	+	599	1	FSM	ENSG00000228331.2	ENST00000422360.2	586	1	5	-18	5	18	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTGCAATTAAAAGGAAAACA	1581	False	NA	NA	False	ATTAAA	-5	NA	19496947	19497546	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_19496900_19497500
H1_mix_00035701	chr17	+	296	1	FSM	ENSG00000142494.13	ENST00000574596.1	1755	1	-81	1540	-49	-1540	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAAGGTGGCCTCAGT	NA	False	NA	NA	False	NA	NA	NA	19533778	19534074	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_19533800_19534100
H1_mix_00035704	chr17	+	3703	10	FSM	ENSG00000072210.19	ENST00000176643.11	3703	10	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_9	40.2246776414433	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTATTTGTCAACTTTT	-15	True	NA	25	True	TATAAA	-22	NA	19648750	19677596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19664947_19665048_19671720_19671957_19675557
H1_mix_00035705	chr17	+	3828	11	FSM	ENSG00000072210.19	ENST00000339618.8	3828	11	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_9	143.379252334499	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTATTTGTCAACTTTT	-15	True	NA	25	True	TATAAA	-22	NA	19648750	19677596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19664947_19665048_19671720_19671957_19673150_19673276_19675557
H1_mix_00035709	chr17	+	2258	12	FSM	ENSG00000128487.19	ENST00000581399.6	2251	12	-2	-5	-2	0	multi-exon	FALSE	canonical	3	58	junction_1	39.039289385214	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCCAGGGCAACCTGGAA	NA	False	NA	-8	True	AATAAA	-5	NA	20155991	20314734	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_20156237_20227412_20227621_20231757_20231832_20232199_20232406_20245925_20246072_20247218_20247320_20253504_20253587_20257450_20257608_20260191_20260295_20296960_20297078_20306022_20306083_20313975
H1_mix_00035710	chr17	+	8133	13	FSM	ENSG00000128487.19	ENST00000395530.6	8133	13	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_2	25.8327956933301	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTCTCACTGACATTT	NA	False	NA	NA	False	AATAAA	-20	NA	20155988	20319026	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_20156237_20204332_20205913_20227412_20227621_20231757_20231832_20232199_20232406_20245925_20246072_20247218_20247320_20253504_20253587_20257450_20257608_20260191_20260295_20296960_20297078_20306022_20306083_20313975
H1_mix_00035713	chr17	+	2542	6	FSM	ENSG00000128487.19	ENST00000395525.7	2536	6	-6	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	62.6022363817779	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACAAGTCTTATGAAAAGT	16	True	NA	NA	False	AATAAA	-23	NA	20156082	20237179	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_20156237_20204332_20205913_20227412_20227621_20231757_20231832_20232199_20232406_20236859
H1_mix_00035714	chr17	+	4520	8	FSM	ENSG00000128487.19	ENST00000677784.1	3293	8	-1193	-34	-1193	0	multi-exon	FALSE	canonical	3	133	junction_5	15.6021976474012	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCCAGGGCAACCTGGAA	2837	False	NA	-8	True	AATAAA	-5	NA	20242930	20314734	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_20246072_20247218_20247320_20253504_20253587_20257450_20257608_20260191_20260295_20296960_20297078_20306022_20306083_20313975
H1_mix_00035717	chr17	+	1312	1	FSM	ENSG00000226549.3	ENST00000455244.2	1081	1	-71	-160	-71	160	mono-exon	FALSE	NA	NA	NA	NA	NA	317	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACTCTGCCTTTATGATG	78	False	NA	NA	False	TTTAAA	-22	NA	20784573	20785885	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_20784600_20785900
H1_mix_00035720	chr17	+	2358	1	FSM	ENSG00000266369.1	ENST00000578888.1	1372	1	605	-1591	605	1591	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGGCCACGTGCAAGCTG	NA	False	NA	NA	False	NA	NA	NA	20856550	20858908	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_20856600_20858900
H1_mix_00035721	chr17	+	3542	3	FSM	ENSG00000233098.10	ENST00000583962.2	3382	3	-65	-95	12	95	multi-exon	FALSE	canonical	3	21	junction_2	11.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCGGTAGAATCCTTTTT	252	False	NA	NA	False	NA	NA	NA	20868454	20905325	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_20868686_20892229_20892433_20902217
H1_mix_00035722	chr17	+	1525	4	FSM	ENSG00000233098.10	ENST00000692309.1	1488	4	-32	-5	12	0	multi-exon	FALSE	canonical	3	15	junction_2	14.4299072146089	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGAATGTGATCTCT	252	False	NA	NA	False	AATAAA	-29	NA	20868454	20930046	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_20868686_20892229_20892433_20924358_20924834_20929430
H1_mix_00035724	chr17	+	1272	3	FSM	ENSG00000233098.10	ENST00000443508.8	1293	3	21	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	15	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGAATGTGATCTCT	16	False	NA	NA	False	AATAAA	-29	NA	20868504	20930046	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_20868686_20924358_20924834_20929430
H1_mix_00035727	chr17	+	2401	13	FSM	ENSG00000034152.19	ENST00000395491.6	2401	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	62.6632866996298	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	-4	True	NA	83	True	NA	NA	NA	21284671	21315213	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_21284970_21296085_21296211_21298412_21298480_21298877_21298927_21300544_21300659_21300873_21300994_21302142_21302260_21303182_21303235_21304425_21304554_21305050_21305129_21312141_21312282_21313491_21313538_21314146
H1_mix_00035728	chr17	+	2270	12	FSM	ENSG00000034152.19	ENST00000342679.9	2256	12	-14	0	-13	0	multi-exon	FALSE	canonical	3	131	junction_5	14.7911074468456	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTAAAGGTTGTGTGAGA	21	False	NA	102	True	ATTAAA	-17	NA	21284696	21315232	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_21284970_21298412_21298480_21298877_21298927_21300544_21300659_21300873_21300994_21302142_21302260_21303182_21303235_21304425_21304554_21305050_21305129_21312141_21312282_21313491_21313538_21314146
H1_mix_00035729	chr17	+	5102	3	FSM	ENSG00000184185.10	ENST00000583088.6	5263	3	134	27	134	-27	multi-exon	FALSE	canonical	2	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTAAATGCATTTTGATC	47	False	NA	-7	True	AATACA	-38	NA	21376490	21419843	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_21376914_21408518_21408641_21415286
H1_mix_00035730	chr17	+	1412	4	FSM	ENSG00000263563.7	ENST00000648259.1	1421	4	9	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATACTTGGTGTTTTGTCA	2	False	NA	NA	False	AATAAA	-18	NA	22090751	22205151	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_22090909_22181538_22181606_22183106_22183230_22204086
H1_mix_00035733	chr17	+	606	2	FSM	ENSG00000109046.15	ENST00000584354.1	544	2	-47	-15	-9	15	multi-exon	FALSE	canonical	3	515	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAACATTTTGATATT	NA	False	NA	NA	False	NA	NA	NA	27294066	27302024	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_27294436_27301787
H1_mix_00035735	chr17	+	5105	9	FSM	ENSG00000109046.15	ENST00000262394.7	5105	9	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_5	141.619593895054	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTCGTCATAACCTTGG	2	True	NA	2	True	AATAAA	-15	NA	27294113	27315926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_27294436_27301787_27301957_27303366_27303636_27304779_27304912_27306781_27306883_27309099_27309273_27310060_27310175_27311508_27311617_27312209
H1_mix_00035738	chr17	+	5667	19	NIC	ENSG00000141068.15	novel	6026	21	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	16.1846024981984	400	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGGGCTTGTCTTTGCT	276	False	NA	9	True	AATAAA	-15	NA	27456720	27626435	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_27456875_27550567_27550709_27577491_27577640_27582645_27583106_27588474_27588536_27590810_27590895_27592360_27592423_27592519_27592627_27597267_27597437_27601359_27601402_27603833_27603889_27604679_27604729_27605433_27605814_27607913_27608011_27609195_27609330_27610066_27610199_27611493_27611630_27617294_27617429_27623313
H1_mix_00035744	chr17	+	3570	7	FSM	ENSG00000109079.10	ENST00000226225.7	3570	7	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	5.76387215526353	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTACAGAGCCATGTTTAC	-2	True	NA	9	True	AATAAA	-17	NA	28335760	28347009	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28335857_28339407_28339727_28340308_28340479_28341236_28341327_28341403_28341457_28342246_28342443_28344363
H1_mix_00035746	chr17	+	7051	9	FSM	ENSG00000004139.14	ENST00000585482.6	10277	9	-26	3252	-26	2634	multi-exon	FALSE	canonical	3	18	junction_6	7.21110255092798	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAAAGGGCCATATTCCAA	-16	True	NA	NA	False	AATAAA	-17	NA	28371667	28400797	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28372503_28381202_28381822_28384356_28384570_28384838_28384931_28385039_28385276_28388173_28388277_28388349_28388540_28395904_28396027_28396156
H1_mix_00035747	chr17	+	968	2	NNC	ENSG00000004139.14	novel	10277	9	NA	NA	11	-14893	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGTGGAAAGATACAACTG	21	True	NA	NA	False	AAGAAA	-16	NA	28371704	28373501	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_28372503_28373331
H1_mix_00035751	chr17	+	5578	38	FSM	ENSG00000109111.15	ENST00000347486.8	5569	38	-9	0	-9	0	multi-exon	TRUE	canonical	2	9	junction_1	86.9516124475651	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTCTCTTTGGTGGTCAAC	-18	True	NA	23	True	CATAAA	-17	NA	28662188	28701735	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28662343_28672756_28672859_28673370_28673511_28674282_28674442_28674536_28674614_28674969_28675163_28675400_28675486_28676156_28676431_28677714_28677817_28678075_28678193_28678544_28678635_28678820_28678964_28681255_28681405_28681881_28681981_28682726_28682857_28682941_28683093_28683267_28683423_28683620_28683817_28684585_28684726_28684843_28684962_28686338_28686416_28686653_28686790_28687087_28687226_28687303_28687472_28688090_28688219_28689353_28689562_28690081_28690230_28690920_28691064_28693695_28693837_28695351_28695548_28696843_28697083_28697619_28697734_28697905_28698031_28699780_28699894_28700172_28700251_28700345_28700513_28700940_28701129_28701438
H1_mix_00035755	chr17	+	970	5	FSM	ENSG00000198242.14	ENST00000422514.7	970	5	0	0	0	0	multi-exon	FALSE	canonical	3	11065	junction_1	1714.97208432091	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCATTAGTGTTTTCAAT	3	True	NA	35	True	AATAAA	-23	NA	28719984	28724359	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28720031_28720706_28720891_28722722_28722900_28723570_28723641_28723866
H1_mix_00035756	chr17	+	1369	5	FSM	ENSG00000198242.14	ENST00000496182.5	636	5	-677	-56	-583	0	multi-exon	FALSE	canonical	3	394	junction_1	5907.74417078973	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACAGGGCTTGGGCAAGA	1404	False	NA	114	True	NA	NA	NA	28719401	28723992	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28720214_28720706_28720891_28722722_28722900_28723570_28723641_28723866
H1_mix_00035758	chr17	+	688	5	FSM	ENSG00000198242.14	ENST00000394938.8	688	5	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_1	5901.40197326025	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGCCTGTCTGTCAATT	-11	True	NA	58	True	AATATA	-26	NA	28720243	28723936	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28720431_28720706_28720891_28722722_28722900_28723570_28723641_28723866
H1_mix_00035759	chr17	+	412	2	FSM	ENSG00000198242.14	ENST00000580755.1	412	2	0	0	0	0	multi-exon	FALSE	canonical	3	11726	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCCTGTCTGTCAATTT	2747	False	NA	59	True	AATATA	-27	NA	28723299	28723937	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28723641_28723866
H1_mix_00035763	chr17	+	2917	7	FSM	ENSG00000076604.16	ENST00000262395.10	2894	7	-23	0	-23	0	multi-exon	FALSE	canonical	3	241	junction_3	19.8053023203384	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTGCCTTACTGTCTTG	5761	False	NA	15	True	ATTAAA	-15	NA	28743987	28750956	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28744256_28747212_28747265_28747842_28747948_28748016_28748179_28748261_28748424_28748510_28748667_28748944
H1_mix_00035764	chr17	+	1864	10	FSM	ENSG00000132591.12	ENST00000254928.10	1841	10	-23	0	-17	0	multi-exon	TRUE	canonical	3	494	junction_9	42.2727767519593	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTATTCCTTTTATTTAT	NA	False	NA	33	True	AATAAA	-22	NA	28854992	28861061	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28855318_28856263_28856392_28856504_28856583_28857938_28857986_28858145_28858208_28858373_28858487_28858575_28858825_28858963_28859114_28859202_28859284_28860430
H1_mix_00035769	chr17	+	831	7	FSM	ENSG00000167543.16	ENST00000580183.6	824	7	-7	0	-7	0	multi-exon	FALSE	canonical	1	2	junction_1	200.176588707737	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCCCCAGCCCACTCGC	737	False	NA	NA	False	NA	NA	NA	29568019	29572259	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_29568061_29568277_29568509_29569017_29569087_29569317_29569360_29571590_29571720_29571856_29572058_29572141
H1_mix_00035772	chr17	+	1473	7	FSM	ENSG00000167543.16	ENST00000301057.8	1473	7	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_1	26.2958594121246	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGAGTTGAGCTTGTGC	-13	True	NA	27	True	ATTAAA	-15	NA	29568700	29573157	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_29568831_29569017_29569087_29569317_29569360_29571590_29571720_29571856_29572058_29572141_29572698_29572811
H1_mix_00035773	chr17	+	2468	1	FSM	ENSG00000167543.16	ENST00000579674.1	2468	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGGAGTTGAGCTTGTG	1601	False	NA	26	True	ATTAAA	-14	NA	29570688	29573156	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_29570700_29573200
H1_mix_00035779	chr17	+	2437	6	FSM	ENSG00000126653.18	ENST00000612959.4	2420	6	-17	0	9	0	multi-exon	FALSE	canonical	3	57	junction_1	155.444652529445	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATGCATTTATTTTAAA	0	True	NA	18	True	AATAAA	-21	NA	30116789	30186474	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_30116864_30172541_30172599_30178070_30178200_30179089_30179298_30180907_30181017_30184614
H1_mix_00035780	chr17	+	2514	7	FSM	ENSG00000126653.18	ENST00000247026.10	2506	7	-9	1	0	0	multi-exon	FALSE	canonical	3	233	junction_1	78.9444248963929	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATGCATTTATTTTAAA	-13	True	NA	18	True	AATAAA	-21	NA	30116806	30186474	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_30116864_30118079_30118174_30172541_30172599_30178070_30178200_30179089_30179298_30180907_30181017_30184614
H1_mix_00035788	chr17	+	6729	9	FSM	ENSG00000108587.16	ENST00000225724.9	6039	9	27	-717	-19	717	multi-exon	TRUE	canonical	3	267	junction_2	85.8297733889587	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATACCTTCCCATTCTG	NA	False	NA	NA	False	AATAAA	-9	NA	30477388	30528309	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_30477465_30481142_30481264_30484213_30484302_30484662_30484771_30490125_30490218_30492678_30492754_30510879_30510910_30519938_30520022_30522253
H1_mix_00035794	chr17	+	4326	7	NIC	ENSG00000214719.13	novel	1273	7	NA	NA	0	1997	intron_retention	FALSE	canonical	3	14	junction_5	42.9240284947979	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTAATGGTAATAAATT	168	False	NA	91	True	AATAAA	-19	NA	30600891	30637463	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_30601013_30607551_30607666_30608429_30608563_30610888_30610943_30631754_30631896_30633097_30633391_30633993
H1_mix_00035795	chr17	+	4742	2	FSM	ENSG00000250462.8	ENST00000417404.2	4742	2	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	0	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAATGGTAATAAATTGGT	NA	False	NA	94	True	AATAAA	-22	NA	30632121	30637466	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_30633391_30633993
H1_mix_00035796	chr17	+	1508	8	NIC	ENSG00000264538.7	novel	1560	7	NA	NA	-269	0	intron_retention	FALSE	canonical	3	150	junction_1	99.1498556607674	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATTGCCTTTGTTTCTT	17	True	NA	14	True	AATATA	-18	NA	30709029	30770050	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_30709812_30734896_30734944_30735032_30735098_30743300_30743370_30759490_30759540_30766502_30766589_30768833_30769065_30769871
H1_mix_00035799	chr17	+	608	6	NIC	ENSG00000264538.7	novel	929	6	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	3	86	junction_4	145.635984564255	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATTGCCTTTGTTTCTT	603	False	NA	14	True	AATATA	-18	NA	30709615	30770050	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_30709812_30759490_30759540_30766502_30766589_30768833_30768868_30769000_30769065_30769871
H1_mix_00035800	chr17	+	746	5	NIC	ENSG00000264538.7	novel	929	6	NA	NA	3	0	intron_retention	FALSE	canonical	3	102	junction_1	126.040668040121	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATTGCCTTTGTTTCTT	598	False	NA	14	True	AATATA	-18	NA	30709610	30770050	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_30709812_30759490_30759540_30766502_30766589_30768833_30769065_30769871
H1_mix_00035801	chr17	+	801	6	NIC	ENSG00000264538.7	novel	929	6	NA	NA	17	0	intron_retention	FALSE	canonical	3	58	junction_1	132.811746468451	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATTGCCTTTGTTTCTT	-4	True	NA	14	True	AATATA	-18	NA	30709624	30770050	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_30709812_30743300_30743370_30759490_30759540_30766502_30766589_30768833_30769065_30769871
H1_mix_00035802	chr17	+	1088	10	Fusion	ENSG00000266490.1_ENSG00000264538.7	novel	563	7	NA	NA	32	-3	multi-exon	FALSE	canonical	3	24	junction_9	149.2120870224	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGCTTGAACTTATTCC	11	False	NA	33	True	AATAAA	-16	NA	30709639	30792830	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr17_+_30709812_30734896_30734944_30735032_30735098_30759490_30759540_30766502_30766589_30768833_30768868_30769000_30769065_30769871_30769966_30784782_30784893_30792463
H1_mix_00035806	chr17	+	1485	1	Genic_Genomic	ENSG00000264538.7	novel	NA	NA	NA	NA	6241	1463	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTATGTATGCTCTATGCA	252	False	NA	9	True	AATAAA	-23	NA	30790886	30792371	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr17_+_30790900_30792400
H1_mix_00035809	chr17	+	2686	13	FSM	ENSG00000176208.9	ENST00000585133.1	2686	13	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_8	15.8085332090685	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGGACTTTTAAAAAAGCA	775	False	NA	NA	False	NA	NA	NA	30835208	30869852	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_30836049_30837205_30837315_30840616_30840782_30843912_30844040_30844834_30844917_30855142_30855328_30856954_30857113_30858160_30858324_30860432_30860613_30865703_30865801_30868332_30868413_30869247_30869391_30869495
H1_mix_00035811	chr17	+	2070	5	FSM	ENSG00000181481.14	ENST00000328381.10	2054	5	-16	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	20.4006740084733	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTGAGTTCTGTGAGT	-21	True	NA	21	True	AATAAA	-21	NA	30971022	30999911	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_30971446_30984616_30984761_30987943_30988107_30997241_30997332_30998661
H1_mix_00035819	chr17	+	8358	13	FSM	ENSG00000284424.1_ENSG00000131242.18	ENST00000394744.6	1968	13	-18	-6372	-18	10	multi-exon	FALSE	canonical	3	151	junction_4	26.5145400362392	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGAGTTTCTGTGGTTG	NA	False	NA	26	True	AATAAA	-26	NA	31487981	31538221	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_31488273_31517650_31517878_31521165_31521361_31521914_31522050_31522359_31522396_31523511_31523612_31523892_31523997_31525089_31525231_31527841_31527924_31528405_31528544_31528619_31528779_31530325_31530470_31531615
H1_mix_00035823	chr17	+	3105	15	FSM	ENSG00000185158.12	ENST00000543378.6	3091	15	-14	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	29.5002594246635	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTAATGGTAATAAATT	586	False	NA	6	True	AATAAA	-19	NA	32007973	32053486	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_32008133_32017971_32018055_32020696_32020804_32021392_32022826_32024710_32024783_32027768_32027841_32030655_32030728_32031377_32031459_32034909_32034982_32035564_32035640_32045699_32045819_32047760_32047902_32049101_32049395_32050002_32050108_32053265
H1_mix_00035824	chr17	+	3152	12	FSM	ENSG00000185158.12	ENST00000327564.11	3162	12	0	10	0	-4	multi-exon	FALSE	canonical	3	39	junction_1	20.3518634799725	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAATAAATTGGTTACTG	NA	False	NA	14	True	AATAAA	-27	NA	32021004	32053494	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_32022826_32024710_32024783_32027768_32027841_32030655_32030728_32031377_32031459_32034909_32034982_32035564_32035640_32045699_32045819_32047760_32047902_32049101_32049395_32050002_32050108_32053265
H1_mix_00035831	chr17	+	997	2	FSM	ENSG00000185158.12	ENST00000579766.1	997	2	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGTAAGGTGTTGTCTA	NA	False	NA	NA	False	NA	NA	NA	32048977	32050582	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_32049395_32050002
H1_mix_00035843	chr17	+	5104	8	FSM	ENSG00000265794.5_ENSG00000141314.13	ENST00000538145.5	1338	8	-473	-3293	-128	0	multi-exon	FALSE	canonical	0	0	junction_3	32.2699076350632	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCATTGGTTATTCAGG	NA	False	NA	18	True	ATTAAA	-18	NA	32265703	32324656	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_32266301_32284658_32284818_32288791_32289017_32294293_32294443_32298091_32298205_32305340_32305442_32316231_32316293_32320957
H1_mix_00035844	chr17	+	5019	9	FSM	ENSG00000141314.13	ENST00000269051.9	5003	9	-17	1	-17	-1	multi-exon	FALSE	canonical	0	0	junction_4	36.6808447967055	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCATTGGTTATTCAGGAA	NA	False	NA	20	True	ATTAAA	-20	NA	32265814	32324658	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_32266301_32267901_32267926_32284658_32284818_32288791_32289017_32294293_32294443_32298091_32298205_32305340_32305442_32316231_32316293_32320957
H1_mix_00035845	chr17	+	4834	7	Fusion	ENSG00000265794.5_ENSG00000141314.13	novel	1338	8	NA	NA	-17	0	multi-exon	FALSE	canonical	0	0	junction_2	33.6571768803558	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCATTGGTTATTCAGG	NA	False	NA	18	True	ATTAAA	-18	NA	32265814	32324656	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr17_+_32266301_32288791_32289017_32294293_32294443_32298091_32298205_32305340_32305442_32316231_32316293_32320957
H1_mix_00035846	chr17	+	1326	8	NIC	ENSG00000141314.13	novel	5003	9	NA	NA	-122	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	39.6726400350032	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTAGATTTGGACACAC	224	False	NA	-49	True	NA	NA	NA	32266053	32321363	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_32266301_32267901_32267926_32288791_32289017_32294293_32294443_32298091_32298205_32305340_32305442_32316231_32316293_32320957
H1_mix_00035847	chr17	+	4470	7	FSM	ENSG00000141314.13	ENST00000536287.2	4470	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	38.9090820589058	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCATTGGTTATTCAGG	59	False	NA	18	True	ATTAAA	-18	NA	32267803	32324656	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_32267926_32288791_32289017_32294293_32294443_32298091_32298205_32305340_32305442_32316231_32316293_32320957
H1_mix_00035849	chr17	+	2306	11	FSM	ENSG00000010244.19	ENST00000321233.10	2283	11	-23	0	-23	0	multi-exon	FALSE	canonical	3	30	junction_5	398.5993602604	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATATATCATTGGATTC	NA	False	NA	21	True	AATAAA	-22	NA	32350108	32370451	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_32350327_32351785_32351913_32358502_32358642_32360597_32360766_32360891_32360968_32362913_32362985_32365329_32365488_32366664_32366758_32367771_32368015_32369294_32369455_32369598
H1_mix_00035850	chr17	+	13759	12	FSM	ENSG00000010244.19	ENST00000394670.9	13740	12	-19	0	0	0	multi-exon	FALSE	canonical	3	471	junction_8	262.148560493082	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATACTTGTCTGAGCCCAT	NA	False	NA	14	True	AATAAA	-20	NA	32350137	32381885	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_32350327_32351785_32351913_32358502_32358642_32360597_32360766_32360891_32360968_32361467_32361516_32362913_32362985_32365329_32365488_32366664_32366758_32367771_32368015_32369294_32369455_32369598
H1_mix_00035853	chr17	+	400	5	FSM	ENSG00000108671.11	ENST00000578213.5	480	5	80	0	-2	0	multi-exon	FALSE	canonical	1	7	junction_1	944.511910988951	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGCATTGCATTTGGGTA	NA	False	NA	NA	False	NA	NA	NA	32444458	32464561	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_32444519_32446944_32447047_32454494_32454620_32464048_32464121_32464520
H1_mix_00035854	chr17	+	2174	13	FSM	ENSG00000108671.11	ENST00000457654.6	2159	13	-15	0	-2	0	multi-exon	FALSE	canonical	3	1916	junction_5	142.40571929838	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTAGCCCCCAAGGGGCCT	NA	False	NA	NA	False	NA	NA	NA	32444458	32481471	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_32444615_32446944_32447047_32454494_32454620_32464048_32464121_32464520_32464579_32468998_32469194_32473800_32473946_32474763_32474825_32477520_32477584_32479250_32479377_32479850_32479887_32480145_32480198_32480488
H1_mix_00035855	chr17	+	3856	14	FSM	ENSG00000108671.11	ENST00000261712.8	3850	14	-6	0	0	0	multi-exon	FALSE	canonical	3	1916	junction_5	139.509919903494	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTCCCTTTTACTTGT	14	True	NA	NA	False	AATAAA	-19	NA	32444503	32483319	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_32444615_32446944_32447047_32454494_32454620_32464048_32464121_32464520_32464579_32468998_32469194_32473800_32473946_32474763_32474825_32477520_32477584_32479250_32479377_32479850_32479887_32480145_32480198_32480488_32480632_32480752
H1_mix_00035859	chr17	+	4218	8	FSM	ENSG00000006042.12	ENST00000579849.6	4218	8	0	0	0	0	multi-exon	FALSE	canonical	3	580	junction_1	89.5975127205788	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCTGTGGAAGAGGGTT	-26	True	NA	NA	False	AATAAA	-13	NA	32928152	32944315	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_32928238_32931326_32931403_32931474_32931660_32933173_32933306_32934290_32934325_32936331_32936448_32939476_32939537_32940785
H1_mix_00035860	chr17	+	343	1	FSM	ENSG00000264643.1	ENST00000577546.1	307	1	9	-45	9	45	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGCCTCACAAAACTGGA	NA	False	NA	NA	False	NA	NA	NA	33680585	33680928	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_33680600_33680900
H1_mix_00035862	chr17	+	741	3	FSM	ENSG00000108691.9	ENST00000225831.4	741	3	0	0	0	0	multi-exon	FALSE	canonical	3	496	junction_2	17	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACTTCCAGTGTTTTCT	1	True	NA	22	True	AATAAA	-18	NA	34255284	34257203	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_34255426_34256221_34256340_34256721
H1_mix_00035865	chr17	+	734	4	FSM	ENSG00000005156.12	ENST00000592690.1	722	4	-12	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	137.915433025701	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAGGTGTGGCATGAGCA	14	True	NA	NA	False	NA	NA	NA	34980545	34989657	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_34980623_34983231_34983553_34985987_34986132_34989465
H1_mix_00035866	chr17	+	11586	20	FSM	ENSG00000005156.12	ENST00000262327.9	3055	20	0	-8531	0	1960	multi-exon	FALSE	canonical	3	35	junction_19	78.7123871394883	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCATCATCACTCCAAGA	14	True	NA	NA	False	NA	NA	NA	34980545	35011703	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_34980623_34983001_34983553_34985987_34986132_34989465_34989664_34990962_34991115_34991670_34991838_34991957_34992036_34992523_34992693_34994275_34994432_34996063_34996196_34996573_34996654_34997737_34997826_34998218_34998297_34998603_34998728_34999306_34999450_34999781_34999857_35001256_35001404_35001908_35002105_35002667_35002790_35002994
H1_mix_00035874	chr17	+	1230	4	FSM	ENSG00000267364.3	ENST00000657419.1	1271	4	27	14	-1	-14	multi-exon	FALSE	canonical	1	1	junction_1	5.24933858267454	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCAAGTGAAAAACTTCTG	4	True	NA	6	True	AATATA	-17	NA	35313522	35325434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_35313645_35321734_35321866_35323147_35323344_35324653
H1_mix_00035875	chr17	+	1410	2	FSM	ENSG00000267321.4	ENST00000659685.1	1410	2	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_1	0	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGTTTCATAGAAACTTTA	7	True	NA	NA	False	NA	NA	NA	35568115	35574900	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_35568502_35573876
H1_mix_00035876	chr17	+	2198	14	FSM	ENSG00000006125.18	ENST00000616784.4	2542	14	344	0	-31	0	multi-exon	FALSE	canonical	2	221	junction_9	37.4092985940899	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCATCTTTCTTCCCTT	8489	False	NA	NA	False	NA	NA	NA	35587242	35657791	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_35587429_35594007_35594068_35598229_35598336_35605704_35605841_35608141_35608388_35624396_35624588_35626620_35626843_35627384_35627506_35627630_35627727_35636340_35636457_35639594_35639761_35641876_35641976_35650529_35650790_35657598
H1_mix_00035877	chr17	+	3656	22	FSM	ENSG00000006125.18	ENST00000612116.5	3483	22	-178	5	0	0	multi-exon	TRUE	canonical	2	8	junction_1	85.2234624311453	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACTGCACTTTACTGTT	-38	True	NA	14	True	ATTAAA	-20	NA	35587273	35724086	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_35587664_35594007_35594068_35598229_35598336_35605704_35605841_35608141_35608388_35624396_35624588_35626620_35626843_35627384_35627506_35627630_35627727_35636340_35636457_35639594_35639761_35641876_35641976_35650529_35650790_35657598_35657792_35670856_35670899_35671753_35671901_35674175_35674322_35682694_35682825_35709223_35709309_35710233_35710321_35717194_35717350_35723624
H1_mix_00035878	chr17	+	5710	21	FSM	ENSG00000006125.18	ENST00000621914.4	5702	21	-8	0	-8	0	multi-exon	FALSE	canonical	2	181	junction_14	40.1239018541318	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAAGTTTGTGGTATG	-46	True	NA	NA	False	AATAAA	-14	NA	35587265	35726409	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_35587429_35594007_35594068_35598229_35598336_35605704_35605841_35608141_35608388_35624396_35624588_35626620_35626843_35627384_35627506_35627630_35627727_35636340_35636457_35639594_35639761_35641876_35641976_35650529_35650790_35657598_35657792_35671753_35671901_35674175_35674322_35682694_35682825_35709223_35709309_35710233_35710321_35717194_35717350_35723624
H1_mix_00035879	chr17	+	3500	21	NIC	ENSG00000006125.18	novel	5700	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	74	junction_1	60.6327263117864	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACTGCACTTTACTGTT	10	True	NA	14	True	ATTAAA	-20	NA	35587321	35724086	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_35587598_35594007_35594068_35598229_35598336_35605704_35605841_35608141_35608388_35624396_35624588_35626620_35626843_35627384_35627506_35627630_35627727_35636340_35636457_35639594_35639761_35641876_35641976_35650529_35650790_35657598_35657792_35671753_35671901_35674175_35674322_35682694_35682825_35709223_35709309_35710233_35710321_35717194_35717350_35723624
H1_mix_00035880	chr17	+	5700	22	FSM	ENSG00000006125.18	ENST00000610402.5	5700	22	0	0	0	0	multi-exon	FALSE	canonical	2	100	junction_14	63.8072494264177	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTTTGTGGTATGTATT	10	True	NA	NA	False	AATAAA	-18	NA	35587321	35726413	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_35587429_35594007_35594068_35598229_35598336_35605704_35605841_35608141_35608388_35624396_35624588_35626620_35626843_35627384_35627506_35627630_35627727_35636340_35636457_35639594_35639761_35641876_35641976_35650529_35650790_35657598_35657792_35670856_35670899_35671753_35671901_35674175_35674322_35682694_35682825_35709223_35709309_35710233_35710321_35717194_35717350_35723624
H1_mix_00035881	chr17	+	2469	15	NIC	ENSG00000006125.18	novel	2161	15	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	2	47	junction_14	73.5477076877482	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGTACAAGAGAGGGT	17	True	NA	19	True	AATAAA	-24	NA	35587328	35660120	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_35587429_35594007_35594068_35598229_35598336_35605704_35605841_35608141_35608388_35624396_35624588_35626620_35626843_35627384_35627506_35627630_35627727_35636340_35636457_35639594_35639761_35641876_35641976_35650529_35650790_35657598_35657792_35659763
H1_mix_00035882	chr17	+	3349	22	NIC	ENSG00000006125.18	novel	3415	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	74	junction_1	76.4986624162405	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACTGCACTTTACTGTT	35	True	NA	14	True	ATTAAA	-20	NA	35587514	35724086	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_35587598_35594007_35594068_35598229_35598336_35605704_35605841_35608141_35608388_35624396_35624588_35626620_35626843_35627384_35627506_35627630_35627727_35636340_35636457_35639594_35639761_35641876_35641976_35650529_35650790_35657598_35657792_35670856_35670899_35671753_35671901_35674175_35674322_35682694_35682825_35709223_35709309_35710233_35710321_35717194_35717350_35723624
H1_mix_00035884	chr17	+	3139	1	FSM	ENSG00000270647.7	ENST00000604434.1	2103	1	-22	-1014	-22	1014	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAACCTGAAAAACAT	NA	False	NA	NA	False	NA	NA	NA	35809459	35812598	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_35809500_35812600
H1_mix_00035885	chr17	+	2186	16	FSM	ENSG00000270647.7	ENST00000605844.6	2162	16	-24	0	-22	0	multi-exon	FALSE	canonical	3	13	junction_7	15.3269551951963	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACTAGTGCATTGTTCTG	NA	False	NA	46	True	AATAAA	-28	NA	35809459	35847242	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_35809577_35817715_35817756_35820023_35820076_35820163_35820249_35820331_35820438_35822639_35822834_35824077_35824199_35833906_35833942_35834565_35834599_35836131_35836242_35838423_35838554_35842366_35842460_35844076_35844159_35844279_35844369_35844476_35845039_35846905
H1_mix_00035886	chr17	+	2163	16	FSM	ENSG00000270647.7	ENST00000604841.5	2140	16	-23	0	-16	0	multi-exon	FALSE	canonical	3	8	junction_4	15.9114214743163	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTACATACTAGTGCA	NA	False	NA	38	True	AATAAA	-20	NA	35809465	35847234	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_35809577_35817715_35817756_35820023_35820076_35820163_35820240_35820331_35820438_35822639_35822834_35824077_35824199_35833906_35833942_35834565_35834599_35836131_35836242_35838423_35838554_35842366_35842460_35844076_35844159_35844279_35844369_35844476_35845039_35846905
H1_mix_00035889	chr17	+	978	5	FSM	ENSG00000273611.5	ENST00000620863.4	881	5	-97	0	-26	0	multi-exon	FALSE	canonical	1	24	junction_2	319.905747838328	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTCCTTTTTAAAGG	NA	False	NA	81	True	AATAAA	-21	NA	36486602	36495822	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_36486786_36486934_36486967_36492817_36492900_36493925_36494007_36495222
H1_mix_00035891	chr17	+	908	5	FSM	ENSG00000273611.5	ENST00000617429.5	905	5	-3	0	0	0	multi-exon	FALSE	canonical	3	707	junction_2	29.521178838251	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTCCTTTTTAAAGG	-7	True	NA	81	True	AATAAA	-21	NA	36486677	36495822	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_36486786_36486934_36486967_36492812_36492900_36493925_36494007_36495222
H1_mix_00035892	chr17	+	3642	3	FSM	ENSG00000273611.5	ENST00000617922.4	4420	3	778	0	778	0	multi-exon	FALSE	canonical	3	752	junction_1	19	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTTTGTTCCTTTTTAA	3251	False	NA	78	True	AATAAA	-18	NA	36489935	36495819	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_36492900_36493925_36494007_36495222
H1_mix_00035897	chr17	+	2823	14	FSM	ENSG00000278311.5	ENST00000613102.5	2816	14	-7	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	62.253632768694	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGTACATGTTTCTAC	-23	True	NA	NA	False	AATAAA	-28	NA	36544911	36589848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_36545098_36545618_36545818_36554819_36554901_36557082_36557337_36560772_36560872_36567662_36567777_36577982_36578187_36579244_36579420_36581343_36581539_36585299_36585451_36585839_36585966_36586049_36586199_36586996_36587246_36589207
H1_mix_00035898	chr17	+	2887	14	NNC	ENSG00000278311.5	novel	2816	14	NA	NA	-58	0	at_least_one_novel_splicesite	TRUE	canonical	3	94	junction_1	58.2058172330164	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGTACATGTTTCTAC	4551	False	NA	NA	False	AATAAA	-28	NA	36544853	36589848	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_36545098_36545618_36545818_36554819_36554901_36557082_36557337_36560772_36560872_36567662_36567777_36577982_36578193_36579244_36579420_36581343_36581539_36585299_36585451_36585839_36585966_36586049_36586199_36586996_36587246_36589207
H1_mix_00035900	chr17	+	2722	13	NNC	ENSG00000278311.5	novel	2816	14	NA	NA	36	0	at_least_one_novel_splicesite	FALSE	canonical	3	139	junction_6	40.5102010472534	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGTACATGTTTCTAC	-50	True	NA	NA	False	AATAAA	-28	NA	36545539	36589848	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_36545818_36554819_36554901_36557082_36557337_36560772_36560872_36567662_36567777_36577982_36578193_36579244_36579420_36581343_36581539_36585299_36585451_36585839_36585966_36586049_36586199_36586996_36587246_36589207
H1_mix_00035901	chr17	+	2747	13	ISM	ENSG00000278311.5	ENST00000613102.5	2816	14	590	0	5	0	3prime_fragment	FALSE	canonical	3	112	junction_6	47.1713778565868	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGTACATGTTTCTAC	471	False	NA	NA	False	AATAAA	-28	NA	36545508	36589848	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_36545818_36554819_36554901_36557082_36557337_36560772_36560872_36567662_36567777_36577982_36578187_36579244_36579420_36581343_36581539_36585299_36585451_36585839_36585966_36586049_36586199_36586996_36587246_36589207
H1_mix_00035903	chr17	+	638	3	FSM	ENSG00000278535.5	ENST00000612205.1	638	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	187.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTATCTGAGTCTATTAG	29	True	NA	12	True	ATTAAA	-25	NA	36591914	36597013	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_36592157_36594970_36595181_36596827
H1_mix_00035905	chr17	+	5390	1	FSM	ENSG00000278535.5	ENST00000610443.1	4505	1	-887	2	824	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATCTGCCTTGGCTTCAG	3525	False	NA	12	True	ATTAAA	-16	NA	36595410	36600800	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_36595400_36600800
H1_mix_00035908	chr17	+	1569	1	FSM	ENSG00000275720.1	ENST00000618067.1	630	1	-1005	66	-1005	-66	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGGATATGTGTGAGGTG	NA	False	NA	NA	False	NA	NA	NA	36633063	36634632	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_36633100_36634600
H1_mix_00035909	chr17	+	584	4	Intergenic	novelGene_554	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_2	2.62466929133727	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTGTTGATCTGTCC	NA	False	NA	14	True	AATATA	-21	NA	36733137	36748868	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_36733444_36735058_36735163_36743119_36743173_36748747
H1_mix_00035912	chr17	+	4118	5	FSM	ENSG00000273706.5	ENST00000614239.1	3425	5	-693	0	-3	0	multi-exon	FALSE	canonical	3	49	junction_1	9.52299847737046	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAATTGGTGTGTTATTTG	-8	True	NA	20	True	AATAAA	-40	NA	36936781	36944612	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_36938368_36940289_36940517_36940609_36940888_36942199_36942366_36942751
H1_mix_00035914	chr17	+	2598	11	FSM	ENSG00000275700.6	ENST00000681800.1	2598	11	0	0	0	0	multi-exon	FALSE	canonical	3	728	junction_2	58.7647002885235	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGCATTGTTACCGCCAC	6718	False	NA	-1	True	TTTAAA	-12	NA	36948924	37056852	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_36949217_36950213_36950406_36952885_36953297_36953769_36953908_36986616_36986732_36988518_36989412_36990773_36990858_37019004_37019073_37020933_37021015_37031613_37031686_37056600
H1_mix_00035916	chr17	+	2062	12	FSM	ENSG00000275700.6	ENST00000619387.5	2062	12	0	0	0	0	multi-exon	FALSE	canonical	3	728	junction_2	56.0759520355581	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCGCTTGTGATTTCTTA	-26	True	NA	18	True	AATAAA	-18	NA	36948953	37056871	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_36949217_36950213_36950406_36952885_36953297_36953769_36953908_36986616_36986732_36988518_36988721_36989246_36989412_36990773_36990858_37019004_37019073_37020933_37021015_37031613_37031686_37056600
H1_mix_00035919	chr17	+	4232	16	FSM	ENSG00000276234.5	ENST00000615182.5	4236	16	4	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	8.22030007562579	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAATGACTCTTCTCTGTG	-14	True	NA	5	True	AATAAA	-18	NA	37406889	37479725	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_37406950_37411268_37411391_37423508_37423616_37426949_37427010_37437737_37437830_37440504_37440663_37442563_37442653_37444695_37444769_37458523_37458588_37462077_37462122_37465430_37465542_37467453_37467526_37470399_37470533_37471093_37471138_37474555_37474630_37476796
H1_mix_00035921	chr17	+	1948	16	FSM	ENSG00000276234.5	ENST00000612272.4	1948	16	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	15.9284511348579	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTCCTAACACCTCTTG	-12	True	NA	5	True	ATTAAA	-13	NA	37407223	37477228	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_37407497_37411268_37411391_37423508_37423616_37426949_37427010_37437737_37437830_37440504_37440663_37442563_37442653_37444695_37444769_37458523_37458588_37462077_37462122_37465430_37465542_37467453_37467526_37470399_37470533_37471093_37471138_37474555_37474630_37476796
H1_mix_00035923	chr17	+	1610	3	NNC	ENSG00000276023.5	novel	1474	3	NA	NA	-141	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	151	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGAATTTTTACTAATAAT	576	False	NA	NA	False	AATAAA	-18	NA	37489749	37513498	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_37489953_37510675_37510765_37512180
H1_mix_00035924	chr17	+	1474	3	FSM	ENSG00000276023.5	ENST00000617516.5	1474	3	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_1	20.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGAATTTTTACTAATAAT	-1	True	NA	NA	False	AATAAA	-18	NA	37489890	37513498	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_37489959_37510676_37510765_37512180
H1_mix_00035925	chr17	+	2207	2	FSM	ENSG00000276023.5	ENST00000614411.1	2207	2	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTTTACTAATAATTTC	137	False	NA	NA	False	AATAAA	-21	NA	37509878	37513501	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_37510765_37512180
H1_mix_00035926	chr17	+	379	4	ISM	ENSG00000274419.6	ENST00000616101.4	2116	14	7458	1873	7458	-1873	internal_fragment	FALSE	canonical	3	5	junction_2	5.79271573232759	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGAAAGCAGGGGGACC	NA	False	NA	NA	False	AAGAAA	-3	NA	38011433	38013029	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_38011526_38011909_38011976_38012438_38012539_38012908
H1_mix_00035931	chr17	+	3685	25	FSM	ENSG00000275832.5	ENST00000620417.4	3663	25	-22	0	0	0	multi-exon	TRUE	canonical	1	2	junction_22	51.9548415025545	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGGCCGCTGCCTGGCGCC	-5	True	NA	NA	False	NA	NA	NA	38428463	38510136	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_38428549_38458101_38458264_38460904_38460933_38462845_38462942_38463117_38463197_38463327_38463383_38466166_38467332_38469143_38469300_38469523_38469636_38469846_38469905_38471862_38472007_38477578_38477897_38479435_38479498_38479752_38479884_38482021_38482144_38482522_38482679_38486061_38486141_38490101_38490176_38490461_38490552_38491406_38491533_38497784_38497827_38498413_38498511_38498931_38498955_38500596_38500629_38509943
H1_mix_00035932	chr17	+	5911	24	FSM	ENSG00000275832.5	ENST00000622683.5	5911	24	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	36.8128665762075	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGAGTCAGCTGTCTCA	-5	True	NA	28	True	AATAAA	-14	NA	38428463	38512385	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_38428549_38458101_38458264_38460904_38460933_38462845_38462942_38463117_38463197_38463327_38463383_38466166_38467332_38469143_38469300_38469523_38469636_38469846_38469905_38471862_38472007_38477578_38477897_38479435_38479498_38479752_38479884_38482021_38482144_38482522_38482679_38486061_38486141_38490101_38490176_38490461_38490552_38491406_38491533_38497784_38497827_38498413_38498511_38500596_38500629_38509943
H1_mix_00035934	chr17	+	4080	24	NNC	ENSG00000275832.5	novel	769	8	NA	NA	-16	-3558	intron_retention	FALSE	canonical	3	18	junction_23	42.119776998065	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTTCTCACAGTTCTAC	0	True	NA	24	True	AATAAA	-34	NA	38453673	38506502	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_38454141_38458101_38458264_38460904_38460933_38462845_38462942_38463117_38463197_38463327_38463383_38466166_38467332_38469143_38469300_38469523_38469636_38469846_38469905_38471862_38472007_38477578_38477897_38479435_38479498_38479752_38479884_38482021_38482144_38482522_38482679_38486061_38486141_38490101_38490176_38490461_38490552_38491406_38491533_38497784_38497827_38498413_38498511_38500596_38500629_38506273
H1_mix_00035935	chr17	+	488	6	FSM	ENSG00000275832.5	ENST00000616909.1	488	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	57.3075911201998	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAGGCACGAGGGCTGGA	6971	False	NA	NA	False	NA	NA	NA	38471938	38482558	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_38472007_38477827_38477897_38479435_38479498_38479752_38479884_38482021_38482144_38482522
H1_mix_00035942	chr17	+	2552	4	FSM	ENSG00000277972.2	ENST00000613478.2	2552	4	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_1	15.121728296285	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGAGTGGGGAGGAGAGA	-7	True	NA	NA	False	NA	NA	NA	38730340	38735605	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_38730407_38730759_38730796_38731319_38731440_38733275
H1_mix_00035944	chr17	+	602	5	FSM	ENSG00000277791.5	ENST00000620309.4	552	5	-50	0	-18	0	multi-exon	FALSE	canonical	3	168	junction_3	1121.77415284896	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCTTTTGTCTTTGAT	2800	False	NA	27	True	AATAAA	-16	NA	38752722	38764225	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_38752830_38753149_38753335_38755882_38755991_38762410_38762506_38764118
H1_mix_00035945	chr17	+	4743	7	FSM	ENSG00000002834.18	ENST00000318008.11	3910	7	-833	0	-634	0	multi-exon	FALSE	canonical	3	529	junction_6	57.1792988958611	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTTTCCTCTCTGGCTC	NA	False	NA	27	True	AATAAA	-22	NA	38869224	38921770	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_38870259_38878085_38878181_38890419_38890505_38898411_38898520_38914324_38914476_38915042_38915147_38918604
H1_mix_00035946	chr17	+	2949	2	FSM	ENSG00000263874.2	ENST00000583195.2	3692	2	395	348	395	-348	multi-exon	FALSE	canonical	3	10	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGATATATACCACTGGT	6186	False	NA	NA	False	NA	NA	NA	38925562	38929036	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_38925892_38926416
H1_mix_00035949	chr17	+	768	6	FSM	ENSG00000108298.12	ENST00000678147.1	844	6	0	76	0	32	multi-exon	FALSE	canonical	2	4	junction_2	5624.46041500871	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGTTTTTTTTTTTTTT	-2	True	NA	111	True	NA	NA	NA	39200282	39204764	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39200350_39201212_39201324_39202321_39202440_39202988_39203110_39204076_39204188_39204524
H1_mix_00035950	chr17	+	1248	5	FSM	ENSG00000108298.12	ENST00000577741.2	1247	5	-1	0	0	0	multi-exon	FALSE	canonical	3	10069	junction_1	1954.85376690943	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCTCTGCTTCTTGCA	1	True	NA	74	True	AATAAA	-17	NA	39200315	39204727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39200350_39201212_39201320_39202316_39203110_39204076_39204188_39204524
H1_mix_00035951	chr17	+	690	6	FSM	ENSG00000108298.12	ENST00000579374.5	690	6	0	0	0	0	multi-exon	FALSE	canonical	3	675	junction_1	5619.1926608722	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCTCTGCTTCTTGCA	1	True	NA	74	True	AATAAA	-17	NA	39200315	39204727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39200350_39201221_39201320_39202316_39202440_39202988_39203110_39204076_39204188_39204524
H1_mix_00035952	chr17	+	1529	5	FSM	ENSG00000108298.12	ENST00000678573.1	1330	5	-165	-34	0	0	multi-exon	FALSE	canonical	3	13054	junction_4	951.293067356217	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGCCTTCCTCTCTGCT	-5	True	NA	67	True	AATAAA	-10	NA	39200341	39204720	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39201320_39202316_39202440_39202988_39203110_39204076_39204188_39204524
H1_mix_00035953	chr17	+	1060	6	FSM	ENSG00000108298.12	ENST00000579260.5	1051	6	0	-9	0	0	multi-exon	FALSE	canonical	3	1226	junction_1	5401.4371050675	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGCCTTCCTCTCTGCT	-5	True	NA	67	True	AATAAA	-10	NA	39200341	39204720	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39200744_39201212_39201320_39202316_39202440_39202988_39203110_39204076_39204188_39204524
H1_mix_00035954	chr17	+	795	6	FSM	ENSG00000108298.12	ENST00000582193.5	792	6	-3	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	5873.55610852574	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGCCTTCCTCTCTGCT	-5	True	NA	67	True	AATAAA	-10	NA	39200341	39204720	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39200479_39201212_39201320_39202316_39202440_39202988_39203110_39204076_39204188_39204524
H1_mix_00035955	chr17	+	1351	4	FSM	ENSG00000108298.12	ENST00000585199.2	1351	4	0	0	0	0	multi-exon	FALSE	canonical	3	13054	junction_3	876.061768497075	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTTATCCAAGGAGGAAG	382	False	NA	-39	True	NA	NA	NA	39200962	39204614	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39201320_39202316_39203110_39204076_39204188_39204524
H1_mix_00035957	chr17	+	8235	14	FSM	ENSG00000167258.15	ENST00000430627.6	5918	14	-250	-2067	0	0	multi-exon	FALSE	canonical	3	28	junction_13	17.814627325475	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTTTGCTCCATTGCAT	16	True	NA	6	True	ATTAAA	-18	NA	39461510	39534544	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39463118_39470878_39471764_39490556_39490734_39492750_39492891_39494523_39494695_39501249_39501440_39509704_39509762_39511528_39511631_39515730_39515809_39517439_39517557_39519955_39520088_39524673_39524886_39525863_39526317_39530630
H1_mix_00035958	chr17	+	8228	14	NIC	ENSG00000167258.15	novel	8287	14	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	22.7007806867293	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTTTGCTCCATTGCAT	20	True	NA	6	True	ATTAAA	-18	NA	39461514	39534544	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_39463118_39470881_39471764_39490556_39490734_39492750_39492891_39494523_39494695_39501249_39501440_39509704_39509762_39511528_39511631_39515730_39515809_39517439_39517557_39519955_39520088_39524673_39524886_39525863_39526317_39530630
H1_mix_00035964	chr17	+	1466	5	FSM	ENSG00000131771.14	ENST00000579000.5	1466	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	29.4904645605999	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTGAGACTCCTCTTT	246	False	NA	12	True	AATAAA	-12	NA	39627199	39636622	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39627474_39629169_39629231_39633882_39634087_39635606_39635727_39635815
H1_mix_00035966	chr17	+	2879	3	FSM	ENSG00000131771.14	ENST00000580029.1	2879	3	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	4.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGAGACTCCTCTTTCAG	2968	False	NA	15	True	AATAAA	-15	NA	39632137	39636625	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39634087_39635606_39635727_39635815
H1_mix_00035967	chr17	+	2127	15	FSM	ENSG00000131748.16	ENST00000336308.10	2770	15	-89	732	-35	0	multi-exon	TRUE	canonical	3	321	junction_6	26.6095157139436	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATTCCA	7885	False	NA	17	True	ATTAAA	-12	NA	39637054	39663469	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39637232_39653480_39653751_39657007_39657086_39657774_39657853_39657972_39658027_39658404_39658523_39658721_39658821_39659050_39659107_39659460_39659554_39660210_39660274_39660430_39660527_39660809_39660890_39660980_39661086_39662250_39662345_39662803
H1_mix_00035968	chr17	+	851	9	FSM	ENSG00000131748.16	ENST00000578232.5	851	9	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_1	118.936958091251	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAAGCCCTCTCCCACC	7920	False	NA	NA	False	NA	NA	NA	39637089	39659553	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39637232_39653617_39653751_39657007_39657086_39657774_39657853_39657972_39658027_39658404_39658523_39658721_39658821_39659050_39659107_39659460
H1_mix_00035969	chr17	+	1353	5	FSM	ENSG00000131748.16	ENST00000583582.5	1350	5	-3	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	139.099559668606	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGAGGGCTGGTGTGTGGG	-14	True	NA	NA	False	NA	NA	NA	39637138	39658819	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39637232_39653480_39653751_39657007_39657086_39657774_39657840_39657972
H1_mix_00035970	chr17	+	1346	9	FSM	ENSG00000131748.16	ENST00000585269.5	1346	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	118.989954933179	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACCTTTGTATTAAGCCAA	4837	False	NA	-19	True	NA	NA	NA	39658393	39663433	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39658523_39659050_39659107_39659460_39659554_39660210_39660274_39660430_39660527_39660809_39660890_39660980_39661086_39662250_39662345_39662803
H1_mix_00035971	chr17	+	835	3	FSM	ENSG00000141744.4	ENST00000394246.1	821	3	-14	0	-14	0	multi-exon	FALSE	canonical	3	8	junction_1	23	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGCGGTCAGTGCTGTG	-2	True	NA	6	True	AATAAA	-15	NA	39667966	39670473	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39668071_39669628_39669837_39669950
H1_mix_00035972	chr17	+	1205	3	FSM	ENSG00000141744.4	ENST00000269582.3	958	3	-249	2	223	0	multi-exon	FALSE	canonical	3	31	junction_1	11.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGCGGTCAGTGCTGTG	188	False	NA	6	True	AATAAA	-15	NA	39668203	39670473	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39668678_39669628_39669837_39669950
H1_mix_00035974	chr17	+	4564	27	FSM	ENSG00000141736.14	ENST00000406381.6	4564	27	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	316.746751266481	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCACCGGCCTATGTCTGGG	6738	False	NA	24	True	AATATA	-17	NA	39694930	39728662	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39695182_39706989_39707142_39708320_39708535_39709317_39709453_39709812_39709882_39710085_39710202_39710339_39710482_39711927_39712048_39712321_39712449_39715285_39715360_39715445_39715537_39715739_39715940_39716300_39716434_39716514_39716606_39717319_39717481_39719786_39719835_39723318_39723458_39723537_39723661_39723911_39724011_39724725_39724912_39725048_39725205_39725326_39725403_39725706_39725854_39726561_39726660_39726814_39727004_39727294_39727548_39727688
H1_mix_00035975	chr17	+	4341	27	FSM	ENSG00000141736.14	ENST00000541774.5	4341	27	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	316.746751266481	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCACCGGCCTATGTCTGGG	NA	False	NA	24	True	AATATA	-17	NA	39699559	39728662	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39699588_39706989_39707142_39708320_39708535_39709317_39709453_39709812_39709882_39710085_39710202_39710339_39710482_39711927_39712048_39712321_39712449_39715285_39715360_39715445_39715537_39715739_39715940_39716300_39716434_39716514_39716606_39717319_39717481_39719786_39719835_39723318_39723458_39723537_39723661_39723911_39724011_39724725_39724912_39725048_39725205_39725326_39725403_39725706_39725854_39726561_39726660_39726814_39727004_39727294_39727548_39727688
H1_mix_00035976	chr17	+	4539	27	FSM	ENSG00000141736.14	ENST00000578373.5	4523	27	-16	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	320.859155445401	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGTTGTATGGGGAGGC	2	True	NA	28	True	AATAAA	-16	NA	39700063	39728577	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39700312_39706989_39707205_39708320_39708535_39709317_39709453_39709812_39709882_39710085_39710202_39710339_39710482_39711927_39712048_39712321_39712449_39715285_39715360_39715445_39715537_39715739_39715940_39716300_39716434_39716514_39716606_39717319_39717481_39719786_39719835_39723318_39723458_39723537_39723661_39723911_39724011_39724725_39724912_39725048_39725205_39725326_39725403_39725706_39725854_39726561_39726660_39726814_39727004_39727294_39727548_39727688
H1_mix_00035977	chr17	+	4597	27	FSM	ENSG00000141736.14	ENST00000269571.10	4557	27	-40	0	0	0	multi-exon	FALSE	canonical	3	1286	junction_6	165.202892111882	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAGGCACCGGCCTATGTC	2	True	NA	20	True	AATATA	-13	NA	39700023	39728658	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39700312_39706989_39707142_39708320_39708535_39709317_39709453_39709812_39709882_39710085_39710202_39710339_39710482_39711927_39712048_39712321_39712449_39715285_39715360_39715445_39715537_39715739_39715940_39716300_39716434_39716514_39716606_39717319_39717481_39719786_39719835_39723318_39723458_39723537_39723661_39723911_39724011_39724725_39724912_39725048_39725205_39725326_39725403_39725706_39725854_39726561_39726660_39726814_39727004_39727294_39727548_39727688
H1_mix_00035983	chr17	+	948	3	FSM	ENSG00000141738.14	ENST00000485182.5	879	3	-69	0	-47	0	multi-exon	FALSE	canonical	3	59	junction_1	67	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTCAGGTGCATGGAAC	NA	False	NA	NA	False	GGGGCT	-30	NA	39737879	39743054	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39738134_39742251_39742457_39742565
H1_mix_00035984	chr17	+	2244	15	FSM	ENSG00000141738.14	ENST00000309156.9	2233	15	-11	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	37.0427910307382	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGAGTTCTGTCTGGCA	-11	True	NA	24	True	AATAAA	-18	NA	39737926	39747285	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39738134_39742251_39742457_39742565_39742717_39742897_39743055_39743179_39743302_39743392_39743471_39744069_39744208_39744552_39744664_39744885_39744985_39745242_39745324_39745421_39745539_39745727_39745789_39745912_39746001_39746108_39746203_39746750
H1_mix_00035985	chr17	+	2119	15	FSM	ENSG00000141738.14	ENST00000394211.7	2093	15	-26	0	5	0	multi-exon	FALSE	canonical	3	100	junction_1	28.7473157575678	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGAGTTCTGTCTGGCA	349	False	NA	24	True	AATAAA	-18	NA	39738310	39747285	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39738393_39742251_39742457_39742565_39742717_39742897_39743055_39743179_39743302_39743392_39743471_39744069_39744208_39744552_39744664_39744885_39744985_39745242_39745324_39745421_39745539_39745727_39745789_39745912_39746001_39746108_39746203_39746750
H1_mix_00035986	chr17	+	2197	15	FSM	ENSG00000141738.14	ENST00000445327.6	2197	15	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	48.1343782274887	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTGTCTGGCAAGGCCT	12	False	NA	30	True	AATAAA	-24	NA	39738770	39747291	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39738925_39742251_39742457_39742565_39742717_39742897_39743055_39743179_39743302_39743392_39743471_39744069_39744208_39744552_39744664_39744885_39744985_39745242_39745324_39745421_39745539_39745727_39745789_39745912_39746001_39746108_39746203_39746750
H1_mix_00035987	chr17	+	2147	12	FSM	ENSG00000108344.15	ENST00000264639.9	2147	12	0	0	0	0	multi-exon	FALSE	canonical	3	923	junction_3	58.5512419499732	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTGCATCAGTTACTAT	0	True	NA	69	True	AATAAA	-16	NA	39980806	39997959	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39981191_39984293_39984485_39986574_39986713_39988682_39988820_39989738_39989930_39990093_39990198_39994953_39995069_39995175_39995296_39995423_39995528_39996182_39996339_39997329_39997381_39997503
H1_mix_00035989	chr17	+	6173	9	FSM	ENSG00000126351.13	ENST00000450525.7	5204	9	-104	-865	51	0	multi-exon	FALSE	canonical	3	18	junction_6	5.35607132140714	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGTCTGCCTCCTCCCCC	591	False	NA	21	True	CATAAA	-18	NA	40062860	40093867	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_40063093_40074191_40074542_40076870_40076939_40077507_40077609_40083834_40083983_40084609_40084816_40086706_40086854_40088241_40088501_40089205
H1_mix_00035990	chr17	+	2487	10	FSM	ENSG00000126351.13	ENST00000264637.8	2538	10	51	0	51	0	multi-exon	FALSE	canonical	3	18	junction_6	5.18544972870135	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGTCTGCCTCCTCCCCC	591	False	NA	21	True	CATAAA	-18	NA	40062860	40093867	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_40063093_40074191_40074542_40076870_40076939_40077507_40077609_40083834_40083983_40084609_40084816_40086706_40086854_40088241_40088501_40089205_40089334_40093019
H1_mix_00035992	chr17	+	2081	3	FSM	ENSG00000188895.12	ENST00000577454.5	2081	3	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	7	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTTTCAAACAATAAGGA	258	False	NA	NA	False	AATAAA	-14	NA	40122572	40130293	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_40123381_40126182_40126407_40129244
H1_mix_00035993	chr17	+	4853	8	FSM	ENSG00000188895.12	ENST00000578648.5	2267	8	-609	-1977	4	0	multi-exon	FALSE	canonical	3	19	junction_3	29.3494080877629	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTGAACTTCTGCTTC	-2	True	NA	28	True	AATAAA	-15	NA	40121974	40136787	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_40123381_40126182_40126407_40129244_40129628_40132033_40132099_40133041_40133110_40133533_40133659_40133826_40133900_40134278
H1_mix_00035994	chr17	+	4102	14	NNC	ENSG00000108349.17	novel	3890	14	NA	NA	-5	0	intron_retention	FALSE	canonical	3	92	junction_13	135.590708519007	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGGCTCCCTTGCCAG	17	False	NA	11	True	AATAAA	-12	NA	40140312	40172164	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_40140780_40141206_40141235_40141569_40141608_40161752_40161912_40162001_40162154_40162724_40162902_40163480_40164167_40166796_40166862_40167497_40167613_40167849_40167949_40168202_40168418_40169323_40169447_40169597_40169663_40170451
H1_mix_00035995	chr17	+	3890	14	FSM	ENSG00000108349.17	ENST00000264645.12	3890	14	0	0	0	0	multi-exon	FALSE	canonical	3	366	junction_13	71.3226687450987	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCCTTGCCAGTGTTTTG	11	True	NA	18	True	AATAAA	-19	NA	40140536	40172171	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_40140780_40141206_40141235_40141569_40141608_40161752_40161912_40162001_40162154_40162724_40162902_40163480_40164167_40166796_40166862_40167497_40167613_40167849_40167949_40168202_40168418_40169323_40169447_40169597_40169663_40170446
H1_mix_00035999	chr17	+	3596	13	ISM	ENSG00000108352.13	ENST00000620260.6	4243	15	6400	0	2631	0	3prime_fragment	FALSE	canonical	3	29	junction_4	13.5120830699374	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGTTGTTCTCCATT	5956	False	NA	14	True	GATAAA	-14	NA	40183869	40195650	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_40184350_40184580_40184679_40188865_40188979_40189207_40189376_40190433_40190532_40190639_40190763_40191315_40191495_40191581_40191673_40192212_40192264_40192605_40192694_40192925_40192991_40193362_40193418_40193663
H1_mix_00036000	chr17	+	662	3	FSM	ENSG00000108352.13	ENST00000469209.1	662	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	10	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACAATAATGCCTAGCAGA	813	False	NA	NA	False	AATAAA	-10	NA	40189209	40191037	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_40189376_40190433_40190532_40190639
H1_mix_00036003	chr17	+	4564	12	FSM	ENSG00000094804.12	ENST00000209728.9	4564	12	0	0	0	0	multi-exon	FALSE	canonical	3	688	junction_11	66.7073291969859	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGCCACAGATGTTTCT	-24	True	NA	8	True	AATAAA	-19	NA	40287878	40304657	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_40288091_40289407_40289599_40291057_40291340_40291468_40291669_40293455_40293632_40293949_40294057_40294363_40294504_40295355_40295457_40296702_40296768_40300827_40301031_40301467_40301609_40301911
H1_mix_00036006	chr17	+	3133	8	FSM	ENSG00000131759.18	ENST00000394081.7	2285	8	0	-848	0	0	multi-exon	FALSE	canonical	3	35	junction_1	13.0540477732122	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGCCTCCAGCCTTGCT	-13	True	NA	6	True	AATAAA	-16	NA	40342362	40357643	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_40342868_40348315_40348465_40349783_40349926_40351909_40352071_40352330_40352508_40354301_40354507_40355262_40355422_40356008
H1_mix_00036012	chr17	+	989	1	FSM	ENSG00000187272.7	ENST00000254072.7	1006	1	10	7	10	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTCATATAGTGTTTTGT	9	False	NA	NA	False	AATAAA	-15	NA	41238008	41238997	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_41238000_41239000
H1_mix_00036013	chr17	+	1136	3	FSM	ENSG00000173812.11	ENST00000310837.8	1120	3	-16	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	2557	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTTTCAGAAATACCTG	-2	True	NA	16	True	AATAAA	-2	NA	41688884	41691630	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_41689070_41690087_41690190_41690781
H1_mix_00036014	chr17	+	2170	2	FSM	ENSG00000173812.11	ENST00000462917.1	2170	2	0	0	0	0	multi-exon	FALSE	canonical	3	5144	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGACTTGCAGATTATTTA	-2	True	NA	32	True	AATAAA	-18	NA	41688884	41691646	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_41690190_41690781
H1_mix_00036015	chr17	+	2338	4	FSM	ENSG00000173812.11	ENST00000469257.2	2338	4	0	0	0	0	multi-exon	FALSE	canonical	3	4217	junction_1	379.415632548558	2364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTTTGGTGACTTTTT	-2	True	NA	10	True	AATAAA	-17	NA	41688884	41692668	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_41689070_41689777_41689942_41690087_41690190_41690781
H1_mix_00036018	chr17	+	837	4	FSM	ENSG00000141756.19	ENST00000490938.5	837	4	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	19.0262975904404	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCATAGGAGACATGTTCC	378	False	NA	NA	False	NA	NA	NA	41820002	41822293	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_41820462_41820946_41821090_41821653_41821818_41822222
H1_mix_00036019	chr17	+	3192	12	FSM	ENSG00000204815.10	ENST00000377540.6	3146	12	12	-58	-6	58	multi-exon	FALSE	canonical	2	8	junction_2	2.77235466945035	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAACACGCAGAAAAAGCT	-12	True	NA	NA	False	NA	NA	NA	41930628	41966561	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_41930838_41935216_41935349_41935598_41935750_41936472_41936535_41936761_41936928_41938556_41938782_41938964_41939173_41945135_41945223_41949152_41949350_41955216_41955318_41961381_41961467_41964992
H1_mix_00036023	chr17	+	2390	5	FSM	ENSG00000168256.18	ENST00000485789.5	997	5	-17	-1376	-11	0	multi-exon	FALSE	canonical	3	37	junction_3	122.336370307444	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCCCTCCCCTCCCCCTT	2581	False	NA	20	True	AATAAA	-21	NA	42020060	42025641	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42020205_42021563_42021672_42022398_42022473_42022564_42022641_42023653
H1_mix_00036024	chr17	+	1011	5	FSM	ENSG00000168256.18	ENST00000479407.5	992	5	-19	0	-13	0	multi-exon	FALSE	canonical	2	16	junction_3	131.363998112116	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCCCATCAGCGACACACA	2579	False	NA	NA	False	NA	NA	NA	42020058	42024265	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42020205_42021563_42021672_42022398_42022473_42022569_42022641_42023653
H1_mix_00036025	chr17	+	1477	4	FSM	ENSG00000168256.18	ENST00000449471.8	1461	4	-16	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	129.213862345424	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGCAGATGGGCCTCACT	-29	True	NA	NA	False	NA	NA	NA	42020089	42024833	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42020205_42021563_42021672_42022398_42022473_42023653
H1_mix_00036026	chr17	+	2471	4	FSM	ENSG00000168256.18	ENST00000393885.9	2453	4	-18	0	0	0	multi-exon	FALSE	canonical	3	296	junction_2	17.5562587763516	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCCCTCCCCTCCCCCTT	0	True	NA	20	True	AATAAA	-21	NA	42020071	42025641	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42020205_42021563_42021672_42022398_42022641_42023653
H1_mix_00036034	chr17	+	3930	20	NIC	ENSG00000033627.17	novel	4110	21	NA	NA	-4	0	combination_of_known_junctions	TRUE	canonical	3	41	junction_19	66.6462526455145	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCTGCCTGTCACTGTG	-15	True	NA	20	True	AATAAA	-20	NA	42458883	42522578	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_42458964_42460847_42461012_42466428_42466508_42468009_42468108_42470089_42470219_42477638_42477743_42478462_42478590_42480666_42480750_42483037_42483132_42487154_42487368_42490486_42490638_42494333_42494474_42495033_42495189_42495625_42495717_42498923_42499043_42500706_42500924_42501196_42501305_42507519_42507628_42513860_42513979_42521026
H1_mix_00036041	chr17	+	2218	5	NIC	ENSG00000108784.10	novel	2475	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_4	50.9478900446329	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGAGTCCCCTGGGTCT	-11	True	NA	24	True	ATTAAA	-24	NA	42536240	42544449	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_42536656_42537397_42537546_42538338_42538486_42538669_42538756_42543027
H1_mix_00036042	chr17	+	1788	4	FSM	ENSG00000108784.10	ENST00000591587.1	1493	4	-7	-288	0	0	multi-exon	FALSE	canonical	3	30	junction_1	68.9395870793165	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGAGTCCCCTGGGTCT	271	False	NA	24	True	ATTAAA	-24	NA	42536522	42544449	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42536656_42538338_42538486_42538669_42538756_42543027
H1_mix_00036045	chr17	+	2289	10	FSM	ENSG00000266929.1_ENSG00000068120.15	ENST00000421097.6	2071	10	-204	-14	-191	0	multi-exon	FALSE	canonical	3	40	junction_1	152.072351201657	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTTGCTTGTATGGTGT	8293	False	NA	14	True	ATTAAA	-14	NA	42561942	42566274	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42562220_42562611_42563323_42563960_42564176_42564445_42564578_42564708_42564899_42564982_42565048_42565226_42565312_42565470_42565569_42565658_42565806_42565905
H1_mix_00036052	chr17	+	1723	10	FSM	ENSG00000131462.9	ENST00000681947.1	1719	10	-4	0	-4	0	multi-exon	FALSE	canonical	3	1339	junction_8	113.26174209424	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGATATAAATCAAGTCACT	192	False	NA	1	True	AATAAA	-5	NA	42609636	42615224	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42609787_42610107_42610221_42610422_42610591_42612074_42612144_42612426_42612507_42612946_42613074_42613646_42613734_42613848_42613999_42614259_42614658_42614843
H1_mix_00036054	chr17	+	1903	10	FSM	ENSG00000131462.9	ENST00000680678.1	1899	10	-4	0	-4	0	multi-exon	TRUE	canonical	3	1361	junction_7	99.9982715900013	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATAAATCAAGTCACTGC	192	False	NA	3	True	AATAAA	-7	NA	42609636	42615226	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42609787_42610107_42610221_42610422_42610591_42612074_42612144_42612426_42612507_42612946_42613074_42613646_42613734_42613848_42614413_42614495_42614658_42614843
H1_mix_00036056	chr17	+	1620	11	FSM	ENSG00000131462.9	ENST00000251413.8	1608	11	-12	0	0	0	multi-exon	FALSE	canonical	3	1339	junction_8	109.925611210491	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACTGCTCCCTTTAAAGC	-16	True	NA	15	True	AATAAA	-19	NA	42609670	42615238	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42609787_42610107_42610221_42610422_42610591_42612074_42612144_42612426_42612507_42612946_42613074_42613646_42613734_42613848_42613999_42614259_42614413_42614495_42614658_42614843
H1_mix_00036067	chr17	+	1106	6	FSM	ENSG00000131475.7	ENST00000253794.7	1088	6	-18	0	-18	0	multi-exon	FALSE	canonical	3	1101	junction_3	43.4400736647626	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCTGCCTCTTAAATTAC	NA	False	NA	29	True	ATTAAA	-14	NA	42773430	42779599	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42773529_42773732_42773879_42774645_42774700_42775380_42775470_42776244_42776321_42778956
H1_mix_00036069	chr17	+	3380	10	FSM	ENSG00000131467.12	ENST00000541124.5	3366	10	-14	0	-14	0	multi-exon	FALSE	canonical	0	0	junction_6	545.221056086428	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAGCCTTCTGGTTTCCA	12	False	NA	14	True	AATAAA	-23	NA	42833127	42843758	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42833674_42834343_42834377_42834514_42834578_42834771_42834877_42837648_42837698_42838092_42838206_42838944_42839013_42839111_42839167_42839293_42839381_42841497
H1_mix_00036073	chr17	+	6973	6	Fusion	ENSG00000131471.7_ENSG00000131480.9	novel	4011	4	NA	NA	-3098	-3	intron_retention	FALSE	canonical	1	2	junction_3	25.8998069490875	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGGAATTGACTTTTTT	1899	False	NA	3	True	AATAAA	-15	NA	42848085	42858121	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr17_+_42849372_42849600_42849731_42850081_42852944_42854015_42854734_42855443_42855574_42856274
H1_mix_00036074	chr17	+	2257	2	NIC	ENSG00000131480.9	novel	2572	4	NA	NA	3496	0	intron_retention	FALSE	canonical	3	71	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTTACTTGAATTTATT	4	False	NA	NA	False	AATAAA	-12	NA	42848096	42850704	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_42849731_42850081
H1_mix_00036080	chr17	+	670	5	FSM	ENSG00000131469.15	ENST00000589037.5	585	5	-86	1	-86	0	multi-exon	FALSE	canonical	3	79	junction_1	4501.65866653615	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAAAAGCCTGTGTC	NA	False	NA	52	True	ATTAAA	-7	NA	42998186	43002948	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42998416_42998748_42998832_42999932_43000103_43002672_43002784_43002871
H1_mix_00036081	chr17	+	1872	3	FSM	ENSG00000131469.15	ENST00000593262.1	1872	3	0	0	0	0	multi-exon	FALSE	canonical	3	8517	junction_2	1525	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAAAAGCCTGTGTC	-3	True	NA	52	True	ATTAAA	-7	NA	42998418	43002948	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_43000103_43002672_43002784_43002871
H1_mix_00036088	chr17	+	1871	3	ISM	ENSG00000198496.12	ENST00000356906.7	978	4	0	0	0	0	intron_retention	FALSE	canonical	3	36	junction_2	6	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCTGGGTTTTGTGAGC	-9	True	NA	15	True	AATAAA	-22	NA	43125639	43140333	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_43125771_43131207_43131271_43138656
H1_mix_00036089	chr17	+	613	5	NNC	ENSG00000198496.12	novel	1344	5	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_4	17.0953209972788	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGATCCTCCTCAATCC	5	True	NA	-14	True	NA	NA	NA	43125653	43153649	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_43125771_43131207_43131271_43138656_43138923_43140164_43140284_43153601
H1_mix_00036090	chr17	+	4625	21	FSM	ENSG00000188554.15	ENST00000590996.6	4613	21	-12	0	0	0	multi-exon	FALSE	canonical	3	157	junction_11	22.3049321899888	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGGACTGGCTAGTCCTTG	-9	True	NA	28	True	AATAAA	-19	NA	43171201	43211688	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_43171303_43175790_43175902_43177935_43177999_43179393_43179413_43180794_43180818_43186249_43186445_43189041_43189120_43189587_43189803_43190608_43190777_43191371_43191582_43193093_43193254_43193347_43193639_43194349_43194500_43194963_43195040_43196480_43196592_43196941_43197107_43200166_43200609_43201685_43201781_43202654_43202713_43203680_43203787_43209900
H1_mix_00036095	chr17	+	3817	23	FSM	ENSG00000067596.12	ENST00000540306.5	3809	23	-8	0	-5	0	multi-exon	FALSE	canonical	3	17	junction_22	45.6741287060613	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCTGTTTTTAAAATTT	-34	True	NA	11	True	ATTAAA	-13	NA	43483954	43526786	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_43484186_43489448_43489535_43490390_43490464_43491164_43491251_43492182_43492293_43492680_43493041_43493444_43493590_43493682_43493887_43496180_43496269_43498861_43498960_43499955_43500104_43504643_43504826_43507002_43507198_43507502_43507689_43507808_43508020_43508338_43508521_43513361_43513503_43517166_43517323_43520129_43520268_43520750_43520880_43521368_43521566_43522046_43522227_43526495
H1_mix_00036099	chr17	+	1590	6	FSM	ENSG00000141349.9	ENST00000585361.5	1572	6	-18	0	-2	0	multi-exon	FALSE	canonical	3	58	junction_1	315.830080897941	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGCAGCCAGGGCGGCCC	-8	True	NA	-20	True	NA	NA	NA	44070732	44076300	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_44071243_44074159_44074267_44074679_44074771_44074968_44075088_44075309_44075452_44075679
H1_mix_00036105	chr17	+	1937	3	FSM	ENSG00000168591.16	ENST00000357984.7	1921	3	-16	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	50.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCTTTCTGTGACAGAG	-12	True	NA	15	True	AATAAA	-21	NA	44186969	44191730	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_44187110_44189021_44189589_44190500
H1_mix_00036107	chr17	+	2140	3	NIC	ENSG00000168591.16	novel	747	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	32	junction_1	41	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTCTGTGACTGAATAAAG	15	False	NA	-24	True	GGGGCT	-13	NA	44187049	44191691	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_44187432_44189021_44189589_44190500
H1_mix_00036109	chr17	+	2371	4	NIC	ENSG00000168591.16	novel	1580	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	29	junction_2	37.2111094522411	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTCTGTGACTGAATAAAG	-1	True	NA	-24	True	GGGGCT	-13	NA	44187233	44191691	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_44187744_44187906_44188010_44189021_44189589_44190500
H1_mix_00036110	chr17	+	2161	4	FSM	ENSG00000168591.16	ENST00000592825.1	2151	4	-10	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	14.1656862405839	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATTTTGTGGTCCTGCA	27	True	NA	-4	True	AATAAA	-2	NA	44187261	44191711	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_44187744_44187906_44188010_44188934_44189300_44190500
H1_mix_00036114	chr17	+	1613	2	FSM	ENSG00000168591.16	ENST00000587172.1	1598	2	-15	0	-15	0	multi-exon	FALSE	canonical	3	14	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTTTCTGTGACAGAGA	1683	False	NA	16	True	AATAAA	-22	NA	44188917	44191731	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_44189300_44190500
H1_mix_00036115	chr17	+	1191	3	FSM	ENSG00000168591.16	ENST00000587630.1	1191	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	53	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTCTGTGACTGAATAAAG	2135	False	NA	-24	True	GGGGCT	-13	NA	44189369	44191691	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_44189589_44190500_44190887_44191105
H1_mix_00036119	chr17	+	541	6	FSM	ENSG00000030582.18	ENST00000592783.5	541	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	514.291123781074	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGATGGCTCCTGGGGGTG	-1	True	NA	NA	False	NA	NA	NA	44345301	44350304	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_44345335_44345530_44345606_44349157_44349303_44349425_44349552_44349666_44349752_44350227
H1_mix_00036120	chr17	+	2130	13	FSM	ENSG00000030582.18	ENST00000053867.8	2130	13	0	0	0	0	multi-exon	FALSE	canonical	3	669	junction_1	125.616700942015	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCTGATTTGCCGCCC	-1	True	NA	30	True	AATAAA	-19	NA	44345301	44353106	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_44345335_44349157_44349303_44349425_44349552_44349666_44349752_44350227_44350341_44350441_44350578_44350690_44350801_44351036_44351164_44351362_44351461_44351549_44351796_44352014_44352249_44352340_44352572_44352660
H1_mix_00036127	chr17	+	3024	14	FSM	ENSG00000161692.18	ENST00000315005.8	3015	14	-9	0	0	0	multi-exon	FALSE	canonical	2	4	junction_13	17.8448275369219	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATCTTTTATGTCTTTC	10	True	NA	2	True	AATAAA	-16	NA	44708655	44752264	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_44708840_44709303_44709367_44722879_44723023_44729904_44730097_44730964_44731016_44732177_44732266_44734089_44734164_44736829_44736867_44738378_44738425_44741335_44741453_44747082_44747192_44747390_44747516_44748340_44748466_44750594
H1_mix_00036128	chr17	+	4358	12	NNC	ENSG00000161692.18	novel	2998	12	NA	NA	14	-619	intron_retention	FALSE	canonical	3	11	junction_8	15.7101851470749	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGCTCCCACCTTCTGT	33	False	NA	NA	False	AGTAAA	-16	NA	44708678	44751645	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_44708840_44709303_44709367_44722879_44723023_44729904_44730097_44730964_44731016_44734089_44734164_44736829_44736867_44738378_44738425_44741400_44741453_44747082_44747192_44747390_44747516_44748340
H1_mix_00036130	chr17	+	5081	13	ISM	ENSG00000161692.18	ENST00000315005.8	3015	14	63	0	0	0	intron_retention	FALSE	canonical	3	13	junction_5	14.613540144522	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATCTTTTATGTCTTTC	37	False	NA	2	True	AATAAA	-16	NA	44708727	44752264	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_44708840_44709303_44709367_44722879_44723023_44729904_44730097_44730964_44731016_44732177_44732266_44734089_44734164_44736829_44736867_44738378_44738425_44741335_44741453_44747082_44747192_44747390_44747516_44748340
H1_mix_00036132	chr17	+	643	7	FSM	ENSG00000073670.14	ENST00000588363.1	643	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	3.07769755210323	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTTCAACTTCAGCACCT	92	False	NA	NA	False	NA	NA	NA	44775557	44777802	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_44775677_44776126_44776208_44776744_44776796_44776898_44776963_44777165_44777266_44777481_44777602_44777694
H1_mix_00036141	chr17	+	1436	4	FSM	ENSG00000168517.11	ENST00000589230.6	1436	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	33.4697209761633	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGTATCTAGGATTGAT	-23	True	NA	24	True	ATTAAA	-20	NA	45161874	45170035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_45162032_45162487_45162636_45162749_45162860_45169014
H1_mix_00036142	chr17	+	1189	3	FSM	ENSG00000168517.11	ENST00000591576.5	1176	3	-13	0	7	0	multi-exon	FALSE	canonical	3	16	junction_1	41	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGTATCTAGGATTGAT	-16	True	NA	24	True	ATTAAA	-20	NA	45161881	45170035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_45161940_45162749_45162860_45169014
H1_mix_00036151	chr17	+	2226	3	FSM	ENSG00000267278.6	ENST00000586450.6	2296	3	70	0	-41	0	multi-exon	FALSE	canonical	3	8	junction_1	26.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTAAATGTAAGGAAGTGT	7116	False	NA	-2	True	AATAAA	-2	NA	45262149	45269824	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_45262344_45267112_45267329_45268008
H1_mix_00036154	chr17	+	2089	4	FSM	ENSG00000204650.14	ENST00000585118.5	546	4	22	-1565	4	0	multi-exon	FALSE	canonical	3	160	junction_1	56.3461523876199	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTAGCCTAGAGCTCGT	10	True	NA	13	True	AATAAA	-23	NA	45620349	45637959	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_45620373_45621907_45622042_45629903_45630159_45636282
H1_mix_00036155	chr17	+	3623	4	FSM	ENSG00000204650.14	ENST00000455565.5	2609	4	-264	-750	0	750	multi-exon	FALSE	canonical	3	31	junction_1	105.837401496614	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTTCATTGCAATACTG	6	True	NA	NA	False	GATAAA	-41	NA	45620345	45638709	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_45621153_45621907_45622042_45629903_45630159_45636282
H1_mix_00036156	chr17	+	9487	4	FSM	ENSG00000204650.14	ENST00000591271.5	9678	4	10	181	4	-181	multi-exon	TRUE	canonical	3	52	junction_3	96.8813707582629	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGTCTAGCTGCACAGG	10	True	NA	NA	False	NA	NA	NA	45620349	45654975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_45620373_45621907_45622042_45629903_45630159_45645900
H1_mix_00036157	chr17	+	2688	15	FSM	ENSG00000263715.7	ENST00000634540.1	2695	15	2	5	2	-5	multi-exon	FALSE	canonical	0	0	junction_3	80.1834631024505	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGCATTTGTGAAGGCCT	6	True	NA	2	True	TATAAA	-18	NA	45620345	45835821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_45620373_45621907_45622042_45629903_45630159_45807009_45807098_45816462_45816583_45821354_45821441_45829214_45829322_45830093_45830215_45830416_45830571_45830879_45830941_45833137_45833211_45833451_45833538_45833713_45833850_45834006_45834049_45834623
H1_mix_00036158	chr17	+	2558	2	FSM	ENSG00000204650.14	ENST00000578000.5	2458	2	-100	0	-100	0	multi-exon	FALSE	canonical	2	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAACATTTCTCTGAGAGC	NA	False	NA	6	True	AATAAA	-17	NA	45638874	45642300	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_45639521_45640388
H1_mix_00036159	chr17	+	883	2	FSM	ENSG00000204650.14	ENST00000585677.1	654	2	-7	-222	-7	0	multi-exon	FALSE	canonical	3	19	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTCTTTTAGTTTTTC	NA	False	NA	22	True	AGTAAA	-22	NA	45638967	45646230	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_45639521_45645900
H1_mix_00036161	chr17	+	2051	1	FSM	ENSG00000204650.14	ENST00000580655.1	1942	1	27	-136	27	136	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	45640388	45642439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_45640400_45642400
H1_mix_00036165	chr17	+	452	1	FSM	ENSG00000262500.1	ENST00000574657.1	1439	1	-4	991	-4	-991	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCACCTCCACCAACAGC	NA	False	NA	NA	False	NA	NA	NA	46243601	46244053	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_46243600_46244100
H1_mix_00036179	chr17	+	3281	6	FSM	ENSG00000108433.17	ENST00000638838.1	3266	6	-15	0	4	0	multi-exon	TRUE	canonical	3	26	junction_2	97.2386754331835	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGAGGTTTATTTTAT	-22	True	NA	-8	True	NA	NA	NA	46923123	46941336	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_46923222_46929519_46929585_46931101_46931208_46932066_46932200_46935028_46935170_46938598
H1_mix_00036180	chr17	+	3596	6	FSM	ENSG00000108433.17	ENST00000638216.1	3574	6	-22	0	4	0	multi-exon	FALSE	canonical	2	11	junction_1	108.558924091942	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGCTCTGTCACCCAGGC	-22	True	NA	NA	False	TTTAAA	-42	NA	46923123	46941600	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_46923270_46929519_46929585_46931098_46931208_46932066_46932200_46935028_46935170_46938598
H1_mix_00036181	chr17	+	3822	5	FSM	ENSG00000108433.17	ENST00000640608.1	3871	5	49	0	4	0	multi-exon	FALSE	canonical	3	31	junction_4	115.483765092761	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTACCTTAGTCCAAAAAA	-22	True	NA	4	True	AATAAA	-16	NA	46923123	46942015	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_46923222_46929519_46929585_46931098_46931208_46932066_46932200_46938598
H1_mix_00036183	chr17	+	1444	4	FSM	ENSG00000108433.17	ENST00000575949.6	1444	4	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_1	13.4742552876052	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTCCTGGTCATTCTAC	7	True	NA	19	True	AATAAA	-21	NA	46923152	46933267	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_46923222_46929519_46929585_46931098_46931208_46932066
H1_mix_00036184	chr17	+	2197	5	FSM	ENSG00000108433.17	ENST00000640269.1	2190	5	-7	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	120.471988445447	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTGATCTCTGATGGCA	7	True	NA	-6	True	AATACA	-8	NA	46923152	46936801	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_46923270_46929519_46929585_46931098_46931208_46932066_46932200_46935028
H1_mix_00036185	chr17	+	2694	6	FSM	ENSG00000108433.17	ENST00000638374.1	2683	6	-11	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	110.362312407814	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGCAGAGGTGGTTTT	7	True	NA	NA	False	NA	NA	NA	46923152	46940779	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_46923222_46929523_46929585_46931098_46931208_46932066_46932200_46935028_46935170_46938598
H1_mix_00036186	chr17	+	3939	6	FSM	ENSG00000108433.17	ENST00000640051.2	3932	6	-7	0	0	0	multi-exon	FALSE	canonical	3	180	junction_5	48.3503877957561	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTTAGTCCAAAAAAGATTT	7	True	NA	9	True	AATAAA	-21	NA	46923152	46942020	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_46923222_46929519_46929585_46931098_46931208_46932066_46932200_46935028_46935170_46938598
H1_mix_00036190	chr17	+	4310	23	FSM	ENSG00000141279.17	ENST00000322157.9	4309	23	-1	0	-1	0	multi-exon	FALSE	canonical	3	465	junction_7	69.660807482928	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGATTCACTTTATTC	0	True	NA	32	True	AATAAA	-20	NA	47531106	47623276	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_47531556_47545908_47545994_47569416_47569495_47579389_47579512_47582741_47582850_47585499_47585701_47586147_47586245_47586364_47586399_47587229_47587345_47590716_47590882_47591955_47592061_47592484_47592546_47596352_47596463_47599675_47599740_47601607_47601748_47603914_47604050_47605332_47605553_47612459_47612603_47613668_47613726_47618349_47618458_47619008_47619165_47619736_47619785_47621767
H1_mix_00036192	chr17	+	534	6	FSM	ENSG00000141279.17	ENST00000525048.5	534	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	216.896657420072	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAAAGTCCTCACGTTTG	NA	False	NA	NA	False	NA	NA	NA	47601715	47618429	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_47601748_47603914_47604050_47605465_47605553_47612459_47612603_47613668_47613726_47618349
H1_mix_00036195	chr17	+	6203	21	FSM	ENSG00000108424.11	ENST00000540627.5	2989	21	-387	-2827	-387	2	multi-exon	FALSE	canonical	3	21	junction_1	318.893442234236	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGCTGCTTTTTTTTTTT	581	False	NA	26	True	AATAAA	-26	NA	47650808	47685507	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_47651377_47652693_47652877_47656859_47657061_47658507_47658661_47661118_47661179_47663088_47663179_47664158_47664270_47665056_47665159_47668185_47668411_47669677_47669870_47670701_47670833_47673017_47673166_47673489_47673562_47674637_47674783_47676408_47676492_47677019_47677128_47678045_47678190_47678307_47678414_47680019_47680135_47680507_47680670_47682403
H1_mix_00036204	chr17	+	2271	9	NNC	ENSG00000167182.16	novel	3026	7	NA	NA	11	1044	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	52.0498559075815	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGATCCAGGTTCTCTGC	10	True	NA	NA	False	AGTAAA	-17	NA	47896246	47930001	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_47896294_47915311_47915389_47916155_47917131_47922961_47923275_47924918_47925094_47925347_47925542_47927723_47927821_47928935_47929061_47929733
H1_mix_00036206	chr17	+	3678	7	FSM	ENSG00000108439.11	ENST00000641323.1	3657	7	-21	0	3	0	multi-exon	FALSE	canonical	1	2	junction_1	17.4491324203303	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTATCAGCCGTGCACTTT	-53	True	NA	9	True	AATAAA	-2	NA	47941526	47949287	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_47942052_47943305_47943431_47944615_47944716_47945558_47945613_47945860_47945990_47946322_47946394_47946613
H1_mix_00036213	chr17	+	949	5	FSM	ENSG00000108465.15	ENST00000578663.1	949	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	267.731675376673	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCGGACTTAATAAAAGAGG	7410	False	NA	-4	True	NA	NA	NA	47978549	47981741	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_47978727_47978828_47978918_47980592_47980799_47981162_47981335_47981436
H1_mix_00036215	chr17	+	4394	6	FSM	ENSG00000082641.16	ENST00000585291.5	4390	6	-4	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	99.8466824686729	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCACTTTTTCCCCACTTT	-6	True	NA	-1	True	AATAAA	-25	NA	48048358	48061487	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_48048463_48050606_48050820_48051116_48051629_48056385_48056599_48057343_48057503_48058294
H1_mix_00036219	chr17	+	3667	4	FSM	ENSG00000082641.16	ENST00000582155.5	1998	4	-15	-1654	-15	0	multi-exon	FALSE	canonical	3	36	junction_1	114.737381296013	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCACTTTTTCCCCACTTT	87	False	NA	-1	True	AATAAA	-25	NA	48054659	48061487	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_48054762_48056385_48056599_48057343_48057503_48058294
H1_mix_00036220	chr17	+	2068	4	FSM	ENSG00000082641.16	ENST00000583378.5	2051	4	-17	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	124.340929169227	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGGCCGACAGAGGGGAA	102	False	NA	NA	False	NA	NA	NA	48054674	48059936	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_48054762_48056418_48056599_48057343_48057503_48058294
H1_mix_00036223	chr17	+	2992	7	FSM	ENSG00000002919.15	ENST00000359238.7	2992	7	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	13.30935343617	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCACCTCAGTTAATCTA	-8	True	NA	NA	False	NA	NA	NA	48107765	48123601	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_48107839_48112030_48112086_48112573_48112661_48113300_48113402_48118703_48118800_48118973_48119187_48121234
H1_mix_00036227	chr17	+	2216	3	FSM	ENSG00000159199.14	ENST00000513347.1	2214	3	-2	0	0	0	multi-exon	FALSE	canonical	3	1899	junction_1	324	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCCCTGTCTGTGCCTCT	NA	False	NA	35	True	ATTAAA	-15	NA	48892764	48895868	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_48892841_48893408_48895335_48895654
H1_mix_00036228	chr17	+	598	5	FSM	ENSG00000159199.14	ENST00000355938.9	598	5	0	0	0	0	multi-exon	FALSE	canonical	3	1899	junction_1	380.723899302368	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGTCTGTGCCTCTGTC	NA	False	NA	38	True	ATTAAA	-18	NA	48892764	48895871	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_48892841_48893408_48893457_48894371_48894450_48895155_48895335_48895654
H1_mix_00036229	chr17	+	668	5	FSM	ENSG00000159199.14	ENST00000393366.7	646	5	-22	0	0	0	multi-exon	FALSE	canonical	3	426	junction_1	1006.11704090528	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGTCTGTGCCTCTGTC	NA	False	NA	38	True	ATTAAA	-18	NA	48892764	48895871	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_48892911_48893408_48893457_48894371_48894450_48895155_48895335_48895654
H1_mix_00036230	chr17	+	3104	7	FSM	ENSG00000159202.18	ENST00000360943.10	3084	7	-20	0	-20	0	multi-exon	FALSE	canonical	3	479	junction_1	23.4236347876812	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGAAGTGCCTGTGGGTG	17	False	NA	8	True	AATAAA	-17	NA	48908386	48929056	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_48908821_48910807_48910881_48912833_48913022_48916075_48916188_48921159_48921273_48922846_48922938_48926963
H1_mix_00036232	chr17	+	8733	15	NNC	ENSG00000159217.10	novel	8796	15	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	canonical	3	203	junction_10	261.323944715429	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTCTGTGTCTCAGGGT	-25	True	NA	23	True	AATAAA	-24	NA	48997444	49056145	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_48997921_48999108_48999170_49025617_49025667_49026465_49026518_49031909_49031974_49038167_49038450_49039956_49040092_49041377_49041501_49042241_49042378_49043427_49043551_49043969_49044087_49044990_49045066_49045889_49046022_49046259_49046374_49049351
H1_mix_00036241	chr17	+	2616	9	NIC	ENSG00000136504.13	novel	912	8	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	173	junction_1	87.1460699056475	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTTCATCTGGGGGCT	-4	True	NA	19	True	AATAAA	-18	NA	49815036	49829096	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_49815075_49815802_49815914_49817819_49818012_49821336_49821427_49821649_49821791_49823201_49823296_49825999_49826147_49826692_49826800_49827400
H1_mix_00036246	chr17	+	865	4	FSM	ENSG00000005882.12	ENST00000505897.5	865	4	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_3	16.5730705262081	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTGTTGTTTAGAGTTT	13	True	NA	NA	False	TATAAA	-22	NA	50095386	50106368	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_50095554_50097422_50097565_50105370_50105443_50105884
H1_mix_00036251	chr17	+	1369	3	ISM	ENSG00000154920.15	ENST00000393271.6	2354	9	21	4861	-1	405	5prime_fragment	FALSE	canonical	3	84	junction_1	8	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGAAAAATCACCCCCGGT	5	True	NA	NA	False	AATAAA	-34	NA	50373240	50376598	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_50373278_50375184_50375984_50376065
H1_mix_00036255	chr17	+	1438	2	FSM	ENSG00000154920.15	ENST00000507616.1	1438	2	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGGAGCTTGGAGGAAG	804	False	NA	12	True	AATAAA	-16	NA	50379758	50381457	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_50380502_50380762
H1_mix_00036261	chr17	+	618	4	FSM	ENSG00000006282.21	ENST00000505085.5	628	4	10	0	10	0	multi-exon	FALSE	canonical	0	0	junction_2	45.3896708758967	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGCTCCCACCTTCCCT	8353	False	NA	NA	False	AAAACA	-19	NA	50547138	50548618	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_50547286_50547719_50547955_50548282_50548454_50548553
H1_mix_00036263	chr17	+	2642	17	FSM	ENSG00000006282.21	ENST00000006658.11	2634	17	-8	0	5	0	multi-exon	FALSE	canonical	3	41	junction_1	19.2295955170669	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGGGCCTCAGCTTTGC	-14	True	NA	11	True	AATAAA	-22	NA	50547165	50555852	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_50547286_50547719_50547768_50548282_50548454_50548553_50548619_50548809_50548965_50549042_50549187_50549285_50549488_50549984_50550116_50550207_50550313_50550535_50550611_50550707_50550918_50550997_50551191_50551510_50551680_50551968_50552181_50554250_50554451_50555231_50555313_50555491
H1_mix_00036264	chr17	+	570	4	FSM	ENSG00000006282.21	ENST00000508598.5	570	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	44.996296143868	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGCCAGGAAGGAAAACAA	25	True	NA	NA	False	NA	NA	NA	50547204	50548581	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_50547286_50547664_50547955_50548282_50548454_50548553
H1_mix_00036268	chr17	+	3914	11	FSM	ENSG00000108848.16	ENST00000393227.6	2284	11	-697	-933	-663	0	multi-exon	FALSE	canonical	3	176	junction_10	157.826772126911	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGACTAAGTGGGATTTCA	NA	False	NA	7	True	ATTAAA	-19	NA	50718901	50752550	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651_50744814_50745719_50746004_50746541_50746703_50750500_50750642_50750746
H1_mix_00036269	chr17	+	2046	11	NIC	ENSG00000108848.16	novel	1972	11	NA	NA	-2	0	intron_retention	FALSE	canonical	3	132	junction_10	170.21753728685	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTTAGCCTTTGGATTT	NA	False	NA	-30	True	NA	NA	NA	50719562	50752585	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651_50744814_50745719_50746004_50746541_50746703_50750500_50750853_50752199
H1_mix_00036270	chr17	+	6987	10	FSM	ENSG00000108848.16	ENST00000505658.6	6987	10	0	0	0	0	multi-exon	FALSE	canonical	3	579	junction_7	59.5572139072595	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGGTGTAGGTAGTTAC	-10	True	NA	32	True	AATAAA	-26	NA	50719602	50756219	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651_50744814_50745719_50746004_50746541_50746703_50750500
H1_mix_00036271	chr17	+	864	7	FSM	ENSG00000108848.16	ENST00000504563.6	840	7	-24	0	5	0	multi-exon	FALSE	canonical	3	62	junction_3	282.518091849393	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGGTCCACAACGTCGGT	NA	False	NA	NA	False	ATTAAA	-17	NA	50719574	50743792	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_50719832_50736959_50737027_50737286_50737480_50740305_50740346_50741101_50741247_50741656_50741732_50743705
H1_mix_00036272	chr17	+	1978	11	FSM	ENSG00000108848.16	ENST00000240304.5	1972	11	-6	0	0	0	multi-exon	FALSE	canonical	3	483	junction_10	79.0364472885769	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAGTCCCCTGTTTTAAA	-16	True	NA	23	True	AATAAA	-14	NA	50719596	50752709	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651_50744814_50745719_50746004_50746541_50746703_50750500_50750695_50752199
H1_mix_00036279	chr17	+	890	5	FSM	ENSG00000239672.8	ENST00000393196.8	890	5	0	0	0	0	multi-exon	FALSE	canonical	3	2690	junction_1	327.113512408155	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGGCATTCTTTGCCTGC	-36	True	NA	160	True	TATAAA	-29	NA	51153558	51162168	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_51153663_51155650_51155781_51159979_51160082_51161159_51161273_51161727
H1_mix_00036280	chr17	+	1021	8	FSM	ENSG00000011052.21	ENST00000393193.6	1021	8	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_4	2348.45255173595	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	-5	True	NA	26	True	AATAAA	-17	NA	51153589	51171744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_51153663_51155650_51155781_51159979_51160082_51161159_51161273_51166826_51166957_51168241_51168344_51169936_51170050_51171486
H1_mix_00036281	chr17	+	1041	5	FSM	ENSG00000243678.12	ENST00000514264.6	850	5	-322	131	-322	0	multi-exon	FALSE	canonical	3	54	junction_1	2863.09788515866	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACAGCAGTCTCCTTCAG	3904	False	NA	NA	False	NA	NA	NA	51165112	51171613	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_51165682_51166826_51166957_51168241_51168344_51169936_51170050_51171486
H1_mix_00036282	chr17	+	701	5	FSM	ENSG00000243678.12	ENST00000513177.5	692	5	-9	0	-9	0	multi-exon	FALSE	canonical	3	52	junction_1	2863.95500139231	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGTCTCCTTGTGCTTA	262	False	NA	25	True	AATAAA	-16	NA	51165805	51171743	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_51165905_51166826_51166957_51168241_51168344_51169936_51170050_51171486
H1_mix_00036283	chr17	+	690	5	FSM	ENSG00000243678.12	ENST00000512737.6	690	5	0	0	0	0	multi-exon	FALSE	canonical	3	4509	junction_1	993.013941241511	2062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	-2	True	NA	26	True	AATAAA	-17	NA	51166410	51171744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_51166498_51166826_51166957_51168241_51168344_51169936_51170050_51171486
H1_mix_00036284	chr17	+	577	4	FSM	ENSG00000243678.12	ENST00000393183.7	568	4	-9	0	0	0	multi-exon	FALSE	canonical	3	209	junction_3	2544.70971931094	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	-2	True	NA	26	True	AATAAA	-17	NA	51166410	51171744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_51166498_51166826_51166957_51168241_51168344_51171486
H1_mix_00036285	chr17	+	1217	5	FSM	ENSG00000243678.12	ENST00000503064.5	749	5	-468	0	135	0	multi-exon	TRUE	canonical	3	370	junction_1	2727.74421454798	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	93	False	NA	26	True	AATAAA	-17	NA	51165949	51171744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_51166564_51166826_51166957_51168241_51168344_51169936_51170050_51171486
H1_mix_00036286	chr17	+	866	4	FSM	ENSG00000243678.12	ENST00000393190.4	866	4	0	0	0	0	multi-exon	FALSE	canonical	3	6260	junction_3	473.063068381655	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	76	False	NA	26	True	AATAAA	-17	NA	51166563	51171744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_51166957_51168241_51168344_51169936_51170050_51171486
H1_mix_00036296	chr17	+	1872	10	FSM	ENSG00000141198.16	ENST00000575333.5	1849	10	-23	0	0	0	multi-exon	FALSE	canonical	3	419	junction_1	38.7011340632	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGTTTTCTTAGAACT	-10	True	NA	14	True	AGTAAA	-20	NA	54900833	54938033	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_54900924_54903707_54903793_54905488_54905568_54912665_54912816_54913747_54913874_54914638_54914744_54915745_54915863_54930072_54930207_54936648_54936710_54937108
H1_mix_00036297	chr17	+	2186	16	FSM	ENSG00000141198.16	ENST00000575882.6	2168	16	-18	0	0	0	multi-exon	FALSE	canonical	3	273	junction_15	88.9094420682578	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATACTTTTTTTTTTTA	-10	True	NA	8	True	AATAAA	-16	NA	54900833	54961956	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_54900924_54903707_54903793_54905488_54905568_54912665_54912816_54913747_54913874_54914638_54914744_54915745_54915863_54930072_54930207_54936648_54936710_54937108_54937227_54938923_54939021_54947260_54947313_54949517_54949624_54950044_54950127_54960565_54960628_54961234
H1_mix_00036303	chr17	+	2750	6	FSM	ENSG00000141179.14	ENST00000576183.5	2680	6	-70	0	-60	0	multi-exon	FALSE	canonical	3	22	junction_5	66.5540381945378	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTACTTGTCCTGTGTAC	8	True	NA	18	True	AATAAA	-11	NA	55750990	55777368	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_55751245_55767334_55767453_55771105_55771186_55773723_55773896_55774791_55774860_55775310
H1_mix_00036304	chr17	+	982	6	FSM	ENSG00000141179.14	ENST00000573500.5	919	6	-71	8	-28	-8	multi-exon	FALSE	canonical	3	15	junction_5	69.3195499119837	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGCCCTCTTGGAGCTC	-22	True	NA	NA	False	AATAAA	-12	NA	55751022	55823082	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_55751245_55767334_55767453_55771105_55771186_55773723_55773896_55774791_55774860_55822760
H1_mix_00036305	chr17	+	1972	6	FSM	ENSG00000141179.14	ENST00000268896.10	1972	6	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_5	24.5226425982193	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCTGTGTACCACTTC	6	True	NA	24	True	AATAAA	-17	NA	55751050	55777374	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_55751245_55767334_55767453_55771105_55771186_55773723_55773896_55774791_55774860_55776034
H1_mix_00036306	chr17	+	1858	6	FSM	ENSG00000141179.14	ENST00000325214.10	1856	6	-2	0	-2	0	multi-exon	FALSE	canonical	3	13	junction_1	64.8919101275344	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCTGTGTACCACTTC	11	False	NA	24	True	AATAAA	-17	NA	55751397	55777374	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_55751478_55767334_55767453_55771105_55771186_55773723_55773896_55774791_55774860_55776034
H1_mix_00036315	chr17	+	1775	10	FSM	ENSG00000153944.12	ENST00000322684.7	1860	10	85	0	0	0	multi-exon	TRUE	canonical	1	1	junction_9	4.7557632353406	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATTGGTTAGTTTCCTT	70	False	NA	NA	False	ATTAAA	-13	NA	57257097	57632900	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_57257139_57257465_57257548_57258269_57258355_57262150_57262193_57401378_57401472_57529675_57529725_57596867_57596951_57615969_57616085_57627228_57627304_57631790
H1_mix_00036324	chr17	+	1296	9	FSM	ENSG00000108384.15	ENST00000337432.9	2562	9	-18	1284	8	0	multi-exon	FALSE	canonical	3	58	junction_8	7.36439916082772	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATCCAGATCATATGAAG	-18	True	NA	6	True	AATAAA	-17	NA	58692583	58734327	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_58692789_58694930_58695190_58696692_58696860_58703195_58703330_58709858_58709991_58720745_58720813_58724039_58724101_58732483_58732545_58734117
H1_mix_00036325	chr17	+	580	2	FSM	ENSG00000108384.15	ENST00000421782.3	567	2	-13	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTACTTCATTATCC	13	True	NA	7	True	ATTAAA	-18	NA	58692614	58695336	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_58692789_58694930
H1_mix_00036339	chr17	+	8369	32	FSM	ENSG00000141367.12	ENST00000269122.8	8369	32	0	0	0	0	multi-exon	FALSE	canonical	3	1075	junction_7	157.724281616517	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACCTGGAGACAAAATTT	-19	True	NA	NA	False	TATAAA	-3	NA	59619894	59696956	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_59620174_59644275_59644484_59647397_59647667_59648239_59648402_59651202_59651317_59655853_59656028_59660390_59660589_59661442_59661644_59663841_59663995_59664786_59664910_59666102_59666241_59666479_59666645_59666796_59666978_59668776_59668941_59673646_59673773_59674700_59674844_59676953_59677189_59679396_59679520_59680911_59681058_59681294_59681479_59681646_59681840_59682270_59682429_59682628_59682794_59682906_59683015_59683094_59683263_59683386_59683537_59683624_59683757_59683874_59683986_59685055_59685227_59685586_59685809_59690635_59690712_59693727
H1_mix_00036341	chr17	+	3692	12	FSM	ENSG00000062716.13	ENST00000262291.9	3686	12	-6	0	0	0	multi-exon	TRUE	canonical	3	578	junction_5	35.5841454156016	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTATAAGTCTCATTTT	-31	True	NA	5	True	AATAAA	-36	NA	59707647	59842255	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_59707749_59731420_59731523_59735337_59735474_59737452_59737544_59738836_59738948_59764970_59765139_59773753_59773886_59808795_59808877_59811669_59811787_59817711_59817774_59838294_59838398_59839767
H1_mix_00036343	chr17	+	4374	1	FSM	ENSG00000062716.13	ENST00000592790.1	4325	1	-119	70	-43	-70	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAAGTGGATGGTTTGGT	252	False	NA	-65	True	NA	NA	NA	59837811	59842185	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_59837800_59842200
H1_mix_00036350	chr17	+	3541	24	FSM	ENSG00000141376.23	ENST00000407086.8	3517	24	-24	0	-21	0	multi-exon	TRUE	canonical	3	29	junction_9	13.4127439893279	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGAGTTGCTGGGGTAA	-35	True	NA	13	True	AATAAA	-22	NA	60677826	61392831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_60677915_60679452_60679541_60683981_60684037_60689685_60689762_60709218_60709326_60747197_60747280_60808003_60808077_60868575_60868684_60874661_60874739_60889694_60889772_60902619_60902704_60910531_60910703_60924406_60924501_60947218_60947353_60989970_60990236_61015750_61015902_61034665_61034791_61037888_61038055_61040791_61040893_61074919_61075021_61078332_61078530_61084466_61084565_61368326_61368495_61391976
H1_mix_00036351	chr17	+	3684	26	FSM	ENSG00000141376.23	ENST00000589222.5	3673	26	-11	0	-7	0	multi-exon	FALSE	canonical	3	12	junction_23	16.9732024085026	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGAGTTGCTGGGGTAA	-21	True	NA	13	True	AATAAA	-22	NA	60677840	61392831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_60677915_60679452_60679541_60683981_60684037_60689685_60689762_60709218_60709326_60747197_60747280_60808003_60808077_60868575_60868684_60874661_60874739_60889694_60889772_60902619_60902704_60910531_60910703_60924406_60924501_60947218_60947353_60989970_60990236_61015750_61015902_61034665_61034791_61037888_61038055_61040791_61040893_61074919_61075021_61078332_61078530_61084466_61084565_61368326_61368495_61380505_61380572_61388617_61388709_61391976
H1_mix_00036353	chr17	+	2948	16	FSM	ENSG00000141376.23	ENST00000588874.5	2948	16	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_1	13.2648239926339	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTGAGTTGCTGGGGTA	NA	False	NA	12	True	AATAAA	-21	NA	60887049	61392830	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_60887212_60889694_60889772_60902619_60902704_60910531_60910703_60924406_60924501_60947218_60947353_60989970_60990236_61015750_61015902_61034665_61034791_61037888_61038055_61040791_61040893_61074919_61075021_61078332_61078530_61084466_61084565_61368326_61368495_61391976
H1_mix_00036355	chr17	+	742	1	FSM	ENSG00000200842.1	ENST00000363972.1	113	1	-653	24	-653	-24	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGCATATGTGACTAGTC	NA	False	NA	NA	False	NA	NA	NA	62036179	62036921	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_62036200_62036900
H1_mix_00036356	chr17	+	1555	8	FSM	ENSG00000087995.16	ENST00000333483.14	1556	8	1	0	1	0	multi-exon	TRUE	canonical	3	255	junction_7	24.5755810444732	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAATAAAAATAAAAAATA	NA	False	NA	-15	True	NA	NA	NA	62423875	62448914	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_62424311_62426298_62426655_62427787_62427838_62435231_62435293_62440616_62440757_62444836_62444944_62447700_62447767_62448574
H1_mix_00036359	chr17	+	5640	22	FSM	ENSG00000146872.19	ENST00000346027.10	5640	22	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	67.2455479479561	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCAGCCTCTTGATTTG	NA	False	NA	9	True	ATTAAA	-20	NA	62478824	62615481	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_62479291_62481120_62481207_62520772_62520845_62522203_62522274_62523133_62523178_62524235_62524332_62536169_62536338_62552301_62552398_62553662_62553756_62560015_62560127_62565000_62565138_62573214_62573368_62576708_62576776_62578476_62578575_62580110_62580193_62586134_62586227_62596584_62596675_62600650_62600821_62602041_62602181_62606129_62606242_62608040_62608149_62612391
H1_mix_00036360	chr17	+	5611	22	NIC	ENSG00000146872.19	novel	5640	22	NA	NA	26	0	combination_of_known_junctions	FALSE	canonical	3	103	junction_5	64.5740623145975	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCAGCCTCTTGATTTG	NA	False	NA	9	True	ATTAAA	-20	NA	62478850	62615481	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_62479291_62481123_62481207_62520772_62520845_62522203_62522274_62523133_62523178_62524235_62524332_62536169_62536338_62552301_62552398_62553662_62553756_62560015_62560127_62565000_62565138_62573214_62573368_62576708_62576776_62578476_62578575_62580110_62580193_62586134_62586227_62596584_62596675_62600650_62600821_62602041_62602181_62606129_62606242_62608040_62608149_62612391
H1_mix_00036361	chr17	+	5307	21	FSM	ENSG00000146872.19	ENST00000343388.11	3227	21	-125	-1955	0	0	multi-exon	FALSE	canonical	3	99	junction_1	53.5259516496437	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAAGAAGGATATTAAAAT	78	False	NA	-28	True	ATTAAA	-43	NA	62479024	62615444	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_62479291_62481120_62481207_62520772_62520845_62522203_62522274_62523133_62523178_62536169_62536338_62552301_62552398_62553662_62553756_62560015_62560127_62565000_62565138_62573214_62573368_62576708_62576776_62578476_62578575_62580110_62580193_62586134_62586227_62596584_62596675_62600650_62600821_62602041_62602181_62606129_62606242_62608040_62608149_62612391
H1_mix_00036362	chr17	+	5405	23	FSM	ENSG00000146872.19	ENST00000683536.1	5405	23	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	92.0792081770494	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAAGAAGGATATTAAAAT	50	False	NA	-28	True	ATTAAA	-43	NA	62479168	62615444	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_62479291_62481120_62481207_62508407_62508554_62520772_62520845_62522203_62522274_62523133_62523178_62524235_62524332_62536169_62536338_62552301_62552398_62553662_62553756_62560015_62560127_62565000_62565138_62573214_62573368_62576708_62576776_62578476_62578575_62580110_62580193_62586134_62586227_62596584_62596675_62600650_62600821_62602041_62602181_62606129_62606242_62608040_62608149_62612391
H1_mix_00036373	chr17	+	1388	8	FSM	ENSG00000136485.16	ENST00000431926.7	1627	8	239	0	-5	0	multi-exon	FALSE	canonical	3	95	junction_7	85.5216883817986	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTTGTGACGAATTC	-21	True	NA	44	True	AATAAA	-27	NA	63550460	63594279	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_63550816_63578469_63578629_63579336_63579449_63579824_63579944_63583501_63583712_63585210_63585329_63588999_63589238_63594202
H1_mix_00036380	chr17	+	4216	19	FSM	ENSG00000198231.14	ENST00000583590.5	4148	19	-21	-47	0	47	multi-exon	TRUE	canonical	3	13	junction_1	113.435153063842	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGTGCCGCACACAGTGT	61	False	NA	58	True	NA	NA	NA	63773862	63819364	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_63774092_63774188_63774377_63787033_63787271_63792411_63792563_63798037_63798100_63799588_63799626_63800467_63800618_63805070_63805176_63806534_63806655_63807723_63807901_63808819_63808949_63809559_63809660_63810512_63810561_63811075_63811174_63811931_63812209_63813227_63813455_63815562_63815674_63816867_63816967_63817693
H1_mix_00036382	chr17	+	4006	18	FSM	ENSG00000198231.14	ENST00000389924.7	3959	18	0	-47	0	47	multi-exon	FALSE	canonical	3	365	junction_5	51.2158063836684	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGTGCCGCACACAGTGT	-8	True	NA	58	True	NA	NA	NA	63774169	63819364	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_63774377_63787033_63787271_63792411_63792563_63798037_63798100_63799588_63799626_63800467_63800618_63805070_63805176_63806534_63806655_63807723_63807901_63808819_63808949_63809559_63809660_63810512_63810561_63811075_63811174_63811931_63812209_63813227_63813455_63815562_63815674_63816867_63816967_63817693
H1_mix_00036393	chr17	+	1680	12	FSM	ENSG00000087191.13	ENST00000578570.5	1680	12	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	521.637472669058	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTAGGACTCCAGTCTGT	13	False	NA	24	True	AATAAA	-17	NA	63827489	63832018	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_63827924_63828137_63828210_63829493_63829564_63829851_63829950_63830132_63830190_63830270_63830502_63830808_63830936_63831035_63831227_63831326_63831426_63831505_63831617_63831723_63831811_63831915
H1_mix_00036394	chr17	+	1474	11	FSM	ENSG00000087191.13	ENST00000581882.5	1474	11	0	0	0	0	multi-exon	FALSE	canonical	3	1574	junction_6	147.746708931198	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCTCTCCAATAAAGCTC	159	False	NA	-8	True	AAGAAA	-30	NA	63827877	63831986	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_63828210_63829493_63829564_63829851_63829950_63830132_63830190_63830270_63830502_63830808_63830936_63831035_63831227_63831326_63831426_63831505_63831617_63831723_63831811_63831915
H1_mix_00036401	chr17	+	2756	20	FSM	ENSG00000258890.8	ENST00000556440.7	2754	20	-2	0	0	0	multi-exon	FALSE	canonical	2	42	junction_4	53.3092685782078	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTATTGCTTTTGAATTTA	-16	True	NA	12	True	AATAAA	-16	NA	64506974	64537946	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_64507117_64508591_64508721_64510172_64510281_64514247_64514359_64516722_64516829_64519320_64519437_64521401_64521528_64522701_64522896_64525769_64525883_64526070_64526201_64527110_64527265_64529287_64529428_64530925_64531019_64531889_64532023_64532838_64533009_64533116_64533192_64534584_64534738_64536601_64536749_64537040_64537113_64537602
H1_mix_00036407	chr17	+	2751	3	FSM	ENSG00000108370.17	ENST00000638125.1	2736	3	-15	0	-15	0	multi-exon	FALSE	canonical	3	97	junction_2	11	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTGATTTCGTTGATT	-6	True	NA	16	True	TATAAA	-19	NA	65100796	65113130	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_65101043_65101206_65101297_65110715
H1_mix_00036413	chr17	+	525	2	NNC	ENSG00000285877.1	novel	2511	5	NA	NA	1652	-15050	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCATGGTGGTGCGTGCC	1102	False	NA	NA	False	ATTAAA	-16	NA	67245933	67258453	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_67245969_67257963
H1_mix_00036415	chr17	+	6263	9	FSM	ENSG00000154217.16	ENST00000581322.6	6241	9	-22	0	-22	0	multi-exon	FALSE	canonical	1	21	junction_3	100.294488258329	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCAAGCGTAGCTTCCTC	0	True	NA	8	True	AATAAA	-17	NA	67377258	67697256	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_67378203_67532801_67532951_67552256_67552346_67553609_67553618_67578185_67578258_67632142_67632239_67669507_67669664_67675478_67675543_67692571
H1_mix_00036421	chr17	+	10607	31	FSM	ENSG00000171634.19	ENST00000342579.8	10607	31	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	80.0101382464886	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTGTACGTAATAGGAC	338	False	NA	-50	True	AATAGA	-44	NA	67826032	67984317	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_67826338_67853939_67854763_67866463_67866688_67874816_67875021_67875555_67875745_67886127_67886317_67891843_67892035_67893369_67893726_67894033_67894166_67903788_67903919_67904701_67904841_67909581_67909762_67910876_67913188_67918713_67918839_67920014_67920144_67922839_67922991_67924546_67924590_67928354_67928602_67929335_67929488_67931910_67932020_67940438_67940657_67944149_67944373_67945408_67945897_67947725_67947809_67948080_67948307_67959540_67959876_67963332_67963507_67964211_67964405_67966571_67966657_67975771_67975959_67982251
H1_mix_00036423	chr17	+	7819	25	NNC	ENSG00000171634.19	novel	8295	30	NA	NA	-30	-314	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_5	80.4497341339437	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTTGTGATTGTCCTTT	417	False	NA	17	True	AGTAAA	-19	NA	67826111	67960063	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_67826338_67853939_67854763_67866463_67866688_67874816_67875021_67886127_67886317_67891846_67892035_67893369_67893726_67894033_67894166_67903788_67903919_67904701_67904841_67909581_67909762_67910876_67913188_67918713_67918839_67920014_67920144_67922839_67922991_67924546_67924590_67928354_67928602_67929335_67929488_67931910_67932020_67940438_67940657_67944149_67944373_67945408_67945897_67947725_67947809_67948080_67948307_67959540
H1_mix_00036424	chr17	+	8951	32	NIC	ENSG00000171634.19	novel	10607	31	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_5	84.7193444598245	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGACTTTCTGGACTTTA	417	False	NA	15	True	AATAAA	-16	NA	67826111	67981762	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_67826338_67853939_67854763_67866463_67866688_67874816_67875021_67875555_67875745_67886127_67886317_67891843_67892035_67893369_67893726_67894033_67894166_67903788_67903919_67904701_67904841_67909581_67909762_67910876_67913188_67918713_67918839_67920014_67920144_67922839_67922991_67924546_67924590_67928354_67928602_67928958_67929121_67929335_67929488_67931910_67932020_67940438_67940657_67944149_67944373_67945408_67945897_67947725_67947809_67948080_67948307_67959540_67959876_67963332_67963507_67964211_67964405_67966571_67966657_67975771_67975959_67981435
H1_mix_00036425	chr17	+	11935	32	NIC	ENSG00000171634.19	novel	11036	31	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_5	85.9206249868269	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTGTACGTAATAGGAC	417	False	NA	-50	True	AATAGA	-44	NA	67826111	67984317	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_67826338_67853939_67854763_67866463_67866688_67874816_67875021_67875555_67875745_67886127_67886317_67891843_67892035_67893369_67893726_67894033_67894166_67903788_67903919_67904701_67904841_67909581_67909762_67910876_67913188_67918713_67918839_67920014_67920144_67922839_67922991_67924546_67924590_67928354_67928602_67928958_67929121_67929335_67929488_67931910_67932020_67940438_67940657_67944149_67944373_67945408_67946326_67947725_67947809_67948080_67948307_67959540_67959876_67963332_67963507_67964211_67964405_67966571_67966657_67975771_67975959_67981435
H1_mix_00036426	chr17	+	8295	30	FSM	ENSG00000171634.19	ENST00000424123.7	8295	30	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	80.4073605991738	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCAGCGTGTTAACCTAA	17	False	NA	NA	False	NA	NA	NA	67826141	67982288	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_67826338_67853939_67854763_67866463_67866688_67874816_67875021_67875555_67875745_67886127_67886317_67891843_67892035_67893369_67893726_67894033_67894166_67903788_67903919_67904701_67904841_67909581_67909762_67910876_67913188_67918713_67918839_67920014_67920144_67922839_67922991_67924546_67924590_67928354_67928602_67929335_67929488_67931910_67932020_67940438_67940657_67944149_67944373_67945408_67945897_67947725_67947809_67948080_67948307_67959540_67959876_67964211_67964405_67966571_67966657_67975771_67975959_67982251
H1_mix_00036429	chr17	+	1951	6	FSM	ENSG00000171634.19	ENST00000580465.5	1951	6	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_3	39.4593461679233	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTCAAAGTTTCCACT	NA	False	NA	16	True	ATTAAA	-16	NA	67940562	67960377	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_67940657_67944149_67944373_67945408_67945897_67947725_67947809_67948080_67948307_67959540
H1_mix_00036433	chr17	+	1999	11	FSM	ENSG00000182481.10	ENST00000330459.8	1977	11	-22	0	0	0	multi-exon	FALSE	canonical	3	4203	junction_6	342.90495767778	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCCTATGTGTTGCTTT	4	True	NA	20	True	AATAAA	-30	NA	68035712	68046854	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_68035841_68037109_68037208_68037357_68037496_68040677_68040767_68042084_68042354_68042904_68043000_68043099_68043364_68043837_68044072_68044320_68044504_68045771_68045922_68046503
H1_mix_00036434	chr17	+	3060	10	FSM	ENSG00000182481.10	ENST00000677419.1	3043	10	-17	0	0	0	multi-exon	FALSE	canonical	3	4203	junction_5	361.223469699476	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTAATCCCAGCTACTCA	4	True	NA	NA	False	AGTAAA	-43	NA	68035712	68047364	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_68035841_68037109_68037208_68037357_68037496_68040677_68040767_68042084_68043000_68043099_68043364_68043837_68044072_68044320_68044504_68045771_68045922_68046503
H1_mix_00036435	chr17	+	2758	10	FSM	ENSG00000182481.10	ENST00000676902.1	2741	10	-17	0	0	0	multi-exon	FALSE	canonical	3	4203	junction_6	324.985127864851	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTAATCCCAGCTACTCA	4	True	NA	NA	False	AGTAAA	-43	NA	68035712	68047364	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_68035841_68037109_68037208_68037357_68037496_68040677_68040767_68042084_68042354_68042904_68043000_68043099_68043364_68043837_68044504_68045771_68045922_68046503
H1_mix_00036436	chr17	+	2432	11	FSM	ENSG00000182481.10	ENST00000537025.6	2456	11	24	0	24	0	multi-exon	TRUE	canonical	0	0	junction_1	1410.71476918617	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGACTTCACCATGCCT	189	False	NA	8	True	AATAAA	-18	NA	68035983	68046842	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_68036557_68037109_68037208_68037357_68037496_68040677_68040767_68042084_68042354_68042904_68043000_68043099_68043364_68043837_68044072_68044320_68044504_68045771_68045922_68046503
H1_mix_00036437	chr17	+	4120	5	FSM	ENSG00000182481.10	ENST00000583392.2	4097	5	-23	0	-23	0	multi-exon	FALSE	canonical	3	4203	junction_3	126.430811118176	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTGACTTCACCATGC	4084	False	NA	6	True	AATAAA	-16	NA	68040277	68046840	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_68040767_68042084_68042354_68042904_68043000_68043099_68043364_68043837
H1_mix_00036442	chr17	+	1378	8	FSM	ENSG00000196704.14	ENST00000392720.6	1378	8	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	213.972914555243	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTTCTCATCTTACTGG	-28	True	NA	19	True	AATAAA	-16	NA	68248042	68257154	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_68248087_68248639_68248706_68250187_68250471_68250793_68250968_68251049_68251179_68254403_68254568_68255699_68255877_68256813
H1_mix_00036443	chr17	+	1940	7	FSM	ENSG00000196704.14	ENST00000359904.8	1932	7	-36	28	3	0	multi-exon	FALSE	canonical	3	727	junction_3	37.5972812255827	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGAATAATAAAAACTCTAG	280	False	NA	-8	True	AATGAA	-8	NA	68248006	68257127	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_68248706_68250187_68250471_68250793_68250968_68251049_68251179_68254403_68254568_68255699_68255877_68256813
H1_mix_00036444	chr17	+	1361	8	FSM	ENSG00000196704.14	ENST00000580753.5	1339	8	-22	0	9	0	multi-exon	FALSE	canonical	3	122	junction_1	228.140754977344	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCTAGAAACTCTTTATC	286	False	NA	4	True	AATAAA	-1	NA	68248012	68257139	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_68248059_68248643_68248706_68250187_68250471_68250793_68250968_68251049_68251179_68254403_68254568_68255699_68255877_68256813
H1_mix_00036445	chr17	+	2281	6	FSM	ENSG00000196704.14	ENST00000577985.5	2257	6	-24	0	-24	0	multi-exon	FALSE	canonical	3	727	junction_2	41.0141439018298	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTCTCATCTTACTGGC	1040	False	NA	20	True	AATAAA	-17	NA	68249175	68257155	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_68250471_68250793_68250968_68251049_68251179_68254403_68254568_68255699_68255877_68256813
H1_mix_00036448	chr17	+	4237	11	FSM	ENSG00000108946.16	ENST00000358598.6	3576	11	0	-661	0	0	multi-exon	TRUE	canonical	3	177	junction_1	473.126251649599	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAAATTTCTCTGGGTT	2	True	NA	8	True	AATAAA	-9	NA	68512031	68533423	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_68512143_68515393_68515577_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68530276
H1_mix_00036449	chr17	+	4268	11	FSM	ENSG00000108946.16	ENST00000589228.6	4253	11	-15	0	0	0	multi-exon	FALSE	canonical	3	1341	junction_1	181.078684554533	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTGGGTTGACAGTCC	-38	True	NA	16	True	AATAAA	-17	NA	68512414	68533431	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_68512549_68515393_68515577_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68530276
H1_mix_00036450	chr17	+	4327	11	FSM	ENSG00000108946.16	ENST00000392711.5	4327	11	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	513.373781956188	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAAATTTCTCTGGGTT	309	False	NA	8	True	AATAAA	-9	NA	68512378	68533423	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_68512580_68515393_68515577_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68530276
H1_mix_00036451	chr17	+	556	2	FSM	ENSG00000108946.16	ENST00000592194.1	556	2	0	0	0	0	multi-exon	FALSE	canonical	3	1341	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACAATTCTTTGTAACTT	-38	True	NA	NA	False	AATAAA	-8	NA	68512414	68515815	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_68512549_68515393
H1_mix_00036452	chr17	+	3697	12	FSM	ENSG00000108946.16	ENST00000536854.6	3697	12	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	651.826537286373	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAAATGAATCAGTTTT	-3	True	NA	NA	False	AATAAA	-21	NA	68512449	68532762	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_68512549_68514986_68515120_68515393_68515577_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68530276
H1_mix_00036453	chr17	+	1344	11	NIC	ENSG00000108946.16	novel	1209	10	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	130	junction_10	487.872565328283	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACTTCCTAGTAGCCTTT	-33	True	NA	24	True	AATAAA	-25	NA	68512419	68551319	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_68512549_68515393_68515577_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68551083
H1_mix_00036455	chr17	+	1209	10	FSM	ENSG00000108946.16	ENST00000588188.6	1209	10	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_9	510.724346418586	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACTTCCTAGTAGCCTTT	-10	True	NA	24	True	AATAAA	-25	NA	68515399	68551319	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_68515577_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68551083
H1_mix_00036468	chr17	+	3640	6	FSM	ENSG00000141219.16	ENST00000359042.6	3645	6	5	0	5	0	multi-exon	FALSE	canonical	3	137	junction_3	40.3910881259715	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATAAAAAGTACTCCC	16	False	NA	101	True	AATAAA	-10	NA	73232626	73248947	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_73232718_73233219_73233326_73235475_73236996_73242243_73242352_73242895_73243004_73247240
H1_mix_00036469	chr17	+	3459	5	FSM	ENSG00000141219.16	ENST00000268942.12	3449	5	-10	0	5	0	multi-exon	FALSE	canonical	3	43	junction_3	73.9746578227977	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCAGACTCTTTTATACT	16	False	NA	28	True	AATAAA	-13	NA	73232626	73248874	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_73232718_73233219_73233326_73235475_73236996_73242895_73243004_73247240
H1_mix_00036473	chr17	+	468	5	FSM	ENSG00000172809.13	ENST00000439590.6	431	5	-21	-16	-21	0	multi-exon	FALSE	canonical	3	830	junction_1	5378.79602583143	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGGATGGGAAAGGGAAAAAT	NA	False	NA	31	True	ATTAAA	-33	NA	74203560	74209896	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_74203711_74203917_74203959_74204129_74204191_74209186_74209310_74209803
H1_mix_00036476	chr17	+	344	5	FSM	ENSG00000172809.13	ENST00000584577.5	344	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	5699.43179185434	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGTCTTTCGTCTTTGCG	9	True	NA	13	True	ATTAAA	-15	NA	74203692	74209878	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_74203746_74203917_74203959_74204129_74204191_74209186_74209310_74209812
H1_mix_00036477	chr17	+	543	4	FSM	ENSG00000172809.13	ENST00000533498.1	532	4	-11	0	0	0	multi-exon	FALSE	canonical	3	10545	junction_3	1626.41575933776	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGGATGGGAAAGGGAAAAAT	9	True	NA	31	True	ATTAAA	-33	NA	74203692	74209896	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_74203959_74204129_74204191_74209186_74209310_74209803
H1_mix_00036479	chr17	+	3235	4	FSM	ENSG00000170412.18	ENST00000652232.1	2371	4	-862	-2	-718	0	multi-exon	FALSE	canonical	3	50	junction_1	65.6167322834318	4208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGCTCTGGGATTGTGG	316	False	NA	27	True	AATAAA	-20	NA	74430665	74447429	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_74432142_74439744_74440828_74443817_74443913_74446848
H1_mix_00036481	chr17	+	3615	4	NIC	ENSG00000170412.18	novel	2371	4	NA	NA	-718	0	combination_of_known_junctions	FALSE	canonical	3	106	junction_1	39.7520090337862	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTTGCTCTGGGATTGT	316	False	NA	25	True	AATAAA	-18	NA	74430665	74447427	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_74432524_74439744_74440828_74443817_74443913_74446848
H1_mix_00036482	chr17	+	2613	9	FSM	ENSG00000172794.20	ENST00000392613.10	2613	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	4.26468052730799	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTGTCCACTGTTTCTT	4	True	NA	21	True	ATTAAA	-21	NA	74737255	74747335	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_74737366_74740767_74740879_74742253_74742296_74743128_74743196_74743287_74743341_74744307_74744374_74744872_74744930_74745007_74745085_74745305
H1_mix_00036483	chr17	+	2008	6	FSM	ENSG00000109062.12	ENST00000262613.10	1993	6	-15	0	-15	0	multi-exon	FALSE	canonical	3	864	junction_1	30.8259630830896	358	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCAGCCTCCGTGTGTT	NA	False	NA	37	True	NA	NA	NA	74748612	74769353	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_74749288_74762011_74762174_74763366_74763521_74766935_74766977_74768146_74768237_74768467
H1_mix_00036485	chr17	+	1751	10	FSM	ENSG00000109066.14	ENST00000582773.5	1740	10	-11	0	-10	0	multi-exon	FALSE	canonical	2	11	junction_9	41.7692071587032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGTTTCCCACATCACT	-21	True	NA	28	True	AATAAA	-13	NA	74776488	74839751	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_74776578_74777263_74777376_74785481_74785604_74788788_74788871_74790199_74790297_74790955_74791037_74795011_74795112_74795523_74795633_74819749_74819844_74838886
H1_mix_00036487	chr17	+	4695	10	NNC	ENSG00000109066.14	novel	4703	10	NA	NA	2	0	intron_retention	FALSE	canonical	3	12	junction_7	40.3460341190532	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGTTTCCCACATCACT	-8	True	NA	28	True	AATAAA	-13	NA	74776501	74839751	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_74776578_74777263_74777376_74785481_74785604_74788788_74788871_74790199_74790297_74790955_74791037_74795011_74795112_74795526_74795633_74819749_74819844_74835926
H1_mix_00036490	chr17	+	1073	6	FSM	ENSG00000167862.10	ENST00000584208.5	593	6	-146	-334	-146	12	multi-exon	FALSE	canonical	3	7	junction_4	100.511889843938	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATTCAGAATGCTTCAG	8080	False	NA	23	True	AATAAA	-25	NA	75012523	75021273	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75012873_75017077_75017115_75019699_75019760_75020312_75020396_75020466_75020658_75020920
H1_mix_00036491	chr17	+	894	6	FSM	ENSG00000167862.10	ENST00000301585.10	894	6	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_4	20.448960853794	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGCTTCCCTTCTCATTC	-5	True	NA	11	True	AATAAA	-13	NA	75012669	75021261	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75012873_75017077_75017115_75019699_75019760_75020312_75020396_75020487_75020658_75020920
H1_mix_00036493	chr17	+	3406	3	FSM	ENSG00000180901.11	ENST00000579230.1	950	3	75	-2531	75	0	multi-exon	FALSE	canonical	3	175	junction_2	13.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTGTGTTTTCCATTA	5312	False	NA	53	True	AATAAA	-27	NA	75059197	75065889	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75059606_75062119_75062246_75063017
H1_mix_00036500	chr17	+	1953	7	FSM	ENSG00000170190.16	ENST00000329783.9	1940	7	-13	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	19.3857049280019	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAGGAGGTTGGTTTGGAT	18	True	NA	NA	False	AATAAA	-22	NA	75087940	75106162	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75088045_75089150_75089305_75093588_75093836_75098037_75098182_75100006_75100817_75103969_75104181_75105879
H1_mix_00036502	chr17	+	3617	3	FSM	ENSG00000125449.7_ENSG00000279035.1	ENST00000581078.1	1002	3	0	-2615	0	-1258	multi-exon	FALSE	canonical	1	1	junction_2	25.5	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTCCGCCGGGCTGATTT	-9	True	NA	NA	False	NA	NA	NA	75109951	75131785	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75110380_75110462_75110543_75128676
H1_mix_00036503	chr17	+	2168	3	FSM	ENSG00000125449.7	ENST00000245543.6	2151	3	-17	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	1.5	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATTTCCATGCCAGCCA	-9	True	NA	78	True	ATTAAA	-21	NA	75109951	75130272	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75110380_75110462_75110607_75128676
H1_mix_00036505	chr17	+	1903	18	FSM	ENSG00000125450.11	ENST00000579298.5	1890	18	-13	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	116.951029292585	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTATCTTTGTATGGCA	1	True	NA	-31	True	NA	NA	NA	75205706	75235691	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75205795_75208526_75208621_75209822_75209986_75211991_75212063_75213075_75213120_75215753_75215824_75218184_75218307_75225341_75225465_75225697_75225830_75226050_75226158_75231339_75231424_75231572_75231639_75231827_75231980_75232850_75232969_75233057_75233159_75234636_75234789_75235099_75235202_75235577
H1_mix_00036506	chr17	+	2246	17	FSM	ENSG00000125450.11	ENST00000581104.5	2233	17	-13	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	118.266647876737	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTATATAGATTTTTTTA	1	True	NA	-12	True	NA	NA	NA	75205706	75235710	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75205795_75208526_75208621_75209822_75209986_75211991_75212063_75213075_75213120_75215753_75215824_75225102_75225238_75225341_75225465_75225697_75225830_75226050_75226158_75231339_75231424_75231572_75231639_75231827_75231980_75232850_75232969_75233057_75233159_75234636_75235202_75235577
H1_mix_00036507	chr17	+	2010	18	FSM	ENSG00000125450.11	ENST00000579324.5	2010	18	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	119.331007174818	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTCTTAGAGTCCACCCA	1	True	NA	35	True	AATAAA	-18	NA	75205706	75235757	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75205795_75209822_75209986_75211991_75212063_75213075_75213120_75215753_75215824_75218184_75218307_75225102_75225238_75225341_75225465_75225697_75225830_75226050_75226158_75231339_75231424_75231572_75231639_75231827_75231980_75232850_75232969_75233057_75233159_75234636_75234789_75235099_75235202_75235577
H1_mix_00036511	chr17	+	1926	9	FSM	ENSG00000125450.11	ENST00000540768.5	1926	9	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	155.824219876116	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTCTTAGAGTCCACCCA	7722	False	NA	35	True	AATAAA	-18	NA	75228160	75235757	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75229132_75231339_75231424_75231572_75231639_75231827_75231980_75232850_75232969_75233057_75233159_75234636_75234789_75235099_75235202_75235577
H1_mix_00036517	chr17	+	1638	4	FSM	ENSG00000125445.11	ENST00000579002.5	1638	4	0	0	0	0	multi-exon	FALSE	canonical	3	1291	junction_2	39.6063967897443	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTTGTCCTTATACAAAA	27	False	NA	17	True	NA	NA	NA	75261911	75266330	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75262689_75262803_75262868_75263339_75263508_75265701
H1_mix_00036519	chr17	+	5438	31	FSM	ENSG00000177728.17	ENST00000581085.5	5432	31	-6	0	0	0	multi-exon	FALSE	canonical	2	108	junction_9	32.9339574839641	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGCTGGTCTGTAAGG	-4	True	NA	NA	False	ATTAAA	-23	NA	75456634	75500090	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75456752_75471799_75471930_75485427_75485548_75485870_75485999_75486289_75486427_75487931_75488135_75488758_75488911_75489265_75489369_75489575_75489663_75490233_75490351_75490701_75490759_75491048_75491154_75491302_75491456_75491690_75491901_75492473_75492790_75492928_75493594_75493698_75493917_75494626_75494809_75494895_75495035_75495283_75495400_75495543_75495644_75495965_75496075_75496281_75496472_75496729_75496808_75497112_75497199_75497780_75497863_75498174_75498324_75498443_75498539_75498628_75498723_75498911_75499083_75499261
H1_mix_00036520	chr17	+	5412	32	FSM	ENSG00000177728.17	ENST00000314256.12	5412	32	0	0	0	0	multi-exon	FALSE	canonical	2	108	junction_9	32.5251203646451	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTCTCTCTGCTTAGA	-4	True	NA	9	True	AATAAA	-17	NA	75456634	75500452	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75456752_75471799_75471930_75485427_75485548_75485870_75485999_75486289_75486427_75487931_75488135_75488758_75488911_75489265_75489369_75489575_75489663_75490233_75490351_75490701_75490759_75491048_75491154_75491302_75491456_75491690_75491901_75492473_75492790_75492928_75493103_75493490_75493594_75493698_75493917_75494626_75494809_75494895_75495035_75495283_75495400_75495543_75495644_75495965_75496075_75496281_75496472_75496729_75496808_75497112_75497199_75497780_75497863_75498174_75498324_75498443_75498539_75498628_75498723_75498911_75499083_75499261
H1_mix_00036521	chr17	+	4970	32	NIC	ENSG00000177728.17	novel	5412	32	NA	NA	5	-2	combination_of_known_junctions	FALSE	canonical	2	64	junction_14	36.6137132211098	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGTGGCTGGTCTGTAA	26	False	NA	NA	False	ATTAAA	-21	NA	75456664	75500088	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_75456752_75471799_75471930_75485427_75485548_75485870_75485999_75486289_75486427_75487931_75488135_75488758_75488911_75489265_75489369_75489575_75489663_75490233_75490351_75490701_75490759_75491048_75491154_75491302_75491456_75491690_75491853_75492473_75492790_75492928_75493103_75493490_75493594_75493698_75493917_75494626_75494809_75494895_75495035_75495283_75495400_75495543_75495644_75495965_75496075_75496281_75496472_75496729_75496808_75497112_75497199_75497780_75497863_75498174_75498324_75498443_75498539_75498628_75498723_75498911_75499083_75499261
H1_mix_00036528	chr17	+	733	3	FSM	ENSG00000182173.14	ENST00000583454.1	733	3	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_1	41.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAGAGCTGGGAAGTTGC	-22	True	NA	NA	False	NA	NA	NA	75516525	75517475	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75516617_75516745_75517073_75517160
H1_mix_00036529	chr17	+	1952	11	FSM	ENSG00000182173.14	ENST00000333213.11	1937	11	-15	0	-13	0	multi-exon	FALSE	canonical	3	318	junction_8	49.8943884620305	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTTCTGTATGTACTG	NA	False	NA	13	True	ATTAAA	-16	NA	75516512	75524735	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75516617_75516745_75516911_75517008_75517073_75517160_75517245_75517556_75517656_75518994_75519048_75521408_75521511_75521704_75522334_75523274_75523336_75523662_75523780_75524261
H1_mix_00036530	chr17	+	2085	11	FSM	ENSG00000182173.14	ENST00000545228.3	2063	11	-22	0	0	0	multi-exon	FALSE	canonical	3	21	junction_8	126.655280189971	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGTGCTATAAAGCCAAAGC	-22	True	NA	-29	True	NA	NA	NA	75516525	75524693	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75516617_75516745_75516911_75517008_75517073_75517160_75517245_75517556_75517656_75518994_75519048_75521408_75521511_75521704_75522522_75523274_75523336_75523662_75523780_75524261
H1_mix_00036531	chr17	+	3040	9	FSM	ENSG00000182173.14	ENST00000580013.6	3036	9	-4	0	0	0	multi-exon	FALSE	canonical	3	367	junction_1	35.4815092689136	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTTCTTTTCTGCTGTTT	0	True	NA	1	True	ATTAAA	-4	NA	75516547	75524723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75516617_75516745_75516911_75517008_75517073_75517160_75517245_75517556_75517656_75518994_75519048_75521408_75523336_75523662_75523780_75524261
H1_mix_00036532	chr17	+	1936	9	FSM	ENSG00000182173.14	ENST00000679443.1	1936	9	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_6	48.0479903325831	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATAAAGCCAAAGCCATTA	267	False	NA	-24	True	NA	NA	NA	75516814	75524698	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75516911_75517008_75517073_75517160_75517245_75517556_75517656_75518994_75519048_75521408_75522334_75523274_75523336_75523662_75523780_75524261
H1_mix_00036537	chr17	+	1380	10	FSM	ENSG00000073350.14	ENST00000375227.8	1374	10	-6	0	0	0	multi-exon	FALSE	canonical	3	441	junction_7	42.5670132530337	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTGTGGCACGTACCTG	9	True	NA	9	True	AATAAA	-12	NA	75525725	75564721	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75525826_75543396_75543502_75556045_75556144_75558154_75558237_75558511_75558628_75559251_75559411_75563015_75563179_75563330_75563464_75563751_75563807_75564352
H1_mix_00036538	chr17	+	3480	25	FSM	ENSG00000073350.14	ENST00000167462.9	3480	25	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_23	94.2878184514486	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGTCCACTACTTTAATA	9	True	NA	15	True	AATAAA	-17	NA	75525725	75575208	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75525826_75543396_75543502_75556045_75556144_75558154_75558237_75558511_75558628_75559251_75559411_75563015_75563179_75563330_75563464_75563751_75563807_75564352_75564508_75568475_75568694_75568771_75568840_75568977_75569132_75569220_75569326_75569962_75570256_75570347_75570499_75570949_75571101_75571666_75571784_75571897_75572065_75573013_75573279_75573480_75573632_75573951_75573981_75574212_75574261_75574609_75574669_75574870
H1_mix_00036539	chr17	+	3516	26	NIC	ENSG00000073350.14	novel	3553	26	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	223	junction_25	85.0745555380691	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGTCCACTACTTTAAT	12	True	NA	14	True	AATAAA	-16	NA	75525728	75575207	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_75525826_75543396_75543502_75556045_75556144_75558154_75558237_75558511_75558628_75559251_75559411_75563015_75563179_75563330_75563464_75563751_75563807_75564352_75564508_75568475_75568694_75568771_75568840_75568977_75569132_75569220_75569326_75569962_75570256_75570347_75570499_75570949_75571101_75571666_75571784_75571897_75572065_75573013_75573279_75573480_75573632_75573951_75573981_75574212_75574261_75574452_75574496_75574609_75574669_75574873
H1_mix_00036540	chr17	+	3498	25	NIC	ENSG00000073350.14	novel	3553	26	NA	NA	9	0	combination_of_known_junctions	TRUE	canonical	3	153	junction_23	100.701980560905	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTCCACTACTTTAATAT	-11	True	NA	16	True	AATAAA	-18	NA	75525705	75575209	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_75525826_75543396_75543502_75556045_75556144_75558154_75558237_75558511_75558628_75559251_75559411_75563015_75563179_75563330_75563464_75563751_75563807_75564352_75564508_75568475_75568694_75568771_75568840_75568977_75569132_75569220_75569326_75569962_75570256_75570347_75570499_75570949_75571101_75571666_75571784_75571897_75572065_75573013_75573279_75573480_75573632_75573951_75573981_75574212_75574261_75574609_75574669_75574873
H1_mix_00036542	chr17	+	2971	15	FSM	ENSG00000073350.14	ENST00000577500.5	2971	15	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_12	135.607947061087	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGTCCACTACTTTAAT	9631	False	NA	14	True	AATAAA	-16	NA	75567919	75575207	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75568694_75568771_75568840_75568977_75569132_75569220_75569326_75569962_75570256_75570347_75570499_75570949_75571101_75571666_75571784_75571897_75572065_75573013_75573279_75573480_75573632_75573951_75573981_75574110_75574261_75574609_75574669_75574870
H1_mix_00036543	chr17	+	2392	16	ISM	ENSG00000073350.14	ENST00000578638.5	2367	18	4568	82	422	-9	3prime_fragment	FALSE	canonical	3	223	junction_15	72.1373381513038	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCCCATCCCTTTTTGTA	NA	False	NA	-81	True	NA	NA	NA	75568341	75575112	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_75568694_75568771_75568840_75568977_75569132_75569220_75569326_75569962_75570256_75570347_75570499_75570949_75571101_75571666_75571784_75571897_75572065_75573013_75573279_75573480_75573632_75573951_75573981_75574212_75574261_75574452_75574496_75574609_75574669_75574873
H1_mix_00036550	chr17	+	236	3	FSM	ENSG00000266714.10	ENST00000610429.1	469	3	0	233	0	56	multi-exon	FALSE	canonical	3	28	junction_2	0.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGGGGAGCTGGGCAGG	35	False	NA	NA	False	NA	NA	NA	75615862	75616446	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75615885_75616068_75616148_75616311
H1_mix_00036556	chr17	+	2582	11	FSM	ENSG00000161526.15	ENST00000584667.6	2500	11	-10	-72	-10	69	multi-exon	FALSE	canonical	3	718	junction_5	41.8168626274138	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGTCTCGTGCTCTGTCGG	-22	True	NA	93	True	NA	NA	NA	75667327	75708131	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75667479_75668515_75668626_75671815_75671864_75693439_75693483_75699782_75699872_75702479_75702572_75703310_75703372_75703807_75703860_75704755_75704815_75706007_75706093_75706339
H1_mix_00036558	chr17	+	2786	8	FSM	ENSG00000161526.15	ENST00000580601.5	2786	8	0	0	0	0	multi-exon	FALSE	canonical	3	718	junction_2	32.5432208684051	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCACTGGCCTCTCCTGCAT	4886	False	NA	40	True	ATTAAA	-33	NA	75691569	75706774	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75693483_75699782_75699872_75702479_75702572_75703310_75703372_75703807_75703860_75704755_75704815_75706007_75706093_75706339
H1_mix_00036564	chr17	+	1325	4	FSM	ENSG00000132478.10	ENST00000586527.1	1312	4	-13	0	0	0	multi-exon	FALSE	canonical	3	100	junction_2	7.76029781788188	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTGTTTTTATTTCAG	1	True	NA	27	True	ATTAAA	-27	NA	75784841	75794198	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75784985_75791759_75792020_75792312_75792479_75793442
H1_mix_00036578	chr17	+	416	3	FSM	ENSG00000129673.10	ENST00000585649.1	478	3	62	0	62	0	multi-exon	FALSE	canonical	1	2	junction_1	1	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGGCCACATAGCCCACC	1030	False	NA	NA	False	NA	NA	NA	76468671	76469687	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_76468910_76469172_76469328_76469664
H1_mix_00036580	chr17	+	1336	5	NNC	ENSG00000163597.16	novel	1947	5	NA	NA	-14	547	at_least_one_novel_splicesite	TRUE	non_canonical	3	651	junction_4	531.990601420739	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTGTTGTTGTTTTTG	495	False	NA	NA	False	NA	NA	NA	76557718	76564130	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_76557858_76558944_76559044_76561287_76561399_76563118_76563754_76563778
H1_mix_00036584	chr17	+	2561	4	FSM	ENSG00000163597.16	ENST00000670737.2	2542	4	-47	28	-23	-17	multi-exon	FALSE	canonical	3	741	junction_1	560.221384811398	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAATAAACTTGGGAAACT	486	False	NA	-6	True	NA	NA	NA	76557709	76565321	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_76557858_76558944_76559044_76561287_76561399_76563118
H1_mix_00036585	chr17	+	2383	4	NNC	ENSG00000163597.16	novel	2542	4	NA	NA	-2	-17	at_least_one_novel_splicesite	FALSE	non_canonical	3	651	junction_3	529.701802904238	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAATAAACTTGGGAAACT	-7	True	NA	-6	True	NA	NA	NA	76557763	76565321	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_76557858_76561287_76561399_76563118_76563754_76563778
H1_mix_00036587	chr17	+	2435	3	FSM	ENSG00000163597.16	ENST00000661348.2	2475	3	31	9	-2	0	multi-exon	FALSE	canonical	3	1245	junction_1	351	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAGTTCAAATTTACTGA	-7	True	NA	21	True	AATAAA	-19	NA	76557763	76565348	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_76557858_76561287_76561399_76563118
H1_mix_00036591	chr17	+	1174	5	FSM	ENSG00000181038.14	ENST00000615984.4	1171	5	-3	0	-3	0	multi-exon	FALSE	canonical	1	20	junction_1	65.807959245064	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGATTGTTCCTTAGTC	749	False	NA	NA	False	ATTAAA	-16	NA	76726826	76733879	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_76727214_76729689_76729795_76732977_76733216_76733292_76733378_76733520
H1_mix_00036593	chr17	+	1065	4	FSM	ENSG00000181038.14	ENST00000588822.1	1049	4	-16	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	80.7313790019442	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTCAGCTTGAGAATGCA	1	True	NA	NA	False	NA	NA	NA	76726853	76733758	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_76727358_76732977_76733216_76733292_76733378_76733520
H1_mix_00036594	chr17	+	1044	4	FSM	ENSG00000181038.14	ENST00000590964.5	1006	4	-38	0	-14	0	multi-exon	FALSE	canonical	1	47	junction_1	67.5886249469703	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGGATTGTTCCTTAGT	738	False	NA	NA	False	ATTAAA	-15	NA	76726815	76733878	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_76727179_76732977_76733216_76733292_76733378_76733520
H1_mix_00036595	chr17	+	709	4	NIC	ENSG00000181038.14	novel	1006	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	18	junction_1	76.1095701384962	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGATTGTTCCTTAGTCA	1	True	NA	NA	False	ATTAAA	-17	NA	76726853	76733880	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_76726880_76732977_76733216_76733292_76733378_76733520
H1_mix_00036596	chr17	+	1167	3	ISM	ENSG00000181038.14	ENST00000586752.5	904	4	18	-138	-1	-2	intron_retention	FALSE	canonical	3	38	junction_1	79	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTTGGATTGTTCCTTA	16	True	NA	NA	False	ATTAAA	-13	NA	76726868	76733876	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_76727214_76732977_76733216_76733292
H1_mix_00036601	chr17	+	2938	14	FSM	ENSG00000092931.12	ENST00000336509.8	2538	14	-345	-55	-31	0	multi-exon	TRUE	canonical	3	12	junction_1	22.5645687597527	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGATTTTGAAAAGATGT	544	False	NA	NA	False	AATAAA	-22	NA	76737355	76779341	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_76737884_76738281_76738449_76738937_76738994_76740956_76741065_76741968_76742049_76742176_76742274_76743397_76743457_76744321_76744467_76754046_76754088_76767385_76767452_76769745_76769872_76774996_76775172_76776405_76776542_76778187
H1_mix_00036602	chr17	+	2943	14	FSM	ENSG00000092931.12	ENST00000588460.6	2277	14	-46	-620	-46	0	multi-exon	FALSE	canonical	3	35	junction_1	16.8378975201599	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGATTTTGAAAAGATGT	96	False	NA	NA	False	AATAAA	-22	NA	76737632	76779341	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_76738166_76738281_76738449_76738937_76738994_76740956_76741065_76741968_76742049_76742176_76742274_76743397_76743457_76744321_76744467_76754046_76754088_76767385_76767452_76769745_76769872_76774996_76775172_76776405_76776542_76778187
H1_mix_00036604	chr17	+	2224	11	NNC	ENSG00000167889.13	novel	4486	17	NA	NA	3	7994	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	8.75271386485357	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGTGACTAAATCTTCCA	6	True	NA	NA	False	AATAAA	-17	NA	76868458	76933014	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_76869098_76872850_76872964_76882150_76882299_76902554_76902671_76903302_76903377_76904251_76904423_76905168_76905334_76906017_76906188_76924973_76925098_76926596_76926731_76932644
H1_mix_00036607	chr17	+	603	4	FSM	ENSG00000234912.12	ENST00000561633.5	603	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	15.8394724940223	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTATTGAATTAAAATAA	31	True	NA	-31	True	AAAACA	-9	NA	77088748	77099196	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_77088950_77089152_77089272_77093243_77093348_77099017
H1_mix_00036611	chr17	+	5500	17	FSM	ENSG00000129657.16	ENST00000436233.9	5500	17	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_6	23.5981990838284	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTCTTTTTCTTATTGT	-29	True	NA	NA	False	AATAAA	-21	NA	77140968	77217101	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_77141108_77142645_77142751_77143566_77143660_77190802_77190953_77191180_77191313_77193420_77193550_77194676_77194912_77196201_77196312_77200483_77200674_77203569_77203659_77205275_77205347_77206228_77206401_77206727_77206863_77209341_77209477_77211949_77212202_77213313_77213493_77213917
H1_mix_00036612	chr17	+	4998	19	NNC	ENSG00000129657.16	novel	2908	18	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	28	junction_18	50.1798309293561	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTCTTTTTCTTATTGT	34	True	NA	NA	False	AATAAA	-21	NA	77141031	77217101	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_77141108_77142645_77142751_77143566_77143660_77190802_77190953_77191180_77191313_77193420_77193550_77194676_77194912_77196201_77196312_77200483_77200674_77203569_77203659_77205275_77205347_77206228_77206401_77206727_77206863_77209341_77209477_77211949_77212202_77213313_77213493_77213917_77215806_77215844_77215858_77216257
H1_mix_00036613	chr17	+	5138	18	NNC	ENSG00000129657.16	novel	2908	18	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_17	47.4216162586358	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTCTTTTTCTTATTGT	34	True	NA	NA	False	AATAAA	-21	NA	77141031	77217101	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_77141108_77142645_77142751_77143566_77143660_77190802_77190953_77191180_77191313_77193420_77193550_77194676_77194912_77196201_77196312_77200483_77200674_77203569_77203659_77205275_77205347_77206228_77206401_77206727_77206863_77209341_77209477_77211949_77212202_77213313_77213493_77213917_77215959_77216257
H1_mix_00036614	chr17	+	2908	18	FSM	ENSG00000129657.16	ENST00000443798.8	2908	18	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_17	45.3752520082224	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTCTTTTTCTTATTGT	34	True	NA	NA	False	AATAAA	-21	NA	77141031	77217101	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_77141108_77142645_77142751_77143566_77143660_77190802_77190953_77191180_77191313_77193420_77193550_77194676_77194912_77196201_77196312_77200483_77200674_77203569_77203659_77205275_77205347_77206228_77206401_77206727_77206863_77209341_77209477_77211949_77212202_77213313_77213493_77213917_77214020_77216548
H1_mix_00036618	chr17	+	3984	11	FSM	ENSG00000184640.20	ENST00000423034.6	3984	11	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_1	155.357941541461	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCTCCTGAGTGAGAATG	99	False	NA	34	True	AATAAA	-23	NA	77373189	77500594	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_77373553_77402058_77402704_77482143_77482336_77487423_77487553_77488239_77488322_77488726_77488865_77490741_77490860_77492620_77492717_77492979_77493077_77497314_77497367_77498522
H1_mix_00036620	chr17	+	3026	10	FSM	ENSG00000184640.20	ENST00000541152.6	3026	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	195.80943116544	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCTCCTGAGTGAGAATG	16	False	NA	34	True	AATAAA	-23	NA	77450736	77500594	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_77450787_77482143_77482336_77487423_77487553_77488239_77488322_77488726_77488865_77490741_77490860_77492620_77492717_77492979_77493077_77497314_77497367_77498522
H1_mix_00036621	chr17	+	1691	10	FSM	ENSG00000184640.20	ENST00000591088.5	1691	10	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_1	145.644247787478	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTCGCACTTGCAGAGGA	494	False	NA	NA	False	NA	NA	NA	77451243	77499024	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_77451529_77482143_77482336_77487423_77487553_77488239_77488322_77488726_77488865_77490741_77490860_77492620_77492717_77492979_77493077_77497314_77497367_77498522
H1_mix_00036622	chr17	+	3133	10	NIC	ENSG00000184640.20	novel	817	6	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	184.679903256057	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCTCCTGAGTGAGAATG	4135	False	NA	34	True	AATAAA	-23	NA	77466403	77500594	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_77466561_77482143_77482336_77487423_77487553_77488239_77488322_77488726_77488865_77490741_77490860_77492620_77492717_77492979_77493077_77497314_77497367_77498522
H1_mix_00036624	chr17	+	1154	3	NIC	ENSG00000078687.17	novel	7093	23	NA	NA	-524	-36846	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	30	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAAAGTTCCCTGTTC	14	False	NA	-8	True	AATAAA	-7	NA	77958715	78012503	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_77959269_78004169_78004270_78012002
H1_mix_00036625	chr17	+	9740	21	FSM	ENSG00000078687.17	ENST00000335749.4	9740	21	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	10.4655386865655	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGTGGTTTGTGTTTTT	884	False	NA	NA	False	ATTAAA	-31	NA	78005055	78108835	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_78005080_78031515_78031843_78048844_78051449_78064721_78064938_78067756_78067924_78071084_78071166_78073036_78073095_78075135_78075279_78077184_78077335_78079394_78079542_78083046_78083167_78086502_78086587_78086852_78087094_78091439_78091608_78092932_78093125_78093619_78093764_78097744_78097862_78098342_78098538_78102473_78102545_78103413_78103554_78104484
H1_mix_00036629	chr17	+	1495	4	FSM	ENSG00000108639.8	ENST00000225777.8	1495	4	0	0	0	0	multi-exon	FALSE	canonical	3	982	junction_3	82.4311160235556	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCAGTCATTGGTTGAG	-4	True	NA	29	True	AATAAA	-15	NA	78168580	78172720	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_78168716_78170816_78171055_78171509_78171650_78171738
H1_mix_00036630	chr17	+	3036	1	FSM	ENSG00000108639.8	ENST00000592456.1	3036	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTCCAGTCATTGGTTGA	508	False	NA	28	True	AATAAA	-14	NA	78169683	78172719	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_78169700_78172700
H1_mix_00036636	chr17	+	1218	6	NIC	ENSG00000183077.16	novel	1686	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_4	17.1510932596147	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCTCGTTCATTTACGT	-3	True	NA	25	True	AATAAA	-18	NA	78187357	78207702	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_78187434_78190969_78191061_78202498_78202604_78202702_78202752_78205945_78206051_78206910
H1_mix_00036637	chr17	+	550	3	FSM	ENSG00000183077.16	ENST00000586731.1	550	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	52	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTGGTATTTTGTTA	40	False	NA	4	True	AATAAA	-17	NA	78187400	78197560	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_78187434_78190969_78191061_78197134
H1_mix_00036639	chr17	+	2594	4	FSM	ENSG00000089685.15	ENST00000350051.8	2574	4	-20	0	-20	0	multi-exon	FALSE	canonical	3	1139	junction_3	267.253936671972	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTTCTTTTTCTTT	NA	False	NA	26	True	AATAAA	-21	NA	78214232	78225635	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_78214428_78214679_78214790_78216663_78216782_78223464
H1_mix_00036641	chr17	+	2700	5	FSM	ENSG00000089685.15	ENST00000301633.8	2711	5	10	1	10	0	multi-exon	FALSE	canonical	3	87	junction_3	711.514054674959	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTTCTTTTTCTTT	NA	False	NA	26	True	AATAAA	-21	NA	78214195	78225635	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_78214428_78214679_78214790_78215965_78216035_78216663_78216782_78223464
H1_mix_00036646	chr17	+	2148	10	NIC	ENSG00000087157.19	novel	2297	10	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	110	junction_9	119.41803325573	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATATTGCCTTTAACCA	16	True	NA	4	True	AATATA	-18	NA	78378669	78424554	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_78378809_78392475_78392666_78396307_78396386_78398251_78398352_78399347_78399538_78400676_78400856_78403567_78404090_78414951_78415028_78419545_78419726_78424060
H1_mix_00036647	chr17	+	1717	6	FSM	ENSG00000087157.19	ENST00000588281.5	1776	6	59	0	59	0	multi-exon	FALSE	canonical	3	110	junction_5	126.624800098559	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTGCCTTTAACCAGAC	NA	False	NA	7	True	AATATA	-21	NA	78399347	78424557	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_78399538_78400676_78400856_78403567_78404090_78414878_78415028_78419545_78419726_78424060
H1_mix_00036650	chr17	+	5413	3	ISM	ENSG00000087157.19	ENST00000588281.5	1776	6	4546	3	0	0	intron_retention	FALSE	canonical	3	365	junction_1	52.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATATTGCCTTTAACCA	NA	False	NA	4	True	AATATA	-18	NA	78403834	78424554	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_78404090_78414878_78415028_78419545
H1_mix_00036651	chr17	+	2971	4	FSM	ENSG00000173918.15	ENST00000579760.6	2886	4	-86	1	-86	0	multi-exon	FALSE	canonical	3	13	junction_1	4.10960933531265	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGCCTCGTCAGTTTGC	12	False	NA	5	True	ATTAAA	-21	NA	79024082	79049787	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_79024495_79043954_79044124_79046554_79046695_79047537
H1_mix_00036653	chr17	+	5260	12	NIC	ENSG00000167280.17	novel	4603	14	NA	NA	127	0	intron_retention	FALSE	canonical	3	46	junction_1	5.15383192111213	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGCAGTCGAGTCCTGGT	27	False	NA	18	True	AATAAA	-18	NA	79074950	79088599	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_79075091_79077429_79077498_79077662_79077865_79079488_79079638_79080206_79080365_79080924_79081074_79081897_79082064_79083019_79083124_79083481_79083591_79083760_79084687_79085233_79085343_79085619
H1_mix_00036654	chr17	+	5098	11	NIC	ENSG00000167280.17	novel	4603	14	NA	NA	140	0	intron_retention	FALSE	canonical	2	5	junction_3	16.0900590427754	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGCAGTCGAGTCCTGGT	40	False	NA	18	True	AATAAA	-18	NA	79074963	79088599	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_79075091_79077429_79077498_79077662_79077865_79080206_79080365_79080924_79081074_79081897_79082064_79083019_79083124_79083481_79083591_79083760_79084687_79085233_79085343_79085619
H1_mix_00036655	chr17	+	4626	10	FSM	ENSG00000167280.17	ENST00000300682.14	4626	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	12.7985338666506	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGCAGTCGAGTCCTGGT	5339	False	NA	18	True	AATAAA	-18	NA	79080311	79088599	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_79080365_79080924_79081074_79081897_79082878_79083019_79083124_79083481_79083591_79083760_79083952_79084537_79084687_79085233_79085343_79085619_79085735_79085932
H1_mix_00036657	chr17	+	582	3	FSM	ENSG00000173894.11	ENST00000571484.1	567	3	-15	0	0	0	multi-exon	FALSE	canonical	3	805	junction_2	12	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCCTTTTCTGCTGAG	-27	True	NA	20	True	GATAAA	-15	NA	79778147	79779739	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_79778308_79778383_79778428_79779361
H1_mix_00036663	chr17	+	975	4	FSM	ENSG00000171298.13	ENST00000570803.5	956	4	-19	0	-19	0	multi-exon	FALSE	canonical	3	60	junction_1	78.2091213776671	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGTACAGCGGCGGGCGG	-6	True	NA	NA	False	NA	NA	NA	80101536	80107718	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_80101626_80104554_80105133_80105748_80105895_80107556
H1_mix_00036664	chr17	+	3808	20	FSM	ENSG00000171298.13	ENST00000302262.8	3751	20	-61	4	-36	0	multi-exon	FALSE	canonical	3	174	junction_1	26.4104612866561	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCTTCTGCGGGTCTCTC	4600	False	NA	9	True	AATAAA	-15	NA	80101519	80119877	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_80101891_80104554_80105133_80105748_80105895_80107556_80107723_80107799_80107897_80108289_80108410_80108488_80108608_80108696_80108829_80109944_80110056_80110726_80110841_80110940_80111026_80111982_80112101_80112577_80112712_80112875_80113028_80113217_80113367_80116967_80117110_80117599_80117750_80118192_80118358_80118652_80118806_80119271
H1_mix_00036666	chr17	+	3562	21	FSM	ENSG00000171298.13	ENST00000390015.7	3549	21	-13	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	34.5193786154965	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCTTCTGCGGGTCTCTC	-3	True	NA	9	True	AATAAA	-15	NA	80101580	80119877	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_80101626_80101810_80101891_80104554_80105133_80105748_80105895_80107556_80107723_80107799_80107897_80108289_80108410_80108488_80108608_80108696_80108829_80109944_80110056_80110726_80110841_80110940_80111026_80111982_80112101_80112577_80112712_80112875_80113028_80113217_80113367_80116967_80117110_80117599_80117750_80118192_80118358_80118652_80118806_80119271
H1_mix_00036667	chr17	+	3482	20	NIC	ENSG00000171298.13	novel	3549	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_1	44.4502897048787	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCTTCTGCGGGTCTCTC	-3	True	NA	9	True	AATAAA	-15	NA	80101580	80119877	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_80101626_80104554_80105133_80105748_80105895_80107556_80107723_80107799_80107897_80108289_80108410_80108488_80108608_80108696_80108829_80109944_80110056_80110726_80110841_80110940_80111026_80111982_80112101_80112577_80112712_80112875_80113028_80113217_80113367_80116967_80117110_80117599_80117750_80118192_80118358_80118652_80118806_80119271
H1_mix_00036679	chr17	+	6205	21	FSM	ENSG00000173821.20	ENST00000411702.7	6428	21	223	0	223	0	multi-exon	FALSE	canonical	3	88	junction_6	25.833311827948	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTTATTTTACTTGTC	3729	False	NA	-46	True	AATATA	-31	NA	80371873	80395253	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_80371986_80372520_80372735_80372974_80373166_80374457_80374590_80375759_80375871_80376300_80376544_80376881_80376964_80377761_80377797_80379619_80379715_80380830_80380988_80381546_80383071_80383676_80383929_80385038_80385172_80385537_80385622_80386249_80386431_80386689_80386892_80388611_80388690_80389172_80389368_80389827_80389918_80390011_80390197_80393344
H1_mix_00036682	chr17	+	1157	10	NIC	ENSG00000173818.17	novel	2820	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	28.1179174895762	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTCTCAGGATTCATT	0	True	NA	25	True	AATAGA	-22	NA	80415176	80430341	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_80415251_80415649_80415822_80421827_80421963_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772_80429832_80430040
H1_mix_00036683	chr17	+	1475	7	FSM	ENSG00000173818.17	ENST00000522751.5	1475	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	14.8398861930347	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCTTGCTCTTTTTTAT	138	False	NA	8	True	AATAGA	-5	NA	80415314	80430324	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_80415822_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772
H1_mix_00036684	chr17	+	1104	10	NNC	ENSG00000173818.17	novel	908	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	34.8747317348857	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCTTGCTCTTTTTTAT	19	True	NA	8	True	AATAGA	-5	NA	80415486	80430324	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_80415519_80415649_80415822_80421827_80421963_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772_80429832_80430034
H1_mix_00036688	chr17	+	3193	14	FSM	ENSG00000175866.16	ENST00000321280.11	1939	14	21	-1275	-5	1	multi-exon	TRUE	canonical	3	18	junction_13	12.8450022514687	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGTTGGGTATGGACCTCC	-7	True	NA	24	True	AATAAA	-17	NA	81035142	81110513	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81035309_81053667_81053744_81057880_81057968_81084831_81084894_81085653_81085726_81086442_81086581_81099927_81100081_81103501_81103724_81103906_81104109_81104513_81104716_81106077_81106147_81106744_81106908_81108474_81108510_81108967
H1_mix_00036689	chr17	+	2148	15	FSM	ENSG00000175866.16	ENST00000435091.7	2129	15	-19	0	-5	0	multi-exon	FALSE	canonical	3	20	junction_14	14.5428641594145	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGTGTGATCTGTCCGC	-7	True	NA	20	True	AATAAA	-15	NA	81035142	81116224	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81035309_81053667_81053744_81057880_81057968_81084831_81084894_81085653_81085726_81086442_81086581_81099927_81100081_81103501_81103724_81103906_81104109_81104513_81104716_81106077_81106147_81106744_81106908_81108474_81108510_81110913_81110960_81115769
H1_mix_00036690	chr17	+	3312	14	FSM	ENSG00000175866.16	ENST00000428708.7	3304	14	-8	0	-5	0	multi-exon	FALSE	canonical	3	11	junction_13	14.4733993913257	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAAAATCACCCAACTTCC	-7	True	NA	NA	False	AATAAA	-26	NA	81035142	81117434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81035309_81053667_81053744_81057880_81057968_81084831_81084894_81085653_81085726_81086442_81086581_81099927_81100081_81103501_81103724_81103906_81104109_81104513_81104716_81106077_81106147_81106744_81106908_81108474_81108510_81115769
H1_mix_00036699	chr17	+	2049	6	NIC	ENSG00000185298.13	novel	2095	6	NA	NA	6	0	intron_retention	FALSE	canonical	3	18	junction_2	130.417790197503	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTTAAATTGGAGAATATA	37	False	NA	20	True	ATTAAA	-20	NA	81666777	81673899	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_81666901_81667728_81667863_81670229_81670454_81671743_81671827_81672075_81672156_81672494
H1_mix_00036702	chr17	+	3013	22	FSM	ENSG00000185359.14	ENST00000678196.1	3013	22	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_21	166.318152620682	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGCCCTCTGGCCGCA	NA	False	NA	NA	False	NA	NA	NA	81683962	81701929	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81684104_81685604_81685690_81686311_81686388_81687002_81687096_81688703_81688828_81690181_81690235_81690673_81690743_81691446_81691572_81693502_81693582_81693653_81693753_81693869_81693966_81694814_81694854_81694923_81695068_81695163_81695224_81695785_81696000_81696356_81696530_81696606_81696748_81696823_81696999_81700466_81700601_81700694_81700815_81701044_81701132_81701243
H1_mix_00036704	chr17	+	3293	21	FSM	ENSG00000185359.14	ENST00000678115.1	3293	21	0	0	0	0	multi-exon	FALSE	canonical	2	512	junction_16	78.4750119464789	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATCAGCGTTTTTTCTT	NA	False	NA	6	True	AATAAA	-13	NA	81683962	81702116	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81684104_81685604_81685690_81686311_81686388_81687002_81687096_81688703_81688828_81690181_81690235_81690673_81690743_81691446_81691572_81693502_81693582_81693653_81693753_81693869_81693966_81694814_81694854_81694923_81695068_81695163_81695224_81695785_81696530_81696606_81696748_81696823_81696999_81700466_81700601_81700694_81700815_81701044_81701132_81701507
H1_mix_00036707	chr17	+	2846	21	FSM	ENSG00000185359.14	ENST00000676478.1	2840	21	-6	0	0	0	multi-exon	FALSE	canonical	2	23	junction_5	164.975331489287	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATCAGCGTTTTTTCTT	-18	True	NA	6	True	AATAAA	-13	NA	81683999	81702116	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81684104_81685604_81685690_81686311_81686388_81687002_81687096_81688703_81688828_81690673_81690743_81691446_81691572_81693502_81693582_81693653_81693753_81693869_81693966_81694814_81694854_81694923_81695068_81695163_81695224_81695785_81696000_81696356_81696530_81696606_81696748_81696823_81696999_81700466_81700601_81700694_81700815_81701044_81701132_81701507
H1_mix_00036708	chr17	+	2904	22	FSM	ENSG00000185359.14	ENST00000329138.9	2893	22	-11	0	0	0	multi-exon	FALSE	canonical	2	512	junction_17	77.2118151521707	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCGTTTTTTCTTTAATT	-18	True	NA	11	True	AATAAA	-18	NA	81683999	81702121	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81684104_81685604_81685690_81686311_81686388_81687002_81687096_81688703_81688828_81690181_81690235_81690673_81690743_81691446_81691572_81693502_81693582_81693653_81693753_81693869_81693966_81694814_81694854_81694923_81695068_81695163_81695224_81695785_81696000_81696356_81696530_81696606_81696748_81696823_81696999_81700466_81700601_81700694_81700815_81701044_81701132_81701507
H1_mix_00036709	chr17	+	3109	23	FSM	ENSG00000185359.14	ENST00000676729.1	3109	23	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_2	203.636571631387	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATCAGCGTTTTTTCTT	29	True	NA	6	True	AATAAA	-13	NA	81684046	81702116	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81684104_81684812_81685070_81685604_81685690_81686311_81686388_81687002_81687096_81688703_81688828_81690181_81690235_81690673_81690743_81691446_81691572_81693502_81693582_81693653_81693753_81693869_81693966_81694814_81694854_81694923_81695068_81695163_81695224_81695785_81696000_81696356_81696530_81696606_81696748_81696823_81696999_81700466_81700601_81700694_81700815_81701044_81701132_81701507
H1_mix_00036710	chr17	+	4088	20	FSM	ENSG00000185359.14	ENST00000678658.1	4088	20	0	0	0	0	multi-exon	FALSE	canonical	2	512	junction_15	68.9087075216128	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTCTGCCTGTTCTGAT	1715	False	NA	NA	False	NA	NA	NA	81685732	81702915	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81686388_81687002_81687096_81688703_81688828_81690181_81690235_81690673_81690743_81691446_81691572_81693502_81693582_81693653_81693753_81693869_81693966_81694814_81694854_81694923_81695068_81695163_81695224_81695785_81696000_81696356_81696530_81696606_81696748_81696823_81696999_81700466_81700601_81700694_81700815_81701044_81701132_81701507
H1_mix_00036713	chr17	+	2032	10	FSM	ENSG00000185359.14	ENST00000677159.1	2032	10	0	0	0	0	multi-exon	FALSE	canonical	3	613	junction_5	49.7951358624068	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGAAAGCATCAGCGTTT	968	False	NA	0	True	AATAAA	-7	NA	81694748	81702110	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81694854_81694923_81695068_81695163_81695224_81695785_81696000_81696356_81696530_81696606_81696999_81700466_81700601_81700694_81700815_81701044_81701132_81701507
H1_mix_00036715	chr17	+	2401	1	FSM	ENSG00000185359.14	ENST00000571647.1	2401	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGAGTGATCCGCCCTTCTC	2175	False	NA	NA	False	NA	NA	NA	81695955	81698356	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81696000_81698400
H1_mix_00036723	chr17	+	338	1	FSM	ENSG00000278876.1	ENST00000623802.1	325	1	-21	8	-21	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTACTTTGAGAGTTT	1645	False	NA	NA	False	NA	NA	NA	81862756	81863094	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81862800_81863100
H1_mix_00036724	chr17	+	648	4	FSM	ENSG00000141552.18	ENST00000344877.10	638	4	-10	0	0	0	multi-exon	FALSE	canonical	3	749	junction_1	1280.11622736201	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGGCCTCTGGGTGCCT	47	False	NA	24	True	ATTAAA	-15	NA	81891712	81900255	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81891842_81893551_81893615_81894466_81894587_81899919
H1_mix_00036725	chr17	+	747	4	FSM	ENSG00000141552.18	ENST00000571874.6	636	4	-113	2	-14	0	multi-exon	FALSE	canonical	3	257	junction_1	1475.81804057576	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGAGGCCTCTGGGTG	NA	False	NA	21	True	ATTAAA	-12	NA	81891632	81900252	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81891864_81893551_81893615_81894466_81894587_81899919
H1_mix_00036726	chr17	+	741	4	FSM	ENSG00000141552.18	ENST00000574924.6	722	4	-19	0	0	0	multi-exon	FALSE	canonical	3	730	junction_1	1287.45045212104	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTCGTCAAACCCTGAGT	47	False	NA	27	True	AATAAA	-21	NA	81891712	81900356	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81891834_81893551_81893615_81894466_81894587_81899919
H1_mix_00036727	chr17	+	592	4	FSM	ENSG00000141552.18	ENST00000572639.5	578	4	-14	0	-14	0	multi-exon	FALSE	canonical	3	29	junction_1	1569.85908780233	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGGCCTCTGGGTGCCT	NA	False	NA	24	True	ATTAAA	-15	NA	81891632	81900255	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81891706_81893551_81893615_81894466_81894587_81899919
H1_mix_00036728	chr17	+	582	3	FSM	ENSG00000141552.18	ENST00000579978.5	575	3	-7	0	0	0	multi-exon	FALSE	canonical	3	659	junction_1	1606.5	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGAGGCCTCTGGGTG	47	False	NA	21	True	ATTAAA	-12	NA	81891712	81900252	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81891842_81894466_81894587_81899919
H1_mix_00036729	chr17	+	678	3	FSM	ENSG00000141552.18	ENST00000571024.6	668	3	-10	0	0	0	multi-exon	FALSE	canonical	3	780	junction_1	1546	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTCGTCAAACCCTGAGT	47	False	NA	27	True	AATAAA	-21	NA	81891712	81900356	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81891834_81894466_81894587_81899919
H1_mix_00036730	chr17	+	708	3	FSM	ENSG00000141552.18	ENST00000572851.6	686	3	-22	0	0	0	multi-exon	FALSE	canonical	3	235	junction_1	1818.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTCGTCAAACCCTGAGT	47	False	NA	27	True	AATAAA	-21	NA	81891712	81900356	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81891864_81894466_81894587_81899919
H1_mix_00036731	chr17	+	964	4	FSM	ENSG00000141552.18	ENST00000612413.4	964	4	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_3	747.595255915035	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCGCCTCCAGACTGAAG	47	False	NA	NA	False	NA	NA	NA	81891712	81900533	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81891842_81893551_81893615_81894466_81894625_81899919
H1_mix_00036732	chr17	+	610	5	FSM	ENSG00000141552.18	ENST00000578550.5	599	5	-11	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	1598.0032071307	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTGGAAACAAGGGCTGGA	-3	True	NA	-72	True	NA	NA	NA	81891738	81900159	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81891842_81893103_81893188_81893551_81893615_81894466_81894587_81899919
H1_mix_00036733	chr17	+	563	3	FSM	ENSG00000141552.18	ENST00000579133.5	563	3	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_2	176	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGGCCTCTGGGTGCC	30	False	NA	23	True	ATTAAA	-14	NA	81891771	81900254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81891842_81894466_81894625_81899919
H1_mix_00036734	chr17	+	687	4	FSM	ENSG00000141552.18	ENST00000392376.7	687	4	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	1535.83426478539	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGGCCTCTGGGTGCC	13	True	NA	23	True	ATTAAA	-14	NA	81891937	81900254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81892107_81893551_81893615_81894466_81894587_81899919
H1_mix_00036735	chr17	+	3454	1	FSM	ENSG00000141552.18	ENST00000573956.1	2136	1	-1321	3	-1321	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGAGGCCTCTGGGTG	2293	False	NA	21	True	ATTAAA	-12	NA	81896798	81900252	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81896800_81900300
H1_mix_00036742	chr17	+	5527	9	FSM	ENSG00000169696.16	ENST00000577733.5	5503	9	-24	0	-24	0	multi-exon	FALSE	canonical	3	404	junction_8	24.3040634462635	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGCCTTCCTGTCATGCTT	6814	False	NA	19	True	AATAAA	-17	NA	82004320	82017404	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_82009192_82009485_82009568_82010801_82010869_82011542_82011606_82012230_82012284_82016475_82016528_82016799_82016870_82016940_82017114_82017308
H1_mix_00036744	chr17	+	2709	17	FSM	ENSG00000169683.8	ENST00000306688.8	2698	17	-11	0	-11	0	multi-exon	FALSE	canonical	3	128	junction_12	14.1574571781094	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTGGCCCCGCCTCTCC	-4	True	NA	15	True	AATACA	-22	NA	82023293	82031151	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_82023864_82024277_82024340_82024692_82024764_82024999_82025179_82025378_82025508_82026898_82027012_82027385_82027445_82027673_82027752_82028010_82028147_82028233_82028312_82028396_82028509_82028612_82028684_82029092_82029186_82029542_82029636_82030064_82030239_82030318_82030467_82030608
H1_mix_00036746	chr17	+	2721	16	NIC	ENSG00000169683.8	novel	2698	17	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	51.2144076950574	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTGGCCCCGCCTCTCC	-4	True	NA	15	True	AATACA	-22	NA	82023293	82031151	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_82023864_82024692_82024764_82024999_82025179_82025378_82025508_82026898_82027012_82027385_82027445_82027673_82027752_82028010_82028147_82028233_82028312_82028396_82028509_82028612_82028684_82029018_82029186_82029542_82029636_82030064_82030239_82030318_82030467_82030608
H1_mix_00036749	chr17	+	1289	7	FSM	ENSG00000169683.8	ENST00000583302.1	1289	7	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_2	15.7206516687092	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGCAGGGGCCCCTGG	3414	False	NA	NA	False	NA	NA	NA	82026805	82029232	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_82027012_82027385_82027445_82027673_82027752_82028010_82028147_82028233_82028312_82028396_82028509_82028612
H1_mix_00036763	chr17	+	1843	13	FSM	ENSG00000169727.13	ENST00000623691.3	1839	13	-4	0	0	0	multi-exon	TRUE	canonical	3	274	junction_5	364.990601096643	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGGCTGTTCTTTCCT	-10	True	NA	28	True	ATTAAA	-17	NA	82051892	82057470	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_82051965_82053273_82053367_82053867_82054050_82054509_82054811_82054897_82054976_82055164_82055223_82055739_82055826_82056000_82056096_82056285_82056392_82056469_82056551_82056628_82056767_82056839_82056975_82057052
H1_mix_00036764	chr17	+	1858	13	FSM	ENSG00000169727.13	ENST00000306823.10	1842	13	-16	0	0	0	multi-exon	FALSE	canonical	3	217	junction_3	381.132404450504	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGGCTGTTCTTTCCT	-10	True	NA	28	True	ATTAAA	-17	NA	82051892	82057470	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_82051965_82053273_82053367_82053867_82054050_82054497_82054811_82054897_82054976_82055161_82055223_82055739_82055826_82056000_82056096_82056285_82056392_82056469_82056551_82056628_82056767_82056839_82056975_82057052
H1_mix_00036765	chr17	+	1792	13	FSM	ENSG00000169727.13	ENST00000578552.6	1841	13	3	46	0	0	multi-exon	FALSE	canonical	3	960	junction_1	178.389301964988	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCAGACAAGTGGGCGGT	-2	True	NA	-18	True	NA	NA	NA	82051900	82057424	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_82051965_82053273_82053367_82053867_82054050_82054509_82054811_82054897_82054976_82055161_82055223_82055739_82055826_82056000_82056096_82056285_82056392_82056469_82056551_82056628_82056767_82056839_82056975_82057052
H1_mix_00036766	chr17	+	1859	13	FSM	ENSG00000169727.13	ENST00000584460.5	1855	13	-4	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	522.785249090548	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCGTTGCTCTTGGCTGTT	22	True	NA	21	True	ATTAAA	-10	NA	82051924	82057463	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_82051965_82053233_82053367_82053867_82054050_82054497_82054811_82054897_82054976_82055161_82055223_82055739_82055826_82056000_82056096_82056285_82056392_82056469_82056551_82056628_82056767_82056839_82056975_82057052
H1_mix_00036767	chr17	+	2276	13	FSM	ENSG00000169727.13	ENST00000392358.6	2276	13	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	370.455537892951	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGGCTGTTCTTTCCT	55	False	NA	28	True	ATTAAA	-17	NA	82051957	82057470	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_82052460_82053273_82053367_82053867_82054050_82054509_82054811_82054897_82054976_82055161_82055223_82055739_82055826_82056000_82056096_82056285_82056392_82056469_82056551_82056628_82056767_82056839_82056975_82057052
H1_mix_00036770	chr17	+	2592	5	FSM	ENSG00000141526.18	ENST00000582743.6	2599	5	-14	21	-14	-21	multi-exon	FALSE	canonical	3	21	junction_3	3.34477204006491	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAATGAAAAGCAAGCGAAAA	540	False	NA	NA	False	NA	NA	NA	82229027	82240065	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_82229107_82235982_82236232_82236728_82236873_82237137_82237894_82238701
H1_mix_00036775	chr17	+	2235	12	FSM	ENSG00000169660.17	ENST00000644886.1	2235	12	0	0	0	0	multi-exon	FALSE	canonical	1	34	junction_9	17.7116481259888	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGACACTGATTCTTTG	266	False	NA	-27	True	AAAACA	-42	NA	82418660	82442598	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_82418741_82419748_82419884_82424393_82424504_82428557_82428646_82433657_82433823_82435688_82435873_82436666_82437364_82439630_82439714_82440996_82441076_82441164_82441267_82441799_82441890_82442176
H1_mix_00036780	chr17	+	1487	10	FSM	ENSG00000141562.19	ENST00000345415.11	1487	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	191.611876226687	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAATGGATTACTTTGGTT	449	False	NA	20	True	ATTAAA	-18	NA	82458648	82488262	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_82458831_82459991_82460073_82468763_82468897_82472563_82472699_82478799_82478919_82481081_82481212_82483715_82483780_82484812_82484951_82485496_82485655_82487915
H1_mix_00036781	chr17	+	1477	12	FSM	ENSG00000141562.19	ENST00000582907.5	1454	12	-23	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	269.532592058582	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGGATCAACTCCCCCAAG	-2	True	NA	NA	False	NA	NA	NA	82458702	82488065	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_82458831_82459991_82460073_82464286_82464431_82468763_82468897_82472563_82472699_82478570_82478668_82478799_82478919_82481081_82481212_82483715_82483780_82484812_82484951_82485496_82485655_82487915
H1_mix_00036782	chr17	+	3038	10	FSM	ENSG00000141562.19	ENST00000577812.5	2598	10	-484	44	0	0	multi-exon	FALSE	canonical	0	0	junction_2	198.584434882943	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGGGGCTGCCCTGAGTG	28	False	NA	-27	True	NA	NA	NA	82458227	82488215	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_82458831_82459991_82460073_82464286_82464431_82468763_82468897_82472563_82472699_82478799_82478919_82481081_82481212_82483715_82484951_82485496_82485655_82487915
H1_mix_00036784	chr17	+	3814	11	FSM	ENSG00000141562.19	ENST00000309794.16	3814	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	188.424414553953	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTGAATGGTTGAGTG	0	True	NA	20	True	AATAAA	-14	NA	82458740	82490537	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_82458831_82459991_82460073_82464286_82464431_82468763_82468897_82472563_82472699_82478799_82478919_82481081_82481212_82483715_82483780_82484812_82484951_82485496_82485655_82487915
H1_mix_00036793	chr17	+	7081	38	FSM	ENSG00000141556.22	ENST00000684544.1	7072	38	-9	0	0	0	multi-exon	FALSE	canonical	3	35	junction_17	88.5924756107591	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACCATAAAAACATAGAAAGA	170	False	NA	-10	True	AATAAA	-6	NA	82752047	82945900	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_82752378_82756164_82756216_82763964_82764063_82766266_82766369_82768419_82768567_82772451_82772508_82781588_82781722_82797756_82797803_82800863_82800997_82805874_82806012_82807607_82807669_82809707_82809783_82814839_82814935_82870223_82870381_82884144_82884203_82889667_82889698_82893546_82893633_82903404_82903479_82905935_82906054_82907760_82907822_82909284_82909308_82911757_82911790_82920555_82920619_82921500_82921578_82923651_82923734_82924938_82925058_82926399_82926492_82927185_82927324_82927904_82927989_82929112_82929272_82929361_82929501_82930521_82930644_82932657_82932736_82937270_82937361_82938048_82938137_82939366_82939477_82941398_82941484_82942448
H1_mix_00036794	chr17	+	8000	39	FSM	ENSG00000141556.22	ENST00000355528.9	7159	39	-300	-541	-277	541	multi-exon	FALSE	canonical	3	250	junction_13	66.5014943701463	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGATCACCTACTACCAT	1027	False	NA	NA	False	ACTAAA	-18	NA	82751764	82946455	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_82752378_82756164_82756216_82763964_82764063_82766266_82766369_82768419_82768567_82772451_82772508_82781588_82781722_82797756_82797803_82800863_82800997_82805874_82806012_82807607_82807669_82809707_82809783_82814839_82814935_82870223_82870381_82884144_82884203_82889667_82889698_82893546_82893633_82900650_82900732_82903404_82903479_82905935_82906054_82907760_82907822_82909284_82909308_82911757_82911790_82920555_82920619_82921500_82921578_82923651_82923734_82924938_82925058_82926399_82926492_82927185_82927324_82927904_82927989_82929112_82929272_82929361_82929501_82930521_82930644_82932657_82932736_82937270_82937361_82938048_82938137_82939366_82939477_82941398_82941484_82942448
H1_mix_00036795	chr17	+	3975	40	FSM	ENSG00000141556.22	ENST00000539345.6	3975	40	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_35	105.861047948314	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTTTGTCTCTGAGCCT	54	False	NA	28	True	TATAAA	-21	NA	82752157	82942709	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_82752378_82756164_82756216_82763964_82764063_82766266_82766369_82768419_82768567_82772451_82772508_82781588_82781722_82797756_82797803_82800863_82800997_82805874_82806012_82807607_82807669_82809707_82809783_82814839_82814935_82870223_82870381_82884144_82884203_82889667_82889698_82893546_82893633_82900650_82900732_82903404_82903479_82905935_82906054_82907760_82907822_82909284_82909308_82911757_82911790_82920555_82920619_82921500_82921578_82923651_82923734_82924938_82925058_82926399_82926492_82927185_82927324_82927904_82927989_82929112_82929272_82929361_82929501_82930521_82930644_82932657_82932736_82937270_82937361_82937845_82937960_82938048_82938137_82939366_82939477_82941398_82941484_82942448
H1_mix_00036799	chr17	+	1380	2	FSM	ENSG00000141556.22	ENST00000572794.1	1380	2	0	0	0	0	multi-exon	FALSE	canonical	3	525	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCCTGCCTTTTGTCTC	NA	False	NA	21	True	TATAAA	-14	NA	82939400	82942702	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_82939477_82941398
H1_mix_00036802	chr17	-	5029	9	FSM	ENSG00000272636.4	ENST00000613549.3	6062	9	133	900	133	-900	multi-exon	FALSE	canonical	0	0	junction_4	2.48746859276655	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCCTTGGCGAGACTCTC	5750	False	NA	-5	True	AGTAAA	-24	NA	181517	143688	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_147578_148172_148270_149110_149193_156219_156378_161414_161542_162080_162191_164129_164205_172536_172617_181106
H1_mix_00036803	chr17	-	2701	9	ISM	ENSG00000181031.16	ENST00000331302.12	2719	10	18873	-78	132	78	3prime_fragment	FALSE	canonical	1	1	junction_8	16.1554944214035	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCTACATACAAAAGTACAC	7506	False	NA	NA	False	NA	NA	NA	333934	212310	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_213924_215653_215803_219622_219737_247110_247286_281767_281855_319419_319550_321271_321416_327466_327580_333758
H1_mix_00036804	chr17	-	2495	9	FSM	ENSG00000181031.16	ENST00000618002.4	2578	9	83	0	31	0	multi-exon	FALSE	canonical	2	3	junction_8	15.8094117537624	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGCAGTGAAAGGAGGGGC	52	False	NA	81	True	NA	NA	NA	352759	212388	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_213924_215653_215803_219622_219737_247110_247286_281767_281855_319419_319550_321271_321416_327466_327580_352711
H1_mix_00036809	chr17	-	3650	3	NNC	ENSG00000183688.4	novel	3621	2	NA	NA	0	39669	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	179	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTTACCAATACAATCAGG	NA	False	NA	NA	False	AAAAAG	-2	NA	445939	400308	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_400338_439977_443495_445835
H1_mix_00036810	chr17	-	3651	3	NNC	ENSG00000183688.4	novel	3621	2	NA	NA	-2	39669	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	179	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTTACCAATACAATCAGG	NA	False	NA	NA	False	AAAAAG	-2	NA	445941	400308	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_400337_439977_443495_445835
H1_mix_00036811	chr17	-	3621	2	FSM	ENSG00000183688.4	ENST00000329099.4	3621	2	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGAGAGATGCTTCTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	445939	439977	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_443495_445835
H1_mix_00036812	chr17	-	13031	22	FSM	ENSG00000141252.21	ENST00000437048.7	13089	22	0	58	0	-43	multi-exon	FALSE	canonical	3	11	junction_3	11.2657045839682	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACAGCTCTTCTTGCAAT	-4	True	NA	NA	False	NA	NA	NA	714839	508725	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_519299_519825_519931_521600_521739_532841_532912_537027_537177_551871_551951_553379_553463_560425_560574_562502_562746_586269_586365_601794_601897_623532_623675_627173_627317_628087_628232_631549_631629_653290_653411_655837_655954_661808_661896_697417_697485_699330_699381_710532_710614_714622
H1_mix_00036813	chr17	-	2229	19	FSM	ENSG00000141252.21	ENST00000571805.6	3070	19	4	837	1	0	multi-exon	FALSE	canonical	3	13	junction_1	10.9036181558641	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGATGGACGTAGTATCA	-18	True	NA	NA	False	NA	NA	NA	714853	532841	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_532912_537027_537177_551871_551951_553379_553463_560425_560574_562502_562746_586269_586365_601794_601897_623532_623675_627173_627317_628087_628232_631549_631629_653290_653411_655837_655954_661808_661896_697417_697485_699330_699381_710532_710614_714622
H1_mix_00036814	chr17	-	2142	18	FSM	ENSG00000141252.21	ENST00000291074.10	2695	18	4	549	1	0	multi-exon	FALSE	canonical	3	9	junction_14	12.3856709261411	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGATGGACGTAGTATCA	-18	True	NA	NA	False	NA	NA	NA	714853	532841	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_532912_537027_537177_551871_551951_553379_553463_560425_560574_562502_562746_586269_586365_601794_601897_623532_623675_627173_627317_628087_628232_631549_631629_653290_653411_655837_655954_697417_697485_699330_699381_710532_710614_714622
H1_mix_00036815	chr17	-	2609	18	FSM	ENSG00000141252.21	ENST00000680069.1	2729	18	0	120	0	-62	multi-exon	FALSE	canonical	3	18	junction_2	10.1292682916669	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAGGCATAAGCTCTCC	6553	False	NA	NA	False	AATGAA	-24	NA	714761	536485	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_537177_551871_551951_553379_553463_560425_560574_562502_562746_586269_586365_601794_601897_623532_623675_627173_627317_628087_628232_631549_631629_653290_653411_655837_655954_661808_661896_697417_697485_699330_699381_710532_710614_714622
H1_mix_00036816	chr17	-	2251	17	FSM	ENSG00000141252.21	ENST00000679361.1	2237	17	0	-14	0	0	multi-exon	FALSE	canonical	3	18	junction_1	10.3772587902586	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGATGTTGTCTGTGGTTT	11	True	NA	NA	False	AGTAAA	-20	NA	714824	551601	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_551951_553379_553463_560425_560574_562502_562746_586269_586365_601794_601897_623532_623675_627173_627317_628087_628232_631549_631629_653290_653411_655837_655954_661808_661896_697417_697485_699330_699381_710532_710614_714622
H1_mix_00036821	chr17	-	3744	2	FSM	ENSG00000179409.11	ENST00000319004.6	3744	2	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_1	0	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAGAGTTATTTCGTCTT	8	True	NA	-10	True	AAAAAG	-25	NA	752264	744420	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_748033_752132
H1_mix_00036822	chr17	-	2187	9	FSM	ENSG00000167699.14	ENST00000301329.11	1765	9	-61	-361	-47	354	multi-exon	FALSE	canonical	3	771	junction_5	28.6792607994	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCTCCTCTAGGTAATTG	NA	False	NA	NA	False	NA	NA	NA	782341	758968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_760239_769868_769956_770043_770158_770420_770508_771324_771462_775774_775920_776867_776989_778694_778745_782165
H1_mix_00036823	chr17	-	2311	7	FSM	ENSG00000167699.14	ENST00000571073.5	2311	7	0	0	0	0	multi-exon	FALSE	canonical	3	771	junction_5	29.0311135776008	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAAGCTGTGATACCAG	4635	False	NA	-13	True	AATAAA	-24	NA	777692	759322	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_760239_769868_769956_770043_770158_770420_770508_771324_771462_775774_775920_776867
H1_mix_00036824	chr17	-	2737	7	FSM	ENSG00000167699.14	ENST00000576239.5	2737	7	0	0	0	0	multi-exon	FALSE	canonical	3	771	junction_3	31.2303271409912	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGGTTTTGAAAAT	-14	True	NA	87	True	ATTAAA	-17	NA	782294	759451	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_760239_769868_769956_770043_771462_775774_775920_776867_776989_778694_778745_782165
H1_mix_00036825	chr17	-	1063	9	FSM	ENSG00000167699.14	ENST00000575851.5	1063	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	274.847656666379	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCTCTTCTGATTTGTT	0	True	NA	-38	True	NA	NA	NA	782280	760097	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_760239_769868_769956_770043_770158_770420_770508_771324_771462_775774_775920_776867_776989_778694_778811_782165
H1_mix_00036826	chr17	-	3046	8	FSM	ENSG00000167693.17	ENST00000336868.8	3045	8	0	-1	0	1	multi-exon	FALSE	canonical	3	403	junction_5	21.9925775976295	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTTGCTTGTGGTCCT	-15	True	NA	-2	True	NA	NA	NA	979776	799308	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_801132_803681_803807_805067_805248_819438_819546_822356_822458_823631_823766_825960_826079_979318
H1_mix_00036829	chr17	-	5395	23	FSM	ENSG00000159842.16	ENST00000302538.10	5395	23	0	0	0	0	multi-exon	TRUE	canonical	3	62	junction_22	20.5812740853234	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGGTGTGGATGTTT	-11	True	NA	-1	True	AATAAA	-34	NA	1179981	1003518	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1006170_1007164_1007313_1009678_1009785_1010728_1010864_1011845_1011986_1012687_1012798_1013104_1013165_1050049_1050182_1050536_1050635_1056034_1056110_1056997_1057103_1057969_1058046_1058744_1058868_1067076_1067243_1069968_1070091_1072613_1072755_1073624_1073678_1079329_1079391_1083519_1083628_1091664_1091851_1100636_1100736_1125182_1125368_1179666
H1_mix_00036831	chr17	-	5996	23	FSM	ENSG00000159842.16	ENST00000574139.7	6026	23	30	0	30	0	multi-exon	FALSE	canonical	2	12	junction_22	26.5439367561106	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGGTGTGGATGTTT	13	True	NA	-1	True	AATAAA	-34	NA	1229708	1003518	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1006170_1007164_1007313_1009678_1009785_1010728_1010864_1011845_1011986_1012687_1012798_1013104_1013165_1050049_1050182_1050536_1050635_1056034_1056110_1056997_1057103_1057969_1058046_1058744_1058868_1067076_1067243_1069968_1070091_1072613_1072755_1073624_1073678_1079329_1079391_1083519_1083628_1091664_1091851_1100636_1100736_1125182_1125368_1228792
H1_mix_00036834	chr17	-	2205	6	FSM	ENSG00000108953.17	ENST00000264335.13	2052	6	22	-175	0	175	multi-exon	FALSE	canonical	3	9776	junction_2	536.426472128287	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGGATAGCAGTCTCCCT	-2	True	NA	NA	False	NA	NA	NA	1400200	1344099	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1345500_1354210_1354348_1361091_1361299_1361901_1362009_1364858_1365059_1400046
H1_mix_00036835	chr17	-	1819	7	FSM	ENSG00000108953.17	ENST00000571732.5	1818	7	0	-1	0	0	multi-exon	FALSE	canonical	3	292	junction_6	4821.76792150855	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCGCGCCTCCATCCTTTA	-22	True	NA	-16	True	AATAAA	-26	NA	1400220	1344538	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1345500_1354210_1354348_1361091_1361299_1361901_1362009_1364858_1365059_1369708_1369742_1400046
H1_mix_00036839	chr17	-	5017	33	NNC	ENSG00000197879.17	novel	4724	32	NA	NA	173	50387	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	65.6336601428718	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCCGGGCGTTGTGGCGC	6668	False	NA	NA	False	NA	NA	NA	1486028	1413798	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_1413827_1464188_1465753_1467241_1467342_1467479_1467578_1467839_1467911_1467987_1468124_1468252_1468309_1468402_1468497_1469530_1469615_1470174_1470335_1470434_1470520_1470620_1470690_1471070_1471148_1471222_1471337_1471906_1472025_1472122_1472229_1474609_1474691_1474811_1474859_1474937_1475033_1477504_1477597_1477890_1477972_1478086_1478193_1478409_1478493_1478615_1478736_1479430_1479503_1479591_1479706_1480526_1480626_1480705_1480886_1482477_1482559_1482860_1483060_1483609_1483726_1484147_1484304_1485693
H1_mix_00036840	chr17	-	4956	33	NNC	ENSG00000197879.17	novel	4931	32	NA	NA	0	50387	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	71.720479281984	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCCGGGCGTTGTGGCGC	10	True	NA	NA	False	NA	NA	NA	1492686	1413798	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_1413827_1464188_1465753_1467241_1467342_1467479_1467578_1467839_1467911_1467987_1468124_1468252_1468309_1468402_1468497_1469530_1469615_1470174_1470335_1470434_1470520_1470620_1470690_1471070_1471148_1471222_1471337_1471906_1472025_1472122_1472229_1474609_1474691_1474811_1474859_1474937_1475033_1477504_1477597_1477890_1477972_1478086_1478193_1478409_1478493_1478615_1478736_1479430_1479503_1479591_1479706_1480526_1480626_1480705_1480886_1482477_1482559_1482860_1483060_1483609_1483726_1484147_1484304_1492412
H1_mix_00036841	chr17	-	2299	4	NNC	ENSG00000167193.8	novel	3850	3	NA	NA	-116	550	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	151.684614322687	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCCGTCTCTACTAAAAA	7004	False	NA	NA	False	NA	NA	NA	1456348	1420138	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_1420175_1422395_1423651_1436619_1437156_1455876
H1_mix_00036842	chr17	-	3675	3	FSM	ENSG00000167193.8	ENST00000398970.5	3675	3	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_1	82.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTGAATATTTTTCACAA	8	True	NA	2	True	AAAAAG	-4	NA	1456223	1420688	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1423651_1436789_1437156_1455876
H1_mix_00036843	chr17	-	3854	3	FSM	ENSG00000167193.8	ENST00000300574.3	3850	3	0	-4	0	0	multi-exon	FALSE	canonical	3	203	junction_1	84	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTGAATATTTTTCACAA	-1	True	NA	2	True	AAAAAG	-4	NA	1456232	1420688	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1423651_1436619_1437156_1455876
H1_mix_00036846	chr17	-	4714	32	FSM	ENSG00000197879.17	ENST00000361007.7	4714	32	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_31	43.533713178898	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAAAGCAATACGTGTT	-13	True	NA	-26	True	NA	NA	NA	1491682	1464211	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1465753_1467241_1467342_1467479_1467578_1467839_1467911_1467987_1468124_1468252_1468309_1468402_1468497_1469530_1469615_1470174_1470335_1470434_1470520_1470620_1470690_1471070_1471148_1471222_1471337_1471906_1472025_1472122_1472229_1474609_1474691_1474811_1474859_1474937_1475033_1477504_1477597_1477890_1477972_1478086_1478193_1478409_1478493_1478615_1478736_1479430_1479503_1479591_1479706_1480526_1480626_1480705_1480886_1482477_1482559_1482860_1483060_1483609_1483726_1484147_1484304_1491599
H1_mix_00036849	chr17	-	2975	12	NIC	ENSG00000132376.20	novel	2706	12	NA	NA	-146	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_10	45.0813772916533	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGCGTGTGACTGATGA	4689	False	NA	-6	True	NA	NA	NA	1516888	1494576	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_1495880_1496059_1496165_1496318_1496403_1496665_1496804_1497935_1498123_1506979_1507090_1508114_1508227_1509177_1509354_1509682_1509800_1513452_1513555_1513871_1513980_1516455
H1_mix_00036850	chr17	-	2829	12	FSM	ENSG00000132376.20	ENST00000421807.7	2706	12	-123	0	0	0	multi-exon	FALSE	canonical	3	113	junction_7	26.3027510109456	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGCGTGTGACTGATGA	10	True	NA	-6	True	NA	NA	NA	1516735	1494576	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1495880_1496059_1496165_1496318_1496403_1496665_1496804_1497935_1498123_1506979_1507090_1508114_1508227_1509177_1509354_1509682_1509800_1513452_1513562_1513871_1513980_1516455
H1_mix_00036851	chr17	-	949	7	FSM	ENSG00000132376.20	ENST00000449479.5	949	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	47.5514341412421	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAACTTCTGGGCTGCCTG	7	True	NA	NA	False	NA	NA	NA	1516594	1497935	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1498123_1506979_1507090_1508114_1508227_1509177_1509354_1509682_1509800_1513871_1513980_1516455
H1_mix_00036856	chr17	-	3889	12	FSM	ENSG00000174238.16	ENST00000313486.12	3888	12	0	-1	0	1	multi-exon	FALSE	canonical	0	0	junction_8	162.713559605028	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACCAAACAAGCAAAACATT	-7	True	NA	NA	False	NA	NA	NA	1562792	1517716	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1520539_1521578_1521646_1534098_1534222_1535181_1535293_1535440_1535519_1538868_1538953_1541565_1541641_1543019_1543028_1548295_1548388_1553003_1553150_1558528_1558560_1562540
H1_mix_00036858	chr17	-	1669	11	NIC	ENSG00000174238.16	novel	3888	12	NA	NA	1	338	combination_of_known_junctions	FALSE	canonical	3	16	junction_7	134.551700100742	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACACCTGTGGCTTCTTGG	47	True	NA	NA	False	NA	NA	NA	1562738	1519874	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_1520539_1521578_1521646_1534098_1534222_1535181_1535293_1535440_1535519_1538868_1538953_1541565_1541641_1548295_1548388_1553003_1553150_1558528_1558560_1562540
H1_mix_00036859	chr17	-	1350	11	NIC	ENSG00000174238.16	novel	3888	12	NA	NA	0	80	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	182.653250723878	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGGAAGATCTTCGCAAT	-7	True	NA	55	True	NA	NA	NA	1562792	1520132	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_1520539_1521578_1521646_1534098_1534222_1535181_1535293_1535440_1535519_1538868_1538953_1541565_1541641_1548295_1548388_1553003_1553150_1558528_1558560_1562655
H1_mix_00036860	chr17	-	8138	14	FSM	ENSG00000167703.15	ENST00000301335.10	8133	14	0	-5	0	5	multi-exon	FALSE	canonical	3	46	junction_13	10.8992155409591	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGGCTTCCTCCTTGGCTC	-1	True	NA	NA	False	AATAAA	-22	NA	1628834	1569262	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1575766_1576596_1576721_1578249_1578324_1583203_1583337_1585912_1586052_1590801_1590949_1591268_1591472_1591565_1591700_1593186_1593280_1613194_1613272_1614978_1615035_1616561_1616770_1627714_1627921_1628793
H1_mix_00036861	chr17	-	3240	14	NIC	ENSG00000167703.15	novel	3261	15	NA	NA	-25	-34	intron_retention	FALSE	canonical	2	3	junction_13	20.017743608399	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGGATGCCCCTTCTGG	519	False	NA	-30	True	AATAAA	-16	NA	1628366	1574405	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_1575766_1576596_1576721_1578249_1578324_1583203_1583337_1585912_1586052_1590801_1590949_1591268_1591472_1591565_1591700_1593186_1593280_1613194_1613272_1614978_1615035_1616561_1616770_1627714_1627921_1628080
H1_mix_00036862	chr17	-	3424	11	FSM	ENSG00000074660.17	ENST00000263071.9	3428	11	0	4	0	3	multi-exon	FALSE	canonical	1	1	junction_2	2.69072480941474	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTATAAAGTAAAACGGAGA	-5	True	NA	NA	False	AATAAA	-21	NA	1645732	1633861	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1635618_1636708_1636856_1636940_1637063_1638805_1638927_1639638_1639743_1639911_1640041_1640447_1640667_1643441_1643968_1644833_1644936_1645177_1645240_1645596
H1_mix_00036863	chr17	-	1017	5	ISM	ENSG00000167705.12	ENST00000301336.7	1560	8	868	6	34	-6	3prime_fragment	FALSE	canonical	3	54	junction_3	17.1373130916139	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAACTGTTCCTCGCCTG	7	True	NA	-12	True	AATAAA	-18	NA	1648998	1646155	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_1646620_1646905_1646990_1647834_1647958_1648349_1648496_1648798
H1_mix_00036864	chr17	-	967	4	FSM	ENSG00000167705.12	ENST00000574810.5	978	4	0	11	0	-6	multi-exon	FALSE	canonical	0	0	junction_1	29.3181779030614	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAACTGTTCCTCGCCTG	1035	False	NA	-12	True	AATAAA	-18	NA	1649032	1646155	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1646620_1647834_1647958_1648349_1648496_1648798
H1_mix_00036866	chr17	-	7280	43	FSM	ENSG00000174231.17	ENST00000304992.11	7280	43	0	0	0	0	multi-exon	FALSE	canonical	3	628	junction_28	197.26541078012	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCAGGGGCTGGTTTGTTT	-21	True	NA	-8	True	AATAAA	-30	NA	1684867	1650628	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1650957_1651107_1651311_1651413_1651554_1651647_1651789_1653541_1653684_1653776_1654017_1655349_1655544_1656391_1656566_1656647_1656762_1658252_1658382_1658525_1658764_1659356_1659549_1659840_1660002_1660431_1660579_1660697_1660828_1660992_1661163_1661270_1661407_1661610_1661791_1661905_1662154_1673080_1673198_1673356_1673568_1673745_1673893_1674441_1674681_1675151_1675340_1675619_1675813_1675927_1676055_1676206_1676371_1676504_1676712_1676975_1677173_1677564_1677695_1678517_1678653_1678761_1678882_1679016_1679207_1679290_1679411_1679608_1679800_1680725_1680832_1680928_1681055_1681477_1681691_1681819_1682039_1682128_1682294_1683532_1683702_1684471_1684583_1684779
H1_mix_00036867	chr17	-	7450	42	FSM	ENSG00000174231.17	ENST00000572621.5	7445	42	0	-5	0	3	multi-exon	FALSE	canonical	3	628	junction_28	198.336256575088	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGGGCTGGTTTGTTTTTT	9	True	NA	-5	True	AATAAA	-33	NA	1684837	1650625	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1650957_1651107_1651311_1651413_1651554_1651647_1651789_1653541_1653684_1653776_1654017_1655349_1655544_1656391_1656566_1656647_1656762_1658252_1658382_1658525_1658764_1659356_1659549_1659840_1660002_1660431_1660579_1660697_1660828_1660992_1661163_1661270_1661407_1661610_1661791_1661905_1662154_1673080_1673198_1673356_1673568_1673745_1673893_1674441_1674681_1675151_1675340_1675619_1675813_1675927_1676055_1676206_1676371_1676504_1676712_1676975_1677173_1677564_1677695_1678517_1678653_1678761_1678882_1679016_1679207_1679290_1679411_1679608_1679800_1680725_1680832_1680928_1681055_1681477_1681691_1681819_1682039_1682128_1682294_1683532_1683702_1684471
H1_mix_00036868	chr17	-	1369	4	FSM	ENSG00000186594.15	ENST00000334146.8	1488	4	59	60	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3.55902608401044	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGTTATTATTTAAACC	1	True	NA	NA	False	AATATA	-11	NA	1716210	1711506	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1712400_1713702_1714015_1714370_1714454_1716129
H1_mix_00036869	chr17	-	2619	2	FSM	ENSG00000186594.15	ENST00000574306.2	2633	2	11	3	3	0	multi-exon	FALSE	canonical	3	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGTTATTATTTAAACC	41	False	NA	NA	False	AATATA	-11	NA	1716240	1711506	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1714015_1716129
H1_mix_00036870	chr17	-	4355	11	FSM	ENSG00000186532.12	ENST00000305513.12	4405	11	0	50	0	-50	multi-exon	FALSE	canonical	3	88	junction_1	16.6916146612603	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCCTTCTGAGTTGTTG	-35	True	NA	-12	True	AATAAA	-34	NA	1829902	1779534	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1781440_1783034_1783159_1783359_1783477_1784325_1784462_1786809_1786974_1787421_1787605_1799856_1801025_1804625_1804716_1811970_1812116_1827860_1828007_1829725
H1_mix_00036871	chr17	-	3016	6	FSM	ENSG00000186532.12	ENST00000491788.1	3016	6	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_2	10.0598210719674	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGCTT	NA	False	NA	NA	False	NA	NA	NA	1800805	1781691	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1783159_1783359_1783477_1784325_1784462_1786809_1786974_1787421_1787605_1799856
H1_mix_00036872	chr17	-	515	4	FSM	ENSG00000186532.12	ENST00000576633.1	515	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	66.2335933563089	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTCGGACGCTCCTCTTT	-12	True	NA	NA	False	AAAAAG	-28	NA	1829810	1812061	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1812116_1814565_1814796_1827860_1828007_1829725
H1_mix_00036873	chr17	-	460	3	NNC	ENSG00000186532.12	novel	4405	11	NA	NA	0	-10914	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	70	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGGGTATGTCCATTT	-12	True	NA	-24	True	ATTAAA	-13	NA	1829810	1822975	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_1823205_1827860_1828007_1829725
H1_mix_00036874	chr17	-	408	1	FSM	ENSG00000108958.4	ENST00000451056.1	408	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGGAGGCTCCCAGCAT	7	True	NA	NA	False	GGGGCT	-14	NA	1858446	1858038	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1858000_1858400
H1_mix_00036875	chr17	-	3617	2	FSM	ENSG00000185924.7	ENST00000331238.7	3614	2	0	-3	0	3	multi-exon	FALSE	canonical	3	44	junction_1	0	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTCATTTCCTAACCC	3	True	NA	3	True	AATAAA	-20	NA	2025334	1934673	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1937809_2024852
H1_mix_00036876	chr17	-	982	1	FSM	ENSG00000287553.1	ENST00000670012.1	980	1	0	-2	0	2	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTATTGTTGCGTGTTTTC	-4	True	NA	-3	True	AGTAAA	-28	NA	2041932	2040950	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_2041000_2041900
H1_mix_00036877	chr17	-	6320	19	NNC	ENSG00000070366.14	novel	5974	19	NA	NA	273	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_18	21.8409655871204	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACCTCTTGCTGATCTG	17	True	NA	-6	True	AATAAA	-20	NA	2303512	2059842	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_2061623_2065072_2065155_2065467_2065680_2068777_2068932_2081809_2081957_2085724_2085902_2172657_2172860_2186662_2186832_2188398_2188516_2236491_2236638_2244657_2244720_2282646_2282860_2283624_2283736_2292551_2292631_2292870_2292978_2297242_2297354_2297862_2298056_2298905_2300665_2303013
H1_mix_00036878	chr17	-	6121	19	FSM	ENSG00000070366.14	ENST00000263073.11	5974	19	-144	-3	-144	-1	multi-exon	TRUE	canonical	3	55	junction_18	16.0088709975839	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTCTTGCTGATCTGTTT	NA	False	NA	-3	True	AATAAA	-23	NA	2303929	2059839	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_2061623_2065072_2065155_2065467_2065680_2068777_2068932_2081809_2081957_2085724_2085902_2172657_2172860_2186662_2186832_2188398_2188516_2236491_2236638_2244657_2244720_2282646_2282860_2283624_2283736_2292551_2292631_2292870_2292978_2297242_2297354_2297862_2298056_2298905_2300665_2303632
H1_mix_00036879	chr17	-	6462	20	NNC	ENSG00000070366.14	novel	5974	19	NA	NA	-144	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_19	28.8230824705217	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTCTTGCTGATCTGTTT	NA	False	NA	-3	True	AATAAA	-23	NA	2303929	2059839	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_2061623_2065072_2065155_2065467_2065680_2068777_2068932_2081809_2081957_2085724_2085902_2172657_2172860_2186662_2186832_2188398_2188516_2236491_2236638_2244657_2244720_2282646_2282860_2283624_2283736_2292551_2292631_2292870_2292978_2297242_2297354_2297862_2298056_2298905_2300665_2303013_2303355_2303632
H1_mix_00036880	chr17	-	4245	15	FSM	ENSG00000167721.11	ENST00000301364.10	4245	15	0	0	0	0	multi-exon	FALSE	canonical	3	477	junction_7	72.4602635650628	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCCATTGCCTGGATCA	-8	True	NA	-21	True	AATAAA	-18	NA	2336457	2322395	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_2324375_2324503_2324579_2324688_2324830_2325303_2325421_2329342_2329476_2330514_2330626_2330946_2331110_2332168_2332360_2332960_2333125_2333556_2333717_2334471_2334897_2335259_2335395_2335510_2335731_2336036_2336141_2336330
H1_mix_00036882	chr17	-	4993	6	FSM	ENSG00000070444.15	ENST00000174618.5	4925	6	-56	-12	-12	12	multi-exon	FALSE	canonical	3	17	junction_4	3.12409987036266	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGCAGCATCTGGGTCA	7228	False	NA	0	True	AATAAA	-30	NA	2401116	2384060	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_2387650_2387856_2388050_2394042_2394155_2394304_2394347_2394874_2395455_2400639
H1_mix_00036883	chr17	-	606	2	FSM	ENSG00000070444.15	ENST00000575394.1	606	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCAGACGGGCCAGCCCGA	7240	False	NA	NA	False	NA	NA	NA	2401104	2387908	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_2388050_2400639
H1_mix_00036884	chr17	-	3021	1	Genic_Genomic	ENSG00000127804.13	novel	NA	NA	NA	NA	7470	203	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAGGAGTCAGGGCACTG	NA	False	NA	NA	False	NA	NA	NA	2408379	2405358	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr17_-_2405400_2408400
H1_mix_00036885	chr17	-	4359	11	NNC	ENSG00000127804.13	novel	5740	10	NA	NA	-3	420	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	48.6691894323298	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTAATCCCAGCTACTC	-5	True	NA	NA	False	AATACA	-27	NA	2511894	2415628	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_2417197_2419003_2420597_2420730_2420905_2438108_2438199_2441489_2441560_2464207_2464351_2467760_2467877_2473523_2473665_2477685_2477886_2502203_2502332_2511758
H1_mix_00036886	chr17	-	5740	10	FSM	ENSG00000127804.13	ENST00000263092.11	5740	10	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	18.5758372192228	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGCCATGGTCTCTTTA	1	True	NA	-5	True	AATAAA	-33	NA	2511888	2416048	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_2420597_2420730_2420905_2438108_2438199_2441489_2441560_2464207_2464351_2467760_2467877_2473523_2473665_2477685_2477886_2502203_2502332_2511758
H1_mix_00036888	chr17	-	5615	9	FSM	ENSG00000127804.13	ENST00000571669.6	5606	9	0	-9	0	0	multi-exon	FALSE	canonical	2	6	junction_8	51.5156226304215	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGCCATGGTCTCTTTA	-2	True	NA	-5	True	AATAAA	-33	NA	2511891	2416048	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_2420597_2420730_2420905_2438108_2438199_2441489_2441560_2464207_2464351_2467760_2467877_2473523_2473665_2477685_2477886_2511758
H1_mix_00036890	chr17	-	5227	26	FSM	ENSG00000132361.18	ENST00000435359.5	5224	26	0	-3	0	3	multi-exon	TRUE	canonical	3	110	junction_15	34.6363970412628	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTCACCTGTGTGTTCTG	130	False	NA	-4	True	AATAAA	-26	NA	2711633	2689382	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_2690778_2691608_2691683_2691760_2691896_2692003_2692098_2692360_2692483_2692570_2692697_2692779_2692861_2693899_2694040_2694122_2694277_2694479_2694565_2694856_2695102_2695217_2695281_2695373_2695527_2696158_2696260_2696433_2696536_2696718_2696943_2697895_2698591_2700381_2700475_2700677_2700826_2701139_2701266_2701365_2701521_2701612_2701738_2701913_2702058_2703317_2703490_2704361_2704565_2711561
H1_mix_00036891	chr17	-	5361	26	FSM	ENSG00000132361.18	ENST00000651024.2	5357	26	0	-4	0	3	multi-exon	FALSE	canonical	3	137	junction_15	30.9253552930278	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTCACCTGTGTGTTCTG	-1	True	NA	-4	True	AATAAA	-26	NA	2711764	2689382	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_2690778_2691608_2691683_2691760_2691896_2692003_2692098_2692360_2692483_2692570_2692697_2692779_2692861_2693899_2694040_2694122_2694277_2694479_2694565_2694856_2695102_2695217_2695281_2695373_2695527_2696158_2696260_2696433_2696539_2696718_2696943_2697895_2698591_2700381_2700475_2700677_2700826_2701139_2701266_2701365_2701521_2701612_2701738_2701913_2702058_2703317_2703490_2704361_2704565_2711561
H1_mix_00036892	chr17	-	555	5	FSM	ENSG00000132361.18	ENST00000572014.1	555	5	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_4	13.4976849866931	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGGGGCGGGGAAGAGACC	9280	False	NA	NA	False	NA	NA	NA	2694154	2692306	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_2692483_2692570_2692697_2692779_2692861_2693899_2694040_2694122
H1_mix_00036895	chr17	-	3536	1	ISM	ENSG00000277200.2	ENST00000614400.2	4643	4	25313	3	25313	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGTGAGTCCAATCTCTT	NA	False	NA	-12	True	AATAAA	-12	NA	2724339	2720803	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_2720800_2724300
H1_mix_00036896	chr17	-	4495	4	FSM	ENSG00000277200.2	ENST00000614400.2	4643	4	148	0	148	0	multi-exon	FALSE	canonical	3	10	junction_1	15.1070255914995	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGAGTCCAATCTCTTGCA	153	False	NA	-9	True	AATAAA	-15	NA	2749504	2720800	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_2725001_2730445_2730494_2735015_2735169_2749410
H1_mix_00036897	chr17	-	750	4	NNC	ENSG00000277200.2	novel	4643	4	NA	NA	11	-6384	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	8.52447456836295	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGCCAGGCACGGTGACT	16	True	NA	-11	True	AATAAA	-25	NA	2749641	2727184	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_2727503_2730445_2730494_2735015_2735169_2749410
H1_mix_00036898	chr17	-	942	1	FSM	ENSG00000183024.4	ENST00000328890.3	942	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAGTGACTTGACATCCA	NA	False	NA	NA	False	NA	NA	NA	3127551	3126609	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_3126600_3127600
H1_mix_00036900	chr17	-	3788	7	FSM	ENSG00000197417.9	ENST00000225519.5	3788	7	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_2	13.208793367383	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTGCCTTTTTTTT	2	True	NA	NA	False	AAAAAG	-13	NA	3636250	3608239	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_3610973_3615336_3615538_3621236_3621413_3623338_3623492_3624047_3624232_3630204_3630347_3636051
H1_mix_00036901	chr17	-	1280	4	FSM	ENSG00000213977.8	ENST00000225525.4	1280	4	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_3	6.0184900284226	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGGGCTTTGCTGAGGCA	0	True	NA	-6	True	AATAAA	-15	NA	3668578	3662894	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_3663886_3664194_3664273_3664678_3664799_3668487
H1_mix_00036902	chr17	-	772	5	NNC	ENSG00000213977.8	novel	1280	4	NA	NA	-44	-456	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	158.712594018244	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCCCTGCCCCCCAGC	-14	True	NA	NA	False	NA	NA	NA	3668622	3663351	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_3663563_3663657_3663886_3664194_3664273_3664678_3664799_3668487
H1_mix_00036904	chr17	-	1998	12	FSM	ENSG00000083454.22	ENST00000547178.5	1998	12	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	18.2869686700802	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTCCTGATTTTTTTCTC	313	False	NA	-4	True	AATAAA	-17	NA	3696096	3673226	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_3673878_3679589_3679785_3681895_3681979_3688011_3688106_3688625_3688760_3689491_3689628_3690069_3690151_3690426_3690524_3690604_3690681_3690955_3691028_3691643_3691795_3695868
H1_mix_00036906	chr17	-	2260	12	FSM	ENSG00000083454.22	ENST00000225328.10	2060	12	-200	0	-115	0	multi-exon	FALSE	canonical	3	34	junction_6	13.7462241246806	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTCCTGATTTTTTTCTC	54	False	NA	-4	True	AATAAA	-17	NA	3696355	3673226	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_3673878_3679589_3679785_3681895_3681979_3688011_3688106_3688625_3688760_3689491_3689631_3690069_3690151_3690426_3690524_3690604_3690681_3690955_3691028_3691643_3691795_3695868
H1_mix_00036909	chr17	-	685	4	FSM	ENSG00000083457.12	ENST00000572179.5	672	4	0	-13	0	13	multi-exon	FALSE	canonical	3	565	junction_3	11.6141675934562	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGGAAATACAGTATTACT	-34	True	NA	2	True	AATAAA	-32	NA	3723837	3714614	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_3714943_3716687_3716799_3720306_3720403_3723687
H1_mix_00036910	chr17	-	743	5	FSM	ENSG00000083457.12	ENST00000570360.1	721	5	17	-39	0	0	multi-exon	FALSE	canonical	3	59	junction_3	262.530950556311	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAATTTACACTTTTCT	-34	True	NA	-36	True	AGTAAA	-21	NA	3723837	3714652	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_3714943_3716687_3716799_3720306_3720403_3723287_3723384_3723687
H1_mix_00036911	chr17	-	12770	13	FSM	ENSG00000074356.17	ENST00000389005.6	12772	13	0	2	0	-2	multi-exon	FALSE	canonical	3	157	junction_6	33.2802702646611	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTTGTTCTAGTGGCA	-7	True	NA	-4	True	AATAAA	-18	NA	3846246	3802159	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_3813280_3814321_3814484_3816115_3816271_3818262_3818573_3821248_3821353_3821952_3822053_3824941_3825051_3825766_3825844_3826086_3826216_3829242_3829369_3840099_3840206_3843085_3843152_3846040
H1_mix_00036913	chr17	-	3619	16	FSM	ENSG00000004660.15	ENST00000348335.7	3572	16	-50	3	-50	-3	multi-exon	FALSE	canonical	3	21	junction_9	10.358034991681	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTTTGTGCGTACATTT	-31	True	NA	NA	False	AATAAA	-30	NA	3893103	3860317	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_3862284_3865907_3866012_3869486_3869616_3869800_3869889_3872553_3872628_3873408_3873463_3876222_3876423_3880345_3880435_3881626_3881649_3882527_3882565_3883041_3883176_3883428_3883481_3883883_3883938_3884379_3884428_3885327_3885731_3892938
H1_mix_00036914	chr17	-	3510	15	NIC	ENSG00000004660.15	novel	3572	16	NA	NA	26	-5	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	13.710564971464	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGTTTGTGCGTACAT	54	False	NA	NA	False	AATAAA	-28	NA	3893018	3860319	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_3862284_3865907_3866012_3869486_3869616_3869800_3869889_3872553_3872628_3873408_3873463_3876222_3876423_3880345_3880435_3882527_3882565_3883041_3883176_3883428_3883481_3883883_3883938_3884379_3884428_3885327_3885731_3892938
H1_mix_00036916	chr17	-	4710	22	NNC	ENSG00000074370.18	novel	4826	22	NA	NA	0	52542	intron_retention	FALSE	non_canonical	0	0	junction_1	30.9905259460484	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAACAAACAAAAAAAGAAA	789	False	NA	NA	False	AAAACA	-19	NA	3964415	3871327	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_3871358_3923865_3925442_3928662_3928781_3929327_3929446_3930300_3930435_3935191_3935278_3936266_3936470_3937415_3937637_3940970_3941307_3941435_3941655_3942605_3942732_3943390_3943523_3944703_3944807_3945059_3945149_3947390_3947856_3950510_3950597_3950692_3950774_3951250_3951390_3951580_3951686_3953346_3953430_3953692_3953711_3964173
H1_mix_00036917	chr17	-	4750	21	FSM	ENSG00000074370.18	ENST00000397041.8	4695	21	-55	0	-28	0	multi-exon	FALSE	canonical	3	93	junction_16	17.2605764677777	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGAGGATCCTCAGCGTCTG	712	False	NA	-6	True	AATAAA	-20	NA	3964492	3923872	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_3925442_3928662_3928781_3929327_3929446_3930300_3930435_3935191_3935278_3936266_3936470_3937415_3937637_3940970_3941307_3941435_3941655_3942605_3942732_3943390_3943523_3944703_3944807_3945059_3945149_3947390_3947856_3950510_3950597_3950692_3950774_3951250_3951390_3951580_3951686_3953346_3953430_3953692_3953711_3964173
H1_mix_00036918	chr17	-	8985	41	NIC	ENSG00000074755.15	novel	11466	55	NA	NA	-11468	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_39	6.65939186412693	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGTGTGTGGACTGGTC	NA	False	NA	-13	True	AATATA	-27	NA	4086648	4004444	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_4006971_4008882_4008955_4009603_4009758_4013448_4013615_4014089_4014189_4014346_4014516_4016322_4016467_4017370_4017731_4017835_4017972_4019668_4019770_4021128_4021321_4022708_4022829_4024918_4025119_4032125_4032259_4032827_4033003_4034014_4034293_4042428_4042569_4044223_4044375_4049707_4049860_4050780_4051044_4051970_4052137_4054056_4054196_4056215_4056346_4057993_4058156_4059170_4059291_4062752_4062918_4064360_4064830_4066446_4066541_4067162_4067243_4070683_4070925_4072607_4072757_4074149_4074352_4075096_4075179_4075262_4075430_4076636_4076760_4076867_4076990_4077882_4078043_4081375_4081491_4082436_4082508_4085669_4085804_4086485
H1_mix_00036920	chr17	-	2668	15	FSM	ENSG00000074755.15	ENST00000573183.1	2667	15	0	-1	0	0	multi-exon	FALSE	canonical	3	9	junction_14	5.57874976850475	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCCCTTTAAAGTTGCT	NA	False	NA	NA	False	AATAAA	-18	NA	4062798	4022415	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4022829_4024918_4025119_4032125_4032259_4032827_4033003_4034014_4034293_4042428_4042569_4044223_4044375_4049707_4049860_4050780_4051044_4051970_4052137_4054056_4054196_4056215_4056346_4057993_4058156_4059170_4059291_4062752
H1_mix_00036922	chr17	-	7511	25	FSM	ENSG00000185722.18	ENST00000341657.9	7506	25	0	-5	0	5	multi-exon	FALSE	canonical	2	74	junction_21	21.2622513702885	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGTGAATAAGTTTCTTGA	-12	True	NA	1	True	ATTAAA	-22	NA	4263979	4163815	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4167912_4169197_4169289_4170714_4170862_4172555_4172681_4173353_4173445_4173908_4174057_4177125_4177303_4178856_4179058_4179720_4179878_4181253_4181373_4182180_4182350_4183397_4183552_4183811_4183911_4184817_4185047_4189381_4189480_4194977_4195178_4195402_4195472_4197372_4197578_4206320_4206487_4207932_4208083_4209823_4209948_4216982_4217119_4235771_4235891_4242255_4242449_4263931
H1_mix_00036923	chr17	-	7495	25	FSM	ENSG00000185722.18	ENST00000574367.5	5033	25	-9	-2453	0	0	multi-exon	FALSE	canonical	2	20	junction_11	29.5855632962355	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTGACGTGAATAAGTTT	2	True	NA	-4	True	ATTAAA	-17	NA	4263965	4163820	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4167912_4169197_4169289_4170714_4170862_4172555_4172681_4173353_4173445_4173908_4174057_4177125_4177303_4178856_4179058_4179720_4179878_4181253_4181373_4182180_4182353_4183397_4183552_4183811_4183911_4184817_4185047_4189381_4189480_4194977_4195178_4195402_4195472_4197372_4197578_4206320_4206487_4207932_4208083_4209823_4209948_4216982_4217119_4235771_4235891_4242255_4242449_4263931
H1_mix_00036924	chr17	-	205	1	FSM	ENSG00000185722.18	ENST00000572564.1	2555	1	-166	2516	-166	628	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGCCATCTCGGCTCACT	6507	False	NA	NA	False	NA	NA	NA	4180602	4180397	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4180400_4180600
H1_mix_00036926	chr17	-	4207	6	FSM	ENSG00000132388.13	ENST00000396981.7	4167	6	0	-40	0	40	multi-exon	FALSE	canonical	3	1134	junction_3	87.1862374460557	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGTGGGACTCTTTCTG	-19	True	NA	0	True	NA	NA	NA	4366675	4269218	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4272517_4282797_4282922_4289229_4289409_4296716_4296815_4307020_4307124_4366270
H1_mix_00036927	chr17	-	1514	7	FSM	ENSG00000132388.13	ENST00000572484.5	1514	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	574.843746885476	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGCCAGAATGTTCTCA	28	True	NA	NA	False	NA	NA	NA	4366628	4271979	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4272517_4282797_4282922_4289229_4289409_4296716_4296815_4307020_4307124_4331773_4331889_4366270
H1_mix_00036928	chr17	-	984	5	FSM	ENSG00000132388.13	ENST00000571980.1	984	5	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_3	539.731877880119	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACATAGCACAACATGATC	28	True	NA	-123	True	AATGAA	-35	NA	4366628	4272296	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4272517_4282797_4282922_4289229_4289409_4307020_4307124_4366270
H1_mix_00036929	chr17	-	1996	7	FSM	ENSG00000132382.15	ENST00000571368.5	1995	7	0	-1	0	1	multi-exon	FALSE	canonical	3	741	junction_1	34.9304865252245	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGACCTGGTTCTTGTACA	2267	False	NA	-5	True	AATAAA	-39	NA	4543299	4538900	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4539968_4540347_4540485_4541462_4541565_4541783_4541892_4542463_4542533_4542615_4542742_4542912
H1_mix_00036930	chr17	-	4104	27	FSM	ENSG00000132382.15	ENST00000381556.6	4104	27	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	151.494863896379	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGGTTCTTGTACAACAA	-17	True	NA	-1	True	AATAAA	-43	NA	4555386	4538896	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4538976_4539438_4539968_4540347_4540485_4541462_4541565_4541783_4541892_4542463_4542533_4542615_4542742_4542912_4543166_4544488_4544647_4544750_4544922_4545025_4545176_4545258_4545346_4545609_4545762_4545845_4545943_4547957_4548058_4548142_4548311_4548523_4548650_4549331_4549443_4550057_4550354_4551879_4551998_4552124_4552293_4552450_4552627_4553809_4553918_4554018_4554094_4554194_4554279_4554860_4554957_4555126
H1_mix_00036931	chr17	-	4565	26	FSM	ENSG00000132382.15	ENST00000254718.9	4558	26	0	-7	0	0	multi-exon	TRUE	canonical	3	591	junction_16	71.3693043261597	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGGTTCTTGTACAACAA	-15	True	NA	-1	True	AATAAA	-43	NA	4555384	4538896	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4539968_4540347_4540485_4541462_4541565_4541783_4541892_4542463_4542533_4542615_4542742_4542912_4543166_4544488_4544647_4544750_4544922_4545025_4545176_4545258_4545346_4545609_4545762_4545845_4545943_4547957_4548058_4548142_4548311_4548523_4548650_4549331_4549443_4550057_4550354_4551879_4551998_4552124_4552293_4552450_4552627_4553809_4553918_4554018_4554094_4554194_4554279_4554860_4554957_4555126
H1_mix_00036932	chr17	-	1946	4	FSM	ENSG00000132382.15	ENST00000574934.5	1941	4	0	-5	0	1	multi-exon	FALSE	canonical	3	741	junction_1	43.3666538560063	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGACCTGGTTCTTGTACA	3143	False	NA	-5	True	AATAAA	-39	NA	4542423	4538900	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4539968_4540347_4540485_4541462_4541565_4541783
H1_mix_00036937	chr17	-	2680	14	FSM	ENSG00000161905.13	ENST00000293761.8	2697	14	17	0	17	0	multi-exon	FALSE	canonical	2	3	junction_13	3.19578124274477	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAGAGCATCAAAAAATTT	770	False	NA	NA	False	AATAAA	-16	NA	4641661	4630918	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4631780_4631888_4632057_4632180_4632282_4632860_4632983_4633145_4633316_4633413_4633501_4635758_4635969_4637114_4637259_4638216_4638378_4638580_4638685_4638849_4638973_4639050_4639133_4639429_4639632_4641516
H1_mix_00036938	chr17	-	5221	17	FSM	ENSG00000141456.16	ENST00000572293.7	5084	17	-200	63	0	-63	multi-exon	FALSE	canonical	3	788	junction_9	56.5461302278945	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAGAAAAATAACAGTAATC	8283	False	NA	NA	False	NA	NA	NA	4704337	4669836	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4671532_4671690_4673146_4673249_4673457_4673618_4673675_4674509_4674670_4674808_4674957_4675078_4675196_4675273_4675363_4675796_4675885_4676035_4676163_4676356_4676508_4676752_4676813_4682501_4682574_4682802_4682953_4690887_4690994_4691377_4691443_4703862
H1_mix_00036939	chr17	-	3878	16	FSM	ENSG00000141456.16	ENST00000573523.5	3878	16	0	0	0	0	multi-exon	FALSE	canonical	3	788	junction_8	58.3763270132299	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGACTGCTGCTTCTGCCTT	18	True	NA	-6	True	AATAAA	-17	NA	4704111	4671387	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4671532_4671690_4673146_4673249_4673457_4673618_4673675_4674509_4674670_4674808_4674957_4675078_4675196_4675273_4675885_4676035_4676163_4676356_4676508_4676752_4676813_4682501_4682574_4682802_4682953_4690887_4690994_4691377_4691443_4703862
H1_mix_00036945	chr17	-	402	1	FSM	ENSG00000213939.4	ENST00000466297.1	402	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATAAATCTTTGGCGCG	7403	False	NA	NA	False	AAGAAA	-4	NA	4705217	4704815	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4704800_4705200
H1_mix_00036946	chr17	-	2324	6	FSM	ENSG00000161921.17	ENST00000293778.12	2324	6	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_4	5.84465567848098	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGAAGTATGTATTTTCA	-22	True	NA	NA	False	ATTAAA	-29	NA	4739928	4733532	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4734480_4734582_4734653_4735091_4735509_4738407_4738491_4738781_4738921_4739260
H1_mix_00036947	chr17	-	1668	5	FSM	ENSG00000161921.17	ENST00000574412.6	1668	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	5.85234995535981	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGCTTTTCACACTGG	-16	True	NA	NA	False	TTTAAA	-16	NA	4739922	4734285	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4734653_4735091_4735509_4738407_4738491_4738781_4738921_4739260
H1_mix_00036948	chr17	-	1552	9	NNC	ENSG00000108528.14	novel	1692	8	NA	NA	-30	11898	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	360.351369325829	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGAAGATGCCGGGCGTGG	0	True	NA	NA	False	AAAAAG	-8	NA	4939943	4925231	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_4925270_4937204_4937897_4938022_4938075_4938153_4938254_4938338_4938430_4938511_4938603_4938768_4938976_4939059_4939213_4939815
H1_mix_00036949	chr17	-	1640	9	NNC	ENSG00000108528.14	novel	1692	8	NA	NA	0	11898	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	360.351369325829	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGAAGATGCCGGGCGTGG	27	True	NA	NA	False	AAAAAG	-8	NA	4940030	4925231	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_4925271_4937204_4937897_4938022_4938075_4938153_4938254_4938338_4938430_4938511_4938603_4938768_4938976_4939059_4939213_4939815
H1_mix_00036950	chr17	-	1535	9	NNC	ENSG00000108528.14	novel	1692	8	NA	NA	0	11898	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	360.351369325829	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGAAGATGCCGGGCGTGG	27	True	NA	NA	False	AAAAAG	-8	NA	4940030	4925231	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_4925271_4937309_4937897_4938022_4938075_4938153_4938254_4938338_4938430_4938511_4938603_4938768_4938976_4939059_4939213_4939815
H1_mix_00036951	chr17	-	1692	8	FSM	ENSG00000108528.14	ENST00000225665.12	1692	8	0	0	0	0	multi-exon	FALSE	canonical	3	1028	junction_5	57.0835406421579	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCAGGCCCGGTGTGTTTC	11	True	NA	-4	True	TATAAA	-43	NA	4940046	4937129	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4937897_4938022_4938075_4938153_4938254_4938338_4938430_4938511_4938603_4938768_4938976_4939059_4939213_4939815
H1_mix_00036952	chr17	-	807	3	FSM	ENSG00000108518.8	ENST00000225655.6	807	3	0	0	0	0	multi-exon	FALSE	canonical	3	28033	junction_2	437	2227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTGTGTGATTTGAGCT	0	True	NA	-16	True	AATAAA	-18	NA	4948530	4945651	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4945998_4946627_4946821_4948262
H1_mix_00036953	chr17	-	1094	6	FSM	ENSG00000091640.8	ENST00000575142.5	1094	6	0	0	0	0	multi-exon	FALSE	canonical	3	914	junction_4	32.6042941957037	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGGTTTGTTTATACA	4976	False	NA	-2	True	AATAAA	-16	NA	4967790	4959225	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4959917_4960021_4960112_4960233_4960319_4960458_4960548_4960785_4960854_4967719
H1_mix_00036954	chr17	-	1005	7	FSM	ENSG00000091640.8	ENST00000206020.8	1005	7	0	0	0	0	multi-exon	FALSE	canonical	3	868	junction_1	42.5519290592879	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGGTTTGTTTATACA	2	True	NA	-2	True	AATAAA	-16	NA	4967817	4959225	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4959644_4959759_4959917_4960021_4960112_4960233_4960319_4960458_4960548_4960785_4960854_4967719
H1_mix_00036955	chr17	-	495	3	FSM	ENSG00000091640.8	ENST00000573805.1	495	3	0	0	0	0	multi-exon	FALSE	canonical	3	914	junction_1	31.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCCCCTCCCCGACCAAG	4981	False	NA	NA	False	NA	NA	NA	4967785	4960186	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4960548_4960785_4960854_4967719
H1_mix_00036956	chr17	-	431	2	FSM	ENSG00000091640.8	ENST00000570341.1	431	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGGCCGCGGCGGACGGA	6017	False	NA	NA	False	NA	NA	NA	4966749	4966237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4966320_4966400
H1_mix_00036957	chr17	-	4431	21	FSM	ENSG00000108509.21	ENST00000574951.5	4431	21	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_17	19.3212318447867	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGCCTCTGTCTGCGG	7	True	NA	0	True	ATTAAA	-19	NA	4986234	4967991	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4968820_4968906_4968982_4969149_4969338_4969629_4969702_4969901_4970086_4970339_4970537_4972231_4972537_4972768_4972992_4973174_4973254_4973584_4973770_4974384_4974501_4977057_4977193_4978503_4978631_4979683_4980622_4981224_4981360_4981677_4981832_4982088_4982228_4982756_4982893_4982975_4983044_4985879_4985984_4986191
H1_mix_00036958	chr17	-	4782	22	FSM	ENSG00000108509.21	ENST00000361571.9	4777	22	0	-5	0	0	multi-exon	FALSE	canonical	1	1	junction_4	26.5284684289955	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGCCTCTGTCTGCGG	287	False	NA	0	True	ATTAAA	-19	NA	4987370	4967991	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4968820_4968906_4968982_4969149_4969338_4969499_4969521_4969629_4969702_4969901_4970086_4970339_4970537_4972231_4972537_4972768_4972992_4973174_4973254_4973584_4973770_4974384_4974501_4977057_4977193_4978503_4978631_4979683_4980622_4981224_4981360_4981677_4981832_4982756_4982893_4982975_4983044_4985879_4985984_4986191_4986287_4986953
H1_mix_00036960	chr17	-	4497	23	FSM	ENSG00000108509.21	ENST00000348066.8	4515	23	23	-5	-2	0	multi-exon	FALSE	canonical	1	1	junction_4	22.4748252183424	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGCCTCTGTCTGCGG	5	True	NA	0	True	ATTAAA	-19	NA	4987652	4967991	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4968820_4968906_4968982_4969149_4969338_4969499_4969521_4969629_4969702_4969901_4970086_4970339_4970537_4972231_4972537_4972768_4972992_4973174_4973254_4973584_4973770_4974384_4974501_4977057_4977193_4978503_4978631_4979683_4980622_4981224_4981360_4981677_4981832_4982088_4982161_4982756_4982893_4982975_4983044_4985879_4985984_4986191_4986287_4987592
H1_mix_00036962	chr17	-	1610	4	FSM	ENSG00000167840.13	ENST00000575898.5	1610	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	47.1616605117146	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGTTGTTGTTGTTT	22	True	NA	72	True	NA	NA	NA	5111841	5105540	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_5106507_5108925_5109053_5109393_5109869_5111799
H1_mix_00036963	chr17	-	2101	3	FSM	ENSG00000167840.13	ENST00000574735.1	1907	3	0	-194	0	0	multi-exon	FALSE	canonical	3	36	junction_2	67	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGTTGTTGTTGTTT	NA	False	NA	72	True	NA	NA	NA	5112064	5105540	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_5106534_5108925_5109769_5111799
H1_mix_00036964	chr17	-	1628	4	ISM	ENSG00000167840.13	ENST00000250076.7	2179	5	11038	138	0	0	3prime_fragment	FALSE	canonical	3	85	junction_3	34.7978287956144	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGGACTGGATCCCATAAA	NA	False	NA	-43	True	NA	NA	NA	5112064	5105772	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_5106534_5108925_5109053_5109393_5109869_5111799
H1_mix_00036965	chr17	-	1824	5	FSM	ENSG00000167840.13	ENST00000573015.5	1553	5	-271	0	-52	0	multi-exon	FALSE	canonical	3	127	junction_3	16.9558249578132	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGGACTGGATCCCATAAA	NA	False	NA	-43	True	NA	NA	NA	5112116	5105772	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_5106534_5108925_5109053_5109393_5109869_5111075_5111220_5111799
H1_mix_00036967	chr17	-	4862	1	FSM	ENSG00000180626.10	ENST00000399604.4	4862	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAGTGACTGTTTAGTAT	7455	False	NA	-4	True	AATAAA	-16	NA	5184397	5179535	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_5179500_5184400
H1_mix_00036968	chr17	-	6040	2	FSM	ENSG00000180626.10	ENST00000575779.2	4863	2	6	-1183	0	1183	multi-exon	FALSE	canonical	3	19	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTACATATACTGTAAATAA	-10	True	NA	NA	False	AATAAA	-9	NA	5191862	5178351	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_5184277_5191747
H1_mix_00036969	chr17	-	750	2	FSM	ENSG00000180626.10	ENST00000576772.1	757	2	7	0	7	0	multi-exon	FALSE	canonical	3	15	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAGTGGCCAAAACTTCAA	-3	True	NA	NA	False	NA	NA	NA	5191855	5183950	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_5184277_5191431
H1_mix_00036970	chr17	-	3611	17	FSM	ENSG00000108559.12	ENST00000573584.6	3611	17	0	0	0	0	multi-exon	TRUE	canonical	3	418	junction_6	49.7540434914591	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTATATGTTTCCTTTAT	0	True	NA	-85	True	AATAAA	-17	NA	5419662	5384832	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_5386270_5386707_5386827_5386983_5387111_5387385_5387467_5387604_5387671_5387778_5387905_5388801_5388961_5391560_5391663_5394890_5394982_5399551_5399651_5404098_5404247_5405056_5405244_5408732_5408910_5410702_5410790_5414008_5414135_5416512_5416683_5419353
H1_mix_00036971	chr17	-	2194	17	FSM	ENSG00000108559.12	ENST00000225696.8	2194	17	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_6	122.877463734201	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGGTGTGGTTCATCT	196	False	NA	-25	True	TATAAA	-15	NA	5419466	5386101	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_5386270_5386707_5386827_5386983_5387111_5387385_5387467_5387604_5387671_5387778_5387953_5388801_5388961_5391560_5391663_5394890_5394982_5399551_5399651_5404098_5404247_5405056_5405244_5408732_5408910_5410702_5410790_5414008_5414135_5416512_5416683_5419353
H1_mix_00036972	chr17	-	2081	11	FSM	ENSG00000108559.12	ENST00000574867.5	2081	11	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_7	45.5126356081473	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCAGAGGTTGCAGTGAGC	0	True	NA	NA	False	NA	NA	NA	5419662	5388375	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_5388961_5391560_5391663_5394890_5394982_5399551_5399651_5404098_5404247_5405056_5405244_5408732_5408910_5410702_5410790_5414008_5414135_5416512_5416683_5419353
H1_mix_00036974	chr17	-	1169	6	FSM	ENSG00000108561.8	ENST00000225698.8	1169	6	0	0	0	0	multi-exon	FALSE	canonical	3	5817	junction_4	306.41775405482	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTTTGTCTTTTTCTAT	-34	True	NA	-4	True	CATAAA	-20	NA	5439155	5432776	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_5433165_5433292_5433416_5433668_5433768_5434872_5434967_5438122_5438274_5438841
H1_mix_00036975	chr17	-	911	2	FSM	ENSG00000108561.8	ENST00000573204.1	911	2	0	0	0	0	multi-exon	FALSE	canonical	3	6726	junction_1	0	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCAGGAGTACATTACTTT	5011	False	NA	NA	False	NA	NA	NA	5434110	5433071	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_5433165_5433292
H1_mix_00036978	chr17	-	5528	12	FSM	ENSG00000005100.13	ENST00000225296.8	5535	12	12	-5	12	5	multi-exon	FALSE	canonical	2	5	junction_11	3.24737656354395	223	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGGCTTGTTTCTTG	23	True	NA	-2	True	ATTAAA	-19	NA	5468970	5440911	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_5444514_5448808_5448896_5450202_5450407_5450806_5450935_5453579_5453669_5453820_5453981_5455159_5455272_5455996_5456183_5460938_5461110_5462318_5462547_5463528_5463690_5468570
H1_mix_00036979	chr17	-	4167	7	FSM	ENSG00000072849.11	ENST00000158771.9	4167	7	0	0	0	0	multi-exon	FALSE	canonical	3	848	junction_2	52.2390339369582	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTATCTGGTATTTTTAA	-3	True	NA	-2	True	AATAAA	-25	NA	5486178	5471253	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_5474790_5480053_5480145_5480386_5480583_5481295_5481390_5482808_5482883_5485150_5485217_5486068
H1_mix_00036980	chr17	-	701	2	FSM	ENSG00000072849.11	ENST00000573547.1	701	2	0	0	0	0	multi-exon	FALSE	canonical	3	874	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTTCTCTCACTGTAT	6535	False	NA	-52	True	AATAAA	-9	NA	5480273	5474308	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_5474790_5480053
H1_mix_00036986	chr17	-	1500	2	FSM	ENSG00000286190.2	ENST00000568641.2	1500	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCAGTTCTCCATTAATT	-7	True	NA	-16	True	AATAAA	-23	NA	5501006	5499426	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_5499951_5500030
H1_mix_00036987	chr17	-	2184	6	FSM	ENSG00000129221.16	ENST00000381129.8	2894	6	0	710	0	86	multi-exon	FALSE	canonical	1	1	junction_2	0.489897948556636	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCGAGCAGCAGCTCAGG	4	True	NA	NA	False	NA	NA	NA	6435121	6424447	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_6425831_6426614_6426757_6426880_6427058_6428317_6428507_6433918_6434099_6435008
H1_mix_00036988	chr17	-	5155	19	FSM	ENSG00000198920.11	ENST00000361413.8	4647	19	-516	8	-516	-7	multi-exon	FALSE	canonical	3	22	junction_18	7.33501664182178	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACCTACTAGAGCATTGC	NA	False	NA	-24	True	AATAAA	-16	NA	6641227	6578154	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_6579865_6589778_6590004_6590509_6590631_6594971_6595054_6596157_6596344_6599236_6599321_6600379_6600459_6606872_6606963_6607180_6607271_6608347_6608465_6609993_6610161_6611918_6612149_6620787_6620999_6622881_6623098_6623508_6623572_6624754_6624862_6628116_6628742_6635010_6635172_6640636
H1_mix_00036990	chr17	-	1629	4	FSM	ENSG00000108590.11	ENST00000225728.8	1629	4	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_2	21.4009345590327	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGAAGGTGTGCTCTGCA	-17	True	NA	NA	False	AATAAA	-22	NA	6651605	6643310	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_6644660_6649981_6650079_6650355_6650434_6651500
H1_mix_00036991	chr17	-	4924	2	FSM	ENSG00000108590.11	ENST00000575519.1	620	2	0	-4304	0	-1290	multi-exon	FALSE	canonical	3	155	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTCCTGAATACTTTTG	13	True	NA	NA	False	NA	NA	NA	6651575	6645584	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_6650434_6651500
H1_mix_00036992	chr17	-	792	2	FSM	ENSG00000261996.1	ENST00000576138.1	879	2	0	87	0	-87	multi-exon	FALSE	canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTCAGATTACATGTTAA	2755	False	NA	NA	False	NA	NA	NA	6655009	6653550	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_6654224_6654890
H1_mix_00036993	chr17	-	5402	1	FSM	ENSG00000141485.17	ENST00000574580.2	5398	1	0	-4	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCACTGTGCTGCTGACT	3035	False	NA	-11	True	ATTAAA	-21	NA	6690120	6684718	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_6684700_6690100
H1_mix_00036994	chr17	-	1740	11	FSM	ENSG00000141485.17	ENST00000573648.5	1723	11	0	-17	0	0	multi-exon	FALSE	canonical	1	2	junction_9	4.88364617882991	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGCCAATGGGCCACCT	NA	False	NA	NA	False	NA	NA	NA	6713377	6686079	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_6686339_6690778_6690941_6693043_6693163_6694096_6694198_6695725_6695942_6701003_6701127_6702969_6703139_6703877_6704057_6706641_6706779_6707027_6707157_6713231
H1_mix_00036995	chr17	-	660	3	FSM	ENSG00000215067.11	ENST00000399541.6	665	3	0	5	0	-5	multi-exon	FALSE	canonical	0	0	junction_1	6.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAAGTTCTCTGGTTTCAC	6	True	NA	NA	False	CATAAA	-17	NA	7012334	6985113	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_6985541_7009795_7009890_7012195
H1_mix_00036996	chr17	-	1073	8	NNC	ENSG00000141505.12	novel	1310	9	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	10.1136400116731	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGTTAGTTGTCTGGT	7	True	NA	-5	True	AGTAAA	-17	NA	7178160	7173430	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_7173834_7173960_7174068_7174137_7174290_7174373_7174461_7176829_7176902_7176980_7177077_7177209_7177327_7178121
H1_mix_00036997	chr17	-	3043	2	FSM	ENSG00000279812.1_ENSG00000132535.22	ENST00000489885.1	1894	2	-1149	0	-936	0	multi-exon	FALSE	canonical	3	18	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGTGGCCTGGTTA	NA	False	NA	NA	False	NA	NA	NA	7193384	7189889	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7190815_7191266
H1_mix_00036998	chr17	-	3440	20	FSM	ENSG00000132535.22	ENST00000302955.11	3446	20	6	0	6	0	multi-exon	FALSE	canonical	2	2	junction_19	10.7376160711755	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGTGGCCTGGTTA	18	True	NA	NA	False	NA	NA	NA	7217603	7189889	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7190815_7191266_7191359_7191892_7192003_7192944_7193118_7193482_7193585_7193666_7193715_7193843_7193872_7193963_7194001_7194318_7194496_7196219_7196335_7196472_7196576_7196756_7197053_7202902_7203048_7203192_7203330_7203423_7203594_7203691_7203817_7204007_7204059_7204198_7204253_7208173_7208240_7217117
H1_mix_00036999	chr17	-	2989	15	FSM	ENSG00000004975.12	ENST00000005340.10	2989	15	0	0	0	0	multi-exon	FALSE	canonical	3	380	junction_11	52.6955057526789	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACGCCTCTGGCTCCTTT	-16	True	NA	-7	True	AATAAA	-18	NA	7234517	7225341	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7226314_7226420_7226640_7227089_7227270_7227403_7227536_7227654_7227784_7227976_7228045_7228968_7229046_7229134_7229275_7229377_7229448_7229587_7229679_7229807_7229944_7230045_7230156_7230284_7230431_7230727_7230798_7234068
H1_mix_00037001	chr17	-	2659	15	FSM	ENSG00000004975.12	ENST00000575458.5	2659	15	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_12	146.628104469805	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGACAGCAGCCTGAGGA	8683	False	NA	-64	True	NA	NA	NA	7234318	7225454	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7226314_7226420_7226640_7227089_7227270_7227403_7227536_7227654_7227784_7227976_7228045_7228968_7229046_7229134_7229275_7229377_7229448_7229587_7229679_7229807_7229944_7230045_7230138_7230284_7230431_7230727_7230798_7234068
H1_mix_00037007	chr17	-	1988	5	FSM	ENSG00000040633.13	ENST00000320316.8	1978	5	0	-10	0	1	multi-exon	FALSE	canonical	3	492	junction_4	89.0066710982946	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCACTGTCCTGCTCGG	-14	True	NA	-3	True	AATAAA	-27	NA	7239457	7235027	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7235841_7235929_7236768_7237384_7237478_7237628_7237661_7239245
H1_mix_00037008	chr17	-	592	4	FSM	ENSG00000040633.13	ENST00000570899.1	649	4	79	-22	79	0	multi-exon	FALSE	canonical	2	5	junction_3	270.395184046528	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGAGCTGGGGCTGGCTTT	3358	False	NA	-94	True	NA	NA	NA	7239643	7236358	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7236768_7237384_7237478_7237628_7237661_7239585
H1_mix_00037010	chr17	-	762	4	FSM	ENSG00000170296.10	ENST00000577035.5	762	4	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_3	1006.68796886953	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTTGCTCCCCTCGTC	1	True	NA	-10	True	AATAAA	-32	NA	7241819	7240407	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7240920_7241341_7241461_7241600_7241680_7241767
H1_mix_00037011	chr17	-	1167	4	FSM	ENSG00000170296.10	ENST00000302386.10	1319	4	0	152	0	-152	multi-exon	FALSE	canonical	3	1716	junction_3	310.935148651076	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCTCATGTAAAAAAAAATT	-58	True	NA	NA	False	ACTAAA	-10	NA	7242449	7240159	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7240920_7241341_7241461_7241600_7241680_7242240
H1_mix_00037013	chr17	-	1071	3	FSM	ENSG00000170296.10	ENST00000571253.1	837	3	433	-667	0	-179	multi-exon	FALSE	canonical	3	2287	junction_2	75.5	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACGCATGTGAAACTAAATG	1	True	NA	NA	False	NA	NA	NA	7241819	7240186	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7240920_7241341_7241461_7241600
H1_mix_00037014	chr17	-	1767	8	FSM	ENSG00000175826.12	ENST00000574322.6	1767	8	0	0	0	0	multi-exon	FALSE	canonical	3	548	junction_4	55.8964056381563	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGCCTTAGGTCCTTCTCT	-13	True	NA	-6	True	TTTAAA	-27	NA	7251734	7243590	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7244246_7244550_7244636_7246025_7246138_7246253_7246371_7246790_7246863_7247063_7247183_7247276_7247344_7251194
H1_mix_00037015	chr17	-	1724	9	FSM	ENSG00000175826.12	ENST00000573600.5	1724	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_8	201.96251972829	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATGCATTATAACTTTGA	9033	False	NA	17	True	NA	NA	NA	7252081	7243617	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7244246_7244550_7244636_7246025_7246138_7246253_7246371_7246790_7246863_7247063_7247183_7247276_7247344_7251194_7251602_7251964
H1_mix_00037016	chr17	-	876	8	FSM	ENSG00000175826.12	ENST00000575783.5	876	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_7	220.474719731801	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGTAAGGGAAGTGGGCT	9060	False	NA	NA	False	NA	NA	NA	7252054	7244554	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7244636_7246025_7246138_7246253_7246371_7246790_7246863_7247063_7247183_7247276_7247344_7251194_7251413_7251964
H1_mix_00037017	chr17	-	1542	4	FSM	ENSG00000181885.18	ENST00000360325.11	1542	4	0	0	0	0	multi-exon	FALSE	canonical	3	1440	junction_3	55.6496980125579	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGGGTGTTCTACTCTCTC	0	True	NA	-30	True	AATAAA	-24	NA	7262478	7259902	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7260537_7260641_7260727_7260820_7260986_7261820
H1_mix_00037018	chr17	-	1228	5	FSM	ENSG00000181885.18	ENST00000397317.8	1228	5	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_4	630.434919321574	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTTTTTCCCTTCAGGG	756	False	7263223	-52	True	AATAAA	-19	NA	7263213	7260136	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7260537_7260641_7260727_7260820_7260986_7261820_7262344_7263158
H1_mix_00037019	chr17	-	4553	6	FSM	ENSG00000006047.13	ENST00000571485.5	4553	6	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_5	15.3805071437843	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTGTGGTCTTGGTCTC	29	False	NA	-21	True	AGTAAA	-14	NA	7294589	7288262	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7288644_7288748_7288839_7289529_7289726_7289967_7290072_7290250_7290536_7291092
H1_mix_00037020	chr17	-	1654	9	FSM	ENSG00000006047.13	ENST00000007699.10	1654	9	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_6	19.6198241582334	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTGTGGTCTTGGTCTC	-21	True	NA	-21	True	AGTAAA	-14	NA	7294639	7288262	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7288644_7288748_7288839_7289529_7289726_7289967_7290072_7290250_7290536_7291092_7291183_7292025_7292060_7293474_7293539_7294229
H1_mix_00037021	chr17	-	606	3	FSM	ENSG00000006047.13	ENST00000570720.1	606	3	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_1	5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGAGGTGAGGACCTCAG	4055	False	NA	NA	False	NA	NA	NA	7290563	7289536	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7289726_7289967_7290072_7290250
H1_mix_00037022	chr17	-	869	3	FSM	ENSG00000132522.16	ENST00000573807.5	823	3	0	-46	0	46	multi-exon	FALSE	canonical	3	872	junction_2	16.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCAAGGTTGCTTGGAGG	1595	False	NA	40	True	NA	NA	NA	7313757	7312612	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7312840_7313028_7313125_7313211
H1_mix_00037023	chr17	-	1632	10	FSM	ENSG00000132522.16	ENST00000571569.5	1586	10	0	-46	0	46	multi-exon	FALSE	canonical	3	97	junction_9	274.196199017338	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCAAGGTTGCTTGGAGG	24	True	NA	40	True	NA	NA	NA	7315328	7312612	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7312840_7313028_7313125_7313211_7313292_7313379_7313470_7313567_7313722_7313905_7313989_7314079_7314160_7314290_7314404_7314487_7315120_7315251
H1_mix_00037024	chr17	-	1371	10	FSM	ENSG00000132522.16	ENST00000389167.9	1371	10	0	0	0	0	multi-exon	FALSE	canonical	3	778	junction_8	85.0071892384534	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCTGCTGCTGTTTGT	9	True	NA	-7	True	AATAAA	-17	NA	7315343	7312659	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7312840_7313028_7313125_7313211_7313292_7313379_7313470_7313567_7313722_7313905_7313989_7314079_7314160_7314290_7314404_7314487_7314598_7314958
H1_mix_00037025	chr17	-	1207	11	NIC	ENSG00000132522.16	novel	1176	11	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	97	junction_10	261.638701265696	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCTGCTGCTGTTTG	40	True	NA	-8	True	AATAAA	-16	NA	7315312	7312660	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_7312840_7313028_7313125_7313211_7313292_7313379_7313470_7313567_7313722_7313905_7313989_7314079_7314160_7314290_7314404_7314487_7314598_7314958_7315120_7315251
H1_mix_00037026	chr17	-	1177	11	FSM	ENSG00000132522.16	ENST00000380728.7	1176	11	0	-1	0	0	multi-exon	FALSE	canonical	3	380	junction_10	182.755574470384	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCTGCTGCTGTTTGT	-8	True	NA	-7	True	AATAAA	-17	NA	7315360	7312659	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7312840_7313028_7313125_7313211_7313292_7313379_7313470_7313567_7313722_7313905_7313989_7314079_7314160_7314290_7314404_7314487_7314598_7314958_7315120_7315330
H1_mix_00037027	chr17	-	1977	8	FSM	ENSG00000132522.16	ENST00000571697.5	1977	8	0	0	0	0	multi-exon	FALSE	canonical	3	380	junction_7	215.684766192114	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGTCCCAGGCCAATAAA	NA	False	NA	-43	True	NA	NA	NA	7315564	7312695	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7312840_7313028_7313292_7313379_7313470_7313567_7313989_7314079_7314160_7314290_7314404_7314487_7315120_7315330
H1_mix_00037032	chr17	-	5182	29	FSM	ENSG00000215041.10	ENST00000315614.11	5182	29	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_14	16.7439830801323	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTCGGCCTCTCTCTCGC	24	True	NA	-3	True	AATAAA	-18	NA	7329316	7315627	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7316328_7317204_7317371_7317460_7317574_7317787_7317933_7318064_7318173_7318268_7318357_7318494_7318675_7319049_7319209_7320758_7320924_7321111_7321274_7321360_7321460_7321559_7321788_7321864_7322011_7322734_7322867_7322953_7323124_7323484_7323564_7323646_7323724_7323813_7324013_7324107_7324271_7324394_7324481_7324798_7324981_7325208_7325474_7325640_7325714_7326254_7326344_7326436_7326549_7326710_7327010_7327164_7327231_7327439_7327885_7329030
H1_mix_00037033	chr17	-	5207	29	FSM	ENSG00000215041.10	ENST00000399464.7	5207	29	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_14	16.0469257657226	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTCGGCCTCTCTCTCGC	5	True	NA	-3	True	AATAAA	-18	NA	7329335	7315627	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7316328_7317204_7317371_7317460_7317574_7317787_7317933_7318064_7318173_7318268_7318357_7318494_7318675_7319049_7319209_7320758_7320924_7321111_7321274_7321360_7321460_7321559_7321788_7321864_7322011_7322734_7322867_7322947_7323124_7323484_7323564_7323646_7323724_7323813_7324013_7324107_7324271_7324394_7324481_7324798_7324981_7325208_7325474_7325640_7325714_7326254_7326344_7326436_7326549_7326710_7327010_7327164_7327231_7327439_7327885_7329030
H1_mix_00037034	chr17	-	819	3	FSM	ENSG00000215041.10	ENST00000572680.1	819	3	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGTGAGACACCACTACTA	NA	False	NA	NA	False	NA	NA	NA	7317908	7316122	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7316328_7317204_7317371_7317460
H1_mix_00037036	chr17	-	1627	8	FSM	ENSG00000187838.17	ENST00000324822.15	1689	8	62	0	0	0	multi-exon	FALSE	canonical	3	58	junction_7	73.1952937039545	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTATGTAATAGGGGAGG	9588	False	NA	-1	True	TATAAA	-26	NA	7394508	7389726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7390442_7390633_7390796_7392790_7392953_7393143_7393365_7393466_7393510_7393600_7393837_7394103_7394160_7394476
H1_mix_00037037	chr17	-	2313	5	FSM	ENSG00000187838.17	ENST00000571541.5	2310	5	0	-3	0	0	multi-exon	FALSE	canonical	3	148	junction_3	45.9510609235521	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTATGTAATAGGGGAGG	9588	False	NA	-1	True	TATAAA	-26	NA	7394508	7389726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7390442_7390633_7390796_7392790_7392953_7393143_7393510_7393600
H1_mix_00037038	chr17	-	2059	7	FSM	ENSG00000187838.17	ENST00000573774.5	2056	7	0	-3	0	0	multi-exon	FALSE	canonical	3	111	junction_6	59.1992867824905	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTATGTAATAGGGGAGG	9531	False	NA	-1	True	TATAAA	-26	NA	7394565	7389726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7390442_7390633_7390796_7392790_7392953_7393143_7393365_7393466_7393510_7393600_7394268_7394476
H1_mix_00037039	chr17	-	1752	8	FSM	ENSG00000187838.17	ENST00000619711.5	1752	8	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_7	60.0802184838007	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTATGTAATAGGGGAGG	8	True	NA	-1	True	TATAAA	-26	NA	7394525	7389726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7390442_7390633_7390796_7392790_7392953_7393143_7393365_7393466_7393510_7393600_7393837_7394103_7394268_7394476
H1_mix_00037040	chr17	-	1629	7	FSM	ENSG00000187838.17	ENST00000576362.5	1605	7	-3	-21	3	0	multi-exon	FALSE	canonical	3	20	junction_3	88.6104144869865	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAGATGTATGTAATAG	9825	False	NA	-7	True	TATAAA	-20	NA	7394271	7389732	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7390442_7390633_7390796_7392790_7392881_7393143_7393365_7393466_7393510_7393600_7393837_7394103
H1_mix_00037041	chr17	-	1674	6	FSM	ENSG00000187838.17	ENST00000575543.5	1672	6	0	-2	0	0	multi-exon	FALSE	canonical	3	47	junction_3	97.6987205648058	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAGATGTATGTAATAG	18	True	NA	-7	True	TATAAA	-20	NA	7394515	7389732	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7390442_7390633_7390796_7392790_7392953_7393466_7393510_7393600_7394160_7394476
H1_mix_00037042	chr17	-	1971	7	FSM	ENSG00000187838.17	ENST00000576201.5	1965	7	0	-6	0	0	multi-exon	FALSE	canonical	3	148	junction_3	50.3964835633951	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTATGTAATAGGGGAGG	-2	True	NA	-1	True	TATAAA	-26	NA	7394535	7389726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7390442_7390633_7390796_7392790_7392953_7393143_7393365_7393466_7393510_7393600_7393837_7394103
H1_mix_00037043	chr17	-	2038	8	FSM	ENSG00000187838.17	ENST00000574401.5	2032	8	0	-6	0	0	multi-exon	FALSE	canonical	3	33	junction_7	80.1299964216311	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTATGTAATAGGGGAGG	26	True	NA	-1	True	TATAAA	-26	NA	7394807	7389726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7390442_7390633_7390796_7392790_7392953_7393143_7393365_7393466_7393510_7393600_7393837_7394103_7394272_7394476
H1_mix_00037044	chr17	-	1533	7	NIC	ENSG00000187838.17	novel	1752	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_3	85.2010693725274	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGAAAGATGTATGTAAT	-2	True	NA	-9	True	TATAAA	-18	NA	7394535	7389734	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_7390442_7390633_7390796_7392790_7392953_7393466_7393510_7393600_7393837_7394103_7394268_7394476
H1_mix_00037047	chr17	-	479	2	FSM	ENSG00000205544.4	ENST00000575427.1	403	2	-73	-3	-73	0	multi-exon	FALSE	canonical	3	1126	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGAGTCTTTGTTCATC	543	False	NA	-23	True	AATAAA	-1	NA	7403553	7402974	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7403210_7403309
H1_mix_00037048	chr17	-	446	4	FSM	ENSG00000205544.4	ENST00000302422.4	446	4	0	0	0	0	multi-exon	FALSE	canonical	3	1033	junction_3	41.1204193666467	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGAGTCTTTGTTCATC	-1	True	NA	-23	True	AATAAA	-1	NA	7404097	7402974	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7403210_7403309_7403391_7403657_7403690_7403999
H1_mix_00037049	chr17	-	5873	4	FSM	ENSG00000174282.12	ENST00000380599.9	5860	4	0	-13	0	1	multi-exon	FALSE	canonical	3	42	junction_3	6.23609564462324	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGATGCCAGGTGCAATTA	-2	True	NA	-4	True	AATAAA	-31	NA	7479631	7459364	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7463891_7465710_7466811_7467256_7467328_7479455
H1_mix_00037050	chr17	-	5956	4	FSM	ENSG00000174282.12	ENST00000311403.4	5956	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	21.1397466609439	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGATGCCAGGTGCAATT	-22	True	NA	-5	True	AATAAA	-30	NA	7484263	7459365	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7463891_7465710_7466811_7467256_7467328_7484003
H1_mix_00037051	chr17	-	426	1	FSM	ENSG00000276384.1	ENST00000610459.1	426	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCCACAGGGAATTCT	3589	False	NA	-10	True	AATAAA	-16	NA	7558245	7557819	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7557800_7558200
H1_mix_00037052	chr17	-	348	2	FSM	ENSG00000233223.4	ENST00000415124.1	352	2	0	4	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCATTATCTCATATTTAT	6022	False	NA	-4	True	AATAAA	-24	NA	7584072	7581967	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7582161_7583917
H1_mix_00037053	chr17	-	733	2	FSM	ENSG00000233223.4	ENST00000655859.2	745	2	12	0	12	0	multi-exon	FALSE	canonical	3	19	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCATTATCTCATATTTAT	0	True	NA	-4	True	AATAAA	-24	NA	7584086	7581967	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7582532_7583917
H1_mix_00037054	chr17	-	668	2	FSM	ENSG00000233223.4	ENST00000689751.1	1424	2	753	3	545	0	multi-exon	FALSE	canonical	3	9	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCGACTGCATTATCTCAT	7109	False	NA	-10	True	AATAAA	-18	NA	7582985	7581973	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7582532_7582875
H1_mix_00037055	chr17	-	1046	2	FSM	ENSG00000233223.4	ENST00000690435.1	1442	2	328	68	81	-61	multi-exon	FALSE	canonical	3	18	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGCTGGGGGGGGGGGG	6645	False	NA	-72	True	CATAAA	-11	NA	7583449	7582035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7582532_7582899
H1_mix_00037056	chr17	-	1320	2	FSM	ENSG00000129194.8	ENST00000250055.3	1320	2	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	0	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTCTCCAGTCTTTATT	0	True	NA	-5	True	ATTAAA	-19	NA	7590094	7588177	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7588547_7589143
H1_mix_00037057	chr17	-	2987	17	FSM	ENSG00000129245.12	ENST00000250113.12	2987	17	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_9	21.2888431754757	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGGCTCCTGTGCCTTC	-26	True	NA	-1	True	AATAAA	-15	NA	7614897	7591229	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7591926_7592253_7592355_7592503_7592600_7592693_7592895_7592983_7593182_7593402_7593626_7593917_7594005_7594237_7594348_7594678_7594758_7595823_7595995_7601408_7601526_7602908_7603003_7603756_7603906_7604008_7604081_7605644_7605739_7606096_7606150_7614451
H1_mix_00037058	chr17	-	462	2	FSM	ENSG00000129245.12	ENST00000571079.1	462	2	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCAGATTGGGCTGGGCT	NA	False	NA	NA	False	NA	NA	NA	7594332	7593578	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7593626_7593917
H1_mix_00037059	chr17	-	289	3	FSM	ENSG00000129245.12	ENST00000573957.1	582	3	0	293	0	4	multi-exon	FALSE	canonical	3	241	junction_1	17.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGTATATACAGTTAGAG	NA	False	NA	NA	False	NA	NA	NA	7601436	7594667	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7594758_7595823_7595995_7601408
H1_mix_00037060	chr17	-	368	3	FSM	ENSG00000129245.12	ENST00000576693.1	477	3	0	109	0	-109	multi-exon	FALSE	canonical	3	245	junction_2	20.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGCAGAAAGAGAAGGGC	NA	False	NA	NA	False	NA	NA	NA	7604066	7602841	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7603003_7603756_7603906_7604008
H1_mix_00037061	chr17	-	912	6	FSM	ENSG00000141504.12	ENST00000269298.10	912	6	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_5	113.118345108121	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTTGGGTCTTTCTT	20	True	NA	NA	False	AATAAA	-20	NA	7627821	7626233	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7626615_7626752_7626794_7626942_7627045_7627142_7627227_7627362_7627415_7627569
H1_mix_00037062	chr17	-	977	6	FSM	ENSG00000141504.12	ENST00000380466.6	974	6	0	-3	0	0	multi-exon	FALSE	canonical	3	189	junction_2	99.2298342233826	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTTGGGTCTTTCTT	-28	True	NA	NA	False	AATAAA	-20	NA	7627869	7626233	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7626615_7626752_7626794_7626942_7627045_7627142_7627227_7627362_7627415_7627552
H1_mix_00037065	chr17	-	3252	11	FSM	ENSG00000141510.18	ENST00000269305.9	2512	11	9	-749	0	730	multi-exon	FALSE	canonical	3	224	junction_10	21.9462980933004	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGCTTGAAGGGGCAGT	7	True	NA	NA	False	GGGGCT	-45	NA	7687481	7667671	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7669691_7670608_7670716_7673534_7673609_7673700_7673838_7674180_7674291_7674858_7674972_7675052_7675237_7675993_7676273_7676381_7676404_7676520_7676623_7687376
H1_mix_00037066	chr17	-	524	3	FSM	ENSG00000183011.14	ENST00000575771.6	520	3	0	-4	0	4	multi-exon	FALSE	canonical	3	316	junction_2	89	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTCTGTGTGTAGCTG	-40	True	NA	0	True	ATTAAA	-17	NA	7857559	7856680	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7856844_7857014_7857199_7857382
H1_mix_00037067	chr17	-	557	3	FSM	ENSG00000183011.14	ENST00000575071.5	553	3	0	-4	0	4	multi-exon	FALSE	canonical	3	84	junction_1	116	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTCTGTGTGTAGCTG	-43	True	NA	0	True	ATTAAA	-17	NA	7857562	7856680	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7856844_7856984_7857199_7857382
H1_mix_00037068	chr17	-	1003	2	FSM	ENSG00000183011.14	ENST00000333775.9	999	2	0	-4	0	4	multi-exon	FALSE	canonical	3	494	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTCTGTGTGTAGCTG	90	False	NA	0	True	ATTAAA	-17	NA	7857854	7856680	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7856844_7857014
H1_mix_00037069	chr17	-	2697	2	FSM	ENSG00000179859.10	ENST00000324348.9	2850	2	126	27	126	-26	multi-exon	FALSE	canonical	2	7	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTCAATAAATATTTGTT	123	False	NA	-33	True	NA	NA	NA	7916163	7913365	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7915578_7915678
H1_mix_00037070	chr17	-	2872	14	FSM	ENSG00000170049.10	ENST00000303790.3	2879	14	7	0	7	0	multi-exon	FALSE	canonical	2	7	junction_13	3.89962826327279	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTCCTTGTACTTCTCA	-18	True	NA	NA	False	TTTAAA	-16	NA	7929849	7921858	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7923180_7923455_7923545_7923710_7923832_7923967_7924063_7924144_7924266_7924414_7924501_7925096_7925184_7925682_7925727_7925930_7925976_7926058_7926104_7927343_7927424_7927656_7927695_7927782_7927827_7929193
H1_mix_00037071	chr17	-	816	4	FSM	ENSG00000170043.12	ENST00000303731.9	812	4	0	-4	0	0	multi-exon	FALSE	canonical	3	1127	junction_2	60.0721788073869	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGCGTGTTGGTTTGA	3	True	NA	-3	True	AATAAA	-20	NA	7931946	7930344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7930735_7931010_7931150_7931505_7931577_7931730
H1_mix_00037072	chr17	-	759	5	FSM	ENSG00000170043.12	ENST00000540486.5	759	5	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_4	449.887208086649	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGCGTGTTGGTTTGA	1080	False	NA	-3	True	AATAAA	-20	NA	7931999	7930344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7930735_7931010_7931150_7931505_7931577_7931730_7931830_7931939
H1_mix_00037073	chr17	-	561	3	FSM	ENSG00000170043.12	ENST00000575639.1	561	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	616.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCCCAGAGCAACAGCCTA	28	True	NA	NA	False	NA	NA	NA	7931921	7930503	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7930735_7931010_7931150_7931730
H1_mix_00037074	chr17	-	4678	23	FSM	ENSG00000179094.16	ENST00000317276.9	4676	23	0	-2	0	2	multi-exon	FALSE	canonical	3	88	junction_22	12.1175373217416	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTTTGTGGAATGAAGTT	-8	True	NA	-2	True	GATAAA	-9	NA	8152404	8140469	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8141341_8141804_8141956_8142268_8142459_8142648_8142836_8143265_8143877_8144750_8144994_8145957_8146138_8146371_8146503_8146593_8146766_8146896_8147003_8147249_8147382_8147469_8147579_8147673_8147828_8147996_8148104_8148180_8148260_8148643_8148787_8149258_8149311_8149461_8149664_8149754_8149877_8149970_8150126_8150218_8150318_8150431_8150846_8152336
H1_mix_00037075	chr17	-	4666	23	NIC	ENSG00000179094.16	novel	4676	23	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_22	16.1137485571168	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGACTTTGTGGAATGAAG	-22	True	NA	-4	True	GATAAA	-7	NA	8156364	8140471	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_8141341_8141804_8141956_8142268_8142459_8142648_8142836_8143265_8143877_8144750_8144994_8145957_8146138_8146371_8146503_8146593_8146766_8146896_8147003_8147249_8147382_8147469_8147579_8147673_8147828_8147996_8148104_8148180_8148260_8148643_8148787_8149258_8149311_8149461_8149664_8149754_8149877_8149970_8150126_8150218_8150318_8150431_8150846_8156306
H1_mix_00037079	chr17	-	874	5	FSM	ENSG00000220205.9	ENST00000488857.5	874	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	118.574870862253	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCCCAACCCTCAGCCGT	9921	False	NA	NA	False	NA	NA	NA	8162932	8160818	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8160872_8161472_8161525_8161607_8161767_8162248_8162370_8162443
H1_mix_00037080	chr17	-	3488	4	FSM	ENSG00000220205.9	ENST00000481878.1	557	4	-759	-2172	-161	2	multi-exon	FALSE	canonical	3	201	junction_3	45.7456737480897	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTCTAAGATCTTTTTT	9879	False	NA	0	True	AATAAA	-20	NA	8163707	8159146	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8161525_8161607_8161767_8162248_8162370_8162877
H1_mix_00037081	chr17	-	2416	5	FSM	ENSG00000179029.15	ENST00000437139.7	2263	5	-7	-146	0	146	multi-exon	TRUE	canonical	3	74	junction_2	3.93700393700591	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTGAGACGGAGTC	-13	True	NA	NA	False	NA	NA	NA	8176387	8172310	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8174273_8174519_8174617_8175756_8175858_8175958_8176027_8176199
H1_mix_00037082	chr17	-	1210	2	FSM	ENSG00000179029.15	ENST00000449985.6	1210	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTCTTTGTTTTTTGTC	1	True	NA	-27	True	AATACA	-3	NA	8176373	8173236	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8174273_8176199
H1_mix_00037083	chr17	-	758	5	FSM	ENSG00000179029.15	ENST00000316425.9	756	5	0	-2	0	0	multi-exon	FALSE	canonical	3	10	junction_3	30.7032164438842	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGACTTATATACAGTTT	-25	True	NA	-11	True	AATAAA	-19	NA	8176399	8173998	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8174273_8174519_8174617_8175756_8175876_8175958_8176027_8176199
H1_mix_00037085	chr17	-	1849	1	FSM	ENSG00000196544.8	ENST00000389017.6	1836	1	0	-13	0	13	mono-exon	FALSE	NA	NA	NA	NA	NA	2913	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTGGGGTTGCAGTGA	-10	True	NA	0	True	ATTAAA	-30	NA	8190180	8188331	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8188300_8190200
H1_mix_00037086	chr17	-	1251	9	FSM	ENSG00000178999.13	ENST00000585124.6	1243	9	0	-8	0	7	multi-exon	TRUE	canonical	3	539	junction_8	87.8335606417046	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTTCTAGGTGGAGGCT	3	True	NA	1	True	AATAAA	-30	NA	8210575	8204725	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8205045_8205215_8205391_8206490_8206640_8206749_8206889_8207175_8207368_8207570_8207626_8207737_8207841_8210176_8210250_8210529
H1_mix_00037087	chr17	-	1184	8	FSM	ENSG00000178999.13	ENST00000534871.5	1167	8	0	-17	0	7	multi-exon	FALSE	canonical	3	43	junction_7	245.48228249796	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTTCTAGGTGGAGGCT	-3	True	NA	1	True	AATAAA	-30	NA	8210581	8204725	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8205045_8205215_8205391_8206490_8206640_8206749_8206889_8207175_8207368_8207570_8207626_8207737_8207841_8210529
H1_mix_00037088	chr17	-	1261	9	FSM	ENSG00000178999.13	ENST00000316199.10	1254	9	0	-7	0	7	multi-exon	FALSE	canonical	3	32	junction_5	234.674475337647	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTTCTAGGTGGAGGCT	-4	True	NA	1	True	AATAAA	-30	NA	8210582	8204725	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8205045_8205215_8205391_8206490_8206640_8206749_8206889_8207175_8207371_8207570_8207626_8207737_8207841_8210176_8210250_8210529
H1_mix_00037089	chr17	-	1131	9	NIC	ENSG00000178999.13	novel	1254	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	240.099426019722	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTAGATGTTTCTAGGT	20	False	NA	-6	True	AATAAA	-23	NA	8210558	8204732	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_8205045_8205215_8205391_8206490_8206640_8206749_8206935_8207317_8207368_8207570_8207626_8207737_8207841_8210176_8210250_8210529
H1_mix_00037091	chr17	-	7033	23	FSM	ENSG00000178971.16	ENST00000651323.1	7039	23	0	6	0	-6	multi-exon	TRUE	canonical	3	91	junction_4	16.5427695124032	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGTTAGTTCTTGGT	-7	True	NA	-7	True	AATAAA	-16	NA	8248056	8224820	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8228320_8228502_8228630_8228726_8228893_8229141_8229207_8229301_8229447_8229890_8229969_8230293_8230469_8230562_8230652_8231275_8231470_8231725_8231816_8231902_8232228_8232360_8232476_8232905_8233033_8234454_8234656_8234748_8234927_8235052_8235286_8235830_8235960_8236057_8236343_8237374_8237520_8238030_8238243_8238391_8238630_8242984_8243149_8248003
H1_mix_00037092	chr17	-	4795	22	FSM	ENSG00000178971.16	ENST00000449476.7	4795	22	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_18	33.8359387087062	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCCCTGAATCACTAGCG	7	True	NA	-5	True	NA	NA	NA	8248042	8226874	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8228320_8228502_8228630_8228726_8228893_8229301_8229447_8229890_8229969_8230293_8230469_8230562_8230652_8231275_8231470_8231725_8231816_8231902_8232228_8232360_8232476_8232905_8233033_8234454_8234656_8234748_8234927_8235052_8235286_8235830_8235960_8236057_8236343_8237374_8237415_8238030_8238243_8238391_8238630_8242984_8243149_8248003
H1_mix_00037093	chr17	-	569	3	FSM	ENSG00000178971.16	ENST00000581729.1	569	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	62.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAATATGTCCTCTGATT	NA	False	NA	NA	False	NA	NA	NA	8229405	8227981	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8228320_8228502_8228630_8229301
H1_mix_00037097	chr17	-	542	3	FSM	ENSG00000178971.16	ENST00000581967.1	542	3	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	4.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTCCACCGTAGCTCC	NA	False	NA	NA	False	NA	NA	NA	8234768	8232711	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8233033_8234454_8234656_8234748
H1_mix_00037100	chr17	-	1940	5	FSM	ENSG00000125434.11	ENST00000577745.2	1940	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	2.54950975679639	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGATTGTCTTATGTTTA	-33	True	NA	2	True	TATAAA	-17	NA	8295400	8290060	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8290679_8290841_8290977_8291332_8291486_8292522_8292589_8294432
H1_mix_00037101	chr17	-	528	4	FSM	ENSG00000161970.15	ENST00000648839.1	528	4	0	0	0	0	multi-exon	FALSE	canonical	3	8720	junction_3	2137.3447701919	3779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTGTGGTGATTT	-2	True	NA	95	True	ATTAAA	-20	NA	8383193	8377515	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8377693_8379795_8379937_8382142_8382316_8383156
H1_mix_00037102	chr17	-	870	4	FSM	ENSG00000161970.15	ENST00000584164.6	870	4	0	0	0	0	multi-exon	FALSE	canonical	3	969	junction_3	5623.40444531207	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTTTTGTGTGTGGT	-5	True	NA	90	True	AATAAA	-43	NA	8383164	8377520	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8377693_8379795_8379937_8382142_8382316_8382780
H1_mix_00037103	chr17	-	456	2	FSM	ENSG00000161970.15	ENST00000578069.1	456	2	0	0	0	0	multi-exon	FALSE	canonical	3	11442	junction_1	0	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGAGCCTGTGTTTTGTGT	3107	False	NA	85	True	AATAAA	-38	NA	8380084	8377525	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8377693_8379795
H1_mix_00037104	chr17	-	774	4	FSM	ENSG00000161970.15	ENST00000582556.5	763	4	0	-11	0	0	multi-exon	FALSE	canonical	3	648	junction_3	5772.25370967778	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTTGAAACAAAGAGCC	25	False	NA	73	True	AATAAA	-26	NA	8383166	8377537	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8377693_8379795_8379937_8382142_8382316_8382861
H1_mix_00037105	chr17	-	1002	3	FSM	ENSG00000161970.15	ENST00000578812.5	1002	3	0	0	0	0	multi-exon	FALSE	canonical	3	8720	junction_2	2617	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTCTATATGTTCTAGT	-2	True	NA	NA	False	AATAAA	-38	NA	8383193	8379144	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8379937_8382142_8382316_8383156
H1_mix_00037107	chr17	-	2533	1	FSM	ENSG00000189051.6	ENST00000344001.3	2786	1	-93	346	-93	-346	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGTCTAAAAAAAAAAAAAAA	4241	False	NA	NA	False	NA	NA	NA	8393582	8391049	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8391000_8393600
H1_mix_00037108	chr17	-	7971	42	FSM	ENSG00000133026.14	ENST00000379980.8	7694	42	0	-277	0	277	multi-exon	TRUE	canonical	0	0	junction_36	293.943680944028	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAATGAAGCTCACTGCT	-2	True	NA	NA	False	NA	NA	NA	8630761	8473929	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8475949_8476875_8477049_8478337_8478447_8480109_8480319_8480401_8480526_8481321_8481411_8484137_8484267_8487432_8487595_8490339_8490553_8492296_8492510_8492775_8493025_8493732_8493886_8495136_8495242_8499269_8499477_8500825_8500971_8504693_8504907_8506317_8506490_8508553_8508678_8509811_8509950_8512450_8512658_8513537_8513670_8513785_8513895_8518630_8518792_8518880_8518951_8520877_8521000_8521091_8521286_8535386_8535502_8535757_8535932_8542106_8542281_8545447_8545601_8546543_8546663_8548312_8548409_8548643_8548788_8552045_8552145_8553954_8554019_8569719_8569813_8576642_8576670_8577235_8577339_8589080_8589109_8604825_8604983_8622901_8623278_8630653
H1_mix_00037109	chr17	-	7667	41	FSM	ENSG00000133026.14	ENST00000269243.8	7662	41	0	-5	0	0	multi-exon	FALSE	canonical	3	835	junction_36	170.519307924352	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTTTTCTCACCTTCT	-2	True	NA	-13	True	AATAAA	-38	NA	8630761	8474206	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8475949_8476875_8477049_8478337_8478447_8480109_8480319_8480401_8480526_8481321_8481411_8484137_8484267_8487432_8487595_8490339_8490553_8492296_8492510_8492775_8493025_8493732_8493886_8495136_8495242_8499269_8499477_8500825_8500971_8504693_8504907_8506317_8506490_8508553_8508678_8509811_8509950_8512450_8512658_8513537_8513670_8513785_8513895_8518630_8518792_8518880_8518951_8520877_8521000_8521091_8521286_8535386_8535502_8535757_8535932_8542106_8542281_8545447_8545601_8546543_8546663_8548312_8548409_8548643_8548788_8552045_8552145_8553954_8554019_8569719_8569813_8577235_8577339_8589080_8589109_8604825_8604983_8622901_8623278_8630653
H1_mix_00037110	chr17	-	7990	41	NIC	ENSG00000133026.14	novel	8036	42	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_40	242.389356201959	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGAATCTGTTTTCTCAC	-17	True	NA	-18	True	AATAAA	-33	NA	8631356	8474211	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_8475949_8476875_8477049_8478337_8478447_8480109_8480319_8480401_8480526_8481321_8481411_8484137_8484267_8487432_8487595_8490339_8490553_8492296_8492510_8492775_8493025_8493732_8493886_8495136_8495242_8499269_8499477_8500825_8500971_8504693_8504907_8506317_8506490_8508553_8508678_8509811_8509950_8512450_8512658_8513537_8513670_8513785_8513895_8518630_8518792_8518880_8518951_8520877_8521000_8521091_8521286_8535386_8535502_8535757_8535932_8542106_8542281_8545447_8545601_8546543_8546663_8548312_8548409_8548643_8548788_8552045_8552145_8553954_8554019_8569719_8569813_8577235_8577339_8589080_8589109_8604825_8604983_8622901_8623278_8630920
H1_mix_00037115	chr17	-	2573	1	FSM	ENSG00000185156.6	ENST00000329805.6	2256	1	-39	-278	-39	278	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCACTTTGGGAGGACGA	NA	False	NA	NA	False	NA	NA	NA	8799404	8796831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8796800_8799400
H1_mix_00037116	chr17	-	3034	20	FSM	ENSG00000276231.5	ENST00000619866.5	3053	20	4	15	4	0	multi-exon	TRUE	canonical	1	1	junction_17	2.40728350021669	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTTTCATCTCATACCT	4	True	NA	-15	True	AATAAA	-17	NA	8867670	8802736	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8803430_8804040_8804154_8819082_8819199_8821845_8821937_8822586_8822658_8822995_8823087_8823386_8823498_8827171_8827295_8828111_8828191_8828566_8828991_8829705_8829793_8832888_8833046_8835272_8835457_8836546_8836617_8836790_8836924_8837802_8837872_8838563_8838656_8839613_8839698_8849781_8849886_8867528
H1_mix_00037117	chr17	-	4491	19	FSM	ENSG00000141506.15	ENST00000447110.6	4491	19	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_7	30.6560468729506	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATGACCAGTAGTTACT	1	True	NA	-12	True	AATAAA	-18	NA	8965707	8878915	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8880787_8880904_8881018_8881629_8881713_8881787_8881882_8884706_8884784_8886228_8886323_8886476_8886606_8887095_8887222_8887520_8887684_8888170_8888892_8889138_8889223_8889972_8890127_8890737_8890913_8893585_8893656_8904776_8904916_8905668_8905738_8909073_8909175_8911391_8911508_8965595
H1_mix_00037118	chr17	-	2653	18	FSM	ENSG00000141506.15	ENST00000584803.1	2653	18	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	31.1771365078714	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGCCCAGCGCCAGACT	4679	False	NA	NA	False	NA	NA	NA	8911507	8880638	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8880787_8880904_8881018_8881629_8881713_8881787_8881882_8884706_8884784_8886228_8886323_8886476_8886603_8887095_8887222_8887520_8887684_8888170_8888892_8889138_8889223_8889972_8890127_8890737_8890913_8893585_8893656_8904776_8904916_8905668_8905738_8909073_8909175_8911391
H1_mix_00037119	chr17	-	435	1	FSM	ENSG00000273816.1	ENST00000614522.1	232	1	-247	44	-247	-44	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTAATGACTGAATTGTT	NA	False	NA	NA	False	NA	NA	NA	9245144	9244709	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_9244700_9245100
H1_mix_00037120	chr17	-	1127	8	FSM	ENSG00000170310.15	ENST00000306357.9	830	8	0	-297	0	297	multi-exon	FALSE	canonical	3	454	junction_7	70.7504957796143	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTACCAGAGCAAGACTCC	17	True	NA	NA	False	NA	NA	NA	9575820	9250173	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_9250646_9378551_9378654_9491828_9491922_9505037_9505163_9545171_9545283_9557433_9557529_9568370_9568471_9575791
H1_mix_00037121	chr17	-	644	6	FSM	ENSG00000170310.15	ENST00000575858.5	638	6	0	-6	0	5	multi-exon	FALSE	canonical	3	56	junction_4	207.526962103723	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCATTGCTTCAGTAAAG	2	True	NA	4	True	AATAAA	-23	NA	9575835	9250465	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_9250646_9378551_9378654_9491828_9491922_9505037_9505163_9568370_9568471_9575791
H1_mix_00037122	chr17	-	2376	1	FSM	ENSG00000271851.1	ENST00000607496.1	2374	1	0	-2	0	2	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGTGCTTTTGAATCCA	NA	False	NA	2	True	AATAAA	-19	NA	9555696	9553320	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_9553300_9555700
H1_mix_00037124	chr17	-	8404	14	FSM	ENSG00000007237.19	ENST00000432992.7	8269	14	-135	0	-135	0	multi-exon	TRUE	canonical	1	4	junction_13	5.74610750676403	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCATCTCGTTTTTTTTTT	160	False	NA	45	True	TATAAA	-20	NA	10198741	9910605	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_9917342_9918000_9918100_9919625_9919706_9925475_9925600_9926640_9926770_9934165_9934245_9940125_9940201_9943120_9943237_9946893_9946984_9959201_9959256_9969676_9969763_9981803_9981885_10019776_10019898_10198207
H1_mix_00037126	chr17	-	498	5	FSM	ENSG00000125414.19	ENST00000578017.5	572	5	74	0	74	0	multi-exon	FALSE	canonical	3	17	junction_2	2.04633819296811	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACGCCAAGACCGTGAGGAA	2152	False	NA	NA	False	NA	NA	NA	10547618	10543749	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_10543804_10543901_10544017_10544099_10544128_10545345_10545503_10547474
H1_mix_00037128	chr17	-	9580	6	FSM	ENSG00000133028.12	ENST00000255390.10	9577	6	0	-3	0	3	multi-exon	FALSE	canonical	3	259	junction_4	42.1881499949927	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTTTTTTTTGTAGCT	-6	True	NA	NA	False	AATAAA	-20	NA	10697533	10672470	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_10681254_10686726_10686843_10691871_10691965_10692763_10692962_10695740_10695832_10697234
H1_mix_00037130	chr17	-	2800	6	FSM	ENSG00000187824.9	ENST00000341871.8	2813	6	0	13	0	-13	multi-exon	FALSE	canonical	3	23	junction_5	4.3081318457076	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATTTCTATTATTAAAAT	-18	True	NA	NA	False	ATTAAA	-4	NA	10730023	10713307	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_10715589_10723269_10723330_10725010_10725135_10726203_10726265_10729030_10729061_10729779
H1_mix_00037131	chr17	-	1402	5	FSM	ENSG00000187824.9	ENST00000455996.6	1402	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	9.28372231381357	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGCTGGGATTACAGGT	-18	True	NA	NA	False	NA	NA	NA	10730023	10714675	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_10715589_10723269_10723330_10725010_10725135_10726203_10726265_10729779
H1_mix_00037132	chr17	-	709	2	NNC	ENSG00000264016.3	novel	750	2	NA	NA	13938	20	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	0	28	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTACCATAAACATTAGCT	NA	False	NA	17	True	AATAAA	-45	NA	10755051	10741236	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_10741724_10754829
H1_mix_00037134	chr17	-	3259	6	FSM	ENSG00000154957.14	ENST00000580613.5	2250	6	-1003	-6	-1003	0	multi-exon	FALSE	canonical	3	36	junction_2	18.680471086137	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGTTCACTGTGTGT	3537	False	NA	-1	True	AATAAA	-26	NA	11993920	11977438	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_11978745_11983296_11983408_11984112_11984198_11990461_11990551_11990973_11991164_11992442
H1_mix_00037135	chr17	-	2476	7	FSM	ENSG00000154957.14	ENST00000580306.7	2295	7	-20	-161	-20	161	multi-exon	FALSE	canonical	3	21	junction_6	25.0399680510978	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCAGTGCTGGCAACACC	NA	False	NA	NA	False	NA	NA	NA	11997495	11977277	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_11978745_11983296_11983408_11984112_11984198_11990461_11990551_11990973_11991164_11992442_11992912_11997430
H1_mix_00037136	chr17	-	2319	7	FSM	ENSG00000154957.14	ENST00000454073.7	2261	7	-45	-13	-27	0	multi-exon	FALSE	canonical	3	21	junction_6	27.4043792120894	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGTTCACTGTGTGT	NA	False	NA	-1	True	AATAAA	-26	NA	11997502	11977438	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_11978745_11983296_11983405_11984112_11984198_11990461_11990551_11990973_11991164_11992442_11992912_11997430
H1_mix_00037137	chr17	-	3767	24	FSM	ENSG00000006744.19	ENST00000338034.9	3767	24	0	0	0	0	multi-exon	FALSE	canonical	3	722	junction_14	63.1821563190641	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGACAACGATTTGTAC	-30	True	NA	-6	True	AATAAA	-19	NA	13018027	12991611	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_12993046_12993686_12993832_12994424_12994504_12994763_12994885_12994962_12995063_12995702_12995813_12995939_12995979_12996546_12996686_12998411_12998509_13000155_13000275_13002273_13002360_13002440_13002580_13003478_13003575_13004988_13005102_13005752_13005826_13005920_13005980_13010612_13010672_13011662_13011783_13013206_13013276_13014438_13014497_13015767_13015833_13016861_13016933_13017070_13017122_13017702
H1_mix_00037138	chr17	-	2671	23	FSM	ENSG00000006744.19	ENST00000426905.7	2671	23	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_17	180.223948152301	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGCAGTTTTTAAAGAAGT	-2	True	NA	NA	False	NA	NA	NA	13017999	12992559	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_12993046_12993686_12993832_12994424_12994504_12994763_12994885_12994962_12995063_12995702_12995813_12995939_12995979_12996546_12996686_12998411_12998509_13000155_13000275_13002273_13002360_13002440_13002580_13003478_13003575_13004988_13005102_13005752_13005826_13005920_13005980_13010612_13010672_13013206_13013276_13014438_13014497_13015767_13015833_13016861_13016933_13017070_13017122_13017702
H1_mix_00037139	chr17	-	4410	2	FSM	ENSG00000153976.3	ENST00000284110.2	4186	2	-218	-6	-218	6	multi-exon	FALSE	canonical	3	40	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAACATAGATATTTTTG	NA	False	NA	NA	False	AATAAA	-30	NA	13602147	13494025	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_13496819_13600530
H1_mix_00037141	chr17	-	2286	3	FSM	ENSG00000236088.11	ENST00000660804.1	2291	3	5	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	29.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCTGAAATATACTTTAT	-17	True	NA	NA	False	NA	NA	NA	14069478	14028901	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_14030572_14034007_14034417_14069271
H1_mix_00037142	chr17	-	549	1	FSM	ENSG00000230897.1	ENST00000412454.1	459	1	-41	-49	-41	49	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATTGAAAAGATGAATAATA	0	True	NA	NA	False	AATAAA	-24	NA	14705575	14705026	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_14705000_14705600
H1_mix_00037143	chr17	-	1826	5	FSM	ENSG00000109099.16	ENST00000674673.1	2423	5	587	10	2	1	multi-exon	FALSE	canonical	2	6	junction_4	3.8405728739343	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTGGTCTCTCTTGAGT	9689	False	NA	-4	True	AATAAA	-12	NA	15262603	15229782	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_15231081_15239470_15239612_15259093_15259194_15260649_15260762_15262428
H1_mix_00037145	chr17	-	1741	9	FSM	ENSG00000125409.13	ENST00000395930.6	1740	9	0	-1	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.4790199457749	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGTCTCGGAAAGCCTT	2	True	NA	NA	False	ATTAAA	-28	NA	15341597	15303810	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_15304153_15308663_15308819_15312258_15312482_15314086_15314231_15319076_15319148_15327991_15328076_15331006_15331615_15340027_15340062_15341517
H1_mix_00037148	chr17	-	1527	6	FSM	ENSG00000175106.17	ENST00000225576.7	1527	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	94.3152161636711	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGGCCTTCGTAATGAAA	78	False	NA	NA	False	ATTAAA	-19	NA	15563544	15502263	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_15503233_15545784_15545917_15547058_15547149_15553684_15553830_15555281_15555365_15563436
H1_mix_00037151	chr17	-	2494	11	NIC	ENSG00000221926.13	novel	3358	12	NA	NA	0	-3	intron_retention	FALSE	canonical	3	26	junction_5	9.79846926820715	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGTGCCAGATACCGTT	5	True	NA	-10	True	AATAAA	-19	NA	15684300	15627962	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_15629199_15631618_15631715_15632508_15632675_15636035_15636270_15642720_15642817_15677175_15677281_15677574_15677722_15680864_15680954_15682853_15682952_15683035_15683158_15684195
H1_mix_00037152	chr17	-	3180	7	FSM	ENSG00000221926.13	ENST00000416464.6	3184	7	0	4	0	2	multi-exon	FALSE	canonical	0	0	junction_6	21.0317220724631	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTATGTGCCAGATACCGT	6	True	NA	-11	True	AATAAA	-18	NA	15684299	15627963	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_15629199_15631618_15631715_15632508_15632675_15636035_15636270_15642720_15642817_15680864_15680954_15683035
H1_mix_00037153	chr17	-	2429	11	NIC	ENSG00000221926.13	novel	3358	12	NA	NA	-2	0	intron_retention	FALSE	canonical	1	1	junction_7	16.082599292403	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTATGTGCCAGATACC	28	False	NA	-13	True	AATAAA	-16	NA	15684277	15627965	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_15629199_15631618_15631715_15632508_15632675_15636035_15636270_15642720_15642817_15677175_15677281_15677574_15677683_15680864_15680954_15682853_15682952_15683035_15683158_15684195
H1_mix_00037154	chr17	-	552	5	FSM	ENSG00000221926.13	ENST00000578744.5	552	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	24.2693221990232	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCAAAGTTATCACGGAATC	3375	False	NA	NA	False	GATAAA	-13	NA	15680930	15632593	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_15632675_15636035_15636270_15642720_15642817_15658801_15658877_15680864
H1_mix_00037155	chr17	-	1019	1	FSM	ENSG00000233966.1	ENST00000450587.1	669	1	-184	-166	-184	166	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATAATAATAAGAGAAT	NA	False	NA	NA	False	AATAAA	-26	NA	15705084	15704065	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_15704100_15705100
H1_mix_00037156	chr17	-	1281	8	FSM	ENSG00000214941.8	ENST00000490395.5	1264	8	0	-17	0	17	multi-exon	TRUE	canonical	3	19	junction_2	238.555431456823	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTTTTTTCCAGCAGCC	11	True	NA	13	True	NA	NA	NA	15999650	15976542	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_15977093_15977578_15977701_15977799_15977914_15978043_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999505
H1_mix_00037158	chr17	-	2037	5	FSM	ENSG00000214941.8	ENST00000399277.6	2020	5	0	-17	0	17	multi-exon	FALSE	canonical	3	327	junction_4	107.66237736554	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTTTTTTCCAGCAGCC	1	True	NA	13	True	NA	NA	NA	15999704	15976542	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999518
H1_mix_00037159	chr17	-	1787	6	FSM	ENSG00000214941.8	ENST00000474716.5	671	6	51	-1167	0	0	multi-exon	FALSE	canonical	3	146	junction_5	173.606912304781	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGACTCAGCATAACTTA	882	False	NA	-4	True	GATAAA	-32	NA	15999588	15976559	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_15977914_15978043_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999505
H1_mix_00037160	chr17	-	703	6	FSM	ENSG00000214941.8	ENST00000472495.5	703	6	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_5	118.174447322592	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTCTTTTTTTTTTTCT	786	False	15999705	-1	True	AATAAA	-28	NA	15999684	15977726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_15977914_15978043_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999518
H1_mix_00037161	chr17	-	723	6	FSM	ENSG00000214941.8	ENST00000460315.5	723	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_5	206.220658518976	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTCTTTTTTTTTTTCT	17	True	NA	-1	True	AATAAA	-28	NA	15999688	15977726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_15977914_15978043_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999502
H1_mix_00037162	chr17	-	879	5	FSM	ENSG00000214941.8	ENST00000491631.5	879	5	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_4	185.73906428105	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTCTTTTTTTTTTTCT	-12	True	NA	-1	True	AATAAA	-28	NA	15999717	15977726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999505
H1_mix_00037163	chr17	-	924	6	FSM	ENSG00000214941.8	ENST00000486706.6	918	6	0	-6	0	0	multi-exon	FALSE	canonical	3	39	junction_3	240.875569537469	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTCTTTTTTTTTTTCT	-8	True	NA	-1	True	AATAAA	-28	NA	15999669	15977726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_15978164_15981039_15981145_15986799_15986893_15987265_15987369_15993756_15993779_15999505
H1_mix_00037166	chr17	-	331	1	FSM	ENSG00000275413.1	ENST00000616896.1	331	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAAACTTGTTACCCTTG	5164	False	NA	-13	True	AATAAA	-17	NA	16023653	16023322	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_16023300_16023700
H1_mix_00037167	chr17	-	10705	46	FSM	ENSG00000141027.22	ENST00000268712.8	10705	46	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_27	61.654769623152	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTCAGTAACCCCTGCAG	3	True	NA	-49	True	AATAAA	-24	NA	16215534	16029156	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_16032484_16034764_16034945_16039432_16039655_16040440_16040495_16046950_16047094_16048844_16048989_16057513_16057738_16057906_16058065_16058470_16058600_16061400_16061895_16062104_16062271_16064067_16064188_16064869_16065020_16065484_16065695_16067893_16068122_16070164_16070526_16071408_16071666_16072144_16072229_16073428_16073570_16075533_16075703_16079963_16080065_16080407_16080510_16080606_16080728_16086281_16086443_16091862_16092059_16098366_16098497_16101249_16101758_16108785_16108913_16117887_16118028_16119422_16119486_16121051_16121270_16126081_16126207_16137310_16137413_16138157_16138213_16139007_16139187_16143605_16143697_16146375_16146549_16149450_16149518_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16215361
H1_mix_00037168	chr17	-	9791	46	NIC	ENSG00000141027.22	novel	10705	46	NA	NA	9	-951	combination_of_known_junctions	FALSE	canonical	3	133	junction_32	50.5136383001758	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATGTGTCAATCGACT	17	False	NA	-17	True	AATACA	-18	NA	16215520	16030107	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_16032484_16034764_16034945_16039432_16039655_16040440_16040495_16046950_16047094_16048844_16048989_16057513_16057738_16057906_16058065_16058470_16058600_16061400_16061895_16062104_16062271_16064067_16064188_16064869_16065020_16065484_16065695_16067893_16068122_16070164_16070526_16071408_16071666_16072144_16072229_16073428_16073570_16075533_16075703_16079963_16080065_16080407_16080510_16080606_16080728_16086281_16086443_16091862_16092059_16098366_16098497_16101249_16101806_16108785_16108913_16117887_16118028_16119422_16119486_16121051_16121270_16126081_16126210_16137310_16137413_16138157_16138213_16139007_16139187_16143605_16143697_16146375_16146549_16149450_16149518_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16215361
H1_mix_00037169	chr17	-	9144	45	NIC	ENSG00000141027.22	novel	10705	46	NA	NA	8	876	combination_of_known_splicesites	FALSE	canonical	3	4	junction_14	65.6777562443272	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTCACAGTTTTCTGCT	16	True	NA	-34	True	TATAAA	-37	NA	16215521	16030527	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_16032484_16034764_16034945_16039432_16039655_16040440_16040495_16046950_16047094_16048844_16048989_16057513_16057738_16057906_16058065_16058470_16058600_16061400_16061895_16062104_16062271_16064067_16064188_16064869_16065020_16065484_16065695_16070164_16070526_16071408_16071666_16072144_16072229_16073428_16073570_16075533_16075703_16079963_16080065_16080407_16080510_16080606_16080728_16086281_16086443_16091862_16092059_16098366_16098497_16101249_16101806_16108785_16108913_16117887_16118028_16119422_16119486_16121051_16121270_16126081_16126210_16137310_16137413_16138157_16138213_16139007_16139187_16143605_16143697_16146375_16146549_16149450_16149518_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16215361
H1_mix_00037171	chr17	-	10968	48	NIC	ENSG00000141027.22	novel	10705	46	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_25	66.3448335576461	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTCAGTAACCCCTGCAG	-11	True	NA	-49	True	AATAAA	-24	NA	16215548	16029156	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_16032484_16034764_16034945_16039432_16039655_16040440_16040495_16046950_16047094_16048844_16048989_16057513_16057738_16057906_16058065_16058470_16058600_16061400_16061895_16062104_16062271_16064067_16064188_16064869_16065020_16065484_16065695_16067893_16068122_16070164_16070526_16071408_16071666_16072144_16072229_16073428_16073570_16075533_16075703_16079963_16080065_16080407_16080510_16080606_16080728_16086281_16086443_16087171_16087346_16091862_16092059_16098366_16098497_16101249_16101806_16108785_16108913_16117887_16118028_16119422_16119486_16121051_16121270_16126081_16126207_16137310_16137413_16138157_16138213_16139007_16139187_16143605_16143697_16146375_16146549_16149450_16149518_16151589_16151617_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16215361
H1_mix_00037172	chr17	-	9818	47	NIC	ENSG00000141027.22	novel	10705	46	NA	NA	0	-957	combination_of_known_junctions	FALSE	canonical	3	137	junction_38	54.3513781447921	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATACAAAATATGTGTCAA	8	True	NA	-23	True	AATACA	-12	NA	16215529	16030113	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_16032484_16034764_16034945_16039432_16039655_16040440_16040495_16046950_16047094_16048844_16048989_16057513_16057738_16057906_16058065_16058470_16058600_16061400_16061895_16062104_16062271_16064067_16064188_16064869_16065020_16065484_16065695_16067893_16068122_16070164_16070526_16071408_16071666_16072144_16072229_16073428_16073570_16075533_16075703_16079963_16080065_16080407_16080510_16080606_16080728_16086281_16086443_16091862_16092059_16098366_16098497_16101249_16101806_16108785_16108913_16117887_16118028_16119422_16119486_16121051_16121270_16126081_16126207_16137310_16137413_16138157_16138213_16139007_16139187_16143605_16143697_16146375_16146549_16149450_16149518_16151589_16151617_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16215361
H1_mix_00037183	chr17	-	1259	7	NNC	ENSG00000166582.11	novel	1132	5	NA	NA	0	26836	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1096.16580507796	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAGAAAGAAAAGAAAAG	5	True	NA	NA	False	AAAAAG	-11	NA	16353445	16315697	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_16315734_16342536_16342942_16344596_16344712_16348615_16348686_16349218_16349334_16349930_16350030_16353026
H1_mix_00037184	chr17	-	1341	7	NNC	ENSG00000166582.11	novel	1770	5	NA	NA	0	26836	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1079.97988664399	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAGAAAGAAAAGAAAAG	5	True	NA	NA	False	AAAAAG	-11	NA	16353445	16315697	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_16315734_16342533_16342942_16344596_16344712_16348615_16348686_16349139_16349334_16349930_16350030_16353026
H1_mix_00037185	chr17	-	1787	5	FSM	ENSG00000166582.11	ENST00000476243.5	1770	5	0	-17	0	17	multi-exon	FALSE	canonical	3	558	junction_3	778.611705216406	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTTGTACTGTGATTT	-6	True	NA	0	True	AATAAA	-37	NA	16353456	16342516	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_16342942_16344596_16344712_16348615_16349334_16349930_16350030_16353026
H1_mix_00037186	chr17	-	1132	5	FSM	ENSG00000166582.11	ENST00000299736.5	1132	5	0	0	0	0	multi-exon	FALSE	canonical	3	1808	junction_3	237.799679352181	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCACTTTGGTTTATCA	-19	True	NA	-20	True	AATAAA	-17	NA	16353469	16342536	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_16342942_16344596_16344712_16348615_16348686_16349930_16350030_16353026
H1_mix_00037191	chr17	-	7593	6	FSM	ENSG00000141040.15	ENST00000395825.4	7639	6	0	46	0	-46	multi-exon	FALSE	canonical	3	58	junction_5	11.3947356265953	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTTAGAACACTATAACCAT	-9	True	NA	NA	False	NA	NA	NA	16569204	16546999	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_16553427_16563145_16563233_16563698_16563826_16566524_16566623_16567328_16567930_16568951
H1_mix_00037192	chr17	-	3373	6	FSM	ENSG00000141040.15	ENST00000395824.5	3373	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	31.707412382596	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAGTATAAATGGATCTG	26	False	NA	NA	False	NA	NA	NA	16569169	16551386	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_16553427_16563145_16563233_16563698_16563826_16566524_16566623_16567328_16567930_16568749
H1_mix_00037193	chr17	-	581	1	FSM	ENSG00000235554.1	ENST00000414124.1	1034	1	442	11	442	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	241	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGGGATTAACTCAGAACT	581	False	NA	NA	False	NA	NA	NA	16617439	16616858	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_16616900_16617400
H1_mix_00037195	chr17	-	576	1	FSM	ENSG00000226478.3	ENST00000413731.1	1126	1	1041	-491	1041	491	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAAGTGTGCTGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	16745720	16745144	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_16745100_16745700
H1_mix_00037196	chr17	-	546	1	FSM	ENSG00000240505.9	ENST00000579009.1	1978	1	1432	0	1432	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCATTGTGGTTGGGTCT	756	False	NA	-26	True	AATAAA	-24	NA	16939630	16939084	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_16939100_16939600
H1_mix_00037197	chr17	-	3680	14	FSM	ENSG00000154803.13	ENST00000285071.9	3667	14	0	-13	0	13	multi-exon	FALSE	canonical	2	13	junction_1	10.9965029406206	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTATTGGTTTGATGCCT	-9	True	NA	3	True	AATAAA	-30	NA	17237168	17212198	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_17213857_17214984_17215091_17215184_17215317_17216379_17216504_17217068_17217183_17219018_17219210_17221536_17221629_17222500_17222662_17223921_17224144_17226175_17226323_17227888_17228162_17231793_17231883_17232787_17232902_17236911
H1_mix_00037198	chr17	-	3009	8	FSM	ENSG00000154803.13	ENST00000389169.9	1692	8	0	-1317	0	-287	multi-exon	FALSE	canonical	2	24	junction_4	8.34461820943442	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGCTAAAACAAAAGTGGAC	20	True	NA	NA	False	NA	NA	NA	17237139	17219853	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_17221629_17222500_17222662_17223921_17224144_17226175_17226323_17227888_17228162_17231793_17231883_17232787_17232902_17236911
H1_mix_00037199	chr17	-	1814	12	FSM	ENSG00000141030.13	ENST00000268717.10	1814	12	0	0	0	0	multi-exon	TRUE	canonical	3	648	junction_9	78.6130811565456	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGGCTCACACCTGTAAT	-3	True	NA	NA	False	AATAAA	-24	NA	17281246	17246615	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_17247152_17247479_17247561_17248925_17249040_17254858_17254946_17260300_17260475_17261965_17262107_17264801_17264982_17267884_17267978_17270757_17270808_17270895_17271009_17276034_17276165_17281131
H1_mix_00037200	chr17	-	740	2	FSM	ENSG00000141030.13	ENST00000486032.1	725	2	0	-15	0	0	multi-exon	FALSE	canonical	3	823	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTCTTCTGTATCACTT	NA	False	NA	-16	True	ATTAAA	-34	NA	17247887	17246819	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_17247152_17247479
H1_mix_00037201	chr17	-	1625	12	FSM	ENSG00000141030.13	ENST00000578317.5	1625	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	286.034413926739	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTGCTTGAACATTAATG	108	False	NA	32	True	ATTAAA	-17	NA	17281191	17246836	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_17247152_17247479_17247561_17248925_17249040_17254858_17254946_17260300_17260475_17261965_17262107_17264801_17264982_17267884_17268046_17270757_17270808_17270895_17271009_17276034_17276184_17281131
H1_mix_00037202	chr17	-	755	6	FSM	ENSG00000141030.13	ENST00000577210.5	752	6	0	-3	0	0	multi-exon	FALSE	canonical	3	14	junction_4	351.917944981497	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAGGAAAGTGCCACCTT	113	False	NA	NA	False	NA	NA	NA	17281186	17260301	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_17260475_17261965_17262107_17264801_17264982_17267884_17267978_17270895_17271009_17281131
H1_mix_00037203	chr17	-	809	7	FSM	ENSG00000141030.13	ENST00000492672.5	809	7	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_6	257.464344888547	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACATCTCAAATTGTGGGT	-3	True	NA	NA	False	NA	NA	NA	17281246	17261997	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_17262107_17264801_17264982_17267884_17267978_17270757_17270808_17270895_17271009_17276034_17276184_17281131
H1_mix_00037204	chr17	-	742	1	FSM	ENSG00000215030.5	ENST00000392730.2	636	1	-54	-52	-54	52	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTACATACAGCTTTCCA	NA	False	NA	NA	False	AATAAA	-28	NA	17384066	17383324	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_17383300_17384100
H1_mix_00037205	chr17	-	1745	2	FSM	ENSG00000108551.5	ENST00000225688.4	1748	2	0	3	0	-3	multi-exon	FALSE	canonical	3	23	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCGGTTTTTTTTTTTTT	-1	True	NA	-3	True	AATAAA	-16	NA	17496395	17494439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_17495685_17495895
H1_mix_00037206	chr17	-	673	5	FSM	ENSG00000133027.18	ENST00000490392.5	673	5	0	0	0	0	multi-exon	FALSE	canonical	1	16	junction_4	220.691385196613	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTCCAGCCTCTGTC	3271	False	NA	-10	True	AATAAA	-17	NA	17519080	17505562	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_17505849_17506226_17506302_17509433_17509546_17512508_17512655_17519026
H1_mix_00037207	chr17	-	1021	7	FSM	ENSG00000133027.18	ENST00000255389.10	1021	7	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_6	38.4812364088728	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTCCAGCCTCTGTC	-18	True	NA	-10	True	AATAAA	-17	NA	17591708	17505562	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_17505849_17506226_17506302_17509433_17509546_17512508_17512655_17522279_17522396_17576919_17577028_17591530
H1_mix_00037210	chr17	-	4901	19	FSM	ENSG00000072310.18	ENST00000261646.11	4901	19	0	0	0	0	multi-exon	TRUE	canonical	3	206	junction_14	26.7162155411186	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCAGTGTGAAGCAATAT	-3	True	NA	74	True	AATAAA	-31	NA	17836986	17811333	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_17812852_17813367_17813480_17813568_17813770_17814244_17814411_17814614_17814748_17814834_17814945_17815220_17815330_17815859_17816029_17816206_17816374_17816456_17816719_17816957_17817137_17817255_17817458_17817695_17817917_17818259_17818375_17819012_17819235_17819319_17819455_17819537_17819726_17820089_17820522_17836726
H1_mix_00037213	chr17	-	477	2	FSM	ENSG00000072310.18	ENST00000487401.1	477	2	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCCAGCCCCATGCTCT	5273	False	NA	NA	False	NA	NA	NA	17818345	17817525	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_17817917_17818259
H1_mix_00037215	chr17	-	5735	15	FSM	ENSG00000175662.18	ENST00000379504.8	5735	15	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_10	5.20792175244519	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGCCTGTGTGGTCTGTT	-5	True	NA	NA	False	AATAAA	-17	NA	17972400	17843510	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_17847784_17848822_17848860_17850892_17850953_17861475_17861552_17862730_17862849_17866295_17866420_17866875_17866925_17869339_17869474_17879626_17879744_17882704_17882864_17884633_17884769_17893660_17893811_17898595_17898675_17907446_17907532_17972261
H1_mix_00037218	chr17	-	4181	30	FSM	ENSG00000177731.16	ENST00000327031.9	4181	30	0	0	0	0	multi-exon	FALSE	canonical	3	526	junction_19	152.736870873204	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCGCTAATTTTAACAAAA	-8	True	NA	NA	False	ATTAAA	-24	NA	18258738	18244814	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_18245273_18245353_18245420_18245554_18245661_18245743_18245851_18245933_18246063_18246161_18246223_18246307_18246463_18246593_18246829_18246912_18247053_18247168_18247358_18247656_18247849_18247928_18248034_18248549_18248722_18248799_18248884_18249126_18249202_18249325_18249409_18250837_18251018_18251264_18251478_18251679_18251817_18251998_18252147_18252471_18252557_18253300_18253459_18253543_18253720_18254078_18254183_18254520_18254683_18254768_18254855_18255182_18255264_18256525_18256598_18256908_18257020_18258627
H1_mix_00037219	chr17	-	947	4	FSM	ENSG00000177731.16	ENST00000577398.6	926	4	0	-21	0	0	multi-exon	FALSE	canonical	3	1161	junction_3	69.0716214438961	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCGCTAATTTTAACAAAA	1353	False	NA	NA	False	ATTAAA	-24	NA	18246062	18244814	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_18245420_18245554_18245661_18245743_18245851_18245933
H1_mix_00037220	chr17	-	3889	30	NIC	ENSG00000177731.16	novel	4181	30	NA	NA	5	-25	combination_of_known_junctions	FALSE	canonical	3	462	junction_19	160.279363722209	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTGCTAGCAAAGAATGT	12	True	NA	NA	False	NA	NA	NA	18258718	18245083	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_18245273_18245353_18245420_18245554_18245661_18245743_18245851_18245933_18246063_18246161_18246223_18246307_18246463_18246593_18246829_18246912_18247053_18247168_18247358_18247656_18247849_18247928_18248034_18248549_18248722_18248799_18248884_18249126_18249202_18249325_18249409_18250837_18251018_18251264_18251478_18251679_18251814_18251998_18252147_18252471_18252557_18253300_18253459_18253543_18253720_18254078_18254183_18254520_18254683_18254768_18254855_18255182_18255264_18256525_18256598_18256908_18257020_18258627
H1_mix_00037228	chr17	-	503	3	FSM	ENSG00000177302.15	ENST00000493648.1	503	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTGGAATTTCTAAGTC	NA	False	NA	-8	True	ATTAAA	-16	NA	18274958	18271427	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_18271674_18273243_18273337_18274794
H1_mix_00037229	chr17	-	6847	19	FSM	ENSG00000177302.15	ENST00000321105.10	6596	19	-251	0	-238	0	multi-exon	FALSE	canonical	3	99	junction_4	18.1053160462833	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTGGAATTTCTAAGTC	NA	False	NA	-8	True	ATTAAA	-16	NA	18315245	18271427	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_18274981_18277674_18278358_18280535_18280659_18282697_18282842_18285141_18285308_18285406_18285521_18290556_18290687_18290841_18291028_18292644_18292853_18294702_18294786_18299558_18299634_18301884_18301986_18302263_18302435_18302579_18302724_18305111_18305221_18306890_18306967_18308350_18308425_18308881_18308942_18314598
H1_mix_00037234	chr17	-	2533	12	FSM	ENSG00000176974.21	ENST00000316694.8	2527	12	7	-13	-1	0	multi-exon	FALSE	canonical	3	246	junction_4	35.8234883009679	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTTTGGCATTGACTCT	-12	True	NA	3	True	AATAAA	-32	NA	18363543	18327859	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_18328920_18329277_18329389_18330554_18330672_18333165_18333289_18335558_18335676_18340042_18340256_18340731_18340814_18347495_18347657_18348324_18348441_18353671_18353818_18355885_18356001_18363371
H1_mix_00037235	chr17	-	2155	10	NIC	ENSG00000176974.21	novel	2527	12	NA	NA	33	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_3	93.7195711934885	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTCTCATACTATGTGTT	2	True	NA	-10	True	AATAAA	-19	NA	18363418	18327872	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_18328920_18329277_18329389_18330554_18330672_18340042_18340256_18340731_18340814_18347495_18347657_18348324_18348441_18353671_18353818_18355885_18356001_18363371
H1_mix_00037236	chr17	-	1656	11	FSM	ENSG00000176974.21	ENST00000354098.7	1656	11	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_4	79.5537554110427	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACCTGGCTTTCTCACAG	80	False	NA	-9	True	ATTAAA	-12	NA	18363451	18328527	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_18328920_18329277_18329389_18330554_18330672_18333165_18333289_18340042_18340256_18340731_18340814_18347495_18347657_18348324_18348441_18353671_18353818_18355885_18356001_18363371
H1_mix_00037238	chr17	-	3021	1	ISM	ENSG00000249459.11	ENST00000285274.9	5145	4	19782	997	19400	-997	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATTCATCAAGAAGTCAG	NA	False	NA	NA	False	NA	NA	NA	18662446	18659425	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_18659400_18662400
H1_mix_00037239	chr17	-	7630	3	ISM	ENSG00000240445.6	ENST00000395675.7	5859	4	310	-1724	-186	1724	3prime_fragment	FALSE	canonical	3	25	junction_2	2	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAGAAGTATGGCATT	234	False	NA	NA	False	AATAAA	-35	NA	18682004	18665904	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_18673056_18680740_18680830_18681614
H1_mix_00037240	chr17	-	5859	4	FSM	ENSG00000240445.6	ENST00000395675.7	5859	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	3.2659863237109	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTTTCCTTTATTGCT	NA	False	NA	1	True	ATTAAA	-16	NA	18682314	18667628	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_18673056_18680740_18680830_18681614_18681847_18682203
H1_mix_00037242	chr17	-	5309	6	FSM	ENSG00000188522.15	ENST00000388995.11	5226	6	-83	0	-83	0	multi-exon	FALSE	canonical	3	74	junction_5	20.7980768341691	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGTTGTTATTGAATCT	NA	False	NA	0	True	AATAAA	-30	NA	19004847	18968788	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_18971749_18977583_18978851_18979548_18979674_18988246_18988415_19003519_19004170_19004708
H1_mix_00037244	chr17	-	784	1	FSM	ENSG00000262074.7	ENST00000571722.3	791	1	95	-88	95	88	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGAAGTTCTGCGATTACA	88	False	NA	NA	False	NA	NA	NA	19064041	19063257	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19063300_19064000
H1_mix_00037246	chr17	-	461	3	FSM	ENSG00000197665.7	ENST00000399087.2	553	3	21	71	21	-71	multi-exon	FALSE	canonical	1	2	junction_2	0.5	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTAGAGCCCCTTCCAGC	NA	False	NA	NA	False	NA	NA	NA	19158872	19155797	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19156006_19158461_19158621_19158778
H1_mix_00037249	chr17	-	816	6	FSM	ENSG00000108641.20	ENST00000440841.1	601	6	-209	-6	-18	2	multi-exon	FALSE	canonical	3	21	junction_1	89.515585235198	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATGAGTCAGACACCTTG	-8	True	NA	0	True	ATTAAA	-25	NA	19362751	19346943	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19347174_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362506
H1_mix_00037251	chr17	-	1263	6	FSM	ENSG00000166482.12	ENST00000395592.6	1932	6	-31	700	-31	273	multi-exon	FALSE	canonical	2	4	junction_5	34.1970758983864	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGAGCCACTCTCCCAGCT	NA	False	NA	NA	False	NA	NA	NA	19387221	19384141	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19384710_19385098_19385282_19385357_19385455_19386309_19386465_19386759_19386839_19387040
H1_mix_00037252	chr17	-	1823	6	FSM	ENSG00000166482.12	ENST00000299610.5	1820	6	0	-3	0	0	multi-exon	FALSE	canonical	3	66	junction_5	10.6282642044691	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCAGGGGGAGTTGGGG	-7	True	NA	-12	True	AATAAA	-20	NA	19387190	19383441	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19384710_19385098_19385282_19385357_19385455_19386309_19386465_19386759_19386839_19387149
H1_mix_00037254	chr17	-	9149	27	FSM	ENSG00000083290.20	ENST00000395544.9	9149	27	0	0	0	0	multi-exon	TRUE	canonical	3	42	junction_16	10.2467342177973	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTAAGTGTTCCTGTTTG	0	True	NA	-4	True	AATAAA	-22	NA	19867936	19770829	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19776408_19777580_19777717_19780471_19780630_19780985_19781105_19781888_19782068_19783696_19783906_19785936_19786087_19795621_19795726_19796094_19796283_19797395_19797683_19799494_19799576_19801776_19801923_19804692_19804831_19810377_19810439_19816748_19816921_19825093_19825183_19826138_19826187_19838500_19838584_19841488_19841548_19843120_19843223_19845303_19845378_19846736_19846911_19849368_19849406_19849741_19849775_19864802_19864845_19865735_19865829_19867327
H1_mix_00037255	chr17	-	3908	28	FSM	ENSG00000083290.20	ENST00000361658.6	3908	28	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	12.966031382874	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTAAGTGTTCCTGTTTG	0	True	NA	-4	True	AATAAA	-22	NA	19867936	19770829	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19771068_19776308_19776408_19777580_19777717_19780471_19780630_19780985_19781105_19781888_19782068_19783696_19783906_19785936_19786087_19795621_19795726_19796094_19796283_19797395_19797683_19799494_19799576_19801776_19801923_19804692_19804831_19810377_19810439_19816748_19816921_19825093_19825183_19826138_19826187_19838500_19838584_19841488_19841548_19843120_19843223_19845303_19845378_19846736_19846911_19849368_19849406_19849741_19849775_19864802_19864845_19865735_19865829_19867327
H1_mix_00037258	chr17	-	4063	15	FSM	ENSG00000108599.15	ENST00000225737.11	4063	15	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_11	21.0203982563876	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGACTCGGCTACTTTT	-7	True	NA	NA	False	TATAAA	-16	NA	19977828	19904301	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19906233_19909180_19909277_19909925_19909979_19920035_19920119_19924407_19924518_19931804_19931979_19936285_19936431_19939712_19939850_19940886_19941011_19941825_19941911_19947406_19947506_19958013_19958572_19962839_19963023_19968413_19968462_19977591
H1_mix_00037260	chr17	-	1815	14	FSM	ENSG00000108599.15	ENST00000395536.7	1815	14	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	38.7480100653397	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAAAACTTGAGATAAAGG	142	False	NA	NA	False	NA	NA	NA	19977679	19906226	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19906233_19909180_19909277_19909925_19909979_19920035_19920119_19924407_19924518_19936285_19936431_19939712_19939850_19940886_19941011_19941825_19941911_19947406_19947506_19958013_19958572_19962839_19963023_19968413_19968462_19977591
H1_mix_00037261	chr17	-	260	1	FSM	ENSG00000266126.1	ENST00000583067.1	366	1	74	32	74	-32	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGTCATTTTATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	19929663	19929403	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19929400_19929700
H1_mix_00037262	chr17	-	379	1	FSM	ENSG00000261033.1	ENST00000564549.1	1184	1	796	9	796	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAATAAACTTGTCTTTTT	NA	False	NA	NA	False	AATAAA	-27	NA	20008438	20008059	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_20008100_20008400
H1_mix_00037263	chr17	-	289	1	Genic_Genomic	ENSG00000214832.5	novel	NA	NA	NA	NA	819	83	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGCCATGGTGTCGAGTG	NA	False	NA	NA	False	NA	NA	NA	20375574	20375285	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr17_-_20375300_20375600
H1_mix_00037264	chr17	-	701	1	FSM	ENSG00000229586.2	ENST00000436471.2	2662	1	1517	444	1517	-444	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTATATTTACCCTATG	NA	False	NA	NA	False	NA	NA	NA	20482474	20481773	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_20481800_20482500
H1_mix_00037265	chr17	-	1075	1	FSM	ENSG00000260907.1	ENST00000563569.1	840	1	-237	2	-237	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	203	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGTTTGTAGTCATTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	20531118	20530043	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_20530000_20531100
H1_mix_00037266	chr17	-	762	1	FSM	ENSG00000265916.1	ENST00000584274.1	634	1	274	-402	274	402	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGGAGTTCGAGACCTGC	NA	False	NA	NA	False	NA	NA	NA	20532607	20531845	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_20531800_20532600
H1_mix_00037268	chr17	-	5679	13	FSM	ENSG00000124422.12	ENST00000261497.9	5189	13	0	-490	0	490	multi-exon	FALSE	canonical	3	754	junction_10	65.9564250092438	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCCCAGCCGCCCCCAC	-27	True	NA	NA	False	NA	NA	NA	21043011	20999105	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_21003074_21004201_21004352_21004927_21004991_21006895_21006988_21007869_21007997_21011150_21011310_21012829_21012936_21015751_21015900_21017941_21018112_21019083_21019186_21021112_21021227_21028541_21028675_21042664
H1_mix_00037269	chr17	-	1829	13	FSM	ENSG00000124422.12	ENST00000579645.5	1906	13	77	0	77	0	multi-exon	FALSE	canonical	3	31	junction_12	234.301918235615	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCCCTGGCCCCCCCCTC	55	False	NA	NA	False	AAAACA	-33	NA	21043683	21002971	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_21003074_21004201_21004352_21004927_21004991_21006895_21006988_21007869_21007997_21011150_21011310_21012829_21012936_21015751_21015900_21017941_21018112_21019083_21019186_21021112_21021227_21028541_21028675_21043320
H1_mix_00037270	chr17	-	958	2	FSM	ENSG00000178307.10	ENST00000317635.6	958	2	0	0	0	0	multi-exon	FALSE	canonical	3	503	junction_1	0	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCGCTGTTCTCTCTTTC	6	True	NA	-7	True	ATTAAA	-17	NA	21214161	21197953	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_21198841_21214090
H1_mix_00037271	chr17	-	1246	3	FSM	ENSG00000178307.10	ENST00000577419.5	1246	3	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	16	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTCCCGCTGTTCTCTC	6	True	NA	-11	True	ATTAAA	-13	NA	21214161	21197957	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_21198841_21210935_21211228_21214090
H1_mix_00037272	chr17	-	819	3	FSM	ENSG00000178307.10	ENST00000583264.1	819	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	46.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTCTGTGAGGCAGCAGA	4	True	NA	NA	False	NA	NA	NA	21214163	21198255	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_21198841_21211066_21211228_21214090
H1_mix_00037273	chr17	-	4938	3	FSM	ENSG00000274180.1	ENST00000611551.1	4931	3	0	-7	0	7	multi-exon	FALSE	canonical	3	21	junction_1	2	2096	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTTTCTGTCCATGTT	-3	True	NA	4	True	ATTAAA	-31	NA	21253410	21238862	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_21243430_21244105_21244225_21253158
H1_mix_00037274	chr17	-	8849	2	FSM	ENSG00000212719.14	ENST00000647872.1	7914	2	11	-946	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTTGCCTCGAATTCTT	-8	True	NA	-3	True	AATAAA	-16	NA	21551669	21527363	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_21535539_21550995
H1_mix_00037275	chr17	-	2532	3	FSM	ENSG00000212719.14	ENST00000659749.1	2519	3	0	-13	0	0	multi-exon	FALSE	canonical	1	3	junction_1	22.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTTGCCTCGAATTCTT	-8	True	NA	-3	True	AATAAA	-16	NA	21551669	21527363	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_21529111_21535427_21535539_21550995
H1_mix_00037276	chr17	-	1324	1	FSM	ENSG00000265683.1	ENST00000582878.1	727	1	-482	-115	-482	115	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAGATATCACCTCACAC	742	False	NA	NA	False	AATAAA	-28	NA	27353066	27351742	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_27351700_27353100
H1_mix_00037277	chr17	-	2297	4	ISM	ENSG00000232859.10	ENST00000379103.7	1685	5	8456	44	-568	0	3prime_fragment	FALSE	canonical	2	8	junction_3	15.084944665313	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGTGTGTCTTCTCAACT	9491	False	NA	-5	True	AGTAAA	-18	NA	27883865	27878357	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_27879491_27880273_27880367_27882568_27882713_27882938
H1_mix_00037278	chr17	-	1422	4	NNC	ENSG00000232859.10	novel	1419	4	NA	NA	3174	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	16.9705627484771	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGTGTGTCTTCTCAACT	4209	False	NA	-5	True	AGTAAA	-18	NA	27889147	27878357	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_27879491_27880273_27880367_27882568_27882713_27889095
H1_mix_00037279	chr17	-	1419	4	FSM	ENSG00000232859.10	ENST00000379102.8	1419	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	12.2565175405668	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGTGTGTCTTCTCAACT	-9	True	NA	-5	True	AGTAAA	-18	NA	27893365	27878357	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_27879491_27880273_27880367_27882568_27882713_27893316
H1_mix_00037281	chr17	-	1074	6	FSM	ENSG00000109083.14	ENST00000585089.5	1071	6	0	-3	0	0	multi-exon	FALSE	canonical	3	70	junction_5	53.3906358830835	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATGTACCTTTTTTCCT	16	True	NA	-14	True	AATAAA	-18	NA	28335449	28328325	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28328734_28329172_28329277_28330442_28330529_28331858_28331988_28332145_28332383_28335339
H1_mix_00037282	chr17	-	860	5	FSM	ENSG00000109083.14	ENST00000395418.8	860	5	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_4	28.2001773044071	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATGTACCTTTTTTCCT	-7	True	NA	-14	True	AATAAA	-18	NA	28335472	28328325	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28328734_28329172_28329277_28330442_28330529_28331858_28331988_28335339
H1_mix_00037284	chr17	-	1104	3	FSM	ENSG00000109083.14	ENST00000582797.5	1104	3	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_2	33	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTGCTGGGATTGCAGG	-5	True	NA	NA	False	NA	NA	NA	28335470	28329684	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28330529_28331858_28331988_28335339
H1_mix_00037286	chr17	-	2670	11	FSM	ENSG00000004142.12	ENST00000540200.6	2670	11	0	0	0	0	multi-exon	FALSE	canonical	3	803	junction_7	30.6	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAGTGAGTTCAATGTTA	-26	True	NA	-13	True	ATTAAA	-14	NA	28357527	28346632	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28348232_28349082_28349163_28350437_28350564_28350765_28350793_28351663_28351801_28352911_28353020_28353240_28353317_28353694_28353792_28354487_28354586_28355794_28355877_28357287
H1_mix_00037287	chr17	-	1635	8	FSM	ENSG00000109072.14	ENST00000226218.9	1626	8	0	-9	0	9	multi-exon	TRUE	canonical	3	13	junction_3	4.05069910821652	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTCTGACTGGGGTAG	-9	True	NA	5	True	AATAAA	-26	NA	28370307	28367274	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28367482_28367714_28368060_28368520_28368674_28368871_28369029_28369288_28369429_28369506_28369852_28369926_28370047_28370139
H1_mix_00037288	chr17	-	6492	5	FSM	ENSG00000076351.13	ENST00000612814.5	6492	5	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_3	3.49106001094224	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCTGAGTTCTGTGAGT	-22	True	NA	-8	True	AATAAA	-22	NA	28406212	28394641	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28399714_28400609_28400767_28402237_28402322_28404615_28405469_28405886
H1_mix_00037289	chr17	-	1384	5	FSM	ENSG00000109103.12	ENST00000335765.9	1379	5	0	-5	0	5	multi-exon	FALSE	canonical	3	324	junction_1	31.4880929876676	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGCCAGCCTCTGTGTG	-15	True	NA	-3	True	AATAAA	-23	NA	28552624	28546702	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28547410_28547676_28547850_28547998_28548102_28548591_28548706_28552337
H1_mix_00037290	chr17	-	1691	4	FSM	ENSG00000109103.12	ENST00000301032.8	1653	4	-36	-2	-36	2	multi-exon	FALSE	canonical	3	373	junction_1	15.9652400197707	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTGGCCAGCCTCTGT	5891	False	NA	-6	True	AATAAA	-20	NA	28552667	28546705	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28547850_28547998_28548102_28548591_28548706_28552337
H1_mix_00037291	chr17	-	2521	12	FSM	ENSG00000087111.21	ENST00000308360.8	2529	12	14	-6	0	2	multi-exon	FALSE	canonical	3	264	junction_11	24.4729569082837	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGCTCTACTCTTTCTGC	10	True	NA	1	True	AATAAA	-35	NA	28571510	28553380	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28554496_28554850_28555062_28556165_28556267_28556826_28556973_28558475_28558591_28560048_28560192_28561421_28561630_28563430_28563523_28563817_28563908_28570851_28570964_28571048_28571189_28571462
H1_mix_00037292	chr17	-	2795	11	FSM	ENSG00000087111.21	ENST00000395346.6	2815	11	26	-6	0	2	multi-exon	FALSE	canonical	3	276	junction_7	21.6168915434204	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGCTCTACTCTTTCTGC	10	True	NA	1	True	AATAAA	-35	NA	28571510	28553380	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28554496_28554850_28555062_28556165_28556267_28556826_28556973_28558475_28558591_28560048_28560192_28561421_28561630_28563430_28563523_28563817_28563908_28570851_28570964_28571048
H1_mix_00037293	chr17	-	516	3	FSM	ENSG00000087111.21	ENST00000577620.5	608	3	92	0	92	0	multi-exon	FALSE	canonical	3	291	junction_1	10.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAACCCAGTGGAGTCCC	9815	False	NA	NA	False	NA	NA	NA	28561705	28558501	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28558591_28560048_28560192_28561421
H1_mix_00037295	chr17	-	1615	9	FSM	ENSG00000109107.14	ENST00000226253.9	1608	9	0	-7	0	2	multi-exon	FALSE	canonical	3	129	junction_8	21.9598354957409	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTGTCTGTTTTACACA	3	True	NA	2	True	AATAAA	-21	NA	28576895	28573112	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28573622_28573734_28573935_28574066_28574242_28574493_28574578_28574695_28574857_28574951_28575007_28575122_28575335_28575420_28575545_28576800
H1_mix_00037296	chr17	-	1720	10	FSM	ENSG00000109107.14	ENST00000395321.6	1722	10	6	-4	6	4	multi-exon	TRUE	canonical	3	27	junction_9	62.1118067939573	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTCTGTTTTACACATC	7649	False	NA	4	True	AATAAA	-23	NA	28576942	28573110	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28573622_28573734_28573935_28574066_28574242_28574493_28574578_28574695_28574857_28574951_28575007_28575122_28575335_28575420_28575545_28575964_28576021_28576800
H1_mix_00037299	chr17	-	651	4	FSM	ENSG00000076382.17	ENST00000577259.1	651	4	0	0	0	0	multi-exon	FALSE	canonical	3	642	junction_2	18.7853370714738	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAAGTCCAGAAGGCAAAA	965	False	NA	NA	False	NA	NA	NA	28583626	28579208	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28579253_28579364_28579486_28579750_28580121_28583510
H1_mix_00037301	chr17	-	870	3	FSM	ENSG00000076382.17	ENST00000536674.2	870	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	329	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGTGTCAATCATGTGGAC	20	True	NA	NA	False	NA	NA	NA	28598999	28592471	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28593067_28598464_28598636_28598895
H1_mix_00037302	chr17	-	632	5	FSM	ENSG00000167524.16	ENST00000527918.6	632	5	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	7.39509972887452	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTTTGGTCGGCTGTTG	372	False	NA	NA	False	NA	NA	NA	28613820	28612338	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28612367_28612617_28612688_28613077_28613147_28613261_28613346_28613439
H1_mix_00037303	chr17	-	8050	39	Fusion	ENSG00000007202.15_ENSG00000258472.9	novel	6852	39	NA	NA	0	625	multi-exon	FALSE	canonical	3	11	junction_6	72.9801513637427	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAATTTTGCCTCATGCTC	-10	True	NA	NA	False	GGGGCT	-21	NA	28645155	28613820	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr17_-_28615247_28615663_28615799_28616095_28616198_28616378_28616510_28616617_28616754_28616888_28616996_28617227_28617319_28618790_28618972_28619653_28619776_28619859_28620016_28620508_28620631_28620987_28621171_28621398_28621499_28623759_28623967_28624232_28624391_28628264_28628560_28631478_28631682_28631819_28631920_28632048_28632240_28632941_28633163_28633282_28633402_28633548_28633752_28633894_28634087_28634516_28635610_28636964_28637171_28637835_28638095_28638251_28638416_28638523_28638643_28639314_28639461_28639574_28639643_28639900_28640026_28640559_28640684_28641888_28642079_28642274_28642336_28642868_28642988_28643163_28643312_28643609_28643660_28644057_28644188_28644988
H1_mix_00037304	chr17	-	8053	39	FSM	ENSG00000007202.15_ENSG00000258472.9	ENST00000528896.7	7428	39	0	-625	0	625	multi-exon	FALSE	canonical	0	0	junction_6	74.1777503208292	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAATTTTGCCTCATGCTC	-13	True	NA	NA	False	GGGGCT	-21	NA	28645158	28613820	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28615247_28615663_28615799_28616095_28616198_28616378_28616510_28616617_28616754_28616888_28617000_28617231_28617319_28618790_28618972_28619653_28619776_28619859_28620016_28620508_28620631_28620987_28621171_28621398_28621499_28623759_28623967_28624232_28624391_28628264_28628560_28631478_28631682_28631819_28631920_28632048_28632240_28632941_28633163_28633282_28633402_28633548_28633752_28633894_28634087_28634516_28635610_28636964_28637171_28637835_28638095_28638251_28638416_28638523_28638643_28639314_28639461_28639574_28639643_28639900_28640026_28640559_28640684_28641888_28642079_28642274_28642336_28642868_28642988_28643163_28643312_28643609_28643660_28644057_28644188_28644988
H1_mix_00037306	chr17	-	1582	11	FSM	ENSG00000007202.15	ENST00000580882.5	1582	11	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_3	28.1211664053965	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAAATGATAAGGAATGTC	-10	True	NA	NA	False	AATAAA	-17	NA	28645155	28639060	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28639461_28639574_28639643_28639900_28640026_28640559_28640684_28641888_28642079_28642274_28642336_28642868_28642988_28643163_28643312_28643609_28643660_28644057_28644188_28644988
H1_mix_00037311	chr17	-	1309	3	FSM	ENSG00000132581.10	ENST00000247020.9	1309	3	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	11	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGTATCTGTTACTGC	3	True	NA	NA	False	AATAAA	-17	NA	28661906	28648345	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28649277_28655286_28655484_28661725
H1_mix_00037313	chr17	-	681	3	FSM	ENSG00000132581.10	ENST00000588472.6	681	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	13	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATTAGTACTGATAAAACA	27	True	NA	NA	False	NA	NA	NA	28662132	28648740	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28649138_28655286_28655484_28662045
H1_mix_00037314	chr17	-	735	4	FSM	ENSG00000132581.10	ENST00000591903.1	735	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	135.381764733003	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGATCCCTGCCACAAGTTC	340	False	NA	NA	False	NA	NA	NA	28661819	28648924	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28649277_28651485_28651578_28655286_28655484_28661725
H1_mix_00037317	chr17	-	2721	4	ISM	ENSG00000167525.15	ENST00000674362.1	1657	5	1009	-85	1009	1	3prime_fragment	FALSE	canonical	3	5	junction_3	24.5356882927706	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGCCACTGTGCCTGGC	9385	False	NA	-4	True	AATAAA	-19	NA	28709095	28703195	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_28704213_28704306_28704617_28704707_28704844_28707837
H1_mix_00037318	chr17	-	1993	4	FSM	ENSG00000167525.15	ENST00000301039.6	1566	4	-426	-1	-392	1	multi-exon	FALSE	canonical	3	12	junction_3	20.4993224820291	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGCCACTGTGCCTGGC	8563	False	NA	-4	True	AATAAA	-19	NA	28712280	28703195	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28704213_28704306_28704436_28704707_28704844_28711569
H1_mix_00037320	chr17	-	1124	3	FSM	ENSG00000109113.20	ENST00000474704.1	1108	3	0	-16	0	1	multi-exon	FALSE	canonical	3	1355	junction_2	20.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGCTGGAGTTCTTTG	9962	False	NA	0	True	ATTAAA	-20	NA	28715718	28714282	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28715277_28715455_28715508_28715640
H1_mix_00037321	chr17	-	1598	10	FSM	ENSG00000109113.20	ENST00000395243.7	1597	10	0	-1	0	1	multi-exon	FALSE	canonical	3	213	junction_3	345.438851318146	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGCTGGAGTTCTTTG	5	True	NA	0	True	ATTAAA	-20	NA	28717748	28714282	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715218_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28716902_28716995_28717212
H1_mix_00037322	chr17	-	1742	10	FSM	ENSG00000109113.20	ENST00000395245.9	1741	10	0	-1	0	1	multi-exon	FALSE	canonical	3	985	junction_8	121.045446010992	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGCTGGAGTTCTTTG	0	True	NA	0	True	ATTAAA	-20	NA	28717868	28714282	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715194_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28716902_28716995_28717212
H1_mix_00037323	chr17	-	1186	11	FSM	ENSG00000109113.20	ENST00000450529.5	1184	11	0	-2	0	1	multi-exon	FALSE	canonical	3	118	junction_10	446.390871322432	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGCTGGAGTTCTTTG	13	True	NA	0	True	ATTAAA	-20	NA	28718166	28714282	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715218_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28716902_28716995_28717212_28717292_28718121
H1_mix_00037324	chr17	-	1295	10	FSM	ENSG00000109113.20	ENST00000415040.6	1293	10	0	-2	0	1	multi-exon	FALSE	canonical	3	72	junction_7	500.585163756218	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGCTGGAGTTCTTTG	-4	True	NA	0	True	ATTAAA	-20	NA	28718183	28714282	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715194_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28716902_28716995_28717212_28717426_28718121
H1_mix_00037325	chr17	-	1593	11	FSM	ENSG00000109113.20	ENST00000301043.10	1592	11	0	-1	0	1	multi-exon	FALSE	canonical	3	119	junction_10	356.879825711681	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGCTGGAGTTCTTTG	6	True	NA	0	True	ATTAAA	-20	NA	28718415	28714282	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715194_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28716902_28716995_28717212_28717426_28718121
H1_mix_00037336	chr17	-	1042	4	FSM	ENSG00000160606.11	ENST00000292090.8	1042	4	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_3	2.94392028877595	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTGTCCTTTATTGGGC	-12	True	NA	1	True	AATGAA	-15	NA	28726233	28724347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28724894_28725303_28725387_28725480_28725564_28725903
H1_mix_00037337	chr17	-	695	4	FSM	ENSG00000160606.11	ENST00000580518.1	578	4	29	-146	29	0	multi-exon	FALSE	canonical	3	47	junction_3	108.677913528412	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGGGACTTAGCCCCAAG	31	False	NA	-104	True	NA	NA	NA	28727906	28724452	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28724894_28725303_28725387_28725480_28725564_28727818
H1_mix_00037338	chr17	-	4251	3	FSM	ENSG00000173065.14	ENST00000452648.8	4246	3	0	-5	0	5	multi-exon	FALSE	canonical	3	297	junction_2	31.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACCTTGTTCTATTCGTT	1	True	NA	-13	True	AGTAAA	-20	NA	28812435	28755974	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28759877_28766585_28766708_28812208
H1_mix_00037339	chr17	-	4174	4	FSM	ENSG00000173065.14	ENST00000581229.6	4169	4	0	-5	0	5	multi-exon	FALSE	canonical	3	11	junction_3	148.728686614998	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACCTTGTTCTATTCGTT	4	True	NA	-13	True	AGTAAA	-20	NA	28842783	28755974	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28759877_28766585_28766708_28790377_28790426_28842681
H1_mix_00037340	chr17	-	4015	3	FSM	ENSG00000173065.14	ENST00000582266.6	4010	3	0	-5	0	5	multi-exon	FALSE	canonical	3	76	junction_2	5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACCTTGTTCTATTCGTT	3	True	NA	-13	True	AGTAAA	-20	NA	28842784	28755974	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28759765_28766585_28766708_28842681
H1_mix_00037341	chr17	-	4167	4	FSM	ENSG00000173065.14	ENST00000577376.6	4162	4	0	-5	0	5	multi-exon	FALSE	canonical	3	47	junction_3	145.249976094854	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACCTTGTTCTATTCGTT	-3	True	NA	-13	True	AGTAAA	-20	NA	28842790	28755974	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28759877_28766585_28766708_28834292_28834327_28842681
H1_mix_00037342	chr17	-	4118	5	FSM	ENSG00000173065.14	ENST00000583522.6	4147	5	29	0	13	0	multi-exon	FALSE	canonical	3	11	junction_3	33.431833632034	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	-23	True	NA	-18	True	AGTAAA	-15	NA	28842810	28755979	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28759765_28766585_28766708_28790377_28790426_28834292_28834327_28842681
H1_mix_00037344	chr17	-	2619	12	NNC	ENSG00000132589.16	novel	2679	12	NA	NA	0	51240	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	390.488145448152	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTTGATCTTGATTTCT	20	True	NA	NA	False	NA	NA	NA	28897652	28828094	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_28828127_28879338_28880600_28880712_28880863_28881191_28881376_28881813_28882029_28882117_28882238_28882336_28882451_28882572_28882692_28883107_28883232_28884224_28884316_28888944_28889027_28897525
H1_mix_00037345	chr17	-	2668	11	FSM	ENSG00000132589.16	ENST00000394908.9	2668	11	0	0	0	0	multi-exon	FALSE	canonical	3	1222	junction_5	106.818584525353	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGCATTGTGTCTTCTG	-61	True	NA	-7	True	AATAAA	-17	NA	28897733	28879338	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28880600_28880712_28880863_28881191_28881376_28881813_28882029_28882117_28882238_28882336_28882451_28882572_28882692_28883107_28883232_28884224_28884316_28888944_28889027_28897525
H1_mix_00037346	chr17	-	2586	11	FSM	ENSG00000132589.16	ENST00000585169.5	2585	11	0	-1	0	-1	multi-exon	FALSE	canonical	3	29	junction_9	502.67866475513	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCTGCATTGTGTCTTCT	20	True	NA	-8	True	AATAAA	-16	NA	28897652	28879339	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28880600_28880712_28880863_28881191_28881376_28881813_28882029_28882117_28882238_28882336_28882451_28882572_28882692_28883107_28883232_28885856_28885948_28888944_28889027_28897525
H1_mix_00037351	chr17	-	2037	4	FSM	ENSG00000167536.14	ENST00000394901.7	2037	4	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_1	18.6607133363712	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGCTCACTCCTGCCTC	-19	True	NA	-9	True	AATAAA	-18	NA	28903071	28897780	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28898893_28900989_28901302_28901492_28901617_28902582
H1_mix_00037352	chr17	-	1929	5	FSM	ENSG00000167536.14	ENST00000378895.9	1929	5	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_4	32.7060774168961	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGCTCACTCCTGCCTC	-27	True	NA	-9	True	AATAAA	-18	NA	28903079	28897780	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28898893_28900989_28901302_28901492_28901617_28902582_28902702_28902817
H1_mix_00037355	chr17	-	5072	11	ISM	ENSG00000109118.14	ENST00000332830.9	4506	15	27868	3	297	0	3prime_fragment	FALSE	canonical	3	98	junction_8	12.0784932835184	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGTTTTCTGACTGTCT	2420	False	NA	-12	True	TATAAA	-16	NA	28923650	28905252	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_28906518_28906855_28906995_28907589_28907673_28908782_28908882_28910225_28910370_28911111_28911238_28912481_28913278_28913878_28914038_28917284_28917450_28919142_28919276_28921687
H1_mix_00037357	chr17	-	4199	17	FSM	ENSG00000063015.21	ENST00000317338.17	4206	17	3	4	3	-3	multi-exon	FALSE	canonical	3	17	junction_1	6.71286079104878	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCAATGGCCAGGTGAA	10	True	NA	NA	False	ATTAAA	-36	NA	29006030	28954908	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28955995_28956158_28956262_28956349_28956468_28956718_28956758_28957044_28957243_28957347_28957540_28957946_28958142_28959024_28959222_28959333_28959473_28959697_28959893_28960504_28960672_28960804_28960974_28963961_28964148_28969756_28969953_28979679_28979814_28981370_28982040_29005814
H1_mix_00037358	chr17	-	4183	17	FSM	ENSG00000063015.21	ENST00000360295.13	4306	17	115	8	3	-3	multi-exon	FALSE	canonical	3	14	junction_1	7.08403795514959	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCAATGGCCAGGTGAA	10	True	NA	NA	False	ATTAAA	-36	NA	29006030	28954908	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28955979_28956158_28956262_28956349_28956468_28956718_28956758_28957044_28957243_28957347_28957540_28957946_28958142_28959024_28959222_28959333_28959473_28959697_28959893_28960504_28960672_28960804_28960974_28963961_28964148_28969756_28969953_28979679_28979814_28981370_28982040_29005814
H1_mix_00037359	chr17	-	807	4	FSM	ENSG00000063015.21	ENST00000544224.2	807	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	6.12825877028341	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTACTTCTCCAGGTGAGT	NA	False	NA	NA	False	NA	NA	NA	28957813	28956363	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28956468_28956718_28956758_28957044_28957243_28957347
H1_mix_00037360	chr17	-	1480	2	ISM	ENSG00000063015.21	ENST00000442608.7	3805	16	-117	25645	3	774	5prime_fragment	FALSE	canonical	3	34	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGCACTTTGGGAGGCC	10	True	NA	14	True	AATAAA	-34	NA	29006030	28980775	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_28982040_29005814
H1_mix_00037361	chr17	-	9980	42	FSM	ENSG00000196535.18	ENST00000527372.7	9980	42	0	0	0	0	multi-exon	TRUE	canonical	3	43	junction_32	28.7968535527576	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTTCTTTTGTCTTTGT	6	True	NA	NA	False	AATAAA	-23	NA	29180398	29071121	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_29074915_29082315_29082439_29085603_29085649_29086437_29086578_29086935_29087122_29089960_29090099_29090531_29090616_29090809_29090927_29092342_29092457_29092854_29093002_29093322_29093428_29093979_29094091_29094649_29094851_29094935_29095060_29096760_29096916_29097222_29097351_29097787_29097900_29098104_29098225_29098355_29098446_29098825_29098970_29099633_29099763_29103598_29103665_29107079_29107190_29109857_29110102_29110435_29110623_29111423_29111584_29111721_29111864_29114010_29114098_29114906_29115100_29115350_29115442_29115663_29115841_29116443_29116456_29118044_29118190_29118376_29118441_29119334_29119436_29120615_29120759_29120997_29121212_29121546_29121724_29121850_29121958_29122165_29122254_29165941_29167022_29180312
H1_mix_00037363	chr17	-	7504	41	FSM	ENSG00000196535.18	ENST00000531253.5	7504	41	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	29.841414175605	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGCCAGTTTTCCTGCCTG	2	True	NA	-11	True	AATAAA	-19	NA	29180364	29073518	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_29074915_29082315_29082439_29086437_29086578_29086935_29087122_29089960_29090099_29090531_29090616_29090809_29090927_29092342_29092457_29092854_29093002_29093322_29093428_29093979_29094091_29094649_29094851_29094935_29095060_29096760_29096916_29097222_29097351_29097787_29097900_29098104_29098225_29098355_29098446_29098825_29098970_29099633_29099763_29103598_29103665_29107079_29107190_29109857_29110102_29110435_29110623_29111423_29111584_29111721_29111864_29114010_29114098_29114906_29115100_29115350_29115442_29115663_29115841_29116443_29116456_29118044_29118190_29118376_29118441_29119334_29119436_29120615_29120759_29120997_29121212_29121546_29121724_29121850_29121958_29122165_29122254_29165941_29167022_29180312
H1_mix_00037364	chr17	-	7571	41	NIC	ENSG00000196535.18	novel	9980	42	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_31	28.4850399332702	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGCCAGTTTTCCTGCCTG	6	True	NA	-11	True	AATAAA	-19	NA	29180398	29073518	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_29074915_29082315_29082439_29085603_29085649_29086437_29086578_29086935_29087122_29089960_29090099_29090531_29090616_29090809_29090927_29092342_29092457_29092854_29093002_29093322_29093428_29093979_29094091_29094649_29094851_29094935_29095060_29096760_29096916_29097222_29097351_29097787_29097900_29098104_29098225_29098355_29098446_29098825_29098970_29099633_29099763_29103598_29103665_29107079_29107190_29109857_29110102_29110435_29110623_29111423_29111584_29111721_29111864_29114010_29114098_29114906_29115100_29115350_29115442_29115663_29115841_29118044_29118190_29118376_29118441_29119334_29119436_29120615_29120759_29120997_29121212_29121546_29121724_29121850_29121958_29122165_29122254_29165941_29167022_29180312
H1_mix_00037368	chr17	-	1080	1	FSM	ENSG00000178082.6	ENST00000580812.1	1049	1	-25	-6	-25	6	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTCACATTAAACATTGCAA	8227	False	NA	NA	False	ATTAAA	-3	NA	29204499	29203419	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_29203400_29204500
H1_mix_00037369	chr17	-	10881	4	FSM	ENSG00000108256.9	ENST00000225388.9	10877	4	0	-4	0	4	multi-exon	FALSE	canonical	3	127	junction_3	10.3708994574027	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGTTATCTTTTGTGT	-1	True	NA	-9	True	AATAAA	-20	NA	29294148	29255834	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_29264592_29267497_29267531_29285991_29287717_29293782
H1_mix_00037370	chr17	-	341	1	FSM	ENSG00000239256.1	ENST00000492004.1	341	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTAATGAAAAGTCAATAAA	NA	False	NA	NA	False	NA	NA	NA	29340822	29340481	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_29340500_29340800
H1_mix_00037371	chr17	-	4981	2	FSM	ENSG00000168792.5	ENST00000307201.5	3492	2	-1493	4	-1493	-4	multi-exon	FALSE	canonical	2	6	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCTGCTCTACTGCCGG	3	True	NA	-22	True	AATAAA	-13	NA	29568530	29560550	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_29563087_29566085
H1_mix_00037372	chr17	-	3714	21	FSM	ENSG00000108262.16	ENST00000394869.7	3711	21	0	-3	0	3	multi-exon	FALSE	canonical	3	22	junction_14	113.002334046691	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCTGATGCTTAGAGAAT	-5	True	NA	-20	True	AATAAA	-17	NA	29589549	29573471	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_29574915_29575078_29575143_29575287_29575471_29575629_29575704_29575811_29575899_29576077_29576132_29576219_29576451_29576521_29576675_29576862_29576997_29577135_29577248_29577644_29577743_29578298_29578372_29578730_29578780_29578961_29578989_29581337_29581381_29581741_29581837_29581926_29582145_29582697_29582804_29582924_29583038_29583482_29583617_29589326
H1_mix_00037373	chr17	-	3786	20	FSM	ENSG00000108262.16	ENST00000225394.8	3783	20	0	-3	0	3	multi-exon	FALSE	canonical	3	351	junction_9	30.7981544218071	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCTGATGCTTAGAGAAT	-16	True	NA	-20	True	AATAAA	-17	NA	29589648	29573471	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_29574915_29575078_29575143_29575287_29575471_29575629_29575704_29575811_29575899_29576077_29576132_29576219_29576451_29576521_29576675_29576862_29576997_29577135_29577248_29577644_29577743_29578298_29578372_29578730_29578780_29581337_29581381_29581741_29581837_29581926_29582145_29582697_29582804_29582924_29583038_29583482_29583617_29589326
H1_mix_00037374	chr17	-	555	5	FSM	ENSG00000108262.16	ENST00000578266.1	555	5	0	0	0	0	multi-exon	FALSE	canonical	3	397	junction_4	30.8585482484189	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAAACTGGGCCCTGATC	NA	False	NA	NA	False	NA	NA	NA	29576131	29574985	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_29575143_29575287_29575471_29575629_29575704_29575811_29575899_29576077
H1_mix_00037379	chr17	-	9327	15	FSM	ENSG00000141298.19	ENST00000269033.7	9327	15	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	2.814865785034	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTACTTCATCAGATGCA	55	False	NA	0	True	AATAAA	-21	NA	29930152	29625937	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_29632932_29635967_29636803_29648143_29648345_29650653_29650801_29655560_29655608_29666866_29666996_29667129_29667224_29671934_29672130_29676819_29676886_29677672_29677742_29684562_29684685_29695458_29695524_29702958_29703063_29793893_29793938_29929937
H1_mix_00037380	chr17	-	957	8	FSM	ENSG00000141298.19	ENST00000579040.5	965	8	0	8	0	-8	multi-exon	FALSE	canonical	1	3	junction_1	5.0709255283711	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGTAAATTATGGTACATC	34	True	NA	NA	False	AATAAA	-24	NA	29930173	29673908	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_29674160_29676819_29676886_29677672_29677742_29684562_29684685_29695458_29695524_29702958_29703063_29793893_29793938_29929937
H1_mix_00037381	chr17	-	570	2	FSM	ENSG00000141298.19	ENST00000590153.1	570	2	61	-61	0	1	multi-exon	FALSE	canonical	3	17	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGTTTTCTGTAGTGCC	40	True	NA	NA	False	AATAAA	-24	NA	29930167	29925215	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_29925556_29929937
H1_mix_00037382	chr17	-	2319	12	FSM	ENSG00000108578.15	ENST00000261714.11	2307	12	0	-12	0	12	multi-exon	FALSE	canonical	3	335	junction_8	37.309737722552	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATCTGTCTGAGAAGTG	23	True	NA	-4	True	AATAAA	-31	NA	30291944	30248190	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_30249169_30266884_30266955_30271270_30271389_30272560_30272629_30272740_30272900_30274041_30274198_30285387_30285481_30286813_30286903_30287805_30287948_30289372_30289483_30291310_30291509_30291806
H1_mix_00037383	chr17	-	281	2	FSM	ENSG00000108578.15	ENST00000579325.1	585	2	27	277	-6	-277	multi-exon	FALSE	canonical	3	402	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGTGAATGGCACTGGTA	6541	False	NA	NA	False	NA	NA	NA	30285512	30274041	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_30274198_30285387
H1_mix_00037385	chr17	-	4172	8	Fusion	ENSG00000265791.1_ENSG00000176390.12	novel	2873	8	NA	NA	-52	60	intron_retention	FALSE	canonical	0	0	junction_2	80.8611811207634	32	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTCTGTTCAAGTAAGTA	-36	True	NA	NA	False	NA	NA	NA	30824744	30781432	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr17_-_30784444_30785918_30786032_30792439_30792573_30793449_30793673_30796159_30796338_30797310_30797399_30803900_30804109_30824526
H1_mix_00037387	chr17	-	2109	3	FSM	ENSG00000172171.11	ENST00000580840.1	2109	3	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_2	10	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGCCTCTCAGGTTAA	-7	True	NA	-5	True	AATAAA	-13	NA	30906235	30898985	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_30900563_30904065_30904530_30906167
H1_mix_00037388	chr17	-	1306	4	FSM	ENSG00000172171.11	ENST00000581216.6	1306	4	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_3	8.80656320908194	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGCCTCTCAGGTTAA	-10	True	NA	-5	True	AATAAA	-13	NA	30906238	30898985	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_30899607_30900412_30900563_30904065_30904530_30906167
H1_mix_00037390	chr17	-	843	4	FSM	ENSG00000172301.11	ENST00000302362.11	868	4	31	-6	0	6	multi-exon	FALSE	canonical	2	450	junction_2	86.8498064988569	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTCGTCTGCTTTTTTCC	18	True	NA	-7	True	AATAAA	-22	NA	31859213	31851864	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_31852309_31852811_31853031_31856798_31856866_31859100
H1_mix_00037391	chr17	-	4337	19	FSM	ENSG00000108651.10	ENST00000261708.9	4330	19	0	-7	0	7	multi-exon	FALSE	canonical	3	434	junction_7	30.1205397292321	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACTTTAGAACATTTTTAT	-3	True	NA	-22	True	ATTAAA	-20	NA	31901708	31860896	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_31863517_31865365_31865439_31868045_31868113_31873377_31873488_31873672_31873754_31875233_31875414_31878249_31878328_31878701_31878782_31880572_31880755_31884423_31884506_31885979_31886062_31887235_31887314_31889284_31889404_31892259_31892324_31892746_31892795_31894644_31894738_31894969_31895012_31899645_31899731_31901535
H1_mix_00037392	chr17	-	1517	11	FSM	ENSG00000108651.10	ENST00000583408.5	1440	11	-51	-26	-51	26	multi-exon	FALSE	canonical	3	434	junction_1	29.4407880329315	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCGTGAGCCACCGTGCC	NA	False	NA	NA	False	NA	NA	NA	31901759	31880154	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_31880755_31884423_31884506_31885979_31886062_31887235_31887314_31889284_31889404_31892259_31892324_31892746_31892795_31894644_31894738_31894969_31895012_31899645_31899731_31901535
H1_mix_00037394	chr17	-	1572	2	FSM	ENSG00000214708.4	ENST00000398832.2	1599	2	0	27	0	-27	multi-exon	FALSE	canonical	3	10	junction_1	0	375	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATTAAAAAGTCACTAAAAA	32	False	NA	NA	False	NA	NA	NA	32143135	32141252	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_32142714_32143024
H1_mix_00037396	chr17	-	4552	10	FSM	ENSG00000108666.10	ENST00000577809.6	4547	10	0	-5	0	5	multi-exon	FALSE	canonical	0	0	junction_6	157.527971257155	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTTGTTTAATGAGCT	-21	True	NA	4	True	AATAAA	-23	NA	32342173	32328435	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_32331979_32333416_32333521_32334468_32334606_32334774_32334840_32335322_32335443_32337896_32337955_32338207_32338352_32339812_32339939_32341203_32341285_32341999
H1_mix_00037398	chr17	-	5500	22	FSM	ENSG00000176658.17	ENST00000318217.10	5510	22	-68	78	-15	9	multi-exon	FALSE	canonical	3	87	junction_19	15.049577931569	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTCTGCTTATCTGTCAC	98	False	NA	-3	True	AATAAA	-23	NA	32877192	32492599	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_32494916_32605086_32605242_32638721_32638836_32653842_32653948_32654476_32654622_32659114_32659339_32711987_32712196_32721022_32721190_32738252_32738386_32745210_32745286_32748935_32749007_32755491_32755663_32760289_32760405_32760481_32760628_32764877_32765082_32767635_32767753_32771124_32771221_32772788_32772843_32775863_32776030_32778479_32778574_32780575_32780785_32876777
H1_mix_00037403	chr17	-	1789	14	FSM	ENSG00000132141.14	ENST00000314144.10	1847	14	0	58	0	11	multi-exon	TRUE	canonical	1	1	junction_11	3.96881333523521	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTCTCAAAAATATTTCAT	-3	True	NA	2	True	AATAAA	-27	NA	34961460	34927918	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_34928118_34928961_34929035_34930948_34931052_34932366_34932501_34939182_34939331_34939616_34939714_34940538_34940622_34942483_34942644_34942795_34942907_34951949_34952054_34954425_34954600_34958559_34958695_34959586_34959651_34961256
H1_mix_00037404	chr17	-	7293	7	FSM	ENSG00000092871.17	ENST00000315249.11	7293	7	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_5	19.8781007364609	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAACATTGTTGGTATTAT	576	False	NA	NA	False	ATTAAA	-20	NA	35089319	35005989	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_35012150_35014739_35014764_35016369_35016581_35017522_35017607_35021370_35021782_35026373_35026562_35089104
H1_mix_00037405	chr17	-	4039	5	FSM	ENSG00000092871.17	ENST00000584655.5	4039	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	43.3301280865866	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGTCTGGTGCGAGGA	600	False	NA	-5	True	AATAAA	-18	NA	35089295	35009111	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_35012150_35016369_35016581_35021370_35021782_35026373_35026562_35089104
H1_mix_00037406	chr17	-	860	6	NIC	ENSG00000092871.17	novel	7293	7	NA	NA	-20	42	combination_of_known_junctions	FALSE	canonical	3	35	junction_4	34.0411515668903	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGGTTTCTTCAGTGCCTT	-17	True	NA	NA	False	NA	NA	NA	35089267	35011959	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_35012150_35014739_35014764_35016369_35016581_35017522_35017607_35026373_35026562_35089104
H1_mix_00037408	chr17	-	9948	10	FSM	ENSG00000185379.21	ENST00000345365.11	9966	10	25	-7	3	7	multi-exon	FALSE	canonical	3	24	junction_7	19.9078122267195	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAATATGTCACTTGGTA	8	True	NA	NA	False	AATAAA	-24	NA	35119835	35092213	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_35101037_35101200_35101366_35103253_35103325_35103453_35103545_35106385_35106482_35106987_35107123_35107365_35107448_35118500_35118620_35119110_35119173_35119531
H1_mix_00037409	chr17	-	1353	7	FSM	ENSG00000185379.21	ENST00000335858.11	1353	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	20.5946325261921	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTAGAGCCACCTGATT	4	True	NA	-12	True	TATAAA	-15	NA	35119745	35100382	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_35101037_35101200_35101366_35103253_35103325_35103453_35103545_35106385_35106482_35119110_35119173_35119531
H1_mix_00037410	chr17	-	8433	12	FSM	ENSG00000073536.18	ENST00000586869.5	5286	12	51	-3198	0	3175	multi-exon	FALSE	canonical	3	168	junction_10	19.4906207577045	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCATCTGCAACATGCTT	9084	False	NA	NA	False	AATAAA	-18	NA	35142233	35125554	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_35132450_35133170_35133242_35133338_35133499_35135248_35135452_35136168_35136216_35136361_35136498_35137000_35137194_35137542_35137641_35137813_35137891_35139234_35139315_35139848_35140067_35141978
H1_mix_00037411	chr17	-	5193	13	FSM	ENSG00000073536.18	ENST00000442241.9	5193	13	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_12	27.1890245421853	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCCCCCCAACCGGATCC	-9	True	NA	11	True	AATAAA	-39	NA	35142303	35128729	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_35132450_35133170_35133242_35133338_35133499_35135248_35135452_35136168_35136216_35136361_35136498_35137000_35137194_35137542_35137641_35137813_35137891_35139234_35139315_35139848_35140067_35141978_35142123_35142257
H1_mix_00037413	chr17	-	710	2	ISM	ENSG00000172716.17	ENST00000308377.8	4910	5	19832	2565	-644	-971	3prime_fragment	FALSE	canonical	3	62	junction_1	0	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCAATGCAGATCCAATAG	NA	False	NA	NA	False	NA	NA	NA	35353775	35352869	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_35353140_35353335
H1_mix_00037414	chr17	-	636	1	FSM	ENSG00000267547.1	ENST00000592117.1	537	1	-110	11	-110	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCTTTAACTCGGTGTC	NA	False	NA	-16	True	AATAAA	-6	NA	35404483	35403847	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_35403800_35404500
H1_mix_00037415	chr17	-	1210	2	FSM	ENSG00000267745.1	ENST00000587012.1	1212	2	0	2	0	-2	multi-exon	FALSE	canonical	1	2	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTAAAGTGTGATTTGTT	NA	False	NA	0	True	AATACA	-15	NA	35409768	35406685	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_35407592_35409464
H1_mix_00037416	chr17	-	910	1	FSM	ENSG00000267102.1	ENST00000590824.1	627	1	5	-288	5	288	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTGGCTGATACATTAAT	NA	False	NA	25	True	NA	NA	NA	35410223	35409313	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_35409300_35410200
H1_mix_00037417	chr17	-	8401	6	FSM	ENSG00000154760.14	ENST00000285013.11	8398	6	11	-14	0	14	multi-exon	FALSE	canonical	3	49	junction_4	23.2155120555201	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCTCACTTTTGAGGGG	20	True	NA	14	True	AATAAA	-33	NA	35448755	35435081	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_35441367_35441562_35442287_35443788_35443921_35444614_35445694_35447267_35447415_35448721
H1_mix_00037421	chr17	-	386	1	FSM	ENSG00000267312.1	ENST00000588022.1	1070	1	162	522	162	-522	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACCTTGTTGGCTTCTCTG	NA	False	NA	NA	False	NA	NA	NA	35460388	35460002	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_35460000_35460400
H1_mix_00037423	chr17	-	1074	2	Antisense	novelGene_ENSG00000270647.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	16	junction_1	0	196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTATTTCTTCTAAGTATG	3652	False	NA	NA	False	NA	NA	NA	35840983	35839370	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr17_-_35840292_35840830
H1_mix_00037424	chr17	-	6629	7	FSM	ENSG00000271013.1_ENSG00000278023.7	ENST00000620284.5	1163	7	46	-5512	0	67	multi-exon	FALSE	canonical	3	32	junction_2	22.6764684689266	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGGGCCTTCTTTAT	47	False	NA	NA	False	NA	NA	NA	35930727	35912567	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_35918444_35920186_35920273_35922576_35922676_35924603_35924773_35925514_35925638_35930075_35930256_35930631
H1_mix_00037425	chr17	-	6572	6	FSM	ENSG00000271013.1_ENSG00000278023.7	ENST00000616596.4	1032	6	-42	-5498	0	67	multi-exon	FALSE	canonical	2	4	junction_2	33.3142612104786	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGGGCCTTCTTTAT	5	True	NA	NA	False	NA	NA	NA	35930769	35912567	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_35918444_35920186_35920273_35924603_35924773_35925514_35925638_35930075_35930256_35930631
H1_mix_00037426	chr17	-	1549	6	FSM	ENSG00000278023.7	ENST00000619262.4	1535	6	0	-14	0	0	multi-exon	FALSE	canonical	3	32	junction_2	23.2843294943187	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGACGAGGCGGGGCCGCGG	5	True	NA	-5	True	AATAAA	-30	NA	35930769	35918065	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_35918444_35920186_35920273_35922576_35922676_35924603_35924773_35925514_35925638_35930075
H1_mix_00037427	chr17	-	1491	4	FSM	ENSG00000278023.7	ENST00000619876.4	1491	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	13.5728487143349	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCAGGAGATGGAGACCAT	-3	True	NA	NA	False	NA	NA	NA	35930753	35922154	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_35922676_35924603_35924773_35925514_35925638_35930075
H1_mix_00037428	chr17	-	779	5	FSM	ENSG00000278023.7	ENST00000613308.4	779	5	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	11.9032558571174	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTATAGTATGCTTTCATT	10	True	NA	-4	True	AATAAA	-20	NA	35930740	35922477	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_35922676_35924603_35924773_35925514_35925638_35930075_35930256_35930631
H1_mix_00037429	chr17	-	1038	3	FSM	ENSG00000278259.5	ENST00000620567.1	1038	3	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_2	9	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCACATAAGCACTTTTG	8457	False	NA	NA	False	NA	NA	NA	36499344	36495932	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_36496407_36498265_36498560_36499074
H1_mix_00037431	chr17	-	4472	18	ISM	ENSG00000278259.5	ENST00000614623.5	3931	26	18148	611	-2233	-62	intron_retention	FALSE	canonical	3	95	junction_14	33.398195256133	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGCCTTTGTTTCCACAA	6769	False	NA	NA	False	NA	NA	NA	36516720	36496246	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_36496407_36498265_36498560_36499074_36499161_36500829_36500960_36501068_36501236_36503096_36503201_36503949_36504021_36505296_36505405_36506455_36506609_36506962_36507140_36507398_36507513_36507802_36507925_36509061_36509136_36510745_36510918_36511364_36511456_36513428_36513506_36513628_36513726_36514445
H1_mix_00037432	chr17	-	3931	26	FSM	ENSG00000278259.5	ENST00000614623.5	3931	26	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_14	31.3591836628443	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTGAATGTCAAGTTTT	-10	True	NA	-2	True	AGTAAA	-15	NA	36534868	36495635	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_36496407_36498265_36498560_36499074_36499161_36500829_36500960_36501068_36501236_36503096_36503201_36503949_36504021_36505296_36505405_36506455_36506609_36506962_36507140_36507398_36507513_36507802_36507925_36509061_36509136_36510745_36510918_36511364_36511456_36513428_36513506_36513628_36513726_36514445_36514549_36515112_36515183_36515857_36515991_36525227_36525342_36527550_36527700_36528063_36528203_36532526_36532682_36533952_36534105_36534760
H1_mix_00037433	chr17	-	3004	25	NIC	ENSG00000278259.5	novel	3931	26	NA	NA	19	-62	combination_of_known_splicesites	FALSE	canonical	2	9	junction_1	44.2316934825396	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGCCTTTGTTTCCACAA	12	True	NA	NA	False	NA	NA	NA	36534846	36496246	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_36496407_36499074_36499161_36500829_36500960_36501068_36501236_36503096_36503201_36503949_36504021_36505296_36505405_36506455_36506609_36506962_36507140_36507398_36507513_36507802_36507925_36509061_36509136_36510745_36510918_36511364_36511456_36513428_36513506_36513628_36513726_36514445_36514549_36515112_36515183_36515857_36515991_36525227_36525342_36527550_36527700_36528063_36528203_36532526_36532682_36533952_36534105_36534760
H1_mix_00037434	chr17	-	1990	2	FSM	ENSG00000278259.5	ENST00000617189.1	1990	2	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAACAAAAAGAAAA	6033	False	NA	NA	False	NA	NA	NA	36501768	36499669	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_36500960_36501068
H1_mix_00037440	chr17	-	1640	11	FSM	ENSG00000278259.5	ENST00000621344.4	1640	11	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_4	12.879829191414	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCTGCTCACTTAGTTT	-10	True	NA	-26	True	ATTAAA	-21	NA	36534868	36513085	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_36513506_36513628_36513726_36514445_36514549_36515112_36515183_36515857_36515991_36525227_36525342_36527550_36527700_36528063_36528203_36532526_36532682_36533952_36534105_36534760
H1_mix_00037444	chr17	-	968	7	NNC	ENSG00000277268.2	novel	490	3	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	5.70574758954123	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGACCTCGTGTGGCTGTTG	4	True	NA	-3	True	AATAAA	-19	NA	36936658	36861675	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_36861963_36863016_36863120_36863281_36863414_36871208_36871310_36874591_36874735_36878326_36878434_36936563
H1_mix_00037446	chr17	-	642	2	FSM	ENSG00000277268.2	ENST00000614277.1	640	2	0	-2	0	2	multi-exon	FALSE	canonical	3	21	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTATTCTCTTCTGCCTTT	4	True	NA	-13	True	AATAAA	-22	NA	36936658	36906992	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_36907540_36936563
H1_mix_00037447	chr17	-	1419	2	FSM	ENSG00000277268.2	ENST00000621428.1	1462	2	0	43	0	-43	multi-exon	FALSE	canonical	3	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCCAACAAATAAATAAAACG	1834	False	NA	-47	True	NA	NA	NA	36936622	36932151	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_36933512_36936563
H1_mix_00037450	chr17	-	9563	56	FSM	ENSG00000278540.5	ENST00000614428.4	9554	56	0	-9	0	7	multi-exon	FALSE	canonical	0	0	junction_15	62.725575734621	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCATTTCAATCCATGC	-10	True	NA	-14	True	AATAAA	-27	NA	37359116	37084984	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_37087440_37088937_37089075_37096995_37097167_37097829_37097985_37111530_37111644_37113087_37113266_37121354_37121491_37122530_37122628_37125697_37125795_37129364_37129486_37130074_37130219_37149863_37149975_37151300_37151422_37155682_37155781_37161780_37162051_37179259_37179407_37181200_37181357_37188276_37188481_37191119_37191276_37192089_37192306_37193373_37193416_37200138_37200184_37200426_37200484_37205764_37205873_37206782_37206880_37207656_37207801_37210466_37210491_37221723_37221843_37223511_37223602_37224991_37225106_37226338_37226453_37234974_37235100_37240475_37240565_37241952_37242054_37243370_37243560_37244587_37244735_37245079_37245215_37246825_37246977_37248010_37248157_37248592_37248675_37252004_37252109_37252885_37253037_37257702_37257867_37258211_37258374_37259359_37259531_37263684_37263895_37270750_37270862_37274192_37274300_37275950_37276050_37277032_37277115_37277895_37278006_37283266_37283406_37284837_37284971_37330172_37330426_37339803_37339851_37358998
H1_mix_00037451	chr17	-	10020	56	FSM	ENSG00000278540.5	ENST00000616317.5	10013	56	0	-7	0	7	multi-exon	FALSE	canonical	0	0	junction_15	68.2754363340987	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCATTTCAATCCATGC	-6	True	NA	-14	True	AATAAA	-27	NA	37406836	37084984	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_37087440_37088937_37089075_37096995_37097167_37097829_37097985_37111530_37111644_37113087_37113266_37121354_37121491_37122530_37122628_37125697_37125795_37129364_37129486_37130074_37130219_37149863_37149975_37151300_37151422_37155682_37155781_37161780_37162051_37179259_37179407_37181200_37181357_37188276_37188481_37191119_37191276_37192089_37192306_37193373_37193416_37200138_37200184_37200426_37200484_37205764_37205873_37206782_37206880_37207656_37207801_37210466_37210491_37221723_37221843_37223511_37223602_37224991_37225106_37226338_37226453_37234974_37235100_37240475_37240565_37241952_37242054_37243370_37243560_37244587_37244735_37245079_37245215_37246825_37246977_37248010_37248157_37248592_37248675_37252004_37252109_37252885_37253037_37257702_37257867_37258211_37258374_37259359_37259531_37263684_37263895_37270750_37270862_37274192_37274300_37275950_37276050_37277032_37277115_37277895_37278006_37283266_37283406_37284837_37284971_37330172_37330426_37339803_37339851_37406261
H1_mix_00037452	chr17	-	814	1	FSM	ENSG00000274308.1	ENST00000610837.1	814	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAGTTTTTACATAAGAAA	NA	False	NA	NA	False	NA	NA	NA	37141424	37140610	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_37140600_37141400
H1_mix_00037453	chr17	-	742	1	FSM	ENSG00000275029.1	ENST00000615653.1	685	1	-172	115	0	-115	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGAGGAGGAGGAAGATGA	NA	False	NA	NA	False	AAAAAG	-35	NA	37144463	37143721	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_37143700_37144500
H1_mix_00037456	chr17	-	728	4	NIC	ENSG00000278540.5	novel	451	4	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	59.4866931898779	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATTGTTCTGTCTTACT	22	True	NA	1	True	AATAAA	-24	NA	37359084	37328644	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_37328987_37330172_37330426_37339803_37339851_37358998
H1_mix_00037457	chr17	-	8151	22	FSM	ENSG00000275066.5	ENST00000612223.5	8141	22	0	-10	0	10	multi-exon	FALSE	canonical	3	59	junction_16	15.8532098654673	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAAGCCTTTTCTTGGTCTT	-19	True	NA	-9	True	AATACA	-23	NA	37609418	37514796	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_37519072_37520178_37520215_37520537_37520649_37535978_37536128_37538323_37538421_37539191_37539246_37540379_37540544_37541971_37542566_37553114_37554060_37561194_37561258_37561470_37561590_37568790_37568925_37570636_37570886_37571790_37571988_37576340_37576419_37577379_37577614_37584647_37584760_37585324_37585431_37586418_37586550_37596222_37596345_37600362_37600404_37609278
H1_mix_00037460	chr17	-	4050	20	FSM	ENSG00000275066.5	ENST00000616179.4	4050	20	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	34.5105869179051	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGTTCTGCTTTTTATG	13	True	NA	NA	False	AATAAA	-21	NA	37609386	37518460	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_37519072_37520537_37520649_37535978_37536128_37538323_37538421_37539191_37539246_37540379_37540544_37541971_37542431_37553114_37554060_37561194_37561258_37561470_37561590_37568790_37568925_37570636_37570886_37571790_37571988_37576340_37576419_37584647_37584760_37585324_37585431_37586418_37586550_37596222_37596345_37600362_37600404_37609278
H1_mix_00037465	chr17	-	6383	15	FSM	ENSG00000278053.5	ENST00000617633.5	6383	15	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_12	53.7297185276568	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGACTCAGCCTACTCTT	-7	True	NA	-2	True	AATAAA	-35	NA	37643446	37609738	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_37614354_37618291_37618385_37619767_37619840_37620872_37620949_37621126_37621278_37621397_37621521_37624343_37624435_37625894_37626099_37626787_37626861_37628560_37628673_37630029_37630174_37632112_37632299_37633287_37633419_37642109_37642309_37643333
H1_mix_00037466	chr17	-	2793	9	FSM	ENSG00000275410.6	ENST00000617811.5	2790	9	0	-3	0	3	multi-exon	FALSE	canonical	3	27	junction_3	5.25446238924593	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTCTCATATTTCTGTCT	1	True	NA	-2	True	ATTAAA	-23	NA	37745059	37686427	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_37687393_37699075_37699195_37700982_37701178_37704916_37705050_37710502_37710664_37731594_37731831_37733556_37733822_37739439_37739640_37744540
H1_mix_00037467	chr17	-	1819	8	FSM	ENSG00000275410.6	ENST00000614313.4	1819	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	13.4103219459444	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACGTCCTGCTGGCACCTC	71	False	NA	NA	False	NA	NA	NA	37745018	37687241	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_37687393_37700982_37701178_37704916_37705050_37710502_37710664_37731594_37731831_37733556_37733822_37739439_37739640_37744540
H1_mix_00037470	chr17	-	1643	12	FSM	ENSG00000274487.3	ENST00000649858.2	1815	12	172	0	2	0	multi-exon	FALSE	canonical	1	2	junction_9	145.769488582669	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCAGAATCTGAAACTTTT	153	False	NA	NA	False	NA	NA	NA	38257192	38195702	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_38195941_38196366_38196472_38197545_38197711_38201104_38201220_38202071_38202106_38202237_38202335_38202780_38202982_38205634_38205743_38208994_38209117_38219045_38219124_38242200_38242286_38256897
H1_mix_00037474	chr17	-	401	2	FSM	ENSG00000276170.5	ENST00000615582.1	401	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAGCTGAGATTCTATTCC	1915	False	NA	NA	False	NA	NA	NA	38451688	38451055	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_38451394_38451625
H1_mix_00037476	chr17	-	569	3	FSM	ENSG00000276170.5	ENST00000613481.1	468	3	-101	0	-20	0	multi-exon	FALSE	canonical	3	16	junction_1	1.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACAGATTCCTCCAACAC	1139	False	NA	NA	False	NA	NA	NA	38452464	38451305	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_38451526_38451625_38451828_38452317
H1_mix_00037477	chr17	-	3254	1	FSM	ENSG00000273604.2	ENST00000621654.2	3255	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCCTTTCATTTTTCT	-6	True	NA	0	True	CATAAA	-21	NA	38674956	38671702	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_38671700_38675000
H1_mix_00037478	chr17	-	2554	10	ISM	ENSG00000277258.5	ENST00000620225.5	2634	11	304	0	152	0	3prime_fragment	TRUE	canonical	3	28	junction_9	26.7046026457825	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCCTGTAGTTCTTTGG	1796	False	NA	-4	True	AATAAA	-15	NA	38748032	38733897	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_38735601_38736089_38736171_38738352_38738449_38738540_38738596_38738752_38738862_38739067_38739119_38739197_38739254_38739585_38739683_38740290_38740443_38747878
H1_mix_00037479	chr17	-	2572	10	NIC	ENSG00000277258.5	novel	2634	11	NA	NA	9	0	intron_retention	FALSE	canonical	0	0	junction_9	33.8923495500783	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGAGCCTGTAGTTCTTT	1459	False	NA	-6	True	AATAAA	-13	NA	38748369	38733899	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_38735601_38736089_38736171_38738352_38738449_38738540_38738596_38738752_38738862_38739067_38739119_38739197_38739254_38739585_38739683_38740290_38740443_38748195
H1_mix_00037480	chr17	-	2634	11	FSM	ENSG00000277258.5	ENST00000620225.5	2634	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	35.8509414102336	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCCTGTAGTTCTTTGG	-7	True	NA	-4	True	AATAAA	-15	NA	38748336	38733897	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_38735601_38736089_38736171_38738352_38738449_38738540_38738596_38738752_38738862_38739067_38739119_38739197_38739254_38739585_38739683_38740290_38740443_38747878_38747972_38748195
H1_mix_00037481	chr17	-	5286	9	NIC	ENSG00000276293.5	novel	5383	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_7	37.1676943056736	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTTATGTGTGAGTCC	-52	True	NA	-15	True	AATAAA	-20	NA	38799556	38765690	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_38769772_38770435_38770540_38771013_38771273_38777686_38777801_38778333_38778373_38779382_38779530_38780451_38780605_38786822_38786921_38799265
H1_mix_00037482	chr17	-	5383	10	FSM	ENSG00000276293.5	ENST00000619039.5	5383	10	0	0	0	0	multi-exon	TRUE	canonical	3	101	junction_9	13.1740485635797	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTTATGTGTGAGTCC	-52	True	NA	-15	True	AATAAA	-20	NA	38799556	38765690	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_38769772_38770435_38770540_38771013_38771273_38777686_38777801_38778333_38778373_38779382_38779530_38780451_38780605_38784242_38784340_38786822_38786921_38799265
H1_mix_00037484	chr17	-	3073	10	FSM	ENSG00000273559.5	ENST00000614790.5	3067	10	0	-6	0	6	multi-exon	FALSE	canonical	3	74	junction_5	13.9044357430761	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTGTGGAGTACCGTGT	5	True	NA	-2	True	AATAAA	-36	NA	38825321	38800434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_38802207_38802699_38802862_38806296_38806396_38806764_38806977_38809701_38809766_38810467_38810596_38812794_38812865_38814860_38815098_38820900_38821074_38825165
H1_mix_00037485	chr17	-	3284	10	NIC	ENSG00000273559.5	novel	3067	10	NA	NA	10	1	intron_retention	FALSE	canonical	3	37	junction_5	22.6312359252908	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGACCACCTGTGGAGTAC	-19	True	NA	-7	True	AATAAA	-31	NA	38825345	38800439	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_38802207_38802699_38802862_38806296_38806396_38806764_38806977_38809701_38809766_38810275_38810596_38812794_38812865_38814860_38815098_38820900_38821074_38825165
H1_mix_00037486	chr17	-	1160	8	FSM	ENSG00000273559.5	ENST00000618122.4	1160	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	37.1439560277006	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACGCCAAATGGAGGGAG	9591	False	NA	NA	False	NA	NA	NA	38815735	38802814	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_38802862_38806296_38806396_38806764_38806977_38809701_38809766_38810275_38810596_38812794_38812865_38814860_38815098_38815624
H1_mix_00037487	chr17	-	2706	5	FSM	ENSG00000125691.14	ENST00000479035.7	2706	5	0	0	0	0	multi-exon	FALSE	canonical	3	5280	junction_4	898.178260424956	2773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAATGTTTTCCTTTGTCA	9	True	NA	NA	False	ATTAAA	-22	NA	38853721	38847859	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_38850215_38850361_38850476_38852603_38852733_38853021_38853106_38853697
H1_mix_00037488	chr17	-	630	6	FSM	ENSG00000125691.14	ENST00000394332.5	625	6	0	-5	0	0	multi-exon	FALSE	canonical	3	328	junction_1	2722.71585002916	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAATGTTTTCCTTTGTCA	8	True	NA	NA	False	ATTAAA	-22	NA	38853722	38847859	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_38848040_38850116_38850215_38850361_38850476_38852603_38852733_38853021_38853106_38853697
H1_mix_00037491	chr17	-	615	4	FSM	ENSG00000125691.14	ENST00000577407.5	615	4	0	0	0	0	multi-exon	FALSE	canonical	3	5280	junction_3	994.9275797207	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAAAAAAAAAACTA	-7	True	NA	6	True	NA	NA	NA	38853737	38850113	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_38850476_38852603_38852733_38853021_38853106_38853697
H1_mix_00037493	chr17	-	653	2	FSM	ENSG00000161381.14	ENST00000578277.1	654	2	1	0	1	0	multi-exon	FALSE	canonical	3	18	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCCTGACCATTCCACCT	NA	False	NA	NA	False	NA	NA	NA	39070470	39067921	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_39067960_39069855
H1_mix_00037495	chr17	-	1889	13	FSM	ENSG00000067191.16	ENST00000344140.5	1889	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	24.540640895371	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTGGTGTCTGTGGTTT	-1	True	NA	NA	False	NA	NA	NA	39197703	39177135	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_39177536_39177983_39178080_39183712_39183865_39184030_39184141_39184324_39184384_39184783_39184865_39185949_39186105_39186495_39186573_39186792_39186930_39187478_39187602_39191473_39191594_39194883_39194971_39197411
H1_mix_00037496	chr17	-	10332	15	FSM	ENSG00000108306.13	ENST00000264658.11	10332	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_14	5.50880556704538	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTTCATTTTCCTGTGG	4	True	NA	-20	True	ATTAAA	-17	NA	39401626	39252662	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_39261568_39264174_39264388_39265396_39265454_39268826_39268872_39270795_39270857_39274969_39275101_39281388_39281464_39282728_39282856_39285477_39285574_39297126_39297196_39298989_39299085_39301000_39301076_39303584_39303640_39343179_39343242_39401360
H1_mix_00037497	chr17	-	2309	14	FSM	ENSG00000108306.13	ENST00000394294.7	2309	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	8.64281348011578	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTAGGGGACCCTGCCTG	7	True	NA	-10	True	AATAAA	-24	NA	39401623	39260586	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_39261568_39264174_39264388_39265396_39265454_39268826_39268872_39270795_39270857_39274969_39275101_39281388_39281464_39282728_39282856_39297126_39297196_39298989_39299085_39301000_39301076_39303584_39303640_39343179_39343242_39401360
H1_mix_00037498	chr17	-	8156	17	FSM	ENSG00000125686.12	ENST00000300651.11	8137	17	0	-19	0	19	multi-exon	FALSE	canonical	3	23	junction_4	6.06958349065239	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAGCCTTTGAATACTT	-2	True	NA	19	True	AATAAA	-39	NA	39451263	39404265	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_39410722_39415025_39415132_39415243_39415340_39419716_39419919_39423326_39423446_39423696_39423822_39424626_39424739_39427700_39427791_39431114_39431189_39431941_39432017_39434248_39434321_39439164_39439194_39440385_39440519_39440622_39440678_39443549_39443629_39447797_39447905_39451037
H1_mix_00037499	chr17	-	2886	18	FSM	ENSG00000125686.12	ENST00000394287.7	2870	18	3	-19	-2	19	multi-exon	TRUE	canonical	2	7	junction_1	8.27134964280285	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAGCCTTTGAATACTT	-4	True	NA	19	True	AATAAA	-39	NA	39451265	39404265	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_39405309_39410580_39410722_39415025_39415132_39415243_39415340_39419716_39419919_39423326_39423446_39423696_39423822_39424626_39424739_39427700_39427791_39431114_39431189_39431941_39432017_39434248_39434321_39439164_39439194_39440385_39440519_39440622_39440678_39443549_39443629_39447797_39447905_39451037
H1_mix_00037500	chr17	-	2980	7	FSM	ENSG00000161395.14	ENST00000309862.10	3028	7	56	-8	0	7	multi-exon	FALSE	canonical	3	108	junction_2	16.8498269031663	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCAGCTCATTTGTGTG	37	False	NA	5	True	AATAAA	-24	NA	39688001	39671114	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_39672867_39673050_39673256_39673513_39674055_39674616_39674680_39684596_39684750_39685921_39686020_39687833
H1_mix_00037501	chr17	-	2694	8	FSM	ENSG00000161395.14	ENST00000300658.9	2687	8	0	-7	0	7	multi-exon	FALSE	canonical	3	74	junction_3	23.8353193597147	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCAGCTCATTTGTGTG	-19	True	NA	5	True	AATAAA	-24	NA	39688057	39671114	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_39672867_39673050_39673256_39673513_39673651_39673992_39674055_39674616_39674680_39684596_39684750_39685921_39686020_39687833
H1_mix_00037503	chr17	-	804	6	FSM	ENSG00000161395.14	ENST00000584620.5	804	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	60.4297939761505	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACACATCAGCTGTCCTG	37	False	NA	NA	False	NA	NA	NA	39688001	39673874	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_39674055_39674616_39674680_39676613_39676756_39684596_39684750_39685921_39686020_39687833
H1_mix_00037504	chr17	-	1411	4	FSM	ENSG00000141741.12	ENST00000394231.8	1397	4	0	-14	0	0	multi-exon	FALSE	canonical	3	592	junction_3	22.6421435969889	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGATACTGACACCATT	0	True	NA	NA	False	AGTAAA	-29	NA	39730532	39728495	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_39729606_39729684_39729762_39730193_39730292_39730406
H1_mix_00037506	chr17	-	2078	4	FSM	ENSG00000073605.19	ENST00000479136.5	2209	4	131	0	-109	0	multi-exon	FALSE	canonical	3	26	junction_1	3.85861230093008	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCTTTTGAAGCCTCA	9976	False	NA	0	True	ATTAAA	-23	NA	39907608	39904594	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_39904965_39905425_39905497_39905846_39905986_39906110
H1_mix_00037508	chr17	-	2111	4	FSM	ENSG00000172057.10	ENST00000304046.7	2109	4	0	-2	0	0	multi-exon	FALSE	canonical	3	47	junction_3	15.1070255914995	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTGGCCTTCGCTT	-1	True	NA	-6	True	AATAAA	-22	NA	39927601	39921040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_39922686_39923111_39923264_39924029_39924226_39927483
H1_mix_00037509	chr17	-	2179	4	FSM	ENSG00000172057.10	ENST00000579695.5	2106	4	0	-73	0	73	multi-exon	FALSE	canonical	3	35	junction_3	20.1714870272097	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGTGGGGCATCAGTGC	-1	True	NA	67	True	NA	NA	NA	39927601	39920967	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_39922686_39923111_39923264_39924029_39924221_39927483
H1_mix_00037510	chr17	-	3896	25	FSM	ENSG00000008838.21	ENST00000394126.5	3896	25	0	0	0	0	multi-exon	TRUE	canonical	3	183	junction_20	25.7859444379211	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTGCTGTTGGTATT	520	False	NA	-6	True	AATAAA	-24	NA	40054092	40019096	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_40019646_40019784_40019934_40020272_40020354_40021954_40022055_40022393_40022485_40022644_40022827_40023130_40023396_40026155_40026332_40026646_40026747_40026855_40027035_40027382_40027466_40027908_40027947_40028825_40028969_40029747_40029860_40031158_40031246_40031537_40031621_40032042_40032091_40032648_40032763_40033055_40033207_40033344_40033457_40035116_40035350_40035721_40035796_40036115_40036155_40053297_40053381_40053468
H1_mix_00037513	chr17	-	3487	26	FSM	ENSG00000008838.21	ENST00000394128.7	3480	26	0	-7	0	0	multi-exon	FALSE	canonical	3	105	junction_25	39.892134563094	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTGCTGTTGGTATT	-2	True	NA	-6	True	AATAAA	-24	NA	40054408	40019096	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_40019646_40019784_40019934_40020272_40020354_40021954_40022055_40022393_40022485_40022644_40022827_40023130_40023396_40026155_40026332_40026646_40026747_40026855_40027035_40027382_40027466_40027908_40027947_40028825_40028969_40029747_40029860_40031158_40031246_40031537_40031621_40032042_40032091_40032648_40032763_40033055_40033207_40033344_40033457_40035116_40035350_40035721_40035796_40036115_40036155_40053297_40053381_40053468_40053636_40054360
H1_mix_00037514	chr17	-	3414	25	NIC	ENSG00000008838.21	novel	3896	25	NA	NA	-115	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_3	57.9604600616278	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTTGTGACTGTGTGTG	1120	False	NA	-17	True	AATAAA	-13	NA	40053492	40019107	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_40019646_40019784_40019934_40020272_40020483_40021954_40022055_40022393_40022485_40022644_40022827_40023130_40023396_40026155_40026332_40026646_40026747_40026855_40027035_40027382_40027466_40027908_40027947_40028825_40028969_40029747_40029860_40031158_40031246_40031537_40031621_40032042_40032091_40032648_40032763_40033055_40033207_40033344_40033457_40035116_40035350_40035721_40035796_40036115_40036155_40053297_40053381_40053468
H1_mix_00037517	chr17	-	3532	27	NIC	ENSG00000008838.21	novel	3480	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_20	69.0055417549881	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTTGTGACTGTGTGTG	-1	True	NA	-17	True	AATAAA	-13	NA	40054407	40019107	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_40019646_40019784_40019934_40020272_40020354_40021954_40022055_40022393_40022485_40022644_40022827_40023130_40023396_40026155_40026332_40026646_40026747_40026855_40027035_40027382_40027466_40027908_40027947_40028825_40028969_40029747_40029860_40031158_40031246_40031537_40031621_40032042_40032091_40032648_40032763_40033055_40033207_40033344_40033457_40034915_40034973_40035116_40035350_40035721_40035796_40036115_40036155_40053297_40053381_40053468_40053636_40054360
H1_mix_00037522	chr17	-	2699	8	FSM	ENSG00000126368.6	ENST00000246672.4	2630	8	-69	0	-69	0	multi-exon	FALSE	canonical	3	31	junction_7	3.39867921524866	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCTTCTGTGGTGTGTG	7570	False	NA	-6	True	NA	NA	NA	40100658	40092792	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_40093283_40093911_40094123_40094934_40095121_40095443_40096088_40096442_40096588_40096690_40096780_40097064_40097404_40100063
H1_mix_00037524	chr17	-	451	1	FSM	ENSG00000240125.1	ENST00000491601.1	451	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGTCCAGCTGTCCAAT	3653	False	NA	NA	False	NA	NA	NA	40439917	40439466	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_40439500_40439900
H1_mix_00037526	chr17	-	2500	12	FSM	ENSG00000073584.20	ENST00000644701.1	2488	12	0	-12	0	0	multi-exon	FALSE	canonical	3	34	junction_2	451.564973862937	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTCAGTGTTTTTAATGC	-3	True	NA	-2	True	AATAAA	-18	NA	40647837	40627709	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_40628994_40630207_40630287_40630713_40630925_40631591_40631694_40632194_40632368_40635930_40636103_40636394_40636527_40637491_40637573_40642454_40642560_40645575_40645620_40645795_40645848_40647772
H1_mix_00037527	chr17	-	2876	10	FSM	ENSG00000073584.20	ENST00000469334.6	2856	10	0	-20	0	0	multi-exon	FALSE	canonical	3	1072	junction_2	90.8490812036949	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTCCAAATGTAATAAAAAAA	10	True	NA	-35	True	NA	NA	NA	40647824	40627742	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_40628994_40630713_40630925_40631591_40632368_40635930_40636103_40636394_40636527_40637491_40637573_40642454_40642560_40645575_40645620_40645795_40645848_40647772
H1_mix_00037528	chr17	-	2171	4	FSM	ENSG00000073584.20	ENST00000474246.2	2156	4	0	-15	0	15	multi-exon	FALSE	canonical	3	1197	junction_2	25.8499946271217	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTACTTTTGGGGGTGA	-12	True	NA	10	True	AATAAA	-31	NA	40647846	40640558	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_40642560_40645575_40645620_40645795_40645848_40647772
H1_mix_00037529	chr17	-	2793	6	FSM	ENSG00000213424.9	ENST00000394052.5	2703	6	0	-90	0	90	multi-exon	FALSE	canonical	3	10	junction_1	2.78567765543682	202	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATGTAGATTTTAAAATA	-23	True	NA	NA	False	NA	NA	NA	40665177	40654574	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_40656631_40657351_40657488_40657673_40657751_40659986_40660208_40661915_40662045_40665003
H1_mix_00037530	chr17	-	1050	2	ISM	ENSG00000186395.9	ENST00000269576.6	2143	8	3474	-330	3474	330	3prime_fragment	FALSE	canonical	3	1397	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAATTACCTGACTTCTCA	3473	False	NA	NA	False	AATAAA	-37	NA	40819140	40817786	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_40818483_40818786
H1_mix_00037532	chr17	-	1390	6	FSM	ENSG00000171345.13	ENST00000361566.7	1390	6	0	0	0	0	multi-exon	FALSE	canonical	3	4345	junction_5	224.824020069031	1024	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGGACGTTTGGTTTATT	-2	True	NA	-14	True	AATAAA	-19	NA	41528308	41523616	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41523998_41524142_41524269_41524378_41524541_41524842_41525000_41525190_41525274_41527827
H1_mix_00037534	chr17	-	4979	10	FSM	ENSG00000173805.16	ENST00000393939.6	5683	10	1	703	0	-703	multi-exon	TRUE	canonical	3	3	junction_4	5.44557811326349	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAACGGAGATGCAGGAG	0	True	NA	NA	False	GATAAA	-8	NA	41734643	41721515	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41725155_41725858_41725898_41727052_41727145_41728200_41728332_41731492_41731560_41731637_41731744_41731936_41732119_41732229_41732395_41732718_41732799_41734165
H1_mix_00037535	chr17	-	3205	15	FSM	ENSG00000173801.17	ENST00000310706.9	3200	15	0	-5	0	5	multi-exon	FALSE	canonical	3	342	junction_1	70.2251481206799	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTAGGGGAGTGGGGTGG	5	True	NA	4	True	AATAAA	-24	NA	41786698	41754598	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41755433_41755729_41755896_41756174_41756215_41757414_41757537_41757633_41757785_41758398_41758519_41758714_41758871_41762982_41763322_41764712_41764817_41764922_41765068_41767378_41767581_41768968_41769208_41769417_41769678_41771646_41771863_41786587
H1_mix_00037538	chr17	-	432	3	FSM	ENSG00000173801.17	ENST00000465293.1	432	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	21.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAACCTGATGGAGCAGC	494	False	NA	NA	False	NA	NA	NA	41786209	41771846	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41771863_41772817_41772927_41785902
H1_mix_00037539	chr17	-	1879	3	FSM	ENSG00000141696.13	ENST00000484247.1	1866	3	0	-13	0	6	multi-exon	FALSE	canonical	3	151	junction_1	7	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCGTCTCCCTGGAGCT	5129	False	NA	3	True	AATAAA	-30	NA	41807490	41801940	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41802980_41803286_41803432_41806795
H1_mix_00037540	chr17	-	2364	8	FSM	ENSG00000141696.13	ENST00000393928.6	2352	8	0	-12	0	6	multi-exon	FALSE	canonical	3	131	junction_5	12.1117247967009	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCGTCTCCCTGGAGCT	12	True	NA	3	True	AATAAA	-30	NA	41811949	41801940	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41802980_41803286_41803432_41806795_41806880_41807858_41808005_41809705_41809835_41810862_41811035_41811131_41811285_41811453
H1_mix_00037543	chr17	-	4308	29	NNC	ENSG00000131473.17	novel	4309	29	NA	NA	0	45807	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	458.820810027494	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGTCTCAGCCCCTCAC	26	False	NA	NA	False	AAAAAG	-2	NA	41918962	41821109	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_41821141_41866918_41867905_41868708_41868786_41869042_41869126_41869473_41869588_41871688_41871833_41872031_41872183_41873810_41873966_41878102_41878197_41878796_41878925_41883121_41883233_41884192_41884275_41886111_41886309_41887598_41887704_41892278_41892448_41893032_41893175_41897748_41897840_41898630_41898786_41901695_41901814_41904728_41904791_41905521_41905659_41906527_41906647_41907441_41907573_41908988_41909069_41909509_41909701_41910221_41910285_41912419_41912543_41913714_41913901_41918879
H1_mix_00037544	chr17	-	4329	30	NNC	ENSG00000131473.17	novel	4309	29	NA	NA	0	45802	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	398.2732497302	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATTATGGTCTCAGCCC	26	False	NA	NA	False	NA	NA	NA	41918962	41821114	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_41821141_41866918_41867905_41868708_41868786_41869042_41869126_41869473_41869588_41871688_41871833_41872031_41872183_41873810_41873966_41878102_41878197_41878796_41878925_41883121_41883233_41884192_41884275_41886111_41886309_41887598_41887704_41892278_41892448_41893032_41893175_41896619_41896650_41897748_41897840_41898630_41898786_41901695_41901814_41904728_41904791_41905521_41905659_41906527_41906647_41907441_41907573_41908988_41909069_41909509_41909701_41910221_41910285_41912419_41912543_41913714_41913897_41918879
H1_mix_00037545	chr17	-	1420	9	FSM	ENSG00000141698.17	ENST00000435506.7	1408	9	0	-12	0	12	multi-exon	FALSE	canonical	3	146	junction_8	162.772655873153	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGTCTGGTTCAGCG	-9	True	NA	NA	False	NA	NA	NA	41836232	41825044	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41825658_41827425_41827627_41828789_41828953_41830800_41830891_41832391_41832478_41835069_41835117_41835202_41835273_41835858_41835958_41836181
H1_mix_00037551	chr17	-	7387	2	FSM	ENSG00000178502.6	ENST00000319121.4	7402	2	19	-4	19	4	multi-exon	FALSE	canonical	3	42	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTACTGTGTGACTTTT	12	True	NA	-3	True	AATAAA	-19	NA	41865404	41848513	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41855322_41864825
H1_mix_00037554	chr17	-	4318	28	FSM	ENSG00000131473.17	ENST00000353196.5	4318	28	0	0	0	0	multi-exon	FALSE	canonical	3	593	junction_15	285.329847869178	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATGAAGGCATACTGCT	NA	False	NA	-50	True	AATAAA	-10	NA	41919019	41866930	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41867905_41868708_41868786_41869042_41869126_41869473_41869588_41871688_41871833_41872031_41872183_41873810_41873966_41878102_41878197_41878796_41878925_41883121_41883233_41884192_41884275_41886111_41886309_41887598_41887704_41892278_41892448_41893032_41893175_41897748_41897840_41898630_41898786_41901695_41901814_41904728_41904791_41905521_41905659_41906527_41906647_41907441_41907573_41908988_41909069_41909509_41909701_41910221_41910285_41912419_41912543_41913714_41913897_41918879
H1_mix_00037555	chr17	-	3682	28	FSM	ENSG00000131473.17	ENST00000393896.6	3682	28	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_27	353.414413400828	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGCTCTGCTACCTGCT	NA	False	NA	-13	True	AATAAA	-20	NA	41919022	41867573	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41867905_41868708_41868786_41869042_41869126_41869473_41869588_41871688_41871833_41872031_41872183_41873810_41873966_41878102_41878197_41878796_41878925_41883121_41883233_41884192_41884275_41886111_41886309_41887598_41887704_41892278_41892448_41893032_41893175_41897748_41897840_41898630_41898786_41901695_41901814_41904728_41904791_41905521_41905659_41906527_41906647_41907441_41907573_41908988_41909069_41909509_41909701_41910221_41910285_41912419_41912543_41913714_41913901_41918879
H1_mix_00037556	chr17	-	1898	15	FSM	ENSG00000168259.17	ENST00000586335.2	1876	15	0	-22	0	0	multi-exon	FALSE	canonical	3	20	junction_6	267.531154012663	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTTGCTCTGGCATCTG	7	True	NA	-20	True	AATAAA	-19	NA	42017431	41976434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987594_41987695_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42017339
H1_mix_00037557	chr17	-	1806	14	FSM	ENSG00000168259.17	ENST00000457167.9	1806	14	0	0	0	0	multi-exon	FALSE	canonical	3	567	junction_13	93.9573112182386	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTTGCTCTGGCATCTG	-1	True	NA	-20	True	AATAAA	-19	NA	42017439	41976434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42017339
H1_mix_00037558	chr17	-	3166	5	FSM	ENSG00000168259.17	ENST00000590197.2	3144	5	0	-22	0	0	multi-exon	FALSE	canonical	3	751	junction_1	36.1247837363769	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAGAGAATAAA	3435	False	NA	22	True	ATTAAA	-4	NA	41986067	41976472	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562
H1_mix_00037559	chr17	-	1796	14	FSM	ENSG00000168259.17	ENST00000426588.7	1774	14	0	-22	0	0	multi-exon	FALSE	canonical	3	65	junction_13	203.049881649485	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATGTTTTGACCCTTCC	5	True	NA	38	True	ATTAAA	-20	NA	42017151	41976456	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42017039
H1_mix_00037560	chr17	-	1674	13	FSM	ENSG00000168259.17	ENST00000674306.1	1658	13	0	-16	0	0	multi-exon	FALSE	canonical	3	30	junction_10	223.82103155572	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATGTTTTGACCCTTCC	-5	True	NA	38	True	ATTAAA	-20	NA	42017443	41976456	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41997114_41997240_42000481_42000571_42017339
H1_mix_00037561	chr17	-	2183	14	FSM	ENSG00000168259.17	ENST00000590774.6	2161	14	0	-22	0	0	multi-exon	FALSE	canonical	1	1	junction_13	218.934266431163	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGAGGCAGCTTGTGAATT	5	True	NA	-28	True	NA	NA	NA	42017151	41976522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42016586
H1_mix_00037562	chr17	-	1729	14	FSM	ENSG00000168259.17	ENST00000674166.1	1729	14	0	0	0	0	multi-exon	TRUE	canonical	3	88	junction_13	197.389112005859	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGAGGCAGCTTGTGAATT	-6	True	NA	-28	True	NA	NA	NA	42017162	41976522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42017051
H1_mix_00037563	chr17	-	1741	14	FSM	ENSG00000168259.17	ENST00000674214.1	1692	14	-34	-15	-34	0	multi-exon	FALSE	canonical	3	174	junction_13	176.499962284388	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGAGGCAGCTTGTGAATT	NA	False	NA	-28	True	NA	NA	NA	42018560	41976522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42018437
H1_mix_00037564	chr17	-	1989	4	FSM	ENSG00000187595.17	ENST00000461831.1	1989	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	5.31245915016974	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTGTGTCCTAATTC	-4	True	NA	0	True	AATAAA	-17	NA	42028689	42025575	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42027134_42027617_42027729_42028049_42028247_42028566
H1_mix_00037565	chr17	-	2899	1	ISM	ENSG00000267221.3	ENST00000587304.3	3733	3	9464	7	9464	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATCATGCAGTCTCCATG	9462	False	NA	-6	True	AATAAA	-13	NA	42041137	42038238	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_42038200_42041100
H1_mix_00037566	chr17	-	1503	8	NIC	ENSG00000108771.13	novel	2591	14	NA	NA	-1462	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	16.723440716185	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTGTCTTAATTTTG	3394	False	NA	0	True	AATAAA	-21	NA	42109310	42101403	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_42101947_42102215_42102313_42103607_42103799_42104765_42104928_42105017_42105168_42107603_42107796_42107981_42108109_42109269
H1_mix_00037569	chr17	-	3113	18	FSM	ENSG00000108773.11	ENST00000225916.10	3115	18	0	2	0	-2	multi-exon	TRUE	canonical	3	59	junction_12	30.9554876319672	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATTGTTTCTTTGGTGT	-13	True	NA	-4	True	AATAAA	-17	NA	42121367	42113112	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42113843_42113999_42114085_42114218_42114283_42114357_42114395_42114489_42114605_42114891_42115036_42115722_42115834_42117034_42117162_42117387_42117597_42117677_42117815_42117906_42118018_42118296_42118404_42119244_42119437_42119536_42119719_42120029_42120120_42120224_42120371_42120705_42120830_42120965
H1_mix_00037570	chr17	-	3304	18	FSM	ENSG00000108773.11	ENST00000465682.5	2990	18	-309	-5	0	-2	multi-exon	FALSE	canonical	3	101	junction_12	23.640619550544	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATTGTTTCTTTGGTGT	-13	True	NA	-4	True	AATAAA	-17	NA	42121367	42113112	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42113843_42113999_42114085_42114218_42114283_42114357_42114395_42114489_42114605_42114891_42115036_42115722_42115834_42117034_42117162_42117387_42117597_42117677_42117815_42117906_42118018_42118296_42118404_42119053_42119437_42119536_42119719_42120029_42120120_42120224_42120371_42120705_42120830_42120965
H1_mix_00037571	chr17	-	1640	6	FSM	ENSG00000108774.15	ENST00000346213.9	1640	6	0	0	0	0	multi-exon	FALSE	canonical	3	657	junction_2	52.681685622235	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATTGTCTTCCTTGTCTTT	-1	True	NA	-8	True	AATATA	-23	NA	42154989	42124978	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42125899_42126754_42126849_42128260_42128384_42128648_42128801_42130336_42130591_42154892
H1_mix_00037572	chr17	-	812	4	FSM	ENSG00000108774.15	ENST00000550406.1	500	4	-55	-257	-2	64	multi-exon	FALSE	canonical	2	21	junction_2	352.154322231982	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTAGATAATTTGGCT	NA	False	NA	NA	False	NA	NA	NA	42155019	42128486	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42128801_42130336_42130591_42137761_42137879_42154892
H1_mix_00037575	chr17	-	5082	19	FSM	ENSG00000173757.10	ENST00000293328.8	5079	19	0	-3	0	3	multi-exon	FALSE	canonical	3	162	junction_11	19.1827629673551	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGAGTCCTGTTTTTACT	1	True	NA	-7	True	AATAAA	-21	NA	42276391	42199173	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42201865_42202339_42202448_42202756_42202809_42207557_42207729_42210170_42210302_42210402_42210498_42211983_42212191_42216013_42216107_42217159_42217283_42217376_42217465_42218150_42218331_42218722_42218879_42219311_42219464_42219711_42219843_42223381_42223557_42224778_42224869_42227528_42227686_42231999_42232138_42276247
H1_mix_00037577	chr17	-	1675	5	FSM	ENSG00000173757.10	ENST00000481517.1	999	5	-676	0	-676	0	multi-exon	FALSE	canonical	3	213	junction_4	8.0156097709407	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGGAATGATGGGTGAGA	3696	False	NA	NA	False	AAAACA	-11	NA	42218547	42210416	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42210498_42211983_42212191_42216013_42216107_42217159_42217283_42217376
H1_mix_00037580	chr17	-	4935	24	FSM	ENSG00000168610.16	ENST00000264657.10	4921	24	0	-14	0	14	multi-exon	FALSE	canonical	3	401	junction_23	70.0816159363462	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTTTGGCTGGTGGAGG	-31	True	NA	2	True	AATAAA	-33	NA	42388442	42313309	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42315801_42316788_42316902_42317181_42317225_42322281_42322495_42323003_42323144_42323259_42323355_42323572_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42348388_42348540_42388278
H1_mix_00037581	chr17	-	4889	22	FSM	ENSG00000168610.16	ENST00000679231.1	4880	22	0	-9	0	0	multi-exon	FALSE	canonical	3	27	junction_21	123.967737738494	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTCTTTTTTTTTT	-20	True	NA	-33	True	NA	NA	NA	42388431	42313411	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42315801_42316788_42316902_42317181_42317225_42322281_42322495_42323003_42323144_42323259_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42388278
H1_mix_00037583	chr17	-	5063	23	FSM	ENSG00000168610.16	ENST00000678764.1	5054	23	0	-9	0	0	multi-exon	FALSE	canonical	3	401	junction_22	71.6406320832616	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTCTTTTTTTTTT	123	False	42388492	-33	True	NA	NA	NA	42388454	42313411	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42315801_42316788_42316902_42317181_42317225_42322281_42322495_42323003_42323144_42323259_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42348388_42348540_42388278
H1_mix_00037584	chr17	-	4899	24	FSM	ENSG00000168610.16	ENST00000679014.1	4890	24	0	-9	0	0	multi-exon	FALSE	canonical	3	127	junction_3	110.018506777943	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTCTTTTTTTTTT	-19	True	NA	-33	True	NA	NA	NA	42388511	42313411	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42315801_42316788_42316902_42317181_42317225_42322284_42322495_42323003_42323144_42323259_42323355_42323572_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42348388_42348540_42388278
H1_mix_00037586	chr17	-	4812	24	FSM	ENSG00000168610.16	ENST00000677030.1	4812	24	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	119.871985908598	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTCATAGTGTAAAAATT	-13	True	NA	-67	True	NA	NA	NA	42388505	42313445	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42315801_42316788_42316852_42317181_42317225_42322281_42322495_42323003_42323144_42323259_42323355_42323572_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42348388_42348540_42388278
H1_mix_00037590	chr17	-	4782	24	FSM	ENSG00000168610.16	ENST00000679185.1	4782	24	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	145.092174600958	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACTGCATTCAAATTCCA	-11	True	NA	-92	True	NA	NA	NA	42388503	42313470	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42315801_42316788_42316852_42317181_42317225_42322284_42322495_42323003_42323144_42323259_42323355_42323572_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42348388_42348540_42388278
H1_mix_00037591	chr17	-	4799	24	FSM	ENSG00000168610.16	ENST00000678827.1	4800	24	1	0	1	0	multi-exon	FALSE	canonical	3	60	junction_2	131.553837261779	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACTGCATTCAAATTCCA	38	False	NA	-92	True	NA	NA	NA	42388539	42313470	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42315801_42316788_42316852_42317181_42317225_42322281_42322495_42323003_42323144_42323259_42323355_42323572_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42348388_42348518_42388278
H1_mix_00037594	chr17	-	4942	24	FSM	ENSG00000168610.16	ENST00000588969.5	2772	24	5	-2175	0	8	multi-exon	FALSE	canonical	3	237	junction_23	89.9050959400658	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCAGCTCTGTTTGGCTGG	15	True	NA	-4	True	AATAAA	-27	NA	42388477	42313315	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42315801_42316788_42316902_42317181_42317225_42322281_42322495_42323003_42323144_42323259_42323355_42323572_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42348388_42348518_42388278
H1_mix_00037597	chr17	-	4947	3	FSM	ENSG00000168610.16	ENST00000462269.1	698	3	-1968	-2281	543	8	multi-exon	FALSE	canonical	3	438	junction_2	59	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCAGCTCTGTTTGGCTGG	9938	False	NA	-4	True	AATAAA	-27	NA	42319530	42313315	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42315801_42316788_42316902_42317181
H1_mix_00037601	chr17	-	1020	1	FSM	ENSG00000168610.16	ENST00000590776.1	1483	1	426	37	378	-37	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTTATTTTATATTAAAT	582	False	NA	NA	False	NA	NA	NA	42387995	42386975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42387000_42388000
H1_mix_00037603	chr17	-	668	2	Genic_Genomic	ENSG00000266962.2	novel	2313	1	NA	NA	1670	19625	multi-exon	TRUE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCGGGGTGCGGTGGCT	1689	False	NA	NA	False	NA	NA	NA	42553078	42532810	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr17_-_42532839_42552438
H1_mix_00037604	chr17	-	2331	2	Genic_Genomic	ENSG00000266962.2	novel	2313	1	NA	NA	-29	6159	multi-exon	TRUE	canonical	3	89	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTTTGACCTTCTCCT	-10	True	NA	NA	False	AAAACA	-7	NA	42554777	42546276	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr17_-_42546398_42552567
H1_mix_00037605	chr17	-	2600	1	FSM	ENSG00000266962.2	ENST00000590513.2	2313	1	-50	-237	-50	237	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAAAGGACAGGGTTCGG	-31	True	NA	NA	False	CATAAA	-3	NA	42554798	42552198	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42552200_42554800
H1_mix_00037606	chr17	-	1355	8	FSM	ENSG00000131470.15	ENST00000393795.8	1355	8	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_7	87.357113654942	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGTGTTATACCTGCCT	-20	True	NA	-10	True	AATAAA	-17	NA	42577729	42572309	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42573025_42573106_42573167_42573310_42573365_42573477_42573624_42574098_42574211_42577212_42577303_42577460_42577562_42577652
H1_mix_00037607	chr17	-	1398	8	FSM	ENSG00000131470.15	ENST00000588544.5	902	8	123	-619	0	0	multi-exon	FALSE	canonical	1	4	junction_5	157.657598508118	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTATTTAGAAAAATAAAAAA	37	True	NA	-43	True	NA	NA	NA	42577672	42572342	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42573025_42573106_42573167_42573310_42573365_42573477_42573624_42574098_42574211_42577079_42577303_42577460_42577562_42577652
H1_mix_00037609	chr17	-	1381	7	FSM	ENSG00000131470.15	ENST00000587209.5	1381	7	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_4	71.0297277358024	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTATTTAGAAAAATAAAAAA	12	True	NA	-43	True	NA	NA	NA	42577697	42572342	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42573025_42573106_42573167_42573310_42573365_42573477_42573624_42574098_42574211_42577212_42577303_42577460
H1_mix_00037610	chr17	-	1948	7	FSM	ENSG00000131470.15	ENST00000589505.5	1244	7	-85	-619	-49	0	multi-exon	FALSE	canonical	3	246	junction_6	76.9431608396744	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTATTTAGAAAAATAAAAAA	2856	False	NA	-43	True	NA	NA	NA	42577880	42572342	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42573025_42573106_42573167_42573310_42573365_42573477_42574211_42577212_42577303_42577460_42577562_42577652
H1_mix_00037611	chr17	-	3757	9	FSM	ENSG00000141699.11	ENST00000309428.10	3749	9	0	-8	0	6	multi-exon	FALSE	canonical	3	189	junction_6	21.1035393950873	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGATGCTGAATGGTGT	0	True	NA	-29	True	AATAAA	-25	NA	42609374	42579506	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42582271_42582673_42582807_42583497_42583581_42585124_42585263_42586052_42586138_42586764_42586892_42587833_42587865_42592055_42592163_42609085
H1_mix_00037613	chr17	-	571	5	FSM	ENSG00000141699.11	ENST00000589007.5	571	5	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	15.7003184681076	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGACAATGGCACATTCAA	NA	False	NA	NA	False	NA	NA	NA	42586957	42582734	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42582807_42583497_42583581_42585124_42585263_42586052_42586138_42586764
H1_mix_00037617	chr17	-	4347	11	FSM	ENSG00000068137.15	ENST00000591490.5	4339	11	0	-8	0	5	multi-exon	FALSE	canonical	3	31	junction_2	16.8570460045644	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGGGAGTGTTATTCAG	6762	False	NA	NA	False	AAAAAG	-23	NA	42676897	42667908	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42670377_42670572_42670706_42671002_42671131_42671350_42671559_42672085_42672393_42673175_42673297_42673398_42673557_42673642_42673835_42673933_42674014_42674353_42674410_42676401
H1_mix_00037619	chr17	-	2987	13	FSM	ENSG00000068137.15	ENST00000293349.10	2987	13	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	24.7009896337958	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGTTTCTTA	-1	True	NA	NA	False	NA	NA	NA	42676994	42667943	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42668304_42669429_42669622_42669917_42670377_42670572_42670706_42671002_42671131_42671350_42671559_42672085_42672393_42673175_42673297_42673398_42673557_42673642_42673835_42673933_42674014_42674353_42674410_42676401
H1_mix_00037621	chr17	-	4689	21	FSM	ENSG00000108799.13	ENST00000428826.7	4633	21	-46	-10	-37	10	multi-exon	FALSE	canonical	3	24	junction_20	8.93084542470644	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTACTGTGTGCTTTGG	NA	False	NA	3	True	AATAAA	-24	NA	42745086	42700264	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42702593_42702876_42702962_42703739_42703821_42704601_42704684_42705087_42705184_42706006_42706186_42707957_42708084_42708875_42708917_42709845_42709938_42712288_42712486_42713208_42713390_42717975_42718068_42718453_42718618_42719104_42719208_42720272_42720450_42722794_42722916_42724304_42724425_42727634_42727764_42728824_42728953_42730827_42730919_42745010
H1_mix_00037622	chr17	-	2752	19	FSM	ENSG00000108799.13	ENST00000586103.5	2752	19	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_18	8.97819718492293	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	32	False	NA	NA	False	NA	NA	NA	42745015	42703192	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42703821_42704601_42704684_42705087_42705184_42706006_42706186_42707957_42708084_42708875_42708917_42709845_42709938_42712288_42712486_42713208_42713390_42717975_42718068_42718453_42718618_42719104_42719208_42720272_42720450_42722794_42722916_42724304_42724425_42727634_42727764_42728824_42728953_42730827_42730919_42745010
H1_mix_00037624	chr17	-	591	2	FSM	ENSG00000108799.13	ENST00000593148.1	591	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCACTGGCAACAAGACAGT	NA	False	NA	-93	True	NA	NA	NA	42719178	42718100	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42718618_42719104
H1_mix_00037626	chr17	-	270	1	FSM	ENSG00000214578.5	ENST00000585707.1	270	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTGTGTGCATTTTTGA	7522	False	NA	-99	True	AAAACA	-40	NA	42753799	42753529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42753500_42753800
H1_mix_00037627	chr17	-	1985	5	FSM	ENSG00000197291.9	ENST00000589716.5	1985	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	4.33012701892219	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTGGAGCAGTGTGAAG	64	False	NA	NA	False	NA	NA	NA	42761257	42753913	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42755214_42759738_42759881_42760425_42760514_42760634_42760712_42760879
H1_mix_00037628	chr17	-	795	3	NNC	ENSG00000183978.8	novel	780	2	NA	NA	0	31245	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	750.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGGGCATGGTGGCTC	-5	True	NA	NA	False	NA	NA	NA	42798704	42763901	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_42763926_42797633_42798168_42798467
H1_mix_00037629	chr17	-	780	2	FSM	ENSG00000183978.8	ENST00000328434.8	780	2	0	0	0	0	multi-exon	FALSE	canonical	3	1501	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGAGGCTGAGAGGCAG	-5	True	NA	-1	True	AATAAA	-28	NA	42798704	42797624	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42798168_42798467
H1_mix_00037630	chr17	-	1959	11	NIC	ENSG00000126581.13	novel	2112	12	NA	NA	0	12	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	201.51168700599	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGGTTTTTCTTTAAA	10	True	NA	0	True	AATAAA	-37	NA	42824263	42810121	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_42810929_42813947_42814009_42814523_42814674_42815907_42816055_42818220_42818416_42818543_42818681_42818786_42818878_42819547_42819610_42820773_42820842_42823747_42823880_42824154
H1_mix_00037631	chr17	-	2124	12	FSM	ENSG00000126581.13	ENST00000361523.8	2112	12	0	-12	0	12	multi-exon	FALSE	canonical	0	0	junction_7	173.838150241363	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGGTTTTTCTTTAAA	10	True	NA	0	True	AATAAA	-37	NA	42824263	42810121	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42810929_42811654_42811798_42813947_42814009_42814523_42814674_42815907_42816055_42818220_42818416_42818543_42818681_42818786_42818878_42819547_42819610_42820773_42820842_42823747_42823880_42824132
H1_mix_00037636	chr17	-	1499	6	FSM	ENSG00000126581.13	ENST00000586589.5	731	6	-30	-738	0	12	multi-exon	TRUE	canonical	3	107	junction_1	181.934713565059	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGGTTTTTCTTTAAA	5591	False	NA	0	True	AATAAA	-37	NA	42818682	42810121	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42810929_42813947_42814009_42814523_42814674_42815907_42816055_42818220_42818416_42818543
H1_mix_00037637	chr17	-	570	2	FSM	ENSG00000126581.13	ENST00000590852.1	570	2	0	0	0	0	multi-exon	FALSE	canonical	3	541	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTTTAAACATGGATTCAA	8302	False	NA	NA	False	AATAAA	-24	NA	42815971	42814167	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42814674_42815907
H1_mix_00037640	chr17	-	2783	7	NNC	ENSG00000108828.16	novel	2699	6	NA	NA	-51	97485	intron_retention	TRUE	non_canonical	0	0	junction_1	675.8948800582	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGGTGTGGTGGTGCGTG	NA	False	NA	NA	False	NA	NA	NA	43022436	42917121	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_42917154_43014605_43016145_43016306_43016549_43017840_43017931_43018035_43018207_43018591_43018800_43021935
H1_mix_00037642	chr17	-	1320	12	FSM	ENSG00000266967.7	ENST00000427569.7	1320	12	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_11	29.9740934974143	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGCGCTACCACTTGTA	4	True	NA	-31	True	AATAAA	-17	NA	42964454	42950525	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42950729_42951799_42951895_42953723_42953779_42954875_42954968_42955157_42955225_42955841_42955973_42956203_42956321_42956403_42956561_42957137_42957196_42961191_42961352_42964105_42964238_42964401
H1_mix_00037643	chr17	-	2143	17	FSM	ENSG00000108825.18	ENST00000421990.7	2150	17	27	-20	-11	0	multi-exon	FALSE	canonical	3	15	junction_11	133.940037306811	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGGTTGCGCTACCACT	790	False	NA	-35	True	AATAAA	-13	NA	42980501	42950529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42950729_42951799_42951895_42953723_42953779_42954875_42954968_42955157_42955225_42955841_42955973_42956203_42956321_42956403_42956561_42957137_42957196_42961191_42961352_42964105_42964238_42970288_42970343_42971606_42971697_42979169_42979269_42979377_42979445_42979549_42979664_42980045
H1_mix_00037647	chr17	-	1625	3	FSM	ENSG00000267060.7	ENST00000464183.1	748	3	61	-938	61	0	multi-exon	FALSE	canonical	3	22	junction_1	11.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTGCTCTTGAACTCAT	9198	False	NA	-13	True	AATAAA	-14	NA	42972093	42968102	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42969187_42970288_42970343_42971606
H1_mix_00037648	chr17	-	2013	7	FSM	ENSG00000267060.7	ENST00000591916.7	1543	7	-410	-60	-57	45	multi-exon	FALSE	canonical	3	22	junction_1	10.3077640640442	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATTTATGTTTGAGATA	801	False	NA	47	True	AGTAAA	-9	NA	42980490	42968042	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42969187_42970288_42970343_42971606_42971697_42979169_42979269_42979377_42979445_42979549_42979664_42980045
H1_mix_00037649	chr17	-	2699	6	FSM	ENSG00000108828.16	ENST00000355653.8	2699	6	0	0	0	0	multi-exon	FALSE	canonical	3	1736	junction_1	58.2237065120385	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCCTGCTTGTTGCCTCTG	-10	True	NA	-10	True	AATAAA	-14	NA	43022385	43014606	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_43016145_43016306_43016549_43017840_43017931_43018035_43018207_43018591_43018800_43021935
H1_mix_00037650	chr17	-	3752	23	NNC	ENSG00000012048.23	novel	2379	23	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_12	26.0831474042608	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCATGAATGACTGTTCTT	132	False	NA	-7	True	AATAAA	-19	NA	43125345	43044296	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_43045803_43047642_43047704_43049120_43049195_43051062_43051118_43057051_43057136_43063332_43063374_43063873_43063952_43067607_43067696_43070927_43071239_43074330_43074522_43076487_43076612_43082403_43082573_43090943_43091033_43094743_43094861_43095845_43095923_43097243_43097290_43099774_43099881_43104121_43104262_43104867_43104957_43106455_43106534_43115725_43115780_43124016_43124116_43125270
H1_mix_00037651	chr17	-	7088	23	FSM	ENSG00000012048.23	ENST00000357654.9	7088	23	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_22	19.7521836851164	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGAATGACTGTTCTTGA	14	True	NA	-5	True	AATAAA	-21	NA	43125364	43044294	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_43045803_43047642_43047704_43049120_43049195_43051062_43051118_43057051_43057136_43063332_43063374_43063873_43063952_43067607_43067696_43070927_43071239_43074330_43074522_43076487_43076615_43082403_43082576_43090943_43091033_43091434_43094861_43095845_43095923_43097243_43097290_43099774_43099881_43104121_43104262_43104867_43104957_43106455_43106534_43115725_43115780_43124016_43124116_43125270
H1_mix_00037652	chr17	-	2379	23	FSM	ENSG00000012048.23	ENST00000491747.6	2379	23	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_13	23.9239497554402	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAGCCAGCCACAGGTAC	22	True	NA	NA	False	NA	NA	NA	43125356	43045677	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_43045803_43047642_43047704_43049120_43049195_43051062_43051118_43057051_43057136_43063332_43063374_43063873_43063952_43067607_43067696_43070927_43071239_43074330_43074522_43076487_43076612_43082403_43082576_43090943_43091033_43094743_43094861_43095845_43095923_43097243_43097290_43099774_43099881_43104121_43104262_43104867_43104957_43106455_43106534_43115725_43115780_43124016_43124116_43125276
H1_mix_00037659	chr17	-	1133	5	FSM	ENSG00000188825.15	ENST00000662853.1	1388	5	255	0	-120	0	multi-exon	FALSE	canonical	0	0	junction_4	3.49106001094224	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCACTTCACTCTATAGTT	1152	False	NA	NA	False	AATAAA	-17	NA	43388057	43371086	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_43371427_43377670_43377814_43379122_43379263_43381272_43381661_43387935
H1_mix_00037660	chr17	-	2736	11	ISM	ENSG00000175832.13	ENST00000538265.5	2147	12	-97	1	-9	-1	intron_retention	FALSE	canonical	3	587	junction_7	26.9992592490979	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTCTCCTGTGTCCTCTT	319	False	NA	-5	True	AATAAA	-19	NA	43546034	43527844	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_43528744_43529134_43529237_43529503_43529677_43529883_43529953_43530106_43530182_43532673_43532940_43533186_43533349_43533858_43533986_43536425_43536480_43544974_43545023_43545273
H1_mix_00037665	chr17	-	4099	3	FSM	ENSG00000108861.9	ENST00000226004.8	4095	3	0	-4	0	4	multi-exon	FALSE	canonical	3	119	junction_1	4	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTTTTGTCCTTCTTA	-11	True	NA	NA	False	AATAAA	-21	NA	43778977	43766120	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_43769815_43774711_43774939_43778799
H1_mix_00037666	chr17	-	1292	4	NIC	ENSG00000108861.9	novel	4095	3	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	49.6051072639367	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTATTGTTTTTTTGTCCTT	-5	True	NA	NA	False	AATAAA	-17	NA	43778971	43766124	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_43766785_43769581_43769815_43774711_43774939_43778799
H1_mix_00037667	chr17	-	2186	19	FSM	ENSG00000161647.19	ENST00000496503.5	2186	19	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	4.04450549404473	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAAGTAGCCACTGTCTTT	-10	True	NA	3	True	ATTAAA	-39	NA	43833170	43801417	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_43801878_43808955_43809079_43810806_43810916_43811111_43811206_43814010_43814092_43814196_43814362_43816037_43816080_43818045_43818111_43820861_43821059_43823930_43824006_43825755_43825842_43827750_43827833_43829653_43829792_43830026_43830108_43831243_43831322_43831558_43831678_43831881_43831944_43832760_43832820_43833100
H1_mix_00037671	chr17	-	4255	13	NIC	ENSG00000108852.16	novel	3462	14	NA	NA	12	-5	combination_of_known_junctions	FALSE	canonical	1	2	junction_11	73.82425640217	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAAAGGCTTCTGGCTC	9080	False	NA	-12	True	ATTAAA	-5	NA	43900586	43875367	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_43877984_43879274_43879404_43879781_43879985_43880690_43880853_43881089_43881159_43881243_43881350_43881457_43881590_43882283_43882512_43882902_43883053_43883202_43883356_43884083_43884156_43898261_43898381_43900470
H1_mix_00037674	chr17	-	1525	4	FSM	ENSG00000091947.10	ENST00000206380.8	1525	4	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_3	6.34209919681348	163	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTTGCTTTTCTGTT	20	True	NA	0	True	AATAAA	-16	NA	44014963	44011187	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44012237_44013008_44013156_44014356_44014538_44014815
H1_mix_00037678	chr17	-	5326	27	FSM	ENSG00000108840.16	ENST00000225983.10	5326	27	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_25	77.1029435581123	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAATGTCTCTATTCTCTG	9	True	NA	0	True	AATAAA	-26	NA	44123638	44076745	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44078416_44078499_44078666_44078794_44078880_44079143_44079278_44080106_44080226_44080400_44080499_44080762_44080883_44082584_44082673_44082764_44082821_44083544_44083653_44083804_44083855_44084554_44084676_44085021_44085156_44086571_44086738_44087411_44087697_44088386_44088599_44091269_44091493_44091699_44091832_44092171_44092285_44092380_44092528_44092675_44092807_44093091_44093207_44093313_44093486_44093574_44093835_44110728_44110804_44117493_44117705_44123503
H1_mix_00037679	chr17	-	5326	27	FSM	ENSG00000108840.16	ENST00000682912.1	5319	27	0	-7	0	0	multi-exon	FALSE	canonical	3	228	junction_25	74.9307076354252	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAATGTCTCTATTCTCTG	6	True	NA	0	True	AATAAA	-26	NA	44123641	44076745	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44078416_44078499_44078666_44078794_44078880_44079143_44079278_44080106_44080226_44080400_44080499_44080762_44080883_44082584_44082673_44082764_44082821_44083544_44083653_44083804_44083855_44084554_44084676_44085021_44085156_44086571_44086738_44087411_44087697_44088386_44088599_44091269_44091493_44091699_44091832_44092171_44092285_44092380_44092528_44092675_44092807_44093091_44093207_44093313_44093486_44093574_44093835_44110728_44110801_44117493_44117705_44123503
H1_mix_00037683	chr17	-	927	3	FSM	ENSG00000267080.7	ENST00000588785.6	916	3	0	-11	0	11	multi-exon	FALSE	canonical	3	34	junction_1	6.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTCTGTCCCCACACTT	2	True	NA	-3	True	AATAAA	-17	NA	44186707	44175956	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44176643_44181622_44181721_44186564
H1_mix_00037685	chr17	-	2081	3	FSM	ENSG00000267080.7	ENST00000667684.1	1853	3	20	-248	0	0	multi-exon	FALSE	canonical	3	33	junction_1	7	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAGTTATAATATTTTCT	6	True	NA	-19	True	AATAAA	-1	NA	44186703	44175972	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44177817_44181622_44181721_44186564
H1_mix_00037688	chr17	-	4822	12	FSM	ENSG00000087152.16	ENST00000454077.6	3523	12	-1299	0	-163	0	multi-exon	FALSE	canonical	3	12	junction_7	40.2249870948004	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGGCCTACCTACTCTC	-11	True	NA	-16	True	AATAAA	-19	NA	44199369	44191804	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44194412_44194516_44194675_44194767_44194840_44195096_44195141_44195418_44195488_44195799_44195829_44196033_44196101_44196395_44196419_44196928_44197027_44197227_44197400_44197597_44197731_44198019
H1_mix_00037689	chr17	-	4619	13	NNC	ENSG00000087152.16	novel	3951	13	NA	NA	-163	0	intron_retention	FALSE	non_canonical	3	38	junction_1	32.3379507012358	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGGCCTACCTACTCTC	-11	True	NA	-16	True	AATAAA	-19	NA	44199369	44191804	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_44192432_44192613_44194412_44194516_44194675_44194767_44194840_44195096_44195141_44195418_44195488_44195799_44195829_44196033_44196080_44196395_44196419_44196928_44197027_44197227_44197400_44197597_44197731_44198019
H1_mix_00037691	chr17	-	4684	20	FSM	ENSG00000108312.15	ENST00000343638.9	4684	20	0	0	0	0	multi-exon	TRUE	canonical	3	113	junction_19	83.9887210472805	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTCTGGTCACTGGAA	1139	False	NA	-5	True	AATAAA	-20	NA	44220963	44205032	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44207368_44207453_44207598_44207698_44207771_44207863_44207912_44209351_44209542_44209644_44209734_44210123_44210235_44210317_44210474_44210791_44210948_44211038_44211153_44211289_44211332_44211605_44211748_44211872_44212007_44212818_44212940_44213217_44213283_44215653_44215810_44215905_44215990_44216528_44216705_44218171_44218297_44220739
H1_mix_00037692	chr17	-	4994	21	FSM	ENSG00000108312.15	ENST00000302904.8	4997	21	0	3	0	-3	multi-exon	FALSE	canonical	3	74	junction_20	99.1516389173674	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGCTGTCTGGTCACTG	476	False	NA	-8	True	AATAAA	-17	NA	44221626	44205035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44207368_44207453_44207598_44207698_44207771_44207863_44207912_44209351_44209542_44209644_44209734_44210123_44210235_44210317_44210474_44210791_44210948_44211038_44211153_44211289_44211332_44211605_44211748_44211872_44212007_44212343_44212455_44212818_44212940_44213217_44213283_44215653_44215810_44215905_44215990_44216528_44216705_44218171_44218297_44221200
H1_mix_00037693	chr17	-	4799	21	FSM	ENSG00000108312.15	ENST00000436088.6	4795	21	0	-4	0	-3	multi-exon	FALSE	canonical	3	156	junction_20	88.279938264591	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGCTGTCTGGTCACTG	-1	True	NA	-8	True	AATAAA	-17	NA	44219675	44205035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44207368_44207453_44207598_44207698_44207771_44207863_44207912_44209351_44209542_44209644_44209734_44210123_44210235_44210317_44210474_44210791_44210948_44211038_44211153_44211289_44211332_44211605_44211748_44211872_44212007_44212343_44212455_44212818_44212940_44213217_44213283_44215653_44215810_44215905_44215990_44216528_44216705_44218171_44218297_44219444
H1_mix_00037694	chr17	-	4787	20	NNC	ENSG00000108312.15	novel	4795	21	NA	NA	-25020	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_19	103.900495761043	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGACTGCTGTCTGGTC	3588	False	NA	-12	True	AATAAA	-13	NA	44246646	44205039	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_44207368_44207453_44207598_44207698_44207771_44207863_44207912_44209351_44209542_44209644_44209734_44210123_44210235_44210317_44210474_44210791_44210948_44211038_44211153_44211289_44211332_44211605_44211748_44211872_44212007_44212818_44212940_44213217_44213283_44215653_44215810_44215905_44215990_44216528_44216705_44218171_44218602_44246617
H1_mix_00037695	chr17	-	4938	21	NIC	ENSG00000108312.15	novel	4997	21	NA	NA	-146	-3	combination_of_known_junctions	FALSE	canonical	3	113	junction_20	93.713606269314	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGCTGTCTGGTCACTG	993	False	NA	-8	True	AATAAA	-17	NA	44221109	44205035	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_44207368_44207453_44207598_44207698_44207771_44207863_44207912_44209351_44209542_44209644_44209734_44210123_44210235_44210317_44210474_44210791_44210948_44211038_44211153_44211289_44211332_44211605_44211748_44211872_44212007_44212343_44212455_44212818_44212940_44213217_44213283_44215653_44215810_44215905_44215990_44216528_44216705_44218171_44218297_44220739
H1_mix_00037696	chr17	-	2683	20	FSM	ENSG00000108312.15	ENST00000393606.7	2683	20	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_19	77.2329641275177	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATACGG	2352	False	NA	NA	False	NA	NA	NA	44219750	44207115	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44207368_44207453_44207598_44207698_44207771_44207863_44207912_44209351_44209542_44209644_44209734_44210123_44210235_44210317_44210474_44210791_44210948_44211038_44211153_44211289_44211332_44211605_44211748_44211872_44212007_44212818_44212940_44213217_44213283_44215653_44215810_44215905_44215990_44216528_44216705_44218171_44218297_44219444
H1_mix_00037697	chr17	-	4812	20	FSM	ENSG00000108312.15	ENST00000529383.5	2570	20	-38	-2204	0	-3	multi-exon	FALSE	canonical	3	182	junction_14	75.9655848598725	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGCTGTCTGGTCACTG	17	True	NA	-8	True	AATAAA	-17	NA	44218540	44205035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44207368_44207453_44207598_44207698_44207771_44207863_44207912_44209351_44209542_44209644_44209734_44210123_44210235_44210317_44210474_44210791_44210948_44211038_44211153_44211289_44211332_44211605_44211748_44211872_44212007_44212343_44212455_44212818_44212940_44213217_44213283_44215653_44215810_44215905_44215990_44216528_44216705_44218171
H1_mix_00037698	chr17	-	2459	19	FSM	ENSG00000108312.15	ENST00000526094.5	2459	19	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_13	58.7473403653306	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCCCCACCCCAGGGCA	3600	False	NA	NA	False	NA	NA	NA	44218502	44207239	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44207368_44207453_44207598_44207698_44207771_44207863_44207912_44209351_44209542_44209644_44209734_44210123_44210235_44210317_44210474_44210791_44210948_44211038_44211153_44211289_44211332_44211605_44211748_44211872_44212007_44212818_44212940_44213217_44213283_44215653_44215810_44215905_44215990_44216528_44216705_44218171
H1_mix_00037700	chr17	-	1615	12	FSM	ENSG00000013306.16	ENST00000225308.12	1607	12	13	-21	13	21	multi-exon	FALSE	canonical	3	1599	junction_8	245.197542220031	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGTGGCTGGGAGGGA	1927	False	NA	NA	False	NA	NA	NA	44324857	44319603	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44320117_44320195_44320277_44320354_44320437_44320621_44320732_44321057_44321232_44321433_44321559_44321699_44321768_44322418_44322529_44322807_44322853_44323283_44323344_44323477_44323578_44324710
H1_mix_00037701	chr17	-	2217	10	FSM	ENSG00000013306.16	ENST00000591006.5	2217	10	0	0	0	0	multi-exon	FALSE	canonical	3	1599	junction_7	260.409411750795	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGTGCCTGTCCCTCTG	2637	False	NA	NA	False	NA	NA	NA	44324147	44319626	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44320117_44320195_44320277_44320354_44320437_44320621_44320732_44321057_44321559_44321699_44321768_44322418_44322529_44322807_44322853_44323283_44323344_44323477
H1_mix_00037702	chr17	-	1581	12	FSM	ENSG00000013306.16	ENST00000377095.10	1581	12	0	0	0	0	multi-exon	FALSE	canonical	3	609	junction_8	501.50864959623	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGCCTGTCCCTCT	-13	True	NA	NA	False	NA	NA	NA	44324823	44319627	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44320117_44320195_44320277_44320354_44320437_44320621_44320732_44321057_44321232_44321433_44321559_44321699_44321768_44322418_44322553_44322807_44322853_44323283_44323344_44323477_44323578_44324710
H1_mix_00037703	chr17	-	1556	12	FSM	ENSG00000013306.16	ENST00000590194.5	1542	12	0	-14	0	0	multi-exon	FALSE	canonical	3	36	junction_11	669.995263335915	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGCCTGTCCCTCT	1	True	NA	NA	False	NA	NA	NA	44324809	44319627	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44320117_44320195_44320277_44320354_44320437_44320621_44320732_44321057_44321232_44321433_44321559_44321699_44321768_44322418_44322529_44322807_44322853_44323283_44323344_44323477_44323591_44324710
H1_mix_00037704	chr17	-	867	4	FSM	ENSG00000013306.16	ENST00000592372.5	867	4	0	0	0	0	multi-exon	FALSE	canonical	3	2127	junction_2	185.217589757441	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGCCTGGTGTAGTCTC	5637	False	NA	NA	False	NA	NA	NA	44321147	44319690	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44320117_44320195_44320437_44320621_44320732_44321057
H1_mix_00037705	chr17	-	1274	11	FSM	ENSG00000013306.16	ENST00000537904.6	1274	11	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_8	685.35174180854	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCAGGGCTGTCCCTCTGG	-17	True	NA	NA	False	GGGGCT	-32	NA	44324827	44319869	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44320117_44320195_44320277_44320354_44320437_44320621_44320732_44321057_44321232_44321433_44321559_44321699_44321768_44322418_44322529_44323283_44323344_44323477_44323578_44324710
H1_mix_00037708	chr17	-	1121	7	FSM	ENSG00000013306.16	ENST00000585695.5	1121	7	0	0	0	0	multi-exon	FALSE	canonical	3	1599	junction_3	277.01128135872	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTTCTCATCTGTGAAGT	-17	True	NA	NA	False	NA	NA	NA	44324827	44320937	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44321559_44321699_44321768_44322418_44322529_44322807_44322853_44323283_44323344_44323477_44323578_44324710
H1_mix_00037712	chr17	-	3139	8	FSM	ENSG00000161682.15	ENST00000293443.12	3138	8	0	-1	0	1	multi-exon	FALSE	canonical	3	233	junction_5	13.1024222717693	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTATGTCTTTCTGTG	0	True	NA	-2	True	TATAAA	-16	NA	44363853	44353213	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44355192_44355714_44355842_44355957_44356075_44356172_44356353_44356429_44356589_44359578_44359672_44359904_44360133_44363596
H1_mix_00037714	chr17	-	497	3	FSM	ENSG00000005961.19	ENST00000587295.5	496	3	0	-1	0	0	multi-exon	FALSE	canonical	3	9	junction_1	23.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGCATGCTGCCTCCTT	9171	False	NA	-35	True	AATAAA	-17	NA	44376184	44372179	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44372424_44375832_44375986_44376084
H1_mix_00037715	chr17	-	2618	25	FSM	ENSG00000005961.19	ENST00000648408.1	2618	25	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	9.90370301116372	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGCATGCTGCCTCCTT	15	True	NA	-35	True	AATAAA	-17	NA	44385340	44372179	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44372424_44374658_44374761_44374997_44375112_44375590_44375717_44375832_44375986_44376084_44376185_44376307_44376389_44377008_44377089_44377697_44377791_44378361_44378510_44378642_44378711_44379688_44379815_44380001_44380154_44380245_44380302_44380385_44380491_44380599_44380646_44380878_44381062_44383492_44383705_44383893_44383947_44384084_44384139_44384310_44384355_44384537_44384586_44384947_44385077_44385163_44385210_44385285
H1_mix_00037716	chr17	-	2735	26	ISM	ENSG00000005961.19	ENST00000262407.6	3479	30	4308	0	0	0	3prime_fragment	FALSE	canonical	3	14	junction_19	8.88540376122548	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGCATGCTGCCTCCT	14	True	NA	-36	True	AATAAA	-16	NA	44385341	44372180	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_44372424_44374353_44374471_44374658_44374761_44374997_44375112_44375590_44375717_44375832_44375986_44376084_44376185_44376307_44376389_44377008_44377089_44377697_44377791_44378361_44378510_44378642_44378711_44379688_44379815_44380001_44380154_44380245_44380302_44380385_44380491_44380599_44380646_44380878_44381062_44383492_44383705_44383893_44383947_44384084_44384139_44384310_44384355_44384537_44384586_44384947_44385077_44385163_44385210_44385285
H1_mix_00037718	chr17	-	6839	8	FSM	ENSG00000186566.13	ENST00000591680.6	6832	8	0	-7	0	7	multi-exon	TRUE	canonical	3	101	junction_2	15.7997675002268	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTGTCGTAATTGTTGC	-12	True	NA	3	True	AATAAA	-25	NA	44503406	44395273	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44401454_44405920_44406052_44424348_44424493_44435064_44435152_44436477_44436546_44464471_44464545_44474828_44474904_44503325
H1_mix_00037719	chr17	-	5747	9	FSM	ENSG00000186566.13	ENST00000587228.5	4713	9	-192	-842	-166	0	multi-exon	FALSE	canonical	3	7	junction_7	50.3039200758748	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATATTTGTTTTCTGCT	6	True	NA	-33	True	TATAAA	-15	NA	44503596	44396573	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44401454_44405920_44406052_44424348_44424493_44435064_44435152_44436477_44436546_44464471_44464545_44467096_44467115_44474828_44474904_44503325
H1_mix_00037720	chr17	-	650	3	FSM	ENSG00000186566.13	ENST00000592154.1	650	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	72	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGCAGGCGCCTGTAGTC	172	False	NA	NA	False	NA	NA	NA	44503430	44473289	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44473760_44474828_44474904_44503325
H1_mix_00037723	chr17	-	2114	5	FSM	ENSG00000180329.14	ENST00000315286.13	2114	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	122.7202102345	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTCTGACTTATTTTGA	-4	True	NA	-9	True	AATAAA	-40	NA	44689776	44677439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44679044_44680584_44680644_44682002_44682139_44683871_44683960_44689549
H1_mix_00037724	chr17	-	2058	4	FSM	ENSG00000180329.14	ENST00000457422.6	2058	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	138.843637072628	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTCTGACTTATTTTGA	-7	True	NA	-9	True	AATAAA	-40	NA	44689779	44677439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44679044_44682002_44682139_44683871_44683960_44689549
H1_mix_00037725	chr17	-	692	3	FSM	ENSG00000180329.14	ENST00000592333.1	692	3	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_1	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATACAATATAGCTGTA	126	False	NA	NA	False	AAAACA	-38	NA	44689745	44681730	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44682139_44683871_44683960_44689549
H1_mix_00037727	chr17	-	4335	28	FSM	ENSG00000108883.13	ENST00000426333.7	4326	28	0	-9	0	9	multi-exon	TRUE	canonical	3	817	junction_16	99.9256513737545	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCATGATTTTTCTCAC	-21	True	NA	NA	False	NA	NA	NA	44899445	44849938	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44851370_44851709_44851818_44852408_44852563_44853295_44853391_44853516_44853636_44854268_44854357_44854555_44854683_44854917_44855005_44857074_44857158_44859079_44859182_44859904_44860046_44860431_44860544_44862712_44862907_44863654_44863783_44864929_44865066_44867806_44867898_44868286_44868351_44872445_44872571_44875933_44876101_44879555_44879639_44880553_44880645_44881686_44881723_44883092_44883159_44883648_44883725_44885255_44885335_44886584_44886751_44894416_44894526_44899368
H1_mix_00037728	chr17	-	3638	17	FSM	ENSG00000108883.13	ENST00000590367.5	3638	17	0	0	0	0	multi-exon	FALSE	canonical	3	817	junction_15	95.3644120925097	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTGTCTTGCTCTGCTC	NA	False	NA	-112	True	NA	NA	NA	44873167	44850915	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44851370_44851709_44851818_44852408_44852563_44853295_44853391_44853516_44854357_44854555_44854683_44854917_44855005_44857074_44857158_44859079_44859182_44859904_44860046_44860431_44860544_44862712_44862907_44863654_44863783_44864929_44865066_44867806_44867898_44868286_44868351_44872445
H1_mix_00037731	chr17	-	5751	1	FSM	ENSG00000131095.14	ENST00000638921.1	2617	1	98	-3232	-15	760	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGACGTCTCGGGCTGG	8767	False	NA	NA	False	NA	NA	NA	44908149	44902398	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44902400_44908100
H1_mix_00037733	chr17	-	2854	8	NIC	ENSG00000186185.14	novel	4217	15	NA	NA	1178	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_1	45.13110154351	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTCTCTCTGTACA	3436	False	NA	-2	True	AATAAA	-17	NA	44932798	44924708	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_44926187_44926413_44926500_44926988_44927079_44928025_44928579_44928818_44929025_44931601_44931730_44932055_44932243_44932672
H1_mix_00037734	chr17	-	4387	15	FSM	ENSG00000186185.14	ENST00000587309.5	4217	15	-98	-72	38	72	multi-exon	TRUE	canonical	3	149	junction_6	15.5964739604822	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGAAACTTCTGAGTATA	-19	True	NA	70	True	NA	NA	NA	44947735	44924636	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44926500_44926988_44927079_44928025_44928579_44928818_44929025_44931601_44931730_44932055_44932243_44932672_44932774_44932911_44932987_44933922_44934100_44934232_44934431_44934506_44934618_44934830_44934936_44935258_44935417_44936031_44936359_44947627
H1_mix_00037735	chr17	-	4078	16	FSM	ENSG00000186185.14	ENST00000593135.6	4088	16	12	-2	12	0	multi-exon	FALSE	canonical	3	12	junction_7	53.4742305539157	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTCTCTCTGTACA	-45	True	NA	-2	True	AATAAA	-17	NA	44947761	44924708	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44926187_44926413_44926500_44926988_44927079_44928025_44928579_44928818_44929025_44931601_44931730_44932055_44932207_44932672_44932774_44932911_44932987_44933922_44934100_44934232_44934431_44934506_44934618_44934830_44934936_44935258_44935417_44936031_44936359_44947627
H1_mix_00037739	chr17	-	2352	4	FSM	ENSG00000172992.13	ENST00000692009.1	2452	4	102	-2	102	0	multi-exon	FALSE	canonical	3	139	junction_1	18.7853370714738	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCAGACTTGGCTTCTTC	NA	False	NA	-8	True	AATAAA	-36	NA	45035446	45023337	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_45024725_45030091_45030180_45034186_45034391_45034773
H1_mix_00037740	chr17	-	2153	5	FSM	ENSG00000172992.13	ENST00000651974.1	2171	5	22	-4	5	0	multi-exon	FALSE	canonical	0	0	junction_4	72.1504504490443	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCCAGACTTGGCTTCT	11	True	NA	-10	True	AATAAA	-34	NA	45051610	45023339	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_45024725_45030091_45030180_45034186_45034391_45034773_45035000_45051360
H1_mix_00037743	chr17	-	2041	5	FSM	ENSG00000172992.13	ENST00000342350.10	2149	5	113	-5	8	5	multi-exon	FALSE	canonical	3	46	junction_4	52.9356921178896	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTGGCTTCTTCCCACA	-6	True	NA	-3	True	AATAAA	-41	NA	45061018	45023332	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_45024725_45030091_45030180_45034186_45034391_45034773_45035000_45060887
H1_mix_00037745	chr17	-	6132	15	FSM	ENSG00000161714.12	ENST00000619929.5	6132	15	0	0	0	0	multi-exon	TRUE	canonical	3	33	junction_6	5.9714456595791	709	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATTTGGTATTTCCTCCC	-3	True	NA	NA	False	NA	NA	NA	45132515	45108958	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_45112705_45112862_45113013_45113121_45113258_45113438_45113606_45114249_45114367_45115093_45115245_45115343_45115491_45116631_45116785_45117993_45118139_45118290_45118493_45118814_45119044_45120324_45120455_45120901_45121131_45121210_45121373_45132247
H1_mix_00037746	chr17	-	295	2	FSM	ENSG00000233483.3	ENST00000589518.1	393	2	98	0	98	0	multi-exon	FALSE	canonical	2	9	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGGGCTGGGGCTTGCGG	598	False	NA	0	True	TATAAA	-21	NA	45247745	45247266	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_45247517_45247700
H1_mix_00037747	chr17	-	4442	16	FSM	ENSG00000006062.18	ENST00000344686.8	4442	16	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_6	4.09661106552992	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGGTGTCCTCTCTCTTGCC	17	True	NA	2	True	AATAAA	-32	NA	45317020	45263118	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_45264801_45265162_45265264_45266536_45266682_45267091_45267199_45267405_45267760_45270412_45270564_45271057_45271222_45273502_45273608_45274122_45274255_45274463_45274594_45284811_45284950_45286430_45287046_45287153_45287365_45289235_45289306_45290489_45290766_45316959
H1_mix_00037749	chr17	-	4238	17	FSM	ENSG00000159314.12	ENST00000428638.5	4242	17	0	4	0	2	multi-exon	TRUE	canonical	2	6	junction_16	11.2583302491977	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACAAATGTGTCTTGATA	2627	False	NA	-5	True	AATAAA	-21	NA	45430297	45393905	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_45395634_45395743_45395850_45395982_45396118_45396206_45396285_45396486_45396586_45396667_45396791_45396915_45397025_45397948_45398048_45402713_45402819_45403618_45403710_45404028_45404097_45404268_45404335_45404444_45404529_45404600_45404682_45404923_45405107_45405675_45406084_45429622
H1_mix_00037751	chr17	-	969	8	FSM	ENSG00000159314.12	ENST00000524404.5	969	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	16.0661896222966	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGGCGGGGTTGGGGA	7308	False	NA	NA	False	NA	NA	NA	45425616	45402713	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_45402819_45403618_45403710_45404028_45404097_45404444_45404529_45404600_45404682_45405027_45405107_45405675_45406084_45425563
H1_mix_00037760	chr17	-	5356	14	FSM	ENSG00000120071.15	ENST00000638275.1	5352	14	0	-4	0	3	multi-exon	FALSE	canonical	3	15	junction_5	29.283757640345	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTACCAGGCCTTTCTTG	70	False	NA	-11	True	AATAAA	-20	NA	46193400	46029912	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_46031704_46032046_46032300_46033079_46033193_46033402_46033461_46034160_46034283_46038537_46038687_46039701_46039885_46050532_46050705_46066536_46066733_46067548_46067668_46082440_46082543_46094559_46094702_46170854_46172233_46192822
H1_mix_00037761	chr17	-	5578	15	FSM	ENSG00000120071.15	ENST00000432791.7	5574	15	0	-4	0	4	multi-exon	FALSE	canonical	3	35	junction_14	18.5248041108925	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTACCAGGCCTTTCTTGA	-4	True	NA	-10	True	AATAAA	-21	NA	46193429	46029911	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_46031704_46032046_46032300_46033079_46033193_46033402_46033461_46034160_46034286_46038537_46038687_46039026_46039216_46039701_46039885_46050532_46050705_46066536_46066733_46067548_46067668_46082440_46082543_46094559_46094702_46170854_46172233_46192822
H1_mix_00037764	chr17	-	4945	15	NIC	ENSG00000120071.15	novel	4935	15	NA	NA	1	3	combination_of_known_junctions	FALSE	canonical	3	32	junction_6	23.6958835656994	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTACCAGGCCTTTCTTG	-7	True	NA	-11	True	AATAAA	-20	NA	46225370	46029912	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_46031704_46032046_46032300_46033079_46033193_46033402_46033461_46034160_46034286_46038537_46038687_46039701_46039885_46050532_46050705_46066536_46066733_46067548_46067668_46082440_46082543_46094559_46094702_46170854_46172233_46223670_46223805_46225340
H1_mix_00037765	chr17	-	5151	16	FSM	ENSG00000120071.15	ENST00000574590.6	5147	16	0	-4	0	4	multi-exon	FALSE	canonical	3	15	junction_5	26.6094385927667	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTACCAGGCCTTTCTTGA	NA	False	NA	-10	True	AATAAA	-21	NA	46225389	46029911	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_46031704_46032046_46032300_46033079_46033193_46033402_46033461_46034160_46034283_46038537_46038687_46039026_46039216_46039701_46039885_46050532_46050705_46066536_46066733_46067548_46067668_46082440_46082543_46094559_46094702_46170854_46172233_46223670_46223805_46225340
H1_mix_00037766	chr17	-	5846	16	NIC	ENSG00000120071.15	novel	5147	16	NA	NA	50	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_15	17.40676752173	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGTACCAGGCCTTTC	58	False	NA	-14	True	AATAAA	-17	NA	46225305	46029915	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_46031704_46032046_46032300_46033079_46033193_46033402_46033461_46034160_46034286_46038537_46038687_46039026_46039216_46039701_46039885_46050532_46050705_46066536_46066733_46067548_46067668_46082440_46082543_46094559_46094702_46170854_46172233_46223670_46223805_46224560
H1_mix_00037771	chr17	-	2495	1	FSM	ENSG00000262539.1	ENST00000571422.1	1056	1	-924	-515	-924	515	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATAGG	NA	False	NA	NA	False	AGTAAA	-16	NA	46261530	46259035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_46259000_46261500
H1_mix_00037773	chr17	-	731	5	FSM	ENSG00000228696.10	ENST00000575960.5	731	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	63.974115859463	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGCTGTCAAAAAAGAAGAG	27	False	NA	NA	False	NA	NA	NA	46361718	46330452	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_46330599_46339508_46339775_46352819_46352931_46358249_46358415_46361675
H1_mix_00037774	chr17	-	5240	4	FSM	ENSG00000228696.10	ENST00000450673.4	5240	4	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	24.0878023535196	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGTTATATTGTACT	NA	False	NA	NA	False	AATAAA	-24	NA	46361766	46334901	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_46339775_46352819_46352931_46358249_46358415_46361675
H1_mix_00037775	chr17	-	2645	5	NNC	ENSG00000185829.18	novel	5242	4	NA	NA	-1	1791	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	63.5703350628263	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACTTAATGTAACAATTTA	23	False	NA	NA	False	AATAAA	-15	NA	46579658	46546415	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_46548461_46557364_46557631_46570758_46570870_46576174_46576340_46579600
H1_mix_00037776	chr17	-	5263	4	FSM	ENSG00000185829.18	ENST00000336125.6	5242	4	0	-21	0	21	multi-exon	FALSE	canonical	3	120	junction_1	23.6220236220354	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTGTATTTTTATTGG	NA	False	NA	NA	False	AATAAA	-45	NA	46579691	46552734	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_46557631_46570758_46570870_46576174_46576340_46579600
H1_mix_00037781	chr17	-	8706	2	FSM	ENSG00000262879.6	ENST00000658121.1	8712	2	6	0	-3	0	multi-exon	FALSE	canonical	3	7	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTAGCACCTCTGATCTT	3	True	NA	NA	False	NA	NA	NA	47067528	47048162	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_47056754_47067413
H1_mix_00037782	chr17	-	5940	3	FSM	ENSG00000262879.6	ENST00000573341.6	5940	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	5.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGAACTTATTTTGTGAG	24	True	NA	NA	False	NA	NA	NA	47100248	47051315	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_47056754_47072471_47072560_47099834
H1_mix_00037786	chr17	-	1424	2	FSM	ENSG00000262879.6	ENST00000574741.1	836	2	-48	-540	2	540	multi-exon	FALSE	canonical	3	3	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATACTTAAAAAATGAATAT	-15	True	NA	NA	False	TATAAA	-40	NA	47100287	47081379	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_47082351_47099834
H1_mix_00037787	chr17	-	5863	19	FSM	ENSG00000004897.12	ENST00000531206.5	3177	19	-137	-2549	-18	-3	multi-exon	FALSE	canonical	3	21	junction_11	39.0654721091543	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGGTAATTTTTAGAATA	20	False	47189333	-7	True	AATAAA	-15	NA	47189313	47117705	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_47121018_47122443_47122601_47123885_47123961_47129392_47129522_47132256_47132375_47137151_47137361_47138738_47138892_47141852_47142026_47142228_47142437_47143882_47143983_47151805_47151937_47154671_47154787_47156912_47157125_47157229_47157385_47158205_47158304_47169916_47170043_47171916_47172065_47181561_47181638_47189145
H1_mix_00037788	chr17	-	5830	19	FSM	ENSG00000004897.12	ENST00000066544.8	5830	19	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_8	28.8009880660412	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAATTTTTAGAATACCT	-14	True	NA	-4	True	AATAAA	-18	NA	47189295	47117702	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_47121018_47122443_47122601_47123885_47123961_47129392_47129522_47132256_47132375_47137151_47137361_47138738_47138892_47141852_47142026_47142228_47142437_47143882_47143983_47151805_47151919_47154671_47154787_47156912_47157125_47157229_47157385_47158205_47158304_47169916_47170043_47171916_47172065_47181561_47181638_47189145
H1_mix_00037790	chr17	-	5780	19	FSM	ENSG00000004897.12	ENST00000527547.5	2579	19	-27	-3174	0	-3	multi-exon	FALSE	canonical	3	93	junction_8	23.1882393562867	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGGTAATTTTTAGAATA	30	True	NA	-7	True	AATAAA	-15	NA	47189251	47117705	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_47121018_47122443_47122601_47123885_47123961_47129392_47129522_47132256_47132375_47137151_47137361_47138738_47138892_47141852_47142023_47142228_47142437_47143882_47143983_47151805_47151919_47154671_47154787_47156912_47157125_47157229_47157385_47158205_47158304_47169916_47170043_47171916_47172065_47181561_47181638_47189145
H1_mix_00037791	chr17	-	915	6	FSM	ENSG00000228782.8	ENST00000425159.7	927	6	12	0	-3	0	multi-exon	FALSE	canonical	0	0	junction_1	63.5188161098741	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACACAAAACAAAAAAGAAAG	11	False	NA	NA	False	NA	NA	NA	47492480	47450567	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_47450879_47456683_47456794_47482991_47483091_47490165_47490296_47491014_47491193_47492393
H1_mix_00037793	chr17	-	714	4	FSM	ENSG00000228782.8	ENST00000691039.1	736	4	16	6	1	-6	multi-exon	FALSE	canonical	3	22	junction_1	64.8913622055269	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACCTTCCTGCTTAGAAC	15	False	NA	-6	True	AATAAA	-15	NA	47492476	47488632	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_47488956_47490165_47490296_47491014_47491193_47492393
H1_mix_00037794	chr17	-	483	4	FSM	ENSG00000263766.6	ENST00000584391.6	786	4	-114	417	-114	-417	multi-exon	FALSE	canonical	3	14	junction_1	7.78888096369861	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCAATGGCGGCACCTCAG	559	False	NA	NA	False	NA	NA	NA	47649563	47621943	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_47622088_47626546_47626628_47636511_47636602_47649395
H1_mix_00037795	chr17	-	3695	22	NIC	ENSG00000006025.12	novel	3664	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	12	junction_10	4.52105179101635	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGCCTGTGACCATTCA	9787	False	NA	-5	True	AATAAA	-13	NA	47821741	47807371	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_47808400_47808537_47808661_47808863_47808991_47809075_47809221_47809333_47809479_47810593_47810673_47810771_47810836_47813265_47813404_47813586_47813835_47814520_47814615_47815214_47815353_47816106_47816203_47816387_47816483_47816562_47816873_47817255_47817360_47818268_47818387_47818505_47818617_47818985_47819100_47819728_47819783_47819970_47820097_47820203_47820366_47821665
H1_mix_00037796	chr17	-	430	4	FSM	ENSG00000006025.12	ENST00000578461.1	430	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	9.28559218478941	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGGGCTCCCCGCCTCAC	1477	False	NA	NA	False	NA	NA	NA	47809115	47808215	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_47808400_47808537_47808661_47808863_47808947_47809075
H1_mix_00037798	chr17	-	1830	5	FSM	ENSG00000159111.13	ENST00000351111.7	1749	5	11	-92	0	92	multi-exon	FALSE	canonical	3	591	junction_4	77.5258021564434	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCATGCAAGTCTTCATG	-2	True	NA	89	True	NA	NA	NA	47831530	47823179	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_47824459_47826636_47826782_47827039_47827205_47828500_47828671_47831459
H1_mix_00037799	chr17	-	1854	5	FSM	ENSG00000159111.13	ENST00000290208.11	2013	5	159	0	159	0	multi-exon	FALSE	canonical	3	16	junction_4	307.564932168802	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCCTTTATTTTGTGGTT	2014	False	NA	-22	True	AATAAA	-15	NA	47829514	47823460	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_47824459_47826636_47826782_47827039_47827205_47828500_47828671_47829138
H1_mix_00037800	chr17	-	1622	6	FSM	ENSG00000159111.13	ENST00000414011.1	1622	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	346.027397759195	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGCTTTATAATAAAATGAA	-6	True	NA	-51	True	NA	NA	NA	47831534	47823489	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_47824459_47826636_47826782_47827039_47827205_47828500_47828671_47829138_47829237_47831459
H1_mix_00037803	chr17	-	1767	7	FSM	ENSG00000141295.14	ENST00000584123.5	1745	7	0	-22	0	7	multi-exon	FALSE	canonical	3	239	junction_1	42.3034671549902	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTTTATCCCAGGACCA	9991	False	NA	-8	True	AATAAA	-22	NA	47841173	47837684	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_47838003_47838269_47838451_47838530_47838697_47838790_47839007_47839443_47839644_47840190_47840373_47840669
H1_mix_00037806	chr17	-	1773	7	FSM	ENSG00000141295.14	ENST00000407215.7	1779	7	13	-7	-3	7	multi-exon	FALSE	canonical	3	222	junction_6	48.5168928198096	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTTTATCCCAGGACCA	-1	True	NA	-8	True	AATAAA	-22	NA	47841276	47837684	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_47838451_47838530_47838697_47838790_47839007_47839443_47839644_47840190_47840373_47840669_47840844_47841207
H1_mix_00037814	chr17	-	514	3	FSM	ENSG00000264920.3	ENST00000691236.1	557	3	36	7	-5	0	multi-exon	FALSE	canonical	3	19	junction_2	2	198	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCATAACTGGTGCTGT	457	False	NA	NA	False	AAAAAG	-35	NA	47895801	47891225	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_47891582_47893899_47893959_47895702
H1_mix_00037815	chr17	-	1503	2	FSM	ENSG00000167183.3	ENST00000300557.3	1524	2	21	0	21	0	multi-exon	FALSE	canonical	3	4	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTCCTTTCAAGCTTCAG	-5	True	NA	NA	False	AGTAAA	-20	NA	47957862	47951966	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_47953264_47957656
H1_mix_00037816	chr17	-	911	9	FSM	ENSG00000005243.10	ENST00000621465.5	914	9	3	0	3	0	multi-exon	FALSE	canonical	0	0	junction_1	0.484122918275927	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTCTCCTTCTCTCTTGGC	-9	True	NA	NA	False	AATAAA	-22	NA	48037794	48026166	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_48026476_48028471_48028511_48029124_48029177_48032155_48032234_48032685_48032742_48033210_48033303_48033862_48033945_48036850_48036926_48037666
H1_mix_00037817	chr17	-	2436	5	FSM	ENSG00000108468.15	ENST00000393408.7	2422	5	0	-14	0	14	multi-exon	FALSE	canonical	3	6	junction_4	251.1527174848	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACCAGGAACCCTTCTTG	-14	True	NA	7	True	AATAAA	-37	NA	48101198	48070037	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_48071580_48075005_48075101_48076000_48076179_48076864_48077042_48100754
H1_mix_00037819	chr17	-	362	2	FSM	ENSG00000159182.5	ENST00000290294.5	382	2	13	7	13	-7	multi-exon	FALSE	canonical	3	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAACTGGGTGAAAGTT	6689	False	NA	NA	False	AATAAA	-13	NA	48722505	48721725	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_48721900_48722317
H1_mix_00037820	chr17	-	578	5	FSM	ENSG00000170703.16	ENST00000509809.1	578	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0.866025403784439	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTGTACAATGAAGGACT	987	False	NA	NA	False	NA	NA	NA	48803986	48797129	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_48797205_48799603_48799761_48801254_48801386_48801524_48801644_48803890
H1_mix_00037822	chr17	-	2091	8	FSM	ENSG00000159210.10	ENST00000502492.6	2044	8	-12	-35	-12	35	multi-exon	FALSE	canonical	3	1502	junction_5	90.047153180533	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACTGACTGCCAGAGCAT	4664	False	NA	NA	False	NA	NA	NA	48944854	48929280	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_48930613_48931642_48931718_48933204_48933347_48936169_48936243_48937019_48937125_48940923_48941063_48943924_48943976_48944680
H1_mix_00037823	chr17	-	951	8	FSM	ENSG00000159210.10	ENST00000290330.7	951	8	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_2	534.014828197396	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTCTTTCTTCCCTCAT	3	True	NA	29	True	AATAAA	-45	NA	48944810	48930373	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_48930613_48931642_48931715_48933204_48933347_48936169_48936243_48937019_48937125_48940923_48941063_48943924_48943976_48944680
H1_mix_00037827	chr17	-	462	2	FSM	ENSG00000159210.10	ENST00000506104.1	455	2	0	-7	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAAACAAACAAAAAA	7706	False	NA	NA	False	NA	NA	NA	48937107	48936033	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_48936243_48936854
H1_mix_00037828	chr17	-	823	3	FSM	ENSG00000159210.10	ENST00000515174.5	823	3	0	0	0	0	multi-exon	FALSE	canonical	3	1502	junction_1	49	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTGTTCCCTAAAATGT	5379	False	NA	NA	False	NA	NA	NA	48944139	48936655	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_48937125_48940923_48941063_48943924
H1_mix_00037829	chr17	-	333	3	NNC	ENSG00000159224.4	novel	716	6	NA	NA	6963	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGCATGTTTGTCTTTGT	6961	False	NA	-1	True	ATTAAA	-19	NA	48961633	48958553	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_48958717_48960885_48960988_48961565
H1_mix_00037830	chr17	-	458	3	NNC	ENSG00000250838.1	novel	428	3	NA	NA	523	16	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	9	175	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAATATTTTCTGTCCAAG	NA	False	NA	8	True	ATTAAA	-32	NA	48996969	48995249	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_48995583_48996417_48996492_48996918
H1_mix_00037832	chr17	-	5683	1	ISM	ENSG00000198740.9	ENST00000430262.3	11628	6	67355	7	-5035	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATATCCCCTGTGTGTC	1040	False	NA	NA	False	AGTAAA	-17	NA	49294895	49289212	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_49289200_49294900
H1_mix_00037833	chr17	-	11626	6	FSM	ENSG00000198740.9	ENST00000430262.3	11628	6	0	2	0	0	multi-exon	FALSE	canonical	3	13	junction_1	3.89871773792359	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCCCTGTGTGTCTTTCT	-8	True	NA	NA	False	AGTAAA	-22	NA	49362250	49289207	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_49298925_49311311_49311457_49311926_49312043_49312697_49312846_49316825_49317984_49361908
H1_mix_00037834	chr17	-	1847	7	FSM	ENSG00000167085.13	ENST00000511832.6	1847	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1410.68738170046	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGGGTTGGTTTTTTGT	94	False	NA	-12	True	AATAAA	-24	NA	49414802	49404051	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_49405205_49406758_49406855_49409041_49409159_49409330_49409474_49411677_49411840_49413176_49413292_49414741
H1_mix_00037835	chr17	-	1834	7	FSM	ENSG00000167085.13	ENST00000300408.8	1834	7	0	0	0	0	multi-exon	FALSE	canonical	3	3120	junction_6	286.33119906073	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGGGTTGGTTTTTTGT	-1	True	NA	-12	True	AATAAA	-24	NA	49414882	49404051	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_49405205_49406758_49406855_49409041_49409159_49409330_49409474_49411677_49411840_49413176_49413292_49414834
H1_mix_00037836	chr17	-	1885	7	FSM	ENSG00000167085.13	ENST00000617874.5	1885	7	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_6	1361.07224887831	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCAGACCTTCCGGCTCA	38	False	NA	-32	True	AATAAA	-4	NA	49414858	49404071	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_49405205_49406758_49406855_49409041_49409159_49409330_49409474_49411677_49411840_49413176_49413292_49414739
H1_mix_00037837	chr17	-	1899	7	FSM	ENSG00000167085.13	ENST00000504124.6	1899	7	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_6	1403.28067993066	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCAGACCTTCCGGCTCA	5	True	NA	-32	True	AATAAA	-4	NA	49414876	49404071	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_49405205_49406758_49406855_49409041_49409159_49409330_49409474_49411677_49411840_49413176_49413292_49414743
H1_mix_00037838	chr17	-	1908	8	FSM	ENSG00000167085.13	ENST00000614445.5	1908	8	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_7	1533.3864483554	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCAGACCTTCCGGCTCA	-3	True	NA	-32	True	AATAAA	-4	NA	49414884	49404071	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_49405205_49406758_49406855_49409041_49409159_49409330_49409474_49411677_49411840_49413176_49413292_49414241_49414334_49414834
H1_mix_00037839	chr17	-	654	1	FSM	ENSG00000229944.3	ENST00000422816.1	654	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGACACCTTCTGAGTATT	9	False	NA	NA	False	ACTAAA	-19	NA	49424922	49424268	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_49424300_49424900
H1_mix_00037841	chr17	-	3008	11	FSM	ENSG00000121067.19	ENST00000347630.6	2965	11	3	-46	3	44	multi-exon	FALSE	canonical	3	23	junction_10	69.8730277002507	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGCTCACAAGAATGTTC	9492	False	NA	NA	False	NA	NA	NA	49678160	49598839	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_49600523_49601864_49602008_49607249_49607373_49607873_49607930_49611279_49611458_49618980_49619109_49619233_49619386_49621945_49622068_49622732_49622877_49636758_49636810_49677932
H1_mix_00037845	chr17	-	1624	9	FSM	ENSG00000121073.15	ENST00000240333.12	1615	9	0	-9	0	0	multi-exon	FALSE	canonical	3	268	junction_7	65.3604190240546	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTAGGCCTGGTGCA	7174	False	49707987	-8	True	ATTAAA	-22	NA	49707964	49700933	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_49701511_49702857_49703012_49703187_49703295_49704099_49704227_49705123_49705282_49705865_49705897_49706203_49706335_49706964_49707069_49707729
H1_mix_00037846	chr17	-	1338	9	FSM	ENSG00000121073.15	ENST00000507773.6	1320	9	0	-18	0	0	multi-exon	FALSE	canonical	3	172	junction_7	94.1540459831653	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATATTCTAAAAAATGCACT	7048	False	NA	-15	True	AATAAA	-20	NA	49708090	49701320	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_49701511_49702857_49703012_49703187_49703295_49704099_49704227_49705123_49705282_49705865_49705897_49706203_49706310_49706964_49707069_49707729
H1_mix_00037847	chr17	-	631	2	FSM	ENSG00000121073.15	ENST00000513508.1	631	2	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAACTTTCCCTTTCATG	9773	False	NA	NA	False	AGTAAA	-16	NA	49705365	49703837	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_49704227_49705123
H1_mix_00037848	chr17	-	910	6	FSM	ENSG00000121073.15	ENST00000435059.6	910	6	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_4	70.8480063233963	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTGTTTGCTACTTGTT	16	True	NA	NA	False	NA	NA	NA	49707920	49703931	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_49704227_49705123_49705282_49705865_49705897_49706203_49706335_49706964_49707069_49707729
H1_mix_00037853	chr17	-	2336	8	FSM	ENSG00000121104.8	ENST00000240364.7	2329	8	0	-7	0	7	multi-exon	FALSE	canonical	3	178	junction_6	9.79379228628721	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGTTAAATATTTGGGG	1	True	NA	1	True	AATAAA	-27	NA	49764131	49710324	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_49711556_49716164_49716316_49717512_49717715_49719759_49719895_49720325_49720437_49722498_49722595_49732550_49732721_49763891
H1_mix_00037854	chr17	-	550	3	FSM	ENSG00000176358.16	ENST00000352793.6	564	3	5	9	5	-9	multi-exon	FALSE	canonical	2	4	junction_1	1.5	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAGTGACCAGTGAATG	2321	False	NA	-16	True	NA	NA	NA	49848012	49838317	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_49838674_49844063_49844158_49847912
H1_mix_00037857	chr17	-	4718	10	FSM	ENSG00000167100.15	ENST00000330175.9	4763	10	45	0	45	0	multi-exon	FALSE	canonical	3	21	junction_6	6.92820323027551	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGCCTCCTGGATGGTCTG	4183	False	NA	NA	False	NA	NA	NA	50130115	50110039	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_50113049_50113923_50114080_50114186_50114307_50115563_50115724_50115829_50115905_50116002_50116091_50117406_50117696_50118160_50118328_50124916_50124972_50129516
H1_mix_00037858	chr17	-	4547	10	FSM	ENSG00000108819.11	ENST00000612501.2	4212	10	-330	-5	-330	5	multi-exon	FALSE	canonical	3	10	junction_5	3.77123616632825	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGGTTTCTTGATTC	770	False	NA	-2	True	CATAAA	-19	NA	50151007	50133731	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_50135385_50135552_50135650_50135967_50136198_50139262_50139317_50139428_50139582_50140092_50140229_50141268_50141374_50143597_50143719_50145112_50145246_50149142
H1_mix_00037859	chr17	-	5922	51	FSM	ENSG00000108821.14	ENST00000225964.10	5914	51	0	-8	0	8	multi-exon	FALSE	canonical	3	356	junction_44	61.4258089079826	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGGCCTCCTAATTTCC	-1	True	NA	-2	True	AATAAA	-29	NA	50201631	50184092	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_50185649_50185777_50186021_50186316_50186508_50186639_50186923_50187014_50187123_50187483_50187538_50187875_50187984_50188095_50188150_50188529_50188638_50188741_50188796_50188902_50189011_50189167_50189276_50189376_50189539_50189678_50189733_50189858_50189913_50190000_50190109_50190326_50190381_50190542_50190597_50190816_50190925_50191382_50191491_50191787_50191887_50191979_50192025_50192474_50192529_50192639_50192694_50192796_50192851_50192993_50193048_50193942_50194042_50194129_50194184_50194348_50194448_50194572_50194627_50194720_50194829_50195046_50195101_50195231_50195331_50195433_50195479_50195566_50195666_50195922_50195977_50196154_50196200_50196313_50196368_50196483_50196529_50196616_50196671_50197009_50197064_50197179_50197234_50197731_50197786_50197948_50198003_50198160_50198206_50198432_50198505_50199225_50199328_50199417_50199454_50199555_50199591_50199752_50199948_50201410
H1_mix_00037860	chr17	-	4764	51	NNC	ENSG00000108821.14	novel	5914	51	NA	NA	16	612	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	83.4571243214143	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGCTTGGTCCACTTGCT	61	False	NA	NA	False	AATAAA	-20	NA	50201615	50185231	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_50185649_50185777_50186021_50186316_50186508_50186642_50186923_50187014_50187123_50187483_50187538_50187875_50187984_50188095_50188150_50188529_50188638_50188741_50188796_50188902_50189011_50189167_50189276_50189376_50189539_50189678_50189733_50189858_50189913_50190000_50190109_50190326_50190381_50190542_50190597_50190816_50190925_50191382_50191491_50191787_50191887_50191979_50192025_50192474_50192529_50192639_50192694_50192796_50192851_50192993_50193048_50193942_50194042_50194129_50194184_50194348_50194448_50194572_50194627_50194720_50194829_50195046_50195101_50195231_50195331_50195433_50195479_50195566_50195666_50195922_50195977_50196154_50196200_50196313_50196368_50196483_50196529_50196616_50196671_50197009_50197064_50197179_50197234_50197731_50197786_50197948_50198003_50198160_50198206_50198432_50198505_50199225_50199328_50199417_50199454_50199555_50199591_50199752_50199948_50201410
H1_mix_00037861	chr17	-	760	4	FSM	ENSG00000108826.16	ENST00000225969.9	686	4	-14	-60	-2	50	multi-exon	FALSE	canonical	3	1349	junction_3	124.115537571517	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGGGGAGCCTCAAAGCAG	-11	True	NA	46	True	NA	NA	NA	50373198	50367806	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_50368299_50370031_50370100_50370454_50370587_50373130
H1_mix_00037862	chr17	-	2441	3	FSM	ENSG00000108826.16	ENST00000442592.3	2441	3	1	-1	1	0	multi-exon	FALSE	canonical	3	1349	junction_2	20	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGGATGGAACTGCCTG	9833	False	NA	-14	True	AATAAA	-38	NA	50373206	50367866	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_50370100_50370454_50370587_50373130
H1_mix_00037865	chr17	-	2880	7	FSM	ENSG00000108829.10	ENST00000225972.8	2880	7	0	0	0	0	multi-exon	FALSE	canonical	3	937	junction_1	36.9082947617771	194	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTTTGTTCCTTTGTGT	-13	True	NA	-6	True	ATTAAA	-17	NA	50397523	50381237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_50383236_50385117_50385292_50388059_50388133_50392397_50392503_50392738_50392898_50394928_50394989_50397212
H1_mix_00037866	chr17	-	2993	6	NNC	ENSG00000154945.7	novel	4166	5	NA	NA	0	30563	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	123.384601956646	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGGTCTCTCTCTGTCAC	-6	True	NA	NA	False	NA	NA	NA	50707655	50662634	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_50662660_50694136_50696144_50696939_50697122_50699398_50699894_50700567_50700717_50707520
H1_mix_00037867	chr17	-	4160	5	FSM	ENSG00000154945.7	ENST00000285243.7	4166	5	5	1	5	-1	multi-exon	FALSE	canonical	3	246	junction_2	43.4647845962683	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGATCCTATATGCCTTCAT	-17	True	NA	-18	True	ATTAAA	-17	NA	50707909	50693198	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_50696144_50696939_50697122_50699398_50699894_50700567_50700717_50707520
H1_mix_00037868	chr17	-	2238	2	FSM	ENSG00000141232.5	ENST00000499247.3	2238	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTATTGTCTTTGTTTTT	0	True	NA	-16	True	ATTAAA	-19	NA	50866354	50862222	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_50864164_50866057
H1_mix_00037870	chr17	-	8279	30	FSM	ENSG00000008294.22	ENST00000262013.12	8276	30	0	-3	0	3	multi-exon	FALSE	canonical	3	43	junction_24	38.8344454038118	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTAGTGTGTTTTGTTTT	-3	True	NA	-5	True	TATAAA	-22	NA	51120868	50962170	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_50966388_50970706_50970857_50974770_50974948_50977107_50977222_50979745_50979918_50982523_50982673_50984922_50984991_50985697_50985779_50987111_50987238_50989676_50989873_50990449_50990669_50993763_50993936_50995056_50995225_50995443_50995534_50996564_50996695_50998443_50998618_50999660_50999718_51001714_51001846_51005211_51005264_51006084_51006238_51007268_51007327_51014231_51014354_51020158_51020259_51021157_51021366_51031680_51031723_51041500_51041652_51047374_51047470_51056411_51056483_51079583_51079705_51120353
H1_mix_00037871	chr17	-	7873	27	NIC	ENSG00000008294.22	novel	8276	30	NA	NA	-17	3	intron_retention	FALSE	canonical	3	29	junction_26	46.0644807908712	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTAGTGTGTTTTGTTTT	2	True	NA	-5	True	TATAAA	-22	NA	51046895	50962170	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_50966388_50970706_50970857_50974770_50974948_50977107_50977222_50979745_50979918_50982523_50982673_50984922_50984991_50985697_50985779_50987111_50987238_50989676_50989873_50990449_50990669_50993763_50993936_50995056_50995225_50995443_50995534_50996564_50996695_50998443_50998618_50999660_50999718_51001714_51001846_51005211_51005264_51006084_51006238_51007268_51007327_51014231_51014354_51020158_51020259_51021157_51021366_51031680_51031723_51041500_51041652_51046499
H1_mix_00037872	chr17	-	4553	28	NIC	ENSG00000008294.22	novel	4949	27	NA	NA	27	182	combination_of_known_junctions	FALSE	canonical	1	2	junction_4	60.2398042759469	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTATTTCTTGTACCAG	10	True	NA	NA	False	TTTAAA	-10	NA	51046810	50965444	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_50966388_50970706_50970857_50974770_50974948_50975862_50975902_50977107_50977222_50979745_50979918_50982523_50982673_50984922_50984991_50985697_50985779_50987111_50987238_50989676_50989873_50990449_50990669_50993763_50993936_50995056_50995225_50995443_50995534_50996564_50996695_50998443_50998618_50999660_50999718_51001714_51001846_51005211_51005264_51006084_51006238_51007268_51007327_51014231_51014354_51020158_51020259_51021157_51021366_51031680_51031723_51041500_51041652_51046499
H1_mix_00037873	chr17	-	4761	29	FSM	ENSG00000008294.22	ENST00000357122.8	4761	29	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_24	28.1858808191446	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTTTCCTGTTTCTGACTT	0	True	NA	-38	True	ATTAAA	-28	NA	51120865	50965643	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_50966388_50970706_50970857_50974770_50974948_50977107_50977222_50979745_50979918_50982523_50982673_50984922_50984991_50985697_50985779_50987111_50987238_50989676_50989873_50990449_50990669_50993763_50993936_50995056_50995225_50995443_50995534_50996564_50996695_50998443_50998618_50999660_50999718_51001714_51001846_51005211_51005264_51006084_51006238_51007268_51007327_51014231_51014354_51020158_51020259_51021157_51021366_51041500_51041652_51047374_51047470_51056411_51056483_51079583_51079705_51120353
H1_mix_00037877	chr17	-	784	3	FSM	ENSG00000008294.22	ENST00000511987.5	1298	3	0	514	0	15	multi-exon	FALSE	canonical	3	29	junction_2	7.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCCTGTTTGCATTTAT	864	False	NA	-3	True	AATAAA	-31	NA	51046837	51031427	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_51031723_51041500_51041652_51046499
H1_mix_00037882	chr17	-	386	1	FSM	ENSG00000233380.1	ENST00000441047.1	882	1	333	163	333	-163	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGACGCCATCTCTAAGA	359	False	NA	NA	False	GGGGCT	-35	NA	53757537	53757151	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_53757200_53757500
H1_mix_00037884	chr17	-	3248	1	FSM	ENSG00000166260.13	ENST00000572088.1	3244	1	0	-4	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTCCTTGTGGAGAGT	3579	False	NA	-4	True	AATAAA	-18	NA	54955149	54951901	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_54951900_54955100
H1_mix_00037885	chr17	-	1061	5	FSM	ENSG00000166260.13	ENST00000572558.5	1054	5	0	-7	0	0	multi-exon	FALSE	canonical	3	8	junction_1	220.06930726478	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTCCTTGTGGAGAGT	-2	True	NA	-4	True	AATAAA	-18	NA	54968654	54951901	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_54952113_54961118_54961313_54963305_54963432_54964696_54964853_54968280
H1_mix_00037886	chr17	-	5423	5	Fusion	ENSG00000279059.1_ENSG00000166260.13	novel	3150	4	NA	NA	0	264	multi-exon	FALSE	canonical	3	13	junction_1	186.045693312154	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTCTACTAAATATACAAAA	-1	True	NA	NA	False	NA	NA	NA	54968653	54956495	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr17_-_54959467_54961118_54962916_54963305_54963432_54964696_54964853_54968280
H1_mix_00037890	chr17	-	2620	7	FSM	ENSG00000108960.9	ENST00000262065.8	2569	7	0	-51	0	51	multi-exon	FALSE	canonical	3	308	junction_6	24.0346971411471	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCACTTAGAACTTTCTA	-3	True	NA	31	True	AATACA	-3	NA	55421835	55392570	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_55394535_55401468_55401539_55403766_55403869_55407745_55407821_55411256_55411418_55414150_55414233_55421669
H1_mix_00037891	chr17	-	2641	8	FSM	ENSG00000108960.9	ENST00000649377.1	2641	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	155.124571403312	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATAAAGTTGTTACTTGG	-3	True	NA	-41	True	NA	NA	NA	55421835	55392642	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_55394535_55401468_55401539_55403766_55403869_55404454_55404548_55407745_55407821_55411256_55411418_55414150_55414233_55421669
H1_mix_00037892	chr17	-	850	3	NNC	ENSG00000214226.9	novel	2037	8	NA	NA	0	-2537	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	4.5	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAGAAATTTGTAAATAAAA	-12	True	NA	NA	False	NA	NA	NA	56833920	56827283	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_56827458_56832897_56833343_56833689
H1_mix_00037893	chr17	-	5746	9	FSM	ENSG00000121060.19	ENST00000316881.9	5745	9	0	-1	0	1	multi-exon	TRUE	canonical	0	0	junction_5	8.61684396980704	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGAGTTCTGTGATTTTT	14	True	NA	-5	True	AATAAA	-18	NA	56914049	56887907	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_56892230_56895342_56895442_56895520_56895605_56895925_56895953_56899114_56899181_56901418_56901579_56904254_56904489_56908467_56908564_56913391
H1_mix_00037901	chr17	-	707	2	FSM	ENSG00000180891.13	ENST00000577497.5	707	2	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCAGAAAGCAGATAAAAGT	9886	False	NA	-115	True	TTTAAA	-11	NA	57866857	57862962	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_57863286_57866473
H1_mix_00037902	chr17	-	4630	6	FSM	ENSG00000136451.9	ENST00000581208.2	4630	6	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_3	18.2756668824971	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATGATGGATTGTTTAA	-32	True	NA	-6	True	ATTAAA	-17	NA	57988254	57971551	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_57974901_57979151_57979314_57980602_57980787_57981872_57981937_57982698_57983394_57988078
H1_mix_00037903	chr17	-	3346	4	NNC	ENSG00000266086.3	novel	711	3	NA	NA	8802	1	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_3	131.489754564968	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTTGTTTTTATTTTTG	9947	False	NA	-1	True	ACTAAA	-27	NA	57996451	57989036	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_57989270_57989648_57989797_57990881_57990946_57993550
H1_mix_00037905	chr17	-	6000	3	NIC	ENSG00000264112.1	novel	4722	2	NA	NA	-1653	2	combination_of_known_junctions	FALSE	canonical	3	214	junction_1	94	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTTGTTTTTATTTTTG	9895	False	NA	-1	True	ACTAAA	-27	NA	57996503	57989036	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_57989267_57989648_57989797_57990881
H1_mix_00037906	chr17	-	7467	1	FSM	ENSG00000264112.1	ENST00000582096.1	2483	1	-4982	-2	-1653	2	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTTGTTTTTATTTTTG	9895	False	NA	-1	True	ACTAAA	-27	NA	57996503	57989036	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_57989000_57996500
H1_mix_00037910	chr17	-	5343	4	FSM	ENSG00000136450.13	ENST00000258962.5	5343	4	0	0	0	0	multi-exon	FALSE	canonical	3	1661	junction_1	257.827246211274	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGCCTTCATTTTGCAC	4	True	NA	-17	True	ATTAAA	-19	NA	58007246	58000918	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_58005601_58005800_58005974_58006342_58006528_58006943
H1_mix_00037911	chr17	-	3117	3	FSM	ENSG00000136450.13	ENST00000582730.6	3117	3	0	0	0	0	multi-exon	FALSE	canonical	3	1909	junction_2	189.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAATGGTATTAGCCATCT	-11	True	NA	-35	True	ATTAAA	-17	NA	58007261	58003359	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_58005974_58006342_58006528_58006943
H1_mix_00037916	chr17	-	2027	15	FSM	ENSG00000011143.19	ENST00000678568.1	2023	15	0	-4	0	4	multi-exon	TRUE	canonical	1	4	junction_2	50.8477619759138	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTGTTGGCTGTTTGTC	-4	True	NA	-1	True	CATAAA	-20	NA	58219245	58205436	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_58206171_58206282_58206381_58207084_58207219_58207893_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58218619_58218730_58219150
H1_mix_00037924	chr17	-	1401	4	FSM	ENSG00000213246.7	ENST00000581166.5	1401	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	230.912681909562	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGCCATTTTTCAATAC	14	True	NA	-1	True	TATAAA	-24	NA	58352167	58345174	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_58346314_58347187_58347242_58351401_58351509_58352066
H1_mix_00037926	chr17	-	1643	5	FSM	ENSG00000213246.7	ENST00000577396.5	1643	5	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_4	186.571702034365	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTGATTGTAGAAACGAAG	655	False	NA	-73	True	AAAAAG	-37	NA	58352423	58345246	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_58346314_58347187_58347242_58347528_58347585_58351401_58351509_58352064
H1_mix_00037927	chr17	-	303	1	FSM	ENSG00000266648.1	ENST00000581726.1	813	1	115	395	115	-395	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCAAAGAATTTCATCTGA	NA	False	NA	NA	False	AATAAA	-6	NA	58476835	58476532	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_58476500_58476800
H1_mix_00037928	chr17	-	5993	18	FSM	ENSG00000108389.10	ENST00000682306.1	5987	18	0	-6	0	-2	multi-exon	FALSE	canonical	3	74	junction_17	15.2040333384857	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGGGTCGTTTTATTTT	18	True	NA	-1	True	AATAAA	-21	NA	58514638	58489530	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_58491841_58492510_58492600_58492841_58492953_58494931_58496331_58503743_58503899_58504049_58504221_58504302_58504489_58504778_58504975_58505471_58505584_58506742_58506872_58507122_58507320_58508160_58508275_58508467_58508565_58508680_58508842_58511428_58511512_58512389_58512507_58512851_58512942_58514362
H1_mix_00037931	chr17	-	1659	12	FSM	ENSG00000108387.16	ENST00000317256.10	1530	12	-28	-101	1	0	multi-exon	FALSE	canonical	3	22	junction_10	21.7540724789978	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTGGTGTCCCTGTGTG	-36	True	NA	-8	True	AATAAA	-21	NA	58532074	58520257	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_58520486_58520742_58520843_58520997_58521161_58521253_58521351_58521544_58521647_58521735_58521854_58521966_58522102_58525077_58525202_58525694_58525782_58526219_58526314_58526681_58526979_58531960
H1_mix_00037934	chr17	-	3622	25	FSM	ENSG00000108395.14	ENST00000393066.7	3622	25	13	-13	13	0	multi-exon	FALSE	canonical	3	59	junction_1	64.1995045844506	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGCTGTTTTTGTCTAT	-4	True	NA	-4	True	AATAAA	-33	NA	59106908	58982637	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_58982922_58999380_58999460_59001597_59001715_59012327_59012447_59015609_59015800_59017295_59017425_59028414_59028724_59031895_59032091_59041812_59041899_59047682_59047820_59049177_59049394_59051213_59051329_59056874_59057055_59061031_59061109_59062566_59062649_59064354_59064406_59070822_59070948_59075646_59075715_59079753_59079878_59081096_59081220_59084001_59084090_59088290_59088408_59091299_59091341_59104292_59104395_59106440
H1_mix_00037935	chr17	-	4505	24	FSM	ENSG00000108395.14	ENST00000262294.12	4489	24	0	-16	0	14	multi-exon	FALSE	canonical	3	269	junction_22	33.8930264224901	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAATTGGGACCAGAAAC	24	False	59106904	11	True	AATAAA	-32	NA	59106880	58998185	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_58999460_59001597_59001715_59012327_59012447_59015609_59015800_59017295_59017425_59028414_59028724_59031895_59032091_59041812_59041899_59047682_59047820_59049177_59049394_59051213_59051329_59056874_59057055_59061031_59061109_59062566_59062649_59064354_59064406_59070822_59070948_59075646_59075715_59079753_59079878_59081096_59081220_59084001_59084090_59088290_59088408_59091299_59091341_59104292_59104395_59106440
H1_mix_00037940	chr17	-	2932	4	FSM	ENSG00000182628.13	ENST00000330137.12	2809	4	-8	-115	0	115	multi-exon	FALSE	canonical	3	397	junction_2	73.769912566032	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGGGCAGATCACAAGGTC	-1	True	NA	NA	False	NA	NA	NA	59155194	59109741	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_59112346_59119318_59119496_59131280_59131368_59155130
H1_mix_00037941	chr17	-	608	3	FSM	ENSG00000182628.13	ENST00000581068.5	595	3	0	-13	0	0	multi-exon	FALSE	canonical	3	226	junction_1	174	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTTCTGGTCTATCATA	-4	True	NA	-60	True	NA	NA	NA	59155248	59111942	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_59112346_59131280_59131368_59155130
H1_mix_00037942	chr17	-	2897	2	FSM	ENSG00000182628.13	ENST00000583927.1	533	2	-163	-2201	-163	115	multi-exon	FALSE	canonical	3	105	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGGGCAGATCACAAGGTC	353	False	NA	NA	False	NA	NA	NA	59155423	59109741	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_59112346_59155130
H1_mix_00037943	chr17	-	625	3	FSM	ENSG00000182628.13	ENST00000437036.6	625	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	96.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTACACACGCATGCAC	-1	True	NA	-30	True	AATAAA	-42	NA	59155194	59112046	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_59112346_59131280_59131368_59154955
H1_mix_00037944	chr17	-	583	4	FSM	ENSG00000182628.13	ENST00000583380.5	583	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	221.64887146616	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTTCAGCCAAAAGGATC	19	True	NA	-74	True	AATATA	-6	NA	59155174	59112090	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_59112346_59119298_59119496_59131280_59131368_59155130
H1_mix_00037946	chr17	-	4118	1	FSM	ENSG00000141378.15	ENST00000470557.2	4114	1	0	-4	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTGGCAGTTGTCATC	6008	False	NA	-17	True	AATAAA	-17	NA	59701425	59697307	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_59697300_59701400
H1_mix_00037949	chr17	-	2532	9	FSM	ENSG00000108423.15	ENST00000325752.8	2491	9	44	-85	0	85	multi-exon	FALSE	canonical	3	62	junction_3	16.684105459988	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAGCAGATATTGATTTT	14	True	NA	72	True	NA	NA	NA	59892899	59859393	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_59860425_59863663_59863848_59866608_59866750_59874538_59874704_59878102_59878335_59880893_59881111_59886082_59886231_59890830_59891042_59892696
H1_mix_00037950	chr17	-	2184	7	FSM	ENSG00000108423.15	ENST00000613721.4	2184	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	34.1158158174312	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGGTAAATGTGTACTT	-32	True	NA	-16	True	AATAAA	-45	NA	59892945	59859481	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_59860425_59863663_59863848_59878102_59878335_59880893_59881111_59886082_59886231_59890830_59891042_59892696
H1_mix_00037952	chr17	-	2122	9	FSM	ENSG00000189050.16	ENST00000305783.13	2122	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	16.431676725155	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGGCTTACTTGATGAT	4	True	NA	NA	False	ATTAAA	-22	NA	59964740	59952239	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_59953112_59954044_59954147_59956487_59956554_59957223_59957383_59958290_59958445_59960067_59960169_59962539_59962617_59962826_59963285_59964607
H1_mix_00037953	chr17	-	2015	8	FSM	ENSG00000189050.16	ENST00000482446.5	1893	8	0	-122	0	0	multi-exon	TRUE	canonical	3	9	junction_5	20.2121402193063	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGGCTTACTTGATGAT	10	True	NA	NA	False	ATTAAA	-22	NA	59964734	59952239	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_59953112_59954044_59954147_59956487_59956554_59957223_59957383_59958290_59958445_59962539_59962617_59962826_59963285_59964607
H1_mix_00037954	chr17	-	1809	7	FSM	ENSG00000189050.16	ENST00000466544.5	1809	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	21.7389818835504	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAGTAATAAGTGAAAATAA	-17	True	NA	-33	True	NA	NA	NA	59964761	59952395	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_59953112_59954044_59954147_59956487_59956554_59957223_59957383_59958290_59958445_59962826_59963285_59964607
H1_mix_00037957	chr17	-	334	3	ISM	ENSG00000266992.1	ENST00000588725.1	1412	11	681	24074	681	-24074	internal_fragment	FALSE	canonical	3	55	junction_1	3	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATCCTCGATGGCTTGTT	NA	False	NA	NA	False	NA	NA	NA	60001703	60000082	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_60000163_60001229_60001297_60001516
H1_mix_00037958	chr17	-	6095	20	FSM	ENSG00000068097.16	ENST00000184956.11	6108	20	0	13	0	-13	multi-exon	FALSE	canonical	3	83	junction_12	13.6200927018782	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGCACACAGCTCCACTG	8	True	NA	NA	False	AATAAA	-21	NA	60078921	60041020	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_60044135_60046024_60046230_60047308_60047406_60048263_60048389_60049579_60049703_60050842_60050978_60055514_60055602_60056114_60056238_60057047_60057404_60059421_60059522_60059889_60060097_60066208_60066387_60067433_60067733_60069710_60069849_60070705_60070808_60072214_60072330_60073163_60073280_60073745_60073887_60076129_60076238_60078695
H1_mix_00037960	chr17	-	1111	1	FSM	ENSG00000280852.2	ENST00000634326.1	1161	1	210	-160	-47	160	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATTTCAAAGTTTCAAAT	NA	False	NA	NA	False	NA	NA	NA	60102709	60101598	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_60101600_60102700
H1_mix_00037961	chr17	-	798	1	FSM	ENSG00000267248.4	ENST00000586143.1	1023	1	91	134	-28	-134	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGGGTAACTTAATTAAAAA	107	False	NA	NA	False	NA	NA	NA	60135553	60134755	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_60134800_60135600
H1_mix_00037962	chr17	-	7375	34	FSM	ENSG00000170832.13	ENST00000300896.9	6937	34	0	-438	0	438	multi-exon	FALSE	canonical	3	164	junction_27	31.3445557535957	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCTGCTAGCAATCTAG	-2	True	NA	NA	False	NA	NA	NA	60392133	60176888	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_60179429_60180544_60180638_60181323_60181749_60183164_60183454_60185459_60185652_60190562_60190684_60192843_60192931_60198259_60198445_60205446_60205659_60207020_60207133_60208058_60208211_60208653_60208829_60209369_60209544_60211012_60211119_60211375_60211515_60212023_60212099_60213580_60213663_60214619_60214775_60219669_60219788_60222408_60222550_60223410_60223587_60226038_60226232_60236137_60236241_60252380_60252443_60255174_60255259_60265411_60265475_60265975_60266092_60269449_60269558_60271349_60271482_60288522_60288683_60294682_60294802_60301598_60301705_60345480_60345609_60391881
H1_mix_00037963	chr17	-	739	6	FSM	ENSG00000170832.13	ENST00000591768.1	739	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	87.7300404650539	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACAAGATGGAAGCATGCA	NA	False	NA	NA	False	NA	NA	NA	60226063	60213580	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_60213663_60214619_60214775_60219627_60219788_60222408_60222550_60223410_60223587_60226038
H1_mix_00037966	chr17	-	1858	1	FSM	ENSG00000213228.5	ENST00000588627.1	2319	1	469	-8	469	8	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAGAAAAAGAAAAAC	10	False	NA	NA	False	AATAAA	-29	NA	60435527	60433669	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_60433700_60435500
H1_mix_00037967	chr17	-	6490	13	FSM	ENSG00000062725.10	ENST00000083182.8	6492	13	0	2	0	-2	multi-exon	TRUE	canonical	3	69	junction_1	9.9173669220548	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCATAGTGTATCTGTTT	-14	True	NA	-12	True	AATAAA	-14	NA	60526242	60443159	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_60447835_60451879_60452046_60454301_60454493_60456295_60456382_60460662_60460788_60461809_60461916_60461993_60462062_60464020_60464111_60466290_60466460_60479147_60479272_60494465_60494618_60500398_60500488_60525793
H1_mix_00037971	chr17	-	6123	25	FSM	ENSG00000108506.13	ENST00000251334.7	6128	25	5	0	0	0	multi-exon	TRUE	canonical	3	56	junction_24	19.630926210673	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTAGTTTTTGTGTTTCA	5	True	NA	-1	True	TATAAA	-25	NA	61927977	61865366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_61867727_61867832_61868010_61869033_61869140_61869272_61869381_61869736_61869989_61872264_61872461_61874912_61875039_61877886_61878089_61881006_61881172_61884900_61885006_61889785_61889895_61891512_61891690_61893764_61893900_61895314_61895384_61897468_61897584_61897667_61897740_61904459_61904586_61907407_61907635_61911519_61911694_61911939_61912071_61919399_61919514_61921724_61921828_61924960_61925100_61926351_61926663_61927653
H1_mix_00037972	chr17	-	5860	25	FSM	ENSG00000108506.13	ENST00000647009.1	5837	25	0	-23	0	0	multi-exon	FALSE	canonical	3	20	junction_24	23.2217196583046	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTAGTTTTTGTGTTTCA	0	True	NA	-1	True	TATAAA	-25	NA	61927982	61865366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_61867727_61867832_61868010_61869033_61869140_61869272_61869381_61869736_61869989_61872264_61872461_61874912_61875039_61877886_61878089_61881006_61881172_61884900_61885006_61889785_61889895_61891512_61891690_61893764_61893900_61895314_61895384_61897468_61897584_61897667_61897740_61904459_61904586_61907407_61907635_61911519_61911694_61911939_61912071_61919399_61919514_61921724_61921828_61924960_61925100_61926351_61926663_61927921
H1_mix_00037973	chr17	-	5852	25	FSM	ENSG00000108506.13	ENST00000444766.7	5878	25	29	-3	-5	0	multi-exon	FALSE	canonical	3	27	junction_24	22.3879928136093	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTAGTTTTTGTGTTTCA	-5	True	NA	-1	True	TATAAA	-25	NA	61927987	61865366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_61867727_61867832_61868010_61869033_61869140_61869272_61869381_61869736_61869989_61872264_61872461_61874912_61875039_61877886_61878089_61881006_61881172_61884900_61885006_61889785_61889895_61891512_61891690_61893764_61893900_61895314_61895384_61897468_61897584_61897667_61897740_61904459_61904586_61907407_61907635_61911519_61911694_61911939_61912071_61919399_61919514_61921724_61921828_61924960_61925100_61926351_61926663_61927934
H1_mix_00037974	chr17	-	10513	30	FSM	ENSG00000108510.10	ENST00000397786.7	10461	30	0	-52	0	52	multi-exon	TRUE	canonical	1	3	junction_27	13.6121754270694	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTAGCAATATTTTTGTGT	-6	True	NA	52	True	ATTAAA	-13	NA	62065278	61942552	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_61946601_61946916_61947018_61950824_61950999_61952964_61953114_61955381_61955568_61955679_61955839_61956338_61956482_61960866_61961091_61961587_61961780_61962751_61962972_61965005_61965469_61966461_61966652_61968034_61968259_61972726_61972889_61982197_61983115_61984170_61984368_61984650_61984866_61984999_61985091_61987006_61987129_61992539_61992622_61995151_61995366_62010549_62011234_62029540_62029652_62029850_62030014_62031443_62031639_62033786_62033985_62035462_62035609_62052536_62052706_62063066_62063302_62065139
H1_mix_00037976	chr17	-	2821	9	ISM	ENSG00000289293.1_ENSG00000108510.10	ENST00000397786.7	10461	30	-658	67822	19	0	5prime_fragment	FALSE	canonical	1	3	junction_6	3.75624480032918	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCATTATTCCTTTACT	52	False	NA	-6	True	AATAAA	-16	NA	62065936	62010426	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_62011234_62029540_62029652_62029850_62030014_62031443_62031639_62033786_62033985_62035462_62035609_62052536_62052706_62063066_62063302_62065139
H1_mix_00037977	chr17	-	4423	1	FSM	ENSG00000266066.1	ENST00000578759.1	3668	1	-698	-57	-698	57	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAGAAAGTTGTTGG	NA	False	NA	NA	False	AATAAA	-21	NA	62141337	62136914	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_62136900_62141300
H1_mix_00037982	chr17	-	3164	6	FSM	ENSG00000008283.16	ENST00000392976.5	3151	6	-13	0	-13	0	multi-exon	FALSE	canonical	3	39	junction_5	37.075059001976	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTCTCGCCTGTTATCT	-11	True	NA	-10	True	AATAAA	-11	NA	63446197	63432306	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_63434595_63435085_63435244_63435687_63435792_63436053_63436153_63437345_63437561_63445897
H1_mix_00037983	chr17	-	3144	6	FSM	ENSG00000008283.16	ENST00000584031.5	3200	6	61	-5	61	4	multi-exon	FALSE	canonical	1	1	junction_3	51.5961238854238	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCCTGTTATCTTCCTTTA	517	False	NA	-3	True	AATAAA	-18	NA	63446123	63432299	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_63434595_63435085_63435244_63435687_63435792_63436006_63436153_63437345_63437561_63445897
H1_mix_00037985	chr17	-	753	4	FSM	ENSG00000008283.16	ENST00000577368.5	753	4	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_3	22.0050499254653	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCTAAGCGCTTAGTGC	11	True	NA	NA	False	NA	NA	NA	63446306	63435414	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_63435792_63436053_63436153_63437345_63437561_63446244
H1_mix_00037988	chr17	-	2019	3	FSM	ENSG00000136490.9	ENST00000578067.5	2019	3	0	0	0	0	multi-exon	FALSE	canonical	3	1182	junction_2	8	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTCTATTGTGTGGCCT	12	True	NA	-19	True	AATAGA	-5	NA	63700108	63697815	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_63698712_63698798_63699070_63699256
H1_mix_00037989	chr17	-	1898	4	ISM	ENSG00000136490.9	ENST00000578402.5	1534	5	592	17	9	0	3prime_fragment	FALSE	canonical	3	1168	junction_2	12.2565175405668	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTTCAATAGATCCAGAT	4306	False	NA	-36	True	TTTAAA	-2	NA	63700093	63697832	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_63698712_63698798_63698939_63699027_63699070_63699256
H1_mix_00037990	chr17	-	1298	5	FSM	ENSG00000136490.9	ENST00000583211.5	1298	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	486.798918959358	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTTCAATAGATCCAGAT	-12	True	NA	-36	True	TTTAAA	-2	NA	63700132	63697832	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_63698712_63698798_63698939_63699027_63699114_63699256_63699349_63700031
H1_mix_00037996	chr17	-	2212	12	FSM	ENSG00000266173.7	ENST00000375840.9	2209	12	0	-3	0	0	multi-exon	FALSE	canonical	3	56	junction_10	39.1065507818011	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATTGTGTCTGCGTCAG	2	True	NA	-18	True	ATTAAA	-25	NA	63741874	63702831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_63703752_63704004_63704048_63704340_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63726637_63726696_63728333_63728414_63741740
H1_mix_00038001	chr17	-	1307	7	FSM	ENSG00000266173.7	ENST00000579318.2	1307	7	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	22.0938654130256	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGCACCCCCCGGCCCTC	NA	False	NA	NA	False	NA	NA	NA	63714554	63704456	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005
H1_mix_00038003	chr17	-	3283	13	FSM	ENSG00000108588.15	ENST00000225726.10	3283	13	0	0	0	0	multi-exon	FALSE	canonical	3	644	junction_3	54.8723265610473	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGAGTGCCGCCTTGAC	-17	True	NA	-6	True	ATTAAA	-14	NA	63773597	63745254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_63746962_63751939_63752108_63752319_63752430_63752740_63752800_63754432_63754519_63756239_63756351_63756468_63756571_63760913_63760980_63761229_63761352_63764015_63764191_63764739_63764848_63765911_63766195_63773411
H1_mix_00038004	chr17	-	3131	13	NIC	ENSG00000108588.15	novel	3283	13	NA	NA	-1048	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	210.884051870532	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGAGTGCCGCCTTGAC	NA	False	NA	-6	True	ATTAAA	-14	NA	63774645	63745254	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_63746962_63751939_63752108_63752319_63752430_63752740_63752800_63754432_63754519_63756239_63756351_63756468_63756571_63760913_63760980_63761229_63761352_63764015_63764191_63764739_63764848_63765911_63766195_63774611
H1_mix_00038005	chr17	-	2304	14	FSM	ENSG00000108588.15	ENST00000403162.7	2195	14	-109	0	-82	0	multi-exon	FALSE	canonical	3	12	junction_13	265.004454579061	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTATGTCTACATTAAAC	541	False	NA	-6	True	AATAAA	-17	NA	63773679	63746402	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_63746962_63751939_63752108_63752319_63752430_63752740_63752800_63754432_63754519_63756239_63756351_63756468_63756571_63760913_63760980_63761229_63761352_63764015_63764191_63764739_63764848_63765911_63766195_63772776_63772864_63773411
H1_mix_00038007	chr17	-	3551	21	FSM	ENSG00000108592.17	ENST00000427159.7	3551	21	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_20	80.1137316569388	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGTCTTTTCTGACAGT	0	True	NA	-8	True	AATAAA	-16	NA	63827663	63819432	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_63819995_63820078_63820174_63820254_63820439_63820838_63820939_63821029_63821116_63821353_63821644_63821722_63821844_63821983_63822169_63823816_63823953_63824083_63824240_63824330_63824412_63824636_63824738_63824824_63824930_63825047_63825164_63825241_63825437_63825535_63825636_63826055_63826136_63826257_63826305_63826566_63826673_63826835_63826929_63827051
H1_mix_00038011	chr17	-	2468	13	FSM	ENSG00000108604.17	ENST00000448276.7	2464	13	0	-4	0	4	multi-exon	TRUE	canonical	3	839	junction_2	38.5518229861515	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGACCTGGTCCTTGA	21	True	NA	-8	True	AATAAA	-20	NA	63842685	63832076	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_63832992_63833068_63833171_63833297_63833421_63833586_63833723_63833908_63834007_63834166_63834329_63834473_63834576_63834704_63834801_63835411_63835568_63836921_63837045_63837194_63837238_63837440_63837626_63842458
H1_mix_00038012	chr17	-	1800	13	FSM	ENSG00000108604.17	ENST00000225742.13	1800	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_12	242.949740458575	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCGAGGGTCAGAGCTGGC	-4	True	NA	NA	False	NA	NA	NA	63842466	63832603	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_63832992_63833068_63833171_63833297_63833421_63833586_63833723_63833908_63834007_63834166_63834329_63834473_63834576_63834704_63834801_63835411_63835568_63836921_63837045_63837194_63837238_63837440_63837626_63842380
H1_mix_00038014	chr17	-	889	5	FSM	ENSG00000136487.18	ENST00000423893.7	903	5	14	0	5	0	multi-exon	FALSE	canonical	1	1	junction_1	3.74165738677394	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTGACTAGGTGTCC	13	True	NA	-9	True	AATAAA	-15	NA	63881930	63880214	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_63880519_63880771_63880937_63881028_63881149_63881358_63881520_63881791
H1_mix_00038016	chr17	-	1221	6	FSM	ENSG00000007312.13	ENST00000392795.7	1254	6	28	5	15	-5	multi-exon	TRUE	canonical	1	2	junction_5	2.99332590941915	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCACACACAGGCTCGTGG	16	True	NA	-8	True	AATAAA	-16	NA	63932308	63928744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_63929325_63929433_63929476_63929769_63929889_63930073_63930386_63931334_63931389_63932194
H1_mix_00038019	chr17	-	401	3	FSM	ENSG00000007314.12	ENST00000584310.1	577	3	176	0	176	0	multi-exon	FALSE	canonical	3	14	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTACGGCTTTAAGGTGT	NA	False	NA	NA	False	NA	NA	NA	63949528	63947953	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_63948064_63948610_63948766_63949392
H1_mix_00038020	chr17	-	7893	22	FSM	ENSG00000178607.17	ENST00000433197.4	7895	22	0	2	0	-2	multi-exon	FALSE	canonical	1	1	junction_6	4.63839834738511	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCAGTCTCATTTTCTTA	-5	True	NA	-1	True	AATAAA	-18	NA	64130144	64039143	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64044201_64044859_64044928_64045358_64045483_64047857_64047986_64049054_64049203_64052779_64052980_64053271_64053372_64054249_64054440_64054737_64054829_64055674_64055949_64057801_64057994_64060468_64060588_64063985_64064152_64065208_64065288_64066670_64066933_64068189_64068292_64071980_64072104_64075174_64075248_64079661_64079735_64080774_64080809_64098120_64098242_64129975
H1_mix_00038022	chr17	-	1966	11	FSM	ENSG00000136478.9	ENST00000583501.1	1966	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	26.1503346058898	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCCACAGCTACTGTTT	1070	False	NA	NA	False	NA	NA	NA	64212719	64148882	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64149092_64150840_64150962_64152944_64153155_64154841_64154962_64160800_64160934_64171099_64171200_64177324_64177472_64188167_64188416_64193558_64193890_64194894_64195096_64212573
H1_mix_00038025	chr17	-	1601	9	FSM	ENSG00000256525.8	ENST00000585104.2	1601	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	62.6333577257359	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATATATCATCAGCTAAG	9974	False	NA	-73	True	ATTAAA	-15	NA	64496939	64477851	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64477989_64480288_64480390_64481245_64481447_64482918_64483000_64485727_64485869_64490795_64490970_64492666_64492773_64492894_64493022_64496406
H1_mix_00038027	chr17	-	472	4	FSM	ENSG00000256525.8	ENST00000577506.5	472	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	70.3151635297979	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAATTGTATTTTCATT	9970	False	NA	NA	False	NA	NA	NA	64490969	64480288	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64480390_64482918_64482975_64485727_64485869_64490795
H1_mix_00038029	chr17	-	4003	14	FSM	ENSG00000108654.16	ENST00000678814.1	3998	14	0	-5	0	0	multi-exon	FALSE	canonical	3	76	junction_2	1449.02803579527	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTCTTTTTATTTATTT	392	False	NA	-3	True	AATAAA	-18	NA	64506521	64498253	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64500327_64500548_64500774_64501056_64501144_64502009_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075
H1_mix_00038030	chr17	-	3831	14	FSM	ENSG00000108654.16	ENST00000450599.7	3826	14	0	-5	0	1	multi-exon	FALSE	canonical	3	52	junction_13	1083.60991037819	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTTTTTATTTATTTG	227	False	NA	-2	True	AATAAA	-19	NA	64506686	64498252	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64500327_64500548_64500774_64502009_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075_64506263_64506513
H1_mix_00038031	chr17	-	3873	14	FSM	ENSG00000108654.16	ENST00000577922.6	3868	14	0	-5	0	1	multi-exon	FALSE	canonical	3	116	junction_13	1067.03991374025	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTTTTTATTTATTTG	182	False	NA	-2	True	AATAAA	-19	NA	64506731	64498252	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64500327_64500548_64500774_64502009_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075_64506260_64506513
H1_mix_00038033	chr17	-	5538	14	FSM	ENSG00000108654.16	ENST00000678890.1	5535	14	0	-3	0	0	multi-exon	FALSE	canonical	1	1	junction_13	1463.73988053541	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTCTTTTTATTTATTT	NA	False	NA	-3	True	AATAAA	-18	NA	64507562	64498253	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64500327_64500548_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075_64506263_64506754_64507315_64507477
H1_mix_00038035	chr17	-	5782	7	FSM	ENSG00000108654.16	ENST00000579461.2	5782	7	0	0	0	0	multi-exon	FALSE	canonical	3	3649	junction_4	291.185173996815	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACTAATAAATGTGATTT	607	False	NA	-32	True	NA	NA	NA	64506306	64498282	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64502550_64502925_64503099_64503187_64503349_64503429_64504117_64504221_64504319_64504676_64504843_64506075
H1_mix_00038036	chr17	-	3558	12	FSM	ENSG00000108654.16	ENST00000581230.5	3558	12	0	0	0	0	multi-exon	FALSE	canonical	3	3649	junction_9	220.01945819284	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAAATTGTACTTTATTT	-2	True	NA	-7	True	AATAAA	-23	NA	64506289	64499615	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64500327_64500548_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075
H1_mix_00038037	chr17	-	5340	3	FSM	ENSG00000108654.16	ENST00000582326.2	5340	3	0	0	0	0	multi-exon	FALSE	canonical	3	4109	junction_2	26	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTTGAAGACTGAATTAA	-2	True	NA	-27	True	AATAAA	-31	NA	64506289	64499635	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64503349_64503429_64504843_64506075
H1_mix_00038038	chr17	-	2234	13	FSM	ENSG00000108654.16	ENST00000578804.5	2021	13	6	-219	0	0	multi-exon	FALSE	canonical	3	133	junction_12	1099.4193511678	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTACAGTGATTTGAAA	963	False	NA	-86	True	NA	NA	NA	64505950	64499694	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64500327_64500548_64500774_64502009_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64505745
H1_mix_00038039	chr17	-	3815	12	FSM	ENSG00000108654.16	ENST00000578491.2	3815	12	0	0	0	0	multi-exon	FALSE	canonical	2	47	junction_1	1174.12019461593	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTACAGTGATTTGAAA	392	False	NA	-86	True	NA	NA	NA	64506521	64499694	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64501892_64502009_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075
H1_mix_00038045	chr17	-	3931	18	NIC	ENSG00000108854.16	novel	6240	19	NA	NA	4	520	combination_of_known_junctions	TRUE	canonical	3	32	junction_17	34.6938164469402	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGAAGCAACGAAAACTCT	32	True	NA	NA	False	NA	NA	NA	64662303	64544547	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_64545948_64546262_64546339_64547599_64547802_64551583_64551705_64554855_64554994_64555819_64555999_64557607_64557723_64561499_64561604_64562770_64562967_64571797_64571957_64578491_64578577_64580788_64580992_64583460_64583545_64586085_64586171_64591083_64591150_64593439_64593574_64598381_64598491_64661828
H1_mix_00038050	chr17	-	3425	5	FSM	ENSG00000214174.9	ENST00000430983.6	3430	5	5	0	-1	0	multi-exon	FALSE	canonical	3	54	junction_4	68.2440473594584	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTATGTACTGTGGTT	10	True	NA	NA	False	AATATA	-18	NA	64975568	64966549	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64968382_64972533_64972663_64972753_64972928_64973241_64973518_64974554
H1_mix_00038051	chr17	-	1636	6	FSM	ENSG00000214174.9	ENST00000687667.1	1628	6	-9	1	0	0	multi-exon	FALSE	canonical	3	31	junction_5	73.7547286619644	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCTTCTCATCTTACTG	2	True	NA	72	True	AATAAA	-15	NA	64975576	64968037	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64968382_64972533_64972663_64972753_64972928_64973241_64973518_64974554_64974642_64974950
H1_mix_00038052	chr17	-	2259	4	FSM	ENSG00000214174.9	ENST00000397713.5	2259	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	72.447682272566	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCTTCTCATCTTACTG	2	True	NA	72	True	AATAAA	-15	NA	64975576	64968037	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64968382_64972533_64972663_64972753_64973518_64974554
H1_mix_00038053	chr17	-	1149	6	FSM	ENSG00000214174.9	ENST00000693419.1	1068	6	-93	12	-81	0	multi-exon	FALSE	canonical	3	49	junction_5	69.9674209900579	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCTTCTCATCTTACTG	325	False	NA	72	True	AATAAA	-15	NA	64975698	64968037	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64968382_64972533_64972663_64972753_64972928_64973241_64973518_64974554_64974642_64975559
H1_mix_00038055	chr17	-	4460	2	NNC	ENSG00000120063.10	novel	6249	4	NA	NA	-103	-1426	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTTACCATTTCATTTA	-16	True	NA	-15	True	AATAAA	-15	NA	65056843	65010714	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_65014642_65056310
H1_mix_00038058	chr17	-	4424	11	NIC	ENSG00000168646.14	novel	4260	11	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_10	28.4754280038071	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGCCTCGTCTTTGAAT	461	False	NA	-5	True	ATTAAA	-19	NA	65561187	65528562	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_65530103_65533911_65534080_65535625_65535722_65536319_65536554_65536868_65537064_65537323_65537836_65538202_65538344_65541454_65541558_65549519_65549661_65557805_65558737_65560824
H1_mix_00038059	chr17	-	4262	11	FSM	ENSG00000168646.14	ENST00000307078.10	4260	11	3	-5	2	5	multi-exon	FALSE	canonical	3	17	junction_10	37.8085969059948	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCGTCTTTGAATCCCCA	3	True	NA	0	True	ATTAAA	-24	NA	65561645	65528557	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_65530103_65533911_65534080_65535625_65535722_65536319_65536554_65536868_65537064_65537323_65537836_65538202_65538344_65541454_65541558_65549519_65549661_65557805_65558737_65561449
H1_mix_00038060	chr17	-	4052	10	FSM	ENSG00000168646.14	ENST00000618960.4	4060	10	12	-4	12	0	multi-exon	FALSE	canonical	3	17	junction_9	42.7681085753288	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGCCTCGTCTTTGAAT	13	False	NA	-5	True	ATTAAA	-19	NA	65561635	65528562	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_65530103_65533911_65534080_65535625_65535722_65536319_65536554_65537323_65537836_65538202_65538344_65541454_65541558_65549519_65549661_65557805_65558737_65561449
H1_mix_00038062	chr17	-	13880	33	FSM	ENSG00000198265.12	ENST00000358691.10	13817	33	-61	-2	-61	2	multi-exon	TRUE	canonical	3	49	junction_4	15.2801635605611	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGATGTGTTTATTATGT	716	False	NA	-29	True	AATAAA	-18	NA	67245257	67070441	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_67078587_67086828_67087082_67107168_67107686_67108491_67108727_67109115_67109687_67114323_67114404_67120404_67120613_67122969_67123161_67123962_67124015_67128650_67128856_67135969_67136199_67137930_67138115_67145742_67145891_67148568_67148715_67149866_67149986_67151045_67151225_67160260_67160363_67160896_67161077_67166477_67166609_67167462_67167797_67178658_67178927_67188318_67188617_67189588_67189697_67190156_67190356_67193966_67194043_67195418_67195471_67201128_67201186_67203318_67203444_67215898_67215936_67218594_67218823_67239432_67239490_67243783_67243840_67245147
H1_mix_00038069	chr17	-	4356	11	FSM	ENSG00000197170.10	ENST00000356126.8	4356	11	0	0	0	0	multi-exon	FALSE	canonical	3	1173	junction_3	40.1950245677248	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCTTTTCAGTTCTCAT	9	True	NA	-3	True	AATAAA	-20	NA	67366577	67337915	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_67341053_67342185_67342264_67344605_67344781_67345744_67345858_67347115_67347251_67347335_67347486_67348549_67348655_67350228_67350337_67357302_67357432_67357518_67357579_67366411
H1_mix_00038070	chr17	-	3687	12	NNC	ENSG00000197170.10	novel	4356	11	NA	NA	-76	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	356.071076570743	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCTTTTCAGTTCTCAT	NA	False	NA	-3	True	AATAAA	-20	NA	67366681	67337915	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_67338622_67339394_67341053_67342185_67342264_67344605_67344781_67345744_67345858_67347115_67347251_67347335_67347486_67348549_67348655_67350228_67350337_67357302_67357432_67357518_67357579_67366411
H1_mix_00038072	chr17	-	1659	2	FSM	ENSG00000186665.10	ENST00000536693.1	1654	2	0	-5	0	2	multi-exon	FALSE	canonical	3	47	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGATGCACCTGTTTGTTT	18	True	NA	-21	True	AATAAA	-21	NA	67993552	67991096	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_67992104_67992900
H1_mix_00038073	chr17	-	1611	2	ISM	ENSG00000186665.10	ENST00000449250.3	1082	3	-104	-237	0	0	intron_retention	FALSE	canonical	3	136	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGATGCACCTGTTTGT	2801	False	NA	-23	True	AATAAA	-19	NA	67993649	67991098	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_67992104_67993043
H1_mix_00038074	chr17	-	2079	4	FSM	ENSG00000186665.10	ENST00000580729.3	2105	4	28	-2	28	2	multi-exon	FALSE	canonical	3	26	junction_3	45.2057026884392	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGATGCACCTGTTTGTTT	9	True	NA	-21	True	AATAAA	-21	NA	67996441	67991096	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_67992104_67993043_67993236_67993423_67993985_67996122
H1_mix_00038076	chr17	-	2027	13	FSM	ENSG00000070540.13	ENST00000262139.10	1908	13	17	-136	0	136	multi-exon	FALSE	canonical	1	61	junction_5	32.6045327455487	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGTCTGCTCTGAGATCTG	13	True	NA	NA	False	NA	NA	NA	68457479	68421144	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_68421821_68426074_68426176_68427134_68427254_68428828_68428937_68429995_68430161_68433467_68433576_68434555_68434627_68435619_68435713_68436381_68436480_68444492_68444590_68450727_68450898_68452909_68452993_68457341
H1_mix_00038077	chr17	-	1944	12	FSM	ENSG00000070540.13	ENST00000546360.5	1575	12	0	-369	0	136	multi-exon	FALSE	canonical	1	27	junction_11	51.7254353404302	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGTCTGCTCTGAGATCTG	13	True	NA	NA	False	NA	NA	NA	68457479	68421144	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_68421821_68426074_68426176_68427134_68427254_68428828_68428937_68429995_68430161_68433467_68433576_68434555_68434627_68435619_68435713_68436381_68436480_68444492_68444590_68450727_68450898_68457341
H1_mix_00038081	chr17	-	4688	11	FSM	ENSG00000108950.12	ENST00000592554.2	4688	11	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_7	23.1536174279528	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTTTCAAGTTACTACT	-1	True	NA	-14	True	AATAAA	-18	NA	68601367	68535115	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_68537742_68539336_68539397_68539884_68539967_68540848_68540959_68541984_68542166_68542693_68542810_68543628_68543722_68551872_68551952_68554776_68554828_68555558_68555744_68600262
H1_mix_00038082	chr17	-	4537	5	NIC	ENSG00000108950.12	novel	4688	11	NA	NA	-1622	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	50.0424819528368	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGAACTTTTCAAGTTAC	NA	False	NA	-18	True	AATAAA	-14	NA	68545291	68535119	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_68537742_68539336_68539397_68539884_68539967_68540848_68540959_68543628
H1_mix_00038084	chr17	-	2109	2	ISM	ENSG00000108950.12	ENST00000590074.5	1642	12	-1047	52005	-276	-48711	5prime_fragment	FALSE	canonical	3	20	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTCCTTTCTCCAAAATT	1505	False	NA	99	True	AGTAAA	-3	NA	68601643	68589621	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_68590350_68600262
H1_mix_00038086	chr17	-	1028	2	FSM	ENSG00000154265.16	ENST00000588106.1	1854	2	295	531	295	-531	multi-exon	FALSE	canonical	3	16	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTAGTTGAAAAGCACT	NA	False	NA	NA	False	NA	NA	NA	69251333	69249818	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_69249985_69250471
H1_mix_00038088	chr17	-	2768	10	FSM	ENSG00000133195.12	ENST00000542342.6	2752	10	0	-16	0	15	multi-exon	FALSE	canonical	0	0	junction_5	23.137271518771	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTACTTCTCAAAGCTGC	-7	True	NA	-2	True	AATAAA	-32	NA	73092688	72645933	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_72647663_72648802_72648962_72649169_72649269_72736649_72736720_72849633_72849805_72947730_72947876_73031555_73031715_73084807_73084847_73088656_73088776_73092610
H1_mix_00038089	chr17	-	2752	10	FSM	ENSG00000133195.12	ENST00000255559.8	2732	10	-5	-15	-5	15	multi-exon	FALSE	canonical	3	43	junction_5	12.7956396894305	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTACTTCTCAAAGCTGC	-12	True	NA	-2	True	AATAAA	-32	NA	73092693	72645933	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_72647663_72648802_72648962_72649169_72649269_72736649_72736720_72849633_72849805_72947751_72947876_73031555_73031715_73084807_73084847_73088656_73088776_73092610
H1_mix_00038091	chr17	-	278	1	FSM	ENSG00000266501.1	ENST00000578331.1	419	1	132	9	132	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATGGGGATGAACCACAAA	147	False	NA	NA	False	NA	NA	NA	73068156	73067878	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_73067900_73068200
H1_mix_00038095	chr17	-	3391	2	FSM	ENSG00000179604.10	ENST00000580315.1	1022	2	122	-2491	122	-3	multi-exon	FALSE	canonical	3	30	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACGCCTGGTGTCTGTCT	714	False	NA	-6	True	ATTAAA	-14	NA	73311286	73283627	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_73286613_73310880
H1_mix_00038096	chr17	-	3099	2	FSM	ENSG00000179604.10	ENST00000335793.4	3098	2	0	-1	0	1	multi-exon	FALSE	canonical	3	93	junction_1	0	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGTGTCTGTCTCTGCT	-1	True	NA	-1	True	ATTAAA	-19	NA	73312001	73283622	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_73286613_73311892
H1_mix_00038097	chr17	-	8419	28	NIC	ENSG00000069188.17	novel	11079	45	NA	NA	-1265	12	combination_of_known_junctions	TRUE	canonical	2	4	junction_21	3.25841739969226	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTTCCTTCCTGTTA	NA	False	NA	1	True	AATAAA	-27	NA	73415920	73334371	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_73338941_73348598_73348726_73350236_73350376_73350649_73350791_73352472_73352638_73358078_73358205_73361683_73361846_73365257_73365396_73368406_73368594_73379176_73379293_73379447_73379550_73383875_73384012_73385846_73385918_73386444_73386549_73387835_73388038_73390286_73390482_73391439_73391539_73393559_73393750_73394208_73394325_73395154_73395393_73398034_73398186_73398319_73398430_73399167_73399290_73401019_73401212_73401653_73401753_73401945_73402142_73414643_73414760_73415810
H1_mix_00038099	chr17	-	1731	3	FSM	ENSG00000204347.4	ENST00000375366.4	1727	3	0	-4	0	4	multi-exon	FALSE	canonical	3	83	junction_2	1	325	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGAACCACTCAGTTTC	17	True	NA	-2	True	AATAAA	-25	NA	74361868	74356411	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_74357732_74359968_74360246_74361734
H1_mix_00038100	chr17	-	913	2	Intergenic	novelGene_578	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	26	junction_1	0	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAATTGATGTCATGAATT	-4	True	NA	-10	True	AGTAAA	-10	NA	74644050	74639219	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_-_74639960_74643877
H1_mix_00038103	chr17	-	1880	7	FSM	ENSG00000109065.12	ENST00000580301.5	1860	7	0	-20	0	-18	multi-exon	FALSE	canonical	3	171	junction_2	27.8607649252892	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCGTTGCTTGCCGTGGCTC	8	True	NA	-19	True	TATAAA	-20	NA	74776339	74770546	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_74771859_74771959_74772055_74772217_74772278_74772895_74773040_74773575_74773686_74775621_74775708_74776266
H1_mix_00038120	chr17	-	1967	12	FSM	ENSG00000161513.12	ENST00000442102.6	1967	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_10	54.5431817708314	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAGGTTGGGAACATGCT	NA	False	NA	-48	True	NA	NA	NA	74873031	74862541	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_74862948_74863075_74863247_74863895_74864068_74864147_74864348_74864479_74864565_74864823_74864932_74865718_74865821_74866130_74866245_74866445_74866569_74866783_74867006_74872035_74872134_74872865
H1_mix_00038121	chr17	-	543	3	FSM	ENSG00000172782.13	ENST00000579663.1	905	3	0	362	0	-362	multi-exon	FALSE	canonical	1	3	junction_1	1	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTCGAGGGCTGGGCTGG	NA	False	NA	NA	False	NA	NA	NA	74882704	74879403	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_74879584_74881067_74881256_74882529
H1_mix_00038122	chr17	-	1795	6	FSM	ENSG00000167861.16	ENST00000532395.5	2165	6	371	-1	371	0	multi-exon	FALSE	canonical	3	57	junction_4	4.69041575982343	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGACTCTGTGGTTGAGG	7678	False	NA	-5	True	AATAAA	-16	NA	74954601	74950741	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_74951634_74951904_74952064_74952268_74952361_74953005_74953087_74953544_74953652_74954137
H1_mix_00038125	chr17	-	1720	12	ISM	ENSG00000167861.16	ENST00000425042.7	3298	19	27	7226	0	1	5prime_fragment	FALSE	canonical	3	80	junction_2	12.1824965889794	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTTATCTATCATCATC	-6	True	NA	NA	False	ATTAAA	-28	NA	74972732	74957967	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_74958220_74958326_74958479_74958672_74958764_74958910_74959052_74959880_74959938_74960025_74960249_74961872_74961990_74962233_74962341_74962964_74963082_74963739_74963911_74964482_74964633_74972590
H1_mix_00038126	chr17	-	613	6	FSM	ENSG00000167863.12	ENST00000301587.9	609	6	0	-4	0	4	multi-exon	FALSE	canonical	3	2482	junction_5	245.353133258982	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTGTGCTTCTTCTCTGT	-1	True	NA	-14	True	ATTAAA	-20	NA	75046969	75038858	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75039064_75039208_75039272_75040091_75040164_75042180_75042278_75042528_75042660_75046924
H1_mix_00038127	chr17	-	557	5	FSM	ENSG00000167863.12	ENST00000344546.8	553	5	0	-4	0	4	multi-exon	FALSE	canonical	3	19	junction_2	1242.25822597397	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTGTGCTTCTTCTCTGT	-17	False	NA	-14	True	ATTAAA	-20	NA	75046985	75038858	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75039064_75039208_75039272_75042180_75042278_75042528_75042660_75046924
H1_mix_00038130	chr17	-	901	5	FSM	ENSG00000125458.7	ENST00000245552.7	901	5	0	0	0	0	multi-exon	FALSE	canonical	3	529	junction_1	17.1664644001029	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTCTAGGACCCTTTATT	17	True	NA	-5	True	AATAAA	-17	NA	75131742	75130227	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75130643_75130752_75130868_75131044_75131106_75131180_75131282_75131533
H1_mix_00038131	chr17	-	1315	3	FSM	ENSG00000125458.7	ENST00000583655.5	1315	3	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	219.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTCTAGGACCCTTTATT	10	True	NA	-5	True	AATAAA	-17	NA	75131749	75130227	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75130643_75130752_75130868_75130964
H1_mix_00038133	chr17	-	726	5	FSM	ENSG00000125458.7	ENST00000582170.1	653	5	-55	-18	-42	18	multi-exon	FALSE	canonical	3	30	junction_1	228.111266709911	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGGCAGGCCCACAGGG	4158	False	NA	NA	False	NA	NA	NA	75131799	75130454	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75130638_75130752_75130868_75131044_75131106_75131180_75131282_75131533
H1_mix_00038134	chr17	-	844	4	FSM	ENSG00000125458.7	ENST00000578095.1	648	4	43	-239	0	0	multi-exon	FALSE	canonical	3	529	junction_1	17.9071680247511	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCACCCGGTACCTCCCG	5	True	NA	-109	True	NA	NA	NA	75131714	75130331	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75130643_75130752_75130868_75131044_75131282_75131533
H1_mix_00038139	chr17	-	1048	5	NNC	ENSG00000188612.12	novel	3166	4	NA	NA	0	8958	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1800.90491142648	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAAGATTGGCCAGGTGC	7	True	NA	NA	False	AAAAAG	-3	NA	75182956	75156627	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_75156657_75167729_75168402_75174751_75174824_75181056_75181189_75182813
H1_mix_00038141	chr17	-	3166	4	FSM	ENSG00000188612.12	ENST00000420826.7	3166	4	0	0	0	0	multi-exon	FALSE	canonical	3	3479	junction_3	432.653055769478	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTAGTATTATGTGTTA	4	True	NA	-7	True	AATATA	-17	NA	75182959	75165585	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75168402_75174751_75174824_75181056_75181189_75182813
H1_mix_00038144	chr17	-	3783	16	FSM	ENSG00000125447.18	ENST00000538886.5	3766	16	0	-17	0	17	multi-exon	FALSE	canonical	3	69	junction_13	74.3001719752758	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGACGCCATTCACCCTGA	10	True	NA	12	True	AATAAA	-33	NA	75261600	75236581	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75238390_75238651_75238763_75238913_75239084_75239374_75239572_75239788_75240109_75240341_75240413_75240811_75241058_75241399_75241517_75241614_75241697_75242335_75242474_75242830_75242912_75243062_75243167_75243446_75243571_75246508_75246585_75246711_75246797_75261547
H1_mix_00038145	chr17	-	3888	17	FSM	ENSG00000125447.18	ENST00000537686.6	3871	17	0	-17	0	17	multi-exon	FALSE	canonical	3	232	junction_6	45.7506403643709	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGACGCCATTCACCCTGA	4	True	NA	12	True	AATAAA	-33	NA	75261606	75236581	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75238390_75238651_75238763_75238913_75239084_75239374_75239572_75239788_75240109_75240341_75240413_75240811_75241058_75241399_75241517_75241614_75241697_75242335_75242474_75242830_75242912_75243062_75243167_75243446_75243571_75244618_75244718_75246508_75246585_75246711_75246797_75261547
H1_mix_00038146	chr17	-	3670	18	FSM	ENSG00000125447.18	ENST00000649398.1	3670	18	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	82.1044992002712	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAACCATTTTCACTG	-21	True	NA	-27	True	NA	NA	NA	75261631	75236620	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75237778_75237981_75238390_75238651_75238763_75238913_75239084_75239374_75239572_75239788_75240109_75240341_75240413_75240811_75241058_75241399_75241517_75241614_75241697_75242335_75242474_75242830_75242912_75243062_75243167_75243446_75243571_75244618_75244718_75246508_75246585_75246711_75246797_75261547
H1_mix_00038152	chr17	-	1363	7	FSM	ENSG00000125457.15	ENST00000245551.9	1358	7	0	-5	0	0	multi-exon	FALSE	canonical	2	4	junction_5	69.3821943216622	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTTCCTTTATATATCCA	-5	True	NA	NA	False	AATAAA	-19	NA	75271173	75266227	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75266968_75267537_75267631_75267745_75267902_75268082_75268193_75269346_75269449_75270113_75270246_75271143
H1_mix_00038153	chr17	-	1438	7	FSM	ENSG00000125457.15	ENST00000579297.5	1419	7	0	-19	0	0	multi-exon	FALSE	canonical	3	27	junction_4	62.8667020148363	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTTCCTTTATATATCCA	8	True	NA	NA	False	AATAAA	-19	NA	75271227	75266227	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75266968_75267537_75267631_75267745_75267902_75268082_75268193_75269346_75269470_75270113_75270246_75271143
H1_mix_00038156	chr17	-	1364	5	FSM	ENSG00000125457.15	ENST00000618645.5	1345	5	0	-19	0	0	multi-exon	FALSE	canonical	3	143	junction_4	18.6614576065215	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAATTTTCTAATAAATC	2	True	NA	NA	False	NA	NA	NA	75270414	75266263	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75266968_75267537_75267631_75267745_75267902_75268082_75268193_75270113
H1_mix_00038157	chr17	-	2072	6	FSM	ENSG00000125457.15	ENST00000579194.6	2058	6	0	-14	0	0	multi-exon	FALSE	canonical	3	27	junction_4	68.044103344816	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAATTTTCTAATAAATC	236	False	NA	NA	False	NA	NA	NA	75270999	75266263	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75266968_75267537_75267631_75267745_75267902_75268082_75268193_75269346_75269470_75270113
H1_mix_00038160	chr17	-	2349	6	FSM	ENSG00000125454.12	ENST00000402418.7	2331	6	0	-18	0	6	multi-exon	FALSE	canonical	3	132	junction_4	7.98498591107085	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCCTGGCACATCTGCC	1743	False	NA	1	True	ATTAAA	-30	NA	75287674	75272974	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75273640_75277352_75277484_75278151_75278336_75283422_75283594_75286303_75286460_75286632
H1_mix_00038161	chr17	-	1332	6	NIC	ENSG00000125454.12	novel	1496	7	NA	NA	-6	6	combination_of_known_junctions	FALSE	canonical	3	9	junction_5	53.794423502813	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCCTGGCACATCTGCC	39	False	NA	1	True	ATTAAA	-30	NA	75289378	75272974	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_75273640_75277352_75277484_75278151_75278336_75283422_75283594_75286303_75286460_75289353
H1_mix_00038166	chr17	-	559	2	FSM	ENSG00000125454.12	ENST00000579228.1	568	2	0	9	0	-9	multi-exon	FALSE	canonical	3	21	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTAGCCCAGGCTGGAGT	-32	True	NA	NA	False	NA	NA	NA	75289449	75288128	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75288592_75289353
H1_mix_00038167	chr17	-	3182	5	FSM	ENSG00000177885.15	ENST00000392564.5	3182	5	0	0	0	0	multi-exon	FALSE	canonical	3	903	junction_1	67.3772031179686	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTATCTTTTTTTCCCC	-22	True	NA	-6	True	AATAAA	-19	NA	75393864	75318075	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75320554_75321658_75321828_75325897_75326021_75332699_75332798_75393550
H1_mix_00038168	chr17	-	3273	6	FSM	ENSG00000177885.15	ENST00000316804.10	3273	6	0	0	0	0	multi-exon	FALSE	canonical	3	800	junction_5	105.915815627318	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTATCTTTTTTTCCCC	5	True	NA	-6	True	AATAAA	-19	NA	75405678	75318075	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75320554_75321658_75321828_75325897_75326021_75332699_75332798_75393550_75393766_75405488
H1_mix_00038173	chr17	-	3685	20	FSM	ENSG00000108469.15	ENST00000317905.10	3669	20	0	-16	0	7	multi-exon	FALSE	canonical	0	0	junction_19	24.3662042870313	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTATTTCCTCAGCAGC	-6	True	NA	0	True	NA	NA	NA	75667154	75626837	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75627523_75627622_75627693_75628217_75628443_75628671_75628763_75628933_75629476_75629707_75629843_75630183_75630278_75630618_75630693_75630778_75630838_75630973_75631011_75631149_75631250_75631449_75631669_75651185_75651266_75658297_75658461_75660954_75661067_75661605_75661709_75662478_75662998_75665050_75665173_75666427_75666572_75667043
H1_mix_00038174	chr17	-	4141	19	ISM	ENSG00000108469.15	ENST00000317905.10	3669	20	0	0	0	0	intron_retention	FALSE	canonical	3	64	junction_5	13.4618803375391	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTTTCTCCAGGGAGTT	-6	True	NA	-16	True	AATAAA	-36	NA	75667154	75626853	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_75627523_75627622_75627693_75628217_75628443_75628671_75628763_75628933_75629476_75629707_75629843_75630183_75630278_75630618_75630693_75630778_75630838_75630973_75631011_75631149_75631250_75631449_75631669_75651185_75651266_75658297_75658461_75660954_75661067_75661605_75661709_75662478_75662998_75665050_75665173_75666427
H1_mix_00038177	chr17	-	1529	9	NNC	ENSG00000108479.13	novel	1397	8	NA	NA	-103	36989	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	95.7398003705878	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGGCGCGTACCTGTA	2432	False	NA	NA	False	AAAAAG	-8	NA	75765339	75714604	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_75714640_75757943_75758128_75758209_75758373_75758448_75758600_75762703_75762886_75763013_75763150_75763319_75763440_75763896_75764087_75764971
H1_mix_00038179	chr17	-	1216	8	FSM	ENSG00000108479.13	ENST00000592997.6	1251	8	0	35	0	-35	multi-exon	FALSE	canonical	3	11	junction_4	97.9714660667345	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTAGAGGTGGGTGTATGC	2635	False	NA	-4	True	AATAAA	-29	NA	75765136	75757928	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75758128_75758209_75758373_75758448_75758600_75762703_75762796_75763013_75763150_75763319_75763440_75763896_75764087_75764971
H1_mix_00038180	chr17	-	1362	8	FSM	ENSG00000108479.13	ENST00000588479.6	1397	8	0	35	0	-35	multi-exon	FALSE	canonical	3	263	junction_2	16.1637033541961	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTAGAGGTGGGTGTATGC	-19	True	NA	-4	True	AATAAA	-29	NA	75765192	75757928	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75758128_75758209_75758373_75758448_75758600_75762703_75762886_75763013_75763150_75763319_75763440_75763896_75764087_75764971
H1_mix_00038183	chr17	-	1701	1	FSM	ENSG00000132475.10	ENST00000586518.1	1701	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATATATTGTAGTATCA	5	True	NA	-61	True	AGTAAA	-43	NA	75779772	75778071	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75778100_75779800
H1_mix_00038185	chr17	-	584	3	FSM	ENSG00000132475.10	ENST00000589417.1	575	3	0	-9	0	0	multi-exon	FALSE	canonical	3	13122	junction_2	1322	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATCCAGTTGGCTCGCC	-2	True	NA	-152	True	NA	NA	NA	75779779	75778637	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75778724_75778809_75779185_75779656
H1_mix_00038189	chr17	-	2146	4	FSM	ENSG00000132471.12	ENST00000589236.1	747	4	-335	-1064	0	0	multi-exon	FALSE	canonical	3	454	junction_1	35.565276448931	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAACTGGACCCTTTCTGG	-7	True	NA	-16	True	AGTAAA	-6	NA	75848662	75845708	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75846788_75846907_75846985_75847486_75847610_75847795
H1_mix_00038190	chr17	-	1895	8	FSM	ENSG00000132471.12	ENST00000585462.5	1895	8	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_7	182.863504353629	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAACTGGACCCTTTCTGG	0	True	NA	-16	True	AGTAAA	-6	NA	75855322	75845708	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75846788_75846907_75846985_75847486_75847610_75847795_75847931_75848569_75848663_75849603_75849740_75851567_75851677_75855179
H1_mix_00038194	chr17	-	3401	6	FSM	ENSG00000141569.12	ENST00000269383.8	3384	6	0	-17	0	17	multi-exon	FALSE	canonical	3	199	junction_1	9.93176721434811	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACCCCCAATATATATAAT	29	True	NA	14	True	AATAAA	-32	NA	75896951	75888945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75891348_75891812_75891879_75892010_75892186_75892266_75892501_75892754_75892851_75896523
H1_mix_00038198	chr17	-	1358	9	FSM	ENSG00000204316.13	ENST00000309352.4	1358	9	0	0	0	0	multi-exon	FALSE	canonical	3	1042	junction_1	26.0612259880459	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGGCTCACACCTGTA	13	True	NA	-11	True	AATAAA	-18	NA	75904884	75898643	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75898987_75899157_75899295_75899515_75899675_75900981_75901028_75901200_75901274_75901711_75901921_75902019_75902155_75904539_75904720_75904808
H1_mix_00038208	chr17	-	4603	30	FSM	ENSG00000188878.20	ENST00000636174.2	4874	30	1	270	1	0	multi-exon	TRUE	canonical	3	12	junction_5	11.3615326125303	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCGGAGTTTATACTTATT	16	True	NA	-26	True	NA	NA	NA	75941041	75909843	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75910807_75912191_75912308_75913701_75913820_75913912_75914051_75914121_75914299_75914746_75914933_75915016_75915140_75917731_75917851_75917930_75918071_75918161_75918270_75919667_75919875_75920006_75920108_75920273_75920430_75921243_75921303_75921471_75921561_75921944_75922047_75923185_75923642_75925346_75925447_75926029_75926164_75926287_75926427_75926757_75926878_75927454_75927533_75928075_75928194_75929996_75930048_75931228_75931290_75932994_75933089_75935631_75935674_75937565_75937594_75938146_75938233_75940847
H1_mix_00038210	chr17	-	7319	14	FSM	ENSG00000161533.12	ENST00000293217.10	7317	14	0	-2	0	2	multi-exon	FALSE	canonical	3	45	junction_12	20.1896335225568	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTAATCTTTTTGTGGG	-14	True	NA	2	True	AATAAA	-41	NA	75979166	75941504	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75946796_75948250_75948458_75949216_75949361_75949494_75949601_75949717_75949898_75950773_75950965_75951414_75951578_75953450_75953621_75955565_75955682_75955827_75955948_75957458_75957567_75960214_75960376_75978533_75978694_75978964
H1_mix_00038215	chr17	-	2526	18	FSM	ENSG00000182473.22	ENST00000332065.9	4596	18	-92	2162	0	340	multi-exon	FALSE	canonical	3	604	junction_12	59.1032174371132	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACATTCCCGCCCGCCCA	-33	True	NA	NA	False	NA	NA	NA	76103787	76083178	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_76083751_76084005_76084140_76084247_76084290_76084516_76084581_76085313_76085410_76085676_76085798_76086079_76086146_76087653_76087721_76088059_76088123_76088463_76088563_76088770_76088924_76089174_76089321_76094413_76094582_76097795_76098019_76101270_76101377_76101678_76101864_76103360_76103427_76103632
H1_mix_00038217	chr17	-	2031	19	FSM	ENSG00000182473.22	ENST00000411744.6	2031	19	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_13	216.040519747661	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCTGCTAGCCCTGCCT	7	True	NA	-109	True	NA	NA	NA	76103692	76083647	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_76083751_76084005_76084140_76084247_76084290_76084516_76084581_76085313_76085410_76085676_76085798_76086079_76086146_76087653_76087721_76088059_76088123_76088463_76088563_76088770_76088924_76089174_76089321_76090328_76090398_76094413_76094582_76097795_76098019_76101270_76101377_76101678_76101864_76103360_76103427_76103632
H1_mix_00038223	chr17	-	2937	18	FSM	ENSG00000141576.16	ENST00000319945.10	2937	18	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	17.9034318490148	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAAGG	329	False	NA	NA	False	NA	NA	NA	76240308	76144339	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_76145354_76152354_76152466_76154282_76154329_76155561_76155735_76156209_76156322_76158392_76158502_76159334_76159574_76161534_76161648_76161842_76162003_76162551_76162624_76164747_76164796_76165501_76165546_76166460_76166528_76167008_76167127_76167650_76167798_76173701_76173791_76212363_76212483_76240152
H1_mix_00038228	chr17	-	3442	10	FSM	ENSG00000161542.17	ENST00000446526.8	3435	10	0	-7	0	7	multi-exon	FALSE	canonical	3	444	junction_1	20.932578424699	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAATTGTTAACACCAGAT	-23	True	NA	NA	False	NA	NA	NA	76353916	76309470	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_76311701_76312869_76313017_76313820_76313892_76328716_76328863_76330042_76330099_76330550_76330667_76332262_76332436_76344670_76344738_76348528_76348582_76353533
H1_mix_00038229	chr17	-	1678	10	FSM	ENSG00000161542.17	ENST00000324684.8	1678	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	152.255632991945	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTAGTCTTTTCATTAG	-1	False	NA	-43	True	AATAAA	-13	NA	76354198	76310933	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_76311701_76312869_76313017_76313820_76313892_76328716_76328863_76330042_76330099_76330550_76330667_76332262_76332436_76344670_76344738_76348528_76348582_76354116
H1_mix_00038234	chr17	-	2663	12	FSM	ENSG00000129667.13	ENST00000590168.5	2665	12	0	2	0	-2	multi-exon	TRUE	canonical	2	32	junction_11	16.3838259288274	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTCTTTAACGGAGACC	7069	False	NA	-13	True	ATTAAA	-21	NA	76477731	76470892	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_76472053_76472685_76473106_76473251_76473328_76473647_76473743_76473838_76473903_76474032_76474143_76474372_76474535_76474729_76474805_76475029_76475142_76476829_76477025_76477179_76477299_76477656
H1_mix_00038240	chr17	-	2186	4	FSM	ENSG00000161544.10	ENST00000293230.10	1962	4	-224	0	-224	0	multi-exon	FALSE	canonical	3	13	junction_3	4.08248290463863	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGCACACTCGTGCAGT	19	False	NA	-7	True	ATTAAA	-20	NA	76537933	76527355	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_76528612_76530978_76531143_76531459_76531692_76537399
H1_mix_00038241	chr17	-	1904	9	FSM	ENSG00000070731.11	ENST00000225276.10	1904	9	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_5	6.32331993497087	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGCGTCAGTAAATTTG	-18	True	NA	-2	True	AATAAA	-15	NA	76585860	76565376	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_76566272_76567452_76567553_76568712_76568797_76570564_76570669_76572636_76572776_76573194_76573364_76574364_76574540_76578755_76578817_76585683
H1_mix_00038243	chr17	-	2381	2	Intergenic	novelGene_580	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGCTCCCACTCTGGCCA	6037	False	NA	NA	False	NA	NA	NA	76608379	76604182	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_-_76604208_76606023
H1_mix_00038244	chr17	-	1801	3	Intergenic	novelGene_581	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	4.5	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGCTCCCACTCTGGCCA	3882	False	NA	NA	False	NA	NA	NA	76610534	76604182	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_-_76604208_76606023_76606409_76609143
H1_mix_00038250	chr17	-	1662	6	FSM	ENSG00000070495.15	ENST00000397625.9	1621	6	0	-41	0	36	multi-exon	FALSE	canonical	3	115	junction_3	12.7216351150314	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTCTTCTCCTCATGG	7	True	NA	13	True	NA	NA	NA	76726606	76718409	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_76718861_76720359_76720499_76721797_76721934_76723771_76724059_76725466_76725856_76726346
H1_mix_00038251	chr17	-	1888	3	FSM	ENSG00000161547.17	ENST00000359995.10	1888	3	0	0	0	0	multi-exon	FALSE	canonical	3	2084	junction_1	176	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTCTCGGTCTTTTTTTC	0	True	NA	-2	True	ATTAAA	-31	NA	76737331	76734114	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_76735159_76736153_76736465_76736798
H1_mix_00038252	chr17	-	2885	2	FSM	ENSG00000161547.17	ENST00000392485.2	2885	2	0	0	0	0	multi-exon	FALSE	canonical	3	2436	junction_1	0	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTCTCGGTCTTTTTTTC	-2	True	NA	-2	True	ATTAAA	-31	NA	76737333	76734114	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_76736465_76736798
H1_mix_00038253	chr17	-	1357	5	FSM	ENSG00000161547.17	ENST00000452355.7	1357	5	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_3	1007.45930438902	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAAGGAAGCAAATGGTT	0	True	NA	NA	False	NA	NA	NA	76737331	76734251	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_76734563_76735060_76735159_76735771_76735876_76736153_76736465_76736798
H1_mix_00038255	chr17	-	8387	20	FSM	ENSG00000141524.17	ENST00000590602.6	8387	20	0	0	0	0	multi-exon	TRUE	canonical	3	151	junction_19	50.244885077531	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCGATGCATGTTCTTCA	-5	True	NA	2	True	AATAAA	-22	NA	78128755	78107396	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_78113212_78113547_78113625_78117268_78117348_78117467_78117645_78117801_78117936_78118970_78119047_78119296_78119393_78120652_78120833_78121012_78121165_78121555_78121712_78122604_78122750_78123988_78124180_78124523_78124782_78124888_78124986_78125157_78125264_78125725_78125885_78126276_78126367_78126523_78126649_78126776_78126907_78128611
H1_mix_00038262	chr17	-	1529	6	FSM	ENSG00000167900.12	ENST00000588734.5	1681	6	152	0	-18	0	multi-exon	FALSE	canonical	3	892	junction_1	100.712263404215	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTTATGAAATTAACTAAT	1	True	NA	NA	False	GGGGCT	-45	NA	78187081	78174120	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_78175170_78175528_78175619_78182588_78182683_78185054_78185166_78186786_78186819_78186928
H1_mix_00038266	chr17	-	4787	1	FSM	ENSG00000108669.17	ENST00000586299.1	4423	1	-371	7	-371	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCCATCTTTGTTGTTC	2212	False	NA	-9	True	AATAAA	-13	NA	78678842	78674055	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_78674100_78678800
H1_mix_00038268	chr17	-	602	4	FSM	ENSG00000055483.20	ENST00000588130.5	602	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	72.866697163763	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGGGTGCTTCCTTGT	6869	False	NA	1	True	AATACA	-24	NA	78799722	78787380	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_78787659_78798399_78798552_78798907_78799024_78799666
H1_mix_00038269	chr17	-	5885	21	FSM	ENSG00000055483.20	ENST00000589225.5	5885	21	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	41.9087997919291	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCACCGTTCTGACTGCT	30	True	NA	-85	True	NA	NA	NA	78840780	78787466	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_78787659_78796316_78798552_78798907_78799024_78799666_78799769_78802323_78802536_78803384_78803979_78806155_78806287_78806958_78807637_78812859_78813002_78813772_78813874_78814411_78814553_78818666_78818779_78819929_78820013_78820990_78821062_78821936_78822005_78827244_78827348_78828896_78829008_78835279_78835502_78836110_78836373_78838586_78838751_78840735
H1_mix_00038270	chr17	-	5923	21	FSM	ENSG00000055483.20	ENST00000449938.7	5872	21	-50	-1	8	1	multi-exon	FALSE	canonical	3	77	junction_1	30.1135766723251	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTCTTTGTTGGTTT	573	False	78840893	-3	True	AATAAA	-19	NA	78840864	78795650	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_78797880_78798399_78798552_78798907_78799024_78799666_78799769_78802323_78802536_78803384_78803979_78806155_78806287_78806958_78807637_78812859_78813002_78813772_78813874_78814411_78814553_78818666_78818779_78819929_78820013_78820990_78821062_78821936_78822005_78827244_78827348_78828896_78829008_78835279_78835502_78836110_78836373_78838586_78838751_78840735
H1_mix_00038278	chr17	-	3652	5	FSM	ENSG00000035862.12	ENST00000262768.11	3652	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_4	4.41588043316392	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGGCTCTCTCCGTGTGG	-1	True	NA	-9	True	AATAAA	-19	NA	78925387	78852976	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_78855865_78857521_78857647_78870897_78871007_78873818_78873920_78924958
H1_mix_00038279	chr17	-	2179	7	NNC	ENSG00000108679.13	novel	2202	6	NA	NA	0	32358	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	146.781489144768	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAGAGAGTGAGCCAGT	67	False	NA	NA	False	NA	NA	NA	78979875	78938879	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_78938907_78971256_78972705_78972969_78973223_78974687_78974820_78975964_78976157_78977139_78977215_78979823
H1_mix_00038281	chr17	-	2238	7	NNC	ENSG00000108679.13	novel	2202	6	NA	NA	0	32358	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	146.781489144768	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAGAGAGTGAGCCAGT	7	True	NA	NA	False	NA	NA	NA	78979935	78938879	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_78938906_78971256_78972705_78972969_78973223_78974687_78974820_78975964_78976157_78977139_78977215_78979823
H1_mix_00038282	chr17	-	1942	5	FSM	ENSG00000108679.13	ENST00000591778.5	1961	5	0	19	0	-1	multi-exon	FALSE	canonical	1	1	junction_1	166.459454522716	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTTGTTTGTACAGAAA	24	True	NA	-17	True	ATTAAA	-17	NA	78979918	78971256	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_78972705_78974687_78974820_78975964_78976157_78977139_78977215_78979823
H1_mix_00038285	chr17	-	3395	5	FSM	ENSG00000171302.17	ENST00000392446.10	3287	5	-16	-92	0	92	multi-exon	FALSE	canonical	3	68	junction_3	33.8775368053818	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCAGGGCATCCCATCTGG	10	False	NA	82	True	NA	NA	NA	79009780	78991623	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_78993921_78995017_78995222_78996991_78997645_78997839_78997964_79009663
H1_mix_00038286	chr17	-	3248	5	NIC	ENSG00000171302.17	novel	3287	5	NA	NA	3	0	intron_retention	FALSE	canonical	3	30	junction_1	50.0618367621485	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTCTGTCTCCCGGTCTG	-9	True	NA	-10	True	AATAAA	-18	NA	79009799	78991715	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_78992141_78992409_78993921_78995017_78995222_78996991_78997964_79009663
H1_mix_00038287	chr17	-	3522	4	FSM	ENSG00000171302.17	ENST00000302345.6	3534	4	12	0	-3	0	multi-exon	FALSE	canonical	3	134	junction_2	8.5764535535124	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTCTGTCTCCCGGTCT	NA	False	NA	-11	True	AATAAA	-17	NA	79009805	78991716	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_78993921_78995017_78995222_78996991_78997964_79009663
H1_mix_00038289	chr17	-	778	3	FSM	ENSG00000171302.17	ENST00000591811.1	466	3	89	-401	0	0	multi-exon	FALSE	canonical	3	68	junction_1	43.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATGGGAAACTCTACTCC	12	False	NA	NA	False	NA	NA	NA	79009778	78997105	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_78997645_78997839_78997964_79009663
H1_mix_00038292	chr17	-	716	5	ISM	ENSG00000167281.20	ENST00000581393.5	1201	6	990	-238	208	222	3prime_fragment	FALSE	canonical	3	76	junction_1	11.0538454847171	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCCTTGTGGGACCCGTG	NA	False	NA	NA	False	NA	NA	NA	79097518	79090577	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_79090886_79094450_79094530_79095512_79095575_79096652_79096693_79097291
H1_mix_00038293	chr17	-	2640	12	NIC	ENSG00000167281.20	novel	1519	15	NA	NA	102	23	combination_of_known_junctions	FALSE	canonical	3	20	junction_8	29.2617144727423	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGGGCATGGTGGGTGGAG	353	False	NA	22	True	NA	NA	NA	79183370	79089321	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_79090886_79094450_79094530_79095512_79095575_79096652_79096693_79097291_79097425_79097691_79097746_79101583_79101645_79103161_79103255_79104072_79104127_79106650_79106789_79115493_79115749_79183263
H1_mix_00038294	chr17	-	1017	4	FSM	ENSG00000167281.20	ENST00000582880.6	877	4	-140	0	-140	0	multi-exon	FALSE	canonical	3	19	junction_1	39.6063967897443	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGCCGACGTAGTCAC	NA	False	NA	-20	True	ATTAAA	-15	NA	79096833	79091946	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_79092642_79094450_79094530_79095512_79095575_79096652
H1_mix_00038298	chr17	-	10960	12	FSM	ENSG00000167291.16	ENST00000310924.7	10960	12	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_7	34.8640808315866	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGTTTGTGGATTATTG	0	True	NA	NA	False	AATAAA	-23	NA	80035872	79932342	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_79941108_79942059_79942207_79944907_79945088_79947644_79947832_79948871_79949007_79949716_79949866_79950410_79950579_79951449_79951598_79952656_79952819_80010159_80010758_80013366_80013610_80035794
H1_mix_00038299	chr17	-	10972	12	NNC	ENSG00000167291.16	novel	10960	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_7	77.683613469334	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGTTTGTGGATTATTG	0	True	NA	NA	False	AATAAA	-23	NA	80035872	79932342	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_79941108_79942059_79942207_79944907_79945088_79947644_79947832_79948871_79949007_79949716_79949866_79950410_79950595_79951449_79951598_79952656_79952819_80010159_80010758_80013366_80013606_80035794
H1_mix_00038300	chr17	-	7672	12	NIC	ENSG00000167291.16	novel	10960	12	NA	NA	0	164	combination_of_known_junctions	FALSE	canonical	3	43	junction_7	52.500767408795	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACGCTGTACAGTGCCTC	0	True	NA	-16	True	AATAAA	-18	NA	80035872	79935627	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_79941108_79942059_79942207_79944907_79945088_79947644_79947832_79948871_79949007_79949716_79949866_79950410_79950576_79951449_79951598_79952656_79952819_80010159_80010758_80013366_80013610_80035794
H1_mix_00038301	chr17	-	2535	12	FSM	ENSG00000141543.12	ENST00000649764.2	2524	12	0	-11	0	11	multi-exon	FALSE	canonical	3	992	junction_7	86.4504826499726	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACCTGTAGCTTTATAGG	-2	True	NA	14	True	ATTAAA	-34	NA	80147128	80134357	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_80135507_80136003_80136132_80136227_80136336_80137385_80137502_80138141_80138281_80139020_80139163_80139669_80139751_80140007_80140141_80141318_80141382_80141781_80141849_80144171_80144245_80146792
H1_mix_00038303	chr17	-	706	4	FSM	ENSG00000141543.12	ENST00000576573.1	697	4	0	-9	0	0	multi-exon	FALSE	canonical	3	1233	junction_3	19.131126469709	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTATACTTCTAAGGTGCC	9562	False	NA	-40	True	ATTAAA	-23	NA	80137603	80135254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_80135507_80136003_80136132_80136227_80136336_80137385
H1_mix_00038304	chr17	-	1664	13	NNC	ENSG00000141543.12	novel	1579	13	NA	NA	-103	0	at_least_one_novel_splicesite	TRUE	canonical	3	362	junction_12	235.222279627873	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTAAGTCTTTTTCATTA	NA	False	NA	29	True	AATACA	-3	NA	80147254	80135298	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_80135507_80136003_80136132_80136227_80136336_80137385_80137502_80138141_80138281_80139020_80139163_80139669_80139751_80140007_80140141_80141318_80141382_80141781_80141849_80144171_80144245_80146792_80147005_80147060
H1_mix_00038313	chr17	-	5439	5	FSM	ENSG00000171246.6	ENST00000306773.5	5439	5	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_4	15.4434452114805	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCTCCTCAGGATGTC	-2	True	NA	-7	True	AGTAAA	-15	NA	80476607	80466833	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_80471035_80471731_80471912_80473199_80473445_80475510_80475719_80476002
H1_mix_00038314	chr17	-	556	3	FSM	ENSG00000171246.6	ENST00000571100.1	556	3	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_1	11	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCTTTTGTCATCAATGA	793	False	NA	NA	False	NA	NA	NA	80475812	80471902	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_80471912_80473199_80473445_80475510
H1_mix_00038316	chr17	-	1159	5	ISM	ENSG00000141577.14	ENST00000571292.1	619	6	677	-232	677	1	3prime_fragment	FALSE	canonical	3	148	junction_3	16.5736990439672	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGAGTGACTGCCTTGT	5380	False	NA	-10	True	AGTAAA	-20	NA	81191699	81189594	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_81189844_81189914_81189976_81190638_81190803_81190906_81191085_81191192
H1_mix_00038319	chr17	-	3637	26	NIC	ENSG00000141577.14	novel	3673	26	NA	NA	0	1	combination_of_known_junctions	TRUE	canonical	3	21	junction_5	38.6613191704577	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGAGTGACTGCCTTGT	6	True	NA	-10	True	AGTAAA	-20	NA	81222965	81189594	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_81189844_81189914_81189976_81190638_81190803_81190906_81191085_81191192_81191333_81192317_81192393_81192475_81192594_81192735_81192844_81193925_81194128_81194869_81194973_81195834_81195952_81196700_81196827_81196929_81197056_81197711_81197889_81198105_81198298_81198876_81198972_81199380_81199550_81199718_81199836_81200328_81200447_81202239_81202399_81203493_81203608_81206743_81206872_81207124_81207240_81208927_81209023_81219879_81220074_81222768
H1_mix_00038320	chr17	-	3673	26	FSM	ENSG00000141577.14	ENST00000269392.8	3673	26	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_14	33.6647946674267	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTTGAGTGACTGCCTTG	8396	False	NA	-11	True	AGTAAA	-19	NA	81222999	81189595	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81189844_81189914_81189976_81190638_81190803_81190906_81191085_81191192_81191336_81192317_81192393_81192475_81192594_81192735_81192844_81193925_81194128_81194869_81194973_81195834_81195952_81196700_81196827_81196929_81197056_81197711_81197889_81198105_81198298_81198876_81198972_81199380_81199550_81199718_81199836_81200328_81200447_81202239_81202399_81203493_81203608_81206743_81206872_81207124_81207240_81208927_81209023_81219879_81220074_81222768
H1_mix_00038322	chr17	-	3878	13	NIC	ENSG00000167302.11	novel	2455	13	NA	NA	0	2	intron_retention	TRUE	canonical	3	15	junction_12	22.6292583469572	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCGCTTATTTTTCTTT	4	True	NA	-3	True	AATAAA	-21	NA	81239041	81228274	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_81229477_81230543_81230679_81231397_81231477_81231577_81231692_81231846_81232022_81232314_81232519_81233431_81233504_81233637_81233717_81233980_81234049_81236707_81236802_81236979_81237072_81237386_81237460_81237550
H1_mix_00038323	chr17	-	3969	12	ISM	ENSG00000167302.11	ENST00000637944.2	2455	13	14	-2	0	2	intron_retention	FALSE	canonical	3	69	junction_8	12.0850977148246	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCGCTTATTTTTCTTT	4	True	NA	-3	True	AATAAA	-21	NA	81239041	81228274	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_81229477_81230543_81230679_81231397_81231477_81231577_81231692_81231846_81232022_81232314_81232519_81233431_81233504_81233637_81233717_81233980_81234049_81236707_81236802_81236979_81237072_81237386
H1_mix_00038324	chr17	-	2457	13	FSM	ENSG00000167302.11	ENST00000637944.2	2455	13	0	-2	0	2	multi-exon	FALSE	canonical	3	59	junction_12	13.6737786373124	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCGCTTATTTTTCTTT	-10	True	NA	-3	True	AATAAA	-21	NA	81239055	81228274	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81229477_81230543_81230679_81231397_81231477_81231577_81231692_81231846_81232022_81232314_81232519_81233431_81233504_81233637_81233717_81233980_81234049_81236707_81236802_81236979_81237072_81237386_81237460_81238985
H1_mix_00038325	chr17	-	2271	12	FSM	ENSG00000167302.11	ENST00000300714.7	2287	12	17	-1	-17	1	multi-exon	FALSE	canonical	3	25	junction_5	22.0555272208972	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCCGCTTATTTTTCTT	15	False	NA	-4	True	AATAAA	-20	NA	81239074	81228275	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81229477_81230543_81230679_81231397_81231477_81231577_81231692_81231846_81232022_81233431_81233504_81233637_81233717_81233980_81234049_81236707_81236802_81236979_81237072_81237386_81237460_81238985
H1_mix_00038330	chr17	-	1627	1	FSM	ENSG00000157637.13	ENST00000573058.1	1627	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAAACTTCTCGCCCCTT	NA	False	NA	-17	True	AATAAA	-18	NA	81252503	81250876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81250900_81252500
H1_mix_00038333	chr17	-	6913	1	FSM	ENSG00000287431.1	ENST00000665286.1	6784	1	-160	31	-160	-31	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTGTTATGTAATAAAAAAC	5457	False	NA	NA	False	AATGAA	-27	NA	81346126	81339213	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81339200_81346100
H1_mix_00038344	chr17	-	1961	5	FSM	ENSG00000184009.13	ENST00000576917.5	1958	5	0	-3	0	0	multi-exon	FALSE	canonical	3	13923	junction_4	1082.03220261691	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGCTGCCGTAACCAATG	1975	False	NA	16	True	NA	NA	NA	81512780	81509988	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81510834_81510926_81511627_81511902_81512143_81512231_81512361_81512733
H1_mix_00038345	chr17	-	2256	5	FSM	ENSG00000184009.13	ENST00000575842.5	2256	5	0	0	0	0	multi-exon	FALSE	canonical	3	15646	junction_4	470.7878370349	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGCTGCCGTAACCAATG	1974	False	NA	16	True	NA	NA	NA	81512781	81509988	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81510834_81510926_81511109_81511187_81511627_81511902_81512143_81512231
H1_mix_00038348	chr17	-	3603	9	FSM	ENSG00000185504.17	ENST00000327787.13	3597	9	0	-6	0	0	multi-exon	FALSE	canonical	0	0	junction_3	57.6550897579737	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTCGGCTGTTTTCTCTC	-2	True	NA	-1	True	NA	NA	NA	81552353	81539884	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81540951_81541308_81541396_81544003_81544121_81545745_81545883_81546908_81547679_81549205_81549363_81550247_81551204_81551927_81552053_81552165
H1_mix_00038349	chr17	-	3891	9	FSM	ENSG00000185504.17	ENST00000443656.6	3822	9	23	-92	0	92	multi-exon	FALSE	canonical	0	0	junction_3	59.5288795459817	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCTCTGAGGAAGACGCG	-2	True	NA	91	True	NA	NA	NA	81552353	81539792	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81540951_81541308_81541396_81544003_81544121_81545745_81545883_81546908_81547679_81549205_81549363_81550247_81551204_81551731_81552053_81552165
H1_mix_00038351	chr17	-	2991	5	NNC	ENSG00000185504.17	novel	2996	5	NA	NA	-412	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	81.8336727759423	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGGCCTCGGCTGTTTTC	4220	False	NA	-5	True	NA	NA	NA	81548910	81539888	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_81540951_81541308_81541396_81544003_81544121_81545745_81545883_81547322
H1_mix_00038354	chr17	-	2365	15	FSM	ENSG00000182446.14	ENST00000574897.5	2365	15	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_11	176.845155951961	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCACCAGAGTGCCCGGGA	5	True	NA	NA	False	NA	NA	NA	81637079	81564908	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81565608_81567416_81567534_81569015_81569112_81572016_81572089_81588943_81589105_81596115_81596243_81597244_81597317_81600340_81600428_81604547_81604728_81606690_81606815_81608727_81608823_81613317_81613495_81622165_81622279_81629724_81629806_81636915
H1_mix_00038358	chr17	-	1601	1	FSM	ENSG00000204237.5	ENST00000575963.1	1600	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTTTTGGGGGTGGT	-31	True	NA	-1	True	AATAAA	-25	NA	81666635	81665034	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81665000_81666600
H1_mix_00038360	chr17	-	876	2	FSM	ENSG00000204237.5	ENST00000575992.1	821	2	0	-55	0	0	multi-exon	FALSE	canonical	3	107	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGAAGAATTAGTTACTGA	151	False	NA	-67	True	NA	NA	NA	81666537	81665100	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81665585_81666145
H1_mix_00038362	chr17	-	1099	5	NNC	ENSG00000214087.9	novel	1087	5	NA	NA	0	28	at_least_one_novel_splicesite	FALSE	non_canonical	1	179	junction_4	126.484188735193	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCCGAGTGTTCTGTAT	3278	False	NA	-4	True	AATAAA	-43	NA	81683781	81681158	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_81681880_81682033_81682150_81683012_81683127_81683535_81683594_81683691
H1_mix_00038363	chr17	-	1087	5	FSM	ENSG00000214087.9	ENST00000622299.5	1087	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	200.993003609578	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCAGACTGGATGAGCAG	-4	True	NA	-32	True	AATAAA	-15	NA	81683797	81681186	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81681880_81682033_81682150_81683012_81683127_81683535_81683595_81683692
H1_mix_00038366	chr17	-	931	6	FSM	ENSG00000225663.8	ENST00000457257.5	942	6	0	11	0	-11	multi-exon	FALSE	canonical	2	4	junction_5	395.26628998689	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCACAGCCAGCTCCCGGG	8746	False	NA	27	True	NA	NA	NA	81826394	81822371	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81822908_81823208_81823312_81823411_81823514_81824286_81824406_81824498_81824555_81826379
H1_mix_00038367	chr17	-	1271	5	FSM	ENSG00000225663.8	ENST00000455127.7	1282	5	0	11	0	-11	multi-exon	FALSE	canonical	3	609	junction_4	162.915622332544	4065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCACAGCCAGCTCCCGGG	-12	True	NA	27	True	NA	NA	NA	81833291	81822371	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81823312_81823411_81823514_81824286_81824406_81824498_81824555_81833237
H1_mix_00038368	chr17	-	2979	5	FSM	ENSG00000225663.8	ENST00000576730.5	2979	5	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_1	231.303912634439	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGCCTCTTGGTGGTCTG	8478	False	NA	-18	True	AATAAA	-16	NA	81826662	81822416	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81822908_81823208_81823312_81823411_81823514_81824286_81824406_81824498
H1_mix_00038369	chr17	-	1038	7	FSM	ENSG00000225663.8	ENST00000572645.5	1038	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	439.988636216891	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGCCTCTTGGTGGTCTG	11	True	NA	-18	True	AATAAA	-16	NA	81833268	81822416	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81822908_81823208_81823312_81823411_81823514_81824286_81824406_81824498_81824555_81826379_81826516_81833237
H1_mix_00038370	chr17	-	925	6	FSM	ENSG00000225663.8	ENST00000538396.5	925	6	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_1	227.57029683155	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGCCTCTTGGTGGTCTG	-12	True	NA	-18	True	AATAAA	-16	NA	81833291	81822416	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81822908_81823208_81823312_81823411_81823514_81824286_81824406_81824498_81824555_81833237
H1_mix_00038371	chr17	-	1245	3	FSM	ENSG00000225663.8	ENST00000576679.1	751	3	-59	-435	0	0	multi-exon	FALSE	canonical	3	998	junction_1	5.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGCACTGGGCGTGGCCT	8733	False	NA	-30	True	AATAAA	-4	NA	81824546	81822428	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81823312_81823411_81823514_81824286
H1_mix_00038372	chr17	-	1123	4	FSM	ENSG00000225663.8	ENST00000573478.5	1123	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	366.400812711374	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGCACTGGGCGTGGCCT	4533	False	NA	-30	True	AATAAA	-4	NA	81833302	81822428	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81823312_81824286_81824406_81824498_81824555_81833237
H1_mix_00038374	chr17	-	3582	2	FSM	ENSG00000185624.16	ENST00000474712.2	3562	2	0	-20	0	10	multi-exon	FALSE	canonical	3	2395	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTTTATGATCTCACCAAG	1	True	NA	7	True	AATAAA	-30	NA	81847047	81843148	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81846630_81846946
H1_mix_00038375	chr17	-	2454	11	FSM	ENSG00000185624.16	ENST00000331483.9	2437	11	0	-17	0	10	multi-exon	FALSE	canonical	3	2201	junction_4	144.163414221501	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTTTATGATCTCACCAAG	-1	True	NA	7	True	AATAAA	-30	NA	81860535	81843148	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
H1_mix_00038376	chr17	-	2388	11	FSM	ENSG00000185624.16	ENST00000680593.1	2371	11	0	-17	0	10	multi-exon	FALSE	canonical	3	62	junction_2	724.42876806488	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTTTATGATCTCACCAAG	-1	True	NA	7	True	AATAAA	-30	NA	81860535	81843148	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81844093_81845143_81845231_81845626_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
H1_mix_00038377	chr17	-	2616	10	FSM	ENSG00000185624.16	ENST00000680076.1	2596	10	0	-20	0	10	multi-exon	FALSE	canonical	3	2201	junction_3	131.469472586689	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTTTATGATCTCACCAAG	1	True	NA	7	True	AATAAA	-30	NA	81860569	81843148	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81844093_81845143_81845231_81845560_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
H1_mix_00038378	chr17	-	2301	10	FSM	ENSG00000185624.16	ENST00000679439.1	2280	10	0	-21	0	0	multi-exon	FALSE	canonical	1	6	junction_1	775.75282432257	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTACCACCTGTCCTT	9460	False	NA	-18	True	AATAAA	-5	NA	81860494	81843173	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81844093_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
H1_mix_00038379	chr17	-	2541	9	FSM	ENSG00000185624.16	ENST00000477607.7	2527	9	0	-14	0	0	multi-exon	FALSE	canonical	3	2201	junction_4	129.679412398422	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGCCAAATAAAGTTGAAAT	5420	False	NA	-34	True	NA	NA	NA	81856130	81843189	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452
H1_mix_00038380	chr17	-	2731	8	FSM	ENSG00000185624.16	ENST00000681614.1	2721	8	0	-10	0	0	multi-exon	FALSE	canonical	3	2201	junction_4	134.714361460364	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTGAACACATTGGCCAAA	5391	False	NA	-46	True	NA	NA	NA	81856159	81843201	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141
H1_mix_00038381	chr17	-	2977	9	FSM	ENSG00000185624.16	ENST00000681068.1	2977	9	0	0	0	0	multi-exon	FALSE	canonical	3	2201	junction_3	136.422081698675	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTGAACACATTGGCCAAA	9910	False	NA	-46	True	NA	NA	NA	81860044	81843201	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81844093_81845143_81845231_81845560_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180
H1_mix_00038382	chr17	-	2992	10	FSM	ENSG00000185624.16	ENST00000680838.1	2708	10	0	-284	0	0	multi-exon	FALSE	canonical	3	2201	junction_4	150.820553991069	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGACAGTTCTTCAGGCAT	9731	False	NA	-82	True	NA	NA	NA	81860223	81843237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180
H1_mix_00038383	chr17	-	2429	6	FSM	ENSG00000141522.12	ENST00000541078.6	1517	6	-288	-624	62	5	multi-exon	FALSE	canonical	3	28	junction_5	402.39880715529	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTGTCTGCTGCTTGGCTT	9724	False	NA	-13	True	AATAAA	-19	NA	81871262	81867715	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81869076_81869172_81869237_81869329_81869407_81869541_81869626_81869740_81869958_81870635
H1_mix_00038385	chr17	-	823	5	FSM	ENSG00000141522.12	ENST00000582984.5	823	5	0	0	0	0	multi-exon	FALSE	canonical	3	838	junction_4	95.0841732361385	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAGGCGGGCAGGGCAGA	12	True	NA	NA	False	NA	NA	NA	81871337	81868869	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81869076_81869172_81869237_81869329_81869626_81869740_81869958_81871297
H1_mix_00038387	chr17	-	2507	1	FSM	ENSG00000263731.1	ENST00000582866.1	2682	1	-204	379	-204	-379	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCTCATTTTAATTACAT	6646	False	NA	-63	True	AATAAA	-25	NA	81881310	81878803	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81878800_81881300
H1_mix_00038389	chr17	-	5089	13	FSM	ENSG00000185813.11	ENST00000538936.7	5089	13	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_7	25.675728919654	2875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGAGTCCTGTCTCTCTA	14	True	NA	1	True	AATAAA	-21	NA	81911399	81900957	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81904945_81905065_81905155_81905381_81905448_81905669_81905736_81906099_81906178_81906463_81906547_81906759_81906899_81907553_81907599_81907772_81907858_81908567_81908635_81908875_81909038_81909513_81909603_81911266
H1_mix_00038390	chr17	-	1765	14	FSM	ENSG00000185813.11	ENST00000538721.6	1765	14	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_8	143.610131336495	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTTCCTTCCCGGCAGC	7	True	NA	-39	True	AAAACA	-4	NA	81911406	81904342	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81904945_81905065_81905155_81905381_81905448_81905669_81905736_81906099_81906178_81906463_81906547_81906759_81906899_81907203_81907258_81907553_81907599_81907772_81907858_81908567_81908635_81908875_81909038_81909513_81909603_81911266
H1_mix_00038391	chr17	-	1652	12	FSM	ENSG00000185813.11	ENST00000571105.5	1628	12	0	-24	0	0	multi-exon	FALSE	canonical	3	11	junction_2	117.431956735847	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTTCCTTCCCGGCAGC	0	True	NA	-39	True	AAAACA	-4	NA	81911413	81904342	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81904945_81905065_81905155_81905669_81905736_81906099_81906178_81906463_81906547_81906759_81906899_81907553_81907599_81907772_81907858_81908567_81908635_81908875_81909038_81909513_81909603_81911266
H1_mix_00038392	chr17	-	1474	13	FSM	ENSG00000185813.11	ENST00000570388.5	1474	13	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_11	109.877456994397	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCCCCCTGCTCTGCTTC	0	True	NA	NA	False	NA	NA	NA	81911354	81904811	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81904945_81905065_81905155_81905381_81905448_81905669_81905736_81906099_81906178_81906463_81906547_81906759_81906899_81907553_81907599_81907772_81907858_81908567_81908635_81908875_81909322_81909513_81909603_81911266
H1_mix_00038393	chr17	-	572	3	FSM	ENSG00000185813.11	ENST00000574155.1	572	3	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_1	29	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACTTCAAGGTGAGGCTC	8609	False	NA	NA	False	NA	NA	NA	81906829	81905680	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81905736_81906099_81906547_81906759
H1_mix_00038395	chr17	-	920	6	FSM	ENSG00000187531.14	ENST00000574495.6	920	6	0	0	0	0	multi-exon	FALSE	canonical	1	26	junction_4	28.4225262775848	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGTGCCGATGACACAAT	4	True	NA	NA	False	NA	NA	NA	81918162	81914293	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81914703_81915439_81915513_81915610_81915682_81917614_81917720_81917829_81917968_81918038
H1_mix_00038397	chr17	-	5061	3	FSM	ENSG00000197063.11	ENST00000357736.9	5061	3	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_1	2	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCAGGTGCTTCTTTGGG	-11	True	NA	-1	True	AATAAA	-14	NA	81927735	81918269	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81923058_81923149_81923215_81927527
H1_mix_00038398	chr17	-	1895	8	FSM	ENSG00000183010.17	ENST00000337943.9	1890	8	0	-5	0	5	multi-exon	FALSE	canonical	3	36	junction_1	467.469741463203	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATTCAAATGTTAGTCTC	-10	True	NA	-7	True	ATTAAA	-30	NA	81937257	81932378	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81932964_81933306_81933377_81934325_81934490_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747
H1_mix_00038399	chr17	-	2278	7	FSM	ENSG00000183010.17	ENST00000329875.13	2269	7	0	-9	0	2	multi-exon	FALSE	canonical	3	1176	junction_2	129.815253341046	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACAGATTCAAATGTTAGT	5	True	NA	-10	True	ATTAAA	-27	NA	81937300	81932381	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81933377_81934325_81934490_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747
H1_mix_00038401	chr17	-	1745	7	FSM	ENSG00000183010.17	ENST00000629768.2	1740	7	0	-5	0	5	multi-exon	FALSE	canonical	3	197	junction_1	513.589221936061	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATTCAAATGTTAGTCTC	-23	True	NA	-7	True	ATTAAA	-30	NA	81937328	81932378	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81933377_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81937261
H1_mix_00038402	chr17	-	1816	7	FSM	ENSG00000183010.17	ENST00000403172.8	1811	7	0	-5	0	5	multi-exon	FALSE	canonical	3	42	junction_2	548.259797500743	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATTCAAATGTTAGTCTC	-23	True	NA	-7	True	ATTAAA	-30	NA	81937328	81932378	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81933377_81934325_81934490_81934925_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81937261
H1_mix_00038403	chr17	-	1862	8	NIC	ENSG00000183010.17	novel	1904	8	NA	NA	6	-1	intron_retention	FALSE	canonical	3	82	junction_7	451.933126712801	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCAAAAGTCTACAGATTC	15	True	NA	-20	True	ATTAAA	-17	NA	81937290	81932391	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_81933377_81934325_81934490_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81937257
H1_mix_00038406	chr17	-	1360	8	FSM	ENSG00000183010.17	ENST00000402252.6	1346	8	0	-14	0	0	multi-exon	FALSE	canonical	3	37	junction_7	467.131585709366	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCCTACTCCAGTATCAG	8	True	NA	NA	False	NA	NA	NA	81937239	81932920	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81933377_81934325_81934490_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81937179
H1_mix_00038409	chr17	-	684	4	FSM	ENSG00000169689.15	ENST00000579520.5	702	4	18	0	18	0	multi-exon	FALSE	canonical	1	1	junction_3	742.841840501732	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTTCTTGCCATTAA	NA	False	NA	-18	True	AATAAA	-20	NA	82024089	82018701	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82019220_82019292_82019382_82019857_82019910_82024064
H1_mix_00038410	chr17	-	730	5	FSM	ENSG00000169689.15	ENST00000584600.5	730	5	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_1	540.299454006757	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGCTTTCTTGCCATTA	23	False	NA	-19	True	AATAAA	-19	NA	82022858	82018702	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82019220_82019307_82019382_82019640_82019695_82019857_82019910_82022825
H1_mix_00038412	chr17	-	710	4	FSM	ENSG00000169689.15	ENST00000580435.5	710	4	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_1	624.174299018756	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGCTTTCTTGCCATTA	-11	True	NA	-19	True	AATAAA	-19	NA	82022892	82018702	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82019220_82019307_82019382_82019857_82019910_82022825
H1_mix_00038413	chr17	-	746	4	FSM	ENSG00000169689.15	ENST00000306704.10	751	4	5	0	5	0	multi-exon	FALSE	canonical	3	1147	junction_2	301.164775865675	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGCTTTCTTGCCATTA	NA	False	NA	-19	True	AATAAA	-19	NA	82022913	82018702	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82019220_82019292_82019382_82019857_82019910_82022825
H1_mix_00038414	chr17	-	882	5	FSM	ENSG00000169689.15	ENST00000584514.5	882	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_4	614.020917803294	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCTCTCCCAGCTTGGC	7	True	NA	-32	True	AATAAA	-6	NA	82022821	82018715	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82019220_82019292_82019382_82019640_82019695_82019857_82019910_82022638
H1_mix_00038415	chr17	-	799	5	FSM	ENSG00000169689.15	ENST00000584347.1	799	5	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_2	687.711921882993	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTCCAGCCATGCGATAT	2	True	NA	-117	True	NA	NA	NA	82022879	82018800	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82019220_82019292_82019382_82019509_82019695_82019857_82019910_82022825
H1_mix_00038417	chr17	-	758	4	FSM	ENSG00000169689.15	ENST00000580090.5	752	4	0	-6	0	0	multi-exon	FALSE	canonical	3	70	junction_3	712.562979672674	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTCCTGCCACCCGACA	8	True	NA	-154	True	NA	NA	NA	82022873	82018837	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82019220_82019292_82019382_82019857_82019910_82022638
H1_mix_00038422	chr17	-	852	8	FSM	ENSG00000169738.8	ENST00000306869.7	852	8	0	0	0	0	multi-exon	FALSE	canonical	3	798	junction_7	128.55015697051	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCAGGTAGCTGGGGGCT	-2	True	NA	18	True	AATAAA	-41	NA	82037697	82035857	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82036064_82036190_82036309_82036383_82036449_82036543_82036644_82036720_82036764_82036858_82037014_82037449_82037548_82037630
H1_mix_00038426	chr17	-	1755	4	FSM	ENSG00000169733.12	ENST00000580793.5	1755	4	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_3	29.0631496343164	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGCTCCTGTCTTAGTCA	9475	False	NA	-1	True	AGTAAA	-19	NA	82050514	82047901	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82048808_82049030_82049117_82049676_82049843_82049917
H1_mix_00038428	chr17	-	2082	6	FSM	ENSG00000169733.12	ENST00000580953.5	2082	6	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_4	43.412440613262	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACGTGGCTCCTGTCTTA	8427	False	NA	-5	True	AGTAAA	-15	NA	82051562	82047905	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82048808_82049030_82049117_82049676_82050556_82050661_82050765_82051293_82051343_82051499
H1_mix_00038429	chr17	-	994	7	FSM	ENSG00000169733.12	ENST00000429557.7	994	7	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_6	38.8776571081929	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGTGATGGGTGTTTTGGG	8555	False	NA	NA	False	NA	NA	NA	82051434	82048552	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82048808_82049030_82049117_82049676_82049843_82049917_82050007_82050401_82050556_82050661_82050765_82051293
H1_mix_00038430	chr17	-	994	3	FSM	ENSG00000169733.12	ENST00000584515.1	994	3	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	8	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGCTGCCCGGGCTGGGA	8403	False	NA	NA	False	NA	NA	NA	82051586	82049906	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82050765_82051293_82051343_82051499
H1_mix_00038433	chr17	-	2517	13	FSM	ENSG00000169718.18	ENST00000354321.11	2151	13	0	-366	0	0	multi-exon	FALSE	canonical	1	150	junction_5	134.301976282307	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGCCTGCACGGCAGGAA	258	False	NA	NA	False	NA	NA	NA	82065545	82057505	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82058255_82058340_82058417_82058780_82058819_82059947_82060094_82060700_82060784_82060864_82060962_82061208_82061354_82061617_82061722_82061900_82061984_82062860_82062974_82063467_82063519_82064125_82064235_82064822
H1_mix_00038434	chr17	-	1834	14	NIC	ENSG00000169718.18	novel	2233	14	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	1	112	junction_2	161.384945368879	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCACAGCCTGTGACCACT	21	False	NA	-6	True	AATAAA	-20	NA	82065782	82057874	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_82058255_82058340_82058409_82058780_82058819_82059947_82060094_82060700_82060784_82060864_82060962_82061208_82061354_82061617_82061722_82061900_82061984_82062860_82062974_82063467_82063519_82064125_82064235_82064822_82065070_82065612
H1_mix_00038435	chr17	-	1049	4	FSM	ENSG00000169718.18	ENST00000542088.2	1040	4	0	-9	0	0	multi-exon	FALSE	canonical	3	416	junction_2	119.736748280922	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAACAATAAATCATTTCAA	5028	False	NA	-36	True	NA	NA	NA	82060775	82057904	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82058255_82058340_82058819_82059947_82060094_82060700
H1_mix_00038440	chr17	-	857	2	FSM	ENSG00000169710.9	ENST00000584610.2	857	2	0	0	0	0	multi-exon	FALSE	canonical	3	1600	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTAGGCATGTCCCACCC	9756	False	NA	NA	False	NA	NA	NA	82079929	82078996	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82079281_82079356
H1_mix_00038441	chr17	-	627	4	FSM	ENSG00000169710.9	ENST00000635197.1	627	4	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_3	254.716836245009	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTGGGTCCTGCCCAGCC	8227	False	NA	NA	False	NA	NA	NA	82098294	82093600	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82093772_82095319_82095473_82096318_82096448_82098120
H1_mix_00038443	chr17	-	3594	18	NIC	ENSG00000176155.20	novel	3488	20	NA	NA	-93	0	intron_retention	FALSE	canonical	3	18	junction_5	7.37666760221001	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGCTTGGCCTTAGCGT	4822	False	NA	-15	True	ATTAAA	-20	NA	82212923	82101469	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_82101867_82127691_82127909_82128492_82128598_82134072_82134195_82151559_82151774_82157747_82157949_82163199_82163358_82171700_82171854_82172637_82172861_82178473_82178606_82179026_82179190_82183773_82183933_82188218_82188420_82193755_82194140_82195262_82195365_82198313_82198423_82201537_82201953_82212784
H1_mix_00038444	chr17	-	2112	5	ISM	ENSG00000176155.20	ENST00000665763.1	3488	20	59989	-53	-531	0	3prime_fragment	FALSE	canonical	3	32	junction_2	4.9749371855331	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGCTTGGCCTTAGCGT	NA	False	NA	-15	True	ATTAAA	-20	NA	82152830	82101469	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_82101867_82127691_82127909_82128492_82128598_82134072_82134195_82151559
H1_mix_00038446	chr17	-	791	4	FSM	ENSG00000176155.20	ENST00000578910.1	796	4	6	-1	0	0	multi-exon	FALSE	canonical	3	25	junction_1	4.54606056566195	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCAGTGAGCGTGTGCTTG	7874	False	NA	NA	False	NA	NA	NA	82198422	82188223	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82188420_82193755_82194140_82195262_82195365_82198313
H1_mix_00038447	chr17	-	491	5	FSM	ENSG00000176155.20	ENST00000581625.2	491	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	11.7765657133139	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGCTGCAGGAGCTGCA	7874	False	NA	NA	False	NA	NA	NA	82198422	82188349	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82188420_82193755_82193831_82193981_82194140_82195262_82195365_82198336
H1_mix_00038449	chr17	-	1580	9	FSM	ENSG00000141551.15	ENST00000398519.9	1580	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	117.513762491889	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTCCCATCTAACCACCA	5	True	NA	-19	True	AATAAA	-17	NA	82273428	82239726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82240063_82248874_82249015_82249430_82249603_82251378_82251528_82252433_82252605_82253015_82253245_82255428_82255578_82265685_82265797_82273305
H1_mix_00038450	chr17	-	3699	9	FSM	ENSG00000141551.15	ENST00000314028.11	3681	9	-18	0	-18	0	multi-exon	FALSE	canonical	3	189	junction_1	70.0204211284108	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCTCCCCTTTCCATGT	-17	True	NA	-15	True	AATAAA	-22	NA	82273718	82242666	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82244832_82248874_82249015_82249430_82249603_82251378_82251528_82252433_82252605_82253015_82253245_82255428_82255578_82265685_82265797_82273305
H1_mix_00038451	chr17	-	928	3	FSM	ENSG00000141551.15	ENST00000577578.5	928	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	105.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTTTTATTGTTTCT	5949	False	NA	17	True	AAGAAA	-2	NA	82246591	82244361	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82244832_82245975_82246040_82246197
H1_mix_00038452	chr17	-	2047	10	FSM	ENSG00000141551.15	ENST00000392334.6	2047	10	0	0	0	0	multi-exon	TRUE	canonical	3	181	junction_2	80.6603915526828	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTTTTATTGTTTCT	4	True	NA	17	True	AAGAAA	-2	NA	82273697	82244361	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82244832_82245975_82246040_82248874_82249015_82249430_82249603_82251378_82251528_82252433_82252605_82253015_82253245_82255428_82255578_82265685_82265797_82273305
H1_mix_00038457	chr17	-	4770	1	FSM	ENSG00000181396.13	ENST00000578586.1	3796	1	-68	-906	-68	0	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGCTGTCGGGAAGGGA	NA	False	NA	-14	True	AATAAA	-17	NA	82393979	82389209	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82389200_82394000
H1_mix_00038459	chr17	-	4456	10	FSM	ENSG00000181396.13	ENST00000329197.9	1652	10	0	-2804	0	4	multi-exon	FALSE	canonical	2	15	junction_1	32.8727437849447	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCGGGAAGGGAGATG	11	True	NA	-10	True	AATAAA	-21	NA	82418576	82389205	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82392535_82394330_82394544_82398195_82398320_82403936_82404091_82405323_82405381_82406417_82406483_82409367_82409411_82411454_82411531_82415397_82415628_82418411
H1_mix_00038460	chr17	-	385	3	FSM	ENSG00000181396.13	ENST00000582593.1	385	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	54	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTATTACGATCTTC	NA	False	NA	NA	False	GATAAA	-14	NA	82403967	82396596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82396827_82398195_82398320_82403936
H1_mix_00038461	chr17	-	2073	7	FSM	ENSG00000178927.18	ENST00000306645.10	2073	7	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_6	46.4925322557887	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGGTCTCCCTGTGCTGCT	-15	True	NA	-5	True	NA	NA	NA	82450752	82442585	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82444125_82444446_82444592_82445863_82445961_82446622_82446697_82447579_82447622_82449169_82449293_82450699
H1_mix_00038463	chr17	-	4327	5	FSM	ENSG00000178927.18	ENST00000585044.5	4327	5	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_4	23.123310749112	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCAGCTTCCACTCTTT	8658	False	NA	-6	True	CATAAA	-17	NA	82450109	82442643	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82444125_82444446_82444592_82445863_82445961_82446622_82446697_82447579
H1_mix_00038465	chr17	-	2044	6	FSM	ENSG00000178927.18	ENST00000434650.6	2050	6	6	0	6	0	multi-exon	FALSE	canonical	3	19	junction_4	108.811028852778	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCAGCTTCCACTCTTT	7944	False	NA	-6	True	CATAAA	-17	NA	82450823	82442643	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82444125_82444446_82444592_82445863_82445961_82446622_82446697_82449169_82449293_82450699
H1_mix_00038474	chr17	-	2336	10	FSM	ENSG00000141580.16	ENST00000572583.5	2322	10	0	-14	0	0	multi-exon	FALSE	canonical	3	40	junction_4	176.934248790509	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAAGTAGAATTGTGTGT	121	False	NA	-4	True	AATAAA	-34	NA	82648318	82614561	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82616026_82616523_82616646_82617295_82617398_82619042_82619095_82621608_82621800_82625388_82625484_82627203_82627292_82630920_82631023_82643948_82644024_82648273
H1_mix_00038477	chr17	-	3734	6	FSM	ENSG00000141542.11	ENST00000571995.6	3829	6	36	59	0	5	multi-exon	FALSE	canonical	3	25	junction_5	4.17612260356422	191	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGACTGTGTGTTTGGGT	21	True	NA	NA	False	AATACA	-14	NA	82698662	82655031	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82658135_82658490_82658714_82659579_82659658_82660986_82661048_82664495_82664557_82698454
H1_mix_00038479	chr17	-	1383	13	FSM	ENSG00000175711.9	ENST00000320865.4	2985	13	-40	1642	-1	0	multi-exon	TRUE	canonical	3	39	junction_5	7.70777024970401	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAACCCAAGGCTCTTTTA	-19	True	NA	-5	True	AATAAA	-21	NA	83051810	82943790	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82944050_82946878_82946984_82956694_82956770_82957180_82957250_82957358_82957495_82961056_82961182_82965650_82965747_83005114_83005211_83014453_83014520_83035034_83035100_83048470_83048571_83048668_83048786_83051736
H1_mix_00038480	chr17	+	295	1	Intergenic	novelGene_537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAGTTTACTTCTTTAGG	NA	False	NA	NA	False	NA	NA	NA	2755028	2755323	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_2755000_2755300
H1_mix_00038481	chr17	+	432	1	Intergenic	novelGene_543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	890	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTAAACACACCCACGGCC	NA	False	NA	NA	False	NA	NA	NA	22521207	22521639	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_22521200_22521600
H1_mix_00038482	chr17	+	269	1	Intergenic	novelGene_544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTGACAGAGCGAGACTC	NA	False	NA	NA	False	NA	NA	NA	29783770	29784039	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_29783800_29784000
H1_mix_00038483	chr17	+	240	1	Intergenic	novelGene_545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGTGATCCACCAGCCTA	NA	False	NA	NA	False	NA	NA	NA	30780970	30781210	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_30781000_30781200
H1_mix_00038484	chr17	+	283	1	ISM	ENSG00000266865.7	ENST00000687724.1	2343	6	25692	1101	9930	262	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCACAGTGCAACAAGCTAG	NA	False	NA	NA	False	NA	NA	NA	31034270	31034553	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_31034300_31034600
H1_mix_00038485	chr17	+	432	1	Intergenic	novelGene_548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	300	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCGATAAACCATTTGTT	9226	False	NA	NA	False	CATAAA	-41	NA	31347045	31347477	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_31347000_31347500
H1_mix_00038486	chr17	+	286	1	Intergenic	novelGene_549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAAAAAAAAAGCAAG	NA	False	NA	NA	False	NA	NA	NA	31936285	31936571	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_31936300_31936600
H1_mix_00038487	chr17	+	1575	1	Intergenic	novelGene_550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTTAAGGTACTCAATCA	NA	False	NA	NA	False	ACTAAA	-39	NA	33712659	33714234	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_33712700_33714200
H1_mix_00038488	chr17	+	284	1	Intergenic	novelGene_555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3777	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGCATTCCTTTCTAAGG	8188	False	NA	NA	False	NA	NA	NA	37454308	37454592	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_37454300_37454600
H1_mix_00038489	chr17	+	212	1	Intergenic	novelGene_559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTTTTGTGGTGGAATG	NA	False	NA	NA	False	NA	NA	NA	40011771	40011983	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_40011800_40012000
H1_mix_00038490	chr17	+	204	1	Intergenic	novelGene_561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTCAGACTCTTAATCAA	8245	False	NA	NA	False	NA	NA	NA	43024257	43024461	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_43024300_43024500
H1_mix_00038491	chr17	+	1025	1	Intergenic	novelGene_563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TATAAAAATAAAAAAAAATA	NA	False	NA	NA	False	AATAAA	-5	NA	43345793	43346818	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_43345800_43346800
H1_mix_00038493	chr17	+	699	1	Intergenic	novelGene_565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGGATAGTGTAAACTCT	NA	False	NA	NA	False	NA	NA	NA	49423343	49424042	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_49423300_49424000
H1_mix_00038494	chr17	+	560	1	Intergenic	novelGene_566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTGATTTCAGGCCTTT	NA	False	NA	NA	False	AATACA	-13	NA	49536830	49537390	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_49536800_49537400
H1_mix_00038495	chr17	+	285	1	Intergenic	novelGene_567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTCGTTTTTTAAGTTG	NA	False	NA	NA	False	NA	NA	NA	49569730	49570015	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_49569700_49570000
H1_mix_00038496	chr17	+	309	1	Intergenic	novelGene_568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTAGGCATCTGTACAT	NA	False	NA	NA	False	AATGAA	-38	NA	49861892	49862201	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_49861900_49862200
H1_mix_00038497	chr17	+	250	1	Intergenic	novelGene_570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCATATACGTGCAAGTCAC	NA	False	NA	NA	False	NA	NA	NA	53455813	53456063	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_53455800_53456100
H1_mix_00038499	chr17	+	5658	1	Intergenic	novelGene_573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGAAATGAGAAATGAGGG	NA	False	NA	NA	False	AGTAAA	-24	NA	62043437	62049095	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_62043400_62049100
H1_mix_00038500	chr17	+	394	1	Intergenic	novelGene_574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGTCTCCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62049529	62049923	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_62049500_62049900
H1_mix_00038501	chr17	+	1573	1	Intergenic	novelGene_575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	62056962	62058535	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_62057000_62058500
H1_mix_00038503	chr17	+	637	1	Intergenic	novelGene_577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTGGTTACTACGTTCCA	NA	False	NA	NA	False	NA	NA	NA	69321750	69322387	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_69321800_69322400
H1_mix_00038504	chr17	+	295	1	Intergenic	novelGene_579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCGCACACAGTGGTG	636	False	NA	NA	False	NA	NA	NA	75110678	75110973	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_75110700_75111000
H1_mix_00038505	chr17	+	1846	1	FSM	ENSG00000231784.8	ENST00000536214.1	2677	1	351	480	127	-32	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGCAGAAAGTAACAGTAAAA	655	False	NA	NA	False	AGTAAA	-20	NA	753010	754856	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_753000_754900
H1_mix_00038506	chr17	+	1034	4	NNC	ENSG00000171861.11	novel	1729	4	NA	NA	-43	1296	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_3	86.8600406784769	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCCTAAAATGTCTCTTACA	155	False	NA	NA	False	NA	NA	NA	782556	789494	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_782693_783082_783328_787964_788133_789009
H1_mix_00038507	chr17	+	1125	2	NNC	ENSG00000171861.11	novel	770	2	NA	NA	-43	557	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_1	0	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTCCTTCATTTGGCT	155	False	NA	20	True	AATAAA	-20	NA	782556	784074	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_782693_783085
H1_mix_00038508	chr17	+	314	1	FSM	ENSG00000277491.1	ENST00000612517.1	489	1	-127	302	-127	-302	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACAGACCTCTGGGGAC	NA	False	NA	NA	False	NA	NA	NA	795178	795492	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_795200_795500
H1_mix_00038509	chr17	+	364	1	FSM	ENSG00000277597.1	ENST00000615078.1	426	1	-20	82	-20	-82	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGATGGGCTCCCGGCGT	237	False	NA	-79	True	NA	NA	NA	1684705	1685069	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_1684700_1685100
H1_mix_00038510	chr17	+	3807	11	FSM	ENSG00000167716.19	ENST00000309182.9	3808	11	-3	4	-3	1	multi-exon	TRUE	canonical	1	1	junction_1	13.7291660343955	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGCTTGTCTTTTTTTTT	0	True	NA	16	True	AATAAA	-27	NA	1716532	1738595	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_1716634_1727989_1728627_1730379_1730488_1730754_1730946_1731067_1731259_1732324_1732491_1732665_1732832_1733526_1734217_1735571_1735718_1736038_1736219_1737364
H1_mix_00038513	chr17	+	598	1	Intergenic	novelGene_535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCCACTATTAAGGTCT	NA	False	NA	NA	False	NA	NA	NA	1857267	1857865	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_1857300_1857900
H1_mix_00038518	chr17	+	2496	13	NIC	ENSG00000108963.19	novel	2662	13	NA	NA	0	-473	intron_retention	FALSE	canonical	3	98	junction_5	48.1386885294285	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAGCATCTTTTTCCTG	39	False	NA	10	True	AATAAA	-14	NA	2030185	2043425	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_2030231_2033504_2033658_2033778_2033843_2035969_2036092_2036528_2036687_2036834_2036957_2039754_2039824_2040217_2040375_2040504_2040606_2041102_2041182_2041480_2041622_2041767_2042232_2042604
H1_mix_00038522	chr17	+	955	1	FSM	ENSG00000262333.1	ENST00000575692.1	955	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATTAGGCAACAAAGCTTA	2797	False	NA	NA	False	NA	NA	NA	2306760	2307715	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_2306800_2307700
H1_mix_00038529	chr17	+	5771	4	FSM	ENSG00000007168.14	ENST00000571495.2	6122	4	351	0	338	0	multi-exon	FALSE	canonical	3	565	junction_3	24.6891789161883	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAACTAGATGTGATTTT	1036	False	NA	4	True	ATTAAA	-39	NA	2672654	2685606	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_2674289_2676504_2676607_2680163_2680321_2681728
H1_mix_00038532	chr17	+	279	1	FSM	ENSG00000239884.3	ENST00000492377.3	279	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAGAAGAAAAAGGAT	9339	False	NA	NA	False	NA	NA	NA	2680957	2681236	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_2681000_2681200
H1_mix_00038535	chr17	+	2418	10	FSM	ENSG00000040531.16	ENST00000673669.1	2417	10	-1	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	22.7373625190124	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTAAAACCTACTCGCTT	1	True	NA	-8	True	NA	NA	NA	3636724	3661512	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_3636832_3637106_3637317_3647443_3647523_3654997_3655102_3655220_3655353_3656486_3656587_3656675_3656796_3658004_3658176_3659857_3659976_3660235
H1_mix_00038537	chr17	+	925	1	FSM	ENSG00000240898.1	ENST00000486753.1	483	1	-379	-63	-379	63	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGGAGAGGAAGGGCTTG	NA	False	NA	NA	False	AATAAA	-39	NA	3664840	3665765	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_3664800_3665800
H1_mix_00038538	chr17	+	846	6	FSM	ENSG00000183018.9	ENST00000571386.1	846	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3.286335345031	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAACGAAGGGCCAGGGG	NA	False	NA	NA	False	NA	NA	NA	4533031	4537798	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4533130_4533242_4533433_4533787_4533854_4536075_4536175_4536899_4536947_4537452
H1_mix_00038540	chr17	+	1773	14	FSM	ENSG00000141480.18	ENST00000346341.6	1769	14	-4	0	0	0	multi-exon	FALSE	canonical	2	18	junction_3	161.873571822079	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGTGTTTTCTCTGTAG	-35	True	NA	21	True	AATAAA	-17	NA	4710629	4721499	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4710745_4715012_4715044_4715972_4716034_4716411_4716609_4717216_4717277_4717684_4717753_4717887_4718024_4718260_4718346_4718611_4718685_4719282_4719421_4720215_4720300_4720392_4720473_4720549_4720641_4720945
H1_mix_00038541	chr17	+	1766	15	NNC	ENSG00000141480.18	novel	1778	15	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_9	127.512244310025	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGTGTGTGTTTTCTCTG	-15	True	NA	18	True	AATAAA	-14	NA	4710649	4721496	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_4710745_4715012_4715044_4715972_4716034_4716146_4716192_4716411_4716609_4717216_4717277_4717684_4717753_4717887_4718024_4718260_4718353_4718611_4718685_4719282_4719421_4720215_4720300_4720392_4720473_4720585_4720641_4720945
H1_mix_00038543	chr17	+	1755	14	NIC	ENSG00000141480.18	novel	1778	15	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_12	138.672190187366	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGTGTGTTTTCTCTGT	-5	True	NA	19	True	AATAAA	-15	NA	4710659	4721497	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_4710745_4715972_4716034_4716146_4716192_4716411_4716609_4717216_4717277_4717684_4717753_4717887_4718024_4718260_4718346_4718611_4718685_4719282_4719421_4720215_4720300_4720392_4720473_4720549_4720641_4720945
H1_mix_00038551	chr17	+	2118	2	FSM	ENSG00000161920.11	ENST00000573708.1	802	2	-4	-1312	-1	137	multi-exon	FALSE	canonical	3	170	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTGAGGTGGGGGAGGA	1	True	NA	NA	False	NA	NA	NA	4731426	4733745	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4731575_4731775
H1_mix_00038552	chr17	+	1204	4	FSM	ENSG00000182327.8	ENST00000331264.8	1217	4	0	13	0	-13	multi-exon	FALSE	canonical	3	9	junction_3	1.24721912892465	237	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACGAAGGTGAGAAGATG	11	True	NA	-3	True	NA	NA	NA	4788963	4790576	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4789118_4789225_4789291_4789510_4789678_4789758
H1_mix_00038559	chr17	+	621	3	FSM	ENSG00000141503.17	ENST00000575511.1	621	3	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	12.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACCGTGGGGGACATGGA	224	False	NA	NA	False	NA	NA	NA	4894857	4895789	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4895243_4895349_4895494_4895697
H1_mix_00038566	chr17	+	2214	8	ISM	ENSG00000108515.18	ENST00000323997.10	1521	12	-250	560	-235	-547	intron_retention	FALSE	canonical	1	41	junction_1	47.1303013582817	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCAAACTGGCTCAGTCT	288	False	NA	NA	False	NA	NA	NA	4950844	4956571	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_4951225_4951827_4951915_4952794_4952891_4953050_4953110_4953271_4953342_4953711_4953846_4955074_4955298_4955406
H1_mix_00038567	chr17	+	4348	24	NIC	ENSG00000129250.12	novel	7917	23	NA	NA	-95	2438	combination_of_known_junctions	TRUE	canonical	3	44	junction_2	92.722343004529	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGGCCTGTTTGTTTT	129	False	NA	26	True	AATAAA	-17	NA	4997854	5024703	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_4998157_4999012_4999047_4999849_4999971_5000219_5000353_5000771_5000849_5001221_5001402_5002058_5002125_5002463_5002643_5002730_5002843_5003611_5003690_5003850_5003917_5003997_5004074_5004566_5004646_5004854_5005001_5006914_5007085_5007262_5007343_5007466_5007543_5013652_5013733_5014742_5014838_5019995_5020080_5020491_5020679_5020805_5020879_5022091_5022710_5023467
H1_mix_00038568	chr17	+	951	5	NIC	ENSG00000029725.17	novel	2490	17	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	28	junction_4	124.398553046247	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTCTTTGCTTCCTCCCT	-10	True	NA	4	True	AATAAA	-17	NA	5282264	5336688	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_5282521_5308693_5308823_5331948_5332153_5335183_5335345_5336487
H1_mix_00038569	chr17	+	1688	6	FSM	ENSG00000129197.15	ENST00000571613.5	1688	6	0	0	0	0	multi-exon	FALSE	canonical	3	385	junction_4	189.100396615131	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	151	False	NA	4	True	AATAAA	-15	NA	5419640	5432876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5426300_5428070_5428212_5432541
H1_mix_00038571	chr17	+	3077	3	ISM	ENSG00000167842.16	ENST00000576570.5	945	4	542	-1802	0	0	3prime_fragment	FALSE	canonical	2	7	junction_1	52	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTACATGAAATATGTT	14	False	NA	-46	True	AATGAA	-24	NA	5486926	5490737	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_5487695_5488195_5488590_5488822
H1_mix_00038572	chr17	+	2505	3	FSM	ENSG00000167842.16	ENST00000381165.3	2505	3	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	54	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTTTTATTTTCTGC	14	False	NA	31	True	ATTAAA	-19	NA	5486926	5490814	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_5487046_5488195_5488590_5488822
H1_mix_00038573	chr17	+	1963	1	FSM	ENSG00000256806.6	ENST00000542475.3	1715	1	-99	-149	-99	149	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTTTGAATGTTCAAGGA	-1	True	NA	NA	False	AATACA	-17	NA	6651662	6653625	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_6651700_6653600
H1_mix_00038574	chr17	+	543	5	FSM	ENSG00000262943.8	ENST00000576636.6	574	5	31	0	18	0	multi-exon	FALSE	canonical	1	2	junction_3	7.36121593216773	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGGCCATTAAGGGGAC	36	False	NA	NA	False	NA	NA	NA	6853960	6895102	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_6854061_6854213_6854454_6892002_6892076_6894883_6895007_6895095
H1_mix_00038575	chr17	+	1010	3	FSM	ENSG00000108839.12	ENST00000406228.1	1023	3	13	0	13	0	multi-exon	FALSE	canonical	3	8	junction_1	0.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATGAATGTTACATCACA	NA	False	NA	3	True	AATAAA	-17	NA	7009501	7010736	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7009848_7009955_7010127_7010243
H1_mix_00038576	chr17	+	1509	2	FSM	ENSG00000219200.12	ENST00000552176.2	1485	2	-24	0	0	0	multi-exon	FALSE	canonical	3	1662	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGTCTGTGCTTGAG	-15	True	NA	31	True	AATAAA	-19	NA	7012621	7014532	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7013743_7014144
H1_mix_00038578	chr17	+	978	7	NNC	ENSG00000258315.5	novel	996	6	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	292.737083404204	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGCTGTCTGCTTAACATT	-2	True	NA	34	True	AATAAA	-18	NA	7014754	7017524	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_7014879_7015061_7015157_7015366_7015460_7015773_7015876_7016494_7016686_7016909_7017015_7017256
H1_mix_00038580	chr17	+	779	5	FSM	ENSG00000258315.5	ENST00000552775.1	779	5	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_4	171.80566783433	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCGTGCTGTCTGCTTAA	-19	True	NA	30	True	AATAAA	-14	NA	7015039	7017520	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7015157_7015773_7015876_7016494_7016686_7016909_7017015_7017256
H1_mix_00038582	chr17	+	2205	19	FSM	ENSG00000072778.20	ENST00000350303.9	2191	19	-14	0	5	0	multi-exon	FALSE	canonical	2	34	junction_2	232.920560823473	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTTTGCTCCTGTGTGA	2739	False	NA	13	True	AATAAA	-15	NA	7219848	7225264	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7220047_7220121_7220198_7220603_7220677_7220765_7220831_7220923_7221059_7221537_7221683_7221951_7222082_7222176_7222303_7222666_7222866_7223132_7223238_7223643_7223731_7223812_7223876_7223967_7224070_7224145_7224244_7224320_7224394_7224479_7224553_7224641_7224715_7224808_7224885_7224956
H1_mix_00038583	chr17	+	735	2	FSM	ENSG00000072778.20	ENST00000578269.5	724	2	-11	0	4	0	multi-exon	FALSE	canonical	3	782	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGGGAAGGGATAATCAG	-5	True	NA	NA	False	NA	NA	NA	7219866	7220676	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7220047_7220121
H1_mix_00038584	chr17	+	755	5	FSM	ENSG00000072778.20	ENST00000582056.5	738	5	-17	0	0	0	multi-exon	FALSE	canonical	3	782	junction_1	34.662660024874	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTAGGGCTAAGGTCTCTT	6	True	NA	NA	False	NA	NA	NA	7219877	7221136	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7220047_7220121_7220198_7220463_7220530_7220603_7220677_7220765
H1_mix_00038585	chr17	+	2425	19	NIC	ENSG00000072778.20	novel	2184	20	NA	NA	2	-1	intron_retention	FALSE	canonical	2	452	junction_8	117.159382840873	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTCTCAAGAGCACTTAC	-13	True	NA	-39	True	NA	NA	NA	7219909	7225212	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_7220047_7220121_7220198_7220463_7220530_7220603_7220677_7220765_7220831_7220923_7221059_7221537_7221683_7221951_7222082_7222176_7222303_7222666_7223238_7223643_7223731_7223812_7223876_7223967_7224070_7224145_7224244_7224320_7224394_7224479_7224553_7224641_7224715_7224808_7224885_7224956
H1_mix_00038596	chr17	+	379	1	FSM	ENSG00000279641.1	ENST00000624722.1	1615	1	41	1195	41	-1195	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGACGTAGCAAAGACGGTTG	864	False	NA	NA	False	NA	NA	NA	7242240	7242619	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7242200_7242600
H1_mix_00038597	chr17	+	559	5	FSM	ENSG00000170291.16	ENST00000574255.6	671	5	2	110	2	0	multi-exon	FALSE	canonical	3	40	junction_1	255.198452189664	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGACCCCTCCTTCATTG	1079	False	NA	-71	True	NA	NA	NA	7252057	7254803	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7252083_7252425_7252597_7252769_7252831_7252917_7252999_7254582
H1_mix_00038600	chr17	+	870	8	FSM	ENSG00000072818.12	ENST00000570457.6	870	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	33.2215813799969	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGGGGCCCCAGGGCAC	37	True	NA	NA	False	NA	NA	NA	7336579	7343953	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7336788_7337262_7337370_7341947_7342068_7342274_7342329_7342415_7342475_7343378_7343563_7343705_7343751_7343860
H1_mix_00038603	chr17	+	1121	7	ISM	ENSG00000174292.13	ENST00000688331.1	2761	13	3490	562	313	481	3prime_fragment	FALSE	canonical	3	19	junction_2	5.47722557505166	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGTAGACGTTCCACCTG	331	False	NA	NA	False	NA	NA	NA	7384578	7389180	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_7384755_7386560_7386656_7386989_7387155_7387377_7387458_7388405_7388705_7388787_7388884_7388970
H1_mix_00038604	chr17	+	4982	8	NNC	ENSG00000169992.10	novel	4374	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	6.58383921245881	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGTGCCTGCTCTGTTGT	-14	True	NA	27	True	TATAAA	-13	NA	7404873	7419860	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_7405611_7408579_7408713_7412156_7412208_7414343_7414494_7414662_7414849_7414955_7415149_7415510_7416108_7416925
H1_mix_00038606	chr17	+	423	2	FSM	ENSG00000170175.11	ENST00000574054.1	583	2	0	160	0	-160	multi-exon	FALSE	canonical	3	35	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGGTGAAGGACGGACCT	22	True	NA	NA	False	NA	NA	NA	7445107	7445614	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7445186_7445269
H1_mix_00038608	chr17	+	583	6	FSM	ENSG00000161955.17	ENST00000436057.5	573	6	-10	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	6.08604962188118	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCATGGGTCAGGTGGTGT	15	False	NA	NA	False	NA	NA	NA	7558291	7560372	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7558376_7559067_7559298_7559623_7559703_7559845_7559894_7560048_7560168_7560349
H1_mix_00038609	chr17	+	2222	12	FSM	ENSG00000161956.13	ENST00000429205.6	2222	12	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_11	169.512914254854	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGTCTTCCTTAAGGG	235	False	NA	28	True	AATAAA	-22	NA	7562225	7571969	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7562264_7563065_7563792_7564624_7564865_7564958_7565071_7565439_7565588_7565716_7565765_7566926_7567005_7570355_7570494_7570680_7570765_7570882_7570934_7571372_7571871_7571908
H1_mix_00038611	chr17	+	414	4	FSM	ENSG00000161960.16	ENST00000584712.5	782	4	-95	463	-93	0	multi-exon	FALSE	canonical	3	9200	junction_1	1542.66918755196	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCCTTGGTCCTAGCACC	NA	False	NA	NA	False	NA	NA	NA	7572730	7575216	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7572865_7574259_7574309_7574545_7574679_7575118
H1_mix_00038612	chr17	+	854	3	FSM	ENSG00000161960.16	ENST00000584054.5	716	3	-93	-45	-93	0	multi-exon	FALSE	canonical	3	9200	junction_1	1683.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCCTTGGTCCTAGCACC	NA	False	NA	NA	False	NA	NA	NA	7572730	7575216	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7572865_7574259_7574309_7574545
H1_mix_00038618	chr17	+	1992	9	FSM	ENSG00000161960.16	ENST00000578324.5	1577	9	-415	0	0	0	multi-exon	FALSE	canonical	3	10834	junction_4	726.94050650655	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAGGCAAAAGAAGGAACC	1018	False	NA	36	True	AATAAA	-10	NA	7573843	7578616	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7574309_7574545_7574679_7575118_7575259_7576523_7576693_7577055_7577166_7577343_7577488_7577568_7577707_7577826_7578245_7578341
H1_mix_00038622	chr17	+	1102	7	FSM	ENSG00000129255.16	ENST00000572936.5	1102	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	194.790200529242	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCTTTTAGTGGAAACAA	135	False	NA	NA	False	NA	NA	NA	7583665	7587681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7583966_7585731_7585798_7585950_7586079_7586655_7586778_7586898_7587018_7587160_7587272_7587425
H1_mix_00038625	chr17	+	1278	8	FSM	ENSG00000129214.15	ENST00000380450.9	1267	8	-25	14	16	4	multi-exon	FALSE	canonical	1	1	junction_1	1.8405855323893	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTAAGAACCCCCTTTGAA	2127	False	NA	NA	False	ATTAAA	-6	NA	7630109	7633358	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7630284_7630415_7630508_7630679_7630870_7631199_7631362_7631588_7631749_7631878_7632016_7632751_7632960_7633203
H1_mix_00038626	chr17	+	3471	13	ISM	ENSG00000132510.11	ENST00000448097.7	6728	24	14805	3	4107	-3	3prime_fragment	FALSE	canonical	3	11	junction_1	4.09182789906364	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCTGTTTCGCTAACGG	294	False	NA	15	True	AATAAA	-11	NA	7849021	7854793	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_7849729_7849820_7849948_7850071_7850178_7851020_7851227_7851329_7851395_7851477_7851550_7851647_7851797_7851950_7852066_7852148_7852337_7852494_7852637_7852999_7853127_7853209_7853381_7853497
H1_mix_00038627	chr17	+	7365	40	FSM	ENSG00000170004.18	ENST00000380358.9	7361	40	-4	0	-4	0	multi-exon	FALSE	canonical	2	6	junction_6	20.9474782296452	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCTCTGTTATTTTTT	-12	True	NA	13	True	TATAAA	-16	NA	7884791	7912755	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7885084_7889663_7889777_7890570_7890742_7890939_7891065_7893285_7893570_7893804_7893936_7894114_7894266_7894414_7894609_7894916_7895151_7895338_7895543_7897082_7897295_7897970_7898103_7898495_7898596_7899010_7899203_7899342_7899544_7899895_7900034_7900289_7900412_7900557_7900732_7900851_7900994_7901243_7901376_7902609_7902728_7902936_7903062_7903271_7903504_7903824_7903992_7904441_7904620_7905099_7905166_7905620_7905707_7905855_7905990_7906552_7906698_7906868_7907032_7907125_7907248_7907352_7907489_7907600_7907703_7907893_7908020_7908401_7908511_7908696_7908830_7909142_7909339_7910427_7910592_7910846_7910974_7911463
H1_mix_00038628	chr17	+	7139	40	NIC	ENSG00000170004.18	novel	4332	20	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	21.5821291158429	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATACTTTCCTTTCTGTGT	-11	True	NA	-2	True	TATAAA	-1	NA	7887750	7912740	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_7887844_7889663_7889777_7890570_7890742_7890939_7891065_7893285_7893570_7893804_7893936_7894126_7894266_7894414_7894609_7894916_7895151_7895338_7895543_7897082_7897295_7897970_7898103_7898495_7898596_7899010_7899203_7899342_7899544_7899895_7900034_7900289_7900412_7900557_7900732_7900851_7900994_7901243_7901376_7902609_7902728_7902936_7903062_7903271_7903504_7903824_7903992_7904441_7904620_7905099_7905166_7905620_7905707_7905855_7905990_7906552_7906698_7906868_7907032_7907125_7907248_7907352_7907489_7907600_7907703_7907893_7908020_7908401_7908511_7908696_7908830_7909142_7909339_7910427_7910592_7910846_7910974_7911463
H1_mix_00038629	chr17	+	1573	10	FSM	ENSG00000170004.18	ENST00000452447.1	1573	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	9.31081940672739	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTACCATATGACCAGTC	1061	False	NA	-49	True	AGTAAA	-8	NA	7890734	7898013	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7890742_7890939_7891065_7893285_7893570_7893804_7893936_7894126_7894266_7894414_7894609_7894916_7895151_7895338_7895543_7897082_7897295_7897970
H1_mix_00038630	chr17	+	3769	19	FSM	ENSG00000170037.14	ENST00000380262.7	3769	19	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_17	41.0859157027783	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGAGTCTCTGGCTCAT	1492	False	NA	15	True	AATAAA	-15	NA	7932154	7949576	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7933350_7934137_7934223_7934464_7934547_7934988_7935146_7936365_7936483_7936700_7936818_7937163_7937263_7939512_7939750_7940095_7940243_7943390_7943525_7944122_7944249_7944475_7944639_7945727_7945987_7947570_7947723_7947915_7947980_7948156_7948328_7948486_7948686_7949084_7949158_7949384
H1_mix_00038631	chr17	+	3648	19	NNC	ENSG00000170037.14	novel	3996	19	NA	NA	2	0	intron_retention	FALSE	canonical	2	6	junction_6	40.6190142788775	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGTCTCTGGCTCATAG	8	True	NA	17	True	AATAAA	-17	NA	7932207	7949578	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_7933350_7934137_7934223_7934464_7934547_7934988_7935146_7936365_7936483_7936700_7936818_7937167_7937263_7939512_7939750_7940095_7940243_7943390_7943525_7944122_7944249_7944475_7944639_7945727_7945987_7947570_7947723_7947915_7947980_7948156_7948328_7948486_7948620_7949084_7949158_7949384
H1_mix_00038632	chr17	+	1708	6	NIC	ENSG00000170037.14	novel	917	8	NA	NA	5	-2	intron_retention	FALSE	canonical	2	3	junction_3	51.8652099195598	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACCAGAAGCAAGCAGCAG	47	False	NA	NA	False	NA	NA	NA	7932246	7936794	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_7933350_7934137_7934223_7934464_7934547_7934918_7935146_7936365_7936483_7936700
H1_mix_00038633	chr17	+	3294	19	NNC	ENSG00000170037.14	novel	2783	19	NA	NA	84	0	intron_retention	FALSE	canonical	2	6	junction_6	51.2967943551165	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGTCTCTGGCTCATAG	345	False	NA	17	True	AATAAA	-17	NA	7932544	7949578	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_7933350_7934137_7934223_7934464_7934547_7934988_7935146_7936365_7936483_7936700_7936818_7937167_7937263_7939512_7939750_7940095_7940243_7943390_7943525_7944122_7944249_7944475_7944639_7945727_7945987_7947570_7947723_7947915_7947980_7948156_7948328_7948486_7948620_7949081_7949138_7949384
H1_mix_00038635	chr17	+	1816	2	FSM	ENSG00000214999.3	ENST00000399413.3	1804	2	-12	0	-12	0	multi-exon	TRUE	canonical	2	4	junction_1	0	173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTTCTCATCATCCACC	NA	False	NA	4	True	AATAAA	-19	NA	8079469	8081565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_8079525_8079804
H1_mix_00038636	chr17	+	4242	26	FSM	ENSG00000178921.14	ENST00000580356.5	4242	26	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	104.328358560844	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCTGTGGCTGTGTCTA	-9	True	NA	NA	False	NA	NA	NA	8249285	8269430	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_8249340_8253858_8254080_8254165_8254302_8255026_8255133_8255804_8255911_8256266_8256649_8256834_8256964_8257806_8257939_8258070_8258200_8262919_8262994_8263108_8263266_8263574_8263637_8263774_8263937_8264211_8264338_8264469_8264602_8264894_8265126_8265287_8265469_8265555_8265640_8265861_8266018_8266233_8266354_8266752_8266899_8267027_8267236_8267371_8267464_8267550_8267666_8268532_8268857_8268953
H1_mix_00038637	chr17	+	2652	7	FSM	ENSG00000178921.14	ENST00000546020.2	2652	7	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_3	56.1211487171577	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTGGGGTCCACAGATG	NA	False	NA	19	True	AATAAA	-23	NA	8266005	8270491	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_8266018_8266233_8266354_8266752_8266899_8267027_8267236_8267371_8267464_8267550_8267666_8268532
H1_mix_00038638	chr17	+	524	2	FSM	ENSG00000198844.12	ENST00000455564.3	2105	2	-23	1604	16	39	multi-exon	FALSE	canonical	3	5	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCTCCCCATGGCTGGA	1	True	NA	NA	False	NA	NA	NA	8310256	8312427	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_8310344_8311990
H1_mix_00038639	chr17	+	547	5	FSM	ENSG00000166579.16	ENST00000582665.5	555	5	8	0	-1	0	multi-exon	FALSE	canonical	2	4	junction_1	125.454174900639	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGAATCTTTGTTGGTC	2	True	NA	NA	False	NA	NA	NA	8435859	8448635	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_8435920_8444259_8444358_8445710_8445865_8446753_8446903_8448549
H1_mix_00038640	chr17	+	591	3	FSM	ENSG00000166579.16	ENST00000584866.1	577	3	-14	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	138.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGATGAGCTAGTTGAATTC	-20	True	NA	NA	False	NA	NA	NA	8435899	8445724	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_8436046_8443926_8444358_8445710
H1_mix_00038643	chr17	+	211	1	FSM	ENSG00000244604.1	ENST00000479856.1	347	1	206	-70	206	70	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGATTTGG	231	False	NA	NA	False	AATAAA	-19	NA	8561435	8561646	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_8561400_8561600
H1_mix_00038645	chr17	+	1568	4	FSM	ENSG00000263400.8	ENST00000579114.5	575	4	48	-1041	42	0	multi-exon	FALSE	canonical	1	2	junction_3	3.85861230093008	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGAGTTTTGGCATAG	64	False	NA	3	True	AATAAA	-18	NA	10729851	10769071	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_10729901_10754228_10754363_10766678_10766857_10767864
H1_mix_00038646	chr17	+	551	5	FSM	ENSG00000065559.15	ENST00000582183.5	551	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	110.291375456107	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGCCAAGACAAGAGATGC	-19	True	NA	NA	False	NA	NA	NA	12020828	12113318	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_12021002_12095574_12095695_12107789_12107910_12110374_12110427_12113232
H1_mix_00038648	chr17	+	3501	9	FSM	ENSG00000065559.15	ENST00000602305.5	961	9	-92	-2448	-51	0	multi-exon	FALSE	canonical	3	29	junction_1	83.6322866780528	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTTTGTAATTTGATTT	NA	False	NA	15	True	AATAAA	-15	NA	12020777	12143730	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_12021002_12095574_12095695_12107789_12107910_12110374_12110427_12113232_12113361_12125293_12125372_12129138_12129288_12139838_12139885_12141146
H1_mix_00038649	chr17	+	256	1	FSM	ENSG00000266297.1	ENST00000578242.1	98	1	-162	4	-162	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCTGACCGGCTCGGCTT	NA	False	NA	NA	False	NA	NA	NA	12081736	12081992	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_12081700_12082000
H1_mix_00038651	chr17	+	876	7	ISM	ENSG00000006740.18	ENST00000262444.13	3001	22	154360	31550	-5561	-11	internal_fragment	FALSE	canonical	3	92	junction_3	9.92891400573765	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATCTGCTGTGTCTGGGA	NA	False	NA	-1	True	ATTAAA	-2	NA	12944119	12959034	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_12944197_12949139_12949252_12949648_12949731_12952500_12952582_12955866_12955981_12956654_12956747_12958716
H1_mix_00038653	chr17	+	7478	1	FSM	ENSG00000266709.1	ENST00000583262.1	1652	1	-2801	-3025	-2801	3025	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTGCTGTTTGTAAAAAT	-1	True	NA	NA	False	TTTAAA	-36	NA	14301052	14308530	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_14301100_14308500
H1_mix_00038654	chr17	+	2038	1	FSM	ENSG00000266378.1	ENST00000584683.1	2140	1	172	-70	172	70	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAGGAAAGAAAAGA	NA	False	NA	NA	False	AAAAAG	-14	NA	14327506	14329544	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_14327500_14329500
H1_mix_00038660	chr17	+	5527	5	NIC	ENSG00000187607.16	novel	5443	6	NA	NA	9	0	intron_retention	FALSE	canonical	3	137	junction_4	29.3001706479672	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCTGCACAGCCTCCTT	NA	False	NA	NA	False	CATAAA	-44	NA	15699589	15720452	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_15700367_15701151_15701241_15706386_15706502_15708154_15708248_15715999
H1_mix_00038663	chr17	+	816	5	ISM	ENSG00000187607.16	ENST00000395894.6	5443	6	13	12366	0	-3	5prime_fragment	FALSE	canonical	3	79	junction_1	54.2148503640838	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTGAGATTAGACACGTA	-3	True	NA	7	True	AATAAA	-19	NA	15699751	15708421	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_15699778_15700047_15700367_15701151_15701241_15706386_15706502_15708154
H1_mix_00038664	chr17	+	869	6	NIC	ENSG00000187607.16	novel	5541	6	NA	NA	2	107	intron_retention	FALSE	canonical	0	0	junction_5	84.3350460959144	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTACTTGGCTATTCAA	0	True	NA	NA	False	GATAAA	-18	NA	15699754	15710045	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_15699778_15700047_15700367_15701151_15701241_15706386_15706502_15708154_15708248_15709815
H1_mix_00038666	chr17	+	958	1	FSM	ENSG00000179277.9	ENST00000495167.3	958	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGCCCAGAGGGCCAGCC	435	False	NA	NA	False	NA	NA	NA	15786617	15787575	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_15786600_15787600
H1_mix_00038667	chr17	+	375	1	FSM	ENSG00000233090.1	ENST00000435593.1	184	1	-255	64	-255	-64	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCACCTGATTTGAGTCT	6424	False	NA	NA	False	NA	NA	NA	15792606	15792981	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_15792600_15793000
H1_mix_00038668	chr17	+	930	6	FSM	ENSG00000011295.16	ENST00000466729.5	908	6	-22	0	-22	0	multi-exon	FALSE	canonical	2	3	junction_3	270.834709740092	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCGCAGAACAGGTAAGTACA	9	False	NA	NA	False	NA	NA	NA	15999761	16004251	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16000033_16000117_16000383_16001914_16002026_16002656_16002832_16003830_16003888_16004200
H1_mix_00038669	chr17	+	574	2	FSM	ENSG00000011295.16	ENST00000583704.1	552	2	-22	0	0	0	multi-exon	FALSE	canonical	3	402	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGCAAATGGAGATGGCG	31	False	NA	NA	False	AGTAAA	-15	NA	15999801	16000460	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16000033_16000117
H1_mix_00038670	chr17	+	1382	10	FSM	ENSG00000011295.16	ENST00000497842.6	1360	10	-22	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	243.413127454712	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGGAGAATAATGTCTAGT	31	False	NA	NA	False	NA	NA	NA	15999801	16027535	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16000246_16001914_16002026_16002792_16002832_16003830_16003888_16004200_16004263_16006473_16006569_16024488_16024583_16025016_16025172_16026539_16026703_16027373
H1_mix_00038671	chr17	+	636	5	FSM	ENSG00000011295.16	ENST00000470399.1	636	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	234.483474897486	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTTACCTCCTTGGAG	11	False	NA	NA	False	TTTAAA	-6	NA	15999833	16003853	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16000033_16000117_16000246_16001914_16002026_16002656_16002832_16003830
H1_mix_00038673	chr17	+	1276	6	FSM	ENSG00000108474.17	ENST00000395844.8	1257	6	-19	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	36.8423669163641	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTCTGATTGAAGCATC	NA	False	NA	NA	False	NA	NA	NA	16217190	16326411	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16217462_16233970_16234071_16299887_16299979_16313546_16313615_16317774_16317909_16325799
H1_mix_00038674	chr17	+	699	3	FSM	ENSG00000108474.17	ENST00000431149.5	699	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	6.5	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACGGGACTCAACTGC	NA	False	NA	NA	False	NA	NA	NA	16326484	16347674	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16326906_16342572_16342721_16347544
H1_mix_00038675	chr17	+	2777	15	FSM	ENSG00000187688.15	ENST00000338560.12	2779	15	0	2	0	0	multi-exon	TRUE	canonical	1	1	junction_2	1.11574995370095	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCTTCTGGAAACATTAT	7	True	NA	23	True	AATATA	-15	NA	16415570	16437001	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16415834_16417561_16417869_16420114_16420249_16422598_16422890_16423468_16423768_16426098_16426270_16426721_16426878_16427448_16427548_16428316_16428388_16428816_16428983_16431783_16431851_16431965_16432301_16433573_16433699_16434889_16434970_16436788
H1_mix_00038676	chr17	+	904	5	FSM	ENSG00000175061.19	ENST00000663781.1	904	5	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	1371.4202492307	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	12	False	NA	-16	True	AATAAA	-30	NA	16439000	16442028	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16439030_16439326_16439415_16440184_16440254_16441073_16441131_16441367
H1_mix_00038678	chr17	+	1149	6	FSM	ENSG00000175061.19	ENST00000484836.2	1149	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	1407.83612682727	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	0	True	NA	-16	True	AATAAA	-30	NA	16439036	16442028	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16439061_16439326_16439415_16439527_16439704_16440110_16440254_16441073_16441131_16441367
H1_mix_00038679	chr17	+	2991	4	FSM	ENSG00000188933.16	ENST00000341745.3	3233	4	233	9	233	-9	multi-exon	FALSE	canonical	1	1	junction_3	5.43650214343336	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTCTATGTACTGTTTT	NA	False	NA	1	True	ATTAAA	-9	NA	16798241	16804446	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16798531_16799950_16800372_16801035_16801129_16802258
H1_mix_00038680	chr17	+	4075	23	NIC	ENSG00000133030.22	novel	3846	24	NA	NA	22	-15	intron_retention	FALSE	canonical	3	20	junction_18	38.4382353117868	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATTAAATCTTGCACAAA	-5	True	NA	58	True	NA	NA	NA	17042478	17185539	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_17042972_17075709_17075788_17078010_17078077_17126701_17126854_17131616_17131702_17136218_17136451_17137915_17138076_17142626_17142766_17143555_17143670_17146035_17146093_17147318_17147388_17150143_17150234_17154305_17154416_17158431_17159003_17161239_17161357_17171717_17171866_17172697_17172816_17173915_17174076_17176425_17176513_17177249_17177413_17180002_17180089_17180606_17180670_17184822
H1_mix_00038681	chr17	+	1635	5	FSM	ENSG00000205309.14	ENST00000616989.1	1635	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	29.1322415890024	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGGCCTGCCCTAA	-22	True	NA	16	True	AATAAA	-22	NA	17303334	17347661	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_17303818_17306542_17306644_17323184_17323246_17344793_17344927_17346804
H1_mix_00038682	chr17	+	1720	6	NIC	ENSG00000205309.14	novel	1408	6	NA	NA	7	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	46.2142835062927	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAAGGCTGTGGCCTGCC	-15	True	NA	12	True	AATAAA	-18	NA	17303341	17347657	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_17303818_17304363_17304478_17306542_17306644_17323184_17323246_17344793_17344909_17346804
H1_mix_00038683	chr17	+	540	3	FSM	ENSG00000141034.10	ENST00000459843.5	540	3	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTATAGGTGAAAGAACT	NA	False	NA	NA	False	AGTAAA	-13	NA	18054135	18062183	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18054235_18058867_18058970_18061844
H1_mix_00038684	chr17	+	488	3	FSM	ENSG00000108591.10	ENST00000578173.5	535	3	-15	62	-9	-44	multi-exon	FALSE	canonical	3	300	junction_2	8.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCCACCCTGTGTGTGA	-44	True	NA	NA	False	NA	NA	NA	18087911	18098420	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18088088_18093812_18093974_18098269
H1_mix_00038685	chr17	+	623	4	FSM	ENSG00000108591.10	ENST00000577771.5	641	4	18	0	-11	0	multi-exon	FALSE	canonical	3	300	junction_2	8.52447456836295	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAAATCCTTGGCACCAA	-46	True	NA	NA	False	NA	NA	NA	18087909	18099210	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18088088_18093812_18093974_18098269_18098360_18099016
H1_mix_00038686	chr17	+	1212	2	NIC	ENSG00000091536.20	novel	11811	66	NA	NA	2437	535	intron_retention	FALSE	canonical	3	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCCCCAGGAGACCCCCA	NA	False	NA	NA	False	NA	NA	NA	18148450	18150510	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_18149581_18150428
H1_mix_00038687	chr17	+	3155	4	FSM	ENSG00000177427.13	ENST00000578621.5	540	4	-637	-1978	-589	-1	multi-exon	FALSE	canonical	1	2	junction_3	28.2960539062723	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAGGCTGGATAAGGGAG	NA	False	NA	18	True	AATAAA	-26	NA	18260007	18265780	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18260738_18262713_18262868_18263085_18263249_18263672
H1_mix_00038688	chr17	+	1871	2	FSM	ENSG00000220161.4	ENST00000577684.1	1871	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCCACGGTTTGTAGTC	NA	False	NA	NA	False	AATAAA	-14	NA	18411158	18414380	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18412799_18414149
H1_mix_00038689	chr17	+	1549	1	FSM	ENSG00000174977.8	ENST00000447794.1	1348	1	3	-204	3	204	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	NA	False	NA	28	True	AATAAA	-39	NA	18650197	18651746	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18650200_18651700
H1_mix_00038690	chr17	+	490	1	FSM	ENSG00000224126.2	ENST00000428091.2	497	1	123	-116	123	116	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTGGATTTGTTTTTCT	5634	False	NA	NA	False	TTTAAA	-37	NA	18677383	18677873	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18677400_18677900
H1_mix_00038691	chr17	+	680	6	FSM	ENSG00000171928.14	ENST00000571018.5	718	6	38	0	1	0	multi-exon	FALSE	canonical	3	30	junction_2	131.797420308593	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGCTTTGTTTTTCCAC	-4	True	NA	NA	False	NA	NA	NA	18781180	18805661	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18781306_18789352_18789436_18797578_18797669_18798811_18798944_18804137_18804267_18805540
H1_mix_00038692	chr17	+	213	2	FSM	ENSG00000171928.14	ENST00000582288.1	336	2	0	123	0	-123	multi-exon	FALSE	canonical	3	268	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCATGTTGCTAATTTGA	23	False	NA	NA	False	NA	NA	NA	18781286	18789546	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18781306_18789352
H1_mix_00038694	chr17	+	507	1	FSM	ENSG00000265478.2	ENST00000584957.2	985	1	-48	526	-48	-526	mono-exon	FALSE	NA	NA	NA	NA	NA	471	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGGCCATCTCCAGTT	NA	False	NA	NA	False	NA	NA	NA	18809907	18810414	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18809900_18810400
H1_mix_00038695	chr17	+	995	9	FSM	ENSG00000141127.15	ENST00000432893.6	1014	9	19	0	-11	0	multi-exon	FALSE	canonical	2	4	junction_1	90.7337278799896	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTAGACCTCTTTTATT	-27	True	NA	NA	False	NA	NA	NA	18856317	18923984	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18856477_18865801_18865953_18867281_18867335_18872582_18872650_18877697_18877871_18882567_18882684_18889821_18889878_18911102_18911252_18923913
H1_mix_00038700	chr17	+	4646	10	NIC	ENSG00000072134.16	novel	4664	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	41	junction_5	49.457052075513	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGGTTTCTGGCTGTGTCC	NA	False	NA	17	True	TATAAA	-25	NA	19237376	19336715	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_19237532_19281954_19282078_19282949_19283715_19309884_19309998_19312051_19312145_19313122_19313280_19328710_19328888_19329560_19329648_19331852_19332069_19333955
H1_mix_00038704	chr17	+	2702	5	FSM	ENSG00000166484.20	ENST00000299612.11	2715	5	13	0	13	0	multi-exon	FALSE	canonical	3	3	junction_1	110.377760441132	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGGTGTAATTTTTGGA	11	True	NA	24	True	AATACA	-21	NA	19377765	19383544	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_19378102_19380607_19381687_19381780_19382467_19382812_19382947_19383077
H1_mix_00038707	chr17	+	3287	17	FSM	ENSG00000142494.13	ENST00000270570.8	3280	17	-11	4	-11	-4	multi-exon	TRUE	canonical	2	4	junction_8	3.18198051533946	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTTTGCCTCTACATTT	-9	True	NA	NA	False	AATAAA	-11	NA	19533842	19579030	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_19534075_19542392_19542495_19546434_19546504_19547984_19548134_19549634_19549678_19551423_19551469_19555211_19555310_19555592_19555691_19555795_19555910_19555994_19556063_19560187_19560297_19560417_19560494_19566789_19566860_19567095_19567229_19571477_19571573_19572779_19572862_19577326
H1_mix_00038708	chr17	+	634	4	FSM	ENSG00000072210.19	ENST00000467473.6	617	4	-17	0	10	0	multi-exon	FALSE	canonical	1	1	junction_1	162.876231128629	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACATATGTGTTTACTGTG	NA	False	NA	NA	False	NA	NA	NA	19648162	19652655	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_19648266_19648934_19649125_19651546_19651779_19652546
H1_mix_00038709	chr17	+	1649	8	FSM	ENSG00000072210.19	ENST00000395575.7	3276	8	-260	1887	0	0	multi-exon	FALSE	canonical	3	9	junction_3	129.20052441923	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAATCATACCAAAAA	NA	False	NA	-93	True	AATGAA	-8	NA	19648525	19675644	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19661126_19661269_19663332_19663500_19664947_19665048_19671720_19671957_19675557
H1_mix_00038710	chr17	+	1558	9	FSM	ENSG00000072210.19	ENST00000630662.2	1558	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	120.922431231761	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACGTCCCAACATTCCC	11	False	NA	5	True	AATAAA	-13	NA	19648805	19675742	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19664947_19665048_19675557
H1_mix_00038711	chr17	+	328	1	FSM	ENSG00000231096.1	ENST00000418418.1	390	1	47	15	47	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTCTCATATTAAGTCTG	NA	False	NA	NA	False	AAGAAA	-36	NA	19840172	19840500	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_19840200_19840500
H1_mix_00038712	chr17	+	4027	14	FSM	ENSG00000128487.19	ENST00000679048.1	4316	14	289	0	-166	0	multi-exon	FALSE	canonical	1	5	junction_1	75.0851981568173	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAACACAAAAAATAAA	NA	False	NA	-32	True	NA	NA	NA	20009153	20314710	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_20009425_20096630_20096799_20110426_20110563_20204332_20205913_20227412_20227621_20231757_20231832_20232199_20232406_20245925_20246072_20247218_20247320_20253504_20253587_20257450_20257608_20260191_20260295_20306022_20306083_20313975
H1_mix_00038713	chr17	+	3313	5	FSM	ENSG00000128487.19	ENST00000679819.1	2726	5	-23	-564	-2	3	multi-exon	FALSE	canonical	3	11	junction_4	87.2965491872388	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCACCTTTTTATTTTA	NA	False	NA	14	True	AATAAA	-25	NA	20155991	20239430	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_20156237_20227412_20227621_20231757_20231832_20232199_20232415_20236859
H1_mix_00038714	chr17	+	3283	5	FSM	ENSG00000128487.19	ENST00000679740.1	3081	5	-66	-136	-2	0	multi-exon	FALSE	canonical	3	38	junction_4	79.3473376995095	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTATATTCTTTTCAGT	NA	False	NA	-7	True	AATAAA	-4	NA	20155991	20239409	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_20156237_20227412_20227621_20231757_20231832_20232199_20232406_20236859
H1_mix_00038715	chr17	+	375	1	FSM	ENSG00000232889.2	ENST00000448505.2	178	1	-265	68	-265	-68	mono-exon	FALSE	NA	NA	NA	NA	NA	286	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCACCTGATTTGAGTCT	6428	False	NA	NA	False	NA	NA	NA	20595265	20595640	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_20595300_20595600
H1_mix_00038716	chr17	+	3699	4	FSM	ENSG00000233098.10	ENST00000577537.5	3727	4	28	0	18	0	multi-exon	FALSE	canonical	2	6	junction_2	6.34209919681348	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTACTTGATCTTTGTGGG	258	False	NA	NA	False	AATAAA	-20	NA	20868460	20905230	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_20868686_20887591_20887850_20892229_20892433_20902217
H1_mix_00038717	chr17	+	4539	3	FSM	ENSG00000233098.10	ENST00000662319.2	4618	3	79	0	-60	0	multi-exon	FALSE	canonical	2	8	junction_1	19.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTGACCTCAACTGATC	-3	True	NA	NA	False	NA	NA	NA	20921091	20933416	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_20921170_20924358_20924834_20929430
H1_mix_00038719	chr17	+	1850	1	FSM	ENSG00000109016.18	ENST00000581020.1	1910	1	30	30	30	-30	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCGACAAGAGCGAGGAG	33	False	NA	NA	False	NA	NA	NA	21126993	21128843	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_21127000_21128800
H1_mix_00038720	chr17	+	1627	2	FSM	ENSG00000235530.7	ENST00000661579.1	1698	2	0	71	0	-71	multi-exon	FALSE	canonical	2	4	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGCCTGGGTGATGGAGT	-22	True	NA	NA	False	NA	NA	NA	21214321	21219586	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_21214451_21218088
H1_mix_00038721	chr17	+	5568	3	FSM	ENSG00000034152.19	ENST00000477540.1	927	3	-3841	-800	-3841	0	multi-exon	FALSE	canonical	3	174	junction_1	2	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTAAAGGTTGTGTGAGA	NA	False	NA	102	True	ATTAAA	-17	NA	21307845	21315232	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_21312282_21313491_21313538_21314146
H1_mix_00038723	chr17	+	439	1	FSM	ENSG00000244582.2	ENST00000482905.2	502	1	-25	88	-25	-88	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGGAGAACCAATGGGAGA	NA	False	NA	NA	False	ACTAAA	-29	NA	21504532	21504971	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_21504500_21505000
H1_mix_00038724	chr17	+	918	1	FSM	ENSG00000263563.7	ENST00000583708.6	917	1	-1	0	-1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCAGTCTTGCATTAGC	506	False	NA	NA	False	NA	NA	NA	22204091	22205009	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_22204100_22205000
H1_mix_00038725	chr17	+	699	4	FSM	ENSG00000109046.15	ENST00000578312.5	692	4	-7	0	-3	0	multi-exon	FALSE	canonical	2	3	junction_2	240.893245143062	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGCCAAGACAAAATAGTG	NA	False	NA	NA	False	NA	NA	NA	27294072	27303411	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_27294436_27297186_27297309_27301787_27301957_27303366
H1_mix_00038729	chr17	+	2956	10	NNC	ENSG00000109046.15	novel	4187	9	NA	NA	2	-8	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_6	186.77794302326	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAACAGTATATTGCA	12	False	NA	30	True	ATTAAA	-12	NA	27294123	27313623	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_27294436_27301787_27301957_27303366_27303636_27304779_27304912_27306781_27306883_27307743_27307908_27309099_27309273_27310060_27310175_27311508_27311617_27312209
H1_mix_00038730	chr17	+	2981	10	NNC	ENSG00000109046.15	novel	5105	9	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_6	181.757333813692	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAGTATATTGCAAAT	2	True	NA	33	True	ATTAAA	-15	NA	27294113	27313626	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_27294436_27301787_27301957_27303366_27303636_27304779_27304912_27306781_27306883_27307743_27307920_27309099_27309273_27310060_27310175_27311508_27311617_27312209
H1_mix_00038732	chr17	+	1179	4	ISM	ENSG00000141068.15	ENST00000644974.2	6026	21	-1	43328	-1	105	5prime_fragment	FALSE	canonical	3	45	junction_1	3.55902608401044	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCTCCTTCTGGGCAGC	2	True	NA	NA	False	NA	NA	NA	27456446	27583107	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_27456875_27550567_27550709_27577491_27577640_27582645
H1_mix_00038733	chr17	+	6373	16	Fusion	ENSG00000141068.15_ENSG00000266728.5	novel	384	5	NA	NA	339	0	multi-exon	FALSE	canonical	1	2	junction_1	16.6799946709291	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGGGCTTGTCTTTGCT	10002	False	NA	9	True	AATAAA	-15	NA	27587450	27626435	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr17_+_27587675_27588474_27588536_27590810_27590895_27592360_27592423_27592519_27592627_27597267_27597437_27601359_27601402_27603833_27603889_27604679_27604729_27605433_27605814_27607913_27608011_27609195_27609330_27610066_27610199_27611493_27611630_27617294_27617429_27621928
H1_mix_00038736	chr17	+	6624	7	Fusion	ENSG00000141068.15_ENSG00000266728.5	novel	2048	17	NA	NA	3040	0	intron_retention	FALSE	canonical	3	40	junction_6	9.82626864865578	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGGGCTTGTCTTTGCT	NA	False	NA	9	True	AATAAA	-15	NA	27604329	27626435	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr17_+_27605814_27607913_27608011_27609195_27609330_27610066_27610199_27611493_27611630_27617294_27617429_27621928
H1_mix_00038738	chr17	+	1496	2	FSM	ENSG00000087095.13	ENST00000582037.2	1503	2	0	7	0	-7	multi-exon	FALSE	canonical	3	11	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTAATTATGCGTCTCTT	163	False	NA	9	True	AATAAA	-22	NA	28042838	28048919	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28043332_28047916
H1_mix_00038739	chr17	+	1156	1	FSM	ENSG00000267644.1	ENST00000587058.1	721	1	515	-950	515	950	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGATTTTTCTCTATA	NA	False	NA	NA	False	NA	NA	NA	28219799	28220955	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28219800_28221000
H1_mix_00038740	chr17	+	876	2	FSM	ENSG00000237575.4	ENST00000441253.2	1076	2	196	4	196	-4	multi-exon	FALSE	canonical	1	2	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATGTGTGCCTTTGTATT	NA	False	NA	24	True	AATAAA	-20	NA	28226758	28228061	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28226879_28227305
H1_mix_00038742	chr17	+	1546	6	FSM	ENSG00000109079.10	ENST00000544907.6	1656	6	110	0	-49	0	multi-exon	FALSE	canonical	2	5	junction_1	46.1666546329708	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGCAGAATCAATCTGAG	-51	True	NA	NA	False	NA	NA	NA	28335711	28345255	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28335857_28340308_28340479_28341236_28341327_28341403_28341457_28342246_28342443_28344363
H1_mix_00038744	chr17	+	1930	1	FSM	ENSG00000277450.1	ENST00000613598.1	307	1	-1553	-70	-1553	70	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAATTTGGAGGGGGTAG	19	True	NA	NA	False	NA	NA	NA	28371702	28373632	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28371700_28373600
H1_mix_00038745	chr17	+	5963	38	NNC	ENSG00000109111.15	novel	6404	37	NA	NA	97	-446	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	86.3805685884081	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCCAAAGCCTCTCTCT	4	True	NA	26	True	AATAAA	-18	NA	28662301	28702233	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_28662343_28670571_28670674_28673370_28673511_28674282_28674442_28674536_28674614_28674969_28675163_28675400_28675486_28676156_28676431_28677714_28677817_28678075_28678193_28678544_28678635_28678820_28678964_28681255_28681405_28681881_28681981_28682726_28682857_28682941_28683093_28683267_28683423_28683620_28683817_28684585_28684726_28684843_28684962_28686338_28686416_28686653_28686790_28687087_28687226_28687303_28687472_28688090_28688219_28689353_28689562_28690081_28690230_28690920_28691064_28693695_28693837_28695351_28695548_28696843_28697083_28697619_28697734_28697905_28698031_28699780_28699894_28700172_28700251_28700345_28700513_28700940_28701129_28701438
H1_mix_00038746	chr17	+	1969	3	FSM	ENSG00000109111.15	ENST00000583972.1	1969	3	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_1	10.5	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAC	5972	False	NA	NA	False	NA	NA	NA	28688669	28691849	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28689562_28690081_28690230_28690920
H1_mix_00038748	chr17	+	3902	14	NNC	ENSG00000160602.14	novel	782	5	NA	NA	-773	0	intron_retention	FALSE	canonical	3	21	junction_1	10.123497770069	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGAGTGTGGTGTCTT	19	True	NA	12	True	AATAAA	-14	NA	28728014	28743455	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_28728257_28733982_28734189_28734771_28735005_28735239_28735372_28737305_28737737_28737818_28738001_28738094_28738246_28738670_28738748_28739083_28739202_28740462_28740614_28740821_28740986_28741077_28741237_28741412_28741572_28741958
H1_mix_00038749	chr17	+	525	4	FSM	ENSG00000160602.14	ENST00000593261.1	547	4	22	0	22	0	multi-exon	FALSE	canonical	2	3	junction_3	19.4821855949366	3472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGCTTTCGAGGCTGCGG	42	False	NA	NA	False	NA	NA	NA	28728837	28735352	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28728861_28733982_28734189_28734771_28734955_28735239
H1_mix_00038750	chr17	+	1787	3	FSM	ENSG00000076604.16	ENST00000580073.1	449	3	0	-1338	0	43	multi-exon	FALSE	canonical	3	242	junction_1	10.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTCCAGCCTGACTTA	3689	False	NA	27	True	AATAAA	-21	NA	28748123	28750080	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28748179_28748261_28748424_28748510
H1_mix_00038753	chr17	+	701	3	FSM	ENSG00000132591.12	ENST00000583487.1	695	3	0	-6	0	6	multi-exon	FALSE	canonical	3	25	junction_2	244.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTTTATTTATTTATTT	3964	False	NA	39	True	AATAAA	-28	NA	28858984	28861067	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28859114_28859202_28859284_28860576
H1_mix_00038755	chr17	+	446	2	FSM	ENSG00000167543.16	ENST00000580132.1	446	2	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_1	0	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACGCCTGGAGACAGGCG	46	False	NA	NA	False	NA	NA	NA	29568759	29569392	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_29568831_29569017
H1_mix_00038756	chr17	+	3828	14	NNC	ENSG00000198720.13	novel	3550	15	NA	NA	41	-16	intron_retention	FALSE	canonical	2	4	junction_5	16.0679032481808	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGCTTCATACCGGAGGC	26	True	NA	-5	True	AATAAA	-1	NA	29593172	29614744	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_29593736_29607741_29607878_29607985_29608111_29608194_29608241_29608850_29608995_29609139_29609276_29609354_29609422_29610684_29610767_29611578_29611644_29611875_29612007_29612115_29612274_29612401_29612555_29612651_29612816_29612886
H1_mix_00038757	chr17	+	235	1	FSM	ENSG00000252657.1	ENST00000516848.1	126	1	-124	15	-124	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGGAGACAGCCCTTTC	NA	False	NA	NA	False	NA	NA	NA	29777494	29777729	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_29777500_29777700
H1_mix_00038758	chr17	+	482	3	FSM	ENSG00000126653.18	ENST00000584423.5	482	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	113	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGTAGTTATATATATAT	NA	False	NA	NA	False	NA	NA	NA	30116780	30128163	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_30116864_30118079_30118174_30127858
H1_mix_00038759	chr17	+	1320	8	NIC	ENSG00000126653.18	novel	1242	8	NA	NA	-2	-11	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	192.783901436456	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGACAACAAAATGATCAGAA	-15	True	NA	5	True	AAGAAA	-6	NA	30116804	30185182	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_30116864_30118079_30118174_30163066_30163163_30172541_30172599_30178070_30178200_30179089_30179298_30180907_30181017_30184614
H1_mix_00038760	chr17	+	560	4	FSM	ENSG00000126653.18	ENST00000479218.6	540	4	-20	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	16.539514973407	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAAGCATTTATAGAAATT	-13	True	NA	NA	False	TATAAA	-35	NA	30116806	30128236	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_30116864_30117301_30117333_30118079_30118174_30127858
H1_mix_00038764	chr17	+	2854	6	NIC	ENSG00000214719.13	novel	1273	7	NA	NA	-465	1	intron_retention	FALSE	canonical	3	99	junction_1	20.0339711490258	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTATTTTAAGAAGTTAAGT	24	True	NA	NA	False	AATAAA	-20	NA	30600426	30634324	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_30601013_30607551_30607666_30608429_30608563_30610888_30610943_30631754_30633391_30633993
H1_mix_00038765	chr17	+	1644	7	NIC	ENSG00000214719.13	novel	1273	7	NA	NA	-425	1	combination_of_known_junctions	FALSE	canonical	3	19	junction_5	41.2458752146469	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTATTTTAAGAAGTTAAGT	1	True	NA	NA	False	AATAAA	-20	NA	30600466	30634324	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_30601013_30607551_30607666_30608429_30608563_30610888_30610943_30631754_30631928_30633097_30633391_30633993
H1_mix_00038766	chr17	+	1273	7	FSM	ENSG00000214719.13	ENST00000651170.1	1273	7	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_5	28.6569751059358	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTAAGAAGTTAAGTTG	168	False	NA	NA	False	AATAAA	-22	NA	30600891	30634326	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_30601013_30607551_30607666_30608429_30608563_30610888_30610943_30631754_30631980_30633097_30633391_30633993
H1_mix_00038769	chr17	+	1191	8	ISM	ENSG00000264538.7	ENST00000578195.6	985	9	-243	6368	-25	0	5prime_fragment	FALSE	canonical	3	85	junction_1	113.228502937869	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTATATTGATTATTTC	-6	True	NA	-2	True	AATATA	-2	NA	30731642	30770034	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_30732124_30734896_30734944_30735032_30735098_30743300_30743370_30759490_30759540_30766502_30766589_30768833_30769065_30769871
H1_mix_00038770	chr17	+	3428	10	Fusion	ENSG00000266490.1_ENSG00000264538.7	novel	985	9	NA	NA	-25	0	intron_retention	FALSE	canonical	3	34	junction_9	138.160489966033	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTTGAACTTATTCCAAC	-6	True	NA	36	True	AATAAA	-19	NA	30731642	30792833	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr17_+_30732124_30734896_30734944_30735032_30735098_30743300_30743370_30759490_30759540_30766502_30766589_30768833_30769065_30769871_30769966_30784782_30784893_30790637
H1_mix_00038771	chr17	+	1560	7	FSM	ENSG00000264538.7	ENST00000582557.5	1560	7	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_2	89.566858950296	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATTGCCTTTGTTTCTT	2371	False	NA	14	True	AATATA	-18	NA	30734062	30770050	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_30734944_30735032_30735098_30743300_30743370_30759490_30759540_30766502_30766589_30768833_30769065_30769871
H1_mix_00038774	chr17	+	2098	6	FSM	ENSG00000181481.14	ENST00000535306.6	2098	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	42.3622473435959	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTGAGTTCTGTGAGT	16	True	NA	21	True	AATAAA	-21	NA	30971059	30999911	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_30971446_30984616_30984761_30987943_30988107_30993839_30993905_30997241_30997332_30998661
H1_mix_00038776	chr17	+	477	4	FSM	ENSG00000266865.7	ENST00000578883.1	477	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	3.29983164553722	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTATTTTTATTATTGTT	NA	False	NA	NA	False	ATTAAA	-14	NA	31024340	31034162	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_31024427_31032425_31032507_31033294_31033366_31033923
H1_mix_00038777	chr17	+	12362	57	FSM	ENSG00000196712.19	ENST00000356175.7	12362	57	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_16	5.5548057884087	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAGGAGTTATTTAATTT	19	True	NA	39	True	AGTAAA	-25	NA	31094926	31377677	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_31095370_31155982_31156127_31159009_31159094_31163185_31163377_31169890_31169998_31181421_31181490_31181709_31181786_31182507_31182666_31200421_31200596_31201036_31201160_31201410_31201486_31206239_31206372_31214450_31214586_31219004_31219119_31221849_31221930_31223443_31223568_31225094_31225251_31226434_31226685_31227217_31227292_31227522_31227607_31229024_31229466_31229834_31229975_31230259_31230383_31230841_31230926_31232072_31232190_31232699_31232882_31233001_31233214_31235610_31235773_31235917_31236022_31248983_31249120_31258343_31258503_31259031_31259130_31260368_31260516_31261710_31261858_31265228_31265340_31325819_31326253_31327498_31327840_31330295_31330499_31334837_31335032_31336332_31336474_31336634_31336915_31337367_31337583_31337818_31337881_31338024_31338140_31338703_31338806_31340504_31340646_31343008_31343136_31349119_31349252_31350182_31350319_31352256_31352415_31356459_31356583_31356959_31357091_31357268_31357370_31358479_31358623_31358968_31359016_31360486_31360704_31374012
H1_mix_00038778	chr17	+	2880	15	FSM	ENSG00000196712.19	ENST00000431387.8	2889	15	0	9	0	-9	multi-exon	FALSE	canonical	2	4	junction_4	3.3166247903554	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAACTTTGGTGTGTCTTT	-6	True	NA	NA	False	AATAAA	-5	NA	31094976	31222755	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_31095370_31155982_31156127_31159009_31159094_31163185_31163377_31169890_31169998_31181421_31181490_31181709_31181786_31182507_31182666_31200421_31200596_31201036_31201160_31201410_31201486_31206239_31206372_31214450_31214586_31219004_31219119_31221849
H1_mix_00038779	chr17	+	12373	58	FSM	ENSG00000196712.19	ENST00000358273.9	12373	58	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_16	5.37254743375783	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATGAGGAGTTATTTAAT	-6	True	NA	37	True	AGTAAA	-23	NA	31094976	31377675	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_31095370_31155982_31156127_31159009_31159094_31163185_31163377_31169890_31169998_31181421_31181490_31181709_31181786_31182507_31182666_31200421_31200596_31201036_31201160_31201410_31201486_31206239_31206372_31214450_31214586_31219004_31219119_31221849_31221930_31223443_31223568_31225094_31225251_31226434_31226685_31227217_31227292_31227522_31227607_31229024_31229466_31229834_31229975_31230259_31230383_31230841_31230926_31232072_31232190_31232699_31232882_31233001_31233214_31235610_31235773_31235917_31236022_31248983_31249120_31252937_31253001_31258343_31258503_31259031_31259130_31260368_31260516_31261710_31261858_31265228_31265340_31325819_31326253_31327498_31327840_31330295_31330499_31334837_31335032_31336332_31336474_31336634_31336915_31337367_31337583_31337818_31337881_31338024_31338140_31338703_31338806_31340504_31340646_31343008_31343136_31349119_31349252_31350182_31350319_31352256_31352415_31356459_31356583_31356959_31357091_31357268_31357370_31358479_31358623_31358968_31359016_31360486_31360704_31374012
H1_mix_00038781	chr17	+	4102	13	NIC	ENSG00000185158.12	novel	3091	15	NA	NA	-495	229	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	27.7198284426309	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATCTGGCTACCCTGGGG	-11	True	NA	NA	False	NA	NA	NA	32007376	32050811	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_32008133_32020696_32020804_32021392_32022826_32024710_32024783_32027768_32027841_32030655_32030728_32031377_32031459_32034909_32034982_32035564_32035640_32045699_32045819_32047760_32047902_32049101_32049395_32050002
H1_mix_00038782	chr17	+	1033	2	FSM	ENSG00000185158.12	ENST00000581370.1	393	2	-658	18	-494	-18	multi-exon	FALSE	canonical	3	11	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAATGTTCAAATGTTCT	-10	True	NA	-5	True	NA	NA	NA	32007377	32017202	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_32008133_32016924
H1_mix_00038787	chr17	+	928	1	FSM	ENSG00000277511.1	ENST00000613639.1	860	1	-80	12	-80	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCCAAAGTAAGCTGTGAC	NA	False	NA	NA	False	ATTAAA	-4	NA	32127514	32128442	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_32127500_32128400
H1_mix_00038788	chr17	+	3309	21	FSM	ENSG00000126858.19	ENST00000358365.7	3297	21	-12	0	0	0	multi-exon	FALSE	canonical	3	16	junction_19	104.534731070587	1996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTTCTTTTGTCATC	NA	False	NA	10	True	AATAAA	-20	NA	32142453	32225727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_32142730_32171042_32171102_32173830_32173913_32175318_32175363_32175961_32176016_32176160_32176214_32182756_32182866_32183170_32183273_32192200_32192300_32193135_32193245_32193986_32194108_32198946_32199032_32199404_32199551_32200955_32201057_32202769_32202901_32203889_32203974_32206909_32207030_32208106_32208310_32209349_32209446_32211115_32211239_32224615
H1_mix_00038789	chr17	+	3202	20	NIC	ENSG00000126858.19	novel	3297	21	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_18	122.491811021443	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTTCTTTTGTCATC	4	True	NA	10	True	AATAAA	-20	NA	32142501	32225727	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_32142730_32173830_32173913_32175318_32175363_32175961_32176016_32176160_32176214_32182756_32182866_32183170_32183273_32192200_32192300_32193135_32193245_32193986_32194108_32198946_32199032_32199404_32199551_32200955_32201057_32202769_32202901_32203889_32203974_32206909_32207030_32208106_32208310_32209349_32209446_32211115_32211239_32224615
H1_mix_00038790	chr17	+	2828	18	NIC	ENSG00000126858.19	novel	3133	19	NA	NA	0	-11	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	89.5224160519506	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATGATAAACCTATTTTT	13	False	NA	13	True	AATAAA	-18	NA	32142559	32225655	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_32142730_32171042_32171102_32173830_32173913_32175318_32175363_32175961_32176016_32176160_32176214_32182756_32182866_32183170_32183273_32192200_32192300_32193135_32193245_32193986_32194108_32198946_32199032_32199404_32199551_32200955_32201057_32202769_32202901_32206909_32207030_32208106_32208310_32224615
H1_mix_00038792	chr17	+	2967	20	FSM	ENSG00000126858.19	ENST00000394692.6	2960	20	-7	0	0	0	multi-exon	FALSE	canonical	3	70	junction_19	83.5223857397979	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTTCTTTTGTCATC	95	False	NA	10	True	AATAAA	-20	NA	32142672	32225727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_32142730_32171042_32171102_32173830_32173913_32175318_32175363_32175961_32176016_32176160_32176214_32182756_32182866_32183170_32183273_32192200_32192300_32193135_32193245_32193986_32194108_32198946_32199032_32199404_32199551_32200955_32201057_32202769_32202901_32203889_32203974_32206909_32207030_32208106_32208310_32209349_32209446_32224615
H1_mix_00038794	chr17	+	4783	7	Fusion	ENSG00000265794.5_ENSG00000141314.13	novel	1338	8	NA	NA	-17	0	multi-exon	FALSE	canonical	0	0	junction_2	33.6571768803558	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCATTGGTTATTCAGG	NA	False	NA	18	True	ATTAAA	-18	NA	32265814	32324656	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr17_+_32266301_32288791_32289017_32294344_32294443_32298091_32298205_32305340_32305442_32316231_32316293_32320957
H1_mix_00038796	chr17	+	1248	6	FSM	ENSG00000141314.13	ENST00000582967.1	1246	6	-2	0	-2	0	multi-exon	FALSE	canonical	0	0	junction_2	31.6455368101096	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGCCCTTATCTGTAGT	NA	False	NA	NA	False	NA	NA	NA	32284149	32316274	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_32284818_32288791_32289017_32294344_32294443_32298091_32298205_32305340_32305442_32316231
H1_mix_00038798	chr17	+	368	1	FSM	ENSG00000274341.1	ENST00000620729.1	297	1	-63	-8	-63	8	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGTTTCTATTGCTTTT	NA	False	NA	2	True	AATAAA	-5	NA	32407949	32408317	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_32407900_32408300
H1_mix_00038799	chr17	+	3317	14	FSM	ENSG00000108671.11	ENST00000649012.1	3317	14	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_13	561.412620251375	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAATATATTATTAAAA	NA	False	NA	NA	False	NA	NA	NA	32444460	32483295	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_32444615_32446944_32447047_32454494_32454620_32464048_32464121_32464520_32464579_32468998_32469194_32473800_32473946_32474763_32474825_32477520_32477584_32479250_32479377_32479850_32479887_32480145_32480198_32480488_32480632_32481310
H1_mix_00038802	chr17	+	282	1	FSM	ENSG00000265689.1	ENST00000577584.1	372	1	47	43	47	-43	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCAGTTGAAAGACAATAT	NA	False	NA	NA	False	NA	NA	NA	33688849	33689131	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_33688800_33689100
H1_mix_00038803	chr17	+	456	1	FSM	ENSG00000283381.1	ENST00000637860.1	256	1	-202	2	-202	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGTTATAAAAGTCTTGAA	NA	False	NA	NA	False	NA	NA	NA	33692026	33692482	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_33692000_33692500
H1_mix_00038813	chr17	+	1190	3	FSM	ENSG00000267364.3	ENST00000662865.1	1219	3	29	0	1	0	multi-exon	FALSE	canonical	2	4	junction_1	4.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGGTTATTTCCAGGT	-11	True	NA	20	True	AATATA	-31	NA	35313507	35325448	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_35313707_35323147_35323344_35324653
H1_mix_00038817	chr17	+	851	5	FSM	ENSG00000273611.5	ENST00000620324.4	834	5	-17	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	313.088246345978	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGGGTTAGGGATGGATC	-7	True	NA	36	True	NA	NA	NA	36486677	36498148	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_36486786_36486934_36486967_36492812_36492900_36493925_36494007_36497605
H1_mix_00038822	chr17	+	1357	6	NIC	ENSG00000278535.5	novel	1515	7	NA	NA	13	-5	combination_of_known_junctions	FALSE	canonical	3	45	junction_4	134.59123299829	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAATCGCAACCAATCTG	42	False	NA	0	True	ATTAAA	-4	NA	36591927	36600788	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_36592157_36594970_36595181_36598162_36598258_36598920_36599051_36599971_36600038_36600161
H1_mix_00038823	chr17	+	3838	4	FSM	ENSG00000278535.5	ENST00000621871.1	883	4	-2955	0	624	0	multi-exon	FALSE	canonical	3	45	junction_2	164.574198058707	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGTGGATTTCATGGTG	3325	False	NA	-32	True	NA	NA	NA	36595210	36600756	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_36598258_36598920_36599051_36599971_36600038_36600161
H1_mix_00038824	chr17	+	578	1	FSM	ENSG00000275720.1	ENST00000618067.1	630	1	44	8	44	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCAAATTACTGTTGTTA	NA	False	NA	NA	False	AATAAA	-17	NA	36634112	36634690	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_36634100_36634700
H1_mix_00038825	chr17	+	3633	5	NIC	ENSG00000273706.5	novel	3425	5	NA	NA	-91	-6	intron_retention	FALSE	canonical	0	0	junction_2	27.3986769753578	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTAGATAATTGGTGTGT	429	False	NA	14	True	AATAAA	-34	NA	36937218	36944606	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_36938368_36940289_36940517_36940651_36940888_36942199_36942366_36942751
H1_mix_00038827	chr17	+	1963	11	FSM	ENSG00000275700.6	ENST00000680579.1	1963	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	253.147407650167	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTACCGCCACCACCGC	6718	False	NA	5	True	AATAAA	-5	NA	36948924	37056858	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_36949217_36950213_36950406_36952885_36953297_36953769_36953908_36988518_36988721_36989246_36989412_36990773_36990858_37019004_37019073_37020933_37021015_37031613_37031686_37056600
H1_mix_00038829	chr17	+	328	2	NNC	ENSG00000275700.6	novel	2446	13	NA	NA	-207	-29	at_least_one_novel_splicesite	FALSE	canonical	2	46	junction_1	0	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGTCCCGCCCAACCCCG	1517	False	NA	-40	True	AATACA	-9	NA	37054257	37056813	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_37054373_37056600
H1_mix_00038831	chr17	+	526	5	ISM	ENSG00000274419.6	ENST00000616101.4	2116	14	4192	3376	4192	-3376	internal_fragment	FALSE	canonical	2	6	junction_2	14.5	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTATGGTCCCCTCAG	NA	False	NA	NA	False	NA	NA	NA	38008167	38011526	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_38008318_38008646_38008757_38010004_38010054_38010596_38010718_38011430
H1_mix_00038833	chr17	+	1130	9	NNC	ENSG00000274615.1	novel	1300	11	NA	NA	33154	-3	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_3	124.522086394342	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTCAGGTTGAATATCT	NA	False	NA	NA	False	AATAAA	-22	NA	38111415	38124767	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_38111523_38114778_38114887_38117539_38117741_38118186_38118284_38118407_38118442_38119292_38119408_38122799_38122965_38124038_38124144_38124569
H1_mix_00038834	chr17	+	3482	5	NIC	ENSG00000274615.1	novel	1300	11	NA	NA	35471	-11	intron_retention	FALSE	canonical	3	202	junction_2	108.711774891223	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAAGCTGTGTTCAGGTT	NA	False	NA	NA	False	AATAAA	-14	NA	38113732	38124759	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_38114887_38117539_38119408_38122799_38122965_38124038_38124144_38124569
H1_mix_00038835	chr17	+	6148	25	NIC	ENSG00000275832.5	novel	769	8	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_12	40.8577308066254	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGAGTCAGCTGTCTCA	1	True	NA	28	True	AATAAA	-14	NA	38453696	38512385	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_38454141_38458101_38458264_38460904_38460933_38462845_38462942_38463117_38463197_38463327_38463383_38466166_38467332_38469143_38469300_38469523_38469636_38469846_38469905_38471862_38472007_38477578_38477706_38477827_38477897_38479435_38479498_38479752_38479884_38482021_38482144_38482522_38482679_38486061_38486141_38490101_38490176_38490461_38490552_38491406_38491533_38497784_38497827_38498413_38498511_38500596_38500629_38509943
H1_mix_00038836	chr17	+	6044	24	NIC	ENSG00000275832.5	novel	769	8	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_11	41.1790777716641	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGAGTCAGCTGTCTCA	0	True	NA	28	True	AATAAA	-14	NA	38453673	38512385	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_38454141_38458101_38458264_38460904_38460933_38462845_38462942_38463117_38463197_38463327_38463383_38466166_38467332_38469143_38469300_38469523_38469636_38469846_38469905_38471862_38472007_38477827_38477897_38479435_38479498_38479752_38479884_38482021_38482144_38482522_38482679_38486061_38486141_38490101_38490176_38490461_38490552_38491406_38491533_38497784_38497827_38498413_38498511_38500596_38500629_38509943
H1_mix_00038837	chr17	+	885	7	FSM	ENSG00000275832.5	ENST00000618942.1	969	7	84	0	84	0	multi-exon	FALSE	canonical	2	4	junction_1	50.1752484354144	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCCCGGGCCTCCACC	3599	False	NA	NA	False	NA	NA	NA	38457483	38466272	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_38457843_38458101_38458264_38460904_38460933_38462845_38462942_38463117_38463197_38463327_38463383_38466166
H1_mix_00038839	chr17	+	407	5	FSM	ENSG00000275832.5	ENST00000620329.1	407	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	66.8599282081577	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGACGACGACTCGGAGCA	NA	False	NA	NA	False	GGGGCT	-11	NA	38490461	38510060	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_38490552_38491406_38491533_38497784_38497827_38500596_38500629_38509943
H1_mix_00038840	chr17	+	2146	1	Intergenic	novelGene_556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGGTGTATGCCTGTA	4582	False	NA	NA	False	AATACA	-14	NA	38504987	38507133	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_38505000_38507100
H1_mix_00038841	chr17	+	4244	1	FSM	ENSG00000275023.5	ENST00000615741.1	2937	1	1301	-2608	-200	5	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCCCCTGCGTAGTCTCG	8019	False	NA	NA	False	AATAAA	-35	NA	38725556	38729800	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_38725600_38729800
H1_mix_00038844	chr17	+	4023	6	FSM	ENSG00000002834.18	ENST00000433206.6	4023	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	240.298481060534	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGTTTCCTCTCTGGCT	-3	True	NA	26	True	AATAAA	-21	NA	38869858	38921769	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_38870259_38878085_38878181_38898411_38898520_38914324_38914476_38915042_38915147_38918604
H1_mix_00038845	chr17	+	2970	3	FSM	ENSG00000108298.12	ENST00000678791.1	2970	3	0	0	0	0	multi-exon	FALSE	canonical	3	13054	junction_2	712.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACAAGCCTTAATCTGC	61	False	NA	54	True	ATTAAA	-2	NA	39200433	39204707	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39203110_39204076_39204188_39204524
H1_mix_00038847	chr17	+	4165	13	FSM	ENSG00000167258.15	ENST00000584632.5	4165	13	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	21.077238908358	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCTGACATGCAGAATATA	16	True	NA	NA	False	NA	NA	NA	39461510	39526163	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39463118_39470881_39471764_39490556_39490734_39492750_39492891_39494523_39494695_39501249_39501440_39509704_39509762_39511528_39511631_39515730_39515809_39517439_39517557_39519955_39520088_39524673_39524886_39525863
H1_mix_00038849	chr17	+	683	1	FSM	ENSG00000167258.15	ENST00000585161.1	2036	1	1372	-19	122	19	mono-exon	FALSE	NA	NA	NA	NA	NA	216	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAACTTGGAGCTCATCTT	NA	False	NA	NA	False	NA	NA	NA	39550312	39550995	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39550300_39551000
H1_mix_00038851	chr17	+	554	4	FSM	ENSG00000131748.16	ENST00000580551.5	554	4	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_1	6.16441400296898	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGGGCTGGTGGAAGGGA	-14	True	NA	NA	False	NA	NA	NA	39637138	39657887	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39637232_39653480_39653751_39657007_39657086_39657774
H1_mix_00038852	chr17	+	1668	15	FSM	ENSG00000131748.16	ENST00000544210.6	1666	15	-2	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	123.627567759801	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCACTGGCTGGAGGAAGT	-14	True	NA	NA	False	NA	NA	NA	39637138	39663094	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39637232_39653480_39653751_39657007_39657086_39657774_39657840_39657972_39658027_39658404_39658523_39658708_39658821_39659050_39659107_39659460_39659554_39660210_39660274_39660430_39660527_39660809_39660890_39660980_39661086_39662250_39662345_39662803
H1_mix_00038853	chr17	+	1954	14	FSM	ENSG00000131748.16	ENST00000394250.8	1949	14	-5	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	100.81044371557	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTTTGTATTAAGCCAAT	-14	True	NA	-18	True	NA	NA	NA	39637138	39663434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39637232_39653480_39653751_39657007_39657086_39657774_39657853_39658404_39658523_39658721_39658821_39659050_39659107_39659460_39659554_39660210_39660274_39660430_39660527_39660809_39660890_39660980_39661086_39662250_39662345_39662803
H1_mix_00038857	chr17	+	960	2	FSM	ENSG00000173991.6	ENST00000309889.3	960	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	151	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCATCTCTTTCCTTGTG	0	True	NA	15	True	AATAAA	-20	NA	39665348	39666554	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39665470_39665715
H1_mix_00038858	chr17	+	4796	31	FSM	ENSG00000141736.14	ENST00000584601.5	4792	31	-4	0	-4	0	multi-exon	TRUE	canonical	3	8	junction_4	566.099398417706	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGAAGCTGGCCTGAGAGG	NA	False	NA	NA	False	NA	NA	NA	39687909	39728361	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39688279_39688695_39688801_39693260_39693326_39694987_39695182_39699536_39699588_39706989_39707142_39708320_39708535_39709317_39709453_39709812_39709882_39710085_39710202_39710339_39710482_39711927_39712048_39712321_39712449_39715285_39715360_39715445_39715537_39715739_39715940_39716300_39716434_39716514_39716606_39717319_39717481_39719786_39719835_39723318_39723458_39723537_39723661_39723911_39724011_39724725_39724912_39725048_39725205_39725326_39725403_39725706_39725854_39726561_39726660_39726814_39727004_39727294_39727548_39727688
H1_mix_00038859	chr17	+	2367	18	FSM	ENSG00000141736.14	ENST00000578199.5	2526	18	-18	177	0	-175	multi-exon	FALSE	canonical	3	13	junction_3	578.435606498296	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCCAACGGTCTTTTC	6	True	NA	NA	False	NA	NA	NA	39688100	39717480	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39688279_39688695_39688801_39693260_39693326_39694987_39695182_39706989_39707142_39708320_39708535_39709317_39709453_39709812_39709882_39710085_39710202_39710339_39710482_39711927_39712048_39712321_39712449_39715285_39715360_39715445_39715537_39715739_39715940_39716300_39716434_39716514_39716606_39717319
H1_mix_00038863	chr17	+	2632	14	ISM	ENSG00000141738.14	ENST00000394211.7	2093	15	9	0	-7	0	intron_retention	FALSE	canonical	3	100	junction_1	29.4353167100761	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGAGTTCTGTCTGGCA	6	True	NA	24	True	AATAAA	-18	NA	39738345	39747285	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_39738393_39742251_39742457_39742565_39742717_39742897_39743055_39743179_39743302_39743392_39743471_39744069_39744208_39744552_39744664_39744885_39744985_39745242_39745324_39745421_39745539_39745727_39745789_39745912_39746001_39746108
H1_mix_00038864	chr17	+	1935	14	NNC	ENSG00000141738.14	novel	2233	15	NA	NA	99	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	51.3308101534149	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGAGTTCTGTCTGGCA	2289	False	NA	24	True	AATAAA	-18	NA	39742350	39747285	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_39742457_39742565_39742717_39742897_39743055_39743179_39743302_39743392_39743471_39744069_39744208_39744552_39744664_39744885_39744985_39745242_39745324_39745421_39745539_39745730_39745789_39745912_39746001_39746108_39746203_39746750
H1_mix_00038865	chr17	+	580	3	FSM	ENSG00000108344.15	ENST00000580980.1	580	3	0	0	0	0	multi-exon	FALSE	canonical	3	923	junction_1	5	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCGCAAGGCCCCTCAGCA	5838	False	NA	NA	False	NA	NA	NA	39986683	39990152	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39986713_39988682_39988820_39989738
H1_mix_00038867	chr17	+	3424	6	FSM	ENSG00000188895.12	ENST00000339569.9	3424	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	9.04212364436585	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTGAACTTCTGCTTC	85	False	NA	28	True	AATAAA	-15	NA	40131000	40136787	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_40131585_40132033_40132099_40133041_40133110_40133533_40133659_40133826_40133900_40134278
H1_mix_00038868	chr17	+	572	4	FSM	ENSG00000188895.12	ENST00000583127.1	572	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	4.32049379893857	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAACTCCACAGTAAGTA	864	False	NA	NA	False	NA	NA	NA	40131779	40133886	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_40132099_40133041_40133110_40133533_40133659_40133826
H1_mix_00038869	chr17	+	2006	8	FSM	ENSG00000108349.17	ENST00000418132.7	1986	8	-20	0	-20	0	multi-exon	FALSE	canonical	3	538	junction_5	45.976480233853	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCCGAGTAGCTGGCATT	2	True	NA	NA	False	NA	NA	NA	40140297	40167080	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_40140780_40141206_40141235_40141569_40141608_40161752_40161912_40162001_40162154_40162724_40162902_40163480_40164167_40166796
H1_mix_00038874	chr17	+	382	4	FSM	ENSG00000108352.13	ENST00000541245.1	382	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	18.1903515328563	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTGCTTCAAGAGGAAGAG	335	False	NA	NA	False	NA	NA	NA	40178248	40184308	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_40178382_40181298_40181374_40181615_40181695_40184213
H1_mix_00038875	chr17	+	779	4	FSM	ENSG00000108352.13	ENST00000538981.1	779	4	0	0	0	0	multi-exon	FALSE	non_canonical	3	30	junction_3	4.18993502999218	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTTCCGGGGCTCTGAT	3325	False	NA	NA	False	NA	NA	NA	40181238	40188954	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_40181695_40184213_40184350_40184580_40184679_40188865
H1_mix_00038876	chr17	+	3409	11	FSM	ENSG00000108352.13	ENST00000545893.5	1527	11	-63	-1819	-63	0	multi-exon	FALSE	canonical	3	29	junction_2	11.2320968656792	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGTTGTTCTCCATT	78	False	NA	14	True	GATAAA	-14	NA	40188474	40195650	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_40188979_40189207_40189376_40190433_40190532_40190639_40190763_40191315_40191495_40191581_40191673_40192212_40192264_40192605_40192694_40192925_40192991_40193362_40193418_40193663
H1_mix_00038877	chr17	+	5957	8	FSM	ENSG00000171475.14	ENST00000583130.5	1529	8	29	-4457	29	-1448	multi-exon	FALSE	canonical	1	2	junction_1	25.5382865837286	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTGAAAATTGTGTACT	-5	True	NA	NA	False	ATTAAA	-17	NA	40219818	40282688	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_40219921_40256390_40256523_40260534_40260668_40262524_40262642_40264489_40265147_40273789_40274000_40277082_40277185_40278184
H1_mix_00038878	chr17	+	719	4	FSM	ENSG00000094804.12	ENST00000580824.5	696	4	-23	0	0	0	multi-exon	FALSE	canonical	2	19	junction_1	387.066172924246	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATTTCTTGAGGGAACAC	-24	True	NA	NA	False	NA	NA	NA	40287878	40291555	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_40288038_40289407_40289599_40291057_40291340_40291468
H1_mix_00038879	chr17	+	541	3	FSM	ENSG00000094804.12	ENST00000577249.1	541	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	404.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGACAATTAAGTCTCCTA	4	True	NA	NA	False	NA	NA	NA	40287906	40291181	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_40288133_40289407_40289599_40291057
H1_mix_00038880	chr17	+	1795	2	FSM	ENSG00000094804.12	ENST00000648633.1	739	2	-83	-973	-83	668	multi-exon	FALSE	canonical	3	688	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTCAAGTTGCATTCTT	NA	False	NA	9	True	AATATA	-3	NA	40300806	40302904	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_40301609_40301911
H1_mix_00038881	chr17	+	2482	9	FSM	ENSG00000131759.18	ENST00000394089.6	2024	9	6	-464	2	0	multi-exon	FALSE	canonical	3	28	junction_1	15.1801679832603	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATACTGAAGGAATTTG	20	True	NA	26	True	NA	NA	NA	40318286	40356795	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_40318449_40330856_40331397_40348315_40348465_40349783_40349926_40351909_40352071_40352330_40352508_40354301_40354507_40355262_40355422_40356008
H1_mix_00038882	chr17	+	2603	4	FSM	ENSG00000173786.17	ENST00000393888.1	2583	4	-20	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	186.541029147894	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCAGTCTCTCTTACC	-1	True	NA	17	True	AATAAA	-17	NA	41966794	41975176	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_41966888_41968072_41968741_41971891_41972032_41973474
H1_mix_00038883	chr17	+	1517	1	FSM	ENSG00000173786.17	ENST00000592861.1	1517	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGAGTGTTTTGCGCTGGGC	1700	False	NA	NA	False	AATGAA	-40	NA	41970280	41971797	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_41970300_41971800
H1_mix_00038884	chr17	+	911	2	FSM	ENSG00000173786.17	ENST00000486438.1	911	2	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGGGAAACGTGCCCTCT	3028	False	NA	NA	False	NA	NA	NA	41971608	41973962	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_41972032_41973474
H1_mix_00038885	chr17	+	2547	4	FSM	ENSG00000168256.18	ENST00000393880.5	1644	4	-36	-867	-11	0	multi-exon	FALSE	canonical	3	16	junction_1	143.208472747483	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCCCTCCCCTCCCCCTT	2581	False	NA	20	True	AATAAA	-21	NA	42020060	42025641	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42020270_42021563_42021672_42022398_42022641_42023653
H1_mix_00038886	chr17	+	1195	1	FSM	ENSG00000260325.2	ENST00000565659.2	549	1	-527	-119	-527	119	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCACTTGAGGCCAGGAG	9410	False	NA	NA	False	NA	NA	NA	42122276	42123471	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42122300_42123500
H1_mix_00038887	chr17	+	3873	20	NIC	ENSG00000033627.17	novel	4106	22	NA	NA	13	-2	combination_of_known_junctions	FALSE	canonical	3	41	junction_19	56.4849893035353	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGAGAAGCTGCCTGTCACT	18	True	NA	17	True	AATAAA	-17	NA	42458916	42522575	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_42458964_42460847_42461012_42466428_42466508_42468009_42468108_42470089_42470219_42477659_42477743_42478462_42478590_42480666_42480750_42483037_42483132_42487154_42487368_42490486_42490638_42494333_42494474_42495033_42495189_42495625_42495717_42498923_42499043_42500706_42500924_42501196_42501305_42507519_42507628_42513860_42513979_42521026
H1_mix_00038889	chr17	+	4652	1	FSM	ENSG00000033627.17	ENST00000592831.1	4652	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCTGCCTGTCACTGTG	3571	False	NA	20	True	AATAAA	-20	NA	42517926	42522578	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42517900_42522600
H1_mix_00038890	chr17	+	2960	4	NIC	ENSG00000108784.10	novel	2475	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	47	junction_3	58.6571962052966	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGAGTCCCCTGGGTCT	-11	True	NA	24	True	ATTAAA	-24	NA	42536240	42544449	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_42537546_42538338_42538486_42538669_42538756_42543027
H1_mix_00038891	chr17	+	510	4	FSM	ENSG00000108784.10	ENST00000586516.5	510	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	64.3393779543722	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCACAGACCACATCTATG	271	False	NA	NA	False	NA	NA	NA	42536522	42541093	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42536656_42538338_42538486_42538669_42538756_42540949
H1_mix_00038893	chr17	+	721	2	ISM	ENSG00000108786.11	ENST00000225929.5	1265	6	1470	3	1470	-3	3prime_fragment	FALSE	canonical	3	29	junction_1	0	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGCACAGTGGCACCATT	754	False	NA	5	True	AATAAA	-13	NA	42554403	42555210	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_42554583_42554668
H1_mix_00038896	chr17	+	2543	10	Fusion	ENSG00000266929.1_ENSG00000068120.15	novel	2071	10	NA	NA	-191	0	multi-exon	FALSE	canonical	3	74	junction_1	141.657472468532	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGAATGTTCTGAGATGT	8293	False	NA	0	True	NA	NA	NA	42561942	42566260	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr17_+_42562488_42562611_42563323_42563960_42564176_42564445_42564578_42564708_42564899_42564982_42565048_42565226_42565312_42565470_42565569_42565658_42565806_42565905
H1_mix_00038899	chr17	+	2225	7	FSM	ENSG00000068120.15	ENST00000591753.1	2225	7	0	0	0	0	multi-exon	FALSE	canonical	3	512	junction_3	11.5566238822398	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTTGCTTGTATGGTGT	264	False	NA	14	True	ATTAAA	-14	NA	42563306	42566274	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42564578_42564708_42564899_42564982_42565048_42565226_42565312_42565470_42565569_42565658_42565806_42565905
H1_mix_00038901	chr17	+	716	2	FSM	ENSG00000068120.15	ENST00000591583.1	716	2	0	0	0	0	multi-exon	FALSE	canonical	3	522	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTGTATGGTGTCTG	2419	False	NA	17	True	ATTAAA	-17	NA	42565461	42566277	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42565806_42565905
H1_mix_00038902	chr17	+	2484	6	FSM	ENSG00000108788.12	ENST00000590050.5	2537	6	28	25	0	11	multi-exon	FALSE	canonical	0	0	junction_1	179.391192648915	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGTCAGTTTATGATAT	-4	True	NA	21	True	AATAAA	-34	NA	42567099	42573214	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42567167_42567618_42567656_42568836_42568944_42569203_42569607_42569981_42570184_42571546
H1_mix_00038906	chr17	+	3289	9	FSM	ENSG00000131462.9	ENST00000681114.1	3289	9	0	0	0	0	multi-exon	FALSE	canonical	3	1361	junction_6	105.746084442877	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATAAATCAAGTCACTGC	48	False	NA	3	True	AATAAA	-7	NA	42609734	42615226	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42609787_42610107_42610221_42610422_42612144_42612426_42612507_42612946_42613074_42613646_42613734_42613848_42614413_42614495_42614658_42614843
H1_mix_00038909	chr17	+	3209	8	ISM	ENSG00000108797.12	ENST00000264638.9	5537	24	9461	6	2214	-6	3prime_fragment	FALSE	canonical	3	12	junction_5	2.65729646253404	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAGTCTGTGTGTGGTA	9256	False	NA	23	True	AATAAA	-14	NA	42691991	42699987	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_42692721_42693296_42693537_42695520_42695875_42696024_42696153_42697273_42697368_42697553_42697800_42697902_42697951_42698617
H1_mix_00038910	chr17	+	570	5	FSM	ENSG00000131467.12	ENST00000592578.5	549	5	-21	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	858.226368739623	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCACTCTGACATGAATCT	-29	True	NA	NA	False	NA	NA	NA	42833396	42834804	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42833674_42833775_42833940_42834343_42834377_42834514_42834578_42834771
H1_mix_00038912	chr17	+	582	8	FSM	ENSG00000131467.12	ENST00000586114.5	580	8	-2	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	576.54661563485	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATCTTATCTGGACCAGA	-29	True	NA	NA	False	NA	NA	NA	42833396	42838985	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42833506_42834343_42834377_42834514_42834578_42834771_42834877_42837648_42837698_42838092_42838206_42838730_42838800_42838944
H1_mix_00038913	chr17	+	1040	8	FSM	ENSG00000131467.12	ENST00000591152.5	1018	8	-22	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	577.224569887347	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTAGGGCTGCTTGGGCT	-29	True	NA	NA	False	NA	NA	NA	42833396	42839009	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42833940_42834343_42834377_42834514_42834578_42834771_42834877_42837648_42837698_42838092_42838206_42838730_42838800_42838944
H1_mix_00038915	chr17	+	964	10	FSM	ENSG00000131467.12	ENST00000543428.5	956	10	-8	0	0	0	multi-exon	FALSE	canonical	2	16	junction_5	540.738886348926	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAGTTAGAGTCTAATG	11	True	NA	-14	True	NA	NA	NA	42833436	42841695	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42833674_42834343_42834377_42834514_42834578_42834771_42834877_42837648_42837698_42838730_42838800_42838944_42839013_42839111_42839167_42839293_42839381_42841497
H1_mix_00038916	chr17	+	3144	11	FSM	ENSG00000131467.12	ENST00000293362.7	3144	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	516.524355669701	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTAGCCTTCTGGTTTCC	45	False	NA	13	True	AATAAA	-22	NA	42833470	42843757	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42833674_42834343_42834377_42834514_42834578_42834771_42834877_42837648_42837698_42838092_42838206_42838691_42838800_42838944_42839013_42839111_42839167_42839293_42839381_42841497
H1_mix_00038919	chr17	+	2059	3	ISM	ENSG00000131480.9	ENST00000253799.8	2677	4	3486	3	3465	0	3prime_fragment	FALSE	canonical	3	33	junction_1	19	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTTACTTGAATTTATT	1879	False	NA	NA	False	AATAAA	-12	NA	42848065	42850704	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_42849372_42849600_42849731_42850081
H1_mix_00038924	chr17	+	1866	3	FSM	ENSG00000198496.12	ENST00000657841.1	1895	3	29	0	29	0	multi-exon	FALSE	canonical	3	7	junction_2	2.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGATCCTCCTCAATCC	-17	True	NA	-14	True	NA	NA	NA	43125579	43153649	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_43125771_43138656_43140284_43153601
H1_mix_00038926	chr17	+	599	3	FSM	ENSG00000188554.15	ENST00000586650.5	586	3	-13	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	87	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATTCAAATAAAATACCTG	-34	True	NA	NA	False	TTTAAA	-44	NA	43170480	43177960	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_43170944_43175790_43175902_43177935
H1_mix_00038928	chr17	+	2752	17	NNC	ENSG00000188554.15	novel	4613	21	NA	NA	-8	4646	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	52.2924468733296	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGATTCTGGATTTAA	24	False	NA	10	True	AATAAA	-18	NA	43171234	43200766	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_43171303_43175790_43175902_43177935_43177999_43179393_43179413_43180794_43180818_43186200_43186445_43189041_43189120_43189587_43189803_43190608_43190777_43191371_43191582_43193093_43193254_43193347_43193639_43194349_43194500_43194963_43195040_43196480_43196592_43196941_43197107_43200166
H1_mix_00038929	chr17	+	1373	3	Intergenic	novelGene_564	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	10.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCAGTTGTTTCTTTTTA	2118	False	NA	NA	False	AATAAA	-14	NA	43401219	43408619	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_43401322_43402583_43402707_43407471
H1_mix_00038930	chr17	+	565	4	FSM	ENSG00000067596.12	ENST00000592258.5	590	4	25	0	25	0	multi-exon	FALSE	canonical	2	7	junction_1	95.3950848955135	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCCTTAGTGTCCTGT	5	False	NA	NA	False	NA	NA	NA	43483889	43492292	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_43484186_43490390_43490464_43491164_43491251_43492182
H1_mix_00038931	chr17	+	6209	19	FSM	ENSG00000067596.12	ENST00000587044.1	6215	19	0	6	0	4	multi-exon	FALSE	canonical	3	17	junction_18	48.3319603891848	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTTTTAAAATTTTGTT	7205	False	NA	15	True	ATTAAA	-17	NA	43491193	43526790	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_43491251_43492182_43492293_43492680_43493041_43493444_43493590_43493682_43493887_43496180_43496269_43498861_43498960_43499955_43500104_43504643_43504826_43507002_43507198_43507502_43507689_43507808_43508020_43508338_43508521_43513361_43513503_43517166_43520268_43520750_43520880_43521368_43521566_43522046_43522227_43526495
H1_mix_00038933	chr17	+	2360	1	FSM	ENSG00000141349.9	ENST00000585962.1	3027	1	715	-48	461	48	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAAACCATGGCAAGGTA	724	False	NA	NA	False	AAAAAG	-38	NA	44071627	44073987	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_44071600_44074000
H1_mix_00038934	chr17	+	2783	10	FSM	ENSG00000125319.15	ENST00000319977.8	2725	10	-58	0	-58	0	multi-exon	TRUE	canonical	2	5	junction_5	38.746405647715	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTCCCTTTCTTTT	NA	False	NA	14	True	AATAAA	-14	NA	44141847	44162476	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_44142146_44145202_44145254_44147857_44149028_44150960_44151045_44152636_44152778_44154552_44154665_44154852_44154939_44155285_44155412_44157832_44157942_44161870
H1_mix_00038935	chr17	+	2272	7	FSM	ENSG00000125319.15	ENST00000245382.6	2272	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	49.6770123453047	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTCCCTTTCTTTT	-14	True	NA	14	True	AATAAA	-14	NA	44142021	44162476	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_44142146_44145202_44145254_44147857_44149028_44154555_44154665_44154852_44154939_44155285_44155412_44161870
H1_mix_00038937	chr17	+	2621	3	FSM	ENSG00000168591.16	ENST00000319511.6	2418	3	-218	15	2	0	multi-exon	FALSE	canonical	3	37	junction_1	38.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATTTTGTGGTCCTGCA	6	True	NA	-4	True	AATAAA	-2	NA	44186987	44191711	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_44187744_44188934_44189589_44190500
H1_mix_00038939	chr17	+	2486	4	NIC	ENSG00000168591.16	novel	1580	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	43	junction_1	33.008416435139	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTCTGTGACTGAATAAAG	-29	True	NA	-24	True	GGGGCT	-13	NA	44187205	44191691	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_44187744_44187906_44188010_44188934_44189589_44190500
H1_mix_00038940	chr17	+	1850	3	FSM	ENSG00000168591.16	ENST00000589184.5	1837	3	-13	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	14.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATTTTGTGGTCCTGCA	27	True	NA	-4	True	AATAAA	-2	NA	44187261	44191711	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_44187744_44188934_44189092_44190500
H1_mix_00038941	chr17	+	1995	7	NIC	ENSG00000168591.16	novel	546	5	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	38.9761322977138	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTTTCTGTGACAGAGA	44	True	NA	16	True	AATAAA	-22	NA	44187278	44191731	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_44187744_44187906_44188010_44188934_44189092_44189206_44189300_44189423_44189589_44190500_44190887_44191105
H1_mix_00038943	chr17	+	2046	1	FSM	ENSG00000260793.3	ENST00000563394.1	1796	1	-268	18	246	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACATGAATCATAAGAATG	220	False	NA	-3	True	AATAAA	-8	NA	44221646	44223692	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_44221600_44223700
H1_mix_00038945	chr17	+	1056	2	FSM	ENSG00000108309.14	ENST00000588564.1	746	2	-313	3	-313	-2	multi-exon	FALSE	canonical	3	17	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGGCAGCCTTGTATGTG	1055	False	NA	10	True	AATAAA	-12	NA	44316241	44318667	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_44316726_44318095
H1_mix_00038946	chr17	+	545	6	FSM	ENSG00000030582.18	ENST00000587518.5	526	6	-19	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	514.022178509838	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACGTGCTGTGTTATGGTC	NA	False	NA	NA	False	NA	NA	NA	44345245	44350287	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_44345335_44345565_44345606_44349157_44349303_44349425_44349552_44349666_44349752_44350227
H1_mix_00038947	chr17	+	587	2	FSM	ENSG00000030582.18	ENST00000585348.1	600	2	13	0	13	0	multi-exon	FALSE	canonical	3	1022	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACGCAGAAGGGTACCT	234	False	NA	NA	False	NA	NA	NA	44350923	44351599	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_44351461_44351549
H1_mix_00038948	chr17	+	3309	12	NIC	ENSG00000161692.18	novel	3015	14	NA	NA	4	302	combination_of_known_splicesites	FALSE	canonical	3	11	junction_9	17.5969569119772	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAAGAGATGGGGCTGGA	14	True	NA	9	True	AATAAA	-17	NA	44708659	44750541	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_44708840_44709303_44709367_44722879_44723023_44729904_44730097_44730964_44731016_44732177_44732266_44734089_44734164_44736829_44736867_44738378_44738425_44747082_44747192_44747390_44747516_44748340
H1_mix_00038953	chr17	+	904	4	FSM	ENSG00000167131.17	ENST00000410006.6	921	4	17	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	9.0921211313239	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTCTGCAGGACCATAATA	8	True	NA	NA	False	NA	NA	NA	44899728	44902882	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_44899830_44900989_44901142_44901519_44901653_44902364
H1_mix_00038957	chr17	+	6461	10	FSM	ENSG00000136448.13	ENST00000587014.2	6456	10	-5	0	-2	0	multi-exon	FALSE	canonical	3	593	junction_5	20.9254998317812	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATCTCACTTGTTTCTAA	-16	True	NA	NA	False	NA	NA	NA	45061298	45108974	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_45061461_45081643_45081753_45086507_45086653_45093684_45093804_45096193_45096286_45097127_45097245_45098381_45098553_45099404_45099514_45102950_45103122_45103708
H1_mix_00038960	chr17	+	1983	9	FSM	ENSG00000181513.15	ENST00000398322.7	1986	9	0	3	0	2	multi-exon	FALSE	canonical	3	22	junction_5	10.8512672071054	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTGTCTGGTCCCCTA	8	True	NA	14	True	AATAAA	-15	NA	45135686	45144178	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_45136233_45136499_45136621_45136691_45136777_45137018_45137140_45137367_45137455_45137759_45137831_45137912_45137989_45139020_45139161_45143442
H1_mix_00038961	chr17	+	804	4	FSM	ENSG00000181513.15	ENST00000589752.5	804	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	6.18241233033047	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGATATCTCTAGTGCCT	417	False	NA	NA	False	NA	NA	NA	45136095	45137636	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_45136233_45136499_45136777_45137018_45137140_45137367
H1_mix_00038963	chr17	+	1345	3	FSM	ENSG00000168517.11	ENST00000585340.2	1345	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	49	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGTATCTAGGATTGAT	22	False	NA	24	True	ATTAAA	-20	NA	45160729	45170035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_45160944_45162749_45162860_45169014
H1_mix_00038964	chr17	+	502	3	FSM	ENSG00000267278.6	ENST00000585346.5	488	3	-14	0	4	0	multi-exon	TRUE	canonical	3	47	junction_2	1	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTGGCAGGGGCTGGCT	9	False	NA	NA	False	NA	NA	NA	45247939	45267466	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_45248004_45255134_45255219_45267112
H1_mix_00038967	chr17	+	462	2	FSM	ENSG00000267278.6	ENST00000588160.1	573	2	111	0	111	0	multi-exon	FALSE	canonical	3	47	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGACAGAGGTAAGGGTT	101	False	NA	NA	False	GGGGCT	-9	NA	45255134	45267490	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_45255219_45267112
H1_mix_00038968	chr17	+	5150	1	FSM	ENSG00000264070.1	ENST00000580842.1	1059	1	-2983	-1108	-2983	1108	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATCCTGGCCAACATGGT	NA	False	NA	NA	False	NA	NA	NA	45582887	45588037	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_45582900_45588000
H1_mix_00038969	chr17	+	996	1	FSM	ENSG00000280022.1	ENST00000625174.1	749	1	-159	-88	-159	88	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAATAATAAAGCGAAAACC	8789	False	NA	NA	False	NA	NA	NA	45592461	45593457	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_45592500_45593500
H1_mix_00038976	chr17	+	1045	3	ISM	ENSG00000176681.14	ENST00000320254.5	5177	14	27180	8516	27180	-8499	internal_fragment	FALSE	canonical	3	52	junction_1	4.5	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTTTTCAAAACTTTTT	NA	False	NA	NA	False	CATAAA	-11	NA	46322310	46329278	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_46322394_46322952_46323028_46328391
H1_mix_00038977	chr17	+	8376	9	NIC	ENSG00000238083.8	novel	5669	15	NA	NA	1662	-3035	intron_retention	FALSE	canonical	3	15	junction_1	28.5295899024154	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTGCATGCAAGACCCTA	463	False	NA	NA	False	AATAAA	-14	NA	46513172	46552608	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_46515322_46517361_46517434_46520211_46520284_46523083_46523156_46523803_46523885_46540175_46540248_46540806_46540882_46546254_46549844_46550414
H1_mix_00038979	chr17	+	548	6	FSM	ENSG00000073969.18	ENST00000571864.5	548	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	116.757183933152	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCGTCACTTAATCTTAT	17	False	NA	NA	False	AAAAAG	-6	NA	46590754	46640696	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_46590788_46624243_46624330_46626612_46626713_46637375_46637543_46640053_46640162_46640642
H1_mix_00038980	chr17	+	1011	3	FSM	ENSG00000108433.17	ENST00000640709.1	2679	3	-10	1678	0	-292	multi-exon	FALSE	canonical	3	280	junction_1	16.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTGGTGTAGGGAGAAGT	-18	True	NA	NA	False	NA	NA	NA	46923127	46931950	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_46923222_46929519_46929585_46931098
H1_mix_00038984	chr17	+	959	6	ISM	ENSG00000262633.2	ENST00000639822.1	1564	8	-17	82932	10	-80154	5prime_fragment	FALSE	canonical	3	15	junction_5	134.406845063784	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGAAGTCCCTTGAAAG	-3	True	NA	26	True	ATTAAA	-19	NA	46923142	46967000	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_46923222_46929519_46929585_46931098_46931208_46932066_46932200_46938598_46938705_46966533
H1_mix_00038986	chr17	+	1433	8	NIC	ENSG00000108433.17	novel	1425	10	NA	NA	0	391	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	121.31776456892	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAAGTTGTTGTTGTTGTT	7	True	NA	NA	False	GATAAA	-22	NA	46923152	46975915	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_46923222_46929519_46929585_46931098_46931208_46932066_46932200_46935028_46935170_46938598_46938705_46966533_46966627_46975198
H1_mix_00038987	chr17	+	1010	7	NIC	ENSG00000108433.17	novel	1115	7	NA	NA	1	-6	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	115.305993869453	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTCACCTTCTTCCTTG	21	True	NA	-33	True	NA	NA	NA	46923166	46966941	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_46923222_46929523_46929585_46931101_46931208_46932066_46932200_46935028_46935170_46938598_46938705_46966533
H1_mix_00038988	chr17	+	1403	7	NIC	ENSG00000108433.17	novel	1245	7	NA	NA	4	-72	combination_of_known_junctions	FALSE	canonical	2	7	junction_6	104.17453303631	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGAATTTGAATGGGTTT	30	False	NA	-80	True	NA	NA	NA	46923175	46941264	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_46923222_46929519_46929585_46931098_46931208_46932066_46932200_46935028_46935170_46938598_46938705_46940461
H1_mix_00038992	chr17	+	3764	24	FSM	ENSG00000141279.17	ENST00000677120.1	3758	24	-6	0	0	0	multi-exon	FALSE	canonical	3	12	junction_23	133.314231460932	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGCGAGACTGTCTCAAAA	13	True	NA	NA	False	NA	NA	NA	47531215	47624665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_47531556_47545908_47545994_47569416_47569495_47579389_47579512_47582741_47582850_47585499_47585701_47586147_47586245_47586364_47586399_47587229_47587345_47590716_47590882_47591955_47592061_47592484_47592546_47596352_47596463_47599675_47599740_47601607_47601748_47603914_47604050_47605332_47605553_47612459_47612603_47613668_47613726_47618349_47618458_47619008_47619165_47619736_47619785_47621767_47621971_47623796
H1_mix_00038994	chr17	+	5195	19	FSM	ENSG00000141279.17	ENST00000678909.1	5195	19	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	135.287576647162	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAATGTGAAACTGATGT	4	True	NA	15	True	AATAAA	-3	NA	47531258	47623259	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_47531556_47569416_47569495_47579389_47579512_47582741_47582850_47585499_47586399_47587229_47587345_47590716_47590882_47591955_47592061_47592484_47592546_47596352_47596463_47599675_47599740_47601607_47601748_47603914_47604050_47605332_47605553_47612459_47612603_47613668_47613726_47618349_47618458_47619008_47619785_47621767
H1_mix_00039004	chr17	+	705	5	FSM	ENSG00000198933.10	ENST00000537587.6	705	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	4.63680924774785	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCATGGTGAGATCTCAG	455	False	NA	NA	False	NA	NA	NA	47694618	47698767	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_47694664_47696078_47696338_47696710_47696834_47697088_47697194_47698594
H1_mix_00039007	chr17	+	459	4	FSM	ENSG00000108465.15	ENST00000584525.5	530	4	-34	105	-2	0	multi-exon	FALSE	canonical	2	9	junction_3	264.364647157419	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGTGTGGGCCAAGGGCC	-22	True	NA	NA	False	NA	NA	NA	47971015	47974031	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_47971153_47971361_47971408_47973518_47973694_47973930
H1_mix_00039010	chr17	+	2540	13	FSM	ENSG00000108465.15	ENST00000585163.5	2519	13	-21	0	0	0	multi-exon	FALSE	canonical	2	351	junction_6	96.0538043667888	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCTTCAGTACTGACAG	23	False	NA	23	True	AATAAA	-13	NA	47971103	47981768	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_47971153_47971361_47971408_47973518_47973651_47973930_47974032_47974399_47975338_47975513_47975654_47975868_47976014_47976711_47976823_47977831_47977911_47978828_47978918_47980592_47980799_47981162_47981335_47981436
H1_mix_00039011	chr17	+	2632	13	FSM	ENSG00000108465.15	ENST00000580287.5	2609	13	-23	0	0	0	multi-exon	FALSE	canonical	2	26	junction_12	164.288596851868	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCAGTACTGACAGTTCC	23	False	NA	27	True	AATAAA	-17	NA	47971103	47981772	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_47971153_47971361_47971408_47973518_47973651_47973930_47974032_47974399_47975338_47975513_47976014_47976711_47976823_47977831_47977911_47978828_47978918_47980592_47980799_47981162_47981335_47981436_47981460_47981586
H1_mix_00039015	chr17	+	2347	2	FSM	ENSG00000108465.15	ENST00000582482.1	2455	2	108	0	108	0	multi-exon	FALSE	canonical	3	645	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGTACTGACAGTTCCT	8185	False	NA	28	True	AATAAA	-18	NA	47979324	47981773	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_47981335_47981436
H1_mix_00039016	chr17	+	2190	4	FSM	ENSG00000082641.16	ENST00000536222.5	2172	4	-18	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	111.547697819762	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGGGTTTGAAGCCCACCA	-9	True	NA	NA	False	NA	NA	NA	48054691	48059653	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_48055151_48056385_48056599_48057343_48057503_48058294
H1_mix_00039023	chr17	+	679	3	FSM	ENSG00000159199.14	ENST00000502964.5	679	3	0	0	0	0	multi-exon	FALSE	canonical	3	2547	junction_2	168.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGTCTGTGCCTCTGTC	1321	False	NA	38	True	ATTAAA	-18	NA	48894166	48895871	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_48894450_48895155_48895335_48895654
H1_mix_00039025	chr17	+	4229	5	FSM	ENSG00000159202.18	ENST00000513342.5	4250	5	21	0	21	0	multi-exon	FALSE	canonical	3	518	junction_3	8.69985632065266	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGGAAGTGCCTGTGGG	477	False	NA	6	True	AATAAA	-15	NA	48911199	48929054	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_48913022_48916075_48916188_48921159_48921273_48922846_48922938_48926963
H1_mix_00039026	chr17	+	568	5	FSM	ENSG00000159217.10	ENST00000499130.6	568	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	615.283014148774	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTACTCGGGAGGCTGAGG	NA	False	NA	NA	False	AATACA	-38	NA	49013916	49036833	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_49014036_49025617_49025667_49026465_49026518_49031909_49031974_49036549
H1_mix_00039030	chr17	+	5622	2	FSM	ENSG00000182575.8	ENST00000328741.6	5635	2	-4	17	-4	-17	multi-exon	FALSE	canonical	3	7	junction_1	0	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTACTTCCTCCTGTCTTT	19	True	NA	11	True	AATAAA	-1	NA	49575866	49583810	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_49576274_49578595
H1_mix_00039031	chr17	+	3469	14	FSM	ENSG00000136504.13	ENST00000424009.6	3469	14	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	138.118977953813	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTTCATCTGGGGGCT	20	False	NA	19	True	AATAAA	-18	NA	49788705	49829096	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_49788850_49791885_49792034_49796749_49796927_49798318_49798559_49805362_49805446_49811475_49811575_49815802_49815914_49817819_49818012_49821336_49821427_49821649_49821791_49823201_49823296_49825999_49826147_49826692_49826800_49827400
H1_mix_00039035	chr17	+	1411	2	FSM	ENSG00000108813.11	ENST00000411890.3	1404	2	-7	0	-7	0	multi-exon	FALSE	canonical	3	13	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCTTTCCCACCCCCTC	796	False	NA	NA	False	NA	NA	NA	49972758	49974600	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_49973270_49973700
H1_mix_00039037	chr17	+	351	4	FSM	ENSG00000005884.18	ENST00000512553.5	351	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	17.3076733143296	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCACGGCCACCTCTTG	2748	False	NA	NA	False	NA	NA	NA	50070872	50074514	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_50070931_50073915_50074005_50074143_50074281_50074447
H1_mix_00039039	chr17	+	568	4	FSM	ENSG00000167105.8	ENST00000511882.1	582	4	14	0	14	0	multi-exon	FALSE	canonical	3	5	junction_1	118.873415400117	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATGCCTCAGCTGGGAT	1	True	NA	NA	False	NA	NA	NA	50274892	50279116	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_50275044_50277714_50277741_50278555_50278631_50278800
H1_mix_00039041	chr17	+	2340	17	NIC	ENSG00000167107.13	novel	2251	17	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_10	20.8483175280405	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGCTGGTGGGCTCTCT	11	False	NA	15	True	CATAAA	-21	NA	50426262	50474837	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_50426390_50460676_50460873_50461241_50461371_50461632_50461687_50462183_50462303_50462419_50462586_50463155_50463252_50463394_50463553_50463817_50463910_50464217_50464429_50464525_50464600_50471027_50471136_50472427_50472580_50473664_50473807_50473893_50474005_50474198_50474268_50474501
H1_mix_00039046	chr17	+	571	4	FSM	ENSG00000136449.15	ENST00000459754.1	571	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	1.24721912892465	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGCAGCACCAGCCGGACAC	4295	False	NA	NA	False	NA	NA	NA	50520993	50523052	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_50521226_50521315_50521432_50521972_50522082_50522938
H1_mix_00039047	chr17	+	420	2	FSM	ENSG00000136449.15	ENST00000477744.1	427	2	0	7	0	-4	multi-exon	FALSE	canonical	1	1	junction_1	0	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTACTACTTCCGTGTGCC	NA	False	NA	-3	True	AATAAA	-25	NA	50529177	50531493	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_50529431_50531326
H1_mix_00039048	chr17	+	804	2	FSM	ENSG00000049283.19	ENST00000503246.1	804	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGCCGCTACGGCGAGGAC	-13	True	NA	NA	False	NA	NA	NA	50532681	50537061	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_50532845_50536420
H1_mix_00039050	chr17	+	2449	10	FSM	ENSG00000049283.19	ENST00000512379.5	2449	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	11.3137084989848	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTACAGCTCTTCTCAACC	8	True	NA	NA	False	NA	NA	NA	50532737	50542486	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_50532986_50536420_50536626_50536707_50537119_50538078_50538198_50539186_50539316_50540246_50540335_50540792_50541063_50541228_50541334_50541463_50541695_50541843
H1_mix_00039056	chr17	+	788	5	FSM	ENSG00000108848.16	ENST00000503728.1	783	5	-5	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	243.806275554999	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTTAGCCTTTGGATTT	61	False	NA	-30	True	NA	NA	NA	50746613	50752585	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_50746703_50750500_50750642_50750746_50750853_50751296_50751363_50752199
H1_mix_00039057	chr17	+	788	5	FSM	ENSG00000239672.8	ENST00000475573.5	781	5	-7	0	-7	0	multi-exon	FALSE	canonical	3	15	junction_3	1290.15018505599	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGATTCATTGAGTTGGTT	-5	True	NA	27	True	ATTAAA	-17	NA	51153589	51162035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_51153663_51155650_51155781_51159979_51160082_51161097_51161273_51161727
H1_mix_00039059	chr17	+	664	7	FSM	ENSG00000011260.14	ENST00000583205.5	664	7	0	0	0	0	multi-exon	FALSE	canonical	2	29	junction_3	282.339433228084	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCTTAAGAGCCAGTAAT	NA	False	NA	NA	False	AATATA	-25	NA	51280015	51297878	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_51280106_51280388_51280480_51285244_51285369_51288123_51288204_51293902_51294046_51296964_51297004_51297781
H1_mix_00039060	chr17	+	236	1	FSM	ENSG00000262902.1	ENST00000574371.1	625	1	419	-30	419	30	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTATTACCTAAATGAATG	NA	False	NA	48	True	CATAAA	-36	NA	53106152	53106388	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_53106200_53106400
H1_mix_00039062	chr17	+	1631	11	FSM	ENSG00000141198.16	ENST00000570371.5	2442	11	811	0	396	0	multi-exon	FALSE	canonical	1	1	junction_1	143.767172887276	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTGAAGTCAGGTTGAAT	NA	False	NA	67	True	ATTAAA	-14	NA	54900197	54937316	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_54900234_54900393_54900924_54903707_54903793_54905488_54905568_54912665_54912816_54913747_54913874_54914638_54914744_54915745_54915863_54930072_54930207_54936648_54936710_54937108
H1_mix_00039063	chr17	+	2228	16	FSM	ENSG00000141198.16	ENST00000445275.6	2228	16	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_12	129.634289016791	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAATTTAATACTTTTT	0	True	NA	1	True	AATAAA	-9	NA	54900751	54961949	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_54900924_54903707_54903793_54905488_54905568_54912665_54912816_54913747_54913874_54914638_54914744_54915745_54915863_54930072_54930207_54936648_54936710_54937108_54937227_54938923_54939021_54947260_54947313_54949550_54949624_54950044_54950127_54960565_54960628_54961234
H1_mix_00039064	chr17	+	2044	14	NNC	ENSG00000141198.16	novel	1522	14	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_13	159.835751493905	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTAATACTTTTTTTTTT	4	True	NA	6	True	AATAAA	-14	NA	54900806	54961954	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_54900924_54912665_54912816_54913747_54913874_54914638_54914744_54915745_54915863_54930072_54930207_54936648_54936710_54937108_54937227_54938923_54939021_54947260_54947313_54949517_54949624_54950044_54950127_54960565_54960628_54961237
H1_mix_00039067	chr17	+	1541	14	FSM	ENSG00000141198.16	ENST00000536554.5	1522	14	-19	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	132.203313030844	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAATTACTTAGTCCT	-10	True	NA	NA	False	NA	NA	NA	54900833	54961475	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_54900924_54912665_54912816_54913747_54913874_54914638_54914744_54915745_54915863_54930072_54930207_54936648_54936710_54937108_54937227_54938923_54939021_54947260_54947313_54949517_54949624_54950044_54950127_54960565_54960628_54961234
H1_mix_00039069	chr17	+	808	4	ISM	ENSG00000141198.16	ENST00000574318.1	552	5	-320	9217	27	2924	5prime_fragment	FALSE	canonical	3	286	junction_3	7.48331477354788	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTACTCTTAATGGTCTTA	NA	False	NA	NA	False	ATTAAA	-27	NA	54938603	54950277	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_54939021_54947260_54947313_54949517_54949624_54950044
H1_mix_00039074	chr17	+	3105	12	FSM	ENSG00000121057.13	ENST00000571629.5	3105	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	282.880665783967	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCACTCAAGTCAAAGATGA	434	False	NA	NA	False	NA	NA	NA	57085713	57120375	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_57085867_57086372_57086538_57105440_57107179_57110024_57110159_57111797_57111925_57112490_57112619_57114458_57114637_57116110_57116262_57116859_57116928_57118380_57118455_57118981_57119045_57120249
H1_mix_00039076	chr17	+	3098	11	FSM	ENSG00000121057.13	ENST00000572557.5	3098	11	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	216.703853219088	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGGA	356	False	NA	NA	False	NA	NA	NA	57095843	57120570	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_57095960_57105440_57107179_57110024_57110159_57111797_57111925_57112490_57112619_57114458_57114637_57116110_57116262_57116859_57116928_57118380_57118455_57118981_57119045_57120249
H1_mix_00039077	chr17	+	3153	11	FSM	ENSG00000121057.13	ENST00000539273.5	3153	11	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	215.244070766189	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTCTCAGCTGTTTAAAAA	-5	True	NA	NA	False	NA	NA	NA	57096577	57120555	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_57096764_57105440_57107179_57110024_57110159_57111797_57111925_57112490_57112619_57114458_57114637_57116110_57116262_57116859_57116928_57118380_57118455_57118981_57119045_57120249
H1_mix_00039082	chr17	+	1692	3	FSM	ENSG00000265148.7	ENST00000585236.5	1791	3	99	0	90	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTACACTCTATTATCT	109	False	NA	9	True	AATAAA	-21	NA	58337447	58353287	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_58337680_58351743_58351915_58351998
H1_mix_00039086	chr17	+	1302	10	NIC	ENSG00000108384.15	novel	2562	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	32.2459682617192	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAGATCATATGAAGTGAA	22	True	NA	10	True	AATAAA	-21	NA	58692623	58734331	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_58692686_58694930_58695190_58696692_58696860_58703195_58703330_58705877_58706023_58709858_58709991_58720745_58720813_58724039_58724101_58732483_58732545_58734117
H1_mix_00039089	chr17	+	480	4	FSM	ENSG00000175155.11	ENST00000581865.1	480	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	27.8128667266709	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCCTTGCCATCCGGGGC	8	True	NA	NA	False	NA	NA	NA	59331688	59397291	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_59331825_59388326_59388371_59389359_59389469_59397100
H1_mix_00039090	chr17	+	761	3	FSM	ENSG00000108406.10	ENST00000578204.1	747	3	-14	0	-14	0	multi-exon	FALSE	canonical	3	113	junction_1	12	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTAAAGCAGCTAAAGGGT	NA	False	NA	NA	False	NA	NA	NA	59599359	59605656	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_59599484_59602521_59602617_59605114
H1_mix_00039091	chr17	+	5564	33	NNC	ENSG00000141367.12	novel	8369	32	NA	NA	39	100	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_31	354.925762484213	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGGGGGAAAACAGGCAAC	22	False	NA	-81	True	NA	NA	NA	59619727	59693922	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_59620174_59644275_59644484_59647397_59647667_59648239_59648402_59651202_59651317_59655853_59656028_59660390_59660589_59661442_59661644_59663841_59663995_59664786_59664910_59666102_59666241_59666479_59666645_59666796_59666978_59668776_59668941_59673646_59673773_59674700_59674844_59676953_59677189_59679396_59679520_59680911_59681058_59681294_59681479_59681646_59681840_59682270_59682429_59682628_59682794_59682906_59683015_59683094_59683263_59683386_59683537_59683624_59683757_59683874_59683986_59685055_59685227_59685586_59685809_59690635_59690712_59691251_59691314_59693727
H1_mix_00039099	chr17	+	606	1	FSM	ENSG00000270264.1	ENST00000605113.1	538	1	96	-164	96	164	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCCAAAGAACCTCAGGA	112	False	NA	NA	False	AAAACA	-41	NA	59885110	59885716	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_59885100_59885700
H1_mix_00039101	chr17	+	1517	6	ISM	ENSG00000170836.13	ENST00000392995.7	2996	7	-78	7509	-2	-1497	5prime_fragment	FALSE	canonical	1	1	junction_5	36.515202313557	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAACTTATTATCAGAGAG	-23	True	NA	NA	False	AAGAAA	-5	NA	60600190	60656964	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_60600887_60623520_60623750_60633852_60633978_60647891_60648083_60656598_60656842_60656931
H1_mix_00039111	chr17	+	3549	21	NIC	ENSG00000146872.19	novel	3512	23	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	124	junction_1	49.7	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTCTTGGATTCTCTGAA	NA	False	NA	25	True	AATAAA	-19	NA	62478825	62613490	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_62479291_62481123_62481207_62520772_62520845_62522203_62522274_62523133_62523178_62536169_62536338_62552301_62552398_62553662_62553756_62560015_62560127_62565000_62565138_62573214_62573368_62576708_62576776_62578476_62578575_62580110_62580193_62586134_62586227_62596584_62596675_62600650_62600821_62602041_62602181_62606129_62606242_62608040_62608149_62612391
H1_mix_00039116	chr17	+	3238	14	FSM	ENSG00000011028.14	ENST00000583597.5	3238	14	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_2	25.6870100480204	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGCAAACAAATAAAAC	176	False	NA	-27	True	AAAAAG	-8	NA	62680630	62693553	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_62680961_62681061_62681130_62681836_62681938_62682234_62682378_62688288_62688404_62688500_62688665_62688851_62688961_62689521_62689761_62689893_62690063_62690155_62690306_62690641_62690762_62690948_62691129_62692111_62692139_62692230
H1_mix_00039117	chr17	+	249	1	FSM	ENSG00000199697.1	ENST00000362827.1	106	1	-182	39	-182	-39	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGATGCTATGCAAATTCC	190	False	NA	NA	False	AATACA	-25	NA	62683722	62683971	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_62683700_62684000
H1_mix_00039118	chr17	+	12091	27	NIC	ENSG00000170921.16	novel	12511	28	NA	NA	305	0	combination_of_known_junctions	TRUE	canonical	1	2	junction_23	5.49515655483355	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCATGGTGTTGTGATG	14	True	NA	10	True	TATAAA	-15	NA	62966539	63427699	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_62966750_63009536_63009627_63073942_63074015_63099174_63099358_63193990_63194140_63200770_63200958_63237813_63238078_63267747_63267874_63314387_63314670_63318956_63319091_63340100_63340333_63351249_63351417_63354782_63355391_63379717_63379827_63388634_63388758_63389307_63389545_63395742_63395929_63398820_63398915_63405121_63405256_63406153_63406278_63411510_63411687_63411997_63412131_63412679_63412710_63413542_63413635_63415527_63415675_63418306_63418408_63419998
H1_mix_00039119	chr17	+	11721	25	FSM	ENSG00000170921.16	ENST00000424789.6	11721	25	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	5.40688218847054	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCATGGTGTTGTGATG	23	False	NA	10	True	TATAAA	-15	NA	63009555	63427699	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_63009627_63073942_63074015_63099174_63099247_63193990_63194140_63200770_63200958_63237813_63238078_63267747_63267874_63314387_63314670_63318956_63319091_63340100_63340333_63351249_63351417_63354782_63355391_63379717_63379827_63388634_63388758_63389307_63389545_63395742_63395929_63398820_63398915_63405121_63405256_63406153_63406278_63411510_63411687_63411997_63412131_63413542_63413635_63415527_63415675_63418306_63418408_63419998
H1_mix_00039120	chr17	+	331	3	FSM	ENSG00000170921.16	ENST00000580466.1	331	3	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACAGAAGTTCAGCCAGG	NA	False	NA	NA	False	NA	NA	NA	63073958	63194082	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_63074015_63099174_63099358_63193990
H1_mix_00039122	chr17	+	1322	7	ISM	ENSG00000159640.17	ENST00000579314.5	2551	14	6319	156	817	24	3prime_fragment	FALSE	canonical	2	12	junction_1	4.30761599444003	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCCTGCTCCTCCTGCCC	1208	False	NA	NA	False	NA	NA	NA	63491164	63497462	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_63491382_63493435_63493660_63493921_63494067_63494371_63494471_63496393_63496517_63496797_63496986_63497136
H1_mix_00039126	chr17	+	3734	13	FSM	ENSG00000173826.15	ENST00000314672.10	3758	13	24	0	-21	0	multi-exon	TRUE	canonical	2	4	junction_10	4.38669072941729	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGTGTGTAACTTATCTG	31	False	NA	4	True	AATAAA	-20	NA	63523381	63546727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_63523490_63524138_63524370_63530090_63530253_63530336_63530543_63533885_63534312_63535668_63536069_63538064_63538265_63538409_63538663_63542240_63542435_63543575_63543661_63544248_63544412_63545077_63545265_63545608
H1_mix_00039129	chr17	+	4818	17	FSM	ENSG00000198909.8	ENST00000361357.7	4818	17	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_3	35.6663685248442	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCAGAGGGGTCCTGTGGC	5	True	NA	12	True	AATAAA	-13	NA	63622441	63696303	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_63622764_63632680_63632803_63634708_63634802_63646033_63646075_63652556_63652657_63657793_63657908_63666939_63667061_63681765_63681900_63685516_63685591_63688526_63688595_63688788_63688882_63689543_63689736_63690263_63690413_63691101_63691234_63691732_63691863_63692241_63692420_63693548
H1_mix_00039132	chr17	+	828	8	FSM	ENSG00000087191.13	ENST00000584320.5	804	8	-24	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	672.756741068465	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCGACTCCATCGGCTCCT	-6	True	NA	NA	False	NA	NA	NA	63827430	63831105	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_63827515_63828118_63828210_63829493_63829564_63829851_63829950_63830132_63830190_63830270_63830502_63830808_63830936_63831035
H1_mix_00039136	chr17	+	4216	19	NNC	ENSG00000258890.8	novel	2754	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	54.9072450188093	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTATTGCTTTTGAATTTA	20	True	NA	12	True	AATAAA	-16	NA	64507010	64537946	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_64507117_64508591_64508721_64510172_64510281_64514247_64514359_64517718_64519437_64521401_64521528_64522701_64522896_64525769_64525883_64526070_64526201_64527110_64527265_64529287_64529428_64530925_64531019_64531889_64532023_64532838_64533009_64533116_64533192_64534584_64534738_64536601_64536749_64537040_64537113_64537602
H1_mix_00039138	chr17	+	1461	10	ISM	ENSG00000258890.8	ENST00000553956.6	2669	20	20050	0	0	0	3prime_fragment	FALSE	canonical	3	29	junction_3	58.35354147324	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTATTGCTTTTGAATTTA	9420	False	NA	12	True	AATAAA	-16	NA	64527134	64537946	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_64527265_64529287_64529428_64530925_64531023_64531889_64532023_64532838_64533009_64533116_64533192_64534584_64534738_64536601_64536749_64537040_64537113_64537602
H1_mix_00039140	chr17	+	801	5	FSM	ENSG00000075429.9	ENST00000307139.4	926	5	125	0	125	0	multi-exon	FALSE	canonical	1	1	junction_1	1.92028643696715	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACCCTTCCTGTTCTCTC	101	False	NA	NA	False	NA	NA	NA	66877397	66885278	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_66877529_66878971_66879059_66880556_66880698_66884515_66884662_66884982
H1_mix_00039141	chr17	+	97	1	FSM	ENSG00000207688.2	ENST00000384955.2	97	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGATTTGCAATTATTCT	NA	False	NA	NA	False	NA	NA	NA	67471488	67471585	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_67471500_67471600
H1_mix_00039142	chr17	+	560	4	FSM	ENSG00000130935.10	ENST00000577687.1	560	4	0	0	0	0	multi-exon	FALSE	canonical	3	545	junction_1	58.4826659979025	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAAGTTAGACTCCAATGG	NA	False	NA	NA	False	NA	NA	NA	67736579	67737971	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_67736755_67737070_67737146_67737507_67737693_67737846
H1_mix_00039144	chr17	+	8448	25	NIC	ENSG00000171634.19	novel	11292	30	NA	NA	76	-489	combination_of_known_junctions	FALSE	canonical	3	24	junction_4	80.8032590101827	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGCTCTAGTTTTTTGT	45	False	NA	NA	False	NA	NA	NA	67825739	67959888	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_67826338_67853939_67854763_67866463_67866688_67874816_67875021_67886127_67886317_67891843_67892035_67893369_67893726_67894033_67894166_67903788_67903919_67904701_67904841_67909581_67909762_67910876_67913188_67918713_67918839_67920014_67920144_67922839_67922991_67924546_67924590_67928354_67928602_67929335_67929488_67931910_67932020_67940438_67940657_67944149_67944373_67945408_67946326_67947725_67947809_67948080_67948307_67959540
H1_mix_00039145	chr17	+	11036	31	FSM	ENSG00000171634.19	ENST00000644067.1	11036	31	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	81.7841603789443	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTGTACGTAATAGGAC	338	False	NA	-50	True	AATAGA	-44	NA	67826032	67984317	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_67826338_67853939_67854763_67866463_67866688_67874816_67875021_67875555_67875745_67886127_67886317_67891843_67892035_67893369_67893726_67894033_67894166_67903788_67903919_67904701_67904841_67909581_67909762_67910876_67913188_67918713_67918839_67920014_67920144_67922839_67922991_67924546_67924590_67928354_67928602_67929335_67929488_67931910_67932020_67940438_67940657_67944149_67944373_67945408_67946326_67947725_67947809_67948080_67948307_67959540_67959876_67963332_67963507_67964211_67964405_67966571_67966657_67975771_67975959_67982251
H1_mix_00039146	chr17	+	10373	30	NIC	ENSG00000171634.19	novel	10607	31	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_16	77.4986479111851	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTGCAGTTTCTAATGA	417	False	NA	11	True	AATAAA	-21	NA	67826111	67984378	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_67826338_67853939_67854763_67866463_67866688_67874816_67875021_67891843_67892035_67893369_67893726_67894033_67894166_67903788_67903919_67904701_67904841_67909581_67909762_67910876_67913188_67918713_67918839_67920014_67920144_67922839_67922991_67924546_67924590_67928354_67928602_67928958_67929121_67929335_67929488_67931910_67932020_67940438_67940657_67944149_67944373_67945408_67945897_67947725_67947809_67948080_67948307_67959540_67959876_67963332_67963507_67964211_67964405_67966571_67966657_67975771_67975959_67982251
H1_mix_00039148	chr17	+	1963	9	FSM	ENSG00000182481.10	ENST00000677918.1	1963	9	0	0	0	0	multi-exon	FALSE	canonical	3	4203	junction_6	276.50517061169	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATAATCCCAGCTACTCA	4	True	NA	NA	False	NA	NA	NA	68035712	68044968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_68035841_68037109_68037208_68037357_68037496_68040677_68040767_68042084_68042354_68042904_68043000_68043099_68043364_68043837_68044072_68044320
H1_mix_00039149	chr17	+	2725	9	FSM	ENSG00000182481.10	ENST00000677223.1	2708	9	-17	0	0	0	multi-exon	FALSE	canonical	3	4203	junction_6	212.698583681227	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGAAGCTTGTCCTCTG	4	True	NA	-85	True	NA	NA	NA	68035712	68046749	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_68035841_68037109_68037208_68037357_68037496_68040677_68040767_68042084_68042354_68042904_68043000_68043099_68043364_68043837_68044504_68045771
H1_mix_00039150	chr17	+	2950	10	FSM	ENSG00000182481.10	ENST00000677086.1	2950	10	0	0	0	0	multi-exon	FALSE	canonical	3	4203	junction_5	360.632469111945	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCCTATGTGTTGCTTT	236	False	NA	20	True	AATAAA	-30	NA	68036030	68046854	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_68037208_68037357_68037496_68040677_68040767_68042084_68042354_68042904_68043000_68043099_68043364_68043837_68044072_68044320_68044504_68045771_68045922_68046503
H1_mix_00039151	chr17	+	1084	1	FSM	ENSG00000274561.1	ENST00000613178.1	446	1	-110	-528	-110	528	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTACTTATATAGCAACCT	NA	False	NA	NA	False	NA	NA	NA	68131351	68132435	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_68131400_68132400
H1_mix_00039152	chr17	+	1096	1	FSM	ENSG00000267731.1	ENST00000591222.1	2919	1	-6	1829	-6	-1829	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCGATGATTATTATAAAA	8327	False	NA	NA	False	AGTAAA	-34	NA	68189877	68190973	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_68189900_68191000
H1_mix_00039153	chr17	+	2660	8	FSM	ENSG00000196704.14	ENST00000674770.2	2650	8	-10	0	-10	0	multi-exon	FALSE	canonical	2	15	junction_1	265.206119300226	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCGGCTTTCAGGTTTATT	-8	True	NA	NA	False	NA	NA	NA	68205470	68257712	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_68206239_68248639_68248706_68250187_68250471_68250793_68250968_68251049_68251179_68254403_68254568_68255699_68255877_68256813
H1_mix_00039161	chr17	+	4554	12	FSM	ENSG00000141337.13	ENST00000448504.6	4642	12	88	0	88	0	multi-exon	TRUE	canonical	2	4	junction_1	5.8124972229621	355	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	88	False	NA	NA	False	NA	NA	NA	68259269	68422731	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_68259427_68306942_68307712_68343603_68343792_68347124_68347173_68351574_68351687_68356666_68356805_68368547_68368745_68370443_68370525_68385063_68385173_68395072_68395194_68401359_68401451_68420188
H1_mix_00039162	chr17	+	1004	8	ISM	ENSG00000108946.16	ENST00000589017.6	5749	12	112	8732	-93	-94	5prime_fragment	FALSE	canonical	1	1	junction_1	790.511381890203	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTATGGAACACCGAGAG	75	False	NA	NA	False	NA	NA	NA	68511891	68525818	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_68512143_68514986_68515120_68515393_68515577_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753
H1_mix_00039170	chr17	+	1555	7	FSM	ENSG00000108984.15	ENST00000586641.5	1542	7	-43	30	-29	-23	multi-exon	FALSE	canonical	3	83	junction_1	11.6619037896906	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TACAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-39	NA	69414667	69521803	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_69415001_69505779_69505847_69516854_69516904_69517499_69517614_69519312_69519433_69520269_69520387_69521048
H1_mix_00039171	chr17	+	227	1	FSM	ENSG00000278972.1	ENST00000624645.1	2450	1	2207	16	2207	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAGATCCTGTCTCAAAA	NA	False	NA	NA	False	NA	NA	NA	69435290	69435517	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_69435300_69435500
H1_mix_00039173	chr17	+	4068	13	FSM	ENSG00000166685.13	ENST00000438720.7	4051	13	-17	0	0	0	multi-exon	TRUE	canonical	3	85	junction_3	13.1582251420505	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTGCCTCTGCTCATCT	4	True	NA	17	True	AATAAA	-22	NA	73193054	73208504	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_73193385_73196506_73196752_73196899_73197082_73197225_73197397_73199864_73200022_73200565_73200777_73201108_73201901_73202999_73203147_73203631_73203794_73205552_73205681_73206153_73206263_73206707_73206818_73207180
H1_mix_00039176	chr17	+	540	5	FSM	ENSG00000141540.11	ENST00000578825.5	540	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	3.89711431702997	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGTGGTGGTTGGTCTGC	7015	False	NA	NA	False	NA	NA	NA	74222643	74244073	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_74222658_74230887_74231000_74237293_74237515_74243373_74243470_74243976
H1_mix_00039177	chr17	+	2454	4	FSM	ENSG00000170412.18	ENST00000481232.2	1592	4	-862	0	-718	0	multi-exon	FALSE	canonical	3	8	junction_2	82.4135911121461	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGCTCTGGGATTGTGG	316	False	NA	27	True	AATAAA	-20	NA	74430665	74447429	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_74432142_74439744_74440047_74443817_74443913_74446848
H1_mix_00039186	chr17	+	2982	6	NNC	ENSG00000170190.16	novel	1940	7	NA	NA	1	0	intron_retention	FALSE	canonical	3	13	junction_4	30.4801574799081	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAGGAGGTTGGTTTGGAT	1	True	NA	NA	False	AATAAA	-22	NA	75087965	75106162	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_75089305_75093588_75093836_75098037_75098182_75100006_75100817_75104021_75104181_75105879
H1_mix_00039196	chr17	+	4981	32	NIC	ENSG00000177728.17	novel	5412	32	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	49	junction_13	41.9478145643151	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAATACCTGTGGCTGGT	21	True	NA	NA	False	ATTAAA	-15	NA	75456659	75500082	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_75456752_75471799_75471930_75485427_75485548_75485870_75485999_75486289_75486427_75487931_75488135_75488758_75488911_75489265_75489369_75489575_75489663_75490233_75490351_75490701_75490759_75491048_75491154_75491302_75491468_75491690_75491853_75492473_75492790_75492928_75493103_75493490_75493594_75493698_75493917_75494626_75494809_75494895_75495035_75495283_75495400_75495543_75495644_75495965_75496075_75496281_75496472_75496729_75496808_75497112_75497199_75497780_75497863_75498174_75498324_75498443_75498539_75498628_75498723_75498911_75499083_75499261
H1_mix_00039198	chr17	+	3825	23	NIC	ENSG00000177728.17	novel	4703	31	NA	NA	12	-2	combination_of_known_junctions	FALSE	canonical	3	49	junction_4	41.6546208483108	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGTGGCTGGTCTGTAA	NA	False	NA	NA	False	ATTAAA	-21	NA	75490291	75500088	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_75490351_75490701_75490759_75491048_75491154_75491302_75491468_75491690_75491901_75492473_75492790_75492928_75493103_75493490_75493594_75493698_75493917_75494626_75494809_75494895_75495035_75495283_75495400_75495543_75495644_75495965_75496075_75496281_75496472_75496729_75496808_75497112_75497199_75497780_75497863_75498174_75498324_75498443_75498539_75498628_75498723_75498911_75499083_75499261
H1_mix_00039200	chr17	+	3771	23	Fusion	ENSG00000182173.14_ENSG00000177728.17	novel	3543	24	NA	NA	0	0	multi-exon	FALSE	canonical	1	1	junction_12	139.499163183603	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGTGCTATAAAGCCAAAGC	NA	False	NA	-29	True	NA	NA	NA	75491048	75524693	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr17_+_75491154_75491302_75491456_75491690_75491901_75492473_75492790_75492928_75493103_75493490_75493594_75493698_75493917_75494626_75494809_75494895_75495035_75495283_75495400_75495543_75495644_75495965_75496007_75516508_75516617_75516745_75516911_75517008_75517073_75517160_75517245_75517556_75517656_75518994_75519048_75521408_75521511_75521704_75522334_75523274_75523336_75523662_75523780_75524261
H1_mix_00039205	chr17	+	3414	9	FSM	ENSG00000182173.14	ENST00000679370.1	3414	9	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_1	144.682356820035	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTTCTTTTCTGCTGTTT	NA	False	NA	1	True	ATTAAA	-4	NA	75515943	75524723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75516387_75516745_75516911_75517008_75517073_75517160_75517245_75517556_75517656_75518994_75519048_75521408_75523336_75523662_75523780_75524261
H1_mix_00039206	chr17	+	2578	10	FSM	ENSG00000182173.14	ENST00000680528.1	2555	10	-23	0	-13	0	multi-exon	FALSE	canonical	3	357	junction_7	40.7867080745131	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGCAGAGGATGGAGCTT	NA	False	NA	NA	False	NA	NA	NA	75516512	75524420	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75516617_75516745_75516911_75517008_75517073_75517160_75517245_75517556_75517656_75518994_75519048_75521408_75521511_75521704_75523336_75523662_75523780_75524261
H1_mix_00039208	chr17	+	1127	8	NIC	ENSG00000182173.14	novel	3036	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	192.55680317501	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTTCTTTTCTGCTGTTT	-22	True	NA	1	True	ATTAAA	-4	NA	75516525	75524723	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_75516617_75516745_75516911_75517008_75517073_75517160_75517245_75517556_75517656_75519002_75519048_75523662_75523780_75524261
H1_mix_00039212	chr17	+	1393	11	FSM	ENSG00000073350.14	ENST00000578363.5	1393	11	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	210.418654116027	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGGCACGTACCTGTA	62	False	NA	11	True	AATAAA	-14	NA	75525778	75564723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75525826_75533641_75533706_75543396_75543502_75556045_75556144_75558154_75558237_75558511_75558628_75559251_75559411_75563015_75563179_75563330_75563464_75563751_75563807_75564352
H1_mix_00039213	chr17	+	3527	22	FSM	ENSG00000073350.14	ENST00000545227.6	3527	22	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_20	95.3839359540968	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGTCCACTACTTTAATA	-8	True	NA	15	True	AATAAA	-17	NA	75557804	75575208	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75558237_75558511_75558628_75559251_75559411_75563015_75563179_75563330_75563464_75563751_75563807_75564352_75564508_75568475_75568694_75568771_75568840_75568977_75569132_75569220_75569326_75569962_75570256_75570347_75570499_75570949_75571101_75571666_75571784_75571897_75572065_75573013_75573279_75573480_75573632_75573951_75573981_75574212_75574261_75574609_75574669_75574870
H1_mix_00039224	chr17	+	2000	1	FSM	ENSG00000161526.15	ENST00000584557.1	2000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCACTGGCCTCTCCTG	NA	False	NA	37	True	ATTAAA	-30	NA	75704771	75706771	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_75704800_75706800
H1_mix_00039240	chr17	+	1191	5	FSM	ENSG00000181038.14	ENST00000588783.5	1184	5	-7	0	-3	0	multi-exon	FALSE	canonical	2	6	junction_4	71.175838597097	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAACCTCAAGAAAAGTGC	-17	True	NA	NA	False	ATTAAA	-32	NA	76726835	76733936	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_76727179_76729689_76729795_76732977_76733216_76733292_76733382_76733520
H1_mix_00039242	chr17	+	1292	4	ISM	ENSG00000181038.14	ENST00000615984.4	1171	5	21	1	0	0	intron_retention	FALSE	canonical	3	20	junction_1	73.6176307385368	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGGATTGTTCCTTAGT	-2	True	NA	NA	False	ATTAAA	-15	NA	76726850	76733878	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_76727214_76729689_76729795_76732977_76733216_76733292
H1_mix_00039243	chr17	+	1016	4	NIC	ENSG00000181038.14	novel	925	5	NA	NA	0	0	intron_retention	FALSE	canonical	2	6	junction_3	81.6374097253622	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGATTGTTCCTTAGTCA	-3	True	NA	NA	False	ATTAAA	-17	NA	76726849	76733880	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_76727179_76732977_76733216_76733292_76733382_76733520
H1_mix_00039257	chr17	+	5250	19	NNC	ENSG00000129657.16	novel	2908	18	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_17	49.2815043060443	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGAATGTCTTTTTCTT	34	True	NA	NA	False	AATAAA	-16	NA	77141031	77217096	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_77141108_77142645_77142751_77143566_77143660_77190802_77190953_77191180_77191313_77193420_77193550_77194676_77194912_77196201_77196312_77200483_77200674_77203569_77203659_77205275_77205347_77206228_77206401_77206727_77206863_77209341_77209477_77211949_77212202_77213313_77213493_77213917_77216102_77216257_77216388_77216413
H1_mix_00039260	chr17	+	3716	12	FSM	ENSG00000184640.20	ENST00000449803.6	3996	12	277	3	219	-3	multi-exon	FALSE	canonical	2	4	junction_1	231.720942172524	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGAAGGCTCCTGAGTGA	182	False	NA	29	True	AATAAA	-18	NA	77288167	77500589	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_77288211_77307140_77307198_77402058_77402704_77482143_77482336_77487423_77487553_77488239_77488322_77488726_77488865_77490741_77490860_77492620_77492717_77492979_77493077_77497314_77497367_77498522
H1_mix_00039262	chr17	+	1255	4	NIC	ENSG00000078687.17	novel	7093	23	NA	NA	-594	-36837	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	21.7715410570772	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCCCTGTTCTCAAAGAGA	29	False	NA	1	True	AATAAA	-16	NA	77958645	78012512	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_77959269_78004169_78004270_78005057_78005080_78012002
H1_mix_00039266	chr17	+	1554	3	FSM	ENSG00000108639.8	ENST00000588282.5	1553	3	-1	0	0	0	multi-exon	FALSE	canonical	3	995	junction_2	84	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTCCAGTCATTGGTTGA	25	False	NA	28	True	AATAAA	-14	NA	78168609	78172719	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_78168716_78170816_78171055_78171509
H1_mix_00039267	chr17	+	2239	4	FSM	ENSG00000108639.8	ENST00000590201.1	2239	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	462.713974526621	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACAGTGCCTCTTCCTTCC	9	True	NA	NA	False	NA	NA	NA	78169157	78173527	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_78169230_78170816_78171055_78171509_78171650_78171738
H1_mix_00039270	chr17	+	1095	5	NIC	ENSG00000183077.16	novel	1686	11	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_4	37.3187285421141	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCTCGTTCATTTACGT	15	False	NA	25	True	AATAAA	-18	NA	78187375	78207702	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_78187434_78190969_78191061_78202498_78202604_78202702_78202752_78206910
H1_mix_00039272	chr17	+	2770	5	FSM	ENSG00000089685.15	ENST00000590925.6	648	5	-41	-2081	-31	0	multi-exon	FALSE	canonical	3	8	junction_3	842.665710706209	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTTCTTTTTCTTT	NA	False	NA	26	True	AATAAA	-21	NA	78214221	78225635	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_78214428_78214679_78214790_78216663_78216782_78222827_78222993_78223464
H1_mix_00039276	chr17	+	2054	9	FSM	ENSG00000087157.19	ENST00000589426.5	2033	9	-21	0	-13	0	multi-exon	FALSE	canonical	3	56	junction_2	137.997225968495	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATATTGCCTTTAACCA	-18	True	NA	4	True	AATATA	-18	NA	78378635	78424554	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_78378809_78392475_78392666_78398251_78398352_78399347_78399538_78400676_78400856_78403567_78404090_78414951_78415028_78419545_78419676_78424060
H1_mix_00039288	chr17	+	3594	21	NIC	ENSG00000171298.13	novel	3549	21	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	55.1882913306799	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCGGGTCTCTCTGGG	4	True	NA	13	True	AATAAA	-19	NA	80101587	80119881	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_80101626_80101810_80101926_80104554_80105133_80105748_80105895_80107556_80107723_80107799_80107897_80108289_80108410_80108488_80108608_80108696_80108829_80109944_80110056_80110726_80110841_80110940_80111026_80111982_80112101_80112577_80112712_80112875_80113028_80113217_80113367_80116967_80117110_80117599_80117750_80118192_80118358_80118652_80118806_80119271
H1_mix_00039290	chr17	+	2408	8	NIC	ENSG00000171298.13	novel	3549	21	NA	NA	88	0	intron_retention	FALSE	canonical	3	210	junction_4	19.0627320996241	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCTTCTGCGGGTCTCTC	1867	False	NA	9	True	AATAAA	-15	NA	80111820	80119877	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_80112712_80112875_80113028_80113217_80113367_80116967_80117110_80117599_80117750_80118192_80118358_80118652_80118806_80119271
H1_mix_00039291	chr17	+	2550	5	NIC	ENSG00000171298.13	novel	3549	21	NA	NA	115	0	intron_retention	FALSE	canonical	3	210	junction_2	21.9715725427198	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCTTCTGCGGGTCTCTC	2545	False	NA	9	True	AATAAA	-15	NA	80112498	80119877	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_80113367_80116967_80117110_80117599_80117750_80118192_80118358_80118652
H1_mix_00039304	chr17	+	2759	10	FSM	ENSG00000173818.17	ENST00000518137.6	2820	10	-3	64	-1	-59	multi-exon	FALSE	canonical	0	0	junction_3	33.7704670451038	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGACCTGGGTCTAGGAT	-13	True	NA	-58	True	NA	NA	NA	80415163	80438022	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_80415251_80415649_80415822_80421827_80421963_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772_80429832_80436132
H1_mix_00039305	chr17	+	1008	9	NIC	ENSG00000173818.17	novel	2680	9	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_2	16.1322658049017	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTCTCAGGATTCATT	14	True	NA	25	True	AATAGA	-22	NA	80415190	80430341	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_80415251_80415649_80415822_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772_80429832_80430040
H1_mix_00039311	chr17	+	1448	8	ISM	ENSG00000173818.17	ENST00000518137.6	2820	10	327	7745	7	0	internal_fragment	FALSE	canonical	0	0	junction_2	31.2043952948024	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTCTCAGGATTCATT	26	False	NA	25	True	AATAGA	-22	NA	80415493	80430341	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_80415822_80421827_80421963_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772
H1_mix_00039314	chr17	+	5734	30	FSM	ENSG00000141564.15	ENST00000544334.6	5734	30	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_13	10.6201298553768	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCGCGGCTGGCGGCTGTG	36	False	NA	8	True	AGTAAA	-14	NA	80545467	80966368	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_80545792_80625690_80625794_80643727_80643811_80707840_80708000_80730559_80730707_80754009_80754186_80791449_80791510_80822200_80822302_80823078_80823224_80837921_80837998_80846472_80846575_80855463_80855548_80857789_80857901_80891719_80891838_80892728_80892870_80893706_80893866_80908810_80908930_80922723_80922828_80923489_80923674_80925369_80925481_80940495_80940602_80945666_80945782_80947226_80947352_80949442_80949548_80957623_80957731_80960077_80960206_80961393_80961481_80962460_80962578_80962927_80963058_80964261
H1_mix_00039315	chr17	+	4508	19	NIC	ENSG00000141564.15	novel	5536	30	NA	NA	-39471	-9	combination_of_known_splicesites	FALSE	canonical	3	12	junction_9	10.5211427347244	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCGCAGACTCCGCGGCTG	9367	False	NA	-1	True	AGTAAA	-5	NA	80883252	80966359	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_80883485_80883780_80883973_80885007_80885149_80891719_80891838_80892728_80892870_80893706_80893866_80908810_80908930_80922723_80922828_80923489_80923674_80940495_80940602_80945666_80945782_80947226_80947352_80949442_80949548_80957623_80957731_80960077_80960206_80961393_80961481_80962460_80962578_80962927_80963058_80964261
H1_mix_00039316	chr17	+	708	6	FSM	ENSG00000176108.9	ENST00000572778.5	737	6	0	29	0	-29	multi-exon	FALSE	canonical	3	236	junction_3	13.3056379027839	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAGAGACACATTCAGAAA	2671	False	NA	NA	False	NA	NA	NA	80994580	80998641	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_80994691_80995018_80995107_80995671_80995759_80997006_80997073_80997260_80997342_80998365
H1_mix_00039329	chr17	+	499	3	FSM	ENSG00000141552.18	ENST00000583839.1	499	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	1898	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGGCCTCTGGGTGCC	43	False	NA	23	True	ATTAAA	-14	NA	81892062	81900254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81892107_81894466_81894587_81899919
H1_mix_00039331	chr17	+	1781	15	FSM	ENSG00000169696.16	ENST00000580534.5	1776	15	-5	0	0	0	multi-exon	TRUE	canonical	2	11	junction_10	150.552994263258	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGCCTTCCTGTCATGCTT	10	True	NA	19	True	AATAAA	-17	NA	81977628	82017404	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81977749_81983553_81983669_81985506_81985608_81994820_81994879_81995991_81996066_81996419_81996847_82009036_82009192_82009485_82009568_82010801_82010869_82011542_82011606_82012155_82012284_82016475_82016528_82016799_82016870_82016940_82017114_82017308
H1_mix_00039332	chr17	+	3277	8	FSM	ENSG00000169696.16	ENST00000578236.5	3277	8	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_7	25.8591159468188	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGCCTTCCTGTCATGCTT	9135	False	NA	19	True	AATAAA	-17	NA	82006641	82017404	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_82009192_82009485_82009568_82010801_82010869_82011542_82011606_82012230_82012284_82016475_82016528_82016799_82017114_82017308
H1_mix_00039345	chr17	+	1969	15	FSM	ENSG00000169660.17	ENST00000578775.2	1969	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	32.0886050090772	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAATAAAGAGTGGAAGCT	292	False	NA	-8	True	NA	NA	NA	82418686	82442617	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_82418741_82419748_82419884_82424393_82424504_82428029_82428128_82428557_82428646_82433657_82433823_82435688_82435873_82436666_82436739_82437167_82437364_82439630_82439714_82440262_82440335_82440996_82441076_82441164_82441267_82441799_82441890_82442176
H1_mix_00039346	chr17	+	1824	9	FSM	ENSG00000169660.17	ENST00000582429.5	1824	9	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_5	24.2886290267689	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAACACAGAAGGAAGCAG	8475	False	NA	-75	True	NA	NA	NA	82433799	82442550	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_82433823_82435688_82435873_82436666_82436739_82437167_82437364_82439630_82440335_82440996_82441076_82441164_82441267_82441799_82441890_82442176
H1_mix_00039351	chr17	+	5235	3	ISM	ENSG00000141568.21	ENST00000335255.10	5243	9	64818	-74	-1580	74	3prime_fragment	FALSE	canonical	3	145	junction_2	5	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGCGCATTGGCAAGAAC	NA	False	NA	84	True	NA	NA	NA	82584549	82604676	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_82586201_82587062_82587273_82601302
H1_mix_00039353	chr17	+	5557	1	FSM	ENSG00000141568.21	ENST00000624186.1	4244	1	107	-1420	107	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATGCAGAGTATCATTT	NA	False	NA	10	True	AATAAA	-20	NA	82599045	82604602	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_82599000_82604600
H1_mix_00039362	chr17	-	1798	10	NNC	ENSG00000167699.14	novel	1765	9	NA	NA	0	67632	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	261.460050532947	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTCCAGCATGGTGGCAC	4	True	NA	NA	False	NA	NA	NA	782276	689464	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_689492_759319_760239_769868_769956_770043_770158_770420_770508_771324_771462_775774_775920_776867_776989_778694_778745_782165
H1_mix_00039364	chr17	-	836	1	FSM	ENSG00000262228.3	ENST00000570809.1	1755	1	831	88	831	-88	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCAAGCTTGGCCCAGAT	NA	False	NA	NA	False	NA	NA	NA	764488	763652	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_763700_764500
H1_mix_00039368	chr17	-	1159	6	FSM	ENSG00000167693.17	ENST00000571684.5	1159	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	175.725240076661	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTTCTAAGCAACACAGT	NA	False	NA	NA	False	NA	NA	NA	826001	800480	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_801132_803681_803807_819438_819546_822356_822458_823631_823766_825960
H1_mix_00039369	chr17	-	507	3	FSM	ENSG00000167693.17	ENST00000574018.1	508	3	1	0	1	0	multi-exon	FALSE	canonical	1	1	junction_2	231	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGGGTGTGGAATCAGC	NA	False	NA	-33	True	AGTAAA	-15	NA	805247	800787	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_801132_803681_803807_805209
H1_mix_00039370	chr17	-	246	2	FSM	ENSG00000167693.17	ENST00000575171.1	544	2	0	298	0	-298	multi-exon	FALSE	canonical	3	456	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGAAATAGATACACGTGG	1775	False	NA	NA	False	NA	NA	NA	979349	825863	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_826079_979318
H1_mix_00039375	chr17	-	1764	8	NNC	ENSG00000108953.17	novel	1818	7	NA	NA	0	108255	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4774.11696718111	2280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTAGAAAAGGCAAGACTG	47	False	NA	NA	False	NA	NA	NA	1400151	1236019	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_1236047_1254674_1254702_1344545_1345500_1354210_1354348_1361091_1361299_1361901_1362009_1364858_1365059_1400046
H1_mix_00039378	chr17	-	2880	13	FSM	ENSG00000132376.20	ENST00000320345.10	2880	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_11	57.6374564748384	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGTGCTTGTCCTGCCA	10	True	NA	NA	False	NA	NA	NA	1516735	1494756	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1495880_1496059_1496165_1496318_1496403_1496665_1496804_1497935_1498123_1506979_1507090_1508114_1508227_1509177_1509354_1509682_1509800_1513452_1513562_1513871_1513980_1515887_1516119_1516455
H1_mix_00039391	chr17	-	4113	14	NIC	ENSG00000167703.15	novel	8133	14	NA	NA	3	900	intron_retention	FALSE	canonical	3	7	junction_13	19.0632705489816	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCAACGCTCATGAGCTC	547	False	NA	NA	False	NA	NA	NA	1628338	1573471	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_1575766_1576596_1576721_1578249_1578324_1583203_1583337_1585912_1586052_1590801_1590949_1591268_1591472_1591565_1591700_1593186_1593280_1613194_1613272_1614978_1615035_1616561_1616770_1627714_1627921_1628113
H1_mix_00039392	chr17	-	1400	10	FSM	ENSG00000167703.15	ENST00000572135.5	2074	10	0	674	0	-674	multi-exon	FALSE	canonical	3	7	junction_9	22.126460334034	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGTAGGCAGGGCCGGTG	635	False	NA	NA	False	NA	NA	NA	1628250	1585912	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1586052_1590801_1590949_1591268_1591472_1591565_1591700_1593186_1593280_1613194_1613272_1614978_1615035_1616561_1616770_1627714_1627921_1628113
H1_mix_00039393	chr17	-	1341	10	FSM	ENSG00000167703.15	ENST00000574743.5	2030	10	15	674	15	-674	multi-exon	FALSE	canonical	3	46	junction_9	11.163211184539	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGTAGGCAGGGCCGGTG	14	True	NA	NA	False	NA	NA	NA	1628871	1585912	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1586052_1590801_1590949_1591268_1591472_1591565_1591700_1593186_1593280_1613194_1613272_1614978_1615035_1616561_1616770_1627714_1627921_1628793
H1_mix_00039400	chr17	-	525	3	FSM	ENSG00000186594.15	ENST00000690262.1	1326	3	36	765	0	92	multi-exon	FALSE	canonical	1	1	junction_1	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACACAGGAAATTCATAAAAG	0	True	NA	NA	False	NA	NA	NA	1716211	1712268	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1712400_1713702_1714015_1716129
H1_mix_00039402	chr17	-	387	4	FSM	ENSG00000167721.11	ENST00000575049.1	387	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	275.132695258124	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGGGTATGAAGGAGGAG	6430	False	NA	NA	False	NA	NA	NA	2330966	2324690	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_2324830_2325303_2325421_2330514_2330626_2330946
H1_mix_00039404	chr17	-	2813	1	FSM	ENSG00000070444.15	ENST00000575402.1	2813	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGGGAGAGTGGGGGAGG	9004	False	NA	NA	False	AGTAAA	-10	NA	2392078	2389265	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_2389300_2392100
H1_mix_00039405	chr17	-	378	1	ISM	ENSG00000127804.13	ENST00000571332.5	2644	3	10122	24	9886	-24	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGAAATGGATCTTCTC	2381	False	NA	NA	False	AATAAA	-3	NA	2405963	2405585	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_2405600_2406000
H1_mix_00039406	chr17	-	269	1	FSM	ENSG00000279872.1	ENST00000625037.1	234	1	13	-48	13	48	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAATAAAATAATA	NA	False	NA	NA	False	NA	NA	NA	2424399	2424130	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_2424100_2424400
H1_mix_00039408	chr17	-	1243	9	FSM	ENSG00000132361.18	ENST00000574210.5	1243	9	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_4	9.32402809948576	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCGCCCTGTCACCCGGG	8485	False	NA	NA	False	NA	NA	NA	2694949	2691552	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_2691683_2691760_2691896_2692003_2692098_2692360_2692483_2692570_2692697_2692779_2692861_2693899_2694277_2694479_2694565_2694856
H1_mix_00039412	chr17	-	547	4	FSM	ENSG00000261848.5	ENST00000572821.5	534	4	10	-23	10	23	multi-exon	FALSE	canonical	2	3	junction_2	1.24721912892465	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGGTAGAAAAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	3176925	3134945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_3135191_3160233_3160289_3163692_3163890_3176875
H1_mix_00039415	chr17	-	1265	3	FSM	ENSG00000213977.8	ENST00000611779.4	1302	3	38	-1	38	0	multi-exon	FALSE	canonical	2	9	junction_1	174.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGGGCTTTGCTGAGGCA	-1	False	NA	-6	True	AATAAA	-15	NA	3668641	3662894	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_3663886_3664678_3664799_3668487
H1_mix_00039416	chr17	-	1642	12	FSM	ENSG00000083454.22	ENST00000552276.5	1642	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	24.0577816829427	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCCTTCCAATCTAAAACA	313	False	NA	NA	False	NA	NA	NA	3696096	3672198	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_3672494_3679589_3679785_3681895_3681979_3688011_3688106_3688625_3688760_3689491_3689628_3690069_3690151_3690426_3690524_3690604_3690681_3690955_3691028_3691643_3691795_3695868
H1_mix_00039417	chr17	-	875	3	FSM	ENSG00000083454.22	ENST00000552456.1	851	3	0	-24	0	0	multi-exon	FALSE	canonical	0	0	junction_2	34	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTCCTGATTTTTTTCTC	8369	False	NA	-4	True	AATAAA	-17	NA	3688040	3673226	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_3673878_3679589_3679785_3688011
H1_mix_00039418	chr17	-	752	3	FSM	ENSG00000083457.12	ENST00000572433.5	731	3	0	-21	0	13	multi-exon	FALSE	canonical	3	588	junction_2	1.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGGAAATACAGTATTACT	3184	False	NA	2	True	AATAAA	-32	NA	3720619	3714614	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_3714943_3716687_3716799_3720306
H1_mix_00039420	chr17	-	2701	8	FSM	ENSG00000074356.17	ENST00000574911.5	2701	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	99.1103281341412	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGTCCCATATTTTG	0	True	NA	NA	False	AATAAA	-41	NA	3825021	3811522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_3813280_3814321_3814484_3816115_3816271_3818262_3818573_3821248_3821353_3821952_3822053_3824059_3824093_3824941
H1_mix_00039421	chr17	-	483	2	FSM	ENSG00000074370.18	ENST00000574999.1	776	2	293	0	293	0	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGGAAGCTGGACGTTCAC	NA	False	NA	NA	False	NA	NA	NA	3928327	3925046	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_3925442_3928239
H1_mix_00039423	chr17	-	3197	21	FSM	ENSG00000074370.18	ENST00000397043.7	3197	21	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	27.167075661543	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCCACCACACTCGCCCA	789	False	NA	NA	False	NA	NA	NA	3964415	3925345	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_3925439_3928662_3928781_3929327_3929446_3930300_3930435_3935191_3935278_3936266_3936470_3937415_3937637_3940970_3941307_3941435_3941655_3942605_3942732_3943390_3943523_3944703_3944807_3945059_3945149_3947390_3947856_3950510_3950597_3950692_3950774_3951250_3951390_3951580_3951686_3953346_3953430_3953692_3953711_3964173
H1_mix_00039426	chr17	-	11455	55	NIC	ENSG00000074755.15	novel	11466	55	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_39	6.6640941538691	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGTGTGTGGACTGGTC	-7	True	NA	-13	True	AATATA	-27	NA	4143016	4004444	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_4006971_4008882_4008955_4009603_4009758_4013448_4013615_4014089_4014189_4014346_4014516_4016322_4016467_4017370_4017731_4017835_4017972_4019668_4019770_4021128_4021321_4022708_4022829_4024918_4025119_4032125_4032259_4032827_4033003_4034014_4034293_4042428_4042569_4044223_4044375_4049707_4049860_4050780_4051044_4051970_4052137_4054056_4054196_4056215_4056346_4057993_4058156_4059170_4059291_4062752_4062918_4064360_4064830_4066446_4066541_4067162_4067243_4070683_4070925_4072607_4072757_4074149_4074352_4075096_4075179_4075262_4075430_4076636_4076760_4076867_4076990_4077882_4078043_4081375_4081491_4082436_4082508_4085669_4085804_4086485_4086656_4087433_4087535_4088677_4088894_4090718_4090831_4095830_4095980_4096608_4096701_4102316_4102416_4104632_4104812_4105692_4105810_4109652_4109864_4112608_4112809_4114298_4114471_4116971_4117167_4123906_4124052_4142541
H1_mix_00039427	chr17	-	6004	5	NIC	ENSG00000185722.18	novel	7506	25	NA	NA	-3220	0	intron_retention	FALSE	canonical	3	124	junction_4	12.8937969582276	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTGACGTGAATAAGTTT	NA	False	NA	-4	True	ATTAAA	-17	NA	4174081	4163820	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_4169289_4170714_4170862_4172555_4172681_4173353_4173445_4173908
H1_mix_00039428	chr17	-	3352	24	FSM	ENSG00000185722.18	ENST00000572412.5	3352	24	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_22	36.2454873014069	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGCGGGTTTGCAACAT	11	True	NA	NA	False	TATAAA	-17	NA	4263956	4167835	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4167912_4169197_4169289_4170714_4170862_4172555_4172681_4173353_4173445_4173908_4174057_4177125_4177303_4178856_4179058_4179720_4179878_4181253_4181373_4182180_4182353_4183397_4183552_4183811_4183911_4184817_4185047_4189381_4189480_4194977_4195178_4195402_4195472_4197372_4197578_4206320_4206487_4207932_4208083_4209823_4209948_4216982_4217119_4242255_4242449_4263931
H1_mix_00039429	chr17	-	558	1	FSM	ENSG00000185722.18	ENST00000572564.1	2555	1	-6	2003	-6	1141	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCAGTGGCTGTGACGTG	6667	False	NA	NA	False	TTTAAA	-13	NA	4180442	4179884	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4179900_4180400
H1_mix_00039431	chr17	-	863	4	FSM	ENSG00000132388.13	ENST00000574633.5	863	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	627.563719651019	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTACCAAATAATGCTTT	31	True	NA	-62	True	AATATA	-31	NA	4366625	4272235	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4272517_4282797_4282922_4307020_4307124_4366270
H1_mix_00039432	chr17	-	553	5	FSM	ENSG00000132388.13	ENST00000571953.5	553	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	519.051057218844	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAGAATTTAAAAGAAAAG	NA	False	NA	-5	True	NA	NA	NA	4331923	4282898	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4282922_4289229_4289409_4296716_4296815_4307020_4307124_4331773
H1_mix_00039434	chr17	-	3415	18	NNC	ENSG00000141456.16	novel	5084	17	NA	NA	0	79835	intron_retention	FALSE	non_canonical	0	0	junction_1	216.179135637834	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGTGCGTCCAAAGGCA	8580	False	NA	NA	False	NA	NA	NA	4704040	4589938	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_4589985_4671391_4671532_4671690_4673146_4673249_4673457_4673618_4673675_4674509_4674670_4674808_4674957_4675078_4675196_4675273_4675363_4675796_4675885_4676035_4676163_4676356_4676508_4676752_4676813_4682501_4682574_4682802_4682953_4690887_4690994_4691377_4691443_4703862
H1_mix_00039438	chr17	-	553	2	FSM	ENSG00000262165.2	ENST00000571067.1	562	2	10	-1	10	1	multi-exon	FALSE	canonical	1	2	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTGTGTGTGTGTGCTG	1	True	NA	1	True	NA	NA	NA	4807003	4801157	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4801456_4806748
H1_mix_00039439	chr17	-	1612	4	FSM	ENSG00000108556.10	ENST00000652550.1	2173	4	0	561	0	-247	multi-exon	TRUE	canonical	1	1	junction_1	0.471404520791032	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTTCCCTGGTCTGGCT	2860	False	NA	NA	False	NA	NA	NA	4900229	4898331	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4898888_4899000_4899108_4899197_4899385_4899467
H1_mix_00039440	chr17	-	1368	9	NNC	ENSG00000108528.14	novel	1692	8	NA	NA	47	11898	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	360.351369325829	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGAAGATGCCGGGCGTGG	9993	False	NA	NA	False	AAAAAG	-8	NA	4939866	4925231	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_4925270_4937311_4937897_4938022_4938075_4938153_4938254_4938338_4938430_4938511_4938603_4938768_4938976_4939059_4939213_4939815
H1_mix_00039441	chr17	-	870	4	NNC	ENSG00000108518.8	novel	807	3	NA	NA	-25	20420	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	13425.628948644	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGAAGATGCCGGGCGTGG	1929	False	NA	NA	False	AAAAAG	-8	NA	4948555	4925231	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_4925270_4945651_4945998_4946627_4946821_4948262
H1_mix_00039442	chr17	-	891	5	NNC	ENSG00000108518.8	novel	807	3	NA	NA	93	20420	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14043.9212717638	290	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGAAGATGCCGGGCGTGG	18	True	NA	NA	False	AAAAAG	-8	NA	4948968	4925231	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_4925272_4945657_4945998_4946627_4946821_4948262_4948556_4948943
H1_mix_00039443	chr17	-	2176	6	FSM	ENSG00000108528.14	ENST00000574710.1	2176	6	0	0	0	0	multi-exon	FALSE	canonical	3	1028	junction_5	63.7915354886524	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCAGCCCCAAATCTGGAG	27	True	NA	-10	True	AATAAA	-13	NA	4940030	4937316	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4937897_4938022_4938075_4938153_4938254_4938338_4938430_4938511_4938603_4938768
H1_mix_00039446	chr17	-	935	4	NIC	ENSG00000108518.8	novel	539	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	789	junction_3	13053.8259014998	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTCTACTAACAAGGTGC	16	True	NA	-31	True	AATAAA	-3	NA	4949061	4945666	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_4945998_4946627_4946821_4948262_4948556_4948943
H1_mix_00039448	chr17	-	539	3	FSM	ENSG00000108518.8	ENST00000572383.1	539	3	0	0	0	0	multi-exon	FALSE	canonical	3	789	junction_2	13622	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCGTACCAAGAGCACCG	16	True	NA	NA	False	NA	NA	NA	4949061	4946692	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4946821_4948262_4948556_4948943
H1_mix_00039449	chr17	-	1668	7	FSM	ENSG00000091640.8	ENST00000573366.5	1668	7	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_6	344.192492977726	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTACATTCAATAAATACTG	5575	False	NA	-32	True	GGGGCT	-8	NA	4967191	4959255	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4959644_4959759_4959917_4960021_4960112_4960233_4960319_4960458_4960548_4960785_4960854_4966400
H1_mix_00039451	chr17	-	579	2	FSM	ENSG00000091640.8	ENST00000571023.1	579	2	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTAGCTGGGCTTGGT	11	True	NA	NA	False	AATAAA	-34	NA	4967808	4965829	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4966320_4967719
H1_mix_00039452	chr17	-	856	2	FSM	ENSG00000108509.21	ENST00000572192.1	856	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTAAGGCGCCGCGGGGA	1	True	NA	NA	False	NA	NA	NA	4969081	4968138	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4968820_4968906
H1_mix_00039453	chr17	-	872	5	FSM	ENSG00000108509.21	ENST00000576872.1	985	5	0	113	0	-113	multi-exon	FALSE	canonical	3	50	junction_3	8.52569645248997	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCTTCTCTCTCCACAAG	9035	False	NA	NA	False	NA	NA	NA	4972793	4969540	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4969702_4969901_4970086_4970339_4970537_4972231_4972537_4972768
H1_mix_00039454	chr17	-	3477	16	ISM	ENSG00000108509.21	ENST00000348066.8	4515	23	-5	3718	-5	1236	5prime_fragment	FALSE	canonical	3	36	junction_11	16.5738750246686	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGTCTCAAAAAAAAAAAAAA	-23	True	NA	NA	False	NA	NA	NA	4987680	4971714	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_4972537_4972768_4972992_4973174_4973254_4973584_4973770_4974384_4974501_4977057_4977193_4978503_4978631_4979683_4980622_4981224_4981360_4981677_4981832_4982088_4982161_4982756_4982893_4982975_4983044_4985879_4985984_4986191_4986287_4987592
H1_mix_00039457	chr17	-	1611	2	NNC	ENSG00000167840.13	novel	1907	3	NA	NA	2007	3436	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTAAATGTAATTAATTCT	4545	False	NA	NA	False	NA	NA	NA	5107318	5102104	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_5102133_5105735
H1_mix_00039458	chr17	-	2179	5	FSM	ENSG00000167840.13	ENST00000250076.7	2179	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	60.9441342542496	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGCTTTGGATGCAAGTA	16	False	NA	-22	True	NA	NA	NA	5123102	5105634	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_5106534_5108925_5109053_5109393_5109869_5111799_5112352_5122976
H1_mix_00039459	chr17	-	1288	3	NIC	ENSG00000167840.13	novel	1553	5	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	3	40	junction_1	22.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGGACTGGATCCCATAAA	12	True	NA	-43	True	NA	NA	NA	5111851	5105772	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_5106534_5109393_5109869_5111799
H1_mix_00039465	chr17	-	1092	7	NNC	ENSG00000072849.11	novel	4167	7	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_6	306.122751341498	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTTTCTCTCACTGTA	13	True	NA	-53	True	AATAAA	-8	NA	5486162	5474309	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_5474790_5480053_5480145_5480386_5480583_5481295_5481390_5482808_5482883_5485150_5485214_5486068
H1_mix_00039470	chr17	-	621	3	FSM	ENSG00000091622.16	ENST00000575201.2	734	3	0	113	0	-113	multi-exon	FALSE	canonical	2	2	junction_1	5.5	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTTTACACTTTCAAATG	7467	False	NA	NA	False	NA	NA	NA	6463881	6460681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_6460969_6461372_6461557_6463731
H1_mix_00039471	chr17	-	6030	19	NIC	ENSG00000198920.11	novel	4647	19	NA	NA	-1685	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_18	10.0234293434168	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGAGCATTGCTCTCCGTG	4030	False	NA	-16	True	AATAAA	-24	NA	6636858	6578146	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_6579865_6589778_6590004_6590509_6590631_6594971_6595054_6596157_6596344_6599236_6599321_6600379_6600459_6606872_6606963_6607180_6607271_6608347_6608465_6609993_6610161_6611918_6612149_6620787_6620999_6622881_6623098_6623508_6623572_6624754_6624862_6628116_6628742_6635010_6635172_6635400
H1_mix_00039472	chr17	-	3401	17	FSM	ENSG00000198920.11	ENST00000570790.5	3403	17	2	0	2	0	multi-exon	TRUE	canonical	0	0	junction_15	10.6448344280219	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCTGCAGTTTATTCC	5717	False	NA	NA	False	NA	NA	NA	6635171	6579210	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_6579865_6589778_6590004_6590509_6590631_6594971_6595054_6596157_6596344_6599236_6599321_6600379_6600459_6606872_6606963_6607180_6607271_6608347_6608465_6609993_6610161_6611918_6612149_6620787_6620999_6622881_6623098_6623508_6623572_6628116_6628742_6635010
H1_mix_00039473	chr17	-	430	2	FSM	ENSG00000198920.11	ENST00000570455.1	447	2	0	17	0	-17	multi-exon	FALSE	canonical	3	22	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATACTATTCTTATACCAT	236	False	NA	NA	False	AATGAA	-17	NA	6640652	6634757	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_6635172_6640636
H1_mix_00039474	chr17	-	4569	3	ISM	ENSG00000108590.11	ENST00000225728.8	1629	4	0	2382	0	-1398	5prime_fragment	FALSE	canonical	3	104	junction_1	25.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTAGTGTGGACTTTTGG	-17	True	NA	-5	True	ATTAAA	-13	NA	6651605	6645692	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_6650079_6650355_6650434_6651500
H1_mix_00039475	chr17	-	3231	12	FSM	ENSG00000141485.17	ENST00000433363.7	3231	12	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_10	4.51809950537788	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCACTGTGCTGCTGACT	-2	True	NA	-11	True	ATTAAA	-21	NA	6713369	6684718	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_6686339_6687528_6687667_6690778_6690941_6693043_6693163_6694096_6694198_6695725_6695942_6701003_6701127_6702969_6703139_6703877_6704057_6706641_6706779_6707027_6707157_6713231
H1_mix_00039476	chr17	-	531	1	FSM	ENSG00000262503.1	ENST00000572223.1	720	1	195	-6	195	6	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCCATTTCATCATCTTT	9127	False	NA	NA	False	AATATA	-2	NA	6927996	6927465	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_6927500_6928000
H1_mix_00039477	chr17	-	880	3	FSM	ENSG00000215067.11	ENST00000399540.2	1730	3	9	841	1	307	multi-exon	FALSE	canonical	2	3	junction_1	5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATAAACTTAATTAAAATC	7	True	NA	-33	True	ACTAAA	-3	NA	7012333	7001972	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7002621_7009795_7009890_7012195
H1_mix_00039478	chr17	-	786	2	FSM	ENSG00000215067.11	ENST00000573939.1	495	2	16	-307	1	307	multi-exon	FALSE	canonical	2	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATAAACTTAATTAAAATC	7	True	NA	-33	True	ACTAAA	-3	NA	7012333	7001972	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7002621_7012195
H1_mix_00039479	chr17	-	2063	1	FSM	ENSG00000267532.5	ENST00000572453.1	3838	1	2045	-270	2016	266	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACACCCCTTTCCACCATC	2037	False	NA	NA	False	AAGAAA	-20	NA	7017614	7015551	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7015600_7017600
H1_mix_00039480	chr17	-	754	2	FSM	ENSG00000174326.15	ENST00000573338.1	927	2	173	0	173	0	multi-exon	FALSE	canonical	3	10	junction_1	0	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCCCCAATAAAGAATTTT	659	False	NA	NA	False	NA	NA	NA	7043433	7041658	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7041909_7042929
H1_mix_00039481	chr17	-	1186	7	ISM	ENSG00000141505.12	ENST00000380920.8	944	8	638	-122	4	0	3prime_fragment	FALSE	canonical	3	17	junction_6	7.0099136149377	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGTTAGTTGTCTGGT	2074	False	NA	-5	True	AGTAAA	-17	NA	7177478	7173430	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_7173834_7173960_7174068_7174137_7174290_7174373_7174461_7176829_7176902_7176980_7177077_7177209
H1_mix_00039482	chr17	-	1078	8	NNC	ENSG00000141505.12	novel	1310	9	NA	NA	-55	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_7	9.58740670603572	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGTTAGTTGTCTGGT	-4	True	NA	-5	True	AGTAAA	-17	NA	7178171	7173430	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_7173834_7173960_7174068_7174137_7174290_7174373_7174461_7176829_7176902_7176980_7177077_7177209_7177327_7178127
H1_mix_00039486	chr17	-	2977	15	NIC	ENSG00000004975.12	novel	2989	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	208	junction_11	93.1717746521807	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACGCCTCTGGCTCCTTT	-16	True	NA	-7	True	AATAAA	-18	NA	7234517	7225341	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_7226314_7226420_7226640_7227089_7227270_7227403_7227536_7227654_7227784_7227976_7228045_7228968_7229046_7229134_7229275_7229377_7229448_7229587_7229679_7229807_7229944_7230057_7230156_7230284_7230431_7230727_7230798_7234068
H1_mix_00039487	chr17	-	900	7	FSM	ENSG00000004975.12	ENST00000575086.1	900	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	200.190742376698	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCAGAGGCTCAACTGGG	9219	False	NA	NA	False	NA	NA	NA	7229035	7226136	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7226314_7226420_7226640_7227089_7227270_7227403_7227536_7227654_7227712_7227976_7228045_7228968
H1_mix_00039492	chr17	-	1769	5	FSM	ENSG00000040633.13	ENST00000571362.5	1768	5	0	-1	0	1	multi-exon	FALSE	canonical	3	57	junction_2	253.626078115008	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCACTGTCCTGCTCGG	4	True	NA	-3	True	AATAAA	-27	NA	7239439	7235027	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7235841_7235929_7236567_7237384_7237478_7237628_7237661_7239245
H1_mix_00039493	chr17	-	1662	5	FSM	ENSG00000040633.13	ENST00000454255.6	1662	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	278.172046582686	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTCCCCTCCCTCATCT	4071	False	NA	-28	True	TATAAA	-18	NA	7238930	7235286	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7235841_7235929_7236768_7237384_7237478_7237628_7237661_7238785
H1_mix_00039495	chr17	-	742	2	FSM	ENSG00000175826.12	ENST00000570484.1	393	2	174	-523	174	0	multi-exon	FALSE	canonical	3	632	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATGCATTATAACTTTGA	7828	False	NA	17	True	NA	NA	NA	7244664	7243617	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7244246_7244550
H1_mix_00039499	chr17	-	1238	10	FSM	ENSG00000132522.16	ENST00000570780.5	1238	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	302.889826361963	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTAGTAGGCCCAGGGAG	2	True	NA	NA	False	NA	NA	NA	7315123	7311323	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7311591_7313028_7313125_7313211_7313292_7313379_7313470_7313567_7313722_7313905_7313989_7314079_7314160_7314290_7314404_7314487_7314598_7314958
H1_mix_00039500	chr17	-	1534	9	FSM	ENSG00000132522.16	ENST00000572172.5	1534	9	0	0	0	0	multi-exon	FALSE	canonical	3	778	junction_7	90.1550747323743	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCTGCTGCTGTTTGTG	31	True	NA	-6	True	AATAAA	-18	NA	7315321	7312658	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7312840_7313028_7313125_7313211_7313292_7313379_7313470_7313567_7313989_7314079_7314160_7314290_7314404_7314487_7314598_7314958
H1_mix_00039507	chr17	-	1721	7	FSM	ENSG00000187838.17	ENST00000573070.5	1740	7	19	0	-16	0	multi-exon	FALSE	canonical	3	47	junction_3	95.6302195380147	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTATGTAATAGGGGAGG	10	True	NA	-1	True	TATAAA	-26	NA	7394823	7389726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7390442_7390633_7390796_7392790_7392953_7393466_7393510_7393600_7393837_7394103_7394160_7394476
H1_mix_00039508	chr17	-	1483	6	ISM	ENSG00000187838.17	ENST00000573070.5	1740	7	572	2	-2	1	3prime_fragment	FALSE	canonical	3	47	junction_3	83.6100472431394	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATGTATGTAATAGGGGA	9826	False	NA	-3	True	TATAAA	-24	NA	7394270	7389728	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_7390442_7390633_7390796_7392790_7392953_7393466_7393510_7393600_7393837_7394103
H1_mix_00039510	chr17	-	3228	18	NNC	ENSG00000129245.12	novel	2987	17	NA	NA	-200	38208	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	67.3199251213123	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCCCTGCCTCCAGTTCC	NA	False	NA	NA	False	AAAAAG	-2	NA	7615097	7553021	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_7553065_7591231_7591926_7592253_7592355_7592503_7592600_7592693_7592895_7592983_7593182_7593402_7593626_7593917_7594005_7594237_7594348_7594678_7594758_7595823_7595995_7601408_7601526_7602908_7603003_7603756_7603906_7604008_7604081_7605644_7605739_7606096_7606150_7614451
H1_mix_00039511	chr17	-	607	1	FSM	ENSG00000276384.1	ENST00000610459.1	426	1	-192	11	-192	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCTGTTTTAAAAATCCA	3397	False	NA	-21	True	AATAAA	-5	NA	7558437	7557830	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7557800_7558400
H1_mix_00039513	chr17	-	765	2	FSM	ENSG00000141504.12	ENST00000570914.5	765	2	0	0	0	0	multi-exon	FALSE	canonical	3	397	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGGTGTTGGGTCTTT	702	False	NA	NA	False	AATAAA	-17	NA	7627139	7626236	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7626615_7626752
H1_mix_00039515	chr17	-	917	4	FSM	ENSG00000141504.12	ENST00000571195.5	814	4	-74	-29	0	0	multi-exon	FALSE	canonical	3	237	junction_2	80.8304123183567	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTTAGGGGTGCCTATCC	-35	True	NA	NA	False	NA	NA	NA	7627876	7626336	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7626615_7626752_7626794_7627142_7627227_7627362
H1_mix_00039516	chr17	-	662	5	FSM	ENSG00000141504.12	ENST00000573566.1	640	5	0	-22	0	0	multi-exon	FALSE	canonical	3	142	junction_4	114.298950126412	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATGCTGAGGCCTCCCT	36	True	NA	NA	False	NA	NA	NA	7627805	7626365	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7626615_7626752_7626794_7627142_7627227_7627362_7627415_7627569
H1_mix_00039519	chr17	-	792	2	NNC	ENSG00000141510.18	novel	1883	12	NA	NA	6009	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTGTGGGTTTTTT	9869	False	NA	-3	True	ATTAAA	-15	NA	7667578	7665414	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_7665524_7666895
H1_mix_00039520	chr17	-	2506	11	FSM	ENSG00000141510.18	ENST00000445888.6	2506	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_10	83.3076227004468	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTGTCTGAGGGGTGA	1	True	NA	-19	True	AATAAA	-13	NA	7687487	7668420	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7669691_7670608_7670716_7673534_7673609_7673700_7673838_7674180_7674291_7674858_7674972_7675052_7675237_7675993_7676273_7676381_7676404_7676520_7676620_7687376
H1_mix_00039521	chr17	-	634	5	FSM	ENSG00000141510.18	ENST00000508793.5	634	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	111.989675863447	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGCACATGACGGAGGTT	8639	False	NA	NA	False	NA	NA	NA	7677434	7675115	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7675237_7675993_7676273_7676381_7676404_7676520_7676623_7677324
H1_mix_00039522	chr17	-	1203	1	FSM	ENSG00000141510.18	ENST00000571370.1	1112	1	-72	-19	-72	19	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATCATATGTTTTCGTGT	1151	False	NA	-1	True	AATAAA	-33	NA	7686443	7685240	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7685200_7686400
H1_mix_00039523	chr17	-	432	2	FSM	ENSG00000183011.14	ENST00000576384.1	424	2	6	-14	6	0	multi-exon	FALSE	canonical	3	84	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCTGTGTCTGTGTGTA	-53	True	NA	-4	True	ATTAAA	-13	NA	7857257	7856684	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7856844_7856984
H1_mix_00039524	chr17	-	726	4	NIC	ENSG00000183011.14	novel	556	5	NA	NA	-222	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_2	214.974417082591	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTATGACCGAATGGGCC	5250	False	NA	-18	True	NA	NA	NA	7885460	7856698	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_7856844_7857014_7857199_7883234_7883336_7885164
H1_mix_00039525	chr17	-	649	2	FSM	ENSG00000170049.10	ENST00000572275.1	859	2	210	0	210	0	multi-exon	FALSE	canonical	3	17	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGTCATCAAAGGGTAA	9447	False	NA	NA	False	AAGAAA	-29	NA	7923632	7922707	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7923180_7923455
H1_mix_00039527	chr17	-	651	4	FSM	ENSG00000170043.12	ENST00000571739.5	648	4	0	-3	0	0	multi-exon	FALSE	canonical	3	31	junction_2	555.721153097486	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGCGTGTTGGTTTGA	-13	True	NA	-3	True	AATAAA	-20	NA	7931962	7930344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7930735_7931010_7931150_7931730_7931830_7931939
H1_mix_00039530	chr17	-	985	3	FSM	ENSG00000179029.15	ENST00000417073.2	480	3	-23	-482	0	0	multi-exon	FALSE	canonical	3	74	junction_1	5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTTCTGCTGGAGGATA	-25	True	NA	-114	True	NA	NA	NA	8176399	8174101	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8174617_8175756_8176027_8176199
H1_mix_00039531	chr17	-	790	7	FSM	ENSG00000178999.13	ENST00000582368.5	771	7	0	-19	0	0	multi-exon	FALSE	canonical	2	4	junction_6	334.760610984427	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTCTGTGCATGCGCCC	324	False	NA	NA	False	NA	NA	NA	8210254	8206518	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8206640_8206749_8206889_8207175_8207368_8207570_8207626_8207737_8207841_8209953_8210056_8210176
H1_mix_00039533	chr17	-	1653	7	FSM	ENSG00000178971.16	ENST00000578240.1	1653	7	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	12.7497276659369	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCAGCCTTCAGCTCTTC	NA	False	NA	NA	False	NA	NA	NA	8232648	8229357	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8229447_8229890_8230469_8230562_8230652_8231275_8231470_8231725_8231816_8231902_8232228_8232360
H1_mix_00039535	chr17	-	354	2	FSM	ENSG00000125434.11	ENST00000581320.1	354	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACAGCGCCTGGCCTCCT	6332	False	NA	NA	False	NA	NA	NA	8289035	8288168	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8288433_8288945
H1_mix_00039536	chr17	-	12370	2	FSM	ENSG00000184619.8	ENST00000396267.3	12370	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCATTATGTCGGCGACTT	-18	True	NA	NA	False	GATAAA	-1	NA	8376704	8358821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8370387_8375899
H1_mix_00039537	chr17	-	3209	3	FSM	ENSG00000184619.8	ENST00000643221.1	3209	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCGAGACCATGCCACTGC	6533	False	NA	NA	False	NA	NA	NA	8376658	8368709	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8370387_8371308_8372082_8375899
H1_mix_00039541	chr17	-	2551	7	NNC	ENSG00000141506.15	novel	680	6	NA	NA	-195	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	34.1418609139377	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATGACCAGTAGTTACT	9543	False	NA	-12	True	AATAAA	-18	NA	8885281	8878915	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_8880787_8880904_8881018_8881629_8881713_8881787_8881882_8884706_8884784_8884919_8885064_8885112
H1_mix_00039545	chr17	-	6090	40	FSM	ENSG00000125414.19	ENST00000397183.6	6078	40	0	-12	0	4	multi-exon	TRUE	canonical	2	12	junction_23	8.04948534582652	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGACTGGTCTTGTCTTTTC	-3	True	NA	2	True	AATAAA	-29	NA	10549623	10521143	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_10521433_10523089_10523186_10523307_10523413_10523495_10523667_10523758_10523885_10524465_10524670_10524756_10525066_10525223_10525349_10525450_10525617_10525692_10525877_10526598_10526796_10526937_10527057_10527747_10527875_10528689_10529080_10529161_10529253_10529335_10529482_10529563_10529741_10529831_10530075_10531632_10531889_10533284_10533422_10533508_10533633_10535072_10535191_10535277_10535366_10536529_10536607_10537232_10537543_10537664_10537836_10539204_10539355_10539443_10539563_10539927_10540067_10540593_10540698_10542874_10542974_10543097_10543162_10543710_10543804_10543901_10544017_10544099_10544128_10545345_10545503_10547474_10547619_10547716_10547941_10549374_10549418_10549558
H1_mix_00039546	chr17	-	1739	7	NNC	ENSG00000133028.12	novel	9577	6	NA	NA	0	19865	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	125.108508459213	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTGCAGACCATCTTAGTG	0	True	NA	NA	False	AAAAAG	-1	NA	10697527	10652608	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_10652640_10680336_10681254_10686726_10686843_10691871_10691965_10692763_10692962_10695740_10695832_10697234
H1_mix_00039548	chr17	-	3292	7	NIC	ENSG00000154957.14	novel	2767	9	NA	NA	-1632	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_6	27.2987586205348	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTATTTGTTTGTTCACT	2908	False	NA	-7	True	AATAAA	-20	NA	11994549	11977444	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_11978745_11983296_11983408_11984112_11984198_11990461_11990551_11990973_11991164_11992442_11992912_11993501
H1_mix_00039549	chr17	-	3019	25	NNC	ENSG00000006744.19	novel	3767	24	NA	NA	0	38892	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	175.809378305027	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATGCATGTTAATAATAC	-30	True	NA	NA	False	AAAAAG	-3	NA	13018027	12952719	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_12952752_12992391_12993046_12993686_12993832_12994424_12994504_12994763_12994885_12994962_12995063_12995702_12995813_12995939_12995979_12996546_12996686_12998411_12998509_13000155_13000275_13002273_13002360_13002440_13002580_13003478_13003575_13004988_13005102_13005752_13005826_13005920_13005980_13010612_13010672_13011662_13011783_13013206_13013276_13014438_13014497_13015767_13015833_13016861_13016933_13017070_13017122_13017702
H1_mix_00039550	chr17	-	2737	16	FSM	ENSG00000006744.19	ENST00000480891.5	2737	16	0	0	0	0	multi-exon	FALSE	canonical	3	722	junction_14	58.3897251235181	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGAGTTCTTTTGCTTCC	6695	False	NA	-9	True	AATAAA	-15	NA	13006546	12992390	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_12993046_12993686_12993832_12994424_12994504_12994763_12994885_12994962_12995063_12995702_12995813_12995939_12995979_12996546_12996686_12998411_12998509_13000155_13000275_13002273_13002360_13002440_13002580_13003478_13003575_13004988_13005102_13005752_13005826_13005920
H1_mix_00039551	chr17	-	3738	22	FSM	ENSG00000006744.19	ENST00000484122.5	3738	22	0	0	0	0	multi-exon	FALSE	canonical	3	722	junction_13	64.5322257733708	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGAGTTCTTTTGCTTCC	369	False	NA	-9	True	AATAAA	-15	NA	13017628	12992390	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_12993046_12993686_12993832_12994424_12994504_12994763_12994885_12994962_12995063_12995702_12995813_12995939_12996686_12998411_12998509_13000155_13000275_13002273_13002360_13002440_13002580_13003478_13003575_13004988_13005102_13005752_13005826_13005920_13005980_13010612_13010672_13011662_13011783_13013206_13013276_13014438_13014497_13015767_13015833_13016861_13016933_13017070
H1_mix_00039557	chr17	-	1962	3	FSM	ENSG00000236088.11	ENST00000449363.2	1964	3	2	0	-1	0	multi-exon	FALSE	canonical	1	1	junction_1	29	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGTTTCAGTTTCATTG	-15	True	NA	NA	False	NA	NA	NA	14069476	14029291	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_14030572_14033939_14034417_14069271
H1_mix_00039559	chr17	-	6143	3	FSM	ENSG00000239704.11_ENSG00000175106.17	ENST00000524205.3	632	3	-3359	-2152	-3359	9	multi-exon	FALSE	canonical	3	42	junction_2	29	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTTATGGGTGTTTCTT	NA	False	NA	-3	True	AATAAA	-30	NA	15506967	15436005	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_15438201_15440207_15440286_15503097
H1_mix_00039560	chr17	-	2943	8	NIC	ENSG00000259024.6	novel	2833	7	NA	NA	23	0	combination_of_known_splicesites	FALSE	canonical	3	42	junction_2	108.954025129119	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATCTCTTTTGTTCTT	86	False	NA	-18	True	AATAAA	-15	NA	15563536	15436020	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_15438201_15440207_15440286_15503097_15503233_15545784_15545917_15547058_15547149_15553684_15553830_15555281_15555365_15563436
H1_mix_00039562	chr17	-	380	1	FSM	ENSG00000266538.1	ENST00000584643.1	317	1	-6	-57	-6	57	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTAGCAGACCTGCCTTAA	NA	False	NA	NA	False	ATTAAA	-32	NA	15531095	15530715	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_15530700_15531100
H1_mix_00039563	chr17	-	862	2	Genic_Genomic	ENSG00000233966.1	novel	669	1	NA	NA	0	101614	multi-exon	FALSE	non_canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAAAAAAAAAAAAAAATCT	17	False	NA	NA	False	NA	NA	NA	15704900	15602617	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr17_-_15602647_15704067
H1_mix_00039564	chr17	-	1828	5	FSM	ENSG00000221926.13	ENST00000577886.5	1979	5	148	3	116	-3	multi-exon	FALSE	canonical	3	44	junction_1	5.11737237261468	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGTGCCAGATACCGTT	9065	False	NA	-10	True	AATAAA	-19	NA	15642816	15627962	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_15629199_15631618_15631715_15632508_15632675_15636035_15636270_15642720
H1_mix_00039571	chr17	-	1006	6	NIC	ENSG00000214941.8	novel	1264	8	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	69	junction_1	201.762831066577	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGACTCAGCATAACTTA	20	True	NA	-4	True	GATAAA	-32	NA	15999641	15976559	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_15977093_15978043_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999518
H1_mix_00039575	chr17	-	561	6	FSM	ENSG00000214941.8	ENST00000495825.6	558	6	0	-3	0	0	multi-exon	FALSE	canonical	3	26	junction_5	215.967034521475	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTCTTTTTTTTTTTCT	-22	True	NA	-1	True	AATAAA	-28	NA	15999683	15977726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_15977914_15978043_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999659
H1_mix_00039577	chr17	-	779	6	NIC	ENSG00000214941.8	novel	918	6	NA	NA	1	-3	intron_retention	FALSE	canonical	3	26	junction_5	258.225173056385	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACATTATTTAGTCTTTT	783	False	NA	-10	True	AATAAA	-19	NA	15999687	15977735	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_15978164_15981039_15981145_15986799_15986893_15987265_15987369_15993756_15993779_15999659
H1_mix_00039578	chr17	-	846	4	FSM	ENSG00000214941.8	ENST00000475498.5	521	4	-83	-242	-83	0	multi-exon	FALSE	canonical	3	554	junction_3	14.2361043360417	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGGCTGGGGTGCAGTG	6557	False	NA	43	True	NA	NA	NA	15993913	15977682	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_15978164_15981039_15981145_15987265_15987369_15993756
H1_mix_00039579	chr17	-	1326	1	FSM	ENSG00000275413.1	ENST00000616896.1	331	1	-94	-901	-94	901	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGATGAGTGTTAATGG	5070	False	NA	NA	False	ACTAAA	-27	NA	16023747	16022421	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_16022400_16023700
H1_mix_00039580	chr17	-	9840	47	NIC	ENSG00000141027.22	novel	10705	46	NA	NA	0	-957	combination_of_known_junctions	FALSE	canonical	3	74	junction_25	63.8817469958662	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATACAAAATATGTGTCAA	136	False	NA	-23	True	AATACA	-12	NA	16215401	16030113	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_16032484_16034764_16034945_16039432_16039655_16040440_16040495_16046950_16047094_16048844_16048989_16057513_16057738_16057906_16058065_16058470_16058600_16061400_16061895_16062104_16062271_16064067_16064188_16064869_16065020_16065484_16065695_16067893_16068122_16070164_16070526_16071408_16071666_16072144_16072229_16073428_16073570_16075533_16075703_16079963_16080065_16080407_16080510_16080606_16080728_16086281_16086443_16087171_16087346_16091862_16092059_16098366_16098497_16101249_16101806_16108785_16108913_16117887_16118028_16119422_16119486_16121051_16121270_16126081_16126210_16137310_16137413_16138157_16138213_16139007_16139187_16143605_16143697_16146375_16146549_16149450_16149518_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16215361
H1_mix_00039582	chr17	-	694	1	FSM	ENSG00000141027.22	ENST00000603989.1	247	1	193	-640	193	640	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTCCCAGTTACTTGTG	378	False	NA	NA	False	NA	NA	NA	16039273	16038579	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_16038600_16039300
H1_mix_00039587	chr17	-	1144	6	NNC	ENSG00000166582.11	novel	1132	5	NA	NA	0	26836	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	912.63092211474	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAGAAAGAAAAGAAAAG	5	True	NA	NA	False	AAAAAG	-11	NA	16353445	16315697	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_16315734_16342536_16342942_16344596_16344712_16348615_16348686_16349930_16350030_16353026
H1_mix_00039588	chr17	-	1187	6	NNC	ENSG00000166582.11	novel	1132	5	NA	NA	0	26836	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	912.63092211474	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAGAAAGAAAAGAAAAG	-19	True	NA	NA	False	AAAAAG	-11	NA	16353469	16315697	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_16315734_16342517_16342942_16344596_16344712_16348615_16348686_16349930_16350030_16353026
H1_mix_00039589	chr17	-	671	1	NIC	ENSG00000166582.11	novel	1770	5	NA	NA	1248	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAACCACTGTTAATATTT	4742	False	NA	-17	True	AATAAA	-25	NA	16348708	16348037	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_16348000_16348700
H1_mix_00039590	chr17	-	2656	3	FSM	ENSG00000181350.12	ENST00000409083.7	2656	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	20	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCAAGACCATCCTTTATT	40	False	NA	-11	True	AATACA	-18	NA	16492153	16442013	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_16444132_16462257_16462387_16491744
H1_mix_00039591	chr17	-	4051	4	ISM	ENSG00000197566.10	ENST00000311331.12	4241	6	6457	13	6445	-1	3prime_fragment	FALSE	canonical	2	12	junction_3	1.24721912892465	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAATATTTTCGTTGTGC	6444	False	NA	NA	False	ATTAAA	-3	NA	16647393	16620746	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_16624510_16633861_16633958_16634629_16634757_16647328
H1_mix_00039592	chr17	-	1262	1	FSM	ENSG00000226478.3	ENST00000413731.1	1126	1	-100	-36	-100	36	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGAGGGCATCCCAGAAACG	NA	False	NA	NA	False	NA	NA	NA	16746861	16745599	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_16745600_16746900
H1_mix_00039600	chr17	-	963	7	NNC	ENSG00000133027.18	novel	1021	7	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_6	191.793653585189	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTCCAGCCTCTGTC	479	False	NA	-10	True	AATAAA	-17	NA	17591654	17505562	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_17505849_17506226_17506302_17509433_17509546_17512508_17512655_17522279_17522396_17576919_17577024_17591530
H1_mix_00039601	chr17	-	833	6	NIC	ENSG00000133027.18	novel	1021	7	NA	NA	13	0	combination_of_known_splicesites	FALSE	canonical	2	15	junction_3	196.999086292297	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTCCAGCCTCTGTC	24	True	NA	-10	True	AATAAA	-17	NA	17591666	17505562	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_17505849_17506226_17506302_17509433_17509546_17522279_17522396_17576919_17577028_17591530
H1_mix_00039602	chr17	-	209	1	Genic_Genomic	ENSG00000133027.18	novel	NA	NA	NA	NA	-1740	196	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTTGTTTAACACTTGA	9362	False	NA	NA	False	NA	NA	NA	17508796	17508587	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr17_-_17508600_17508800
H1_mix_00039603	chr17	-	3026	14	FSM	ENSG00000072310.18	ENST00000395756.5	3026	14	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_12	68.0891340634818	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTGTGTCTTCAGCTGA	5291	False	NA	-2	True	ATTAAA	-22	NA	17818327	17812072	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_17812852_17813367_17813480_17813568_17813770_17814244_17814411_17814614_17814748_17814834_17814945_17815220_17815330_17815859_17816029_17816206_17816374_17816456_17816719_17816957_17817137_17817255_17817458_17817547_17817917_17818259
H1_mix_00039606	chr17	-	4253	20	FSM	ENSG00000072310.18	ENST00000355815.8	4253	20	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_19	78.2343946011916	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTGTGTCTTCAGCTGA	-4	True	NA	-2	True	ATTAAA	-22	NA	17836987	17812072	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_17812852_17813367_17813480_17813568_17813770_17814244_17814411_17814614_17814748_17814834_17814945_17815220_17815330_17815859_17816029_17816206_17816374_17816456_17816719_17816957_17817137_17817255_17817458_17817695_17817917_17818259_17818375_17819012_17819235_17819319_17819455_17819537_17819726_17820089_17820522_17823517_17823608_17836726
H1_mix_00039611	chr17	-	4392	2	FSM	ENSG00000175662.18	ENST00000577794.1	577	2	0	-3815	0	-8	multi-exon	FALSE	canonical	3	19	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACAAATTATGCCTGTGT	NA	False	NA	NA	False	AATAAA	-9	NA	17848949	17843518	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_17847784_17848822
H1_mix_00039612	chr17	-	5075	3	FSM	ENSG00000175662.18	ENST00000486413.1	680	3	-354	-4041	-354	0	multi-exon	FALSE	canonical	2	10	junction_2	4.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGCCTGTGTGGTCTGTT	NA	False	NA	NA	False	AATAAA	-17	NA	17851657	17843510	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_17847784_17848822_17848860_17850892
H1_mix_00039614	chr17	-	1519	4	FSM	ENSG00000171953.16	ENST00000496852.5	1662	4	143	0	143	0	multi-exon	FALSE	canonical	0	0	junction_2	108.61962171828	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGAGCCCTGTTTTCA	NA	False	NA	-7	True	ATTAAA	-20	NA	18025488	18018261	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_18018687_18021122_18021239_18021744_18021858_18024623
H1_mix_00039615	chr17	-	894	6	NNC	ENSG00000177731.16	novel	596	6	NA	NA	0	51969	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	503.713172351091	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGACGAATGTCTACAGT	1353	False	NA	NA	False	AAAAAG	-9	NA	18246062	18192845	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_18192879_18244819_18245273_18245353_18245420_18245554_18245661_18245743_18245851_18245933
H1_mix_00039628	chr17	-	996	10	NIC	ENSG00000177731.16	novel	2377	17	NA	NA	2	-22	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	327.690572203582	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAACATCGACTTCTCGCT	35	True	NA	NA	False	NA	NA	NA	18258695	18252077	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_18252147_18252471_18252557_18253300_18253459_18254078_18254183_18254520_18254683_18254768_18254855_18255182_18255264_18256525_18256598_18256908_18257020_18258627
H1_mix_00039630	chr17	-	3047	13	FSM	ENSG00000177302.15	ENST00000469739.6	3196	13	149	0	149	0	multi-exon	FALSE	canonical	0	0	junction_6	42.948531859528	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATTTAAAAATTTA	7974	False	NA	-47	True	NA	NA	NA	18307010	18273966	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_18274981_18277674_18278358_18280535_18280659_18282697_18282842_18285141_18285308_18285406_18285521_18294702_18294786_18299558_18299634_18301884_18301986_18302263_18302435_18302579_18302724_18305111_18305221_18306890
H1_mix_00039631	chr17	-	766	7	FSM	ENSG00000177302.15	ENST00000581536.5	766	7	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	50.6022068029976	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCATGGGACTTGTGGAA	NA	False	NA	NA	False	NA	NA	NA	18302361	18285427	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_18285521_18290556_18290687_18290841_18291028_18294702_18294786_18299558_18299634_18301884_18301986_18302263
H1_mix_00039632	chr17	-	5304	7	FSM	ENSG00000176974.21	ENST00000395684.5	2652	7	33	-2685	33	2672	multi-exon	FALSE	canonical	3	246	junction_4	37.7774918289832	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTTCTGTGTTGGTGTG	2953	False	NA	NA	False	NA	NA	NA	18341622	18325187	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_18328920_18329277_18329389_18330554_18330672_18333165_18333289_18335558_18335676_18340042_18340256_18340731
H1_mix_00039634	chr17	-	754	1	ISM	ENSG00000249459.11	ENST00000285274.9	5145	4	23040	6	22658	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAACTTTTGTAAATTTC	NA	False	NA	-3	True	AATAAA	-21	NA	18659188	18658434	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_18658400_18659200
H1_mix_00039635	chr17	-	1600	1	ISM	ENSG00000249459.11	ENST00000285274.9	5145	4	20979	1221	20597	-1221	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTATCTTCAGGCCCTT	NA	False	NA	NA	False	AATAGA	-43	NA	18661249	18659649	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_18659600_18661200
H1_mix_00039637	chr17	-	3252	2	ISM	ENSG00000188522.15	ENST00000388995.11	5226	6	26877	12	1	-12	3prime_fragment	FALSE	canonical	3	135	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTCCCAAAAGCAGTGTT	NA	False	NA	-12	True	AATAAA	-18	NA	18977887	18968800	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_18971749_18977583
H1_mix_00039638	chr17	-	218	1	FSM	ENSG00000262074.7	ENST00000571722.3	791	1	660	-87	660	87	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCGAAGTTCTGCGATTAC	653	False	NA	NA	False	NA	NA	NA	19063476	19063258	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19063300_19063500
H1_mix_00039639	chr17	-	525	1	FSM	ENSG00000264940.5	ENST00000580533.1	581	1	131	-75	131	75	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	125	False	NA	NA	False	GGGGCT	-33	NA	19190114	19189589	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19189600_19190100
H1_mix_00039640	chr17	-	930	7	FSM	ENSG00000108641.20	ENST00000461069.6	923	7	0	-7	0	1	multi-exon	TRUE	canonical	3	5	junction_1	87.5195216318432	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCTGTATATTTCAGCAC	-7	True	NA	1	True	AATAAA	-20	NA	19362614	19340913	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19341327_19343789_19343858_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362506
H1_mix_00039641	chr17	-	1346	6	FSM	ENSG00000108641.20	ENST00000647252.1	1346	6	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	22.969545054267	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGCTGCCAGGAGACCAG	1	True	NA	NA	False	NA	NA	NA	19362710	19343056	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19343858_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362506
H1_mix_00039642	chr17	-	733	7	FSM	ENSG00000108641.20	ENST00000395616.7	733	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	83.5452305972971	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCGTTCTCAGGGCTTTGT	10	True	NA	NA	False	NA	NA	NA	19362733	19343453	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19343551_19343789_19343858_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362506
H1_mix_00039643	chr17	-	757	6	FSM	ENSG00000108641.20	ENST00000268841.10	755	6	0	-2	0	2	multi-exon	FALSE	canonical	2	2	junction_1	97.059569337598	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATGAGTCAGACACCTTG	74	False	NA	0	True	ATTAAA	-25	NA	19362669	19346943	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19347197_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362506
H1_mix_00039645	chr17	-	926	5	FSM	ENSG00000166482.12	ENST00000571210.1	926	5	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_4	11.6913429510899	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGAGTGCTCCCTCTGC	-7	True	NA	NA	False	NA	NA	NA	19387190	19384414	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19384710_19385098_19385455_19386309_19386465_19386759_19386839_19387149
H1_mix_00039647	chr17	-	4218	16	NNC	ENSG00000108599.15	novel	4063	15	NA	NA	218	16116	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	39.1108964640575	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAGAAAGAAAGAA	NA	False	NA	NA	False	AAAAAG	-3	NA	19978125	19888185	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_19888217_19904474_19906233_19909180_19909277_19909925_19909979_19920035_19920119_19924407_19924518_19931804_19931979_19936285_19936431_19939712_19939850_19940886_19941011_19941825_19941911_19947406_19947506_19958013_19958572_19962839_19963023_19968413_19968462_19977591
H1_mix_00039648	chr17	-	272	1	FSM	ENSG00000270091.1	ENST00000602353.1	681	1	247	162	247	-28	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAGACGTTGATGTCCAA	NA	False	NA	NA	False	NA	NA	NA	19897023	19896751	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19896800_19897000
H1_mix_00039650	chr17	-	565	4	FSM	ENSG00000108599.15	ENST00000576896.5	565	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	68.2544259859144	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGTGAAATTTTGGTT	-7	True	NA	NA	False	NA	NA	NA	19977828	19958443	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19958572_19962839_19962992_19968413_19968462_19977591
H1_mix_00039651	chr17	-	1118	1	FSM	ENSG00000261033.1	ENST00000564549.1	1184	1	32	34	32	-34	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTAATAAAAACCCAGTTT	NA	False	NA	NA	False	AATAAA	-2	NA	20009202	20008084	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_20008100_20009200
H1_mix_00039652	chr17	-	605	4	FSM	ENSG00000124422.12	ENST00000578446.1	605	4	0	0	0	0	multi-exon	FALSE	canonical	3	754	junction_3	116.436916635385	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACATTCCATTGTTTTGT	6094	False	NA	NA	False	AAAAAG	-11	NA	21021196	21015650	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_21015900_21017941_21018112_21019083_21019186_21021112
H1_mix_00039653	chr17	-	605	5	FSM	ENSG00000124422.12	ENST00000476111.5	573	5	-32	0	-32	0	multi-exon	FALSE	canonical	3	23	junction_4	386.05763818373	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCGCCATTGACTTCTG	1433	False	NA	NA	False	NA	NA	NA	21042305	21017941	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_21018112_21019083_21019186_21021112_21021227_21028541_21028675_21042219
H1_mix_00039655	chr17	-	3957	26	FSM	ENSG00000007171.18	ENST00000646938.1	3995	26	38	0	38	0	multi-exon	TRUE	canonical	2	8	junction_17	3.71892457573423	254	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACATGAATTGCATTTTAC	6785	False	NA	-29	True	NA	NA	NA	27793742	27756795	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_27757354_27758880_27759076_27760029_27760179_27760622_27760745_27761143_27761232_27762797_27763006_27763980_27764145_27765534_27765717_27766509_27766589_27767704_27767838_27768976_27769152_27769534_27769585_27770912_27771018_27772307_27772453_27773160_27773244_27774256_27774452_27778689_27778792_27778881_27779057_27780766_27780907_27781035_27781178_27782014_27782107_27782943_27783107_27787677_27787827_27788808_27788932_27789603_27789689_27793587
H1_mix_00039656	chr17	-	2193	3	FSM	ENSG00000232859.10	ENST00000460380.6	2196	3	6	-3	6	3	multi-exon	FALSE	canonical	3	14	junction_2	13	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTGTCTTCTCAACTGAT	3	True	NA	-2	True	AGTAAA	-21	NA	27893353	27878354	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_27880367_27882568_27882713_27893316
H1_mix_00039658	chr17	-	217	1	FSM	ENSG00000279532.1	ENST00000623773.1	629	1	487	-75	487	75	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTAATGGCTTGCCAAAT	NA	False	NA	NA	False	NA	NA	NA	28373814	28373597	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28373600_28373800
H1_mix_00039659	chr17	-	1345	2	FSM	ENSG00000076351.13	ENST00000582590.1	1435	2	0	90	0	-90	multi-exon	FALSE	canonical	3	18	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAACCCACTGTTATCAA	22	True	NA	NA	False	AATATA	-20	NA	28406168	28404405	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28405469_28405886
H1_mix_00039660	chr17	-	2058	3	FSM	ENSG00000109103.12	ENST00000470125.5	2050	3	0	-8	0	5	multi-exon	FALSE	canonical	3	373	junction_1	5.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGCCAGCCTCTGTGTG	9159	False	NA	-3	True	AATAAA	-23	NA	28549399	28546702	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28547850_28547998_28548102_28548591
H1_mix_00039661	chr17	-	556	2	FSM	ENSG00000109103.12	ENST00000578434.1	556	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTGAGCAGGCAGCTT	-16	True	NA	NA	False	NA	NA	NA	28552625	28551824	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28552093_28552337
H1_mix_00039662	chr17	-	3814	25	NNC	ENSG00000076382.17	novel	3786	24	NA	NA	0	24378	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	141.875673028262	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGAGCACCAGCTGCAG	-6	True	NA	NA	False	NA	NA	NA	28599025	28553186	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_28553214_28577572_28577771_28578009_28578091_28578217_28578293_28578372_28578529_28578671_28578753_28579140_28579253_28579364_28579486_28579750_28579838_28580008_28580121_28583510_28583650_28583852_28583987_28584149_28584253_28584332_28584481_28584651_28584746_28585101_28585216_28585318_28585412_28585533_28585654_28585863_28585999_28586089_28586183_28586424_28586500_28591697_28591873_28591981_28593067_28598509_28598636_28598895
H1_mix_00039663	chr17	-	3775	12	NIC	ENSG00000087111.21	novel	2529	12	NA	NA	-1063	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	91.4430681393828	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTCTGAGCTCTACTCT	4883	False	NA	-5	True	AATAAA	-29	NA	28572857	28553386	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_28554496_28554850_28555062_28556165_28556267_28556826_28556973_28558475_28558591_28560048_28560192_28561421_28561630_28563430_28563523_28563817_28563908_28570851_28570964_28571048_28571189_28571549
H1_mix_00039664	chr17	-	762	3	FSM	ENSG00000087111.21	ENST00000484580.6	919	3	157	0	157	0	multi-exon	FALSE	canonical	3	291	junction_2	6	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTACAGGACTTTCAAGGG	3801	False	NA	NA	False	AAGAAA	-9	NA	28560191	28556468	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28556973_28558475_28558591_28560048
H1_mix_00039673	chr17	-	2614	4	Fusion	ENSG00000132581.10_ENSG00000167524.16	novel	1309	3	NA	NA	0	-8	multi-exon	FALSE	non_canonical	0	0	junction_1	144.058630039609	163	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATTTATTGGTTACTTGT	3	True	NA	-14	True	AATAAA	-10	NA	28661906	28601834	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr17_-_28603389_28648594_28649277_28655286_28655484_28661725
H1_mix_00039674	chr17	-	2975	1	FSM	ENSG00000167524.16	ENST00000579457.1	2975	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTTTTATCTCATTTGTT	3254	False	NA	-13	True	AATAAA	-19	NA	28610938	28607963	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28608000_28610900
H1_mix_00039675	chr17	-	7906	40	Fusion	ENSG00000007202.15_ENSG00000167524.16	novel	6852	39	NA	NA	0	-571	multi-exon	TRUE	non_canonical	0	0	junction_1	87.1279032910061	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATACAAAAATTAGCT	34	True	NA	NA	False	NA	NA	NA	28645111	28608534	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr17_-_28609061_28614446_28615247_28615663_28615799_28616095_28616198_28616378_28616510_28616617_28616754_28616888_28616996_28617227_28617319_28618790_28618972_28619653_28619776_28619859_28620016_28620508_28620631_28620987_28621171_28621398_28621499_28623759_28623967_28624232_28624391_28628264_28628560_28631478_28631682_28631819_28631920_28632048_28632240_28632941_28633163_28633282_28633402_28633548_28633752_28633894_28634087_28634516_28635610_28636964_28637171_28637835_28638095_28638251_28638416_28638523_28638643_28639314_28639461_28639574_28639643_28639900_28640026_28640559_28640684_28641888_28642079_28642274_28642336_28642868_28642988_28643163_28643312_28643609_28643660_28644057_28644188_28644988
H1_mix_00039677	chr17	-	998	4	NNC	ENSG00000132581.10	novel	735	4	NA	NA	0	17880	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	144.058630039609	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGGGGGCTGGGCTCAGG	340	False	NA	NA	False	AATACA	-25	NA	28661819	28630465	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_28630492_28648595_28649277_28655286_28655484_28661725
H1_mix_00039679	chr17	-	810	4	FSM	ENSG00000167525.15	ENST00000415329.7	810	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	23.5372045918796	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGGAGAACTGTCCAGCGA	9985	False	NA	NA	False	NA	NA	NA	28707883	28703713	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28704213_28704306_28704436_28704707_28704844_28707837
H1_mix_00039685	chr17	-	784	4	FSM	ENSG00000160606.11	ENST00000394933.7	784	4	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_3	119.04714285619	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGGGACTTAGCCCCAAG	1005	False	NA	-104	True	NA	NA	NA	28726932	28724452	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28724894_28725303_28725387_28725480_28725564_28726755
H1_mix_00039687	chr17	-	4120	3	NIC	ENSG00000173065.14	novel	4246	3	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_1	105.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	15	True	NA	-18	True	AGTAAA	-15	NA	28812421	28755979	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_28759765_28766585_28766708_28812208
H1_mix_00039688	chr17	-	4319	4	NNC	ENSG00000173065.14	novel	4246	3	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	160.949267369152	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	15	True	NA	-18	True	AGTAAA	-15	NA	28812421	28755979	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_28759877_28766585_28766708_28806501_28806589_28812208
H1_mix_00039689	chr17	-	4147	5	FSM	ENSG00000173065.14	ENST00000583307.6	4147	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	137.07912860826	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	60	False	NA	-18	True	AGTAAA	-15	NA	28842727	28755979	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28759877_28766585_28766708_28790377_28790426_28834292_28834327_28842681
H1_mix_00039691	chr17	-	4128	3	FSM	ENSG00000173065.14	ENST00000581407.6	4128	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	142	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	-3	True	NA	-18	True	AGTAAA	-15	NA	28842790	28755979	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28759877_28766585_28766708_28842681
H1_mix_00039693	chr17	-	2679	12	FSM	ENSG00000132589.16	ENST00000580805.5	2679	12	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_10	495.860884249732	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGCATTGTGTCTTCTG	19	True	NA	-7	True	AATAAA	-17	NA	28897653	28879338	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28880600_28880712_28880863_28881191_28881376_28881813_28882029_28882117_28882238_28882336_28882451_28882572_28882692_28883107_28883232_28884224_28884316_28885856_28885948_28888944_28889027_28897525
H1_mix_00039694	chr17	-	2503	10	FSM	ENSG00000132589.16	ENST00000577789.5	2503	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	528.686585958864	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCCTGCATTGTGTCTTC	20	True	NA	-9	True	AATAAA	-15	NA	28897652	28879340	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28880600_28880712_28880863_28881191_28881376_28881813_28882029_28882117_28882238_28882336_28882451_28882572_28882692_28883107_28883232_28885856_28885948_28897525
H1_mix_00039696	chr17	-	676	2	FSM	ENSG00000167536.14	ENST00000581759.1	824	2	148	0	148	0	multi-exon	FALSE	canonical	3	267	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGGCTGGCGGCAGGAGC	1074	False	NA	NA	False	NA	NA	NA	28901978	28901111	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28901302_28901492
H1_mix_00039697	chr17	-	4090	14	ISM	ENSG00000109118.14	ENST00000332830.9	4506	15	1064	0	208	0	3prime_fragment	FALSE	canonical	3	82	junction_12	19.4138972976583	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTCTGACTGTCTGTC	7	True	NA	-9	True	TATAAA	-19	NA	28950454	28905249	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_28906518_28906855_28906995_28907589_28907673_28908782_28908882_28910225_28910370_28911111_28911238_28912481_28913278_28913878_28914038_28917284_28917450_28919142_28919276_28921687_28921809_28923908_28924303_28926990_28927064_28950064
H1_mix_00039698	chr17	-	7682	11	FSM	ENSG00000109118.14	ENST00000577226.5	7679	11	0	-3	0	0	multi-exon	FALSE	canonical	3	53	junction_10	26.9154230878877	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTCTGACTGTCTGTC	31	True	NA	-9	True	TATAAA	-19	NA	28951307	28905249	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28910370_28911111_28911238_28912481_28913278_28913878_28914038_28917284_28917450_28919142_28919276_28921687_28921809_28923908_28924303_28926990_28927064_28950064_28950247_28950894
H1_mix_00039699	chr17	-	3934	15	NIC	ENSG00000109118.14	novel	4506	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_14	32.7030548407693	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTCTGACTGTCTGTC	-26	True	NA	-9	True	TATAAA	-19	NA	28951518	28905249	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_28906518_28906855_28906995_28907589_28907673_28908782_28908882_28910225_28910370_28911111_28911238_28912481_28913278_28913878_28914038_28917284_28917450_28919142_28919276_28921687_28921809_28923908_28924303_28926990_28927064_28950064_28950247_28951466
H1_mix_00039700	chr17	-	5697	10	FSM	ENSG00000109118.14	ENST00000582436.5	5697	10	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_9	27.022624266015	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGCTTCCCAAGAGGGAA	538	False	NA	NA	False	AATAAA	-32	NA	28950954	28909569	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28910370_28911111_28911238_28912481_28913278_28913878_28914038_28917284_28917450_28919142_28919276_28921687_28921809_28923908_28927064_28950064_28950247_28950894
H1_mix_00039702	chr17	-	5203	1	FSM	ENSG00000221995.5	ENST00000359450.6	5337	1	2575	-2441	2575	2441	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCCTTGCCCCATCCTC	51	False	NA	NA	False	NA	NA	NA	29076282	29071079	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_29071100_29076300
H1_mix_00039704	chr17	-	3465	12	FSM	ENSG00000108262.16	ENST00000473217.5	3462	12	0	-3	0	3	multi-exon	FALSE	canonical	3	351	junction_8	35.0793669194738	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCTGATGCTTAGAGAAT	NA	False	NA	-20	True	AATAAA	-17	NA	29579330	29573471	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_29574915_29575078_29575143_29575287_29575704_29575811_29575899_29576077_29576132_29576219_29576451_29576521_29576675_29576862_29576997_29577135_29577248_29577644_29577743_29578298_29578372_29578730
H1_mix_00039705	chr17	-	576	6	FSM	ENSG00000108262.16	ENST00000586574.5	576	6	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_1	30.4197304393053	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCACTCGGAGCAACCGGG	8196	False	NA	NA	False	NA	NA	NA	29581472	29576887	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_29576997_29577135_29577248_29577644_29577743_29578298_29578372_29578730_29578780_29581337
H1_mix_00039707	chr17	-	421	1	FSM	ENSG00000264007.1	ENST00000582367.1	638	1	309	-92	309	92	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCATCAGCCACCCCTCC	4332	False	NA	NA	False	NA	NA	NA	29621945	29621524	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_29621500_29621900
H1_mix_00039708	chr17	-	9484	16	FSM	ENSG00000141298.19	ENST00000540801.6	9484	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	5.38475213501565	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTACTTCATCAGATGCA	-21	True	NA	0	True	AATAAA	-21	NA	29930228	29625937	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_29632932_29635967_29636803_29648143_29648345_29650653_29650801_29655560_29655608_29666866_29666996_29667129_29667224_29671934_29672130_29676819_29676886_29677672_29677742_29684562_29684685_29695458_29695524_29702958_29703063_29793893_29793938_29848848_29848930_29929937
H1_mix_00039711	chr17	-	2386	13	NNC	ENSG00000108578.15	novel	2307	12	NA	NA	0	58348	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	119.414166058954	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCGTTGCTTCGCATCCTC	-27	True	NA	NA	False	NA	NA	NA	30291994	30189854	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_30189887_30248205_30249169_30266884_30266955_30271270_30271389_30272560_30272629_30272740_30272900_30274041_30274198_30285387_30285481_30286813_30286903_30287805_30287948_30289372_30289483_30291310_30291509_30291806
H1_mix_00039712	chr17	-	3055	1	FSM	ENSG00000108578.15	ENST00000578795.1	2079	1	-977	1	-977	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAAGCTGATTTATGTGA	NA	False	NA	-19	True	AATAAA	-16	NA	30251260	30248205	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_30248200_30251300
H1_mix_00039713	chr17	-	745	2	FSM	ENSG00000108578.15	ENST00000577306.1	761	2	16	0	16	0	multi-exon	FALSE	canonical	3	422	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTGCATTTGGGAGTGT	NA	False	NA	NA	False	TTTAAA	-28	NA	30273114	30272257	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_30272629_30272740
H1_mix_00039714	chr17	-	492	3	FSM	ENSG00000264107.1	ENST00000583377.1	492	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	6	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTTAAAAAATAAATAAATG	NA	False	NA	NA	False	NA	NA	NA	31095450	31090786	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_31090936_31093372_31093492_31095226
H1_mix_00039716	chr17	-	422	3	FSM	ENSG00000172301.11	ENST00000579984.1	422	3	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_2	314	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACCATCCGCCTCCACTG	18	True	NA	NA	False	NA	NA	NA	31859213	31852218	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_31852309_31852811_31853031_31859100
H1_mix_00039718	chr17	-	694	5	FSM	ENSG00000108651.10	ENST00000484661.1	694	5	0	0	0	0	multi-exon	FALSE	canonical	3	474	junction_2	20.7243817760627	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTCAGCTTTGTGAAAT	NA	False	NA	NA	False	NA	NA	NA	31873948	31863348	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_31863517_31865365_31865439_31868045_31868113_31873377_31873488_31873672
H1_mix_00039719	chr17	-	1706	1	FSM	ENSG00000280020.1	ENST00000623905.1	1129	1	-553	-24	-553	24	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTGGCGGCCGGGCAGAG	NA	False	NA	NA	False	NA	NA	NA	32180627	32178921	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_32178900_32180600
H1_mix_00039726	chr17	-	1063	1	Genic_Genomic	ENSG00000279668.3	novel	NA	NA	NA	NA	5906	100	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGAGGCAGGTGGATCACT	NA	False	NA	NA	False	NA	NA	NA	33828661	33827598	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr17_-_33827600_33828700
H1_mix_00039727	chr17	-	3173	1	FSM	ENSG00000226049.3	ENST00000530992.1	3192	1	19	0	19	0	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAATTCAAAGTATCAATAT	7651	False	NA	NA	False	AATAAA	-42	NA	34039853	34036680	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_34036700_34039900
H1_mix_00039728	chr17	-	4393	9	FSM	ENSG00000252328.1_ENSG00000185379.21	ENST00000586044.5	1571	9	1	-2823	0	0	multi-exon	FALSE	canonical	3	28	junction_7	16.0058583025091	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAATATACATATACA	4	True	NA	94	True	NA	NA	NA	35119745	35097559	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_35101037_35101200_35101366_35103253_35103325_35103453_35103545_35106385_35106482_35106987_35107123_35107365_35107448_35119110_35119173_35119531
H1_mix_00039733	chr17	-	1487	1	FSM	ENSG00000267648.1	ENST00000590539.1	871	1	-39	-577	-39	577	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGAGGTACATGTAATT	NA	False	NA	NA	False	NA	NA	NA	35407857	35406370	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_35406400_35407900
H1_mix_00039734	chr17	-	2811	4	FSM	ENSG00000172123.13	ENST00000304905.10	2506	4	-32	-273	-32	273	multi-exon	FALSE	canonical	1	8	junction_3	5.09901951359278	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCACCAGGGTCTGGCAT	723	False	NA	NA	False	NA	NA	NA	35432532	35410648	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_35411928_35420273_35420382_35421989_35423069_35432187
H1_mix_00039735	chr17	-	4525	7	NNC	ENSG00000154760.14	novel	6004	7	NA	NA	0	9257	intron_retention	FALSE	non_canonical	0	0	junction_1	37.557363533075	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	20	True	NA	NA	False	NA	NA	NA	35448755	35425838	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_35425864_35438982_35441367_35441562_35442287_35443788_35443921_35444614_35445694_35447267_35447415_35448721
H1_mix_00039744	chr17	-	373	4	ISM	ENSG00000274933.5	ENST00000616671.4	1982	11	3088	3565	3088	-3067	internal_fragment	FALSE	canonical	2	5	junction_3	17.1464281994822	189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTTATGGTCCCCTCA	NA	False	NA	NA	False	NA	NA	NA	36259897	36257020	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_36257116_36257828_36257950_36258492_36258542_36259789
H1_mix_00039745	chr17	-	4112	13	FSM	ENSG00000278259.5	ENST00000611622.4	4226	13	114	0	114	0	multi-exon	FALSE	canonical	1	3	junction_6	61.082537511869	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTAGAATCACGTTTTGAT	8679	False	NA	-13	True	ATTAAA	-20	NA	36509808	36495754	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_36496407_36498265_36498560_36499074_36499161_36500829_36500960_36501068_36501236_36501851_36501902_36503096_36503201_36503949_36504021_36505296_36505405_36506455_36506609_36506962_36507140_36507398_36507513_36507802
H1_mix_00039746	chr17	-	1487	7	ISM	ENSG00000278259.5	ENST00000610930.4	3271	22	30522	402	24	28	3prime_fragment	FALSE	canonical	3	141	junction_3	23.5702260395516	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTCCAAATGCACATGAACA	3396	False	NA	NA	False	NA	NA	NA	36504405	36496156	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_36496407_36498265_36498560_36499074_36499161_36500829_36500960_36501068_36501236_36503096_36503201_36503949
H1_mix_00039749	chr17	-	1674	12	NNC	ENSG00000278259.5	novel	1640	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_9	67.0374263298168	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCTGCTCACTTAGTTT	2	True	NA	-26	True	ATTAAA	-21	NA	36534810	36513085	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_36513506_36513628_36513726_36514445_36514549_36515112_36515183_36515857_36515991_36525227_36525342_36527550_36527700_36528063_36528203_36530975_36531068_36532526_36532682_36533952_36534105_36534760
H1_mix_00039750	chr17	-	301	2	ISM	ENSG00000277268.2	ENST00000616341.1	490	3	73634	-1	70216	1	3prime_fragment	FALSE	canonical	2	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCGTGTGGCTGTTGTTT	NA	False	NA	0	True	AATAAA	-22	NA	36863027	36861672	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_36861963_36863016
H1_mix_00039752	chr17	-	6074	27	ISM	ENSG00000278540.5	ENST00000612895.4	9624	54	88990	4	-4965	0	3prime_fragment	FALSE	canonical	0	0	junction_15	68.0811059123493	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGAGTTACAGTTTGTCA	NA	False	NA	-27	True	AATAAA	-14	NA	37210777	37084997	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_37087440_37088937_37089075_37096995_37097167_37097829_37097985_37111530_37111644_37113087_37113266_37121354_37121491_37122530_37122628_37125697_37125795_37129364_37129486_37130074_37130219_37149863_37149975_37151300_37151422_37155682_37155781_37161780_37162051_37179259_37179407_37181200_37181357_37188276_37188481_37191119_37191276_37192089_37192306_37193373_37193416_37200138_37200184_37200426_37200484_37205764_37205873_37206782_37206880_37207656_37207801_37210466
H1_mix_00039755	chr17	-	370	1	FSM	ENSG00000274308.1	ENST00000610837.1	814	1	751	-307	751	307	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTAAAATTTTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	37140673	37140303	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_37140300_37140700
H1_mix_00039760	chr17	-	8417	23	NIC	ENSG00000275066.5	novel	8141	22	NA	NA	0	10	intron_retention	TRUE	canonical	3	28	junction_17	24.1372196389896	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAAGCCTTTTCTTGGTCTT	18	True	NA	-9	True	AATACA	-23	NA	37609381	37514796	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_37519072_37520178_37520215_37520537_37520649_37535978_37536128_37538323_37538421_37539191_37539246_37540379_37540544_37541971_37542566_37553114_37554060_37561194_37561258_37561470_37561590_37568790_37568925_37570636_37570886_37571790_37571988_37576340_37576419_37577379_37577614_37579131_37579435_37584647_37584760_37585324_37585431_37586418_37586550_37596222_37596345_37600362_37600404_37609278
H1_mix_00039762	chr17	-	2730	9	FSM	ENSG00000275410.6	ENST00000621123.4	1971	9	-27	-732	-27	-9	multi-exon	FALSE	canonical	3	13	junction_7	9.25928587959136	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCACTACCCAGAGTCTC	3	True	NA	-14	True	ATTAAA	-11	NA	37745086	37686439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_37687393_37699075_37699195_37700982_37701178_37704916_37705050_37710502_37710664_37731594_37731831_37733556_37733744_37739439_37739640_37744540
H1_mix_00039763	chr17	-	3780	25	Fusion	ENSG00000274611.4_ENSG00000274487.3	novel	2077	14	NA	NA	7	0	multi-exon	TRUE	canonical	0	0	junction_1	133.419913295913	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAGATTTTAGACAGAAA	-12	True	NA	NA	False	AATAAA	-19	NA	38257357	38181658	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr17_-_38182543_38183523_38183677_38184046_38184147_38184609_38184676_38185059_38185155_38185867_38185989_38186531_38186581_38187833_38187944_38188272_38188381_38188823_38188905_38189386_38189610_38190709_38190796_38190957_38191031_38195879_38195941_38196366_38196472_38197545_38197711_38201104_38201220_38202071_38202106_38202237_38202335_38202780_38202982_38205634_38205743_38208994_38209117_38219045_38219124_38242200_38242286_38256897
H1_mix_00039764	chr17	-	6275	8	NIC	ENSG00000274487.3	novel	1815	12	NA	NA	6	-4	intron_retention	FALSE	canonical	1	2	junction_5	146.759278119939	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCTGTGTTCAGGTTGA	157	False	NA	NA	False	AATAAA	-16	NA	38257188	38195748	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_38195941_38196366_38196472_38197545_38197711_38201104_38202982_38205634_38209117_38219045_38219124_38242200_38242286_38256897
H1_mix_00039765	chr17	-	703	4	FSM	ENSG00000276170.5	ENST00000617990.5	734	4	32	-1	32	1	multi-exon	FALSE	canonical	3	19	junction_3	10.077477638554	979	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGGCTCAAAGAGAACAAG	0	True	NA	NA	False	AATAAA	-34	NA	38452399	38450392	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_38450724_38451305_38451394_38451625_38451828_38452317
H1_mix_00039767	chr17	-	453	2	FSM	ENSG00000277363.5	ENST00000621275.1	453	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACTTCTGGGCCGAGGAG	5229	False	NA	NA	False	GGGGCT	-36	NA	38546721	38545267	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_38545460_38546460
H1_mix_00039768	chr17	-	3026	12	FSM	ENSG00000277258.5	ENST00000616199.4	3062	12	36	0	36	0	multi-exon	FALSE	canonical	1	1	junction_10	40.5839605169292	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCCTGTAGTTCTTTGG	1	True	NA	-4	True	AATAAA	-15	NA	38749781	38733897	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_38735601_38736089_38736171_38738352_38738449_38738540_38738596_38738752_38738862_38739067_38739119_38739197_38739254_38739585_38739683_38740290_38740443_38747878_38747972_38748195_38748309_38749361
H1_mix_00039771	chr17	-	650	6	FSM	ENSG00000273559.5	ENST00000619462.4	650	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	40.6428345468177	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGCGAAAACGGCAAGAGAT	NA	False	NA	NA	False	NA	NA	NA	38810595	38802839	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_38802862_38806296_38806396_38806764_38806977_38809701_38809766_38810275_38810401_38810467
H1_mix_00039776	chr17	-	6220	14	FSM	ENSG00000161381.14	ENST00000315392.9	6230	14	0	10	0	-10	multi-exon	TRUE	canonical	2	3	junction_2	4.49193886789429	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAAAGTCTATGCTGTCA	-14	True	NA	NA	False	AATAAA	-3	NA	39151637	39063322	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_39067960_39069855_39070017_39072449_39072486_39077912_39078049_39079103_39079165_39083458_39083541_39087606_39087703_39105853_39105954_39107406_39107526_39108122_39108246_39108903_39108974_39109247_39109392_39139653_39139833_39151361
H1_mix_00039777	chr17	-	3480	14	NIC	ENSG00000067191.16	novel	3711	14	NA	NA	12	-6	combination_of_known_junctions	FALSE	canonical	1	3	junction_8	24.8891031502001	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTGGCTGCCTCCCAA	8	True	NA	-18	True	TATAAA	-14	NA	39197657	39173806	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_39175658_39177349_39177536_39177983_39178080_39183712_39183865_39184030_39184141_39184324_39184384_39184783_39184865_39185949_39186105_39186495_39186573_39186792_39186930_39187478_39187602_39191473_39191594_39194883_39194971_39197411
H1_mix_00039779	chr17	-	1620	15	FSM	ENSG00000108306.13	ENST00000577399.5	1620	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_14	8.47445139997937	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGAGGTGGTCAACCTT	37	False	NA	NA	False	NA	NA	NA	39402523	39261459	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_39261568_39264174_39264388_39265396_39265454_39268826_39268872_39270795_39270857_39274969_39275101_39281388_39281464_39282728_39282856_39285477_39285574_39297126_39297196_39298989_39299085_39301000_39301076_39303584_39303640_39343179_39343242_39402172
H1_mix_00039780	chr17	-	925	2	FSM	ENSG00000141741.12	ENST00000498164.2	925	2	0	0	0	0	multi-exon	FALSE	canonical	3	641	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATGCTAACTAGTGTGTG	16	False	NA	-10	True	AGTAAA	-16	NA	39730516	39729159	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_39729762_39730193
H1_mix_00039781	chr17	-	1299	10	FSM	ENSG00000073605.19	ENST00000360317.7	1468	10	169	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	10.4029910228848	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCTTTTGAAGCCTCA	9830	False	NA	0	True	ATTAAA	-23	NA	39917147	39904594	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_39904965_39905425_39905497_39905846_39905986_39906110_39906272_39906960_39906988_39908175_39908215_39908957_39909043_39909755_39909925_39912325_39912498_39917081
H1_mix_00039783	chr17	-	3463	26	NNC	ENSG00000008838.21	novel	3480	26	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_3	57.9788375185291	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGACTGTGTGTGCTGT	12	True	NA	-13	True	AATAAA	-17	NA	40054394	40019103	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_40019646_40019784_40019934_40020272_40020351_40021954_40022055_40022393_40022485_40022644_40022827_40023130_40023396_40026155_40026332_40026646_40026747_40026855_40027035_40027382_40027466_40027908_40027947_40028825_40028969_40029747_40029860_40031158_40031246_40031537_40031621_40032042_40032091_40032648_40032763_40033055_40033207_40033344_40033457_40035116_40035350_40035721_40035796_40036115_40036155_40053297_40053381_40053468_40053636_40054360
H1_mix_00039791	chr17	-	2906	8	FSM	ENSG00000073584.20	ENST00000643030.1	2906	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	441.024364174949	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATGTAATAAAAAAAAAAAT	2	True	NA	-30	True	NA	NA	NA	40647832	40627737	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_40628994_40630713_40631694_40632194_40632368_40635930_40636103_40636394_40636527_40637491_40637573_40645795_40645848_40647772
H1_mix_00039793	chr17	-	2575	9	FSM	ENSG00000073584.20	ENST00000645152.1	2575	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	414.274290175	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAAATCCATCCTTATTG	6	True	NA	NA	False	NA	NA	NA	40647828	40628108	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_40628994_40630713_40631694_40632194_40632368_40635930_40636103_40636394_40636527_40637491_40637573_40645575_40645620_40645795_40645848_40647772
H1_mix_00039794	chr17	-	3667	11	FSM	ENSG00000073584.20	ENST00000447024.6	1973	11	18	-1712	0	0	multi-exon	FALSE	canonical	3	34	junction_1	360.038122981442	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGTCCAAATGTAATAAAAAA	10	True	NA	-36	True	AATAGA	-45	NA	40647824	40627743	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_40630287_40630713_40630925_40631591_40631694_40632194_40632368_40635930_40636103_40636394_40636527_40637491_40637573_40642454_40642560_40645575_40645620_40645795_40645848_40647772
H1_mix_00039800	chr17	-	666	4	NNC	ENSG00000186395.9	novel	2143	8	NA	NA	3474	84485	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	658.552115545071	2068	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCACACAGTGGCTCATG	3473	False	NA	NA	False	NA	NA	NA	40819140	40733631	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_40733659_40818119_40818483_40818786_40818988_40819065
H1_mix_00039801	chr17	-	1416	7	NNC	ENSG00000171345.13	novel	1390	6	NA	NA	0	40696	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1744.84142068365	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTGGGTGTGGTGGCGG	-2	True	NA	NA	False	AATACA	-23	NA	41528308	41482920	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_41482946_41523615_41523998_41524142_41524269_41524378_41524541_41524842_41525000_41525190_41525274_41527827
H1_mix_00039802	chr17	-	868	3	FSM	ENSG00000171345.13	ENST00000468880.1	868	3	0	0	0	0	multi-exon	FALSE	canonical	3	4585	junction_1	9.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGAGGGTGTCTTCTGGG	5325	False	NA	-111	True	GGGGCT	-11	NA	41524993	41523713	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41524269_41524378_41524541_41524842
H1_mix_00039804	chr17	-	4082	15	NIC	ENSG00000173801.17	novel	3505	14	NA	NA	0	464	intron_retention	FALSE	canonical	3	25	junction_14	188.014979863471	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTCCTGTTCTTTGTC	-7	True	NA	NA	False	NA	NA	NA	41786710	41754139	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_41755896_41756174_41756215_41757414_41757537_41757633_41757785_41758398_41758519_41758714_41758871_41762982_41763322_41764712_41764817_41764922_41765068_41767378_41767581_41768968_41769208_41769417_41769678_41771646_41771863_41772817_41772927_41786587
H1_mix_00039805	chr17	-	3298	15	FSM	ENSG00000173801.17	ENST00000393930.5	3298	15	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_14	153.215734258887	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGTTTAGGGGAGTGG	1548	False	NA	-1	True	AATAAA	-19	NA	41785155	41754603	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41755433_41755729_41755896_41756174_41756215_41757414_41757537_41757633_41757785_41758398_41758519_41758714_41758871_41762982_41763322_41764712_41764817_41764922_41765068_41767378_41767581_41768968_41769208_41769417_41769678_41771646_41771863_41784946
H1_mix_00039810	chr17	-	1729	8	FSM	ENSG00000141698.17	ENST00000470690.5	1729	8	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_7	201.718130274977	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAATGTGTGAAACAG	-5	True	NA	-47	True	TTTAAA	-17	NA	41836228	41825226	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41825658_41827425_41827627_41828789_41828953_41830800_41830891_41832391_41832478_41835069_41835117_41835202_41835273_41835587
H1_mix_00039818	chr17	-	1784	14	NIC	ENSG00000168259.17	novel	1806	14	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_6	218.359456106224	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTTGCTCTGGCATCTG	16	True	NA	-20	True	AATAAA	-19	NA	42017422	41976434	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987818_41987906_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42017339
H1_mix_00039819	chr17	-	2538	13	FSM	ENSG00000168259.17	ENST00000674481.1	2533	13	0	-5	0	0	multi-exon	FALSE	canonical	3	567	junction_12	95.3605730314625	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGAGGCAGCTTGTGAATT	0	True	NA	-28	True	NA	NA	NA	42017438	41976522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987818_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42017339
H1_mix_00039822	chr17	-	1314	6	NIC	ENSG00000108771.13	novel	2591	14	NA	NA	70	3	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	10.8921990433521	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGTGGTGTCTTAAT	4926	False	NA	-4	True	AATAAA	-17	NA	42107778	42101407	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_42101947_42102215_42102313_42103607_42103799_42104765_42104928_42105017_42105168_42107603
H1_mix_00039823	chr17	-	3079	18	NNC	ENSG00000108773.11	novel	3115	18	NA	NA	18	-14	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	47.911394574817	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTTTTTATTTCTCTGT	5	True	NA	-23	True	NA	NA	NA	42121349	42113131	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_42113843_42113999_42114085_42114218_42114283_42114357_42114395_42114489_42114605_42114888_42115036_42115722_42115834_42117034_42117162_42117387_42117597_42117677_42117815_42117906_42118018_42118296_42118404_42119244_42119437_42119536_42119719_42120029_42120120_42120224_42120371_42120705_42120830_42120965
H1_mix_00039825	chr17	-	608	3	FSM	ENSG00000108774.15	ENST00000546881.1	608	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	385.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGGGTGGGGGGTGGGC	-4	True	NA	NA	False	NA	NA	NA	42154992	42128550	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42128801_42130336_42130591_42154888
H1_mix_00039833	chr17	-	243	1	FSM	ENSG00000168610.16	ENST00000590776.1	1483	1	1064	176	1016	-176	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTCTGTGTATGGGTTG	1220	False	NA	NA	False	ACTAAA	-7	NA	42387357	42387114	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42387100_42387400
H1_mix_00039834	chr17	-	664	7	FSM	ENSG00000131470.15	ENST00000590760.5	664	7	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_4	121.371903210294	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGTCAGGACTGGTGGGG	13	True	NA	NA	False	NA	NA	NA	42577696	42572961	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42573025_42573106_42573167_42573310_42573365_42573477_42573624_42574195_42574211_42577212_42577303_42577460
H1_mix_00039836	chr17	-	2645	13	FSM	ENSG00000068137.15	ENST00000591196.5	2640	13	0	-5	0	5	multi-exon	FALSE	canonical	3	19	junction_2	27.8581476212775	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGGGAGTGTTATTCAG	-4	True	NA	NA	False	AAAAAG	-23	NA	42676633	42667908	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42668304_42669429_42669622_42669942_42670377_42670572_42670706_42670993_42671131_42671350_42671559_42672085_42672393_42673175_42673297_42673398_42673557_42673642_42673835_42673933_42674014_42674353_42674410_42676401
H1_mix_00039837	chr17	-	3808	14	ISM	ENSG00000108799.13	ENST00000428826.7	4633	21	25862	0	0	0	3prime_fragment	FALSE	canonical	3	27	junction_7	6.24641909251132	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGCAAGTTGTGTACTG	NA	False	NA	-7	True	AATAAA	-14	NA	42719178	42700274	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_42702593_42702876_42702962_42703739_42703821_42704601_42704684_42705087_42705184_42706006_42706186_42707957_42708084_42708875_42708917_42709845_42709938_42712288_42712486_42713208_42713390_42717975_42718068_42718453_42718618_42719104
H1_mix_00039846	chr17	-	819	3	NNC	ENSG00000183978.8	novel	780	2	NA	NA	-20	64659	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	750.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATACATACTTCTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	42798724	42730487	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_42730516_42797633_42798168_42798467
H1_mix_00039847	chr17	-	1610	8	NIC	ENSG00000126581.13	novel	2112	12	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_5	232.888078576077	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGGGTGCACTGTTGGG	5713	False	NA	-12	True	AATAAA	-25	NA	42818560	42810133	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_42810929_42811654_42811798_42813947_42814009_42814523_42814674_42815670_42815773_42815907_42816055_42818220_42818416_42818543
H1_mix_00039848	chr17	-	1369	6	NIC	ENSG00000126581.13	novel	2112	12	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_4	225.454563049853	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGGGTGCACTGTTGGG	5705	False	NA	-12	True	AATAAA	-25	NA	42818568	42810133	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_42810929_42811654_42811798_42813947_42814009_42814523_42814674_42818220_42818416_42818543
H1_mix_00039849	chr17	-	1886	10	NIC	ENSG00000126581.13	novel	2112	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	217.668680156305	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGGGTGCACTGTTGGG	10	True	NA	-12	True	AATAAA	-25	NA	42824263	42810133	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_42810929_42814523_42814674_42815907_42816055_42818220_42818416_42818543_42818681_42818786_42818878_42819547_42819610_42820773_42820842_42823747_42823880_42824154
H1_mix_00039851	chr17	-	2504	11	FSM	ENSG00000126581.13	ENST00000543382.6	2504	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	174.500429798898	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGCACTTAACAATATGAA	-14	True	NA	39	True	NA	NA	NA	42824287	42810413	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42810929_42811654_42811798_42813947_42814009_42814523_42814674_42815907_42816055_42818220_42818416_42818543_42818681_42818786_42819610_42820773_42820842_42823747_42823880_42824154
H1_mix_00039854	chr17	-	1004	3	FSM	ENSG00000126581.13	ENST00000589493.1	719	3	0	-285	0	285	multi-exon	FALSE	canonical	3	502	junction_1	66	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTACGTTTAAACTGAGA	5591	False	NA	NA	False	NA	NA	NA	42818682	42815384	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42816055_42818220_42818416_42818543
H1_mix_00039855	chr17	-	1349	13	NNC	ENSG00000266967.7	novel	1320	12	NA	NA	0	7143	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	89.5482489437336	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGCCTTAATCCCTGGC	4	True	NA	NA	False	NA	NA	NA	42964454	42943382	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_42943412_42950525_42950729_42951799_42951895_42953723_42953779_42954875_42954968_42955157_42955225_42955841_42955973_42956203_42956321_42956403_42956561_42957137_42957196_42961191_42961352_42964105_42964238_42964401
H1_mix_00039867	chr17	-	7570	23	NIC	ENSG00000012048.23	novel	7088	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_17	24.5495366975859	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGAATGACTGTTCTTGA	162	False	NA	-5	True	AATAAA	-21	NA	43125315	43044294	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_43045803_43047642_43047704_43049120_43049195_43051062_43051118_43057051_43057136_43063332_43063374_43063873_43063952_43067607_43067696_43070927_43071239_43074330_43074522_43076487_43076615_43082403_43082576_43090943_43091033_43091434_43094861_43095845_43095923_43097243_43097290_43099774_43099878_43104121_43104262_43104867_43104957_43106455_43106534_43115725_43115780_43124016_43124116_43124736
H1_mix_00039874	chr17	-	2406	2	FSM	ENSG00000267002.4	ENST00000634503.1	2406	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGGTTATCATCTTCGA	808	False	NA	NA	False	AAAAAG	-15	NA	43170441	43165759	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_43167850_43170125
H1_mix_00039876	chr17	-	263	1	FSM	ENSG00000275219.1	ENST00000620268.1	191	1	24	-96	24	96	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTAACTGCTTCCCTGA	NA	False	NA	NA	False	NA	NA	NA	43296591	43296328	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_43296300_43296600
H1_mix_00039877	chr17	-	940	5	FSM	ENSG00000188825.15	ENST00000658754.1	1083	5	0	143	0	-122	multi-exon	FALSE	canonical	2	2	junction_1	2.87228132326901	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCATATTCTCTGGGTTG	859	False	NA	NA	False	NA	NA	NA	43388350	43371219	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_43371427_43377670_43377814_43379122_43379263_43381272_43381661_43388288
H1_mix_00039879	chr17	-	2349	14	NNC	ENSG00000175832.13	novel	2335	13	NA	NA	0	68112	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	235.198594167195	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTAGTGGAGCTGAAGC	30	False	NA	NA	False	NA	NA	NA	43546323	43459731	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_43459757_43527842_43528744_43529134_43529237_43529503_43529677_43529883_43529953_43530106_43530182_43532673_43532940_43533186_43533349_43533858_43533986_43536425_43536480_43544974_43545023_43545273_43545371_43545557_43545669_43546184
H1_mix_00039880	chr17	-	2363	14	NNC	ENSG00000175832.13	novel	2335	13	NA	NA	0	68112	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	191.800839753577	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTAGTGGAGCTGAAGC	-5	True	NA	NA	False	NA	NA	NA	43546340	43459731	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_43459757_43527842_43528744_43529134_43529237_43529503_43529677_43529883_43529953_43530106_43530182_43532673_43532940_43533186_43533349_43533858_43533986_43536425_43536480_43544974_43545023_43545273_43545368_43545557_43545669_43546184
H1_mix_00039882	chr17	-	1630	11	FSM	ENSG00000175832.13	ENST00000545089.5	1628	11	0	-2	0	0	multi-exon	FALSE	canonical	3	38	junction_6	184.913493288078	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAATTCAGCTCAGCTTCT	7	True	NA	NA	False	NA	NA	NA	43545713	43528277	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_43528744_43529134_43529237_43529503_43529677_43529883_43529953_43530106_43530182_43532673_43532940_43533858_43533986_43536425_43536480_43544974_43545023_43545273_43545368_43545557
H1_mix_00039884	chr17	-	2119	1	FSM	ENSG00000267253.1	ENST00000587110.1	2123	1	-51	55	-51	-55	mono-exon	FALSE	NA	NA	NA	NA	NA	223	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCAGGTTGAAATAGTTC	1235	False	NA	NA	False	GATAAA	-4	NA	43720487	43718368	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_43718400_43720500
H1_mix_00039885	chr17	-	4182	4	NNC	ENSG00000108861.9	novel	2077	4	NA	NA	-49	45078	intron_retention	FALSE	non_canonical	0	0	junction_1	58.0746645850552	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACAAGCCCTCTCGCCTA	NA	False	NA	NA	False	NA	NA	NA	43779026	43721046	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_43721081_43766120_43769815_43774711_43774939_43778799
H1_mix_00039887	chr17	-	1372	13	FSM	ENSG00000161647.19	ENST00000589375.5	1388	13	0	16	0	-16	multi-exon	FALSE	canonical	2	4	junction_2	6.02079728939615	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGCTCATGGACTCCAG	16	True	NA	NA	False	NA	NA	NA	43833144	43817934	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_43818111_43820861_43821059_43823930_43824006_43825755_43825842_43827750_43827833_43829653_43829792_43830026_43830108_43831243_43831322_43831558_43831678_43831881_43831944_43832076_43832252_43832760_43832820_43833100
H1_mix_00039891	chr17	-	3728	27	NNC	ENSG00000108840.16	novel	5319	27	NA	NA	23	-1	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_23	103.030967080363	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGGTGTGCCGTGTGGGT	10	True	NA	34	True	ATTAAA	-21	NA	44123595	44078294	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_44078416_44078499_44078666_44078794_44078880_44079143_44079278_44080106_44080226_44080400_44080499_44080762_44080883_44082584_44082673_44082764_44082821_44083544_44083653_44083804_44083855_44084554_44084676_44085021_44085156_44086571_44086738_44087411_44087697_44088386_44088599_44091269_44091493_44091699_44091832_44092171_44092285_44092380_44092528_44092675_44092807_44093091_44093207_44093313_44093483_44093574_44093835_44110728_44110801_44117493_44117705_44123503
H1_mix_00039892	chr17	-	3746	27	NNC	ENSG00000108840.16	novel	5326	27	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_23	104.523347523483	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGGTGTGCCGTGTGGG	-6	True	NA	33	True	ATTAAA	-20	NA	44123611	44078295	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_44078416_44078499_44078666_44078794_44078880_44079143_44079278_44080106_44080226_44080400_44080499_44080762_44080883_44082584_44082673_44082764_44082821_44083544_44083653_44083804_44083855_44084554_44084676_44085021_44085156_44086571_44086738_44087411_44087697_44088386_44088599_44091269_44091493_44091699_44091832_44092171_44092285_44092380_44092528_44092675_44092807_44093091_44093207_44093313_44093483_44093574_44093835_44110728_44110804_44117493_44117705_44123503
H1_mix_00039896	chr17	-	2024	4	FSM	ENSG00000267080.7	ENST00000669052.1	2024	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	13.1993265821489	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTGGCTAATTTTTTAA	0	True	NA	NA	False	NA	NA	NA	44186709	44176220	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44177817_44181622_44181742_44182929_44183094_44186564
H1_mix_00039905	chr17	-	1569	13	NNC	ENSG00000013306.16	novel	1607	12	NA	NA	0	49350	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	654.958326706533	1613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTAAATGTGACATTGGGC	4	True	NA	NA	False	NA	NA	NA	44324806	44270274	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_44270304_44319627_44320117_44320195_44320277_44320354_44320437_44320621_44320732_44321057_44321232_44321433_44321559_44321699_44321768_44322418_44322529_44322807_44322853_44323283_44323344_44323477_44323578_44324710
H1_mix_00039906	chr17	-	3114	9	NNC	ENSG00000161682.15	novel	3138	8	NA	NA	0	82940	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	81.8077013489561	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTAAATGTGACATTGGGC	53	False	NA	NA	False	NA	NA	NA	44363800	44270274	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_44270304_44353214_44355192_44355714_44355842_44355957_44356075_44356172_44356353_44356429_44356589_44359578_44359672_44359904_44360133_44363596
H1_mix_00039912	chr17	-	3059	3	FSM	ENSG00000182963.11	ENST00000591424.5	586	3	0	-2473	0	0	multi-exon	FALSE	canonical	3	41	junction_2	79.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAAACTTAAGGA	-5	True	NA	NA	False	NA	NA	NA	44830816	44803033	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44805838_44807393_44807470_44830637
H1_mix_00039915	chr17	-	3045	27	FSM	ENSG00000108883.13	ENST00000402521.7	3045	27	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_26	211.356257195337	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCAGTGAGAGAGGAGCAT	-21	True	NA	NA	False	NA	NA	NA	44899445	44851119	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44851370_44851709_44851818_44852408_44852563_44853295_44853391_44853516_44853636_44854268_44854357_44854555_44854683_44854917_44855005_44857074_44857158_44859079_44859182_44859904_44860046_44860431_44860544_44862712_44862907_44863654_44863783_44864929_44865066_44867806_44867898_44868286_44868351_44872445_44872571_44875933_44876101_44879555_44879639_44880553_44880645_44881686_44881723_44883092_44883159_44883648_44883725_44885255_44885335_44886584_44886751_44899368
H1_mix_00039918	chr17	-	1287	4	FSM	ENSG00000131095.14	ENST00000585543.6	594	4	-4	-689	-4	369	multi-exon	FALSE	canonical	2	7	junction_1	0.942809041582063	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGGGGATCTGTTGTG	5397	False	NA	NA	False	NA	NA	NA	44911519	44906515	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44907389_44908063_44908150_44910614_44910659_44911235
H1_mix_00039919	chr17	-	4457	16	NNC	ENSG00000186185.14	novel	4088	16	NA	NA	39	0	intron_retention	FALSE	canonical	2	2	junction_8	62.0743640053337	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTGTGTCTCTCTGTA	-18	True	NA	-4	True	AATAAA	-15	NA	44947734	44924710	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_44926500_44926988_44927079_44928025_44928579_44928818_44929025_44931601_44931730_44932055_44932243_44932672_44932774_44932911_44932987_44933097_44933243_44933922_44934100_44934232_44934431_44934506_44934618_44934830_44934936_44935258_44935417_44936031_44936359_44947627
H1_mix_00039920	chr17	-	4057	16	NNC	ENSG00000186185.14	novel	4088	16	NA	NA	39	-1	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_4	50.3699204772937	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGTGTGTGTCTCTCTGT	-18	True	NA	-5	True	AATAAA	-14	NA	44947734	44924711	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_44926187_44926413_44926500_44926988_44927079_44928025_44928552_44928818_44929025_44931601_44931730_44932055_44932243_44932672_44932774_44932911_44932987_44933922_44934100_44934232_44934431_44934506_44934618_44934830_44934936_44935258_44935417_44936031_44936359_44947627
H1_mix_00039923	chr17	-	477	3	NIC	ENSG00000233483.3	novel	1086	8	NA	NA	1	17	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	2	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGGCTGCGGGTGGCTGC	5	True	NA	1	True	AGTAAA	-17	NA	45248338	45247363	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_45247517_45247882_45248049_45248180
H1_mix_00039924	chr17	-	4518	15	FSM	ENSG00000006062.18	ENST00000376926.8	4583	15	64	1	64	-1	multi-exon	FALSE	canonical	3	26	junction_6	4.05069910821652	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGGCCATCGGTGTCCT	NA	False	NA	-8	True	AATAAA	-22	NA	45290912	45263128	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_45264801_45265162_45265264_45266536_45266682_45267091_45267199_45267405_45267760_45270412_45270564_45271057_45271222_45273502_45273608_45274122_45274255_45274463_45274594_45284811_45284950_45286430_45287046_45287153_45287365_45289235_45289306_45290489
H1_mix_00039925	chr17	-	466	3	FSM	ENSG00000159314.12	ENST00000581991.1	466	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGCCTGTGACTGGGGC	9821	False	NA	NA	False	NA	NA	NA	45396163	45395454	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_45395634_45395743_45395850_45395982
H1_mix_00039926	chr17	-	2605	16	FSM	ENSG00000159314.12	ENST00000532891.6	2604	16	0	-1	0	0	multi-exon	FALSE	canonical	2	6	junction_15	11.5700763466222	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGCCTGTGACTGGGGC	2645	False	NA	NA	False	NA	NA	NA	45430279	45395454	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_45395634_45395743_45395850_45395982_45396118_45396206_45396285_45396486_45396586_45396667_45396791_45396915_45397025_45397948_45398048_45402713_45402819_45403618_45403710_45404028_45404097_45404444_45404529_45404600_45404682_45404923_45405107_45405675_45406084_45429622
H1_mix_00039929	chr17	-	9095	8	FSM	ENSG00000120071.15	ENST00000572218.5	9095	8	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_7	14.3398972472338	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGTACCAGGCCTTTC	406	False	NA	-14	True	AATAAA	-17	NA	46046121	46029915	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_46031704_46032046_46032300_46033079_46033193_46033402_46033461_46034160_46034286_46038537_46038687_46039026_46039216_46039701
H1_mix_00039930	chr17	-	5440	15	NIC	ENSG00000120071.15	novel	5574	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	28.2247720115157	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGTGTACCAGGCCTT	-4	True	NA	-16	True	AATAAA	-15	NA	46193429	46029917	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_46031704_46032046_46032168_46033079_46033193_46033402_46033461_46034160_46034286_46038537_46038687_46039026_46039216_46039701_46039885_46050532_46050705_46066536_46066733_46067548_46067668_46082440_46082543_46094559_46094702_46170854_46172233_46192822
H1_mix_00039934	chr17	-	249	1	NIC	ENSG00000120071.15	novel	1724	5	NA	NA	14333	-3738	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGAGACCCCGTCTCTGTT	6054	False	NA	NA	False	NA	NA	NA	46156890	46156641	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_46156600_46156900
H1_mix_00039936	chr17	-	2383	4	FSM	ENSG00000185829.18	ENST00000622488.6	524	4	0	-1859	0	1859	multi-exon	FALSE	canonical	3	18	junction_1	71.5122367151245	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCTTGGATGCCCTGCA	8	False	NA	NA	False	NA	NA	NA	46579673	46526825	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_46528860_46570758_46570870_46576174_46576340_46579600
H1_mix_00039937	chr17	-	3520	4	NNC	ENSG00000108379.10	novel	3287	5	NA	NA	46882	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	9.53356643071673	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATACATTGTACACTGTG	-1	True	NA	-12	True	ATTAAA	-23	NA	46771810	46762505	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_46764622_46768311_46768800_46769782_46770049_46771160
H1_mix_00039938	chr17	-	279	3	FSM	ENSG00000108379.10	ENST00000572508.1	734	3	284	171	259	-171	multi-exon	FALSE	canonical	1	1	junction_1	1	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCCTCACCTTCTAGAAC	319	False	NA	NA	False	AATAAA	-38	NA	46832774	46830765	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_46830919_46831447_46831563_46832763
H1_mix_00039939	chr17	-	3268	19	NIC	ENSG00000004897.12	novel	3177	19	NA	NA	-14	-8	combination_of_known_junctions	FALSE	canonical	3	21	junction_11	35.3954729615644	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCAAAGTGTTGATCATT	3	True	NA	-13	True	NA	NA	NA	47189278	47120262	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_47121018_47122443_47122601_47123885_47123961_47129392_47129522_47132256_47132375_47137151_47137361_47138738_47138892_47141852_47142023_47142228_47142437_47143882_47143983_47151805_47151937_47154671_47154787_47156912_47157125_47157229_47157385_47158205_47158304_47169916_47170043_47171916_47172065_47181561_47181638_47189145
H1_mix_00039943	chr17	-	242	1	FSM	ENSG00000239291.1	ENST00000488906.1	803	1	517	44	517	-44	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCGTACAGAGGACCCGG	NA	False	NA	NA	False	NA	NA	NA	47159476	47159234	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_47159200_47159500
H1_mix_00039945	chr17	-	2017	6	ISM	ENSG00000006025.12	ENST00000583167.5	4497	11	5959	-1	-1927	0	intron_retention	FALSE	canonical	3	19	junction_1	2.63818119165458	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGCCTGTGACCATTCA	NA	False	NA	-5	True	AATAAA	-13	NA	47811042	47807371	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_47808400_47808537_47808661_47808863_47808991_47809075_47809221_47809333_47809479_47810593
H1_mix_00039946	chr17	-	3668	23	FSM	ENSG00000006025.12	ENST00000007414.8	3664	23	0	-4	0	4	multi-exon	FALSE	canonical	3	12	junction_10	4.52928943764001	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTGTGACCATTCATTGA	-8	True	NA	-1	True	AATAAA	-17	NA	47821794	47807367	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_47808400_47808537_47808661_47808863_47808991_47809075_47809221_47809333_47809479_47810593_47810673_47810771_47810836_47813265_47813404_47813586_47813835_47814520_47814615_47815214_47815353_47816106_47816203_47816387_47816483_47816562_47816696_47816779_47816873_47817255_47817360_47818268_47818387_47818505_47818617_47818985_47819100_47819728_47819783_47819970_47820097_47820203_47820366_47821665
H1_mix_00039947	chr17	-	3738	23	NIC	ENSG00000006025.12	novel	3664	23	NA	NA	1	-1	intron_retention	FALSE	canonical	3	4	junction_10	5.36767952387942	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACTTTGGCCTGTGACCA	7	True	NA	-9	True	AATAAA	-9	NA	47821779	47807375	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_47808400_47808537_47808661_47808863_47808991_47809075_47809221_47809333_47809479_47810593_47810673_47810771_47810836_47813265_47813404_47813586_47813835_47814520_47814708_47815214_47815353_47816106_47816203_47816387_47816483_47816562_47816696_47816779_47816873_47817255_47817360_47818268_47818387_47818505_47818617_47818985_47819100_47819728_47819783_47819970_47820097_47820203_47820366_47821665
H1_mix_00039950	chr17	-	2842	4	ISM	ENSG00000141295.14	ENST00000407215.7	1779	7	149	-4	33	4	intron_retention	FALSE	canonical	3	338	junction_3	11.0855260988773	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGAACTTTATCCCAGGA	9952	False	NA	-11	True	AATAAA	-19	NA	47841140	47837687	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_47838451_47838530_47838697_47838790_47839007_47839443
H1_mix_00039951	chr17	-	1496	6	NIC	ENSG00000141295.14	novel	1745	7	NA	NA	20	4	combination_of_known_junctions	FALSE	canonical	2	6	junction_5	158.272423371856	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGAACTTTATCCCAGGA	9939	False	NA	-11	True	AATAAA	-19	NA	47841153	47837687	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_47838003_47838335_47838451_47838530_47838697_47838790_47839007_47839443_47839644_47840669
H1_mix_00039952	chr17	-	1497	8	FSM	ENSG00000141295.14	ENST00000581645.5	1477	8	0	-20	0	4	multi-exon	FALSE	canonical	3	15	junction_3	116.186338724148	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGAACTTTATCCCAGGA	9917	False	NA	-11	True	AATAAA	-19	NA	47841247	47837687	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_47838003_47838269_47838451_47838530_47838720_47838790_47839007_47839443_47839644_47840190_47840373_47840669_47840844_47841207
H1_mix_00039958	chr17	-	2910	1	FSM	ENSG00000263412.2	ENST00000578660.1	2910	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATACAAAAATTAG	10	True	NA	NA	False	NA	NA	NA	48048050	48045140	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_48045100_48048000
H1_mix_00039959	chr17	-	590	1	FSM	ENSG00000278765.1	ENST00000614061.1	590	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	376	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTTGGCCCTCCTTTGTG	NA	False	NA	-29	True	AATAAA	-24	NA	48067293	48066703	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_48066700_48067300
H1_mix_00039960	chr17	-	348	3	FSM	ENSG00000141293.16	ENST00000579336.1	678	3	330	0	330	0	multi-exon	TRUE	canonical	2	2	junction_1	1	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAGAAAGAAGAAGAAGATA	9402	False	NA	NA	False	GATAAA	-13	NA	48184849	48180091	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_48180249_48182393_48182458_48184722
H1_mix_00039961	chr17	-	583	1	FSM	ENSG00000248278.1	ENST00000504438.1	285	1	210	-508	210	454	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGTAATCTGTCTTTAAGT	NA	False	NA	NA	False	NA	NA	NA	48874988	48874405	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_48874400_48875000
H1_mix_00039967	chr17	-	595	3	NNC	ENSG00000250838.1	novel	428	3	NA	NA	465	83	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	13	84	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCCCTTATCTGACTCT	NA	False	NA	75	True	NA	NA	NA	48997027	48995182	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_48995583_48996417_48996492_48996906
H1_mix_00039972	chr17	-	4017	6	FSM	ENSG00000167085.13	ENST00000508009.6	4017	6	0	0	0	0	multi-exon	FALSE	canonical	3	3120	junction_5	243.19983552626	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCAGACCTTCCGGCTCA	-2	True	NA	-32	True	AATAAA	-4	NA	49414898	49404071	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_49405205_49406758_49409159_49409330_49409474_49411677_49411840_49413176_49413292_49414834
H1_mix_00039974	chr17	-	1468	1	FSM	ENSG00000229944.3	ENST00000422816.1	654	1	114	-928	114	928	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAGTGTACAAAACTGTAA	123	False	NA	NA	False	NA	NA	NA	49424808	49423340	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_49423300_49424800
H1_mix_00039981	chr17	-	2705	7	FSM	ENSG00000167100.15	ENST00000508892.5	2705	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	7.84573486395988	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTTATGATGTGCCAGTG	6312	False	NA	-25	True	NA	NA	NA	50117799	50111335	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_50113049_50113923_50114080_50114186_50114307_50115563_50115724_50115829_50115905_50116002_50116091_50117406
H1_mix_00039986	chr17	-	640	4	FSM	ENSG00000108821.14	ENST00000474644.1	640	4	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_3	29.1318840219212	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGGACCCCCCGGACCCC	-2	True	NA	NA	False	NA	NA	NA	50201632	50199277	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_50199328_50199417_50199591_50199752_50199948_50201410
H1_mix_00039987	chr17	-	2409	1	FSM	ENSG00000279792.1	ENST00000624336.1	2266	1	-103	-40	-103	40	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGCATGCATGCCAGGCA	7852	False	NA	NA	False	AATAAA	-42	NA	50365335	50362926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_50362900_50365300
H1_mix_00039988	chr17	-	4168	6	NNC	ENSG00000154945.7	novel	4166	5	NA	NA	31	21495	intron_retention	FALSE	non_canonical	0	0	junction_1	123.384601956646	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGGAAGGAAGAGAGACC	9	True	NA	NA	False	NA	NA	NA	50707883	50671702	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_50671733_50693194_50696144_50696939_50697122_50699398_50699894_50700567_50700717_50707520
H1_mix_00039989	chr17	-	848	2	FSM	ENSG00000154945.7	ENST00000513072.1	848	2	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGCACAAAACCGGGTCC	6879	False	NA	NA	False	NA	NA	NA	50701098	50699576	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_50699894_50700567
H1_mix_00039990	chr17	-	7801	26	NIC	ENSG00000008294.22	novel	4949	27	NA	NA	13	3	intron_retention	FALSE	canonical	3	29	junction_25	36.706097586096	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTAGTGTGTTTTGTTTT	836	False	NA	-5	True	TATAAA	-22	NA	51046865	50962170	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_50966388_50970706_50970857_50974770_50974948_50977107_50977222_50979745_50979918_50982523_50982673_50984922_50984991_50985697_50985779_50987111_50987238_50989676_50989873_50990449_50990669_50993763_50993936_50995056_50995225_50995443_50995534_50996564_50996695_50998443_50998618_50999660_50999718_51001714_51001846_51005211_51005264_51006084_51006238_51007268_51007327_51014231_51014354_51020158_51020259_51021157_51021366_51041500_51041652_51046499
H1_mix_00039992	chr17	-	5353	17	NNC	ENSG00000011258.16	novel	5365	17	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_13	13.7782380495476	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGATTTGAGCAGTTCTT	36	True	NA	-5	True	AATAAA	-14	NA	51260031	51177424	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_51180695_51192202_51192281_51192781_51193017_51193427_51193511_51195213_51195362_51201591_51201697_51202021_51202078_51202700_51202936_51203139_51203229_51203790_51203926_51206887_51207006_51217333_51217417_51218929_51219045_51220323_51220464_51225007_51225210_51259142_51259207_51259834
H1_mix_00039993	chr17	-	2182	1	FSM	ENSG00000264895.1	ENST00000581917.1	2170	1	243	-255	243	255	mono-exon	FALSE	NA	NA	NA	NA	NA	316	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGATCTAAATAATATAAT	9605	False	NA	NA	False	AAAAAG	-7	NA	51251505	51249323	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_51249300_51251500
H1_mix_00039995	chr17	-	495	3	FSM	ENSG00000166260.13	ENST00000574821.1	495	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGCTAAGTAATAAAATTC	5288	False	NA	-37	True	NA	NA	NA	54963414	54951934	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_54952113_54961118_54961327_54963305
H1_mix_00039997	chr17	-	2590	8	Fusion	ENSG00000262079.1_ENSG00000108960.9	novel	2641	8	NA	NA	0	25	multi-exon	FALSE	canonical	0	0	junction_1	122.414318223492	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACAAGTCTTCTCTACAG	-3	True	NA	NA	False	AGTAAA	-23	NA	55421835	55325731	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr17_-_55325763_55392631_55394535_55401468_55401539_55403766_55403869_55407745_55407821_55411256_55411418_55414150_55414233_55421669
H1_mix_00039998	chr17	-	1195	2	FSM	ENSG00000108960.9	ENST00000577038.1	570	2	-194	-431	-67	431	multi-exon	FALSE	canonical	3	31	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAATGAGAATGTCCTGAT	NA	False	NA	NA	False	AATAAA	-20	NA	55421991	55419660	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_55420534_55421669
H1_mix_00040000	chr17	-	471	3	FSM	ENSG00000121060.19	ENST00000574234.1	471	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	4	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCACATACTGCTCTCAGG	8435	False	NA	NA	False	NA	NA	NA	56895774	56892111	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_56892230_56895342_56895442_56895520
H1_mix_00040002	chr17	-	397	2	FSM	ENSG00000121060.19	ENST00000682509.1	1663	2	0	1266	0	48	multi-exon	FALSE	canonical	3	23	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAACCCGATGGGTCCCCT	9989	False	NA	NA	False	NA	NA	NA	56904451	56901378	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_56901579_56904254
H1_mix_00040004	chr17	-	516	4	FSM	ENSG00000181610.13	ENST00000579380.1	516	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	373.396125671741	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGTTATTTGTGGAAAC	-11	True	NA	NA	False	NA	NA	NA	57850056	57841003	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_57841053_57841182_57841261_57849239_57849411_57849838
H1_mix_00040006	chr17	-	4660	7	NNC	ENSG00000136451.9	novel	4630	6	NA	NA	0	8180	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	95.0182730964009	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAGAGAGATGAAGTTC	-32	True	NA	NA	False	AAAAAG	-1	NA	57988254	57963366	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_57963397_57971551_57974901_57979151_57979314_57980602_57980787_57981872_57981937_57982698_57983394_57988078
H1_mix_00040008	chr17	-	1863	6	NNC	ENSG00000136450.13	novel	1720	4	NA	NA	0	37552	intron_retention	FALSE	non_canonical	0	0	junction_1	905.7066633298	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAGAGAGATGAAGTTC	18	True	NA	NA	False	AAAAAG	-1	NA	58007232	57963366	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_57963397_58003493_58004002_58004922_58005601_58005800_58005974_58006342_58006528_58006943
H1_mix_00040015	chr17	-	2270	6	FSM	ENSG00000266086.3	ENST00000578794.2	2270	6	0	0	0	0	multi-exon	FALSE	canonical	2	73	junction_2	929.15755391645	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCACTTGTTTTTATTTTT	4	True	NA	-2	True	ACTAAA	-26	NA	58007246	57989037	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_57989270_57989648_57989797_58003650_58004002_58004922_58005974_58006342_58006528_58006943
H1_mix_00040020	chr17	-	3022	17	FSM	ENSG00000011143.19	ENST00000677709.1	3018	17	0	-4	0	4	multi-exon	FALSE	canonical	3	112	junction_3	17.9160368106342	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTGTTGGCTGTTTGTC	-14	True	NA	-1	True	CATAAA	-20	NA	58219255	58205436	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_58206171_58206282_58206381_58206464_58206548_58207084_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
H1_mix_00040021	chr17	-	2407	18	FSM	ENSG00000011143.19	ENST00000675753.2	2403	18	0	-4	0	4	multi-exon	FALSE	canonical	2	12	junction_14	35.6368651703478	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTGTTGGCTGTTTGTC	-14	True	NA	-1	True	CATAAA	-20	NA	58219255	58205436	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_58206171_58206282_58206381_58206464_58206548_58207084_58207219_58207893_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214899_58216087_58216244_58216665_58216737_58218619_58218730_58219150
H1_mix_00040022	chr17	-	1467	15	FSM	ENSG00000011143.19	ENST00000580127.6	1467	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	40.1251231799241	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAGGCATTGTGCCATAC	-14	True	NA	-9	True	AATAAA	-21	NA	58219255	58207560	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_58207730_58207893_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
H1_mix_00040025	chr17	-	2321	11	NIC	ENSG00000005379.17	novel	7483	31	NA	NA	130	0	combination_of_known_junctions	TRUE	canonical	3	10	junction_6	10.5147515424759	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGCTGGACTCTCCATG	NA	False	NA	-4	True	AATAAA	-17	NA	58310610	58301230	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_58302448_58305060_58305172_58305386_58305459_58305539_58305644_58305832_58305866_58306341_58306414_58306799_58306969_58307610_58307763_58307841_58307942_58309966_58310159_58310511
H1_mix_00040026	chr17	-	4686	22	NIC	ENSG00000005379.17	novel	7483	31	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_19	10.0070270095149	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGCTGGACTCTCCATG	9798	False	NA	-4	True	AATAAA	-17	NA	58322721	58301230	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_58302448_58304337_58304400_58305060_58305172_58305386_58305459_58305539_58305644_58305832_58305866_58306341_58306387_58306799_58306969_58307610_58307763_58307841_58307942_58309966_58310159_58310511_58310752_58310835_58311214_58311570_58311723_58311891_58312723_58316022_58316133_58316424_58316541_58318279_58318453_58319089_58319295_58320530_58320582_58322307_58322413_58322653
H1_mix_00040029	chr17	-	2276	8	FSM	ENSG00000108375.13	ENST00000581868.1	2610	8	0	334	0	-334	multi-exon	FALSE	canonical	1	1	junction_7	3.65892813567591	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATGCTGGCTAGAGTGCA	3879	False	NA	NA	False	NA	NA	NA	58417085	58357316	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_58358824_58360148_58360252_58360782_58360945_58362543_58362649_58363274_58363407_58363525_58363601_58370910_58371034_58417016
H1_mix_00040030	chr17	-	428	2	FSM	ENSG00000108375.13	ENST00000580014.1	497	2	69	0	7	0	multi-exon	FALSE	canonical	3	3	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGATTTCTTTTGAAATTC	5	True	NA	NA	False	NA	NA	NA	58417526	58417012	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_58417199_58417284
H1_mix_00040031	chr17	-	5473	19	NNC	ENSG00000108389.10	novel	5987	18	NA	NA	-52	-2	at_least_one_novel_splicesite	FALSE	non_canonical	3	22	junction_1	24.0573517420248	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGGGTCGTTTTATTTT	-34	True	NA	-1	True	AATAAA	-21	NA	58514690	58489530	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_58489775_58490346_58491841_58492510_58492600_58492841_58492953_58494931_58496331_58503743_58503899_58504049_58504221_58504302_58504489_58504778_58504975_58505471_58505584_58506742_58506872_58507122_58507320_58508160_58508275_58508467_58508565_58508680_58508842_58511428_58511512_58512389_58512507_58512851_58512942_58514362
H1_mix_00040032	chr17	-	588	2	FSM	ENSG00000108389.10	ENST00000578259.1	588	2	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGTGATACCCTCACCTT	4	False	NA	NA	False	NA	NA	NA	58492738	58491480	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_58491841_58492510
H1_mix_00040036	chr17	-	1381	12	NIC	ENSG00000108387.16	novel	1530	12	NA	NA	12	-4	combination_of_known_junctions	FALSE	canonical	3	8	junction_10	26.4071740815864	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGCTTCTGGTGTCCCTG	13	True	NA	-12	True	AATAAA	-17	NA	58532025	58520261	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_58520486_58520742_58520843_58520997_58521161_58521253_58521351_58521544_58521647_58521735_58521854_58521966_58522102_58525077_58525202_58525694_58525782_58526219_58526314_58531479_58531552_58531960
H1_mix_00040043	chr17	-	4344	25	NNC	ENSG00000108395.14	novel	4489	24	NA	NA	0	35528	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	74.5421091844513	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGGAAAAAGGAAAATAACTT	1	True	NA	NA	False	NA	NA	NA	59106711	58947109	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_58947139_58998206_58999460_59001597_59001715_59012327_59012447_59015609_59015800_59017295_59017425_59028414_59028724_59031895_59032091_59041812_59041899_59047682_59047820_59049177_59049394_59051213_59051329_59056874_59057055_59061031_59061109_59062566_59062649_59064354_59064406_59070822_59070948_59075646_59075715_59079753_59079878_59081096_59081220_59084001_59084090_59088290_59088408_59091299_59091341_59104292_59104395_59106440
H1_mix_00040045	chr17	-	691	3	FSM	ENSG00000182628.13	ENST00000578105.1	689	3	0	-2	0	0	multi-exon	FALSE	canonical	3	25	junction_2	214.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTTTGTAAATTAAAGTAT	9	True	NA	-3	True	CATAAA	-36	NA	59155184	59111885	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_59112346_59119318_59119496_59155130
H1_mix_00040046	chr17	-	440	1	FSM	ENSG00000252212.1	ENST00000516403.1	183	1	22	-279	22	279	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTCTCATCTTTGTTCCA	NA	False	NA	NA	False	NA	NA	NA	59129436	59128996	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_59129000_59129400
H1_mix_00040047	chr17	-	250	2	NNC	ENSG00000265313.7	novel	2361	3	NA	NA	-885	177	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTGGCCGAGGTCTTAG	9669	False	NA	NA	False	AAGAAA	-20	NA	59527831	59430492	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_59430515_59527603
H1_mix_00040048	chr17	-	1769	8	FSM	ENSG00000108423.15	ENST00000340993.10	1769	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	26.4706229158103	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTCAAAGTTCCATTCT	-7	True	NA	NA	False	NA	NA	NA	59892920	59860012	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_59860425_59863663_59863848_59866608_59866750_59878102_59878335_59880893_59881111_59886082_59886231_59890830_59891042_59892696
H1_mix_00040049	chr17	-	1956	6	FSM	ENSG00000108423.15	ENST00000539018.5	1027	6	-6	-923	0	85	multi-exon	FALSE	canonical	3	10	junction_5	32.1409396253439	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAGCAGATATTGATTTT	14	True	NA	72	True	NA	NA	NA	59892899	59859393	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_59860425_59863663_59863848_59866608_59866750_59874538_59874704_59878102_59878335_59892696
H1_mix_00040052	chr17	-	1418	6	ISM	ENSG00000189050.16	ENST00000466544.5	1809	7	1870	-156	75	0	3prime_fragment	FALSE	canonical	2	6	junction_5	20.2741214359587	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGGCTTACTTGATGAT	2195	False	NA	NA	False	ATTAAA	-22	NA	59962891	59952239	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_59953112_59954044_59954147_59956487_59956554_59957223_59957383_59958290_59958445_59962826
H1_mix_00040055	chr17	-	550	4	FSM	ENSG00000068097.16	ENST00000593228.5	550	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	51.2531841829255	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGGTAAGTGGACTATC	9518	False	NA	NA	False	NA	NA	NA	60078912	60072220	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_60072330_60073163_60073280_60076129_60076238_60078695
H1_mix_00040056	chr17	-	1176	3	FSM	ENSG00000267248.4	ENST00000663798.1	1321	3	6	139	2	-139	multi-exon	FALSE	canonical	1	1	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGGTAGAGGCTGTTTCC	-17	True	NA	NA	False	NA	NA	NA	60135677	60128540	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_60128660_60128955_60129091_60134755
H1_mix_00040057	chr17	-	933	1	FSM	ENSG00000213228.5	ENST00000471280.1	490	1	-624	181	-624	-181	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGATCGTCAACCTTGCT	701	False	NA	NA	False	ATTAAA	-23	NA	60434836	60433903	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_60433900_60434800
H1_mix_00040058	chr17	-	515	1	FSM	ENSG00000253506.3	ENST00000521764.3	799	1	263	21	263	-21	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCTTGCTGGAAAAAGAAA	251	False	NA	NA	False	AATAAA	-8	NA	61590956	61590441	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_61590400_61591000
H1_mix_00040059	chr17	-	4306	10	FSM	ENSG00000136492.10	ENST00000682073.1	4306	10	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	14.3896396200552	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTGATTTGCTAAGTCAT	NA	False	NA	NA	False	AATAAA	-45	NA	61784637	61681479	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_61684141_61685835_61686166_61693429_61693513_61715950_61716064_61743012_61743135_61744431_61744592_61776400_61776563_61780260_61780402_61780839_61781006_61784269
H1_mix_00040061	chr17	-	3590	18	NIC	ENSG00000136492.10	novel	6102	21	NA	NA	0	53	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	27.3366808088886	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATTGCACTAGAACAGCA	93	False	NA	NA	False	NA	NA	NA	61863409	61685161	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_61686166_61693429_61693513_61715950_61716064_61743012_61743135_61744431_61744592_61776400_61776563_61780839_61781006_61784269_61784425_61793596_61793730_61799099_61799300_61801252_61801475_61808466_61808758_61847100_61847221_61849128_61849257_61857057_61857232_61859795_61859908_61861446_61861566_61863283
H1_mix_00040063	chr17	-	1070	3	FSM	ENSG00000108510.10	ENST00000583958.1	1068	3	0	-2	0	2	multi-exon	FALSE	canonical	3	11	junction_1	1	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCATTATTCCTTTACTGT	NA	False	NA	-4	True	AATAAA	-18	NA	62030000	62010424	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_62011234_62029540_62029652_62029850
H1_mix_00040064	chr17	-	656	1	FSM	ENSG00000266066.1	ENST00000578759.1	3668	1	3033	-21	3033	21	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGTGTGTAAATAAAGCTC	NA	False	NA	NA	False	NA	NA	NA	62137606	62136950	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_62137000_62137600
H1_mix_00040065	chr17	-	218	2	ISM	ENSG00000263887.7	ENST00000582394.1	1500	11	11566	1611	11566	-1611	internal_fragment	FALSE	canonical	3	81	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTCCAATTTCAGCTTCT	NA	False	NA	NA	False	NA	NA	NA	62285460	62284312	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_62284389_62285318
H1_mix_00040066	chr17	-	1346	1	FSM	ENSG00000274565.1	ENST00000611274.1	1154	1	-64	-128	-64	128	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCACTCGTCTCTTCCCA	397	False	NA	NA	False	NA	NA	NA	62627654	62626308	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_62626300_62627700
H1_mix_00040068	chr17	-	3275	14	NNC	ENSG00000108588.15	novel	3283	13	NA	NA	0	82604	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	202.611938525685	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTCTTCTGGATGGTGA	16	True	NA	NA	False	NA	NA	NA	63773564	63662650	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_63662676_63745254_63746962_63751939_63752108_63752319_63752430_63752740_63752800_63754432_63754519_63756239_63756351_63756468_63756571_63760913_63760980_63761229_63761352_63764015_63764191_63764739_63764848_63765911_63766195_63773411
H1_mix_00040072	chr17	-	2788	9	FSM	ENSG00000266173.7	ENST00000392950.9	2778	9	0	-10	0	0	multi-exon	FALSE	canonical	3	41	junction_7	39.8708853676464	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATTGTGTCTGCGTCAG	NA	False	NA	-18	True	ATTAAA	-25	NA	63741986	63702831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63728357_63728414_63741740
H1_mix_00040073	chr17	-	1925	11	FSM	ENSG00000266173.7	ENST00000640086.1	1925	11	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_2	48.8114740609214	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTAGTTTCGTTGTCAG	-5	True	NA	-73	True	NA	NA	NA	63741815	63702886	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_63703752_63704004_63704048_63704431_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63728357_63728414_63741740
H1_mix_00040078	chr17	-	908	5	FSM	ENSG00000108592.17	ENST00000583202.5	908	5	0	0	0	0	multi-exon	FALSE	canonical	3	553	junction_3	39.2109678533953	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGTAAGTGATGGGGCCT	5640	False	NA	NA	False	AAGAAA	-3	NA	63822023	63820258	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_63820439_63820838_63821116_63821353_63821644_63821722_63821844_63821983
H1_mix_00040086	chr17	-	566	5	FSM	ENSG00000178607.17	ENST00000584041.1	566	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	2.69258240356725	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAACCCTTTCTTTCCTGGG	-3	True	NA	NA	False	NA	NA	NA	64130142	64075076	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64075248_64079661_64079735_64080774_64080809_64098120_64098242_64129975
H1_mix_00040088	chr17	-	2483	1	FSM	ENSG00000178607.17	ENST00000606895.2	4717	1	18	2216	18	-2216	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTCAGGCCGGGCCCGG	14	False	NA	NA	False	NA	NA	NA	64130801	64128318	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64128300_64130800
H1_mix_00040089	chr17	-	5232	12	FSM	ENSG00000136478.9	ENST00000258991.7	5232	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_8	25.2154353882336	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCGTAACTGAGGGGGTAG	39	True	NA	NA	False	TTTAAA	-14	NA	64263227	64147226	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64149092_64150840_64150962_64152944_64153155_64154841_64154968_64160800_64160934_64171099_64171200_64177324_64177472_64188167_64188437_64193558_64193890_64194894_64195096_64212573_64214243_64263167
H1_mix_00040090	chr17	-	1724	3	FSM	ENSG00000136478.9	ENST00000584498.5	5124	3	0	3400	0	3	multi-exon	FALSE	canonical	3	84	junction_2	12	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACCTCTAGTGTTATCT	NA	False	NA	NA	False	AAGAAA	-19	NA	64156234	64150840	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64150962_64152944_64153155_64154841
H1_mix_00040091	chr17	-	555	4	FSM	ENSG00000136478.9	ENST00000577489.1	555	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	36.1140169770994	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGCGGACAGCGATGAGG	NA	False	NA	NA	False	NA	NA	NA	64188454	64154946	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64154968_64171099_64171200_64177324_64177472_64188167
H1_mix_00040092	chr17	-	1233	5	FSM	ENSG00000256525.8	ENST00000582501.5	925	5	-156	-152	-156	0	multi-exon	FALSE	canonical	3	15	junction_4	60.2178337371912	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATAATAAATATTCTTCT	9409	False	NA	-33	True	NA	NA	NA	64487630	64477811	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64477989_64480288_64480390_64482918_64483000_64485727_64485869_64486897
H1_mix_00040094	chr17	-	376	4	FSM	ENSG00000256525.8	ENST00000578687.5	376	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	69.7678690770727	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGAACTGTTTTTATCCA	9099	False	NA	NA	False	AAAAAG	-10	NA	64492910	64486988	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64487069_64490795_64490970_64492666_64492773_64492894
H1_mix_00040096	chr17	-	4912	12	FSM	ENSG00000108654.16	ENST00000580026.6	4908	12	0	-4	0	1	multi-exon	FALSE	canonical	3	133	junction_11	1146.5673526727	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTTTTTATTTATTTG	963	False	NA	-2	True	AATAAA	-19	NA	64505950	64498252	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64500327_64500548_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64505745
H1_mix_00040097	chr17	-	5212	11	FSM	ENSG00000108654.16	ENST00000678110.1	5208	11	0	-4	0	1	multi-exon	FALSE	canonical	3	3649	junction_8	229.059402775787	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTTTTTATTTATTTG	564	False	NA	-2	True	AATAAA	-19	NA	64506349	64498252	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64500327_64500548_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075
H1_mix_00040098	chr17	-	5346	11	FSM	ENSG00000108654.16	ENST00000678810.1	5342	11	0	-4	0	1	multi-exon	FALSE	canonical	3	3649	junction_8	229.35091017914	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTTTTTATTTATTTG	414	False	NA	-2	True	AATAAA	-19	NA	64506499	64498252	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64500327_64500548_64502070_64502161_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075
H1_mix_00040099	chr17	-	5721	10	FSM	ENSG00000108654.16	ENST00000585317.2	5718	10	0	-3	0	0	multi-exon	FALSE	canonical	3	3649	junction_7	216.252824144836	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTCTTTTTATTTATTT	414	False	NA	-3	True	AATAAA	-18	NA	64506499	64498253	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64500327_64500548_64502070_64502161_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075
H1_mix_00040108	chr17	-	424	3	NNC	ENSG00000266820.1	novel	848	6	NA	NA	8136	41823	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCGTGGTGGCTCACACCT	NA	False	NA	NA	False	ATTAAA	-35	NA	64750467	64708094	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_64708126_64749678_64750009_64750404
H1_mix_00040110	chr17	-	3964	12	ISM	ENSG00000214176.10	ENST00000578036.5	4318	18	-4	4747	-4	1253	5prime_fragment	FALSE	canonical	2	7	junction_7	6.93297307815913	422	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGGGTTTGCTGGTCTC	11	True	NA	NA	False	NA	NA	NA	64837143	64784005	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_64785368_64786566_64786725_64787247_64787312_64792348_64792543_64797263_64797410_64799999_64800918_64804829_64805101_64821766_64822053_64822253_64822394_64824624_64824873_64829160_64829250_64837055
H1_mix_00040111	chr17	-	5509	12	FSM	ENSG00000176809.11	ENST00000319651.9	5537	12	34	-6	34	0	multi-exon	FALSE	canonical	2	3	junction_2	10.1093198142822	267	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTTGGTTCATCAAGCAC	1212	False	NA	-3	True	ATTAAA	-23	NA	64897626	64854363	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64854645_64855839_64855890_64858778_64858884_64859441_64860974_64862899_64863019_64868461_64868537_64869094_64869167_64886085_64886167_64886814_64886887_64889680_64889753_64892528_64892601_64894648
H1_mix_00040112	chr17	-	760	4	FSM	ENSG00000214174.9	ENST00000689168.1	717	4	-55	12	-55	0	multi-exon	FALSE	canonical	3	29	junction_3	83.5915997906222	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCTTCTCATCTTACTG	351	False	NA	72	True	AATAAA	-15	NA	64975672	64968037	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64968382_64972533_64972663_64972753_64972928_64975559
H1_mix_00040113	chr17	-	4266	10	NIC	ENSG00000168646.14	novel	4060	10	NA	NA	-68	-7	combination_of_known_junctions	FALSE	canonical	3	15	junction_9	43.2292196563709	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTCAAAACACTGGCCT	-2	True	NA	-16	True	ATTAAA	-8	NA	65560364	65528573	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_65530103_65533911_65534080_65535625_65535722_65536319_65536554_65537323_65537836_65538202_65538344_65541454_65541558_65549519_65549661_65557805_65558737_65559953
H1_mix_00040114	chr17	-	4466	10	NIC	ENSG00000168646.14	novel	4060	10	NA	NA	212	-7	combination_of_known_junctions	FALSE	canonical	3	53	junction_4	34.0090764936453	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTCAAAACACTGGCCT	213	False	NA	-16	True	ATTAAA	-8	NA	65561435	65528573	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_65530103_65533911_65534080_65535625_65535722_65536319_65536554_65537323_65537836_65538202_65538344_65541454_65541558_65549519_65549661_65557805_65558737_65560824
H1_mix_00040118	chr17	-	97	1	FSM	ENSG00000263690.2	ENST00000582790.2	97	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAGTTTAAAAGGAAAA	6925	False	NA	NA	False	AATAAA	-2	NA	67471585	67471488	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_67471500_67471600
H1_mix_00040119	chr17	-	1535	3	FSM	ENSG00000186665.10	ENST00000334461.7	1535	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	22.5	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAGCAATAAATCTTGAC	2801	False	NA	-54	True	NA	NA	NA	67993649	67991129	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_67992104_67992900_67993236_67993423
H1_mix_00040120	chr17	-	1175	1	FSM	ENSG00000265100.1	ENST00000577698.1	1310	1	233	-98	233	98	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCGCCTATCTCCCGACA	214	False	NA	NA	False	NA	NA	NA	68247705	68246530	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_68246500_68247700
H1_mix_00040122	chr17	-	780	7	FSM	ENSG00000070540.13	ENST00000586815.1	780	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	61.3152147150734	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACGGTACACATCTTCAA	-21	True	NA	NA	False	NA	NA	NA	68457513	68433508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_68433576_68435619_68435713_68436381_68436480_68444492_68444590_68450727_68450898_68452909_68452993_68457341
H1_mix_00040125	chr17	-	520	4	FSM	ENSG00000154265.16	ENST00000589975.5	1095	4	0	575	0	-575	multi-exon	FALSE	canonical	2	6	junction_1	5.43650214343336	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTATTTTAACTTGTGA	7269	False	NA	NA	False	NA	NA	NA	69309320	69304668	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_69304811_69306724_69306955_69308279_69308369_69309261
H1_mix_00040127	chr17	-	2094	3	FSM	ENSG00000227036.9	ENST00000649793.2	2208	3	61	53	0	-4	multi-exon	FALSE	canonical	0	0	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGGCTTTCTTTTTGCA	13	False	NA	NA	False	NA	NA	NA	72592791	72403374	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_72404817_72428235_72428299_72592202
H1_mix_00040131	chr17	-	6163	13	ISM	ENSG00000069188.17	ENST00000424778.1	4638	27	28748	-3561	-16694	6	3prime_fragment	FALSE	canonical	2	6	junction_4	3.17433282579015	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAACATTCTTTTCCTTC	NA	False	NA	-5	True	AATAAA	-21	NA	73385907	73334377	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_73338941_73348598_73348726_73350236_73350376_73350649_73350791_73352472_73352638_73358078_73358205_73361683_73361846_73365257_73365396_73368406_73368594_73379176_73379293_73379447_73379550_73383875_73384012_73385846
H1_mix_00040141	chr17	-	1768	12	FSM	ENSG00000161513.12	ENST00000582944.5	1766	12	0	-2	0	0	multi-exon	FALSE	canonical	2	11	junction_9	52.0374944289815	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAGGTTGGGAACATGCT	1	True	NA	-48	True	NA	NA	NA	74872985	74862541	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_74862948_74863075_74863247_74863895_74864068_74864147_74864348_74864479_74864565_74864823_74864932_74865718_74865821_74866130_74866245_74866445_74866545_74866783_74866877_74872035_74872134_74872865
H1_mix_00040149	chr17	-	2195	2	FSM	ENSG00000167863.12	ENST00000580649.1	2191	2	0	-4	0	4	multi-exon	FALSE	canonical	3	2778	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTGTGCTTCTTCTCTGT	5770	False	NA	-14	True	ATTAAA	-20	NA	75041198	75038858	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75039064_75039208
H1_mix_00040150	chr17	-	921	4	FSM	ENSG00000125458.7	ENST00000582744.5	921	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	215.146978185198	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAACCAGTCGGGACCTT	4484	False	NA	-48	True	AATACA	-4	NA	75131473	75130270	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75130643_75130752_75130868_75130964_75131106_75131180
H1_mix_00040152	chr17	-	1614	5	FSM	ENSG00000189159.16	ENST00000482348.5	1614	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	803.203702369455	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGTTGCTTCAAGTAAAC	1246	False	NA	-43	True	NA	NA	NA	75153293	75135285	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75136251_75146665_75146685_75147555_75147654_75148528_75148672_75152904
H1_mix_00040156	chr17	-	5158	14	FSM	ENSG00000125447.18	ENST00000613421.4	5156	14	0	-2	0	0	multi-exon	FALSE	canonical	3	247	junction_5	46.5790668375357	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGAATCTTCCTAGTAT	-13	True	NA	-6	True	AATAAA	-15	NA	75261623	75236599	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75238390_75238651_75238763_75238913_75239084_75239374_75239572_75239788_75241058_75241399_75241517_75241614_75242474_75242830_75242912_75243062_75243167_75243446_75243571_75244618_75244718_75246508_75246585_75246711_75246797_75261547
H1_mix_00040157	chr17	-	3353	18	NIC	ENSG00000125447.18	novel	3670	18	NA	NA	5	-5	combination_of_known_junctions	FALSE	canonical	1	5	junction_2	105.016096970119	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGTACTTGGAATCTTC	9655	False	NA	-13	True	AATAAA	-8	NA	75261580	75236606	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_75237797_75237981_75238091_75238651_75238763_75238913_75239084_75239374_75239572_75239788_75240109_75240341_75240413_75240811_75241058_75241399_75241517_75241614_75241697_75242335_75242474_75242830_75242912_75243062_75243167_75243446_75243571_75244618_75244718_75246508_75246585_75246711_75246797_75261547
H1_mix_00040160	chr17	-	1531	7	FSM	ENSG00000125457.15	ENST00000577542.5	1531	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	71.3130812372846	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAATTTTCTAATAAATC	13	True	NA	NA	False	NA	NA	NA	75271155	75266263	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75266968_75267537_75267631_75267745_75267902_75268082_75268193_75269346_75269470_75270113_75270246_75270942
H1_mix_00040161	chr17	-	524	5	NNC	ENSG00000125457.15	novel	1345	5	NA	NA	6	8	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	72.2439443829031	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAGAAAATGAATGGGCAG	996	False	NA	NA	False	NA	NA	NA	75270239	75266924	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_75266968_75267537_75267631_75267745_75267898_75268082_75268193_75270113
H1_mix_00040167	chr17	-	687	4	FSM	ENSG00000177885.15	ENST00000578961.5	687	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	494.698112208064	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTGAAAAATGTAAAACACAT	39	True	NA	-12	True	AAGAAA	-1	NA	75393803	75320340	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75320554_75325897_75326021_75332699_75332798_75393550
H1_mix_00040168	chr17	-	4496	18	NIC	ENSG00000108469.15	novel	3669	20	NA	NA	-8	8	intron_retention	TRUE	canonical	3	17	junction_4	21.6635167615396	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTATTTCCTCAGCAGCT	-14	True	NA	1	True	NA	NA	NA	75667197	75626836	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_75627523_75627622_75627693_75628217_75628443_75628671_75628826_75628933_75629843_75630183_75630278_75630618_75630693_75630778_75630838_75630973_75631011_75631149_75631250_75631449_75631669_75651185_75651266_75658297_75658461_75660954_75661067_75661605_75661709_75662478_75662998_75665050_75665173_75666427
H1_mix_00040174	chr17	-	842	2	FSM	ENSG00000132475.10	ENST00000589949.1	842	2	0	0	0	0	multi-exon	FALSE	canonical	3	13122	junction_1	0	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGACTGTTCACAGACCT	5777	False	NA	33	True	NA	NA	NA	75779766	75778452	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75779185_75779656
H1_mix_00040176	chr17	-	583	4	FSM	ENSG00000132475.10	ENST00000589599.5	576	4	0	-7	0	0	multi-exon	TRUE	canonical	1	2	junction_3	7353.07640832507	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATTCTGTAAAATACTT	-3	True	NA	-81	True	NA	NA	NA	75779780	75778566	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75778724_75778809_75778964_75779046_75779185_75779646
H1_mix_00040181	chr17	-	3589	4	FSM	ENSG00000132471.12	ENST00000587642.5	3718	4	129	0	129	0	multi-exon	FALSE	canonical	3	454	junction_1	49.5244047583276	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTTTGCTGAAAATGTG	3101	False	NA	-12	True	AATAAA	-17	NA	75852221	75845743	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75846788_75846907_75848663_75849603_75849740_75851567
H1_mix_00040182	chr17	-	2313	6	FSM	ENSG00000132481.7	ENST00000587339.2	1907	6	-406	0	-21	0	multi-exon	FALSE	canonical	3	15	junction_5	12.7027556065603	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCCTTTTCCATCCTCT	10	False	NA	NA	False	AATAAA	-16	NA	75878602	75874163	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75875124_75875399_75875475_75875900_75876100_75876261_75876493_75876717_75876814_75877850
H1_mix_00040200	chr17	-	1941	15	FSM	ENSG00000167881.15	ENST00000592704.5	1941	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	228.349579838118	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTCTTAAGCAGCGTGTC	9	True	NA	2	True	NA	NA	NA	76072497	76039550	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_76039934_76040418_76040475_76040902_76040979_76043828_76043959_76045291_76045387_76046037_76046195_76047905_76047971_76050427_76050527_76057402_76057544_76060307_76060391_76061109_76061220_76061491_76061575_76063975_76064172_76067216_76067331_76072344
H1_mix_00040204	chr17	-	5562	20	NNC	ENSG00000141576.16	novel	5054	19	NA	NA	-428	5	intron_retention	FALSE	canonical	1	4	junction_18	20.8357247011645	2527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGAGCTTATCTGTGAA	NA	False	NA	-6	True	AATAAA	-31	NA	76240921	76142459	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_76145354_76152354_76152466_76154282_76154329_76155251_76155318_76155561_76155735_76156209_76156322_76158392_76158502_76159334_76159574_76161534_76161648_76161842_76162003_76162551_76162624_76164747_76164796_76165501_76165546_76166460_76166528_76167008_76167127_76167650_76167798_76173701_76173791_76175747_76175814_76212363_76212483_76240152
H1_mix_00040205	chr17	-	478	2	FSM	ENSG00000141576.16	ENST00000589317.1	568	2	90	0	90	0	multi-exon	FALSE	canonical	3	58	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTGCAGGGACTCTGGA	NA	False	NA	NA	False	AATGAA	-16	NA	76152493	76145014	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_76145354_76152354
H1_mix_00040220	chr17	-	1359	4	FSM	ENSG00000161547.17	ENST00000585202.5	1359	4	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	993.328076048728	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGAATATGTCTCGGTC	585	False	NA	-10	True	ATTAAA	-23	NA	76737308	76734122	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_76734563_76735060_76735159_76736153_76736465_76736798
H1_mix_00040222	chr17	-	1518	3	FSM	ENSG00000161547.17	ENST00000582449.5	1518	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	19.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTTTCTTGGTGTTAG	1338	False	NA	-34	True	NA	NA	NA	76736555	76734146	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_76735159_76735771_76735876_76736153
H1_mix_00040225	chr17	-	3193	2	FSM	ENSG00000141524.17	ENST00000589217.1	3192	2	0	-1	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCGATGCATGTTCTTCA	NA	False	NA	2	True	AATAAA	-22	NA	78111799	78107396	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_78107841_78109050
H1_mix_00040227	chr17	-	2813	20	NIC	ENSG00000141524.17	novel	8387	20	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_19	61.6044931267777	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGTCCCTTGGGGCT	-3	True	NA	-16	True	ATTAAA	-14	NA	78128753	78112921	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_78113212_78113547_78113625_78117268_78117348_78117467_78117645_78117801_78117936_78118970_78119047_78119296_78119393_78120652_78120833_78121012_78121165_78121555_78121712_78122604_78122750_78123988_78124180_78124523_78124782_78124888_78124986_78125157_78125264_78125725_78125885_78126276_78126367_78126523_78126649_78126776_78126907_78128658
H1_mix_00040241	chr17	-	2043	3	FSM	ENSG00000108679.13	ENST00000588508.1	882	3	-28	-1133	-28	2	multi-exon	FALSE	canonical	3	395	junction_1	2	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTTGTACAGAAAGTGT	4917	False	NA	-13	True	ATTAAA	-21	NA	78975025	78971252	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_78972705_78972969_78973223_78974687
H1_mix_00040244	chr17	-	1714	10	NIC	ENSG00000167281.20	novel	1519	15	NA	NA	0	597	combination_of_known_splicesites	FALSE	canonical	2	9	junction_7	31.1571088533382	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCATGGGAGGACGAAGG	251	False	NA	NA	False	NA	NA	NA	79183472	79090202	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_79090886_79094450_79094530_79095512_79095575_79096652_79096693_79097291_79097425_79097691_79097746_79101583_79101645_79106650_79106789_79115493_79115749_79183263
H1_mix_00040268	chr17	-	1370	3	ISM	ENSG00000167302.11	ENST00000571115.1	551	4	30	-765	30	-213	intron_retention	FALSE	canonical	3	100	junction_1	3.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTCTTGTCCGGGCTGCC	7442	False	NA	NA	False	NA	NA	NA	81231647	81228491	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_81229477_81230543_81230679_81231397
H1_mix_00040273	chr17	-	896	5	FSM	ENSG00000157637.13	ENST00000540966.5	896	5	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_3	77.9358710735949	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGGCAGGGCCAGGAGCAG	NA	False	NA	NA	False	NA	NA	NA	81252273	81246177	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81246674_81246884_81247062_81250069_81250094_81251492_81251613_81252194
H1_mix_00040275	chr17	-	6192	8	NIC	ENSG00000185504.17	novel	3822	9	NA	NA	0	92	intron_retention	FALSE	canonical	0	0	junction_3	63.4301801597791	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCTCTGAGGAAGACGCG	3	True	NA	91	True	NA	NA	NA	81553127	81539792	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_81540951_81541308_81541396_81544003_81544121_81545745_81545883_81546908_81549363_81550247_81551204_81551731_81552053_81552165
H1_mix_00040282	chr17	-	963	2	FSM	ENSG00000204237.5	ENST00000571757.1	923	2	0	-40	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGAAGAATTAGTTACTGA	-29	True	NA	-67	True	NA	NA	NA	81666633	81665100	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81665585_81666154
H1_mix_00040291	chr17	-	2775	4	FSM	ENSG00000225663.8	ENST00000574190.5	2775	4	0	0	0	0	multi-exon	FALSE	canonical	3	928	junction_3	35.873233599564	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCGAGGGTCTGTGAATA	8946	False	NA	-55	True	NA	NA	NA	81826194	81822453	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81823312_81823411_81823514_81824286_81824406_81824498
H1_mix_00040292	chr17	-	3428	4	FSM	ENSG00000225663.8	ENST00000570507.5	765	4	-2291	-372	-175	0	multi-exon	FALSE	canonical	3	23	junction_3	462.233947500854	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGCACTGGGCGTGGCCT	8303	False	NA	-30	True	AATAAA	-4	NA	81826837	81822428	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81823312_81823411_81823514_81824286_81824391_81824498
H1_mix_00040294	chr17	-	2898	9	FSM	ENSG00000185624.16	ENST00000680719.1	2879	9	0	-19	0	2	multi-exon	FALSE	canonical	3	2201	junction_3	147.640399281497	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTCGGGTTTATGATC	9865	False	NA	-1	True	AATAAA	-22	NA	81859718	81843156	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81844093_81845143_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180
H1_mix_00040295	chr17	-	2299	10	FSM	ENSG00000185624.16	ENST00000576390.6	2288	10	0	-11	0	2	multi-exon	FALSE	canonical	0	0	junction_3	767.888607533832	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTCGGGTTTATGATC	9445	False	NA	-1	True	AATAAA	-22	NA	81860509	81843156	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
H1_mix_00040296	chr17	-	2519	11	FSM	ENSG00000185624.16	ENST00000681420.1	2510	11	0	-9	0	2	multi-exon	FALSE	canonical	1	3	junction_2	741.837050840682	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTCGGGTTTATGATC	-1	True	NA	-1	True	AATAAA	-22	NA	81860535	81843156	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81844093_81845143_81845304_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
H1_mix_00040297	chr17	-	2839	10	FSM	ENSG00000185624.16	ENST00000679396.1	2822	10	0	-17	0	2	multi-exon	FALSE	canonical	3	2201	junction_3	139.714788845785	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTCGGGTTTATGATC	9356	False	NA	-1	True	AATAAA	-22	NA	81860598	81843156	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81844093_81845143_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
H1_mix_00040298	chr17	-	3907	8	FSM	ENSG00000185624.16	ENST00000680799.1	3905	8	0	-2	0	0	multi-exon	FALSE	canonical	3	2201	junction_1	136.157321971793	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGCCAAATAAAGTTGAAAT	9434	False	NA	-34	True	NA	NA	NA	81860520	81843189	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
H1_mix_00040299	chr17	-	3451	10	FSM	ENSG00000185624.16	ENST00000681020.1	3432	10	0	-19	0	0	multi-exon	FALSE	canonical	3	2201	junction_3	151.494040953578	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGCCAAATAAAGTTGAAAT	9432	False	NA	-34	True	NA	NA	NA	81860522	81843189	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
H1_mix_00040301	chr17	-	2911	9	FSM	ENSG00000185624.16	ENST00000680208.1	2907	9	0	-4	0	0	multi-exon	FALSE	canonical	3	2201	junction_2	128.246588648587	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGCCAAATAAAGTTGAAAT	9379	False	NA	-34	True	NA	NA	NA	81860575	81843189	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81844093_81845143_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
H1_mix_00040303	chr17	-	2289	11	FSM	ENSG00000185624.16	ENST00000681760.1	2289	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	737.087213292973	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTCGTGGGCTCATTGT	9364	False	NA	NA	False	NA	NA	NA	81860590	81843363	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860331
H1_mix_00040304	chr17	-	2253	11	FSM	ENSG00000185624.16	ENST00000570907.6	2253	11	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	738.88551887285	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTGCCAGCCCTGGGGC	9439	False	NA	NA	False	NA	NA	NA	81860515	81843430	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81844093_81845143_81845231_81845459_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
H1_mix_00040305	chr17	-	1862	7	FSM	ENSG00000141522.12	ENST00000579121.5	637	7	-440	-785	-130	0	multi-exon	FALSE	canonical	3	28	junction_6	438.793294793295	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGGGTGTCTGCTGCTT	9882	False	NA	-18	True	AATAAA	-14	NA	81871104	81867720	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81868585_81868988_81869076_81869172_81869237_81869329_81869407_81869541_81869626_81869740_81869958_81870635
H1_mix_00040322	chr17	-	1875	10	FSM	ENSG00000187531.14	ENST00000536038.5	1883	10	9	-1	-5	1	multi-exon	FALSE	canonical	1	2	junction_1	41.9517653655237	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGTGTCCCCGAGTGGTC	-1	True	NA	0	True	ATTAAA	-17	NA	81918167	81911937	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81912615_81913206_81913294_81913773_81913881_81914086_81914168_81914293_81914531_81914603_81914703_81915439_81915513_81915610_81915682_81917614_81917720_81917829
H1_mix_00040338	chr17	-	927	3	FSM	ENSG00000169738.8	ENST00000585085.1	927	3	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_1	522	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAATCCCACTTGGCAAGTT	1	True	NA	NA	False	NA	NA	NA	82037342	82036215	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82036309_82036413_82036764_82036858
H1_mix_00040342	chr17	-	2103	3	ISM	ENSG00000169733.12	ENST00000580793.5	1755	4	-273	0	0	0	intron_retention	FALSE	canonical	3	280	junction_1	2.5	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGCTCCTGTCTTAGTCA	9202	False	NA	-1	True	AGTAAA	-19	NA	82050787	82047901	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_82048808_82049030_82049117_82049676
H1_mix_00040343	chr17	-	2886	1	FSM	ENSG00000169733.12	ENST00000583784.1	2886	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGCTCCTGTCTTAGTCA	9202	False	NA	-1	True	AGTAAA	-19	NA	82050787	82047901	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82047900_82050800
H1_mix_00040344	chr17	-	3107	4	FSM	ENSG00000169733.12	ENST00000582478.5	3107	4	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_3	36.9864840178139	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGCTCCTGTCTTAGTCA	-2	True	NA	-1	True	AGTAAA	-19	NA	82051831	82047901	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82049117_82049676_82050556_82050661_82051343_82051499
H1_mix_00040348	chr17	-	1680	13	NIC	ENSG00000169718.18	novel	2233	14	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	1	84	junction_3	174.352671808225	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGAGAGCCCACAGCCTGT	30	False	NA	-13	True	AATAAA	-13	NA	82065773	82057881	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_82058255_82058340_82058417_82058780_82058819_82060700_82060784_82060864_82060962_82061208_82061354_82061617_82061722_82061900_82061984_82062860_82062974_82063467_82063519_82064125_82064235_82064822_82065070_82065612
H1_mix_00040365	chr17	-	563	6	FSM	ENSG00000178927.18	ENST00000578913.5	563	6	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_5	49.002040773829	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGACTGCCCAGAGCTATG	14	True	NA	NA	False	NA	NA	NA	82450723	82444388	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82444592_82445863_82445961_82446622_82446697_82447579_82447622_82449169_82449293_82450699
H1_mix_00040369	chr17	-	654	6	FSM	ENSG00000141580.16	ENST00000573656.5	654	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	226.076624178618	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAAGGGGGAGTGCATCC	4895	False	NA	NA	False	NA	NA	NA	82625535	82615985	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_82616026_82616523_82616646_82617295_82617398_82619042_82619095_82621608_82621800_82625388
H1_mix_00040375	chr17	+	279	1	Intergenic	novelGene_539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTCAAAAGAAATTTTTAC	NA	False	NA	NA	False	NA	NA	NA	4765155	4765434	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_4765200_4765400
H1_mix_00040377	chr17	+	354	1	Intergenic	novelGene_542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCACCCTCTGTATTTTTA	NA	False	NA	NA	False	AATACA	-41	NA	16745144	16745498	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_16745100_16745500
H1_mix_00040378	chr17	+	871	1	NIC	ENSG00000196712.19	novel	5082	13	NA	NA	4030	-1242	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCCCCATCCATCCTCT	9218	False	NA	NA	False	AATATA	-8	NA	31347037	31347908	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_31347000_31347900
H1_mix_00040379	chr17	+	206	1	Intergenic	novelGene_551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAAACCTAAATGCCTTAT	NA	False	NA	NA	False	NA	NA	NA	34184409	34184615	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_34184400_34184600
H1_mix_00040380	chr17	+	280	1	Intergenic	novelGene_557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAAAAAAAAATATAT	NA	False	NA	NA	False	NA	NA	NA	38945654	38945934	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_38945700_38945900
H1_mix_00040381	chr17	+	909	1	Intergenic	novelGene_562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATTGAGG	7604	False	NA	NA	False	AATAAA	-21	NA	43033107	43034016	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_43033100_43034000
H1_mix_00040383	chr17	+	1781	1	Intergenic	novelGene_569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	51188944	51190725	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_51188900_51190700
H1_mix_00040385	chr17	+	1357	1	Intergenic	novelGene_571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTTCCACCAGTGTTTAA	NA	False	NA	NA	False	NA	NA	NA	60099785	60101142	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_60099800_60101100
H1_mix_00040386	chr17	+	241	1	Intergenic	novelGene_572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGACTGTCTTGGGTG	NA	False	NA	NA	False	NA	NA	NA	60851746	60851987	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_60851700_60852000
H1_mix_00040387	chr17	+	1053	1	Intergenic	novelGene_576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	204	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	62057489	62058542	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_62057500_62058500
H1_mix_00040392	chr17	+	373	3	FSM	ENSG00000167695.15	ENST00000572018.5	373	3	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	62.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCGGATCCTTCTCTTCC	60	False	NA	NA	False	NA	NA	NA	732545	741365	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_732770_733097_733182_741300
H1_mix_00040394	chr17	+	553	3	FSM	ENSG00000167716.19	ENST00000495411.1	553	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	2	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACCCCCAAGGTGACACAC	671	False	NA	NA	False	NA	NA	NA	1731183	1732977	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_1731259_1732324_1732491_1732665
H1_mix_00040395	chr17	+	2144	8	ISM	ENSG00000167711.14	ENST00000382061.5	2262	10	2149	0	2149	0	3prime_fragment	FALSE	canonical	0	0	junction_1	5.2566769979926	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGGTTTGATGTCACC	200	False	NA	1	True	AATAAA	-13	NA	1745174	1755265	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_1745214_1745332_1745396_1745707_1745910_1747018_1747163_1747308_1747513_1748597_1748741_1752585_1752791_1754121
H1_mix_00040398	chr17	+	363	3	NNC	ENSG00000132359.15	novel	3175	26	NA	NA	0	-235425	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	2.5	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAATGCTATGATCTAGG	56	False	NA	2	True	AATAAA	-16	NA	2755704	2772665	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_2755768_2770328_2770446_2772482
H1_mix_00040400	chr17	+	2485	11	NIC	ENSG00000040531.16	novel	4139	12	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	23	junction_4	15.1950649883441	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTAAAACCTACTCGCT	13	True	NA	-9	True	NA	NA	NA	3636736	3661511	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_3636832_3637106_3637317_3640187_3640268_3647443_3647523_3654997_3655102_3655220_3655353_3656486_3656587_3656675_3656796_3658004_3658176_3659857_3659976_3660235
H1_mix_00040401	chr17	+	2392	10	NIC	ENSG00000040531.16	novel	4139	12	NA	NA	4	-1	intron_retention	FALSE	canonical	3	8	junction_3	20.4232982427205	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTAAAACCTACTCGCT	-10	True	NA	-9	True	NA	NA	NA	3636750	3661511	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_3636832_3637106_3637317_3640187_3640268_3654997_3655102_3655220_3655353_3656486_3656587_3656675_3656796_3658004_3658176_3659857_3659976_3660235
H1_mix_00040402	chr17	+	1376	1	FSM	ENSG00000240898.1	ENST00000486753.1	483	1	-856	-37	-856	37	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-13	NA	3664363	3665739	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_3664400_3665700
H1_mix_00040403	chr17	+	439	1	FSM	ENSG00000262519.1	ENST00000575018.1	310	1	-54	-75	-54	75	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATATAAAGCATGAAGACTA	NA	False	NA	NA	False	TTTAAA	-28	NA	4572151	4572590	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4572200_4572600
H1_mix_00040404	chr17	+	1912	8	FSM	ENSG00000188176.12	ENST00000338859.8	1919	8	7	0	7	0	multi-exon	FALSE	canonical	0	0	junction_1	9.63624111659431	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGGTTTGTCATTTCTG	-1	True	NA	9	True	CATAAA	-20	NA	4584005	4608319	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4584099_4592360_4592449_4592928_4593172_4593821_4593898_4595144_4595328_4596859_4596978_4597171_4597324_4607360
H1_mix_00040406	chr17	+	411	2	NNC	ENSG00000244184.1	novel	472	2	NA	NA	57	-7	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAGATTGGGGTCTGCGT	NA	False	NA	0	True	CATAAA	-10	NA	4704286	4705522	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_4704371_4705195
H1_mix_00040407	chr17	+	605	4	FSM	ENSG00000129219.14	ENST00000574268.1	596	4	-9	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	9.28559218478941	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCCCGAGATGCAGGCAA	17	True	NA	NA	False	NA	NA	NA	4807182	4809118	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4807226_4807771_4807882_4807983_4808417_4809099
H1_mix_00040409	chr17	+	3149	5	FSM	ENSG00000141503.17	ENST00000574871.1	3150	5	0	1	0	-1	multi-exon	FALSE	canonical	3	238	junction_1	18.7149672722129	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGGCCGCATGTCCTT	NA	False	NA	10	True	AATAAA	-22	NA	4894543	4898059	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4895243_4895349_4896104_4896192_4896343_4896428_4896589_4896673
H1_mix_00040411	chr17	+	1807	10	NIC	ENSG00000108523.16	novel	1728	11	NA	NA	-7	0	intron_retention	FALSE	canonical	3	175	junction_1	194.385895947237	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTGGACTAAGGAAGGG	6	True	NA	15	True	AATAAA	-8	NA	4940092	4945209	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_4940231_4940486_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
H1_mix_00040413	chr17	+	1512	11	FSM	ENSG00000108515.18	ENST00000518175.1	1448	11	-53	-11	-53	0	multi-exon	FALSE	canonical	1	49	junction_3	33.925801390682	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACAGCTGTGTGCTTCTTTG	586	False	NA	21	True	AATAAA	-17	NA	4951704	4957129	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_4951915_4952794_4952891_4953050_4953110_4953271_4953342_4953711_4953846_4955074_4955298_4955406_4955605_4955941_4956144_4956572_4956682_4956830_4956890_4956977
H1_mix_00040416	chr17	+	2932	4	FSM	ENSG00000167842.16	ENST00000576570.5	945	4	40	-2027	29	148	multi-exon	FALSE	canonical	1	3	junction_1	49.9955553580071	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCCATGTCCTAATTCCT	40	False	NA	NA	False	NA	NA	NA	5486424	5490962	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_5486685_5487556_5487695_5488195_5488590_5488822
H1_mix_00040418	chr17	+	2789	1	FSM	ENSG00000129235.11	ENST00000574429.1	2100	1	729	-1418	95	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGCCAATGTAGAATCT	693	False	NA	-41	True	NA	NA	NA	6641752	6644541	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_6641800_6644500
H1_mix_00040419	chr17	+	700	4	FSM	ENSG00000274114.2	ENST00000603173.6	700	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	6.0184900284226	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGCTAGAATGATCTGAAT	7	True	NA	NA	False	AATAAA	-13	NA	6657303	6658491	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_6657405_6657644_6657784_6657861_6657985_6658154
H1_mix_00040420	chr17	+	3402	7	FSM	ENSG00000132530.17	ENST00000361842.8	3417	7	10	5	1	-5	multi-exon	FALSE	canonical	0	0	junction_2	0.74535599249993	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAGCTGCTCTTCCACCT	-2	True	NA	NA	False	AATAAA	-11	NA	6756055	6775642	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_6756111_6758088_6758225_6759661_6759719_6760405_6760602_6762154_6762241_6770642_6770985_6773112
H1_mix_00040421	chr17	+	443	5	FSM	ENSG00000108839.12	ENST00000480801.1	443	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4.47213595499958	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCATCCAGGTAAGGGCCC	90	False	NA	NA	False	NA	NA	NA	6996981	7000469	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_6997028_6998508_6998591_6998714_6998838_6999408_6999467_7000335
H1_mix_00040424	chr17	+	892	3	FSM	ENSG00000161939.19	ENST00000607564.1	892	3	0	0	0	0	multi-exon	FALSE	canonical	3	670	junction_2	496	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCGGCGGCCGGCGCCGC	117	False	NA	NA	False	NA	NA	NA	7013596	7015073	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7013743_7014144_7014879_7015061
H1_mix_00040426	chr17	+	1615	1	FSM	ENSG00000279641.1	ENST00000624722.1	1615	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATCAAATCACAACA	823	False	NA	NA	False	NA	NA	NA	7242199	7243814	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7242200_7243800
H1_mix_00040428	chr17	+	593	6	FSM	ENSG00000072818.12	ENST00000573893.5	593	6	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	3.44093010681705	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGGGCCAGGTGCGGTG	5604	False	NA	NA	False	NA	NA	NA	7342194	7344123	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7342329_7342415_7342475_7343378_7343563_7343705_7343751_7343860_7343957_7344048
H1_mix_00040429	chr17	+	1498	1	FSM	ENSG00000072818.12	ENST00000570439.1	4898	1	3409	-9	-1577	9	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAATGCCTGAAGGGGC	NA	False	NA	NA	False	NA	NA	NA	7348739	7350237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7348700_7350200
H1_mix_00040430	chr17	+	2704	13	FSM	ENSG00000174292.13	ENST00000688331.1	2761	13	0	57	0	-52	multi-exon	FALSE	canonical	3	7	junction_1	8.35663409114778	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCATACCAACTGCTTCTA	-1	True	NA	-25	True	NA	NA	NA	7381088	7389685	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7381115_7382835_7383090_7383249_7383321_7383424_7383617_7383708_7383865_7383969_7384254_7384483_7384755_7386560_7386656_7386989_7387155_7387377_7387458_7388405_7388705_7388787_7388884_7388970
H1_mix_00040431	chr17	+	5447	9	NNC	ENSG00000169992.10	novel	4374	8	NA	NA	-200	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.82822179150479	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGTGCCTGCTCTGTTGT	19	False	NA	27	True	TATAAA	-13	NA	7404673	7419860	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_7404801_7405033_7405611_7408011_7408713_7412156_7412208_7414343_7414494_7414662_7414849_7414955_7415149_7415580_7416108_7416925
H1_mix_00040432	chr17	+	2776	4	ISM	ENSG00000161958.11	ENST00000575235.5	928	5	6	-1571	6	0	intron_retention	FALSE	canonical	3	15	junction_1	21.6024689946929	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTTCTCAATTAAAGACG	-13	True	NA	-12	True	NA	NA	NA	7438278	7444902	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_7438531_7441470_7441582_7441775_7441880_7442593
H1_mix_00040434	chr17	+	1433	8	NIC	ENSG00000170175.11	novel	1623	10	NA	NA	391	-3	combination_of_known_junctions	FALSE	canonical	3	29	junction_4	32.4011841557354	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGGGATCTTGAAGAAG	417	False	NA	NA	False	NA	NA	NA	7445933	7456923	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_7446114_7446832_7446943_7447042_7447152_7447502_7447651_7454296_7454521_7455283_7455457_7455793_7455942_7456582
H1_mix_00040435	chr17	+	2333	9	ISM	ENSG00000170175.11	ENST00000306071.7	2560	11	873	97	391	-97	3prime_fragment	FALSE	canonical	3	81	junction_7	17.0655903794741	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGGTCTTGTGGTCGTT	417	False	NA	23	True	AATAAA	-32	NA	7445933	7457613	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_7446114_7446832_7446943_7447042_7447152_7447502_7447651_7448578_7448789_7454296_7454521_7455283_7455457_7455793_7455942_7456582
H1_mix_00040437	chr17	+	1898	8	FSM	ENSG00000239697.11	ENST00000322272.11	1625	8	-282	9	-282	0	multi-exon	FALSE	canonical	1	4	junction_5	16.2040559296563	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCATAGTCTCTCTCTT	NA	False	NA	NA	False	ATTAAA	-6	NA	7548775	7557881	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7549313_7549473_7549522_7550119_7550196_7550798_7550853_7550942_7550979_7553586_7553826_7556777_7556903_7557098
H1_mix_00040438	chr17	+	1668	7	NNC	ENSG00000239697.11	novel	1625	8	NA	NA	-282	-3	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	12.4632793972266	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTCTCTCTCTTTATTGG	NA	False	NA	NA	False	ATTAAA	-12	NA	7548775	7557887	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_7549313_7549470_7549522_7550119_7550196_7550798_7550853_7550942_7550979_7556777_7556903_7557098
H1_mix_00040439	chr17	+	1918	11	NNC	ENSG00000161960.16	novel	1758	11	NA	NA	-547	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	3550.36596564354	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAGGCAAAAGAAGGAACC	NA	False	NA	36	True	AATAAA	-10	NA	7572276	7578616	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_7572865_7574259_7574309_7574545_7574679_7575118_7575259_7576523_7576693_7577055_7577166_7577343_7577488_7577568_7577709_7577826_7577917_7578164_7578245_7578341
H1_mix_00040440	chr17	+	918	8	FSM	ENSG00000161960.16	ENST00000578495.5	916	8	-2	0	0	0	multi-exon	FALSE	canonical	3	211	junction_4	3974.8903822647	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTTTGCCCGCTGCCAG	-2	True	NA	NA	False	NA	NA	NA	7572823	7577706	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7572865_7574259_7574309_7574545_7574679_7575118_7575259_7576529_7576693_7577055_7577166_7577343_7577488_7577568
H1_mix_00040441	chr17	+	923	8	ISM	ENSG00000161960.16	ENST00000577269.5	1319	11	-12	935	0	0	5prime_fragment	FALSE	canonical	3	9200	junction_1	1031.46343431385	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTTTGCCCGCTGCCAG	-1	True	NA	NA	False	NA	NA	NA	7572824	7577706	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_7572865_7574259_7574309_7574545_7574679_7575118_7575259_7576523_7576693_7577055_7577166_7577343_7577488_7577568
H1_mix_00040442	chr17	+	919	8	NNC	ENSG00000161960.16	novel	1758	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	462	junction_6	3886.08203091757	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTTTGCCCGCTGCCAG	-1	True	NA	NA	False	NA	NA	NA	7572824	7577706	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_7572865_7574259_7574309_7574545_7574679_7575118_7575259_7576523_7576693_7577055_7577166_7577347_7577488_7577568
H1_mix_00040443	chr17	+	1847	10	NIC	ENSG00000141499.17	novel	2657	11	NA	NA	15	-4	intron_retention	FALSE	canonical	1	1	junction_4	78.4346862045103	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATACTAGAGTCTTCGTGT	31	False	NA	9	True	TATAAA	-11	NA	7688491	7703497	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_7689080_7689223_7689323_7689589_7689702_7700740_7700830_7701426_7701550_7701656_7701790_7702343_7702553_7702742_7702847_7702992_7703128_7703242
H1_mix_00040444	chr17	+	6705	22	FSM	ENSG00000132510.11	ENST00000254846.9	6713	22	8	0	8	0	multi-exon	TRUE	canonical	0	0	junction_1	9.08338794216874	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTTCGCTAACGGCTG	6	False	NA	18	True	AATAAA	-14	NA	7839911	7854796	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_7840025_7844900_7845021_7845313_7845457_7845549_7845692_7845871_7845971_7846077_7846298_7846399_7846493_7846578_7846741_7846818_7847017_7847104_7847453_7847545_7849729_7849820_7849948_7850071_7850178_7851020_7851227_7851329_7851395_7851477_7851550_7851647_7851797_7851950_7852066_7852148_7852337_7852494_7852637_7852999_7853127_7853209
H1_mix_00040447	chr17	+	3519	20	NIC	ENSG00000170037.14	novel	3996	19	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	38.8495927742591	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGTCTCTGGCTCATAG	14	True	NA	17	True	AATAAA	-17	NA	7932213	7949578	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_7932801_7932927_7933350_7934137_7934223_7934464_7934547_7934988_7935146_7936365_7936483_7936700_7936818_7937163_7937263_7939512_7939750_7940095_7940243_7943390_7943525_7944122_7944249_7944475_7944639_7945727_7945987_7947570_7947723_7947915_7947980_7948156_7948328_7948486_7948620_7949084_7949158_7949384
H1_mix_00040448	chr17	+	3572	19	NIC	ENSG00000170037.14	novel	2783	19	NA	NA	29	0	intron_retention	FALSE	canonical	3	20	junction_18	41.1201566625252	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGTCTCTGGCTCATAG	71	False	NA	17	True	AATAAA	-17	NA	7932270	7949578	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_7933350_7934137_7934223_7934464_7934547_7934988_7935146_7936365_7936483_7936700_7936818_7937163_7937263_7939512_7939750_7940095_7940243_7943390_7943525_7944122_7944249_7944475_7944639_7945727_7945987_7947570_7947723_7947915_7947980_7948156_7948328_7948486_7948620_7949081_7949138_7949384
H1_mix_00040450	chr17	+	2671	1	FSM	ENSG00000269947.1	ENST00000602597.1	674	1	-1989	-8	-1989	8	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTCTCCCTCTTTTTTTT	7172	False	NA	26	True	ATTAAA	-31	NA	8275773	8278444	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_8275800_8278400
H1_mix_00040452	chr17	+	4116	16	FSM	ENSG00000198844.12	ENST00000421050.2	4138	16	22	0	22	0	multi-exon	FALSE	canonical	1	1	junction_1	2.82055944017416	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTCTCTGAGGAAGTGTG	22	False	NA	28	True	AGTAAA	-20	NA	8310843	8322514	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_8310864_8311990_8312641_8312921_8313255_8313500_8313556_8314905_8314965_8315065_8315278_8315413_8315575_8315754_8315908_8316018_8316149_8318386_8318462_8318569_8318663_8318749_8318911_8319006_8319160_8319311_8319395_8319498_8319604_8320841
H1_mix_00040455	chr17	+	347	1	FSM	ENSG00000244604.1	ENST00000479856.1	347	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCTGAGTTCTTAAAGAC	25	False	NA	NA	False	NA	NA	NA	8561229	8561576	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_8561200_8561600
H1_mix_00040456	chr17	+	5973	7	FSM	ENSG00000065320.9	ENST00000173229.7	5986	7	13	0	13	0	multi-exon	FALSE	canonical	0	0	junction_2	1.06718737290547	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGTCTCGCAGTCTTGAT	-15	True	NA	19	True	AATAAA	-14	NA	9021522	9244000	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_9021586_9022310_9023392_9162812_9163002_9179806_9179957_9182915_9182970_9221167_9221243_9239639
H1_mix_00040458	chr17	+	533	4	Intergenic	novelGene_540	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	4.24264068711928	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCGACCTCAGGTGAGCC	NA	False	NA	NA	False	AATAAA	-22	NA	10942195	10951863	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_10942314_10945194_10945325_10950484_10950581_10951674
H1_mix_00040459	chr17	+	1496	3	Antisense	novelGene_ENSG00000266368.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	25	junction_2	15	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGTTCT	NA	False	NA	12	True	AATAAA	-18	NA	11972093	11976905	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr17_+_11972336_11973569_11974419_11976500
H1_mix_00040460	chr17	+	3859	12	FSM	ENSG00000065559.15	ENST00000415385.7	3856	12	-5	2	0	0	multi-exon	FALSE	canonical	0	0	junction_1	102.843618748833	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTCCTTTTGGAAGTGT	-19	True	NA	37	True	ATTAAA	-29	NA	12020828	12143828	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_12021002_12032265_12032299_12054888_12054992_12081355_12081531_12095574_12095695_12107789_12107910_12110374_12110427_12113232_12113361_12125293_12125372_12129138_12129288_12139838_12139885_12141146
H1_mix_00040463	chr17	+	8543	14	FSM	ENSG00000141052.18	ENST00000425538.6	8565	14	18	4	18	-4	multi-exon	FALSE	canonical	1	2	junction_6	4.91224770495065	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGTAAAACTTTTTTTT	17	False	NA	NA	False	AATAAA	-17	NA	12665907	12768945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_12666244_12705127_12705194_12715518_12715575_12717345_12717422_12722846_12723009_12736160_12736337_12739202_12739329_12744182_12744437_12745918_12746073_12752413_12753347_12756413_12756558_12758084_12758214_12760649_12760708_12763072
H1_mix_00040464	chr17	+	3779	19	NIC	ENSG00000006740.18	novel	4211	20	NA	NA	-11	0	intron_retention	TRUE	canonical	3	16	junction_16	23.688891494684	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCATCTGTTCTTGCT	49	False	NA	17	True	ATTAAA	-20	NA	12789748	12991643	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_12789892_12894939_12894980_12896406_12896512_12908896_12908974_12915899_12916012_12919754_12919832_12928928_12929047_12941055_12941125_12943587_12943670_12944068_12944197_12949139_12949252_12949648_12949731_12952500_12952582_12955866_12955981_12956654_12956747_12958716_12958898_12980057_12980234_12984530_12984909_12990031
H1_mix_00040465	chr17	+	5501	1	FSM	ENSG00000006740.18	ENST00000584974.1	4428	1	42	-1115	42	-553	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGTCCACTTTGATATT	NA	False	NA	NA	False	NA	NA	NA	12984530	12990031	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_12984500_12990000
H1_mix_00040466	chr17	+	3113	1	ISM	ENSG00000125430.9	ENST00000360954.3	5369	2	45211	0	45209	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGGGTACCTTTATGTT	21	False	NA	4	True	AATAAA	-15	NA	14346291	14349404	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_14346300_14349400
H1_mix_00040467	chr17	+	473	1	FSM	ENSG00000234324.1	ENST00000424673.1	553	1	-78	158	-78	-158	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTCAAACCCAGAAAGATGAA	NA	False	NA	NA	False	AATACA	-43	NA	15443560	15444033	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_15443600_15444000
H1_mix_00040468	chr17	+	355	1	FSM	ENSG00000233979.1	ENST00000453217.1	340	1	48	-63	48	63	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGGGAGACAGACATTGAT	NA	False	NA	NA	False	AATAAA	-19	NA	16084089	16084444	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16084100_16084400
H1_mix_00040469	chr17	+	754	3	FSM	ENSG00000187688.15	ENST00000475513.5	762	3	-9	17	-9	-15	multi-exon	FALSE	canonical	2	3	junction_1	0.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTTCACTAACTAACTC	3037	False	NA	8	True	NA	NA	NA	16433222	16436986	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16433699_16434889_16434970_16436788
H1_mix_00040470	chr17	+	1005	6	FSM	ENSG00000175061.19	ENST00000481898.6	997	6	-12	4	0	0	multi-exon	FALSE	canonical	3	198	junction_2	1310.53766065688	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	8789	False	NA	-16	True	AATAAA	-30	NA	16438974	16442028	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16439061_16439326_16439415_16439659_16439704_16440184_16440254_16441073_16441131_16441367
H1_mix_00040472	chr17	+	973	5	FSM	ENSG00000175061.19	ENST00000477249.7	973	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	1369.39137940912	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	0	True	NA	-16	True	AATAAA	-30	NA	16439036	16442028	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16439061_16439326_16439415_16440110_16440254_16441073_16441131_16441367
H1_mix_00040474	chr17	+	688	5	FSM	ENSG00000175061.19	ENST00000483588.2	688	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1385.20781383156	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGGAGGGCCTGGGTGT	8	True	NA	16	True	AAAAAG	-15	NA	16439326	16463986	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16439415_16440184_16440254_16462832_16462942_16463163_16463318_16463718
H1_mix_00040475	chr17	+	1045	5	FSM	ENSG00000188933.16	ENST00000445583.6	1370	5	279	46	279	-46	multi-exon	FALSE	canonical	2	2	junction_4	4.32290411644765	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACCCAAACTGCAAGTG	NA	False	NA	NA	False	NA	NA	NA	16788037	16801080	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_16788136_16796042_16796235_16798241_16798531_16799950_16800372_16801035
H1_mix_00040476	chr17	+	926	4	FSM	ENSG00000133030.22	ENST00000395807.2	926	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	56.5822901229312	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTCTGGCCAGGCATGG	10	False	NA	NA	False	AATAAA	-19	NA	17042759	17097337	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_17042972_17075709_17075788_17078010_17078077_17096767
H1_mix_00040478	chr17	+	1391	4	FSM	ENSG00000141034.10	ENST00000376345.3	1391	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	60.7965642304088	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGACTTAATATCTCTG	24	True	NA	NA	False	AATAAA	-20	NA	18039444	18057467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18039903_18045146_18045207_18054126_18054235_18056702
H1_mix_00040481	chr17	+	8311	2	FSM	ENSG00000176994.11	ENST00000406438.5	8297	2	-14	0	-14	0	multi-exon	FALSE	canonical	2	7	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGGCTTCCTGATTACG	-13	True	NA	9	True	AATAAA	-19	NA	18315278	18328056	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_18318150_18322616
H1_mix_00040483	chr17	+	2704	12	NNC	ENSG00000108448.23	novel	1703	10	NA	NA	11	0	intron_retention	FALSE	canonical	2	4	junction_6	4.84981042485423	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTATGTGCCAGATACC	17	False	NA	9	True	AATAAA	-16	NA	18698020	18736112	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_18698115_18699153_18699276_18699359_18699458_18701356_18701446_18704618_18704766_18705062_18705165_18720101_18720326_18722236_18722333_18727524_18727759_18731069_18731236_18732038_18732135_18734876
H1_mix_00040486	chr17	+	699	1	FSM	ENSG00000263934.5	ENST00000584923.1	699	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCAGGCTGGTCTCCAA	3	False	NA	NA	False	NA	NA	NA	19188015	19188714	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_19188000_19188700
H1_mix_00040487	chr17	+	3646	7	NIC	ENSG00000072134.16	novel	4664	10	NA	NA	-34	0	intron_retention	FALSE	canonical	3	15	junction_1	73.4470708893297	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGGTTTCTGGCTGTGTCC	NA	False	NA	17	True	TATAAA	-25	NA	19237331	19336715	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_19237532_19309884_19309998_19312051_19312145_19328710_19328888_19329560_19329648_19331852_19332069_19333955
H1_mix_00040490	chr17	+	3187	14	FSM	ENSG00000128482.16	ENST00000461366.2	3174	14	-13	0	-13	0	multi-exon	FALSE	canonical	0	0	junction_7	1.27794213275663	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGCTTCCCAGTATATT	17	False	NA	6	True	AATAAA	-16	NA	19411218	19417276	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_19411463_19411629_19411671_19412497_19412784_19412937_19413145_19413279_19413412_19413576_19413682_19414094_19414146_19414448_19414506_19414585_19414661_19414769_19414888_19415037_19415208_19415285_19415340_19415517_19415593_19415704
H1_mix_00040491	chr17	+	3782	9	FSM	ENSG00000072210.19	ENST00000631291.2	3822	9	40	0	40	0	multi-exon	FALSE	canonical	3	5	junction_7	114.945571358796	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATAGATGGTATTTGTCA	NA	False	NA	19	True	TATAAA	-16	NA	19648565	19677590	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19671720_19671957_19675557
H1_mix_00040493	chr17	+	5193	8	FSM	ENSG00000128487.19	ENST00000676570.1	5482	8	289	0	-166	0	multi-exon	FALSE	canonical	1	5	junction_1	82.4247337556748	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTATATTCTTTTCAGT	NA	False	NA	-7	True	AATAAA	-4	NA	20009153	20239409	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_20009425_20096630_20096799_20110426_20110563_20204332_20205913_20227412_20227621_20231757_20231832_20232199_20232406_20236859
H1_mix_00040494	chr17	+	3995	14	FSM	ENSG00000128487.19	ENST00000678019.1	4284	14	289	0	-166	0	multi-exon	FALSE	canonical	1	2	junction_13	75.7124738614771	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCCAGACCCTGTCTCAA	NA	False	NA	NA	False	NA	NA	NA	20009153	20314621	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_20009425_20096630_20096799_20110426_20110563_20204332_20205913_20227412_20227621_20231757_20231832_20232199_20232406_20245925_20246072_20247218_20247320_20253504_20253587_20257450_20257608_20260191_20260295_20296960_20297078_20313975
H1_mix_00040496	chr17	+	267	1	FSM	ENSG00000189423.13	ENST00000645543.1	1192	1	328	597	-174	-597	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGTGGAATGCACCACAC	NA	False	NA	NA	False	NA	NA	NA	20416424	20416691	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_20416400_20416700
H1_mix_00040497	chr17	+	1171	5	FSM	ENSG00000189423.13	ENST00000413270.2	1174	5	3	0	3	0	multi-exon	FALSE	canonical	1	1	junction_1	3.57071421427143	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTACCACTCTGGCTG	NA	False	NA	NA	False	AAAAAG	-16	NA	20424591	20431008	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_20424784_20426790_20427080_20428511_20428938_20429608_20429702_20430837
H1_mix_00040498	chr17	+	325	1	FSM	ENSG00000232889.2	ENST00000448505.2	178	1	-151	4	-151	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGAAAATTTTTTATGCT	6542	False	NA	NA	False	NA	NA	NA	20595379	20595704	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_20595400_20595700
H1_mix_00040499	chr17	+	284	1	FSM	ENSG00000235546.2	ENST00000452760.2	1342	1	225	833	225	-833	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCTGTCACAGCAAGTGC	NA	False	NA	NA	False	GGGGCT	-36	NA	20612891	20613175	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_20612900_20613200
H1_mix_00040500	chr17	+	1165	1	FSM	ENSG00000264215.1	ENST00000578585.1	1514	1	-19	368	-19	-368	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCTTTTTAGAAAGCATT	2544	False	NA	NA	False	NA	NA	NA	20788051	20789216	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_20788100_20789200
H1_mix_00040501	chr17	+	1260	7	NNC	ENSG00000109016.18	novel	1253	7	NA	NA	-3	-3	at_least_one_novel_splicesite	TRUE	canonical	3	13	junction_6	41.1285248404992	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAGAGTTGTAGTCTTCC	10	True	NA	22	True	AATAAA	-11	NA	21126943	21191415	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_21126992_21172017_21172197_21178232_21178343_21183593_21183811_21184370_21184464_21188710_21188856_21190947
H1_mix_00040502	chr17	+	1006	6	FSM	ENSG00000109016.18	ENST00000578426.5	998	6	-8	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	48.8900807935516	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACTGAAGAAACACATCT	13	False	NA	NA	False	NA	NA	NA	21126946	21191266	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_21126992_21172017_21172197_21183593_21183811_21184370_21184464_21188710_21188864_21190947
H1_mix_00040503	chr17	+	1249	1	FSM	ENSG00000256618.3	ENST00000540040.3	1249	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGCAGACCCCAGCAATT	4	True	NA	7	True	NA	NA	NA	22523414	22524663	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_22523400_22524700
H1_mix_00040504	chr17	+	7180	19	NIC	ENSG00000141068.15	novel	6026	21	NA	NA	-139	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	15.6489261257407	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTGGGGCTTGTCTTTG	146	False	NA	7	True	AATAAA	-13	NA	27456590	27626433	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_27456875_27550567_27550709_27577491_27577640_27582645_27583106_27588474_27588536_27590810_27590895_27592360_27592423_27592519_27592627_27597267_27597437_27601359_27601402_27603833_27603889_27604679_27604729_27605433_27605814_27607913_27608011_27609195_27609330_27610066_27610199_27611493_27611630_27617294_27617429_27621928
H1_mix_00040506	chr17	+	730	3	NNC	ENSG00000109084.14	novel	2463	3	NA	NA	0	82	intron_retention	TRUE	canonical	3	108	junction_1	472.5	27	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCCATTTTTTTTTTTTT	17	True	NA	104	True	NA	NA	NA	28319199	28326957	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_28319366_28325507_28325648_28326533
H1_mix_00040507	chr17	+	506	3	FSM	ENSG00000244045.13	ENST00000509083.2	635	3	128	1	128	-1	multi-exon	FALSE	canonical	3	231	junction_1	7.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGTTGTTGGCCTGCAT	1659	False	NA	NA	False	ATTAAA	-16	NA	28359314	28361107	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28359405_28360528_28360572_28360734
H1_mix_00040510	chr17	+	658	4	FSM	ENSG00000198242.14	ENST00000472628.1	639	4	-19	0	-19	0	multi-exon	FALSE	canonical	3	11726	junction_3	1471.09264003174	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGCCTGTCTGTCAATT	295	False	NA	58	True	AATATA	-26	NA	28720549	28723936	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28720891_28722722_28722900_28723570_28723641_28723866
H1_mix_00040511	chr17	+	789	6	FSM	ENSG00000076604.16	ENST00000586813.5	789	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	96.8194195396771	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGACAGCTGTAACACCGC	12	True	NA	NA	False	NA	NA	NA	28744035	28748603	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28744256_28747217_28747265_28747842_28747948_28748016_28748179_28748261_28748424_28748510
H1_mix_00040512	chr17	+	825	4	FSM	ENSG00000076604.16	ENST00000584944.5	825	4	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_2	15.3260852434302	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGAATAAGTGTGGTGC	2308	False	NA	NA	False	NA	NA	NA	28746742	28748297	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28747265_28747842_28747948_28748016_28748179_28748261
H1_mix_00040515	chr17	+	1524	5	FSM	ENSG00000132591.12	ENST00000471992.1	1508	5	-16	0	0	0	multi-exon	FALSE	canonical	3	494	junction_4	37.8450789403325	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTCTCCCCAGTCTTGG	3001	False	NA	-19	True	NA	NA	NA	28858021	28861009	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_28858487_28858575_28858825_28858963_28859114_28859202_28859284_28860430
H1_mix_00040516	chr17	+	595	6	FSM	ENSG00000126653.18	ENST00000584154.5	583	6	-12	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	196.302827284785	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAACTGCAAGAGAGAG	-13	True	NA	NA	False	GATAAA	-27	NA	30116806	30179235	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_30116864_30118079_30118174_30168813_30168926_30172541_30172599_30178070_30178200_30179089
H1_mix_00040517	chr17	+	930	8	NIC	ENSG00000108587.16	novel	5987	9	NA	NA	0	6	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	168.414333579722	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGGTTTTCAGT	25	False	NA	NA	False	ATTAAA	-4	NA	30477441	30522599	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_30477465_30481142_30481258_30484213_30484302_30484662_30484771_30490125_30490218_30492678_30492754_30519938_30520022_30522253
H1_mix_00040518	chr17	+	1677	7	NIC	ENSG00000214719.13	novel	1273	7	NA	NA	-500	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_1	43.9750560608575	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTAAGAAGTTAAGTTG	-11	True	NA	NA	False	AATAAA	-22	NA	30600391	30634326	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_30600917_30607551_30607666_30608429_30608563_30610888_30610943_30631754_30631980_30633097_30633391_30633993
H1_mix_00040519	chr17	+	3939	3	ISM	ENSG00000214719.13	ENST00000398849.6	1411	9	55247	-3143	-14406	2000	3prime_fragment	FALSE	canonical	3	19	junction_1	61.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAATGGTAATAAATTGGT	NA	False	NA	94	True	AATAAA	-22	NA	30631754	30637466	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_30631928_30633097_30633391_30633993
H1_mix_00040520	chr17	+	1656	9	NNC	ENSG00000264538.7	novel	1560	7	NA	NA	-267	0	intron_retention	FALSE	canonical	3	15	junction_4	146.91813196471	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATTGCCTTTGTTTCTT	19	True	NA	14	True	AATATA	-18	NA	30709031	30770050	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_30709812_30734896_30734944_30735032_30735098_30742849_30743000_30743300_30743370_30759490_30759540_30766502_30766589_30768833_30769065_30769871
H1_mix_00040521	chr17	+	781	9	NIC	ENSG00000264538.7	novel	1560	7	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_7	113.369969568665	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATTGCCTTTGTTTCTT	-5	True	NA	14	True	AATATA	-18	NA	30709623	30770050	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_30709812_30734896_30734944_30735032_30735098_30743300_30743370_30759490_30759540_30766502_30766589_30768833_30768868_30769000_30769065_30769871
H1_mix_00040522	chr17	+	271	1	FSM	ENSG00000242439.1	ENST00000490847.1	418	1	-72	219	-72	-219	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAAGAGAGAGGTATCTCC	NA	False	NA	NA	False	GATAAA	-19	NA	30830828	30831099	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_30830800_30831100
H1_mix_00040523	chr17	+	348	2	FSM	ENSG00000184060.11	ENST00000480980.1	804	2	269	187	255	99	multi-exon	FALSE	canonical	1	1	junction_1	0	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGCTTTGATACCACAAAA	77	False	NA	NA	False	NA	NA	NA	30954508	30956541	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_30954556_30956240
H1_mix_00040524	chr17	+	583	3	FSM	ENSG00000184060.11	ENST00000470962.1	838	3	255	0	255	0	multi-exon	FALSE	canonical	1	1	junction_1	2	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTTTCTCACATCTGAA	77	False	NA	NA	False	NA	NA	NA	30954508	30958141	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_30954556_30956240_30956470_30957834
H1_mix_00040525	chr17	+	3156	1	FSM	ENSG00000264456.1	ENST00000580979.1	1661	1	579	-2074	579	2074	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAGGCTCAGAGGATCTT	1187	False	NA	NA	False	NA	NA	NA	30972230	30975386	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_30972200_30975400
H1_mix_00040526	chr17	+	568	1	FSM	ENSG00000264743.2	ENST00000578053.2	568	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATGATAAATACAAAAAGTC	4343	False	NA	NA	False	NA	NA	NA	30975386	30975954	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_30975400_30976000
H1_mix_00040530	chr17	+	1939	11	NIC	ENSG00000185158.12	novel	3091	15	NA	NA	-477	-3	combination_of_known_splicesites	FALSE	canonical	2	2	junction_7	33.1495098002972	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATTTTTAATGGTAATAA	7	True	NA	3	True	AATAAA	-16	NA	32007394	32053483	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_32008133_32024710_32024783_32027768_32027841_32030655_32030728_32031377_32031459_32034909_32034982_32035564_32035640_32047760_32047902_32049101_32049395_32050002_32050108_32053265
H1_mix_00040532	chr17	+	1190	9	NIC	ENSG00000185158.12	novel	3091	15	NA	NA	4	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	37.3210312692455	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTTTAATGGTAATAAAT	652	False	NA	5	True	AATAAA	-18	NA	32008039	32053485	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_32008133_32024710_32024783_32034909_32034982_32035564_32035640_32045699_32045819_32047760_32047902_32049101_32049395_32050002_32050108_32053265
H1_mix_00040535	chr17	+	5133	1	FSM	ENSG00000266777.1	ENST00000579186.1	1945	1	-2775	-413	-1865	413	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGTTTAAAATCAAAAGCT	1102	False	NA	NA	False	AAAAAG	-3	NA	32038108	32043241	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_32038100_32043200
H1_mix_00040536	chr17	+	663	4	NNC	ENSG00000264164.1	novel	431	3	NA	NA	-117	14000	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	47.5417944783558	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCCTTTCTCCTTTTCTA	NA	False	NA	NA	False	NA	NA	NA	32083061	32111065	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_32083323_32095061_32095202_32096842_32097067_32111027
H1_mix_00040537	chr17	+	2919	19	FSM	ENSG00000126858.19	ENST00000354266.7	2919	19	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	84.4801094275386	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATTTTTTCCATCATCAG	13	False	NA	24	True	AATAAA	-29	NA	32142559	32225666	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_32142730_32171046_32171102_32173830_32173913_32175318_32175363_32175961_32176016_32176160_32176214_32182756_32182866_32183170_32183273_32192200_32192300_32193135_32193245_32193986_32194108_32198946_32199032_32199404_32199551_32200955_32201057_32202769_32202901_32203889_32203974_32206909_32207030_32208106_32208310_32224615
H1_mix_00040538	chr17	+	2859	21	NIC	ENSG00000126858.19	novel	3297	21	NA	NA	3	-46	combination_of_known_junctions	TRUE	canonical	3	11	junction_18	119.737828191428	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATGTTTTTAGTTTAAAT	16	False	NA	12	True	AATAAA	-19	NA	32142562	32225457	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_32142730_32171042_32171102_32173830_32173913_32175318_32175363_32175961_32176016_32176160_32176214_32182756_32182866_32183170_32183273_32192200_32192300_32193135_32193245_32193986_32194108_32198946_32199032_32199404_32199551_32200955_32201057_32202769_32202901_32203889_32203974_32206909_32207030_32207511_32207564_32208106_32208310_32209349_32209446_32224615
H1_mix_00040539	chr17	+	3228	21	NIC	ENSG00000126858.19	novel	3289	21	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_3	121.306996912791	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTTCTTTTGTCATC	16	False	NA	10	True	AATAAA	-20	NA	32142562	32225727	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_32142730_32171042_32171102_32172936_32173061_32173830_32173913_32175318_32175363_32175961_32176016_32176160_32176214_32182756_32182866_32183170_32183273_32192200_32192300_32193135_32193245_32193986_32194108_32198946_32199032_32199404_32199551_32200955_32201057_32202769_32202901_32203889_32203974_32206909_32207030_32208106_32208310_32211115_32211239_32224615
H1_mix_00040540	chr17	+	2922	18	NIC	ENSG00000126858.19	novel	3165	20	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	85.6011512389034	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTTCTTTTGTCATC	16	False	NA	10	True	AATAAA	-20	NA	32142562	32225727	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_32142730_32173830_32173913_32175318_32175363_32175961_32176016_32176160_32176214_32182756_32182866_32183170_32183273_32192200_32192300_32193135_32193245_32193986_32194108_32198946_32199032_32199404_32199551_32200955_32201057_32202769_32202901_32203889_32203974_32206909_32207030_32208106_32208310_32224615
H1_mix_00040544	chr17	+	1286	1	FSM	ENSG00000264643.1	ENST00000577546.1	307	1	9	-988	9	988	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATCTCTAGTGTCGTCT	NA	False	NA	NA	False	NA	NA	NA	33680585	33681871	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_33680600_33681900
H1_mix_00040545	chr17	+	426	2	Antisense	novelGene_ENSG00000261156.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTCATCAAATATAAAAA	NA	False	NA	NA	False	NA	NA	NA	34183606	34185186	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr17_+_34183770_34184923
H1_mix_00040547	chr17	+	2119	1	FSM	ENSG00000270647.7	ENST00000604434.1	2103	1	-16	0	-16	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATGCCATTAATAATTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	35809465	35811584	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_35809500_35811600
H1_mix_00040549	chr17	+	789	6	Intergenic	novelGene_553	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	4.02988833592198	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTGTCTGTTGATCTG	NA	False	NA	11	True	AATATA	-18	NA	36657689	36748865	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_36657723_36683484_36683660_36733137_36733444_36735058_36735163_36743119_36743173_36748747
H1_mix_00040550	chr17	+	3730	5	NIC	ENSG00000273706.5	novel	3425	5	NA	NA	-163	0	intron_retention	FALSE	canonical	3	5	junction_1	26.892145693492	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAATTGGTGTGTTATTTG	357	False	NA	20	True	AATAAA	-40	NA	36937146	36944612	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_36938368_36940312_36940517_36940609_36940888_36942199_36942366_36942751
H1_mix_00040551	chr17	+	1714	9	FSM	ENSG00000275700.6	ENST00000680807.1	4050	9	-55	2391	-55	0	multi-exon	FALSE	canonical	3	728	junction_2	53.1987723072629	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGGAAGGTAATTTAGATA	6663	False	NA	NA	False	NA	NA	NA	36948869	37019064	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_36949217_36950213_36950406_36952885_36953297_36953769_36953908_36986616_36986732_36988518_36988721_36989246_36989412_36990773_36990858_37019004
H1_mix_00040552	chr17	+	2721	11	FSM	ENSG00000275700.6	ENST00000679881.1	2712	11	-9	0	-4	0	multi-exon	FALSE	canonical	3	728	junction_1	58.634119759744	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACCGCCACCACCGCTT	301	False	NA	7	True	AATAAA	-7	NA	36949280	37056860	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_36950406_36952885_36953297_36953769_36953908_36986616_36986732_36988518_36988721_36989246_36989412_36990773_36990858_37019004_37019073_37020933_37021015_37031613_37031686_37056600
H1_mix_00040554	chr17	+	974	1	FSM	ENSG00000276810.1	ENST00000620102.1	524	1	-421	-29	-421	29	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATTAACTCAAAAATGTC	NA	False	NA	NA	False	NA	NA	NA	37162194	37163168	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_37162200_37163200
H1_mix_00040555	chr17	+	528	6	ISM	ENSG00000274419.6	ENST00000616101.4	2116	14	6068	1858	6068	-1858	internal_fragment	TRUE	canonical	3	5	junction_4	14.7729482500955	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCTGCCACCCCCAGGTG	NA	False	NA	NA	False	AAGAAA	-18	NA	38010043	38013044	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_38010054_38010596_38010718_38011430_38011526_38011909_38011976_38012438_38012539_38012908
H1_mix_00040557	chr17	+	480	5	FSM	ENSG00000274211.6	ENST00000617765.1	480	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	11.2555541844904	3240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTTTGAGGACCGCTGTC	892	False	NA	NA	False	NA	NA	NA	38352942	38377738	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_38353033_38361710_38361776_38366286_38366418_38367881_38368051_38377713
H1_mix_00040558	chr17	+	6875	7	ISM	ENSG00000274211.6	ENST00000665913.1	7978	10	13208	0	12389	0	3prime_fragment	FALSE	canonical	1	1	junction_1	9.00771274458111	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATGTTCTTTGGTTTGG	527	False	NA	14	True	AATAAA	-16	NA	38365331	38405593	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_38365410_38366286_38366418_38367881_38368051_38377713_38377843_38395308_38395445_38395847_38395999_38399512
H1_mix_00040559	chr17	+	4104	24	NNC	ENSG00000275832.5	novel	769	8	NA	NA	11	-2927	at_least_one_novel_splicesite	TRUE	canonical	3	17	junction_1	50.5155649897948	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGGTGTATGCCTGTA	17	False	NA	NA	False	AATACA	-14	NA	38419290	38507133	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_38419400_38458101_38458264_38460904_38460933_38462845_38462942_38463117_38463197_38463327_38463383_38466166_38467332_38469143_38469300_38469523_38469636_38469846_38469905_38471862_38472007_38477827_38477897_38479435_38479498_38479752_38479884_38482021_38482144_38482522_38482679_38486061_38486141_38490101_38490176_38490461_38490552_38491406_38491533_38497784_38497827_38498413_38498511_38500596_38500629_38506273
H1_mix_00040560	chr17	+	5795	23	NIC	ENSG00000275832.5	novel	5911	24	NA	NA	-3	0	intron_retention	FALSE	canonical	3	30	junction_21	43.1073280955476	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGAGTCAGCTGTCTCA	14	False	NA	28	True	AATAAA	-14	NA	38428482	38512385	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_38428549_38458101_38458264_38460904_38460933_38462845_38462942_38463117_38463197_38463327_38463383_38466166_38467332_38469143_38469300_38469523_38469636_38469846_38469905_38471862_38472007_38477578_38477897_38479435_38479498_38479752_38479884_38482021_38482144_38482522_38482679_38486061_38486141_38490101_38490176_38490461_38490552_38491406_38491533_38497784_38497827_38500596_38500629_38509943
H1_mix_00040561	chr17	+	3823	24	NNC	ENSG00000275832.5	novel	769	8	NA	NA	-16	-3566	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_23	47.5138025911731	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAAATTGATTTTCTCAC	0	True	NA	16	True	AATAAA	-26	NA	38453673	38506494	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_38454141_38458101_38458264_38460904_38460933_38462845_38462942_38463117_38463197_38463327_38463383_38466166_38467332_38469143_38469300_38469523_38469636_38469846_38469905_38471862_38472007_38477827_38477897_38479435_38479498_38479752_38479884_38482021_38482144_38482522_38482679_38486061_38486141_38490101_38490176_38490461_38490552_38491406_38491533_38497784_38497827_38498413_38498511_38500596_38500629_38506273
H1_mix_00040562	chr17	+	6293	24	NIC	ENSG00000275832.5	novel	769	8	NA	NA	-16	0	intron_retention	FALSE	canonical	3	53	junction_1	34.2094626469574	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGAGTCAGCTGTCTCA	0	True	NA	28	True	AATAAA	-14	NA	38453673	38512385	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_38454141_38458101_38458264_38460904_38460933_38462845_38462942_38463117_38463197_38463327_38463383_38466166_38467332_38469143_38469300_38469523_38469636_38469846_38469905_38471862_38472007_38477578_38477897_38479435_38479498_38479752_38479884_38482021_38482144_38482522_38482679_38486061_38486141_38490101_38490176_38490461_38490552_38491406_38491533_38497784_38497827_38498413_38498511_38500596_38500629_38509943
H1_mix_00040563	chr17	+	6606	12	ISM	ENSG00000275023.5	ENST00000621332.5	7839	20	10393	0	-1758	0	3prime_fragment	FALSE	canonical	2	3	junction_1	2.97926720148617	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGAAGAGCCCCTGCGTAG	NA	False	NA	NA	False	AATAAA	-30	NA	38715665	38729795	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_38715829_38716366_38716982_38717431_38717614_38717844_38717954_38719516_38719584_38719749_38719896_38720371_38720570_38720658_38720748_38721877_38722228_38722677_38722769_38724619_38724977_38725556
H1_mix_00040564	chr17	+	6071	8	FSM	ENSG00000275023.5	ENST00000619356.1	3868	8	400	-2603	400	0	multi-exon	FALSE	canonical	2	7	junction_4	2.39045721866879	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGAAGAGCCCCTGCGTAG	1445	False	NA	NA	False	AATAAA	-30	NA	38718982	38729795	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_38719584_38719749_38719896_38720371_38720570_38720658_38720748_38721877_38722228_38722677_38722769_38724619_38724977_38725556
H1_mix_00040567	chr17	+	906	2	FSM	ENSG00000266469.2	ENST00000582842.1	860	2	-46	0	-46	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTACTTCAAAAGTGAGCT	NA	False	NA	NA	False	NA	NA	NA	39401746	39406233	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39401899_39405479
H1_mix_00040568	chr17	+	270	2	FSM	ENSG00000167258.15	ENST00000581963.1	436	2	166	0	166	0	multi-exon	FALSE	canonical	3	8	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCCTTCATCCCCAATGC	NA	False	NA	NA	False	NA	NA	NA	39544156	39546682	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_39544361_39546616
H1_mix_00040572	chr17	+	3617	27	NNC	ENSG00000141736.14	novel	4557	27	NA	NA	0	-331	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_21	326.397525533752	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCAGCCCCCTTCGCCCC	2	True	NA	NA	False	NA	NA	NA	39700063	39727713	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_39700312_39706989_39707142_39708320_39708535_39709317_39709453_39709812_39709882_39710085_39710202_39710339_39710482_39711927_39712048_39712321_39712449_39715285_39715360_39715445_39715537_39715739_39715940_39716300_39716434_39716514_39716606_39717319_39717481_39719786_39719835_39723318_39723458_39723537_39723661_39723911_39724011_39724725_39724912_39725048_39725210_39725326_39725403_39725706_39725854_39726561_39726660_39726814_39727004_39727294_39727548_39727688
H1_mix_00040574	chr17	+	2139	14	NIC	ENSG00000141738.14	novel	2233	15	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_12	50.820370513915	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGAGTTCTGTCTGGCA	6	True	NA	24	True	AATAAA	-18	NA	39737943	39747285	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_39738134_39742251_39742457_39742565_39742717_39742897_39743055_39743179_39743302_39743392_39743471_39744069_39744208_39744552_39744664_39744885_39744985_39745242_39745324_39745421_39745539_39745727_39745789_39746108_39746203_39746750
H1_mix_00040575	chr17	+	3698	16	NIC	ENSG00000108352.13	novel	4243	15	NA	NA	-134	0	combination_of_known_splicesites	FALSE	non_canonical	1	1	junction_1	19.6416790411501	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGTTGTTCTCCATT	4872	False	NA	14	True	GATAAA	-14	NA	40176875	40195650	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_40177123_40178261_40178382_40181615_40181695_40184213_40184350_40184580_40184679_40188865_40188979_40189207_40189376_40190433_40190532_40190639_40190763_40191315_40191495_40191581_40191673_40192212_40192264_40192605_40192694_40192925_40192991_40193362_40193418_40193663
H1_mix_00040583	chr17	+	1527	10	FSM	ENSG00000131462.9	ENST00000589688.2	1509	10	-18	0	0	0	multi-exon	FALSE	canonical	1	82	junction_4	454.48736553627	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATATAAATCAAGTCACTG	-16	True	NA	2	True	AATAAA	-6	NA	42609670	42615225	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42609787_42610107_42610221_42610422_42610591_42612074_42612144_42612946_42613074_42613646_42613734_42613848_42613999_42614259_42614413_42614495_42614658_42614843
H1_mix_00040585	chr17	+	712	5	FSM	ENSG00000131475.7	ENST00000590339.5	668	5	-44	0	-13	0	multi-exon	FALSE	canonical	3	1101	junction_2	48.0540060764969	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCAGGAGCACAAGGCCGA	NA	False	NA	NA	False	NA	NA	NA	42773435	42779006	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_42773879_42774645_42774700_42775380_42775470_42776244_42776321_42778956
H1_mix_00040589	chr17	+	3986	5	NNC	ENSG00000108830.10	novel	4162	5	NA	NA	253	-3	at_least_one_novel_splicesite	TRUE	canonical	3	141	junction_1	390.596578966073	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGCTGCCAGAGTTTCT	221	False	NA	9	True	AATAAA	-16	NA	43025493	43032038	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_43025540_43025959_43026048_43027182_43027293_43028060_43028196_43028431
H1_mix_00040591	chr17	+	4656	21	FSM	ENSG00000188554.15	ENST00000341165.10	4656	21	0	0	0	0	multi-exon	TRUE	canonical	1	6	junction_1	47.5210216641015	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGACTGGCTAGTCCTTGC	-34	True	NA	29	True	AATAAA	-20	NA	43170480	43211689	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_43170612_43175790_43175902_43177935_43177999_43179393_43179413_43180794_43180818_43186249_43186445_43189041_43189120_43189587_43189803_43190608_43190777_43191371_43191582_43193093_43193254_43193347_43193639_43194349_43194500_43194963_43195040_43196480_43196592_43196941_43197107_43200166_43200609_43201685_43201781_43202654_43202713_43203680_43203787_43209900
H1_mix_00040593	chr17	+	3026	4	NNC	ENSG00000175906.5	novel	1578	2	NA	NA	8	7483	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	352.007891325685	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCAGTTGTTTCTTTTTAA	8	False	NA	NA	False	AATAAA	-15	NA	43399000	43408620	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_43399094_43399660_43401322_43402583_43402707_43407471
H1_mix_00040596	chr17	+	2575	10	NNC	ENSG00000125319.15	novel	2698	10	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_3	33.9752996698237	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTCCCTTTCTTTT	14	True	NA	14	True	AATAAA	-14	NA	44142049	44162476	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_44142146_44145202_44145254_44147857_44149028_44150963_44151045_44152636_44152778_44154555_44154665_44154852_44154939_44155285_44155412_44157832_44157942_44161870
H1_mix_00040598	chr17	+	2266	3	ISM	ENSG00000168591.16	ENST00000587989.1	1969	4	222	-12	-1	0	3prime_fragment	FALSE	canonical	3	18	junction_1	48	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGCCTCTTTCTGTGAC	36	True	NA	11	True	AATAAA	-17	NA	44187270	44191726	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_44187744_44189021_44189589_44190500
H1_mix_00040599	chr17	+	1674	11	FSM	ENSG00000108309.14	ENST00000590941.5	1675	11	1	0	1	0	multi-exon	TRUE	canonical	1	1	junction_2	4.83838816136118	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTGTCTCCCCCAC	-17	True	NA	NA	False	NA	NA	NA	44308583	44317726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_44308940_44312579_44312696_44313118_44313253_44313417_44313504_44314734_44314825_44314928_44315010_44315154_44315321_44315451_44315610_44316384_44316523_44316618_44316726_44317484
H1_mix_00040603	chr17	+	4939	13	FSM	ENSG00000136448.13	ENST00000678332.1	4918	13	-21	0	-2	0	multi-exon	FALSE	canonical	0	0	junction_1	238.804138713437	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAATAAAGAAAGCAGCTG	-16	True	NA	NA	False	AATACA	-12	NA	45061298	45108989	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_45061461_45078082_45078150_45081643_45081753_45086507_45086653_45093684_45093804_45096193_45096286_45097127_45097245_45098381_45098553_45099404_45099514_45102950_45103122_45103708_45103877_45104858_45104997_45105618
H1_mix_00040613	chr17	+	3694	1	FSM	ENSG00000204650.14	ENST00000589868.1	2546	1	-1148	0	-1148	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAGTAAAAAATATAAT	NA	False	NA	NA	False	NA	NA	NA	45644522	45648216	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_45644500_45648200
H1_mix_00040621	chr17	+	3818	5	FSM	ENSG00000108433.17	ENST00000638892.1	3808	5	-10	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	143.398919103318	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCTTAGTCCAAAAAAGATT	-18	True	NA	8	True	AATAAA	-20	NA	46923127	46942019	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_46923222_46929523_46929585_46931098_46931208_46932066_46932200_46938598
H1_mix_00040622	chr17	+	3405	4	FSM	ENSG00000108433.17	ENST00000640495.1	3395	4	-10	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	115.854314646552	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTGGCTAATTTTTTTT	7	True	NA	NA	False	NA	NA	NA	46923152	46941728	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_46923222_46929519_46929585_46935028_46935170_46938598
H1_mix_00040623	chr17	+	1278	9	FSM	ENSG00000108433.17	ENST00000638579.1	1273	9	-5	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	131.180219545479	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTACTTAAGCTGGTTTGC	7	True	NA	NA	False	AATAAA	-7	NA	46923152	46952820	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_46923222_46929519_46929585_46931098_46931208_46932066_46932200_46935028_46935170_46938598_46938705_46948565_46948658_46948942_46949348_46952662
H1_mix_00040625	chr17	+	1743	12	FSM	ENSG00000141279.17	ENST00000532729.6	1749	12	0	6	0	-4	multi-exon	FALSE	canonical	3	465	junction_7	86.6511959067278	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAAGCTGTGTTCAGGTT	1	True	NA	NA	False	AATAAA	-14	NA	47531107	47592669	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_47531556_47545908_47545994_47569416_47569495_47579389_47579512_47582741_47582850_47585499_47585701_47586147_47586245_47586364_47586399_47587229_47587345_47590716_47590882_47591955_47592061_47592484
H1_mix_00040628	chr17	+	323	2	FSM	ENSG00000108465.15	ENST00000577802.1	415	2	0	92	0	-92	multi-exon	FALSE	canonical	3	563	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCCACGTGTCTAGAAACA	5488	False	NA	NA	False	NA	NA	NA	47976627	47977959	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_47976823_47977831
H1_mix_00040629	chr17	+	4138	5	NIC	ENSG00000082641.16	novel	2172	4	NA	NA	-15	0	intron_retention	FALSE	canonical	3	43	junction_1	108.315511354561	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTAAGTGCACTTTTTC	87	False	NA	-9	True	AATAAA	-17	NA	48054659	48061479	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_48055151_48056385_48056599_48057031_48057122_48057343_48057503_48058294
H1_mix_00040637	chr17	+	1478	4	NIC	ENSG00000159199.14	novel	598	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	1899	junction_1	408.751214745052	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCCCTGTCTGTGCCTCT	6	True	NA	35	True	ATTAAA	-15	NA	48892796	48895868	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_48892841_48893408_48894450_48895155_48895335_48895654
H1_mix_00040638	chr17	+	555	4	NIC	ENSG00000159199.14	novel	646	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_2	1090.87498010644	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCCCTGTCTGTGCCTCT	6	True	NA	35	True	ATTAAA	-15	NA	48892796	48895868	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_48892911_48893408_48893457_48895155_48895335_48895654
H1_mix_00040639	chr17	+	488	4	FSM	ENSG00000159199.14	ENST00000506855.1	468	4	-20	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	1044.73962731816	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGTCTGTGCCTCTGTC	6	True	NA	38	True	ATTAAA	-18	NA	48892796	48895871	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_48892841_48893408_48893457_48895155_48895335_48895654
H1_mix_00040640	chr17	+	539	5	FSM	ENSG00000159199.14	ENST00000503641.5	539	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	1071.53006840686	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGTCTGTGCCTCTGTC	6	True	NA	38	True	ATTAAA	-18	NA	48892796	48895871	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_48892841_48893408_48893457_48894371_48894450_48895182_48895335_48895654
H1_mix_00040654	chr17	+	2784	18	NIC	ENSG00000006282.21	novel	2734	17	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_3	34.039667476897	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGAGGGCCTCAGCTTT	16	True	NA	9	True	AATAAA	-20	NA	50547195	50555850	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_50547286_50547664_50547768_50548042_50548162_50548282_50548454_50548553_50548619_50548809_50548965_50549042_50549187_50549285_50549488_50549984_50550116_50550207_50550313_50550535_50550611_50550707_50550918_50550997_50551191_50551510_50551680_50551968_50552181_50554250_50554451_50555231_50555313_50555491
H1_mix_00040656	chr17	+	2132	12	NIC	ENSG00000108848.16	novel	1972	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	64	junction_9	259.607077543629	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTTAGCCTTTGGATTT	-10	True	NA	-30	True	NA	NA	NA	50719602	50752585	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651_50744814_50745719_50746004_50746541_50746703_50749218_50749345_50750500_50750853_50752199
H1_mix_00040657	chr17	+	2081	13	NNC	ENSG00000108848.16	novel	1972	11	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_8	265.709375487999	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAGTCCCCTGTTTTAAA	-3	True	NA	23	True	AATAAA	-14	NA	50719609	50752709	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651_50744814_50745719_50746004_50746544_50746703_50750500_50750642_50750746_50750853_50751296_50751363_50752199
H1_mix_00040659	chr17	+	1193	9	FSM	ENSG00000011052.21	ENST00000555572.1	1193	9	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_5	2798.82983360904	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACTGTCTCCTTGTGCTT	41	True	NA	24	True	AATAAA	-15	NA	51153635	51171742	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_51153663_51154224_51154445_51155650_51155781_51159979_51160082_51161159_51161273_51166826_51166957_51168241_51168344_51169936_51170050_51171486
H1_mix_00040667	chr17	+	1193	9	NIC	ENSG00000108384.15	novel	2562	9	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	22.9506944339382	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATCCAGATCATATGAAG	-18	True	NA	6	True	AATAAA	-17	NA	58692583	58734327	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_58692686_58694930_58695190_58696692_58696860_58703195_58703330_58709858_58709991_58720745_58720813_58724039_58724101_58732483_58732545_58734117
H1_mix_00040673	chr17	+	4685	1	FSM	ENSG00000141376.23	ENST00000588720.1	4556	1	-129	0	-129	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGAGTTGCTGGGGTAA	4754	False	NA	13	True	AATAAA	-22	NA	61388146	61392831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_61388100_61392800
H1_mix_00040676	chr17	+	3790	23	NIC	ENSG00000146872.19	novel	5405	23	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_2	90.4809006831262	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTCTTGGATTCTCTGA	NA	False	NA	24	True	AATAAA	-18	NA	62478825	62613489	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_62479291_62481123_62481207_62508407_62508554_62520772_62520845_62522203_62522274_62523133_62523178_62524235_62524332_62536169_62536338_62552301_62552398_62553662_62553756_62560015_62560127_62565000_62565138_62573214_62573368_62576708_62576776_62578476_62578575_62580110_62580193_62586134_62586227_62596584_62596675_62600650_62600821_62602041_62602181_62606129_62606242_62608040_62608149_62612391
H1_mix_00040677	chr17	+	3187	19	NIC	ENSG00000146872.19	novel	3512	23	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	78.3795962678496	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTCTTGGATTCTCTGAA	52	False	NA	25	True	AATAAA	-19	NA	62478998	62613490	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_62479291_62481123_62481207_62520772_62520845_62522203_62522274_62523133_62523178_62536169_62536338_62560015_62560127_62565000_62565138_62573214_62573368_62576708_62576776_62578476_62578575_62580110_62580193_62586134_62586227_62596584_62596675_62600650_62600821_62602041_62602181_62606129_62606242_62608040_62608149_62612391
H1_mix_00040682	chr17	+	8151	4	ISM	ENSG00000170921.16	ENST00000424789.6	11721	25	403929	-52	314	48	3prime_fragment	FALSE	canonical	3	15	junction_1	2.94392028877595	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCTTTTAAGCTTACCC	NA	False	NA	62	True	NA	NA	NA	63413484	63427751	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_63413635_63415527_63415675_63418306_63418408_63419998
H1_mix_00040689	chr17	+	1914	8	NIC	ENSG00000154217.16	novel	6182	10	NA	NA	17	-443	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	88.254502110981	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGTTGTTGTTTTTTT	-13	True	NA	36	True	TATAAA	-26	NA	67377297	67692924	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_67378203_67532801_67532951_67578185_67578258_67632142_67632239_67669507_67669664_67675478_67675543_67687065_67687185_67692571
H1_mix_00040694	chr17	+	11453	29	NIC	ENSG00000171634.19	novel	11036	31	NA	NA	-29	-2	combination_of_known_junctions	FALSE	canonical	3	62	junction_4	74.1853975812337	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGGTGCAGTTTCTAAT	418	False	NA	9	True	AATAAA	-19	NA	67826112	67984376	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_67826338_67853939_67854763_67866463_67866688_67874816_67875021_67891843_67892035_67893369_67893726_67894033_67894166_67903788_67903919_67904701_67904841_67909581_67909762_67910876_67913188_67918713_67918839_67920014_67920144_67922839_67922991_67924546_67924590_67928354_67928602_67929335_67929488_67931910_67932020_67940438_67940657_67944149_67944373_67945408_67946326_67947725_67947809_67948080_67948307_67959540_67959876_67963332_67963507_67964211_67964405_67966571_67966657_67975771_67975959_67981435
H1_mix_00040695	chr17	+	10471	31	NIC	ENSG00000171634.19	novel	10607	31	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_4	81.6426903579793	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTGTACGTAATAGGAC	17	False	NA	-50	True	AATAGA	-44	NA	67826141	67984317	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_67826338_67853939_67854763_67866463_67866688_67874816_67875021_67886127_67886317_67891843_67892035_67893369_67893726_67894033_67894166_67903788_67903919_67904701_67904841_67909581_67909762_67910876_67913188_67918713_67918839_67920014_67920144_67922839_67922991_67924546_67924590_67928354_67928602_67928958_67929121_67929335_67929488_67931910_67932020_67940438_67940657_67944149_67944373_67945408_67945897_67947725_67947809_67948080_67948307_67959540_67959876_67963332_67963507_67964211_67964405_67966571_67966657_67975771_67975959_67982251
H1_mix_00040696	chr17	+	8342	24	ISM	ENSG00000171634.19	ENST00000306378.11	11075	28	641	24003	2	-2	5prime_fragment	FALSE	canonical	3	62	junction_4	74.0297288671495	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTGTCAAAGTTTCCA	19	False	NA	14	True	ATTAAA	-14	NA	67826143	67960375	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_67826338_67853939_67854763_67866463_67866688_67874816_67875021_67891843_67892035_67893369_67893726_67894033_67894166_67903788_67903919_67904701_67904841_67909581_67909762_67910876_67913188_67918713_67918839_67920014_67920144_67922839_67922991_67924546_67924590_67928354_67928602_67929335_67929488_67931910_67932020_67940438_67940657_67944149_67944373_67945408_67946326_67947725_67947809_67948080_67948307_67959540
H1_mix_00040704	chr17	+	1489	8	FSM	ENSG00000196704.14	ENST00000612294.4	1498	8	9	0	9	0	multi-exon	FALSE	canonical	0	0	junction_1	270.410496716925	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTACTGGCCTGGTCTGT	286	False	NA	29	True	AATAAA	-26	NA	68248012	68257164	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_68248158_68248639_68248706_68250187_68250471_68250793_68250968_68251049_68251179_68254403_68254568_68255699_68255877_68256813
H1_mix_00040714	chr17	+	5023	32	NNC	ENSG00000177728.17	novel	5412	32	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	48.1514693009224	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAATACCTGTGGCTGGT	-3	True	NA	NA	False	ATTAAA	-15	NA	75456635	75500082	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_75456752_75471799_75471930_75485427_75485548_75485870_75485999_75486289_75486427_75487931_75488135_75488758_75488911_75489265_75489369_75489575_75489663_75490233_75490351_75490701_75490759_75491048_75491154_75491302_75491456_75491690_75491853_75492473_75492790_75492928_75493133_75493490_75493594_75493698_75493917_75494626_75494809_75494895_75495035_75495283_75495400_75495543_75495644_75495965_75496075_75496281_75496472_75496729_75496808_75497112_75497199_75497780_75497863_75498174_75498324_75498443_75498539_75498628_75498723_75498911_75499083_75499261
H1_mix_00040715	chr17	+	5030	32	NIC	ENSG00000177728.17	novel	5412	32	NA	NA	5	-2	combination_of_known_junctions	FALSE	canonical	2	49	junction_13	38.5250435461003	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGTGGCTGGTCTGTAA	26	False	NA	NA	False	ATTAAA	-21	NA	75456664	75500088	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_75456752_75471799_75471930_75485427_75485548_75485870_75485999_75486289_75486427_75487931_75488135_75488758_75488911_75489265_75489369_75489575_75489663_75490233_75490351_75490701_75490759_75491048_75491154_75491302_75491468_75491690_75491901_75492473_75492790_75492928_75493103_75493490_75493594_75493698_75493917_75494626_75494809_75494895_75495035_75495283_75495400_75495543_75495644_75495965_75496075_75496281_75496472_75496729_75496808_75497112_75497199_75497780_75497863_75498174_75498324_75498443_75498539_75498628_75498723_75498911_75499083_75499261
H1_mix_00040716	chr17	+	1613	11	NIC	ENSG00000182173.14	novel	1937	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	123.243011972282	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTGTTTCTGTATGTAC	0	True	NA	11	True	ATTAAA	-14	NA	75516547	75524733	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_75516617_75516745_75516911_75517008_75517073_75517160_75517245_75517556_75517656_75518994_75519048_75521408_75521511_75522006_75522334_75523274_75523336_75523662_75523780_75524261
H1_mix_00040728	chr17	+	1056	4	NIC	ENSG00000181038.14	novel	1059	6	NA	NA	0	0	intron_retention	FALSE	canonical	2	6	junction_3	83.0582125178881	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGGATTGTTCCTTAGT	-10	True	NA	NA	False	ATTAAA	-15	NA	76726842	76733878	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_76727214_76732977_76733216_76733292_76733382_76733520
H1_mix_00040729	chr17	+	1476	5	NNC	ENSG00000181038.14	novel	1184	5	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	78.873316146844	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGATTGTTCCTTAGTCA	-2	True	NA	NA	False	ATTAAA	-17	NA	76726850	76733880	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_76727535_76729689_76729795_76732977_76733216_76733292_76733382_76733520
H1_mix_00040730	chr17	+	1036	4	NIC	ENSG00000181038.14	novel	925	5	NA	NA	44	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	90.0419655247238	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGATTGTTCCTTAGTCA	17	False	NA	NA	False	ATTAAA	-17	NA	76727008	76733880	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_76727358_76732977_76733216_76733292_76733382_76733520
H1_mix_00040735	chr17	+	4998	19	NNC	ENSG00000129657.16	novel	2908	18	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_17	56.0298917135496	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTCTTTTTCTTATTGT	34	True	NA	NA	False	AATAAA	-21	NA	77141031	77217101	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_77141108_77142645_77142751_77143566_77143660_77190802_77190953_77191180_77191313_77193420_77193550_77194676_77194912_77196201_77196312_77200483_77200674_77203569_77203659_77205275_77205347_77206228_77206401_77206727_77206863_77209341_77209477_77211949_77212202_77213313_77213493_77213917_77215806_77215971_77215985_77216257
H1_mix_00040738	chr17	+	792	4	NNC	ENSG00000078687.17	novel	7093	23	NA	NA	-524	-43881	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	20.3960780543711	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGATTCCCTCTTTGCT	14	False	NA	0	True	AATAAA	-14	NA	77958715	78005468	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_+_77959269_78004169_78004270_78005057_78005080_78005351
H1_mix_00040739	chr17	+	9630	20	FSM	ENSG00000078687.17	ENST00000301624.8	9632	20	2	0	2	0	multi-exon	FALSE	canonical	1	2	junction_3	15.1876535364946	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGTGGTTTGTGTTTTT	886	False	NA	NA	False	ATTAAA	-31	NA	78005057	78108835	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_78005080_78031515_78031843_78048844_78051458_78064721_78064938_78067756_78067924_78071084_78071166_78073036_78073095_78075135_78075279_78077184_78077335_78079394_78079542_78083046_78083167_78086502_78086587_78086852_78087094_78091439_78091608_78092932_78093125_78093619_78093764_78098342_78098538_78102473_78102545_78103413_78103554_78104484
H1_mix_00040740	chr17	+	488	2	FSM	ENSG00000266970.2	ENST00000587575.1	490	2	2	0	2	0	multi-exon	FALSE	canonical	3	62	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATATTCATTCATGATG	2217	False	NA	-13	True	CATAAA	-7	NA	78362672	78364905	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_78362752_78364496
H1_mix_00040742	chr17	+	6564	9	ISM	ENSG00000087157.19	ENST00000262764.11	2297	10	13	105	0	0	intron_retention	FALSE	canonical	3	339	junction_4	42.6905654097015	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATATTGCCTTTAACCA	8	True	NA	4	True	AATATA	-18	NA	78378661	78424554	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_78378809_78392475_78392666_78396307_78396386_78398251_78398352_78399347_78399538_78400676_78400856_78403567_78404090_78414878_78415028_78419545
H1_mix_00040743	chr17	+	2240	9	NIC	ENSG00000087157.19	novel	2297	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_2	144.847710976045	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGGTTGTGTGGGAAAT	24	False	NA	14	True	AATAAA	-18	NA	78378677	78424659	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_78378809_78392475_78392666_78398251_78398352_78399347_78399538_78400676_78400856_78403567_78404090_78414878_78415028_78419545_78419726_78424060
H1_mix_00040749	chr17	+	3528	18	FSM	ENSG00000141519.15	ENST00000374877.7	3544	18	16	0	-4	0	multi-exon	FALSE	canonical	1	1	junction_17	15.208129314016	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGAAATTCCTCTGCTG	0	True	NA	NA	False	AATAAA	-28	NA	80036647	80090819	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_80036692_80038122_80038187_80039811_80040271_80047278_80047403_80048582_80048762_80049905_80049990_80050063_80050284_80058493_80058652_80058857_80058981_80065484_80065607_80081545_80081790_80081875_80082059_80084742_80084989_80086002_80086217_80087606_80087777_80088010_80088103_80089763_80089885_80090138
H1_mix_00040750	chr17	+	1939	9	ISM	ENSG00000141519.15	ENST00000269318.9	1970	11	16	8417	4	-7286	5prime_fragment	FALSE	canonical	3	30	junction_1	4.38748219369606	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACTTAAAAAAAAAAAAAAAA	20	False	NA	NA	False	NA	NA	NA	80036667	80059484	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_+_80036692_80038122_80038187_80039811_80040271_80047278_80047403_80048582_80048762_80049905_80049990_80050063_80050284_80058493_80058652_80058857
H1_mix_00040755	chr17	+	1237	9	NIC	ENSG00000173818.17	novel	908	9	NA	NA	6	-3	intron_retention	FALSE	canonical	0	0	junction_2	29.789889224366	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTCTTCTCAGGATTC	25	False	NA	22	True	AATAGA	-19	NA	80415492	80430338	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_80415822_80421827_80421963_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772_80429832_80430040
H1_mix_00040759	chr17	+	709	2	FSM	ENSG00000224877.4	ENST00000573173.1	709	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTTGAGGCGTGGGTAG	572	False	NA	-16	True	NA	NA	NA	81239913	81241169	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81240440_81240986
H1_mix_00040764	chr17	+	613	3	FSM	ENSG00000141552.18	ENST00000577425.5	603	3	-10	0	0	0	multi-exon	FALSE	canonical	3	307	junction_2	236.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGAGGCCTCTGGGTGC	47	False	NA	22	True	ATTAAA	-13	NA	81891712	81900253	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81891834_81894466_81894625_81899919
H1_mix_00040766	chr17	+	2136	1	FSM	ENSG00000141552.18	ENST00000573956.1	2136	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGGCCTCTGGGTGCCT	1288	False	NA	24	True	ATTAAA	-15	NA	81898119	81900255	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_+_81898100_81900300
H1_mix_00040772	chr17	-	1896	3	NNC	ENSG00000181031.16	novel	880	2	NA	NA	-271	41	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	30.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCACACACCTGATGCTG	NA	False	NA	NA	False	GGGGCT	-21	NA	216204	212347	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_213924_215653_215944_216174
H1_mix_00040773	chr17	-	2700	10	FSM	ENSG00000181031.16	ENST00000331302.12	2719	10	60	-41	43	41	multi-exon	FALSE	canonical	1	1	junction_8	16.8596237674584	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCACACACCTGATGCTG	64	False	NA	NA	False	GGGGCT	-21	NA	352747	212347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_213924_215653_215803_219622_219737_247110_247286_281767_281855_319419_319550_321271_321416_327466_327580_333758_333935_352711
H1_mix_00040774	chr17	-	2459	9	FSM	ENSG00000181031.16	ENST00000323434.12	2809	9	350	0	43	0	multi-exon	FALSE	canonical	0	0	junction_4	19.1894339416253	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCACCGAGCCAGTGTGT	64	False	NA	-32	True	ATTAAA	-17	NA	352747	212501	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_213924_215653_215803_219622_219737_247110_247286_319419_319550_321271_321416_327466_327580_333758_333935_352711
H1_mix_00040776	chr17	-	7953	1	FSM	ENSG00000179409.11	ENST00000576778.1	4729	1	-2950	-274	-37	72	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTCCAGCCCTGGCTCT	491	False	NA	62	True	NA	NA	NA	752301	744348	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_744300_752300
H1_mix_00040779	chr17	-	295	3	FSM	ENSG00000167693.17	ENST00000571338.1	586	3	291	0	291	0	multi-exon	FALSE	canonical	0	0	junction_2	235.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAGCAGCAGCCTGGAGG	NA	False	NA	NA	False	NA	NA	NA	929760	823686	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_823766_825960_826079_929662
H1_mix_00040782	chr17	-	4780	32	FSM	ENSG00000197879.17	ENST00000575158.5	4804	32	24	0	24	0	multi-exon	FALSE	canonical	0	0	junction_31	58.6085623403661	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTCTCCTTATGAATAT	6519	False	NA	0	True	AATAAA	-19	NA	1486177	1464185	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_1465753_1467241_1467342_1467479_1467578_1467839_1467911_1467987_1468124_1468252_1468309_1468402_1468497_1469530_1469615_1470174_1470335_1470434_1470520_1470620_1470690_1471070_1471148_1471222_1471337_1471906_1472025_1472122_1472229_1474609_1474691_1474811_1474859_1474937_1475033_1477504_1477597_1477890_1477972_1478086_1478193_1478409_1478493_1478615_1478736_1479430_1479503_1479591_1479706_1480526_1480626_1480705_1480886_1482477_1482559_1482860_1483060_1483609_1483726_1484147_1484304_1486054
H1_mix_00040783	chr17	-	2603	11	NIC	ENSG00000132376.20	novel	2706	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_9	48.5176256632577	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGCGTGTGACTGATGA	4959	False	NA	-6	True	NA	NA	NA	1516618	1494576	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_1495880_1496059_1496165_1496318_1496403_1496665_1496804_1497935_1498123_1506979_1507090_1508114_1508227_1509177_1509354_1509682_1509800_1513871_1513980_1516455
H1_mix_00040784	chr17	-	2890	12	NIC	ENSG00000132376.20	novel	2880	13	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_10	67.3742477226896	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGCGTGTGACTGATGA	-13	True	NA	-6	True	NA	NA	NA	1516674	1494576	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_1495880_1496059_1496165_1496318_1496403_1496665_1496804_1497935_1498123_1506979_1507090_1508114_1508227_1509177_1509354_1509682_1509800_1513871_1513980_1515887_1516119_1516455
H1_mix_00040785	chr17	-	233	1	FSM	ENSG00000275084.4	ENST00000608459.2	222	1	29	-40	29	40	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGATTTAATCTTGTTTT	8188	False	NA	NA	False	AAAAAG	-1	NA	2329208	2328975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_2329000_2329200
H1_mix_00040786	chr17	-	274	1	FSM	ENSG00000212163.6	ENST00000609620.2	191	1	75	-158	75	158	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAACCCAGTAGGCGGAG	7101	False	NA	NA	False	NA	NA	NA	2330295	2330021	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_2330000_2330300
H1_mix_00040787	chr17	-	794	4	FSM	ENSG00000167721.11	ENST00000571806.1	794	4	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_3	324.266351425285	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACACTCAACAGGAGGCAG	739	False	NA	NA	False	AGTAAA	-42	NA	2336657	2334784	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_2334897_2335259_2335395_2335510_2335731_2336330
H1_mix_00040792	chr17	-	3458	8	NNC	ENSG00000197417.9	novel	3788	7	NA	NA	0	56369	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	98.3347053980144	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAAATTACAGGTGAAGA	2	True	NA	NA	False	NA	NA	NA	3636250	3551870	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_3551902_3608600_3610973_3615336_3615538_3621236_3621413_3623338_3623492_3624047_3624232_3630204_3630347_3636051
H1_mix_00040793	chr17	-	5123	15	NIC	ENSG00000262304.2	novel	4753	14	NA	NA	-34	1791	intron_retention	FALSE	canonical	1	2	junction_8	133.177493961852	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACTTCTTTTTCCGAGGG	-4	True	NA	NA	False	NA	NA	NA	3636283	3583357	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_3583431_3585767_3585927_3588187_3588368_3589806_3590106_3590251_3590393_3590963_3591117_3591186_3591354_3592066_3592384_3608426_3610973_3615336_3615538_3621236_3621413_3623338_3623492_3624047_3624232_3630204_3630347_3636051
H1_mix_00040794	chr17	-	1717	1	NIC	ENSG00000257950.3	novel	5905	15	NA	NA	23359	-8056	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGAGATGGGGTTTCTCC	NA	False	NA	NA	False	NA	NA	NA	3672835	3671118	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_3671100_3672800
H1_mix_00040795	chr17	-	523	2	FSM	ENSG00000074356.17	ENST00000572988.1	518	2	0	-5	0	-2	multi-exon	FALSE	canonical	2	2	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTTGTTCTAGTGGCA	NA	False	NA	-4	True	AATAAA	-18	NA	3803382	3802159	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_3802482_3803181
H1_mix_00040796	chr17	-	2926	14	NIC	ENSG00000074356.17	novel	12772	13	NA	NA	12	-2	combination_of_known_junctions	FALSE	canonical	3	61	junction_1	54.886758084421	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAACTGTATTGTCCCA	5	True	NA	NA	False	AATAAA	-34	NA	3846234	3811529	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_3812655_3813116_3813280_3814321_3814484_3816115_3816271_3818262_3818573_3821248_3821353_3821952_3822053_3824941_3825051_3825766_3825844_3826086_3826216_3829242_3829369_3840099_3840206_3843085_3843152_3846040
H1_mix_00040797	chr17	-	4194	23	FSM	ENSG00000074370.18	ENST00000397035.7	4182	23	0	-12	0	7	multi-exon	FALSE	canonical	0	0	junction_1	44.5536402497499	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCGTCTGTTTTCCTGGG	785	False	NA	4	True	AATAAA	-30	NA	3964419	3923862	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_3924802_3925395_3925442_3928226_3928328_3928662_3928781_3929327_3929446_3930300_3930435_3935191_3935278_3936266_3936470_3937415_3937637_3940970_3941307_3941435_3941655_3942605_3942732_3943390_3943523_3944703_3944807_3945059_3945149_3947390_3947856_3950510_3950597_3950692_3950774_3951250_3951390_3951580_3951686_3953346_3953430_3953692_3953711_3964173
H1_mix_00040798	chr17	-	4833	22	FSM	ENSG00000074370.18	ENST00000309890.11	4826	22	0	-7	0	7	multi-exon	FALSE	canonical	1	1	junction_1	38.9931676089723	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCGTCTGTTTTCCTGGG	0	True	NA	4	True	AATAAA	-30	NA	3964464	3923862	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_3925442_3928226_3928328_3928662_3928781_3929327_3929446_3930300_3930435_3935191_3935278_3936266_3936470_3937415_3937637_3940970_3941307_3941435_3941655_3942605_3942732_3943390_3943523_3944703_3944807_3945059_3945149_3947390_3947856_3950510_3950597_3950692_3950774_3951250_3951390_3951580_3951686_3953346_3953430_3953692_3953711_3964173
H1_mix_00040799	chr17	-	320	3	FSM	ENSG00000074755.15	ENST00000575428.1	563	3	243	0	243	0	multi-exon	FALSE	canonical	3	15	junction_2	3	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCAGAGCTATGCCAAGC	NA	False	NA	NA	False	NA	NA	NA	4019769	4017647	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_4017731_4017835_4017972_4019668
H1_mix_00040800	chr17	-	3469	18	NNC	ENSG00000141456.16	novel	5084	17	NA	NA	14	79835	intron_retention	FALSE	non_canonical	0	0	junction_1	216.179135637834	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGTGCGTCCAAAGGCA	8528	False	NA	NA	False	NA	NA	NA	4704092	4589938	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_4589985_4671389_4671532_4671690_4673146_4673249_4673457_4673618_4673675_4674509_4674670_4674808_4674957_4675078_4675196_4675273_4675363_4675796_4675885_4676035_4676163_4676356_4676508_4676752_4676813_4682501_4682574_4682802_4682953_4690887_4690994_4691377_4691443_4703862
H1_mix_00040802	chr17	-	4324	3	NIC	ENSG00000167840.13	novel	1553	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	127	junction_1	3.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTCCTGTGTCTTTCTT	18	True	NA	-5	True	CATAAA	-19	NA	5111845	5105734	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_5109869_5111075_5111220_5111799
H1_mix_00040803	chr17	-	1431	4	NIC	ENSG00000167840.13	novel	1553	5	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	40	junction_1	42.7577153531643	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGGACTGGATCCCATAAA	13	True	NA	-43	True	NA	NA	NA	5111850	5105772	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_5106534_5109393_5109869_5111075_5111220_5111799
H1_mix_00040806	chr17	-	1572	12	FSM	ENSG00000198920.11	ENST00000542826.6	1572	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_11	11.421308199665	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCCAGGCCCAGAAGGTG	2	True	NA	NA	False	NA	NA	NA	6620907	6579653	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_6579865_6589778_6590004_6590509_6590631_6594971_6595054_6596157_6596344_6599236_6599321_6600379_6600459_6606872_6606963_6607180_6607271_6608347_6608465_6609993_6610161_6620787
H1_mix_00040807	chr17	-	352	1	FSM	ENSG00000200914.1	ENST00000364044.1	108	1	-252	8	-252	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGATCAGCTAAGTTAGT	NA	False	NA	NA	False	NA	NA	NA	6601303	6600951	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_6601000_6601300
H1_mix_00040808	chr17	-	325	3	FSM	ENSG00000108590.11	ENST00000575197.1	593	3	59	209	0	-193	multi-exon	FALSE	canonical	3	15	junction_1	70	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAACACATCGGGAAAATG	13	True	NA	NA	False	NA	NA	NA	6651575	6644487	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_6644660_6650355_6650434_6651500
H1_mix_00040809	chr17	-	283	4	FSM	ENSG00000108590.11	ENST00000574128.1	619	4	0	336	0	-336	multi-exon	FALSE	canonical	3	7	junction_3	49.6409329306191	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTCCAATATGAACACTTC	6337	False	NA	NA	False	NA	NA	NA	6651427	6644630	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_6644660_6649981_6650079_6650355_6650434_6651348
H1_mix_00040810	chr17	-	4529	17	NIC	ENSG00000132535.22	novel	3446	20	NA	NA	0	0	intron_retention	TRUE	canonical	3	18	junction_1	7.57024396898805	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGTGGCCTGGTTA	-1	True	NA	NA	False	NA	NA	NA	7208338	7189889	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_7190815_7191266_7193118_7193482_7193585_7193666_7193715_7193843_7193872_7193963_7194001_7194318_7194496_7196219_7196335_7196472_7196576_7196756_7197053_7202902_7203048_7203192_7203330_7203423_7203594_7203691_7203817_7204007_7204059_7204198_7204253_7208173
H1_mix_00040811	chr17	-	846	5	NNC	ENSG00000170296.10	novel	1319	4	NA	NA	0	49044	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	967.890586533416	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGCCCCTGTGGGCGGG	33	True	NA	NA	False	NA	NA	NA	7242358	7190963	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_7190988_7240413_7240920_7241341_7241461_7241600_7241680_7242240
H1_mix_00040812	chr17	-	995	3	FSM	ENSG00000004975.12	ENST00000576949.1	995	3	0	0	0	0	multi-exon	FALSE	canonical	3	542	junction_1	9	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGAGACAGAAACCGAGT	-16	True	NA	NA	False	NA	NA	NA	7234517	7230122	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7230156_7230284_7230798_7234068
H1_mix_00040813	chr17	-	1954	4	FSM	ENSG00000040633.13	ENST00000576955.5	1944	4	0	-10	0	1	multi-exon	FALSE	canonical	1	3	junction_3	305.911025554091	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCACTGTCCTGCTCGG	-12	True	NA	-3	True	AATAAA	-27	NA	7239455	7235027	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7235841_7235929_7236768_7237384_7237478_7239245
H1_mix_00040814	chr17	-	1006	4	FSM	ENSG00000040633.13	ENST00000572789.5	1006	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	268.991119225565	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGTGAGAGGTTCGGGCT	-4	True	NA	NA	False	NA	NA	NA	7238258	7235933	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7236768_7237384_7237478_7237628_7237661_7238211
H1_mix_00040817	chr17	-	573	5	FSM	ENSG00000132522.16	ENST00000573684.5	573	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	425.863461099916	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCTGCTGCTGTTTGT	1631	False	NA	-7	True	AATAAA	-17	NA	7313721	7312659	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7312840_7313028_7313098_7313211_7313292_7313379_7313470_7313567
H1_mix_00040819	chr17	-	5134	29	NIC	ENSG00000215041.10	novel	5207	29	NA	NA	0	0	intron_retention	FALSE	canonical	1	3	junction_19	18.630674727887	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTCGGCCTCTCTCTCGC	74	False	NA	-3	True	AATAAA	-18	NA	7329266	7315627	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_7316328_7317204_7317371_7317460_7317574_7317787_7317933_7318064_7318173_7318268_7318357_7318494_7318675_7319049_7319209_7320758_7320924_7321111_7321274_7321360_7321460_7321559_7321788_7321864_7322011_7322734_7322867_7322947_7323124_7323484_7323564_7323646_7323724_7323813_7324013_7324107_7324267_7324394_7324481_7324798_7324981_7325208_7325474_7325640_7325714_7326254_7326344_7326436_7326549_7326710_7327010_7327164_7327231_7327439_7327885_7329030
H1_mix_00040820	chr17	-	1666	8	NIC	ENSG00000187838.17	novel	1752	8	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_3	87.4836427859634	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTATGTAATAGGGGAGG	9585	False	NA	-1	True	TATAAA	-26	NA	7394511	7389726	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_7390442_7390633_7390796_7392790_7392881_7393143_7393365_7393466_7393510_7393600_7393837_7394103_7394268_7394476
H1_mix_00040821	chr17	-	1671	8	NIC	ENSG00000187838.17	novel	1752	8	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_3	100.284900281597	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTATGTAATAGGGGAGG	9584	False	NA	-1	True	TATAAA	-26	NA	7394512	7389726	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_7390442_7390633_7390796_7392790_7392881_7393143_7393365_7393466_7393510_7393600_7393837_7394103_7394272_7394476
H1_mix_00040822	chr17	-	1506	6	NNC	ENSG00000187838.17	novel	2032	8	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_3	91.9360647406664	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAGATGTATGTAATAG	9825	False	NA	-7	True	TATAAA	-20	NA	7394271	7389732	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_7390442_7390633_7390796_7392790_7392979_7393466_7393510_7393600_7393837_7394103
H1_mix_00040826	chr17	-	2660	10	FSM	ENSG00000141510.18	ENST00000610292.4	2639	10	0	-21	0	21	multi-exon	FALSE	canonical	3	224	junction_9	22.7840099875134	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCAGCAGGTGCAGGGGTG	7	True	NA	21	True	NA	NA	NA	7687481	7668380	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7669691_7670608_7670716_7673534_7673609_7673700_7673838_7674180_7674291_7674858_7674972_7675052_7675237_7675993_7676273_7676381_7676623_7687376
H1_mix_00040827	chr17	-	556	5	FSM	ENSG00000183011.14	ENST00000576861.5	556	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	208.662856062118	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGGCCTGTGTCTGTGTGT	5501	False	NA	-5	True	ATTAAA	-12	NA	7885209	7856685	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_7856844_7857014_7857199_7866490_7866559_7883234_7883336_7885164
H1_mix_00040828	chr17	-	729	2	FSM	ENSG00000179148.10	ENST00000583808.1	751	2	22	0	22	0	multi-exon	FALSE	canonical	2	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCTTTCTACGTTCTCT	219	False	NA	NA	False	NA	NA	NA	8103493	8096248	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8096807_8103322
H1_mix_00040829	chr17	-	4700	24	NNC	ENSG00000179094.16	novel	4676	23	NA	NA	-13	42241	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	26.8715350340293	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACCAAAAGTATATTTCAAA	7200	False	NA	NA	False	AAAACA	-3	NA	8156373	8098230	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_8098257_8140472_8141341_8141804_8141956_8142268_8142459_8142648_8142836_8143265_8143877_8144750_8144994_8145957_8146138_8146371_8146503_8146593_8146766_8146896_8147003_8147249_8147382_8147469_8147579_8147673_8147828_8147996_8148104_8148180_8148260_8148643_8148787_8149258_8149311_8149461_8149664_8149754_8149877_8149970_8150126_8150218_8150318_8150431_8150846_8156306
H1_mix_00040830	chr17	-	4406	23	NNC	ENSG00000179094.16	novel	4676	23	NA	NA	15	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_22	32.4680707747583	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTTTGTGGAATGAAGTT	2	True	NA	-2	True	GATAAA	-9	NA	8156340	8140469	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_8141341_8141804_8141956_8142268_8142459_8142648_8142836_8143265_8143877_8144750_8144994_8145957_8146138_8146371_8146503_8146593_8146766_8146896_8147003_8147249_8147382_8147469_8147579_8147673_8147828_8147996_8148104_8148180_8148260_8148643_8148787_8149258_8149311_8149461_8149664_8149754_8149877_8149970_8150123_8150218_8150318_8150431_8150611_8156306
H1_mix_00040832	chr17	-	2358	3	FSM	ENSG00000179029.15	ENST00000532998.5	2358	3	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATTTAAAAAAAT	1	True	NA	NA	False	NA	NA	NA	8176373	8173741	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8175858_8175958_8176027_8176199
H1_mix_00040839	chr17	-	2804	6	FSM	ENSG00000125434.11	ENST00000380067.6	2785	6	0	-19	0	18	multi-exon	FALSE	canonical	1	2	junction_2	7.16658914686757	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTTTAACTTCACTATA	515	False	NA	16	True	ATTAAA	-40	NA	8294852	8287744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8289644_8289853_8289985_8290841_8290977_8291332_8291486_8292522_8292589_8294432
H1_mix_00040840	chr17	-	1541	7	FSM	ENSG00000125434.11	ENST00000580340.5	1541	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.96694560181141	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAATGGCCCCCATGGGGA	529	False	NA	NA	False	NA	NA	NA	8294838	8288860	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8289441_8289573_8289644_8289853_8289985_8290841_8290977_8291332_8291486_8292522_8292589_8294432
H1_mix_00040841	chr17	-	7685	42	NIC	ENSG00000133026.14	novel	7809	43	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	124	junction_41	275.911082850074	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGAATCTGTTTTCTCAC	629	False	NA	-18	True	AATAAA	-33	NA	8630710	8474211	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_8475949_8476875_8477049_8478337_8478447_8480109_8480319_8480401_8480526_8481321_8481411_8484137_8484267_8487432_8487595_8490339_8490553_8492296_8492510_8492775_8493025_8493732_8493886_8495136_8495242_8499269_8499477_8500825_8500971_8504693_8504907_8506317_8506490_8508553_8508678_8509811_8509950_8512450_8512658_8513537_8513670_8513785_8513895_8518630_8518792_8518880_8518951_8520877_8521000_8521091_8521286_8535386_8535502_8535757_8535932_8542106_8542281_8545447_8545601_8546543_8546663_8548312_8548409_8548643_8548788_8552045_8552145_8553954_8554019_8569719_8569813_8577235_8577339_8589080_8589109_8604825_8604983_8622901_8623278_8623423_8623498_8630653
H1_mix_00040843	chr17	-	7647	42	NIC	ENSG00000133026.14	novel	7809	43	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_36	288.94898059154	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGAATCTGTTTTCTCAC	9	True	NA	-18	True	AATAAA	-33	NA	8630716	8474211	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_8475949_8476875_8477049_8478337_8478447_8480109_8480319_8480401_8480526_8481321_8481411_8484137_8484267_8487432_8487595_8490339_8490553_8492296_8492510_8492775_8493025_8493732_8493886_8495136_8495242_8499269_8499477_8500825_8500971_8504693_8504907_8506317_8506490_8508553_8508678_8509811_8509950_8512450_8512658_8513537_8513670_8513785_8513895_8518630_8518792_8518880_8518951_8520877_8521000_8521091_8521286_8535386_8535502_8535757_8535932_8542106_8542281_8545447_8545601_8546543_8546663_8548312_8548409_8548643_8548788_8552045_8552145_8553954_8554019_8569719_8569813_8576642_8576673_8577235_8577339_8589080_8589109_8604825_8604983_8622901_8623278_8630653
H1_mix_00040844	chr17	-	4488	19	NIC	ENSG00000141506.15	novel	4491	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_7	30.6974483195808	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATGACCAGTAGTTACT	1	True	NA	-12	True	AATAAA	-18	NA	8965707	8878915	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_8880787_8880904_8881018_8881629_8881713_8881787_8881882_8884706_8884784_8886228_8886323_8886476_8886603_8887095_8887222_8887520_8887684_8888170_8888892_8889138_8889223_8889972_8890127_8890737_8890913_8893585_8893656_8904776_8904916_8905668_8905738_8909073_8909175_8911391_8911508_8965595
H1_mix_00040845	chr17	-	951	4	FSM	ENSG00000141506.15	ENST00000583810.5	1126	4	175	0	175	0	multi-exon	FALSE	canonical	3	81	junction_2	10.6562449087639	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGTCCCTCTCTGTGGAG	2673	False	NA	NA	False	NA	NA	NA	8882333	8880577	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_8880787_8880904_8881018_8881629_8881713_8881787
H1_mix_00040847	chr17	-	236	1	FSM	ENSG00000273816.1	ENST00000614522.1	232	1	4	-8	4	8	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAATATAGCCTCTCAGA	NA	False	NA	NA	False	AATAAA	-22	NA	9244893	9244657	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_9244700_9244900
H1_mix_00040850	chr17	-	2376	10	FSM	ENSG00000007237.19	ENST00000580865.5	2417	10	41	0	41	0	multi-exon	FALSE	canonical	3	13	junction_1	4.19288050313627	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCCTCTCTCCATCTTCC	73	False	NA	NA	False	NA	NA	NA	9959421	9915977	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_9917342_9918000_9918100_9919625_9919706_9925475_9925600_9926640_9926770_9934165_9934245_9940125_9940201_9943120_9943237_9946893_9946984_9959201
H1_mix_00040852	chr17	-	295	1	FSM	ENSG00000261433.1	ENST00000569543.1	541	1	148	98	148	-98	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTTCATAAACTTGTTGCT	NA	False	NA	NA	False	NA	NA	NA	10658934	10658639	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_10658600_10658900
H1_mix_00040853	chr17	-	2829	7	NIC	ENSG00000154957.14	novel	2261	7	NA	NA	-26	-1	intron_retention	FALSE	canonical	2	9	junction_6	30.4466746952767	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTATTTGTTTGTTCAC	59	False	NA	-8	True	AATAAA	-19	NA	11997398	11977445	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_11978745_11983296_11983405_11984112_11984198_11990461_11990551_11990973_11991164_11992442_11992912_11996809
H1_mix_00040854	chr17	-	3020	25	NNC	ENSG00000006744.19	novel	3767	24	NA	NA	0	38892	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	175.809378305027	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATGCATGTTAATAATAC	-30	True	NA	NA	False	AAAAAG	-3	NA	13018027	12952719	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_12952752_12992390_12993046_12993686_12993832_12994424_12994504_12994763_12994885_12994962_12995063_12995702_12995813_12995939_12995979_12996546_12996686_12998411_12998509_13000155_13000275_13002273_13002360_13002440_13002580_13003478_13003575_13004988_13005102_13005752_13005826_13005920_13005980_13010612_13010672_13011662_13011783_13013206_13013276_13014438_13014497_13015767_13015833_13016861_13016933_13017070_13017122_13017702
H1_mix_00040856	chr17	-	1312	3	FSM	ENSG00000236088.11	ENST00000662986.1	1367	3	19	36	11	-8	multi-exon	FALSE	canonical	0	0	junction_1	29.5	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAAATGTGTGTGTGTG	-3	True	NA	NA	False	AATAAA	-6	NA	14069464	13776639	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_13777350_14034007_14034417_14069271
H1_mix_00040857	chr17	-	4164	4	NIC	ENSG00000239704.11	novel	632	3	NA	NA	-14581	-6	combination_of_known_splicesites	FALSE	canonical	3	19	junction_3	34.08160142299	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATCTCTTTTGTTCTT	NA	False	NA	-18	True	AATAAA	-15	NA	15518189	15436020	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_15438201_15440207_15440286_15503097_15503233_15516418
H1_mix_00040858	chr17	-	2925	9	NNC	ENSG00000259024.6	novel	2833	7	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_4	129.544152704782	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATCTCTTTTGTTCTT	168	False	NA	-18	True	AATAAA	-15	NA	15563454	15436020	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_15438201_15440207_15440286_15503097_15503233_15516418_15516563_15545784_15545917_15547058_15547149_15553764_15553830_15555281_15555365_15563436
H1_mix_00040861	chr17	-	4079	6	FSM	ENSG00000175106.17	ENST00000518321.6	4079	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	116.554879777725	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGACATGTGTAATCTCAT	5	True	NA	NA	False	TATAAA	-21	NA	15563483	15536979	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_15540562_15545784_15545917_15547058_15547149_15553684_15553830_15555281_15555365_15563436
H1_mix_00040865	chr17	-	3515	10	NIC	ENSG00000221926.13	novel	3358	12	NA	NA	0	-3	intron_retention	FALSE	canonical	3	26	junction_5	10.3279555898864	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGTGCCAGATACCGTT	22	False	NA	-10	True	AATAAA	-19	NA	15684283	15627962	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_15629199_15631618_15631715_15632508_15632675_15636035_15636270_15642720_15642817_15677175_15677281_15677574_15677722_15680864_15680954_15682853_15682952_15683035
H1_mix_00040867	chr17	-	2297	10	NIC	ENSG00000221926.13	novel	3358	12	NA	NA	0	0	intron_retention	FALSE	canonical	2	4	junction_6	18.6964048831735	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTATGTGCCAGATACC	22	False	NA	-13	True	AATAAA	-16	NA	15684283	15627965	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_15629199_15631618_15631715_15632508_15632675_15636035_15636270_15642720_15642817_15658801_15658877_15680864_15680954_15682853_15682952_15683035_15683158_15684195
H1_mix_00040870	chr17	-	1114	4	FSM	ENSG00000214941.8	ENST00000497434.6	1104	4	0	-10	0	1	multi-exon	FALSE	canonical	2	22	junction_3	148.077307136809	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGACTCAGCATAACTTAC	NA	False	NA	-3	True	GATAAA	-33	NA	15980367	15976558	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_15977093_15977578_15977914_15978043_15978164_15980242
H1_mix_00040871	chr17	-	970	6	FSM	ENSG00000214941.8	ENST00000476496.5	969	6	0	-1	0	1	multi-exon	FALSE	canonical	3	53	junction_5	251.610333651064	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGACTCAGCATAACTTAC	882	False	NA	-3	True	GATAAA	-33	NA	15999588	15976558	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_15977093_15978043_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999502
H1_mix_00040872	chr17	-	8500	46	NIC	ENSG00000141027.22	novel	10705	46	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	146	junction_32	49.693996954696	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACAGTAGATTATTTGTG	9	True	NA	-13	True	AATAAA	-20	NA	16215528	16031403	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_16032484_16034764_16034945_16039432_16039655_16040440_16040495_16046950_16047094_16048844_16048989_16057513_16057738_16057906_16058065_16058470_16058600_16061400_16061895_16062104_16062271_16064067_16064188_16064869_16065020_16065484_16065695_16067893_16068122_16070164_16070526_16071408_16071666_16072144_16072229_16073428_16073570_16075533_16075703_16079963_16080065_16080407_16080510_16080606_16080728_16086281_16086443_16091862_16092059_16098366_16098497_16101249_16101806_16108785_16108913_16117887_16118028_16119422_16119486_16121051_16121270_16126081_16126207_16137310_16137413_16138157_16138213_16139007_16139187_16143605_16143697_16146375_16146549_16149450_16149518_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16215361
H1_mix_00040873	chr17	-	8461	46	NIC	ENSG00000141027.22	novel	10705	46	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	65.18178189769	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACAGTAGATTATTTGTG	9	True	NA	-13	True	AATAAA	-20	NA	16215528	16031403	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_16032484_16034764_16034945_16039432_16039655_16040440_16040492_16046989_16047094_16048844_16048989_16057513_16057738_16057906_16058065_16058470_16058600_16061400_16061895_16062104_16062271_16064067_16064188_16064869_16065020_16065484_16065695_16067893_16068122_16070164_16070526_16071408_16071666_16072144_16072229_16073428_16073570_16075533_16075703_16079963_16080065_16080407_16080510_16080606_16080728_16086281_16086443_16091862_16092059_16098366_16098497_16101249_16101806_16108785_16108913_16117887_16118028_16119422_16119486_16121051_16121270_16126081_16126210_16137310_16137413_16138157_16138213_16139007_16139187_16143605_16143697_16146375_16146549_16149450_16149518_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16215361
H1_mix_00040876	chr17	-	571	2	FSM	ENSG00000166582.11	ENST00000472570.2	554	2	0	-17	0	17	multi-exon	FALSE	canonical	3	2327	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTTGTACTGTGATTT	8708	False	NA	0	True	AATAAA	-37	NA	16344742	16342516	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_16342942_16344596
H1_mix_00040878	chr17	-	736	1	FSM	ENSG00000235554.1	ENST00000414124.1	1034	1	432	-134	432	134	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGCCAAATTGGATGAAAAA	571	False	NA	NA	False	AAAACA	-24	NA	16617449	16616713	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_16616700_16617400
H1_mix_00040879	chr17	-	4237	6	FSM	ENSG00000197566.10	ENST00000311331.12	4241	6	3	1	3	-1	multi-exon	FALSE	canonical	2	8	junction_5	2.56124969497314	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTGCGTTTTATTTATT	-10	True	NA	NA	False	ATTAAA	-15	NA	16653847	16620734	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_16624510_16633861_16633958_16634629_16634757_16647328_16647395_16649657_16649747_16653763
H1_mix_00040882	chr17	-	1052	8	FSM	ENSG00000133027.18	ENST00000395781.6	1050	8	0	-2	0	0	multi-exon	FALSE	canonical	2	2	junction_3	227.847335212122	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTCCAGCCTCTGTC	-18	True	NA	-10	True	AATAAA	-17	NA	17591708	17505562	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_17505849_17506226_17506302_17507168_17507200_17509433_17509546_17512508_17512655_17522279_17522396_17576919_17577028_17591530
H1_mix_00040885	chr17	-	2412	11	FSM	ENSG00000176974.21	ENST00000352886.10	2437	11	25	0	4	0	multi-exon	FALSE	canonical	3	21	junction_8	88.403676394141	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTTTGGCATTGACTCT	-7	True	NA	3	True	AATAAA	-32	NA	18363538	18327859	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_18328920_18329277_18329389_18330554_18330672_18333165_18333289_18335558_18335676_18340042_18340256_18340731_18340814_18347495_18347657_18353671_18353818_18355885_18356001_18363371
H1_mix_00040886	chr17	-	2711	1	NIC	ENSG00000249459.11	novel	5145	4	NA	NA	18481	1282	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACACCAGGGCATACTTCC	NA	False	NA	NA	False	AGTAAA	-21	NA	18663365	18660654	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_18660700_18663400
H1_mix_00040887	chr17	-	476	3	NIC	ENSG00000240445.6	novel	5859	4	NA	NA	15	-18	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	8.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTGCGCCTCACGGCCA	NA	False	NA	NA	False	NA	NA	NA	18682299	18680768	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_18680830_18681614_18681934_18682203
H1_mix_00040888	chr17	-	1882	1	FSM	ENSG00000263045.1	ENST00000573133.1	187	1	-1790	95	-1790	-95	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCAACTACTCAACTATCA	NA	False	NA	NA	False	NA	NA	NA	18988124	18986242	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_18986200_18988100
H1_mix_00040889	chr17	-	886	1	FSM	ENSG00000264940.5	ENST00000580533.1	581	1	0	-305	0	305	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCGAAGTTCTGCGATTAC	-6	True	NA	NA	False	NA	NA	NA	19190245	19189359	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19189400_19190200
H1_mix_00040890	chr17	-	591	5	FSM	ENSG00000108641.20	ENST00000646248.1	586	5	0	-5	0	0	multi-exon	FALSE	canonical	3	6	junction_1	94.6265686792034	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTGGGGCTGCCTTCTCT	4867	False	NA	-1	True	AATAAA	-22	NA	19357876	19343169	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19343496_19343789_19343858_19347268_19347332_19347783_19347881_19357839
H1_mix_00040891	chr17	-	753	7	FSM	ENSG00000108641.20	ENST00000642870.2	744	7	0	-9	0	0	multi-exon	FALSE	canonical	3	7	junction_6	83.7531093950149	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTGGGGCTGCCTTCTCT	-2	True	NA	-1	True	AATAAA	-22	NA	19377910	19343169	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19343462_19343789_19343858_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19377858
H1_mix_00040892	chr17	-	967	2	Genic_Genomic	ENSG00000189343.7	novel	883	1	NA	NA	-28	16690	multi-exon	FALSE	non_canonical	0	0	junction_1	0	157	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGGTCCTATGGAGTGT	-1	True	NA	NA	False	NA	NA	NA	19446880	19429279	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr17_-_19429301_19445934
H1_mix_00040893	chr17	-	260	2	FSM	ENSG00000108602.18	ENST00000487650.2	567	2	146	161	146	35	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCGTGACCCCTGAAGAGC	7433	False	NA	NA	False	NA	NA	NA	19741210	19740335	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19740478_19741092
H1_mix_00040894	chr17	-	236	4	FSM	ENSG00000108599.15	ENST00000583951.1	236	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	76.7202711152665	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCAGTGACATTATGCAGC	NA	False	NA	NA	False	NA	NA	NA	19931866	19909238	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19909277_19909925_19909979_19920035_19920119_19931804
H1_mix_00040895	chr17	-	368	1	FSM	ENSG00000266126.1	ENST00000583067.1	366	1	81	-83	81	83	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCATTACCACATCGATTT	NA	False	NA	NA	False	NA	NA	NA	19929656	19929288	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_19929300_19929700
H1_mix_00040897	chr17	-	1191	1	FSM	ENSG00000214832.5	ENST00000457924.2	1132	1	77	-136	77	136	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACACGCAGAAACCATTC	NA	False	NA	NA	False	NA	NA	NA	20376763	20375572	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_20375600_20376800
H1_mix_00040898	chr17	-	727	1	FSM	ENSG00000265683.1	ENST00000582878.1	727	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAGGGAGAAACACACTG	1224	False	NA	NA	False	NA	NA	NA	27352584	27351857	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_27351900_27352600
H1_mix_00040899	chr17	-	2526	3	ISM	ENSG00000232859.10	ENST00000379103.7	1685	5	8456	41	-568	3	intron_retention	FALSE	canonical	3	40	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTGTCTTCTCAACTGAT	9491	False	NA	-2	True	AGTAAA	-21	NA	27883865	27878354	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_27879491_27880273_27880367_27882568
H1_mix_00040900	chr17	-	432	3	FSM	ENSG00000232859.10	ENST00000503642.1	432	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	19.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACAGTTGAGAATGGTCC	845	False	NA	NA	False	NA	NA	NA	27892511	27880190	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_27880367_27882568_27882713_27892399
H1_mix_00040901	chr17	-	291	2	FSM	ENSG00000266190.1	ENST00000578374.1	291	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCTTCCACTGTGCTGCC	NA	False	NA	NA	False	NA	NA	NA	28022265	28021667	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28021781_28022087
H1_mix_00040902	chr17	-	1485	1	FSM	ENSG00000109083.14	ENST00000583796.1	1485	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATGTACCTTTTTTCCT	5655	False	NA	-14	True	AATAAA	-18	NA	28329810	28328325	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28328300_28329800
H1_mix_00040903	chr17	-	772	1	FSM	ENSG00000279532.1	ENST00000623773.1	629	1	19	-162	19	162	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCACCAATCACCAGGTAA	NA	False	NA	NA	False	NA	NA	NA	28374282	28373510	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28373500_28374300
H1_mix_00040904	chr17	-	5363	4	FSM	ENSG00000076351.13	ENST00000618626.1	5363	4	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	7.03957069398096	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGATGAGTGTCTTTGTAT	-11	True	NA	9	True	NA	NA	NA	28406201	28395675	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28399714_28400609_28400767_28404615_28405469_28405886
H1_mix_00040905	chr17	-	4194	4	FSM	ENSG00000109103.12	ENST00000484980.5	4189	4	0	-5	0	5	multi-exon	FALSE	canonical	3	324	junction_1	26.0810701893581	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGCCAGCCTCTGTGTG	6756	False	NA	-3	True	AATAAA	-23	NA	28551802	28546702	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28547410_28547676_28547850_28547998_28548102_28548591
H1_mix_00040907	chr17	-	2662	2	NNC	ENSG00000167524.16	novel	3772	12	NA	NA	1208	7	intron_retention	TRUE	non_canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTTGATAGAGTCTTCA	4462	False	NA	1	True	AATAAA	-25	NA	28609730	28601819	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_28602642_28607890
H1_mix_00040908	chr17	-	2599	1	FSM	ENSG00000167524.16	ENST00000579457.1	2975	1	1208	-832	1208	831	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTCTTTTTTTTTTTT	4462	False	NA	NA	False	NA	NA	NA	28609730	28607131	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28607100_28609700
H1_mix_00040909	chr17	-	4406	24	NNC	ENSG00000007202.15	novel	6852	39	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_6	104.329309951393	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTCATTTTTGTGTGTGT	9426	False	NA	-11	True	AAAAAG	-15	NA	28634670	28614446	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_28615247_28615663_28615799_28616095_28616198_28616378_28616510_28616617_28616754_28616888_28616996_28617227_28617319_28618790_28618972_28619653_28619776_28619859_28620016_28620508_28620631_28620987_28621171_28621398_28621499_28623759_28623967_28624232_28624391_28628264_28628560_28631478_28631679_28631819_28631920_28632048_28632240_28632941_28633163_28633282_28633402_28633548_28633752_28633894_28634087_28634516
H1_mix_00040910	chr17	-	7419	39	NNC	ENSG00000007202.15	novel	7428	39	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	86.8676517448676	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTCATTTTTGTGTGTG	-9	True	NA	-12	True	AAAAAG	-14	NA	28645154	28614447	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_28615247_28615663_28615799_28616095_28616198_28616378_28616510_28616617_28616754_28616888_28617000_28617231_28617319_28618790_28618972_28619653_28619776_28619859_28620016_28620508_28620631_28620987_28621171_28621398_28621499_28623759_28623967_28624232_28624391_28628264_28628560_28631478_28631679_28631819_28631920_28632048_28632240_28632941_28633163_28633282_28633402_28633548_28633752_28633894_28634087_28634516_28635610_28636964_28637171_28637835_28638095_28638251_28638416_28638523_28638643_28639314_28639461_28639574_28639643_28639900_28640026_28640559_28640684_28641888_28642079_28642274_28642336_28642868_28642988_28643163_28643312_28643609_28643660_28644057_28644188_28644988
H1_mix_00040911	chr17	-	1787	2	Antisense	novelGene_ENSG00000240494.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGGCTGGGCTCAGGTG	NA	False	NA	NA	False	AATACA	-27	NA	28665590	28630463	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr17_-_28630489_28663828
H1_mix_00040912	chr17	-	1954	5	NIC	ENSG00000167525.15	novel	1684	5	NA	NA	21	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	23.7315717979235	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGCCACTGTGCCTGG	15	True	NA	-5	True	AATAAA	-18	NA	28711278	28703196	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_28704213_28704306_28704617_28704707_28704844_28706679_28706764_28710870
H1_mix_00040918	chr17	-	2438	10	NIC	ENSG00000132589.16	novel	2668	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	108	junction_9	512.345538301334	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGCATTGTGTCTTCTG	18	True	NA	-7	True	AATAAA	-17	NA	28897654	28879338	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_28880600_28880712_28880863_28881191_28881376_28881813_28882029_28882117_28882238_28882336_28882451_28882572_28882692_28883176_28883232_28884224_28884316_28897525
H1_mix_00040919	chr17	-	2957	9	FSM	ENSG00000109118.14	ENST00000268756.7	2957	9	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_8	25.4411084664171	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTGCTCTCTGGAATTAC	2	True	NA	NA	False	NA	NA	NA	28951490	28912143	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_28913278_28913878_28914038_28917284_28917450_28919142_28919276_28921687_28921809_28923908_28924303_28926990_28927064_28950064_28950247_28950894
H1_mix_00040920	chr17	-	7572	42	NNC	ENSG00000196535.18	novel	9980	42	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_34	37.8362890750356	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGCCAGTTTTCCTGCC	-14	True	NA	-13	True	AATAAA	-17	NA	29180418	29073520	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_29074915_29082315_29082439_29086437_29086578_29086935_29087122_29089960_29090099_29090531_29090616_29090809_29090927_29092342_29092457_29092854_29093002_29093322_29093428_29093979_29094091_29094649_29094851_29094935_29095060_29096760_29096916_29097222_29097351_29097787_29097900_29098104_29098225_29098355_29098446_29098825_29098970_29099633_29099763_29103598_29103665_29107079_29107190_29109857_29110102_29110435_29110623_29111423_29111584_29111721_29111864_29114010_29114098_29114906_29115100_29115350_29115442_29115663_29115841_29116443_29116456_29117689_29117711_29118044_29118190_29118376_29118436_29119334_29119436_29120615_29120759_29120997_29121212_29121546_29121724_29121850_29121958_29122165_29122254_29165941_29167022_29180312
H1_mix_00040921	chr17	-	861	5	FSM	ENSG00000167549.19	ENST00000579388.6	861	5	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	4.81534007106456	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGCGCGCCAGGCAGGCG	9040	False	NA	NA	False	NA	NA	NA	29617237	29615731	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_29615858_29615944_29616176_29616278_29616337_29616701_29616848_29616937
H1_mix_00040922	chr17	-	8349	6	ISM	ENSG00000141298.19	ENST00000649863.1	4471	14	94426	-4862	-35507	0	3prime_fragment	FALSE	canonical	3	9	junction_5	2.0591260281974	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTACTTCATCAGATGCA	NA	False	NA	0	True	AATAAA	-21	NA	29666991	29625937	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_29632932_29635967_29636803_29648143_29648345_29650653_29650801_29655560_29655608_29666866
H1_mix_00040923	chr17	-	640	7	FSM	ENSG00000141298.19	ENST00000577483.1	1630	7	0	990	0	899	multi-exon	FALSE	canonical	2	11	junction_5	2.54405625374562	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGATGACTTTTACTATC	100	False	NA	NA	False	NA	NA	NA	29930107	29676819	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_29676886_29677672_29677742_29684562_29684685_29695458_29695524_29702958_29703063_29793893_29793938_29929937
H1_mix_00040925	chr17	-	1273	4	NNC	ENSG00000172171.11	novel	1306	4	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	55.874860178796	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGCCTCTCAGGTTAA	0	True	NA	-5	True	AATAAA	-13	NA	30906228	30898985	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_30899607_30900412_30900563_30904065_30904530_30906190
H1_mix_00040926	chr17	-	334	3	Intergenic	novelGene_546	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAAGAAAGAAAAAA	144	False	NA	NA	False	AAAAAG	-9	NA	31034549	30969750	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_-_30969783_31027118_31027149_31034277
H1_mix_00040927	chr17	-	334	3	Intergenic	novelGene_547	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAAGAAAGAAAAAA	144	False	NA	NA	False	AAAAAG	-9	NA	31034549	30969750	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_-_30969783_31027118_31027148_31034276
H1_mix_00040928	chr17	-	643	4	NNC	ENSG00000264107.1	novel	492	3	NA	NA	1634	47	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	6.79869268479038	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACAGTAGTATTCCCTT	NA	False	NA	NA	False	AATAAA	-34	NA	31093816	31090739	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_31090936_31091024_31091119_31093372_31093492_31093582
H1_mix_00040930	chr17	-	2068	20	NIC	ENSG00000108651.10	novel	4330	19	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	146.671226740157	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGGTCTTGCTCTGTTG	101	False	NA	-7	True	ATTAAA	-17	NA	31901654	31863172	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_31863517_31865365_31865439_31866654_31866716_31868045_31868113_31873377_31873488_31873672_31873754_31875233_31875414_31878249_31878328_31878701_31878782_31880572_31880755_31884423_31884506_31885979_31886062_31887235_31887314_31889284_31889404_31892259_31892324_31892746_31892795_31894644_31894738_31894969_31895012_31899645_31899731_31901535
H1_mix_00040931	chr17	-	1412	11	NNC	ENSG00000108666.10	novel	4547	10	NA	NA	0	14794	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	194.168200280066	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTCTTGATTATAGGGCT	-15	True	NA	NA	False	NA	NA	NA	32342167	32309770	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_32309798_32331596_32331979_32333416_32333521_32334468_32334606_32334774_32334840_32335322_32335443_32337896_32337955_32338207_32338352_32339812_32339939_32341203_32341285_32341999
H1_mix_00040933	chr17	-	1952	7	NNC	ENSG00000092871.17	novel	7293	7	NA	NA	11	454	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	50.4273404679115	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGCGGAAAGGGGAAGCA	-34	True	NA	NA	False	NA	NA	NA	35089284	35011159	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_35012150_35014739_35014764_35016369_35016581_35017522_35017607_35026373_35026562_35063575_35063851_35089104
H1_mix_00040934	chr17	-	424	4	FSM	ENSG00000092871.17	ENST00000581039.1	424	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	52.0917993119412	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATCCGAGCTGTGCATG	5091	False	NA	NA	False	AATGAA	-21	NA	35021411	35012001	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_35012150_35014739_35014764_35016369_35016581_35021370
H1_mix_00040937	chr17	-	263	1	FSM	ENSG00000267315.1	ENST00000591442.1	263	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAATATCTGCTACTTGG	14	False	NA	NA	False	AAAACA	-44	NA	35377678	35377415	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_35377400_35377700
H1_mix_00040938	chr17	-	718	3	FSM	ENSG00000172123.13	ENST00000447040.6	751	3	33	0	-1	0	multi-exon	FALSE	canonical	1	1	junction_2	3.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCGGATTACCACCTTG	0	True	NA	NA	False	NA	NA	NA	35433166	35422682	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_35423069_35432187_35432258_35432904
H1_mix_00040940	chr17	-	550	2	FSM	ENSG00000277632.2	ENST00000614051.1	1494	2	872	72	837	-35	multi-exon	FALSE	canonical	0	0	junction_1	0	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATCGGATGCTTTTGTTC	3113	False	NA	-72	True	NA	NA	NA	36089297	36088327	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_36088763_36089182
H1_mix_00040944	chr17	-	383	2	NIC	ENSG00000277268.2	novel	490	3	NA	NA	2	1	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCGTGTGGCTGTTGTTT	6	True	NA	0	True	AATAAA	-22	NA	36936656	36861672	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_36861963_36936563
H1_mix_00040949	chr17	-	4057	21	NIC	ENSG00000275066.5	novel	8141	22	NA	NA	24	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_8	28.6134146861223	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGTTCTGCTTTTTATG	2598	False	NA	NA	False	AATAAA	-21	NA	37609357	37518460	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_37519072_37520178_37520215_37520537_37520649_37535978_37536128_37538323_37538421_37539191_37539246_37540379_37540544_37541971_37542431_37553114_37554060_37561194_37561258_37561470_37561590_37568790_37568925_37570636_37570886_37571790_37571988_37576340_37576419_37584647_37584760_37585324_37585431_37586418_37586550_37596222_37596345_37600362_37600404_37609278
H1_mix_00040950	chr17	-	4596	23	NIC	ENSG00000275066.5	novel	8141	22	NA	NA	22	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_8	29.036312403894	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGTTCTGCTTTTTATG	2596	False	NA	NA	False	AATAAA	-21	NA	37609359	37518460	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_37519072_37520178_37520215_37520537_37520649_37535978_37536128_37538323_37538421_37539191_37539246_37540379_37540544_37541971_37542431_37553114_37554060_37561194_37561258_37561470_37561590_37568790_37568925_37570636_37570886_37571790_37571988_37576340_37576419_37577379_37577614_37579131_37579435_37584647_37584760_37585324_37585431_37586418_37586550_37596222_37596345_37600362_37600404_37609278
H1_mix_00040951	chr17	-	6380	16	NNC	ENSG00000278053.5	novel	3123	16	NA	NA	0	75812	intron_retention	FALSE	non_canonical	0	0	junction_1	118.663932552772	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAAATGAAGTTTAG	109	False	NA	NA	False	NA	NA	NA	37643418	37533926	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_37533953_37609739_37614354_37618291_37618385_37619767_37619840_37620872_37620949_37621126_37621278_37621397_37621521_37624343_37624435_37625894_37626099_37626787_37626861_37628560_37628673_37630029_37630174_37632112_37632299_37633287_37633419_37642109_37642309_37643333
H1_mix_00040952	chr17	-	4980	13	NNC	ENSG00000274512.6	novel	3505	13	NA	NA	-1292	0	intron_retention	TRUE	canonical	2	5	junction_3	21.640368655722	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAGATTTTAGACAGAAA	NA	False	NA	NA	False	AATAAA	-19	NA	37990352	37978154	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_37979039_37980019_37980173_37980542_37980643_37981105_37981172_37981555_37981651_37982363_37982485_37983027_37983077_37984324_37984435_37984763_37984872_37985314_37985396_37985877_37986101_37987200_37987287_37987448
H1_mix_00040954	chr17	-	3389	25	Fusion	ENSG00000274611.4_ENSG00000274487.3	novel	2077	14	NA	NA	0	-3	multi-exon	FALSE	canonical	0	0	junction_1	133.447945531831	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTTAGATTTTAGACAG	193	False	NA	NA	False	AATAAA	-16	NA	38257152	38181661	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr17_-_38182543_38183523_38183677_38184046_38184147_38184609_38184676_38185059_38185155_38185867_38185989_38186531_38186581_38187833_38187944_38188272_38188381_38188823_38188905_38189386_38189427_38190709_38190796_38190957_38191031_38195879_38195941_38196366_38196472_38197545_38197711_38201104_38201220_38202071_38202106_38202237_38202335_38202780_38202982_38205634_38205743_38208994_38209117_38219045_38219124_38242200_38242286_38256897
H1_mix_00040955	chr17	-	680	3	FSM	ENSG00000276170.5	ENST00000688817.1	654	3	-25	-1	-20	1	multi-exon	FALSE	canonical	3	19	junction_2	0.5	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGGCTCAAAGAGAACAAG	1139	False	NA	NA	False	AATAAA	-34	NA	38452464	38450392	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_38450724_38451625_38451828_38452317
H1_mix_00040956	chr17	-	822	3	FSM	ENSG00000276170.5	ENST00000692656.1	850	3	28	0	6	0	multi-exon	FALSE	canonical	3	16	junction_2	13.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGGCTCAAAGAGAACAA	1706	False	NA	NA	False	AATAAA	-33	NA	38451897	38450393	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_38450724_38451305_38451526_38451625
H1_mix_00040957	chr17	-	2629	6	NIC	ENSG00000273559.5	novel	3067	10	NA	NA	0	6	intron_retention	FALSE	canonical	3	37	junction_5	28.5418990258182	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTGTGGAGTACCGTGT	NA	False	NA	-2	True	AATAAA	-36	NA	38810595	38800434	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_38802207_38802699_38802862_38806296_38806396_38806764_38806977_38809701_38809766_38810275
H1_mix_00040958	chr17	-	2779	3	FSM	ENSG00000125691.14	ENST00000584912.5	2779	3	0	0	0	0	multi-exon	FALSE	canonical	3	5280	junction_2	1084	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTGTTTGCAGTGCTTG	-10	True	NA	-25	True	AATAAA	-25	NA	38853740	38850080	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_38852733_38853021_38853106_38853697
H1_mix_00040959	chr17	-	333	4	FSM	ENSG00000125691.14	ENST00000470646.1	333	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3483.0811391959	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTTTATTTTGAAGAT	342	False	NA	-15	True	NA	NA	NA	38853424	38850421	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_38850476_38852603_38852733_38853021_38853106_38853358
H1_mix_00040960	chr17	-	409	4	FSM	ENSG00000125691.14	ENST00000378096.3	392	4	0	-17	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3483.0811391959	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTTTATTTTGAAGAT	137	False	NA	-15	True	NA	NA	NA	38853629	38850421	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_38850476_38852603_38852733_38853021_38853106_38853487
H1_mix_00040961	chr17	-	3360	3	ISM	ENSG00000067191.16	ENST00000539338.6	5308	12	14584	-1	-1029	1	3prime_fragment	FALSE	canonical	3	68	junction_2	8	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGCCTCCCAAGCCTGCT	NA	False	NA	-11	True	TATAAA	-21	NA	39179299	39173799	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_39175658_39177349_39177536_39177983
H1_mix_00040962	chr17	-	4706	12	FSM	ENSG00000067191.16	ENST00000539338.6	5308	12	603	-1	213	1	multi-exon	FALSE	canonical	1	2	junction_8	26.4603242672984	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGCCTCCCAAGCCTGCT	4570	False	NA	-11	True	TATAAA	-21	NA	39193280	39173799	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_39175658_39177349_39177536_39177983_39178080_39183712_39183865_39184030_39184141_39184324_39184384_39184783_39184865_39185130_39185151_39186495_39186573_39186792_39186930_39187478_39187602_39191473
H1_mix_00040963	chr17	-	3421	11	FSM	ENSG00000141750.7	ENST00000333461.6	3430	11	14	-5	14	5	multi-exon	FALSE	canonical	1	1	junction_10	1.62480768092719	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCTGTGTCTCTCACT	23	False	NA	0	True	ATTAAA	-20	NA	39225931	39210535	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_39212397_39212994_39213133_39213506_39213559_39214232_39214331_39214790_39214862_39214950_39215024_39215117_39215231_39216809_39216901_39217075_39217174_39217866_39218174_39225412
H1_mix_00040964	chr17	-	2220	4	FSM	ENSG00000161395.14	ENST00000579146.5	2220	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	66.0504857413378	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCCTTGTTCAGCTCAT	-19	True	NA	-2	True	AATAAA	-17	NA	39688057	39671121	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_39672867_39684596_39684750_39685921_39686020_39687833
H1_mix_00040965	chr17	-	825	3	FSM	ENSG00000141741.12	ENST00000469568.5	825	3	0	0	0	0	multi-exon	FALSE	canonical	3	594	junction_1	23.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAACTAGTGTGTGTTTT	41	False	NA	-6	True	AGTAAA	-20	NA	39730491	39729155	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_39729606_39729684_39729762_39730193
H1_mix_00040966	chr17	-	808	3	FSM	ENSG00000141741.12	ENST00000577810.1	806	3	0	-2	0	0	multi-exon	FALSE	canonical	3	592	junction_2	24.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAACTAGTGTGTGTTTT	-4	True	NA	-6	True	AGTAAA	-20	NA	39730510	39729155	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_39729762_39730193_39730292_39730406
H1_mix_00040967	chr17	-	1100	7	FSM	ENSG00000073605.19	ENST00000524039.5	1100	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	9.30352382463524	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAAAAGCCCTTTCTCCC	9661	False	NA	NA	False	NA	NA	NA	39917316	39904811	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_39904965_39905425_39905497_39905846_39905986_39906110_39906272_39909755_39909925_39912325_39912498_39917081
H1_mix_00040968	chr17	-	3496	26	NIC	ENSG00000008838.21	novel	3480	26	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	95	junction_25	41.4272181059747	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTGCTGTTGGTATT	11	True	NA	-6	True	AATAAA	-24	NA	40054395	40019096	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_40019646_40019784_40019934_40020272_40020354_40021954_40022055_40022393_40022485_40022644_40022827_40023130_40023396_40026155_40026332_40026646_40026747_40026855_40027035_40027382_40027466_40027908_40027947_40028825_40028969_40029747_40029860_40031158_40031246_40031537_40031621_40032042_40032091_40032648_40032763_40033055_40033207_40033344_40033457_40035116_40035350_40035721_40035796_40036115_40036155_40053297_40053381_40053468_40053658_40054360
H1_mix_00040969	chr17	-	3505	26	NIC	ENSG00000008838.21	novel	3480	26	NA	NA	12	-2	combination_of_known_junctions	FALSE	canonical	3	10	junction_13	62.6350189590456	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGTGTGTGCTGTTGGT	13	True	NA	-9	True	AATAAA	-21	NA	40054393	40019099	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_40019646_40019784_40019934_40020272_40020354_40021954_40022055_40022393_40022485_40022644_40022827_40023130_40023396_40026155_40026332_40026646_40026747_40026855_40027035_40027382_40027466_40027908_40027947_40028825_40029005_40029747_40029860_40031158_40031246_40031537_40031621_40032042_40032091_40032648_40032763_40033055_40033207_40033344_40033457_40035116_40035350_40035721_40035796_40036115_40036155_40053297_40053381_40053468_40053636_40054360
H1_mix_00040970	chr17	-	3604	26	NIC	ENSG00000008838.21	novel	3480	26	NA	NA	10	-2	combination_of_known_junctions	FALSE	canonical	3	6	junction_25	56.2633237553559	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGTGTGTGCTGTTGGT	11	True	NA	-9	True	AATAAA	-21	NA	40054395	40019099	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_40019646_40019784_40019934_40020272_40020354_40021954_40022055_40022393_40022485_40022644_40022827_40023130_40023396_40026155_40026332_40026646_40026747_40026855_40027035_40027382_40027466_40027908_40027947_40028825_40028969_40029747_40029860_40031158_40031246_40031537_40031621_40032042_40032091_40032648_40032763_40033055_40033207_40033344_40033457_40035116_40035350_40035721_40035796_40036115_40036155_40053297_40053381_40053468_40053769_40054360
H1_mix_00040973	chr17	-	2432	1	FSM	ENSG00000278918.1	ENST00000623156.1	2491	1	151	-92	151	92	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAGTTAGGAAGGAGTTAAC	NA	False	NA	NA	False	NA	NA	NA	40350388	40347956	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_40348000_40350400
H1_mix_00040974	chr17	-	5807	36	NNC	ENSG00000131747.15	novel	5695	35	NA	NA	-81	10779	intron_retention	TRUE	non_canonical	0	0	junction_1	251.874432596717	226	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAATTACCACATTGGTAA	NA	False	NA	NA	False	AAAAAG	-4	NA	40417977	40377745	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_40377777_40388524_40389648_40389964_40390165_40391505_40391641_40392067_40392112_40392217_40392342_40392584_40392738_40395448_40395540_40396282_40396466_40398557_40398642_40398772_40398938_40399039_40399132_40399871_40400068_40400208_40400410_40400528_40400664_40400849_40401082_40402905_40403055_40404151_40404274_40404376_40404492_40404790_40404884_40406383_40406494_40406583_40406690_40406831_40406943_40407548_40407675_40407966_40408125_40408491_40408631_40411108_40411247_40411353_40411456_40411644_40411819_40412758_40412972_40413194_40413293_40413479_40413626_40416004_40416069_40416421_40416513_40416739_40416896_40417770
H1_mix_00040975	chr17	-	256	1	FSM	ENSG00000240125.1	ENST00000491601.1	451	1	207	-12	207	12	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCCAATTCTAAATATATG	3860	False	NA	NA	False	NA	NA	NA	40439710	40439454	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_40439500_40439700
H1_mix_00040976	chr17	-	205	2	FSM	ENSG00000131746.13	ENST00000582747.1	599	2	0	394	0	34	multi-exon	FALSE	canonical	1	2	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGTCCTCAGGGAGCTC	9974	False	NA	NA	False	NA	NA	NA	40478648	40478197	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_40478334_40478579
H1_mix_00040977	chr17	-	238	3	FSM	ENSG00000131746.13	ENST00000497303.1	510	3	272	0	272	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAATAGTCCAAAGTGTT	9101	False	NA	NA	False	NA	NA	NA	40479740	40478231	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_40478334_40478579_40478649_40479673
H1_mix_00040982	chr17	-	2118	9	FSM	ENSG00000073584.20	ENST00000645104.1	2118	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	397.183816859398	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATCGTTTGAGACTATT	2	True	NA	NA	False	NA	NA	NA	40647832	40629622	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_40630925_40631591_40631694_40632194_40632368_40635930_40636103_40636394_40636527_40637491_40637573_40645575_40645620_40645795_40645848_40647772
H1_mix_00040983	chr17	-	603	3	NNC	ENSG00000186395.9	novel	2163	8	NA	NA	3530	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	43.5	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATCCCAATTTGTCAGAAT	-16	True	NA	-7	True	AATAAA	-19	NA	40819084	40818119	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_40818483_40818766_40818988_40819065
H1_mix_00040986	chr17	-	2792	9	FSM	ENSG00000141696.13	ENST00000355468.7	2791	9	0	-1	0	1	multi-exon	FALSE	canonical	0	0	junction_8	51.8067321880082	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCCGTGGTCGTCTCCCTG	6969	False	NA	-2	True	AATAAA	-25	NA	41812603	41801945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41802980_41803286_41803432_41806795_41806880_41807858_41808005_41809705_41809835_41810862_41811035_41811131_41811285_41811453_41812143_41812363
H1_mix_00040988	chr17	-	2138	10	FSM	ENSG00000168259.17	ENST00000674175.1	2124	10	0	-14	0	-5	multi-exon	FALSE	canonical	3	20	junction_1	236.119764547309	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGCTGCAATTTTATCT	11	True	NA	NA	False	NA	NA	NA	42017427	41986577	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41987695_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42017339
H1_mix_00040989	chr17	-	1124	8	FSM	ENSG00000168259.17	ENST00000674337.1	3295	8	0	2171	0	55	multi-exon	FALSE	canonical	3	567	junction_7	91.6630920762528	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCTCTTGATCTAGATC	-1	True	NA	NA	False	AAAACA	-43	NA	42017622	41988731	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42017339
H1_mix_00040992	chr17	-	3228	17	NIC	ENSG00000108773.11	novel	2990	18	NA	NA	33	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	46.289467957085	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTGTGATTGTTTCTT	20	True	NA	-10	True	AATAAA	-11	NA	42121334	42113118	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_42113843_42113999_42114085_42114218_42114283_42114489_42114605_42114891_42115036_42115722_42115834_42117034_42117162_42117387_42117597_42117677_42117815_42117906_42118018_42118296_42118404_42119053_42119437_42119536_42119719_42120029_42120120_42120224_42120371_42120705_42120830_42120965
H1_mix_00040999	chr17	-	1969	11	NIC	ENSG00000126581.13	novel	2112	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	206.290474816459	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGGGTGCACTGTTGGG	10	True	NA	-12	True	AATAAA	-25	NA	42824263	42810133	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_42810929_42813947_42814009_42814523_42814674_42815907_42816055_42818220_42818416_42818543_42818681_42818786_42818878_42819547_42819610_42820773_42820842_42823747_42823880_42824132
H1_mix_00041001	chr17	-	1455	6	FSM	ENSG00000267060.7	ENST00000424284.5	1446	6	-21	12	-21	3	multi-exon	FALSE	canonical	2	4	junction_5	18.4867520132661	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTCTTGAACTCATGGT	1606	False	NA	-10	True	AATAAA	-17	NA	42979685	42968099	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_42969187_42970288_42970343_42971606_42971697_42979169_42979269_42979377_42979445_42979627
H1_mix_00041017	chr17	-	3700	27	NNC	ENSG00000108840.16	novel	5326	27	NA	NA	40	0	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_19	125.767395893461	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGTGTGCCGTGTGGGTC	69	False	NA	35	True	ATTAAA	-22	NA	44123578	44078293	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_44078416_44078499_44078666_44078794_44078880_44079143_44079278_44080106_44080226_44080400_44080499_44080762_44080883_44082584_44082673_44082764_44082821_44083544_44083653_44083804_44083855_44084554_44084676_44085021_44085156_44086571_44086738_44087411_44087697_44088386_44088599_44091269_44091493_44091699_44091832_44092171_44092285_44092395_44092528_44092675_44092807_44093091_44093207_44093313_44093483_44093574_44093835_44110728_44110804_44117493_44117705_44123503
H1_mix_00041018	chr17	-	3740	27	NNC	ENSG00000108840.16	novel	5319	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_19	104.071699510738	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGTGTGCCGTGTGGGTC	-13	True	NA	35	True	ATTAAA	-22	NA	44123618	44078293	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_44078416_44078499_44078666_44078794_44078880_44079143_44079278_44080106_44080226_44080400_44080499_44080762_44080883_44082584_44082673_44082764_44082821_44083544_44083653_44083804_44083855_44084554_44084676_44085021_44085156_44086571_44086738_44087411_44087697_44088386_44088599_44091269_44091493_44091699_44091832_44092171_44092285_44092395_44092528_44092675_44092807_44093091_44093207_44093313_44093486_44093574_44093835_44110728_44110801_44117493_44117705_44123503
H1_mix_00041019	chr17	-	980	4	NIC	ENSG00000267080.7	novel	2249	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_2	0.816496580927726	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATAAATACAAGT	8876	False	NA	-32	True	ATTAAA	-12	NA	44186625	44175985	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_44176643_44181622_44181721_44182929_44183094_44186564
H1_mix_00041020	chr17	-	754	4	FSM	ENSG00000267080.7	ENST00000591166.1	754	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	12.657891697365	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAAATTTTTTTTTAT	8876	False	NA	NA	False	NA	NA	NA	44186625	44176208	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44176643_44181622_44181742_44182929_44183070_44186564
H1_mix_00041026	chr17	-	686	7	FSM	ENSG00000186566.13	ENST00000585614.1	686	7	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_6	44.2116123509047	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCTGGGATCTGAATTCT	3	True	NA	NA	False	GATAAA	-45	NA	44503391	44401336	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44401454_44405920_44406052_44424348_44424493_44435064_44435152_44436477_44436546_44464471_44464545_44503325
H1_mix_00041027	chr17	-	457	7	FSM	ENSG00000186566.13	ENST00000592746.5	457	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	61.899560221019	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGGTATTTAAACAAAGCT	-9	True	NA	NA	False	AAAAAG	-29	NA	44503403	44435068	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_44435152_44436477_44436546_44438670_44438716_44464471_44464545_44473724_44473760_44474828_44474904_44503325
H1_mix_00041029	chr17	-	4291	15	NNC	ENSG00000186185.14	novel	4217	15	NA	NA	33	0	intron_retention	FALSE	canonical	3	29	junction_3	42.3226793064129	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTGTGTCTCTCTGTA	-24	True	NA	-4	True	AATAAA	-15	NA	44947740	44924710	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_44926500_44926988_44927079_44928025_44928552_44928818_44929025_44931601_44931730_44932055_44932243_44932672_44932774_44932911_44932987_44933922_44934100_44934232_44934431_44934506_44934618_44934830_44934936_44935258_44935417_44936031_44936359_44947627
H1_mix_00041040	chr17	-	5404	4	NNC	ENSG00000214425.9	novel	5372	14	NA	NA	-5058	-3691	intron_retention	FALSE	canonical	3	62	junction_1	10.1980390271856	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATCGCTTGAGCCTGGGAG	NA	False	NA	NA	False	NA	NA	NA	45520214	45512002	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_45513290_45513867_45515526_45517177_45517283_45517860
H1_mix_00041041	chr17	-	3637	8	NNC	ENSG00000214425.9	novel	1397	7	NA	NA	-461	2321	intron_retention	FALSE	canonical	3	12	junction_3	22.7703710096776	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCACCAGTCCAACCTTAT	15	True	NA	NA	False	AATAAA	-20	NA	45585166	45516314	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_45517283_45517860_45519519_45521306_45521426_45539162_45539244_45539891_45539964_45542763_45542836_45545604_45545677_45584571
H1_mix_00041045	chr17	-	5353	14	NIC	ENSG00000120071.15	novel	5574	15	NA	NA	7	4	combination_of_known_junctions	FALSE	canonical	3	32	junction_6	23.4926653541863	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTACCAGGCCTTTCTTGA	-7	True	NA	-10	True	AATAAA	-21	NA	46193393	46029911	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_46031704_46032046_46032300_46033079_46033193_46033402_46033461_46034160_46034286_46038537_46038687_46039701_46039885_46050532_46050705_46066536_46066733_46067548_46067668_46082440_46082543_46094559_46094702_46170854_46172233_46192822
H1_mix_00041046	chr17	-	5309	15	FSM	ENSG00000120071.15	ENST00000262419.10	5309	15	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_14	25.2203554005611	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGGAAAAATTGAAAAAAA	4	True	NA	-54	True	NA	NA	NA	46192800	46029955	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_46031704_46032046_46032300_46033079_46033193_46033402_46033461_46034160_46034286_46038537_46038687_46039026_46039216_46039701_46039885_46050532_46050705_46066536_46066733_46067548_46067668_46082440_46082543_46094559_46094702_46170854_46172233_46192418
H1_mix_00041047	chr17	-	1493	1	FSM	ENSG00000120071.15	ENST00000574963.1	1493	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGCTCTGGACTCTTACC	2617	False	NA	NA	False	NA	NA	NA	46032566	46031073	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_46031100_46032600
H1_mix_00041059	chr17	-	1403	8	NIC	ENSG00000141295.14	novel	1496	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_1	106.408531190897	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCTTTATTTTCTCTTC	14	True	NA	-30	True	NA	NA	NA	47841261	47837706	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_47838003_47838335_47838451_47838530_47838697_47838790_47839007_47839443_47839644_47840190_47840373_47840669_47840844_47841207
H1_mix_00041078	chr17	-	513	2	NNC	ENSG00000214226.9	novel	2037	8	NA	NA	0	-2501	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTCTGGTAGGAATGAT	-12	True	NA	NA	False	AATAAA	-18	NA	56833920	56827247	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr17_-_56827458_56833617
H1_mix_00041084	chr17	-	4175	16	FSM	ENSG00000005379.17	ENST00000580669.6	4175	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	13.5341543264932	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCTATTTTCACAAAATCT	NA	False	NA	-21	True	AAAAAG	-18	NA	58312216	58301247	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_58302448_58304337_58304400_58305060_58305172_58305386_58305459_58305539_58305644_58305832_58305866_58306341_58306387_58306799_58306969_58307610_58307763_58307841_58307942_58308540_58309381_58309966_58310159_58310511_58310752_58310835_58311214_58311570_58311723_58311891
H1_mix_00041093	chr17	-	689	2	FSM	ENSG00000182628.13	ENST00000580541.1	689	2	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTTTGTAAATTAAAGTAT	9	True	NA	-3	True	CATAAA	-36	NA	59155184	59111885	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_59112346_59154955
H1_mix_00041095	chr17	-	2272	8	NIC	ENSG00000108423.15	novel	2491	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_7	28.1112948467192	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTAAATGTGTACTTAGT	-22	True	NA	-13	True	AATAAA	-27	NA	59892935	59859478	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_59860425_59863663_59863848_59866608_59866750_59874538_59874704_59878102_59878335_59880893_59881111_59886082_59886231_59892696
H1_mix_00041103	chr17	-	1342	5	FSM	ENSG00000136490.9	ENST00000584645.1	566	5	0	-776	0	0	multi-exon	FALSE	canonical	2	13	junction_4	506.591736509786	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTTCAATAGATCCAGAT	3	True	NA	-36	True	TTTAAA	-2	NA	63701172	63697832	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_63698712_63698798_63698939_63699027_63699070_63699256_63699349_63700983
H1_mix_00041104	chr17	-	2661	10	NIC	ENSG00000266173.7	novel	2166	13	NA	NA	5	0	intron_retention	TRUE	canonical	3	56	junction_8	41.2687667747791	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATTGTGTCTGCGTCAG	33	True	NA	-18	True	ATTAAA	-25	NA	63741777	63702831	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63726637_63726696_63728333_63728414_63741740
H1_mix_00041105	chr17	-	2992	10	NIC	ENSG00000266173.7	novel	1383	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	26	junction_1	51.8568780632727	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATTGTGTCTGCGTCAG	28	True	NA	-18	True	ATTAAA	-25	NA	63741782	63702831	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_63704909_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63726637_63726696_63728333_63728414_63741740
H1_mix_00041113	chr17	-	4051	1	FSM	ENSG00000178607.17	ENST00000606895.2	4717	1	652	14	-23	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGTTGGAAATATTTCCC	648	False	NA	NA	False	AATAAA	-3	NA	64130167	64126116	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_64126100_64130200
H1_mix_00041139	chr17	-	4176	15	FSM	ENSG00000125447.18	ENST00000621217.4	4181	15	5	0	1	0	multi-exon	FALSE	canonical	2	4	junction_10	89.4732031483877	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGAATCTTCCTAGTATA	-6	True	NA	-5	True	AATAAA	-16	NA	75261616	75236598	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75238390_75238651_75238763_75238913_75239084_75239374_75239572_75239788_75240109_75240341_75241058_75241399_75241517_75241614_75241697_75242335_75242474_75242830_75242912_75243446_75243571_75244618_75244718_75246508_75246585_75246711_75246797_75261547
H1_mix_00041140	chr17	-	4112	16	NIC	ENSG00000125447.18	novel	3871	17	NA	NA	0	-2	intron_retention	FALSE	canonical	3	232	junction_5	47.2277696088035	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTACTTGGAATCTTCCTA	20	True	NA	-10	True	AATAAA	-11	NA	75261590	75236603	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_75238763_75238913_75239084_75239374_75239572_75239788_75240109_75240341_75240413_75240811_75241058_75241399_75241517_75241614_75241697_75242335_75242474_75242830_75242912_75243062_75243167_75243446_75243571_75244618_75244718_75246508_75246585_75246711_75246797_75261547
H1_mix_00041144	chr17	-	3181	5	FSM	ENSG00000177885.15	ENST00000316615.9	3181	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	408.12337289109	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTATCTTTTTTTCCCC	-26	True	NA	-6	True	AATAAA	-19	NA	75405709	75318075	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_75320554_75321658_75321828_75332699_75332798_75393550_75393766_75405488
H1_mix_00041145	chr17	-	1837	7	NIC	ENSG00000108469.15	novel	3089	13	NA	NA	4	-5	combination_of_known_junctions	FALSE	canonical	3	17	junction_4	34.1158158174312	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGCCCTTTTCTCCAGG	9761	False	NA	-21	True	AATAAA	-31	NA	75630230	75626858	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_-_75627523_75627622_75627693_75628217_75628443_75628671_75628826_75628933_75629476_75629707_75629843_75630183
H1_mix_00041147	chr17	-	1385	10	Fusion	ENSG00000092929.12_ENSG00000204316.13	novel	1358	9	NA	NA	0	-342	multi-exon	FALSE	non_canonical	0	0	junction_1	343.198930902821	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATGCGGCTGGGAGGAGG	13	True	NA	NA	False	NA	NA	NA	75904884	75841135	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr17_-_75841162_75898642_75898987_75899157_75899295_75899515_75899675_75900981_75901028_75901200_75901274_75901711_75901921_75902019_75902155_75904539_75904720_75904808
H1_mix_00041179	chr17	-	624	2	ISM	ENSG00000167291.16	ENST00000310924.7	10960	12	12	80709	12	-62481	5prime_fragment	FALSE	canonical	3	164	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTGCTTTATTTAATTT	12	False	NA	0	True	AATAAA	-17	NA	80035860	80013051	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr17_-_80013610_80035794
H1_mix_00041194	chr17	-	3654	8	FSM	ENSG00000185624.16	ENST00000680559.1	3654	8	0	0	0	0	multi-exon	FALSE	canonical	3	2201	junction_2	135.030608774909	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACAGCACGGCCTGTGGC	9434	False	NA	NA	False	NA	NA	NA	81860520	81843330	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr17_-_81844093_81845143_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180
H1_mix_00041211	chr17	+	1553	1	Intergenic	novelGene_538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCTCAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	4233783	4235336	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_4233800_4235300
H1_mix_00041212	chr17	+	265	1	Intergenic	novelGene_541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAAAAAAAAAAAAAAG	5564	False	NA	NA	False	NA	NA	NA	12003173	12003438	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_12003200_12003400
H1_mix_00041213	chr17	+	1438	1	NIC	ENSG00000196712.19	novel	5082	13	NA	NA	4030	-675	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGCTGAGATTGTCCAG	9218	False	NA	NA	False	NA	NA	NA	31347037	31348475	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr17_+_31347000_31348500
H1_mix_00041214	chr17	+	644	1	Intergenic	novelGene_552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCCCAGACTTCAATCTG	NA	False	NA	NA	False	NA	NA	NA	34186464	34187108	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_34186500_34187100
H1_mix_00041215	chr17	+	306	1	Intergenic	novelGene_558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAAGGACTCTTAATTCT	NA	False	NA	NA	False	NA	NA	NA	39057272	39057578	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_39057300_39057600
H1_mix_00041216	chr17	+	276	1	Intergenic	novelGene_560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGTCTCAAAGAAAAAAAAAA	7632	False	NA	NA	False	NA	NA	NA	40465274	40465550	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_+_40465300_40465600
H1_mix_00041223	chr17_GL000205v2_random	-	1012	3	Intergenic	novelGene_586	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	38	junction_1	9.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCTTTTCATGACTGC	NA	False	NA	NA	False	ATTAAA	-17	NA	140733	137352	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_GL000205v2_random_-_138169_138267_138303_140572
H1_mix_00041224	chr17_GL000205v2_random	-	1002	3	Intergenic	novelGene_587	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	38	junction_1	2.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCTTTTCATGACTGC	NA	False	NA	NA	False	ATTAAA	-17	NA	140734	137352	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_GL000205v2_random_-_138169_138267_138292_140572
H1_mix_00041225	chr17_GL000205v2_random	-	2652	2	Intergenic	novelGene_584	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	41	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTTCTTGACATAGCAGCC	NA	False	NA	NA	False	NA	NA	NA	140705	135649	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_GL000205v2_random_-_138169_140572
H1_mix_00041228	chr17_GL000205v2_random	-	3792	4	Intergenic	novelGene_582	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	19.5675468285856	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCTAGTACTGTGAGATT	NA	False	NA	NA	False	AATAAA	-16	NA	140731	111480	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_GL000205v2_random_-_114924_136473_136572_138199_138292_140572
H1_mix_00041229	chr17_GL000205v2_random	-	715	4	Intergenic	novelGene_583	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	18.006171781426	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGCCTCATGCATTTG	NA	False	NA	NA	False	AATAAA	-17	NA	140680	129220	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_GL000205v2_random_-_129627_136473_136572_138199_138303_140572
H1_mix_00041231	chr17_GL000205v2_random	-	1025	2	Intergenic	novelGene_585	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	43	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCTTTTCATGACTGC	NA	False	NA	NA	False	ATTAAA	-17	NA	140658	137352	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_GL000205v2_random_-_138292_140572
H1_mix_00041232	chr17_GL000205v2_random	-	909	3	Intergenic	novelGene_588	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	41	junction_1	8	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCTGCTTTTCATGACT	NA	False	NA	NA	False	ATTAAA	-15	NA	140722	137354	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr17_GL000205v2_random_-_138011_138199_138303_140572
H1_mix_00041233	chr18	+	1617	3	ISM	ENSG00000263006.7	ENST00000576266.6	2646	5	4952	486	208	-365	3prime_fragment	FALSE	canonical	3	9	junction_2	13.5	872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGCACCAATATAAAAAGGA	7745	False	NA	NA	False	TATAAA	-21	NA	117049	121854	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr18_+_117305_118296_118505_120700
H1_mix_00041234	chr18	+	5430	15	FSM	ENSG00000101557.15	ENST00000582707.5	1803	15	-28	-3599	-28	361	multi-exon	FALSE	canonical	3	24	junction_3	148.981182896173	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAAGTTTTATTAACCAC	20	False	NA	NA	False	NA	NA	NA	158354	214990	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_158715_163307_163454_166786_166820_180235_180340_192841_192901_196636_196768_197615_197697_198046_198133_199201_199317_202879_202946_203097_203191_204563_204693_209970_210032_210385_210494_211132
H1_mix_00041235	chr18	+	4993	16	FSM	ENSG00000101557.15	ENST00000261601.8	4972	16	-21	0	0	0	multi-exon	FALSE	canonical	3	513	junction_3	53.2413373235496	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGTCTCATTGTCATT	-19	True	NA	10	True	AATAAA	-22	NA	158535	214629	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_158715_163307_163454_166786_166820_178932_179038_180235_180340_192841_192901_196636_196768_197615_197697_198046_198133_199201_199317_202879_202946_203097_203191_204563_204693_209970_210032_210385_210494_211132
H1_mix_00041236	chr18	+	2184	1	FSM	ENSG00000263884.1	ENST00000581677.1	2131	1	33	-86	33	86	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTGGAACACAACTAAGAC	3	True	NA	NA	False	NA	NA	NA	268180	270364	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_268200_270400
H1_mix_00041237	chr18	+	1327	6	FSM	ENSG00000176890.16	ENST00000323224.7	1327	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	260.788496678822	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTGCATTCGTCCACGC	5	False	NA	10	True	AATAAA	-5	NA	657742	673484	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_657948_659640_659715_662145_662321_670691_670868_671379_671452_672859
H1_mix_00041238	chr18	+	1613	7	FSM	ENSG00000176890.16	ENST00000323274.15	1613	7	0	0	0	0	multi-exon	FALSE	canonical	3	589	junction_3	49.5210392998101	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGCTGTATTCTGGTTT	-31	True	NA	104	True	ATTAAA	-19	NA	657652	673578	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_657948_659640_659715_662145_662321_669071_669174_670691_670868_671379_671452_672859
H1_mix_00041239	chr18	+	2149	17	FSM	ENSG00000080986.13	ENST00000261597.9	2126	17	-23	0	-23	0	multi-exon	FALSE	canonical	3	304	junction_3	34.6517834137004	145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTCTCATTTCTTA	-16	True	NA	NA	False	AATAAA	-20	NA	2571533	2616635	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_2571684_2572976_2573087_2574988_2575067_2577745_2577870_2577968_2578142_2578926_2579030_2585112_2585203_2587829_2587924_2589203_2589311_2590017_2590163_2595415_2595622_2599018_2599172_2601395_2601486_2606414_2606508_2608699_2608831_2610758_2610862_2616436
H1_mix_00041240	chr18	+	8833	48	FSM	ENSG00000101596.17	ENST00000320876.11	8833	48	0	0	0	0	multi-exon	TRUE	canonical	3	49	junction_1	25.2102790765623	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTCATCAGTTTTCATGTG	12	True	NA	27	True	AATAAA	-28	NA	2655725	2805017	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_2656262_2666156_2666233_2666869_2667032_2673280_2673364_2674014_2674146_2688393_2688509_2688627_2688748_2694526_2694694_2697031_2697123_2697830_2698042_2700538_2700660_2700734_2700919_2703691_2703887_2705693_2705808_2706363_2706471_2707562_2707646_2707806_2707921_2718157_2718236_2718314_2718435_2722518_2722664_2724898_2724996_2726451_2726525_2728456_2728597_2729274_2729410_2732264_2732493_2738396_2738546_2739431_2739521_2740702_2740822_2743760_2743929_2747521_2747648_2750042_2750123_2750349_2750508_2751277_2751394_2752487_2752553_2760651_2760740_2762104_2762237_2763636_2763790_2769693_2769821_2769988_2770109_2771532_2771619_2772249_2772373_2775733_2775925_2777805_2777916_2778168_2778240_2784449_2784622_2795948_2796108_2796406_2796522_2802527
H1_mix_00041241	chr18	+	729	5	FSM	ENSG00000101596.17	ENST00000581631.1	729	5	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_3	3.53553390593274	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAATGAAAGGAGGAAAAAC	NA	False	NA	14	True	TTTAAA	-5	NA	2728413	2739465	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_2728597_2729274_2729410_2732264_2732493_2738396_2738546_2739431
H1_mix_00041242	chr18	+	738	4	ISM	ENSG00000101596.17	ENST00000583344.2	1124	6	0	1978	0	-1978	5prime_fragment	FALSE	canonical	3	116	junction_2	10.6562449087639	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTTACAATGGTAAGTT	NA	False	NA	NA	False	NA	NA	NA	2760400	2769807	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr18_+_2760740_2762104_2762237_2763636_2763790_2769693
H1_mix_00041243	chr18	+	784	1	FSM	ENSG00000207034.1	ENST00000384307.1	117	1	-701	34	-701	-34	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCTTCTTACTAGTCTAC	3139	False	NA	NA	False	NA	NA	NA	2778239	2779023	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_2778200_2779000
H1_mix_00041244	chr18	+	5682	8	FSM	ENSG00000132205.11	ENST00000254528.4	5944	8	0	262	0	-262	multi-exon	FALSE	canonical	3	12	junction_3	13.2541868625637	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAACTCCTGAGCTCAGCCA	4	True	NA	NA	False	NA	NA	NA	2847005	2915741	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_2847323_2847808_2847932_2884963_2885140_2890560_2892487_2906782_2907086_2908942_2908976_2909690_2909820_2913066
H1_mix_00041246	chr18	+	963	4	FSM	ENSG00000101608.13	ENST00000579226.5	947	4	-16	0	-16	0	multi-exon	FALSE	canonical	3	92	junction_1	1713.49979736082	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAAATACTTACTTGTTT	-11	True	NA	5	True	ATTAAA	-7	NA	3247464	3256227	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_3247588_3253232_3253429_3253888_3254051_3255745
H1_mix_00041247	chr18	+	958	4	FSM	ENSG00000101608.13	ENST00000217652.8	958	4	0	0	0	0	multi-exon	FALSE	canonical	3	3449	junction_1	180.691880159446	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACTTGTTTAAACTTCTT	-21	True	NA	14	True	ATTAAA	-16	NA	3247800	3256236	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_3247910_3253232_3253429_3253888_3254051_3255745
H1_mix_00041249	chr18	+	1289	4	FSM	ENSG00000118680.14	ENST00000237500.10	1163	4	-46	-80	-46	80	multi-exon	FALSE	canonical	3	2087	junction_2	84.2588603979163	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTCTGAGAAGAGGCAAAA	191	False	NA	NA	False	ATTAAA	-17	NA	3262086	3278541	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_3262238_3272883_3273083_3277252_3277415_3277764
H1_mix_00041250	chr18	+	1025	4	FSM	ENSG00000118680.14	ENST00000400175.9	1025	4	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	979.424661046814	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGCAAGTTAAACAAATGAT	36	False	NA	39	True	AATAAA	-28	NA	3262612	3278284	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_3262757_3272883_3273083_3277252_3277415_3277764
H1_mix_00041251	chr18	+	3030	3	FSM	ENSG00000177426.22	ENST00000618001.4	3030	3	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	837	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTATTTGTGTTTTTGAA	19	False	NA	NA	False	AATATA	-23	NA	3447608	3459978	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_3447798_3456353_3456581_3457364
H1_mix_00041253	chr18	+	2344	4	NNC	ENSG00000177426.22	novel	1585	4	NA	NA	-150	0	intron_retention	FALSE	canonical	3	184	junction_1	660.461623075524	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGAATCTAGTTGGTTGA	468	False	NA	11	True	AATAAA	-23	NA	3449262	3458349	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_+_3450071_3450181_3450506_3456353_3456581_3457364
H1_mix_00041255	chr18	+	1585	4	FSM	ENSG00000177426.22	ENST00000407501.6	1585	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	732.837559687608	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGAATCTAGTTGGTTGA	39	False	NA	11	True	AATAAA	-23	NA	3449881	3458349	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_3450071_3450321_3450506_3456353_3456581_3457364
H1_mix_00041256	chr18	+	3175	3	FSM	ENSG00000177426.22	ENST00000343820.10	3175	3	0	0	0	0	multi-exon	FALSE	canonical	3	1310	junction_1	221.5	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTATTTGTGTTTTTGAA	-3	True	NA	NA	False	AATATA	-23	NA	3450171	3459978	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_3450506_3456353_3456581_3457364
H1_mix_00041259	chr18	+	6104	2	FSM	ENSG00000177426.22	ENST00000472042.1	2214	2	-3952	62	-131	0	multi-exon	FALSE	canonical	3	1753	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGAATCTAGTTGGTTGA	676	False	NA	11	True	AATAAA	-23	NA	3451461	3458349	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_3456581_3457364
H1_mix_00041260	chr18	+	1420	3	FSM	ENSG00000177426.22	ENST00000345133.9	1088	3	-106	-226	-29	0	multi-exon	FALSE	canonical	3	28	junction_1	862.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGAATCTAGTTGGTTGA	778	False	NA	11	True	AATAAA	-23	NA	3451563	3458349	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_3451772_3456353_3456581_3457364
H1_mix_00041261	chr18	+	2002	3	FSM	ENSG00000177426.22	ENST00000330513.10	1980	3	-84	62	0	0	multi-exon	FALSE	canonical	3	99	junction_1	827	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGAATCTAGTTGGTTGA	-5	True	NA	11	True	AATAAA	-23	NA	3451592	3458349	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_3452383_3456353_3456581_3457364
H1_mix_00041262	chr18	+	1352	3	FSM	ENSG00000177426.22	ENST00000400167.6	1352	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	876.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTGTTGTAATTCAGA	1630	False	NA	68	True	AATAAA	-12	NA	3453773	3458406	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_3453857_3456353_3456581_3457364
H1_mix_00041263	chr18	+	603	1	FSM	ENSG00000266373.1	ENST00000577490.1	586	1	-34	17	-34	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCACCATCCCCTCAGGTGT	NA	False	NA	NA	False	NA	NA	NA	3580134	3580737	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_3580100_3580700
H1_mix_00041264	chr18	+	1146	3	FSM	ENSG00000177337.9	ENST00000317114.3	1979	3	-147	980	-116	0	multi-exon	FALSE	canonical	3	29	junction_2	3	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGACTCTGAGACTGTG	NA	False	NA	8	True	AATAAA	-14	NA	3593953	3597372	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_3594241_3594419_3594485_3596578
H1_mix_00041265	chr18	+	400	3	FSM	ENSG00000177337.9	ENST00000576606.6	398	3	-9	7	2	0	multi-exon	FALSE	canonical	3	14	junction_2	10.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGACTCTGAGACTGTG	11	True	NA	8	True	AATAAA	-14	NA	3594102	3597372	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_3594241_3594419_3594485_3597175
H1_mix_00041266	chr18	+	2261	2	FSM	ENSG00000262001.2	ENST00000572856.1	2261	2	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGCTCACACTGGGGAT	-2	True	NA	NA	False	NA	NA	NA	3603737	3608336	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_3604216_3606553
H1_mix_00041267	chr18	+	805	3	FSM	ENSG00000262001.2	ENST00000692104.1	803	3	-11	9	-11	0	multi-exon	FALSE	canonical	3	179	junction_2	117.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATCTCATCGCTGTTCTC	62	False	NA	8	True	AATAAA	-28	NA	3603916	3610094	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_3604216_3606553_3606698_3609732
H1_mix_00041268	chr18	+	748	3	FSM	ENSG00000262001.2	ENST00000687483.1	736	3	-12	0	-11	0	multi-exon	FALSE	canonical	3	66	junction_2	174	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATCTCATCGCTGTTCTC	62	False	NA	8	True	AATAAA	-28	NA	3603916	3610094	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_3604216_3606553_3606641_3609732
H1_mix_00041269	chr18	+	5758	2	FSM	ENSG00000263753.9	ENST00000665272.1	5740	2	-18	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAACATTGCCCTTTGC	NA	False	NA	0	True	ATTAAA	-5	NA	5237825	5245181	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_5239050_5240647
H1_mix_00041270	chr18	+	4461	3	FSM	ENSG00000263753.9	ENST00000657250.1	4461	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	0.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCAGTTTCAGCTACCTC	-39	True	NA	NA	False	NA	NA	NA	5238061	5246875	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_5239050_5241698_5241890_5243593
H1_mix_00041271	chr18	+	6188	3	FSM	ENSG00000263753.9	ENST00000670993.1	6188	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	24	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAGGTACTCAAAACTCA	57	False	NA	3	True	ATTAAA	-22	NA	5238157	5246492	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_5241256_5241698_5241890_5243593
H1_mix_00041272	chr18	+	2235	17	NIC	ENSG00000088756.13	novel	5858	18	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_16	31.6325954317694	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACTGCAGAGAGACTCAAA	164	False	NA	15	True	AATAAA	-17	NA	6729902	6898721	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_+_6729944_6824761_6824965_6837196_6837415_6851033_6851127_6859807_6859898_6868149_6868235_6870589_6870733_6873408_6873575_6873683_6873776_6876130_6876209_6882136_6882300_6887156_6887240_6889887_6890086_6890429_6890544_6894834_6894892_6896501_6896627_6898435
H1_mix_00041273	chr18	+	5858	18	FSM	ENSG00000088756.13	ENST00000383472.9	5858	18	0	0	0	0	multi-exon	TRUE	canonical	3	124	junction_16	11.7435103185579	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTATGAGAATTCTTCT	3	True	NA	NA	False	AATAAA	-18	NA	6729715	6915716	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_6729944_6824761_6824965_6837196_6837415_6851033_6851127_6859807_6859898_6868149_6868235_6870589_6870733_6873408_6873575_6873683_6873776_6876130_6876209_6882136_6882300_6887156_6887240_6889887_6890086_6890429_6890544_6894834_6894892_6896501_6896627_6908959_6909025_6912059
H1_mix_00041274	chr18	+	6095	31	FSM	ENSG00000173482.17	ENST00000332175.12	6095	31	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_17	9.77098880473324	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGACAATCATTTTTC	NA	False	NA	16	True	ATTAAA	-21	NA	7566781	8406861	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_7567892_7774148_7774272_7888105_7888378_7906504_7906584_7926567_7926684_7949180_7949356_7955120_7955415_8069685_8069995_8076454_8076565_8085670_8085873_8088748_8088852_8113485_8113760_8114790_8114828_8143646_8143780_8244057_8244210_8247844_8247920_8253226_8253415_8296367_8296456_8314780_8314858_8319177_8319215_8343422_8343521_8370889_8371007_8376045_8376201_8376461_8376598_8378264_8378415_8379166_8379341_8380295_8380428_8384560_8384687_8387071_8387236_8394475_8394612_8406108
H1_mix_00041275	chr18	+	2156	6	FSM	ENSG00000206418.5	ENST00000649141.2	2147	6	-9	0	-9	0	multi-exon	FALSE	canonical	3	24	junction_2	5.23832034148352	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGTTGCCATATTTATT	-19	True	NA	NA	False	AATAAA	-21	NA	8609427	8639383	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_8609954_8624937_8624999_8633188_8633328_8635532_8635623_8636252_8636358_8638148
H1_mix_00041276	chr18	+	449	2	FSM	ENSG00000206418.5	ENST00000580987.1	504	2	55	0	55	0	multi-exon	FALSE	canonical	3	28	junction_1	0	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAGTTGGACTGTGAAA	6991	False	NA	NA	False	TTTAAA	-45	NA	8632913	8635567	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_8633328_8635532
H1_mix_00041277	chr18	+	7292	14	NIC	ENSG00000168502.17	novel	5718	14	NA	NA	-441	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_5	16.1072588289333	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGTCTCGGTCTCTCATT	NA	False	NA	9	True	AATAAA	-18	NA	8705219	8832778	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_+_8706714_8718423_8718649_8720337_8720497_8777832_8777893_8783529_8784844_8785935_8786092_8796231_8796463_8798096_8798292_8806892_8807061_8812978_8813234_8818962_8819260_8821466_8821499_8824698_8826233_8831606
H1_mix_00041278	chr18	+	5185	9	NIC	ENSG00000168502.17	novel	6093	17	NA	NA	117	0	intron_retention	FALSE	canonical	3	48	junction_1	12.1340172655226	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGTCTCGGTCTCTCATT	638	False	NA	9	True	AATAAA	-18	NA	8784790	8832778	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_+_8786092_8796231_8796463_8798096_8798292_8806892_8807061_8812978_8813234_8818962_8819260_8821466_8821499_8824698_8826233_8831606
H1_mix_00041279	chr18	+	492	1	FSM	ENSG00000272788.1	ENST00000609424.1	650	1	5	153	5	-153	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGTGGAGGAGTTGCCT	NA	False	NA	NA	False	AGTAAA	-20	NA	8801660	8802152	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_8801700_8802200
H1_mix_00041281	chr18	+	1056	2	FSM	ENSG00000178127.13	ENST00000497577.2	868	2	-106	-82	-41	82	multi-exon	FALSE	canonical	3	19	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCCTCATATTACAGATAA	2525	False	NA	NA	False	NA	NA	NA	9102588	9103938	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_9102798_9103091
H1_mix_00041282	chr18	+	861	8	FSM	ENSG00000178127.13	ENST00000318388.11	857	8	-4	0	0	0	multi-exon	FALSE	canonical	3	3513	junction_2	236.182565151691	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATTTGTTTATTCTGCTC	-18	True	NA	24	True	AATAAA	-25	NA	9102694	9134341	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_9102798_9117837_9117904_9119325_9119389_9119473_9119591_9122512_9122682_9124873_9124984_9126830_9126908_9134185
H1_mix_00041284	chr18	+	1372	9	FSM	ENSG00000101745.17	ENST00000540578.6	1338	9	-11	-23	-2	23	multi-exon	FALSE	canonical	3	7	junction_8	31.1729049015327	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTGAGAAATATGTGTTT	-16	True	NA	39	True	AATAAA	-36	NA	9136793	9235843	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_9136966_9182381_9182520_9195550_9195699_9204475_9204545_9208656_9208804_9211583_9211785_9216757_9216901_9221851_9222000_9235637
H1_mix_00041285	chr18	+	9060	12	NIC	ENSG00000101745.17	novel	11284	13	NA	NA	-3	83	combination_of_known_junctions	FALSE	canonical	3	33	junction_9	19.5096924417981	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAAAAGAAACAGCCTTTG	-17	True	NA	NA	False	NA	NA	NA	9136792	9283842	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_+_9136966_9182381_9182520_9195550_9195699_9208656_9208804_9211583_9211785_9216757_9216901_9221851_9222000_9254210_9258932_9263789_9263889_9275523_9275668_9279548_9279645_9280940
H1_mix_00041286	chr18	+	11134	13	FSM	ENSG00000101745.17	ENST00000262126.9	11284	13	7	143	7	-143	multi-exon	FALSE	canonical	3	25	junction_3	23.001660568074	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTGCACCTAACAGTAAT	-22	True	NA	NA	False	NA	NA	NA	9136787	9285842	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_9136966_9182381_9182520_9195550_9195699_9204475_9204545_9208656_9208804_9211583_9211785_9216757_9216901_9221851_9222000_9254210_9258932_9263789_9263889_9275523_9275668_9279548_9279645_9280940
H1_mix_00041287	chr18	+	7315	9	ISM	ENSG00000101745.17	ENST00000262126.9	11284	13	44	25595	-14	4279	5prime_fragment	FALSE	canonical	3	25	junction_3	24.225180597882	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCAGAGTCAGTTTGTTT	15	True	NA	8	True	AATAAA	-20	NA	9136824	9260390	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr18_+_9136966_9182381_9182520_9195550_9195699_9204475_9204545_9208656_9208804_9211583_9211785_9216757_9216901_9221851_9222000_9254210
H1_mix_00041288	chr18	+	7283	8	NIC	ENSG00000101745.17	novel	11284	13	NA	NA	7	4279	combination_of_known_junctions	FALSE	canonical	3	58	junction_7	11.8648855959121	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCAGAGTCAGTTTGTTT	-22	True	NA	8	True	AATAAA	-20	NA	9136787	9260390	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_+_9136966_9182381_9182520_9195550_9195699_9208656_9208804_9211583_9211785_9216757_9216901_9221851_9222000_9254210
H1_mix_00041290	chr18	+	6279	1	FSM	ENSG00000273284.1	ENST00000609701.1	1003	1	-5271	-5	-5271	5	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTCAGTTTGTTTTTCCT	NA	False	NA	13	True	AATAAA	-25	NA	9254116	9260395	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_9254100_9260400
H1_mix_00041291	chr18	+	3750	5	FSM	ENSG00000128791.12	ENST00000262120.10	3750	5	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_4	25.810608284192	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTCATATTTTTTGTTA	4	True	NA	10	True	AATAAA	-13	NA	9334772	9402420	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_9334921_9337192_9337353_9359971_9360072_9396279_9396547_9399345
H1_mix_00041292	chr18	+	4379	10	FSM	ENSG00000017797.13	ENST00000383432.8	4379	10	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_9	21.5240319321749	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGACTTCTCTGTTTTG	-22	True	NA	40	True	ATTAAA	-28	NA	9475512	9538114	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_9475692_9512990_9513290_9516844_9517304_9522159_9522510_9524593_9524756_9525719_9525852_9530833_9530942_9533334_9533457_9533702_9533827_9535670
H1_mix_00041294	chr18	+	4045	6	FSM	ENSG00000168461.13	ENST00000578734.5	783	6	-175	-3087	-175	5	multi-exon	FALSE	canonical	3	18	junction_1	123.865087898084	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTTTCTTATTACACT	NA	False	NA	26	True	AATAAA	-20	NA	9708099	9862556	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_9708445_9792153_9792236_9814019_9814092_9815115_9815223_9845581_9845692_9859227
H1_mix_00041295	chr18	+	3919	7	FSM	ENSG00000168461.13	ENST00000578921.6	3919	7	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_6	21.505167337694	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTTTGTCTTTTTCTTATT	20	True	NA	21	True	AATAAA	-15	NA	9708300	9862551	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_9708445_9775277_9775358_9792153_9792236_9814019_9814092_9815115_9815223_9845581_9845692_9859227
H1_mix_00041296	chr18	+	6801	6	FSM	ENSG00000101558.14	ENST00000400000.7	6801	6	0	0	0	0	multi-exon	FALSE	canonical	3	1356	junction_4	66.9525204902698	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTGGGTGCTTTTGTG	-20	True	NA	NA	False	AATAAA	-14	NA	9914015	9960021	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_9914336_9931809_9931963_9936109_9936214_9936985_9937067_9950394_9950569_9954052
H1_mix_00041297	chr18	+	1237	7	FSM	ENSG00000101558.14	ENST00000340541.4	1227	7	-10	0	0	0	multi-exon	FALSE	canonical	3	78	junction_4	655.293996784819	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTACGGTTAGAAAACACAA	16	True	NA	NA	False	NA	NA	NA	9914051	9954358	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_9914336_9931809_9931963_9936109_9936214_9936985_9937067_9944923_9945059_9950394_9950569_9954052
H1_mix_00041298	chr18	+	1152	3	FSM	ENSG00000101558.14	ENST00000583475.1	939	3	-213	0	-213	0	multi-exon	FALSE	canonical	3	1356	junction_1	92.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAATTGTTCTTTCTTTGT	9024	False	NA	-13	True	CATAAA	-3	NA	9936513	9954477	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_9937067_9950394_9950569_9954052
H1_mix_00041299	chr18	+	3760	1	FSM	ENSG00000101558.14	ENST00000577539.1	3760	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAGAAAAAAATCGAT	NA	False	NA	NA	False	NA	NA	NA	9947593	9951353	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_9947600_9951400
H1_mix_00041300	chr18	+	3363	5	FSM	ENSG00000154856.13	ENST00000355285.10	3803	5	0	440	0	-440	multi-exon	FALSE	canonical	3	16	junction_1	5.02493781056044	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACACTGTGAAATGCTGTC	12	True	NA	NA	False	NA	NA	NA	10454634	10489509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_10455040_10468468_10468653_10471529_10472062_10485461_10485784_10487589
H1_mix_00041301	chr18	+	3486	8	FSM	ENSG00000134265.13	ENST00000580483.5	1516	8	-10	-1960	-10	0	multi-exon	TRUE	canonical	3	15	junction_1	84.2086815050344	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAATTGTTCTTTGTA	-6	True	NA	NA	False	AATAAA	-15	NA	10525894	10552761	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_10526159_10539761_10539872_10539987_10540055_10540328_10540400_10546325_10546405_10548298_10548379_10548966_10549097_10550076
H1_mix_00041302	chr18	+	3556	12	FSM	ENSG00000134265.13	ENST00000322897.11	3559	12	0	3	0	0	multi-exon	FALSE	canonical	3	192	junction_3	23.9669193502314	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAATTGTTCTTTGTA	-1	True	NA	NA	False	AATAAA	-15	NA	10526026	10552761	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_10526159_10530769_10530838_10532710_10532796_10533535_10533554_10534465_10534497_10539761_10539872_10539987_10540055_10540328_10540400_10546325_10546405_10548298_10548379_10548966_10549097_10550076
H1_mix_00041304	chr18	+	3860	7	FSM	ENSG00000134265.13	ENST00000583367.1	3860	7	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_4	11.6428327977153	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAATTGTTCTTTGTA	8905	False	NA	NA	False	AATAAA	-15	NA	10539123	10552761	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_10539872_10539987_10540055_10540328_10540400_10546325_10546405_10548298_10548379_10548966_10549097_10550076
H1_mix_00041305	chr18	+	6227	12	FSM	ENSG00000141404.17	ENST00000334049.11	6227	12	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	15.4170668550546	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGTTGTTTCTGTTCCT	-15	True	NA	23	True	AATAAA	-23	NA	11689263	11885685	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_11689940_11752852_11752926_11753627_11753683_11753825_11753946_11824917_11825016_11862394_11862450_11864532_11864607_11867167_11867227_11868542_11868664_11872267_11872399_11876620_11876689_11880988
H1_mix_00041307	chr18	+	6532	12	FSM	ENSG00000141404.17	ENST00000423027.8	6045	12	-487	0	90	0	multi-exon	FALSE	canonical	3	34	junction_1	22.6879660096028	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGTTGTTTCTGTTCCT	21	True	NA	23	True	AATAAA	-23	NA	11751597	11885685	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_11752579_11752852_11752926_11753627_11753683_11753825_11753946_11824917_11825016_11862394_11862450_11864532_11864607_11867167_11867227_11868542_11868664_11872267_11872399_11876620_11876689_11880988
H1_mix_00041308	chr18	+	3055	1	FSM	ENSG00000255112.3	ENST00000526991.3	3032	1	-23	0	-23	0	mono-exon	FALSE	NA	NA	NA	NA	NA	252	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTGGATGTGAGTGTG	-3	True	NA	9	True	ATTAAA	-16	NA	11851389	11854444	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_11851400_11854400
H1_mix_00041309	chr18	+	575	1	FSM	ENSG00000273141.1	ENST00000609611.1	512	1	-121	58	-121	-58	mono-exon	FALSE	NA	NA	NA	NA	NA	474	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTGATGAATAAAGGAGA	130	False	NA	NA	False	NA	NA	NA	11908590	11909165	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_11908600_11909200
H1_mix_00041310	chr18	+	927	8	FSM	ENSG00000141401.12	ENST00000589238.5	923	8	-4	0	-4	0	multi-exon	FALSE	canonical	3	22	junction_1	341.215354823529	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGGCCCTCGTGGCCCAC	7	True	NA	NA	False	NA	NA	NA	11981032	12030516	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_11981131_11999053_11999188_12009882_12009988_12012169_12012216_12014264_12014374_12028042_12028152_12028841_12028994_12030342
H1_mix_00041311	chr18	+	1636	8	FSM	ENSG00000141401.12	ENST00000590107.5	1616	8	-20	0	17	0	multi-exon	FALSE	canonical	3	9	junction_4	349.41052400538	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATGGCCCTGTGTGTAT	419	False	NA	22	True	AATAAA	-5	NA	11981444	12030868	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_11981766_11999053_11999188_12009882_12009988_12012169_12012350_12014264_12014374_12028042_12028152_12028841_12028994_12030342
H1_mix_00041312	chr18	+	1449	8	FSM	ENSG00000141401.12	ENST00000269159.8	1449	8	0	0	0	0	multi-exon	FALSE	canonical	3	906	junction_4	47.4956496396657	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTATCTGTTTCCT	-5	True	NA	31	True	AATAAA	-14	NA	11981506	12030877	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_11981766_11999053_11999188_12009882_12009988_12012169_12012216_12014264_12014374_12028042_12028152_12028841_12028994_12030342
H1_mix_00041314	chr18	+	919	2	FSM	ENSG00000141401.12	ENST00000589374.1	919	2	0	0	0	0	multi-exon	FALSE	canonical	3	1039	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGTGTATCTGTTTC	NA	False	NA	29	True	AATAAA	-12	NA	12028607	12030875	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_12028994_12030342
H1_mix_00041315	chr18	+	524	5	FSM	ENSG00000176014.13	ENST00000590693.5	524	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	298.453828087361	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTCCAGCTCACGCACT	426	False	NA	NA	False	NA	NA	NA	12307668	12325181	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_12307770_12308261_12308350_12308686_12308796_12310942_12311054_12325066
H1_mix_00041316	chr18	+	1739	3	FSM	ENSG00000176014.13	ENST00000587204.1	408	3	-171	-1160	-159	1160	multi-exon	FALSE	canonical	3	640	junction_2	58.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTGTTTTTTAAAA	1	True	NA	NA	False	AATAAA	-18	NA	12308072	12312295	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_12308350_12308686_12308796_12310942
H1_mix_00041317	chr18	+	4349	3	FSM	ENSG00000176014.13	ENST00000590103.5	1075	3	-2625	-649	-2062	0	multi-exon	FALSE	canonical	3	37	junction_2	360	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCATCTCTCTAGCCATG	NA	False	NA	8	True	AATAAA	-15	NA	12305606	12326563	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_12308350_12308686_12308796_12325066
H1_mix_00041318	chr18	+	3644	4	FSM	ENSG00000176014.13	ENST00000591909.5	1017	4	-2627	0	-2062	0	multi-exon	FALSE	canonical	3	55	junction_3	307.086307086461	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTATTCAGAAATATTAAT	NA	False	NA	15	True	ATTAAA	-18	NA	12305606	12329826	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_12308350_12308686_12308796_12310942_12311054_12329145
H1_mix_00041319	chr18	+	2172	3	FSM	ENSG00000176014.13	ENST00000417736.2	2163	3	-9	0	0	0	multi-exon	FALSE	canonical	3	640	junction_1	4.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCATCTCTCTAGCCATG	160	False	NA	8	True	AATAAA	-15	NA	12308231	12326563	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_12308796_12310942_12311054_12325066
H1_mix_00041320	chr18	+	1985	4	FSM	ENSG00000176014.13	ENST00000317702.10	1879	4	-159	53	-150	0	multi-exon	FALSE	canonical	3	640	junction_2	53.160135440008	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCATCTCTCTAGCCATG	10	True	NA	8	True	AATAAA	-15	NA	12308081	12326563	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_12308350_12308686_12308796_12310942_12311054_12325066
H1_mix_00041321	chr18	+	1699	7	FSM	ENSG00000141391.14	ENST00000440960.6	1684	7	-15	0	-15	0	multi-exon	FALSE	canonical	2	12	junction_6	9.67815409397198	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAACCGTTTCGTGTCTGTC	-26	True	NA	NA	False	ATTAAA	-22	NA	12407913	12432234	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_12408008_12420324_12420494_12421539_12421630_12427040_12427112_12427220_12427324_12429349_12429437_12431149
H1_mix_00041323	chr18	+	1627	6	FSM	ENSG00000141391.14	ENST00000592149.5	2001	6	374	0	290	0	multi-exon	FALSE	canonical	2	12	junction_5	8.82269800004511	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTTTCGTGTCTGTCTTTT	202	False	NA	NA	False	ATTAAA	-26	NA	12420306	12432238	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_12420494_12421539_12421630_12427040_12427112_12427220_12427324_12429349_12429437_12431149
H1_mix_00041324	chr18	+	416	2	FSM	ENSG00000128789.21	ENST00000400514.2	471	2	-17	72	-17	-72	multi-exon	FALSE	canonical	3	29	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCCCAAAAGCTAAACCAGC	17	False	NA	NA	False	NA	NA	NA	12658175	12658821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_12658344_12658573
H1_mix_00041325	chr18	+	524	3	NIC	ENSG00000128789.21	novel	377	3	NA	NA	-17	142	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	3.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATTGCTTAAAAATGGA	17	False	NA	-42	True	NA	NA	NA	12658175	12663613	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_+_12658344_12658573_12658774_12663457
H1_mix_00041328	chr18	+	1051	5	FSM	ENSG00000128789.21	ENST00000586587.1	711	5	-258	-82	-255	0	multi-exon	FALSE	canonical	2	10	junction_3	221.696160318577	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTCTTAAATGTATTTT	1107	False	NA	26	True	AATAAA	-19	NA	12702767	12725740	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_12703165_12706549_12706722_12712701_12712761_12724498_12724620_12725438
H1_mix_00041329	chr18	+	1036	6	FSM	ENSG00000128789.21	ENST00000590217.5	1036	6	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_5	21.3410402745508	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGTTAGATTAATTATGC	-13	True	NA	NA	False	AAAAAG	-33	NA	12703022	12724868	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_12703165_12706549_12706722_12712701_12712761_12718516_12718636_12720509_12720684_12724498
H1_mix_00041330	chr18	+	1089	7	FSM	ENSG00000128789.21	ENST00000317615.11	1070	7	-19	0	0	0	multi-exon	FALSE	canonical	3	472	junction_5	19.5930826795808	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTCTTAAATGTATTTT	-13	True	NA	26	True	AATAAA	-19	NA	12703022	12725740	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_12703165_12706549_12706722_12712701_12712761_12718516_12718636_12720509_12720684_12724498_12724620_12725438
H1_mix_00041331	chr18	+	794	2	FSM	ENSG00000128789.21	ENST00000588824.1	794	2	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTCTTAAATGTATTTT	3566	False	NA	26	True	AATAAA	-19	NA	12724127	12725740	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_12724620_12725438
H1_mix_00041332	chr18	+	3637	9	FSM	ENSG00000085415.16	ENST00000262124.15	3494	9	-10	-133	-10	133	multi-exon	FALSE	canonical	3	694	junction_6	63.944189532748	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAATCTCTTGCCTTATAAA	-3	True	NA	NA	False	AATAAA	-18	NA	12947984	12987669	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_12948233_12951854_12951906_12955462_12955610_12963159_12963372_12971152_12971252_12978751_12978893_12982517_12982676_12984039_12984191_12985239
H1_mix_00041333	chr18	+	1851	9	FSM	ENSG00000085415.16	ENST00000399892.7	1851	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	263.264956840063	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAATGTGGACTTTTTGGT	-19	True	NA	22	True	AATAAA	-27	NA	12948010	12987531	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_12948233_12951854_12951906_12955462_12955610_12963159_12963372_12971152_12971252_12978751_12978893_12982517_12982676_12984039_12984191_12986861
H1_mix_00041335	chr18	+	5177	4	FSM	ENSG00000085415.16	ENST00000590843.1	5206	4	29	0	29	0	multi-exon	FALSE	canonical	3	694	junction_1	44.6392950959876	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAATGTGGACTTTTTGGT	NA	False	NA	22	True	AATAAA	-27	NA	12976316	12987531	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_12978893_12982517_12982676_12984039_12984191_12985239
H1_mix_00041336	chr18	+	7978	45	NIC	ENSG00000101639.19	novel	7960	45	NA	NA	-56	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_13	16.7167086206417	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGATTATGATATTCTGAA	17	False	NA	-28	True	NA	NA	NA	12991305	13124995	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_+_12991438_12999420_12999589_13001456_13001583_13008455_13008632_13012972_13013026_13015327_13015449_13017187_13017337_13018479_13018616_13019081_13019207_13029662_13030003_13030464_13030609_13037236_13037302_13038369_13038580_13040829_13040957_13042203_13042335_13048858_13049682_13049764_13049892_13052918_13053091_13055779_13056699_13057584_13057734_13059081_13059313_13067830_13067957_13068093_13068238_13068358_13068423_13068851_13068992_13069088_13069182_13069737_13069857_13071038_13071213_13072754_13072846_13073008_13073186_13087016_13087278_13087530_13087647_13089455_13089566_13092376_13092528_13095502_13095682_13096183_13096308_13099475_13099582_13100304_13100513_13103508_13103589_13104983_13105080_13113585_13113706_13114129_13114252_13116373_13116504_13117584_13117644_13124631
H1_mix_00041337	chr18	+	7960	45	FSM	ENSG00000101639.19	ENST00000506447.5	7960	45	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_13	16.778746764142	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGTATATCCAGAAATTT	-6	True	NA	13	True	AATAAA	-18	NA	12991361	13125036	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_12991438_12999420_12999589_13001456_13001583_13008455_13008632_13012972_13013026_13015327_13015449_13017187_13017337_13018479_13018616_13019081_13019207_13029662_13030003_13030464_13030609_13037236_13037302_13038369_13038580_13040829_13040957_13042203_13042335_13048858_13049682_13049764_13049892_13052918_13053091_13055779_13056699_13057584_13057734_13059081_13059313_13067830_13067957_13068093_13068238_13068358_13068423_13068851_13068992_13069088_13069182_13069737_13069857_13071038_13071213_13072754_13072846_13073008_13073186_13087016_13087278_13087530_13087647_13089455_13089566_13092376_13092528_13095502_13095682_13096183_13096308_13099475_13099582_13100304_13100513_13103508_13103589_13104983_13105080_13113585_13113706_13114129_13114252_13116376_13116504_13117584_13117644_13124631
H1_mix_00041338	chr18	+	7764	44	FSM	ENSG00000101639.19	ENST00000325971.12	7764	44	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_12	17.4214454168141	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTCAGTGAGCTTGT	-6	True	NA	27	True	AATAAA	-32	NA	12991361	13125050	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_12991438_12999420_12999589_13001456_13001583_13008455_13008632_13012972_13013026_13015327_13015449_13017187_13017337_13018479_13018616_13019081_13019207_13029662_13030003_13030464_13030609_13037236_13037302_13040829_13040957_13042203_13042335_13048858_13049682_13049764_13049892_13052918_13053091_13055779_13056699_13057584_13057734_13059081_13059313_13067830_13067957_13068093_13068238_13068358_13068423_13068851_13068992_13069088_13069182_13069737_13069857_13071038_13071213_13072754_13072846_13073008_13073186_13087016_13087278_13087530_13087647_13089455_13089566_13092376_13092528_13095502_13095682_13096183_13096308_13099475_13099582_13100304_13100513_13103508_13103589_13104983_13105080_13113585_13113706_13114129_13114252_13116376_13116504_13117584_13117644_13124631
H1_mix_00041339	chr18	+	7709	44	NNC	ENSG00000101639.19	novel	7764	44	NA	NA	20	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	18.7620666058064	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCAGTGAGCTTGTCTT	29	False	NA	30	True	AATAAA	-35	NA	12991396	13125053	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_+_12991438_12999420_12999589_13001456_13001583_13008455_13008632_13012998_13013026_13015327_13015449_13017187_13017337_13018479_13018616_13019081_13019207_13029662_13030003_13030464_13030609_13037236_13037302_13040829_13040957_13042203_13042335_13048858_13049682_13049764_13049892_13052918_13053091_13055779_13056699_13057584_13057734_13059081_13059313_13067830_13067957_13068093_13068238_13068358_13068423_13068851_13068992_13069088_13069182_13069737_13069857_13071038_13071213_13072754_13072846_13073008_13073186_13087016_13087278_13087530_13087647_13089455_13089566_13092376_13092528_13095502_13095682_13096183_13096308_13099475_13099582_13100304_13100513_13103508_13103589_13104983_13105080_13113585_13113706_13114129_13114252_13116373_13116504_13117584_13117644_13124631
H1_mix_00041340	chr18	+	1266	10	FSM	ENSG00000101639.19	ENST00000507254.6	1266	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	17.9078574381385	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTAAAATAAATGAACAGAAA	NA	False	NA	NA	False	NA	NA	NA	13068414	13092527	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_13068423_13068851_13068992_13069088_13069182_13069737_13069857_13072754_13072846_13073008_13073186_13087016_13087278_13087530_13087647_13089455_13089566_13092376
H1_mix_00041341	chr18	+	6150	11	FSM	ENSG00000101654.18	ENST00000543302.6	1849	11	-31	-4270	-31	0	multi-exon	FALSE	canonical	3	82	junction_1	26.0785352349399	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTGTTTGGTTCATTTA	46	False	NA	28	True	AATAAA	-19	NA	13726628	13764555	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_13726730_13731475_13731935_13734463_13734600_13737009_13737136_13740166_13740280_13741509_13741692_13742487_13742653_13746219_13746338_13752325_13752428_13754113_13754148_13759941
H1_mix_00041342	chr18	+	4138	12	FSM	ENSG00000101654.18	ENST00000592764.5	4108	12	-31	1	0	0	multi-exon	FALSE	canonical	3	35	junction_11	43.2400564215502	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTGTTTGGTTCATTTA	-10	True	NA	28	True	AATAAA	-19	NA	13726672	13764555	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_13726730_13730626_13730756_13731475_13731935_13734463_13734600_13737009_13737136_13740166_13740280_13741509_13741692_13742487_13742653_13746219_13746338_13752325_13752428_13754113_13754148_13762038
H1_mix_00041343	chr18	+	6249	12	FSM	ENSG00000101654.18	ENST00000383314.7	6236	12	-13	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	33.7607038428843	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGTTTGGTTCATTTAC	-23	True	NA	29	True	AATAAA	-20	NA	13726659	13764556	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_13726730_13730626_13730756_13731475_13731935_13734463_13734600_13737009_13737136_13740166_13740280_13741509_13741692_13742487_13742653_13746219_13746338_13752325_13752428_13754113_13754148_13759941
H1_mix_00041344	chr18	+	1319	1	FSM	ENSG00000176136.6	ENST00000324750.5	1319	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCCTAAGAGGCTCTCTC	NA	False	NA	NA	False	NA	NA	NA	13825543	13826862	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_13825500_13826900
H1_mix_00041345	chr18	+	323	1	FSM	ENSG00000279352.1	ENST00000624346.1	375	1	-114	166	-15	-166	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACAGACGCGGCAACCAT	NA	False	NA	NA	False	AATGAA	-25	NA	14010038	14010361	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_14010000_14010400
H1_mix_00041347	chr18	+	1328	1	FSM	ENSG00000267150.1	ENST00000591211.1	1085	1	-81	-162	-81	162	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAATGGATAAATTTTTT	NA	False	NA	NA	False	NA	NA	NA	14089853	14091181	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_14089900_14091200
H1_mix_00041348	chr18	+	249	1	FSM	ENSG00000266145.1	ENST00000582468.1	324	1	2	73	2	-73	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAACAAGCATTCTATTG	3643	False	NA	NA	False	AAGAAA	-38	NA	14222009	14222258	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_14222000_14222300
H1_mix_00041349	chr18	+	466	3	FSM	ENSG00000141449.16	ENST00000581327.1	682	3	0	216	0	-216	multi-exon	FALSE	canonical	2	5	junction_1	1	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATGTCATCTCAGACCAA	9305	False	NA	NA	False	NA	NA	NA	21449634	21452217	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_21449837_21451022_21451152_21452082
H1_mix_00041350	chr18	+	740	3	FSM	ENSG00000167088.11	ENST00000582475.1	723	3	-17	0	0	0	multi-exon	FALSE	canonical	3	213	junction_1	2381.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAATAGGCTCAGAGGCT	-12	True	NA	NA	False	NA	NA	NA	21612313	21629479	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_21612444_21623747_21623940_21629061
H1_mix_00041351	chr18	+	4858	4	FSM	ENSG00000167088.11	ENST00000300413.10	4858	4	0	0	0	0	multi-exon	FALSE	canonical	3	4976	junction_3	306.235566553303	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCGTTTTTTTTTCTTTT	-12	True	NA	4	True	AATAAA	-14	NA	21612313	21633520	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_21612444_21622724_21622802_21623747_21623940_21629061
H1_mix_00041352	chr18	+	10111	21	FSM	ENSG00000101752.12	ENST00000261537.7	10100	21	-11	0	-11	0	multi-exon	FALSE	canonical	3	49	junction_1	10.4206525707366	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTTATATTTTTCATC	-12	True	NA	7	True	AATAAA	-15	NA	21740780	21870953	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_21741813_21765771_21765944_21768622_21768753_21773623_21773729_21778102_21778170_21779480_21779686_21791373_21791558_21798083_21798229_21799840_21799975_21803906_21804015_21815615_21815814_21819494_21819647_21838364_21838498_21843130_21843218_21844091_21844254_21846943_21847126_21849195_21849389_21853139_21853219_21857129_21857244_21858545_21858647_21864525
H1_mix_00041353	chr18	+	279	1	FSM	ENSG00000199977.1	ENST00000363107.1	205	1	5	-79	5	79	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATATGACTTTACTGAGA	NA	False	NA	NA	False	NA	NA	NA	21817628	21817907	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_21817600_21817900
H1_mix_00041354	chr18	+	3624	7	FSM	ENSG00000141448.11	ENST00000269216.10	3624	7	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_1	41.3860550856874	194	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCCTGAGTGTACAGTAT	0	True	NA	31	True	AATACA	-22	NA	22169588	22202528	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_22169683_22171107_22172280_22176954_22177122_22181452_22181579_22182756_22182845_22182939_22183044_22200655
H1_mix_00041355	chr18	+	3283	19	FSM	ENSG00000101773.19	ENST00000327155.10	3275	19	-8	0	-8	0	multi-exon	FALSE	canonical	3	209	junction_1	32.7157605391396	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGTAGTCTGTGATTTG	-11	True	NA	15	True	AATACA	-16	NA	22933319	23026486	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_22933565_22936753_22936961_22946443_22946487_22949617_22949714_22968805_22968919_22975152_22975220_22982217_22982394_22984885_22984991_22989220_22989319_22990936_22991050_22992747_22993640_22993720_22993848_22996373_22996463_22997619_22997735_23001585_23001730_23006362_23006433_23016827_23016925_23022128_23022271_23026142
H1_mix_00041356	chr18	+	3307	19	FSM	ENSG00000101773.19	ENST00000399722.6	3293	19	-14	0	-14	0	multi-exon	FALSE	canonical	3	57	junction_1	56.3875478767747	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTAGTCTGTGATTTGTT	383	False	NA	17	True	AATACA	-18	NA	22933811	23026488	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_22934079_22936753_22936961_22946443_22946487_22949617_22949714_22968805_22968919_22975152_22975220_22982217_22982394_22984885_22984991_22989220_22989319_22990936_22991050_22992747_22993640_22993720_22993848_22996373_22996463_22997619_22997735_23001585_23001730_23006362_23006433_23016827_23016925_23022128_23022271_23026142
H1_mix_00041357	chr18	+	3333	19	NIC	ENSG00000101773.19	novel	3293	19	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_1	57.1646960031784	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAATTTTGAAAATACAAT	-12	True	NA	-4	True	NA	NA	NA	22933845	23026467	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_+_22934160_22936753_22936961_22946443_22946487_22949617_22949714_22968805_22968919_22975152_22975220_22982217_22982394_22984885_22984991_22989220_22989319_22990936_22991050_22992747_22993640_22993720_22993848_22996373_22996463_22997619_22997735_23001585_23001730_23006362_23006433_23016827_23016925_23022128_23022271_23026142
H1_mix_00041358	chr18	+	5283	10	FSM	ENSG00000134508.13	ENST00000256925.12	5283	10	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_5	13.7436854187255	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGAGTTCTTTATCTC	-1	True	NA	16	True	AATAAA	-17	NA	23135484	23260470	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_23136608_23188837_23188910_23194447_23194541_23213976_23214055_23234607_23234705_23235894_23236052_23237141_23237246_23252959_23253067_23253728_23253937_23257226
H1_mix_00041359	chr18	+	3594	13	FSM	ENSG00000101782.15	ENST00000339486.8	3574	13	-20	0	-20	0	multi-exon	TRUE	canonical	3	82	junction_5	14.1074743782625	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTGTGTGGTATCTTC	27	False	NA	19	True	ATTAAA	-21	NA	23453266	23483140	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_23453503_23462963_23463080_23463966_23464113_23464205_23464314_23464518_23464629_23466132_23466277_23467398_23467527_23473428_23473627_23474947_23475108_23477005_23477087_23477178_23477269_23479316_23479425_23481171
H1_mix_00041361	chr18	+	2199	20	FSM	ENSG00000141452.10	ENST00000269221.8	2200	20	-43	44	-2	0	multi-exon	FALSE	non_canonical	3	88	junction_3	11.9833679753749	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGTTATAAAGTGTATC	NA	False	NA	NA	False	AATAAA	-15	NA	23503467	23531778	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_23503721_23504370_23504448_23506969_23507055_23507984_23508042_23509192_23509280_23515855_23515997_23516319_23516424_23518889_23518980_23519068_23519175_23520201_23520314_23524129_23524175_23524428_23524483_23526636_23526766_23527794_23527902_23529178_23529299_23529634_23529713_23530027_23530133_23530228_23530298_23530386_23530613_23531624
H1_mix_00041362	chr18	+	2018	20	NIC	ENSG00000141452.10	novel	2200	20	NA	NA	5	0	combination_of_known_junctions	FALSE	non_canonical	3	13	junction_18	24.5014556636925	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGTTATAAAGTGTATC	15	True	NA	NA	False	AATAAA	-15	NA	23503524	23531778	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_+_23503721_23504370_23504448_23506969_23507055_23507984_23508042_23509192_23509280_23515855_23515997_23516319_23516424_23518889_23518980_23519068_23519175_23520201_23520314_23524129_23524175_23524428_23524483_23526636_23526766_23527794_23527902_23529178_23529299_23529634_23529713_23530027_23530133_23530228_23530298_23530510_23530613_23531624
H1_mix_00041363	chr18	+	675	5	FSM	ENSG00000141452.10	ENST00000593081.5	675	5	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_3	8.26135582092915	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTATAAAGTGTATCTACA	5512	False	NA	NA	False	AATAAA	-19	NA	23529595	23531782	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_23529713_23530027_23530133_23530228_23530298_23530386_23530613_23531624
H1_mix_00041365	chr18	+	1443	2	FSM	ENSG00000168234.13	ENST00000584250.1	1048	2	-398	3	-398	0	multi-exon	FALSE	canonical	3	164	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTGGCTTGAGATTCCT	NA	False	NA	3	True	ATTAAA	-15	NA	24014021	24020285	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_24015039_24019859
H1_mix_00041366	chr18	+	4896	14	FSM	ENSG00000168234.13	ENST00000317571.8	4896	14	0	0	0	0	multi-exon	TRUE	canonical	3	66	junction_8	8.44473856714674	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCATCTATGTGTGCTTC	-21	True	NA	14	True	AAGAAA	-22	NA	24014753	24135600	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_24015039_24064139_24064189_24066011_24066141_24069156_24069272_24080584_24080940_24082912_24083082_24114553_24114648_24118124_24118233_24123833_24123944_24125426_24125551_24128885_24128984_24130312_24130418_24131881_24131921_24132484
H1_mix_00041367	chr18	+	499	4	FSM	ENSG00000168234.13	ENST00000578150.1	499	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	38.0555150040335	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTTTGGATATGGCCTT	138	False	NA	NA	False	NA	NA	NA	24014912	24080779	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_24015039_24064139_24064189_24066011_24066141_24080584
H1_mix_00041368	chr18	+	1395	6	FSM	ENSG00000154040.21	ENST00000399496.8	1305	6	-93	3	-18	0	multi-exon	FALSE	canonical	3	55	junction_5	10.0717426496113	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAATTTTGTATTGCTTT	-11	True	NA	23	True	AATAAA	-13	NA	24138968	24161597	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_24139119_24143090_24143260_24143359_24143414_24155700_24156043_24159471_24160070_24161515
H1_mix_00041369	chr18	+	1109	4	FSM	ENSG00000154040.21	ENST00000327201.10	1109	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	25.6645020732269	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAATTTTGTATTGCTTT	16	False	NA	23	True	AATAAA	-13	NA	24139031	24161597	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_24139119_24155700_24156043_24159471_24160070_24161515
H1_mix_00041370	chr18	+	830	6	FSM	ENSG00000154040.21	ENST00000415309.6	824	6	-6	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	30.0466304267217	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTTTGTATTGCTTTTT	0	True	NA	25	True	AATAAA	-15	NA	24139061	24161599	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_24139119_24143090_24143260_24143359_24143414_24155700_24156043_24159945_24160070_24161515
H1_mix_00041371	chr18	+	2226	6	FSM	ENSG00000154040.21	ENST00000621648.4	2226	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	17.0105849399719	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAATTTTGTATTGCTTT	33	False	NA	23	True	AATAAA	-13	NA	24139094	24161597	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_24139119_24143090_24143260_24143359_24143414_24155700_24157000_24159471_24160070_24161515
H1_mix_00041372	chr18	+	586	1	FSM	ENSG00000273321.1	ENST00000608010.1	562	1	-25	1	-25	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTAACCTGAGTGTTTTT	4794	False	NA	NA	False	AATAAA	-17	NA	24402127	24402713	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_24402100_24402700
H1_mix_00041373	chr18	+	3203	12	FSM	ENSG00000154059.11	ENST00000648078.1	3203	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_11	88.8536730057434	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTCTTCTATGGCTTAA	NA	False	NA	10	True	NA	NA	NA	24426633	24453510	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_24426793_24427918_24428048_24428868_24428922_24430321_24430385_24437954_24438041_24440495_24440619_24443048_24443153_24445392_24445467_24448092_24448184_24449818_24449954_24450778_24450815_24451360
H1_mix_00041374	chr18	+	3746	11	FSM	ENSG00000154059.11	ENST00000284202.9	3734	11	-12	0	11	0	multi-exon	FALSE	canonical	3	271	junction_5	24.0590939147758	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTATGACTGCATTGTA	-9	True	NA	31	True	AATAAA	-20	NA	24426657	24453531	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_24426793_24427918_24428048_24428868_24428922_24430321_24430385_24437954_24438041_24440495_24440619_24443048_24443153_24445392_24445467_24448092_24448184_24449818_24449954_24450778
H1_mix_00041375	chr18	+	4751	15	FSM	ENSG00000141384.13	ENST00000269142.10	4751	15	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_9	6.1145527311522	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTTGCTCATTCACTGA	5	True	NA	NA	False	ATTAAA	-22	NA	26226444	26391685	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_26227277_26265169_26265316_26267515_26267624_26274662_26274825_26274930_26275054_26281970_26282061_26285881_26286500_26292245_26292382_26293425_26293532_26315228_26315399_26321069_26321201_26327014_26327141_26335174_26335232_26357689_26357795_26389844
H1_mix_00041376	chr18	+	747	1	FSM	ENSG00000263846.1	ENST00000584883.1	931	1	-35	219	-35	-219	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGAAAAAGAGGAAGGCCT	49	False	NA	NA	False	NA	NA	NA	26599372	26600119	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_26599400_26600100
H1_mix_00041377	chr18	+	1390	7	FSM	ENSG00000046604.14	ENST00000683654.1	948	7	-442	0	-375	0	multi-exon	FALSE	canonical	2	9	junction_6	274.886643303502	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTATCATGTGTTTCTTT	NA	False	NA	7	True	AATAAA	-17	NA	31497801	31522608	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_31498297_31518238_31518275_31519802_31519938_31520802_31520965_31521098_31521244_31522082_31522250_31522358
H1_mix_00041378	chr18	+	5697	15	FSM	ENSG00000046604.14	ENST00000261590.13	5697	15	0	0	0	0	multi-exon	FALSE	canonical	3	567	junction_11	68.8616255209515	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCGGGGTACTTGGCAT	-35	True	NA	26	True	AATAAA	-29	NA	31498176	31549008	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_31498297_31518238_31518275_31519802_31519938_31520802_31520965_31521098_31521244_31522082_31522250_31524447_31524586_31524702_31524889_31530986_31531253_31535269_31535413_31536201_31536430_31538750_31538979_31541192_31541315_31542519_31542853_31545720
H1_mix_00041379	chr18	+	3171	1	FSM	ENSG00000259985.1	ENST00000565978.1	1169	1	-829	-1173	-829	1173	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAATAGTGTATAGAAT	-1	True	NA	28	True	AATAAA	-41	NA	31684825	31687996	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_31684800_31688000
H1_mix_00041380	chr18	+	1582	1	FSM	ENSG00000263823.1	ENST00000580420.1	1582	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCAATGTCTCAAATTTTT	NA	False	NA	5	True	ATTAAA	-15	NA	31942574	31944156	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_31942600_31944200
H1_mix_00041381	chr18	+	5922	6	FSM	ENSG00000101695.9	ENST00000217740.4	5573	6	-376	27	-376	-27	multi-exon	FALSE	canonical	3	26	junction_5	14.0370937162933	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACTGTGTCTATTCTTAA	NA	False	NA	18	True	AATAAA	-32	NA	32018448	32073192	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_32019028_32037115_32037270_32042178_32042274_32045641_32045733_32065901_32066010_32068297
H1_mix_00041383	chr18	+	3551	8	FSM	ENSG00000134758.14	ENST00000261593.8	3551	8	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_1	76.3653944492383	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGTGTCTAATTAAAAT	-16	True	NA	10	True	ATTAAA	-16	NA	32091873	32131561	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_32092236_32092699_32092887_32111753_32111920_32113744_32113861_32123517_32123575_32124733_32124846_32126692_32126801_32129118
H1_mix_00041384	chr18	+	2917	5	FSM	ENSG00000134758.14	ENST00000257190.9	2071	5	0	-846	0	0	multi-exon	FALSE	canonical	3	69	junction_1	223.449518907515	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGTGTCTAATTAAAAT	9	True	NA	10	True	ATTAAA	-16	NA	32092689	32131561	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_32092887_32123517_32123575_32124733_32124846_32126692_32126801_32129118
H1_mix_00041386	chr18	+	275	1	FSM	ENSG00000260389.1	ENST00000562560.1	1931	1	1812	-156	1812	156	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCACATTAAAGAGGGTAT	NA	False	NA	NA	False	NA	NA	NA	32513671	32513946	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_32513700_32513900
H1_mix_00041387	chr18	+	6092	21	NIC	ENSG00000134769.23	novel	5888	22	NA	NA	0	66	combination_of_known_junctions	FALSE	canonical	3	33	junction_20	22.5150505218176	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTGAAAGAAGGAAGGCAG	-2	True	NA	81	True	NA	NA	NA	34493330	34891464	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_+_34493515_34679467_34679593_34755975_34756044_34765960_34766042_34794036_34794251_34806218_34806305_34811958_34812114_34815908_34816015_34818163_34818331_34820790_34820916_34827592_34827677_34848295_34848384_34851830_34851929_34858284_34858399_34863965_34864063_34875238_34875399_34877718_34877809_34879550_34879720_34882068_34882202_34884727_34884777_34887765
H1_mix_00041388	chr18	+	1695	12	NIC	ENSG00000134769.23	novel	1706	13	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_11	19.7027497346801	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTCTCTGAGTGGGCCT	-14	True	NA	13	True	AATAAA	-20	NA	34493318	34829328	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_+_34493515_34679467_34679593_34755975_34756044_34765960_34766042_34794036_34794251_34806218_34806305_34811958_34812114_34815908_34816015_34818163_34818331_34820790_34820916_34827592_34827677_34829040
H1_mix_00041389	chr18	+	3018	16	NIC	ENSG00000134769.23	novel	2671	17	NA	NA	2	24	combination_of_known_junctions	FALSE	canonical	3	22	junction_15	21.4631467093403	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGTATTTTGTGAAAAAA	0	True	NA	NA	False	AATAAA	-18	NA	34493332	34867338	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_+_34493515_34679467_34679593_34755975_34756044_34765960_34766042_34794036_34794251_34806218_34806305_34811958_34812114_34815908_34816015_34818163_34818331_34820790_34820916_34827592_34827677_34848295_34848384_34851830_34851929_34858284_34858399_34863965_34864063_34866110
H1_mix_00041393	chr18	+	4248	7	FSM	ENSG00000166974.13	ENST00000300249.10	4212	7	-40	4	-31	0	multi-exon	FALSE	canonical	3	363	junction_4	19.6638416050035	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTGCCTGGAGTTACA	NA	False	NA	14	True	AATAAA	-17	NA	35041372	35143466	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_35041662_35070194_35070323_35097445_35097592_35101945_35102160_35126947_35127088_35132031_35132191_35140294
H1_mix_00041394	chr18	+	277	1	FSM	ENSG00000280096.1	ENST00000624092.1	234	1	3	-46	3	46	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35082011	35082288	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_35082000_35082300
H1_mix_00041395	chr18	+	678	2	FSM	ENSG00000186812.13	ENST00000589630.1	690	2	12	0	5	0	multi-exon	FALSE	canonical	3	17	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAGAGCCATACTTGTCT	-5	True	NA	NA	False	GATAAA	-39	NA	35241041	35243000	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_35241110_35242390
H1_mix_00041396	chr18	+	2066	3	FSM	ENSG00000186812.13	ENST00000585800.1	2046	3	-20	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	11	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGTCCTATTAAAGACTG	-10	True	NA	-26	True	NA	NA	NA	35241036	35244069	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_35241691_35242390_35242885_35243151
H1_mix_00041397	chr18	+	1515	3	FSM	ENSG00000186812.13	ENST00000591206.5	1516	3	0	1	0	-1	multi-exon	FALSE	canonical	3	17	junction_1	10	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGCCACAGTGTATTCAA	-10	True	NA	4	True	ATTAAA	-16	NA	35241036	35244099	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_35241110_35242390_35242885_35243151
H1_mix_00041398	chr18	+	5281	4	FSM	ENSG00000186812.13	ENST00000330501.12	5259	4	-22	0	-18	0	multi-exon	FALSE	canonical	3	15	junction_3	9.93310961716756	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTATACTGGTTATGTGT	NA	False	NA	14	True	ATTAAA	-18	NA	35241011	35249808	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_35241110_35242390_35242885_35243151_35243294_35245261
H1_mix_00041400	chr18	+	5116	3	FSM	ENSG00000257267.4	ENST00000399070.3	5124	3	8	0	-4	0	multi-exon	FALSE	canonical	3	215	junction_1	38.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTACTGGTTCCTGTTGAA	NA	False	NA	6	True	AATAAA	-17	NA	35290289	35310766	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_35290392_35291009_35291233_35305975
H1_mix_00041401	chr18	+	5183	2	FSM	ENSG00000257267.4	ENST00000638208.2	2233	2	-4	-2946	-4	290	multi-exon	FALSE	canonical	3	121	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGAATGATCTTCCTGC	NA	False	NA	NA	False	AATGAA	-13	NA	35290289	35311056	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_35290392_35305975
H1_mix_00041402	chr18	+	1865	2	FSM	ENSG00000257267.4	ENST00000639141.1	1865	2	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATCTTGTTAAACATCACA	14	False	NA	24	True	AATAAA	-18	NA	35290383	35306991	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_35291233_35305975
H1_mix_00041403	chr18	+	3970	12	FSM	ENSG00000141429.14	ENST00000269195.6	3970	12	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_1	110.30970675765	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGCCTTACATTGGTTT	0	True	NA	29	True	ATTAAA	-42	NA	35581739	35711834	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_35581863_35654559_35654802_35663627_35663803_35677590_35677758_35683390_35683599_35687015_35687187_35689172_35689291_35691011_35691193_35692180_35692321_35702896_35702996_35703508_35703644_35709623
H1_mix_00041404	chr18	+	1770	12	FSM	ENSG00000141429.14	ENST00000590654.1	1770	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	241.090257780554	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAAAACGAAAAAAATA	95	False	NA	21	True	NA	NA	NA	35654655	35709780	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_35654802_35659857_35659931_35663627_35663803_35677590_35677758_35683390_35683599_35687015_35687187_35689172_35689291_35691011_35691193_35692180_35692321_35702896_35702996_35703508_35703644_35709623
H1_mix_00041405	chr18	+	3200	1	FSM	ENSG00000267397.1	ENST00000590983.1	1609	1	-1600	9	-1600	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCATCAAGCAAGTCTCAC	NA	False	NA	NA	False	AATAAA	-20	NA	35714769	35717969	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_35714800_35718000
H1_mix_00041406	chr18	+	1766	1	FSM	ENSG00000278986.1	ENST00000623524.1	1766	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGCTCCAGGCCATCAC	NA	False	NA	NA	False	NA	NA	NA	35972150	35973916	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_35972200_35973900
H1_mix_00041407	chr18	+	1695	4	FSM	ENSG00000141428.17	ENST00000610527.4	1059	4	-389	-247	-389	247	multi-exon	TRUE	canonical	3	35	junction_1	124.408824267234	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTATAGATCACTCAATA	NA	False	NA	NA	False	AGTAAA	-16	NA	35972235	35979533	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_35972841_35974895_35975096_35977409_35977601_35978834
H1_mix_00041408	chr18	+	985	5	FSM	ENSG00000141428.17	ENST00000592875.6	985	5	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_1	27.5590275590413	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGGCATTACTGTTTTT	1	True	NA	14	True	TATAAA	-19	NA	35972678	35979278	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_35972806_35972884_35972908_35974895_35975096_35977409_35977601_35978834
H1_mix_00041409	chr18	+	958	4	FSM	ENSG00000141428.17	ENST00000333234.5	958	4	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_1	15.121728296285	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGGCATTACTGTTTTT	72	False	NA	14	True	TATAAA	-19	NA	35972784	35979278	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_35972908_35974895_35975096_35977409_35977601_35978834
H1_mix_00041411	chr18	+	2473	21	FSM	ENSG00000134759.14	ENST00000351393.10	2453	21	-20	0	-9	0	multi-exon	FALSE	canonical	2	18	junction_4	132.342699080833	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACTACATGCTTGCAGT	270	False	NA	24	True	AATAAA	-20	NA	36129870	36174648	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_36130072_36133237_36133317_36136306_36136378_36138269_36138427_36141136_36141202_36142280_36142348_36142825_36142967_36144938_36145035_36145947_36146049_36146249_36146382_36154849_36155000_36156465_36156655_36158834_36158905_36159734_36159831_36159957_36160016_36160931_36161005_36164474_36164668_36167100_36167223_36170062_36170197_36171046_36171161_36174484
H1_mix_00041412	chr18	+	3300	23	FSM	ENSG00000134759.14	ENST00000442325.6	2722	23	-508	-70	-54	0	multi-exon	FALSE	canonical	3	18	junction_6	167.168865977089	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTGAGTTTCTGGGTTT	2469	False	NA	27	True	NA	NA	NA	36129389	36174721	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_36130072_36133237_36133317_36136306_36136378_36138269_36138427_36138794_36138873_36139418_36139614_36141136_36141202_36142280_36142348_36142825_36142967_36144938_36145035_36145947_36146049_36146249_36146382_36154849_36155000_36156465_36156655_36158834_36158905_36159734_36159831_36159957_36160016_36160931_36161005_36164474_36164668_36167100_36167223_36170062_36170197_36171046_36171161_36174484
H1_mix_00041413	chr18	+	3053	22	FSM	ENSG00000134759.14	ENST00000539560.5	2542	22	-511	0	-54	0	multi-exon	FALSE	canonical	3	38	junction_18	125.927272679651	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTGAGTTTCTGGGTTT	2469	False	NA	27	True	NA	NA	NA	36129389	36174721	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_36130072_36133237_36133317_36136306_36136378_36138269_36138427_36138794_36138873_36141136_36141202_36142280_36142348_36142825_36142967_36144938_36145035_36145947_36146049_36146249_36146382_36154849_36155000_36156465_36156655_36158834_36158905_36159734_36159831_36159957_36160016_36160931_36161005_36164474_36164668_36167152_36167223_36170062_36170197_36171046_36171161_36174484
H1_mix_00041414	chr18	+	8451	22	FSM	ENSG00000134759.14	ENST00000358232.11	8432	22	-19	0	0	0	multi-exon	FALSE	canonical	3	487	junction_5	50.1900243948221	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCCTTTGGTAAACCCC	279	False	NA	10	True	AATAAA	-22	NA	36129879	36180557	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_36130072_36133237_36133317_36136306_36136378_36138269_36138427_36138794_36138873_36141136_36141202_36142280_36142348_36142825_36142967_36144938_36145035_36145947_36146049_36146249_36146382_36154849_36155000_36156465_36156655_36158834_36158905_36159734_36159831_36159957_36160016_36160931_36161005_36164474_36164668_36167100_36167223_36170062_36170197_36171046_36171161_36174484
H1_mix_00041417	chr18	+	6192	15	FSM	ENSG00000075643.6	ENST00000261326.6	6182	15	-14	4	-14	-4	multi-exon	FALSE	canonical	3	17	junction_7	5.81386449860704	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATCTCAATTTTCTTTGC	NA	False	NA	14	True	ATTAAA	-15	NA	36187482	36272153	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_36187682_36195256_36195347_36198689_36198757_36199682_36200325_36203112_36203190_36205076_36205277_36213365_36213483_36215515_36215978_36220054_36220218_36248921_36249001_36251158_36251284_36256967_36257074_36260036_36260176_36266748_36266854_36268532
H1_mix_00041418	chr18	+	1020	2	NNC	ENSG00000075643.6	novel	6182	15	NA	NA	6	-72507	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCATTCTACACAAAACAAA	7	True	NA	NA	False	AATAAA	-16	NA	36187502	36194307	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_+_36187682_36193466
H1_mix_00041419	chr18	+	4158	14	FSM	ENSG00000134775.16	ENST00000589114.5	4154	14	-4	0	0	0	multi-exon	FALSE	canonical	2	4	junction_12	6.9188020990058	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTACTTGCATAATTGTCC	-5	True	NA	NA	False	NA	NA	NA	36297712	36711469	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_36298001_36355538_36355646_36372679_36372745_36501931_36502000_36512437_36512544_36576450_36576546_36594786_36594899_36602673_36602769_36611951_36612096_36625510_36625750_36658074_36658189_36681435_36681571_36693208_36693424_36709094
H1_mix_00041420	chr18	+	4968	25	FSM	ENSG00000134775.16	ENST00000257209.8	4967	25	-1	0	0	0	multi-exon	FALSE	canonical	3	9	junction_10	6.12244844812923	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATGAGAAACTTTTATTC	-5	True	NA	4	True	AATAAA	-15	NA	36297712	36780055	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_36298001_36355538_36355646_36372679_36372745_36501931_36502000_36512437_36512544_36576450_36576546_36594786_36594899_36602673_36602769_36611951_36612096_36625510_36625750_36658074_36658189_36681435_36681571_36687127_36687179_36693208_36693424_36709094_36709392_36717831_36718716_36730645_36730805_36740655_36740839_36742736_36742857_36744031_36744194_36746944_36747136_36755118_36755312_36760607_36760783_36769264_36769427_36779447
H1_mix_00041421	chr18	+	4854	10	FSM	ENSG00000150477.15	ENST00000280020.10	4853	10	-1	0	-1	0	multi-exon	FALSE	canonical	0	0	junction_5	13.1824799555235	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGGTTTGATATTGAATT	1	True	NA	12	True	AATAAA	-25	NA	36829125	37225334	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_36829197_36834319_36834356_36835233_36835377_36844207_36844303_36885556_36885673_36959307_36959436_37066889_37067546_37160199_37160382_37172972_37173082_37222016
H1_mix_00041422	chr18	+	1216	5	FSM	ENSG00000150477.15	ENST00000592521.5	1190	5	41	-67	39	67	multi-exon	FALSE	canonical	3	25	junction_3	4.18330013267038	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACTATTGGGTTTAGAC	45	False	NA	NA	False	NA	NA	NA	36829169	36886471	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_36829197_36834319_36834356_36835233_36835377_36844207_36844303_36885556
H1_mix_00041423	chr18	+	2568	1	FSM	ENSG00000150477.15	ENST00000601437.2	2594	1	-10	36	-10	-36	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTTACATTGTAATAAAT	NA	False	NA	NA	False	AATAAA	-17	NA	37229568	37232136	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_37229600_37232100
H1_mix_00041424	chr18	+	241	1	FSM	ENSG00000225253.1	ENST00000457751.1	369	1	110	18	110	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAGCTGAAAAACAA	NA	False	NA	NA	False	AAGAAA	-16	NA	41819162	41819403	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_41819200_41819400
H1_mix_00041425	chr18	+	3023	25	FSM	ENSG00000078142.14	ENST00000262039.9	9415	25	-42	6434	-42	0	multi-exon	TRUE	canonical	3	97	junction_15	19.4415077147381	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTCTTATTTATGTAC	-36	True	NA	11	True	AATAAA	-13	NA	41955191	42081396	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_41955360_41957569_41957759_41962488_41962633_41970326_41970457_41987811_41987899_41990458_41990555_41993269_41993342_41995889_41995995_41996637_41996731_42004355_42004542_42013441_42013597_42015475_42015567_42020637_42020706_42027442_42027549_42029324_42029442_42033825_42033958_42037691_42037821_42038780_42038851_42040676_42040742_42043732_42043818_42049530_42049606_42057882_42058052_42064739_42064831_42067387_42067514_42081122
H1_mix_00041426	chr18	+	597	5	FSM	ENSG00000078142.14	ENST00000589550.1	597	5	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_3	9.33742469849155	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACATTAAAAAAATATTGTT	2387	False	NA	NA	False	NA	NA	NA	41957666	41990602	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_41957759_41962488_41962633_41970326_41970457_41987811_41987899_41990458
H1_mix_00041428	chr18	+	1467	2	FSM	ENSG00000152217.20	ENST00000645568.1	3412	2	0	1945	0	-1945	multi-exon	FALSE	canonical	1	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGGGCACGTTTTCTTC	462	False	NA	NA	False	NA	NA	NA	44701337	44870201	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_44701833_44869229
H1_mix_00041429	chr18	+	531	3	FSM	ENSG00000152240.13	ENST00000591098.1	531	3	-49	49	-47	-49	multi-exon	FALSE	canonical	3	1341	junction_2	84.5	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAATTTAGTTACTTCAT	6066	False	NA	NA	False	AATAAA	-9	NA	46104330	46118425	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_46104442_46105193_46105369_46118180
H1_mix_00041430	chr18	+	727	6	FSM	ENSG00000152240.13	ENST00000585518.5	506	6	-67	-154	-43	0	multi-exon	FALSE	canonical	3	62	junction_2	614.238520446251	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTTTCTGTGTGGTTGG	-2	True	NA	30	True	ATTAAA	-16	NA	46104334	46128333	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_46104442_46105193_46105369_46123298_46123365_46124821_46124894_46125743_46125792_46128074
H1_mix_00041431	chr18	+	1162	9	FSM	ENSG00000152240.13	ENST00000591715.5	1098	9	-61	-3	-43	0	multi-exon	FALSE	canonical	3	29	junction_2	500.269411792286	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTTTCTGTGTGGTTGG	-2	True	NA	30	True	ATTAAA	-16	NA	46104334	46128333	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_46104442_46105193_46105409_46118180_46118317_46119925_46120061_46122466_46122591_46123298_46123365_46124821_46124894_46125743_46125792_46128074
H1_mix_00041432	chr18	+	1077	9	FSM	ENSG00000152240.13	ENST00000282058.11	1072	9	-5	0	0	0	multi-exon	FALSE	canonical	3	1262	junction_4	145.328883485011	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTTTCTGTGTGGTTGG	4	True	NA	30	True	ATTAAA	-16	NA	46104379	46128333	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_46104442_46105193_46105369_46118180_46118317_46119925_46120061_46122466_46122591_46123298_46123365_46124821_46124894_46125743_46125792_46128074
H1_mix_00041433	chr18	+	616	7	FSM	ENSG00000152240.13	ENST00000589554.5	616	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	579.247116714639	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGACTTTACAGAGTTCTT	30	True	NA	NA	False	AATAAA	-30	NA	46104405	46128169	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_46104442_46105193_46105369_46122466_46122591_46123298_46123365_46124821_46124894_46125743_46125792_46128074
H1_mix_00041435	chr18	+	5745	4	FSM	ENSG00000152242.11	ENST00000619301.4	5264	4	-481	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	30.8796948747159	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAATGATATCTTCTGAG	2	True	NA	2	True	AATAAA	-14	NA	46173552	46266983	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_46174331_46215810_46216596_46253696_46253824_46262928
H1_mix_00041436	chr18	+	5471	5	FSM	ENSG00000152242.11	ENST00000615052.5	5456	5	-15	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	56.4136508302733	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTCTGAGGTTTTTTTT	-12	True	NA	11	True	AATAAA	-23	NA	46174018	46266992	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_46174331_46215810_46216596_46240004_46240188_46253696_46253824_46262928
H1_mix_00041439	chr18	+	3707	18	FSM	ENSG00000167216.19	ENST00000683218.1	3689	18	-18	0	-12	0	multi-exon	FALSE	canonical	2	9	junction_15	12.1019315567741	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATGCTTAAACTTCTTC	32	False	NA	NA	False	AATAAA	-16	NA	46917583	47102243	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_46917927_46946056_46946547_46946853_46946924_47046456_47046528_47052879_47053047_47054395_47054439_47058234_47058353_47059555_47059655_47062971_47063071_47063283_47063362_47067020_47067120_47069219_47069284_47069481_47069601_47075276_47075369_47077350_47077462_47099242_47099406_47100253_47100357_47100865
H1_mix_00041441	chr18	+	1653	1	FSM	ENSG00000267156.1	ENST00000592307.1	737	1	28	-944	28	944	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAACAAACAAAAAAA	98	False	NA	NA	False	AATAAA	-16	NA	47630139	47631792	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_47630100_47631800
H1_mix_00041443	chr18	+	5764	12	FSM	ENSG00000134030.14	ENST00000256413.8	5765	12	0	1	0	-1	multi-exon	FALSE	canonical	3	12	junction_1	12.2420491991758	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCCAGAGTCTGTGCTCT	-17	True	NA	NA	False	AATAAA	-20	NA	48539030	48863216	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_48539313_48619537_48619746_48636613_48636686_48663751_48663826_48664446_48664552_48670668_48670745_48711618_48711696_48757918_48758406_48761389_48761690_48817220_48817377_48857587_48857642_48859343
H1_mix_00041445	chr18	+	2940	4	FSM	ENSG00000134030.14	ENST00000587860.1	2940	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	7.40870359029762	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGGCCTTGTGGCAAACA	2159	False	NA	NA	False	NA	NA	NA	48760181	48860565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_48761690_48817220_48817377_48857587_48857642_48859343
H1_mix_00041447	chr18	+	10366	10	FSM	ENSG00000101670.12	ENST00000261292.9	10418	10	13	39	10	-39	multi-exon	FALSE	canonical	3	11	junction_1	3.94405318873308	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTTAACTTTTAAATAAAC	11	False	NA	NA	False	NA	NA	NA	49562069	49599146	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_49562406_49565316_49565499_49567441_49567622_49569436_49569549_49575368_49575591_49581414_49581658_49582361_49582483_49583555_49583775_49586745_49586851_49590500
H1_mix_00041454	chr18	+	2894	7	FSM	ENSG00000154839.10	ENST00000285116.8	2849	7	-45	0	-39	0	multi-exon	FALSE	canonical	3	161	junction_1	29.4207976325139	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGCATTTCCCTGAGTT	-14	True	NA	14	True	AATAAA	-14	NA	50375000	50394168	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_50375195_50375819_50375919_50380125_50380251_50382128_50382227_50385215_50385354_50391123_50391294_50392098
H1_mix_00041460	chr18	+	2092	2	FSM	ENSG00000082212.13	ENST00000591925.2	2092	2	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTATAAAAATCATAGTGTA	NA	False	NA	-42	True	AATAAA	-19	NA	50939116	50947838	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_50940387_50947016
H1_mix_00041461	chr18	+	2328	4	FSM	ENSG00000141642.9	ENST00000269466.8	2211	4	-75	-42	-26	42	multi-exon	FALSE	canonical	3	33	junction_2	14.522013940528	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCACTCAGAGGAGCTC	NA	False	NA	NA	False	AAAACA	-29	NA	50967964	50988163	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_50968115_50974396_50974562_50984095_50984564_50986618
H1_mix_00041463	chr18	+	1492	2	FSM	ENSG00000141642.9	ENST00000586966.2	1505	2	-21	34	-16	-34	multi-exon	FALSE	canonical	3	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGTTTTTCAGAATAAAAC	-9	True	NA	NA	False	NA	NA	NA	50968023	50969832	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_50968115_50968431
H1_mix_00041466	chr18	+	459	2	FSM	ENSG00000141646.15	ENST00000585448.1	459	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCTCTGTTAGCCCCAT	NA	False	NA	NA	False	NA	NA	NA	51051092	51054916	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_51051416_51054780
H1_mix_00041470	chr18	+	2543	5	FSM	ENSG00000101751.11	ENST00000577971.5	2536	5	-7	0	0	0	multi-exon	FALSE	canonical	3	380	junction_2	19.9170153386495	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAATTAGGAATTTCA	30	True	NA	NA	False	NA	NA	NA	54269584	54282923	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_54271486_54273925_54274091_54277702_54277856_54280666_54280904_54282836
H1_mix_00041474	chr18	+	6396	8	FSM	ENSG00000166845.15	ENST00000382911.8	4056	8	-676	-1664	3	0	multi-exon	FALSE	canonical	3	105	junction_3	33.4053643498606	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGAGGTTCTGGAAATC	-17	True	NA	24	True	TATAAA	-38	NA	54357908	54382032	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_54358871_54360526_54360856_54361642_54362432_54362770_54362922_54365718_54365822_54372465_54372598_54374213_54374285_54378173
H1_mix_00041477	chr18	+	10087	4	FSM	ENSG00000177511.6	ENST00000324000.4	10087	4	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_1	0.942809041582063	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCTGGTTGTCTGTCAC	-17	True	NA	13	True	AATAAA	-24	NA	57352556	57368931	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_57353026_57354401_57354525_57356912_57357471_57359994
H1_mix_00041478	chr18	+	1906	3	FSM	ENSG00000267040.7	ENST00000592201.1	1954	3	-4	52	-4	-52	multi-exon	FALSE	canonical	3	20	junction_2	8	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTCAATAAAACTTAATAAAA	1	True	NA	67	True	NA	NA	NA	57630345	57669244	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_57630519_57641558_57642053_57668005
H1_mix_00041479	chr18	+	4679	31	NIC	ENSG00000049759.20	novel	8633	31	NA	NA	0	-557	combination_of_known_junctions	FALSE	canonical	3	8	junction_18	68.9656597316536	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATACCGTGTACTGCCTG	-29	True	NA	48	True	NA	NA	NA	58044225	58397591	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_+_58044709_58165787_58165862_58245426_58245509_58248898_58248938_58252000_58252055_58315981_58316033_58322424_58322487_58323231_58323335_58324995_58325163_58328994_58329128_58330737_58330915_58333817_58333893_58341037_58341170_58341677_58341798_58342905_58343104_58349536_58349615_58350990_58351046_58351145_58351200_58357193_58357253_58364267_58364334_58365998_58366229_58367745_58367868_58370396_58370468_58373173_58373270_58383245_58383320_58385525_58385587_58387438_58387499_58389084_58389193_58390645_58390743_58391486_58391560_58396166
H1_mix_00041481	chr18	+	748	2	FSM	ENSG00000049759.20	ENST00000617539.1	728	2	-20	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCGGTCGGTTTCACTGG	-3	True	NA	10	True	AATAAA	-24	NA	58044366	58045477	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_58044709_58045071
H1_mix_00041482	chr18	+	8251	30	FSM	ENSG00000049759.20	ENST00000382850.8	8251	30	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	35.7779849806368	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAAGTGTTATGGGTTGT	178	False	NA	23	True	AATAAA	-28	NA	58044547	58401539	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_58044709_58165787_58165862_58245426_58245509_58248898_58248938_58252000_58252055_58315981_58316033_58322424_58322487_58323231_58323335_58324995_58325163_58328994_58329128_58330737_58330915_58333817_58333893_58341037_58341170_58341677_58341798_58342905_58343104_58349536_58349615_58350990_58351046_58357193_58357253_58364267_58364334_58365998_58366229_58367745_58367868_58370396_58370468_58373173_58373270_58383245_58383320_58385525_58385587_58387438_58387499_58389084_58389193_58390645_58390743_58391486_58391560_58396166
H1_mix_00041483	chr18	+	4989	29	FSM	ENSG00000049759.20	ENST00000456173.6	4978	29	-11	0	-11	0	multi-exon	FALSE	canonical	3	74	junction_1	46.1201292987196	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	86	True	NA	NA	NA	58195378	58398157	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_58195734_58245426_58245509_58248898_58248938_58252000_58252055_58315981_58316033_58322424_58322487_58323231_58323335_58324995_58325163_58328994_58329128_58330737_58330915_58333817_58333893_58341037_58341170_58341677_58341798_58342905_58343104_58349536_58349615_58350990_58351046_58357193_58357253_58364267_58364334_58365998_58366229_58367745_58367868_58370396_58370468_58373173_58373270_58383245_58383320_58385525_58385587_58387438_58387499_58389084_58389193_58390645_58390743_58391486_58391560_58396166
H1_mix_00041484	chr18	+	4950	30	NIC	ENSG00000049759.20	novel	4978	29	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_11	67.1929445364732	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TATGTAACTAAAAAAAAAAA	30	True	NA	77	True	NA	NA	NA	58195468	58398148	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_+_58195734_58245426_58245509_58248898_58248938_58252000_58252055_58315981_58316033_58322424_58322487_58323231_58323335_58324995_58325163_58328994_58329128_58330737_58330915_58333817_58333893_58335477_58335538_58341037_58341170_58341677_58341798_58342905_58343104_58349536_58349615_58350990_58351046_58357193_58357253_58364267_58364334_58365998_58366229_58367745_58367868_58370396_58370468_58373173_58373270_58383245_58383320_58385525_58385587_58387438_58387499_58389084_58389193_58390645_58390743_58391486_58391560_58396166
H1_mix_00041485	chr18	+	7127	19	FSM	ENSG00000049759.20	ENST00000679791.1	7127	19	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	84.7788881534973	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAAGTGTTATGGGTTGT	NA	False	NA	23	True	AATAAA	-28	NA	58341037	58401539	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_58341170_58341677_58341798_58342905_58343104_58349536_58349615_58350990_58351046_58351145_58351200_58357193_58357253_58364267_58364334_58365998_58366229_58367745_58367868_58370396_58370468_58373173_58373270_58383245_58383320_58385525_58385587_58387438_58387499_58389084_58389193_58390645_58390743_58391486_58391560_58396166
H1_mix_00041492	chr18	+	5324	10	FSM	ENSG00000074657.14	ENST00000591083.5	5324	10	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	98.3528543084403	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTATTGCAATTGGCCG	12	True	NA	NA	False	NA	NA	NA	58862947	58985538	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_58863167_58865469_58865580_58918270_58920634_58934432_58934615_58939444_58939622_58948066_58948230_58953517_58953800_58979054_58979168_58981469_58981618_58983971
H1_mix_00041493	chr18	+	6337	11	NNC	ENSG00000074657.14	novel	6556	10	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_9	126.604462796538	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGAATTTTTGTTTTTGG	-3	True	NA	5	True	AATAAA	-20	NA	58863530	58986480	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_+_58863751_58865303_58865386_58865469_58865580_58918270_58920634_58934432_58934615_58939444_58939622_58948066_58948230_58953517_58953800_58979054_58979156_58981469_58981618_58983971
H1_mix_00041495	chr18	+	5718	11	NIC	ENSG00000074657.14	novel	5585	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	103.507729179999	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTGTGCTTCTGTGAGA	28	False	NA	24	True	AATAAA	-14	NA	58863561	58985944	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_+_58863687_58865303_58865386_58865469_58865580_58918270_58920634_58934432_58934615_58939444_58939622_58948066_58948230_58953517_58953800_58979054_58979168_58981469_58981618_58983971
H1_mix_00041498	chr18	+	5714	11	NIC	ENSG00000074657.14	novel	6556	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	34	junction_1	101.271121253791	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTGTGCTTCTGTGAGA	25	True	NA	24	True	AATAAA	-14	NA	58864408	58985944	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_+_58864530_58865303_58865386_58865469_58865580_58918270_58920634_58934432_58934615_58939444_58939622_58948066_58948230_58953517_58953800_58979054_58979168_58981469_58981618_58983971
H1_mix_00041500	chr18	+	6556	10	FSM	ENSG00000074657.14	ENST00000591808.6	6556	10	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	60.4534307045565	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGAATTTTTGTTTTTGG	-7	True	NA	5	True	AATAAA	-20	NA	58864876	58986480	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_58865386_58865469_58865580_58918270_58920634_58934432_58934615_58939444_58939622_58948066_58948230_58953517_58953800_58979054_58979168_58981469_58981618_58983971
H1_mix_00041504	chr18	+	4024	2	FSM	ENSG00000074657.14	ENST00000590442.1	4024	2	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTGTGCTTCTGTGAGA	NA	False	NA	24	True	AATAAA	-14	NA	58979566	58985944	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_58981618_58983971
H1_mix_00041505	chr18	+	1560	3	FSM	ENSG00000166562.9	ENST00000585864.1	1088	3	-420	-52	-402	52	multi-exon	FALSE	canonical	3	874	junction_1	46.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGAATTAAATTTAGGTAT	NA	False	NA	NA	False	NA	NA	NA	59139463	59153413	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_59140036_59149512_59149623_59152535
H1_mix_00041507	chr18	+	718	5	FSM	ENSG00000166562.9	ENST00000588875.2	718	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_4	356.436880807809	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTTTTCTTTTGTGGAC	-5	True	NA	15	True	AATAAA	-16	NA	59139898	59158832	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_59140036_59149512_59149623_59152535_59152686_59155687_59155808_59158631
H1_mix_00041511	chr18	+	724	1	FSM	ENSG00000242060.1	ENST00000472161.1	790	1	116	-50	116	50	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAATAAAAAAAAATAA	143	False	NA	NA	False	AATAAA	-22	NA	60149691	60150415	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_60149700_60150400
H1_mix_00041514	chr18	+	1603	1	FSM	ENSG00000266900.1	ENST00000588561.1	1603	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTGTCTGGAATAAGGAGA	NA	False	NA	NA	False	AATAAA	-20	NA	62245809	62247412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_62245800_62247400
H1_mix_00041515	chr18	+	3768	8	FSM	ENSG00000141655.17	ENST00000617039.4	3756	8	-12	0	-12	0	multi-exon	FALSE	canonical	0	0	junction_7	21.7968355688693	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAAGAATGAATTTCTCA	-1	True	NA	65	True	NA	NA	NA	62325274	62387710	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_62325428_62348167_62348250_62349811_62349938_62354390_62354535_62358247_62358342_62359954_62360050_62361679_62361794_62384750
H1_mix_00041518	chr18	+	6552	17	FSM	ENSG00000081913.14	ENST00000262719.10	6299	17	-253	0	-253	0	multi-exon	FALSE	canonical	3	151	junction_1	17.810526206432	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACAAGTATCTGCTTTTG	30	False	NA	15	True	AATAAA	-18	NA	62715287	62980433	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_62717260_62830034_62830232_62838783_62838910_62860434_62860602_62895010_62895158_62895780_62896012_62902963_62903167_62905223_62905285_62914912_62915009_62919958_62920115_62941717_62941919_62945108_62945272_62958628_62958760_62963367_62963473_62972513_62972709_62975396_62975626_62978261
H1_mix_00041519	chr18	+	780	2	FSM	ENSG00000267390.2	ENST00000589905.2	820	2	33	7	33	-7	multi-exon	FALSE	canonical	2	4	junction_1	0	357	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAAGATTTTGAGTGGTTT	2	True	NA	0	True	AATAAA	-16	NA	63367327	63381624	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_63367860_63381376
H1_mix_00041520	chr18	+	2107	4	FSM	ENSG00000221887.6	ENST00000408945.5	2102	4	-5	0	-5	0	multi-exon	FALSE	canonical	3	20	junction_3	3.09120616516523	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCCAGTGTGTCATGCC	0	True	NA	8	True	AATAAA	-16	NA	63949295	63961835	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_63949401_63953353_63953528_63954407_63954558_63960157
H1_mix_00041523	chr18	+	457	3	FSM	ENSG00000263958.3	ENST00000578967.2	562	3	103	2	59	-1	multi-exon	FALSE	canonical	2	2	junction_1	1.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGAATTCTGTTTTATTT	40	False	NA	4	True	AATAAA	-16	NA	72869039	72881397	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_72869141_72880086_72880235_72881189
H1_mix_00041525	chr18	+	4559	4	NNC	ENSG00000261780.3	novel	1443	3	NA	NA	1	1344	intron_retention	FALSE	canonical	2	2	junction_2	10.6144555520604	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCTAATATTTTTATCTT	NA	False	NA	NA	False	AATAAA	-15	NA	73324941	73351223	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_+_73327189_73332462_73332582_73348526_73348580_73349083
H1_mix_00041526	chr18	+	1443	3	FSM	ENSG00000261780.3	ENST00000583942.2	1443	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTTTTATAATTTGTGT	816	False	NA	NA	False	ATTAAA	-17	NA	73326660	73349879	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_73327189_73332462_73332582_73349083
H1_mix_00041529	chr18	+	591	4	FSM	ENSG00000133313.15	ENST00000583399.5	601	4	-7	17	-7	0	multi-exon	FALSE	canonical	3	1329	junction_1	230.385666992449	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCGCCGCGCGCCTATG	5	True	NA	NA	False	NA	NA	NA	74496299	74506011	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_74496432_74499881_74500034_74501328_74501473_74505848
H1_mix_00041530	chr18	+	2660	12	FSM	ENSG00000133313.15	ENST00000579847.5	2653	12	-7	0	-7	0	multi-exon	TRUE	canonical	1	502	junction_1	463.241436077531	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATCTCAGTTGCTCGTC	5	True	NA	23	True	AATAAA	-30	NA	74496299	74521131	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_74496432_74499936_74500034_74501328_74501473_74505848_74506012_74508839_74508929_74510812_74511014_74512447_74512533_74513558_74513720_74516227_74516393_74518498_74518641_74518948_74519097_74519998
H1_mix_00041532	chr18	+	4979	12	FSM	ENSG00000133313.15	ENST00000324262.9	4975	12	-4	0	0	0	multi-exon	FALSE	canonical	1	696	junction_9	333.339327769792	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGGACCAGTTTTTTTTA	2	True	NA	13	True	AATAAA	-24	NA	74496358	74523454	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_74496432_74499881_74500034_74501328_74501473_74505848_74506012_74508839_74508929_74510812_74511014_74512447_74512533_74513558_74513720_74516227_74516393_74518498_74518641_74518948_74519097_74519998
H1_mix_00041534	chr18	+	2349	9	FSM	ENSG00000133313.15	ENST00000324301.12	2349	9	0	0	0	0	multi-exon	FALSE	canonical	1	60	junction_2	639.733538279806	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCTCCATCTCAGTTGCTC	74	False	NA	20	True	AATAAA	-27	NA	74499860	74521128	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_74500034_74501328_74501473_74510812_74511014_74512447_74512533_74513558_74513720_74516227_74516393_74518498_74518641_74518948_74519097_74519998
H1_mix_00041540	chr18	+	4148	1	FSM	ENSG00000179981.11	ENST00000584217.1	7080	1	2935	-3	2935	2	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGATTGTCATGTCGTCATT	NA	False	NA	13	True	AATAAA	-25	NA	75285798	75289946	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_75285800_75289900
H1_mix_00041541	chr18	+	872	2	FSM	ENSG00000265778.4	ENST00000581996.3	1225	2	8	345	8	-345	multi-exon	FALSE	canonical	3	5	junction_1	0	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAATCTTGTAATCTGTTT	5	True	NA	NA	False	GATAAA	-18	NA	76491636	76493575	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_76491690_76492756
H1_mix_00041543	chr18	+	10548	31	FSM	ENSG00000130856.17	ENST00000253159.12	8124	31	-250	-2174	-250	0	multi-exon	FALSE	canonical	0	0	junction_26	10.1206060424594	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGTATATTTACTTCTT	1350	False	NA	NA	False	AATAAA	-25	NA	76823909	76972901	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_76824407_76849525_76849669_76851774_76851940_76868684_76868864_76871700_76871826_76875491_76875665_76878008_76878153_76880112_76880317_76881283_76881513_76895012_76895286_76899018_76899223_76904379_76904522_76905154_76905416_76908319_76908574_76910067_76910170_76910659_76910812_76912243_76912348_76913746_76913899_76915646_76915860_76919775_76920059_76923070_76923175_76925188_76925555_76927036_76927183_76927276_76927518_76927926_76928107_76937155_76937344_76947520_76947653_76955984_76956183_76959686_76959817_76960678_76960856_76968214
H1_mix_00041544	chr18	+	6007	3	FSM	ENSG00000256463.10	ENST00000537592.7	6007	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	11	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGAGATGCTCTGGTAG	-2	True	NA	NA	False	NA	NA	NA	78979817	78998969	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_78980357_78992073_78995463_78996890
H1_mix_00041548	chr18	+	3678	5	FSM	ENSG00000267655.1_ENSG00000166377.21	ENST00000586722.5	1650	5	-113	-1915	10	77	multi-exon	FALSE	canonical	3	16	junction_4	35.5694742721902	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGTTTATAAAATTGATC	2	True	NA	87	True	NA	NA	NA	79069294	79117997	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_79069530_79096475_79096650_79110354_79110506_79113240_79113355_79114993
H1_mix_00041549	chr18	+	4443	30	FSM	ENSG00000166377.21	ENST00000426216.6	4361	30	-99	17	10	0	multi-exon	FALSE	canonical	3	19	junction_28	17.9098681439095	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGTTCTCACATAAAGAG	2	True	NA	12	True	AGTAAA	-14	NA	79069294	79378266	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_79069530_79096475_79096650_79110354_79110506_79113240_79113355_79126266_79126376_79143801_79143861_79154503_79154556_79176812_79176908_79193182_79193264_79206936_79207013_79213961_79214039_79253380_79253542_79277053_79277197_79303603_79303717_79306985_79307235_79329140_79329303_79330011_79330105_79336627_79336712_79337278_79337450_79342267_79342367_79344264_79344355_79345427_79345573_79345774_79345840_79347769_79347926_79348131_79348197_79359353_79359463_79372824_79372883_79373897_79374102_79375393_79375427_79377246
H1_mix_00041556	chr18	+	1784	8	FSM	ENSG00000166377.21	ENST00000590477.5	1784	8	0	0	0	0	multi-exon	TRUE	canonical	2	11	junction_4	23.4024244339717	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGTTCTCACATAAAGAG	164	False	NA	12	True	AGTAAA	-14	NA	79344327	79378266	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_79344355_79345427_79345573_79345774_79345840_79347769_79347926_79359353_79359463_79372824_79372883_79373897_79374102_79377246
H1_mix_00041557	chr18	+	4818	8	FSM	ENSG00000131196.18	ENST00000591814.5	4819	8	0	1	0	-1	multi-exon	FALSE	canonical	3	9	junction_1	20.4968887634097	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCAGGTATCCGTGTTCC	-1	True	NA	NA	False	AATAAA	-18	NA	79395929	79470013	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_79396352_79410402_79411502_79433578_79433739_79448781_79448985_79450953_79451127_79451675_79451817_79461310_79461367_79467449
H1_mix_00041558	chr18	+	4640	10	FSM	ENSG00000131196.18	ENST00000253506.9	4642	10	0	2	0	0	multi-exon	FALSE	canonical	3	9	junction_1	22.2910046630673	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCGTAGTCTGCGAGTGG	137	False	NA	29	True	AATAAA	-20	NA	79395855	79529323	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_79396352_79410402_79411502_79433578_79433739_79448781_79448985_79450953_79451127_79451675_79451817_79461310_79461367_79467449_79467583_79486247_79486631_79527527
H1_mix_00041560	chr18	+	2531	8	FSM	ENSG00000131196.18	ENST00000592223.5	2531	8	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_6	5.16661180572146	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTGATGTGGTCTTTAA	20	True	NA	19	True	AATAAA	-19	NA	79400332	79468001	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_79400480_79410402_79411502_79433578_79433739_79448781_79448985_79450953_79451127_79451675_79451817_79461310_79461367_79467449
H1_mix_00041563	chr18	+	3751	13	FSM	ENSG00000060069.18	ENST00000613122.5	3744	13	-7	0	-7	0	multi-exon	FALSE	canonical	3	200	junction_10	44.3961803912604	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTCTTCTCGTGGGTGTG	-23	True	NA	18	True	AATAAA	-15	NA	79679795	79754503	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_79680262_79695224_79695309_79695976_79696071_79697859_79697989_79704766_79704918_79710345_79710437_79712971_79713139_79714490_79715529_79717534_79717677_79717809_79718017_79728906_79729070_79736354_79736522_79753651
H1_mix_00041564	chr18	+	3577	12	FSM	ENSG00000060069.18	ENST00000075430.11	3538	12	-43	4	0	0	multi-exon	FALSE	canonical	3	104	junction_10	64.1565749997806	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTCTCTTCTCGTGGG	-16	True	NA	14	True	AATAAA	-11	NA	79679802	79754499	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_79680262_79695224_79695309_79695976_79696071_79697859_79697989_79704766_79704918_79710345_79710437_79712971_79713139_79714490_79715529_79717534_79717677_79717809_79718017_79736354_79736522_79753651
H1_mix_00041565	chr18	+	1887	4	FSM	ENSG00000060069.18	ENST00000299543.9	1887	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	147.117488952047	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTCTCTTCTCGTGGG	NA	False	NA	14	True	AATAAA	-11	NA	79714838	79754499	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_79715529_79717534_79717677_79717809_79718017_79753651
H1_mix_00041566	chr18	+	2671	2	FSM	ENSG00000060069.18	ENST00000590599.2	2671	2	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTCTTCTCGTGGGTG	NA	False	NA	16	True	AATAAA	-13	NA	79734700	79754501	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_79736522_79753651
H1_mix_00041567	chr18	+	689	4	FSM	ENSG00000226742.4	ENST00000451882.3	689	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	6.59966329107444	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTATCTTTTTCTGGT	2	True	NA	19	True	AATAAA	-32	NA	79964642	79970822	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_79964787_79966611_79966679_79968088_79968184_79970439
H1_mix_00041571	chr18	-	2108	21	FSM	ENSG00000079134.13	ENST00000261600.11	2108	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	96.9287753971957	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGTACAGTCGGCTGGT	-6	True	NA	-15	True	AATAAA	-15	NA	268047	214519	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_214922_215428_215505_216485_216634_218885_218970_223439_223506_224083_224180_224923_224995_225088_225140_225336_225404_226800_226902_246323_246456_247848_247958_252538_252613_254272_254356_259179_259276_259681_259731_260185_260305_264025_264093_265302_265364_265456_265531_267965
H1_mix_00041572	chr18	-	536	3	FSM	ENSG00000079134.13	ENST00000584642.1	536	3	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_1	36.5	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATGTCTATATATTTTA	NA	False	NA	NA	False	AATAAA	-15	NA	252577	246067	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_246456_247848_247958_252538
H1_mix_00041574	chr18	-	5718	10	FSM	ENSG00000158270.12	ENST00000400256.5	5724	10	0	6	0	-3	multi-exon	FALSE	canonical	3	322	junction_4	114.775142488839	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACGATCAATGTTCAACAA	19	True	NA	-15	True	AATAAA	-18	NA	500701	316742	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_320065_321661_321808_331667_331778_333006_333144_334741_335231_346294_347342_348064_348164_357399_357523_480706_480758_500507
H1_mix_00041575	chr18	-	4719	9	FSM	ENSG00000158270.12	ENST00000582147.1	4719	9	0	0	0	0	multi-exon	FALSE	canonical	3	489	junction_8	84.6389390292671	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATATATATATATATATT	-2	True	NA	-9	True	ATTAAA	-15	NA	500722	319360	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_320065_321661_321808_331667_331778_333006_335231_346294_347342_348064_348164_357399_357523_480706_480758_500507
H1_mix_00041576	chr18	-	3024	9	NIC	ENSG00000158270.12	novel	5724	10	NA	NA	10	-15	combination_of_known_splicesites	FALSE	canonical	3	66	junction_8	204.111144661432	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATACATGTGTATATATAT	29	False	NA	-24	True	TTTAAA	-12	NA	500691	319375	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_320065_321661_321808_331667_331778_333006_333144_334741_335231_346294_347342_348064_348164_357399_357523_500507
H1_mix_00041577	chr18	-	666	3	NNC	ENSG00000176912.6	novel	487	2	NA	NA	-207	0	at_least_one_novel_splicesite	TRUE	canonical	3	38	junction_1	114	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCACGTAGTGTTTGGTC	471	False	NA	-9	True	AATAAA	-20	NA	657802	649619	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_649965_657453_657660_657687
H1_mix_00041578	chr18	-	585	2	FSM	ENSG00000176912.6	ENST00000688530.1	586	2	-1	2	-1	0	multi-exon	FALSE	canonical	3	46	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCACGTAGTGTTTGGTC	-19	True	NA	-9	True	AATAAA	-20	NA	658292	649619	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_649965_658052
H1_mix_00041579	chr18	-	844	2	FSM	ENSG00000176912.6	ENST00000323813.4	991	2	0	147	0	0	multi-exon	FALSE	canonical	3	157	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCACGTAGTGTTTGGTC	NA	False	NA	-9	True	AATAAA	-20	NA	658340	649619	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_649965_657841
H1_mix_00041580	chr18	-	6346	10	FSM	ENSG00000132199.20	ENST00000584259.6	6340	10	0	-6	0	0	multi-exon	FALSE	canonical	3	24	junction_1	25.7509438877706	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGGCTCATGCCTGAAAT	NA	False	NA	NA	False	ATTAAA	-24	NA	693277	670317	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_673077_674160_674407_675320_675403_677344_677445_677742_677873_678695_678738_683245_683381_685920_686009_688573_688609_690548
H1_mix_00041581	chr18	-	5362	16	FSM	ENSG00000132199.20	ENST00000647584.2	5362	16	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_11	17.8093608344975	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGGCTCATGCCTGAAAT	19	True	NA	NA	False	ATTAAA	-24	NA	712630	670317	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_674407_675320_675403_677344_677445_677742_677873_678695_678738_683245_683381_685920_686009_688573_688609_690548_690632_691067_691107_691203_691277_693881_693909_694247_694335_697239_697356_706469_706579_712503
H1_mix_00041582	chr18	-	4183	16	FSM	ENSG00000132199.20	ENST00000383578.7	4188	16	11	-6	-1	0	multi-exon	FALSE	canonical	3	11	junction_14	28.5574664297954	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGGCTCATGCCTGAAAT	-2	True	NA	NA	False	ATTAAA	-24	NA	712651	670317	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_673077_674160_674407_675320_675403_677344_677445_677742_677873_678695_678738_683245_683381_685920_686009_688573_688609_690548_690632_691067_691107_691203_691277_693881_693909_694247_694335_706469_706579_712503
H1_mix_00041588	chr18	-	4840	13	NNC	ENSG00000176105.14	novel	4605	12	NA	NA	-10	40972	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	119.574128565598	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAGACAGAGGGTGTGTG	-7	True	NA	NA	False	NA	NA	NA	812556	680615	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_680698_721748_724633_732833_732966_736807_736962_739734_739812_742917_743098_743259_743416_745707_745858_745947_746052_747919_748019_751704_751805_756556_756836_812113
H1_mix_00041591	chr18	-	4605	12	FSM	ENSG00000176105.14	ENST00000314574.5	4605	12	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_2	41.3934957161546	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGTGGTCAATTTTCT	22	True	NA	-1	True	ATTAAA	-22	NA	812242	721587	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_724633_732833_732966_736807_736962_739734_739812_742917_743098_743259_743416_745707_745858_745947_746052_747919_748019_751704_751805_756556_756836_812113
H1_mix_00041592	chr18	-	4639	12	FSM	ENSG00000176105.14	ENST00000584307.5	4639	12	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_11	109.281500177257	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGTGGTCAATTTTCT	3	True	NA	-1	True	ATTAAA	-22	NA	812546	721587	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_724633_732833_732966_736807_736962_739734_739812_742917_743098_743259_743416_745707_745858_745947_746052_747919_748019_751704_751805_756556_756836_812383
H1_mix_00041593	chr18	-	3680	9	FSM	ENSG00000101574.15	ENST00000574538.2	3684	9	4	0	4	0	multi-exon	FALSE	canonical	3	46	junction_7	15.7619002661481	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATTTGAATTCTTTCCA	-24	True	NA	-4	True	ATTAAA	-22	NA	2571501	2537529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_2539146_2544194_2544287_2544652_2544760_2547354_2547530_2552694_2552765_2554668_2555039_2563796_2563860_2566820_2567655_2571148
H1_mix_00041594	chr18	-	3582	8	FSM	ENSG00000101574.15	ENST00000319888.10	3601	8	14	5	10	0	multi-exon	FALSE	canonical	2	3	junction_1	30.3119832167183	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATTTGAATTCTTTCCA	-18	True	NA	-4	True	ATTAAA	-22	NA	2571495	2537529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_2539146_2544652_2544760_2547354_2547530_2552694_2552765_2554668_2555039_2563796_2563860_2566820_2567655_2571148
H1_mix_00041595	chr18	-	535	1	FSM	ENSG00000266405.3	ENST00000583365.1	535	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTGTTGCACTGCAGT	5032	False	NA	NA	False	AATGAA	-5	NA	2653259	2652724	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_2652700_2653300
H1_mix_00041596	chr18	-	6069	20	NNC	ENSG00000101577.10	novel	6229	20	NA	NA	558	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_19	14.2138397696481	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTGGCTCTTTTCTTCA	765	False	NA	NA	False	AATAAA	-22	NA	3012586	2916992	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_2920438_2920777_2920882_2921532_2921648_2922046_2922200_2923774_2923862_2924397_2924547_2925223_2925369_2926722_2926806_2927721_2927812_2928590_2928661_2929064_2929159_2931255_2931444_2934350_2934451_2937691_2938038_2939479_2939604_2940604_2940713_2951054_2951357_2954503_2954600_2960648_2960850_3012517
H1_mix_00041597	chr18	-	6067	20	FSM	ENSG00000101577.10	ENST00000677752.1	6052	20	0	-15	0	10	multi-exon	FALSE	canonical	3	32	junction_19	9.66961142143526	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTCTTCAGGGGACATT	-9	True	NA	NA	False	AATAAA	-31	NA	3013144	2916983	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_2920438_2920777_2920882_2921532_2921648_2922046_2922200_2923774_2923862_2924397_2924547_2925223_2925369_2926722_2926806_2927721_2927812_2928590_2928661_2929064_2929159_2931255_2931444_2934350_2934451_2937691_2938038_2939479_2939604_2940604_2940713_2951054_2951357_2954503_2954600_2960648_2960850_3013086
H1_mix_00041598	chr18	-	1264	1	FSM	ENSG00000263606.1	ENST00000581139.1	1264	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAACCGATGCAGTGGGC	NA	False	NA	NA	False	NA	NA	NA	2946890	2945626	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_2945600_2946900
H1_mix_00041599	chr18	-	6663	13	FSM	ENSG00000170579.17	ENST00000315677.8	6655	13	0	-8	0	8	multi-exon	FALSE	canonical	3	16	junction_1	5.20416499866533	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTTTTACTAGAGTC	-9	True	NA	5	True	AATAAA	-26	NA	4455307	3496023	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_3499395_3502492_3502646_3508569_3508662_3534193_3534616_3567489_3567582_3581874_3582249_3729134_3729376_3742334_3742513_3814058_3814274_3879111_3880141_4005115_4005202_4151179_4151288_4455005
H1_mix_00041600	chr18	-	3634	12	FSM	ENSG00000170579.17	ENST00000581527.5	3525	12	0	-109	0	27	multi-exon	FALSE	canonical	3	27	junction_1	2.94859540731397	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTTTCAAGAAAAATAGGA	1	True	NA	NA	False	NA	NA	NA	4455266	3502109	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_3502646_3508569_3508662_3534193_3534616_3567489_3567582_3581874_3582249_3729134_3729376_3742334_3742513_3814058_3814274_3879111_3880141_4005115_4005202_4151179_4151288_4455005
H1_mix_00041601	chr18	-	1895	7	FSM	ENSG00000170579.17	ENST00000639615.1	1898	7	3	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	11.5277443105271	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGAAGACATGACTCCTCC	NA	False	NA	NA	False	NA	NA	NA	4151287	3708463	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_3708502_3729134_3729376_3742334_3742513_3814058_3814274_3879111_3880141_4005115_4005202_4151179
H1_mix_00041602	chr18	-	1301	1	FSM	ENSG00000250933.1	ENST00000509132.1	967	1	-223	-111	-223	111	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCATGCAGACCCCCTGAA	NA	False	NA	NA	False	NA	NA	NA	3978838	3977537	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_3977500_3978800
H1_mix_00041603	chr18	-	1877	1	FSM	ENSG00000264575.1	ENST00000581067.1	1875	1	0	-2	0	2	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATTGTTTAAAACGCGTA	14	True	NA	52	True	AATAAA	-18	NA	5238598	5236721	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_5236700_5238600
H1_mix_00041604	chr18	-	3914	4	FSM	ENSG00000198081.11	ENST00000357006.8	3528	4	-93	-293	62	293	multi-exon	FALSE	canonical	3	22	junction_3	49.7482551341139	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTTGGTGGCAGCAGA	769	False	NA	NA	False	NA	NA	NA	5296133	5288725	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_5292205_5293243_5293328_5293971_5294002_5295812
H1_mix_00041605	chr18	-	3769	4	FSM	ENSG00000198081.11	ENST00000651870.1	3372	4	-399	2	70	-2	multi-exon	FALSE	canonical	1	2	junction_3	57.5750717662504	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCATTCCTCTTTTCATTT	777	False	NA	-7	True	TATAAA	-15	NA	5296125	5289023	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_5292205_5293243_5293328_5293971_5294002_5295651
H1_mix_00041606	chr18	-	1752	3	FSM	ENSG00000198081.11	ENST00000400143.7	1814	3	62	0	62	0	multi-exon	FALSE	canonical	3	63	junction_2	40	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCGGTGGGACAGGGACAC	769	False	NA	NA	False	NA	NA	NA	5296133	5290857	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_5292205_5293243_5293328_5295812
H1_mix_00041607	chr18	-	442	4	FSM	ENSG00000198081.11	ENST00000578327.1	442	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	41.2499158248299	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATGTTAACTTAATGATG	2078	False	NA	NA	False	AAAAAG	-1	NA	5294824	5291900	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_5292205_5293243_5293328_5293971_5294002_5294800
H1_mix_00041609	chr18	-	4086	20	NIC	ENSG00000082397.18	novel	6962	22	NA	NA	-83	-1	combination_of_known_junctions	FALSE	canonical	2	10	junction_19	34.1815261698763	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTTGTATGTTTAATAA	NA	False	NA	-3	True	AATAAA	-24	NA	5630783	5392381	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_5393479_5394676_5394794_5395066_5395148_5395608_5395708_5396200_5396333_5397057_5397427_5406776_5406969_5410565_5410620_5419710_5419932_5423377_5423554_5424261_5424360_5428312_5428466_5433468_5433557_5433902_5434122_5438034_5438111_5443837_5443881_5445139_5445245_5478240_5478439_5489000_5489162_5630376
H1_mix_00041610	chr18	-	3957	19	NIC	ENSG00000082397.18	novel	3370	20	NA	NA	10	2	combination_of_known_junctions	FALSE	canonical	3	65	junction_18	15.9443476574685	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTATGTTTAATAATTT	NA	False	NA	0	True	AATAAA	-27	NA	5544271	5392378	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_5393479_5395066_5395148_5395608_5395708_5396200_5396333_5397057_5397427_5406776_5406969_5410565_5410620_5419710_5419932_5423377_5423554_5424261_5424360_5428312_5428466_5433468_5433557_5433902_5434122_5438034_5438111_5443837_5443881_5445139_5445245_5478240_5478439_5489000_5489195_5543912
H1_mix_00041611	chr18	-	3830	19	FSM	ENSG00000154655.16	ENST00000317931.12	3549	19	15	-296	15	285	multi-exon	FALSE	canonical	0	0	junction_3	5.58022301426107	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCATTTCAGCAGTAGGG	18	True	NA	NA	False	NA	NA	NA	6414896	5954420	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_5956388_5960093_5960157_5969392_5969563_6080880_6080952_6093354_6093529_6138193_6138297_6171827_6171943_6213148_6213260_6215749_6215836_6237963_6238041_6239717_6239873_6241357_6241450_6243293_6243430_6244483_6244589_6263946_6264039_6301902_6301958_6311553_6311657_6311997_6312057_6414800
H1_mix_00041612	chr18	-	923	1	FSM	ENSG00000235552.5	ENST00000489915.1	867	1	0	-56	0	56	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACTGACAGGATTGAGGG	20	False	NA	NA	False	ATTAAA	-35	NA	6463010	6462087	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_6462100_6463000
H1_mix_00041613	chr18	-	422	2	FSM	ENSG00000266441.1	ENST00000577327.1	491	2	0	69	0	-69	multi-exon	FALSE	canonical	3	46	junction_1	0	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCACACCCTCAGTGCGCC	NA	False	NA	10	True	NA	NA	NA	6729862	6728889	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_6729169_6729719
H1_mix_00041614	chr18	-	9643	63	FSM	ENSG00000101680.16	ENST00000389658.4	9642	63	0	-1	0	1	multi-exon	FALSE	canonical	3	142	junction_41	64.8763431949394	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAAGCCTTTTATTTCTT	2	True	NA	-1	True	AATACA	-19	NA	7117797	6941740	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_6942240_6943179_6943403_6947162_6947297_6948402_6948557_6949100_6949260_6950781_6950972_6955352_6955466_6956635_6956766_6958476_6958663_6959340_6959493_6961585_6961760_6961944_6962060_6964661_6964804_6965287_6965433_6966146_6966298_6971856_6971982_6973056_6973208_6974902_6975037_6975936_6976081_6977726_6977882_6978195_6978379_6980520_6980638_6982496_6982591_6983098_6983235_6985236_6985401_6985526_6985644_6986136_6986348_6992560_6992721_6993640_6993753_6995356_6995447_6997741_6997885_6999444_6999639_6999910_6999998_7002263_7002386_7007138_7007277_7008487_7008609_7009238_7009367_7010199_7010386_7011299_7011480_7011994_7012139_7013814_7014052_7015721_7015859_7016490_7016672_7017277_7017385_7023163_7023376_7024379_7024467_7025978_7026107_7032065_7032177_7032983_7033096_7034478_7034691_7035986_7036089_7037577_7037752_7038809_7038951_7040075_7040237_7042144_7042251_7043226_7043406_7044721_7044840_7046277_7046368_7049077_7049258_7050693_7050937_7079974_7080088_7080286_7080458_7117659
H1_mix_00041615	chr18	-	2306	7	FSM	ENSG00000101680.16	ENST00000492048.5	2306	7	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_6	53.372901988431	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGAATTCCCTGGCTCT	NA	False	NA	-8	True	ATTAAA	-14	NA	6956447	6941888	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_6942240_6943179_6943403_6947162_6947297_6948402_6948557_6949100_6949260_6950781_6950972_6955352
H1_mix_00041617	chr18	-	10374	62	FSM	ENSG00000101680.16	ENST00000579014.5	10374	62	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_41	65.399333558412	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTACGTTACACTAAAACCA	70	False	NA	-67	True	NA	NA	NA	7117759	6941947	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_6942240_6943179_6943403_6947162_6947297_6948402_6948557_6949100_6949260_6950781_6950972_6955352_6955466_6956635_6956766_6958476_6958663_6959340_6959493_6961585_6961760_6961944_6962060_6964661_6964804_6965287_6965433_6966146_6966298_6971856_6971982_6973056_6973208_6974902_6975037_6975936_6976081_6977726_6977882_6978195_6978379_6980520_6980638_6982496_6982591_6983098_6983235_6985236_6985401_6985526_6985644_6986136_6986348_6992560_6992721_6993640_6993753_6995356_6995447_6997741_6997885_6999444_6999639_6999910_6999998_7002263_7002386_7007138_7007277_7008487_7008609_7009238_7009367_7010199_7010386_7011299_7011480_7011994_7012139_7013814_7014052_7015721_7015859_7016490_7016672_7017277_7017385_7023163_7023376_7024379_7024467_7025978_7026107_7032065_7032177_7032983_7033096_7034478_7034691_7035986_7036089_7037577_7037752_7038809_7038951_7040075_7040237_7042144_7043406_7044721_7044840_7046277_7046368_7049077_7049258_7050693_7050937_7079974_7080088_7080286_7080458_7117659
H1_mix_00041619	chr18	-	2450	3	NNC	ENSG00000264964.2	novel	5142	3	NA	NA	-16	-6626	at_least_one_novel_splicesite	TRUE	canonical	2	13	junction_1	0.5	46	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAAGTCCTTACGTTAACA	361	False	NA	NA	False	AATAAA	-17	NA	9334461	9317147	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_9319182_9322061_9322153_9334136
H1_mix_00041620	chr18	-	4280	21	NNC	ENSG00000154845.16	novel	3885	20	NA	NA	-114	92	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_20	49.0361091441807	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAGCCCTAAGAGCAGGT	2189	False	NA	91	True	NA	NA	NA	9615009	9546698	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_9547953_9549196_9549339_9550051_9550187_9550277_9550399_9553321_9553423_9557220_9557383_9559418_9559605_9561979_9562076_9563377_9563551_9570156_9570684_9577063_9577192_9583116_9583276_9584514_9584581_9584720_9584829_9588088_9588236_9588710_9588854_9593767_9593875_9595017_9595103_9614225_9614271_9614477_9614632_9614768
H1_mix_00041621	chr18	-	3928	20	FSM	ENSG00000154845.16	ENST00000400556.8	3923	20	0	-5	0	2	multi-exon	FALSE	canonical	3	75	junction_18	33.4494284843251	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTTCTCTGGAATCTGC	-8	True	NA	1	True	ATTAAA	-24	NA	9614559	9546788	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_9547953_9549196_9549339_9550051_9550187_9550277_9550399_9553321_9553423_9557220_9557383_9559418_9559605_9561979_9562076_9563377_9563551_9570156_9570684_9577063_9577192_9583116_9583276_9584514_9584581_9584720_9584829_9588088_9588236_9588710_9588854_9593767_9593875_9595017_9595154_9614225_9614271_9614477
H1_mix_00041622	chr18	-	3887	20	FSM	ENSG00000154845.16	ENST00000400555.7	3885	20	0	-2	0	2	multi-exon	FALSE	canonical	3	101	junction_18	29.3505888137174	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTTCTCTGGAATCTGC	-18	True	NA	1	True	ATTAAA	-24	NA	9614569	9546788	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_9547953_9549196_9549339_9550051_9550187_9550277_9550399_9553321_9553423_9557220_9557383_9559418_9559605_9561979_9562076_9563377_9563551_9570156_9570684_9577063_9577192_9583116_9583276_9584514_9584581_9584720_9584829_9588088_9588236_9588710_9588854_9593767_9593875_9595017_9595103_9614225_9614271_9614477
H1_mix_00041623	chr18	-	4110	21	NIC	ENSG00000154845.16	novel	3885	20	NA	NA	104	-3	combination_of_known_junctions	FALSE	canonical	3	23	junction_9	54.6379904462088	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAGAGAGATATATACACT	2407	False	NA	-25	True	AATAAA	-19	NA	9614791	9546912	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_9547953_9549196_9549339_9550051_9550187_9550277_9550399_9553321_9553423_9557220_9557383_9559418_9559605_9561979_9562076_9562921_9563047_9563377_9563551_9570156_9570684_9577063_9577192_9583116_9583276_9584514_9584581_9584720_9584829_9588088_9588236_9588710_9588854_9593767_9593875_9595017_9595103_9614225_9614271_9614477
H1_mix_00041624	chr18	-	4132	21	NNC	ENSG00000154845.16	novel	3885	20	NA	NA	-114	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	49.0361091441807	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAGATATATACACTTTT	2189	False	NA	-22	True	AATAAA	-22	NA	9615009	9546909	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_9547953_9549196_9549339_9550051_9550187_9550277_9550399_9553321_9553423_9557220_9557383_9559418_9559605_9561979_9562076_9563377_9563551_9570156_9570684_9577063_9577192_9583116_9583276_9584514_9584581_9584720_9584829_9588088_9588236_9588710_9588854_9593767_9593875_9595017_9595103_9614225_9614271_9614477_9614632_9614705
H1_mix_00041625	chr18	-	3686	20	NIC	ENSG00000154845.16	novel	3885	20	NA	NA	-140	-5	combination_of_known_junctions	FALSE	canonical	3	13	junction_19	46.7819246766771	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAGAGAGAGATATATACA	2163	False	NA	-27	True	AATAAA	-17	NA	9615035	9546914	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_9547953_9549196_9549339_9550051_9550187_9550277_9550399_9553321_9553423_9557220_9557383_9559418_9559605_9561979_9562076_9563377_9563551_9570156_9570684_9577063_9577192_9583116_9583276_9584514_9584581_9584720_9584829_9588088_9588236_9588710_9588854_9593767_9593875_9595017_9595103_9614225_9614271_9615018
H1_mix_00041628	chr18	-	2300	1	FSM	ENSG00000272799.1	ENST00000609787.1	534	1	-1792	26	-1792	-26	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATAAATCTTGCTGCTGCT	564	False	NA	NA	False	NA	NA	NA	9914641	9912341	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_9912300_9914600
H1_mix_00041629	chr18	-	306	1	FSM	ENSG00000264311.1	ENST00000578567.1	430	1	110	14	110	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	216	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCGCAAAAGAATGAATAAAA	118	False	NA	NA	False	AATGAA	-22	NA	10624195	10623889	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_10623900_10624200
H1_mix_00041630	chr18	-	8259	52	FSM	ENSG00000154864.14	ENST00000503781.7	8259	52	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_11	14.5943482870027	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTTAGAACACAGACTGC	963	False	NA	NA	False	AAAACA	-7	NA	11148588	10671526	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_10671780_10672689_10672874_10675208_10675289_10677746_10677876_10680198_10680372_10681660_10681754_10682103_10682293_10689654_10689803_10691224_10691384_10696073_10696289_10696391_10696540_10697747_10697881_10698924_10699178_10701988_10702172_10704393_10704653_10705335_10705747_10714763_10714931_10715649_10715817_10718199_10718260_10731406_10731522_10736603_10736711_10741030_10741103_10742493_10742616_10744141_10744232_10748470_10748631_10750090_10750188_10752635_10752880_10757968_10758135_10759481_10759584_10759704_10759910_10760910_10761112_10762499_10762626_10762921_10763099_10770147_10770309_10773411_10773630_10784783_10784958_10787035_10787185_10789078_10789366_10791200_10791325_10794771_10795003_10797373_10797523_10800336_10800476_10801389_10801429_10803874_10803995_10807111_10807275_10855352_10855567_10857000_10857212_10871252_10871416_10911185_10911229_10979534_10979661_11066126_11066223_11148524
H1_mix_00041631	chr18	-	3330	11	FSM	ENSG00000154889.17	ENST00000588072.6	3330	11	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_9	14.9361976419703	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCACCTCCCAGGTTCAAG	-6	True	NA	NA	False	NA	NA	NA	11908317	11882621	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_11884628_11885675_11885817_11886498_11886622_11886712_11886779_11886916_11887026_11888668_11888744_11889386_11889491_11893467_11893577_11896983_11897357_11906202_11906310_11908200
H1_mix_00041632	chr18	-	2427	12	FSM	ENSG00000154889.17	ENST00000496196.5	2427	12	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	18.0357771165633	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAGATGTGATGTGCAGA	-6	True	NA	NA	False	AATATA	-16	NA	11908317	11883689	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_11884628_11884878_11885044_11885675_11885817_11886498_11886622_11886712_11886779_11886916_11887026_11888668_11888744_11889386_11889491_11893467_11893577_11896983_11897357_11906202_11906310_11908200
H1_mix_00041633	chr18	-	2395	14	NIC	ENSG00000154889.17	novel	2427	12	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	26.8081061661024	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTGTTTCCCTCTTCCT	13	True	NA	-25	True	AATAAA	-4	NA	11908298	11884069	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_11884628_11884878_11885044_11885675_11885817_11886498_11886622_11886712_11886779_11886916_11887026_11888668_11888744_11889386_11889491_11893467_11893577_11896983_11897357_11897525_11897621_11902584_11902857_11906202_11906310_11908200
H1_mix_00041634	chr18	-	705	2	FSM	ENSG00000154889.17	ENST00000592755.1	705	2	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTCACTCACATGCACG	NA	False	NA	27	True	NA	NA	NA	11885121	11884165	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_11884628_11884878
H1_mix_00041637	chr18	-	2886	1	FSM	ENSG00000256616.3	ENST00000591780.1	3365	1	189	290	189	-290	mono-exon	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTCCAGAGGTGTATG	NA	False	NA	NA	False	NA	NA	NA	12076407	12073521	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_12073500_12076400
H1_mix_00041638	chr18	-	3162	17	FSM	ENSG00000141385.12	ENST00000269143.8	3160	17	0	-2	0	2	multi-exon	FALSE	canonical	3	591	junction_15	55.9637159238019	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGTCCCTATTTATGCTC	5	True	NA	1	True	AATAAA	-31	NA	12377227	12328941	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_12329784_12337340_12337536_12340200_12340402_12344131_12344248_12348272_12348384_12351084_12351211_12351305_12351414_12353004_12353159_12356693_12356832_12358669_12358944_12359926_12360052_12363781_12363857_12366964_12367118_12367275_12367383_12370848_12370927_12371591_12371692_12376968
H1_mix_00041639	chr18	-	3367	2	FSM	ENSG00000141385.12	ENST00000588893.1	3367	2	0	0	0	0	multi-exon	FALSE	canonical	3	728	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	12348328	12340936	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_12344248_12348272
H1_mix_00041640	chr18	-	5534	16	FSM	ENSG00000134278.16	ENST00000410092.7	5533	16	0	-1	0	0	multi-exon	FALSE	canonical	3	72	junction_5	13.5656428770135	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTGTTGAGTTGCTA	14	True	NA	-5	True	AATAAA	-17	NA	12658045	12446511	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_12449897_12452254_12452392_12452484_12452513_12453067_12453139_12454345_12454484_12463350_12463494_12464867_12464959_12479698_12479872_12493071_12493202_12496015_12496103_12506476_12506642_12512453_12512532_12535475_12535602_12546673_12546905_12635061_12635097_12657529
H1_mix_00041641	chr18	-	2198	1	FSM	ENSG00000267249.1	ENST00000585877.1	720	1	-1479	1	-1479	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGAGTCTGGCATTAATAT	NA	False	NA	NA	False	AATAAA	-19	NA	12672624	12670426	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_12670400_12672600
H1_mix_00041642	chr18	-	5887	12	FSM	ENSG00000267249.1_ENSG00000101624.11	ENST00000262127.7	2895	12	0	-2992	0	793	multi-exon	FALSE	canonical	3	66	junction_6	13.1689592452595	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAATGTCTCCAAGGTGG	0	True	NA	-3	True	ATTAAA	-18	NA	12702723	12669632	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_12673504_12674535_12674754_12678108_12678443_12680661_12680829_12686261_12686451_12691358_12691488_12695253_12695352_12697222_12697409_12698978_12699204_12699829_12699906_12700957_12701114_12702485
H1_mix_00041643	chr18	-	684	4	FSM	ENSG00000101624.11	ENST00000585751.1	684	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	5.24933858267454	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATTTTGTAATATTCT	3652	False	NA	NA	False	AATAAA	-21	NA	12699123	12691232	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_12691488_12695253_12695352_12697222_12697409_12698978
H1_mix_00041645	chr18	-	897	4	FSM	ENSG00000101624.11	ENST00000586887.1	897	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	42.4970587217516	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTGGATATTATTTTTT	-2	True	NA	NA	False	TTTAAA	-42	NA	12702777	12698792	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_12699166_12699829_12699906_12700957_12701114_12702485
H1_mix_00041646	chr18	-	1618	11	NNC	ENSG00000175354.20	novel	1648	11	NA	NA	0	4997	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	153.814856239571	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGAGGTTGGCTGGGCTGGG	-13	True	NA	NA	False	NA	NA	NA	12884214	12780480	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_12780517_12785477_12785845_12794383_12794486_12801969_12802152_12814202_12814356_12817155_12817366_12825809_12825945_12830942_12831042_12836790_12836892_12859163_12859255_12884072
H1_mix_00041647	chr18	-	2264	1	FSM	ENSG00000175354.20	ENST00000589444.1	2264	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTGGTTTGTGTGCAT	NA	False	NA	-1	True	ATTAAA	-19	NA	12787741	12785477	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_12785500_12787700
H1_mix_00041648	chr18	-	1700	10	FSM	ENSG00000175354.20	ENST00000327283.7	1706	10	6	0	6	0	multi-exon	FALSE	canonical	1	143	junction_7	103.454528688564	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTGGTTTGTGTGCAT	185	False	NA	-1	True	ATTAAA	-19	NA	12884332	12785477	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_12785845_12794383_12794486_12801969_12802152_12814202_12814356_12817155_12817366_12825809_12825945_12830942_12831042_12836790_12836892_12859163_12859255_12884072
H1_mix_00041649	chr18	-	1648	11	FSM	ENSG00000175354.20	ENST00000591115.5	1648	11	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_6	184.020216280712	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTTGTTGGTTTGTGTG	-13	True	NA	-4	True	ATTAAA	-16	NA	12884214	12785480	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_12785845_12794383_12794486_12801969_12802152_12814202_12814356_12817155_12817366_12819213_12819283_12825809_12825945_12830942_12831042_12836790_12836892_12859163_12859255_12884072
H1_mix_00041650	chr18	-	3611	9	FSM	ENSG00000175354.20	ENST00000309660.10	3470	9	15	-156	0	156	multi-exon	FALSE	canonical	1	143	junction_6	108.952326156902	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGCATTGGTTTGTCTT	-21	True	NA	NA	False	TTTAAA	-11	NA	12884222	12791995	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_12794486_12801969_12802152_12814202_12814356_12817155_12817366_12825809_12825945_12830942_12831042_12836790_12836892_12859163_12859255_12884072
H1_mix_00041655	chr18	-	4256	4	FSM	ENSG00000177150.13	ENST00000651643.1	4210	4	53	-99	0	99	multi-exon	TRUE	canonical	3	207	junction_3	6.94422221866655	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAATTCCAGGAATTTTAA	50	False	NA	NA	False	NA	NA	NA	13726505	13663247	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_13666714_13671861_13671974_13681604_13682106_13726328
H1_mix_00041657	chr18	-	1002	4	FSM	ENSG00000177150.13	ENST00000591269.1	1038	4	36	0	-35	0	multi-exon	TRUE	canonical	3	20	junction_2	95.2272136640689	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAAACTCCCAGAGTGGA	NA	False	NA	NA	False	NA	NA	NA	13726627	13671911	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_13671974_13681604_13682106_13687742_13687883_13726328
H1_mix_00041658	chr18	-	321	1	FSM	ENSG00000243779.1	ENST00000494882.1	321	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCATCTTTTATTATGAA	NA	False	NA	NA	False	NA	NA	NA	13919923	13919602	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_13919600_13919900
H1_mix_00041659	chr18	-	6934	5	FSM	ENSG00000175322.12_ENSG00000267756.1	ENST00000592049.5	558	5	6	-6382	0	-2	multi-exon	FALSE	canonical	3	19	junction_2	7.03562363973514	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATAATTTTATATATATAT	4	True	NA	-6	True	AATAAA	-24	NA	14132428	14071123	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_14077527_14078199_14078299_14080188_14080267_14084876_14085077_14132274
H1_mix_00041660	chr18	-	2114	5	FSM	ENSG00000175322.12	ENST00000587419.5	2114	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	19.0984292547843	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATCATTGTAAATGTTCT	3	True	NA	-2	True	AATAAA	-14	NA	14132429	14075993	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_14077527_14078199_14078299_14084876_14085077_14124349_14124477_14132274
H1_mix_00041663	chr18	-	7152	3	FSM	ENSG00000175322.12	ENST00000590202.3	6760	3	7	-399	0	399	multi-exon	FALSE	canonical	3	31	junction_1	11.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTTTCTATTAATATACA	4	True	NA	NA	False	TATAAA	-5	NA	14132428	14099538	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_14106410_14124349_14124477_14132274
H1_mix_00041664	chr18	-	7025	2	FSM	ENSG00000175322.12	ENST00000588435.1	599	2	29	-6455	0	399	multi-exon	FALSE	canonical	3	42	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTTTCTATTAATATACA	4	True	NA	NA	False	TATAAA	-5	NA	14132428	14099538	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_14106410_14132274
H1_mix_00041665	chr18	-	589	2	FSM	ENSG00000175322.12	ENST00000591987.1	589	2	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCACCACCACGTCTGGCT	0	True	NA	NA	False	NA	NA	NA	14132432	14124045	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_14124477_14132274
H1_mix_00041666	chr18	-	1006	1	FSM	ENSG00000187589.8	ENST00000583350.1	1212	1	250	-44	250	44	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGTATTTTGTTTGAAA	214	False	NA	NA	False	NA	NA	NA	14378507	14377501	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_14377500_14378500
H1_mix_00041667	chr18	-	1100	1	FSM	ENSG00000265766.3	ENST00000617265.2	1100	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCCATACGTCTCATCT	NA	False	NA	NA	False	NA	NA	NA	14479267	14478167	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_14478200_14479300
H1_mix_00041668	chr18	-	371	1	FSM	ENSG00000264570.1	ENST00000580193.1	2975	1	2144	460	2144	-460	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTACTGAAAACATGCAG	NA	False	NA	NA	False	NA	NA	NA	14630662	14630291	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_14630300_14630700
H1_mix_00041669	chr18	-	9378	33	FSM	ENSG00000067900.8	ENST00000399799.3	9446	33	0	68	0	-68	multi-exon	TRUE	canonical	3	112	junction_32	31.0008662933393	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCTATAAATTGGTTTC	-13	True	NA	NA	False	AATAAA	-43	NA	21111813	20946973	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_20951388_20953577_20953786_20954782_20955045_20955166_20955246_20959839_20959929_20960135_20960207_20966916_20967077_20967751_20967941_20968771_20968861_20969114_20969209_20970347_20970514_20979909_20980005_20982762_20982833_20984350_20984536_20986949_20987111_20991175_20991327_20992830_20992938_21006350_21006598_21006698_21006791_21008058_21008195_21015430_21015480_21020150_21020240_21023619_21023681_21028775_21028936_21039471_21039564_21042096_21042236_21042564_21042710_21044101_21044187_21045291_21045468_21049091_21049230_21049779_21049881_21070531_21070614_21110817
H1_mix_00041670	chr18	-	6573	33	NNC	ENSG00000067900.8	novel	9446	33	NA	NA	36	212	at_least_one_novel_splicesite	TRUE	canonical	2	8	junction_22	41.7540697866687	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGGTCTTGGGCTCTAAAA	23	False	NA	NA	False	ATTAAA	-22	NA	21111777	20949739	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_20951388_20953577_20953786_20954782_20955045_20955166_20955246_20959839_20959929_20960135_20960207_20966916_20967077_20967751_20967941_20968771_20968861_20969114_20969209_20970347_20970514_20979909_20980005_20982762_20982833_20984350_20984536_20986949_20987111_20991175_20991327_20992830_20992938_21006350_21006598_21006698_21006791_21008058_21008195_21015430_21015480_21020150_21020237_21023619_21023681_21028775_21028936_21039471_21039564_21042096_21042236_21042564_21042710_21044101_21044187_21045291_21045468_21049091_21049230_21049779_21049881_21070531_21070614_21110817
H1_mix_00041671	chr18	-	672	3	FSM	ENSG00000067900.8	ENST00000583556.1	672	3	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_2	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGGGATAATATATAAATC	NA	False	NA	NA	False	AATATA	-27	NA	20982783	20969957	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_20970514_20979909_20980005_20982762
H1_mix_00041672	chr18	-	4488	12	FSM	ENSG00000141446.11	ENST00000269214.10	4488	12	0	0	0	0	multi-exon	TRUE	canonical	3	203	junction_6	30.4972563459092	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAATGGTGTGTTGTCAT	-26	True	NA	-45	True	AATAAA	-42	NA	21600704	21529283	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_21530491_21532472_21532661_21536041_21536186_21539919_21540010_21560858_21560991_21564202_21564318_21566145_21566207_21567979_21568095_21573313_21575431_21575671_21575778_21584309_21584441_21600622
H1_mix_00041673	chr18	-	4792	13	FSM	ENSG00000141446.11	ENST00000383276.1	4773	13	0	-19	0	0	multi-exon	FALSE	canonical	2	10	junction_4	96.7848415587666	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAATGGTGTGTTGTCAT	131	False	NA	-45	True	AATAAA	-42	NA	21600884	21529283	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_21530491_21532472_21532661_21536041_21536186_21539919_21540010_21540576_21540701_21560858_21560991_21564202_21564318_21566145_21566207_21567979_21568095_21573313_21575431_21575671_21575778_21584309_21584441_21600622
H1_mix_00041674	chr18	-	2034	9	FSM	ENSG00000158201.10	ENST00000289119.7	2029	9	0	-5	0	5	multi-exon	FALSE	canonical	3	60	junction_4	9.50575483588757	233	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTGAGTTTTTATCTG	16	True	NA	-1	True	AATAAA	-21	NA	21704774	21650895	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_21651764_21656860_21657027_21657103_21657153_21659169_21659344_21664117_21664231_21683919_21683966_21702315_21702499_21703583_21703748_21704503
H1_mix_00041675	chr18	-	823	1	FSM	ENSG00000243303.1	ENST00000473394.1	348	1	-437	-38	-437	38	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGGAGCAAACGCCATG	NA	False	NA	NA	False	ATTAAA	-17	NA	21855424	21854601	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_21854600_21855400
H1_mix_00041676	chr18	-	861	4	FSM	ENSG00000266010.3	ENST00000579431.3	980	4	116	3	-6	0	multi-exon	FALSE	canonical	3	25	junction_2	8.60232526704263	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCTGCCTGACGTCTCC	3720	False	NA	-6	True	AATAAA	-36	NA	22168437	22166893	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_22167309_22167603_22167804_22168043_22168163_22168310
H1_mix_00041677	chr18	-	1792	2	FSM	ENSG00000266010.3	ENST00000583490.1	1788	2	0	-4	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCTGCCTGACGTCTCC	3189	False	NA	-6	True	AATAAA	-36	NA	22168968	22166893	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_22168384_22168666
H1_mix_00041678	chr18	-	398	4	FSM	ENSG00000265943.1	ENST00000578831.1	570	4	0	172	0	-172	multi-exon	FALSE	canonical	0	0	junction_1	3.77123616632825	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAATACGAAGTAGAAAGAG	19	True	NA	NA	False	NA	NA	NA	22933764	22699652	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_22699664_22704820_22704921_22920761_22920872_22933587
H1_mix_00041679	chr18	-	393	1	FSM	ENSG00000273232.1	ENST00000609775.1	533	1	-80	220	-80	-220	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTTAGTAAAATATAGTAC	NA	False	NA	NA	False	ACTAAA	-5	NA	22883437	22883044	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_22883000_22883400
H1_mix_00041680	chr18	-	3054	14	FSM	ENSG00000134490.14	ENST00000473688.5	2941	14	108	-221	0	217	multi-exon	FALSE	canonical	3	44	junction_7	24.8843478763412	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCGGGAAATACGCCTTGT	92	False	NA	NA	False	NA	NA	NA	23437853	23295795	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_23298068_23309679_23309745_23352195_23352290_23356593_23356664_23365633_23365669_23368714_23368751_23370215_23370262_23373711_23373764_23377645_23377672_23384989_23385068_23399565_23399648_23421366_23421445_23430630_23430678_23437780
H1_mix_00041681	chr18	-	4596	16	FSM	ENSG00000134490.14	ENST00000542162.5	1022	16	-44	-3530	0	1535	multi-exon	TRUE	canonical	3	27	junction_10	33.7599368087876	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCGTCAGTTTCTATTGGT	32	True	NA	NA	False	NA	NA	NA	23437913	23294477	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_23298068_23309679_23309745_23352195_23352290_23356593_23356664_23365633_23365669_23368714_23368751_23370215_23370262_23371421_23371471_23373711_23373764_23376826_23376942_23377645_23377672_23384989_23385068_23399565_23399648_23421366_23421445_23430630_23430678_23437780
H1_mix_00041691	chr18	-	853	4	FSM	ENSG00000141458.13	ENST00000591107.6	890	4	0	37	0	-37	multi-exon	FALSE	canonical	3	6	junction_1	66.5148270855621	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCAACTATGCCTCAATAA	NA	False	NA	-38	True	NA	NA	NA	23535622	23506220	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_23506643_23533354_23533518_23534445_23534560_23535468
H1_mix_00041692	chr18	-	4760	25	FSM	ENSG00000141458.13	ENST00000269228.10	4760	25	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_10	16.782100252617	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATCTAACCTGTCCTTA	-38	True	NA	41	True	AATACA	-19	NA	23586506	23531441	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_23532285_23533354_23533518_23534445_23534560_23535468_23535701_23536672_23536877_23538541_23538672_23539354_23539471_23539810_23540002_23540447_23540538_23541067_23541209_23541305_23541434_23543454_23543570_23544343_23544527_23544959_23545150_23548005_23548109_23551626_23551728_23554757_23554985_23556242_23556614_23557116_23557191_23560230_23560481_23561359_23561528_23568822_23568999_23572073_23572181_23573451_23573575_23586286
H1_mix_00041694	chr18	-	809	3	FSM	ENSG00000141458.13	ENST00000591075.1	809	3	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTATAGCCAGTAATGTCA	NA	False	NA	NA	False	AAGAAA	-6	NA	23539898	23536741	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_23536877_23538541_23538672_23539354
H1_mix_00041695	chr18	-	409	2	FSM	ENSG00000141458.13	ENST00000590301.1	410	2	1	0	1	0	multi-exon	FALSE	canonical	3	135	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCATAAATTGGGCAGTT	5381	False	NA	NA	False	GATAAA	-44	NA	23554984	23551545	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_23551728_23554757
H1_mix_00041696	chr18	-	3385	10	FSM	ENSG00000154065.17	ENST00000592179.6	3387	10	0	2	0	-2	multi-exon	FALSE	canonical	1	2	junction_4	22.9545982375409	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGCCTTTGCTGCTTTT	-15	True	NA	NA	False	AATAAA	-16	NA	23662911	23598927	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_23601310_23612091_23612191_23617731_23617828_23619530_23619630_23629852_23629952_23634050_23634150_23638848_23638948_23646188_23646288_23649082_23649194_23662709
H1_mix_00041697	chr18	-	919	2	FSM	ENSG00000154065.17	ENST00000585908.2	846	2	0	-73	0	73	multi-exon	FALSE	canonical	3	77	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTGAAATAGCAGTTTG	-2	True	NA	38	True	NA	NA	NA	23662772	23648337	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_23649194_23662709
H1_mix_00041698	chr18	-	344	1	FSM	ENSG00000267301.1	ENST00000588044.1	463	1	-178	297	-178	-297	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCCAAATATCCTCGGCA	NA	False	NA	NA	False	NA	NA	NA	23710465	23710121	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_23710100_23710500
H1_mix_00041700	chr18	-	4386	29	NIC	ENSG00000141447.19	novel	4152	28	NA	NA	0	2295	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	133.267047192271	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCCCTGTGCTTCCTGAA	-4	True	NA	NA	False	NA	NA	NA	24397824	24159749	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_24159829_24161896_24163282_24165064_24165156_24166578_24166703_24167328_24167446_24170326_24170454_24171408_24171499_24172375_24172484_24178012_24178196_24179737_24179836_24181144_24181280_24196124_24196201_24225041_24225199_24239219_24239383_24280841_24280949_24303636_24303719_24311983_24312107_24314248_24314348_24317148_24317213_24317326_24317401_24318600_24318646_24318747_24318810_24332941_24333087_24334244_24334331_24341546_24341659_24366891_24366967_24368286_24368373_24377412_24377536_24397654
H1_mix_00041701	chr18	-	3309	14	FSM	ENSG00000141447.19	ENST00000399443.7	3317	14	8	0	8	0	multi-exon	FALSE	canonical	3	256	junction_13	49.0989822620754	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGTTTCTTTTAAAATT	-14	True	NA	-1	True	AATAAA	-23	NA	24272224	24162044	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_24163282_24165064_24165156_24166578_24166703_24167328_24167446_24170326_24170454_24171408_24171499_24172375_24172484_24178012_24178196_24179737_24179836_24181144_24181280_24196124_24196201_24225041_24225199_24239219_24239383_24271621
H1_mix_00041702	chr18	-	4159	28	FSM	ENSG00000141447.19	ENST00000319481.8	4152	28	0	-7	0	0	multi-exon	FALSE	canonical	3	113	junction_17	127.871849429588	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGTTTCTTTTAAAATT	-4	True	NA	-1	True	AATAAA	-23	NA	24397824	24162044	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_24163282_24165064_24165156_24166578_24166703_24167328_24167446_24170326_24170454_24171408_24171499_24172375_24172484_24178012_24178196_24179737_24179836_24181144_24181280_24196124_24196201_24225041_24225199_24239219_24239383_24280841_24280949_24303636_24303719_24311983_24312107_24314248_24314348_24317148_24317213_24317326_24317401_24318600_24318646_24318747_24318810_24332941_24333087_24334244_24334331_24341546_24341659_24366891_24366967_24368286_24368373_24377412_24377536_24397654
H1_mix_00041704	chr18	-	1888	5	NNC	ENSG00000141447.19	novel	1887	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	126.175225381213	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTCTCATCATTTTTC	-35	True	NA	-13	True	AATAAA	-15	NA	24397855	24357124	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_24358512_24366891_24366983_24368286_24368373_24377412_24377536_24397654
H1_mix_00041705	chr18	-	1833	5	NIC	ENSG00000141447.19	novel	1887	5	NA	NA	4	-3	combination_of_known_junctions	FALSE	canonical	3	105	junction_1	79.6821811950451	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACTTGTCTCATCATTT	1	True	NA	-16	True	AATAAA	-12	NA	24397819	24357127	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_24358512_24366891_24366967_24368286_24368373_24377412_24377536_24397654
H1_mix_00041706	chr18	-	4889	8	FSM	ENSG00000198795.11	ENST00000361524.8	4887	8	0	-2	0	2	multi-exon	FALSE	canonical	3	36	junction_7	13.7306450046929	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTATTTGTGTGTTTT	-5	True	NA	1	True	AATAAA	-20	NA	25352166	25061921	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_25062742_25089464_25089581_25091949_25092082_25195159_25195245_25224344_25227698_25322007_25322188_25350906_25350948_25352004
H1_mix_00041707	chr18	-	4501	11	FSM	ENSG00000141380.14	ENST00000415083.7	3402	11	15	-1114	0	1114	multi-exon	TRUE	canonical	3	86	junction_3	240.498669434989	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCTTTCATTTTAAAAAG	13	True	NA	NA	False	NA	NA	NA	26090598	26015138	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_26018381_26032398_26032533_26035004_26035128_26035830_26035924_26038554_26038660_26039288_26039457_26052623_26052846_26057588_26057743_26078075_26078161_26087500_26087578_26090500
H1_mix_00041708	chr18	-	2321	11	FSM	ENSG00000141380.14	ENST00000542420.6	2321	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_10	287.451995992374	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGACTTTACAAACCTTTG	-17	True	NA	-13	True	ATTAAA	-13	NA	26091217	26017342	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_26018381_26032398_26032533_26035004_26035128_26035830_26035924_26038554_26038660_26039288_26039457_26052623_26052846_26057588_26057743_26078075_26078161_26087500_26087578_26091095
H1_mix_00041709	chr18	-	1753	10	FSM	ENSG00000141380.14	ENST00000269137.11	1836	10	90	-7	90	0	multi-exon	TRUE	canonical	3	511	junction_3	68.7509371428833	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTTTTCCACAGATTTT	389	False	NA	NA	False	NA	NA	NA	26090811	26018006	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_26018381_26032398_26032533_26035004_26035128_26038554_26038660_26039288_26039457_26052623_26052846_26057588_26057743_26078075_26078161_26087500_26087578_26090500
H1_mix_00041715	chr18	-	559	1	FSM	ENSG00000188985.6	ENST00000579682.1	559	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	191	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATGAAGGTGTTTTCTA	68	False	NA	NA	False	NA	NA	NA	26171284	26170725	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_26170700_26171300
H1_mix_00041716	chr18	-	356	1	FSM	ENSG00000263829.1	ENST00000578364.1	658	1	-57	359	-57	-359	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATAAAGAGCAACCATAT	NA	False	NA	NA	False	AAGAAA	-19	NA	26256412	26256056	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_26256100_26256400
H1_mix_00041717	chr18	-	3413	5	FSM	ENSG00000134504.14	ENST00000580059.7	3448	5	35	0	35	0	multi-exon	TRUE	canonical	3	6	junction_4	9.86154146165801	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCCGTGTTGAGCATCAA	1253	False	NA	3	True	ATTAAA	-23	NA	26548518	26454909	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_26455902_26459619_26459926_26476514_26476660_26501071_26501251_26546727
H1_mix_00041719	chr18	-	4918	4	FSM	ENSG00000171885.18	ENST00000581374.5	1586	4	442	-3774	0	0	multi-exon	FALSE	canonical	3	15	junction_2	2.86744175568088	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGTTTGATGAAGTTA	3364	False	NA	-11	True	AATAAA	-25	NA	26862406	26852042	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_26856490_26860771_26860853_26861130_26861296_26862181
H1_mix_00041720	chr18	-	11616	6	FSM	ENSG00000154080.14	ENST00000618847.5	11379	6	-56	-181	-56	181	multi-exon	FALSE	canonical	3	212	junction_1	73.053405122554	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGTTCCTGCATTCATAT	97	False	NA	NA	False	AAGAAA	-25	NA	27185364	26906299	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_26917351_26944328_26944367_27024115_27024158_27048464_27048504_27142688_27142906_27185135
H1_mix_00041721	chr18	-	2043	5	FSM	ENSG00000154080.14	ENST00000581714.5	2043	5	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	80.9826370279457	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTGGACTTAGGCATT	10	True	NA	-3	True	GATAAA	-15	NA	27143038	26915776	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_26917351_26944328_26944367_27024115_27024158_27048464_27048504_27142688
H1_mix_00041722	chr18	-	2035	5	FSM	ENSG00000154080.14	ENST00000580774.2	2033	5	0	-2	0	0	multi-exon	FALSE	canonical	3	94	junction_1	121.520317231317	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTGGACTTAGGCATT	1	True	NA	-3	True	GATAAA	-15	NA	27185298	26915776	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_26917351_27024115_27024158_27048464_27048504_27142688_27142906_27185135
H1_mix_00041723	chr18	-	2145	7	NNC	ENSG00000154080.14	novel	11379	6	NA	NA	-39	-72	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	161.305782771591	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAACTGTTGAATTGTTTT	-5	True	NA	-25	True	AATATA	-26	NA	27185347	26915850	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_26917351_26944328_26944367_26978655_26978753_27024115_27024158_27048464_27048504_27142688_27142906_27185135
H1_mix_00041724	chr18	-	1734	6	NNC	ENSG00000154080.14	novel	2043	5	NA	NA	16	-388	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	168.543169544185	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACCAAGTGCAGTTGTCT	26	False	NA	-9	True	NA	NA	NA	27143022	26916166	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_26917351_26944328_26944367_26978655_26978753_27024115_27024158_27048464_27048504_27142688
H1_mix_00041725	chr18	-	5000	17	NNC	ENSG00000170558.10	novel	3143	17	NA	NA	-141	5642	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	219.072726223508	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCCTTCCTGGAAAGTAT	NA	False	NA	NA	False	NA	NA	NA	28178087	27945323	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_27945352_27950966_27952360_27963356_27963522_27982943_27983084_27984999_27985234_27985527_27985762_27988523_27988667_27990096_27990351_27992654_27992841_27993499_27993638_28002996_28003170_28005848_28005994_28009716_28009873_28011845_28011993_28013682_28013910_28147672_28147785_28176962
H1_mix_00041726	chr18	-	6531	16	FSM	ENSG00000170558.10	ENST00000269141.8	4016	16	-957	-1558	-141	1558	multi-exon	FALSE	canonical	3	771	junction_11	59.2315981737976	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTTGTGCATGTCTCTT	NA	False	NA	-16	True	ATTAAA	-18	NA	28178087	27949407	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_27952360_27963356_27963522_27982943_27983084_27984999_27985234_27985527_27985762_27988523_27988667_27990096_27990351_27992654_27992841_27993499_27993638_28002996_28003170_28005848_28005994_28009716_28009873_28011845_28011993_28013682_28013910_28147672_28147785_28176962
H1_mix_00041728	chr18	-	3243	16	FSM	ENSG00000170558.10	ENST00000676445.1	3243	16	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_15	225.284353651114	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTAGACTTTAGTTTGT	-5	True	NA	-24	True	NA	NA	NA	28177946	27951654	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_27952360_27963356_27963522_27982943_27983084_27984999_27985234_27985527_27985762_27988523_27988667_27990096_27990351_27992654_27992841_27993499_27993638_28002996_28003170_28005848_28005994_28009716_28009873_28011845_28011993_28013682_28013910_28147672_28147785_28177862
H1_mix_00041729	chr18	-	249	1	FSM	ENSG00000274578.1	ENST00000621223.1	471	1	184	38	184	-38	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAATTCAGACAGATAATAA	NA	False	NA	-50	True	TATAAA	-24	NA	28146519	28146270	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_28146300_28146500
H1_mix_00041730	chr18	-	7583	16	FSM	ENSG00000134762.17	ENST00000360428.9	7583	16	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_1	4.02437020607642	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGCCTTGTGTGTCTGGC	4	True	NA	NA	False	TATAAA	-15	NA	31042742	30989364	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_30994373_30996790_30997049_31001617_31001740_31004141_31004367_31006906_31007132_31008015_31008159_31008268_31008526_31018070_31018257_31018665_31018801_31022335_31022503_31024348_31024494_31025759_31025916_31029508_31029629_31030972_31031173_31032191_31032277_31042591
H1_mix_00041731	chr18	-	12331	16	FSM	ENSG00000134755.18	ENST00000280904.11	12331	16	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_13	32.0883502570983	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTAATGGAATGTTCTTA	10	True	NA	NA	False	ATTAAA	-16	NA	31102421	31058839	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_31068213_31068893_31069152_31070725_31070851_31071604_31071842_31074682_31074908_31079846_31079990_31080095_31080353_31082237_31082424_31082925_31083061_31086575_31086743_31087668_31087814_31089438_31089595_31091027_31091148_31092100_31092301_31093558_31093644_31101902
H1_mix_00041732	chr18	-	12377	17	FSM	ENSG00000134755.18	ENST00000251081.8	12377	17	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_2	62.709118904271	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTAATGGAATGTTCTTA	10	True	NA	NA	False	ATTAAA	-16	NA	31102421	31058839	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_31068213_31068298_31068345_31068893_31069152_31070725_31070851_31071604_31071842_31074682_31074908_31079846_31079990_31080095_31080353_31082237_31082424_31082925_31083061_31086575_31086743_31087668_31087814_31089438_31089595_31091027_31091148_31092100_31092301_31093558_31093644_31101902
H1_mix_00041733	chr18	-	5173	16	NNC	ENSG00000134755.18	novel	12331	16	NA	NA	12	21	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_13	70.6482994998621	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACATGTACAATTCATT	22	False	NA	51	True	AATAAA	-13	NA	31102409	31065976	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_31068213_31068893_31069152_31070725_31070851_31071604_31071842_31074682_31074908_31079846_31079990_31080095_31080353_31082237_31082424_31082925_31083061_31086575_31086743_31087668_31087814_31089438_31089595_31091027_31091139_31092100_31092301_31093558_31093644_31101902
H1_mix_00041734	chr18	-	7126	3	Intergenic	novelGene_597	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_2	0.5	26	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATTCTTGGTTTTCTTTT	NA	False	NA	-3	True	AATAAA	-19	NA	31289585	31273346	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr18_-_31280178_31280574_31280663_31289378
H1_mix_00041735	chr18	-	5740	9	FSM	ENSG00000118276.12	ENST00000306851.10	4672	9	-1068	0	187	0	multi-exon	FALSE	canonical	3	52	junction_5	17.5957203603604	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTGTGAAGATGTAATT	NA	False	NA	-9	True	AATATA	-13	NA	31685649	31622245	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_31625762_31626282_31626385_31626998_31627122_31630958_31631147_31638643_31638761_31645354_31645480_31657975_31658090_31666255_31666373_31684311
H1_mix_00041737	chr18	-	6230	29	FSM	ENSG00000153339.15	ENST00000283351.10	6230	29	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_16	24.2487902075673	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTCCTGAATATTACTC	-14	True	NA	-10	True	AATAAA	-20	NA	31943128	31829196	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_31830990_31832083_31832174_31839311_31839458_31846715_31846818_31849565_31849740_31852445_31852505_31852594_31852664_31853848_31853946_31855659_31855808_31857539_31857983_31864626_31864782_31866848_31866976_31867401_31867477_31870371_31870503_31870925_31871121_31873429_31873539_31874479_31874705_31890734_31890867_31897785_31897892_31900924_31901026_31907459_31907611_31908302_31908419_31908753_31909011_31909666_31909761_31913368_31913523_31916271_31916447_31917577_31917668_31931328_31931524_31942607
H1_mix_00041738	chr18	-	623	3	FSM	ENSG00000153339.15	ENST00000581057.2	623	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	110	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGACTGAGAATACTTAACA	NA	False	NA	NA	False	NA	NA	NA	31839457	31830597	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_31830985_31832083_31832174_31839311
H1_mix_00041739	chr18	-	4615	30	NNC	ENSG00000153339.15	novel	5014	30	NA	NA	0	-48	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_29	38.9231994803658	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGCAAAATACTTTGACTT	8	True	NA	NA	False	NA	NA	NA	31943106	31830645	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_31830990_31832083_31832174_31839311_31839458_31846715_31846818_31849565_31849740_31852445_31852505_31852594_31852664_31853848_31853946_31855659_31855808_31857539_31857983_31864626_31864782_31866848_31866976_31867401_31867477_31870371_31870503_31870925_31871121_31873429_31873539_31874479_31874705_31890734_31890867_31897785_31897892_31900924_31901026_31907459_31907611_31908302_31908419_31908753_31909011_31909666_31909761_31913368_31913523_31916271_31916447_31917577_31917668_31931328_31931524_31942607_31942894_31943037
H1_mix_00041740	chr18	-	4657	29	NNC	ENSG00000153339.15	novel	6230	29	NA	NA	-10	160	intron_retention	FALSE	canonical	3	22	junction_23	39.9467119537812	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGACAACTTGGAAATTT	-2	True	NA	NA	False	NA	NA	NA	31943116	31830760	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_31830990_31832083_31832174_31839311_31839458_31846715_31846818_31849565_31849740_31852445_31852505_31852594_31852664_31853848_31853946_31855659_31855808_31857539_31857983_31864626_31864782_31866848_31866976_31867401_31867477_31870371_31870503_31870925_31871121_31873429_31873539_31874479_31874705_31890734_31890867_31897785_31897892_31900924_31901026_31907459_31907611_31908302_31908419_31908753_31909014_31909666_31909761_31913368_31913523_31916271_31916447_31917577_31917668_31931328_31931524_31942607
H1_mix_00041742	chr18	-	477	1	FSM	ENSG00000276282.1	ENST00000616300.1	666	1	37	152	37	-152	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTCAGAAGTGATATTTAA	NA	False	NA	NA	False	NA	NA	NA	31896373	31895896	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_31895900_31896400
H1_mix_00041743	chr18	-	7034	6	FSM	ENSG00000141441.16	ENST00000399218.8	7033	6	0	-1	0	1	multi-exon	FALSE	canonical	3	14	junction_1	8.56971411425142	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTGCAGTTGTTCCTC	432	False	NA	0	True	AATAAA	-18	NA	32470484	32263520	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_32268766_32270216_32270384_32287030_32288204_32310192_32310324_32392894_32393036_32470307
H1_mix_00041744	chr18	-	963	1	FSM	ENSG00000215492.6	ENST00000521273.1	963	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGGAAACAAAGCTTAGCA	56	False	NA	NA	False	NA	NA	NA	32413176	32412213	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_32412200_32413200
H1_mix_00041745	chr18	-	3924	8	ISM	ENSG00000197705.10	ENST00000359358.9	4271	9	2382	-3	1526	3	3prime_fragment	FALSE	canonical	2	4	junction_7	2.99659670905758	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTCTCTCATATCCTAC	2514	False	NA	-7	True	AATAAA	-19	NA	32770641	32672669	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr18_-_32674798_32677172_32677331_32680168_32680328_32680408_32680600_32687154_32687234_32695462_32695553_32741927_32742050_32769644
H1_mix_00041746	chr18	-	761	4	NIC	ENSG00000186814.14	novel	4122	4	NA	NA	11	-898	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	5.90668171555645	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTGATGGCAAAGCAAGAAA	11	True	NA	NA	False	NA	NA	NA	35290210	35254356	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_35254382_35263512_35263658_35263944_35264456_35290130
H1_mix_00041747	chr18	-	7433	3	FSM	ENSG00000172466.16	ENST00000589881.5	7419	3	0	-14	0	14	multi-exon	FALSE	canonical	2	3	junction_1	124.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTGCCATTTGTTACTC	3817	False	NA	-6	True	AATAAA	-35	NA	35340654	35332212	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_35339074_35339828_35339977_35340230
H1_mix_00041748	chr18	-	6274	4	FSM	ENSG00000172466.16	ENST00000261332.11	6256	4	0	-18	0	18	multi-exon	FALSE	canonical	3	36	junction_3	103.022111973865	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCATTTGTTACTCCATT	17	True	NA	-2	True	AATAAA	-39	NA	35344420	35332208	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_35337771_35339828_35339977_35340230_35340734_35344359
H1_mix_00041749	chr18	-	6300	4	FSM	ENSG00000172466.16	ENST00000399061.3	6282	4	0	-18	0	18	multi-exon	FALSE	canonical	3	238	junction_3	8.04155872120988	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCATTTGTTACTCCATT	15	False	35344471	-2	True	AATAAA	-39	NA	35344456	35332208	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_35337771_35339828_35339977_35340230_35340734_35344369
H1_mix_00041750	chr18	-	297	2	Intergenic	novelGene_599	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	0	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTTCAAAGGCCTGTT	NA	False	NA	NA	False	NA	NA	NA	35361388	35359446	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr18_-_35359591_35361235
H1_mix_00041751	chr18	-	3659	4	FSM	ENSG00000186496.12	ENST00000589332.7	3661	4	2	0	2	0	multi-exon	FALSE	canonical	3	10	junction_3	2.62466929133727	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTATTGTTTTCTGGCTT	-15	True	NA	NA	False	AGTAAA	-16	NA	35377335	35366693	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_35369661_35373455_35373601_35373875_35374365_35377277
H1_mix_00041752	chr18	-	2719	5	FSM	ENSG00000186496.12	ENST00000306346.5	2788	5	0	69	0	-69	multi-exon	FALSE	canonical	1	1	junction_1	5.40832691319598	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGTTTTAAAAATTAGCAT	-17	True	NA	NA	False	TATAAA	-23	NA	35377337	35366765	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_35368446_35369315_35369661_35373455_35373601_35373875_35374365_35377277
H1_mix_00041753	chr18	-	457	3	FSM	ENSG00000267140.1	ENST00000589258.1	455	3	0	-2	0	2	multi-exon	FALSE	canonical	2	11	junction_2	4	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTATGGTATTTTGG	4	True	NA	0	True	AATAAA	-19	NA	35497940	35443868	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_35444023_35446874_35446956_35497718
H1_mix_00041754	chr18	-	3243	5	FSM	ENSG00000153391.16	ENST00000592173.5	3245	5	0	2	0	-2	multi-exon	FALSE	canonical	2	18	junction_1	109.245995349944	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAAACTTCACTTGGTCA	11	True	NA	-11	True	AATAAA	-18	NA	35497933	35452231	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_35454969_35478281_35478350_35479299_35479412_35480452_35480564_35497718
H1_mix_00041755	chr18	-	952	5	FSM	ENSG00000153391.16	ENST00000334598.12	943	5	0	-9	0	9	multi-exon	FALSE	canonical	3	234	junction_1	18.7533330370897	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAATTTTTGTTTTAAAG	-16	True	NA	5	True	AATAAA	-27	NA	35497960	35468323	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_35468743_35478281_35478350_35479299_35479412_35480452_35480564_35497718
H1_mix_00041756	chr18	-	382	3	FSM	ENSG00000153391.16	ENST00000587450.1	382	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	111	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTGACGTCGTCACCGG	-16	True	NA	NA	False	NA	NA	NA	35497960	35468670	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_35468743_35478281_35478350_35497718
H1_mix_00041758	chr18	-	719	1	FSM	ENSG00000279074.1	ENST00000622938.1	237	1	-21	-461	-21	461	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATCCCAAGGGAAGTAGAA	NA	False	NA	NA	False	NA	NA	NA	35483688	35482969	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_35483000_35483700
H1_mix_00041760	chr18	-	1947	9	FSM	ENSG00000141425.18	ENST00000590898.5	1945	9	0	-2	0	2	multi-exon	FALSE	canonical	3	44	junction_7	305.076937017533	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTTTTGTGAATCTGAT	24	True	NA	0	True	AATAAA	-27	NA	36067530	35989821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_35990596_35993101_35993301_36026899_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36040806_36040866_36067253
H1_mix_00041761	chr18	-	4423	7	FSM	ENSG00000141425.18	ENST00000399022.9	4421	7	0	-2	0	2	multi-exon	FALSE	canonical	3	506	junction_1	88.6655701686587	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTTTTGTGAATCTGAT	-5	True	NA	0	True	AATAAA	-27	NA	36067559	35989821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_35993301_36026899_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36067253
H1_mix_00041762	chr18	-	1850	8	FSM	ENSG00000141425.18	ENST00000357384.8	1850	8	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	220.065852852815	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGTATCTGATGACAGTA	-2	True	NA	-64	True	NA	NA	NA	36067556	35989885	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_35990596_35993101_35993301_36026899_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36067253
H1_mix_00041763	chr18	-	4438	8	FSM	ENSG00000141425.18	ENST00000588737.5	1264	8	-20	-3154	-3	0	multi-exon	FALSE	canonical	3	44	junction_6	291.551934674159	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGTATCTGATGACAGTA	-25	True	NA	-64	True	NA	NA	NA	36067579	35989885	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_35993301_36026899_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36040806_36040866_36067253
H1_mix_00041764	chr18	-	1024	7	FSM	ENSG00000141425.18	ENST00000589050.1	1022	7	0	-2	0	2	multi-exon	FALSE	canonical	3	22	junction_1	255.899340019122	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTATTGTCTCATGTTT	-3	True	NA	-30	True	AATAAA	-15	NA	36067557	36025596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_36025679_36026899_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36067253
H1_mix_00041765	chr18	-	3408	6	ISM	ENSG00000141425.18	ENST00000357384.8	1850	8	0	34547	0	456	5prime_fragment	FALSE	canonical	3	626	junction_5	60.2547923405267	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATCTCAGCACTTTGGG	-2	True	NA	NA	False	NA	NA	NA	36067556	36024432	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr18_-_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36067253
H1_mix_00041766	chr18	-	3566	10	FSM	ENSG00000141424.13	ENST00000269187.10	3566	10	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_8	28.4179564169132	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCAGATGTCTGGTTTTCT	21	True	NA	-6	True	AATAAA	-19	NA	36129340	36108530	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_36109746_36111058_36111250_36112500_36112582_36114096_36114475_36116673_36116780_36122051_36122271_36123494_36123665_36124519_36124701_36126218_36127017_36129113
H1_mix_00041768	chr18	-	609	2	FSM	ENSG00000260552.2	ENST00000568654.2	620	2	11	0	2	0	multi-exon	FALSE	canonical	3	10	junction_1	0	145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACAATTTTTTTTCACA	-17	True	NA	NA	False	AATAAA	-30	NA	36187448	36179995	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_36180391_36187234
H1_mix_00041769	chr18	-	2750	1	FSM	ENSG00000267456.2	ENST00000593113.2	385	1	-2384	19	-2384	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	302	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAATAAGGACCACAGCTA	NA	False	NA	NA	False	AATAAA	-31	NA	36281503	36278753	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_36278800_36281500
H1_mix_00041771	chr18	-	1881	8	NNC	ENSG00000134779.15	novel	3835	7	NA	NA	0	22249	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	430.924066420533	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGCTTTTAACTGTGGG	13	True	NA	NA	False	NA	NA	NA	36828986	36755397	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_36755426_36796073_36797051_36798448_36798610_36800197_36800312_36805373_36805503_36807846_36807935_36818893_36818974_36828682
H1_mix_00041772	chr18	-	1909	8	NNC	ENSG00000134779.15	novel	3835	7	NA	NA	0	22249	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	430.924066420533	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGCTTTTAACTGTGGG	-12	True	NA	NA	False	NA	NA	NA	36829011	36755397	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_36755426_36796070_36797051_36798448_36798610_36800197_36800312_36805373_36805503_36807846_36807935_36818893_36818974_36828682
H1_mix_00041773	chr18	-	1225	7	FSM	ENSG00000134779.15	ENST00000614939.4	1268	7	43	0	43	0	multi-exon	FALSE	canonical	3	36	junction_1	451.853098055355	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGGTGTACATGTATG	NA	False	NA	0	True	AATAAA	-43	NA	36829173	36780026	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_36780189_36798448_36798610_36800197_36800312_36805373_36805503_36807846_36807935_36818893_36818974_36828682
H1_mix_00041774	chr18	-	1239	7	FSM	ENSG00000134779.15	ENST00000590842.5	1239	7	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_1	396.556322187236	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAGCCAAGGGTTAAGTC	-1	True	NA	-8	True	AATAAA	-16	NA	36828842	36786572	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_36787080_36798448_36798610_36800197_36800312_36805373_36805503_36807846_36807935_36818893_36818974_36828682
H1_mix_00041775	chr18	-	4172	1	Genic_Genomic	ENSG00000134779.15	novel	NA	NA	NA	NA	6566	845	mono-exon	FALSE	NA	NA	NA	NA	NA	279	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTATTGAGGTGGCATTT	6471	False	NA	NA	False	NA	NA	NA	36792019	36787847	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr18_-_36787800_36792000
H1_mix_00041776	chr18	-	3841	7	FSM	ENSG00000134779.15	ENST00000334295.9	3835	7	0	-6	0	6	multi-exon	FALSE	canonical	3	998	junction_1	99.5020937803153	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTTACTATTCATCTTT	-3	True	NA	-2	True	ACTAAA	-26	NA	36829002	36794101	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_36797051_36798448_36798610_36800197_36800312_36805373_36805503_36807846_36807935_36818893_36818974_36828682
H1_mix_00041777	chr18	-	1726	6	FSM	ENSG00000134779.15	ENST00000383056.7	1726	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	476.304356478082	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCCAGTGAAGTTTCTT	13	True	NA	-26	True	TATAAA	-17	NA	36828986	36796071	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_36797051_36798448_36798610_36800197_36800312_36807846_36807935_36818893_36818974_36828682
H1_mix_00041778	chr18	-	1102	6	FSM	ENSG00000134779.15	ENST00000589049.5	1102	6	0	0	0	0	multi-exon	FALSE	canonical	3	1209	junction_2	42.3650799597971	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGGTGTTCCTTTTTTC	13	True	NA	-19	True	CATAAA	-14	NA	36828781	36798017	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_36798610_36800197_36800312_36805373_36805503_36807846_36807935_36818893_36818974_36828682
H1_mix_00041780	chr18	-	2306	4	FSM	ENSG00000267374.3	ENST00000591629.2	2313	4	7	0	-2	0	multi-exon	FALSE	canonical	1	5	junction_1	17.5182444579612	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTGTATTTTCTGTTT	-19	True	NA	2	True	AATAAA	-22	NA	39800311	39206916	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_39208790_39535457_39535616_39751328_39751361_39800068
H1_mix_00041781	chr18	-	1556	4	FSM	ENSG00000267374.3	ENST00000662708.1	1559	4	3	0	-2	0	multi-exon	FALSE	canonical	0	0	junction_1	19.8662192343351	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTGTATTTTCTGTTT	-19	True	NA	2	True	AATAAA	-22	NA	39800311	39206916	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_39208040_39535457_39535616_39751328_39751361_39800068
H1_mix_00041782	chr18	-	1655	5	FSM	ENSG00000267374.3	ENST00000670992.1	1665	5	10	0	-2	0	multi-exon	FALSE	canonical	0	0	junction_1	18.389874931603	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTGTATTTTCTGTTT	-19	True	NA	2	True	AATAAA	-22	NA	39800311	39206916	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_39208040_39388428_39388528_39535457_39535616_39751328_39751361_39800068
H1_mix_00041784	chr18	-	614	4	FSM	ENSG00000267374.3	ENST00000666181.1	615	4	3	-2	-2	0	multi-exon	FALSE	canonical	0	0	junction_1	19.8662192343351	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTGCAGTGGTTCTTTC	-19	True	NA	NA	False	AATAAA	-20	NA	39800311	39348576	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_39348758_39535457_39535616_39751328_39751361_39800068
H1_mix_00041786	chr18	-	1023	6	NIC	ENSG00000267313.7	novel	704	5	NA	NA	15	-1648	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	5.46260011349906	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTGCCATGCTCTGGG	NA	False	NA	4	True	AATAAA	-16	NA	41632170	41467430	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_41467781_41481881_41481958_41482444_41482578_41501119_41501277_41516419_41516556_41631999
H1_mix_00041789	chr18	-	628	1	Genic_Genomic	ENSG00000152214.14	novel	NA	NA	NA	NA	230253	12	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTAGCTTCATTTGGTA	NA	False	NA	3	True	AATAAA	-34	NA	42743842	42743214	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr18_-_42743200_42743800
H1_mix_00041790	chr18	-	3962	4	FSM	ENSG00000132872.12	ENST00000255224.8	3936	4	-23	-3	-14	3	multi-exon	FALSE	canonical	3	68	junction_2	7.87400787401181	211	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCAATGCAGACTTTCTG	-3	True	NA	-10	True	AATAAA	-21	NA	43277513	43267888	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_43270649_43271711_43271833_43273579_43274395_43277247
H1_mix_00041791	chr18	-	771	1	Genic_Genomic	ENSG00000267414.1	novel	NA	NA	NA	NA	-164	-2184	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACACTGCCACTATCTGA	818	False	NA	NA	False	NA	NA	NA	44679881	44679110	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr18_-_44679100_44679900
H1_mix_00041792	chr18	-	12690	44	FSM	ENSG00000152223.15	ENST00000282041.11	12688	44	0	-2	0	2	multi-exon	TRUE	canonical	2	9	junction_25	6.34385186325729	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCGGGCCTGTCTCATT	-28	True	NA	1	True	AATAAA	-23	NA	45967329	45847606	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_45852650_45855572_45855688_45857852_45858069_45858565_45858783_45860103_45860347_45865614_45865760_45866797_45867008_45867562_45867749_45870566_45870743_45876235_45876343_45878375_45878449_45879012_45879215_45880074_45880224_45882273_45882488_45884616_45884812_45887750_45887908_45889797_45889941_45899403_45899567_45900995_45901168_45903972_45904118_45907957_45908082_45910520_45910743_45912289_45912457_45913705_45913829_45915510_45915622_45916008_45916207_45916437_45916583_45917678_45917820_45922340_45922601_45923267_45923388_45925737_45925903_45928868_45929010_45930675_45930831_45934808_45934967_45939599_45939756_45943160_45943312_45944004_45944120_45946662_45946769_45948502_45948577_45949483_45949592_45951101_45951239_45952399_45952644_45954393_45955339_45967176
H1_mix_00041793	chr18	-	12685	44	NNC	ENSG00000152223.15	novel	12688	44	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_10	6.57444780803149	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGGCGGGCCTGTCTCA	-28	True	NA	-1	True	AATAAA	-21	NA	45967329	45847608	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_45852650_45855572_45855688_45857852_45858069_45858565_45858783_45860103_45860347_45865614_45865760_45866797_45867008_45867562_45867749_45870566_45870743_45876235_45876340_45878375_45878449_45879012_45879215_45880074_45880224_45882273_45882488_45884616_45884812_45887750_45887908_45889797_45889941_45899403_45899567_45900995_45901168_45903972_45904118_45907957_45908082_45910520_45910743_45912289_45912457_45913705_45913829_45915510_45915622_45916008_45916207_45916437_45916583_45917678_45917820_45922340_45922601_45923267_45923388_45925737_45925903_45928868_45929010_45930675_45930831_45934808_45934967_45939599_45939756_45943160_45943312_45944004_45944120_45946662_45946769_45948502_45948577_45949483_45949592_45951101_45951239_45952399_45952644_45954393_45955339_45967176
H1_mix_00041794	chr18	-	3000	15	FSM	ENSG00000152229.18	ENST00000409746.5	3000	15	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	4.57644813704038	184	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTCGTATTTTTGTGT	13	True	NA	-2	True	AATAAA	-20	NA	46072260	45983535	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_45985451_45988701_45988760_45990721_45990757_45991901_45991984_45992105_45992203_45993604_45993704_45997748_45997829_45998793_45998840_45999435_45999535_46005468_46005532_46011180_46011288_46015902_46015938_46024608_46024687_46039946_46040048_46072155
H1_mix_00041796	chr18	-	5560	12	FSM	ENSG00000152234.16	ENST00000398752.11	5761	12	0	201	0	-201	multi-exon	FALSE	canonical	3	5718	junction_8	346.405986435016	1100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTTTTAACCAGGCAGG	-8	True	NA	NA	False	NA	NA	NA	46098296	46080448	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_46084364_46084503_46084655_46086112_46086258_46086386_46086495_46087007_46087233_46087340_46087493_46088108_46088258_46089565_46089733_46089822_46089997_46091681_46091852_46095052_46095132_46098171
H1_mix_00041797	chr18	-	1933	12	FSM	ENSG00000152234.16	ENST00000590156.5	1931	12	0	-2	0	2	multi-exon	FALSE	canonical	1	4	junction_10	1871.69721009596	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTTTTCTGTCATTTGT	-7	True	NA	-14	True	AATAAA	-16	NA	46098295	46084147	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_46084364_46084503_46084655_46086112_46086258_46086386_46086495_46087007_46087233_46087340_46087493_46088108_46088258_46089565_46089733_46089822_46089997_46091681_46091852_46094979_46095132_46098171
H1_mix_00041800	chr18	-	324	2	Antisense	novelGene_ENSG00000141622.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	0	268	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAATGAAAATCCAA	NA	False	NA	NA	False	AATAAA	-8	NA	46433576	46429240	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr18_-_46429415_46433426
H1_mix_00041802	chr18	-	11243	14	FSM	ENSG00000078043.16	ENST00000585916.6	11243	14	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_2	61.9273290465545	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATTGCTTTCATTGGTCA	-23	True	NA	NA	False	ATTAAA	-31	NA	46917507	46803217	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_46812613_46815311_46815350_46820932_46821073_46827958_46828131_46829733_46829868_46836356_46836518_46844053_46844128_46844733_46844840_46846706_46846842_46855344_46855436_46855564_46855616_46864163_46864249_46890579_46891055_46917321
H1_mix_00041803	chr18	-	2043	13	FSM	ENSG00000078043.16	ENST00000398654.7	2043	13	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_11	112.98927554812	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGACTGCAACAAGAACCAAA	30	True	NA	NA	False	NA	NA	NA	46917454	46812279	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_46812613_46815311_46815350_46820932_46821073_46827958_46828131_46829733_46829868_46836356_46836518_46844053_46844128_46844733_46844840_46846706_46846842_46855344_46855436_46855564_46855616_46890579_46891055_46917321
H1_mix_00041804	chr18	-	4543	13	FSM	ENSG00000078043.16	ENST00000324794.11	4543	13	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_1	61.5559817474215	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTTTTTTTTTTAGAT	-19	True	NA	2	True	AATAAA	-24	NA	46917503	46815710	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_46818448_46820932_46821073_46827958_46828131_46829733_46829868_46836356_46836518_46844053_46844128_46844733_46844840_46846706_46846842_46855344_46855436_46855564_46855616_46864163_46864249_46890579_46891055_46917321
H1_mix_00041805	chr18	-	4646	14	NIC	ENSG00000078043.16	novel	4543	13	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	75	junction_13	118.402582732106	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTTTTTTTTTTAGAT	-13	True	NA	2	True	AATAAA	-24	NA	46917497	46815710	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_46818448_46820932_46821073_46827958_46828131_46829733_46829868_46836356_46836518_46844053_46844128_46844733_46844840_46846706_46846842_46855344_46855436_46855564_46855616_46864163_46864249_46890579_46891055_46903526_46903636_46917321
H1_mix_00041806	chr18	-	2154	15	NNC	ENSG00000078043.16	novel	4543	13	NA	NA	0	-38	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	152.009331077713	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTACATATTTAATCATG	30	True	NA	-14	True	ATTAAA	-17	NA	46917454	46818228	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_46818448_46820932_46821073_46827958_46828131_46829733_46829868_46836356_46836518_46844053_46844128_46844733_46844840_46846706_46846842_46855344_46855436_46855564_46855616_46864163_46864249_46890579_46891055_46891642_46891712_46903526_46903636_46917321
H1_mix_00041807	chr18	-	1838	11	FSM	ENSG00000078043.16	ENST00000590127.5	1838	11	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_6	24.8427051667084	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCGTGTGAGGTATTTA	10	True	NA	NA	False	NA	NA	NA	46917474	46827757	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_46828131_46829733_46829868_46836356_46836518_46844053_46844128_46844733_46844840_46846706_46846842_46855344_46855436_46855564_46855616_46864163_46864249_46890579_46891055_46917321
H1_mix_00041808	chr18	-	2253	8	NNC	ENSG00000167220.12	novel	2224	7	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	247.29895978391	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTTTTTGTTTTTGCA	13	True	NA	-7	True	AATAAA	-17	NA	47150467	47107407	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_47108786_47112976_47113041_47115131_47115349_47130243_47130329_47134495_47134705_47136338_47136450_47137234_47137334_47150377
H1_mix_00041809	chr18	-	2224	7	FSM	ENSG00000167220.12	ENST00000588183.5	2224	7	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_5	169.707264298131	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTTTTTGTTTTTGCA	-20	True	NA	-7	True	AATAAA	-17	NA	47150500	47107407	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_47108786_47112976_47113041_47115131_47115349_47130243_47130329_47134495_47134705_47136301_47136450_47150377
H1_mix_00041811	chr18	-	4066	7	NIC	ENSG00000167220.12	novel	2185	7	NA	NA	10739	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	228.348904578547	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTAGTGCATTTGCATA	NA	False	NA	-41	True	AATAAA	-22	NA	47139456	47107627	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_47108786_47112976_47113041_47115131_47115349_47130243_47130329_47134495_47134705_47136338_47136450_47137234
H1_mix_00041816	chr18	-	3564	3	FSM	ENSG00000134049.6	ENST00000256433.6	3679	3	0	115	0	-115	multi-exon	FALSE	canonical	3	785	junction_1	38.5	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTCTGGTCCAGATATA	-28	True	NA	NA	False	NA	NA	NA	47176364	47152948	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_47156233_47157435_47157538_47176186
H1_mix_00041817	chr18	-	34616	11	FSM	ENSG00000175387.16	ENST00000262160.11	34626	11	0	10	0	-10	multi-exon	FALSE	canonical	3	184	junction_10	55.5144125430505	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAAATGAAGCAACGAGAC	-7	True	NA	NA	False	AATAAA	-10	NA	47930659	47808966	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_47841951_47845339_47845485_47845662_47845801_47848474_47848688_47851273_47851328_47865058_47865134_47868322_47868458_47869242_47869437_47870474_47870565_47896520_47896810_47930360
H1_mix_00041818	chr18	-	12075	11	FSM	ENSG00000175387.16	ENST00000402690.6	12075	11	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_10	84.9329147033116	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCAGTTTTTACAGTCT	-15	True	NA	NA	False	AATAAA	-19	NA	47931141	47831550	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_47841951_47845339_47845485_47845662_47845801_47848474_47848688_47851273_47851328_47865058_47865134_47868322_47868458_47869242_47869437_47870474_47870565_47896520_47896810_47930799
H1_mix_00041819	chr18	-	10445	10	FSM	ENSG00000175387.16	ENST00000356825.8	10445	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_8	123.889835571869	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATGGGACTAATTTTTAA	407	False	NA	-18	True	ATTAAA	-30	NA	47931146	47833095	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_47841951_47845339_47845485_47845662_47845801_47848474_47848688_47851273_47851328_47865058_47865134_47868322_47868458_47869242_47869437_47896520_47896810_47930799
H1_mix_00041820	chr18	-	11058	12	NIC	ENSG00000175387.16	novel	12075	11	NA	NA	-437	0	combination_of_known_junctions	FALSE	canonical	3	105	junction_11	84.3607954067107	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATGGGACTAATTTTTAA	NA	False	NA	-18	True	ATTAAA	-30	NA	47931583	47833095	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_47841951_47845339_47845485_47845662_47845801_47848474_47848688_47851273_47851328_47865058_47865134_47868322_47868458_47869242_47869437_47870474_47870565_47896520_47896810_47930360_47930447_47930799
H1_mix_00041821	chr18	-	200	1	FSM	ENSG00000267541.1	ENST00000591258.1	225	1	20	5	20	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTTAGCCTTCCGAGTA	NA	False	NA	NA	False	NA	NA	NA	47853437	47853237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_47853200_47853400
H1_mix_00041824	chr18	-	4426	4	FSM	ENSG00000101665.10	ENST00000262158.8	3341	4	-1094	9	-1094	-9	multi-exon	FALSE	canonical	3	65	junction_3	0.942809041582063	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTTGATTTCATGTTGT	1127	False	NA	-13	True	ATTAAA	-15	NA	48952059	48919861	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_48921911_48942480_48942556_48948383_48948438_48949811
H1_mix_00041826	chr18	-	4909	17	NIC	ENSG00000141627.14	novel	5049	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_9	39.0951863245336	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATACTTGCATTAATTTTG	19	True	NA	-13	True	AATAAA	-20	NA	49460665	49041473	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_49044205_49097401_49097516_49118743_49118927_49163684_49163788_49257009_49257105_49258379_49258494_49272177_49272304_49281996_49282176_49286433_49286614_49331863_49332007_49333727_49333854_49363160_49363234_49378566_49378701_49379664_49379759_49391592_49391646_49430254_49430448_49460397
H1_mix_00041827	chr18	-	5037	17	FSM	ENSG00000141627.14	ENST00000269445.10	5049	17	12	0	12	0	multi-exon	FALSE	canonical	3	160	junction_14	12.2365998136737	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATACTTGCATTAATTTTG	NA	False	NA	-13	True	AATAAA	-20	NA	49460790	49041473	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_49044205_49097401_49097516_49118743_49118927_49163684_49163788_49257009_49257105_49258379_49258494_49272177_49272304_49281996_49282176_49286433_49286617_49331863_49332007_49333727_49333854_49363160_49363234_49378566_49378701_49379664_49379759_49391592_49391646_49430254_49430448_49460397
H1_mix_00041828	chr18	-	5001	18	NIC	ENSG00000141627.14	novel	5049	17	NA	NA	6	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	59.1344137768657	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTATACTTGCATTAATT	25	True	NA	-16	True	AATAAA	-17	NA	49460659	49041476	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_49044205_49097401_49097516_49118743_49118927_49163684_49163788_49257009_49257105_49258379_49258494_49272177_49272304_49281996_49282176_49286433_49286617_49331863_49332007_49333727_49333854_49363160_49363234_49378566_49378701_49379664_49379759_49391592_49391646_49393644_49393743_49430254_49430448_49460397
H1_mix_00041829	chr18	-	2147	12	FSM	ENSG00000141627.14	ENST00000442713.6	2147	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	54.6772649808412	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTATTTTTTTGCATGTTC	19	True	NA	NA	False	NA	NA	NA	49460665	49043668	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_49044205_49097401_49097516_49118743_49118927_49163684_49163788_49257009_49257105_49258379_49258494_49272177_49272304_49281996_49282176_49286433_49286617_49391592_49391646_49430254_49430448_49460397
H1_mix_00041830	chr18	-	784	8	NNC	ENSG00000265681.8	novel	790	7	NA	NA	0	88532	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5548.03098736252	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTCTTTTAAAAAATATT	140	False	NA	NA	False	AATAAA	-5	NA	49492399	49399920	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_49399960_49488483_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49492257
H1_mix_00041831	chr18	-	5548	3	FSM	ENSG00000177576.12	ENST00000318240.8	5548	3	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_2	116.5	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTGAGTTTTTAATTTA	5	True	NA	-1	True	AATAAA	-30	NA	49487234	49477242	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_49482411_49483583_49483772_49487042
H1_mix_00041832	chr18	-	5402	3	FSM	ENSG00000177576.12	ENST00000613385.4	5395	3	0	-7	0	0	multi-exon	FALSE	canonical	3	157	junction_2	155.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTGAGTTTTTAATTTA	-13	True	NA	-1	True	AATAAA	-30	NA	49487252	49477242	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_49482411_49483583_49483772_49487206
H1_mix_00041833	chr18	-	1440	7	FSM	ENSG00000215472.10	ENST00000584895.5	1440	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	6158.54256072183	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAACATTCAGTTTAACTG	953	False	NA	24	True	TATAAA	-42	NA	49491586	49481680	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_49482411_49483583_49483772_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531
H1_mix_00041835	chr18	-	747	8	FSM	ENSG00000265681.8	ENST00000618619.4	747	8	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_6	5676.97325938348	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAGTGTCCTTACAAGAT	57	False	49492512	-1	True	ATTAAA	-39	NA	49492482	49488452	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49491745_49491834_49492457
H1_mix_00041836	chr18	-	523	4	FSM	ENSG00000265681.8	ENST00000584364.5	523	4	0	0	0	0	multi-exon	FALSE	canonical	3	9021	junction_1	2019.83431663755	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGTTGTCTTTATTAGT	1601	False	NA	-29	True	AATAAA	-21	NA	49490938	49488480	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792
H1_mix_00041837	chr18	-	856	8	FSM	ENSG00000265681.8	ENST00000618613.5	856	8	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_7	5734.99141504259	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGTTGTCTTTATTAGT	130	False	NA	-29	True	AATAAA	-21	NA	49492409	49488480	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49491735_49491834_49492257
H1_mix_00041838	chr18	-	614	7	FSM	ENSG00000265681.8	ENST00000580261.6	614	7	0	0	0	0	multi-exon	FALSE	canonical	3	7848	junction_6	2323.29139727815	1307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGTTGTCTTTATTAGT	-14	True	NA	-29	True	AATAAA	-21	NA	49492465	49488480	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49492457
H1_mix_00041839	chr18	-	859	6	FSM	ENSG00000265681.8	ENST00000579408.5	859	6	0	0	0	0	multi-exon	FALSE	canonical	3	9021	junction_1	1717.09226310062	1463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTTGGTTGTCTTTATT	699	False	NA	-32	True	AATAAA	-18	NA	49491840	49488483	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531
H1_mix_00041841	chr18	-	858	7	NNC	ENSG00000265681.8	novel	758	8	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	6049.29999853059	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTTGGTTGTCTTTATT	8	True	NA	-32	True	AATAAA	-18	NA	49492443	49488483	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490957_49491531_49491585_49491735_49491834_49492274
H1_mix_00041842	chr18	-	790	7	FSM	ENSG00000265681.8	ENST00000579248.5	790	7	0	0	0	0	multi-exon	FALSE	canonical	3	1237	junction_6	4462.93919096174	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTTGGTTGTCTTTATT	7	True	NA	-32	True	AATAAA	-18	NA	49492444	49488483	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49492257
H1_mix_00041843	chr18	-	767	6	NNC	ENSG00000265681.8	novel	684	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	5680.0701615385	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTTGGTTGTCTTTATT	1	True	NA	-32	True	AATAAA	-18	NA	49492450	49488483	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490957_49491531_49491585_49492274
H1_mix_00041844	chr18	-	640	6	NNC	ENSG00000265681.8	novel	584	6	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	4876.4090312442	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTTGGTTGTCTTTATT	6	True	NA	-32	True	AATAAA	-18	NA	49492506	49488483	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490957_49491531_49491585_49492457
H1_mix_00041845	chr18	-	705	6	FSM	ENSG00000265681.8	ENST00000580210.5	705	6	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_5	5131.13864166619	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAGCATTAAAATAAATGT	725	False	NA	-66	True	AGTAAA	-1	NA	49491814	49488517	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491625
H1_mix_00041846	chr18	-	758	8	FSM	ENSG00000265681.8	ENST00000583637.5	758	8	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_7	5730.14217866844	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTGAAGAAACAAAAACTTAT	140	False	NA	-100	True	AAGAAA	-40	NA	49492399	49488551	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49491735_49491834_49492274
H1_mix_00041847	chr18	-	693	7	FSM	ENSG00000265681.8	ENST00000578532.5	684	7	0	-9	0	0	multi-exon	FALSE	canonical	3	1548	junction_6	4354.61053558945	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTGAAGAAACAAAAACTTAT	19	True	NA	-100	True	AAGAAA	-40	NA	49492432	49488551	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49492274
H1_mix_00041848	chr18	-	777	6	FSM	ENSG00000265681.8	ENST00000617346.4	795	6	18	0	0	0	multi-exon	FALSE	canonical	3	402	junction_5	5162.76122244676	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATAAGTAGTTGCTCGG	-14	True	NA	NA	False	AAAAAG	-1	NA	49492465	49489358	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491834_49492457
H1_mix_00041852	chr18	-	827	6	FSM	ENSG00000265681.8	ENST00000580387.5	827	6	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_5	5289.13825117098	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGCTCATGGTCGGATTA	18	True	NA	NA	False	NA	NA	NA	49492433	49489476	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491834_49492257
H1_mix_00041857	chr18	-	593	2	FSM	ENSG00000265681.8	ENST00000581305.1	593	2	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATCAGGGTGTAAGGATG	-28	True	NA	NA	False	AATAAA	-32	NA	49492479	49491262	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_49491834_49492457
H1_mix_00041858	chr18	-	2926	10	FSM	ENSG00000167315.18	ENST00000285093.15	2926	10	0	0	0	0	multi-exon	FALSE	canonical	3	650	junction_9	132.472032920813	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTTTACATATTCT	-7	True	NA	-13	True	AATAAA	-19	NA	49813533	49782163	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_49783932_49785196_49785352_49787290_49787362_49791469_49791600_49792151_49792328_49794279_49794428_49795764_49795882_49797465_49797595_49802686_49802854_49813468
H1_mix_00041859	chr18	-	2978	10	FSM	ENSG00000167315.18	ENST00000587994.5	1657	10	16	-1337	0	-4	multi-exon	FALSE	canonical	3	134	junction_9	285.04831732511	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTGTTTTTTACATA	9	True	NA	-17	True	AATAAA	-15	NA	49813937	49782167	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_49783932_49785196_49785352_49787290_49787362_49791469_49791600_49792151_49792328_49794279_49794428_49795764_49795882_49797465_49797595_49802686_49802854_49813816
H1_mix_00041862	chr18	-	3109	19	FSM	ENSG00000167306.20	ENST00000324581.10	3109	19	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_11	8.29416722019415	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATTTTAAGTTTGATTT	NA	False	NA	-4	True	AATAAA	-16	NA	49902833	49826259	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_49826624_49835343_49835425_49836710_49836886_49837516_49837803_49839143_49839295_49841364_49841455_49843240_49843393_49847145_49847290_49849566_49849661_49853448_49853648_49863226_49863328_49864140_49864381_49872166_49872233_49875686_49875828_49877762_49877883_49878944_49879091_49880370_49880456_49894940_49895175_49902593
H1_mix_00041863	chr18	-	6119	39	NIC	ENSG00000167306.20	novel	9583	40	NA	NA	-85	0	combination_of_known_junctions	TRUE	canonical	3	25	junction_26	9.38751012038804	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATTTTAAGTTTGATTT	4288	False	NA	-4	True	AATAAA	-16	NA	50195232	49826259	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_49826624_49835343_49835425_49836710_49836886_49837516_49837803_49839143_49839295_49841364_49841455_49843240_49843393_49847145_49847290_49849566_49849661_49853448_49853648_49863226_49863328_49864140_49864381_49872166_49872233_49875686_49875828_49877762_49877883_49878944_49879091_49880370_49880456_49894940_49895175_49902593_49902834_49904671_49904829_49906418_49906631_49912061_49912174_49929511_49929599_49936251_49936350_49937244_49937398_49953259_49953344_49954312_49954436_49962265_49962407_49962948_49963031_49974349_49974616_49980443_49980554_49984717_49984826_49990438_49990521_49992287_49992432_50001254_50001412_50036849_50036995_50040142_50040315_50055267_50055379_50194766
H1_mix_00041865	chr18	-	2820	16	FSM	ENSG00000141644.18	ENST00000353909.7	2820	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	75.4045680903278	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTAGTGTTTCTTTTGG	35	True	NA	0	True	TTTAAA	-36	NA	50281476	50268840	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_50269819_50271468_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274185_50274354_50274976_50275046_50275128_50275246_50275599_50275729_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
H1_mix_00041866	chr18	-	3009	17	FSM	ENSG00000141644.18	ENST00000269468.10	3009	17	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	58.5650012806283	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACATGCTTAGTGTTTCT	-12	True	NA	-5	True	TTTAAA	-31	NA	50281523	50268845	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_50269819_50271468_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274185_50274354_50274976_50275046_50275128_50275246_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
H1_mix_00041867	chr18	-	3092	16	FSM	ENSG00000141644.18	ENST00000347968.7	3091	16	0	-1	0	0	multi-exon	FALSE	canonical	3	44	junction_1	64.3368220124888	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACATGCTTAGTGTTTCT	1	True	NA	-5	True	TTTAAA	-31	NA	50281774	50268845	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_50269819_50271468_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274976_50275046_50275128_50275246_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
H1_mix_00041868	chr18	-	2652	17	NIC	ENSG00000141644.18	novel	2473	17	NA	NA	6	-2	combination_of_known_splicesites	FALSE	canonical	3	25	junction_1	57.9886842409793	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGTGAATGGATTTCCAA	6859	False	NA	-24	True	ATTAAA	-20	NA	50281453	50269032	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_50269812_50271468_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274976_50275046_50275128_50275246_50275369_50275445_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
H1_mix_00041869	chr18	-	2773	17	NIC	ENSG00000141644.18	novel	2179	18	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	54.8116091717804	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGTGAATGGATTTCCAA	6841	False	NA	-24	True	ATTAAA	-20	NA	50281471	50269032	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_50269819_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274185_50274354_50274976_50275046_50275128_50275246_50275369_50275445_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
H1_mix_00041874	chr18	-	2280	15	FSM	ENSG00000154832.16	ENST00000412036.6	2280	15	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_7	80.2135224489828	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCTCCACATTGCTGCG	676	False	NA	32	True	AATAAA	-21	NA	50287636	50282342	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_50282740_50282853_50283007_50283264_50283362_50283514_50283565_50283704_50283816_50283893_50284102_50284377_50284563_50284719_50284840_50285001_50285248_50285324_50285352_50285748_50285929_50286021_50286258_50286538_50286640_50286739_50286859_50287586
H1_mix_00041875	chr18	-	2320	15	FSM	ENSG00000154832.16	ENST00000285106.11	2320	15	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_9	30.6980854285669	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCTGTCTCCACATTGC	-7	True	NA	28	True	AATAAA	-17	NA	50287692	50282346	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_50282740_50282853_50283007_50283264_50283362_50283514_50283565_50283704_50283816_50283893_50284102_50284377_50284563_50284731_50284840_50285001_50285248_50285324_50285352_50285748_50285929_50286021_50286258_50286538_50286640_50286739_50286859_50287586
H1_mix_00041876	chr18	-	2420	14	FSM	ENSG00000154832.16	ENST00000673786.1	2423	14	18	-15	18	0	multi-exon	FALSE	canonical	2	8	junction_9	81.8544674782864	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAGCTGTCTCCACATT	18	True	NA	26	True	AATAAA	-15	NA	50287821	50282348	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_50282740_50282853_50283007_50283264_50283362_50283514_50283565_50283704_50283816_50283893_50284102_50284377_50284563_50284731_50284840_50285001_50285248_50285748_50285929_50286021_50286258_50286538_50286640_50286739_50286859_50287586
H1_mix_00041879	chr18	-	474	3	FSM	ENSG00000154832.16	ENST00000586144.1	474	3	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_2	7	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTGGGAGAAGCTGCGG	4521	False	NA	NA	False	NA	NA	NA	50283791	50282906	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_50283007_50283264_50283362_50283514
H1_mix_00041880	chr18	-	838	7	FSM	ENSG00000154832.16	ENST00000586837.1	838	7	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_6	104.382310123252	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCAAGGCCCCGCCGGCC	742	False	NA	NA	False	NA	NA	NA	50287570	50285220	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_50285248_50285324_50285352_50285748_50285929_50286021_50286258_50286538_50286640_50286739_50286859_50287422
H1_mix_00041882	chr18	-	3850	1	FSM	ENSG00000176624.12	ENST00000592416.1	3850	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGCACAGTGTCTTTTTC	1114	False	NA	NA	False	AATAAA	-18	NA	51196759	51192909	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_51192900_51196800
H1_mix_00041883	chr18	-	1183	3	FSM	ENSG00000134046.12	ENST00000583046.1	1182	3	0	-1	0	0	multi-exon	FALSE	canonical	3	427	junction_1	177.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGGAAATACCTTTCATT	16	True	NA	-13	True	AATAAA	-35	NA	54224617	54202679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_54203103_54204997_54205158_54224017
H1_mix_00041884	chr18	-	4029	3	FSM	ENSG00000134046.12	ENST00000398398.6	1237	3	-47	-2745	-25	2745	multi-exon	FALSE	canonical	3	388	junction_1	197	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATCTTGGTGGCAATTTC	71	False	NA	-14	True	AATAAA	-20	NA	54224694	54199934	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_54203127_54204997_54205158_54224017
H1_mix_00041886	chr18	-	7986	20	FSM	ENSG00000196628.20	ENST00000354452.8	8041	20	42	13	0	-13	multi-exon	FALSE	canonical	3	81	junction_3	27.0847648602425	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTAATCTTACATTTTG	-1	True	NA	NA	False	ATTAAA	-4	NA	55588150	55222197	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_55228031_55228220_55228362_55228846_55229077_55232508_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55350358_55350409_55350873_55351004_55403453_55403519_55461018_55461116_55464075_55464138_55585279_55585353_55587044_55587137_55588037
H1_mix_00041887	chr18	-	8204	20	FSM	ENSG00000196628.20	ENST00000356073.8	8317	20	117	-4	23	1	multi-exon	FALSE	canonical	3	65	junction_3	29.5888726558068	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTTAGTATTATATTTG	1334	False	NA	1	True	TATAAA	-18	NA	55588512	55222329	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_55228031_55228220_55228362_55228846_55229077_55232520_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55350358_55350409_55350873_55351004_55403453_55403519_55461018_55461116_55464075_55464138_55585279_55585353_55587044_55587137_55588037
H1_mix_00041893	chr18	-	6857	8	FSM	ENSG00000091164.13	ENST00000217515.11	6840	8	0	-17	0	17	multi-exon	FALSE	canonical	3	789	junction_1	56.4338153078815	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTATAAATTTTGTCCTA	14	True	NA	NA	False	ATTAAA	-33	NA	56638592	56597191	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_56603057_56610992_56611098_56614423_56614597_56616244_56616315_56618003_56618127_56624287_56624462_56626360_56626458_56638342
H1_mix_00041895	chr18	-	2604	4	FSM	ENSG00000258609.3	ENST00000553704.3	2604	4	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	15.121728296285	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTCTAGCAATTCTATT	NA	False	NA	-1	True	AATAAA	-15	NA	57072119	57054557	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_57056251_57057499_57058001_57069809_57070004_57071903
H1_mix_00041896	chr18	-	7677	11	FSM	ENSG00000066926.13	ENST00000262093.11	7689	11	0	12	0	0	multi-exon	FALSE	canonical	3	162	junction_5	18.2493835512326	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTCACACCTACATTATAT	-9	True	NA	NA	False	AGTAAA	-17	NA	57586702	57544388	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_57550847_57551314_57551375_57554259_57554425_57554844_57554953_57559144_57559244_57562873_57562981_57566446_57566582_57571391_57571541_57573245_57573366_57580072_57580200_57586553
H1_mix_00041901	chr18	-	2762	14	FSM	ENSG00000134440.12	ENST00000256854.10	2762	14	0	0	0	0	multi-exon	FALSE	canonical	3	1184	junction_13	132.476636323533	184	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGGCTTAATTTTCTT	-39	True	NA	-26	True	AATAAA	-20	NA	57621836	57600655	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_57601784_57602354_57602487_57602811_57602944_57605856_57605971_57606615_57606752_57607133_57607334_57607443_57607666_57609356_57609444_57611636_57611708_57613601_57613681_57615640_57615731_57615816_57615976_57620568_57620652_57621707
H1_mix_00041904	chr18	-	444	1	FSM	ENSG00000274354.1	ENST00000610389.1	713	1	259	10	259	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAAGCACCTTTGGCTC	1301	False	NA	NA	False	AATAAA	-11	NA	58512051	58511607	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_58511600_58512100
H1_mix_00041905	chr18	-	4825	13	FSM	ENSG00000074695.6	ENST00000251047.6	4824	13	0	-1	0	1	multi-exon	TRUE	canonical	3	535	junction_5	49.6914787016401	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTTTTCCTTCATTGAT	-5	True	NA	-18	True	AATAAA	-18	NA	59359265	59327821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_59331130_59331417_59331540_59333090_59333245_59338556_59338628_59338759_59338954_59345918_59346052_59347512_59347572_59349112_59349237_59353201_59353302_59354518_59354581_59355312_59355421_59355503_59355659_59359030
H1_mix_00041906	chr18	-	3406	12	FSM	ENSG00000183287.14	ENST00000649564.1	6403	12	0	2997	0	1209	multi-exon	FALSE	canonical	0	0	junction_11	8.61576490850799	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGAGACTCTGTCTCATTA	-4	True	NA	NA	False	NA	NA	NA	59697662	59433935	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_59436142_59438110_59438147_59439542_59439579_59439676_59439817_59447982_59448104_59454850_59454952_59466738_59466892_59469472_59469608_59480185_59480239_59696628_59696710_59697211_59697470_59697576
H1_mix_00041908	chr18	-	348	1	FSM	ENSG00000243256.1	ENST00000482744.1	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATGCAAAATTTCCCTTT	70	False	NA	NA	False	NA	NA	NA	61405205	61404857	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_61404900_61405200
H1_mix_00041909	chr18	-	763	2	FSM	ENSG00000267279.3	ENST00000586949.1	653	2	-13	-97	10	-35	multi-exon	FALSE	canonical	3	23	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTCCTAAGGCAAATAAATA	2	True	NA	99	True	NA	NA	NA	61606929	61605970	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_61606655_61606850
H1_mix_00041911	chr18	-	682	3	FSM	ENSG00000176641.11	ENST00000591306.5	682	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGACATGGGCTGCCGCCT	233	False	NA	NA	False	NA	NA	NA	61894231	61816121	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_61816599_61892794_61892918_61894149
H1_mix_00041914	chr18	-	6045	29	FSM	ENSG00000197563.11	ENST00000640876.1	6045	29	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_28	22.6194110246496	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGCCTCCTGGGCTCA	-36	True	NA	NA	False	NA	NA	NA	62187056	62042851	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_62045980_62072672_62072726_62074778_62074822_62082672_62082747_62084530_62084607_62085208_62085265_62088755_62088843_62090475_62090579_62095847_62095951_62101074_62101184_62102793_62102903_62105542_62105635_62106788_62106882_62106985_62107086_62109833_62109974_62113133_62113317_62114560_62114640_62138242_62138299_62138982_62139076_62140419_62140480_62143305_62143347_62145908_62146026_62146970_62147102_62148213_62148339_62154544_62154652_62157128_62157228_62157686_62157809_62161132_62161386_62186843
H1_mix_00041921	chr18	-	5147	10	FSM	ENSG00000119537.18	ENST00000645214.2	5143	10	0	-4	0	4	multi-exon	FALSE	canonical	3	124	junction_7	10.9081462366888	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTAGAAGTTTGTGTT	-7	True	NA	1	True	AATAAA	-33	NA	63367206	63327721	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_63331902_63335256_63335359_63338799_63338884_63344409_63344494_63350887_63351080_63355203_63355300_63355497_63355564_63359735_63359793_63362778_63362869_63367010
H1_mix_00041925	chr18	-	9275	2	FSM	ENSG00000171451.15	ENST00000310045.9	9266	2	0	-9	0	9	multi-exon	FALSE	canonical	3	67	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGGGATAATTTTATCTT	29	True	NA	-1	True	AATAAA	-23	NA	67516720	67506577	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_67515493_67516360
H1_mix_00041927	chr18	-	4737	16	FSM	ENSG00000166479.10	ENST00000299608.7	4737	16	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_7	19.0550080906132	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTCTTATTTTTACTGT	-13	True	NA	0	True	AATAAA	-19	NA	68715108	68673687	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_68677194_68679462_68679532_68680980_68681111_68682924_68682982_68684189_68684244_68684427_68684486_68687666_68687766_68691294_68691362_68697225_68697304_68697931_68698032_68700404_68700486_68701744_68701791_68710020_68710145_68711363_68711404_68713845_68713901_68714935
H1_mix_00041928	chr18	-	599	2	FSM	ENSG00000166479.10	ENST00000578816.1	599	2	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGATCTTTGTGATTAG	NA	False	NA	NA	False	NA	NA	NA	68679577	68676709	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_68677194_68679462
H1_mix_00041929	chr18	-	395	4	FSM	ENSG00000166479.10	ENST00000566135.1	395	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	63.5941995957353	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAGAGCAAAGAACAGCAG	NA	False	NA	NA	False	AATGAA	-17	NA	68681322	68677027	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_68677194_68679462_68679532_68680980_68681111_68681292
H1_mix_00041930	chr18	-	937	8	FSM	ENSG00000166479.10	ENST00000562706.5	937	8	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_4	16.6990162242314	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTTACAAGTGGTGGAT	37	True	NA	NA	False	AATAAA	-36	NA	68715058	68696935	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_68697304_68697931_68698032_68700404_68700486_68701744_68701791_68710020_68710145_68711363_68711404_68713845_68713901_68714935
H1_mix_00041933	chr18	-	6721	11	FSM	ENSG00000166342.19	ENST00000327305.11	6721	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	9.59166304662544	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATTTGTACTCTTTATT	-7	True	NA	-2	True	AATAAA	-23	NA	72867987	72743755	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_72748165_72749013_72749089_72750061_72750621_72756033_72756148_72783677_72783907_72794116_72794245_72794362_72794405_72858825_72859075_72864807_72864946_72865187_72865242_72867263
H1_mix_00041936	chr18	-	3231	5	FSM	ENSG00000166347.19	ENST00000340533.9	3231	5	0	0	0	0	multi-exon	FALSE	canonical	3	1744	junction_2	49.1655367101794	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGGACTTGCCCTGAATT	-2	True	NA	0	True	AATAAA	-18	NA	74291963	74250845	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_74253666_74255740_74255776_74260914_74260945_74263348_74263478_74291746
H1_mix_00041937	chr18	-	501	1	FSM	ENSG00000235297.3	ENST00000474180.1	414	1	-27	-60	-27	60	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAATAATAAAATAAATAA	-1	True	NA	NA	False	AATAAA	-30	NA	74390324	74389823	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_74389800_74390300
H1_mix_00041938	chr18	-	4949	2	FSM	ENSG00000264247.2	ENST00000654728.1	4931	2	0	-18	0	18	multi-exon	FALSE	canonical	3	48	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCCATCTCAAAAAAAAAAAA	-15	True	NA	NA	False	NA	NA	NA	74597835	74590298	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_74593840_74596427
H1_mix_00041941	chr18	-	9166	6	NIC	ENSG00000101493.11	novel	8678	7	NA	NA	-1109	8	intron_retention	FALSE	canonical	3	19	junction_5	14.656056768449	384	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTAAGACATTTTTCCC	65	False	NA	-11	True	AATAAA	-24	NA	76496351	76358188	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_76362558_76370527_76370596_76371466_76371572_76378854_76380304_76441244_76443212_76495143
H1_mix_00041944	chr18	-	4836	4	FSM	ENSG00000197971.16	ENST00000397860.7	4844	4	0	8	0	-8	multi-exon	FALSE	canonical	3	37	junction_1	6.0184900284226	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACTAATTGCATGCGAAC	1432	False	NA	-8	True	ATTAAA	-23	NA	77132769	77012786	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_77017269_77066297_77066386_77105210_77105287_77132579
H1_mix_00041945	chr18	-	2096	4	NNC	ENSG00000263146.3	novel	471	2	NA	NA	-241	57352	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	30.0111090542597	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGATAAGAAGAAATGCTG	719	False	NA	NA	False	NA	NA	NA	78979315	78919202	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_78919226_78976816_78977430_78977554_78978739_78979039
H1_mix_00041946	chr18	-	1266	2	FSM	ENSG00000263146.3	ENST00000575722.1	1256	2	0	-10	0	10	multi-exon	FALSE	canonical	3	15	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGTTGTTTTCATCTTGA	1191	False	NA	NA	False	ATTAAA	-29	NA	78978843	78976544	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_78977430_78978462
H1_mix_00041949	chr18	-	2074	1	FSM	ENSG00000274828.1	ENST00000616428.1	2072	1	0	-2	0	2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTAAAGTTTTCCTTT	-10	True	NA	-6	True	ATTAAA	-16	NA	79679358	79677284	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_79677300_79679400
H1_mix_00041951	chr18	-	2544	6	FSM	ENSG00000122490.19	ENST00000397778.7	2544	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	90.5008287254874	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGCCTTGGGCAGAGGGA	-3	True	NA	-1	True	AATAAA	-18	NA	79951653	79902419	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_79904184_79919183_79919401_79933968_79934023_79943328_79943463_79950723_79951026_79951580
H1_mix_00041953	chr18	-	3474	3	FSM	ENSG00000141759.15	ENST00000269601.10	3472	3	0	-2	0	2	multi-exon	FALSE	canonical	3	1382	junction_2	48	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTAAGTTTATTGTATAT	-1	True	NA	-16	True	GATAAA	-17	NA	79988563	79970810	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_79973857_79977597_79977702_79988239
H1_mix_00041955	chr18	-	752	2	FSM	ENSG00000141759.15	ENST00000588162.1	752	2	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGTGCGTTTTGCATAC	21	True	NA	-1	True	AGTAAA	-21	NA	79988541	79973406	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_79973857_79988239
H1_mix_00041956	chr18	-	3844	3	FSM	ENSG00000178184.16	ENST00000353265.8	3836	3	0	-8	0	8	multi-exon	FALSE	canonical	3	23	junction_1	25.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCACCTGTGTTCTAAG	1	True	NA	27	True	AATAAA	-37	NA	80247514	80157223	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_80160607_80202709_80202933_80247276
H1_mix_00041957	chr18	-	837	3	FSM	ENSG00000178184.16	ENST00000470488.2	596	3	-240	-1	-74	1	multi-exon	FALSE	canonical	2	3	junction_1	35.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCTGGGAACATTTGTC	NA	False	NA	NA	False	AATAAA	-22	NA	80247588	80182848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_80183151_80202709_80202933_80247276
H1_mix_00041958	chr18	-	683	2	ISM	ENSG00000178184.16	ENST00000470488.2	596	3	-229	19701	-63	-19695	5prime_fragment	FALSE	canonical	3	74	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACTAAACTGTGTTTTC	NA	False	NA	NA	False	ATTAAA	-36	NA	80247577	80202550	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr18_-_80202933_80247276
H1_mix_00041959	chr18	+	515	1	Intergenic	novelGene_592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTGTCATTAACCCCGCA	NA	False	NA	NA	False	NA	NA	NA	11622595	11623110	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr18_+_11622600_11623100
H1_mix_00041960	chr18	+	203	1	Intergenic	novelGene_594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	260	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCTGGATTACAGCTGCA	NA	False	NA	NA	False	ACTAAA	-19	NA	23286650	23286853	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr18_+_23286600_23286900
H1_mix_00041961	chr18	+	923	1	Intergenic	novelGene_596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATACATCGTTTATCCAA	NA	False	NA	NA	False	NA	NA	NA	24360485	24361408	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr18_+_24360500_24361400
H1_mix_00041962	chr18	+	312	1	Intergenic	novelGene_598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCATATTCTGGTAGAGA	NA	False	NA	NA	False	NA	NA	NA	31804120	31804432	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr18_+_31804100_31804400
H1_mix_00041963	chr18	+	4187	1	Intergenic	novelGene_600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTTCTTTTAAAAACGT	-2	True	NA	NA	False	AATAAA	-41	NA	35980162	35984349	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr18_+_35980200_35984300
H1_mix_00041965	chr18	+	3252	1	Intergenic	novelGene_601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATTCCAGTA	2487	False	NA	NA	False	NA	NA	NA	44703362	44706614	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr18_+_44703400_44706600
H1_mix_00041967	chr18	+	694	1	Intergenic	novelGene_602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCCATGGTGCCAAACCCA	NA	False	NA	NA	False	NA	NA	NA	56418072	56418766	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr18_+_56418100_56418800
H1_mix_00041968	chr18	+	402	1	Intergenic	novelGene_603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTACCGTTGTTCCTGGCCC	NA	False	NA	NA	False	NA	NA	NA	56419014	56419416	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr18_+_56419000_56419400
H1_mix_00041969	chr18	+	297	1	Intergenic	novelGene_604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACTATGTGTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	59399504	59399801	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr18_+_59399500_59399800
H1_mix_00041970	chr18	+	871	1	Intergenic	novelGene_605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACACAGATAAAAACCTTCA	NA	False	NA	NA	False	AATAAA	-36	NA	60014634	60015505	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr18_+_60014600_60015500
H1_mix_00041971	chr18	+	258	1	Intergenic	novelGene_606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCGCCCGGCCTAAACTGA	1843	False	NA	NA	False	NA	NA	NA	63754933	63755191	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr18_+_63754900_63755200
H1_mix_00041972	chr18	+	242	1	Intergenic	novelGene_607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATAAAGTGACAACTGAAT	8727	False	NA	NA	False	TTTAAA	-25	NA	68278364	68278606	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr18_+_68278400_68278600
H1_mix_00041974	chr18	+	2426	5	FSM	ENSG00000263006.7	ENST00000576266.6	2646	5	99	121	99	0	multi-exon	FALSE	canonical	3	9	junction_4	13.4420050587701	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGACTGCAATGTGTTTT	2892	False	NA	11	True	AATAAA	-27	NA	112196	122219	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_112555_116841_116921_117042_117305_118296_118505_120700
H1_mix_00041976	chr18	+	1104	10	FSM	ENSG00000101557.15	ENST00000578786.1	1104	10	0	0	0	0	multi-exon	FALSE	canonical	3	538	junction_5	16.8918126124266	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGTGAACAGTAATCTT	NA	False	NA	NA	False	NA	NA	NA	196538	211268	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_196768_197615_197697_198046_198133_199201_199317_202879_202946_203097_203191_204563_204693_209970_210032_210385_210494_211132
H1_mix_00041977	chr18	+	1885	5	FSM	ENSG00000176890.16	ENST00000581920.1	886	5	-784	-215	-784	0	multi-exon	FALSE	canonical	3	63	junction_1	269.503594595694	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGCTGTATTCTGGTTT	99	False	NA	104	True	ATTAAA	-19	NA	666936	673578	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_667753_669071_669174_670691_670868_671379_671452_672859
H1_mix_00041978	chr18	+	483	1	FSM	ENSG00000273355.1	ENST00000610185.1	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGCCTTTCTTCACTA	818	False	NA	6	True	ATTAAA	-17	NA	813273	813756	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_813300_813800
H1_mix_00041979	chr18	+	232	1	FSM	ENSG00000266575.1	ENST00000584794.1	232	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGGACTGGAAGCTGCAC	NA	False	NA	NA	False	NA	NA	NA	832237	832469	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_832200_832500
H1_mix_00041982	chr18	+	781	1	FSM	ENSG00000272625.1	ENST00000608032.1	720	1	40	-101	40	101	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTCTGATAACTAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	2921005	2921786	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_2921000_2921800
H1_mix_00041983	chr18	+	1016	5	FSM	ENSG00000101608.13	ENST00000578611.5	1004	5	-12	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	1842.94804593076	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAATTAAACTTTATGATA	-21	True	NA	-11	True	AATATA	-40	NA	3247800	3256211	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_3247910_3249360_3249444_3253232_3253429_3253888_3254051_3255745
H1_mix_00041984	chr18	+	1689	3	FSM	ENSG00000177426.22	ENST00000405385.7	1689	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	852	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTGTTGTAATTCAGA	22	False	NA	68	True	AATAAA	-12	NA	3449650	3458406	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_3450071_3456353_3456581_3457364
H1_mix_00041985	chr18	+	442	3	FSM	ENSG00000266835.6	ENST00000581442.5	450	3	8	0	8	0	multi-exon	FALSE	canonical	1	1	junction_2	1.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTAAACTTGGCACTTAG	4401	False	NA	-48	True	CATAAA	-35	NA	3466257	3478927	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_3466358_3467126_3467297_3478755
H1_mix_00041986	chr18	+	967	1	FSM	ENSG00000266373.1	ENST00000577490.1	586	1	-288	-93	-288	93	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGGTGAGTGTGGCCGG	NA	False	NA	NA	False	AATAAA	-11	NA	3579880	3580847	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_3579900_3580800
H1_mix_00041987	chr18	+	646	4	FSM	ENSG00000177337.9	ENST00000573355.3	543	4	-116	13	-116	0	multi-exon	FALSE	canonical	1	3	junction_3	13.8884444373331	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGACTCTGAGACTGTG	NA	False	NA	8	True	AATAAA	-14	NA	3593953	3597372	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_3594241_3594419_3594485_3596578_3596676_3597175
H1_mix_00041988	chr18	+	432	3	FSM	ENSG00000177337.9	ENST00000574411.5	408	3	-24	0	2	0	multi-exon	FALSE	canonical	1	1	junction_1	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGACTCTGAGACTGTG	11	True	NA	8	True	AATAAA	-14	NA	3594102	3597372	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_3594241_3596578_3596676_3597175
H1_mix_00041989	chr18	+	1548	1	FSM	ENSG00000262001.2	ENST00000573177.1	1388	1	106	-266	106	262	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCCACATCCTTCTGTG	413	False	NA	NA	False	NA	NA	NA	3603105	3604653	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_3603100_3604700
H1_mix_00041990	chr18	+	6729	2	FSM	ENSG00000263753.9	ENST00000658607.1	6710	2	-19	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGGTACTCAAAACTCATG	-39	True	NA	5	True	ATTAAA	-24	NA	5238061	5246494	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_5241890_5243593
H1_mix_00041991	chr18	+	4017	3	FSM	ENSG00000263753.9	ENST00000582008.6	4017	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	19	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGACTTTCTAGTTATT	-39	True	NA	19	True	ATTAAA	-38	NA	5238061	5246508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_5239050_5241698_5241813_5243593
H1_mix_00041996	chr18	+	283	1	FSM	ENSG00000088756.13	ENST00000579796.1	1960	1	1676	1	1676	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGACTGCAGAGAGACTC	NA	False	NA	12	True	AATAAA	-14	NA	6898435	6898718	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_6898400_6898700
H1_mix_00041997	chr18	+	595	4	FSM	ENSG00000173482.17	ENST00000578916.2	604	4	9	0	9	0	multi-exon	FALSE	canonical	2	3	junction_1	24.9131825880731	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAGTGGAGGTCAAATCT	5	True	NA	NA	False	AATAGA	-27	NA	7946878	8069712	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_7946978_7949180_7949356_7955120_7955415_8069685
H1_mix_00042000	chr18	+	6432	15	NNC	ENSG00000168502.17	novel	5718	14	NA	NA	497	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	24.5287211909897	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGTCTCGGTCTCTCATT	539	False	NA	9	True	AATAAA	-18	NA	8706157	8832778	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_+_8706714_8718423_8718649_8720337_8720497_8777832_8777893_8779032_8779111_8783529_8784844_8785935_8786092_8796231_8796463_8798096_8798292_8806892_8807061_8812978_8813234_8818962_8819260_8821466_8821499_8824698_8826233_8831606
H1_mix_00042001	chr18	+	701	1	FSM	ENSG00000272788.1	ENST00000609424.1	650	1	-87	36	-87	-36	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAGCCTGAATAAACGTG	NA	False	NA	-28	True	NA	NA	NA	8801568	8802269	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_8801600_8802300
H1_mix_00042002	chr18	+	560	2	FSM	ENSG00000168502.17	ENST00000518226.1	560	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTCGACCGCCTGGACA	NA	False	NA	NA	False	NA	NA	NA	8809817	8813157	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_8810199_8812978
H1_mix_00042003	chr18	+	883	9	NNC	ENSG00000265257.5	novel	914	9	NA	NA	-41	-26360	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1271.02467890085	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGACTTTTATGTCACAT	-18	True	NA	NA	False	AAAAAG	-9	NA	9102694	9156164	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_+_9102798_9117837_9117904_9119325_9119389_9119473_9119591_9122512_9122682_9124873_9124984_9126830_9126908_9134185_9134336_9156136
H1_mix_00042008	chr18	+	1093	4	FSM	ENSG00000128791.12	ENST00000581641.1	1119	4	0	26	0	-26	multi-exon	FALSE	canonical	3	359	junction_2	13.6381816969859	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAGACTCCGTCTCACCA	32	False	NA	NA	False	NA	NA	NA	9334849	9397041	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_9334921_9337192_9337353_9359971_9360072_9396279
H1_mix_00042009	chr18	+	789	1	FSM	ENSG00000287509.1	ENST00000668094.1	974	1	30	155	30	-155	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATAGAATTAAAAGAATAT	432	False	NA	NA	False	NA	NA	NA	9335298	9336087	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_9335300_9336100
H1_mix_00042010	chr18	+	4368	10	FSM	ENSG00000017797.13	ENST00000019317.8	4368	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	143.31894845991	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGACTTCTCTGTTTTG	-13	True	NA	40	True	ATTAAA	-28	NA	9475008	9538114	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_9475177_9512990_9513290_9516844_9517304_9522159_9522510_9524593_9524756_9525719_9525852_9530833_9530942_9533334_9533457_9533702_9533827_9535670
H1_mix_00042011	chr18	+	3676	3	FSM	ENSG00000017797.13	ENST00000609094.2	3676	3	0	0	0	0	multi-exon	FALSE	canonical	3	480	junction_1	21	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTTATTTTTGTGTTTT	65	False	NA	NA	False	AATAAA	-17	NA	9475669	9520199	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_9475692_9512990_9513290_9516844
H1_mix_00042012	chr18	+	757	5	FSM	ENSG00000168461.13	ENST00000581109.1	469	5	-105	-183	-73	0	multi-exon	FALSE	canonical	1	3	junction_3	140.036379201977	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGGCAGGAAATGTACCTG	NA	False	NA	NA	False	NA	NA	NA	9708201	9859469	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_9708445_9775277_9775358_9792153_9792236_9845581_9845692_9859227
H1_mix_00042016	chr18	+	705	1	FSM	ENSG00000273141.1	ENST00000609611.1	512	1	-277	84	-277	-84	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCTCCAGAGATGTGCTT	7	True	NA	NA	False	NA	NA	NA	11908434	11909139	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_11908400_11909100
H1_mix_00042018	chr18	+	374	1	FSM	ENSG00000267076.1	ENST00000590792.1	430	1	88	-32	88	32	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTAGGACTGGCG	83	False	NA	NA	False	AATAAA	-29	NA	12211465	12211839	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_12211500_12211800
H1_mix_00042021	chr18	+	1701	7	FSM	ENSG00000141391.14	ENST00000336990.8	1715	7	14	0	14	0	multi-exon	FALSE	canonical	2	5	junction_6	11.5385826204473	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCGTTTCGTGTCTGTCT	-30	True	NA	NA	False	ATTAAA	-23	NA	12407909	12432235	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_12408008_12420324_12420494_12421539_12421630_12427040_12427112_12427220_12427324_12429349_12429434_12431149
H1_mix_00042026	chr18	+	871	5	FSM	ENSG00000168675.19	ENST00000587905.6	871	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4.32290411644765	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTACCCTGGCCGCCCC	54	False	NA	NA	False	NA	NA	NA	13218025	13621271	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_13218095_13278104_13278189_13387340_13387763_13438243_13438385_13621116
H1_mix_00042027	chr18	+	426	1	FSM	ENSG00000279352.1	ENST00000624346.1	375	1	-149	98	-50	-98	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGCCATTGTCATCCTGG	NA	False	NA	NA	False	NA	NA	NA	14010003	14010429	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_14010000_14010400
H1_mix_00042028	chr18	+	317	1	FSM	ENSG00000270469.1	ENST00000603126.1	811	1	3	491	3	-491	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTCAACACAAGGAGAGTT	NA	False	NA	NA	False	AAAACA	-36	NA	14053953	14054270	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_14054000_14054300
H1_mix_00042029	chr18	+	1107	1	FSM	ENSG00000199977.1	ENST00000363107.1	205	1	-756	-146	-756	146	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTACATGACTGCTAATG	NA	False	NA	NA	False	AATGAA	-21	NA	21816867	21817974	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_21816900_21818000
H1_mix_00042031	chr18	+	3122	18	NIC	ENSG00000101773.19	novel	3275	19	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_17	66.8411327269478	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGTAGTCTGTGATTTG	8	True	NA	15	True	AATACA	-16	NA	22933338	23026486	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_+_22933565_22936753_22936961_22946443_22946487_22949617_22949714_22968805_22968919_22975152_22975220_22982217_22982394_22984885_22984991_22989220_22989319_22990936_22991050_22992747_22993640_22993720_22993848_22996373_22996463_22997619_22997735_23001585_23001730_23006362_23006433_23016827_23016925_23026142
H1_mix_00042032	chr18	+	3330	20	NNC	ENSG00000101773.19	novel	3275	19	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	85.972681353196	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGTAGTCTGTGATTTG	8	True	NA	15	True	AATACA	-16	NA	22933338	23026486	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_+_22933565_22936753_22936961_22946443_22946487_22949617_22949714_22957330_22957397_22968805_22968919_22975152_22975220_22982217_22982394_22984885_22984991_22989220_22989319_22990936_22991050_22992747_22993640_22993720_22993848_22996373_22996463_22997619_22997735_23001585_23001730_23006362_23006433_23016827_23016925_23022128_23022271_23026142
H1_mix_00042036	chr18	+	1655	4	FSM	ENSG00000134508.13	ENST00000582882.5	604	4	-1073	22	-101	-22	multi-exon	FALSE	canonical	3	110	junction_2	9.0921211313239	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTTCAGCCAGAAAGC	785	False	NA	NA	False	GATAAA	-13	NA	23135350	23214209	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_23136608_23188837_23188910_23194447_23194541_23213976
H1_mix_00042040	chr18	+	2010	18	FSM	ENSG00000141452.10	ENST00000590868.5	2002	18	-8	0	0	0	multi-exon	FALSE	non_canonical	1	6	junction_3	26.4644437312958	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAATGTTATAAAGTGTA	1	True	NA	NA	False	AATAAA	-13	NA	23503510	23531776	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_23503721_23504370_23504448_23506969_23507055_23515855_23515997_23516319_23516424_23518889_23518980_23519068_23519175_23520201_23520314_23524129_23524175_23524428_23524483_23526636_23526766_23527794_23527902_23529178_23529299_23529634_23529713_23530027_23530133_23530228_23530298_23530386_23530613_23531624
H1_mix_00042041	chr18	+	1947	19	FSM	ENSG00000141452.10	ENST00000589215.5	1945	19	-2	0	0	0	multi-exon	FALSE	non_canonical	3	7	junction_2	33.432445245027	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGTTATAAAGTGTATC	1	True	NA	NA	False	AATAAA	-15	NA	23503510	23531778	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_23503721_23504370_23504448_23507984_23508042_23509192_23509280_23515855_23515997_23516319_23516424_23518889_23518980_23519068_23519175_23520201_23520314_23524129_23524175_23524428_23524483_23526636_23526766_23527794_23527902_23529178_23529299_23529634_23529713_23530027_23530133_23530228_23530298_23530510_23530613_23531624
H1_mix_00042057	chr18	+	2180	5	FSM	ENSG00000186812.13	ENST00000355632.8	2162	5	-18	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	12.9711217710728	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATCCAGGCTGGAGTGCA	-10	True	NA	NA	False	NA	NA	NA	35241036	35259227	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_35241110_35242390_35242885_35243151_35243294_35254231_35254403_35257927
H1_mix_00042058	chr18	+	1103	3	FSM	ENSG00000186812.13	ENST00000592264.1	1104	3	1	0	1	0	multi-exon	FALSE	canonical	0	0	junction_2	18.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACAGTTGGAGGGTGAAT	1307	False	NA	9	True	AATAAA	-20	NA	35242390	35258394	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_35242885_35243151_35243294_35257927
H1_mix_00042069	chr18	+	1095	10	FSM	ENSG00000152240.13	ENST00000593165.5	1079	10	-16	0	0	0	multi-exon	TRUE	canonical	2	2	junction_2	626.744321429755	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATATCATAATTGATAGA	30	True	NA	-64	True	NA	NA	NA	46104405	46128239	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_46104442_46105193_46105369_46109646_46109785_46118180_46118317_46119925_46120061_46122466_46122591_46123298_46123365_46124821_46124894_46125743_46125792_46128074
H1_mix_00042071	chr18	+	464	4	FSM	ENSG00000167216.19	ENST00000586198.5	464	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	3.2659863237109	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAAAGCTGTGTTGTTTGG	NA	False	NA	11	True	AATAAA	-22	NA	47069222	47077542	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_47069284_47069481_47069601_47075276_47075369_47077350
H1_mix_00042072	chr18	+	987	4	ISM	ENSG00000167216.19	ENST00000687617.1	3549	9	13360	-9	363	9	3prime_fragment	FALSE	canonical	3	4	junction_3	17.0489491367259	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTCATTAGTTCTGAGA	NA	False	NA	NA	False	CATAAA	-8	NA	47069585	47098941	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr18_+_47069601_47075276_47075369_47077350_47077462_47098172
H1_mix_00042075	chr18	+	4407	13	FSM	ENSG00000134030.14	ENST00000382998.8	4407	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	14.1566140804298	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGGCTCCAGACATACTG	17	True	NA	15	True	TATAAA	-45	NA	48539157	48861906	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_48539313_48539757_48539832_48619537_48619746_48636613_48636686_48663751_48663826_48664446_48664552_48670668_48670745_48711618_48711696_48757918_48758412_48761389_48761690_48817220_48817377_48857587_48857642_48859343
H1_mix_00042076	chr18	+	557	5	FSM	ENSG00000134030.14	ENST00000591387.5	859	5	302	0	-271	0	multi-exon	FALSE	canonical	1	3	junction_1	8.25757228245687	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATCGACCGCGAAGGGTA	29	False	NA	NA	False	NA	NA	NA	48539716	48664534	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_48539832_48619537_48619746_48636613_48636686_48663751_48663826_48664446
H1_mix_00042078	chr18	+	1404	6	FSM	ENSG00000101670.12	ENST00000580036.5	1453	6	0	49	0	-46	multi-exon	FALSE	canonical	3	11	junction_1	2.72763633939717	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCCTAGGAAAGGGAATCT	28	False	NA	NA	False	NA	NA	NA	49562086	49581803	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_49562406_49565316_49565499_49567441_49567622_49569436_49569549_49575368_49575591_49581414
H1_mix_00042080	chr18	+	2569	15	FSM	ENSG00000082212.13	ENST00000640967.1	2569	15	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_13	108.490195174401	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTAATAAATATCTTACA	-21	True	NA	-15	True	TATAAA	-20	NA	50879116	50947865	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_50879309_50895808_50895929_50908062_50908197_50912800_50912951_50916167_50916244_50917346_50917509_50918109_50918214_50920455_50920566_50920660_50920759_50921073_50921188_50924097_50924213_50925755_50925899_50932257_50932361_50940287_50940387_50947016
H1_mix_00042081	chr18	+	2529	15	FSM	ENSG00000082212.13	ENST00000639115.1	2524	15	-5	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	115.987068244697	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATCTTACATTTAATTGC	23	True	NA	-6	True	TATAAA	-29	NA	50879160	50947874	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_50879309_50895808_50895929_50908062_50908197_50912800_50912951_50917346_50917509_50918109_50918214_50920455_50920566_50920660_50920759_50921073_50921188_50924097_50924213_50925755_50925899_50932257_50932361_50939569_50939641_50940287_50940387_50947016
H1_mix_00042091	chr18	+	2017	9	FSM	ENSG00000101751.11	ENST00000406285.7	2030	9	13	0	13	0	multi-exon	FALSE	canonical	3	16	junction_4	127.507597812836	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTCTGAAAAGCAAGGGAAT	-23	True	NA	NA	False	CATAAA	-20	NA	54269531	54294483	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_54269662_54271359_54271486_54273925_54274091_54277702_54277856_54282836_54283016_54283921_54284014_54287280_54287412_54291832_54292039_54293648
H1_mix_00042092	chr18	+	1204	6	FSM	ENSG00000101751.11	ENST00000583136.5	1204	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	146.189466104778	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAAATTTTAGAAAAAGAA	30	True	NA	NA	False	NA	NA	NA	54269584	54282911	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_54270033_54271359_54271486_54273925_54274091_54277702_54277856_54280666_54280904_54282836
H1_mix_00042093	chr18	+	6025	11	NNC	ENSG00000101751.11	novel	6020	10	NA	NA	0	17804	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	150.628151419315	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACTCAAAGCAA	30	True	NA	NA	False	NA	NA	NA	54269584	54339070	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_+_54269700_54271359_54271486_54273925_54274091_54277702_54277856_54280666_54280904_54282836_54283016_54283921_54284014_54287280_54287412_54291832_54292039_54293648_54298241_54339041
H1_mix_00042102	chr18	+	2892	11	FSM	ENSG00000049759.20	ENST00000676251.1	3849	11	0	957	0	-555	multi-exon	FALSE	canonical	3	74	junction_1	56.8866416656846	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGATCCACTTTATCAG	-9	True	NA	NA	False	NA	NA	NA	58195429	58335537	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_58195734_58245426_58245509_58248898_58248938_58252000_58252055_58315981_58316033_58322424_58322487_58323231_58323335_58324995_58325163_58328994_58329128_58330737_58330915_58333817
H1_mix_00042108	chr18	+	6349	11	NIC	ENSG00000074657.14	novel	6556	10	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	101.271121253791	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGAATTTTTGTTTTTGG	-3	True	NA	5	True	AATAAA	-20	NA	58863530	58986480	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_+_58863751_58865303_58865386_58865469_58865580_58918270_58920634_58934432_58934615_58939444_58939622_58948066_58948230_58953517_58953800_58979054_58979168_58981469_58981618_58983971
H1_mix_00042109	chr18	+	5920	12	NIC	ENSG00000074657.14	novel	6556	10	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_5	143.240305514778	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTGTGCTTCTGTGAGA	0	True	NA	24	True	AATAAA	-14	NA	58863533	58985944	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_+_58863751_58865303_58865386_58865469_58865580_58918270_58920634_58931645_58931756_58934432_58934615_58939444_58939622_58948066_58948230_58953517_58953800_58979054_58979168_58981469_58981618_58983971
H1_mix_00042112	chr18	+	736	6	FSM	ENSG00000166562.9	ENST00000299714.7	727	6	-9	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	347.506201383515	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTTTTCTTTTGTGGAC	-38	True	NA	15	True	AATAAA	-16	NA	59139865	59158832	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_59140036_59149512_59149623_59152535_59152613_59155687_59155808_59157607_59157666_59158631
H1_mix_00042114	chr18	+	858	3	FSM	ENSG00000134443.10	ENST00000256857.7	858	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	6	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCAGGCTGTTCTCTTATT	-1	True	NA	21	True	AATAAA	-22	NA	59220157	59230771	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_59220405_59225491_59225735_59230403
H1_mix_00042118	chr18	+	591	6	FSM	ENSG00000081913.14	ENST00000591386.1	591	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	70.3391782721408	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCCTTGATCACAAAACCC	2687	False	NA	NA	False	NA	NA	NA	62903149	62958726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_62903167_62905223_62905285_62914912_62915009_62919958_62920115_62945108_62945272_62958628
H1_mix_00042124	chr18	+	858	3	FSM	ENSG00000075336.12	ENST00000577952.1	858	3	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_2	16.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCTATGGGGAGGTGAC	13	True	NA	NA	False	NA	NA	NA	74148537	74158040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_74149110_74155144_74155404_74158013
H1_mix_00042125	chr18	+	590	4	FSM	ENSG00000075336.12	ENST00000584925.1	590	4	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_3	13.735598518691	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATAGGGTTTCTGATG	6332	False	NA	NA	False	NA	NA	NA	74155094	74158476	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_74155404_74158013_74158088_74158170_74158277_74158375
H1_mix_00042130	chr18	+	2158	1	FSM	ENSG00000133313.15	ENST00000585263.1	2566	1	112	296	112	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTGGCTGGGTGCAGTG	5964	False	NA	19	True	AATAAA	-20	NA	74507178	74509336	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_74507200_74509300
H1_mix_00042136	chr18	+	2844	10	FSM	ENSG00000166377.21	ENST00000586366.5	2845	10	1	0	1	0	multi-exon	FALSE	canonical	2	12	junction_7	31.0904693427201	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACCTGCCTTTTTTATCT	-19	True	NA	NA	False	AATAAA	-18	NA	79069392	79255271	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_79069530_79096475_79096650_79110354_79110506_79113240_79113355_79126266_79126376_79143801_79143861_79154503_79154556_79193182_79193264_79206936_79207013_79253380
H1_mix_00042139	chr18	+	3228	12	FSM	ENSG00000060069.18	ENST00000591598.5	3228	12	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_11	86.9172685388119	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTCTTCTCGTGGGTGTG	278	False	NA	18	True	AATAAA	-15	NA	79680151	79754503	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_79680262_79695224_79695309_79695976_79696071_79697859_79697989_79704766_79704918_79710345_79710437_79712971_79713139_79714490_79715529_79717534_79717677_79717809_79718017_79728906_79729070_79753651
H1_mix_00042142	chr18	+	351	3	FSM	ENSG00000267127.7	ENST00000591514.1	852	3	0	501	0	-501	multi-exon	FALSE	canonical	2	2	junction_2	4	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCCTCATTTTATTTTA	2911	False	NA	NA	False	NA	NA	NA	80037386	80079808	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_80037507_80069797_80069907_80079686
H1_mix_00042143	chr18	+	2613	3	FSM	ENSG00000101546.13	ENST00000593019.1	1551	3	-1062	0	-1062	0	multi-exon	FALSE	canonical	3	140	junction_1	1	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGCACTGTGTGTAATTT	5764	False	NA	19	True	NA	NA	NA	80040239	80046332	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_80042220_80044211_80044286_80045773
H1_mix_00042146	chr18	-	2682	17	FSM	ENSG00000079134.13	ENST00000578529.5	2681	17	0	-1	0	0	multi-exon	FALSE	canonical	0	0	junction_4	106.545104885208	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGTACAGTCGGCTGGT	7658	False	NA	-15	True	AATAAA	-15	NA	261162	214519	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_214922_215428_215505_216485_216634_218885_218970_223439_223506_224083_224180_224923_224995_225088_225140_225336_225404_226800_226902_246323_246456_247848_247958_252538_252613_254272_254356_259179_259276_259681_259731_260185
H1_mix_00042147	chr18	-	2277	20	FSM	ENSG00000079134.13	ENST00000579232.5	2277	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	98.6538198818744	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGTACAGTCGGCTGGT	22	True	NA	-15	True	AATAAA	-15	NA	268019	214519	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_214922_215428_215505_216485_216634_218885_218970_223439_223506_224083_224180_224923_224995_225088_225404_226800_226902_246323_246456_247848_247958_252538_252613_254272_254356_259179_259276_259681_259731_260185_260305_264025_264093_265302_265364_265456_265531_267965
H1_mix_00042157	chr18	-	752	4	FSM	ENSG00000132199.20	ENST00000584646.5	752	4	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_3	16.3367343397905	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACATGTTGCATAACTTG	5546	False	NA	-17	True	ATTAAA	-18	NA	677906	674000	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_674407_675320_675403_677344_677445_677742
H1_mix_00042162	chr18	-	319	1	FSM	ENSG00000277447.1	ENST00000618479.1	319	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGCTTCCACTGTGCTG	NA	False	NA	NA	False	NA	NA	NA	3025387	3025068	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_3025100_3025400
H1_mix_00042163	chr18	-	1734	1	FSM	ENSG00000250933.1	ENST00000509132.1	967	1	-585	-182	-585	182	mono-exon	FALSE	NA	NA	NA	NA	NA	218	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTGTACTCAGCAAAAAAAA	NA	False	NA	NA	False	AATAAA	-5	NA	3979200	3977466	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_3977500_3979200
H1_mix_00042164	chr18	-	3151	4	NNC	ENSG00000198081.11	novel	3528	4	NA	NA	0	9608	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	58.5168541723	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGTGTAGCACCATCT	-16	True	NA	NA	False	NA	NA	NA	5296040	5279410	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_5279425_5289379_5292205_5293243_5293328_5295812
H1_mix_00042166	chr18	-	4304	20	FSM	ENSG00000082397.18	ENST00000540638.6	3370	20	-222	-712	-193	0	multi-exon	FALSE	canonical	3	24	junction_2	28.6372865828012	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGTATGTTTAATAAT	NA	False	NA	-2	True	AATAAA	-25	NA	5544503	5392380	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_5393479_5394676_5394794_5395066_5395148_5395608_5395708_5396200_5396333_5397057_5397427_5406776_5406969_5410565_5410620_5419710_5419932_5423377_5423554_5424261_5424360_5428312_5428466_5433468_5433557_5433902_5434122_5438034_5438111_5443837_5443881_5445139_5445245_5478240_5478439_5489000_5489195_5543912
H1_mix_00042167	chr18	-	3758	19	NIC	ENSG00000082397.18	novel	4459	23	NA	NA	-132	-1	combination_of_known_junctions	FALSE	canonical	2	2	junction_8	28.7900552960674	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTTGTATGTTTAATAA	125	False	NA	-3	True	AATAAA	-24	NA	5544129	5392381	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_5393479_5395066_5395148_5395608_5395708_5396200_5396333_5397057_5397427_5406776_5406969_5410565_5410620_5419710_5419878_5423377_5423554_5424261_5424360_5428312_5428466_5433468_5433557_5433902_5434122_5438034_5438111_5443837_5443881_5445139_5445245_5478240_5478439_5489000_5489195_5543912
H1_mix_00042173	chr18	-	10659	3	FSM	ENSG00000206432.4	ENST00000581347.2	10638	3	-58	37	-58	-37	multi-exon	FALSE	canonical	3	4	junction_2	19.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTGAAAAATGTTAATTAAA	NA	False	NA	NA	False	TATAAA	-10	NA	5896013	5882108	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_5892158_5895029_5895481_5895854
H1_mix_00042174	chr18	-	2681	10	NIC	ENSG00000154655.16	novel	3549	19	NA	NA	86853	-40	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	6	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAATATATTTTAAATGAT	NA	False	NA	NA	False	AGTAAA	-26	NA	6239868	5954756	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_5956388_5960093_5960157_5969392_5969563_6093354_6093529_6138193_6138297_6171827_6171943_6213148_6213260_6215749_6215836_6237963_6238041_6239717
H1_mix_00042175	chr18	-	722	8	ISM	ENSG00000154655.16	ENST00000400104.7	4534	17	30	211972	30	-1560	5prime_fragment	FALSE	canonical	3	8	junction_4	3.14934395500694	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGTATTTTCTTTCCCA	33	False	NA	NA	False	AAGAAA	-21	NA	6414881	6241358	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr18_-_6241450_6243293_6243430_6244483_6244589_6263946_6264039_6301902_6301958_6311553_6311657_6311997_6312057_6414800
H1_mix_00042176	chr18	-	9662	63	NNC	ENSG00000101680.16	novel	9642	63	NA	NA	0	-10	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_7	69.5471976078782	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGATCAGAGTATGAAGCC	2	True	NA	-12	True	AATACA	-8	NA	7117797	6941751	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_6942240_6943179_6943403_6947162_6947297_6948402_6948557_6949100_6949260_6950781_6950972_6955352_6955466_6956605_6956766_6958476_6958663_6959340_6959493_6961585_6961760_6961944_6962060_6964661_6964804_6965287_6965433_6966146_6966298_6971856_6971982_6973056_6973208_6974902_6975037_6975936_6976081_6977726_6977882_6978195_6978379_6980520_6980638_6982496_6982591_6983098_6983235_6985236_6985401_6985526_6985644_6986136_6986348_6992560_6992721_6993640_6993753_6995356_6995447_6997741_6997885_6999444_6999639_6999910_6999998_7002263_7002386_7007138_7007277_7008487_7008609_7009238_7009367_7010199_7010386_7011299_7011480_7011994_7012139_7013814_7014052_7015721_7015859_7016490_7016672_7017277_7017385_7023163_7023376_7024379_7024467_7025978_7026107_7032065_7032177_7032983_7033096_7034478_7034691_7035986_7036089_7037577_7037752_7038809_7038951_7040075_7040237_7042144_7042251_7043226_7043406_7044721_7044840_7046277_7046368_7049077_7049258_7050693_7050937_7079974_7080088_7080286_7080458_7117659
H1_mix_00042178	chr18	-	728	1	Intergenic	novelGene_590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGCAGGCATTGTTCTA	NA	False	NA	NA	False	AATAAA	-17	NA	9319173	9318445	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr18_-_9318400_9319200
H1_mix_00042179	chr18	-	402	2	ISM	ENSG00000264964.2	ENST00000584509.2	5142	3	-1	11539	-1	-11539	5prime_fragment	FALSE	canonical	3	14	junction_1	0	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGCACACATGTCATGT	376	False	NA	NA	False	NA	NA	NA	9334446	9322060	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr18_-_9322153_9334136
H1_mix_00042180	chr18	-	1797	1	FSM	ENSG00000273335.1	ENST00000608162.1	586	1	-1215	4	-1215	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATTCAGTTGAATTTCTT	591	False	NA	NA	False	ATTAAA	-17	NA	9475221	9473424	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_9473400_9475200
H1_mix_00042181	chr18	-	3711	19	NIC	ENSG00000154845.16	novel	2917	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_16	49.4663185073103	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATTAGTTTCTCTGGAA	2693	False	NA	-4	True	ATTAAA	-19	NA	9614505	9546793	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_9547953_9549196_9549339_9550051_9550187_9550277_9550399_9553321_9553423_9557220_9557383_9559418_9559605_9561979_9562076_9563377_9563551_9570156_9570684_9577063_9577192_9583116_9583276_9584514_9584581_9584720_9584829_9588088_9588236_9588710_9588854_9595017_9595103_9614225_9614271_9614477
H1_mix_00042182	chr18	-	3982	21	NNC	ENSG00000154845.16	novel	3885	20	NA	NA	-93	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	57.5446565720919	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAGATATATACACTTTT	2536	False	NA	-22	True	AATAAA	-22	NA	9614662	9546909	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_9547953_9549196_9549339_9550051_9550187_9550277_9550399_9553321_9553423_9557220_9557383_9559418_9559605_9561979_9562076_9562921_9563045_9563377_9563551_9570156_9570684_9577063_9577192_9583116_9583276_9584514_9584581_9584720_9584829_9588088_9588236_9588710_9588854_9593767_9593875_9595017_9595103_9614225_9614271_9614477
H1_mix_00042183	chr18	-	4725	19	NIC	ENSG00000154845.16	novel	3923	20	NA	NA	-15	0	intron_retention	FALSE	canonical	3	10	junction_17	51.1263564219831	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAGATATATACACTTTT	2288	False	NA	-22	True	AATAAA	-22	NA	9614910	9546909	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_9547953_9549196_9549339_9550051_9550187_9550277_9550399_9553321_9553423_9557220_9557383_9559418_9559605_9561979_9562076_9563377_9563551_9570156_9570684_9577063_9577192_9583116_9583276_9584514_9584581_9584720_9584829_9588088_9588236_9588710_9588854_9593767_9594235_9595017_9595154_9614225
H1_mix_00042186	chr18	-	481	3	FSM	ENSG00000154845.16	ENST00000577779.1	481	3	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	14	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATACCTGCTGTATGACGG	2685	False	NA	NA	False	TATAAA	-43	NA	9614513	9594702	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_9595103_9614225_9614271_9614477
H1_mix_00042189	chr18	-	1099	7	FSM	ENSG00000154889.17	ENST00000588186.5	1099	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	30.9731066141796	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCTGAAAGACTGTTTTC	-5	True	NA	NA	False	AATATA	-42	NA	11908350	11888703	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_11888744_11889386_11889491_11893467_11893577_11896983_11897357_11905737_11905954_11906202_11906310_11908200
H1_mix_00042191	chr18	-	2969	18	NNC	ENSG00000141385.12	novel	3157	18	NA	NA	0	58060	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	179.075750919755	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGAAAAGAAAACAAA	287	False	NA	NA	False	AAAAAG	-11	NA	12377002	12270883	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_12270919_12328944_12329784_12337340_12337536_12340200_12340402_12344131_12344248_12348272_12348384_12351084_12351211_12351305_12351414_12353004_12353159_12356693_12356832_12358669_12358944_12359926_12360052_12363781_12363857_12366964_12367118_12367275_12367383_12370848_12370927_12371591_12371692_12376968
H1_mix_00042192	chr18	-	3306	18	NNC	ENSG00000141385.12	novel	3160	17	NA	NA	-120	33573	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	179.075750919755	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCAGATGTGATGGTGG	NA	False	NA	NA	False	ACTAAA	-24	NA	12377347	12295370	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_12295397_12328943_12329784_12337340_12337536_12340200_12340402_12344131_12344248_12348272_12348384_12351084_12351211_12351305_12351414_12353004_12353159_12356693_12356832_12358669_12358944_12359926_12360052_12363781_12363857_12366964_12367118_12367275_12367383_12370848_12370927_12371591_12371692_12376968
H1_mix_00042195	chr18	-	5775	17	NIC	ENSG00000134278.16	novel	5638	17	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_5	27.0693553672783	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTGTTGAGTTGCTA	-53	True	NA	-5	True	AATAAA	-17	NA	12658112	12446511	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_12449897_12452254_12452392_12452484_12452513_12453067_12453139_12454345_12454484_12459754_12459929_12463350_12463494_12464867_12464959_12479698_12479872_12493071_12493202_12496015_12496103_12506476_12506642_12512453_12512532_12535475_12535602_12546673_12546905_12635061_12635097_12657529
H1_mix_00042196	chr18	-	5643	17	FSM	ENSG00000134278.16	ENST00000409402.9	5638	17	-5	0	-5	0	multi-exon	FALSE	canonical	1	5	junction_8	34.7252047330178	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTGTTGAGTTGCTA	-53	True	NA	-5	True	AATAAA	-17	NA	12658112	12446511	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_12449897_12452254_12452392_12452484_12452513_12453067_12453139_12454345_12454484_12463350_12463494_12464867_12464959_12479698_12479872_12485958_12486001_12493071_12493202_12496015_12496103_12506476_12506642_12512453_12512532_12535475_12535602_12546673_12546905_12635061_12635097_12657529
H1_mix_00042197	chr18	-	510	3	FSM	ENSG00000134278.16	ENST00000498803.5	587	3	77	0	77	0	multi-exon	FALSE	canonical	3	105	junction_2	6	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCTCTCCTTTCTGTGG	NA	False	NA	NA	False	NA	NA	NA	12452533	12449572	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_12449897_12452254_12452392_12452484
H1_mix_00042198	chr18	-	1264	10	FSM	ENSG00000134278.16	ENST00000464481.5	1264	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	32.6216621205323	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGAGAGGACGATCAGTG	NA	False	NA	NA	False	NA	NA	NA	12493149	12449665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_12449897_12452254_12452392_12452484_12452513_12453067_12453139_12454345_12454484_12459754_12459929_12463350_12463494_12464867_12464959_12479698_12479872_12493071
H1_mix_00042200	chr18	-	1031	1	FSM	ENSG00000260302.3	ENST00000563722.1	1273	1	-460	702	-243	-702	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAATAAAAAATACATCA	NA	False	NA	NA	False	NA	NA	NA	12776383	12775352	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_12775400_12776400
H1_mix_00042202	chr18	-	876	6	FSM	ENSG00000175354.20	ENST00000591305.5	876	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_5	203.08067362504	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGGAGAACAGTGAGAGG	-21	True	NA	NA	False	NA	NA	NA	12884222	12801988	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_12802152_12814202_12814356_12817155_12817366_12830942_12831042_12836790_12836892_12884072
H1_mix_00042205	chr18	-	5125	7	NNC	ENSG00000175322.12	novel	7112	6	NA	NA	32	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	17.7169096878911	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATAATTTTATATATATAT	36	False	NA	-6	True	AATAAA	-24	NA	14132396	14071123	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_14075425_14077328_14077527_14078199_14078299_14080188_14080267_14084876_14085077_14124349_14124477_14132274
H1_mix_00042209	chr18	-	1997	1	FSM	ENSG00000265296.1	ENST00000581547.1	1997	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCCCAGAACATCTGCAC	NA	False	NA	NA	False	NA	NA	NA	14393909	14391912	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_14391900_14393900
H1_mix_00042210	chr18	-	2374	1	FSM	ENSG00000265766.3	ENST00000617265.2	1100	1	-60	-1214	-60	1001	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCAAATCAAGCTGAGCTT	NA	False	NA	NA	False	NA	NA	NA	14479327	14476953	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_14477000_14479300
H1_mix_00042218	chr18	-	1537	2	FSM	ENSG00000266010.3	ENST00000584201.2	872	2	-151	-514	-29	0	multi-exon	FALSE	canonical	3	34	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCAGGCTGCCTGACGT	3575	False	NA	-10	True	AATAAA	-32	NA	22168582	22166897	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_22168163_22168310
H1_mix_00042219	chr18	-	1095	3	FSM	ENSG00000266010.3	ENST00000691935.1	1217	3	116	6	-6	-2	multi-exon	FALSE	canonical	3	34	junction_2	6	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACCAGGCTGCCTGAC	3720	False	NA	-12	True	AATAAA	-30	NA	22168437	22166899	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_22167309_22167603_22168163_22168310
H1_mix_00042221	chr18	-	2000	3	FSM	ENSG00000141458.13	ENST00000588867.1	2000	3	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_2	11.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAGCAAGTGATTTCA	NA	False	NA	-19	True	AATAAA	-27	NA	23535700	23531721	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_23532285_23533354_23534560_23535468
H1_mix_00042223	chr18	-	430	2	FSM	ENSG00000141458.13	ENST00000587163.1	431	2	1	0	1	0	multi-exon	FALSE	canonical	3	139	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCCATCCAGGGGATT	NA	False	NA	NA	False	AGTAAA	-19	NA	23534559	23533201	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_23533518_23534445
H1_mix_00042226	chr18	-	3520	15	NIC	ENSG00000141447.19	novel	3317	14	NA	NA	24	2295	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	104.194480640379	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCCCTGTGCTTCCTGAA	2	True	NA	NA	False	NA	NA	NA	24272208	24159749	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_24159829_24161896_24163282_24165064_24165156_24166578_24166703_24167328_24167446_24170326_24170454_24171408_24171499_24172375_24172484_24178012_24178196_24179737_24179836_24181144_24181280_24196124_24196201_24225041_24225199_24239219_24239383_24271621
H1_mix_00042229	chr18	-	1889	5	FSM	ENSG00000141447.19	ENST00000399441.4	1887	5	0	-2	0	2	multi-exon	FALSE	canonical	3	28	junction_4	102.942945362953	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCTCATCATTTTTCTT	32	True	NA	-11	True	AATAAA	-17	NA	24397788	24357122	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_24358512_24366891_24366967_24368286_24368373_24377412_24377536_24397572
H1_mix_00042232	chr18	-	4327	7	FSM	ENSG00000198795.11	ENST00000584787.5	4327	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	25.6087007783596	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACTATGACCAAAATGGC	13	True	NA	NA	False	ATTAAA	-9	NA	25352148	25062424	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_25062742_25089464_25089581_25091949_25092082_25195159_25195245_25224344_25227698_25322007_25322188_25352004
H1_mix_00042233	chr18	-	338	2	FSM	ENSG00000198795.11	ENST00000577461.1	338	2	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAAGAGGCCGGAAGAC	-25	True	NA	NA	False	NA	NA	NA	25351193	25322136	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_25322188_25350906
H1_mix_00042241	chr18	-	3891	16	NNC	ENSG00000170558.10	novel	4016	16	NA	NA	-19549	5642	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	292.661579302784	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCCTTCCTGGAAAGTAT	NA	False	NA	NA	False	NA	NA	NA	28065145	27945323	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_27945352_27950968_27952360_27963356_27963522_27982943_27983084_27984999_27985234_27985527_27985762_27988523_27988667_27990096_27990351_27992654_27992841_27993499_27993638_28002996_28003170_28005848_28005994_28009716_28009873_28011845_28011993_28013682_28013910_28065015
H1_mix_00042253	chr18	-	4597	2	NIC	ENSG00000268573.1	novel	4382	2	NA	NA	4	172	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCCAGTTGACACTGACT	24	True	NA	61	True	TTTAAA	-38	NA	35290197	35280694	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_35285178_35290083
H1_mix_00042264	chr18	-	2679	2	FSM	ENSG00000134779.15	ENST00000590258.2	2679	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTTATGTTCTTTAAAGA	NA	False	NA	-12	True	AATAAA	-19	NA	36798585	36777646	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_36780189_36798448
H1_mix_00042275	chr18	-	1341	12	NNC	ENSG00000078043.16	novel	11243	14	NA	NA	3	3890	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	117.599474334014	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGCCTGGTTGAATAAT	NA	False	NA	-6	True	AATAAA	-30	NA	46864229	46808389	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_46808563_46815311_46815350_46820932_46821073_46827958_46828131_46829733_46829868_46836356_46836518_46844053_46844128_46844733_46844840_46846706_46846842_46855344_46855436_46855564_46855616_46864163
H1_mix_00042284	chr18	-	2821	13	NIC	ENSG00000175387.16	novel	12075	11	NA	NA	-398	-167	combination_of_known_junctions	FALSE	canonical	3	18	junction_11	132.219724532898	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTATTCCCACTTCTCT	9	True	NA	-36	True	TATAAA	-15	NA	47931544	47841391	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_47841951_47845339_47845485_47845662_47845801_47848474_47848688_47851273_47851328_47865058_47865134_47868322_47868458_47869242_47869437_47870474_47870565_47896520_47896810_47920071_47920170_47930360_47930447_47930799
H1_mix_00042289	chr18	-	2362	16	NIC	ENSG00000141627.14	novel	5049	17	NA	NA	1	2	combination_of_known_splicesites	FALSE	canonical	1	6	junction_2	45.8711238144434	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCAGTTTTATTTCGAAG	58	False	NA	-22	True	AATAAA	-21	NA	49460626	49043801	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_49044205_49097401_49097516_49163684_49163788_49257009_49257105_49258379_49258494_49272177_49272304_49281996_49282176_49286433_49286617_49331863_49332007_49333727_49333854_49363160_49363234_49378566_49378701_49379664_49379759_49391592_49391646_49430254_49430448_49460397
H1_mix_00042297	chr18	-	5012	16	NIC	ENSG00000141644.18	novel	2473	17	NA	NA	0	464	combination_of_known_junctions	FALSE	canonical	3	77	junction_5	42.0963973122008	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACGACCTAGGACGTTCGA	11	True	NA	NA	False	GGGGCT	-1	NA	50281500	50268376	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274976_50275046_50275128_50275246_50275369_50275445_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
H1_mix_00042328	chr18	-	1248	9	NNC	ENSG00000091164.13	novel	6840	8	NA	NA	0	50258	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	289.182792537869	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTGTATCTGTGAGAGA	14	True	NA	NA	False	AAAAAG	-4	NA	56638592	56546950	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_56546978_56602827_56603057_56610992_56611098_56614423_56614597_56616244_56616315_56618003_56618127_56624287_56624462_56626360_56626458_56638342
H1_mix_00042333	chr18	-	1703	3	FSM	ENSG00000258609.3	ENST00000643706.1	766	3	-50	-887	-50	887	multi-exon	FALSE	canonical	3	3	junction_1	18.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATCTTGCATTGGTTTTT	NA	False	NA	-3	True	AATAAA	-30	NA	57072169	57062667	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_57063911_57069809_57070004_57071903
H1_mix_00042347	chr18	-	442	4	FSM	ENSG00000074695.6	ENST00000587940.1	442	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	275.474540061731	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAGGAATTCCA	7827	False	NA	NA	False	AAAAAG	-45	NA	59351589	59345970	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_59346052_59347512_59347572_59349112_59349237_59351411
H1_mix_00042348	chr18	-	1181	5	FSM	ENSG00000074695.6	ENST00000587561.1	1181	5	0	0	0	0	multi-exon	FALSE	canonical	3	604	junction_2	25.5868618630734	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGGGAGATCAGGAAGTTC	-5	True	NA	NA	False	NA	NA	NA	59359265	59352680	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_59353302_59354518_59354581_59355312_59355421_59355503_59355659_59359030
H1_mix_00042351	chr18	-	6530	30	FSM	ENSG00000197563.11	ENST00000639912.1	6530	30	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_19	53.9427626369255	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTCAACTTTCTACCTT	3	True	NA	NA	False	NA	NA	NA	62187017	62042470	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_62045980_62072672_62072726_62074778_62074822_62082672_62082747_62084530_62084607_62085208_62085265_62088755_62088843_62090475_62090579_62095847_62095951_62101074_62101184_62102793_62102903_62105542_62105635_62106788_62106882_62106985_62107086_62109833_62109974_62113133_62113317_62114560_62114640_62138242_62138299_62138982_62139076_62143305_62143347_62145908_62146026_62146970_62147102_62148213_62148339_62154544_62154652_62157128_62157228_62157686_62157809_62161132_62161386_62162252_62162330_62163530_62163657_62186843
H1_mix_00042366	chr18	-	5218	7	ISM	ENSG00000166479.10	ENST00000299608.7	4737	16	25048	1050	1293	-1050	3prime_fragment	FALSE	canonical	3	124	junction_5	10.2415276638248	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTACTTTGGGAGATGTT	NA	False	NA	-7	True	ATTAAA	-13	NA	68690060	68674737	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr18_-_68677194_68679462_68679532_68680980_68681111_68682924_68682982_68684189_68684244_68684427_68684486_68687666
H1_mix_00042373	chr18	-	2105	5	NNC	ENSG00000263146.3	novel	1256	2	NA	NA	-923	-12	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	23.7907545067406	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGCCTGAGTTGCAAC	7	True	NA	-11	True	AATAAA	-11	NA	78979997	78976819	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_78977430_78977554_78977691_78977807_78977933_78978462_78978739_78979039
H1_mix_00042374	chr18	-	2209	4	NNC	ENSG00000263146.3	novel	1256	2	NA	NA	-913	-15	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	24.7116706571342	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTTAAGCCTGAGTTGC	47	False	NA	-14	True	AATAAA	-8	NA	78979987	78976822	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_-_78977430_78977554_78977933_78978462_78978739_78979039
H1_mix_00042375	chr18	-	2431	5	FSM	ENSG00000122490.19	ENST00000474967.5	2319	5	-17	-95	-17	0	multi-exon	FALSE	canonical	2	8	junction_3	77.7576362809467	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGCCTTGGGCAGAGGGA	-24	True	NA	-1	True	AATAAA	-18	NA	79951674	79902419	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_79904184_79943328_79943463_79949518_79949656_79950723_79951026_79951580
H1_mix_00042376	chr18	-	1247	4	FSM	ENSG00000122490.19	ENST00000590381.5	1247	4	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	40.5709255502016	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGCGGCTGTGCGGACGC	-3	True	NA	NA	False	GGGGCT	-22	NA	79951653	79903445	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_79904184_79943328_79943463_79950723_79951026_79951580
H1_mix_00042378	chr18	-	803	4	FSM	ENSG00000141759.15	ENST00000355491.5	803	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	636.689528385347	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGAGAGGAGCAGGCCT	26	True	NA	36	True	AATAAA	-8	NA	79988536	79973524	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_79973857_79976717_79976788_79977597_79977702_79988239
H1_mix_00042382	chr18	+	261	1	Intergenic	novelGene_589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAATCTTCTCACCAT	NA	False	NA	NA	False	NA	NA	NA	3581382	3581643	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr18_+_3581400_3581600
H1_mix_00042383	chr18	+	651	1	Intergenic	novelGene_591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAACCCCGCAGTTCACTA	NA	False	NA	NA	False	NA	NA	NA	11622467	11623118	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr18_+_11622500_11623100
H1_mix_00042384	chr18	+	4474	1	Intergenic	novelGene_593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTGATATGTGGCAAAT	1364	False	NA	NA	False	NA	NA	NA	23228782	23233256	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr18_+_23228800_23233300
H1_mix_00042385	chr18	+	290	1	Intergenic	novelGene_595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCATGCACCCCTTACCAT	NA	False	NA	NA	False	NA	NA	NA	23286692	23286982	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr18_+_23286700_23287000
H1_mix_00042391	chr18	+	3189	14	FSM	ENSG00000101557.15	ENST00000578942.5	3189	14	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	154.355656323483	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAAAATT	6	True	NA	NA	False	NA	NA	NA	158560	212601	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_158715_163307_163454_166786_166820_180235_180340_192841_192901_196636_196768_197615_197697_198046_198133_199201_199317_202879_202946_203097_203191_204563_204693_209970_210494_211132
H1_mix_00042402	chr18	+	4688	4	FSM	ENSG00000263753.9	ENST00000656810.1	4669	4	-19	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	20.8326666559997	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGGTACTCAAAACTCATG	-39	True	NA	5	True	ATTAAA	-24	NA	5238061	5246494	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_5239050_5240647_5241256_5241698_5241890_5243593
H1_mix_00042430	chr18	+	901	5	NNC	ENSG00000263917.1	novel	565	5	NA	NA	-116	-23636	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_4	23.6959912221456	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAATTGGCACTGGTCAT	21	False	NA	16	True	AATAAA	-18	NA	32018712	32088143	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr18_+_32019028_32037115_32037270_32042178_32042274_32045641_32045733_32087897
H1_mix_00042436	chr18	+	3831	1	NIC	ENSG00000134769.23	novel	6490	22	NA	NA	5483	4	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTGGGTGGTTTATTCC	NA	False	NA	19	True	ATTAAA	-21	NA	34887571	34891402	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_+_34887600_34891400
H1_mix_00042453	chr18	+	4309	27	FSM	ENSG00000049759.20	ENST00000635997.1	4402	27	93	0	93	0	multi-exon	FALSE	canonical	0	0	junction_1	77.2666557751438	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGAGCATTTTTTTTTTTT	17	False	NA	21	True	ATTAAA	-22	NA	58255532	58396705	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_+_58256775_58315981_58316033_58322424_58322487_58323231_58323335_58324995_58325163_58328994_58329128_58330737_58330915_58333817_58333893_58335477_58335538_58341037_58341170_58341677_58341798_58342905_58343104_58349536_58349615_58350990_58351046_58357193_58357253_58364267_58364334_58365998_58366229_58367745_58367868_58370396_58370468_58373173_58373270_58383245_58383320_58385525_58385587_58387438_58387499_58389084_58389193_58390645_58390743_58391486_58391560_58396166
H1_mix_00042455	chr18	+	5606	9	NIC	ENSG00000074657.14	novel	5324	10	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	112.9772515819	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTGTGCTTCTGTGAGA	26	True	NA	24	True	AATAAA	-14	NA	58862961	58985944	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_+_58863167_58918270_58920634_58934432_58934615_58939444_58939622_58948066_58948230_58953517_58953800_58979054_58979168_58981469_58981618_58983971
H1_mix_00042456	chr18	+	4708	10	NIC	ENSG00000074657.14	novel	598	5	NA	NA	7	-39	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	99.7605775820598	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTGTGGACGTGCCTTT	32	False	NA	NA	False	NA	NA	NA	58864415	58985027	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_+_58864530_58865469_58865580_58918270_58920634_58934432_58934615_58939444_58939622_58948066_58948230_58953517_58953800_58979054_58979168_58981469_58981618_58983971
H1_mix_00042488	chr18	-	6229	20	FSM	ENSG00000101577.10	ENST00000261596.8	6229	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	14.5760019825401	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATTTGGCTCTTTTCTTC	1404	False	NA	NA	False	AATAAA	-21	NA	3011947	2916993	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_2920438_2920777_2920882_2921532_2921648_2922046_2922200_2923774_2923862_2924397_2924547_2925223_2925369_2926722_2926806_2927721_2927812_2928590_2928661_2929064_2929159_2931255_2931444_2934350_2934451_2937691_2938038_2939479_2939604_2940604_2940713_2951054_2951357_2954503_2954600_2960648_2960850_3011717
H1_mix_00042493	chr18	-	3664	2	ISM	ENSG00000206432.4	ENST00000581347.2	10638	3	0	7348	0	765	intron_retention	FALSE	canonical	3	43	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTTAAACATAATATTGCC	NA	False	NA	-11	True	AATAAA	-18	NA	5895955	5889419	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr18_-_5892158_5895029
H1_mix_00042504	chr18	-	8305	37	NIC	ENSG00000154864.14	novel	10859	56	NA	NA	0	264	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	14.7349002015832	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGTCATCATAAAACTTT	-18	True	NA	0	True	AATAAA	-20	NA	11149569	10712787	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_10714931_10715649_10715817_10718199_10718260_10731406_10731522_10735231_10735331_10736603_10736711_10741030_10741103_10742493_10742616_10744141_10744232_10748470_10748631_10750090_10750188_10752635_10752880_10757968_10758135_10759481_10759584_10759704_10759910_10760910_10761112_10762499_10762626_10762921_10763099_10770147_10770309_10773411_10773630_10784783_10784958_10787035_10787185_10789078_10789366_10791200_10791325_10794771_10795003_10797373_10797523_10800336_10800476_10801389_10801429_10803874_10803995_10807111_10807275_10855352_10855567_10857000_10857212_10871252_10871416_10911185_10911229_10979534_10979661_11066126_11066223_11148524
H1_mix_00042505	chr18	-	1831	10	FSM	ENSG00000154889.17	ENST00000344987.11	1831	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	22.2660678562196	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGTTTCCCTCTTCCTGT	340	False	NA	-23	True	AATAAA	-6	NA	11908330	11884067	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_11884628_11885675_11885817_11886498_11886622_11886916_11887026_11888668_11888744_11889386_11889491_11893467_11893577_11896983_11897357_11906202_11906310_11908200
H1_mix_00042521	chr18	-	1929	6	NIC	ENSG00000141447.19	novel	1887	5	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_3	124.488393033246	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTCTCATCATTTTTC	NA	False	NA	-13	True	AATAAA	-15	NA	24397868	24357124	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_24358512_24366891_24366967_24368286_24368373_24368545_24368590_24377412_24377536_24397654
H1_mix_00042522	chr18	-	1799	4	NIC	ENSG00000141447.19	novel	1887	5	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	131.403534537275	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTCTCATCATTTTTC	NA	False	NA	-13	True	AATAAA	-15	NA	24397868	24357124	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_24358512_24366891_24366967_24377412_24377536_24397654
H1_mix_00042530	chr18	-	4382	2	FSM	ENSG00000268573.1	ENST00000586922.2	4382	2	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGGAAATAAATCAA	20	True	NA	NA	False	TTTAAA	-22	NA	35290201	35280866	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_35285178_35290130
H1_mix_00042548	chr18	-	584	6	FSM	ENSG00000265681.8	ENST00000581373.5	584	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	4874.62612309908	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTTGGTTGTCTTTATT	-28	True	NA	-32	True	AATAAA	-18	NA	49492479	49488483	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491531_49491585_49492457
H1_mix_00042569	chr18	-	1731	5	FSM	ENSG00000197563.11	ENST00000589720.6	1853	5	0	122	0	2	multi-exon	FALSE	canonical	3	117	junction_4	38.2058568808501	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAACTTAATGTGCTAATA	5	True	NA	NA	False	AAGAAA	-34	NA	62187015	62153566	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_62154652_62157128_62157228_62157686_62157809_62161132_62161386_62186843
H1_mix_00042575	chr18	-	5949	16	NIC	ENSG00000166479.10	novel	4737	16	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	6	junction_7	38.0890185399064	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATTGTTTCTTATTTTTA	-17	True	NA	-4	True	AATAAA	-15	NA	68715035	68673691	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr18_-_68677194_68679462_68679532_68680980_68681111_68682924_68682982_68684189_68684244_68684427_68684486_68687666_68689055_68691294_68691362_68697225_68697304_68697931_68698032_68700404_68700486_68701744_68701791_68710020_68710145_68711363_68711404_68713845_68713901_68714935
H1_mix_00042587	chr18	-	546	4	FSM	ENSG00000141759.15	ENST00000592957.1	546	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	696.500299114556	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCCTACTTGTTTGTTC	76	False	NA	-25	True	AATAAA	-20	NA	80033891	79973512	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr18_-_79973857_79977597_79977702_80030520_80030578_80033850
H1_mix_00042594	chr19	+	2608	1	FSM	ENSG00000282798.1	ENST00000631744.1	806	1	-1592	-210	-1592	210	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATAATGGTGGGTTTTT	NA	False	NA	NA	False	NA	NA	NA	67574	70182	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_67600_70200
H1_mix_00042595	chr19	+	1105	3	FSM	ENSG00000099866.16	ENST00000382683.8	603	3	-124	-378	-78	0	multi-exon	FALSE	canonical	2	4	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACGTGTCAGTTTTCTCA	7216	False	NA	24	True	AATAAA	-16	NA	496375	505343	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_496552_498495_498826_504744
H1_mix_00042597	chr19	+	1541	5	FSM	ENSG00000099866.16	ENST00000215637.8	1541	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	3.8405728739343	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACGTGTCAGTTTTCTCA	1	True	NA	24	True	AATAAA	-16	NA	496485	505343	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_496552_497832_498118_498495_498826_501668_501930_504744
H1_mix_00042599	chr19	+	1117	2	FSM	ENSG00000141933.9	ENST00000359315.6	1114	2	-3	0	-3	0	multi-exon	FALSE	canonical	3	207	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGGTGTGTATGCGAGCG	-4	True	NA	6	True	AATAAA	-18	NA	507493	519654	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_507845_518888
H1_mix_00042600	chr19	+	2351	1	FSM	ENSG00000141933.9	ENST00000588278.1	2873	1	519	3	519	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTCAAAAAAAAAAAAAGAGA	521	False	NA	NA	False	NA	NA	NA	508018	510369	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_508000_510400
H1_mix_00042601	chr19	+	1423	5	FSM	ENSG00000099804.9	ENST00000215574.9	1418	5	0	-5	0	0	multi-exon	FALSE	canonical	3	1642	junction_4	82.1416459538035	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGCTGTGCTTGGGAGG	1	True	NA	41	True	AATAAA	-20	NA	531759	542092	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_532109_535836_535924_536242_536341_537012_537148_541338
H1_mix_00042602	chr19	+	1147	5	FSM	ENSG00000099804.9	ENST00000586283.6	1147	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	765.47971070434	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGCTGTGCTTGGGAGG	273	False	NA	41	True	AATAAA	-20	NA	532031	542092	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_532109_535836_535924_536242_536341_537012_537148_541342
H1_mix_00042605	chr19	+	1802	8	FSM	ENSG00000172270.22	ENST00000545507.6	1795	8	-7	0	-7	0	multi-exon	FALSE	canonical	3	121	junction_1	2962.07784213331	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTCCTGGCTCCTGTCT	8758	False	NA	24	True	AATAAA	-24	NA	571269	583493	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_571580_579499_579657_580378_580462_580645_580783_581314_581592_582305_582331_582513_582583_582749
H1_mix_00042606	chr19	+	1616	8	FSM	ENSG00000172270.22	ENST00000679472.1	1610	8	-6	0	-6	0	multi-exon	FALSE	canonical	3	20	junction_6	2972.05356751241	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCCTCCCACCCACCGCC	997	False	NA	-27	True	NA	NA	NA	572522	583442	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_572702_579499_579657_580378_580462_580645_580783_581314_581592_582305_582331_582517_582583_582749
H1_mix_00042607	chr19	+	1636	8	FSM	ENSG00000172270.22	ENST00000680065.1	1630	8	-6	0	-6	0	multi-exon	FALSE	canonical	0	0	junction_7	3038.15017564898	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATAAAGATCGCCCCCAC	997	False	NA	-7	True	NA	NA	NA	572522	583462	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_572702_579499_579657_580378_580462_580645_580783_581314_581592_582305_582331_582513_582579_582749
H1_mix_00042608	chr19	+	969	4	FSM	ENSG00000172270.22	ENST00000572899.6	946	4	-23	0	0	0	multi-exon	FALSE	canonical	3	8583	junction_3	92.7373830891417	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGCCGTCTGCCCTCCTG	9	True	NA	NA	False	NA	NA	NA	572570	581591	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_572702_579499_579657_580378_580783_581314
H1_mix_00042609	chr19	+	1598	8	FSM	ENSG00000172270.22	ENST00000353555.9	1598	8	0	0	0	0	multi-exon	FALSE	canonical	3	8064	junction_7	321.798390427349	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTCCTGGCTCCTGTCT	-1	True	NA	24	True	AATAAA	-24	NA	572595	583493	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_572702_579499_579657_580378_580462_580645_580783_581314_581592_582305_582331_582513_582583_582749
H1_mix_00042610	chr19	+	1946	9	FSM	ENSG00000172270.22	ENST00000333511.9	1946	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3708.19416124615	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTCCTGGCTCCTGTCT	-1	True	NA	24	True	AATAAA	-24	NA	572595	583493	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_572702_577773_578122_579499_579657_580378_580462_580645_580783_581314_581592_582305_582331_582513_582583_582749
H1_mix_00042611	chr19	+	2141	7	FSM	ENSG00000172270.22	ENST00000571735.3	2141	7	0	0	0	0	multi-exon	FALSE	canonical	3	8064	junction_6	337.903709163819	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTCTCCTGGCTCCTGTC	6253	False	NA	23	True	AATAAA	-23	NA	578849	583492	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_579657_580378_580462_580645_580783_581314_581592_582305_582331_582513_582583_582749
H1_mix_00042612	chr19	+	1295	3	FSM	ENSG00000070388.12	ENST00000586042.6	1288	3	-10	3	6	-3	multi-exon	FALSE	canonical	3	6	junction_2	3	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAACTTTGTGGTCTTTTG	12	False	NA	1	True	AATAAA	-12	NA	639884	644368	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_640140_643234_643339_643432
H1_mix_00042613	chr19	+	1292	3	FSM	ENSG00000070388.12	ENST00000215530.7	1329	3	35	2	19	0	multi-exon	FALSE	canonical	2	3	junction_2	4.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTGGTCTTTTGTTA	41	False	NA	4	True	AATAAA	-15	NA	639913	644371	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_640140_643234_643339_643409
H1_mix_00042615	chr19	+	537	2	FSM	ENSG00000070404.10	ENST00000589185.2	537	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCGGCGCCCTGCCCTGTG	118	False	NA	NA	False	NA	NA	NA	680033	681413	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_680490_681332
H1_mix_00042617	chr19	+	2132	3	FSM	ENSG00000070404.10	ENST00000592947.5	2144	3	11	1	3	-1	multi-exon	FALSE	canonical	3	17	junction_1	9	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGGTGTCCAGGCCTCAG	802	False	NA	7	True	AATAAA	-14	NA	680717	683391	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_680880_681332_681561_681649
H1_mix_00042618	chr19	+	2804	8	FSM	ENSG00000099864.18	ENST00000264560.11	2755	8	-49	0	-45	0	multi-exon	FALSE	canonical	3	16	junction_1	9.41774269934258	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGGAGTTCTTGCCTT	NA	False	NA	18	True	AATAAA	-18	NA	708889	748329	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_709152_726137_726190_727007_727089_727563_727695_731094_731246_734172_734195_736018_736079_746284
H1_mix_00042619	chr19	+	2891	9	FSM	ENSG00000099864.18	ENST00000338448.10	2891	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	14.6196571437226	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGGAGTTCTTGCCTT	-8	True	NA	18	True	AATAAA	-18	NA	708934	748329	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_709152_726137_726190_727007_727089_727563_727695_731094_731246_734172_734195_736018_736079_740351_740484_746284
H1_mix_00042620	chr19	+	2869	5	FSM	ENSG00000099812.9	ENST00000215582.8	2885	5	16	0	16	0	multi-exon	FALSE	canonical	1	1	junction_3	1.6583123951777	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTGGTCCCTGCCTGGT	-3	True	NA	NA	False	AATAAA	-17	NA	751127	764318	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_751172_756889_758727_759908_760040_761624_761664_763500
H1_mix_00042622	chr19	+	3605	14	FSM	ENSG00000011304.22	ENST00000635647.1	3691	14	86	0	86	0	multi-exon	TRUE	canonical	3	1161	junction_8	232.911136773526	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGCTGGCTTCCTCTTTC	NA	False	NA	40	True	AATAAA	-30	NA	797160	812327	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_797506_799412_799444_803560_803637_804035_804209_804291_804703_804828_804940_805012_805188_805491_805570_806407_806557_807868_807903_808359_808453_808545_808763_810542_810621_810693
H1_mix_00042623	chr19	+	3182	14	FSM	ENSG00000011304.22	ENST00000349038.8	3155	14	-27	0	0	0	multi-exon	FALSE	canonical	3	571	junction_8	334.317320828457	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCGTTCCGCCTTCGTTG	NA	False	NA	25	True	AATAAA	-15	NA	797397	812312	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_797506_799412_799444_803560_803637_804035_804209_804291_804439_804531_804703_804828_804940_805012_805188_806407_806557_807868_807903_808359_808453_808545_808763_810542_810621_810693
H1_mix_00042625	chr19	+	3206	15	FSM	ENSG00000011304.22	ENST00000356948.11	3206	15	0	0	0	0	multi-exon	FALSE	canonical	3	1161	junction_9	225.320146385863	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCGTTCCGCCTTCGTTG	1	True	NA	25	True	AATAAA	-15	NA	797451	812312	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_797506_799412_799444_803560_803637_804035_804209_804291_804439_804531_804703_804828_804940_805012_805188_805491_805570_806407_806557_807868_807903_808359_808453_808545_808763_810542_810621_810693
H1_mix_00042626	chr19	+	3197	14	NIC	ENSG00000011304.22	novel	3206	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_10	493.025126284583	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCGTTCCGCCTTCGTTG	11	False	NA	25	True	AATAAA	-15	NA	797426	812312	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_797506_799412_799444_803560_803637_804035_804209_804291_804439_804531_804703_804828_804940_805012_805188_805491_805570_806407_806557_808359_808453_808545_808763_810542_810621_810693
H1_mix_00042627	chr19	+	3824	15	FSM	ENSG00000011304.22	ENST00000679114.1	3233	15	-591	0	347	0	multi-exon	FALSE	canonical	3	71	junction_1	471.743601451259	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTACCTGGACTTCGAAT	386	False	NA	-12	True	NA	NA	NA	797836	812275	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_798546_799412_799444_803560_803637_804035_804209_804291_804439_804531_804703_804828_804940_805012_805188_805491_805570_806407_806557_807868_807903_808359_808453_808545_808763_810542_810621_810693
H1_mix_00042628	chr19	+	4691	14	FSM	ENSG00000011304.22	ENST00000350092.8	3069	14	-1569	-53	347	0	multi-exon	FALSE	canonical	3	1161	junction_8	233.057881933568	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTACCTGGACTTCGAAT	386	False	NA	-12	True	NA	NA	NA	797836	812275	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_799444_803560_803637_804035_804209_804291_804439_804531_804703_804828_804940_805012_805188_805491_805570_806407_806557_807868_807903_808359_808453_808545_808763_810542_810621_810693
H1_mix_00042631	chr19	+	1217	4	FSM	ENSG00000011304.22	ENST00000585856.2	1217	4	0	0	0	0	multi-exon	FALSE	canonical	3	1760	junction_1	52.7825728815866	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTGACTGTGGCAGCG	340	False	NA	54	True	NA	NA	NA	807858	811021	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_808453_808545_808763_810542_810621_810693
H1_mix_00042632	chr19	+	902	5	FSM	ENSG00000172232.10	ENST00000233997.4	907	5	0	5	0	-4	multi-exon	FALSE	canonical	1	1	junction_1	2	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTCCTGGTTTCTGTTC	2	True	NA	3	True	AATAAA	-16	NA	827836	832013	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_827905_828229_828387_829561_829707_830707_830942_831715
H1_mix_00042633	chr19	+	1077	4	FSM	ENSG00000196415.10	ENST00000544537.2	1036	4	39	-80	39	80	multi-exon	FALSE	canonical	2	5	junction_1	0.471404520791032	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCTCCTGTCTGTCCT	57	False	NA	NA	False	AATAAA	-13	NA	843379	848255	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_843627_843892_844035_846146_846378_847798
H1_mix_00042634	chr19	+	2078	4	ISM	ENSG00000197766.8	ENST00000327726.11	1191	5	997	-1012	997	1012	3prime_fragment	FALSE	canonical	3	14	junction_1	3.2659863237109	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTGGCGGATGCCTGTA	-2	True	NA	NA	False	AATACA	-16	NA	860660	864653	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_860774_860860_861006_861698_861957_863091
H1_mix_00042635	chr19	+	1779	5	FSM	ENSG00000116014.10	ENST00000234371.10	1624	5	-164	9	-118	-9	multi-exon	TRUE	canonical	3	12	junction_1	3.69966214673719	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCTCATTGTCTTGTAG	7676	False	NA	48	True	NA	NA	NA	917168	920996	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_917747_918543_918669_919489_919626_919873_920107_920289
H1_mix_00042636	chr19	+	6063	9	NIC	ENSG00000116017.11	novel	1016	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	48.1111993199089	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCCTGTGGTGTTTTTTT	25	True	NA	28	True	ATTAAA	-35	NA	925780	975939	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_925921_929261_929897_932417_932743_960091_960165_964247_964432_964832_965081_966571_966869_968404_968504_971877
H1_mix_00042637	chr19	+	5962	9	FSM	ENSG00000116017.11	ENST00000263620.8	5948	9	-14	0	-14	0	multi-exon	FALSE	canonical	3	23	junction_1	52.6270783437576	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCCTGTGGTGTTTTTTT	-3	True	NA	28	True	ATTAAA	-35	NA	926020	975939	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_926060_929261_929897_932417_932743_960091_960165_964247_964432_964832_965081_966571_966869_968404_968504_971877
H1_mix_00042638	chr19	+	551	2	FSM	ENSG00000116017.11	ENST00000585733.2	581	2	0	30	0	-30	multi-exon	FALSE	canonical	3	169	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACATTACCAATCCATCAC	5135	False	NA	NA	False	NA	NA	NA	964288	965240	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_964432_964832
H1_mix_00042639	chr19	+	2816	1	ISM	ENSG00000116017.11	ENST00000263620.8	5948	9	47089	0	6337	0	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCCTGTGGTGTTTTTTT	NA	False	NA	28	True	ATTAAA	-35	NA	973123	975939	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_973100_975900
H1_mix_00042640	chr19	+	1534	10	FSM	ENSG00000065268.11	ENST00000585809.6	1521	10	-13	0	0	0	multi-exon	FALSE	canonical	3	1034	junction_5	60.4797690896369	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTCTCCGGCCTCCTTG	-4	True	NA	27	True	NA	NA	NA	984331	994557	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_984564_985864_985976_989761_989896_990222_990365_990851_990996_991080_991146_991226_991352_991954_992122_994019_994089_994212
H1_mix_00042642	chr19	+	528	2	FSM	ENSG00000116032.5	ENST00000588335.1	528	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTACGAGTGGCGTAGCC	4148	False	NA	NA	False	NA	NA	NA	1004534	1005279	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1004585_1004801
H1_mix_00042643	chr19	+	2556	7	FSM	ENSG00000064666.15	ENST00000263097.9	2149	7	-408	1	-386	0	multi-exon	FALSE	canonical	3	3420	junction_6	186.293451307339	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGTGGCCAAGAGAGTT	4345	False	NA	29	True	AATAAA	-19	NA	1026199	1039064	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1026725_1031070_1031193_1032391_1032459_1032558_1032697_1036129_1036247_1036415_1036563_1037624
H1_mix_00042644	chr19	+	2439	6	FSM	ENSG00000064666.15	ENST00000348419.7	2033	6	-410	4	-386	0	multi-exon	FALSE	canonical	3	223	junction_4	1412.34791747643	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGTGGCCAAGAGAGTT	4345	False	NA	29	True	AATAAA	-19	NA	1026199	1039064	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1026725_1031070_1031193_1032391_1032459_1032558_1032697_1036415_1036563_1037624
H1_mix_00042645	chr19	+	2682	8	FSM	ENSG00000064666.15	ENST00000568865.3	1492	8	-431	-759	-386	0	multi-exon	FALSE	canonical	3	63	junction_6	1638.84444107451	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGCCAAGAGAGTTGGCG	4345	False	NA	33	True	AATAAA	-23	NA	1026199	1039068	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1026725_1031070_1031193_1032391_1032459_1032558_1032697_1036129_1036247_1036415_1036563_1036878_1037001_1037624
H1_mix_00042646	chr19	+	2266	1	FSM	ENSG00000064666.15	ENST00000564572.1	2266	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	217	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGTGGCCAAGAGAGTT	327	False	NA	29	True	AATAAA	-19	NA	1036798	1039064	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1036800_1039100
H1_mix_00042649	chr19	+	6815	47	FSM	ENSG00000064687.13	ENST00000263094.11	6815	47	0	0	0	0	multi-exon	TRUE	canonical	3	45	junction_6	26.1429471598054	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGTGCATGTGTGTCCTT	-23	True	NA	25	True	AATAAA	-33	NA	1040106	1065572	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1040197_1041224_1041428_1041509_1041604_1041830_1041973_1042063_1042177_1042314_1042398_1042745_1042827_1043040_1043252_1043333_1043474_1043724_1043842_1044576_1044745_1045001_1045232_1046229_1046407_1046801_1047025_1047156_1047379_1047452_1047655_1048894_1049006_1049265_1049438_1050920_1051053_1051154_1051295_1051448_1051587_1051941_1052127_1052213_1052287_1053328_1053532_1053787_1053837_1054005_1054111_1054192_1054342_1054569_1054695_1054779_1054879_1055096_1055352_1055906_1055940_1056065_1056244_1056329_1056500_1056906_1057085_1057313_1057430_1057914_1058060_1058145_1058270_1058617_1058748_1058819_1058941_1059022_1059086_1061781_1061889_1062171_1062314_1063543_1063679_1063759_1063864_1064160_1064254_1064930_1065172_1065269
H1_mix_00042650	chr19	+	1918	14	FSM	ENSG00000064687.13	ENST00000525073.6	1918	14	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	36.2140252015952	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCGTGTGCATGTGTGTC	5804	False	NA	22	True	AATAAA	-30	NA	1056933	1065569	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1057085_1057313_1057430_1057968_1058060_1058145_1058270_1058617_1058748_1058819_1058941_1059022_1059086_1061781_1061889_1062171_1062314_1063543_1063679_1063759_1063864_1064160_1064254_1064930_1065172_1065269
H1_mix_00042652	chr19	+	3523	22	NIC	ENSG00000180448.11	novel	4272	23	NA	NA	7	221	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	77.8416614868834	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCACCCCGGCTCAGCT	5	True	NA	NA	False	NA	NA	NA	1067173	1086217	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_1067496_1073148_1073293_1073505_1073591_1073673_1073747_1073947_1074015_1074103_1074242_1074342_1074408_1074613_1074725_1074798_1074880_1077856_1078046_1079702_1079841_1079927_1080119_1080254_1080380_1080463_1080548_1080681_1080787_1080891_1081065_1081549_1081739_1081823_1081962_1082839_1083067_1083142_1083354_1084237_1084347_1085659
H1_mix_00042653	chr19	+	4279	23	FSM	ENSG00000180448.11	ENST00000313093.7	4272	23	-7	0	-7	0	multi-exon	FALSE	canonical	3	25	junction_1	80.6544127591334	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTGTGGCAGCTGCA	-9	True	NA	16	True	AATAAA	-16	NA	1067159	1086628	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1067496_1068413_1068745_1073148_1073293_1073505_1073591_1073673_1073747_1073947_1074015_1074103_1074242_1074342_1074408_1074613_1074725_1074798_1074880_1077856_1078046_1079702_1079841_1079927_1080119_1080254_1080380_1080463_1080548_1080681_1080787_1080891_1081065_1081549_1081739_1081823_1081962_1082839_1083067_1083142_1083354_1084237_1084347_1085659
H1_mix_00042654	chr19	+	3791	22	FSM	ENSG00000180448.11	ENST00000543365.5	3750	22	-69	28	-69	0	multi-exon	FALSE	canonical	3	79	junction_1	69.6480950411219	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGCTGAAATAAAAAGTTTT	3552	False	NA	-12	True	NA	NA	NA	1071151	1086600	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1071359_1073148_1073293_1073505_1073591_1073673_1073747_1073947_1074015_1074103_1074242_1074342_1074408_1074613_1074725_1074798_1074880_1077856_1078046_1079702_1079841_1079927_1080119_1080254_1080380_1080463_1080548_1080681_1080787_1080891_1081065_1081549_1081739_1081823_1081962_1082839_1083067_1083142_1083354_1084237_1084347_1085659
H1_mix_00042655	chr19	+	4195	13	FSM	ENSG00000180448.11	ENST00000590577.2	3218	13	-1005	28	-1005	0	multi-exon	FALSE	canonical	3	226	junction_3	24.9815209482707	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGCTGAAATAAAAAGTTTT	1227	False	NA	-12	True	NA	NA	NA	1076481	1086600	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1078046_1079702_1079841_1079927_1080119_1080254_1080380_1080463_1080548_1080681_1080787_1080891_1081065_1081549_1081739_1081823_1081962_1082839_1083067_1083142_1083354_1084237_1084347_1085659
H1_mix_00042658	chr19	+	826	6	FSM	ENSG00000167468.19	ENST00000589115.6	812	6	-14	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	1615.49665428313	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGATCTTTCTGCGT	0	True	NA	13	True	AATAAA	-13	NA	1103993	1106779	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1104128_1105185_1105281_1105365_1105511_1105657_1105810_1106399_1106460_1106539
H1_mix_00042659	chr19	+	873	7	FSM	ENSG00000167468.19	ENST00000588919.5	803	7	-79	9	0	0	multi-exon	FALSE	canonical	3	100	junction_5	1470.30971793927	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGATCTTTCTGCGT	0	True	NA	13	True	AATAAA	-13	NA	1103993	1106779	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1104128_1105185_1105281_1105365_1105511_1105657_1105810_1106241_1106267_1106377_1106460_1106539
H1_mix_00042660	chr19	+	859	7	FSM	ENSG00000167468.19	ENST00000354171.13	851	7	0	-8	0	-1	multi-exon	FALSE	canonical	3	3622	junction_1	229.609572003337	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTCTGCGTAGGGGCTT	0	True	NA	21	True	AATAAA	-21	NA	1103993	1106787	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1104128_1105185_1105281_1105365_1105511_1105657_1105810_1106241_1106267_1106399_1106460_1106539
H1_mix_00042661	chr19	+	1005	7	NIC	ENSG00000167468.19	novel	536	6	NA	NA	-56	-1	combination_of_known_junctions	FALSE	canonical	3	542	junction_1	1330.02443586575	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTCTGCGTAGGGGCTT	-10	True	NA	21	True	AATAAA	-21	NA	1104649	1106787	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_1104930_1105185_1105281_1105365_1105511_1105657_1105810_1106241_1106267_1106399_1106460_1106539
H1_mix_00042663	chr19	+	3293	10	FSM	ENSG00000118046.17	ENST00000326873.12	3293	10	0	0	0	0	multi-exon	FALSE	canonical	3	529	junction_1	27.5842144874363	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCCGTCTGGGTTTTGT	-1	True	NA	17	True	AATAAA	-21	NA	1205777	1228431	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1207204_1218416_1218501_1219323_1219414_1220372_1220506_1220580_1220718_1221212_1221341_1221948_1222007_1222984_1223173_1226453_1226664_1227592
H1_mix_00042664	chr19	+	2072	9	FSM	ENSG00000118046.17	ENST00000652231.1	2072	9	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_8	178.06459502102	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGCAGGGTGGATGCTT	345	False	NA	1	True	CATAAA	-14	NA	1206185	1223873	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1207204_1218416_1218501_1219323_1219414_1220372_1220506_1220580_1220718_1221212_1221341_1221948_1222007_1222984_1223173_1223637
H1_mix_00042667	chr19	+	3554	3	FSM	ENSG00000118046.17	ENST00000585465.2	3554	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	277.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGCTGTGAGGGGTGT	NA	False	NA	14	True	AATAAA	-13	NA	1223147	1228095	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1223173_1223637_1226664_1227592
H1_mix_00042669	chr19	+	704	5	FSM	ENSG00000099624.8	ENST00000395633.5	704	5	0	0	0	0	multi-exon	FALSE	canonical	3	744	junction_4	336.318301613219	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCTCGGCTCTTGTT	-40	True	NA	22	True	ATTAAA	-16	NA	1241745	1244825	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1241992_1242455_1242610_1244096_1244186_1244314_1244441_1244736
H1_mix_00042670	chr19	+	1019	4	FSM	ENSG00000099624.8	ENST00000215375.7	995	4	-24	0	-19	0	multi-exon	FALSE	canonical	3	1458	junction_3	48.2861838992849	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCTCGGCTCTTGTT	NA	False	NA	22	True	ATTAAA	-16	NA	1241726	1244825	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1241992_1242455_1242610_1244096_1244186_1244314
H1_mix_00042671	chr19	+	1168	4	FSM	ENSG00000099624.8	ENST00000590265.5	1144	4	-24	0	0	0	multi-exon	FALSE	canonical	3	744	junction_3	349.48470003071	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCTCGGCTCTTGTT	-40	True	NA	22	True	ATTAAA	-16	NA	1241745	1244825	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1242610_1244096_1244186_1244314_1244441_1244736
H1_mix_00042672	chr19	+	1393	3	FSM	ENSG00000099624.8	ENST00000588538.5	1393	3	0	0	0	0	multi-exon	FALSE	canonical	3	1458	junction_2	26	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCTCGGCTCTTGTT	31	True	NA	22	True	ATTAAA	-16	NA	1241816	1244825	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1242610_1244096_1244186_1244314
H1_mix_00042673	chr19	+	640	2	FSM	ENSG00000099624.8	ENST00000589478.1	640	2	0	0	0	0	multi-exon	FALSE	canonical	3	1458	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCTCGGCTCTTGTT	2271	False	NA	22	True	ATTAAA	-16	NA	1244056	1244825	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1244186_1244314
H1_mix_00042674	chr19	+	3790	8	FSM	ENSG00000167470.14	ENST00000300952.7	3793	8	0	3	0	-3	multi-exon	FALSE	canonical	3	52	junction_1	19.3822978355961	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATTGACTCCCGCCTGC	-3	True	NA	7	True	AATAAA	-14	NA	1248552	1259140	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1248661_1249889_1250530_1251561_1251650_1251838_1251902_1254166_1254479_1254901_1255062_1255421_1255695_1256994
H1_mix_00042675	chr19	+	3955	8	NNC	ENSG00000167470.14	novel	3793	8	NA	NA	-168	-3	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_5	30.1045796231357	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATTGACTCCCGCCTGC	59	False	NA	7	True	AATAAA	-14	NA	1248384	1259140	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_1248661_1249889_1250530_1251561_1251650_1251838_1251902_1254166_1254479_1254904_1255062_1255421_1255695_1256994
H1_mix_00042676	chr19	+	4087	9	FSM	ENSG00000167470.14	ENST00000682408.1	3892	9	-198	3	-168	-3	multi-exon	FALSE	canonical	3	47	junction_4	24.481817232387	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATTGACTCCCGCCTGC	59	False	NA	7	True	AATAAA	-14	NA	1248384	1259140	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1248661_1249889_1250530_1251561_1251650_1251838_1251902_1253953_1254083_1254166_1254479_1254901_1255062_1255421_1255695_1256994
H1_mix_00042679	chr19	+	1338	7	FSM	ENSG00000099622.14	ENST00000320936.9	1328	7	-10	0	0	0	multi-exon	FALSE	canonical	3	940	junction_6	96.3213660386705	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCTCTGACAATTCCCT	-6	True	NA	NA	False	ATTAAA	-18	NA	1269326	1273172	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1269411_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1272426
H1_mix_00042681	chr19	+	945	8	FSM	ENSG00000099622.14	ENST00000586636.5	938	8	-20	13	0	-13	multi-exon	FALSE	canonical	3	203	junction_6	421.221304963438	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGGACCTCGGTTCAGCG	-6	True	NA	75	True	AAGAAA	-4	NA	1269326	1274867	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1269411_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1274306_1274441_1274648
H1_mix_00042682	chr19	+	1096	7	FSM	ENSG00000099622.14	ENST00000589235.5	1073	7	-23	0	0	0	multi-exon	FALSE	canonical	3	203	junction_6	370.582724308022	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGTCTGTGGTTCAGGG	-6	True	NA	18	True	AATAAA	-23	NA	1269326	1274810	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1269411_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1274306
H1_mix_00042683	chr19	+	3351	6	FSM	ENSG00000099622.14	ENST00000587896.6	3346	6	-5	0	0	0	multi-exon	FALSE	canonical	3	1181	junction_2	11.1892805845595	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGTCTGTGGTTCAGGG	-6	True	NA	18	True	AATAAA	-23	NA	1269326	1274810	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1269411_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980
H1_mix_00042684	chr19	+	3036	6	FSM	ENSG00000099622.14	ENST00000587169.5	3028	6	-8	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	486.901797080274	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGTCTGTGGTTCAGGG	-6	True	NA	18	True	AATAAA	-23	NA	1269326	1274810	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1269411_1270927_1271037_1271328_1271468_1271550_1271633_1271980_1274441_1274648
H1_mix_00042685	chr19	+	3123	6	FSM	ENSG00000099622.14	ENST00000590347.5	3117	6	-6	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	512.394613554826	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGTCTGTGGTTCAGGG	-6	True	NA	18	True	AATAAA	-23	NA	1269326	1274810	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1269411_1270927_1271037_1271139_1271366_1271550_1271633_1271980_1274441_1274648
H1_mix_00042686	chr19	+	1087	3	FSM	ENSG00000099622.14	ENST00000588917.2	1087	3	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	122	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGTCTGTGGTTCAGGG	134	False	NA	18	True	AATAAA	-23	NA	1272924	1274810	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1273716_1274306_1274441_1274648
H1_mix_00042688	chr19	+	870	3	FSM	ENSG00000228300.14	ENST00000409293.6	870	3	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	91.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGCTGACCCCATGCC	-17	True	NA	24	True	AATAAA	-19	NA	1275529	1279228	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1275831_1277182_1277300_1278776
H1_mix_00042689	chr19	+	758	3	FSM	ENSG00000228300.14	ENST00000469144.5	668	3	-106	16	-106	0	multi-exon	FALSE	canonical	3	140	junction_1	129	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGCTGACCCCATGCC	168	False	NA	24	True	AATAAA	-19	NA	1275914	1279228	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1276104_1277182_1277300_1278776
H1_mix_00042691	chr19	+	2016	2	FSM	ENSG00000228300.14	ENST00000485191.5	1675	2	-749	408	-186	0	multi-exon	FALSE	canonical	3	398	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCCAGTGCCCAGCAACC	903	False	NA	NA	False	NA	NA	NA	1275343	1278836	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1277300_1278776
H1_mix_00042692	chr19	+	2421	4	FSM	ENSG00000099617.4	ENST00000215368.4	2424	4	3	0	3	0	multi-exon	FALSE	canonical	3	36	junction_1	2.16024689946929	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGTGTGTCTGTATGTGGG	-20	True	NA	NA	False	AATAAA	-19	NA	1285875	1301431	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1286309_1295544_1295859_1298550_1298617_1299823
H1_mix_00042693	chr19	+	1154	1	ISM	ENSG00000099617.4	ENST00000215368.4	2424	4	14405	0	14405	0	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGTGTGTCTGTATGTGGG	0	True	NA	NA	False	AATAAA	-19	NA	1300277	1301431	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_1300300_1301400
H1_mix_00042694	chr19	+	394	3	ISM	ENSG00000160953.17	ENST00000591337.7	4232	14	-5	21335	-5	0	5prime_fragment	FALSE	canonical	3	177	junction_1	122	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAAGTGTTGTGTTGTTTT	-30	True	NA	NA	False	AAGAAA	-43	NA	1354953	1357094	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_1355136_1356323_1356450_1357008
H1_mix_00042696	chr19	+	4256	14	FSM	ENSG00000160953.17	ENST00000591337.7	4232	14	-25	1	12	0	multi-exon	FALSE	canonical	3	177	junction_1	93.66539969803	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGCTTGTCTTTTCTGA	-50	True	NA	13	True	ATTAAA	-13	NA	1354933	1378428	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1355136_1356323_1356450_1357008_1357095_1358393_1358465_1360135_1361033_1362249_1362352_1364508_1364580_1366304_1366382_1367159_1367221_1369264_1369341_1369595_1369647_1370641_1371079_1373071_1373161_1376518
H1_mix_00042697	chr19	+	4106	14	NIC	ENSG00000160953.17	novel	4232	14	NA	NA	-3	0	intron_retention	FALSE	canonical	3	147	junction_1	100.004496940308	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGCTTGTCTTTTCTGA	-15	True	NA	13	True	ATTAAA	-13	NA	1354968	1378428	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_1355021_1356323_1356450_1357008_1357095_1358393_1358465_1360135_1361033_1362249_1362352_1364508_1364580_1366304_1366382_1367159_1367221_1369264_1369341_1369595_1369647_1370641_1371079_1373071_1373161_1376518
H1_mix_00042698	chr19	+	2603	12	FSM	ENSG00000160953.17	ENST00000591433.6	2603	12	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	162.117496417346	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGTGGATAATGCGCCT	480	False	NA	NA	False	GATAAA	-21	NA	1356289	1371479	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1356450_1357008_1357095_1358393_1358465_1358587_1358701_1360135_1361033_1362249_1362352_1364508_1364580_1366304_1366382_1367159_1367221_1369264_1369341_1369595_1369647_1370641
H1_mix_00042699	chr19	+	3545	14	NIC	ENSG00000160953.17	novel	2793	14	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_13	179.740246503163	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGCATCTGATATTAAAC	514	False	NA	17	True	NA	NA	NA	1356323	1376917	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_1356450_1357008_1357095_1358393_1358465_1358587_1358701_1360135_1361033_1362249_1362352_1364508_1364580_1366304_1366382_1367159_1367221_1369264_1369341_1369595_1369647_1370641_1371079_1373071_1374050_1376518
H1_mix_00042700	chr19	+	2793	14	FSM	ENSG00000160953.17	ENST00000587460.6	2793	14	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	150.276667926451	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGCCTTCGTTAGAGGC	17	False	NA	NA	False	NA	NA	NA	1356363	1377094	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1356450_1357008_1357095_1358393_1358465_1358587_1358701_1360135_1361033_1362249_1362352_1364508_1364580_1366304_1366382_1367159_1367221_1369264_1369341_1369595_1369647_1370641_1371079_1373071_1373161_1376518
H1_mix_00042702	chr19	+	1468	2	FSM	ENSG00000160953.17	ENST00000591627.5	1461	2	-7	0	-7	0	multi-exon	FALSE	canonical	3	437	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGCATCTGATATTAAAC	NA	False	NA	17	True	NA	NA	NA	1372091	1376917	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1373161_1376518
H1_mix_00042704	chr19	+	787	8	FSM	ENSG00000115286.21	ENST00000233627.14	758	8	-32	3	0	0	multi-exon	FALSE	canonical	3	964	junction_1	154.017359212446	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCCAGTGTGGTGTGTG	282	False	NA	25	True	AATAAA	-18	NA	1383874	1395581	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1383943_1387810_1387848_1388524_1388594_1388832_1388939_1390870_1391051_1391118_1391166_1393241_1393331_1395390
H1_mix_00042705	chr19	+	3089	6	FSM	ENSG00000115286.21	ENST00000545446.5	3089	6	0	0	0	0	multi-exon	FALSE	canonical	3	964	junction_1	176.751803385425	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCAGTGTGGTGTGTGGGT	282	False	NA	28	True	AATAAA	-21	NA	1383874	1395584	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1383943_1387810_1387848_1388524_1388939_1390870_1391051_1391118_1391166_1393241
H1_mix_00042706	chr19	+	2201	12	FSM	ENSG00000071626.17	ENST00000233078.9	2184	12	-17	0	0	0	multi-exon	FALSE	canonical	3	947	junction_4	76.8732992152113	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTTGTGTCCGTTTTTT	8	True	NA	31	True	AATAAA	-24	NA	1407568	1435684	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1407803_1417499_1417541_1418203_1418371_1418665_1418732_1421147_1421259_1422347_1422397_1425877_1425961_1428841_1428996_1429966_1429997_1430221_1430363_1432513_1432691_1434736
H1_mix_00042707	chr19	+	2290	13	FSM	ENSG00000071626.17	ENST00000336761.10	2290	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_12	398.705640165774	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTTGTGTCCGTTTTTT	8	True	NA	31	True	AATAAA	-24	NA	1407568	1435684	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1407803_1417499_1417541_1418203_1418371_1418665_1418732_1421147_1421259_1422347_1422397_1425877_1425961_1428841_1428996_1429966_1429997_1430221_1430363_1432513_1432691_1433738_1433828_1434736
H1_mix_00042708	chr19	+	2157	12	FSM	ENSG00000071626.17	ENST00000592522.5	2157	12	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_11	235.997093412554	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGTCCGTTTTTTCCC	52	False	NA	34	True	AATAAA	-27	NA	1407612	1435687	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1407803_1417499_1417541_1418203_1418371_1418665_1418732_1421147_1421259_1422347_1422397_1425877_1425961_1428841_1428996_1429966_1429997_1430221_1430363_1432513_1432691_1434739
H1_mix_00042709	chr19	+	2089	12	FSM	ENSG00000071626.17	ENST00000587079.5	2086	12	-3	0	0	0	multi-exon	FALSE	canonical	3	244	junction_4	253.84761486027	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACTTTGTGTCCGTTTTT	13	False	NA	30	True	AATAAA	-23	NA	1407676	1435683	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1407803_1417499_1417541_1418203_1418371_1418665_1418732_1421150_1421259_1422347_1422397_1425877_1425961_1428841_1428996_1429966_1429997_1430221_1430363_1432513_1432691_1434736
H1_mix_00042710	chr19	+	508	4	FSM	ENSG00000071626.17	ENST00000590419.5	508	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	549.288833149029	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACGGCCGAAGGAAGGAT	2050	False	NA	NA	False	NA	NA	NA	1409823	1418709	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1410080_1417499_1417541_1418203_1418371_1418665
H1_mix_00042711	chr19	+	3943	5	FSM	ENSG00000071626.17	ENST00000585485.2	3943	5	0	0	0	0	multi-exon	FALSE	canonical	3	1031	junction_2	49.5933463279098	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTTGTGTCCGTTTTTT	462	False	NA	31	True	AATAAA	-24	NA	1426348	1435684	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1428996_1429966_1429997_1430221_1430363_1432513_1432691_1434736
H1_mix_00042712	chr19	+	3642	1	FSM	ENSG00000071626.17	ENST00000589874.2	3642	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTTGTGTCCGTTTTTT	1789	False	NA	31	True	AATAAA	-24	NA	1432042	1435684	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1432000_1435700
H1_mix_00042713	chr19	+	556	4	FSM	ENSG00000115268.10	ENST00000233609.8	534	4	-22	0	-22	0	multi-exon	FALSE	canonical	3	466	junction_1	8254.55950773066	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	184	False	NA	29	True	AATAAA	-17	NA	1438335	1440494	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1438429_1438810_1438893_1440018_1440254_1440348
H1_mix_00042714	chr19	+	493	4	FSM	ENSG00000115268.10	ENST00000589656.6	473	4	-20	0	0	0	multi-exon	FALSE	canonical	3	495	junction_3	7625.78303447514	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCAGTCCTTTGCGCAGC	-13	True	NA	23	True	AATAAA	-11	NA	1438384	1440488	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1438429_1438806_1438893_1440018_1440242_1440348
H1_mix_00042715	chr19	+	565	4	FSM	ENSG00000115268.10	ENST00000591032.1	550	4	-15	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	7397.27739704879	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTCCTTTGCGCAGCTT	-13	True	NA	25	True	AATAAA	-13	NA	1438384	1440490	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1438429_1438806_1438893_1439960_1440254_1440348
H1_mix_00042716	chr19	+	652	4	FSM	ENSG00000115268.10	ENST00000593052.5	629	4	-23	0	0	0	multi-exon	FALSE	canonical	3	965	junction_1	8019.88263976198	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	-2	True	NA	29	True	AATAAA	-17	NA	1438395	1440494	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1438581_1438806_1438893_1440018_1440254_1440348
H1_mix_00042717	chr19	+	889	3	FSM	ENSG00000115268.10	ENST00000592623.5	873	3	-16	0	0	0	multi-exon	FALSE	canonical	3	17253	junction_2	683.5	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	-13	True	NA	29	True	AATAAA	-17	NA	1438384	1440494	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1438893_1440018_1440254_1440348
H1_mix_00042718	chr19	+	732	5	FSM	ENSG00000115268.10	ENST00000591804.6	711	5	-21	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	7788.01978602392	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	-13	True	NA	29	True	AATAAA	-17	NA	1438384	1440494	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1438429_1438806_1438893_1439605_1439827_1440018_1440254_1440348
H1_mix_00042719	chr19	+	855	4	FSM	ENSG00000115268.10	ENST00000592588.7	501	4	-11	-343	0	343	multi-exon	FALSE	canonical	3	13469	junction_1	2178.68834138545	1538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCCCCTCAAGCCCTCAC	-13	True	NA	NA	False	NA	NA	NA	1438384	1440838	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1438429_1438806_1438893_1440018_1440254_1440348
H1_mix_00042721	chr19	+	470	4	FSM	ENSG00000115268.10	ENST00000585665.2	467	4	-3	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	7371.46287305911	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	21	False	NA	29	True	AATAAA	-17	NA	1438418	1440494	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1438429_1438806_1438893_1440025_1440254_1440348
H1_mix_00042723	chr19	+	1375	5	FSM	ENSG00000115255.12	ENST00000233596.8	1360	5	-15	0	0	0	multi-exon	FALSE	canonical	3	301	junction_4	32.4220218370169	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGCCACGTGTGCGG	-19	True	NA	16	True	AATAAA	-17	NA	1491165	1497927	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1491385_1495293_1495388_1495468_1495608_1496284_1496454_1497173
H1_mix_00042724	chr19	+	457	2	FSM	ENSG00000267092.2	ENST00000590252.2	457	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGTGTGGTGTCTCATG	381	False	NA	NA	False	AAAAAG	-1	NA	1508374	1508963	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1508762_1508893
H1_mix_00042725	chr19	+	2763	1	FSM	ENSG00000267244.5	ENST00000590823.2	2397	1	-128	-238	-71	238	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTTATGTATTTATCTT	NA	False	NA	NA	False	AAGAAA	-24	NA	1822017	1824780	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1822000_1824800
H1_mix_00042727	chr19	+	1451	2	NNC	ENSG00000213638.6	novel	1599	2	NA	NA	-43	0	at_least_one_novel_splicesite	TRUE	canonical	3	23	junction_1	0	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTGTCTGTTAGGAGGT	351	False	NA	8	True	AATAAA	-15	NA	1905355	1913447	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_1905440_1912080
H1_mix_00042728	chr19	+	2536	7	FSM	ENSG00000227500.10	ENST00000316097.13	2501	7	-43	8	-16	0	multi-exon	FALSE	canonical	3	229	junction_5	30.4617246174058	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTAGAGCCAGGGACCTG	351	False	NA	25	True	AATAAA	-13	NA	1905355	1926005	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1905440_1914978_1915027_1917693_1917823_1918126_1918284_1918888_1918991_1923069_1923188_1924107
H1_mix_00042729	chr19	+	2787	9	NNC	ENSG00000227500.10	novel	2501	7	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_5	127.018699410756	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGGGACCTGCCGCGTT	359	False	NA	32	True	AATAAA	-20	NA	1905363	1926012	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_1905440_1914978_1915027_1917693_1917823_1918126_1918284_1918888_1918991_1920647_1920852_1920961_1921010_1923069_1923188_1924107
H1_mix_00042730	chr19	+	573	6	FSM	ENSG00000227500.10	ENST00000489554.1	573	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	107.867325914755	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGCCTCCTGTGAGCCG	9	True	NA	NA	False	NA	NA	NA	1905398	1920743	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1905440_1914978_1915027_1917693_1917823_1918126_1918284_1918888_1918991_1920647
H1_mix_00042731	chr19	+	2399	6	FSM	ENSG00000227500.10	ENST00000409472.5	2394	6	-5	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	110.97387079849	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGGACCTGCCGCGTTT	9	True	NA	33	True	AATAAA	-21	NA	1905398	1926013	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1905440_1914978_1915027_1917693_1917823_1918126_1918284_1923069_1923188_1924107
H1_mix_00042732	chr19	+	4387	8	NNC	ENSG00000227500.10	novel	2501	7	NA	NA	7	-3	intron_retention	FALSE	canonical	3	11	junction_6	117.603449900806	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCACTTAGAGCCAGGGAC	21	True	NA	22	True	AATAAA	-10	NA	1905410	1926002	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_1905440_1914978_1915027_1917693_1917823_1918126_1918284_1918888_1920852_1920961_1921010_1923069_1923188_1924107
H1_mix_00042733	chr19	+	4148	2	FSM	ENSG00000227500.10	ENST00000472442.2	2973	2	-1167	-8	-1167	0	multi-exon	FALSE	canonical	3	288	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGGACCTGCCGCGTTT	NA	False	NA	33	True	AATAAA	-21	NA	1920945	1926013	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1923188_1924107
H1_mix_00042734	chr19	+	2895	12	FSM	ENSG00000133275.16	ENST00000255641.13	2895	12	0	0	0	0	multi-exon	TRUE	canonical	3	675	junction_2	49.2238939493534	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGTGTAGAGGGATTTG	12	True	NA	NA	False	AATAAA	-18	NA	1941171	1981338	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1941419_1969507_1969960_1978304_1978346_1978441_1978512_1978601_1978751_1978858_1979094_1979162_1979249_1979318_1979404_1979494_1979644_1979751_1979836_1979910_1980018_1980148
H1_mix_00042735	chr19	+	964	6	FSM	ENSG00000133275.16	ENST00000615564.1	964	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	311.099083894505	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGTGGAGCTGTCTTGC	NA	False	NA	49	True	NA	NA	NA	1979203	1980667	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1979249_1979318_1979404_1979494_1979619_1979751_1979836_1979910_1980018_1980148
H1_mix_00042736	chr19	+	895	9	FSM	ENSG00000099840.14	ENST00000395307.6	944	9	0	49	0	-49	multi-exon	FALSE	canonical	0	0	junction_6	3.21859829739593	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGCAGGTCCGCAGAGC	-16	True	NA	-41	True	NA	NA	NA	2096881	2099531	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2097163_2097251_2097333_2097423_2097496_2097928_2097956_2098051_2098128_2098286_2098335_2098435_2098451_2098786_2098805_2099254
H1_mix_00042737	chr19	+	870	8	FSM	ENSG00000099840.14	ENST00000395296.5	869	8	-2	1	-2	-1	multi-exon	FALSE	canonical	0	0	junction_6	3.06394436993246	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCAGAAGAGTTCTTGT	-4	True	NA	11	True	ATTAAA	-16	NA	2096940	2099583	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2097163_2097251_2097333_2097423_2097496_2097928_2097956_2098051_2098128_2098286_2098335_2098435_2098451_2099254
H1_mix_00042738	chr19	+	5181	28	FSM	ENSG00000104885.19	ENST00000686010.1	5469	28	6	282	6	-282	multi-exon	FALSE	canonical	3	19	junction_3	17.2247310000676	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCGCGTCCCTCCCGCC	-4	True	NA	NA	False	NA	NA	NA	2163938	2228065	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2164266_2180712_2180757_2185854_2185930_2189731_2189796_2191011_2191241_2193688_2193784_2194514_2194578_2199883_2199940_2202699_2202780_2206728_2206798_2207573_2207681_2208934_2208977_2210399_2210511_2210620_2210856_2211098_2211213_2211750_2211843_2213538_2213641_2213848_2213987_2214470_2214597_2216280_2216766_2216954_2217091_2217771_2217919_2220107_2220223_2221975_2222560_2223280_2223487_2225387_2225453_2226182_2227128_2227736
H1_mix_00042739	chr19	+	7652	28	FSM	ENSG00000104885.19	ENST00000398665.8	7652	28	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	17.1128746886588	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGTGAATGGCAGCCT	-10	True	NA	28	True	AATAAA	-20	NA	2163932	2232578	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2164266_2180712_2180757_2185854_2185930_2189731_2189796_2191011_2191241_2193688_2193784_2194514_2194578_2199883_2199940_2202699_2202780_2206728_2206798_2207573_2207681_2208934_2208977_2210399_2210511_2210620_2210856_2211098_2211213_2211750_2211843_2213538_2213641_2213848_2213987_2214470_2214597_2216280_2216766_2216954_2217091_2217771_2217919_2220107_2220223_2221975_2222560_2223280_2223487_2225387_2225453_2226182_2227128_2229784
H1_mix_00042740	chr19	+	997	8	FSM	ENSG00000104897.10	ENST00000592314.5	885	8	-112	0	-76	0	multi-exon	FALSE	canonical	3	739	junction_1	76.4786217961381	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGCCACCGCTGCCTGAG	228	False	NA	NA	False	NA	NA	NA	2236747	2247878	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2236902_2243381_2243545_2244543_2244616_2244732_2244780_2245445_2245556_2246752_2247023_2247593_2247663_2247766
H1_mix_00042741	chr19	+	1619	9	FSM	ENSG00000104897.10	ENST00000221494.10	1619	9	0	0	0	0	multi-exon	FALSE	canonical	3	739	junction_1	72.6428549480264	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGAGTGCACTGATGTC	-15	True	NA	24	True	ATTAAA	-13	NA	2236823	2248655	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2236902_2243381_2243545_2244543_2244616_2244732_2244780_2245445_2245556_2246752_2246803_2246881_2247023_2247593_2247663_2247766
H1_mix_00042742	chr19	+	724	5	FSM	ENSG00000104897.10	ENST00000592839.6	724	5	0	0	0	0	multi-exon	FALSE	canonical	3	739	junction_1	90.7837402842601	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAAAAGAGTGGAAGTGG	14	True	NA	NA	False	NA	NA	NA	2236852	2245838	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2236902_2243381_2243545_2244543_2244616_2244732_2244780_2245445
H1_mix_00042744	chr19	+	4781	10	Fusion	ENSG00000104897.10_ENSG00000104899.8	novel	1619	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	60	junction_8	339.78253757294	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGTGTCCGTGCGTGTTA	6543	False	NA	12	True	AATAAA	-19	NA	2243381	2252073	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_+_2243545_2244543_2244616_2244732_2244780_2245445_2245556_2246752_2246803_2246881_2247023_2247593_2247663_2247766_2250761_2250848_2251009_2251098
H1_mix_00042745	chr19	+	2107	3	FSM	ENSG00000104899.8	ENST00000589313.2	1686	3	-421	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	9.5	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGGGTCGGGCACAGCGC	0	True	NA	NA	False	NA	NA	NA	2249322	2251607	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2250761_2250848_2251009_2251098
H1_mix_00042746	chr19	+	1808	5	FSM	ENSG00000104899.8	ENST00000221496.5	1809	5	0	1	0	-1	multi-exon	FALSE	canonical	1	1	junction_1	32.8519405819504	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGTGTCCGTGCGTGTT	0	True	NA	11	True	AATAAA	-18	NA	2249322	2252072	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2249745_2250336_2250480_2250651_2250761_2250848_2251009_2251098
H1_mix_00042747	chr19	+	857	3	FSM	ENSG00000104904.12	ENST00000592787.2	857	3	0	0	0	0	multi-exon	FALSE	canonical	3	7097	junction_2	290	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGATTCTCCTGCCTCAGCC	NA	False	NA	NA	False	NA	NA	NA	2269514	2272262	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2269745_2271384_2271531_2271781
H1_mix_00042748	chr19	+	1524	4	FSM	ENSG00000104904.12	ENST00000588673.3	780	4	-776	32	0	0	multi-exon	FALSE	canonical	3	412	junction_1	3273.21252322886	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCATGTCTTCATTTGCTT	NA	False	NA	NA	False	NA	NA	NA	2269514	2272777	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2270677_2271384_2271531_2271781_2271955_2272734
H1_mix_00042749	chr19	+	1136	4	FSM	ENSG00000104904.12	ENST00000581150.6	1131	4	-5	0	0	0	multi-exon	FALSE	canonical	3	7210	junction_3	202.455482075004	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAACGCTCACTCCGAA	NA	False	NA	8	True	NA	NA	NA	2269514	2273221	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2269745_2271384_2271955_2272734_2272821_2272971
H1_mix_00042750	chr19	+	989	5	NIC	ENSG00000104904.12	novel	969	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	100	junction_1	3122.2686763794	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCTGGTTTAAGATGAT	NA	False	NA	33	True	AATAAA	-20	NA	2269514	2273331	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_2269745_2271390_2271531_2271781_2271955_2272734_2272821_2272971
H1_mix_00042751	chr19	+	1006	4	FSM	ENSG00000104904.12	ENST00000590943.6	1012	4	6	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	3437.6473867393	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACCTGGCTCTGTGGTGG	NA	False	NA	119	True	AATAAA	-15	NA	2269514	2273488	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2269745_2271781_2271955_2272734_2272821_2272971
H1_mix_00042752	chr19	+	1154	5	NIC	ENSG00000104904.12	novel	1148	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	7097	junction_2	244.839743505829	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGGCTCTGTGGTGGTG	NA	False	NA	121	True	AATAAA	-17	NA	2269514	2273490	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_2269745_2271384_2271531_2271781_2271955_2272734_2272821_2272971
H1_mix_00042753	chr19	+	2832	1	FSM	ENSG00000104904.12	ENST00000586054.2	2832	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACCTGGCTCTGTGGTGG	362	False	NA	119	True	AATAAA	-15	NA	2270656	2273488	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2270700_2273500
H1_mix_00042756	chr19	+	2471	8	FSM	ENSG00000005206.17	ENST00000618220.4	2459	8	-12	0	0	0	multi-exon	FALSE	canonical	3	136	junction_3	33.7088373321554	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCTGGCATTGTGGTGT	-3	True	NA	NA	False	AATACA	-7	NA	2328683	2342503	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2328776_2334601_2334722_2337442_2337626_2338751_2338842_2339068_2339209_2339823_2339967_2340075_2340173_2340897
H1_mix_00042757	chr19	+	2592	15	FSM	ENSG00000005206.17	ENST00000610743.4	2583	15	-9	0	0	0	multi-exon	FALSE	canonical	3	51	junction_14	65.0480199388051	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGCTGGTGCCACCTGG	-3	True	NA	30	True	AATAAA	-19	NA	2328683	2353933	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2328776_2334601_2334722_2337442_2337626_2338751_2338842_2339068_2339209_2339823_2339967_2340075_2340173_2340897_2341015_2343210_2343293_2343964_2344040_2344361_2344425_2344552_2344653_2345252_2345331_2351433_2351658_2352945
H1_mix_00042758	chr19	+	3416	15	FSM	ENSG00000005206.17	ENST00000613503.5	3691	15	0	275	0	-275	multi-exon	FALSE	canonical	3	136	junction_3	50.813635081581	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGCAGTGCACGGCTTGGG	-3	True	NA	35	True	ATTAAA	-35	NA	2328683	2354820	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2328776_2334601_2334722_2337442_2337626_2338751_2338842_2339068_2339209_2339823_2339967_2340075_2340173_2340897_2341015_2343210_2343293_2343964_2344040_2344361_2344425_2344552_2344653_2345252_2345331_2351433_2351595_2352945
H1_mix_00042760	chr19	+	1411	3	FSM	ENSG00000005206.17	ENST00000614784.1	1411	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	92.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGGCCGCAGTTCTCTG	7044	False	NA	NA	False	TATAAA	-12	NA	2339677	2341956	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2339967_2340075_2340173_2340931
H1_mix_00042761	chr19	+	1954	5	ISM	ENSG00000005206.17	ENST00000589515.2	1733	7	293	6877	293	2718	5prime_fragment	FALSE	canonical	3	252	junction_3	14.9164338901763	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAAAAACACAGCTG	2009	False	NA	-9	True	AATAAA	-8	NA	2343014	2346690	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_2343293_2343964_2344040_2344361_2344425_2344552_2344653_2345252
H1_mix_00042762	chr19	+	1373	4	FSM	ENSG00000099860.9	ENST00000215631.9	1371	4	-2	0	-2	0	multi-exon	FALSE	canonical	3	37	junction_3	2.05480466765633	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGCTTGTATGTTTTCG	-2	True	NA	26	True	AATAAA	-14	NA	2476124	2478257	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2476403_2476528_2476631_2477028_2477252_2477487
H1_mix_00042763	chr19	+	4771	13	FSM	ENSG00000172009.15	ENST00000307741.11	4761	13	-16	6	-16	-6	multi-exon	FALSE	canonical	3	495	junction_8	57.0600925925175	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACATATATTGGAACCTG	-29	True	NA	NA	False	AATAAA	-12	NA	2785486	2815801	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2785679_2790420_2790634_2794763_2794913_2796080_2796189_2799688_2799792_2805015_2805177_2806916_2807053_2807441_2807809_2808242_2808445_2810303_2810491_2810639_2810769_2811597_2811735_2813114
H1_mix_00042765	chr19	+	4937	6	FSM	ENSG00000172009.15	ENST00000589087.5	2977	6	248	-2208	248	0	multi-exon	FALSE	canonical	3	519	junction_2	62.9679283445152	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGGAACCTGTATGTT	4178	False	NA	NA	False	AATAAA	-18	NA	2806264	2815807	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2807053_2807441_2808445_2810303_2810491_2810639_2810769_2811597_2811735_2813114
H1_mix_00042766	chr19	+	3312	5	FSM	ENSG00000172009.15	ENST00000590970.5	1104	5	0	-2208	0	0	multi-exon	FALSE	canonical	3	20	junction_3	267.544739249345	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGGAACCTGTATGTT	6156	False	NA	NA	False	AATAAA	-18	NA	2808242	2815807	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2808445_2810303_2810491_2810639_2810769_2811633_2811735_2813114
H1_mix_00042769	chr19	+	3615	5	FSM	ENSG00000172006.12	ENST00000317243.10	3704	5	32	57	-19	-57	multi-exon	FALSE	canonical	3	39	junction_3	5.19615242270663	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAATACAAATCAAATAGCA	25	False	NA	NA	False	NA	NA	NA	2819899	2836678	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2820125_2823039_2823113_2827616_2827744_2832302_2832495_2833680
H1_mix_00042770	chr19	+	2255	4	FSM	ENSG00000186300.12	ENST00000591539.1	2270	4	15	0	15	0	multi-exon	FALSE	canonical	3	5	junction_3	10.3708994574027	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATTGGATATTACGTATC	NA	False	NA	112	True	NA	NA	NA	2841458	2854209	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2841576_2850586_2850714_2851467_2851652_2852382
H1_mix_00042771	chr19	+	8198	4	FSM	ENSG00000186300.12	ENST00000334241.9	8504	4	-5	311	-5	-311	multi-exon	FALSE	canonical	3	17	junction_3	4.71404520791032	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTCTTGAGTGTGCTTG	-7	True	NA	NA	False	NA	NA	NA	2841469	2860160	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2841576_2850586_2850714_2851467_2851652_2852379
H1_mix_00042772	chr19	+	1970	4	FSM	ENSG00000171970.14	ENST00000306908.10	1970	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	8.01387685344754	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTCTCTAAGTCCTCTTT	-24	True	NA	NA	False	AATAAA	-17	NA	2900927	2918473	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2901049_2915521_2915649_2916077_2916250_2916923
H1_mix_00042773	chr19	+	1610	1	FSM	ENSG00000279452.1	ENST00000624348.1	1610	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCACAGACGGATGCTTCC	NA	False	NA	NA	False	NA	NA	NA	2949034	2950644	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2949000_2950600
H1_mix_00042775	chr19	+	2024	17	FSM	ENSG00000104953.20	ENST00000246112.9	1977	17	-47	0	-21	0	multi-exon	TRUE	canonical	3	16	junction_1	9.36895638531848	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTGGACGCGTCCTGTC	NA	False	NA	8	True	AATAAA	-17	NA	2977516	2995179	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2977611_2978197_2978285_2980099_2980183_2981537_2981584_2982147_2982190_2986828_2986892_2986982_2987239_2987355_2987373_2987723_2987791_2987897_2987975_2988090_2988129_2989060_2989314_2989534_2989786_2991842_2991985_2993431_2993583_2994018_2994096_2994899
H1_mix_00042777	chr19	+	1700	7	ISM	ENSG00000104953.20	ENST00000497878.5	1559	8	172	-28	172	0	3prime_fragment	FALSE	canonical	3	27	junction_1	7.05730511991338	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTGGACGCGTCCTGTC	5427	False	NA	8	True	AATAAA	-17	NA	2987582	2995179	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_2988129_2989060_2989314_2989534_2989786_2991842_2991985_2993431_2993583_2994018_2994096_2994899
H1_mix_00042778	chr19	+	4203	7	FSM	ENSG00000088256.9	ENST00000078429.9	4190	7	-13	0	-13	0	multi-exon	FALSE	canonical	3	53	junction_4	8.13941029804985	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGCGGCCCCCTTCTGG	-25	True	NA	14	True	AATAAA	-14	NA	3094348	3123999	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_3094788_3110148_3110334_3113329_3113485_3114943_3115073_3118923_3119054_3119205_3119360_3120988
H1_mix_00042779	chr19	+	3673	15	NIC	ENSG00000125912.11	novel	3680	15	NA	NA	0	0	intron_retention	TRUE	canonical	3	337	junction_11	91.3730020859777	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACCAGTGTTTGGTCTGG	-9	True	NA	31	True	AATAAA	-17	NA	3185929	3209571	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_3186215_3192469_3192661_3193283_3193429_3196182_3196278_3198816_3198898_3201522_3201627_3203755_3203845_3204004_3204145_3204572_3204752_3205938_3206027_3206151_3206191_3206264_3206426_3207197_3207252_3207390_3207470_3207628
H1_mix_00042780	chr19	+	3680	15	FSM	ENSG00000125912.11	ENST00000246117.9	3680	15	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_11	88.3583843312713	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGTTTGGTCTGGGGGC	-9	True	NA	35	True	AATAAA	-21	NA	3185929	3209575	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_3186215_3192469_3192661_3193283_3193429_3196182_3196278_3198816_3198898_3201522_3201627_3203755_3203845_3204004_3204145_3204572_3204752_3205938_3206027_3206151_3206191_3206261_3206426_3207197_3207252_3207390_3207470_3207628
H1_mix_00042781	chr19	+	2949	9	FSM	ENSG00000125912.11	ENST00000592737.5	2735	9	-187	-27	-187	27	multi-exon	FALSE	canonical	3	337	junction_5	115.363488049729	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGATTGTGACAACTGTT	2166	False	NA	62	True	GGGGCT	-7	NA	3203609	3209602	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_3203845_3204004_3204145_3204572_3204752_3205938_3206027_3206151_3206191_3206264_3206426_3207197_3207252_3207390_3207470_3207628
H1_mix_00042782	chr19	+	1913	13	FSM	ENSG00000161082.13	ENST00000292672.7	1896	13	-17	0	-17	0	multi-exon	TRUE	canonical	2	11	junction_10	3.83242742918897	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGACTCTTCTCTTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	3224643	3297076	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_3224999_3250984_3251068_3273871_3273924_3275855_3275985_3278030_3278111_3281198_3281346_3282125_3282268_3282351_3282499_3284901_3284965_3285941_3286026_3290230_3290375_3293318_3293487_3296757
H1_mix_00042783	chr19	+	3115	11	FSM	ENSG00000161082.13	ENST00000588350.1	3115	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_8	4.20119030752	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGACTCTTCTCTTTCT	3301	False	NA	NA	False	AATAAA	-17	NA	3273904	3297076	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_3273924_3275855_3275985_3278030_3278111_3281198_3281346_3282125_3282268_3282351_3282499_3284901_3284965_3285941_3286026_3290271_3290375_3293318_3293487_3295043
H1_mix_00042784	chr19	+	5178	14	FSM	ENSG00000105325.15	ENST00000441788.7	5178	14	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_10	21.1824980786514	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGCGTTCAGTACCTTCA	2	True	NA	19	True	AATACA	-22	NA	3506310	3538334	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_3506475_3522955_3523059_3525867_3525994_3526119_3526184_3526258_3526387_3526979_3527063_3527630_3527815_3530791_3530858_3531713_3531817_3531910_3532096_3532416_3532651_3533293_3533399_3534420_3534514_3534794
H1_mix_00042785	chr19	+	675	5	FSM	ENSG00000105325.15	ENST00000588327.1	675	5	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_1	16.6939360247965	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGGGTCCCAGCTTCCTC	14	False	NA	NA	False	NA	NA	NA	3506376	3527060	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_3506475_3522955_3523059_3525867_3525994_3526119_3526387_3526979
H1_mix_00042787	chr19	+	718	3	FSM	ENSG00000064961.19	ENST00000470356.3	806	3	88	0	-33	0	multi-exon	FALSE	canonical	3	577	junction_1	134.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTAGGCCCCGCCCCCATC	-4	True	NA	NA	False	NA	NA	NA	3572910	3574269	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_3572995_3573291_3573348_3573691
H1_mix_00042788	chr19	+	1585	10	FSM	ENSG00000064961.19	ENST00000333651.11	1585	10	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_1	100.443215331713	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTGAGTGTGTAAGCTT	-28	True	NA	22	True	AATAAA	-24	NA	3572943	3579083	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_3572995_3573291_3573348_3573691_3573801_3574382_3574587_3575539_3575661_3576260_3576308_3576552_3576626_3576891_3577108_3577980_3578114_3578508
H1_mix_00042789	chr19	+	2433	8	FSM	ENSG00000064961.19	ENST00000488973.6	2434	8	-2	3	0	2	multi-exon	FALSE	canonical	3	827	junction_6	32.4961536185438	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAGTGTGTAAGCTTGT	5	True	NA	24	True	AATAAA	-26	NA	3572976	3579085	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_3573348_3573691_3574587_3575539_3575661_3576260_3576308_3576552_3576626_3576891_3577108_3577980_3578114_3578508
H1_mix_00042790	chr19	+	1846	9	NIC	ENSG00000064961.19	novel	1585	10	NA	NA	1	-2	intron_retention	FALSE	canonical	3	804	junction_2	40.0825320432729	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTGTGAGTGTGTAAGC	6	True	NA	20	True	AATAAA	-22	NA	3572977	3579081	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_3573348_3573691_3573801_3574382_3574587_3575539_3575661_3576260_3576308_3576552_3576626_3576891_3577108_3577980_3578114_3578508
H1_mix_00042793	chr19	+	2784	1	ISM	ENSG00000179855.9	ENST00000644452.3	4410	6	5276	4	5156	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGCCTGGTGTGTCATTT	5117	False	NA	3	True	AATAAA	-16	NA	3590753	3593537	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_3590800_3593500
H1_mix_00042794	chr19	+	3095	21	FSM	ENSG00000105289.15	ENST00000541714.7	3076	21	-19	0	3	0	multi-exon	FALSE	canonical	3	5	junction_1	40.9445967131196	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCTTCTAGTGGCTTCCA	6	True	NA	9	True	AATAAA	-19	NA	3708364	3750813	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_3708562_3728423_3728481_3728603_3728714_3730027_3730131_3730354_3730707_3731934_3732039_3733752_3733913_3734326_3734436_3735565_3735640_3735868_3735936_3736164_3736322_3738554_3738664_3738896_3739135_3740551_3740764_3743938_3744035_3746010_3746082_3746484_3746696_3746775_3746877_3747793_3748082_3750137_3750185_3750581
H1_mix_00042795	chr19	+	571	4	FSM	ENSG00000105289.15	ENST00000587912.1	721	4	80	70	-40	-70	multi-exon	FALSE	canonical	0	0	junction_1	88.9756521002609	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCATCTTCTCATCTTAC	NA	False	NA	NA	False	NA	NA	NA	3721696	3730217	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_3721911_3728423_3728481_3728603_3728714_3730027
H1_mix_00042796	chr19	+	3068	21	FSM	ENSG00000105289.15	ENST00000589378.5	3068	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	41.9171504279573	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACCGGCTTCTAGTGGCT	3	True	NA	5	True	AATAAA	-15	NA	3721736	3750809	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_3721911_3728423_3728481_3728603_3728714_3730027_3730131_3730354_3730707_3731934_3732039_3733752_3733913_3734326_3734436_3735565_3735640_3735868_3735936_3736164_3736322_3738554_3738664_3738896_3739135_3740551_3740764_3743938_3744035_3746010_3746082_3746484_3746696_3746775_3746877_3747793_3748082_3750137_3750185_3750581
H1_mix_00042797	chr19	+	856	5	FSM	ENSG00000105289.15	ENST00000591493.1	856	5	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_3	8.92678553567856	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGACGGCGAGGGCGGCG	NA	False	NA	NA	False	NA	NA	NA	3743662	3747894	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_3744035_3746010_3746082_3746484_3746696_3746775_3746877_3747793
H1_mix_00042798	chr19	+	608	3	FSM	ENSG00000183617.5	ENST00000330133.5	608	3	0	0	0	0	multi-exon	FALSE	canonical	3	435	junction_2	5.5	147	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCCCTTGGTATTGTCTG	12	True	NA	28	True	AATAAA	-22	NA	3762681	3767565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_3762819_3765165_3765332_3767260
H1_mix_00042799	chr19	+	4971	13	FSM	ENSG00000167654.18	ENST00000450849.7	4971	13	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	8.50939023797958	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGGTTTGTTCCTTTTGA	14	True	NA	18	True	AATAAA	-18	NA	3880684	3928082	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_3881009_3885726_3885845_3902486_3902546_3905433_3905656_3907733_3907920_3908267_3908371_3909485_3909618_3910802_3910890_3913757_3913857_3917741_3917778_3918805_3918878_3920765_3920799_3924582
H1_mix_00042800	chr19	+	948	7	NNC	ENSG00000077009.14	novel	1160	8	NA	NA	-12	-33	intron_retention	FALSE	canonical	2	14	junction_1	421.626480298485	566	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGAGCTCAGGGACTGAGCC	8162	False	NA	-68	True	NA	NA	NA	3933056	3942336	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_3933175_3933490_3933698_3936574_3936666_3937239_3937289_3938602_3938760_3939899_3939972_3942082
H1_mix_00042801	chr19	+	1098	7	NIC	ENSG00000077009.14	novel	1160	8	NA	NA	-12	0	intron_retention	FALSE	canonical	3	16	junction_1	436.464488818965	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTTGGTGTCTACCGTG	8162	False	NA	10	True	AGTAAA	-18	NA	3933056	3942414	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_3933179_3933457_3933698_3936574_3936666_3937239_3937289_3938602_3938760_3941070_3941178_3942082
H1_mix_00042802	chr19	+	867	6	NNC	ENSG00000077009.14	novel	1160	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	28	junction_1	481.581394989466	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACCTCGCTGCAGCTTCA	6	True	NA	-35	True	NA	NA	NA	3933102	3942369	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_3933179_3933490_3933698_3936574_3936666_3937239_3937289_3938602_3938760_3942082
H1_mix_00042803	chr19	+	1139	8	FSM	ENSG00000077009.14	ENST00000616156.4	1139	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	393.570417421569	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTTGGTGTCTACCGTG	6	True	NA	10	True	AGTAAA	-18	NA	3933102	3942414	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_3933179_3933457_3933698_3936574_3936666_3937224_3937289_3938602_3938760_3939899_3939972_3941070_3941178_3942082
H1_mix_00042804	chr19	+	1180	8	FSM	ENSG00000077009.14	ENST00000168977.7	1160	8	-67	47	-67	0	multi-exon	FALSE	canonical	3	16	junction_1	338.675029357353	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACCTCGCTGCAGCTTCA	8107	False	NA	-35	True	NA	NA	NA	3933001	3942369	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_3933179_3933457_3933698_3936574_3936666_3937239_3937289_3938602_3938760_3939899_3939972_3941070_3941178_3942082
H1_mix_00042805	chr19	+	975	5	NIC	ENSG00000077009.14	novel	1160	8	NA	NA	236	0	intron_retention	FALSE	canonical	3	76	junction_4	415.483077272709	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTTGGTGTCTACCGTG	255	False	NA	10	True	AGTAAA	-18	NA	3933351	3942414	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_3933698_3936574_3936666_3937239_3937289_3938602_3938760_3942082
H1_mix_00042806	chr19	+	1129	7	ISM	ENSG00000077009.14	ENST00000168977.7	1160	8	308	2	-230	0	3prime_fragment	FALSE	canonical	3	625	junction_5	175.169124625952	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTTGGTGTCTACCGTG	280	False	NA	10	True	AGTAAA	-18	NA	3933376	3942414	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_3933698_3936574_3936666_3937239_3937289_3938602_3938760_3939899_3939972_3941070_3941178_3942082
H1_mix_00042807	chr19	+	747	6	NIC	ENSG00000077009.14	novel	869	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	195	junction_5	326.091643560518	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACCTCGCTGCAGCTTCA	18	False	NA	-35	True	NA	NA	NA	3933606	3942369	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_3933698_3936574_3936666_3937239_3937289_3938602_3938760_3939899_3939972_3942082
H1_mix_00042808	chr19	+	3071	11	FSM	ENSG00000105229.7	ENST00000262971.3	3069	11	-2	0	-2	0	multi-exon	FALSE	canonical	3	132	junction_4	10.5304320899002	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGGCGTCCGCTTTTCTG	-5	True	NA	30	True	AATAAA	-20	NA	4007733	4039386	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4007788_4012922_4013350_4024035_4024121_4028145_4028188_4028509_4028601_4028719_4028849_4028930_4029037_4033099_4033174_4033419_4033581_4037373_4037505_4037615
H1_mix_00042809	chr19	+	2524	16	FSM	ENSG00000089847.13	ENST00000597689.5	2524	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	14.9924425406047	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGGCCGCGGAACTGGGCC	143	False	NA	NA	False	NA	NA	NA	4186420	4217766	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4186462_4199874_4200006_4200082_4200172_4202025_4202091_4202868_4202927_4207241_4207313_4207500_4207608_4207780_4207969_4208763_4208802_4210057_4210139_4210264_4210373_4212474_4212514_4212599_4212699_4215977_4216051_4216283_4216403_4216549
H1_mix_00042811	chr19	+	4027	20	ISM	ENSG00000089847.13	ENST00000600132.5	4026	22	16016	0	959	0	3prime_fragment	FALSE	canonical	0	0	junction_1	24.9694550242997	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAACGCGTGCCGTCTCGTT	869	False	NA	23	True	AATAAA	-19	NA	4199369	4224814	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_4199770_4199874_4200006_4200082_4200172_4202025_4202091_4202868_4202927_4207241_4207313_4207500_4207608_4207780_4207969_4208763_4208802_4210057_4210139_4210264_4210373_4212474_4212514_4212599_4212699_4215977_4216051_4216283_4216403_4216549_4218164_4219590_4219759_4222669_4222796_4224126_4224193_4224427
H1_mix_00042813	chr19	+	1206	5	FSM	ENSG00000105246.6	ENST00000221847.6	1158	5	-48	0	-48	0	multi-exon	FALSE	canonical	1	4	junction_1	1.22474487139159	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCAGGTGTGATGTTGC	109	False	NA	5	True	AATAAA	-1	NA	4229474	4237528	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4229618_4231190_4231324_4233128_4233308_4234666_4234825_4236935
H1_mix_00042814	chr19	+	1431	8	FSM	ENSG00000105248.16	ENST00000262962.12	1431	8	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_4	24.9423825842599	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCCTGGGCCCCTTCTCTC	-18	True	NA	23	True	AATAAA	-15	NA	4247079	4269088	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4247171_4249227_4249329_4251026_4251172_4254354_4254490_4258241_4258424_4261993_4262115_4267623_4267775_4268583
H1_mix_00042815	chr19	+	1910	6	FSM	ENSG00000105251.11	ENST00000543264.7	1910	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	6.1773780845922	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTAGTGTCCTTTCTGG	0	True	NA	17	True	AATAAA	-13	NA	4279265	4290722	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4280361_4282869_4282976_4283053_4283243_4284780_4284905_4288242_4288363_4290446
H1_mix_00042816	chr19	+	1854	13	FSM	ENSG00000105255.11	ENST00000221856.11	1833	13	-21	0	-21	0	multi-exon	FALSE	canonical	3	422	junction_8	30.1602203057088	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCGAGGCCGCGGTGCTG	NA	False	NA	15	True	AATAAA	-15	NA	4304576	4323836	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4304762_4305945_4306042_4306197_4306330_4307881_4307984_4310272_4310296_4310474_4310597_4311841_4312052_4317181_4317281_4318345_4318506_4318871_4318952_4322985_4323238_4323347_4323437_4323532
H1_mix_00042817	chr19	+	696	6	FSM	ENSG00000105255.11	ENST00000601815.5	696	6	0	0	0	0	multi-exon	FALSE	canonical	3	446	junction_4	24.5650157744708	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTCATGGAGCCCCGCCC	7	False	NA	NA	False	NA	NA	NA	4304699	4310755	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4304762_4305945_4306042_4306197_4306330_4307881_4307984_4310272_4310296_4310474
H1_mix_00042818	chr19	+	1570	7	FSM	ENSG00000105255.11	ENST00000598179.1	1570	7	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_2	30.9645855059543	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCGCGGTGCTGGTTCTTT	6780	False	NA	22	True	AATAAA	-22	NA	4311472	4323843	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4312052_4317181_4317281_4318345_4318506_4318871_4318952_4322985_4323238_4323347_4323437_4323532
H1_mix_00042819	chr19	+	1952	13	FSM	ENSG00000008382.16_ENSG00000269425.1	ENST00000599840.6	1614	13	-378	40	-343	0	multi-exon	FALSE	canonical	3	58	junction_1	28.6078611962206	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCCGGATGGGCTCAGGTA	93	False	NA	-34	True	NA	NA	NA	4343183	4360038	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4343601_4343707_4343995_4345744_4345982_4352896_4353030_4354044_4354130_4354323_4354421_4354948_4355022_4355096_4355174_4357252_4357422_4357514_4357586_4358082_4358173_4359162_4359256_4359915
H1_mix_00042820	chr19	+	1567	12	FSM	ENSG00000008382.16	ENST00000262966.12	1567	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_10	44.1069324211433	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGGTCTCCCCAAGGCTG	436	False	NA	14	True	AATAAA	-24	NA	4343526	4360086	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4343601_4343707_4343995_4345744_4345982_4352896_4353030_4354044_4354130_4354323_4354421_4354948_4355022_4355096_4355174_4357252_4357422_4357514_4357586_4359162_4359256_4359915
H1_mix_00042821	chr19	+	2550	11	FSM	ENSG00000008382.16	ENST00000359935.8	1475	11	-27	-1048	0	1043	multi-exon	FALSE	canonical	3	18	junction_6	46.1415214313529	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCAGGGTCCTATCTCT	436	False	NA	NA	False	NA	NA	NA	4343526	4361129	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4343601_4343707_4343995_4345744_4345982_4352896_4353030_4354044_4354130_4354323_4354421_4357252_4357422_4357514_4357586_4358082_4358173_4359162_4359256_4359915
H1_mix_00042823	chr19	+	1445	12	FSM	ENSG00000008382.16	ENST00000597036.5	1445	12	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_7	42.1151510790739	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCCGGATGGGCTCAGGTA	11	False	NA	-34	True	NA	NA	NA	4343710	4360038	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4343995_4345744_4345982_4352896_4353030_4354044_4354130_4354323_4354421_4354948_4355022_4355096_4355174_4357339_4357422_4357514_4357586_4358082_4358173_4359162_4359256_4359915
H1_mix_00042824	chr19	+	379	3	FSM	ENSG00000008382.16	ENST00000601877.1	379	3	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_2	3.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCGTGGCCAGGCCCAGT	9290	False	NA	6	True	AATAAA	-13	NA	4352989	4354577	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4353030_4354044_4354130_4354323
H1_mix_00042825	chr19	+	3366	15	FSM	ENSG00000167670.16	ENST00000301280.10	3366	15	0	0	0	0	multi-exon	FALSE	canonical	3	539	junction_3	70.356417690244	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTCTGTCTGTCTTTTC	1	True	NA	24	True	TATAAA	-19	NA	4402639	4443397	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4402815_4405911_4405963_4408902_4409760_4418019_4418077_4422565_4422796_4423334_4423396_4423805_4423875_4428663_4428891_4429437_4429607_4429707_4429789_4430548_4430642_4431951_4432208_4433069_4433540_4442244_4442342_4442924
H1_mix_00042826	chr19	+	3834	14	ISM	ENSG00000167670.16	ENST00000301280.10	3366	15	106	9	29	-9	intron_retention	FALSE	canonical	3	539	junction_3	72.5729993639948	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCCTGAGCTGCTCTGTC	55	False	NA	15	True	TATAAA	-10	NA	4402745	4443388	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_4402815_4405911_4405963_4408902_4409760_4418019_4418077_4422565_4422796_4423334_4423396_4423805_4423875_4428663_4428891_4429437_4429607_4429707_4429789_4430548_4430642_4431951_4432208_4433069_4433540_4442244
H1_mix_00042827	chr19	+	2558	1	FSM	ENSG00000280239.1	ENST00000624986.1	2027	1	-542	11	-542	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAATAATGTAGAAAGGAC	NA	False	NA	NA	False	AATAAA	-16	NA	4448267	4450825	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4448300_4450800
H1_mix_00042828	chr19	+	2223	15	NIC	ENSG00000167674.15	novel	2267	16	NA	NA	-89	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_14	133.325843752233	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAAATCACTTTTAT	8	True	NA	-3	True	TATAAA	-14	NA	4472207	4502201	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_4472423_4475274_4475352_4475444_4475584_4488675_4488877_4491565_4491683_4491763_4491836_4493702_4493863_4493981_4494058_4494165_4494476_4496301_4496406_4497957_4498032_4498305_4498377_4498813_4498916_4499490_4499705_4501910
H1_mix_00042829	chr19	+	2319	16	FSM	ENSG00000167674.15	ENST00000616600.5	2267	16	-52	0	-52	0	multi-exon	FALSE	canonical	3	398	junction_6	50.6234025811076	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATCACTTTTATTGGCTT	-26	True	NA	3	True	TATAAA	-20	NA	4472244	4502207	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4472423_4475274_4475352_4475444_4475584_4488675_4488877_4491565_4491683_4491763_4491836_4493702_4493863_4493981_4494058_4494165_4494476_4496301_4496406_4497957_4498032_4498305_4498377_4498813_4498916_4499490_4499705_4501190_4501318_4501910
H1_mix_00042830	chr19	+	2264	16	FSM	ENSG00000167674.15	ENST00000621835.4	2255	16	-9	0	0	0	multi-exon	FALSE	canonical	3	191	junction_15	89.161027859087	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATCACTTTTATTGGCTT	26	True	NA	3	True	TATAAA	-20	NA	4472296	4502207	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4472423_4475274_4475352_4475444_4475584_4488675_4488877_4491565_4491683_4491763_4491836_4493702_4493863_4493981_4494058_4494165_4494476_4496301_4496406_4497957_4498032_4498305_4498377_4498813_4498916_4499490_4499705_4501190_4501318_4501913
H1_mix_00042831	chr19	+	2255	16	NNC	ENSG00000167674.15	novel	2267	16	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_6	124.672085443731	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAAATCACTTTTAT	29	True	NA	-3	True	TATAAA	-14	NA	4472299	4502201	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_4472423_4475274_4475352_4475444_4475584_4488675_4488877_4491565_4491683_4491763_4491836_4493705_4493863_4493981_4494058_4494165_4494476_4496301_4496406_4497957_4498032_4498305_4498377_4498813_4498916_4499490_4499705_4501190_4501318_4501910
H1_mix_00042832	chr19	+	821	7	FSM	ENSG00000167674.15	ENST00000589486.5	805	7	-16	0	-16	0	multi-exon	FALSE	canonical	3	16	junction_1	166.494911500489	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGTGGCCATGGCGCGGTC	9	True	NA	NA	False	NA	NA	NA	4474875	4493762	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4475031_4475274_4475352_4475444_4475584_4488675_4488877_4491565_4491683_4491763_4491836_4493702
H1_mix_00042834	chr19	+	1349	4	FSM	ENSG00000167674.15	ENST00000592417.2	1349	4	0	0	0	0	multi-exon	FALSE	canonical	3	537	junction_3	13.9522996909709	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCACTTTTATTGGCTTG	9601	False	NA	4	True	TATAAA	-21	NA	4498361	4502208	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4498377_4498813_4498916_4499490_4499705_4501190
H1_mix_00042835	chr19	+	757	3	Antisense	novelGene_ENSG00000167680.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	10	junction_2	1	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCTTTACCCTGTTTTG	4890	False	NA	4	True	AATAAA	-18	NA	4580556	4586064	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr19_+_4580773_4585411_4585579_4585690
H1_mix_00042836	chr19	+	3812	2	FSM	ENSG00000185361.9	ENST00000327473.9	3816	2	0	4	0	-4	multi-exon	FALSE	canonical	3	53	junction_1	0	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCGCAGTGGCTCATGTC	-17	True	NA	12	True	AATAAA	-15	NA	4639515	4655564	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4639630_4651866
H1_mix_00042837	chr19	+	9541	1	FSM	ENSG00000141965.5	ENST00000269856.5	9540	1	-1	0	-1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATCTCCTCCATGAAGT	1	True	NA	112	True	ATTAAA	-19	NA	4791732	4801273	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4791700_4801300
H1_mix_00042838	chr19	+	3987	17	FSM	ENSG00000276043.5	ENST00000620565.4	3965	17	-22	0	-22	0	multi-exon	TRUE	canonical	3	195	junction_1	70.0070308969035	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACTTGATTGTGTCTTCC	NA	False	NA	-2	True	AATAAA	-14	NA	4909407	4962150	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4909656_4910875_4911039_4929221_4929477_4930715_4930877_4932740_4932957_4941527_4941629_4941744_4941932_4944131_4944256_4944342_4944451_4945860_4945966_4947104_4947212_4950610_4950774_4950858_4950997_4954349_4954489_4954649_4954823_4956708_4956814_4960656
H1_mix_00042839	chr19	+	3903	17	FSM	ENSG00000276043.5	ENST00000615884.4	2651	17	-63	-1189	-63	0	multi-exon	FALSE	canonical	3	190	junction_1	70.8929375449346	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACTTGATTGTGTCTTCC	-22	True	NA	-2	True	AATAAA	-14	NA	4910082	4962150	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4910247_4910875_4911039_4929221_4929477_4930715_4930877_4932740_4932957_4941527_4941629_4941744_4941932_4944131_4944256_4944342_4944451_4945860_4945966_4947104_4947212_4950610_4950774_4950858_4950997_4954349_4954489_4954649_4954823_4956708_4956814_4960656
H1_mix_00042840	chr19	+	5705	24	FSM	ENSG00000127663.15	ENST00000611640.4	5703	24	-2	0	-2	0	multi-exon	FALSE	canonical	3	145	junction_10	21.4485800905725	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCCGTTCCATGCCCCG	-2	True	NA	16	True	ATTAAA	-18	NA	4969110	5153595	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4969231_5016256_5016340_5032865_5033032_5039835_5040012_5041136_5041252_5047475_5047670_5071009_5071060_5077366_5077471_5082366_5082505_5110621_5110819_5119117_5119220_5119652_5119853_5131075_5131546_5131886_5132008_5133882_5134062_5135338_5135562_5137261_5137339_5137620_5137677_5137961_5138071_5143966_5144153_5144247_5144413_5144782_5144903_5150357_5150451_5151334
H1_mix_00042841	chr19	+	5610	23	FSM	ENSG00000127663.15	ENST00000159111.9	5604	23	-2	-4	-2	4	multi-exon	FALSE	canonical	3	20	junction_10	40.6246678308098	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCATGCCCCGGCAAGTG	-2	True	NA	23	True	ATTAAA	-25	NA	4969110	5153602	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4969231_5016256_5016340_5032865_5033032_5039835_5040012_5041136_5041252_5047475_5047670_5071009_5071060_5077366_5077471_5082366_5082505_5110621_5110819_5119652_5119853_5131075_5131546_5131886_5132008_5133882_5134062_5135338_5135562_5137261_5137339_5137620_5137677_5137961_5138071_5143966_5144153_5144247_5144413_5144782_5144903_5150357_5150451_5151334
H1_mix_00042843	chr19	+	313	1	FSM	ENSG00000274447.1	ENST00000619774.1	450	1	-100	237	-100	-237	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGCCATCCTGAAGACAGA	3594	False	NA	NA	False	NA	NA	NA	5294146	5294459	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_5294100_5294500
H1_mix_00042844	chr19	+	2713	19	FSM	ENSG00000160633.13	ENST00000589863.5	2708	19	-5	0	-5	0	multi-exon	FALSE	canonical	2	5	junction_2	288.555646472411	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTTAAACTGTGTAAAAATA	NA	False	NA	-73	True	NA	NA	NA	5623029	5668349	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_5623395_5626404_5626490_5645336_5645400_5648015_5648044_5648988_5649500_5649925_5649976_5650977_5651073_5653114_5653265_5653337_5653421_5654060_5654201_5654367_5654457_5657240_5657348_5661520_5661809_5664021_5664160_5664396_5664440_5667045_5667165_5667346_5667451_5667819_5667887_5668161
H1_mix_00042846	chr19	+	3058	21	FSM	ENSG00000160633.13	ENST00000292123.9	3042	21	-16	0	0	0	multi-exon	FALSE	canonical	3	376	junction_18	245.553537950484	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGTGTCATTTCTTTA	-27	True	NA	56	True	AATAAA	-26	NA	5623082	5668478	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_5623395_5626404_5626490_5641593_5641659_5641739_5641947_5645336_5645400_5648015_5648044_5648988_5649500_5649925_5649976_5650977_5651073_5653114_5653265_5653337_5653421_5654060_5654201_5654367_5654457_5657240_5657348_5661517_5661809_5664021_5664160_5664396_5664440_5667045_5667165_5667352_5667451_5667819_5667887_5668161
H1_mix_00042847	chr19	+	3064	21	FSM	ENSG00000160633.13	ENST00000588852.2	3064	21	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_14	192.703522282287	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGTGTCATTTCTTTA	-27	True	NA	56	True	AATAAA	-26	NA	5623082	5668478	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_5623395_5626404_5626490_5641593_5641659_5641739_5641947_5645336_5645400_5648015_5648044_5648988_5649500_5649925_5649976_5650977_5651073_5653114_5653265_5653337_5653421_5654060_5654201_5654367_5654457_5657240_5657348_5661517_5661809_5664021_5664160_5664396_5664440_5667045_5667165_5667346_5667451_5667819_5667887_5668161
H1_mix_00042848	chr19	+	998	9	FSM	ENSG00000160633.13	ENST00000586934.5	995	9	-3	0	0	0	multi-exon	FALSE	canonical	3	56	junction_6	381.63521522522	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGATCTCCGTGGAGA	8	True	NA	NA	False	NA	NA	NA	5623117	5653242	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_5623395_5626404_5626490_5641593_5641659_5641739_5641947_5645336_5645400_5648015_5648044_5649925_5649976_5650977_5651073_5653114
H1_mix_00042849	chr19	+	3049	21	FSM	ENSG00000160633.13	ENST00000592224.5	3014	21	-35	0	0	0	multi-exon	FALSE	canonical	3	865	junction_14	147.194802897385	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATACCCTTTATTTAAAGT	-27	True	NA	44	True	AATAAA	-14	NA	5623082	5668466	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_5623395_5626404_5626490_5641593_5641659_5641739_5641947_5645336_5645400_5648015_5648044_5648988_5649500_5649925_5649976_5650977_5651073_5653114_5653265_5653337_5653421_5654060_5654201_5654367_5654457_5657240_5657348_5661520_5661809_5664021_5664160_5664396_5664440_5667045_5667165_5667346_5667451_5667819_5667887_5668161
H1_mix_00042850	chr19	+	3034	21	NIC	ENSG00000160633.13	novel	3042	21	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	376	junction_18	213.871801554109	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGTGTCATTTCTTTA	-6	True	NA	56	True	AATAAA	-26	NA	5623103	5668478	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_5623395_5626404_5626490_5641593_5641659_5641739_5641947_5645336_5645400_5648015_5648044_5648988_5649500_5649925_5649976_5650977_5651073_5653114_5653265_5653337_5653421_5654060_5654201_5654367_5654457_5657240_5657348_5661520_5661809_5664021_5664160_5664396_5664440_5667045_5667165_5667352_5667451_5667819_5667887_5668161
H1_mix_00042855	chr19	+	1472	6	FSM	ENSG00000167733.14	ENST00000301382.8	1457	6	-15	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	26.4983018323816	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTTGTTCAAATTCCT	-22	True	NA	17	True	AATAAA	-19	NA	5681008	5688522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_5681272_5684818_5684906_5686899_5686992_5687281_5687376_5687502_5687669_5687752
H1_mix_00042856	chr19	+	1715	8	FSM	ENSG00000167733.14	ENST00000339423.7	1697	8	-18	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	34.3612263685541	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTTGTTCAAATTCCT	-22	True	NA	17	True	AATAAA	-19	NA	5681008	5688522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_5681272_5684818_5684906_5684988_5685120_5686415_5686528_5686899_5686992_5687281_5687376_5687502_5687669_5687752
H1_mix_00042857	chr19	+	754	4	FSM	ENSG00000167733.14	ENST00000422535.6	730	4	-24	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	23.4236347876812	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCGGCGTGGTGTCAGG	-7	True	NA	NA	False	AATAAA	-23	NA	5681023	5685589	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_5681272_5684818_5684906_5684988_5685120_5685301
H1_mix_00042859	chr19	+	1409	5	ISM	ENSG00000167733.14	ENST00000301382.8	1457	6	131	1	-4	-1	intron_retention	FALSE	canonical	3	41	junction_2	28.9568644711405	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTGTTGTTCAAATTCC	-6	True	NA	16	True	AATAAA	-18	NA	5681154	5688521	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_5681272_5684818_5684906_5686899_5686992_5687281_5687376_5687502
H1_mix_00042860	chr19	+	1362	6	NIC	ENSG00000167733.14	novel	1457	6	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	14.0199857346575	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTTGTTCAAATTCCT	-4	True	NA	17	True	AATAAA	-19	NA	5681156	5688522	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_5681272_5684780_5684906_5686899_5686992_5687281_5687376_5687502_5687669_5687752
H1_mix_00042863	chr19	+	788	3	FSM	ENSG00000130255.13	ENST00000394580.2	556	3	-246	14	-225	0	multi-exon	FALSE	canonical	3	12706	junction_2	881	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTTGACAGAAGCCCTG	2742	False	NA	23	True	AATAAA	-3	NA	5690069	5691653	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_5690601_5691318_5691454_5691531
H1_mix_00042864	chr19	+	918	2	FSM	ENSG00000130255.13	ENST00000590786.5	907	2	-11	0	0	0	multi-exon	FALSE	canonical	3	7850	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCGCCATGGAGTTACTGAA	-1	True	NA	NA	False	NA	NA	NA	5690294	5691390	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_5690328_5690505
H1_mix_00042865	chr19	+	607	4	FSM	ENSG00000130255.13	ENST00000347512.8	607	4	0	0	0	0	multi-exon	FALSE	canonical	3	7850	junction_1	2798.47784022354	2014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGATTAAGCCGACTGAG	-1	True	NA	21	True	ATTAAA	-17	NA	5690294	5691875	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_5690328_5690505_5690601_5691318_5691454_5691531
H1_mix_00042866	chr19	+	1528	3	FSM	ENSG00000171119.3	ENST00000303212.3	1528	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	37	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGCTGGTGATTCATCCT	-6	True	NA	26	True	GATAAA	-15	NA	5805066	5828324	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_5805452_5823767_5824335_5827748
H1_mix_00042867	chr19	+	2232	2	FSM	ENSG00000187650.4	ENST00000339485.4	2240	2	-3	11	-3	-11	multi-exon	FALSE	canonical	2	10	junction_1	0	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCACTGTTGCCCAGGCT	-2	True	NA	NA	False	TTTAAA	-9	NA	5904868	5910842	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_5905082_5908823
H1_mix_00042868	chr19	+	2954	4	NIC	ENSG00000105519.18	novel	1789	6	NA	NA	158	0	intron_retention	FALSE	canonical	1	4	junction_3	10.2089285540757	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGGCCCAGTATCTACATT	7626	False	NA	11	True	AATAAA	-21	NA	5912496	5915877	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_5914490_5914562_5914741_5914939_5915066_5915220
H1_mix_00042869	chr19	+	368	2	FSM	ENSG00000266983.2	ENST00000692109.1	388	2	18	2	9	-2	multi-exon	FALSE	canonical	3	39	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTAGCGTCTGCTGATT	-4	True	NA	11	True	AATAAA	-16	NA	5978372	5980727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_5978515_5980501
H1_mix_00042870	chr19	+	2265	6	FSM	ENSG00000125656.11	ENST00000245816.11	2410	6	0	145	0	-145	multi-exon	FALSE	canonical	3	503	junction_2	39.5808034279245	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGCCTGAGATGGGAAGT	-37	True	NA	NA	False	NA	NA	NA	6361530	6370097	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_6361773_6361868_6361941_6362445_6362543_6364451_6364640_6366257_6366364_6368537
H1_mix_00042871	chr19	+	741	4	FSM	ENSG00000125656.11	ENST00000594780.1	1007	4	0	266	0	-266	multi-exon	FALSE	canonical	3	503	junction_2	32.4174164437712	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTAGCCAGGATGGTCT	24	False	NA	NA	False	NA	NA	NA	6361673	6364924	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_6361773_6361868_6361941_6362445_6362543_6364451
H1_mix_00042873	chr19	+	970	4	FSM	ENSG00000125652.8	ENST00000245812.8	970	4	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_1	48.8011839564939	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCCCAGCACTGCAGCT	-6	True	NA	3	True	AATAAA	-13	NA	6372793	6375250	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_6373025_6374202_6374377_6374464_6374590_6374810
H1_mix_00042874	chr19	+	608	4	FSM	ENSG00000125652.8	ENST00000596657.1	603	4	-5	0	-5	0	multi-exon	FALSE	canonical	3	15	junction_1	271.101866873362	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACTGGGACATTGCAGTG	489	False	NA	11	True	AATAAA	-18	NA	6373465	6375027	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_6373558_6374202_6374377_6374464_6374590_6374810
H1_mix_00042875	chr19	+	780	5	FSM	ENSG00000130545.16	ENST00000356762.7	733	5	-47	0	-35	0	multi-exon	FALSE	canonical	3	87	junction_4	68.9002902751505	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTATTGGTGTGTTTGAG	-38	True	NA	NA	False	TATAAA	-24	NA	6464235	6467221	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_6464351_6464607_6464784_6465544_6465619_6466465_6466610_6466950
H1_mix_00042876	chr19	+	1121	4	FSM	ENSG00000130545.16	ENST00000600229.6	1086	4	-35	0	-35	0	multi-exon	FALSE	canonical	3	234	junction_3	9.41629792788369	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTATTGGTGTGTTTGAG	-38	True	NA	NA	False	TATAAA	-24	NA	6464235	6467221	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_6464351_6464607_6464784_6465544_6465619_6466465
H1_mix_00042880	chr19	+	1920	14	FSM	ENSG00000125733.18	ENST00000596758.5	1920	14	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_13	195.520001549502	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTTTATACAAAAATGGG	67	False	NA	28	True	NA	NA	NA	6739761	6751464	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_6739786_6741009_6741126_6741224_6741282_6742966_6743115_6743193_6743257_6743493_6743599_6743707_6743837_6744553_6744701_6744799_6744995_6746451_6746562_6749933_6750067_6750291_6750432_6750511_6750634_6751033
H1_mix_00042882	chr19	+	6006	8	FSM	ENSG00000130544.12	ENST00000252840.11	5759	8	-179	-68	-179	68	multi-exon	FALSE	canonical	3	10	junction_3	3.99489470117416	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGATATTCTCCTGTGAA	80	False	NA	NA	False	NA	NA	NA	7069523	7088036	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7069774_7070561_7070654_7074995_7075106_7075654_7075744_7076380_7076508_7081359_7081456_7081969_7082053_7082877
H1_mix_00042885	chr19	+	5580	20	FSM	ENSG00000104880.19	ENST00000617428.4	5514	20	-66	0	-35	0	multi-exon	FALSE	canonical	3	25	junction_1	37.4690269134299	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCGGTGACTGGCGTGCAC	-17	True	NA	13	True	AATAAA	-13	NA	7395119	7472476	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7395248_7440188_7440483_7441652_7441766_7441911_7442053_7444203_7444455_7447042_7447169_7451148_7451267_7453466_7453716_7456326_7456404_7458511_7458691_7459902_7459995_7462151_7462335_7463817_7463956_7464559_7464691_7466917_7466975_7467070_7467119_7467213_7467685_7468824_7469132_7469903_7470030_7470125
H1_mix_00042886	chr19	+	5673	20	FSM	ENSG00000104880.19	ENST00000359920.11	5733	20	60	0	60	0	multi-exon	FALSE	canonical	3	26	junction_19	37.2705166685731	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGGTGACTGGCGTGCACG	179	False	NA	14	True	AATAAA	-14	NA	7439747	7472477	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7440483_7441652_7441766_7441911_7442053_7444203_7444455_7447042_7447169_7451148_7451267_7453466_7453716_7456326_7456404_7458511_7458691_7459902_7459995_7462151_7462335_7463817_7463956_7464559_7464691_7466917_7466975_7467070_7467119_7467213_7467685_7468824_7469132_7469903_7470030_7470125_7470316_7470536
H1_mix_00042889	chr19	+	1168	2	FSM	ENSG00000090674.16	ENST00000596390.1	1178	2	-22	32	-11	-32	multi-exon	FALSE	canonical	3	151	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAGACAGGAGAATTGCT	-21	True	NA	NA	False	NA	NA	NA	7522612	7525959	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7522782_7524960
H1_mix_00042890	chr19	+	2253	13	FSM	ENSG00000090674.16	ENST00000394321.9	2253	13	0	0	0	0	multi-exon	TRUE	canonical	3	101	junction_7	20.6940342986948	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCGTTTTCATTTTTAG	-6	True	NA	12	True	AATAAA	-13	NA	7522670	7533990	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7522782_7524960_7525167_7526438_7526607_7526760_7526927_7527519_7527961_7528157_7528258_7528596_7528704_7528820_7528971_7529100_7529203_7529589_7529713_7530285_7530502_7533522_7533654_7533758
H1_mix_00042891	chr19	+	4617	35	FSM	ENSG00000032444.17	ENST00000221249.10	4617	35	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_1	74.8938579951515	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTCCTGTCGTTTTCGG	6457	False	NA	24	True	AATAAA	-16	NA	7534003	7561764	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7534240_7534749_7534903_7535508_7535578_7535932_7536021_7536190_7536274_7536448_7536547_7539917_7540059_7540148_7540309_7540629_7540711_7540922_7541052_7541353_7541435_7541521_7541685_7541983_7542068_7542560_7542671_7542760_7542929_7543006_7543085_7549906_7550113_7550297_7550430_7550516_7550641_7550993_7551108_7551361_7551438_7553871_7554016_7554208_7554273_7554554_7554724_7554892_7555076_7555248_7555368_7555606_7555764_7556452_7556570_7556654_7556725_7557167_7557285_7558849_7559152_7560647_7560765_7561013_7561111_7561207_7561318_7561487
H1_mix_00042892	chr19	+	763	8	FSM	ENSG00000032444.17	ENST00000601668.5	753	8	-10	0	-9	0	multi-exon	FALSE	canonical	3	79	junction_1	81.0439538089029	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTGAAGTGCTTTATATG	6596	False	NA	NA	False	NA	NA	NA	7534142	7540024	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7534240_7534378_7534447_7534749_7534903_7535508_7535578_7535932_7536021_7536190_7536274_7536448_7536547_7539917
H1_mix_00042893	chr19	+	4514	36	NIC	ENSG00000032444.17	novel	4617	35	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_1	76.2629928709374	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTCCTGTCGTTTTCGG	-5	True	NA	24	True	AATAAA	-16	NA	7534174	7561764	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_7534240_7534378_7534447_7534749_7534903_7535508_7535578_7535932_7536021_7536190_7536274_7536448_7536547_7539917_7540059_7540148_7540309_7540629_7540711_7540922_7541052_7541353_7541435_7541521_7541685_7541983_7542068_7542560_7542671_7542760_7542929_7543006_7543085_7549906_7550113_7550297_7550430_7550516_7550641_7550993_7551108_7551361_7551438_7553871_7554016_7554208_7554273_7554554_7554724_7554892_7555076_7555248_7555368_7555606_7555764_7556452_7556570_7556654_7556725_7557167_7557285_7558849_7559152_7560647_7560765_7561013_7561111_7561207_7561318_7561487
H1_mix_00042894	chr19	+	4443	35	NIC	ENSG00000032444.17	novel	4617	35	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	72.9057551565588	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTCCTGTCGTTTTCGG	-5	True	NA	24	True	AATAAA	-16	NA	7534174	7561764	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_7534240_7534749_7534903_7535508_7535578_7535932_7536021_7536190_7536274_7536448_7536547_7539917_7540059_7540148_7540309_7540629_7540711_7540922_7541052_7541353_7541435_7541521_7541685_7541983_7542068_7542560_7542671_7542760_7542929_7543006_7543085_7549906_7550113_7550297_7550430_7550516_7550641_7550993_7551108_7551361_7551438_7553874_7554016_7554208_7554273_7554554_7554724_7554892_7555076_7555248_7555368_7555606_7555764_7556452_7556570_7556654_7556725_7557167_7557285_7558849_7559152_7560647_7560765_7561013_7561111_7561207_7561318_7561487
H1_mix_00042896	chr19	+	4495	36	NIC	ENSG00000032444.17	novel	4617	35	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_1	74.4324594542473	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTCCTGTCGTTTTCGG	11	True	NA	24	True	AATAAA	-16	NA	7534190	7561764	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_7534240_7534378_7534447_7534749_7534903_7535508_7535578_7535932_7536021_7536190_7536274_7536448_7536547_7539917_7540059_7540148_7540309_7540629_7540711_7540922_7541052_7541353_7541435_7541521_7541685_7541983_7542068_7542560_7542671_7542760_7542929_7543006_7543085_7549906_7550113_7550297_7550430_7550516_7550641_7550993_7551108_7551361_7551438_7553874_7554016_7554208_7554273_7554554_7554724_7554892_7555076_7555248_7555368_7555606_7555764_7556452_7556570_7556654_7556725_7557167_7557285_7558849_7559152_7560647_7560765_7561013_7561111_7561207_7561318_7561487
H1_mix_00042897	chr19	+	4377	32	FSM	ENSG00000032444.17	ENST00000600737.6	4372	32	-5	0	-5	0	multi-exon	FALSE	canonical	3	184	junction_18	55.1506686623307	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTCCTGTCGTTTTCGG	-12	True	NA	24	True	AATAAA	-16	NA	7535711	7561764	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7536021_7536190_7536274_7536448_7536547_7539917_7540059_7540148_7540309_7540629_7540711_7540922_7541052_7541353_7541435_7541521_7541685_7541983_7542068_7542560_7542671_7542760_7542929_7543006_7543085_7549906_7550113_7550297_7550430_7550516_7550641_7550993_7551108_7551361_7551438_7553874_7554016_7554208_7554273_7554554_7554724_7554892_7555076_7555248_7555368_7555606_7555764_7556452_7556570_7556654_7556725_7557167_7557285_7558849_7559152_7560647_7560765_7561013_7561111_7561207_7561318_7561487
H1_mix_00042898	chr19	+	4216	31	NNC	ENSG00000032444.17	novel	4372	32	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_18	87.127467285326	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTCCTGTCGTTTTCGG	5	True	NA	24	True	AATAAA	-16	NA	7535728	7561764	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_7536021_7536190_7536274_7536448_7536547_7539917_7540059_7540148_7540309_7540629_7540711_7540922_7541052_7541353_7541435_7541521_7541685_7541983_7542068_7542560_7542671_7542760_7542929_7543006_7543085_7549906_7550113_7550297_7550430_7550516_7550641_7550993_7551108_7551361_7551438_7554208_7554273_7554554_7554724_7554892_7555076_7555248_7555368_7555606_7555764_7556452_7556570_7556654_7556725_7557167_7557285_7558849_7559152_7560647_7560765_7561013_7561111_7561207_7561318_7561490
H1_mix_00042900	chr19	+	486	2	NNC	ENSG00000076826.10	novel	4137	17	NA	NA	0	-19908	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACTTATCTGTTTTGCGA	-11	True	NA	3	True	TATAAA	-17	NA	7595862	7597523	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_7596151_7597325
H1_mix_00042902	chr19	+	4179	19	FSM	ENSG00000076826.10	ENST00000446248.4	4179	19	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_5	78.3171969195357	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAACCTTGTCCCCCCCT	28	True	NA	30	True	AATAAA	-16	NA	7595901	7618304	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7596151_7605225_7605480_7606270_7606394_7606475_7606572_7606776_7606810_7607820_7607869_7608125_7608265_7610475_7610616_7610699_7610794_7610876_7610932_7611094_7611169_7611516_7611587_7611686_7613164_7615182_7615323_7615417_7615720_7616522_7616623_7617325_7617439_7617542_7617662_7617751
H1_mix_00042903	chr19	+	4146	18	NIC	ENSG00000076826.10	novel	4179	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	72	junction_4	69.2040761245256	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAACCTTGTCCCCCCCT	28	True	NA	30	True	AATAAA	-16	NA	7595901	7618304	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_7596151_7605225_7605480_7606270_7606394_7606475_7606572_7607820_7607869_7608125_7608265_7610475_7610616_7610699_7610794_7610876_7610932_7611094_7611169_7611516_7611587_7611686_7613164_7615182_7615323_7615417_7615720_7616522_7616623_7617325_7617439_7617542_7617662_7617751
H1_mix_00042904	chr19	+	2848	6	FSM	ENSG00000076826.10	ENST00000595692.1	1667	6	-837	-344	-837	135	multi-exon	FALSE	canonical	3	299	junction_1	15.7936696179197	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCAGCCCCCAGCCAGGG	NA	False	NA	165	True	NA	NA	NA	7613796	7618439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7615323_7615417_7615720_7616522_7616623_7617325_7617439_7617542_7617662_7617751
H1_mix_00042906	chr19	+	336	4	FSM	ENSG00000229833.10	ENST00000594797.6	663	4	0	327	0	5	multi-exon	FALSE	canonical	3	2922	junction_1	200.594671470162	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTATTCTTTTATCAG	-5	True	NA	22	True	AATATA	-31	NA	7629792	7631629	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7629861_7630572_7630660_7630822_7630847_7631472
H1_mix_00042910	chr19	+	770	8	FSM	ENSG00000076944.17	ENST00000600702.5	770	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	189.083072122454	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGCCTACCTCACCTT	3679	False	NA	21	True	AATAAA	-21	NA	7642780	7647873	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7642824_7642982_7643049_7643164_7643246_7644613_7644753_7645196_7645307_7646248_7646345_7647161_7647248_7647724
H1_mix_00042911	chr19	+	1974	3	FSM	ENSG00000076944.17	ENST00000595800.1	1974	3	0	0	0	0	multi-exon	FALSE	canonical	3	501	junction_1	12.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGTGCCTACCTCACCT	5411	False	NA	20	True	AATAAA	-20	NA	7644512	7647872	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7644753_7645196_7645307_7646248
H1_mix_00042912	chr19	+	5470	2	FSM	ENSG00000181029.9	ENST00000596148.3	5508	2	-5	43	-5	-43	multi-exon	FALSE	canonical	3	494	junction_1	0	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTCATAGAGCAGGAAAAAA	-17	True	NA	-31	True	NA	NA	NA	7680827	7687660	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7680879_7682241
H1_mix_00042913	chr19	+	835	2	FSM	ENSG00000181029.9	ENST00000317378.5	790	2	-47	2	-5	0	multi-exon	FALSE	canonical	3	132	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACGTGTGTCTTGTGTCT	-17	True	NA	26	True	GATAAA	-19	NA	7680827	7682854	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7681050_7682241
H1_mix_00042914	chr19	+	765	2	FSM	ENSG00000181029.9	ENST00000426877.2	765	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGTCTTGTGTCTTGTG	34	False	NA	30	True	GATAAA	-23	NA	7680878	7682858	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7681027_7682241
H1_mix_00042915	chr19	+	411	2	FSM	ENSG00000181029.9	ENST00000595985.1	411	2	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACGTGTGTCTTGTGTCT	1350	False	NA	26	True	GATAAA	-19	NA	7682242	7682854	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7682323_7682523
H1_mix_00042917	chr19	+	3919	20	FSM	ENSG00000142459.9	ENST00000538904.7	3903	20	-16	0	-16	0	multi-exon	TRUE	canonical	3	21	junction_12	17.1021049716061	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGGCCTGCGGGCTGG	-9	True	NA	22	True	AATAAA	-18	NA	7830201	7864976	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7830382_7846495_7846680_7847731_7847922_7848920_7849146_7849255_7849331_7849996_7850123_7851433_7851578_7851680_7851771_7853085_7853184_7853272_7853334_7856014_7856069_7857091_7857125_7858190_7858332_7860560_7860690_7861877_7862019_7862121_7862278_7862387_7862535_7862971_7863068_7863184_7863281_7863423
H1_mix_00042922	chr19	+	3430	11	FSM	ENSG00000076984.18	ENST00000397981.7	3430	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	38.8021906598068	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGTCTGTGGTGTGTCAT	NA	False	NA	19	True	AATAAA	-19	NA	7903842	7914478	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7904069_7909754_7909897_7910062_7910130_7910259_7910374_7910452_7910573_7910695_7910804_7910979_7911160_7911249_7911331_7911414_7911579_7912148_7912195_7912296
H1_mix_00042925	chr19	+	1714	5	NIC	ENSG00000260001.7	novel	2575	6	NA	NA	939	0	intron_retention	FALSE	canonical	3	44	junction_1	9.87420882906575	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGGTGCAGTCAGTGAG	932	False	NA	11	True	AATAAA	-21	NA	7915768	7919097	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_7916943_7917472_7917600_7917700_7917860_7918056_7918130_7918916
H1_mix_00042926	chr19	+	999	3	FSM	ENSG00000260001.7	ENST00000566166.1	479	3	-520	0	152	0	multi-exon	FALSE	canonical	3	60	junction_1	5.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCTAAGTTCTGGTGCAGT	394	False	NA	4	True	AATAAA	-14	NA	7917107	7919090	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7917860_7918056_7918130_7918916
H1_mix_00042930	chr19	+	1823	12	FSM	ENSG00000090661.12	ENST00000558331.5	1803	12	-20	0	-10	0	multi-exon	FALSE	canonical	2	15	junction_2	137.294218666843	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGCCTGAGAACTTGG	NA	False	NA	15	True	ATTAAA	-16	NA	8209292	8262421	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_8209495_8210705_8210863_8251109_8251250_8254498_8254617_8255606_8255726_8255821_8255880_8256235_8256287_8256617_8256711_8256948_8257078_8257878_8257986_8261687_8261845_8261929
H1_mix_00042931	chr19	+	791	5	FSM	ENSG00000090661.12	ENST00000561053.5	768	5	-23	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	180.368199802515	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAGCCCAGGATGGGGCT	-3	True	NA	NA	False	NA	NA	NA	8209302	8255724	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_8209495_8210705_8210863_8251043_8251250_8254498_8254617_8255606
H1_mix_00042932	chr19	+	1693	11	NIC	ENSG00000090661.12	novel	1637	11	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_1	131.571463471377	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTCTGCCTGAGAACT	-22	True	NA	12	True	ATTAAA	-13	NA	8209328	8262418	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_8209495_8251043_8251250_8254498_8254617_8255606_8255726_8255821_8255880_8256235_8256287_8256617_8256711_8256948_8257078_8257878_8257986_8261687_8261845_8261929
H1_mix_00042934	chr19	+	1637	11	FSM	ENSG00000090661.12	ENST00000559450.5	1637	11	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	109.123599647372	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGCCTGAGAACTTGG	5	True	NA	15	True	ATTAAA	-16	NA	8209355	8262421	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_8209495_8251075_8251250_8254498_8254617_8255606_8255726_8255821_8255880_8256235_8256287_8256617_8256711_8256948_8257078_8257878_8257986_8261687_8261845_8261929
H1_mix_00042935	chr19	+	1794	12	FSM	ENSG00000090661.12	ENST00000251363.10	1780	12	-14	0	0	0	multi-exon	FALSE	canonical	3	165	junction_2	98.782422232646	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGCCTGAGAACTTGG	5	True	NA	15	True	ATTAAA	-16	NA	8209355	8262421	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_8209495_8210705_8210863_8251075_8251250_8254498_8254617_8255606_8255726_8255821_8255880_8256235_8256287_8256617_8256711_8256948_8257078_8257878_8257986_8261687_8261845_8261929
H1_mix_00042936	chr19	+	1911	13	NIC	ENSG00000090661.12	novel	1826	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	43	junction_2	159.797180478533	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGCCTGAGAACTTGG	5	True	NA	15	True	ATTAAA	-16	NA	8209355	8262421	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_8209495_8210705_8210863_8241340_8241458_8251075_8251250_8254498_8254617_8255606_8255726_8255821_8255880_8256235_8256287_8256617_8256711_8256948_8257078_8257878_8257986_8261687_8261845_8261929
H1_mix_00042937	chr19	+	1923	13	NNC	ENSG00000090661.12	novel	1780	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	175.263353430075	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTCTGCCTGAGAACT	21	True	NA	12	True	ATTAAA	-13	NA	8209371	8262418	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_8209495_8210705_8210863_8250772_8250921_8251075_8251250_8254498_8254617_8255606_8255726_8255821_8255880_8256235_8256287_8256617_8256711_8256948_8257078_8257878_8257986_8261687_8261845_8261929
H1_mix_00042939	chr19	+	912	2	FSM	ENSG00000233927.5	ENST00000602140.1	912	2	0	0	0	0	multi-exon	FALSE	canonical	3	9391	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGCGGTCTTGCCAAACG	1	True	NA	173	True	NA	NA	NA	8321494	8322492	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_8321570_8321655
H1_mix_00042941	chr19	+	1330	4	FSM	ENSG00000233927.5	ENST00000600659.3	1330	4	-1	1	0	-1	multi-exon	FALSE	canonical	3	8750	junction_3	815.075592949649	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTCTGCTGAAGTGTGGT	1	True	NA	24	True	AATAAA	-29	NA	8321494	8323339	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_8321570_8321655_8321704_8321952_8322092_8322271
H1_mix_00042942	chr19	+	551	3	ISM	ENSG00000233927.5	ENST00000600659.3	1330	4	15	944	15	0	intron_retention	FALSE	canonical	3	9391	junction_1	658.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGGTTCTTGTCTGGGTT	17	False	NA	77	True	AATAAA	-21	NA	8321510	8322396	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_8321570_8321655_8321704_8321952
H1_mix_00042943	chr19	+	334	3	FSM	ENSG00000233927.5	ENST00000417088.2	334	3	0	0	0	0	multi-exon	FALSE	canonical	3	8750	junction_2	979	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGGTTCTTGTCTGGGTT	140	False	NA	77	True	AATAAA	-21	NA	8321633	8322396	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_8321704_8321952_8322092_8322271
H1_mix_00042944	chr19	+	1724	6	FSM	ENSG00000167772.12	ENST00000393962.6	1705	6	-19	0	-5	0	multi-exon	FALSE	canonical	3	6	junction_3	17.5658760100372	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCACAGAGTTCTTGGAA	-6	True	NA	-16	True	NA	NA	NA	8364149	8374331	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_8364640_8365953_8366065_8366201_8366320_8371055_8371152_8371240_8371523_8373704
H1_mix_00042945	chr19	+	1877	7	FSM	ENSG00000167772.12	ENST00000301455.7	1872	7	-5	0	-5	0	multi-exon	FALSE	canonical	3	37	junction_3	6.89806736219163	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTTCTTTGTTCTTGTT	-6	True	NA	23	True	AATAAA	-16	NA	8364149	8374370	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_8364640_8365953_8366065_8366201_8366320_8369218_8369333_8371055_8371152_8371240_8371523_8373704
H1_mix_00042948	chr19	+	1185	4	FSM	ENSG00000099785.11	ENST00000381035.8	1192	4	7	0	7	0	multi-exon	TRUE	canonical	3	21	junction_3	99.7028919674182	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTGGACAAAATGGACTT	-29	True	NA	7	True	AATAAA	-9	NA	8413276	8439004	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_8413421_8421788_8422017_8426608_8426805_8438387
H1_mix_00042949	chr19	+	2012	6	NIC	ENSG00000099785.11	novel	1667	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	80.9108150990954	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTGGACAAAATGGACTT	-1	True	NA	7	True	AATAAA	-9	NA	8413304	8439004	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_8413795_8418536_8418808_8421788_8422017_8426608_8426805_8430657_8430868_8438387
H1_mix_00042950	chr19	+	1402	5	FSM	ENSG00000099785.11	ENST00000215555.7	1380	5	-22	0	-7	0	multi-exon	FALSE	canonical	3	97	junction_1	59.17083318663	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTTGTCAGTTATGTTT	-23	True	NA	20	True	AATAAA	-22	NA	8413282	8439017	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_8413421_8421788_8422017_8426608_8426805_8430657_8430868_8438387
H1_mix_00042951	chr19	+	1650	6	NIC	ENSG00000099785.11	novel	1667	5	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	67.2142841961439	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTTGTCAGTTATGTTT	0	True	NA	20	True	AATAAA	-22	NA	8413305	8439017	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_8413421_8418536_8418808_8421788_8422017_8426608_8426805_8430657_8430868_8438387
H1_mix_00042952	chr19	+	1667	5	FSM	ENSG00000099785.11	ENST00000602117.1	1667	5	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	42.5529082437382	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTTGTCAGTTATGTTT	2	True	NA	20	True	AATAAA	-22	NA	8418404	8439017	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_8418808_8421788_8422017_8426608_8426805_8430657_8430868_8438387
H1_mix_00042953	chr19	+	2466	17	FSM	ENSG00000099783.12	ENST00000348943.7	2568	17	101	1	-52	-1	multi-exon	FALSE	canonical	0	0	junction_3	1062.72908559755	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGGCCTGCTTGTGTGTGCT	6120	False	NA	16	True	AATAAA	-16	NA	8444867	8489113	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_8445112_8455404_8455575_8462528_8462582_8463496_8463505_8463592_8463687_8465323_8465363_8465479_8465516_8466234_8466389_8467534_8467585_8468773_8468835_8471325_8471428_8473663_8473709_8474166_8474245_8483157_8483212_8485602_8486406_8487023_8487076_8488690
H1_mix_00042954	chr19	+	2528	16	FSM	ENSG00000099783.12	ENST00000325495.9	2477	16	-55	4	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1053.21734382478	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACGGCCTGCTTGTGTGT	6172	False	NA	13	True	AATAAA	-13	NA	8444919	8489110	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_8445112_8455404_8455575_8462528_8462582_8463496_8463505_8463592_8463687_8465323_8465516_8466234_8466389_8467534_8467585_8468773_8468835_8471325_8471428_8473663_8473709_8474166_8474245_8483157_8483212_8485602_8486406_8487023_8487076_8488690
H1_mix_00042955	chr19	+	2357	16	NIC	ENSG00000099783.12	novel	2568	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	1251.56019964416	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACGGCCTGCTTGTGTGT	6172	False	NA	13	True	AATAAA	-13	NA	8444919	8489110	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_8445112_8455404_8455575_8462528_8462582_8463496_8463505_8463592_8463687_8465323_8465363_8465479_8465516_8466234_8466389_8467534_8467585_8468773_8468835_8471325_8471428_8473663_8473709_8474166_8474245_8485602_8486406_8487023_8487076_8488690
H1_mix_00042956	chr19	+	2509	15	NIC	ENSG00000099783.12	novel	2477	16	NA	NA	-35	0	intron_retention	FALSE	canonical	0	0	junction_3	1261.79900927046	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACGGCCTGCTTGTGTGT	6137	False	NA	13	True	AATAAA	-13	NA	8444884	8489110	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_8445112_8455404_8455575_8462528_8462582_8463496_8463505_8463592_8463687_8465323_8465516_8466234_8466389_8467534_8467585_8468773_8468835_8471325_8471428_8473663_8473709_8474166_8474245_8485602_8486406_8487023_8487076_8488690
H1_mix_00042959	chr19	+	2379	14	FSM	ENSG00000099783.12	ENST00000600806.5	2373	14	-6	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1379.06246774424	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACGGCCTGCTTGTGTGT	-9	True	NA	13	True	AATAAA	-13	NA	8444970	8489110	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_8445112_8455404_8455575_8463496_8463505_8463592_8463687_8465323_8465516_8466234_8466389_8467534_8467585_8468773_8468835_8471325_8471428_8474166_8474245_8483157_8483212_8485602_8486406_8487023_8487076_8488690
H1_mix_00042961	chr19	+	1147	7	FSM	ENSG00000099783.12	ENST00000597270.1	1147	7	0	0	0	0	multi-exon	FALSE	canonical	3	676	junction_6	1112.87235965716	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCCAGCTTTGACCGTGC	2585	False	NA	NA	False	NA	NA	NA	8466248	8486273	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_8466389_8467534_8467585_8468773_8468835_8471325_8471428_8473663_8473709_8474166_8474245_8485602
H1_mix_00042962	chr19	+	1809	1	FSM	ENSG00000099783.12	ENST00000602219.1	1809	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACGGCCTGCTTGTGTGT	NA	False	NA	13	True	AATAAA	-13	NA	8487301	8489110	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_8487300_8489100
H1_mix_00042963	chr19	+	3972	6	FSM	ENSG00000130803.15	ENST00000360385.7	3955	6	-17	0	-17	0	multi-exon	FALSE	canonical	3	34	junction_4	60.5243752549334	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTATGGATATTTCATT	-10	True	NA	5	True	AATAAA	-18	NA	9140379	9163408	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_9140593_9155924_9156042_9156611_9156749_9157267_9157395_9158825_9158909_9160113
H1_mix_00042964	chr19	+	4073	7	FSM	ENSG00000130803.15	ENST00000247956.11	4056	7	-17	0	-17	0	multi-exon	FALSE	canonical	3	137	junction_3	21.8784521085626	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGATATTTCATTGTTTT	-10	True	NA	10	True	AATAAA	-23	NA	9140379	9163413	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_9140593_9155924_9156042_9156611_9156749_9157267_9157395_9157979_9158076_9158825_9158909_9160113
H1_mix_00042965	chr19	+	1408	6	FSM	ENSG00000188321.14	ENST00000592504.5	1398	6	-10	0	-10	0	multi-exon	FALSE	canonical	3	42	junction_3	17.4974283824795	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATATACTCATAAGGAGTA	-19	True	NA	NA	False	NA	NA	NA	9324168	9342084	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_9324229_9324694_9324781_9337795_9337859_9338493_9338583_9339192_9339320_9341101
H1_mix_00042966	chr19	+	977	6	FSM	ENSG00000188321.14	ENST00000585352.5	967	6	-10	0	-10	0	multi-exon	FALSE	canonical	3	25	junction_2	22.9904327927945	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACTCAAGATGGAGAAAAA	-19	True	NA	NA	False	NA	NA	NA	9324168	9342148	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_9324229_9324694_9324781_9338493_9338583_9339192_9339320_9341101_9341185_9341616
H1_mix_00042967	chr19	+	1512	7	FSM	ENSG00000188321.14	ENST00000592896.5	1488	7	-24	0	-6	0	multi-exon	FALSE	canonical	3	11	junction_3	24.6170672501823	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCTTATAAAACACAGGCG	-15	True	NA	NA	False	NA	NA	NA	9324172	9342465	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_9324229_9324694_9324781_9337795_9338018_9338493_9338583_9339192_9339320_9341101_9341185_9341616
H1_mix_00042968	chr19	+	2976	6	FSM	ENSG00000188321.14	ENST00000587557.5	2991	6	15	0	15	0	multi-exon	FALSE	canonical	3	25	junction_2	22.3839228018683	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATCCTGAGTTATCTCAA	38	False	NA	16	True	AATAAA	-18	NA	9323786	9343843	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_9324229_9324694_9324781_9338493_9338583_9339192_9339320_9341101_9341185_9341694
H1_mix_00042969	chr19	+	4681	7	FSM	ENSG00000188321.14	ENST00000603380.6	4675	7	-6	0	-6	0	multi-exon	FALSE	canonical	3	39	junction_6	17.6580167503476	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAATACACTTCCCAATT	-15	True	NA	NA	False	AATAAA	-24	NA	9324172	9345871	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_9324229_9324694_9324781_9337795_9337859_9338493_9338583_9339192_9339320_9341101_9341185_9341694
H1_mix_00042970	chr19	+	597	7	FSM	ENSG00000270011.8	ENST00000604886.5	587	7	-10	0	-5	0	multi-exon	FALSE	canonical	3	10	junction_2	22.2317340754157	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACAGCTGAAGACAGATG	-19	True	NA	NA	False	NA	NA	NA	9324168	9379569	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_9324229_9324694_9324781_9364861_9364949_9376315_9376424_9378258_9378345_9378961_9379089_9379526
H1_mix_00042971	chr19	+	2690	7	NIC	ENSG00000188321.14	novel	2732	7	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_6	18.3431791743477	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATCCTGAGTTATCTCAA	26	False	NA	16	True	AATAAA	-18	NA	9324213	9343843	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_9324229_9324694_9324781_9337795_9337859_9338493_9338583_9339192_9339320_9341101_9341185_9341616
H1_mix_00042973	chr19	+	5080	6	FSM	ENSG00000188321.14	ENST00000393883.6	5095	6	0	15	0	12	multi-exon	FALSE	canonical	3	39	junction_5	18.9589029218465	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAATTTATGGAGTTTGA	64	False	NA	NA	False	AATAAA	-36	NA	9324251	9345883	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_9324781_9337795_9337859_9338493_9338583_9339192_9339320_9341101_9341185_9341694
H1_mix_00042974	chr19	+	2645	6	NIC	ENSG00000188321.14	novel	5095	6	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	26.6863260865935	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATCCTGAGTTATCTCAA	106	False	NA	16	True	AATAAA	-18	NA	9324293	9343843	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_9324405_9324694_9324781_9338493_9338583_9339192_9339320_9341101_9341185_9341694
H1_mix_00042976	chr19	+	2977	9	NNC	ENSG00000188629.13	novel	1920	6	NA	NA	-11747	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	18.3469173159962	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGCTGGCAATGTGGAC	NA	False	NA	17	True	AATAAA	-14	NA	9351272	9382185	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_9352005_9364861_9364949_9371609_9371753_9376315_9376424_9378258_9378345_9378961_9379089_9379526_9379620_9380056_9380140_9380667
H1_mix_00042981	chr19	+	2426	4	FSM	ENSG00000267106.9	ENST00000587536.6	2413	4	-13	0	-4	0	multi-exon	FALSE	canonical	3	49	junction_1	41.4916323558806	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGAGTGAGACTCCATCT	174	False	NA	NA	False	NA	NA	NA	9621473	9635446	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_9621646_9626783_9626861_9632227_9632418_9633459
H1_mix_00042983	chr19	+	311	3	FSM	ENSG00000198258.11	ENST00000589960.5	307	3	-4	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	1788	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTGTTGTCTCTGTAT	-27	True	NA	20	True	AATAAA	-14	NA	9827891	9830115	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_9827985_9828326_9828394_9829964
H1_mix_00042985	chr19	+	1461	4	FSM	ENSG00000198258.11	ENST00000589372.1	1450	4	-11	0	0	0	multi-exon	FALSE	canonical	3	3585	junction_1	530.014045935472	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTGTAAAAACTCACCTT	-4	True	NA	-19	True	NA	NA	NA	9827914	9830076	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_9827985_9828326_9828394_9828591_9828676_9828836
H1_mix_00042990	chr19	+	1011	5	FSM	ENSG00000127445.14	ENST00000589058.5	536	5	0	-475	0	0	multi-exon	FALSE	canonical	3	54	junction_1	886.777311392212	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGTGTCTCATTTCTC	52	False	NA	20	True	ATTAAA	-20	NA	9835368	9849689	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_9835403_9836822_9836876_9838435_9838649_9848029_9848141_9849089
H1_mix_00042994	chr19	+	2027	8	FSM	ENSG00000130813.18	ENST00000591813.5	1481	8	-231	-315	-13	0	multi-exon	FALSE	canonical	3	16	junction_6	66.2635430901272	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTACCAGAGGGGCGTC	-15	True	NA	14	True	AATAAA	-16	NA	10086108	10093242	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10086449_10086928_10087053_10087250_10087301_10089656_10089696_10089897_10090048_10091249_10091354_10091583_10091631_10092069
H1_mix_00042995	chr19	+	1948	8	FSM	ENSG00000130813.18	ENST00000253110.16	1928	8	-20	0	0	0	multi-exon	FALSE	canonical	3	96	junction_6	39.8241030492021	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTACCAGAGGGGCGTCT	137	False	NA	15	True	AATAAA	-17	NA	10086296	10093243	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10086449_10086928_10087053_10087250_10087301_10089656_10089696_10089897_10090048_10091249_10091354_10091475_10091631_10092069
H1_mix_00042998	chr19	+	1575	11	FSM	ENSG00000130810.20	ENST00000393793.5	1575	11	0	0	0	0	multi-exon	FALSE	canonical	3	650	junction_6	71.4016806524888	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCCCAGCCCTTCCACTC	15	False	NA	6	True	CATAAA	-8	NA	10106418	10111254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10106672_10107504_10107607_10107803_10107855_10107963_10108135_10109630_10109708_10109912_10110021_10110122_10110247_10110323_10110403_10110484_10110615_10110696_10110867_10110944
H1_mix_00043002	chr19	+	757	5	FSM	ENSG00000130810.20	ENST00000444703.1	757	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_4	283.206086622445	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTCCACGTCAGCGTTTG	382	False	NA	48	True	AGTAAA	-16	NA	10110145	10111296	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10110247_10110323_10110403_10110484_10110615_10110696_10110792_10110944
H1_mix_00043004	chr19	+	1423	8	FSM	ENSG00000105364.14	ENST00000590669.5	1423	8	0	0	0	0	multi-exon	FALSE	canonical	3	972	junction_4	58.4706449984145	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCAAAGTCACCTCTGTC	41	True	NA	NA	False	NA	NA	NA	10252009	10259125	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10252311_10252396_10252464_10252550_10252702_10254588_10254641_10256707_10256826_10258221_10258329_10258412_10258523_10258608
H1_mix_00043005	chr19	+	1218	9	FSM	ENSG00000105364.14	ENST00000253099.11	1218	9	0	0	0	0	multi-exon	FALSE	canonical	3	917	junction_8	72.1819532501026	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAACTTCTCAGTGTCATT	-21	True	NA	18	True	AATAAA	-28	NA	10252213	10260055	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10252311_10252396_10252464_10252550_10252702_10254588_10254641_10256707_10256826_10258221_10258329_10258412_10258523_10258608_10258686_10259616
H1_mix_00043006	chr19	+	845	6	FSM	ENSG00000105364.14	ENST00000588502.5	827	6	-18	0	0	0	multi-exon	FALSE	canonical	3	972	junction_3	64.7197033367737	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACAGAGCATCGTGGAGG	23	True	NA	NA	False	NA	NA	NA	10252257	10258623	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10252464_10252550_10252702_10254588_10254641_10256707_10256826_10258221_10258329_10258412
H1_mix_00043013	chr19	+	4703	15	FSM	ENSG00000065989.16	ENST00000293683.9	2583	15	-111	-2009	-111	0	multi-exon	TRUE	canonical	3	7	junction_1	9.87679200996777	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCTGGCTGATGTGGCT	2157	False	NA	11	True	ATTAAA	-17	NA	10430733	10469630	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10431087_10446217_10446410_10448916_10448954_10449079_10449151_10450602_10450653_10450828_10450942_10454828_10454923_10457878_10458103_10459399_10459499_10459594_10459760_10461003_10461104_10461525_10461681_10461876_10462000_10463792_10463976_10466886
H1_mix_00043018	chr19	+	1619	9	FSM	ENSG00000130734.10	ENST00000588667.5	1619	9	0	0	0	0	multi-exon	TRUE	canonical	3	38	junction_3	107.713740999002	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTGGGTGTGGCTGGGCGC	66	False	NA	30	True	AATAAA	-15	NA	10543970	10553418	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10544326_10544782_10544867_10544956_10545131_10547188_10547254_10548903_10549035_10551896_10551976_10552044_10552122_10552204_10552325_10552884
H1_mix_00043019	chr19	+	3759	22	NIC	ENSG00000129353.15	novel	3301	22	NA	NA	-23	0	intron_retention	TRUE	canonical	3	240	junction_21	208.469131251625	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGTCCAGGCCTGGTGTG	NA	False	NA	18	True	AATAAA	-12	NA	10602433	10644550	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_10602562_10626252_10626302_10627721_10627796_10627919_10628005_10631056_10631142_10631274_10631386_10631474_10631536_10631625_10631750_10631867_10631952_10632043_10632157_10634755_10634888_10634973_10635074_10635162_10635256_10635430_10635516_10636322_10636586_10636661_10636757_10637643_10637748_10637855_10637930_10638022_10638094_10638226_10638316_10642366_10642452_10642896
H1_mix_00043020	chr19	+	3301	22	FSM	ENSG00000129353.15	ENST00000407327.8	3301	22	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_1	161.216309388034	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGTCCAGGCCTGGTGTG	30	True	NA	18	True	AATAAA	-12	NA	10602509	10644550	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10602562_10626252_10626302_10627721_10627796_10627919_10628005_10631056_10631142_10631274_10631386_10631474_10631536_10631625_10631750_10631867_10631952_10632043_10632157_10634755_10634888_10634973_10635074_10635162_10635256_10635430_10635516_10636322_10636586_10636661_10636757_10637643_10637748_10637855_10637930_10638022_10638094_10638226_10638316_10642366_10642452_10643278
H1_mix_00043022	chr19	+	3789	22	FSM	ENSG00000129353.15	ENST00000586078.5	3784	22	-5	0	0	0	multi-exon	FALSE	canonical	3	240	junction_21	179.389301637389	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCCTGGTGTGTTTGTTG	-20	True	NA	25	True	AATAAA	-19	NA	10625519	10644557	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10625671_10626252_10626302_10627721_10627796_10627919_10628005_10631056_10631142_10631274_10631386_10631474_10631536_10631625_10631750_10631867_10631952_10632043_10632157_10634755_10634888_10634973_10635074_10635162_10635256_10635430_10635516_10636322_10636586_10636661_10636757_10637643_10637748_10637855_10637930_10638022_10638094_10638226_10638316_10642366_10642452_10642896
H1_mix_00043023	chr19	+	3374	22	FSM	ENSG00000129353.15	ENST00000335757.10	3374	22	0	0	0	0	multi-exon	FALSE	canonical	3	610	junction_1	119.205932829573	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCCTGGTGTGTTTGTTG	13	True	NA	25	True	AATAAA	-19	NA	10625552	10644557	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10625671_10626252_10626302_10627721_10627796_10627919_10628005_10631056_10631142_10631274_10631386_10631474_10631536_10631625_10631750_10631867_10631952_10632043_10632157_10634755_10634888_10634973_10635074_10635162_10635256_10635430_10635516_10636322_10636586_10636661_10636757_10637643_10637748_10637855_10637930_10638022_10638094_10638226_10638316_10642366_10642452_10643278
H1_mix_00043026	chr19	+	2577	8	FSM	ENSG00000129353.15	ENST00000589561.5	2577	8	0	0	0	0	multi-exon	FALSE	canonical	3	638	junction_7	136.33646853671	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGGCCTGGTGTGTTTGT	617	False	NA	23	True	AATAAA	-17	NA	10635803	10644555	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10636586_10636661_10636757_10637643_10637748_10637855_10637930_10638022_10638094_10638226_10638316_10642366_10642452_10643278
H1_mix_00043027	chr19	+	1300	7	FSM	ENSG00000129353.15	ENST00000586549.1	1300	7	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_6	392.383492970277	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGGAGTTAGGCTGAATT	1195	False	NA	NA	False	NA	NA	NA	10637743	10644130	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10637748_10637855_10637930_10638022_10638094_10638226_10638316_10642366_10642452_10642896_10643022_10643278
H1_mix_00043030	chr19	+	860	6	FSM	ENSG00000129351.17	ENST00000589600.5	839	6	-21	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	779.283157780277	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCCATTGTCCCTGACCA	6	True	NA	NA	False	GATAAA	-13	NA	10654360	10677236	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10654488_10666491_10666650_10670515_10670609_10670973_10671204_10671357_10671536_10677162
H1_mix_00043031	chr19	+	953	8	FSM	ENSG00000129351.17	ENST00000590009.5	953	8	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_1	403.110356085866	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAAATCCATTGGCACG	-14	True	NA	NA	False	NA	NA	NA	10655023	10679831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10655124_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815
H1_mix_00043035	chr19	+	3219	19	FSM	ENSG00000129351.17	ENST00000590261.5	3219	19	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_17	429.802642765718	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCCCGTCTTAGGCCTGGG	2831	False	NA	9	True	AATAAA	-14	NA	10670605	10689846	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683136_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10687345_10687709_10688549_10688679_10689178
H1_mix_00043039	chr19	+	870	5	FSM	ENSG00000213339.9	ENST00000590705.5	846	5	-24	0	0	0	multi-exon	FALSE	canonical	3	344	junction_4	38.5259652701915	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGGCTGCCGAAGGACAAG	NA	False	NA	NA	False	NA	NA	NA	10701429	10712256	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10701704_10701949_10702255_10707301_10707381_10707499_10707616_10712160
H1_mix_00043040	chr19	+	1596	9	FSM	ENSG00000213339.9	ENST00000589488.5	1571	9	-25	0	-25	0	multi-exon	FALSE	canonical	3	344	junction_5	29.5074143225055	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTTTTATTGTAACTTA	NA	False	NA	6	True	GGGGCT	-31	NA	10701404	10713345	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10701704_10701949_10702019_10702115_10702255_10707301_10707381_10707499_10707616_10712160_10712629_10712757_10712868_10712952_10713041_10713117
H1_mix_00043041	chr19	+	1338	10	FSM	ENSG00000213339.9	ENST00000250237.10	1329	10	-9	0	0	0	multi-exon	FALSE	canonical	3	326	junction_6	37.9749755158854	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGTGTGTCTGTGTCTTC	NA	False	NA	26	True	NA	NA	NA	10701429	10713365	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10701704_10701949_10702019_10702115_10702255_10707301_10707381_10707499_10707616_10712160_10712300_10712552_10712629_10712757_10712868_10712952_10713041_10713117
H1_mix_00043042	chr19	+	2052	4	FSM	ENSG00000213339.9	ENST00000587861.5	2034	4	-18	0	-18	0	multi-exon	FALSE	canonical	3	387	junction_1	18.1842422626478	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGAGTGTGTCTGTGTCTT	9333	False	NA	25	True	NA	NA	NA	10711021	10713364	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10712629_10712757_10712868_10712952_10713041_10713117
H1_mix_00043044	chr19	+	3657	21	FSM	ENSG00000079805.19	ENST00000389253.9	3633	21	-24	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	193.349547452276	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTGTGGGCCTCTTG	-21	True	NA	24	True	AATAAA	-29	NA	10718054	10831903	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10718404_10759737_10759812_10772478_10772629_10775702_10775907_10777117_10777217_10782959_10783121_10786563_10786707_10793719_10793856_10795371_10795440_10797379_10797519_10798485_10798573_10802287_10802359_10805915_10805968_10808568_10808581_10812263_10812378_10819979_10820090_10823787_10823900_10825056_10825222_10829035_10829269_10830126_10830379_10830977
H1_mix_00043045	chr19	+	3657	21	FSM	ENSG00000079805.19	ENST00000355667.11	3633	21	-24	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	230.15670748427	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTGTGGGCCTCTTG	-21	True	NA	24	True	AATAAA	-29	NA	10718054	10831903	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10718404_10759737_10759812_10772478_10772629_10775702_10775907_10777117_10777217_10782959_10783121_10786563_10786707_10793719_10793856_10795371_10795440_10796060_10796200_10798485_10798573_10802287_10802359_10805915_10805968_10808568_10808581_10812263_10812378_10819979_10820090_10823787_10823900_10825056_10825222_10829035_10829269_10830126_10830379_10830977
H1_mix_00043046	chr19	+	3635	20	NIC	ENSG00000079805.19	novel	3633	21	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	275.029608076221	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTGTGGGCCTCTTG	-14	True	NA	24	True	AATAAA	-29	NA	10718061	10831903	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_10718404_10759737_10759812_10772478_10772629_10775702_10775907_10777117_10777217_10782959_10783121_10786563_10786707_10793719_10793856_10795371_10795440_10797379_10797519_10798485_10798573_10802287_10802359_10805915_10805968_10812263_10812378_10819979_10820090_10823787_10823900_10825056_10825222_10829035_10829269_10830126_10830379_10830980
H1_mix_00043047	chr19	+	3687	20	FSM	ENSG00000079805.19	ENST00000359692.10	3588	20	-109	10	-71	0	multi-exon	FALSE	canonical	0	0	junction_9	274.150331811094	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTAAAATAAAGGGAAGACG	10	False	NA	-5	True	NA	NA	NA	10717983	10831874	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10718404_10759737_10759812_10772478_10772629_10775702_10775907_10777117_10777217_10782959_10783121_10786563_10786707_10793719_10793856_10795371_10795440_10796060_10796200_10798485_10798573_10802287_10802359_10805915_10805968_10812263_10812378_10819979_10820090_10823787_10823900_10825056_10825222_10829035_10829269_10830126_10830379_10830977
H1_mix_00043051	chr19	+	6574	7	FSM	ENSG00000079805.19	ENST00000590806.5	5651	7	-946	23	-946	0	multi-exon	FALSE	canonical	3	623	junction_6	105.558304057784	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTAAAATAAAGGGAAGACG	9647	False	NA	-5	True	NA	NA	NA	10807572	10831874	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10812378_10819979_10820090_10823787_10823900_10825056_10825222_10829035_10829269_10830126_10830379_10830977
H1_mix_00043052	chr19	+	324	1	FSM	ENSG00000267544.1	ENST00000590455.1	412	1	46	42	46	-42	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGTGATGACTACCACAG	5201	False	NA	NA	False	NA	NA	NA	10841884	10842208	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10841900_10842200
H1_mix_00043054	chr19	+	2722	15	FSM	ENSG00000142453.12	ENST00000344150.8	2722	15	0	0	0	0	multi-exon	TRUE	canonical	3	401	junction_14	309.447112292428	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAGAAAAAG	21	False	NA	31	True	NA	NA	NA	10871702	10922721	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10871923_10904950_10905077_10908038_10908146_10909102_10909208_10912183_10912295_10913876_10914055_10916406_10916498_10916695_10916778_10919594_10919681_10919876_10919967_10920435_10920574_10920658_10920749_10920833_10920947_10921049_10921128_10921614
H1_mix_00043057	chr19	+	794	2	FSM	ENSG00000142444.7	ENST00000593162.1	368	2	-428	2	-428	-2	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTTGTTTGTGATACTT	2793	False	NA	4	True	AATAAA	-19	NA	10931639	10933533	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10932261_10933360
H1_mix_00043060	chr19	+	5661	34	NIC	ENSG00000127616.20	novel	5554	34	NA	NA	-103	0	combination_of_known_junctions	FALSE	canonical	3	680	junction_29	187.759091881118	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACCAACAACAAAACGCAC	NA	False	NA	2	True	AATAAA	-3	NA	10960828	11062258	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_10961175_10984120_10984374_10985272_10985406_10986188_10986594_10986904_10987004_10987665_10987925_10989316_10989444_10991149_10991324_10994827_10995002_10996212_10996381_10996493_10996545_11003028_11003160_11003339_11003398_11007901_11008024_11010380_11010532_11012948_11013113_11018956_11019024_11019590_11019702_11021724_11021968_11023517_11023632_11024330_11024439_11025421_11025509_11026299_11026347_11027783_11027951_11030729_11030894_11033289_11033518_11034122_11034201_11034913_11035133_11041306_11041561_11058257_11058364_11058787_11058890_11059752_11059886_11060044_11060188_11061783
H1_mix_00043061	chr19	+	5579	34	FSM	ENSG00000127616.20	ENST00000646484.1	5579	34	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_1	209.744906064092	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGCCTGCAGGTGGACT	22	True	NA	23	True	AATAAA	-24	NA	10960931	11062279	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10961175_10984123_10984374_10985272_10985406_10986188_10986594_10986904_10987004_10987665_10987925_10989316_10989444_10991149_10991324_10994827_10995002_10996212_10996381_10996493_10996545_11003028_11003160_11003339_11003398_11007901_11008024_11010380_11010532_11012948_11013113_11018956_11019024_11019590_11019702_11021724_11021968_11023517_11023632_11024330_11024439_11025421_11025509_11026299_11026347_11027783_11027951_11030729_11030894_11033289_11033518_11034122_11034201_11034913_11035133_11041306_11041561_11058254_11058364_11058787_11058890_11059752_11059886_11060044_11060188_11061783
H1_mix_00043062	chr19	+	5675	35	FSM	ENSG00000127616.20	ENST00000642726.1	5675	35	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_29	340.96008985213	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGCCTGCAGGTGGACT	22	True	NA	23	True	AATAAA	-24	NA	10960931	11062279	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10961175_10984123_10984374_10985272_10985406_10986188_10986594_10986904_10987004_10987665_10987925_10989316_10989444_10991149_10991324_10994827_10995002_10996212_10996381_10996493_10996545_11003028_11003160_11003339_11003398_11007901_11008024_11010380_11010532_11012948_11013113_11018956_11019024_11019590_11019702_11021724_11021968_11023517_11023632_11024330_11024439_11025421_11025509_11026299_11026347_11027783_11027951_11030729_11030894_11033289_11033518_11034122_11034201_11034913_11035133_11039457_11039554_11041306_11041561_11058254_11058364_11058787_11058890_11059752_11059886_11060044_11060188_11061783
H1_mix_00043063	chr19	+	5637	35	FSM	ENSG00000127616.20	ENST00000642628.1	5637	35	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_29	319.895956539592	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAACAAAACGCACAGCCT	-5	True	NA	7	True	AATAAA	-8	NA	10960956	11062263	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10961175_10984120_10984374_10985272_10985406_10986188_10986594_10986904_10987004_10987665_10987925_10989316_10989444_10991149_10991324_10994827_10995002_10996212_10996381_10996493_10996545_11003028_11003160_11003339_11003398_11007901_11008024_11010380_11010532_11012948_11013113_11018956_11019024_11019590_11019702_11021724_11021968_11023517_11023632_11024330_11024439_11025421_11025509_11026299_11026347_11027783_11027951_11030729_11030894_11033289_11033518_11034122_11034201_11034913_11035133_11039457_11039554_11041306_11041561_11058254_11058364_11058787_11058890_11059752_11059886_11060044_11060188_11061783
H1_mix_00043065	chr19	+	5674	36	FSM	ENSG00000127616.20	ENST00000429416.8	5665	36	-9	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	411.150405966637	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAACCAACAACAAAACGC	0	True	NA	0	True	AATAAA	-1	NA	10960991	11062256	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10961175_10980776_10980853_10984120_10984374_10985272_10985406_10986188_10986594_10986904_10987004_10987665_10987925_10989316_10989444_10991149_10991324_10994827_10995002_10996212_10996381_10996493_10996545_11003028_11003160_11003339_11003398_11007901_11008024_11010380_11010532_11012948_11013113_11018956_11019024_11019590_11019702_11021724_11021968_11023517_11023632_11024330_11024439_11025421_11025509_11026299_11026347_11027783_11027951_11030729_11030894_11033289_11033518_11033766_11033866_11034122_11034201_11034913_11035133_11041306_11041561_11058254_11058364_11058787_11058890_11059752_11059886_11060044_11060188_11061783
H1_mix_00043066	chr19	+	5595	35	FSM	ENSG00000127616.20	ENST00000646510.1	5595	35	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	329.256518039173	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCTTGCCTGCAGGTGG	0	True	NA	20	True	AATAAA	-21	NA	10960991	11062276	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10961175_10980776_10980853_10984120_10984374_10985272_10985406_10986188_10986594_10986904_10987004_10987665_10987925_10989316_10989444_10991149_10991324_10994827_10995002_10996212_10996381_10996493_10996545_11003028_11003160_11003339_11003398_11007901_11008024_11010380_11010532_11012948_11013113_11018956_11019024_11019590_11019702_11021724_11021968_11023517_11023632_11024330_11024439_11025421_11025509_11026299_11026347_11027783_11027951_11030729_11030894_11033289_11033518_11034122_11034201_11034913_11035133_11041306_11041561_11058254_11058364_11058787_11058890_11059752_11059886_11060044_11060188_11061783
H1_mix_00043067	chr19	+	5610	34	NNC	ENSG00000127616.20	novel	5554	34	NA	NA	-38	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	286.924408445179	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGCCTTGCCTGCAGGTG	-16	True	NA	19	True	AATAAA	-20	NA	10960893	11062275	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_10961175_10984120_10984374_10985272_10985406_10986188_10986594_10986904_10987004_10987665_10987925_10989316_10989444_10991149_10991324_10994827_10995002_10996212_10996381_10996493_10996545_11003028_11003160_11003339_11003398_11007904_11008024_11010380_11010532_11012948_11013113_11018956_11019024_11019590_11019702_11021724_11021968_11023517_11023632_11024330_11024439_11025421_11025509_11026299_11026347_11027783_11027951_11030729_11030894_11033289_11033518_11034122_11034201_11034913_11035133_11041306_11041561_11058257_11058364_11058787_11058890_11059752_11059886_11060044_11060188_11061783
H1_mix_00043068	chr19	+	5509	34	NNC	ENSG00000127616.20	novel	5577	35	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	275.226461559081	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCACAGCCTTGCCTGCAGG	4	True	NA	17	True	AATAAA	-18	NA	10960995	11062273	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_10961175_10984120_10984374_10985272_10985406_10986188_10986594_10986904_10987004_10987665_10987925_10989316_10989444_10991149_10991324_10994827_10995002_10996212_10996381_10996493_10996545_11003028_11003160_11003339_11003398_11007904_11008024_11010380_11010532_11012948_11013113_11018956_11019024_11019590_11019702_11021724_11021968_11023517_11023632_11024330_11024439_11025421_11025509_11026299_11026347_11027783_11027951_11030729_11030894_11033289_11033518_11034122_11034201_11034913_11035133_11041306_11041561_11058254_11058364_11058787_11058890_11059752_11059886_11060044_11060188_11061783
H1_mix_00043069	chr19	+	5470	34	FSM	ENSG00000127616.20	ENST00000645460.1	5457	34	-13	0	0	0	multi-exon	FALSE	canonical	3	411	junction_1	225.685015795142	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGCACAGCCTTGCCTGCA	-36	True	NA	15	True	AATAAA	-16	NA	10961029	11062271	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10961175_10984123_10984374_10985272_10985406_10986188_10986594_10986904_10987004_10987665_10987925_10989316_10989444_10991149_10991324_10994827_10995002_10996212_10996381_10996493_10996545_11003028_11003160_11003339_11003398_11007901_11008024_11010380_11010532_11012948_11013113_11018956_11019024_11019590_11019702_11021724_11021968_11023517_11023632_11024330_11024439_11025421_11025509_11026299_11026347_11027783_11027951_11030729_11030894_11033289_11033518_11034122_11034201_11034913_11035133_11041306_11041561_11058257_11058364_11058787_11058890_11059752_11059886_11060044_11060188_11061783
H1_mix_00043070	chr19	+	5673	36	FSM	ENSG00000127616.20	ENST00000646693.2	5670	36	0	-3	0	0	multi-exon	FALSE	canonical	3	43	junction_30	418.046746726942	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCTTGCCTGCAGGTGG	-36	True	NA	20	True	AATAAA	-21	NA	10961029	11062276	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10961175_10984123_10984374_10985272_10985406_10986188_10986594_10986904_10987004_10987665_10987925_10989316_10989444_10991149_10991324_10994827_10995002_10996212_10996381_10996493_10996545_11003028_11003160_11003339_11003398_11007901_11008024_11010380_11010532_11012948_11013113_11018956_11019024_11019590_11019702_11021724_11021968_11023517_11023632_11024330_11024439_11025421_11025509_11026299_11026347_11027783_11027951_11030729_11030894_11033289_11033518_11033766_11033866_11034122_11034201_11034913_11035133_11039457_11039554_11041306_11041561_11058254_11058364_11058787_11058890_11059752_11059886_11060044_11060188_11061783
H1_mix_00043071	chr19	+	5580	35	FSM	ENSG00000127616.20	ENST00000344626.10	5577	35	0	-3	0	0	multi-exon	FALSE	canonical	3	117	junction_26	316.845661182824	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCTTGCCTGCAGGTGG	-36	True	NA	20	True	AATAAA	-21	NA	10961029	11062276	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10961175_10984120_10984374_10985272_10985406_10986188_10986594_10986904_10987004_10987665_10987925_10989316_10989444_10991149_10991324_10994827_10995002_10996212_10996381_10996493_10996545_11003028_11003160_11003339_11003398_11007901_11008024_11010380_11010532_11012948_11013113_11018956_11019024_11019590_11019702_11021724_11021968_11023517_11023632_11024330_11024439_11025421_11025509_11026299_11026347_11027783_11027951_11030729_11030894_11033289_11033518_11033766_11033866_11034122_11034201_11034913_11035133_11041306_11041561_11058254_11058364_11058787_11058890_11059752_11059886_11060044_11060188_11061783
H1_mix_00043072	chr19	+	5458	34	NNC	ENSG00000127616.20	novel	5579	34	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	301.252384358575	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGCACAGCCTTGCCTGCA	-24	True	NA	15	True	AATAAA	-16	NA	10961041	11062271	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_10961175_10984123_10984374_10985272_10985406_10986188_10986594_10986904_10987004_10987665_10987925_10989316_10989444_10991149_10991324_10994827_10995002_10996212_10996381_10996493_10996545_11003028_11003160_11003339_11003398_11007904_11008024_11010380_11010532_11012948_11013113_11018956_11019024_11019590_11019702_11021724_11021968_11023517_11023632_11024330_11024439_11025421_11025509_11026299_11026347_11027783_11027951_11030729_11030894_11033289_11033518_11034122_11034201_11034913_11035133_11041306_11041561_11058254_11058364_11058787_11058890_11059752_11059886_11060044_11060188_11061783
H1_mix_00043073	chr19	+	5186	33	NIC	ENSG00000127616.20	novel	5579	34	NA	NA	15	-4	combination_of_known_junctions	FALSE	canonical	3	175	junction_30	274.376364959589	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGTTTGGAGTCACTGTA	-8	True	NA	NA	False	NA	NA	NA	10961057	11062114	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_10961175_10984123_10984374_10985272_10985406_10986188_10986594_10986904_10987004_10987665_10987925_10989316_10989444_10991149_10991324_10994827_10995002_10996212_10996381_10996493_10996545_11003028_11003160_11003339_11003398_11007901_11008024_11010380_11010532_11012948_11013113_11018956_11019024_11019590_11019702_11021724_11021968_11023517_11023632_11024330_11024439_11025421_11025509_11026299_11026347_11027783_11027951_11030729_11030894_11033289_11033518_11034122_11034201_11034913_11035133_11041306_11041561_11058254_11058364_11059752_11059886_11060044_11060188_11061783
H1_mix_00043075	chr19	+	5759	34	FSM	ENSG00000127616.20	ENST00000590574.6	5739	34	-20	0	-20	0	multi-exon	FALSE	canonical	3	40	junction_1	259.163937962303	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCACAGCCTTGCCTGCAGG	-11	True	NA	17	True	AATAAA	-18	NA	10961300	11062273	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10961730_10984123_10984374_10985272_10985406_10986188_10986594_10986904_10987004_10987665_10987925_10989316_10989444_10991149_10991324_10994827_10995002_10996212_10996381_10996493_10996545_11003028_11003160_11003339_11003398_11007901_11008024_11010380_11010532_11012948_11013113_11018956_11019024_11019590_11019702_11021724_11021968_11023517_11023632_11024330_11024439_11025421_11025509_11026299_11026347_11027783_11027951_11030729_11030894_11033289_11033518_11034122_11034201_11034913_11035133_11041306_11041561_11058254_11058364_11058787_11058890_11059752_11059886_11060044_11060188_11061783
H1_mix_00043076	chr19	+	3940	27	FSM	ENSG00000127616.20	ENST00000643208.1	3940	27	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_18	361.027414996006	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACCAACAACAAAACGCAC	3572	False	NA	2	True	AATAAA	-3	NA	10994851	11062258	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10995002_10996212_10996381_10996493_10996545_11003028_11003160_11003339_11003398_11007901_11008024_11010380_11010532_11012948_11013113_11018956_11019024_11019590_11019702_11021724_11021968_11023517_11023632_11024330_11024439_11025421_11025509_11026299_11026347_11027783_11027951_11030729_11030894_11033289_11033518_11033766_11033866_11034122_11034201_11034913_11035133_11041306_11041561_11058257_11058364_11058787_11058890_11059752_11059886_11060044_11060188_11061783
H1_mix_00043080	chr19	+	1875	6	FSM	ENSG00000127616.20	ENST00000643929.1	1865	6	-10	0	0	0	multi-exon	FALSE	canonical	3	680	junction_1	355.777683392312	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGTAATAAATTAAACCAACA	NA	False	NA	-9	True	NA	NA	NA	11040633	11062247	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11041561_11058257_11058364_11058787_11058890_11059752_11059886_11060044_11060188_11061783
H1_mix_00043083	chr19	+	5173	18	FSM	ENSG00000130164.14	ENST00000558518.6	5173	18	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_4	36.0341053365398	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTCTAAACTCGATGCAC	0	True	NA	19	True	ATTAAA	-18	NA	11089462	11133820	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11089616_11100222_11100346_11102663_11102787_11105219_11105601_11106564_11106688_11107391_11107515_11110651_11110772_11111513_11111640_11113277_11113450_11113534_11113763_11116093_11116213_11116858_11116999_11120091_11120234_11120369_11120523_11123173_11123345_11128007_11128086_11129512_11129671_11131280
H1_mix_00043085	chr19	+	657	7	FSM	ENSG00000183401.12	ENST00000590054.5	1016	7	-7	366	5	160	multi-exon	FALSE	canonical	2	4	junction_1	9.48243991104962	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGGAGGAGATGGGGA	0	True	NA	NA	False	NA	NA	NA	11346523	11352133	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11346635_11349653_11349688_11349937_11350027_11350117_11350200_11350807_11351004_11351905_11351974_11352056
H1_mix_00043086	chr19	+	1049	11	FSM	ENSG00000183401.12	ENST00000458408.6	1049	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	6.4621977685614	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGACTGTTAGTCTTGC	-5	True	NA	8	True	AATAAA	-21	NA	11346518	11354944	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11346628_11349653_11349688_11349937_11350027_11350117_11350200_11350807_11351004_11351905_11351974_11352056_11352134_11353450_11353573_11353791_11353875_11354579_11354697_11354872
H1_mix_00043087	chr19	+	658	5	FSM	ENSG00000183401.12	ENST00000591691.1	658	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	6.57647321898295	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCGACTGTTAGTCTTG	3177	False	NA	7	True	AATAAA	-20	NA	11351961	11354943	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11351974_11352056_11352134_11353450_11353573_11353791_11353875_11354579
H1_mix_00043089	chr19	+	2552	10	FSM	ENSG00000105520.11	ENST00000591608.2	2556	10	0	4	0	-4	multi-exon	FALSE	canonical	3	7	junction_3	20.9926500953236	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGTTTGGCCATCTGCCT	0	True	NA	22	True	AATAAA	-40	NA	11355497	11365694	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11355573_11356801_11356977_11357659_11357740_11359606_11359721_11359820_11359957_11361216_11361489_11362512_11362690_11363712_11363836_11364160_11364213_11364346
H1_mix_00043090	chr19	+	323	2	FSM	ENSG00000105520.11	ENST00000588196.1	407	2	0	84	0	-28	multi-exon	FALSE	canonical	3	58	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCACAGATCCTGCTGG	2198	False	NA	NA	False	NA	NA	NA	11357695	11359810	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11357740_11359531
H1_mix_00043094	chr19	+	2199	19	NIC	ENSG00000130175.10	novel	2096	18	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_1	284.920066763372	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAATAAATGTGATCCCC	-2	True	NA	0	True	NA	NA	NA	11435281	11450940	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_11435444_11435644_11435707_11436040_11436197_11436388_11436506_11437875_11437972_11438066_11438125_11441239_11441358_11442385_11442516_11445388_11445474_11446271_11446351_11447073_11447161_11447438_11447598_11447692_11447790_11448221_11448292_11448539_11448630_11448913_11448989_11449075_11449176_11449265_11449429_11450645
H1_mix_00043096	chr19	+	2074	18	FSM	ENSG00000130175.10	ENST00000591462.6	2063	18	-11	0	0	0	multi-exon	FALSE	canonical	3	182	junction_11	236.682331304128	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTGTCTGTGTCTGCCT	-20	True	NA	25	True	AATAAA	-16	NA	11435623	11450965	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11435707_11436040_11436197_11436388_11436506_11437875_11437972_11438066_11438125_11441239_11441358_11442385_11442516_11445388_11445474_11446271_11446351_11447073_11447161_11447438_11447619_11447722_11447790_11448221_11448292_11448539_11448630_11448913_11448989_11449075_11449176_11449265_11449429_11450645
H1_mix_00043097	chr19	+	2079	18	NIC	ENSG00000130175.10	novel	2100	18	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	113	junction_1	280.785970528577	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAATAAATGTGATCCCC	204	False	NA	0	True	NA	NA	NA	11435606	11450940	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_11435711_11436040_11436197_11436388_11436506_11437875_11437972_11438066_11438125_11441239_11441358_11442385_11442516_11445388_11445474_11446271_11446351_11447073_11447161_11447438_11447598_11447692_11447790_11448221_11448292_11448539_11448630_11448913_11448989_11449075_11449176_11449265_11449429_11450645
H1_mix_00043098	chr19	+	2111	18	FSM	ENSG00000130175.10	ENST00000592741.5	2100	18	-11	0	0	0	multi-exon	TRUE	canonical	3	113	junction_1	303.331285086307	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTCTGTGTCTGCCTCGC	-20	True	NA	28	True	AATAAA	-19	NA	11435623	11450968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11435711_11436040_11436197_11436388_11436506_11437875_11437972_11438066_11438125_11441239_11441358_11442385_11442516_11445388_11445474_11446271_11446351_11447073_11447161_11447438_11447619_11447692_11447790_11448221_11448292_11448539_11448630_11448913_11448989_11449075_11449176_11449265_11449429_11450645
H1_mix_00043099	chr19	+	2107	18	FSM	ENSG00000130175.10	ENST00000677123.1	2096	18	-11	0	0	0	multi-exon	FALSE	canonical	3	348	junction_11	200.409805063021	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTCTGTGTCTGCCTCGC	-20	True	NA	28	True	AATAAA	-19	NA	11435623	11450968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11435707_11436040_11436197_11436388_11436506_11437875_11437972_11438066_11438125_11441239_11441358_11442385_11442516_11445388_11445474_11446271_11446351_11447073_11447161_11447438_11447619_11447692_11447790_11448221_11448292_11448539_11448630_11448913_11448989_11449075_11449176_11449265_11449429_11450645
H1_mix_00043100	chr19	+	2074	18	NIC	ENSG00000130175.10	novel	2096	18	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	536	junction_11	160.913030734641	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTGTCTGTGTCTGCCT	-11	True	NA	25	True	AATAAA	-16	NA	11435632	11450965	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_11435707_11436040_11436197_11436388_11436506_11437875_11437972_11438066_11438125_11441239_11441358_11442385_11442516_11445388_11445474_11446271_11446351_11447073_11447161_11447438_11447598_11447692_11447790_11448221_11448292_11448539_11448630_11448913_11448989_11449075_11449176_11449265_11449429_11450645
H1_mix_00043104	chr19	+	2157	7	ISM	ENSG00000130175.10	ENST00000586486.1	1613	8	2	0	2	0	intron_retention	FALSE	canonical	3	182	junction_1	344.146972802157	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTCTGTGTCTGCCTCGC	477	False	NA	28	True	AATAAA	-19	NA	11447566	11450968	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_11447619_11447722_11447790_11448221_11448292_11448539_11448630_11448913_11448989_11449075_11449176_11449265
H1_mix_00043105	chr19	+	2160	7	ISM	ENSG00000130175.10	ENST00000589838.5	1898	17	11455	-28	8	0	intron_retention	FALSE	canonical	3	536	junction_1	216.267902277605	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTCTGTGTCTGCCTCGC	483	False	NA	28	True	AATAAA	-19	NA	11447572	11450968	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_11447598_11447692_11447790_11448221_11448292_11448539_11448630_11448913_11448989_11449075_11449176_11449265
H1_mix_00043109	chr19	+	396	1	FSM	ENSG00000213303.3	ENST00000463278.1	396	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACATAAATCTTTGGCTCA	45	False	NA	NA	False	AAGAAA	-4	NA	11523435	11523831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11523400_11523800
H1_mix_00043111	chr19	+	2803	4	FSM	ENSG00000198551.10	ENST00000361113.10	2803	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	4.54606056566195	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGTGCTCAGAAGAATTT	13	True	NA	40	True	CATAAA	-23	NA	11597482	11619161	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11597631_11614526_11614654_11614826_11614888_11616694
H1_mix_00043113	chr19	+	4599	4	FSM	ENSG00000171295.13	ENST00000304060.10	4215	4	13	-397	-1	397	multi-exon	FALSE	canonical	3	10	junction_1	0.471404520791032	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGCCTGTCTTATATTTC	8	True	NA	NA	False	AATAAA	-21	NA	11814285	11835613	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11814451_11830282_11830410_11830616_11830678_11831367
H1_mix_00043114	chr19	+	2433	4	FSM	ENSG00000198429.10	ENST00000429654.7	2441	4	8	0	8	0	multi-exon	FALSE	canonical	2	5	junction_1	4.98887651569859	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAGATAAAACCACAAAGAT	-12	True	NA	NA	False	NA	NA	NA	11887789	11906696	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11887987_11903572_11903700_11903904_11903966_11904648
H1_mix_00043115	chr19	+	1665	5	FSM	ENSG00000198429.10	ENST00000340180.5	1438	5	0	-227	0	227	multi-exon	FALSE	canonical	1	2	junction_4	5.71729831301464	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTCTTTCTCTGATAAT	53	False	NA	11	True	AATAAA	-25	NA	11887854	11914556	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11887987_11903614_11903700_11903904_11903966_11904648_11904888_11913408
H1_mix_00043116	chr19	+	2875	4	FSM	ENSG00000196757.8	ENST00000254321.10	2843	4	-32	0	7	0	multi-exon	FALSE	canonical	3	24	junction_1	3.68178700572909	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAAGCTTATAATGTTAC	-1	True	NA	23	True	AATAAA	-25	NA	11925074	11950763	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11925274_11947180_11947308_11947513_11947575_11948275
H1_mix_00043118	chr19	+	2853	4	FSM	ENSG00000197054.12	ENST00000358987.8	2862	4	9	0	-5	0	multi-exon	FALSE	canonical	2	7	junction_3	1.24721912892465	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCTAAATACAGCCTTTT	1	True	NA	NA	False	AATAAA	-19	NA	11965048	11980617	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11965212_11977037_11977165_11977370_11977432_11978115
H1_mix_00043119	chr19	+	1244	3	FSM	ENSG00000219665.8	ENST00000406892.6	1257	3	13	0	13	0	multi-exon	FALSE	canonical	1	1	junction_2	59.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGGCTCTGTGATTTCA	13	False	NA	NA	False	ATTAAA	-15	NA	11987629	12027194	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11987824_12001773_12001823_12026193
H1_mix_00043121	chr19	+	430	3	FSM	ENSG00000219665.8	ENST00000591838.5	430	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGTTTCTTATGCTTGC	NA	False	NA	NA	False	AATAAA	-14	NA	12034575	12046275	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12034593_12035553_12035773_12046081
H1_mix_00043122	chr19	+	3778	3	NIC	ENSG00000214189.9	novel	1994	4	NA	NA	-10	1630	combination_of_known_junctions	FALSE	canonical	3	92	junction_2	22.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGGAATTTTGAGTGTTT	NA	False	NA	-43	True	AAAAAG	-15	NA	12092252	12114678	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_12092471_12110304_12110432_12111245
H1_mix_00043126	chr19	+	3625	4	FSM	ENSG00000196646.12	ENST00000343979.6	3601	4	-17	-7	9	7	multi-exon	FALSE	canonical	3	24	junction_3	8.2192186706253	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGGATTGTGTCATGTC	-7	True	NA	10	True	AATAAA	-21	NA	12163078	12189878	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12163207_12185784_12185912_12186113_12186175_12186569
H1_mix_00043132	chr19	+	1275	7	FSM	ENSG00000198356.12	ENST00000357332.8	1275	7	0	0	0	0	multi-exon	FALSE	canonical	1	456	junction_4	275.050096447094	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTGACATTGGGAG	2	True	NA	27	True	AATAAA	-16	NA	12737496	12748323	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12737667_12738510_12738659_12745376_12745526_12745608_12745760_12747196_12747305_12747394_12747593_12747972
H1_mix_00043140	chr19	+	4853	26	FSM	ENSG00000105613.10	ENST00000251472.9	4853	26	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_14	13.9771241677249	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTGGGGCTCACTCCT	18	True	NA	27	True	AATAAA	-20	NA	12838514	12874952	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12838656_12840445_12840535_12840990_12841067_12843528_12843608_12847289_12847451_12847611_12847688_12847847_12848058_12851933_12852036_12852114_12852248_12852327_12852396_12858361_12858442_12858530_12858740_12864808_12864948_12865045_12865179_12865315_12865482_12865716_12865819_12865979_12866103_12866652_12866763_12867473_12867653_12867729_12867978_12868642_12868850_12869065_12869296_12870823_12870947_12871035_12871173_12873323_12873512_12873608
H1_mix_00043141	chr19	+	1408	11	FSM	ENSG00000105613.10	ENST00000588379.5	1408	11	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_9	9.42549733435854	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTATTTGTTTTTCAT	2006	False	NA	23	True	NA	NA	NA	12840502	12858921	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12840535_12840990_12841067_12843528_12843608_12847289_12847451_12847611_12847688_12847847_12848058_12851933_12852036_12852114_12852248_12852327_12852396_12858361_12858442_12858530
H1_mix_00043142	chr19	+	398	3	FSM	ENSG00000105613.10	ENST00000590204.1	398	3	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	5.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGCCACCTTGTGAAGAC	9322	False	NA	NA	False	NA	NA	NA	12847818	12852171	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12848058_12851933_12852036_12852114
H1_mix_00043147	chr19	+	1877	11	FSM	ENSG00000105607.13	ENST00000591470.5	1867	11	-10	0	-10	0	multi-exon	FALSE	canonical	3	397	junction_1	46.2783966878715	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAGACCTGCACATC	NA	False	NA	-17	True	NA	NA	NA	12891149	12899946	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12891396_12891486_12891523_12891830_12891975_12892115_12892179_12893482_12893654_12895991_12896122_12896204_12896422_12896909_12897014_12897302_12897429_12897702_12897864_12899467
H1_mix_00043148	chr19	+	1764	10	FSM	ENSG00000105607.13	ENST00000591043.1	1764	10	0	0	0	0	multi-exon	FALSE	canonical	3	397	junction_1	45.8887543716081	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAAATTTCCCTTCTGAA	99	False	NA	-6	True	TTTAAA	-2	NA	12891268	12899678	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12891396_12891486_12891523_12891830_12891975_12892115_12892179_12893482_12893654_12895991_12896122_12896204_12896422_12896909_12897014_12897302_12897864_12899467
H1_mix_00043156	chr19	+	4868	7	NIC	ENSG00000160877.6	novel	4524	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	6	junction_1	55.7135531087365	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCGCATGCTCGTTACT	16	True	NA	16	True	AATAAA	-21	NA	13116861	13141147	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_13116936_13117993_13118455_13135199_13136154_13136231_13136406_13137270_13137377_13137477_13137576_13138146
H1_mix_00043158	chr19	+	2110	2	FSM	ENSG00000160888.7	ENST00000292433.4	2110	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTGTCTGGTTTTCTGC	-44	True	NA	7	True	AATAAA	-22	NA	13150410	13154911	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_13150553_13152943
H1_mix_00043159	chr19	+	2937	1	FSM	ENSG00000160888.7	ENST00000588173.1	2934	1	0	-3	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	180	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTGTCTGGTTTTCTGC	1445	False	NA	7	True	AATAAA	-22	NA	13151974	13154911	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_13152000_13154900
H1_mix_00043162	chr19	+	1795	9	FSM	ENSG00000104957.14	ENST00000593174.5	1783	9	-12	0	-12	0	multi-exon	FALSE	canonical	3	62	junction_1	17.1373130916139	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTCTTCTTCCCTGTCT	-5	True	NA	4	True	ATTAAA	-4	NA	13747851	13763279	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_13747955_13751607_13751812_13754288_13754343_13756196_13756280_13757417_13757474_13757785_13757847_13758867_13759273_13762298_13762438_13762589
H1_mix_00043163	chr19	+	1678	10	FSM	ENSG00000104957.14	ENST00000221554.13	1673	10	-5	0	-5	0	multi-exon	FALSE	canonical	3	62	junction_1	20.2325980707214	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGTCTTGGGTTGTTA	-24	True	NA	14	True	ATTAAA	-14	NA	13747889	13763289	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_13747955_13751607_13751812_13754288_13754343_13756196_13756280_13757417_13757474_13757785_13757847_13758867_13759011_13759099_13759273_13762298_13762438_13762589
H1_mix_00043166	chr19	+	1249	3	FSM	ENSG00000104957.14	ENST00000589669.1	701	3	-590	42	-590	0	multi-exon	FALSE	canonical	3	16	junction_1	42.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAGGGAGCCGTCAGGAC	NA	False	NA	NA	False	NA	NA	NA	13760800	13762931	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_13761569_13762298_13762438_13762589
H1_mix_00043169	chr19	+	3183	6	FSM	ENSG00000037757.14	ENST00000040663.8	3178	6	-5	0	-5	0	multi-exon	FALSE	canonical	3	34	junction_5	7.61577310586391	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTTTGTTCGTAATGTTT	-20	True	NA	23	True	AATAAA	-20	NA	13764516	13774282	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_13764721_13764870_13765110_13765953_13766130_13768560_13768738_13768823_13769049_13772120
H1_mix_00043170	chr19	+	855	2	FSM	ENSG00000104979.9	ENST00000221576.4	504	2	-48	-303	-25	-11	multi-exon	FALSE	canonical	3	72	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTCAGAAACCACGTGGT	9894	False	NA	NA	False	ATTAAA	-8	NA	13774430	13778762	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_13774575_13778051
H1_mix_00043172	chr19	+	512	2	FSM	ENSG00000104979.9	ENST00000593274.1	491	2	-21	0	-21	0	multi-exon	FALSE	canonical	3	118	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGCAGTCCTGTGTTCG	-26	True	NA	17	True	AATAAA	-17	NA	13774802	13778462	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_13774904_13778051
H1_mix_00043173	chr19	+	4747	14	FSM	ENSG00000132003.10	ENST00000590508.6	4731	14	-40	24	-40	0	multi-exon	FALSE	canonical	3	73	junction_7	14.4304083930612	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-9	True	NA	119	True	NA	NA	NA	13795402	13832230	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_13795802_13799719_13799922_13804791_13805149_13808835_13808985_13809069_13809221_13812996_13813165_13814514_13814866_13817215_13817354_13817721_13817977_13819356_13819493_13823345_13823501_13825549_13825714_13828644_13828727_13830190
H1_mix_00043174	chr19	+	4339	13	FSM	ENSG00000132003.10	ENST00000254323.6	4339	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	28.7878977272665	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	14	False	NA	119	True	NA	NA	NA	13795459	13832230	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_13795802_13799719_13799922_13804791_13805149_13808835_13808985_13809069_13809221_13812996_13813165_13817215_13817354_13817721_13817977_13819356_13819493_13823345_13823501_13825549_13825714_13828644_13828727_13830190
H1_mix_00043176	chr19	+	3562	29	NIC	ENSG00000132024.18	novel	3581	29	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	54	junction_12	41.7279056776745	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCAGCCCAGCTCTGTCCT	-11	True	NA	3	True	AATAAA	-15	NA	13906202	13930874	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_13906502_13909822_13909959_13912322_13912439_13912527_13912594_13913167_13913303_13913403_13913639_13918069_13918195_13918503_13918577_13918745_13918818_13918911_13919043_13919129_13919203_13919817_13919940_13920556_13920669_13920749_13920923_13923332_13923456_13923547_13923607_13923694_13923812_13926516_13926591_13926666_13926726_13926820_13926873_13926977_13927078_13927174_13927266_13927892_13928031_13928123_13928189_13929378_13929443_13929533_13929661_13930077_13930155_13930241_13930290_13930374
H1_mix_00043180	chr19	+	2761	16	FSM	ENSG00000132024.18	ENST00000679637.1	2759	16	-2	0	0	0	multi-exon	FALSE	canonical	3	203	junction_9	23.299403902723	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCAGCCCAGCTCTGTCCT	NA	False	NA	3	True	AATAAA	-15	NA	13920401	13930874	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_13920669_13920749_13920923_13923332_13923456_13923547_13923607_13923694_13923812_13926516_13926591_13926666_13926726_13926820_13926873_13926977_13927078_13927174_13928031_13928123_13928189_13929378_13929443_13929533_13929661_13930077_13930155_13930241_13930290_13930374
H1_mix_00043182	chr19	+	2298	13	FSM	ENSG00000132017.11	ENST00000254337.11	2261	13	-37	0	-37	0	multi-exon	FALSE	canonical	3	303	junction_6	40.7338072803851	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGGTCCTGTCACTGCAG	-7	True	NA	16	True	AATAAA	-22	NA	13952471	13961449	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_13952645_13954339_13954438_13954525_13954662_13955911_13956019_13956122_13956263_13956351_13956523_13959044_13959480_13959581_13959674_13959766_13959896_13959983_13960070_13960286_13960392_13960464_13960581_13960939
H1_mix_00043183	chr19	+	815	3	FSM	ENSG00000132017.11	ENST00000585468.1	815	3	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_1	24.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCATCAGTTCTGTTCTTT	3900	False	NA	NA	False	NA	NA	NA	13956408	13959847	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_13956523_13959044_13959480_13959581
H1_mix_00043184	chr19	+	989	5	FSM	ENSG00000132017.11	ENST00000588523.1	989	5	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_1	35.1745646739231	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGAATGGACCCCATTCCC	442	False	NA	NA	False	NA	NA	NA	13959583	13961329	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_13959674_13959766_13959896_13959983_13960070_13960286_13960581_13960939
H1_mix_00043185	chr19	+	2950	14	FSM	ENSG00000104998.4	ENST00000263379.4	2950	14	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_6	15.1071126318369	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTAGCTTTGAGGTCTTTT	-23	True	NA	8	True	AATAAA	-21	NA	14031761	14053218	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_14031973_14032385_14032504_14039507_14039666_14039752_14039911_14042452_14042613_14042715_14042790_14046153_14046338_14046429_14046619_14048980_14049083_14049155_14049315_14050757_14050884_14051606_14051701_14051879_14051974_14052095
H1_mix_00043191	chr19	+	3140	22	FSM	ENSG00000123143.13	ENST00000242783.11	3120	22	-20	0	-20	0	multi-exon	FALSE	canonical	3	862	junction_9	92.5634427282457	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGCATCCTCCGTGTCT	11	False	NA	21	True	AAAAAG	-20	NA	14433285	14471859	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_14433543_14441142_14441444_14443469_14443622_14446425_14446562_14450317_14450464_14450895_14451110_14451828_14452024_14458030_14458141_14458231_14458376_14463666_14463743_14463827_14463970_14464059_14464154_14467564_14467642_14467717_14467794_14467875_14467968_14469340_14469518_14469751_14469815_14469911_14469989_14470162_14470306_14470574_14470683_14470770_14470852_14471580
H1_mix_00043192	chr19	+	677	3	FSM	ENSG00000123143.13	ENST00000592960.1	677	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCATCCTCCGTGTCTTCT	NA	False	NA	24	True	AAAAAG	-23	NA	14470781	14471862	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_14470852_14471101_14471427_14471580
H1_mix_00043193	chr19	+	366	1	FSM	ENSG00000224543.4	ENST00000600149.1	222	1	2	-146	2	146	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGATGTTCTGAATATACA	NA	False	NA	NA	False	AATAAA	-27	NA	14489389	14489755	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_14489400_14489800
H1_mix_00043194	chr19	+	1170	13	FSM	ENSG00000099797.15	ENST00000642961.1	1170	13	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_2	378.320658745109	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTCGGGCTCTGTGTGTT	-3	True	NA	-1	True	AATAAA	-18	NA	14529591	14565977	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_14529712_14562524_14562576_14563173_14563258_14563657_14563703_14563799_14563904_14563981_14564098_14564181_14564288_14564785_14564859_14564948_14564993_14565065_14565124_14565201_14565291_14565617_14565664_14565743
H1_mix_00043196	chr19	+	1206	13	FSM	ENSG00000099797.15	ENST00000600083.5	1204	13	-2	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	409.074590794067	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGGCTCTGTGTGTTTCT	-3	True	NA	2	True	AATAAA	-21	NA	14529591	14565980	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_14529712_14562524_14562576_14563140_14563258_14563657_14563703_14563799_14563904_14563981_14564098_14564181_14564288_14564785_14564859_14564948_14564993_14565065_14565124_14565201_14565291_14565617_14565664_14565743
H1_mix_00043199	chr19	+	771	8	NNC	ENSG00000160961.12	novel	1129	10	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	17.4671703723393	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCCCAGTCTCAGGTAGT	-14	True	NA	NA	False	ATTAAA	-17	NA	14690057	14709249	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_14690151_14693450_14693495_14695009_14695134_14695565_14695662_14699198_14699282_14705053_14705171_14706685_14706774_14709123
H1_mix_00043201	chr19	+	219	1	FSM	ENSG00000256210.3	ENST00000593748.1	216	1	-29	26	-29	-26	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTTCAGCATCCTCTTC	-5	True	NA	NA	False	NA	NA	NA	14792288	14792507	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_14792300_14792500
H1_mix_00043202	chr19	+	3294	8	FSM	ENSG00000105137.13	ENST00000342784.7	3252	8	-42	0	-42	0	multi-exon	FALSE	canonical	3	52	junction_7	16.2078338327804	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGACTGAGTACTTGGG	58	False	NA	14	True	AATAAA	-16	NA	15107358	15114974	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_15107522_15109055_15109398_15109703_15110349_15110520_15110736_15111312_15111440_15111631_15111793_15112345_15112572_15113559
H1_mix_00043203	chr19	+	2046	7	ISM	ENSG00000105137.13	ENST00000342784.7	3252	8	-56	2250	-56	-898	5prime_fragment	FALSE	canonical	3	56	junction_1	14.2243921955679	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAATCTGTCTGTTTTGTCT	44	False	NA	25	True	AGTAAA	-39	NA	15107344	15112724	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_15107522_15109055_15109398_15109703_15110349_15110520_15110736_15111312_15111440_15111631_15111793_15112345
H1_mix_00043204	chr19	+	3832	5	FSM	ENSG00000105137.13	ENST00000600252.5	3832	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_4	17.2970373185699	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGACTGAGTACTTGGG	1429	False	NA	14	True	AATAAA	-16	NA	15108832	15114974	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_15110736_15111312_15111440_15111631_15111793_15112345_15112572_15113559
H1_mix_00043208	chr19	+	2582	7	FSM	ENSG00000167460.17	ENST00000664983.1	2582	7	0	0	0	0	multi-exon	FALSE	canonical	3	2824	junction_4	123.647909628734	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATGTAATAGTATCACTT	577	False	NA	19	True	AATAAA	-30	NA	16081543	16102944	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_16082047_16086422_16086541_16088026_16088098_16089044_16089121_16093535_16093599_16093683_16093754_16101263
H1_mix_00043210	chr19	+	824	3	FSM	ENSG00000105058.12	ENST00000588367.5	798	3	-26	0	-13	0	multi-exon	FALSE	canonical	3	33	junction_2	564.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGCAACTATGCGGCCTT	NA	False	NA	NA	False	NA	NA	NA	16185396	16191448	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_16185517_16185623_16185766_16190886
H1_mix_00043211	chr19	+	1578	3	FSM	ENSG00000105058.12	ENST00000589852.5	1168	3	21	-431	-9	-1	multi-exon	FALSE	canonical	3	1033	junction_1	21	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGAGTGTCTTCTTTTT	NA	False	NA	42	True	AATAAA	-20	NA	16185400	16192045	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_16185766_16190519_16190574_16190886
H1_mix_00043213	chr19	+	401	3	FSM	ENSG00000105058.12	ENST00000587351.1	401	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	581	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACCATAAATGTGTGCAG	33	False	NA	NA	False	GATAAA	-13	NA	16185454	16186649	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_16185517_16185623_16185766_16186452
H1_mix_00043214	chr19	+	11796	12	FSM	ENSG00000072958.9	ENST00000291439.8	12859	12	-13	1076	-13	-1076	multi-exon	FALSE	canonical	3	349	junction_9	28.8610235037836	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CGTCTCAAAATAAATAAATA	44	False	NA	NA	False	NA	NA	NA	16197897	16244830	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_16198069_16203458_16203616_16206340_16206409_16208018_16208150_16209029_16209178_16226420_16226548_16227547_16227691_16228136_16228209_16228769_16228929_16233492_16233619_16234198_16234275_16234412
H1_mix_00043215	chr19	+	2192	1	FSM	ENSG00000269399.2	ENST00000595909.2	2069	1	-139	16	-139	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTCTTTAAAAATTGCCC	-9	True	NA	-7	True	AATAAA	-4	NA	16542606	16544798	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_16542600_16544800
H1_mix_00043217	chr19	+	1212	3	FSM	ENSG00000072954.7	ENST00000595452.1	798	3	0	-414	0	414	multi-exon	FALSE	canonical	3	98	junction_2	7.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGATAAAAGGGTCAATCC	74	False	NA	NA	False	AATAAA	-41	NA	16661241	16681351	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_16661342_16679983_16680141_16680396
H1_mix_00043218	chr19	+	5060	19	FSM	ENSG00000127511.10	ENST00000248054.10	5038	19	-22	0	-22	0	multi-exon	FALSE	canonical	3	104	junction_9	100.388074152754	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAAGCCGTGAGGGTGTG	NA	False	NA	14	True	ATTAAA	-20	NA	16829375	16880349	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_16829541_16829790_16829898_16831493_16831648_16841767_16841969_16846969_16847114_16851411_16851535_16853068_16853159_16854142_16854262_16862351_16862560_16863679_16863797_16865409_16865649_16866372_16866557_16869459_16870076_16871228_16871399_16876054_16876229_16876485_16876579_16877544_16877640_16878182_16878391_16878496
H1_mix_00043219	chr19	+	2398	12	NIC	ENSG00000127511.10	novel	5038	19	NA	NA	-11	602	combination_of_known_splicesites	FALSE	canonical	2	17	junction_8	127.925662814822	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCAGCATAAGACAGAGGT	NA	False	NA	NA	False	NA	NA	NA	16829386	16870225	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_16829541_16829790_16829898_16831493_16831648_16841767_16841969_16846969_16847114_16851411_16851535_16853068_16853159_16854142_16854262_16863679_16863797_16865409_16865649_16866372_16866557_16869459
H1_mix_00043220	chr19	+	4460	8	FSM	ENSG00000127511.10	ENST00000596802.5	2556	8	-39	-1865	-30	1865	multi-exon	FALSE	canonical	3	323	junction_6	35.765106698329	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGCCAACAAATGGCTTG	NA	False	NA	NA	False	AATAAA	-20	NA	16829367	16857610	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_16829541_16829790_16829898_16831493_16831648_16841767_16841969_16846969_16847114_16851411_16851535_16853068_16853159_16854142
H1_mix_00043221	chr19	+	5164	20	FSM	ENSG00000127511.10	ENST00000379803.5	5129	20	-39	4	-30	0	multi-exon	TRUE	canonical	3	31	junction_10	115.241790857791	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAAGCCGTGAGGGTGTG	NA	False	NA	14	True	ATTAAA	-20	NA	16829367	16880349	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_16829541_16829790_16829898_16831493_16831648_16841767_16841969_16846969_16847114_16851411_16851535_16853068_16853159_16854142_16854262_16862351_16862560_16862883_16862980_16863679_16863797_16865409_16865649_16866372_16866557_16869459_16870076_16871228_16871399_16876054_16876229_16876485_16876579_16877544_16877640_16878182_16878391_16878496
H1_mix_00043222	chr19	+	1104	7	FSM	ENSG00000127511.10	ENST00000596638.1	1104	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_6	126.466618344746	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACAGCAATAAAGCGTAAT	NA	False	NA	NA	False	NA	NA	NA	16841951	16863286	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_16841969_16846969_16847114_16851411_16851535_16853068_16853159_16854142_16854262_16862351_16862560_16862883
H1_mix_00043225	chr19	+	6691	5	FSM	ENSG00000127511.10	ENST00000595049.5	904	5	-4144	-1643	1818	0	multi-exon	FALSE	canonical	3	204	junction_3	10.5593560409714	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAAGCCGTGAGGGTGTG	8423	False	NA	14	True	ATTAAA	-20	NA	16871786	16880349	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_16876229_16876485_16876579_16877544_16877640_16878182_16878391_16878496
H1_mix_00043229	chr19	+	7721	39	NIC	ENSG00000099331.14	novel	7595	40	NA	NA	0	0	intron_retention	FALSE	canonical	3	116	junction_28	30.1107949463173	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGTGCATGGGACGCC	-21	True	NA	10	True	AATAAA	-12	NA	17075776	17213284	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_17075875_17101659_17102558_17145396_17145492_17152643_17152707_17153966_17154067_17154314_17154416_17156908_17157039_17159394_17159485_17162349_17162467_17162987_17163123_17167942_17168065_17172335_17172478_17172758_17172964_17175662_17175742_17180926_17181041_17183828_17183869_17184864_17184988_17185920_17186002_17187934_17188046_17191096_17191220_17192745_17193063_17194555_17195474_17197791_17197859_17198183_17198309_17200292_17200427_17200638_17200830_17201925_17202025_17202129_17202304_17202844_17202884_17203146_17203259_17205262_17205337_17205959_17206153_17206247_17206377_17206678_17206785_17207112_17207245_17209585_17209710_17210332_17210381_17210714_17210853_17211650
H1_mix_00043230	chr19	+	7606	40	FSM	ENSG00000099331.14	ENST00000682292.1	7606	40	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_38	46.2464597859668	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGCATGGGACGCCTG	-21	True	NA	12	True	AATAAA	-14	NA	17075776	17213286	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17075875_17101659_17102558_17145396_17145492_17152643_17152707_17153966_17154067_17154314_17154416_17156908_17157039_17159394_17159485_17162349_17162467_17162987_17163123_17167942_17168065_17172335_17172478_17172758_17172964_17175662_17175742_17180926_17181041_17183828_17183869_17184864_17184988_17185920_17186002_17187934_17188046_17191096_17191220_17192745_17193063_17194555_17195474_17197791_17197859_17198183_17198309_17200292_17200427_17200638_17200830_17201925_17202025_17202129_17202304_17202841_17202884_17203146_17203259_17205262_17205337_17205959_17206153_17206247_17206377_17206678_17206785_17207112_17207245_17209585_17209710_17210332_17210381_17210714_17210849_17211646_17211775_17211894
H1_mix_00043231	chr19	+	7627	40	FSM	ENSG00000099331.14	ENST00000595618.5	7623	40	-4	0	0	0	multi-exon	FALSE	canonical	0	0	junction_38	47.8205609403759	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGACGCCTGCTCATATGG	-21	True	NA	21	True	AATAAA	-23	NA	17075776	17213295	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17075875_17101659_17102558_17145396_17145492_17152643_17152707_17153966_17154067_17154314_17154416_17156908_17157039_17159394_17159485_17162349_17162467_17162987_17163123_17167942_17168065_17172335_17172478_17172758_17172964_17175662_17175742_17180926_17181041_17183828_17183869_17184864_17184988_17185920_17186002_17187934_17188046_17191096_17191220_17192745_17193063_17194555_17195474_17197791_17197859_17198183_17198309_17200292_17200427_17200638_17200830_17201925_17202025_17202129_17202304_17202841_17202884_17203146_17203259_17205262_17205337_17205959_17206153_17206247_17206377_17206678_17206785_17207112_17207245_17209585_17209710_17210332_17210381_17210714_17210849_17211646_17211787_17211894
H1_mix_00043234	chr19	+	5344	27	NIC	ENSG00000099331.14	novel	7595	40	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	53.4292653003253	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGCATGGGACGCCTG	NA	False	NA	12	True	AATAAA	-14	NA	17172812	17213286	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_17172964_17175662_17175742_17183828_17183869_17184864_17184988_17185920_17186002_17187934_17188046_17191096_17191220_17192745_17193063_17194555_17195474_17197791_17197859_17198183_17198309_17200292_17200427_17200638_17200830_17201925_17202025_17202129_17202304_17202844_17202884_17203146_17203259_17205262_17205337_17205959_17206153_17206247_17206377_17206678_17206785_17207112_17207245_17209585_17209710_17210332_17210381_17210714_17210853_17211650_17211775_17211894
H1_mix_00043239	chr19	+	1024	8	FSM	ENSG00000053501.14	ENST00000263897.10	845	8	-179	0	-168	0	multi-exon	FALSE	canonical	0	0	junction_5	36.0860649230787	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTCTTCCGTCTGTCC	NA	False	NA	9	True	AATAAA	-16	NA	17215177	17219829	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17215508_17215801_17215852_17215991_17216071_17216168_17216322_17217452_17217463_17218363_17218392_17219212_17219388_17219630
H1_mix_00043240	chr19	+	754	7	FSM	ENSG00000053501.14	ENST00000594724.5	744	7	-10	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	37.9096147288374	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCCCACCTTGTCTGTCTT	-7	True	NA	-1	True	AATAAA	-6	NA	17215387	17219819	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17215508_17215991_17216071_17216168_17216322_17217452_17217463_17218363_17218392_17219212_17219388_17219630
H1_mix_00043243	chr19	+	542	3	FSM	ENSG00000099330.9	ENST00000602236.5	524	3	-18	0	-18	0	multi-exon	FALSE	canonical	3	19	junction_1	30	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTCCCCCATGTGAT	NA	False	NA	NA	False	NA	NA	NA	17226194	17227199	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17226354_17226692_17226870_17226993
H1_mix_00043244	chr19	+	659	4	FSM	ENSG00000099330.9	ENST00000601576.1	638	4	-21	0	-12	0	multi-exon	FALSE	canonical	3	12	junction_2	50.2858495669176	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGGCAAAGCTCAGGCAG	-3	True	NA	NA	False	NA	NA	NA	17226200	17227943	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17226354_17226692_17226870_17226974_17227200_17227839
H1_mix_00043245	chr19	+	1222	5	FSM	ENSG00000099330.9	ENST00000594283.5	1201	5	-21	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	20.6397674405503	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTATTAGACACCTACTG	-13	True	NA	-7	True	AATAAA	-1	NA	17226221	17229202	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17226317_17226692_17227200_17227839_17228006_17228255_17228310_17228802
H1_mix_00043246	chr19	+	1124	6	FSM	ENSG00000099330.9	ENST00000215061.9	1111	6	-13	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	25.7837157911733	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAGTATAATTACTTAACA	9	False	NA	10	True	AATAAA	-18	NA	17226212	17229219	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17226317_17226692_17226870_17226993_17227200_17227839_17228006_17228255_17228310_17228802
H1_mix_00043247	chr19	+	910	6	FSM	ENSG00000099330.9	ENST00000600232.5	878	6	-86	54	-46	0	multi-exon	FALSE	canonical	3	20	junction_5	44.3783731112352	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGTAGGGCCTGCTCTC	NA	False	NA	-44	True	NA	NA	NA	17226166	17229165	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17226317_17226692_17226870_17226993_17227200_17227839_17228006_17228255_17228310_17229008
H1_mix_00043248	chr19	+	1044	5	FSM	ENSG00000099330.9	ENST00000597836.5	1044	5	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	26.3284541893367	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGTAGGGCCTGCTCTC	-10	True	NA	-44	True	NA	NA	NA	17226614	17229165	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17226870_17226993_17227200_17227839_17228006_17228255_17228310_17228802
H1_mix_00043251	chr19	+	1482	9	FSM	ENSG00000105393.16	ENST00000359435.8	1472	9	-10	0	0	0	multi-exon	FALSE	canonical	3	264	junction_1	302.187002326374	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAAGTCCACGCCAATCAC	NA	False	NA	32	True	AATAAA	-18	NA	17267375	17279337	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17267528_17268755_17269092_17271596_17271656_17273903_17274025_17274106_17274186_17275800_17275826_17276494_17276625_17276822_17276910_17278844
H1_mix_00043252	chr19	+	1383	9	FSM	ENSG00000105393.16	ENST00000598188.6	1377	9	-6	0	0	0	multi-exon	FALSE	canonical	3	841	junction_1	129.41696179404	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAAGTCCACGCCAATCAC	-11	True	NA	32	True	AATAAA	-18	NA	17267436	17279337	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17267528_17268793_17269092_17271596_17271656_17273903_17274025_17274106_17274186_17275800_17275826_17276494_17276625_17276822_17276910_17278844
H1_mix_00043256	chr19	+	3188	9	FSM	ENSG00000160117.16	ENST00000394458.7	3218	9	28	2	10	-2	multi-exon	FALSE	canonical	3	11	junction_1	6.14410286372225	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTATGAACTCGCCCTG	-7	True	NA	6	True	AATAAA	-14	NA	17281672	17287644	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17281983_17282056_17282210_17282655_17282762_17282863_17283003_17283224_17283963_17284088_17284267_17285430_17285591_17285680_17285820_17286379
H1_mix_00043262	chr19	+	604	4	Antisense	novelGene_ENSG00000074855.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	14	junction_3	2.16024689946929	13	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGGGCTCAAGTGATGC	1676	False	NA	-80	True	NA	NA	NA	17329851	17332338	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr19_+_17330007_17330926_17330992_17331114_17331432_17332271
H1_mix_00043266	chr19	+	2495	9	FSM	ENSG00000130299.17	ENST00000600625.5	2493	9	-2	0	0	0	multi-exon	FALSE	canonical	1	43	junction_4	84.0333825036217	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTCTACAAATTGTCATT	-16	True	NA	28	True	TATAAA	-15	NA	17337552	17342723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17337665_17338007_17338256_17338364_17338452_17338538_17338742_17338953_17339027_17339122_17339267_17339433_17339600_17341106_17341323_17341477
H1_mix_00043269	chr19	+	1752	9	NNC	ENSG00000130299.17	novel	2493	9	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_3	97.5919438273467	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAGGTGATCTAGAAGTG	21	True	NA	NA	False	NA	NA	NA	17337589	17342021	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_17337665_17338007_17338256_17338364_17338452_17338542_17338742_17338953_17339027_17339122_17339267_17339433_17339600_17341106_17341323_17341477
H1_mix_00043272	chr19	+	2054	4	FSM	ENSG00000282851.2	ENST00000635435.2	1269	4	-10	-775	4	42	multi-exon	FALSE	canonical	1	5	junction_1	0.942809041582063	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCGAGGCAGAGTTTGCA	8	True	NA	61	True	NA	NA	NA	17405752	17415780	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17405988_17406076_17406297_17413096_17413306_17414390
H1_mix_00043274	chr19	+	1398	4	FSM	ENSG00000141971.13	ENST00000526234.1	934	4	-75	-389	0	389	multi-exon	FALSE	canonical	3	287	junction_3	42.7629122799964	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTCCCCAAAAAAAAAAAAAA	-6	True	NA	NA	False	NA	NA	NA	17420046	17423354	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17420226_17420312_17420412_17420537_17420635_17422331
H1_mix_00043277	chr19	+	3579	12	FSM	ENSG00000130304.17	ENST00000252595.12	3514	12	-65	0	-30	0	multi-exon	TRUE	canonical	0	0	junction_10	15.5961427738235	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCCTGCTGGGAGCCCA	70	False	NA	22	True	AATAAA	-14	NA	17470458	17506168	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17470708_17486562_17486958_17487173_17487336_17487459_17487530_17488847_17488940_17489007_17489118_17497254_17497465_17500277_17500405_17500494_17500633_17500711_17500877_17501272_17501420_17504454
H1_mix_00043279	chr19	+	688	5	FSM	ENSG00000130304.17	ENST00000593701.5	688	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	6.86931583201704	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGTCAGCGAGAGCGCCA	NA	False	NA	NA	False	NA	NA	NA	17488759	17500555	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17488940_17489007_17489118_17497254_17497465_17500277_17500405_17500494
H1_mix_00043285	chr19	+	2941	2	FSM	ENSG00000130309.12	ENST00000593832.1	2941	2	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGGGATTTTGCTCGG	NA	False	NA	50	True	AATAAA	-25	NA	17579950	17583162	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17580906_17581176
H1_mix_00043287	chr19	+	689	4	FSM	ENSG00000130479.11	ENST00000598769.5	717	4	28	0	0	0	multi-exon	FALSE	canonical	3	646	junction_3	42.339894504671	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAATTCCTGGAGTACGTGG	618	False	NA	NA	False	NA	NA	NA	17720751	17726007	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17721038_17724125_17724209_17725048_17725190_17725828
H1_mix_00043289	chr19	+	3114	28	FSM	ENSG00000130475.15	ENST00000600676.5	3094	28	-20	0	7	0	multi-exon	FALSE	canonical	1	10	junction_2	83.0953639270738	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGGAAGTATCCTTTGCG	14	False	NA	19	True	AATAAA	-44	NA	17747724	17788568	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17747815_17754316_17754362_17755117_17755192_17762761_17762854_17764374_17764450_17766668_17766811_17770424_17770578_17770791_17770897_17772456_17772556_17772644_17772742_17774238_17774284_17774393_17774479_17775055_17775081_17775455_17775514_17775982_17776162_17776246_17776272_17776634_17776687_17778136_17778229_17778608_17778885_17781230_17781344_17781451_17781540_17781711_17781821_17783016_17783173_17784102_17784236_17784724_17784925_17786573_17786630_17787681_17787847_17788283
H1_mix_00043292	chr19	+	559	8	FSM	ENSG00000130475.15	ENST00000597474.5	556	8	-3	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	17.6044984974562	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTCTCGGGCGTCAGCCA	-3	True	NA	NA	False	NA	NA	NA	17747752	17770463	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17747815_17754316_17754362_17754591_17754622_17755117_17755192_17762761_17762854_17764374_17764450_17766668_17766811_17770424
H1_mix_00043295	chr19	+	1766	10	ISM	ENSG00000130475.15	ENST00000597512.1	2934	25	15721	-30	-17	0	3prime_fragment	FALSE	canonical	3	200	junction_5	17.3340455694125	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGGAAGTATCCTTTGCG	-13	True	NA	19	True	AATAAA	-44	NA	17778423	17788568	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_17778885_17781230_17781344_17781451_17781540_17781711_17781821_17783016_17783173_17784102_17784236_17784724_17784925_17786573_17786630_17787681_17787847_17788283
H1_mix_00043296	chr19	+	2700	3	FSM	ENSG00000179913.11	ENST00000318683.7	2692	3	-32	24	-30	-24	multi-exon	FALSE	canonical	2	6	junction_1	1	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTCAGCTCATAACCCC	295	False	NA	NA	False	NA	NA	NA	17795105	17813552	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17795207_17807757_17808375_17811570
H1_mix_00043297	chr19	+	513	6	FSM	ENSG00000105640.13	ENST00000599898.5	491	6	-22	0	0	0	multi-exon	TRUE	canonical	3	111	junction_2	8070.33775253552	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGCCGCATGTTTTCTTT	7	True	NA	13	True	AATAAA	-18	NA	17859909	17863315	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17859975_17861292_17861308_17861424_17861473_17862093_17862224_17862917_17863028_17863170
H1_mix_00043299	chr19	+	1661	4	FSM	ENSG00000105640.13	ENST00000599870.1	1084	4	-638	61	0	0	multi-exon	FALSE	canonical	3	20241	junction_3	618.977113201019	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCAACACCTTCTTCTAG	203	False	NA	-59	True	NA	NA	NA	17860124	17863243	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17861473_17862093_17862224_17862917_17863028_17863170
H1_mix_00043300	chr19	+	855	5	FSM	ENSG00000105640.13	ENST00000597648.5	683	5	-172	0	0	0	multi-exon	FALSE	canonical	3	2063	junction_1	8175.55193855436	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCAACACCTTCTTCTAG	31	False	NA	-59	True	NA	NA	NA	17859952	17863243	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17860315_17861292_17861473_17862093_17862224_17862917_17863028_17863170
H1_mix_00043301	chr19	+	998	5	FSM	ENSG00000007080.11	ENST00000445755.7	987	5	-11	0	-11	0	multi-exon	FALSE	canonical	3	984	junction_1	403.92287320725	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAAGCCTAAGTGAGTGG	-10	True	NA	24	True	AATAAA	-27	NA	17933003	17943985	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17933049_17936409_17936580_17942655_17942846_17943260_17943376_17943507
H1_mix_00043302	chr19	+	3093	5	FSM	ENSG00000007080.11	ENST00000597436.5	1055	5	-2043	5	30	1	multi-exon	FALSE	canonical	3	21	junction_1	815.362802683566	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGCCTAAGTGAGTGGG	9	False	NA	25	True	AATAAA	-28	NA	17933052	17943986	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17935192_17936409_17936580_17942655_17942846_17943260_17943376_17943507
H1_mix_00043303	chr19	+	2881	9	NIC	ENSG00000105642.16	novel	3595	10	NA	NA	-12	-695	combination_of_known_junctions	FALSE	canonical	2	11	junction_7	11.8736841376213	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTCTACTAAAAATATAAAAA	-10	True	NA	NA	False	NA	NA	NA	17967094	17999385	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_17967318_17973807_17974291_17975091_17975188_17981708_17982128_17985311_17985454_17988414_17988526_17989715_17989819_17993489_17993560_17998151
H1_mix_00043307	chr19	+	5898	27	FSM	ENSG00000099308.11	ENST00000262811.10	5896	27	-2	0	-2	0	multi-exon	FALSE	canonical	3	12	junction_2	9.89560897181558	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCAACGTCTGGATTTGT	13	True	NA	30	True	AATAAA	-22	NA	18097790	18151692	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18097832_18107586_18107619_18121684_18121774_18121849_18121923_18122672_18122752_18123216_18123375_18123579_18123656_18123938_18124149_18124264_18124367_18124641_18124775_18128399_18128459_18128865_18128952_18130493_18130703_18131908_18132048_18134578_18134712_18134816_18134983_18135739_18135842_18137238_18137362_18139014_18139125_18141881_18142016_18143762_18144008_18144465_18144694_18145002_18145230_18145742_18145866_18146880_18147018_18147442_18147625_18149190
H1_mix_00043309	chr19	+	6118	26	NNC	ENSG00000099308.11	novel	354	5	NA	NA	-5413	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	9.67107026135164	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCAACGTCTGGATTTGT	-31	True	NA	30	True	AATAAA	-22	NA	18117985	18151692	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_18118255_18121684_18121774_18121852_18121923_18122672_18122752_18123216_18123375_18123579_18123656_18123938_18124149_18124264_18124367_18124641_18124775_18128399_18128459_18128865_18128952_18130493_18130703_18131908_18132048_18134578_18134712_18134816_18134983_18135739_18135842_18137238_18137362_18139014_18139125_18141881_18142016_18143762_18144008_18144465_18144694_18145002_18145230_18145742_18145866_18146880_18147045_18147442_18147625_18149190
H1_mix_00043310	chr19	+	3990	16	FSM	ENSG00000105647.19	ENST00000222254.13	3980	16	-10	0	-10	0	multi-exon	TRUE	canonical	3	476	junction_6	105.955000930689	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTGATTCTGTTGTCAG	3148	False	NA	21	True	TATAAA	-13	NA	18153152	18170532	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18153295_18155456_18156202_18160470_18160564_18160918_18160970_18161053_18161186_18161278_18161496_18161965_18162052_18162201_18162311_18162407_18162507_18162966_18163148_18163262_18163389_18166159_18166303_18167129_18167307_18168474_18168547_18168725_18168897_18169086
H1_mix_00043317	chr19	+	1220	2	FSM	ENSG00000130513.7	ENST00000252809.3	1200	2	-20	0	-20	0	multi-exon	FALSE	canonical	2	4	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTGGTGTCCAGGATAA	3969	False	NA	19	True	AATAAA	-16	NA	18386137	18389176	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18386467_18388285
H1_mix_00043318	chr19	+	1732	17	FSM	ENSG00000130511.16	ENST00000348495.10	1721	17	-11	0	-11	0	multi-exon	TRUE	canonical	3	181	junction_5	50.300930346764	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTCTCAGATTCCCTCT	-4	True	NA	20	True	AATAAA	-26	NA	18419324	18434562	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18419708_18427350_18427424_18427751_18427814_18427897_18427983_18430840_18430931_18431646_18431707_18431792_18431863_18431999_18432071_18432146_18432215_18432558_18432605_18432699_18432736_18432828_18432884_18432972_18433044_18433134_18433214_18433584_18433614_18433709_18433818_18434216
H1_mix_00043322	chr19	+	900	9	FSM	ENSG00000130511.16	ENST00000593641.3	900	9	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_8	68.9886766071071	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTCTCAGATTCCCTCT	276	False	NA	20	True	AATAAA	-26	NA	18432199	18434562	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18432215_18432558_18432605_18432699_18432736_18432828_18432884_18432972_18433044_18433134_18433214_18433584_18433614_18433709_18433933_18434216
H1_mix_00043323	chr19	+	793	3	FSM	ENSG00000130511.16	ENST00000599699.2	793	3	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_2	0.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTCTCAGATTCCCTCT	8	True	NA	20	True	AATAAA	-26	NA	18433274	18434562	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18433614_18433709_18433818_18434216
H1_mix_00043325	chr19	+	1113	6	FSM	ENSG00000105700.11	ENST00000595073.5	1095	6	-18	0	0	0	multi-exon	FALSE	canonical	3	80	junction_5	287.313069664434	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAATATTTTTGTACCCG	-7	True	NA	-56	True	NA	NA	NA	18557869	18569297	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18557915_18562035_18562158_18564868_18565022_18567131_18567179_18568401_18568680_18568829
H1_mix_00043326	chr19	+	1333	6	FSM	ENSG00000105700.11	ENST00000601630.5	1327	6	-6	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	373.736591732734	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCCGATGTTTACAGATG	-7	True	NA	-43	True	NA	NA	NA	18557869	18569310	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18557915_18562035_18562158_18564868_18565022_18565133_18565191_18567131_18567179_18568401
H1_mix_00043327	chr19	+	1344	5	FSM	ENSG00000105700.11	ENST00000222307.9	1344	5	0	0	0	0	multi-exon	FALSE	canonical	3	586	junction_1	108.273669467697	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACACCTAGCTGTGGCTTC	-7	True	NA	25	True	AATAAA	-27	NA	18557869	18569378	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18557915_18562035_18562158_18564868_18565022_18567131_18567179_18568401
H1_mix_00043329	chr19	+	2738	5	FSM	ENSG00000105700.11	ENST00000602094.5	2738	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	343.792361026245	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACACCTAGCTGTGGCTTC	110	False	NA	25	True	AATAAA	-27	NA	18559111	18569378	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18560551_18562035_18562158_18564868_18565022_18567131_18567179_18568401
H1_mix_00043331	chr19	+	548	5	FSM	ENSG00000221983.8	ENST00000596304.5	554	5	6	0	6	0	multi-exon	FALSE	canonical	2	89	junction_1	2456.95024369644	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCAATAAAGTGTCCCTT	-3	True	NA	2	True	NA	NA	NA	18571735	18575202	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18571837_18573292_18573404_18573661_18573749_18574869_18574973_18575056
H1_mix_00043332	chr19	+	2800	5	FSM	ENSG00000221983.8	ENST00000442744.7	2848	5	-2	50	0	-50	multi-exon	FALSE	canonical	3	1378	junction_1	1904.14592074767	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGCAAAGGTCCGCAGCTT	-9	True	NA	54	True	NA	NA	NA	18571854	18577500	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18571910_18573292_18573404_18573661_18573749_18574869_18574973_18575056
H1_mix_00043333	chr19	+	580	5	FSM	ENSG00000221983.8	ENST00000430157.6	572	5	-8	0	-8	0	multi-exon	FALSE	canonical	3	2590	junction_1	1388.27417591051	1087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTCCTCATGGCTGAT	55	False	NA	41	True	AATAAA	-29	NA	18571793	18575241	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18571888_18573292_18573404_18573661_18573749_18574869_18574973_18575056
H1_mix_00043334	chr19	+	764	6	FSM	ENSG00000221983.8	ENST00000596273.5	764	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2813.21656471733	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGCAGCAATTGGTGTC	-9	True	NA	29	True	AATAAA	-17	NA	18571854	18575229	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18571888_18572350_18572608_18573292_18573404_18573661_18573749_18574869_18574973_18575056
H1_mix_00043335	chr19	+	799	6	FSM	ENSG00000221983.8	ENST00000595683.5	779	6	-20	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2809.32480144251	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCCTCATGGCTGATC	-9	True	NA	42	True	AATAAA	-30	NA	18571854	18575242	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18571910_18572350_18572608_18573292_18573404_18573661_18573749_18574869_18574973_18575056
H1_mix_00043336	chr19	+	668	5	FSM	ENSG00000221983.8	ENST00000598780.5	668	5	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	2431.59396024501	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCTCCTGCCCAGGCCC	63	False	NA	-30	True	NA	NA	NA	18571926	18575170	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18572180_18573292_18573404_18573661_18573749_18574869_18574973_18575056
H1_mix_00043338	chr19	+	514	4	FSM	ENSG00000221983.8	ENST00000597451.5	514	4	0	0	0	0	multi-exon	FALSE	canonical	3	5361	junction_3	344.891287219611	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTCCTCATGGCTGAT	1401	False	NA	41	True	AATAAA	-29	NA	18573264	18575241	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18573404_18573661_18573749_18574869_18574973_18575056
H1_mix_00043339	chr19	+	994	5	FSM	ENSG00000006015.18	ENST00000358607.11	767	5	-237	10	-124	0	multi-exon	FALSE	canonical	3	348	junction_2	102.146952964834	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTCTGTAGCCGCTCTGC	NA	False	NA	5	True	AATAAA	-7	NA	18588560	18592327	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18588901_18588994_18589078_18589412_18589684_18590853_18590934_18592107
H1_mix_00043340	chr19	+	927	5	FSM	ENSG00000006015.18	ENST00000450195.6	702	5	-234	9	-123	0	multi-exon	FALSE	canonical	3	107	junction_2	205.64821297546	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTCTGTAGCCGCTCTGC	NA	False	NA	5	True	AATAAA	-7	NA	18588561	18592327	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18588901_18588994_18589078_18589478_18589684_18590853_18590934_18592107
H1_mix_00043341	chr19	+	1337	4	FSM	ENSG00000006015.18	ENST00000597371.1	1081	4	-247	-9	-123	0	multi-exon	FALSE	canonical	3	562	junction_2	21.3541565040626	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGCTCTGCCATCTCTGT	NA	False	NA	14	True	AATAAA	-16	NA	18588561	18592336	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18588901_18588994_18589684_18590853_18590934_18592107
H1_mix_00043342	chr19	+	723	4	FSM	ENSG00000006015.18	ENST00000601736.1	491	4	-241	9	-124	0	multi-exon	FALSE	canonical	3	66	junction_2	247.140086230911	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTCTGTAGCCGCTCTGC	NA	False	NA	5	True	AATAAA	-7	NA	18588560	18592327	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18588901_18588994_18589078_18590853_18590934_18592107
H1_mix_00043343	chr19	+	2465	1	FSM	ENSG00000006015.18	ENST00000595077.1	2465	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGCTCTGCCATCTCTGT	1042	False	NA	14	True	AATAAA	-16	NA	18589871	18592336	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18589900_18592300
H1_mix_00043345	chr19	+	1763	7	FSM	ENSG00000105696.9	ENST00000598660.1	1683	7	-46	-34	-39	1	multi-exon	FALSE	canonical	3	35	junction_6	5.18812747209113	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGGCTGAGCCTGCTTC	236	False	NA	8	True	AATAAA	-18	NA	18612830	18621040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18613130_18613871_18614017_18614103_18614196_18615974_18616128_18616999_18617103_18618154_18618493_18620407
H1_mix_00043346	chr19	+	4404	3	FSM	ENSG00000167487.12	ENST00000300976.9	4351	3	-53	0	-50	0	multi-exon	TRUE	canonical	3	70	junction_1	6	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTTGAATCTTCACTTT	571	False	NA	14	True	AAAAAG	-22	NA	18636974	18671721	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18637138_18664260_18664444_18667663
H1_mix_00043356	chr19	+	2235	14	FSM	ENSG00000105671.12	ENST00000629999.3	2438	14	0	203	0	-203	multi-exon	TRUE	canonical	3	16	junction_2	62.4117838971998	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAATGTGGGCTAAGCCC	-12	True	NA	NA	False	NA	NA	NA	18919704	18928986	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18919857_18920579_18920704_18920833_18920910_18921662_18921749_18921842_18921965_18922325_18922514_18922603_18922745_18924232_18924309_18924622_18924700_18924881_18924980_18926302_18926378_18927765_18927855_18927964_18928037_18928127
H1_mix_00043357	chr19	+	1701	13	FSM	ENSG00000105671.12	ENST00000602113.5	1691	13	-10	0	0	0	multi-exon	TRUE	canonical	2	7	junction_1	51.4837487843386	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTCAGTCTGACTTTCG	11	True	NA	22	True	AATAAA	-13	NA	18919727	18928622	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18919857_18920650_18920704_18921662_18921749_18921842_18921965_18922325_18922514_18922603_18922745_18924232_18924309_18924622_18924700_18924881_18924980_18926302_18926378_18927765_18927855_18927964_18928037_18928127
H1_mix_00043359	chr19	+	962	5	FSM	ENSG00000105676.14	ENST00000540792.5	951	5	-11	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	206.307264777564	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGCTGATGAGGCTGACC	-10	True	NA	NA	False	NA	NA	NA	19033602	19051902	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19033931_19034130_19034239_19042715_19042878_19043991_19044075_19051621
H1_mix_00043360	chr19	+	2419	8	FSM	ENSG00000105676.14	ENST00000269932.10	2412	8	-7	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	136.592048652555	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGGGTGAACAGCGGAG	-10	True	NA	3	True	AATAAA	-4	NA	19033602	19058159	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19034014_19042710_19042878_19043991_19044075_19051621_19052196_19054151_19054322_19055264_19055397_19055790_19055929_19057415
H1_mix_00043361	chr19	+	1252	6	FSM	ENSG00000105676.14	ENST00000539985.5	1252	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	206.95178182369	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGGCCCTGCGTGTCAT	27	True	NA	NA	False	NA	NA	NA	19033639	19052068	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19033931_19034130_19034239_19037551_19037708_19042710_19042878_19043991_19044075_19051621
H1_mix_00043362	chr19	+	2080	8	FSM	ENSG00000105676.14	ENST00000392335.6	2383	8	284	19	-2	0	multi-exon	FALSE	canonical	3	339	junction_1	59.1801124896338	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGGGTGAACAGCGGAG	-31	True	NA	3	True	AATAAA	-4	NA	19033858	19058159	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19033931_19042710_19042878_19043991_19044075_19051621_19052196_19054151_19054322_19055264_19055397_19055790_19055929_19057415
H1_mix_00043363	chr19	+	2472	9	FSM	ENSG00000105676.14	ENST00000535612.6	2461	9	-28	17	0	0	multi-exon	FALSE	canonical	3	103	junction_1	152.687129041711	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGGGTGAACAGCGGAG	883	False	NA	3	True	AATAAA	-4	NA	19033574	19058159	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19033931_19034130_19034239_19042710_19042878_19043991_19044075_19051621_19052196_19054151_19054322_19055264_19055397_19055790_19055929_19057415
H1_mix_00043364	chr19	+	3247	8	FSM	ENSG00000181035.14	ENST00000318596.8	3267	8	0	20	0	-20	multi-exon	FALSE	canonical	2	26	junction_1	5.0548017179869	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAGTTTTTAAATGCAA	-12	True	NA	NA	False	AATAAA	-11	NA	19063993	19113010	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19064116_19096090_19096206_19101780_19101887_19104912_19104939_19105560_19105728_19106268_19106386_19107893_19108046_19110568
H1_mix_00043369	chr19	+	1227	9	FSM	ENSG00000064490.14	ENST00000407360.7	1212	9	-15	0	-15	0	multi-exon	FALSE	canonical	3	136	junction_2	70.5775282933598	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGGACAGGTGGTGGG	493	False	NA	-42	True	NA	NA	NA	19192747	19201802	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19193101_19193938_19194134_19196962_19197047_19197185_19197252_19197520_19197622_19198106_19198233_19198656_19198724_19199153_19199235_19201648
H1_mix_00043370	chr19	+	895	7	FSM	ENSG00000064490.14	ENST00000541873.6	1002	7	-72	179	0	0	multi-exon	FALSE	canonical	3	230	junction_2	42.882267767562	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGAGTGGGAGTCGGGAGT	14	True	NA	NA	False	NA	NA	NA	19192840	19198722	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19193101_19193938_19194134_19196965_19197047_19197185_19197252_19197520_19197622_19198106_19198233_19198656
H1_mix_00043371	chr19	+	832	6	FSM	ENSG00000064490.14	ENST00000540981.5	832	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	139.94713287524	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGAGTGGGAGTCGGGAGT	14	True	NA	NA	False	NA	NA	NA	19192840	19198722	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19193101_19193938_19194134_19196962_19197047_19197520_19197622_19198106_19198233_19198656
H1_mix_00043372	chr19	+	1059	8	FSM	ENSG00000064490.14	ENST00000392324.8	1059	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	119.481533027886	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGACTTTGCTGTGCTT	84	False	NA	22	True	AATAAA	-15	NA	19192910	19201866	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19193101_19193938_19194134_19196965_19197047_19197520_19197622_19198106_19198233_19198656_19198724_19199153_19199235_19201648
H1_mix_00043373	chr19	+	1277	9	NIC	ENSG00000064490.14	novel	1376	10	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	230	junction_2	40.2212630333758	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGACTTTGCTGTGCTT	504	False	NA	22	True	AATAAA	-15	NA	19192758	19201866	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_19193101_19193938_19194134_19196965_19197047_19197185_19197252_19197520_19197622_19198106_19198233_19198656_19198724_19199153_19199235_19201648
H1_mix_00043374	chr19	+	6376	15	FSM	ENSG00000130287.14	ENST00000252575.11	6402	15	-12	38	-12	-38	multi-exon	FALSE	canonical	2	9	junction_14	11.9343441976747	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCTTGGACATTTTAATA	NA	False	NA	-21	True	NA	NA	NA	19211945	19252195	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19212065_19216946_19217027_19218914_19219317_19224020_19224196_19224305_19224434_19224976_19225271_19226485_19227074_19227280_19228640_19233788_19233906_19234982_19235097_19238252_19238412_19240602_19240686_19245312_19245458_19248699_19248883_19249765
H1_mix_00043375	chr19	+	2361	5	FSM	ENSG00000130287.14	ENST00000590187.2	2361	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	9.83298021964857	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGATCCTATGTGTGCTG	NA	False	NA	13	True	AGTAAA	-32	NA	19226842	19238792	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19227074_19227280_19228640_19233788_19233906_19234982_19235097_19238252
H1_mix_00043377	chr19	+	3752	17	NIC	ENSG00000129933.21	novel	4845	19	NA	NA	12	2	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	46.8781665597109	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATATTCTACTCGAGCT	4	True	NA	8	True	ATTAAA	-17	NA	19320840	19357757	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_19321136_19337169_19337266_19338844_19338940_19340845_19340874_19341251_19341408_19342534_19342682_19342775_19342867_19343836_19343941_19344848_19344927_19345303_19345370_19347279_19347367_19348888_19348939_19349154_19349233_19349324_19349437_19354354_19354446_19355263_19355392_19355707
H1_mix_00043380	chr19	+	3507	2	FSM	ENSG00000129933.21	ENST00000589637.1	555	2	-78	-2874	-78	133	multi-exon	FALSE	canonical	3	193	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCCAGATGACGTGAATG	9694	False	NA	NA	False	NA	NA	NA	19355064	19358887	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19355392_19355707
H1_mix_00043381	chr19	+	931	4	FSM	ENSG00000167491.18	ENST00000417582.6	655	4	-276	0	-79	0	multi-exon	TRUE	canonical	3	73	junction_1	254.664921459989	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCGTGCCTGTCTCCCCT	-2	True	NA	NA	False	AATACA	-22	NA	19385746	19492711	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19386139_19465339_19465615_19492305_19492439_19492580
H1_mix_00043382	chr19	+	5714	12	FSM	ENSG00000167491.18	ENST00000683918.1	5714	12	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_1	80.2023267938063	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTTTTGTCCCTTCTG	5	True	NA	18	True	AATAAA	-21	NA	19405674	19508932	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19406020_19465339_19465615_19492305_19492439_19492580_19492713_19494293_19494384_19495753_19495886_19496051_19496220_19498442_19498723_19501117_19501417_19501968_19502044_19502330_19502527_19505343
H1_mix_00043383	chr19	+	5512	12	NIC	ENSG00000167491.18	novel	5714	12	NA	NA	29	0	combination_of_known_splicesites	FALSE	canonical	3	110	junction_1	145.828836609146	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGACTTTTCTTTTGTCCC	73	False	NA	13	True	AATAAA	-16	NA	19405866	19508927	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_19406020_19465344_19465615_19492305_19492439_19492580_19492713_19494293_19494384_19495753_19495886_19496051_19496220_19498442_19498723_19501117_19501417_19501968_19502044_19502330_19502527_19505343
H1_mix_00043385	chr19	+	581	4	FSM	ENSG00000186010.19	ENST00000428459.6	576	4	-5	0	0	0	multi-exon	FALSE	canonical	3	8400	junction_3	144.148072018556	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACACAACCCGCTGGGTG	-4	True	NA	NA	False	NA	NA	NA	19516224	19528022	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19516333_19526181_19526261_19527280_19527353_19527700
H1_mix_00043386	chr19	+	521	5	FSM	ENSG00000186010.19	ENST00000507754.9	521	5	0	0	0	0	multi-exon	FALSE	canonical	3	8400	junction_3	131.575073627188	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGTTTTCCTGGGGA	-4	True	NA	23	True	AATAAA	-17	NA	19516224	19528198	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19516333_19526181_19526261_19527280_19527353_19527700_19527771_19528006
H1_mix_00043387	chr19	+	2785	7	FSM	ENSG00000258674.5	ENST00000555938.1	1100	7	-2	-1683	-2	1683	multi-exon	FALSE	canonical	3	97	junction_5	4194.85534116891	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATCTCAGCACTTTGGG	-4	True	NA	NA	False	NA	NA	NA	19516224	19537759	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19516333_19526181_19526261_19527280_19527353_19527700_19527771_19535033_19535145_19535336_19535451_19535528
H1_mix_00043388	chr19	+	502	5	FSM	ENSG00000186010.19	ENST00000606722.1	502	5	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_3	3703.80291052318	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTGCCTGTTTTCCTGG	32	False	NA	20	True	AATAAA	-14	NA	19516260	19528195	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19516333_19526181_19526261_19527280_19527373_19527700_19527771_19528006
H1_mix_00043389	chr19	+	4132	4	NIC	ENSG00000250067.12	novel	2785	6	NA	NA	2808	178	intron_retention	FALSE	canonical	0	0	junction_3	53.2436746373585	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATCTCAGCACTTTGGG	2070	False	NA	NA	False	NA	NA	NA	19531718	19537759	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_19535145_19535336_19535451_19535528_19535680_19537318
H1_mix_00043391	chr19	+	4642	4	FSM	ENSG00000181896.12	ENST00000592502.2	4642	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	6.94422221866655	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTTCCCTTCTGTTCATT	3	True	NA	20	True	AATAAA	-20	NA	19668838	19683506	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19668967_19677863_19677991_19678725_19678787_19679180
H1_mix_00043394	chr19	+	2714	1	FSM	ENSG00000270325.1	ENST00000603714.1	553	1	-1776	-385	-1776	385	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATCACCGGAGGTCGTGAG	NA	False	NA	NA	False	NA	NA	NA	19855198	19857912	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19855200_19857900
H1_mix_00043397	chr19	+	2268	2	FSM	ENSG00000256771.5	ENST00000355650.4	2268	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGCCTACTCACATCTT	-6	True	NA	20	True	AATACA	-19	NA	19865906	19893648	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19866000_19891473
H1_mix_00043408	chr19	+	1783	5	NIC	ENSG00000213988.11	novel	1918	6	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_3	108.113366426173	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATGTAAAAGCCTTCATT	11	True	NA	5	True	TATAAA	-5	NA	20078003	20127018	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_20078136_20104238_20104366_20105220_20105317_20125005_20126167_20126751
H1_mix_00043409	chr19	+	664	4	NIC	ENSG00000213988.11	novel	1918	6	NA	NA	7	-8	combination_of_known_splicesites	FALSE	canonical	3	39	junction_3	121.013314235344	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAATAAGCTTTTTTGA	19	True	NA	55	True	NA	NA	NA	20078011	20127068	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_20078136_20104238_20104366_20105220_20105317_20126751
H1_mix_00043411	chr19	+	407	1	FSM	ENSG00000270716.1	ENST00000604600.1	301	1	-193	87	-193	-87	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATGGAATACTAATAGGG	NA	False	NA	NA	False	NA	NA	NA	20136739	20137146	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_20136700_20137100
H1_mix_00043414	chr19	+	5531	4	FSM	ENSG00000256229.8	ENST00000335117.9	3895	4	-69	-1567	-69	1567	multi-exon	FALSE	canonical	3	38	junction_3	35.4055865020699	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGGGACTACAGGCGCC	NA	False	NA	NA	False	NA	NA	NA	20167144	20202055	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_20167361_20184355_20184483_20185986_20186083_20196963
H1_mix_00043415	chr19	+	595	1	FSM	ENSG00000271524.1	ENST00000605448.1	595	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGCAGAAATAGAATCTGAC	NA	False	NA	NA	False	AATATA	-28	NA	20221868	20222463	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_20221900_20222500
H1_mix_00043417	chr19	+	3094	2	Antisense	novelGene_ENSG00000231205.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	1256	junction_1	0	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGCGTTTTCCTACCTT	10	False	NA	31	True	AATAAA	-22	NA	20362483	20371960	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr19_+_20362795_20369177
H1_mix_00043419	chr19	+	763	4	FSM	ENSG00000160229.13	ENST00000594534.5	757	4	-6	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	5.79271573232759	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGGAATATTTATAACATT	2	True	NA	NA	False	TATAAA	-1	NA	20776303	20799393	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_20776451_20792511_20792639_20793782_20793879_20799000
H1_mix_00043420	chr19	+	10886	4	FSM	ENSG00000160229.13	ENST00000344519.10	4539	4	5	-6352	-1	6352	multi-exon	FALSE	canonical	2	5	junction_3	12.1928941054479	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGATGACAGAGTGAGACT	7	True	NA	NA	False	NA	NA	NA	20776308	20816347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_20776451_20792511_20792639_20793782_20793879_20805826
H1_mix_00043422	chr19	+	1531	4	FSM	ENSG00000105750.15	ENST00000300540.7	1531	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	27.3130005674953	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGCTTATTTGACTCTA	-17	True	NA	13	True	AATAAA	-21	NA	20923275	20943977	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_20923404_20934023_20934151_20934948_20935048_20942800
H1_mix_00043424	chr19	+	3848	5	NIC	ENSG00000118620.13	novel	3886	5	NA	NA	5	-53	intron_retention	FALSE	canonical	3	18	junction_3	16.3248277173145	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATTGTACTAATTGTAC	NA	False	NA	-45	True	AATAAA	-7	NA	21020638	21059997	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_21020804_21022788_21022882_21033455_21033583_21034088_21034185_21056630
H1_mix_00043434	chr19	+	8119	6	FSM	ENSG00000268995.1_ENSG00000196705.8	ENST00000600692.5	1971	6	-14	-6134	-14	0	multi-exon	FALSE	canonical	3	48	junction_3	13.905394636615	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAACCACATTGTCTTTAT	NA	False	NA	12	True	AATAAA	-19	NA	21142009	21190226	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_21142187_21143550_21143644_21166334_21166462_21167570_21167667_21175452_21175475_21182622
H1_mix_00043436	chr19	+	612	3	FSM	ENSG00000196705.8	ENST00000594425.5	610	3	-2	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	39	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATTGTCTTTATTTACT	-5	True	NA	17	True	AATAAA	-24	NA	21142034	21190231	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_21142187_21143550_21143644_21189864
H1_mix_00043437	chr19	+	2800	6	NIC	ENSG00000196705.8	novel	13894	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_5	29.1849276168367	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAACCACATTGTCTTTAT	0	True	NA	12	True	AATAAA	-19	NA	21142039	21190226	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_21142187_21143550_21143644_21166334_21166462_21167570_21167667_21182622_21184598_21189864
H1_mix_00043439	chr19	+	8055	6	Fusion	ENSG00000268995.1_ENSG00000196705.8	novel	1971	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	50	junction_3	13.4372616257927	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAACCACATTGTCTTTAT	11	False	NA	12	True	AATAAA	-19	NA	21142076	21190226	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_+_21142187_21143550_21143644_21166334_21166462_21167567_21167667_21175452_21175475_21182622
H1_mix_00043440	chr19	+	2412	5	FSM	ENSG00000172687.14	ENST00000311015.7	2442	5	30	0	30	0	multi-exon	FALSE	canonical	3	117	junction_4	129.44014060561	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAATGTTACCTGTC	-2	True	NA	6	True	ATTAAA	-10	NA	21358959	21379300	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_21359144_21361765_21361859_21375237_21375365_21375868_21375965_21377388
H1_mix_00043441	chr19	+	1161	5	FSM	ENSG00000172687.14	ENST00000380870.8	1142	5	-19	0	-19	0	multi-exon	FALSE	canonical	3	212	junction_4	88.4911718760691	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATGTTACCTGTCCC	11	False	NA	8	True	ATTAAA	-12	NA	21358972	21379302	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_21359144_21361765_21361859_21375237_21375365_21375868_21375965_21378628
H1_mix_00043442	chr19	+	1804	5	FSM	ENSG00000172687.14	ENST00000597810.5	747	5	-46	-1011	-27	19	multi-exon	FALSE	canonical	3	40	junction_4	162.699685002768	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTTTGTAATGTGGCTT	3	True	NA	27	True	ATTAAA	-31	NA	21358964	21379321	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_21359144_21361765_21361859_21375237_21375365_21375868_21375965_21378012
H1_mix_00043443	chr19	+	6185	5	FSM	ENSG00000172687.14	ENST00000683779.1	6177	5	-8	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	162.699685002768	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGTGTGAAGTTAATG	-5	True	NA	15	True	AATAAA	-25	NA	21358991	21388582	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_21359144_21361765_21361859_21375237_21375365_21375868_21375965_21382865
H1_mix_00043444	chr19	+	5160	4	FSM	ENSG00000196268.12	ENST00000392288.7	5023	4	-23	-114	-9	114	multi-exon	FALSE	canonical	3	10	junction_2	8.37987005998436	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGCAAATAAGTTAAAGAATA	-17	True	NA	NA	False	NA	NA	NA	21397109	21427691	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_21397268_21405128_21405256_21405760_21405857_21422912
H1_mix_00043446	chr19	+	785	1	Genic_Genomic	ENSG00000196268.12	novel	NA	NA	NA	NA	2838	101	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTGGAGTCTCGCTCTGT	NA	False	NA	104	True	NA	NA	NA	21408115	21408900	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr19_+_21408100_21408900
H1_mix_00043448	chr19	+	4792	4	FSM	ENSG00000197013.11	ENST00000358491.9	4785	4	-7	0	-7	0	multi-exon	FALSE	canonical	3	51	junction_1	32.2937902527543	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATATTTTCAATTATTTG	-13	True	NA	13	True	AATAAA	-20	NA	21505594	21540668	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_21505775_21529657_21529785_21530588_21530685_21536279
H1_mix_00043450	chr19	+	5000	6	NNC	ENSG00000197013.11	novel	4785	4	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	47.4004219390503	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATATTTTCAATTATTTG	-11	True	NA	13	True	AATAAA	-20	NA	21505596	21540668	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_21505775_21527389_21527509_21529081_21529173_21529657_21529785_21530588_21530685_21536279
H1_mix_00043452	chr19	+	4844	6	NNC	ENSG00000197013.11	novel	4785	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	52.7901505964891	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATATTTTCAATTATTTG	33	False	NA	13	True	AATAAA	-20	NA	21505640	21540668	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_21505775_21527389_21527509_21529655_21529785_21530588_21530685_21536279_21538881_21538903
H1_mix_00043457	chr19	+	4441	3	FSM	ENSG00000267886.1	ENST00000600223.1	563	3	10	-3888	10	3888	multi-exon	FALSE	canonical	3	64	junction_1	6.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGATCACACCACTGCACT	-2	True	NA	NA	False	NA	NA	NA	23075220	23104249	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_23075388_23098339_23098414_23100049
H1_mix_00043458	chr19	+	5676	6	NNC	ENSG00000267886.1	novel	563	3	NA	NA	6	47741	at_least_one_novel_splicesite	TRUE	canonical	3	27	junction_3	24.751565607048	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACCTTAGGTCAGGAGCT	-6	True	NA	NA	False	NA	NA	NA	23075216	23148102	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_23075388_23098339_23098414_23100049_23102426_23134079_23134207_23135947_23136044_23145270
H1_mix_00043459	chr19	+	4918	6	NNC	ENSG00000267886.1	novel	581	4	NA	NA	10	3888	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_4	12.3773987574126	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGATCACACCACTGCACT	-2	True	NA	NA	False	NA	NA	NA	23075220	23104249	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_23075388_23095011_23095155_23095262_23095441_23095543_23095700_23098339_23098414_23100049
H1_mix_00043460	chr19	+	442	5	NNC	ENSG00000183850.14	novel	464	3	NA	NA	61	-2294	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	36.3524414585871	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTGCTCTCTATGTGTT	48	False	NA	NA	False	ATTAAA	-13	NA	23075270	23141955	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_23075388_23098339_23098414_23134079_23134207_23135947_23136044_23141927
H1_mix_00043461	chr19	+	3067	1	Intergenic	novelGene_635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTATTTTTAAAAGATGG	NA	False	NA	-36	True	NA	NA	NA	23100838	23103905	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_23100800_23103900
H1_mix_00043463	chr19	+	446	1	FSM	ENSG00000268992.1	ENST00000601004.1	764	1	-63	381	-63	-381	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCCAAACAGGAGTCCTT	NA	False	NA	NA	False	NA	NA	NA	23384466	23384912	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_23384500_23384900
H1_mix_00043466	chr19	+	1066	1	ISM	ENSG00000288920.1	ENST00000484897.4	2140	4	64066	733	44989	-733	mono-exon	FALSE	NA	NA	NA	NA	NA	384	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGCAATAATTATGAGTC	2469	False	NA	6	True	AATAAA	-32	NA	23827069	23828135	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_23827100_23828100
H1_mix_00043469	chr19	+	826	2	FSM	ENSG00000268362.6	ENST00000664197.1	819	2	-7	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAAGCATTTACTTTAG	-16	True	NA	NA	False	AATAAA	-20	NA	24033445	24037395	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_24033622_24036745
H1_mix_00043470	chr19	+	1062	5	FSM	ENSG00000268362.6	ENST00000669127.1	1062	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	13.8089644796415	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGTGATGTGACTCCATT	-16	True	NA	NA	False	NA	NA	NA	24033445	24058296	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_24033622_24042442_24042723_24046183_24046280_24049404_24049549_24057930
H1_mix_00043472	chr19	+	767	6	NIC	ENSG00000213096.11	novel	4244	5	NA	NA	50	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_5	39.3466644075454	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGTCCTCTCTAATTTT	-7	True	NA	15	True	AATAAA	-16	NA	24033454	24107352	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_24033622_24046183_24046280_24049404_24049549_24105939_24106067_24106547_24106644_24107215
H1_mix_00043473	chr19	+	3625	4	FSM	ENSG00000268362.6	ENST00000670058.1	3625	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	32.8734948958377	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTATTGAGACATTTATTT	48	True	NA	NA	False	NA	NA	NA	24033509	24061203	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_24033622_24046183_24046280_24049404_24049549_24057930
H1_mix_00043475	chr19	+	3908	2	FSM	ENSG00000213096.11	ENST00000616028.2	3886	2	-22	0	-22	0	multi-exon	FALSE	canonical	3	16	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAATTATGGAGTAAGT	NA	False	NA	NA	False	ATTAAA	-34	NA	24087137	24129961	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_24087338_24126253
H1_mix_00043476	chr19	+	4004	3	FSM	ENSG00000213096.11	ENST00000611359.3	3982	3	-22	0	-22	0	multi-exon	FALSE	canonical	3	14	junction_1	53	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAATTATGGAGTAAGT	NA	False	NA	NA	False	ATTAAA	-34	NA	24087137	24129961	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_24087338_24106547_24106644_24126253
H1_mix_00043477	chr19	+	4138	4	FSM	ENSG00000213096.11	ENST00000357002.5	4089	4	-49	0	-22	0	multi-exon	FALSE	canonical	3	33	junction_1	40.5490101262931	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGAGTAAGTATGTTTG	NA	False	NA	NA	False	AATAAA	-1	NA	24087137	24129968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_24087338_24105939_24106067_24106547_24106644_24126253
H1_mix_00043479	chr19	+	1643	4	FSM	ENSG00000267575.8	ENST00000653426.1	1631	4	-12	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	4.92160768674447	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGATGTGTTGGCTTGTAA	8379	False	NA	NA	False	AATAAA	-21	NA	27793430	27806782	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_27793610_27797753_27798177_27805604_27806186_27806322
H1_mix_00043485	chr19	+	748	2	FSM	ENSG00000105171.10	ENST00000586173.1	629	2	0	-119	0	119	multi-exon	FALSE	canonical	3	144	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATCTTCCCATCCCCATTG	-7	True	NA	NA	False	NA	NA	NA	29606282	29609361	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_29606326_29608656
H1_mix_00043491	chr19	+	2313	11	NIC	ENSG00000105173.14	novel	1954	12	NA	NA	-506	0	combination_of_known_splicesites	FALSE	canonical	3	47	junction_1	100.58434271794	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTATCAGTTGACAGTGT	NA	False	NA	-79	True	GGGGCT	-10	NA	29811484	29824212	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_29812153_29812688_29812777_29812968_29813038_29817136_29817283_29817405_29817542_29820701_29820849_29821721_29821818_29821995_29822131_29822239_29822352_29822445_29822604_29823654
H1_mix_00043492	chr19	+	2165	12	FSM	ENSG00000105173.14	ENST00000262643.8	1954	12	-243	32	-243	0	multi-exon	FALSE	canonical	3	240	junction_1	48.786090688106	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAATAAAGATAATACT	NA	False	NA	-11	True	NA	NA	NA	29811747	29824280	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_29812153_29812531_29812579_29812688_29812777_29812968_29813038_29817136_29817283_29817405_29817542_29820701_29820849_29821721_29821818_29821995_29822131_29822239_29822352_29822445_29822604_29823654
H1_mix_00043493	chr19	+	1680	10	FSM	ENSG00000105173.14	ENST00000444983.6	1680	10	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_7	27.13932957677	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTATCAGTTGACAGTGT	7	False	NA	-79	True	GGGGCT	-10	NA	29812653	29824212	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_29812777_29812968_29813038_29817136_29817283_29817405_29817542_29820701_29820849_29821721_29821818_29821995_29822131_29822239_29822352_29822445_29822604_29823654
H1_mix_00043494	chr19	+	1641	9	FSM	ENSG00000105173.14	ENST00000357943.9	1641	9	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_6	106.307263980407	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGCTGGTTTTATGAGCT	7	False	NA	17	True	AATAAA	-18	NA	29812653	29824308	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_29812777_29812968_29813038_29817136_29817283_29817405_29817542_29820701_29820849_29821721_29821818_29822239_29822352_29822445_29822604_29823654
H1_mix_00043496	chr19	+	2517	10	FSM	ENSG00000105176.18	ENST00000574110.5	2495	10	-22	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	97.3938168240446	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGTTGTGAACTTTAT	-17	True	NA	32	True	AGTAAA	-22	NA	29942238	30015704	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_29942665_29985222_29985302_29986281_29986418_30005360_30005453_30005650_30005709_30007469_30007639_30009004_30009354_30011093_30011237_30012284_30012532_30014886
H1_mix_00043497	chr19	+	3482	11	FSM	ENSG00000105176.18	ENST00000392271.6	3460	11	-22	0	-22	0	multi-exon	TRUE	canonical	3	259	junction_2	77.6237077187118	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTTTGAGCCTGTCTA	-39	True	NA	7	True	ATTAAA	-21	NA	29942216	30016612	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_29942665_29971192_29971228_29985222_29985302_29986281_29986418_30005360_30005453_30005650_30005709_30007469_30007639_30009004_30009354_30011093_30011237_30012284_30012532_30014886
H1_mix_00043498	chr19	+	1895	11	NIC	ENSG00000105176.18	novel	3460	11	NA	NA	5	-3	combination_of_known_junctions	FALSE	canonical	3	114	junction_10	115.646227781108	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAAAAATGTTGTGAACTT	-12	True	NA	29	True	AGTAAA	-19	NA	29942243	30015701	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_29942665_29971192_29971228_29985222_29985302_29986281_29986418_30005360_30005453_30005650_30005709_30007469_30007639_30009004_30009354_30011093_30011237_30012284_30012532_30015535
H1_mix_00043501	chr19	+	1067	1	FSM	ENSG00000266910.2	ENST00000587506.2	759	1	-249	-59	-249	59	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATACTAAACATGCGTGCT	NA	False	NA	-78	True	NA	NA	NA	30037173	30038240	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_30037200_30038200
H1_mix_00043502	chr19	+	3851	1	FSM	ENSG00000278875.1	ENST00000625085.1	1802	1	-95	-1954	-95	1954	mono-exon	FALSE	NA	NA	NA	NA	NA	287	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGTGATCTGCCCGCTTC	NA	False	NA	NA	False	NA	NA	NA	31364201	31368052	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_31364200_31368100
H1_mix_00043503	chr19	+	7804	7	FSM	ENSG00000168813.17	ENST00000355898.6	7716	7	0	-88	0	88	multi-exon	TRUE	canonical	3	72	junction_1	8.80814017448254	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGATTAGCAAACTAGGGC	-10	True	NA	NA	False	NA	NA	NA	32345609	32387755	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_32345784_32347244_32347339_32352828_32354958_32356615_32356734_32360503_32360619_32382466_32382602_32382716
H1_mix_00043505	chr19	+	7237	19	NIC	ENSG00000178904.19	novel	5978	19	NA	NA	-5	0	intron_retention	FALSE	canonical	3	9	junction_15	17.6925910419525	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAAGATGAGTGTCTTGC	-7	True	NA	NA	False	AGTAAA	-14	NA	32405764	32485887	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_32405910_32408216_32408357_32411238_32411373_32432715_32432807_32436445_32436568_32437193_32437340_32439111_32439236_32439775_32439911_32453144_32453277_32454938_32455041_32458099_32458174_32458350_32458510_32463365_32463489_32463868_32463981_32464727_32464785_32467473_32468814_32477521_32477655_32480398_32480558_32482078
H1_mix_00043521	chr19	+	2208	4	FSM	ENSG00000124302.13	ENST00000438847.7	2133	4	-78	3	-60	0	multi-exon	FALSE	canonical	3	41	junction_1	3.39934634239519	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCGGTGTGTACTCTGTG	NA	False	NA	12	True	AATAAA	-17	NA	33621892	33773506	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_33622297_33689175_33689392_33771412_33771451_33771956
H1_mix_00043522	chr19	+	2276	5	FSM	ENSG00000124302.13	ENST00000650847.1	2225	5	-51	0	-51	0	multi-exon	FALSE	canonical	3	9	junction_1	17.2626765016321	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCGGTGTGTACTCTGTG	NA	False	NA	12	True	AATAAA	-17	NA	33621901	33773506	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_33622297_33667766_33667844_33689175_33689392_33771412_33771451_33771956
H1_mix_00043523	chr19	+	841	3	NNC	ENSG00000124302.13	novel	683	3	NA	NA	-5	8327	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	14	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTTGAAATACGTTACC	12	False	NA	110	True	GATAAA	-17	NA	33621965	33752811	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_33622297_33689175_33689392_33752517
H1_mix_00043526	chr19	+	3933	7	FSM	ENSG00000153885.15	ENST00000683859.1	3909	7	-24	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	19.919978804094	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCTAGCCCTTGGTTTG	8	False	NA	78	True	AATAAA	-22	NA	33796845	33815761	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_33796988_33798667_33798767_33800427_33800521_33801166_33801343_33806862_33807008_33811246_33811553_33812789
H1_mix_00043529	chr19	+	3424	11	FSM	ENSG00000257103.9	ENST00000433627.9	3424	11	0	0	0	0	multi-exon	TRUE	canonical	3	309	junction_10	333.46813940765	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCGTCAAAGTTCTTTCT	42	False	NA	23	True	AATAAA	-17	NA	34172567	34229288	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_34172764_34194477_34194642_34196633_34196764_34208928_34209052_34215123_34215301_34215595_34215662_34219390_34219574_34219705_34219878_34221506_34221739_34226407_34226465_34227364
H1_mix_00043537	chr19	+	4125	18	FSM	ENSG00000105220.17	ENST00000356487.11	4125	18	0	0	0	0	multi-exon	TRUE	canonical	3	1048	junction_8	116.322068110104	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGCTTTGTGTGTTT	5	True	NA	31	True	AATAAA	-20	NA	34365195	34402413	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_34365389_34366344_34366436_34366782_34366852_34368582_34368703_34377502_34377587_34377734_34377882_34378933_34379006_34379517_34379563_34381465_34381520_34393247_34393309_34393727_34393772_34393913_34394067_34396300_34396431_34396580_34396658_34399206_34399336_34399555_34399632_34399718_34399786_34399900
H1_mix_00043547	chr19	+	4714	1	ISM	ENSG00000142279.13	ENST00000590071.7	13545	8	20368	5465	19598	-5465	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGCTCTTTCCCGTGAAA	NA	False	NA	NA	False	AATAAA	-44	NA	34502125	34506839	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_34502100_34506800
H1_mix_00043552	chr19	+	2611	5	FSM	ENSG00000089335.22	ENST00000423823.6	2590	5	-21	0	6	0	multi-exon	FALSE	canonical	0	0	junction_1	93.6386004807846	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAACTCTTTCTCTGTGAC	-21	True	NA	24	True	AATAAA	-34	NA	34677667	34686391	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_34677857_34678736_34678814_34682776_34682898_34683154_34683239_34684251
H1_mix_00043553	chr19	+	3468	4	NIC	ENSG00000089335.22	novel	2893	5	NA	NA	5	0	intron_retention	FALSE	canonical	3	46	junction_2	81.3060063381954	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAACTCTTTCTCTGTGAC	5	True	NA	24	True	AATAAA	-34	NA	34677693	34686391	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_34678814_34682776_34682898_34683151_34683239_34684251
H1_mix_00043554	chr19	+	2864	5	FSM	ENSG00000089335.22	ENST00000613363.4	2893	5	29	0	6	0	multi-exon	FALSE	canonical	3	31	junction_1	88.8126539407533	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTTTCTCTGTGACTGT	-21	True	NA	27	True	AATAAA	-37	NA	34677667	34686394	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_34678104_34678736_34678814_34682776_34682898_34683151_34683239_34684251
H1_mix_00043555	chr19	+	2623	5	FSM	ENSG00000089335.22	ENST00000457781.6	2600	5	-23	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	59.9103496901829	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTCTGTGACTGTTTG	NA	False	NA	30	True	AATAAA	-40	NA	34677638	34686397	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_34677834_34678736_34678814_34682776_34682898_34683154_34683239_34684251
H1_mix_00043557	chr19	+	3839	3	FSM	ENSG00000089335.22	ENST00000509196.1	3839	3	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_2	14.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAACTCTTTCTCTGTGAC	3443	False	NA	24	True	AATAAA	-34	NA	34681282	34686391	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_34682898_34683154_34683239_34684251
H1_mix_00043558	chr19	+	3257	5	NIC	ENSG00000197841.15	novel	567	5	NA	NA	-495	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	15.116216457831	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTCACTGTGACTATTT	NA	False	NA	24	True	AATAAA	-40	NA	34733659	34742872	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_34734361_34734969_34735047_34739147_34739269_34739525_34739622_34740610
H1_mix_00043561	chr19	+	2592	5	FSM	ENSG00000168661.15	ENST00000303586.11	2579	5	-13	0	-13	0	multi-exon	FALSE	canonical	3	10	junction_3	10.0591997693654	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACCACTGCTGAACTTCA	NA	False	NA	2	True	AATAAA	-16	NA	34926889	34945164	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_34927217_34929883_34929957_34931842_34931994_34933624_34933724_34943222
H1_mix_00043563	chr19	+	1002	6	FSM	ENSG00000089351.15	ENST00000424536.2	808	6	-194	0	-61	0	multi-exon	FALSE	canonical	3	901	junction_5	54.1649333055991	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGCCCCTCCCTTCGTAA	322	False	NA	28	True	AGTAAA	-25	NA	35000261	35010639	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35000487_35009118_35009330_35009422_35009444_35009887_35009973_35010091_35010196_35010283
H1_mix_00043567	chr19	+	2659	20	FSM	ENSG00000089351.15	ENST00000317991.10	2659	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	311.834479142816	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGCTGTGCCTGTGGG	18	True	NA	13	True	AATAAA	-13	NA	35000322	35026469	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35000487_35009118_35009330_35009422_35009444_35009887_35009973_35010091_35010196_35010283_35010380_35011473_35011555_35013255_35013369_35013540_35013692_35014188_35014388_35015823_35015968_35019190_35019310_35019390_35019534_35021501_35021606_35021690_35021865_35021950_35022039_35022899_35022912_35023235_35023344_35023426_35023548_35026048
H1_mix_00043569	chr19	+	2541	19	NNC	ENSG00000089351.15	novel	2647	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	219.184156463109	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGCTGTGCCTGTGGG	72	False	NA	13	True	AATAAA	-13	NA	35000425	35026469	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_35000487_35009118_35009330_35009422_35009444_35009887_35009973_35010091_35010196_35010283_35010380_35011473_35011555_35013255_35013369_35013540_35013692_35014188_35014387_35015825_35015968_35019190_35019310_35019390_35019534_35021501_35021606_35021690_35021865_35021950_35022039_35023235_35023344_35023426_35023548_35026048
H1_mix_00043581	chr19	+	362	4	ISM	ENSG00000266964.6	ENST00000590462.1	620	5	582	5	582	0	3prime_fragment	FALSE	canonical	3	159	junction_3	16.062378404209	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCACTTTGTCGGTCTCGG	0	True	NA	21	True	AATAAA	-18	NA	35141446	35143050	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_35141573_35142471_35142522_35142719_35142772_35142916
H1_mix_00043582	chr19	+	1419	8	Fusion	ENSG00000221946.8_ENSG00000266964.6	novel	708	6	NA	NA	582	0	intron_retention	FALSE	canonical	3	132	junction_6	20.5108234245001	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTCTGTGTGTTCTCAT	0	True	NA	24	True	AATAAA	-24	NA	35141446	35154302	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_+_35141573_35142471_35142522_35142719_35143365_35148693_35148724_35151253_35151329_35151439_35151483_35151632_35151674_35153893
H1_mix_00043589	chr19	+	1586	8	FSM	ENSG00000089327.15	ENST00000342879.7	1580	8	-6	0	0	0	multi-exon	FALSE	canonical	3	673	junction_5	41.0499944070194	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAGGATCTCTGATCATT	18	True	NA	16	True	AGTAAA	-16	NA	35154766	35169880	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35155612_35157420_35157502_35158343_35158401_35160708_35160802_35164155_35164246_35166141_35166172_35166250_35166326_35169565
H1_mix_00043590	chr19	+	892	9	FSM	ENSG00000089327.15	ENST00000423817.7	892	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	242.966432866765	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCAGGATCTCTGATCAT	0	True	NA	15	True	AGTAAA	-15	NA	35154941	35169879	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35155033_35155550_35155612_35157420_35157502_35158343_35158401_35160708_35160802_35164155_35164246_35166141_35166172_35166250_35166326_35169565
H1_mix_00043592	chr19	+	2848	9	FSM	ENSG00000105699.17	ENST00000602122.5	2480	9	-265	-103	-203	101	multi-exon	FALSE	canonical	3	251	junction_6	476.42306566748	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCGGGAGGAAGAGACCCA	NA	False	NA	128	True	NA	NA	NA	35248126	35268065	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35249132_35250314_35250660_35258944_35259065_35262545_35262693_35266358_35266533_35266678_35266739_35266838_35266968_35267108_35267735_35267823
H1_mix_00043593	chr19	+	2274	10	FSM	ENSG00000105699.17	ENST00000621372.4	2274	10	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_4	509.800493536321	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGCTCTGGAGAGAACCA	268	False	NA	23	True	AATAAA	-11	NA	35248655	35267960	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35249132_35250314_35250660_35258944_35259065_35261924_35261982_35262545_35262693_35266358_35266533_35266678_35266739_35266835_35266968_35267108_35267735_35267823
H1_mix_00043594	chr19	+	2334	8	FSM	ENSG00000105699.17	ENST00000360798.7	1963	8	-373	2	0	0	multi-exon	FALSE	canonical	3	239	junction_3	494.473374781036	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGCTCTGGAGAGAACCA	4	True	NA	23	True	AATAAA	-11	NA	35248391	35267960	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35249132_35250314_35250660_35258944_35259065_35266358_35266533_35266678_35266739_35266835_35266968_35267108_35267735_35267823
H1_mix_00043595	chr19	+	2112	9	FSM	ENSG00000105699.17	ENST00000354900.7	2105	9	-7	0	0	0	multi-exon	FALSE	canonical	3	1000	junction_3	245.166493173517	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTGGAGAGAACCATTTG	15	True	NA	27	True	AATAAA	-15	NA	35248764	35267964	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35249132_35250314_35250660_35258944_35259065_35262545_35262693_35266358_35266533_35266678_35266739_35266835_35266968_35267108_35267735_35267823
H1_mix_00043597	chr19	+	1539	9	FSM	ENSG00000105698.16	ENST00000343550.9	1523	9	-16	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	33.7988073014419	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTCTGCTTGTGTGTTTG	7	True	NA	34	True	AATAAA	-22	NA	35268961	35279815	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35269164_35269445_35269493_35269580_35269700_35270446_35270598_35270717_35270806_35271082_35271142_35278697_35278793_35278945_35279075_35279166
H1_mix_00043601	chr19	+	2993	3	FSM	ENSG00000105698.16	ENST00000600898.1	848	3	-2145	0	-907	0	multi-exon	FALSE	canonical	3	111	junction_1	3	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCCCCAGCCCTTAGCAC	6215	False	NA	NA	False	NA	NA	NA	35276069	35279307	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35278793_35278945_35279075_35279166
H1_mix_00043602	chr19	+	2742	2	FSM	ENSG00000105698.16	ENST00000594264.1	2742	2	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGCCTTGTCTGCTTGTGT	7122	False	NA	29	True	AATAAA	-17	NA	35276976	35279810	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35279075_35279166
H1_mix_00043603	chr19	+	836	6	FSM	ENSG00000105677.12	ENST00000392204.6	935	6	-30	129	0	0	multi-exon	FALSE	canonical	3	1924	junction_4	90.4645787034903	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCAGCACTTTGGCCCTG	-19	True	NA	NA	False	GGGGCT	-6	NA	35545599	35547397	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35545958_35546525_35546586_35546671_35546809_35546944_35547030_35547118_35547241_35547323
H1_mix_00043609	chr19	+	2779	18	FSM	ENSG00000249115.9	ENST00000585968.5	2762	18	-17	0	0	0	multi-exon	FALSE	canonical	3	154	junction_9	30.8984271892303	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACAGTGTAGGTTGGGGGT	-29	True	NA	-44	True	NA	NA	NA	35612734	35623557	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35612893_35613729_35613793_35613867_35613901_35614034_35614060_35615041_35615148_35615226_35615387_35617123_35617194_35617286_35617370_35617854_35617913_35618070_35618196_35618401_35618466_35618568_35618700_35618886_35619050_35619423_35619505_35619612_35620124_35620194_35620328_35622600_35622734_35622875
H1_mix_00043611	chr19	+	617	6	FSM	ENSG00000249115.9	ENST00000592291.5	526	6	-91	0	-55	0	multi-exon	FALSE	canonical	3	5	junction_1	90.6986218197388	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCGGCTGCAGAATCAACT	NA	False	NA	NA	False	NA	NA	NA	35612679	35615342	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35612893_35613668_35613793_35613867_35613901_35614034_35614060_35615041_35615148_35615226
H1_mix_00043614	chr19	+	1618	9	FSM	ENSG00000126254.12	ENST00000588161.5	1609	9	-9	0	-9	0	multi-exon	FALSE	canonical	2	12	junction_4	277.748734245541	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGCTGGGCATGGAAGC	5	True	NA	22	True	AATAAA	-18	NA	35629020	35637686	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35629282_35629519_35629674_35631139_35631225_35631330_35631406_35633100_35633253_35633686_35634020_35634255_35634374_35637157_35637353_35637441
H1_mix_00043615	chr19	+	1570	9	NIC	ENSG00000126254.12	novel	1487	9	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	348	junction_4	168.813090058206	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTGGCTGGGCATGGAA	20	True	NA	20	True	AATAAA	-16	NA	35629069	35637684	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_35629282_35629519_35629674_35631139_35631225_35631330_35631406_35633097_35633253_35633686_35634020_35634255_35634374_35637157_35637353_35637441
H1_mix_00043622	chr19	+	737	4	FSM	ENSG00000205155.8	ENST00000222266.2	603	4	-145	11	-126	0	multi-exon	FALSE	canonical	3	74	junction_1	544.456303725714	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACTTTCGATACTGACTT	404	False	NA	13	True	AATAAA	-6	NA	35745473	35746993	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35745701_35745872_35745992_35746418_35746524_35746707
H1_mix_00043624	chr19	+	1124	4	FSM	ENSG00000205155.8	ENST00000587708.7	1124	4	0	0	0	0	multi-exon	FALSE	canonical	3	967	junction_1	145.568616886409	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCCTTGACCATCCATC	14	True	NA	24	True	AATAAA	-26	NA	35745650	35747519	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35745701_35745834_35745992_35746418_35746524_35746707
H1_mix_00043637	chr19	+	2999	8	ISM	ENSG00000004777.19	ENST00000588248.6	2004	10	252	-23	0	0	intron_retention	FALSE	canonical	3	11	junction_3	20.3520043640093	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGAAGTCGTTCTGGG	173	False	NA	21	True	AATAAA	-15	NA	35782624	35788822	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_35782680_35782761_35782870_35784171_35784318_35784952_35785107_35785188_35785335_35785408_35785484_35786412_35787073_35787167
H1_mix_00043639	chr19	+	2727	6	ISM	ENSG00000004777.19	ENST00000378944.9	4219	21	9317	0	0	0	3prime_fragment	FALSE	canonical	3	21	junction_5	15.3544781741354	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGAAGTCGTTCTGGG	46	False	NA	21	True	AATAAA	-15	NA	35784831	35788822	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_35785107_35785188_35785335_35785408_35785484_35786412_35787073_35787167_35787560_35787643
H1_mix_00043642	chr19	+	4126	15	FSM	ENSG00000126259.20	ENST00000360202.10	2980	15	-1146	0	-96	0	multi-exon	TRUE	canonical	3	23	junction_8	7.2702917999997	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTCTTAGGGAGTCTAC	3518	False	NA	11	True	AATAAA	-19	NA	35855764	35867136	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35857181_35857344_35857495_35858407_35858558_35858703_35858865_35859480_35859632_35860296_35860403_35860518_35860668_35860908_35861037_35861121_35861255_35861540_35861642_35861804_35862025_35862492_35862598_35862926_35863037_35864647_35864714_35866156
H1_mix_00043645	chr19	+	2387	17	FSM	ENSG00000105290.13	ENST00000221891.9	2370	17	-58	41	-47	0	multi-exon	FALSE	canonical	3	34	junction_12	33.4736370148211	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCCCTACTAACATCCCA	7	False	NA	-25	True	NA	NA	NA	35868515	35879751	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35868784_35869666_35869811_35870895_35871029_35871236_35871350_35871611_35871746_35871857_35872037_35872482_35872614_35873638_35873714_35874503_35874663_35874740_35874870_35876516_35876617_35877717_35877826_35878081_35878109_35878583_35878655_35878889_35878953_35879073_35879218_35879342
H1_mix_00043648	chr19	+	2079	15	NNC	ENSG00000105290.13	novel	1179	8	NA	NA	107	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_11	46.8473421806163	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGTCTGAGTCTCTGTG	856	False	NA	16	True	AATAAA	-17	NA	35870560	35879792	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_35870651_35870895_35871029_35871236_35871350_35871611_35871746_35871857_35872037_35872482_35872614_35873638_35873714_35874503_35874663_35874740_35874870_35876516_35876617_35877717_35877826_35878583_35878655_35878889_35878953_35879073_35879218_35879342
H1_mix_00043661	chr19	+	4721	32	FSM	ENSG00000075702.19	ENST00000679682.1	4702	32	-19	0	-3	0	multi-exon	FALSE	canonical	0	0	junction_11	73.8674460352252	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGAGGAATGGTTCCTGG	NA	False	NA	8	True	AATAAA	-8	NA	36054877	36105098	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_36055149_36058779_36058872_36059967_36060031_36065957_36066016_36066256_36066428_36067305_36067444_36067827_36068011_36071555_36071717_36073356_36073532_36081432_36081571_36083062_36083242_36084652_36084745_36086686_36086813_36089037_36089106_36089184_36089307_36090444_36090521_36091199_36091312_36091401_36091466_36092688_36092812_36094030_36094165_36097026_36097080_36099398_36099618_36100747_36100876_36101213_36101318_36101663_36101775_36102013_36102152_36102736_36102852_36102947_36103075_36103155_36103208_36103342_36103982_36104517_36104676_36104767
H1_mix_00043663	chr19	+	4669	32	FSM	ENSG00000075702.19	ENST00000680590.1	4655	32	-14	0	2	0	multi-exon	TRUE	canonical	2	5	junction_22	73.7727195643829	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTCCTGGTGTCTGTTTG	-20	True	NA	18	True	AATAAA	-18	NA	36054882	36105108	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_36055149_36058779_36058872_36059967_36060031_36065957_36066016_36066256_36066428_36067305_36067444_36067827_36068011_36071555_36071717_36073341_36073532_36081432_36081571_36083062_36083189_36084652_36084745_36086686_36086813_36089037_36089106_36089184_36089307_36090444_36090521_36091199_36091312_36091401_36091466_36092688_36092812_36094030_36094165_36097026_36097080_36099398_36099618_36100751_36100876_36101213_36101318_36101663_36101775_36102013_36102152_36102751_36102852_36102947_36103075_36103155_36103208_36103342_36103982_36104517_36104676_36104767
H1_mix_00043666	chr19	+	4643	32	FSM	ENSG00000075702.19	ENST00000270301.12	4634	32	-9	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	66.0006621856858	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGGTTCCTGGTGTCTGT	10	True	NA	15	True	AATAAA	-15	NA	36054962	36105105	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_36055149_36058779_36058872_36059967_36060031_36065957_36066016_36066256_36066428_36067305_36067444_36067827_36068011_36071555_36071717_36073341_36073532_36081432_36081571_36083062_36083242_36084652_36084745_36086686_36086813_36089037_36089106_36089184_36089307_36090444_36090521_36091199_36091312_36091401_36091466_36092688_36092812_36094030_36094165_36097026_36097080_36099398_36099618_36100747_36100876_36101213_36101318_36101663_36101775_36102013_36102152_36102751_36102852_36102947_36103075_36103155_36103208_36103342_36103982_36104517_36104676_36104767
H1_mix_00043667	chr19	+	5996	30	FSM	ENSG00000075702.19	ENST00000587391.6	5973	30	-23	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	91.3729470783795	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTCCTGGTGTCTGTTTG	-13	True	NA	18	True	AATAAA	-18	NA	36054939	36105108	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_36055149_36058779_36058872_36059967_36060031_36065957_36066016_36066256_36066428_36067305_36067444_36067827_36068011_36071555_36071717_36073341_36073532_36081432_36081571_36081793_36081936_36083062_36083242_36084652_36084745_36086686_36086813_36089037_36089106_36089184_36089307_36090444_36090521_36091199_36091312_36091401_36091466_36092688_36092812_36094030_36094165_36097026_36097080_36099398_36099618_36100747_36100876_36101213_36102852_36102947_36103075_36103155_36103208_36103342_36103982_36104517_36104676_36104767
H1_mix_00043673	chr19	+	2545	7	FSM	ENSG00000075702.19	ENST00000680997.1	2545	7	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_4	32.6313584693551	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGGTATTTTAAGCGAATA	458	False	NA	-21	True	NA	NA	NA	36101345	36105069	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_36101775_36102013_36102852_36102947_36103075_36103155_36103208_36103342_36103982_36104517_36104676_36104767
H1_mix_00043681	chr19	+	630	3	FSM	ENSG00000105254.12	ENST00000468156.1	630	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	834.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTAGAGGACTTCATGA	1318	False	NA	19	True	ATTAAA	-20	NA	36121894	36125945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_36122174_36125450_36125524_36125667
H1_mix_00043685	chr19	+	1414	11	NIC	ENSG00000126247.11	novel	1471	11	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	105	junction_1	244.577676822722	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGATCTGCCTCCTGATC	-25	True	NA	26	True	AATAAA	-23	NA	36140075	36150352	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_36140158_36140999_36141221_36142299_36142334_36142651_36142742_36142908_36142967_36143063_36143129_36145805_36145875_36145975_36146055_36146195_36146313_36149577_36149637_36149812
H1_mix_00043687	chr19	+	3727	4	FSM	ENSG00000167635.12	ENST00000443387.3	3347	4	-380	0	124	0	multi-exon	FALSE	canonical	3	376	junction_1	357.592256938293	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAATCTGTTTTAATTAT	-3	True	NA	16	True	ATTAAA	-20	NA	36214725	36238768	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_36215197_36218121_36218196_36228747_36228820_36235658
H1_mix_00043688	chr19	+	2674	2	FSM	ENSG00000267053.8	ENST00000660190.2	2674	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	1371	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGAGTATCAGCCTCTCC	NA	False	NA	NA	False	AATAAA	-15	NA	36309594	36312997	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_36311793_36312521
H1_mix_00043694	chr19	+	2391	4	FSM	ENSG00000267254.7	ENST00000657461.1	3024	4	0	633	0	-633	multi-exon	FALSE	canonical	3	9	junction_3	0.471404520791032	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGACTCACCACAACCTCCA	NA	False	NA	NA	False	NA	NA	NA	36797501	36829634	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_36797812_36801202_36801241_36801875_36801934_36827649
H1_mix_00043695	chr19	+	881	3	FSM	ENSG00000267254.7	ENST00000663523.1	881	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCACGCCTGTAATCCCA	10	True	NA	88	True	AATAAA	-24	NA	36797533	36828194	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_36797812_36801875_36801934_36827649
H1_mix_00043696	chr19	+	3036	3	FSM	ENSG00000251247.12	ENST00000420450.6	2959	3	-78	1	-78	0	multi-exon	FALSE	canonical	3	41	junction_2	8.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGATGGCCCCTTTTCA	427	False	NA	11	True	ATTAAA	-23	NA	36850797	36879574	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_36850969_36851829_36851905_36876784
H1_mix_00043697	chr19	+	474	4	NNC	ENSG00000251247.12	novel	3103	4	NA	NA	8	-11008	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	22.3755819291179	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGTTTGCTAGAGTTT	20	True	NA	NA	False	CATAAA	-21	NA	36850902	36866046	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_36850969_36851829_36851905_36862916_36863012_36865808
H1_mix_00043700	chr19	+	3638	5	FSM	ENSG00000197050.11	ENST00000337995.4	3639	5	0	1	0	-1	multi-exon	FALSE	canonical	3	38	junction_2	3.64005494464026	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTACCTGGAAGTGGG	-13	True	NA	62	True	AATAAA	-19	NA	37078432	37130367	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_37078571_37080344_37080389_37089038_37089128_37090994_37091122_37127127
H1_mix_00043701	chr19	+	961	5	FSM	ENSG00000181666.19	ENST00000589218.5	958	5	-3	0	-3	0	multi-exon	FALSE	canonical	3	7	junction_4	43.9914764471483	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTGAGTTCATGCCAC	-4	True	NA	NA	False	AAGAAA	-20	NA	37317896	37329105	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37328578
H1_mix_00043702	chr19	+	2868	6	FSM	ENSG00000181666.19	ENST00000544914.5	2854	6	-14	0	-3	0	multi-exon	FALSE	canonical	3	12	junction_4	37.451835736049	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTTCAATTGTCAGTGTA	-4	True	NA	31	True	AATAAA	-21	NA	37317896	37364446	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37347776_37347873_37362108
H1_mix_00043703	chr19	+	2995	7	NIC	ENSG00000181666.19	novel	3464	11	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_4	29.1742847194047	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTTCAATTGTCAGTGTA	-4	True	NA	31	True	AATAAA	-21	NA	37317896	37364446	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37347189_37347317_37347776_37347873_37362108
H1_mix_00043704	chr19	+	1056	6	NNC	ENSG00000181666.19	novel	575	6	NA	NA	1	612	at_least_one_novel_splicesite	TRUE	canonical	3	9	junction_4	48.1439508141989	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCCTCAGTGGTTTTTT	0	True	NA	NA	False	ATTAAA	-28	NA	37317900	37329717	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37328984_37329065_37329171
H1_mix_00043706	chr19	+	2789	5	FSM	ENSG00000181666.19	ENST00000392153.8	2785	5	0	-4	0	4	multi-exon	FALSE	canonical	3	30	junction_1	34.8164831653055	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATTGTCAGTGTATCCTC	-14	True	NA	36	True	AATAAA	-26	NA	37334648	37364451	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_37334783_37335168_37335258_37347189_37347317_37347776_37347873_37362108
H1_mix_00043712	chr19	+	6705	4	FSM	ENSG00000188227.14	ENST00000445217.5	6712	4	5	2	5	0	multi-exon	FALSE	canonical	3	9	junction_3	11.6141675934562	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGCCTTGAAAATGTTTC	NA	False	NA	NA	False	AATAAA	-24	NA	37523409	37543333	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_37523455_37532355_37532483_37533307_37533404_37536896
H1_mix_00043715	chr19	+	7925	22	NIC	ENSG00000105738.11	novel	8004	22	NA	NA	39	0	combination_of_known_junctions	TRUE	canonical	3	6	junction_17	19.2648329047535	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTGTGTTCACTTTT	38	True	NA	14	True	AATAAA	-14	NA	37907283	38208369	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_37907359_38029088_38029157_38081255_38083100_38088720_38088852_38099961_38100151_38101051_38101227_38106536_38106641_38110226_38110385_38119305_38119883_38130497_38130773_38141183_38141436_38142572_38142711_38152839_38152968_38162252_38162372_38164478_38164907_38182518_38182741_38192144_38192311_38193539_38193781_38198388_38198533_38201861_38201998_38204126_38204209_38206096
H1_mix_00043722	chr19	+	374	4	FSM	ENSG00000167644.12	ENST00000301246.10	374	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	10.9645894689324	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGACTGGTCAGCGTGGTG	25	True	NA	24	True	ATTAAA	-18	NA	38304250	38305006	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_38304284_38304374_38304491_38304623_38304687_38304844
H1_mix_00043723	chr19	+	5721	3	FSM	ENSG00000099337.5	ENST00000263372.5	5721	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	7	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTACTATGCTTTTTC	-4	True	NA	29	True	AATAAA	-24	NA	38319844	38332076	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_38320273_38326592_38326989_38327179
H1_mix_00043735	chr19	+	773	8	FSM	ENSG00000178982.10	ENST00000593149.5	760	8	-13	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	732.079509454585	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTACTGTCTCCTCCCTGG	0	True	NA	24	True	AATAAA	-16	NA	38619081	38636953	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_38619224_38620336_38620436_38624076_38624198_38626027_38626103_38632429_38632497_38632600_38632679_38634992_38635119_38636888
H1_mix_00043736	chr19	+	780	7	FSM	ENSG00000178982.10	ENST00000614624.4	780	7	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	756.63017533153	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTGTCTCCTCCCTGGCT	0	True	NA	26	True	AATAAA	-18	NA	38619081	38636955	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_38619328_38624076_38624198_38626027_38626103_38632429_38632497_38632600_38632679_38634992_38635119_38636888
H1_mix_00043738	chr19	+	774	8	FSM	ENSG00000178982.10	ENST00000248342.9	772	8	-2	0	0	0	multi-exon	FALSE	canonical	3	1657	junction_7	215.675493200658	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTACTGTCTCCTCCCTGGC	-10	True	NA	25	True	AATAAA	-17	NA	38619185	38636954	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_38619328_38620336_38620436_38624076_38624198_38626027_38626103_38632429_38632497_38632600_38632679_38634992_38635119_38636888
H1_mix_00043739	chr19	+	670	7	FSM	ENSG00000178982.10	ENST00000592558.1	670	7	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_5	751.043940126009	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTACTGTCTCCTCCCTGG	15	True	NA	24	True	AATAAA	-16	NA	38619210	38636953	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_38619328_38620336_38620436_38624076_38624198_38626027_38626103_38632429_38632497_38634992_38635119_38636888
H1_mix_00043741	chr19	+	6700	21	FSM	ENSG00000130402.13	ENST00000424234.7	2923	21	-39	-3738	-28	1682	multi-exon	FALSE	canonical	3	71	junction_7	33.035246328732	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAATGGAGGCTCAAAGA	NA	False	NA	NA	False	NA	NA	NA	38647620	38733271	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_38647908_38700599_38700715_38701001_38701122_38704933_38705021_38706043_38706132_38708116_38708196_38709394_38709477_38711275_38711362_38714468_38714562_38717085_38717317_38717926_38718075_38721537_38721689_38723613_38723723_38723936_38724078_38724156_38724340_38724430_38724566_38725723_38725904_38726956_38727104_38727945_38728027_38728995_38729155_38729273
H1_mix_00043742	chr19	+	4969	21	FSM	ENSG00000130402.13	ENST00000440400.2	4958	21	-11	0	0	0	multi-exon	FALSE	canonical	3	14	junction_18	50.9682253958287	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAGTCAGTTTCCTTAC	0	True	NA	NA	False	AATATA	-11	NA	38647648	38731583	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_38647908_38700599_38700715_38701001_38701122_38704933_38705021_38706043_38706132_38708116_38708196_38709394_38709477_38711275_38711362_38714468_38714562_38717085_38717317_38717926_38718075_38721537_38721689_38723613_38723723_38723936_38724078_38724156_38724340_38724430_38724566_38725723_38725904_38726956_38727104_38728315_38728382_38728995_38729155_38729273
H1_mix_00043743	chr19	+	4990	21	FSM	ENSG00000130402.13	ENST00000252699.7	4990	21	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_7	37.0619413954531	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTTTCCTTACAGTCTA	0	True	NA	NA	False	AATATA	-17	NA	38647648	38731589	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_38647908_38700599_38700715_38701001_38701122_38704933_38705021_38706043_38706132_38708116_38708196_38709394_38709477_38710256_38710343_38714468_38714562_38717085_38717317_38717926_38718075_38721537_38721689_38723613_38723723_38723936_38724078_38724156_38724340_38724430_38724566_38725723_38725904_38726956_38727104_38727945_38728027_38728995_38729155_38729273
H1_mix_00043744	chr19	+	2748	3	FSM	ENSG00000130402.13	ENST00000477174.1	544	3	-39	-2165	-39	-3	multi-exon	FALSE	canonical	3	32	junction_1	77	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTCAGTTTCCTTACAGT	3539	False	NA	NA	False	AATATA	-14	NA	38728105	38731586	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_38728382_38728995_38729155_38729273
H1_mix_00043745	chr19	+	1378	1	FSM	ENSG00000267892.1	ENST00000602255.1	1580	1	22	180	22	-180	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTACTGAAATTCTCAGAAA	2081	False	NA	NA	False	NA	NA	NA	38738305	38739683	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_38738300_38739700
H1_mix_00043749	chr19	+	2217	5	FSM	ENSG00000104825.17	ENST00000509705.3	2200	5	-17	0	-6	0	multi-exon	FALSE	canonical	3	31	junction_1	167.023014881183	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCAGACTGATCTTGTCT	-14	True	NA	20	True	AATAAA	-25	NA	38899962	38908893	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_38900212_38905070_38905121_38905201_38905536_38907220_38907310_38907398
H1_mix_00043750	chr19	+	1114	6	NIC	ENSG00000104825.17	novel	1192	6	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	156.578925785049	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAGACCAGACTGATCTT	14	True	NA	16	True	AATAAA	-21	NA	38899990	38908889	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_38900212_38905070_38905121_38905201_38905536_38907220_38907310_38907398_38907660_38908730
H1_mix_00043754	chr19	+	2831	10	NIC	ENSG00000130669.17	novel	3025	11	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	196	junction_2	84.3411649123098	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCTGTGTGCGATGTG	-10	True	NA	13	True	ATTAAA	-14	NA	39125781	39179401	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_39125920_39168229_39168303_39169531_39169758_39172917_39173377_39173575_39174011_39174930_39175065_39175311_39175439_39176589_39176716_39177674_39177810_39178423
H1_mix_00043757	chr19	+	3025	11	FSM	ENSG00000130669.17	ENST00000593690.5	3025	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	171.626920965215	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCTGTGTGCGATGTG	22	False	NA	13	True	ATTAAA	-14	NA	39125813	39179401	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_39125920_39168229_39168313_39168624_39168841_39169531_39169758_39172917_39173377_39173575_39174011_39174930_39175065_39175311_39175439_39176589_39176716_39177674_39177810_39178423
H1_mix_00043762	chr19	+	4860	13	ISM	ENSG00000179134.16	ENST00000610417.5	4680	14	23	4	2	-2	intron_retention	FALSE	canonical	3	544	junction_2	105.987420637231	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAATTCTGACCTTCGTTGT	8	True	NA	5	True	AAAACA	-12	NA	39342443	39385696	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_39342577_39354005_39354067_39356688_39357090_39369654_39370126_39375649_39375890_39376436_39376547_39376704_39376792_39377484_39377825_39378503_39378590_39379965_39380085_39380586_39380786_39380989_39381114_39383207
H1_mix_00043763	chr19	+	4803	12	ISM	ENSG00000179134.16	ENST00000598913.5	2877	13	0	-1510	0	0	intron_retention	FALSE	canonical	3	249	junction_1	174.393162728966	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGACCTTCGTTGTGC	6	True	NA	7	True	AAAACA	-14	NA	39342441	39385698	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_39342577_39356688_39357090_39369654_39370126_39375649_39375890_39376436_39376547_39376704_39376792_39377484_39377825_39378503_39378590_39379965_39380085_39380586_39380786_39380989_39381114_39383207
H1_mix_00043764	chr19	+	4573	13	NIC	ENSG00000179134.16	novel	4680	14	NA	NA	-5	-2	combination_of_known_junctions	FALSE	canonical	3	249	junction_1	178.420130746381	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAATTCTGACCTTCGTTGT	27	True	NA	5	True	AAAACA	-12	NA	39342462	39385696	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_39342577_39356688_39357090_39369654_39370126_39375649_39375890_39376436_39376547_39376704_39376792_39377484_39377825_39378503_39378590_39379965_39380085_39380586_39380786_39380989_39381114_39383207_39383292_39383498
H1_mix_00043765	chr19	+	4723	15	NNC	ENSG00000179134.16	novel	4519	16	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_2	278.257698795156	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTCTGACCTTCGTTGTG	32	False	NA	6	True	AAAACA	-13	NA	39342467	39385697	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_39342577_39354005_39354067_39355057_39355151_39356688_39357090_39369654_39370126_39375649_39375890_39376436_39376547_39376704_39376792_39377484_39377825_39378503_39378590_39379965_39380085_39380586_39380786_39380989_39381114_39383207_39383292_39383498
H1_mix_00043766	chr19	+	4751	15	NIC	ENSG00000179134.16	novel	4519	16	NA	NA	2	8	combination_of_known_splicesites	FALSE	canonical	3	56	junction_1	274.407013729011	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTTTGTGGGAAACCAT	34	False	NA	27	True	AAAACA	-34	NA	39342469	39385718	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_39342577_39348287_39348390_39354005_39354067_39356688_39357090_39369654_39370126_39375649_39375890_39376436_39376547_39376704_39376792_39377484_39377825_39378503_39378590_39379965_39380085_39380586_39380786_39380989_39381114_39383207_39383292_39383498
H1_mix_00043782	chr19	+	3701	30	FSM	ENSG00000196235.14	ENST00000432763.7	3678	30	-24	1	0	-1	multi-exon	TRUE	canonical	3	378	junction_1	91.2081806832227	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGCGTGTGTGTGTGTGTG	-3	True	NA	20	True	AATAAA	-21	NA	39445557	39476669	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_39445638_39445803_39445966_39453355_39453522_39457674_39457741_39458293_39458306_39458817_39458888_39459004_39459074_39459183_39459250_39459558_39459590_39459891_39459961_39464797_39465050_39466479_39466570_39466674_39466746_39468755_39468862_39469078_39469173_39469261_39469399_39470118_39470275_39470376_39470524_39471356_39471504_39471604_39471731_39472408_39472494_39472809_39472930_39473011_39473115_39473202_39473331_39473415_39473522_39473962_39474122_39474233_39474403_39474514_39474719_39476080_39476177_39476255
H1_mix_00043784	chr19	+	3770	28	FSM	ENSG00000196235.14	ENST00000359191.10	3770	28	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	129.132953253274	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGTGTGTGTGTGTGTGT	-6	True	NA	21	True	AATAAA	-22	NA	39445643	39476670	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_39445966_39453355_39453522_39457674_39457741_39458817_39458888_39459004_39459074_39459183_39459250_39459558_39459590_39459891_39459961_39464797_39465050_39466479_39466570_39466674_39466746_39468755_39468862_39469078_39469173_39469261_39469399_39470118_39470275_39470376_39470524_39471356_39471504_39471604_39471731_39472408_39472494_39472809_39472930_39473011_39473115_39473202_39473331_39473415_39473522_39473962_39474122_39474233_39474403_39474514_39474719_39476080_39476177_39476255
H1_mix_00043785	chr19	+	3742	29	FSM	ENSG00000196235.14	ENST00000598725.5	3742	29	0	0	0	0	multi-exon	FALSE	canonical	3	489	junction_4	82.6586909143465	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGTGTGTGTGTGTGTGT	-3	True	NA	21	True	AATAAA	-22	NA	39445683	39476670	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_39445966_39453355_39453522_39457674_39457741_39458293_39458306_39458817_39458888_39459004_39459074_39459183_39459250_39459558_39459590_39459891_39459961_39464797_39465050_39466479_39466570_39466674_39466746_39468755_39468862_39469078_39469173_39469261_39469399_39470118_39470275_39470376_39470524_39471356_39471504_39471604_39471731_39472408_39472494_39472809_39472930_39473011_39473115_39473202_39473331_39473415_39473522_39473962_39474122_39474233_39474403_39474514_39474719_39476080_39476177_39476255
H1_mix_00043787	chr19	+	718	2	FSM	ENSG00000196235.14	ENST00000600818.1	718	2	0	0	0	0	multi-exon	FALSE	canonical	3	933	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGTGTGTGTGTGTGTGT	2385	False	NA	21	True	AATAAA	-22	NA	39475873	39476670	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_39476177_39476255
H1_mix_00043789	chr19	+	5053	11	FSM	ENSG00000105197.11	ENST00000607714.6	5037	11	-16	0	-16	0	multi-exon	FALSE	canonical	3	1081	junction_3	56.8971879797236	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	7333	False	NA	16	True	AATAAA	-16	NA	39480821	39493779	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_39480962_39481882_39482034_39482884_39482917_39483134_39483157_39485543_39485603_39485687_39485808_39486186_39486292_39486396_39486496_39488060_39488218_39488538_39488646_39489718
H1_mix_00043797	chr19	+	1543	10	FSM	ENSG00000013275.8	ENST00000593455.5	1532	10	-11	0	-6	0	multi-exon	FALSE	canonical	3	777	junction_6	116.743255284068	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTTCTTCAATAAATAGAT	-22	True	NA	21	True	NA	NA	NA	39971158	39981408	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_39971239_39972145_39972245_39972368_39972556_39974293_39974441_39974523_39974634_39974734_39974829_39979816_39979985_39980069_39980455_39980661_39980718_39981191
H1_mix_00043799	chr19	+	1644	10	FSM	ENSG00000013275.8	ENST00000601697.5	1623	10	-21	0	-6	0	multi-exon	TRUE	canonical	3	777	junction_6	109.439763013244	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATTTCTTCTTAGAAGT	-22	True	NA	54	True	AATAAA	-19	NA	39971158	39981441	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_39971239_39972145_39972245_39972368_39972556_39974293_39974441_39974523_39974634_39974734_39974829_39979816_39979985_39980069_39980147_39980285_39980718_39981191
H1_mix_00043800	chr19	+	1760	11	FSM	ENSG00000013275.8	ENST00000157812.7	1754	11	-6	0	-6	0	multi-exon	FALSE	canonical	3	777	junction_6	111.310556552377	2498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAATGATGGATATGTTC	-22	True	NA	NA	False	NA	NA	NA	39971158	39981764	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_39971239_39972145_39972245_39972368_39972556_39974293_39974441_39974523_39974634_39974734_39974829_39979816_39979985_39980069_39980147_39980285_39980455_39980661_39980718_39981191
H1_mix_00043806	chr19	+	2238	13	FSM	ENSG00000105223.20	ENST00000409735.9	2137	13	-111	10	0	0	multi-exon	TRUE	canonical	3	172	junction_1	491.042845777116	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTACAGCCTGTGCCT	NA	False	NA	6	True	AGTAAA	-6	NA	40348583	40378475	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_40348769_40365717_40365931_40366418_40366511_40366609_40366685_40366772_40366916_40367695_40367880_40369907_40370029_40370109_40370238_40371672_40371874_40374480_40374621_40376608_40376775_40377785_40377886_40377985
H1_mix_00043808	chr19	+	2328	13	NIC	ENSG00000105223.20	novel	2180	13	NA	NA	2	0	intron_retention	FALSE	canonical	3	83	junction_2	625.773804314839	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGTGCCTGACTGAGT	16	True	NA	14	True	AGTAAA	-14	NA	40348701	40378483	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_40348769_40365552_40365931_40366383_40366511_40366609_40366685_40366772_40366916_40367695_40367880_40369907_40370029_40370109_40370238_40371672_40371874_40374480_40374621_40376608_40376775_40377785_40377886_40377985
H1_mix_00043809	chr19	+	2156	14	NIC	ENSG00000105223.20	novel	2180	13	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_2	606.904191965134	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGTGCCTGACTGAGT	21	True	NA	14	True	AGTAAA	-14	NA	40348706	40378483	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_40348769_40365552_40365586_40365717_40365931_40366418_40366511_40366609_40366685_40366772_40366916_40367695_40367880_40369907_40370029_40370109_40370238_40371672_40371874_40374480_40374621_40376608_40376775_40377785_40377886_40377985
H1_mix_00043810	chr19	+	2315	13	NIC	ENSG00000105223.20	novel	2137	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	465	junction_1	412.793128172777	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTACAGCCTGTGCCT	-14	True	NA	6	True	AGTAAA	-6	NA	40348671	40378475	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_40348769_40365552_40365931_40366418_40366511_40366609_40366685_40366772_40366916_40367695_40367880_40369907_40370029_40370109_40370238_40371672_40371874_40374480_40374621_40376608_40376775_40377785_40377886_40377985
H1_mix_00043818	chr19	+	833	9	FSM	ENSG00000160410.15	ENST00000599575.5	810	9	-23	0	-9	0	multi-exon	TRUE	canonical	3	9	junction_4	205.634992158436	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGCTTTGGGTGAACATG	NA	False	NA	NA	False	NA	NA	NA	40576843	40580838	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_40576986_40577230_40577285_40577395_40577442_40577556_40577631_40578122_40578213_40578461_40578543_40580323_40580486_40580565_40580657_40580745
H1_mix_00043819	chr19	+	2363	18	FSM	ENSG00000160410.15	ENST00000291842.10	2341	18	-22	0	-2	0	multi-exon	FALSE	canonical	3	525	junction_11	41.2480050896456	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTGCTTATTCTTAGCA	-22	True	NA	20	True	AATAAA	-15	NA	40576850	40591397	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_40576986_40577230_40577285_40577395_40577442_40577556_40577631_40578153_40578213_40578461_40578543_40580323_40580486_40580565_40580657_40580745_40580937_40582350_40582467_40583397_40583486_40583600_40583718_40586773_40586945_40588623_40588780_40589081_40589179_40590243_40590423_40590729_40590854_40590975
H1_mix_00043821	chr19	+	684	4	FSM	ENSG00000160410.15	ENST00000595726.1	684	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	281.113658310814	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTGCTTATTCTTAGCA	11	True	NA	20	True	AATAAA	-15	NA	40588738	40591397	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_40588780_40589081_40589179_40590729_40590854_40590975
H1_mix_00043825	chr19	+	4968	30	FSM	ENSG00000090006.18	ENST00000396819.8	4961	30	-7	0	-7	0	multi-exon	FALSE	canonical	3	11	junction_1	90.9700529574282	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGCCTCCTCCTGTCT	-5	True	NA	23	True	ATTAAA	-17	NA	40601361	40629818	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_40601638_40605034_40605227_40605404_40605653_40605728_40605832_40606232_40606308_40606403_40606527_40607364_40607530_40608219_40608370_40608483_40608604_40609529_40609662_40609745_40609872_40610531_40610658_40611151_40611395_40611858_40611985_40612072_40612193_40613064_40613197_40613403_40613530_40613915_40614039_40614314_40614447_40616888_40617021_40617099_40617226_40619346_40619494_40622400_40622668_40622949_40623022_40623603_40623733_40623935_40624083_40625856_40626010_40626974_40627356_40627704_40627858_40629395
H1_mix_00043826	chr19	+	3802	23	NIC	ENSG00000090006.18	novel	4961	30	NA	NA	10	-1	combination_of_known_splicesites	FALSE	canonical	3	25	junction_5	99.6884817239672	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTTTGCCTCCTCCTGT	906	False	NA	21	True	ATTAAA	-15	NA	40606475	40629816	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_40606527_40607364_40607530_40608219_40608370_40608483_40608604_40609529_40609662_40610531_40610658_40611151_40611395_40611858_40611985_40612072_40612193_40613064_40613197_40613403_40613530_40613915_40614039_40614314_40614447_40616888_40617021_40617099_40617226_40619346_40619494_40622400_40622668_40623603_40623733_40623935_40624083_40625856_40626010_40626974_40627356_40627704_40627858_40629395
H1_mix_00043831	chr19	+	2446	11	FSM	ENSG00000090006.18	ENST00000595118.5	2446	11	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_2	70.9625957811578	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTTGCCTCCTCCTGTC	167	False	NA	22	True	ATTAAA	-16	NA	40613595	40629817	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_40614039_40614314_40614447_40619346_40619494_40622400_40622668_40622949_40623022_40623603_40623733_40623935_40624083_40625856_40626010_40626974_40627356_40627704_40627858_40629395
H1_mix_00043832	chr19	+	2327	11	NIC	ENSG00000090006.18	novel	3140	19	NA	NA	37	-1	combination_of_known_junctions	FALSE	canonical	3	60	junction_5	102.528483847173	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTTTGCCTCCTCCTGT	204	False	NA	21	True	ATTAAA	-15	NA	40613632	40629816	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_40614039_40614314_40614447_40616888_40617021_40617099_40617226_40619346_40619494_40623603_40623733_40623935_40624083_40625856_40626010_40626974_40627356_40627704_40627858_40629395
H1_mix_00043834	chr19	+	1786	9	NIC	ENSG00000090006.18	novel	3140	19	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	60	junction_3	95.1162939511417	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTTTGCCTCCTCCTGT	2	True	NA	21	True	ATTAAA	-15	NA	40613915	40629816	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_40614039_40614314_40614447_40619346_40619494_40623603_40623733_40623935_40624083_40625856_40626010_40626974_40627356_40627704_40627858_40629395
H1_mix_00043835	chr19	+	1742	9	NIC	ENSG00000090006.18	novel	3140	19	NA	NA	29	-1	combination_of_known_splicesites	FALSE	canonical	3	14	junction_5	123.964712721	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTTTGCCTCCTCCTGT	-4	True	NA	21	True	ATTAAA	-15	NA	40613944	40629816	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_40614039_40614314_40614447_40616888_40617021_40619346_40619494_40623603_40623733_40625856_40626010_40626974_40627356_40627704_40627858_40629395
H1_mix_00043836	chr19	+	1700	8	FSM	ENSG00000090006.18	ENST00000318809.11	1700	8	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	101.680772970295	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACCTGGAGAAGGGACCT	162	False	NA	NA	False	NA	NA	NA	40614110	40629649	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_40614447_40619346_40619494_40623603_40623733_40623935_40624083_40625856_40626010_40626974_40627356_40627704_40627858_40629395
H1_mix_00043837	chr19	+	2287	11	NIC	ENSG00000090006.18	novel	3140	19	NA	NA	-14	-1	combination_of_known_junctions	FALSE	canonical	3	61	junction_2	89.9691058086052	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTTTGCCTCCTCCTGT	-12	True	NA	21	True	ATTAAA	-15	NA	40614161	40629816	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_40614447_40616888_40617021_40619346_40619494_40622400_40622668_40622949_40623022_40623603_40623733_40623935_40624083_40625856_40626010_40626974_40627356_40627704_40627858_40629395
H1_mix_00043841	chr19	+	1277	6	FSM	ENSG00000077312.9	ENST00000243563.8	1277	6	0	0	0	0	multi-exon	FALSE	canonical	3	1576	junction_5	50.9768574943572	241	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTCTGTCTGATTTT	3	True	NA	37	True	ATTAAA	-30	NA	40751202	40765389	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_40751482_40757331_40757505_40759430_40759611_40762900_40763075_40763586_40763676_40765007
H1_mix_00043847	chr19	+	2131	6	FSM	ENSG00000269858.6	ENST00000303961.9	2100	6	-33	2	-33	0	multi-exon	FALSE	canonical	3	876	junction_1	75.5989417915357	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATCTGACTCCATCTGCA	2424	False	NA	18	True	AATAAA	-20	NA	40799157	40808432	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_40799263_40800338_40801416_40806554_40806675_40807137_40807275_40807483_40807552_40807808
H1_mix_00043850	chr19	+	2821	5	FSM	ENSG00000269858.6	ENST00000593726.5	2821	5	0	0	0	0	multi-exon	FALSE	canonical	3	1010	junction_2	30.5153649822512	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTGACTCCATCTGCAA	22	False	NA	19	True	AATAAA	-21	NA	40799544	40808433	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_40801416_40806554_40806675_40807137_40807275_40807483_40807552_40807808
H1_mix_00043852	chr19	+	6388	3	FSM	ENSG00000269858.6	ENST00000599579.5	3894	3	-2494	0	289	0	multi-exon	FALSE	canonical	3	1055	junction_1	20.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATCTGACTCCATCTGCA	1736	False	NA	18	True	AATAAA	-20	NA	40801578	40808432	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_40807275_40807483_40807552_40807808
H1_mix_00043853	chr19	+	5926	4	FSM	ENSG00000269858.6	ENST00000593445.5	3034	4	-2891	-1	289	0	multi-exon	FALSE	canonical	3	1010	junction_1	35.1220095603249	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTGACTCCATCTGCAA	1736	False	NA	19	True	AATAAA	-21	NA	40801578	40808433	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_40806675_40807137_40807275_40807483_40807552_40807808
H1_mix_00043854	chr19	+	2906	8	ISM	ENSG00000197408.10	ENST00000324071.10	3071	9	12689	0	25	0	3prime_fragment	FALSE	canonical	3	18	junction_2	8.24126005820341	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGATCTGTGCCATTTT	NA	False	NA	18	True	AATAAA	-31	NA	41003970	41018398	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_41004164_41004296_41004447_41006904_41007066_41009218_41009396_41009993_41010136_41012297_41012486_41012673_41012816_41016645
H1_mix_00043856	chr19	+	4956	19	FSM	ENSG00000167601.12	ENST00000359092.7	3206	19	-278	-1472	-266	0	multi-exon	TRUE	canonical	3	68	junction_9	13.1656117720877	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTGTCTCCTCTTGTCT	-5	True	NA	17	True	CATAAA	-18	NA	41218956	41261766	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_41219478_41220635_41220859_41221145_41221247_41221879_41222057_41230966_41231048_41231182_41231299_41237943_41238155_41238469_41238610_41239163_41239315_41242882_41243016_41243615_41243708_41248513_41248610_41248742_41248821_41252350_41252444_41252845_41252968_41253598_41253709_41256451_41256612_41257492_41257630_41259552
H1_mix_00043857	chr19	+	4749	20	FSM	ENSG00000167601.12	ENST00000301178.9	4717	20	-32	0	-32	0	multi-exon	FALSE	canonical	3	38	junction_9	22.662891435107	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTGTCTCCTCTTGTCT	-17	True	NA	17	True	CATAAA	-18	NA	41219190	41261766	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_41219478_41220635_41220859_41221145_41221247_41221879_41222057_41230966_41231048_41231182_41231299_41237943_41238155_41238469_41238610_41239163_41239315_41239693_41239721_41242882_41243016_41243615_41243708_41248513_41248610_41248742_41248821_41252350_41252444_41252845_41252968_41253598_41253709_41256451_41256612_41257492_41257630_41259552
H1_mix_00043859	chr19	+	3424	15	FSM	ENSG00000105323.18	ENST00000352456.7	3426	15	2	0	2	0	multi-exon	FALSE	canonical	3	282	junction_13	302.034462150481	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAATGTGTTTGCCCTG	239	False	NA	19	True	NA	NA	NA	41262497	41307598	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_41262583_41268222_41268346_41272081_41272236_41273981_41274056_41276158_41276299_41279076_41279177_41281162_41281276_41292244_41292512_41294337_41294461_41294557_41294687_41301535_41301705_41302664_41302950_41303971_41304262_41305645_41305868_41306448
H1_mix_00043861	chr19	+	3925	15	FSM	ENSG00000105323.18	ENST00000392006.8	3925	15	0	0	0	0	multi-exon	FALSE	canonical	3	571	junction_1	188.489010668678	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTGCCTGGCCCCGAT	-3	True	NA	13	True	ATTAAA	-17	NA	41264371	41307787	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_41264799_41268222_41268346_41272081_41272236_41273981_41274056_41276158_41276299_41279076_41279177_41281162_41281276_41292244_41292512_41294337_41294461_41294557_41294687_41301535_41301705_41302664_41302950_41303971_41304262_41305675_41305868_41306448
H1_mix_00043862	chr19	+	3043	15	FSM	ENSG00000105323.18	ENST00000595196.5	3043	15	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	288.634399070053	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTTAAAAAGCAAAATGGGG	-3	True	NA	51	True	ATTAAA	-29	NA	41264410	41307050	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_41264693_41268222_41268346_41272081_41272236_41273981_41274056_41276158_41276299_41279076_41279177_41281162_41281276_41292244_41292512_41294337_41294461_41294557_41294687_41301535_41301705_41302664_41302950_41303971_41304262_41305675_41305868_41306448
H1_mix_00043863	chr19	+	4609	15	NIC	ENSG00000105323.18	novel	3925	15	NA	NA	-654	0	intron_retention	FALSE	canonical	3	282	junction_13	274.896538979408	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTGCCTGGCCCCGAT	326	False	NA	13	True	ATTAAA	-17	NA	41263717	41307787	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_41264799_41268222_41268346_41272081_41272236_41273981_41274056_41276158_41276299_41279076_41279177_41281162_41281276_41292244_41292512_41294337_41294461_41294557_41294687_41301535_41301705_41302664_41302950_41303971_41304262_41305645_41305868_41306448
H1_mix_00043869	chr19	+	1046	4	FSM	ENSG00000142046.15	ENST00000436170.6	864	4	-205	23	-160	0	multi-exon	FALSE	canonical	3	22	junction_3	25.694789787469	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAGACACCCTTGCAGCC	NA	False	NA	-6	True	ATTAAA	-1	NA	41376372	41384060	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_41376855_41378280_41378520_41382771_41382922_41383885
H1_mix_00043870	chr19	+	732	4	FSM	ENSG00000142046.15	ENST00000544232.5	725	4	-7	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	24.7521042876493	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGAGTCTGTTCGCGTGTG	-6	True	NA	17	True	ATTAAA	-24	NA	41376732	41384083	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_41376855_41378280_41378520_41382771_41382922_41383862
H1_mix_00043871	chr19	+	721	4	FSM	ENSG00000142046.15	ENST00000447302.6	721	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	32.7651576458218	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGAGTCTGTTCGCGTGTG	-6	True	NA	17	True	ATTAAA	-24	NA	41376732	41384083	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_41376855_41378280_41378520_41382771_41382922_41383873
H1_mix_00043872	chr19	+	1610	3	FSM	ENSG00000142046.15	ENST00000542945.5	1610	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAGACACCCTTGCAGCC	34	True	NA	-6	True	ATTAAA	-1	NA	41376772	41384060	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_41376855_41378280_41378520_41382771
H1_mix_00043874	chr19	+	772	1	FSM	ENSG00000268034.1	ENST00000600996.1	747	1	-21	-4	-21	4	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTCTCACCCTGCTGCT	-7	True	NA	NA	False	NA	NA	NA	41506130	41506902	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_41506100_41506900
H1_mix_00043875	chr19	+	1128	6	FSM	ENSG00000105372.8	ENST00000593863.5	526	6	-603	1	-412	-1	multi-exon	FALSE	canonical	3	67	junction_1	13256.6799101434	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGGTCTGGGTCTCTTT	NA	False	NA	30	True	AATAAA	-15	NA	41859842	41871415	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_41860495_41860774_41860846_41861111_41861213_41869030_41869215_41869698_41869754_41871350
H1_mix_00043876	chr19	+	2021	6	FSM	ENSG00000105372.8	ENST00000598742.6	2021	6	0	0	0	0	multi-exon	FALSE	canonical	3	22127	junction_5	5790.38905774042	3166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTTGTTTACACTCAGCAA	-1	True	NA	13	True	AATAAA	-14	NA	41860254	41872925	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_41860290_41860774_41860846_41861111_41861213_41869030_41869215_41869698_41869754_41871350
H1_mix_00043877	chr19	+	2617	6	FSM	ENSG00000105372.8	ENST00000600467.6	668	6	-443	-1506	-443	-3	multi-exon	FALSE	canonical	3	307	junction_1	13167.7527558806	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCGTTGTTTACACTCAG	NA	False	NA	10	True	AATAAA	-11	NA	41859811	41872922	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_41860446_41860774_41860846_41861111_41861213_41869030_41869215_41869698_41869754_41871350
H1_mix_00043879	chr19	+	3091	28	FSM	ENSG00000076928.18	ENST00000347545.8	3091	28	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	50.9714140279723	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGATGGCGGG	16	True	NA	34	True	AATATA	-18	NA	41883224	41907454	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_41883290_41888063_41888107_41888191_41888279_41888751_41888866_41892330_41892374_41892602_41892850_41893273_41893304_41894206_41894307_41894450_41894548_41894625_41894662_41895348_41895487_41896376_41896483_41898441_41898588_41901886_41902034_41902273_41902357_41902532_41902659_41902783_41902899_41903306_41903408_41903706_41903785_41904034_41904111_41904215_41904384_41904948_41905037_41905174_41905262_41905759_41905828_41905938_41906026_41906456_41906621_41906702_41906804_41907104
H1_mix_00043880	chr19	+	3443	28	NIC	ENSG00000076928.18	novel	3171	29	NA	NA	-295	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_4	52.1332575541743	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGTGTGTGTGATGGCG	866	False	NA	32	True	AATATA	-16	NA	41884074	41907452	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_41884494_41888063_41888107_41888191_41888279_41888751_41888866_41892330_41892374_41892602_41892850_41893273_41893304_41894206_41894307_41894450_41894548_41894625_41894662_41895348_41895487_41896376_41896483_41898441_41898588_41901886_41902034_41902273_41902357_41902532_41902659_41902783_41902899_41903306_41903408_41903706_41903785_41904034_41904111_41904215_41904384_41904948_41905037_41905174_41905262_41905759_41905828_41905938_41906026_41906456_41906621_41906702_41906804_41907104
H1_mix_00043881	chr19	+	3171	29	FSM	ENSG00000076928.18	ENST00000337665.8	3171	29	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	33.3016516106934	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGATGGCGGG	31	True	NA	34	True	AATATA	-18	NA	41884447	41907454	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_41884494_41888063_41888107_41888191_41888279_41888751_41888866_41892024_41892124_41892330_41892374_41892602_41892850_41893273_41893304_41894206_41894307_41894450_41894548_41894625_41894662_41895348_41895487_41896376_41896483_41898441_41898588_41901886_41902034_41902273_41902357_41902532_41902659_41902783_41902899_41903306_41903408_41903706_41903785_41904034_41904111_41904215_41904384_41904948_41905037_41905174_41905262_41905759_41905828_41905938_41906026_41906456_41906621_41906702_41906804_41907104
H1_mix_00043882	chr19	+	737	4	FSM	ENSG00000076928.18	ENST00000617585.1	737	4	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_1	19.09624744987	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCGCTCCTCTCTCACCT	6421	False	NA	NA	False	NA	NA	NA	41894486	41896878	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_41894548_41894625_41894662_41895348_41895487_41896376
H1_mix_00043883	chr19	+	576	2	FSM	ENSG00000076928.18	ENST00000593609.1	576	2	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGTGTGTGTGATGGCG	9575	False	NA	32	True	AATATA	-16	NA	41906575	41907452	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_41906804_41907104
H1_mix_00043885	chr19	+	4624	3	FSM	ENSG00000167625.11	ENST00000301215.8	3982	3	-1	-641	-1	641	multi-exon	FALSE	canonical	3	37	junction_1	9.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGATTCCTGATAGGCTC	-9	True	NA	NA	False	NA	NA	NA	42220310	42228842	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_42220388_42224214_42224306_42224386
H1_mix_00043886	chr19	+	4806	3	FSM	ENSG00000167625.11	ENST00000597945.1	573	3	0	-4233	0	641	multi-exon	FALSE	canonical	3	6	junction_1	25	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGATTCCTGATAGGCTC	57	False	NA	NA	False	NA	NA	NA	42220376	42228842	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_42220636_42224214_42224306_42224386
H1_mix_00043892	chr19	+	1544	3	FSM	ENSG00000188368.11	ENST00000341747.8	1523	3	-21	0	13	0	multi-exon	TRUE	canonical	3	43	junction_2	6	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGATTTTCAGTGAGTT	NA	False	NA	6	True	AATAAA	-16	NA	42302110	42310814	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_42302504_42309578_42310186_42310270
H1_mix_00043893	chr19	+	528	5	FSM	ENSG00000167619.13	ENST00000595775.5	558	5	-14	44	2	-44	multi-exon	FALSE	canonical	3	11	junction_1	0.707106781186548	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGGGCTGGGGTGGCCA	-9	True	NA	NA	False	NA	NA	NA	42313310	42314893	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_42313497_42314271_42314347_42314450_42314529_42314612_42314700_42314791
H1_mix_00043894	chr19	+	2425	14	NIC	ENSG00000167619.13	novel	2219	15	NA	NA	2	0	intron_retention	TRUE	canonical	3	8	junction_5	3.05182068075037	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTTCTTTTGCATCTT	-9	True	NA	21	True	AATAAA	-24	NA	42313310	42325064	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_42313497_42314271_42314347_42314450_42314529_42314612_42314700_42314791_42314894_42314992_42315078_42315187_42315260_42315371_42315441_42316480_42316562_42316661_42316964_42317708_42317882_42320316_42320438_42323582_42323790_42324277
H1_mix_00043895	chr19	+	2231	15	FSM	ENSG00000167619.13	ENST00000673187.1	2219	15	-12	0	-12	0	multi-exon	FALSE	canonical	3	8	junction_5	3.00424869211616	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCTATAACATGGCTTC	0	True	NA	10	True	AATAAA	-13	NA	42313364	42325053	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_42313497_42314271_42314347_42314450_42314529_42314612_42314700_42314791_42314894_42314992_42315078_42315187_42315260_42315371_42315441_42316480_42316562_42316661_42316741_42316869_42316964_42317708_42317882_42320316_42320438_42323582_42323790_42324277
H1_mix_00043896	chr19	+	11032	41	FSM	ENSG00000105429.13	ENST00000378073.5	11034	41	0	2	0	2	multi-exon	TRUE	canonical	1	3	junction_40	8.52551318103491	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGTCTGAGCGCGTCTG	30	False	NA	29	True	AATAAA	-17	NA	42325608	42378767	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_42326431_42333604_42333769_42334006_42334214_42335034_42335216_42335296_42335386_42335930_42336347_42336806_42336953_42337083_42337207_42343476_42343632_42343953_42344074_42344440_42344586_42344669_42344834_42348271_42348473_42349498_42349700_42350147_42350385_42351215_42351335_42351428_42351561_42351647_42351762_42352207_42352457_42352927_42353128_42353464_42353676_42353774_42354025_42354587_42354721_42355757_42356006_42356082_42356194_42356334_42356454_42356773_42356982_42357403_42357585_42358143_42358308_42358786_42358955_42359097_42359243_42360774_42361007_42362089_42362214_42362383_42362598_42363047_42363263_42368454_42368663_42368842_42369003_42369530_42369724_42370188_42370360_42370700_42370832_42375506
H1_mix_00043898	chr19	+	278	2	FSM	ENSG00000213904.10	ENST00000593491.3	306	2	28	0	-17	0	multi-exon	FALSE	canonical	3	21	junction_1	0	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCATAGCTCTCGGCTGGT	15	False	NA	17	True	AGTAAA	-27	NA	42397141	42408452	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_42397225_42408257
H1_mix_00043899	chr19	+	1454	3	FSM	ENSG00000213904.10	ENST00000594624.6	1448	3	-6	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.5	2917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGCCGTCCACATTTC	3	True	NA	9	True	AATAAA	-18	NA	42397167	42652355	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_42397225_42485095_42485224_42651086
H1_mix_00043900	chr19	+	474	1	Genic_Genomic	ENSG00000243167.1	novel	NA	NA	NA	NA	371	33	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TACAGCCAAAAAGAAAAAAA	NA	False	NA	NA	False	AATAAA	-3	NA	42670375	42670849	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr19_+_42670400_42670800
H1_mix_00043902	chr19	+	591	4	FSM	ENSG00000234465.11	ENST00000562255.5	569	4	-22	0	-22	0	multi-exon	FALSE	canonical	3	9	junction_1	33.5592345297419	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGTCCTTGTGGTGTG	3725	False	NA	NA	False	TATAAA	-17	NA	43580521	43582098	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_43580588_43581211_43581365_43581562_43581704_43581867
H1_mix_00043904	chr19	+	706	3	FSM	ENSG00000234465.11	ENST00000562365.2	706	3	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTGTGGTGTGATGTAT	488	False	NA	NA	False	TATAAA	-23	NA	43581036	43582104	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_43581365_43581562_43581704_43581867
H1_mix_00043910	chr19	+	2726	5	FSM	ENSG00000204920.11	ENST00000611002.4	2732	5	6	0	6	0	multi-exon	FALSE	canonical	2	2	junction_1	19.765816451642	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTTGTGTCTGTGCTTCT	NA	False	NA	41	True	ATTAAA	-17	NA	43984175	43998325	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_43984349_43988458_43988559_43991547_43991675_43991841_43991935_43996092
H1_mix_00043915	chr19	+	4435	5	FSM	ENSG00000178386.13	ENST00000434772.8	2399	5	-30	-2006	-30	2006	multi-exon	FALSE	canonical	3	28	junction_3	6.75925291729789	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTCTATTCAGATATTTT	-24	True	NA	-58	True	NA	NA	NA	44052005	44070005	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44052196_44055108_44055192_44060454_44060582_44060748_44060842_44066063
H1_mix_00043916	chr19	+	4748	6	FSM	ENSG00000178386.13	ENST00000593088.5	895	6	-19	-3834	2	2054	multi-exon	FALSE	canonical	1	1	junction_4	17.7696370249929	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCTATTTGGTTTGAGC	13	True	NA	-10	True	ATTAAA	-3	NA	44052042	44070053	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44052196_44055108_44055192_44060454_44060582_44060748_44060842_44063264_44063567_44066063
H1_mix_00043924	chr19	+	4498	1	FSM	ENSG00000267680.6	ENST00000591551.1	2994	1	17	-1521	17	21	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTGTAAATGAATATTTT	NA	False	NA	36	True	AATAAA	-39	NA	44105349	44109847	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44105300_44109800
H1_mix_00043927	chr19	+	4548	6	FSM	ENSG00000263002.8	ENST00000592437.5	2292	6	-3	-2253	0	59	multi-exon	FALSE	canonical	3	27	junction_1	10.2058806577385	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGATATTTTCATTCCTG	-6	True	NA	68	True	AATGAA	-43	NA	44141553	44160372	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44141616_44142313_44142368_44144556_44144648_44148770_44148898_44150412_44150506_44156251
H1_mix_00043929	chr19	+	834	6	FSM	ENSG00000167380.17	ENST00000300823.10	817	6	-17	0	3	0	multi-exon	FALSE	canonical	3	33	junction_5	47.1822000334872	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGTGTGAAATCTTAAAT	-8	True	NA	NA	False	ATTAAA	-16	NA	44165086	44175429	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44165143_44165756_44165808_44170034_44170096_44172087_44172215_44172859_44172953_44174983
H1_mix_00043932	chr19	+	5984	5	FSM	ENSG00000167380.17	ENST00000588883.5	5972	5	-12	0	5	0	multi-exon	FALSE	canonical	3	21	junction_1	51.4556848171317	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAGTTGCTAATGACACA	-6	True	NA	NA	False	NA	NA	NA	44165088	44178381	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44165143_44165587_44165808_44170034_44170096_44172087_44172215_44172859
H1_mix_00043934	chr19	+	3503	4	ISM	ENSG00000167380.17	ENST00000454662.6	2605	6	3835	4	-1034	0	3prime_fragment	FALSE	canonical	3	69	junction_3	37.973675092095	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTCGTGTCATTTGAAT	3864	False	NA	12	True	TATAAA	-14	NA	44168998	44177683	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_44170096_44172087_44172215_44172859_44172953_44175497
H1_mix_00043936	chr19	+	3043	6	FSM	ENSG00000131115.16	ENST00000313040.12	3049	6	6	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	13.2875881934985	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAGGACTCATGATTCTT	-15	True	NA	16	True	AATAAA	-21	NA	44212537	44237268	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44212586_44213089_44213245_44217790_44217853_44228445_44228573_44229732_44229817_44234701
H1_mix_00043942	chr19	+	5792	8	FSM	ENSG00000073008.15	ENST00000425690.8	5792	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_6	13.114877048604	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATCGAAGTGATTGTTTG	26	True	NA	NA	False	AATAAA	-29	NA	44643909	44666162	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44644176_44647222_44647571_44649808_44650106_44653899_44654018_44657761_44657911_44658741_44658901_44661291_44661324_44661739
H1_mix_00043943	chr19	+	4323	2	ISM	ENSG00000073008.15	ENST00000406449.8	1344	6	11783	-1939	5839	-847	3prime_fragment	FALSE	canonical	3	67	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCCATCTGGTTCCAGAG	8865	False	NA	NA	False	NA	NA	NA	44655879	44661033	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_44657911_44658741
H1_mix_00043946	chr19	+	3853	10	FSM	ENSG00000142273.13	ENST00000341505.4	1441	10	1	-2413	1	2395	multi-exon	FALSE	canonical	2	17	junction_4	28.975085082801	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTTTGGAAAAATTAGC	-23	True	NA	NA	False	NA	NA	NA	44777869	44803047	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44778285_44780904_44781052_44781206_44781364_44782369_44782492_44790003_44790092_44792382_44792515_44793473_44793621_44794203_44794282_44800380_44800451_44800550
H1_mix_00043948	chr19	+	3355	1	FSM	ENSG00000285128.1	ENST00000644659.1	310	1	-3048	3	-3048	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGCCGCAAATGACAGCAA	5041	False	NA	2	True	AATAAA	-13	NA	44800652	44804007	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44800700_44804000
H1_mix_00043954	chr19	+	1721	10	FSM	ENSG00000130204.13	ENST00000405636.6	1709	10	-14	2	-14	0	multi-exon	FALSE	canonical	3	1321	junction_1	355.671022917541	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGGGAGGCCTCCGTTTT	NA	False	NA	20	True	AATATA	-15	NA	44891205	44903686	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44891315_44891406_44891690_44892392_44892461_44892836_44892930_44893779_44893882_44893960_44894067_44900729_44900853_44901027_44901105_44901207_44901311_44903029
H1_mix_00043956	chr19	+	3434	9	FSM	ENSG00000130204.13	ENST00000592434.5	3415	9	-19	0	-8	0	multi-exon	FALSE	canonical	3	1321	junction_1	371.486877291783	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGGGAGGCCTCCGTTTT	NA	False	NA	20	True	AATATA	-15	NA	44891211	44903686	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44891315_44891406_44891690_44892392_44892461_44892836_44892930_44893779_44893882_44893960_44894067_44900729_44900853_44901027_44901105_44901207
H1_mix_00043957	chr19	+	1791	9	FSM	ENSG00000130204.13	ENST00000426677.7	1768	9	-23	0	0	0	multi-exon	FALSE	canonical	3	2328	junction_5	76.8602628150594	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGAGGCCTCCGTTTTCTC	5	True	NA	23	True	AATATA	-18	NA	44891230	44903689	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44891690_44892392_44892461_44892836_44892930_44893779_44893882_44893960_44894067_44900729_44900853_44901027_44901105_44901207_44901311_44903029
H1_mix_00043958	chr19	+	1715	11	NNC	ENSG00000130204.13	novel	1709	10	NA	NA	21	-2	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_10	939.351909563184	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGATGGGAGGCCTCCGTT	10	True	NA	18	True	AATATA	-13	NA	44891274	44903684	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_44891315_44891406_44891690_44892392_44892461_44892836_44892930_44893779_44893882_44893960_44894067_44900729_44900853_44901027_44901105_44901207_44901311_44901387_44901453_44903029
H1_mix_00043960	chr19	+	1304	4	FSM	ENSG00000280087.1_ENSG00000130203.10	ENST00000446996.5	737	4	-118	-449	-118	0	multi-exon	FALSE	canonical	3	87	junction_1	5583.6938988053	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTGGCCTCCCCCTGTG	5845	False	NA	33	True	AATAAA	-21	NA	44905672	44909393	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44905842_44906586_44906668_44907759_44907953_44908532
H1_mix_00043962	chr19	+	6024	4	FSM	ENSG00000130203.10	ENST00000252486.9	1166	4	-5	-4853	0	4853	multi-exon	FALSE	canonical	3	11010	junction_1	452.619290598868	365	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATCGATCACGACCCTCT	-4	True	NA	NA	False	NA	NA	NA	44905790	44914246	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44905842_44906601_44906668_44907759_44907953_44908532
H1_mix_00043965	chr19	+	582	4	FSM	ENSG00000130208.10	ENST00000592535.6	514	4	-71	3	-71	0	multi-exon	FALSE	canonical	3	1740	junction_1	218.088666983561	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTCTCCTGAGTGCTT	212	False	NA	37	True	AATAAA	-12	NA	44914536	44919343	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44914734_44914871_44914950_44916189_44916326_44919172
H1_mix_00043966	chr19	+	280	3	FSM	ENSG00000130208.10	ENST00000589781.1	273	3	-7	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	806.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTCTCCTGAGTGCTT	-5	True	NA	37	True	AATAAA	-12	NA	44914702	44919343	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44914734_44914871_44914950_44919172
H1_mix_00043967	chr19	+	514	4	FSM	ENSG00000130208.10	ENST00000592176.1	514	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	1019.43590066053	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTGAGTGCTTCTTTAC	16	True	NA	43	True	AATAAA	-18	NA	44914868	44919349	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44914950_44915097_44915218_44916189_44916326_44919172
H1_mix_00043968	chr19	+	506	3	FSM	ENSG00000214855.10	ENST00000575148.6	567	3	59	2	54	0	multi-exon	FALSE	canonical	3	6	junction_2	45.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGGCCAGGCATGGTGG	55	False	NA	14	True	AATAAA	-18	NA	44926857	44931193	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44927034_44927794_44927931_44930999
H1_mix_00043970	chr19	+	2482	14	FSM	ENSG00000104853.16	ENST00000337392.10	2470	14	-12	0	-12	0	multi-exon	FALSE	canonical	3	845	junction_6	51.2558266279416	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGCCCCTCCTCCTCGT	-15	True	NA	34	True	AATAAA	-28	NA	44955367	44993341	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44955468_44961962_44962076_44973086_44973211_44974438_44974598_44977342_44977461_44985217_44985304_44986454_44986576_44987178_44987424_44988079_44988174_44990394_44990586_44990849_44990946_44991237_44991374_44992232_44992401_44992610
H1_mix_00043974	chr19	+	2277	12	FSM	ENSG00000104856.14	ENST00000221452.13	2258	12	-19	0	-4	0	multi-exon	TRUE	canonical	0	0	junction_2	25.1070435607946	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGGGTTTCGTCTGTTCT	-33	True	NA	6	True	AATAAA	-17	NA	45001444	45038192	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_45001686_45002948_45002997_45009813_45009823_45011935_45012277_45022052_45022211_45025328_45025421_45025605_45025738_45028887_45028993_45032533_45032750_45034243_45034313_45034450_45034529_45037404
H1_mix_00043976	chr19	+	2222	21	FSM	ENSG00000104859.15	ENST00000391952.7	2213	21	-9	0	6	0	multi-exon	TRUE	canonical	3	49	junction_15	31.7021686955325	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCTCAGTGTCATCTGT	-5	True	NA	47	True	AATAAA	-26	NA	45039055	45070956	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_45039109_45040183_45040312_45052070_45052169_45052790_45052893_45053097_45053178_45056449_45056535_45057749_45057899_45059267_45059365_45060388_45060468_45060553_45060628_45062153_45062196_45064011_45064228_45064342_45064631_45067336_45067595_45068014_45068059_45068419_45068481_45069065_45069125_45069201_45069249_45070021_45070105_45070536_45070562_45070802
H1_mix_00043981	chr19	+	848	2	FSM	ENSG00000142252.11	ENST00000591607.1	848	2	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCCCAGTGCTCCCCTC	3500	False	NA	-32	True	ATTAAA	-30	NA	45079194	45090869	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_45079280_45090106
H1_mix_00043982	chr19	+	883	2	FSM	ENSG00000142252.11	ENST00000391951.2	716	2	-11	-156	0	0	multi-exon	FALSE	canonical	3	378	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCCCAGTGCTCCCCTC	-9	True	NA	-32	True	ATTAAA	-30	NA	45079257	45090869	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_45079378_45090106
H1_mix_00043983	chr19	+	1655	3	FSM	ENSG00000142252.11	ENST00000270257.9	1653	3	-2	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	62	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGCGAAAGTGCGGCGGCC	-9	True	NA	NA	False	AGTAAA	-22	NA	45079257	45091518	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_45079378_45079906_45080030_45090106
H1_mix_00043987	chr19	+	3030	1	FSM	ENSG00000189114.8	ENST00000587722.1	732	1	-452	-1846	-13	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTATGGTTAGTTCCTTT	-6	True	NA	8	True	ATTAAA	-16	NA	45178770	45181800	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_45178800_45181800
H1_mix_00043991	chr19	+	3476	2	FSM	ENSG00000117877.11	ENST00000592852.1	1061	2	-297	-2118	-279	0	multi-exon	FALSE	canonical	3	212	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTTCTGTGCCTGGCTT	170	False	NA	18	True	AATAAA	-18	NA	45406364	45410737	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_45407236_45408132
H1_mix_00043992	chr19	+	2822	3	FSM	ENSG00000117877.11	ENST00000309424.8	2822	3	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	38	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTTCTGTGCCTGGCTT	-4	True	NA	18	True	AATAAA	-18	NA	45406643	45410737	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_45406719_45407093_45407236_45408132
H1_mix_00043996	chr19	+	1751	5	FSM	ENSG00000213889.11	ENST00000451287.7	1751	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	43.8940485715319	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGACATGTTTTGCCTAGT	-13	True	NA	57	True	AATACA	-19	NA	45498442	45502513	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_45499412_45499948_45500067_45500455_45500562_45500649_45500711_45502016
H1_mix_00043997	chr19	+	895	5	FSM	ENSG00000213889.11	ENST00000396735.6	895	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	28.8227340826647	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAAGACATGTTTTGCCT	928	False	NA	54	True	ATTAAA	-45	NA	45499609	45502510	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_45499726_45499948_45500067_45500455_45500562_45500649_45500711_45502016
H1_mix_00043998	chr19	+	1953	4	FSM	ENSG00000213889.11	ENST00000415077.1	1953	4	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_2	4.32049379893857	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAACCAAATGTTTTTGAA	151	False	NA	NA	False	AAAAAG	-44	NA	45498606	45502342	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_45500067_45500455_45500562_45500649_45500711_45502016
H1_mix_00044001	chr19	+	2239	13	NNC	ENSG00000125753.14	novel	2242	13	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	165	junction_6	198.462055567305	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTAAGATCTCTGGAGTGA	12	True	NA	13	True	AATAAA	-19	NA	45507478	45526983	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_45507777_45517662_45517835_45517928_45518095_45521321_45521407_45522167_45522218_45522339_45522582_45522720_45522819_45523643_45523696_45523840_45523878_45524096_45524143_45524569_45524661_45525945_45526004_45526139
H1_mix_00044003	chr19	+	2224	13	NNC	ENSG00000125753.14	novel	2242	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_8	277.749324931673	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTAAGATCTCTGGAGTGA	24	True	NA	13	True	AATAAA	-19	NA	45507490	45526983	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_45507777_45517662_45517835_45517928_45518095_45521321_45521407_45522167_45522218_45522339_45522582_45522720_45522819_45523643_45523696_45523843_45523878_45524096_45524143_45524569_45524661_45525945_45526004_45526139
H1_mix_00044010	chr19	+	1923	2	FSM	ENSG00000170608.3	ENST00000302177.3	1923	2	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_1	0	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAATGTCTCTTTTCCTTG	-1	True	NA	33	True	ATTAAA	-21	NA	45864325	45873797	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_45864526_45872074
H1_mix_00044011	chr19	+	1841	14	FSM	ENSG00000104983.8	ENST00000595358.5	1817	14	-24	0	-18	0	multi-exon	FALSE	canonical	3	52	junction_1	12.3776855910835	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCTCAGCTTATGACTAAA	NA	False	NA	15	True	AATAAA	-18	NA	45995442	46018616	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_45995505_46003007_46003167_46003418_46003502_46006558_46006717_46008139_46008302_46015048_46015260_46015344_46015428_46016053_46016224_46016317_46016394_46016693_46016834_46016990_46017070_46017246_46017305_46018077_46018151_46018289
H1_mix_00044012	chr19	+	872	5	FSM	ENSG00000104983.8	ENST00000599044.1	849	5	-23	0	-23	0	multi-exon	FALSE	canonical	3	68	junction_4	11.4564392373896	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCCGGCAGCTCGAGGAG	2953	False	NA	NA	False	NA	NA	NA	46002982	46015333	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_46003167_46003418_46003502_46006558_46006717_46008139_46008302_46015048
H1_mix_00044013	chr19	+	569	5	FSM	ENSG00000124440.16	ENST00000533789.5	562	5	-7	0	-3	0	multi-exon	TRUE	canonical	3	81	junction_2	48.0572575164251	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCACCCAGGCAGCCTGG	-13	True	NA	NA	False	NA	NA	NA	46297038	46309266	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_46297103_46303897_46304089_46308220_46308306_46308662_46308776_46309150
H1_mix_00044019	chr19	+	2240	15	NIC	ENSG00000124440.16	novel	5856	15	NA	NA	14	-1	combination_of_known_junctions	FALSE	canonical	3	74	junction_14	37.2323783822629	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTATGTGTGAGTATCCT	8	True	NA	NA	False	AATAAA	-12	NA	46297059	46338537	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_46297103_46303897_46304089_46305244_46305391_46308220_46308306_46308662_46308776_46309150_46309360_46312160_46312268_46312505_46312654_46320442_46320562_46321775_46321967_46325534_46325640_46329206_46329479_46331155_46331274_46334904_46334987_46338226
H1_mix_00044020	chr19	+	477	2	FSM	ENSG00000124440.16	ENST00000524533.1	507	2	0	30	0	-30	multi-exon	FALSE	canonical	3	13	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCCCTCCTCCGGGAAGC	63	False	NA	NA	False	NA	NA	NA	46298297	46304157	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_46298515_46303897
H1_mix_00044024	chr19	+	2052	13	FSM	ENSG00000124440.16	ENST00000600383.1	2101	13	49	0	49	0	multi-exon	FALSE	canonical	3	74	junction_12	46.2933730558585	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATGTGTGAGTATCCTG	259	False	NA	NA	False	AATAAA	-13	NA	46303897	46338538	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_46304089_46308220_46308306_46308662_46308776_46309150_46309360_46312160_46312268_46312505_46312654_46320442_46320562_46321775_46321967_46325534_46325640_46329206_46329479_46331155_46331274_46334904_46334987_46338226
H1_mix_00044027	chr19	+	1820	14	FSM	ENSG00000011485.15	ENST00000478046.5	1886	14	-14	80	0	-80	multi-exon	TRUE	canonical	1	2	junction_12	326.926588216438	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATCCCAGACTGTCTTTT	2	True	NA	NA	False	CATAAA	-28	NA	46347086	46392901	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_46347218_46353747_46353990_46375603_46375752_46376452_46376575_46383410_46383477_46383779_46383879_46384803_46384910_46387092_46387236_46387365_46387454_46388407_46388449_46388552_46388732_46390050_46390133_46391150_46391259_46392636
H1_mix_00044028	chr19	+	399	2	FSM	ENSG00000011485.15	ENST00000467902.2	399	2	0	0	0	0	multi-exon	FALSE	canonical	3	951	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCGGACACTGTGCCGAGG	NA	False	NA	NA	False	NA	NA	NA	46375603	46376703	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_46375752_46376452
H1_mix_00044029	chr19	+	2209	8	FSM	ENSG00000011485.15	ENST00000486994.5	2209	8	0	0	0	0	multi-exon	FALSE	canonical	3	831	junction_2	31.6627638124801	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTCCTATAGCCCCATGG	NA	False	NA	-84	True	NA	NA	NA	46382771	46390746	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_46383879_46384803_46384910_46387092_46387236_46387365_46387454_46388407_46388449_46388552_46388732_46390050_46390133_46390283
H1_mix_00044030	chr19	+	848	5	FSM	ENSG00000011485.15	ENST00000492109.6	848	5	0	0	0	0	multi-exon	FALSE	canonical	3	831	junction_1	36.0589794642056	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTGACGTCACCAAGGCC	NA	False	NA	NA	False	NA	NA	NA	46384376	46388595	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_46384910_46387092_46387236_46387365_46387454_46388407_46388449_46388552
H1_mix_00044039	chr19	+	6732	4	FSM	ENSG00000181027.11	ENST00000391909.7	2801	4	-52	-3879	-41	-214	multi-exon	FALSE	canonical	2	4	junction_3	20.0720922897661	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTACTATGTTCTTATTT	5	False	NA	NA	False	AATGAA	-12	NA	46746004	46761792	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_46746091_46748026_46748089_46748514_46748718_46755411
H1_mix_00044044	chr19	+	2012	12	NIC	ENSG00000130751.10	novel	2100	12	NA	NA	-1	-13	combination_of_known_junctions	FALSE	canonical	3	26	junction_9	23.0977083761876	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTCTCCCTGCAGTGGTT	18	True	NA	-3	True	ATTAAA	-4	NA	47019847	47045745	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_47019998_47021005_47021170_47021611_47021848_47032277_47032352_47032642_47032733_47035963_47036130_47039035_47039152_47039406_47039565_47040443_47040551_47041024_47041126_47042809_47042905_47045190
H1_mix_00044046	chr19	+	936	5	NIC	ENSG00000130751.10	novel	1341	8	NA	NA	2	6	combination_of_known_splicesites	FALSE	canonical	3	13	junction_2	34.7589916424513	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTAAACGCCGGCTCTC	16	False	NA	-15	True	NA	NA	NA	47035333	47045733	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_47035359_47035963_47036130_47040443_47040551_47042809_47042905_47045190
H1_mix_00044049	chr19	+	483	3	FSM	ENSG00000142230.13	ENST00000600753.1	483	3	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	1691.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAAGTGTTGGGAGAGGA	1	True	NA	NA	False	NA	NA	NA	47130860	47153038	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_47131029_47150201_47150376_47152897
H1_mix_00044050	chr19	+	2107	9	FSM	ENSG00000142230.13	ENST00000596995.1	2106	9	0	-1	0	0	multi-exon	FALSE	canonical	3	87	junction_1	1078.71740246229	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTGTTTTTCTTCCAC	29	True	NA	23	True	AATAAA	-17	NA	47130888	47210191	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_47131113_47143493_47143606_47150201_47150376_47152897_47153041_47155113_47155214_47169817_47169924_47197232_47197378_47203670_47203741_47209158
H1_mix_00044052	chr19	+	2049	12	FSM	ENSG00000105321.14	ENST00000221922.11	2027	12	-22	0	-20	0	multi-exon	TRUE	canonical	3	101	junction_1	28.1407325143871	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATTCCCCCAGGTGTGT	833	False	NA	18	True	AATAAA	-18	NA	47256502	47271953	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_47256610_47258329_47258404_47258558_47258664_47260320_47260423_47260587_47260840_47264602_47264687_47264772_47264947_47266610_47266793_47270406_47270454_47270552_47270689_47271081_47271188_47271273
H1_mix_00044053	chr19	+	2453	14	NIC	ENSG00000105321.14	novel	834	5	NA	NA	-120	134	combination_of_known_junctions	FALSE	canonical	3	47	junction_1	52.9932450758456	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGAACTGTGTTTCTGG	868	False	NA	18	True	ATTAAA	-18	NA	47257411	47273835	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_47257655_47258329_47258404_47258558_47258664_47260320_47260423_47260587_47260840_47264602_47264687_47264772_47264947_47266610_47266793_47270406_47270454_47270552_47270689_47271081_47271188_47271273_47271650_47272068_47272162_47273356
H1_mix_00044055	chr19	+	2057	12	NIC	ENSG00000105321.14	novel	834	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_1	42.4006861007954	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATTCCCCCAGGTGTGT	11	False	NA	18	True	AATAAA	-18	NA	47257539	47271953	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_47257655_47258329_47258404_47258558_47258664_47260320_47260423_47260587_47260840_47264602_47264687_47264772_47264947_47266610_47266793_47270406_47270454_47270552_47270689_47271081_47271188_47271273
H1_mix_00044058	chr19	+	1006	1	FSM	ENSG00000257704.4	ENST00000552360.4	839	1	-169	2	-169	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGATGCCTCCCCTCCCA	284	False	NA	52	True	AATAAA	-44	NA	47274715	47275721	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_47274700_47275700
H1_mix_00044060	chr19	+	4135	18	Fusion	ENSG00000288827.1_ENSG00000134815.19	novel	1838	11	NA	NA	410	-12	multi-exon	TRUE	canonical	3	8	junction_1	59.7099679853926	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATGCTGATACACACTGT	339	False	NA	13	True	AATAAA	-5	NA	47349764	47382267	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_+_47349962_47352753_47353736_47355038_47355351_47357865_47358121_47359967_47360071_47362475_47362694_47366980_47367156_47372729_47372924_47373598_47373701_47375465_47375709_47375923_47376098_47376442_47376561_47376914_47376990_47377099_47377207_47379709_47379986_47380815_47380993_47381185_47381325_47381979
H1_mix_00044061	chr19	+	5506	17	NIC	ENSG00000134815.19	novel	4338	17	NA	NA	1883	0	combination_of_known_junctions	FALSE	canonical	3	94	junction_12	41.5735417663687	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGTTAGGCCTGCACC	1772	False	NA	25	True	AATAAA	-17	NA	47351197	47382279	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_47353736_47355038_47355351_47357865_47358121_47359967_47360071_47362475_47362694_47366980_47367156_47372729_47372924_47373598_47373701_47375465_47375709_47375923_47376098_47376442_47376561_47376914_47376990_47377099_47377207_47379709_47379986_47380815_47380993_47381185_47381325_47381979
H1_mix_00044062	chr19	+	5847	16	ISM	ENSG00000134815.19	ENST00000328771.9	4338	17	1883	9	1883	-9	3prime_fragment	FALSE	canonical	3	108	junction_11	33.7805992973613	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCGGGCATGGTTGCTC	1772	False	NA	9	True	AATAAA	-18	NA	47351197	47382695	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_47353736_47355038_47355351_47357865_47358121_47359967_47360071_47362475_47362694_47366980_47367156_47372729_47372924_47373598_47373701_47375465_47375709_47375923_47376098_47376442_47376561_47377099_47377207_47379709_47379986_47380815_47380993_47381185_47381325_47381979
H1_mix_00044071	chr19	+	649	6	FSM	ENSG00000105373.19	ENST00000599582.1	626	6	-23	0	-23	0	multi-exon	FALSE	canonical	3	15	junction_1	478.103754429935	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGAGGTGGCGCCTGCCGG	23	False	NA	NA	False	NA	NA	NA	47745867	47752553	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_47746030_47746966_47747032_47750177_47750287_47750907_47751108_47751519_47751591_47752511
H1_mix_00044074	chr19	+	725	5	FSM	ENSG00000178980.16	ENST00000601419.5	717	5	-8	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	1315.61135978677	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTCAATAAATATTGGATG	6	False	NA	12	True	NA	NA	NA	47778682	47784654	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_47778815_47780863_47780918_47781107_47781183_47781289_47781389_47784289
H1_mix_00044082	chr19	+	761	4	FSM	ENSG00000142227.11	ENST00000596315.5	761	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	97.1264925525243	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCTTGATCTTCCTT	18	False	NA	30	True	AATAAA	-14	NA	48325346	48330553	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_48325611_48327520_48327624_48329351_48329493_48330300
H1_mix_00044086	chr19	+	4596	12	NNC	ENSG00000105443.16	novel	4443	12	NA	NA	11	0	intron_retention	TRUE	non_canonical	0	0	junction_8	85.5149689665813	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGAATGTGATCTGATT	1	True	NA	28	True	ATTAAA	-17	NA	48469218	48482314	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_48469527_48470352_48470501_48470602_48470670_48472324_48472444_48473297_48473379_48473904_48474018_48474181_48474331_48474837_48474951_48478066_48478146_48478274_48478347_48478437_48478593_48479122
H1_mix_00044087	chr19	+	3826	13	NIC	ENSG00000105443.16	novel	4443	12	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_12	65.7220578564677	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGAATGTGATCTGATT	-6	True	NA	28	True	ATTAAA	-17	NA	48469324	48482314	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_48469527_48470352_48470501_48470602_48470670_48472324_48472444_48473297_48473379_48473904_48474018_48474181_48474331_48474837_48474950_48478068_48478146_48478274_48478347_48478437_48478593_48479122_48480089_48480749
H1_mix_00044088	chr19	+	4652	11	FSM	ENSG00000105443.16	ENST00000493260.5	4652	11	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_10	15.9878078547373	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGCCTGCTGACCCCCT	16	False	NA	36	True	NA	NA	NA	48469346	48479382	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_48469527_48470352_48470501_48470602_48470670_48472324_48472444_48473297_48473379_48473904_48474018_48474181_48474331_48474837_48478146_48478274_48478347_48478437_48478593_48479122
H1_mix_00044089	chr19	+	4465	12	FSM	ENSG00000105443.16	ENST00000452733.7	4443	12	-22	0	0	0	multi-exon	FALSE	canonical	3	234	junction_8	22.7407232925377	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGAATGTGATCTGATT	16	False	NA	28	True	ATTAAA	-17	NA	48469346	48482314	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_48469527_48470352_48470501_48470602_48470670_48472324_48472444_48473297_48473379_48473904_48474018_48474181_48474331_48474837_48474950_48478068_48478146_48478274_48478347_48478437_48478593_48479122
H1_mix_00044095	chr19	+	2866	7	FSM	ENSG00000063176.16	ENST00000598088.5	2866	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	70.6456336623542	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTCTGCCCTTCCTCCA	-2	True	NA	34	True	AATAAA	-23	NA	48619533	48630405	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_48619690_48620401_48620554_48625890_48626363_48627691_48627842_48627974_48628070_48628161_48628278_48628680
H1_mix_00044096	chr19	+	2599	6	NIC	ENSG00000063176.16	novel	1542	6	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	71.8849080127394	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTCTGCCCTTCCTCCA	6	True	NA	34	True	AATAAA	-23	NA	48624389	48630405	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_48624431_48625890_48626363_48627691_48627842_48627974_48628070_48628161_48628278_48628680
H1_mix_00044098	chr19	+	2683	6	FSM	ENSG00000063176.16	ENST00000599748.5	2683	6	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	37.2580192710241	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTCTGCCCTTCCTCCA	68	False	NA	34	True	AATAAA	-23	NA	48624951	48630405	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_48625077_48625890_48626363_48627691_48627842_48627974_48628070_48628161_48628278_48628680
H1_mix_00044100	chr19	+	341	2	FSM	ENSG00000176920.13	ENST00000522283.1	312	2	-29	0	-29	0	multi-exon	FALSE	canonical	3	7	junction_1	0	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGATGGCCCTACGTTAT	14	True	NA	NA	False	AATAAA	-13	NA	48696003	48696643	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_48696080_48696378
H1_mix_00044102	chr19	+	2353	3	FSM	ENSG00000087074.8	ENST00000200453.6	2350	3	-4	1	-4	-1	multi-exon	FALSE	canonical	3	300	junction_2	11.5	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGAGCAGCGTCTGTATGT	-3	True	NA	15	True	AATAAA	-15	NA	48872416	48876057	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_48872652_48873224_48874899_48875613
H1_mix_00044104	chr19	+	2406	13	FSM	ENSG00000104805.16	ENST00000405315.9	2406	13	0	0	0	0	multi-exon	FALSE	canonical	3	523	junction_1	80.8783379870998	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGAGAGGCTCAATCCT	-20	True	NA	117	True	NA	NA	NA	48900311	48923372	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_48900373_48900785_48900932_48904346_48904455_48905752_48905886_48911148_48911253_48913010_48913197_48913473_48913565_48918725_48918785_48919029_48919123_48919193_48919287_48921153_48921325_48921826_48921933_48922317
H1_mix_00044106	chr19	+	1485	4	FSM	ENSG00000104805.16	ENST00000492367.1	1515	4	30	0	30	0	multi-exon	FALSE	canonical	3	757	junction_1	29.7993288515027	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCATGGCTCCATGCCT	6010	False	NA	13	True	AATACA	-12	NA	48919029	48923268	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_48919287_48921153_48921325_48921826_48921933_48922317
H1_mix_00044117	chr19	+	1574	15	FSM	ENSG00000183207.14	ENST00000596247.5	1563	15	-11	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	450.23368648845	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGTGTATGTGTGGTTG	1	True	NA	20	True	TATAAA	-21	NA	48993886	49015929	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_48993924_48999318_48999374_49003278_49003335_49004206_49004419_49007017_49007148_49007301_49007369_49009775_49009883_49009972_49010067_49010487_49010612_49010998_49011094_49011191_49011311_49014483_49014604_49015020_49015151_49015571_49015687_49015816
H1_mix_00044119	chr19	+	1853	13	FSM	ENSG00000183207.14	ENST00000594338.1	1853	13	0	0	0	0	multi-exon	FALSE	canonical	3	1308	junction_5	225.686160531734	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACTCTGTATAAAATGGT	5433	False	NA	-15	True	NA	NA	NA	48999318	49015894	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_48999374_49003278_49003335_49004276_49004419_49007017_49007148_49007301_49007369_49009775_49009883_49009972_49010612_49010998_49011094_49011191_49011311_49014483_49014604_49015020_49015151_49015571_49015687_49015816
H1_mix_00044123	chr19	+	1603	10	FSM	ENSG00000104852.15	ENST00000221448.9	1603	10	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_9	362.847687665836	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCCCCTTGGATTTAAAA	2	True	NA	-7	True	NA	NA	NA	49085450	49108563	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49085637_49086404_49086562_49090290_49090354_49090465_49090521_49098426_49098492_49098641_49098705_49101389_49101472_49104633_49104736_49107624_49107713_49107821
H1_mix_00044124	chr19	+	1671	10	FSM	ENSG00000104852.15	ENST00000598441.6	1671	10	0	0	0	0	multi-exon	FALSE	canonical	3	1129	junction_9	164.772570532841	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGGGCACCTCGGTTTCT	2	True	NA	20	True	AATAAA	-17	NA	49085450	49108604	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49085637_49086404_49086562_49090290_49090354_49090465_49090521_49098426_49098492_49098641_49098705_49101389_49101472_49104633_49104736_49107624_49107713_49107794
H1_mix_00044125	chr19	+	1673	11	FSM	ENSG00000104852.15	ENST00000595231.5	1673	11	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_8	658.485269387251	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGGCACCTCGGTTTCTT	46	False	NA	21	True	AATAAA	-18	NA	49085494	49108605	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49085637_49086404_49086562_49090290_49090354_49090465_49090521_49098426_49098492_49098641_49098705_49101389_49101472_49102113_49102186_49104633_49104736_49107624_49107713_49107821
H1_mix_00044126	chr19	+	3221	3	FSM	ENSG00000104852.15	ENST00000544278.2	3221	3	0	0	0	0	multi-exon	FALSE	canonical	3	1129	junction_2	202	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGTGGGCACCTCGGTTT	3970	False	NA	18	True	AATAAA	-15	NA	49102410	49108602	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49104736_49107624_49107713_49107794
H1_mix_00044132	chr19	+	1615	6	FSM	ENSG00000177380.14	ENST00000602897.1	1615	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	21.8668699177546	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGCTTCCTTGTTGACT	NA	False	NA	5	True	NA	NA	NA	49148100	49151021	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49148259_49148665_49148764_49148992_49149169_49149256_49149326_49149546_49149719_49150079
H1_mix_00044134	chr19	+	980	2	FSM	ENSG00000177380.14	ENST00000602783.1	980	2	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGCTTCCTTGTTGACT	391	False	NA	5	True	NA	NA	NA	49149957	49151021	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49150152_49150235
H1_mix_00044144	chr19	+	2174	14	FSM	ENSG00000161618.10	ENST00000540132.5	2174	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	66.4840595745686	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGACTTTCCCCTTCTGGTT	-39	True	NA	-26	True	NA	NA	NA	49453224	49470534	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49453422_49460821_49460900_49461618_49461801_49461883_49462037_49462569_49462756_49463853_49463950_49464126_49464264_49464416_49464523_49464631_49464763_49465737_49465906_49466081_49466284_49468380_49468567_49468863_49468987_49470305
H1_mix_00044147	chr19	+	1098	7	FSM	ENSG00000142541.18	ENST00000621674.4	1098	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	6493.49342076787	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAATCTGGCGTCTTTG	3243	False	NA	9	True	AATAAA	-9	NA	49487553	49492301	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49487645_49489849_49489913_49490474_49490577_49490778_49490865_49491039_49491100_49491424_49491548_49491728
H1_mix_00044148	chr19	+	862	7	FSM	ENSG00000142541.18	ENST00000479992.5	850	7	-12	0	0	0	multi-exon	FALSE	canonical	3	11170	junction_1	2451.17540965327	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTTGCCCTGGAATGTA	-3	True	NA	46	True	AATAAA	-37	NA	49487602	49491861	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49487645_49489849_49489923_49490231_49490577_49490778_49490865_49491039_49491100_49491424_49491548_49491728
H1_mix_00044149	chr19	+	1132	8	FSM	ENSG00000142541.18	ENST00000391857.9	1127	8	-5	0	0	0	multi-exon	FALSE	canonical	3	11170	junction_1	2275.28244490253	11482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCGTCTTTGCACTGTG	-3	True	NA	16	True	AATAAA	-16	NA	49487602	49492308	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49487645_49489849_49489923_49490231_49490298_49490474_49490577_49490778_49490865_49491039_49491100_49491424_49491548_49491728
H1_mix_00044150	chr19	+	1235	8	FSM	ENSG00000142541.18	ENST00000624069.3	1122	8	0	-113	0	0	multi-exon	FALSE	canonical	3	308	junction_2	6016.39461838082	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATAAATTGAATGATCCTT	-3	True	NA	129	True	AATATA	-19	NA	49487602	49492421	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49487645_49489849_49489913_49490231_49490298_49490474_49490577_49490778_49490865_49491039_49491100_49491424_49491548_49491728
H1_mix_00044151	chr19	+	2054	5	FSM	ENSG00000142541.18	ENST00000676477.1	2049	5	-5	0	0	0	multi-exon	FALSE	canonical	3	11170	junction_1	2990.60315822745	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATAAATTGAATGATCCTT	-3	True	NA	129	True	AATATA	-19	NA	49487602	49492421	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49487645_49489849_49490298_49490474_49490577_49490778_49491548_49491728
H1_mix_00044152	chr19	+	2351	5	FSM	ENSG00000142541.18	ENST00000677048.1	2345	5	-6	0	0	0	multi-exon	FALSE	canonical	3	11170	junction_1	2617.02334485193	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCCTAAACACTAAAAGTAAA	-3	True	NA	-31	True	NA	NA	NA	49487602	49492839	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49487645_49489849_49490865_49491039_49491100_49491424_49491548_49491728
H1_mix_00044153	chr19	+	2185	7	FSM	ENSG00000142541.18	ENST00000676556.1	2177	7	-13	5	0	-5	multi-exon	FALSE	canonical	3	11170	junction_1	2456.3839728801	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCCAGAAGAGTCTGAAGA	-3	True	NA	NA	False	GGGGCT	-9	NA	49487602	49493052	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49487645_49489849_49490298_49490474_49490577_49490778_49490865_49491039_49491100_49491424_49491548_49491728
H1_mix_00044154	chr19	+	1691	8	FSM	ENSG00000142541.18	ENST00000678510.1	1861	8	-5	175	0	43	multi-exon	FALSE	canonical	3	23	junction_3	7564.41295724626	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTCATGCTGTCCTTGCG	-3	True	NA	12	True	AGTAAA	-24	NA	49487602	49492882	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49487645_49489849_49489913_49490231_49490298_49490479_49490577_49490778_49490865_49491039_49491100_49491424_49491548_49491728
H1_mix_00044155	chr19	+	2593	3	FSM	ENSG00000142541.18	ENST00000678187.1	2768	3	0	175	0	43	multi-exon	FALSE	canonical	3	15872	junction_1	1127.5	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTCATGCTGTCCTTGCG	2160	False	NA	12	True	AGTAAA	-24	NA	49489783	49492882	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49491100_49491424_49491548_49491728
H1_mix_00044158	chr19	+	1157	3	FSM	ENSG00000142534.7	ENST00000599167.5	1133	3	-5	-19	0	0	multi-exon	FALSE	canonical	3	4871	junction_1	921	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCGCCTTTACCAGAGCATT	2213	False	NA	63	True	AATAAA	-38	NA	49496364	49499708	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49496472_49497193_49498047_49499511
H1_mix_00044159	chr19	+	576	5	FSM	ENSG00000142534.7	ENST00000270625.7	573	5	-3	0	0	0	multi-exon	FALSE	canonical	3	4871	junction_1	791.396352973654	4675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCGCCTTTACCAGAGCATT	-6	True	NA	63	True	AATAAA	-38	NA	49496430	49499708	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49496472_49497193_49497326_49497519_49497596_49497916_49498047_49499511
H1_mix_00044160	chr19	+	770	4	FSM	ENSG00000142534.7	ENST00000602252.5	751	4	0	-19	0	0	multi-exon	FALSE	canonical	3	4871	junction_1	911.842944566418	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCGCCTTTACCAGAGCATT	-6	True	NA	63	True	AATAAA	-38	NA	49496430	49499708	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49496472_49497193_49497596_49497916_49498047_49499511
H1_mix_00044162	chr19	+	2699	3	FSM	ENSG00000104870.13	ENST00000595881.1	2681	3	-18	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	49.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGTGTGTTCTCATCAT	475	False	NA	19	True	AATATA	-18	NA	49513176	49526331	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49514487_49524506_49525574_49526009
H1_mix_00044174	chr19	+	890	6	FSM	ENSG00000126453.10	ENST00000598979.5	893	6	0	3	0	-2	multi-exon	FALSE	canonical	3	246	junction_2	350.397146107099	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTCAATTGTCTGTTCTT	-33	True	NA	13	True	AATAAA	-36	NA	49665960	49673913	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49666068_49666684_49666800_49668850_49668938_49669023_49669116_49670215_49670489_49673697
H1_mix_00044175	chr19	+	617	5	FSM	ENSG00000126453.10	ENST00000594157.5	620	5	0	3	0	-2	multi-exon	FALSE	canonical	3	67	junction_4	508.219686749736	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTCAATTGTCTGTTCTT	-33	True	NA	13	True	AATAAA	-36	NA	49665960	49673913	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49666068_49666684_49666800_49668850_49668938_49669023_49669116_49673697
H1_mix_00044178	chr19	+	787	7	FSM	ENSG00000126457.22	ENST00000534280.5	766	7	-21	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2378.04046900431	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGCCCCAGCGGGACGG	84	False	NA	NA	False	NA	NA	NA	49677151	49684069	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49677317_49679871_49679930_49680139_49680239_49680486_49680589_49681909_49682066_49682195_49682260_49683926
H1_mix_00044181	chr19	+	1350	11	FSM	ENSG00000126457.22	ENST00000454376.7	1328	11	-22	0	0	0	multi-exon	FALSE	canonical	3	406	junction_2	1729.67530189917	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGGCTTTGTTTCCTGGG	12	False	NA	28	True	AATAAA	-13	NA	49677248	49688447	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49677317_49679871_49679926_49680486_49680589_49681909_49682066_49682195_49682260_49683926_49684070_49684753_49684842_49684921_49685038_49686092_49686244_49686604_49686727_49688161
H1_mix_00044183	chr19	+	2800	19	FSM	ENSG00000169169.15	ENST00000323446.9	2783	19	-17	0	-17	0	multi-exon	FALSE	canonical	3	126	junction_1	57.3137617326818	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTCTGCTATGCT	1497	False	NA	11	True	AATAAA	-16	NA	49691092	49713731	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49691341_49692238_49692394_49697325_49697466_49700683_49700856_49701316_49701419_49701496_49701635_49704709_49704788_49705006_49705115_49705213_49705299_49705908_49706105_49706230_49706414_49707517_49707624_49708722_49708840_49710319_49710485_49710722_49710858_49711808_49711962_49712735_49712850_49712971_49713065_49713419
H1_mix_00044184	chr19	+	2764	19	NIC	ENSG00000169169.15	novel	2785	20	NA	NA	-14	0	intron_retention	FALSE	canonical	3	27	junction_7	82.3124129966637	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTCTGCTATGCT	1500	False	NA	11	True	AATAAA	-16	NA	49691095	49713731	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_49691341_49692238_49692394_49697325_49697466_49700683_49700856_49701316_49701419_49701496_49701635_49704709_49704788_49705039_49705115_49705213_49705299_49705908_49706105_49706230_49706414_49707517_49707624_49708722_49708840_49710319_49710485_49710722_49710858_49711808_49711962_49712735_49712850_49712971_49713065_49713419
H1_mix_00044185	chr19	+	2866	20	FSM	ENSG00000169169.15	ENST00000598293.6	2846	20	-20	0	-14	0	multi-exon	FALSE	canonical	3	153	junction_1	57.4336181919175	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTCTGCTATGCT	1500	False	NA	11	True	AATAAA	-16	NA	49691095	49713731	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49691341_49691820_49691890_49692238_49692394_49697325_49697466_49700683_49700856_49701316_49701419_49701496_49701635_49704709_49704788_49705006_49705115_49705213_49705299_49705908_49706105_49706230_49706414_49707517_49707624_49708722_49708840_49710319_49710485_49710722_49710858_49711808_49711962_49712735_49712850_49712971_49713065_49713419
H1_mix_00044187	chr19	+	2793	20	FSM	ENSG00000169169.15	ENST00000405931.6	2785	20	-8	0	0	0	multi-exon	FALSE	canonical	3	27	junction_8	80.7642854614228	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTCTGCTATGCT	11	True	NA	11	True	AATAAA	-16	NA	49691135	49713731	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49691341_49691820_49691890_49692238_49692394_49697325_49697466_49700683_49700856_49701316_49701419_49701496_49701635_49704709_49704788_49705039_49705115_49705213_49705299_49705908_49706105_49706230_49706414_49707517_49707624_49708722_49708840_49710319_49710485_49710722_49710858_49711808_49711962_49712735_49712850_49712971_49713065_49713419
H1_mix_00044195	chr19	+	3286	24	FSM	ENSG00000196961.13	ENST00000359032.9	3286	24	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_19	157.853513008099	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCCCCATGTCTGTGTC	121	False	NA	12	True	AATAAA	-13	NA	49767133	49807110	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49767201_49781756_49781826_49781946_49782090_49782530_49782725_49791934_49792065_49792990_49793093_49795629_49795739_49798801_49798953_49799326_49799496_49799628_49799767_49799967_49800151_49800960_49801059_49801389_49801622_49801721_49801890_49801980_49802142_49802533_49802600_49802948_49803006_49803106_49803190_49803286_49803377_49805452_49805577_49805660_49805778_49805871_49805942_49806118_49806254_49806680
H1_mix_00044197	chr19	+	4010	18	FSM	ENSG00000104973.19	ENST00000593767.3	4003	18	-7	0	0	0	multi-exon	FALSE	canonical	3	47	junction_17	73.6047143818842	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGGCCGTCGACTTTT	-15	True	NA	7	True	AGTAAA	-17	NA	49818281	49840383	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49818476_49818570_49818617_49819171_49819297_49828448_49828548_49828969_49829091_49829785_49829949_49830087_49830219_49830510_49830599_49830693_49830888_49831332_49831462_49831935_49832022_49832099_49832158_49832307_49832416_49834985_49835178_49835533_49835606_49835726_49835946_49836225_49836407_49838579
H1_mix_00044199	chr19	+	1994	12	FSM	ENSG00000104960.15	ENST00000391842.5	1875	12	-139	20	0	0	multi-exon	FALSE	canonical	3	1100	junction_1	101.941402711444	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCCCAATAAAGCCTTTT	20	True	NA	0	True	NA	NA	NA	49851019	49860713	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49851500_49854405_49854544_49854651_49854735_49854830_49854889_49854969_49855078_49856974_49857131_49857692_49857783_49857903_49857978_49858056_49858115_49858548_49858654_49859985_49860184_49860267
H1_mix_00044200	chr19	+	1438	13	FSM	ENSG00000104960.15	ENST00000598325.5	1438	13	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	361.055474346471	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTTTTAAAAACCTGCCT	20	True	NA	12	True	NA	NA	NA	49851019	49860725	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49851209_49854405_49854544_49854651_49854735_49854830_49854889_49854969_49855078_49856974_49857131_49857692_49857783_49857903_49857978_49858056_49858115_49858548_49858654_49859985_49860184_49860267_49860337_49860613
H1_mix_00044201	chr19	+	1577	13	FSM	ENSG00000104960.15	ENST00000599732.5	1577	13	0	0	0	0	multi-exon	FALSE	canonical	3	1100	junction_1	102.530347810891	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTCTCTGCTCACTGCC	9	False	NA	31	True	AATAAA	-19	NA	49851190	49860744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49851500_49854405_49854544_49854651_49854735_49854830_49854889_49854969_49855078_49856974_49857131_49857692_49857783_49857903_49857978_49858056_49858115_49858548_49858654_49859985_49860184_49860267_49860337_49860613
H1_mix_00044202	chr19	+	1587	13	FSM	ENSG00000104960.15	ENST00000601675.5	1587	13	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_12	308.965511829395	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTTCTCTGCTCAC	14	False	NA	27	True	AATAAA	-15	NA	49851224	49860740	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49851500_49854405_49854544_49854651_49854735_49854830_49854889_49854969_49855078_49856974_49857131_49857692_49857783_49857903_49857978_49858056_49858115_49858548_49858654_49859985_49860184_49860267_49860337_49860565
H1_mix_00044203	chr19	+	1716	8	FSM	ENSG00000104960.15	ENST00000597793.5	1716	8	0	0	0	0	multi-exon	FALSE	canonical	3	1195	junction_7	95.6338681362093	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTTCTCTGCTCAC	1077	False	NA	27	True	AATAAA	-15	NA	49856135	49860740	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49857131_49857692_49857783_49857903_49857978_49858056_49858115_49858548_49858654_49859985_49860184_49860267_49860337_49860613
H1_mix_00044208	chr19	+	1441	11	FSM	ENSG00000104946.14	ENST00000594984.1	1441	11	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_9	96.7514857767053	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATAAGCTGGCTTCAT	839	False	NA	-14	True	NA	NA	NA	49882265	49888707	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49882401_49882763_49882893_49882972_49883077_49883650_49883746_49884252_49884370_49884458_49884560_49884658_49884759_49887475_49887574_49887717_49887835_49888156_49888318_49888423
H1_mix_00044217	chr19	+	6862	42	NIC	ENSG00000105357.20	novel	5988	40	NA	NA	-1	0	intron_retention	FALSE	canonical	3	34	junction_15	19.0485774949366	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATCTCTGTGGCTGTGTG	-11	True	NA	18	True	AATAAA	-16	NA	50205456	50310539	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_50205555_50210362_50210771_50217614_50217772_50223082_50223111_50223246_50223350_50224153_50224178_50225584_50225678_50226902_50226967_50230524_50230624_50231929_50232071_50244241_50244338_50247003_50247123_50248986_50249140_50249649_50249824_50250514_50250689_50252638_50252754_50257298_50257487_50259143_50259266_50260645_50260716_50261474_50261636_50263311_50263421_50266876_50267009_50268160_50268368_50271408_50271547_50271848_50271973_50272559_50272732_50275990_50276204_50276756_50276902_50278082_50278290_50280036_50280142_50280230_50280384_50281593_50281843_50286481_50286695_50289435_50289649_50290886_50291049_50292260_50292390_50293232_50293322_50293563_50293688_50301660_50301870_50307048_50307158_50309004_50309178_50309639
H1_mix_00044220	chr19	+	1846	10	FSM	ENSG00000131408.15	ENST00000599105.5	1830	10	-16	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	144.895194136833	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTTTTATTTAATAAAAAC	-27	True	NA	15	True	NA	NA	NA	50376456	50382950	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_50376577_50376718_50376827_50377586_50377649_50377732_50377871_50378148_50378440_50378521_50378797_50379133_50379182_50379779_50379880_50381965_50382175_50382455
H1_mix_00044222	chr19	+	3486	27	FSM	ENSG00000062822.16	ENST00000440232.7	3436	27	-93	43	-27	0	multi-exon	FALSE	canonical	3	508	junction_1	91.4059237654119	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCGGGACCAGGGAGAATT	6530	False	NA	-19	True	NA	NA	NA	50384253	50417971	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_50384391_50398850_50399054_50399370_50399485_50401777_50401925_50401998_50402125_50402204_50402374_50402453_50402536_50402611_50402742_50403052_50403220_50403492_50403598_50406181_50406323_50406406_50406518_50406982_50407175_50407326_50407416_50408784_50408902_50409121_50409236_50409518_50409667_50413425_50413522_50413741_50413880_50414814_50414991_50415437_50415591_50415723_50415827_50416395_50416529_50416609_50416724_50417044_50417098_50417171_50417270_50417841
H1_mix_00044224	chr19	+	3486	27	FSM	ENSG00000062822.16	ENST00000599857.7	3467	27	-21	2	-21	0	multi-exon	FALSE	canonical	3	45	junction_1	158.785274234135	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGCTTTGTGGTCTCTGG	-5	True	NA	26	True	AATAAA	-20	NA	50384301	50418016	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_50384391_50398847_50399054_50399370_50399485_50401777_50401925_50401998_50402125_50402204_50402374_50402453_50402536_50402611_50402742_50403052_50403220_50403492_50403598_50406181_50406323_50406406_50406518_50406982_50407175_50407326_50407416_50408784_50408902_50409121_50409236_50409518_50409667_50413425_50413522_50413741_50413880_50414814_50414991_50415437_50415591_50415723_50415827_50416395_50416529_50416609_50416724_50417044_50417098_50417171_50417270_50417841
H1_mix_00044225	chr19	+	3543	28	FSM	ENSG00000062822.16	ENST00000601098.6	3524	28	-19	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	204.699297676215	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCGGGACCAGGGAGAATT	16	False	NA	-19	True	NA	NA	NA	50384322	50417971	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_50384391_50395024_50395151_50398850_50399054_50399370_50399485_50401777_50401925_50401998_50402125_50402204_50402374_50402453_50402536_50402611_50402742_50403052_50403220_50403492_50403598_50406181_50406323_50406406_50406518_50406982_50407175_50407326_50407416_50408784_50408902_50409121_50409236_50409518_50409667_50413425_50413522_50413741_50413880_50414814_50414991_50415437_50415591_50415723_50415827_50416395_50416529_50416609_50416724_50417044_50417098_50417171_50417270_50417841
H1_mix_00044226	chr19	+	999	7	ISM	ENSG00000062822.16	ENST00000600746.2	3565	26	86	15332	-6	-14005	5prime_fragment	FALSE	canonical	3	508	junction_1	91.6327209874047	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCGGAAGGGCCATGGCA	21	False	NA	NA	False	NA	NA	NA	50384366	50402665	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_50384391_50398850_50399054_50399370_50399485_50401777_50401925_50401998_50402374_50402453_50402536_50402611
H1_mix_00044227	chr19	+	737	4	FSM	ENSG00000062822.16	ENST00000597963.5	737	4	0	0	0	0	multi-exon	FALSE	canonical	3	892	junction_3	24.5809320861155	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGCTTTGTGGTCTCTGG	NA	False	NA	26	True	AATAAA	-20	NA	50416312	50418016	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_50416724_50417044_50417098_50417171_50417270_50417841
H1_mix_00044230	chr19	+	3805	6	FSM	ENSG00000269404.7	ENST00000595883.6	3792	6	-22	9	-22	-9	multi-exon	FALSE	canonical	3	26	junction_1	10.762899237659	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCGGGGTGTGGTGGCGT	NA	False	NA	NA	False	AATAAA	-4	NA	50418915	50431305	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_50418986_50419945_50419974_50422472_50422546_50422822_50423038_50423604_50423756_50428037
H1_mix_00044231	chr19	+	1555	5	ISM	ENSG00000269404.7	ENST00000595883.6	3792	6	870	2327	850	-2	3prime_fragment	FALSE	canonical	3	44	junction_2	6.92820323027551	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGATCCTTTTGTCATGT	-6	True	NA	19	True	NA	NA	NA	50419807	50428987	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_50419974_50422472_50422546_50422822_50423038_50423604_50423756_50428037
H1_mix_00044233	chr19	+	2369	8	FSM	ENSG00000161671.17	ENST00000376918.7	2014	8	-355	0	-256	0	multi-exon	TRUE	canonical	3	6	junction_6	35.0731015021425	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAGCCTCCTGCATTGTAT	NA	False	NA	-32	True	ATTAAA	-23	NA	50476143	50483351	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_50476659_50477928_50478002_50478956_50479067_50480110_50480216_50480580_50480763_50480883_50480978_50481860_50481948_50482148
H1_mix_00044236	chr19	+	399	2	NNC	ENSG00000235034.7	novel	477	2	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	3	251	junction_1	0	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTCTGCAAAATCTTG	4644	False	NA	12	True	TATAAA	-23	NA	50658474	50659310	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_50658510_50658946
H1_mix_00044237	chr19	+	498	2	FSM	ENSG00000235034.7	ENST00000490451.1	477	2	-21	0	-21	0	multi-exon	FALSE	canonical	3	32	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTCTGCAAAATCTTG	4644	False	NA	12	True	TATAAA	-23	NA	50658474	50659310	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_50658609_50658946
H1_mix_00044239	chr19	+	1514	4	FSM	ENSG00000105472.14	ENST00000250340.9	1375	4	-139	0	-139	0	multi-exon	FALSE	canonical	3	9	junction_1	6.18241233033047	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAGGGGCAGTGAAGGCA	NA	False	NA	17	True	AATAAA	-17	NA	50723224	50725708	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_50723673_50723904_50724092_50724409_50724602_50725021
H1_mix_00044242	chr19	+	6632	5	FSM	ENSG00000105497.8	ENST00000262259.7	6552	5	65	-145	44	145	multi-exon	FALSE	canonical	3	12	junction_4	2.27760839478607	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAGTTGAAAGAAAGAGAAA	56	False	NA	NA	False	NA	NA	NA	51571347	51592655	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_51571476_51573149_51573402_51581390_51581518_51581786_51581883_51586626
H1_mix_00044246	chr19	+	356	2	FSM	ENSG00000182310.15	ENST00000572609.1	342	2	-14	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTGTTTCATCTCCGAAG	4	True	NA	11	True	AATAAA	-18	NA	51704320	51705189	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_51704577_51705089
H1_mix_00044248	chr19	+	585	3	FSM	ENSG00000176024.18	ENST00000593395.1	585	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	26.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACCAAGATTTCTAGCCAG	NA	False	NA	NA	False	NA	NA	NA	51927146	51936125	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_51927541_51929731_51929825_51936027
H1_mix_00044252	chr19	+	2219	6	NIC	ENSG00000176024.18	novel	3165	6	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	35.8719946476356	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCAGTGAATGTGGTAGT	1	True	NA	0	True	AATAAA	-10	NA	51927471	51945747	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_51927541_51929731_51929825_51936027_51936236_51940208_51940336_51940616_51940710_51944118
H1_mix_00044260	chr19	+	2921	6	FSM	ENSG00000167554.15	ENST00000403906.8	2921	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	6.1773780845922	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTCTACATGCCTCT	-4	True	NA	NA	False	NA	NA	NA	52336242	52367778	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_52336507_52347706_52347945_52349153_52349236_52353681_52353809_52354250_52354380_52365697
H1_mix_00044263	chr19	+	547	4	FSM	ENSG00000198482.14	ENST00000486474.5	553	4	6	0	6	0	multi-exon	FALSE	canonical	3	10	junction_3	3.68178700572909	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGGTGAAATTGCTAATC	-3	True	NA	NA	False	NA	NA	NA	52527673	52553431	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_52527712_52532907_52533010_52543265_52543348_52553106
H1_mix_00044269	chr19	+	6482	4	FSM	ENSG00000213799.13	ENST00000458035.3	6348	4	-16	-118	-16	118	multi-exon	FALSE	canonical	3	29	junction_1	31.0304509939654	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGATCCAGGGGTGTTT	-19	True	NA	16	True	AATAAA	-17	NA	53333732	53357024	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_53333793_53341234_53341323_53345505_53345633_53350817
H1_mix_00044272	chr19	+	1876	4	FSM	ENSG00000203326.12	ENST00000475179.5	1868	4	-8	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	28.9865869364129	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAAAAGTCAAATGATG	-8	True	NA	-1	True	AATAAA	-19	NA	53365704	53386581	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_53365760_53372214_53372297_53375769_53375897_53384969
H1_mix_00044273	chr19	+	6155	4	FSM	ENSG00000203326.12	ENST00000474037.6	6133	4	-22	0	-10	0	multi-exon	FALSE	canonical	3	43	junction_1	14.8398861930347	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAAATGATGTAATTCCAT	NA	False	NA	8	True	AATAAA	-28	NA	53365682	53386590	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_53365760_53372214_53372297_53375769_53375897_53380721
H1_mix_00044278	chr19	+	4099	6	Fusion	ENSG00000241015.2_ENSG00000160336.17	novel	4061	5	NA	NA	0	-6	multi-exon	FALSE	canonical	0	0	junction_2	125.795707398941	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGATTTGGATGAGTTT	-3	True	NA	14	True	AATATA	-15	NA	53431983	53458254	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_+_53432029_53445000_53445124_53446226_53446338_53447195_53447284_53449511_53449639_53454649
H1_mix_00044283	chr19	+	3865	4	NIC	ENSG00000160336.17	novel	3983	5	NA	NA	0	-6	combination_of_known_splicesites	FALSE	canonical	3	49	junction_1	126.148941951788	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGATTTGGATGAGTTT	-3	True	NA	14	True	AATATA	-15	NA	53431983	53458254	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_53432029_53447195_53447284_53449511_53449639_53454649
H1_mix_00044284	chr19	+	902	5	ISM	ENSG00000160336.17	ENST00000610928.4	938	6	13008	0	0	0	3prime_fragment	FALSE	canonical	0	0	junction_1	149.646876011496	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGTGTGTCCTTAAGGC	NA	False	NA	12	True	AATAAA	-22	NA	53445000	53450331	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_53445124_53446226_53446338_53447195_53447284_53449511_53449639_53449878
H1_mix_00044286	chr19	+	4061	5	FSM	ENSG00000160336.17	ENST00000432094.6	4061	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	132.925496049479	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATGAGTTTTATTTCC	NA	False	NA	21	True	AATATA	-22	NA	53445000	53458261	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_53445124_53446226_53446338_53447195_53447284_53449511_53449639_53454649
H1_mix_00044300	chr19	+	3064	3	FSM	ENSG00000179820.16	ENST00000391770.9	3054	3	-10	0	-10	0	multi-exon	FALSE	canonical	3	120	junction_1	122.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTGTGCTTTCTTAATG	-21	True	NA	15	True	TATAAA	-11	NA	53867872	53876435	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_53867944_53869753_53869839_53873527
H1_mix_00044301	chr19	+	3124	3	FSM	ENSG00000179820.16	ENST00000391771.1	3111	3	-6	-7	-6	0	multi-exon	FALSE	canonical	2	10	junction_1	177.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTGTGCTTTCTTAATG	-17	True	NA	15	True	TATAAA	-11	NA	53867876	53876435	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_53867944_53869689_53869839_53873527
H1_mix_00044304	chr19	+	2997	19	FSM	ENSG00000126583.12	ENST00000682028.1	2997	19	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_18	10.0805398640458	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTCTCCCACCCGGCCA	-22	True	NA	-38	True	NA	NA	NA	53882188	53907594	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_53882665_53883162_53883195_53884160_53884244_53889637_53889750_53889885_53890018_53891673_53891831_53892508_53892644_53892987_53893076_53893361_53893392_53897958_53898112_53898439_53898629_53900232_53900325_53900418_53900482_53900610_53900750_53903072_53903154_53904634_53904743_53906316_53906458_53906706_53906892_53906993
H1_mix_00044311	chr19	+	448	5	FSM	ENSG00000170906.16	ENST00000451517.5	445	5	-3	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	1338.37401349548	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCGAACGTGAGCATGTG	-4	True	NA	18	True	AATAAA	-15	NA	54102851	54106961	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_54102889_54103113_54103189_54105596_54105704_54105933_54106012_54106810
H1_mix_00044312	chr19	+	355	4	FSM	ENSG00000170906.16	ENST00000391763.3	338	4	-17	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	1568.53420605212	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAACGTGAGCATGTGTGTG	-4	True	NA	22	True	AATAAA	-19	NA	54102851	54106965	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_54102899_54103113_54103189_54105933_54106012_54106810
H1_mix_00044313	chr19	+	948	4	FSM	ENSG00000170906.16	ENST00000485876.6	945	4	-3	0	0	0	multi-exon	FALSE	canonical	3	2221	junction_1	550.791753347448	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGCCAGTCACCTTCCT	-4	True	NA	NA	False	NA	NA	NA	54102851	54107568	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_54102889_54103113_54103189_54105933_54106012_54106810
H1_mix_00044314	chr19	+	541	3	FSM	ENSG00000170906.16	ENST00000484103.1	541	3	0	0	0	0	multi-exon	FALSE	canonical	3	3143	junction_2	196	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCGAACGTGAGCATGTG	21	False	NA	18	True	AATAAA	-15	NA	54102876	54106961	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_54103189_54105933_54106012_54106810
H1_mix_00044317	chr19	+	2269	13	FSM	ENSG00000105618.14	ENST00000419967.5	2269	13	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_1	82.9290191803944	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGGGAGTGATCATTTTT	9472	False	NA	32	True	ATTAAA	-22	NA	54115409	54131719	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_54115798_54118270_54118456_54118572_54118634_54121859_54121944_54122496_54122595_54123453_54123561_54123748_54123919_54124498_54124657_54126527_54126618_54128072_54128201_54128304_54128378_54129056_54129371_54131306
H1_mix_00044319	chr19	+	1833	14	FSM	ENSG00000105618.14	ENST00000321030.9	1833	14	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_1	80.0581149862269	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCCTTGGGGAGTGATC	-8	True	NA	26	True	ATTAAA	-16	NA	54115753	54131713	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_54115798_54118270_54118456_54118572_54118634_54121859_54121944_54122496_54122595_54123453_54123561_54123748_54123919_54124498_54124657_54126527_54126618_54128072_54128201_54128304_54128378_54129056_54129186_54129271_54129371_54131306
H1_mix_00044320	chr19	+	1840	11	FSM	ENSG00000105618.14	ENST00000466404.5	1837	11	-3	0	0	0	multi-exon	FALSE	canonical	3	627	junction_9	46.9498668794705	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCTGTCCTTGGGGAGT	2644	False	NA	22	True	ATTAAA	-12	NA	54118405	54131709	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_54118456_54118572_54118634_54121859_54121944_54122496_54122595_54123453_54123561_54123748_54123919_54124498_54124657_54126527_54126618_54128072_54128378_54129056_54129371_54131306
H1_mix_00044324	chr19	+	2807	18	NIC	ENSG00000088038.19	novel	2818	18	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	99	junction_7	89.0453404977479	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGGCAGCAGCGGCCTC	11	True	NA	27	True	AATAAA	-14	NA	54137775	54155681	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_54137994_54142928_54143004_54143118_54143187_54143441_54143517_54143659_54143750_54144005_54144135_54144236_54144333_54145594_54145818_54145909_54146044_54146600_54146658_54148147_54148536_54148619_54148744_54149559_54149759_54152225_54152326_54152427_54152627_54152866_54153000_54153714_54153841_54155308
H1_mix_00044330	chr19	+	2259	4	FSM	ENSG00000170892.13	ENST00000396388.3	2160	4	-965	866	0	0	multi-exon	FALSE	canonical	3	347	junction_2	20.4178571081514	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTTGAATGTTTGCGA	2	True	NA	10	True	AATAAA	-18	NA	54190342	54193666	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_54191608_54191720_54191965_54192115_54192374_54193174
H1_mix_00044331	chr19	+	2372	3	FSM	ENSG00000170892.13	ENST00000496583.1	2372	3	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_1	23	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTTGAATGTTTGCGA	2	True	NA	10	True	AATAAA	-18	NA	54190342	54193666	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_54191965_54192115_54192374_54193174
H1_mix_00044333	chr19	+	476	5	FSM	ENSG00000170889.14	ENST00000626547.2	476	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	3045.02307052016	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTGTGAACTCACCCAGA	-3	True	NA	NA	False	NA	NA	NA	54200857	54206565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_54200889_54201159_54201282_54201486_54201610_54206275_54206463_54206552
H1_mix_00044334	chr19	+	765	6	FSM	ENSG00000170889.14	ENST00000436445.5	752	6	-13	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	3543.57736757644	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGAAGGGCCAGGGTGGG	-3	True	NA	-99	True	NA	NA	NA	54200857	54207522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_54200894_54201159_54201282_54201486_54201610_54206275_54206463_54206552_54206725_54207397
H1_mix_00044335	chr19	+	713	5	FSM	ENSG00000170889.14	ENST00000302907.9	713	5	0	0	0	0	multi-exon	FALSE	canonical	3	4611	junction_1	1388.26411392069	1683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGTGGGGGTCTCTC	-3	True	NA	26	True	AATAAA	-20	NA	54200857	54207647	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_54200889_54201159_54201282_54201486_54201610_54206275_54206463_54207397
H1_mix_00044336	chr19	+	786	5	FSM	ENSG00000170889.14	ENST00000391752.5	772	5	-14	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	3291.45974455104	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGTGGGGGTCTCTC	-3	True	NA	26	True	AATAAA	-20	NA	54200857	54207647	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_54200962_54201159_54201282_54201486_54201610_54206275_54206463_54207397
H1_mix_00044337	chr19	+	1030	6	FSM	ENSG00000170889.14	ENST00000445961.5	944	6	-80	-6	-17	6	multi-exon	FALSE	canonical	3	51	junction_4	3613.29038965871	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGGGTCTCTCATCCTT	9504	False	NA	32	True	AATAAA	-26	NA	54200791	54207653	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_54200962_54201159_54201282_54201486_54201610_54206275_54206463_54206552_54206725_54207397
H1_mix_00044338	chr19	+	712	4	FSM	ENSG00000170889.14	ENST00000391753.6	709	4	-3	0	-3	0	multi-exon	FALSE	canonical	3	7190	junction_1	405.095050574553	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGTGGGGGTCTCTC	-10	True	NA	26	True	AATAAA	-20	NA	54201129	54207647	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_54201282_54201486_54201610_54206275_54206463_54207397
H1_mix_00044348	chr19	+	5910	15	ISM	ENSG00000167615.17	ENST00000326764.10	3658	16	-8	0	1	0	intron_retention	FALSE	canonical	3	75	junction_1	73.3693827596404	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCACGCTCCTGCTTTGT	-23	True	NA	16	True	ATTAAA	-16	NA	54449190	54462016	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_54449311_54451289_54451383_54452092_54452268_54452650_54452753_54453545_54453657_54454429_54454683_54454950_54455093_54455363_54455568_54455966_54456246_54456324_54456466_54456635_54456922_54457746_54457849_54457933_54458003_54458102_54458233_54458313
H1_mix_00044357	chr19	+	2610	20	FSM	ENSG00000131037.15	ENST00000201647.11	2569	20	-59	18	-43	0	multi-exon	FALSE	canonical	3	59	junction_1	36.4993074726546	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTCCGTGCTTAGCAGA	4	False	NA	6	True	TATAAA	-1	NA	55075809	55087905	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_55075920_55076407_55076462_55078087_55078129_55078998_55079058_55079689_55079852_55080128_55080279_55080771_55080855_55081230_55081493_55081772_55081900_55082091_55082181_55082274_55082350_55082453_55082603_55083377_55083520_55083615_55083645_55085840_55085974_55086060_55086193_55086391_55086519_55086713_55086889_55087302_55087436_55087527
H1_mix_00044358	chr19	+	2222	15	FSM	ENSG00000131037.15	ENST00000245618.5	2198	15	-24	0	-24	0	multi-exon	FALSE	canonical	3	40	junction_1	38.7814388593306	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGATGGTGTGCCAACTG	3974	False	NA	20	True	TATAAA	-15	NA	55080367	55087919	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_55080542_55080771_55080855_55081230_55081493_55081772_55081900_55082091_55082181_55082274_55082350_55082453_55082603_55083377_55083520_55083615_55083645_55085840_55085974_55086060_55086193_55086391_55086519_55086713_55086889_55087302_55087436_55087527
H1_mix_00044364	chr19	+	745	2	FSM	ENSG00000131037.15	ENST00000587715.1	745	2	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTCCGTGCTTAGCAGA	4113	False	NA	6	True	TATAAA	-1	NA	55087068	55087905	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_55087436_55087527
H1_mix_00044371	chr19	+	596	5	FSM	ENSG00000160472.5	ENST00000291934.4	605	5	5	4	5	-4	multi-exon	TRUE	canonical	1	3	junction_2	2.38484800354236	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACGTGTGTTCTCTTCTC	6	True	NA	NA	False	AATACA	-12	NA	55376830	55378242	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_55376912_55376990_55377027_55377592_55377719_55377801_55377887_55377974
H1_mix_00044373	chr19	+	1206	4	FSM	ENSG00000108107.15	ENST00000560583.5	1204	4	-2	0	0	0	multi-exon	FALSE	canonical	3	3972	junction_1	1069.87392819071	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTTATAACTGTAAGGGA	-1	True	NA	NA	False	NA	NA	NA	55385931	55388888	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_55385966_55386349_55386439_55386569_55386694_55387929
H1_mix_00044374	chr19	+	616	5	FSM	ENSG00000108107.15	ENST00000558815.5	616	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	2528.17002741113	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCACATGCCTATGACTA	-1	True	NA	48	True	TATAAA	-34	NA	55385931	55391803	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_55385966_55386349_55386439_55386569_55386694_55387929_55388049_55391553
H1_mix_00044375	chr19	+	4209	5	FSM	ENSG00000108107.15	ENST00000344063.7	4209	5	0	0	0	0	multi-exon	FALSE	canonical	3	3972	junction_1	945.461791930271	3825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTCATTATGAAATATGC	-1	True	NA	15	True	AATAAA	-17	NA	55385931	55392085	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_55385966_55386349_55386439_55386569_55386694_55387929_55388049_55388242
H1_mix_00044376	chr19	+	674	5	FSM	ENSG00000108107.15	ENST00000560055.5	670	5	-4	0	0	0	multi-exon	FALSE	canonical	3	3	junction_4	2534.61746374083	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAACTGAGTTTTACGGCA	-1	True	NA	19	True	ATTAAA	-22	NA	55385931	55403250	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_55385966_55386349_55386439_55386569_55386694_55387929_55388049_55402942
H1_mix_00044377	chr19	+	852	4	FSM	ENSG00000108107.15	ENST00000559463.5	852	4	0	0	0	0	multi-exon	FALSE	canonical	3	5886	junction_3	266.624996744283	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTCGACTGGGCCTCC	28	False	NA	33	True	AATAAA	-18	NA	55385960	55388373	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_55386439_55386569_55386694_55387929_55388049_55388242
H1_mix_00044378	chr19	+	3289	1	FSM	ENSG00000197483.10	ENST00000391718.3	3177	1	4	-116	4	2	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTTTCCTGGGGGG	4555	False	NA	21	True	AATAAA	-21	NA	55481200	55484489	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_55481200_55484500
H1_mix_00044380	chr19	+	2049	2	FSM	ENSG00000090971.5	ENST00000591590.1	1011	2	-79	-959	-72	0	multi-exon	FALSE	canonical	3	167	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCCTGTCTCTTCTCT	131	False	NA	41	True	AATAAA	-13	NA	55485115	55487566	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_55485259_55485660
H1_mix_00044385	chr19	+	1025	2	FSM	ENSG00000213015.9	ENST00000545125.1	1025	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTCAGGCTCTTCCTTGC	954	False	NA	14	True	AATAAA	-14	NA	55642096	55643469	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_55642149_55642496
H1_mix_00044386	chr19	+	1197	2	FSM	ENSG00000171425.10	ENST00000270451.6	1197	2	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_1	0	865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTCGAGGTTTGTTTTTA	22	True	NA	18	True	AATAAA	-18	NA	55643648	55645623	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_55643775_55644552
H1_mix_00044388	chr19	+	1546	6	FSM	ENSG00000173581.8	ENST00000308964.7	1546	6	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	40.00799920016	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCCTCAGCCTCTTCCT	17	True	NA	16	True	AATAAA	-1	NA	55648034	55653161	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_55648278_55649001_55649078_55649204_55649310_55649407_55649585_55651282_55651496_55652429
H1_mix_00044389	chr19	+	2362	6	FSM	ENSG00000173581.8	ENST00000588740.5	1404	6	-245	-713	-26	713	multi-exon	FALSE	canonical	3	19	junction_1	74.3220021258846	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGCCTGCGCGGCGGGAAG	441	False	NA	NA	False	NA	NA	NA	55647987	55653874	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_55648278_55648945_55649078_55649204_55649310_55649407_55649585_55651282_55651496_55652429
H1_mix_00044390	chr19	+	1837	6	FSM	ENSG00000173581.8	ENST00000591578.5	1592	6	-245	0	-26	0	multi-exon	FALSE	canonical	3	9	junction_1	78.2493450451823	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCCTCAGCCTCTTCCT	441	False	NA	16	True	AATAAA	-1	NA	55647987	55653161	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_55648278_55648757_55649078_55649204_55649310_55649407_55649585_55651282_55651496_55652429
H1_mix_00044397	chr19	+	1927	5	FSM	ENSG00000167685.15	ENST00000592949.5	1906	5	-28	7	6	0	multi-exon	FALSE	canonical	3	157	junction_4	94.1966029111454	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCGGAGTCTGAGCTCTGT	-2	True	NA	15	True	AATAAA	-15	NA	56141292	56160886	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_56141358_56146246_56146421_56146889_56147209_56158493_56158603_56159626
H1_mix_00044399	chr19	+	1895	5	NNC	ENSG00000167685.15	novel	5565	2	NA	NA	70	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	145.62172743104	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCGGAGTCTGAGCTCTGT	66	False	NA	15	True	AATAAA	-15	NA	56141390	56160886	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_56141421_56146246_56146421_56146889_56147209_56158493_56158603_56159623
H1_mix_00044400	chr19	+	2006	6	NNC	ENSG00000167685.15	novel	5565	2	NA	NA	70	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	163.487736543143	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCGGAGTCTGAGCTCTGT	66	False	NA	15	True	AATAAA	-15	NA	56141390	56160886	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_56141421_56142275_56142387_56146246_56146421_56146889_56147209_56158493_56158603_56159623
H1_mix_00044403	chr19	+	5781	2	FSM	ENSG00000167685.15	ENST00000587236.1	5565	2	-216	0	-216	0	multi-exon	FALSE	canonical	3	279	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCGGAGTCTGAGCTCTGT	NA	False	NA	15	True	AATAAA	-15	NA	56154084	56160886	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_56158603_56159623
H1_mix_00044409	chr19	+	3613	6	FSM	ENSG00000240225.10	ENST00000488113.5	1989	6	-146	-1478	0	0	multi-exon	FALSE	canonical	3	49	junction_5	52.5714751552589	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTTTGTCTTTTACTTTT	-33	True	NA	25	True	AATAGA	-20	NA	56368172	56379828	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_56368461_56368865_56368937_56373156_56373284_56373530_56373624_56374685_56374758_56376866
H1_mix_00044410	chr19	+	3541	5	FSM	ENSG00000240225.10	ENST00000495307.5	3393	5	-148	0	0	0	multi-exon	FALSE	canonical	3	106	junction_4	23.2849200127464	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTTTGTCTTTTACTTTT	-33	True	NA	25	True	AATAGA	-20	NA	56368172	56379828	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_56368461_56368865_56368937_56373156_56373284_56373530_56373624_56376866
H1_mix_00044412	chr19	+	1036	5	NNC	ENSG00000267454.6	novel	1606	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	16.8281757775464	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCACAGCTGTCTTGGTAA	29	True	NA	3	True	AATAAA	-14	NA	56393732	56399168	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_56394054_56394216_56394442_56397880_56397989_56398276_56398384_56398893
H1_mix_00044424	chr19	+	5912	4	FSM	ENSG00000197951.10	ENST00000599599.7	3558	4	-3	-2351	-1	356	multi-exon	FALSE	canonical	2	10	junction_2	50.4997249717483	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATATATCTATATGGGAT	0	True	NA	NA	False	AATAAA	-27	NA	56595298	56626837	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_56595429_56601506_56601592_56613811_56613939_56621267
H1_mix_00044425	chr19	+	794	3	FSM	ENSG00000083844.10	ENST00000600531.5	774	3	-20	0	-19	0	multi-exon	FALSE	canonical	3	12	junction_2	5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAGTGTCCGTTTCAAGT	-20	True	NA	28	True	AATAAA	-40	NA	57191480	57194969	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57191947_57193874_57194002_57194768
H1_mix_00044427	chr19	+	1301	7	FSM	ENSG00000105146.14	ENST00000302804.12	1287	7	-14	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4.81894409826699	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTCATAGTTGTGTGAG	5	False	NA	9	True	AATAAA	-21	NA	57231008	57235548	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57231307_57231741_57231788_57232032_57232225_57232541_57232681_57233459_57233609_57234883_57235059_57235246
H1_mix_00044429	chr19	+	9440	2	Fusion	ENSG00000268205.1_ENSG00000204524.7	novel	10169	4	NA	NA	17018	0	multi-exon	TRUE	canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTGTGCCATGAACTGG	NA	False	NA	NA	False	AATAAA	-25	NA	57257702	57308562	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_+_57259650_57301069
H1_mix_00044430	chr19	+	12156	1	FSM	ENSG00000268205.1	ENST00000593427.1	4258	1	-7898	0	-7898	0	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTGTGCCATGAACTGG	1876	False	NA	NA	False	AATAAA	-25	NA	57296406	57308562	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57296400_57308600
H1_mix_00044433	chr19	+	2045	1	FSM	ENSG00000256060.3	ENST00000596755.1	1743	1	-95	-207	-79	111	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTGAGACGGAGTT	-61	True	NA	NA	False	TATAAA	-40	NA	57363471	57365516	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57363500_57365500
H1_mix_00044435	chr19	+	744	2	FSM	ENSG00000256060.3	ENST00000543226.2	744	2	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTACATTCTGTCTCATGT	18	True	NA	57	True	AATGAA	-21	NA	57363550	57365405	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57363704_57364814
H1_mix_00044440	chr19	+	677	2	FSM	ENSG00000186230.7	ENST00000597296.1	677	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTTTCGTCTTAAGTTT	11	True	NA	13	True	TTTAAA	-4	NA	57435346	57438457	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57435668_57438101
H1_mix_00044441	chr19	+	601	2	NIC	ENSG00000186230.7	novel	677	2	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	66	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTTTCGTCTTAAGTTT	13	True	NA	13	True	TTTAAA	-4	NA	57435348	57438457	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_57435594_57438101
H1_mix_00044442	chr19	+	4695	1	FSM	ENSG00000276449.1	ENST00000620532.1	3323	1	-132	-1240	-132	1240	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCATTTATTTTATTATT	NA	False	NA	NA	False	AATACA	-34	NA	57449556	57454251	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57449600_57454300
H1_mix_00044444	chr19	+	2330	5	FSM	ENSG00000105136.22	ENST00000424930.6	2323	5	-7	0	-3	0	multi-exon	FALSE	canonical	3	17	junction_2	18.7799760383234	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTATTTCCCATACACC	-6	True	NA	3	True	NA	NA	NA	57487714	57494648	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57487984_57490146_57490186_57491467_57491598_57492112_57492212_57492855
H1_mix_00044445	chr19	+	2315	4	FSM	ENSG00000105136.22	ENST00000426954.6	2319	4	4	0	-3	0	multi-exon	FALSE	canonical	2	6	junction_1	26.2466929133727	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCATTTCCAGAGACTGA	-6	True	NA	27	True	AATAAA	-24	NA	57487714	57494672	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57487984_57491467_57491598_57492112_57492212_57492855
H1_mix_00044446	chr19	+	3749	5	FSM	ENSG00000105136.22	ENST00000221735.12	3742	5	-9	2	0	-1	multi-exon	FALSE	canonical	3	41	junction_2	8.92678553567856	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATATTAGCTTTTTATTG	-21	True	NA	NA	False	AATAAA	-23	NA	57487740	57496096	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57487984_57490146_57490186_57491470_57491598_57492112_57492212_57492855
H1_mix_00044448	chr19	+	5542	3	FSM	ENSG00000105136.22	ENST00000522346.1	5542	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTTATGACCATTTCCAG	203	False	NA	20	True	AATAAA	-17	NA	57487964	57494665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57491598_57492112_57492212_57492855
H1_mix_00044451	chr19	+	4104	4	FSM	ENSG00000121406.9	ENST00000376233.8	4090	4	-14	0	-14	0	multi-exon	FALSE	canonical	3	66	junction_1	4.71404520791032	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTCTAATTTGTCTGTT	0	True	NA	3	True	AATGAA	-17	NA	57527341	57540876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57527607_57531069_57531109_57535143_57535271_57537203
H1_mix_00044458	chr19	+	4857	2	FSM	ENSG00000213762.12	ENST00000597975.1	559	2	-15	-4283	-15	6	multi-exon	FALSE	canonical	3	106	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGTCACTGAATTCTTTCA	-24	True	NA	22	True	AATAAA	-27	NA	57614217	57624730	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57614504_57620159
H1_mix_00044459	chr19	+	4948	3	FSM	ENSG00000213762.12	ENST00000396161.10	4924	3	-24	0	-15	0	multi-exon	FALSE	canonical	3	289	junction_1	3.5	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGACTCGTCACTGAATT	-24	True	NA	16	True	AATAAA	-21	NA	57614217	57624724	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57614504_57619411_57619509_57620159
H1_mix_00044460	chr19	+	6182	4	FSM	ENSG00000121417.14	ENST00000240731.5	3773	4	-2409	0	364	0	multi-exon	FALSE	canonical	3	22	junction_1	28.2881993457028	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTCTTCATATGTGCATT	NA	False	NA	4	True	AATAAA	-16	NA	57630758	57644041	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57633437_57634022_57634062_57634628_57634756_57640703
H1_mix_00044469	chr19	+	5272	3	FSM	ENSG00000152443.13	ENST00000317178.10	5262	3	-10	0	-10	0	multi-exon	FALSE	canonical	3	70	junction_1	2.5	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAATGCAATTCTTCATA	-12	True	NA	23	True	AATAAA	-18	NA	57746804	57758148	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57747092_57750784_57750912_57753290
H1_mix_00044475	chr19	+	540	4	FSM	ENSG00000268750.7	ENST00000597134.5	540	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	21.5612821717283	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTGCTCACGCTCACC	8	False	NA	NA	False	NA	NA	NA	57819718	57856233	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57819946_57820493_57820550_57839022_57839150_57856103
H1_mix_00044476	chr19	+	7545	4	FSM	ENSG00000268750.7	ENST00000596498.2	769	4	-158	-6618	-151	6618	multi-exon	FALSE	canonical	3	11	junction_2	22.4251842554055	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCTGTAATCCCAGCTAC	NA	False	NA	NA	False	ACTAAA	-14	NA	57819567	57865559	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57819946_57820493_57820550_57856106_57856234_57858575
H1_mix_00044479	chr19	+	5795	3	FSM	ENSG00000269343.9	ENST00000594901.2	5794	3	-1	0	-1	0	multi-exon	FALSE	canonical	3	41	junction_1	12	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGGGTGCTCTCCTGCA	-10	True	NA	17	True	AATAAA	-17	NA	57830297	57846238	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57830565_57839022_57839150_57840837
H1_mix_00044480	chr19	+	589	4	FSM	ENSG00000268750.7	ENST00000604231.1	576	4	-13	0	-13	0	multi-exon	FALSE	canonical	2	5	junction_2	22.8083805260747	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGAGCAGGACTCCTAGG	-9	True	NA	NA	False	NA	NA	NA	57830298	57858641	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57830565_57839022_57839150_57856103_57856234_57858575
H1_mix_00044481	chr19	+	554	2	FSM	ENSG00000198466.12	ENST00000484707.1	545	2	-9	0	-8	0	multi-exon	FALSE	canonical	3	25	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGGGGAGTTTCATTCA	8	True	NA	23	True	CATAAA	-23	NA	57849850	57854108	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57850072_57853775
H1_mix_00044482	chr19	+	6893	3	FSM	ENSG00000198466.12	ENST00000339656.8	6885	3	-8	0	-8	0	multi-exon	FALSE	canonical	2	8	junction_1	26	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCATACCTCTTTCCTGT	8	True	NA	27	True	ATTAAA	-28	NA	57849850	57865117	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57850072_57856103_57856234_57858575
H1_mix_00044488	chr19	+	853	3	FSM	ENSG00000152467.10	ENST00000601162.1	813	3	-35	-5	-35	3	multi-exon	FALSE	canonical	3	18	junction_1	1	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATCTGTCCTGTGGCTTTG	52	False	NA	13	True	ATTAAA	-23	NA	58034070	58038447	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_58034162_58035969_58036012_58037727
H1_mix_00044491	chr19	+	3153	8	NNC	ENSG00000171606.18	novel	2808	8	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_6	37.9881829101673	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTGTGTATTTCCTGCC	-14	True	NA	30	True	AATAAA	-22	NA	58183072	58213562	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_58183443_58183920_58183999_58185711_58185839_58186946_58187043_58206719_58207203_58209960_58210431_58211559_58211687_58212160
H1_mix_00044492	chr19	+	2426	7	ISM	ENSG00000171606.18	ENST00000610905.4	2559	8	467	-10	0	0	3prime_fragment	FALSE	canonical	3	106	junction_4	6.32455532033676	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTGTGTATTTCCTGCC	516	False	NA	30	True	AATAAA	-22	NA	58183920	58213562	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_58183999_58185711_58185839_58186946_58187043_58206719_58207203_58209960_58210074_58211559_58211687_58212160
H1_mix_00044496	chr19	+	3286	7	FSM	ENSG00000198131.15	ENST00000687789.1	3302	7	16	0	-9	0	multi-exon	FALSE	canonical	3	81	junction_6	49.7929044476553	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGAGTCTGCAGTTTCT	14	True	NA	NA	False	AATAAA	-18	NA	58228929	58263644	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_58228947_58229467_58229571_58230393_58230463_58243964_58244057_58246300_58246428_58246710_58246795_58260850
H1_mix_00044497	chr19	+	749	7	NNC	ENSG00000198131.15	novel	555	7	NA	NA	-8	-2624	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_6	67.9656776125519	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCCCTCATGACTAATAC	15	True	NA	36	True	AATAAA	-43	NA	58228930	58274623	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_58228947_58229467_58229571_58230393_58230463_58243964_58244057_58246300_58246428_58246710_58246795_58274365
H1_mix_00044499	chr19	+	3516	7	FSM	ENSG00000198131.15	ENST00000596825.5	3516	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	77.9602819104418	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGAGTCTGCAGTTTCT	59	False	NA	NA	False	AATAAA	-18	NA	58228974	58263644	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_58229257_58229467_58229571_58230393_58230463_58243964_58244057_58246300_58246428_58246745_58246795_58260850
H1_mix_00044500	chr19	+	895	7	FSM	ENSG00000198131.15	ENST00000595981.5	895	7	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_6	91.0544708768694	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGTGGTTTGAATGCAA	381	False	NA	48	True	AAAAAG	-8	NA	58229467	58277495	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_58229571_58230393_58230463_58243964_58244057_58246300_58246428_58246710_58246795_58276322_58276430_58277182
H1_mix_00044505	chr19	+	941	4	FSM	ENSG00000142396.10	ENST00000427361.5	922	4	-19	0	-19	0	multi-exon	FALSE	canonical	3	53	junction_2	136.252217107343	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTTTTGTCTGTCTCAT	NA	False	NA	21	True	NA	NA	NA	58305354	58315202	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_58305446_58306087_58306217_58312196_58312463_58314747
H1_mix_00044507	chr19	+	6199	2	FSM	ENSG00000142396.10	ENST00000590505.1	3889	2	-1861	-449	1081	-11	multi-exon	FALSE	canonical	3	304	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTACAGGTGTTTGTGTGG	1504	False	NA	12	True	TATAAA	-21	NA	58307168	58315652	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_58312463_58314747
H1_mix_00044508	chr19	+	4654	3	FSM	ENSG00000182318.6	ENST00000329665.5	4654	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0.5	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGTGTAAAGACAAATTC	-3	True	NA	6	True	AATAAA	-20	NA	58326993	58342332	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_58327115_58334751_58335206_58338253
H1_mix_00044512	chr19	+	538	5	FSM	ENSG00000083845.9	ENST00000598098.5	536	5	0	-2	0	0	multi-exon	FALSE	canonical	3	38	junction_2	3560.2247471192	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGTTGTCTGTCTTCG	-8	True	NA	33	True	AATAAA	-33	NA	58387263	58394806	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_58387340_58388136_58388246_58393358_58393488_58394496_58394596_58394681
H1_mix_00044513	chr19	+	1520	5	FSM	ENSG00000083845.9	ENST00000596046.1	1520	5	0	0	0	0	multi-exon	FALSE	canonical	3	7525	junction_4	423.263806626553	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGTTGTCTGTCTTCG	3	False	NA	33	True	AATAAA	-33	NA	58387288	58394806	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_58388246_58392975_58393186_58393358_58393488_58394496_58394596_58394681
H1_mix_00044517	chr19	+	2135	3	NIC	ENSG00000171574.18	novel	2308	4	NA	NA	-9	-2	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	6.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAATTTTTTTTTTATTT	3	True	NA	9	True	AATAAA	-21	NA	58408664	58418321	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_58409166_58415523_58415647_58416810
H1_mix_00044524	chr19	+	2058	7	FSM	ENSG00000083838.17	ENST00000594369.6	2050	7	-8	0	-8	0	multi-exon	FALSE	canonical	1	5	junction_1	9.74679434480896	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGTTTCTGAATAAGAAT	9241	False	NA	7	True	CATAAA	-17	NA	58476343	58481230	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_58476505_58477178_58477561_58477636_58477827_58478086_58478182_58479642_58479728_58479929_58480020_58480175
H1_mix_00044527	chr19	+	2716	15	FSM	ENSG00000130726.12	ENST00000341753.10	2709	15	0	-7	0	0	multi-exon	FALSE	canonical	3	24	junction_1	757.6869103275	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGGCTGGTTGGGGGACT	15	False	NA	41	True	AATAAA	-21	NA	58544472	58550722	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_58545098_58547375_58547512_58547596_58547714_58547791_58547907_58548033_58548181_58548293_58548409_58548485_58548593_58548739_58548777_58548861_58548911_58548987_58549241_58549330_58549651_58549736_58549861_58549948_58550036_58550146_58550285_58550376
H1_mix_00044528	chr19	+	2956	17	NNC	ENSG00000130726.12	novel	3364	17	NA	NA	1	-2	intron_retention	FALSE	canonical	3	65	junction_10	706.034920236776	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGTTGGCTGGTTGGGGGA	16	False	NA	39	True	AATAAA	-19	NA	58544473	58550720	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_58545098_58545424_58545538_58545763_58545897_58547375_58547512_58547596_58547714_58547791_58547907_58548033_58548181_58548293_58548409_58548485_58548593_58548739_58548777_58548864_58548911_58548987_58549241_58549330_58549651_58549736_58549861_58549948_58550036_58550146_58550285_58550376
H1_mix_00044535	chr19	+	749	3	NNC	ENSG00000286104.1	novel	944	3	NA	NA	11	-10085	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTTGGAATCCATGTA	12	True	NA	NA	False	ATTAAA	-16	NA	58575466	58589490	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_58575589_58586154_58586357_58589065
H1_mix_00044536	chr19	-	5051	2	FSM	ENSG00000282458.1	ENST00000631796.1	714	2	-628	-3709	-25	0	multi-exon	FALSE	canonical	3	146	junction_1	0	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAATTGTCTGAGCCTTG	NA	False	NA	NA	False	NA	NA	NA	71591	62112	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_66500_70927
H1_mix_00044537	chr19	-	398	3	FSM	ENSG00000282458.1	ENST00000632089.1	398	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	69	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGAGTGCATTAACTCA	19	False	NA	NA	False	TATAAA	-16	NA	70945	65821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_66048_66345_66500_70927
H1_mix_00044539	chr19	-	757	1	FSM	ENSG00000282416.1	ENST00000632679.1	757	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCGGCCTCACAGCGGAC	NA	False	NA	NA	False	NA	NA	NA	198066	197309	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_197300_198100
H1_mix_00044540	chr19	-	676	1	FSM	ENSG00000282339.1	ENST00000632795.1	676	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCTCCTCCCTCACGGT	NA	False	NA	NA	False	NA	NA	NA	201174	200498	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_200500_201200
H1_mix_00044541	chr19	-	459	2	FSM	ENSG00000282508.2	ENST00000631412.1	459	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCCCAGCCTCTGCCTCC	NA	False	NA	NA	False	NA	NA	NA	204024	201353	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_201663_203874
H1_mix_00044542	chr19	-	564	3	FSM	ENSG00000282508.2	ENST00000631864.1	564	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	13	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCCTCCAGGCCCAGCCT	NA	False	NA	NA	False	NA	NA	NA	204079	201361	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_201663_201755_201814_203874
H1_mix_00044544	chr19	-	1394	6	FSM	ENSG00000141934.10	ENST00000327790.7	1397	6	0	3	0	0	multi-exon	FALSE	canonical	3	22	junction_5	327.865582213199	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCTCAGTGCTTCTGTTC	211	False	NA	-5	True	AGTAAA	-22	NA	291185	281042	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_281538_282133_282311_282751_282810_287473_287752_288019_288172_290951
H1_mix_00044545	chr19	-	1228	6	FSM	ENSG00000141934.10	ENST00000269812.7	1228	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	320.72318282282	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCTCAGTGCTTCTGTTC	3	True	NA	-5	True	AGTAAA	-22	NA	291393	281042	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_281538_282133_282311_282751_282810_287473_287752_288019_288172_291325
H1_mix_00044546	chr19	-	1279	6	FSM	ENSG00000141934.10	ENST00000434325.7	1279	6	0	0	0	0	multi-exon	FALSE	canonical	3	681	junction_5	74.0448512727252	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCTCAGTGCTTCTGTTC	-7	True	NA	-5	True	AGTAAA	-22	NA	291403	281042	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_281538_282133_282311_282751_282810_287473_287752_288019_288172_291284
H1_mix_00044547	chr19	-	6455	3	FSM	ENSG00000141934.10	ENST00000621795.1	6455	3	0	0	0	0	multi-exon	FALSE	canonical	3	766	junction_2	62	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGGTCTCAGTGCTTCTG	2859	False	NA	-8	True	AGTAAA	-19	NA	288537	281045	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_281538_282133_282311_282751
H1_mix_00044549	chr19	-	1752	4	FSM	ENSG00000105556.12	ENST00000619835.4	1748	4	0	-4	0	4	multi-exon	FALSE	canonical	3	24	junction_3	112.490987293304	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGGTGGATCGGGTGG	3042	False	NA	1	True	ATTAAA	-22	NA	308923	305568	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_306712_307118_307537_308576_308666_308821
H1_mix_00044550	chr19	-	3986	14	NNC	ENSG00000105556.12	novel	2769	14	NA	NA	258	4	intron_retention	FALSE	canonical	3	14	junction_13	66.3864426167995	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGGTGGATCGGGTGG	286	False	NA	1	True	ATTAAA	-22	NA	344520	305568	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_306712_307118_307537_308576_308666_308800_308926_311844_311940_312190_312273_313491_313644_325634_325705_326506_326599_327132_327257_327863_327990_334399_334543_336082_336174_343284
H1_mix_00044551	chr19	-	2773	14	FSM	ENSG00000105556.12	ENST00000264819.7	2769	14	0	-4	0	4	multi-exon	FALSE	canonical	3	159	junction_13	31.2832072085718	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGGTGGATCGGGTGG	10	True	NA	1	True	ATTAAA	-22	NA	344796	305568	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_306712_307118_307537_308576_308666_308800_308926_311844_311940_312190_312273_313491_313644_325634_325705_326506_326599_327132_327257_327863_327990_334399_334543_336082_336174_344773
H1_mix_00044554	chr19	-	3112	2	FSM	ENSG00000183186.8	ENST00000332235.8	3099	2	0	-13	0	13	multi-exon	FALSE	canonical	3	50	junction_1	0	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGCTTCCCTGGCTGTTT	-2	True	NA	-6	True	AATAAA	-27	NA	409147	405431	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_408402_409005
H1_mix_00044555	chr19	-	1691	2	FSM	ENSG00000129946.11	ENST00000587423.5	1691	2	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	0	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAAGCCCACCTGCATAT	NA	False	NA	-4	True	ATTAAA	-20	NA	419879	416588	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_417323_418922
H1_mix_00044556	chr19	-	2112	3	FSM	ENSG00000129946.11	ENST00000588376.5	1551	3	-320	-241	-320	241	multi-exon	FALSE	canonical	3	138	junction_1	12.5	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCAACTTCTCCACTAAA	NA	False	NA	-36	True	GATAAA	-5	NA	423148	416347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_417323_418922_419057_422145
H1_mix_00044557	chr19	-	2777	13	FSM	ENSG00000129946.11	ENST00000264554.11	2525	13	0	-252	0	252	multi-exon	TRUE	canonical	3	90	junction_8	18.4275985654368	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACTAAACACTTCTCTCA	-1	True	NA	-25	True	GATAAA	-16	NA	461033	416336	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_417323_418922_419057_422145_422457_425096_425232_430683_430748_434708_434866_436164_436292_436379_436432_436629_436684_438717_438838_438969_439031_440861_440933_460528
H1_mix_00044558	chr19	-	420	3	FSM	ENSG00000181781.10	ENST00000591681.3	534	3	114	0	114	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGGTGGTGGGCCGCACC	2481	False	NA	NA	False	GGGGCT	-34	NA	472501	464166	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_464365_467648_467763_472393
H1_mix_00044559	chr19	-	1390	2	FSM	ENSG00000267751.6	ENST00000589457.3	733	2	21	-678	-8	286	multi-exon	FALSE	canonical	3	85	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGTCCTGCGTCTGTA	-7	True	NA	-3	True	NA	NA	NA	571736	566531	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_567625_571439
H1_mix_00044560	chr19	-	636	3	FSM	ENSG00000267751.6	ENST00000588908.6	1041	3	18	387	-8	0	multi-exon	FALSE	canonical	3	10	junction_1	33.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAATTAATTGCGAGAATG	-7	True	NA	-7	True	NA	NA	NA	571736	567209	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_567649_571439_571597_571696
H1_mix_00044561	chr19	-	509	3	FSM	ENSG00000267751.6	ENST00000590292.6	1042	3	40	493	-6	-101	multi-exon	FALSE	canonical	3	77	junction_2	4	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCTGCTCTCGCTAGA	-5	True	NA	-8	True	NA	NA	NA	571734	567310	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_567625_571439_571597_571696
H1_mix_00044562	chr19	-	3771	21	FSM	ENSG00000099821.14	ENST00000588649.7	3771	21	0	0	0	0	multi-exon	TRUE	canonical	3	732	junction_14	77.7839315025925	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGTCTTCAGGAAGGG	1	True	NA	-29	True	AATAAA	-22	NA	633537	617220	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_617324_617418_617481_617569_617656_617776_617850_618487_618587_618704_618761_618996_619111_619209_619297_619585_619766_619957_620081_620364_620488_621057_621847_622148_622374_622581_622753_622820_622986_623453_623604_624718_624906_625123_625255_629539_630169_632833_632939_633424
H1_mix_00044563	chr19	-	469	4	FSM	ENSG00000099821.14	ENST00000592633.5	469	4	0	0	0	0	multi-exon	FALSE	canonical	3	910	junction_1	38.0555150040335	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCCACTGTCTTCAGGAA	NA	False	NA	-32	True	AATAAA	-19	NA	617997	617223	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_617324_617418_617481_617569_617656_617776
H1_mix_00044564	chr19	-	1231	4	FSM	ENSG00000099821.14	ENST00000587057.5	1229	4	0	-2	0	-2	multi-exon	FALSE	canonical	3	779	junction_3	80.8056653679403	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGAGCCACTGTCTTCAGG	NA	False	NA	-34	True	AATAAA	-17	NA	618758	617225	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_617324_617418_617481_617569_618587_618704
H1_mix_00044565	chr19	-	490	5	FSM	ENSG00000099821.14	ENST00000589961.2	490	5	0	0	0	0	multi-exon	FALSE	canonical	3	769	junction_3	93.5584710221367	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTTTGTCCGCTTGCAC	NA	False	NA	NA	False	NA	NA	NA	619226	617645	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_617850_618487_618587_618704_618761_618996_619111_619209
H1_mix_00044566	chr19	-	2142	9	FSM	ENSG00000070423.18	ENST00000605891.5	1671	9	-142	-329	-103	329	multi-exon	TRUE	canonical	3	32	junction_6	330.813556818641	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCAAGGTTGCTGGATGC	NA	False	NA	NA	False	NA	NA	NA	663336	647196	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_648278_648371_648488_648881_648976_649678_649749_650233_650297_651610_651916_652232_652297_652825_652885_663046
H1_mix_00044567	chr19	-	2099	4	FSM	ENSG00000070423.18	ENST00000586749.1	2092	4	0	-7	0	3	multi-exon	FALSE	canonical	3	972	junction_2	43.6526695123626	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTGTGGCTTTCCTTCT	9884	False	NA	0	True	AATACA	-20	NA	650594	647522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_648278_648371_648488_648881_649749_650233
H1_mix_00044568	chr19	-	1634	9	FSM	ENSG00000070423.18	ENST00000292363.10	1631	9	0	-3	0	3	multi-exon	FALSE	canonical	3	872	junction_5	77.3239936888932	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTGTGGCTTTCCTTCT	-4	True	NA	0	True	AATACA	-20	NA	663214	647522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_648278_648371_648488_648881_648976_649678_649749_650233_650297_651610_651856_652232_652297_652825_652885_663046
H1_mix_00044571	chr19	-	2599	7	ISM	ENSG00000129951.19	ENST00000520876.8	2306	8	36	0	33	0	intron_retention	FALSE	canonical	3	524	junction_2	41.1477689418137	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCGGCTCTTGGTCATTC	-4	True	NA	-23	True	AATAAA	-15	NA	821919	812487	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_813896_814433_814608_814691_814750_814885_815082_815185_815328_815665_815852_821484
H1_mix_00044572	chr19	-	2672	8	FSM	ENSG00000129951.19	ENST00000520876.8	2306	8	0	-366	0	366	multi-exon	FALSE	canonical	3	399	junction_7	80.3487297183156	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAGCCTGGAATTGCTGT	1	True	NA	NA	False	NA	NA	NA	821955	812121	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_813896_814433_814608_814691_814750_814885_815082_815185_815328_815665_815852_821484_821586_821914
H1_mix_00044573	chr19	-	782	3	FSM	ENSG00000129951.19	ENST00000519502.2	782	3	0	0	0	0	multi-exon	FALSE	canonical	3	626	junction_1	16.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGGTGCGGTTTGTGGGTG	1	True	NA	NA	False	NA	NA	NA	821955	815202	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_815328_815665_815852_821484
H1_mix_00044574	chr19	-	3410	15	FSM	ENSG00000175221.16	ENST00000395808.7	3420	15	10	0	8	0	multi-exon	TRUE	canonical	3	264	junction_5	52.3360413528746	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCTGTTTCTGTGTCTCT	3	True	NA	NA	False	NA	NA	NA	893208	867629	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_868500_868862_868947_871036_871254_871925_872119_873448_873583_875243_875455_876973_877181_879936_880149_881558_881715_884902_885009_885769_886202_889637_889808_890136_890245_890962_891150_893085
H1_mix_00044575	chr19	-	2892	16	FSM	ENSG00000175221.16	ENST00000325464.6	2892	16	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	105.080075286527	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCCGCGTCCCTGCCGTCG	-4	True	NA	-4	True	AATAAA	-16	NA	893187	867962	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_868252_868415_868500_868862_868947_871036_871254_871925_872119_873448_873583_875243_875455_876973_877181_879936_880149_881558_881715_884902_885009_885769_886202_889637_889808_890136_890245_890962_891150_893085
H1_mix_00044576	chr19	-	1803	8	FSM	ENSG00000198858.10	ENST00000361574.10	1803	8	0	0	0	0	multi-exon	TRUE	canonical	3	588	junction_7	46.2839505836813	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGGCTATGTGTGTTTTT	-26	True	NA	-7	True	AATAAA	-17	NA	913219	896502	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_897541_899439_899496_899600_899687_900060_900147_900828_900953_901421_901547_901975_902131_913086
H1_mix_00044577	chr19	-	1704	7	FSM	ENSG00000198858.10	ENST00000589428.5	1704	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	241.957985333542	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGGCTATGTGTGTTTTT	4420	False	NA	-7	True	AATAAA	-17	NA	913245	896502	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_897541_899439_899496_899600_899687_900060_900147_900828_900953_901975_902131_913086
H1_mix_00044579	chr19	-	2544	10	FSM	ENSG00000182087.14	ENST00000586704.5	2538	10	0	-6	0	1	multi-exon	FALSE	canonical	3	38	junction_9	584.390470680539	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGCTGTGTGTGTGTCTTG	281	False	NA	-25	True	AATAAA	-23	NA	1020851	1009646	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1010896_1010990_1011096_1011366_1011500_1011579_1011664_1011740_1011799_1011891_1011993_1012065_1012574_1013240_1013341_1014191_1014318_1020771
H1_mix_00044580	chr19	-	2693	11	FSM	ENSG00000182087.14	ENST00000356663.8	2687	11	0	-6	0	1	multi-exon	FALSE	canonical	3	901	junction_4	210.787096379261	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGCTGTGTGTGTGTCTTG	9	True	NA	-25	True	AATAAA	-23	NA	1021123	1009646	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1010896_1011095_1011196_1011366_1011500_1011579_1011664_1011740_1011799_1011891_1011993_1012065_1012189_1012462_1012574_1013240_1013341_1014191_1014474_1020771
H1_mix_00044581	chr19	-	2754	11	FSM	ENSG00000182087.14	ENST00000593068.7	2753	11	0	-1	0	1	multi-exon	FALSE	canonical	3	68	junction_2	513.45719393149	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGCTGTGTGTGTGTCTTG	NA	False	NA	-25	True	AATAAA	-23	NA	1021179	1009646	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1010896_1010990_1011096_1011366_1011500_1011579_1011664_1011740_1011799_1011891_1011993_1012065_1012189_1012462_1012574_1013240_1013341_1014191_1014474_1020771
H1_mix_00044582	chr19	-	1637	1	FSM	ENSG00000182087.14	ENST00000592052.1	1637	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATTCTATTTAATTGCAG	9776	False	NA	-40	True	NA	NA	NA	1011356	1009719	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1009700_1011400
H1_mix_00044585	chr19	-	2854	8	FSM	ENSG00000099817.12	ENST00000615234.5	2854	8	0	0	0	0	multi-exon	FALSE	canonical	3	3537	junction_1	328.412632434955	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTGGCTTCCGAGAGACCC	-19	True	NA	0	True	AATAAA	-22	NA	1095375	1086573	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1088721_1089471_1089552_1089883_1089963_1090086_1090146_1090907_1090989_1091791_1091908_1093903_1094079_1095258
H1_mix_00044586	chr19	-	1749	8	FSM	ENSG00000099817.12	ENST00000612655.4	1749	8	0	0	0	0	multi-exon	FALSE	canonical	2	70	junction_1	1392.224603625	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCCAAAGGGACAAACACT	-24	True	NA	NA	False	NA	NA	NA	1095380	1087644	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1088682_1089471_1089552_1089883_1089963_1090086_1090146_1090907_1090989_1091791_1091908_1093903_1094079_1095258
H1_mix_00044587	chr19	-	1105	7	FSM	ENSG00000099817.12	ENST00000589737.5	1105	7	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_6	1375.44489772098	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTCCAGCAGGTGGCCTT	-19	True	NA	NA	False	AATAAA	-34	NA	1095375	1088147	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1088721_1089471_1089552_1089883_1089963_1090086_1090146_1090907_1090989_1091791_1091908_1095258
H1_mix_00044588	chr19	-	1623	7	FSM	ENSG00000099817.12	ENST00000586817.5	2441	7	831	-13	717	-6	multi-exon	FALSE	canonical	3	3537	junction_1	251.632503199938	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAAGGTTTCCAGCAGGT	9210	False	NA	NA	False	AATAAA	-28	NA	1094544	1088153	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1088721_1089471_1089552_1089883_1089963_1090086_1090146_1090907_1090989_1091791_1091908_1093903
H1_mix_00044590	chr19	-	4910	32	FSM	ENSG00000064932.16	ENST00000361757.8	4906	32	0	-4	0	3	multi-exon	TRUE	canonical	3	41	junction_4	9.22952778545901	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGAGTCTGCTCCTCAGCCT	-11	True	NA	-3	True	AATATA	-23	NA	1174268	1107633	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1108705_1108778_1108970_1109134_1109212_1109291_1109424_1109505_1109599_1109682_1109778_1110744_1110889_1111018_1111094_1111505_1111615_1111995_1112068_1112188_1112302_1112401_1112538_1112817_1112950_1113534_1113705_1114230_1114423_1116020_1116104_1116828_1116927_1117322_1117500_1119010_1119165_1119515_1119622_1119905_1120024_1122138_1122283_1122467_1122559_1122657_1122792_1122893_1123046_1123533_1123640_1123941_1124023_1127603_1127766_1147308_1147421_1149368_1149443_1154183_1154403_1174171
H1_mix_00044591	chr19	-	3303	10	FSM	ENSG00000099625.14	ENST00000650044.2	3281	10	-22	0	0	0	multi-exon	TRUE	canonical	3	50	junction_4	18.9626012696987	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGCTTGCTCCGGGTTT	NA	False	NA	-19	True	TATAAA	-14	NA	1238027	1228286	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1230143_1231100_1231276_1233425_1233637_1234190_1234332_1234570_1234743_1235000_1235146_1235500_1235566_1235778_1235919_1235995_1236122_1237755
H1_mix_00044592	chr19	-	4261	9	FSM	ENSG00000099625.14	ENST00000590083.5	4261	9	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	19.9181920615301	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGCTTGCTCCGGGTTT	NA	False	NA	-19	True	TATAAA	-14	NA	1238027	1228286	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1231276_1233425_1233637_1234190_1234332_1234570_1234743_1235000_1235146_1235500_1235566_1235778_1235919_1235995_1236122_1237755
H1_mix_00044594	chr19	-	1110	6	FSM	ENSG00000130005.13	ENST00000252288.8	1110	6	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_1	41.581726755872	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGTGACTCCCCTCCA	-13	True	NA	50	True	NA	NA	NA	1401542	1397025	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1397500_1398915_1399027_1399127_1399196_1399523_1399588_1399792_1399939_1401295
H1_mix_00044595	chr19	-	1985	5	FSM	ENSG00000130005.13	ENST00000447102.8	1769	5	-181	-35	-181	35	multi-exon	FALSE	canonical	3	419	junction_1	25.4460212999989	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCAAGGTCTGGAGAACT	7148	False	NA	33	True	NA	NA	NA	1401751	1397775	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1399027_1399127_1399196_1399523_1399588_1399792_1399939_1401295
H1_mix_00044597	chr19	-	916	1	FSM	ENSG00000267317.2	ENST00000591252.2	911	1	0	-5	0	5	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCAGTAGCATGATCTCAG	NA	False	NA	1	True	AATAAA	-40	NA	1458580	1457664	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1457700_1458600
H1_mix_00044598	chr19	-	853	3	FSM	ENSG00000119559.17	ENST00000588427.5	853	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	173.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGACACACTGCACCAGG	-4	True	NA	NA	False	NA	NA	NA	1479201	1461142	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1461825_1478773_1478906_1479162
H1_mix_00044599	chr19	-	2406	2	FSM	ENSG00000119559.17	ENST00000436106.3	2403	2	0	-3	0	3	multi-exon	FALSE	canonical	3	428	junction_1	0	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGGTGTCGTCCTTACGCC	431	False	NA	0	True	ATTAAA	-21	NA	1479118	1473197	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1475259_1478773
H1_mix_00044600	chr19	-	2246	3	FSM	ENSG00000119559.17	ENST00000585675.6	2243	3	0	-3	0	3	multi-exon	FALSE	canonical	3	358	junction_2	35	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGGTGTCGTCCTTACGCC	-18	True	NA	0	True	ATTAAA	-21	NA	1479215	1473197	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1475259_1478773_1478906_1479162
H1_mix_00044601	chr19	-	1306	3	FSM	ENSG00000119559.17	ENST00000592872.5	1287	3	0	-19	0	0	multi-exon	FALSE	canonical	3	79	junction_2	174.5	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTGAGCGGCTCCGTC	14	True	NA	7	True	CATAAA	-33	NA	1479183	1474154	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1475259_1478773_1478906_1479113
H1_mix_00044603	chr19	-	357	3	FSM	ENSG00000119559.17	ENST00000592605.1	357	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	171	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTTAGCTGGGCATAGT	-22	True	NA	NA	False	AATGAA	-33	NA	1479219	1478412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1478581_1478773_1478906_1479162
H1_mix_00044604	chr19	-	2816	14	NIC	ENSG00000115257.15	novel	2661	15	NA	NA	0	0	intron_retention	FALSE	canonical	2	19	junction_4	4.74684572939739	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTCTGTGGCCTCCTCT	7642	False	NA	-5	True	AATAAA	-17	NA	1490377	1481427	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_1482208_1482352_1482476_1482895_1483021_1483283_1483768_1483837_1483942_1484026_1484128_1486852_1487066_1487140_1487314_1487602_1487692_1487784_1487862_1487963_1488093_1488187_1488281_1489792_1489898_1490157
H1_mix_00044605	chr19	-	2661	15	FSM	ENSG00000115257.15	ENST00000300954.9	2661	15	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	6.14327241121272	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTCTGTGGCCTCCTCT	3	True	NA	-5	True	AATAAA	-17	NA	1490408	1481427	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1482208_1482352_1482476_1482895_1483021_1483283_1483464_1483649_1483768_1483837_1483942_1484026_1484128_1486852_1487066_1487140_1487314_1487602_1487692_1487784_1487862_1487963_1488093_1488187_1488281_1489792_1489898_1490157
H1_mix_00044606	chr19	-	2534	15	NIC	ENSG00000115257.15	novel	2661	15	NA	NA	-3	-8	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	6.55121113588463	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGTGCTCAGTCTGTGG	1	True	NA	-13	True	AATAAA	-9	NA	1490338	1481435	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_1482208_1482401_1482476_1482895_1483021_1483283_1483464_1483649_1483768_1483837_1483942_1484026_1484128_1486852_1487066_1487140_1487314_1487602_1487692_1487784_1487862_1487963_1488093_1488187_1488281_1489792_1489898_1490157
H1_mix_00044607	chr19	-	481	2	FSM	ENSG00000185761.11	ENST00000590682.2	484	2	3	0	3	0	multi-exon	FALSE	canonical	3	19	junction_1	0	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACCGACTACTCCACTAT	6165	False	NA	NA	False	NA	NA	NA	1507419	1506625	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1506929_1507241
H1_mix_00044608	chr19	-	2532	8	NNC	ENSG00000071655.18	novel	5678	7	NA	NA	0	42992	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	279.608618593628	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCCCAGGCGTGGTGGCTG	5	True	NA	NA	False	NA	NA	NA	1592865	1530603	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_1530638_1576679_1578159_1578334_1578539_1581091_1581270_1582621_1582713_1584539_1584678_1585054_1585215_1592617
H1_mix_00044609	chr19	-	3118	2	FSM	ENSG00000181588.17	ENST00000402693.5	3114	2	0	-4	0	4	multi-exon	FALSE	canonical	3	10	junction_1	0	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCTTCAGCGTGGTGTGG	2	True	NA	0	True	AATAAA	-24	NA	1568325	1554667	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1556924_1567463
H1_mix_00044610	chr19	-	2986	3	FSM	ENSG00000181588.17	ENST00000605173.2	2132	3	-852	-2	-57	2	multi-exon	FALSE	non_canonical	2	10	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGGCTTCAGCGTGGTGT	NA	False	NA	-2	True	AATAAA	-22	NA	1568382	1554669	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1555390_1555576_1556924_1567463
H1_mix_00044611	chr19	-	5679	7	FSM	ENSG00000071655.18	ENST00000434436.8	5678	7	0	-1	0	1	multi-exon	FALSE	canonical	3	102	junction_6	255.475156435133	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGCCTGCCTTCCTTCT	5	True	NA	-1	True	AATAAA	-18	NA	1592865	1573594	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1578159_1578334_1578539_1581091_1581270_1582621_1582713_1584539_1584678_1585054_1585215_1592521
H1_mix_00044612	chr19	-	5604	7	FSM	ENSG00000071655.18	ENST00000156825.5	5518	7	-85	-1	-21	1	multi-exon	FALSE	canonical	3	463	junction_6	122.3856609248	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGCCTGCCTTCCTTCT	-16	True	NA	-1	True	AATAAA	-18	NA	1592886	1573594	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1578159_1578334_1578539_1581091_1581270_1582621_1582713_1584539_1584678_1585054_1585215_1592617
H1_mix_00044613	chr19	-	2782	5	FSM	ENSG00000071655.18	ENST00000590550.6	2782	5	0	0	0	0	multi-exon	FALSE	canonical	3	732	junction_4	25.6941141119907	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTGAGCTTCTGTCTTTG	7340	False	NA	-8	True	NA	NA	NA	1585530	1576639	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1578539_1581091_1581270_1582621_1582713_1584539_1584678_1585054
H1_mix_00044614	chr19	-	1035	5	FSM	ENSG00000071655.18	ENST00000590830.5	1035	5	0	0	0	0	multi-exon	FALSE	canonical	3	786	junction_2	12.4699639133399	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTTCCCGGGGCCTCGGGG	7916	False	NA	NA	False	NA	NA	NA	1584954	1578011	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1578159_1578334_1578539_1581091_1581270_1582621_1582713_1584539
H1_mix_00044616	chr19	-	907	5	FSM	ENSG00000071655.18	ENST00000592361.2	907	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	325.001057690587	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGCACCATGCCCATCACG	6508	False	NA	NA	False	NA	NA	NA	1586362	1581209	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1581270_1582621_1582713_1584539_1584678_1585054_1585215_1585904
H1_mix_00044617	chr19	-	3275	3	FSM	ENSG00000127540.12	ENST00000591899.8	1299	3	19	-1995	0	1995	multi-exon	FALSE	canonical	3	4673	junction_1	32.5	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACGCCTATAATCCCAGG	7	True	NA	NA	False	TTTAAA	-25	NA	1605443	1595173	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1598216_1599411_1599561_1605359
H1_mix_00044618	chr19	-	533	4	FSM	ENSG00000127540.12	ENST00000593029.1	533	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	2195.09974463323	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGTGCCCGGATGTTGAT	7	True	NA	-24	True	ATTAAA	-16	NA	1605443	1598048	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1598216_1599411_1599561_1602293_1602427_1605359
H1_mix_00044620	chr19	-	1751	5	FSM	ENSG00000071564.17	ENST00000592628.5	1751	5	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_1	510.040684651725	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGCAGTCCCCGGGTT	3011	False	NA	-10	True	AATAAA	-19	NA	1619135	1609292	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1610501_1611703_1611850_1615284_1615521_1615685_1615822_1619110
H1_mix_00044621	chr19	-	2694	5	FSM	ENSG00000071564.17	ENST00000593064.5	2694	5	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_1	423.629186317468	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGCAGTCCCCGGGTT	2937	False	NA	-10	True	AATAAA	-19	NA	1619209	1609292	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1611370_1611703_1611850_1615284_1615521_1615685_1615822_1619110
H1_mix_00044622	chr19	-	4417	18	ISM	ENSG00000071564.17	ENST00000262965.12	4735	19	2328	2	0	-1	3prime_fragment	FALSE	canonical	3	1049	junction_14	115.993377689505	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCCTGCAGTCCCCGGGT	3973	False	NA	-11	True	AATAAA	-18	NA	1650287	1609293	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_1611850_1615284_1615521_1615685_1615822_1619110_1619235_1619315_1619475_1619779_1619854_1620967_1621047_1621132_1621192_1621837_1621971_1622053_1622224_1622312_1622416_1623950_1624001_1625575_1625709_1627358_1627427_1632037_1632117_1632331_1632406_1646354_1646428_1650176
H1_mix_00044623	chr19	-	4285	17	FSM	ENSG00000071564.17	ENST00000344749.9	4289	17	0	4	0	-1	multi-exon	FALSE	canonical	3	85	junction_2	454.02102357022	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCCTGCAGTCCCCGGGT	1931	False	NA	-11	True	AATAAA	-18	NA	1652329	1609293	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1611850_1612206_1612434_1615685_1615822_1619110_1619235_1619315_1619475_1619779_1619854_1620967_1621047_1621132_1621192_1621837_1621971_1622053_1622224_1622312_1622416_1623950_1624001_1625575_1625709_1627358_1627427_1646354_1646428_1650176_1650288_1652299
H1_mix_00044624	chr19	-	4734	19	FSM	ENSG00000071564.17	ENST00000262965.12	4735	19	0	1	0	0	multi-exon	TRUE	canonical	3	904	junction_18	138.374246515619	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGCAGTCCCCGGGTT	-16	True	NA	-10	True	AATAAA	-19	NA	1652615	1609292	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1611850_1615284_1615521_1615685_1615822_1619110_1619235_1619315_1619475_1619779_1619854_1620967_1621047_1621132_1621192_1621837_1621971_1622053_1622224_1622312_1622416_1623950_1624001_1625575_1625709_1627358_1627427_1632037_1632117_1632331_1632406_1646354_1646428_1650176_1650288_1652299
H1_mix_00044625	chr19	-	4391	20	FSM	ENSG00000071564.17	ENST00000588136.7	4392	20	0	1	0	0	multi-exon	FALSE	canonical	3	85	junction_3	394.672001692124	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGCAGTCCCCGGGTT	-16	True	NA	-10	True	AATAAA	-19	NA	1652615	1609292	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1611370_1611703_1611850_1612206_1612434_1615685_1615822_1619110_1619235_1619315_1619475_1619779_1619854_1620967_1621047_1621132_1621192_1621837_1621971_1622053_1622224_1622312_1622416_1623950_1624001_1625575_1625709_1627358_1627427_1632037_1632117_1632331_1632406_1646354_1646428_1650176_1650288_1652299
H1_mix_00044626	chr19	-	2590	20	NIC	ENSG00000071564.17	novel	4735	19	NA	NA	14	-2	combination_of_known_junctions	FALSE	canonical	3	195	junction_1	268.436851960204	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCCTGCAGTCCCCGGG	22	True	NA	-12	True	AATAAA	-17	NA	1652577	1609294	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_1609600_1611703_1611850_1615284_1615521_1615685_1615822_1619110_1619235_1619315_1619475_1619779_1619854_1620967_1621047_1621132_1621192_1621837_1621971_1622053_1622224_1622312_1622416_1623950_1624001_1625575_1625709_1627358_1627427_1632037_1632117_1632331_1632406_1646354_1646428_1650176_1650288_1652299
H1_mix_00044627	chr19	-	3503	20	NIC	ENSG00000071564.17	novel	4735	19	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	192	junction_1	269.016532460074	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCCTGCAGTCCCCGGGT	11	True	NA	-11	True	AATAAA	-18	NA	1652588	1609293	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_1610501_1611703_1611850_1615284_1615521_1615685_1615822_1619110_1619235_1619315_1619475_1619779_1619854_1620967_1621047_1621132_1621192_1621837_1621971_1622053_1622224_1622312_1622416_1623950_1624001_1625575_1625709_1627358_1627427_1632037_1632117_1632331_1632406_1646354_1646428_1650176_1650288_1652299
H1_mix_00044628	chr19	-	4366	20	NIC	ENSG00000071564.17	novel	4392	20	NA	NA	8	-2	combination_of_known_junctions	FALSE	canonical	3	395	junction_1	230.895294709774	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCCTGCAGTCCCCGGG	16	True	NA	-12	True	AATAAA	-17	NA	1652583	1609294	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_1611370_1611703_1611850_1615284_1615521_1615685_1615822_1619110_1619235_1619315_1619475_1619779_1619854_1620967_1621047_1621132_1621192_1621837_1621971_1622053_1622224_1622312_1622416_1623950_1624001_1625575_1625709_1627358_1627427_1632037_1632117_1632331_1632406_1646354_1646428_1650176_1650288_1652299
H1_mix_00044629	chr19	-	4699	19	NIC	ENSG00000071564.17	novel	4735	19	NA	NA	6	-2	intron_retention	FALSE	canonical	3	266	junction_5	261.631679661445	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCCTGCAGTCCCCGGG	14	True	NA	-12	True	AATAAA	-17	NA	1652585	1609294	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_1611850_1615284_1615521_1615685_1615822_1619110_1619235_1619315_1619472_1619779_1619854_1620967_1621047_1621132_1621192_1621837_1621971_1622053_1622224_1622312_1622416_1623950_1624001_1625575_1625709_1627358_1627427_1632037_1632117_1632331_1632406_1646354_1646428_1650176_1650288_1652299
H1_mix_00044630	chr19	-	3511	20	NIC	ENSG00000071564.17	novel	4735	19	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	3	192	junction_1	337.155495661642	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCCTGCAGTCCCCGGG	-1	True	NA	-12	True	AATAAA	-17	NA	1652600	1609294	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_1610501_1611703_1611850_1615284_1615521_1615685_1615822_1619110_1619235_1619315_1619472_1619779_1619854_1620967_1621047_1621132_1621192_1621837_1621971_1622053_1622224_1622312_1622416_1623950_1624001_1625575_1625709_1627358_1627427_1632037_1632117_1632331_1632406_1646354_1646428_1650176_1650288_1652299
H1_mix_00044632	chr19	-	1663	7	ISM	ENSG00000071564.17	ENST00000453954.6	3585	20	31563	1672	18	0	internal_fragment	FALSE	canonical	3	44	junction_2	588.381017897605	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCGTGTAAACCTGAGCCC	1118	False	NA	-15	True	ATTAAA	-17	NA	1621028	1610964	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_1611850_1612206_1612431_1615685_1615822_1619110_1619235_1619315_1619475_1619779_1619854_1620967
H1_mix_00044633	chr19	-	2661	20	NIC	ENSG00000071564.17	novel	4392	20	NA	NA	40	0	combination_of_known_junctions	FALSE	canonical	3	266	junction_6	309.348085863072	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCGTGTAAACCTGAGCCC	1709	False	NA	-15	True	ATTAAA	-17	NA	1652551	1610964	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_1611370_1611703_1611850_1615284_1615521_1615685_1615822_1619110_1619235_1619315_1619472_1619779_1619854_1620967_1621047_1621132_1621192_1621837_1621971_1622053_1622224_1622312_1622416_1623950_1624001_1625575_1625709_1627358_1627427_1632037_1632117_1632331_1632406_1646354_1646428_1650176_1650288_1652299
H1_mix_00044635	chr19	-	1988	6	FSM	ENSG00000130270.16	ENST00000533107.3	2187	6	202	-3	202	0	multi-exon	FALSE	canonical	2	6	junction_2	2.49799919935936	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTTTTGTTTTTTT	6305	False	NA	-5	True	AATAAA	-16	NA	1805958	1798760	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1800156_1800258_1800450_1801955_1802045_1802486_1802646_1805373_1805457_1805887
H1_mix_00044636	chr19	-	921	2	FSM	ENSG00000079313.15	ENST00000587404.1	279	2	149	-791	149	0	multi-exon	FALSE	canonical	3	192	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTGTGGTGGTCTTGGT	5816	False	NA	-5	True	AATAAA	-18	NA	1816238	1815247	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1816155_1816224
H1_mix_00044637	chr19	-	4611	16	FSM	ENSG00000079313.15	ENST00000170168.9	4609	16	0	-2	0	2	multi-exon	FALSE	canonical	3	92	junction_14	24.3261176516106	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGGTGGTCTTGGTCT	-13	True	NA	-3	True	AATAAA	-20	NA	1848483	1815245	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1816155_1816224_1816346_1816430_1816570_1816697_1816814_1817218_1817330_1817706_1817781_1818481_1818596_1818705_1818844_1819017_1819132_1819933_1820058_1820263_1820396_1821518_1821683_1823571_1823786_1825838_1825944_1826877_1828632_1848201
H1_mix_00044638	chr19	-	2905	2	FSM	ENSG00000129911.9	ENST00000250916.6	2901	2	0	-4	0	4	multi-exon	FALSE	canonical	3	192	junction_1	0	255	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGTGTGTGTGGTCTCTCC	-1	True	NA	3	True	ATTAAA	-26	NA	1863579	1852394	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1854761_1863040
H1_mix_00044639	chr19	-	1328	1	FSM	ENSG00000261526.2	ENST00000565797.2	1299	1	-35	6	-35	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATCTTCTTGGCTCAT	9315	False	NA	-5	True	TATAAA	-27	NA	1876204	1874876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1874900_1876200
H1_mix_00044640	chr19	-	1706	5	FSM	ENSG00000129968.17	ENST00000292577.12	1706	5	0	0	0	0	multi-exon	FALSE	canonical	3	540	junction_4	57.6817778852213	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGAGCCCTTAGGGAGCT	0	True	NA	NA	False	NA	NA	NA	1885496	1876809	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1877426_1877507_1877688_1879920_1880116_1881234_1881805_1885351
H1_mix_00044641	chr19	-	5592	3	FSM	ENSG00000129968.17	ENST00000588598.5	5425	3	0	-167	0	0	multi-exon	FALSE	canonical	3	648	junction_1	25.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGAGCCCTTAGGGAGCT	1917	False	NA	NA	False	NA	NA	NA	1883602	1876809	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1877426_1877507_1880116_1881234
H1_mix_00044642	chr19	-	2763	3	FSM	ENSG00000133243.10	ENST00000592895.5	2763	3	0	0	0	0	multi-exon	FALSE	canonical	3	511	junction_1	37.5	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCTTTGCTCCCCTTCA	8844	False	NA	-5	True	AATAAA	-28	NA	1988569	1985437	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1986650_1986829_1986977_1987165
H1_mix_00044643	chr19	-	2639	9	FSM	ENSG00000133243.10	ENST00000255608.9	2629	9	0	-10	0	0	multi-exon	TRUE	canonical	3	450	junction_6	39.9968748779201	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCTTTGCTCCCCTTCA	10	True	NA	-5	True	AATAAA	-28	NA	2015714	1985437	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1986650_1986829_1986977_1987165_1987254_1987499_1987693_1990003_1990202_1990716_1990823_1993019_1993177_1997343_1997464_2015296
H1_mix_00044644	chr19	-	1885	6	FSM	ENSG00000133243.10	ENST00000589685.2	2422	6	-129	666	-129	-656	multi-exon	FALSE	canonical	3	511	junction_1	24.5878018537648	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCCATTTCTCTGCTAG	5984	False	NA	NA	False	NA	NA	NA	1991429	1986103	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1986650_1986829_1986977_1987165_1987254_1987499_1987693_1990003_1990202_1990716
H1_mix_00044645	chr19	-	2318	10	NNC	ENSG00000133243.10	novel	2629	9	NA	NA	-366	-656	at_least_one_novel_splicesite	TRUE	non_canonical	3	32	junction_9	160.832402607171	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCCATTTCTCTGCTAG	NA	False	NA	NA	False	NA	NA	NA	2016080	1986103	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_1986650_1986829_1986977_1987165_1987254_1987499_1987693_1990003_1990202_1990716_1990823_1993019_1993177_1997343_1997464_2015296_2015542_2015562
H1_mix_00044646	chr19	-	1799	1	FSM	ENSG00000133243.10	ENST00000611545.1	951	1	2	-850	2	850	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTAACATTGTTTATTG	7045	False	NA	NA	False	NA	NA	NA	1990368	1988569	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1988600_1990400
H1_mix_00044649	chr19	-	357	1	FSM	ENSG00000279653.1	ENST00000623695.1	1002	1	713	-68	713	68	mono-exon	FALSE	NA	NA	NA	NA	NA	773	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCCACGTCAGATGCCT	NA	False	NA	NA	False	NA	NA	NA	2002868	2002511	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2002500_2002900
H1_mix_00044650	chr19	-	3819	15	NNC	ENSG00000099875.16	novel	3785	14	NA	NA	0	17845	intron_retention	FALSE	non_canonical	0	0	junction_1	329.86673252162	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCACTGACAAAGGACAAAAA	0	True	NA	NA	False	NA	NA	NA	2051244	2019619	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_2019654_2037470_2039857_2040133_2040178_2041039_2041205_2041839_2042035_2042426_2042523_2042606_2042663_2042765_2042871_2043123_2043198_2043502_2043583_2046185_2046284_2046366_2046469_2046603_2046692_2050800_2050948_2051095
H1_mix_00044651	chr19	-	870	4	FSM	ENSG00000099875.16	ENST00000591142.5	875	4	0	5	0	1	multi-exon	FALSE	canonical	3	404	junction_1	434.505338159255	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGCCTGAGTTTTAGTTT	9104	False	NA	-17	True	AATAAA	-17	NA	2042140	2037469	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2037830_2040133_2040178_2041039_2041205_2041839
H1_mix_00044652	chr19	-	1744	14	FSM	ENSG00000099875.16	ENST00000309340.11	1744	14	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_1	245.222227435448	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGTTTTAGTTTTCTGT	20	False	NA	-12	True	AATAAA	-22	NA	2051224	2037464	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2037830_2040133_2040178_2041039_2041205_2041839_2042035_2042426_2042523_2042606_2042663_2042765_2042871_2043123_2043198_2043502_2043583_2046185_2046284_2046366_2046469_2046603_2046692_2050800_2050948_2051095
H1_mix_00044653	chr19	-	3683	13	NIC	ENSG00000099875.16	novel	3785	14	NA	NA	2	0	intron_retention	FALSE	canonical	3	57	junction_11	332.474675309597	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCCTGAGTTTTAGTT	14	False	NA	-18	True	AATAAA	-16	NA	2051230	2037470	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_2039857_2040133_2040178_2041039_2041205_2041839_2042035_2042426_2042523_2042606_2042663_2042765_2042871_2043123_2043198_2043502_2043583_2046185_2046284_2046366_2046469_2050800_2050948_2051095
H1_mix_00044654	chr19	-	3785	14	FSM	ENSG00000099875.16	ENST00000250896.9	3785	14	0	0	0	0	multi-exon	FALSE	canonical	3	880	junction_11	144.17798008305	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCCTGAGTTTTAGTT	0	True	NA	-18	True	AATAAA	-16	NA	2051244	2037470	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2039857_2040133_2040178_2041039_2041205_2041839_2042035_2042426_2042523_2042606_2042663_2042765_2042871_2043123_2043198_2043502_2043583_2046185_2046284_2046366_2046469_2046603_2046692_2050800_2050948_2051095
H1_mix_00044658	chr19	-	3391	5	FSM	ENSG00000172081.14	ENST00000357066.8	3387	5	0	-4	0	4	multi-exon	FALSE	canonical	3	59	junction_4	11.3880419739304	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCGTTTTCCTGCCAG	-25	True	NA	-26	True	AATAAA	-27	NA	2096326	2071031	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2073425_2076810_2077014_2078139_2078680_2085174_2085329_2096225
H1_mix_00044659	chr19	-	3493	5	NIC	ENSG00000172081.14	novel	3387	5	NA	NA	90	4	combination_of_known_junctions	FALSE	canonical	3	8	junction_4	31.3169283295792	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCGTTTTCCTGCCAG	NA	False	NA	-26	True	AATAAA	-27	NA	2096583	2071031	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_2073425_2076810_2077014_2078139_2078680_2085174_2085329_2096380
H1_mix_00044660	chr19	-	3365	6	FSM	ENSG00000065000.19	ENST00000589223.5	3357	6	0	-8	0	7	multi-exon	FALSE	canonical	3	381	junction_3	33.8856901951251	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGCCTGGCCTGGGTCA	7292	False	NA	-1	True	AATAAA	-29	NA	2112406	2100980	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2102269_2108686_2108767_2109085_2109208_2109872_2109959_2110135_2110225_2110706
H1_mix_00044661	chr19	-	5028	32	NIC	ENSG00000065000.19	novel	5065	32	NA	NA	-1	7	combination_of_known_junctions	FALSE	canonical	3	197	junction_9	58.9906428319557	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGCCTGGCCTGGGTCA	-3	True	NA	-1	True	AATAAA	-29	NA	2151558	2100980	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_2102269_2108686_2108767_2109085_2109208_2109872_2109959_2110135_2110225_2110706_2110897_2111284_2111333_2111678_2111829_2112859_2112932_2113335_2113414_2114124_2114303_2114747_2114822_2115218_2115419_2115537_2115614_2116206_2116279_2116604_2116747_2117221_2117368_2118600_2118833_2120861_2121093_2121162_2121312_2121733_2121880_2123357_2123407_2123829_2123880_2127151_2127202_2129089_2129164_2129317_2129458_2130407_2130538_2132470_2132579_2137010_2137092_2137726_2137808_2138618_2138715_2151238
H1_mix_00044662	chr19	-	5072	32	FSM	ENSG00000065000.19	ENST00000643116.3	5065	32	0	-7	0	7	multi-exon	FALSE	canonical	3	93	junction_9	68.80847054794	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGCCTGGCCTGGGTCA	-11	True	NA	-1	True	AATAAA	-29	NA	2151566	2100980	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2102269_2108686_2108767_2109085_2109208_2109872_2109959_2110135_2110225_2110706_2110897_2111284_2111333_2111678_2111829_2112859_2112968_2113335_2113414_2114124_2114303_2114747_2114822_2115218_2115419_2115537_2115614_2116206_2116279_2116604_2116747_2117221_2117368_2118600_2118833_2120861_2121093_2121162_2121312_2121733_2121880_2123357_2123407_2123829_2123880_2127151_2127202_2129089_2129164_2129317_2129458_2130407_2130538_2132470_2132579_2137010_2137092_2137726_2137808_2138618_2138715_2151238
H1_mix_00044663	chr19	-	618	6	FSM	ENSG00000065000.19	ENST00000589369.2	618	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	173.545844087377	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGACTCCACGCTACTGA	8893	False	NA	NA	False	NA	NA	NA	2110805	2102236	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2102269_2108686_2108877_2109085_2109208_2109872_2109959_2110135_2110225_2110706
H1_mix_00044664	chr19	-	627	2	FSM	ENSG00000065000.19	ENST00000586177.1	627	2	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_1	0	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCTCCTGTCCGGTGCAG	1072	False	NA	NA	False	NA	NA	NA	2118626	2116766	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2117368_2118600
H1_mix_00044665	chr19	-	937	6	FSM	ENSG00000104886.12	ENST00000587394.6	937	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	701.732313635335	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTATATTTCTCAATAA	-5	True	NA	NA	False	NA	NA	NA	2236272	2230083	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2230613_2233997_2234062_2234149_2234241_2235761_2235829_2235922_2235991_2236154
H1_mix_00044666	chr19	-	1311	5	FSM	ENSG00000104886.12	ENST00000587962.6	1311	5	0	0	0	0	multi-exon	FALSE	canonical	3	1595	junction_4	98.3221745080935	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCGGTGAAGTGAAGGAG	-12	True	NA	-1	True	AATAAA	-22	NA	2236326	2233148	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2234062_2234149_2234241_2235761_2235829_2235922_2235991_2236154
H1_mix_00044667	chr19	-	1219	6	FSM	ENSG00000104886.12	ENST00000326631.7	1218	6	0	-1	0	1	multi-exon	FALSE	canonical	3	1595	junction_5	95.1012092457294	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATGGCGGTGAAGTGAAG	-15	True	NA	-4	True	AATAAA	-19	NA	2236329	2233151	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2233906_2233997_2234062_2234149_2234241_2235761_2235829_2235922_2235991_2236154
H1_mix_00044668	chr19	-	4659	1	FSM	ENSG00000220008.3	ENST00000585527.1	2241	1	202	-2620	202	2620	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGATTTTGTTCTTACT	NA	False	NA	NA	False	AATAAA	-24	NA	2291822	2287163	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2287200_2291800
H1_mix_00044669	chr19	-	4762	2	Genic_Genomic	ENSG00000220008.3	novel	2241	1	NA	NA	-16154	2620	multi-exon	FALSE	canonical	1	1	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGATTTTGTTCTTACT	NA	False	NA	NA	False	AATAAA	-24	NA	2308178	2287163	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr19_-_2291823_2308075
H1_mix_00044670	chr19	-	513	5	NNC	ENSG00000130332.15	novel	491	4	NA	NA	0	16809	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1634.92039179282	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGACATGGCCAAGGCTG	2	True	NA	NA	False	NA	NA	NA	2328586	2304710	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_2304737_2321524_2321823_2324124_2324197_2328386_2328478_2328560
H1_mix_00044671	chr19	-	527	5	NNC	ENSG00000130332.15	novel	491	4	NA	NA	0	12198	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1634.92039179282	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACTTTCCATGAGCAC	2	True	NA	NA	False	AAAAAG	-15	NA	2328586	2309321	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_2309359_2321521_2321823_2324124_2324197_2328386_2328478_2328560
H1_mix_00044672	chr19	-	523	5	NNC	ENSG00000130332.15	novel	491	4	NA	NA	0	12198	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1661.42070229066	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACTTTCCATGAGCAC	2	True	NA	NA	False	AAAAAG	-15	NA	2328586	2309321	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_2309359_2321521_2321823_2324124_2324193_2328386_2328478_2328560
H1_mix_00044673	chr19	-	513	5	NNC	ENSG00000130332.15	novel	491	4	NA	NA	0	9590	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1634.92039179282	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAATCTGACCCAGGCTCA	2	True	NA	NA	False	NA	NA	NA	2328586	2311929	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_2311953_2321521_2321823_2324124_2324197_2328386_2328478_2328560
H1_mix_00044674	chr19	-	727	2	FSM	ENSG00000130332.15	ENST00000591515.6	710	2	0	-17	0	16	multi-exon	FALSE	canonical	3	4166	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCTTTTCCCTTGACCT	7909	False	NA	2	True	AATAAA	-32	NA	2324532	2321503	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2321823_2324124
H1_mix_00044675	chr19	-	556	3	FSM	ENSG00000130332.15	ENST00000589532.5	539	3	0	-17	0	16	multi-exon	FALSE	canonical	2	49	junction_2	2058.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCTTTTCCCTTGACCT	7535	False	NA	2	True	AATAAA	-32	NA	2324906	2321503	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2321823_2324124_2324197_2324741
H1_mix_00044676	chr19	-	508	4	FSM	ENSG00000130332.15	ENST00000252622.15	491	4	0	-17	0	16	multi-exon	FALSE	canonical	3	2774	junction_3	591.355692925633	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCTTTTCCCTTGACCT	2	True	NA	2	True	AATAAA	-32	NA	2328586	2321503	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2321823_2324124_2324197_2328386_2328478_2328560
H1_mix_00044677	chr19	-	591	3	FSM	ENSG00000130332.15	ENST00000587502.2	575	3	0	-16	0	16	multi-exon	FALSE	canonical	3	3817	junction_2	174.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCTTTTCCCTTGACCT	2	True	NA	2	True	AATAAA	-32	NA	2328586	2321503	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2321823_2324124_2324197_2328386
H1_mix_00044678	chr19	-	527	4	FSM	ENSG00000130332.15	ENST00000585409.2	512	4	2	-17	2	16	multi-exon	FALSE	canonical	3	662	junction_2	1440.53323460446	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCTTTTCCCTTGACCT	3832	False	NA	2	True	AATAAA	-32	NA	2328609	2321503	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2321823_2324124_2324193_2328386_2328478_2328560
H1_mix_00044679	chr19	-	543	2	FSM	ENSG00000130332.15	ENST00000591745.1	543	2	0	0	0	0	multi-exon	FALSE	canonical	3	2774	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCCGTTTCCTCATTTG	1	True	NA	NA	False	NA	NA	NA	2328587	2327961	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2328478_2328560
H1_mix_00044680	chr19	-	1665	3	FSM	ENSG00000099800.8	ENST00000215570.8	1664	3	0	-1	0	1	multi-exon	FALSE	canonical	3	4197	junction_1	86	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGCTTGATCCGCTGGA	-19	True	NA	0	True	AATAAA	-39	NA	2427586	2425623	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2427047_2427255_2427325_2427413
H1_mix_00044681	chr19	-	4634	12	FSM	ENSG00000176619.13	ENST00000325327.4	4634	12	0	0	0	0	multi-exon	FALSE	canonical	3	1129	junction_8	78.4568102485703	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTGCCTCTGAGTTTAT	-5	True	NA	-6	True	AATAAA	-14	NA	2456959	2428165	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2430953_2431547_2431659_2431782_2431903_2432415_2432524_2433825_2434106_2434294_2434516_2434787_2434914_2435000_2435172_2438162_2438289_2438374_2438532_2444403_2444541_2456669
H1_mix_00044683	chr19	-	4193	5	FSM	ENSG00000176533.13	ENST00000382159.8	4193	5	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	16.3324829710611	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCTCTGGGCTGTTC	-2	True	NA	-8	True	AATAAA	-20	NA	2702694	2511218	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2515148_2520607_2520726_2555148_2555189_2646223_2646281_2702645
H1_mix_00044684	chr19	-	3381	2	FSM	ENSG00000176490.5	ENST00000323469.5	3378	2	0	-3	0	3	multi-exon	FALSE	canonical	3	57	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCGCCCTGTCTCTGTGGT	-11	True	NA	1	True	AATAAA	-29	NA	2721372	2714563	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2717876_2721303
H1_mix_00044685	chr19	-	326	1	FSM	ENSG00000261342.1	ENST00000567905.1	1585	1	1033	226	1033	-226	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGCAAGCTGGAGAATTAA	NA	False	NA	NA	False	NA	NA	NA	2728294	2727968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2728000_2728300
H1_mix_00044686	chr19	-	1367	3	FSM	ENSG00000141873.11	ENST00000269740.9	1367	3	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_1	11	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGGCCATGTCAACC	-6	True	NA	-4	True	TTTAAA	-32	NA	2740017	2732523	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2733486_2737047_2737380_2739944
H1_mix_00044687	chr19	-	2992	2	FSM	ENSG00000141873.11	ENST00000455372.2	2940	2	-53	1	-53	-1	multi-exon	FALSE	canonical	3	313	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGTGTCCACACGGGC	NA	False	NA	-38	True	AATAAA	-17	NA	2740081	2734524	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2737380_2739944
H1_mix_00044689	chr19	-	2232	12	FSM	ENSG00000104969.11	ENST00000221566.7	2231	12	0	-1	0	1	multi-exon	FALSE	canonical	3	649	junction_11	75.3281526290961	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTCTTCGTGTTGACCT	7	True	NA	-3	True	AATAAA	-18	NA	2783273	2754713	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2755934_2757336_2757458_2757692_2757783_2759256_2759295_2761459_2761523_2762505_2762645_2763652_2763758_2765185_2765286_2767135_2767221_2767579_2767687_2768968_2769092_2783232
H1_mix_00044690	chr19	-	2863	12	FSM	ENSG00000104969.11	ENST00000676943.1	2854	12	0	-9	0	1	multi-exon	FALSE	canonical	3	56	junction_11	223.513306868087	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTCTTCGTGTTGACCT	128	False	NA	-3	True	AATAAA	-18	NA	2783241	2754713	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2755934_2757336_2757458_2757692_2757783_2759256_2759295_2761459_2761523_2762505_2762645_2763652_2763758_2765185_2765286_2767135_2767221_2767579_2767687_2768968_2769092_2782569
H1_mix_00044691	chr19	-	2325	12	FSM	ENSG00000104969.11	ENST00000678109.1	2316	12	0	-9	0	1	multi-exon	FALSE	canonical	3	20	junction_10	233.105126498754	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTCTTCGTGTTGACCT	7	False	NA	-3	True	AATAAA	-18	NA	2783362	2754713	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2755934_2757336_2757458_2757692_2757783_2759256_2759295_2761459_2761523_2762505_2762645_2763652_2763758_2765185_2765286_2767135_2767221_2767579_2767687_2768964_2769092_2783232
H1_mix_00044692	chr19	-	2009	4	FSM	ENSG00000175691.9	ENST00000314531.5	2040	4	33	-2	33	2	multi-exon	FALSE	canonical	3	26	junction_2	4.96655480858378	189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATATTTTGTAATTTA	8	True	NA	-1	True	AATAAA	-25	NA	2944938	2933215	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2934816_2936523_2936705_2939280_2939408_2944837
H1_mix_00044693	chr19	-	3069	20	NNC	ENSG00000065717.15	novel	2812	20	NA	NA	0	53946	intron_retention	FALSE	non_canonical	0	0	junction_1	49.1237907169676	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGGCTAGAGAAGGAGAG	19	True	NA	NA	False	AAAACA	-30	NA	3029280	2943692	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_2943715_2997643_2997956_3000646_3000724_3002352_3002504_3005436_3005585_3005720_3005969_3006419_3006670_3008868_3008946_3009541_3009703_3011021_3011161_3013668_3013819_3014569_3014615_3015652_3015761_3017839_3017860_3019282_3019774_3025019_3025083_3027828_3027874_3028318_3028383_3028705_3028804_3028880
H1_mix_00044694	chr19	-	1513	11	NIC	ENSG00000065717.15	novel	2812	20	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	75.6627385177143	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGCACTTCTCTCTCGGGC	9993	False	NA	-25	True	AATAAA	-15	NA	3025630	2997643	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_2997956_3000646_3000724_3002352_3002504_3005436_3005585_3005720_3005969_3006419_3006670_3008868_3008946_3009541_3009578_3019698_3019774_3025019_3025083_3025554
H1_mix_00044695	chr19	-	2337	17	NIC	ENSG00000065717.15	novel	2812	20	NA	NA	-66	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_12	56.3986923607277	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGCACTTCTCTCTCGGGC	7201	False	NA	-25	True	AATAAA	-15	NA	3028422	2997643	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_2997956_3000646_3000724_3002352_3002504_3005436_3005585_3005720_3005969_3006419_3006670_3008868_3008946_3009541_3009703_3011021_3011161_3013668_3013819_3014569_3014615_3015652_3015761_3019282_3019467_3019698_3019774_3025019_3025083_3027828_3027874_3028318
H1_mix_00044696	chr19	-	2775	19	NIC	ENSG00000065717.15	novel	2812	20	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_12	55.5870188683173	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGCACTTCTCTCTCGGGC	6360	False	NA	-25	True	AATAAA	-15	NA	3029263	2997643	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_2997956_3000646_3000724_3002352_3002504_3005436_3005585_3005720_3005969_3006419_3006670_3008868_3008946_3009541_3009703_3011021_3011161_3013668_3013819_3014569_3014615_3015652_3015761_3019282_3019464_3019698_3019774_3025019_3025083_3027828_3027874_3028318_3028383_3028705_3028804_3028880
H1_mix_00044697	chr19	-	2643	18	NNC	ENSG00000065717.15	novel	2812	20	NA	NA	36	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_11	61.5240128100332	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGCACTTCTCTCTCGGGC	-23	True	NA	-25	True	AATAAA	-15	NA	3029244	2997643	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_2997956_3002352_3002504_3005436_3005585_3005720_3005969_3006419_3006670_3008868_3008946_3009577_3009703_3011021_3011161_3013668_3013819_3014569_3014615_3015652_3015761_3019282_3019464_3019698_3019774_3025019_3025083_3027828_3027874_3028318_3028383_3028705_3028804_3028880
H1_mix_00044698	chr19	-	2812	20	FSM	ENSG00000065717.15	ENST00000262953.11	2812	20	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_14	43.2379872994381	1025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGCACTTCTCTCTCGGGC	19	True	NA	-25	True	AATAAA	-15	NA	3029280	2997643	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2997956_3000646_3000724_3002352_3002504_3005436_3005585_3005720_3005969_3006419_3006670_3008868_3008946_3009541_3009703_3011021_3011161_3013668_3013819_3014569_3014615_3015652_3015761_3017839_3017860_3019282_3019464_3019698_3019774_3025019_3025083_3027828_3027874_3028318_3028383_3028705_3028804_3028880
H1_mix_00044699	chr19	-	771	6	FSM	ENSG00000065717.15	ENST00000587672.5	771	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	67.0343195684121	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGTGGTGTACGGACG	9819	False	NA	NA	False	NA	NA	NA	3019480	3009571	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3009703_3011021_3011161_3013668_3013819_3014569_3014615_3015652_3015761_3019282
H1_mix_00044703	chr19	-	3274	2	FSM	ENSG00000104964.15	ENST00000592414.1	3274	2	0	0	0	0	multi-exon	FALSE	canonical	3	2744	junction_1	0	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTGTGTCCCTGCCTCT	6338	False	NA	-10	True	AATAAA	-16	NA	3056768	3052909	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3055727_3056311
H1_mix_00044704	chr19	-	1800	7	FSM	ENSG00000104964.15	ENST00000327141.9	1798	7	0	-2	0	2	multi-exon	FALSE	canonical	3	2362	junction_2	226.945478033822	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTGTCCCTGCCTCTGT	26	True	NA	-8	True	AATAAA	-18	NA	3062495	3052907	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3054041_3054119_3054195_3055663_3055727_3056311_3056357_3057678_3057743_3061159_3061258_3062173
H1_mix_00044705	chr19	-	1875	7	FSM	ENSG00000104964.15	ENST00000221561.12	1884	7	9	0	9	0	multi-exon	FALSE	canonical	3	61	junction_6	990.7935652238	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTGTGTCCCTGCCTCT	5126	False	NA	-10	True	AATAAA	-16	NA	3063098	3052909	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3054041_3054119_3054195_3055663_3055727_3056311_3056357_3057678_3057743_3061159_3061258_3062699
H1_mix_00044706	chr19	-	1437	3	FSM	ENSG00000104964.15	ENST00000590067.5	1100	3	0	-337	0	0	multi-exon	FALSE	canonical	3	2362	junction_2	30.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCGACCCAGGATTCCCC	6910	False	NA	-82	True	NA	NA	NA	3056196	3053211	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3054041_3054119_3054195_3055663
H1_mix_00044707	chr19	-	1321	6	FSM	ENSG00000104964.15	ENST00000586839.1	942	6	0	-379	0	0	multi-exon	FALSE	canonical	3	2362	junction_2	229.621079171752	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCGACCCAGGATTCCCC	6	True	NA	-82	True	NA	NA	NA	3061404	3053211	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3054041_3054119_3054195_3055663_3055727_3056311_3056357_3057678_3057743_3061159
H1_mix_00044709	chr19	-	1302	4	FSM	ENSG00000095932.7	ENST00000215531.6	1312	4	0	10	0	-10	multi-exon	FALSE	canonical	3	5	junction_3	2.35702260395516	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTTGAGATGGAGTCT	-2	True	NA	NA	False	NA	NA	NA	3480525	3473995	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3474997_3478418_3478479_3478817_3478930_3480396
H1_mix_00044710	chr19	-	820	3	FSM	ENSG00000095932.7	ENST00000587847.1	820	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATGTCTACTGAACAGAA	4508	False	NA	-120	True	NA	NA	NA	3479088	3474507	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3474997_3478418_3478479_3478817
H1_mix_00044711	chr19	-	303	2	FSM	ENSG00000095932.7	ENST00000586804.1	303	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGGGTGCCCGCCCCCAC	1	True	NA	NA	False	NA	NA	NA	3480522	3478819	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3478997_3480396
H1_mix_00044712	chr19	-	1763	5	FSM	ENSG00000129932.10	ENST00000427575.6	1763	5	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_4	26.4232378788066	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGACTCCTCTGAGTGT	7	True	NA	-8	True	ATTAAA	-14	NA	3500674	3490823	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3491812_3492261_3492500_3494027_3494105_3496540_3496887_3500560
H1_mix_00044713	chr19	-	982	5	FSM	ENSG00000161091.14	ENST00000615073.4	986	5	0	4	0	-4	multi-exon	FALSE	canonical	3	51	junction_1	60.7638873015873	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACATCCAGAAACCTCCT	9912	False	NA	NA	False	AATAAA	-31	NA	3547364	3538264	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3538757_3544808_3544940_3546073_3546169_3546254_3546426_3547271
H1_mix_00044714	chr19	-	2085	10	NIC	ENSG00000161091.14	novel	777	7	NA	NA	-11	-2	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	43.8425916148461	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATCCAGAAACCTCCTGC	8	True	NA	NA	False	AATAAA	-33	NA	3557574	3538262	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_3538757_3544808_3544940_3546073_3546169_3546254_3546426_3547271_3547365_3547454_3547548_3547847_3548031_3548122_3548268_3550983_3551195_3557105
H1_mix_00044715	chr19	-	3685	11	NIC	ENSG00000161091.14	novel	2137	10	NA	NA	-30	-12	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	51.5256246929622	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGCCGCCACCGTGCTGGA	-3	True	NA	NA	False	NA	NA	NA	3557616	3538661	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_3538757_3542775_3544733_3544808_3544940_3546073_3546169_3546254_3546426_3547271_3547365_3547454_3547548_3547847_3548031_3548122_3548268_3550983_3551195_3557105
H1_mix_00044716	chr19	-	2137	10	FSM	ENSG00000161091.14	ENST00000355415.7	2137	10	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	31.4128227336985	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCTCCTGTCTGCCTG	-4	True	NA	-3	True	AATAAA	-13	NA	3557586	3544198	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3544733_3544808_3544940_3546073_3546169_3546254_3546426_3547271_3547365_3547454_3547548_3547847_3548031_3548122_3548268_3550983_3551195_3557105
H1_mix_00044717	chr19	-	2528	3	FSM	ENSG00000006638.13	ENST00000375190.10	2642	3	59	55	59	-10	multi-exon	FALSE	canonical	2	5	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGCAATCAAACCACCTTT	58	False	NA	NA	False	NA	NA	NA	3606816	3594561	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3595934_3599848_3600718_3606529
H1_mix_00044718	chr19	-	3590	10	FSM	ENSG00000105298.14	ENST00000429344.7	3583	10	0	-7	0	7	multi-exon	FALSE	canonical	3	96	junction_7	12.1177351915628	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGCAGAAATGCAGAGAGT	-4	True	NA	-7	True	AATAAA	-26	NA	3626790	3610637	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3612414_3613057_3613366_3613463_3613587_3614396_3614590_3618874_3618990_3619079_3619243_3620126_3620273_3620706_3620803_3623687_3624163_3626595
H1_mix_00044719	chr19	-	2680	11	FSM	ENSG00000105298.14	ENST00000248420.9	2671	11	0	-9	0	4	multi-exon	FALSE	canonical	0	0	junction_1	39.1587793476763	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTTTGCAGAAATGCAGAG	-29	True	NA	-10	True	AATAAA	-23	NA	3626815	3610640	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3610972_3611903_3612414_3613057_3613366_3613463_3613587_3614396_3614590_3618874_3618990_3619079_3619243_3620126_3620273_3620706_3620803_3623687_3624163_3626595
H1_mix_00044720	chr19	-	5075	18	FSM	ENSG00000186111.11	ENST00000335312.8	5069	18	0	-6	0	6	multi-exon	FALSE	canonical	3	64	junction_2	38.3271295315927	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGCCTTTCTGTGGGTT	7	True	NA	38	True	AATAAA	-21	NA	3700468	3630176	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3633170_3633436_3633521_3638883_3639017_3641704_3641810_3642906_3642940_3643242_3643382_3644086_3644252_3645973_3646059_3647337_3647387_3648624_3648709_3651825_3652032_3653289_3653590_3656404_3656558_3660965_3661084_3661870_3662002_3664821_3664915_3667321_3667354_3700296
H1_mix_00044721	chr19	-	5229	19	FSM	ENSG00000186111.11	ENST00000679828.1	5223	19	0	-6	0	6	multi-exon	FALSE	canonical	0	0	junction_15	67.1383314921927	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGCCTTTCTGTGGGTT	7	True	NA	38	True	AATAAA	-21	NA	3700468	3630176	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3633170_3633436_3633521_3638883_3639017_3641704_3641810_3642906_3642940_3643242_3643382_3644086_3644252_3645973_3646059_3647337_3647387_3648624_3648709_3651825_3652032_3653289_3653590_3656404_3656558_3660965_3661084_3661372_3661527_3661870_3662002_3664821_3664915_3667321_3667354_3700296
H1_mix_00044723	chr19	-	2176	11	FSM	ENSG00000011132.12	ENST00000316757.4	2176	11	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_8	27.3278246481494	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAAGGTTGTGGGTTCTGT	-2	True	NA	91	True	ATTAAA	-16	NA	3761692	3750771	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3751098_3751188_3751330_3751433_3751554_3752507_3752721_3752819_3752991_3753764_3753927_3754018_3754106_3754194_3754341_3759560_3759601_3759688_3760302_3761535
H1_mix_00044724	chr19	-	1779	8	FSM	ENSG00000011132.12	ENST00000588984.5	1779	8	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_5	23.9863906992176	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGGTGCTGTGAAAATACT	6890	False	NA	44	True	NA	NA	NA	3754800	3750818	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3751098_3751188_3751330_3751433_3751554_3752507_3752721_3752819_3752991_3753764_3753927_3754018_3754106_3754194
H1_mix_00044725	chr19	-	725	2	FSM	ENSG00000011132.12	ENST00000589934.1	725	2	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTTCCAGAGCCCCGAG	120	False	NA	NA	False	NA	NA	NA	3761570	3759611	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3760302_3761535
H1_mix_00044726	chr19	-	2102	14	FSM	ENSG00000007264.15	ENST00000310132.11	2098	14	0	-4	0	1	multi-exon	TRUE	canonical	3	125	junction_12	24.4414528083871	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCGCCTGTGTGTCTCTGTG	8	True	NA	-2	True	GATAAA	-21	NA	3786381	3777968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3778423_3778508_3778596_3778991_3779188_3779377_3779452_3779532_3779618_3779697_3779798_3781606_3781673_3783125_3783220_3783813_3784034_3784123_3784240_3784337_3784452_3784824_3784885_3785063_3785287_3786168
H1_mix_00044727	chr19	-	1907	13	FSM	ENSG00000007264.15	ENST00000395040.6	1907	13	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_12	42.4233786438039	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTAGGCGCCTGTGTGTCTC	-24	True	NA	-6	True	GATAAA	-17	NA	3786413	3777972	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3778423_3778508_3778596_3778991_3779188_3779377_3779452_3779532_3779618_3779697_3779798_3781606_3781673_3783125_3783220_3783813_3784034_3784123_3784240_3784337_3784452_3784824_3784885_3786168
H1_mix_00044728	chr19	-	2054	14	NNC	ENSG00000007264.15	novel	2098	14	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_4	49.1412647916743	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTAGGCGCCTGTGTGTC	41	False	NA	-8	True	GATAAA	-15	NA	3786348	3777974	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_3778423_3778508_3778596_3778991_3779188_3779377_3779452_3779541_3779618_3779697_3779798_3781606_3781673_3783125_3783220_3783813_3784034_3784123_3784240_3784337_3784452_3784824_3784885_3785063_3785287_3786168
H1_mix_00044729	chr19	-	391	3	FSM	ENSG00000105278.12	ENST00000592807.5	514	3	0	123	0	56	multi-exon	FALSE	canonical	1	4	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCCATCTGCAGGGTCG	-1	True	NA	NA	False	NA	NA	NA	3869029	3833663	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3833779_3834772_3834984_3868964
H1_mix_00044730	chr19	-	1033	3	FSM	ENSG00000105278.12	ENST00000586578.1	1019	3	-14	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	37.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAATTTCATGTAATTTT	-1	True	NA	-1	True	AATAAA	-25	NA	3869029	3851804	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3852615_3855401_3855560_3868964
H1_mix_00044731	chr19	-	1168	3	NIC	ENSG00000105278.12	novel	1019	3	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_2	27	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAATTTCATGTAATTTT	1	True	NA	-1	True	AATAAA	-25	NA	3869027	3851804	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_3852615_3855401_3855697_3868964
H1_mix_00044732	chr19	-	878	2	FSM	ENSG00000105278.12	ENST00000439086.2	870	2	0	-8	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAATTTCATGTAATTTT	-4	True	NA	-1	True	AATAAA	-25	NA	3869032	3851804	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3852615_3868964
H1_mix_00044733	chr19	-	2998	3	FSM	ENSG00000167657.14	ENST00000595279.1	2058	3	-934	-6	-934	1	multi-exon	FALSE	canonical	3	211	junction_2	2	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGGTGTTGTGTGCCTCAG	8317	False	NA	-1	True	AATAAA	-19	NA	3962774	3958451	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3959638_3960058_3960105_3961008
H1_mix_00044735	chr19	-	2179	9	NIC	ENSG00000167657.14	novel	2286	9	NA	NA	9	3	combination_of_known_junctions	FALSE	canonical	3	202	junction_6	12.8816730279883	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTTGTGTGCCTCAGGC	1	True	NA	1	True	AATAAA	-21	NA	3971090	3958449	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_3959638_3960058_3960105_3961008_3961162_3963642_3963670_3963870_3963920_3964243_3964374_3964630_3964992_3969673_3969830_3971021
H1_mix_00044736	chr19	-	2289	9	FSM	ENSG00000167657.14	ENST00000545797.7	2286	9	0	-3	0	3	multi-exon	FALSE	canonical	3	13	junction_8	69.3789413294841	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTTGTGTGCCTCAGGC	-8	True	NA	1	True	AATAAA	-21	NA	3971099	3958449	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3959638_3960058_3960105_3961008_3961162_3963642_3963670_3963870_3963920_3964243_3964374_3964630_3964992_3969673_3969830_3970920
H1_mix_00044739	chr19	-	3185	16	NNC	ENSG00000167658.16	novel	3158	15	NA	NA	0	3743	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2016.61764568519	3091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGCAAGGTGGCTCATGC	-1	True	NA	NA	False	AAAAAG	-2	NA	3985463	3972312	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_3972340_3976055_3976748_3977214_3977348_3977427_3977611_3977818_3978173_3979328_3979437_3979807_3980067_3980513_3980710_3980840_3980980_3981338_3981453_3981946_3982053_3982245_3982425_3982806_3983019_3983109_3983292_3984135_3984351_3985377
H1_mix_00044740	chr19	-	3158	15	FSM	ENSG00000167658.16	ENST00000309311.7	3158	15	0	0	0	0	multi-exon	FALSE	canonical	3	6813	junction_14	678.896001322916	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTTCTGCATTTTTCAC	-1	True	NA	-14	True	AATAAA	-17	NA	3985463	3976055	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3976748_3977214_3977348_3977427_3977611_3977818_3978173_3979328_3979437_3979807_3980067_3980513_3980710_3980840_3980980_3981338_3981453_3981946_3982053_3982245_3982425_3982806_3983019_3983109_3983292_3984135_3984351_3985377
H1_mix_00044741	chr19	-	6644	3	FSM	ENSG00000178951.9	ENST00000601588.1	2083	3	-123	-4438	-123	-1	multi-exon	FALSE	canonical	3	23	junction_2	7	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGCCGCCTCAGTCGCCT	25	True	NA	NA	False	CATAAA	-38	NA	4065855	4043303	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4048245_4053970_4055248_4065429
H1_mix_00044742	chr19	-	6390	3	FSM	ENSG00000178951.9	ENST00000322357.9	6437	3	46	1	46	-1	multi-exon	FALSE	canonical	1	3	junction_2	17	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGCCGCCTCAGTCGCCT	-7	True	NA	NA	False	CATAAA	-38	NA	4066853	4043303	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4048245_4053970_4055248_4066681
H1_mix_00044743	chr19	-	2929	4	FSM	ENSG00000126934.15	ENST00000600584.5	2926	4	0	-3	0	0	multi-exon	FALSE	canonical	3	1146	junction_3	70.5328922481482	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCGCCATCCTGCTTCTTT	2525	False	NA	-8	True	AAAAAG	-5	NA	4100679	4090320	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4090709_4094452_4095450_4097278_4097344_4099200
H1_mix_00044744	chr19	-	1727	11	FSM	ENSG00000126934.15	ENST00000262948.10	1727	11	0	0	0	0	multi-exon	FALSE	canonical	3	1033	junction_9	95.4792647646598	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCGCCATCCTGCTTCTTT	-16	True	NA	-8	True	AAAAAG	-5	NA	4124122	4090320	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4090709_4094452_4094499_4095387_4095450_4097278_4097344_4099200_4099415_4101018_4101144_4101228_4101281_4102375_4102454_4110508_4110656_4117418_4117630_4123783
H1_mix_00044745	chr19	-	1600	8	FSM	ENSG00000077463.15	ENST00000337491.7	1600	8	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	12.4310342387469	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTGTGTTTACTTTAT	-5	True	NA	-4	True	AATAAA	-19	NA	4182563	4174108	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4174947_4175027_4175152_4175679_4175761_4175841_4175938_4177078_4177139_4179103_4179287_4180781_4180910_4182473
H1_mix_00044746	chr19	-	1474	7	FSM	ENSG00000077463.15	ENST00000600938.5	1473	7	0	-1	0	0	multi-exon	FALSE	canonical	3	6	junction_6	24.6537128148187	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTGTGTTTACTTTAT	-7	True	NA	-4	True	AATAAA	-19	NA	4182565	4174108	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4174947_4175027_4175152_4175679_4175761_4175841_4175938_4177078_4177139_4179103_4179287_4182473
H1_mix_00044747	chr19	-	843	7	FSM	ENSG00000077463.15	ENST00000597896.5	827	7	0	-16	0	0	multi-exon	FALSE	canonical	3	10	junction_5	24.6080384337223	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCAGGGTGCTTGGGGAG	58	False	NA	NA	False	NA	NA	NA	4182500	4174619	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4174947_4175027_4175152_4175679_4175761_4175841_4175938_4177078_4177139_4180781_4180910_4182473
H1_mix_00044749	chr19	-	1508	13	FSM	ENSG00000178078.12	ENST00000600324.5	1508	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	33.4550901292398	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATGTGTCTGGCTTGGCT	-10	True	NA	-3	True	ATTAAA	-16	NA	4338821	4324042	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4324198_4324454_4324668_4325215_4325309_4325395_4325546_4326941_4327008_4327123_4327227_4327315_4327386_4328674_4328810_4329960_4330062_4332021_4332079_4333693_4333817_4333972_4334045_4338651
H1_mix_00044750	chr19	-	1376	13	FSM	ENSG00000178078.12	ENST00000594605.6	1376	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	30.1767938802135	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATGTGTCTGGCTTGGCT	-16	True	NA	-3	True	ATTAAA	-16	NA	4338827	4324042	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4324198_4324454_4324530_4325215_4325309_4325395_4325546_4326941_4327008_4327123_4327227_4327315_4327386_4328674_4328810_4329960_4330062_4332021_4332079_4333693_4333817_4333972_4334045_4338651
H1_mix_00044752	chr19	-	2516	10	FSM	ENSG00000141985.9	ENST00000269886.7	2516	10	0	0	0	0	multi-exon	FALSE	canonical	3	688	junction_6	56.2869631639709	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCTTGCCTCGTCTTGGT	-43	True	NA	-8	True	ATTAAA	-15	NA	4400547	4360369	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4361797_4362328_4362386_4362611_4362737_4363369_4363474_4363719_4363879_4364087_4364222_4365481_4365626_4366500_4366574_4366925_4366995_4400323
H1_mix_00044753	chr19	-	1915	11	FSM	ENSG00000167671.12	ENST00000301281.11	1915	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_10	7.9724525711979	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTGGTTCTCCGTTGA	-4	True	NA	NA	False	AATAAA	-18	NA	4457794	4445005	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4445624_4446048_4446198_4446282_4446414_4446499_4446720_4446835_4446921_4447549_4447626_4448317_4448416_4452363_4452493_4453457_4453523_4453929_4454094_4457614
H1_mix_00044754	chr19	-	1363	2	FSM	ENSG00000167671.12	ENST00000593024.1	629	2	-734	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGCGTGCCTTCTGGCCC	8271	False	NA	NA	False	NA	NA	NA	4449604	4447549	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4447626_4448317
H1_mix_00044755	chr19	-	508	3	FSM	ENSG00000214456.8	ENST00000589728.1	508	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	0.5	1210	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTGCCAGCGGCCGCGCT	9374	False	NA	NA	False	NA	NA	NA	4525849	4523908	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4524086_4524962_4525077_4525632
H1_mix_00044756	chr19	-	4034	17	FSM	ENSG00000167680.17	ENST00000676793.1	4021	17	0	-13	0	13	multi-exon	FALSE	canonical	3	109	junction_7	116.960580298449	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCTCTGCTCTGCCTC	-1	True	NA	1	True	AATAAA	-30	NA	4581776	4542579	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4544530_4546215_4546275_4546391_4546470_4548026_4548174_4548262_4548446_4550122_4550273_4550798_4550931_4552421_4552640_4554387_4554477_4554975_4555096_4555473_4555565_4555987_4556090_4556950_4557014_4557162_4557224_4558025_4558150_4558336_4558490_4581462
H1_mix_00044757	chr19	-	1017	7	NNC	ENSG00000074842.8	novel	990	6	NA	NA	0	12846	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	332.782085855995	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCAGGCATGGTGGTGC	9	True	NA	NA	False	AATACA	-26	NA	4670342	4628527	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_4628554_4657543_4658085_4659930_4660004_4660668_4660751_4664875_4664938_4668594_4668646_4670160
H1_mix_00044758	chr19	-	990	6	FSM	ENSG00000074842.8	ENST00000262947.8	990	6	0	0	0	0	multi-exon	FALSE	canonical	3	649	junction_5	114.448940580505	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCACAGCCTGGGCCCTCC	9	True	NA	-47	True	AATAAA	-20	NA	4670342	4657544	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4658085_4659930_4660004_4660668_4660751_4664875_4664938_4668594_4668646_4670160
H1_mix_00044759	chr19	-	4292	23	NIC	ENSG00000142002.18	novel	3098	23	NA	NA	0	1	combination_of_known_junctions	TRUE	canonical	3	7	junction_21	34.1343965054809	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGCCTGAGGTTCCTTC	50	True	NA	-6	True	ATTAAA	-22	NA	4723750	4675225	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_4676657_4679834_4679947_4682695_4682839_4683476_4683630_4684662_4684810_4685625_4685772_4688756_4688893_4689569_4689723_4690877_4690958_4694660_4694824_4695377_4695556_4697550_4697652_4700215_4700278_4702026_4702156_4702602_4702717_4703885_4704055_4704130_4704305_4705857_4705971_4714080_4714338_4719850_4719942_4722194_4722305_4722498_4722552_4723673
H1_mix_00044760	chr19	-	4364	23	NIC	ENSG00000142002.18	novel	3098	23	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	16	junction_4	31.6624761617631	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGCCTGAGGTTCCTTC	3	True	NA	-6	True	ATTAAA	-22	NA	4723797	4675225	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_4676657_4679834_4679947_4682695_4682839_4683189_4683325_4683476_4683630_4684662_4684810_4685625_4685772_4688756_4688893_4689569_4689723_4690877_4690958_4694660_4694824_4695377_4695556_4697550_4697652_4700215_4700278_4702026_4702156_4702602_4702717_4703885_4704055_4704130_4704305_4705857_4705971_4714080_4714338_4719850_4719942_4722498_4722552_4723673
H1_mix_00044761	chr19	-	4273	22	FSM	ENSG00000142002.18	ENST00000262960.14	4273	22	5	-5	-2	2	multi-exon	FALSE	canonical	3	83	junction_5	16.4755023252934	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGAGGTTCCTTCTAAG	-37	True	NA	-2	True	ATTAAA	-26	NA	4723837	4675221	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4676657_4679834_4679947_4682695_4682839_4683476_4683630_4684662_4684810_4685625_4685772_4688756_4688893_4689569_4689723_4690877_4690958_4694660_4694824_4695377_4695556_4697550_4697652_4700215_4700278_4702026_4702156_4702602_4702717_4703885_4704055_4704130_4704305_4705857_4705971_4714080_4714338_4719850_4719942_4722498_4722552_4723673
H1_mix_00044765	chr19	-	2038	13	FSM	ENSG00000142002.18	ENST00000597849.5	2025	13	0	-13	0	13	multi-exon	FALSE	canonical	3	108	junction_3	12.0715459748212	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCGCTTTTGTGCTGCAG	50	True	NA	8	True	NA	NA	NA	4723750	4694303	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4694824_4695377_4695556_4697550_4697652_4700215_4700278_4702026_4702156_4702602_4702717_4703885_4704055_4704130_4704305_4705857_4705971_4714080_4714338_4719850_4719942_4722498_4722552_4723673
H1_mix_00044768	chr19	-	2703	2	FSM	ENSG00000127666.11	ENST00000248244.6	2684	2	1	-20	1	20	multi-exon	FALSE	canonical	3	7	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGACACCTTCTGCCTGGC	8	True	NA	-4	True	AATAAA	-36	NA	4831711	4815911	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4818517_4831613
H1_mix_00044769	chr19	-	2243	8	FSM	ENSG00000105355.9	ENST00000221957.9	2232	8	0	-11	0	11	multi-exon	FALSE	canonical	3	746	junction_3	61.238909866462	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTACGTGTGTGTGTCTT	-3	True	NA	-6	True	AATAAA	-29	NA	4867667	4838329	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4839537_4844667_4844794_4847690_4847891_4852015_4852302_4859589_4859673_4859825_4860025_4861328_4861412_4867608
H1_mix_00044770	chr19	-	1701	5	FSM	ENSG00000105355.9	ENST00000589163.5	1699	5	0	-2	0	0	multi-exon	FALSE	canonical	2	6	junction_2	354.127801789128	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTTAATAAACTTCACCCA	8044	False	NA	-45	True	NA	NA	NA	4859636	4838368	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4839537_4844667_4844794_4847816_4847891_4852015_4852302_4859589
H1_mix_00044771	chr19	-	2236	8	FSM	ENSG00000105355.9	ENST00000585479.5	1535	8	-10	-691	-10	0	multi-exon	FALSE	canonical	3	30	junction_1	278.185813690734	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCCTTAATAAACTTCACC	NA	False	NA	-47	True	NA	NA	NA	4867704	4838370	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4839534_4844667_4844794_4847690_4847891_4852015_4852302_4859589_4859673_4859825_4860025_4861328_4861412_4867608
H1_mix_00044772	chr19	-	7409	33	NIC	ENSG00000105426.18	novel	7356	38	NA	NA	-22	145	combination_of_known_junctions	TRUE	canonical	2	73	junction_14	38.3648194965127	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCCAAGACCACACACCGC	27	False	5340861	NA	False	NA	NA	NA	5340834	5205362	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_5206843_5207921_5208058_5208236_5208392_5210468_5210595_5210678_5210806_5211589_5211769_5211964_5212251_5212336_5212492_5214360_5214481_5214560_5214737_5215288_5215413_5215497_5215596_5218419_5218533_5218786_5218799_5219309_5219468_5219938_5220155_5220259_5220354_5220999_5221254_5222122_5222221_5222688_5223298_5225726_5225845_5229490_5229685_5231309_5231616_5238918_5239064_5240198_5240333_5243900_5244483_5245775_5246046_5258016_5258128_5265007_5265197_5273441_5273584_5274198_5274345_5286049_5286235_5340663
H1_mix_00044773	chr19	-	7445	33	NIC	ENSG00000105426.18	novel	7356	38	NA	NA	-22	145	combination_of_known_splicesites	FALSE	canonical	3	40	junction_13	48.9666659575675	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCCAAGACCACACACCGC	27	False	5340861	NA	False	NA	NA	NA	5340834	5205362	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_5206843_5207921_5208058_5208236_5208392_5210468_5210595_5210678_5210806_5211589_5211769_5211964_5212251_5212336_5212492_5214360_5214481_5214560_5214737_5215288_5215413_5215497_5215596_5216719_5216768_5218419_5218533_5219309_5219468_5219938_5220155_5220259_5220354_5220999_5221254_5222122_5222221_5222688_5223298_5225726_5225845_5229490_5229685_5231309_5231616_5238918_5239064_5240198_5240333_5243900_5244483_5245775_5246046_5258016_5258128_5265007_5265197_5273441_5273584_5274198_5274345_5286049_5286235_5340663
H1_mix_00044774	chr19	-	5575	18	NIC	ENSG00000105426.18	novel	4766	28	NA	NA	-3823	6	intron_retention	FALSE	canonical	3	48	junction_13	44.5902529420887	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATTGTGGAGTCTTTGTT	7920	False	NA	-4	True	ATTAAA	-21	NA	5223839	5205501	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_5206843_5207921_5208058_5208236_5208392_5210468_5210595_5210678_5210806_5211589_5211769_5211964_5212251_5212336_5212492_5214360_5214481_5214560_5214737_5215288_5215413_5215497_5215596_5218419_5218533_5219309_5219468_5219938_5220155_5220259_5220354_5220999_5221254_5222122
H1_mix_00044778	chr19	-	837	5	NIC	ENSG00000105426.18	novel	893	4	NA	NA	16	2	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	83.4356039110403	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTCTCTGTCTCTTGG	15	True	NA	NA	False	GGGGCT	-18	NA	5293236	5273058	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_5273327_5273441_5273584_5274198_5274345_5286049_5286235_5293140
H1_mix_00044780	chr19	-	279	1	FSM	ENSG00000233270.1	ENST00000435815.1	279	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGATCAATGAAGTGAGA	8	True	NA	NA	False	NA	NA	NA	5576938	5576659	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5576700_5576900
H1_mix_00044781	chr19	-	3173	21	FSM	ENSG00000130254.12	ENST00000252542.9	3167	21	0	-6	0	6	multi-exon	FALSE	canonical	3	171	junction_14	38.4765837880652	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGCGCGTGCACATGCGTG	9	True	NA	-13	True	AATAAA	-21	NA	5622776	5586992	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5587400_5587700_5587768_5587867_5587981_5590277_5590409_5591747_5591794_5592746_5592888_5593890_5594179_5595360_5595498_5598792_5598885_5600129_5600261_5604582_5604696_5604786_5604937_5609994_5610096_5610638_5610689_5611119_5611631_5612539_5612568_5613464_5613528_5616131_5616336_5616421_5616487_5621308_5621397_5622529
H1_mix_00044785	chr19	-	655	4	FSM	ENSG00000174917.9	ENST00000587950.5	655	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	233.807613220785	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGACCCGTGTGCTGG	-9	True	NA	-7	True	AATAAA	-15	NA	5680252	5678421	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5678649_5679344_5679397_5679585_5679764_5680054
H1_mix_00044786	chr19	-	516	4	FSM	ENSG00000174917.9	ENST00000309324.9	516	4	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_3	28.9865869364129	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGACCCGTGTGCTGG	-5	True	NA	-7	True	AATAAA	-15	NA	5680516	5678421	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5678649_5679344_5679397_5679585_5679764_5680457
H1_mix_00044787	chr19	-	769	4	FSM	ENSG00000174917.9	ENST00000590389.5	769	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	242.778820236765	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCGAAGGTTGCAGTGAGC	6	True	NA	NA	False	NA	NA	NA	5680194	5678831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5679231_5679344_5679397_5679585_5679764_5680054
H1_mix_00044789	chr19	-	3092	18	FSM	ENSG00000196365.12	ENST00000360614.8	3092	18	0	0	0	0	multi-exon	TRUE	canonical	3	598	junction_16	81.2653392494106	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCGGCTTCCTCACCTGCT	-1	True	NA	-6	True	ATTAAA	-14	NA	5720146	5691833	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5692209_5693297_5693463_5693551_5693770_5694386_5694553_5694760_5694902_5696053_5696171_5696248_5696372_5696669_5696758_5699026_5699206_5700788_5700928_5705771_5705993_5707059_5707144_5707696_5707827_5708341_5708404_5711770_5712003_5713133_5713254_5714182_5714272_5719703
H1_mix_00044790	chr19	-	2552	4	FSM	ENSG00000196365.12	ENST00000588589.5	684	4	-1868	0	-942	0	multi-exon	FALSE	canonical	3	677	junction_2	22.6617641757114	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAAGTACAGCAACGAGAA	9987	False	NA	NA	False	NA	NA	NA	5709900	5700884	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5700928_5705771_5705993_5707059_5707144_5707696
H1_mix_00044792	chr19	-	2107	14	NNC	ENSG00000141994.16	novel	2038	13	NA	NA	0	53271	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	57.8199613368435	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTAAGTGTCGCTTTTAG	7	True	NA	NA	False	NA	NA	NA	5791210	5731560	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_5731588_5785144_5785276_5785382_5785512_5785602_5785792_5786466_5786543_5786748_5786846_5787060_5787172_5787295_5787362_5787588_5787706_5788023_5788177_5788356_5788399_5789206_5789720_5790046_5790336_5791043
H1_mix_00044794	chr19	-	1854	1	FSM	ENSG00000212123.4	ENST00000390672.2	1640	1	-217	3	-70	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTCCATGTCCACGTGG	6401	False	NA	-3	True	ATTAAA	-15	NA	5784816	5782962	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5783000_5784800
H1_mix_00044795	chr19	-	2038	13	FSM	ENSG00000141994.16	ENST00000309061.12	2038	13	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_5	18.1926419802683	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGCCTTTCTGTGACCC	10	True	NA	-3	True	AATAAA	-17	NA	5791163	5785139	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5785276_5785382_5785512_5785602_5785792_5786466_5786543_5786748_5786846_5787060_5787172_5787295_5787362_5787588_5787706_5788023_5788177_5788356_5788399_5789206_5789720_5790046_5790336_5791043
H1_mix_00044797	chr19	-	209	1	FSM	ENSG00000130383.7	ENST00000252675.6	1916	1	550	1157	550	-1157	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGACGCTGTCCCGGTACA	NA	False	NA	NA	False	NA	NA	NA	5867191	5866982	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5867000_5867200
H1_mix_00044798	chr19	-	2419	4	FSM	ENSG00000174886.14	ENST00000418389.6	2406	4	0	-13	0	13	multi-exon	FALSE	canonical	2	4	junction_1	1367.31911255404	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATAACGCTGGCCTGGGC	-23	True	NA	NA	False	AATAAA	-5	NA	5903786	5891262	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5893291_5896452_5896576_5896904_5896998_5903611
H1_mix_00044799	chr19	-	575	4	FSM	ENSG00000174886.14	ENST00000308961.5	575	4	0	0	0	0	multi-exon	FALSE	canonical	3	2498	junction_1	205.647486950094	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGTGTCCGGAGGGCTT	-27	True	NA	-10	True	AATAAA	-18	NA	5903790	5894674	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5894855_5896452_5896576_5896904_5896998_5903611
H1_mix_00044800	chr19	-	657	5	FSM	ENSG00000174886.14	ENST00000593233.1	657	5	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_4	1264.17621398284	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCAGTGTCCGGAGGGC	9	True	NA	-12	True	AATAAA	-16	NA	5903754	5894676	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5894855_5896452_5896576_5896904_5896998_5901334_5901455_5903611
H1_mix_00044801	chr19	-	2154	3	FSM	ENSG00000174886.14	ENST00000592634.5	2154	3	0	0	0	0	multi-exon	FALSE	canonical	3	2801	junction_1	98.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGTGTCCGGAGGGCTT	-8	True	NA	-10	True	AATAAA	-18	NA	5903771	5894674	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5896576_5896904_5896998_5903611
H1_mix_00044802	chr19	-	3186	17	FSM	ENSG00000031823.14	ENST00000439268.6	3186	17	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_15	183.115358107942	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCCTCTGCATGCCCC	-10	True	NA	NA	False	ATTAAA	-14	NA	5978108	5916138	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5917654_5917793_5917981_5918495_5918639_5921200_5921322_5923193_5923304_5923811_5923915_5924826_5924906_5925633_5925738_5927967_5928088_5931418_5931532_5932451_5932545_5933413_5933480_5941620_5941708_5941798_5941836_5951392_5951597_5957917_5957974_5978060
H1_mix_00044803	chr19	-	2982	16	FSM	ENSG00000031823.14	ENST00000591092.5	1783	16	-15	-1184	0	0	multi-exon	FALSE	canonical	3	245	junction_9	97.6100177008259	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCCTCTGCATGCCCC	-10	True	NA	NA	False	ATTAAA	-14	NA	5978108	5916138	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5917654_5917793_5917981_5918495_5918639_5921200_5921322_5923193_5923304_5923811_5923915_5924826_5924906_5925633_5925738_5927967_5928088_5931418_5931532_5932451_5932545_5933413_5933480_5941620_5941708_5941798_5941836_5957917_5957974_5978060
H1_mix_00044805	chr19	-	3919	18	FSM	ENSG00000087903.13	ENST00000303657.10	3959	18	0	40	0	-40	multi-exon	FALSE	canonical	2	3	junction_12	6.19744338403102	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCACTCCTGGTAACCAAT	1	True	NA	NA	False	NA	NA	NA	6110500	5993203	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5994951_5995600_5995644_5997059_5997214_6001814_6002024_6002720_6002871_6004200_6004299_6007011_6007167_6007689_6007803_6008105_6008225_6010135_6010252_6012985_6013106_6016089_6016272_6026162_6026238_6039979_6040242_6042043_6042124_6044192_6044283_6047406_6047505_6110392
H1_mix_00044806	chr19	-	2647	17	FSM	ENSG00000087903.13	ENST00000592546.5	2578	17	-69	0	0	0	multi-exon	FALSE	canonical	1	5	junction_12	5.5589876551401	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGGCTGTGCTGAGAGCA	-26	True	NA	NA	False	NA	NA	NA	6110601	5994501	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5994951_5995600_5995644_5997059_5997214_6001814_6002024_6002720_6002871_6004200_6004299_6007011_6007167_6007689_6007803_6008105_6008225_6010135_6010252_6012985_6013106_6016089_6016272_6039979_6040242_6042043_6042124_6044192_6044283_6047406_6047505_6110392
H1_mix_00044807	chr19	-	425	3	FSM	ENSG00000087903.13	ENST00000590778.1	492	3	67	0	67	0	multi-exon	FALSE	canonical	3	14	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCGAGGTTCCAAAAGATGC	NA	False	NA	NA	False	NA	NA	NA	5997306	5994815	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5994951_5995600_5995644_5997059
H1_mix_00044808	chr19	-	4534	12	FSM	ENSG00000130382.9	ENST00000252674.9	4532	12	0	-2	0	2	multi-exon	FALSE	canonical	3	45	junction_7	7.39890543613666	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCATGCATCTGCCTGGTTC	-20	True	NA	-4	True	AATAAA	-19	NA	6279975	6210378	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_6213171_6213336_6213409_6213725_6213798_6213938_6214039_6216404_6216514_6217953_6218042_6222120_6222685_6226976_6227103_6230569_6230714_6262227_6262311_6270578_6270760_6279772
H1_mix_00044809	chr19	-	4411	11	NIC	ENSG00000130382.9	novel	4532	12	NA	NA	-3	2	intron_retention	FALSE	canonical	3	13	junction_7	14.3600139275698	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCATGCATCTGCCTGGTTC	-23	True	NA	-4	True	AATAAA	-19	NA	6279978	6210378	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_6213171_6213336_6213409_6213725_6213798_6213938_6214039_6216404_6216514_6217953_6218042_6222120_6222685_6230569_6230714_6262227_6262311_6270578_6270760_6279772
H1_mix_00044810	chr19	-	2432	13	FSM	ENSG00000125651.14	ENST00000394456.10	2432	13	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_8	23.1641185649031	994	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTCAGATTTCTTTGTTT	-13	True	NA	-35	True	AATAAA	-18	NA	6393164	6379571	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_6380486_6380572_6380691_6380903_6381043_6381121_6381196_6381358_6381479_6381553_6381616_6381696_6381851_6383310_6383496_6387388_6387560_6389443_6389638_6391901_6391975_6392856_6392904_6392983
H1_mix_00044811	chr19	-	4178	19	NIC	ENSG00000088247.19	novel	4276	19	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_2	111.387323347269	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTGCTGGCCGCAGTTG	-7	True	NA	NA	False	AATAAA	-22	NA	6424788	6413101	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_6415302_6415379_6415458_6415608_6415735_6415807_6415897_6416297_6416408_6416489_6416651_6416737_6416883_6416986_6417088_6417738_6417842_6417980_6418080_6418482_6418582_6418701_6418877_6419202_6419261_6420072_6420145_6420421_6420472_6421277_6421318_6421649_6421689_6422339_6422437_6424452
H1_mix_00044812	chr19	-	4276	19	FSM	ENSG00000088247.19	ENST00000600480.2	4276	19	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_18	73.163545027477	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTGCTGGCCGCAGTTG	2	True	NA	NA	False	AATAAA	-22	NA	6424811	6413101	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_6415302_6415379_6415458_6415533_6415735_6415807_6415897_6416297_6416408_6416489_6416651_6416737_6416883_6416986_6417088_6417738_6417842_6417980_6418080_6418482_6418582_6418701_6418877_6419202_6419261_6420072_6420145_6420421_6420472_6421277_6421318_6421649_6421689_6422339_6422437_6424452
H1_mix_00044813	chr19	-	2993	20	FSM	ENSG00000088247.19	ENST00000398148.7	2993	20	0	0	0	0	multi-exon	FALSE	canonical	2	137	junction_1	99.684488411773	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGTCTGCGGGTGCTGTCT	9005	False	NA	28	True	AATAAA	-16	NA	6424794	6413347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_6414121_6415140_6415302_6415379_6415458_6415533_6415735_6415807_6415897_6416297_6416408_6416489_6416651_6416737_6416883_6416986_6417088_6417738_6417842_6417980_6418080_6418482_6418582_6418701_6418877_6419202_6419261_6420072_6420145_6420421_6420472_6421277_6421318_6421649_6421689_6422339_6422437_6424452
H1_mix_00044816	chr19	-	271	3	FSM	ENSG00000125648.15	ENST00000601760.1	271	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGAACTCAGCCAATAGC	NA	False	NA	NA	False	NA	NA	NA	6444279	6436420	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_6436465_6438723_6438822_6444150
H1_mix_00044817	chr19	-	3294	9	NIC	ENSG00000125648.15	novel	3482	10	NA	NA	0	2	intron_retention	FALSE	canonical	3	88	junction_2	94.6294582833485	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGTTTTTACTGAAAAG	9	True	NA	-1	True	AATAAA	-18	NA	6459770	6440061	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_6442160_6444150_6444302_6453980_6454089_6454322_6454476_6454558_6454718_6456419_6456532_6457502_6457591_6458197_6458325_6459472
H1_mix_00044818	chr19	-	3484	10	FSM	ENSG00000125648.15	ENST00000301454.9	3482	10	0	-2	0	2	multi-exon	FALSE	canonical	3	283	junction_2	42.9679754419527	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGTTTTTACTGAAAAG	-13	True	NA	-1	True	AATAAA	-18	NA	6459792	6440061	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_6442160_6444150_6444302_6452311_6452480_6453980_6454089_6454322_6454476_6454558_6454718_6456419_6456532_6457502_6457591_6458197_6458325_6459472
H1_mix_00044819	chr19	-	1868	11	NNC	ENSG00000125648.15	novel	3482	10	NA	NA	-40	2	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	105.831942248076	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGTTTTTACTGAAAAG	NA	False	NA	-1	True	AATAAA	-18	NA	6459832	6440061	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_6440323_6441978_6442160_6444150_6444302_6452311_6452480_6453980_6454089_6454322_6454476_6454558_6454718_6456419_6456532_6457502_6457591_6458197_6458325_6459472
H1_mix_00044823	chr19	-	3481	2	NNC	ENSG00000125735.11	novel	4336	4	NA	NA	8487	5083	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	0	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGCGTTTCTCTATAAC	8877	False	NA	1	True	AATAAA	-23	NA	6661630	6656169	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_6659029_6661008
H1_mix_00044825	chr19	-	3628	29	ISM	ENSG00000125730.17	ENST00000245907.11	5231	41	9737	131	44	0	3prime_fragment	TRUE	canonical	3	24	junction_26	6.27383211344989	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTCTGGAGTTCTTTGCC	9766	False	NA	-1	True	GATAAA	-18	NA	6710913	6677834	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_6678024_6678151_6678288_6678371_6678456_6679124_6679209_6679406_6679497_6680157_6680264_6681940_6682031_6682141_6682230_6684387_6684440_6684559_6684651_6684774_6684835_6684987_6685147_6686123_6686288_6686745_6686903_6690628_6690728_6692923_6693084_6693411_6693488_6694430_6694635_6696378_6696466_6696592_6696660_6697343_6697557_6697651_6697795_6702126_6702213_6702470_6702580_6707075_6707274_6707465_6707538_6707799_6707930_6709683_6709843_6710638
H1_mix_00044827	chr19	-	2017	18	FSM	ENSG00000125734.16	ENST00000264080.12	2034	18	-22	39	-22	-39	multi-exon	FALSE	canonical	3	172	junction_17	29.4583161016249	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGTCTTTGTATATTCA	-13	True	NA	98	True	NA	NA	NA	6737602	6729952	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_6730385_6730986_6731112_6731198_6731283_6731472_6731523_6731890_6731935_6732024_6732156_6732262_6732381_6732475_6732550_6732986_6733063_6733167_6733302_6733569_6733675_6733844_6733914_6734004_6734055_6734182_6734308_6735621_6735705_6735907_6735959_6736591_6736712_6737456
H1_mix_00044829	chr19	-	1843	18	NNC	ENSG00000125734.16	novel	2034	18	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	61.8669182272259	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCGTTGTCTTGCCTTTTT	-1	True	NA	-4	True	NA	NA	NA	6737532	6730054	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_6730385_6730988_6731112_6731198_6731283_6731472_6731523_6731890_6731935_6732024_6732156_6732262_6732381_6732475_6732550_6732986_6733063_6733167_6733302_6733569_6733675_6733844_6733914_6734004_6734055_6734182_6734308_6735621_6735705_6735907_6735959_6736591_6736712_6737456
H1_mix_00044830	chr19	-	2027	18	FSM	ENSG00000125734.16	ENST00000430424.8	2009	18	0	-18	0	0	multi-exon	FALSE	canonical	3	72	junction_17	47.2346714485367	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTTTGGCTACGCCGTT	11	True	NA	-17	True	NA	NA	NA	6737260	6730067	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_6730385_6730986_6731112_6731198_6731283_6731472_6731523_6731890_6731935_6732024_6732156_6732262_6732381_6732475_6732550_6732986_6733063_6733167_6733302_6733569_6733675_6733844_6733914_6734004_6734055_6734182_6734308_6735621_6735705_6735907_6735959_6736591_6736712_6736989
H1_mix_00044834	chr19	-	2282	10	FSM	ENSG00000125731.13	ENST00000245908.11	2281	10	0	-1	0	1	multi-exon	FALSE	canonical	3	60	junction_6	19.94993734326	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGGCTGTGTACTTTCTA	9	True	NA	0	True	AATAAA	-23	NA	6767435	6752158	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_6752754_6753455_6753642_6754051_6754164_6754250_6754426_6754615_6754732_6754830_6755316_6759593_6759671_6760637_6760988_6763679_6763817_6767386
H1_mix_00044835	chr19	-	2018	8	FSM	ENSG00000125731.13	ENST00000437152.7	2013	8	0	-5	0	0	multi-exon	TRUE	canonical	2	21	junction_6	32.8099039303435	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAGGCTGTGTACTTTCT	9	True	NA	-1	True	AATAAA	-22	NA	6767435	6752159	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_6752754_6753455_6753642_6754051_6754426_6754615_6754732_6754830_6755316_6759593_6759671_6763679_6763817_6767386
H1_mix_00044836	chr19	-	1950	10	NNC	ENSG00000125731.13	novel	2281	10	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_4	30.3221387564504	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGGCTGTGTACTTTCTA	-19	True	NA	0	True	AATAAA	-23	NA	6767463	6752158	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_6752754_6753455_6753642_6754051_6754164_6754250_6754449_6754615_6754732_6754830_6754933_6759593_6759671_6760637_6760988_6763679_6763817_6767386
H1_mix_00044838	chr19	-	4427	1	ISM	ENSG00000171105.14	ENST00000341500.9	8954	21	177240	10	6467	0	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGAATACGCTTGTTTT	8205	False	NA	-12	True	ATTAAA	-16	NA	7116691	7112264	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_7112300_7116700
H1_mix_00044839	chr19	-	9461	21	FSM	ENSG00000171105.14	ENST00000341500.9	8954	21	-507	0	-24	0	multi-exon	FALSE	canonical	3	22	junction_11	11.2883789801725	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTTGTTTTTGTGTGGTGT	-4	True	NA	-2	True	ATTAAA	-26	NA	7294438	7112254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_7117411_7119448_7119584_7120619_7120750_7122613_7122774_7122878_7122990_7125282_7125528_7126583_7126652_7128851_7128955_7132157_7132318_7141676_7141817_7142815_7143091_7152725_7152928_7163031_7163200_7166153_7166405_7167967_7168095_7170536_7170752_7172289_7172435_7174582_7174732_7184315_7184638_7267344_7267897_7293791
H1_mix_00044840	chr19	-	2712	10	NIC	ENSG00000171105.14	novel	653	4	NA	NA	59	-4	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	17.6446403571547	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATTCTGTGTGATTTCAC	-16	True	NA	NA	False	ATTAAA	-18	NA	7294355	7159426	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_7159646_7163031_7163200_7166153_7166405_7167967_7168095_7170536_7170752_7172289_7172435_7174582_7174732_7184315_7184638_7267344_7267897_7293791
H1_mix_00044841	chr19	-	1083	5	FSM	ENSG00000104883.8	ENST00000221480.6	1078	5	0	-5	0	5	multi-exon	FALSE	canonical	3	24	junction_4	7.07106781186548	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGGGGTGAAGGTTATT	-12	True	NA	-1	True	ATTAAA	-21	NA	7489035	7476869	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_7477437_7478313_7478377_7482032_7482212_7485837_7486027_7488950
H1_mix_00044842	chr19	-	2649	19	FSM	ENSG00000076924.12	ENST00000358368.5	2647	19	0	-2	0	2	multi-exon	FALSE	canonical	3	164	junction_7	14.6181858664026	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGAGCCTCCTTCCTGCT	7	True	NA	0	True	AATACA	-20	NA	7629545	7619522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_7619648_7619746_7619857_7619945_7620076_7620274_7620447_7620546_7620670_7620845_7621037_7621134_7621298_7622330_7622445_7622529_7622662_7622761_7622894_7623169_7623290_7623730_7623883_7624300_7624446_7625879_7626045_7626135_7626271_7627242_7627441_7627727_7627852_7628149_7628299_7629476
H1_mix_00044843	chr19	-	749	3	FSM	ENSG00000076924.12	ENST00000600230.1	749	3	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_2	8	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCCGTCCCAGCTGGCT	8255	False	NA	NA	False	NA	NA	NA	7621297	7620274	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_7620670_7620845_7621037_7621134
H1_mix_00044844	chr19	-	4469	6	FSM	ENSG00000183248.12	ENST00000618550.5	4467	6	0	-2	0	2	multi-exon	FALSE	canonical	3	74	junction_1	37.6542162313864	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCGCTGTCACAGAGAGG	-9	True	NA	-4	True	AATAAA	-24	NA	7874390	7868716	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_7869545_7869714_7872757_7872848_7872962_7873196_7873300_7873418_7873697_7874285
H1_mix_00044845	chr19	-	1261	6	FSM	ENSG00000183248.12	ENST00000615988.3	1261	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	72.1958447557752	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGTGGTGGAGGTGGAGA	1121	False	NA	NA	False	NA	NA	NA	7873597	7869063	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_7869545_7869714_7869918_7872304_7872487_7872848_7872962_7873196_7873300_7873418
H1_mix_00044846	chr19	-	402	1	FSM	ENSG00000269153.1	ENST00000600506.1	676	1	227	47	227	-47	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGGCAGCTGTGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	7879893	7879491	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_7879500_7879900
H1_mix_00044847	chr19	-	360	1	FSM	ENSG00000260500.1	ENST00000564226.1	506	1	66	80	66	-80	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGCCTGCCGCGGGTGACC	9821	False	NA	NA	False	NA	NA	NA	7919091	7918731	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_7918700_7919100
H1_mix_00044848	chr19	-	1237	2	FSM	ENSG00000178531.6	ENST00000318978.6	1237	2	0	0	0	0	multi-exon	FALSE	canonical	3	459	junction_1	0	243	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAAGTAGCGTGCTGAGT	5	True	NA	-35	True	AATAAA	-25	NA	7926135	7924490	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_7925559_7925966
H1_mix_00044849	chr19	-	2251	1	FSM	ENSG00000104980.8	ENST00000599939.1	2227	1	0	-24	0	24	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCGCGGGAGTGGCCGAG	NA	False	NA	17	True	AAAACA	-43	NA	7928944	7926693	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_7926700_7928900
H1_mix_00044850	chr19	-	1815	13	FSM	ENSG00000104980.8	ENST00000595831.5	1797	13	0	-18	0	0	multi-exon	FALSE	canonical	3	13	junction_9	127.884143531036	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACGGAGTCTGAAGTGTC	93	False	NA	-7	True	AATAAA	-22	NA	7943635	7926717	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_7927307_7927656_7927768_7928076_7928167_7931137_7931189_7932626_7932752_7932839_7932933_7933484_7933571_7933863_7934004_7934088_7934242_7935064_7935146_7938026_7938198_7941101_7941198_7943606
H1_mix_00044851	chr19	-	1867	13	FSM	ENSG00000104980.8	ENST00000270538.8	1843	13	0	-24	0	24	multi-exon	TRUE	canonical	3	407	junction_9	31.2635526167808	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCGCGGGAGTGGCCGAG	-3	True	NA	17	True	AAAACA	-43	NA	7943666	7926693	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_7927307_7927656_7927768_7928076_7928167_7931137_7931189_7932626_7932752_7932839_7932933_7933484_7933571_7933863_7934004_7934088_7934239_7935064_7935146_7938026_7938198_7941101_7941198_7943606
H1_mix_00044853	chr19	-	6070	6	FSM	ENSG00000066044.15	ENST00000407627.7	6054	6	0	-16	0	16	multi-exon	FALSE	canonical	3	1825	junction_1	117.117035481607	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGTGTATGACTTGTGA	-6	True	NA	17	True	AATAAA	-36	NA	8005641	7958556	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_7963808_7967564_7967791_7973724_7973879_7981082_7981187_7991643_7991832_8005494
H1_mix_00044854	chr19	-	5998	7	NNC	ENSG00000066044.15	novel	6054	6	NA	NA	0	0	intron_retention	TRUE	canonical	0	0	junction_1	755.935990823444	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGGTGTAGGGGTGAT	-6	True	NA	1	True	AATAAA	-20	NA	8005641	7958572	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_7961305_7961360_7963808_7967564_7967791_7973724_7973879_7981082_7981187_7991643_7991832_8005494
H1_mix_00044857	chr19	-	8661	58	NIC	ENSG00000142449.13	novel	9090	64	NA	NA	2240	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_42	34.3195115119908	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCCTGCCCTTTGGCAA	4337	False	NA	-7	True	AATAAA	-16	NA	8145257	8065401	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_8066261_8072047_8072199_8073062_8073298_8075070_8075191_8075282_8075412_8081002_8081120_8081357_8081481_8083246_8083373_8085362_8085570_8086199_8086326_8087076_8087212_8087824_8087948_8088059_8088180_8089544_8089671_8089893_8089960_8090098_8090252_8091464_8091591_8094445_8094566_8095374_8095504_8095963_8096081_8096443_8096570_8096880_8097007_8097288_8097415_8100900_8100973_8102723_8102874_8103561_8103688_8106107_8106234_8108169_8108239_8109226_8109389_8109630_8109754_8110844_8110968_8111057_8111184_8111647_8111771_8111976_8112100_8115514_8115641_8116673_8116800_8117168_8117292_8117463_8117590_8118896_8119023_8121257_8121387_8123463_8123590_8123783_8124009_8126296_8126348_8126467_8126606_8126712_8126833_8129027_8129154_8129239_8129366_8131234_8131289_8131553_8131830_8132983_8133107_8135960_8136087_8136189_8136310_8136387_8136532_8138140_8138324_8138411_8138565_8141716_8141843_8141939_8142138_8144876
H1_mix_00044858	chr19	-	9111	64	FSM	ENSG00000142449.13	ENST00000600128.6	9108	64	0	-3	0	3	multi-exon	FALSE	canonical	3	26	junction_59	34.3950710432255	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCCCTTTGGCAAGTT	2	True	NA	-4	True	AATAAA	-19	NA	8149592	8065398	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8066261_8072047_8072199_8073062_8073298_8075070_8075191_8075282_8075412_8081002_8081120_8081357_8081481_8083246_8083373_8085362_8085570_8086199_8086326_8087076_8087212_8087824_8087948_8088059_8088180_8089544_8089671_8089893_8089960_8090098_8090252_8091464_8091591_8094445_8094566_8095374_8095504_8095963_8096081_8096443_8096570_8096880_8097007_8097288_8097415_8100900_8100973_8102723_8102874_8103561_8103688_8106107_8106234_8108169_8108239_8109226_8109389_8109630_8109754_8110844_8110968_8111057_8111184_8111647_8111771_8111976_8112100_8115514_8115641_8116673_8116800_8117168_8117292_8117463_8117590_8118896_8119023_8121257_8121387_8123463_8123590_8123783_8124009_8125891_8126018_8126296_8126348_8126467_8126606_8126712_8126833_8129027_8129154_8129239_8129366_8131234_8131289_8131553_8131830_8132983_8133107_8135960_8136087_8136189_8136310_8136387_8136532_8138140_8138324_8138411_8138565_8141716_8141843_8141939_8142138_8144876_8144973_8145842_8145939_8146126_8146226_8147103_8147187_8147313_8147498_8149448
H1_mix_00044859	chr19	-	9197	63	NIC	ENSG00000142449.13	novel	9108	64	NA	NA	-185	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_59	34.4509182000756	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCCTGCCCTTTGGCAA	NA	False	NA	-7	True	AATAAA	-16	NA	8149777	8065401	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_8066261_8072047_8072199_8073062_8073298_8075070_8075191_8075282_8075412_8081002_8081120_8081357_8081481_8083246_8083373_8085362_8085570_8086199_8086326_8087076_8087212_8087824_8087948_8088059_8088180_8089544_8089671_8089893_8089960_8090098_8090252_8091464_8091591_8094445_8094566_8095374_8095504_8095963_8096081_8096443_8096570_8096880_8097007_8097288_8097415_8100900_8100973_8102723_8102874_8103561_8103688_8106107_8106234_8108169_8108239_8109226_8109389_8109630_8109754_8110844_8110968_8111057_8111184_8111647_8111771_8111976_8112100_8115514_8115641_8116673_8116800_8117168_8117292_8117463_8117590_8118896_8119023_8121257_8121387_8123463_8123590_8123783_8124009_8125891_8126018_8126296_8126348_8126467_8126606_8126712_8126833_8129027_8129154_8129239_8129366_8131234_8131289_8131553_8131830_8132983_8133107_8135960_8136087_8136189_8136310_8136387_8136532_8138140_8138324_8138411_8138565_8141716_8141843_8141939_8142138_8144876_8144973_8146126_8146226_8147103_8147187_8147313_8147498_8149448
H1_mix_00044861	chr19	-	479	2	FSM	ENSG00000142449.13	ENST00000595036.1	479	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTGCCACGAGTGTGAT	NA	False	NA	NA	False	NA	NA	NA	8081056	8074765	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8075191_8081002
H1_mix_00044862	chr19	-	453	4	FSM	ENSG00000142449.13	ENST00000598269.1	453	4	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	11.3431330181157	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGCCTGACTAATATGGT	NA	False	NA	NA	False	NA	NA	NA	8089977	8087824	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8087948_8088059_8088180_8089544_8089671_8089893
H1_mix_00044864	chr19	-	539	5	NNC	ENSG00000267855.6	novel	580	4	NA	NA	0	33447	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	808.063541746563	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCCAGGCATGGCACAGT	1	True	NA	NA	False	NA	NA	NA	8321375	8275320	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_8275355_8311358_8311596_8316495_8316646_8320856_8320907_8321307
H1_mix_00044867	chr19	-	1253	5	FSM	ENSG00000167775.11	ENST00000301458.10	1253	5	0	0	0	0	multi-exon	FALSE	canonical	3	1336	junction_2	75.0866166503725	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGCCTCTGGGTCTCTG	-24	True	NA	-6	True	ATTAAA	-17	NA	8308358	8302126	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8302606_8302776_8302981_8303854_8304089_8305030_8305157_8308148
H1_mix_00044870	chr19	-	595	5	FSM	ENSG00000267855.6	ENST00000593729.5	569	5	-26	0	-26	0	multi-exon	FALSE	canonical	3	35	junction_1	792.939625696686	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGATCCCTGCCCTCCAG	943	False	NA	-5	True	AATAAA	-13	NA	8321401	8308767	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8308885_8311411_8311596_8316495_8316646_8320856_8320907_8321307
H1_mix_00044872	chr19	-	606	4	FSM	ENSG00000267855.6	ENST00000301457.3	580	4	-26	0	-26	0	multi-exon	FALSE	canonical	3	1785	junction_2	59.5893353620334	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGGCATGAGCCACCACAC	943	False	NA	53	True	NA	NA	NA	8321401	8311283	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8311596_8316495_8316646_8320856_8320907_8321307
H1_mix_00044873	chr19	-	2787	11	FSM	ENSG00000186994.12	ENST00000330915.7	2787	11	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_10	8.17373843476778	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTTGTGTTTTGTTTGGGG	0	True	NA	0	True	AATAAA	-13	NA	8343262	8322583	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8322923_8324448_8324548_8324629_8324831_8324950_8325097_8333013_8333231_8333723_8333809_8333909_8334117_8334319_8334420_8334499_8335793_8337794_8337857_8343224
H1_mix_00044874	chr19	-	1020	3	FSM	ENSG00000269386.6	ENST00000593581.6	1020	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	6.5	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTCTGAGGTTGCTTTTA	-13	True	NA	NA	False	AAAAAG	-30	NA	8390685	8374371	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8374609_8376961_8377068_8390008
H1_mix_00044877	chr19	-	598	3	FSM	ENSG00000133250.14	ENST00000596772.5	579	3	0	-19	0	19	multi-exon	TRUE	canonical	3	200	junction_1	28.5	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTCCATCCAAAGCATAGT	2462	False	NA	5	True	AATAAA	-40	NA	8511699	8510560	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8511025_8511485_8511537_8511616
H1_mix_00044878	chr19	-	1194	6	FSM	ENSG00000133250.14	ENST00000255616.8	1178	6	-16	0	0	0	multi-exon	TRUE	canonical	3	257	junction_1	12.0266371026983	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGCACCTGCGCCTTC	-3	True	NA	-3	True	AATACA	-19	NA	8514164	8511334	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8511537_8511616_8511961_8512386_8512493_8512603_8512712_8513028_8513342_8514043
H1_mix_00044879	chr19	-	586	2	FSM	ENSG00000133250.14	ENST00000602128.1	443	2	0	-143	0	-7	multi-exon	FALSE	canonical	3	257	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAATGACTGGCACCTG	2154	False	NA	-10	True	AATACA	-12	NA	8512007	8511341	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8511537_8511616
H1_mix_00044881	chr19	-	576	2	FSM	ENSG00000142303.14	ENST00000601872.1	576	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGAGGTGCATGGAGTGT	NA	False	NA	NA	False	NA	NA	NA	8596357	8595612	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8595904_8596072
H1_mix_00044885	chr19	-	3541	11	FSM	ENSG00000174652.20	ENST00000592904.7	3544	11	3	0	1	0	multi-exon	FALSE	canonical	3	17	junction_7	18.3709009033308	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCCGTTCATTAGCTA	-4	True	NA	-11	True	AATAAA	-16	NA	9435570	9412428	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9414721_9415653_9415743_9417827_9417909_9418504_9418632_9419216_9419300_9420064_9420219_9433667_9433787_9434074_9434236_9434797_9434860_9435107_9435194_9435283
H1_mix_00044886	chr19	-	3035	9	NIC	ENSG00000174652.20	novel	3503	9	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_6	19.2382269193395	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCAGTCTGTTATTTTG	11	True	NA	-6	True	AATAAA	-16	NA	9435513	9412597	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_9414721_9415653_9415743_9417827_9417909_9418504_9418632_9419216_9419300_9420064_9420219_9434797_9434860_9435107_9435194_9435283
H1_mix_00044887	chr19	-	3335	11	NIC	ENSG00000174652.20	novel	3544	11	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	20.9811820448706	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCAGTCTGTTATTTTG	1	True	NA	-6	True	AATAAA	-16	NA	9435523	9412597	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_9414721_9415653_9415743_9417827_9417909_9418504_9418632_9419216_9419300_9420064_9420219_9433667_9433787_9434064_9434236_9434797_9434860_9435107_9435194_9435283
H1_mix_00044888	chr19	-	3702	11	NNC	ENSG00000174652.20	novel	3653	12	NA	NA	0	0	intron_retention	FALSE	canonical	2	10	junction_4	20.8060087474749	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGAGGCAATAAATTTCT	20	True	NA	-36	True	NA	NA	NA	9435504	9412627	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_9414721_9415653_9415743_9417827_9417909_9418504_9418632_9418765_9419300_9420064_9420219_9433692_9433787_9434074_9434236_9434797_9434860_9435107_9435194_9435283
H1_mix_00044889	chr19	-	760	4	FSM	ENSG00000174652.20	ENST00000591213.1	760	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	12.8322510366134	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGAGGGGAGGTCAGTGAT	NA	False	NA	NA	False	NA	NA	NA	9419081	9414707	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9414721_9415653_9415743_9417827_9417909_9418504
H1_mix_00044892	chr19	-	6987	4	FSM	ENSG00000197961.12	ENST00000320451.7	6987	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	6.84754619472471	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTTGGGTCAATTTTGT	-2	True	NA	-27	True	AATAAA	-17	NA	9584504	9560328	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9567110_9568094_9568176_9569001_9569083_9584460
H1_mix_00044893	chr19	-	7177	6	FSM	ENSG00000197961.12	ENST00000586602.5	7177	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	19.1143924831526	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAATAAAAATTGTAATAAA	5	True	NA	-51	True	NA	NA	NA	9584497	9560352	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9567110_9567647_9567706_9568094_9568176_9569001_9569083_9584185_9584349_9584460
H1_mix_00044894	chr19	-	4495	6	FSM	ENSG00000171469.11	ENST00000302851.8	4529	6	44	-10	0	7	multi-exon	FALSE	canonical	3	71	junction_3	28.4070413806155	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCATGTCTATAGTTCTAG	602	False	NA	-5	True	AATAAA	-24	NA	9621188	9607318	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9611337_9614020_9614104_9617044_9617172_9618090_9618180_9619431_9619583_9621161
H1_mix_00044895	chr19	-	4622	7	NIC	ENSG00000171469.11	novel	4529	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	60.1710524717289	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTGATGCATGTCTATA	602	False	NA	-12	True	AATAAA	-17	NA	9621188	9607325	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_9611337_9614020_9614104_9617044_9617172_9618090_9618180_9619431_9619583_9620915_9621050_9621161
H1_mix_00044896	chr19	-	4657	7	NIC	ENSG00000171469.11	novel	659	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_3	47.109800820353	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTGATGCATGTCTATA	-2	True	NA	-12	True	AATAAA	-17	NA	9621219	9607325	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_9611337_9614020_9614104_9617044_9617172_9617620_9617759_9618090_9618180_9619431_9619583_9621161
H1_mix_00044900	chr19	-	915	6	NIC	ENSG00000196605.7	novel	2016	6	NA	NA	-75	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	6.21610810716802	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTTGGAGAACTTTTCT	-7	True	NA	-3	True	AATAAA	-34	NA	9786164	9758473	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_9758765_9759859_9759943_9762081_9762169_9763281_9763409_9764935_9765036_9785937
H1_mix_00044902	chr19	-	2004	2	FSM	ENSG00000127452.9	ENST00000586651.5	1736	2	-267	-1	7	1	multi-exon	FALSE	canonical	3	279	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCAGTTTATTCATTCAA	-24	True	NA	-1	True	ATTAAA	-30	NA	9819096	9810265	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9811718_9818544
H1_mix_00044903	chr19	-	1877	3	FSM	ENSG00000127452.9	ENST00000247977.9	1873	3	0	-4	0	1	multi-exon	FALSE	canonical	3	274	junction_2	2.5	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCAGTTTATTCATTCAA	-7	True	NA	-1	True	ATTAAA	-30	NA	9819079	9810265	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9811718_9818544_9818618_9818727
H1_mix_00044904	chr19	-	1921	4	FSM	ENSG00000127452.9	ENST00000589626.5	1920	4	0	-1	0	1	multi-exon	FALSE	canonical	3	42	junction_1	108.435336593853	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCAGTTTATTCATTCAA	-7	True	NA	-1	True	ATTAAA	-30	NA	9819079	9810265	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9811718_9813230_9813275_9818544_9818618_9818727
H1_mix_00044905	chr19	-	1848	3	FSM	ENSG00000127452.9	ENST00000588922.5	1843	3	0	-5	0	1	multi-exon	FALSE	canonical	3	66	junction_2	106.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCAGTTTATTCATTCAA	-4	True	NA	-1	True	ATTAAA	-30	NA	9819076	9810265	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9811718_9818544_9818618_9818753
H1_mix_00044907	chr19	-	879	4	FSM	ENSG00000127452.9	ENST00000592067.1	879	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	10.4986771653491	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGCTCAGCTATCTGCAG	-7	True	NA	NA	False	NA	NA	NA	9819079	9811281	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9811718_9813230_9813275_9818544_9818618_9818753
H1_mix_00044908	chr19	-	2124	6	FSM	ENSG00000105088.9	ENST00000593091.2	2124	6	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_5	270.058067829865	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTCGGTGACTGTGTGTG	0	True	NA	-3	True	AATAAA	-20	NA	9913836	9853717	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9854864_9856806_9856914_9857262_9857483_9857714_9857862_9860644_9860795_9913482
H1_mix_00044909	chr19	-	1982	6	FSM	ENSG00000105088.9	ENST00000264833.9	1982	6	0	0	0	0	multi-exon	FALSE	canonical	3	680	junction_4	46.4955911888428	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTCGGTGACTGTGTGTG	-2	True	NA	-3	True	AATAAA	-20	NA	9936515	9853717	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9854864_9856806_9856914_9857262_9857483_9857714_9857862_9860644_9860795_9936303
H1_mix_00044913	chr19	-	762	5	FSM	ENSG00000130811.12	ENST00000590940.5	762	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	885.416109803747	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGATTCTTTTAATTTTTT	207	False	NA	70	True	AATAAA	-37	NA	10119700	10118075	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10118558_10118667_10118728_10118867_10118957_10119087_10119172_10119653
H1_mix_00044915	chr19	-	352	3	FSM	ENSG00000130811.12	ENST00000587168.1	352	3	0	0	0	0	multi-exon	FALSE	canonical	3	2127	junction_2	24	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCAAGAAGTTCAAGGTGA	59	False	NA	NA	False	CATAAA	-31	NA	10119848	10118883	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10118957_10119087_10119172_10119653
H1_mix_00044916	chr19	-	5230	41	NNC	ENSG00000130816.17	novel	5274	41	NA	NA	0	9153	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	127.654964650812	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGTGCCAGGTGCGGTGGC	3	True	NA	NA	False	NA	NA	NA	10194934	10124188	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_10124212_10133345_10133702_10134216_10134308_10135735_10135853_10136120_10136288_10137084_10137281_10137831_10138010_10138438_10138606_10139675_10139818_10140045_10140329_10140780_10140910_10141104_10141190_10142027_10142221_10143765_10143988_10146350_10146525_10148883_10149018_10149452_10149658_10149852_10149969_10151397_10151546_10151749_10151848_10154292_10154480_10154585_10154774_10154904_10155057_10155852_10155946_10156390_10156510_10159657_10159768_10159841_10159923_10160017_10160064_10160383_10160419_10162666_10162749_10163325_10163361_10166597_10166686_10168329_10168365_10173089_10173175_10173870_10173906_10175539_10175619_10177291_10177368_10180349_10180570_10180777_10180886_10182040_10182078_10194819
H1_mix_00044917	chr19	-	5274	41	FSM	ENSG00000130816.17	ENST00000359526.9	5274	41	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_36	139.926764326915	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGTGGGTATTCGTGA	-16	True	NA	42	True	AATAAA	-17	NA	10194953	10133345	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10133702_10134216_10134308_10135735_10135853_10136120_10136288_10137084_10137281_10137831_10138010_10138438_10138606_10139675_10139818_10140045_10140329_10140780_10140910_10141104_10141190_10142027_10142221_10143765_10143988_10146350_10146525_10148883_10149018_10149452_10149658_10149852_10149969_10151397_10151546_10151749_10151848_10154292_10154480_10154585_10154774_10154904_10155057_10155852_10155946_10156390_10156510_10159657_10159768_10159841_10159923_10160017_10160064_10160383_10160419_10162666_10162749_10163325_10163361_10166597_10166686_10168329_10168365_10173089_10173175_10173870_10173906_10175539_10175619_10177291_10177368_10180186_10180235_10180349_10180570_10180777_10180886_10182040_10182078_10194819
H1_mix_00044918	chr19	-	5372	40	FSM	ENSG00000130816.17	ENST00000340748.8	5408	40	36	0	36	0	multi-exon	FALSE	canonical	3	487	junction_32	84.3584288034732	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGTGGGTATTCGTGA	-3	True	NA	42	True	AATAAA	-17	NA	10195099	10133345	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10133702_10134216_10134308_10135735_10135853_10136120_10136288_10137084_10137281_10137831_10138010_10138438_10138606_10139675_10139818_10140045_10140329_10140780_10140910_10141104_10141190_10142027_10142221_10143765_10143988_10146350_10146525_10148883_10149018_10149452_10149658_10149852_10149969_10151397_10151546_10151749_10151848_10154292_10154480_10154585_10154774_10154904_10155057_10155852_10155946_10156390_10156510_10159657_10159768_10159841_10159923_10160017_10160064_10160383_10160419_10162666_10162749_10163325_10163361_10166597_10166686_10168329_10168365_10173089_10173175_10173870_10173906_10175539_10175619_10177291_10177368_10180349_10180570_10180777_10180886_10182040_10182078_10194819
H1_mix_00044919	chr19	-	2210	8	FSM	ENSG00000130816.17	ENST00000678107.1	2204	8	0	-6	0	0	multi-exon	FALSE	canonical	3	600	junction_4	75.0779187081729	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACCCTGGGTGGGTATT	2281	False	NA	37	True	AATAAA	-12	NA	10140618	10133350	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10133702_10134216_10134308_10135735_10135853_10136120_10136288_10137084_10137281_10137831_10138010_10138438_10138606_10139675
H1_mix_00044920	chr19	-	5851	30	FSM	ENSG00000130816.17	ENST00000676868.1	5845	30	0	-6	0	0	multi-exon	FALSE	canonical	3	493	junction_22	81.4963214885876	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACCCTGGGTGGGTATT	8281	False	NA	37	True	AATAAA	-12	NA	10164887	10133350	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10133702_10134216_10134308_10135735_10135853_10136120_10136288_10137084_10137281_10137831_10138010_10138438_10138606_10139675_10139818_10140045_10140329_10140780_10140910_10141104_10141190_10142027_10142221_10143765_10143988_10146350_10146525_10148883_10149018_10149452_10149658_10149852_10149969_10151397_10151546_10151749_10151848_10154292_10154480_10154585_10154774_10154904_10155057_10155852_10155946_10156390_10156510_10159657_10159768_10159841_10159923_10160017_10160064_10160383_10160419_10162666_10162749_10163325
H1_mix_00044921	chr19	-	6061	39	FSM	ENSG00000130816.17	ENST00000676820.1	6055	39	0	-6	0	0	multi-exon	FALSE	canonical	3	487	junction_31	85.4543381333983	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACCCTGGGTGGGTATT	-18	True	NA	37	True	AATAAA	-12	NA	10194955	10133350	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10133702_10134216_10134308_10135735_10135853_10136120_10136288_10137084_10137281_10137831_10138010_10138438_10138606_10139675_10139818_10140045_10140329_10140780_10140910_10141104_10142221_10143765_10143988_10146350_10146525_10148883_10149018_10149452_10149658_10149852_10149969_10151397_10151546_10151749_10151848_10154292_10154480_10154585_10154774_10154904_10155057_10155852_10155946_10156390_10156510_10159657_10159768_10159841_10159923_10160017_10160064_10160383_10160419_10162666_10162749_10163325_10163361_10166597_10166686_10168329_10168365_10173089_10173175_10173870_10173906_10175539_10175619_10177291_10177368_10180349_10180570_10180777_10180886_10182040_10182078_10194819
H1_mix_00044922	chr19	-	5132	39	FSM	ENSG00000130816.17	ENST00000679103.1	5126	39	0	-6	0	0	multi-exon	FALSE	canonical	3	53	junction_1	116.127631213686	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACCCTGGGTGGGTATT	-18	True	NA	37	True	AATAAA	-12	NA	10194955	10133350	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10133702_10135735_10135853_10136120_10136288_10137084_10137281_10137831_10138010_10138438_10138606_10139675_10139818_10140045_10140329_10140780_10140910_10141104_10141190_10142027_10142221_10143765_10143988_10146350_10146525_10148883_10149018_10149452_10149658_10149852_10149969_10151397_10151546_10151749_10151848_10154292_10154480_10154585_10154774_10154904_10155057_10155852_10155946_10156390_10156510_10159657_10159768_10159841_10159923_10160017_10160064_10160383_10160419_10162666_10162749_10163325_10163361_10166597_10166686_10168329_10168365_10173089_10173175_10173870_10173906_10175539_10175619_10177291_10177368_10180349_10180570_10180777_10180886_10182040_10182078_10194819
H1_mix_00044923	chr19	-	5171	40	FSM	ENSG00000130816.17	ENST00000677634.1	5165	40	0	-6	0	0	multi-exon	FALSE	canonical	3	14	junction_11	127.604449230859	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACCCTGGGTGGGTATT	-18	True	NA	37	True	AATAAA	-12	NA	10194955	10133350	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10133702_10134216_10134308_10135735_10135853_10136120_10136288_10137084_10137281_10137831_10138010_10138438_10138606_10139675_10139818_10140045_10140329_10140780_10140910_10141104_10141190_10142079_10142221_10143765_10143988_10146350_10146525_10148883_10149018_10149452_10149658_10149852_10149969_10151397_10151546_10151749_10151848_10154292_10154480_10154585_10154774_10154904_10155057_10155852_10155946_10156390_10156510_10159657_10159768_10159841_10159923_10160017_10160064_10160383_10160419_10162666_10162749_10163325_10163361_10166597_10166686_10168329_10168365_10173089_10173175_10173870_10173906_10175539_10175619_10177291_10177368_10180349_10180570_10180777_10180886_10182040_10182078_10194819
H1_mix_00044925	chr19	-	5665	39	FSM	ENSG00000130816.17	ENST00000677946.1	5665	39	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_31	80.3934231954007	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATGAGTGGAAATTAAGA	-18	True	NA	32	True	TTTAAA	-35	NA	10194955	10133423	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10134308_10135735_10135853_10136120_10136288_10137084_10137281_10137831_10138010_10138438_10138606_10139675_10139818_10140045_10140329_10140780_10140910_10141104_10141190_10142027_10142221_10143765_10143988_10146350_10146525_10148883_10149018_10149452_10149658_10149852_10149969_10151397_10151546_10151749_10151848_10154292_10154480_10154585_10154774_10154904_10155057_10155852_10155946_10156390_10156510_10159657_10159768_10159841_10159923_10160017_10160064_10160383_10160419_10162666_10162749_10163325_10163361_10166597_10166686_10168329_10168365_10173089_10173175_10173870_10173906_10175539_10175619_10177291_10177368_10180349_10180570_10180777_10180886_10182040_10182078_10194819
H1_mix_00044929	chr19	-	3022	1	ISM	ENSG00000267534.4	ENST00000646641.1	3643	2	6874	3	6874	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCCTGTGGTTGGTGTGT	6859	False	NA	-10	True	AATAAA	-14	NA	10224457	10221435	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_10221400_10224500
H1_mix_00044930	chr19	-	2308	4	FSM	ENSG00000220201.7	ENST00000403903.7	2303	4	0	-5	0	5	multi-exon	FALSE	canonical	3	36	junction_1	2.82842712474619	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGTGATTTGGGATCCC	7218	False	NA	4	True	AATAAA	-25	NA	10309880	10304797	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10305209_10305389_10305484_10305845_10305953_10308184
H1_mix_00044931	chr19	-	1297	6	FSM	ENSG00000220201.7	ENST00000403352.1	1028	6	0	-269	0	-3	multi-exon	FALSE	canonical	3	13	junction_5	10.4	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAAAAAGCCTGTGATTT	7315	False	NA	-4	True	AATAAA	-17	NA	10309783	10304805	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10305209_10305389_10305484_10305845_10305953_10308184_10308551_10309348_10309449_10309556
H1_mix_00044932	chr19	-	1467	5	ISM	ENSG00000220201.7	ENST00000403352.1	1028	6	-68	-263	29	-9	intron_retention	FALSE	canonical	3	24	junction_4	6.53834841531101	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCCGAGAGAAAAAGCCTG	7247	False	NA	-10	True	AATAAA	-11	NA	10309851	10304811	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_10305209_10305389_10305484_10305845_10305953_10308184_10308551_10309348
H1_mix_00044933	chr19	-	1012	5	FSM	ENSG00000267673.6	ENST00000393708.3	1012	5	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_4	122.427529583832	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTGGAGTGGTGGTAAGTG	-8	True	NA	NA	False	AGTAAA	-6	NA	10316015	10310044	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10310643_10310852_10310941_10315385_10315493_10315704_10315760_10315851
H1_mix_00044934	chr19	-	773	4	FSM	ENSG00000267673.6	ENST00000492239.5	773	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	231.357347456748	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGCATGTTGAGTGTC	1303	False	NA	-7	True	AATAAA	-13	NA	10315795	10310216	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10310643_10310852_10310941_10315385_10315554_10315704
H1_mix_00044937	chr19	-	3477	14	NNC	ENSG00000161847.14	novel	3484	13	NA	NA	0	2541	intron_retention	FALSE	non_canonical	0	0	junction_1	176.309840233929	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATATATATATATAT	6172	False	NA	NA	False	NA	NA	NA	10333491	10313670	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_10313702_10316211_10317601_10317689_10317774_10318228_10318373_10319165_10319241_10320654_10320952_10321047_10321260_10321530_10321619_10322644_10322740_10323144_10323275_10323374_10323567_10328641_10329112_10330459_10330527_10333288
H1_mix_00044938	chr19	-	3457	14	NNC	ENSG00000161847.14	novel	3484	13	NA	NA	0	2541	intron_retention	FALSE	non_canonical	0	0	junction_1	176.309840233929	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATATATATATATAT	6172	False	NA	NA	False	NA	NA	NA	10333491	10313670	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_10313705_10316234_10317601_10317689_10317774_10318228_10318373_10319165_10319241_10320654_10320952_10321047_10321260_10321530_10321619_10322644_10322740_10323144_10323275_10323374_10323567_10328641_10329112_10330459_10330527_10333288
H1_mix_00044939	chr19	-	3391	14	NIC	ENSG00000161847.14	novel	3484	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_5	159.890643101713	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGAGTTGGCTGGTTCTTG	6152	False	NA	NA	False	ATTAAA	-28	NA	10333511	10316211	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_10317601_10317689_10317774_10318228_10318373_10319165_10319241_10320654_10320783_10320857_10320952_10321047_10321260_10321530_10321619_10322644_10322740_10323144_10323275_10323374_10323567_10328641_10329112_10330459_10330527_10333288
H1_mix_00044940	chr19	-	3590	13	FSM	ENSG00000161847.14	ENST00000611074.4	3586	13	0	-4	0	0	multi-exon	FALSE	canonical	3	602	junction_3	36.4062723533551	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCAGAGTTGGCTGGTTC	6025	False	NA	NA	False	ATTAAA	-25	NA	10333638	10316214	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10317601_10317689_10317774_10318228_10318373_10319165_10319241_10320654_10320952_10321047_10321260_10321530_10321619_10322644_10322740_10323144_10323275_10323374_10323567_10328641_10329112_10330459_10330527_10333288
H1_mix_00044941	chr19	-	742	4	FSM	ENSG00000161847.14	ENST00000591969.1	742	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	309.85588047779	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGGCGGAGGAGGCACAG	6172	False	NA	NA	False	NA	NA	NA	10333491	10323505	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10323567_10328641_10329053_10330459_10330527_10333288
H1_mix_00044942	chr19	-	627	3	NNC	ENSG00000076662.10	novel	2057	6	NA	NA	100	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	57.5	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTTGATTCCACCC	5040	False	NA	-1	True	AATAAA	-18	NA	10334623	10333775	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_10334060_10334159_10334409_10334529
H1_mix_00044943	chr19	-	1735	7	FSM	ENSG00000076662.10	ENST00000160262.10	1735	7	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_4	44.4575327950419	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTTGATTCCACCC	5	True	NA	-1	True	AATAAA	-18	NA	10339624	10333775	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10334060_10334159_10334409_10334527_10334783_10335065_10335354_10335670_10335977_10338681_10338949_10339538
H1_mix_00044944	chr19	-	2274	6	FSM	ENSG00000076662.10	ENST00000589900.5	2057	6	-217	0	-185	0	multi-exon	FALSE	canonical	3	21	junction_3	45.9103474175485	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTTGATTCCACCC	NA	False	NA	-1	True	AATAAA	-18	NA	10339846	10333775	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10334060_10334159_10334409_10334527_10334783_10335065_10335977_10338681_10338949_10339538
H1_mix_00044945	chr19	-	2491	4	FSM	ENSG00000076662.10	ENST00000587992.1	2491	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	43.8710230866191	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTTGATTCCACCC	2	True	NA	-1	True	AATAAA	-18	NA	10339661	10333775	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10334060_10334159_10335977_10338681_10338949_10339538
H1_mix_00044946	chr19	-	4250	25	FSM	ENSG00000105397.14	ENST00000525621.6	4243	25	0	-7	0	3	multi-exon	FALSE	canonical	3	30	junction_5	11.2348663642351	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGATTTTTGGAGCCCTC	3	True	NA	-4	True	AATAAA	-23	NA	10380572	10350525	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10350969_10351051_10351163_10352433_10352552_10352925_10353099_10353527_10353647_10354041_10354235_10354511_10354610_10356567_10356719_10357763_10357919_10358002_10358139_10359174_10359303_10361510_10361599_10361769_10361956_10362077_10362182_10362263_10362457_10362548_10362658_10364613_10364772_10364850_10365049_10365516_10365899_10366416_10366581_10368054_10368203_10368294_10368419_10378213_10378427_10379614_10379780_10380379
H1_mix_00044947	chr19	-	3634	21	NIC	ENSG00000105397.14	novel	4243	25	NA	NA	22	-4	combination_of_known_junctions	FALSE	canonical	3	37	junction_15	8.33966426182733	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTGGAGCCTGTGATTT	11	True	NA	-15	True	AATAAA	-12	NA	10380488	10350536	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_10350969_10354041_10354235_10354511_10354610_10356567_10356719_10357763_10357919_10358002_10358139_10359174_10359303_10361510_10361599_10361769_10361956_10362077_10362182_10362263_10362457_10362548_10362658_10364613_10364772_10364850_10365049_10365516_10365899_10366416_10366581_10368054_10368203_10368294_10368419_10378213_10378427_10379614_10379780_10380379
H1_mix_00044948	chr19	-	628	6	FSM	ENSG00000105397.14	ENST00000527481.2	628	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	20.3017240647192	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGGAGACAGAGGCGTCC	NA	False	NA	NA	False	NA	NA	NA	10354522	10350946	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10350969_10351051_10351163_10352433_10352552_10352925_10353099_10354041_10354235_10354511
H1_mix_00044949	chr19	-	711	4	FSM	ENSG00000105397.14	ENST00000529412.1	711	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	4.24264068711928	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCATCTGGGTGAGCGTGGC	6990	False	NA	NA	False	NA	NA	NA	10357901	10353910	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10354235_10354511_10354610_10356567_10356719_10357763
H1_mix_00044950	chr19	-	1618	8	FSM	ENSG00000105401.9	ENST00000222005.7	1618	8	0	0	0	0	multi-exon	FALSE	canonical	3	1236	junction_5	125.502093648688	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGCTGCTGGGAGGGCC	-11	True	NA	-29	True	AATAAA	-16	NA	10403542	10391132	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10391707_10393085_10393158_10393258_10393442_10395020_10395144_10395227_10395344_10395434_10395544_10395927_10396204_10403377
H1_mix_00044951	chr19	-	1044	3	FSM	ENSG00000079999.14	ENST00000592478.5	1044	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	290.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCTGGGCTGGAGG	543	False	NA	-7	True	AATAAA	-25	NA	10491720	10486124	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10486819_10489647_10489854_10491576
H1_mix_00044952	chr19	-	2565	6	FSM	ENSG00000079999.14	ENST00000171111.10	2565	6	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_5	209.645033330151	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCTGGGCTGGAGG	-9	True	NA	-7	True	AATAAA	-25	NA	10503356	10486124	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10486819_10489191_10489369_10489647_10489854_10491576_10492263_10499394_10500081_10503240
H1_mix_00044953	chr19	-	2834	6	FSM	ENSG00000079999.14	ENST00000393623.6	2648	6	-34	-152	-34	151	multi-exon	FALSE	canonical	3	354	junction_5	105.129253778385	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGCCACACAGTTGTCCT	793	False	NA	NA	False	NA	NA	NA	10502930	10485973	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10486819_10489191_10489369_10489647_10489854_10491576_10492263_10499394_10500081_10502696
H1_mix_00044954	chr19	-	2105	6	NIC	ENSG00000079999.14	novel	2565	6	NA	NA	28	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_5	239.413951139026	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGCGTGGCTGTCACCAT	1066	False	NA	NA	False	NA	NA	NA	10502657	10486717	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_10486819_10489191_10489369_10489647_10489854_10491576_10492263_10499394_10500081_10502408
H1_mix_00044956	chr19	-	2684	2	FSM	ENSG00000180739.15	ENST00000333430.6	2338	2	-550	204	-66	1	multi-exon	FALSE	canonical	3	40	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTTTCTTTCTTTCTTT	NA	False	NA	-8	True	AATAAA	-19	NA	10517997	10512945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10515030_10517397
H1_mix_00044957	chr19	-	2192	2	FSM	ENSG00000180739.15	ENST00000439028.3	2191	2	0	-1	0	1	multi-exon	FALSE	canonical	3	30	junction_1	0	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTTTCTTTCTTTCTTT	20	True	NA	-8	True	AATAAA	-19	NA	10517931	10512945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10515030_10517823
H1_mix_00044958	chr19	-	3005	19	FSM	ENSG00000129347.21	ENST00000652042.1	3005	19	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_4	28.2958357534754	2002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCATCCCCTCCCTTTA	-10	True	NA	-11	True	AATAAA	-24	NA	10566026	10553084	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10554282_10555086_10555186_10555284_10555350_10557551_10557683_10557768_10557896_10557971_10558061_10558163_10558240_10559358_10559530_10559612_10559709_10559809_10559937_10560311_10560449_10561002_10561081_10561168_10561266_10561666_10561717_10561790_10561846_10562728_10562838_10564928_10565035_10565716_10565791_10565905
H1_mix_00044959	chr19	-	2545	18	FSM	ENSG00000129347.21	ENST00000478863.5	2545	18	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_7	24.6817809612411	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAACACGTGTAGCTG	3056	False	NA	NA	False	NA	NA	NA	10565971	10553575	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10554282_10555086_10555186_10555284_10555350_10557551_10557896_10557971_10558061_10558163_10558240_10559358_10559530_10559612_10559709_10559809_10559937_10560311_10560449_10561002_10561081_10561168_10561266_10561666_10561717_10561790_10561846_10562728_10562838_10564928_10565035_10565716_10565791_10565905
H1_mix_00044961	chr19	-	1428	2	FSM	ENSG00000129355.7	ENST00000393599.3	1425	2	0	-3	0	3	multi-exon	FALSE	canonical	3	41	junction_1	0	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGTGGCTTCTGATTTTTG	-3	True	NA	1	True	ATTAAA	-26	NA	10568979	10566456	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10567418_10568512
H1_mix_00044962	chr19	-	1748	12	FSM	ENSG00000129354.12	ENST00000250244.11	1748	12	0	0	0	0	multi-exon	TRUE	canonical	3	801	junction_6	103.995629278787	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGCCTATGTGCTTGT	-33	True	NA	-10	True	ATTAAA	-13	NA	10587312	10572670	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10573089_10574416_10574493_10574903_10575030_10577197_10577357_10578891_10578964_10579715_10579859_10581265_10581393_10581486_10581635_10581747_10581879_10583605_10583674_10583913_10584071_10587189
H1_mix_00044963	chr19	-	1757	12	FSM	ENSG00000129354.12	ENST00000590923.5	1757	12	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_6	269.205841548743	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGCCTATGTGCTTGT	-36	True	NA	-10	True	ATTAAA	-13	NA	10587315	10572670	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10573089_10574416_10574493_10574903_10575030_10577197_10577357_10578891_10578964_10579715_10579865_10581265_10581393_10581486_10581635_10581747_10581879_10583605_10583674_10583913_10584071_10587189
H1_mix_00044964	chr19	-	1983	1	FSM	ENSG00000267100.1	ENST00000591501.1	1983	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTCTGGTCCTTTGTTT	14	True	NA	-3	True	AATAAA	-21	NA	10653844	10651861	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10651900_10653800
H1_mix_00044965	chr19	-	1488	2	Genic_Genomic	ENSG00000267100.1	novel	1983	1	NA	NA	29	-16	multi-exon	FALSE	canonical	2	11	junction_1	0	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTCCCGTGTCAGTCT	43	False	NA	-19	True	AATAAA	-5	NA	10653815	10651877	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr19_-_10653269_10653718
H1_mix_00044966	chr19	-	1633	4	FSM	ENSG00000099203.7	ENST00000214869.7	1633	4	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_2	8.80656320908194	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGAGTGGCTTCCTCTGAAA	-5	True	NA	NA	False	AGTAAA	-15	NA	10836212	10832066	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10833214_10834933_10835118_10835255_10835354_10836008
H1_mix_00044967	chr19	-	2119	10	FSM	ENSG00000130733.11	ENST00000586748.6	2111	10	0	-8	0	0	multi-exon	FALSE	canonical	3	269	junction_1	32.4379750018743	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCCGTTGTGACCGAGGCC	-2	True	NA	-11	True	AATAAA	-22	NA	10928639	10922184	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10923175_10923271_10923408_10923494_10923678_10923832_10924000_10924075_10924193_10925685_10925774_10927629_10927717_10927798_10927960_10928379_10928441_10928510
H1_mix_00044968	chr19	-	2085	10	FSM	ENSG00000130733.11	ENST00000253031.6	2087	10	2	0	2	0	multi-exon	TRUE	canonical	3	62	junction_9	88.7311099701971	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCCGTTGTGACCGAGGCC	19	False	NA	-11	True	AATAAA	-22	NA	10928679	10922184	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10923175_10923271_10923408_10923494_10923678_10923832_10924000_10924075_10924193_10925685_10925774_10927629_10927717_10927798_10927960_10928379_10928441_10928584
H1_mix_00044972	chr19	-	2292	5	FSM	ENSG00000161888.12	ENST00000592540.6	2290	5	-3	1	-3	-1	multi-exon	FALSE	canonical	3	8	junction_1	9.86154146165801	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCAGGGCCGGCCAATCA	-3	True	NA	-15	True	AATAAA	-22	NA	11155785	11145493	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11147290_11147817_11147895_11148012_11148118_11149093_11149239_11155616
H1_mix_00044973	chr19	-	712	4	FSM	ENSG00000161888.12	ENST00000585486.1	699	4	0	-13	0	13	multi-exon	FALSE	canonical	3	17	junction_1	6.97614984548545	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTACCTCACGCCTGTAA	9147	False	NA	NA	False	AATAAA	-26	NA	11155769	11147585	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11147895_11148012_11148118_11149093_11149239_11155616
H1_mix_00044974	chr19	-	5282	13	NNC	ENSG00000197256.11	novel	5183	13	NA	NA	-257	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	85	junction_1	33.9480812745319	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTCTGTGTCTTTTCTTT	7593	False	NA	NA	False	AATAAA	-18	NA	11195942	11164269	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_11164711_11164738_11166612_11169876_11169967_11170047_11170249_11172980_11173124_11174472_11174693_11175901_11175990_11176577_11176818_11178344_11178448_11178552_11178721_11192830_11194043_11194474_11194591_11195555
H1_mix_00044975	chr19	-	5229	13	NIC	ENSG00000197256.11	novel	5183	13	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	53.6456351129024	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTCTGTGTCTTTTCTTT	16	True	NA	NA	False	AATAAA	-18	NA	11197525	11164269	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_11166612_11169876_11169967_11170047_11170249_11172980_11173124_11174472_11174693_11175901_11175990_11176577_11176818_11178344_11178448_11178552_11178721_11192830_11194043_11194474_11194591_11195555_11195821_11197484
H1_mix_00044976	chr19	-	5318	15	NNC	ENSG00000197256.11	novel	5183	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	67.6607684839356	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTCTGTGTCTTTTCTTT	11	True	NA	NA	False	AATAAA	-18	NA	11197530	11164269	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_11164711_11164738_11166612_11169876_11169967_11170047_11170249_11172980_11173124_11174472_11174693_11175901_11175990_11176577_11176818_11178344_11178448_11178552_11178721_11192830_11194043_11194474_11194591_11195621_11195821_11196049_11196228_11197484
H1_mix_00044978	chr19	-	5198	13	FSM	ENSG00000197256.11	ENST00000586659.6	5183	13	0	-15	0	15	multi-exon	FALSE	canonical	0	0	junction_12	58.8380545792149	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTTCGCTGTGCTCCC	-4	True	NA	NA	False	AATAAA	-33	NA	11197545	11164254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11166612_11169876_11169967_11170047_11170249_11172980_11173124_11174472_11174693_11175901_11175990_11176577_11176818_11178344_11178448_11178552_11178721_11192830_11194043_11194474_11194591_11195621_11195821_11197484
H1_mix_00044984	chr19	-	4390	27	NIC	ENSG00000130158.14	novel	4009	30	NA	NA	-726	1	combination_of_known_junctions	TRUE	canonical	3	86	junction_19	25.7950788848291	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCCATGTGGTGCGGTC	8203	False	NA	-6	True	TTTAAA	-19	NA	11230058	11199293	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_11199540_11200307_11200470_11200715_11200823_11200908_11201053_11201888_11202126_11202393_11202484_11202583_11202710_11204080_11204096_11204199_11204332_11208685_11208830_11208910_11209104_11211775_11211877_11211992_11212152_11213175_11213329_11214274_11214410_11214552_11214650_11215386_11215472_11215800_11215928_11216913_11217097_11217230_11217392_11221850_11222021_11222108_11222249_11222734_11222906_11222992_11223107_11227336_11227478_11228939_11229036_11229297
H1_mix_00044985	chr19	-	6586	50	NIC	ENSG00000130158.14	novel	6430	48	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	9	junction_27	35.8165765442754	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCCATGTGGTGCGGTC	-6	True	NA	-6	True	TTTAAA	-19	NA	11262481	11199293	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_11199540_11200307_11200470_11200715_11200823_11200908_11201053_11201888_11202126_11202393_11202484_11202583_11202710_11204080_11204096_11204199_11204332_11208685_11208830_11208910_11209104_11211775_11211877_11211992_11212152_11213175_11213329_11214274_11214410_11214552_11214650_11215386_11215472_11215800_11215928_11216913_11217097_11217230_11217392_11221850_11222021_11222108_11222249_11222734_11222906_11222992_11223107_11227336_11227478_11228939_11229036_11229297_11229391_11232184_11232290_11233202_11233367_11235597_11235760_11236345_11236578_11236792_11236880_11237455_11237558_11237640_11237780_11238044_11238116_11238186_11238305_11242044_11242208_11243058_11243153_11243257_11243386_11243556_11243711_11243801_11243883_11245562_11245713_11245811_11245879_11248065_11248152_11250873_11251087_11252118_11252249_11252481_11252551_11252782_11252959_11253638_11253727_11262396
H1_mix_00044986	chr19	-	4009	30	FSM	ENSG00000130158.14	ENST00000587656.5	4009	30	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_26	34.0715830350058	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCCACAAGGACCAAAGCTG	1764	False	NA	NA	False	NA	NA	NA	11236497	11199496	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11199540_11200307_11200470_11200715_11200823_11200908_11201053_11201888_11202126_11202393_11202484_11202583_11202710_11204080_11204096_11204199_11204332_11208685_11208830_11208910_11209104_11211775_11211877_11211992_11212152_11213175_11213329_11214274_11214410_11214552_11214650_11215386_11215472_11215800_11215928_11216913_11217097_11217230_11217392_11221850_11222021_11222108_11222249_11222734_11222906_11222992_11223107_11227336_11227478_11228939_11229036_11232184_11232290_11233202_11233367_11235597_11235760_11236345
H1_mix_00044989	chr19	-	5119	5	FSM	ENSG00000267174.6_ENSG00000105514.8	ENST00000222120.8	4240	5	0	-879	0	879	multi-exon	FALSE	canonical	3	126	junction_1	24.2009813850596	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTGTTTTTTTTTTTT	-34	True	NA	-1	True	ATTAAA	-22	NA	11339657	11321188	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11325586_11335446_11335572_11335664_11335784_11337171_11337461_11339468
H1_mix_00044990	chr19	-	1256	3	FSM	ENSG00000105518.14	ENST00000354882.10	1256	3	0	0	0	0	multi-exon	FALSE	canonical	3	724	junction_1	17	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGCTGTCTTTTTTTTT	14	True	NA	-4	True	AATAAA	-15	NA	11346268	11342777	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11343121_11345251_11345416_11345519
H1_mix_00044991	chr19	-	677	4	FSM	ENSG00000105518.14	ENST00000586590.5	677	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	310.494587535578	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGCTGTCTTTTTTTTT	14	True	NA	-4	True	AATAAA	-15	NA	11346268	11342777	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11343121_11345251_11345416_11345519_11345629_11346207
H1_mix_00044992	chr19	-	792	4	FSM	ENSG00000105518.14	ENST00000593256.6	792	4	0	0	0	0	multi-exon	TRUE	canonical	3	458	junction_3	134.127634073752	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTCTTTTTTTTTTC	-18	True	NA	-2	True	AATAAA	-17	NA	11346300	11342775	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11343121_11345251_11345416_11345519_11345629_11346126
H1_mix_00044993	chr19	-	916	4	FSM	ENSG00000105518.14	ENST00000447337.5	916	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	340.165972561761	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTCTTTTTTTTTTC	185	False	NA	-2	True	AATAAA	-17	NA	11346305	11342775	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11343121_11345251_11345416_11345519_11345629_11346007
H1_mix_00044994	chr19	-	840	4	FSM	ENSG00000105518.14	ENST00000588560.5	840	4	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_3	289.304145993259	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAAATGGCTGCTGTCTT	-7	True	NA	-11	True	AATAAA	-8	NA	11346248	11342784	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11343121_11345251_11345416_11345519_11345738_11346126
H1_mix_00044995	chr19	-	617	3	FSM	ENSG00000267277.2	ENST00000590399.2	687	3	0	70	0	-70	multi-exon	FALSE	canonical	0	0	junction_2	3.5	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCGGGACTACAGGTACGC	-14	True	NA	NA	False	NA	NA	NA	11374935	11368187	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11368296_11371687_11371872_11374610
H1_mix_00044996	chr19	-	2411	8	FSM	ENSG00000187266.14	ENST00000222139.11	2411	8	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_7	18.5736262435943	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATGTTCTAAGAAAGTAC	-1	True	NA	-29	True	AATAAA	-17	NA	11384314	11377206	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11378596_11378690_11378779_11380883_11380972_11381055_11381210_11381691_11381850_11381929_11382106_11383096_11383233_11384092
H1_mix_00044997	chr19	-	2086	7	FSM	ENSG00000187266.14	ENST00000592375.6	2086	7	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_6	15.0268278607148	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGTATGTTAAACAGCTC	1	True	NA	-30	True	NA	NA	NA	11384312	11377624	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11378779_11380883_11380972_11381055_11381210_11381691_11381850_11381929_11382106_11383096_11383233_11384092
H1_mix_00044998	chr19	-	2133	8	FSM	ENSG00000187266.14	ENST00000588681.5	2133	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_6	35.6124261734466	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTCTACCATGATTTCT	2	True	NA	NA	False	NA	NA	NA	11384342	11377762	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11378596_11378690_11378779_11380883_11380972_11381055_11381210_11381691_11381850_11381929_11382106_11382846_11383233_11384092
H1_mix_00045002	chr19	-	2366	20	FSM	ENSG00000205517.13	ENST00000563726.5	2366	20	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	63.4771754298663	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAAAAAACGTGTG	3	True	NA	NA	False	NA	NA	NA	11419310	11384511	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11384645_11397243_11397359_11397444_11397598_11399854_11399952_11400039_11400109_11400201_11400298_11402010_11402133_11402214_11402248_11402454_11402542_11402649_11402707_11405146_11405232_11405322_11405427_11406418_11406635_11406721_11406865_11411252_11411445_11415936_11416149_11416613_11416663_11416835_11417060_11418670_11418785_11419245
H1_mix_00045003	chr19	-	755	4	FSM	ENSG00000205517.13	ENST00000568628.5	747	4	0	-8	0	0	multi-exon	FALSE	canonical	0	0	junction_2	95.1034524434664	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGTCTTGTTTATTTTG	NA	False	NA	-1	True	NA	NA	NA	11397546	11394055	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11394521_11394605_11394679_11397243_11397359_11397444
H1_mix_00045004	chr19	-	2515	19	FSM	ENSG00000205517.13	ENST00000380456.8	2511	19	0	-4	0	0	multi-exon	FALSE	canonical	3	70	junction_18	33.2357831854557	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGTCTTGTTTATTTTG	-1	True	NA	-1	True	NA	NA	NA	11419314	11394055	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11394521_11397243_11397359_11397444_11397598_11399854_11399952_11400039_11400109_11400201_11400298_11402010_11402133_11402214_11402248_11402454_11402542_11402649_11402707_11405146_11405232_11405322_11405427_11406418_11406635_11406721_11406865_11415936_11416149_11416613_11416668_11416835_11417060_11418670_11418785_11419245
H1_mix_00045006	chr19	-	2488	19	NIC	ENSG00000205517.13	novel	2511	19	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_16	45.2383263708938	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGTCAGTCTTGTTTAT	-1	True	NA	-5	True	NA	NA	NA	11419296	11394059	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_11394521_11397243_11397359_11397444_11397598_11399854_11399952_11400039_11400109_11400201_11400298_11402010_11402133_11402214_11402248_11402454_11402542_11402649_11402707_11405146_11405232_11405322_11405427_11406418_11406635_11406721_11406865_11415936_11416149_11416613_11416663_11416835_11417060_11418670_11418785_11419245
H1_mix_00045007	chr19	-	2560	19	NIC	ENSG00000205517.13	novel	2511	19	NA	NA	-22	0	combination_of_known_junctions	TRUE	canonical	3	7	junction_16	52.6275053654233	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGTCAGTCTTGTTTAT	2503	False	NA	-5	True	NA	NA	NA	11419350	11394059	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_11394521_11397243_11397359_11397444_11397598_11399854_11399970_11400039_11400109_11400201_11400298_11402010_11402133_11402214_11402248_11402454_11402542_11402649_11402707_11405146_11405232_11405322_11405427_11406418_11406635_11406721_11406865_11415936_11416149_11416613_11416663_11416835_11417060_11418670_11418785_11419245
H1_mix_00045011	chr19	-	689	3	ISM	ENSG00000198003.12	ENST00000356392.9	2123	13	13255	-71	13033	70	3prime_fragment	FALSE	canonical	3	67	junction_2	12	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGCCTCCTCCAACCTG	-13	True	NA	63	True	NA	NA	NA	11421866	11420533	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_11420948_11421127_11421213_11421676
H1_mix_00045013	chr19	-	2191	9	FSM	ENSG00000161914.10	ENST00000293771.10	2154	9	-28	-9	-28	7	multi-exon	TRUE	canonical	2	13	junction_5	6.42139976952066	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTAGGCCTGAATGATTT	NA	False	NA	-2	True	ATTAAA	-23	NA	11505867	11483419	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11483860_11484041_11484142_11485655_11485771_11486768_11486881_11486986_11487159_11487291_11487904_11495949_11496166_11498295_11498340_11505487
H1_mix_00045014	chr19	-	1663	8	FSM	ENSG00000130159.15	ENST00000270517.12	1647	8	0	-16	0	16	multi-exon	FALSE	canonical	3	215	junction_5	31.5588210120953	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTCTCCTTTTGGCGCCC	3	True	NA	3	True	AAAAAG	-44	NA	11529134	11505912	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11506429_11507456_11507563_11507701_11507851_11507990_11508049_11513055_11513280_11513803_11514222_11519074_11519194_11529061
H1_mix_00045016	chr19	-	970	6	FSM	ENSG00000130159.15	ENST00000417981.6	970	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	104.803435058208	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGAATCTGCAGGCGCCT	6945	False	NA	-86	True	NA	NA	NA	11529172	11506001	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11506429_11507456_11507563_11507701_11507851_11507990_11508049_11519074_11519194_11529061
H1_mix_00045017	chr19	-	1026	4	FSM	ENSG00000130165.10	ENST00000252445.7	1019	4	0	-7	0	7	multi-exon	FALSE	canonical	3	577	junction_3	78.661016746261	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGATGTCTTGGGTTCT	-3	True	NA	-6	True	AATAAA	-25	NA	11559236	11553035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11553811_11554010_11554082_11554231_11554366_11559190
H1_mix_00045018	chr19	-	1630	7	FSM	ENSG00000102575.13	ENST00000218758.9	1630	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	8.09835374217089	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGCCACTGGTGTGTTA	1751	False	NA	-6	True	AATAAA	-22	NA	11578985	11574659	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11575253_11576242_11576589_11576715_11576844_11577056_11577318_11577592_11577680_11578584_11578658_11578843
H1_mix_00045019	chr19	-	1508	6	FSM	ENSG00000102575.13	ENST00000412435.6	1527	6	19	0	9	0	multi-exon	FALSE	canonical	2	8	junction_5	9.55824251627882	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTCAATAAAAGAATAGTTG	-7	True	NA	-37	True	NA	NA	NA	11578967	11574690	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11575253_11576242_11576589_11576715_11576844_11577056_11577318_11577592_11577680_11578843
H1_mix_00045020	chr19	-	962	1	FSM	ENSG00000214223.4	ENST00000444945.1	962	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	171	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGGAAACAAAGCTTAGCA	57	False	NA	NA	False	NA	NA	NA	11667030	11666068	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11666100_11667000
H1_mix_00045022	chr19	-	2901	3	FSM	ENSG00000197647.13	ENST00000478765.6	2524	3	-346	-31	-346	30	multi-exon	FALSE	canonical	3	26	junction_1	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCATCTGCTGGGCAGC	NA	False	NA	27	True	NA	NA	NA	12019023	12014684	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12016667_12017875_12017937_12018165
H1_mix_00045025	chr19	-	1756	4	FSM	ENSG00000257446.4	ENST00000547628.2	1756	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	1.69967317119759	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTCTATGGATGTAAGCA	7	True	NA	NA	False	NA	NA	NA	12052961	12043804	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12045210_12046367_12046429_12046633_12046761_12052798
H1_mix_00045026	chr19	-	3622	4	FSM	ENSG00000132010.16	ENST00000334213.10	3004	4	-93	-525	-88	-340	multi-exon	FALSE	canonical	3	41	junction_3	3.39934634239519	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAACCCTGATATATTCC	3495	False	NA	NA	False	NA	NA	NA	12140443	12130824	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12133986_12135499_12135561_12135768_12135905_12140179
H1_mix_00045028	chr19	-	1767	1	FSM	ENSG00000242615.1	ENST00000472362.1	1517	1	-364	114	-364	-114	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTCTATCTTGTTTTTT	252	False	NA	NA	False	NA	NA	NA	12143686	12141919	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12141900_12143700
H1_mix_00045029	chr19	-	1967	5	NIC	ENSG00000213297.8	novel	1532	6	NA	NA	13	-1871	intron_retention	FALSE	canonical	1	4	junction_1	14.9164338901763	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTCTTTTAGATTACT	11	True	NA	-2	True	AATAAA	-17	NA	12156718	12142087	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_12142737_12145257_12146225_12147394_12147456_12147675_12147803_12156555
H1_mix_00045030	chr19	-	1581	4	FSM	ENSG00000257591.6	ENST00000439556.3	1702	4	0	121	0	-121	multi-exon	FALSE	canonical	3	18	junction_1	10.0332779621949	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTGCAGTGGCTCATGCC	-5	True	NA	NA	False	CATAAA	-19	NA	12156734	12145010	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12146225_12147394_12147456_12147675_12147803_12156555
H1_mix_00045031	chr19	-	2631	4	FSM	ENSG00000197857.15	ENST00000355684.6	2636	4	0	5	0	-5	multi-exon	FALSE	canonical	3	19	junction_1	3.29983164553722	489	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGCTGTGTACATAGTT	0	True	NA	-6	True	ATTAAA	-16	NA	12294883	12271812	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12274064_12274972_12275034_12275955_12276083_12294691
H1_mix_00045032	chr19	-	2458	4	FSM	ENSG00000188868.14	ENST00000293725.10	2699	4	0	241	0	-241	multi-exon	FALSE	canonical	3	9	junction_3	3.74165738677394	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCTGGGCATACATAAATC	0	True	NA	NA	False	AATACA	-39	NA	12333633	12317717	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12319834_12321271_12321333_12322584_12322712_12333479
H1_mix_00045034	chr19	-	1906	3	FSM	ENSG00000198342.10	ENST00000438182.5	1906	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTATCCCCTAACCATATG	0	True	NA	NA	False	NA	NA	NA	12365641	12349582	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12351319_12352009_12352071_12365532
H1_mix_00045035	chr19	-	2572	4	FSM	ENSG00000196466.10	ENST00000430385.3	2583	4	11	0	8	0	multi-exon	FALSE	canonical	3	21	junction_3	4.32049379893857	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTGCTTTTGTTTAATG	4	True	NA	-1	True	ATTAAA	-22	NA	12401260	12390015	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12392207_12392602_12392664_12393296_12393424_12401067
H1_mix_00045036	chr19	-	2577	4	FSM	ENSG00000180855.16	ENST00000301547.10	2573	4	0	-4	0	4	multi-exon	FALSE	canonical	3	35	junction_2	2.16024689946929	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCTGTTTAATGTGTT	0	True	NA	NA	False	ATTAAA	-26	NA	12441021	12429701	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12431981_12432376_12432438_12433070_12433198_12440911
H1_mix_00045037	chr19	-	4891	4	FSM	ENSG00000242852.7	ENST00000397732.8	4897	4	2	4	2	-4	multi-exon	FALSE	canonical	3	10	junction_1	0.816496580927726	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGATTTTCAGATTAAGT	-17	True	NA	NA	False	ATTAAA	-16	NA	12484814	12461187	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12465734_12466461_12466520_12466723_12466851_12484654
H1_mix_00045038	chr19	-	2885	4	FSM	ENSG00000249709.8	ENST00000339282.12	2885	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	3.29983164553722	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGCATTTCCATTTCT	-21	True	NA	NA	False	ATTAAA	-17	NA	12551482	12525372	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12527917_12528303_12528365_12528569_12528697_12551329
H1_mix_00045039	chr19	-	6397	6	FSM	ENSG00000269693.1_ENSG00000188033.10	ENST00000414906.5	996	6	-35	-5366	-25	159	multi-exon	FALSE	canonical	3	6	junction_4	7.83326241102646	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACTGATCAATTTCCATA	123	False	NA	43	True	NA	NA	NA	12610838	12575940	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12581725_12582849_12582911_12583429_12583557_12609157_12609203_12609869_12609975_12610563
H1_mix_00045040	chr19	-	6108	5	FSM	ENSG00000188033.10	ENST00000311437.11	6108	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	7.88986691902975	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATTGAGTTTTTCAT	1	True	NA	0	True	ATTAAA	-23	NA	12610813	12576099	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12581725_12582849_12582911_12583429_12583557_12609157_12609203_12610563
H1_mix_00045041	chr19	-	786	2	NNC	ENSG00000269242.1	novel	838	5	NA	NA	4437	28944	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCAGTGGCTCACACCTGT	-4	True	NA	NA	False	AAAAAG	-6	NA	12643960	12614886	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_12614928_12643215
H1_mix_00045042	chr19	-	799	2	NNC	ENSG00000269242.1	novel	838	5	NA	NA	4427	28938	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGGACGCAGTGGCTCAC	3620	False	NA	NA	False	NA	NA	NA	12643970	12614892	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_12614928_12643206
H1_mix_00045043	chr19	-	789	2	NNC	ENSG00000269242.1	novel	838	5	NA	NA	4427	28938	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGGACGCAGTGGCTCAC	3620	False	NA	NA	False	NA	NA	NA	12643970	12614892	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_12614927_12643215
H1_mix_00045047	chr19	-	599	4	FSM	ENSG00000105583.11	ENST00000222190.9	599	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	837.778544060952	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGTCAGCCTCTTCTGT	13	True	NA	-22	True	AATAAA	-12	NA	12669403	12668074	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12668426_12668519_12668612_12669127_12669234_12669353
H1_mix_00045048	chr19	-	1095	8	FSM	ENSG00000095059.17	ENST00000351660.9	1090	8	0	-5	0	0	multi-exon	FALSE	canonical	3	32	junction_2	129.978020119887	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTGTCTCGGTCCTTG	124	False	NA	-2	True	NA	NA	NA	12681771	12675716	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12675934_12676016_12676106_12677290_12677397_12679456_12679544_12679622_12679720_12679800_12679923_12680160_12680326_12681559
H1_mix_00045049	chr19	-	1345	9	FSM	ENSG00000095059.17	ENST00000210060.12	1345	9	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_2	53.9801757592544	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTGTCTCGGTCCTTG	15	False	12681895	-2	True	NA	NA	NA	12681880	12675716	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12675934_12676016_12676143_12677107_12677212_12677290_12677397_12679456_12679544_12679622_12679720_12679800_12679923_12680160_12680326_12681559
H1_mix_00045050	chr19	-	1167	9	FSM	ENSG00000095059.17	ENST00000594424.5	1172	9	5	0	5	0	multi-exon	FALSE	canonical	3	16	junction_8	128.243664560866	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGATGGTATCTGAAGTC	694	False	NA	-28	True	NA	NA	NA	12681201	12675742	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12675934_12676016_12676143_12677107_12677212_12677290_12677397_12679456_12679544_12679622_12679720_12679800_12679923_12680160_12680326_12681032
H1_mix_00045051	chr19	-	898	7	FSM	ENSG00000095059.17	ENST00000595912.5	895	7	0	-3	0	0	multi-exon	FALSE	canonical	3	11	junction_5	132.498637309555	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATCATTCTGGGCGGGGG	-4	True	NA	NA	False	NA	NA	NA	12681868	12677164	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12677212_12677290_12677397_12679456_12679544_12679622_12679720_12679800_12679923_12680195_12680326_12681559
H1_mix_00045052	chr19	-	1728	10	FSM	ENSG00000132004.13	ENST00000393261.8	1727	10	0	-1	0	1	multi-exon	FALSE	canonical	3	128	junction_6	16.0030861221234	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGTGTGAGTGTGGTTT	0	True	NA	-5	True	AATAAA	-23	NA	12696631	12688914	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12689291_12689371_12689438_12689540_12689631_12689760_12689875_12689961_12690111_12691165_12691258_12691341_12691455_12694593_12694723_12694798_12694939_12696172
H1_mix_00045053	chr19	-	4789	25	NIC	ENSG00000105576.16	novel	4962	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_8	25.1047804212664	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTAGTCTGTGGCTTCC	6	True	NA	-10	True	AGTAAA	-18	NA	12722525	12699200	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_12701244_12701325_12701454_12701597_12701673_12701751_12701852_12702071_12702148_12702822_12702919_12703427_12703527_12703713_12703802_12705239_12705399_12705491_12705600_12705681_12705769_12706195_12706368_12706569_12706796_12710620_12710774_12711295_12711462_12711552_12711614_12714820_12714940_12715046_12715170_12715242_12715325_12715404_12715539_12715632_12715740_12719028_12719179_12719260_12719337_12720878_12720991_12722476
H1_mix_00045054	chr19	-	5010	26	NIC	ENSG00000105576.16	novel	5051	26	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_25	28.8076101056648	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTAGTCTGTGGCTTCC	7469	False	NA	-10	True	AGTAAA	-18	NA	12723921	12699200	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_12701244_12701325_12701454_12701597_12701673_12701751_12701852_12702071_12702148_12702822_12702919_12703427_12703527_12703713_12703802_12705239_12705399_12705491_12705600_12705681_12705769_12706195_12706368_12706569_12706796_12710620_12710774_12711295_12711462_12711552_12711614_12714820_12714940_12715046_12715170_12715242_12715325_12715404_12715539_12715632_12715740_12719028_12719179_12719260_12719337_12720878_12720991_12723248_12723366_12723768
H1_mix_00045056	chr19	-	3035	25	FSM	ENSG00000105576.16	ENST00000588216.5	3056	25	21	0	21	0	multi-exon	FALSE	canonical	2	5	junction_24	29.4008456038635	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAGGAGACTGCAGCTGG	-32	True	NA	NA	False	NA	NA	NA	12723990	12701326	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12701454_12701597_12701673_12701751_12701852_12702071_12702148_12702822_12702919_12703427_12703527_12703713_12703802_12705239_12705399_12705491_12705600_12705681_12705769_12706195_12706368_12706569_12706796_12710620_12710774_12711295_12711462_12711552_12711614_12714820_12714940_12715046_12715170_12715242_12715325_12715404_12715539_12715632_12715740_12719028_12719179_12719260_12719337_12720878_12720991_12723248_12723366_12723768
H1_mix_00045059	chr19	-	879	3	FSM	ENSG00000123144.11	ENST00000242784.5	879	3	0	0	0	0	multi-exon	FALSE	canonical	3	1262	junction_2	570.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGCTTGGTTTGTCT	-12	True	NA	-7	True	AGTAAA	-21	NA	12734684	12730639	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12731069_12731343_12731422_12734312
H1_mix_00045060	chr19	-	2560	22	FSM	ENSG00000095066.12	ENST00000264827.9	2603	22	43	0	-5	0	multi-exon	FALSE	canonical	3	354	junction_6	79.4863898274444	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTGTGCTCTGGGCA	9156	False	NA	-28	True	AATAAA	-14	NA	12775577	12763003	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12763432_12763527_12763600_12763667_12763779_12764813_12764918_12764998_12765082_12765689_12765725_12765926_12766015_12766102_12766241_12767394_12767465_12767815_12767904_12768012_12768124_12769880_12770083_12770931_12771073_12771158_12771320_12771396_12771478_12772189_12772253_12772612_12772681_12772779_12772913_12772993_12773045_12774668_12774742_12774811_12774898_12775404
H1_mix_00045065	chr19	-	1114	2	FSM	ENSG00000095066.12	ENST00000592808.1	1114	2	0	0	0	0	multi-exon	FALSE	canonical	3	677	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATAGGGAATAGCAGATGT	-29	True	NA	NA	False	NA	NA	NA	12775572	12773951	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12774898_12775404
H1_mix_00045066	chr19	-	890	3	FSM	ENSG00000095066.12	ENST00000589134.5	890	3	0	0	0	0	multi-exon	FALSE	canonical	3	631	junction_1	23	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCCAGTAGTTCTGTGA	-1	True	NA	NA	False	AAAAAG	-29	NA	12775544	12774077	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12774742_12774811_12774898_12775404
H1_mix_00045069	chr19	-	789	5	FSM	ENSG00000167815.12	ENST00000334482.9	784	5	0	-5	0	5	multi-exon	FALSE	canonical	3	300	junction_1	3486.44047525553	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGTGTGCTCTGTCCTT	92	False	NA	-1	True	AATAAA	-25	NA	12801787	12796814	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12797167_12800176_12800300_12800915_12801070_12801158_12801271_12801739
H1_mix_00045070	chr19	-	1725	4	FSM	ENSG00000167815.12	ENST00000466174.5	1717	4	0	-8	0	5	multi-exon	FALSE	canonical	3	8033	junction_3	364.981582488152	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGTGTGCTCTGTCCTT	90	False	NA	-1	True	AATAAA	-25	NA	12801789	12796814	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12797167_12799858_12801070_12801158_12801271_12801739
H1_mix_00045071	chr19	-	933	6	FSM	ENSG00000167815.12	ENST00000301522.3	925	6	0	-8	0	5	multi-exon	FALSE	canonical	3	8033	junction_5	530.593629814758	1384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGTGTGCTCTGTCCTT	0	True	NA	-1	True	AATAAA	-25	NA	12801800	12796814	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12797167_12799858_12799990_12800176_12800300_12800915_12801070_12801158_12801271_12801739
H1_mix_00045072	chr19	-	505	2	FSM	ENSG00000167815.12	ENST00000498785.1	505	2	0	0	0	0	multi-exon	FALSE	canonical	3	9361	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCCCGTCTCTACGAAGA	12	True	NA	NA	False	NA	NA	NA	12800247	12799555	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12799990_12800176
H1_mix_00045073	chr19	-	699	4	FSM	ENSG00000167815.12	ENST00000477555.1	699	4	0	0	0	0	multi-exon	FALSE	canonical	3	8033	junction_3	369.158803527997	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGAGGCTCTGCGGCTG	91	False	NA	NA	False	NA	NA	NA	12801788	12799915	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12800300_12800915_12801070_12801158_12801271_12801739
H1_mix_00045074	chr19	-	1023	6	FSM	ENSG00000132026.15	ENST00000674343.2	1023	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	6.58483105326173	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGACGAGTGTGGCTGCTT	-2	True	NA	-5	True	AATAAA	-17	NA	12834579	12825481	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12825934_12826774_12826872_12828656_12828768_12828868_12828954_12829810_12829998_12834488
H1_mix_00045075	chr19	-	1938	6	FSM	ENSG00000105612.9	ENST00000222219.8	1938	6	0	0	0	0	multi-exon	TRUE	canonical	3	221	junction_2	27.1116211245289	184	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGCTGTTAACCTTCTCT	-5	True	NA	-4	True	AATAAA	-15	NA	12881449	12875208	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12876364_12878381_12878580_12878669_12878835_12880801_12880881_12880971_12881153_12881289
H1_mix_00045078	chr19	-	1609	6	FSM	ENSG00000161860.8	ENST00000293695.8	1248	6	0	-361	0	361	multi-exon	FALSE	canonical	3	19	junction_5	1.93907194296653	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTCATACCTCCCTCTAT	-14	True	NA	NA	False	NA	NA	NA	12919293	12898424	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12899386_12900003_12900121_12900459_12900649_12904491_12904667_12918221_12918338_12919242
H1_mix_00045080	chr19	-	1720	12	FSM	ENSG00000179115.11	ENST00000423140.6	1720	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_8	314.153486727651	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGGTGGCTTTCCTTAGG	0	True	NA	-20	True	AATAAA	-17	NA	12933714	12922479	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12922887_12924150_12924266_12924448_12924527_12924638_12924808_12924903_12925004_12925089_12925175_12928341_12928458_12928534_12928664_12930222_12930342_12930428_12930528_12930611_12930750_12933549
H1_mix_00045081	chr19	-	1769	2	FSM	ENSG00000179271.3	ENST00000316939.3	1769	2	0	0	0	0	multi-exon	FALSE	canonical	3	2286	junction_1	0	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTCTTTTATAAAACTT	-5	True	NA	NA	False	AATAAA	-17	NA	12957223	12953118	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12954527_12956862
H1_mix_00045082	chr19	-	1482	4	FSM	ENSG00000104903.5	ENST00000264824.5	1481	4	0	-1	0	1	multi-exon	FALSE	canonical	0	0	junction_2	1.24721912892465	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTGGTGCCTCATTTTT	2	True	NA	-2	True	NA	NA	NA	13102858	13099031	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13099735_13100656_13100749_13100836_13101196_13102530
H1_mix_00045083	chr19	-	2265	16	FSM	ENSG00000104907.13	ENST00000437766.5	2263	16	0	-2	0	2	multi-exon	FALSE	canonical	3	315	junction_8	53.0821585427303	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGTTTGTGTATTG	89	False	NA	-4	True	AATAAA	-27	NA	13116649	13104899	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13105082_13105266_13105397_13105486_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13109914_13110002_13110157_13110307_13112704_13112818_13112895_13113012_13115278_13115467_13115625_13115769_13115996_13116053_13116145
H1_mix_00045084	chr19	-	2186	15	FSM	ENSG00000104907.13	ENST00000221504.12	2179	15	0	-7	0	2	multi-exon	FALSE	canonical	3	45	junction_8	103.953408912309	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGTTTGTGTATTG	81	False	NA	-4	True	AATAAA	-27	NA	13116657	13104899	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13105082_13105266_13105397_13105486_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13110157_13110307_13112704_13112818_13112895_13113012_13115278_13115467_13115625_13115769_13115996_13116053_13116145
H1_mix_00045085	chr19	-	2134	16	FSM	ENSG00000104907.13	ENST00000593157.5	2127	16	0	-7	0	2	multi-exon	FALSE	canonical	3	30	junction_15	104.989438622283	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGTTTGTGTATTG	-2	True	NA	-4	True	AATAAA	-27	NA	13116740	13104899	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13105082_13105266_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13109914_13110002_13110157_13110307_13112704_13112818_13112895_13113012_13115278_13115467_13115625_13115769_13115996_13116053_13116145_13116341_13116652
H1_mix_00045086	chr19	-	2586	18	FSM	ENSG00000104907.13	ENST00000592062.5	2579	18	0	-7	0	2	multi-exon	FALSE	canonical	2	2	junction_17	105.533379163405	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGTTTGTGTATTG	NA	False	NA	-4	True	AATAAA	-27	NA	13117567	13104899	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13105082_13105266_13105397_13105486_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13109914_13110002_13110157_13110307_13112704_13112818_13112895_13113012_13115278_13115467_13115625_13115769_13115996_13116053_13116145_13116432_13116652_13117113_13117488
H1_mix_00045087	chr19	-	2132	17	FSM	ENSG00000104907.13	ENST00000357720.9	2128	17	0	-4	0	-1	multi-exon	FALSE	canonical	3	315	junction_8	51.4180172702138	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGCCTGTGGTTTGTGTA	-2	True	NA	-7	True	AATAAA	-24	NA	13116740	13104902	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13105082_13105266_13105397_13105486_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13109914_13110002_13110157_13110307_13112704_13112818_13112895_13113012_13115278_13115467_13115625_13115769_13115996_13116053_13116145_13116432_13116652
H1_mix_00045088	chr19	-	2251	15	FSM	ENSG00000104907.13	ENST00000588511.5	2251	15	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_10	106.148553010027	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAACCAATAAAGAGATGT	13	True	NA	-43	True	GGGGCT	-21	NA	13116725	13104938	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13105082_13105266_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13109914_13110002_13110157_13110307_13112704_13112818_13112908_13113012_13115278_13115467_13115625_13115769_13115996_13116432_13116652
H1_mix_00045093	chr19	-	1302	8	FSM	ENSG00000104915.15	ENST00000587230.6	1304	8	2	0	2	0	multi-exon	FALSE	canonical	0	0	junction_6	153.332904465535	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTCGTGTGGTGTGTG	-2	True	NA	-1	True	AATAAA	-23	NA	13150373	13144057	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13144487_13144576_13144672_13144763_13144871_13145287_13145396_13149028_13149092_13149498_13149594_13149727_13149898_13150138
H1_mix_00045094	chr19	-	1505	7	ISM	ENSG00000104915.15	ENST00000587230.6	1304	8	36	4	2	0	intron_retention	FALSE	canonical	0	0	junction_6	161.099003376461	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTATTTGTGTCGTGTGGTG	4665	False	NA	-5	True	AATAAA	-19	NA	13150339	13144061	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_13144487_13144576_13144672_13144763_13144871_13145287_13145396_13149028_13149092_13149498_13149594_13149727
H1_mix_00045096	chr19	-	1164	5	FSM	ENSG00000104915.15	ENST00000588848.5	1164	5	0	0	0	0	multi-exon	FALSE	canonical	3	430	junction_4	6.72681202353685	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAGTATCCCACATGACG	-11	True	NA	NA	False	NA	NA	NA	13150313	13144600	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13144672_13144763_13144871_13145287_13145396_13149028_13149092_13149498
H1_mix_00045100	chr19	-	708	6	FSM	ENSG00000141837.22	ENST00000637832.1	701	6	0	-7	0	7	multi-exon	FALSE	canonical	1	1	junction_1	1.6	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCTCTCTCTCTCTCTAA	6194	False	NA	NA	False	AATATA	-25	NA	13235674	13228609	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13228796_13230081_13230210_13231709_13231861_13234920_13235037_13235208_13235275_13235613
H1_mix_00045101	chr19	-	2594	1	FSM	ENSG00000141837.22	ENST00000637168.1	2979	1	-118	503	-118	-436	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAGACCCCATCTCTACT	NA	False	NA	NA	False	NA	NA	NA	13259284	13256690	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13256700_13259300
H1_mix_00045103	chr19	-	1899	5	FSM	ENSG00000141837.22	ENST00000635786.1	2840	5	0	941	0	-501	multi-exon	FALSE	canonical	3	7	junction_3	1.11803398874989	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTAGGCTCCCTCCTGAG	386	False	NA	NA	False	GGGGCT	-17	NA	13286554	13274438	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13275957_13277068_13277129_13283266_13283397_13285067_13285207_13286502
H1_mix_00045104	chr19	-	1255	3	FSM	ENSG00000141837.22	ENST00000592864.3	1623	3	368	0	368	0	multi-exon	FALSE	canonical	0	0	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTGGTCAGTTTGAGAA	1	True	NA	NA	False	NA	NA	NA	13624121	13518796	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13519504_13599752_13600057_13623877
H1_mix_00045105	chr19	-	10731	1	FSM	ENSG00000267519.6	ENST00000587762.2	19049	1	6642	1676	6642	-1676	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCCTGGGTGAAGGGCG	1	True	NA	NA	False	NA	NA	NA	13836286	13825555	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13825600_13836300
H1_mix_00045107	chr19	-	3756	19	ISM	ENSG00000132005.9	ENST00000254325.9	4375	21	22747	8	-19518	-8	3prime_fragment	FALSE	canonical	0	0	junction_4	4.41133500691229	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTACTGCTGACTCGC	3006	False	NA	-14	True	AATAAA	-14	NA	13983573	13961537	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_13962865_13962993_13963040_13963121_13963276_13963537_13963747_13963857_13964008_13965448_13965547_13965625_13965778_13966420_13966531_13966632_13966752_13968564_13968681_13968774_13968895_13969993_13970176_13972742_13973128_13977991_13978087_13979446_13979543_13980572_13980690_13982120_13982229_13983186_13983271_13983485
H1_mix_00045108	chr19	-	2424	5	FSM	ENSG00000187867.10	ENST00000589048.2	2383	5	-40	-1	-40	1	multi-exon	FALSE	canonical	3	40	junction_4	4.7169905660283	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGCTTGAATGTGTGTGTA	-3	True	NA	-23	True	AATAAA	-18	NA	14057639	14053365	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14055227_14055379_14055426_14056428_14056514_14056661_14056805_14057350
H1_mix_00045109	chr19	-	2209	5	FSM	ENSG00000141858.12	ENST00000533683.7	2196	5	0	-13	0	13	multi-exon	FALSE	canonical	3	468	junction_4	47.9635278102018	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGGAGTCCATTTTATGAA	-16	True	NA	-1	True	AATAAA	-32	NA	14090751	14087837	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14088576_14088670_14088783_14088879_14088977_14089067_14089363_14089784
H1_mix_00045111	chr19	-	2696	10	FSM	ENSG00000072062.15	ENST00000308677.9	2695	10	0	-1	0	1	multi-exon	FALSE	canonical	3	57	junction_2	8.34147750183265	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGCTGGTGTTCTCGACT	-13	True	NA	0	True	AATAAA	-20	NA	14117762	14091686	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14093238_14093627_14093793_14097360_14097484_14097578_14097675_14097763_14097891_14100825_14100909_14102815_14102915_14106759_14106889_14107347_14107410_14117501
H1_mix_00045112	chr19	-	2498	9	NIC	ENSG00000072062.15	novel	2695	10	NA	NA	-2	-4	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	21.8599948536133	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTGTCGCTGGTGTTCT	15	True	NA	-5	True	AATAAA	-15	NA	14117734	14091691	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_14093238_14097360_14097484_14097578_14097675_14097763_14097891_14100825_14100909_14102815_14102915_14106759_14106889_14107347_14107410_14117501
H1_mix_00045115	chr19	-	9166	21	NIC	ENSG00000072071.17	novel	7853	24	NA	NA	-647	6	intron_retention	FALSE	canonical	3	89	junction_17	31.3856655178761	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGGTGTGACTTCTTGAG	13	False	NA	0	True	AATAAA	-27	NA	14206834	14147736	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_14152438_14152516_14152614_14152783_14152913_14155358_14155528_14156109_14156202_14156657_14156725_14156924_14157146_14157250_14157461_14157881_14158053_14158337_14158553_14159089_14159216_14159400_14159585_14159734_14159774_14160111_14160298_14160592_14160697_14161311_14161627_14162605_14163407_14170681_14170792_14177530_14177745_14183532_14183698_14205984
H1_mix_00045116	chr19	-	8563	23	NIC	ENSG00000072071.17	novel	7853	24	NA	NA	-647	6	combination_of_known_junctions	FALSE	canonical	3	37	junction_2	37.7151404369892	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGGTGTGACTTCTTGAG	13	False	NA	0	True	AATAAA	-27	NA	14206834	14147736	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_14151616_14152132_14152223_14152308_14152438_14152516_14152614_14152783_14152913_14155358_14155528_14156109_14156202_14156657_14156725_14156924_14157146_14157250_14157461_14157881_14158053_14158337_14158553_14159089_14159216_14159400_14159585_14159734_14159774_14160111_14160298_14160592_14160697_14161311_14161627_14162605_14163407_14170681_14170792_14177530_14177745_14183532_14183698_14205984
H1_mix_00045117	chr19	-	8576	24	NIC	ENSG00000072071.17	novel	7853	24	NA	NA	-647	6	combination_of_known_splicesites	FALSE	canonical	3	26	junction_20	43.081186820293	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGGTGTGACTTCTTGAG	13	False	NA	0	True	AATAAA	-27	NA	14206834	14147736	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_14151616_14152132_14152151_14152308_14152438_14152516_14152614_14152783_14152913_14155358_14155528_14156109_14156202_14156657_14156725_14156924_14157146_14157250_14157461_14157881_14158053_14158337_14158553_14159089_14159216_14159400_14159585_14159734_14159774_14160111_14160298_14160592_14160697_14161311_14161627_14162605_14163407_14164620_14164706_14170681_14170792_14177530_14177745_14183532_14183698_14205984
H1_mix_00045118	chr19	-	8637	25	NNC	ENSG00000072071.17	novel	7853	24	NA	NA	-647	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	63.583934029491	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGGTGTGACTTCTTGAG	13	False	NA	0	True	AATAAA	-27	NA	14206834	14147736	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_14151616_14152132_14152151_14152308_14152438_14152516_14152614_14152783_14152913_14155358_14155528_14156109_14156202_14156657_14156725_14156924_14157146_14157250_14157461_14157881_14158053_14158337_14158553_14159089_14159216_14159400_14159585_14159734_14159774_14160111_14160298_14160592_14160697_14161311_14161627_14162584_14163407_14167015_14167031_14170681_14170792_14177530_14177745_14183532_14183698_14189579_14189690_14205984
H1_mix_00045119	chr19	-	6274	23	FSM	ENSG00000072071.17	ENST00000361434.8	7820	23	-664	2210	-646	1216	multi-exon	FALSE	canonical	3	89	junction_19	30.3803710008413	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAAAAAAGACAAAAA	14	False	NA	6	True	NA	NA	NA	14206833	14149952	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14151616_14152132_14152151_14152308_14152438_14152516_14152614_14152783_14152913_14155358_14155528_14156109_14156202_14156657_14156725_14156924_14157146_14157250_14157461_14157881_14158053_14158337_14158553_14159089_14159216_14159400_14159585_14159734_14159774_14160111_14160298_14160592_14160697_14161311_14161627_14162605_14163407_14170681_14170792_14177530_14177745_14183532_14183698_14205984
H1_mix_00045122	chr19	-	2251	5	ISM	ENSG00000072071.17	ENST00000361434.8	7820	23	-627	14714	-609	491	5prime_fragment	FALSE	canonical	3	89	junction_1	37.2458051329274	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAAGCACTTCACAGTCA	51	False	NA	-24	True	NA	NA	NA	14206796	14162456	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_14163407_14170681_14170792_14177530_14177745_14183532_14183698_14205984
H1_mix_00045124	chr19	-	1499	11	FSM	ENSG00000123136.15	ENST00000242776.9	1498	11	0	-1	0	1	multi-exon	FALSE	canonical	3	913	junction_6	51.4800932400088	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGGTCATCTTGGCCTT	7	True	NA	1	True	AATAAA	-38	NA	14419341	14408796	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14408953_14409036_14409185_14409302_14409448_14409535_14409646_14409741_14409874_14410215_14410335_14410988_14411173_14411505_14411599_14412550_14412679_14413012_14413225_14419269
H1_mix_00045125	chr19	-	1813	4	FSM	ENSG00000123136.15	ENST00000587730.5	1813	4	0	0	0	0	multi-exon	FALSE	canonical	3	1069	junction_3	22.0151463012778	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCTCCCACCCCATCT	8451	False	NA	-21	True	AATAAA	-16	NA	14410929	14408818	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14408953_14409036_14409185_14409302_14409646_14409741
H1_mix_00045126	chr19	-	1903	9	FSM	ENSG00000123136.15	ENST00000589318.5	1903	9	0	0	0	0	multi-exon	FALSE	canonical	3	913	junction_4	57.2407197718547	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCTCCCACCCCATCT	11	True	NA	-21	True	AATAAA	-16	NA	14419337	14408818	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14408953_14409036_14409185_14409302_14409646_14409741_14410335_14410988_14411173_14411505_14411599_14412550_14412679_14413012_14413225_14419269
H1_mix_00045132	chr19	-	988	4	FSM	ENSG00000123136.15	ENST00000590260.5	988	4	0	0	0	0	multi-exon	FALSE	canonical	3	1003	junction_1	19.9555060627944	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGGAGCTTCAGCCTAAA	0	True	NA	NA	False	NA	NA	NA	14419380	14411061	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14411599_14412550_14412679_14413012_14413225_14419269
H1_mix_00045135	chr19	-	1924	9	FSM	ENSG00000123159.16	ENST00000393033.9	1921	9	0	-3	0	1	multi-exon	FALSE	canonical	3	337	junction_8	197.919135949508	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGGCTTCGGGGTGG	-12	True	NA	0	True	CATAAA	-20	NA	14496127	14477758	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14478568_14478683_14478766_14479411_14479525_14480304_14480486_14480592_14480779_14482688_14483007_14491655_14491744_14492856_14492913_14496036
H1_mix_00045136	chr19	-	1785	7	FSM	ENSG00000123159.16	ENST00000345425.6	1782	7	0	-3	0	1	multi-exon	FALSE	canonical	3	40	junction_6	296.040350102632	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGGCTTCGGGGTGG	-17	True	NA	0	True	CATAAA	-20	NA	14496132	14477758	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14478568_14478683_14478766_14479411_14479525_14480304_14480486_14480592_14480779_14482688_14483007_14496036
H1_mix_00045137	chr19	-	1484	6	FSM	ENSG00000123159.16	ENST00000393028.5	1483	6	0	-1	0	1	multi-exon	FALSE	canonical	3	44	junction_5	322.474185013312	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGGCTTCGGGGTGG	6	True	NA	0	True	CATAAA	-20	NA	14496149	14477758	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14478568_14478683_14478766_14479411_14479525_14480304_14480486_14480592_14480779_14496036
H1_mix_00045138	chr19	-	2473	3	FSM	ENSG00000132002.9	ENST00000598235.2	2215	3	-245	-13	-245	0	multi-exon	FALSE	canonical	3	41	junction_2	350.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGAGCGGTCCTGTGACTC	4088	False	NA	-1	True	ATTAAA	-19	NA	14518080	14514768	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14516171_14516465_14517047_14517590
H1_mix_00045139	chr19	-	2993	2	FSM	ENSG00000132002.9	ENST00000677204.1	2623	2	-355	-15	-220	1	multi-exon	FALSE	canonical	3	742	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGCGGTCCTGTGACTCT	4113	False	NA	0	True	ATTAAA	-20	NA	14518055	14514767	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14516171_14516465
H1_mix_00045140	chr19	-	2244	3	FSM	ENSG00000132002.9	ENST00000254322.3	2242	3	0	-2	0	2	multi-exon	FALSE	canonical	3	742	junction_1	20	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCGGTCCTGTGACTCTG	-4	True	NA	1	True	ATTAAA	-21	NA	14518397	14514766	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14516171_14516465_14517047_14518138
H1_mix_00045142	chr19	-	535	3	FSM	ENSG00000099795.7	ENST00000215565.3	535	3	0	0	0	0	multi-exon	FALSE	canonical	3	2383	junction_2	69.5	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGAGTCCCCTCTTACTGC	-12	True	NA	-4	True	AATAAA	-19	NA	14572066	14566077	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14566266_14566764_14566934_14571888
H1_mix_00045143	chr19	-	609	1	FSM	ENSG00000269378.1	ENST00000596032.1	609	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTACTGCCCGTGCAAAT	NA	False	NA	NA	False	NA	NA	NA	14622242	14621633	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14621600_14622200
H1_mix_00045145	chr19	-	2420	10	FSM	ENSG00000105143.13	ENST00000594383.2	2420	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	28.6296056729333	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAAGGTCTCTGTTTCTCT	-6	True	NA	NA	False	AATAAA	-20	NA	14979864	14950032	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14950391_14952927_14953063_14954134_14954330_14956475_14956710_14962001_14962346_14964318_14964362_14968302_14968508_14971736_14971875_14972705_14972918_14979308
H1_mix_00045146	chr19	-	1943	6	NIC	ENSG00000105143.13	novel	2420	6	NA	NA	34	-5	combination_of_known_junctions	FALSE	canonical	1	2	junction_5	28.3788653754867	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAATGTTTTGAAATATCT	-4	True	NA	-21	True	AATAAA	-25	NA	14979830	14961314	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_14962346_14964318_14964362_14968302_14968508_14971736_14971875_14972705_14972914_14979512
H1_mix_00045148	chr19	-	4256	10	FSM	ENSG00000105135.16	ENST00000533086.5	4248	10	0	-8	0	8	multi-exon	FALSE	canonical	3	409	junction_3	27.2278905663174	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGTGCATATTTATTTA	1742	False	NA	-2	True	AATAAA	-40	NA	15124034	15114975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15115922_15116000_15116072_15116151_15116322_15116407_15118016_15119165_15119303_15119417_15119516_15119981_15120082_15122692_15123031_15123115_15123244_15123374
H1_mix_00045149	chr19	-	2316	16	FSM	ENSG00000105135.16	ENST00000263383.8	2305	16	0	-11	0	8	multi-exon	FALSE	canonical	3	302	junction_15	49.4913684954817	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGTGCATATTTATTTA	-10	True	NA	-2	True	AATAAA	-40	NA	15125786	15114975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15115431_15115565_15115672_15115849_15115922_15116000_15116072_15116151_15116322_15116407_15116523_15117880_15118016_15119165_15119303_15119417_15119516_15119981_15120082_15122692_15122805_15122891_15123031_15123115_15123244_15123374_15123577_15124924_15125070_15125655
H1_mix_00045150	chr19	-	687	3	FSM	ENSG00000105135.16	ENST00000525880.5	687	3	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_1	30	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCATCGAATTTGATACA	7761	False	NA	NA	False	NA	NA	NA	15118015	15115884	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15116322_15116407_15116523_15117880
H1_mix_00045152	chr19	-	8650	33	FSM	ENSG00000074181.9	ENST00000263388.7	8680	33	0	30	0	-30	multi-exon	FALSE	canonical	3	192	junction_18	63.9750622801573	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTAATAAATACTTCTTT	-1	True	NA	NA	False	NA	NA	NA	15200995	15159067	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15161715_15162464_15162563_15165367_15165516_15165786_15166092_15167248_15167412_15170085_15170171_15170330_15170554_15170670_15170826_15174067_15174401_15177524_15178091_15178822_15178942_15179024_15179283_15179363_15179497_15180071_15180257_15180680_15180829_15180960_15181163_15181575_15181802_15184294_15184451_15184905_15185020_15185256_15185409_15185486_15185680_15186877_15186989_15187104_15187339_15187880_15187995_15188234_15188349_15188988_15189175_15189272_15189429_15191423_15191658_15191744_15191868_15191959_15192299_15192376_15192520_15197499_15197579_15200787
H1_mix_00045153	chr19	-	7931	32	NIC	ENSG00000074181.9	novel	8680	33	NA	NA	-1	-594	combination_of_known_junctions	FALSE	canonical	3	63	junction_17	73.7120279148065	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTGGTCTGTGTCTAG	-2	True	NA	-1	True	AATAAA	-19	NA	15200996	15159631	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_15161715_15162464_15162563_15165367_15165516_15165786_15166092_15167248_15167412_15170085_15170171_15170330_15170554_15170670_15170826_15174067_15174401_15177524_15178091_15178822_15178942_15179024_15179283_15179363_15179497_15180071_15180257_15180680_15180829_15180960_15181163_15181575_15181802_15184905_15185020_15185256_15185409_15185486_15185680_15186877_15186989_15187104_15187339_15187880_15187995_15188234_15188349_15188988_15189175_15189272_15189429_15191423_15191658_15191744_15191868_15191959_15192299_15192376_15192520_15197499_15197579_15200787
H1_mix_00045154	chr19	-	3858	23	FSM	ENSG00000074181.9	ENST00000601011.1	3858	23	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_8	66.4238363319814	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGCCGCCCCCTGTCTCCA	268	False	NA	NA	False	NA	NA	NA	15200902	15177910	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15178091_15178822_15178942_15179024_15179283_15179363_15179497_15180071_15180257_15180680_15180829_15180960_15181163_15181575_15181802_15184905_15185020_15185256_15185409_15185486_15185680_15186877_15186989_15187104_15187339_15187880_15187995_15188234_15188349_15188988_15189175_15189272_15189429_15191423_15191658_15191744_15191868_15191959_15192299_15192376_15192520_15197499_15197579_15200787
H1_mix_00045155	chr19	-	1840	7	FSM	ENSG00000105131.8	ENST00000221730.8	1838	7	0	-2	0	2	multi-exon	FALSE	canonical	3	169	junction_6	16.0692943909253	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTATTTCATTTTTTTC	-29	True	NA	0	True	AATACA	-27	NA	15232448	15226916	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15227663_15227770_15227908_15227996_15228101_15230961_15231091_15231238_15231397_15231775_15231862_15231968
H1_mix_00045156	chr19	-	1813	9	FSM	ENSG00000105131.8	ENST00000602233.5	1805	9	0	-8	0	2	multi-exon	FALSE	canonical	3	19	junction_8	65.8003609412593	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTATTTCATTTTTTTC	8	True	NA	0	True	AATACA	-27	NA	15233435	15226916	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15227663_15227770_15227908_15227996_15228101_15230961_15231091_15231238_15231397_15231775_15231862_15231968_15232257_15232919_15233001_15233351
H1_mix_00045157	chr19	-	2463	8	NNC	ENSG00000105131.8	novel	1838	7	NA	NA	-44	0	intron_retention	FALSE	canonical	3	7	junction_7	64.8335388136576	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTGTATTTCATTTTTT	7139	False	NA	-2	True	AATACA	-25	NA	15233479	15226918	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_15227663_15227770_15227908_15227996_15228101_15230961_15231091_15231238_15231397_15231775_15231862_15231968_15233001_15233406
H1_mix_00045158	chr19	-	7231	20	FSM	ENSG00000141867.19	ENST00000679869.1	7231	20	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	375.813407759121	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCCTGTGATGGCTGCTT	-5	True	NA	47	True	AATAAA	-24	NA	15332539	15235518	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15238446_15238742_15238981_15239058_15239265_15239391_15239523_15239658_15239822_15239909_15240023_15242899_15243488_15244230_15244601_15244709_15244763_15254151_15254263_15255296_15255593_15256063_15256264_15256963_15257174_15263419_15263549_15264403_15264767_15265353_15265644_15267415_15267552_15268904_15269043_15272814_15273134_15332289
H1_mix_00045159	chr19	-	4745	12	NIC	ENSG00000141867.19	novel	4624	12	NA	NA	8	67	combination_of_known_junctions	FALSE	canonical	3	122	junction_1	395.236596157477	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACTTCCTGTCTTGTCTT	3	True	NA	-3	True	GGGGCT	-18	NA	15332531	15246979	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_15249291_15254151_15254263_15255296_15255593_15256063_15256264_15256963_15257174_15263419_15263549_15264403_15264767_15265353_15265644_15267415_15267552_15268904_15269043_15272814_15273134_15332289
H1_mix_00045160	chr19	-	3240	12	FSM	ENSG00000141867.19	ENST00000360016.9	3240	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	405.821949314542	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTGCATGTAAATAACTT	-11	True	NA	NA	False	AATAAA	-17	NA	15332545	15252991	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15253784_15254151_15254263_15255296_15255593_15256063_15256264_15256963_15257174_15263419_15263549_15264403_15264767_15265353_15265644_15267415_15267552_15268904_15269043_15272814_15273134_15332289
H1_mix_00045164	chr19	-	565	4	ISM	ENSG00000141867.19	ENST00000594841.5	1821	9	1	11415	1	0	5prime_fragment	FALSE	canonical	3	90	junction_3	462.599178555259	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCTCTTCTTGCAAAAAA	4	True	NA	NA	False	NA	NA	NA	15331905	15267513	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_15267552_15268904_15269043_15272814_15273134_15331835
H1_mix_00045165	chr19	-	3545	15	NNC	ENSG00000105127.10	novel	3715	15	NA	NA	0	48361	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	62.6523042233069	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGTCTTAATTTTAATGT	-9	True	NA	NA	False	NA	NA	NA	15379785	15305023	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_15305044_15353522_15355371_15358966_15359063_15360847_15360979_15361728_15361823_15362109_15362252_15368234_15368323_15370145_15370180_15371951_15371999_15372217_15372348_15372850_15373341_15373785_15374066_15374602_15374636_15376975_15377015_15379712
H1_mix_00045167	chr19	-	3622	13	FSM	ENSG00000105127.10	ENST00000680245.1	3609	13	0	-13	0	-2	multi-exon	FALSE	canonical	2	7	junction_12	64.8003343612773	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATCACTAGTGGAACTGC	-9	True	NA	NA	False	ATTAAA	-15	NA	15379785	15353386	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15355371_15358966_15359063_15360847_15360979_15361728_15361823_15362109_15362252_15368234_15368323_15370145_15370180_15371951_15371999_15372217_15372348_15372850_15373341_15373785_15374066_15374602_15374636_15379712
H1_mix_00045168	chr19	-	4311	14	FSM	ENSG00000105127.10	ENST00000680336.1	4311	14	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	79.2610099122367	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAGTGCAGAAAAACATCA	-11	True	NA	NA	False	ATTAAA	-2	NA	15379787	15353399	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15355371_15358966_15359063_15360847_15360979_15361728_15361823_15362109_15362252_15368234_15368323_15369066_15369225_15370145_15370180_15371951_15371999_15372217_15373341_15373785_15374066_15374602_15374636_15376975_15377015_15379712
H1_mix_00045169	chr19	-	3678	14	FSM	ENSG00000105127.10	ENST00000269701.7	3665	14	-28	15	0	0	multi-exon	FALSE	canonical	3	191	junction_10	26.1721655298279	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAGTGCAGAAAAACATCA	-4	True	NA	NA	False	ATTAAA	-2	NA	15379815	15353399	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15355371_15358966_15359063_15360847_15360979_15361728_15361823_15362109_15362252_15368234_15368323_15370145_15370180_15371951_15371999_15372217_15372348_15372850_15373341_15373785_15374066_15374602_15374636_15376975_15377015_15379712
H1_mix_00045170	chr19	-	3715	15	FSM	ENSG00000105127.10	ENST00000598597.7	3715	15	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	76.430340433466	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCCTCTGGGTCATTTC	-4	True	NA	1	True	AATAAA	-17	NA	15379815	15353520	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15355371_15358966_15359063_15360847_15360979_15361728_15361823_15362109_15362252_15368234_15368323_15369066_15369225_15370145_15370180_15371951_15371999_15372217_15372348_15372850_15373341_15373785_15374066_15374602_15374636_15376975_15377015_15379712
H1_mix_00045172	chr19	-	3930	13	FSM	ENSG00000011243.19	ENST00000595879.6	3907	13	0	-23	0	0	multi-exon	FALSE	canonical	1	284	junction_10	164.72595086655	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGGGTTTCTCTGTTAC	-1	True	NA	-4	True	AATAAA	-15	NA	15418969	15380049	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15403716_15404009_15404043_15410519_15410595_15418910
H1_mix_00045174	chr19	-	2078	14	FSM	ENSG00000011243.19	ENST00000397410.10	2078	14	0	0	0	0	multi-exon	FALSE	canonical	1	284	junction_11	158.275095694679	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGGGTTTCTCTGTTAC	18	True	NA	-4	True	AATAAA	-15	NA	15418988	15380049	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
H1_mix_00045175	chr19	-	2784	14	FSM	ENSG00000011243.19	ENST00000593845.5	2749	14	-34	-1	0	0	multi-exon	FALSE	canonical	1	138	junction_5	215.796035631063	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGGGTTTCTCTGTTAC	-16	True	NA	-4	True	AATAAA	-15	NA	15419022	15380049	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15398629_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
H1_mix_00045176	chr19	-	2113	16	FSM	ENSG00000011243.19	ENST00000609519.5	2113	16	0	0	0	0	multi-exon	FALSE	canonical	1	105	junction_6	259.683311404915	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGGGTTTCTCTGTTAC	18	True	NA	-4	True	AATAAA	-15	NA	15418988	15380049	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15398629_15398767_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403556_15403657_15403716_15404009_15404043_15410519_15410595_15418910
H1_mix_00045178	chr19	-	2406	13	FSM	ENSG00000011243.19	ENST00000596213.6	2390	13	0	-16	0	0	multi-exon	FALSE	canonical	3	528	junction_5	104.950649778307	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGGGTTTCTCTGTTAC	-16	True	NA	-4	True	AATAAA	-15	NA	15419022	15380049	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15404043_15410519_15410595_15418910
H1_mix_00045180	chr19	-	2018	15	FSM	ENSG00000011243.19	ENST00000680649.1	2002	15	0	-16	0	0	multi-exon	FALSE	canonical	1	284	junction_12	184.426468948954	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGGGTTTCTCTGTTAC	-24	True	NA	-4	True	AATAAA	-15	NA	15419030	15380049	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403556_15403657_15403716_15404009_15404043_15410519_15410595_15418910
H1_mix_00045181	chr19	-	3009	13	FSM	ENSG00000011243.19	ENST00000680703.1	2995	13	9	-23	-5	0	multi-exon	FALSE	canonical	1	284	junction_10	163.20530696709	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGGGTTTCTCTGTTAC	NA	False	NA	-4	True	AATAAA	-15	NA	15419035	15380049	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15399301_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
H1_mix_00045183	chr19	-	2165	16	FSM	ENSG00000011243.19	ENST00000594594.6	2251	16	86	0	-5	0	multi-exon	FALSE	canonical	1	50	junction_12	286.246622493417	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGGGTTTCTCTGTTAC	NA	False	NA	-4	True	AATAAA	-15	NA	15419035	15380049	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15398629_15398767_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403556_15403652_15403716_15404009_15404043_15410519_15410595_15418910
H1_mix_00045184	chr19	-	2226	15	FSM	ENSG00000011243.19	ENST00000680803.1	2235	15	9	0	-5	0	multi-exon	FALSE	canonical	1	105	junction_6	254.781188633762	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGGAAACCAAACCTAATA	NA	False	NA	-40	True	NA	NA	NA	15419035	15380085	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15398629_15398767_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
H1_mix_00045185	chr19	-	4308	13	FSM	ENSG00000011243.19	ENST00000681405.1	4308	13	0	0	0	0	multi-exon	FALSE	canonical	1	284	junction_10	193.311421172044	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGGAAACCAAACCTAATA	-20	True	NA	-40	True	NA	NA	NA	15419026	15380085	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403556_15403657_15403716_15404009_15404043_15410519_15410595_15418910
H1_mix_00045188	chr19	-	2172	15	FSM	ENSG00000011243.19	ENST00000680303.1	2172	15	0	0	0	0	multi-exon	FALSE	canonical	1	18	junction_6	268.351239525928	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGGAAACCAAACCTAATA	NA	False	NA	-40	True	NA	NA	NA	15419044	15380085	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15398629_15398704_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
H1_mix_00045189	chr19	-	3119	14	FSM	ENSG00000011243.19	ENST00000680103.1	3119	14	0	0	0	0	multi-exon	FALSE	canonical	1	105	junction_6	264.396689592468	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGGAAACCAAACCTAATA	NA	False	NA	-40	True	NA	NA	NA	15419044	15380085	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15398629_15398767_15399301_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
H1_mix_00045190	chr19	-	3544	13	FSM	ENSG00000011243.19	ENST00000681744.1	3544	13	0	0	0	0	multi-exon	FALSE	canonical	1	284	junction_10	155.751136967493	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGGAAACCAAACCTAATA	NA	False	NA	-40	True	NA	NA	NA	15419044	15380085	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
H1_mix_00045192	chr19	-	2971	14	FSM	ENSG00000011243.19	ENST00000600065.6	2980	14	9	0	-5	0	multi-exon	FALSE	canonical	1	14	junction_1	289.897023136956	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCGTAAAGTTAGAGATAT	NA	False	NA	NA	False	NA	NA	NA	15419035	15380863	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15382050_15397149_15397281_15397519_15397626_15397713_15397856_15398629_15398767_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
H1_mix_00045193	chr19	-	590	1	FSM	ENSG00000279203.1	ENST00000624655.1	631	1	-96	137	-96	-137	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAAGAGGCTAGCATGGG	NA	False	NA	NA	False	AATAAA	-42	NA	15383928	15383338	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15383300_15383900
H1_mix_00045195	chr19	-	5909	8	FSM	ENSG00000011451.21	ENST00000674089.4	5957	8	31	17	31	-17	multi-exon	TRUE	canonical	3	32	junction_7	35.6908494532405	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGTTTTAAAACACACGA	-19	True	NA	NA	False	AAAAAG	-18	NA	15432730	15419994	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15423236_15424182_15424379_15424612_15425033_15425240_15425769_15426981_15427534_15429585_15430090_15431011_15431183_15432433
H1_mix_00045196	chr19	-	6308	9	FSM	ENSG00000011451.21	ENST00000674001.1	6356	9	31	17	31	-17	multi-exon	FALSE	canonical	3	32	junction_8	34.006433214908	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGTTTTAAAACACACGA	-19	True	NA	NA	False	AAAAAG	-18	NA	15432730	15419994	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15423236_15424182_15424379_15424612_15425033_15425240_15425769_15426981_15427534_15428109_15428509_15429585_15430090_15431011_15431183_15432433
H1_mix_00045200	chr19	-	683	4	FSM	ENSG00000105122.13	ENST00000609274.5	1717	4	0	1034	0	-1000	multi-exon	FALSE	canonical	1	1	junction_3	1.4142135623731	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCCCAGCCCTCTCCAT	9996	False	NA	NA	False	NA	NA	NA	15454375	15452657	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15452816_15453106_15453498_15454148_15454268_15454360
H1_mix_00045201	chr19	-	2860	22	NIC	ENSG00000127527.14	novel	3082	23	NA	NA	0	3	combination_of_known_splicesites	FALSE	canonical	3	90	junction_1	34.0804037960599	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAGCTTCTTTAATCTCT	16	True	NA	-13	True	TATAAA	-45	NA	16471950	16355243	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_16355852_16385128_16385212_16386170_16386232_16392303_16392441_16393950_16394002_16395343_16395468_16402320_16402486_16403732_16403931_16404587_16404750_16413772_16413846_16417551_16417638_16417947_16418105_16421318_16421477_16425082_16425317_16428701_16428762_16434364_16434491_16436936_16437000_16437769_16437866_16440861_16440910_16441891_16441982_16442177_16442220_16471912
H1_mix_00045202	chr19	-	3216	24	FSM	ENSG00000127527.14	ENST00000455140.7	3216	24	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	59.9192272949337	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAGAAGCTTCTTTAATC	-4	True	NA	-16	True	TATAAA	-42	NA	16471970	16355246	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16355852_16361778_16361985_16377121_16377255_16385128_16385212_16386170_16386232_16392303_16392441_16393950_16394002_16395343_16395468_16402320_16402486_16403732_16403931_16404587_16404750_16413772_16413846_16417551_16417638_16417947_16418105_16421318_16421477_16425082_16425317_16428701_16428762_16434364_16434491_16436936_16437000_16437769_16437866_16440861_16440910_16441891_16441982_16442177_16442220_16471912
H1_mix_00045203	chr19	-	3087	24	NIC	ENSG00000127527.14	novel	3216	24	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	64.6367777931284	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGAGAAGCTTCTTTAAT	17	True	NA	-17	True	TATAAA	-41	NA	16471949	16355247	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_16355852_16361885_16361985_16377121_16377255_16385128_16385212_16386170_16386232_16392303_16392441_16393950_16394002_16395343_16395468_16402320_16402486_16403732_16403931_16404587_16404750_16413772_16413846_16417551_16417638_16417947_16418105_16421318_16421477_16425082_16425317_16428701_16428762_16434364_16434491_16436936_16437000_16437769_16437866_16440861_16440910_16441891_16441982_16442177_16442220_16471912
H1_mix_00045204	chr19	-	2788	23	FSM	ENSG00000127527.14	ENST00000592031.5	2788	23	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_19	64.4794797263837	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGGATGCTCTATCATA	-4	True	NA	-19	True	AATAAA	-16	NA	16471970	16361578	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16361985_16377121_16377255_16385128_16385212_16386170_16386232_16392303_16392441_16393950_16394002_16395343_16395468_16402320_16402486_16403732_16403931_16404587_16404750_16413772_16413846_16417551_16417638_16417947_16418105_16421318_16421477_16425082_16425317_16428701_16428762_16434364_16434491_16436936_16437000_16437769_16437866_16440884_16440910_16441891_16441982_16442177_16442220_16471912
H1_mix_00045205	chr19	-	2900	23	FSM	ENSG00000127527.14	ENST00000248070.10	2924	23	26	-2	26	0	multi-exon	FALSE	canonical	3	60	junction_1	50.4208732848799	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGGATGCTCTATCATA	NA	False	NA	-19	True	AATAAA	-16	NA	16472059	16361578	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16361985_16377121_16377255_16385128_16385212_16386170_16386232_16392303_16392441_16393950_16394002_16395343_16395468_16402320_16402486_16403732_16403931_16404587_16404750_16413772_16413846_16417551_16417638_16417947_16418105_16421318_16421477_16425082_16425317_16428701_16428762_16434364_16434491_16436936_16437000_16437769_16437866_16440861_16440910_16441891_16441982_16442177_16442220_16471912
H1_mix_00045206	chr19	-	3889	22	FSM	ENSG00000127527.14	ENST00000535753.6	2666	22	10	-1233	0	1215	multi-exon	FALSE	canonical	3	59	junction_1	39.8376524001206	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTATACAAAATGGTGACAT	0	True	NA	NA	False	NA	NA	NA	16471966	16360363	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16361985_16385128_16385212_16386170_16386232_16392303_16392441_16393950_16394002_16395343_16395468_16402320_16402486_16403732_16403931_16404587_16404750_16413772_16413846_16417551_16417638_16417947_16418105_16421318_16421477_16425082_16425317_16428701_16428762_16434364_16434491_16436936_16437000_16437769_16437866_16440861_16440910_16441891_16441982_16442177_16442220_16471912
H1_mix_00045210	chr19	-	4086	17	FSM	ENSG00000085872.15	ENST00000198939.6	4084	17	0	-2	0	0	multi-exon	FALSE	canonical	3	24	junction_12	131.148234357158	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCTCCCGCACATGTGT	24	True	NA	-23	True	AATAAA	-16	NA	16542415	16517893	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16519353_16519620_16519716_16520148_16520266_16520363_16520508_16520825_16520913_16521520_16521655_16523051_16523291_16525241_16525678_16528079_16528256_16529647_16529901_16530584_16530675_16530768_16530914_16532597_16532750_16533010_16533149_16535451_16535637_16541869_16542044_16542353
H1_mix_00045211	chr19	-	4075	17	FSM	ENSG00000085872.15	ENST00000546361.7	4075	17	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_3	56.1120530724015	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCTCCCGCACATGTGT	2	True	NA	-23	True	AATAAA	-16	NA	16542437	16517893	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16519353_16519620_16519716_16520148_16520266_16520363_16520508_16520825_16520913_16521520_16521655_16523051_16523291_16525241_16525678_16528079_16528256_16529647_16529901_16530584_16530675_16530768_16530881_16532597_16532750_16533010_16533149_16535451_16535637_16541869_16542044_16542353
H1_mix_00045216	chr19	-	3183	3	FSM	ENSG00000105085.11	ENST00000263390.8	3172	3	0	-11	0	-1	multi-exon	FALSE	canonical	3	54	junction_2	1.5	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTGAGAATCTTTTCTC	-4	True	NA	NA	False	AATAAA	-28	NA	16628204	16574907	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16577683_16578334_16578410_16627871
H1_mix_00045217	chr19	-	1289	5	FSM	ENSG00000214046.9	ENST00000465250.6	1281	5	0	-8	0	8	multi-exon	FALSE	canonical	3	76	junction_1	272.874513284037	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTTGTGTATCCTGGT	7	True	NA	-12	True	AATAAA	-15	NA	16660130	16630742	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16631725_16647095_16647262_16659394_16659448_16659958_16660001_16660084
H1_mix_00045218	chr19	-	1473	1	FSM	ENSG00000269044.2	ENST00000598112.2	1473	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTTATATGCTGCATT	NA	False	NA	-8	True	AATAAA	-24	NA	16635269	16633796	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16633800_16635300
H1_mix_00045219	chr19	-	2190	6	FSM	ENSG00000214046.9	ENST00000487803.5	2190	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	294.070331723552	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGAGTAAGTGGAATTT	7	True	NA	NA	False	NA	NA	NA	16660130	16645660	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16647262_16652604_16652962_16654034_16654126_16659394_16659448_16659958_16660001_16660084
H1_mix_00045220	chr19	-	1526	6	FSM	ENSG00000214046.9	ENST00000599310.5	1123	6	300	-703	0	0	multi-exon	FALSE	canonical	3	113	junction_1	210.419200644808	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGAGTAAGTGGAATTT	-5	True	NA	NA	False	NA	NA	NA	16660142	16645660	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16646801_16647119_16647262_16654034_16654126_16659394_16659448_16659958_16660001_16660084
H1_mix_00045221	chr19	-	3336	5	FSM	ENSG00000214046.9	ENST00000487416.7	1360	5	27	-2003	0	1516	multi-exon	FALSE	canonical	3	564	junction_1	43.4453679924569	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	20	True	NA	NA	False	AAAACA	-3	NA	16660117	16644144	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16647262_16654034_16654126_16659394_16659448_16659958_16660001_16660084
H1_mix_00045222	chr19	-	4029	6	FSM	ENSG00000214046.9	ENST00000593404.5	1065	6	-935	-2029	-637	1542	multi-exon	FALSE	canonical	3	185	junction_1	182.192206199936	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCAAACAATTTCCAGCCTG	NA	False	NA	NA	False	AAAACA	-29	NA	16661079	16644118	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16646801_16647095_16647262_16654034_16654126_16659394_16659448_16659958_16660001_16660084
H1_mix_00045223	chr19	-	1075	4	FSM	ENSG00000214046.9	ENST00000597711.5	1075	4	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	234.90565482054	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGATTTGCTTGTTGA	-7	True	NA	-48	True	AATGAA	-30	NA	16660144	16646341	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16647262_16659394_16659448_16659958_16660001_16660084
H1_mix_00045224	chr19	-	534	5	FSM	ENSG00000214046.9	ENST00000602194.5	534	5	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_2	243.968619908381	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATGACTTTGGGAGCCA	-7	True	NA	-41	True	NA	NA	NA	16660144	16646587	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16646801_16647095_16647262_16659394_16659448_16659958_16660001_16660084
H1_mix_00045227	chr19	-	2031	3	FSM	ENSG00000160111.15	ENST00000596224.5	2117	3	85	1	37	-1	multi-exon	FALSE	canonical	3	11	junction_2	7	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCACATGTTCTGGGGTG	86	False	NA	-8	True	AATACA	-13	NA	16896856	16892958	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16894438_16896175_16896327_16896455
H1_mix_00045228	chr19	-	6910	42	FSM	ENSG00000160111.15	ENST00000651564.2	6913	42	0	3	0	0	multi-exon	TRUE	canonical	2	8	junction_8	15.6421919102563	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTTCTGGGGTGCACAT	9389	False	NA	-3	True	AATACA	-18	NA	17026642	16892953	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16894438_16896175_16896327_16896455_16896666_16897690_16897802_16897888_16897995_16899474_16899550_16901209_16901298_16902648_16902864_16903560_16903624_16903701_16903858_16904225_16904363_16904465_16904553_16906951_16907118_16914423_16914499_16914656_16914814_16921904_16921987_16925195_16925373_16928008_16928235_16928941_16929241_16938394_16938447_16945548_16945680_16947073_16947228_16951968_16952201_16957852_16957916_16970890_16971034_16975096_16975259_16976001_16976152_16977367_16977541_16980496_16980687_16989642_16989772_16993415_16993587_16997110_16997339_17000413_17000523_17002265_17002351_17004272_17004387_17008504_17008560_17009302_17009321_17011463_17011517_17011591_17011758_17020330_17020354_17022029_17022182_17026550
H1_mix_00045229	chr19	-	5975	42	FSM	ENSG00000160111.15	ENST00000443236.7	5983	42	0	8	0	-1	multi-exon	FALSE	canonical	0	0	junction_1	16.1419196656951	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCACATGTTCTGGGGTG	-2	True	NA	-8	True	AATACA	-13	NA	17026810	16892958	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16893340_16896175_16896327_16896455_16896666_16897690_16897802_16897888_16897995_16899474_16899550_16901209_16901298_16902648_16902864_16903560_16903624_16903701_16903858_16904225_16904363_16904465_16904553_16906951_16907118_16914423_16914499_16914656_16914814_16921904_16921987_16925195_16925373_16928008_16928235_16928941_16929241_16938394_16938447_16945548_16945680_16947073_16947228_16951968_16952201_16957852_16957916_16970890_16971034_16975096_16975259_16976001_16976152_16977367_16977541_16980496_16980687_16989642_16989772_16993415_16993587_16997110_16997339_17000413_17000523_17002265_17002351_17004272_17004387_17008504_17008560_17009302_17009321_17011463_17011517_17011591_17011758_17020330_17020354_17022029_17022182_17026550
H1_mix_00045230	chr19	-	2856	19	ISM	ENSG00000160111.15	ENST00000443236.7	5983	42	-105	64595	-100	1	5prime_fragment	FALSE	canonical	2	24	junction_15	8.92717449389472	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAACTTGACTCCACCTAC	9116	False	NA	-5	True	ATTAAA	-22	NA	17026915	16957545	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_16957916_16970890_16971034_16975096_16975259_16976001_16976152_16977367_16977541_16980496_16980687_16989642_16989772_16993415_16993587_16997110_16997339_17000413_17000523_17002265_17002351_17004272_17004387_17008504_17008560_17009302_17009321_17011463_17011517_17011591_17011758_17020330_17020354_17022029_17022182_17026550
H1_mix_00045231	chr19	-	1407	11	FSM	ENSG00000131351.15	ENST00000253669.10	1407	11	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_7	15.9752934245353	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGTGTTTTCTCAAGTT	-9	True	NA	2	True	NA	NA	NA	17075452	17049728	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_17050177_17052824_17052967_17055860_17056003_17058548_17058708_17058810_17058877_17059556_17059652_17059996_17060093_17062697_17062780_17069030_17069087_17073273_17073336_17075393
H1_mix_00045232	chr19	-	1545	11	FSM	ENSG00000131351.15	ENST00000448593.6	1545	11	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_7	57.3515474943789	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCCATTTTCTATGAAGG	4852	False	NA	-30	True	AGTAAA	-18	NA	17075625	17049760	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_17050177_17052824_17052967_17055860_17056003_17058548_17058708_17058810_17058877_17059556_17059652_17059996_17060090_17062697_17062780_17069030_17069087_17073273_17073336_17075393
H1_mix_00045233	chr19	-	2870	10	FSM	ENSG00000131351.15	ENST00000593360.1	3176	10	311	-5	311	0	multi-exon	FALSE	canonical	3	181	junction_7	16.8288406179157	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCCATTTTCTATGAAGG	5588	False	NA	-30	True	AGTAAA	-18	NA	17074889	17049760	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_17050177_17052824_17052967_17055860_17056003_17058548_17058708_17058810_17058877_17059556_17059652_17059996_17060093_17062697_17062780_17069030_17069087_17073273
H1_mix_00045234	chr19	-	2391	4	FSM	ENSG00000160113.6	ENST00000291442.4	2383	4	0	-8	0	8	multi-exon	FALSE	canonical	3	608	junction_2	220.834779869476	440	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTTATTTTTATTTTTT	1	True	NA	3	True	AATAAA	-28	NA	17245919	17231874	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_17232627_17235498_17236066_17240670_17240766_17244942
H1_mix_00045236	chr19	-	3289	13	FSM	ENSG00000130307.12	ENST00000252597.8	3289	13	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	6.19755776271768	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGGAGACTGAAGCTGGA	10	True	NA	NA	False	AATAAA	-28	NA	17264745	17249170	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_17250415_17251581_17251705_17251910_17252018_17255384_17255607_17256470_17256721_17258211_17258386_17259288_17259430_17259595_17259733_17259896_17260023_17262551_17262991_17264001_17264151_17264245_17264348_17264670
H1_mix_00045237	chr19	-	577	4	FSM	ENSG00000130307.12	ENST00000594190.5	577	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	13.4412301024373	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCACACTCTGAGCTCCC	-1	True	NA	NA	False	NA	NA	NA	17264724	17262828	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_17262991_17264001_17264151_17264245_17264348_17264560
H1_mix_00045239	chr19	-	2048	5	FSM	ENSG00000127220.6	ENST00000247706.4	2042	5	0	-6	0	6	multi-exon	FALSE	canonical	3	146	junction_2	11.2998893799895	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCTGTGCTGGGTGACCA	-20	True	NA	-2	True	AATAAA	-24	NA	17303425	17292124	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_17292832_17294287_17294505_17294674_17294846_17300855_17301625_17303241
H1_mix_00045241	chr19	-	1005	5	FSM	ENSG00000130303.14	ENST00000252593.7	1001	5	0	-4	0	4	multi-exon	FALSE	canonical	3	684	junction_2	51.9488931547151	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGTTCCTGGAGTATCATC	1760	False	17405647	-5	True	AATAAA	-33	NA	17405630	17402934	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_17403327_17403679_17403825_17404128_17404190_17404370_17404438_17405290
H1_mix_00045242	chr19	-	1007	4	FSM	ENSG00000130303.14	ENST00000527220.2	879	4	-124	-4	-69	4	multi-exon	FALSE	canonical	2	10	junction_3	326.542833671514	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGTTCCTGGAGTATCATC	1691	False	NA	-5	True	AATAAA	-33	NA	17405699	17402934	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_17403327_17403679_17403825_17404128_17404190_17405290
H1_mix_00045243	chr19	-	2031	3	FSM	ENSG00000188051.7	ENST00000341130.6	2031	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTGTTACTCAATGTT	3	True	NA	-10	True	AGTAAA	-16	NA	17448668	17435508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_17436928_17445198_17445285_17448142
H1_mix_00045244	chr19	-	865	1	FSM	ENSG00000269439.7	ENST00000615939.1	751	1	-106	-8	-106	8	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACGAGGACTCATACT	937	False	NA	NA	False	AATAAA	-39	NA	17510956	17510091	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_17510100_17511000
H1_mix_00045245	chr19	-	9946	41	NIC	ENSG00000130477.16	novel	9985	44	NA	NA	1	9	combination_of_known_splicesites	TRUE	canonical	2	3	junction_8	11.1731821787707	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGGTTGCCTCCTCCTTG	3	True	NA	-21	True	ATTAAA	-29	NA	17688348	17601326	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_17606355_17609939_17610100_17611762_17611856_17617701_17617850_17618420_17618502_17618905_17618963_17620692_17620723_17621831_17621871_17624828_17624953_17626632_17626786_17627508_17627598_17627862_17627941_17629239_17629324_17630144_17630289_17630653_17630751_17632781_17632909_17633107_17633194_17636023_17636158_17639082_17639218_17639435_17639526_17639839_17639909_17640510_17640662_17641392_17641557_17642844_17642961_17645673_17645844_17645969_17646112_17647264_17647493_17648430_17648651_17648911_17648984_17649508_17649588_17652630_17652678_17655273_17655383_17655882_17656399_17658061_17658270_17663531_17663568_17666649_17666705_17668116_17668191_17669552_17669677_17672377_17672496_17674656_17674757_17688177
H1_mix_00045246	chr19	-	9893	39	NIC	ENSG00000130477.16	novel	5200	40	NA	NA	0	8	combination_of_known_splicesites	FALSE	canonical	2	8	junction_6	10.9163274495661	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGTGGTTGCCTCCTCCTT	12	False	17688377	-22	True	ATTAAA	-28	NA	17688365	17601327	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_17606355_17609939_17610100_17611762_17611856_17617701_17617850_17618420_17618502_17618905_17618963_17624828_17624953_17626632_17626786_17627508_17627598_17627862_17627941_17629239_17629324_17630144_17630289_17630653_17630751_17632781_17632909_17633107_17633194_17636023_17636158_17639082_17639218_17639435_17639526_17639839_17639909_17640510_17640662_17641392_17641557_17642844_17642961_17645673_17645844_17645969_17646112_17647264_17647493_17648430_17648651_17648911_17648984_17649508_17649588_17652630_17652678_17655273_17655383_17655882_17656399_17658061_17658270_17663531_17663568_17666649_17666705_17668116_17668191_17669552_17669677_17672377_17672496_17674656_17674757_17688177
H1_mix_00045247	chr19	-	504	5	FSM	ENSG00000130477.16	ENST00000517497.2	584	5	80	0	80	0	multi-exon	FALSE	canonical	3	54	junction_3	5.85234995535981	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGGGCTCCCAAGTACAA	92	False	NA	NA	False	AAGAAA	-31	NA	17618962	17609974	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_17610100_17611762_17611856_17617701_17617850_17618420_17618502_17618905
H1_mix_00045248	chr19	-	690	3	FSM	ENSG00000130477.16	ENST00000601528.1	1062	3	27	345	27	-345	multi-exon	FALSE	canonical	3	50	junction_2	4.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTGGGCCAGGTGGAC	NA	False	NA	NA	False	NA	NA	NA	17628310	17626632	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_17626786_17627508_17627598_17627862
H1_mix_00045249	chr19	-	2481	3	ISM	ENSG00000105639.20	ENST00000527670.5	3996	23	13706	-1372	11784	0	3prime_fragment	FALSE	canonical	3	26	junction_2	3.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGCTGGACTTGGGGC	77	False	NA	-1	True	AATAAA	-19	NA	17830741	17824779	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_17826911_17830107_17830219_17830502
H1_mix_00045252	chr19	-	1899	1	FSM	ENSG00000130522.6	ENST00000252818.5	1929	1	-24	54	-24	-54	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTTCTTCCCCCGCCG	NA	False	NA	3	True	AGTAAA	-27	NA	18281646	18279747	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18279700_18281600
H1_mix_00045253	chr19	-	1709	5	FSM	ENSG00000130520.11	ENST00000593829.6	1704	5	0	-5	0	5	multi-exon	FALSE	canonical	3	3376	junction_4	358.518479300579	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGAGTCTTCAGAGTT	6	True	NA	-7	True	AATAAA	-25	NA	18323076	18306230	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18307556_18309677_18309862_18312603_18312703_18316023_18316066_18323017
H1_mix_00045254	chr19	-	986	4	FSM	ENSG00000130520.11	ENST00000252816.10	986	4	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_3	1833.29775723058	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTGTTCCTTTTGAGCT	11	True	NA	-16	True	AATAAA	-26	NA	18323071	18306906	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18307556_18309677_18309862_18312603_18312703_18323017
H1_mix_00045255	chr19	-	807	4	FSM	ENSG00000130520.11	ENST00000594828.7	807	4	0	0	0	0	multi-exon	FALSE	canonical	3	3376	junction_3	412.637317211562	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCAGGGGCCATCTGTAG	5	True	NA	NA	False	CATAAA	-14	NA	18323112	18309290	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18309862_18312603_18312703_18316023_18316066_18323017
H1_mix_00045257	chr19	-	2039	8	FSM	ENSG00000105655.19	ENST00000582811.6	2039	8	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_7	268.694120911204	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGTGTGGGGCCTCCCAG	8355	False	NA	-18	True	AATAAA	-13	NA	18438111	18434387	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18436480_18436683_18436878_18437859
H1_mix_00045258	chr19	-	2252	11	FSM	ENSG00000105655.19	ENST00000338128.13	2252	11	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_10	102.318180202738	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGTGTGGGGCCTCCCAG	1	True	NA	-18	True	AATAAA	-13	NA	18438133	18434387	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18436480_18436683_18436878_18436972_18437106_18437598_18437761_18437859_18437989_18438092
H1_mix_00045259	chr19	-	2161	9	FSM	ENSG00000105655.19	ENST00000577916.6	2148	9	0	-13	0	0	multi-exon	FALSE	canonical	3	595	junction_8	107.431373443701	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGGTTCTTGGGGCCTG	-5	True	NA	-29	True	AATAAA	-27	NA	18438164	18434808	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18437106_18437598_18437761_18437859_18437989_18438092
H1_mix_00045260	chr19	-	1703	10	FSM	ENSG00000105655.19	ENST00000457269.8	1703	10	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_8	236.78119294685	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGGTTCTTGGGGCCTG	8299	False	NA	-29	True	AATAAA	-27	NA	18438167	18434808	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18436480_18436683_18436878_18436972_18437106_18437859_18437989_18438092
H1_mix_00045261	chr19	-	1466	9	FSM	ENSG00000105655.19	ENST00000577820.5	1466	9	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_7	254.641138418363	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCTTGAAGGCCCCCACA	8351	False	NA	-81	True	NA	NA	NA	18438115	18434860	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18436480_18436683_18436878_18437859_18437989_18438092
H1_mix_00045265	chr19	-	3967	12	FSM	ENSG00000105656.13	ENST00000262809.9	3970	12	3	0	0	0	multi-exon	FALSE	canonical	3	72	junction_5	10.0395910489298	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCAGCCCAGGCTGCCT	-3	True	NA	-6	True	AATAAA	-16	NA	18522067	18442662	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18444869_18445223_18445269_18446308_18446481_18446747_18446815_18450476_18450976_18451551_18451649_18458204_18458330_18461577_18461853_18465411_18465576_18465796_18465919_18472834_18472883_18521920
H1_mix_00045266	chr19	-	1756	9	FSM	ENSG00000105701.16	ENST00000596558.6	1756	9	0	0	0	0	multi-exon	FALSE	canonical	3	856	junction_8	889.330919497911	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCACGGACTCCTGAGCT	4	True	NA	-10	True	AATAAA	-17	NA	18542972	18531761	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18532256_18532663_18532796_18533269_18533348_18537600_18537774_18538215_18538434_18539370_18539460_18539550_18539721_18541678_18541996_18542887
H1_mix_00045267	chr19	-	1727	9	FSM	ENSG00000105701.16	ENST00000222308.8	1710	9	0	-17	0	6	multi-exon	FALSE	canonical	0	0	junction_8	1108.21398401888	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTCTTCTCCCGCTGTCT	529	False	NA	7	True	AATAAA	-34	NA	18543524	18531744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18532256_18532663_18532796_18533269_18533348_18537600_18537774_18538215_18538434_18539370_18539460_18539550_18539721_18541678_18541996_18543485
H1_mix_00045268	chr19	-	1779	9	FSM	ENSG00000105701.16	ENST00000608443.6	1761	9	0	-18	0	6	multi-exon	FALSE	canonical	0	0	junction_8	1035.05023277858	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTCTTCTCCCGCTGTCT	-1	True	NA	7	True	AATAAA	-34	NA	18543573	18531744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18532256_18532663_18532796_18533269_18533348_18537600_18537774_18538215_18538437_18539370_18539460_18539550_18539721_18541678_18541996_18543485
H1_mix_00045270	chr19	-	612	4	FSM	ENSG00000105701.16	ENST00000596015.1	612	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	1427.60942371037	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTCCCTGTCCACTGCC	5682	False	NA	NA	False	NA	NA	NA	18538371	18532104	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18532256_18532663_18532796_18537600_18537774_18538215
H1_mix_00045273	chr19	-	1779	9	FSM	ENSG00000006016.12	ENST00000684169.1	1746	9	-32	-1	-32	1	multi-exon	FALSE	canonical	3	14	junction_5	12.5393131789584	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTGTGAAGGTGAGTTT	NA	False	NA	-3	True	AATAAA	-18	NA	18606831	18593235	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18593580_18594064_18594113_18594246_18594435_18596621_18596791_18596891_18597050_18598431_18598602_18598771_18598902_18599564_18599847_18606541
H1_mix_00045274	chr19	-	1742	9	FSM	ENSG00000006016.12	ENST00000392386.8	1741	9	0	-1	0	1	multi-exon	FALSE	canonical	3	14	junction_5	12.6682427747498	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTGTGAAGGTGAGTTT	-7	True	NA	-3	True	AATAAA	-18	NA	18606799	18593235	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18593580_18594064_18594108_18594246_18594435_18596621_18596791_18596891_18597050_18598431_18598602_18598771_18598902_18599564_18599847_18606541
H1_mix_00045275	chr19	-	2579	8	FSM	ENSG00000130283.9	ENST00000247005.8	2579	8	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	74.6376279781457	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGTCTCCTTGGACTCC	9580	False	18896176	-8	True	AATAAA	-18	NA	18896158	18868544	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18869391_18869982_18870620_18878929_18879040_18879240_18879389_18880273_18880436_18884086_18884268_18893415_18893576_18895823
H1_mix_00045276	chr19	-	757	5	FSM	ENSG00000223802.9	ENST00000596048.1	749	5	0	-8	0	0	multi-exon	FALSE	canonical	3	104	junction_1	56.7472466292418	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGCTCGAGCTGGTAT	-3	True	NA	-4	True	AATAAA	-22	NA	18884233	18877908	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18878099_18878929_18879040_18879240_18879389_18880273_18880436_18884086
H1_mix_00045277	chr19	-	2094	6	FSM	ENSG00000223802.9	ENST00000429504.6	2094	6	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_5	25.2222124326951	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGCTCGAGCTGGTAT	2	True	NA	-4	True	AATAAA	-22	NA	18896135	18877908	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18879040_18879240_18879389_18880273_18880436_18884086_18884268_18893415_18893576_18895823
H1_mix_00045278	chr19	-	1131	10	FSM	ENSG00000105669.14	ENST00000262812.9	1131	10	0	0	0	0	multi-exon	TRUE	canonical	3	2182	junction_7	247.864259944883	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGCTCTGGTCACTTT	-13	True	NA	-2	True	AATAAA	-29	NA	18919387	18899513	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18899727_18899872_18899948_18900380_18900450_18903267_18903424_18904770_18904853_18905575_18905630_18906959_18907113_18910970_18911072_18912983_18913047_18919222
H1_mix_00045279	chr19	-	2006	10	NNC	ENSG00000105669.14	novel	1144	11	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_6	904.090826312391	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGATGTGCTCTGGTCAC	11	True	NA	-5	True	AATAAA	-26	NA	18919363	18899516	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_18899727_18899872_18899948_18900380_18900450_18903267_18903424_18904770_18904853_18905575_18906532_18906959_18907113_18910970_18911072_18912983_18913047_18919222
H1_mix_00045280	chr19	-	948	9	FSM	ENSG00000105669.14	ENST00000349893.8	948	9	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_3	869.002652110452	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGATGTGCTCTGGTCAC	11	True	NA	-5	True	AATAAA	-26	NA	18919363	18899516	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18899727_18899872_18899948_18900380_18900450_18904770_18904853_18905575_18905630_18906959_18907113_18910970_18911072_18912983_18913047_18919222
H1_mix_00045281	chr19	-	434	4	FSM	ENSG00000105669.14	ENST00000595984.5	434	4	0	0	0	0	multi-exon	FALSE	canonical	2	100	junction_2	1325.62572227441	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGTTCCACCTGATGATG	3189	False	NA	-17	True	AATAAA	-14	NA	18903300	18899528	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18899727_18899872_18900007_18900380_18900450_18903267
H1_mix_00045282	chr19	-	917	9	FSM	ENSG00000105669.14	ENST00000351079.8	907	9	0	-10	0	0	multi-exon	FALSE	canonical	3	109	junction_6	917.587019034162	2661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACCCCCATCTGTTAATAA	-1	True	NA	-51	True	NA	NA	NA	18919375	18899562	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18899727_18899872_18899948_18900380_18900450_18903267_18903424_18904770_18904853_18905575_18905630_18910970_18911072_18912983_18913047_18919222
H1_mix_00045283	chr19	-	877	3	FSM	ENSG00000105669.14	ENST00000597646.5	868	3	0	-9	0	9	multi-exon	FALSE	canonical	0	0	junction_1	1554	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGAGATCTCGGCTCACT	9	True	NA	NA	False	NA	NA	NA	18919365	18910545	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18911217_18912983_18913047_18919222
H1_mix_00045285	chr19	-	1560	10	FSM	ENSG00000051128.19	ENST00000392351.8	1560	10	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_9	81.8141525382715	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTGTGTGTGGTATGT	7	True	NA	-16	True	NA	NA	NA	18941217	18929202	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18929635_18931324_18931412_18931508_18931626_18931975_18932133_18932923_18933046_18934302_18934411_18938352_18938485_18938727_18938885_18938968_18939050_18941050
H1_mix_00045288	chr19	-	747	6	FSM	ENSG00000064607.17	ENST00000593795.5	747	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	151.14946245356	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTCTCCATGGCTGTG	NA	False	NA	-8	True	AATAAA	-21	NA	19001674	18990887	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18991150_18993637_18993741_18994365_18994487_18995143_18995281_18998923_18998986_19001612
H1_mix_00045289	chr19	-	6194	11	FSM	ENSG00000064607.17	ENST00000452918.7	6189	11	0	-5	0	0	multi-exon	FALSE	canonical	3	166	junction_1	86.3421102359677	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTCTCCATGGCTGTG	-6	True	NA	-8	True	AATAAA	-21	NA	19033517	18990887	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18993741_18994365_18994487_18995143_18995281_19001612_19001675_19004167_19004647_19008316_19008429_19009854_19010343_19019108_19019230_19024618_19026227_19030950_19031083_19033436
H1_mix_00045290	chr19	-	3640	11	FSM	ENSG00000064607.17	ENST00000337018.10	3640	11	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_1	47.665081558726	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCTGGGGTCTCCATGG	317	False	NA	-13	True	AATAAA	-16	NA	19033559	18990892	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18991150_18994365_18994487_18995143_18995281_19001612_19001675_19004167_19004647_19008316_19008429_19009854_19010343_19019108_19019230_19024618_19026227_19030950_19031083_19033436
H1_mix_00045293	chr19	-	2251	12	FSM	ENSG00000064545.15	ENST00000162044.14	2251	12	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_11	46.749552523602	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	-6	True	NA	NA	False	NA	NA	NA	19138478	19119168	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19120184_19120764_19120862_19120991_19121167_19121307_19121422_19121524_19121669_19121758_19121820_19130155_19130308_19132351_19132509_19132656_19132755_19133129_19133211_19134783_19134888_19138425
H1_mix_00045295	chr19	-	1665	12	FSM	ENSG00000064545.15	ENST00000587583.6	1654	12	0	-11	0	0	multi-exon	FALSE	canonical	3	15	junction_8	108.452830894014	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAATAAAGGAGCATGCC	25	True	NA	-37	True	NA	NA	NA	19138447	19119648	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19120184_19120764_19120862_19120991_19121167_19121307_19121422_19121524_19121669_19121758_19121820_19130155_19130308_19132351_19132434_19132656_19132755_19133129_19133211_19134783_19134888_19138425
H1_mix_00045296	chr19	-	1799	10	FSM	ENSG00000064545.15	ENST00000589448.5	1799	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_9	114.118846432617	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAATAAAGGAGCATGCC	10	True	NA	-37	True	NA	NA	NA	19138462	19119648	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19120184_19120764_19120862_19120991_19121167_19121307_19121422_19121524_19121669_19121758_19121820_19130155_19130308_19132351_19132755_19133129_19133211_19138425
H1_mix_00045299	chr19	-	1430	9	FSM	ENSG00000213999.17	ENST00000424583.7	1425	9	0	-5	0	5	multi-exon	TRUE	canonical	3	19	junction_8	10.6938942859933	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGACTCGCCTCATTCTTG	-3	True	NA	0	True	AATAAA	-31	NA	19170263	19145561	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19146023_19146272_19146385_19146554_19146649_19146741_19146876_19147035_19147184_19147697_19147833_19149225_19149430_19150681_19150765_19170204
H1_mix_00045300	chr19	-	1602	11	NIC	ENSG00000064489.23	novel	1804	13	NA	NA	-1	2	combination_of_known_junctions	FALSE	canonical	3	18	junction_8	36.6099713193004	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTGTGACTCGCCTCAT	14	True	NA	-5	True	AATAAA	-26	NA	19192129	19145566	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_19146023_19146272_19146385_19146554_19146649_19146741_19146876_19147035_19147184_19147697_19147833_19149225_19149430_19150681_19150765_19180685_19180762_19182572_19182684_19192080
H1_mix_00045301	chr19	-	554	7	FSM	ENSG00000064489.23	ENST00000602689.1	554	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	89.5035691405035	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGTGAGTTCACTGGGTG	21	True	NA	NA	False	NA	NA	NA	19192122	19150685	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19150765_19157215_19157284_19180685_19180762_19182572_19182684_19186033_19186099_19186892_19187006_19192080
H1_mix_00045302	chr19	-	3779	1	FSM	ENSG00000254901.8	ENST00000591566.1	3698	1	-84	3	-84	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTTTGAGTCCGTTTCT	1947	False	NA	-5	True	NA	NA	NA	19180685	19176906	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19176900_19180700
H1_mix_00045303	chr19	-	1939	6	FSM	ENSG00000254901.8	ENST00000462790.8	992	6	13	-960	0	957	multi-exon	FALSE	canonical	3	121	junction_1	32.9933326597966	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAGTTTTAGTAGAGACG	4	True	NA	NA	False	NA	NA	NA	19192139	19175945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19177461_19180685_19180762_19182572_19182684_19186033_19186099_19186892_19187006_19192080
H1_mix_00045304	chr19	-	1495	4	FSM	ENSG00000254901.8	ENST00000477565.3	1489	4	0	-6	0	6	multi-exon	FALSE	canonical	3	193	junction_3	9.67241208569794	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATGTGCCAGGAGCAGGA	NA	False	NA	-3	True	AATAAA	-19	NA	19192589	19181875	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19182684_19186033_19186099_19186892_19187006_19192080
H1_mix_00045306	chr19	-	912	6	NIC	ENSG00000184162.15	novel	859	6	NA	NA	9	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	52.2363857861548	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAATGTGTGAATTGTGAC	-1	True	NA	-5	True	TATAAA	-17	NA	19203402	19201413	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_19201564_19201930_19202048_19202330_19202399_19202469_19202576_19202790_19202882_19203022
H1_mix_00045309	chr19	-	4337	5	FSM	ENSG00000187664.9	ENST00000291481.8	4342	5	0	5	0	-5	multi-exon	FALSE	canonical	2	12	junction_4	29.1461832835793	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTCTTCCTCATTCTTC	-3	True	NA	NA	False	AATAAA	-11	NA	19262804	19254760	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19258209_19258522_19258856_19260812_19261176_19261445_19261564_19262729
H1_mix_00045310	chr19	-	3502	4	ISM	ENSG00000187664.9	ENST00000291481.8	4342	5	1121	885	0	-885	3prime_fragment	FALSE	canonical	3	74	junction_3	4.64279609239471	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGCAGCCAGTGGGTAAT	2004	False	NA	-6	True	AATAAA	-29	NA	19261683	19255640	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_19258209_19258522_19258856_19260812_19261176_19261445
H1_mix_00045311	chr19	-	611	3	FSM	ENSG00000187664.9	ENST00000592862.2	611	3	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	5.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTACCACCCCCGTGGAG	2004	False	NA	NA	False	NA	NA	NA	19261683	19258845	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19258856_19260812_19261176_19261445
H1_mix_00045312	chr19	-	1862	10	FSM	ENSG00000213996.13	ENST00000389363.5	1518	10	-84	-260	6	258	multi-exon	FALSE	canonical	3	24	junction_5	11.3311544746506	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTAAGCACCTACTGTA	NA	False	NA	-10	True	AATAAA	-23	NA	19273385	19264105	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19264874_19266489_19266610_19267620_19267714_19267985_19268088_19268629_19268755_19269686_19269770_19270172_19270277_19270344_19270443_19271021_19271126_19273120
H1_mix_00045315	chr19	-	2654	8	FSM	ENSG00000105705.16	ENST00000591007.6	1377	8	-795	-482	436	2	multi-exon	FALSE	canonical	3	287	junction_6	39.0488966109237	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCTAAAGGAATGTCAGG	NA	False	NA	NA	False	AATAAA	-21	NA	19303250	19276030	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19276675_19276946_19277077_19277733_19277880_19278689_19278797_19279212_19279391_19280184_19280292_19296988_19297345_19302264
H1_mix_00045321	chr19	-	1518	1	FSM	ENSG00000178093.14	ENST00000585580.4	1330	1	-197	9	-197	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTCGCACCTGGCTCTAA	417	False	NA	NA	False	AATAAA	-8	NA	19515745	19514227	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19514200_19515700
H1_mix_00045323	chr19	-	1495	8	FSM	ENSG00000105717.14	ENST00000251203.14	1495	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	4.92391083988974	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCGATGTCTGTTTGCCAG	13	True	NA	-4	True	ATTAAA	-19	NA	19618687	19561712	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19562118_19563508_19563616_19564932_19565090_19569448_19569585_19570108_19570300_19570585_19570834_19599291_19599366_19618510
H1_mix_00045324	chr19	-	1410	8	FSM	ENSG00000105717.14	ENST00000557978.6	1416	8	0	6	0	0	multi-exon	TRUE	canonical	2	5	junction_4	6.49646685765833	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCGATGTCTGTTTGCCAG	7	True	NA	-4	True	ATTAAA	-19	NA	19618693	19561712	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19562118_19563508_19563616_19564932_19565090_19569448_19569585_19570098_19570300_19570686_19570834_19599291_19599366_19618510
H1_mix_00045325	chr19	-	1786	3	FSM	ENSG00000064547.14	ENST00000407877.8	1786	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	99.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTTGTTATCAATTCA	0	True	NA	-19	True	AGTAAA	-30	NA	19628220	19623654	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19624570_19626542_19627285_19628091
H1_mix_00045326	chr19	-	2405	5	ISM	ENSG00000064547.14	ENST00000542587.5	2546	6	401	0	0	0	intron_retention	FALSE	canonical	0	0	junction_3	97.7061922295614	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCTCCAAAACATTTG	5	True	NA	-33	True	AGTAAA	-16	NA	19628529	19623668	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_19624570_19626542_19627285_19627396_19627505_19627753_19627970_19628091
H1_mix_00045327	chr19	-	2974	6	FSM	ENSG00000064547.14	ENST00000542587.5	2546	6	-421	-7	-421	6	multi-exon	FALSE	canonical	0	0	junction_3	97.6635039305881	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAAACATTTGTTGTTAT	8197	False	NA	-26	True	AGTAAA	-23	NA	19629351	19623661	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19624570_19626542_19627285_19627396_19627505_19627753_19627970_19628091_19628168_19628427
H1_mix_00045333	chr19	-	3429	21	NIC	ENSG00000089639.11	novel	3528	21	NA	NA	0	6	combination_of_known_junctions	FALSE	canonical	3	14	junction_9	22.3281772655092	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGCATCTCTGCTAGGG	71	False	NA	2	True	AATAAA	-19	NA	19643561	19629469	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_19630337_19630470_19630538_19633802_19634191_19634506_19634704_19634791_19634930_19635024_19635214_19635414_19635570_19635643_19635722_19636706_19636788_19636916_19637030_19637364_19637562_19637919_19638058_19638158_19638330_19638401_19638483_19640084_19640193_19640295_19640361_19640445_19640572_19641809_19641868_19641975_19642052_19642534_19642620_19643510
H1_mix_00045334	chr19	-	3526	21	FSM	ENSG00000089639.11	ENST00000203556.9	3528	21	0	2	0	-2	multi-exon	FALSE	canonical	3	75	junction_9	13.5624481565829	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCCCTTGGGTGCATCTC	-25	True	NA	-6	True	AATAAA	-11	NA	19643657	19629477	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19630337_19630470_19630538_19633802_19634191_19634506_19634704_19634791_19634930_19635024_19635214_19635414_19635570_19635643_19635722_19636706_19636797_19636916_19637030_19637364_19637562_19637919_19638058_19638158_19638330_19638401_19638483_19640084_19640193_19640295_19640361_19640445_19640572_19641809_19641868_19641975_19642052_19642534_19642620_19643510
H1_mix_00045335	chr19	-	3513	19	NIC	ENSG00000089639.11	novel	3528	21	NA	NA	12	0	intron_retention	FALSE	canonical	3	34	junction_6	19.3720079330467	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTTGGGTGCATCTCTG	46	False	NA	-4	True	AATAAA	-13	NA	19643586	19629475	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_19630538_19633802_19634191_19634506_19634704_19634791_19634930_19635024_19635214_19635414_19635570_19636706_19636797_19636916_19637030_19637364_19637562_19637919_19638058_19638158_19638330_19638401_19638483_19640084_19640193_19640295_19640361_19640445_19640572_19641809_19641868_19641975_19642052_19642534_19642620_19643510
H1_mix_00045338	chr19	-	913	8	FSM	ENSG00000089639.11	ENST00000593186.1	910	8	0	-3	0	0	multi-exon	FALSE	canonical	3	14	junction_4	27.0766108873112	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGAGGTACCCTTTGTGG	5445	False	NA	NA	False	NA	NA	NA	19638187	19635091	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19635214_19635414_19635570_19635643_19635722_19636706_19636788_19636916_19637030_19637364_19637562_19637919_19638058_19638158
H1_mix_00045341	chr19	-	1382	4	ISM	ENSG00000089639.11	ENST00000587205.1	594	7	-19	79	3	-79	intron_retention	FALSE	canonical	3	92	junction_2	5.24933858267454	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAGACCCCAGCTAGACC	15	True	NA	NA	False	NA	NA	NA	19643617	19640406	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_19640572_19641809_19641868_19641975_19642052_19642534
H1_mix_00045342	chr19	-	3863	26	FSM	ENSG00000105726.17	ENST00000357324.11	3849	26	0	-14	0	14	multi-exon	FALSE	canonical	3	359	junction_13	56.6870143860126	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTCTGTGCCACACGGTGT	2	True	NA	3	True	AATAAA	-37	NA	19663676	19645183	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19645533_19645646_19645791_19645873_19645986_19646204_19646348_19647128_19647326_19647413_19647529_19647598_19647760_19649566_19649664_19649740_19649941_19651688_19651798_19652594_19652721_19653783_19653895_19653968_19654145_19654542_19654701_19655118_19655240_19655315_19655454_19655527_19655655_19655877_19655934_19656053_19656184_19656659_19656767_19656846_19656917_19656993_19657150_19657335_19657409_19659600_19659792_19659897_19659988_19663270
H1_mix_00045343	chr19	-	3231	24	NIC	ENSG00000105726.17	novel	3849	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_13	99.4669345938877	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGCCCTGCCTCCACCT	3934	False	NA	-16	True	AATAAA	-18	NA	19659744	19645202	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_19645533_19645646_19645791_19645873_19645986_19646204_19646348_19647128_19647326_19647413_19647529_19647598_19647760_19649566_19649664_19649740_19649941_19651688_19651798_19652594_19652721_19653783_19653895_19653968_19654075_19654542_19654701_19655118_19655240_19655315_19655454_19655527_19655655_19655877_19655934_19656053_19656184_19656659_19656767_19656846_19656917_19656993_19657150_19657335_19657409_19659600
H1_mix_00045347	chr19	-	2987	4	FSM	ENSG00000105708.9	ENST00000344099.4	2963	4	0	-24	0	24	multi-exon	FALSE	canonical	3	39	junction_3	1.63299316185545	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGGAACATATTCTCATTA	-7	True	NA	3	True	AATAAA	-39	NA	19733112	19710447	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19713090_19714090_19714152_19714360_19714488_19732955
H1_mix_00045348	chr19	-	1385	3	FSM	ENSG00000081665.14	ENST00000450683.6	1385	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	24	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATACTGGAGAGAAACCG	-17	True	NA	NA	False	TTTAAA	-32	NA	19821749	19794551	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19795661_19806941_19807069_19821600
H1_mix_00045349	chr19	-	3335	4	FSM	ENSG00000081665.14	ENST00000540806.7	3323	4	0	-12	0	12	multi-exon	FALSE	canonical	3	53	junction_1	4.32049379893857	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGTTTTCTACATTATAG	-18	True	NA	NA	False	AATAAA	-28	NA	19821750	19792698	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19795661_19806030_19806127_19806941_19807069_19821600
H1_mix_00045350	chr19	-	2173	2	Intergenic	novelGene_625	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTTACTACCAAATTTT	2	True	NA	NA	False	ATTAAA	-39	NA	19861195	19857765	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_-_19859806_19861062
H1_mix_00045351	chr19	-	2076	1	FSM	ENSG00000270270.1	ENST00000605360.1	577	1	-504	-995	-504	995	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCACTCCAGCCTGGGCA	NA	False	NA	NA	False	NA	NA	NA	19871803	19869727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19869700_19871800
H1_mix_00045352	chr19	-	3776	1	FSM	ENSG00000197124.12	ENST00000601365.1	3769	1	0	-7	0	5	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGCATTGAATTAGGTGT	NA	False	NA	2	True	AATAAA	-28	NA	20008188	20004412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_20004400_20008200
H1_mix_00045354	chr19	-	3249	4	FSM	ENSG00000197124.12	ENST00000397165.7	3244	4	0	-5	0	5	multi-exon	FALSE	canonical	3	79	junction_1	9.7410927974683	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGCATTGAATTAGGTGT	-3	True	NA	2	True	AATAAA	-28	NA	20039505	20004412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_20007276_20023003_20023100_20024249_20024377_20039342
H1_mix_00045355	chr19	-	3220	5	NIC	ENSG00000197124.12	novel	603	6	NA	NA	30	1	intron_retention	FALSE	canonical	2	3	junction_1	47.5526024524421	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTGTGCATTGAATTAG	118	False	NA	-2	True	AATAAA	-24	NA	20039411	20004416	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_20007276_20015773_20015843_20023003_20023100_20024249_20024377_20039342
H1_mix_00045356	chr19	-	709	4	NIC	ENSG00000197124.12	novel	3244	4	NA	NA	6	-1	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	36.8510515453766	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGTTGTGCATTGAATT	3	True	NA	-4	True	AATAAA	-22	NA	20039499	20004418	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_20004748_20023003_20023100_20024249_20024377_20039342
H1_mix_00045358	chr19	-	646	1	FSM	ENSG00000279039.1	ENST00000623510.1	2598	1	1969	-17	1969	17	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTCTTTTTTTCTTAGAG	NA	False	NA	2	True	AATATA	-25	NA	20207820	20207174	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_20207200_20207800
H1_mix_00045359	chr19	-	1590	1	FSM	ENSG00000280079.1	ENST00000624228.1	1590	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCACTCTCTGTCCCTTT	1751	False	NA	-17	True	AATAAA	-20	NA	20222186	20220596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_20220600_20222200
H1_mix_00045360	chr19	-	8165	2	FSM	ENSG00000267383.8_ENSG00000280079.1	ENST00000585816.1	618	2	12	-7559	12	146	multi-exon	FALSE	canonical	3	74	junction_1	0	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTCAGCTTTTTTTT	25	False	NA	-1	True	AATAAA	-18	NA	20238419	20220450	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_20228484_20238287
H1_mix_00045361	chr19	-	1100	3	FSM	ENSG00000231205.12	ENST00000541160.6	1120	3	13	7	0	-7	multi-exon	FALSE	canonical	3	65	junction_1	216.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTATGTCTCTTGATTG	2	True	NA	-8	True	AATAAA	-11	NA	20424956	20340268	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_20341102_20408949_20409046_20424785
H1_mix_00045362	chr19	-	4718	3	NIC	ENSG00000231205.12	novel	737	4	NA	NA	4	1406	combination_of_known_junctions	FALSE	canonical	3	218	junction_1	140	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAGAGGATATGTTTTT	7312	False	NA	-10	True	AATAAA	-23	NA	20424917	20394548	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_20399039_20408949_20409046_20424785
H1_mix_00045363	chr19	-	3330	3	FSM	ENSG00000231205.12	ENST00000615684.4	3330	3	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	70	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCATTAGATTATGTG	2	True	NA	-10	True	AATAAA	-14	NA	20424956	20395954	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_20399039_20408949_20409025_20424785
H1_mix_00045365	chr19	-	4994	3	FSM	ENSG00000231205.12	ENST00000691522.1	938	3	9	-4065	0	-2727	multi-exon	FALSE	canonical	3	78	junction_2	176	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTCATGAGACTATGCT	2	True	NA	NA	False	AATAAA	-9	NA	20424956	20401384	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_20406133_20408949_20409025_20424785
H1_mix_00045366	chr19	-	2413	3	FSM	ENSG00000231205.12	ENST00000597334.2	1464	3	9	-958	0	958	multi-exon	FALSE	canonical	3	430	junction_1	34	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTAATATTGTCTAAGTT	-11	True	NA	NA	False	TATAAA	-41	NA	20424969	20403999	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_20406133_20408949_20409046_20424785
H1_mix_00045367	chr19	-	953	3	FSM	ENSG00000231205.12	ENST00000689878.1	1426	3	43	430	2	57	multi-exon	FALSE	canonical	3	67	junction_2	181.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATGGTTTCTATTCTTGT	11	True	NA	54	True	NA	NA	NA	20424919	20405392	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_20406133_20408949_20409029_20424785
H1_mix_00045368	chr19	-	636	3	FSM	ENSG00000231205.12	ENST00000596724.2	922	3	2	284	0	-284	multi-exon	FALSE	canonical	3	21	junction_1	14	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACAAGTAGCTATAAAGTA	2	True	NA	NA	False	NA	NA	NA	20424956	20415304	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_20415652_20417665_20417784_20424785
H1_mix_00045369	chr19	-	8352	4	FSM	ENSG00000237440.9	ENST00000427401.9	8352	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	5.71547606649408	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGCCTCAGAAAAGCTTT	-1	True	NA	0	True	AATAAA	-16	NA	20565781	20537991	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_20545977_20552474_20552571_20553708_20553836_20565637
H1_mix_00045370	chr19	-	7072	4	FSM	ENSG00000188171.17	ENST00000601440.6	6063	4	64	-1073	30	1073	multi-exon	FALSE	canonical	3	44	junction_1	43.3666538560063	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCATTGTTTTTGACCTT	74	False	NA	NA	False	AATAAA	-17	NA	20661507	20618865	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_20625651_20645683_20645780_20646278_20646406_20661443
H1_mix_00045371	chr19	-	5564	4	FSM	ENSG00000188171.17	ENST00000291750.6	1123	4	59	-4500	0	4500	multi-exon	FALSE	canonical	3	78	junction_1	27.4752413799932	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTAAAATATTTTAAATAAT	44	False	NA	NA	False	ATTAAA	-45	NA	20661537	20640201	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_20645449_20645683_20645780_20646278_20646406_20661443
H1_mix_00045372	chr19	-	442	1	FSM	ENSG00000268521.1	ENST00000595685.1	445	1	27	-24	27	24	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTCTGTAAAGCATGAT	3627	False	NA	NA	False	AATACA	-25	NA	21289971	21289529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_21289500_21290000
H1_mix_00045373	chr19	-	3994	4	FSM	ENSG00000182141.10	ENST00000356929.3	4004	4	11	-1	11	1	multi-exon	FALSE	canonical	3	12	junction_3	7.48331477354788	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGTGAACTTGTTTC	35	False	NA	0	True	AATAAA	-26	NA	21329399	21291158	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_21294740_21309245_21309342_21310500_21310628_21329209
H1_mix_00045374	chr19	-	4732	3	FSM	ENSG00000182141.10	ENST00000601295.1	567	3	0	-4165	0	929	multi-exon	FALSE	canonical	3	21	junction_2	4.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTCGGCTCACTGCAAC	98	False	NA	NA	False	NA	NA	NA	21329336	21290230	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_21294740_21309245_21309342_21329209
H1_mix_00045376	chr19	-	9257	5	FSM	ENSG00000268119.7	ENST00000597444.6	1916	5	13	-7354	11	3544	multi-exon	FALSE	canonical	3	16	junction_1	74.4546842045549	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTCTCTCTAGTCCTCTG	20	True	NA	0	True	AATAAA	-23	NA	21463873	21440696	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_21449378_21453549_21453778_21454382_21454473_21456460_21456589_21463743
H1_mix_00045377	chr19	-	8743	4	NNC	ENSG00000268119.7	novel	1916	5	NA	NA	-33	3541	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	79.3403358254103	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGGTCTCTCTAGTCCT	NA	False	NA	-3	True	AATAAA	-20	NA	21463941	21440699	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_21449027_21454382_21454473_21456460_21456589_21463743
H1_mix_00045378	chr19	-	9035	4	NIC	ENSG00000268119.7	novel	1916	5	NA	NA	5	3544	combination_of_known_splicesites	FALSE	canonical	3	20	junction_1	80.2786812713479	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTCTCTCTAGTCCTCTG	14	True	NA	0	True	AATAAA	-23	NA	21463879	21440696	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_21449378_21454382_21454473_21456460_21456589_21463743
H1_mix_00045379	chr19	-	2090	4	FSM	ENSG00000268119.7	ENST00000599993.7	1736	4	35	-389	11	4	multi-exon	FALSE	canonical	3	81	junction_1	51.7322164827897	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAAACATTACTGAAAGT	20	True	NA	NA	False	AAAAAG	-4	NA	21463873	21452035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_21453778_21454382_21454473_21456460_21456589_21463743
H1_mix_00045381	chr19	-	693	4	NIC	ENSG00000268119.7	novel	1443	5	NA	NA	0	-358	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	85.4413379004696	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTATGTGTGAAGTTAAT	-4	True	NA	NA	False	AATAAA	-23	NA	21463897	21452958	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_21453280_21454382_21454473_21456460_21456589_21463743
H1_mix_00045385	chr19	-	5706	5	FSM	ENSG00000197020.12	ENST00000358296.11	5691	5	0	-15	0	15	multi-exon	FALSE	canonical	3	52	junction_2	20.0296654989543	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTCACATTTAATAATA	-6	True	NA	NA	False	AATAAA	-20	NA	21767579	21722755	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_21727990_21744016_21744116_21744940_21745068_21765693_21765787_21767426
H1_mix_00045386	chr19	-	5252	4	FSM	ENSG00000198521.12	ENST00000354959.9	5235	4	0	-17	0	17	multi-exon	FALSE	canonical	3	38	junction_3	54.3507129668048	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGACTATGTGGCCGCTC	-1	True	NA	-5	True	AATAAA	-18	NA	21836182	21804928	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_21809808_21817887_21817987_21819094_21819222_21836035
H1_mix_00045387	chr19	-	5269	4	FSM	ENSG00000198521.12	ENST00000357491.10	5249	4	0	-20	0	17	multi-exon	FALSE	canonical	3	18	junction_3	63.4787803565535	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGACTATGTGGCCGCTC	-27	True	NA	-5	True	AATAAA	-18	NA	21852068	21804928	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_21809808_21817887_21817987_21819094_21819222_21851904
H1_mix_00045388	chr19	-	5605	7	FSM	ENSG00000198521.12	ENST00000594012.5	5584	7	0	-21	0	17	multi-exon	FALSE	canonical	3	26	junction_6	51.1427740089774	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGACTATGTGGCCGCTC	24	True	NA	-5	True	AATAAA	-18	NA	21852017	21804928	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_21809808_21817887_21817987_21819094_21819222_21843144_21843327_21845391_21845507_21850937_21851028_21851904
H1_mix_00045391	chr19	-	828	6	NIC	ENSG00000198521.12	novel	5584	7	NA	NA	3	68	combination_of_known_junctions	FALSE	canonical	3	34	junction_5	51.6720427310552	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGCAAAATATTTCTATTT	27	True	NA	NA	False	NA	NA	NA	21852014	21809612	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_21809808_21817887_21817987_21819094_21819222_21843144_21843327_21845391_21845507_21851904
H1_mix_00045392	chr19	-	2085	1	Genic_Genomic	ENSG00000198521.12	novel	NA	NA	NA	NA	-409	2325	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTGAAATTTGAGATTAA	4990	False	NA	-43	True	AATAAA	-43	NA	21839356	21837271	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr19_-_21837300_21839400
H1_mix_00045393	chr19	-	6106	3	NIC	ENSG00000198521.12	novel	5584	7	NA	NA	0	2148	intron_retention	FALSE	canonical	3	34	junction_2	12	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CGTCTCAAAAAAAAAAAAAA	24	True	NA	NA	False	NA	NA	NA	21852017	21837448	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_21843327_21845391_21845507_21851904
H1_mix_00045394	chr19	-	401	1	FSM	ENSG00000236312.3	ENST00000465389.1	354	1	-23	-24	-23	24	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACGAGATCATGTGGTAT	9	False	NA	NA	False	AATAAA	-24	NA	22368975	22368574	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_22368600_22369000
H1_mix_00045395	chr19	-	1454	1	FSM	ENSG00000267920.1	ENST00000601728.1	1224	1	24	-254	24	254	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTTCTTTAAAGTAGCC	NA	False	NA	NA	False	NA	NA	NA	23127768	23126314	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_23126300_23127800
H1_mix_00045396	chr19	-	5136	4	FSM	ENSG00000196081.10	ENST00000418100.6	2798	4	4	-2342	0	2342	multi-exon	FALSE	canonical	3	35	junction_3	8.04155872120988	201	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCCTCTCTGCCTGCAA	-18	True	NA	-5	True	AATAAA	-26	NA	23250390	23219256	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_23224019_23231265_23231362_23232166_23232294_23250239
H1_mix_00045397	chr19	-	2897	1	FSM	ENSG00000269837.1	ENST00000593576.1	2887	1	0	-10	0	10	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAGTCGACACAGTTGATG	NA	False	NA	3	True	AATAAA	-30	NA	23257939	23255042	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_23255000_23257900
H1_mix_00045398	chr19	-	6070	5	Fusion	ENSG00000284428.1_ENSG00000269837.1	novel	561	4	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_1	30.0707499075098	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTTTGCCACATGTCCTC	-8	True	NA	-102	True	AATGAA	-13	NA	23274232	23255147	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_-_23257974_23258445_23260935_23261619_23261745_23269819_23270293_23274075
H1_mix_00045399	chr19	-	935	4	FSM	ENSG00000284428.1	ENST00000640838.1	583	4	55	-407	0	407	multi-exon	FALSE	canonical	3	31	junction_3	18.4089350286454	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTTGAAGTTCTGAATTT	28	True	NA	-21	True	AGTAAA	-31	NA	23274196	23259498	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_23260117_23260863_23260935_23261619_23261745_23274075
H1_mix_00045400	chr19	-	556	5	FSM	ENSG00000284428.1	ENST00000639752.1	556	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	18.6731759484026	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTGTACAAAAGTCATAAA	-20	True	NA	-45	True	NA	NA	NA	23274244	23260000	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_23260117_23260863_23260935_23261619_23261745_23270217_23270293_23274075
H1_mix_00045402	chr19	-	579	2	FSM	ENSG00000284428.1	ENST00000638919.1	579	2	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTCCCATCCCAGTAAG	-23	True	NA	-1	True	AATAAA	-19	NA	23274247	23269885	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_23270293_23274075
H1_mix_00045403	chr19	-	3056	1	FSM	ENSG00000167232.14	ENST00000597458.1	2307	1	-749	0	-749	0	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTGTTTCAGTTTCTA	NA	False	NA	NA	False	AATAAA	-14	NA	23340886	23337830	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_23337800_23340900
H1_mix_00045404	chr19	-	753	2	FSM	ENSG00000167232.14	ENST00000593341.1	730	2	0	-23	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATCTCTTGACCTCGTG	3262	False	NA	NA	False	NA	NA	NA	23358980	23338852	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_23339055_23358429
H1_mix_00045405	chr19	-	5411	4	FSM	ENSG00000167232.14	ENST00000300619.12	5400	4	0	-11	0	11	multi-exon	FALSE	canonical	3	54	junction_3	2.94392028877595	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCGAATAAATCTTTTTTAA	-18	True	NA	3	True	AATAAA	-42	NA	23395471	23357684	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_23362726_23373741_23373838_23374637_23374765_23395324
H1_mix_00045406	chr19	-	7025	6	NNC	ENSG00000269416.7	novel	2766	8	NA	NA	-574	366	intron_retention	FALSE	canonical	3	55	junction_4	23.9716499223562	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGGGGTGAGGGATAAAAG	7388	False	NA	NA	False	NA	NA	NA	23408665	23398730	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_23401048_23402176_23402513_23403205_23403510_23403719_23403748_23404476_23405109_23405257
H1_mix_00045407	chr19	-	2787	4	FSM	ENSG00000269416.7	ENST00000601293.5	559	4	28	-2256	0	366	multi-exon	FALSE	canonical	3	28	junction_3	63.8957484240279	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGGGGTGAGGGATAAAAG	6	True	NA	NA	False	NA	NA	NA	23416047	23398730	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_23401048_23403205_23403494_23403719_23403748_23415893
H1_mix_00045410	chr19	-	2711	5	FSM	ENSG00000269416.7	ENST00000600643.5	2387	5	24	-348	0	212	multi-exon	FALSE	canonical	3	56	junction_3	49.0681923449397	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCGATTTAGTTGGAGACC	6	True	NA	-9	True	AATAAA	-20	NA	23416047	23398884	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_23401048_23403205_23403494_23403719_23403748_23405257_23405336_23415893
H1_mix_00045411	chr19	-	2001	2	FSM	ENSG00000269416.7	ENST00000654756.1	2001	2	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTTTTCTTTTCTTTCC	NA	False	NA	NA	False	AATACA	-16	NA	23403419	23400289	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_23401048_23402176
H1_mix_00045413	chr19	-	798	6	FSM	ENSG00000269416.7	ENST00000593573.5	798	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	42.7523098791165	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACAAATAGGATTGTGCC	-6	True	NA	NA	False	NA	NA	NA	23416059	23400983	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_23401048_23403205_23403510_23403719_23403748_23404950_23405109_23405257_23405336_23415893
H1_mix_00045415	chr19	-	4242	1	FSM	ENSG00000197372.10	ENST00000600299.1	4227	1	92	-107	92	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATCATAAAGCTTATCAT	NA	False	NA	96	True	CATAAA	-22	NA	23657042	23652800	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_23652800_23657000
H1_mix_00045416	chr19	-	4007	4	FSM	ENSG00000197372.10	ENST00000359788.9	2311	4	26	-1722	2	1722	multi-exon	FALSE	canonical	3	149	junction_1	3.39934634239519	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGAACATGTTGTTTCT	-8	True	NA	-6	True	ATTAAA	-17	NA	23687186	23651078	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_23654707_23662113_23662210_23663031_23663159_23687030
H1_mix_00045418	chr19	-	6497	4	FSM	ENSG00000196172.9	ENST00000402377.3	6497	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	3.85861230093008	194	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTATTCCATTGTGTATAT	-1	True	NA	NA	False	AATAAA	-22	NA	23758891	23739194	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_23745324_23754822_23754919_23755424_23755552_23758746
H1_mix_00045419	chr19	-	455	1	FSM	ENSG00000279882.1	ENST00000623712.1	366	1	-307	218	-307	-218	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAACAGTTCCTTTACAAA	NA	False	NA	NA	False	NA	NA	NA	27639972	27639517	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_27639500_27640000
H1_mix_00045420	chr19	-	4779	4	FSM	ENSG00000261824.8	ENST00000656191.1	4842	4	3	60	0	-60	multi-exon	TRUE	canonical	3	8	junction_1	32.2593655651606	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACAGCTTGTGGGGCATC	4	True	NA	NA	False	AATAAA	-12	NA	27793911	27712406	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_27715859_27732795_27732968_27746097_27746341_27792999
H1_mix_00045422	chr19	-	1131	5	FSM	ENSG00000261824.8	ENST00000655166.2	1132	5	1	0	0	0	multi-exon	TRUE	canonical	3	9	junction_1	27.5533573271934	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGTGTTGTGTGGACT	15	True	NA	-2	True	AATAAA	-27	NA	27793900	27721701	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_27721816_27732795_27732968_27746097_27746341_27792999_27793233_27793531
H1_mix_00045423	chr19	-	7250	5	FSM	ENSG00000261824.8	ENST00000659734.1	1625	5	16	-5641	0	0	multi-exon	FALSE	canonical	3	16	junction_1	24.8042335096249	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAATATCCTGCAATAAAAA	16	True	NA	-46	True	AATGAA	-2	NA	27793899	27721745	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_27727980_27732795_27732968_27746097_27746341_27792999_27793233_27793531
H1_mix_00045424	chr19	-	1349	5	FSM	ENSG00000261824.8	ENST00000668560.1	1349	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	31.2279922505434	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTGACAGTCTGCAAACA	11	True	NA	NA	False	ATTAAA	-11	NA	27793249	27726482	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_27726987_27727816_27727980_27732795_27732968_27746080_27746341_27792999
H1_mix_00045425	chr19	-	3083	4	FSM	ENSG00000261824.8	ENST00000668513.1	3064	4	0	-19	0	0	multi-exon	TRUE	canonical	3	8	junction_1	32.2593655651606	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTG	-15	True	NA	NA	False	NA	NA	NA	27793398	27727783	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_27730053_27732795_27732968_27746097_27746341_27792999
H1_mix_00045427	chr19	-	3438	5	FSM	ENSG00000261824.8	ENST00000657659.2	3517	5	88	-9	8	0	multi-exon	TRUE	canonical	3	33	junction_1	18.4983107336859	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACTTATGAAAATGCCTTG	81	False	NA	NA	False	AATAAA	-21	NA	27793834	27728220	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_27730708_27732795_27732968_27746097_27746341_27792999_27793233_27793531
H1_mix_00045429	chr19	-	3687	1	FSM	ENSG00000261770.1	ENST00000562493.1	3666	1	-9	-12	-9	12	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATATAGCAGTTCTGGAA	NA	False	NA	NA	False	AATAAA	-25	NA	27760858	27757171	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_27757200_27760900
H1_mix_00045432	chr19	-	379	4	FSM	ENSG00000283269.1	ENST00000586528.1	451	4	72	0	72	0	multi-exon	FALSE	canonical	3	6	junction_2	7.84573486395988	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGAGAAGGTCCTTGAGC	NA	False	NA	NA	False	NA	NA	NA	28727705	28724275	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_28724319_28724818_28724990_28726298_28726338_28727579
H1_mix_00045433	chr19	-	1265	3	NNC	ENSG00000169021.6	novel	3086	2	NA	NA	0	1801	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1646	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGGTCAGAGGAGATATT	-7	True	NA	NA	False	NA	NA	NA	29213151	29203518	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_29203645_29207266_29208159_29212904
H1_mix_00045436	chr19	-	1912	2	FSM	ENSG00000131943.20	ENST00000392276.1	1912	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTTTCCCACATATTAT	294	False	NA	-15	True	AATAAA	-15	NA	29715221	29701162	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_29702978_29715124
H1_mix_00045439	chr19	-	5228	2	FSM	ENSG00000121297.8	ENST00000240587.5	5065	2	-163	0	-163	0	multi-exon	FALSE	canonical	3	23	junction_1	0	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTTGCGTTCACAAT	1275	False	NA	0	True	ATTAAA	-19	NA	31349599	31274944	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_31279753_31349179
H1_mix_00045441	chr19	-	4437	29	FSM	ENSG00000105186.16	ENST00000306065.9	4432	29	0	-5	0	5	multi-exon	FALSE	canonical	3	281	junction_13	22.0923386849701	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGTATTTTTTTTTAGT	-7	True	NA	-7	True	AGTAAA	-21	NA	32675180	32597000	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_32598379_32599703_32599777_32599971_32600051_32602014_32602127_32604262_32604425_32605834_32605955_32607634_32607833_32615657_32615781_32617588_32617634_32619259_32619380_32619493_32619554_32622421_32622620_32625873_32625967_32626711_32626828_32628082_32628166_32628721_32628850_32631401_32631495_32639355_32639489_32640306_32640386_32642023_32642146_32643122_32643200_32643286_32643353_32643430_32643485_32643571_32643632_32644324_32644480_32646458_32646616_32649681_32649793_32658913_32659046_32675070
H1_mix_00045442	chr19	-	4245	28	NIC	ENSG00000105186.16	novel	4432	29	NA	NA	2	5	combination_of_known_junctions	FALSE	canonical	3	40	junction_25	58.4201470406136	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGTATTTTTTTTTAGT	28	True	NA	-7	True	AGTAAA	-21	NA	32675145	32597000	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_32598379_32599703_32599777_32599971_32600051_32602014_32602127_32604262_32604425_32605834_32605955_32607634_32607833_32615657_32615781_32617588_32617634_32619259_32619380_32619493_32619554_32622421_32622620_32625873_32625967_32626711_32626828_32628082_32628166_32628721_32628850_32631401_32631495_32639355_32639489_32640306_32640386_32642023_32642146_32643122_32643200_32643286_32643353_32643430_32643485_32643571_32643632_32644324_32644480_32649681_32649793_32658913_32659046_32675070
H1_mix_00045449	chr19	-	2898	2	FSM	ENSG00000121289.18	ENST00000591863.1	2903	2	5	0	5	0	multi-exon	FALSE	canonical	3	134	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCTGTGTACCTCATTC	-36	True	NA	-1	True	AATAAA	-19	NA	32971986	32968908	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_32971656_32971835
H1_mix_00045451	chr19	-	1946	11	FSM	ENSG00000130876.11	ENST00000253188.8	1946	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_7	3.9496835316263	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGTGCTATGGGGAGTCC	-2	True	NA	-7	True	AATAAA	-16	NA	33225850	33208663	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_33209022_33209307_33209486_33210466_33210617_33210801_33210899_33211224_33211329_33211413_33211538_33212291_33212446_33212513_33212640_33212850_33213003_33215768_33215974_33225552
H1_mix_00045455	chr19	-	1754	13	FSM	ENSG00000124299.15	ENST00000397032.8	1754	13	0	0	0	0	multi-exon	FALSE	canonical	1	17	junction_6	217.603040726304	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGCAATAAAAGGTTTCC	-8	True	NA	-31	True	NA	NA	NA	33521791	33386979	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_33387482_33387889_33388082_33391294_33391480_33401720_33401870_33411671_33411750_33413574_33413644_33478045_33478091_33489995_33490058_33493289_33493338_33500937_33501002_33511027_33511156_33512592_33512777_33521743
H1_mix_00045456	chr19	-	1804	16	FSM	ENSG00000124299.15	ENST00000651901.1	1804	16	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	260.314032575187	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAATGATTGAAAATAAT	27	False	NA	-25	True	ATTAAA	-9	NA	33521756	33387107	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_33387482_33387654_33387745_33387889_33388082_33391294_33391480_33401720_33401870_33411671_33411750_33413574_33413644_33462994_33463042_33463986_33464063_33478045_33478091_33489995_33490058_33493289_33493338_33500937_33501002_33511027_33511156_33512592_33512777_33521743
H1_mix_00045458	chr19	-	617	3	FSM	ENSG00000268751.2	ENST00000687185.1	712	3	96	-1	-36	0	multi-exon	FALSE	canonical	3	19	junction_1	11.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTGTGTGTTCTTCAG	97	False	NA	0	True	AATAAA	-20	NA	34577701	34576727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_34576995_34577265_34577457_34577542
H1_mix_00045459	chr19	-	652	3	FSM	ENSG00000268751.2	ENST00000690771.1	659	3	5	2	3	-1	multi-exon	FALSE	canonical	3	8	junction_1	17	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTCTGTGTGTGTTCTTC	6	True	NA	-2	True	AATAAA	-18	NA	34577792	34576729	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_34576941_34577265_34577457_34577542
H1_mix_00045460	chr19	-	1184	1	FSM	ENSG00000274104.1	ENST00000612269.1	540	1	-650	6	-650	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	354	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTACCTCTGAGAGAGAC	3	True	NA	-5	True	ATTAAA	-17	NA	34734487	34733303	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_34733300_34734500
H1_mix_00045461	chr19	-	3095	4	FSM	ENSG00000153896.19	ENST00000329285.13	3102	4	0	7	0	-1	multi-exon	FALSE	canonical	2	6	junction_1	12.1197726417986	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGCATGTTTGTGTAATG	-3	True	NA	NA	False	AATAAA	-12	NA	34773215	34758079	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_34760560_34767315_34767412_34769428_34769556_34772823
H1_mix_00045462	chr19	-	948	3	FSM	ENSG00000153896.19	ENST00000588760.1	948	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	4.5	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCGTTTTGTTTTGTTTT	12	True	NA	3	True	AATAAA	-30	NA	34773200	34766967	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_34767412_34769428_34769556_34772823
H1_mix_00045463	chr19	-	654	3	FSM	ENSG00000153896.19	ENST00000588788.1	1386	3	732	0	718	0	multi-exon	FALSE	canonical	2	8	junction_2	13.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAATGACCTTCTCTGAAA	739	False	NA	-52	True	NA	NA	NA	34772473	34767022	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_34767412_34769428_34769556_34772335
H1_mix_00045464	chr19	-	2757	1	FSM	ENSG00000261754.2	ENST00000561778.2	2757	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGATTGTAATTTGAC	NA	False	NA	NA	False	NA	NA	NA	34814345	34811588	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_34811600_34814300
H1_mix_00045465	chr19	-	1136	3	FSM	ENSG00000271109.2	ENST00000657506.1	1142	3	0	6	0	-1	multi-exon	FALSE	canonical	2	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTACGGGTCTCATATTT	NA	False	NA	-6	True	AATAAA	-14	NA	34860685	34849051	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_34849550_34850668_34850795_34860173
H1_mix_00045466	chr19	-	1024	2	FSM	ENSG00000271109.2	ENST00000655389.1	1046	2	16	6	-8	-1	multi-exon	FALSE	canonical	3	55	junction_1	0	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTACGGGTCTCATATTT	NA	False	NA	-6	True	AATAAA	-14	NA	34860699	34849051	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_34849550_34860173
H1_mix_00045467	chr19	-	4068	4	FSM	ENSG00000180884.10	ENST00000404801.2	4068	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	3.29983164553722	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTCTGGTTTCTTTCA	-4	True	NA	-1	True	CATAAA	-15	NA	34964229	34956353	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_34959572_34960234_34960358_34960867_34960995_34963629
H1_mix_00045469	chr19	-	2790	8	FSM	ENSG00000153902.14	ENST00000392225.7	2891	8	101	0	-40	0	multi-exon	FALSE	canonical	2	5	junction_5	2.16653584115759	1268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGCCCAGTGTTGTGGATC	-8	True	NA	-3	True	AATAAA	-17	NA	35135099	35124512	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35125508_35126269_35127018_35131385_35131556_35131788_35131861_35131970_35132043_35133692_35133765_35134032_35134105_35134510
H1_mix_00045471	chr19	-	833	6	FSM	ENSG00000188508.11	ENST00000338897.4	426	6	-407	0	-340	0	multi-exon	TRUE	canonical	2	3	junction_5	4.33589667773576	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTGTATCTGCGTCTCT	NA	False	NA	0	True	AATAAA	-18	NA	35490871	35487323	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35487467_35487711_35487760_35488440_35488486_35488661_35488704_35488801_35488841_35490355
H1_mix_00045472	chr19	-	609	2	FSM	ENSG00000161249.21	ENST00000472365.6	606	2	0	-3	0	3	multi-exon	FALSE	canonical	3	307	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTCAAATTTTATTCTT	3977	False	NA	-7	True	AATAAA	-24	NA	35497933	35497216	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35497539_35497646
H1_mix_00045473	chr19	-	926	14	FSM	ENSG00000161249.21	ENST00000434389.5	923	14	0	-3	0	3	multi-exon	FALSE	canonical	3	28	junction_11	550.761635100181	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTCAAATTTTATTCTT	3473	False	NA	-7	True	AATAAA	-24	NA	35510211	35497216	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500377_35500420_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35507457_35507512_35508204_35508241_35509910_35509962_35510183
H1_mix_00045474	chr19	-	930	9	NIC	ENSG00000161249.21	novel	848	11	NA	NA	1	3	intron_retention	FALSE	canonical	3	33	junction_2	511.223028017127	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTCAAATTTTATTCTT	19	True	NA	-7	True	AATAAA	-24	NA	35510422	35497216	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35497539_35498715_35498764_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35510183
H1_mix_00045475	chr19	-	931	10	ISM	ENSG00000161249.21	ENST00000436012.5	848	11	37	-2	-4	0	intron_retention	FALSE	canonical	3	625	junction_1	359.698364717227	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	39	True	NA	-10	True	AATAAA	-21	NA	35510402	35497219	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35510183
H1_mix_00045476	chr19	-	860	11	NIC	ENSG00000161249.21	novel	970	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_3	527.25644614362	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	-5	True	NA	-10	True	AATAAA	-21	NA	35510446	35497219	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35497539_35497646_35497682_35498715_35498764_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35510183_35510253_35510378
H1_mix_00045477	chr19	-	956	10	NIC	ENSG00000161249.21	novel	970	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_2	542.77321731281	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	-18	True	NA	-10	True	AATAAA	-21	NA	35510459	35497219	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35497539_35498597_35498764_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35510183_35510253_35510378
H1_mix_00045479	chr19	-	938	13	FSM	ENSG00000161249.21	ENST00000402589.6	935	13	0	-3	0	3	multi-exon	FALSE	canonical	3	250	junction_5	430.608959949615	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTCAAATTTTATTCTT	10	True	NA	-7	True	AATAAA	-24	NA	35510431	35497216	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500377_35500420_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510370
H1_mix_00045480	chr19	-	924	12	NIC	ENSG00000161249.21	novel	630	12	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_2	542.3631487518	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	7	True	NA	-10	True	AATAAA	-21	NA	35510434	35497219	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35497539_35498715_35498764_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35506125_35506186_35509910_35509962_35510183_35510253_35510378
H1_mix_00045481	chr19	-	838	10	NIC	ENSG00000161249.21	novel	970	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_2	482.454014951902	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	-18	True	NA	-10	True	AATAAA	-21	NA	35510459	35497219	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35497539_35498715_35498764_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35510183_35510253_35510378
H1_mix_00045482	chr19	-	930	12	NIC	ENSG00000161249.21	novel	970	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_3	508.624526631295	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	-16	True	NA	-10	True	AATAAA	-21	NA	35510457	35497219	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35497539_35497646_35497682_35498715_35498764_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510370
H1_mix_00045483	chr19	-	897	11	NIC	ENSG00000161249.21	novel	935	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_2	463.151605848452	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	-18	True	NA	-10	True	AATAAA	-21	NA	35510459	35497219	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35497539_35498715_35498764_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510370
H1_mix_00045484	chr19	-	935	11	NIC	ENSG00000161249.21	novel	970	14	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_2	462.735518411976	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	0	True	NA	-10	True	AATAAA	-21	NA	35510505	35497219	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35497539_35498715_35498764_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510378
H1_mix_00045485	chr19	-	1074	11	NNC	ENSG00000161249.21	novel	848	11	NA	NA	-2	0	intron_retention	FALSE	canonical	3	18	junction_6	529.700151028863	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGACTTTCTCAAATTTTAT	21	True	NA	-11	True	AATAAA	-20	NA	35510420	35497220	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35500911_35501038_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35510183
H1_mix_00045486	chr19	-	932	12	NIC	ENSG00000161249.21	novel	842	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_2	542.130721328597	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGACTTTCTCAAATTTTAT	6	True	NA	-11	True	AATAAA	-20	NA	35510435	35497220	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35497539_35498715_35498764_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35506125_35506186_35509910_35509962_35510183_35510253_35510370
H1_mix_00045487	chr19	-	853	11	FSM	ENSG00000161249.21	ENST00000436012.5	848	11	0	-5	0	3	multi-exon	FALSE	canonical	3	625	junction_1	347.703839495626	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTCAAATTTTATTCTT	2	True	NA	-7	True	AATAAA	-24	NA	35510439	35497216	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35510183_35510253_35510370
H1_mix_00045488	chr19	-	867	12	FSM	ENSG00000161249.21	ENST00000414866.6	867	12	0	0	0	0	multi-exon	FALSE	canonical	3	625	junction_1	337.844895704699	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAGGAGGAGCTTCCTAC	-29	True	NA	-75	True	NA	NA	NA	35510470	35497284	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510370
H1_mix_00045489	chr19	-	753	2	FSM	ENSG00000161249.21	ENST00000601368.5	752	2	0	-1	0	0	multi-exon	FALSE	canonical	3	103	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGTACCTCCTCCCT	2762	False	NA	-127	True	NA	NA	NA	35499148	35497336	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35497539_35498597
H1_mix_00045490	chr19	-	648	13	FSM	ENSG00000161249.21	ENST00000493979.5	648	13	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_9	517.908346674926	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGTCAGAGTGAGCCG	6	True	NA	NA	False	NA	NA	NA	35510435	35498715	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35498764_35498873_35498898_35499957_35500030_35500377_35500420_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35508204_35508241_35509910_35509962_35510183_35510253_35510378
H1_mix_00045492	chr19	-	630	12	FSM	ENSG00000161249.21	ENST00000460051.5	630	12	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_9	482.855401588276	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGTCAGAGTGAGCCG	6	True	NA	NA	False	NA	NA	NA	35510435	35498715	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35506125_35506186_35509910_35509962_35510183_35510253_35510378
H1_mix_00045500	chr19	-	2809	3	FSM	ENSG00000161249.21	ENST00000489395.6	2811	3	0	2	0	0	multi-exon	FALSE	canonical	3	1105	junction_1	444	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCCTGGCCTCTGCTCCT	5127	False	NA	-5	True	AATAAA	-15	NA	35508557	35503305	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35503448_35505717_35505766_35505938
H1_mix_00045501	chr19	-	507	8	NIC	ENSG00000161249.21	novel	510	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_4	648.025352237748	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCCTGGCCTCTGCTCCT	10	True	NA	-5	True	AATAAA	-15	NA	35510431	35503305	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35503448_35505717_35505766_35505938_35505987_35506125_35506186_35508204_35508241_35509910_35509962_35510183_35510253_35510378
H1_mix_00045502	chr19	-	449	3	FSM	ENSG00000161249.21	ENST00000476051.5	449	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	520.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	1	True	NA	-3	True	AATAAA	-17	NA	35510440	35503303	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35503448_35505717_35505766_35510183
H1_mix_00045503	chr19	-	481	7	NIC	ENSG00000161249.21	novel	510	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	131	junction_3	633.015644005388	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCCTGGCCTCTGCTCCT	-16	True	NA	-5	True	AATAAA	-15	NA	35510457	35503305	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35503448_35505717_35505766_35505938_35505987_35508204_35508241_35509910_35509962_35510183_35510253_35510370
H1_mix_00045504	chr19	-	806	5	FSM	ENSG00000161249.21	ENST00000474928.5	577	5	0	-229	0	229	multi-exon	FALSE	canonical	3	774	junction_3	454.367348628838	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGCCTCTCTCTCTCCCT	-28	True	NA	NA	False	AAAACA	-30	NA	35510469	35503074	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35509910_35509962_35510183
H1_mix_00045505	chr19	-	458	6	FSM	ENSG00000161249.21	ENST00000392206.6	458	6	0	0	0	0	multi-exon	FALSE	canonical	3	774	junction_3	436.577599058861	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCCTGGCCTCTGCTCCT	-29	True	NA	-5	True	AATAAA	-15	NA	35510470	35503305	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510370
H1_mix_00045506	chr19	-	643	5	FSM	ENSG00000161249.21	ENST00000488892.5	414	5	0	-229	0	229	multi-exon	FALSE	canonical	3	841	junction_4	466.4672416151	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGCCTCTCTCTCTCCCT	3209	False	35510505	NA	False	AAAACA	-30	NA	35510475	35503074	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35510183_35510253_35510370
H1_mix_00045507	chr19	-	670	5	FSM	ENSG00000161249.21	ENST00000480507.1	441	5	0	-229	0	229	multi-exon	FALSE	canonical	3	866	junction_4	461.701472815498	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGCCTCTCTCTCTCCCT	-5	True	NA	NA	False	AAAACA	-30	NA	35510510	35503074	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35510183_35510253_35510378
H1_mix_00045508	chr19	-	796	4	FSM	ENSG00000161249.21	ENST00000461300.5	567	4	0	-229	0	229	multi-exon	FALSE	canonical	3	878	junction_3	481.121144365487	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGCCTCTCTCTCTCCCT	-5	True	NA	NA	False	AAAACA	-30	NA	35510510	35503074	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35510183
H1_mix_00045509	chr19	-	580	8	FSM	ENSG00000161249.21	ENST00000462538.5	582	8	0	2	0	0	multi-exon	FALSE	canonical	3	28	junction_4	671.590375640584	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCCTGGCCTCTGCTCCT	-5	True	NA	-5	True	AATAAA	-15	NA	35510510	35503305	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35507457_35507512_35508204_35508241_35509910_35509962_35510183_35510253_35510378
H1_mix_00045510	chr19	-	1609	13	FSM	ENSG00000161249.21	ENST00000447113.6	1611	13	0	2	0	0	multi-exon	FALSE	canonical	3	26	junction_4	616.418012931701	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCCTGGCCTCTGCTCCT	26	False	NA	-5	True	AATAAA	-15	NA	35513658	35503305	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35506125_35506186_35507457_35507512_35508204_35508241_35509910_35509962_35510183_35510253_35511410_35511594_35511762_35511814_35512420_35512478_35512589_35512791_35513049
H1_mix_00045511	chr19	-	1473	10	FSM	ENSG00000161249.21	ENST00000418261.5	1257	10	-200	-16	-23	0	multi-exon	FALSE	canonical	3	28	junction_6	671.547466676779	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCCCACACTCCTGGCC	3	True	NA	-14	True	AATAAA	-6	NA	35513681	35503314	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35511410_35511594_35511762_35511814_35512420_35512478_35512589_35512791_35513049
H1_mix_00045513	chr19	-	4434	1	FSM	ENSG00000236144.9	ENST00000588286.1	3911	1	332	-855	0	11	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCGCTGTCATTTTTTGCA	811	False	NA	-1	True	ATTAAA	-35	NA	35545160	35540726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35540700_35545200
H1_mix_00045514	chr19	-	3779	3	FSM	ENSG00000236144.9	ENST00000590717.2	3767	3	0	-12	0	11	multi-exon	FALSE	canonical	3	74	junction_2	15.5	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCGCTGTCATTTTTTGCA	-15	True	NA	-1	True	ATTAAA	-35	NA	35545507	35540726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35541585_35541750_35542075_35542910
H1_mix_00045515	chr19	-	1421	4	FSM	ENSG00000236144.9	ENST00000444728.3	1547	4	4	122	4	0	multi-exon	FALSE	canonical	3	13	junction_3	38.2186690854963	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACCTGGCCTCGTGTTTT	-11	True	NA	-134	True	NA	NA	NA	35545503	35540859	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35541585_35541750_35542075_35542910_35543098_35545318
H1_mix_00045516	chr19	-	4603	2	FSM	ENSG00000236144.9	ENST00000670097.1	4435	2	8	-176	0	0	multi-exon	FALSE	canonical	3	105	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGAAGTGCTACCGCTG	-15	True	NA	-13	True	ATTAAA	-23	NA	35545507	35540738	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35541585_35541750
H1_mix_00045520	chr19	-	993	2	NIC	ENSG00000126246.10	novel	329	3	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	3	68	junction_1	0	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAGGGATTTAGAAACC	30	True	NA	-15	True	AATAAA	-13	NA	35740549	35738803	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35739627_35740379
H1_mix_00045521	chr19	-	782	2	FSM	ENSG00000126246.10	ENST00000592889.1	782	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGCCTATTCCAACATACA	4082	False	NA	77	True	NA	NA	NA	35741335	35739156	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35739627_35741023
H1_mix_00045522	chr19	-	886	3	FSM	ENSG00000126246.10	ENST00000591748.1	329	3	-58	-499	-11	128	multi-exon	FALSE	canonical	3	24	junction_2	51	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTAACAGACCCCATGACT	-28	True	NA	NA	False	NA	NA	NA	35740607	35739028	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35739627_35739709_35739770_35740379
H1_mix_00045523	chr19	-	981	3	ISM	ENSG00000126246.10	ENST00000592537.5	1195	5	1851	-12	0	12	3prime_fragment	FALSE	canonical	3	64	junction_2	31	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAATTAGCACTGAAGTAC	-17	True	NA	-8	True	AATAAA	-28	NA	35740596	35739241	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_35739627_35739709_35740089_35740379
H1_mix_00045526	chr19	-	1765	3	FSM	ENSG00000161265.15	ENST00000590135.5	1763	3	0	-2	0	0	multi-exon	FALSE	canonical	3	103	junction_2	20.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTTTGCTGTGGTTTG	24	True	NA	-5	True	AATAAA	-26	NA	35744660	35742526	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35743905_35744069_35744422_35744625
H1_mix_00045527	chr19	-	602	5	NIC	ENSG00000161265.15	novel	723	7	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	103	junction_4	16.2018517460196	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTTTGCTGTGGTTTG	5	True	NA	-5	True	AATAAA	-26	NA	35744679	35742526	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35742804_35743808_35743905_35744069_35744146_35744322_35744422_35744625
H1_mix_00045528	chr19	-	723	7	FSM	ENSG00000161265.15	ENST00000591084.5	723	7	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_2	49.2126903236237	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTTTGCTGTGGTTTG	-15	True	NA	-5	True	AATAAA	-26	NA	35744699	35742526	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35742804_35743154_35743206_35743295_35743346_35743808_35743905_35744069_35744146_35744322_35744422_35744625
H1_mix_00045529	chr19	-	706	6	FSM	ENSG00000161265.15	ENST00000594792.5	702	6	0	-4	0	0	multi-exon	FALSE	canonical	3	17	junction_2	43.3331282046427	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTTTGCTGTGGTTTG	9992	False	NA	-5	True	AATAAA	-26	NA	35745157	35742526	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35742804_35743808_35743905_35744011_35744146_35744322_35744422_35744625_35744693_35745124
H1_mix_00045530	chr19	-	800	7	NIC	ENSG00000161265.15	novel	1036	8	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	53	junction_5	30.7503387515216	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTTTGCTGTGGTTTG	19	True	NA	-5	True	AATAAA	-26	NA	35745398	35742526	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35742804_35743808_35743905_35744069_35744146_35744322_35744422_35744625_35744739_35745124_35745213_35745347
H1_mix_00045532	chr19	-	734	6	FSM	ENSG00000161265.15	ENST00000292879.9	729	6	0	-5	0	0	multi-exon	FALSE	canonical	3	47	junction_4	35.1761282690406	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTTTGCTGTGGTTTG	9864	False	NA	-5	True	AATAAA	-26	NA	35745445	35742526	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35742804_35743808_35743905_35744069_35744146_35744322_35744422_35745124_35745213_35745347
H1_mix_00045533	chr19	-	455	6	FSM	ENSG00000161265.15	ENST00000601236.1	455	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	42.130274150544	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCCAGAGGCAGCTCTAT	1	True	NA	NA	False	NA	NA	NA	35745416	35743848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35743905_35744069_35744146_35744322_35744422_35744625_35744693_35745124_35745213_35745347
H1_mix_00045534	chr19	-	2600	11	NIC	ENSG00000167604.15	novel	1834	12	NA	NA	0	185	intron_retention	FALSE	canonical	3	36	junction_6	9.28224110869783	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCCTTTAGGAGGCCAAG	8938	False	NA	NA	False	NA	NA	NA	35900521	35887467	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35888613_35889889_35890055_35890373_35890491_35895979_35896129_35896217_35896539_35896725_35896832_35896912_35897059_35897650_35897857_35898471_35898533_35898718_35898823_35900441
H1_mix_00045535	chr19	-	2324	12	NIC	ENSG00000167604.15	novel	1834	12	NA	NA	0	22	combination_of_known_junctions	FALSE	canonical	3	4	junction_9	16.1024611845006	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTGTTGTCTGATCTCT	8911	False	NA	NA	False	TTTAAA	-17	NA	35900548	35887630	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35888613_35889889_35890055_35890373_35890491_35895979_35896129_35896217_35896270_35896391_35896539_35896725_35896832_35896912_35897059_35897650_35897839_35898471_35898533_35898718_35898823_35900441
H1_mix_00045536	chr19	-	1783	12	FSM	ENSG00000167604.15	ENST00000396901.5	1834	12	51	0	-51	0	multi-exon	FALSE	canonical	3	36	junction_5	9.698768772503	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCGTTCCCAGAAACCCAG	8860	False	NA	NA	False	NA	NA	NA	35900599	35888240	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35888613_35889889_35890055_35890373_35890491_35895979_35896129_35896217_35896270_35896391_35896539_35896725_35896832_35896912_35897059_35897650_35897857_35898471_35898533_35898718_35898823_35900441
H1_mix_00045537	chr19	-	1399	7	FSM	ENSG00000167604.15	ENST00000586361.5	1399	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_6	8.71779788708135	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAACCCCACTCTGGTTCA	8	True	NA	NA	False	NA	NA	NA	35900532	35890445	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35890491_35895979_35896539_35896725_35897059_35897650_35897857_35898471_35898533_35898718_35898823_35900441
H1_mix_00045539	chr19	-	551	1	FSM	ENSG00000280194.1	ENST00000624076.1	2295	1	1636	108	1636	-108	mono-exon	FALSE	NA	NA	NA	NA	NA	424	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCCGAGATCTCACCACT	7240	False	NA	NA	False	NA	NA	NA	35902219	35901668	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35901700_35902200
H1_mix_00045541	chr19	-	1195	7	NIC	ENSG00000181392.17	novel	1377	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_6	60.3759057903068	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGAAGATACTAGGTGC	-5	True	NA	-32	True	AATAAA	-18	NA	36008782	36003306	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_36003521_36003612_36003672_36005332_36005438_36006422_36006672_36006749_36006945_36007124_36007269_36008553
H1_mix_00045543	chr19	-	1377	8	FSM	ENSG00000181392.17	ENST00000324444.9	1377	8	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_6	44.490310800241	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGAAGATACTAGGTGC	-36	True	NA	-32	True	AATAAA	-18	NA	36008813	36003306	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36003521_36003612_36003672_36005332_36005438_36006422_36006672_36006749_36006945_36007124_36007269_36008216_36008368_36008553
H1_mix_00045545	chr19	-	1007	6	FSM	ENSG00000181392.17	ENST00000340477.9	1004	6	0	-3	0	0	multi-exon	FALSE	canonical	3	11	junction_4	68.7092424641693	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGAAGATACTAGGTGC	-5	True	NA	-32	True	AATAAA	-18	NA	36008782	36003306	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36003521_36003612_36003672_36005332_36005438_36006422_36006672_36008216_36008368_36008553
H1_mix_00045547	chr19	-	1093	7	NIC	ENSG00000181392.17	novel	1377	8	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	68.1884643225426	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGATGTGTGAAGATACTAG	-5	True	NA	-36	True	AATAAA	-14	NA	36008782	36003310	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_36003521_36003612_36003672_36005332_36005438_36006749_36006945_36007124_36007269_36008216_36008368_36008553
H1_mix_00045549	chr19	-	981	7	ISM	ENSG00000239382.11	ENST00000252984.11	955	8	644	-84	5	0	3prime_fragment	FALSE	canonical	3	71	junction_6	86.3243238542237	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGTTTTATATTTTTAT	4302	False	NA	-9	True	AATAAA	-14	NA	36013583	36009120	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_36009554_36010566_36010684_36010893_36011046_36011403_36011465_36013020_36013090_36013343_36013423_36013513
H1_mix_00045550	chr19	-	978	7	FSM	ENSG00000239382.11	ENST00000490986.5	977	7	0	-1	0	0	multi-exon	FALSE	canonical	3	67	junction_3	88.9976591452457	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTTTATATTTTTATT	5	True	NA	-8	True	AATAAA	-15	NA	36014208	36009119	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36009554_36010566_36010684_36010893_36011078_36011403_36011465_36013020_36013090_36013343_36013423_36014174
H1_mix_00045557	chr19	-	3351	14	FSM	ENSG00000105270.15	ENST00000360535.9	3350	14	0	-1	0	1	multi-exon	FALSE	canonical	3	99	junction_13	12.5382255758826	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTCGGGTCATTGGG	-23	True	NA	-3	True	AATAAA	-17	NA	36032873	36014658	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36016213_36016906_36016980_36017385_36017451_36017654_36017779_36017847_36017992_36018897_36019027_36019170_36019307_36024395_36024633_36026146_36026266_36026585_36026748_36026951_36027046_36027131_36027272_36032191_36032416_36032723
H1_mix_00045558	chr19	-	1751	4	FSM	ENSG00000161277.11	ENST00000292894.2	1349	4	-116	-286	0	286	multi-exon	FALSE	canonical	3	113	junction_3	13.9124245031395	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGCAGAGAGGGAGCCACG	-1	True	NA	NA	False	NA	NA	NA	36054401	36034697	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36035593_36039322_36039719_36039943_36040137_36054134
H1_mix_00045560	chr19	-	842	3	FSM	ENSG00000161277.11	ENST00000607730.1	842	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	53	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGCACCCCAGCCTG	-1	True	NA	NA	False	NA	NA	NA	36054401	36039322	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36039719_36039943_36040137_36054148
H1_mix_00045562	chr19	-	543	5	FSM	ENSG00000105258.9	ENST00000589591.5	542	5	0	-1	0	0	multi-exon	FALSE	canonical	3	2255	junction_1	89.6447851244009	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTGTGTTTATTTGCC	-1	True	NA	-3	True	AATAAA	-20	NA	36114891	36113708	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36113818_36114014_36114067_36114176_36114252_36114338_36114413_36114658
H1_mix_00045563	chr19	-	495	6	FSM	ENSG00000105258.9	ENST00000592962.5	493	6	0	-2	0	0	multi-exon	FALSE	canonical	3	22	junction_2	945.311250329753	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGAGTTTTCTGTGTTTAT	-16	True	NA	-8	True	AATAAA	-15	NA	36114906	36113713	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36113818_36114014_36114067_36114150_36114252_36114338_36114413_36114658_36114714_36114797
H1_mix_00045564	chr19	-	340	4	FSM	ENSG00000161281.11	ENST00000292907.8	340	4	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_3	1.24721912892465	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGTGTTTGTGTC	19	True	NA	-4	True	AATAAA	-13	NA	36152447	36150921	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36151035_36151461_36151547_36151668_36151756_36152392
H1_mix_00045565	chr19	-	3541	2	Intergenic	novelGene_642	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	218	junction_1	0	305	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGTGGTCTCTTCACA	9	False	NA	2	True	AATAAA	-25	NA	36160687	36155509	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_-_36158795_36160431
H1_mix_00045567	chr19	-	821	3	Intergenic	novelGene_643	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_1	101	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	11	False	NA	-5	True	AATAAA	-18	NA	36160685	36155516	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_-_36155915_36158625_36158795_36160431
H1_mix_00045568	chr19	-	2038	6	FSM	ENSG00000232677.10	ENST00000585356.6	2038	6	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	330.792019250767	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGACAATTGTGCCTTCT	22	True	NA	NA	False	AAGAAA	-20	NA	36331707	36312585	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36313913_36315956_36316071_36321299_36321358_36321992_36322031_36330252_36330493_36331446
H1_mix_00045570	chr19	-	4062	5	FSM	ENSG00000232677.10	ENST00000666182.3	3595	5	14	-481	7	0	multi-exon	FALSE	canonical	3	412	junction_1	275.287463390544	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGACAATTGTGCCTTCT	-15	True	NA	NA	False	AAGAAA	-20	NA	36331687	36312585	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36316071_36321299_36321358_36321992_36322031_36330252_36330493_36331446
H1_mix_00045571	chr19	-	968	7	FSM	ENSG00000232677.10	ENST00000691592.1	1103	7	119	16	12	-10	multi-exon	FALSE	canonical	3	81	junction_5	339.709025818011	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTGGGCTGGAATAGG	107	False	NA	-16	True	ATTAAA	-16	NA	36331622	36313076	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36313323_36315956_36316071_36321299_36321358_36321992_36322031_36322129_36322226_36330252_36330493_36331446
H1_mix_00045572	chr19	-	1003	6	FSM	ENSG00000232677.10	ENST00000449434.8	1019	6	0	16	0	-10	multi-exon	FALSE	canonical	3	299	junction_1	279.61187385374	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTGGGCTGGAATAGG	-24	True	NA	-16	True	ATTAAA	-16	NA	36331753	36313076	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36313323_36315956_36316071_36321299_36321358_36321992_36322031_36330252_36330493_36331446
H1_mix_00045573	chr19	-	3640	2	FSM	ENSG00000232677.10	ENST00000665982.1	1194	2	-2234	-212	-2234	0	multi-exon	FALSE	canonical	3	26	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACCTATCCGTTACCTCA	6679	False	NA	NA	False	TATAAA	-44	NA	36318751	36315004	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36316071_36316177
H1_mix_00045575	chr19	-	1358	7	FSM	ENSG00000232677.10	ENST00000412740.7	1358	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	372.803977386985	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACCTATCCGTTACCTCA	-5	True	NA	NA	False	TATAAA	-44	NA	36331734	36315004	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36315529_36315956_36316071_36321299_36321358_36321992_36322031_36322129_36322226_36330252_36330493_36331446
H1_mix_00045577	chr19	-	1574	6	FSM	ENSG00000232677.10	ENST00000659786.2	1571	6	0	-3	0	0	multi-exon	FALSE	canonical	3	81	junction_4	366.237955433349	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTTATTGACTCCCT	-5	True	NA	NA	False	GGGGCT	-5	NA	36331734	36315216	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36316071_36321299_36321358_36321992_36322031_36322129_36322226_36330252_36330493_36331446
H1_mix_00045579	chr19	-	1429	3	NIC	ENSG00000232677.10	novel	1397	3	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_1	531.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCGTTTTCTCTAACT	18	True	NA	-3	True	AATAAA	-23	NA	36331654	36324906	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_36325888_36330252_36330493_36331446
H1_mix_00045580	chr19	-	1397	3	FSM	ENSG00000232677.10	ENST00000651681.2	1397	3	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_1	412	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCGTTTTCTCTAACT	-16	True	NA	-3	True	AATAAA	-23	NA	36331745	36324906	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36325765_36330252_36330493_36331446
H1_mix_00045581	chr19	-	2548	4	FSM	ENSG00000232677.10	ENST00000658991.1	2540	4	0	-8	0	6	multi-exon	FALSE	canonical	3	18	junction_1	467.813590605869	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTCAAAGTGTGGCGT	-5	True	NA	-14	True	AATAAA	-12	NA	36331734	36324917	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36325765_36326052_36327226_36330252_36330493_36331446
H1_mix_00045582	chr19	-	2856	3	FSM	ENSG00000232677.10	ENST00000591372.3	2868	3	2	10	-1	6	multi-exon	FALSE	canonical	3	209	junction_1	441.5	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTCAAAGTGTGGCGT	-25	True	NA	-14	True	AATAAA	-12	NA	36331754	36324917	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36327226_36330252_36330493_36331446
H1_mix_00045583	chr19	-	2803	3	FSM	ENSG00000232677.10	ENST00000666458.1	2797	3	0	-6	0	6	multi-exon	FALSE	canonical	3	86	junction_1	503	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTCAAAGTGTGGCGT	-27	True	NA	-14	True	AATAAA	-12	NA	36331756	36324917	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36327171_36330252_36330493_36331446
H1_mix_00045585	chr19	-	7491	5	FSM	ENSG00000142065.14	ENST00000270001.12	7491	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	10.917302780449	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTATTTTTTAATTT	-5	True	NA	0	True	AATAAA	-20	NA	36379201	36334452	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36341591_36360434_36360534_36362111_36362239_36367883_36367972_36379162
H1_mix_00045586	chr19	-	2604	1	Genic_Genomic	ENSG00000181007.9	novel	NA	NA	NA	NA	10364	20	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTCGTCTTGACCCTT	NA	False	NA	12	True	AATAAA	-34	NA	36385703	36383099	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr19_-_36383100_36385700
H1_mix_00045588	chr19	-	5207	5	FSM	ENSG00000186017.16	ENST00000424129.7	5207	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	9.82344135219425	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGACTCATTTATTTTC	367	False	NA	0	True	AATAAA	-19	NA	36489506	36445118	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36450002_36472910_36473007_36473331_36473459_36476548_36476617_36489473
H1_mix_00045590	chr19	-	5286	3	FSM	ENSG00000254004.7	ENST00000523638.6	5285	3	0	-1	0	1	multi-exon	FALSE	canonical	3	330	junction_2	3	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCAGTTGTTTTTATTTC	-16	True	NA	0	True	AATAAA	-23	NA	36528271	36510685	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36515700_36525154_36525374_36528218
H1_mix_00045591	chr19	-	5125	2	NIC	ENSG00000254004.7	novel	5285	3	NA	NA	-58	1	combination_of_known_splicesites	FALSE	canonical	3	115	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCAGTTGTTTTTATTTC	350	False	NA	0	True	AATAAA	-23	NA	36528329	36510685	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_36515700_36528218
H1_mix_00045592	chr19	-	5052	5	FSM	ENSG00000186020.13	ENST00000591340.6	5144	5	0	92	0	-89	multi-exon	FALSE	canonical	3	23	junction_1	11.1439445440113	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAAGAGAGCCCTTACC	-14	True	NA	NA	False	NA	NA	NA	36573292	36543704	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36548323_36554669_36554797_36556103_36556198_36572332_36572393_36573139
H1_mix_00045594	chr19	-	3326	6	FSM	ENSG00000197808.13	ENST00000396893.6	3326	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	2.78567765543682	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGTCAAAACACAACCAATA	15	True	NA	NA	False	AAAAAG	-18	NA	36666819	36637191	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36640044_36643793_36643863_36656447_36656544_36658335_36658426_36664697_36664787_36666689
H1_mix_00045596	chr19	-	7717	5	FSM	ENSG00000267041.6	ENST00000591344.2	7712	5	0	-5	0	3	multi-exon	FALSE	canonical	3	4	junction_1	5.67340285895511	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTATTTCTTAATTTATA	-5	True	NA	-12	True	AATAAA	-26	NA	36772807	36743474	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36750805_36761642_36761739_36762304_36762432_36762594_36762676_36772724
H1_mix_00045598	chr19	-	3434	5	FSM	ENSG00000197863.9	ENST00000356725.9	3040	5	-302	-92	-302	92	multi-exon	FALSE	canonical	3	9	junction_4	8.25757228245687	334	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTTTTTAAAAGACATTCA	10	False	NA	NA	False	AGTAAA	-24	NA	36838689	36817335	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36820115_36823284_36823381_36823666_36823791_36825610_36825693_36838336
H1_mix_00045600	chr19	-	8335	5	FSM	ENSG00000196967.11	ENST00000292841.10	8572	5	0	237	0	-237	multi-exon	FALSE	canonical	3	9	junction_1	26.2047228567676	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCACCCCTGGGCTGATGT	4	True	NA	NA	False	TATAAA	-9	NA	37172695	37145776	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_37153607_37155864_37155958_37156228_37156356_37169838_37170055_37172626
H1_mix_00045601	chr19	-	599	3	FSM	ENSG00000196967.11	ENST00000588354.1	596	3	0	-3	0	3	multi-exon	FALSE	canonical	3	71	junction_2	3.5	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTTCTTTTTTTTTTTT	5	True	NA	NA	False	AATAAA	-20	NA	37172694	37165381	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_37165697_37169838_37170055_37172626
H1_mix_00045603	chr19	-	6209	5	FSM	ENSG00000245680.11	ENST00000532828.7	6197	5	0	-12	0	12	multi-exon	FALSE	canonical	3	4	junction_4	2.04633819296811	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTGTGAACATGACTG	-14	True	NA	3	True	AATAAA	-26	NA	37210536	37181566	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_37187245_37189660_37189754_37190023_37190151_37207039_37207255_37210440
H1_mix_00045604	chr19	-	2242	1	FSM	ENSG00000267605.8	ENST00000612804.1	2303	1	71	-10	71	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGGTGCCCCTTTAAA	NA	False	NA	NA	False	ATTAAA	-24	NA	37268177	37265935	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_37265900_37268200
H1_mix_00045606	chr19	-	4086	6	FSM	ENSG00000196437.12	ENST00000316950.11	4066	6	0	-20	0	18	multi-exon	FALSE	canonical	3	68	junction_5	5.84465567848098	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTGTCCAAATTAATTAT	-5	True	NA	2	True	AATAAA	-35	NA	37467444	37411136	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_37414420_37425867_37425964_37426251_37426379_37444906_37444965_37465312_37465474_37467083
H1_mix_00045608	chr19	-	2826	4	FSM	ENSG00000180479.14	ENST00000593133.5	2904	4	78	0	78	0	multi-exon	FALSE	canonical	3	6	junction_3	4.49691252107735	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGATATTTGTTGTTAAAA	470	False	NA	NA	False	ATTAAA	-26	NA	37594668	37564252	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_37566292_37583970_37584098_37586667_37586746_37594086
H1_mix_00045612	chr19	-	4299	5	NIC	ENSG00000198182.13	novel	4327	5	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_4	11.9687092035858	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATCATTACTTGTGTTA	14	True	NA	NA	False	AATAAA	-20	NA	37719736	37696370	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_37699896_37707913_37708010_37709695_37709823_37711609_37711693_37719268
H1_mix_00045613	chr19	-	2249	5	FSM	ENSG00000189144.15	ENST00000536220.7	2253	5	0	4	0	-4	multi-exon	FALSE	canonical	1	1	junction_1	2.12132034355964	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAGAAAAAAAAAAAAAAAA	7	True	NA	NA	False	NA	NA	NA	37779586	37738305	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_37740195_37770004_37770098_37771563_37771697_37773660_37773752_37779543
H1_mix_00045614	chr19	-	2274	12	FSM	ENSG00000011332.22	ENST00000614244.4	2356	12	86	-4	58	1	multi-exon	TRUE	canonical	3	15	junction_11	19.9192585078896	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCGTTCTCCCGTCTGG	5558	False	NA	-4	True	ATTAAA	-27	NA	38224164	38211004	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38212134_38212279_38212392_38213643_38213757_38216139_38216260_38216352_38216404_38217459_38217592_38217797_38217877_38218572_38218663_38218930_38219059_38222356_38222465_38222547_38222709_38224113
H1_mix_00045615	chr19	-	2332	12	FSM	ENSG00000011332.22	ENST00000686058.1	2341	12	9	0	9	0	multi-exon	FALSE	canonical	3	30	junction_2	15.0057840088083	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTATTAAACTGGGCCT	17	False	38229722	-42	True	NA	NA	NA	38229705	38211042	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38212134_38212279_38212392_38213643_38213757_38216139_38216260_38216352_38216404_38217459_38217592_38217797_38217877_38218572_38218663_38218930_38219059_38222356_38222465_38222547_38222709_38229558
H1_mix_00045618	chr19	-	1201	9	NNC	ENSG00000167645.17	novel	1181	8	NA	NA	0	483	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	435.091369714454	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTTAATCAGTGTGGGC	5972	False	NA	NA	False	NA	NA	NA	38315914	38303074	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_38303106_38305114_38305508_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315868
H1_mix_00045619	chr19	-	2769	8	FSM	ENSG00000167645.17	ENST00000339413.11	2769	8	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_7	362.878064638686	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGCTCACGCCTGTAAT	-3	True	NA	NA	False	AATAAA	-24	NA	38315947	38303557	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38305508_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315859
H1_mix_00045620	chr19	-	1181	8	FSM	ENSG00000167645.17	ENST00000592694.5	1181	8	0	0	0	0	multi-exon	FALSE	canonical	3	493	junction_7	252.349773455942	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTGGCCTCGCGCACG	5972	False	NA	-2	True	AATAAA	-27	NA	38315914	38305103	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38305508_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315868
H1_mix_00045621	chr19	-	1166	8	NIC	ENSG00000167645.17	novel	1257	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	144	junction_7	373.676603604819	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGACAGCCTCTCCTTGGC	11	True	NA	-12	True	AATAAA	-17	NA	38315763	38305113	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_38305508_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315722
H1_mix_00045622	chr19	-	1094	8	FSM	ENSG00000167645.17	ENST00000591755.5	1077	8	0	-17	0	17	multi-exon	FALSE	canonical	3	32	junction_1	449.630142790853	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACTCAGTTTCCCCTT	5966	False	NA	NA	False	AATAAA	-8	NA	38315920	38306679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38306991_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315868
H1_mix_00045623	chr19	-	3093	2	FSM	ENSG00000179168.15	ENST00000587676.1	520	2	292	-2865	202	49	multi-exon	FALSE	canonical	1	1	junction_1	0	4271	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGACTGATGGGTCCAG	242	False	NA	NA	False	NA	NA	NA	38387790	38384217	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38387281_38387760
H1_mix_00045626	chr19	-	1367	14	ISM	ENSG00000104814.13	ENST00000591921.1	1625	18	3877	-26	3877	0	3prime_fragment	FALSE	canonical	2	7	junction_13	43.8114572570035	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATCTCCCAATAAACATGA	9163	False	NA	-34	True	NA	NA	NA	38605757	38587673	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_38587818_38593281_38593338_38595484_38595556_38595639_38595730_38595938_38596002_38596311_38596487_38597033_38597138_38597325_38597385_38597485_38597595_38599924_38599986_38600076_38600154_38601440_38601526_38605408_38605492_38605567
H1_mix_00045628	chr19	-	896	5	FSM	ENSG00000182472.9	ENST00000597987.5	896	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	12.0830459735946	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGACGGCAGAGATATGT	9179	False	NA	-93	True	NA	NA	NA	38735405	38730273	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38730879_38730964_38731024_38731106_38731224_38733702_38733782_38735369
H1_mix_00045631	chr19	-	799	8	FSM	ENSG00000104823.9	ENST00000601778.5	799	8	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	578.423931816414	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGTGCACGCTCCGACC	8559	False	NA	NA	False	NA	NA	NA	38831761	38815856	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38816008_38816452_38816524_38817064_38817130_38817315_38817365_38817450_38817576_38831077_38831167_38831308_38831517_38831720
H1_mix_00045633	chr19	-	560	5	FSM	ENSG00000104823.9	ENST00000595470.1	560	5	0	0	0	0	multi-exon	FALSE	canonical	3	1708	junction_3	25.4165300542777	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTCGGGTGCTCCCCAGG	5	True	NA	NA	False	GGGGCT	-33	NA	38831789	38817295	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38817365_38817450_38817576_38831077_38831167_38831308_38831517_38831720
H1_mix_00045634	chr19	-	2142	13	FSM	ENSG00000104824.18	ENST00000221419.10	2142	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	404.498274615191	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGCTTTTCTCCCTCTC	-28	True	NA	0	True	AATAAA	-43	NA	38849986	38836369	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38836781_38837383_38837480_38837593_38837652_38838396_38838599_38838893_38839016_38840095_38840377_38840487_38840560_38843841_38843915_38844007_38844105_38845649_38845736_38845852_38846091_38847315_38847435_38849699
H1_mix_00045635	chr19	-	2078	13	NNC	ENSG00000104824.18	novel	2142	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	1239	junction_5	89.9771575950746	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGGGATTCCAGGATG	18	True	NA	-18	True	AATAAA	-25	NA	38849940	38836387	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_38836781_38837383_38837480_38837593_38837652_38838396_38838599_38838893_38839016_38840095_38840377_38840487_38840560_38843841_38843915_38844007_38844103_38845647_38845736_38845852_38846091_38847315_38847435_38849699
H1_mix_00045636	chr19	-	3097	6	FSM	ENSG00000104824.18	ENST00000597731.1	3094	6	0	-3	0	0	multi-exon	FALSE	canonical	3	1239	junction_5	113.680957068455	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCACTTGCTGGGATTC	10014	False	NA	-25	True	AATAAA	-18	NA	38842328	38836394	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38836781_38837383_38837480_38837593_38837652_38838396_38838599_38838893_38839016_38840095
H1_mix_00045639	chr19	-	1818	3	FSM	ENSG00000187994.14	ENST00000593424.5	1810	3	0	-8	0	4	multi-exon	FALSE	canonical	3	38	junction_1	1	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTTTGTGTGTGTGTAT	16	True	NA	1	True	ATTAAA	-26	NA	38870043	38867825	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38869411_38869572_38869705_38869942
H1_mix_00045640	chr19	-	1738	4	ISM	ENSG00000187994.14	ENST00000598904.5	1846	11	6738	-1156	0	4	3prime_fragment	FALSE	canonical	3	25	junction_1	6.64997911442	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTTTGTGTGTGTGTAT	16	True	NA	1	True	ATTAAA	-26	NA	38870043	38867825	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_38869167_38869246_38869411_38869572_38869705_38869942
H1_mix_00045641	chr19	-	1866	16	FSM	ENSG00000068903.21	ENST00000249396.12	1862	16	0	-4	0	-1	multi-exon	FALSE	canonical	3	12	junction_14	20.862938964159	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGGCCTCCTGTTTCTTT	0	True	NA	0	True	ATTAAA	-23	NA	38899618	38878555	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38879311_38879433_38879501_38879631_38879703_38880684_38880737_38880820_38880898_38881099_38881156_38881431_38881492_38883626_38883757_38889086_38889156_38889688_38889746_38889854_38889962_38890102_38890145_38893413_38893528_38893818_38893868_38898378_38898426_38899505
H1_mix_00045644	chr19	-	1936	16	FSM	ENSG00000104835.15	ENST00000221431.11	1924	16	0	-12	0	12	multi-exon	TRUE	canonical	0	0	junction_5	85.4476837993088	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTGAACAAGGGAGATGC	-10	True	NA	8	True	AATAAA	-26	NA	38930763	38915253	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38915750_38915840_38915907_38916036_38916130_38916220_38916315_38917723_38917834_38917920_38918009_38918093_38918140_38918421_38918531_38918765_38918814_38919761_38919868_38920085_38920150_38921391_38921447_38921526_38921668_38922237_38922268_38926204_38926301_38930469
H1_mix_00045646	chr19	-	1022	3	FSM	ENSG00000104835.15	ENST00000598598.5	1022	3	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_1	9	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGGAGATCCGGAAGGAGC	-10	True	NA	NA	False	NA	NA	NA	38930763	38921635	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38922268_38926204_38926301_38930469
H1_mix_00045647	chr19	-	2622	1	FSM	ENSG00000269486.2	ENST00000599320.2	3336	1	724	-10	724	10	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGCTCTGAAGGCTGTG	NA	False	NA	NA	False	AATAAA	-27	NA	38937908	38935286	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38935300_38937900
H1_mix_00045648	chr19	-	2220	6	FSM	ENSG00000269190.6	ENST00000292852.9	2218	6	0	-2	0	2	multi-exon	TRUE	canonical	3	91	junction_2	9.21737489744233	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGTATGTGTCTTTA	-23	True	NA	0	True	NA	NA	NA	38975742	38941398	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38942752_38944968_38945105_38946471_38946568_38948566_38948679_38949970_38950337_38975585
H1_mix_00045651	chr19	-	2318	6	FSM	ENSG00000161243.9	ENST00000292853.9	2315	6	0	-3	0	3	multi-exon	TRUE	canonical	3	48	junction_5	21.442014830701	564	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAGATCTTTTTAATAGA	-6	True	NA	0	True	AATAAA	-22	NA	39032549	39024017	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_39025555_39026869_39027006_39031028_39031125_39031208_39031321_39031863_39032254_39032502
H1_mix_00045653	chr19	-	2200	14	FSM	ENSG00000006712.15	ENST00000221265.8	2200	14	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_7	12.8099443619484	214	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCTTCTCCAACAGCGA	-25	True	NA	NA	False	ATTAAA	-20	NA	39391106	39385628	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_39386404_39386481_39386573_39386693_39386800_39388338_39388468_39388559_39388677_39388761_39388866_39388946_39389016_39389092_39389199_39389281_39389384_39389479_39389547_39389639_39389762_39390068_39390162_39390259_39390290_39390817
H1_mix_00045654	chr19	-	395	4	NNC	ENSG00000105193.9	novel	631	5	NA	NA	0	40064	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	3181.74365194097	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAGAAAAGGA	2183	False	NA	NA	False	AAAAAG	-9	NA	39433761	39393072	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_39393114_39433209_39433419_39433521_39433570_39433664
H1_mix_00045655	chr19	-	632	5	FSM	ENSG00000105193.9	ENST00000251453.8	631	5	0	-1	0	1	multi-exon	FALSE	canonical	3	6641	junction_1	122.418340129247	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTCTGGATTTTGACCC	-5	True	NA	-25	True	AGTAAA	-16	NA	39435949	39433135	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_39433419_39433521_39433570_39433664_39433762_39435606_39435709_39435847
H1_mix_00045656	chr19	-	643	4	FSM	ENSG00000105193.9	ENST00000339471.8	643	4	0	0	0	0	multi-exon	FALSE	canonical	3	6641	junction_1	140.330562126241	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTGGCCTTATGTGT	8	True	NA	-23	True	AATAAA	-32	NA	39435936	39433206	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_39433419_39433521_39433762_39435606_39435709_39435847
H1_mix_00045657	chr19	-	492	5	FSM	ENSG00000105193.9	ENST00000601655.5	492	5	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_3	2774.82026444957	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCAAGAACTGTGTGTGG	3	True	NA	-33	True	AATAAA	-22	NA	39435941	39433216	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_39433419_39433521_39433570_39433664_39433762_39435657_39435709_39435847
H1_mix_00045658	chr19	-	2395	4	FSM	ENSG00000105193.9	ENST00000601390.1	2389	4	0	-6	0	0	multi-exon	FALSE	canonical	3	6641	junction_1	95.374117150421	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCAAGAACTGTGTGTGG	-4	True	NA	-33	True	AATAAA	-22	NA	39435948	39433216	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_39433419_39433521_39433570_39433664_39435709_39435847
H1_mix_00045660	chr19	-	414	4	FSM	ENSG00000105193.9	ENST00000599705.1	407	4	0	-7	0	0	multi-exon	FALSE	canonical	3	4	junction_1	3259.96526907198	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTTGTATAATAAACAGTT	9782	False	NA	-69	True	NA	NA	NA	39435705	39433252	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_39433419_39433517_39433570_39433664_39433762_39435606
H1_mix_00045662	chr19	-	1564	1	FSM	ENSG00000176396.11	ENST00000390658.4	1455	1	0	-109	0	109	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTACTTGTTTTATTT	-5	True	NA	NA	False	TATAAA	-3	NA	39540161	39538597	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_39538600_39540200
H1_mix_00045663	chr19	-	689	4	FSM	ENSG00000105205.7	ENST00000221804.5	631	4	-58	0	-58	0	multi-exon	FALSE	canonical	3	11	junction_2	3.29983164553722	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAATTTGGTTCTTGCTTT	NA	False	NA	-3	True	ATTAAA	-17	NA	39738087	39731254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_39731506_39734282_39734494_39734996_39735074_39737937
H1_mix_00045664	chr19	-	1158	10	NNC	ENSG00000105202.9	novel	1125	9	NA	NA	0	67542	intron_retention	TRUE	non_canonical	0	0	junction_1	819.459773867915	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGCTGATGCATCCTCTCC	-19	True	NA	NA	False	NA	NA	NA	39846379	39766915	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_39766949_39834457_39834563_39834667_39834814_39836555_39836669_39837710_39837844_39839034_39839206_39840232_39840328_39840413_39840516_39840616_39840788_39846290
H1_mix_00045665	chr19	-	2723	11	FSM	ENSG00000105204.14	ENST00000593685.5	2724	11	0	1	0	-1	multi-exon	FALSE	canonical	3	19	junction_10	32.4759911319116	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTGCCTGAGCGTTTGC	1	True	NA	-5	True	AGTAAA	-13	NA	39833634	39825350	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_39826087_39826179_39826287_39826671_39826988_39827284_39827426_39827509_39827657_39828296_39828584_39829879_39830028_39830374_39830564_39830663_39830784_39831804_39831969_39833266
H1_mix_00045667	chr19	-	2435	12	FSM	ENSG00000105204.14	ENST00000348817.7	2448	12	20	-7	-19	4	multi-exon	FALSE	canonical	3	11	junction_3	33.1343371371854	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGAGCGTTTGCAGGGC	6565	False	NA	0	True	AGTAAA	-18	NA	39834181	39825345	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_39826087_39826179_39826287_39826671_39826868_39826951_39826988_39827284_39827426_39827509_39827657_39828296_39828584_39829879_39830028_39830374_39830564_39830663_39830784_39831804_39831969_39834022
H1_mix_00045669	chr19	-	896	6	FSM	ENSG00000105202.9	ENST00000595545.5	896	6	0	0	0	0	multi-exon	FALSE	canonical	3	2519	junction_5	79.5401785263272	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATGTCTGCTGCTCATT	5919	False	NA	-7	True	ATTAAA	-14	NA	39840441	39834457	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_39834814_39836555_39836669_39837710_39837844_39839034_39839206_39840232_39840328_39840413
H1_mix_00045670	chr19	-	1125	9	FSM	ENSG00000105202.9	ENST00000221801.8	1125	9	0	0	0	0	multi-exon	FALSE	canonical	3	1948	junction_7	265.37049572249	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATGTCTGCTGCTCATT	-19	True	NA	-7	True	ATTAAA	-14	NA	39846379	39834457	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_39834563_39834667_39834814_39836555_39836669_39837710_39837844_39839034_39839206_39840232_39840328_39840413_39840516_39840616_39840788_39846290
H1_mix_00045671	chr19	-	1400	5	FSM	ENSG00000105202.9	ENST00000599159.1	1400	5	0	0	0	0	multi-exon	FALSE	canonical	3	1948	junction_3	247.024796326199	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTTTAATCAGGCAAGTTA	-16	True	NA	NA	False	NA	NA	NA	39846376	39838259	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_39839206_39840232_39840328_39840413_39840516_39840616_39840788_39846290
H1_mix_00045673	chr19	-	442	1	FSM	ENSG00000187534.6	ENST00000596581.1	442	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATACAGGCCCTGGACC	9696	False	NA	NA	False	NA	NA	NA	39943680	39943238	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_39943200_39943700
H1_mix_00045675	chr19	-	7500	6	FSM	ENSG00000197782.15	ENST00000450241.6	7500	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	27.1587923148287	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCCTCAGATATTCTTT	12	True	NA	-3	True	AATAAA	-16	NA	40090888	40069151	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40076210_40081818_40081915_40083110_40083238_40084744_40084799_40090165_40090236_40090793
H1_mix_00045676	chr19	-	3600	6	FSM	ENSG00000197782.15	ENST00000455521.5	3600	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	29.4305963242337	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCATTTTCAGATTTCTT	-4	True	NA	NA	False	NA	NA	NA	40090938	40072992	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40076210_40081818_40081918_40083110_40083238_40084744_40084799_40090165_40090236_40090905
H1_mix_00045680	chr19	-	541	6	NIC	ENSG00000197782.15	novel	7500	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_5	31.3776990870905	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGCATTGAGGCCTTT	12	True	NA	-7	True	AGTAAA	-36	NA	40090888	40076113	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_40076210_40081818_40081918_40083110_40083238_40084744_40084799_40090165_40090236_40090793
H1_mix_00045681	chr19	-	583	6	NNC	ENSG00000197782.15	novel	7500	6	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_5	31.2563593529381	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTGGCATTGAGGCCTT	12	True	NA	-8	True	AGTAAA	-35	NA	40090888	40076114	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_40076210_40081818_40081915_40083110_40083238_40084744_40084799_40090165_40090236_40090747
H1_mix_00045683	chr19	-	1149	6	FSM	ENSG00000105219.10	ENST00000599263.6	1145	6	0	-4	0	4	multi-exon	FALSE	canonical	1	2	junction_3	1.62480768092719	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCCCTCATTGGTCGA	7119	False	NA	3	True	AATAAA	-24	NA	40226697	40222203	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40222473_40223151_40223304_40223387_40223547_40224487_40224644_40224721_40224812_40226374
H1_mix_00045684	chr19	-	5250	14	FSM	ENSG00000105221.18	ENST00000392038.7	5250	14	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_13	15.4862030597271	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGCTGGTGCTTTTGTTT	-12	True	NA	-5	True	AATAAA	-18	NA	40285345	40230316	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40233952_40235044_40235148_40235262_40235351_40235889_40236105_40236256_40236386_40237968_40238092_40238904_40238974_40240044_40240111_40241937_40242070_40242533_40242688_40255157_40255270_40256925_40257055_40265221_40265352_40285180
H1_mix_00045685	chr19	-	4515	14	NNC	ENSG00000105221.18	novel	5250	14	NA	NA	0	-633	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_11	30.3901650238612	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGTTCGAGACCAGCCTG	-12	True	NA	NA	False	NA	NA	NA	40285345	40230950	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_40233952_40235044_40235148_40235262_40235351_40235889_40236105_40236256_40236386_40237968_40238092_40238904_40238974_40240044_40240111_40241937_40242070_40242533_40242688_40255157_40255270_40257026_40257055_40265221_40265352_40285180
H1_mix_00045687	chr19	-	8533	9	FSM	ENSG00000160392.14	ENST00000683109.1	3611	9	-23	-4899	-23	4899	multi-exon	FALSE	canonical	3	73	junction_8	14.7938965455353	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAATGTGTCTCTTCTCCT	2	True	NA	-2	True	CATAAA	-23	NA	40348420	40314636	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40322377_40324005_40324077_40326333_40326487_40328412_40328551_40333850_40333930_40336109_40336225_40336319_40336408_40341838_40341891_40348323
H1_mix_00045690	chr19	-	4871	7	FSM	ENSG00000105227.16	ENST00000324001.8	4867	7	0	-4	0	2	multi-exon	FALSE	canonical	3	8	junction_2	12.8290035986172	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTTGTCTCCTCTGTGT	1	True	NA	-3	True	AATAAA	-19	NA	40413378	40393763	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40397971_40398619_40398817_40403705_40403863_40407905_40408032_40408157_40408257_40408339_40408384_40413337
H1_mix_00045691	chr19	-	738	5	NIC	ENSG00000105227.16	novel	475	3	NA	NA	0	8	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	7.39932429347437	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGACCCTGT	8477	False	NA	NA	False	AATAAA	-16	NA	40413364	40407277	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_40407720_40407905_40408032_40408157_40408257_40408339_40408384_40413337
H1_mix_00045694	chr19	-	1780	2	FSM	ENSG00000167565.13	ENST00000322354.4	1364	2	-416	0	-416	0	multi-exon	FALSE	canonical	3	258	junction_1	0	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGTTGTCTAATGTTTCT	NA	False	NA	-1	True	AATAAA	-17	NA	40444751	40440843	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40442087_40444214
H1_mix_00045695	chr19	-	799	5	FSM	ENSG00000090013.11	ENST00000263368.9	799	5	0	0	0	0	multi-exon	FALSE	canonical	1	133	junction_4	154.516180382509	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCCTCTGTCTGAGTA	1	True	NA	16	True	NA	NA	NA	40465745	40447767	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40448047_40451363_40451493_40458154_40458245_40458380_40458546_40465609
H1_mix_00045696	chr19	-	653	4	FSM	ENSG00000090013.11	ENST00000595483.5	649	4	0	-4	0	4	multi-exon	FALSE	canonical	1	1	junction_1	207.012613679027	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGACTCTTCCTCTCT	1	True	NA	-1	True	AATAAA	-40	NA	40465745	40447784	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40448047_40458154_40458245_40458380_40458546_40465609
H1_mix_00045697	chr19	-	3525	10	NIC	ENSG00000105245.9	novel	3561	10	NA	NA	1	-32	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	24.0898523792555	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAATTTTGTTTCGTTAT	-4	True	NA	-34	True	AATATA	-6	NA	40690650	40665936	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_40668139_40669897_40670021_40673343_40673647_40677231_40677422_40680916_40681058_40682727_40682803_40682893_40682969_40684416_40684557_40686910_40686996_40690459
H1_mix_00045698	chr19	-	3598	10	FSM	ENSG00000105245.9	ENST00000252891.8	3561	10	-37	0	-37	0	multi-exon	FALSE	canonical	3	69	junction_3	13.5710294195456	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTGGTTGATTTTGTGC	NA	False	NA	-2	True	TATAAA	-27	NA	40690688	40665904	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40668139_40669897_40670021_40673343_40673650_40677231_40677422_40680916_40681058_40682727_40682803_40682893_40682969_40684416_40684557_40686910_40686996_40690459
H1_mix_00045699	chr19	-	2080	1	FSM	ENSG00000105245.9	ENST00000598759.1	2062	1	0	-18	0	18	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAAGCGTAGTGGTGGC	4497	False	NA	NA	False	NA	NA	NA	40686149	40684069	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40684100_40686100
H1_mix_00045701	chr19	-	2257	14	FSM	ENSG00000123815.13	ENST00000678467.1	2273	14	0	16	0	0	multi-exon	FALSE	canonical	3	182	junction_9	17.6956518578592	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGCTCTTTTCTCTGCG	2137	False	NA	-5	True	AATAAA	-17	NA	40714749	40691529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530
H1_mix_00045703	chr19	-	2495	14	FSM	ENSG00000123815.13	ENST00000678961.1	2511	14	0	16	0	0	multi-exon	FALSE	canonical	0	0	junction_6	76.787958252218	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGCTCTTTTCTCTGCG	-5	True	NA	-5	True	AATAAA	-17	NA	40715093	40691529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703368_40703623_40703714_40703856_40705095_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40715056
H1_mix_00045704	chr19	-	2206	15	FSM	ENSG00000123815.13	ENST00000601967.6	2201	15	-21	16	-8	0	multi-exon	FALSE	canonical	3	18	junction_14	53.6931949475301	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGCTCTTTTCTCTGCG	-31	True	NA	-5	True	AATAAA	-17	NA	40715119	40691529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40715056
H1_mix_00045706	chr19	-	2499	14	FSM	ENSG00000123815.13	ENST00000678433.1	2512	14	0	13	0	3	multi-exon	FALSE	canonical	2	8	junction_5	68.3558388878315	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCTTTTCTCTGCGCTA	86	False	NA	-2	True	AATAAA	-20	NA	40716800	40691526	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700448_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40716586
H1_mix_00045707	chr19	-	2585	14	FSM	ENSG00000123815.13	ENST00000677399.1	2598	14	0	13	0	3	multi-exon	FALSE	canonical	3	67	junction_13	42.9916738877267	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCTTTTCTCTGCGCTA	4	True	NA	-2	True	AATAAA	-20	NA	40716882	40691526	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40716586
H1_mix_00045708	chr19	-	2284	16	FSM	ENSG00000123815.13	ENST00000677018.1	2297	16	0	13	0	3	multi-exon	FALSE	canonical	3	34	junction_15	58.8304531872926	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCTTTTCTCTGCGCTA	4	True	NA	-2	True	AATAAA	-20	NA	40716882	40691526	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40716586_40716704_40716861
H1_mix_00045709	chr19	-	2446	15	FSM	ENSG00000123815.13	ENST00000324464.8	2443	15	0	-3	0	3	multi-exon	FALSE	canonical	3	67	junction_14	41.9190789936214	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCTTTTCTCTGCGCTA	0	True	NA	-2	True	AATAAA	-20	NA	40716886	40691526	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40716586
H1_mix_00045710	chr19	-	2181	15	FSM	ENSG00000123815.13	ENST00000594720.6	2194	15	0	13	0	3	multi-exon	FALSE	canonical	3	43	junction_14	47.631932780522	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCTTTTCTCTGCGCTA	-10	True	NA	-2	True	AATAAA	-20	NA	40716896	40691526	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40716861
H1_mix_00045711	chr19	-	2561	16	NNC	ENSG00000123815.13	novel	2443	15	NA	NA	105	0	intron_retention	FALSE	canonical	1	2	junction_15	64.8535444075513	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGCTCTTTTCTCTGCG	NA	False	NA	-5	True	AATAAA	-17	NA	40718102	40691529	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40716586_40716980_40718077
H1_mix_00045714	chr19	-	2589	7	NIC	ENSG00000188493.15	novel	1792	9	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_6	22.4845626053867	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATGTTCTGTTTATTG	32	True	NA	-4	True	AATAAA	-19	NA	40750436	40740855	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_40742771_40743904_40743976_40744066_40744197_40744558_40744684_40745129_40745199_40749480_40749608_40750284
H1_mix_00045715	chr19	-	3309	6	FSM	ENSG00000188493.15	ENST00000378313.7	3302	6	0	-7	0	2	multi-exon	FALSE	canonical	3	82	junction_2	15.1340675299141	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGTTCTGTTTATTGGG	-9	True	NA	-2	True	AATAAA	-21	NA	40750477	40740853	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40742771_40743904_40743976_40744066_40744197_40744558_40744684_40745129_40745199_40749480
H1_mix_00045716	chr19	-	2523	6	FSM	ENSG00000188493.15	ENST00000470681.5	2521	6	0	-2	0	2	multi-exon	FALSE	canonical	3	55	junction_5	25.4605577315188	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGTTCTGTTTATTGGG	-24	True	NA	-2	True	AATAAA	-21	NA	40750492	40740853	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40742771_40743904_40743982_40744558_40744684_40745129_40745199_40749480_40749608_40750284
H1_mix_00045719	chr19	-	535	3	FSM	ENSG00000237118.3	ENST00000641827.1	1004	3	233	236	233	71	multi-exon	TRUE	canonical	0	0	junction_2	1.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCCACGGTCTGCCTCC	551	False	NA	NA	False	NA	NA	NA	40826238	40818649	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40818900_40825119_40825262_40826095
H1_mix_00045721	chr19	-	1003	4	FSM	ENSG00000123810.9	ENST00000243578.8	1007	4	0	4	0	-4	multi-exon	FALSE	canonical	3	28	junction_3	5.09901951359278	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGTCTGCCTCCTGACC	-10	True	NA	-5	True	AGTAAA	-16	NA	41364149	41354420	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_41355014_41357896_41358023_41363431_41363524_41363957
H1_mix_00045722	chr19	-	421	3	FSM	ENSG00000123810.9	ENST00000601597.1	421	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	10.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCAGAGCCTGTTTCTT	9	True	NA	0	True	AATAAA	-16	NA	41364092	41361009	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_41361204_41363431_41363524_41363957
H1_mix_00045724	chr19	-	1853	2	FSM	ENSG00000177191.3	ENST00000691102.1	1543	2	-310	0	-126	0	multi-exon	FALSE	canonical	3	14	junction_1	0	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGGGGTTGTTTTTGCA	8794	False	NA	-1	True	AAAACA	-18	NA	41427684	41425358	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_41426811_41427283
H1_mix_00045728	chr19	-	1622	5	FSM	ENSG00000105341.19	ENST00000592922.6	1622	5	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_3	81.3664550045042	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTCCCTGTTCAAGTT	NA	False	NA	-22	True	NA	NA	NA	41439936	41431338	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_41432409_41433271_41433435_41433536_41433674_41438217_41438415_41439881
H1_mix_00045732	chr19	-	661	5	FSM	ENSG00000105404.11	ENST00000600292.5	653	5	0	-8	0	8	multi-exon	FALSE	canonical	3	111	junction_1	642.117347141471	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTTCTGTGGGTCTCTA	9624	False	NA	-8	True	AATAAA	-36	NA	41959266	41956672	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_41956891_41957017_41957120_41958285_41958384_41958735_41958949_41959236
H1_mix_00045733	chr19	-	636	4	FSM	ENSG00000105404.11	ENST00000601891.5	628	4	0	-8	0	8	multi-exon	FALSE	canonical	3	26	junction_1	774.081103990761	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTTCTGTGGGTCTCTA	29	True	NA	-8	True	AATAAA	-36	NA	41959299	41956672	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_41956935_41958285_41958384_41958735_41958949_41959236
H1_mix_00045734	chr19	-	760	5	FSM	ENSG00000105404.11	ENST00000222008.11	750	5	0	-10	0	8	multi-exon	FALSE	canonical	3	1357	junction_2	153.451946875887	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTTCTGTGGGTCTCTA	7	True	NA	-8	True	AATAAA	-36	NA	41959321	41956672	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_41956935_41957017_41957120_41958285_41958384_41958735_41958949_41959236
H1_mix_00045735	chr19	-	729	2	FSM	ENSG00000105404.11	ENST00000595226.1	725	2	0	-4	0	-2	multi-exon	FALSE	canonical	3	1374	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAATATTCCCCCAGCATC	9826	False	NA	-23	True	AATAAA	-21	NA	41957499	41956687	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_41956935_41957017
H1_mix_00045736	chr19	-	3867	22	FSM	ENSG00000105409.19	ENST00000441343.5	3818	22	-49	0	7	0	multi-exon	FALSE	canonical	3	108	junction_14	18.4852702284684	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTGTGTGTGTTGTGCCT	NA	False	NA	-1	True	AATATA	-18	NA	41994263	41966581	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_41967341_41967661_41967764_41968784_41968916_41969434_41969581_41970184_41970309_41970387_41970543_41975628_41975798_41976415_41976567_41977935_41978073_41978150_41978327_41978605_41978799_41981501_41981637_41981721_41981832_41981907_41982107_41984917_41985187_41985305_41985424_41985863_41985999_41986115_41986230_41987935_41988140_41988317_41988378_41988475_41988563_41994070
H1_mix_00045737	chr19	-	3551	23	FSM	ENSG00000105409.19	ENST00000648268.1	3551	23	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_15	18.6722492635993	2650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTGTGTGTGTTGTGCCT	-3	True	NA	-1	True	AATATA	-18	NA	41994230	41966581	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_41966966_41967248_41967341_41967661_41967764_41968784_41968916_41969434_41969581_41970184_41970309_41970387_41970543_41975628_41975798_41976415_41976567_41977935_41978073_41978150_41978327_41978605_41978799_41981501_41981637_41981721_41981832_41981907_41982107_41984917_41985187_41985305_41985424_41985863_41985999_41986115_41986230_41987935_41988140_41988317_41988378_41988475_41988563_41994070
H1_mix_00045738	chr19	-	3630	23	FSM	ENSG00000105409.19	ENST00000545399.6	3628	23	0	-2	0	0	multi-exon	FALSE	canonical	2	5	junction_22	34.0120299573281	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTGTGTGTGTTGTGCCT	NA	False	NA	-1	True	AATATA	-18	NA	41994270	41966581	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_41966966_41967248_41967341_41967661_41967764_41968784_41968916_41969434_41969581_41970184_41970309_41970387_41970543_41975628_41975798_41976415_41976567_41977935_41978073_41978150_41978327_41978605_41978799_41981501_41981637_41981721_41981832_41981907_41982107_41984917_41985187_41985305_41985424_41985863_41985999_41986115_41986230_41987935_41988140_41988317_41988378_41988475_41988602_41994070
H1_mix_00045740	chr19	-	4390	19	NIC	ENSG00000105737.10	novel	4506	20	NA	NA	12	7	combination_of_known_splicesites	FALSE	canonical	3	9	junction_7	12.6710518724988	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCGTCTCTCATTTCCTGG	5	True	NA	2	True	AATAAA	-29	NA	42070194	41998313	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_41999300_42003331_42003454_42003554_42003684_42005722_42005949_42006644_42006811_42021300_42021475_42021946_42022057_42042551_42042756_42053601_42053710_42053824_42053930_42054319_42054473_42056661_42056824_42056924_42056979_42059348_42059528_42062487_42062654_42062757_42062856_42065222_42065388_42065691_42065821_42069240
H1_mix_00045741	chr19	-	3308	20	FSM	ENSG00000105737.10	ENST00000593562.6	4506	20	708	490	708	429	multi-exon	FALSE	canonical	3	35	junction_1	8.10594665607514	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAGCAGTCTCCGCTCC	6402	False	NA	NA	False	GGGGCT	-44	NA	42069498	41998813	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_41999300_42003331_42003454_42003554_42003684_42005722_42005949_42006644_42006811_42021300_42021475_42021946_42022057_42022240_42022355_42042551_42042756_42053601_42053710_42053824_42053930_42054319_42054473_42056661_42056824_42056924_42056979_42059348_42059528_42062487_42062654_42062757_42062856_42065222_42065388_42065691_42065821_42069240
H1_mix_00045744	chr19	-	1905	5	FSM	ENSG00000160570.14	ENST00000596251.6	1905	5	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_4	71.5209759441242	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCCTCTCTAGGACTCTT	22	True	NA	-14	True	ATTAAA	-28	NA	42217677	42198597	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_42199830_42209699_42209841_42215132_42215253_42216679_42217046_42217631
H1_mix_00045745	chr19	-	1604	4	FSM	ENSG00000160570.14	ENST00000593804.5	1586	4	0	-18	0	0	multi-exon	FALSE	canonical	3	115	junction_3	76.2291865946954	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCCTCTCTAGGACTCTT	2413	False	NA	-14	True	ATTAAA	-28	NA	42217742	42198597	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_42199830_42209699_42209841_42215132_42215253_42217631
H1_mix_00045747	chr19	-	2193	11	FSM	ENSG00000105723.13	ENST00000222330.8	2193	11	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_10	25.8835855321476	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTTTCTGTCCGGCTGC	1	True	NA	-5	True	AATAAA	-16	NA	42242602	42230189	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_42230868_42232056_42232150_42232495_42232683_42233109_42233206_42233285_42233384_42234352_42234460_42234547_42234679_42236605_42236717_42236857_42236942_42239954_42240143_42242182
H1_mix_00045749	chr19	-	761	3	FSM	ENSG00000105723.13	ENST00000493059.1	761	3	0	0	0	0	multi-exon	FALSE	canonical	3	434	junction_2	20.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGGCCCCCTCCCCTCC	9766	False	NA	NA	False	NA	NA	NA	42232837	42230541	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_42230868_42232056_42232150_42232495
H1_mix_00045750	chr19	-	2681	4	FSM	ENSG00000105722.10	ENST00000222329.9	2672	4	0	-9	0	9	multi-exon	FALSE	canonical	3	93	junction_3	12.0830459735946	214	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGTCCTAGGTGCTCGGT	-2	True	NA	-17	True	AATAAA	-26	NA	42255128	42247559	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_42249739_42249826_42249943_42250330_42250566_42254977
H1_mix_00045751	chr19	-	1151	5	FSM	ENSG00000079462.8	ENST00000594989.5	649	5	-499	-3	-14	0	multi-exon	FALSE	canonical	3	65	junction_1	395.598913041985	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTCCTGCTTTATGG	-5	True	NA	-22	True	ATTAAA	-17	NA	42302791	42297032	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_42297366_42300041_42300093_42300170_42300288_42301949_42302040_42302231
H1_mix_00045752	chr19	-	1113	6	FSM	ENSG00000079462.8	ENST00000538771.5	1098	6	0	-15	0	15	multi-exon	FALSE	canonical	3	391	junction_5	230.58967886703	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTCGAACCTGTCTGGG	9	True	NA	-7	True	ATTAAA	-32	NA	42302777	42297017	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_42297366_42299969_42300093_42300170_42300288_42301949_42302040_42302231_42302326_42302436
H1_mix_00045753	chr19	-	1071	5	FSM	ENSG00000079462.8	ENST00000262890.8	1054	5	0	-17	0	15	multi-exon	FALSE	canonical	3	918	junction_1	34.6292867382509	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTCGAACCTGTCTGGG	-15	True	NA	-7	True	ATTAAA	-32	NA	42302624	42297017	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_42297366_42299969_42300093_42300170_42300288_42301949_42302040_42302231
H1_mix_00045754	chr19	-	582	6	FSM	ENSG00000079462.8	ENST00000595530.5	582	6	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_5	351.865883540874	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCCTCGGGCCCACTTCC	16	True	NA	NA	False	NA	NA	NA	42302770	42297279	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_42297366_42299969_42300093_42300170_42300288_42301949_42302040_42302231_42302326_42302698
H1_mix_00045756	chr19	-	362	2	ISM	ENSG00000105427.10	ENST00000222032.10	533	4	2815	5	2786	-5	3prime_fragment	FALSE	canonical	3	245	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAACTCCGCCTACATCCA	-5	True	NA	-15	True	AATAAA	-10	NA	42387482	42387023	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_42387243_42387339
H1_mix_00045758	chr19	-	692	1	FSM	ENSG00000269374.1	ENST00000600255.1	639	1	-6	-47	-6	47	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATCATAGGAAAACATTAAA	NA	False	NA	NA	False	TATAAA	-44	NA	42485720	42485028	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_42485000_42485700
H1_mix_00045760	chr19	-	688	2	FSM	ENSG00000231412.3	ENST00000595748.2	721	2	31	2	31	-2	multi-exon	TRUE	canonical	3	32	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTGTTTGGTGGTCTCT	-3	True	NA	NA	False	AATAAA	-20	NA	43331513	43328990	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_43329509_43331343
H1_mix_00045762	chr19	-	1297	2	ISM	ENSG00000124466.9	ENST00000594326.1	574	3	609	-1021	609	7	3prime_fragment	FALSE	canonical	3	37	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCACTTCCACCTTGTT	1	True	NA	0	True	AATAAA	-30	NA	43463354	43460779	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_43461848_43463125
H1_mix_00045763	chr19	-	410	3	FSM	ENSG00000124466.9	ENST00000594326.1	574	3	164	0	164	0	multi-exon	FALSE	canonical	3	13	junction_2	12	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCACTCGGGATGGAGT	6523	False	NA	NA	False	GGGGCT	-15	NA	43463799	43461800	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_43461848_43463125_43463288_43463598
H1_mix_00045767	chr19	-	719	6	FSM	ENSG00000105755.8	ENST00000594342.5	702	6	-17	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	47.2922826685285	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAATGACACTGCACCTCT	20	False	NA	-76	True	NA	NA	NA	43527222	43506791	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_43506903_43507943_43508061_43508774_43508865_43511436_43511567_43526514_43526660_43527096
H1_mix_00045769	chr19	-	2052	17	FSM	ENSG00000073050.12	ENST00000262887.10	2052	17	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_7	20.4110111214511	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAGAGTCTCCCAAAACT	-1	True	NA	-21	True	AATAAA	-17	NA	43575527	43543310	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_43543506_43543611_43543688_43544143_43544235_43545817_43545958_43546051_43546107_43546594_43546728_43546883_43546978_43551570_43551688_43552016_43552276_43552796_43552909_43552981_43553092_43553400_43553513_43553608_43553684_43554645_43554805_43560909_43561021_43574909_43575003_43575407
H1_mix_00045770	chr19	-	1994	16	FSM	ENSG00000073050.12	ENST00000543982.5	1994	16	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_15	57.0943079474653	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCAAGAGTCTCCCAAAAC	-37	True	NA	-22	True	AATAAA	-16	NA	43575563	43543311	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_43543506_43543611_43543688_43544143_43544235_43545817_43545958_43546051_43546107_43546594_43546728_43546883_43546978_43551570_43551688_43552016_43552276_43552796_43552909_43552981_43553092_43553400_43553513_43553608_43553684_43554645_43554805_43560909_43561021_43575407
H1_mix_00045772	chr19	-	9680	3	FSM	ENSG00000167378.10	ENST00000422989.6	9686	3	0	6	0	-6	multi-exon	FALSE	canonical	3	26	junction_1	7	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTAAGGGGTCATGGTGGT	2	True	NA	-11	True	AATAAA	-14	NA	43596134	43584372	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_43593368_43594808_43595341_43595981
H1_mix_00045773	chr19	-	1167	3	FSM	ENSG00000131116.12	ENST00000300811.8	1162	3	0	-5	0	5	multi-exon	FALSE	canonical	3	175	junction_2	57	215	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCTGGGTGAGTCATTT	-16	True	NA	4	True	AATAGA	-23	NA	43619629	43607218	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_43608108_43614228_43614435_43619557
H1_mix_00045775	chr19	-	1793	7	NIC	ENSG00000011422.12	novel	1368	7	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	3	18	junction_6	33.5939809423586	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAAGGCCAGGTATGCCCT	6064	False	NA	-22	True	CATAAA	-16	NA	43668307	43648580	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_43649144_43652224_43652372_43655438_43655574_43656478_43656641_43665315_43665460_43667580_43667692_43667776
H1_mix_00045776	chr19	-	1368	7	FSM	ENSG00000011422.12	ENST00000340093.8	1368	7	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_6	17.2626765016321	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGCCAGGTATGCCCTTC	-2	True	NA	-20	True	CATAAA	-18	NA	43670169	43648578	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_43649144_43652224_43652372_43655438_43655574_43656478_43656641_43665315_43665460_43667580_43667692_43670065
H1_mix_00045777	chr19	-	1981	6	ISM	ENSG00000011422.12	ENST00000340093.8	1368	7	1849	-88	0	85	3prime_fragment	FALSE	canonical	3	98	junction_2	7.97496081495075	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGTTTGAGGCCCCTGC	1	True	NA	68	True	GATAAA	-40	NA	43668320	43648490	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_43649144_43652224_43652372_43655438_43655574_43656478_43656641_43665315_43665460_43667580
H1_mix_00045780	chr19	-	5440	14	FSM	ENSG00000105771.14	ENST00000270066.11	5491	14	0	51	0	-51	multi-exon	FALSE	canonical	3	73	junction_8	28.4157636058188	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCTCTAACTTTGCAAAT	-27	True	NA	NA	False	NA	NA	NA	43754962	43728033	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_43731675_43732857_43733003_43733323_43733453_43733625_43733734_43734388_43734496_43737596_43737683_43738121_43738218_43740106_43740219_43744771_43744885_43747441_43747540_43747632_43747898_43747977_43748053_43750591_43750748_43754653
H1_mix_00045782	chr19	-	2387	13	FSM	ENSG00000105771.14	ENST00000601170.5	2387	13	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_7	28.9639383064911	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAGAAAAATTGGAAAGA	-27	True	NA	NA	False	NA	NA	NA	43754962	43732269	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_43733003_43733323_43733453_43733625_43733734_43734388_43734496_43737596_43737683_43738121_43738218_43740106_43740219_43744771_43744885_43747441_43747540_43747632_43747898_43747977_43748053_43750591_43750748_43754653
H1_mix_00045783	chr19	-	696	3	FSM	ENSG00000104783.15	ENST00000597184.5	631	3	180	-245	0	9	multi-exon	FALSE	canonical	3	4	junction_2	1.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGCCTCTGCTCTTATCT	7149	False	NA	-50	True	NA	NA	NA	43768977	43766576	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_43767090_43767539_43767708_43768962
H1_mix_00045784	chr19	-	1848	2	FSM	ENSG00000176222.9	ENST00000324394.7	1844	2	0	-4	0	2	multi-exon	FALSE	canonical	3	18	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTATGAGTGTGATATTTT	3811	False	NA	-7	True	AATAAA	-17	NA	43880142	43872362	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_43874078_43880009
H1_mix_00045785	chr19	-	1851	3	FSM	ENSG00000176222.9	ENST00000587539.2	1849	3	0	-2	0	2	multi-exon	FALSE	canonical	3	13	junction_2	2.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTATGAGTGTGATATTTT	NA	False	NA	-7	True	AATAAA	-17	NA	43883964	43872362	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_43874078_43880009_43880137_43883955
H1_mix_00045787	chr19	-	6164	12	NNC	ENSG00000124459.12	novel	3926	10	NA	NA	9	2049	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_8	19.4379708494432	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAATGTTTTTCCC	12	True	NA	NA	False	NA	NA	NA	43935269	43910574	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_43915201_43918869_43918963_43919572_43919700_43922170_43922218_43924237_43924311_43924401_43924562_43925324_43925459_43929917_43930001_43931246_43931366_43932603_43932691_43934425_43934695_43934923
H1_mix_00045788	chr19	-	5962	10	FSM	ENSG00000124459.12	ENST00000269973.10	3926	10	13	-2049	9	2049	multi-exon	FALSE	canonical	3	26	junction_7	14.9369043349387	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAATGTTTTTCCC	12	True	NA	NA	False	NA	NA	NA	43935269	43910574	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_43915201_43918869_43918963_43919572_43919700_43922170_43922218_43924237_43924311_43924401_43924562_43925324_43925459_43932603_43932691_43934425_43934695_43934923
H1_mix_00045790	chr19	-	5536	2	FSM	ENSG00000186019.12	ENST00000661725.1	5693	2	27	130	-11	-130	multi-exon	FALSE	canonical	3	24	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCTAAAAAATAAAGGAAAAA	-5	True	NA	NA	False	TATAAA	-23	NA	44113156	44103136	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_44108338_44112821
H1_mix_00045792	chr19	-	3315	5	FSM	ENSG00000159917.17	ENST00000291182.9	3190	5	7	-132	1	132	multi-exon	TRUE	canonical	3	5	junction_1	8.0156097709407	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTAAAAGGAAGTGGCAGG	-6	True	NA	NA	False	NA	NA	NA	44305018	44286215	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_44289197_44298807_44298904_44299605_44299733_44303389_44303453_44304970
H1_mix_00045793	chr19	-	3254	5	FSM	ENSG00000159917.17	ENST00000650576.1	3162	5	-76	-16	-55	0	multi-exon	FALSE	canonical	3	11	junction_1	5.52268050859363	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTTCCTTTCATTATT	NA	False	NA	NA	False	AGTAAA	-16	NA	44305101	44286347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_44289197_44298819_44298904_44299605_44299733_44303389_44303453_44304970
H1_mix_00045794	chr19	-	3973	4	NNC	ENSG00000062370.17	novel	3660	4	NA	NA	56	74	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	7.34846922834953	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCCAATCCACACCTCC	84	False	NA	72	True	NA	NA	NA	44356618	44326480	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_44329937_44336622_44336719_44340415_44340543_44356324
H1_mix_00045796	chr19	-	5441	6	FSM	ENSG00000278318.5	ENST00000620012.4	5384	6	-8	-49	7	45	multi-exon	FALSE	canonical	2	9	junction_1	7.62627038597505	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGGCATACAAATGAGTG	9	True	NA	48	True	NA	NA	NA	44448454	44426205	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_44430543_44431766_44432367_44442562_44442622_44442813_44443025_44447512_44447601_44448308
H1_mix_00045797	chr19	-	4260	5	FSM	ENSG00000167384.11	ENST00000592529.6	4248	5	3	-15	0	0	multi-exon	FALSE	canonical	3	20	junction_4	15.4979837398289	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTCATATTCAGTGAC	-3	True	NA	NA	False	AATAAA	-30	NA	44500519	44474427	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_44478147_44479282_44479410_44484360_44484436_44497283_44497378_44500274
H1_mix_00045799	chr19	-	758	6	FSM	ENSG00000007255.10	ENST00000585934.1	758	6	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_5	177.73080768398	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGACTCAGAGCAGTGGGG	3	True	NA	-10	True	AATAAA	-17	NA	45178237	45162932	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45163224_45163915_45164010_45164163_45164248_45164852_45164971_45165126_45165195_45178134
H1_mix_00045800	chr19	-	800	6	FSM	ENSG00000007255.10	ENST00000006275.8	805	6	0	5	0	0	multi-exon	FALSE	canonical	3	287	junction_5	167.378134772735	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGACTCAGAGCAGTGGGG	3	True	NA	-10	True	AATAAA	-17	NA	45178237	45162932	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45163224_45163915_45164010_45164163_45164248_45164852_45164971_45165126_45165195_45178092
H1_mix_00045801	chr19	-	690	5	FSM	ENSG00000007255.10	ENST00000588062.5	695	5	0	5	0	0	multi-exon	FALSE	canonical	3	109	junction_4	259.259522486639	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGACTCAGAGCAGTGGGG	3	True	NA	-10	True	AATAAA	-17	NA	45178237	45162932	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45163224_45163915_45164010_45164163_45164248_45164852_45164971_45178134
H1_mix_00045805	chr19	-	3110	24	FSM	ENSG00000104884.17	ENST00000682414.1	3110	24	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	37.8921961031536	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTGTGGAGGATTTCTT	-15	True	NA	NA	False	GGGGCT	-30	NA	45370588	45350412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45351031_45351467_45351722_45352208_45352353_45352505_45352650_45352745_45352817_45353082_45353156_45353241_45353335_45354729_45354852_45355664_45355729_45357269_45357372_45357473_45357544_45357629_45357700_45361523_45361643_45363742_45363912_45363985_45364120_45364234_45364332_45364423_45364548_45364837_45364955_45365041_45365159_45368629_45368744_45368929_45368993_45369069_45369148_45370132_45370233_45370535
H1_mix_00045806	chr19	-	2853	22	FSM	ENSG00000104884.17	ENST00000391944.8	2853	22	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_21	17.929946826393	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGAGTCTTGCCTGGCC	-15	True	NA	-8	True	CATAAA	-14	NA	45370588	45351593	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45352353_45352505_45352650_45352745_45352817_45353082_45353156_45353241_45353335_45354729_45354852_45355664_45355729_45357269_45357372_45357473_45357544_45357629_45357700_45361523_45361643_45363742_45363912_45363985_45364120_45364234_45364332_45364423_45364548_45364837_45364955_45365041_45365159_45368629_45368744_45368929_45368993_45369069_45369148_45370132_45370233_45370535
H1_mix_00045807	chr19	-	3266	12	FSM	ENSG00000104884.17	ENST00000391942.6	1488	12	-1777	-1	349	0	multi-exon	FALSE	canonical	3	153	junction_8	10.3484737565937	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGAGTCTTGCCTGGCC	6865	False	NA	-8	True	CATAAA	-14	NA	45363708	45351593	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45351722_45352208_45352353_45352505_45352650_45352745_45352817_45353082_45353156_45353241_45353335_45354729_45354852_45355664_45355729_45357269_45357372_45357473_45357544_45357629_45357700_45361523
H1_mix_00045808	chr19	-	2479	21	FSM	ENSG00000104884.17	ENST00000391941.6	2871	21	392	0	2	0	multi-exon	FALSE	canonical	3	144	junction_12	14.979569419713	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGCCTGCGTCCCCCTC	47	False	NA	NA	False	NA	NA	NA	45370526	45352208	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45352353_45352505_45352650_45352745_45352817_45353082_45353156_45353241_45353335_45354729_45354852_45355664_45355729_45357269_45357372_45357473_45357544_45357629_45357700_45361523_45361643_45363742_45363912_45363985_45364120_45364234_45364332_45364423_45364548_45364837_45364955_45365041_45365159_45368629_45368744_45368929_45368993_45369069_45369148_45370132
H1_mix_00045809	chr19	-	823	9	FSM	ENSG00000104884.17	ENST00000587376.6	823	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	55.5403850814882	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAATGGCCGCGGGGCCAT	6516	False	NA	NA	False	NA	NA	NA	45364057	45353149	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45353156_45353241_45353335_45354729_45354852_45357269_45357372_45357473_45357544_45357629_45357700_45361523_45361643_45363742_45363912_45363985
H1_mix_00045810	chr19	-	2512	6	FSM	ENSG00000104881.16	ENST00000587270.5	2512	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_5	12.8280941686597	5658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTTCTTCTCTTTTGA	3484	False	NA	-4	True	AATAAA	-18	NA	45393167	45379637	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45380229_45382526_45382727_45385561_45385729_45385823_45385958_45386048_45386181_45391879
H1_mix_00045812	chr19	-	3122	13	FSM	ENSG00000104881.16	ENST00000418234.6	3118	13	0	-4	0	4	multi-exon	TRUE	canonical	3	8	junction_6	22.0924509479797	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTTCTCTTTTGATTCT	2	True	NA	0	True	AATAAA	-22	NA	45406349	45379633	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45380229_45382526_45382727_45385561_45385729_45385823_45385958_45386048_45386181_45391879_45392341_45395435_45395887_45396167_45396260_45396337_45396437_45396544_45397059_45398004_45398148_45398263_45398340_45406291
H1_mix_00045813	chr19	-	3379	10	FSM	ENSG00000012061.16	ENST00000300853.8	3379	10	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_9	88.6012011177398	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGACTCACCTCTAAT	-18	True	NA	-7	True	AATAAA	-19	NA	45423917	45407333	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45409726_45413676_45413746_45413962_45414035_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269_45423382_45423780
H1_mix_00045814	chr19	-	1082	9	ISM	ENSG00000012061.16	ENST00000589165.5	1453	10	866	-54	0	0	3prime_fragment	FALSE	canonical	3	253	junction_1	77.8873385089001	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGCTGCGCTGGTGCA	26	True	NA	-8	True	AATAAA	-22	NA	45423501	45409613	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_45409726_45413676_45413746_45413962_45414035_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269
H1_mix_00045815	chr19	-	841	6	FSM	ENSG00000012061.16	ENST00000591636.5	836	6	0	-5	0	0	multi-exon	FALSE	canonical	3	27	junction_1	160.481276166411	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGCTGCGCTGGTGCA	26	True	NA	-8	True	AATAAA	-22	NA	45423501	45409613	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45409726_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269
H1_mix_00045817	chr19	-	1453	10	FSM	ENSG00000012061.16	ENST00000589165.5	1453	10	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_9	100.162090854996	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGCCAAGGAAACCCCCA	14	True	NA	-62	True	NA	NA	NA	45424367	45409667	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45409726_45413676_45413746_45413962_45414035_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269_45423382_45423822
H1_mix_00045818	chr19	-	1274	8	FSM	ENSG00000012061.16	ENST00000013807.9	1278	8	4	0	4	0	multi-exon	FALSE	canonical	3	272	junction_1	75.338691038184	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGTGTGAGCTTGCTAC	-35	True	NA	1	True	AATAAA	-17	NA	45423562	45413433	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45413746_45413962_45414035_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269
H1_mix_00045821	chr19	-	2064	10	FSM	ENSG00000125744.12	ENST00000344680.8	2063	10	2	-3	2	3	multi-exon	FALSE	canonical	3	70	junction_6	22.5684145064143	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCCTCTTGTGCTTCCAG	257	False	NA	-1	True	AATAAA	-19	NA	45497053	45485290	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45485790_45486054_45486114_45488470_45488518_45488636_45488707_45488847_45488987_45489345_45489554_45494165_45494421_45494525_45495006_45495094_45495140_45496791
H1_mix_00045822	chr19	-	2272	2	FSM	ENSG00000125741.5	ENST00000323060.3	2250	2	0	-22	0	22	multi-exon	FALSE	canonical	0	0	junction_1	0	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGGAAAGAAGCTGGGAG	7572	False	NA	NA	False	ATTAAA	-17	NA	45584842	45527404	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45529457_45584622
H1_mix_00045823	chr19	-	7811	2	FSM	ENSG00000125741.5	ENST00000263275.5	7811	2	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGCAGCCCGGTTTAAT	-13	True	NA	NA	False	ATTAAA	-14	NA	45584802	45546280	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45553912_45584622
H1_mix_00045824	chr19	-	2903	2	FSM	ENSG00000177464.5	ENST00000323040.5	3052	2	47	102	47	-102	multi-exon	FALSE	canonical	3	4	junction_1	0	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGCTGGGGACACAACAAT	23	True	NA	NA	False	NA	NA	NA	45602165	45589865	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45592698_45602094
H1_mix_00045825	chr19	-	2231	19	FSM	ENSG00000125746.18	ENST00000245925.8	2234	19	0	3	0	-1	multi-exon	FALSE	canonical	3	9	junction_18	18.8863560393329	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGTGTGTCAGGGTCTAT	2	True	NA	22	True	AATAAA	-12	NA	45639397	45609402	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45609789_45613540_45613672_45614604_45614701_45615801_45615890_45616460_45616559_45616764_45616854_45617629_45617698_45619059_45619192_45621206_45621333_45621482_45621638_45624718_45624819_45626704_45626840_45629950_45630047_45632860_45632972_45633069_45633140_45634321_45634472_45638504_45638635_45638844_45638874_45639356
H1_mix_00045826	chr19	-	2797	22	FSM	ENSG00000125746.18	ENST00000536630.5	2791	22	0	-6	0	4	multi-exon	FALSE	canonical	3	17	junction_18	20.4251856446099	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGGGTCTATGTATTTG	-13	True	NA	29	True	AATAAA	-19	NA	45643727	45609395	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45609789_45613540_45613672_45614604_45614701_45615801_45615890_45616460_45616559_45616764_45616854_45617629_45617698_45619059_45619192_45621206_45621333_45621482_45621638_45624718_45624819_45626704_45626840_45629950_45630047_45632860_45632972_45633069_45633140_45634321_45634472_45638504_45638635_45638844_45638874_45641640_45641749_45641917_45642042_45642133_45642353_45643578
H1_mix_00045827	chr19	-	2956	22	FSM	ENSG00000125746.18	ENST00000587152.6	2974	22	22	-4	22	4	multi-exon	FALSE	canonical	2	7	junction_21	21.5902892423691	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGGGTCTATGTATTTG	9	True	NA	29	True	AATAAA	-19	NA	45645580	45609395	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45609789_45613540_45613672_45614604_45614701_45615801_45615890_45616460_45616559_45616764_45616854_45617629_45617698_45619059_45619192_45621206_45621333_45621482_45621638_45624718_45624819_45626704_45626840_45629950_45630047_45632860_45632972_45633069_45633140_45634321_45634472_45638504_45638635_45638844_45638874_45641640_45641749_45641917_45642042_45642133_45642353_45645272
H1_mix_00045833	chr19	-	515	3	FSM	ENSG00000125743.11	ENST00000342669.8	515	3	0	0	0	0	multi-exon	FALSE	canonical	3	6943	junction_2	785	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTATCTGTTTCCAGAGC	-12	True	NA	-17	True	AATAAA	-19	NA	45691953	45687459	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45687728_45688386_45688567_45691886
H1_mix_00045834	chr19	-	596	4	FSM	ENSG00000125743.11	ENST00000587367.5	596	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	4005.0528918688	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGGTATCTGTTTCCAGA	1	True	NA	-19	True	AATAAA	-17	NA	45691940	45687461	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45687728_45688386_45688567_45690571_45690668_45691886
H1_mix_00045835	chr19	-	616	4	FSM	ENSG00000125743.11	ENST00000391932.7	615	4	0	-1	0	0	multi-exon	FALSE	canonical	3	132	junction_3	3932.58543737097	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGGTATCTGTTTCCAGA	0	True	NA	-19	True	AATAAA	-17	NA	45691941	45687461	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45687728_45688386_45688567_45689232_45689348_45691886
H1_mix_00045839	chr19	-	2998	2	FSM	ENSG00000177051.6	ENST00000317683.4	2993	2	0	-5	0	5	multi-exon	FALSE	canonical	3	74	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCAGACTGGTTTGTGTG	0	True	NA	-5	True	TATAAA	-20	NA	45730896	45710623	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45713574_45730848
H1_mix_00045844	chr19	-	10309	21	Fusion	ENSG00000185800.12_ENSG00000104936.20_ENSG00000177045.11	novel	2548	15	NA	NA	0	0	intron_retention	TRUE	non_canonical	0	0	junction_3	44.8758286831564	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGGGTCTGGGGTGCCTT	-24	True	NA	-7	True	AATAAA	-21	NA	45792802	45764784	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_-_45766112_45766349_45767156_45768041_45770205_45770231_45770641_45770970_45771057_45771349_45771397_45771567_45771666_45771770_45771929_45772640_45772753_45774948_45775035_45777341_45777591_45777666_45777874_45778126_45778221_45778492_45778642_45779263_45779360_45779438_45779523_45779777_45779870_45782192_45784291_45785593_45786872_45790904_45791088_45792315
H1_mix_00045846	chr19	-	3243	14	FSM	ENSG00000104936.20	ENST00000682335.1	3243	14	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	12.9820084878534	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCACAGTGTCCGCGGTTT	6168	False	NA	-1	True	AATAAA	-29	NA	45780603	45769708	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45770641_45770970_45771061_45771349_45771397_45771567_45771666_45771770_45771929_45772640_45772753_45774948_45775035_45777326_45777591_45777666_45777874_45778126_45778221_45778492_45778642_45779263_45779360_45779438_45779523_45779777
H1_mix_00045851	chr19	-	7363	20	Fusion	ENSG00000185800.12_ENSG00000104936.20	novel	2754	15	NA	NA	0	0	intron_retention	TRUE	non_canonical	0	0	junction_1	45.0237856497899	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCACCCCCGACCCTCGC	-24	True	NA	-56	True	NA	NA	NA	45792802	45769763	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_-_45770205_45770249_45770641_45770970_45771061_45771349_45771397_45771567_45771666_45771770_45771929_45772640_45772753_45774948_45775035_45777326_45777591_45777666_45777874_45778126_45778221_45778492_45778642_45779263_45779360_45779438_45779523_45779777_45781535_45783024_45784291_45784640_45784716_45785593_45786872_45790904_45791088_45792315
H1_mix_00045858	chr19	-	2337	2	FSM	ENSG00000185800.12	ENST00000598237.1	643	2	-390	-1304	18	-4	multi-exon	FALSE	canonical	3	197	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACAAATAGTTTTTGAGC	0	True	NA	NA	False	ATTAAA	-19	NA	45792827	45789262	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45791088_45792315
H1_mix_00045860	chr19	-	4108	27	FSM	ENSG00000125755.19	ENST00000245934.12	4077	27	17	-48	0	48	multi-exon	TRUE	canonical	3	254	junction_18	39.3996365585616	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCGGGATCGGGAGTGCG	68	False	NA	80	True	NA	NA	NA	45863130	45815361	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45815698_45815850_45816184_45816481_45816578_45816797_45816975_45817958_45818147_45821383_45821486_45822755_45822847_45823371_45823473_45823766_45823876_45825170_45825332_45826225_45826374_45827509_45827624_45827836_45827919_45828969_45829206_45830053_45830205_45831383_45831589_45835077_45835229_45838460_45838616_45842249_45842490_45844029_45844201_45847751_45848002_45848749_45848877_45852311_45852386_45852481_45852536_45854174_45854241_45854390_45854508_45863057
H1_mix_00045862	chr19	-	995	4	FSM	ENSG00000125755.19	ENST00000598364.1	995	4	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_3	71.4345076898336	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGATGTGAACTTGGGC	NA	False	NA	12	True	AAAAAG	-4	NA	45817133	45815467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45815698_45815850_45816184_45816481_45816578_45816797
H1_mix_00045863	chr19	-	653	4	FSM	ENSG00000125755.19	ENST00000596824.1	653	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	162.485554913523	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCCGCGCTGTTGGACTC	NA	False	NA	NA	False	GGGGCT	-5	NA	45818013	45815895	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45816184_45816481_45816615_45816797_45816975_45817958
H1_mix_00045865	chr19	-	5450	22	FSM	ENSG00000125755.19	ENST00000599460.5	5449	22	0	-1	0	1	multi-exon	FALSE	canonical	3	254	junction_13	20.8428957646215	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACATGGCAAGTGGTGTT	68	False	NA	-5	True	AATAAA	-17	NA	45863130	45818911	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45821486_45822755_45822847_45823371_45823473_45823766_45823876_45825170_45825332_45826225_45826374_45827509_45827624_45827836_45827919_45828969_45829206_45830053_45830205_45831383_45831589_45835077_45835229_45838460_45838616_45842249_45842490_45844029_45844201_45847751_45848002_45848749_45848877_45852311_45852386_45852481_45852536_45854174_45854241_45854390_45854508_45863057
H1_mix_00045866	chr19	-	6537	21	FSM	ENSG00000125755.19	ENST00000599814.5	6537	21	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_13	20.7881576865291	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGGGTGCTCTTCTGGCT	7488	False	NA	-48	True	NA	NA	NA	45855710	45818954	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45821486_45822755_45822847_45823371_45823473_45823766_45823876_45825170_45825332_45826225_45826374_45827509_45827624_45827836_45827919_45828969_45829206_45830053_45830205_45831383_45831589_45835077_45835229_45838460_45838616_45842249_45842490_45844029_45844201_45847751_45848002_45848749_45848877_45852311_45852386_45852481_45852536_45854174_45854241_45854390
H1_mix_00045870	chr19	-	1899	3	FSM	ENSG00000176182.6	ENST00000322217.6	1896	3	0	-3	0	3	multi-exon	FALSE	canonical	3	16	junction_1	1	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGGCTCTGTCTGAGAC	2	True	NA	NA	False	AATAAA	-20	NA	45902613	45890019	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45891324_45901274_45901826_45902569
H1_mix_00045871	chr19	-	6811	1	Genic_Genomic	ENSG00000104967.8	novel	NA	NA	NA	NA	22063	1	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTAATGTTGTCTTT	NA	False	NA	-8	True	GATAAA	-15	NA	45940543	45933732	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr19_-_45933700_45940500
H1_mix_00045873	chr19	-	3786	1	FSM	ENSG00000169515.8	ENST00000307522.5	3236	1	-119	-431	-119	431	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGTGTGTATTGTGCA	NA	False	NA	NA	False	NA	NA	NA	46413683	46409897	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_46409900_46413700
H1_mix_00045874	chr19	-	3328	3	FSM	ENSG00000182013.18	ENST00000438932.2	3335	3	0	7	0	5	multi-exon	FALSE	canonical	0	0	junction_1	40.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTAAGTCTCTTGTAGGT	1294	False	NA	-8	True	AATAAA	-20	NA	46471407	46466497	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_46468578_46469937_46471115_46471336
H1_mix_00045875	chr19	-	3686	3	FSM	ENSG00000182013.18	ENST00000313683.15	3684	3	0	-2	0	2	multi-exon	FALSE	canonical	3	65	junction_1	8	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGTTAAGTCTCTTGTA	-37	True	NA	-11	True	AATAAA	-17	NA	46471563	46466500	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_46468578_46469732_46471115_46471336
H1_mix_00045876	chr19	-	2881	4	FSM	ENSG00000197380.11	ENST00000391916.7	2939	4	44	14	0	-14	multi-exon	TRUE	canonical	3	15	junction_2	4.08248290463863	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTGGACTAACATTTATT	26	True	NA	46	True	ATTAAA	-20	NA	46661138	46647564	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_46649873_46652659_46652813_46652978_46653076_46660815
H1_mix_00045878	chr19	-	3586	18	FSM	ENSG00000105287.13	ENST00000291281.9	3588	18	2	0	0	0	multi-exon	FALSE	canonical	3	101	junction_17	35.0648435415753	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGGCACTCTCGAATCATT	-1	True	NA	-7	True	ATTAAA	-39	NA	46717112	46674315	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_46674736_46675032_46675119_46678395_46678664_46681649_46681749_46689536_46689699_46690599_46690707_46691734_46691808_46691932_46691986_46693874_46694134_46697156_46697235_46697732_46697851_46700798_46700953_46701034_46701113_46704168_46704392_46704494_46704650_46710906_46711039_46713862_46714002_46716130
H1_mix_00045879	chr19	-	2927	17	FSM	ENSG00000105287.13	ENST00000600194.5	2923	17	0	-4	0	0	multi-exon	FALSE	canonical	3	145	junction_16	27.1632075379547	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGGCACTCTCGAATCATT	-27	True	NA	-7	True	ATTAAA	-39	NA	46714324	46674315	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_46674736_46675032_46675119_46678395_46678664_46681649_46681749_46689536_46689699_46690599_46690707_46691734_46691808_46691932_46691986_46693874_46694134_46697156_46697235_46697732_46697851_46700798_46700953_46701034_46701113_46704168_46704392_46704494_46704650_46710906_46711039_46713862
H1_mix_00045880	chr19	-	3167	19	NIC	ENSG00000105287.13	novel	3321	19	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_18	54.1161302714408	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGGCACTCTCGAATCATT	3	True	NA	-7	True	ATTAAA	-39	NA	46717108	46674315	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_46674736_46675032_46675119_46678395_46678664_46681649_46681749_46689536_46689699_46690599_46690707_46691734_46691808_46691932_46691986_46693874_46694134_46697156_46697235_46697732_46697851_46700798_46700953_46701034_46701113_46704168_46704392_46704494_46704650_46710906_46711039_46713862_46714002_46716130_46716536_46716950
H1_mix_00045881	chr19	-	3311	19	FSM	ENSG00000105287.13	ENST00000433867.5	3321	19	11	-1	-1	0	multi-exon	FALSE	canonical	3	41	junction_18	48.805136594673	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGGCACTCTCGAATCATT	-5	True	NA	-7	True	ATTAAA	-39	NA	46717116	46674315	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_46674736_46675032_46675119_46678395_46678664_46681649_46681749_46689536_46689699_46690599_46690707_46691734_46691808_46691932_46691986_46693874_46694134_46697156_46697235_46697732_46697851_46700798_46700953_46701034_46701113_46704168_46704392_46704494_46704650_46710906_46711039_46713862_46714002_46716130_46716536_46716814
H1_mix_00045882	chr19	-	1689	10	FSM	ENSG00000105287.13	ENST00000597589.5	1682	10	0	-7	0	0	multi-exon	FALSE	canonical	3	171	junction_6	21.4775219850262	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCATGGCCTTGATCTCA	1	True	NA	-30	True	ATTAAA	-16	NA	46697341	46674338	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_46674736_46675032_46675119_46678395_46678664_46681649_46681749_46689536_46689699_46690599_46690707_46691734_46691808_46691932_46691986_46693874_46694134_46697156
H1_mix_00045884	chr19	-	2908	9	NNC	ENSG00000105281.12	novel	2882	8	NA	NA	0	66574	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	330.558972613057	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCACCAGTCCCATTGGAT	0	True	NA	NA	False	NA	NA	NA	46788594	46708308	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_46708335_46774882_46775748_46776974_46777110_46777210_46777406_46778674_46778909_46782382_46782550_46784096_46784145_46784516_46784560_46787399
H1_mix_00045885	chr19	-	3180	18	FSM	ENSG00000090372.15	ENST00000263280.11	3176	18	0	-4	0	4	multi-exon	FALSE	canonical	3	628	junction_10	80.3036624363549	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGACGGTGCCATCTGTTG	-5	True	NA	-3	True	AATAAA	-18	NA	46746450	46719506	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_46720339_46720535_46720772_46721985_46722073_46722241_46722341_46722809_46722951_46723113_46723285_46724806_46724929_46725331_46725380_46725472_46725649_46727451_46727547_46727893_46728008_46728617_46728778_46730731_46730874_46733038_46733237_46736822_46736902_46738163_46738238_46738784_46738889_46746148
H1_mix_00045886	chr19	-	3611	18	FSM	ENSG00000090372.15	ENST00000391910.7	3628	18	21	-4	3	4	multi-exon	FALSE	canonical	3	139	junction_10	172.280028745349	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGACGGTGCCATCTGTTG	241	False	NA	-3	True	AATAAA	-18	NA	46746860	46719506	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_46720339_46720535_46720772_46721985_46722073_46722241_46722341_46722809_46722951_46723113_46723285_46724806_46724929_46725331_46725380_46725472_46725649_46727451_46727568_46727893_46728008_46728617_46728778_46730731_46730874_46733038_46733237_46736822_46736902_46738163_46738238_46738784_46738889_46746148
H1_mix_00045888	chr19	-	448	2	FSM	ENSG00000090372.15	ENST00000598074.1	448	2	0	0	0	0	multi-exon	FALSE	canonical	3	803	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAGCACCGAGCCTGCCC	8569	False	NA	NA	False	NA	NA	NA	46724892	46722922	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_46723285_46724806
H1_mix_00045891	chr19	-	2031	7	FSM	ENSG00000105281.12	ENST00000594991.5	2031	7	0	0	0	0	multi-exon	FALSE	canonical	3	850	junction_3	74.254068350944	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGTGTTCTTGAGAAT	3689	False	NA	-7	True	AATAAA	-19	NA	46784905	46774884	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_46775748_46776974_46777110_46777210_46777406_46778674_46778909_46782382_46782550_46784096_46784145_46784516
H1_mix_00045892	chr19	-	1724	8	FSM	ENSG00000105281.12	ENST00000412532.6	1750	8	26	0	26	0	multi-exon	FALSE	canonical	3	35	junction_7	341.178150842408	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATTTTTTTTAGCAATAA	1278	False	NA	-5	True	NA	NA	NA	46787316	46774923	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_46775748_46776974_46777110_46777210_46777406_46778674_46778909_46782382_46782550_46784096_46784145_46784516_46784560_46787238
H1_mix_00045893	chr19	-	903	5	FSM	ENSG00000042753.12	ENST00000601498.5	898	5	2	-7	2	7	multi-exon	FALSE	canonical	3	187	junction_4	810.213243535305	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGCCTGTCTCCCCTGGG	-8	True	NA	2	True	AATAAA	-35	NA	46850314	46838150	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_46838549_46838739_46838800_46839464_46839579_46845992_46846143_46850133
H1_mix_00045894	chr19	-	778	5	FSM	ENSG00000042753.12	ENST00000599990.5	829	5	51	0	48	0	multi-exon	FALSE	canonical	1	10	junction_4	885.091909069335	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGCCCTTGCCTGTCTC	9193	False	NA	-5	True	AATAAA	-28	NA	46850718	46838157	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_46838549_46838739_46838800_46839464_46839579_46845992_46846143_46850655
H1_mix_00045895	chr19	-	816	5	FSM	ENSG00000042753.12	ENST00000352203.8	793	5	0	-23	0	23	multi-exon	FALSE	canonical	3	47	junction_3	862.019540091754	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCCTTCAGTCCATCAG	9134	False	NA	40	True	NA	NA	NA	46850777	46838112	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_46838549_46838739_46838800_46839464_46839621_46845992_46846143_46850763
H1_mix_00045896	chr19	-	643	4	FSM	ENSG00000042753.12	ENST00000593442.5	636	4	0	-7	0	7	multi-exon	FALSE	canonical	3	159	junction_3	942.575549580333	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGCCTGTCTCCCCTGGG	16	True	NA	2	True	AATAAA	-35	NA	46850834	46838150	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_46838549_46838739_46838800_46839464_46839579_46850763
H1_mix_00045897	chr19	-	789	5	FSM	ENSG00000042753.12	ENST00000263270.11	789	5	0	0	0	0	multi-exon	FALSE	canonical	3	1451	junction_4	302.386342284171	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCGTCTTTGAGCCCTT	4	True	NA	-14	True	AATAAA	-19	NA	46850846	46838166	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_46838549_46838739_46838800_46839464_46839579_46845992_46846143_46850763
H1_mix_00045899	chr19	-	558	2	FSM	ENSG00000042753.12	ENST00000597421.1	554	2	0	-4	0	4	multi-exon	FALSE	canonical	3	1451	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTGCTGGTGCGTTTT	25	True	NA	1	True	ATTAAA	-26	NA	46850825	46845646	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_46846143_46850763
H1_mix_00045903	chr19	-	655	3	FSM	ENSG00000130748.7	ENST00000253047.7	655	3	0	0	0	0	multi-exon	FALSE	canonical	3	1017	junction_2	15	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCAGAGTATTGGTTCGT	-10	True	NA	-7	True	ATTAAA	-20	NA	47048624	47045908	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_47046253_47046592_47046686_47048406
H1_mix_00045904	chr19	-	4428	4	ISM	ENSG00000130749.10	ENST00000253048.10	6143	15	41311	-35	12890	35	3prime_fragment	FALSE	canonical	2	3	junction_3	9.41629792788369	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCCTTGCCCTGGGAATT	9716	False	NA	32	True	AAAAAG	-35	NA	47072465	47064151	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_47067870_47069091_47069344_47071777_47072122_47072351
H1_mix_00045909	chr19	-	1557	3	NIC	ENSG00000105327.18	novel	1846	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	102	junction_2	69	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATACTCTTTCTGCTTGCCT	1	True	NA	-8	True	AATAAA	-18	NA	47231199	47220823	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_47221919_47226563_47226755_47230928
H1_mix_00045912	chr19	-	2034	13	FSM	ENSG00000105419.18	ENST00000558555.6	2021	13	0	-13	0	13	multi-exon	FALSE	canonical	3	119	junction_8	34.1258903017766	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTGTGTCTATCCCAAG	-12	True	NA	0	True	GATAAA	-30	NA	47419527	47403110	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_47403554_47406459_47406527_47406887_47406972_47407078_47407138_47407351_47407429_47409098_47409248_47409435_47409548_47414716_47414867_47415050_47415102_47416651_47416703_47416803_47416964_47417177_47417351_47419069
H1_mix_00045913	chr19	-	1261	2	FSM	ENSG00000105419.18	ENST00000561040.1	1809	2	548	0	442	0	multi-exon	FALSE	canonical	3	184	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGGCCGGGTGCGGTGGCT	2165	False	NA	NA	False	AAGAAA	-11	NA	47417350	47415875	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_47416964_47417177
H1_mix_00045914	chr19	-	2980	6	NNC	ENSG00000118160.14	novel	1606	8	NA	NA	6438	1116	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	8.44748483277715	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGACCTTTGGCTTTAGGC	NA	False	NA	NA	False	NA	NA	NA	47441184	47426900	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_47426917_47428021_47430466_47432166_47432446_47437461_47437562_47437848_47437974_47441168
H1_mix_00045915	chr19	-	1934	5	ISM	ENSG00000118160.14	ENST00000236877.11	4959	10	54	13320	24	-8930	5prime_fragment	FALSE	canonical	3	12	junction_2	2.8613807855649	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGGGTGACCAGTGGGC	333	False	NA	NA	False	NA	NA	NA	47471839	47441336	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_47441441_47447808_47448232_47456929_47457595_47465728_47466420_47471788
H1_mix_00045916	chr19	-	1646	12	FSM	ENSG00000118162.14	ENST00000338134.8	1636	12	0	-10	0	10	multi-exon	FALSE	canonical	3	144	junction_8	24.4310464994411	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCGATTCTTTTTTTCGG	10	True	NA	-5	True	NA	NA	NA	47484219	47475139	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_47475545_47476531_47476715_47476802_47476939_47477705_47477782_47479862_47479941_47480297_47480408_47480759_47480834_47480957_47481034_47483160_47483216_47483294_47483380_47483501_47483585_47483934
H1_mix_00045918	chr19	-	964	5	ISM	ENSG00000118162.14	ENST00000594208.5	1623	13	4136	-53	3552	10	3prime_fragment	FALSE	canonical	3	160	junction_3	25.4950975679639	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCGATTCTTTTTTTCGG	8266	False	NA	-5	True	NA	NA	NA	47480026	47475139	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_47475545_47476531_47476715_47476802_47476939_47477705_47477782_47479862
H1_mix_00045924	chr19	-	1046	4	ISM	ENSG00000105499.14	ENST00000354276.7	2496	17	48648	2	5797	0	3prime_fragment	FALSE	canonical	3	4	junction_1	13.7679176187089	217	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTGTGTGTGTGTGTCT	NA	False	NA	-3	True	AATAAA	-23	NA	48062134	48047845	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_48048389_48052953_48053148_48054877_48055050_48061997
H1_mix_00045925	chr19	-	968	4	ISM	ENSG00000105499.14	ENST00000599921.6	2486	17	48718	0	5832	0	3prime_fragment	FALSE	canonical	3	29	junction_1	2.49443825784929	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTGTGTGTGTGTGTCT	NA	False	NA	-3	True	AATAAA	-23	NA	48062099	48047845	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_48048389_48052996_48053148_48054877_48055050_48061997
H1_mix_00045926	chr19	-	3125	28	FSM	ENSG00000105486.14	ENST00000263274.12	3125	28	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_22	62.5211075468828	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGACAGGGTCTGTGC	4	True	NA	-7	True	AATAAA	-18	NA	48170344	48115444	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48115733_48115872_48115966_48117637_48117782_48119136_48119191_48121169_48121323_48122933_48123017_48123173_48123319_48127276_48127349_48127909_48128021_48131075_48131172_48132981_48133098_48133980_48134067_48135679_48135780_48136033_48136126_48137007_48137085_48137521_48137689_48139970_48140144_48143542_48143600_48143882_48143964_48149762_48149842_48150087_48150211_48151231_48151340_48153871_48153968_48157013_48157141_48161371_48161508_48162261_48162352_48165549_48165624_48170240
H1_mix_00045928	chr19	-	3957	28	FSM	ENSG00000105486.14	ENST00000601091.5	3957	28	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	106.455114287782	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGAGGGGGTGGCTT	96	False	NA	-86	True	NA	NA	NA	48170252	48115523	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48115733_48115872_48115966_48117637_48117782_48119136_48119191_48120166_48121323_48122933_48123017_48123173_48123319_48127276_48127349_48127909_48128021_48131075_48131172_48132981_48133098_48133980_48134067_48135679_48135780_48136033_48136126_48137007_48137085_48137521_48137689_48139970_48140144_48143542_48143600_48143882_48143964_48149762_48149842_48150087_48150211_48151231_48151340_48153871_48153968_48157013_48157141_48161371_48161508_48162261_48162352_48165549_48165624_48170240
H1_mix_00045932	chr19	-	500	4	FSM	ENSG00000105483.18	ENST00000519332.5	500	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	28.003967972811	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTGGTTTATGTACATT	6	True	NA	-4	True	ATTAAA	-16	NA	48255893	48238333	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48238533_48240961_48241064_48249750_48249848_48255791
H1_mix_00045933	chr19	-	659	5	FSM	ENSG00000105483.18	ENST00000520007.5	614	5	27	-72	0	-2	multi-exon	FALSE	canonical	3	64	junction_3	7.92148975887743	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTTTCTTCTTTGTTAT	28	True	NA	66	True	CATAAA	-15	NA	48255871	48238263	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48238533_48240961_48241064_48249522_48249634_48249750_48249848_48255791
H1_mix_00045934	chr19	-	356	3	FSM	ENSG00000268186.1	ENST00000600941.1	437	3	34	47	34	-47	multi-exon	FALSE	canonical	1	1	junction_2	1.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCCAGCCTCCAGAACTA	NA	False	NA	NA	False	NA	NA	NA	48271249	48262946	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48263185_48270144_48270234_48271220
H1_mix_00045935	chr19	-	2272	7	FSM	ENSG00000161558.11	ENST00000435956.7	2272	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	26.560727065015	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGATGAGGCTACTCTT	-8	True	NA	-20	True	AATAAA	-14	NA	48364059	48332360	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48333434_48334007_48334198_48342529_48342810_48343320_48343452_48345159_48345355_48363290_48363532_48363897
H1_mix_00045940	chr19	-	1550	5	FSM	ENSG00000105438.9	ENST00000330720.7	1550	5	0	0	0	0	multi-exon	FALSE	canonical	3	902	junction_4	108.308298389366	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTCTTTTGCTGCTCCTT	-12	True	NA	-25	True	AATAAA	-16	NA	48391551	48382574	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48383328_48384229_48384483_48389552_48389712_48390423_48390525_48391267
H1_mix_00045941	chr19	-	1597	4	FSM	ENSG00000105438.9	ENST00000597017.5	1594	4	0	-3	0	0	multi-exon	FALSE	canonical	3	1015	junction_2	68.7071078322081	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTCTTTTGCTGCTCCTT	25	True	NA	-25	True	AATAAA	-16	NA	48390855	48382574	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48383328_48384229_48384483_48389552_48389712_48390423
H1_mix_00045942	chr19	-	2222	5	FSM	ENSG00000142235.13	ENST00000648216.1	2222	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	10.4253297309965	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGGGCCTGTGCGTATTT	3174	False	NA	-5	True	AAAAAG	-24	NA	48498405	48485270	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48485790_48491107_48491246_48491403_48491540_48493693_48494110_48497392
H1_mix_00045943	chr19	-	715	1	FSM	ENSG00000142235.13	ENST00000598924.1	454	1	-262	1	13	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	242	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCATGTATCTTTTGTAT	9	True	NA	-25	True	AATAAA	-17	NA	48513922	48513207	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48513200_48513900
H1_mix_00045944	chr19	-	1645	5	FSM	ENSG00000063177.13	ENST00000552347.5	1645	5	0	0	0	0	multi-exon	FALSE	canonical	3	3652	junction_4	655.959221293519	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTGTGTTATTGGGG	131	False	NA	-2	True	ATTAAA	-20	NA	48619163	48615327	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48615448_48615876_48615947_48616078_48617424_48617790_48617878_48619140
H1_mix_00045946	chr19	-	612	6	FSM	ENSG00000063177.13	ENST00000084795.9	612	6	0	0	0	0	multi-exon	FALSE	canonical	3	4648	junction_4	305.609816596261	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTCTGTGTGTGTTATTG	-7	True	NA	-5	True	ATTAAA	-17	NA	48617884	48615330	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48615448_48615876_48615947_48616078_48616203_48616725_48616825_48617315_48617424_48617790
H1_mix_00045947	chr19	-	643	7	FSM	ENSG00000063177.13	ENST00000549920.6	643	7	0	0	0	0	multi-exon	FALSE	canonical	3	3652	junction_6	567.092878930192	2048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTCTGTGTGTGTTATTG	2	True	NA	-5	True	ATTAAA	-17	NA	48619178	48615330	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48615448_48615876_48615947_48616078_48616203_48616725_48616825_48617315_48617424_48617790_48617878_48619140
H1_mix_00045948	chr19	-	2091	4	FSM	ENSG00000063177.13	ENST00000551749.5	2091	4	0	0	0	0	multi-exon	FALSE	canonical	3	3652	junction_3	757.400965289999	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTCTGTGTGTGTTATTG	-3	True	NA	-5	True	ATTAAA	-17	NA	48619183	48615330	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48615947_48616078_48617424_48617790_48617878_48619140
H1_mix_00045949	chr19	-	3844	1	FSM	ENSG00000063177.13	ENST00000547892.1	3844	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTCTGTGTGTGTTATT	5	True	NA	-6	True	ATTAAA	-16	NA	48619175	48615331	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48615300_48619200
H1_mix_00045950	chr19	-	628	7	FSM	ENSG00000063177.13	ENST00000549370.5	628	7	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_5	1748.49487655336	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACAGTGCTCTGTGTGTGT	4	True	NA	-10	True	ATTAAA	-12	NA	48619176	48615335	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48615448_48615876_48615947_48616078_48616203_48616725_48616825_48617315_48617416_48617790_48617878_48619140
H1_mix_00045951	chr19	-	1111	7	FSM	ENSG00000063177.13	ENST00000550973.5	1111	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_6	1863.44746967072	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCGAGGCTACAAAAACTA	167	False	NA	-67	True	NA	NA	NA	48619127	48615392	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48615448_48615876_48615947_48616078_48616203_48616725_48616825_48617315_48617424_48617790_48617878_48618559
H1_mix_00045952	chr19	-	1081	4	FSM	ENSG00000063177.13	ENST00000552705.5	1081	4	0	0	0	0	multi-exon	FALSE	canonical	3	3652	junction_3	739.779696936865	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCTCACCCGGTTCTC	-3	True	NA	NA	False	NA	NA	NA	48619183	48615981	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48616825_48617315_48617424_48617790_48617878_48619140
H1_mix_00045954	chr19	-	771	2	FSM	ENSG00000063180.9	ENST00000599267.1	381	2	-321	-69	0	0	multi-exon	FALSE	canonical	3	513	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATCTTCCTCTTTCTAAA	6928	False	NA	-17	True	ATTAAA	-21	NA	48639459	48637945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48638145_48638887
H1_mix_00045955	chr19	-	1715	9	FSM	ENSG00000063180.9	ENST00000084798.9	1715	9	0	0	0	0	multi-exon	FALSE	canonical	3	453	junction_8	43.015803781866	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATCTTCCTCTTTCTAAA	-12	True	NA	-17	True	ATTAAA	-21	NA	48646187	48637945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48638145_48638887_48639054_48639304_48639460_48639548_48639622_48639787_48639884_48640094_48640281_48644426_48644570_48645402_48645478_48645565
H1_mix_00045956	chr19	-	276	2	FSM	ENSG00000063180.9	ENST00000594088.1	275	2	0	-1	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTGGTCTGATTCTAG	8002	False	NA	-4	True	ATTAAA	-22	NA	48638385	48638014	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48638145_48638239
H1_mix_00045957	chr19	-	1840	7	FSM	ENSG00000142233.14	ENST00000270235.11	1846	7	0	6	0	-6	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	245	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAATTTTTGTCTACAGA	108	False	NA	NA	False	AATAAA	-13	NA	48673017	48661412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48662042_48663462_48663544_48663760_48663815_48664142_48664293_48664578_48664768_48670355_48671007_48672931
H1_mix_00045959	chr19	-	3205	12	FSM	ENSG00000105538.10	ENST00000222145.9	3199	12	0	-6	0	6	multi-exon	FALSE	canonical	2	4	junction_9	31.6700447668959	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATTGTTAAGACTCAGGGG	-8	True	NA	-15	True	AATAAA	-26	NA	48740610	48720578	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48720998_48721853_48722002_48724336_48724510_48724716_48724961_48726784_48726889_48727006_48727159_48727392_48727431_48728936_48729591_48735195_48735552_48738959_48739646_48740145_48740287_48740520
H1_mix_00045962	chr19	-	4123	3	NIC	ENSG00000174951.12	novel	815	3	NA	NA	127	8	intron_retention	FALSE	canonical	2	9	junction_2	32	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTAGCTTTTTTGGAGCC	1823	False	NA	3	True	ATTAAA	-24	NA	48753533	48748002	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_48751284_48752489_48753123_48753324
H1_mix_00045964	chr19	-	1289	9	FSM	ENSG00000105552.15	ENST00000545387.6	1272	9	0	-17	0	17	multi-exon	FALSE	canonical	3	14	junction_8	136.217140533047	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACGTGACTCTGGGGCTTT	41	False	NA	16	True	AATAAA	-35	NA	48811012	48795044	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48795465_48796427_48796503_48796577_48796719_48796936_48797023_48797190_48797334_48799674_48799839_48799980_48800101_48800186_48800298_48810983
H1_mix_00045965	chr19	-	1582	11	FSM	ENSG00000105552.15	ENST00000316273.11	1563	11	0	-19	0	17	multi-exon	FALSE	canonical	3	114	junction_10	94.0372798415607	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACGTGACTCTGGGGCTTT	-3	True	NA	16	True	AATAAA	-35	NA	48811029	48795044	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48795465_48796427_48796503_48796577_48796719_48796936_48797023_48797190_48797334_48799674_48799839_48799980_48800101_48800186_48800298_48806516_48806718_48806999_48807075_48810983
H1_mix_00045966	chr19	-	3538	10	ISM	ENSG00000105552.15	ENST00000597011.5	1579	11	1820	-45	-1304	0	3prime_fragment	FALSE	canonical	3	360	junction_9	33.7071630296317	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGTCGGGCTTCTTCAG	1957	False	NA	-4	True	AATAAA	-15	NA	48809096	48795064	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_48795465_48796427_48796503_48796577_48796719_48796936_48797023_48797190_48797334_48799674_48799839_48799980_48800101_48800186_48800298_48806516_48806718_48806999
H1_mix_00045967	chr19	-	2042	12	FSM	ENSG00000105552.15	ENST00000402551.5	2041	12	0	-1	0	0	multi-exon	TRUE	canonical	2	9	junction_11	152.001359280569	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTCGGGCTTCTTCAGT	-1	True	NA	-3	True	AATAAA	-16	NA	48811027	48795063	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48795465_48796427_48796503_48796577_48796719_48796936_48797023_48797190_48797334_48799674_48799839_48799980_48800101_48800186_48800298_48806516_48806718_48806999_48807075_48807755_48808237_48810983
H1_mix_00045968	chr19	-	1589	11	FSM	ENSG00000105552.15	ENST00000597011.5	1579	11	0	-10	0	0	multi-exon	FALSE	canonical	3	80	junction_10	103.687463080162	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCTGCAATTTTGAAATAA	8	True	NA	-3	True	NA	NA	NA	48810916	48795099	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48795465_48796427_48796503_48796577_48796719_48796936_48797023_48797190_48797334_48799674_48799839_48799980_48800101_48800186_48800298_48806516_48806718_48806999_48807075_48810808
H1_mix_00045972	chr19	-	941	8	NIC	ENSG00000087076.9	novel	1050	9	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	72.4163134174862	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGGATATCGTTATAT	27	True	NA	-8	True	CATAAA	-19	NA	48836479	48813017	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_48813349_48813662_48813731_48815036_48815142_48831667_48831760_48832665_48832733_48834275_48834359_48835804_48835844_48836323
H1_mix_00045975	chr19	-	842	5	FSM	ENSG00000105559.12	ENST00000597129.1	829	5	0	-13	0	0	multi-exon	FALSE	canonical	3	31	junction_2	26.1629509039023	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAATAGCTTTCTTTCTGT	NA	False	NA	-7	True	ATTAAA	-15	NA	48845551	48837096	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48837552_48838016_48838130_48841148_48841311_48845369_48845447_48845516
H1_mix_00045978	chr19	-	3080	20	FSM	ENSG00000105559.12	ENST00000263265.11	3073	20	0	-7	0	7	multi-exon	FALSE	canonical	3	55	junction_12	19.6591453135642	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTCTTTCTGTCTGTCTG	-11	True	NA	0	True	ATTAAA	-22	NA	48868617	48837089	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48837552_48838016_48838130_48839204_48839264_48841148_48841311_48845369_48845447_48845516_48845617_48847899_48848041_48852227_48852327_48853681_48853832_48854006_48854088_48854216_48854265_48857421_48857497_48858859_48859140_48859468_48859685_48860349_48860460_48861400_48861502_48861619_48861693_48865502_48865611_48867536_48867627_48868082
H1_mix_00045980	chr19	-	3578	16	FSM	ENSG00000104812.15	ENST00000323798.8	3569	16	0	-9	0	9	multi-exon	TRUE	canonical	3	139	junction_14	22.3232813199334	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTCAGACATGACACTTGG	-1	True	NA	-14	True	AATACA	-24	NA	48993309	48968120	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48969612_48969774_48969856_48970545_48970710_48970927_48971024_48974212_48974340_48974619_48974734_48977923_48978003_48978097_48978158_48981529_48981637_48982254_48982376_48982719_48982838_48985460_48985606_48985849_48986036_48987193_48987386_48991301_48991484_48992994
H1_mix_00045982	chr19	-	922	1	FSM	ENSG00000225950.8	ENST00000593537.1	932	1	-12	22	-12	-22	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCAGATCAACTCTCATG	2826	False	NA	26	True	AATACA	-5	NA	49062009	49061087	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49061100_49062000
H1_mix_00045983	chr19	-	1292	3	ISM	ENSG00000283663.1	ENST00000599795.5	1748	7	-156	5331	-156	-5331	5prime_fragment	FALSE	canonical	2	11	junction_2	10.5	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTGTTTACTGTTTCTT	7625	False	NA	-10	True	NA	NA	NA	49065232	49061123	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_49062010_49063738_49063863_49064950
H1_mix_00045985	chr19	-	742	1	FSM	ENSG00000221916.4	ENST00000408991.4	742	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCACGTGAACGTCCAGAT	-23	True	NA	-16	True	AATAAA	-35	NA	49119143	49118401	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49118400_49119100
H1_mix_00045986	chr19	-	2357	6	FSM	ENSG00000130528.12	ENST00000252825.9	2357	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	2.48193472919817	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATTGTCAGACGTGGGG	5	True	NA	-10	True	AATAAA	-15	NA	49155396	49151197	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49151333_49151516_49151554_49152003_49152059_49152309_49152379_49153260_49153332_49153406
H1_mix_00045987	chr19	-	2450	11	FSM	ENSG00000074219.14	ENST00000377214.8	2440	11	0	-10	0	5	multi-exon	FALSE	canonical	3	155	junction_7	132.278531893879	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATTTATTTGAGGTTTGG	1987	False	NA	-3	True	GATAAA	-22	NA	49360438	49340589	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355302_49355420_49357251_49357315_49359434_49359500_49359843
H1_mix_00045989	chr19	-	2196	13	FSM	ENSG00000074219.14	ENST00000598810.5	2191	13	0	-5	0	5	multi-exon	FALSE	canonical	3	31	junction_12	189.62235862073	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATTTATTTGAGGTTTGG	11	True	NA	-3	True	GATAAA	-22	NA	49361495	49340589	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355311_49355420_49355958_49355971_49357251_49357315_49359434_49359500_49359843_49360082_49361395
H1_mix_00045992	chr19	-	2169	12	FSM	ENSG00000074219.14	ENST00000601519.5	2167	12	0	-2	0	2	multi-exon	FALSE	canonical	1	4	junction_11	188.798156245375	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGGATTTATTTGAGGTT	18	True	NA	-6	True	GATAAA	-19	NA	49362407	49340592	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355302_49355420_49357251_49357315_49359434_49359500_49359843_49360082_49362328
H1_mix_00045994	chr19	-	2180	13	FSM	ENSG00000074219.14	ENST00000593945.6	2175	13	0	-5	0	5	multi-exon	FALSE	canonical	3	83	junction_12	180.753899604468	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATTTATTTGAGGTTTGG	9	True	NA	-3	True	GATAAA	-22	NA	49362416	49340589	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355311_49355420_49355958_49355971_49357251_49357315_49359434_49359500_49359843_49360082_49362332
H1_mix_00045995	chr19	-	2169	12	FSM	ENSG00000074219.14	ENST00000311227.6	2164	12	0	-5	0	5	multi-exon	FALSE	canonical	3	183	junction_11	121.041554233411	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATTTATTTGAGGTTTGG	-32	True	NA	-3	True	GATAAA	-22	NA	49362457	49340589	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355311_49355420_49357251_49357315_49359434_49359500_49359843_49360082_49362372
H1_mix_00046000	chr19	-	474	2	FSM	ENSG00000104872.11	ENST00000602076.5	474	2	0	0	0	0	multi-exon	FALSE	canonical	3	1000	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTCTCTGACTGGGGA	6592	False	NA	-8	True	AATAAA	-15	NA	49446899	49446298	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49446424_49446550
H1_mix_00046001	chr19	-	423	3	FSM	ENSG00000104872.11	ENST00000595633.5	424	3	0	1	0	0	multi-exon	FALSE	canonical	3	1000	junction_1	32.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTCTCTGACTGGGGA	6314	False	NA	-8	True	AATAAA	-15	NA	49447177	49446298	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49446424_49446550_49446695_49447023
H1_mix_00046003	chr19	-	1427	9	FSM	ENSG00000104872.11	ENST00000262265.10	1197	9	0	-230	0	230	multi-exon	FALSE	canonical	3	780	junction_3	87.0972875582242	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGGTCCAAGCCCCTCAG	1	True	NA	NA	False	NA	NA	NA	49451814	49446067	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49446424_49446550_49446695_49447023_49447100_49447337_49447468_49447826_49447909_49448000_49448063_49449474_49449655_49450781_49450849_49451484
H1_mix_00046004	chr19	-	992	10	FSM	ENSG00000104872.11	ENST00000596049.5	992	10	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_9	292.334325772208	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCTTCTGAGATGTGGA	-3	True	NA	-78	True	NA	NA	NA	49453494	49446368	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49446424_49446550_49446695_49447023_49447100_49447337_49447468_49447826_49447909_49448000_49448063_49449474_49449655_49450781_49450849_49451484_49451579_49453392
H1_mix_00046006	chr19	-	1256	9	FSM	ENSG00000142546.14	ENST00000596358.6	1232	9	0	-24	0	24	multi-exon	FALSE	canonical	3	469	junction_8	65.5552009759714	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTACTAAAAATACAAAAATT	-1	True	NA	NA	False	NA	NA	NA	49580556	49555443	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49555823_49556316_49556426_49556548_49556737_49556874_49556994_49557089_49557250_49558896_49558979_49559933_49560040_49560621_49560693_49580514
H1_mix_00046007	chr19	-	872	4	FSM	ENSG00000142546.14	ENST00000596477.1	865	4	0	-7	0	0	multi-exon	FALSE	canonical	3	556	junction_3	47.7865624998865	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACGTGGCGCCTTCATTCG	3514	False	NA	-4	True	AATAAA	-18	NA	49557295	49555710	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49555823_49556316_49556426_49556548_49556994_49557089
H1_mix_00046010	chr19	-	986	6	FSM	ENSG00000126458.4	ENST00000246792.4	986	6	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_2	15.816447135814	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGTGCTTTCTAAAAAGG	-23	True	NA	-21	True	AATAAA	-18	NA	49640143	49635291	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49635661_49635733_49635853_49636618_49636728_49636823_49636927_49637042_49637131_49639945
H1_mix_00046012	chr19	-	559	2	FSM	ENSG00000126456.16	ENST00000596644.5	550	2	0	-9	0	3	multi-exon	FALSE	canonical	3	506	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGTGTCTGGTGTTGGGT	4832	False	NA	1	True	AATAAA	-23	NA	49661003	49659565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49659834_49660712
H1_mix_00046013	chr19	-	1697	7	FSM	ENSG00000126456.16	ENST00000309877.11	1691	7	0	-6	0	3	multi-exon	FALSE	canonical	3	372	junction_2	44.5972719644001	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGTGTCTGGTGTTGGGT	666	False	NA	1	True	AATAAA	-23	NA	49665169	49659565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664673
H1_mix_00046014	chr19	-	1575	8	NIC	ENSG00000126456.16	novel	1595	8	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	90	junction_7	122.800319084874	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTTGTGCGTGTCTGGTG	-6	True	NA	-5	True	AATAAA	-17	NA	49665841	49659571	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664673_49664847_49665634
H1_mix_00046015	chr19	-	1601	8	FSM	ENSG00000126456.16	ENST00000377139.8	1595	8	0	-6	0	3	multi-exon	FALSE	canonical	3	188	junction_7	91.2355104515064	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGTGTCTGGTGTTGGGT	-22	True	NA	1	True	AATAAA	-23	NA	49665857	49659565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664673_49664847_49665630
H1_mix_00046016	chr19	-	1739	8	FSM	ENSG00000126456.16	ENST00000597198.5	1741	8	0	2	0	0	multi-exon	FALSE	canonical	2	13	junction_7	148.452699812542	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCACTTGTGCGTGTCTG	-22	True	NA	-8	True	AATAAA	-14	NA	49665857	49659574	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664673_49664847_49665483
H1_mix_00046017	chr19	-	2876	7	FSM	ENSG00000126456.16	ENST00000597636.5	2874	7	0	-2	0	0	multi-exon	FALSE	canonical	2	11	junction_2	161.01311195745	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCACTTGTGCGTGTCTGGT	-22	True	NA	-6	True	AATAAA	-16	NA	49665857	49659572	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49659834_49660712_49660829_49661449_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664673
H1_mix_00046018	chr19	-	1446	7	FSM	ENSG00000126456.16	ENST00000377135.8	1442	7	0	-4	0	3	multi-exon	FALSE	canonical	2	34	junction_6	151.343703756273	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGTGTCTGGTGTTGGGT	NA	False	NA	1	True	AATAAA	-23	NA	49665875	49659565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49665630
H1_mix_00046019	chr19	-	1068	7	FSM	ENSG00000126456.16	ENST00000599223.5	1055	7	0	-13	0	3	multi-exon	FALSE	canonical	3	15	junction_2	171.413162336567	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGTGTCTGGTGTTGGGT	130	False	NA	1	True	AATAAA	-23	NA	49665705	49659565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49659834_49660712_49660829_49662424_49662618_49663187_49663259_49663342_49663515_49664673_49664847_49665630
H1_mix_00046023	chr19	-	254	1	FSM	ENSG00000126467.11	ENST00000599325.1	579	1	148	177	148	-170	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATGGCCACTCTGGACC	NA	False	NA	NA	False	NA	NA	NA	49740183	49739929	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49739900_49740200
H1_mix_00046024	chr19	-	1541	10	FSM	ENSG00000010361.14	ENST00000525130.5	1538	10	0	-3	0	0	multi-exon	FALSE	canonical	3	21	junction_8	72.928850833882	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGTGTCTTCTCTGTCA	7036	False	NA	-6	True	AATAAA	-41	NA	49813190	49806865	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49807375_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49809377_49809576_49811362_49811468_49811630_49811700_49812614_49812737_49812995
H1_mix_00046025	chr19	-	1548	11	FSM	ENSG00000010361.14	ENST00000533418.5	1524	11	0	-24	0	0	multi-exon	FALSE	canonical	3	26	junction_10	69.5589677899263	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGTGTCTTCTCTGTCA	6977	False	NA	-6	True	AATAAA	-41	NA	49813249	49806865	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49807375_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49809377_49809576_49811362_49811468_49811630_49811700_49812250_49812336_49812614_49812737_49813132
H1_mix_00046026	chr19	-	1728	11	FSM	ENSG00000010361.14	ENST00000313777.9	1728	11	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_9	34.4158393766591	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGTGTCTTCTCTGTCA	-10	True	NA	-6	True	AATAAA	-41	NA	49813292	49806865	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49807375_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49809377_49809576_49811362_49811468_49811630_49811700_49812250_49812336_49812614_49812737_49812995
H1_mix_00046027	chr19	-	1632	11	FSM	ENSG00000010361.14	ENST00000377092.8	1632	11	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_9	61.9044424900184	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGAACAAAAATAAAAATACA	9	True	NA	-60	True	NA	NA	NA	49813273	49806919	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49807375_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49809377_49809576_49811362_49811468_49811630_49811700_49812250_49812336_49812637_49812737_49812995
H1_mix_00046028	chr19	-	1794	11	NIC	ENSG00000010361.14	novel	1728	11	NA	NA	-7	-12	combination_of_known_junctions	FALSE	canonical	3	38	junction_9	64.8676344566379	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAGCAGCAGATGAACAAA	6970	False	NA	-72	True	NA	NA	NA	49813256	49806931	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_49807375_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49809377_49809576_49811362_49811468_49811630_49811700_49812250_49812336_49812446_49812737_49812995
H1_mix_00046035	chr19	-	1723	16	FSM	ENSG00000039650.12	ENST00000593946.5	1723	16	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_15	68.7395729466578	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCCGGCATTTTGCTG	-3	True	NA	-2	True	AATAAA	-17	NA	49867234	49861203	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49861366_49861448_49861511_49861607_49861696_49861771_49861882_49862043_49862106_49862184_49862282_49862370_49862464_49862537_49862609_49862689_49862739_49863688_49863761_49863963_49864072_49864178_49864237_49864323_49864404_49865126_49865427_49866398_49866529_49867053
H1_mix_00046036	chr19	-	1731	17	FSM	ENSG00000039650.12	ENST00000322344.8	1731	17	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_16	30.1080735642452	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCCGGCATTTTGCTG	-12	True	NA	-2	True	AATAAA	-17	NA	49867576	49861203	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49861366_49861448_49861511_49861607_49861696_49861771_49861882_49862043_49862106_49862184_49862282_49862370_49862464_49862537_49862609_49862689_49862739_49863688_49863761_49863963_49864072_49864178_49864237_49864323_49864404_49865126_49865427_49866398_49866446_49867053_49867218_49867468
H1_mix_00046037	chr19	-	1665	16	FSM	ENSG00000039650.12	ENST00000596014.5	1665	16	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_7	22.7639090570042	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACAATAAACGCTGTTTC	10036	False	NA	-29	True	NA	NA	NA	49867286	49861230	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49861366_49861448_49861511_49861607_49861696_49861771_49861882_49862043_49862106_49862184_49862282_49862370_49862464_49862537_49862609_49862689_49862739_49863688_49863761_49863963_49864072_49864178_49864237_49864323_49864404_49865126_49865427_49866398_49866446_49867053
H1_mix_00046039	chr19	-	4801	4	FSM	ENSG00000204673.11	ENST00000391833.5	3640	4	-1070	-91	-106	86	multi-exon	FALSE	canonical	3	306	junction_3	14.1656862405839	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCATTTTATTTACTTTT	2010	False	NA	NA	False	NA	NA	NA	49876355	49868946	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49870061_49871546_49871717_49871811_49871890_49872916
H1_mix_00046040	chr19	-	2038	5	FSM	ENSG00000204673.11	ENST00000391831.5	2025	5	0	-13	0	0	multi-exon	FALSE	canonical	2	3	junction_4	139.968746511498	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTGTGAGTGTTCATT	2116	False	NA	NA	False	ATTAAA	-28	NA	49876249	49869032	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49870061_49871546_49871717_49871811_49871890_49872916_49873303_49875873
H1_mix_00046041	chr19	-	2079	5	FSM	ENSG00000204673.11	ENST00000391832.7	1911	5	-76	-92	0	86	multi-exon	FALSE	canonical	3	29	junction_4	128.757524051995	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCATTTTATTTACTTTT	1010	False	49877386	NA	False	NA	NA	NA	49877355	49868946	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49870061_49871546_49871717_49871811_49871890_49872916_49873303_49877024
H1_mix_00046042	chr19	-	1781	5	FSM	ENSG00000204673.11	ENST00000344175.10	1775	5	0	-6	0	0	multi-exon	FALSE	canonical	3	27	junction_4	129.619635858152	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTGTGAGTGTTCATT	1010	False	49877386	NA	False	ATTAAA	-28	NA	49877355	49869032	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49870061_49871546_49871717_49871811_49871890_49872916_49873303_49877236
H1_mix_00046043	chr19	-	3201	5	FSM	ENSG00000204673.11	ENST00000391835.1	3075	5	-27	-99	-27	86	multi-exon	FALSE	canonical	3	147	junction_4	78.0464605219225	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCATTTTATTTACTTTT	310	False	NA	NA	False	NA	NA	NA	49878055	49868946	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49870061_49871546_49871717_49871811_49871890_49872916_49873303_49876602
H1_mix_00046044	chr19	-	2297	6	NNC	ENSG00000204673.11	novel	1849	5	NA	NA	162	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	152.973984716356	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTGTGAGTGTTCATT	171	False	NA	NA	False	ATTAAA	-28	NA	49878194	49869032	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_49870061_49871546_49871717_49871811_49871890_49872916_49873303_49877236_49877847_49878169
H1_mix_00046045	chr19	-	1935	5	FSM	ENSG00000204673.11	ENST00000391834.6	1849	5	0	-86	0	86	multi-exon	FALSE	canonical	3	10	junction_4	136.949580138093	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCATTTTATTTACTTTT	9	True	NA	NA	False	NA	NA	NA	49878356	49868946	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49870061_49871546_49871717_49871811_49871890_49872916_49873303_49878169
H1_mix_00046046	chr19	-	3479	2	FSM	ENSG00000213024.12	ENST00000422090.2	3479	2	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGCTGTTAATATGGAT	2854	False	NA	-1	True	AATAAA	-19	NA	49929744	49906824	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49909885_49929325
H1_mix_00046047	chr19	-	3361	3	FSM	ENSG00000213024.12	ENST00000352066.8	3361	3	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	21	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGCTGTTAATATGGAT	-17	True	NA	-1	True	AATAAA	-19	NA	49929504	49906824	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49909885_49927693_49927816_49929325
H1_mix_00046051	chr19	-	1817	15	FSM	ENSG00000105053.11	ENST00000599538.5	2126	15	577	-268	0	0	multi-exon	FALSE	canonical	3	150	junction_14	23.9804342014442	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTAATAAATTGTTTTAC	17	True	NA	-31	True	NA	NA	NA	50025369	49976491	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49976785_49979082_49979243_49980954_49981014_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50009235_50009386_50016023_50016164_50020584_50020648_50025345
H1_mix_00046052	chr19	-	1666	11	FSM	ENSG00000105053.11	ENST00000601912.5	1668	11	2	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	65.3107188752352	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATTAAAAGAGTTCAATGC	5462	False	NA	32	True	NA	NA	NA	50020647	49981653	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49982189_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50016023_50016164_50020584
H1_mix_00046053	chr19	-	1831	13	FSM	ENSG00000105053.11	ENST00000594092.5	1831	13	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	59.7849734929736	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTTTCCTCATCATCAAA	782	False	NA	-14	True	AATAAA	-19	NA	50025327	49981699	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49982189_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50009235_50009386_50016023_50016164_50020584_50020648_50025266
H1_mix_00046054	chr19	-	1642	12	NIC	ENSG00000105053.11	novel	1979	12	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	62.4835846211422	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGATCTTTCCTCATCA	14	True	NA	-19	True	AATAAA	-14	NA	50025372	49981704	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_49982189_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50016023_50016164_50020584_50020648_50025345
H1_mix_00046058	chr19	-	1380	5	FSM	ENSG00000142530.11	ENST00000600100.6	1375	5	0	-5	0	2	multi-exon	FALSE	canonical	3	31	junction_3	13.7658998979362	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCACGAGCGGTTTCGCC	-1	True	NA	NA	False	AATAAA	-27	NA	50476848	50466782	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_50466956_50467621_50467830_50475324_50475504_50475832_50475934_50476129
H1_mix_00046059	chr19	-	834	5	FSM	ENSG00000161677.12	ENST00000598418.6	834	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	9.41740410091868	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCCTGTGTCTGACG	-6	True	NA	-6	True	AATAAA	-18	NA	50511191	50505997	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_50506273_50506377_50506573_50507573_50507700_50510285_50510449_50511116
H1_mix_00046060	chr19	-	3314	3	FSM	ENSG00000131409.13	ENST00000652263.1	3348	3	34	0	34	0	multi-exon	FALSE	canonical	2	6	junction_2	4	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCACGGAGGAGAGAAAACAA	18	True	NA	-2	True	AGTAAA	-25	NA	50568401	50516891	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_50519416_50548541_50548874_50567943
H1_mix_00046061	chr19	-	3770	9	FSM	ENSG00000213023.11	ENST00000338916.8	2915	9	-855	0	406	0	multi-exon	FALSE	canonical	3	102	junction_3	29.8221289481486	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGCCTCCTGTCCTCTCT	962	False	NA	0	True	AATAAA	-25	NA	50638900	50621976	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_50622482_50622686_50622756_50625161_50625295_50625392_50625565_50625896_50626018_50629293_50629513_50629783_50630172_50632285_50632812_50637263
H1_mix_00046062	chr19	-	2526	11	FSM	ENSG00000213023.11	ENST00000600079.6	2526	11	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_3	33.2386822843506	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGCCTCCTGTCCTCTCT	-19	True	NA	0	True	AATAAA	-25	NA	50639881	50621976	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_50622482_50622686_50622756_50625161_50625295_50625392_50625565_50625896_50626018_50629293_50629513_50629783_50630172_50632285_50632812_50637263_50637427_50639024_50639163_50639789
H1_mix_00046063	chr19	-	2635	12	NNC	ENSG00000213023.11	novel	2526	11	NA	NA	4	74	at_least_one_novel_splicesite	TRUE	canonical	3	10	junction_10	66.8323423461356	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTCAATGACTGGGCA	39	False	NA	74	True	NA	NA	NA	50639823	50621902	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_50622482_50622686_50622756_50625161_50625295_50625392_50625565_50625896_50626018_50629293_50629513_50629783_50630172_50632285_50632812_50637263_50637427_50639024_50639163_50639306_50639400_50639789
H1_mix_00046071	chr19	-	1823	5	FSM	ENSG00000167759.13	ENST00000595793.6	1820	5	0	-3	0	3	multi-exon	FALSE	canonical	3	19	junction_2	6.64736790015417	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTGCATGGTTCCCATA	1	True	NA	1	True	AATAAA	-23	NA	51065092	51055622	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_51056776_51058537_51058675_51059824_51060094_51060432_51060620_51065015
H1_mix_00046072	chr19	-	1720	5	NNC	ENSG00000167759.13	novel	1614	6	NA	NA	20	-8	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	9.78199877325692	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCACTATTATTATTTGCA	743	False	NA	-10	True	AATAAA	-12	NA	51065047	51055633	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_51056776_51058537_51058675_51059744_51060094_51060559_51060620_51065015
H1_mix_00046077	chr19	-	2404	6	NNC	ENSG00000186806.6	novel	2297	7	NA	NA	415	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	35.466040094716	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCGGCTGGTTTCAGGCT	2863	False	NA	0	True	AATAAA	-19	NA	51339340	51331535	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_51332640_51333788_51333946_51334190_51334305_51337237_51337535_51337929_51338209_51338887
H1_mix_00046078	chr19	-	904	7	NNC	ENSG00000105379.10	novel	872	6	NA	NA	0	8459	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	272.377189451197	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTCCTAGCTCCTGG	18	True	NA	NA	False	NA	NA	NA	51366349	51336709	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_51336786_51345173_51345382_51346899_51347059_51350328_51350392_51353131_51353291_51354149_51354309_51366269
H1_mix_00046079	chr19	-	3398	5	FSM	ENSG00000105379.10	ENST00000354232.8	3551	5	153	0	153	0	multi-exon	FALSE	canonical	3	677	junction_1	38.0164438105407	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTTAACTTATTTCCT	9414	False	NA	-14	True	AATAAA	-19	NA	51356953	51345168	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_51345382_51346899_51347059_51350328_51350392_51353131_51353291_51354149
H1_mix_00046080	chr19	-	872	6	FSM	ENSG00000105379.10	ENST00000309244.9	872	6	0	0	0	0	multi-exon	FALSE	canonical	3	677	junction_1	34.3685903115039	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTTAACTTATTTCCT	-21	True	NA	-14	True	AATAAA	-19	NA	51366388	51345168	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_51345382_51346899_51347059_51350328_51350392_51353131_51353291_51354149_51354309_51366269
H1_mix_00046081	chr19	-	551	4	FSM	ENSG00000269403.1	ENST00000600067.1	551	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	340.636985008316	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAGACAGGGCAGATGACA	4848	False	NA	NA	False	NA	NA	NA	51368099	51350372	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_51350392_51353131_51353291_51354149_51354309_51367885
H1_mix_00046083	chr19	-	947	8	NNC	ENSG00000161551.15	novel	1865	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	25.6610560172096	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGTGGTTCCATTCTTT	-22	True	NA	-3	True	NA	NA	NA	51887951	51855803	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_51855968_51860903_51860979_51877281_51877378_51878388_51878516_51880322_51880402_51880678_51880878_51886820_51886913_51887836
H1_mix_00046084	chr19	-	1886	7	FSM	ENSG00000161551.15	ENST00000640955.1	1865	7	0	-21	0	13	multi-exon	FALSE	canonical	3	37	junction_6	16.6299595776886	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGTCCTAACTCATTCT	-22	True	NA	12	True	NA	NA	NA	51887951	51855788	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_51855968_51860903_51860979_51877281_51877378_51878388_51878516_51880322_51880402_51880678_51880878_51886820
H1_mix_00046086	chr19	-	8291	6	FSM	ENSG00000161551.15	ENST00000638348.2	8291	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	25.168233946783	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAAGTTGTTTCTGATTCT	-22	True	NA	NA	False	AATAAA	-22	NA	51887951	51867047	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_51873707_51877281_51877378_51878388_51878516_51880322_51880402_51880678_51880878_51886820
H1_mix_00046088	chr19	-	6005	8	Fusion	ENSG00000161551.15_ENSG00000198093.11	novel	2283	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	37	junction_3	87.2577696675026	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGACAGCATTGCCGTC	3	True	NA	NA	False	NA	NA	NA	51905011	51878388	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_-_51878516_51880322_51880402_51880678_51880878_51886820_51891898_51896471_51896568_51896851_51896979_51900092_51900295_51904913
H1_mix_00046092	chr19	-	2374	5	FSM	ENSG00000256683.7	ENST00000243644.9	2355	5	0	-19	0	19	multi-exon	FALSE	canonical	3	39	junction_1	7.91754381105656	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCCAGGAGCTGAGGTCA	-15	True	NA	18	True	ATTAAA	-37	NA	51986840	51964320	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_51966215_51968577_51968674_51969004_51969132_51974345_51974532_51986769
H1_mix_00046093	chr19	-	1601	2	FSM	ENSG00000256683.7	ENST00000597555.1	1601	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	20	True	NA	NA	False	NA	NA	NA	51986805	51972966	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_51974532_51986769
H1_mix_00046094	chr19	-	4029	6	FSM	ENSG00000197619.15	ENST00000594083.5	4020	6	0	-9	0	7	multi-exon	FALSE	canonical	3	20	junction_5	6.04648658313239	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGCACAATTTTTTACT	14	True	NA	4	True	AATAAA	-33	NA	52008196	51991324	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_51994838_52000345_52000379_52001812_52001909_52002154_52002282_52003696_52003901_52008140
H1_mix_00046095	chr19	-	4119	7	FSM	ENSG00000197619.15	ENST00000598071.6	4075	7	4	-48	4	48	multi-exon	FALSE	canonical	3	15	junction_5	8.14452781524708	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATGATTCATGGGTCATA	3	True	NA	45	True	NA	NA	NA	52008207	51991283	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_51994838_52000345_52000379_52001812_52001909_52002154_52002282_52003696_52003901_52007292_52007331_52008140
H1_mix_00046096	chr19	-	4129	6	FSM	ENSG00000197619.15	ENST00000599177.5	4122	6	0	-7	0	1	multi-exon	FALSE	canonical	1	1	junction_1	13.1848397790796	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTGTGAGCACAATTT	-5	True	NA	-2	True	AATAAA	-27	NA	52008215	51991330	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_51994838_52000258_52000379_52001812_52001909_52002154_52002282_52003696_52003901_52008140
H1_mix_00046098	chr19	-	4724	6	FSM	ENSG00000142556.19	ENST00000595189.5	1031	6	-12	-3681	0	4	multi-exon	FALSE	canonical	0	0	junction_1	75.2	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTTTTGCTTTTGCTTTT	40	True	NA	-1	True	AATAAA	-21	NA	52028349	52013319	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52017360_52017575_52017698_52018007_52018104_52018367_52018495_52025730_52025962_52028241
H1_mix_00046099	chr19	-	4633	5	FSM	ENSG00000142556.19	ENST00000270649.11	4628	5	0	-5	0	5	multi-exon	FALSE	canonical	3	127	junction_1	18.3762754659371	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTTTGCTTTTGCTTTTT	10	True	NA	0	True	AATAAA	-22	NA	52028379	52013318	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52017360_52018007_52018104_52018367_52018495_52025730_52025962_52028241
H1_mix_00046101	chr19	-	3820	6	FSM	ENSG00000197608.12	ENST00000594295.5	3819	6	0	-1	0	0	multi-exon	FALSE	canonical	3	26	junction_3	1.46969384566991	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGCCTCAGGTATTTCTG	1634	False	NA	0	True	ATTAAA	-16	NA	52094105	52064464	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52067611_52076043_52076173_52076957_52077085_52084786_52084879_52088936_52089003_52093845
H1_mix_00046102	chr19	-	3874	7	FSM	ENSG00000197608.12	ENST00000594440.6	3877	7	3	0	3	0	multi-exon	FALSE	canonical	3	15	junction_6	4.7404875511093	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGCCTCAGGTATTTCTG	-23	True	NA	0	True	ATTAAA	-16	NA	52095762	52064464	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52067611_52076043_52076173_52076957_52077085_52084786_52084879_52088936_52089003_52093845_52093972_52095574
H1_mix_00046103	chr19	-	3618	5	FSM	ENSG00000197608.12	ENST00000426391.6	3620	5	3	-1	3	0	multi-exon	FALSE	canonical	1	1	junction_1	11.247221879202	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGCCTCAGGTATTTCTG	-23	True	NA	0	True	ATTAAA	-16	NA	52095762	52064464	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52067611_52084786_52084879_52088936_52089003_52093845_52093972_52095574
H1_mix_00046105	chr19	-	4356	4	FSM	ENSG00000204611.7	ENST00000600228.6	4356	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	4.10960933531265	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGGTTTCTGTTTTTTT	-7	True	NA	-21	True	ATTAAA	-1	NA	52139938	52113090	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52117025_52123922_52124050_52130500_52130589_52139731
H1_mix_00046106	chr19	-	598	4	FSM	ENSG00000204611.7	ENST00000597013.5	577	4	0	-21	0	21	multi-exon	FALSE	canonical	3	14	junction_1	22.6862660362314	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAAAGTGCTGGGATTAC	27	False	NA	NA	False	NA	NA	NA	52139904	52122247	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52122458_52123922_52124050_52130500_52130589_52139731
H1_mix_00046108	chr19	-	3736	6	NNC	ENSG00000196267.14	novel	4076	5	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.1973681932103	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCTCGGATAGTTCTT	128	False	NA	NA	False	ATTAAA	-16	NA	52171533	52153863	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_52154132_52154626_52157541_52160464_52160592_52168057_52168153_52169647_52169782_52171335
H1_mix_00046109	chr19	-	806	4	FSM	ENSG00000196267.14	ENST00000597065.1	808	4	0	2	0	-2	multi-exon	FALSE	canonical	3	29	junction_1	5.18544972870135	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGGCCTTTCATTTCCC	18	False	NA	-1	True	AATAAA	-17	NA	52171643	52160322	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52160592_52168057_52168153_52169647_52169782_52171335
H1_mix_00046110	chr19	-	3766	2	FSM	ENSG00000167766.20	ENST00000541777.6	3743	2	0	-23	0	22	multi-exon	FALSE	canonical	3	66	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAAGATGCATCCTCAGGG	NA	False	NA	2	True	AATAAA	-38	NA	52618040	52612354	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52614798_52616717
H1_mix_00046111	chr19	-	3539	2	FSM	ENSG00000167766.20	ENST00000597597.1	4442	2	913	-10	913	10	multi-exon	FALSE	canonical	3	11	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGTTACTAATCTAAGAT	2178	False	NA	-10	True	AATAAA	-26	NA	52636173	52612366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52614798_52635065
H1_mix_00046113	chr19	-	2913	6	FSM	ENSG00000167766.20	ENST00000594682.6	2890	6	0	-23	0	22	multi-exon	FALSE	canonical	3	18	junction_3	26.431799030713	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAAGATGCATCCTCAGGG	8	True	NA	2	True	AATAAA	-38	NA	52690488	52612354	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52614798_52618935_52619063_52635065_52635154_52655560_52655688_52660761_52660844_52690442
H1_mix_00046119	chr19	-	8489	5	Fusion	ENSG00000288953.1_ENSG00000213020.10	novel	4796	9	NA	NA	-7557	416	multi-exon	FALSE	canonical	2	7	junction_4	14.3592304807744	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAAGGGCTCACACCCAG	NA	False	NA	NA	False	NA	NA	NA	52716388	52698936	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_-_52706865_52707468_52707543_52714014_52714142_52715831_52715914_52716110
H1_mix_00046120	chr19	-	7940	6	FSM	ENSG00000288953.1_ENSG00000213020.10	ENST00000652185.1	4507	6	29	-3462	0	2	multi-exon	FALSE	canonical	3	9	junction_5	12.280065146407	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTTGGTGGCCTCTTCCC	18	True	NA	-3	True	AATAAA	-24	NA	52735015	52699350	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52706865_52714014_52714142_52715831_52715914_52728729_52728832_52729905_52730006_52735000
H1_mix_00046124	chr19	-	3645	4	FSM	ENSG00000189190.11	ENST00000648973.1	3645	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	3.77123616632825	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAATCTGTCTCAAAAAAAA	23	False	NA	NA	False	NA	NA	NA	52786807	52764549	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52767773_52774574_52774702_52778825_52778908_52786594
H1_mix_00046129	chr19	-	4558	4	FSM	ENSG00000198538.11	ENST00000457749.7	4558	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	59.4661434954565	220	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATGAGTTCGATTTCT	-1	False	NA	-8	True	AATAAA	-22	NA	52821633	52797407	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52801703_52808006_52808134_52817943_52818032_52821585
H1_mix_00046135	chr19	-	4405	4	FSM	ENSG00000204604.13	ENST00000595646.6	4405	4	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	33.95094500403	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCTGAACAGGGTCTAG	-1	True	NA	NA	False	AATAAA	-21	NA	52857619	52838009	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52842152_52849086_52849214_52854257_52854346_52857571
H1_mix_00046136	chr19	-	4027	5	FSM	ENSG00000204604.13	ENST00000243639.8	4027	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	60.3339663871024	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATTTGGATGAGTTTGAT	NA	False	NA	-10	True	AATAAA	-18	NA	52857649	52838535	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52842152_52845178_52845297_52849086_52849214_52854257_52854346_52857571
H1_mix_00046138	chr19	-	3880	6	FSM	ENSG00000182986.15	ENST00000673631.1	3897	6	3	14	3	-14	multi-exon	FALSE	canonical	3	10	junction_2	26.9918506219933	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTAGAATGACAAAGTTTT	-36	True	NA	NA	False	NA	NA	NA	52897690	52860864	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52864160_52873991_52874073_52888126_52888254_52890240_52890329_52891228_52891347_52897519
H1_mix_00046139	chr19	-	6211	6	NIC	ENSG00000182986.15	novel	6331	6	NA	NA	-3	-4	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	28.9454659661924	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGCCTATTATTCCATCT	-35	True	NA	-12	True	ATTAAA	-11	NA	52897689	52876183	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_52881942_52888126_52888254_52890240_52890329_52891228_52891347_52893778_52893857_52897647
H1_mix_00046142	chr19	-	713	5	ISM	ENSG00000182986.15	ENST00000682928.1	6331	6	-47	11808	2	204	5prime_fragment	FALSE	canonical	2	9	junction_4	27.8836869871974	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTGGACTTTCACTGTC	-28	True	NA	NA	False	ACTAAA	-44	NA	52897682	52887987	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_52888254_52890240_52890329_52891228_52891347_52893778_52893857_52897519
H1_mix_00046143	chr19	-	4231	4	NIC	ENSG00000213793.6	novel	562	5	NA	NA	-103	-5	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	12.9185482500507	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAACTCAGTGTCTGAGAG	NA	False	NA	-6	True	AATAAA	-12	NA	52923573	52904419	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_52908180_52915195_52915323_52917858_52917998_52923368
H1_mix_00046144	chr19	-	4165	4	NIC	ENSG00000213793.6	novel	4144	5	NA	NA	-103	-5	combination_of_known_splicesites	FALSE	canonical	3	11	junction_3	12.0277457017791	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAACTCAGTGTCTGAGAG	NA	False	NA	-6	True	AATAAA	-12	NA	52923573	52904419	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_52908180_52915195_52915323_52917858_52917932_52923368
H1_mix_00046145	chr19	-	2362	2	FSM	ENSG00000213801.4	ENST00000313956.4	2341	2	0	-21	0	21	multi-exon	FALSE	canonical	3	50	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGCTATATAATTCAGT	-15	True	NA	NA	False	NA	NA	NA	52942601	52927113	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52929415_52942540
H1_mix_00046146	chr19	-	2995	4	FSM	ENSG00000180257.14	ENST00000438970.6	491	4	0	-2504	0	132	multi-exon	FALSE	canonical	1	3	junction_1	22.86676384819	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTTTGGGAGGCCAAGG	-2	True	NA	NA	False	NA	NA	NA	52962871	52949246	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52951892_52952750_52952878_52956026_52956105_52962726
H1_mix_00046147	chr19	-	2569	4	FSM	ENSG00000180257.14	ENST00000444460.7	2560	4	0	-9	0	3	multi-exon	FALSE	canonical	3	32	junction_3	11.7284080571728	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTAGAGTTGATTCAACA	-12	True	NA	-16	True	AATAAA	-32	NA	52962881	52949375	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52951585_52952750_52952878_52956026_52956105_52962726
H1_mix_00046149	chr19	-	4824	4	FSM	ENSG00000242779.7	ENST00000270443.8	2990	4	-7	-1827	0	472	multi-exon	FALSE	canonical	3	26	junction_3	10.2306728354819	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTCAAATGATGTAATTC	-1	True	NA	-15	True	AATAAA	-26	NA	52993531	52966423	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52970843_52980891_52980973_52986574_52986847_52993479
H1_mix_00046150	chr19	-	599	5	FSM	ENSG00000242779.7	ENST00000599665.5	599	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	18.9126280564072	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGACAAGCAAGTCATCAC	4	True	NA	NA	False	AATACA	-26	NA	52993526	52970761	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52970843_52980891_52980973_52986574_52986847_52990092_52990211_52993479
H1_mix_00046151	chr19	-	469	4	FSM	ENSG00000242779.7	ENST00000602242.5	566	4	0	97	0	10	multi-exon	FALSE	canonical	0	0	junction_1	15.5134350376268	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCAGTGCCGAGGCATCT	-1	True	NA	NA	False	ACTAAA	-36	NA	52993531	52978889	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52978954_52980891_52980973_52986574_52986847_52993479
H1_mix_00046153	chr19	-	6048	8	NNC	ENSG00000170949.18	novel	4336	7	NA	NA	0	1724	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_4	58.7530285802097	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTAGTCTATTTCCTTA	33	False	NA	0	True	AATAAA	-19	NA	53103378	53064881	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_53070263_53074139_53074269_53075056_53075184_53085162_53085219_53086012_53086110_53086261_53086322_53091636_53091721_53103264
H1_mix_00046154	chr19	-	6192	9	NNC	ENSG00000170949.18	novel	4336	7	NA	NA	-2	1724	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_4	53.5274462308823	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTAGTCTATTTCCTTA	6	True	NA	0	True	AATAAA	-19	NA	53103405	53064881	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_53070263_53074139_53074269_53075056_53075184_53085162_53085219_53086012_53086110_53086261_53086322_53091412_53091530_53091636_53091721_53103264
H1_mix_00046157	chr19	-	5859	4	FSM	ENSG00000170949.18	ENST00000601982.5	668	4	0	-5191	0	1724	multi-exon	FALSE	canonical	3	122	junction_3	22.939534045447	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTAGTCTATTTCCTTA	NA	False	NA	0	True	AATAAA	-19	NA	53085384	53064881	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_53070263_53074139_53074269_53075056_53075184_53085162
H1_mix_00046158	chr19	-	1283	7	FSM	ENSG00000170949.18	ENST00000355147.9	1304	7	0	21	0	-21	multi-exon	FALSE	canonical	0	0	junction_1	66.5507325278993	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTTTCTCTTAAGACAAA	8	True	NA	NA	False	AATAAA	-5	NA	53103403	53072906	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_53073510_53074139_53074269_53075056_53075184_53086261_53086322_53091412_53091554_53091636_53091721_53103264
H1_mix_00046159	chr19	-	1728	4	FSM	ENSG00000170949.18	ENST00000597112.5	1728	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	48.3068893177314	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCCACCCTGGCTGCCTG	-12	True	NA	NA	False	NA	NA	NA	53103423	53084953	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_53086322_53091412_53091530_53091636_53091721_53103264
H1_mix_00046163	chr19	-	2146	2	NIC	ENSG00000170954.12	novel	560	3	NA	NA	0	85	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTCAACCAAAACCTTGAAA	12	True	NA	84	True	NA	NA	NA	53132886	53107793	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_53109909_53132855
H1_mix_00046164	chr19	-	580	5	FSM	ENSG00000170954.12	ENST00000595813.5	580	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	5.62916512459885	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGAAGAGTTTTGCTTCA	-2	True	NA	NA	False	AAAACA	-4	NA	53132900	53109805	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_53109909_53115209_53115308_53116312_53116434_53122403_53122617_53132855
H1_mix_00046165	chr19	-	7992	5	FSM	ENSG00000197937.13	ENST00000334197.12	7984	5	15	-23	9	23	multi-exon	FALSE	canonical	3	15	junction_4	8.8423695919137	1492	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTGCGTATGCATCTTAC	16	False	NA	1	True	ATTAAA	-44	NA	53159038	53134911	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_53142557_53148680_53148810_53149240_53149368_53153732_53153794_53159008
H1_mix_00046166	chr19	-	1065	1	FSM	ENSG00000267809.1	ENST00000596415.1	907	1	-89	-69	-89	69	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAACAAAACCCAAGGCAA	NA	False	NA	NA	False	AATAAA	-30	NA	53224968	53223903	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_53223900_53225000
H1_mix_00046168	chr19	-	622	5	FSM	ENSG00000197928.11	ENST00000594517.5	622	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	54.5091735398731	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAGTGTTTCTATAAGAG	237	False	NA	-2	True	AATAAA	-24	NA	53254688	53238289	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_53238558_53243743_53243898_53251535_53251606_53253085_53253157_53254629
H1_mix_00046169	chr19	-	3208	1	FSM	ENSG00000197928.11	ENST00000599328.1	3207	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATGGAAAGCCTGTGGT	NA	False	NA	-1	True	AATAAA	-21	NA	53241803	53238595	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_53238600_53241800
H1_mix_00046170	chr19	-	5660	4	FSM	ENSG00000197928.11	ENST00000601413.5	706	4	6	-4960	6	1	multi-exon	FALSE	canonical	3	34	junction_3	40.4722126896961	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATGGAAAGCCTGTGGT	5	True	NA	-1	True	AATAAA	-21	NA	53254815	53238595	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_53243898_53251535_53251606_53253085_53253157_53254598
H1_mix_00046177	chr19	-	1476	1	FSM	ENSG00000229000.1	ENST00000413308.1	775	1	313	-1014	313	1014	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	AATAAA	-19	NA	53772967	53771491	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_53771500_53773000
H1_mix_00046178	chr19	-	3459	10	FSM	ENSG00000142405.22	ENST00000324134.11	3634	10	175	0	175	0	multi-exon	TRUE	canonical	1	1	junction_8	2.77999911182151	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGCGGGCACCTGTAGT	173	False	NA	1	True	AATAAA	-18	NA	53824139	53793740	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_53794137_53795858_53796030_53798242_53798414_53801226_53801398_53803951_53804123_53805279_53805451_53807494_53807666_53809586_53811289_53814907_53814989_53823885
H1_mix_00046179	chr19	-	774	6	FSM	ENSG00000105619.14	ENST00000391757.1	774	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	69.7492652291048	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGCCACCGTCTACTTG	1	True	NA	-7	True	AATAAA	-16	NA	54115288	54107019	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_54107170_54108025_54108208_54108325_54108396_54110050_54110122_54114441_54114701_54115246
H1_mix_00046180	chr19	-	1180	6	FSM	ENSG00000105619.14	ENST00000391759.6	1180	6	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_4	9.49947366963033	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGCCACCGTCTACTTG	-11	True	NA	-7	True	AATAAA	-16	NA	54115657	54107019	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_54107170_54108025_54108245_54108325_54108396_54110050_54110122_54114441_54114701_54115246
H1_mix_00046182	chr19	-	519	3	FSM	ENSG00000167608.12	ENST00000615945.4	506	3	0	-13	0	13	multi-exon	FALSE	canonical	2	5	junction_2	18.5	635	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCGTCCTGAAGGTGGGG	1314	False	NA	0	True	AATAAA	-32	NA	54160972	54160094	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_54160375_54160466_54160611_54160877
H1_mix_00046185	chr19	-	2294	8	FSM	ENSG00000125505.17	ENST00000245615.6	2294	8	0	0	0	0	multi-exon	TRUE	canonical	3	439	junction_2	96.3164427439944	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCGTGTCCGTGCAGGTA	15	True	NA	-5	True	AATAAA	-14	NA	54189580	54173414	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_54174432_54178764_54178942_54180772_54181134_54183520_54183681_54187160_54187288_54188216_54188347_54188432_54188512_54189337
H1_mix_00046186	chr19	-	1797	7	FSM	ENSG00000125505.17	ENST00000391754.5	1797	7	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_1	95.2267761130707	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGGCCTGACAGGTAAG	7	True	NA	-43	True	GATAAA	-18	NA	54189672	54178336	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_54178942_54180772_54181134_54183520_54183681_54187160_54187288_54188216_54188347_54188432_54188512_54189337
H1_mix_00046187	chr19	-	1585	2	FSM	ENSG00000125505.17	ENST00000495279.2	1585	2	0	0	0	0	multi-exon	FALSE	canonical	3	680	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTCTAAATCTGCTCGG	6045	False	NA	-15	True	AGTAAA	-19	NA	54183634	54179662	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_54181134_54183520
H1_mix_00046188	chr19	-	3437	6	FSM	ENSG00000125505.17	ENST00000414665.5	876	6	-39	-2522	10	0	multi-exon	FALSE	canonical	3	17	junction_5	262.966461739896	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGGCCTGACAGGTAAG	345	False	NA	-43	True	GATAAA	-18	NA	54189334	54178336	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_54181134_54183520_54183681_54187160_54187288_54188216_54188347_54188432_54188512_54189190
H1_mix_00046190	chr19	-	2050	1	FSM	ENSG00000275183.2	ENST00000611161.2	2047	1	-3	0	-3	0	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACGTGAGCTGGTGATC	-5	True	NA	-4	True	AATAAA	-28	NA	54463781	54461731	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_54461700_54463800
H1_mix_00046191	chr19	-	877	3	FSM	ENSG00000167617.3	ENST00000301200.3	896	3	19	0	19	0	multi-exon	FALSE	canonical	2	8	junction_2	5.5	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGACTTTTCACTTTGC	-16	True	NA	-14	True	CATAAA	-21	NA	54473277	54465025	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_54465548_54471544_54471686_54473063
H1_mix_00046194	chr19	-	2770	22	NIC	ENSG00000125503.13	novel	2997	22	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	64	junction_13	36.945139202033	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGCTCTGTGTTCCCAG	223	False	NA	-5	True	AATAAA	-17	NA	55117413	55090917	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_55091559_55091649_55091701_55091858_55091910_55092221_55092327_55092441_55092545_55092621_55092663_55092782_55092866_55093015_55093077_55093152_55093234_55094344_55094436_55094660_55094799_55095290_55095359_55095444_55095604_55095866_55095941_55096050_55096179_55096261_55096336_55098783_55098859_55098950_55099096_55103408_55103569_55112466_55112586_55112664_55112796_55117222
H1_mix_00046196	chr19	-	2997	22	FSM	ENSG00000125503.13	ENST00000263433.8	2997	22	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_7	41.4827232294435	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGCTCTGTGTTCCCAG	-1	True	NA	-5	True	AATAAA	-17	NA	55117637	55090917	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55091559_55091649_55091701_55091858_55091910_55092221_55092327_55092441_55092545_55092621_55092663_55092782_55092869_55093015_55093077_55093152_55093234_55094344_55094436_55094660_55094799_55095290_55095359_55095444_55095604_55095866_55095941_55096050_55096179_55096261_55096336_55098783_55098859_55098950_55099096_55103408_55103569_55112466_55112586_55112664_55112796_55117222
H1_mix_00046199	chr19	-	1065	11	FSM	ENSG00000105048.18	ENST00000587465.6	1065	11	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_10	315.128608666367	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACCCGCTGGGTTCTCTG	2	True	NA	-43	True	AATAAA	-12	NA	55146949	55132834	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55141921_55145543_55145566_55146433_55146467_55146680
H1_mix_00046200	chr19	-	995	10	FSM	ENSG00000105048.18	ENST00000585321.6	995	10	0	0	0	0	multi-exon	FALSE	canonical	3	679	junction_9	189.967118662256	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCGGTAGCTTGAAATAAAC	9	True	NA	-73	True	NA	NA	NA	55146942	55132864	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55141921_55145543_55145566_55146680
H1_mix_00046202	chr19	-	800	10	FSM	ENSG00000105048.18	ENST00000593046.5	800	10	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_8	412.039851842237	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGGTGCTGTGGGGGGCTC	9783	False	NA	NA	False	NA	NA	NA	55147346	55137102	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55141921_55145543_55145566_55146433_55146467_55146680_55146708_55147007_55147022_55147125
H1_mix_00046205	chr19	-	744	5	FSM	ENSG00000129991.13	ENST00000588882.1	669	5	-70	-5	-3	1	multi-exon	FALSE	canonical	3	104	junction_4	101.75061424876	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCCATGTCTATTACCC	-5	True	NA	-1	True	AATAAA	-21	NA	55156795	55151765	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55151918_55154029_55154207_55154740_55154831_55156200_55156333_55156602
H1_mix_00046206	chr19	-	2180	12	FSM	ENSG00000167646.14	ENST00000391720.8	2169	12	0	-11	0	9	multi-exon	FALSE	canonical	3	17	junction_11	12.1383212585269	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCGTCTTTCCTGTCCTAT	-7	True	NA	9	True	AGTAAA	-30	NA	55166651	55158651	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55159450_55159532_55159608_55159898_55160014_55160639_55160776_55161064_55161188_55161292_55161419_55161642_55161826_55162132_55162291_55165369_55165464_55165857_55166001_55166328_55166418_55166511
H1_mix_00046210	chr19	-	1509	2	FSM	ENSG00000180089.6	ENST00000589190.1	1508	2	0	-1	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGAGGACTGTTTGGTC	-6	True	NA	-3	True	GATAAA	-22	NA	55228773	55226637	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55227564_55228190
H1_mix_00046211	chr19	-	3061	1	FSM	ENSG00000276570.1	ENST00000586923.1	3061	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGCCCTCAGGAGCCCG	1576	False	NA	NA	False	NA	NA	NA	55230279	55227218	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55227200_55230300
H1_mix_00046212	chr19	-	3984	24	FSM	ENSG00000105063.19	ENST00000412770.7	3984	24	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_23	49.1358981187069	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCTGGTCAGACCTTAC	-21	True	NA	-17	True	AATAAA	-17	NA	55259017	55229778	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55230532_55230612_55230685_55230773_55230885_55231409_55231492_55231597_55231669_55231801_55231983_55232074_55232212_55236642_55236822_55236912_55236971_55239404_55239503_55239593_55239684_55239825_55239912_55239998_55240115_55240235_55240301_55240944_55241080_55241238_55241392_55241476_55241640_55242165_55242280_55242375_55242489_55245119_55245186_55245264_55245403_55245491_55245679_55246876_55247110_55258434
H1_mix_00046214	chr19	-	1642	8	FSM	ENSG00000133265.11	ENST00000433386.7	1635	8	0	-7	0	7	multi-exon	TRUE	canonical	3	523	junction_7	66.385700451903	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTCATTTACTCTTCC	-9	True	NA	-8	True	AATAAA	-29	NA	55280110	55262215	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55262683_55265277_55265390_55265885_55265983_55266130_55266287_55274397_55274623_55277641_55277847_55279398_55279703_55280034
H1_mix_00046215	chr19	-	1783	9	FSM	ENSG00000133265.11	ENST00000255631.9	1768	9	0	-15	0	7	multi-exon	FALSE	canonical	3	23	junction_8	215.916324938621	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTCATTTACTCTTCC	7420	False	NA	-8	True	AATAAA	-29	NA	55280360	55262215	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55262683_55265277_55265390_55265885_55265983_55266130_55266287_55274397_55274623_55277641_55277847_55279398_55279703_55280034_55280109_55280217
H1_mix_00046217	chr19	-	1687	8	NIC	ENSG00000133265.11	novel	1635	8	NA	NA	18	-2	combination_of_known_junctions	FALSE	canonical	3	73	junction_7	212.864141783305	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGAGCCATTGTGTCATT	7721	False	NA	-17	True	AATAAA	-20	NA	55280059	55262224	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_55262683_55265277_55265390_55265885_55265983_55266130_55266287_55274397_55274623_55277641_55277847_55279398_55279703_55279929
H1_mix_00046218	chr19	-	536	2	FSM	ENSG00000133265.11	ENST00000587551.1	536	2	0	0	0	0	multi-exon	FALSE	canonical	3	523	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGGGGCTCGGGCAATT	7399	False	NA	NA	False	NA	NA	NA	55280381	55279513	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55279703_55280034
H1_mix_00046219	chr19	-	1566	5	FSM	ENSG00000160471.13	ENST00000326529.9	1566	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	10.1242283656583	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCAGAAGGTTCCTGGA	-5	True	NA	-14	True	TATAAA	-38	NA	55354719	55349703	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55350801_55353606_55353775_55353865_55353967_55354409_55354540_55354649
H1_mix_00046220	chr19	-	494	2	FSM	ENSG00000160471.13	ENST00000587357.1	494	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGAGGGGCGGGACGGA	3	True	NA	NA	False	NA	NA	NA	55354711	55354107	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55354540_55354649
H1_mix_00046222	chr19	-	275	1	FSM	ENSG00000269275.1	ENST00000595064.1	547	1	-57	329	-57	-329	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTATCCCAGGCCCACTCG	9856	False	NA	NA	False	NA	NA	NA	55378182	55377907	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55377900_55378200
H1_mix_00046223	chr19	-	703	2	FSM	ENSG00000233493.4	ENST00000444469.4	695	2	0	-8	0	8	multi-exon	FALSE	canonical	3	81	junction_1	0	168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCTGGGAGAGGGAC	-10	True	NA	6	True	GATAAA	-25	NA	55384292	55379235	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55379368_55383721
H1_mix_00046226	chr19	-	1133	6	FSM	ENSG00000063241.8	ENST00000085068.7	1122	6	0	-11	0	7	multi-exon	FALSE	canonical	3	8	junction_3	106.248011746103	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTCTTGGGTTGGGGGGG	-13	True	NA	-2	True	AATAAA	-24	NA	55461645	55452977	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55453389_55454988_55455107_55455259_55455379_55455635_55455846_55456348_55456490_55461511
H1_mix_00046227	chr19	-	1573	5	FSM	ENSG00000063241.8	ENST00000438389.6	1566	5	0	-7	0	7	multi-exon	FALSE	canonical	3	107	junction_3	75.6224173112709	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTCTTGGGTTGGGGGGG	2403	False	NA	-2	True	AATAAA	-24	NA	55462343	55452977	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55453389_55454988_55455107_55455259_55455331_55456348_55456490_55461511
H1_mix_00046229	chr19	-	2280	5	NNC	ENSG00000187550.9	novel	2251	4	NA	NA	0	22230	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	13.3299474867683	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATCCAAATTCCACA	6	True	NA	NA	False	NA	NA	NA	55537133	55506380	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_55506412_55528612_55530324_55531142_55531346_55536041_55536297_55537053
H1_mix_00046234	chr19	-	1992	2	FSM	ENSG00000179922.6	ENST00000325351.5	1987	2	0	-5	0	5	multi-exon	FALSE	canonical	3	43	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCGGTCTTGTATTCGGAT	0	True	NA	-12	True	ATTAAA	-22	NA	55624566	55620735	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55622645_55624483
H1_mix_00046242	chr19	-	2830	5	FSM	ENSG00000018869.18	ENST00000301310.8	2824	5	0	-6	0	5	multi-exon	FALSE	canonical	3	12	junction_4	16.5378354085412	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGGATATTTTGTAAATT	10	True	NA	5	True	AATAAA	-23	NA	56393520	56382745	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_56385185_56390000_56390097_56390374_56390502_56391743_56391833_56393441
H1_mix_00046243	chr19	-	3163	5	FSM	ENSG00000018869.18	ENST00000586929.6	3061	5	-102	0	-98	0	multi-exon	FALSE	canonical	3	24	junction_4	12.5099960031968	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAGTTGGATATTTTGT	NA	False	NA	0	True	AATAAA	-18	NA	56393636	56382750	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_56385185_56390000_56390097_56390374_56390502_56391743_56391833_56393219
H1_mix_00046245	chr19	-	3308	2	FSM	ENSG00000127903.14	ENST00000537055.4	3448	2	25	115	25	-115	multi-exon	FALSE	canonical	2	3	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCACAGGAAGAGCCTTCC	29	False	NA	NA	False	NA	NA	NA	56671732	56662094	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_56665246_56671575
H1_mix_00046246	chr19	-	1387	1	FSM	ENSG00000279541.1	ENST00000623072.1	1387	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCTCCATCCTACAGAAAA	NA	False	NA	NA	False	NA	NA	NA	57294469	57293082	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_57293100_57294500
H1_mix_00046250	chr19	-	5290	4	FSM	ENSG00000197128.13	ENST00000356584.8	5292	4	2	0	2	0	multi-exon	FALSE	canonical	2	11	junction_2	19.5675468285856	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATGTGTTGACCACTTT	-23	True	NA	-4	True	AATAAA	-21	NA	57477564	57469585	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_57474422_57475659_57475787_57476633_57476673_57477276
H1_mix_00046251	chr19	-	3376	5	FSM	ENSG00000251369.9	ENST00000457177.5	3376	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	14.5086181285469	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGACTTGTTAGGATTT	-12	True	NA	0	True	ATTAAA	-21	NA	57559863	57541835	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_57543244_57546456_57547994_57552626_57552723_57556230_57556358_57559655
H1_mix_00046254	chr19	-	564	2	FSM	ENSG00000251369.9	ENST00000595560.1	565	2	1	0	1	0	multi-exon	FALSE	canonical	3	63	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAGCTGATTGGCCATC	-8	True	NA	NA	False	NA	NA	NA	57559859	57555997	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_57556358_57559655
H1_mix_00046255	chr19	-	2545	4	FSM	ENSG00000083817.9	ENST00000196489.4	2545	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	9.89949493661167	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTCTTAGGGTTTGG	-15	True	NA	0	True	AATAAA	-20	NA	57578911	57571565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_57573702_57575803_57575931_57578056_57578099_57578671
H1_mix_00046256	chr19	-	6889	3	FSM	ENSG00000179909.16	ENST00000684351.1	6907	3	18	0	8	0	multi-exon	FALSE	canonical	3	26	junction_2	11	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGATGGAATTTTTGGAA	-4	True	NA	NA	False	GGGGCT	-31	NA	57709186	57696274	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_57702789_57704852_57704980_57708938
H1_mix_00046257	chr19	-	5687	4	FSM	ENSG00000179909.16	ENST00000512439.6	5687	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	10.6144555520604	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTGGCTTATTGAATCT	14	True	NA	-2	True	NA	NA	NA	57709168	57697366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_57701146_57701237_57702789_57704852_57704980_57708938
H1_mix_00046258	chr19	-	2567	5	FSM	ENSG00000179909.16	ENST00000451275.1	2567	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	11.5108644332213	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTGGCTTATTGAATCT	-12	True	NA	-2	True	NA	NA	NA	57709194	57697366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_57697842_57700987_57701146_57701237_57702789_57704852_57704980_57708938
H1_mix_00046259	chr19	-	2907	4	FSM	ENSG00000083814.13	ENST00000600125.5	2903	4	0	-4	0	4	multi-exon	FALSE	canonical	0	0	junction_3	17.7951304200522	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGGGTTCTGTTTATT	-2	True	NA	2	True	AATAAA	-26	NA	57727613	57719746	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_57721698_57722315_57722439_57723213_57723341_57726907
H1_mix_00046262	chr19	-	310	1	FSM	ENSG00000269304.1	ENST00000594588.1	318	1	57	-49	57	49	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATCTGGTGCCTCCAGACG	NA	False	NA	NA	False	NA	NA	NA	57826721	57826411	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_57826400_57826700
H1_mix_00046268	chr19	-	6789	3	FSM	ENSG00000204514.11	ENST00000435989.7	6244	3	0	-545	0	-300	multi-exon	FALSE	canonical	3	35	junction_1	66.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTCCTGGCTGGTGACC	-14	True	NA	NA	False	ATTAAA	-36	NA	57889037	57868835	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_57875227_57876915_57877043_57888766
H1_mix_00046270	chr19	-	4387	1	NIC	ENSG00000269476.1	novel	1020	6	NA	NA	11914	-23526	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTGTGTGATTTGCAC	NA	False	NA	-2	True	AATAAA	-19	NA	57904677	57900290	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_57900300_57904700
H1_mix_00046271	chr19	-	6157	3	NNC	ENSG00000173480.11	novel	4685	3	NA	NA	2067	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	29	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACCGTGCTTCATCAAT	2089	False	NA	-1	True	NA	NA	NA	57914510	57905773	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_57906517_57907151_57910115_57912059
H1_mix_00046272	chr19	-	4685	3	FSM	ENSG00000173480.11	ENST00000312026.6	4685	3	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	22	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACCGTGCTTCATCAAT	7	True	NA	-1	True	NA	NA	NA	57916592	57905773	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_57910115_57912059_57912190_57916378
H1_mix_00046274	chr19	-	3547	7	FSM	ENSG00000196724.13	ENST00000425570.7	3547	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	14.9851778619927	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTACAGGGACTCATGCCT	-5	True	NA	-11	True	AATAAA	-14	NA	57935387	57922265	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_57922630_57923191_57923290_57925622_57928048_57930427_57930558_57932429_57932647_57933816_57933903_57935160
H1_mix_00046278	chr19	-	4100	7	FSM	ENSG00000166704.13	ENST00000551380.7	4080	7	38	-58	0	58	multi-exon	FALSE	canonical	3	79	junction_1	12.328828005938	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGGAATATGAAGTCTGT	17	True	NA	37	True	NA	NA	NA	58002782	57977017	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_57980280_57988206_57988303_57988594_57988722_57999807_57999897_58000682_58000740_58001288_58001371_58002395
H1_mix_00046280	chr19	-	2731	7	FSM	ENSG00000121413.13	ENST00000601144.6	2539	7	28	-220	0	202	multi-exon	FALSE	canonical	3	90	junction_6	35.357303190273	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGGCCGGGCGTGGTGGC	32	False	NA	NA	False	NA	NA	NA	58098203	58083635	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_58085380_58086173_58086267_58086905_58087009_58087315_58087405_58088687_58088838_58089864_58090387_58098173
H1_mix_00046281	chr19	-	2815	7	NIC	ENSG00000121413.13	novel	2539	7	NA	NA	0	202	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	60.3722250339968	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGGCCGGGCGTGGTGGC	4	True	NA	NA	False	NA	NA	NA	58098231	58083635	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_58085377_58086173_58086267_58086905_58087009_58087315_58087405_58088687_58088838_58089864_58090387_58098114
H1_mix_00046282	chr19	-	5734	2	FSM	ENSG00000121413.13	ENST00000598497.1	5729	2	0	-5	0	0	multi-exon	FALSE	canonical	3	192	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATCTTTTCATTGATTGC	7637	False	NA	-11	True	ACTAAA	-19	NA	58090598	58083837	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_58088838_58089864
H1_mix_00046283	chr19	-	2761	7	NIC	ENSG00000121413.13	novel	2779	7	NA	NA	8	0	combination_of_known_junctions	TRUE	canonical	2	14	junction_6	70.1674584278369	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGATCTTTTCATTGATTG	40	False	NA	-12	True	ACTAAA	-18	NA	58098195	58083838	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_58085377_58086173_58086267_58086905_58087009_58087315_58087405_58088687_58088838_58089864_58090387_58097929
H1_mix_00046284	chr19	-	2594	7	NIC	ENSG00000121413.13	novel	2779	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_6	45.496336848879	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGATCTTTTCATTGATTG	25	True	NA	-12	True	ACTAAA	-18	NA	58098210	58083838	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_58085380_58086173_58086267_58086905_58087009_58087315_58087405_58088687_58088838_58089864_58090387_58098114
H1_mix_00046286	chr19	-	567	2	FSM	ENSG00000121413.13	ENST00000595784.1	567	2	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACGTTCTTGCCCCAGAAA	7422	False	NA	NA	False	NA	NA	NA	58087453	58086579	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_58087009_58087315
H1_mix_00046291	chr19	-	454	2	FSM	ENSG00000268516.3	ENST00000693494.1	439	2	35	-50	35	50	multi-exon	FALSE	canonical	3	19	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTTGTATTAGTCATGA	25	True	NA	50	True	TTTAAA	-3	NA	58278773	58274650	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_58274854_58278522
H1_mix_00046292	chr19	-	3057	4	FSM	ENSG00000283103.4	ENST00000664481.1	3057	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	114.822568435923	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTATTACCATTATAGTTT	-33	True	NA	NA	False	GATAAA	-41	NA	58326942	58309726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_58312289_58312969_58313114_58314805_58315037_58326822
H1_mix_00046293	chr19	-	2349	2	FSM	ENSG00000283103.4	ENST00000669440.2	687	2	4	-1666	0	1666	multi-exon	FALSE	canonical	3	252	junction_1	0	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACGTCACTGAGGTAAGG	-6	True	NA	NA	False	NA	NA	NA	58327248	58313113	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_58315037_58326822
H1_mix_00046296	chr19	-	2245	2	FSM	ENSG00000174586.11	ENST00000425453.3	2261	2	16	0	-7	0	multi-exon	FALSE	canonical	2	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCACCTGTGTAGGTCT	NA	False	NA	NA	False	NA	NA	NA	58362832	58355560	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_58357650_58362676
H1_mix_00046298	chr19	-	2044	3	FSM	ENSG00000152475.7	ENST00000427624.2	2038	3	0	-6	0	6	multi-exon	FALSE	canonical	3	15	junction_1	1	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCTTCCCCTAACTCGAG	8	False	NA	-12	True	ATTAAA	-26	NA	58381022	58367611	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_58369362_58369716_58369929_58380940
H1_mix_00046299	chr19	-	4540	1	FSM	ENSG00000232098.3	ENST00000593393.1	3059	1	-420	-1061	-420	1061	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCAGGAGTGTGATTGCT	764	False	NA	14	True	NA	NA	NA	58407716	58403176	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_58403200_58407700
H1_mix_00046300	chr19	-	2950	1	FSM	ENSG00000131849.13	ENST00000599148.1	2356	1	-182	-412	-182	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTTTAATCTTAGGGGT	4384	False	NA	-2	True	AATAAA	-17	NA	58435766	58432816	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_58432800_58435800
H1_mix_00046301	chr19	-	899	7	NNC	ENSG00000130724.10	novel	885	6	NA	NA	0	54753	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	389.706192748674	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCACGTCCTTGTTAGTA	31	True	NA	NA	False	AAAAAG	-3	NA	58554960	58496698	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_58496726_58551565_58551777_58551905_58551968_58552054_58552186_58552258_58552439_58554044_58554237_58554864
H1_mix_00046302	chr19	-	931	7	NNC	ENSG00000130724.10	novel	885	6	NA	NA	0	54753	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	389.706192748674	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCACGTCCTTGTTAGTA	-2	True	NA	NA	False	AAAAAG	-3	NA	58554993	58496698	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_58496725_58551565_58551777_58551905_58551968_58552054_58552186_58552258_58552439_58554044_58554237_58554864
H1_mix_00046303	chr19	-	1124	7	NNC	ENSG00000130724.10	novel	1208	6	NA	NA	0	54753	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	457.745471486793	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCACGTCCTTGTTAGTA	-2	True	NA	NA	False	AAAAAG	-3	NA	58554993	58496698	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_58496726_58551565_58551777_58551905_58551968_58552054_58552186_58552258_58552439_58554044_58554237_58554672
H1_mix_00046306	chr19	-	1186	7	NNC	ENSG00000130725.8	novel	1159	6	NA	NA	0	59013	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	799.589825403556	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCACGTCCTTGTTAGTA	-18	True	NA	NA	False	AAAAAG	-3	NA	58558611	58496698	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_58496726_58555711_58556230_58556315_58556380_58556686_58556791_58556891_58556931_58557062_58557158_58558272
H1_mix_00046309	chr19	-	575	2	FSM	ENSG00000083807.10	ENST00000601997.1	575	2	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCCCACCCCAACACACTC	95	False	NA	NA	False	NA	NA	NA	58499142	58498474	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_58498692_58498784
H1_mix_00046312	chr19	-	2129	3	FSM	ENSG00000119574.13	ENST00000594051.6	2129	3	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	17	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGAGCACCTGGATCAG	-15	True	NA	-6	True	AATAAA	-32	NA	58519810	58513529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_58514311_58516394_58517674_58519741
H1_mix_00046314	chr19	-	592	2	FSM	ENSG00000119574.13	ENST00000596739.1	592	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGCTTGAGACCCTCAA	236	False	NA	NA	False	NA	NA	NA	58519559	58517622	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_58517674_58519018
H1_mix_00046315	chr19	-	1178	5	FSM	ENSG00000130724.10	ENST00000688139.1	1178	5	0	0	0	0	multi-exon	FALSE	canonical	3	957	junction_1	34.4855042010408	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCAGGCCCATGTGACT	8713	False	NA	-16	True	AATAAA	-16	NA	58554638	58551565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_58551777_58551905_58551968_58552054_58552186_58552258_58552439_58554044
H1_mix_00046316	chr19	-	885	6	FSM	ENSG00000130724.10	ENST00000601220.5	885	6	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_5	239.39540513552	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCAGGCCCATGTGACT	18	True	NA	-16	True	AATAAA	-16	NA	58554973	58551565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_58551777_58551905_58551968_58552054_58552186_58552258_58552439_58554044_58554237_58554864
H1_mix_00046317	chr19	-	894	6	FSM	ENSG00000130724.10	ENST00000312547.7	894	6	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_5	256.858716028871	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCAGGCCCATGTGACT	2	True	NA	-16	True	AATAAA	-16	NA	58555105	58551565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_58551777_58551905_58551968_58552054_58552186_58552258_58552439_58554044_58554237_58554987
H1_mix_00046319	chr19	-	1242	7	FSM	ENSG00000130725.8	ENST00000595957.5	734	7	-79	-429	-79	0	multi-exon	FALSE	canonical	0	0	junction_6	799.589825403556	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTCTGCTTCTTACTTC	4318	False	NA	-6	True	ATTAAA	-17	NA	58559033	58555711	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_58556230_58556315_58556380_58556686_58556791_58556891_58556931_58557062_58557158_58558272_58558355_58558693
H1_mix_00046320	chr19	-	2701	1	FSM	ENSG00000099326.9	ENST00000600004.1	2683	1	0	-18	0	18	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCTCCCTACCTGTGCGT	8954	False	NA	-10	True	AATAAA	-33	NA	58564613	58561912	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_58561900_58564600
H1_mix_00046322	chr19	-	2599	6	FSM	ENSG00000099326.9	ENST00000599369.5	2587	6	4	-16	4	14	multi-exon	FALSE	canonical	2	7	junction_5	10.7591821250502	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGCCTCCCTACCTGT	-4	True	NA	-14	True	AATAAA	-29	NA	58573571	58561916	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_58563505_58569276_58569398_58569515_58569587_58570343_58570528_58570993_58571430_58573372
H1_mix_00046323	chr19	-	4504	2	FSM	ENSG00000099326.9	ENST00000595245.1	3261	2	-1286	43	-56	-43	multi-exon	FALSE	canonical	3	39	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGGTGCCATCATAGCT	736	False	NA	NA	False	NA	NA	NA	58572831	58568209	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_58569398_58569515
H1_mix_00046326	chr19	+	417	1	Intergenic	novelGene_609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTCAGGGTTTTGCTGTGG	NA	False	NA	NA	False	NA	NA	NA	4027493	4027910	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_4027500_4027900
H1_mix_00046327	chr19	+	236	1	Intergenic	novelGene_613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGTAGACCATCACGGACG	NA	False	NA	NA	False	NA	NA	NA	5550737	5550973	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_5550700_5551000
H1_mix_00046329	chr19	+	373	1	Intergenic	novelGene_617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTTGCGTTGTGTCCAC	2403	False	NA	NA	False	NA	NA	NA	12197491	12197864	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_12197500_12197900
H1_mix_00046330	chr19	+	445	1	Intergenic	novelGene_619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAATAAACGAGGCAAAAT	NA	False	NA	NA	False	AAAAAG	-12	NA	15262109	15262554	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_15262100_15262600
H1_mix_00046331	chr19	+	1214	1	Intergenic	novelGene_623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTAAAAATGTCGCC	NA	False	NA	NA	False	AATAAA	-5	NA	19592893	19594107	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_19592900_19594100
H1_mix_00046332	chr19	+	319	1	Intergenic	novelGene_627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTCATAAAAACCCACATG	3703	False	NA	NA	False	NA	NA	NA	20158655	20158974	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_20158700_20159000
H1_mix_00046333	chr19	+	961	1	Intergenic	novelGene_629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	184	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGTATATGCCCAGATG	4966	False	NA	NA	False	NA	NA	NA	20159918	20160879	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_20159900_20160900
H1_mix_00046334	chr19	+	342	1	Intergenic	novelGene_630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCCTAAACCAAAGTATAAA	3924	False	NA	NA	False	NA	NA	NA	20362086	20362428	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_20362100_20362400
H1_mix_00046335	chr19	+	2003	1	Intergenic	novelGene_631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTACATGGTGAATCACAT	NA	False	NA	NA	False	TTTAAA	-7	NA	21283684	21285687	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_21283700_21285700
H1_mix_00046336	chr19	+	2951	1	Intergenic	novelGene_636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATCTAAAGTTGTTTTT	NA	False	NA	15	True	AATAAA	-16	NA	23111322	23114273	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_23111300_23114300
H1_mix_00046337	chr19	+	3753	1	Intergenic	novelGene_637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	224	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGCATCTGCAACTAAAAGA	NA	False	NA	NA	False	AGTAAA	-33	NA	23214988	23218741	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_23215000_23218700
H1_mix_00046338	chr19	+	822	1	Intergenic	novelGene_638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	362	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGATG	NA	False	NA	NA	False	NA	NA	NA	23409172	23409994	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_23409200_23410000
H1_mix_00046339	chr19	+	308	1	Intergenic	novelGene_639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGTTTCTTTTTTAATT	NA	False	NA	NA	False	NA	NA	NA	29803738	29804046	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_29803700_29804000
H1_mix_00046341	chr19	+	313	1	Intergenic	novelGene_646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGGATGGTTCTTACTGG	NA	False	NA	NA	False	NA	NA	NA	42259730	42260043	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_42259700_42260000
H1_mix_00046342	chr19	+	303	1	Intergenic	novelGene_647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGGGGAAAACCTTTACTC	NA	False	NA	NA	False	NA	NA	NA	42490020	42490323	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_42490000_42490300
H1_mix_00046343	chr19	+	266	1	Intergenic	novelGene_648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	301	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTGTGAGAATTATACC	NA	False	NA	NA	False	NA	NA	NA	43325520	43325786	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_43325500_43325800
H1_mix_00046345	chr19	+	3412	1	Intergenic	novelGene_649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	596	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGCCCAGGACCA	NA	False	NA	NA	False	NA	NA	NA	43969359	43972771	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_43969400_43972800
H1_mix_00046348	chr19	+	386	1	Intergenic	novelGene_652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTCAGACATAATTCCT	NA	False	NA	NA	False	NA	NA	NA	52631734	52632120	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_52631700_52632100
H1_mix_00046350	chr19	+	1525	1	Intergenic	novelGene_653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTGTCATGAACCTTTT	NA	False	NA	7	True	AAGAAA	-12	NA	57447784	57449309	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_57447800_57449300
H1_mix_00046351	chr19	+	3485	1	FSM	ENSG00000282798.1	ENST00000631744.1	806	1	-2625	-54	-2625	54	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTATCAAAAGTCGTCTT	NA	False	NA	NA	False	NA	NA	NA	66541	70026	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_66500_70000
H1_mix_00046352	chr19	+	436	1	FSM	ENSG00000282051.1	ENST00000633895.1	436	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACCTCTCTCAGCGTGGG	NA	False	NA	NA	False	NA	NA	NA	197960	198396	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_198000_198400
H1_mix_00046353	chr19	+	1574	4	ISM	ENSG00000099866.16	ENST00000215637.8	1541	5	1248	0	-83	0	3prime_fragment	FALSE	canonical	3	11	junction_1	0.942809041582063	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACGTGTCAGTTTTCTCA	1249	False	NA	24	True	AATAAA	-16	NA	497733	505343	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_498118_498495_498826_501668_501930_504744
H1_mix_00046354	chr19	+	1589	8	FSM	ENSG00000172270.22	ENST00000680326.1	1575	8	-14	0	0	0	multi-exon	FALSE	canonical	1	455	junction_1	2845.88262554297	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTCCTGGCTCCTGTCT	-1	True	NA	24	True	AATAAA	-24	NA	572595	583493	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_572702_579508_579657_580378_580462_580645_580783_581314_581592_582305_582331_582513_582583_582749
H1_mix_00046355	chr19	+	478	1	FSM	ENSG00000070388.12	ENST00000591390.1	1712	1	6	1228	6	-1228	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGTCCGTGTGGTACAACC	12	False	NA	NA	False	NA	NA	NA	639884	640362	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_639900_640400
H1_mix_00046356	chr19	+	2405	3	ISM	ENSG00000070404.10	ENST00000592058.3	589	4	1995	-1621	22	0	3prime_fragment	FALSE	canonical	3	10	junction_1	12.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTGTCCAGGCCTCAGT	140	False	NA	8	True	AATAAA	-15	NA	680055	683392	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_680490_681332_681561_681649
H1_mix_00046358	chr19	+	1306	6	FSM	ENSG00000099864.18	ENST00000592870.5	1346	6	0	40	0	-40	multi-exon	FALSE	canonical	3	16	junction_1	9.59166304662544	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGCCTCTCAGGGATTT	110	False	NA	10	True	ATTAAA	-23	NA	709096	735008	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_709152_726137_726190_727007_727089_727563_727695_731094_731246_734172
H1_mix_00046359	chr19	+	1556	9	FSM	ENSG00000011304.22	ENST00000592804.2	1556	9	0	0	0	0	multi-exon	FALSE	canonical	3	1215	junction_8	214.491513526759	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAGGCATGGGCGCGCAT	NA	False	NA	NA	False	NA	NA	NA	797397	806055	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_797506_799412_799444_803560_803637_804035_804209_804291_804439_804531_804703_804828_804940_805012_805188_805491
H1_mix_00046361	chr19	+	3119	13	NIC	ENSG00000011304.22	novel	3155	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_9	566.445422495995	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCGTTCCGCCTTCGTTG	11	False	NA	25	True	AATAAA	-15	NA	797426	812312	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_797506_799412_799444_803560_803637_804035_804209_804291_804439_804531_804703_804828_804940_805012_805188_806407_806557_808359_808453_808545_808763_810542_810621_810693
H1_mix_00046362	chr19	+	860	5	NNC	ENSG00000172232.10	novel	1713	4	NA	NA	-2962	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1.92028643696715	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGCTCCTGGTTTCTGT	6203	False	NA	1	True	AATAAA	-14	NA	822134	832011	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_822163_828229_828387_829561_829707_830707_830942_831715
H1_mix_00046363	chr19	+	964	4	FSM	ENSG00000116014.10	ENST00000606939.2	964	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	8.17856276425687	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGACCCGGTGGGAATCCG	169	False	NA	NA	False	NA	NA	NA	917502	920748	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_917747_918543_918669_919489_919626_920289
H1_mix_00046364	chr19	+	6100	9	NNC	ENSG00000116017.11	novel	5948	9	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_1	47.8132761374913	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCCTGTGGTGTTTTTTT	-3	True	NA	28	True	ATTAAA	-35	NA	926020	975939	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_926198_929261_929897_932417_932743_960091_960165_964247_964432_964832_965081_966571_966869_968404_968504_971877
H1_mix_00046366	chr19	+	1465	9	FSM	ENSG00000065268.11	ENST00000587001.6	1465	9	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_8	353.978724643163	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTCTCCGGCCTCCTTG	-4	True	NA	27	True	NA	NA	NA	984331	994557	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_984564_985864_985976_989761_989896_990222_990365_990851_990996_991080_991146_991226_991352_991954_992122_994212
H1_mix_00046367	chr19	+	2119	7	FSM	ENSG00000064666.15	ENST00000565096.6	2109	7	-10	0	0	0	multi-exon	FALSE	canonical	3	306	junction_4	1271.39342848703	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGCCAAGAGAGTTGGCG	-1	True	NA	33	True	AATAAA	-23	NA	1026607	1039068	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1026725_1031070_1031193_1032391_1032459_1032558_1032664_1036129_1036247_1036415_1036563_1037624
H1_mix_00046370	chr19	+	548	2	FSM	ENSG00000064687.13	ENST00000530703.1	539	2	-9	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCAGGGAGCCTTCACC	-23	True	NA	NA	False	NA	NA	NA	1040106	1041682	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1040197_1041224
H1_mix_00046371	chr19	+	512	4	FSM	ENSG00000064687.13	ENST00000529442.7	512	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	39.668067202166	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACTCCTGCCACAGTTAG	5798	False	NA	NA	False	NA	NA	NA	1056927	1058732	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1057085_1057313_1057430_1058145_1058270_1058617
H1_mix_00046373	chr19	+	859	4	FSM	ENSG00000167468.19	ENST00000585362.6	859	4	0	0	0	0	multi-exon	FALSE	canonical	3	542	junction_1	1750.7669430535	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGAAGTGGATGAAGATCC	-1	True	NA	NA	False	NA	NA	NA	1104414	1105761	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1104930_1105185_1105281_1105365_1105511_1105657
H1_mix_00046374	chr19	+	5797	10	NIC	ENSG00000118046.17	novel	3293	10	NA	NA	-24	0	combination_of_known_junctions	TRUE	canonical	3	47	junction_8	170.169196847007	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGCTGTGAGGGGTGT	2256	False	NA	14	True	AATAAA	-13	NA	1205753	1228095	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_1207204_1218416_1218501_1219323_1219414_1220372_1220506_1220580_1220718_1221212_1221341_1221948_1222007_1222984_1223173_1223637_1226664_1227592
H1_mix_00046376	chr19	+	3886	9	NNC	ENSG00000167470.14	novel	3892	9	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_6	30.5897756611584	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATTGACTCCCGCCTGC	-7	True	NA	7	True	AATAAA	-14	NA	1248582	1259140	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_1248661_1249889_1250530_1251561_1251650_1251838_1251902_1253953_1254083_1254166_1254479_1254904_1255062_1255421_1255695_1256994
H1_mix_00046378	chr19	+	746	7	FSM	ENSG00000099622.14	ENST00000591935.5	746	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	519.657472657604	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCGGGCGGCACCTGGG	524	False	NA	NA	False	NA	NA	NA	1267228	1274480	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1267293_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1274306
H1_mix_00046379	chr19	+	869	7	FSM	ENSG00000099622.14	ENST00000585630.5	870	7	1	0	1	0	multi-exon	FALSE	canonical	3	110	junction_1	398.235971364829	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCTGACCGCTTCTGA	2562	False	NA	55	True	NA	NA	NA	1269266	1272582	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1269411_1270866_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1272426
H1_mix_00046385	chr19	+	3533	4	FSM	ENSG00000099622.14	ENST00000593093.5	3528	4	-5	0	0	0	multi-exon	FALSE	canonical	3	1187	junction_1	7.58653778449403	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCGAGTCTGTGGTTCA	-6	True	NA	15	True	AATAAA	-20	NA	1269326	1274807	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1269411_1270927_1271468_1271550_1271633_1271980
H1_mix_00046387	chr19	+	2792	8	NIC	ENSG00000099622.14	novel	938	8	NA	NA	-29	0	intron_retention	FALSE	canonical	3	333	junction_7	300.867996005571	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGCCGAGTCTGTGGTT	2593	False	NA	13	True	AATAAA	-18	NA	1269297	1274805	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_1269411_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1272426_1274441_1274648
H1_mix_00046389	chr19	+	1823	5	NNC	ENSG00000099617.4	novel	2424	4	NA	NA	38	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	16.5604951616792	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGTGTCTGTATGTGGGG	15	True	NA	NA	False	AATAAA	-20	NA	1285910	1301432	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_1286309_1295544_1295859_1298550_1298617_1299823_1300796_1301359
H1_mix_00046390	chr19	+	2391	11	NIC	ENSG00000160953.17	novel	4232	14	NA	NA	12	22	combination_of_known_splicesites	FALSE	canonical	3	16	junction_6	166.365891937019	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCCGACGTGCACATCG	-50	True	NA	-13	True	NA	NA	NA	1354933	1376887	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_1355021_1356323_1356450_1357008_1357095_1358393_1358465_1360135_1361033_1362249_1362352_1369264_1369341_1369595_1369647_1370641_1371079_1373071_1373161_1376518
H1_mix_00046391	chr19	+	1526	4	FSM	ENSG00000160953.17	ENST00000590866.2	1513	4	-13	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	142.663551367856	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTCAATAAATTTGGTTT	-25	True	NA	NA	False	NA	NA	NA	1354958	1359894	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1355021_1357008_1357095_1358393_1358465_1358587
H1_mix_00046392	chr19	+	4091	13	FSM	ENSG00000160953.17	ENST00000591806.6	4067	13	-24	0	0	0	multi-exon	FALSE	canonical	3	364	junction_2	61.3539367567848	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGTCTTTTCTGAACC	480	False	NA	16	True	ATTAAA	-16	NA	1356289	1378431	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1356450_1357008_1357095_1358393_1358465_1360135_1361033_1362249_1362352_1364508_1364580_1366304_1366382_1367159_1367221_1369264_1369341_1369595_1369647_1370641_1371079_1373071_1373161_1376518
H1_mix_00046394	chr19	+	2453	2	FSM	ENSG00000160953.17	ENST00000591453.2	2453	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGCTTGTCTTTTCTGA	NA	False	NA	13	True	ATTAAA	-13	NA	1373506	1378428	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1374050_1376518
H1_mix_00046395	chr19	+	909	9	FSM	ENSG00000115286.21	ENST00000546172.7	869	9	-43	3	0	0	multi-exon	FALSE	canonical	2	13	junction_1	595.807802483318	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCCAGTGTGGTGTGTG	282	False	NA	25	True	AATAAA	-18	NA	1383874	1395581	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1383943_1386517_1386640_1387810_1387848_1388524_1388594_1388832_1388939_1390870_1391051_1391118_1391166_1393241_1393331_1395390
H1_mix_00046396	chr19	+	1743	8	FSM	ENSG00000115286.21	ENST00000539480.5	1743	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	490.20782764631	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGTGTGTGGGTGAAAG	-5	True	NA	33	True	AATAAA	-26	NA	1383899	1395589	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1383943_1387810_1387848_1388524_1388594_1388832_1388939_1390870_1391051_1391118_1391166_1393241_1393331_1394417
H1_mix_00046397	chr19	+	1707	7	FSM	ENSG00000115286.21	ENST00000540530.5	1707	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	523.634944933544	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGTGTGTGGGTGAAAG	3899	False	NA	33	True	AATAAA	-26	NA	1387803	1395589	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1387848_1388524_1388594_1388832_1388939_1390870_1391051_1391118_1391166_1393241_1393331_1394417
H1_mix_00046398	chr19	+	3414	10	FSM	ENSG00000071626.17	ENST00000589484.5	3414	10	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_5	395.60417928362	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGTCCGTTTTTTCCC	8196	False	NA	34	True	AATAAA	-27	NA	1415969	1435687	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1417541_1418203_1418371_1418665_1418732_1421147_1421259_1422347_1422397_1428841_1428996_1429966_1429997_1430221_1430363_1432513_1432691_1434739
H1_mix_00046399	chr19	+	1603	3	FSM	ENSG00000115268.10	ENST00000592700.2	1602	3	-1	0	0	0	multi-exon	FALSE	canonical	3	13469	junction_1	1892	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	21	False	NA	29	True	AATAAA	-17	NA	1438418	1440494	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1438429_1438806_1440254_1440348
H1_mix_00046400	chr19	+	1100	1	FSM	ENSG00000268798.1	ENST00000594262.1	1100	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	665	False	NA	NA	False	NA	NA	NA	1440838	1441938	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1440800_1441900
H1_mix_00046401	chr19	+	10158	15	FSM	ENSG00000115266.12	ENST00000233607.6	10151	15	-7	0	-7	0	multi-exon	TRUE	canonical	1	2	junction_5	5.24696219205913	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGCCATCACCTCTTCCT	-9	True	NA	11	True	AATAAA	-19	NA	1450141	1473244	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1450339_1452983_1453143_1453246_1453338_1453430_1453612_1455148_1455258_1455383_1455501_1456075_1456154_1456305_1456405_1456852_1457244_1457964_1458061_1460180_1460321_1460779_1460858_1461036_1461154_1461962_1462178_1465154
H1_mix_00046404	chr19	+	922	3	FSM	ENSG00000115255.12	ENST00000591735.2	1026	3	0	104	0	-104	multi-exon	FALSE	canonical	3	337	junction_1	27.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCACTCTAGAGGGTATC	-19	True	NA	NA	False	NA	NA	NA	1491165	1496077	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1491385_1495293_1495388_1495468
H1_mix_00046405	chr19	+	729	1	FSM	ENSG00000267244.5	ENST00000590823.2	2397	1	-95	1763	-38	-375	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGGGAATCGCCGGGGC	NA	False	NA	NA	False	NA	NA	NA	1822050	1822779	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1822000_1822800
H1_mix_00046406	chr19	+	738	5	FSM	ENSG00000227500.10	ENST00000452128.6	718	5	-20	0	-20	0	multi-exon	FALSE	canonical	3	233	junction_1	30.3315017762062	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTAGGGAGGGGTCCGAG	347	False	NA	NA	False	NA	NA	NA	1905351	1919204	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1905440_1914978_1915027_1917693_1917823_1918126_1918284_1918888
H1_mix_00046407	chr19	+	751	1	FSM	ENSG00000227500.10	ENST00000588555.1	1785	1	-22	1056	0	-1056	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAGTGGATCACCTGAGGT	-12	True	NA	NA	False	NA	NA	NA	1905377	1906128	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1905400_1906100
H1_mix_00046408	chr19	+	1619	2	FSM	ENSG00000213638.6	ENST00000329478.4	1599	2	-21	1	-21	-1	multi-exon	FALSE	canonical	3	36	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGGTGTCTGTTAGGAGG	-12	True	NA	7	True	AATAAA	-14	NA	1905377	1913446	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1905440_1911889
H1_mix_00046409	chr19	+	896	6	FSM	ENSG00000133275.16	ENST00000589385.5	896	6	0	0	0	0	multi-exon	FALSE	canonical	3	675	junction_1	52.6520654865505	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGGGGTCCCTGCGCCCC	NA	False	NA	NA	False	NA	NA	NA	1969825	1979403	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1969960_1978304_1978512_1978601_1978751_1978858_1979094_1979162_1979249_1979318
H1_mix_00046413	chr19	+	686	4	FSM	ENSG00000099840.14	ENST00000590985.2	807	4	42	79	14	-79	multi-exon	FALSE	canonical	2	5	junction_2	1.88561808316413	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCGCACCACTTCCAAGCCT	12	False	NA	NA	False	NA	NA	NA	2096956	2098255	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2097163_2097251_2097333_2097423_2097496_2097928
H1_mix_00046415	chr19	+	1357	3	FSM	ENSG00000104904.12	ENST00000593012.1	1357	3	0	0	0	0	multi-exon	FALSE	canonical	3	7588	junction_2	44.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTATTGCTGGTTTAA	24	False	NA	27	True	AATAAA	-14	NA	2269548	2273325	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2269745_2271384_2271955_2272734
H1_mix_00046419	chr19	+	2005	2	FSM	ENSG00000099860.9	ENST00000592937.1	2007	2	0	2	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGCTTGTATGTTTTCG	0	True	NA	26	True	AATAAA	-14	NA	2476126	2478257	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2476403_2476528
H1_mix_00046420	chr19	+	789	4	FSM	ENSG00000172009.15	ENST00000591149.5	789	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	261.308247095265	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCACCCGCCCCGTCCGGG	4898	False	NA	NA	False	NA	NA	NA	2806984	2810490	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2807053_2807441_2807774_2808242_2808445_2810303
H1_mix_00046421	chr19	+	616	3	FSM	ENSG00000172009.15	ENST00000590533.1	616	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	259.5	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAAGGGTGCTAACCTCGG	5485	False	NA	NA	False	NA	NA	NA	2807571	2810508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2807781_2808242_2808445_2810303
H1_mix_00046422	chr19	+	3549	2	FSM	ENSG00000172006.12	ENST00000588534.1	4029	2	480	0	480	0	multi-exon	FALSE	canonical	3	51	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTGTGTCTTTACTTTT	NA	False	NA	20	True	NA	NA	NA	2831037	2835772	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2832495_2833680
H1_mix_00046423	chr19	+	4708	10	ISM	ENSG00000125912.11	ENST00000587740.5	1210	12	853	4	853	0	intron_retention	FALSE	canonical	3	350	junction_6	105.504081016381	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACCAGTGTTTGGTCTGG	855	False	NA	31	True	AATAAA	-17	NA	3199693	3209571	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_3201627_3203755_3203845_3204004_3204145_3204572_3204752_3205938_3206027_3206151_3206191_3206261_3206426_3207197_3207252_3207390_3207470_3207628
H1_mix_00046424	chr19	+	3624	13	NIC	ENSG00000161082.13	novel	1896	13	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_12	4.57271497277298	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGACTCTTCTCTTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	3224646	3297076	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_3224999_3250984_3251068_3273871_3273924_3275855_3275985_3278030_3278111_3281198_3281346_3282125_3282268_3282351_3282499_3284901_3284965_3285941_3286026_3290230_3290375_3293318_3293487_3295043
H1_mix_00046425	chr19	+	2072	14	NNC	ENSG00000105325.15	novel	5178	14	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	65.8067819026177	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGACGCCAGGGCTGATT	5	True	NA	NA	False	NA	NA	NA	3506313	3535235	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_3506475_3522955_3523059_3525867_3525994_3526119_3526184_3526258_3526387_3526979_3527063_3527634_3527815_3530791_3530858_3531713_3531817_3531910_3532096_3532416_3532651_3533293_3533399_3534420_3534514_3534794
H1_mix_00046428	chr19	+	618	7	FSM	ENSG00000064961.19	ENST00000435022.5	616	7	-2	0	0	0	multi-exon	FALSE	canonical	2	22	junction_3	322.733464160271	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTTCTTGGACCAAAACA	5	True	NA	NA	False	NA	NA	NA	3572976	3576602	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_3572995_3573291_3573348_3573691_3573801_3574369_3574587_3575539_3575661_3576260_3576308_3576552
H1_mix_00046431	chr19	+	4354	6	FSM	ENSG00000179855.9	ENST00000644452.3	4410	6	56	0	56	0	multi-exon	FALSE	canonical	2	5	junction_5	1.6	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTGTGTCATTTTGGG	55	False	NA	7	True	AATAAA	-20	NA	3585533	3593541	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_3585823_3586494_3586681_3586813_3586995_3589442_3589556_3589830_3589913_3590038
H1_mix_00046432	chr19	+	1435	3	FSM	ENSG00000105289.15	ENST00000587641.1	337	3	-856	-242	-856	239	multi-exon	FALSE	canonical	1	1	junction_1	103	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGGAGGCGATATGTGG	4923	False	NA	NA	False	NA	NA	NA	3748757	3751052	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_3749675_3750137_3750185_3750581
H1_mix_00046433	chr19	+	800	5	FSM	ENSG00000105248.16	ENST00000596496.1	800	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	88.9392348741544	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTCAGGGCCGGCCCAA	917	False	NA	NA	False	NA	NA	NA	4248014	4258423	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4248252_4249227_4249329_4251026_4251172_4254354_4254490_4258241
H1_mix_00046434	chr19	+	1733	13	FSM	ENSG00000105255.11	ENST00000597590.5	1634	13	-99	0	-21	0	multi-exon	FALSE	canonical	3	39	junction_11	122.976595560113	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACCTCTTAATAAAGGTC	NA	False	NA	-15	True	NA	NA	NA	4304576	4323806	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4304762_4305945_4306042_4306197_4306330_4307881_4307984_4310272_4310296_4310474_4310597_4311841_4312052_4317181_4317281_4318345_4318506_4318871_4318952_4322985_4323147_4323347_4323437_4323532
H1_mix_00046436	chr19	+	875	5	FSM	ENSG00000167670.16	ENST00000587739.1	875	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	273.349021399382	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCGGAATGCAGATATTT	952	False	NA	NA	False	NA	NA	NA	4409444	4428863	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4409760_4422565_4422796_4423334_4423396_4423805_4423875_4428663
H1_mix_00046437	chr19	+	602	3	Intergenic	novelGene_610	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTACCCTGTTTTGATGG	47	False	NA	8	True	AATAAA	-22	NA	4584393	4586068	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_4584447_4585411_4585583_4585690
H1_mix_00046438	chr19	+	3228	16	FSM	ENSG00000276043.5	ENST00000622802.4	3230	16	2	0	2	0	multi-exon	FALSE	canonical	3	304	junction_5	49.5726627173575	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAAGTTCTCAGAAGTTG	189	False	NA	NA	False	NA	NA	NA	4910368	4961132	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4911039_4929221_4929477_4930715_4930877_4932740_4932957_4941527_4941629_4941744_4941932_4944131_4944256_4944342_4944451_4945860_4945966_4947104_4947212_4950610_4950774_4950858_4950997_4954349_4954489_4954649_4954823_4956708_4956814_4960656
H1_mix_00046440	chr19	+	3626	12	NNC	ENSG00000127663.15	novel	477	5	NA	NA	-3857	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	55.4958117696006	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGTTCCATGCCCCGGCA	473	False	NA	19	True	ATTAAA	-21	NA	5131678	5153598	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_5131712_5131886_5132008_5133882_5134062_5135338_5135562_5137261_5137339_5137620_5137677_5137961_5138071_5143966_5144153_5144247_5144413_5144782_5144903_5150357_5150451_5151334
H1_mix_00046441	chr19	+	545	2	Antisense	novelGene_ENSG00000105426.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGCC	NA	False	NA	NA	False	ATTAAA	-5	NA	5196712	5206067	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr19_+_5196724_5205533
H1_mix_00046443	chr19	+	1151	6	FSM	ENSG00000167733.14	ENST00000577257.5	1151	6	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_3	26.9072480941474	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGACGTCGCGGGCGCTGC	NA	False	NA	NA	False	NA	NA	NA	5680603	5687304	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_5681272_5684780_5684906_5684988_5685120_5686415_5686528_5686899_5686992_5687281
H1_mix_00046444	chr19	+	560	2	FSM	ENSG00000130255.13	ENST00000582380.6	542	2	-18	0	-18	0	multi-exon	FALSE	canonical	1	1	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGGTTTCCCGCACTG	-22	True	NA	NA	False	NA	NA	NA	5681008	5690327	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_5681272_5690030
H1_mix_00046445	chr19	+	417	3	FSM	ENSG00000167733.14	ENST00000577701.1	399	3	-18	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	31	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGGGAGGCCGAGGAAA	6	True	NA	NA	False	AATAAA	-44	NA	5681036	5685328	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_5681272_5684964_5685120_5685301
H1_mix_00046448	chr19	+	874	6	FSM	ENSG00000130255.13	ENST00000577222.5	874	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	6114.11172289156	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTCTCCCTGAAATAAAGA	21	False	NA	3	True	AAGAAA	-19	NA	5681181	5691633	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_5681272_5684964_5685120_5690030_5690328_5690505_5690601_5691318_5691454_5691531
H1_mix_00046450	chr19	+	463	3	FSM	ENSG00000130255.13	ENST00000579446.1	452	3	-11	0	0	0	multi-exon	FALSE	canonical	3	7850	junction_1	3309	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTTGACAGAAGCCCTG	-1	True	NA	23	True	AATAAA	-3	NA	5690294	5691653	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_5690328_5690505_5690601_5691318
H1_mix_00046453	chr19	+	1424	5	FSM	ENSG00000105519.18	ENST00000588776.8	1537	5	0	113	0	-113	multi-exon	FALSE	canonical	3	24	junction_1	4.9180788932265	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGGCTTCCTGAGGCCCCT	15	True	NA	NA	False	NA	NA	NA	5914253	5916098	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_5914310_5914384_5914490_5914562_5914741_5914939_5915147_5915220
H1_mix_00046454	chr19	+	2053	5	FSM	ENSG00000125656.11	ENST00000596070.1	1346	5	-143	-564	-109	365	multi-exon	FALSE	canonical	3	510	junction_1	35.4427355039083	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCGAGCGTGGTGCACC	NA	False	NA	NA	False	AATACA	-5	NA	6361421	6369271	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_6361773_6361868_6362543_6364451_6364640_6366257_6366364_6368537
H1_mix_00046456	chr19	+	391	1	FSM	ENSG00000268785.1	ENST00000600588.1	727	1	278	58	278	-58	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGGAGATGCTGGCAACA	300	False	NA	NA	False	AAGAAA	-21	NA	6593606	6593997	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_6593600_6594000
H1_mix_00046457	chr19	+	2061	13	FSM	ENSG00000125733.18	ENST00000595305.5	2068	13	0	7	0	-7	multi-exon	FALSE	canonical	3	651	junction_7	40.3598397750371	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGTGTCTTATTAGAGGAT	32	True	NA	26	True	TATAAA	-11	NA	6739726	6751519	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_6739786_6741009_6741126_6741224_6741282_6742966_6743115_6743193_6743257_6743493_6743599_6743707_6743837_6744553_6744701_6744799_6744995_6746451_6746562_6749933_6750067_6750291_6750634_6751062
H1_mix_00046460	chr19	+	776	5	FSM	ENSG00000125733.18	ENST00000595319.5	776	5	0	0	0	0	multi-exon	FALSE	canonical	3	704	junction_4	26.1474186106392	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCGATGTGAGTGCTCCCA	42	False	NA	NA	False	NA	NA	NA	6740943	6743829	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_6741282_6742966_6743115_6743193_6743257_6743493_6743599_6743707
H1_mix_00046461	chr19	+	469	3	FSM	ENSG00000125733.18	ENST00000598843.1	469	3	0	0	0	0	multi-exon	FALSE	canonical	3	701	junction_1	27.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCTAGCGCCCCGCCAGAC	538	False	NA	NA	False	NA	NA	NA	6746307	6750373	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_6746562_6749933_6750067_6750291
H1_mix_00046462	chr19	+	309	2	FSM	ENSG00000198723.11	ENST00000600112.1	844	2	0	535	0	99	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCGCTCCCGGGAAGCC	-6	True	NA	NA	False	NA	NA	NA	7505519	7506165	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7505627_7505963
H1_mix_00046463	chr19	+	391	2	FSM	ENSG00000198723.11	ENST00000601292.1	589	2	195	3	195	-3	multi-exon	FALSE	canonical	2	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTCCACTCTTTCCCATC	71	False	NA	-1	True	AATAAA	-14	NA	7506989	7508444	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7507142_7508205
H1_mix_00046472	chr19	+	1057	3	FSM	ENSG00000229833.10	ENST00000601406.5	332	3	-135	-590	-104	0	multi-exon	FALSE	canonical	3	2922	junction_1	186	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTTAAGTGTTTTATTC	5321	False	NA	13	True	AATATA	-22	NA	7629688	7631620	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7629861_7630572_7630660_7630822
H1_mix_00046474	chr19	+	1881	19	FSM	ENSG00000076944.17	ENST00000414284.6	1859	19	-22	0	0	0	multi-exon	TRUE	canonical	2	7	junction_4	124.249214419853	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGCCTACCTCACCTT	-21	True	NA	21	True	AATAAA	-21	NA	7637104	7647873	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7637187_7638725_7638776_7639018_7639101_7639730_7639808_7640739_7640810_7640899_7641004_7641704_7641854_7642033_7642119_7642202_7642334_7642428_7642537_7642765_7642824_7642982_7643049_7643164_7643246_7644613_7644753_7645196_7645307_7646248_7646345_7647161_7647248_7647353_7647512_7647724
H1_mix_00046477	chr19	+	801	4	ISM	ENSG00000268297.1	ENST00000596555.1	870	9	1207	450	1207	-450	internal_fragment	FALSE	canonical	2	5	junction_1	5.18544972870135	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCCGTCTCAAAAAAAAAAAA	1283	False	NA	NA	False	NA	NA	NA	7788755	7790171	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_7788901_7789208_7789305_7789495_7789644_7789759
H1_mix_00046478	chr19	+	3404	12	FSM	ENSG00000076984.18	ENST00000397983.7	3396	12	-8	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	51.1775389782253	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCTTCCTTTTCTTCCAC	-6	True	NA	0	True	TTTAAA	-44	NA	7903876	7914459	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7904069_7905807_7905856_7909754_7909897_7910062_7910130_7910259_7910374_7910452_7910573_7910695_7910804_7910979_7911160_7911249_7911331_7911435_7911579_7912148_7912195_7912296
H1_mix_00046480	chr19	+	713	5	FSM	ENSG00000090661.12	ENST00000558268.5	713	5	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	203.963231980669	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCGATGGTTCCGGAGA	-3	True	NA	NA	False	NA	NA	NA	8209302	8255655	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_8209495_8210682_8210863_8251075_8251250_8254498_8254617_8255606
H1_mix_00046481	chr19	+	1602	11	NIC	ENSG00000090661.12	novel	1803	12	NA	NA	6	-9	combination_of_known_junctions	FALSE	canonical	3	19	junction_2	142.754649661578	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAGCCAAATTTTCTGC	11	True	NA	3	True	ATTAAA	-4	NA	8209361	8262409	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_8209495_8210705_8210863_8254498_8254617_8255606_8255726_8255821_8255880_8256235_8256287_8256617_8256711_8256948_8257078_8257878_8257986_8261687_8261845_8261929
H1_mix_00046483	chr19	+	2401	9	FSM	ENSG00000090661.12	ENST00000557925.1	2401	9	0	0	0	0	multi-exon	FALSE	canonical	3	435	junction_1	30.4689903836671	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTCTGCCTGAGAACT	NA	False	NA	12	True	ATTAAA	-13	NA	8250525	8262418	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_8251250_8254498_8254617_8255606_8255726_8255821_8256287_8256617_8256711_8256948_8257078_8257878_8257986_8261687_8261845_8261929
H1_mix_00046487	chr19	+	1650	6	NNC	ENSG00000099785.11	novel	1667	5	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	82.6810740133436	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTGGACAAAATGGACTT	-15	True	NA	7	True	AATAAA	-9	NA	8413290	8439004	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_8413421_8418538_8418808_8421788_8422017_8426608_8426805_8430657_8430868_8438387
H1_mix_00046491	chr19	+	742	4	FSM	ENSG00000099783.12	ENST00000597813.5	630	4	-35	-77	-35	77	multi-exon	FALSE	canonical	0	0	junction_2	1670.3413490129	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTGTCTCAGGGACTCT	6137	False	NA	NA	False	NA	NA	NA	8444884	8463929	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_8445112_8455404_8455575_8463496_8463505_8463592
H1_mix_00046492	chr19	+	4022	7	NNC	ENSG00000130803.15	novel	4056	7	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_3	61.5965817954932	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTATGGATATTTCATT	-6	True	NA	5	True	AATAAA	-18	NA	9140413	9163408	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_9140593_9155924_9156042_9156611_9156737_9157267_9157395_9157979_9158076_9158825_9158909_9160113
H1_mix_00046493	chr19	+	2312	5	FSM	ENSG00000130803.15	ENST00000590152.1	2312	5	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_2	11.8321595661992	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCGCCTGCTTTAGAGACA	NA	False	NA	NA	False	NA	NA	NA	9156011	9161433	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_9156042_9156611_9157395_9157979_9158076_9158825_9158909_9160113
H1_mix_00046495	chr19	+	620	7	FSM	ENSG00000270011.8	ENST00000603024.5	610	7	-10	0	-5	0	multi-exon	FALSE	canonical	0	0	junction_3	22.8035085019828	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTGCAGGGTGGCTGAC	-19	True	NA	NA	False	NA	NA	NA	9324168	9378311	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_9324229_9324694_9324781_9341101_9341185_9364861_9364949_9371609_9371753_9376315_9376424_9378258
H1_mix_00046497	chr19	+	2836	7	NIC	ENSG00000188321.14	novel	588	6	NA	NA	9	-4	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	22.8594740874666	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAAGATCCTGAGTTATC	52	False	NA	12	True	AATAAA	-14	NA	9324239	9343839	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_9324405_9324694_9324781_9337795_9337859_9338493_9338583_9339192_9339320_9341101_9341185_9341616
H1_mix_00046499	chr19	+	4536	12	NNC	ENSG00000270011.8	novel	911	10	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	22.145648603419	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGCTGGCAATGTGGAC	524	False	NA	17	True	AATAAA	-14	NA	9324711	9382185	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_9324781_9337795_9337859_9338493_9338583_9339192_9339320_9341101_9341185_9341694_9343785_9376315_9376424_9378258_9378345_9378961_9379089_9379526_9379620_9380056_9380140_9380667
H1_mix_00046501	chr19	+	2486	5	FSM	ENSG00000267106.9	ENST00000586614.6	2486	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	55.1333610439269	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGAGTGAGACTCCATCT	-1	True	NA	NA	False	NA	NA	NA	9621504	9635446	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_9621646_9626783_9626861_9627715_9627807_9632227_9632418_9633459
H1_mix_00046504	chr19	+	351	1	FSM	ENSG00000267119.1	ENST00000585756.1	315	1	37	-73	37	73	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	NA	False	NA	NA	False	AATAAA	-27	NA	9820177	9820528	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_9820200_9820500
H1_mix_00046505	chr19	+	367	4	NIC	ENSG00000198258.11	novel	407	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	1971.32617516455	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTGTTGTTGTCTCTGT	-1	True	NA	18	True	AATAAA	-12	NA	9827917	9830113	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_9827985_9828326_9828394_9828591_9828676_9829964
H1_mix_00046506	chr19	+	891	6	FSM	ENSG00000127445.14	ENST00000590540.5	702	6	-189	0	-106	0	multi-exon	FALSE	canonical	3	54	junction_1	837.596466086146	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGCTCTCCTGTGTCTC	7232	False	NA	13	True	ATTAAA	-13	NA	9835150	9849682	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_9835403_9836822_9836876_9838435_9838649_9848029_9848141_9849089_9849202_9849532
H1_mix_00046512	chr19	+	1017	3	FSM	ENSG00000130810.20	ENST00000486482.1	1017	3	0	0	0	0	multi-exon	FALSE	canonical	3	757	junction_1	22	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGCAGGGCCCACTAAGC	694	False	NA	NA	False	NA	NA	NA	10110457	10111634	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10110615_10110696_10110867_10110944
H1_mix_00046513	chr19	+	791	8	FSM	ENSG00000105364.14	ENST00000591054.5	777	8	-14	0	-14	0	multi-exon	FALSE	canonical	2	5	junction_5	489.321646230154	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGATCCCGGCTGTTGGT	-39	True	NA	NA	False	NA	NA	NA	10251929	10258667	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10252010_10252145_10252311_10252396_10252464_10252550_10252702_10254588_10254641_10258221_10258329_10258412_10258523_10258608
H1_mix_00046514	chr19	+	410	3	FSM	ENSG00000105364.14	ENST00000592071.1	1487	3	0	1077	0	-1077	multi-exon	FALSE	canonical	3	1018	junction_1	45	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGCCTAAATGGAGCA	23	True	NA	NA	False	NA	NA	NA	10252257	10254640	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10252311_10252396_10252702_10254588
H1_mix_00046515	chr19	+	1195	3	FSM	ENSG00000105371.10	ENST00000340992.4	1176	3	-19	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	6	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGCTTCCTTAACCAGC	-1	True	NA	12	True	AATAAA	-41	NA	10286954	10288502	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10287407_10287612_10287839_10287985
H1_mix_00046520	chr19	+	601	7	FSM	ENSG00000129353.15	ENST00000590382.5	586	7	-15	0	-15	0	multi-exon	FALSE	canonical	1	2	junction_2	378.999450307429	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTACACCGTCTCTTGGT	-38	True	NA	NA	False	NA	NA	NA	10602441	10631918	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10602562_10626252_10626302_10631056_10631142_10631274_10631386_10631474_10631536_10631625_10631750_10631867
H1_mix_00046522	chr19	+	3525	23	NIC	ENSG00000129353.15	novel	3784	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_22	246.570464171305	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGTCCAGGCCTGGTGTG	-20	True	NA	18	True	AATAAA	-12	NA	10625519	10644550	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_10625671_10626252_10626302_10627721_10627796_10627919_10628005_10631056_10631142_10631274_10631386_10631474_10631536_10631625_10631750_10631867_10631952_10632043_10632157_10634755_10634888_10634973_10635074_10635162_10635256_10635430_10635516_10636322_10636586_10636661_10636757_10637643_10637748_10637855_10637930_10638022_10638094_10638226_10638316_10642366_10642452_10642896_10643022_10643278
H1_mix_00046523	chr19	+	6337	19	NIC	ENSG00000129351.17	novel	6119	20	NA	NA	0	0	intron_retention	FALSE	canonical	1	1	junction_18	399.737294133269	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCCCGTCTTAGGCCTGGG	NA	False	NA	9	True	AATAAA	-14	NA	10654260	10689846	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_10654488_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683136_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10684415_10687709_10689178
H1_mix_00046524	chr19	+	2622	18	FSM	ENSG00000129351.17	ENST00000589998.5	2622	18	0	0	0	0	multi-exon	FALSE	canonical	3	946	junction_13	202.490958403812	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCAAAAGCCCACCTTTG	6	True	NA	-66	True	NA	NA	NA	10654360	10684761	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10654488_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683136_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10684415
H1_mix_00046525	chr19	+	6249	19	NIC	ENSG00000129351.17	novel	6119	20	NA	NA	0	0	intron_retention	FALSE	canonical	1	1	junction_18	426.05506295157	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCCCGTCTTAGGCCTGGG	6	True	NA	9	True	AATAAA	-14	NA	10654360	10689846	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_10654488_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683124_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10684415_10687709_10689178
H1_mix_00046526	chr19	+	5644	19	NIC	ENSG00000129351.17	novel	6119	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	104	junction_17	426.269234025332	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGCGTTCGTTCATTTT	6	True	NA	34	True	AATAAA	-35	NA	10654360	10692417	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_10654488_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683136_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10688549_10688679_10689178
H1_mix_00046527	chr19	+	5988	20	NIC	ENSG00000129351.17	novel	6119	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	441	junction_18	422.09843806006	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTGTTTCATTCACTCA	6	True	NA	15	True	AATAAA	-16	NA	10654360	10692398	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_10654488_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683136_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10687345_10687709_10688549_10688679_10689178
H1_mix_00046528	chr19	+	599	4	FSM	ENSG00000129351.17	ENST00000589283.5	599	4	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_1	676.905212468235	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCTCCTACTCAAGGGGG	410	False	NA	NA	False	NA	NA	NA	10654937	10671423	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10655148_10670515_10670609_10670973_10671204_10671357
H1_mix_00046529	chr19	+	3685	18	NIC	ENSG00000129351.17	novel	2697	19	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	472	junction_1	345.79560736962	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCGGCCCTTGCGTCTT	422	False	NA	40	True	AATACA	-15	NA	10654949	10685765	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_10655124_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683124_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10684415
H1_mix_00046530	chr19	+	3598	18	NIC	ENSG00000129351.17	novel	3035	17	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	472	junction_1	308.080001293871	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCGGCCCTTGCGTCTT	-13	True	NA	40	True	AATACA	-15	NA	10655024	10685765	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_10655124_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683136_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10684415
H1_mix_00046531	chr19	+	3377	20	NIC	ENSG00000129351.17	novel	3219	19	NA	NA	31	-1	combination_of_known_junctions	FALSE	canonical	3	441	junction_18	464.467693415965	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGCCCGTCTTAGGCCTGG	17	False	NA	8	True	AATAAA	-13	NA	10655054	10689845	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_10655124_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683136_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10687345_10687709_10688549_10688679_10689178
H1_mix_00046532	chr19	+	3035	17	FSM	ENSG00000129351.17	ENST00000250241.12	3035	17	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_16	410.434659081077	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCGGCCCTTGCGTCTT	2762	False	NA	40	True	AATACA	-15	NA	10670536	10685765	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683136_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10684858
H1_mix_00046541	chr19	+	468	3	FSM	ENSG00000142453.12	ENST00000588947.5	468	3	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	719.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGGACTACGTGCGGACA	50	False	NA	NA	False	NA	NA	NA	10871595	10909136	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10871923_10908038_10908146_10909102
H1_mix_00046542	chr19	+	2766	16	FSM	ENSG00000142453.12	ENST00000586221.5	2766	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	394.557890415195	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCAGTTTTCTTCTCCTTCT	146	False	NA	23	True	AATAAA	-23	NA	10871827	10922777	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10871923_10904950_10905077_10908038_10908146_10909102_10909208_10912183_10912295_10913876_10914055_10916406_10916498_10916695_10916778_10919594_10919681_10919832_10919967_10920435_10920574_10920658_10920749_10920833_10920947_10921049_10921128_10921374_10921444_10921614
H1_mix_00046543	chr19	+	596	6	FSM	ENSG00000142453.12	ENST00000590039.5	596	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	744.454860955317	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTACGCGGTGGAGGCCAG	171	False	NA	NA	False	NA	NA	NA	10871852	10912252	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10871923_10904950_10905077_10908038_10908146_10908549_10908669_10909102_10909208_10912183
H1_mix_00046544	chr19	+	1644	3	NIC	ENSG00000142444.7	novel	1347	2	NA	NA	-79	-7	combination_of_known_junctions	FALSE	canonical	3	7	junction_2	88.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAAAACCAGGTGGTAAA	7	True	NA	-21	True	NA	NA	NA	10928731	10933508	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_10928917_10929013_10930325_10933360
H1_mix_00046545	chr19	+	7283	34	NIC	ENSG00000127616.20	novel	5637	35	NA	NA	-103	0	intron_retention	FALSE	canonical	3	177	junction_28	250.763495306858	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCTTAAAGAGAGAGAGAG	NA	False	NA	105	True	NA	NA	NA	10960828	11062028	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_10961175_10984120_10984374_10985272_10985406_10986188_10986594_10986904_10987004_10987665_10987925_10989316_10989444_10991149_10991324_10994827_10995002_10996212_10996381_10996493_10996545_11003028_11003160_11003339_11003398_11007901_11008024_11010380_11010532_11012948_11013113_11018956_11019024_11019590_11019702_11021724_11021968_11023517_11023632_11024330_11024439_11025421_11025509_11026299_11026347_11027783_11027951_11030729_11030894_11033289_11033518_11034122_11034201_11034913_11035133_11039457_11041561_11058254_11058364_11058787_11058890_11059752_11059886_11060044_11060188_11061783
H1_mix_00046548	chr19	+	3587	27	NNC	ENSG00000127616.20	novel	4035	28	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	420.949590440836	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCTTAAAGAGAGAGAGAG	3695	False	NA	105	True	NA	NA	NA	10994974	11062028	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_10995002_10996212_10996381_10996493_10996545_11003028_11003160_11003339_11003398_11007904_11008024_11010380_11010532_11012948_11013113_11018956_11019024_11019590_11019702_11021724_11021968_11023517_11023632_11024330_11024439_11025421_11025509_11026299_11026347_11027783_11027951_11030729_11030894_11033289_11033518_11033766_11033866_11034122_11034201_11034913_11035133_11041306_11041561_11058254_11058364_11058787_11058890_11059752_11059886_11060044_11060188_11061783
H1_mix_00046549	chr19	+	3206	22	NNC	ENSG00000127616.20	novel	3522	25	NA	NA	0	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	296.101173185627	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAGAAGAAATAGACTCAGA	35	False	NA	NA	False	AATAAA	-11	NA	10996263	11059206	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_10996381_10996493_10996545_11003028_11003160_11003339_11003398_11007904_11008024_11010380_11010532_11012948_11013113_11018956_11019024_11019590_11019702_11021724_11021968_11023517_11023632_11024330_11024439_11025421_11025509_11026299_11026347_11027783_11027951_11030729_11030894_11033289_11033518_11034122_11034201_11034913_11035133_11041306_11041561_11058254_11058364_11058787
H1_mix_00046550	chr19	+	3522	25	FSM	ENSG00000127616.20	ENST00000647268.1	3522	25	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	296.868491156719	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGATGCATGTGCGTCAC	35	False	NA	NA	False	NA	NA	NA	10996263	11062140	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10996381_10996496_10996545_11003028_11003160_11003339_11003398_11007901_11008024_11010380_11010532_11012948_11013113_11018956_11019024_11019590_11019702_11021724_11021968_11023517_11023632_11024330_11024439_11025421_11025509_11026299_11026347_11027783_11027951_11030729_11030894_11033289_11033518_11034122_11034201_11034913_11035133_11041306_11041561_11058254_11058364_11058787_11058890_11059752_11059886_11060044_11060188_11061783
H1_mix_00046555	chr19	+	695	1	FSM	ENSG00000273733.1	ENST00000615848.1	491	1	-112	-92	-112	92	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGGAGAAACCTGAGGCTC	NA	False	NA	NA	False	NA	NA	NA	11220970	11221665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11221000_11221700
H1_mix_00046556	chr19	+	1041	11	NIC	ENSG00000183401.12	novel	1049	11	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	8.55336191213724	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCCCCGACTGTTAGTCT	7	True	NA	5	True	AATAAA	-18	NA	11346530	11354941	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_11346635_11349653_11349688_11349937_11350027_11350117_11350200_11350807_11351004_11351905_11351974_11352056_11352134_11353450_11353573_11353791_11353875_11354579_11354697_11354872
H1_mix_00046557	chr19	+	2684	10	FSM	ENSG00000105520.11	ENST00000688289.1	2697	10	11	2	11	-2	multi-exon	TRUE	canonical	3	21	junction_8	13.4641728530677	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTGGCCATCTGCCTTC	-4	True	NA	24	True	AATAAA	-42	NA	11355442	11365696	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11355573_11356801_11356977_11357659_11357740_11359531_11359721_11359820_11359957_11361216_11361489_11362512_11362690_11363712_11363836_11364160_11364213_11364346
H1_mix_00046558	chr19	+	2562	10	NIC	ENSG00000105520.11	novel	2727	10	NA	NA	16	-28	combination_of_known_junctions	FALSE	canonical	3	7	junction_3	18.7089468265326	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAATAAAGACCTGTTTG	1	True	NA	-2	True	AATAAA	-16	NA	11355447	11365670	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_11355573_11356801_11356977_11357659_11357740_11359606_11359721_11359820_11359957_11361216_11361489_11362512_11362690_11363712_11363820_11364160_11364213_11364346
H1_mix_00046559	chr19	+	578	6	FSM	ENSG00000130175.10	ENST00000593101.5	578	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	485.095289608135	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAGGACTGGAAGAAGGC	96	False	NA	NA	False	NA	NA	NA	11435739	11441321	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11435809_11436040_11436197_11436388_11436506_11437875_11437972_11438066_11438125_11441239
H1_mix_00046560	chr19	+	2194	17	FSM	ENSG00000130175.10	ENST00000587327.5	2189	17	-5	0	0	0	multi-exon	FALSE	canonical	3	182	junction_10	242.255151841504	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCACCACCCCCAGCCCTG	96	False	NA	-73	True	NA	NA	NA	11435739	11450867	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11436197_11436388_11436506_11437875_11437972_11438066_11438125_11441239_11441358_11442385_11442516_11445388_11445474_11446271_11446351_11447073_11447161_11447438_11447619_11447722_11447790_11448221_11448292_11448539_11448630_11448913_11448989_11449075_11449176_11449265_11449429_11450645
H1_mix_00046561	chr19	+	330	1	FSM	ENSG00000213304.3	ENST00000483614.1	531	1	-75	276	-75	-276	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCAGAGCAGCACCCACAA	NA	False	NA	NA	False	NA	NA	NA	11521892	11522222	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11521900_11522200
H1_mix_00046562	chr19	+	576	5	FSM	ENSG00000130176.8	ENST00000586059.5	565	5	-11	0	-11	0	multi-exon	FALSE	canonical	3	24	junction_1	42.5286668025227	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACCGCCCTGTCCTCACT	1031	False	NA	NA	False	NA	NA	NA	11539882	11547906	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11540022_11541075_11541198_11546674_11546742_11546831_11546970_11547796
H1_mix_00046563	chr19	+	4505	3	FSM	ENSG00000171295.13	ENST00000414255.1	796	3	213	-3922	213	384	multi-exon	FALSE	canonical	3	10	junction_2	0.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTGTCTAAATACAAGCC	NA	False	NA	NA	False	AATAAA	-8	NA	11830198	11835600	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11830410_11830616_11830678_11831367
H1_mix_00046564	chr19	+	523	4	FSM	ENSG00000219665.8	ENST00000589551.1	523	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	49.7348525237137	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGGAGAATCGCTTGAAC	75	False	NA	NA	False	NA	NA	NA	11987766	12003595	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11987824_11990168_11990382_12001773_12001823_12003391
H1_mix_00046565	chr19	+	4028	1	FSM	ENSG00000219665.8	ENST00000592187.1	4000	1	-88	60	-88	-60	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTGAAGGAGCTGCAGAT	NA	False	NA	NA	False	TTTAAA	-41	NA	12023106	12027134	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12023100_12027100
H1_mix_00046566	chr19	+	560	5	FSM	ENSG00000173875.14	ENST00000597691.5	576	5	16	0	16	0	multi-exon	FALSE	canonical	2	2	junction_2	32.7595405950694	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTGCCGGAGTAAAACC	8	True	NA	NA	False	NA	NA	NA	12610935	12627805	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12611083_12612225_12612366_12623699_12623827_12624649_12624711_12627720
H1_mix_00046567	chr19	+	688	5	FSM	ENSG00000173875.14	ENST00000598225.5	704	5	16	0	16	0	multi-exon	FALSE	canonical	0	0	junction_2	33.2819395468473	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAGTCACACTGGAGAAAA	8	True	NA	NA	False	NA	NA	NA	12610935	12627982	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12611083_12612225_12612317_12623699_12623827_12624649_12624711_12627720
H1_mix_00046570	chr19	+	1340	8	NNC	ENSG00000198356.12	novel	1368	8	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	448.095470876919	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTGACATTGGGAG	6105	False	NA	27	True	AATAAA	-16	NA	12737129	12748323	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_12737157_12737458_12737667_12738510_12738659_12745376_12745526_12745608_12745760_12747196_12747305_12747394_12747593_12747972
H1_mix_00046571	chr19	+	1346	8	FSM	ENSG00000198356.12	ENST00000591090.5	1368	8	22	0	22	0	multi-exon	FALSE	canonical	1	1	junction_1	449.247897568133	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTGACATTGGGAG	6136	False	NA	27	True	AATAAA	-16	NA	12737160	12748323	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12737194_12737458_12737667_12738510_12738659_12745376_12745526_12745608_12745760_12747196_12747305_12747394_12747593_12747972
H1_mix_00046572	chr19	+	592	3	FSM	ENSG00000198356.12	ENST00000590633.1	592	3	0	0	0	0	multi-exon	FALSE	canonical	3	1175	junction_2	39.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACCCACGGGCCACACCC	2	True	NA	NA	False	NA	NA	NA	12737496	12745650	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12737667_12738510_12738659_12745376
H1_mix_00046573	chr19	+	878	4	FSM	ENSG00000104889.7	ENST00000590121.2	878	4	0	0	0	0	multi-exon	FALSE	canonical	3	896	junction_3	41.3843770844345	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGGCTCACGGCTGTAA	51	False	NA	20	True	AATAAA	-35	NA	12806676	12807976	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12806801_12807007_12807080_12807205_12807330_12807418
H1_mix_00046575	chr19	+	1252	6	FSM	ENSG00000104889.7	ENST00000593017.2	1245	6	-7	0	0	0	multi-exon	TRUE	canonical	3	894	junction_4	29.3802654855262	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCACACGTAGGGGATGT	51	False	NA	23	True	ATTAAA	-13	NA	12806676	12813525	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12807080_12807205_12807507_12810070_12810209_12810316_12810405_12813082_12813207_12813327
H1_mix_00046576	chr19	+	4729	25	NIC	ENSG00000105613.10	novel	4853	26	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_14	15.5221615762754	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTGGGGCTCACTCCT	-24	True	NA	27	True	AATAAA	-20	NA	12838472	12874952	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_12838656_12840445_12840535_12840990_12841067_12843528_12843608_12847289_12847451_12847611_12847688_12847847_12848058_12851933_12852036_12852114_12852248_12852327_12852396_12858361_12858442_12858530_12858740_12864808_12864948_12865045_12865179_12865716_12865819_12865979_12866103_12866652_12866763_12867473_12867653_12867729_12867978_12868642_12868850_12869065_12869296_12870823_12870947_12871035_12871173_12873323_12873512_12873608
H1_mix_00046578	chr19	+	957	3	FSM	ENSG00000179218.15	ENST00000587486.6	957	3	0	0	0	0	multi-exon	FALSE	canonical	3	2624	junction_2	154.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCCTGGGGGTGGTGGC	NA	False	NA	NA	False	NA	NA	NA	12938577	12940147	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12939236_12939427_12939632_12940052
H1_mix_00046580	chr19	+	1045	6	FSM	ENSG00000179262.10	ENST00000588329.5	1034	6	-11	0	0	0	multi-exon	FALSE	canonical	3	867	junction_5	206.459100065848	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCCTGGAGTTCCTGCG	-12	True	NA	NA	False	NA	NA	NA	12945854	12949282	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12946021_12947847_12948010_12948176_12948359_12948496_12948553_12948685_12949160_12949277
H1_mix_00046582	chr19	+	1295	2	FSM	ENSG00000160888.7	ENST00000587885.1	1291	2	-4	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTACTGTGGGCTGTGCT	-44	True	NA	NA	False	TTTAAA	-25	NA	13150410	13154249	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_13150553_13153096
H1_mix_00046583	chr19	+	1882	2	NNC	ENSG00000160888.7	novel	2110	2	NA	NA	1081	79469	intron_retention	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCAAAAAACCTACACTGAA	1	True	NA	NA	False	AAAAAG	-5	NA	13153055	13234380	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_13154908_13234350
H1_mix_00046584	chr19	+	528	2	FSM	ENSG00000104957.14	ENST00000587098.1	617	2	-9	98	-7	-98	multi-exon	FALSE	canonical	3	13	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAGGCAGGAGGATCGCT	-14	True	NA	NA	False	NA	NA	NA	13731752	13732504	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_13731951_13732174
H1_mix_00046587	chr19	+	1969	10	NIC	ENSG00000104957.14	novel	1922	11	NA	NA	18	2	intron_retention	FALSE	canonical	1	1	junction_1	41.6247196260902	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGTTGTTAGATGGACCC	18	True	NA	23	True	ATTAAA	-23	NA	13731784	13763298	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_13731932_13732174_13732286_13751607_13751812_13754288_13754343_13756196_13756280_13757417_13757474_13757785_13757847_13758867_13759273_13762298_13762438_13762589
H1_mix_00046591	chr19	+	3353	6	NIC	ENSG00000037757.14	novel	3178	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	14	junction_3	14.8942942095287	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTTTGTTCGTAATGTTT	12	True	NA	23	True	AATAAA	-20	NA	13764548	13774282	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_13764721_13764870_13765110_13765953_13766130_13768358_13768738_13768823_13769049_13772120
H1_mix_00046592	chr19	+	2921	12	ISM	ENSG00000132003.10	ENST00000590508.6	4731	14	9618	980	9601	859	3prime_fragment	FALSE	canonical	3	73	junction_5	15.3789595452428	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAAGGGGTGTGTGCTTGGG	325	False	NA	NA	False	NA	NA	NA	13805060	13831274	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_13805149_13808835_13808985_13809069_13809221_13812996_13813165_13814514_13814866_13817215_13817354_13817721_13817977_13819356_13819493_13823345_13823501_13825549_13825714_13828644_13828727_13830190
H1_mix_00046593	chr19	+	2743	24	FSM	ENSG00000132024.18	ENST00000586955.5	2743	24	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	51.6766520830287	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCAGCTCTGTCCTGTCTG	6940	False	NA	8	True	AATAAA	-20	NA	13913252	13930879	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_13913303_13913403_13913639_13918069_13918195_13918503_13918577_13918745_13918818_13918911_13919043_13919129_13919203_13920556_13920669_13920749_13920923_13923332_13923456_13923547_13923607_13923694_13923812_13926516_13926591_13926666_13926726_13926820_13926873_13926977_13927078_13927174_13927266_13927892_13928031_13928123_13928189_13929378_13929443_13929533_13929661_13930077_13930155_13930241_13930290_13930374
H1_mix_00046595	chr19	+	2163	17	FSM	ENSG00000132024.18	ENST00000680977.1	2163	17	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	49.3200247744261	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATAAAATAGCCAGGGCC	NA	False	NA	-19	True	NA	NA	NA	13919826	13930852	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_13919940_13920556_13920669_13920749_13920923_13923332_13923456_13923547_13923607_13923694_13923812_13926516_13926591_13926666_13926726_13926820_13926873_13926977_13927078_13927174_13927266_13927892_13928189_13929378_13929443_13929533_13929661_13930077_13930155_13930241_13930290_13930374
H1_mix_00046599	chr19	+	2900	18	FSM	ENSG00000123146.20	ENST00000358600.7	2751	18	301	-450	13	0	multi-exon	FALSE	canonical	1	2	junction_9	3.69793732835334	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTTGCCTGCTGGTGGT	13	False	NA	14	True	ATTAAA	-18	NA	14381456	14408725	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_14381546_14388449_14388501_14388701_14388819_14390923_14391080_14397657_14397805_14397888_14397936_14398061_14398140_14401385_14401564_14401652_14401761_14402596_14402863_14404382_14404563_14405747_14405940_14406330_14406558_14406699_14406767_14406868_14406961_14407060_14407230_14407907_14408010_14408091
H1_mix_00046600	chr19	+	686	3	FSM	ENSG00000123143.13	ENST00000586039.1	686	3	0	0	0	0	multi-exon	FALSE	canonical	3	1152	junction_1	50.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTGCATCCTCCGTGTC	NA	False	NA	20	True	AAAAAG	-19	NA	14470174	14471858	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_14470306_14470574_14470852_14471580
H1_mix_00046601	chr19	+	222	1	FSM	ENSG00000224543.4	ENST00000600149.1	222	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTATAAATAATGGCTGT	NA	False	NA	NA	False	NA	NA	NA	14489387	14489609	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_14489400_14489600
H1_mix_00046602	chr19	+	1061	8	FSM	ENSG00000099797.15	ENST00000593637.5	1043	8	-18	0	0	0	multi-exon	FALSE	canonical	3	1357	junction_5	85.2750651403672	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGTGTCCTGCCCCAAC	-3	True	NA	NA	False	NA	NA	NA	14529591	14565258	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_14529712_14562524_14562576_14563205_14563258_14563657_14563703_14563799_14563904_14563981_14564288_14564785_14564859_14564948
H1_mix_00046608	chr19	+	584	6	FSM	ENSG00000099797.15	ENST00000599101.5	584	6	0	0	0	0	multi-exon	FALSE	canonical	3	1307	junction_3	79.304476544518	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGGGCCCACAGCTCTCC	9	True	NA	-53	True	NA	NA	NA	14564693	14565925	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_14564859_14564948_14564993_14565065_14565124_14565201_14565291_14565617_14565664_14565743
H1_mix_00046610	chr19	+	572	5	FSM	ENSG00000160961.12	ENST00000596285.5	573	5	1	0	1	0	multi-exon	TRUE	canonical	3	47	junction_3	3.69966214673719	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGAGTGCCTGTGACTTC	-16	True	NA	NA	False	NA	NA	NA	14690055	14699411	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_14690151_14693450_14693495_14695009_14695134_14695565_14695662_14699198
H1_mix_00046611	chr19	+	1569	11	FSM	ENSG00000160961.12	ENST00000597301.5	1569	11	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_10	9.80866963456309	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAAACTCTATAAATAT	34	False	NA	NA	False	NA	NA	NA	14690105	14718243	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_14690151_14693450_14693495_14695009_14695134_14695565_14695662_14699198_14699282_14705053_14705171_14706685_14706774_14715381_14715471_14716111_14716239_14716993_14717734_14718227
H1_mix_00046613	chr19	+	462	1	FSM	ENSG00000268189.2	ENST00000597549.1	1771	1	25	1284	25	-1284	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCGCGCGCGCCCTGGCCG	833	False	NA	NA	False	NA	NA	NA	15379100	15379562	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_15379100_15379600
H1_mix_00046614	chr19	+	2504	9	FSM	ENSG00000167460.17	ENST00000643494.1	2504	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	1301.68044633658	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTACATTTTGGTCAAATA	10	True	NA	-26	True	NA	NA	NA	16076520	16102965	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_16076698_16081912_16082047_16086422_16086541_16088026_16088098_16089044_16089121_16093039_16093133_16093535_16093599_16093683_16093754_16101263
H1_mix_00046615	chr19	+	3781	8	FSM	ENSG00000167460.17	ENST00000344824.11	2359	8	-650	-772	0	0	multi-exon	FALSE	canonical	3	11	junction_1	1041.33742497476	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTAGATTCTTGCAACTG	1834	False	NA	-4	True	AATAAA	-7	NA	16078851	16102921	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_16080443_16081912_16082047_16086422_16086541_16088026_16088098_16089044_16089121_16093535_16093599_16093683_16093754_16101263
H1_mix_00046617	chr19	+	2675	1	FSM	ENSG00000167460.17	ENST00000591226.2	2675	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAAAATAAAGTTG	NA	False	NA	-20	True	NA	NA	NA	16099666	16102341	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_16099700_16102300
H1_mix_00046619	chr19	+	640	4	FSM	ENSG00000072958.9	ENST00000589991.1	625	4	-15	0	-13	0	multi-exon	FALSE	canonical	3	385	junction_1	19.6468827043885	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCACCTCCAGCAGTATT	44	False	NA	NA	False	NA	NA	NA	16197897	16208262	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_16198069_16203458_16203616_16206340_16206409_16208018
H1_mix_00046620	chr19	+	1591	11	FSM	ENSG00000072958.9	ENST00000429941.6	1578	11	-13	0	-13	0	multi-exon	FALSE	canonical	3	14	junction_8	121.541926922359	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGCATCTGCCACGAAGG	44	False	NA	NA	False	AAAAAG	-33	NA	16197897	16234784	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_16198069_16203458_16203616_16206340_16206409_16208018_16208150_16209029_16209178_16226420_16226548_16227547_16227691_16228136_16228209_16233492_16233619_16234198_16234275_16234412
H1_mix_00046623	chr19	+	2590	8	FSM	ENSG00000105072.9	ENST00000594035.5	2609	8	19	0	7	0	multi-exon	FALSE	canonical	2	3	junction_5	8.40796512546409	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAAAGTTTTGTGTTTCTG	5	True	NA	15	True	AGTAAA	-32	NA	16496412	16518619	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_16496466_16500791_16501552_16503064_16503381_16506700_16506775_16509498_16509989_16514496_16514664_16517229_16517342_16518001
H1_mix_00046628	chr19	+	7849	40	NIC	ENSG00000099331.14	novel	7595	40	NA	NA	-38	0	intron_retention	FALSE	canonical	3	21	junction_15	47.2794926723038	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGTGCATGGGACGCC	-2	True	NA	10	True	AATAAA	-12	NA	17075738	17213284	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_17075875_17101659_17102558_17145396_17145492_17152643_17152707_17153966_17154067_17154314_17154416_17156908_17157039_17159394_17159485_17162349_17162467_17162987_17163123_17167942_17168065_17172335_17172478_17172758_17172964_17175662_17175742_17177796_17177887_17180926_17181041_17183828_17183869_17184864_17184988_17185920_17186002_17187934_17188046_17191096_17191220_17192745_17193063_17194555_17195474_17197791_17197859_17198183_17198309_17200292_17200427_17200638_17200830_17201925_17202025_17202129_17202304_17202844_17202884_17203146_17203259_17205262_17205337_17205959_17206153_17206247_17206377_17206678_17206785_17207112_17207245_17209585_17209710_17210332_17210381_17210714_17210853_17211650
H1_mix_00046629	chr19	+	7575	40	NIC	ENSG00000099331.14	novel	7595	40	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	3	8	junction_15	51.2523247175641	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGAAGTGTGTGCATGGG	-21	True	NA	5	True	AATAAA	-7	NA	17075776	17213279	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_17075875_17101659_17102558_17145396_17145492_17152643_17152707_17153966_17154067_17154314_17154416_17156908_17157039_17159394_17159485_17162349_17162467_17162987_17163123_17167942_17168065_17172335_17172478_17172758_17172964_17175662_17175742_17177796_17177887_17183828_17183869_17184864_17184988_17185920_17186002_17187934_17188046_17191096_17191220_17192745_17193063_17194555_17195474_17197791_17197859_17198183_17198309_17200292_17200427_17200638_17200830_17201925_17202025_17202129_17202304_17202841_17202884_17203146_17203259_17205262_17205337_17205959_17206153_17206247_17206377_17206678_17206785_17207112_17207245_17209585_17209710_17210332_17210381_17210714_17210853_17211650_17211775_17211894
H1_mix_00046632	chr19	+	579	4	FSM	ENSG00000053501.14	ENST00000601592.5	575	4	-4	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	20.6074420214316	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGGCCAGCTGACTAGGA	-7	True	NA	NA	False	NA	NA	NA	17215387	17217489	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17215508_17215801_17216071_17216168_17216322_17217452
H1_mix_00046633	chr19	+	1800	5	FSM	ENSG00000053501.14	ENST00000595101.5	1776	5	-24	0	7	0	multi-exon	FALSE	canonical	3	58	junction_4	22.8623598956888	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	13	True	NA	NA	False	NA	NA	NA	17215363	17218826	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17215508_17215801_17215852_17215991_17216071_17216168_17216322_17217452
H1_mix_00046634	chr19	+	579	7	FSM	ENSG00000053501.14	ENST00000593597.1	587	7	8	0	8	0	multi-exon	FALSE	canonical	0	0	junction_4	38.8647941229877	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCACTGAAAATGGCGGAC	-11	True	NA	NA	False	NA	NA	NA	17215727	17219640	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17215852_17215991_17216071_17216168_17216322_17217452_17217463_17218363_17218392_17219212_17219388_17219630
H1_mix_00046635	chr19	+	1048	3	NIC	ENSG00000099330.9	novel	942	5	NA	NA	4	0	intron_retention	FALSE	canonical	3	19	junction_1	54.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACTGAGTATAATTACTT	-6	True	NA	6	True	AATAAA	-14	NA	17226618	17229215	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_17227200_17228255_17228310_17228802
H1_mix_00046636	chr19	+	1265	5	FSM	ENSG00000099330.9	ENST00000598172.1	752	5	0	-513	0	0	multi-exon	FALSE	canonical	0	0	junction_4	57.1768091099879	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGAGTATAATTACTTAAC	168	False	NA	9	True	AATAAA	-17	NA	17226838	17229218	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17226870_17226993_17227200_17227839_17228006_17228255_17228310_17228410
H1_mix_00046640	chr19	+	1471	4	FSM	ENSG00000105393.16	ENST00000595393.5	1471	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	472.861031969812	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGACCTCGCTGCACCCTC	-5	True	NA	NA	False	NA	NA	NA	17267442	17277523	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17267528_17268793_17269092_17271596_17271656_17276494
H1_mix_00046641	chr19	+	596	5	FSM	ENSG00000105393.16	ENST00000448635.2	589	5	-7	0	0	0	multi-exon	FALSE	canonical	3	42	junction_4	449.0998636161	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCGCACCATCCTTGTCTA	-6	True	NA	NA	False	NA	NA	NA	17267470	17276555	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17267528_17268793_17269092_17271596_17271656_17273903_17274025_17276494
H1_mix_00046642	chr19	+	1078	4	NNC	ENSG00000130312.7	novel	863	3	NA	NA	0	29417	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	281.193093008266	329	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTGGGCAACGTAGTGAG	-3	True	NA	NA	False	NA	NA	NA	17292608	17336260	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_17292855_17305830_17305958_17306165_17306843_17336232
H1_mix_00046643	chr19	+	786	3	NNC	ENSG00000130312.7	novel	764	2	NA	NA	0	29417	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	314	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTGGGCAACGTAGTGAG	18	True	NA	NA	False	NA	NA	NA	17305871	17336260	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_17305958_17306165_17306839_17336233
H1_mix_00046644	chr19	+	1066	5	NNC	ENSG00000130311.11	novel	4043	5	NA	NA	13	-74	intron_retention	FALSE	canonical	2	21	junction_1	253.768964808544	38	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTCGCGTCTTTGCTCCA	3062	False	NA	16	True	AATAAA	-17	NA	17309530	17320293	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_17309658_17314026_17314104_17314337_17314390_17315933_17315996_17319545
H1_mix_00046648	chr19	+	1953	8	FSM	ENSG00000130299.17	ENST00000358792.11	1951	8	-2	0	0	0	multi-exon	FALSE	canonical	1	43	junction_4	73.2557722180669	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGGTGATCTAGAAGTGT	-16	True	NA	NA	False	NA	NA	NA	17337552	17342022	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17337665_17338007_17338256_17338364_17338452_17338538_17338742_17338953_17339267_17339433_17339600_17341043_17341323_17341477
H1_mix_00046654	chr19	+	1757	3	FSM	ENSG00000282851.2	ENST00000635060.2	1831	3	60	14	0	-14	multi-exon	FALSE	canonical	2	3	junction_2	1	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCGGCTTAAATAAAGGACT	18	False	NA	-17	True	NA	NA	NA	17405762	17415702	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17405988_17406076_17406297_17414390
H1_mix_00046658	chr19	+	869	4	FSM	ENSG00000130313.7	ENST00000598811.1	869	4	0	0	0	0	multi-exon	FALSE	canonical	3	424	junction_3	26.0810701893581	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGCCGCCCGCCTCCTGAC	3893	False	NA	NA	False	NA	NA	NA	17515741	17521030	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17516281_17517287_17517390_17517709_17517851_17520943
H1_mix_00046659	chr19	+	641	5	FSM	ENSG00000130309.12	ENST00000597075.1	737	5	32	64	32	0	multi-exon	FALSE	canonical	3	208	junction_1	24.5700529099959	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCTGCAAGGCGCCCGCA	8487	False	NA	NA	False	NA	NA	NA	17577106	17580806	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17577272_17577360_17577468_17577956_17578090_17579481_17579610_17580698
H1_mix_00046663	chr19	+	907	2	FSM	ENSG00000105640.13	ENST00000602216.1	907	2	0	0	0	0	multi-exon	FALSE	canonical	3	16288	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGAATACCGGGACCTGAC	31	False	NA	NA	False	NA	NA	NA	17859952	17862177	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17859975_17861292
H1_mix_00046664	chr19	+	580	3	FSM	ENSG00000007080.11	ENST00000596123.1	580	3	0	0	0	0	multi-exon	FALSE	canonical	3	1743	junction_2	97.5	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGAGGGCAGCGTGGAGG	1158	False	NA	NA	False	NA	NA	NA	17936250	17943321	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17936580_17942655_17942846_17943260
H1_mix_00046665	chr19	+	1426	7	FSM	ENSG00000105642.16	ENST00000609922.2	1426	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	13.4958841462458	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGACCGCGGTTCCCAT	6	True	NA	NA	False	NA	NA	NA	17952284	17988525	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17952339_17954560_17954682_17973807_17974291_17975091_17975188_17981708_17982128_17985311_17985454_17988414
H1_mix_00046666	chr19	+	3582	9	NIC	ENSG00000105642.16	novel	3603	10	NA	NA	-11	1	combination_of_known_junctions	FALSE	canonical	2	18	junction_7	10.3531396204243	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGGCAGGACTCATCCT	15	True	NA	19	True	AATAAA	-33	NA	17967119	18000086	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_17967318_17973807_17974291_17975091_17975188_17981708_17982128_17985311_17985454_17988414_17988526_17989715_17989844_17993489_17993560_17998151
H1_mix_00046667	chr19	+	1120	4	FSM	ENSG00000105643.11	ENST00000593560.6	1109	4	-11	0	-11	0	multi-exon	FALSE	canonical	3	37	junction_1	6.84754619472471	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTCAAGGTAGGGCATCC	917	False	NA	NA	False	NA	NA	NA	18008156	18010030	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18008778_18008970_18009119_18009591_18009695_18009782
H1_mix_00046668	chr19	+	3761	2	FSM	ENSG00000105643.11	ENST00000593460.1	3748	2	-13	0	-11	0	multi-exon	FALSE	canonical	3	43	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCGGGCTTCTTGGTTTA	917	False	NA	7	True	AGTAAA	-14	NA	18008156	18014100	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18010730_18012912
H1_mix_00046669	chr19	+	2558	8	FSM	ENSG00000105643.11	ENST00000222250.5	2501	8	-59	2	-57	0	multi-exon	TRUE	canonical	1	2	junction_1	15.2770335831941	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCGGGCTTCTTGGTTTA	871	False	NA	7	True	AGTAAA	-14	NA	18008110	18014100	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18008585_18008710_18008778_18008970_18009119_18009591_18009695_18009782_18010040_18010195_18010359_18010571_18010730_18012912
H1_mix_00046670	chr19	+	566	3	FSM	ENSG00000105643.11	ENST00000594411.1	566	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	4	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCTCCCACCCTGCTTG	1024	False	NA	NA	False	NA	NA	NA	18009548	18010358	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18009695_18009782_18010040_18010195
H1_mix_00046671	chr19	+	2875	1	FSM	ENSG00000273654.1	ENST00000614660.1	1401	1	-68	-1406	-68	1336	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCTCAAAGCAATAGTGTT	42	False	NA	NA	False	AATAAA	-27	NA	18030560	18033435	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18030600_18033400
H1_mix_00046672	chr19	+	3796	15	FSM	ENSG00000105647.19	ENST00000617130.5	3796	15	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_10	255.443362067778	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTGATTCTGTTGTCAG	-30	True	NA	21	True	TATAAA	-13	NA	18153178	18170532	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18153295_18155456_18156202_18160470_18160564_18160918_18160970_18161053_18161186_18161965_18162052_18162201_18162311_18162407_18162507_18162966_18163148_18163262_18163389_18166110_18166303_18167129_18167307_18168474_18168547_18168725_18168897_18169086
H1_mix_00046675	chr19	+	741	6	FSM	ENSG00000105647.19	ENST00000672815.1	741	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	296.134023712237	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCAGAGGAGATGCTGAGT	2263	False	NA	NA	False	NA	NA	NA	18163144	18168808	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18163148_18163262_18163389_18166022_18166303_18167129_18167307_18168474_18168547_18168725
H1_mix_00046676	chr19	+	879	2	FSM	ENSG00000105647.19	ENST00000674682.1	879	2	0	0	0	0	multi-exon	FALSE	canonical	3	699	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAATCCCAGTTACTCAAG	5153	False	NA	NA	False	AATAAA	-37	NA	18166034	18167740	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18166303_18167129
H1_mix_00046677	chr19	+	569	2	FSM	ENSG00000254858.10	ENST00000534421.1	548	2	-21	0	-21	0	multi-exon	FALSE	canonical	3	389	junction_1	0	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAGGTCACAGCGGGGAC	NA	False	NA	NA	False	NA	NA	NA	18193196	18194160	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18193469_18193863
H1_mix_00046678	chr19	+	1941	4	FSM	ENSG00000254858.10	ENST00000533807.3	1941	4	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_2	7.25718035235908	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCCCCACCAAAAGAGAAAA	-5	True	NA	NA	False	NA	NA	NA	18193249	18196948	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18194035_18194776_18194854_18194957_18195087_18195998
H1_mix_00046679	chr19	+	424	3	FSM	ENSG00000268650.3	ENST00000599416.2	415	3	-9	0	-5	0	multi-exon	FALSE	canonical	0	0	junction_1	0	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTGGTGCATAGGTTCAA	4341	False	NA	NA	False	AATAAA	-15	NA	18204724	18209046	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18204900_18208289_18208430_18208937
H1_mix_00046680	chr19	+	1424	4	FSM	ENSG00000130517.14	ENST00000252813.5	1409	4	-15	0	-4	0	multi-exon	FALSE	canonical	1	1	junction_1	9.41629792788369	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTCATGCCTGTAATCC	-6	True	NA	NA	False	NA	NA	NA	18340593	18364342	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18340716_18355894_18356012_18357382_18357616_18363390
H1_mix_00046685	chr19	+	341	2	FSM	ENSG00000105700.11	ENST00000596244.1	341	2	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCTCGAGGGTCTTCTGC	950	False	NA	NA	False	NA	NA	NA	18558826	18562072	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18559131_18562035
H1_mix_00046688	chr19	+	2277	3	FSM	ENSG00000006015.18	ENST00000600997.5	2275	3	-2	0	0	0	multi-exon	FALSE	canonical	3	562	junction_2	24	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGCTCTGCCATCTCTGT	-6	True	NA	14	True	AATAAA	-16	NA	18588795	18592336	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18588901_18588994_18589684_18590853
H1_mix_00046689	chr19	+	403	4	FSM	ENSG00000105696.9	ENST00000594709.1	403	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	21.7460085737335	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGTGACCGCGCCTGGC	3026	False	NA	NA	False	NA	NA	NA	18615975	18618454	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18616128_18616999_18617103_18618154_18618223_18618374
H1_mix_00046690	chr19	+	561	4	FSM	ENSG00000005007.13	ENST00000601689.1	561	4	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_2	17.2497987105808	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCTGATCCAGGGCCCG	131	False	NA	NA	False	NA	NA	NA	18852997	18855157	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18853072_18853251_18853351_18854600_18854710_18854878
H1_mix_00046691	chr19	+	3825	9	FSM	ENSG00000005007.13	ENST00000596842.5	3825	9	0	0	0	0	multi-exon	TRUE	canonical	3	308	junction_4	34.9300640566261	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACCAAGGTTGGATAAACT	6516	False	NA	17	True	AATAAA	-14	NA	18859382	18868229	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18860439_18860825_18860983_18862009_18862153_18863437_18863613_18864169_18864252_18865288_18865451_18865560_18865779_18866043_18866167_18866520
H1_mix_00046692	chr19	+	581	4	FSM	ENSG00000105676.14	ENST00000536098.5	563	4	-18	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	217.392629947649	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTCCAGGAGTCTGTGG	-10	True	NA	NA	False	NA	NA	NA	19033602	19051629	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19033931_19042715_19042878_19043991_19044075_19051621
H1_mix_00046694	chr19	+	1378	10	FSM	ENSG00000064490.14	ENST00000303088.9	1376	10	-2	0	-2	0	multi-exon	FALSE	canonical	3	73	junction_1	102.301056557787	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGACTTTGCTGTGCTT	1	True	NA	22	True	AATAAA	-15	NA	19192255	19201866	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19192555_19192959_19193101_19193938_19194134_19196962_19197047_19197185_19197252_19197520_19197622_19198106_19198233_19198656_19198724_19199153_19199235_19201648
H1_mix_00046696	chr19	+	3913	11	ISM	ENSG00000130287.14	ENST00000252575.11	6402	15	-12	13444	-12	-3	5prime_fragment	FALSE	canonical	3	17	junction_7	8.8068155425216	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAACAGATCCTATGTGTG	NA	False	NA	10	True	AGTAAA	-29	NA	19211945	19238789	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_19212065_19216946_19217027_19218914_19219317_19224020_19224196_19224305_19224434_19224976_19225271_19226485_19227074_19227280_19228640_19233788_19233906_19234982_19235097_19238252
H1_mix_00046697	chr19	+	558	4	FSM	ENSG00000129933.21	ENST00000592069.1	558	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	78.0555357848927	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTCACAGCAGACCCCAT	1821	False	NA	NA	False	NA	NA	NA	19334172	19337213	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19334603_19335717_19335736_19336121_19336188_19337169
H1_mix_00046698	chr19	+	561	3	FSM	ENSG00000129933.21	ENST00000590837.8	561	3	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCAGTTTGGGAGGCCGA	NA	False	NA	NA	False	NA	NA	NA	19342534	19344159	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19342682_19342775_19342867_19343836
H1_mix_00046701	chr19	+	3717	12	FSM	ENSG00000167491.18	ENST00000360315.7	5671	12	0	1954	0	-364	multi-exon	FALSE	canonical	3	28	junction_8	216.774400001171	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTCCTGTCGTGTGAAT	-1	True	NA	4	True	AATAAA	-16	NA	19385832	19506977	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19386139_19465339_19465615_19492305_19492439_19492580_19492713_19494293_19494384_19495753_19495886_19496051_19496220_19498442_19498723_19501120_19501417_19501968_19502044_19502330_19502527_19505343
H1_mix_00046702	chr19	+	1166	5	FSM	ENSG00000186010.19	ENST00000502506.6	1166	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	3695.07510072529	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGTTTTCCTGGGG	-8	True	NA	22	True	AATAAA	-16	NA	19515735	19528197	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19516333_19526024_19526261_19527280_19527353_19527700_19527771_19528006
H1_mix_00046704	chr19	+	4216	8	FSM	ENSG00000160161.9	ENST00000586018.5	4234	8	17	1	0	-1	multi-exon	FALSE	canonical	2	2	junction_2	19.5521281267721	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCATGGTGTCAGGCTCTA	-15	True	NA	26	True	ATTAAA	-16	NA	19538264	19546658	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19538414_19539678_19539778_19540185_19540477_19541090_19541247_19542374_19542651_19542863_19542973_19543247_19543406_19543680
H1_mix_00046706	chr19	+	654	3	NNC	ENSG00000267419.3	novel	606	3	NA	NA	-5	5499	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	7.5	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTTCTGAAAGATTTT	4	True	NA	23	True	AATAAA	-19	NA	19776596	19793606	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_19776995_19786608_19786692_19793433
H1_mix_00046708	chr19	+	8453	6	NNC	ENSG00000213988.11	novel	1918	6	NA	NA	-21	-11	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_3	111.368577255885	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATAAATTATGACATGTAA	-20	True	NA	-6	True	TTTAAA	-1	NA	20077972	20127007	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_20078136_20104238_20104366_20105220_20105317_20114696_20121347_20125005_20126167_20126751
H1_mix_00046711	chr19	+	313	1	FSM	ENSG00000270716.1	ENST00000604600.1	301	1	47	-59	47	59	mono-exon	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCTCCTTTCCACGGTC	NA	False	NA	NA	False	AAAAAG	-36	NA	20136979	20137292	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_20137000_20137300
H1_mix_00046712	chr19	+	2281	4	NNC	ENSG00000256229.8	novel	3895	4	NA	NA	-365	1863	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	49.9355139710763	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCAAAGTGTTAGGGTTA	NA	False	NA	NA	False	NA	NA	NA	20166848	20190639	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_20167361_20184355_20184483_20185986_20186083_20189093
H1_mix_00046715	chr19	+	1911	1	FSM	ENSG00000268174.1	ENST00000593399.1	556	1	-862	-493	-862	493	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGGGTCACCTGGGTCAA	NA	False	NA	NA	False	NA	NA	NA	20415651	20417562	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_20415700_20417600
H1_mix_00046716	chr19	+	1981	4	FSM	ENSG00000118620.13	ENST00000595401.1	3021	4	0	1040	0	-1040	multi-exon	FALSE	canonical	3	18	junction_3	13.9602610609146	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCACCTTTAGTTGGCTT	30	False	NA	NA	False	NA	NA	NA	21020716	21035762	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_21020804_21022788_21022882_21033455_21033583_21034088
H1_mix_00046717	chr19	+	801	5	FSM	ENSG00000160352.16	ENST00000596053.5	800	5	-1	0	-1	0	multi-exon	FALSE	canonical	2	12	junction_4	34.5036229981722	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTAAAAATAATATTCTG	28	False	NA	NA	False	NA	NA	NA	21082172	21125270	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_21082349_21083977_21084070_21098184_21098312_21098814_21098911_21124960
H1_mix_00046718	chr19	+	4278	6	NIC	ENSG00000160352.16	novel	2696	7	NA	NA	0	1475	combination_of_known_junctions	FALSE	canonical	3	60	junction_5	16.2406896405294	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTTGTTGTTGTTTCAA	15	False	NA	19	True	AATAAA	-19	NA	21082249	21126745	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_21082349_21083977_21084070_21098184_21098312_21098814_21098911_21116806_21118886_21124960
H1_mix_00046719	chr19	+	13913	5	FSM	ENSG00000196705.8	ENST00000311048.11	13894	5	-19	0	-3	0	multi-exon	FALSE	canonical	3	23	junction_4	24.1764348074732	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAATGGTGTGTGTGTGTG	NA	False	NA	NA	False	TATAAA	-16	NA	21142020	21196053	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_21142187_21143550_21143644_21166334_21166462_21167570_21167667_21182622
H1_mix_00046724	chr19	+	744	1	FSM	ENSG00000196268.12	ENST00000599517.1	2660	1	1917	-1	1917	1	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATCGTAACTGAGCATT	NA	False	NA	9	True	AATAAA	-22	NA	21413856	21414600	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_21413900_21414600
H1_mix_00046726	chr19	+	5626	4	FSM	ENSG00000183850.14	ENST00000597761.7	2326	4	-555	-2745	-555	2745	multi-exon	FALSE	canonical	3	34	junction_1	28.3117564901148	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTGTGTGATATAAACTC	NA	False	NA	NA	False	AATAAA	-20	NA	23116469	23149966	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_23117177_23134079_23134207_23135947_23136044_23145270
H1_mix_00046728	chr19	+	1205	2	NIC	ENSG00000288920.1	novel	2140	4	NA	NA	0	-734	combination_of_known_splicesites	FALSE	canonical	1	6	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTGCAATAATTATGAGT	-4	True	NA	5	True	AATAAA	-31	NA	23762994	23828134	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_23763135_23827069
H1_mix_00046729	chr19	+	1728	4	FSM	ENSG00000288920.1	ENST00000484897.4	2140	4	12	400	5	-400	multi-exon	FALSE	canonical	3	24	junction_3	40.7948798530186	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTCTGCAATATTAAGTA	17	True	NA	NA	False	ATTAAA	-25	NA	23763015	23828468	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_23763135_23807825_23807940_23808718_23808815_23827069
H1_mix_00046730	chr19	+	1030	3	ISM	ENSG00000288920.1	ENST00000484897.4	2140	4	12	19353	5	0	5prime_fragment	FALSE	canonical	3	109	junction_2	1.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTCCTCTAATTTTTT	17	True	NA	9	True	AATAAA	-16	NA	23763015	23809515	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_23763135_23807825_23807940_23808718
H1_mix_00046732	chr19	+	6211	4	ISM	ENSG00000268362.6	ENST00000669127.1	1062	5	-45	3278	0	-1317	5prime_fragment	FALSE	canonical	3	12	junction_1	15.8394724940223	2255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAAACCCCATCTCTACT	-4	True	NA	NA	False	NA	NA	NA	24033400	24055018	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_24033622_24042442_24042723_24046183_24046280_24049404
H1_mix_00046734	chr19	+	1925	5	FSM	ENSG00000268362.6	ENST00000653003.1	1911	5	-14	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	36.5675744341896	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCAGGTGTGGTGATTG	-4	True	NA	NA	False	AATAAA	-11	NA	24033400	24066750	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_24033622_24046183_24046280_24049404_24049549_24057930_24058107_24065462
H1_mix_00046735	chr19	+	928	3	FSM	ENSG00000268362.6	ENST00000656966.1	928	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACTTTAGAAAACTTTTG	22	True	NA	NA	False	AATAAA	-30	NA	24033483	24037405	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_24033622_24036252_24036383_24036745
H1_mix_00046736	chr19	+	970	7	NIC	ENSG00000268362.6	novel	2009	7	NA	NA	-1	49103	combination_of_known_splicesites	FALSE	canonical	3	33	junction_3	36.6170118326927	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCTTCTATAAATTTTT	-42	True	NA	NA	False	GATAAA	-7	NA	24033419	24126480	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_24033622_24046183_24046280_24048936_24049015_24049404_24049549_24105939_24106067_24106547_24106644_24126253
H1_mix_00046737	chr19	+	587	4	NIC	ENSG00000268362.6	novel	1929	4	NA	NA	-1	49114	combination_of_known_splicesites	FALSE	canonical	1	7	junction_3	38.0905354240248	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATTTTTAAATTCAAACA	51	False	NA	NA	False	GATAAA	-18	NA	24033512	24126491	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_24033622_24046183_24046280_24049404_24049549_24126253
H1_mix_00046739	chr19	+	2386	1	FSM	ENSG00000279425.1	ENST00000623742.1	2189	1	29	-226	29	226	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAAACCCCATCTCTAGT	NA	False	NA	NA	False	NA	NA	NA	24078509	24080895	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_24078500_24080900
H1_mix_00046740	chr19	+	4122	5	FSM	ENSG00000213096.11	ENST00000594886.5	792	5	-23	-3307	-7	-109	multi-exon	FALSE	canonical	1	4	junction_1	57.5043476617203	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTTCTTTGAATATG	-5	True	NA	66	True	AATAAA	-19	NA	24087152	24129852	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_24087338_24091900_24092016_24105939_24106067_24106547_24106644_24126253
H1_mix_00046742	chr19	+	1817	3	FSM	ENSG00000267575.8	ENST00000592404.6	1796	3	-21	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	1	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTTAGTATAACTATAAA	8379	False	NA	NA	False	AATAGA	-11	NA	27793430	27800391	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_27793651_27797753_27798177_27799217
H1_mix_00046743	chr19	+	1780	3	FSM	ENSG00000267575.8	ENST00000659857.2	1764	3	-16	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	2.5	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGATGTGTTGGCTTGTAA	8379	False	NA	NA	False	AATAAA	-21	NA	27793430	27806782	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_27793610_27797753_27798177_27805604
H1_mix_00046744	chr19	+	656	2	FSM	ENSG00000267575.8	ENST00000586784.1	656	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGCAAAAAAAAAAAAAAAAA	6	True	NA	NA	False	NA	NA	NA	27793482	27798282	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_27793610_27797753
H1_mix_00046748	chr19	+	541	1	FSM	ENSG00000267264.1	ENST00000586818.1	523	1	37	-55	37	55	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATACATATAATTACATTCA	9544	False	NA	NA	False	NA	NA	NA	27803574	27804115	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_27803600_27804100
H1_mix_00046752	chr19	+	1799	11	NIC	ENSG00000105173.14	novel	1954	12	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_8	100.339623280138	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGCTGGTTTTATGAGCT	26	True	NA	17	True	AATAAA	-18	NA	29812006	29824308	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_29812153_29812531_29812579_29812688_29812777_29812968_29813038_29817136_29817283_29817405_29817542_29820701_29820849_29821721_29821818_29822239_29822352_29822445_29822604_29823654
H1_mix_00046754	chr19	+	455	2	Intergenic	novelGene_640	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	0	415	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTACGAAGCAAAGAATGCC	NA	False	NA	-8	True	AATAAA	-2	NA	31420115	31421185	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_31420496_31421110
H1_mix_00046756	chr19	+	7710	6	FSM	ENSG00000168813.17	ENST00000311921.8	7638	6	16	-88	0	88	multi-exon	FALSE	canonical	3	13	junction_1	30.6920185064456	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGATTAGCAAACTAGGGC	-10	True	NA	NA	False	NA	NA	NA	32345609	32387755	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_32345784_32352828_32354958_32356615_32356734_32360503_32360619_32382466_32382602_32382716
H1_mix_00046757	chr19	+	6015	19	FSM	ENSG00000178904.19	ENST00000342179.9	6015	19	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	17.1949605020386	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGATGAGTGTCTTGCAT	0	True	NA	NA	False	AGTAAA	-16	NA	32406124	32485889	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_32406303_32408216_32408357_32411238_32411373_32432715_32432807_32436445_32436568_32437193_32437340_32439111_32439236_32439775_32439911_32453144_32453277_32454938_32455041_32458099_32458174_32458350_32458510_32463365_32463489_32463868_32463981_32464727_32464785_32468730_32468814_32477521_32477655_32480398_32480558_32482078
H1_mix_00046759	chr19	+	7073	4	NNC	ENSG00000178904.19	novel	546	3	NA	NA	-6681	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	38.7843038125248	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAAGATGAGTGTCTTGC	NA	False	NA	NA	False	AGTAAA	-14	NA	32470801	32485887	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_32473774_32477521_32477655_32480398_32480558_32482078
H1_mix_00046761	chr19	+	1810	4	FSM	ENSG00000105185.12	ENST00000419343.7	1799	4	-11	0	0	0	multi-exon	FALSE	canonical	3	1845	junction_1	97.5602378020882	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCCTTTTAAAAAAATAAAC	-26	True	NA	-22	True	NA	NA	NA	32581189	32587387	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_32581328_32582194_32582233_32584949_32585012_32585815
H1_mix_00046762	chr19	+	468	5	FSM	ENSG00000105185.12	ENST00000592786.5	468	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	853.497913002721	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAAGTGGCCAGATCTGT	16	True	NA	43	True	AATAAA	-29	NA	32581231	32587452	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_32581328_32582194_32582233_32584949_32585012_32586857_32586930_32587252
H1_mix_00046763	chr19	+	3144	3	FSM	ENSG00000213965.4	ENST00000397061.4	3103	3	-42	1	-42	-1	multi-exon	FALSE	canonical	2	4	junction_1	1.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCCAGATTAGAGAACTATA	NA	False	NA	NA	False	AATAAA	-19	NA	32691778	32713791	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_32692675_32709184_32709393_32711751
H1_mix_00046764	chr19	+	1396	1	ISM	ENSG00000213965.4	ENST00000397061.4	3103	3	20576	0	20576	0	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAGATTAGAGAACTATAT	NA	False	NA	NA	False	AATAAA	-20	NA	32712396	32713792	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_32712400_32713800
H1_mix_00046766	chr19	+	513	3	FSM	ENSG00000076650.7	ENST00000590062.1	513	3	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	0	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATACTCATATAAATTCTT	NA	False	NA	NA	False	ATTAAA	-16	NA	33109876	33112679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_33110017_33111723_33111903_33112485
H1_mix_00046767	chr19	+	2318	1	FSM	ENSG00000267296.2	ENST00000592982.2	2198	1	26	-146	26	146	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGCATCCAGCCTCCAGA	51	False	NA	-49	True	NA	NA	NA	33302882	33305200	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_33302900_33305200
H1_mix_00046769	chr19	+	601	3	FSM	ENSG00000166398.14	ENST00000589583.5	582	3	-19	0	8	0	multi-exon	FALSE	canonical	1	2	junction_2	43.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCGATGCCTGAGCTGGGC	-6	True	NA	NA	False	NA	NA	NA	34254561	34300567	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_34254615_34299678_34299924_34300264
H1_mix_00046775	chr19	+	353	3	FSM	ENSG00000126261.13	ENST00000592672.2	353	3	0	0	0	0	multi-exon	FALSE	canonical	3	835	junction_1	7	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGGCAAAGTACTTGTT	4489	False	NA	NA	False	NA	NA	NA	34433259	34438743	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_34433413_34434867_34434969_34438644
H1_mix_00046777	chr19	+	661	5	FSM	ENSG00000089335.22	ENST00000506901.5	675	5	14	0	6	0	multi-exon	FALSE	canonical	2	4	junction_1	94.2745326161843	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-21	True	NA	NA	False	NA	NA	NA	34677667	34684172	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_34677863_34678736_34678814_34682776_34682898_34683151_34683239_34683991
H1_mix_00046778	chr19	+	3494	4	NIC	ENSG00000089335.22	novel	2893	5	NA	NA	6	0	intron_retention	FALSE	canonical	3	182	junction_3	23.6784008469041	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTTTCTCTGTGACTGT	-21	True	NA	27	True	AATAAA	-37	NA	34677667	34686394	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_34678814_34682776_34682898_34683154_34683239_34684251
H1_mix_00046781	chr19	+	499	4	FSM	ENSG00000197841.15	ENST00000599244.5	499	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	16.391054470859	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAGTCATGGTGAACGAG	NA	False	NA	NA	False	NA	NA	NA	34734154	34739620	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_34734361_34734969_34735047_34739147_34739269_34739525
H1_mix_00046782	chr19	+	2659	5	NIC	ENSG00000197841.15	novel	498	5	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_3	18.0138835346518	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTCACTGTGACTATTT	17	True	NA	24	True	AATAAA	-40	NA	34734260	34742872	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_34734361_34734969_34735047_34739147_34739269_34739522_34739622_34740610
H1_mix_00046783	chr19	+	2628	5	FSM	ENSG00000168661.15	ENST00000439785.5	2651	5	23	0	16	0	multi-exon	FALSE	canonical	3	10	junction_3	10.4013220313574	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGCTGAACTTCAAATAAT	9	True	NA	8	True	AATAAA	-22	NA	34926925	34945170	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_34927283_34929883_34929957_34931842_34931994_34933624_34933724_34943222
H1_mix_00046784	chr19	+	2507	17	NIC	ENSG00000089351.15	novel	2647	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	40	junction_2	315.579204598465	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGCTGTGCCTGTGGG	18	True	NA	13	True	AATAAA	-13	NA	35000322	35026469	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_35000487_35009118_35009330_35009887_35009973_35010091_35010196_35010283_35010380_35011473_35011555_35013255_35013369_35013540_35013692_35014188_35014388_35015823_35015968_35019390_35019534_35021501_35021606_35021690_35021865_35021950_35022039_35023235_35023344_35023426_35023548_35026048
H1_mix_00046787	chr19	+	3457	2	FSM	ENSG00000105711.14	ENST00000602150.2	3461	2	0	4	0	-4	multi-exon	FALSE	canonical	3	26	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGCATAGTTTCGATTG	5628	False	NA	12	True	AATAAA	-12	NA	35036898	35040445	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35039707_35039796
H1_mix_00046788	chr19	+	1633	12	NIC	ENSG00000105707.15	novel	1783	14	NA	NA	-4	0	combination_of_known_splicesites	TRUE	canonical	3	29	junction_1	32.2830969255962	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGGCCTCCGAGCTTAC	21	True	NA	19	True	AATAAA	-14	NA	35041761	35066571	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_35041873_35049289_35049392_35049474_35049517_35059672_35059803_35059873_35059997_35060128_35060170_35060346_35060513_35060626_35060818_35065249_35065346_35065538_35065682_35065867_35066033_35066248
H1_mix_00046789	chr19	+	477	8	FSM	ENSG00000266964.6	ENST00000351325.9	576	8	44	55	27	0	multi-exon	FALSE	canonical	1	1	junction_1	88.5919331104413	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGTCGGTCTCGGTCCC	17	False	NA	25	True	AATAAA	-22	NA	35138867	35143054	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35138895_35140075_35140141_35140596_35140630_35141131_35141207_35141535_35141573_35142471_35142522_35142719_35142772_35142916
H1_mix_00046791	chr19	+	568	6	FSM	ENSG00000221946.8	ENST00000586063.5	456	6	-23	-89	-23	0	multi-exon	FALSE	canonical	3	22	junction_4	56.1640454383407	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCCTGGGATCCGGGAGT	-4	True	NA	NA	False	NA	NA	NA	35143226	35154143	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35143365_35148693_35148724_35151253_35151329_35151439_35151474_35151632_35151674_35153893
H1_mix_00046792	chr19	+	660	5	FSM	ENSG00000221946.8	ENST00000588265.1	636	5	-24	0	0	0	multi-exon	FALSE	canonical	3	132	junction_3	10.3319891598859	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCCTGGGATCCGGGAGT	-17	True	NA	NA	False	NA	NA	NA	35143254	35154143	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35143365_35148693_35148724_35151253_35151483_35151632_35151674_35153893
H1_mix_00046793	chr19	+	2479	7	FSM	ENSG00000105699.17	ENST00000427250.5	1606	7	-875	2	-203	0	multi-exon	FALSE	canonical	3	31	junction_2	609.0214601218	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGCTCTGGAGAGAACCA	NA	False	NA	23	True	AATAAA	-11	NA	35248126	35267960	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35249132_35250314_35250660_35266358_35266533_35266678_35266739_35266835_35266968_35267108_35267735_35267823
H1_mix_00046795	chr19	+	1958	8	NIC	ENSG00000105699.17	novel	1963	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	239	junction_3	635.12515237839	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGCTCTGGAGAGAACCA	15	True	NA	23	True	AATAAA	-11	NA	35248764	35267960	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_35249132_35250314_35250660_35258944_35259065_35266358_35266533_35266678_35266739_35266838_35266968_35267108_35267735_35267823
H1_mix_00046796	chr19	+	477	3	FSM	ENSG00000105695.15	ENST00000593348.1	545	3	68	0	68	0	multi-exon	FALSE	canonical	2	2	junction_2	1.5	228	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTACGAGGTAAGGACCAGG	-13	True	NA	NA	False	NA	NA	NA	35309873	35312009	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35310162_35310546_35310644_35311917
H1_mix_00046797	chr19	+	986	6	FSM	ENSG00000105677.12	ENST00000477168.6	986	6	0	0	0	0	multi-exon	FALSE	canonical	3	1924	junction_4	94.351258603158	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTTGCTGCCTCCATTT	21	True	NA	25	True	AGTAAA	-13	NA	35545639	35547522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35545817_35545887_35545958_35546525_35546586_35546671_35547030_35547118_35547241_35547323
H1_mix_00046800	chr19	+	1045	5	FSM	ENSG00000105677.12	ENST00000599895.1	1045	5	0	0	0	0	multi-exon	FALSE	canonical	3	2013	junction_1	68.9583207452154	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTGCCTCCATTTCTCT	55	False	NA	29	True	AGTAAA	-17	NA	35545673	35547526	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35545817_35545887_35545958_35546525_35546586_35546671_35547241_35547323
H1_mix_00046802	chr19	+	760	5	FSM	ENSG00000126254.12	ENST00000586618.5	771	5	-32	43	0	0	multi-exon	FALSE	canonical	3	106	junction_3	336.634352822168	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTGCCCCAAAACCAGTT	-14	True	NA	-23	True	NA	NA	NA	35629035	35637641	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35629282_35629519_35629674_35631139_35631197_35637249_35637353_35637441
H1_mix_00046803	chr19	+	835	4	ISM	ENSG00000105668.7	ENST00000222275.2	1223	7	6665	-12	6665	-6	3prime_fragment	FALSE	canonical	3	12	junction_1	0.471404520791032	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGAATGAGTTTTTTTT	61	False	NA	NA	False	AATAAA	-16	NA	35673477	35678477	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_35673546_35675839_35676020_35677811_35677896_35677974
H1_mix_00046804	chr19	+	6011	34	ISM	ENSG00000272333.8	ENST00000420124.4	8485	37	4357	0	1	0	3prime_fragment	FALSE	canonical	1	2	junction_3	21.3682565388821	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTGGTCTTCCCATTTGT	4363	False	NA	21	True	AATAAA	-18	NA	35722359	35738878	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_35722473_35722567_35722719_35722994_35723275_35723446_35723503_35723731_35724008_35724636_35724732_35724988_35725088_35725219_35725334_35725478_35725626_35725722_35725819_35726235_35726354_35727155_35727270_35727437_35727623_35727697_35727788_35727880_35727986_35728097_35728172_35728773_35728890_35728984_35729077_35729158_35729297_35729966_35730126_35730341_35730463_35730537_35730617_35730706_35730868_35731907_35732136_35732214_35733509_35733596_35733687_35733762_35733873_35736689_35736828_35736911_35736987_35737085_35737264_35737635_35737744_35737858_35737943_35738061_35738192_35738281
H1_mix_00046809	chr19	+	2900	2	ISM	ENSG00000004777.19	ENST00000588248.6	2004	10	3455	-23	921	0	intron_retention	FALSE	canonical	3	61	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGAAGTCGTTCTGGG	1042	False	NA	21	True	AATAAA	-15	NA	35785827	35788822	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_35787073_35787167
H1_mix_00046816	chr19	+	5159	31	FSM	ENSG00000075702.19	ENST00000680806.1	5159	31	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	96.2899556317042	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGGAGGAAGGCACGGGGG	-13	True	NA	-88	True	NA	NA	NA	36054939	36105002	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_36055149_36058779_36058872_36059967_36060031_36065957_36066016_36066256_36066428_36067305_36067444_36067827_36068011_36071555_36071717_36073341_36073532_36075054_36075162_36081432_36081571_36083062_36083242_36084652_36084745_36086686_36086813_36089037_36089106_36089184_36089307_36090444_36090521_36091199_36091312_36091401_36091466_36092688_36092812_36094030_36094165_36097026_36097080_36099398_36099618_36100747_36100876_36101213_36101318_36102013_36102852_36102947_36103075_36103155_36103208_36103342_36103982_36104517_36104676_36104767
H1_mix_00046822	chr19	+	940	6	FSM	ENSG00000105254.12	ENST00000585746.1	875	6	-62	-3	-37	1	multi-exon	FALSE	canonical	3	21	junction_1	695.369944705694	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGAGGACTTCATGATTT	0	True	NA	22	True	ATTAAA	-23	NA	36115775	36125948	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_36115929_36116040_36116185_36120709_36120807_36121526_36121719_36125450_36125524_36125667
H1_mix_00046824	chr19	+	3425	5	NNC	ENSG00000167635.12	novel	3347	4	NA	NA	42	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_2	472.061105684423	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAATCTGTTTTAATTAT	13	False	NA	16	True	ATTAAA	-20	NA	36215147	36238768	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_36215197_36218121_36218196_36225953_36226074_36228747_36228820_36235658
H1_mix_00046825	chr19	+	1991	1	FSM	ENSG00000267309.1	ENST00000592087.1	1392	1	182	-781	182	781	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTGATCTGTGACCTT	193	False	NA	NA	False	AAGAAA	-19	NA	36489830	36491821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_36489800_36491800
H1_mix_00046829	chr19	+	697	5	FSM	ENSG00000233527.10	ENST00000475219.6	1033	5	336	0	29	0	multi-exon	FALSE	canonical	2	5	junction_4	11.5108644332213	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGAAGTTTTGGGGTGG	-27	True	NA	6	True	ATTAAA	-20	NA	36573405	36594708	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_36573526_36574820_36574901_36593845_36593932_36594155_36594300_36594441
H1_mix_00046830	chr19	+	765	6	NNC	ENSG00000233527.10	novel	1033	5	NA	NA	-76	-4	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	17.4745529270422	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGCCATGAAGTTTTGGG	28	True	NA	2	True	ATTAAA	-16	NA	36573460	36594704	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_36573556_36574820_36574901_36577140_36577238_36593845_36593932_36594155_36594300_36594441
H1_mix_00046833	chr19	+	2871	3	FSM	ENSG00000267254.7	ENST00000589556.2	2970	3	31	68	13	-64	multi-exon	FALSE	canonical	3	10	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTGGATTACCTGAGGTC	23	False	NA	NA	False	NA	NA	NA	36797546	36804443	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_36797812_36801202_36801241_36801875
H1_mix_00046838	chr19	+	480	1	FSM	ENSG00000243297.2	ENST00000496160.2	376	1	-431	327	-431	-327	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACAAGGTGGTGACCTGA	NA	False	NA	NA	False	AAAAAG	-14	NA	36901310	36901790	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_36901300_36901800
H1_mix_00046839	chr19	+	4353	7	FSM	ENSG00000198453.14	ENST00000333987.12	4096	7	37	-294	5	285	multi-exon	FALSE	canonical	3	15	junction_3	4.53382350291182	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATTAAAAATTTGAAAATCA	24	True	NA	NA	False	AGTAAA	-9	NA	36916368	36953028	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_36916592_36917578_36917649_36922585_36922847_36925199_36925259_36936745_36936873_36937146_36937243_36949511
H1_mix_00046840	chr19	+	2227	10	FSM	ENSG00000198453.14	ENST00000444991.5	2232	10	5	0	5	0	multi-exon	FALSE	canonical	1	1	junction_7	9.41629792788369	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCACACTGGGGAGAGACC	24	True	NA	NA	False	NA	NA	NA	36916368	36997440	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_36916592_36917578_36917649_36922585_36922847_36925199_36925259_36936745_36936873_36937146_36937243_36974419_36974467_36991175_36991300_36991750_36991847_36996316
H1_mix_00046841	chr19	+	3773	5	FSM	ENSG00000198453.14	ENST00000619231.4	3797	5	24	0	15	0	multi-exon	FALSE	canonical	3	15	junction_1	1.6583123951777	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTACTTGTAATAGTG	6056	False	NA	26	True	AATAAA	-34	NA	36922585	36952741	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_36922847_36925199_36925259_36936745_36936873_36937146_36937243_36949511
H1_mix_00046842	chr19	+	2204	5	FSM	ENSG00000181666.19	ENST00000591485.5	664	5	-22	-1518	-3	1518	multi-exon	FALSE	canonical	3	34	junction_4	32.4451460160068	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTTTCTTTGATACATT	-4	True	NA	-2	True	AATACA	-7	NA	37317896	37326565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37324795
H1_mix_00046844	chr19	+	3387	8	NIC	ENSG00000181666.19	novel	3464	11	NA	NA	4	-25	intron_retention	FALSE	canonical	2	8	junction_5	43.7777317356481	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCATCCCCTCTCCACTG	22	True	NA	-33	True	NA	NA	NA	37317922	37364382	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37324795_37325275_37347189_37347317_37347776_37347873_37362105
H1_mix_00046846	chr19	+	2948	6	FSM	ENSG00000181666.19	ENST00000324411.8	2929	6	-19	0	1	0	multi-exon	FALSE	canonical	1	1	junction_3	44.8	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCAGTGTATCCTCATTC	-4	True	NA	40	True	AATAAA	-30	NA	37334658	37364455	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_37334783_37335168_37335258_37344609_37344775_37347189_37347317_37347776_37347873_37362108
H1_mix_00046850	chr19	+	797	5	FSM	ENSG00000189164.15	ENST00000588512.5	815	5	18	0	1	0	multi-exon	FALSE	canonical	1	2	junction_3	9.12071817347735	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGAAAGTCATGATTTTT	14	True	NA	NA	False	AGTAAA	-30	NA	37371194	37388783	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_37371227_37374157_37374232_37379119_37379237_37380276_37380373_37388305
H1_mix_00046851	chr19	+	5060	5	FSM	ENSG00000189164.15	ENST00000436120.7	5186	5	87	39	5	-39	multi-exon	FALSE	canonical	2	9	junction_4	7.11951543294907	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGTGTATTTTATTTAA	5	True	NA	NA	False	NA	NA	NA	37371185	37393027	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_37371227_37374157_37374232_37379119_37379247_37380276_37380373_37388305
H1_mix_00046858	chr19	+	274	3	FSM	ENSG00000167642.13	ENST00000590510.5	301	3	27	0	27	0	multi-exon	TRUE	canonical	2	3	junction_1	1833	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATGCAGCGGATTCCTCT	NA	False	NA	NA	False	NA	NA	NA	38244061	38287905	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_38244135_38283626_38283798_38287875
H1_mix_00046861	chr19	+	2542	7	FSM	ENSG00000130244.13	ENST00000588348.5	2530	7	-14	2	5	0	multi-exon	FALSE	canonical	2	18	junction_1	9.82626864865578	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGACCTCTCTCTGTGG	4	True	NA	19	True	AATAAA	-17	NA	38403139	38409086	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_38403219_38403337_38403487_38403559_38403695_38404907_38405114_38405343_38405422_38405518_38407078_38408750
H1_mix_00046862	chr19	+	1120	6	NIC	ENSG00000130244.13	novel	1313	8	NA	NA	52	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	15.582040944626	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGACCTCTCTCTGTGG	49	False	NA	19	True	AATAAA	-17	NA	38403238	38409086	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_38403487_38403559_38403695_38404907_38405114_38405343_38405422_38405518_38405636_38408750
H1_mix_00046865	chr19	+	515	6	FSM	ENSG00000196218.14	ENST00000596431.5	515	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	3.87814388593306	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTTATTTTGCTTATA	6153	False	NA	NA	False	AATAAA	-13	NA	38534731	38538673	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_38534820_38535140_38535221_38535315_38535393_38535996_38536071_38537879_38537961_38538558
H1_mix_00046866	chr19	+	488	3	FSM	ENSG00000267291.1	ENST00000589557.1	516	3	11	17	11	-17	multi-exon	FALSE	canonical	1	2	junction_1	3	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTTCATACATTGAGTT	NA	False	NA	-9	True	NA	NA	NA	38596356	38601677	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_38596437_38597252_38597396_38601412
H1_mix_00046867	chr19	+	704	5	FSM	ENSG00000178982.10	ENST00000593062.5	704	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	941.908534572227	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTGATTTCTTTATTT	-10	True	NA	NA	False	NA	NA	NA	38619185	38630968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_38619328_38620336_38620436_38624076_38624198_38626027_38626103_38630701
H1_mix_00046870	chr19	+	2757	9	NNC	ENSG00000130669.17	novel	3025	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	171.134769626163	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCTGTGTGCGATGTG	-10	True	NA	13	True	ATTAAA	-14	NA	39125781	39179401	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_39125920_39169531_39169758_39172917_39173376_39173575_39174011_39174930_39175065_39175311_39175439_39176589_39176716_39177674_39177810_39178423
H1_mix_00046871	chr19	+	3043	11	NIC	ENSG00000130669.17	novel	3025	11	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	172.992514288914	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCTGTGTGCGATGTG	-6	True	NA	13	True	ATTAAA	-14	NA	39125785	39179401	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_39125920_39168229_39168303_39168624_39168841_39169531_39169758_39172917_39173377_39173575_39174011_39174930_39175065_39175311_39175439_39176589_39176716_39177674_39177810_39178423
H1_mix_00046872	chr19	+	2776	10	NNC	ENSG00000130669.17	novel	3025	11	NA	NA	6	-13	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_8	146.429437774355	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTGTCTTGTTTTGTGTC	28	False	NA	0	True	ATTAAA	-1	NA	39125819	39179388	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_39125920_39168229_39168303_39169531_39169758_39172917_39173377_39173575_39174011_39174930_39175065_39175311_39175439_39176589_39176716_39177678_39177810_39178423
H1_mix_00046874	chr19	+	3079	15	NNC	ENSG00000179134.16	novel	4680	14	NA	NA	2	-162	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_2	277.419642713463	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCCTCTCCCTGCTT	8	True	NA	NA	False	NA	NA	NA	39342443	39384026	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_39342577_39354005_39354067_39355054_39355151_39356688_39357090_39369654_39370126_39375649_39375890_39376436_39376547_39376704_39376792_39377484_39377825_39378503_39378590_39379965_39380085_39380586_39380786_39380989_39381114_39383207_39383292_39383498
H1_mix_00046877	chr19	+	2157	15	ISM	ENSG00000090924.15	ENST00000458508.6	3898	20	-722	4324	-82	0	5prime_fragment	FALSE	canonical	3	13	junction_2	30.2807442013527	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTGACTGCCCCGGTTC	18	True	NA	NA	False	NA	NA	NA	39412586	39421113	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_39413413_39414064_39414196_39415168_39415261_39415338_39415440_39416347_39416415_39416550_39416598_39416849_39417001_39417554_39417693_39417904_39418106_39418733_39418827_39418916_39419004_39420625_39420660_39420750_39420853_39420948_39420997_39421074
H1_mix_00046882	chr19	+	3796	15	FSM	ENSG00000196235.14	ENST00000599335.5	3796	15	0	0	0	0	multi-exon	FALSE	canonical	3	535	junction_6	38.4976145563672	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ACTAAA	-6	NA	39467453	39475225	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_39468862_39469078_39469173_39469261_39469399_39470118_39470275_39470376_39470524_39471356_39471504_39471604_39471731_39472408_39472494_39472809_39472930_39473011_39473115_39473202_39473331_39473415_39473522_39473962_39474122_39474233_39474403_39474514
H1_mix_00046888	chr19	+	2389	8	FSM	ENSG00000090932.11	ENST00000205143.4	2332	8	-65	8	8	4	multi-exon	FALSE	canonical	3	30	junction_6	23.430313524081	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTAACGAGGCTGAATGC	NA	False	NA	22	True	TATAAA	-22	NA	39498902	39508473	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_39499044_39499191_39499474_39500614_39500673_39502814_39503058_39504070_39504289_39505228_39505452_39507038_39507619_39507829
H1_mix_00046889	chr19	+	946	3	NIC	ENSG00000186838.14	novel	481	4	NA	NA	-155	-12	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	17	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGGTGGTGTGTGCCTGT	236	False	NA	8	True	AATAAA	-12	NA	39515658	39520674	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_39516022_39518739_39518794_39520145
H1_mix_00046890	chr19	+	967	5	NIC	ENSG00000186838.14	novel	1704	6	NA	NA	0	-11	combination_of_known_junctions	FALSE	canonical	2	10	junction_3	12.8330627677106	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGGTGTGTGCCTGTG	391	False	NA	9	True	AATAAA	-13	NA	39515813	39520675	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_39516022_39518739_39518794_39518902_39518978_39519070_39519171_39520145
H1_mix_00046891	chr19	+	700	1	FSM	ENSG00000269584.1	ENST00000593394.1	559	1	-129	-12	-129	12	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTCCAGAAATACCATTT	NA	False	NA	NA	False	NA	NA	NA	39534333	39535033	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_39534300_39535000
H1_mix_00046893	chr19	+	881	1	Intergenic	novelGene_644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTAATAGTTACATACATA	NA	False	NA	NA	False	NA	NA	NA	39981918	39982799	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_39981900_39982800
H1_mix_00046894	chr19	+	550	6	FSM	ENSG00000187187.14	ENST00000599504.5	626	6	76	0	-8	0	multi-exon	FALSE	canonical	1	1	junction_2	1.93907194296653	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACATGAATTTGAGAGAC	-10	True	NA	NA	False	AGTAAA	-45	NA	39997111	40013803	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_39997158_39997860_39997916_40006095_40006183_40007273_40007401_40008469_40008566_40013664
H1_mix_00046899	chr19	+	2025	12	NIC	ENSG00000105223.20	novel	1966	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	103	junction_1	531.759577190561	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTACAGCCTGTGCCT	NA	False	NA	6	True	AGTAAA	-6	NA	40348583	40378475	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_40348769_40366418_40366511_40366609_40366685_40366772_40366916_40367695_40367880_40369907_40370029_40370109_40370238_40371672_40371874_40374480_40374621_40376608_40376775_40377785_40377886_40377985
H1_mix_00046903	chr19	+	2193	13	FSM	ENSG00000105223.20	ENST00000409587.5	2180	13	-13	0	0	0	multi-exon	FALSE	canonical	3	83	junction_2	675.155640492538	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGTGCCTGACTGAGT	-14	True	NA	14	True	AGTAAA	-14	NA	40348671	40378483	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_40348769_40365717_40365931_40366383_40366511_40366609_40366685_40366772_40366916_40367695_40367880_40369907_40370029_40370109_40370238_40371672_40371874_40374480_40374621_40376608_40376775_40377785_40377886_40377985
H1_mix_00046905	chr19	+	2176	13	NIC	ENSG00000105223.20	novel	2180	13	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_1	524.67812884557	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGTGCCTGACTGAGT	24	True	NA	14	True	AGTAAA	-14	NA	40348709	40378483	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_40348769_40365661_40365931_40366418_40366511_40366609_40366685_40366772_40366916_40367695_40367880_40369907_40370029_40370109_40370238_40371672_40371874_40374480_40374621_40376608_40376775_40377785_40377886_40377985
H1_mix_00046909	chr19	+	750	3	FSM	ENSG00000105223.20	ENST00000488311.1	750	3	0	0	0	0	multi-exon	FALSE	canonical	3	1769	junction_2	74.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACACCTCAGCTGACAGCG	4524	False	NA	NA	False	NA	NA	NA	40376266	40378127	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_40376775_40377785_40377886_40377985
H1_mix_00046910	chr19	+	1608	4	ISM	ENSG00000160460.17	ENST00000597389.5	5957	24	57772	-889	-653	0	3prime_fragment	FALSE	canonical	2	3	junction_1	8.05536398239638	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGTCTATGGTCCTTTGTT	NA	False	NA	5	True	AATAAA	-14	NA	40570385	40576458	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_40570729_40572018_40572193_40572337_40572381_40575410
H1_mix_00046911	chr19	+	731	3	FSM	ENSG00000160460.17	ENST00000595690.1	763	3	32	0	32	0	multi-exon	FALSE	canonical	3	19	junction_2	1	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAGGACCTGACACATCT	NA	False	NA	NA	False	NA	NA	NA	40571671	40575577	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_40572193_40572337_40572381_40575410
H1_mix_00046914	chr19	+	552	6	FSM	ENSG00000160410.15	ENST00000595631.5	552	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	249.626921625052	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTATACCCAGTTTCTAGT	258	False	NA	NA	False	NA	NA	NA	40577157	40580627	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_40577285_40577395_40577442_40577556_40577631_40578461_40578543_40580323_40580486_40580565
H1_mix_00046918	chr19	+	1019	6	FSM	ENSG00000160410.15	ENST00000597396.5	1019	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	221.080075990579	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAACATCTTGCTTATTCT	30	False	NA	15	True	AATAAA	-10	NA	40586895	40591392	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_40586945_40588623_40588780_40589081_40589179_40590243_40590423_40590732_40590854_40590975
H1_mix_00046920	chr19	+	4884	31	NIC	ENSG00000090006.18	novel	4948	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_2	90.9220728609579	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTTGCCTCCTCCTGTC	37	True	NA	22	True	ATTAAA	-16	NA	40597234	40629817	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_40597381_40599196_40599256_40599420_40599557_40600067_40600178_40605034_40605227_40605404_40605653_40605728_40605832_40606232_40606308_40606403_40606527_40607364_40607530_40608219_40608370_40608483_40608604_40609529_40609662_40609745_40609872_40610531_40610658_40611151_40611395_40611858_40611985_40612072_40612193_40613064_40613197_40613403_40613530_40613915_40614039_40614314_40614447_40619346_40619494_40622400_40622668_40622949_40623022_40623603_40623733_40623935_40624083_40625856_40626010_40626974_40627356_40627704_40627858_40629395
H1_mix_00046929	chr19	+	2054	10	NIC	ENSG00000090006.18	novel	3140	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_4	98.7669660374708	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTTGCCTCCTCCTGTC	2	True	NA	22	True	ATTAAA	-16	NA	40613915	40629817	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_40614039_40614314_40614447_40619346_40619494_40622400_40622668_40623603_40623733_40623935_40624083_40625856_40626010_40626974_40627356_40627704_40627858_40629395
H1_mix_00046930	chr19	+	1883	10	NIC	ENSG00000090006.18	novel	3140	19	NA	NA	29	-1	combination_of_known_junctions	FALSE	canonical	3	49	junction_2	107.337934108895	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTTTGCCTCCTCCTGT	-4	True	NA	21	True	ATTAAA	-15	NA	40613944	40629816	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_40614039_40614314_40614447_40617099_40617226_40619346_40619494_40623603_40623733_40623935_40624083_40625856_40626010_40626974_40627356_40627704_40627858_40629395
H1_mix_00046935	chr19	+	2545	7	NIC	ENSG00000090006.18	novel	2446	11	NA	NA	-527	-1	intron_retention	FALSE	canonical	3	181	junction_1	50.4933989085042	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTTTGCCTCCTCCTGT	7687	False	NA	21	True	ATTAAA	-15	NA	40621860	40629816	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_40623022_40623603_40623733_40623935_40624083_40625856_40626010_40626974_40627356_40627704_40627858_40629395
H1_mix_00046937	chr19	+	715	4	FSM	ENSG00000167578.18	ENST00000600078.5	715	4	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_3	20.3960780543711	1193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCCCCAACATCGTGGTC	5	True	NA	NA	False	NA	NA	NA	40778273	40783973	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_40778392_40780018_40780500_40783777_40783841_40783920
H1_mix_00046938	chr19	+	1809	7	FSM	ENSG00000167578.18	ENST00000597476.5	1982	7	173	0	173	0	multi-exon	FALSE	canonical	3	254	junction_3	17.4228457938293	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTCTTGGCCTCCATT	951	False	NA	6	True	CATAAA	-13	NA	40779219	40796938	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_40780100_40780384_40780500_40783777_40783841_40783920_40784076_40786664_40786761_40786847_40786979_40796569
H1_mix_00046939	chr19	+	1904	2	FSM	ENSG00000269858.6	ENST00000595621.1	758	2	-820	-326	0	0	multi-exon	FALSE	canonical	3	1055	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGACTCCATCTGCAAT	6479	False	NA	20	True	AATAAA	-22	NA	40806321	40808434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_40807275_40807483
H1_mix_00046940	chr19	+	1418	5	FSM	ENSG00000197408.10	ENST00000593831.1	1426	5	8	0	8	0	multi-exon	FALSE	canonical	1	1	junction_2	14.2543852901484	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATTCACATAACATAAAAT	NA	False	NA	NA	False	TTTAAA	-11	NA	41003953	41017373	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_41004164_41004296_41004447_41012297_41012486_41012673_41012816_41016645
H1_mix_00046941	chr19	+	1532	3	FSM	ENSG00000197408.10	ENST00000597612.1	1849	3	317	0	317	0	multi-exon	FALSE	canonical	2	4	junction_2	15	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTGATTTTTTTTTTTT	5752	False	NA	NA	False	CATAAA	-13	NA	41009993	41017847	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_41010136_41012297_41012486_41016645
H1_mix_00046942	chr19	+	4749	10	NNC	ENSG00000167600.14	novel	2612	9	NA	NA	-3057	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	598.75248910537	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTACTGCGTGTGTGACC	NA	False	NA	18	True	ATTAAA	-18	NA	41190152	41207533	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_41190329_41191251_41193442_41194543_41194710_41197778_41197929_41198461_41198623_41198708_41198889_41201230_41201373_41203449_41203638_41205957_41206100_41206279
H1_mix_00046944	chr19	+	759	6	FSM	ENSG00000167600.14	ENST00000595590.1	759	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	925.439657676285	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAAGCGGAGCTCTTCCT	479	False	NA	NA	False	NA	NA	NA	41193721	41206308	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_41193814_41194543_41194710_41201230_41201373_41203449_41203638_41205957_41206100_41206279
H1_mix_00046945	chr19	+	283	1	ISM	ENSG00000105323.18	ENST00000599719.5	1473	10	49	31588	40	-9213	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGCCCTGCACTCCAGCC	42	False	NA	NA	False	NA	NA	NA	41262710	41262993	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_41262700_41263000
H1_mix_00046947	chr19	+	2447	12	FSM	ENSG00000105323.18	ENST00000599614.5	2447	12	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_11	332.360279473798	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTTTTTGGTAATTATG	7031	False	NA	88	True	AAAAAG	-37	NA	41272117	41307087	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_41272236_41273981_41274056_41276158_41276299_41279076_41279177_41281162_41281276_41292244_41292512_41294337_41294461_41294557_41294687_41301535_41301705_41302664_41302950_41303971_41304262_41306448
H1_mix_00046950	chr19	+	3404	30	FSM	ENSG00000076928.18	ENST00000599846.5	3393	30	-11	0	0	0	multi-exon	TRUE	canonical	0	0	junction_14	69.2870092814837	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGATCTGTGTGTGTGAT	2094	False	NA	28	True	AATATA	-12	NA	41883172	41907448	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_41883290_41888063_41888107_41888191_41888279_41888751_41888866_41892024_41892124_41892330_41892374_41892602_41892850_41893273_41893304_41894206_41894307_41894450_41894548_41894625_41894662_41895348_41895487_41896376_41896483_41897945_41898114_41898441_41898588_41901886_41902034_41902273_41902357_41902532_41902659_41902783_41902899_41903306_41903408_41903706_41903785_41904034_41904111_41904215_41904384_41904948_41905037_41905174_41905262_41905759_41905828_41905938_41906026_41906456_41906621_41906702_41906804_41907104
H1_mix_00046951	chr19	+	3448	28	FSM	ENSG00000076928.18	ENST00000600274.5	3439	28	-10	1	0	1	multi-exon	FALSE	canonical	3	146	junction_1	31.3396368757867	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTGTGTGTGATGGCGG	2094	False	NA	33	True	AATATA	-17	NA	41883172	41907453	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_41883290_41888063_41888107_41888191_41888279_41888751_41888866_41892024_41892374_41892602_41892850_41893273_41893304_41894206_41894307_41894450_41894548_41894625_41894662_41895348_41895487_41896376_41896483_41898441_41898588_41901886_41902034_41902273_41902357_41902532_41902659_41902783_41902899_41903306_41903408_41903706_41903785_41904034_41904111_41904215_41904384_41904948_41905037_41905174_41905262_41905759_41905828_41905938_41906026_41906456_41906621_41906702_41906804_41907104
H1_mix_00046954	chr19	+	777	3	FSM	ENSG00000254887.1	ENST00000527895.1	759	3	-18	0	-18	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATTGCTAAGCTCAGAGA	NA	False	NA	NA	False	AATAAA	-28	NA	42132536	42137099	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_42132762_42132904_42133029_42136671
H1_mix_00046956	chr19	+	5626	20	FSM	ENSG00000079432.9	ENST00000160740.7	6111	20	485	0	45	0	multi-exon	TRUE	canonical	2	6	junction_1	24.7648218021444	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGGCTGTAGGCTCT	8	True	NA	24	True	ATTAAA	-14	NA	42284504	42295796	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_42284772_42286770_42286921_42287005_42287241_42287319_42287450_42287544_42287728_42287809_42287976_42288887_42289091_42289180_42289407_42289847_42289952_42290232_42291467_42291557_42291746_42292085_42292208_42292299_42292467_42292568_42292860_42292958_42293282_42293591_42293837_42293934_42294090_42294172_42294305_42294603_42294736_42294823
H1_mix_00046958	chr19	+	1656	2	FSM	ENSG00000188368.11	ENST00000598490.1	1641	2	-15	0	-15	0	multi-exon	FALSE	canonical	3	55	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTGATTTTCAGTGAGT	NA	False	NA	5	True	AATAAA	-15	NA	42302082	42310813	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_42302504_42309578
H1_mix_00046959	chr19	+	372	2	NNC	ENSG00000213904.10	novel	306	2	NA	NA	209	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGTGTGCTGGGCATAG	4626	False	NA	5	True	AGTAAA	-15	NA	42401790	42408440	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_42401980_42408257
H1_mix_00046960	chr19	+	694	5	ISM	ENSG00000234465.11	ENST00000612042.4	914	6	410	5	410	0	3prime_fragment	FALSE	canonical	3	6	junction_2	36.3275033548963	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGTCCTTGTGGTGTG	413	False	NA	NA	False	TATAAA	-17	NA	43577209	43582098	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_43577262_43578589_43578707_43581211_43581365_43581562_43581704_43581867
H1_mix_00046962	chr19	+	1535	3	FSM	ENSG00000124444.16	ENST00000529930.1	830	3	-115	-590	0	0	multi-exon	FALSE	canonical	3	15	junction_1	44.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGCTTTTGAGTGGGA	67	False	NA	10	True	ATTAAA	-16	NA	43596479	43600004	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_43596744_43597096_43597194_43598830
H1_mix_00046963	chr19	+	2466	7	FSM	ENSG00000167637.18	ENST00000650832.1	2462	7	-4	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	3.85861230093008	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAATATAATTAATATGAAA	3	True	NA	NA	False	NA	NA	NA	43827373	43848809	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_43827445_43827775_43827941_43828201_43828282_43831317_43831382_43835504_43835593_43837052_43837180_43846938
H1_mix_00046964	chr19	+	5631	7	FSM	ENSG00000167637.18	ENST00000618787.5	5684	7	53	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	4.78423336480244	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCTGCACTTCTATAGT	3	True	NA	8	True	ATTAAA	-16	NA	43827373	43852017	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_43827445_43828201_43828282_43831317_43831382_43833504_43833627_43835504_43835593_43837052_43837180_43846938
H1_mix_00046965	chr19	+	2613	1	FSM	ENSG00000278917.1	ENST00000623722.1	4179	1	320	1246	320	-1246	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGGTAATTTGTCCAGTG	NA	False	NA	NA	False	NA	NA	NA	43891552	43894165	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_43891600_43894200
H1_mix_00046966	chr19	+	388	2	NNC	ENSG00000267191.3	novel	359	2	NA	NA	-2	3978	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	0	35	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTACCACCACGCCCGTCT	-13	True	NA	NA	False	ATTAAA	-4	NA	43901863	43906314	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_43902132_43906194
H1_mix_00046969	chr19	+	1712	1	FSM	ENSG00000159882.13	ENST00000589275.1	1794	1	4	78	4	-78	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCCAAGATCACGCCACT	-13	True	NA	NA	False	NA	NA	NA	44002962	44004674	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44003000_44004700
H1_mix_00046970	chr19	+	547	4	FSM	ENSG00000178386.13	ENST00000585552.5	541	4	-6	0	-1	0	multi-exon	FALSE	canonical	3	28	junction_3	6.97614984548545	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGGCCAAACATCTTTG	5	True	NA	NA	False	NA	NA	NA	44052034	44060924	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44052196_44055108_44055192_44060454_44060582_44060748
H1_mix_00046971	chr19	+	545	5	ISM	ENSG00000267680.6	ENST00000693561.1	3993	6	-20	8638	-20	38	5prime_fragment	FALSE	canonical	3	21	junction_1	21.5058131676066	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGATGAAGACAGCAATCCA	6721	False	NA	NA	False	AAGAAA	-9	NA	44094340	44101188	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_44094531_44096342_44096432_44097805_44097889_44100800_44100928_44101132
H1_mix_00046972	chr19	+	2300	4	FSM	ENSG00000256294.8	ENST00000590612.1	2404	4	104	0	104	0	multi-exon	FALSE	canonical	3	19	junction_3	4.98887651569859	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGTACTCATTTATGGG	226	False	NA	NA	False	TTTAAA	-11	NA	44115648	44132735	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44115843_44118187_44118315_44118481_44118575_44130849
H1_mix_00046973	chr19	+	852	7	FSM	ENSG00000167380.17	ENST00000588742.5	447	7	-9	-396	-2	0	multi-exon	FALSE	canonical	3	6	junction_2	55.8380595014627	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGTGTGAAATCTTAAAT	0	True	NA	NA	False	ATTAAA	-16	NA	44165094	44175429	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44165143_44165587_44165614_44165756_44165808_44170034_44170096_44172087_44172215_44172859_44172953_44174983
H1_mix_00046974	chr19	+	1136	2	FSM	ENSG00000167380.17	ENST00000590759.1	734	2	-1006	604	-1006	0	multi-exon	FALSE	canonical	3	162	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGAGGAAGCTGTACCGA	3892	False	NA	NA	False	GGGGCT	-12	NA	44169026	44172154	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44170096_44172087
H1_mix_00046976	chr19	+	2980	5	FSM	ENSG00000131115.16	ENST00000589005.5	2943	5	-37	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	17.1081121109256	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTAAGGACTCATGATTCT	-15	True	NA	15	True	AATAAA	-20	NA	44212537	44237267	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44212586_44213089_44213245_44228445_44228573_44229732_44229817_44234701
H1_mix_00046978	chr19	+	5743	7	NIC	ENSG00000073008.15	novel	3078	8	NA	NA	-27	0	intron_retention	FALSE	canonical	3	45	junction_4	8.89600409672168	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCTGTGTGCAATGGGGT	NA	False	NA	21	True	ATTAAA	-21	NA	44643770	44663583	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_44644176_44647222_44647571_44649808_44650106_44653899_44654018_44657761_44657911_44658741_44661324_44661739
H1_mix_00046979	chr19	+	1344	6	FSM	ENSG00000073008.15	ENST00000406449.8	1344	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	9.41063228481487	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGCGTATAGGGTCTTA	72	False	NA	NA	False	NA	NA	NA	44644096	44659094	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44644176_44647222_44647571_44649808_44650106_44653899_44654018_44657761_44657911_44658741
H1_mix_00046980	chr19	+	2197	8	FSM	ENSG00000186567.14	ENST00000358777.10	2215	8	-30	48	-30	-48	multi-exon	FALSE	canonical	1	1	junction_1	1.92724822331886	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGTCACTTGGCAGGGGAA	NA	False	NA	NA	False	AAAACA	-20	NA	44671451	44684307	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44671987_44672595_44672965_44676270_44676422_44678852_44678937_44680287_44680335_44681226_44681313_44682566_44682621_44683436
H1_mix_00046982	chr19	+	937	1	FSM	ENSG00000285128.1	ENST00000644659.1	310	1	-630	3	-630	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGCCGCAAATGACAGCAA	7459	False	NA	2	True	AATAAA	-13	NA	44803070	44804007	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44803100_44804000
H1_mix_00046983	chr19	+	950	4	FSM	ENSG00000130202.10	ENST00000591581.1	950	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	1223.38337772298	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGGGTGTCTTGTAATAC	6397	False	NA	24	True	AATAAA	-18	NA	44871852	44878938	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44872150_44873915_44874034_44874329_44874479_44878552
H1_mix_00046984	chr19	+	1387	3	FSM	ENSG00000280087.1_ENSG00000130203.10	ENST00000425718.1	923	3	-25	-439	-25	0	multi-exon	FALSE	canonical	3	11767	junction_2	161.5	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTGGCCTCCCCCTGTG	314	False	NA	33	True	AATAAA	-21	NA	44906334	44909393	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44906668_44907759_44907953_44908532
H1_mix_00046985	chr19	+	562	4	FSM	ENSG00000130208.10	ENST00000592885.5	562	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	948.780738046936	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTCTCCTGAGTGCTTC	-5	True	NA	38	True	AATAAA	-13	NA	44914702	44919344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44914734_44914871_44914950_44916189_44916471_44919172
H1_mix_00046986	chr19	+	425	3	FSM	ENSG00000130208.10	ENST00000586638.5	425	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	1106	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTCCTGAGTGCTTCTT	16	True	NA	40	True	AATAAA	-15	NA	44914868	44919346	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44914950_44916189_44916360_44919172
H1_mix_00046987	chr19	+	279	3	FSM	ENSG00000214855.10	ENST00000589081.2	301	3	19	3	16	-1	multi-exon	FALSE	canonical	1	2	junction_2	11	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTCTGGCCAGGCATGG	17	False	NA	11	True	AATAAA	-15	NA	44926819	44931190	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44926830_44926955_44927034_44930999
H1_mix_00046988	chr19	+	1463	8	FSM	ENSG00000104853.16	ENST00000588855.5	1522	8	0	59	0	-59	multi-exon	FALSE	canonical	1	13	junction_1	324.116255283155	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTCTCTGCTCCTGGCTC	-8	True	NA	NA	False	NA	NA	NA	44954584	44987803	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44954702_44961962_44962076_44973086_44973211_44974438_44974598_44977342_44977461_44985217_44985304_44986454_44986576_44987178
H1_mix_00046989	chr19	+	2348	14	FSM	ENSG00000104853.16	ENST00000546079.5	2342	14	-6	0	0	0	multi-exon	FALSE	canonical	1	13	junction_1	248.350606338376	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCGGGGGTGGGGCCGGGC	-8	True	NA	NA	False	NA	NA	NA	44954584	44993190	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_44954702_44961962_44962076_44973086_44973211_44974438_44974598_44977342_44977461_44985217_44985304_44986454_44986576_44987178_44987424_44988079_44988174_44990394_44990586_44990849_44990946_44991237_44991374_44992232_44992401_44992610
H1_mix_00046991	chr19	+	546	3	FSM	ENSG00000104856.14	ENST00000510184.1	546	3	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	6.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCAGGGACAGATGCGCC	NA	False	NA	NA	False	NA	NA	NA	45021829	45025678	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_45022211_45025328_45025421_45025605
H1_mix_00046992	chr19	+	424	4	FSM	ENSG00000104859.15	ENST00000592056.5	582	4	6	152	6	82	multi-exon	FALSE	canonical	3	95	junction_1	19.8662192343351	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGCCCCTGTTCTTTTCC	-5	True	NA	NA	False	NA	NA	NA	45039055	45052935	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_45039109_45040183_45040312_45052070_45052169_45052790
H1_mix_00046993	chr19	+	633	6	FSM	ENSG00000104859.15	ENST00000585615.5	633	6	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_2	7.49933330370107	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTCCCGTCACCTGTC	8140	False	NA	33	True	AATAAA	-12	NA	45068201	45070942	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_45068481_45069065_45069125_45069201_45069249_45070021_45070105_45070536_45070562_45070802
H1_mix_00046994	chr19	+	622	3	FSM	ENSG00000104892.17	ENST00000494686.1	1194	3	-18	590	-18	17	multi-exon	FALSE	canonical	3	41	junction_1	4.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCACGGGCAGGGCGAGG	NA	False	NA	NA	False	NA	NA	NA	45340721	45346774	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_45340847_45345533_45345800_45346543
H1_mix_00046997	chr19	+	901	2	FSM	ENSG00000125740.14	ENST00000590335.1	2170	2	137	1132	137	-1118	multi-exon	FALSE	canonical	1	1	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGTAAGGGACATCAGAA	135	False	NA	NA	False	NA	NA	NA	45468132	45470949	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_45468713_45470628
H1_mix_00046999	chr19	+	400	3	FSM	ENSG00000125753.14	ENST00000590603.1	388	3	-12	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	334.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCCTCCAGGTCCCCCCC	12	True	NA	NA	False	NA	NA	NA	45507478	45522391	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_45507777_45522167_45522218_45522339
H1_mix_00047004	chr19	+	618	2	NNC	ENSG00000259605.3	novel	1402	2	NA	NA	51	298	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAAGTTTGCAGCAACT	11	True	NA	NA	False	NA	NA	NA	45768437	45769351	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_45768837_45769132
H1_mix_00047006	chr19	+	1813	3	FSM	ENSG00000268401.2	ENST00000595955.2	2056	3	156	87	-65	-87	multi-exon	FALSE	canonical	1	2	junction_2	2	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTATAAGCCCCAGGTAG	NA	False	NA	NA	False	NA	NA	NA	46027803	46031580	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_46028044_46028146_46028259_46030119
H1_mix_00047008	chr19	+	1950	12	FSM	ENSG00000011485.15	ENST00000391919.1	1929	12	-21	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	263.369457368124	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTCTCTGGATGGTGGA	2	True	NA	22	True	AATAAA	-18	NA	46347086	46390852	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_46347218_46353747_46353990_46375603_46375752_46376452_46376575_46383779_46383879_46384803_46384910_46387092_46387236_46387365_46387454_46388407_46388449_46388552_46388732_46390050_46390133_46390283
H1_mix_00047010	chr19	+	878	7	FSM	ENSG00000011485.15	ENST00000491003.5	878	7	0	0	0	0	multi-exon	FALSE	canonical	3	831	junction_2	34.1991715299265	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCCCAACGTCAAGCCCAT	NA	False	NA	NA	False	NA	NA	NA	46383793	46390286	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_46383879_46384803_46384910_46387092_46387236_46387365_46387454_46388407_46388449_46388552_46388732_46390050
H1_mix_00047011	chr19	+	476	1	FSM	ENSG00000204850.4	ENST00000377652.4	1995	1	1443	76	1443	-76	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGGCCCTCACTCCCATAC	1140	False	NA	NA	False	NA	NA	NA	46495950	46496426	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_46496000_46496400
H1_mix_00047012	chr19	+	927	6	FSM	ENSG00000160014.17	ENST00000477244.5	696	6	-231	0	4	0	multi-exon	FALSE	canonical	3	458	junction_2	1811.10887579957	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTGATAAAGCAACAAAAGA	NA	False	NA	-3	True	NA	NA	NA	46601077	46609275	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_46601438_46605826_46605858_46608198_46608341_46608481_46608589_46608845_46608982_46609124
H1_mix_00047013	chr19	+	882	7	FSM	ENSG00000160014.17	ENST00000602169.2	880	7	-2	0	0	0	multi-exon	FALSE	canonical	2	32	junction_2	2327.62854997671	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGCATGATTGCTCTTT	8	True	NA	25	True	GATAAA	-20	NA	46601344	46609303	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_46601438_46605826_46605858_46605993_46606186_46608196_46608341_46608481_46608589_46608845_46608982_46609124
H1_mix_00047014	chr19	+	2536	3	FSM	ENSG00000160014.17	ENST00000486500.1	2536	3	0	0	0	0	multi-exon	FALSE	canonical	3	4576	junction_2	282.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGCTCCTCTCCTCCTG	5790	False	NA	25	True	AATAAA	-17	NA	46607961	46610781	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_46608341_46608481_46608982_46609124
H1_mix_00047017	chr19	+	615	3	FSM	ENSG00000130751.10	ENST00000601169.1	612	3	-3	0	0	0	multi-exon	TRUE	canonical	3	7	junction_1	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGGGTCTCCAAAACACC	11	True	NA	NA	False	NA	NA	NA	47035328	47040758	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_47035359_47035859_47036130_47040443
H1_mix_00047019	chr19	+	789	4	FSM	ENSG00000130751.10	ENST00000600352.1	764	4	0	-25	0	0	multi-exon	FALSE	canonical	2	5	junction_1	48.9148920745683	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGGGTCTCCAAAACACC	571	False	NA	NA	False	NA	NA	NA	47035888	47040758	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_47036130_47039076_47039152_47039406_47039565_47040443
H1_mix_00047020	chr19	+	1810	3	NIC	ENSG00000130751.10	novel	2043	11	NA	NA	4091	0	intron_retention	FALSE	canonical	3	98	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTGGGCTCCGGGCTG	4662	False	NA	11	True	ATTAAA	-18	NA	47039979	47045759	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_47041126_47042809_47042905_47045190
H1_mix_00047021	chr19	+	576	5	FSM	ENSG00000142230.13	ENST00000597808.5	570	5	-6	0	-6	0	multi-exon	FALSE	canonical	3	146	junction_1	1418.57294049337	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGATTCTTCTGAGAC	NA	False	NA	NA	False	NA	NA	NA	47130775	47155177	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_47130859_47143493_47143606_47150201_47150376_47152897_47153041_47155113
H1_mix_00047022	chr19	+	2211	10	FSM	ENSG00000142230.13	ENST00000414294.6	2211	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_7	1399.69923577077	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTGTTTTTCTTCCAC	-1	True	NA	23	True	AATAAA	-17	NA	47130858	47210191	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_47131029_47143493_47143606_47150201_47150376_47152897_47153041_47155113_47155214_47169817_47169924_47180145_47180304_47197232_47197378_47203670_47203741_47209158
H1_mix_00047023	chr19	+	1857	8	FSM	ENSG00000142230.13	ENST00000392776.3	1851	8	-6	0	0	0	multi-exon	FALSE	canonical	3	167	junction_6	1139.44585529232	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGTTACTTGCTTTAGG	29	True	NA	2	True	TTTAAA	-10	NA	47130888	47210170	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_47131029_47143493_47143606_47150201_47150376_47152897_47153041_47155113_47155214_47169817_47169924_47203670_47203741_47209158
H1_mix_00047025	chr19	+	2218	13	NNC	ENSG00000105321.14	novel	834	5	NA	NA	-175	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	62.9344897492623	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATTCCCCCAGGTGTGT	813	False	NA	18	True	AATAAA	-18	NA	47257356	47271953	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_47257655_47258329_47258404_47258558_47258664_47260320_47260423_47260587_47260840_47264602_47264687_47264772_47264947_47266610_47266793_47270406_47270454_47270552_47270689_47271081_47271188_47271273_47271727_47271748
H1_mix_00047028	chr19	+	1193	6	NNC	ENSG00000105321.14	novel	2163	14	NA	NA	3907	131	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_4	74.4301014375232	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCTTGAACTGTGTTTC	3646	False	NA	15	True	ATTAAA	-15	NA	47270201	47273832	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_47270454_47270552_47270689_47271081_47271188_47271273_47271404_47272068_47272162_47273356
H1_mix_00047029	chr19	+	2437	5	FSM	ENSG00000178980.16	ENST00000598273.5	2437	5	0	0	0	0	multi-exon	FALSE	canonical	3	2940	junction_3	152.663641709478	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAATGTGCCTGTGAGGAG	195	False	NA	39	True	AATAAA	-17	NA	47778932	47784681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_47780750_47780863_47780918_47781107_47781183_47781289_47781389_47784289
H1_mix_00047030	chr19	+	1032	5	FSM	ENSG00000178980.16	ENST00000598956.5	1032	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	1362.16179288659	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTCACGATTCAATAAATAT	18	False	NA	6	True	NA	NA	NA	47780387	47784648	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_47780750_47780863_47781001_47781107_47781183_47781289_47781389_47784289
H1_mix_00047031	chr19	+	1976	2	FSM	ENSG00000268001.1	ENST00000602172.1	1969	2	-12	5	-12	-5	multi-exon	FALSE	canonical	2	2	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACTTACTGGTCTTCTC	NA	False	NA	NA	False	AATAAA	-18	NA	48255662	48258194	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_48255795_48256350
H1_mix_00047032	chr19	+	644	6	FSM	ENSG00000178150.10	ENST00000595408.5	634	6	-10	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	47.1737214983088	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGAAGACTGGAGATGCC	0	True	NA	NA	False	NA	NA	NA	48271371	48285881	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_48271450_48271726_48271829_48279730_48279809_48281551_48281690_48282370_48282498_48285760
H1_mix_00047039	chr19	+	1996	1	FSM	ENSG00000232871.8	ENST00000473944.1	940	1	375	-1431	375	206	mono-exon	FALSE	NA	NA	NA	NA	NA	2891	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTACAAAAATTAGCTGTGC	NA	False	NA	NA	False	NA	NA	NA	48680455	48682451	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_48680500_48682500
H1_mix_00047041	chr19	+	3099	2	FSM	ENSG00000176920.13	ENST00000425340.3	3116	2	17	0	17	0	multi-exon	FALSE	canonical	1	3	junction_1	0	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGGTTCTCTGAGAGCG	-2	True	NA	29	True	AATAAA	-38	NA	48695987	48705951	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_48696090_48702954
H1_mix_00047045	chr19	+	433	5	FSM	ENSG00000087088.21	ENST00000354470.7	433	5	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_2	811.297109572073	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCCAGCTGCCTTGGACT	46	False	NA	NA	False	NA	NA	NA	48954928	48961637	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_48954963_48955547_48955600_48956197_48956334_48960809_48960915_48961531
H1_mix_00047046	chr19	+	1358	5	FSM	ENSG00000087088.21	ENST00000293288.12	1358	5	0	0	0	0	multi-exon	FALSE	canonical	3	1783	junction_1	161.82706819318	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGCATCTGAGTCACTG	46	False	NA	17	True	AATAAA	-17	NA	48954928	48961798	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_48954963_48955547_48955600_48955686_48955834_48956197_48956334_48960809
H1_mix_00047047	chr19	+	546	2	FSM	ENSG00000183207.14	ENST00000595002.1	546	2	0	0	0	0	multi-exon	FALSE	canonical	3	1652	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACCCTGTGTATGTGTGG	689	False	NA	17	True	TATAAA	-18	NA	49015250	49015926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49015687_49015816
H1_mix_00047049	chr19	+	367	3	FSM	ENSG00000104863.12	ENST00000486217.2	367	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	9.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATACTAAGGCATCTTT	47	False	NA	NA	False	AGTAAA	-24	NA	49114423	49115489	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49114442_49114848_49114968_49115259
H1_mix_00047050	chr19	+	1057	5	FSM	ENSG00000104863.12	ENST00000469137.5	1057	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	6.05702071979286	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGTGTCTGTGTGTCTGT	89	False	NA	16	True	TTTAAA	-16	NA	49114465	49118460	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49114968_49115259_49115332_49116262_49116473_49117854_49118019_49118351
H1_mix_00047052	chr19	+	4633	29	NIC	ENSG00000177380.14	novel	4583	30	NA	NA	-82	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	25.2133751353183	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGCTTCCTTGTTGACT	40	False	NA	5	True	NA	NA	NA	49119461	49151021	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_49119723_49127858_49128114_49128366_49128469_49128847_49129013_49129379_49129455_49129992_49130068_49130377_49130600_49133000_49133148_49133236_49133372_49133795_49133880_49134033_49134166_49134638_49134702_49134835_49134916_49135778_49135924_49136723_49136912_49138204_49138428_49139667_49139832_49139960_49140089_49141419_49141514_49142033_49142116_49142803_49143005_49145942_49146006_49148082_49148259_49148665_49148764_49148992_49149169_49149256_49149326_49149546_49149719_49150079_49150152_49150235
H1_mix_00047053	chr19	+	633	2	FSM	ENSG00000104901.7	ENST00000594268.1	524	2	-120	11	-120	-11	multi-exon	FALSE	canonical	2	4	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTACATCTAACAACACCAT	1148	False	NA	-5	True	AATAAA	-8	NA	49361662	49375105	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49361907_49374716
H1_mix_00047054	chr19	+	2481	16	FSM	ENSG00000161618.10	ENST00000455361.6	2470	16	-11	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	58.7510756402714	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGCTGTGCTTCTGCGAG	-39	True	NA	-17	True	AATAAA	-14	NA	49453224	49470585	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49453422_49458485_49458589_49458959_49459087_49459669_49459849_49460821_49460900_49461618_49461801_49462569_49462756_49463853_49463950_49464126_49464264_49464416_49464523_49464631_49464763_49465737_49465906_49466081_49466284_49468380_49468567_49468863_49468987_49470305
H1_mix_00047057	chr19	+	584	4	FSM	ENSG00000142534.7	ENST00000596873.1	583	4	-1	0	0	0	multi-exon	FALSE	canonical	3	4871	junction_1	843.797105680954	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATTTTGGAATGTTCTC	-6	True	NA	NA	False	NA	NA	NA	49496430	49498251	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49496472_49497193_49497326_49497519_49497596_49497916
H1_mix_00047058	chr19	+	1912	2	FSM	ENSG00000104870.13	ENST00000596147.1	383	2	20	-1549	20	0	multi-exon	FALSE	canonical	3	13	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAATCAGTGTGTTCTCATC	7195	False	NA	17	True	AATATA	-16	NA	49506835	49526329	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49506925_49524506
H1_mix_00047060	chr19	+	2587	4	NIC	ENSG00000104870.13	novel	1559	6	NA	NA	13	0	intron_retention	FALSE	canonical	3	102	junction_1	46.9065264352651	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAATCAGTGTGTTCTCATC	-22	True	NA	17	True	AATATA	-16	NA	49513209	49526329	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_49514134_49514210_49514487_49524506_49525574_49526009
H1_mix_00047061	chr19	+	2119	5	NIC	ENSG00000104870.13	novel	1559	6	NA	NA	13	0	intron_retention	FALSE	canonical	1	1	junction_3	71.1231326644152	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGTTCTCATCATTT	-22	True	NA	21	True	AATATA	-20	NA	49513209	49526333	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_49513474_49513881_49514134_49514210_49514487_49524570_49525574_49526009
H1_mix_00047067	chr19	+	780	6	FSM	ENSG00000126457.22	ENST00000525616.1	780	6	0	0	0	0	multi-exon	FALSE	canonical	3	4181	junction_1	342.050639525787	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATAAAGGTGAGGGGGTG	10	True	NA	NA	False	NA	NA	NA	49677276	49685028	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49677317_49680486_49680589_49681909_49682066_49682195_49682260_49683926_49684070_49684753
H1_mix_00047068	chr19	+	1297	11	NNC	ENSG00000126457.22	novel	1328	11	NA	NA	0	10455	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	1432.70211837632	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATTCCTGGAACGCT	10	True	NA	NA	False	NA	NA	NA	49677276	49699484	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_49677317_49680486_49680589_49681909_49682066_49682195_49682260_49683926_49684070_49684753_49684842_49684921_49685038_49686092_49686244_49686604_49686727_49688161_49688448_49699455
H1_mix_00047069	chr19	+	463	4	FSM	ENSG00000126457.22	ENST00000527412.1	463	4	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_1	2210.17078274257	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGACCACGGTGAGCCCAG	2508	False	NA	NA	False	NA	NA	NA	49679774	49682249	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49679926_49680486_49680589_49681909_49682066_49682195
H1_mix_00047073	chr19	+	2933	20	FSM	ENSG00000169169.15	ENST00000392518.8	2910	20	-23	0	-17	0	multi-exon	FALSE	canonical	3	12	junction_2	81.452907727627	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTCTGCTATGCT	1497	False	NA	11	True	AATAAA	-16	NA	49691092	49713731	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49691341_49691820_49691954_49692238_49692394_49697325_49697466_49700683_49700856_49701316_49701419_49701496_49701635_49704709_49704788_49705006_49705115_49705213_49705299_49705908_49706105_49706230_49706414_49707517_49707624_49708722_49708840_49710319_49710485_49710722_49710858_49711808_49711962_49712735_49712850_49712971_49713065_49713419
H1_mix_00047074	chr19	+	2487	18	NIC	ENSG00000169169.15	novel	2783	19	NA	NA	-1	-20	combination_of_known_junctions	FALSE	canonical	2	14	junction_3	85.9869628808177	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCCAGCAGGCAGCTGG	-16	True	NA	NA	False	NA	NA	NA	49691108	49713606	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_49691341_49692238_49692394_49697325_49697466_49701316_49701419_49701496_49701635_49704709_49704788_49705006_49705115_49705213_49705299_49705908_49706105_49706230_49706414_49707517_49707624_49708722_49708840_49710319_49710485_49710722_49710858_49711808_49711962_49712735_49712850_49712971_49713065_49713419
H1_mix_00047077	chr19	+	2866	20	NIC	ENSG00000169169.15	novel	2910	20	NA	NA	1	0	intron_retention	FALSE	canonical	3	19	junction_1	93.2929143452814	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTCTGCTATGCT	12	True	NA	11	True	AATAAA	-16	NA	49691136	49713731	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_49691341_49691660_49691771_49692238_49692394_49697325_49697466_49700683_49700856_49701316_49701419_49701496_49701635_49704709_49704788_49705006_49705115_49705213_49705299_49705908_49706105_49706230_49706414_49707517_49707624_49708722_49708840_49710319_49710485_49710722_49710858_49711808_49711962_49712735_49712850_49712971_49713065_49713419
H1_mix_00047078	chr19	+	1433	11	NIC	ENSG00000169169.15	novel	2679	20	NA	NA	-1	-29	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	115.283823670106	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCCCTCACCGGCCTGCC	18	True	NA	NA	False	NA	NA	NA	49691142	49706044	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_49691341_49692238_49692394_49696481_49696603_49697325_49697466_49700683_49700856_49701316_49701419_49701496_49701635_49704709_49704788_49705006_49705115_49705213_49705299_49705908
H1_mix_00047084	chr19	+	996	10	FSM	ENSG00000104960.15	ENST00000594165.5	986	10	-10	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	415.808449489265	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGACAATGGCTTCGTGA	-11	True	NA	NA	False	NA	NA	NA	49850988	49858637	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49851131_49854405_49854544_49854651_49854735_49854830_49854889_49854969_49855078_49856974_49857131_49857692_49857783_49857903_49857978_49858056_49858115_49858548
H1_mix_00047085	chr19	+	1313	13	NIC	ENSG00000104960.15	novel	1438	13	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	92	junction_1	348.6953860065	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCCCCAATAAAGCCTTT	20	True	NA	-1	True	NA	NA	NA	49851019	49860712	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_49851097_49854405_49854544_49854651_49854735_49854830_49854889_49854969_49855078_49856974_49857131_49857692_49857783_49857903_49857978_49858056_49858115_49858548_49858654_49859985_49860184_49860267_49860337_49860613
H1_mix_00047087	chr19	+	522	6	FSM	ENSG00000104960.15	ENST00000601093.5	522	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	546.235626813191	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTTCTCTGCTCACTG	917	False	NA	29	True	AATAAA	-17	NA	49857906	49860742	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49857978_49858056_49858115_49858548_49858654_49860093_49860184_49860267_49860337_49860613
H1_mix_00047088	chr19	+	2833	4	FSM	ENSG00000142528.16	ENST00000445728.7	2833	4	0	0	0	0	multi-exon	TRUE	canonical	3	5	junction_1	33.7078955472189	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGAAAGTTTGTGCGCAT	-10	True	NA	3	True	AATAAA	-16	NA	50026004	50047167	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_50026123_50039160_50039288_50041729_50041820_50044669
H1_mix_00047090	chr19	+	3252	10	FSM	ENSG00000105357.20	ENST00000595016.1	4039	10	787	0	787	0	multi-exon	FALSE	canonical	3	59	junction_1	16.3163176673606	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATCTCTGTGGCTGTGTG	NA	False	NA	18	True	AATAAA	-16	NA	50285550	50310539	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_50286695_50289435_50289649_50290886_50291049_50292260_50292390_50293232_50293322_50293563_50293688_50301660_50301870_50307048_50307158_50309004_50309178_50309639
H1_mix_00047091	chr19	+	713	4	FSM	ENSG00000131408.15	ENST00000595730.5	713	4	0	0	0	0	multi-exon	FALSE	canonical	3	455	junction_1	4.98887651569859	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATCCCGAAGAGGAACCAG	-27	True	NA	NA	False	NA	NA	NA	50376456	50378155	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_50376577_50376718_50376827_50377586_50377649_50377732
H1_mix_00047094	chr19	+	3538	27	FSM	ENSG00000062822.16	ENST00000595904.6	3514	27	-24	0	0	0	multi-exon	FALSE	canonical	3	45	junction_14	164.727105331118	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGTGCTTTGTGGTCTCT	16	False	NA	24	True	AATAAA	-18	NA	50384322	50418014	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_50384391_50398850_50399054_50399370_50399485_50401777_50401925_50401998_50402125_50402204_50402374_50402453_50402536_50402611_50402742_50403052_50403220_50403492_50403598_50406181_50406323_50406406_50406518_50406982_50407175_50407326_50407416_50408706_50408902_50409121_50409236_50409518_50409667_50413425_50413522_50413741_50413880_50414814_50414991_50415437_50415591_50415723_50415827_50416395_50416529_50416609_50416724_50417044_50417098_50417171_50417270_50417841
H1_mix_00047097	chr19	+	601	3	FSM	ENSG00000269404.7	ENST00000599923.5	578	3	-23	0	-22	0	multi-exon	FALSE	canonical	3	26	junction_1	17	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCCTGGAGGCCCCGGGG	NA	False	NA	NA	False	NA	NA	NA	50418915	50422975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_50418986_50419945_50419974_50422472
H1_mix_00047098	chr19	+	3333	5	FSM	ENSG00000269404.7	ENST00000439922.6	3311	5	-22	0	-22	0	multi-exon	FALSE	canonical	2	11	junction_3	18.4577219612822	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACCTCCTGGGACCTTT	NA	False	NA	8	True	AATAAA	-20	NA	50418915	50431048	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_50418986_50419945_50419974_50422472_50422546_50423604_50423756_50428037
H1_mix_00047099	chr19	+	1460	6	FSM	ENSG00000269404.7	ENST00000270632.7	1443	6	-17	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	20.4587389640711	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCCTTTTGTCATGTCT	2	True	NA	21	True	NA	NA	NA	50418940	50428989	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_50418986_50419945_50419974_50422472_50422546_50422822_50423038_50423604_50423752_50428037
H1_mix_00047100	chr19	+	1285	8	ISM	ENSG00000086967.10	ENST00000357701.6	3604	28	25614	0	-5725	0	3prime_fragment	FALSE	canonical	2	7	junction_1	3.13635691430002	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGAGTGTCTGTCCTTC	NA	False	NA	13	True	AAAACA	-13	NA	50458505	50466321	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_50458755_50458917_50459007_50459110_50459307_50460039_50460180_50461541_50461702_50461899_50462037_50464345_50464533_50466194
H1_mix_00047101	chr19	+	4191	1	ISM	ENSG00000161671.17	ENST00000334976.11	9439	7	7514	2660	2931	-2660	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGAACCCTGGAGGCGGAG	1331	False	NA	NA	False	NA	NA	NA	50484020	50488211	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_50484000_50488200
H1_mix_00047102	chr19	+	702	4	ISM	ENSG00000235034.7	ENST00000458538.1	493	5	6251	-208	-2457	-3	3prime_fragment	FALSE	canonical	3	22	junction_3	5.43650214343336	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCATTTCTCTCTGCAA	2208	False	NA	5	True	TATAAA	-16	NA	50656038	50659303	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_50656123_50656225_50656347_50657988_50658129_50658946
H1_mix_00047103	chr19	+	1119	4	NNC	ENSG00000105472.14	novel	1375	4	NA	NA	-1456	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	9.93310961716756	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAGGGGCAGTGAAGGCA	NA	False	NA	17	True	AATAAA	-17	NA	50721907	50725708	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_50721961_50723904_50724092_50724409_50724602_50725021
H1_mix_00047105	chr19	+	536	3	FSM	ENSG00000105497.8	ENST00000596504.1	580	3	44	0	44	0	multi-exon	FALSE	canonical	3	13	junction_2	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATCCTGTTGAGGAGATT	56	False	NA	NA	False	NA	NA	NA	51571347	51581546	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_51571476_51573149_51573402_51581390
H1_mix_00047107	chr19	+	759	6	FSM	ENSG00000182310.15	ENST00000572160.5	759	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	8.16333265278342	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTCAACTCTAGATTG	9207	False	NA	-3	True	AATAAA	-4	NA	51702535	51705175	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_51702653_51703020_51703099_51703227_51703338_51704029_51704187_51704269_51704481_51705089
H1_mix_00047109	chr19	+	688	4	FSM	ENSG00000105568.18	ENST00000468280.5	688	4	0	0	0	0	multi-exon	FALSE	canonical	3	2685	junction_1	74.0915349790754	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTCACTTAGGAATTGA	69	False	NA	NA	False	NA	NA	NA	52190113	52211694	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_52190175_52201943_52202035_52205962_52206064_52211259
H1_mix_00047110	chr19	+	561	3	FSM	ENSG00000105568.18	ENST00000462047.1	561	3	0	0	0	0	multi-exon	FALSE	canonical	3	2470	junction_2	15.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAAGACTGTGAGGCCGA	1053	False	NA	NA	False	NA	NA	NA	52212491	52215841	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_52212834_52212954_52213111_52215778
H1_mix_00047117	chr19	+	945	6	FSM	ENSG00000160336.17	ENST00000610928.4	938	6	-9	2	0	-2	multi-exon	FALSE	canonical	0	0	junction_2	136.369204734793	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATATGTGTGTCCTTAAG	-3	True	NA	10	True	AATAAA	-20	NA	53431983	53450329	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_53432029_53445000_53445124_53446226_53446338_53447195_53447284_53449511_53449639_53449878
H1_mix_00047118	chr19	+	1538	6	FSM	ENSG00000160336.17	ENST00000651864.1	1538	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	140.52900056572	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAAACTTCCTAATATTT	-3	True	NA	NA	False	AATAAA	-19	NA	53431983	53461862	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_53432029_53445000_53445220_53446226_53446338_53447195_53447284_53449511_53449639_53460914
H1_mix_00047119	chr19	+	2417	5	NNC	ENSG00000160336.17	novel	3983	5	NA	NA	4	-3274	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	131.743121262554	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATAATCAAGTTGTGAAGT	10	True	NA	NA	False	NA	NA	NA	53431996	53454986	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_53433751_53446226_53446338_53447195_53447284_53449511_53449639_53454649
H1_mix_00047120	chr19	+	3199	6	Fusion	ENSG00000241015.2_ENSG00000160336.17	novel	4061	5	NA	NA	86	-3274	multi-exon	FALSE	canonical	0	0	junction_2	144.826240716246	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATAATCAAGTTGTGAAGT	9962	False	NA	NA	False	NA	NA	NA	53441948	53454986	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_+_53444362_53445000_53445124_53446226_53446338_53447195_53447284_53449511_53449639_53454649
H1_mix_00047125	chr19	+	1551	3	FSM	ENSG00000130844.19	ENST00000513929.6	1595	3	44	0	3	0	multi-exon	FALSE	canonical	1	2	junction_2	87	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTAATCTTCCCATATT	2	True	NA	NA	False	NA	NA	NA	53521026	53532972	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_53522085_53522616_53522685_53532547
H1_mix_00047139	chr19	+	2882	18	NIC	ENSG00000088038.19	novel	2818	18	NA	NA	4	-3	combination_of_known_junctions	FALSE	canonical	1	3	junction_7	134.055067959681	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACGGCTGGCAGCAGCGG	-12	True	NA	23	True	AATAAA	-10	NA	54137752	54155677	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_54137994_54142925_54143004_54143118_54143187_54143441_54143517_54143659_54143750_54144005_54144135_54144236_54144333_54145541_54145818_54145909_54146044_54146600_54146658_54148147_54148536_54148619_54148744_54149559_54149759_54152225_54152326_54152427_54152627_54152866_54153000_54153714_54153841_54155308
H1_mix_00047140	chr19	+	4357	17	FSM	ENSG00000088038.19	ENST00000617930.2	4349	17	-8	0	0	0	multi-exon	FALSE	canonical	3	17	junction_16	107.145272294208	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGGCAGCAGCGGCCTC	9	True	NA	27	True	AATAAA	-14	NA	54137773	54155681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_54137994_54142928_54143004_54143118_54143187_54143441_54143517_54143659_54143750_54144005_54144135_54144236_54144333_54145597_54145818_54145909_54146044_54146600_54146658_54148147_54148536_54148619_54148744_54149559_54149759_54152225_54152326_54152427_54152627_54152866_54153083_54153714
H1_mix_00047141	chr19	+	3971	17	FSM	ENSG00000088038.19	ENST00000358389.7	4118	17	147	0	147	0	multi-exon	FALSE	canonical	3	373	junction_9	37.1390966502956	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCTGGCAGCAGCGGCCT	3686	False	NA	26	True	AATAAA	-13	NA	54141542	54155680	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_54143004_54143118_54143187_54143441_54143517_54143659_54143750_54144005_54144135_54144236_54144333_54145597_54145818_54145909_54146044_54146600_54146658_54148147_54148536_54148619_54148744_54149559_54149759_54152225_54152326_54152427_54152627_54152866_54153000_54153714_54153841_54155308
H1_mix_00047143	chr19	+	1631	5	FSM	ENSG00000170889.14	ENST00000402367.5	1617	5	-14	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	3694.9172521181	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGTGGGGGTCTCTC	-3	True	NA	26	True	AATAAA	-20	NA	54200857	54207647	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_54200962_54201159_54201282_54201486_54201610_54206275_54206463_54206552
H1_mix_00047144	chr19	+	526	4	FSM	ENSG00000170889.14	ENST00000391751.7	510	4	-16	0	0	0	multi-exon	FALSE	canonical	3	311	junction_3	2837.48484087972	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGTGGGGGTCTCTC	-3	True	NA	26	True	AATAAA	-20	NA	54200857	54207647	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_54200889_54201159_54201282_54201486_54201610_54207397
H1_mix_00047146	chr19	+	1817	13	NIC	ENSG00000167614.14	novel	2088	14	NA	NA	3	-5	combination_of_known_splicesites	FALSE	canonical	2	2	junction_11	37.7612198190448	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGCAGCTGGGTCCTCCT	-7	True	NA	15	True	AATAAA	-16	NA	54415467	54436712	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_54415679_54419127_54419307_54421276_54421389_54422189_54422411_54426672_54426769_54429306_54429380_54429881_54429958_54430549_54430606_54430812_54430906_54431098_54431192_54435541_54435685_54436087_54436172_54436332
H1_mix_00047164	chr19	+	444	4	FSM	ENSG00000108107.15	ENST00000558131.1	444	4	0	0	0	0	multi-exon	FALSE	canonical	2	47	junction_2	2898.92474318784	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTCGACTGGGCCTCC	6	True	NA	33	True	AATAAA	-18	NA	55386349	55388373	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_55386439_55386569_55386675_55387929_55388049_55388242
H1_mix_00047165	chr19	+	5620	2	FSM	ENSG00000108107.15	ENST00000426763.3	5620	2	0	0	0	0	multi-exon	FALSE	canonical	3	6466	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCATGTGGTCTTGAAAA	6	True	NA	30	True	AATAAA	-32	NA	55386349	55392100	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_55386439_55386569
H1_mix_00047166	chr19	+	591	2	FSM	ENSG00000171425.10	ENST00000585995.1	591	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGGCGGCCCCACGGCT	-1	True	NA	NA	False	NA	NA	NA	55641030	55644990	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_55641184_55644552
H1_mix_00047168	chr19	+	1551	1	FSM	ENSG00000213015.9	ENST00000543039.2	1707	1	156	0	156	0	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTCAGGCTCTTCCTTGC	776	False	NA	14	True	AATAAA	-14	NA	55641918	55643469	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_55641900_55643500
H1_mix_00047170	chr19	+	2709	12	NNC	ENSG00000063245.15	novel	16219	11	NA	NA	-87	0	at_least_one_novel_splicesite	TRUE	canonical	3	32	junction_1	229.505144975549	504	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCCAGATTCCCATCTGT	629	False	NA	33	True	AATAAA	-23	NA	55675138	55695766	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_55675436_55677045_55677219_55678526_55678856_55685395_55685646_55688869_55688995_55689296_55689372_55689866_55689951_55691753_55692058_55692685_55692797_55692953_55693038_55694725_55694984_55695147
H1_mix_00047172	chr19	+	1936	5	NIC	ENSG00000167685.15	novel	562	3	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	136.930639376292	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGAGCTCTGTCTGGAGT	16	True	NA	22	True	AATAAA	-22	NA	56141730	56160893	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_56141795_56146246_56146421_56146889_56147209_56158493_56158603_56159623
H1_mix_00047187	chr19	+	360	3	FSM	ENSG00000083844.10	ENST00000594126.1	359	3	-1	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	10	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGAGGTGATGCTGGAAAA	-1	True	NA	NA	False	NA	NA	NA	57191499	57193958	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57191528_57191698_57191947_57193874
H1_mix_00047197	chr19	+	3674	4	FSM	ENSG00000105136.22	ENST00000347466.10	3654	4	-20	0	1	0	multi-exon	FALSE	canonical	3	6	junction_3	21.4527905462721	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATTAGCTTTTTATTGC	0	True	NA	NA	False	AATAAA	-24	NA	57487720	57496097	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57487984_57490146_57490186_57491467_57491598_57492855
H1_mix_00047198	chr19	+	800	5	NNC	ENSG00000105136.22	novel	3742	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_4	23.3130864537495	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTTATGACCATTTCCAG	-12	True	NA	20	True	AATAAA	-17	NA	57487749	57494665	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_57487984_57490146_57490186_57491467_57491598_57492112_57492212_57494367
H1_mix_00047201	chr19	+	5049	4	NIC	ENSG00000171649.12	novel	4291	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_1	64.3238334954903	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATGTTGAAACTTTACTC	NA	False	NA	18	True	AATAAA	-18	NA	57583609	57593890	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_57584613_57584951_57584991_57588538_57588666_57590010
H1_mix_00047202	chr19	+	401	2	ISM	ENSG00000171649.12	ENST00000599456.1	2860	3	9	3795	9	-20	5prime_fragment	FALSE	canonical	3	72	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGATGAGGCTCAGAGACT	118	False	NA	NA	False	NA	NA	NA	57584268	57588595	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_57584613_57588538
H1_mix_00047206	chr19	+	2541	3	FSM	ENSG00000121417.14	ENST00000347302.7	2472	3	-111	42	-110	0	multi-exon	FALSE	canonical	3	8	junction_1	41.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAATAATAAAAGCATTAT	NA	False	NA	-12	True	NA	NA	NA	57633056	57642737	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57633437_57634628_57634756_57640703
H1_mix_00047209	chr19	+	603	3	Fusion	ENSG00000269343.9_ENSG00000198466.12	novel	1670	4	NA	NA	2	-9	multi-exon	FALSE	canonical	3	12	junction_2	22.5	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGAGTGCCTGGGGAG	-7	True	NA	14	True	CATAAA	-14	NA	57819722	57854099	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_+_57819946_57820493_57820550_57853775
H1_mix_00047216	chr19	+	539	3	FSM	ENSG00000198131.15	ENST00000594303.5	539	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	12	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAAGCCCAGGAGGTTTG	25	False	NA	NA	False	NA	NA	NA	58228940	58230072	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_58229257_58229467_58229571_58229952
H1_mix_00047218	chr19	+	736	7	NNC	ENSG00000198131.15	novel	555	7	NA	NA	0	-2648	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	90.8288989743291	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCATTTGTGGTATGTTGT	381	False	NA	12	True	AATAAA	-19	NA	58229467	58274599	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_58229571_58230393_58230463_58243964_58244057_58246300_58246428_58246710_58246795_58271749_58271777_58274365
H1_mix_00047220	chr19	+	945	7	NIC	ENSG00000198131.15	novel	895	7	NA	NA	0	15	combination_of_known_junctions	FALSE	canonical	2	5	junction_6	96.3375143268014	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAACATTTTTGAATGGAA	381	False	NA	63	True	AAAAAG	-23	NA	58229467	58277510	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_58229571_58230393_58230498_58243964_58244057_58246300_58246428_58246710_58246795_58276322_58276430_58277182
H1_mix_00047232	chr19	+	1552	10	FSM	ENSG00000130726.12	ENST00000597136.1	1552	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	941.8641090943	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGGCTGGTTGGGGGACT	3543	False	NA	41	True	AATAAA	-21	NA	58548293	58550722	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_58548409_58548485_58548593_58548739_58548777_58548885_58548911_58548987_58549241_58549330_58549651_58549736_58549861_58549948_58550036_58550146_58550285_58550376
H1_mix_00047233	chr19	+	714	4	FSM	ENSG00000130726.12	ENST00000598355.1	714	4	0	0	0	0	multi-exon	FALSE	canonical	3	2943	junction_1	183.61251470299	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCATCCCCCAGTTCCTCA	1305	False	NA	-10	True	NA	NA	NA	58549644	58550649	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_58549861_58549948_58550036_58550146_58550285_58550376
H1_mix_00047234	chr19	-	6471	1	FSM	ENSG00000282458.1	ENST00000633719.1	4412	1	32	-2091	0	929	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGCCCAGCCTCTGTGAT	4472	False	NA	NA	False	NA	NA	NA	66492	60021	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_60000_66500
H1_mix_00047235	chr19	-	387	2	FSM	ENSG00000282458.1	ENST00000632496.1	387	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGAGTGCATTAACTCA	4544	False	NA	NA	False	TATAAA	-16	NA	66420	65821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_66134_66345
H1_mix_00047237	chr19	-	5523	7	Fusion	ENSG00000282508.2_ENSG00000282416.1	novel	754	5	NA	NA	-66	472	intron_retention	TRUE	canonical	0	0	junction_2	26.2593898549748	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGGGAGTGCAGAGGGA	NA	False	NA	NA	False	AAAAAG	-9	NA	206012	196837	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_-_199175_199607_199905_200098_201663_201755_201814_203874_204066_204843_205077_205169
H1_mix_00047238	chr19	-	736	2	FSM	ENSG00000282508.2	ENST00000631764.1	736	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCCGCCTGCCAGTGGCC	NA	False	NA	NA	False	NA	NA	NA	205459	201216	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_201663_205169
H1_mix_00047243	chr19	-	3415	14	NNC	ENSG00000105556.12	novel	2769	14	NA	NA	300	0	intron_retention	FALSE	canonical	3	6	junction_13	68.4341345326349	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCCTTGTGGTGGATCGG	328	False	NA	-3	True	ATTAAA	-18	NA	344478	305572	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_306712_307118_307537_308576_308666_308800_308926_311844_311940_312190_312273_313491_313644_325634_325705_326506_326599_327132_327257_327863_327990_334399_334543_336082_336174_343809
H1_mix_00047244	chr19	-	3849	13	NNC	ENSG00000105556.12	novel	2769	14	NA	NA	300	0	intron_retention	FALSE	canonical	2	13	junction_12	69.1163973951832	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCCTTGTGGTGGATCGG	328	False	NA	-3	True	ATTAAA	-18	NA	344478	305572	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_306712_307118_307537_308576_308666_308800_308926_311844_311940_312190_312273_313491_313644_325634_325705_326506_326599_327132_327257_327863_327990_334399_334543_343284
H1_mix_00047245	chr19	-	2767	14	NIC	ENSG00000105556.12	novel	2769	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	24	junction_3	67.0092283673714	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCCTTGTGGTGGATCGG	-9	True	NA	-3	True	ATTAAA	-18	NA	344815	305572	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_306712_307118_307537_308576_308666_308821_308926_311844_311940_312190_312273_313491_313644_325634_325705_326506_326599_327132_327257_327863_327990_334399_334543_336082_336174_344773
H1_mix_00047247	chr19	-	707	4	FSM	ENSG00000267751.6	ENST00000688427.1	677	4	8	-38	8	38	multi-exon	FALSE	canonical	3	5	junction_1	35.9753001686188	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATATCCACAGCCAAAGAC	15	True	NA	NA	False	NA	NA	NA	571745	562321	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_562654_567455_567625_571439_571597_571696
H1_mix_00047250	chr19	-	2291	8	NNC	ENSG00000129951.19	novel	2306	8	NA	NA	367	62299	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	213.786084196138	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCGCACGAGGCCGTCAA	2209	False	NA	NA	False	NA	NA	NA	821585	750188	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_750217_812489_813896_814433_814608_814691_814750_814885_815082_815185_815328_815665_815852_821484
H1_mix_00047251	chr19	-	1739	8	FSM	ENSG00000198858.10	ENST00000587975.2	1765	8	26	0	0	0	multi-exon	FALSE	canonical	3	4	junction_7	242.147197601216	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGGGCTATGTGTGTTTT	-26	True	NA	-8	True	AATAAA	-16	NA	913219	896503	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_897541_899439_899496_899600_899687_900060_900147_900828_900953_901421_901547_901975_902068_913086
H1_mix_00047253	chr19	-	2580	10	FSM	ENSG00000182087.14	ENST00000333175.9	2581	10	0	1	0	0	multi-exon	FALSE	canonical	3	23	junction_1	439.942280164732	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCACTGCGCTGTGTGTGTG	17	True	NA	28	True	AATAAA	-18	NA	1021115	1009651	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1010896_1011366_1011500_1011579_1011664_1011740_1011799_1011891_1011993_1012065_1012189_1012462_1012574_1013240_1013341_1014191_1014474_1020771
H1_mix_00047254	chr19	-	2615	11	NIC	ENSG00000182087.14	novel	2687	11	NA	NA	13	0	intron_retention	FALSE	canonical	3	285	junction_4	349.035012570372	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGCGCTGTGTGTGT	30	False	NA	27	True	AATAAA	-17	NA	1021102	1009652	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_1010896_1011095_1011196_1011366_1011500_1011579_1011613_1011740_1011799_1011891_1011993_1012065_1012189_1012462_1012574_1013240_1013341_1014191_1014474_1020771
H1_mix_00047256	chr19	-	418	4	FSM	ENSG00000182087.14	ENST00000586250.1	418	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	589.264701886078	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCATGTCCAGCGTGAAGG	6828	False	NA	NA	False	NA	NA	NA	1014304	1012112	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1012189_1012462_1012574_1013240_1013359_1014191
H1_mix_00047259	chr19	-	1101	8	FSM	ENSG00000099817.12	ENST00000586746.5	1096	8	0	-5	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1416.17923747422	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTGGCTTCCGAGAGACCC	2	True	NA	0	True	AATAAA	-22	NA	1095354	1086573	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1086989_1089471_1089552_1089883_1089963_1090086_1090146_1090907_1090989_1091791_1091908_1093903_1094079_1095258
H1_mix_00047260	chr19	-	1295	8	FSM	ENSG00000099817.12	ENST00000215587.11	1286	8	0	-9	0	-6	multi-exon	FALSE	canonical	1	2	junction_2	1414.70843610395	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAAGGTTTCCAGCAGGT	-18	True	NA	NA	False	AATAAA	-28	NA	1095374	1088153	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1088721_1089471_1089574_1089883_1089963_1090086_1090146_1090907_1090989_1091791_1091908_1093903_1094079_1095258
H1_mix_00047261	chr19	-	756	2	FSM	ENSG00000099817.12	ENST00000586215.1	756	2	0	0	0	0	multi-exon	FALSE	canonical	3	3537	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTGGGGTCCGGGTCTCC	5426	False	NA	NA	False	NA	NA	NA	1089930	1088423	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1088721_1089471
H1_mix_00047263	chr19	-	4453	29	FSM	ENSG00000064932.16	ENST00000438103.6	4537	29	83	1	83	0	multi-exon	FALSE	canonical	1	2	junction_28	13.5853312248835	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACGGAGTCTGCTCCTCA	1459	False	NA	-7	True	AATATA	-19	NA	1132138	1107637	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1108705_1108778_1108970_1109134_1109212_1109291_1109424_1109505_1109599_1109682_1109778_1110744_1110889_1111018_1111094_1111505_1111615_1111995_1112068_1112188_1112302_1112401_1112538_1112817_1112950_1113534_1113705_1114230_1114423_1116020_1116104_1116828_1116927_1117322_1117500_1119010_1119165_1119515_1119622_1119905_1120024_1122138_1122283_1122467_1122559_1122657_1122792_1122893_1123046_1123533_1123640_1123941_1124023_1127603_1127766_1132089
H1_mix_00047264	chr19	-	3357	11	FSM	ENSG00000099625.14	ENST00000648750.1	3357	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	29.7213727812159	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGCTTGCTCCGGGTTT	NA	False	NA	-19	True	TATAAA	-14	NA	1238027	1228286	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1230143_1231100_1231276_1233425_1233637_1234190_1234332_1234570_1234743_1235000_1235146_1235336_1235391_1235500_1235566_1235778_1235919_1235995_1236122_1237755
H1_mix_00047265	chr19	-	834	6	FSM	ENSG00000099625.14	ENST00000215376.7	834	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	37.3384520300454	1979	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCAGGCGAGGCCAGCT	190	False	NA	NA	False	NA	NA	NA	1237820	1234646	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1234743_1235000_1235343_1235500_1235566_1235778_1235919_1235995_1236122_1237755
H1_mix_00047266	chr19	-	2127	1	FSM	ENSG00000279488.1	ENST00000624592.1	2127	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6081	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCATGCCAGAAGCACCC	3855	False	NA	NA	False	NA	NA	NA	1374364	1372237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1372200_1374400
H1_mix_00047267	chr19	-	4651	3	FSM	ENSG00000248015.7_ENSG00000130005.13	ENST00000501448.5	3571	3	-1080	0	-1080	0	multi-exon	FALSE	canonical	1	4	junction_2	4	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAAATAATAAAT	3982	False	NA	NA	False	NA	NA	NA	1397547	1392169	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1393607_1393887_1394358_1394803
H1_mix_00047270	chr19	-	3338	1	FSM	ENSG00000119559.17	ENST00000592486.1	2314	1	-53	-971	-53	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGACGGTGTCGTCCTTAC	3011	False	NA	-3	True	ATTAAA	-18	NA	1476538	1473200	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1473200_1476500
H1_mix_00047271	chr19	-	1278	3	FSM	ENSG00000119559.17	ENST00000586564.5	1265	3	0	-13	0	0	multi-exon	FALSE	canonical	3	54	junction_2	187	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTGAGCGGCTCCGTC	16	True	NA	7	True	CATAAA	-33	NA	1479181	1474154	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1475259_1478773_1478906_1479139
H1_mix_00047272	chr19	-	1410	3	FSM	ENSG00000119559.17	ENST00000427685.2	1410	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	176.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTGAGCGGCTCCGTC	-19	True	NA	7	True	CATAAA	-33	NA	1479216	1474154	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1475259_1478653_1478906_1479162
H1_mix_00047274	chr19	-	1545	3	FSM	ENSG00000119559.17	ENST00000651077.1	1524	3	0	-21	0	0	multi-exon	FALSE	canonical	3	11	junction_1	173.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTGAGCGGCTCCGTC	-18	True	NA	7	True	CATAAA	-33	NA	1479215	1474154	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1475515_1478773_1478906_1479162
H1_mix_00047275	chr19	-	1728	4	ISM	ENSG00000185761.11	ENST00000590440.5	1602	12	3717	-838	3	-7	3prime_fragment	FALSE	canonical	2	4	junction_2	6.84754619472471	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTAAGTTCTGGGTGTGT	6165	False	NA	NA	False	TTTAAA	-11	NA	1507419	1505028	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_1506317_1506589_1506662_1506738_1506929_1507241
H1_mix_00047276	chr19	-	735	8	FSM	ENSG00000185761.11	ENST00000586272.5	735	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	3.75798469656169	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTACCTGCCCCGCCCT	-1	True	NA	NA	False	NA	NA	NA	1513019	1507997	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1508110_1508442_1508571_1510149_1510259_1510367_1510429_1510638_1510731_1510844_1510918_1511624_1511728_1512962
H1_mix_00047277	chr19	-	5711	8	NNC	ENSG00000071655.18	novel	5678	7	NA	NA	0	42991	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	333.115105435625	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGCCCAGGCGTGGTGGCT	5	True	NA	NA	False	NA	NA	NA	1592865	1530604	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_1530638_1573595_1578159_1578334_1578539_1581091_1581270_1582621_1582713_1584539_1584678_1585054_1585215_1592521
H1_mix_00047278	chr19	-	433	4	NNC	ENSG00000127540.12	novel	533	4	NA	NA	0	66564	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2218.3526921269	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGCCCAGGCGTGGTGGCT	7	True	NA	NA	False	NA	NA	NA	1605443	1530604	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_1530638_1598048_1598216_1599411_1599561_1605359
H1_mix_00047279	chr19	-	1002	7	FSM	ENSG00000267059.2	ENST00000585937.1	1002	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	1559.55666777453	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGTGCTGCGGGGCCACG	5	True	NA	NA	False	NA	NA	NA	1605445	1578338	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1578539_1581091_1581270_1582621_1582713_1584539_1584678_1585054_1585215_1599411_1599561_1605359
H1_mix_00047281	chr19	-	2314	19	NIC	ENSG00000071564.17	novel	4735	19	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	195	junction_1	267.561882769409	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGCAGTCCCCGGGTT	3973	False	NA	-10	True	AATAAA	-19	NA	1650287	1609292	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_1609600_1611703_1611850_1615284_1615521_1615685_1615822_1619110_1619235_1619315_1619475_1619779_1619854_1620967_1621047_1621132_1621192_1621837_1621971_1622053_1622224_1622312_1622416_1623950_1624001_1625575_1625709_1627358_1627427_1632037_1632117_1632331_1632406_1646354_1646428_1650176
H1_mix_00047282	chr19	-	3585	20	FSM	ENSG00000071564.17	ENST00000453954.6	3585	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	520.335040158378	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGCAGTCCCCGGGTT	8	True	NA	-10	True	AATAAA	-19	NA	1652591	1609292	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1610501_1611703_1611850_1612206_1612431_1615685_1615822_1619110_1619235_1619315_1619475_1619779_1619854_1620967_1621047_1621132_1621192_1621837_1621971_1622053_1622224_1622312_1622416_1623950_1624001_1625575_1625709_1627358_1627427_1631950_1632117_1632331_1632406_1646354_1646428_1650176_1650291_1652299
H1_mix_00047287	chr19	-	2779	16	FSM	ENSG00000071564.17	ENST00000395423.7	2779	16	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_13	298.529998492614	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTATTCTTCTAAAGCCAC	-5	True	NA	-127	True	NA	NA	NA	1652604	1611248	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1611850_1615284_1615822_1619110_1619235_1619315_1619475_1619779_1619854_1620967_1621047_1621132_1621192_1621837_1621971_1622053_1622224_1622312_1622416_1623950_1624001_1625575_1625709_1627358_1627427_1646354_1646428_1650176_1650288_1652299
H1_mix_00047292	chr19	-	2825	9	ISM	ENSG00000130270.16	ENST00000310127.10	5095	29	21388	-215	-71	215	3prime_fragment	FALSE	canonical	3	6	junction_7	10.6997371463041	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCAAGAAAGTTTATAAATT	NA	False	NA	NA	False	ATTAAA	-37	NA	1790888	1781859	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_1783271_1784818_1784947_1785158_1785298_1785468_1785709_1787102_1787187_1788896_1789121_1789360_1789728_1789889_1789990_1790756
H1_mix_00047294	chr19	-	887	5	FSM	ENSG00000130270.16	ENST00000526847.1	887	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	6.17960354715414	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGACACGGCGGGACCCGCC	28	False	NA	NA	False	NA	NA	NA	1790817	1785557	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1785709_1787102_1787187_1788896_1789121_1789360_1789728_1790756
H1_mix_00047295	chr19	-	629	4	ISM	ENSG00000130270.16	ENST00000531925.5	5237	29	1	27465	1	-2374	5prime_fragment	FALSE	canonical	3	10	junction_2	1.69967317119759	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCGATAGTTTTCTTTTT	-12	True	NA	NA	False	NA	NA	NA	1812275	1809541	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_1809735_1810621_1810684_1811600_1811885_1812185
H1_mix_00047296	chr19	-	1894	12	FSM	ENSG00000079313.15	ENST00000643515.1	1894	12	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_11	21.0940436542155	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGGCCGAGGCAGCCCA	-1	True	NA	NA	False	AATAAA	-17	NA	1822044	1815969	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1816155_1816224_1816346_1816430_1816570_1816697_1816814_1817218_1817330_1817706_1817781_1818481_1818596_1818705_1818844_1819017_1819132_1819933_1820058_1820263_1820396_1821518
H1_mix_00047298	chr19	-	1573	6	NNC	ENSG00000129968.17	novel	1781	6	NA	NA	0	8345	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	255.56181248379	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCTAATCTGGGTTTG	0	True	NA	NA	False	NA	NA	NA	1885496	1868464	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_1868500_1876977_1877426_1877507_1877688_1879920_1880116_1881234_1881805_1885351
H1_mix_00047301	chr19	-	798	5	FSM	ENSG00000099875.16	ENST00000589441.5	803	5	0	5	0	1	multi-exon	FALSE	canonical	2	36	junction_1	526.687941289717	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGCCTGAGTTTTAGTTT	9402	False	NA	-17	True	AATAAA	-17	NA	2041842	2037469	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2037830_2039630_2039857_2040133_2040178_2041039_2041205_2041839
H1_mix_00047302	chr19	-	4094	4	FSM	ENSG00000099875.16	ENST00000587416.5	4093	4	0	-1	0	1	multi-exon	FALSE	canonical	3	1142	junction_2	101.301530097033	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGCCTGAGTTTTAGT	8568	False	NA	-19	True	AATAAA	-15	NA	2042676	2037471	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2041205_2041839_2042035_2042426_2042523_2042606
H1_mix_00047306	chr19	-	544	2	FSM	ENSG00000172081.14	ENST00000592143.2	558	2	14	0	14	0	multi-exon	FALSE	canonical	1	2	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTCGCTGGGGAGCCCC	13	True	NA	NA	False	NA	NA	NA	2085328	2073034	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2073425_2085174
H1_mix_00047307	chr19	-	2868	5	FSM	ENSG00000065000.19	ENST00000585652.5	4433	5	1565	0	71	0	multi-exon	FALSE	canonical	3	382	junction_2	29.9947912144759	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCACATGGGTCTTCTG	8440	False	NA	-15	True	AATAAA	-15	NA	2111258	2100994	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2102269_2108686_2108767_2109085_2109959_2110135_2110225_2110706
H1_mix_00047308	chr19	-	4015	25	FSM	ENSG00000065000.19	ENST00000644728.1	4015	25	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_9	64.1151172804736	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCCACATGGGTCTTCT	1335	False	NA	-16	True	AATAAA	-14	NA	2129121	2100995	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2102269_2108686_2108767_2109085_2109208_2109872_2109959_2110135_2110225_2110706_2110897_2111284_2111333_2111678_2111829_2112859_2112932_2113335_2113414_2114124_2114303_2114747_2114822_2115218_2115419_2115537_2115614_2116206_2116279_2116604_2116747_2117221_2117368_2118600_2118833_2120861_2121093_2121162_2121312_2121733_2121880_2123357_2123407_2123829_2123880_2127151_2127202_2129089
H1_mix_00047311	chr19	-	1226	7	NNC	ENSG00000104886.12	novel	1218	6	NA	NA	-10	86854	intron_retention	FALSE	non_canonical	0	0	junction_1	649.960682571561	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCAGGCATGGTGGCACG	6	True	NA	NA	False	NA	NA	NA	2236308	2143229	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_2143259_2233152_2233906_2233997_2234062_2234149_2234241_2235761_2235829_2235922_2235991_2236154
H1_mix_00047315	chr19	-	1978	1	FSM	ENSG00000220008.3	ENST00000585527.1	2241	1	199	64	199	-64	mono-exon	FALSE	NA	NA	NA	NA	NA	920	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTCATCAGCATGCGT	NA	False	NA	-73	True	NA	NA	NA	2291825	2289847	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2289800_2291800
H1_mix_00047316	chr19	-	486	4	NNC	ENSG00000130332.15	novel	621	4	NA	NA	0	16809	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1827.92584337792	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGACATGGCCAAGGCTG	3964	False	NA	NA	False	NA	NA	NA	2328477	2304710	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_2304736_2321520_2321823_2324124_2324193_2328386
H1_mix_00047317	chr19	-	621	4	FSM	ENSG00000130332.15	ENST00000585395.6	621	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	1942.2609391005	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTGAGCCCCGAATCT	3964	False	NA	-15	True	AATAAA	-15	NA	2328477	2321520	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2321823_2324124_2324193_2325979_2326140_2328386
H1_mix_00047318	chr19	-	4675	13	NNC	ENSG00000176619.13	novel	4634	12	NA	NA	0	53393	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	362.545016361953	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGAGAGAAATCAGCATGA	-5	True	NA	NA	False	AAAAAG	-4	NA	2456959	2374244	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_2374286_2428165_2430953_2431547_2431659_2431782_2431903_2432415_2432524_2433825_2434106_2434294_2434516_2434787_2434914_2435000_2435172_2438162_2438289_2438374_2438532_2444403_2444541_2456669
H1_mix_00047319	chr19	-	769	5	FSM	ENSG00000176619.13	ENST00000532465.1	769	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	553.265476511954	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGCGCGGACTCCGTTTCC	3248	False	NA	NA	False	NA	NA	NA	2433899	2427637	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2427994_2431547_2431659_2431782_2431903_2432415_2432524_2433825
H1_mix_00047320	chr19	-	4110	3	FSM	ENSG00000104969.11	ENST00000679132.1	4097	3	0	-13	0	1	multi-exon	FALSE	canonical	3	698	junction_2	21	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTCTTCGTGTTGACCT	2180	False	NA	-3	True	AATAAA	-18	NA	2760461	2754713	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2755934_2757336_2757458_2757692
H1_mix_00047322	chr19	-	3760	11	FSM	ENSG00000104969.11	ENST00000677731.1	3744	11	0	-16	0	1	multi-exon	FALSE	canonical	3	649	junction_10	78.5025477293572	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTCTTCGTGTTGACCT	1	True	NA	-3	True	AATAAA	-18	NA	2783327	2754713	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2755934_2757336_2757458_2757692_2759295_2761459_2761523_2762505_2762645_2763652_2763758_2765185_2765286_2767135_2767221_2767579_2767687_2768968_2769092_2783232
H1_mix_00047323	chr19	-	637	7	FSM	ENSG00000104969.11	ENST00000589251.5	637	7	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_6	385.577813158382	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGATGGGGTGAGTGCCT	10	True	NA	NA	False	NA	NA	NA	2783270	2763662	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2763758_2765185_2765286_2767135_2767221_2767579_2767687_2768968_2769092_2782569_2782659_2783232
H1_mix_00047324	chr19	-	2845	21	NNC	ENSG00000065717.15	novel	2812	20	NA	NA	0	37434	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	51.9844928800888	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTCAGCGTTCTATTT	19	True	NA	NA	False	NA	NA	NA	3029280	2960204	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_2960237_2997645_2997956_3000646_3000724_3002352_3002504_3005436_3005585_3005720_3005969_3006419_3006670_3008868_3008946_3009541_3009703_3011021_3011161_3013668_3013819_3014569_3014615_3015652_3015761_3017839_3017860_3019282_3019467_3019698_3019774_3025019_3025083_3027828_3027874_3028318_3028383_3028705_3028804_3028880
H1_mix_00047325	chr19	-	2777	19	NIC	ENSG00000065717.15	novel	2812	20	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_12	53.716218209824	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGCACTTCTCTCTCGGGC	6361	False	3029299	-25	True	AATAAA	-15	NA	3029262	2997643	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_2997956_3000646_3000724_3002352_3002504_3005436_3005585_3005720_3005969_3006419_3006670_3008868_3008946_3009541_3009703_3011021_3011161_3013668_3013819_3014569_3014615_3015652_3015761_3019282_3019467_3019698_3019774_3025019_3025083_3027828_3027874_3028318_3028383_3028705_3028804_3028880
H1_mix_00047326	chr19	-	2850	20	FSM	ENSG00000065717.15	ENST00000590536.5	2344	20	-302	-204	-35	0	multi-exon	FALSE	canonical	3	58	junction_14	40.7385420561937	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGCACTTCTCTCTCGGGC	-16	True	NA	-25	True	AATAAA	-15	NA	3029315	2997643	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2997956_3000646_3000724_3002352_3002504_3005436_3005585_3005720_3005969_3006419_3006670_3008868_3008946_3009541_3009703_3011021_3011161_3013668_3013819_3014569_3014615_3015652_3015761_3017839_3017860_3019282_3019467_3019698_3019774_3025019_3025083_3027828_3027874_3028318_3028383_3028705_3028804_3028880
H1_mix_00047329	chr19	-	1082	5	FSM	ENSG00000104964.15	ENST00000587393.5	1082	5	0	0	0	0	multi-exon	FALSE	canonical	3	2362	junction_2	242.721033287188	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCGACCCAGGATTCCCC	5358	False	NA	-82	True	NA	NA	NA	3057748	3053211	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3054041_3054119_3054195_3055663_3055727_3056311_3056357_3057678
H1_mix_00047330	chr19	-	1783	1	FSM	ENSG00000161091.14	ENST00000585788.1	1769	1	0	-14	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCAGAAACCTCCTGCCC	7962	False	NA	NA	False	AATAAA	-35	NA	3540043	3538260	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3538300_3540000
H1_mix_00047331	chr19	-	1028	5	FSM	ENSG00000161091.14	ENST00000398558.8	1014	5	0	-14	0	0	multi-exon	TRUE	canonical	3	11	junction_2	87.06427223609	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCAGAAACCTCCTGCCC	8185	False	NA	NA	False	AATAAA	-35	NA	3546358	3538260	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3538757_3542775_3542978_3544808_3544940_3546073_3546169_3546254
H1_mix_00047332	chr19	-	714	2	FSM	ENSG00000161091.14	ENST00000589157.1	714	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGGAACGAGACTCAGC	7798	False	NA	NA	False	NA	NA	NA	3543382	3538649	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3538757_3542775
H1_mix_00047333	chr19	-	1511	9	NIC	ENSG00000161091.14	novel	777	7	NA	NA	-7	-12	combination_of_known_junctions	FALSE	canonical	2	12	junction_3	67.6147173328411	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGCCGCCACCGTGCTGGA	526	False	NA	NA	False	NA	NA	NA	3557570	3538661	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_3538757_3544808_3544940_3546073_3546169_3547271_3547365_3547454_3547548_3547847_3548031_3548122_3548268_3550983_3551195_3557105
H1_mix_00047334	chr19	-	2566	12	NNC	ENSG00000161091.14	novel	2137	10	NA	NA	0	-12	intron_retention	FALSE	canonical	1	1	junction_2	66.5383751823023	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGCCGCCACCGTGCTGGA	-4	True	NA	NA	False	NA	NA	NA	3557586	3538661	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_3538757_3542775_3542978_3544066_3544733_3544808_3544940_3546073_3546169_3546254_3546426_3547271_3547365_3547454_3547548_3547847_3548031_3548122_3548268_3550983_3551195_3557105
H1_mix_00047339	chr19	-	4948	16	NIC	ENSG00000186111.11	novel	2289	17	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	3	16	junction_3	52.0970888502099	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCGCCTGTTTGCCTTTCT	10	True	NA	31	True	AATAAA	-14	NA	3700465	3630183	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_3633170_3638883_3639017_3641704_3641810_3643242_3643382_3644086_3644252_3645973_3646059_3647337_3647387_3648624_3648709_3651825_3652032_3653289_3653590_3656404_3656558_3660965_3661084_3661870_3662002_3664821_3664915_3667321_3667354_3700296
H1_mix_00047340	chr19	-	541	2	FSM	ENSG00000011132.12	ENST00000586991.1	541	2	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGGTGGCCACGCCAC	9796	False	NA	NA	False	NA	NA	NA	3751894	3751249	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3751330_3751433
H1_mix_00047341	chr19	-	3197	16	NNC	ENSG00000167658.16	novel	3158	15	NA	NA	0	85817	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2016.61764568519	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGGGCCCAATGGCTCA	-1	True	NA	NA	False	NA	NA	NA	3985463	3890238	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_3890281_3976058_3976748_3977214_3977348_3977427_3977611_3977818_3978173_3979328_3979437_3979807_3980067_3980513_3980710_3980840_3980980_3981338_3981453_3981946_3982053_3982245_3982425_3982806_3983019_3983109_3983292_3984135_3984351_3985377
H1_mix_00047344	chr19	-	1559	9	NNC	ENSG00000077463.15	novel	1600	8	NA	NA	0	7687	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	24.8985441341457	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCAGGCGTGGTGGCGC	58	False	NA	NA	False	NA	NA	NA	4182500	4166421	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_4166445_4174109_4174947_4175027_4175152_4175679_4175761_4175841_4175938_4177078_4177139_4179103_4179287_4180781_4180910_4182473
H1_mix_00047345	chr19	-	1057	7	FSM	ENSG00000077463.15	ENST00000595670.5	1057	7	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	13.2748718344933	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGCCAGCCCCAAACGGGA	24	False	NA	NA	False	NA	NA	NA	4182534	4174703	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4174947_4175027_4175152_4175679_4175938_4177078_4177139_4179103_4179287_4180781_4180910_4182473
H1_mix_00047346	chr19	-	812	7	NIC	ENSG00000077463.15	novel	1473	7	NA	NA	6	-19	combination_of_known_junctions	FALSE	canonical	3	6	junction_6	29.5338788512447	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCACAACGGCTCAGAGC	1	True	NA	NA	False	NA	NA	NA	4182557	4174722	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_4174947_4175027_4175112_4175679_4175761_4175841_4175938_4177078_4177139_4179103_4179287_4182473
H1_mix_00047348	chr19	-	409	4	FSM	ENSG00000178078.12	ENST00000601956.5	409	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	44.1688678696759	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATGTGTCTGGCTTGGCT	NA	False	NA	-3	True	ATTAAA	-16	NA	4326952	4324042	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4324198_4325215_4325309_4325395_4325546_4326941
H1_mix_00047349	chr19	-	1185	12	NIC	ENSG00000178078.12	novel	1376	13	NA	NA	38	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	37.3553408176569	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATGTGTCTGGCTTGGCT	1	True	NA	-3	True	ATTAAA	-16	NA	4338771	4324042	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_4324198_4324454_4324530_4325215_4325309_4325395_4325546_4326941_4327008_4327123_4327227_4327315_4327386_4329960_4330062_4332021_4332079_4333693_4333817_4333972_4334045_4338651
H1_mix_00047352	chr19	-	2401	10	FSM	ENSG00000141985.9	ENST00000598564.5	2194	10	-203	-4	-74	3	multi-exon	FALSE	canonical	3	51	junction_6	244.649459481707	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGCCTCGTCTTGGTGCA	NA	False	NA	-5	True	ATTAAA	-18	NA	4400621	4360366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4361797_4362328_4362386_4362611_4362737_4363369_4363474_4363719_4363879_4364087_4364121_4365572_4365626_4366500_4366574_4366925_4366995_4400323
H1_mix_00047353	chr19	-	1404	9	FSM	ENSG00000141985.9	ENST00000417295.6	1404	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	268.616827469911	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCTGGCCGAGGCGGGG	-21	True	NA	NA	False	NA	NA	NA	4400525	4361315	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4361797_4362328_4362386_4362611_4362737_4363369_4363474_4363719_4363879_4364087_4364222_4366500_4366574_4366925_4366995_4400323
H1_mix_00047354	chr19	-	556	6	FSM	ENSG00000141985.9	ENST00000593591.5	1036	6	480	0	480	0	multi-exon	FALSE	canonical	2	9	junction_5	331.333427230034	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGGCAAGATCCCCGATGA	NA	False	NA	NA	False	AAGAAA	-43	NA	4390130	4363821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4363879_4364087_4364222_4365481_4365626_4366500_4366574_4366925_4366995_4390051
H1_mix_00047355	chr19	-	4599	1	FSM	ENSG00000167671.12	ENST00000588238.1	4598	1	0	-1	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTGGTTCTCCGTTGA	8271	False	NA	NA	False	AATAAA	-18	NA	4449604	4445005	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4445000_4449600
H1_mix_00047356	chr19	-	4047	18	NNC	ENSG00000167680.17	novel	4021	17	NA	NA	0	42140	intron_retention	FALSE	non_canonical	0	0	junction_1	124.797829588083	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCAGGGCATAGTGGTGT	-1	True	NA	NA	False	NA	NA	NA	4581776	4500452	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_4500479_4542592_4544530_4546215_4546275_4546391_4546470_4548026_4548174_4548262_4548446_4550122_4550273_4550798_4550931_4552421_4552640_4554387_4554477_4554975_4555096_4555473_4555565_4555987_4556090_4556950_4557014_4557162_4557224_4558025_4558150_4558336_4558490_4581462
H1_mix_00047357	chr19	-	3832	17	FSM	ENSG00000167680.17	ENST00000586582.6	3862	17	30	0	30	0	multi-exon	FALSE	canonical	1	2	junction_16	125.439477438325	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCCCCCATGACTCTGGC	156	False	NA	-12	True	AATAAA	-17	NA	4559654	4542592	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4544530_4546215_4546275_4546391_4546470_4548026_4548174_4548262_4548446_4550122_4550273_4550798_4550931_4552421_4552640_4554387_4554477_4554975_4555096_4555473_4555565_4555987_4556090_4556950_4557014_4557162_4557224_4558025_4558150_4558336_4558490_4559529
H1_mix_00047358	chr19	-	1015	7	NNC	ENSG00000074842.8	novel	990	6	NA	NA	0	31794	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	332.782085855995	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATACACCTCGGTTGGGC	9	True	NA	NA	False	NA	NA	NA	4670342	4609579	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_4609605_4657544_4658085_4659930_4660004_4660668_4660751_4664875_4664938_4668594_4668646_4670160
H1_mix_00047361	chr19	-	2154	8	FSM	ENSG00000105355.9	ENST00000592528.5	2154	8	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_4	288.876076813401	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTTAATAAACTTCACCCA	27	False	NA	-45	True	NA	NA	NA	4867653	4838368	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4839537_4844667_4844794_4847690_4847891_4852015_4852266_4859589_4859673_4859825_4860025_4861328_4861412_4867608
H1_mix_00047363	chr19	-	3680	3	FSM	ENSG00000223573.7	ENST00000448587.5	3733	3	49	4	-32	-4	multi-exon	FALSE	canonical	0	0	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGATTGAGTTTAAGCTT	8	True	NA	NA	False	AATAAA	-18	NA	5567985	5558170	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5561400_5562081_5562212_5567664
H1_mix_00047364	chr19	-	1470	10	NNC	ENSG00000130254.12	novel	3167	21	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	81.5276973310222	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGCGCGTGCACATGCGTG	4720	False	NA	-13	True	AATAAA	-21	NA	5600172	5586992	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_5587400_5587695_5587768_5587867_5587981_5590277_5590409_5591747_5591794_5592746_5592888_5593890_5594179_5595360_5595498_5598792_5598885_5600129
H1_mix_00047366	chr19	-	513	5	NNC	ENSG00000174917.9	novel	516	4	NA	NA	0	61777	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	217.239930721771	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAACAAATTGAGACAAAA	422	False	NA	NA	False	NA	NA	NA	5680488	5616643	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_5616671_5678423_5678649_5679344_5679397_5679585_5679764_5680457
H1_mix_00047369	chr19	-	581	3	FSM	ENSG00000267157.1	ENST00000586012.1	581	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	121.5	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGAGTGGACCACCCCCG	5598	False	NA	NA	False	NA	NA	NA	5785619	5784004	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5784440_5785382_5785512_5785602
H1_mix_00047373	chr19	-	3237	17	FSM	ENSG00000031823.14	ENST00000340578.10	3233	17	0	-4	0	4	multi-exon	TRUE	canonical	3	7	junction_15	180.11138047053	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTCTGCATGCCCCAGGG	0	True	NA	NA	False	ATTAAA	-18	NA	5978140	5916134	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5917654_5917793_5917981_5918495_5918639_5921200_5921322_5923193_5923304_5923811_5923915_5924826_5924906_5925633_5925738_5927967_5928088_5931403_5931532_5932451_5932545_5933413_5933480_5941620_5941708_5941798_5941836_5951392_5951597_5957917_5957974_5978060
H1_mix_00047374	chr19	-	3207	16	FSM	ENSG00000031823.14	ENST00000034275.12	1762	16	-232	-1213	-176	0	multi-exon	FALSE	canonical	3	301	junction_9	89.1865460705817	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCCTCTGCATGCCCC	NA	False	NA	NA	False	ATTAAA	-14	NA	5978318	5916138	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5917654_5917793_5917981_5918495_5918639_5921200_5921322_5923193_5923304_5923811_5923915_5924826_5924906_5925633_5925738_5927967_5928088_5931403_5931532_5932451_5932545_5933413_5933480_5941620_5941708_5941798_5941836_5957917_5957974_5978060
H1_mix_00047375	chr19	-	2104	13	NIC	ENSG00000031823.14	novel	1783	16	NA	NA	1	503	combination_of_known_junctions	FALSE	canonical	3	36	junction_12	163.624803709245	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCCTGTCTGGGAAAAGG	14	True	NA	NA	False	NA	NA	NA	5978084	5916812	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_5917654_5917793_5917981_5918495_5918639_5921200_5921322_5923193_5923304_5923811_5923915_5924826_5924906_5925633_5925738_5927967_5928088_5931418_5931532_5932451_5932545_5933413_5933480_5978060
H1_mix_00047381	chr19	-	1057	5	FSM	ENSG00000087903.13	ENST00000588021.5	1314	5	17	240	17	83	multi-exon	FALSE	canonical	2	3	junction_4	7.44983221287567	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACCGCCCCAGCCCAGGC	NA	False	NA	NA	False	NA	NA	NA	6026682	6008105	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_6008225_6010135_6010252_6012985_6013106_6016089_6016272_6026162
H1_mix_00047382	chr19	-	3911	1	FSM	ENSG00000125650.5	ENST00000597721.1	3911	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGACTTTGACCATGTG	8426	False	NA	-1	True	AATAAA	-19	NA	6379058	6375147	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_6375100_6379100
H1_mix_00047385	chr19	-	732	4	FSM	ENSG00000125648.15	ENST00000595810.5	734	4	0	2	0	0	multi-exon	FALSE	canonical	3	29	junction_1	123.169260234308	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATTTTGTCAGGTTTTT	5802	False	NA	-4	True	AATACA	-17	NA	6454009	6436080	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_6436465_6444150_6444302_6452311_6452480_6453980
H1_mix_00047386	chr19	-	888	5	FSM	ENSG00000125648.15	ENST00000598908.5	888	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	146.166001518821	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATTTTGTCAGGTTTTT	5141	False	NA	-4	True	AATACA	-17	NA	6454670	6436080	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_6436465_6438446_6438535_6444150_6444302_6454322_6454476_6454558
H1_mix_00047389	chr19	-	1763	9	NIC	ENSG00000205744.10	novel	2446	11	NA	NA	479	51	intron_retention	FALSE	canonical	3	17	junction_8	7.82224392358101	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGGTTTTTTTCCTGGTG	6048	False	NA	NA	False	AATAAA	-19	NA	6475736	6467446	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_6468119_6468233_6468442_6468577_6468646_6468845_6468954_6469595_6469641_6470294_6470367_6471264_6471497_6472888_6472994_6475483
H1_mix_00047390	chr19	-	913	3	FSM	ENSG00000125726.11	ENST00000245903.4	911	3	0	-2	0	2	multi-exon	FALSE	canonical	3	15	junction_2	1	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTCGTGGCGTGCATC	9664	False	6591167	-4	True	ATTAAA	-17	NA	6591150	6585836	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_6586406_6590102_6590137_6590840
H1_mix_00047391	chr19	-	3397	2	NNC	ENSG00000125735.11	novel	4336	4	NA	NA	8487	5083	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGCGTTTCTCTATAAC	8877	False	NA	1	True	AATAAA	-23	NA	6661630	6656169	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_6658945_6661008
H1_mix_00047393	chr19	-	474	4	FSM	ENSG00000125730.17	ENST00000596238.1	563	4	89	0	89	0	multi-exon	FALSE	canonical	3	31	junction_1	4.24264068711928	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAAGGAATCAAGGCCTT	8301	False	NA	NA	False	AATAAA	-41	NA	6686287	6684559	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_6684651_6684774_6684835_6684987_6685147_6686123
H1_mix_00047394	chr19	-	1750	17	NIC	ENSG00000125734.16	novel	2034	18	NA	NA	-13	-1	combination_of_known_junctions	FALSE	canonical	2	2	junction_14	65.423589734514	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGCCGTTGTCTTGCCTTT	67	False	NA	-6	True	NA	NA	NA	6737522	6730056	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_6730385_6730986_6731112_6731198_6731283_6731472_6731523_6731890_6731935_6732024_6732156_6732262_6732381_6732475_6732550_6732986_6733063_6733167_6733302_6733569_6733675_6733844_6733914_6734004_6734055_6734182_6734308_6735907_6735959_6736591_6736712_6737456
H1_mix_00047397	chr19	-	1969	10	NIC	ENSG00000125731.13	novel	2281	10	NA	NA	-42	1	combination_of_known_junctions	FALSE	canonical	3	37	junction_6	24.5678702152543	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGGCTGTGTACTTTCTA	5	True	NA	0	True	AATAAA	-23	NA	6767505	6752158	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_6752754_6753455_6753642_6754051_6754164_6754250_6754426_6754615_6754732_6754830_6754933_6759593_6759671_6760637_6760988_6763679_6763817_6767386
H1_mix_00047398	chr19	-	535	3	FSM	ENSG00000171105.14	ENST00000601099.1	570	3	35	0	35	0	multi-exon	FALSE	canonical	3	36	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTTGTGTGTGGATGGG	1773	False	NA	NA	False	NA	NA	NA	7123123	7120619	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_7120750_7122613_7122774_7122878
H1_mix_00047399	chr19	-	491	4	FSM	ENSG00000171105.14	ENST00000600492.1	653	4	0	162	0	-162	multi-exon	FALSE	canonical	2	3	junction_1	16.9377946878833	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCGTGAGAGCTGCCACCA	NA	False	NA	NA	False	NA	NA	NA	7167978	7159584	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_7159646_7163031_7163200_7166153_7166405_7167967
H1_mix_00047402	chr19	-	3198	1	FSM	ENSG00000214248.2	ENST00000539278.1	4739	1	1480	61	1480	-61	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCAGTGCAGGGCCGTCT	1455	False	NA	NA	False	NA	NA	NA	7902062	7898864	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_7898900_7902100
H1_mix_00047403	chr19	-	616	1	FSM	ENSG00000260500.1	ENST00000564226.1	506	1	66	-176	66	176	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTGAGGTCGGGTGTGC	9821	False	NA	NA	False	NA	NA	NA	7919091	7918475	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_7918500_7919100
H1_mix_00047405	chr19	-	587	2	FSM	ENSG00000104980.8	ENST00000598481.1	587	2	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGAGCAGCCGGGCTGTC	NA	False	NA	NA	False	NA	NA	NA	7931381	7927823	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_7928167_7931137
H1_mix_00047408	chr19	-	1270	6	NNC	ENSG00000167775.11	novel	1253	5	NA	NA	0	26805	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	568.778902562323	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGGCCAGGCATGGCACAG	-1	True	NA	NA	False	NA	NA	NA	8308335	8275321	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_8275362_8302126_8302606_8302776_8302981_8303854_8304089_8305030_8305157_8308148
H1_mix_00047410	chr19	-	570	5	NNC	ENSG00000267855.6	novel	580	4	NA	NA	-26	33446	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	808.063541746563	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGGCCAGGCATGGCACAG	943	False	NA	NA	False	NA	NA	NA	8321401	8275321	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_8275362_8311359_8311596_8316495_8316646_8320856_8320907_8321307
H1_mix_00047411	chr19	-	553	6	FSM	ENSG00000267855.6	ENST00000595856.5	553	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	919.083587058326	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCGAGAATGGACGTTTC	1	True	NA	NA	False	NA	NA	NA	8321375	8308877	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8308885_8311411_8311596_8316495_8316646_8319300_8319395_8320856_8320907_8321307
H1_mix_00047412	chr19	-	641	2	ISM	ENSG00000186994.12	ENST00000595639.1	506	6	9115	-203	635	203	intron_retention	FALSE	canonical	3	39	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGAGCCAAGGGAGGGTG	9115	False	NA	NA	False	NA	NA	NA	8334147	8333013	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_8333231_8333723
H1_mix_00047413	chr19	-	230	1	FSM	ENSG00000279827.1	ENST00000623944.1	1028	1	486	312	486	-312	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCACTCGCCCCGGGCCA	439	False	NA	NA	False	NA	NA	NA	8445111	8444881	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8444900_8445100
H1_mix_00047415	chr19	-	512	5	FSM	ENSG00000133250.14	ENST00000593661.5	512	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	111.339570683562	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCGTGCATGCAGTGCGC	1762	False	NA	NA	False	NA	NA	NA	8512399	8510977	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8511025_8511485_8511537_8511616_8511961_8512074_8512132_8512386
H1_mix_00047416	chr19	-	480	4	FSM	ENSG00000133250.14	ENST00000594748.5	462	4	0	-18	0	0	multi-exon	FALSE	canonical	2	10	junction_1	117.150425616906	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCGTGCATGCAGTGCGC	1747	False	NA	NA	False	NA	NA	NA	8512414	8510977	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8511025_8511475_8511537_8511616_8511961_8512386
H1_mix_00047418	chr19	-	737	7	FSM	ENSG00000142347.19	ENST00000594977.6	931	7	0	194	0	-194	multi-exon	FALSE	canonical	1	2	junction_3	2.54405625374562	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACTTTGGCGGGGGCGTCT	3338	False	NA	NA	False	AAAACA	-19	NA	8552036	8545636	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8545737_8548035_8548123_8548236_8548318_8550159_8550357_8550561_8550695_8551739_8551875_8552032
H1_mix_00047420	chr19	-	4209	25	FSM	ENSG00000142303.14	ENST00000270328.8	4194	25	0	-15	0	13	multi-exon	FALSE	canonical	2	3	junction_14	8.41532580078355	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCAGTGCATCCAGTAGC	2497	False	NA	14	True	AATAAA	-41	NA	8608265	8580226	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8581003_8584894_8585055_8585131_8585309_8585455_8585661_8586121_8586252_8586343_8586471_8586557_8586722_8586815_8586897_8589241_8589366_8589451_8589586_8589888_8589992_8591799_8591864_8591957_8592104_8592762_8592871_8595761_8595904_8596072_8596220_8596306_8596413_8596541_8596586_8596986_8597133_8597233_8597318_8600927_8601146_8603727_8603885_8605011_8605359_8605622_8605810_8608133
H1_mix_00047421	chr19	-	4264	26	FSM	ENSG00000142303.14	ENST00000597188.6	4251	26	0	-13	0	13	multi-exon	FALSE	canonical	2	3	junction_14	8.60846095420082	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCAGTGCATCCAGTAGC	-15	True	NA	14	True	AATAAA	-41	NA	8610715	8580226	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8581003_8584894_8585055_8585131_8585309_8585455_8585661_8586121_8586252_8586343_8586471_8586557_8586722_8586815_8586897_8589241_8589366_8589451_8589586_8589888_8589992_8591799_8591864_8591957_8592104_8592762_8592871_8595761_8595904_8596072_8596220_8596306_8596413_8596541_8596586_8596986_8597133_8597233_8597318_8600927_8601146_8603727_8603885_8605011_8605359_8605622_8605810_8608133_8608249_8610643
H1_mix_00047422	chr19	-	3423	23	FSM	ENSG00000142303.14	ENST00000596851.5	3423	23	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_12	7.56036314664123	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGCCGCCCACCACGCAGC	19	True	NA	NA	False	NA	NA	NA	8610681	8584962	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8585055_8585131_8585661_8586121_8586252_8586343_8586471_8586557_8586722_8586815_8586897_8589241_8589366_8589451_8589586_8589888_8589992_8591799_8591864_8591957_8592104_8592762_8592871_8595761_8595904_8596072_8596220_8596306_8596413_8596541_8596586_8596986_8597133_8597233_8597323_8600927_8601146_8603727_8603885_8605011_8605359_8605622_8605810_8610643
H1_mix_00047423	chr19	-	472	3	FSM	ENSG00000142303.14	ENST00000596236.5	472	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCCTGAGCCCTGTCCC	NA	False	NA	NA	False	NA	NA	NA	8592174	8589800	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8589992_8591799_8591864_8591957
H1_mix_00047424	chr19	-	1079	8	FSM	ENSG00000142303.14	ENST00000601163.1	1079	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	8.72949492425839	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTCCCCCAAACCCCT	NA	False	NA	NA	False	NA	NA	NA	8597322	8591799	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8591864_8591957_8592104_8592762_8592871_8595761_8595904_8596072_8596413_8596541_8596586_8596986_8597133_8597233
H1_mix_00047425	chr19	-	4404	5	FSM	ENSG00000174652.20	ENST00000648978.1	4401	5	0	-3	0	0	multi-exon	FALSE	canonical	2	5	junction_4	26.6739573366983	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCAGTCTGTTATTTTG	NA	False	NA	-6	True	AATAAA	-16	NA	9420745	9412597	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9414721_9415653_9415743_9417827_9417909_9418504_9418632_9418761
H1_mix_00047426	chr19	-	3503	9	FSM	ENSG00000174652.20	ENST00000588221.5	3503	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	21.8771427521969	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCAGTCTGTTATTTTG	-2	True	NA	-6	True	AATAAA	-16	NA	9435526	9412597	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9414721_9415653_9415743_9417827_9417909_9418504_9418632_9418761_9419300_9420064_9420219_9434797_9434860_9435107_9435194_9435283
H1_mix_00047427	chr19	-	268	2	NNC	ENSG00000197961.12	novel	6987	4	NA	NA	7171	85505	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGCATGGTGGTGCAT	4779	False	NA	NA	False	NA	NA	NA	9560572	9474823	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_9474848_9560328
H1_mix_00047428	chr19	-	1713	1	Genic_Genomic	ENSG00000130818.12	novel	NA	NA	NA	NA	11682	48	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTAAAGAATGTGAGAAAAC	NA	False	NA	23	True	NA	NA	NA	9524887	9523174	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr19_-_9523200_9524900
H1_mix_00047429	chr19	-	2162	6	FSM	ENSG00000130818.12	ENST00000535489.5	2375	6	213	0	213	0	multi-exon	FALSE	canonical	3	14	junction_2	6	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	2283	False	NA	NA	False	NA	NA	NA	9536356	9528006	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9529637_9530984_9531068_9532844_9532926_9533839_9533967_9535187_9535280_9536207
H1_mix_00047441	chr19	-	1773	1	FSM	ENSG00000267370.1	ENST00000588113.1	712	1	-87	-974	-87	974	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTATATTTAATCCCCGT	NA	False	NA	NA	False	NA	NA	NA	9756950	9755177	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9755200_9757000
H1_mix_00047442	chr19	-	683	6	FSM	ENSG00000196605.7	ENST00000589412.5	683	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	6.49307323229917	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTTCAACCAGTTTCCAA	7002	False	NA	-76	True	AAGAAA	-45	NA	9785996	9758546	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9758765_9759859_9759943_9762081_9762166_9763281_9763409_9764935_9765036_9785925
H1_mix_00047448	chr19	-	1762	8	ISM	ENSG00000080573.7	ENST00000264828.4	6207	67	42437	0	820	0	3prime_fragment	FALSE	canonical	0	0	junction_5	10.2539191113865	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTCTCTGTGTATTTC	606	False	NA	-2	True	AATAAA	-14	NA	9968067	9959560	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_9960558_9960650_9960891_9962818_9962888_9966313_9966427_9966535_9966747_9967346_9967401_9967903_9967940_9968025
H1_mix_00047449	chr19	-	1034	4	FSM	ENSG00000130811.12	ENST00000590158.1	1034	4	0	0	0	0	multi-exon	FALSE	canonical	3	1890	junction_3	32.7651576458218	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGAGAGCGCGGGCTCCAA	3219	False	NA	-53	True	NA	NA	NA	10116688	10115061	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10115130_10115478_10115586_10115683_10115821_10115966
H1_mix_00047450	chr19	-	3255	18	FSM	ENSG00000130816.17	ENST00000586667.2	3259	18	0	4	0	0	multi-exon	FALSE	canonical	3	564	junction_8	77.7740049614964	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGTGGGTATTCGTGA	NA	False	NA	42	True	AATAAA	-17	NA	10151697	10133345	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10133702_10134216_10134308_10135735_10135853_10136120_10136288_10137084_10137281_10137831_10138010_10138438_10138606_10139675_10139818_10140045_10140329_10140780_10140910_10141104_10141190_10142027_10142221_10143765_10143988_10146350_10146525_10148883_10149018_10149452_10149658_10149852_10149969_10151397
H1_mix_00047451	chr19	-	5215	41	FSM	ENSG00000130816.17	ENST00000592705.5	5215	41	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_38	165.194383606102	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGTGGGTATTCGTGA	3	True	NA	42	True	AATAAA	-17	NA	10194934	10133345	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10133702_10134216_10134308_10135735_10135853_10136120_10136288_10137084_10137281_10137831_10138010_10138438_10138606_10139675_10139818_10140045_10140329_10140780_10140910_10141104_10141190_10142027_10142221_10143765_10143988_10146350_10146525_10148883_10149018_10149452_10149658_10149852_10149969_10151397_10151546_10151749_10151848_10154292_10154480_10154585_10154774_10154904_10155057_10155852_10155946_10156390_10156510_10159657_10159768_10159841_10159923_10160017_10160064_10160383_10160419_10162666_10162749_10163325_10163361_10166597_10166686_10168329_10168365_10173089_10173175_10173870_10173906_10175539_10175619_10177291_10177368_10180186_10180235_10180349_10180530_10180777_10180886_10182040_10182078_10194819
H1_mix_00047452	chr19	-	1791	9	FSM	ENSG00000130816.17	ENST00000588913.5	1775	9	0	-16	0	0	multi-exon	FALSE	canonical	1	2	junction_2	248.584492678043	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACCCTGGGTGGGTATT	2769	False	NA	37	True	AATAAA	-12	NA	10140130	10133350	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10133702_10134216_10134308_10135438_10135853_10136120_10136288_10137084_10137281_10137831_10138010_10138438_10138606_10139675_10139818_10140045
H1_mix_00047454	chr19	-	2879	10	FSM	ENSG00000130816.17	ENST00000678957.1	2873	10	0	-6	0	0	multi-exon	FALSE	canonical	3	600	junction_4	86.1086021139856	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACCCTGGGTGGGTATT	965	False	NA	37	True	AATAAA	-12	NA	10141934	10133350	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10133702_10134216_10134308_10135735_10135853_10136120_10136288_10137084_10137281_10137831_10138010_10138438_10138606_10139675_10140329_10140780_10140910_10141104
H1_mix_00047455	chr19	-	3309	18	FSM	ENSG00000130816.17	ENST00000678647.1	3302	18	0	-7	0	0	multi-exon	FALSE	canonical	3	97	junction_4	156.373521418084	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACCCTGGGTGGGTATT	NA	False	NA	37	True	AATAAA	-12	NA	10151747	10133350	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10133702_10134216_10134308_10135735_10135853_10136120_10136288_10137075_10137281_10137831_10138010_10138438_10138606_10139675_10139818_10140045_10140329_10140780_10140910_10141104_10141190_10142027_10142221_10143765_10143988_10146350_10146525_10148883_10149018_10149452_10149658_10149852_10149969_10151397
H1_mix_00047458	chr19	-	6475	29	FSM	ENSG00000130816.17	ENST00000677783.1	6469	29	0	-6	0	0	multi-exon	FALSE	canonical	3	493	junction_21	82.7091967346425	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACCCTGGGTGGGTATT	8495	False	NA	37	True	AATAAA	-12	NA	10164673	10133350	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10133702_10134216_10134308_10135735_10135853_10136120_10136288_10137084_10137281_10137831_10138010_10138438_10138606_10139675_10139818_10140045_10140329_10140780_10140910_10141104_10142221_10143765_10143988_10146350_10146525_10148883_10149018_10149452_10149658_10149852_10149969_10151397_10151546_10151749_10151848_10154292_10154480_10154585_10154774_10154904_10155057_10155852_10155946_10156390_10156510_10159657_10159768_10159841_10159923_10160017_10160064_10160383_10160419_10162666_10162749_10163325
H1_mix_00047459	chr19	-	6105	35	FSM	ENSG00000130816.17	ENST00000678024.1	6142	35	43	-6	43	0	multi-exon	FALSE	canonical	0	0	junction_29	136.255408451114	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACCCTGGGTGGGTATT	2656	False	NA	37	True	AATAAA	-12	NA	10177906	10133350	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10133702_10134216_10134308_10135735_10135853_10136120_10136288_10137084_10137281_10137831_10138010_10138438_10138606_10139675_10139818_10140045_10140329_10140780_10140910_10141104_10142221_10143765_10143988_10146350_10146525_10148883_10149018_10149452_10149658_10149852_10149969_10151397_10151546_10151749_10151848_10154292_10154480_10154585_10154774_10154904_10155057_10155852_10155946_10156390_10156510_10159657_10159768_10159841_10159923_10160017_10160064_10160383_10160419_10162666_10162749_10163325_10163361_10166591_10166686_10168329_10168365_10173089_10173175_10173870_10173906_10175539_10175619_10177291
H1_mix_00047462	chr19	-	7166	38	FSM	ENSG00000130816.17	ENST00000676610.1	7157	38	0	-9	0	0	multi-exon	FALSE	canonical	3	487	junction_30	75.4137939730026	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACCCTGGGTGGGTATT	-18	True	NA	37	True	AATAAA	-12	NA	10194955	10133350	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10135853_10136120_10136288_10137084_10137281_10137831_10138010_10138438_10138606_10139675_10139818_10140045_10140329_10140780_10140910_10141104_10141190_10142027_10142221_10143765_10143988_10146350_10146525_10148883_10149018_10149452_10149658_10149852_10149969_10151397_10151546_10151749_10151848_10154292_10154480_10154585_10154774_10154904_10155057_10155852_10155946_10156390_10156510_10159657_10159768_10159841_10159923_10160017_10160064_10160383_10160419_10162666_10162749_10163325_10163361_10166597_10166686_10168329_10168365_10173089_10173175_10173870_10173906_10175539_10175619_10177291_10177368_10180349_10180570_10180777_10180886_10182040_10182078_10194819
H1_mix_00047463	chr19	-	5747	39	FSM	ENSG00000130816.17	ENST00000678804.1	5728	39	0	-19	0	0	multi-exon	FALSE	canonical	3	97	junction_3	115.506415382263	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACCCTGGGTGGGTATT	-18	True	NA	37	True	AATAAA	-12	NA	10194955	10133350	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10134308_10135735_10135853_10136120_10136288_10137075_10137281_10137831_10138010_10138438_10138606_10139675_10139818_10140045_10140329_10140780_10140910_10141104_10141190_10142027_10142221_10143765_10143988_10146350_10146525_10148883_10149018_10149452_10149658_10149852_10149969_10151397_10151546_10151749_10151848_10154292_10154480_10154585_10154774_10154904_10155057_10155852_10155946_10156390_10156510_10159657_10159768_10159841_10159923_10160017_10160064_10160383_10160419_10162666_10162749_10163325_10163361_10166597_10166686_10168329_10168365_10173089_10173175_10173870_10173906_10175539_10175619_10177291_10177368_10180349_10180570_10180777_10180886_10182040_10182078_10194819
H1_mix_00047472	chr19	-	3643	2	FSM	ENSG00000267534.4	ENST00000646641.1	3643	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTGGTTGGTGTGTCTT	-15	True	NA	-7	True	AATAAA	-17	NA	10231331	10221432	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10224948_10231203
H1_mix_00047473	chr19	-	1764	1	ISM	ENSG00000267534.4	ENST00000646641.1	3643	2	8135	0	8135	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTGGTTGGTGTGTCTT	8120	False	NA	-7	True	AATAAA	-17	NA	10223196	10221432	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_10221400_10223200
H1_mix_00047475	chr19	-	777	4	FSM	ENSG00000267673.6	ENST00000460631.5	777	4	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_3	134.983949663161	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATTCCACATTGCCATGG	11	True	NA	NA	False	NA	NA	NA	10315996	10310472	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10310643_10310852_10310941_10315385_10315760_10315851
H1_mix_00047476	chr19	-	3516	14	NNC	ENSG00000161847.14	novel	3484	13	NA	NA	0	2541	intron_retention	FALSE	non_canonical	0	0	junction_1	176.309840233929	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATATATATATATAT	-5	True	NA	NA	False	NA	NA	NA	10333529	10313670	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_10313703_10316211_10317601_10317689_10317774_10318228_10318373_10319165_10319241_10320654_10320952_10321047_10321260_10321530_10321619_10322644_10322740_10323144_10323275_10323374_10323567_10328641_10329112_10330459_10330527_10333288
H1_mix_00047477	chr19	-	1650	9	NNC	ENSG00000105401.9	novel	1618	8	NA	NA	0	77462	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	509.550153934821	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATATATATATATAT	-11	True	NA	NA	False	NA	NA	NA	10403542	10313670	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_10313705_10391134_10391707_10393085_10393158_10393258_10393442_10395020_10395144_10395227_10395344_10395434_10395544_10395927_10396204_10403377
H1_mix_00047478	chr19	-	1651	9	NNC	ENSG00000105401.9	novel	1618	8	NA	NA	0	77462	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	509.550153934821	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATATATATATATAT	-11	True	NA	NA	False	NA	NA	NA	10403542	10313670	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_10313706_10391134_10391707_10393085_10393158_10393258_10393442_10395020_10395144_10395227_10395344_10395434_10395544_10395927_10396204_10403377
H1_mix_00047479	chr19	-	1695	9	NNC	ENSG00000105401.9	novel	1618	8	NA	NA	-43	77462	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	509.550153934821	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATATATATATATAT	NA	False	NA	NA	False	NA	NA	NA	10403585	10313670	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_10313705_10391132_10391707_10393085_10393158_10393258_10393442_10395020_10395144_10395227_10395344_10395434_10395544_10395927_10396204_10403377
H1_mix_00047482	chr19	-	2063	3	ISM	ENSG00000076662.10	ENST00000592439.1	905	5	-284	-199	-284	0	intron_retention	FALSE	canonical	3	116	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTTGATTCCACCC	3606	False	NA	-1	True	AATAAA	-18	NA	10336057	10333775	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_10334060_10334159_10334409_10334527
H1_mix_00047483	chr19	-	1652	6	NIC	ENSG00000076662.10	novel	1735	7	NA	NA	-168	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_3	47.9357903867246	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTTGATTCCACCC	NA	False	NA	-1	True	AATAAA	-18	NA	10339829	10333775	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_10334060_10334159_10334409_10334527_10334783_10335670_10335977_10338681_10338949_10339538
H1_mix_00047484	chr19	-	682	2	FSM	ENSG00000105397.14	ENST00000524470.1	350	2	-14	-318	-14	-2	multi-exon	FALSE	canonical	3	83	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGAGCCTGTGATTTTT	2945	False	NA	-13	True	AATAAA	-14	NA	10351299	10350534	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10350969_10351051
H1_mix_00047485	chr19	-	771	4	FSM	ENSG00000105397.14	ENST00000530560.5	558	4	0	-213	0	-2	multi-exon	FALSE	canonical	3	39	junction_1	8.60232526704263	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGAGCCTGTGATTTTT	8278	False	NA	-13	True	AATAAA	-14	NA	10356613	10350534	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10350969_10354041_10354235_10354511_10354610_10356567
H1_mix_00047486	chr19	-	842	3	FSM	ENSG00000105397.14	ENST00000529739.1	842	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	8.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGAGCCAGGCCCGCAGC	166	False	NA	NA	False	NA	NA	NA	10354078	10352433	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10352552_10352925_10353099_10353527
H1_mix_00047488	chr19	-	1377	7	FSM	ENSG00000105401.9	ENST00000591248.5	1377	7	0	0	0	0	multi-exon	FALSE	canonical	3	1480	junction_1	69.9795605079718	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCGCTGCTCGGCCCAGCC	1	True	NA	11	True	AAAACA	-38	NA	10403530	10391452	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10391707_10393085_10393158_10393258_10393442_10395020_10395144_10395227_10395544_10395927_10396204_10403377
H1_mix_00047494	chr19	-	2623	18	FSM	ENSG00000129347.21	ENST00000612875.4	2608	18	0	-15	0	0	multi-exon	FALSE	canonical	3	128	junction_4	28.9091166281755	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAACACGTGTAGCTG	-4	True	NA	NA	False	NA	NA	NA	10566020	10553575	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10554282_10555086_10555186_10555284_10555350_10557551_10557683_10557768_10557896_10557971_10558061_10558163_10558240_10559358_10559530_10559612_10559709_10559809_10559937_10560311_10560449_10561002_10561081_10561168_10561266_10561666_10561717_10561790_10561846_10562728_10562838_10564928_10565035_10565716
H1_mix_00047495	chr19	-	3744	17	FSM	ENSG00000129347.21	ENST00000536689.5	3744	17	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_7	25.296291106603	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCATCCCCTCCCTTTA	19	True	NA	-11	True	AATAAA	-24	NA	10565997	10553084	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10554282_10555086_10555186_10555284_10555350_10557551_10557896_10557971_10558061_10558163_10558240_10559358_10559530_10559612_10559709_10559809_10559937_10560311_10560449_10561002_10561081_10561168_10561266_10561666_10561717_10561790_10561846_10562728_10562838_10564928_10565791_10565905
H1_mix_00047496	chr19	-	635	3	FSM	ENSG00000129347.21	ENST00000543842.1	635	3	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_2	24	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAAGAAGACCTGCATGT	8651	False	NA	NA	False	NA	NA	NA	10558221	10555308	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10555350_10557551_10557896_10557971
H1_mix_00047497	chr19	-	737	6	FSM	ENSG00000129347.21	ENST00000536714.1	806	6	69	0	69	0	multi-exon	FALSE	canonical	3	128	junction_1	30.3275452353137	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAGGTAGGGGCCCCGGG	9266	False	NA	NA	False	NA	NA	NA	10559761	10557557	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10557683_10557768_10557896_10557971_10558061_10558163_10558240_10559358_10559530_10559612
H1_mix_00047500	chr19	-	1045	3	FSM	ENSG00000129355.7	ENST00000335766.2	1086	3	41	0	-39	0	multi-exon	FALSE	canonical	1	2	junction_2	19.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTGTTGGAAGCTTGT	8363	False	NA	NA	False	NA	NA	NA	10569018	10566600	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10567418_10568512_10568669_10568946
H1_mix_00047501	chr19	-	340	3	FSM	ENSG00000129354.12	ENST00000592285.1	336	3	0	-4	0	4	multi-exon	FALSE	canonical	3	927	junction_2	57	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCACCACATTCTGGCTC	10007	False	NA	NA	False	NA	NA	NA	10577272	10574353	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10574493_10574903_10575030_10577197
H1_mix_00047502	chr19	-	850	7	FSM	ENSG00000129354.12	ENST00000589684.5	850	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_6	385.865153475494	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACCGCCTCAGCACCCAG	29	True	NA	NA	False	NA	NA	NA	10587250	10579735	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10579859_10581265_10581393_10581486_10581635_10581747_10581879_10583605_10583674_10583913_10584071_10587154
H1_mix_00047505	chr19	-	809	3	FSM	ENSG00000099203.7	ENST00000591695.5	809	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	139	3779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGACGGCTCAGTGGCTG	-17	True	NA	NA	False	NA	NA	NA	10836318	10832812	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10833214_10835255_10835354_10836008
H1_mix_00047512	chr19	-	1987	3	ISM	ENSG00000161888.12	ENST00000592540.6	2290	5	7667	-10	7646	10	3prime_fragment	FALSE	canonical	3	8	junction_1	4.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAATCAATGTGTTCATC	7685	False	NA	-4	True	AATAAA	-33	NA	11148115	11145482	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_11147290_11147817_11147895_11148012
H1_mix_00047513	chr19	-	349	2	ISM	ENSG00000161888.12	ENST00000585486.1	699	4	-46	1490	-8	-1490	5prime_fragment	FALSE	canonical	3	34	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGCTAGGGGATCAG	9101	False	NA	NA	False	NA	NA	NA	11155815	11149088	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_11149239_11155616
H1_mix_00047514	chr19	-	5242	12	NIC	ENSG00000197256.11	novel	5183	13	NA	NA	-186	3	combination_of_known_junctions	FALSE	canonical	3	134	junction_11	24.0161791195879	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTCTTTTCTTTTTT	7664	False	NA	NA	False	AATAAA	-21	NA	11195871	11164266	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_11166612_11169876_11169967_11170047_11170249_11172980_11173124_11174472_11174693_11175901_11175990_11176577_11176818_11178344_11178448_11178552_11178721_11192830_11194043_11194474_11194591_11195555
H1_mix_00047515	chr19	-	5281	14	NNC	ENSG00000197256.11	novel	5183	13	NA	NA	-54	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	55.3526617224801	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTCTTTTCTTTTTT	5933	False	NA	NA	False	AATAAA	-21	NA	11197602	11164266	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_11164711_11164738_11166612_11169876_11169967_11170047_11170249_11172980_11173124_11174472_11174693_11175901_11175990_11176577_11176818_11178344_11178448_11178552_11178721_11192830_11194043_11194474_11194591_11195555_11195821_11197484
H1_mix_00047517	chr19	-	6431	48	FSM	ENSG00000130158.14	ENST00000294618.12	6430	48	0	-1	0	1	multi-exon	FALSE	canonical	0	0	junction_26	36.0494981879308	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCCATGTGGTGCGGTC	-8	True	NA	-6	True	TTTAAA	-19	NA	11262524	11199293	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11199540_11200307_11200470_11200715_11200823_11200908_11201053_11201888_11202126_11202393_11202484_11202583_11202710_11204080_11204096_11204199_11204332_11208685_11208830_11208910_11209104_11211775_11211877_11211992_11212152_11213175_11213329_11214274_11214410_11214552_11214650_11215386_11215472_11215800_11215928_11216913_11217097_11217230_11217392_11221850_11222021_11222108_11222249_11222734_11222906_11222992_11223107_11227336_11227478_11228939_11229036_11233202_11233367_11235597_11235760_11236345_11236578_11236792_11236880_11237455_11237558_11237640_11237780_11238044_11238116_11238186_11238305_11242044_11242208_11243058_11243153_11243257_11243386_11243556_11243711_11243801_11243883_11245562_11245713_11245811_11245879_11248065_11248152_11250873_11251087_11252118_11252249_11252481_11252551_11252782_11252959_11253638_11253727_11262396
H1_mix_00047519	chr19	-	3101	25	NIC	ENSG00000130158.14	novel	6430	48	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_2	13.5851225815432	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAGATGCAGGGTCTCA	-6	True	NA	NA	False	NA	NA	NA	11262481	11227336	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_11227478_11228939_11229036_11232184_11232290_11233202_11233367_11235597_11235760_11236345_11236578_11236792_11236880_11237455_11237558_11237640_11237780_11238044_11238116_11238186_11238305_11242044_11242208_11243058_11243153_11243257_11243386_11243556_11243711_11243801_11243883_11245562_11245713_11245811_11245879_11248065_11248152_11250873_11251087_11252118_11252249_11252481_11252551_11252782_11252959_11253638_11253727_11262396
H1_mix_00047524	chr19	-	1003	4	FSM	ENSG00000105518.14	ENST00000586956.5	1003	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	346.760243780435	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGCTGTCTTTTTTTTT	-3	True	NA	-4	True	AATAAA	-15	NA	11346285	11342777	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11343121_11345251_11345416_11345519_11345738_11346007
H1_mix_00047525	chr19	-	2303	19	FSM	ENSG00000205517.13	ENST00000562663.5	2303	19	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	54.0348538639531	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGGCGCCTGGTCGGGAA	2580	False	NA	NA	False	NA	NA	NA	11419273	11384340	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11384645_11397243_11397359_11397444_11397598_11399854_11399952_11400039_11400109_11400201_11400298_11402010_11402133_11402214_11402248_11402454_11402542_11402649_11402707_11405146_11405232_11405322_11405427_11406418_11406635_11406721_11406865_11415946_11416149_11416613_11416668_11416835_11417060_11418670_11418785_11419245
H1_mix_00047526	chr19	-	2149	13	FSM	ENSG00000205517.13	ENST00000566153.5	2149	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_12	43.5471487776946	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGTCTTGTTTATTTTG	9944	False	NA	-1	True	NA	NA	NA	11411270	11394055	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11394521_11397243_11397359_11397444_11397598_11399854_11399952_11400039_11400109_11400201_11400298_11402010_11402542_11402649_11402707_11405146_11405232_11405322_11405427_11406418_11406635_11406721_11406865_11411252
H1_mix_00047527	chr19	-	2275	19	FSM	ENSG00000205517.13	ENST00000393423.7	2278	19	3	0	3	0	multi-exon	FALSE	canonical	3	19	junction_4	43.745475956568	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAGAGGCCACTGTGCTG	2528	False	NA	NA	False	NA	NA	NA	11419325	11394324	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11394521_11397243_11397359_11397444_11397598_11399854_11399970_11400039_11400109_11400201_11400298_11402010_11402133_11402214_11402248_11402454_11402542_11402649_11402707_11405146_11405232_11405322_11405427_11406418_11406635_11406721_11406865_11415936_11416149_11416613_11416668_11416835_11417060_11418670_11418785_11419245
H1_mix_00047531	chr19	-	1640	8	NIC	ENSG00000130159.15	novel	1647	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_5	97.612520106965	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCAGTTTCCATTCTTGG	15	True	NA	-13	True	AATAAA	-31	NA	11529122	11505928	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_11506429_11507456_11507563_11507701_11507851_11507990_11508049_11513055_11513285_11513803_11514222_11519074_11519194_11529061
H1_mix_00047532	chr19	-	1286	6	FSM	ENSG00000130159.15	ENST00000592312.5	1286	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	104.91787264332	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGTCCACCCGGGAGCT	13	True	NA	NA	False	NA	NA	NA	11529124	11506300	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11506429_11507456_11507563_11507701_11508049_11513055_11513280_11513803_11514222_11529061
H1_mix_00047533	chr19	-	993	6	ISM	ENSG00000130159.15	ENST00000585318.6	1510	7	0	1545	0	210	5prime_fragment	FALSE	canonical	3	20	junction_5	99.4231361404377	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGGACAACTACGAGTTT	5	True	NA	NA	False	NA	NA	NA	11529132	11507489	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_11507563_11507701_11507851_11507990_11508049_11513055_11513280_11513803_11514222_11529061
H1_mix_00047535	chr19	-	1179	4	FSM	ENSG00000130165.10	ENST00000586120.5	658	4	0	-521	0	0	multi-exon	FALSE	canonical	2	5	junction_3	342.465570045613	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTCCGTGATGTCTT	4548	False	NA	-13	True	AATAAA	-18	NA	11554794	11553042	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11553811_11554010_11554082_11554231_11554366_11554588
H1_mix_00047536	chr19	-	1691	4	FSM	ENSG00000130165.10	ENST00000591674.5	679	4	-524	-488	-524	0	multi-exon	FALSE	canonical	2	32	junction_3	329.800950069381	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTCCGTGATGTCTT	3103	False	NA	-13	True	AATAAA	-18	NA	11556239	11553042	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11553811_11554010_11554082_11554231_11554366_11555521
H1_mix_00047538	chr19	-	1731	7	NIC	ENSG00000102575.13	novel	1630	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_6	10.382945418115	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGCCACTGGTGTGTTA	1757	False	11578994	-6	True	AATAAA	-22	NA	11578979	11574659	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_11575253_11576242_11576589_11576715_11576844_11577056_11577318_11577592_11577680_11578584_11578765_11578843
H1_mix_00047541	chr19	-	2291	4	FSM	ENSG00000197647.13	ENST00000344980.11	2322	4	15	16	1	-16	multi-exon	FALSE	canonical	1	1	junction_3	12.5521135891752	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCAGTTGGTGGTAATGG	4	True	NA	-20	True	AATAAA	-13	NA	12035695	12014731	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12016667_12017875_12017937_12018165_12018302_12035536
H1_mix_00047542	chr19	-	622	1	Intergenic	novelGene_616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATAGGCATTTTTTTTTCA	NA	False	NA	NA	False	NA	NA	NA	12019302	12018680	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_-_12018700_12019300
H1_mix_00047543	chr19	-	3071	1	FSM	ENSG00000242615.1	ENST00000472362.1	1517	1	-951	-603	-951	603	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGCAGATCCAGAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	12144273	12141202	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12141200_12144300
H1_mix_00047544	chr19	-	2751	2	NNC	ENSG00000257591.6	novel	695	4	NA	NA	3529	887	intron_retention	TRUE	canonical	3	52	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGCAGATCCAGAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	12144273	12141202	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_12143687_12144006
H1_mix_00047545	chr19	-	4072	3	FSM	ENSG00000196466.10	ENST00000460935.1	4076	3	0	4	0	-4	multi-exon	FALSE	canonical	3	23	junction_2	4	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACATATTGCTTTTGTTT	6144	False	NA	-5	True	ATTAAA	-18	NA	12395120	12390019	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12392207_12392602_12392664_12393296
H1_mix_00047547	chr19	-	1093	2	FSM	ENSG00000095059.17	ENST00000600510.1	1085	2	0	-8	0	0	multi-exon	FALSE	canonical	3	463	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGATGGTATCTGAAGTC	4977	False	NA	-28	True	NA	NA	NA	12676918	12675742	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12675934_12676016
H1_mix_00047548	chr19	-	1195	8	FSM	ENSG00000095059.17	ENST00000601537.5	1176	8	0	-19	0	0	multi-exon	FALSE	canonical	3	35	junction_2	128.969384122032	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGATGGTATCTGAAGTC	4	True	NA	-28	True	NA	NA	NA	12681860	12675742	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12675934_12676016_12676143_12677290_12677397_12679456_12679544_12679622_12679720_12679800_12679923_12680160_12680326_12681559
H1_mix_00047552	chr19	-	5051	26	FSM	ENSG00000105576.16	ENST00000425528.6	5051	26	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	31.3290663761307	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTAGTCTGTGGCTTCC	26	True	NA	-10	True	AGTAAA	-18	NA	12723932	12699200	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12701244_12701325_12701454_12701597_12701673_12701751_12701852_12702071_12702178_12702822_12702919_12703427_12703527_12703713_12703802_12705239_12705399_12705491_12705600_12705681_12705769_12706195_12706368_12706569_12706796_12710620_12710774_12711295_12711462_12711552_12711614_12714820_12714940_12715046_12715170_12715242_12715325_12715404_12715539_12715632_12715740_12719028_12719179_12719260_12719337_12720878_12720991_12723248_12723366_12723768
H1_mix_00047553	chr19	-	4858	24	FSM	ENSG00000105576.16	ENST00000450764.6	4993	24	135	0	135	0	multi-exon	FALSE	canonical	3	42	junction_8	24.8358695414317	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGTTT	9810	False	NA	NA	False	NA	NA	NA	12721580	12699672	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12701244_12701325_12701454_12701597_12701673_12701751_12701852_12702071_12702148_12702822_12702919_12703427_12703527_12703713_12703802_12705239_12705399_12705491_12705600_12705681_12705769_12706195_12706368_12706569_12706796_12710620_12710774_12711295_12711462_12711552_12711614_12714820_12714940_12715046_12715170_12715242_12715325_12715404_12715539_12715632_12715740_12719028_12719179_12719260_12719337_12720878
H1_mix_00047555	chr19	-	545	5	FSM	ENSG00000105576.16	ENST00000588484.1	545	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	28.0122740954746	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACAACTGACCCTGTTCCT	4671	False	NA	NA	False	NA	NA	NA	12719287	12715197	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12715325_12715404_12715539_12715632_12715740_12719028_12719179_12719260
H1_mix_00047556	chr19	-	930	2	FSM	ENSG00000123144.11	ENST00000589590.1	930	2	0	0	0	0	multi-exon	FALSE	canonical	3	2403	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCCGGAGCTGTGTGCTT	5022	False	NA	-16	True	AGTAAA	-12	NA	12731853	12730648	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12731069_12731343
H1_mix_00047557	chr19	-	2084	2	FSM	ENSG00000095066.12	ENST00000592259.1	2095	2	0	11	0	-11	multi-exon	FALSE	canonical	3	460	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGTCCATCTCAAAAAAAAA	9020	False	NA	NA	False	NA	NA	NA	12766523	12764358	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12764918_12764998
H1_mix_00047567	chr19	-	2041	17	NIC	ENSG00000104907.13	novel	2128	17	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	30	junction_16	102.605109978743	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGCCTGTGGTTTGTGTA	-2	True	NA	-7	True	AATAAA	-24	NA	13116740	13104902	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_13105082_13105266_13105397_13105486_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13109914_13110002_13110157_13110307_13112704_13112818_13112895_13113012_13115278_13115467_13115625_13115769_13115996_13116053_13116145_13116341_13116652
H1_mix_00047573	chr19	-	1245	7	FSM	ENSG00000104915.15	ENST00000589083.5	1241	7	0	-4	0	0	multi-exon	FALSE	canonical	0	0	junction_5	162.644465698106	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTCGTGTGGTGTGTG	18	True	NA	-1	True	AATAAA	-23	NA	13150226	13144057	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13144672_13144763_13144871_13145287_13145396_13149028_13149092_13149498_13149594_13149727_13149898_13150138
H1_mix_00047574	chr19	-	1128	7	FSM	ENSG00000104915.15	ENST00000343587.9	1128	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	191.633910244392	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTCGTGTGGTGTGTG	4658	False	NA	-1	True	AATAAA	-23	NA	13150346	13144057	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13144487_13144576_13144672_13144763_13144871_13145287_13145386_13149572_13149594_13149727_13149898_13150138
H1_mix_00047575	chr19	-	1482	6	ISM	ENSG00000104915.15	ENST00000589083.5	1241	7	0	0	0	0	intron_retention	FALSE	canonical	0	0	junction_5	174.30387259037	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTATTTGTGTCGTGTGGTG	18	True	NA	-5	True	AATAAA	-19	NA	13150226	13144061	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_13144672_13144763_13144871_13145287_13145396_13149028_13149092_13149498_13149594_13149727
H1_mix_00047576	chr19	-	4569	24	NIC	ENSG00000141837.22	novel	8340	46	NA	NA	1172	2	combination_of_known_junctions	FALSE	canonical	1	2	junction_4	3.73001923296126	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGGATAGGAGTGGTC	3544	False	NA	-2	True	AATAAA	-19	NA	13283396	13206439	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_13208054_13208755_13209010_13209311_13209499_13212102_13212217_13212383_13212523_13212630_13212741_13214232_13214334_13214500_13214609_13224666_13224773_13230081_13230210_13231709_13231861_13234920_13235037_13235208_13235275_13235613_13235731_13245181_13245266_13252990_13253102_13255094_13255260_13257349_13257552_13259563_13259702_13261449_13261611_13262733_13262834_13275849_13275957_13277068_13277129_13283266
H1_mix_00047577	chr19	-	1034	10	FSM	ENSG00000141837.22	ENST00000636768.1	1034	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	3.15445990368409	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCATGACCACCCAATC	NA	False	NA	NA	False	NA	NA	NA	13231736	13208995	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13209010_13209311_13209499_13212102_13212217_13212383_13212523_13212630_13212741_13214232_13214334_13214500_13214609_13224666_13224773_13230081_13230210_13231709
H1_mix_00047578	chr19	-	896	9	FSM	ENSG00000141837.22	ENST00000573891.6	896	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	3.78937659780603	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCTGGATGAGTACGTGC	2437	False	NA	NA	False	NA	NA	NA	13255098	13230132	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13230210_13231709_13231861_13234920_13235037_13235208_13235275_13235613_13235731_13236448_13236619_13245181_13245266_13252990_13253102_13255094
H1_mix_00047580	chr19	-	210	1	FSM	ENSG00000141837.22	ENST00000637625.1	1890	1	-194	1874	-194	-1874	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTATCACCCAGCCCCA	NA	False	NA	NA	False	NA	NA	NA	13317321	13317111	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13317100_13317300
H1_mix_00047581	chr19	-	18020	1	FSM	ENSG00000267519.6	ENST00000587762.2	19049	1	774	255	774	-255	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGACTCCTCTCTCTCC	9098	False	NA	NA	False	NA	NA	NA	13842154	13824134	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13824100_13842200
H1_mix_00047583	chr19	-	4399	21	FSM	ENSG00000132005.9	ENST00000254325.9	4375	21	0	-24	0	24	multi-exon	TRUE	canonical	0	0	junction_4	4.25294015946615	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGCCTTGGGGCGGGGGCT	-19	True	NA	18	True	NA	NA	NA	14006320	13961505	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13962865_13962993_13963040_13963121_13963276_13963537_13963747_13963857_13964008_13965448_13965547_13965625_13965778_13966420_13966531_13966632_13966752_13968564_13968681_13968774_13968895_13969993_13970176_13972742_13973128_13977991_13978087_13979446_13979543_13980572_13980690_13982120_13982229_13983186_13983271_13983485_13983596_13993524_13993896_14006102
H1_mix_00047585	chr19	-	215	1	FSM	ENSG00000072062.15	ENST00000587533.1	2095	1	305	1575	305	-698	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACCATTTTGGGGCATGA	8791	False	NA	NA	False	NA	NA	NA	14098160	14097945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14097900_14098200
H1_mix_00047586	chr19	-	2579	3	FSM	ENSG00000105011.9	ENST00000474890.1	765	3	-39	-1775	0	0	multi-exon	FALSE	canonical	3	286	junction_1	18.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTTTGTGCTTTTGTC	NA	False	NA	-4	True	ATTAAA	-39	NA	14136613	14119511	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14121709_14126121_14126238_14136347
H1_mix_00047588	chr19	-	1478	10	FSM	ENSG00000123136.15	ENST00000588692.5	1478	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	328.055136889374	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGTATGAGAATAAACTTG	6160	False	NA	-52	True	NA	NA	NA	14413220	14408849	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14408953_14409036_14409185_14409302_14409448_14409535_14409646_14409741_14409982_14410215_14410335_14410988_14411173_14411505_14411599_14412550_14412679_14413012
H1_mix_00047593	chr19	-	1863	8	FSM	ENSG00000123159.16	ENST00000586027.5	1386	8	5	-482	0	0	multi-exon	FALSE	canonical	3	376	junction_7	164.972601312077	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGACCTGTGTGGCTTCGG	-12	True	NA	-5	True	CATAAA	-15	NA	14496127	14477763	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14478568_14478683_14478766_14479411_14479525_14480304_14480486_14480592_14480779_14482688_14483007_14491655_14491744_14496036
H1_mix_00047594	chr19	-	1068	7	FSM	ENSG00000123159.16	ENST00000591349.5	1068	7	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_5	305.601410700642	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTCCCTGGTTCCCAGTC	-17	True	NA	NA	False	NA	NA	NA	14496132	14478245	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14478568_14478683_14478766_14479411_14479525_14480304_14480486_14480592_14480779_14491655_14491744_14496036
H1_mix_00047596	chr19	-	1131	1	FSM	ENSG00000123159.16	ENST00000587811.1	1717	1	-25	611	-25	498	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTAGATTGTGCAAGACT	NA	False	NA	NA	False	NA	NA	NA	14483488	14482357	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14482400_14483500
H1_mix_00047598	chr19	-	566	4	NNC	ENSG00000099795.7	novel	535	3	NA	NA	0	38912	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1157.51141103087	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGATATTTTTCTGGTG	-12	True	NA	NA	False	AATGAA	-44	NA	14572066	14527165	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_14527197_14566077_14566266_14566764_14566934_14571888
H1_mix_00047599	chr19	-	1106	1	FSM	ENSG00000269378.1	ENST00000596032.1	609	1	-396	-101	-396	101	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCAGGAGTTTTAGACCA	NA	False	NA	NA	False	NA	NA	NA	14622638	14621532	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14621500_14622600
H1_mix_00047601	chr19	-	1737	9	FSM	ENSG00000105143.13	ENST00000221742.7	1719	9	-18	0	-18	0	multi-exon	FALSE	canonical	3	11	junction_2	28.9889526371685	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCCCCAGAGAGGAGGGAA	6922	False	NA	NA	False	NA	NA	NA	14972936	14950178	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14950391_14952927_14953063_14954134_14954330_14956475_14956710_14962001_14962346_14964318_14964362_14968302_14968508_14971736_14971875_14972705
H1_mix_00047602	chr19	-	2187	6	ISM	ENSG00000105143.13	ENST00000594383.2	2420	10	3	11277	3	0	5prime_fragment	FALSE	canonical	3	16	junction_5	22.8962879087419	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTGAAATATCTCTACA	-3	True	NA	-16	True	AATAAA	-30	NA	14979861	14961309	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_14962346_14964318_14964362_14968302_14968508_14971736_14971875_14972705_14972918_14979308
H1_mix_00047603	chr19	-	2464	16	NIC	ENSG00000105135.16	novel	2305	16	NA	NA	1	8	combination_of_known_junctions	FALSE	canonical	3	64	junction_15	102.691901660582	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGTGCATATTTATTTA	118	False	NA	-2	True	AATAAA	-40	NA	15125658	15114975	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_15115431_15115565_15115672_15115849_15115922_15116000_15116072_15116151_15116322_15116407_15116523_15117880_15118016_15119165_15119303_15119417_15119516_15119981_15120082_15122692_15122805_15122891_15123031_15123115_15123244_15123374_15123577_15124924_15125070_15125379
H1_mix_00047607	chr19	-	788	5	FSM	ENSG00000105135.16	ENST00000533747.1	788	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_4	170.421536197747	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTTTCCGGCCACTCTG	36	True	NA	NA	False	NA	NA	NA	15125659	15122997	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15123031_15123115_15123244_15123374_15123577_15124924_15125070_15125379
H1_mix_00047608	chr19	-	481	3	FSM	ENSG00000074181.9	ENST00000597756.1	559	3	0	78	0	-78	multi-exon	FALSE	canonical	3	388	junction_1	22.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAGCCTGGGCAACAGAG	NA	False	NA	NA	False	NA	NA	NA	15165967	15162410	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15162563_15165367_15165516_15165786
H1_mix_00047611	chr19	-	1693	8	NNC	ENSG00000105131.8	novel	1771	8	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_7	58.7207156715549	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAGCTGTATTTCATTTT	-29	True	NA	-4	True	AATACA	-23	NA	15232448	15226920	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_15227663_15227770_15227908_15227996_15228101_15230961_15231091_15231238_15231397_15231775_15231862_15231968_15232257_15232399
H1_mix_00047612	chr19	-	1672	8	NNC	ENSG00000105131.8	novel	1805	9	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_7	62.7918492045792	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAGCTGTATTTCATTTT	9	True	NA	-4	True	AATACA	-23	NA	15233434	15226920	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_15227663_15227770_15227908_15227996_15228101_15230961_15231091_15231238_15231397_15231775_15231862_15231968_15232257_15233406
H1_mix_00047613	chr19	-	2472	8	NIC	ENSG00000105131.8	novel	1805	9	NA	NA	0	1	intron_retention	FALSE	canonical	3	19	junction_7	60.7541045896472	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAGCTGTATTTCATTTT	8	True	NA	-4	True	AATACA	-23	NA	15233435	15226920	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_15227663_15227770_15227908_15227996_15228101_15230961_15231091_15231238_15231397_15231775_15231862_15231968_15233001_15233351
H1_mix_00047614	chr19	-	6957	20	NIC	ENSG00000141867.19	novel	7169	20	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	1	3	junction_5	312.862505533055	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCCTGTGATGGCTGCTT	7409	False	15273002	47	True	AATAAA	-24	NA	15272981	15235518	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_15238446_15238742_15238981_15239058_15239265_15239391_15239523_15239658_15239822_15239909_15240023_15242899_15243488_15244230_15244601_15244709_15244763_15254151_15254263_15255296_15255593_15256063_15256264_15256963_15257174_15263419_15263549_15264403_15264767_15265353_15265644_15267415_15267552_15268153_15268282_15268904_15269043_15272814
H1_mix_00047617	chr19	-	3344	13	FSM	ENSG00000105127.10	ENST00000680461.1	3381	13	0	37	0	-37	multi-exon	FALSE	canonical	1	1	junction_10	64.3588032483168	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTCTCTTAAGGCAAAAA	31	False	NA	85	True	NA	NA	NA	15379798	15353436	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15355371_15358966_15359063_15360847_15360979_15361728_15361823_15362109_15362252_15368234_15368323_15370145_15370180_15371951_15371999_15372217_15372348_15372850_15373341_15374602_15374636_15376975_15377015_15379712
H1_mix_00047620	chr19	-	3654	13	FSM	ENSG00000011243.19	ENST00000680774.1	3654	13	0	0	0	0	multi-exon	FALSE	canonical	1	138	junction_5	224.207245397844	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGGAAACCAAACCTAATA	NA	False	NA	-40	True	NA	NA	NA	15419044	15380085	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15398629_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
H1_mix_00047621	chr19	-	4854	11	FSM	ENSG00000011243.19	ENST00000680323.1	4863	11	9	0	-5	0	multi-exon	FALSE	canonical	1	284	junction_8	167.73443295877	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGGAAACCAAACCTAATA	NA	False	NA	-40	True	NA	NA	NA	15419035	15380085	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
H1_mix_00047622	chr19	-	3047	14	FSM	ENSG00000011243.19	ENST00000680302.1	3056	14	9	0	-5	0	multi-exon	FALSE	canonical	1	18	junction_6	278.48036485445	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGGAAACCAAACCTAATA	NA	False	NA	-40	True	NA	NA	NA	15419035	15380085	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15398629_15398704_15399301_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
H1_mix_00047624	chr19	-	3023	14	FSM	ENSG00000011243.19	ENST00000679634.1	3009	14	22	-36	0	0	multi-exon	FALSE	canonical	1	105	junction_5	222.215578467419	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGGGTTTCTCTGTTAC	-16	True	NA	-4	True	AATAAA	-15	NA	15419022	15380049	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15398767_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
H1_mix_00047625	chr19	-	792	1	FSM	ENSG00000279203.1	ENST00000624655.1	631	1	-118	-43	-118	43	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTGTAGTTGAGTCACAA	NA	False	NA	NA	False	NA	NA	NA	15383950	15383158	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15383200_15384000
H1_mix_00047627	chr19	-	6293	11	FSM	ENSG00000011451.21	ENST00000643092.1	6299	11	6	0	-4	0	multi-exon	FALSE	canonical	3	9	junction_8	45.8257569495584	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGCAGGCGGCCAGCGTG	-5	True	NA	-12	True	ATTAAA	-21	NA	15449945	15422090	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15423236_15424182_15424379_15424612_15425033_15425240_15425769_15426981_15427534_15429585_15430090_15436805_15437130_15438577_15440716_15442675_15442749_15448102_15448368_15449797
H1_mix_00047629	chr19	-	869	1	FSM	ENSG00000267218.2	ENST00000593183.2	939	1	33	37	33	-37	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTCAGCTGACACCCG	9461	False	NA	NA	False	NA	NA	NA	15903205	15902336	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15902300_15903200
H1_mix_00047630	chr19	-	3608	1	FSM	ENSG00000279198.1	ENST00000624324.1	3103	1	-510	5	-510	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTACCCAGTCTATGGTG	8540	False	NA	NA	False	AATAAA	-13	NA	16077905	16074297	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16074300_16077900
H1_mix_00047631	chr19	-	2879	23	Fusion	ENSG00000277825.1_ENSG00000127527.14	novel	3082	23	NA	NA	0	-303	multi-exon	FALSE	non_canonical	0	0	junction_1	56.5409417959549	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGGAGCAGTGGCTCAT	67	False	NA	NA	False	NA	NA	NA	16471943	16352764	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_-_16352791_16355243_16355852_16385128_16385212_16386170_16386232_16392303_16392441_16393950_16394002_16395343_16395468_16402320_16402486_16403732_16403931_16404587_16404750_16413772_16413846_16417551_16417638_16417947_16418105_16421318_16421477_16425082_16425317_16428701_16428762_16434364_16434491_16436936_16437000_16437769_16437866_16440861_16440910_16441891_16441982_16442177_16442220_16471912
H1_mix_00047632	chr19	-	2828	24	Fusion	ENSG00000277825.1_ENSG00000127527.14	novel	2924	23	NA	NA	0	-303	multi-exon	FALSE	non_canonical	0	0	junction_1	65.4344792712888	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGGAGCAGTGGCTCAT	5	True	NA	NA	False	NA	NA	NA	16471961	16352764	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_-_16352790_16361577_16361985_16377121_16377255_16385128_16385212_16386170_16386232_16392303_16392441_16393950_16394002_16395343_16395468_16402320_16402486_16403732_16403931_16404587_16404750_16413772_16413846_16417551_16417638_16417947_16418105_16421318_16421477_16425082_16425317_16428701_16428762_16434364_16434491_16436936_16437000_16437769_16437866_16440861_16440910_16441891_16441982_16442177_16442220_16471912
H1_mix_00047634	chr19	-	3082	23	FSM	ENSG00000127527.14	ENST00000602022.5	3082	23	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	53.1703950435852	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTTTAATCTCTGTAAA	5	True	NA	-8	True	TATAAA	-25	NA	16471961	16355238	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16355852_16361778_16361985_16385128_16385212_16386170_16386232_16392303_16392441_16393950_16394002_16395343_16395468_16402320_16402486_16403732_16403931_16404587_16404750_16413772_16413846_16417551_16417638_16417947_16418105_16421318_16421477_16425082_16425317_16428701_16428762_16434364_16434491_16436936_16437000_16437769_16437866_16440861_16440910_16441891_16441982_16442177_16442220_16471912
H1_mix_00047635	chr19	-	2987	23	NIC	ENSG00000127527.14	novel	3216	24	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	57.6079116754227	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAGAAGCTTCTTTAATC	19	True	NA	-16	True	TATAAA	-42	NA	16471947	16355246	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_16355852_16377121_16377255_16385128_16385212_16386170_16386232_16392303_16392441_16393950_16394002_16395343_16395468_16402320_16402486_16403732_16403931_16404587_16404750_16413772_16413846_16417551_16417638_16417947_16418105_16421318_16421477_16425082_16425317_16428701_16428762_16434364_16434491_16436936_16437000_16437769_16437866_16440861_16440910_16441891_16441982_16442177_16442220_16471912
H1_mix_00047636	chr19	-	2477	1	FSM	ENSG00000280332.1	ENST00000623994.1	1999	1	-115	-363	-115	363	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCTGGGCGGTGGGCAG	9053	False	NA	NA	False	NA	NA	NA	16358442	16355965	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16356000_16358400
H1_mix_00047638	chr19	-	4064	18	NNC	ENSG00000085872.15	novel	4075	17	NA	NA	0	24351	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	132.359607675244	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAGCTTCAAGAGAGCTA	130	False	NA	NA	False	NA	NA	NA	16542400	16493542	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_16493568_16517892_16519353_16519620_16519716_16520148_16520266_16520363_16520508_16520825_16520913_16521520_16521655_16523051_16523291_16525241_16525678_16528079_16528256_16529647_16529901_16530584_16530675_16530768_16530881_16532597_16532750_16533010_16533149_16535451_16535637_16541869_16542044_16542353
H1_mix_00047639	chr19	-	4080	18	NNC	ENSG00000085872.15	novel	4075	17	NA	NA	0	24351	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	132.359607675244	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAGCTTCAAGAGAGCTA	24	True	NA	NA	False	NA	NA	NA	16542415	16493542	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_16493568_16517891_16519353_16519620_16519716_16520148_16520266_16520363_16520508_16520825_16520913_16521520_16521655_16523051_16523291_16525241_16525678_16528079_16528256_16529647_16529901_16530584_16530675_16530768_16530881_16532597_16532750_16533010_16533149_16535451_16535637_16541869_16542044_16542353
H1_mix_00047649	chr19	-	1697	3	FSM	ENSG00000160111.15	ENST00000594249.6	1593	3	51	-155	1	0	multi-exon	FALSE	canonical	2	6	junction_2	9.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTTCTGGGGTGCACAT	20	False	NA	-3	True	AATACA	-18	NA	16896922	16892953	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_16894438_16896175_16896327_16896860
H1_mix_00047651	chr19	-	1389	12	NNC	ENSG00000131351.15	novel	1407	11	NA	NA	0	9374	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	62.6250814486199	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTGTGGTGGTGCTCAC	-1	True	NA	NA	False	AAAAAG	-1	NA	17075444	17040354	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_17040383_17049766_17050177_17052824_17052967_17055860_17056003_17058548_17058708_17058810_17058877_17059556_17059652_17059996_17060093_17062697_17062780_17069030_17069087_17073273_17073336_17075393
H1_mix_00047652	chr19	-	1230	10	NIC	ENSG00000131351.15	novel	1545	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	84.2664791371566	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCCATTTTCTATGAAGG	-9	True	NA	-30	True	AGTAAA	-18	NA	17075452	17049760	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_17050177_17055860_17056003_17058548_17058708_17058810_17058877_17059556_17059652_17059996_17060090_17062697_17062780_17069030_17069087_17073273_17073336_17075393
H1_mix_00047657	chr19	-	487	3	FSM	ENSG00000130307.12	ENST00000596436.5	487	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	4	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCAGTGGCACAATCTCGG	18	True	NA	NA	False	NA	NA	NA	17264737	17263832	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_17264151_17264245_17264348_17264670
H1_mix_00047658	chr19	-	2340	1	FSM	ENSG00000269815.1	ENST00000594077.1	500	1	-496	-1344	-496	1344	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCAGTGTCTCTTTCTGCA	9451	False	NA	NA	False	NA	NA	NA	17297191	17294851	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_17294900_17297200
H1_mix_00047660	chr19	-	459	4	FSM	ENSG00000130303.14	ENST00000533098.5	459	4	0	0	0	0	multi-exon	FALSE	canonical	3	684	junction_2	15.9234278833282	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTTAGCGGGGAGAGCACG	2853	False	NA	NA	False	NA	NA	NA	17404537	17403240	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_17403327_17403679_17403825_17404128_17404190_17404370
H1_mix_00047661	chr19	-	5687	9	NNC	ENSG00000130477.16	novel	9985	44	NA	NA	-4127	8	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_8	18.9732542016387	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGTGGTTGCCTCCTCCTT	NA	False	NA	-22	True	ATTAAA	-28	NA	17623169	17601327	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_17606355_17609939_17610100_17611762_17611856_17617701_17617850_17618420_17618502_17618905_17618963_17620692_17620723_17621831_17621871_17623117
H1_mix_00047663	chr19	-	2628	5	ISM	ENSG00000105639.20	ENST00000527670.5	3996	23	12677	-1370	10755	0	3prime_fragment	FALSE	canonical	1	2	junction_4	13.0647426304539	456	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTGTGCTGGACTTGGG	10002	False	NA	-3	True	AATAAA	-17	NA	17831770	17824781	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_17826911_17830107_17830219_17830502_17830621_17831227_17831401_17831673
H1_mix_00047664	chr19	-	511	1	FSM	ENSG00000279617.1	ENST00000623214.1	433	1	-47	-31	-47	31	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTCACTTCATTCATTC	NA	False	NA	NA	False	NA	NA	NA	17871752	17871241	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_17871200_17871800
H1_mix_00047665	chr19	-	226	1	FSM	ENSG00000241464.3	ENST00000467018.3	153	1	-105	32	-105	-32	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACACTGGAGAAGAACCAAG	9041	False	NA	NA	False	AATAAA	-21	NA	18285600	18285374	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18285400_18285600
H1_mix_00047666	chr19	-	1118	6	FSM	ENSG00000130520.11	ENST00000600289.6	1113	6	0	-5	0	-4	multi-exon	FALSE	canonical	2	31	junction_2	1898.49213851414	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATCCACTGTTCCTTTTG	57	False	NA	-20	True	AATAAA	-22	NA	18323060	18306910	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18307556_18309677_18309862_18310109_18310215_18312603_18312703_18316023_18316066_18323017
H1_mix_00047667	chr19	-	702	3	FSM	ENSG00000105655.19	ENST00000582287.6	696	3	0	-6	0	0	multi-exon	FALSE	canonical	3	842	junction_2	23	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGGTTCTTGGGGCCTG	8217	False	NA	-29	True	AATAAA	-27	NA	18435737	18434808	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18435118_18435265_18435484_18435562
H1_mix_00047668	chr19	-	1666	10	FSM	ENSG00000105655.19	ENST00000582770.6	1654	10	0	-12	0	0	multi-exon	FALSE	canonical	3	11	junction_6	258.421753088117	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGGTTCTTGGGGCCTG	-3	True	NA	-29	True	AATAAA	-27	NA	18438162	18434808	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18436480_18436972_18437106_18437598_18437761_18437859_18437989_18438092
H1_mix_00047669	chr19	-	1765	12	FSM	ENSG00000105656.13	ENST00000596124.3	1852	12	87	0	87	0	multi-exon	FALSE	canonical	2	2	junction_11	25.9274257294988	2415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCTCCCCGATGGCGGGG	116	False	NA	NA	False	NA	NA	NA	18475846	18444750	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18444869_18445223_18445269_18446308_18446481_18446747_18446815_18450476_18450976_18451551_18451649_18458204_18458330_18461577_18461853_18465411_18465576_18465796_18465919_18472834_18472883_18475813
H1_mix_00047672	chr19	-	1261	7	NIC	ENSG00000223802.9	novel	2094	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	104	junction_1	48.061303445588	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTTGGCTCGAGCTGGT	2	True	NA	-6	True	AATAAA	-20	NA	18896135	18877910	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_18878099_18878929_18879040_18879240_18879389_18880273_18880436_18884086_18884268_18893415_18893576_18895823
H1_mix_00047676	chr19	-	1144	11	FSM	ENSG00000105669.14	ENST00000600932.5	1144	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	1124.541635512	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACCCCCATCTGTTAATAA	-6	True	NA	-51	True	NA	NA	NA	18919380	18899562	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18899727_18899872_18899948_18900380_18900450_18903267_18903424_18904770_18904853_18905575_18905630_18905866_18905936_18906959_18907113_18910970_18911072_18912983_18913047_18919222
H1_mix_00047680	chr19	-	1607	10	FSM	ENSG00000051128.19	ENST00000542541.6	1607	10	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_9	143.321274255851	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGGCTGGTTTTCTATG	0	True	NA	NA	False	NA	NA	NA	18940304	18929442	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18929635_18931324_18931412_18931508_18931626_18931975_18932133_18932923_18933046_18934302_18934411_18938352_18938485_18938727_18938885_18938968_18939050_18939850
H1_mix_00047681	chr19	-	866	8	FSM	ENSG00000051128.19	ENST00000596482.5	866	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	152.983525857111	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCGGTGAGAAGGAGGGG	-37	True	NA	NA	False	NA	NA	NA	18941261	18931585	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18931626_18931975_18932133_18932923_18933046_18934302_18934411_18938352_18938485_18938727_18938885_18938968_18939050_18941192
H1_mix_00047682	chr19	-	555	2	FSM	ENSG00000051128.19	ENST00000599808.1	555	2	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGGGCTTTGCCTCTGA	2197	False	NA	NA	False	NA	NA	NA	18939027	18938388	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18938885_18938968
H1_mix_00047684	chr19	-	4171	12	FSM	ENSG00000064607.17	ENST00000594773.5	4169	12	0	-2	0	0	multi-exon	FALSE	canonical	3	25	junction_11	181.863994228363	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTCTCCATGGCTGTG	15	True	NA	-8	True	AATAAA	-21	NA	19033816	18990887	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18991150_18993647_18993741_18994365_18995281_19001612_19001675_19004167_19004274_19004429_19004647_19008316_19008429_19009854_19010343_19019108_19019230_19024618_19026227_19030950_19031083_19033761
H1_mix_00047686	chr19	-	3489	11	NIC	ENSG00000064607.17	novel	6189	11	NA	NA	-13	-118	intron_retention	FALSE	canonical	3	25	junction_10	143.456230258571	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTTCTCTCAAAGAAAAAA	2	True	NA	-42	True	AAAACA	-42	NA	19033829	18993579	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_18993741_18994365_18994487_18995143_18995281_19001612_19001675_19004167_19004647_19008316_19008429_19009854_19010343_19019108_19019230_19024618_19026227_19030950_19031083_19033761
H1_mix_00047688	chr19	-	1771	12	NIC	ENSG00000064545.15	novel	2251	12	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	9	junction_11	107.827379647532	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTCTGAGTGGTTTGGG	-5	True	NA	-5	True	AATAAA	-23	NA	19138477	19119616	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_19120184_19120764_19120862_19120991_19121167_19121307_19121422_19121524_19121669_19121758_19121820_19130155_19130308_19132351_19132509_19132656_19132755_19133129_19133211_19134783_19134888_19138456
H1_mix_00047689	chr19	-	582	5	FSM	ENSG00000064545.15	ENST00000587925.5	582	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	155.699028577573	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGACGCCCCGATGACC	6071	False	NA	NA	False	NA	NA	NA	19132401	19120991	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19121167_19121524_19121669_19121758_19121820_19130155_19130308_19132351
H1_mix_00047692	chr19	-	1813	13	FSM	ENSG00000064489.23	ENST00000602804.5	1804	13	0	-9	0	6	multi-exon	FALSE	canonical	3	18	junction_8	71.2179752590594	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGACTCGCCTCATTCTT	-15	True	NA	-1	True	AATAAA	-30	NA	19192158	19145562	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19146023_19146272_19146385_19146554_19146649_19146741_19146876_19147035_19147184_19147697_19147833_19149225_19149430_19150681_19150765_19180685_19180762_19182572_19182684_19186033_19186099_19186892_19187006_19192080
H1_mix_00047693	chr19	-	801	4	FSM	ENSG00000254901.8	ENST00000585679.1	801	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	54.3507129668048	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTTGAGTCCGTTTCTG	4	True	NA	-4	True	NA	NA	NA	19192139	19176905	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19177461_19180685_19180762_19182572_19182684_19192080
H1_mix_00047697	chr19	-	970	4	FSM	ENSG00000184162.15	ENST00000539693.1	970	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	51.9572473823966	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCATTCTGCACAGAAGG	-10	True	NA	NA	False	GGGGCT	-39	NA	19203411	19201872	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19202048_19202330_19202399_19202469_19202576_19202790
H1_mix_00047698	chr19	-	644	5	NNC	ENSG00000184162.15	novel	891	4	NA	NA	0	42	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	52.5452186216786	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCGGCTGAAGGTGACGT	26	True	NA	NA	False	NA	NA	NA	19203375	19202015	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_19202041_19202329_19202399_19202469_19202576_19202790_19202882_19203022
H1_mix_00047699	chr19	-	679	5	NIC	ENSG00000184162.15	novel	970	4	NA	NA	0	35	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	52.5452186216786	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAGTGGACCGGCTGAAG	-10	True	NA	NA	False	NA	NA	NA	19203411	19202022	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_19202048_19202330_19202399_19202469_19202576_19202790_19202882_19203022
H1_mix_00047703	chr19	-	1830	7	FSM	ENSG00000213996.13	ENST00000431465.2	1829	7	0	-1	0	0	multi-exon	FALSE	canonical	1	2	junction_4	18.2520927262845	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGCCTAAGTGTTTCAG	14	True	NA	0	True	AGTAAA	-23	NA	19273265	19264363	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19264874_19266489_19266610_19267620_19267714_19267985_19268088_19269686_19270443_19271021_19271126_19273120
H1_mix_00047705	chr19	-	2053	10	FSM	ENSG00000105705.16	ENST00000589144.5	2066	10	0	13	0	2	multi-exon	FALSE	canonical	2	3	junction_8	113.900324629113	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCTAAAGGAATGTCAGG	NA	False	NA	NA	False	AATAAA	-21	NA	19303828	19276030	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19276675_19276946_19277077_19277733_19277880_19278689_19278797_19279212_19279391_19280184_19280292_19296988_19297345_19302264_19302444_19303347_19303449_19303723
H1_mix_00047707	chr19	-	876	6	FSM	ENSG00000105717.14	ENST00000558222.1	1034	6	0	158	0	-158	multi-exon	FALSE	canonical	3	7	junction_3	6.15142259969188	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGAGGCTGGCCCAGG	19	True	NA	NA	False	NA	NA	NA	19618681	19564932	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19565090_19569448_19569585_19570108_19570300_19570686_19570834_19599291_19599366_19618510
H1_mix_00047708	chr19	-	3149	6	NNC	ENSG00000064547.14	novel	2546	6	NA	NA	-421	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	100.683663024346	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAAACATTTGTTGTTAT	8197	False	NA	-26	True	AGTAAA	-23	NA	19629351	19623661	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_19624570_19626542_19627285_19627396_19627505_19627753_19627970_19628091_19628231_19628315
H1_mix_00047710	chr19	-	2445	2	FSM	ENSG00000105726.17	ENST00000467160.1	2431	2	0	-14	0	14	multi-exon	FALSE	canonical	3	558	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTCTGTGCCACACGGTGT	NA	False	NA	3	True	AATAAA	-37	NA	19647711	19645183	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19645791_19645873
H1_mix_00047711	chr19	-	3869	26	NNC	ENSG00000105726.17	novel	3849	26	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_24	106.024193465454	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGCCTCCACCTCGTCT	15	False	NA	-11	True	AATAAA	-23	NA	19663663	19645197	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_19645533_19645646_19645791_19645873_19645986_19646204_19646348_19647128_19647326_19647413_19647529_19647598_19647760_19649566_19649664_19649740_19649941_19651688_19651798_19652594_19652721_19653783_19653895_19653968_19654145_19654542_19654701_19655118_19655240_19655315_19655454_19655527_19655655_19655877_19655934_19656053_19656184_19656659_19656767_19656846_19656917_19656993_19657150_19657335_19657409_19659600_19659825_19659897_19659988_19663270
H1_mix_00047719	chr19	-	220	2	FSM	ENSG00000266904.7	ENST00000586816.1	306	2	0	86	0	-86	multi-exon	FALSE	canonical	1	2	junction_1	0	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTCTATCTTACTTTATG	10	True	NA	NA	False	TTTAAA	-32	NA	19776394	19771657	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19771806_19776322
H1_mix_00047721	chr19	-	1007	4	FSM	ENSG00000081665.14	ENST00000545006.1	1007	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	27.0678160675491	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTGTATCTTTGTGTCT	10	True	NA	NA	False	AATAAA	-13	NA	19821722	19798788	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19799451_19806030_19806127_19806941_19807069_19821600
H1_mix_00047723	chr19	-	2598	1	FSM	ENSG00000279039.1	ENST00000623510.1	2598	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGTGGATGTTATGCTC	NA	False	NA	-15	True	AATATA	-8	NA	20209789	20207191	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_20207200_20209800
H1_mix_00047724	chr19	-	1067	3	FSM	ENSG00000231205.12	ENST00000542380.6	1075	3	1	7	0	-7	multi-exon	FALSE	canonical	3	11	junction_2	1.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTATGTCTCTTGATTG	-11	True	NA	-8	True	AATAAA	-11	NA	20424969	20340268	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_20341102_20375959_20376010_20424785
H1_mix_00047725	chr19	-	8021	4	NNC	ENSG00000231205.12	novel	1564	4	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	220.486331145997	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCATTAGATTATGTG	9	True	NA	-10	True	AATAAA	-14	NA	20424921	20395954	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_20397143_20399531_20406133_20408949_20409046_20424785
H1_mix_00047727	chr19	-	3291	1	FSM	ENSG00000268416.1	ENST00000593903.1	8328	1	5063	-26	5063	26	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCCCGGCCGAATAAAAAAC	184	False	NA	NA	False	NA	NA	NA	20750187	20746896	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_20746900_20750200
H1_mix_00047728	chr19	-	4694	2	FSM	ENSG00000268119.7	ENST00000594557.1	4690	2	0	-4	0	4	multi-exon	FALSE	canonical	3	199	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAAACATTACTGAAAGT	9	True	NA	NA	False	AAAAAG	-4	NA	21463884	21452035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_21456589_21463743
H1_mix_00047729	chr19	-	4255	4	NIC	ENSG00000197020.12	novel	5691	5	NA	NA	0	-1337	combination_of_known_splicesites	FALSE	canonical	2	9	junction_1	42.055518860985	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTCATGATAGACCCCTAA	-6	True	NA	-78	True	NA	NA	NA	21767579	21724107	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_21727990_21744940_21745068_21765693_21765787_21767426
H1_mix_00047733	chr19	-	6738	4	NNC	ENSG00000198521.12	novel	5584	7	NA	NA	0	2181	intron_retention	FALSE	canonical	1	2	junction_3	23.9304547943968	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGTAGGCAAATGTAG	24	True	NA	NA	False	NA	NA	NA	21852017	21837415	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_21843327_21845391_21845507_21850937_21851537_21851904
H1_mix_00047740	chr19	-	6609	1	FSM	ENSG00000167232.14	ENST00000597458.1	2307	1	-3422	-880	-3422	880	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCATACATACAAATACGTT	NA	False	NA	11	True	AATAAA	-40	NA	23343559	23336950	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_23337000_23343600
H1_mix_00047742	chr19	-	5542	6	NIC	ENSG00000269416.7	novel	2766	8	NA	NA	-541	212	intron_retention	FALSE	canonical	3	35	junction_5	31.512537187602	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCGATTTAGTTGGAGACC	7421	False	NA	-9	True	AATAAA	-20	NA	23408632	23398884	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_23401048_23402176_23402513_23403205_23403510_23403719_23403748_23405257_23405336_23405999
H1_mix_00047743	chr19	-	3679	7	NNC	ENSG00000269416.7	novel	2766	8	NA	NA	0	212	intron_retention	FALSE	canonical	3	55	junction_4	32.8908126314257	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCGATTTAGTTGGAGACC	6	True	NA	-9	True	AATAAA	-20	NA	23416047	23398884	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_23401048_23402176_23402513_23403205_23403494_23403719_23403748_23404476_23405109_23405257_23405336_23415893
H1_mix_00047746	chr19	-	2242	5	NNC	ENSG00000197372.10	novel	595	5	NA	NA	20	-26	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	72.2819998339836	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACTTAATAAAAGCATTAT	10	True	NA	-37	True	NA	NA	NA	23687168	23652933	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_23654707_23660258_23660367_23662113_23662210_23663031_23663159_23687030
H1_mix_00047748	chr19	-	1287	6	FSM	ENSG00000261824.8	ENST00000656647.1	1295	6	0	8	0	-8	multi-exon	TRUE	canonical	1	3	junction_1	30.2747419477029	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAAAATGCTTTGTGTTG	14	True	NA	-10	True	AATAAA	-19	NA	27793901	27721709	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_27721816_27727816_27727980_27732795_27732968_27746097_27746341_27792999_27793233_27793531
H1_mix_00047749	chr19	-	1141	5	FSM	ENSG00000261824.8	ENST00000690193.1	1469	5	339	-11	-6	1	multi-exon	FALSE	canonical	2	7	junction_2	27.2981226460722	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTTAGTGTGTGAATTT	355	False	NA	3	True	AATAAA	-28	NA	27793560	27730260	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_27730708_27732795_27732968_27746080_27746341_27792999_27793233_27793531
H1_mix_00047751	chr19	-	827	1	FSM	ENSG00000242100.2	ENST00000464118.2	620	1	-91	-116	-91	116	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAAATTTTGGGAGGCCG	NA	False	NA	NA	False	AAAAAG	-33	NA	29957079	29956252	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_29956300_29957100
H1_mix_00047753	chr19	-	4248	28	NIC	ENSG00000105186.16	novel	4432	29	NA	NA	23	-6	combination_of_known_junctions	FALSE	canonical	3	4	junction_19	65.0516941216236	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGACTGTGTCATGGTAT	49	False	NA	-18	True	AGTAAA	-10	NA	32675124	32597011	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_32598379_32599703_32599777_32599971_32600051_32602014_32602127_32604262_32604425_32605834_32605955_32607634_32607833_32615657_32615781_32617588_32617634_32619259_32619380_32619493_32619554_32622421_32622620_32625873_32625967_32626711_32626828_32628082_32628166_32628721_32628850_32631401_32631495_32639355_32639489_32640306_32640386_32643122_32643200_32643286_32643353_32643430_32643485_32643571_32643632_32644324_32644480_32646458_32646616_32649681_32649793_32658913_32659046_32675070
H1_mix_00047760	chr19	-	779	5	FSM	ENSG00000130876.11	ENST00000587064.5	789	5	10	0	10	0	multi-exon	FALSE	canonical	1	1	junction_4	8.25757228245687	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGTGGCTGTGGTGAGTG	10	True	NA	NA	False	NA	NA	NA	33225788	33211426	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_33211538_33212291_33212446_33212513_33212640_33212850_33213003_33225552
H1_mix_00047762	chr19	-	1638	13	FSM	ENSG00000124299.15	ENST00000436370.7	1638	13	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_11	213.954174740501	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTTCTGATACTTTCTG	-5	True	NA	59	True	ACTAAA	-42	NA	33521788	33387023	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_33387482_33387889_33388082_33391294_33391480_33401720_33401870_33411671_33411750_33413574_33413644_33462994_33463042_33463986_33464063_33478045_33478091_33489995_33490058_33493289_33493338_33512592_33512777_33521743
H1_mix_00047763	chr19	-	714	4	NNC	ENSG00000268751.2	novel	712	3	NA	NA	13	51106	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.1723291631883	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACGATTACATGATGTTATA	16	False	NA	NA	False	NA	NA	NA	34577782	34525621	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_34525643_34576732_34576995_34577265_34577457_34577542
H1_mix_00047764	chr19	-	262	1	FSM	ENSG00000252230.1	ENST00000516421.1	86	1	45	-221	45	221	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCCCTCATACCTCAG	NA	False	NA	NA	False	NA	NA	NA	34637736	34637474	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_34637500_34637700
H1_mix_00047765	chr19	-	1865	1	FSM	ENSG00000279329.1	ENST00000623668.1	1865	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCACTCCTGAAGCCAGC	434	False	NA	NA	False	NA	NA	NA	34677581	34675716	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_34675700_34677600
H1_mix_00047766	chr19	-	759	3	FSM	ENSG00000271109.2	ENST00000661859.1	874	3	115	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	25	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGGTCTCATATTTTTAG	NA	False	NA	-2	True	AATAAA	-18	NA	34860576	34849047	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_34849550_34860173_34860303_34860448
H1_mix_00047767	chr19	-	778	3	FSM	ENSG00000271109.2	ENST00000653487.1	847	3	67	2	5	0	multi-exon	FALSE	canonical	3	26	junction_2	14.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGGTCTCATATTTTTAG	NA	False	NA	-2	True	AATAAA	-18	NA	34860680	34849047	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_34849550_34860173_34860303_34860533
H1_mix_00047768	chr19	-	904	4	FSM	ENSG00000271109.2	ENST00000665881.1	939	4	35	0	5	0	multi-exon	TRUE	canonical	2	3	junction_1	10.8423039781937	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGGTCTCATATTTTTAG	NA	False	NA	-2	True	AATAAA	-18	NA	34860680	34849047	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_34849550_34850668_34850795_34860173_34860303_34860533
H1_mix_00047769	chr19	-	2463	9	FSM	ENSG00000153902.14	ENST00000310123.8	2673	9	204	6	8	-6	multi-exon	FALSE	canonical	2	4	junction_2	2.44629822384762	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCCCCGCCCAGTGTTG	7695	False	NA	-9	True	AATAAA	-11	NA	35134855	35124518	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35125508_35126269_35126776_35126852_35127018_35131385_35131556_35131788_35131861_35131970_35132043_35133692_35133765_35134032_35134105_35134510
H1_mix_00047771	chr19	-	765	8	FSM	ENSG00000161249.21	ENST00000460327.5	762	8	0	-3	0	3	multi-exon	FALSE	canonical	3	40	junction_2	402.585115857758	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTCAAATTTTATTCTT	7667	False	NA	-7	True	AATAAA	-24	NA	35502879	35497216	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35497539_35497646_35497682_35498597_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829
H1_mix_00047772	chr19	-	883	12	FSM	ENSG00000161249.21	ENST00000467532.5	877	12	0	-6	0	3	multi-exon	FALSE	canonical	3	250	junction_5	444.622915727566	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTCAAATTTTATTCTT	6	True	NA	-7	True	AATAAA	-24	NA	35510435	35497216	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500377_35500420_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35510183_35510253_35510378
H1_mix_00047773	chr19	-	973	14	FSM	ENSG00000161249.21	ENST00000462721.5	970	14	0	-3	0	3	multi-exon	FALSE	canonical	3	221	junction_2	474.969236001585	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTCAAATTTTATTCTT	2	True	NA	-7	True	AATAAA	-24	NA	35510439	35497216	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35497539_35497646_35497682_35498715_35498764_35498873_35498898_35499957_35500030_35500377_35500420_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510378
H1_mix_00047775	chr19	-	1927	16	FSM	ENSG00000161249.21	ENST00000339686.8	1924	16	0	-3	0	3	multi-exon	FALSE	canonical	3	28	junction_12	559.41007022279	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTCAAATTTTATTCTT	-1	True	NA	-7	True	AATAAA	-24	NA	35513649	35497216	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35511410_35511594_35511762_35511814_35512420_35512478_35512589_35512791_35513049
H1_mix_00047776	chr19	-	1032	13	NIC	ENSG00000161249.21	novel	842	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	68	junction_10	470.329553492962	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	-5	True	NA	-10	True	AATAAA	-21	NA	35510510	35497219	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35506125_35506186_35509910_35509962_35510183_35510253_35510370
H1_mix_00047777	chr19	-	942	13	NIC	ENSG00000161249.21	novel	842	16	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_2	553.736016878881	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACGACTTTCTCAAATTTT	28	True	NA	-13	True	AATAAA	-18	NA	35510413	35497222	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35497539_35498715_35498764_35499957_35500030_35500377_35500420_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35506125_35506186_35509910_35509962_35510183_35510253_35510378
H1_mix_00047778	chr19	-	930	10	NIC	ENSG00000161249.21	novel	877	12	NA	NA	4	-8	intron_retention	FALSE	canonical	3	33	junction_2	555.646925819661	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTCCCTACGACTTTCT	3290	False	NA	-21	True	AATAAA	-10	NA	35510394	35497230	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35497539_35498715_35498764_35499957_35500030_35500377_35500420_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35510183
H1_mix_00047779	chr19	-	800	12	FSM	ENSG00000161249.21	ENST00000472252.6	593	12	-2	-205	0	0	multi-exon	FALSE	canonical	3	221	junction_2	439.575621790753	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAGGAGGAGCTTCCTAC	14	True	NA	-75	True	NA	NA	NA	35510427	35497284	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35497539_35497646_35497682_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35510183_35510253_35510378
H1_mix_00047780	chr19	-	841	12	FSM	ENSG00000161249.21	ENST00000480502.5	820	12	0	-21	0	0	multi-exon	FALSE	canonical	3	46	junction_7	513.215579854079	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAGGAGGAGCTTCCTAC	-18	True	NA	-75	True	NA	NA	NA	35510459	35497284	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500377_35500420_35500532_35500581_35502135_35502184_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510370
H1_mix_00047786	chr19	-	866	7	FSM	ENSG00000161249.21	ENST00000482321.5	866	7	0	0	0	0	multi-exon	FALSE	canonical	3	841	junction_6	396.932998824179	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAAAATGGCCTTCGTCC	-29	True	NA	NA	False	NA	NA	NA	35510470	35500084	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35510183_35510253_35510370
H1_mix_00047788	chr19	-	580	4	FSM	ENSG00000161249.21	ENST00000595571.5	351	4	0	-229	0	229	multi-exon	FALSE	canonical	3	14	junction_3	809.338962089158	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGCCTCTCTCTCTCCCT	26	True	NA	NA	False	AAAACA	-30	NA	35510231	35503074	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35503448_35505717_35505766_35505938_35506050_35510183
H1_mix_00047789	chr19	-	535	4	FSM	ENSG00000161249.21	ENST00000474992.5	306	4	0	-229	0	229	multi-exon	FALSE	canonical	3	64	junction_2	445.222291545346	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGCCTCTCTCTCTCCCT	18	True	NA	NA	False	AAAACA	-30	NA	35510423	35503074	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35503448_35505717_35505766_35510183_35510253_35510378
H1_mix_00047790	chr19	-	599	5	FSM	ENSG00000161249.21	ENST00000470746.6	370	5	0	-229	0	229	multi-exon	FALSE	canonical	3	31	junction_2	438.186818035413	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGCCTCTCTCTCTCCCT	5	True	NA	NA	False	AAAACA	-30	NA	35510436	35503074	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35503448_35505717_35505766_35509910_35509962_35510183_35510253_35510378
H1_mix_00047791	chr19	-	397	6	NIC	ENSG00000161249.21	novel	582	8	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	774	junction_3	433.024248743647	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	26	True	NA	-3	True	AATAAA	-17	NA	35510415	35503303	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35503448_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510378
H1_mix_00047792	chr19	-	510	8	FSM	ENSG00000161249.21	ENST00000458071.5	510	8	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_4	647.60478625754	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCCCACACTCCTGGCC	6	True	NA	-14	True	AATAAA	-6	NA	35510435	35503314	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35506125_35506186_35508204_35508241_35509910_35509962_35510183_35510253_35510370
H1_mix_00047806	chr19	-	2588	3	FSM	ENSG00000161265.15	ENST00000588892.1	2582	3	0	-6	0	0	multi-exon	FALSE	canonical	3	64	junction_2	40	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTTTGCTGTGGTTTG	3	True	NA	-5	True	AATAAA	-26	NA	35745414	35742526	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35743905_35744069_35745213_35745347
H1_mix_00047812	chr19	-	1457	3	FSM	ENSG00000004776.13	ENST00000004982.6	1460	3	0	3	0	-3	multi-exon	TRUE	canonical	1	1	junction_2	1.5	473	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACTGCTTTGTGCCTGGGC	-1	True	NA	-3	True	AATAAA	-17	NA	35757029	35754568	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35755684_35755771_35755895_35756810
H1_mix_00047813	chr19	-	2046	12	NIC	ENSG00000167604.15	novel	1834	12	NA	NA	4	289	combination_of_known_junctions	FALSE	canonical	1	2	junction_8	16.4507780719805	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGGCTCATGCCTGTA	8931	False	NA	-19	True	ATTAAA	-17	NA	35900528	35887951	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35888613_35889889_35890055_35890373_35890491_35895979_35896129_35896217_35896270_35896391_35896539_35896725_35896832_35896912_35897104_35897650_35897857_35898471_35898533_35898718_35898823_35900441
H1_mix_00047817	chr19	-	989	6	NIC	ENSG00000181392.17	novel	1377	8	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_4	82.1549755036175	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGAAGATACTAGGTGC	6	True	NA	-32	True	AATAAA	-18	NA	36008771	36003306	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_36003521_36003612_36003672_36005332_36005438_36006422_36006672_36007124_36007269_36008553
H1_mix_00047818	chr19	-	1338	8	NNC	ENSG00000181392.17	novel	1377	8	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	53.0429167788515	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTGAAGATACTAGGT	6	True	NA	-34	True	AATAAA	-16	NA	36008771	36003308	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_36003521_36003607_36003672_36005332_36005438_36006422_36006672_36006749_36006945_36007124_36007269_36008216_36008368_36008553
H1_mix_00047819	chr19	-	1137	7	NIC	ENSG00000181392.17	novel	1377	8	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_4	66.8025698108488	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTGTGAAGATACTAGG	6	True	NA	-35	True	AATAAA	-15	NA	36008771	36003309	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_36003521_36003612_36003672_36005332_36005438_36006422_36006672_36007124_36007269_36008216_36008368_36008553
H1_mix_00047820	chr19	-	654	5	NIC	ENSG00000181392.17	novel	1175	8	NA	NA	11	-9	combination_of_known_splicesites	FALSE	canonical	3	6	junction_4	93.5694928916471	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTCAAAGGATGTGTGAA	6	True	NA	-44	True	AATAAA	-6	NA	36008771	36003318	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_36003521_36003612_36003672_36005332_36005438_36006601_36006672_36008553
H1_mix_00047821	chr19	-	3328	3	FSM	ENSG00000239382.11	ENST00000471323.1	3326	3	0	-2	0	0	multi-exon	FALSE	canonical	3	173	junction_2	59	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTTTATATTTTTATT	1	True	NA	-8	True	AATAAA	-15	NA	36014212	36009119	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36009554_36010566_36013423_36014174
H1_mix_00047828	chr19	-	2044	13	FSM	ENSG00000105270.15	ENST00000593074.5	2080	13	36	0	36	0	multi-exon	FALSE	canonical	3	112	junction_5	10.0152661250491	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCCCTCGATCATTGAGG	1	True	NA	NA	False	NA	NA	NA	36032635	36016035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36016213_36016906_36016980_36017385_36017451_36017654_36017779_36017847_36017992_36018897_36019027_36019170_36019307_36024395_36024633_36026146_36026266_36026585_36026748_36026951_36027046_36027131_36027272_36032191
H1_mix_00047829	chr19	-	368	2	FSM	ENSG00000105270.15	ENST00000585466.1	368	2	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAATCCCTTGGAGCTGCG	6625	False	NA	NA	False	GGGGCT	-43	NA	36026225	36024343	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36024633_36026146
H1_mix_00047831	chr19	-	1084	3	FSM	ENSG00000161277.11	ENST00000522483.2	1084	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	64.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATACCTGGTTCTAAGGA	376	False	NA	NA	False	NA	NA	NA	36054377	36035147	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36035593_36039322_36039719_36054134
H1_mix_00047833	chr19	-	368	5	FSM	ENSG00000105258.9	ENST00000585842.5	368	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	1035.83046392737	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGAGTTTTCTGTGTTTAT	30	True	NA	-8	True	AATAAA	-15	NA	36114860	36113713	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36113818_36114014_36114067_36114176_36114252_36114338_36114413_36114797
H1_mix_00047834	chr19	-	993	5	FSM	ENSG00000105258.9	ENST00000586789.5	993	5	0	0	0	0	multi-exon	FALSE	canonical	3	2255	junction_1	89.2076229926569	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCATGCGTGAGTTTTC	8	True	NA	-17	True	AATAAA	-6	NA	36115193	36113722	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36113818_36114014_36114067_36114176_36114252_36114338_36114714_36114797
H1_mix_00047835	chr19	-	745	6	FSM	ENSG00000105258.9	ENST00000586439.1	744	6	0	-1	0	0	multi-exon	FALSE	canonical	2	15	junction_5	957.861785436709	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCATGCGTGAGTTTTC	-12	True	NA	-17	True	AATAAA	-6	NA	36115213	36113722	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36113818_36114014_36114067_36114176_36114252_36114338_36114413_36114658_36114714_36114819
H1_mix_00047836	chr19	-	1737	5	FSM	ENSG00000196357.12	ENST00000304116.10	1799	5	20	42	10	-24	multi-exon	FALSE	canonical	2	6	junction_1	1.6583123951777	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTAAATAAATGTGGGAAT	25	True	NA	-42	True	NA	NA	NA	36214645	36182317	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36183734_36194232_36194329_36195029_36195157_36201976_36202051_36214621
H1_mix_00047837	chr19	-	1010	7	NIC	ENSG00000232677.10	novel	1103	7	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	3	38	junction_5	347.439083389688	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCTGGAATAGGGCTCTT	11	True	NA	-10	True	ATTAAA	-22	NA	36331661	36313070	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_36313323_36315956_36316071_36321299_36321358_36321992_36322031_36322129_36322223_36330252_36330493_36331446
H1_mix_00047839	chr19	-	6260	6	NNC	ENSG00000232677.10	novel	1581	7	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_3	416.99669063435	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTTGGCAAAGTCATTT	10	True	NA	-33	True	NA	NA	NA	36331662	36313093	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_36313323_36313807_36316071_36316177_36317178_36324913_36327226_36330252_36330493_36331446
H1_mix_00047840	chr19	-	2862	5	NNC	ENSG00000232677.10	novel	1397	3	NA	NA	0	0	intron_retention	TRUE	non_canonical	0	0	junction_2	442.920703964039	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGAAGTACAATGACTATT	11	True	NA	-52	True	NA	NA	NA	36331718	36315575	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_36316071_36316177_36317175_36324906_36325765_36330252_36330493_36331446
H1_mix_00047841	chr19	-	1760	6	FSM	ENSG00000232677.10	ENST00000590622.5	1749	6	0	-11	0	6	multi-exon	FALSE	canonical	3	47	junction_1	403.164780207795	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTCTTTCTTTTCTTTGA	11	True	NA	-11	True	AATAAA	-21	NA	36331718	36319704	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36320761_36321299_36321358_36321992_36322031_36322129_36322226_36330252_36330493_36331446
H1_mix_00047844	chr19	-	2119	4	FSM	ENSG00000232677.10	ENST00000668768.1	2111	4	0	-8	0	6	multi-exon	FALSE	canonical	3	59	junction_1	455.738472762127	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTCAAAGTGTGGCGT	-5	True	NA	-14	True	AATAAA	-12	NA	36331734	36324917	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36325765_36326481_36327226_36330252_36330493_36331446
H1_mix_00047846	chr19	-	5193	5	FSM	ENSG00000186017.16	ENST00000434377.6	5197	5	4	0	4	0	multi-exon	FALSE	canonical	2	6	junction_4	11.202678251204	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGACTCATTTATTTTC	442	False	NA	0	True	AATAAA	-19	NA	36489431	36445118	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36450002_36472910_36473007_36473331_36473459_36476548_36476617_36489412
H1_mix_00047847	chr19	-	5184	5	FSM	ENSG00000186017.16	ENST00000452939.7	5250	5	43	23	1	-23	multi-exon	FALSE	canonical	2	11	junction_4	9.49670995661129	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGATGTTTCTTCATGA	355	False	NA	-23	True	AATAAA	-43	NA	36489518	36445141	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36450002_36472910_36473007_36473331_36473459_36476548_36476617_36489485
H1_mix_00047852	chr19	-	5149	6	FSM	ENSG00000186020.13	ENST00000334116.7	5238	6	0	89	0	-89	multi-exon	FALSE	canonical	1	1	junction_1	18.1703054459742	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAAGAGAGCCCTTACC	-10	True	NA	NA	False	NA	NA	NA	36573288	36543704	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36548323_36551876_36551978_36554669_36554797_36556103_36556198_36572332_36572393_36573139
H1_mix_00047853	chr19	-	629	1	FSM	ENSG00000267353.1	ENST00000588717.1	2197	1	1617	-49	1617	49	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAACCTCCAAATAAAATCGA	1846	False	NA	NA	False	NA	NA	NA	36774291	36773662	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36773700_36774300
H1_mix_00047855	chr19	-	4855	6	FSM	ENSG00000185869.15	ENST00000391711.8	5032	6	177	0	-93	0	multi-exon	FALSE	canonical	1	1	junction_5	2.48193472919817	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTTGGTCATCTTTACT	540	False	NA	NA	False	TATAAA	-20	NA	36916114	36888123	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_36892472_36907928_36908025_36908332_36908460_36914964_36915023_36915129_36915252_36916010
H1_mix_00047856	chr19	-	2645	3	FSM	ENSG00000245680.11	ENST00000531805.5	2971	3	326	0	326	0	multi-exon	FALSE	canonical	3	7	junction_1	1	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCTGTGAGTTGTTTGT	NA	False	NA	NA	False	AATATA	-16	NA	37190150	37184819	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_37187245_37189660_37189754_37190023
H1_mix_00047857	chr19	-	642	1	FSM	ENSG00000276846.1	ENST00000611171.1	753	1	-228	339	-228	-339	mono-exon	FALSE	NA	NA	NA	NA	NA	246	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCACATGCAACATTTAATA	1771	False	NA	NA	False	NA	NA	NA	37315848	37315206	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_37315200_37315800
H1_mix_00047858	chr19	-	6266	1	NIC	ENSG00000180479.14	novel	1700	5	NA	NA	23103	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	241	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGTCTCAAAGTGTGGCGT	NA	False	NA	-8	True	AATAAA	-12	NA	37561053	37554787	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_37554800_37561100
H1_mix_00047859	chr19	-	293	2	FSM	ENSG00000180479.14	ENST00000590390.1	293	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATACAATGGTCTTGGAGA	NA	False	NA	NA	False	NA	NA	NA	37584156	37566184	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_37566292_37583970
H1_mix_00047860	chr19	-	430	1	ISM	ENSG00000120784.17	ENST00000684514.1	5826	6	22287	1743	21551	-261	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGGCTAGTCCAAATTC	NA	False	NA	NA	False	NA	NA	NA	37633178	37632748	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_37632700_37633200
H1_mix_00047861	chr19	-	584	2	FSM	ENSG00000120784.17	ENST00000589789.1	584	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGAGTTCGTGCTGCTG	-6	True	NA	NA	False	NA	NA	NA	37655465	37654714	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_37654880_37655046
H1_mix_00047862	chr19	-	351	4	FSM	ENSG00000196381.11	ENST00000585624.1	403	4	0	52	0	-52	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAGACCCCATCTCTAAAA	101	False	NA	NA	False	NA	NA	NA	37692233	37678674	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_37678774_37686450_37686523_37691520_37691619_37692151
H1_mix_00047864	chr19	-	4430	5	FSM	ENSG00000198182.13	ENST00000355202.9	4327	5	20	-123	-18	123	multi-exon	FALSE	canonical	3	10	junction_2	27.8073731229687	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAATAAGTAAAAACCATAA	9	True	NA	NA	False	AAAAAG	-41	NA	37719741	37696247	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_37699896_37707913_37708013_37709695_37709823_37711609_37711693_37719268
H1_mix_00047865	chr19	-	2261	12	FSM	ENSG00000011332.22	ENST00000355526.10	2301	12	40	0	40	0	multi-exon	FALSE	canonical	3	15	junction_11	19.1220525195907	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTCGTTCTCCCGTCTG	5540	False	NA	-5	True	ATTAAA	-26	NA	38224182	38211005	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38212134_38212279_38212362_38213643_38213757_38216139_38216260_38216352_38216404_38217459_38217592_38217797_38217877_38218572_38218663_38218930_38219059_38222356_38222465_38222547_38222709_38224113
H1_mix_00047867	chr19	-	2289	12	FSM	ENSG00000011332.22	ENST00000456296.5	1562	12	23	-750	0	1	multi-exon	FALSE	canonical	3	37	junction_2	13.6871780501025	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCGTTCTCCCGTCTGG	27	True	NA	-4	True	ATTAAA	-27	NA	38229654	38211004	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38212134_38212279_38212362_38213643_38213757_38216139_38216260_38216352_38216404_38217459_38217592_38217797_38217877_38218572_38218663_38218930_38219059_38222356_38222465_38222547_38222709_38229558
H1_mix_00047868	chr19	-	2307	12	FSM	ENSG00000011332.22	ENST00000412732.5	2303	12	0	-4	0	1	multi-exon	FALSE	canonical	2	2	junction_11	21.9522396681132	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCGTTCTCCCGTCTGG	4	True	NA	-4	True	ATTAAA	-27	NA	38229677	38211004	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38212134_38212279_38212362_38213643_38213757_38216139_38216260_38216352_38216404_38217459_38217592_38217797_38217877_38218572_38218663_38218930_38219059_38222356_38222465_38222547_38222704_38229558
H1_mix_00047870	chr19	-	1257	9	FSM	ENSG00000167645.17	ENST00000337679.12	1257	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	519.272507937788	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGACAGCCTCTCCTTGGC	21	True	NA	-12	True	AATAAA	-17	NA	38315923	38305113	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38305508_38306913_38306991_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315868
H1_mix_00047871	chr19	-	936	4	FSM	ENSG00000167645.17	ENST00000586319.5	936	4	0	0	0	0	multi-exon	FALSE	canonical	3	1154	junction_1	22.2261107708929	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGGACAGCCTCTCCTTG	6805	False	NA	-14	True	AATAAA	-15	NA	38309139	38305115	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38305508_38307427_38307753_38308791_38308850_38308978
H1_mix_00047874	chr19	-	964	8	FSM	ENSG00000167645.17	ENST00000329420.12	964	8	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_7	345.81568760818	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCGCCCGCTGAACCTCCC	-19	True	NA	NA	False	NA	NA	NA	38315793	38305351	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38305508_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315716
H1_mix_00047878	chr19	-	734	7	FSM	ENSG00000167645.17	ENST00000589247.1	734	7	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_6	401.26276372915	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTGCTGGGCTGGTGCT	6	True	NA	NA	False	NA	NA	NA	38315768	38307470	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315722
H1_mix_00047880	chr19	-	2631	31	FSM	ENSG00000104814.13	ENST00000396857.7	2631	31	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_30	32.3455131698698	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATCTTGTTTTTCTTGG	11	True	NA	-1	True	AATAAA	-19	NA	38617953	38587640	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38587818_38593281_38593338_38595484_38595556_38595639_38595730_38595938_38596002_38596311_38596487_38597033_38597138_38597325_38597385_38597485_38597595_38599924_38599986_38600076_38600154_38601440_38601526_38605408_38605492_38605567_38605731_38606172_38606216_38607863_38607912_38607989_38608034_38608111_38608171_38609595_38609675_38609908_38610026_38611050_38611133_38611242_38611306_38612610_38612743_38613879_38613953_38614042_38614086_38614244_38614293_38614389_38614446_38616194_38616260_38617353_38617445_38617567_38617626_38617796
H1_mix_00047882	chr19	-	599	5	FSM	ENSG00000104814.13	ENST00000588938.1	610	5	0	11	0	-11	multi-exon	FALSE	canonical	3	14	junction_4	43.4590324328557	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGTTGTGGGGTGGGGTG	9214	False	NA	NA	False	NA	NA	NA	38597093	38593281	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38593338_38595484_38595730_38595938_38596002_38596311_38596487_38597033
H1_mix_00047883	chr19	-	733	7	NNC	ENSG00000104823.9	novel	1200	10	NA	NA	0	5780	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	671.315561664806	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCATAGTGGCATGCACCT	6364	False	NA	NA	False	AAAAAG	-3	NA	38817364	38809641	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_38809671_38815421_38815718_38815856_38816008_38816283_38816356_38816452_38816524_38817064_38817130_38817315
H1_mix_00047890	chr19	-	1966	11	FSM	ENSG00000104824.18	ENST00000647557.1	1948	11	0	-18	0	0	multi-exon	FALSE	canonical	0	0	junction_8	439.159697604414	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGCTTTTCTCCCTCTC	-4	True	NA	0	True	AATAAA	-43	NA	38847434	38836369	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38836781_38837383_38837480_38837593_38837652_38838396_38838599_38838893_38839016_38840095_38840560_38843841_38843915_38844007_38844105_38845649_38845736_38845852_38846091_38847315
H1_mix_00047891	chr19	-	2407	7	FSM	ENSG00000104824.18	ENST00000595164.5	2404	7	0	-3	0	0	multi-exon	FALSE	canonical	3	1239	junction_5	106.06444581794	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCACTTGCTGGGATTC	8209	False	NA	-25	True	AATAAA	-18	NA	38841749	38836394	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38836781_38837383_38837480_38837593_38837652_38838396_38838599_38838893_38839016_38840095_38840377_38840487
H1_mix_00047892	chr19	-	1875	11	NIC	ENSG00000104824.18	novel	2142	13	NA	NA	13	0	combination_of_known_splicesites	FALSE	canonical	2	75	junction_8	414.021798943003	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCACTTGCTGGGATTC	31	True	NA	-25	True	AATAAA	-18	NA	38849927	38836394	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_38836781_38837383_38837480_38837593_38837652_38838396_38838599_38838893_38839016_38840095_38840377_38840487_38840560_38843841_38843915_38845852_38846091_38847315_38847435_38849699
H1_mix_00047896	chr19	-	702	2	FSM	ENSG00000104835.15	ENST00000594259.1	690	2	0	-12	0	12	multi-exon	FALSE	canonical	3	344	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTGAACAAGGGAGATGC	NA	False	NA	8	True	AATAAA	-26	NA	38916046	38915253	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38915750_38915840
H1_mix_00047899	chr19	-	536	4	FSM	ENSG00000104835.15	ENST00000600448.5	536	4	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_2	12.328828005938	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGTCAACTTCACATTCA	8879	False	NA	NA	False	GGGGCT	-21	NA	38921874	38919798	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38919868_38920085_38920150_38921391_38921447_38921526
H1_mix_00047901	chr19	-	2274	5	ISM	ENSG00000269190.6	ENST00000292852.9	2218	6	40	2121	0	-840	5prime_fragment	FALSE	canonical	3	91	junction_1	10.3047319227625	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGGATCACCTGAGGTCA	17	True	NA	46	True	NA	NA	NA	38975702	38943521	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_38945105_38946471_38946568_38948566_38948679_38949970_38950337_38975585
H1_mix_00047906	chr19	-	444	1	FSM	ENSG00000276445.1	ENST00000617916.1	584	1	86	54	86	-54	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGTAATATTTTGGATATA	NA	False	NA	NA	False	NA	NA	NA	39813469	39813025	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_39813000_39813500
H1_mix_00047908	chr19	-	1072	9	NIC	ENSG00000105202.9	novel	1125	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	327	junction_7	758.042534674012	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATGTCTGCTGCTCATT	31	False	NA	-7	True	ATTAAA	-14	NA	39846329	39834457	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_39834563_39834667_39834814_39836555_39836669_39837710_39837844_39839034_39839206_39840232_39840328_39840413_39840516_39840619_39840788_39846290
H1_mix_00047909	chr19	-	666	5	FSM	ENSG00000105202.9	ENST00000599134.1	500	5	-127	-39	-77	0	multi-exon	FALSE	canonical	2	236	junction_3	947.502638518754	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGAGTAGATGGAGAG	NA	False	NA	NA	False	NA	NA	NA	39846456	39839034	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_39839206_39840232_39840328_39840413_39840516_39840655_39840788_39846290
H1_mix_00047910	chr19	-	8673	5	FSM	ENSG00000128000.17	ENST00000434248.6	8687	5	14	0	-12	0	multi-exon	FALSE	canonical	2	8	junction_1	16.2076370887307	264	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAACCTTGCCATTTGAG	-17	True	NA	NA	False	AATAAA	-20	NA	40056217	40028259	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40036627_40047374_40047471_40048669_40048797_40050323_40050378_40056188
H1_mix_00047912	chr19	-	585	3	FSM	ENSG00000105219.10	ENST00000593335.1	588	3	0	3	0	-2	multi-exon	FALSE	canonical	1	3	junction_1	1.5	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTGAGCGCTCTCTGC	3125	False	NA	-10	True	AATAAA	-11	NA	40223564	40222216	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40222473_40223151_40223304_40223387
H1_mix_00047913	chr19	-	5109	13	FSM	ENSG00000105221.18	ENST00000391844.8	1795	13	11	-3325	11	-27	multi-exon	FALSE	canonical	3	27	junction_12	25.7158619446356	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGTAATAAACTAGCTATC	68	False	NA	-33	True	NA	NA	NA	40285362	40230344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40233952_40235044_40235148_40235262_40235351_40235889_40236105_40236256_40236386_40237968_40238092_40238904_40238974_40240044_40240111_40241937_40242070_40242533_40242688_40255157_40255270_40256925_40257055_40285180
H1_mix_00047915	chr19	-	3221	14	NNC	ENSG00000105221.18	novel	5250	14	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	30.6804488368147	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACCAGGGCCCAGCCTG	-9	True	NA	-39	True	AATAAA	-11	NA	40285342	40232338	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_40233952_40235044_40235148_40235262_40235351_40235889_40236105_40236256_40236386_40237968_40238092_40238904_40238974_40240044_40240111_40241937_40242070_40242533_40242684_40255157_40255270_40256925_40257055_40265221_40265352_40285180
H1_mix_00047917	chr19	-	2126	9	FSM	ENSG00000160392.14	ENST00000392035.6	2126	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	32.3950227658509	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTCCCCCACTCCTTCA	3	True	NA	-16	True	AATATA	-18	NA	40348386	40321062	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40322377_40324005_40324077_40326333_40326487_40328412_40328551_40333850_40333930_40336109_40336225_40336319_40336408_40341785_40341891_40348323
H1_mix_00047918	chr19	-	2101	9	FSM	ENSG00000160392.14	ENST00000357884.8	1774	9	0	-327	0	-9	multi-exon	FALSE	canonical	2	6	junction_5	44.8852704124638	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATATATTTTTGTGACT	7102	False	NA	-42	True	NA	NA	NA	40341885	40321088	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40322377_40324005_40324077_40326333_40326487_40328412_40328551_40332521_40332644_40333850_40333930_40336109_40336225_40336319_40336408_40341838
H1_mix_00047919	chr19	-	2043	9	NNC	ENSG00000160392.14	novel	3611	9	NA	NA	10	0	intron_retention	FALSE	canonical	3	26	junction_3	29.1158783999384	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGTGACTTTCAAATCA	13	True	NA	-33	True	AATATA	-1	NA	40348376	40321079	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_40322377_40324005_40324077_40326333_40326484_40328412_40328551_40333850_40333930_40336109_40336225_40336319_40336408_40341838_40341891_40348323
H1_mix_00047921	chr19	-	4987	3	FSM	ENSG00000105227.16	ENST00000673881.1	4985	3	0	-2	0	2	multi-exon	TRUE	canonical	3	8	junction_2	6.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTTGTCTCCTCTGTGT	2	True	NA	-3	True	AATAAA	-19	NA	40404288	40393763	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40397971_40398619_40398817_40403705
H1_mix_00047922	chr19	-	5506	6	FSM	ENSG00000105227.16	ENST00000291825.11	5502	6	0	-4	0	2	multi-exon	FALSE	canonical	3	8	junction_1	13.9484766193302	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTTGTCTCCTCTGTGT	8477	False	NA	-3	True	AATAAA	-19	NA	40413364	40393763	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40398817_40403705_40403863_40407905_40408032_40408157_40408257_40408339_40408384_40413337
H1_mix_00047923	chr19	-	1490	2	FSM	ENSG00000167565.13	ENST00000599706.1	747	2	14	-757	14	53	multi-exon	FALSE	canonical	3	25	junction_1	0	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCCTAAACATCAGCACC	263	False	NA	52	True	NA	NA	NA	40444048	40440790	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40442087_40443854
H1_mix_00047924	chr19	-	767	5	FSM	ENSG00000090013.11	ENST00000643596.1	767	5	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	221.456965345414	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAACCGACTGTGTGACT	453	False	NA	-11	True	AATAAA	-30	NA	40465759	40447794	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40448047_40451363_40451493_40458173_40458245_40458380_40458546_40465609
H1_mix_00047928	chr19	-	2419	13	FSM	ENSG00000123815.13	ENST00000676962.1	2435	13	0	16	0	0	multi-exon	FALSE	canonical	3	192	junction_5	15.3866825534291	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGCTCTTTTCTCTGCG	2118	False	NA	-5	True	AATAAA	-17	NA	40714768	40691529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530
H1_mix_00047934	chr19	-	2593	13	FSM	ENSG00000123815.13	ENST00000678371.1	2606	13	0	13	0	3	multi-exon	FALSE	canonical	3	67	junction_12	44.0517372592223	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCTTTTCTCTGCGCTA	88	False	NA	-2	True	AATAAA	-20	NA	40716798	40691526	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703856_40705095_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40716586
H1_mix_00047936	chr19	-	3006	7	NIC	ENSG00000188493.15	novel	3302	6	NA	NA	13	0	intron_retention	FALSE	canonical	3	65	junction_1	19.6779628575273	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTCTGAATGTTCTGTT	33	True	NA	-9	True	AATAAA	-14	NA	40750435	40740860	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_40741440_40741693_40742771_40743904_40743976_40744066_40744197_40744558_40744684_40745129_40745199_40749480
H1_mix_00047941	chr19	-	1514	5	NIC	ENSG00000105341.19	novel	1700	6	NA	NA	10	0	intron_retention	FALSE	canonical	2	7	junction_2	145.961253420214	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGGTTTTTCTCTCCT	-11	True	NA	-1	True	ATTAAA	-19	NA	41439926	41431317	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_41432409_41433536_41433674_41436428_41436473_41438217_41438415_41439881
H1_mix_00047946	chr19	-	431	2	Intergenic	novelGene_645	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	0	295	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTCTGTCTGTGTGTC	NA	False	NA	NA	False	ATTAAA	-20	NA	41542768	41542043	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_-_41542229_41542522
H1_mix_00047947	chr19	-	2065	5	NNC	ENSG00000160570.14	novel	1905	5	NA	NA	443	57124	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	113.098132168485	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTAATTAAGTTCCTGTCA	2929	False	NA	NA	False	NA	NA	NA	42217226	42141473	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_42141499_42198597_42199830_42209699_42209841_42215132_42215253_42216679
H1_mix_00047948	chr19	-	1649	5	NNC	ENSG00000160570.14	novel	1905	5	NA	NA	-5	57124	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	115.664385184031	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTAATTAAGTTCCTGTCA	3	True	NA	NA	False	NA	NA	NA	42217762	42141473	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_42141499_42198597_42199830_42209699_42209841_42215132_42215253_42217631
H1_mix_00047949	chr19	-	1997	5	NNC	ENSG00000160570.14	novel	1905	5	NA	NA	238	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_4	107.80624981883	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCCTCTCTAGGACTCTT	2724	False	NA	-14	True	ATTAAA	-28	NA	42217431	42198597	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_42199830_42209699_42209841_42215132_42215253_42216679_42217046_42217293
H1_mix_00047957	chr19	-	3198	2	FSM	ENSG00000268643.2_ENSG00000105722.10	ENST00000596818.1	566	2	-63	-2569	-38	8	multi-exon	FALSE	canonical	3	93	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGTCCTAGGTGCTCGG	-10	True	NA	-18	True	AATAAA	-25	NA	42255170	42247560	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_42250566_42254977
H1_mix_00047958	chr19	-	410	3	NNC	ENSG00000105427.10	novel	533	4	NA	NA	2771	48195	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	122.5	264	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CATAGAAAGAAAAAAAAAAA	2797	False	NA	NA	False	NA	NA	NA	42387497	42338823	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_42338852_42387018_42387243_42387339
H1_mix_00047961	chr19	-	3425	8	FSM	ENSG00000079385.23	ENST00000403444.7	3427	8	0	2	0	-2	multi-exon	FALSE	canonical	1	2	junction_4	2.55550625999976	345	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACATCGACATGCTGCCT	-9	True	NA	-10	True	AATAAA	-11	NA	42528478	42507315	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_42509229_42510888_42510921_42512349_42512480_42518947_42519236_42521266_42521522_42521923_42522203_42527040_42527401_42528310
H1_mix_00047962	chr19	-	3093	16	NIC	ENSG00000176531.11	novel	2402	16	NA	NA	23	615	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	12.3712929352145	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGCCTTTGTACGTTCT	3340	False	NA	0	True	AATAAA	-19	NA	43504688	43474338	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_43475545_43478046_43478133_43479376_43479594_43486265_43486323_43486608_43486697_43486779_43486871_43487023_43487124_43494701_43494816_43495255_43495340_43495494_43495606_43497117_43497280_43497747_43497877_43501733_43501872_43502100_43502284_43503905_43504133_43504588
H1_mix_00047963	chr19	-	939	6	FSM	ENSG00000176531.11	ENST00000599242.1	2286	6	247	1100	23	-1100	multi-exon	FALSE	canonical	0	0	junction_5	17.3666346768739	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTCATGCCTGACCAGC	3340	False	NA	NA	False	NA	NA	NA	43504688	43497117	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_43497280_43497747_43497877_43501733_43501872_43502100_43502284_43503905_43504133_43504588
H1_mix_00047965	chr19	-	627	2	FSM	ENSG00000176531.11	ENST00000594808.1	627	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGCCCTGATGGAGCAG	3614	False	NA	NA	False	NA	NA	NA	43504414	43502165	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_43502284_43503905
H1_mix_00047966	chr19	-	615	5	NIC	ENSG00000105755.8	novel	702	6	NA	NA	3	1	combination_of_known_splicesites	FALSE	canonical	2	7	junction_4	55.8233821977852	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACTTCTACCTATTTTC	16	True	NA	-2	True	AATAAA	-18	NA	43527189	43506717	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_43506903_43507943_43508061_43508774_43508865_43511436_43511567_43527096
H1_mix_00047967	chr19	-	8148	4	NNC	ENSG00000167378.10	novel	9686	3	NA	NA	0	11448	intron_retention	FALSE	non_canonical	0	0	junction_1	16.5730705262081	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTTTAGGATGATTTGT	2	True	NA	NA	False	AAAAAG	-9	NA	43596134	43572918	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_43572951_43585936_43593368_43594808_43595341_43595981
H1_mix_00047968	chr19	-	8159	4	NNC	ENSG00000167378.10	novel	9686	3	NA	NA	-10	11448	intron_retention	FALSE	non_canonical	0	0	junction_1	16.5730705262081	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTTTAGGATGATTTGT	-8	True	NA	NA	False	AAAAAG	-9	NA	43596144	43572918	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_43572951_43585935_43593368_43594808_43595341_43595981
H1_mix_00047971	chr19	-	300	3	FSM	ENSG00000105767.3	ENST00000593506.1	302	3	0	2	0	-2	multi-exon	FALSE	canonical	3	16	junction_1	32	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACAAGGCTGTTGTGAAGA	NA	False	NA	NA	False	AATAAA	-15	NA	43625971	43624837	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_43624904_43625077_43625251_43625910
H1_mix_00047972	chr19	-	1216	7	FSM	ENSG00000011422.12	ENST00000339082.7	1254	7	0	38	0	-38	multi-exon	FALSE	canonical	3	18	junction_1	34.6333974975344	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTCATCTCCACTAAAAAT	1	True	NA	NA	False	NA	NA	NA	43670166	43646132	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_43646549_43652224_43652372_43655438_43655574_43656478_43656641_43665315_43665460_43667580_43667692_43670065
H1_mix_00047973	chr19	-	1528	6	FSM	ENSG00000011422.12	ENST00000221264.8	1610	6	81	1	81	-1	multi-exon	FALSE	canonical	2	4	junction_2	42.4405466505793	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAAGGCCAGGTATGCCCT	3905	False	NA	-22	True	CATAAA	-16	NA	43670466	43648580	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_43649144_43652224_43652372_43656478_43656641_43665315_43665460_43667580_43667692_43670065
H1_mix_00047974	chr19	-	1448	3	FSM	ENSG00000105771.14	ENST00000598860.1	574	3	-794	-80	-794	0	multi-exon	FALSE	canonical	3	152	junction_1	7.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAACCCACCAAGAGCAG	NA	False	NA	NA	False	NA	NA	NA	43735619	43733343	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_43733453_43733625_43733734_43734388
H1_mix_00047975	chr19	-	1269	4	FSM	ENSG00000159871.15	ENST00000594013.5	1519	4	250	0	250	0	multi-exon	FALSE	canonical	2	2	junction_3	2.05480466765633	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTGCAGAGACTGTGGG	12	True	NA	NA	False	NA	NA	NA	43799779	43796958	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_43797830_43798454_43798602_43798811_43798989_43799705
H1_mix_00047977	chr19	-	3634	11	NNC	ENSG00000124459.12	novel	3926	10	NA	NA	9	2	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	24.6675900728061	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCACCTCCAGTGCCAAGT	12	True	NA	-6	True	ATTAAA	-34	NA	43935269	43912628	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_43915201_43915898_43915931_43918869_43918963_43919572_43919700_43922170_43922218_43924237_43924311_43924401_43924562_43925324_43925459_43932603_43932691_43934425_43934695_43935229
H1_mix_00047979	chr19	-	949	5	FSM	ENSG00000159917.17	ENST00000589799.5	955	5	6	0	6	0	multi-exon	TRUE	canonical	0	0	junction_1	10.1334840997556	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAACTGAAGTCCTTACC	-1	True	NA	NA	False	NA	NA	NA	44305013	44236109	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_44236730_44298807_44298904_44299605_44299733_44303389_44303453_44304970
H1_mix_00047980	chr19	-	1897	1	FSM	ENSG00000279103.1	ENST00000624638.1	1897	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAGGGAAAATAAGAAA	NA	False	NA	NA	False	ATTAAA	-38	NA	44248374	44246477	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_44246500_44248400
H1_mix_00047981	chr19	-	4099	1	FSM	ENSG00000159917.17	ENST00000587921.1	4219	1	120	0	120	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTTCCTTTCATTATT	NA	False	NA	NA	False	AGTAAA	-16	NA	44290446	44286347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_44286300_44290400
H1_mix_00047982	chr19	-	2388	5	FSM	ENSG00000267508.6	ENST00000591679.5	2388	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	4.92442890089805	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCACACTGGTTCCATTTC	37	False	NA	NA	False	NA	NA	NA	44401575	44385928	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_44388103_44392339_44392467_44394519_44394541_44397198_44397257_44401567
H1_mix_00047983	chr19	-	257	2	FSM	ENSG00000267508.6	ENST00000622707.1	627	2	0	370	0	-370	multi-exon	FALSE	canonical	3	14	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGTGAAGAAACAAACTCAC	11	True	NA	NA	False	NA	NA	NA	44401601	44397033	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_44397257_44401567
H1_mix_00047984	chr19	-	4944	6	FSM	ENSG00000278318.5	ENST00000614049.5	4956	6	12	0	1	0	multi-exon	FALSE	canonical	0	0	junction_1	9.66643677887566	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTTTTTTGGCTTTTTCT	3	True	NA	0	True	ATTAAA	-21	NA	44448460	44426253	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_44430543_44432221_44432367_44442562_44442622_44442813_44443025_44447512_44447601_44448308
H1_mix_00047985	chr19	-	2866	5	FSM	ENSG00000167384.11	ENST00000590088.5	3131	5	265	0	236	0	multi-exon	FALSE	canonical	3	13	junction_4	18.2345825288105	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATACAAAGATTTCCTT	281	False	NA	NA	False	AGTAAA	-20	NA	44500259	44475638	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_44478147_44479282_44479410_44484360_44484436_44497283_44497378_44500197
H1_mix_00047986	chr19	-	3174	6	FSM	ENSG00000167384.11	ENST00000586637.5	1023	6	0	-2151	0	0	multi-exon	FALSE	canonical	2	5	junction_4	23.7267781209333	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATACAAAGATTTCCTT	-6	True	NA	NA	False	AGTAAA	-20	NA	44500522	44475638	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_44478147_44479282_44479410_44484360_44484436_44485035_44485158_44497283_44497378_44500274
H1_mix_00047988	chr19	-	759	2	FSM	ENSG00000266903.2	ENST00000591312.1	752	2	0	-7	0	2	multi-exon	FALSE	canonical	1	3	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGTATGTCTT	9607	False	NA	NA	False	ATTAAA	-21	NA	44718685	44715556	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_44716084_44718453
H1_mix_00047989	chr19	-	795	6	NNC	ENSG00000007255.10	novel	758	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	269.643764993741	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGACTCAGAGCAGTGGGG	3	True	NA	-10	True	AATAAA	-17	NA	45178237	45162932	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_45163224_45163915_45164010_45164163_45164285_45164852_45164971_45165126_45165195_45178134
H1_mix_00047991	chr19	-	1090	2	ISM	ENSG00000283632.4	ENST00000413988.3	3191	12	29232	1	29232	-1	3prime_fragment	FALSE	canonical	3	24	junction_1	0	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGGGCTGAGTCCTGAG	NA	False	NA	-3	True	AATAAA	-20	NA	45216175	45212370	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_45213358_45216072
H1_mix_00047992	chr19	-	4185	24	NNC	ENSG00000104884.17	novel	3110	24	NA	NA	0	39076	intron_retention	TRUE	non_canonical	0	0	junction_1	38.4367990814726	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGGCGTGATGGCGTAT	13	True	NA	NA	False	NA	NA	NA	45370560	45310760	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_45310793_45349778_45351722_45352208_45352353_45352505_45352650_45352745_45352817_45353082_45353156_45353241_45353335_45354729_45354852_45355664_45355729_45357269_45357372_45357473_45357544_45357629_45357700_45361523_45361643_45363742_45363912_45363985_45364120_45364234_45364332_45364423_45364548_45364837_45364955_45365041_45365159_45368629_45368744_45368929_45368993_45369069_45369148_45370132_45370233_45370535
H1_mix_00047993	chr19	-	3896	23	ISM	ENSG00000104884.17	ENST00000682414.1	3110	24	93	-576	33	0	3prime_fragment	FALSE	canonical	1	3	junction_1	37.7542072528249	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCCTGCCAGCTTCCG	78	False	NA	-67	True	AATAAA	-16	NA	45370495	45349836	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_45351031_45351467_45351722_45352208_45352353_45352505_45352650_45352745_45352817_45353082_45353156_45353241_45353335_45354729_45354852_45355664_45355729_45357269_45357372_45357473_45357544_45357629_45357700_45361523_45361643_45363742_45363912_45363985_45364120_45364234_45364332_45364423_45364548_45364837_45364955_45365041_45365159_45368629_45368744_45368929_45368993_45369069_45369148_45370132
H1_mix_00047996	chr19	-	1538	12	FSM	ENSG00000104884.17	ENST00000485403.6	1538	12	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	47.9034842329125	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTGTTGTGTTGGAATA	189	False	NA	NA	False	AATAAA	-44	NA	45370384	45358758	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45358913_45361523_45361643_45363742_45363912_45363985_45364120_45364234_45364332_45364423_45364548_45364837_45364955_45365041_45365159_45368629_45368744_45368929_45368993_45369069_45369148_45370132
H1_mix_00048000	chr19	-	1008	8	ISM	ENSG00000012061.16	ENST00000340192.11	949	9	340	0	2	0	3prime_fragment	FALSE	canonical	3	63	junction_2	127.591343830246	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGCTGCGCTGGTGCA	28	True	NA	-8	True	AATAAA	-22	NA	45423499	45409613	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_45409726_45413676_45413746_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269
H1_mix_00048003	chr19	-	1824	10	NNC	ENSG00000125744.12	novel	2063	10	NA	NA	-1710	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	41.2795348811006	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGAGGCCTCTTGTGCTTC	8741	False	NA	-4	True	AATAAA	-16	NA	45498765	45485293	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_45485790_45486054_45486114_45488470_45488518_45488636_45488707_45488847_45488987_45489345_45489554_45494165_45494421_45494525_45495006_45495094_45495140_45498740
H1_mix_00048006	chr19	-	532	4	NNC	ENSG00000125743.11	novel	596	4	NA	NA	0	35182	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3698.96859498248	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCCAGCTAATTTTTAAA	1	True	NA	NA	False	AAAAAG	-2	NA	45691940	45652277	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_45652310_45687461_45687728_45688386_45688567_45691886
H1_mix_00048008	chr19	-	2476	13	FSM	ENSG00000104936.20	ENST00000596686.5	2499	13	34	-11	-16	0	multi-exon	FALSE	canonical	3	21	junction_2	17.787323825941	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCACAGTGTCCGCGGTTT	7186	False	NA	-1	True	AATAAA	-29	NA	45779585	45769708	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45770641_45770970_45771057_45771349_45771397_45771567_45771666_45771770_45771929_45772640_45772753_45774948_45775035_45777326_45777591_45777666_45777874_45778126_45778221_45778492_45778642_45779263_45779360_45779438
H1_mix_00048009	chr19	-	8777	18	Fusion	ENSG00000185800.12_ENSG00000104936.20	novel	2754	15	NA	NA	0	0	intron_retention	TRUE	non_canonical	0	0	junction_1	44.1243132218626	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCTCCATCTGCCCAAAG	5	True	NA	-28	True	AATAAA	-2	NA	45792773	45769735	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_-_45770205_45770249_45770641_45770970_45771061_45771349_45771397_45771567_45771666_45771770_45771929_45772640_45772753_45774948_45775035_45777326_45777591_45777666_45777874_45778126_45778221_45778492_45778642_45779263_45779360_45779438_45779523_45779777_45784291_45785593_45786872_45790904_45791088_45792315
H1_mix_00048010	chr19	-	8824	19	Fusion	ENSG00000185800.12_ENSG00000104936.20	novel	2754	15	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_1	42.7727269745513	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCACCCCCGACCCTCGC	5	True	NA	-56	True	NA	NA	NA	45792773	45769763	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_-_45770205_45770249_45770641_45770970_45771061_45771349_45771397_45771567_45771666_45771770_45771929_45772640_45772753_45774948_45775035_45777326_45777591_45777666_45777874_45778126_45778221_45778492_45778642_45779263_45779360_45779438_45779523_45779777_45784291_45784640_45784716_45785593_45786872_45790904_45791088_45792315
H1_mix_00048015	chr19	-	5182	26	FSM	ENSG00000125755.19	ENST00000600237.5	5164	26	0	-18	0	-2	multi-exon	FALSE	canonical	2	8	junction_13	70.3505963016661	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGGGATGGCGGGCC	7391	False	NA	12	True	AATAAA	-35	NA	45855807	45815429	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45815698_45815850_45816184_45816481_45816578_45816797_45816975_45817958_45818147_45821383_45821486_45822755_45822847_45823371_45823473_45823766_45823876_45825170_45825332_45826225_45826374_45827509_45827624_45827836_45827919_45829054_45829206_45830053_45830205_45831383_45831589_45835077_45835229_45838460_45838616_45842249_45842490_45844029_45844201_45847751_45848002_45848749_45848877_45852311_45852386_45852481_45852536_45854174_45854241_45854390
H1_mix_00048017	chr19	-	1688	1	FSM	ENSG00000169515.8	ENST00000307522.5	3236	1	1496	52	1496	-52	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTCAAAACACAGATTCTG	1543	False	NA	-14	True	AGTAAA	-16	NA	46412068	46410380	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_46410400_46412100
H1_mix_00048018	chr19	-	817	1	FSM	ENSG00000277531.3	ENST00000617053.3	4240	1	3360	63	3360	-63	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGATTGAGATGCTCTT	3334	False	NA	NA	False	NA	NA	NA	46425576	46424759	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_46424800_46425600
H1_mix_00048019	chr19	-	1005	3	FSM	ENSG00000230510.8	ENST00000593359.2	506	3	-498	-1	-229	1	multi-exon	FALSE	canonical	1	2	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAGCCACCAACCTTGG	8997	False	NA	NA	False	AATAAA	-12	NA	46601429	46525474	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_46525785_46526924_46527073_46600882
H1_mix_00048022	chr19	-	260	1	FSM	ENSG00000211513.5	ENST00000390179.5	53	1	16	-223	16	223	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGACAGAGGTTGCAGTG	7782	False	NA	NA	False	NA	NA	NA	46709329	46709069	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_46709100_46709300
H1_mix_00048024	chr19	-	2694	8	FSM	ENSG00000090372.15	ENST00000594581.5	2692	8	0	-2	0	0	multi-exon	FALSE	canonical	3	713	junction_3	77.2818853025621	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGTGACGGTGCCATCT	7196	False	NA	-7	True	AATAAA	-14	NA	46726265	46719510	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_46720339_46720535_46720772_46721985_46722341_46722809_46722951_46723113_46723285_46724806_46724929_46725331_46725380_46725472
H1_mix_00048033	chr19	-	857	1	FSM	ENSG00000286669.1	ENST00000671594.1	628	1	-77	-152	-77	152	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGAGCTACTCCGGAGACT	826	False	NA	NA	False	AATACA	-38	NA	47256554	47255697	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_47255700_47256600
H1_mix_00048034	chr19	-	2104	13	FSM	ENSG00000105419.18	ENST00000331559.9	2104	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	67.3997197488404	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCAACTGGAGTTCTTG	-8	True	NA	-13	True	GATAAA	-17	NA	47419523	47403123	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_47403554_47406459_47406527_47406887_47406972_47407078_47407138_47407351_47407567_47409098_47409248_47409435_47409548_47414716_47414816_47415050_47415102_47416651_47416703_47416803_47416964_47417177_47417351_47419069
H1_mix_00048036	chr19	-	1919	13	FSM	ENSG00000105419.18	ENST00000561293.5	1918	13	0	-1	0	0	multi-exon	FALSE	canonical	3	11	junction_5	63.0030863441537	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCACCAACTGGAGTTCTT	227	False	NA	-14	True	GATAAA	-16	NA	47419288	47403124	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_47403554_47406459_47406527_47406887_47406972_47407078_47407138_47407351_47407567_47409098_47409248_47409435_47409548_47414716_47414867_47415050_47415102_47416651_47416703_47416803_47416964_47417177_47417351_47419069
H1_mix_00048041	chr19	-	4955	10	FSM	ENSG00000118160.14	ENST00000236877.11	4959	10	1	3	1	-3	multi-exon	FALSE	canonical	2	8	junction_4	4.78423336480244	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACAGGAGGAGGGGTGTGT	14	True	NA	-7	True	AATAAA	-21	NA	47471892	47428019	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_47430466_47432166_47432446_47437461_47437562_47437848_47437974_47441168_47441187_47441336_47441441_47447808_47448232_47456929_47457595_47465728_47466420_47471788
H1_mix_00048042	chr19	-	570	5	FSM	ENSG00000118162.14	ENST00000594139.5	570	5	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_2	9.78199877325692	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGGAATTGGGCGGTGGG	7480	False	NA	NA	False	AAAACA	-39	NA	47483578	47480556	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_47480834_47480957_47481034_47483160_47483216_47483294_47483380_47483501
H1_mix_00048043	chr19	-	558	5	FSM	ENSG00000105402.8	ENST00000594217.5	554	5	0	-4	0	0	multi-exon	FALSE	canonical	3	70	junction_1	274.871219846677	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCTCTTCCTCCTCACC	5459	False	NA	-5	True	AATAAA	-19	NA	47492044	47487637	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_47487891_47488234_47488390_47489710_47489762_47490787_47490857_47492014
H1_mix_00048044	chr19	-	1418	9	FSM	ENSG00000105402.8	ENST00000594001.5	1417	9	0	-1	0	0	multi-exon	FALSE	canonical	3	182	junction_8	180.415795802363	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGGCCCAAGAAAGAAAAT	-35	True	NA	-46	True	NA	NA	NA	47515058	47487678	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_47488390_47489710_47489762_47490787_47490857_47492014_47492120_47492960_47493046_47493118_47493175_47493415_47493494_47495549_47495597_47514842
H1_mix_00048045	chr19	-	548	6	FSM	ENSG00000105402.8	ENST00000593905.5	548	6	0	0	0	0	multi-exon	FALSE	canonical	3	677	junction_2	33.7899393311086	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGCCCACGAGGAGCAGA	3863	False	NA	NA	False	NA	NA	NA	47493640	47489753	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_47489762_47490787_47490857_47492014_47492120_47492960_47493046_47493118_47493175_47493415
H1_mix_00048048	chr19	-	3425	29	NNC	ENSG00000105486.14	novel	3125	28	NA	NA	-15	57961	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	110.745502511527	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	48170618	48057483	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_48057510_48115444_48115733_48115872_48115966_48117637_48117782_48119136_48119191_48121169_48121323_48122933_48123017_48123173_48123319_48127276_48127349_48127909_48128021_48131075_48131172_48132981_48133098_48133980_48134067_48135679_48135780_48136033_48136126_48137007_48137085_48137521_48137689_48139970_48140144_48143542_48143600_48143882_48143964_48149762_48149842_48150087_48150211_48151231_48151340_48153871_48153968_48157013_48157141_48161371_48161508_48162261_48162352_48165549_48165624_48170240
H1_mix_00048050	chr19	-	4103	28	FSM	ENSG00000105486.14	ENST00000594759.5	4102	28	0	-1	0	0	multi-exon	FALSE	canonical	3	30	junction_4	118.643059565195	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACTTTGTGACAGGGTCT	22	True	NA	-11	True	AATAAA	-14	NA	48170326	48115448	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48115733_48115872_48115966_48117637_48117782_48119136_48119191_48120166_48121323_48122933_48123017_48123173_48123319_48127276_48127349_48127909_48128021_48131075_48131172_48132981_48133098_48133980_48134067_48135679_48135780_48136033_48136126_48137007_48137085_48137521_48137689_48139970_48140144_48143542_48143600_48143882_48143964_48149762_48149842_48150087_48150211_48151231_48151337_48153871_48153968_48157013_48157141_48161371_48161508_48162261_48162352_48165549_48165624_48170240
H1_mix_00048057	chr19	-	2016	11	FSM	ENSG00000105483.18	ENST00000517510.5	2016	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	20.4795019470689	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCGACTTAATAACTGTG	1	True	NA	NA	False	AATAGA	-18	NA	48255898	48203631	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48204244_48215339_48215385_48218870_48219013_48221729_48221856_48230437_48230701_48230776_48231007_48231659_48231811_48234402_48234544_48240961_48241064_48249750_48249848_48255791
H1_mix_00048059	chr19	-	3021	5	FSM	ENSG00000105483.18	ENST00000377461.8	3325	5	304	0	304	0	multi-exon	FALSE	canonical	2	3	junction_2	15.3704261489394	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATATTTTGTTTTTTTCCT	9184	False	NA	-24	True	AATAAA	-30	NA	48231810	48209643	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48211976_48215339_48215385_48230437_48230701_48230776_48231007_48231659
H1_mix_00048060	chr19	-	1878	12	FSM	ENSG00000105483.18	ENST00000521613.5	1903	12	25	0	-9	0	multi-exon	FALSE	canonical	3	15	junction_9	15.9077921547797	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGGCATGTACCTATTG	-22	True	NA	NA	False	NA	NA	NA	48255921	48211565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48211976_48215339_48215385_48218870_48219013_48221729_48221856_48230437_48230701_48230776_48231007_48231659_48231811_48232452_48232494_48234402_48234544_48240961_48241064_48249750_48249848_48255791
H1_mix_00048067	chr19	-	413	3	NIC	ENSG00000105483.18	novel	614	5	NA	NA	5	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	42	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCATTGGTTTATGTAC	-7	True	NA	-7	True	ATTAAA	-13	NA	48255906	48238336	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_48238533_48240961_48241064_48255791
H1_mix_00048069	chr19	-	810	3	FSM	ENSG00000161558.11	ENST00000600816.1	810	3	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	0.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTCCGATCACTTCCGA	NA	False	NA	NA	False	NA	NA	NA	48342991	48333275	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48333434_48334007_48334198_48342529
H1_mix_00048070	chr19	-	1535	6	NNC	ENSG00000105438.9	novel	1550	5	NA	NA	0	25681	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	434.438488166046	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGGTGCTGTGGCTCAC	7319	False	NA	NA	False	NA	NA	NA	48391502	48356893	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_48356924_48382570_48383328_48384229_48384483_48389552_48389712_48390423_48390525_48391267
H1_mix_00048071	chr19	-	1533	6	NNC	ENSG00000105438.9	novel	1550	5	NA	NA	0	6014	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	434.438488166046	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTCCCGCCTCTCACCA	7319	False	NA	NA	False	NA	NA	NA	48391502	48376560	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_48376587_48382568_48383328_48384229_48384483_48389552_48389712_48390423_48390525_48391267
H1_mix_00048072	chr19	-	1036	6	FSM	ENSG00000063177.13	ENST00000549273.5	1036	6	0	0	0	0	multi-exon	FALSE	canonical	3	3652	junction_5	620.377111118713	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCTACTCTCTTATTAAAA	3	True	NA	-40	True	NA	NA	NA	48619177	48615365	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48615947_48616078_48616203_48616725_48616825_48617315_48617424_48617790_48617878_48619140
H1_mix_00048073	chr19	-	974	4	FSM	ENSG00000105538.10	ENST00000601530.1	1597	4	621	2	621	-2	multi-exon	FALSE	canonical	3	52	junction_3	14.3061758225833	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGCGCCTCGATTGTTAA	4495	False	NA	-25	True	AATAAA	-16	NA	48724960	48720588	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48720998_48721853_48722002_48724336_48724510_48724716
H1_mix_00048075	chr19	-	1913	8	ISM	ENSG00000105538.10	ENST00000222145.9	3199	12	11029	4	-4000	-2	3prime_fragment	FALSE	canonical	3	52	junction_3	10	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGCGCCTCGATTGTTAA	NA	False	NA	-25	True	AATAAA	-16	NA	48729581	48720588	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_48720998_48721853_48722002_48724336_48724510_48724716_48724961_48726784_48726889_48727006_48727159_48727392_48727431_48728936
H1_mix_00048076	chr19	-	4218	4	NIC	ENSG00000174951.12	novel	815	3	NA	NA	-9	-1	intron_retention	FALSE	canonical	2	3	junction_3	31.6789449880446	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGTGTCTCTGTAGCTTT	NA	False	NA	-6	True	ATTAAA	-15	NA	48755399	48748011	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_48751284_48752489_48753123_48753324_48753564_48755325
H1_mix_00048078	chr19	-	3567	11	NNC	ENSG00000105552.15	novel	1664	11	NA	NA	-1304	14926	intron_retention	TRUE	non_canonical	0	0	junction_1	126.733933893019	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAGAAGAAAATAAAAAGA	1957	False	NA	NA	False	AAAAAG	-1	NA	48809096	48780135	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_48780166_48795065_48795465_48796427_48796503_48796577_48796719_48796936_48797023_48797190_48797334_48799674_48799839_48799980_48800101_48800186_48800298_48806516_48806718_48806999
H1_mix_00048079	chr19	-	2886	12	NNC	ENSG00000105552.15	novel	2041	12	NA	NA	-1304	14926	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	153.787230928625	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAGAAGAAAATAAAAAGA	1957	False	NA	NA	False	AAAAAG	-1	NA	48809096	48780135	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_48780166_48795065_48795465_48796427_48796503_48796577_48796719_48796936_48797023_48797190_48797334_48799674_48799839_48799980_48800101_48800186_48800298_48806516_48806718_48806999_48807075_48807755
H1_mix_00048083	chr19	-	1007	7	NIC	ENSG00000087076.9	novel	1050	9	NA	NA	-97	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_4	82.398759429712	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGGATATCGTTATAT	58	False	NA	-8	True	CATAAA	-19	NA	48836607	48813017	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_48813349_48813455_48813553_48813662_48813731_48815036_48815142_48834275_48834359_48835804_48835844_48836323
H1_mix_00048084	chr19	-	908	6	NIC	ENSG00000087076.9	novel	1050	9	NA	NA	-97	-1	combination_of_known_splicesites	FALSE	canonical	3	8	junction_1	112.86345732787	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGGAGGATATCGTTATA	58	False	NA	-9	True	CATAAA	-18	NA	48836607	48813018	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_48813349_48815036_48815142_48832665_48832733_48834275_48834359_48835804_48835844_48836323
H1_mix_00048086	chr19	-	2563	18	NIC	ENSG00000105559.12	novel	3073	20	NA	NA	126	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	28.4682789535018	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAATAGCTTTCTTTCTGT	8043	False	NA	-7	True	ATTAAA	-15	NA	48868328	48837096	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_48837552_48838016_48838130_48845369_48845447_48845516_48845617_48847899_48848041_48852227_48852327_48853681_48853832_48854006_48854088_48854216_48854265_48857421_48857497_48858859_48859140_48859468_48859685_48860349_48860460_48861400_48861502_48861619_48861693_48865502_48865611_48867536_48867627_48868082
H1_mix_00048087	chr19	-	2614	17	FSM	ENSG00000105559.12	ENST00000355496.9	2614	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	32.5969707181511	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAATAGCTTTCTTTCTGT	7917	False	NA	-7	True	ATTAAA	-15	NA	48868454	48837096	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48837552_48838016_48838130_48845369_48845447_48845516_48845617_48847899_48848041_48852227_48852327_48853681_48853832_48854006_48854088_48854216_48854265_48858859_48859140_48859468_48859685_48860349_48860460_48861400_48861502_48861619_48861693_48865502_48865611_48867536_48867627_48868082
H1_mix_00048088	chr19	-	667	2	FSM	ENSG00000105559.12	ENST00000601146.1	667	2	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGGCCCGGGAGGGGAATG	NA	False	NA	-93	True	NA	NA	NA	48838314	48837182	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48837552_48838016
H1_mix_00048089	chr19	-	494	3	FSM	ENSG00000105559.12	ENST00000597406.1	644	3	0	150	0	-150	multi-exon	FALSE	canonical	3	113	junction_1	12	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCATCTGACCATCAGGGA	7810	False	NA	NA	False	NA	NA	NA	48852306	48845342	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48845617_48847899_48848041_48852227
H1_mix_00048095	chr19	-	565	4	FSM	ENSG00000104812.15	ENST00000472004.5	578	4	0	13	0	-13	multi-exon	FALSE	canonical	3	183	junction_3	8.17856276425687	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATGAAGATCTCCCCAGG	7683	False	NA	NA	False	NA	NA	NA	48977986	48970762	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48971024_48974212_48974340_48974619_48974734_48977923
H1_mix_00048096	chr19	-	718	3	FSM	ENSG00000104812.15	ENST00000457974.1	718	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	68.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGCCCCGTCTGACACAT	271	False	NA	NA	False	NA	NA	NA	48993283	48987193	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_48987386_48991301_48991539_48992994
H1_mix_00048097	chr19	-	1963	2	NNC	ENSG00000225950.8	novel	813	4	NA	NA	14	-75	intron_retention	FALSE	canonical	2	2	junction_1	0	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATAGCCACTATTTACTG	8	True	NA	-27	True	NA	NA	NA	49064827	49061140	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_49062010_49063733
H1_mix_00048098	chr19	-	2156	12	NIC	ENSG00000074219.14	novel	2175	13	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	83	junction_11	145.067040643255	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGGATTTATTTGAGGTT	18	True	NA	-6	True	GATAAA	-19	NA	49362407	49340592	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355311_49355420_49357251_49357315_49359434_49359500_49359843_49360082_49362332
H1_mix_00048099	chr19	-	2122	12	NNC	ENSG00000074219.14	novel	2167	12	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_11	187.518153391184	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGGATTTATTTGAGGT	16	True	NA	-7	True	GATAAA	-18	NA	49361490	49340593	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355302_49355420_49357251_49357315_49359434_49359500_49359843_49360082_49361457
H1_mix_00048100	chr19	-	2016	11	NIC	ENSG00000074219.14	novel	2164	12	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	58	junction_7	178.777962847774	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGGATTTATTTGAGGT	9	True	NA	-7	True	GATAAA	-18	NA	49362416	49340593	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49357251_49357315_49359434_49359500_49359843_49360082_49362372
H1_mix_00048103	chr19	-	2967	12	FSM	ENSG00000104888.10	ENST00000221485.8	2949	12	-14	-4	-14	4	multi-exon	TRUE	canonical	2	3	junction_9	2.7393671224217	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTCTTGGCTGTGGAGGT	6638	False	NA	2	True	AATAAA	-22	NA	49441541	49429396	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49430813_49431014_49431143_49431337_49431449_49432518_49432652_49432810_49432961_49433725_49433869_49433959_49434047_49434601_49434690_49434767_49434883_49435167_49435287_49436548_49436802_49441317
H1_mix_00048104	chr19	-	633	7	FSM	ENSG00000104872.11	ENST00000600875.5	633	7	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	327.000849472223	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTCTCTGACTGGGGA	3904	False	NA	-8	True	AATAAA	-15	NA	49449587	49446298	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49446424_49446550_49446596_49447023_49447100_49447337_49447468_49447826_49447909_49448000_49448063_49449474
H1_mix_00048115	chr19	-	2615	8	FSM	ENSG00000142546.14	ENST00000598820.5	2615	8	0	0	0	0	multi-exon	FALSE	canonical	3	469	junction_7	68.6707613863991	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACGTGGCGCCTTCATTCG	36	False	NA	-4	True	AATAAA	-18	NA	49580535	49555710	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49555823_49556316_49556426_49556548_49556737_49556874_49556994_49557089_49558979_49559933_49560040_49560621_49560693_49580514
H1_mix_00048117	chr19	-	1562	8	FSM	ENSG00000126456.16	ENST00000601291.5	1556	8	0	-6	0	3	multi-exon	FALSE	canonical	3	50	junction_2	149.753811576309	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGTGTCTGGTGTTGGGT	-22	True	NA	1	True	AATAAA	-23	NA	49665802	49659565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49659834_49660712_49660845_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664673_49664847_49665630
H1_mix_00048118	chr19	-	1130	6	FSM	ENSG00000126456.16	ENST00000599144.5	1117	6	0	-13	0	3	multi-exon	FALSE	canonical	3	12	junction_5	169.085303914917	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGTGTCTGGTGTTGGGT	104	False	NA	1	True	AATAAA	-23	NA	49665731	49659565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49665630
H1_mix_00048119	chr19	-	1468	8	FSM	ENSG00000126456.16	ENST00000598808.5	1468	8	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_7	186.356581612252	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGCCTCCAACCCCCCTG	-7	True	NA	-65	True	NA	NA	NA	49665842	49659631	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664552_49664674_49665630
H1_mix_00048122	chr19	-	1386	10	NIC	ENSG00000010361.14	novel	1728	11	NA	NA	4	-1	combination_of_known_splicesites	FALSE	canonical	3	40	junction_5	68.8446094252381	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAACCCTGGTGTCTTCTCT	7074	False	NA	-10	True	AATAAA	-37	NA	49813152	49806869	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_49807375_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49811362_49811468_49811630_49811700_49812250_49812336_49812614_49812737_49812995
H1_mix_00048123	chr19	-	1460	10	NIC	ENSG00000010361.14	novel	1632	11	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	3	40	junction_5	85.6038824549332	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAACCCTGGTGTCTTCTCT	6977	False	NA	-10	True	AATAAA	-37	NA	49813249	49806869	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_49807375_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49811362_49811468_49811630_49811700_49812250_49812336_49812637_49812737_49812995
H1_mix_00048124	chr19	-	1675	10	NIC	ENSG00000010361.14	novel	1632	11	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	3	38	junction_8	87.8091364519914	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAACCCTGGTGTCTTCTCT	9	True	NA	-10	True	AATAAA	-37	NA	49813273	49806869	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_49807375_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49811362_49811468_49811630_49811700_49812250_49812336_49812446_49812737_49812995
H1_mix_00048125	chr19	-	1483	10	FSM	ENSG00000010361.14	ENST00000525370.5	1483	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	92.5868294502751	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAAAGTCCCAGGCATC	7070	False	NA	-33	True	AATAAA	-14	NA	49813156	49806892	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49807375_49808413_49808492_49808573_49808639_49808716_49808824_49809162_49809259_49809377_49809576_49811362_49811468_49811630_49811700_49812614_49812737_49812995
H1_mix_00048132	chr19	-	2111	14	FSM	ENSG00000039650.12	ENST00000594661.5	2111	14	0	0	0	0	multi-exon	TRUE	canonical	3	220	junction_7	23.1066475232413	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCCGGCATTTTGCTG	-20	True	NA	-2	True	AATAAA	-17	NA	49867010	49861203	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49861366_49861448_49861511_49861607_49861696_49861771_49861882_49862043_49862106_49862184_49862282_49862370_49862464_49862537_49862609_49862689_49862739_49863688_49863761_49863963_49864072_49864178_49864404_49865126_49865427_49866398
H1_mix_00048137	chr19	-	3357	3	NNC	ENSG00000213024.12	novel	3361	3	NA	NA	47	27221	intron_retention	FALSE	non_canonical	0	0	junction_1	195	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAATAACAACAACAAAAAAA	3236	False	NA	NA	False	NA	NA	NA	49929362	49879603	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_49879864_49906824_49909885_49929325
H1_mix_00048138	chr19	-	3591	2	FSM	ENSG00000213024.12	ENST00000596217.1	3590	2	0	-1	0	0	multi-exon	FALSE	canonical	3	141	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGCTGTGTGCTTTGCGTTT	-17	True	NA	-2	True	NA	NA	NA	49929504	49908104	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49909885_49927693
H1_mix_00048139	chr19	-	1927	15	FSM	ENSG00000105053.11	ENST00000316763.8	1923	15	0	-4	0	4	multi-exon	FALSE	canonical	3	50	junction_14	41.9129321039583	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAGTCAGTTATCTGTAA	14	True	NA	-3	True	AATAAA	-18	NA	50025372	49976463	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49976785_49979082_49979243_49980954_49981014_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50009235_50009386_50016023_50016164_50020584_50020648_50025266
H1_mix_00048140	chr19	-	1751	13	NIC	ENSG00000105053.11	novel	1923	15	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	3	19	junction_8	52.3632478196514	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGGAGTCAGTTATCTGT	5463	False	NA	-5	True	AATAAA	-16	NA	50020646	49976465	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_49976785_49979082_49979243_49980954_49981014_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_50000789_50000855_50007568_50007827_50009235_50009386_50016023_50016164_50020584
H1_mix_00048141	chr19	-	1600	12	NIC	ENSG00000105053.11	novel	1923	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_8	66.0884706315196	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAGGAGTCAGTTATCT	5462	False	NA	-7	True	AATAAA	-14	NA	50020647	49976467	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_49976785_49979082_49979243_49980954_49981014_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_50000789_50000855_50007568_50007827_50016023_50016164_50020584
H1_mix_00048142	chr19	-	1772	14	FSM	ENSG00000105053.11	ENST00000377011.6	1749	14	3	-26	0	2	multi-exon	FALSE	canonical	3	50	junction_13	55.4068331504636	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGGAGTCAGTTATCTGT	17	True	NA	-5	True	AATAAA	-16	NA	50025369	49976465	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49976785_49979082_49979243_49980954_49981014_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50016023_50016164_50020584_50020648_50025266
H1_mix_00048143	chr19	-	2119	13	NIC	ENSG00000105053.11	novel	1831	13	NA	NA	-21	188	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	48.7119509634614	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGCCATTCTCCTGCCTC	3	True	NA	NA	False	NA	NA	NA	50025460	49981465	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_49982189_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50009235_50009386_50016023_50016164_50020584_50020648_50025345
H1_mix_00048144	chr19	-	1979	12	FSM	ENSG00000105053.11	ENST00000593919.5	1979	12	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_11	26.3259919326826	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCATTGTGTGTGGGAAAC	14	True	NA	NA	False	NA	NA	NA	50025372	49987700	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50009235_50009386_50016023_50016164_50020584_50020648_50025345
H1_mix_00048146	chr19	-	420	2	FSM	ENSG00000131400.8	ENST00000599181.1	3288	2	1606	1262	1545	9	multi-exon	FALSE	canonical	2	3	junction_1	0	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGGACTTGGTCTCCTG	8067	False	NA	NA	False	NA	NA	NA	50361237	50359739	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_50359863_50360940
H1_mix_00048150	chr19	-	737	4	FSM	ENSG00000161677.12	ENST00000595669.5	733	4	0	-4	0	0	multi-exon	FALSE	canonical	2	5	junction_2	14.3372087784044	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCCTGTGTCTGACG	4	True	NA	-6	True	AATAAA	-18	NA	50511220	50505997	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_50506273_50506377_50506573_50510285_50510449_50511116
H1_mix_00048153	chr19	-	836	3	ISM	ENSG00000167747.16	ENST00000596287.6	1364	4	2338	504	1	0	3prime_fragment	FALSE	canonical	3	92	junction_1	1026.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGAGACCTGGGCCTGGCT	2701	False	NA	NA	False	NA	NA	NA	50802257	50798193	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_50798925_50799293_50799358_50802216
H1_mix_00048154	chr19	-	904	3	FSM	ENSG00000167747.16	ENST00000597705.6	1394	3	0	490	0	0	multi-exon	FALSE	canonical	3	62	junction_1	548.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGAGACCTGGGCCTGGCT	289	False	NA	NA	False	NA	NA	NA	50804669	50798193	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_50798959_50802216_50802258_50804571
H1_mix_00048155	chr19	-	351	1	FSM	ENSG00000221241.1	ENST00000408314.1	91	1	-266	6	-266	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCCTGGCTCTGGGGAGG	5160	False	NA	NA	False	NA	NA	NA	50799798	50799447	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_50799400_50799800
H1_mix_00048156	chr19	-	1167	3	FSM	ENSG00000167748.11	ENST00000596300.1	912	3	-139	-116	-139	-7	multi-exon	FALSE	canonical	3	15	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATCCAATGTGTGTCACG	6089	False	NA	-9	True	AGTAAA	-9	NA	50820988	50819154	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_50819350_50819898_50820036_50820153
H1_mix_00048157	chr19	-	1517	6	FSM	ENSG00000167754.13	ENST00000336334.8	1513	6	0	-4	0	4	multi-exon	TRUE	canonical	1	3	junction_2	1.35646599662505	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTCCTCCCTGTGC	-5	True	NA	0	True	AATAAA	-18	NA	50953038	50943298	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_50943787_50948639_50948774_50948858_50949116_50949854_50950117_50952584_50952669_50952746
H1_mix_00048158	chr19	-	1701	6	FSM	ENSG00000167755.15	ENST00000376851.7	1708	6	8	-1	8	1	multi-exon	TRUE	canonical	1	1	junction_5	1.93907194296653	221	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGCTTTTTGCTTTGATT	617	False	NA	1	True	AATAAA	-20	NA	50968964	50958629	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_50959317_50961743_50961881_50963301_50963550_50967168_50967326_50968064_50968113_50968540
H1_mix_00048159	chr19	-	1902	5	FSM	ENSG00000169035.12	ENST00000597707.5	1054	5	32	-880	32	3	multi-exon	FALSE	canonical	1	3	junction_4	1.4142135623731	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGATCTAAGATTGGAGA	52	False	NA	NA	False	AATAAA	-17	NA	50984006	50976478	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_50977692_50979787_50979925_50980239_50980488_50981766_50981915_50983850
H1_mix_00048160	chr19	-	1158	5	FSM	ENSG00000129451.12	ENST00000601467.1	1428	5	270	0	270	0	multi-exon	FALSE	canonical	0	0	junction_4	18.0468141232739	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTCACCCAACCTGACTT	9441	False	NA	NA	False	NA	NA	NA	51018579	51014509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_51014953_51015416_51015551_51015881_51016157_51017109_51017291_51018454
H1_mix_00048161	chr19	-	488	2	FSM	ENSG00000129451.12	ENST00000599987.1	557	2	0	69	0	-69	multi-exon	FALSE	canonical	3	42	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGAGCTGGGGCTCTGAG	9291	False	NA	NA	False	NA	NA	NA	51017322	51015881	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_51016157_51017109
H1_mix_00048162	chr19	-	1970	6	NNC	ENSG00000167759.13	novel	1820	5	NA	NA	-661	-2	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_5	7.33757453113766	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATTATTTGCATGGTTC	15	False	NA	-4	True	AATAAA	-18	NA	51065775	51055627	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_51056776_51058537_51058675_51059824_51060094_51060432_51060620_51065015_51065107_51065637
H1_mix_00048164	chr19	-	587	3	ISM	ENSG00000160318.6	ENST00000601435.1	575	5	744	-1	-258	-1	3prime_fragment	FALSE	canonical	2	4	junction_2	12.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTGCGGCTCCGCGTGCTT	4712	False	NA	-5	True	AATAAA	-18	NA	51368235	51367098	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_51367216_51367456_51367577_51367885
H1_mix_00048165	chr19	-	355	2	FSM	ENSG00000161551.15	ENST00000639416.1	334	2	0	-21	0	13	multi-exon	FALSE	canonical	3	43	junction_1	0	1686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGTCCTAACTCATTCT	NA	False	NA	12	True	NA	NA	NA	51861079	51855788	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_51855968_51860903
H1_mix_00048166	chr19	-	6411	11	Fusion	ENSG00000161551.15_ENSG00000198093.11	novel	1865	7	NA	NA	0	63	intron_retention	FALSE	canonical	3	37	junction_6	87.3927342517672	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGCGATACTAGGGCAC	-3	True	NA	62	True	NA	NA	NA	51905017	51855738	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_-_51855968_51860903_51860979_51877281_51877378_51878388_51878516_51880322_51880402_51880678_51880878_51886820_51891898_51896471_51896568_51896851_51896979_51900092_51900295_51904913
H1_mix_00048170	chr19	-	2172	5	NNC	ENSG00000198093.11	novel	3192	5	NA	NA	13	-174	intron_retention	FALSE	canonical	3	12	junction_2	101.092470045993	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTACCCTTCATTATT	46	False	NA	-7	True	NA	NA	NA	51904998	51890227	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_51891898_51896471_51896568_51896859_51896979_51900092_51900295_51904913
H1_mix_00048175	chr19	-	2461	1	FSM	ENSG00000270248.1	ENST00000603942.1	409	1	41	-2093	41	2093	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTAATTTCTGAGACTT	NA	False	NA	NA	False	AATAAA	-11	NA	52110685	52108224	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52108200_52110700
H1_mix_00048176	chr19	-	2563	5	FSM	ENSG00000204611.7	ENST00000330123.9	2563	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	27.9776696670756	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATTCCTACTTACTGATA	185	False	NA	NA	False	NA	NA	NA	52139746	52114789	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52117025_52122359_52122458_52123922_52124050_52130500_52130589_52139731
H1_mix_00048177	chr19	-	612	2	FSM	ENSG00000196267.14	ENST00000599618.1	612	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCTCGGATAGTTCTT	NA	False	NA	NA	False	ATTAAA	-16	NA	52154964	52153863	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52154133_52154621
H1_mix_00048178	chr19	-	4076	5	FSM	ENSG00000196267.14	ENST00000682614.1	4076	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	9.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACTCCAGCCTGGGTGAC	-2	True	NA	NA	False	NA	NA	NA	52171621	52154106	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52157541_52160464_52160592_52168057_52168153_52169647_52169782_52171335
H1_mix_00048179	chr19	-	2685	5	NNC	ENSG00000167766.20	novel	2783	5	NA	NA	1	95	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	31.5950945559592	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAACTTTGGGAGACCGA	2	True	NA	75	True	ATTAAA	-45	NA	52638349	52612281	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_52613593_52613676_52614798_52618935_52619063_52635065_52635154_52638311
H1_mix_00048189	chr19	-	4111	5	NIC	ENSG00000204604.13	novel	4027	5	NA	NA	19	-4	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	61.1938518153581	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTGATTTGGATGAGTT	18	False	NA	-14	True	AATAAA	-14	NA	52857600	52838539	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_52842152_52849086_52849214_52853871_52854127_52854257_52854346_52857571
H1_mix_00048191	chr19	-	6066	3	FSM	ENSG00000182986.15	ENST00000391781.6	6074	3	0	8	0	0	multi-exon	FALSE	canonical	3	37	junction_1	12.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTATTATTCCATCTTCTT	7279	False	NA	-8	True	ATTAAA	-15	NA	52890375	52876179	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52881984_52888126_52888254_52890240
H1_mix_00048192	chr19	-	6020	5	NNC	ENSG00000182986.15	novel	6331	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	7	junction_1	25.4005413328142	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTATTATTCCATCTTCTT	6308	False	NA	-8	True	ATTAAA	-15	NA	52891346	52876179	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_52876762_52876878_52881984_52888126_52888254_52890240_52890329_52891228
H1_mix_00048200	chr19	-	2581	5	FSM	ENSG00000170954.12	ENST00000600120.5	2581	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	12.0286117237194	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTGTCTCAGATTTTAA	23	True	NA	-1	True	ATTAAA	-23	NA	53132875	53107878	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_53109909_53115703_53115925_53116312_53116434_53122661_53122744_53132748
H1_mix_00048209	chr19	-	2400	7	FSM	ENSG00000125505.17	ENST00000431666.6	2471	7	63	8	63	-2	multi-exon	FALSE	canonical	3	27	junction_4	237.473975182311	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGGCATCGTGTCCGTG	NA	False	NA	-11	True	AATAAA	-8	NA	54189819	54173420	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_54174432_54178764_54178942_54180772_54181134_54183520_54183681_54188216_54188347_54188432_54188512_54189337
H1_mix_00048210	chr19	-	3039	2	FSM	ENSG00000125505.17	ENST00000494142.1	3039	2	0	0	0	0	multi-exon	FALSE	canonical	3	526	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCATCGTGTCCGTGCA	8889	False	NA	-9	True	AATAAA	-10	NA	54180790	54173418	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_54174432_54178764
H1_mix_00048217	chr19	-	2980	22	NIC	ENSG00000125503.13	novel	2997	22	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_7	41.2340259732079	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGCTCTGTGTTCCCAG	13	False	NA	-5	True	AATAAA	-17	NA	55117623	55090917	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_55091559_55091649_55091701_55091858_55091910_55092221_55092327_55092441_55092545_55092621_55092663_55092782_55092869_55093015_55093077_55093152_55093234_55094344_55094436_55094660_55094799_55095290_55095359_55095444_55095601_55095866_55095941_55096050_55096179_55096261_55096336_55098783_55098859_55098950_55099096_55103408_55103569_55112466_55112586_55112664_55112796_55117222
H1_mix_00048218	chr19	-	830	4	FSM	ENSG00000125503.13	ENST00000590268.1	830	4	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_2	8.83176086632785	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACCAAGAAGTGCAAGGAT	NA	False	NA	NA	False	NA	NA	NA	55092598	55091207	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55091559_55091649_55091701_55091858_55091910_55092221
H1_mix_00048226	chr19	-	2239	12	FSM	ENSG00000167646.14	ENST00000527223.6	2228	12	0	-11	0	9	multi-exon	FALSE	canonical	1	3	junction_10	15.3170352956417	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCGTCTTTCCTGTCCTAT	-6	True	NA	9	True	AGTAAA	-30	NA	55166650	55158651	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55159450_55159532_55159608_55159898_55160011_55160639_55160776_55161064_55161188_55161292_55161419_55161642_55161826_55162132_55162291_55165369_55165464_55165857_55166064_55166328_55166418_55166511
H1_mix_00048227	chr19	-	2327	12	FSM	ENSG00000167646.14	ENST00000455045.5	2318	12	0	-9	0	9	multi-exon	FALSE	canonical	2	3	junction_9	14.4936577751263	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCGTCTTTCCTGTCCTAT	8353	False	NA	9	True	AGTAAA	-30	NA	55166722	55158651	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55159450_55159532_55159608_55159898_55160014_55160639_55160776_55161064_55161188_55161292_55161419_55161642_55161826_55162132_55162291_55165369_55165464_55165781_55166001_55166328_55166418_55166511
H1_mix_00048235	chr19	-	3954	24	NNC	ENSG00000105063.19	novel	3984	24	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_12	117.831974824813	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCTGGTCAGACCTTAC	12	True	NA	-17	True	AATAAA	-17	NA	55258984	55229778	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_55230532_55230612_55230685_55230773_55230885_55231409_55231492_55231597_55231669_55231801_55231983_55232074_55232212_55236642_55236822_55236912_55236971_55239404_55239503_55239593_55239684_55239825_55239915_55239998_55240115_55240235_55240301_55240944_55241080_55241238_55241392_55241476_55241640_55242165_55242280_55242375_55242489_55245119_55245186_55245264_55245403_55245491_55245679_55246876_55247110_55258434
H1_mix_00048237	chr19	-	1449	7	FSM	ENSG00000133265.11	ENST00000587922.5	1449	7	0	0	0	0	multi-exon	FALSE	canonical	3	601	junction_2	45.7107451505904	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGTCTCTGTGCAGTCCC	-11	True	NA	NA	False	NA	NA	NA	55279856	55262486	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55262683_55265277_55265390_55265885_55265983_55266130_55266287_55274397_55274623_55277641_55277847_55279398
H1_mix_00048246	chr19	-	743	5	FSM	ENSG00000108106.14	ENST00000587845.5	743	5	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	4710.21318519661	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTCCTCCACCGACCCT	464	False	NA	NA	False	NA	NA	NA	55407719	55401578	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55401763_55404060_55404148_55404287_55404479_55406814_55406963_55407586
H1_mix_00048251	chr19	-	3572	3	NIC	ENSG00000179943.8	novel	2645	3	NA	NA	52	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	35	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATGCCTCATTTTCTGA	5789	False	NA	-7	True	AATAAA	-17	NA	55599465	55591375	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_55593647_55597571_55597902_55598494
H1_mix_00048260	chr19	-	757	5	FSM	ENSG00000204514.11	ENST00000597348.5	757	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	68.8235969708065	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCAGTGTGTGTGGTCA	-14	True	NA	-6	True	AATAAA	-31	NA	57889037	57864757	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_57864924_57868457_57868580_57875155_57875227_57876915_57877043_57888766
H1_mix_00048262	chr19	-	999	1	Genic_Genomic	ENSG00000173480.11	novel	NA	NA	NA	NA	5410	15	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATCTAATGTTTGTTATT	9842	False	NA	14	True	NA	NA	NA	57906757	57905758	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr19_-_57905800_57906800
H1_mix_00048266	chr19	-	3610	6	FSM	ENSG00000166704.13	ENST00000550599.6	3606	6	0	-4	0	4	multi-exon	FALSE	canonical	3	7	junction_3	42.2781267323896	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTACCTGGTTTCTCTGTCT	-20	True	NA	-17	True	AATAAA	-29	NA	58002819	57977071	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_57980280_57988206_57988303_57988594_57988722_58000682_58000740_58001288_58001371_58002779
H1_mix_00048267	chr19	-	4229	7	FSM	ENSG00000166704.13	ENST00000341164.9	4225	7	0	-4	0	4	multi-exon	FALSE	canonical	3	22	junction_6	30.3150127824482	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTACCTGGTTTCTCTGTCT	NA	False	NA	-17	True	AATAAA	-29	NA	58003349	57977071	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_57980280_57988206_57988303_57988594_57988722_57999807_57999897_58000682_58000740_58001288_58001371_58002779
H1_mix_00048270	chr19	-	2482	6	NIC	ENSG00000121413.13	novel	2779	7	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	70.55097447945	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGATCTTTTCATTGATTG	34	False	NA	-12	True	ACTAAA	-18	NA	58098201	58083838	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_58085380_58086173_58086267_58087315_58087405_58088687_58088838_58089864_58090387_58098114
H1_mix_00048277	chr19	-	1894	2	NNC	ENSG00000232098.3	novel	462	2	NA	NA	869	-1	intron_retention	TRUE	canonical	3	23	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAATCTGTTCCTCT	2172	False	NA	NA	False	AATAAA	-12	NA	58406308	58404238	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_58405281_58405456
H1_mix_00048280	chr19	-	478	2	FSM	ENSG00000083807.10	ENST00000599700.1	474	2	0	-4	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTATGTCTGCGTGGAT	-4	True	NA	-5	True	AATAAA	-20	NA	58499241	58498332	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_58498692_58499122
H1_mix_00048282	chr19	-	766	4	ISM	ENSG00000130724.10	ENST00000600006.6	1014	5	999	0	541	0	3prime_fragment	FALSE	canonical	3	962	junction_3	35.3490531069158	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCAGGCCCATGTGACT	9254	False	NA	-16	True	AATAAA	-16	NA	58554097	58551565	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_58551968_58552054_58552186_58552258_58552439_58554044
H1_mix_00048287	chr19	+	588	1	Intergenic	novelGene_608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGGTCTCCGCGTGAT	981	False	NA	NA	False	AATAAA	-18	NA	633745	634333	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_633700_634300
H1_mix_00048288	chr19	+	223	1	Intergenic	novelGene_611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGGGTGTCAGACCACGC	NA	False	NA	NA	False	NA	NA	NA	5549192	5549415	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_5549200_5549400
H1_mix_00048289	chr19	+	203	1	Intergenic	novelGene_614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	182	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGCAACACTTCAACACTA	1204	False	NA	NA	False	NA	NA	NA	5552509	5552712	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_5552500_5552700
H1_mix_00048290	chr19	+	989	1	Intergenic	novelGene_620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGTTGTAATCACATTT	NA	False	NA	8	True	AATAAA	-16	NA	16683612	16684601	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_16683600_16684600
H1_mix_00048291	chr19	+	882	1	Intergenic	novelGene_628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCTAATCAGATATCCTG	4643	False	NA	NA	False	AATAAA	-41	NA	20159595	20160477	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_20159600_20160500
H1_mix_00048292	chr19	+	3268	1	Antisense	novelGene_ENSG00000288815.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCAGTGCAATGGTGCCC	NA	False	NA	NA	False	NA	NA	NA	20633770	20637038	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr19_+_20633800_20637000
H1_mix_00048293	chr19	+	541	1	Intergenic	novelGene_634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	215	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATGTCTGACCTCTCAA	2509	False	NA	NA	False	CATAAA	-22	NA	22571173	22571714	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_22571200_22571700
H1_mix_00048296	chr19	+	404	1	Intergenic	novelGene_650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTCCCAAGGCAGGATGA	1598	False	NA	13	True	AATAAA	-27	NA	48924298	48924702	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_48924300_48924700
H1_mix_00048297	chr19	+	2899	1	Intergenic	novelGene_651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCAGTTGCTGAAACAGT	NA	False	NA	NA	False	NA	NA	NA	50316115	50319014	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_50316100_50319000
H1_mix_00048301	chr19	+	806	1	FSM	ENSG00000282798.1	ENST00000631744.1	806	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGACAGACAGTAACTAGT	NA	False	NA	NA	False	NA	NA	NA	69166	69972	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_69200_70000
H1_mix_00048302	chr19	+	927	5	FSM	ENSG00000197540.8	ENST00000264553.6	924	5	-13	10	6	-10	multi-exon	TRUE	canonical	0	0	junction_2	0.82915619758885	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGCTCAGAGCCCGCCTGA	-13	True	NA	NA	False	AATAAA	-13	NA	544039	549912	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_544127_547279_547437_548541_548678_548921_549186_549629
H1_mix_00048303	chr19	+	1605	7	FSM	ENSG00000172270.22	ENST00000346916.9	1605	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	3177.90889055471	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTCCTGGCTCCTGTCT	8	True	NA	24	True	AATAAA	-24	NA	571309	583493	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_571580_580378_580462_580645_580783_581314_581592_582305_582331_582513_582583_582749
H1_mix_00048305	chr19	+	1352	6	FSM	ENSG00000172270.22	ENST00000618006.4	1329	6	-23	0	0	0	multi-exon	FALSE	canonical	1	15	junction_1	3407.47575780078	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCACCCTCTCCTGGCTC	-1	True	NA	18	True	AATAAA	-18	NA	572595	583487	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_572702_580645_580783_581314_581592_582305_582331_582513_582583_582749
H1_mix_00048306	chr19	+	3408	8	FSM	ENSG00000099822.3	ENST00000251287.3	3420	8	12	0	12	0	multi-exon	TRUE	canonical	0	0	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCCGCGTGTGATTGC	10	False	NA	6	True	AATAAA	-19	NA	589892	617159	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_590578_603543_603968_605060_605223_607963_608183_610258_610406_613247_613489_613851_614017_615794
H1_mix_00048307	chr19	+	3185	15	FSM	ENSG00000011304.22	ENST00000394601.8	3185	15	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_8	469.833665747132	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCGTTCCGCCTTCGTTG	1	True	NA	25	True	AATAAA	-15	NA	797451	812312	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_797506_799412_799444_803560_803637_804035_804209_804291_804439_804531_804703_804828_804940_805012_805188_805512_805570_806407_806557_807868_807903_808359_808453_808545_808763_810542_810621_810693
H1_mix_00048308	chr19	+	3133	13	NIC	ENSG00000011304.22	novel	3206	15	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_9	646.306085036769	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCGTTCCGCCTTCGTTG	9	False	NA	25	True	AATAAA	-15	NA	797459	812312	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_797506_803560_803637_804035_804209_804291_804439_804531_804703_804828_804940_805012_805188_805491_805570_806407_806557_808359_808453_808545_808763_810542_810621_810693
H1_mix_00048309	chr19	+	3281	9	FSM	ENSG00000116032.5	ENST00000234389.3	3281	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1.80277563773199	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCATTCCTCCCCGAGTGAC	32	False	NA	23	True	ATTAAA	-23	NA	1000418	1009732	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1000864_1003129_1003723_1004520_1005554_1007627_1007774_1007855_1007972_1008139_1008292_1008617_1008783_1008856_1008928_1009172
H1_mix_00048310	chr19	+	6769	45	NIC	ENSG00000064687.13	novel	6815	47	NA	NA	20	0	intron_retention	FALSE	canonical	3	28	junction_34	19.3836324410976	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGTGCATGTGTGTCCTT	0	True	NA	25	True	AATAAA	-33	NA	1041224	1065572	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_1041428_1041509_1041604_1041830_1041973_1042063_1042177_1042314_1042398_1042745_1042827_1043040_1043252_1043333_1043474_1043724_1043842_1044576_1044745_1045001_1045232_1046229_1046407_1046801_1047025_1047156_1047379_1047452_1047655_1048894_1049006_1049265_1049438_1050920_1051053_1051154_1051295_1051448_1051587_1051941_1052127_1052213_1052287_1053328_1053532_1053787_1053837_1054005_1054111_1054192_1054342_1054569_1054695_1054779_1054879_1055096_1055352_1055906_1055940_1056065_1056244_1056329_1056500_1056906_1057085_1057313_1057430_1057968_1058060_1058145_1058270_1058617_1058748_1058819_1058941_1059022_1059086_1061781_1061889_1062171_1062314_1063543_1063679_1063759_1063864_1064160_1064254_1064930
H1_mix_00048312	chr19	+	3373	8	FSM	ENSG00000118046.17	ENST00000589152.5	3365	8	-8	0	0	0	multi-exon	FALSE	canonical	3	529	junction_1	29.2121026079177	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCCGCTTTGGTTTTTTG	505	False	NA	-4	True	NA	NA	NA	1206815	1228012	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1207204_1218416_1218501_1219323_1219414_1220372_1220506_1220580_1220718_1221212_1222007_1222984_1223173_1226453
H1_mix_00048313	chr19	+	640	5	FSM	ENSG00000099624.8	ENST00000591660.5	637	5	-3	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	657.201643333308	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCCAGCCCCCGCCCCAT	31	True	NA	-17	True	NA	NA	NA	1241816	1244786	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1241992_1242455_1242610_1244096_1244186_1244314_1244441_1244690
H1_mix_00048314	chr19	+	523	3	FSM	ENSG00000167470.14	ENST00000591302.1	523	3	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	14.5	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTGCAGCTCGCGGCCC	259	False	NA	NA	False	NA	NA	NA	1251260	1254237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1251650_1251838_1251902_1254166
H1_mix_00048315	chr19	+	1459	7	FSM	ENSG00000099622.14	ENST00000588090.5	1459	7	0	0	0	0	multi-exon	TRUE	canonical	3	5	junction_1	436.332983193137	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCTCTGACAATTCCCT	383	False	NA	NA	False	ATTAAA	-18	NA	1267087	1273172	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1267293_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1272426
H1_mix_00048316	chr19	+	2867	15	NIC	ENSG00000160953.17	novel	2793	14	NA	NA	8	-7	combination_of_known_junctions	FALSE	canonical	3	45	junction_5	157.959646745617	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGGAAACAGCCTTCGT	-4	True	NA	NA	False	NA	NA	NA	1354979	1377087	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_1355021_1356323_1356450_1357008_1357095_1358393_1358465_1358587_1358701_1360135_1361033_1362249_1362352_1364508_1364580_1366304_1366382_1367159_1367221_1369264_1369341_1369595_1369647_1370641_1371079_1373071_1373161_1376518
H1_mix_00048318	chr19	+	1036	9	NIC	ENSG00000115286.21	novel	1060	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	463.702608764497	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCCAGTGTGGTGTGTG	NA	False	NA	25	True	AATAAA	-18	NA	1383526	1395581	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_1383609_1383707_1383943_1387810_1387848_1388524_1388594_1388832_1388939_1390870_1391051_1391118_1391166_1393241_1393331_1395390
H1_mix_00048320	chr19	+	2822	7	FSM	ENSG00000115286.21	ENST00000313408.11	2818	7	-4	0	0	0	multi-exon	FALSE	canonical	3	964	junction_1	166.295920976232	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCCAGTGTGGTGTGTG	-5	True	NA	25	True	AATAAA	-18	NA	1383899	1395581	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1383943_1387810_1387848_1388524_1388594_1388832_1388939_1390870_1391051_1391118_1391166_1393241
H1_mix_00048321	chr19	+	3743	1	FSM	ENSG00000115286.21	ENST00000591358.1	3743	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCAGTGTGGTGTGTGGGT	3596	False	NA	28	True	AATAAA	-21	NA	1391841	1395584	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1391800_1395600
H1_mix_00048322	chr19	+	562	4	FSM	ENSG00000115268.10	ENST00000586686.6	562	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	7400.50450232205	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	-13	True	NA	29	True	AATAAA	-17	NA	1438384	1440494	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1438429_1438806_1438893_1439967_1440254_1440348
H1_mix_00048323	chr19	+	588	6	FSM	ENSG00000227500.10	ENST00000460767.5	569	6	-19	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	134.930500629028	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGATTGGCTTCTCCGGCTG	-18	True	NA	NA	False	NA	NA	NA	1905371	1918961	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1905440_1914978_1915027_1915431_1915545_1917693_1917823_1918126_1918284_1918888
H1_mix_00048325	chr19	+	570	4	FSM	ENSG00000227500.10	ENST00000590266.5	570	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	138.811622952355	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCCTGGTGGATCGG	4813	False	NA	NA	False	NA	NA	NA	1913089	1918161	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_1913448_1914978_1915027_1917693_1917823_1918126
H1_mix_00048326	chr19	+	5625	29	NIC	ENSG00000104885.19	novel	5469	28	NA	NA	-79	-868	combination_of_known_junctions	TRUE	canonical	3	19	junction_3	17.2949724321426	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTGTGGACCAACTCGCGC	NA	False	NA	NA	False	NA	NA	NA	2163853	2229826	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_2164266_2180712_2180757_2185854_2185930_2189731_2189796_2191011_2191241_2193688_2193784_2194514_2194578_2199883_2199940_2202699_2202780_2206728_2206798_2207573_2207681_2208934_2208977_2210399_2210511_2210620_2210856_2211098_2211213_2211750_2211843_2213538_2213641_2213848_2213987_2214470_2214597_2216280_2216766_2216954_2217091_2217771_2217919_2220107_2220223_2221975_2222560_2223280_2223487_2225387_2225453_2226182_2227128_2227736_2228383_2229784
H1_mix_00048327	chr19	+	4572	26	NIC	ENSG00000104885.19	novel	5469	28	NA	NA	-12	-1037	combination_of_known_splicesites	FALSE	canonical	3	7	junction_4	18.4483712018162	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCGTGTGTCTTGGGTTC	24	False	NA	NA	False	NA	NA	NA	2164172	2227310	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_2164266_2180712_2180757_2185854_2185930_2189731_2189796_2193688_2193784_2194514_2194578_2199883_2199940_2202699_2202780_2206728_2206798_2207573_2207681_2208934_2208977_2210399_2210511_2210620_2210856_2211098_2211213_2211750_2211843_2213538_2213641_2213848_2213987_2214470_2214597_2216280_2216766_2216954_2217091_2217771_2217919_2220107_2220223_2221975_2222560_2223280_2223487_2225387_2225453_2226182
H1_mix_00048328	chr19	+	5473	1	NIC	ENSG00000104885.19	novel	7652	28	NA	NA	4576	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGTGAATGGCAGCCT	2624	False	NA	28	True	AATAAA	-20	NA	2227105	2232578	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_2227100_2232600
H1_mix_00048330	chr19	+	2512	15	NIC	ENSG00000005206.17	novel	3691	15	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_5	68.2102467016653	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGCTGGTGCCACCTGG	11	True	NA	30	True	AATAAA	-19	NA	2328697	2353933	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_2328776_2334601_2334722_2337442_2337626_2338751_2338842_2339068_2339209_2339826_2339967_2340075_2340173_2340897_2341015_2343210_2343293_2343964_2344040_2344361_2344425_2344552_2344653_2345252_2345331_2351433_2351595_2352945
H1_mix_00048332	chr19	+	2505	6	FSM	ENSG00000172006.12	ENST00000590116.5	2486	6	-19	0	-19	0	multi-exon	FALSE	canonical	0	0	junction_2	22.9660619175339	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATTAT	25	False	NA	NA	False	NA	NA	NA	2819899	2835471	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_2820125_2823039_2823113_2826249_2826347_2827616_2827744_2832302_2832495_2833680
H1_mix_00048336	chr19	+	1186	7	ISM	ENSG00000161082.13	ENST00000541430.6	4268	12	31	13780	31	103	intron_retention	FALSE	canonical	3	14	junction_5	3.78593889720018	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAACAAGTATGAGTCCC	3	True	NA	NA	False	AATAAA	-11	NA	3224734	3282556	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_3224999_3250984_3251068_3273871_3273924_3275855_3275985_3278030_3278111_3281198_3281346_3282125
H1_mix_00048337	chr19	+	977	4	FSM	ENSG00000141905.19	ENST00000589537.1	977	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCACCTCTCCCCGGGCCC	47	False	NA	NA	False	NA	NA	NA	3435045	3463255	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_3435208_3449013_3449140_3452481_3452667_3462751
H1_mix_00048338	chr19	+	3045	14	NIC	ENSG00000105325.15	novel	5178	14	NA	NA	1	191	combination_of_known_junctions	FALSE	canonical	3	15	junction_13	62.5922278102363	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTTTGTGTTTTTGTT	3	True	NA	13	True	NA	NA	NA	3506311	3536193	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_3506475_3522955_3523059_3525867_3525994_3526119_3526184_3526258_3526387_3526979_3527063_3527630_3527815_3530791_3530858_3531713_3531817_3531910_3532096_3532416_3532651_3533293_3533399_3534420_3534523_3534794
H1_mix_00048340	chr19	+	1086	8	NNC	ENSG00000077009.14	novel	1160	8	NA	NA	0	0	intron_retention	FALSE	canonical	2	14	junction_1	339.289593962781	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTTGGTGTCTACCGT	6	True	NA	9	True	AGTAAA	-17	NA	3933102	3942413	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_3933175_3933490_3933698_3936574_3936666_3937239_3937289_3938602_3938760_3939899_3939972_3941070_3941178_3942082
H1_mix_00048341	chr19	+	1029	6	NIC	ENSG00000077009.14	novel	1160	8	NA	NA	-203	0	intron_retention	FALSE	canonical	3	106	junction_4	362.87055543265	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTTGGTGTCTACCGT	307	False	NA	9	True	AGTAAA	-17	NA	3933403	3942413	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_3933698_3936574_3936666_3937239_3937289_3938602_3938760_3941070_3941178_3942082
H1_mix_00048342	chr19	+	3786	21	ISM	ENSG00000089847.13	ENST00000600132.5	4026	22	3036	0	-31	0	3prime_fragment	TRUE	canonical	0	0	junction_1	27.2260904281169	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAACGCGTGCCGTCTCGTT	112	False	NA	23	True	AATAAA	-19	NA	4186389	4224814	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_4186462_4199682_4199770_4199874_4200006_4200082_4200172_4202025_4202091_4202868_4202927_4207241_4207313_4207500_4207608_4207780_4207969_4208763_4208802_4210057_4210139_4210264_4210373_4212474_4212514_4212599_4212699_4215977_4216051_4216283_4216403_4216549_4218164_4219590_4219759_4222669_4222796_4224126_4224193_4224427
H1_mix_00048343	chr19	+	3377	16	NIC	ENSG00000089847.13	novel	3711	20	NA	NA	29	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	26.7302575121652	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAACGCGTGCCGTCTCGTT	36	False	NA	23	True	AATAAA	-19	NA	4198439	4224814	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_4198533_4207241_4207313_4207500_4207608_4207780_4207969_4208763_4208802_4210057_4210139_4210264_4210373_4212474_4212514_4212599_4212699_4215977_4216051_4216283_4216403_4216549_4218164_4219590_4219759_4222669_4222796_4224126_4224193_4224427
H1_mix_00048344	chr19	+	1379	10	ISM	ENSG00000008382.16	ENST00000359935.8	1475	11	200	3	43	0	3prime_fragment	FALSE	canonical	3	18	junction_5	42.4825309050528	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCCACGCTGGTCTCCC	54	False	NA	6	True	AATAAA	-16	NA	4343753	4360078	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_4343995_4345744_4345982_4352896_4353030_4354044_4354130_4354323_4354421_4357252_4357422_4357514_4357586_4358082_4358173_4359162_4359256_4359915
H1_mix_00048345	chr19	+	746	2	FSM	ENSG00000267980.1	ENST00000594444.1	746	2	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	0	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCGGTCTCGAACTCCTGA	6420	False	NA	NA	False	AATAGA	-25	NA	4363788	4364640	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4364012_4364117
H1_mix_00048346	chr19	+	1615	7	NIC	ENSG00000167670.16	novel	3366	15	NA	NA	0	-34	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	223.127019131854	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGCCCCTGAGGTCCGGA	1	True	NA	NA	False	NA	NA	NA	4402639	4428829	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_4402815_4408902_4409760_4418019_4418077_4422565_4422796_4423334_4423396_4423805_4423875_4428663
H1_mix_00048347	chr19	+	759	3	Antisense	novelGene_ENSG00000167680.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	5	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTTTTGATGGTTTTGT	4902	False	NA	14	True	AATAAA	-28	NA	4580568	4586074	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr19_+_4580773_4585411_4585583_4585690
H1_mix_00048348	chr19	+	3850	1	FSM	ENSG00000141965.5	ENST00000269856.5	9540	1	-23	5713	-23	-5713	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCCTGATGCGTCCTT	-21	True	NA	24	True	ATTAAA	-19	NA	4791710	4795560	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_4791700_4795600
H1_mix_00048350	chr19	+	2457	15	NIC	ENSG00000276043.5	novel	3965	17	NA	NA	18	58	combination_of_known_splicesites	FALSE	canonical	1	6	junction_5	123.72445108352	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTAGTTCTTTGAAAA	18	False	NA	NA	False	NA	NA	NA	4909518	4961019	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_4909656_4910875_4911039_4929221_4929477_4930715_4930877_4932740_4932957_4944131_4944256_4944342_4944451_4945860_4945966_4947104_4947212_4950610_4950774_4950858_4950997_4954349_4954489_4954649_4954823_4956708_4956814_4960656
H1_mix_00048351	chr19	+	5298	21	NIC	ENSG00000127663.15	novel	5604	23	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	58.3981806223447	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGTTCCATGCCCCGGCA	15	False	NA	19	True	ATTAAA	-21	NA	4969127	5153598	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_4969231_5016256_5016340_5032865_5033032_5047475_5047670_5071009_5071060_5077366_5077471_5082366_5082505_5110621_5110819_5119652_5119853_5131075_5131546_5131886_5132008_5133882_5134062_5135338_5135562_5137261_5137339_5137620_5137677_5137961_5138071_5143966_5144153_5144247_5144413_5144782_5144903_5150357_5150451_5151334
H1_mix_00048353	chr19	+	3471	2	FSM	ENSG00000160633.13	ENST00000591991.1	3471	2	0	0	0	0	multi-exon	FALSE	canonical	3	1313	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTTATTTAAAGTGTCAT	NA	False	NA	49	True	AATAAA	-19	NA	5664725	5668471	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_5667887_5668161
H1_mix_00048354	chr19	+	1588	7	FSM	ENSG00000167733.14	ENST00000579562.5	1575	7	-13	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	28.6045839372332	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTTGTTCAAATTCCT	-7	True	NA	17	True	AATAAA	-19	NA	5681023	5688522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_5681272_5684818_5684906_5684988_5685120_5686899_5686992_5687281_5687376_5687502_5687669_5687752
H1_mix_00048355	chr19	+	1589	8	FSM	ENSG00000167733.14	ENST00000616276.4	1580	8	-10	1	-10	0	multi-exon	FALSE	canonical	1	1	junction_1	28.6797944944677	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTTGTTCAAATTCCT	2820	False	NA	17	True	AATAAA	-19	NA	5684022	5688522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_5684122_5684780_5684906_5684988_5685120_5686415_5686528_5686899_5686992_5687281_5687376_5687502_5687669_5687752
H1_mix_00048356	chr19	+	3424	4	ISM	ENSG00000105519.18	ENST00000588776.8	1537	5	-2034	221	-119	113	intron_retention	FALSE	canonical	3	24	junction_1	1.4142135623731	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACAGGGCTGTGGCTGGA	7349	False	NA	NA	False	NA	NA	NA	5912219	5915990	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_5914310_5914384_5914490_5914562_5914741_5914939
H1_mix_00048357	chr19	+	441	2	FSM	ENSG00000125656.11	ENST00000646643.1	441	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTCTGGGACACCCTCCC	-5	True	NA	24	True	ATTAAA	-19	NA	6364567	6368906	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_6364640_6368537
H1_mix_00048358	chr19	+	548	4	FSM	ENSG00000125652.8	ENST00000599849.1	556	4	8	0	8	0	multi-exon	FALSE	canonical	2	10	junction_1	273.45850792315	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGACATTGCAGTGGCTG	735	False	NA	15	True	AATAAA	-22	NA	6373711	6375031	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_6373740_6374202_6374377_6374464_6374590_6374810
H1_mix_00048359	chr19	+	481	1	FSM	ENSG00000268785.1	ENST00000600588.1	727	1	175	71	175	-71	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTTCGTGGAAGGTGGA	197	False	NA	NA	False	AAGAAA	-8	NA	6593503	6593984	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_6593500_6594000
H1_mix_00048363	chr19	+	4457	35	FSM	ENSG00000032444.17	ENST00000450331.7	4457	35	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	89.615480002371	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTCCTGTCGTTTTCGG	16	True	NA	24	True	AATAAA	-16	NA	7534749	7561764	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7534903_7535126_7535203_7535508_7535578_7535932_7536021_7536190_7536274_7536448_7536547_7539917_7540059_7540148_7540309_7540629_7540711_7540922_7541052_7541353_7541435_7541521_7541685_7541983_7542068_7542560_7542671_7542760_7542929_7543006_7543085_7549906_7550113_7550297_7550430_7550516_7550641_7550993_7551108_7551361_7551438_7553871_7554016_7554208_7554273_7554554_7554724_7554892_7555076_7555248_7555368_7555606_7555764_7556452_7556570_7556654_7556725_7557167_7557285_7558849_7559152_7560647_7560765_7561013_7561111_7561207_7561318_7561487
H1_mix_00048364	chr19	+	4377	34	NIC	ENSG00000032444.17	novel	4617	35	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	184	junction_20	56.0481558656592	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTCCTGTCGTTTTCGG	17	True	NA	24	True	AATAAA	-16	NA	7534750	7561764	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_7534903_7535508_7535578_7535932_7536021_7536190_7536274_7536448_7536547_7539917_7540059_7540148_7540309_7540629_7540711_7540922_7541052_7541353_7541435_7541521_7541685_7541983_7542068_7542560_7542671_7542760_7542929_7543006_7543085_7549906_7550113_7550297_7550430_7550516_7550641_7550993_7551108_7551361_7551438_7553874_7554016_7554208_7554273_7554554_7554724_7554892_7555076_7555248_7555368_7555606_7555764_7556452_7556570_7556654_7556725_7557167_7557285_7558849_7559152_7560647_7560765_7561013_7561111_7561207_7561318_7561487
H1_mix_00048365	chr19	+	4331	32	ISM	ENSG00000032444.17	ENST00000450331.7	4457	35	1011	0	44	0	3prime_fragment	FALSE	canonical	3	144	junction_18	58.2728699080945	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTCCTGTCGTTTTCGG	-14	True	NA	24	True	AATAAA	-16	NA	7535760	7561764	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_7536021_7536190_7536274_7536448_7536547_7539917_7540059_7540148_7540309_7540629_7540711_7540922_7541052_7541353_7541435_7541521_7541685_7541983_7542068_7542560_7542671_7542760_7542929_7543006_7543085_7549906_7550113_7550297_7550430_7550516_7550641_7550993_7551108_7551361_7551438_7553871_7554016_7554208_7554273_7554554_7554724_7554892_7555076_7555248_7555368_7555606_7555764_7556452_7556570_7556654_7556725_7557167_7557285_7558849_7559152_7560647_7560765_7561013_7561111_7561207_7561318_7561487
H1_mix_00048368	chr19	+	4090	17	NNC	ENSG00000076826.10	novel	4137	17	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_16	94.8860953657068	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAACCTTGTCCCCCCCT	-2	True	NA	30	True	AATAAA	-16	NA	7595871	7618304	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_7596151_7605225_7605480_7606270_7606394_7606475_7606572_7608125_7608265_7610475_7610616_7610699_7610794_7610876_7610932_7611094_7611169_7611516_7611587_7611737_7613164_7615182_7615323_7615417_7615720_7616522_7616623_7617325_7617439_7617542_7617662_7617738
H1_mix_00048369	chr19	+	4131	18	NIC	ENSG00000076826.10	novel	4179	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_5	80.8466017243806	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAACCTTGTCCCCCCCT	28	True	NA	30	True	AATAAA	-16	NA	7595901	7618304	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_7596151_7605225_7605480_7606270_7606394_7606475_7606572_7606776_7606810_7608125_7608265_7610475_7610616_7610699_7610794_7610876_7610932_7611094_7611169_7611516_7611587_7611686_7613164_7615182_7615323_7615417_7615720_7616522_7616623_7617325_7617439_7617542_7617662_7617751
H1_mix_00048372	chr19	+	811	7	FSM	ENSG00000076944.17	ENST00000599400.1	811	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	201.948563308141	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCCAGAGAAATAAACTCTT	4113	False	NA	-14	True	NA	NA	NA	7643214	7647838	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7643246_7644613_7644753_7645196_7645307_7646171_7646345_7647161_7647248_7647353_7647512_7647724
H1_mix_00048373	chr19	+	477	2	FSM	ENSG00000269228.1	ENST00000597285.1	458	2	-19	0	-19	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAACTGTATGAATTAACAA	17	False	NA	NA	False	NA	NA	NA	7665697	7666476	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7665952_7666253
H1_mix_00048374	chr19	+	4024	18	ISM	ENSG00000142459.9	ENST00000270530.8	3855	19	-26	0	-11	0	intron_retention	FALSE	canonical	3	17	junction_11	14.8820041809867	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGGCCTGCGGGCTGG	-4	True	NA	22	True	AATAAA	-18	NA	7830206	7864976	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_7830382_7846495_7846680_7847731_7847922_7848920_7849146_7849255_7849331_7849996_7850123_7851433_7851578_7851680_7851771_7853085_7853184_7853272_7853334_7856014_7856069_7858190_7858332_7860560_7860690_7861877_7862019_7862121_7862278_7862387_7862535_7862971_7863068_7863184
H1_mix_00048375	chr19	+	5035	2	FSM	ENSG00000171017.11	ENST00000599367.1	881	2	404	-4558	404	1470	multi-exon	FALSE	canonical	3	16	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGTGGAGACCAGGGATCG	6993	False	NA	NA	False	NA	NA	NA	7895537	7903491	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_7895742_7898660
H1_mix_00048376	chr19	+	879	3	Fusion	ENSG00000289255.1_ENSG00000267939.1	novel	421	2	NA	NA	22	0	multi-exon	FALSE	canonical	1	3	junction_2	1	40	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACTGTGTATGTTATGAG	17	False	NA	15	True	AATAAA	-19	NA	8005833	8016025	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_+_8005964_8008611_8008877_8015541
H1_mix_00048377	chr19	+	977	6	FSM	ENSG00000131142.14	ENST00000315626.6	991	6	14	0	12	0	multi-exon	FALSE	canonical	0	0	junction_1	0.979795897113271	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCCTGTTACATTTCT	13	False	NA	NA	False	AATAAA	-22	NA	8052773	8062650	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_8052823_8052999_8053123_8056151_8056270_8056365_8056500_8057800_8057921_8062217
H1_mix_00048378	chr19	+	1337	2	FSM	ENSG00000090661.12	ENST00000599275.1	710	2	-630	3	0	0	multi-exon	FALSE	canonical	3	505	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTCTGCCTGAGAACT	NA	False	NA	12	True	ATTAAA	-13	NA	8260996	8262418	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_8261845_8261929
H1_mix_00048379	chr19	+	1819	6	NNC	ENSG00000185236.12	novel	1590	5	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	580.081235690313	170	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCGCTGCGCCTCTGTC	98	False	NA	38	True	NA	NA	NA	8389979	8404434	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_8390057_8390207_8390457_8399862_8400059_8402085_8402280_8402484_8402566_8403412
H1_mix_00048380	chr19	+	4186	7	FSM	ENSG00000130803.15	ENST00000591278.5	4186	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	68.079406251491	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATATTTCATTGTTTTTC	-5	True	NA	12	True	AATAAA	-25	NA	9140414	9163415	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_9140593_9155924_9156042_9156611_9156749_9157267_9157395_9157833_9158076_9158825_9158909_9160113
H1_mix_00048381	chr19	+	562	2	Antisense	novelGene_ENSG00000197961.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	74	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACACACACATAATAAGAAAG	96	False	NA	NA	False	ACTAAA	-17	NA	9562227	9563166	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr19_+_9562442_9562818
H1_mix_00048382	chr19	+	2405	4	FSM	ENSG00000267106.9	ENST00000588765.5	2411	4	6	0	-3	0	multi-exon	FALSE	canonical	1	1	junction_1	63.6605581711837	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGAGTGAGACTCCATCT	3	True	NA	NA	False	NA	NA	NA	9621508	9635446	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_9621646_9627715_9627807_9632227_9632418_9633459
H1_mix_00048383	chr19	+	1633	9	FSM	ENSG00000105364.14	ENST00000393733.6	1620	9	-13	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	353.636090317434	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTATTTTTGAATCAA	-21	True	NA	-12	True	TTTAAA	-3	NA	10252213	10260025	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10252311_10252396_10252464_10252550_10252702_10254588_10254641_10256707_10256826_10258221_10258329_10258412_10258523_10258608_10258686_10259171
H1_mix_00048386	chr19	+	5597	19	NIC	ENSG00000129351.17	novel	3219	19	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	104	junction_17	472.862001245841	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTGTTTCATTCACTCA	-13	True	NA	15	True	AATAAA	-16	NA	10655024	10692398	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_10655124_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683136_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10688549_10688679_10689178
H1_mix_00048389	chr19	+	1943	5	FSM	ENSG00000079805.19	ENST00000593203.1	2507	5	564	0	564	0	multi-exon	FALSE	canonical	3	28	junction_4	374.482976916174	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATGGTGGCTCATGCCTA	NA	False	NA	9	True	AATAAA	-13	NA	10823787	10833484	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_10823900_10825056_10825222_10829035_10829269_10830126_10830379_10832303
H1_mix_00048390	chr19	+	5340	34	NNC	ENSG00000127616.20	novel	5777	34	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	274.350924460017	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCTTAAAGAGAGAGAGAG	22	True	NA	105	True	NA	NA	NA	10960931	11062028	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_10961175_10984120_10984374_10985272_10985406_10986188_10986594_10986904_10987004_10987665_10987925_10989316_10989444_10991149_10991324_10994827_10995002_10996212_10996381_10996493_10996545_11003028_11003160_11003339_11003398_11007901_11008024_11010380_11010532_11012948_11013113_11018956_11019024_11019590_11019702_11021724_11021968_11023517_11023632_11024330_11024439_11025421_11025509_11026299_11026347_11027783_11027951_11030729_11030894_11033289_11033518_11034122_11034201_11034913_11035132_11041296_11041561_11058254_11058364_11058787_11058890_11059752_11059886_11060044_11060188_11061783
H1_mix_00048393	chr19	+	896	4	FSM	ENSG00000127616.20	ENST00000592158.2	911	4	0	15	0	-15	multi-exon	FALSE	canonical	3	680	junction_2	329.145695534499	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATAGACTCAGAGTCCTC	NA	False	NA	NA	False	AATAAA	-17	NA	11035021	11059212	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11035133_11041306_11041561_11058257_11058364_11058787
H1_mix_00048394	chr19	+	866	1	NIC	ENSG00000127616.20	novel	1968	8	NA	NA	4226	-570	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAGATTATAATTTATTT	NA	False	NA	NA	False	NA	NA	NA	11064686	11065552	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_11064700_11065600
H1_mix_00048395	chr19	+	5245	16	FSM	ENSG00000130164.14	ENST00000545707.5	2429	16	-606	-2210	-605	0	multi-exon	FALSE	canonical	1	3	junction_12	98.090434463985	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTCTAAACTCGATGCAC	NA	False	NA	19	True	ATTAAA	-18	NA	11088856	11133820	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11089616_11100222_11100346_11102663_11102787_11106564_11106688_11107391_11107515_11110651_11110772_11111513_11111640_11113277_11113450_11113534_11113763_11116093_11116213_11116858_11116999_11120091_11120234_11123173_11123345_11128007_11128086_11129512_11129671_11131280
H1_mix_00048396	chr19	+	2086	19	NNC	ENSG00000130175.10	novel	2096	18	NA	NA	-4304	0	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_1	293.009669920067	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAATAAATGTGATCCCC	NA	False	NA	0	True	NA	NA	NA	11430979	11450940	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_11431032_11435647_11435707_11436040_11436197_11436388_11436506_11437875_11437972_11438066_11438125_11441239_11441358_11442385_11442516_11445388_11445474_11446271_11446351_11447073_11447161_11447438_11447598_11447692_11447790_11448221_11448292_11448539_11448630_11448913_11448989_11449075_11449176_11449265_11449429_11450645
H1_mix_00048398	chr19	+	2299	8	ISM	ENSG00000130175.10	ENST00000589838.5	1898	17	11010	0	7	0	intron_retention	FALSE	canonical	3	536	junction_2	204.811311868724	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAATAAATGTGATCCCC	38	False	NA	0	True	NA	NA	NA	11447127	11450940	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_11447161_11447438_11447598_11447692_11447790_11448221_11448292_11448539_11448630_11448913_11448989_11449075_11449176_11449265
H1_mix_00048399	chr19	+	1613	8	FSM	ENSG00000130175.10	ENST00000586486.1	1613	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	455.396216810937	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTCTGTGTCTGCCTCGC	475	False	NA	28	True	AATAAA	-19	NA	11447564	11450968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11447619_11447722_11447790_11448221_11448292_11448539_11448630_11448913_11448989_11449075_11449176_11449265_11449883_11450428
H1_mix_00048401	chr19	+	488	4	FSM	ENSG00000130176.8	ENST00000586577.1	685	4	0	197	0	-197	multi-exon	FALSE	canonical	3	96	junction_2	17.1075032271418	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACCACACCACCCTTCGC	618	False	NA	NA	False	NA	NA	NA	11546707	11549527	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11546742_11546831_11546970_11547796_11547908_11549322
H1_mix_00048402	chr19	+	4232	4	FSM	ENSG00000197044.11	ENST00000357901.5	4448	4	158	58	66	-58	multi-exon	FALSE	canonical	1	2	junction_2	0.471404520791032	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATATATGTAAAATATGT	38	False	NA	-41	True	AAGAAA	-16	NA	11767157	11784020	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11767197_11777610_11777738_11778329_11778394_11780018
H1_mix_00048404	chr19	+	673	4	FSM	ENSG00000171295.13	ENST00000427505.5	920	4	-58	305	-1	0	multi-exon	FALSE	canonical	1	3	junction_1	3.55902608401044	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAAACCCAATGCTTGT	8	True	NA	NA	False	AAGAAA	-13	NA	11814285	11831678	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11814451_11830273_11830410_11830616_11830678_11831367
H1_mix_00048405	chr19	+	569	4	FSM	ENSG00000198429.10	ENST00000445911.5	569	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	4.10960933531265	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAAAAGCCTTCAGATAT	16	True	NA	NA	False	NA	NA	NA	11887817	11904902	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11887987_11903614_11903700_11903904_11903966_11904648
H1_mix_00048406	chr19	+	2770	3	NIC	ENSG00000196757.8	novel	2843	4	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	11	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAAGCTTATAATGTTAC	10	False	NA	23	True	AATAAA	-25	NA	11925118	11950763	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_11925274_11947180_11947308_11948275
H1_mix_00048407	chr19	+	2801	3	FSM	ENSG00000197054.12	ENST00000592625.5	582	3	12	-2231	-5	9	multi-exon	FALSE	canonical	1	3	junction_2	3.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGCCTTTTCTTTCTCTG	1	True	NA	NA	False	AATAAA	-28	NA	11965048	11980626	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11965212_11977037_11977165_11978115
H1_mix_00048408	chr19	+	387	2	FSM	ENSG00000219665.8	ENST00000588047.1	529	2	0	142	0	-142	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTGACAATAGAAGCCC	5	True	NA	NA	False	NA	NA	NA	11987655	12035772	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_11987824_12035553
H1_mix_00048409	chr19	+	6568	4	FSM	ENSG00000223547.10	ENST00000439326.8	6588	4	0	20	0	-20	multi-exon	FALSE	canonical	1	2	junction_3	4.78423336480244	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTATTAGATCAAGTTCA	1	True	NA	-7	True	ATTAAA	-2	NA	12064730	12081545	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12064877_12074030_12074158_12074360_12074422_12075311
H1_mix_00048410	chr19	+	2971	4	FSM	ENSG00000214189.9	ENST00000397755.2	3246	4	0	275	0	-275	multi-exon	FALSE	canonical	1	1	junction_3	7.31816613336672	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCAAGTTGGCATCGCTG	34	False	NA	NA	False	ATTAAA	-31	NA	12092335	12100513	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12092471_12093835_12093896_12094065_12094185_12097856
H1_mix_00048412	chr19	+	3735	5	FSM	ENSG00000196646.12	ENST00000425827.5	474	5	11	-3272	5	3	multi-exon	FALSE	canonical	0	0	junction_2	17.9652442232217	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTCATGGATTGTGTCA	-11	True	NA	6	True	AATAAA	-17	NA	12163074	12189874	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12163207_12169281_12169392_12185784_12185912_12186113_12186175_12186569
H1_mix_00048413	chr19	+	1415	11	FSM	ENSG00000123154.12	ENST00000548381.5	1425	11	10	0	-6	0	multi-exon	FALSE	canonical	3	10	junction_4	62.1147325519478	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGCTCAGTCCTCGTTCT	-3	True	NA	14	True	AATAAA	-33	NA	12666823	12675831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12666993_12668507_12668628_12669754_12669894_12669976_12670081_12670179_12670286_12670562_12670612_12670694_12670822_12672846_12672915_12673007_12673117_12673201_12673317_12675522
H1_mix_00048414	chr19	+	5198	28	NNC	ENSG00000105613.10	novel	4853	26	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	2	5	junction_12	18.6446813504865	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTGGGGCTCACTCCT	16	True	NA	27	True	AATAAA	-20	NA	12833950	12874952	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_12834007_12838268_12838656_12840445_12840535_12840990_12841067_12843528_12843608_12847289_12847451_12847611_12847688_12847847_12848058_12851933_12852036_12852114_12852248_12852327_12852396_12855724_12855768_12858361_12858442_12858530_12858740_12864808_12864948_12865045_12865179_12865315_12865482_12865716_12865819_12865979_12866103_12866652_12866763_12867473_12867653_12867729_12867978_12868642_12868850_12869065_12869296_12870823_12870947_12871035_12871173_12873323_12873512_12873608
H1_mix_00048415	chr19	+	1624	12	ISM	ENSG00000105613.10	ENST00000251472.9	4853	26	-22	16035	20	-4	5prime_fragment	FALSE	canonical	3	37	junction_10	9.23521825396385	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTGGTTTATTTGTTTT	-4	True	NA	19	True	NA	NA	NA	12838492	12858917	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_12838656_12840445_12840535_12840990_12841067_12843528_12843608_12847289_12847451_12847611_12847688_12847847_12848058_12851933_12852036_12852114_12852248_12852327_12852396_12858361_12858442_12858530
H1_mix_00048416	chr19	+	500	5	FSM	ENSG00000105607.13	ENST00000590445.5	496	5	-4	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	195.039098644349	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTTCGGAGATGGGGGA	-10	True	NA	NA	False	NA	NA	NA	12891159	12892129	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12891203_12891270_12891396_12891486_12891661_12891830_12891975_12892115
H1_mix_00048417	chr19	+	1142	2	FSM	ENSG00000105607.13	ENST00000588242.2	1006	2	0	-136	0	136	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGGTGGGTGGATTACT	5448	False	NA	NA	False	NA	NA	NA	12899570	12900806	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_12900140_12900233
H1_mix_00048418	chr19	+	2017	11	NNC	ENSG00000104957.14	novel	1922	11	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	39.0486875579705	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGTCTTGGGTTGTTA	21	True	NA	14	True	ATTAAA	-14	NA	13731787	13763289	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_13732081_13732174_13732286_13751607_13751812_13754288_13754343_13756196_13756280_13757417_13757474_13757785_13757847_13758867_13759011_13759099_13759273_13762298_13762438_13762589
H1_mix_00048420	chr19	+	3380	28	NIC	ENSG00000132024.18	novel	3581	29	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_11	49.0346312490305	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCAGCTCTGTCCTGTCTG	-12	True	NA	8	True	AATAAA	-20	NA	13906267	13930879	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_13906502_13909822_13909959_13912322_13912439_13912527_13912594_13913167_13913303_13913403_13913639_13918069_13918195_13918503_13918577_13918745_13918818_13918911_13919043_13919129_13919203_13920556_13920669_13920749_13920923_13923332_13923456_13923547_13923607_13923694_13923812_13926516_13926591_13926666_13926726_13926820_13926873_13926977_13927078_13927174_13927266_13927892_13928031_13928123_13928189_13929378_13929443_13929533_13929661_13930077_13930155_13930241_13930290_13930374
H1_mix_00048423	chr19	+	3032	14	NNC	ENSG00000104998.4	novel	2950	14	NA	NA	-69	-2	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_3	40.1178736597822	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTAGCTTTGAGGTCTT	3526	False	NA	6	True	AATAAA	-19	NA	14031692	14053216	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_14031973_14032385_14032504_14039507_14039666_14039737_14039911_14042452_14042613_14042715_14042790_14046153_14046338_14046429_14046619_14048980_14049083_14049155_14049315_14050757_14050884_14051606_14051701_14051879_14051974_14052095
H1_mix_00048424	chr19	+	1757	8	ISM	ENSG00000123146.20	ENST00000242786.6	3190	20	22845	-2	-81	0	3prime_fragment	FALSE	canonical	2	3	junction_1	3.94347821195493	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTTGCCTGCTGGTGGT	394	False	NA	14	True	ATTAAA	-18	NA	14404288	14408725	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_14404563_14405747_14405940_14406330_14406558_14406699_14406767_14406868_14406961_14407060_14407230_14407907_14408010_14408091
H1_mix_00048425	chr19	+	848	6	FSM	ENSG00000123143.13	ENST00000590097.5	848	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	472.743651464512	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGAGGGGCGGAGCTTTC	-7	True	NA	NA	False	NA	NA	NA	14433492	14450461	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_14433543_14434589_14434655_14441142_14441444_14443469_14443622_14446425_14446562_14450317
H1_mix_00048426	chr19	+	510	3	FSM	ENSG00000123143.13	ENST00000588200.1	548	3	38	0	38	0	multi-exon	FALSE	canonical	3	1040	junction_1	30	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGGAAGCCATGTGGCC	7351	False	NA	NA	False	NA	NA	NA	14450843	14458079	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_14451110_14451828_14452024_14458030
H1_mix_00048427	chr19	+	284	2	FSM	ENSG00000123143.13	ENST00000587215.1	363	2	79	0	-57	0	multi-exon	FALSE	canonical	3	1072	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTGAAGAAAGGGGACATT	NA	False	NA	NA	False	NA	NA	NA	14467564	14467924	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_14467642_14467717
H1_mix_00048428	chr19	+	724	5	FSM	ENSG00000099797.15	ENST00000593775.5	720	5	-4	0	0	0	multi-exon	FALSE	canonical	3	1307	junction_2	87.3709763022023	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGACTCGGGCTCTGTGTG	9	True	NA	-3	True	AATAAA	-16	NA	14564693	14565975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_14564993_14565065_14565124_14565201_14565291_14565617_14565664_14565743
H1_mix_00048429	chr19	+	996	7	NIC	ENSG00000160961.12	novel	1129	10	NA	NA	7	-710	combination_of_known_junctions	FALSE	canonical	3	13	junction_6	14.5878564414226	2712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTCTCTCTTCTTTTA	9	True	NA	NA	False	NA	NA	NA	14690080	14706552	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_14690151_14693450_14693495_14695009_14695134_14695565_14695662_14699198_14699282_14705053_14705171_14706090
H1_mix_00048430	chr19	+	1573	9	NIC	ENSG00000160961.12	novel	1129	10	NA	NA	-11	-14	combination_of_known_junctions	FALSE	canonical	1	1	junction_8	20.5270400934962	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCTTTATAAATTCCCC	16	True	NA	NA	False	ATTAAA	-4	NA	14690087	14709236	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_14690151_14693450_14693495_14695009_14695134_14695565_14695662_14699198_14699282_14705053_14705171_14706685_14706774_14707916_14707966_14708327
H1_mix_00048432	chr19	+	1859	7	ISM	ENSG00000105137.13	ENST00000600440.5	3058	8	-75	2262	-71	-899	5prime_fragment	FALSE	canonical	3	14	junction_1	27.7368587502863	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAATCTGTCTGTTTTGTC	29	False	NA	24	True	AGTAAA	-38	NA	15107329	15112723	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_15107522_15109256_15109398_15109703_15110349_15110520_15110736_15111312_15111440_15111631_15111793_15112345
H1_mix_00048435	chr19	+	312	3	FSM	ENSG00000167461.12	ENST00000590899.5	578	3	-3	269	0	-269	multi-exon	FALSE	canonical	3	1057	junction_1	45.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCACTGTGCATTGGTTAC	-2	True	NA	NA	False	NA	NA	NA	16111888	16121863	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_16112026_16118225_16118287_16121749
H1_mix_00048436	chr19	+	1724	3	FSM	ENSG00000127528.6	ENST00000248071.6	2820	3	-41	1137	-41	288	multi-exon	TRUE	canonical	0	0	junction_1	2.5	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGCTTGGAACTGGGGC	24	True	NA	NA	False	ATTAAA	-39	NA	16324784	16327548	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_16324999_16325215_16326033_16326855
H1_mix_00048437	chr19	+	2897	9	NNC	ENSG00000127511.10	novel	2556	8	NA	NA	-30	1359	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	127.175997637133	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCTGTTTTTAGTAGTGA	NA	False	NA	10	True	AATAAA	-21	NA	16829367	16857104	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_16829541_16829790_16829898_16831493_16831648_16841767_16841969_16846969_16847114_16851411_16851535_16853068_16853159_16854142_16855769_16856825
H1_mix_00048438	chr19	+	7760	41	NIC	ENSG00000099331.14	novel	7595	40	NA	NA	-69	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_15	49.9439122916898	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGTGCATGGGACGCC	NA	False	NA	10	True	AATAAA	-12	NA	17075707	17213284	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_17075875_17101659_17102558_17145396_17145492_17152643_17152707_17153966_17154067_17154314_17154416_17156908_17157039_17159394_17159485_17162349_17162467_17162987_17163123_17167942_17168065_17172335_17172478_17172758_17172964_17175662_17175742_17177796_17177887_17180926_17181041_17183828_17183869_17184864_17184988_17185920_17186002_17187934_17188046_17191096_17191220_17192745_17193063_17194555_17195474_17197791_17197859_17198183_17198309_17200292_17200427_17200638_17200830_17201925_17202025_17202129_17202304_17202844_17202884_17203146_17203259_17205262_17205337_17205959_17206153_17206247_17206377_17206678_17206785_17207112_17207245_17209585_17209710_17210332_17210381_17210714_17210853_17211650_17211775_17211894
H1_mix_00048440	chr19	+	7711	39	ISM	ENSG00000099331.14	ENST00000594824.5	7595	40	4	0	4	0	intron_retention	FALSE	canonical	3	124	junction_28	29.5710913897911	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGTGCATGGGACGCC	-8	True	NA	10	True	AATAAA	-12	NA	17075789	17213284	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_17075875_17101659_17102558_17145396_17145492_17152643_17152707_17153966_17154067_17154314_17154416_17156908_17157039_17159394_17159485_17162349_17162467_17162987_17163123_17167942_17168065_17172335_17172478_17172758_17172964_17175662_17175742_17180926_17181041_17183828_17183869_17184864_17184988_17185920_17186002_17187934_17188046_17191096_17191220_17192745_17193063_17194555_17195474_17197791_17197859_17198183_17198309_17200292_17200427_17200638_17200830_17201925_17202025_17202129_17202304_17202841_17202884_17203146_17203259_17205262_17205337_17205959_17206153_17206247_17206377_17206678_17206785_17207112_17207245_17209585_17209710_17210332_17210381_17210714_17210853_17211650
H1_mix_00048441	chr19	+	7639	41	NIC	ENSG00000099331.14	novel	7595	40	NA	NA	54	-4	combination_of_known_splicesites	FALSE	canonical	3	21	junction_15	51.0744309806776	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAAGTGTGTGCATGGGA	42	False	NA	6	True	AATAAA	-8	NA	17075839	17213280	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_17075875_17101659_17102558_17145396_17145492_17152643_17152707_17153966_17154067_17154314_17154416_17156908_17157039_17159394_17159485_17162349_17162467_17162987_17163123_17167942_17168065_17172335_17172478_17172758_17172964_17175662_17175742_17177796_17177887_17180926_17181041_17183828_17183869_17184864_17184988_17185920_17186002_17187934_17188046_17191096_17191220_17192745_17193063_17194555_17195474_17197791_17197859_17198183_17198309_17200292_17200427_17200638_17200830_17201925_17202025_17202129_17202304_17202841_17202884_17203146_17203259_17205262_17205337_17205959_17206153_17206247_17206377_17206678_17206785_17207112_17207245_17209585_17209710_17210332_17210381_17210714_17210853_17211650_17211787_17211894
H1_mix_00048442	chr19	+	5717	30	NIC	ENSG00000099331.14	novel	7595	40	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_4	59.2687303888188	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGCATGGGACGCCTG	NA	False	NA	12	True	AATAAA	-14	NA	17172374	17213286	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_17172478_17172758_17172964_17175662_17175742_17177796_17177887_17180926_17181041_17183828_17183869_17184864_17184988_17185920_17186002_17187934_17188046_17191096_17191220_17192745_17193063_17194555_17195474_17197791_17197859_17198183_17198309_17200292_17200427_17200638_17200830_17201925_17202025_17202129_17202304_17202844_17202884_17203146_17203259_17205262_17205337_17205959_17206153_17206247_17206377_17206678_17206785_17207112_17207245_17209585_17209710_17210332_17210381_17210714_17210853_17211650_17211787_17211894
H1_mix_00048443	chr19	+	453	4	NNC	ENSG00000053501.14	novel	845	8	NA	NA	-452	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	27.3536509852382	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCCCACCTTGTCTGTCTT	NA	False	NA	-1	True	AATAAA	-6	NA	17214893	17219819	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_17214955_17218363_17218392_17219212_17219388_17219630
H1_mix_00048445	chr19	+	597	5	NIC	ENSG00000053501.14	novel	637	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	44.7402223955134	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTCTTCCGTCTGTCC	-3	True	NA	9	True	AATAAA	-16	NA	17215391	17219829	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_17215508_17215801_17215852_17215991_17216071_17216168_17216322_17219630
H1_mix_00048446	chr19	+	1145	6	NIC	ENSG00000099330.9	novel	1111	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	19	junction_1	46.8486926178309	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACTGAGTATAATTACTT	-10	True	NA	6	True	AATAAA	-14	NA	17226224	17229215	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_17226354_17226692_17226870_17226993_17227200_17227839_17228006_17228255_17228310_17228802
H1_mix_00048447	chr19	+	931	5	NIC	ENSG00000099330.9	novel	1111	6	NA	NA	0	0	intron_retention	FALSE	canonical	2	3	junction_1	57.8246271064501	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACTGAGTATAATTACTT	-10	True	NA	6	True	AATAAA	-14	NA	17226224	17229215	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_17226317_17226993_17227200_17227839_17228006_17228255_17228310_17228802
H1_mix_00048448	chr19	+	1214	4	ISM	ENSG00000099330.9	ENST00000594283.5	1201	5	376	-13	4	0	3prime_fragment	FALSE	canonical	3	122	junction_1	12.9614813968157	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACTGAGTATAATTACTT	-6	True	NA	6	True	AATAAA	-14	NA	17226618	17229215	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_17227200_17227839_17228006_17228255_17228310_17228802
H1_mix_00048451	chr19	+	2160	9	FSM	ENSG00000160117.16	ENST00000594072.6	2294	9	134	0	-44	0	multi-exon	FALSE	canonical	2	2	junction_5	9.43066805693001	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCTGTAAGAGGCGTTT	95	False	NA	NA	False	NA	NA	NA	17281832	17286854	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17281983_17282056_17282210_17282655_17282762_17282863_17283003_17283224_17283885_17284088_17284267_17285430_17285591_17285680_17285820_17286379
H1_mix_00048452	chr19	+	2477	9	NNC	ENSG00000130299.17	novel	2566	9	NA	NA	14	0	intron_retention	FALSE	canonical	0	0	junction_8	85.3543166746709	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTCTACAAATTGTCATT	63	False	NA	28	True	TATAAA	-15	NA	17337631	17342723	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_17337665_17338007_17338256_17338364_17338452_17338538_17338742_17338953_17339027_17339122_17339267_17339433_17339600_17341043_17341321_17341477
H1_mix_00048453	chr19	+	1141	5	FSM	ENSG00000130479.11	ENST00000594212.5	1132	5	-9	0	-9	0	multi-exon	FALSE	canonical	2	36	junction_1	290.278637691443	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGGGCGTGGGCCGGCTG	NA	False	NA	NA	False	NA	NA	NA	17719470	17726543	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17719621_17720985_17721038_17724125_17724209_17725048_17725190_17725828
H1_mix_00048454	chr19	+	3207	29	NNC	ENSG00000130475.15	novel	3214	29	NA	NA	-22	0	at_least_one_novel_splicesite	TRUE	canonical	1	4	junction_21	81.3705542062774	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAATAAAAAAGGAAAC	NA	False	NA	-11	True	AATAAA	-14	NA	17747695	17788538	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_17747815_17754316_17754362_17754591_17754686_17755121_17755192_17762761_17762854_17764374_17764450_17766668_17766811_17770424_17770578_17770791_17770897_17772456_17772556_17772644_17772742_17774238_17774284_17774393_17774479_17775055_17775081_17775455_17775514_17775982_17776162_17776246_17776272_17776634_17776687_17778136_17778229_17778608_17778885_17781230_17781348_17781451_17781540_17781711_17781821_17783016_17783173_17784102_17784236_17784724_17784925_17786573_17786630_17787681_17787847_17788283
H1_mix_00048456	chr19	+	1653	9	NIC	ENSG00000130475.15	novel	3118	27	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	72.2875118882923	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGGAAGTATCCTTTGCG	-13	True	NA	19	True	AATAAA	-44	NA	17778423	17788568	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_17778885_17781451_17781540_17781711_17781821_17783016_17783173_17784102_17784236_17784724_17784925_17786573_17786630_17787681_17787847_17788283
H1_mix_00048458	chr19	+	403	4	FSM	ENSG00000105641.4	ENST00000597109.1	573	4	170	0	170	0	multi-exon	FALSE	canonical	2	3	junction_1	0.471404520791032	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTCCTATCTCTATTACG	183	False	NA	NA	False	NA	NA	NA	17882148	17888378	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_17882220_17883680_17883768_17883849_17884047_17888330
H1_mix_00048459	chr19	+	1401	1	FSM	ENSG00000273654.1	ENST00000614660.1	1401	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGGAGACTGGGGGAAAG	110	False	NA	NA	False	NA	NA	NA	18030628	18032029	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18030600_18032000
H1_mix_00048460	chr19	+	5946	27	NIC	ENSG00000099308.11	novel	5896	27	NA	NA	-12	1	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	10.0855072069431	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGCTCCAACGTCTGGAT	-12	True	NA	26	True	AATAAA	-18	NA	18097765	18151688	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_18097832_18107586_18107619_18121684_18121774_18121849_18121923_18122672_18122752_18123216_18123375_18123579_18123656_18123938_18124149_18124264_18124367_18124641_18124775_18128399_18128459_18128865_18128952_18130493_18130703_18131908_18132048_18134578_18134712_18134816_18134983_18135739_18135842_18137238_18137362_18139014_18139125_18141881_18142016_18143762_18144008_18144465_18144694_18145002_18145230_18145742_18145866_18146880_18147045_18147442_18147625_18149190
H1_mix_00048461	chr19	+	1771	17	NIC	ENSG00000130511.16	novel	1721	17	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	108	junction_16	53.8678939629164	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTCTCAGATTCCCTCT	3	True	NA	20	True	AATAAA	-26	NA	18419400	18434562	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_18419708_18427350_18427424_18427751_18427814_18427897_18427983_18430840_18430931_18431646_18431707_18431792_18431863_18431999_18432071_18432146_18432215_18432558_18432605_18432699_18432736_18432828_18432884_18432972_18433044_18433134_18433214_18433584_18433614_18433709_18433933_18434216
H1_mix_00048463	chr19	+	748	5	FSM	ENSG00000221983.8	ENST00000595158.5	743	5	0	-5	0	-2	multi-exon	FALSE	canonical	3	142	junction_1	2434.17238245363	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGTGTCCTCATGGCTG	18	False	NA	39	True	AATAAA	-27	NA	18571881	18575239	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18572146_18573292_18573404_18573661_18573749_18574869_18574973_18575056
H1_mix_00048464	chr19	+	500	2	FSM	ENSG00000005007.13	ENST00000594243.1	683	2	0	183	0	-183	multi-exon	FALSE	canonical	3	312	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGTGCGGCACTTTATA	2046	False	NA	NA	False	NA	NA	NA	18854912	18855497	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_18855039_18855123
H1_mix_00048465	chr19	+	675	4	ISM	ENSG00000181035.14	ENST00000318596.8	3267	8	-8	7794	-8	2	5prime_fragment	FALSE	canonical	2	26	junction_1	6.37704215656966	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGGGATGCCAAACACCA	NA	False	NA	NA	False	AATAAA	-20	NA	19063985	19105236	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_19064116_19096090_19096206_19101780_19101887_19104912
H1_mix_00048467	chr19	+	5118	6	FSM	ENSG00000129933.21	ENST00000587709.5	3751	6	-1374	7	-601	0	multi-exon	FALSE	canonical	3	152	junction_2	15.0279739153354	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTAATATTCTACTCG	905	False	NA	4	True	ATTAAA	-13	NA	19346275	19357753	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19348939_19349154_19349233_19349324_19349437_19354354_19354446_19355263_19355392_19355707
H1_mix_00048469	chr19	+	5712	12	NIC	ENSG00000167491.18	novel	5671	12	NA	NA	-35	0	combination_of_known_junctions	TRUE	canonical	3	73	junction_1	156.104277502397	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGACTTTTCTTTTGTCCC	1	True	NA	13	True	AATAAA	-16	NA	19385790	19508927	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_19386139_19465339_19465615_19492305_19492439_19492580_19492713_19494293_19494384_19495753_19495886_19496051_19496220_19498442_19498723_19501117_19501417_19501968_19502044_19502330_19502527_19505343
H1_mix_00048471	chr19	+	879	4	NIC	ENSG00000167491.18	novel	5714	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	110	junction_1	237.265439727089	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCGTGCCTGTCTCCCCT	5	True	NA	NA	False	AATACA	-22	NA	19405674	19492711	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_19406020_19465344_19465615_19492305_19492439_19492580
H1_mix_00048472	chr19	+	970	7	FSM	ENSG00000250067.12	ENST00000514277.6	979	7	9	0	9	0	multi-exon	TRUE	canonical	0	0	junction_6	51.3336038953909	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGCCTCGCCTCCGCCTCC	10	False	NA	6	True	AATAAA	-17	NA	19528919	19537581	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_19528992_19529363_19529514_19532631_19532741_19535033_19535145_19535336_19535451_19535528_19535680_19537318
H1_mix_00048473	chr19	+	632	2	FSM	ENSG00000213988.11	ENST00000492328.1	632	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTACAACACTCTGAGCC	8	False	NA	NA	False	NA	NA	NA	20078036	20080319	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_20078136_20079786
H1_mix_00048475	chr19	+	559	1	FSM	ENSG00000270716.1	ENST00000604600.1	301	1	-325	67	-325	-67	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTCTGAAACAGACAAAGCA	NA	False	NA	NA	False	NA	NA	NA	20136607	20137166	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_20136600_20137200
H1_mix_00048476	chr19	+	3111	2	Antisense	novelGene_ENSG00000231205.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	0	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGGCGTTTTCCTACC	12	False	NA	29	True	AATAAA	-20	NA	20362485	20371958	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr19_+_20362795_20369156
H1_mix_00048477	chr19	+	492	5	FSM	ENSG00000105750.15	ENST00000601284.5	483	5	-9	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	40.7768316572046	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATTCTTTCCAAAAAGTG	-17	True	NA	NA	False	AATATA	-2	NA	20923275	20948791	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_20923404_20934023_20934151_20934948_20935048_20946299_20946390_20948743
H1_mix_00048478	chr19	+	10440	5	NIC	ENSG00000160352.16	novel	2696	7	NA	NA	4	1475	intron_retention	FALSE	canonical	3	64	junction_4	15.5402702679201	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTTGTTGTTGTTTCAA	18	False	NA	19	True	AATAAA	-19	NA	21082162	21126745	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_21082349_21083977_21084070_21098184_21098312_21098814_21098911_21116806
H1_mix_00048480	chr19	+	9422	7	NNC	ENSG00000196705.8	novel	1971	6	NA	NA	-3	254	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	26.8871096748361	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATCTTTACAAGATAGTT	NA	False	NA	NA	False	AATAAA	-34	NA	21142020	21196307	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_21142187_21143550_21143644_21166334_21166462_21167567_21167667_21175452_21175475_21182622_21186288_21191057
H1_mix_00048481	chr19	+	740	4	NIC	ENSG00000196268.12	novel	5023	4	NA	NA	0	251	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	3.09120616516523	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTGAAGAATGTGGCAAAG	6	True	NA	NA	False	CATAAA	-30	NA	21397132	21423291	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_21397268_21405128_21405256_21405757_21405857_21422912
H1_mix_00048485	chr19	+	1203	6	NNC	ENSG00000183850.14	novel	464	3	NA	NA	26	-1335	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_3	28.8055550198221	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACCCTATAAATGTGAAG	13	True	NA	NA	False	CATAAA	-18	NA	23075235	23145886	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_23075388_23098339_23098414_23102287_23102426_23134079_23134207_23135947_23136044_23145270
H1_mix_00048486	chr19	+	1010	1	FSM	ENSG00000268469.1	ENST00000601117.1	544	1	-413	-53	-413	53	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGGCATGACCTTAGC	NA	False	NA	NA	False	NA	NA	NA	23235894	23236904	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_23235900_23236900
H1_mix_00048488	chr19	+	535	4	FSM	ENSG00000213096.11	ENST00000339642.10	511	4	-24	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	46.4494946749214	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTAGTGTCCTCTCTAAT	2	True	NA	12	True	AATAAA	-13	NA	24087159	24107349	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_24087338_24105939_24106067_24106547_24106644_24107215
H1_mix_00048489	chr19	+	1638	1	FSM	ENSG00000276030.1	ENST00000620377.1	381	1	-1262	5	-1262	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGAGTTTGCTATCTTGCT	NA	False	NA	5	True	AATAAA	-14	NA	24145438	24147076	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_24145400_24147100
H1_mix_00048491	chr19	+	684	1	FSM	ENSG00000267264.1	ENST00000586818.1	523	1	37	-198	37	198	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTAAATTTATTTACTT	9544	False	NA	NA	False	NA	NA	NA	27803574	27804258	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_27803600_27804300
H1_mix_00048492	chr19	+	581	1	FSM	ENSG00000266910.2	ENST00000587506.2	759	1	335	-157	335	157	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTTTTTCATCAGCCTTA	NA	False	NA	20	True	AGTAAA	-30	NA	30037757	30038338	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_30037800_30038300
H1_mix_00048493	chr19	+	7608	19	NIC	ENSG00000178904.19	novel	6015	19	NA	NA	17	0	intron_retention	FALSE	canonical	2	9	junction_15	21.4635062085725	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAAGATGAGTGTCTTGC	15	False	NA	NA	False	AGTAAA	-14	NA	32405786	32485887	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_32406303_32408216_32408357_32411238_32411373_32432715_32432807_32436445_32436568_32437193_32437340_32439111_32439236_32439775_32439911_32453144_32453277_32454938_32455041_32458099_32458174_32458350_32458510_32463365_32463489_32463868_32463981_32464727_32464785_32467473_32468814_32477521_32477655_32480398_32480558_32482078
H1_mix_00048495	chr19	+	546	6	FSM	ENSG00000178904.19	ENST00000590651.1	546	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	32.5539552128463	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTGATGTCTCTGCCA	NA	False	NA	NA	False	AATAAA	-25	NA	32458468	32469119	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_32458510_32463365_32463489_32463868_32463981_32464727_32464785_32468730_32468814_32468989
H1_mix_00048497	chr19	+	2482	6	FSM	ENSG00000153885.15	ENST00000430256.3	2555	6	73	0	73	0	multi-exon	FALSE	canonical	3	49	junction_1	3.87814388593306	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGAGGCTCTGTCCTGT	36	False	NA	18	True	CATAAA	-19	NA	33798458	33814243	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_33798767_33800427_33800521_33801166_33801343_33806862_33807008_33811246_33811553_33812789
H1_mix_00048498	chr19	+	828	6	FSM	ENSG00000105220.17	ENST00000587384.6	829	6	1	0	1	0	multi-exon	FALSE	canonical	1	1	junction_1	615.693105369875	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCTGCGGAACCGGTCAA	NA	False	NA	NA	False	NA	NA	NA	34359587	34368602	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_34359897_34364809_34365020_34365259_34365389_34366344_34366436_34366782_34366852_34368582
H1_mix_00048500	chr19	+	2488	16	NIC	ENSG00000126261.13	novel	4005	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_12	217.967479735446	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATGCCTGCACAGTTCC	-9	True	NA	27	True	AATAAA	-20	NA	34428380	34469890	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_34428571_34430575_34430660_34431860_34431932_34433347_34433413_34434867_34434969_34438644_34438767_34443843_34443912_34444999_34445122_34450264_34450365_34451980_34452148_34454259_34454354_34454443_34454557_34460469_34460567_34464025_34464132_34466877_34467015_34469039
H1_mix_00048501	chr19	+	4127	2	Genic_Genomic	ENSG00000142279.13	novel	13545	8	NA	NA	3840	-5938	multi-exon	FALSE	non_canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGAAAACAGACTCTTCCA	4403	False	NA	NA	False	AATAAA	-36	NA	34486367	34506366	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr19_+_34486383_34502254
H1_mix_00048502	chr19	+	2578	5	NIC	ENSG00000089335.22	novel	2893	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	97.5756117070244	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTTTCTCTGTGACTGT	18	True	NA	27	True	AATAAA	-37	NA	34677706	34686394	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_34677857_34678736_34678814_34682776_34682898_34683151_34683239_34684251
H1_mix_00048503	chr19	+	5713	4	FSM	ENSG00000197841.15	ENST00000492450.3	5792	4	0	79	0	-79	multi-exon	FALSE	canonical	3	37	junction_2	20.2703943940144	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCTTGGACAAACTATTT	-1	True	NA	NA	False	TTTAAA	-29	NA	34734242	34745299	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_34735047_34739147_34739269_34739522_34739622_34740610
H1_mix_00048504	chr19	+	2645	6	NIC	ENSG00000168661.15	novel	2583	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	8	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACCACTGCTGAACTTCA	23	False	NA	2	True	AATAAA	-16	NA	34926979	34945164	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_34927283_34929883_34929957_34931842_34931994_34933627_34933724_34942593_34942674_34943222
H1_mix_00048505	chr19	+	494	3	ISM	ENSG00000266964.6	ENST00000590462.1	620	5	591	9	591	-2	intron_retention	FALSE	canonical	3	183	junction_2	7.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGACAGCACTTTGTCGGTC	9	False	NA	17	True	AATAAA	-14	NA	35141455	35143046	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_35141573_35142471_35142522_35142719
H1_mix_00048507	chr19	+	2535	10	NIC	ENSG00000105699.17	novel	2274	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	251	junction_7	600.78974773847	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGCTCTGGAGAGAACCA	4	True	NA	23	True	AATAAA	-11	NA	35248391	35267960	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_35249132_35250314_35250660_35258944_35259065_35261924_35261982_35262545_35262693_35266358_35266533_35266678_35266739_35266838_35266968_35267108_35267735_35267823
H1_mix_00048509	chr19	+	648	8	FSM	ENSG00000105698.16	ENST00000379134.7	648	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	40.9962666294264	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCCGCCACCACCACGCAG	-5	True	NA	NA	False	NA	NA	NA	35269101	35279256	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_35269164_35269445_35269493_35269580_35269700_35270758_35270806_35271082_35271142_35278697_35278793_35278945_35279075_35279166
H1_mix_00048524	chr19	+	4935	20	NIC	ENSG00000004777.19	novel	4352	21	NA	NA	18	0	intron_retention	TRUE	canonical	2	13	junction_5	16.7406483589861	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGAATAAAATGGTGAAAAT	33	False	NA	-2	True	ACTAAA	-17	NA	35775592	35788799	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_35775665_35777644_35777743_35777823_35777909_35778279_35778361_35778463_35778602_35779031_35779125_35780210_35780334_35780420_35780499_35780581_35780649_35780756_35780817_35780919_35781073_35781149_35781253_35782372_35782518_35782596_35782680_35782761_35782870_35784171_35785107_35785188_35785335_35785408_35785484_35786412_35787073_35787167
H1_mix_00048525	chr19	+	1628	6	ISM	ENSG00000126259.20	ENST00000360202.10	2980	15	4584	0	4389	0	3prime_fragment	FALSE	canonical	3	36	junction_4	5.32916503778969	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTCTTAGGGAGTCTAC	4487	False	NA	11	True	AATAAA	-19	NA	35861494	35867136	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_35861642_35861804_35862025_35862492_35862598_35862926_35863037_35864647_35864714_35866156
H1_mix_00048526	chr19	+	2072	15	NNC	ENSG00000105290.13	novel	1179	8	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_11	46.0379723484776	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGTCTGAGTCTCTGTG	783	False	NA	16	True	AATAAA	-17	NA	35870487	35879792	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_35870571_35870895_35871029_35871236_35871350_35871611_35871746_35871857_35872037_35872482_35872614_35873638_35873714_35874503_35874663_35874740_35874870_35876516_35876617_35877717_35877826_35878583_35878655_35878889_35878953_35879073_35879218_35879342
H1_mix_00048527	chr19	+	1156	8	FSM	ENSG00000075702.19	ENST00000681809.1	1143	8	-13	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	105.29782833972	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGCCCTGTGGGGAGAG	5	True	NA	NA	False	NA	NA	NA	36054907	36071716	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_36055149_36058779_36058872_36059967_36060031_36065957_36066016_36066207_36066428_36067305_36067444_36067827_36068011_36071555
H1_mix_00048529	chr19	+	1385	6	FSM	ENSG00000075702.19	ENST00000680597.1	1385	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	132.461315107468	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTCCTGGTGTCTGTTTG	599	False	NA	18	True	AATAAA	-18	NA	36102751	36105108	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_36102852_36102947_36103043_36103155_36103208_36103342_36103982_36104517_36104676_36104767
H1_mix_00048534	chr19	+	636	5	NNC	ENSG00000233527.10	novel	1033	5	NA	NA	43	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	16.9022927438854	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGAAGTTTTGGGGTGG	-13	True	NA	6	True	ATTAAA	-20	NA	36573419	36594708	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_36573526_36574820_36574901_36577140_36577238_36593845_36593932_36594441
H1_mix_00048543	chr19	+	3130	8	NIC	ENSG00000181666.19	novel	3464	11	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	7	junction_5	43.985155195259	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCCTTCAATTGTCAGTG	3	True	NA	29	True	AATAAA	-19	NA	37317903	37364444	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37324795_37324937_37347189_37347317_37347776_37347873_37362105
H1_mix_00048544	chr19	+	5301	5	NIC	ENSG00000181666.19	novel	2929	6	NA	NA	0	0	intron_retention	FALSE	canonical	2	3	junction_2	43.1820275114543	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTTCAATTGTCAGTGTA	49	False	NA	31	True	AATAAA	-21	NA	37334711	37364446	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_37334783_37335168_37335258_37344609_37347317_37347776_37347873_37362108
H1_mix_00048545	chr19	+	2939	4	ISM	ENSG00000181666.19	ENST00000589392.5	2152	5	212	-582	155	0	3prime_fragment	FALSE	canonical	3	23	junction_3	39.3389826451518	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTTCAATTGTCAGTGTA	147	False	NA	31	True	AATAAA	-21	NA	37334882	37364446	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_37335258_37347189_37347317_37347776_37347873_37362105
H1_mix_00048550	chr19	+	8292	22	NIC	ENSG00000105738.11	novel	785	4	NA	NA	-92	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	17.228489825809	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTGTGTTCACTTTT	109	False	NA	14	True	AATAAA	-14	NA	37932253	38208369	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_37932693_38029088_38029157_38081255_38083100_38088720_38088852_38099961_38100151_38101051_38101227_38106536_38106641_38110226_38110385_38119305_38119883_38130497_38130773_38141183_38141436_38142572_38142711_38152839_38152968_38162252_38162372_38164478_38164907_38182518_38182741_38192144_38192311_38193536_38193781_38198388_38198533_38201861_38201998_38204126_38204209_38206096
H1_mix_00048555	chr19	+	3807	2	FSM	ENSG00000167642.13	ENST00000585357.1	3807	2	0	0	0	0	multi-exon	FALSE	canonical	3	3278	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGGGAGTCCTAATTTC	586	False	NA	33	True	AATAAA	-43	NA	38288405	38292468	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_38290281_38290536
H1_mix_00048561	chr19	+	516	4	FSM	ENSG00000178982.10	ENST00000586932.5	667	4	0	151	0	-11	multi-exon	FALSE	canonical	3	1966	junction_1	164.130706721469	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGACTGGCTTCCTGCTTTG	-10	True	NA	NA	False	NA	NA	NA	38619185	38626181	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_38619328_38620336_38620436_38624076_38624198_38626027
H1_mix_00048562	chr19	+	1334	7	FSM	ENSG00000178982.10	ENST00000545173.6	1327	7	-7	0	0	0	multi-exon	FALSE	canonical	3	1956	junction_6	154.053742426322	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCGTCTACACACATGTAA	-10	True	NA	NA	False	ATTAAA	-14	NA	38619185	38635744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_38619328_38620336_38620436_38624076_38624198_38626027_38626103_38632429_38632497_38632600_38632679_38634992
H1_mix_00048569	chr19	+	4879	14	NNC	ENSG00000179134.16	novel	4680	14	NA	NA	53	-2	intron_retention	FALSE	canonical	3	37	junction_2	285.349406909614	52	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAATTCTGACCTTCGTTGT	27	False	NA	5	True	AAAACA	-12	NA	39342520	39385696	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_39342577_39354005_39354067_39355054_39355151_39356688_39357090_39369654_39370126_39375649_39375890_39376436_39376547_39376704_39376792_39377484_39377825_39378503_39378590_39379965_39380085_39380586_39380786_39380989_39381114_39383207
H1_mix_00048579	chr19	+	865	2	FSM	ENSG00000105223.20	ENST00000480030.1	903	2	0	38	0	-38	multi-exon	FALSE	canonical	3	1874	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGTTGGGAACATGGTG	2156	False	NA	NA	False	NA	NA	NA	40369908	40370854	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_40370029_40370109
H1_mix_00048581	chr19	+	5533	31	NIC	ENSG00000090006.18	novel	5032	33	NA	NA	4	0	intron_retention	FALSE	canonical	3	44	junction_1	90.7903812820132	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGCCTCCTCCTGTCT	28	False	NA	23	True	ATTAAA	-17	NA	40598528	40629818	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_40599256_40599420_40599557_40600067_40600178_40605034_40605227_40605404_40605653_40605728_40605832_40606232_40606308_40606403_40606527_40607364_40607530_40608219_40608370_40608483_40608604_40609529_40609662_40609745_40609872_40610531_40610658_40611151_40611395_40611858_40611985_40612072_40612193_40613064_40613197_40613403_40613530_40613915_40614039_40614314_40614447_40617099_40617226_40619346_40619494_40622400_40622668_40622949_40623022_40623603_40623733_40623935_40624083_40625856_40626010_40626974_40627356_40627704_40627858_40629395
H1_mix_00048583	chr19	+	2332	10	NIC	ENSG00000090006.18	novel	3140	19	NA	NA	46	-1	intron_retention	FALSE	canonical	3	60	junction_4	106.914295894734	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTTTGCCTCCTCCTGT	73	False	NA	21	True	ATTAAA	-15	NA	40613501	40629816	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_40614039_40614314_40614447_40616888_40617021_40619346_40619494_40623603_40623733_40623935_40624083_40625856_40626010_40626974_40627356_40627704_40627858_40629395
H1_mix_00048584	chr19	+	2378	12	ISM	ENSG00000090006.18	ENST00000243562.13	3140	19	4451	1	5	-1	3prime_fragment	FALSE	canonical	3	77	junction_2	87.0761991752621	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTTTGCCTCCTCCTGT	23	True	NA	21	True	ATTAAA	-15	NA	40614196	40629816	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_40614447_40616888_40617021_40617099_40617226_40619346_40619494_40622400_40622668_40622949_40623022_40623603_40623733_40623935_40624083_40625856_40626010_40626974_40627356_40627704_40627858_40629395
H1_mix_00048597	chr19	+	502	6	FSM	ENSG00000105372.8	ENST00000221975.6	500	6	-2	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13281.5229909826	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTCTGGGTCTCTTTT	-1	True	NA	31	True	AATAAA	-16	NA	41860254	41871416	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_41860290_41860784_41860846_41861111_41861213_41869030_41869215_41869698_41869754_41871350
H1_mix_00048602	chr19	+	1956	2	FSM	ENSG00000188368.11	ENST00000499536.2	1956	2	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGATTTTCAGTGAGTT	1796	False	NA	6	True	AATAAA	-16	NA	42308773	42310814	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_42310186_42310270
H1_mix_00048604	chr19	+	7185	35	ISM	ENSG00000105429.13	ENST00000251268.11	11137	42	20	15180	20	9917	5prime_fragment	FALSE	canonical	2	9	junction_30	7.87378814754293	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTAATTTTGTCGATAT	11	True	NA	18	True	TTTAAA	-22	NA	42325654	42363585	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_+_42326431_42333604_42333769_42334006_42334214_42335034_42335216_42335296_42335386_42335930_42336347_42336806_42336953_42337083_42337207_42343476_42343632_42343953_42344074_42344440_42344586_42344669_42344834_42348271_42348473_42349498_42349700_42350147_42350385_42351215_42351335_42351428_42351561_42351647_42351762_42352207_42352457_42352927_42353128_42353464_42353676_42353774_42354025_42354587_42354721_42355757_42356006_42356082_42356194_42356334_42356454_42356773_42356982_42357403_42357585_42358143_42358308_42358786_42358955_42359097_42359243_42360774_42361007_42362089_42362214_42362383_42362598_42363047
H1_mix_00048617	chr19	+	1407	5	NIC	ENSG00000167380.17	novel	817	6	NA	NA	12	0	intron_retention	FALSE	canonical	3	33	junction_4	47.1824914560476	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGTGTGAAATCTTAAAT	-7	True	NA	NA	False	ATTAAA	-16	NA	44165127	44175429	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_44165808_44170034_44170096_44172087_44172215_44172859_44172953_44174983
H1_mix_00048618	chr19	+	3145	6	NIC	ENSG00000131115.16	novel	545	5	NA	NA	-15	-5	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	16.963490206912	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTAGCTAAGGACTCATG	55	False	NA	10	True	AATAAA	-15	NA	44212607	44237262	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_44212764_44213089_44213245_44217790_44217853_44228445_44228573_44229732_44229817_44234701
H1_mix_00048626	chr19	+	1246	3	NNC	ENSG00000142252.11	novel	576	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	157	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCCCAGTGCTCCCCTC	-9	True	NA	-32	True	ATTAAA	-30	NA	45079257	45090869	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_45079618_45079906_45080030_45090106
H1_mix_00048643	chr19	+	674	4	FSM	ENSG00000178980.16	ENST00000601937.5	674	4	0	0	0	0	multi-exon	FALSE	canonical	3	2940	junction_2	150.471112030036	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCTGTGAGGAGTGTAT	263	False	NA	44	True	AATAAA	-22	NA	47780814	47784686	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_47780918_47781107_47781183_47781289_47781389_47784289
H1_mix_00048644	chr19	+	2503	1	FSM	ENSG00000178980.16	ENST00000602163.1	2503	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTGCCTGTGAGGAGT	1628	False	NA	40	True	AATAAA	-18	NA	47782179	47784682	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_47782200_47784700
H1_mix_00048649	chr19	+	618	2	FSM	ENSG00000063176.16	ENST00000599033.1	618	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCGCTGGGCCACTGCCCT	88	False	NA	NA	False	NA	NA	NA	48624471	48626301	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_48624856_48626067
H1_mix_00048660	chr19	+	799	8	FSM	ENSG00000142541.18	ENST00000484279.5	794	8	-5	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	6114.36257294817	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTCTGAGCCCAATAAAGA	-3	True	NA	-8	True	AATACA	-28	NA	49487602	49491807	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49487645_49489849_49490091_49490231_49490298_49490474_49490577_49490778_49490865_49491039_49491100_49491424_49491548_49491728
H1_mix_00048661	chr19	+	2317	3	FSM	ENSG00000142541.18	ENST00000488946.1	2312	3	-5	0	0	0	multi-exon	FALSE	canonical	3	11170	junction_1	3478.5	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGGCGTCTTTGCACT	-3	True	NA	13	True	AATAAA	-13	NA	49487602	49492305	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49487645_49489849_49491548_49491728
H1_mix_00048667	chr19	+	1413	13	FSM	ENSG00000104960.15	ENST00000601638.5	1413	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	455.93447994202	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCCCAATAAAGCCTTTT	111	False	NA	0	True	NA	NA	NA	49850827	49860713	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_49850956_49854405_49854544_49854651_49854735_49854830_49854889_49854969_49855078_49856974_49857131_49857692_49857783_49857903_49857978_49858056_49858115_49858548_49858654_49859985_49860184_49860267_49860337_49860565
H1_mix_00048682	chr19	+	5218	5	NIC	ENSG00000203326.12	novel	6133	4	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	3	13	junction_4	23.2217570394662	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAAAACAAAAGTCAAATGA	-17	True	NA	-3	True	AATAAA	-17	NA	53365695	53386579	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_53365760_53372214_53372297_53375769_53375897_53380721_53384057_53384969
H1_mix_00048683	chr19	+	937	6	NIC	ENSG00000160336.17	novel	938	6	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	139.330685780269	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGCATATGTGTGTCCT	-3	True	NA	6	True	AATAAA	-16	NA	53431983	53450325	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_53432029_53445000_53445124_53446226_53446338_53447195_53447284_53449511_53449639_53449882
H1_mix_00048684	chr19	+	4136	6	NIC	ENSG00000160336.17	novel	4061	5	NA	NA	0	-11	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	147.891040972738	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTTTCTGATTTGGATG	NA	False	NA	9	True	AATATA	-10	NA	53445000	53458249	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_53445124_53446226_53446338_53447195_53447284_53449511_53449639_53449878_53449966_53454649
H1_mix_00048685	chr19	+	4247	6	NNC	ENSG00000160336.17	novel	4061	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	140.777270892712	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGATGAGTTTTATTTC	NA	False	NA	20	True	AATATA	-21	NA	53445000	53458260	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_53445220_53446226_53446338_53447195_53447284_53449511_53449639_53451773_53451865_53454649
H1_mix_00048688	chr19	+	3979	6	FSM	ENSG00000130844.19	ENST00000648122.1	3975	6	-4	0	-4	0	multi-exon	FALSE	canonical	1	7	junction_1	72.3922647801545	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTTGTTGGATATTCAA	-4	True	NA	14	True	AATAAA	-17	NA	53538425	53580269	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_53538492_53539215_53539283_53555844_53555909_53569303_53569386_53571603_53571731_53576696
H1_mix_00048693	chr19	+	1492	3	FSM	ENSG00000170889.14	ENST00000441429.1	1600	3	0	108	0	0	multi-exon	FALSE	canonical	3	7190	junction_1	291	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGAAGGGCCAGGGTGGG	-2	True	NA	-99	True	NA	NA	NA	54201159	54207522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_54201282_54201486_54201610_54206275
H1_mix_00048696	chr19	+	5872	15	NIC	ENSG00000167615.17	novel	5789	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	168	junction_1	56.6350652179804	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGCACGCTCCTGCTTTG	10	True	NA	15	True	ATTAAA	-15	NA	54449223	54462015	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_54449307_54451289_54451383_54452092_54452268_54452650_54452753_54453545_54453657_54454429_54454683_54454950_54455093_54455363_54455568_54455966_54456246_54456324_54456466_54456635_54456922_54457746_54457849_54457933_54458003_54458102_54458233_54458313
H1_mix_00048712	chr19	+	1930	5	NIC	ENSG00000167685.15	novel	562	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	145.095658101819	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCGGAGTCTGAGCTCTGT	12	True	NA	15	True	AATAAA	-15	NA	56141726	56160886	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_56141795_56146246_56146421_56146889_56147209_56158493_56158603_56159626
H1_mix_00048716	chr19	+	779	3	FSM	ENSG00000166770.12	ENST00000586091.7	801	3	8	14	0	5	multi-exon	FALSE	canonical	2	4	junction_1	17.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTACTGACAAACTGGATTT	0	True	NA	11	True	AATAAA	-7	NA	56478156	56495425	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_56478378_56494162_56494343_56495047
H1_mix_00048724	chr19	+	2860	3	FSM	ENSG00000171649.12	ENST00000599456.1	2860	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	74	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATAGGACCTAGAAATCT	109	False	NA	NA	False	TATAAA	-41	NA	57584259	57592390	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57584613_57588538_57588666_57590010
H1_mix_00048725	chr19	+	4798	3	FSM	ENSG00000183647.11	ENST00000332854.11	4793	3	-5	0	-5	0	multi-exon	FALSE	canonical	2	4	junction_1	11.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACTTGATAAGTTCTGACA	-19	True	NA	11	True	AATAAA	-21	NA	57599879	57610098	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57600135_57604276_57604407_57605685
H1_mix_00048727	chr19	+	454	2	NIC	ENSG00000183647.11	novel	2742	4	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGCTTGTAGTCATAGTT	2	True	NA	5	True	AATAAA	-29	NA	57599900	57612722	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_57600135_57612502
H1_mix_00048728	chr19	+	2629	4	FSM	ENSG00000121417.14	ENST00000541801.5	2629	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTGATTCACTCTTTGA	-20	True	NA	30	True	AATAAA	-31	NA	57633166	57642779	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57633437_57634628_57634756_57639911_57640068_57640703
H1_mix_00048729	chr19	+	3082	3	NIC	ENSG00000121417.14	novel	2641	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	51	junction_1	20	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACCTTTATCTTGGCATT	-19	True	NA	15	True	AATAAA	-16	NA	57633167	57642764	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_57634062_57634628_57634756_57640703
H1_mix_00048730	chr19	+	4610	2	FSM	ENSG00000204519.11	ENST00000599402.1	593	2	28	-4045	0	232	multi-exon	FALSE	canonical	3	31	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAGTGGTATCTCACTGT	3	True	NA	NA	False	NA	NA	NA	57682034	57690880	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_57682245_57686480
H1_mix_00048731	chr19	+	745	4	Fusion	ENSG00000269343.9_ENSG00000198466.12	novel	1670	4	NA	NA	2	-9	multi-exon	FALSE	canonical	2	4	junction_3	25.2234458831902	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGAGTGCCTGGGGAG	-7	True	NA	14	True	CATAAA	-14	NA	57819722	57854099	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_+_57819946_57839022_57839150_57840837_57840909_57853775
H1_mix_00048736	chr19	+	2559	8	FSM	ENSG00000171606.18	ENST00000610905.4	2559	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	38.5888849387531	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGTAGAACCTGTGT	49	False	NA	20	True	AATAAA	-12	NA	58183453	58213552	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_58183597_58183920_58183999_58185711_58185839_58186946_58187043_58206719_58207203_58209960_58210074_58211559_58211687_58212160
H1_mix_00048739	chr19	+	3290	7	NIC	ENSG00000198131.15	novel	3587	7	NA	NA	7	0	combination_of_known_junctions	TRUE	canonical	3	9	junction_3	78.8120126207505	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGAGTCTGCAGTTTCT	10	True	NA	NA	False	AATAAA	-18	NA	58228925	58263644	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_58228947_58229467_58229571_58230393_58230498_58243964_58244057_58246300_58246428_58246745_58246795_58260850
H1_mix_00048740	chr19	+	237	4	NIC	ENSG00000198131.15	novel	218	3	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_3	94.3409890886364	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTCCTGGTGTGTTTTTTG	15	True	NA	NA	False	ATTAAA	-32	NA	58228930	58231820	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_58228947_58229467_58229571_58230393_58230463_58231771
H1_mix_00048741	chr19	+	4839	6	NIC	ENSG00000198131.15	novel	3302	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_5	75.8999341238186	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGAGTCTGCAGTTTCT	384	False	NA	NA	False	AATAAA	-18	NA	58229470	58263644	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_58229571_58230393_58230463_58243964_58244057_58246300_58246428_58246710_58246795_58259277
H1_mix_00048742	chr19	+	3545	4	FSM	ENSG00000198131.15	ENST00000269829.5	3547	4	2	0	2	0	multi-exon	FALSE	canonical	3	81	junction_3	45.536310297998	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAATACAG	NA	False	NA	NA	False	NA	NA	NA	58243964	58264092	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_58244057_58246300_58246428_58246710_58246795_58260850
H1_mix_00048747	chr19	+	1203	7	FSM	ENSG00000083845.9	ENST00000601521.5	1203	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3116.77747129235	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGTTGTCTGTCTTCG	2835	False	NA	33	True	AATAAA	-33	NA	58386399	58394806	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_+_58386623_58387031_58387340_58388136_58388246_58392975_58393186_58393358_58393488_58394496_58394596_58394681
H1_mix_00048748	chr19	+	379	4	NIC	ENSG00000083845.9	novel	536	5	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	190	junction_2	3864.95194737988	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCTGTTGTCTGTCTT	6	False	NA	31	True	AATAAA	-31	NA	58387291	58394804	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_+_58387340_58388136_58388246_58394496_58394596_58394681
H1_mix_00048755	chr19	+	2952	17	NNC	ENSG00000130726.12	novel	3364	17	NA	NA	0	0	intron_retention	TRUE	canonical	1	61	junction_12	706.566079712294	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCAGGCGTTGGCTGGTTG	15	False	NA	34	True	AATAAA	-14	NA	58544472	58550715	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_+_58545098_58545424_58545538_58545763_58545897_58547375_58547512_58547596_58547714_58547791_58547907_58548033_58548181_58548293_58548409_58548485_58548593_58548739_58548777_58548861_58548911_58548987_58549241_58549333_58549651_58549736_58549861_58549948_58550036_58550146_58550285_58550376
H1_mix_00048757	chr19	-	1126	3	FSM	ENSG00000282591.1	ENST00000631376.1	1183	3	0	57	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTATAGTTGGTTACA	NA	False	NA	NA	False	AATAAA	-24	NA	77686	76219	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_76784_76885_77091_77329
H1_mix_00048758	chr19	-	5529	5	Fusion	ENSG00000282508.2_ENSG00000282416.1	novel	615	4	NA	NA	0	426	intron_retention	FALSE	canonical	1	2	junction_3	25.8215026673507	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGGGCAAAGGCAGGGTG	NA	False	NA	NA	False	AATGAA	-37	NA	205411	196883	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_-_201663_201755_201814_203874_204066_204817_205077_205169
H1_mix_00048759	chr19	-	3881	1	FSM	ENSG00000282416.1	ENST00000632679.1	757	1	-2722	-402	-2722	402	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATCAACGTGTTCTGTTCT	NA	False	NA	NA	False	AATGAA	-13	NA	200788	196907	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_196900_200800
H1_mix_00048761	chr19	-	2690	13	NIC	ENSG00000105556.12	novel	2769	14	NA	NA	1	2	intron_retention	FALSE	canonical	3	27	junction_12	65.4133757133984	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGTGGTGGATCGGGT	0	True	NA	-1	True	ATTAAA	-20	NA	344806	305570	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_306712_307118_307537_308576_308666_308800_308926_311844_311940_312190_312273_313491_313644_325634_325705_326506_326599_327132_327257_327863_327990_334399_334543_344773
H1_mix_00048762	chr19	-	563	5	FSM	ENSG00000105556.12	ENST00000592722.1	563	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	107.571778362171	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGAGGGCCCTTCCTG	4207	False	NA	NA	False	NA	NA	NA	340599	327863	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_327990_330263_330381_334399_334543_336082_336174_340513
H1_mix_00048763	chr19	-	2532	10	ISM	ENSG00000129946.11	ENST00000264554.11	2525	13	0	7322	0	-6711	5prime_fragment	FALSE	canonical	3	90	junction_5	14.1499901845274	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGCTCTGAGCTTCCCTC	-1	True	NA	NA	False	GGGGCT	-1	NA	461033	423910	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_425232_430683_430748_434708_434866_436164_436292_436379_436432_436629_436684_438717_438838_438969_439031_440861_440933_460528
H1_mix_00048765	chr19	-	861	1	FSM	ENSG00000272473.1	ENST00000606966.1	861	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGAGTCCCCTTTTTCT	784	False	NA	-2	True	AATAAA	-20	NA	781862	781001	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_781000_781900
H1_mix_00048768	chr19	-	1214	8	FSM	ENSG00000099817.12	ENST00000591767.5	1214	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1680.88871051681	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTCCAGCAGGTGGCCTT	20	True	NA	NA	False	AATAAA	-34	NA	1095336	1088147	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1088721_1089471_1089552_1089883_1089963_1090086_1090146_1090907_1090989_1091791_1091908_1093755_1093904_1095258
H1_mix_00048769	chr19	-	1649	4	NIC	ENSG00000130005.13	novel	1769	5	NA	NA	17	-11	intron_retention	FALSE	canonical	3	32	junction_2	183.144751494549	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTTCTTTTTCTGGT	4	True	NA	-13	True	NA	NA	NA	1401525	1397821	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_1399027_1399127_1399196_1399792_1399939_1401295
H1_mix_00048770	chr19	-	2331	1	FSM	ENSG00000119559.17	ENST00000592486.1	2314	1	0	-17	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTGAGCGGCTCCGTC	3064	False	NA	7	True	CATAAA	-33	NA	1476485	1474154	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1474200_1476500
H1_mix_00048771	chr19	-	2137	5	NIC	ENSG00000115257.15	novel	2661	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	19	junction_3	6.60965203320114	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTCTGTGGCCTCCTCT	6310	False	NA	-5	True	AATAAA	-17	NA	1484127	1481427	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_1482208_1482352_1483021_1483283_1483768_1483837_1483942_1484026
H1_mix_00048772	chr19	-	579	2	FSM	ENSG00000115257.15	ENST00000586002.3	545	2	0	-34	0	34	multi-exon	FALSE	canonical	3	21	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCATCCTGCCGCTGATCT	6310	False	NA	NA	False	NA	NA	NA	1484127	1483463	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1483942_1484026
H1_mix_00048775	chr19	-	2321	19	NIC	ENSG00000071564.17	novel	4735	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	395	junction_1	226.836490031645	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCGTGTCTCTCGCTATT	3973	False	NA	-37	True	TATAAA	-2	NA	1650287	1611055	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_1611370_1611703_1611850_1615284_1615521_1615685_1615822_1619110_1619235_1619315_1619475_1619779_1619854_1620967_1621047_1621132_1621192_1621837_1621971_1622053_1622224_1622312_1622416_1623950_1624001_1625575_1625709_1627358_1627427_1632037_1632117_1632331_1632406_1646354_1646428_1650176
H1_mix_00048776	chr19	-	2641	8	NIC	ENSG00000130270.16	novel	5095	29	NA	NA	0	202	combination_of_known_junctions	FALSE	canonical	3	19	junction_7	7.26748419541537	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTGGCCCCTCCCAAGA	28	False	NA	NA	False	ATTAAA	-24	NA	1790817	1781872	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_1783271_1784818_1784947_1785158_1785298_1785468_1785709_1787102_1787187_1788896_1789121_1789360_1789728_1790756
H1_mix_00048777	chr19	-	369	4	FSM	ENSG00000079313.15	ENST00000588743.2	369	4	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	4.98887651569859	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGACCTGGCCTGGTGCGG	8236	False	NA	NA	False	NA	NA	NA	1818735	1817178	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1817330_1817706_1817781_1818481_1818596_1818705
H1_mix_00048778	chr19	-	1781	6	FSM	ENSG00000129968.17	ENST00000676686.1	1781	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	320.672169044961	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGAGCCCTTAGGGAGCT	0	True	NA	NA	False	NA	NA	NA	1885496	1876809	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1877426_1877507_1877688_1879920_1880116_1881234_1881805_1884468_1884544_1885351
H1_mix_00048779	chr19	-	951	1	FSM	ENSG00000133243.10	ENST00000611545.1	951	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGCTCTTGCTTAGCTGAA	7043	False	NA	NA	False	GGGGCT	-43	NA	1990370	1989419	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_1989400_1990400
H1_mix_00048780	chr19	-	5045	33	NNC	ENSG00000065000.19	novel	5065	32	NA	NA	0	45817	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	82.1085409686471	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAACTCAGTCCTGCCTG	-11	True	NA	NA	False	NA	NA	NA	2151566	2055170	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_2055193_2100993_2102269_2108686_2108767_2109085_2109208_2109872_2109959_2110135_2110225_2110706_2110897_2111284_2111333_2111678_2111829_2112859_2112932_2113335_2113414_2114124_2114303_2114747_2114822_2115218_2115419_2115537_2115614_2116206_2116279_2116604_2116747_2117221_2117368_2118600_2118833_2120861_2121093_2121162_2121312_2121733_2121880_2123357_2123407_2123829_2123880_2127151_2127202_2129089_2129164_2129317_2129458_2130407_2130538_2132470_2132579_2137010_2137092_2137726_2137808_2138618_2138715_2151238
H1_mix_00048783	chr19	-	2859	3	FSM	ENSG00000104886.12	ENST00000588450.1	2858	3	0	-1	0	0	multi-exon	FALSE	canonical	3	1595	junction_2	94.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGATGGCGGTGAAGTGAA	4	True	NA	-5	True	AATAAA	-18	NA	2236263	2233152	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2234062_2234149_2235991_2236154
H1_mix_00048784	chr19	-	1329	6	FSM	ENSG00000104886.12	ENST00000589791.5	1329	6	0	0	0	0	multi-exon	FALSE	canonical	2	52	junction_5	687.251453254193	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGATGGCGGTGAAGTG	3	True	NA	-7	True	AATAAA	-16	NA	2236665	2233154	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2233906_2233997_2234062_2234149_2234241_2235761_2235829_2235922_2235991_2236377
H1_mix_00048786	chr19	-	1085	7	FSM	ENSG00000167476.10	ENST00000300961.10	1138	7	14	39	14	-39	multi-exon	FALSE	canonical	1	1	junction_6	2.60874597374975	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCGCGACTCTGGCGAAA	32	False	NA	NA	False	NA	NA	NA	2256403	2252290	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_2252797_2252911_2253004_2253619_2253794_2254186_2254302_2254444_2254483_2255205_2255345_2256382
H1_mix_00048787	chr19	-	494	4	NNC	ENSG00000130332.15	novel	621	4	NA	NA	0	12194	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1827.92584337792	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGTAAAAAACTTTCCATGA	3964	False	NA	NA	False	AAAAAG	-11	NA	2328477	2309325	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_2309359_2321520_2321823_2324124_2324193_2328386
H1_mix_00048788	chr19	-	717	4	NNC	ENSG00000099800.8	novel	1664	3	NA	NA	0	51378	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2020.24624461695	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTGAGAGAAATCAGCAT	9609	False	NA	NA	False	AAAAAG	-2	NA	2427538	2374246	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_2374286_2426562_2427047_2427255_2427325_2427413
H1_mix_00048789	chr19	-	4671	13	NNC	ENSG00000176619.13	novel	4634	12	NA	NA	0	53391	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	362.545016361953	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTGAGAGAAATCAGCAT	-5	True	NA	NA	False	AAAAAG	-2	NA	2456959	2374246	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_2374284_2428165_2430953_2431547_2431659_2431782_2431903_2432415_2432524_2433825_2434106_2434294_2434516_2434787_2434914_2435000_2435172_2438162_2438289_2438374_2438532_2444403_2444541_2456669
H1_mix_00048790	chr19	-	4672	13	NNC	ENSG00000176619.13	novel	4634	12	NA	NA	0	53391	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	362.545016361953	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTGAGAGAAATCAGCAT	-5	True	NA	NA	False	AAAAAG	-2	NA	2456959	2374246	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_2374285_2428165_2430953_2431547_2431659_2431782_2431903_2432415_2432524_2433825_2434106_2434294_2434516_2434787_2434914_2435000_2435172_2438162_2438289_2438374_2438532_2444403_2444541_2456669
H1_mix_00048791	chr19	-	4616	12	NNC	ENSG00000176619.13	novel	4634	12	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	2	80	junction_8	355.698916231501	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTGCCTCTGAGTTTAT	10	True	NA	-6	True	AATAAA	-14	NA	2456944	2428165	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_2430953_2431547_2431659_2431782_2431903_2432415_2432524_2433825_2434106_2434294_2434516_2434787_2434914_2435000_2435169_2438162_2438289_2438374_2438532_2444403_2444541_2456669
H1_mix_00048793	chr19	-	996	5	NNC	ENSG00000065717.15	novel	2812	20	NA	NA	2818	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	88.6661575799922	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGCACTTCTCTCTCGGGC	NA	False	NA	-25	True	AATAAA	-15	NA	3006058	2997643	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_2997956_3000646_3000724_3002352_3002474_3005436_3005585_3005720
H1_mix_00048794	chr19	-	2741	19	NNC	ENSG00000065717.15	novel	2812	20	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_12	59.6259171837214	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGCACTTCTCTCTCGGGC	6361	False	3029299	-25	True	AATAAA	-15	NA	3029262	2997643	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_2997956_3000646_3000724_3002352_3002504_3005436_3005585_3005720_3005969_3006419_3006670_3008868_3008946_3009577_3009703_3011021_3011161_3013668_3013819_3014569_3014615_3015652_3015761_3019282_3019467_3019698_3019774_3025019_3025083_3027828_3027874_3028318_3028383_3028705_3028804_3028880
H1_mix_00048796	chr19	-	824	4	NIC	ENSG00000095932.7	novel	1312	4	NA	NA	30	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	4.24264068711928	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATGTCTACTGAACAGAA	3104	False	NA	-120	True	NA	NA	NA	3480492	3474507	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_3474997_3478418_3478479_3478817_3478997_3480396
H1_mix_00048797	chr19	-	1757	5	FSM	ENSG00000129932.10	ENST00000672935.1	1757	5	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_4	130.511254303987	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACTCCTCTGAGTGTGTT	12	True	NA	-5	True	ATTAAA	-17	NA	3500637	3490820	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3491812_3492261_3492500_3494027_3494105_3496540_3496887_3500532
H1_mix_00048799	chr19	-	5240	3	NNC	ENSG00000186111.11	novel	5069	18	NA	NA	13567	2	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	47	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGTTTGCCTTTCTGTG	8223	False	NA	34	True	AATAAA	-17	NA	3635862	3630180	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_3633170_3633436_3633521_3633695
H1_mix_00048801	chr19	-	801	8	FSM	ENSG00000007264.15	ENST00000590493.5	801	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	60.5013071203037	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCCGCCCGCAACATCCT	2237	False	NA	NA	False	NA	NA	NA	3784152	3779132	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3779188_3779377_3779452_3779532_3779618_3779697_3779798_3781606_3781673_3783125_3783298_3783813_3784034_3784123
H1_mix_00048802	chr19	-	715	4	FSM	ENSG00000105278.12	ENST00000674260.1	715	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	34.4512538072113	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCAGGAGAGCCATCCAG	61	False	NA	NA	False	NA	NA	NA	3868993	3852255	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3852615_3853391_3853424_3855401_3855697_3868964
H1_mix_00048803	chr19	-	976	2	FSM	ENSG00000167658.16	ENST00000594885.1	580	2	-237	-159	-237	159	multi-exon	FALSE	canonical	3	6813	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTACATTGGTGAGGGACT	4621	False	NA	NA	False	NA	NA	NA	3985700	3983697	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_3984351_3985377
H1_mix_00048804	chr19	-	1360	7	FSM	ENSG00000077463.15	ENST00000601488.5	1361	7	0	1	0	0	multi-exon	FALSE	canonical	3	10	junction_5	29.9091216112335	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAGTGTGTTTACTTTA	11	True	NA	-5	True	AATAAA	-18	NA	4182547	4174109	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4174947_4175027_4175112_4175679_4175761_4175841_4175938_4177078_4177139_4180781_4180910_4182473
H1_mix_00048805	chr19	-	1531	8	NIC	ENSG00000077463.15	novel	1600	8	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	22.4862769942297	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTCAGTGTGTTTACTT	21	False	NA	-7	True	AATAAA	-16	NA	4182537	4174111	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_4174947_4175027_4175112_4175679_4175761_4175841_4175938_4177078_4177139_4179103_4179287_4180781_4180910_4182473
H1_mix_00048806	chr19	-	564	1	FSM	ENSG00000280247.1	ENST00000622962.1	1020	1	188	268	188	-268	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTCCCTCCATTGCCCA	NA	False	NA	NA	False	NA	NA	NA	4247170	4246606	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4246600_4247200
H1_mix_00048807	chr19	-	1177	5	FSM	ENSG00000167664.8	ENST00000595645.5	1212	5	14	21	6	-21	multi-exon	TRUE	canonical	1	1	junction_4	1.92028643696715	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGGCTTGTGAAGAAAA	14	True	NA	NA	False	NA	NA	NA	4302379	4292252	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4292886_4294578_4294681_4294774_4294817_4297985_4298346_4302339
H1_mix_00048808	chr19	-	1812	1	FSM	ENSG00000269318.1	ENST00000593524.1	1812	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAGCAACTGGCACTTAT	3139	False	NA	NA	False	AAGAAA	-16	NA	4358448	4356636	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4356600_4358400
H1_mix_00048809	chr19	-	3853	19	FSM	ENSG00000142002.18	ENST00000594671.5	3851	19	0	-2	0	2	multi-exon	TRUE	canonical	1	2	junction_1	29.4853489460297	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGAGGTTCCTTCTAAG	9494	False	NA	-2	True	ATTAAA	-26	NA	4714306	4675221	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4676576_4679834_4679947_4682695_4682839_4683476_4683630_4684662_4684810_4685625_4685772_4688756_4688893_4689569_4689723_4690877_4690958_4694660_4694824_4695377_4695556_4697550_4697652_4700215_4700278_4702026_4702156_4702602_4702717_4703885_4704055_4704130_4704305_4705857_4705971_4714080
H1_mix_00048810	chr19	-	748	6	FSM	ENSG00000142002.18	ENST00000646573.1	748	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	37.3234510730184	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGTGGCTGTTGGGGGCT	8868	False	NA	NA	False	NA	NA	NA	4685683	4679834	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_4679947_4682695_4682839_4683189_4683325_4683476_4683630_4684662_4684810_4685625
H1_mix_00048812	chr19	-	5138	28	NIC	ENSG00000105426.18	novel	7356	38	NA	NA	27	59	combination_of_known_splicesites	FALSE	canonical	2	11	junction_18	57.22717226582	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCCGTGACATTTCATTT	54	False	NA	NA	False	TTTAAA	-17	NA	5293225	5206308	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_5206843_5207921_5208058_5208236_5208392_5210468_5210595_5210678_5210806_5211589_5211769_5211964_5212251_5212336_5212492_5214360_5214481_5214560_5214737_5215288_5215413_5215497_5215596_5218419_5218533_5219309_5219468_5219938_5220155_5220259_5220354_5220999_5221254_5222122_5222221_5238918_5239064_5240198_5240333_5243900_5244483_5245775_5246046_5258016_5258128_5265007_5265197_5273441_5273584_5274198_5274345_5286049_5286235_5293140
H1_mix_00048813	chr19	-	6371	32	NIC	ENSG00000105426.18	novel	7356	38	NA	NA	21	59	combination_of_known_splicesites	FALSE	canonical	3	24	junction_31	46.4311783009899	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCCGTGACATTTCATTT	48	False	NA	NA	False	TTTAAA	-17	NA	5293231	5206308	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_5206843_5207921_5208058_5208236_5208392_5210468_5210595_5210678_5210806_5211589_5211769_5211964_5212251_5212336_5212492_5214360_5214481_5214560_5214737_5215288_5215413_5215497_5215596_5218419_5218533_5219309_5219468_5219938_5220155_5220259_5220354_5220999_5221254_5222122_5222221_5222688_5223298_5225726_5225845_5229490_5229685_5231309_5231616_5238918_5239064_5240198_5240333_5243900_5244483_5245775_5246046_5258016_5258128_5265007_5265197_5273441_5273584_5274198_5274345_5286049_5286235_5293140
H1_mix_00048814	chr19	-	6486	32	NIC	ENSG00000105426.18	novel	7356	38	NA	NA	-57	59	combination_of_known_splicesites	FALSE	canonical	3	48	junction_13	38.2685075232117	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCCGTGACATTTCATTT	NA	False	NA	NA	False	TTTAAA	-17	NA	5340869	5206308	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_5206843_5207921_5208058_5208236_5208392_5210468_5210595_5210678_5210806_5211589_5211769_5211964_5212251_5212336_5212492_5214360_5214481_5214560_5214737_5215288_5215413_5215497_5215596_5218419_5218533_5219309_5219468_5219938_5220155_5220259_5220354_5220999_5221254_5222122_5222221_5222688_5223298_5225726_5225845_5229490_5229685_5231309_5231616_5238918_5239064_5240198_5240333_5243900_5244483_5245775_5246046_5258016_5258128_5265007_5265197_5273441_5273584_5274198_5274345_5286049_5286235_5340663
H1_mix_00048815	chr19	-	603	2	FSM	ENSG00000223573.7	ENST00000646160.1	603	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCCTGCTTTCTCTCTTTC	5	True	NA	NA	False	AATAAA	-23	NA	5567953	5562635	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5562950_5567664
H1_mix_00048816	chr19	-	3155	21	NNC	ENSG00000130254.12	novel	3167	21	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	61.8542642022359	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGCGTGCGCGTGCACA	3720	False	NA	-19	True	AATAAA	-15	NA	5622759	5586998	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_5587400_5587695_5587768_5587867_5587981_5590277_5590409_5591747_5591794_5592746_5592888_5593890_5594179_5595360_5595498_5598792_5598885_5600129_5600261_5604582_5604696_5604786_5604937_5609994_5610096_5610638_5610689_5611119_5611631_5612539_5612568_5613464_5613528_5616131_5616336_5616421_5616487_5621308_5621397_5622529
H1_mix_00048818	chr19	-	833	2	FSM	ENSG00000141994.16	ENST00000590343.1	833	2	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCCAACACCCAGAACCCC	5462	False	NA	NA	False	NA	NA	NA	5785755	5784831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5785512_5785602
H1_mix_00048821	chr19	-	728	1	FSM	ENSG00000130383.7	ENST00000252675.6	1916	1	556	632	556	-632	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACCTGCTGGAGTCTTTG	NA	False	NA	NA	False	NA	NA	NA	5867185	5866457	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_5866500_5867200
H1_mix_00048823	chr19	-	3491	11	NNC	ENSG00000125648.15	novel	3482	10	NA	NA	0	44639	intron_retention	TRUE	non_canonical	0	0	junction_1	109.441354158289	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGAAATGGCAAAGGCCCAG	9	True	NA	NA	False	NA	NA	NA	6459770	6391439	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_6391472_6440064_6442160_6444150_6444302_6452311_6452480_6453980_6454089_6454322_6454476_6454558_6454718_6456419_6456532_6457502_6457591_6458197_6458325_6459472
H1_mix_00048825	chr19	-	1726	10	NIC	ENSG00000125648.15	novel	2056	13	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	106.84025227494	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATTTTGTCAGGTTTTT	63	False	NA	-4	True	AATACA	-17	NA	6459748	6436080	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_6436465_6444150_6444302_6452311_6452480_6453980_6454089_6454322_6454476_6454558_6454718_6456419_6456532_6457502_6457591_6458197_6458325_6459472
H1_mix_00048826	chr19	-	1811	11	NIC	ENSG00000125648.15	novel	2056	13	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	133.746813046143	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATATGATTTTGTCAGG	61	False	NA	-9	True	AATACA	-12	NA	6459750	6436085	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_6436465_6438446_6438535_6444150_6444302_6452311_6452480_6453980_6454089_6454322_6454476_6454558_6454718_6456419_6456532_6457502_6457591_6458197_6458325_6459472
H1_mix_00048827	chr19	-	3329	9	NIC	ENSG00000125648.15	novel	3482	10	NA	NA	3	-1	intron_retention	FALSE	canonical	3	4	junction_3	119.675015667432	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGTGGTTTTTACTGAA	63	False	NA	-4	True	AATAAA	-15	NA	6459748	6440064	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_6442160_6444150_6444302_6452311_6452480_6454322_6454476_6454558_6454718_6456419_6456532_6457502_6457591_6458197_6458325_6459472
H1_mix_00048830	chr19	-	2423	12	FSM	ENSG00000205744.10	ENST00000590818.5	2422	12	0	-1	0	0	multi-exon	FALSE	canonical	1	1	junction_11	11.1258763235505	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACTAATTTTATATAAATA	5569	False	NA	-5	True	AATAAA	-18	NA	6476215	6467206	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_6468119_6468233_6468442_6468577_6468646_6468845_6468954_6469595_6469641_6470294_6470367_6471264_6471306_6471405_6471497_6472888_6472994_6475273_6475400_6475483_6475752_6475836
H1_mix_00048832	chr19	-	2063	8	Fusion	ENSG00000125735.11_ENSG00000125726.11	novel	572	4	NA	NA	8487	2	multi-exon	TRUE	canonical	1	5	junction_4	4.27140468220744	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTCGTGGCGTGCATC	8877	False	NA	-4	True	ATTAAA	-17	NA	6661630	6585836	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_-_6586406_6590102_6590137_6590840_6591056_6592415_6592576_6593576_6594009_6623561_6623723_6661008_6661223_6661352
H1_mix_00048833	chr19	-	4976	39	ISM	ENSG00000125730.17	ENST00000245907.11	5231	41	2034	131	2034	0	3prime_fragment	TRUE	canonical	0	0	junction_34	15.4203340949899	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTCTGGAGTTCTTTGCC	2063	False	NA	-1	True	GATAAA	-18	NA	6718616	6677834	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_6678024_6678151_6678288_6678371_6678456_6679124_6679209_6679406_6679497_6680157_6680264_6681940_6682031_6682141_6682230_6684387_6684440_6684559_6684651_6684774_6684835_6684987_6685147_6686123_6686288_6686745_6686903_6690628_6690728_6692923_6693084_6693411_6693488_6694430_6694635_6696378_6696466_6696592_6696660_6697343_6697557_6697651_6697795_6702126_6702213_6702470_6702580_6707075_6707274_6707465_6707538_6707799_6707930_6709683_6709843_6710638_6710846_6710986_6711197_6712256_6712407_6712507_6712624_6713188_6713316_6713406_6713510_6713991_6714083_6714165_6714249_6714351_6714447_6718093_6718165_6718246
H1_mix_00048834	chr19	-	619	5	FSM	ENSG00000125734.16	ENST00000537722.8	619	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	106.234116459827	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCGTTGTCTTGCCTTTTT	5535	False	NA	-4	True	NA	NA	NA	6732054	6730054	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_6730385_6730986_6731112_6731198_6731283_6731472_6731523_6732024
H1_mix_00048837	chr19	-	2299	10	NNC	ENSG00000125731.13	novel	2281	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_4	27.1502449799101	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTTGAGGCTGTGTAC	9	True	NA	-6	True	AATAAA	-17	NA	6767435	6752164	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_6752754_6753455_6753642_6754051_6754164_6754250_6754449_6754615_6754732_6754830_6755316_6759593_6759671_6760637_6760988_6763679_6763817_6767386
H1_mix_00048839	chr19	-	1020	5	ISM	ENSG00000182566.15	ENST00000328853.11	1299	9	1239	0	1239	0	3prime_fragment	FALSE	canonical	2	4	junction_3	3.64005494464026	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGCTCTGGCGAGATCT	7912	False	NA	NA	False	AATAAA	-23	NA	7730871	7728956	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_7729505_7729820_7729937_7730018_7730168_7730350_7730441_7730754
H1_mix_00048840	chr19	-	488	1	FSM	ENSG00000260500.1	ENST00000564226.1	506	1	-29	47	-29	-47	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAATCCAAGCTCCACCCAG	9726	False	NA	NA	False	NA	NA	NA	7919186	7918698	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_7918700_7919200
H1_mix_00048842	chr19	-	9236	63	FSM	ENSG00000142449.13	ENST00000270509.6	9232	63	0	-4	0	3	multi-exon	TRUE	canonical	3	26	junction_59	34.5208468286169	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCCCTTTGGCAAGTT	1828	False	NA	-4	True	AATAAA	-19	NA	8147766	8065398	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8066261_8072047_8072199_8073062_8073298_8075070_8075191_8075282_8075412_8081002_8081120_8081357_8081481_8083246_8083373_8085362_8085570_8086199_8086326_8087076_8087212_8087824_8087948_8088059_8088180_8089544_8089671_8089893_8089960_8090098_8090252_8091464_8091591_8094445_8094566_8095374_8095504_8095963_8096081_8096443_8096570_8096880_8097007_8097288_8097415_8100900_8100973_8102723_8102874_8103561_8103688_8106107_8106234_8108169_8108239_8109226_8109389_8109630_8109754_8110844_8110968_8111057_8111184_8111647_8111771_8111976_8112100_8115514_8115641_8116673_8116800_8117168_8117292_8117463_8117590_8118896_8119023_8121257_8121387_8123463_8123590_8123783_8124009_8125891_8126018_8126296_8126348_8126467_8126606_8126712_8126833_8129027_8129154_8129239_8129366_8131234_8131289_8131553_8131830_8132983_8133107_8135960_8136087_8136189_8136310_8136387_8136532_8138140_8138324_8138411_8138565_8141716_8141843_8141939_8142138_8144876_8144973_8145842_8145939_8146126_8146226_8147103_8147187_8147313
H1_mix_00048843	chr19	-	8678	61	NIC	ENSG00000142449.13	novel	9108	64	NA	NA	113	1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_57	36.4425880285995	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTGCCCTTTGGCAAG	115	False	NA	-6	True	AATAAA	-17	NA	8149479	8065400	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_8066261_8072047_8072199_8073062_8073298_8075070_8075191_8075282_8075412_8081002_8081120_8081357_8081481_8083246_8083373_8085362_8085570_8086199_8086326_8087076_8087212_8087824_8087948_8088059_8088180_8089544_8089671_8089893_8089960_8090098_8090252_8091464_8091591_8094445_8094566_8095374_8095504_8095963_8096081_8096880_8097007_8097288_8097415_8100900_8100973_8102723_8102874_8103561_8103688_8106107_8106234_8108169_8108239_8109226_8109389_8109630_8109754_8110844_8110968_8111057_8111184_8111647_8111771_8111976_8112100_8115514_8115641_8116673_8116800_8117168_8117292_8117463_8117590_8118896_8119023_8121257_8121387_8123463_8123590_8123783_8124009_8125891_8126018_8126296_8126348_8126467_8126606_8126712_8126833_8129027_8129154_8129239_8129366_8131234_8131289_8131553_8131830_8132983_8133107_8135960_8136087_8136189_8136310_8136387_8136532_8138140_8138324_8138411_8138565_8141716_8141843_8141939_8142138_8146126_8146226_8147103_8147187_8147313_8147498_8149448
H1_mix_00048844	chr19	-	8740	61	NIC	ENSG00000142449.13	novel	9086	64	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	37.4081504785016	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCCTGCCCTTTGGCAA	727	False	NA	-7	True	AATAAA	-16	NA	8148867	8065401	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_8066261_8072047_8072199_8073062_8073298_8075070_8075191_8075282_8075412_8081002_8081120_8081357_8081481_8083246_8083373_8085362_8085570_8086199_8086326_8087076_8087212_8087824_8087948_8088059_8088180_8091464_8091591_8094445_8094566_8095374_8095504_8095963_8096081_8096443_8096570_8096880_8097007_8097288_8097415_8100900_8100973_8102723_8102874_8103561_8103688_8106107_8106234_8108169_8108239_8109226_8109389_8109630_8109754_8110844_8110968_8111057_8111184_8111647_8111771_8111976_8112100_8115514_8115641_8116673_8116800_8117168_8117292_8117463_8117590_8118896_8119023_8121257_8121387_8123463_8123590_8123783_8124009_8125891_8126018_8126296_8126348_8126467_8126606_8126712_8126833_8129027_8129154_8129239_8129366_8131234_8131289_8131553_8131830_8132983_8133107_8135960_8136087_8136189_8136310_8136387_8136532_8138140_8138324_8138411_8138565_8141716_8141843_8141939_8142138_8144876_8144973_8145842_8145939_8146126_8146226_8147103_8147187_8147313_8147498_8148746
H1_mix_00048845	chr19	-	1727	5	FSM	ENSG00000167775.11	ENST00000596002.5	1729	5	0	2	0	-2	multi-exon	FALSE	canonical	1	2	junction_4	701.918086389003	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGCCTGCCTCTGGGTCTC	34	True	NA	-8	True	ATTAAA	-15	NA	8308300	8302128	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8302606_8302776_8302981_8303854_8303974_8305030_8305806_8308148
H1_mix_00048847	chr19	-	643	1	FSM	ENSG00000279827.1	ENST00000623944.1	1028	1	332	53	332	-53	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCTTGTTCAACCCGCGG	285	False	NA	-56	True	NA	NA	NA	8445265	8444622	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8444600_8445300
H1_mix_00048848	chr19	-	253	2	FSM	ENSG00000142347.19	ENST00000596245.1	507	2	1	253	1	-253	multi-exon	FALSE	canonical	3	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGAGCTGCGTCCCTTG	NA	False	NA	NA	False	NA	NA	NA	8526621	8525478	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8525563_8526452
H1_mix_00048849	chr19	-	872	2	FSM	ENSG00000142347.19	ENST00000595191.1	872	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGTGCTATTGTATTCCA	4718	False	NA	NA	False	NA	NA	NA	8550656	8549579	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8550357_8550561
H1_mix_00048850	chr19	-	765	7	FSM	ENSG00000142347.19	ENST00000595325.5	1132	7	0	367	0	-203	multi-exon	FALSE	canonical	2	3	junction_5	1.24721912892465	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCAGGGAAGGGGCCGGGG	-1	True	NA	NA	False	AATGAA	-31	NA	8577438	8552032	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8552165_8553138_8553229_8553349_8553438_8554476_8554572_8554653_8554744_8555658_8555797_8577306
H1_mix_00048852	chr19	-	2460	13	FSM	ENSG00000142303.14	ENST00000595838.5	2458	13	0	-2	0	0	multi-exon	FALSE	canonical	2	4	junction_10	7.77102881791651	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCGGTGTGTGTGTGTCAG	NA	False	NA	1	True	AATAAA	-28	NA	8592196	8580239	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_8581003_8584894_8585055_8585131_8585309_8585455_8585661_8586121_8586252_8586343_8586471_8586557_8586722_8586815_8586897_8589241_8589366_8589451_8589575_8589888_8589992_8591799_8591864_8591957
H1_mix_00048858	chr19	-	3666	12	FSM	ENSG00000174652.20	ENST00000651268.1	3653	12	0	-13	0	0	multi-exon	FALSE	canonical	2	2	junction_8	22.9678179450514	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCAGTCTGTTATTTTG	-5	True	NA	-6	True	AATAAA	-16	NA	9435571	9412597	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9414721_9415653_9415743_9417827_9417909_9418504_9418632_9418765_9418896_9419050_9419300_9420064_9420219_9433667_9433784_9434074_9434236_9434797_9434860_9435107_9435194_9435283
H1_mix_00048861	chr19	-	1560	3	NNC	ENSG00000197961.12	novel	6987	4	NA	NA	4715	85506	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	227	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGCATGGTGGTGCATG	2323	False	NA	NA	False	NA	NA	NA	9563028	9474822	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_9474848_9560328_9561627_9562791
H1_mix_00048862	chr19	-	7320	7	ISM	ENSG00000130818.12	ENST00000253115.7	7104	8	14	-1	14	1	intron_retention	FALSE	canonical	3	14	junction_2	7.56453714527348	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAATGTGTGGGGTTCCTTT	8	True	NA	-24	True	AATAAA	-20	NA	9538631	9523221	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_9529637_9530984_9531068_9532844_9532926_9533839_9533967_9535187_9535280_9536207_9536357_9538258
H1_mix_00048863	chr19	-	4879	7	NIC	ENSG00000171469.11	novel	659	7	NA	NA	0	7	intron_retention	TRUE	canonical	0	0	junction_6	58.9305146384753	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCATGTCTATAGTTCTAG	602	False	NA	-5	True	AATAAA	-24	NA	9621188	9607318	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_9611337_9614020_9614104_9617044_9617172_9617620_9617759_9618090_9618180_9619431_9619583_9620915
H1_mix_00048864	chr19	-	4426	5	FSM	ENSG00000171469.11	ENST00000424629.5	4419	5	0	-7	0	7	multi-exon	FALSE	canonical	0	0	junction_3	56.1977535138194	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCATGTCTATAGTTCTAG	9	True	NA	-5	True	AATAAA	-24	NA	9621208	9607318	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9611337_9614020_9614104_9617044_9617172_9619431_9619583_9621161
H1_mix_00048865	chr19	-	2656	1	ISM	ENSG00000171466.10	ENST00000453372.7	12639	6	24134	6504	24082	4402	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAATTAAATAAATGTGG	NA	False	NA	NA	False	AATAAA	-4	NA	9650966	9648310	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_9648300_9651000
H1_mix_00048866	chr19	-	588	1	FSM	ENSG00000239830.1	ENST00000480755.1	780	1	-2	194	-2	-194	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCACCCTCGATCTTTCAAA	20	False	NA	NA	False	NA	NA	NA	9684075	9683487	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9683500_9684100
H1_mix_00048867	chr19	-	427	1	FSM	ENSG00000267370.1	ENST00000588113.1	712	1	-84	369	-84	-369	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTCAACATGCGTTGGAG	NA	False	NA	NA	False	NA	NA	NA	9756947	9756520	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9756500_9756900
H1_mix_00048868	chr19	-	2016	6	FSM	ENSG00000196605.7	ENST00000397902.6	2016	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	6.43739077577243	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTCCTCAGATCTTAGT	91	False	NA	NA	False	NA	NA	NA	9768617	9757474	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_9758765_9759859_9759943_9762081_9762169_9763281_9763409_9764935_9765036_9768288
H1_mix_00048869	chr19	-	562	7	FSM	ENSG00000130811.12	ENST00000587993.5	555	7	0	-7	0	0	multi-exon	FALSE	canonical	3	14	junction_5	720.712533230522	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGTGTCCTGCCGCATCTG	-4	True	NA	NA	False	NA	NA	NA	10119878	10116935	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10116990_10117083_10117189_10118667_10118728_10118867_10118957_10119087_10119256_10119653_10119701_10119839
H1_mix_00048871	chr19	-	5213	40	NIC	ENSG00000130816.17	novel	5408	40	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	97	junction_4	118.079320112644	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCCTGGGTGGGTATTCG	3	True	NA	39	True	AATAAA	-14	NA	10194934	10133348	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_10133702_10134216_10134308_10135735_10135853_10136120_10136288_10137075_10137281_10137831_10138010_10138438_10138606_10139675_10139818_10140045_10140329_10140780_10140910_10141104_10141190_10142027_10142221_10143765_10143988_10146350_10146525_10148883_10149018_10149452_10149658_10149852_10149969_10151397_10151546_10151749_10151848_10154292_10154480_10154585_10154774_10154904_10155057_10155852_10155946_10156390_10156510_10159657_10159768_10159841_10159923_10160017_10160064_10160383_10160419_10162666_10162749_10163325_10163361_10166597_10166686_10168329_10168365_10173089_10173175_10173870_10173906_10175539_10175619_10177291_10177368_10180349_10180570_10180777_10180886_10182040_10182078_10194819
H1_mix_00048872	chr19	-	2667	9	NIC	ENSG00000167807.15	novel	1956	11	NA	NA	13	629	intron_retention	FALSE	canonical	3	24	junction_4	202.270085529225	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGTGATTTGGGATCCC	11	True	NA	4	True	AATAAA	-25	NA	10315996	10304797	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_10305209_10305389_10305484_10305845_10305953_10308184_10308551_10309348_10310643_10310852_10310941_10315385_10315493_10315704_10315760_10315851
H1_mix_00048873	chr19	-	2569	10	NIC	ENSG00000167807.15	novel	1956	11	NA	NA	3	629	intron_retention	FALSE	canonical	3	13	junction_5	201.215258484325	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGTGATTTGGGATCCC	1	True	NA	4	True	AATAAA	-25	NA	10316006	10304797	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_10305209_10305389_10305484_10305845_10305953_10308184_10308551_10309348_10309449_10309556_10310643_10310852_10310941_10315385_10315493_10315704_10315760_10315851
H1_mix_00048874	chr19	-	4064	24	NIC	ENSG00000105397.14	novel	4243	25	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	19	junction_4	11.9596043457073	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCCTGTGATTTTTGGAG	-11	True	NA	-9	True	AATAAA	-18	NA	10380510	10350530	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_10350969_10351051_10351163_10352433_10352552_10352925_10353099_10354041_10354235_10354511_10354610_10356567_10356719_10357763_10357919_10358002_10358139_10359174_10359303_10361510_10361599_10361769_10361956_10362077_10362182_10362263_10362457_10362548_10362658_10364613_10364772_10364850_10365049_10365516_10365899_10366416_10366581_10368054_10368203_10368294_10368419_10378213_10378427_10379614_10379780_10380379
H1_mix_00048875	chr19	-	1389	8	FSM	ENSG00000105401.9	ENST00000593124.1	1389	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	745.813813828867	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGGGCTCCCCGGCCCAG	8	True	NA	NA	False	NA	NA	NA	10420121	10393259	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_10393442_10395020_10395144_10395227_10395344_10395434_10395697_10395927_10396204_10403377_10403596_10419460_10419598_10420046
H1_mix_00048878	chr19	-	5221	15	NNC	ENSG00000197256.11	novel	5183	13	NA	NA	0	30402	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	66.6106567437729	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAAGAAGCGCGCGAACA	11	True	NA	NA	False	NA	NA	NA	11197530	11133867	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_11133884_11164270_11164711_11164738_11166612_11169876_11169967_11170047_11170249_11172980_11173124_11174472_11174693_11175901_11175990_11176577_11176818_11178344_11178448_11178552_11178721_11192830_11194043_11194474_11194591_11195555_11195821_11197484
H1_mix_00048879	chr19	-	1291	4	NIC	ENSG00000161888.12	novel	833	5	NA	NA	37	-5	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	13.2748718344933	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAGTCCAGGGCCGGCCA	9192	False	NA	-19	True	AATAAA	-18	NA	11155724	11145497	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_11146431_11148012_11148118_11149093_11149239_11155616
H1_mix_00048881	chr19	-	5442	13	NIC	ENSG00000197256.11	novel	3048	13	NA	NA	0	15	combination_of_known_junctions	FALSE	canonical	1	2	junction_12	53.1467439161506	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTTCGCTGTGCTCCC	7308	False	NA	NA	False	AATAAA	-33	NA	11196227	11164254	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_11166612_11169876_11169967_11170047_11170249_11172980_11173124_11174472_11174693_11175901_11175990_11176577_11176818_11178344_11178448_11178552_11178721_11192830_11194043_11194474_11194591_11195555_11195882_11196049
H1_mix_00048882	chr19	-	4311	26	NIC	ENSG00000130158.14	novel	6430	48	NA	NA	-657	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	35.5508874713417	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCCATGTGGTGCGGT	8272	False	NA	-7	True	TTTAAA	-18	NA	11229989	11199294	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_11199540_11200307_11200470_11200715_11200823_11200908_11201053_11201888_11202126_11202393_11202484_11202583_11202716_11204199_11204332_11208685_11208830_11208910_11209104_11211775_11211877_11211992_11212152_11213175_11213329_11214274_11214410_11214552_11214650_11215386_11215472_11215800_11215928_11216913_11217097_11217230_11217392_11221850_11222021_11222108_11222249_11222734_11222906_11222992_11223107_11227336_11227478_11228939_11229036_11229297
H1_mix_00048883	chr19	-	4138	29	NIC	ENSG00000130158.14	novel	4009	30	NA	NA	64	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	40.4372151284796	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCCATGTGGTGCGGT	1828	False	NA	-7	True	TTTAAA	-18	NA	11236433	11199294	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_11199540_11200307_11200470_11200715_11200823_11200908_11201053_11201888_11202126_11202393_11202484_11202583_11202716_11204199_11204332_11208685_11208830_11208910_11209104_11211775_11211877_11211992_11212152_11213175_11213329_11214274_11214410_11214552_11214650_11215386_11215472_11215800_11215928_11216913_11217097_11217230_11217392_11221850_11222021_11222108_11222249_11222734_11222906_11222992_11223107_11227336_11227478_11228939_11229036_11232184_11232290_11233202_11233367_11235597_11235760_11236345
H1_mix_00048884	chr19	-	6492	49	NIC	ENSG00000130158.14	novel	6430	48	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_26	35.100945697928	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCCATGTGGTGCGGT	-6	True	NA	-7	True	TTTAAA	-18	NA	11262481	11199294	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_11199540_11200307_11200470_11200715_11200823_11200908_11201053_11201888_11202126_11202393_11202484_11202583_11202710_11204080_11204096_11204199_11204332_11208685_11208830_11208910_11209104_11211775_11211877_11211992_11212152_11213175_11213329_11214274_11214410_11214552_11214650_11215386_11215472_11215800_11215928_11216913_11217097_11217230_11217392_11221850_11222021_11222108_11222249_11222734_11222906_11222992_11223107_11227336_11227478_11228939_11229036_11232184_11232290_11233202_11233367_11235597_11235760_11236345_11236578_11236792_11236880_11237455_11237558_11237640_11237780_11238044_11238116_11238186_11238305_11242044_11242208_11243058_11243153_11243257_11243386_11243556_11243711_11243801_11243883_11245562_11245713_11245811_11245879_11248065_11248152_11250873_11251087_11252118_11252249_11252481_11252551_11252782_11252959_11253638_11253727_11262396
H1_mix_00048885	chr19	-	786	4	FSM	ENSG00000105518.14	ENST00000589555.5	788	4	0	2	0	-2	multi-exon	FALSE	canonical	3	14	junction_3	342.992063400242	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGCTGCTGTCTTTTTT	11	True	NA	-7	True	AATAAA	-12	NA	11346271	11342780	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11343121_11345251_11345416_11345519_11345738_11346207
H1_mix_00048886	chr19	-	1825	9	FSM	ENSG00000187266.14	ENST00000588859.5	1825	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	45.468223794206	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCCAATCCATCCTGCT	-4	True	NA	NA	False	NA	NA	NA	11384284	11377865	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11378596_11378690_11378779_11380883_11380972_11381055_11381210_11381691_11381850_11381929_11382106_11382846_11382950_11383096_11383233_11384092
H1_mix_00048887	chr19	-	2393	18	NNC	ENSG00000205517.13	novel	2511	19	NA	NA	73	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_14	51.0680392875838	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGTCAGTCTTGTTTAT	3353	False	NA	-5	True	NA	NA	NA	11418500	11394059	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_11394521_11397243_11397359_11397444_11397598_11399854_11399952_11400039_11400109_11400201_11400298_11402010_11402133_11402214_11402248_11402454_11402542_11402649_11402707_11405146_11405232_11405322_11405427_11406418_11406635_11406721_11406865_11415946_11416149_11416613_11416668_11416835_11417060_11418425
H1_mix_00048888	chr19	-	985	2	ISM	ENSG00000205517.13	ENST00000568628.5	747	4	2415	-2	2415	-2	3prime_fragment	FALSE	canonical	3	20	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGGTGTCAGTCTTGTTT	NA	False	NA	-7	True	NA	NA	NA	11395131	11394061	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_11394521_11394605
H1_mix_00048891	chr19	-	1634	9	NNC	ENSG00000130159.15	novel	1768	9	NA	NA	0	66323	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	93.8679258319901	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAAAATTTTTCTGA	6	True	NA	NA	False	NA	NA	NA	11529096	11439605	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_11439633_11505930_11506429_11507456_11507563_11507701_11507851_11507990_11508049_11513055_11513280_11513803_11514222_11519074_11519194_11529061
H1_mix_00048892	chr19	-	2016	8	FSM	ENSG00000161914.10	ENST00000590548.5	2016	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	5.43608502584013	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACCTGACCACTGACCGC	18	False	NA	NA	False	NA	NA	NA	11505821	11483681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11483860_11484041_11484142_11485655_11485771_11486768_11486881_11486986_11487904_11495949_11496166_11498295_11498340_11505487
H1_mix_00048893	chr19	-	834	5	FSM	ENSG00000130159.15	ENST00000588998.5	818	5	0	-16	0	16	multi-exon	FALSE	canonical	1	5	junction_2	143.012237238636	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTCTCCTTTTGGCGCCC	6	True	NA	3	True	AAAAAG	-44	NA	11529096	11505912	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11506429_11507456_11507563_11507990_11508049_11519074_11519194_11529061
H1_mix_00048894	chr19	-	1517	7	FSM	ENSG00000130159.15	ENST00000252440.11	1501	7	0	-16	0	16	multi-exon	FALSE	canonical	1	5	junction_2	102.335640582025	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTCTCCTTTTGGCGCCC	0	True	NA	3	True	AAAAAG	-44	NA	11529137	11505912	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11506429_11507456_11507563_11507990_11508049_11513055_11513280_11513803_11514222_11519074_11519194_11529061
H1_mix_00048896	chr19	-	1183	5	FSM	ENSG00000130165.10	ENST00000587806.5	1172	5	0	-11	0	7	multi-exon	FALSE	canonical	1	2	junction_4	351.679541628455	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGATGTCTTGGGTTCT	3875	False	NA	-6	True	AATAAA	-25	NA	11555467	11553035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11553811_11554010_11554082_11554231_11554366_11555173_11555254_11555344
H1_mix_00048897	chr19	-	560	4	FSM	ENSG00000102575.13	ENST00000592828.6	560	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	12.657891697365	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCGCTCGGACTGTGCAG	1757	False	11578994	NA	False	NA	NA	NA	11578979	11577160	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_11577318_11577592_11577680_11578584_11578765_11578843
H1_mix_00048898	chr19	-	642	4	FSM	ENSG00000132010.16	ENST00000418866.1	642	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	9.46337971105226	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGAATGTACAGAAACCT	3623	False	NA	NA	False	GATAAA	-30	NA	12140315	12133667	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12133986_12135499_12135561_12135768_12135896_12140179
H1_mix_00048900	chr19	-	4505	4	FSM	ENSG00000196826.7	ENST00000428311.1	4505	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	3.55902608401044	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGTGACTATGTGTTTCT	-13	True	NA	-1	True	AATAAA	-21	NA	12551474	12461558	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12465734_12466461_12466520_12466723_12466851_12551329
H1_mix_00048901	chr19	-	783	2	NNC	ENSG00000269242.1	novel	838	5	NA	NA	4437	28944	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCAGTGGCTCACACCTGT	-4	True	NA	NA	False	AAAAAG	-6	NA	12643960	12614886	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_12614925_12643215
H1_mix_00048902	chr19	-	782	2	NNC	ENSG00000269242.1	novel	838	5	NA	NA	4437	28944	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCAGTGGCTCACACCTGT	-4	True	NA	NA	False	AAAAAG	-6	NA	12643960	12614886	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_12614924_12643215
H1_mix_00048906	chr19	-	5411	25	NIC	ENSG00000105576.16	novel	5051	26	NA	NA	13	0	intron_retention	FALSE	canonical	3	20	junction_24	26.4165023654197	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTAGTCTGTGGCTTCC	7471	False	NA	-10	True	AGTAAA	-18	NA	12723919	12699200	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_12701244_12701325_12701454_12701597_12701673_12701751_12701852_12702071_12702148_12702822_12702919_12703427_12703527_12703713_12703802_12705239_12705399_12705491_12705600_12705681_12705769_12706195_12706368_12706569_12706796_12710620_12710774_12711295_12711462_12711552_12711614_12714820_12714940_12715046_12715170_12715242_12715325_12715404_12715539_12715632_12715740_12719028_12719179_12719260_12719337_12720878_12720991_12723248
H1_mix_00048907	chr19	-	5454	25	ISM	ENSG00000105576.16	ENST00000425528.6	5051	26	0	0	0	0	intron_retention	FALSE	canonical	3	4	junction_5	29.4868143790105	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTAGTCTGTGGCTTCC	26	True	NA	-10	True	AGTAAA	-18	NA	12723932	12699200	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_12701244_12701325_12701454_12701597_12701673_12701751_12701852_12702071_12702178_12702822_12702919_12703427_12703527_12703713_12703802_12705239_12705399_12705491_12705600_12705681_12705769_12706195_12706368_12706569_12706796_12710620_12710774_12711295_12711462_12711552_12711614_12714820_12714940_12715046_12715170_12715242_12715325_12715404_12715539_12715632_12715740_12719028_12719179_12719260_12719337_12720878_12720991_12723248
H1_mix_00048909	chr19	-	988	3	FSM	ENSG00000123144.11	ENST00000591254.1	988	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	1197	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGCTTGGTTTGTCT	15	True	NA	-7	True	AGTAAA	-21	NA	12734657	12730639	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_12731069_12731343_12731558_12734312
H1_mix_00048910	chr19	-	1580	6	ISM	ENSG00000132026.15	ENST00000322912.9	1328	7	-16	0	-4	0	intron_retention	FALSE	canonical	2	6	junction_5	9.48683298050514	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGACGAGTGTGGCTGCTT	3	True	NA	-5	True	AATAAA	-17	NA	12835432	12825481	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_12825934_12826774_12826872_12828656_12828768_12828868_12828954_12829810_12829998_12834784
H1_mix_00048911	chr19	-	1990	1	NIC	ENSG00000141837.22	novel	8647	47	NA	NA	6120	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTTTGGATAGGAGTGG	1175	False	NA	-4	True	AATAAA	-17	NA	13208431	13206441	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_13206400_13208400
H1_mix_00048912	chr19	-	216	1	FSM	ENSG00000141837.22	ENST00000637475.1	1975	1	664	1095	234	443	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGAGAGCCACAGCCCTC	3427	False	NA	NA	False	NA	NA	NA	13244981	13244765	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13244800_13245000
H1_mix_00048913	chr19	-	355	1	FSM	ENSG00000141837.22	ENST00000590205.2	3340	1	735	2250	735	-2250	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGGCTGTGTTTGACTGT	NA	False	NA	NA	False	NA	NA	NA	13261970	13261615	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13261600_13262000
H1_mix_00048914	chr19	-	283	3	FSM	ENSG00000141837.22	ENST00000637117.1	1124	3	338	503	338	-435	multi-exon	FALSE	canonical	2	4	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGCCTCCACCTGGCCC	NA	False	NA	NA	False	NA	NA	NA	13308493	13307781	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13307855_13308119_13308252_13308415
H1_mix_00048915	chr19	-	965	3	FSM	ENSG00000141837.22	ENST00000637616.1	3081	3	-207	2323	20	-2323	multi-exon	FALSE	canonical	3	7	junction_1	2	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTATTGTTGGCTGCTTCC	30	True	NA	NA	False	ATTAAA	-10	NA	13506439	13452664	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_13453016_13455106_13455213_13505931
H1_mix_00048916	chr19	-	3762	15	NNC	ENSG00000132005.9	novel	4375	21	NA	NA	-15185	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	4.41761317030464	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGACTCGCCGGGCCTT	7339	False	NA	-6	True	AATAAA	-22	NA	13979240	13961529	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_13962865_13962993_13963040_13963121_13963276_13963537_13963747_13963857_13964008_13965448_13965547_13965625_13965778_13966420_13966531_13966632_13966752_13968564_13968681_13968774_13968895_13969993_13970176_13972742_13973128_13977991_13978087_13978749
H1_mix_00048918	chr19	-	2243	5	NNC	ENSG00000141858.12	novel	2196	5	NA	NA	-80	0	at_least_one_novel_splicesite	FALSE	canonical	2	51	junction_1	219.284489875595	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAAAAAAAAGCCACGGAG	141	False	NA	-14	True	AATAAA	-19	NA	14090831	14087850	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_14088543_14088670_14088783_14088879_14088977_14089067_14089363_14089784
H1_mix_00048919	chr19	-	824	7	FSM	ENSG00000072062.15	ENST00000587372.5	824	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	25.0027776234739	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGATTGAACAGCCAGAGG	7318	False	NA	NA	False	NA	NA	NA	14106860	14093042	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14093238_14097360_14097484_14097578_14097675_14097763_14097891_14100825_14100909_14102815_14102915_14106759
H1_mix_00048920	chr19	-	266	1	FSM	ENSG00000072062.15	ENST00000587533.1	2095	1	227	1602	227	-725	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTAGGCTCTGCAGGGC	8713	False	NA	NA	False	NA	NA	NA	14098238	14097972	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14098000_14098200
H1_mix_00048921	chr19	-	7808	22	NIC	ENSG00000072071.17	novel	7820	23	NA	NA	0	6	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	43.072001101778	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGGTGTGACTTCTTGAG	0	True	NA	0	True	AATAAA	-27	NA	14206169	14147736	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_14151616_14152308_14152438_14152516_14152614_14152783_14152913_14155358_14155528_14156109_14156202_14156657_14156725_14156924_14157146_14157250_14157461_14157881_14158053_14158337_14158553_14159089_14159216_14159400_14159585_14159734_14159774_14160111_14160298_14160592_14160697_14161311_14161627_14162605_14163407_14170681_14170792_14177530_14177745_14183532_14183698_14205984
H1_mix_00048922	chr19	-	8535	23	NIC	ENSG00000072071.17	novel	7853	24	NA	NA	-624	6	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	51.667584191622	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGGTGTGACTTCTTGAG	4	True	NA	0	True	AATAAA	-27	NA	14206811	14147736	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_14151616_14152308_14152438_14152516_14152614_14152783_14152913_14155358_14155528_14156109_14156202_14156657_14156725_14156924_14157146_14157250_14157461_14157881_14158053_14158337_14158553_14159089_14159216_14159400_14159585_14159734_14159774_14160111_14160298_14160592_14160697_14161311_14161627_14162605_14163407_14164620_14164706_14170681_14170792_14177530_14177745_14183532_14183698_14205984
H1_mix_00048923	chr19	-	7908	24	NIC	ENSG00000072071.17	novel	7853	24	NA	NA	69	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_20	47.6029577642157	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAAGAGTGGTGTGACTT	747	False	NA	-6	True	AATAAA	-21	NA	14206100	14147742	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_14151616_14152132_14152223_14152308_14152438_14152516_14152614_14152783_14152913_14155358_14155528_14156109_14156202_14156657_14156725_14156924_14157146_14157250_14157461_14157881_14158053_14158337_14158553_14159089_14159216_14159400_14159585_14159734_14159774_14160111_14160298_14160592_14160697_14161311_14161627_14162605_14163407_14164620_14164706_14170681_14170792_14177530_14177745_14183532_14183698_14205984
H1_mix_00048925	chr19	-	1413	3	FSM	ENSG00000160951.4	ENST00000292513.4	1413	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGCAGGACCGTGTGT	-18	True	NA	-8	True	AATAAA	-15	NA	14475354	14472465	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14472827_14473378_14474338_14475261
H1_mix_00048926	chr19	-	1717	1	FSM	ENSG00000123159.16	ENST00000587811.1	1717	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	AATGAA	-2	NA	14483463	14481746	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14481700_14483500
H1_mix_00048928	chr19	-	1541	1	FSM	ENSG00000269378.1	ENST00000596032.1	609	1	-831	-101	-831	101	mono-exon	FALSE	NA	NA	NA	NA	NA	413	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCAGGAGTTTTAGACCA	NA	False	NA	NA	False	NA	NA	NA	14623073	14621532	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_14621500_14623100
H1_mix_00048929	chr19	-	1914	6	NIC	ENSG00000105143.13	novel	2420	10	NA	NA	94	-7	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	28.7722088133671	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATAATGTTTTGAAATAT	259	False	NA	-23	True	AATAAA	-23	NA	14979599	14961316	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_14962346_14964318_14964362_14968302_14968508_14971736_14971875_14972705_14972914_14979308
H1_mix_00048931	chr19	-	1249	8	FSM	ENSG00000105127.10	ENST00000537303.5	1350	8	0	101	0	-101	multi-exon	FALSE	canonical	1	3	junction_7	73.0593831714158	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCCATCCTGTCTGACAC	-5	True	NA	NA	False	NA	NA	NA	15379781	15361573	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_15361823_15362109_15362252_15368234_15368323_15370145_15370180_15371951_15371999_15372217_15372348_15372850_15373341_15379712
H1_mix_00048933	chr19	-	3118	22	NIC	ENSG00000127527.14	novel	2788	23	NA	NA	3	486	combination_of_known_junctions	FALSE	canonical	3	18	junction_18	58.3388335599349	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTGAAAAAATATTCCAG	19	True	NA	NA	False	NA	NA	NA	16471947	16361092	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_16361985_16385128_16385212_16386170_16386232_16392303_16392441_16393950_16394002_16395343_16395468_16402320_16402486_16403732_16403931_16404587_16404750_16413772_16413846_16417551_16417638_16417947_16418105_16421318_16421477_16425082_16425317_16428701_16428762_16434364_16434491_16436936_16437000_16437769_16437866_16440884_16440910_16441891_16441982_16442177_16442220_16471912
H1_mix_00048935	chr19	-	984	5	NIC	ENSG00000127526.15	novel	1905	4	NA	NA	-16	256	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	44.605913285124	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTCCACCTGCTGAAGTA	-32	True	NA	NA	False	NA	NA	NA	16572431	16564971	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_16565133_16566531_16566658_16568031_16568170_16571511_16571583_16571943
H1_mix_00048939	chr19	-	276	2	FSM	ENSG00000074855.11	ENST00000600711.1	678	2	0	402	0	-402	multi-exon	FALSE	canonical	1	2	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCCAAGCCCGCCCGCCC	158	False	NA	NA	False	NA	NA	NA	17334729	17333689	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_17333801_17334564
H1_mix_00048940	chr19	-	281	1	FSM	ENSG00000269720.2	ENST00000597169.1	856	1	636	-61	636	61	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACCCGGCTCCCTGCGCCC	2544	False	NA	NA	False	NA	NA	NA	17391648	17391367	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_17391400_17391600
H1_mix_00048941	chr19	-	663	1	FSM	ENSG00000269439.7	ENST00000615939.1	751	1	155	-67	155	67	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGTATTGGCATAAGGAT	1198	False	NA	NA	False	AATAAA	-20	NA	17510695	17510032	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_17510000_17510700
H1_mix_00048942	chr19	-	2257	1	FSM	ENSG00000243771.1	ENST00000469924.1	477	1	338	-2118	338	2118	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTATACATTGTGTGTG	377	False	NA	NA	False	AATAAA	-18	NA	17589733	17587476	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_17587500_17589700
H1_mix_00048943	chr19	-	246	2	FSM	ENSG00000284797.1	ENST00000600667.2	702	2	283	173	283	-173	multi-exon	FALSE	canonical	2	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGTAGGGCTGGGCTGG	3403	False	NA	NA	False	NA	NA	NA	18252148	18250311	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18250473_18252063
H1_mix_00048944	chr19	-	432	1	FSM	ENSG00000130518.18	ENST00000599638.2	5520	1	4488	600	4488	-600	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGGGCCGGGGTCATGTC	8925	False	NA	NA	False	NA	NA	NA	18258130	18257698	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_18257700_18258100
H1_mix_00048946	chr19	-	1708	9	NIC	ENSG00000105701.16	novel	1756	9	NA	NA	66	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_2	1175.87721909007	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCCACGGACTCCTGAGC	1147	False	NA	-11	True	AATAAA	-16	NA	18542906	18531762	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_18532256_18532663_18532815_18533269_18533348_18537600_18537774_18538215_18538434_18539370_18539460_18539550_18539721_18541678_18541996_18542887
H1_mix_00048947	chr19	-	1736	9	NIC	ENSG00000105701.16	novel	1761	9	NA	NA	22	0	combination_of_known_junctions	FALSE	canonical	3	856	junction_8	784.424460591968	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCCACGGACTCCTGAGC	1103	False	NA	-11	True	AATAAA	-16	NA	18542950	18531762	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_18532256_18532663_18532796_18533269_18533348_18537600_18537774_18538215_18538437_18539370_18539460_18539550_18539721_18541678_18541996_18542887
H1_mix_00048950	chr19	-	936	9	NNC	ENSG00000105669.14	novel	907	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_1	1212.26912750428	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGTTCCACCTGATGATG	11	True	NA	-17	True	AATAAA	-14	NA	18919363	18899528	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_18899724_18899872_18899948_18900380_18900450_18903267_18903424_18904770_18904853_18905575_18905630_18910970_18911072_18912983_18913047_18919222
H1_mix_00048951	chr19	-	877	6	FSM	ENSG00000254901.8	ENST00000494489.6	877	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	74.1862520956545	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGAGAACATTGTGTGGA	NA	False	NA	-106	True	NA	NA	NA	19192588	19177007	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19177461_19180685_19180762_19182572_19182684_19186033_19186099_19186892_19187006_19192529
H1_mix_00048952	chr19	-	2538	1	FSM	ENSG00000178093.14	ENST00000585580.4	1330	1	-784	-424	-784	424	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCGAGTCCGAAGCGGGC	NA	False	NA	NA	False	NA	NA	NA	19516332	19513794	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_19513800_19516300
H1_mix_00048953	chr19	-	4924	22	NNC	ENSG00000089639.11	novel	3528	21	NA	NA	0	10057	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	29.6687685565882	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACCTTGAAAGGTGACTG	-25	True	NA	-27	True	AATAAA	-22	NA	19643657	19619418	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_19620826_19629477_19630337_19630470_19630538_19633802_19634191_19634506_19634704_19634791_19634930_19635024_19635214_19635414_19635570_19635643_19635722_19636706_19636788_19636916_19637030_19637364_19637562_19637919_19638058_19638158_19638330_19638401_19638483_19640084_19640193_19640295_19640361_19640445_19640572_19641809_19641868_19641975_19642052_19642534_19642620_19643510
H1_mix_00048954	chr19	-	2199	6	NNC	ENSG00000064547.14	novel	2546	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	100.882902416614	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCTCCAAAACATTTG	5	True	NA	-33	True	AGTAAA	-16	NA	19628529	19623668	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_19624570_19626542_19627285_19627396_19627505_19627753_19627970_19628091_19628214_19628419
H1_mix_00048955	chr19	-	1821	4	NIC	ENSG00000064547.14	novel	2546	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_3	109.42374310704	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCTCCAAAACATTTG	5	True	NA	-33	True	AGTAAA	-16	NA	19628529	19623668	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_19624570_19626542_19627285_19628091_19628168_19628427
H1_mix_00048956	chr19	-	3284	20	NIC	ENSG00000089639.11	novel	3528	21	NA	NA	7	-3	combination_of_known_junctions	FALSE	canonical	3	14	junction_3	23.1991259745573	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGCCCTTGGGTGCATCT	19	True	NA	-7	True	AATAAA	-10	NA	19643613	19629478	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_19630337_19630470_19630538_19633802_19634191_19634791_19634930_19635024_19635214_19635414_19635570_19635643_19635722_19636706_19636797_19636916_19637030_19637364_19637562_19637919_19638058_19638158_19638330_19638401_19638483_19640084_19640193_19640295_19640361_19640445_19640572_19641809_19641868_19641975_19642052_19642534_19642620_19643510
H1_mix_00048958	chr19	-	890	3	FSM	ENSG00000231205.12	ENST00000687152.1	1099	3	79	130	35	-28	multi-exon	FALSE	canonical	3	65	junction_1	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTAAATTTCTACTTCCA	7343	False	NA	-29	True	NA	NA	NA	20424886	20340391	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_20341102_20408949_20409029_20424785
H1_mix_00048960	chr19	-	1656	4	NIC	ENSG00000231205.12	novel	1564	4	NA	NA	8	139	combination_of_known_splicesites	FALSE	canonical	3	36	junction_2	182.746332992545	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGAGACAAGATCTTATG	7316	False	NA	NA	False	AAAACA	-44	NA	20424913	20404818	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_20406133_20408949_20409046_20417665_20417784_20424785
H1_mix_00048961	chr19	-	924	4	NNC	ENSG00000269110.1	novel	522	5	NA	NA	95808	6216	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	27.6204433144888	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTTTTCAACTTCATTT	5	True	NA	-16	True	AATAAA	-21	NA	20565775	20547575	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_20548139_20552474_20552571_20553708_20553836_20565637
H1_mix_00048962	chr19	-	4404	5	NNC	ENSG00000188171.17	novel	6063	4	NA	NA	30	-1428	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	58.9719212846249	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGATCATGAGGTCAGGA	74	False	NA	NA	False	NA	NA	NA	20661507	20621366	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_20624365_20624531_20625651_20645683_20645780_20646278_20646406_20661443
H1_mix_00048963	chr19	-	307	1	FSM	ENSG00000268433.1	ENST00000594186.1	672	1	-216	581	-216	-581	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTTAGAGCCGAGGCGACC	NA	False	NA	NA	False	NA	NA	NA	21678437	21678130	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_21678100_21678400
H1_mix_00048964	chr19	-	4247	4	NNC	ENSG00000197020.12	novel	5691	5	NA	NA	-12	16137	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	46.2673390921357	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTTTTCATCTCTACTGG	NA	False	NA	NA	False	NA	NA	NA	21767591	21706633	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_21706675_21724041_21727990_21765693_21765787_21767426
H1_mix_00048965	chr19	-	4833	5	NNC	ENSG00000198521.12	novel	3004	6	NA	NA	-2725	24934	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.7152950233049	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGGAGGCTGAGGTGGG	7669	False	NA	NA	False	NA	NA	NA	21844372	21780011	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_21780037_21806453_21809808_21817887_21817987_21819094_21819222_21843144
H1_mix_00048967	chr19	-	2071	1	FSM	ENSG00000270479.1	ENST00000604107.1	901	1	-115	-1055	-115	1055	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTAAACAAATTTGTGTC	NA	False	NA	NA	False	NA	NA	NA	23124203	23122132	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_23122100_23124200
H1_mix_00048969	chr19	-	5843	7	ISM	ENSG00000269416.7	ENST00000596283.5	2766	8	-574	-711	-574	338	intron_retention	FALSE	canonical	3	35	junction_6	42.635730972455	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGGGTACTCAGCAGAAAG	7388	False	NA	NA	False	NA	NA	NA	23408665	23398758	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_23401048_23402176_23402513_23403205_23403494_23403719_23403748_23404950_23405109_23405257_23405336_23405999
H1_mix_00048970	chr19	-	6013	4	ISM	ENSG00000269416.7	ENST00000600643.5	2387	5	7406	-474	-574	338	3prime_fragment	FALSE	canonical	3	56	junction_3	50.7630661888039	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGGGTACTCAGCAGAAAG	7388	False	NA	NA	False	NA	NA	NA	23408665	23398758	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_23401048_23403205_23403494_23403719_23403748_23405257
H1_mix_00048971	chr19	-	2783	6	NIC	ENSG00000269416.7	novel	798	6	NA	NA	3	212	intron_retention	FALSE	canonical	3	25	junction_5	51.8405246887028	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCGATTTAGTTGGAGACC	-4	True	NA	-9	True	AATAAA	-20	NA	23415997	23398884	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_23401048_23403205_23403510_23403719_23403748_23405257_23405336_23405999_23406106_23415893
H1_mix_00048972	chr19	-	1522	8	NNC	ENSG00000269416.7	novel	2766	8	NA	NA	9	327	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_5	32.7096066522809	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCTTGCCTCTGTGTTT	19	True	NA	0	True	NA	NA	NA	23416034	23400656	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_23401048_23402176_23402513_23403205_23403510_23403719_23403748_23404476_23404563_23404950_23405109_23405257_23405336_23415893
H1_mix_00048973	chr19	-	251	1	FSM	ENSG00000279882.1	ENST00000623712.1	366	1	-116	231	-116	-231	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTAAATTCCAGTCTAACA	NA	False	NA	NA	False	NA	NA	NA	27639781	27639530	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_27639500_27639800
H1_mix_00048974	chr19	-	6399	6	FSM	ENSG00000261824.8	ENST00000668933.1	6446	6	65	-18	8	0	multi-exon	TRUE	canonical	3	8	junction_1	28.9509930745044	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGTGTTGTGTGGACT	81	False	NA	-2	True	AATAAA	-27	NA	27793834	27721701	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_27726987_27727816_27727980_27732795_27732968_27746097_27746341_27792999_27793233_27793531
H1_mix_00048975	chr19	-	2240	4	FSM	ENSG00000261824.8	ENST00000664383.1	2240	4	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	35.052341814302	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATATCCTGCAATAAAAAT	-5	True	NA	-45	True	AATGAA	-3	NA	27793388	27721744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_27723181_27732795_27732968_27746097_27746341_27792999
H1_mix_00048977	chr19	-	1676	2	NNC	ENSG00000260725.1	novel	1570	2	NA	NA	5999	34	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGCCTGGTTGCTTTCA	NA	False	NA	-2	True	ATTAAA	-16	NA	28423491	28418448	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_28419912_28423278
H1_mix_00048978	chr19	-	1178	8	Fusion	ENSG00000267537.1_ENSG00000283269.1	novel	451	4	NA	NA	137	-18310	multi-exon	FALSE	canonical	2	4	junction_2	12.1032969028429	44	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCATGTACTCTTTGATA	-2	True	NA	NA	False	ATTAAA	-1	NA	28727640	28620688	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_-_28620960_28648283_28648432_28721953_28722116_28722569_28722781_28724203_28724319_28724818_28724990_28726298_28726338_28727579
H1_mix_00048979	chr19	-	4261	3	FSM	ENSG00000131943.20	ENST00000623113.3	3726	3	0	-535	0	-104	multi-exon	FALSE	canonical	3	4	junction_2	23.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCATGTGCCTGGTGTG	455	False	NA	-9	True	NA	NA	NA	29715060	29699040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_29702978_29708253_29708424_29714906
H1_mix_00048981	chr19	-	1929	16	FSM	ENSG00000124299.15	ENST00000588328.6	1929	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	268.09699737222	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTGTGCGTGGCTTCCC	34	False	NA	-3	True	AATAAA	-17	NA	33521749	33386951	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_33387482_33387889_33388082_33391294_33391480_33396089_33396156_33401720_33401870_33411671_33411750_33413574_33413644_33462994_33463042_33463986_33464063_33478045_33478091_33489995_33490058_33493289_33493338_33500937_33501002_33511027_33511156_33512592_33512777_33521743
H1_mix_00048982	chr19	-	433	6	FSM	ENSG00000124299.15	ENST00000590408.1	433	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	305.037440324954	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAATTTATGTTCCCTGAG	NA	False	NA	NA	False	ATTAAA	-12	NA	33511138	33462950	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_33463042_33463986_33464063_33478045_33478091_33489995_33490058_33493289_33493338_33511027
H1_mix_00048983	chr19	-	3443	4	FSM	ENSG00000153896.19	ENST00000587354.6	3476	4	6	27	6	-27	multi-exon	FALSE	canonical	2	2	junction_1	13.9283882771841	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATAAAAGGTTGTTA	-11	True	NA	NA	False	GATAAA	-5	NA	34773223	34762821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_34765642_34767315_34767412_34769428_34769556_34772823
H1_mix_00048984	chr19	-	1327	5	FSM	ENSG00000153896.19	ENST00000673783.1	1327	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	14.0245320777557	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTCTTACGTCTCCAGC	21	True	NA	NA	False	NA	NA	NA	34773191	34765043	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_34765642_34767315_34767412_34769428_34769556_34772335_34772474_34772823
H1_mix_00048985	chr19	-	631	2	FSM	ENSG00000271109.2	ENST00000657568.1	628	2	0	-3	0	-1	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGGTCTCATATTTTTAGT	NA	False	NA	-1	True	AATAAA	-19	NA	34850796	34849046	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_34849550_34850668
H1_mix_00048986	chr19	-	737	3	NNC	ENSG00000271109.2	novel	874	3	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	26.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGGTCTCATATTTTTAGT	NA	False	NA	-1	True	AATAAA	-19	NA	34860576	34849046	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_34849550_34860173_34860303_34860471
H1_mix_00048987	chr19	-	2137	1	FSM	ENSG00000262497.1	ENST00000577135.1	713	1	-82	-1342	-82	1342	mono-exon	FALSE	NA	NA	NA	NA	NA	913	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCCCAGGCTGGAGTGC	NA	False	NA	NA	False	NA	NA	NA	35233085	35230948	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_35230900_35233100
H1_mix_00048989	chr19	-	884	12	NIC	ENSG00000161249.21	novel	970	14	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	625	junction_1	336.60789656967	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	11	True	NA	-10	True	AATAAA	-21	NA	35510430	35497219	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510378
H1_mix_00048990	chr19	-	924	12	NIC	ENSG00000161249.21	novel	970	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_3	508.697640309249	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	-18	True	NA	-10	True	AATAAA	-21	NA	35510459	35497219	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35497539_35497646_35497682_35498715_35498764_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510378
H1_mix_00048991	chr19	-	982	12	NIC	ENSG00000161249.21	novel	970	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_2	509.502122883841	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	-5	True	NA	-10	True	AATAAA	-21	NA	35510510	35497219	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35497539_35498715_35498764_35499957_35500030_35500377_35500420_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510378
H1_mix_00048992	chr19	-	969	12	NIC	ENSG00000161249.21	novel	593	12	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_2	468.610589186289	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACGACTTTCTCAAATTTT	25	True	NA	-13	True	AATAAA	-18	NA	35510416	35497222	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35497539_35497646_35497682_35498597_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35510183_35510253_35510378
H1_mix_00048994	chr19	-	441	7	NIC	ENSG00000161249.21	novel	582	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	131	junction_3	632.780284845292	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	18	True	NA	-3	True	AATAAA	-17	NA	35510423	35503303	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35503448_35505717_35505766_35505938_35505987_35508204_35508241_35509910_35509962_35510183_35510253_35510378
H1_mix_00048996	chr19	-	880	9	NIC	ENSG00000161265.15	novel	1036	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	16	junction_2	43.8263619297792	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTTTGCTGTGGTTTG	15	True	NA	-5	True	AATAAA	-26	NA	35745402	35742526	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_35742804_35743154_35743206_35743295_35743346_35743808_35743905_35744069_35744146_35744322_35744422_35744625_35744739_35745124_35745188_35745347
H1_mix_00049002	chr19	-	3364	15	NNC	ENSG00000105270.15	novel	3350	14	NA	NA	11	52350	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	34.830566566551	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAACAAAAAAACCCACAATA	-10	True	NA	NA	False	NA	NA	NA	36032860	35962309	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_35962338_36014660_36016213_36016906_36016980_36017385_36017451_36017654_36017779_36017847_36017992_36018897_36019027_36019170_36019307_36024395_36024633_36026146_36026266_36026585_36026748_36026951_36027046_36027131_36027272_36032191_36032416_36032723
H1_mix_00049003	chr19	-	853	5	NIC	ENSG00000181392.17	novel	1377	8	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_4	78.3976243262511	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGAAGATACTAGGTGC	-2	True	NA	-32	True	AATAAA	-18	NA	36008779	36003306	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_36003521_36003612_36003672_36005332_36005438_36006422_36006672_36008553
H1_mix_00049015	chr19	-	998	4	FSM	ENSG00000266916.8	ENST00000585890.3	1038	4	40	0	-1	0	multi-exon	TRUE	canonical	0	0	junction_2	5.24933858267454	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCAAGGTTCTTTCTT	5	True	NA	NA	False	AATAAA	-40	NA	37507047	37497158	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_37497593_37498023_37498184_37505845_37506041_37506838
H1_mix_00049020	chr19	-	828	5	NNC	ENSG00000167641.11	novel	560	4	NA	NA	-79	16225	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	134.882356147867	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCACCTTGGCCTCCCAAA	2	False	NA	NA	False	NA	NA	NA	38256611	38235011	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_38235043_38251236_38251447_38252305_38252339_38252893_38252975_38256138
H1_mix_00049022	chr19	-	426	3	FSM	ENSG00000104814.13	ENST00000592225.1	575	3	149	0	149	0	multi-exon	FALSE	canonical	3	12	junction_2	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTAAGGCTGGGGGTTG	4213	False	NA	NA	False	NA	NA	NA	38614724	38614042	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38614086_38614244_38614293_38614389
H1_mix_00049024	chr19	-	440	2	FSM	ENSG00000104823.9	ENST00000601094.5	440	2	0	0	0	0	multi-exon	FALSE	canonical	3	1708	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCAGACGCTCTTCACAC	8661	False	NA	NA	False	NA	NA	NA	38831659	38831077	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38831167_38831308
H1_mix_00049025	chr19	-	588	2	FSM	ENSG00000104824.18	ENST00000595804.5	588	2	0	0	0	0	multi-exon	FALSE	canonical	3	1559	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCACTTGCTGGGATTC	9845	False	NA	-25	True	AATAAA	-18	NA	38837585	38836394	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_38836781_38837383
H1_mix_00049042	chr19	-	731	5	NIC	ENSG00000105227.16	novel	170	2	NA	NA	3	9	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	9.39081998549647	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGACCCTGTC	8480	False	NA	NA	False	AATAAA	-17	NA	40413361	40407276	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_40407715_40407905_40408032_40408157_40408257_40408339_40408384_40413337
H1_mix_00049043	chr19	-	909	4	FSM	ENSG00000090013.11	ENST00000643519.1	938	4	0	29	0	1	multi-exon	FALSE	canonical	1	7	junction_2	216.447581542404	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACCGACTGTGTGACTC	23	True	NA	-10	True	AATAAA	-31	NA	40465764	40447793	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40448047_40451363_40451493_40458173_40458546_40465609
H1_mix_00049044	chr19	-	3413	9	NIC	ENSG00000105245.9	novel	2249	9	NA	NA	4	-32	combination_of_known_junctions	FALSE	canonical	2	3	junction_7	42.871719991155	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAATTTTGTTTCGTTAT	97	False	NA	-34	True	AATATA	-6	NA	40690549	40665936	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_40668139_40669897_40670021_40673343_40673647_40677231_40677422_40680916_40681058_40682727_40682803_40682893_40683043_40684416_40684557_40690459
H1_mix_00049046	chr19	-	2438	15	FSM	ENSG00000123815.13	ENST00000678404.1	2451	15	0	13	0	3	multi-exon	FALSE	canonical	0	0	junction_14	58.1075709001707	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCTTTTCTCTGCGCTA	1270	False	NA	-2	True	AATAAA	-20	NA	40715616	40691526	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40715324
H1_mix_00049047	chr19	-	1439	10	NIC	ENSG00000188493.15	novel	1792	9	NA	NA	9	-360	combination_of_known_splicesites	FALSE	canonical	3	19	junction_3	32.7259477222736	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCACCCGCCTCGGCCTC	29	True	NA	NA	False	GGGGCT	-44	NA	40750439	40741221	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_40741440_40741693_40741865_40742072_40742190_40742514_40742771_40743904_40743976_40744066_40744197_40744558_40744684_40745129_40745199_40749480_40749608_40750284
H1_mix_00049048	chr19	-	2524	6	NIC	ENSG00000188493.15	novel	1792	9	NA	NA	0	-360	intron_retention	FALSE	canonical	3	36	junction_2	29.4006802642388	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCACCCGCCTCGGCCTC	20	True	NA	NA	False	GGGGCT	-44	NA	40750448	40741221	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_40741440_40741693_40742771_40743914_40743982_40744558_40744684_40745129_40745199_40749480
H1_mix_00049051	chr19	-	531	3	FSM	ENSG00000105404.11	ENST00000601028.1	530	3	0	-1	0	1	multi-exon	FALSE	canonical	3	7	junction_2	683.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTCCCCCAGCATCTTC	9976	False	NA	-20	True	AATAAA	-24	NA	41958914	41956684	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_41956935_41957017_41957120_41958735
H1_mix_00049056	chr19	-	2698	15	NNC	ENSG00000105737.10	novel	2101	15	NA	NA	388	459	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	15.5583168912899	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACAGAGCAGCCCTGAG	6082	False	NA	-35	True	AATAAA	-27	NA	42069818	42020871	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_42021185_42021300_42021475_42021946_42022057_42042551_42042756_42053601_42053710_42053824_42053930_42054319_42054473_42056661_42056824_42056924_42056979_42059348_42059528_42062487_42062654_42062757_42062856_42065222_42065388_42065691_42065821_42069240
H1_mix_00049079	chr19	-	6021	11	NIC	ENSG00000124459.12	novel	3926	10	NA	NA	45	2025	combination_of_known_splicesites	FALSE	canonical	3	11	junction_7	20.2691884395996	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAATCTTGTCATCTGCA	48	False	NA	NA	False	NA	NA	NA	43935233	43910598	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_43915201_43918869_43918963_43919572_43919700_43922170_43922218_43924237_43924311_43924401_43924562_43925324_43925459_43931246_43931366_43932603_43932691_43934425_43934695_43934923
H1_mix_00049080	chr19	-	3811	12	NNC	ENSG00000124459.12	novel	3926	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_11	21.6848196893282	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCCACCTCCAGTGCCAA	3	True	NA	-8	True	ATTAAA	-32	NA	43935278	43912630	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_43915201_43918869_43918963_43919572_43919700_43922170_43922218_43924237_43924311_43924401_43924562_43925324_43925459_43929917_43930001_43931246_43931366_43932603_43932691_43934425_43934695_43935229
H1_mix_00049087	chr19	-	3631	11	FSM	ENSG00000104884.17	ENST00000684264.1	3621	11	0	-10	0	0	multi-exon	FALSE	canonical	3	153	junction_8	10.8485022007649	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCCTGCCAGCTTCCG	NA	False	NA	-67	True	AATAAA	-16	NA	45358492	45349836	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45351722_45352208_45352353_45352505_45352650_45352745_45352817_45353082_45353156_45353241_45353335_45354729_45354852_45355664_45355729_45357269_45357372_45357473_45357544_45357629
H1_mix_00049088	chr19	-	1131	7	ISM	ENSG00000012061.16	ENST00000340192.11	949	9	343	3825	5	-3	internal_fragment	FALSE	canonical	3	63	junction_1	134.624168211606	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCATGGTGGTGTGAGCTT	31	True	NA	-4	True	AATAAA	-12	NA	45423496	45413438	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_45413746_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269
H1_mix_00049091	chr19	-	2094	10	FSM	ENSG00000125744.12	ENST00000591286.5	2111	10	17	0	9	0	multi-exon	FALSE	canonical	2	3	junction_6	39.4107837595652	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGAGGCCTCTTGTGCTTC	-15	True	NA	-4	True	AATAAA	-16	NA	45497038	45485293	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45485790_45486054_45486114_45488470_45488518_45488636_45488707_45488847_45488987_45489345_45489554_45494117_45494421_45494525_45495006_45495094_45495140_45496791
H1_mix_00049099	chr19	-	682	4	FSM	ENSG00000125743.11	ENST00000588301.5	702	4	20	0	20	0	multi-exon	FALSE	canonical	2	4	junction_3	3697.11151516364	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGGTATCTGTTTCCAG	621	False	NA	-20	True	AATAAA	-16	NA	45692296	45687462	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_45687728_45688386_45688567_45691886_45691993_45692165
H1_mix_00049100	chr19	-	958	3	NNC	ENSG00000177051.6	novel	2993	2	NA	NA	4	-134	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	18	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCAAGGCTCCTCCTGAC	4	True	NA	NA	False	NA	NA	NA	45730892	45713077	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_45713574_45723472_45723891_45730848
H1_mix_00049124	chr19	-	358	2	ISM	ENSG00000105499.14	ENST00000595161.5	438	5	12747	213	5841	59	internal_fragment	FALSE	canonical	2	7	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAAGTATATTTGTCTT	NA	False	NA	-1	True	AATAAA	-20	NA	48062090	48061572	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr19_-_48061838_48061997
H1_mix_00049133	chr19	-	2765	18	NIC	ENSG00000105559.12	novel	3073	20	NA	NA	18	7	combination_of_known_junctions	FALSE	canonical	3	15	junction_10	27.5167140148131	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTCTTTCTGTCTGTCTG	7935	False	NA	0	True	ATTAAA	-22	NA	48868436	48837089	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_48837552_48838016_48838130_48841148_48841311_48845369_48845447_48845516_48845617_48847899_48848041_48852227_48852327_48853681_48853832_48854006_48854088_48854216_48854265_48858859_48859140_48859468_48859685_48860349_48860460_48861400_48861502_48861619_48861693_48865502_48865611_48867536_48867627_48868082
H1_mix_00049145	chr19	-	1600	16	FSM	ENSG00000039650.12	ENST00000600910.5	1600	16	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_3	68.0165339376308	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCCGGCATTTTGCTG	9	True	NA	-2	True	AATAAA	-17	NA	49867555	49861203	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_49861366_49861448_49861511_49861607_49861696_49862043_49862106_49862184_49862282_49862370_49862464_49862537_49862609_49862689_49862739_49863688_49863761_49863963_49864072_49864178_49864237_49864323_49864404_49865126_49865427_49866398_49866446_49867053_49867218_49867468
H1_mix_00049166	chr19	-	9173	12	Fusion	ENSG00000197608.12_ENSG00000256087.7	novel	3877	7	NA	NA	12	0	intron_retention	FALSE	non_canonical	0	0	junction_11	9.95693205097678	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTGCGAACGTTAAGTT	-14	True	NA	-1	True	AATAAA	-27	NA	52095753	52031377	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_-_52035441_52040487_52040584_52041479_52041607_52046853_52047061_52048694_52049508_52064493_52067611_52076043_52076173_52076957_52077085_52084786_52084879_52088936_52089003_52093845_52094002_52095573
H1_mix_00049169	chr19	-	3193	6	NIC	ENSG00000167766.20	novel	2890	6	NA	NA	0	339	intron_retention	FALSE	canonical	3	18	junction_3	27.8897830755279	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCGTGGCAAGGCCTTT	78	False	NA	NA	False	AAAAAG	-37	NA	52690474	52614278	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_52614798_52616717_52619063_52635065_52635154_52655560_52655688_52660761_52660844_52690442
H1_mix_00049170	chr19	-	8170	8	Fusion	ENSG00000288953.1_ENSG00000213020.10	novel	4796	9	NA	NA	0	-4	multi-exon	FALSE	canonical	1	1	junction_5	12.7998724483441	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCGTGTTTGGTGGCCT	-21	True	NA	-9	True	AATAAA	-18	NA	52735054	52699356	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr19_-_52706865_52707468_52707543_52714014_52714142_52715831_52715914_52716110_52716234_52728729_52728832_52729905_52730006_52735000
H1_mix_00049175	chr19	-	4104	5	NNC	ENSG00000204604.13	novel	4027	5	NA	NA	19	-4	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	64.9326574229024	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTGATTTGGATGAGTT	18	False	NA	-14	True	AATAAA	-14	NA	52857600	52838539	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr19_-_52842152_52849086_52849214_52853878_52854127_52854257_52854346_52857571
H1_mix_00049177	chr19	-	6339	6	FSM	ENSG00000182986.15	ENST00000682928.1	6331	6	0	-8	0	0	multi-exon	FALSE	canonical	2	9	junction_5	24.968780506865	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATCTTCTTTCTTTATG	19	True	NA	0	True	ATTAAA	-23	NA	52897635	52876171	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_52881984_52888126_52888254_52890240_52890329_52891228_52891347_52893778_52893857_52897519
H1_mix_00049180	chr19	-	888	6	NIC	ENSG00000182986.15	novel	582	5	NA	NA	17	207	combination_of_known_junctions	FALSE	canonical	1	3	junction_3	30.3881555873337	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGACTTTCACTGTCCCC	36	True	NA	NA	False	AATGAA	-19	NA	52897618	52887984	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_52888254_52890240_52890329_52891228_52891347_52893383_52893620_52893778_52893857_52897519
H1_mix_00049182	chr19	-	2433	5	FSM	ENSG00000170954.12	ENST00000597748.5	2461	5	47	-19	47	0	multi-exon	FALSE	canonical	1	3	junction_4	11.7765657133139	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTGTCTCAGATTTTAA	9296	False	NA	-1	True	ATTAAA	-23	NA	53123602	53107878	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_53109909_53115209_53115308_53116312_53116434_53122661_53122744_53123500
H1_mix_00049183	chr19	-	2132	3	FSM	ENSG00000170954.12	ENST00000601493.5	2132	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	4	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTGTCTCAGATTTTAA	23	True	NA	-1	True	ATTAAA	-23	NA	53132875	53107878	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_53109909_53122661_53122744_53132855
H1_mix_00049186	chr19	-	2386	4	FSM	ENSG00000170954.12	ENST00000421033.5	2402	4	17	-1	-1	0	multi-exon	FALSE	canonical	3	22	junction_3	5.43650214343336	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTGTCTCAGATTTTAA	-3	True	NA	-1	True	ATTAAA	-23	NA	53132901	53107878	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_53109909_53116312_53116434_53122661_53122744_53132748
H1_mix_00049193	chr19	-	3022	8	FSM	ENSG00000160439.16	ENST00000291892.10	3022	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	33.7082319020026	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAAAAAGAAGA	7459	False	NA	3	True	NA	NA	NA	55063833	55044342	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55045310_55047104_55047489_55048045_55048258_55048328_55048542_55048658_55048764_55056652_55056809_55059156_55059276_55062967
H1_mix_00049196	chr19	-	2894	21	NIC	ENSG00000125503.13	novel	2997	22	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_4	47.09827491533	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGCTCTGTGTTCCCAG	-1	True	NA	-5	True	AATAAA	-17	NA	55117637	55090917	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr19_-_55091559_55091649_55091701_55091858_55091910_55092221_55092327_55092621_55092663_55092782_55092869_55093015_55093077_55093152_55093234_55094344_55094436_55094660_55094799_55095290_55095359_55095444_55095604_55095866_55095941_55096050_55096179_55096261_55096336_55098783_55098859_55098950_55099096_55103408_55103569_55112466_55112586_55112664_55112796_55117222
H1_mix_00049197	chr19	-	1016	14	FSM	ENSG00000105048.18	ENST00000587758.5	1016	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	497.488949061052	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTCTCTCCTGGTTAA	8538	False	NA	-2	True	NA	NA	NA	55149193	55132793	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55141921_55145543_55145566_55146680_55146708_55147007_55147022_55147125_55147169_55147998_55148094_55149160
H1_mix_00049219	chr19	+	298	1	Intergenic	novelGene_612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTCCGTCCCCTTCTTA	NA	False	NA	NA	False	NA	NA	NA	5550725	5551023	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_5550700_5551000
H1_mix_00049220	chr19	+	1519	1	Intergenic	novelGene_615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCCTCCCAATAGTTCT	872	False	NA	NA	False	NA	NA	NA	10672351	10673870	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_10672400_10673900
H1_mix_00049221	chr19	+	282	1	Intergenic	novelGene_618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGCAGCCAGC	NA	False	NA	NA	False	NA	NA	NA	15233782	15234064	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_15233800_15234100
H1_mix_00049222	chr19	+	286	1	Intergenic	novelGene_621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACATAGCCAGTTTTGA	2610	False	NA	NA	False	NA	NA	NA	17379930	17380216	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_17379900_17380200
H1_mix_00049223	chr19	+	229	1	Intergenic	novelGene_622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCGAGCTTCAGGTAACT	1896	False	NA	NA	False	NA	NA	NA	17595715	17595944	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_17595700_17595900
H1_mix_00049224	chr19	+	1075	1	Intergenic	novelGene_624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1884	False	NA	NA	False	NA	NA	NA	19620829	19621904	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_19620800_19621900
H1_mix_00049225	chr19	+	218	1	Intergenic	novelGene_626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCAAAGTTGCTGAGATT	2286	False	NA	NA	False	NA	NA	NA	20108353	20108571	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_20108400_20108600
H1_mix_00049227	chr19	+	202	1	Intergenic	novelGene_632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCATCACCTCCCCTCCT	1119	False	NA	NA	False	NA	NA	NA	22569783	22569985	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_22569800_22570000
H1_mix_00049228	chr19	+	217	1	Intergenic	novelGene_633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCACCAAATTGTTTTGC	2509	False	NA	NA	False	NA	NA	NA	22571173	22571390	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_22571200_22571400
H1_mix_00049229	chr19	+	263	1	Intergenic	novelGene_641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	33184534	33184797	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr19_+_33184500_33184800
H1_mix_00049234	chr1_KI270711v1_random	-	2985	11	Intergenic	novelGene_654	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	30	junction_8	33.433665668006	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTTACATTCAGTGTT	NA	False	NA	NA	False	ATTAAA	-32	NA	18432	4594	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr1_KI270711v1_random_-_6371_6990_7103_7816_7990_8603_8656_9364_9538_10139_10192_10910_11084_11706_11759_12800_12965_16870_16923_18226
H1_mix_00049242	chr2	+	713	5	FSM	ENSG00000143727.16	ENST00000413140.5	689	5	-24	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	1252.80994169108	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTTATGGGGTATTTTAA	NA	False	NA	14	True	AATAAA	-16	NA	264868	277506	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_265008_271865_271940_272036_272151_276979_277086_277226
H1_mix_00049243	chr2	+	1552	6	FSM	ENSG00000143727.16	ENST00000272067.10	1552	6	0	0	0	0	multi-exon	FALSE	canonical	3	610	junction_2	1075.86047422517	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGTCTGCCTGTTTTT	NA	False	NA	99	True	AATAAA	-36	NA	264868	278283	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_265008_271865_271940_272191_272306_275139_275202_276979_277086_277226
H1_mix_00049246	chr2	+	1495	6	FSM	ENSG00000143727.16	ENST00000272065.10	1474	6	-21	0	0	0	multi-exon	FALSE	canonical	3	2212	junction_3	307.436887832283	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGTCTGCCTGTTTTT	-13	True	NA	99	True	AATAAA	-36	NA	264925	278283	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_265008_271865_271940_272036_272151_275139_275202_276979_277086_277226
H1_mix_00049250	chr2	+	1882	8	NNC	ENSG00000172554.12	novel	666	8	NA	NA	3	5592	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_7	32.150157901031	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACCTATTCATCAGAAATA	-5	True	NA	NA	False	AAGAAA	-44	NA	950870	1171227	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_951069_1083517_1083656_1098195_1098253_1098352_1098411_1137621_1137666_1137767_1137810_1165547_1165636_1169970
H1_mix_00049251	chr2	+	1888	17	NNC	ENSG00000172554.12	novel	1907	17	NA	NA	1	-13	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	30.9641299530602	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGTTTCCAAAGACGGGT	4	True	NA	-7	True	AATAAA	-8	NA	950849	1367600	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_951069_1083517_1083656_1098200_1098253_1098352_1098411_1137621_1137666_1137767_1137810_1165547_1165636_1173091_1173184_1209102_1209231_1237887_1238018_1239737_1239777_1247326_1247444_1259369_1259442_1267364_1267572_1308493_1308587_1316264_1316376_1367342
H1_mix_00049252	chr2	+	2800	7	NNC	ENSG00000172554.12	novel	1818	8	NA	NA	0	11	intron_retention	FALSE	canonical	3	14	junction_6	33.6584148303049	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCGGGTATTTTAAAGTC	63	False	NA	NA	False	AATAAA	-36	NA	950938	1161682	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_951069_1083517_1083656_1098195_1098253_1098352_1098411_1137621_1137666_1137767_1137810_1159351
H1_mix_00049253	chr2	+	2898	13	NNC	ENSG00000172554.12	novel	1907	17	NA	NA	-7	-6907	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_12	30.4849689737965	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGACTATGTTTGATTTT	-15	True	NA	53	True	NA	NA	NA	950860	1249697	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_951069_1083517_1083656_1098195_1098253_1098352_1098411_1137621_1137666_1137767_1137810_1165547_1165636_1173091_1173184_1209102_1209231_1237887_1238018_1239737_1239777_1247326_1247444_1247940
H1_mix_00049254	chr2	+	2510	12	FSM	ENSG00000171853.16	ENST00000324266.10	2499	12	-11	0	8	0	multi-exon	FALSE	canonical	3	133	junction_7	21.7814084040981	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTCTGCTGCGTGTCT	-18	True	NA	12	True	AATAAA	-13	NA	3379682	3479565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_3379877_3387619_3388671_3401776_3401894_3421880_3421995_3424524_3424664_3443778_3443892_3457620_3457694_3460262_3460337_3465596_3465696_3477694_3477796_3478845_3478934_3479218
H1_mix_00049255	chr2	+	2475	12	FSM	ENSG00000171853.16	ENST00000382110.6	2483	12	8	0	8	0	multi-exon	FALSE	canonical	3	17	junction_1	47.2312755325298	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTCTGCTGCGTGTCTTC	-18	True	NA	14	True	AATAAA	-15	NA	3379682	3479567	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_3379840_3387619_3388671_3401776_3401894_3421880_3421995_3424524_3424664_3443778_3443892_3457620_3457694_3460262_3460337_3465596_3465696_3477694_3477796_3478845_3478934_3479218
H1_mix_00049256	chr2	+	677	4	FSM	ENSG00000171853.16	ENST00000461577.5	677	4	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_2	6.94422221866655	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCAAGAAACGCAGTGGTA	33	False	NA	NA	False	NA	NA	NA	3459930	3478916	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_3460337_3465596_3465696_3477694_3477796_3478845
H1_mix_00049257	chr2	+	561	3	FSM	ENSG00000171853.16	ENST00000489032.5	561	3	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_2	8.5	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATCCTGTGCTCTGGTGT	384	False	NA	NA	False	NA	NA	NA	3460281	3478101	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_3460337_3465596_3465696_3477694
H1_mix_00049258	chr2	+	720	4	FSM	ENSG00000171853.16	ENST00000469400.1	720	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	74.1230208654654	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTCTGCTGCGTGTCTTC	NA	False	NA	14	True	AATAAA	-15	NA	3472420	3479567	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_3472603_3477694_3477796_3478845_3478934_3479218
H1_mix_00049260	chr2	+	368	1	FSM	ENSG00000271868.1	ENST00000607415.1	473	1	161	-56	161	56	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTCAGCTCTTACTCT	NA	False	NA	NA	False	AAGAAA	-40	NA	3497116	3497484	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_3497100_3497500
H1_mix_00049261	chr2	+	881	2	FSM	ENSG00000235078.1	ENST00000450917.1	974	2	93	0	93	0	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAGAATCTGTTTAGATG	NA	False	NA	NA	False	NA	NA	NA	3519367	3523197	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_3519957_3522905
H1_mix_00049268	chr2	+	1140	6	FSM	ENSG00000171863.15	ENST00000462576.5	907	6	-274	41	-209	0	multi-exon	FALSE	canonical	3	7626	junction_5	1643.95588748604	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAACAAAAATGACTAAAT	NA	False	NA	NA	False	NA	NA	NA	3575050	3580878	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_3575685_3575816_3575889_3576486_3576631_3577709_3577775_3580109_3580261_3580804
H1_mix_00049269	chr2	+	1039	7	FSM	ENSG00000171863.15	ENST00000403564.5	764	7	-274	-1	-209	0	multi-exon	FALSE	canonical	3	169	junction_1	4209.19084662757	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTCAGTTATGTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	3575050	3580920	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_3575449_3575591_3575685_3575816_3575889_3576486_3576631_3577709_3577775_3580109_3580261_3580804
H1_mix_00049270	chr2	+	987	5	FSM	ENSG00000171863.15	ENST00000407445.8	987	5	0	0	0	0	multi-exon	FALSE	canonical	3	10507	junction_2	620.005241913324	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAGACTCTTTCTGTGGT	-9	True	NA	NA	False	NA	NA	NA	3575344	3580475	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_3575685_3575816_3575889_3576486_3576631_3577709_3577775_3580109
H1_mix_00049271	chr2	+	5429	2	FSM	ENSG00000171863.15	ENST00000481006.1	5429	2	0	0	0	0	multi-exon	FALSE	canonical	3	11428	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTTTCAGTTATGTTT	4	True	NA	NA	False	AATAAA	-18	NA	3575357	3580918	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_3575685_3575816
H1_mix_00049280	chr2	+	2892	2	Antisense	novelGene_ENSG00000226506.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	99	junction_1	0	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATAAATTGGTATTGA	-9	True	NA	-18	True	NA	NA	NA	7876636	7892319	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_+_7878482_7891272
H1_mix_00049281	chr2	+	3020	3	Antisense	novelGene_ENSG00000226506.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	58	junction_1	16	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATAAATTGGTATTGA	-9	True	NA	-18	True	NA	NA	NA	7876636	7892319	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_+_7878482_7883431_7883560_7891272
H1_mix_00049282	chr2	+	1299	3	FSM	ENSG00000115738.10	ENST00000396290.2	1299	3	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	0.5	192	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCGAGTGGTTTTTAAGAT	-1	True	NA	NA	False	AATAAA	-25	NA	8682055	8684461	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_8682514_8682842_8682907_8683684
H1_mix_00049284	chr2	+	5576	27	FSM	ENSG00000151693.11	ENST00000315273.4	5582	27	6	0	6	0	multi-exon	FALSE	canonical	3	35	junction_22	10.5393739077264	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTTTTAATGTTTTTA	-21	True	NA	18	True	AATAAA	-21	NA	9206770	9405683	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_9207231_9279316_9279390_9297299_9297446_9318523_9318599_9320287_9320338_9323120_9323251_9327825_9327912_9334737_9334814_9335092_9335180_9344531_9344636_9344730_9344801_9350807_9350896_9356046_9356096_9356178_9356346_9358755_9358890_9368424_9368520_9374754_9374945_9376907_9376994_9378943_9379060_9380740_9380809_9385244_9385359_9388293_9388547_9393481_9393648_9400022_9400073_9400741_9400831_9401273_9401397_9403252
H1_mix_00049285	chr2	+	2030	13	NIC	ENSG00000151693.11	novel	5582	27	NA	NA	82	609	combination_of_known_splicesites	FALSE	canonical	3	8	junction_3	18.1383571472171	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTGATTTAAGGAATTT	16	False	NA	NA	False	GATAAA	-23	NA	9206893	9356912	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_9207231_9279316_9279390_9297299_9297446_9320287_9320338_9323120_9323251_9327825_9327912_9334737_9334814_9335092_9335180_9344531_9344636_9344730_9344801_9350807_9350896_9356046_9356096_9356178
H1_mix_00049286	chr2	+	335	3	FSM	ENSG00000151693.11	ENST00000471687.1	611	3	276	0	276	0	multi-exon	FALSE	canonical	3	60	junction_1	2	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGACGGGCAATGACGTC	NA	False	NA	NA	False	NA	NA	NA	9350734	9356303	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_9350896_9356046_9356096_9356178
H1_mix_00049287	chr2	+	871	5	FSM	ENSG00000119203.14	ENST00000475482.5	871	5	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_1	419.539256208522	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACCCTCTGGCTGTGGCGC	-21	True	NA	NA	False	NA	NA	NA	9423650	9432688	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_9424053_9428764_9428829_9429922_9430021_9430751_9430881_9432510
H1_mix_00049288	chr2	+	2262	18	FSM	ENSG00000119203.14	ENST00000238112.8	2259	18	-3	0	0	0	multi-exon	FALSE	canonical	3	784	junction_10	109.390763322805	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTTACTTTTAATGTC	-21	True	NA	24	True	AATAAA	-23	NA	9423650	9473101	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_9423824_9428764_9428829_9429922_9430021_9430751_9430881_9432510_9432689_9433870_9433961_9436210_9436362_9440490_9440667_9441817_9441977_9443514_9443662_9448197_9448351_9452912_9453022_9455658_9455758_9456932_9457028_9459530_9459619_9467706_9467777_9471342_9471440_9472915
H1_mix_00049293	chr2	+	711	1	FSM	ENSG00000271855.1	ENST00000607241.1	877	1	166	0	166	0	mono-exon	FALSE	NA	NA	NA	NA	NA	602	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTGCTGTTTTATTTAG	70	False	NA	19	True	AATAAA	-22	NA	9556064	9556775	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_9556100_9556800
H1_mix_00049295	chr2	+	681	6	FSM	ENSG00000115750.17	ENST00000469895.5	681	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	31.0251510874645	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCATCACAATCAGGTAAAAA	64	False	NA	NA	False	NA	NA	NA	9843584	9868416	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_9843744_9845219_9845319_9849372_9849461_9851540_9851639_9854325_9854422_9868275
H1_mix_00049297	chr2	+	3587	16	FSM	ENSG00000134317.18	ENST00000324907.14	3568	16	-19	0	-19	0	multi-exon	FALSE	canonical	2	10	junction_8	5.78350143847902	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCATTTCCTGTTTTTC	5	True	NA	11	True	ATTAAA	-22	NA	9951673	10002277	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_9951854_9954914_9955102_9958785_9958857_9961045_9961437_9962454_9962532_9963885_9964043_9964234_9964347_9965286_9965382_9986123_9986283_9990695_9990748_9992006_9992147_9993206_9993245_9995878_9995971_9996315_9996402_9998964_9999030_10000592
H1_mix_00049300	chr2	+	950	4	FSM	ENSG00000171848.16	ENST00000459969.5	787	4	-428	265	-44	0	multi-exon	FALSE	canonical	3	1074	junction_2	44.9221548904324	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTTTCCAAAACATCTT	1849	False	NA	NA	False	AGTAAA	-11	NA	10122283	10123852	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_10122898_10122982_10123058_10123386_10123531_10123735
H1_mix_00049306	chr2	+	2043	1	FSM	ENSG00000243819.4	ENST00000607781.1	1756	1	-338	51	-338	-51	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTAAGTGTTTGTAAAAT	NA	False	NA	NA	False	TATAAA	-36	NA	10690005	10692048	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_10690000_10692000
H1_mix_00049309	chr2	+	1779	6	FSM	ENSG00000162976.13	ENST00000441908.6	1784	6	-4	9	-4	5	multi-exon	FALSE	canonical	3	25	junction_5	56.8422378166096	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGTCTTAAAACTGTCAA	NA	False	NA	10	True	AATAAA	-21	NA	11155367	11178861	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_11155690_11160465_11160549_11160624_11160695_11164203_11164262_11171924_11172046_11177736
H1_mix_00049310	chr2	+	928	8	FSM	ENSG00000162976.13	ENST00000445921.5	928	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	68.4975792809274	2656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGACTTGAAAGAAAGAGC	-23	True	NA	NA	False	AGTAAA	-33	NA	11155430	11177957	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_11155690_11160465_11160549_11160624_11160695_11164203_11164262_11171924_11172046_11172750_11172825_11174967_11175010_11177736
H1_mix_00049311	chr2	+	1717	7	FSM	ENSG00000162976.13	ENST00000295083.8	1717	7	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_5	32.8312182059833	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCTGAGTCTTAAAACT	13	True	NA	5	True	AATAAA	-16	NA	11155466	11178856	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_11155690_11160465_11160549_11160624_11160695_11164203_11164262_11171924_11172046_11174967_11175010_11177736
H1_mix_00049314	chr2	+	8484	33	NNC	ENSG00000196208.14	novel	8444	32	NA	NA	482	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	28.7200251349124	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTTTGTTGGTGAGTA	5	True	NA	12	True	AATAAA	-15	NA	11482822	11642786	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_11482964_11556453_11556772_11562462_11562583_11566479_11566657_11576352_11576536_11578296_11578432_11580703_11580833_11585160_11585275_11585761_11585906_11588745_11588932_11592775_11593127_11595250_11595380_11596110_11596240_11597780_11597979_11598679_11598861_11600799_11600996_11602405_11602543_11610687_11611028_11612494_11612611_11615090_11615291_11616630_11616721_11618287_11618920_11620904_11621008_11625153_11625313_11626961_11627105_11629947_11630110_11631908_11632114_11632888_11633064_11634130_11634350_11635269_11635406_11637715_11637917_11638670_11638810_11640290
H1_mix_00049316	chr2	+	1641	7	NNC	ENSG00000196208.14	novel	8444	32	NA	NA	484	7	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_4	14.8856754409511	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGCTCCAAGGGTTGTT	7	True	NA	16	True	AATAAA	-24	NA	11482824	11581272	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_11482964_11556453_11556772_11562462_11562583_11566479_11566657_11576352_11576536_11578296_11578432_11580703
H1_mix_00049317	chr2	+	8444	32	FSM	ENSG00000196208.14	ENST00000234142.9	8444	32	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	28.5442132906643	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTTTGTTGGTGAGTA	7	False	NA	12	True	AATAAA	-15	NA	11556352	11642786	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_11556772_11562462_11562583_11566479_11566657_11576352_11576536_11578296_11578432_11580703_11580833_11585160_11585275_11585761_11585906_11588745_11588932_11592775_11593127_11595250_11595380_11596110_11596240_11597780_11597979_11598679_11598861_11600799_11600996_11602405_11602543_11610687_11611028_11612494_11612611_11615090_11615291_11616630_11616721_11618287_11618920_11620904_11621008_11625153_11625313_11626961_11627105_11629947_11630110_11631908_11632114_11632888_11633064_11634130_11634350_11635269_11635406_11637715_11637917_11638670_11638810_11640290
H1_mix_00049322	chr2	+	4345	3	FSM	ENSG00000071575.12	ENST00000155926.9	4344	3	-1	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	13	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGGAGTCTGGAAAATGA	-25	True	NA	77	True	AATAAA	-22	NA	12716934	12742734	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_12718578_12723259_12723553_12740325
H1_mix_00049323	chr2	+	2778	3	FSM	ENSG00000071575.12	ENST00000381465.2	2778	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	147.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGGAGTCTGGAAAATGA	-25	True	NA	77	True	AATAAA	-22	NA	12716934	12742734	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_12717011_12723259_12723553_12740325
H1_mix_00049325	chr2	+	830	3	FSM	ENSG00000071575.12	ENST00000405331.3	830	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	136.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTCATTTAGAAGATGA	-1	True	NA	17	True	AATAAA	-23	NA	12718237	12724825	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_12718578_12723259_12723553_12724628
H1_mix_00049328	chr2	+	2701	26	FSM	ENSG00000079785.16	ENST00000676916.1	2504	26	-186	-11	-73	11	multi-exon	FALSE	canonical	3	24	junction_1	344.301207665614	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTGTCTTATTTTAAAG	95	False	NA	22	True	AATAAA	-25	NA	15591659	15631112	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_15591950_15595146_15595197_15595489_15595554_15596733_15596764_15597374_15597472_15599668_15599717_15602547_15602632_15603191_15603276_15603813_15603891_15604436_15604510_15605949_15606027_15606149_15606265_15607174_15607314_15613223_15613285_15617243_15617343_15618180_15618271_15620207_15620397_15621064_15621117_15623435_15623583_15627053_15627146_15628444_15628518_15628637_15628711_15628796_15628840_15629601_15629698_15629989_15630111_15630775
H1_mix_00049329	chr2	+	2475	26	FSM	ENSG00000079785.16	ENST00000678137.1	2451	26	-22	-2	0	2	multi-exon	FALSE	canonical	1	12	junction_18	343.614891411883	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGAAGGTTTGTGTCTT	281	False	NA	13	True	AATAAA	-16	NA	15591845	15631103	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_15591950_15595144_15595197_15595489_15595554_15596733_15596764_15597374_15597472_15599668_15599717_15602547_15602632_15603191_15603276_15603813_15603891_15604436_15604510_15605949_15606027_15606149_15606265_15607174_15607314_15613223_15613285_15617243_15617343_15618180_15618271_15620207_15620397_15621064_15621117_15623468_15623583_15627053_15627146_15628444_15628518_15628637_15628711_15628796_15628840_15629601_15629698_15629989_15630111_15630775
H1_mix_00049335	chr2	+	6927	14	FSM	ENSG00000178295.15	ENST00000381254.7	9957	14	0	3030	0	-3025	multi-exon	FALSE	canonical	3	20	junction_1	13.8918050850388	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATACAATCTCCGTCT	-7	True	NA	NA	False	ATTAAA	-15	NA	17754137	17785916	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_17754346_17759928_17760105_17761395_17761583_17764896_17765074_17766578_17766690_17768737_17768812_17771195_17771288_17772633_17772785_17773095_17773133_17773218_17773300_17774270_17774402_17778001_17778064_17779977_17780122_17780620
H1_mix_00049336	chr2	+	2362	3	FSM	ENSG00000170745.12	ENST00000304101.9	2341	3	-21	0	-21	0	multi-exon	TRUE	canonical	3	115	junction_1	2	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTCTTGGTTGTATGTT	-13	True	NA	20	True	AATAAA	-20	NA	17878645	17932958	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_17878807_17917679_17917872_17930949
H1_mix_00049337	chr2	+	1798	2	NNC	ENSG00000170745.12	novel	2341	3	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTCTTGGTTGTATGTT	-3	True	NA	20	True	AATAAA	-20	NA	17878655	17932958	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_17878807_17931311
H1_mix_00049338	chr2	+	1726	2	NNC	ENSG00000170745.12	novel	2341	3	NA	NA	11	0	at_least_one_novel_splicesite	TRUE	canonical	2	5	junction_1	0	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTCTTGGTTGTATGTT	19	True	NA	20	True	AATAAA	-20	NA	17878677	17932958	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_17878807_17931361
H1_mix_00049342	chr2	+	3017	7	FSM	ENSG00000119771.15	ENST00000288548.5	3043	7	0	26	0	-26	multi-exon	FALSE	canonical	3	11	junction_3	3.53160335006952	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTCTCTGTAGGAGTAA	NA	False	NA	NA	False	AATAAA	-21	NA	23642391	23697906	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_23642851_23684398_23684538_23691673_23691877_23693268_23693529_23695622_23695822_23695950_23696134_23696332
H1_mix_00049344	chr2	+	245	1	ISM	ENSG00000205639.12	ENST00000495018.1	1156	6	5513	77	922	-77	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGCTCCCCCTCTGGTTT	8337	False	NA	NA	False	NA	NA	NA	24018411	24018656	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_24018400_24018700
H1_mix_00049347	chr2	+	935	4	FSM	ENSG00000119782.14	ENST00000380986.9	925	4	-10	0	0	0	multi-exon	FALSE	canonical	3	366	junction_3	157.442758557586	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTCCATCCTTATTTT	3	True	NA	14	True	AATAAA	-19	NA	24049730	24063681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_24049887_24053901_24053950_24060813_24060927_24063063
H1_mix_00049348	chr2	+	1055	5	NIC	ENSG00000119782.14	novel	1137	6	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	111	junction_3	246.27360292975	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTCCATCCTTATTTT	11	True	NA	14	True	AATAAA	-19	NA	24049699	24063681	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_24049887_24053901_24053950_24054103_24054193_24060813_24060927_24063063
H1_mix_00049349	chr2	+	953	5	FSM	ENSG00000119782.14	ENST00000452109.1	953	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	267.19316514462	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGACAAACTCCTGTCCA	43	False	NA	4	True	AATAAA	-9	NA	24049770	24063671	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_24049887_24053901_24053950_24054472_24054541_24060813_24060927_24063063
H1_mix_00049352	chr2	+	7509	24	NIC	ENSG00000084676.16	novel	7381	23	NA	NA	0	71	combination_of_known_junctions	FALSE	canonical	3	71	junction_1	25.1445725239108	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCTTGAGGGGTTCTAAC	-8	True	NA	NA	False	NA	NA	NA	24491253	24770773	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_24491603_24564294_24564431_24584475_24584561_24643965_24644123_24658660_24658767_24665748_24665916_24673365_24673464_24682950_24683129_24691480_24691661_24693251_24693348_24697657_24697799_24705085_24705234_24706567_24707889_24710930_24711112_24726588_24726707_24728307_24728477_24729500_24729816_24739431_24739534_24741783_24742187_24751981_24752157_24757972_24758157_24762686_24762777_24768078_24768136_24768220
H1_mix_00049353	chr2	+	7381	23	FSM	ENSG00000084676.16	ENST00000348332.8	7381	23	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_22	33.8249321219992	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCTCAAAGTCATCCTGA	-8	True	NA	NA	False	AATAAA	-18	NA	24491253	24770702	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_24491603_24564294_24564431_24584475_24584561_24643965_24644123_24658660_24658767_24665748_24665916_24673365_24673464_24682950_24683129_24691480_24691661_24693251_24693348_24697657_24697799_24705085_24705234_24706567_24707889_24710930_24711112_24726588_24726707_24728307_24728477_24729500_24729816_24739431_24739534_24741783_24742187_24751981_24752157_24757972_24758157_24762686_24762777_24768220
H1_mix_00049354	chr2	+	6698	20	NIC	ENSG00000084676.16	novel	7381	23	NA	NA	31	-116	combination_of_known_splicesites	FALSE	canonical	1	1	junction_14	49.2147760619256	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCATGGGTTGCCTCTTCA	23	False	NA	3	True	AATAGA	-14	NA	24491284	24770586	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_24491603_24643965_24644123_24658660_24658767_24665748_24665916_24673365_24673464_24682950_24683129_24691480_24691661_24693251_24693348_24697657_24697799_24705085_24705234_24706567_24707889_24710930_24711112_24726588_24726707_24728307_24728477_24739431_24739534_24741783_24742187_24751981_24752157_24757972_24758157_24762686_24762777_24768220
H1_mix_00049355	chr2	+	7344	26	NIC	ENSG00000084676.16	novel	7381	23	NA	NA	195	-125	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	47.1039021738115	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAACAACCTCATGGGTT	187	False	NA	-6	True	AATAGA	-5	NA	24491448	24770577	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_24491603_24554388_24554574_24556014_24556056_24564294_24564431_24584475_24584561_24643965_24644123_24658660_24658767_24665748_24665916_24673365_24673464_24682950_24683129_24691480_24691661_24693251_24693348_24697657_24697799_24705085_24705234_24706567_24707889_24710930_24711112_24726588_24726707_24728307_24728477_24729500_24729816_24739431_24739534_24741783_24742187_24751981_24752157_24757972_24758157_24762686_24762777_24768078_24768136_24768220
H1_mix_00049356	chr2	+	6952	22	FSM	ENSG00000084676.16	ENST00000288599.9	6952	22	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	18.1026300691226	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCTCAAAGTCATCCTGA	8282	False	NA	NA	False	AATAAA	-18	NA	24584476	24770702	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_24584561_24643965_24644123_24658660_24658767_24665748_24665916_24673365_24673464_24682950_24683129_24691480_24691661_24693251_24693348_24697657_24697799_24705085_24705234_24706567_24707889_24710930_24711112_24726588_24726707_24728307_24728477_24729500_24729816_24739431_24739534_24741783_24742187_24751981_24752157_24757972_24758157_24762686_24762777_24768078_24768136_24768220
H1_mix_00049360	chr2	+	4106	8	FSM	ENSG00000138092.11	ENST00000380834.7	4106	8	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	55.8898333276076	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTACGTGGTGCTGGTGGTG	-17	True	NA	28	True	AATAAA	-19	NA	24793424	24822376	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_24793502_24793851_24793966_24799674_24799845_24814375_24814494_24815496_24815757_24816645_24816818_24817669_24817842_24819353
H1_mix_00049361	chr2	+	4085	8	FSM	ENSG00000138092.11	ENST00000260662.2	4085	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	61.7341237956475	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTACGTGGTGCTGGTG	20	True	NA	25	True	AATAAA	-16	NA	24793461	24822373	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_24793521_24793851_24793966_24799674_24799845_24814375_24814494_24815496_24815757_24816645_24816818_24817669_24817842_24819353
H1_mix_00049367	chr2	+	635	3	NNC	ENSG00000157833.13	novel	4164	6	NA	NA	0	-10440	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	65	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGCTAATGGACTACCTT	-21	True	NA	18	True	ATTAAA	-20	NA	26173087	26177018	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_26173333_26176343_26176485_26176769
H1_mix_00049368	chr2	+	918	2	ISM	ENSG00000157833.13	ENST00000401533.7	4164	6	0	12647	0	-10442	5prime_fragment	FALSE	canonical	3	161	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTATGCTAATGGACTACC	-21	True	NA	16	True	ATTAAA	-18	NA	26173087	26177016	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_26173333_26176343
H1_mix_00049369	chr2	+	650	3	NNC	ENSG00000157833.13	novel	4164	6	NA	NA	0	-10442	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	67	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTATGCTAATGGACTACC	-21	True	NA	16	True	ATTAAA	-18	NA	26173087	26177016	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_26173333_26176343_26176485_26176752
H1_mix_00049375	chr2	+	2016	16	FSM	ENSG00000138029.14	ENST00000317799.10	1997	16	-19	0	0	0	multi-exon	FALSE	canonical	3	375	junction_2	46.4492076239077	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGTTTACCTCATTTTT	-2	True	NA	24	True	AATAAA	-17	NA	26244919	26290465	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_26244991_26254246_26254319_26254429_26254475_26263379_26263480_26269952_26269998_26273650_26273751_26277072_26277161_26278613_26278802_26279134_26279316_26279993_26280116_26282844_26282925_26283003_26283052_26284116_26284205_26284882_26284958_26285406_26285572_26289917
H1_mix_00049378	chr2	+	11005	3	NIC	ENSG00000138018.19	novel	8066	10	NA	NA	35021	0	intron_retention	FALSE	canonical	3	118	junction_2	4	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTCAGATTGTCTTCT	NA	False	NA	24	True	AATAAA	-31	NA	26381198	26395885	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_26385140_26386353_26386537_26389004
H1_mix_00049383	chr2	+	4400	4	FSM	ENSG00000115163.15	ENST00000233505.12	1299	4	-12	-3089	0	3089	multi-exon	FALSE	canonical	3	92	junction_2	217.663859093685	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGCCACTGAGTTGTTG	-5	True	NA	9	True	AATAAA	-12	NA	26786055	26797678	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_26786297_26792130_26792241_26793144_26793327_26793811
H1_mix_00049384	chr2	+	745	6	FSM	ENSG00000115163.15	ENST00000460030.1	745	6	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_5	176.595130170682	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTTTTGTGCACTTTT	27	False	NA	NA	False	AATAAA	-30	NA	26786142	26801067	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_26786297_26792130_26792241_26792755_26792834_26793144_26793327_26793811_26793894_26800928
H1_mix_00049386	chr2	+	2237	3	FSM	ENSG00000084764.12	ENST00000475633.5	1160	3	-8	-1069	-5	-619	multi-exon	FALSE	canonical	3	60	junction_2	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCTCTATCCCTCAGGC	-2	True	NA	NA	False	NA	NA	NA	26970652	27025290	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_26970803_27022211_27022340_27023331
H1_mix_00049387	chr2	+	1813	7	FSM	ENSG00000084764.12	ENST00000405074.7	1801	7	-12	0	9	0	multi-exon	FALSE	canonical	3	27	junction_4	15.0711276581711	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCCATGTGTCCCTCAAC	-9	True	NA	10	True	AATAAA	-18	NA	26970645	27027196	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_26970803_27022211_27022340_27023331_27023478_27024095_27024253_27025582_27025738_27025879_27026033_27026279
H1_mix_00049393	chr2	+	3265	16	FSM	ENSG00000084693.16	ENST00000487078.5	3261	16	-4	0	-4	0	multi-exon	FALSE	canonical	3	15	junction_13	153.191586656129	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTAGTTGCTTTGTATGT	-15	True	NA	19	True	AATAAA	-20	NA	27051641	27070622	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27051794_27052912_27053174_27053401_27053574_27053895_27054060_27054629_27054808_27055074_27055254_27055681_27056139_27056622_27056793_27057302_27057439_27058399_27058603_27059189_27059405_27067493_27067647_27068631_27068745_27069047_27069095_27069572_27069707_27070091
H1_mix_00049394	chr2	+	1863	7	FSM	ENSG00000084693.16	ENST00000489683.5	1850	7	-13	0	0	0	multi-exon	FALSE	canonical	3	325	junction_5	29.3995464817628	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATGTCAAACTGAGAATT	11	True	NA	NA	False	AAAAAG	-23	NA	27051667	27056464	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27051794_27052912_27053174_27053401_27053574_27053895_27054060_27054629_27054808_27055074_27055254_27055681
H1_mix_00049395	chr2	+	2392	11	FSM	ENSG00000084693.16	ENST00000323064.12	2382	11	-10	0	0	0	multi-exon	FALSE	canonical	3	315	junction_7	31.8684797252709	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGCCTCTCCTACGAC	11	True	NA	26	True	AATAAA	-18	NA	27051667	27059535	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27051794_27052912_27053174_27053401_27053574_27053895_27054060_27054629_27054808_27055074_27055254_27055681_27056139_27056622_27056793_27057302_27057439_27058399_27058603_27059189
H1_mix_00049398	chr2	+	2165	6	NIC	ENSG00000138030.13	novel	2411	8	NA	NA	11	6	intron_retention	FALSE	canonical	3	90	junction_1	40.5265345175232	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCAAAAAGTTCTAGTGAT	-14	True	NA	36	True	TATAAA	-33	NA	27086757	27100768	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_27087352_27096728_27096802_27097502_27097650_27099195_27099285_27099419_27099578_27099664
H1_mix_00049399	chr2	+	2243	7	NIC	ENSG00000138030.13	novel	2411	8	NA	NA	12	-21	intron_retention	FALSE	canonical	3	34	junction_2	59.713203453396	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAAATGCCCAGCATGAT	-13	True	NA	-2	True	GATAAA	-7	NA	27086758	27100730	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_27087352_27092331_27092449_27096728_27096802_27097502_27097650_27099195_27099285_27099419_27099578_27099664
H1_mix_00049401	chr2	+	1059	7	FSM	ENSG00000138085.18	ENST00000405489.7	1059	7	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_1	625.831557920251	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAGGCGCCCTGCCTTTA	23	True	NA	49	True	AATAAA	-37	NA	27212369	27217178	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27212608_27213176_27213299_27215320_27215393_27215473_27215546_27215631_27215754_27216522_27216621_27216843
H1_mix_00049404	chr2	+	7246	45	NNC	ENSG00000084774.14	novel	7286	44	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_28	131.363022961764	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGCTGAGTGTAGTAGAA	-18	True	NA	24	True	AATAAA	-17	NA	27217368	27243783	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_27217634_27217876_27218017_27221217_27221348_27222193_27222337_27222518_27222661_27222865_27223038_27223562_27223749_27223916_27224030_27224344_27224491_27224744_27224877_27225009_27225244_27225704_27225927_27226130_27226320_27226524_27226650_27226831_27226963_27231467_27231581_27231979_27232225_27232447_27232695_27233041_27233141_27233311_27233537_27233625_27233809_27234007_27234227_27234517_27234686_27235244_27235428_27235535_27235641_27236283_27236524_27236748_27236831_27237046_27237167_27237378_27237546_27237717_27237883_27238055_27238188_27238430_27238633_27239041_27239233_27239330_27239472_27239696_27239799_27240264_27240362_27240910_27240956_27241057_27241228_27241321_27241397_27241910_27242124_27242301_27242428_27242619_27242776_27242871_27242974_27243197_27243293_27243415
H1_mix_00049416	chr2	+	2358	15	FSM	ENSG00000115234.11	ENST00000233575.7	2357	15	-1	0	0	0	multi-exon	FALSE	canonical	3	955	junction_3	55.1195824308107	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCTAGTTCAGGATGAGT	0	True	NA	NA	False	TATAAA	-14	NA	27370614	27377535	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27370807_27371268_27371344_27372622_27372741_27373246_27373312_27373860_27373972_27374084_27374176_27374345_27374434_27374688_27374759_27375060_27375154_27375505_27375710_27375845_27375972_27376105_27376184_27376312_27376388_27376478_27376521_27376605
H1_mix_00049422	chr2	+	2176	18	FSM	ENSG00000115216.14	ENST00000379852.8	2176	18	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_1	290.169679509377	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTCGTGTGTTCGCGCCTT	5	True	NA	31	True	AATAAA	-20	NA	27428630	27442259	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27428732_27433253_27433484_27433672_27433796_27433988_27434091_27434470_27434561_27434721_27434763_27435132_27435228_27436752_27436837_27437046_27437106_27437261_27437361_27439765_27439899_27440402_27440509_27440651_27440703_27440804_27440941_27441126_27441181_27441266_27441331_27441566_27441623_27441707
H1_mix_00049423	chr2	+	2202	19	NNC	ENSG00000115216.14	novel	2176	18	NA	NA	0	26615	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	419.062033181629	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAACCAAAGAGAAAAGAC	5	True	NA	NA	False	AAAAAG	-13	NA	27428630	27468874	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_27428732_27433253_27433484_27433672_27433796_27433988_27434091_27434470_27434561_27434721_27434763_27435132_27435228_27436752_27436837_27437046_27437106_27437261_27437361_27439765_27439899_27440402_27440509_27440651_27440703_27440804_27440941_27441126_27441181_27441266_27441331_27441566_27441623_27441707_27442260_27468848
H1_mix_00049426	chr2	+	2664	11	FSM	ENSG00000115216.14	ENST00000460499.5	2561	11	-103	0	-103	0	multi-exon	FALSE	canonical	3	1291	junction_9	53.8316821212193	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCGTCGTGTGTTCGCG	6797	False	NA	27	True	AATAAA	-16	NA	27435478	27442255	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27436837_27437046_27437106_27437261_27437361_27439765_27439899_27440402_27440509_27440651_27440703_27440804_27440941_27441126_27441181_27441266_27441331_27441566_27441623_27441707
H1_mix_00049430	chr2	+	850	7	NIC	ENSG00000157992.12	novel	872	7	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	3	140	junction_6	149.323753412956	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTACTTGATTATGATT	0	True	NA	13	True	AATAAA	-14	NA	27442392	27444290	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_27442441_27442578_27442764_27442841_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444188
H1_mix_00049431	chr2	+	1022	6	ISM	ENSG00000157992.12	ENST00000288873.7	872	7	-32	6	-17	0	intron_retention	FALSE	canonical	3	286	junction_1	108.706209574246	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTACTTGATTATGATTC	145	False	NA	14	True	AATAAA	-15	NA	27442348	27444291	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_27442441_27442578_27442764_27442841_27442902_27443073_27443281_27443397_27443533_27443948
H1_mix_00049432	chr2	+	942	6	FSM	ENSG00000157992.12	ENST00000407293.5	942	6	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_5	155.519002054411	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTATGATTCCTTTTG	2	True	NA	20	True	AATAAA	-21	NA	27442445	27444297	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27442764_27442841_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444188
H1_mix_00049433	chr2	+	938	6	ISM	ENSG00000157992.12	ENST00000288873.7	872	7	66	6	1	0	3prime_fragment	FALSE	canonical	3	197	junction_5	136.181643403213	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTACTTGATTATGATTC	3	True	NA	14	True	AATAAA	-15	NA	27442446	27444291	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_27442764_27442841_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444185
H1_mix_00049438	chr2	+	3546	14	FSM	ENSG00000243943.10	ENST00000355467.6	3531	14	-15	0	-3	0	multi-exon	FALSE	canonical	3	157	junction_1	54.4706641637301	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGGTTCATGAATTAT	-30	True	NA	143	True	AATAAA	-25	NA	27583026	27623217	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27583143_27583657_27583717_27598066_27598255_27599582_27599679_27599969_27600054_27600690_27600816_27601355_27601443_27602462_27602562_27603139_27603308_27607844_27608040_27615167_27615270_27616261_27616325_27617472_27617572_27621152
H1_mix_00049439	chr2	+	3333	13	NIC	ENSG00000243943.10	novel	3417	14	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	3	31	junction_1	77.2986182857681	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTCCAGTGTTCTTTG	-2	True	NA	20	True	AATAAA	-14	NA	27583054	27623094	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_27583143_27598069_27598255_27599582_27599679_27599969_27600054_27600690_27600816_27601355_27601443_27602462_27602562_27603139_27603308_27607844_27608040_27615167_27615270_27616261_27616325_27617472_27617572_27621152
H1_mix_00049440	chr2	+	2496	14	FSM	ENSG00000198522.14	ENST00000264718.7	2496	14	0	0	0	0	multi-exon	FALSE	canonical	3	653	junction_11	54.1552665897628	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTAATTTTAATGTTCTA	446	False	NA	7	True	AATAAA	-17	NA	27628995	27651508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27629170_27629858_27629953_27631026_27631067_27631833_27631901_27632632_27632671_27634845_27634925_27635139_27635235_27638209_27638256_27638884_27639032_27640042_27640126_27641239_27641280_27642428_27642520_27647835_27647944_27650114
H1_mix_00049444	chr2	+	522	4	FSM	ENSG00000243147.8	ENST00000296102.8	508	4	-13	-1	-11	0	multi-exon	FALSE	canonical	3	995	junction_3	522.099820170647	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTATTGTGTCTTAG	-32	True	NA	13	True	AATAAA	-15	NA	27771705	27779734	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27771800_27772673_27772693_27774423_27774531_27779432
H1_mix_00049446	chr2	+	729	3	FSM	ENSG00000243147.8	ENST00000483992.5	729	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	630	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTGTGCTATTGTGTCT	-13	True	NA	10	True	AATAAA	-12	NA	27771974	27779731	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27772386_27772673_27772693_27779432
H1_mix_00049447	chr2	+	587	4	FSM	ENSG00000243147.8	ENST00000476552.1	587	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	460.8198008863	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTTTATAGCCCTTAAT	202	False	NA	-24	True	NA	NA	NA	27772189	27779697	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27772386_27772673_27772693_27774423_27774531_27779432
H1_mix_00049448	chr2	+	1859	14	FSM	ENSG00000158019.21	ENST00000379632.6	1752	14	-107	0	-43	0	multi-exon	FALSE	canonical	3	12	junction_1	112.2232559303	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGTCTTCCCTCTGTGC	95	False	NA	21	True	ATTAAA	-27	NA	27890685	28338901	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27890843_27892382_27892449_27894532_27894685_27929831_27929909_27987992_27988088_28025225_28025421_28045724_28045800_28129270_28129381_28237201_28237302_28241322_28241394_28244779_28244863_28298337_28298492_28310081_28310154_28338449
H1_mix_00049449	chr2	+	1895	13	FSM	ENSG00000158019.21	ENST00000344773.6	1852	13	-43	0	-43	0	multi-exon	FALSE	canonical	3	11	junction_12	94.615743345856	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGTCTTCCCTCTGTGC	95	False	NA	21	True	ATTAAA	-27	NA	27890685	28338901	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27890843_27894532_27894685_27929831_27929909_27987992_27988088_28025225_28025421_28045724_28045800_28129270_28129381_28237201_28237302_28241322_28241394_28244779_28244863_28298337_28298492_28327273_28327448_28338449
H1_mix_00049450	chr2	+	1678	12	FSM	ENSG00000158019.21	ENST00000379624.6	1678	12	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_6	26.2860928569833	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGTCTTCCCTCTGTGC	-38	True	NA	21	True	ATTAAA	-27	NA	27890728	28338901	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27890843_27894532_27894685_27929831_27929909_27987992_27988088_28025225_28025421_28045724_28045800_28129270_28129381_28237201_28237302_28241322_28241394_28244779_28244863_28298337_28298492_28338449
H1_mix_00049451	chr2	+	1716	13	FSM	ENSG00000158019.21	ENST00000361704.6	1686	13	-30	0	0	0	multi-exon	FALSE	canonical	3	19	junction_12	89.6222008705928	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGTCTTCCCTCTGTGC	-4	True	NA	21	True	ATTAAA	-27	NA	27890762	28338901	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27890843_27894532_27894685_27929831_27929909_27987992_27988088_28025225_28025421_28045724_28045800_28129270_28129381_28237201_28237302_28241322_28241394_28244779_28244863_28298337_28298492_28310081_28310154_28338449
H1_mix_00049455	chr2	+	4916	8	FSM	ENSG00000213639.10	ENST00000395366.3	4916	8	0	0	0	0	multi-exon	FALSE	canonical	3	660	junction_6	69.9979591539231	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATAAATCTTTGCTTCTTT	-3	True	NA	21	True	ATTAAA	-21	NA	28751829	28802940	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_28752177_28776850_28776983_28778808_28779040_28781737_28781843_28783906_28783979_28788657_28788810_28793862_28793998_28799198
H1_mix_00049458	chr2	+	3506	18	FSM	ENSG00000163811.12	ENST00000407426.8	3506	18	0	0	0	0	multi-exon	FALSE	canonical	3	453	junction_7	54.0044211954032	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTGTCTTGTGGTATAT	-13	True	NA	18	True	AATAAA	-17	NA	28894666	28948219	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_28894924_28901986_28902125_28906459_28906582_28912589_28912711_28914068_28914209_28917892_28917996_28922918_28922984_28924981_28925154_28926467_28926555_28927568_28927701_28929578_28929711_28935520_28935608_28936921_28936954_28937930_28937995_28941460_28941575_28942311_28942382_28946449_28946500_28946599
H1_mix_00049460	chr2	+	2567	5	FSM	ENSG00000119801.13	ENST00000379520.7	2560	5	-7	0	-7	0	multi-exon	FALSE	canonical	3	8	junction_2	159.690912390154	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGCAGTACTGCTGCTT	NA	False	NA	22	True	AATAAA	-18	NA	30146933	30160533	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_30147063_30148244_30148542_30155849_30155911_30156627_30156793_30158618
H1_mix_00049462	chr2	+	2136	3	FSM	ENSG00000119801.13	ENST00000261353.9	2136	3	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_1	43.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGCAGTACTGCTGCTT	3	True	NA	22	True	AATAAA	-18	NA	30147006	30160533	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_30147063_30156627_30156793_30158618
H1_mix_00049474	chr2	+	5117	16	FSM	ENSG00000021574.13	ENST00000646571.1	5117	16	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	58.186901924364	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTCTTTACTTTTTTAC	7	True	NA	22	True	AATAAA	-13	NA	32063610	32157637	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_32064247_32087491_32087579_32089521_32089606_32114637_32114826_32115701_32115836_32116118_32116213_32126947_32127023_32128407_32128480_32136562_32136639_32136876_32136969_32137108_32137189_32141903_32141947_32143335_32143416_32144936_32145008_32147217_32147259_32154373
H1_mix_00049475	chr2	+	5204	17	FSM	ENSG00000021574.13	ENST00000621856.2	2084	17	-320	-2800	-94	0	multi-exon	FALSE	canonical	3	61	junction_1	48.4664429657263	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTTGGACTCTGAGTCAA	NA	False	NA	-98	True	AATGAA	-14	NA	32063461	32157482	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_32064247_32087494_32087579_32089521_32089606_32098795_32098892_32114637_32114826_32115701_32115836_32116118_32116213_32126947_32127023_32128407_32128480_32136562_32136639_32136876_32136969_32137108_32137189_32141903_32141947_32143335_32143416_32144936_32145008_32147217_32147259_32154373
H1_mix_00049479	chr2	+	1367	1	FSM	ENSG00000229816.1	ENST00000438163.1	2400	1	782	251	782	-251	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGACTGGATATTCTCAGT	NA	False	NA	NA	False	NA	NA	NA	32202381	32203748	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_32202400_32203700
H1_mix_00049488	chr2	+	2683	1	FSM	ENSG00000276517.1	ENST00000617415.1	3004	1	-32	353	-32	-353	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCCAGAGAGGTCCTTGTG	NA	False	NA	NA	False	NA	NA	NA	32526471	32529154	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_32526500_32529200
H1_mix_00049491	chr2	+	6220	34	NIC	ENSG00000049323.16	novel	6502	34	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_11	21.199086904466	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTACCTGAGAGTAATTGT	8	True	NA	6	True	AATAAA	-22	NA	32946929	33399363	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_32947819_32948874_32948946_33020908_33021207_33110581_33110752_33134792_33134961_33186855_33187081_33188576_33188852_33217551_33217655_33222079_33222152_33243661_33243785_33252676_33252845_33257442_33257512_33259587_33259611_33262721_33262822_33263293_33263393_33273655_33273782_33274964_33275091_33275800_33275924_33280038_33280159_33293159_33293283_33300450_33300574_33301521_33301645_33309433_33309557_33315143_33315270_33342837_33342964_33347366_33347511_33360596_33360780_33361428_33361516_33363389_33363519_33364215_33364357_33365332_33365504_33389183_33389307_33397132_33397283_33398363
H1_mix_00049492	chr2	+	6525	34	FSM	ENSG00000049323.16	ENST00000404816.7	6502	34	-23	0	-23	0	multi-exon	FALSE	canonical	3	35	junction_11	22.5942775368116	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTCCCCTAACATTCAT	8	True	NA	37	True	ATTAAA	-27	NA	32946929	33399509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_32947819_32948874_32948946_33020908_33021207_33110581_33110752_33134792_33134961_33186855_33187081_33188576_33188852_33217551_33217655_33222079_33222152_33243661_33243785_33252676_33252845_33257283_33257512_33259587_33259611_33262721_33262822_33263293_33263393_33273655_33273782_33274964_33275091_33275800_33275924_33280038_33280159_33293159_33293283_33300450_33300574_33301521_33301645_33309433_33309557_33315143_33315270_33342837_33342964_33347366_33347511_33360596_33360780_33361428_33361516_33363389_33363519_33364215_33364357_33365332_33365504_33389183_33389307_33397132_33397283_33398363
H1_mix_00049502	chr2	+	719	5	FSM	ENSG00000218739.10	ENST00000392061.6	695	5	-24	0	-4	0	multi-exon	FALSE	canonical	3	38	junction_4	70.8003354511827	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCTTGCCTCTTTTTGTT	-6	True	NA	18	True	AATAAA	-29	NA	37196483	37204739	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_37196521_37199703_37199820_37201047_37201093_37201641_37201727_37204303
H1_mix_00049506	chr2	+	1999	10	NIC	ENSG00000003509.16	novel	2184	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_5	103.11805532172	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTAGTGTACACTGGTT	12	True	NA	NA	False	AATAAA	-25	NA	37231688	37249160	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_37231761_37232105_37232267_37236095_37236177_37237756_37237868_37241577_37241638_37242634_37242694_37243862_37243974_37246051_37246196_37247455_37247630_37248134
H1_mix_00049507	chr2	+	1470	5	FSM	ENSG00000003509.16	ENST00000474257.5	1470	5	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_1	41.7814252988095	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGCAGGTAACAAAAGTCAA	NA	False	NA	6	True	AATAAA	-19	NA	37241938	37248420	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_37242694_37243862_37243974_37246051_37246196_37247455_37247630_37248134
H1_mix_00049519	chr2	+	729	5	FSM	ENSG00000188010.16	ENST00000644631.4	727	5	-4	2	-4	-2	multi-exon	FALSE	canonical	3	179	junction_4	21.242645786248	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCAGTCTGCTTATTATA	-32	True	NA	17	True	AATAAA	-12	NA	38875971	38882707	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_38876111_38880178_38880230_38880599_38880707_38881441_38881579_38882412
H1_mix_00049521	chr2	+	4002	6	FSM	ENSG00000231312.8	ENST00000667600.1	3990	6	-12	0	-12	0	multi-exon	FALSE	canonical	3	18	junction_5	19.5897932607774	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATTCTTGTACAAGTATT	NA	False	NA	-8	True	AATAAA	-8	NA	39437214	39602628	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_39437536_39453838_39453932_39454296_39454366_39516413_39516542_39518582_39518711_39599365
H1_mix_00049522	chr2	+	1086	4	FSM	ENSG00000231312.8	ENST00000445520.7	1091	4	5	0	1	0	multi-exon	FALSE	canonical	3	28	junction_3	17.5182444579612	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGGTAGCTCACACCTG	-4	True	NA	NA	False	TTTAAA	-20	NA	39437424	39475339	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_39437536_39453838_39453932_39454296_39454366_39474526
H1_mix_00049528	chr2	+	2493	7	FSM	ENSG00000162878.13	ENST00000294964.6	2490	7	-3	0	-3	0	multi-exon	FALSE	canonical	3	331	junction_2	25.1263473933903	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTCCCTAATGACAGTTT	-5	True	NA	31	True	AATAAA	-37	NA	42048017	42058517	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_42048839_42053238_42053362_42054035_42054308_42054940_42055021_42055285_42055394_42057220_42057395_42057602
H1_mix_00049529	chr2	+	2754	3	FSM	ENSG00000162878.13	ENST00000490302.1	1447	3	-1248	-59	-959	11	multi-exon	FALSE	canonical	3	370	junction_1	20	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAGTTTCTTAGGTTGTG	5660	False	NA	42	True	AATAAA	-43	NA	42053682	42058528	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_42055021_42055285_42055394_42057220
H1_mix_00049530	chr2	+	3568	22	FSM	ENSG00000143924.19	ENST00000402711.6	3568	22	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_3	127.280182659985	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTTGCCTTCTTTAAAA	-25	True	NA	22	True	AAGAAA	-24	NA	42169352	42330744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_42169637_42245504_42245688_42256500_42256631_42263177_42263307_42264705_42264732_42280849_42280974_42282822_42282973_42284633_42284704_42286268_42286380_42288226_42288323_42295124_42295260_42295380_42295517_42301240_42301393_42303103_42303230_42303314_42303447_42304483_42304552_42315961_42316051_42317426_42317525_42325466_42325555_42326153_42326253_42328885_42329017_42329733
H1_mix_00049533	chr2	+	4622	14	FSM	ENSG00000143924.19	ENST00000406175.3	4622	14	0	0	0	0	multi-exon	FALSE	canonical	3	611	junction_5	77.191454903112	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGTCTTAACTCTTTCTT	3788	False	NA	31	True	AATAAA	-27	NA	42285922	42332548	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_42286380_42288226_42288323_42295124_42295260_42295380_42295517_42301240_42301393_42303103_42303230_42303314_42303447_42304483_42304552_42315961_42316051_42317426_42317525_42325466_42325555_42326153_42326253_42328885_42329017_42329733
H1_mix_00049535	chr2	+	2202	14	FSM	ENSG00000057935.14	ENST00000407270.7	2202	14	0	0	0	0	multi-exon	FALSE	canonical	3	716	junction_11	290.676664142347	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGACTGTATGTCTTTG	-7	True	NA	19	True	AATAAA	-20	NA	42568516	42709544	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_42568774_42570436_42570505_42579106_42579201_42609457_42609585_42640172_42640237_42644126_42644245_42656199_42656303_42659762_42659863_42682400_42682590_42695764_42695840_42697775_42697835_42704193_42704319_42707902_42708055_42708873
H1_mix_00049536	chr2	+	5446	17	FSM	ENSG00000057935.14	ENST00000405094.2	5446	17	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_14	618.127259222363	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTTTATGCTGTTCT	-13	True	NA	15	True	AATAAA	-15	NA	42568631	42756946	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_42568774_42570436_42570505_42579106_42579201_42609457_42609585_42640172_42640237_42644126_42644245_42656199_42656303_42659762_42659863_42682400_42682590_42695764_42695840_42697775_42697835_42704193_42704319_42707902_42708055_42708873_42709097_42718987_42719075_42722888_42723036_42753373
H1_mix_00049537	chr2	+	2041	14	FSM	ENSG00000057935.14	ENST00000406911.5	2041	14	0	0	0	0	multi-exon	FALSE	canonical	3	736	junction_11	286.616499440418	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGACTGTATGTCTTTG	30	True	NA	19	True	AATAAA	-20	NA	42568674	42709544	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_42568774_42570436_42570505_42579106_42579201_42609457_42609585_42640172_42640237_42644126_42644245_42656199_42656303_42659762_42659863_42682400_42682590_42695764_42695840_42697775_42697835_42704196_42704319_42707902_42708055_42708873
H1_mix_00049540	chr2	+	2835	3	FSM	ENSG00000057935.14	ENST00000482875.5	2504	3	0	-331	0	0	multi-exon	FALSE	canonical	3	1566	junction_2	225	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGACTGTATGTCTTTG	6563	False	NA	19	True	AATAAA	-20	NA	42702306	42709544	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_42704319_42707902_42708055_42708873
H1_mix_00049543	chr2	+	6210	16	ISM	ENSG00000152527.14	ENST00000282406.9	6994	30	73325	0	18355	0	3prime_fragment	FALSE	canonical	2	19	junction_11	6.89734248340137	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGCATTATCTTTTGA	8034	False	NA	9	True	AATAAA	-17	NA	43710584	43767987	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_43712384_43720668_43720750_43726271_43726452_43729636_43729746_43731489_43731603_43738340_43738521_43740945_43741044_43742740_43742919_43743833_43743990_43745865_43745964_43753618_43753761_43757118_43757265_43758899_43759030_43762303_43762391_43764227_43764366_43765412
H1_mix_00049545	chr2	+	1140	6	FSM	ENSG00000138036.18	ENST00000406852.7	1133	6	-7	0	3	0	multi-exon	FALSE	canonical	3	98	junction_2	11.689311356962	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGAGCAGCATTTTATAT	-21	True	NA	NA	False	AATAAA	-18	NA	43774041	43795179	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_43774147_43776781_43776900_43783519_43783555_43787180_43787251_43789632_43789722_43794456
H1_mix_00049547	chr2	+	1346	13	FSM	ENSG00000138036.18	ENST00000605786.5	1346	13	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	27.976552682559	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTACCTCTAACATGTTT	19	True	NA	12	True	AATAAA	-13	NA	43774081	43809997	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_43774147_43776781_43776900_43783519_43783555_43787180_43787251_43789632_43789722_43794456_43794644_43795886_43795959_43796717_43796796_43800840_43800918_43801638_43801710_43804641_43804740_43805153_43805247_43809704
H1_mix_00049550	chr2	+	2608	6	FSM	ENSG00000138032.21	ENST00000282412.9	2608	6	0	0	0	0	multi-exon	TRUE	canonical	3	605	junction_5	157.618019274447	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTTGTACTTATTTTT	-16	True	NA	NA	False	AATAAA	-23	NA	44168874	44231472	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_44169275_44201185_44202046_44209209_44209328_44217966_44218079_44218479_44218538_44230412
H1_mix_00049551	chr2	+	1705	6	FSM	ENSG00000138032.21	ENST00000378540.8	1703	6	-2	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	391.2833244594	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGTACTGCTGTTAAC	-16	True	NA	NA	False	AATAAA	-21	NA	44168874	44244384	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_44169275_44201185_44202046_44209209_44209328_44217966_44218079_44218479_44218538_44244227
H1_mix_00049552	chr2	+	1713	5	FSM	ENSG00000138032.21	ENST00000345249.8	1713	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	388.87039936205	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTTGTACTTATTTTT	19	True	NA	NA	False	AATAAA	-23	NA	44168909	44231472	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_44169275_44209209_44209328_44217966_44218079_44218479_44218538_44230412
H1_mix_00049554	chr2	+	1593	11	FSM	ENSG00000143919.15	ENST00000378494.8	1512	11	-81	0	-81	0	multi-exon	FALSE	canonical	3	195	junction_3	34.2549266529648	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTGTATTAAATCCGCC	NA	False	NA	25	True	AATAAA	-29	NA	44361865	44772592	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_44362146_44372715_44372889_44390240_44390306_44704282_44704344_44706286_44706342_44707398_44707463_44715286_44715354_44743621_44743697_44754054_44754119_44766429_44766562_44772035
H1_mix_00049557	chr2	+	1287	9	NIC	ENSG00000143919.15	novel	594	8	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	93	junction_1	65.9117544524495	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTGTATTAAATCCGCC	6	True	NA	25	True	AATAAA	-29	NA	44676563	44772592	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_44676776_44704282_44704344_44706286_44706342_44707398_44707463_44715286_44715354_44743621_44743697_44754054_44754119_44766429_44766562_44772035
H1_mix_00049567	chr2	+	5115	20	FSM	ENSG00000068724.17	ENST00000319190.11	5095	20	-20	0	-20	0	multi-exon	FALSE	canonical	3	69	junction_12	12.684319719993	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCTGCTCATTTACACAGAA	259	False	NA	18	True	ATTAAA	-15	NA	46941203	47076123	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_46941726_46950362_46950527_46956838_46957008_46974972_46975104_46978791_46978908_46993449_46993529_46994356_46994515_46995135_46995200_47005921_47006060_47006640_47006725_47011330_47011436_47021861_47021980_47023407_47023466_47024286_47024360_47029223_47029385_47046314_47046432_47049948_47050047_47051745_47051881_47060768_47060972_47073701
H1_mix_00049572	chr2	+	5340	6	NIC	ENSG00000170802.17	novel	5437	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_5	7.03135833249878	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGCTTTCTCTGATCTT	NA	False	NA	10	True	AATAAA	-19	NA	48314636	48379295	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_48314815_48346200_48346752_48359046_48359148_48362642_48362708_48373291_48373361_48374919
H1_mix_00049573	chr2	+	5437	7	FSM	ENSG00000170802.17	ENST00000340553.8	5437	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	23.5984933605705	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGCTTTCTCTGATCTT	-11	True	NA	10	True	AATAAA	-19	NA	48314681	48379295	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_48314815_48328560_48328703_48346200_48346752_48359046_48359148_48362642_48362708_48373291_48373361_48374919
H1_mix_00049579	chr2	+	2470	14	FSM	ENSG00000068912.15	ENST00000185150.9	2446	14	-24	0	-1	0	multi-exon	FALSE	canonical	0	0	junction_6	110.932145153704	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTGTCATGTAGTCAATG	4	True	NA	22	True	AATAAA	-14	NA	53787019	53818796	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_53787373_53794344_53794450_53795932_53796014_53797514_53797593_53797731_53797796_53799046_53799082_53801396_53801621_53801712_53801843_53808298_53808461_53809213_53809274_53812948_53813074_53814542_53814621_53814859_53814936_53817897
H1_mix_00049580	chr2	+	2271	13	FSM	ENSG00000068912.15	ENST00000378239.5	2271	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	131.810127540422	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTATTAAATTTCTTTATT	22	True	NA	45	True	AATAAA	-37	NA	53787079	53818819	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_53787373_53794344_53794450_53795932_53796014_53797514_53797593_53797731_53797796_53799046_53799082_53801396_53801621_53801712_53801843_53809213_53809274_53812948_53813074_53814542_53814621_53814859_53814936_53817897
H1_mix_00049581	chr2	+	1114	7	FSM	ENSG00000170634.13	ENST00000607452.6	1262	7	0	148	0	-99	multi-exon	FALSE	canonical	3	18	junction_4	24.936029266015	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTTGTCTATGTTGAAT	-2	True	NA	17	True	AATAAA	-28	NA	53971112	54305152	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_53971322_53973712_53973811_54050957_54051051_54057238_54057361_54135452_54135470_54138638_54138749_54304687
H1_mix_00049585	chr2	+	1031	4	FSM	ENSG00000170634.13	ENST00000394666.7	993	4	-186	148	-85	-99	multi-exon	FALSE	canonical	3	26	junction_1	16.7597401199687	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTTGTCTATGTTGAAT	NA	False	NA	17	True	AATAAA	-28	NA	54115317	54305152	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_54115757_54135452_54135470_54138638_54138749_54304687
H1_mix_00049589	chr2	+	9323	35	NIC	ENSG00000115306.16	novel	9075	31	NA	NA	-670	107	combination_of_known_junctions	FALSE	canonical	3	387	junction_1	169.541341377217	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTTTGCATTTTTTATG	9	True	NA	-79	True	AAGAAA	-22	NA	54557723	54669781	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_54558888_54599091_54599244_54612160_54612335_54616206_54616299_54617607_54617689_54618077_54618194_54621399_54621513_54622299_54622488_54623478_54623597_54624803_54624963_54625931_54626235_54628096_54628251_54628932_54629804_54629891_54630030_54630854_54631612_54632565_54632769_54637712_54637804_54642982_54643130_54644322_54644587_54645228_54645454_54645927_54646018_54646193_54646476_54647130_54647262_54648985_54649191_54649614_54649990_54653608_54653854_54655069_54655209_54655913_54655999_54657849_54658047_54659153_54659267_54659935_54660000_54664452_54664692_54665914_54666089_54667603_54667647_54668350
H1_mix_00049590	chr2	+	3428	4	FSM	ENSG00000115306.16	ENST00000467371.1	3332	4	-96	0	-96	0	multi-exon	FALSE	canonical	3	864	junction_1	76.6913003903021	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACGGTGACTAGTTGTTG	9036	False	NA	21	True	ATTAAA	-14	NA	54662804	54669674	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_54664692_54665914_54666089_54667603_54667647_54668350
H1_mix_00049594	chr2	+	1310	5	FSM	ENSG00000143947.15	ENST00000478196.6	580	5	-326	-404	-69	0	multi-exon	FALSE	canonical	1	5160	junction_3	3043.72165284541	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAGACATGAACTAAC	-13	True	NA	10	True	NA	NA	NA	55232362	55235588	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_55232709_55232807_55232873_55233362_55233418_55234118_55234205_55234830
H1_mix_00049596	chr2	+	852	6	FSM	ENSG00000143947.15	ENST00000272317.11	785	6	-311	244	-55	0	multi-exon	FALSE	canonical	1	5160	junction_3	4046.06468559266	3103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTTGGGTTTTATTG	1	True	NA	-29	True	AATAAA	-16	NA	55232376	55235609	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_55232709_55232807_55232873_55233362_55233418_55234118_55234205_55234830_55234963_55235427
H1_mix_00049597	chr2	+	1159	4	FSM	ENSG00000143947.15	ENST00000495843.1	1159	4	0	0	0	0	multi-exon	FALSE	canonical	1	5160	junction_2	4916.23042132441	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTTGGGTTTTATTG	96	False	NA	-29	True	AATAAA	-16	NA	55232794	55235609	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_55232873_55233362_55233418_55234118_55234963_55235427
H1_mix_00049599	chr2	+	772	6	FSM	ENSG00000163001.12	ENST00000403007.4	759	6	-13	0	0	0	multi-exon	FALSE	canonical	3	249	junction_2	17.4287119432275	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTATGTATGTCGTGCAT	44	True	NA	NA	False	AATATA	-7	NA	55519717	55535914	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_55519917_55522101_55522167_55523720_55523823_55528877_55528993_55533872_55533961_55535711
H1_mix_00049603	chr2	+	1870	14	FSM	ENSG00000028116.18	ENST00000432057.2	1870	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	104.599716021201	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAAGGTAATTGGCTTT	43	False	NA	-76	True	NA	NA	NA	58046711	58159784	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_58046822_58048826_58048968_58058351_58058489_58084088_58084139_58084880_58084951_58086338_58086427_58088340_58088447_58089630_58089724_58123100_58123234_58131807_58131929_58135140_58135200_58139665_58139833_58146315_58146475_58159348
H1_mix_00049604	chr2	+	1773	13	FSM	ENSG00000028116.18	ENST00000340157.9	1773	13	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_1	33.7576123102463	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTCATAGAATAGTGTC	-4	True	NA	11	True	AATAAA	-19	NA	58046805	58159871	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_58046869_58048826_58048968_58084088_58084139_58084880_58084951_58086338_58086427_58088340_58088447_58089630_58089724_58123100_58123234_58131807_58131929_58135140_58135200_58139665_58139833_58146315_58146475_58159348
H1_mix_00049608	chr2	+	1182	7	FSM	ENSG00000233723.10	ENST00000422793.3	1187	7	0	5	0	0	multi-exon	FALSE	canonical	1	8	junction_1	15.0489940601431	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATCTTGGCATCTACTT	-4	True	NA	14	True	AATAAA	-17	NA	58428411	58931076	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_58428465_58461777_58461846_58656649_58656712_58850429_58850607_58924544_58924627_58925610_58925910_58930635
H1_mix_00049609	chr2	+	476	1	Intergenic	novelGene_681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCCCTTGATGTTTAATC	2728	False	NA	NA	False	NA	NA	NA	60417702	60418178	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_60417700_60418200
H1_mix_00049610	chr2	+	2204	2	Antisense	novelGene_ENSG00000228590.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATTGAGACCTGTCTCA	2764	False	NA	12	True	AATAAA	-26	NA	60417738	60426252	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_+_60417982_60424291
H1_mix_00049611	chr2	+	2293	3	Antisense	novelGene_ENSG00000228590.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	27	junction_1	31.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAGACCTGTCTCAGATA	2764	False	NA	16	True	AATAAA	-30	NA	60417738	60426256	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_+_60417982_60420067_60420153_60424291
H1_mix_00049612	chr2	+	2482	3	Antisense	novelGene_ENSG00000228590.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	37	junction_1	26.5	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGACCTGTCTCAGATAC	2767	False	NA	17	True	AATAAA	-31	NA	60417741	60426257	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_+_60417982_60419876_60420153_60424291
H1_mix_00049614	chr2	+	3469	21	NIC	ENSG00000115421.13	novel	7348	22	NA	NA	3	0	combination_of_known_junctions	TRUE	canonical	2	7	junction_6	39.7533331935826	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCTCTCCTTAGTCTA	16	True	NA	19	True	TTTAAA	-6	NA	60756270	60798468	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_60756350_60760133_60760296_60761740_60761808_60768469_60768552_60768780_60768891_60770457_60770512_60775033_60775124_60779636_60779776_60780706_60780780_60781884_60782006_60782685_60782771_60783155_60783210_60786946_60787067_60787510_60787621_60791760_60791883_60792128_60792290_60793626_60793716_60793970_60794192_60794709_60794776_60794963_60795021_60797061
H1_mix_00049615	chr2	+	3572	22	NIC	ENSG00000115421.13	novel	7348	22	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	27.606647462649	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCTCTCCTTAGTCTA	25	True	NA	19	True	TTTAAA	-6	NA	60756279	60798468	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_60756350_60760133_60760296_60761740_60761808_60768469_60768552_60768780_60768891_60770457_60770512_60771518_60771631_60775033_60775124_60779636_60779776_60780706_60780780_60781884_60782006_60782685_60782771_60783155_60783210_60786946_60787067_60787510_60787621_60791760_60791883_60792128_60792290_60793626_60793716_60793970_60794192_60794709_60794776_60794963_60795021_60797061
H1_mix_00049618	chr2	+	1016	2	ISM	ENSG00000162928.9	ENST00000401576.1	1108	3	162	10	4	4	3prime_fragment	FALSE	canonical	3	33	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTTTATAGTGGTGAC	3	True	NA	10	True	AATAAA	-20	NA	61017723	61019071	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_61017852_61018183
H1_mix_00049620	chr2	+	1381	9	NNC	ENSG00000162929.14	novel	2640	11	NA	NA	18	-3270	at_least_one_novel_splicesite	TRUE	canonical	3	13	junction_8	42.0221295866833	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTGTAAATGCTACTGT	-25	True	NA	NA	False	AATAAA	-40	NA	61065897	61086400	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_61066028_61068848_61068986_61070341_61070501_61071605_61071793_61073457_61073552_61076919_61077159_61081451_61081511_61083153_61083315_61086185
H1_mix_00049621	chr2	+	2598	10	ISM	ENSG00000162929.14	ENST00000402291.6	4578	22	27	34578	18	32	5prime_fragment	FALSE	canonical	3	99	junction_8	18.0868958771022	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATATTTCTCTTTATGTT	-25	True	NA	NA	False	AATAAA	-21	NA	61065897	61089702	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_61066028_61068848_61068986_61070341_61070501_61071605_61071793_61073457_61073552_61076919_61077159_61081451_61081511_61083153_61083315_61088158_61088246_61088357
H1_mix_00049622	chr2	+	2546	10	NNC	ENSG00000162929.14	novel	2640	11	NA	NA	30	32	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	40.0613726705278	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATATTTCTCTTTATGTT	-13	True	NA	NA	False	AATAAA	-21	NA	61065909	61089702	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_61065988_61068848_61068986_61070341_61070501_61071605_61071793_61073457_61073552_61076919_61077159_61081451_61081511_61083153_61083315_61088158_61088246_61088357
H1_mix_00049623	chr2	+	1862	12	NIC	ENSG00000162929.14	novel	4578	22	NA	NA	47	319	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	43.6011221328038	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTTCCAGCCAAACTAT	4	True	NA	NA	False	ATTAAA	-19	NA	61065926	61093683	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_61066028_61068848_61068986_61070341_61070501_61071605_61071793_61073457_61073552_61076919_61077159_61081451_61081511_61083153_61083315_61088158_61088246_61088357_61088469_61092463_61092588_61093280
H1_mix_00049627	chr2	+	995	5	NIC	ENSG00000237651.8	novel	879	4	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	80.521348100985	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATTTTTGTTTGTACAAA	NA	False	NA	-3	True	AATAAA	-1	NA	61145073	61164808	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_61145197_61159317_61159440_61162841_61162956_61163051_61163233_61164353
H1_mix_00049628	chr2	+	1117	6	NIC	ENSG00000237651.8	novel	565	5	NA	NA	-3	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	74.8053474024418	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAGGTACATCATATTCA	12	True	NA	21	True	AATAAA	-25	NA	61145126	61164832	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_61145197_61157861_61158013_61159317_61159440_61162841_61162956_61163051_61163233_61164353
H1_mix_00049634	chr2	+	3230	5	FSM	ENSG00000173209.23	ENST00000471542.5	1971	5	-1259	0	-9	0	multi-exon	FALSE	canonical	3	249	junction_2	66.2589616580278	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTAAAGCATTGTTTGAC	NA	False	NA	11	True	NA	NA	NA	61177408	61186912	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_61179172_61181319_61181406_61184711_61184801_61185501_61186498_61186616
H1_mix_00049642	chr2	+	5228	24	NIC	ENSG00000115504.15	novel	5165	25	NA	NA	-14	0	intron_retention	FALSE	canonical	3	19	junction_1	20.5359199346276	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGCTGCTACTTTCTTGC	2	True	NA	15	True	AATAAA	-24	NA	62705697	63046487	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_62706053_62706896_62707296_62747394_62747453_62764265_62764362_62771338_62771393_62826086_62826269_62831018_62831159_62859168_62859292_62864730_62864972_62874345_62874533_62942717_62942897_62943801_62943851_62948259_62949163_62955516_62955661_62979187_62979336_62987930_62988039_62990715_62990841_62993529_62993669_62993870_62993978_62996642_62996767_63037534_63037635_63038742_63038817_63045065_63045181_63045409
H1_mix_00049643	chr2	+	5106	23	FSM	ENSG00000115504.15	ENST00000431489.6	5105	23	-1	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	22.135803614346	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGCTGCTACTTTCTTGC	16	True	NA	15	True	AATAAA	-24	NA	62705711	63046487	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_62706053_62706896_62707296_62747394_62747453_62764265_62764362_62771338_62771393_62826086_62826269_62831018_62831159_62859168_62859292_62864730_62864972_62874345_62874533_62942717_62942897_62943801_62943851_62948259_62949163_62955516_62955661_62979187_62979336_62990715_62990841_62993529_62993669_62993870_62993978_62996642_62996767_63037534_63037635_63038742_63038817_63045065_63045181_63045409
H1_mix_00049649	chr2	+	1532	9	FSM	ENSG00000014641.21	ENST00000432309.6	1443	9	-192	103	1	0	multi-exon	FALSE	canonical	3	92	junction_1	1945.65974912753	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAACACATTTTAAAGATT	-13	True	NA	-90	True	NA	NA	NA	63588958	63607091	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_63589385_63594487_63594587_63595422_63595520_63597398_63597575_63599169_63599293_63604695_63604873_63605279_63605394_63605938_63606029_63606861
H1_mix_00049652	chr2	+	2076	11	FSM	ENSG00000169764.16	ENST00000467648.6	2057	11	-19	0	-2	0	multi-exon	FALSE	canonical	3	55	junction_1	1806.44199740816	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATTGTTTAATCTTAAAA	-13	True	NA	-80	True	NA	NA	NA	63840949	63891451	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_63841233_63842538_63842600_63856305_63856434_63857828_63857937_63882465_63882652_63883959_63884094_63885588_63885887_63886340_63886539_63887401_63887645_63890080_63890186_63891119
H1_mix_00049658	chr2	+	1707	10	FSM	ENSG00000169764.16	ENST00000678298.1	1699	10	-8	0	0	0	multi-exon	FALSE	canonical	2	30	junction_5	1704.75016814854	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCAATACTTTCCTTCTT	2	True	NA	NA	False	AATAGA	-41	NA	63841018	63891394	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_63841233_63856305_63856434_63857828_63857937_63882465_63882652_63883959_63884094_63885770_63885887_63886340_63886539_63887401_63887645_63890080_63890186_63891119
H1_mix_00049659	chr2	+	1948	11	FSM	ENSG00000169764.16	ENST00000678951.1	1948	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	2205.48297658359	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTTAACAGAAGCCTCAA	40	True	NA	-42	True	NA	NA	NA	63841156	63891489	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_63841233_63856305_63856434_63857549_63857719_63857828_63857937_63882465_63882652_63884026_63884094_63885588_63885887_63886340_63886539_63887401_63887645_63890080_63890186_63891119
H1_mix_00049661	chr2	+	4964	7	FSM	ENSG00000169764.16	ENST00000475550.5	4397	7	0	-567	0	567	multi-exon	FALSE	canonical	3	145	junction_1	1783.45523726651	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGCCTTTTAAAGTCTG	676	False	NA	NA	False	AATATA	-13	NA	63841850	63892129	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_63842205_63882465_63882652_63883959_63884094_63885588_63885887_63886340_63886539_63887401_63890186_63891119
H1_mix_00049663	chr2	+	2150	10	FSM	ENSG00000169764.16	ENST00000337130.10	2150	10	0	0	0	0	multi-exon	FALSE	canonical	3	2782	junction_1	729.256766920106	1553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTGTACACTGGTACT	2	True	NA	29	True	AATAAA	-13	NA	63841895	63891560	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_63842205_63856305_63856434_63857828_63857937_63882465_63882652_63883959_63884094_63885588_63885887_63886340_63886539_63887401_63887645_63890080_63890186_63891119
H1_mix_00049667	chr2	+	383	2	FSM	ENSG00000225889.10	ENST00000661002.1	2842	2	-22	2481	2	-2481	multi-exon	FALSE	canonical	3	24	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGCCAGTGGGGAGGTTTT	NA	False	NA	NA	False	NA	NA	NA	64228402	64229759	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_64228523_64229496
H1_mix_00049675	chr2	+	3998	9	NIC	ENSG00000119844.16	novel	4040	9	NA	NA	39	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_8	20.352748585879	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGCCTGGTGTCTTTGTA	-38	True	NA	NA	False	AATAAA	-16	NA	64524343	64593005	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_64524613_64551442_64553410_64567561_64567714_64569091_64569219_64569622_64569680_64572945_64573069_64579485_64579547_64585421_64585546_64591887
H1_mix_00049677	chr2	+	1526	6	NIC	ENSG00000119844.16	novel	2811	9	NA	NA	16297	-3	combination_of_known_junctions	FALSE	canonical	3	41	junction_5	23.8880723374658	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTAGCCTGGTGTCTTT	NA	False	NA	NA	False	AATAAA	-13	NA	64569172	64593002	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_64569219_64569622_64569680_64572945_64573069_64579485_64579547_64585421_64585546_64591887
H1_mix_00049679	chr2	+	2279	4	ISM	ENSG00000011523.14	ENST00000377990.7	5803	7	27	12460	-9	60	5prime_fragment	FALSE	canonical	3	73	junction_1	33.3466640010661	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACATTCTTAAAGCGGAAC	16	True	NA	75	True	NA	NA	NA	65056442	65074544	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_65056529_65069398_65069802_65071453_65072981_65074281
H1_mix_00049680	chr2	+	5795	7	NIC	ENSG00000011523.14	novel	5803	7	NA	NA	4	0	intron_retention	FALSE	canonical	3	58	junction_1	31.4094819370768	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATTTTTGGCTTGTGTTT	-7	True	NA	7	True	AATAAA	-16	NA	65056419	65087004	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_65056525_65069398_65069802_65071453_65072981_65074281_65074405_65077867_65077965_65082535_65082710_65083638
H1_mix_00049681	chr2	+	2249	4	NIC	ENSG00000011523.14	novel	5803	7	NA	NA	4	60	intron_retention	FALSE	canonical	3	58	junction_1	40.2740611312045	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACATTCTTAAAGCGGAAC	42	False	NA	75	True	NA	NA	NA	65056468	65074544	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_65056525_65069398_65069802_65071453_65072981_65074281
H1_mix_00049684	chr2	+	3413	4	Intergenic	novelGene_683	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	43	junction_3	47.3168985552613	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCATTGGTGCTTTGCT	NA	False	NA	24	True	ATTAAA	-16	NA	66244241	66271854	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_66244485_66246286_66246475_66258904_66259023_66268990
H1_mix_00049685	chr2	+	1096	4	Intergenic	novelGene_686	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	59	junction_3	41.555852643026	4446	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCATTGGTGCTTTGCT	NA	False	NA	24	True	ATTAAA	-16	NA	66244243	66271854	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_66244485_66246286_66246475_66258904_66259023_66271305
H1_mix_00049686	chr2	+	4773	3	Intergenic	novelGene_684	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	30	junction_2	64	486	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCTTTTAATTGAACAT	NA	False	NA	4	True	AATAAA	-11	NA	66244243	66254774	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_66244485_66246286_66246475_66250430
H1_mix_00049688	chr2	+	2918	3	NNC	ENSG00000289533.1	novel	821	3	NA	NA	-80	-6655	at_least_one_novel_splicesite	FALSE	canonical	3	400	junction_2	541.5	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGAATTTTTTCCTGT	NA	False	NA	14	True	AATAAA	-18	NA	67331800	67339973	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_67332063_67333952_67334151_67337515
H1_mix_00049689	chr2	+	1097	3	NNC	ENSG00000289533.1	novel	821	3	NA	NA	-77	-6655	at_least_one_novel_splicesite	FALSE	canonical	3	618	junction_2	432.5	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGAATTTTTTCCTGT	NA	False	NA	14	True	AATAAA	-18	NA	67331803	67339973	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_67332063_67333952_67334151_67339333
H1_mix_00049690	chr2	+	1269	4	NNC	ENSG00000289533.1	novel	821	3	NA	NA	-67	-6655	at_least_one_novel_splicesite	FALSE	canonical	3	88	junction_3	597.797624618901	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGAATTTTTTCCTGT	NA	False	NA	14	True	AATAAA	-18	NA	67331813	67339973	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_67332063_67333952_67334151_67337515_67337698_67339333
H1_mix_00049692	chr2	+	891	3	FSM	ENSG00000289533.1	ENST00000693757.1	821	3	-67	-3	-67	3	multi-exon	FALSE	canonical	3	44	junction_2	719.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTATGGTGATTTGTTAC	NA	False	NA	26	True	AATAAA	-22	NA	67331813	67346631	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_67332063_67333952_67334151_67346187
H1_mix_00049694	chr2	+	2958	6	FSM	ENSG00000143971.9	ENST00000644028.1	2946	6	-12	0	-10	0	multi-exon	FALSE	canonical	2	7	junction_4	64.4192517808147	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGTATAAATCTTATTTT	-11	True	NA	-21	True	NA	NA	NA	67397311	67412089	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_67397672_67399168_67399298_67399549_67399627_67402861_67402975_67405235_67405336_67409910
H1_mix_00049695	chr2	+	5496	5	ISM	ENSG00000143971.9	ENST00000272342.6	4948	6	974	-25	971	25	3prime_fragment	FALSE	canonical	3	158	junction_2	13.838352503098	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCATTTTGTGTCTCTGG	984	False	NA	4	True	TATAAA	-15	NA	67398306	67412114	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_67399298_67399549_67399627_67402861_67402975_67403224_67405336_67409910
H1_mix_00049702	chr2	+	5861	18	FSM	ENSG00000169604.21	ENST00000303714.9	5858	18	-3	0	0	0	multi-exon	FALSE	canonical	3	28	junction_17	31.4603061817889	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTTTTCTGGTTATTTG	-10	True	NA	14	True	AATAAA	-14	NA	69013175	69249327	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_69013652_69040043_69040116_69044741_69044814_69070646_69070729_69071753_69071788_69073021_69073102_69075589_69075659_69077407_69077489_69090858_69090920_69102841_69102941_69123016_69123087_69124564_69124644_69152168_69152265_69170247_69170290_69181785_69181882_69182492_69182661_69193334_69193416_69245224
H1_mix_00049703	chr2	+	2221	13	FSM	ENSG00000169604.21	ENST00000409829.7	2221	13	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_12	22.4739046204457	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGGTTGATACTTAGGC	18	False	NA	8	True	AATAAA	-12	NA	69013305	69146401	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_69013652_69040043_69040116_69044741_69044814_69070646_69070729_69071753_69071788_69073021_69073102_69075589_69075659_69077407_69077489_69090858_69090920_69102841_69102941_69123016_69123087_69124564_69124644_69145325
H1_mix_00049708	chr2	+	2166	13	FSM	ENSG00000196975.16	ENST00000394295.6	2651	13	-1	486	0	-486	multi-exon	FALSE	canonical	3	92	junction_5	25.7826114960365	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAAAAATTAGCCGGGTG	-1	True	NA	NA	False	ACTAAA	-2	NA	69742132	69826626	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_69742176_69781519_69781575_69788053_69788142_69804532_69804628_69806384_69806499_69807905_69807997_69810593_69810674_69812652_69812710_69816100_69816195_69818598_69818695_69819279_69819339_69820698_69820822_69825455
H1_mix_00049714	chr2	+	5549	6	FSM	ENSG00000059728.11	ENST00000264444.7	5549	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	4.42718872423573	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTCTTTCTGATGTTT	-1	True	NA	NA	False	AATAAA	-21	NA	69915108	69942945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_69915404_69916120_69916221_69921735_69921766_69935350_69935466_69937234_69937395_69938096
H1_mix_00049717	chr2	+	5339	6	FSM	ENSG00000116005.12	ENST00000433351.7	5339	6	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_4	38.160712781603	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGTCTTTTGCTTCTG	12	True	NA	14	True	AATAAA	-15	NA	70258136	70281185	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_70258277_70259359_70259567_70261211_70261387_70274958_70275171_70275513_70275667_70276733
H1_mix_00049720	chr2	+	882	7	FSM	ENSG00000124357.13	ENST00000443872.6	878	7	-4	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	92.4602016485411	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCTTTTTACAAAAACAAAC	-7	True	NA	-34	True	NA	NA	NA	71068587	71078585	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_71068713_71072640_71072752_71073481_71073595_71075554_71075643_71076603_71076702_71077557_71077637_71078317
H1_mix_00049721	chr2	+	2318	9	FSM	ENSG00000124357.13	ENST00000418807.7	2343	9	0	25	0	-25	multi-exon	FALSE	canonical	3	12	junction_1	82.3634286258167	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAATAATAAATAAAAA	-7	True	NA	NA	False	NA	NA	NA	71068587	71079780	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_71068713_71070740_71070840_71071685_71071828_71072640_71072752_71073481_71073595_71075554_71075643_71076603_71076702_71077557_71077637_71078317
H1_mix_00049722	chr2	+	2343	10	FSM	ENSG00000124357.13	ENST00000244204.11	2371	10	0	28	0	-25	multi-exon	FALSE	canonical	3	223	junction_1	17.8885438199983	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAATAATAAATAAAAA	0	True	NA	NA	False	NA	NA	NA	71068647	71079780	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_71068713_71070501_71070587_71070740_71070840_71071685_71071828_71072640_71072752_71073481_71073595_71075554_71075643_71076603_71076702_71077557_71077637_71078317
H1_mix_00049727	chr2	+	2400	5	FSM	ENSG00000124383.9	ENST00000498451.2	2068	5	-332	0	-332	0	multi-exon	FALSE	canonical	3	279	junction_4	17.6971042829046	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTCATCTCATTGACT	NA	False	NA	NA	False	ATTAAA	-21	NA	71130299	71139425	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_71130755_71132897_71133577_71133947_71134106_71134625_71134798_71138489
H1_mix_00049728	chr2	+	2498	11	FSM	ENSG00000124383.9	ENST00000244230.7	2164	11	-334	0	-332	0	multi-exon	FALSE	canonical	3	279	junction_4	31.9795246994073	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGCATCGATGACAGATA	NA	False	NA	16	True	AATAAA	-17	NA	71130299	71150101	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_71130755_71132897_71133577_71133947_71134106_71134625_71134798_71138489_71138632_71139794_71139863_71141231_71141370_71144427_71144539_71147998_71148107_71149222_71149454_71149865
H1_mix_00049732	chr2	+	6576	28	NIC	ENSG00000075292.19	novel	4233	18	NA	NA	8	0	combination_of_known_junctions	TRUE	canonical	3	144	junction_1	111.721226152929	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTGTGTTTGTGGCTGA	-17	True	NA	NA	False	AATAAA	-25	NA	71276568	71435058	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_71276755_71348752_71350272_71355718_71355781_71363152_71363192_71363953_71364253_71365428_71365707_71368381_71368529_71369882_71370006_71380221_71380281_71380512_71380566_71396140_71396192_71398700_71398773_71399558_71399646_71400111_71400181_71400477_71400519_71401955_71402088_71403869_71403999_71405600_71405643_71406127_71406263_71408121_71408248_71418601_71418640_71422813_71424039_71424649_71424716_71426459_71427415_71428546_71428652_71431326_71431429_71433164_71433284_71434741
H1_mix_00049733	chr2	+	4960	26	NIC	ENSG00000075292.19	novel	4233	18	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	132.305247061483	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTGTGTTTGTGGCTGA	18	True	NA	NA	False	AATAAA	-25	NA	71276603	71435058	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_71276755_71363152_71363192_71363953_71364253_71365428_71365707_71368381_71368529_71369882_71370006_71380221_71380281_71380512_71380566_71396140_71396192_71398700_71398773_71399558_71399646_71400111_71400181_71400477_71400519_71401955_71402088_71403869_71403999_71405600_71405643_71406127_71406263_71408121_71408248_71418601_71418640_71422813_71424039_71424649_71424716_71426459_71427415_71428546_71428652_71431326_71431429_71433164_71433284_71434741
H1_mix_00049734	chr2	+	4984	27	NIC	ENSG00000075292.19	novel	6821	28	NA	NA	-15	-2	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	124.168524535033	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATACCATCTGTGTTT	NA	False	NA	NA	False	AATAAA	-17	NA	71331744	71435050	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_71331866_71355718_71355781_71363152_71363192_71363953_71364253_71365428_71365707_71368381_71368529_71369882_71370006_71380221_71380281_71380512_71380566_71396140_71396192_71398700_71398773_71399558_71399646_71400111_71400181_71400477_71400519_71401955_71402088_71403869_71403999_71405600_71405643_71406127_71406263_71408121_71408248_71418601_71418640_71422813_71424039_71424649_71424716_71426459_71427415_71428546_71428652_71431326_71431429_71433164_71433284_71434741
H1_mix_00049736	chr2	+	6528	28	FSM	ENSG00000075292.19	ENST00000264447.9	6487	28	-50	9	4	0	multi-exon	FALSE	canonical	3	168	junction_1	109.270620878192	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATACCATCTGTGTTTGT	NA	False	NA	NA	False	AATAAA	-19	NA	71331731	71435052	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_71331876_71348752_71350272_71355718_71355781_71363152_71363192_71363953_71364253_71365428_71365707_71368381_71368529_71369882_71370006_71380221_71380281_71380512_71380566_71396140_71396192_71398700_71398773_71399558_71399646_71400111_71400181_71400477_71400519_71401955_71402088_71403869_71403999_71405600_71405643_71406127_71406263_71408121_71408248_71418601_71418640_71422813_71424039_71424649_71424716_71426459_71427415_71428546_71428652_71431326_71431429_71433164_71433284_71434741
H1_mix_00049737	chr2	+	6825	28	FSM	ENSG00000075292.19	ENST00000409544.5	6821	28	-4	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	127.905153903436	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTTTGTGGCTGATTT	-20	True	NA	NA	False	AATAAA	-28	NA	71331759	71435061	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_71331866_71348426_71350272_71355718_71355781_71363152_71363192_71363953_71364253_71365428_71365707_71368381_71368529_71369882_71370006_71380221_71380281_71380512_71380566_71396140_71396192_71398700_71398773_71399558_71399646_71400111_71400181_71400477_71400519_71401955_71402088_71403869_71403999_71405600_71405643_71406127_71406263_71408121_71408248_71418601_71418640_71422813_71424039_71424649_71424716_71426459_71427415_71428546_71428652_71431326_71431429_71433164_71433284_71434741
H1_mix_00049738	chr2	+	6503	28	NIC	ENSG00000075292.19	novel	6821	28	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	216	junction_1	104.786450814733	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATACCATCTGTGTTTGT	NA	False	NA	NA	False	AATAAA	-19	NA	71331746	71435052	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_71331866_71348752_71350272_71355718_71355781_71363152_71363192_71363953_71364253_71365428_71365707_71368381_71368529_71369882_71370006_71380221_71380281_71380512_71380566_71396140_71396192_71398700_71398773_71399558_71399646_71400111_71400181_71400477_71400519_71401955_71402088_71403869_71403999_71405600_71405643_71406127_71406263_71408121_71408248_71418601_71418640_71422813_71424039_71424649_71424716_71426459_71427415_71428546_71428652_71431326_71431429_71433164_71433284_71434741
H1_mix_00049740	chr2	+	5277	2	ISM	ENSG00000075292.19	ENST00000410075.5	3518	13	107164	1967	3581	-1967	internal_fragment	FALSE	canonical	3	59	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCTACACTCTATTGGGCT	3953	False	NA	NA	False	NA	NA	NA	71383756	71393703	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_71388724_71393393
H1_mix_00049741	chr2	+	5232	6	NIC	ENSG00000075292.19	novel	4470	9	NA	NA	-2138	0	combination_of_known_splicesites	FALSE	canonical	1	9	junction_4	232.988068364026	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATACCATCTGTGTTTGT	NA	False	NA	NA	False	AATAAA	-19	NA	71416083	71435052	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_71418640_71422813_71424039_71424649_71424716_71426459_71427415_71433164_71433284_71434741
H1_mix_00049744	chr2	+	6905	56	FSM	ENSG00000135636.15	ENST00000409582.7	6790	56	0	-115	0	0	multi-exon	FALSE	canonical	2	6	junction_5	8.27210786891959	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGTGTCAGTGTGTGTA	50	False	NA	15	True	TATAAA	-16	NA	71453721	71686763	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_71454087_71480882_71480939_71481878_71481971_71503213_71503320_71511806_71511922_71513239_71513333_71513715_71513922_71515622_71515752_71516179_71516243_71516988_71517040_71520177_71520209_71520788_71520905_71526219_71526347_71528297_71528402_71535020_71535090_71535267_71535312_71539156_71539240_71551040_71551157_71551606_71551721_71553010_71553189_71553806_71553932_71555964_71556072_71561751_71561945_71564057_71564214_71567950_71568083_71568171_71568339_71569819_71569935_71570228_71570335_71570598_71570742_71574197_71574372_71589592_71589687_71590210_71590289_71598563_71598746_71600701_71600843_71601498_71601529_71602775_71602806_71611244_71611347_71611464_71611627_71612640_71612807_71613333_71613411_71620546_71620610_71643964_71644064_71656161_71656291_71658877_71659034_71660559_71660652_71664267_71664439_71665161_71665305_71667375_71667516_71668753_71668843_71669111_71669208_71669604_71669747_71674196_71674297_71679056_71679236_71681000_71681111_71682529_71682678_71686453
H1_mix_00049747	chr2	+	3888	3	FSM	ENSG00000135638.14	ENST00000258106.11	2144	3	49	-1793	49	613	multi-exon	FALSE	canonical	3	16	junction_2	1	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAACATGGAATCAGGA	6	True	NA	-1	True	AATAAA	-15	NA	72917567	72936684	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_72918373_72924308_72924494_72933786
H1_mix_00049751	chr2	+	1235	7	FSM	ENSG00000135624.17	ENST00000398422.2	1234	7	-1	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	1329.56091331771	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATAACTTTGTAAATTATT	-2	True	NA	24	True	AATAAA	-13	NA	73234306	73253004	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73234385_73247761_73247927_73248990_73249180_73249818_73249917_73250305_73250439_73251225_73251433_73252639
H1_mix_00049752	chr2	+	1869	12	FSM	ENSG00000135624.17	ENST00000258091.10	1847	12	-22	0	17	0	multi-exon	FALSE	canonical	3	3200	junction_5	259.388569046645	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAACTTTGTAAATTATTT	-23	True	NA	25	True	AATAAA	-14	NA	73234285	73253005	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73234385_73239642_73239797_73240436_73240544_73243003_73243130_73243996_73244050_73244543_73244716_73247761_73247927_73248990_73249180_73249818_73249917_73250305_73250439_73251225_73251433_73252639
H1_mix_00049760	chr2	+	2030	13	FSM	ENSG00000124356.17	ENST00000682379.1	2040	13	0	10	0	-3	multi-exon	FALSE	canonical	3	5	junction_11	144.761777490546	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAAAGAATATTCCTTTT	13	True	NA	NA	False	ATTAAA	-15	NA	73828986	73873649	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73829071_73829404_73829511_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202_73862305_73870142_73870353_73873351
H1_mix_00049761	chr2	+	6381	11	FSM	ENSG00000124356.17	ENST00000394073.6	6370	11	-11	0	0	0	multi-exon	FALSE	canonical	3	187	junction_1	71.5782089745196	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	2	True	NA	3	True	AATAAA	-16	NA	73828975	73867152	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73829071_73829404_73829511_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
H1_mix_00049762	chr2	+	8197	9	FSM	ENSG00000124356.17	ENST00000684774.1	8197	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	125.541763469373	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	2	True	NA	3	True	AATAAA	-16	NA	73828975	73867152	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73831060_73844812_73845037_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
H1_mix_00049763	chr2	+	8049	9	FSM	ENSG00000124356.17	ENST00000683818.1	8034	9	-15	0	0	0	multi-exon	FALSE	canonical	3	352	junction_1	28.7290684673207	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	2	True	NA	3	True	AATAAA	-16	NA	73828975	73867152	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
H1_mix_00049765	chr2	+	8272	9	FSM	ENSG00000124356.17	ENST00000682747.1	8272	9	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_1	47.1273208977553	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	0	True	NA	3	True	AATAAA	-16	NA	73829027	73867152	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73829511_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
H1_mix_00049769	chr2	+	1036	6	FSM	ENSG00000114956.20	ENST00000629438.2	1029	6	-7	0	-7	0	multi-exon	FALSE	canonical	3	627	junction_3	639.592807964567	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCAGTTGCTCATTTATT	7217	False	NA	30	True	AATAAA	-28	NA	73926818	73958959	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73927053_73946718_73946907_73950584_73950733_73957124_73957241_73958145_73958246_73958709
H1_mix_00049770	chr2	+	887	5	FSM	ENSG00000114956.20	ENST00000348222.3	880	5	-7	0	-7	0	multi-exon	FALSE	canonical	3	379	junction_1	744.793385778902	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTTGCTCATTTATTTC	7217	False	NA	32	True	AATAAA	-30	NA	73926818	73958961	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73927053_73938909_73939023_73946718_73946907_73958145_73958246_73958709
H1_mix_00049771	chr2	+	703	4	FSM	ENSG00000114956.20	ENST00000418996.5	703	4	0	0	0	0	multi-exon	FALSE	canonical	3	973	junction_2	508.732411653383	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTTTTTCTAATTCAG	-6	True	NA	17	True	AATAAA	-15	NA	73926874	73958946	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73927053_73946718_73946907_73958145_73958246_73958709
H1_mix_00049772	chr2	+	1080	7	FSM	ENSG00000114956.20	ENST00000264093.9	1075	7	-5	0	0	0	multi-exon	FALSE	canonical	3	379	junction_1	628.723773475549	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTTTTTCTAATTCAG	-6	True	NA	17	True	AATAAA	-15	NA	73926874	73958946	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73927053_73938909_73939023_73946718_73946907_73950584_73950733_73957124_73957241_73958145_73958246_73958709
H1_mix_00049777	chr2	+	1623	3	FSM	ENSG00000225439.4	ENST00000533563.2	1644	3	21	0	-13	0	multi-exon	FALSE	canonical	3	15	junction_1	28.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTGTCTCAAAAAAAAAA	31	True	NA	14	True	AATACA	-36	NA	74148065	74150033	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_74148224_74148349_74148479_74148697
H1_mix_00049779	chr2	+	3533	3	FSM	ENSG00000225439.4	ENST00000656407.1	3520	3	-13	0	-13	0	multi-exon	FALSE	canonical	1	2	junction_2	6.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCAGCACTTTGGGGCCG	31	True	NA	NA	False	NA	NA	NA	74148065	74151952	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_74148224_74148349_74148479_74148706
H1_mix_00049782	chr2	+	2324	10	FSM	ENSG00000065911.13	ENST00000678228.1	2320	10	-4	0	0	0	multi-exon	FALSE	canonical	2	26	junction_3	632.577228974679	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGTATGAATTTCTGAAAT	-1	True	NA	24	True	AATAAA	-16	NA	74198612	74215279	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_74198743_74201381_74201480_74205704_74205890_74205981_74206089_74207703_74207827_74208568_74208722_74209941_74210050_74211198_74211292_74211740_74211867_74214078
H1_mix_00049783	chr2	+	6507	8	FSM	ENSG00000065911.13	ENST00000678955.1	6506	8	-1	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	418.179192135015	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTTAATCAATGTAGCTA	-1	True	NA	89	True	NA	NA	NA	74198612	74215344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_74198743_74201381_74205890_74207703_74207827_74208568_74208722_74209941_74210050_74211198_74211292_74211740_74211867_74214078
H1_mix_00049784	chr2	+	4696	9	FSM	ENSG00000065911.13	ENST00000489041.2	2463	9	-67	-2166	-64	126	multi-exon	FALSE	canonical	3	127	junction_2	519.757154832908	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCCACTCAGATGCATTG	NA	False	NA	34	True	NA	NA	NA	74198545	74217691	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_74198743_74201381_74201480_74205704_74205890_74207703_74207827_74208568_74208722_74209941_74210050_74211198_74211292_74211740_74211867_74214078
H1_mix_00049787	chr2	+	1144	6	FSM	ENSG00000005448.17	ENST00000482880.5	1026	6	-20	-98	0	98	multi-exon	FALSE	canonical	3	523	junction_4	24.3753974326574	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCCGTGCCCCTCTGTGC	-1	True	NA	NA	False	AAAACA	-23	NA	74421743	74425074	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_74422376_74422869_74422933_74423318_74423386_74423477_74423532_74423854_74423983_74424874
H1_mix_00049789	chr2	+	864	8	FSM	ENSG00000005448.17	ENST00000469321.5	864	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	192.208008072887	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCAGCCTTCCTTTGTCCC	-4	True	NA	-24	True	NA	NA	NA	74422174	74425704	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_74422376_74422869_74422933_74423318_74423386_74423477_74423532_74423854_74423983_74425096_74425238_74425416_74425492_74425569
H1_mix_00049800	chr2	+	2890	13	NIC	ENSG00000115282.21	novel	2916	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_8	24.5911004678974	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCCTACATAGTCATGCT	22	False	NA	10	True	AATAAA	-18	NA	74483100	74494559	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_74483136_74483321_74483411_74490024_74490128_74490243_74490474_74490655_74490740_74491127_74491185_74491294_74491376_74491480_74491667_74492003_74492056_74492138_74492230_74492303_74492446_74492645_74492748_74492921
H1_mix_00049803	chr2	+	1790	8	FSM	ENSG00000115317.12	ENST00000258080.8	1785	8	-5	0	-5	0	multi-exon	FALSE	canonical	3	143	junction_1	13.2526470209247	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGTGGGCAGTTAGTC	-42	True	NA	7	True	ATTAAA	-19	NA	74529927	74533319	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_74530513_74530616_74530822_74530910_74531106_74531338_74531372_74531596_74531703_74531855_74531926_74532618_74532715_74532819
H1_mix_00049807	chr2	+	5626	18	FSM	ENSG00000159399.10	ENST00000290573.7	5626	18	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_3	26.0327183011173	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATTCATGAGTGTTTTT	1	True	NA	4	True	AATAAA	-27	NA	74834126	74893359	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_74834644_74854292_74854456_74867635_74867785_74872299_74872420_74873275_74873372_74873843_74873944_74874265_74874450_74877165_74877322_74878687_74878922_74880264_74880570_74881710_74881860_74882119_74882240_74885493_74885590_74886293_74886394_74886489_74886674_74887902_74888059_74889244_74889479_74890796
H1_mix_00049809	chr2	+	358	2	Intergenic	novelGene_696	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	131	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAAGTCTCCTGCATTCA	4684	False	NA	NA	False	NA	NA	NA	75213821	75219535	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_75213878_75219233
H1_mix_00049810	chr2	+	749	6	FSM	ENSG00000115364.14	ENST00000358788.10	693	6	-56	0	-45	0	multi-exon	FALSE	canonical	1	3	junction_4	332.436219446678	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAAGTAAAATGCT	4833	False	NA	NA	False	AATAAA	-30	NA	75646737	75690759	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_75646911_75647101_75647220_75652141_75652261_75652522_75652658_75679774_75679853_75690633
H1_mix_00049812	chr2	+	1099	7	FSM	ENSG00000115364.14	ENST00000409374.5	1076	7	-23	0	-3	0	multi-exon	FALSE	canonical	3	5	junction_6	254.554130894699	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAACCATAATAAATTCT	-12	True	NA	NA	False	CATAAA	-40	NA	75646779	75670753	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_75646911_75647101_75647220_75652141_75652261_75652522_75652658_75654735_75654918_75655063_75655303_75670578
H1_mix_00049818	chr2	+	8559	2	Antisense	novelGene_ENSG00000176204.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	59	junction_1	0	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGTATTTTTTGTGAGT	NA	False	NA	13	True	AATAAA	-25	NA	77088569	77099887	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_+_77090901_77093659
H1_mix_00049819	chr2	+	11318	1	Intergenic	novelGene_699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGTATTTTTTGTGAGT	NA	False	NA	13	True	AATAAA	-25	NA	77088569	77099887	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_77088600_77099900
H1_mix_00049821	chr2	+	846	3	Antisense	novelGene_ENSG00000176204.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_2	56	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCTAATGCCCAATTAC	NA	False	NA	4	True	AATAAA	-10	NA	77088593	77150793	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_+_77088823_77090732_77090920_77150363
H1_mix_00049829	chr2	+	7500	7	FSM	ENSG00000176407.18	ENST00000409785.9	7500	7	0	0	0	0	multi-exon	FALSE	non_canonical	3	663	junction_5	46.3752807718365	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGTTTCCATTGCATTC	15	True	NA	6	True	AATAAA	-15	NA	84971160	85059472	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_84971468_85027888_85028057_85035015_85035156_85043563_85043666_85046103_85046279_85049365_85049649_85053147
H1_mix_00049832	chr2	+	2343	13	FSM	ENSG00000115459.18	ENST00000393852.8	2332	13	-11	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	13.1050774723218	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCGTCTCAGGTGTTTT	-17	True	NA	10	True	AATAAA	-14	NA	85354745	85391748	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_85354830_85355075_85355171_85356966_85357253_85362185_85362261_85363096_85363167_85368685_85368755_85369738_85369831_85371085_85371210_85371439_85371563_85377343_85377475_85389750_85389828_85390137_85390266_85390759
H1_mix_00049836	chr2	+	3443	8	ISM	ENSG00000168906.13	ENST00000306434.8	2817	9	8	1	8	-1	intron_retention	FALSE	canonical	3	345	junction_2	21.4323806138168	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTGTTACTCATTTG	9	True	NA	NA	False	AATAAA	-20	NA	85539175	85545280	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_85539379_85541082_85541161_85541254_85541378_85541632_85541746_85541828_85541973_85542154_85542374_85542564_85542748_85542900
H1_mix_00049837	chr2	+	3784	6	ISM	ENSG00000168906.13	ENST00000306434.8	2817	9	11	1	11	-1	intron_retention	FALSE	canonical	3	345	junction_2	9.13016976841066	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTGTTACTCATTTG	12	False	NA	NA	False	AATAAA	-20	NA	85539178	85545280	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_85539379_85541082_85541161_85541254_85541378_85541632_85541746_85541828_85541973_85542154
H1_mix_00049838	chr2	+	679	3	FSM	ENSG00000118640.11	ENST00000263864.10	679	3	0	0	0	0	multi-exon	FALSE	canonical	3	664	junction_1	24	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGAGGCACTTTCTC	3	True	NA	26	True	AATAAA	-19	NA	85577585	85582031	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_85577650_85579008_85579168_85581575
H1_mix_00049841	chr2	+	705	5	FSM	ENSG00000168894.10	ENST00000306368.9	685	5	-20	0	0	0	multi-exon	FALSE	canonical	3	1622	junction_2	132.822014365089	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGGACTCATGGCAGTG	1	True	NA	NA	False	NA	NA	NA	85595724	85597708	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_85595850_85596518_85596650_85596821_85596932_85597103_85597179_85597444
H1_mix_00049842	chr2	+	546	5	FSM	ENSG00000168894.10	ENST00000443647.5	535	5	-11	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	784.85189685698	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCCAGGGGCTCTGCAT	-4	True	NA	68	True	ATTAAA	-39	NA	85595744	85597604	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_85595850_85596518_85596650_85596856_85596932_85597103_85597179_85597444
H1_mix_00049843	chr2	+	559	4	FSM	ENSG00000168894.10	ENST00000456023.1	559	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	892.746449011264	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTCTGCATCCTCCATCA	68	False	NA	77	True	NA	NA	NA	85595816	85597613	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_85595850_85596518_85596650_85596952_85597179_85597444
H1_mix_00049845	chr2	+	2056	14	FSM	ENSG00000168883.20	ENST00000409470.5	2034	14	-24	2	2	1	multi-exon	FALSE	canonical	3	131	junction_13	193.270574048145	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGCCTCTTGTTTTATA	-19	True	NA	69	True	ATTAAA	-17	NA	85616144	85649278	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_85616464_85619219_85619290_85621484_85621580_85623645_85623783_85625538_85625692_85630720_85630947_85636052_85636131_85637368_85637437_85639202_85639392_85640975_85641119_85644947_85645084_85647929_85648017_85648760_85648854_85649016
H1_mix_00049846	chr2	+	2197	13	FSM	ENSG00000168883.20	ENST00000323701.11	2183	13	-17	3	0	0	multi-exon	FALSE	canonical	3	731	junction_7	63.8880857437441	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTCTTGTTTTATATC	5	True	NA	71	True	ATTAAA	-19	NA	85616168	85649280	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_85616464_85619219_85619290_85621484_85621580_85623645_85623783_85625538_85625692_85630720_85630947_85636052_85636131_85637368_85637437_85639202_85639392_85640975_85641119_85644947_85645084_85647929_85648017_85648760
H1_mix_00049850	chr2	+	754	4	FSM	ENSG00000132300.19	ENST00000476215.5	754	4	0	0	0	0	multi-exon	FALSE	canonical	1	179	junction_2	167.73457869172	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGGCAGCATGTTAACAG	NA	False	NA	NA	False	NA	NA	NA	86127871	86132832	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_86127992_86130647_86130738_86131077_86131107_86132317
H1_mix_00049855	chr2	+	827	3	FSM	ENSG00000132313.15	ENST00000605125.5	833	3	6	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	138	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCCCATCTCCCACTCAG	-8	True	NA	NA	False	NA	NA	NA	86199462	86211045	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_86199534_86206105_86206296_86210479
H1_mix_00049856	chr2	+	1061	5	FSM	ENSG00000132313.15	ENST00000254644.12	1061	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	116.983706130384	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAAATGATGTTCGATTAT	4194	False	NA	22	True	AATAAA	-22	NA	86199354	86212838	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_86199534_86206105_86206296_86207182_86207328_86210479_86210614_86212425
H1_mix_00049857	chr2	+	921	5	FSM	ENSG00000132313.15	ENST00000409180.1	651	5	-218	-52	-110	0	multi-exon	FALSE	canonical	3	47	junction_4	103.588126732749	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGTAGTTGTGTGATGA	4084	False	NA	19	True	AATAAA	-15	NA	86199244	86213790	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_86199534_86206105_86206296_86207182_86207328_86210479_86210614_86213627
H1_mix_00049858	chr2	+	3742	4	FSM	ENSG00000132313.15	ENST00000337109.9	3723	4	-19	0	-19	0	multi-exon	FALSE	canonical	3	276	junction_3	8.17856276425687	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGTAGTTGTGTGATGA	4277	False	NA	19	True	AATAAA	-15	NA	86199437	86213790	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_86199534_86206105_86206296_86207182_86207328_86210479
H1_mix_00049859	chr2	+	4691	26	FSM	ENSG00000115548.17	ENST00000312912.10	4667	26	-24	0	-24	0	multi-exon	TRUE	canonical	3	84	junction_5	14.0089114495024	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCTCAGTTTATTGGC	-27	True	NA	15	True	ATTAAA	-15	NA	86441346	86492716	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_86441445_86442017_86442234_86449806_86449963_86451102_86451214_86455084_86455188_86456441_86456567_86456804_86456878_86456982_86457072_86464052_86464217_86466371_86466884_86470203_86470409_86474775_86474991_86477876_86478030_86478169_86478266_86478607_86478736_86480166_86480363_86481929_86482103_86482457_86482695_86483986_86484159_86484941_86485030_86485728_86485860_86489317_86489438_86489519_86489660_86490880_86491058_86491140_86491276_86492038
H1_mix_00049860	chr2	+	1223	3	NNC	ENSG00000115548.17	novel	8741	22	NA	NA	12	-5945	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	55	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTTTATGTGATTTGA	17	True	NA	15	True	AATAAA	-16	NA	86441390	86443942	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_86441445_86442017_86442234_86442989
H1_mix_00049866	chr2	+	338	5	ISM	ENSG00000204745.4	ENST00000454465.2	3795	31	36728	25463	36728	-25463	internal_fragment	FALSE	canonical	3	144	junction_4	64.9865370673034	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGCCTGTTTGTCTCTGG	NA	False	NA	NA	False	NA	NA	NA	87161925	87171166	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_87162009_87162949_87163029_87164583_87164659_87170570_87170648_87171142
H1_mix_00049873	chr2	+	2120	3	NNC	ENSG00000287670.1	novel	939	2	NA	NA	36	1372	at_least_one_novel_splicesite	FALSE	non_canonical	2	7	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTGAAGTTTTTCTTT	NA	False	NA	6	True	ATTAAA	-16	NA	88017052	88022823	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_88017292_88020695_88021450_88021696
H1_mix_00049875	chr2	+	3649	8	FSM	ENSG00000144115.18	ENST00000674169.1	3649	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	8.12403840463596	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGAGCGGCACGTCTCTGG	1101	False	NA	22	True	AATAAA	-17	NA	88171459	88186626	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_88173374_88174638_88174834_88175248_88175402_88178782_88179014_88182698_88182848_88182947_88183074_88185327_88185480_88185897
H1_mix_00049877	chr2	+	3651	1	FSM	ENSG00000234028.4	ENST00000606164.1	3651	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACTTTTGTGTCTTACTT	281	False	NA	8	True	AATAAA	-16	NA	88628170	88631821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_88628200_88631800
H1_mix_00049887	chr2	+	1412	8	NIC	ENSG00000115042.10	novel	4775	8	NA	NA	0	37	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	114.432584199303	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTTCTGCTGTTTGTCT	-22	True	NA	14	True	AATAAA	-23	NA	95402707	95413133	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_95402993_95405552_95405804_95406940_95407158_95410526_95410587_95410863_95411027_95412433_95412543_95412676_95412765_95412894
H1_mix_00049888	chr2	+	1530	9	NIC	ENSG00000115042.10	novel	1366	9	NA	NA	0	44	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	125.180619506376	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTTTGTCTTCTTTTG	-7	True	NA	21	True	AATAAA	-30	NA	95402722	95413140	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_95402993_95405276_95405403_95405552_95405804_95406940_95407158_95410526_95410587_95410863_95411027_95412433_95412543_95412676_95412765_95412894
H1_mix_00049893	chr2	+	762	5	FSM	ENSG00000231584.9	ENST00000692100.1	801	5	32	7	0	-7	multi-exon	FALSE	canonical	2	4	junction_2	40.1831743395168	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGCAGCTTGGCTTCTGC	30	False	NA	-2	True	AATAAA	-14	NA	96010624	96021827	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_96010733_96015108_96015326_96021124_96021234_96021367_96021466_96021597
H1_mix_00049896	chr2	+	3988	7	FSM	ENSG00000144021.3	ENST00000488633.2	3968	7	-20	0	-20	0	multi-exon	FALSE	canonical	3	593	junction_5	62.9700104988257	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAACCTGAGTTTCTTAG	102	False	NA	60	True	AATAAA	-30	NA	96266204	96274173	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_96266490_96267320_96267470_96267624_96267737_96267835_96267925_96268456_96268659_96269267_96269356_96271110
H1_mix_00049898	chr2	+	4133	2	FSM	ENSG00000198885.10	ENST00000536814.1	1947	2	0	-2186	0	22	multi-exon	FALSE	canonical	3	94	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCAGCATTCTCACATGC	6	True	NA	38	True	NA	NA	NA	96325330	96330539	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_96325566_96326641
H1_mix_00049901	chr2	+	5997	18	NIC	ENSG00000121152.10	novel	6030	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	87	junction_1	40.4136911947691	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATGTTGCCTTTTTTTTT	-17	True	NA	5	True	AATAAA	-17	NA	96335765	96377091	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_96335849_96341674_96341895_96342049_96342141_96342755_96342849_96343165_96343305_96344104_96344230_96351830_96352021_96353305_96353398_96354182_96354389_96359044_96359194_96360142_96360250_96360587_96360711_96364480_96364592_96365875_96366059_96367256_96367374_96368971_96369064_96369424_96369501_96373291
H1_mix_00049903	chr2	+	2056	6	FSM	ENSG00000196843.17	ENST00000412735.5	2038	6	-18	0	-9	0	multi-exon	FALSE	canonical	2	4	junction_2	10.6395488626163	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACGTAGCCCTGAGGTGT	14	False	NA	15	True	AATAAA	-17	NA	96536733	96552630	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_96536831_96547401_96547518_96549752_96549806_96550187_96550286_96550573_96550734_96551098
H1_mix_00049906	chr2	+	4923	8	FSM	ENSG00000168763.16	ENST00000305510.4	4900	8	-23	0	0	0	multi-exon	FALSE	canonical	3	231	junction_5	20.1190335305671	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTTTCTGTGTCAGGATT	-13	True	NA	22	True	AATAAA	-22	NA	96816244	96835382	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_96817503_96825057_96825202_96826832_96826983_96827730_96827901_96828098_96828196_96828566_96828701_96828995_96829135_96832551
H1_mix_00049921	chr2	+	6958	25	NIC	ENSG00000040933.16	novel	9996	26	NA	NA	-59	275	combination_of_known_junctions	FALSE	canonical	3	159	junction_16	31.8049611783375	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAACAGTTTCTACCTTC	NA	False	NA	-11	True	NA	NA	NA	98444794	98591308	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_98445086_98518963_98519026_98519945_98520155_98520686_98520732_98533376_98533496_98535728_98535846_98536128_98536209_98537862_98537975_98538890_98538982_98539527_98539676_98543876_98544008_98545968_98546074_98546585_98546695_98552785_98552970_98554270_98554490_98555552_98555692_98559462_98559496_98563464_98563638_98564639_98564764_98565639_98565767_98566028_98566170_98568570_98568669_98572814_98572928_98576988_98577144_98587475
H1_mix_00049922	chr2	+	7177	26	NNC	ENSG00000040933.16	novel	6752	26	NA	NA	-16	402	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_13	70.0524831822542	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTCCTGTGTTGTGCTT	-37	True	NA	NA	False	NA	NA	NA	98444837	98591435	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_98445086_98518963_98519026_98519945_98520155_98520686_98520732_98533376_98533496_98535728_98535846_98536128_98536209_98537862_98537975_98538890_98538982_98539527_98539676_98543876_98544008_98545968_98546074_98546585_98546695_98548951_98548970_98552785_98552970_98554270_98554490_98555552_98555809_98559462_98559496_98563464_98563638_98564639_98564764_98565639_98565767_98566028_98566170_98568570_98568669_98572814_98572928_98576988_98577144_98587475
H1_mix_00049923	chr2	+	10100	25	FSM	ENSG00000040933.16	ENST00000409851.8	10096	25	-4	0	0	0	multi-exon	FALSE	canonical	3	68	junction_16	45.3884277652355	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATTACTGAGAATGATGAT	-21	True	NA	NA	False	ATTAAA	-14	NA	98444853	98594392	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_98445086_98518963_98519026_98519945_98520155_98520686_98520732_98533376_98533496_98535728_98535846_98536128_98536209_98537862_98537975_98538890_98538982_98539527_98539676_98543876_98544008_98545968_98546074_98546585_98546695_98552785_98552970_98554270_98554490_98555552_98555809_98559462_98559496_98563464_98563638_98564639_98564764_98565639_98565767_98566028_98566170_98568570_98568669_98572814_98572928_98576988_98577144_98587475
H1_mix_00049929	chr2	+	695	1	FSM	ENSG00000231822.1	ENST00000424783.1	735	1	22	18	22	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATACCACACATGGTTAATT	NA	False	NA	NA	False	NA	NA	NA	99102039	99102734	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_99102000_99102700
H1_mix_00049934	chr2	+	1754	4	FSM	ENSG00000144182.17	ENST00000415142.1	803	4	-89	-862	0	0	multi-exon	FALSE	canonical	1	2	junction_1	13.8884444373331	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATTGTATGTCAAAAAAAAA	-13	True	NA	21	True	AATAAA	-17	NA	99154984	99163137	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_99155369_99155481_99155545_99156300_99156427_99161956
H1_mix_00049935	chr2	+	1761	2	FSM	ENSG00000144182.17	ENST00000436234.1	583	2	4	-1182	4	100	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTGTATTTCTTCTGA	8	True	NA	141	True	NA	NA	NA	99155084	99163257	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_99155545_99161956
H1_mix_00049936	chr2	+	4435	6	FSM	ENSG00000185414.20	ENST00000338148.8	4435	6	0	0	0	0	multi-exon	FALSE	canonical	3	396	junction_1	35.9699874895725	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTAGTTTTCCGTATTACC	-15	True	NA	24	True	AATAAA	-20	NA	99181183	99199561	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_99181250_99186176_99186255_99188176_99188258_99194750_99194898_99195115_99195190_99195572
H1_mix_00049943	chr2	+	726	4	FSM	ENSG00000071082.11	ENST00000409320.7	716	4	-10	0	0	0	multi-exon	FALSE	canonical	3	9956	junction_1	1790.00856608751	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCATGTTTTTGTTCTTTT	-1	True	NA	26	True	AATAAA	-14	NA	101002282	101006418	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_101002316_101002701_101002809_101004157_101004284_101005958
H1_mix_00049944	chr2	+	839	4	FSM	ENSG00000071082.11	ENST00000409733.5	825	4	-10	-4	0	0	multi-exon	FALSE	canonical	3	7790	junction_3	2806.58416347464	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTTCTTTTTAGTT	-1	True	NA	31	True	AATAAA	-19	NA	101002282	101006423	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_101002809_101004157_101004284_101005958_101006072_101006349
H1_mix_00049945	chr2	+	1297	5	FSM	ENSG00000071082.11	ENST00000264258.8	1291	5	-6	0	0	0	multi-exon	FALSE	canonical	3	7790	junction_4	2551.43057910655	3913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAAAGCATGGTTTGTA	-1	True	NA	13	True	ATTAAA	-16	NA	101002282	101007267	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_101002316_101002701_101002809_101004157_101004284_101005958_101006072_101006349
H1_mix_00049946	chr2	+	780	5	FSM	ENSG00000071082.11	ENST00000409650.5	770	5	-10	0	0	0	multi-exon	TRUE	canonical	1	5	junction_4	5615.70478101369	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTAATATAATGTCATGT	-1	True	NA	73	True	NA	NA	NA	101002282	101018289	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_101002316_101002701_101002809_101004157_101004284_101005958_101006072_101017888
H1_mix_00049947	chr2	+	1110	5	FSM	ENSG00000071082.11	ENST00000409028.8	1110	5	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_4	5577.42634980508	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAGAAATAAACTTATTT	-1	True	NA	NA	False	AATAAA	-20	NA	101002282	101019728	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_101002316_101002701_101002809_101004157_101004284_101005958_101006072_101018997
H1_mix_00049948	chr2	+	717	4	FSM	ENSG00000071082.11	ENST00000441435.1	717	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	6472.95781609064	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAGGTACACCATGAATT	185	False	NA	35	True	AATAAA	-28	NA	101002738	101024032	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_101002809_101004157_101004284_101005958_101006072_101023624
H1_mix_00049952	chr2	+	7369	29	NIC	ENSG00000071054.17	novel	3792	30	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	3	86	junction_18	66.0106187345209	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTATTTTATGTGGCATGA	-5	True	NA	6	True	AATAAA	-12	NA	101697705	101894685	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_101698138_101698472_101698539_101790719_101790777_101823927_101824054_101825318_101825430_101829503_101829595_101831720_101831852_101834408_101834464_101835899_101835979_101839818_101839995_101842608_101842682_101844100_101844312_101855976_101856139_101858995_101859083_101859642_101859865_101864929_101865037_101866430_101866580_101867211_101867310_101869621_101869798_101870294_101870416_101873646_101873765_101874081_101874253_101877002_101877147_101882550_101882686_101885186_101885288_101887087_101887238_101887777_101887938_101888795_101888936_101891165
H1_mix_00049953	chr2	+	4223	31	FSM	ENSG00000071054.17	ENST00000625522.3	7135	31	-282	3194	0	0	multi-exon	FALSE	canonical	0	0	junction_19	84.8832138882594	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCAGGTGCTATAAGTGT	33	False	NA	30	True	AATAAA	-38	NA	101697743	101891496	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_101698138_101698472_101698539_101790719_101790777_101823927_101824054_101825318_101825430_101829503_101829595_101831720_101831852_101834408_101834464_101835899_101835979_101839818_101839995_101842608_101842682_101844100_101844312_101855976_101856139_101858995_101859083_101859735_101859865_101860824_101860987_101864929_101865037_101866427_101866580_101867211_101867310_101868028_101868038_101869621_101869798_101870294_101870416_101873646_101873765_101874081_101874253_101877002_101877147_101882550_101882686_101885186_101885288_101887087_101887238_101887777_101887938_101888795_101888936_101891165
H1_mix_00049954	chr2	+	3800	30	FSM	ENSG00000071054.17	ENST00000634702.1	3800	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	85.068944550827	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCAGGTGCTATAAGTGT	315	False	NA	30	True	AATAAA	-38	NA	101698025	101891496	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_101698138_101698472_101698539_101790719_101790777_101823927_101824054_101825318_101825430_101829503_101829595_101831720_101831852_101834408_101834464_101835899_101835979_101839818_101839995_101842608_101842682_101844100_101844312_101855976_101856139_101858995_101859083_101859735_101859865_101864929_101865037_101866430_101866580_101867211_101867310_101868028_101868038_101869621_101869798_101870294_101870416_101873646_101873765_101874081_101874253_101877002_101877147_101882550_101882686_101885186_101885288_101887087_101887262_101887777_101887938_101888795_101888936_101891165
H1_mix_00049955	chr2	+	6958	29	FSM	ENSG00000071054.17	ENST00000413150.6	6958	29	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_18	66.064555627084	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTTATGTGGCATGAGT	315	False	NA	8	True	AATAAA	-14	NA	101698025	101894687	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_101698138_101698472_101698539_101790719_101790777_101823927_101824054_101825318_101825430_101829503_101829595_101831720_101831852_101834408_101834464_101835899_101835979_101839818_101839995_101842608_101842682_101844100_101844312_101855976_101856139_101858995_101859083_101859735_101859865_101864929_101865037_101866430_101866580_101867211_101867310_101869621_101869798_101870294_101870416_101873646_101873765_101874081_101874253_101877002_101877147_101882550_101882686_101885186_101885288_101887087_101887238_101887777_101887938_101888795_101888936_101891165
H1_mix_00049956	chr2	+	4251	29	FSM	ENSG00000071054.17	ENST00000417294.5	4251	29	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_15	79.837102967255	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	267	False	NA	NA	False	NA	NA	NA	101698529	101891987	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_101698539_101790719_101790777_101823927_101824054_101825318_101825430_101829503_101829595_101831720_101831852_101834408_101834464_101835899_101835979_101839818_101839995_101842608_101842682_101844100_101844312_101855976_101856139_101858995_101859083_101859735_101859865_101860824_101860987_101864929_101865037_101866430_101866580_101867211_101867310_101869621_101869798_101870294_101870416_101873646_101873765_101874081_101874253_101877002_101877147_101882550_101882686_101885186_101885288_101887087_101887238_101887777_101887938_101888795_101888936_101891165
H1_mix_00049957	chr2	+	3416	22	FSM	ENSG00000071054.17	ENST00000421882.5	3416	22	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	103.87016577376	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCAGGTGCTATAAGTGT	6	False	NA	30	True	AATAAA	-38	NA	101839827	101891496	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_101839995_101842608_101842682_101844100_101844312_101855976_101856139_101858995_101859083_101859642_101859865_101860824_101860987_101863820_101864052_101864929_101865037_101866430_101866580_101867211_101867310_101869621_101869798_101870294_101870416_101873646_101873765_101874081_101874253_101877002_101877147_101882550_101882686_101885186_101885288_101887087_101887238_101887777_101887938_101888795_101888936_101891165
H1_mix_00049958	chr2	+	2673	18	NIC	ENSG00000071054.17	novel	4232	30	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_8	99.783849439659	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCAGGTGCTATAAGTGT	4219	False	NA	30	True	AATAAA	-38	NA	101855977	101891496	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_101856139_101858995_101859083_101859735_101859865_101864929_101865037_101866427_101866580_101867211_101867310_101869621_101869798_101870294_101870416_101871493_101871686_101873646_101873765_101874081_101874253_101877002_101877147_101882550_101882686_101885186_101885288_101887087_101887238_101887777_101887938_101888795_101888936_101891165
H1_mix_00049959	chr2	+	5927	18	NIC	ENSG00000071054.17	novel	7970	33	NA	NA	29	-2	combination_of_known_junctions	FALSE	canonical	3	46	junction_8	99.7302590364331	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTATTTTATGTGGCATGA	4247	False	NA	6	True	AATAAA	-12	NA	101856005	101894685	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_101856139_101858995_101859083_101859642_101859865_101864929_101865037_101866427_101866580_101867211_101867310_101869621_101869798_101870294_101870416_101871493_101871686_101873646_101873765_101874081_101874253_101877002_101877147_101882550_101882686_101885186_101885288_101887087_101887238_101887777_101887938_101888795_101888936_101891165
H1_mix_00049967	chr2	+	840	5	FSM	ENSG00000135974.10	ENST00000410049.1	854	5	14	0	6	0	multi-exon	FALSE	canonical	2	30	junction_3	105.134140506307	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAATGGCTTAGTATAT	-5	True	NA	79	True	TTTAAA	-43	NA	105337545	105345596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_105337687_105339582_105339750_105342847_105342975_105343100_105343224_105345314
H1_mix_00049968	chr2	+	4933	4	FSM	ENSG00000135974.10	ENST00000258457.7	4587	4	16	-362	16	362	multi-exon	FALSE	canonical	3	248	junction_2	17.2497987105808	880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTGTGTATTTGTTGAG	5	True	NA	NA	False	AATAAA	-16	NA	105337555	105349573	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_105337687_105339582_105339750_105342847_105343224_105345314
H1_mix_00049969	chr2	+	919	6	NNC	ENSG00000135974.10	novel	854	5	NA	NA	43	362	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_5	121.728550471941	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTGTGTATTTGTTGAG	32	True	NA	NA	False	AATAAA	-16	NA	105337582	105349573	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_105337687_105339582_105339750_105342847_105342975_105343100_105343224_105345314_105345390_105349250
H1_mix_00049977	chr2	+	359	1	FSM	ENSG00000237745.1	ENST00000448535.1	339	1	37	-57	37	57	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCAAATTGGTGGTTTAT	NA	False	NA	NA	False	AATAAA	-7	NA	107914984	107915343	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_107915000_107915300
H1_mix_00049980	chr2	+	6873	23	NIC	ENSG00000135968.22	novel	6909	23	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	32.9265711987916	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATATTTTTATGGCTGCTC	23	True	NA	1	True	ATTAAA	-12	NA	108449230	108509395	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_108449290_108449632_108449690_108451027_108451113_108452398_108452467_108468979_108469085_108469650_108472117_108472826_108472900_108475534_108475636_108475751_108475851_108481696_108481817_108482286_108482452_108483061_108483167_108484148_108484312_108485635_108485737_108485830_108485909_108486510_108486649_108487698_108487821_108489837_108490015_108492572_108492791_108495290_108495486_108496969_108497110_108499552_108499755_108507559
H1_mix_00049982	chr2	+	4633	10	FSM	ENSG00000169756.16	ENST00000409441.5	1627	10	-70	-2936	-55	138	multi-exon	FALSE	canonical	3	18	junction_1	36.9397240092092	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAACAATGGTGTAGTCTT	12	False	NA	NA	False	AATAAA	-41	NA	108621195	108687384	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_108621462_108659604_108659765_108670780_108670848_108672324_108672446_108672879_108673030_108675877_108676029_108676605_108676699_108677978_108678028_108680694_108680771_108683884
H1_mix_00049986	chr2	+	2396	14	FSM	ENSG00000163006.12	ENST00000412964.6	2250	14	-146	0	-146	0	multi-exon	FALSE	canonical	3	38	junction_13	38.9607601106853	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGTTAAATAATACTGTC	NA	False	NA	NA	False	AATAAA	-20	NA	108786610	108876578	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_108786916_108788031_108788090_108788851_108788967_108791674_108791803_108794539_108794722_108798427_108798587_108804888_108805009_108812630_108812709_108812819_108812928_108815940_108816106_108839184_108839302_108846737_108846931_108856793_108856971_108876087
H1_mix_00049987	chr2	+	2389	15	FSM	ENSG00000163006.12	ENST00000295124.9	2375	15	-14	0	0	0	multi-exon	FALSE	canonical	3	132	junction_13	20.2338370870506	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGTTAAATAATACTGTC	-19	True	NA	NA	False	AATAAA	-20	NA	108786756	108876578	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_108786916_108788031_108788090_108788851_108788967_108791674_108791803_108794539_108794722_108798427_108798587_108804888_108805009_108812630_108812709_108812819_108812928_108815940_108816106_108839184_108839302_108846737_108846931_108856793_108856971_108873450_108873590_108876087
H1_mix_00049990	chr2	+	7337	23	NNC	ENSG00000015568.13	novel	2179	16	NA	NA	-32307	-9	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_1	62.2773720895492	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGCTCTTTTATGTTAC	NA	False	NA	NA	False	ATTAAA	-15	NA	109760450	109857686	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_109760772_109801782_109801851_109803431_109803544_109803978_109804132_109808173_109808405_109808749_109808896_109813459_109813656_109819695_109819784_109821904_109822115_109824221_109824404_109824486_109824663_109824829_109824954_109825875_109826035_109826300_109826439_109826700_109826848_109827791_109827972_109828064_109828149_109831316_109831453_109834996_109835092_109835818_109838043_109845102_109845243_109847809_109848012_109855861
H1_mix_00049991	chr2	+	7399	23	FSM	ENSG00000015568.13	ENST00000016946.8	7268	23	-141	10	-110	0	multi-exon	FALSE	canonical	3	130	junction_1	57.6089158905342	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTTACCCACTGTCT	NA	False	NA	NA	False	ATTAAA	-24	NA	109794163	109857695	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_109794538_109801782_109801851_109803431_109803544_109803978_109804132_109808173_109808405_109808749_109808896_109813459_109813656_109819695_109819784_109821904_109822115_109824221_109824404_109824486_109824663_109824829_109824954_109825875_109826035_109826300_109826439_109826700_109826848_109827791_109827972_109828064_109828149_109831316_109831453_109834996_109835092_109835818_109838043_109845102_109845243_109847809_109848012_109855861
H1_mix_00049995	chr2	+	8505	16	ISM	ENSG00000015568.13	ENST00000016946.8	7268	23	23005	10	-1868	0	3prime_fragment	FALSE	canonical	3	247	junction_9	36.8942030978069	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTTACCCACTGTCT	2490	False	NA	NA	False	ATTAAA	-24	NA	109817309	109857695	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_109819784_109821904_109822115_109824221_109824404_109824486_109824663_109824829_109824954_109825875_109826035_109826300_109826439_109826700_109826848_109827791_109827972_109828064_109828149_109831316_109831453_109834996_109835092_109835818_109838043_109845102_109845243_109847809_109848012_109855861
H1_mix_00050001	chr2	+	1690	12	NNC	ENSG00000153093.20	novel	2699	18	NA	NA	16	40583	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	48.7989635440673	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCCATCTCATTGACTT	NA	False	NA	NA	False	AATAAA	-16	NA	110732554	110928600	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_110732775_110768367_110768465_110784731_110784816_110793649_110793737_110794075_110794175_110798609_110798725_110799013_110799101_110801651_110801725_110805262_110805396_110841370_110841406_110908788_110908906_110928057
H1_mix_00050003	chr2	+	2699	18	FSM	ENSG00000153093.20	ENST00000439055.6	2699	18	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_12	43.3196855449037	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTTCCCGCTGCTTGCAG	0	True	NA	15	True	AATAAA	-20	NA	110732572	111118548	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_110732775_110768367_110768465_110784731_110784816_110793649_110793737_110794075_110794175_110798609_110798725_110799013_110799101_110801651_110801725_110805262_110805396_110841370_110841406_110908788_110908906_110933488_110933643_110987107_110987218_110995892_110996005_111031626_111031715_111049217_111049289_111092864_111092967_111117615
H1_mix_00050007	chr2	+	744	4	FSM	ENSG00000153094.24	ENST00000337565.9	720	4	-24	0	-24	0	multi-exon	FALSE	canonical	3	10	junction_3	9.42809041582063	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCTCTGTTTCTTTCTA	6	False	NA	7	True	AATAAA	-17	NA	111120889	111128844	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_111121189_111123732_111123870_111124049_111124140_111128626
H1_mix_00050010	chr2	+	4889	4	NIC	ENSG00000153094.24	novel	1197	6	NA	NA	-82	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	11.2249721603218	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGAGCGTTTGATTTG	1577	False	NA	13	True	AATAAA	-14	NA	111122587	111168444	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_111122924_111123732_111123870_111150043_111150148_111164132
H1_mix_00050012	chr2	+	1221	6	FSM	ENSG00000153094.24	ENST00000433098.5	1197	6	-24	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	11.2534439173082	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGATTATGTAACCCCTG	-19	True	NA	15	True	ATTAAA	-27	NA	111122669	111164643	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_111122924_111123732_111123870_111124049_111124140_111150043_111150148_111153779_111153905_111164132
H1_mix_00050024	chr2	+	766	3	FSM	ENSG00000125611.16	ENST00000454841.5	748	3	-18	0	-18	0	multi-exon	FALSE	canonical	3	619	junction_1	52	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGATTCCTGCCATCCGT	-13	True	NA	17	True	AATAAA	-21	NA	112584450	112589040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_112584650_112585973_112586366_112588865
H1_mix_00050025	chr2	+	691	4	FSM	ENSG00000125611.16	ENST00000324913.10	523	4	-168	0	-28	0	multi-exon	FALSE	canonical	3	619	junction_1	55.2509426767242	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGATTCCTGCCATCCGT	-23	True	NA	17	True	AATAAA	-21	NA	112584440	112589040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_112584650_112585973_112586115_112586199_112586366_112588865
H1_mix_00050028	chr2	+	3100	6	ISM	ENSG00000144136.11	ENST00000272542.8	3297	11	10265	0	-2159	0	3prime_fragment	FALSE	canonical	3	717	junction_1	160.784327594452	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTCTCATGGTTTTCTT	944	False	NA	54	True	AATAAA	-23	NA	112656203	112663825	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_112657242_112658824_112659095_112659203_112659763_112660386_112660573_112661141_112661227_112662863
H1_mix_00050033	chr2	+	1686	14	FSM	ENSG00000136682.16	ENST00000416503.6	1665	14	-21	0	-21	0	multi-exon	FALSE	canonical	3	76	junction_9	518.530684729378	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGATGTTGACGACCTG	NA	False	NA	NA	False	AATAAA	-19	NA	113437741	113496171	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_113438023_113441350_113441438_113443766_113443864_113444963_113445056_113453138_113453199_113454740_113454779_113460672_113460720_113462407_113462495_113465128_113465174_113482176_113482229_113493756_113493826_113493928_113493995_113495119_113495250_113495636
H1_mix_00050036	chr2	+	902	3	FSM	ENSG00000136682.16	ENST00000490323.5	880	3	-22	0	0	0	multi-exon	FALSE	canonical	3	1290	junction_1	162.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTATTCTAGTGAATTAAA	9	False	NA	NA	False	TATAAA	-26	NA	113437816	113444375	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_113438023_113441350_113441438_113443766
H1_mix_00050037	chr2	+	3305	6	FSM	ENSG00000136682.16	ENST00000479583.5	3305	6	0	0	0	0	multi-exon	FALSE	canonical	3	1072	junction_5	250.093262604173	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAAGTGTCACCATTTTA	NA	False	NA	NA	False	ATTAAA	-13	NA	113468584	113496119	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_113471090_113482176_113482229_113493756_113493826_113493928_113493995_113495119_113495250_113495636
H1_mix_00050038	chr2	+	1893	3	NNC	ENSG00000146556.15	novel	1684	10	NA	NA	-1399	-8683	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	0.5	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCCTTTGGTTGCCATTC	3052	False	NA	NA	False	NA	NA	NA	113587150	113590347	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_113587544_113588549_113588704_113589001
H1_mix_00050039	chr2	+	1684	10	FSM	ENSG00000146556.15	ENST00000453662.6	1684	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	95.0730713130111	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAACAGTGTGCTTTTA	4451	False	NA	NA	False	AATAAA	-12	NA	113588549	113599034	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_113588704_113595062_113595162_113595368_113595516_113595692_113595830_113596067_113596204_113596380_113596583_113596670_113596830_113597485_113597639_113598397_113598467_113598606
H1_mix_00050041	chr2	+	1980	7	FSM	ENSG00000144134.19	ENST00000409842.5	1979	7	-1	0	-1	0	multi-exon	FALSE	canonical	3	40	junction_1	57.849421393438	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAGTAAATGTATGTGC	0	True	NA	13	True	AGTAAA	-17	NA	113627238	113643392	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_113627401_113628549_113628714_113632914_113632945_113634152_113634233_113641352_113641451_113641780_113641865_113642030
H1_mix_00050043	chr2	+	2232	8	FSM	ENSG00000144134.19	ENST00000409121.6	2232	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	54.3229195813032	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAGTAAATGTATGTGC	1056	False	NA	13	True	AGTAAA	-17	NA	113628327	113643392	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_113628714_113632914_113632945_113634152_113634233_113635050_113635131_113640893_113641006_113641352_113641451_113641780_113641865_113642030
H1_mix_00050048	chr2	+	2186	2	Intergenic	novelGene_713	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	62	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTACAAAACAACCAAAAAAT	NA	False	NA	NA	False	ATTAAA	-23	NA	117278751	117285604	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_117279352_117284018
H1_mix_00050057	chr2	+	3952	6	FSM	ENSG00000115107.20	ENST00000393106.6	3915	6	-37	0	-37	0	multi-exon	FALSE	canonical	2	4	junction_1	52.0169203240638	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGGCTTTTATTTCTGC	1101	False	NA	14	True	AATAAA	-19	NA	119223793	119265652	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_119223889_119239362_119239431_119245488_119245989_119247678_119248207_119254683_119254849_119263056
H1_mix_00050060	chr2	+	1687	2	FSM	ENSG00000171227.7	ENST00000306406.5	1687	2	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTCTGCCCAGAAGTAG	-5	True	NA	18	True	ATTAAA	-18	NA	119431853	119438504	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_119431925_119436888
H1_mix_00050063	chr2	+	1765	2	FSM	ENSG00000144120.13	ENST00000424086.5	1738	2	-27	0	-27	0	multi-exon	FALSE	canonical	3	38	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCGTTTTTTTTTTTT	NA	False	NA	34	True	AATAAA	-16	NA	119679139	119682118	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_119679618_119680831
H1_mix_00050064	chr2	+	1373	2	FSM	ENSG00000144120.13	ENST00000272521.7	1363	2	-10	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCGTTTTTTTTTTTT	-10	True	NA	34	True	AATAAA	-16	NA	119679190	119682118	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_119679277_119680831
H1_mix_00050068	chr2	+	11090	27	FSM	ENSG00000088179.9	ENST00000263708.7	11090	27	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_13	29.9858201202506	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAGAAGTTTTGAAGATT	17	True	NA	9	True	AATAAA	-22	NA	119759921	119984899	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_119760385_119809836_119809992_119862535_119862644_119877322_119877366_119877463_119877543_119881785_119881831_119882096_119882150_119882502_119882624_119885794_119885883_119900717_119900807_119915178_119915243_119920068_119920242_119926597_119926667_119932423_119932550_119934799_119934959_119945080_119945241_119946340_119946425_119946517_119946575_119951972_119952130_119955156_119955324_119956843_119956935_119957015_119957078_119960806_119960954_119962615_119962745_119965496_119965646_119967836_119967973_119976983
H1_mix_00050069	chr2	+	3625	26	NIC	ENSG00000088179.9	novel	11090	27	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	3	8	junction_4	50.2826570499213	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTTTTGCAGTGGTTTGC	19	True	NA	24	True	AGTAAA	-18	NA	119759923	119977460	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_119760385_119809836_119809992_119862535_119862644_119877322_119877366_119877442_119877543_119882096_119882150_119882502_119882624_119885794_119885883_119900717_119900807_119915178_119915243_119920068_119920242_119926597_119926667_119932423_119932550_119934799_119934959_119945080_119945241_119946340_119946425_119946517_119946575_119951972_119952130_119955156_119955324_119956843_119956935_119957015_119957078_119960806_119960954_119962615_119962745_119965496_119965646_119967836_119967973_119976983
H1_mix_00050070	chr2	+	3504	26	NIC	ENSG00000088179.9	novel	11090	27	NA	NA	36	-11	combination_of_known_junctions	FALSE	canonical	3	14	junction_12	40.9116120435262	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCAGCTCTGGTCTTTTGC	36	False	NA	14	True	AGTAAA	-8	NA	119759989	119977450	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_119760385_119809836_119809992_119862535_119862644_119877322_119877366_119877463_119877543_119881785_119881831_119882096_119882150_119882502_119882624_119885794_119885883_119900717_119900807_119915178_119915243_119920068_119920242_119932423_119932550_119934799_119934959_119945080_119945241_119946340_119946425_119946517_119946575_119951972_119952130_119955156_119955324_119956843_119956935_119957015_119957078_119960806_119960954_119962615_119962745_119965496_119965646_119967836_119967973_119976983
H1_mix_00050072	chr2	+	3186	24	FSM	ENSG00000115109.14	ENST00000443902.6	3167	24	-19	0	-19	0	multi-exon	FALSE	canonical	2	10	junction_23	99.9103378753506	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATGAAACAAAAC	26	False	NA	NA	False	AATAAA	-20	NA	120013057	120175861	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_120013211_120019076_120019265_120042005_120042111_120073177_120073221_120074099_120074179_120075475_120075521_120075700_120075754_120076970_120077092_120077228_120077317_120078492_120078582_120087170_120087241_120090346_120090517_120091554_120091662_120093248_120093277_120100243_120100287_120100698_120100815_120127687_120127852_120131617_120131716_120143002_120143132_120146224_120146290_120160880_120160975_120164835_120164911_120167465_120167508_120174840
H1_mix_00050078	chr2	+	2257	5	FSM	ENSG00000144118.14	ENST00000420510.5	1252	5	6	-1011	6	0	multi-exon	FALSE	canonical	3	104	junction_1	116.203216392663	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTTTTTTTTGAATAAAAA	-1	True	NA	-1	True	AAAACA	-30	NA	120252810	120294676	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_120252981_120278614_120278779_120285873_120286083_120289579_120289758_120293140
H1_mix_00050082	chr2	+	306	3	FSM	ENSG00000074047.22	ENST00000418323.6	306	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	79.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCACGGGTAAGTCCTGCC	NA	False	NA	NA	False	NA	NA	NA	120792408	120927458	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_120792439_120797290_120797469_120927360
H1_mix_00050091	chr2	+	1127	3	FSM	ENSG00000211460.12	ENST00000498545.5	1118	3	-9	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	569.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGTATTAAGGGATTTA	-24	True	NA	26	True	ATTAAA	-36	NA	121755650	121765985	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_121755846_121763004_121763085_121765133
H1_mix_00050094	chr2	+	1018	4	FSM	ENSG00000136732.16	ENST00000259254.9	1018	4	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_1	21.2289111041209	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTCCGAGTCCAACAGTA	2	True	NA	14	True	AATAAA	-17	NA	126656157	126696667	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_126656313_126690254_126690312_126693863_126693948_126695945
H1_mix_00050095	chr2	+	1052	3	FSM	ENSG00000136732.16	ENST00000409836.3	932	3	-114	-6	-63	3	multi-exon	FALSE	canonical	3	58	junction_1	97.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCGAGTCCAACAGTATTA	16	False	NA	17	True	AATAAA	-20	NA	126656069	126696670	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_126656313_126693863_126693948_126695945
H1_mix_00050096	chr2	+	880	1	FSM	ENSG00000260163.1	ENST00000564121.1	4476	1	32	3564	32	-3564	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGTTTTTTCATTAGT	14	False	NA	NA	False	NA	NA	NA	127025242	127026122	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_127025200_127026100
H1_mix_00050101	chr2	+	10970	41	FSM	ENSG00000136731.13	ENST00000376723.7	6682	41	-39	-4249	-28	0	multi-exon	FALSE	canonical	2	15	junction_1	23.8899037252141	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGCAGTCATTTGGCCTT	-33	True	NA	39	True	AGTAAA	-22	NA	128091171	128195677	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_128091597_128097428_128097565_128103931_128104015_128107937_128108069_128109633_128109747_128113083_128113259_128115123_128115221_128116264_128116344_128120355_128120457_128121198_128121299_128123185_128123247_128127360_128127453_128129028_128129180_128133140_128133261_128134875_128134962_128138716_128138853_128143093_128143226_128145802_128145968_128152783_128152905_128155488_128155588_128156391_128156416_128157251_128157347_128159513_128159721_128160459_128160592_128161137_128161269_128164729_128164826_128170287_128170391_128171204_128171285_128172572_128172763_128173780_128173940_128174772_128174859_128176813_128176899_128177831_128177921_128178467_128178570_128179785_128179871_128180889_128181073_128182129_128182291_128183674_128183790_128186682_128186800_128187448_128187615_128189716
H1_mix_00050107	chr2	+	604	3	FSM	ENSG00000152082.15	ENST00000281871.11	599	3	-5	0	0	0	multi-exon	FALSE	canonical	3	2024	junction_2	1	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTGTCTACCGTTTTTT	-8	True	NA	41	True	AATAAA	-30	NA	130182256	130190727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_130182453_130182626_130182776_130190468
H1_mix_00050108	chr2	+	401	2	FSM	ENSG00000152082.15	ENST00000455239.1	401	2	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTCTACCGTTTTTTTT	48	False	NA	43	True	AATAAA	-32	NA	130182312	130190729	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_130182453_130190468
H1_mix_00050109	chr2	+	480	2	FSM	ENSG00000152082.15	ENST00000480182.1	480	2	0	0	0	0	multi-exon	FALSE	canonical	3	2024	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTGTCTACCGTTTTTT	290	False	NA	41	True	AATAAA	-30	NA	130182554	130190727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_130182776_130190468
H1_mix_00050112	chr2	+	2391	8	FSM	ENSG00000136718.10	ENST00000460766.5	2379	8	-12	0	0	0	multi-exon	FALSE	canonical	3	744	junction_5	66.9443875198524	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTGTGGTATTTTGT	19	True	NA	30	True	AATAAA	-19	NA	130342909	130347810	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_130343195_130344628_130344713_130345375_130345486_130345566_130345700_130345778_130345934_130346017_130346113_130346200_130346275_130346355
H1_mix_00050126	chr2	+	3800	12	FSM	ENSG00000136002.20	ENST00000392953.8	3800	12	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	29.4783854139193	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGCTGCTAGCCCGTT	746	False	NA	13	True	AATAAA	-13	NA	130917430	131047251	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_130917499_130930951_130931258_130946508_130946636_131027944_131028085_131038852_131039033_131040015_131040193_131040260_131040441_131041229_131041463_131041814_131041945_131043451_131043584_131044298_131044543_131045368
H1_mix_00050127	chr2	+	3580	11	NIC	ENSG00000136002.20	novel	2102	10	NA	NA	-264	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	26.4544892220583	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGCTGCTAGCCCGTT	NA	False	NA	13	True	AATAAA	-13	NA	130963377	131047251	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_130964250_131027944_131028085_131038852_131039033_131040015_131040193_131040260_131040441_131041229_131041463_131041814_131041945_131043451_131043584_131044298_131044543_131045368_131045447_131046037
H1_mix_00050128	chr2	+	907	5	FSM	ENSG00000136002.20	ENST00000439368.6	901	5	-6	0	-6	0	multi-exon	FALSE	canonical	3	31	junction_1	32.911813988293	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGCGTGGAGCTCTCCC	-5	True	NA	NA	False	NA	NA	NA	131034965	131041276	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_131035289_131038852_131039033_131040015_131040193_131040260_131040441_131041229
H1_mix_00050133	chr2	+	4195	8	FSM	ENSG00000115762.17	ENST00000234115.10	4208	8	0	13	0	-6	multi-exon	FALSE	canonical	3	112	junction_6	188.526401550639	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCATGTTTCATTGTGAC	158	False	NA	12	True	ATTAAA	-12	NA	131104943	131149839	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_131105399_131120933_131120979_131125752_131125906_131126683_131126787_131130720_131130761_131132901_131132992_131140169_131140276_131146636
H1_mix_00050134	chr2	+	3840	8	FSM	ENSG00000115762.17	ENST00000693505.1	3812	8	-34	6	0	-6	multi-exon	FALSE	canonical	3	464	junction_6	78.0329600690814	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCATGTTTCATTGTGAC	-4	True	NA	12	True	ATTAAA	-12	NA	131105301	131149839	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_131105399_131120933_131120979_131125752_131125906_131126683_131126787_131130720_131130761_131132901_131132992_131140166_131140276_131146636
H1_mix_00050138	chr2	+	3744	19	NNC	ENSG00000152117.18	novel	3785	18	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_8	40.1937053606318	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTCTGGCACCTGGGCTC	9	True	NA	34	True	AATAAA	-18	NA	131493091	131521573	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_131493141_131497209_131497294_131498866_131498954_131500203_131500347_131500505_131500582_131500961_131501071_131501180_131501234_131501357_131501509_131502454_131502693_131506311_131506443_131508536_131508609_131515601_131515748_131516313_131516405_131516856_131516958_131517726_131517891_131518502_131518709_131519049_131519284_131519534_131519667_131520096
H1_mix_00050139	chr2	+	3267	16	NIC	ENSG00000152117.18	novel	3785	18	NA	NA	10	-4	combination_of_known_splicesites	FALSE	canonical	3	13	junction_2	45.6386775541195	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTCTTCTGGCACCTGG	11	True	NA	30	True	AATAAA	-14	NA	131493093	131521569	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_131493141_131497209_131497294_131500203_131500347_131500505_131500582_131500961_131501071_131501180_131501234_131501357_131501509_131506311_131506443_131508536_131508609_131516313_131516405_131516856_131516958_131517726_131517891_131518502_131518709_131519049_131519284_131519534_131519667_131520096
H1_mix_00050140	chr2	+	3548	19	NNC	ENSG00000152117.18	novel	2762	19	NA	NA	13	-4	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_18	45.9828537555704	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTCTTCTGGCACCTGG	14	True	NA	30	True	AATAAA	-14	NA	131493096	131521569	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_131493141_131497209_131497294_131498866_131498954_131500203_131500347_131500505_131500582_131500961_131501071_131501180_131501234_131501357_131501509_131506311_131506443_131508536_131508609_131515601_131515748_131516313_131516405_131516856_131516958_131517726_131517891_131518502_131518631_131519049_131519284_131519534_131519667_131519813_131519943_131520096
H1_mix_00050141	chr2	+	1060	2	FSM	ENSG00000163040.15	ENST00000465939.1	1080	2	20	0	20	0	multi-exon	FALSE	canonical	3	197	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCTTGCCACTTGTCCA	9517	False	NA	NA	False	NA	NA	NA	131527694	131530180	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_131528221_131529646
H1_mix_00050142	chr2	+	1367	7	FSM	ENSG00000163040.15	ENST00000467992.6	1347	7	-20	0	-19	0	multi-exon	FALSE	canonical	2	3	junction_4	84.7120941122865	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTGTGTGCCTGGCTCCT	9636	False	NA	NA	False	AATAAA	-15	NA	131527813	131533664	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_131528221_131529646_131529692_131530578_131530828_131531663_131531803_131532863_131532938_131533012_131533070_131533268
H1_mix_00050144	chr2	+	1562	8	FSM	ENSG00000163040.15	ENST00000295171.10	1543	8	-19	0	-19	0	multi-exon	FALSE	canonical	3	97	junction_2	45.2002347835694	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	9636	False	NA	NA	False	AATAAA	-17	NA	131527813	131533666	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_131528221_131529646_131529692_131530578_131530828_131531663_131531803_131532588_131532782_131532863_131532938_131533012_131533070_131533268
H1_mix_00050145	chr2	+	1285	8	NNC	ENSG00000163040.15	novel	1543	8	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	75.4886124673444	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	-8	True	NA	NA	False	AATAAA	-17	NA	131527888	131533666	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_131528221_131529646_131529692_131530780_131530828_131531663_131531803_131532588_131532782_131532863_131532938_131533012_131533070_131533268
H1_mix_00050146	chr2	+	1141	8	NIC	ENSG00000163040.15	novel	1290	8	NA	NA	-8	-11	combination_of_known_junctions	FALSE	canonical	3	23	junction_4	72.223858345326	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATTTCCAAGTTGTGT	6	True	NA	NA	False	AATAAA	-4	NA	131527902	131533653	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_131528221_131529646_131529692_131530776_131530828_131531663_131531803_131532709_131532782_131532863_131532938_131533012_131533070_131533268
H1_mix_00050147	chr2	+	1368	8	NIC	ENSG00000163040.15	novel	1290	8	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	72.6652936274201	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	39	True	NA	NA	False	AATAAA	-17	NA	131527935	131533666	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_131528347_131529646_131529692_131530776_131530828_131531663_131531803_131532588_131532782_131532863_131532938_131533012_131533070_131533268
H1_mix_00050148	chr2	+	1392	8	NNC	ENSG00000163040.15	novel	1543	8	NA	NA	16	-4	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	73.1414620402666	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAAGTTGTGTGCCTGGC	53	False	NA	NA	False	AATAAA	-11	NA	131527949	131533660	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_131528221_131529646_131529692_131530606_131530828_131531663_131531803_131532588_131532782_131532863_131532938_131533012_131533070_131533268
H1_mix_00050157	chr2	+	816	3	FSM	ENSG00000152127.9	ENST00000468758.1	816	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCACTGTTTCTGGGAC	28	False	NA	NA	False	NA	NA	NA	134119982	134254644	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_134120292_134253094_134253219_134254261
H1_mix_00050158	chr2	+	5973	1	ISM	ENSG00000152127.9	ENST00000409645.5	8252	17	328467	0	194577	0	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGGAAGTGATTTTTGG	NA	False	NA	22	True	AATAAA	-15	NA	134448648	134454621	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_134448600_134454600
H1_mix_00050160	chr2	+	4494	10	FSM	ENSG00000082258.13	ENST00000295238.10	4491	10	-3	0	0	0	multi-exon	TRUE	canonical	3	161	junction_9	77.4622169946639	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGATTGTGTGAGCTATTC	-17	True	NA	10	True	ATTAAA	-23	NA	134918821	134957017	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_134919013_134919809_134919892_134936840_134936970_134939001_134939063_134942611_134942675_134946100_134946147_134947735_134947900_134952640_134952712_134953229_134954380_134954480
H1_mix_00050162	chr2	+	5185	10	NIC	ENSG00000082258.13	novel	4491	10	NA	NA	6	381	combination_of_known_junctions	FALSE	canonical	3	93	junction_6	111.438517622394	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCCTATAAAAGAGTGAGT	-8	True	NA	NA	False	ATTAAA	-17	NA	134918830	134957398	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_134919013_134919809_134919892_134936840_134936970_134939001_134939063_134942611_134942675_134946100_134946466_134947735_134947900_134952640_134952712_134953229_134954380_134954480
H1_mix_00050164	chr2	+	7214	9	NIC	ENSG00000082258.13	novel	6920	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	93	junction_6	101.41676081891	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGGCTCTAACATGTCT	8	True	NA	NA	False	AATAAA	-21	NA	134918846	134959342	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_134919013_134919809_134919892_134936840_134936970_134939001_134939063_134942611_134942675_134946100_134946466_134947735_134947900_134952640_134952712_134953229
H1_mix_00050165	chr2	+	1229	3	FSM	ENSG00000115839.19	ENST00000425393.1	1139	3	-6	-84	0	84	multi-exon	FALSE	canonical	3	106	junction_1	30.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGATTTACTACACTACAT	3	True	NA	NA	False	TATAAA	-36	NA	135052292	135059150	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_135052326_135052429_135052486_135058010
H1_mix_00050167	chr2	+	2375	3	FSM	ENSG00000048991.17	ENST00000463230.5	2241	3	-81	-53	-63	53	multi-exon	FALSE	canonical	3	298	junction_1	8.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTGACAGAGCAAGACTCC	NA	False	NA	NA	False	NA	NA	NA	135531391	135606729	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_135531634_135602499_135602709_135604805
H1_mix_00050168	chr2	+	4390	24	NIC	ENSG00000048991.17	novel	4781	27	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	65	junction_4	70.5183347701317	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGCTCACTTTGTCTT	-17	True	NA	NA	False	AATAAA	-10	NA	135531470	135725264	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_135531634_135602499_135602709_135604805_135605017_135616667_135616758_135621493_135621609_135622653_135622733_135631717_135631778_135631860_135632002_135635889_135635999_135636087_135636184_135638617_135638656_135638738_135638790_135638895_135639123_135645378_135645528_135651729_135652033_135661269_135661394_135675331_135675487_135680172_135680325_135709432_135709537_135710058_135710232_135715549_135715695_135721923_135722007_135722468_135722554_135723936
H1_mix_00050169	chr2	+	4292	23	NNC	ENSG00000048991.17	novel	4272	23	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_20	71.7734181554634	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGCTCACTTTGTCTTTT	-13	True	NA	NA	False	AATAAA	-12	NA	135531474	135725266	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_135531634_135602499_135602709_135604805_135605017_135621493_135621609_135622653_135622733_135631717_135631778_135631860_135632002_135635889_135635999_135636087_135636184_135638617_135638656_135638738_135638790_135638895_135639123_135645378_135645528_135651732_135652033_135661269_135661394_135675331_135675487_135680172_135680325_135709432_135709537_135710058_135710232_135715549_135715695_135721926_135722007_135722468_135722554_135723936
H1_mix_00050170	chr2	+	4269	23	NIC	ENSG00000048991.17	novel	4272	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	123	junction_13	46.5410376100295	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGCTCACTTTGTCTTTT	13	True	NA	NA	False	AATAAA	-12	NA	135531500	135725266	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_135531634_135602499_135602709_135604805_135605017_135621493_135621609_135622653_135622733_135631717_135631778_135631860_135632002_135635889_135635999_135636087_135636184_135638617_135638656_135638738_135638790_135638895_135639123_135645378_135645528_135651732_135652033_135661269_135661394_135675331_135675487_135680172_135680325_135709432_135709537_135710058_135710232_135715549_135715695_135721923_135722007_135722468_135722554_135723936
H1_mix_00050171	chr2	+	4272	23	FSM	ENSG00000048991.17	ENST00000409478.5	4272	23	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_13	44.9216259649942	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGCTCACTTTGTCTTTT	13	True	NA	NA	False	AATAAA	-12	NA	135531500	135725266	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_135531634_135602499_135602709_135604805_135605017_135621493_135621609_135622653_135622733_135631717_135631778_135631860_135632002_135635889_135635999_135636087_135636184_135638617_135638656_135638738_135638790_135638895_135639123_135645378_135645528_135651729_135652033_135661269_135661394_135675331_135675487_135680172_135680325_135709432_135709537_135710058_135710232_135715549_135715695_135721923_135722007_135722468_135722554_135723936
H1_mix_00050186	chr2	+	2850	2	FSM	ENSG00000121989.15	ENST00000465329.1	993	2	-582	-1275	-70	1275	multi-exon	FALSE	canonical	3	512	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGACATGATTTTAAATAT	88	False	NA	NA	False	NA	NA	NA	147844446	147898389	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_147845208_147896300
H1_mix_00050187	chr2	+	5214	11	FSM	ENSG00000121989.15	ENST00000241416.12	5214	11	0	0	0	0	multi-exon	FALSE	canonical	3	496	junction_2	35.6484221249693	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATTTGCATATGCAGTT	0	True	NA	11	True	AATAAA	-14	NA	147845028	147930822	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_147845208_147896300_147896509_147899457_147899568_147899743_147899899_147915190_147915335_147917282_147917427_147918446_147918593_147920229_147920345_147922972_147923112_147926030_147926162_147927079
H1_mix_00050191	chr2	+	1624	3	FSM	ENSG00000135999.12	ENST00000409654.5	1624	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTTTTTTCATTTCAT	259	False	NA	NA	False	AATAAA	-13	NA	148644998	148692833	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_148645171_148690213_148690374_148691541
H1_mix_00050193	chr2	+	6968	26	FSM	ENSG00000168280.18	ENST00000435030.6	6954	26	-14	0	-14	0	multi-exon	FALSE	canonical	3	160	junction_8	15.5614909311415	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTCTGTTTCTCCTTAT	9670	False	NA	NA	False	AATAAA	-17	NA	148875212	149026759	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_148875744_148922136_148922228_148929280_148929355_148937283_148937389_148941609_148941659_148941934_148941991_148942672_148942761_148946898_148947024_148949838_148949944_148950313_148950463_148961970_148962120_148973335_148973512_148978921_148978991_148981354_148981562_148983619_148983767_148991009_148991199_148994420_148994539_148997263_148997341_148998399_148998510_149000422_149000525_149000721_149000783_149005392_149005465_149007962_149008068_149010134_149010352_149011569_149011684_149023077
H1_mix_00050204	chr2	+	15003	35	FSM	ENSG00000080345.18	ENST00000243326.9	15003	35	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	49.8699433093195	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTACTTGTTTTTGTT	17	True	NA	NA	False	AATAAA	-16	NA	151409940	151482172	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_151410528_151411259_151411339_151414822_151414920_151416560_151416689_151416806_151416902_151420189_151420380_151422949_151423043_151428783_151428923_151433076_151433229_151435462_151435581_151436826_151437004_151437240_151437352_151438683_151438747_151440026_151440128_151441904_151441992_151443258_151443330_151443528_151443710_151445337_151445446_151446425_151446576_151451605_151451706_151454894_151455160_151456577_151456621_151457760_151457964_151458810_151458911_151459999_151460120_151461137_151461290_151462241_151462323_151462411_151462467_151462883_151466121_151467999_151468147_151468473_151468552_151468640_151468757_151469710_151469865_151473963_151474073_151474856
H1_mix_00050205	chr2	+	5802	27	NNC	ENSG00000157827.20	novel	5630	26	NA	NA	-78	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	26.8934177292467	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTAATATGTTGTAATC	NA	False	NA	28	True	AATAAA	-16	NA	152335095	152649826	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_152335721_152521942_152522027_152542738_152542820_152549020_152549098_152558739_152558824_152560882_152561036_152575135_152575245_152578887_152578965_152580955_152581050_152607338_152607414_152611494_152611606_152614850_152615001_152617090_152617193_152618845_152619159_152619508_152619719_152625437_152625563_152626524_152626728_152628298_152628534_152629655_152629725_152629824_152629906_152632007_152632138_152636426_152636591_152637572_152637675_152639957_152640057_152640790_152640915_152645433_152645528_152647795
H1_mix_00050206	chr2	+	5630	26	FSM	ENSG00000157827.20	ENST00000288670.14	5630	26	0	0	0	0	multi-exon	FALSE	canonical	1	18	junction_19	21.8805484391959	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTAATATGTTGTAATC	0	True	NA	28	True	AATAAA	-16	NA	152335173	152649826	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_152335721_152521942_152522027_152542738_152542820_152549020_152549098_152558739_152558824_152560882_152561036_152575135_152575245_152578887_152578965_152580955_152581050_152607338_152607414_152611494_152611606_152614850_152615001_152617090_152617193_152618845_152619159_152619508_152619719_152625437_152625563_152626524_152626728_152628298_152628534_152629655_152629725_152629824_152629906_152632007_152632138_152636426_152636591_152637572_152637675_152639957_152640057_152640790_152640915_152647795
H1_mix_00050208	chr2	+	1308	4	FSM	ENSG00000177917.12	ENST00000686839.1	1308	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	314.859051358258	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTATGTGAGAATGATT	237	False	NA	9	True	AATAAA	-15	NA	152717892	152760764	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_152717996_152720532_152720587_152734993_152735127_152759746
H1_mix_00050209	chr2	+	2387	5	FSM	ENSG00000177917.12	ENST00000691702.1	2176	5	-109	-102	0	0	multi-exon	FALSE	canonical	3	17	junction_3	366.580397048178	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTATGTGAGAATGATT	237	False	NA	9	True	AATAAA	-15	NA	152717892	152760764	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_152719025_152720532_152720587_152732530_152732581_152734993_152735127_152759746
H1_mix_00050211	chr2	+	465	5	FSM	ENSG00000177917.12	ENST00000425034.6	1681	5	405	811	1	78	multi-exon	FALSE	canonical	2	8	junction_1	341.555632364627	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGATATTGTTGGCAAAAC	16	False	NA	NA	False	NA	NA	NA	152718958	152759851	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_152719025_152719897_152720005_152720532_152720587_152734993_152735127_152759746
H1_mix_00050216	chr2	+	5703	21	FSM	ENSG00000144283.23	ENST00000389757.7	5777	21	-2	76	-2	-76	multi-exon	FALSE	canonical	0	0	junction_9	30.6970682639238	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTGGGCAGAAGATCTAAT	133	False	NA	NA	False	NA	NA	NA	158457096	158682803	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_158457219_158533179_158533317_158577270_158577384_158603069_158603105_158620989_158621122_158621230_158621422_158624877_158625428_158631752_158631942_158634069_158634290_158640626_158640760_158642485_158642700_158658130_158658315_158661332_158661451_158662896_158663089_158663271_158663446_158666412_158666564_158669719_158669916_158673676_158673762_158673882_158674001_158678580_158678655_158680428
H1_mix_00050220	chr2	+	4209	20	NIC	ENSG00000144283.23	novel	4603	22	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	35.6665846859199	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTCTCTATTCTTTTTA	137	False	NA	28	True	AATAAA	-24	NA	158457100	158681429	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_158457219_158533179_158533317_158603069_158603105_158620989_158621122_158621230_158621422_158624877_158625428_158631752_158631942_158634072_158634290_158640626_158640760_158642485_158642700_158658130_158658315_158661332_158661451_158662896_158663089_158663271_158663446_158666412_158666564_158669719_158669916_158673676_158673762_158673882_158674001_158678580_158678655_158680428
H1_mix_00050221	chr2	+	4501	21	NNC	ENSG00000144283.23	novel	5777	21	NA	NA	-38	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	32.5992331198143	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAATGTGTTCTCTATTCT	22	True	NA	23	True	AATAAA	-19	NA	158456913	158681424	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_158457219_158533179_158533317_158577270_158577384_158603069_158603105_158620989_158621116_158621230_158621422_158624877_158625428_158631752_158631942_158634069_158634290_158640626_158640760_158642485_158642700_158658130_158658315_158661332_158661451_158662896_158663089_158663271_158663446_158666412_158666564_158669719_158669916_158673676_158673762_158673882_158674001_158678580_158678655_158680428
H1_mix_00050230	chr2	+	5922	10	FSM	ENSG00000136536.15	ENST00000259050.8	5922	10	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_1	167.435633477539	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTTGTACTTAAGTGT	-12	True	NA	15	True	AATAAA	-27	NA	159712498	159771027	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_159712607_159729008_159729176_159743060_159743254_159745769_159745938_159747804_159748904_159752401_159752572_159759225_159759336_159762879_159762994_159764625_159764675_159767283
H1_mix_00050232	chr2	+	5970	10	NIC	ENSG00000136536.15	novel	6043	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	382	junction_1	146.286966416048	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTTGTACTTAAGTGT	-5	True	NA	15	True	AATAAA	-27	NA	159712505	159771027	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_159712662_159729008_159729176_159743060_159743254_159745769_159745938_159747804_159748904_159752401_159752572_159759225_159759336_159762879_159762994_159764625_159764675_159767283
H1_mix_00050234	chr2	+	3190	4	ISM	ENSG00000136560.14	ENST00000432692.6	576	7	-95	17187	-11	2474	5prime_fragment	FALSE	canonical	3	89	junction_1	27.7888866675551	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCAGTTCAGCTTTCTCTT	-8	True	NA	8	True	AATAAA	-18	NA	161160332	161207453	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_161160487_161179613_161179762_161203486_161203596_161204674
H1_mix_00050235	chr2	+	2137	8	NIC	ENSG00000136560.14	novel	2155	9	NA	NA	-6	-6	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	36.0175694088656	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCATTTGTATGTCCTTT	-3	True	NA	18	True	ATTAAA	-22	NA	161160337	161236181	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_161160485_161179613_161179762_161203486_161203596_161204674_161204794_161223914_161223992_161224630_161224747_161230970_161231552_161235341
H1_mix_00050242	chr2	+	1630	8	FSM	ENSG00000115271.11	ENST00000233612.8	1694	8	64	0	64	0	multi-exon	FALSE	canonical	3	9	junction_1	138.173508196568	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTCAGAAATTTTACATT	20	True	NA	11	True	AATAAA	-21	NA	162344401	162361122	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_162344526_162347577_162347743_162352337_162352408_162356437_162356482_162356757_162356906_162359043_162359158_162359493_162359553_162360216
H1_mix_00050247	chr2	+	5094	1	ISM	ENSG00000172318.6	ENST00000392690.4	5850	5	575947	4	575947	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGTGTCACTTCTCTTC	NA	False	NA	12	True	AATAAA	-12	NA	167868947	167874041	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_167868900_167874000
H1_mix_00050249	chr2	+	3164	12	FSM	ENSG00000163093.12	ENST00000295240.8	3159	12	-5	0	-5	0	multi-exon	FALSE	canonical	3	10	junction_7	3.21926021993196	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAACGTTTTGAAAGTATT	17	True	NA	5	True	AATAAA	-18	NA	169479488	169506655	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_169479613_169482250_169482334_169487068_169487135_169487805_169487856_169487986_169488115_169492873_169493010_169493740_169493837_169497626_169497690_169499485_169499621_169503094_169503179_169504302_169504327_169504480
H1_mix_00050254	chr2	+	6731	14	FSM	ENSG00000138398.17	ENST00000678499.1	6453	14	-280	2	0	0	multi-exon	FALSE	canonical	3	139	junction_1	96.7132649707463	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAACTATACTATAATAAAC	8	True	NA	-4	True	ATTAAA	-1	NA	169584366	169641387	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_169584900_169603641_169603695_169604025_169604103_169604186_169604262_169606038_169606147_169607103_169607149_169608670_169608759_169614463_169614494_169614584_169614725_169630773_169630988_169631765_169631934_169633159_169633248_169636091_169636229_169636412
H1_mix_00050255	chr2	+	6371	15	NIC	ENSG00000138398.17	novel	6357	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	14	junction_10	164.998098319282	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAACTATACTATAATAAAC	8	True	NA	-4	True	ATTAAA	-1	NA	169584366	169641387	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_169584491_169603641_169603695_169604025_169604103_169604186_169604262_169606038_169606147_169607103_169607149_169608670_169608759_169614463_169614494_169614584_169614725_169630773_169630988_169631598_169631648_169631765_169631934_169633159_169633248_169636091_169636229_169636412
H1_mix_00050262	chr2	+	4105	4	FSM	ENSG00000213160.10	ENST00000392647.7	4081	4	-24	0	-24	0	multi-exon	FALSE	canonical	3	329	junction_3	31.5066130624456	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGTAAGACTGCTTGAAT	NA	False	NA	13	True	AATAAA	-15	NA	169733807	169751878	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_169734088_169735012_169736228_169741384_169741538_169749421
H1_mix_00050263	chr2	+	628	4	FSM	ENSG00000138385.16	ENST00000461708.1	619	4	-9	0	0	0	multi-exon	FALSE	canonical	3	3126	junction_3	135.816870167966	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTCACGTTGGAGTGCAG	2	True	NA	NA	False	NA	NA	NA	169798870	169806007	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_169798977_169800951_169801027_169805473_169805578_169805664
H1_mix_00050265	chr2	+	1782	12	FSM	ENSG00000138385.16	ENST00000409333.1	1782	12	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	898.630105280088	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTTTGATTTTTTTTTT	364	False	NA	39	True	AATAAA	-28	NA	169799278	169812064	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_169799517_169800951_169801027_169805473_169805578_169805664_169805840_169806784_169806893_169806970_169807072_169808481_169808554_169808859_169808903_169810282_169810424_169810857_169811045_169811182_169811324_169811667
H1_mix_00050271	chr2	+	3063	2	FSM	ENSG00000204335.4	ENST00000487037.1	257	2	-1133	-1673	-428	83	multi-exon	FALSE	canonical	3	35	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAAAGAGGTAGGGCAAGA	NA	False	NA	NA	False	NA	NA	NA	170714908	170718161	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_170716069_170716258
H1_mix_00050277	chr2	+	1503	3	FSM	ENSG00000239467.7	ENST00000664870.2	1628	3	123	2	10	0	multi-exon	FALSE	canonical	3	11	junction_1	39	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTTGTCTTTGAGGGAT	14	True	NA	2	True	AATAAA	-13	NA	170771057	170778727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_170771428_170777376_170777426_170777643
H1_mix_00050278	chr2	+	1084	8	Fusion	ENSG00000204334.7_ENSG00000239467.7	novel	1363	6	NA	NA	-8	6	intron_retention	FALSE	canonical	3	11	junction_1	24.7559516653499	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCCTTATTTGGTACAG	5	True	NA	44	True	TATAAA	-23	NA	170771104	170798977	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr2_+_170771428_170777376_170777426_170777643_170777681_170782240_170782390_170784645_170784834_170792862_170792921_170798040_170798113_170798769
H1_mix_00050279	chr2	+	1111	4	FSM	ENSG00000239467.7	ENST00000688829.1	1041	4	401	-471	61	0	multi-exon	FALSE	canonical	3	21	junction_1	27.956315128349	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGACAGAGGACCTTAT	238	False	NA	9	True	ATTAAA	-22	NA	170771337	170778584	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_170771428_170777146_170777178_170777376_170777426_170777643
H1_mix_00050297	chr2	+	2571	16	FSM	ENSG00000077380.16	ENST00000340296.8	2589	16	18	0	18	0	multi-exon	FALSE	canonical	3	363	junction_1	104.211750243861	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCAAATTTTCATTTTT	NA	False	NA	5	True	AATAAA	-17	NA	171687426	171748411	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_171687628_171690146_171690264_171692776_171692895_171707286_171707378_171715327_171715444_171725617_171725714_171725918_171726082_171726193_171726294_171726790_171726917_171727820_171727968_171728304_171728419_171728716_171728851_171729708_171729854_171744048_171744190_171745801_171745928_171747775
H1_mix_00050299	chr2	+	2196	17	FSM	ENSG00000077380.16	ENST00000409317.5	2196	17	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_4	218.449615186203	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATGCAGCAAGGAAACTT	177	False	NA	19	True	ATTAAA	-29	NA	171687707	171748011	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_171687874_171690146_171690264_171692776_171692895_171707286_171707378_171712766_171712827_171715327_171715444_171725617_171725714_171725918_171726082_171726193_171726294_171726790_171726917_171727820_171727968_171728304_171728419_171728716_171728851_171729708_171729854_171744048_171744190_171745801_171745928_171747775
H1_mix_00050300	chr2	+	2572	16	FSM	ENSG00000077380.16	ENST00000409197.5	2572	16	0	0	0	0	multi-exon	FALSE	canonical	3	557	junction_1	70.1136854607493	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCAAATTTTCATTTTT	141	False	NA	5	True	AATAAA	-17	NA	171687671	171748411	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_171687874_171690146_171690264_171692776_171692895_171707286_171707378_171715327_171715444_171725617_171725714_171725918_171726082_171726193_171726294_171726790_171726917_171727820_171727968_171728304_171728419_171728716_171728851_171729708_171729854_171744048_171744190_171745801_171745928_171747775
H1_mix_00050304	chr2	+	3530	11	FSM	ENSG00000128708.13	ENST00000494601.5	3845	11	315	0	315	0	multi-exon	FALSE	canonical	2	10	junction_1	275.54266457302	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTAATGTGTGATGATA	453	False	NA	14	True	AATAAA	-14	NA	171922921	171983623	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_171924928_171925536_171925642_171946707_171946784_171952880_171953002_171965337_171965518_171965786_171965909_171966408_171966514_171966842_171966950_171976156_171976309_171979246_171979364_171983184
H1_mix_00050308	chr2	+	5682	25	FSM	ENSG00000091409.16	ENST00000409080.6	5686	25	0	4	0	-4	multi-exon	FALSE	canonical	3	491	junction_9	59.9867896336815	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATTGGGAGTTGTCTTTG	-3	True	NA	23	True	ATTAAA	-28	NA	172427585	172506455	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_172427971_172465538_172465664_172467480_172467561_172469124_172469381_172470973_172471106_172474054_172474266_172474928_172475123_172475596_172475686_172476394_172476514_172479640_172479740_172479989_172480052_172484781_172484943_172485120_172485265_172487022_172487139_172487263_172487454_172487546_172487631_172487727_172487808_172487960_172488039_172488125_172488229_172489484_172489659_172491023_172491123_172491220_172491332_172491424_172491524_172497974_172498101_172504090
H1_mix_00050309	chr2	+	5812	26	FSM	ENSG00000091409.16	ENST00000684293.1	5816	26	0	4	0	-4	multi-exon	FALSE	canonical	3	42	junction_25	162.509637868035	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATTGGGAGTTGTCTTTG	-3	True	NA	23	True	ATTAAA	-28	NA	172427585	172506455	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_172427971_172465538_172465664_172467480_172467561_172469124_172469381_172470973_172471106_172474054_172474266_172474928_172475123_172475596_172475686_172476394_172476514_172479640_172479740_172479989_172480052_172484781_172484943_172485120_172485265_172487022_172487139_172487263_172487454_172487546_172487631_172487727_172487808_172487960_172488039_172488125_172488229_172489484_172489659_172491023_172491123_172491220_172491332_172491424_172491524_172497974_172498101_172501771_172501902_172504090
H1_mix_00050324	chr2	+	3216	9	NIC	ENSG00000144354.14	novel	2500	9	NA	NA	6	0	intron_retention	FALSE	canonical	3	80	junction_4	243.56053533978	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTCTGCTTTTTTAAAAA	36	False	NA	18	True	AATAAA	-14	NA	173354898	173368904	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_173354985_173358711_173358838_173363225_173363463_173363817_173363896_173363999_173364990_173365451_173365593_173366282_173366433_173367149_173367287_173367633
H1_mix_00050333	chr2	+	1128	7	FSM	ENSG00000128654.14	ENST00000443241.5	799	7	-64	-265	11	-81	multi-exon	FALSE	canonical	2	13	junction_1	214.537228056629	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTACTTTCTTTTGATTT	NA	False	NA	18	True	AATAAA	-25	NA	176269405	176337944	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_176269670_176326824_176326902_176328292_176328386_176328873_176328913_176329300_176329427_176330583_176330661_176337492
H1_mix_00050334	chr2	+	1360	10	FSM	ENSG00000128654.14	ENST00000249442.11	1341	10	-19	0	-19	0	multi-exon	FALSE	canonical	3	489	junction_1	45.0801754901445	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTTGTGTTACATACTC	-15	True	NA	10	True	AATAAA	-21	NA	176269422	176338025	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_176269670_176296859_176296908_176297848_176297896_176323391_176323465_176326824_176326902_176328292_176328386_176328873_176328913_176329300_176329427_176330583_176330661_176337492
H1_mix_00050335	chr2	+	1564	11	FSM	ENSG00000128654.14	ENST00000420864.5	1592	11	28	0	-19	0	multi-exon	FALSE	canonical	3	22	junction_1	216.426800558526	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTTGTGTTACATACTC	-15	True	NA	10	True	AATAAA	-21	NA	176269422	176338025	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_176269670_176270215_176270420_176296859_176296908_176297848_176297896_176323391_176323465_176326824_176326902_176328292_176328386_176328873_176328913_176329300_176329427_176330583_176330661_176337492
H1_mix_00050337	chr2	+	5697	12	FSM	ENSG00000170144.21	ENST00000679159.1	5697	12	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_11	1031.7772679113	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGTAAGTAATAAAACAACAG	NA	False	NA	-23	True	NA	NA	NA	177212693	177223929	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_177212872_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177217704_177217846_177219036_177219160_177219246_177219315_177219407_177221977_177222059
H1_mix_00050338	chr2	+	2926	10	FSM	ENSG00000170144.21	ENST00000677043.1	2926	10	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_9	1300.8990433495	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATAGGTGAATATTTTGA	NA	False	NA	51	True	NA	NA	NA	177212723	177223898	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_177212872_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177219036_177219160_177219246_177219315_177222059
H1_mix_00050339	chr2	+	5750	11	FSM	ENSG00000170144.21	ENST00000676629.1	5750	11	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_10	1049.59089172877	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTTACCAGTAAGTAAT	NA	False	NA	-33	True	NA	NA	NA	177212723	177223919	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_177212872_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177217704_177217846_177219036_177219160_177219246_177221977_177222059
H1_mix_00050341	chr2	+	5600	10	FSM	ENSG00000170144.21	ENST00000676681.1	5600	10	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_7	1028.56307536291	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTACCAGTAAGTAATA	NA	False	NA	-32	True	NA	NA	NA	177212723	177223920	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_177212872_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177219036_177219160_177219246_177219315_177219407
H1_mix_00050342	chr2	+	6226	8	FSM	ENSG00000170144.21	ENST00000676762.1	6209	8	-17	0	0	0	multi-exon	FALSE	canonical	3	2335	junction_1	487.215955973429	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTACCAGTAAGTAATA	NA	False	NA	-32	True	NA	NA	NA	177212723	177223920	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_177212872_177215538_177215662_177215749_177215897_177215977_177216941_177217704_177217846_177219036_177219160_177219246_177219315_177219407
H1_mix_00050343	chr2	+	5829	10	FSM	ENSG00000170144.21	ENST00000678421.1	5829	10	0	0	0	0	multi-exon	FALSE	canonical	3	2335	junction_1	440.277942516618	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTACCAGTAAGTAATA	NA	False	NA	-32	True	NA	NA	NA	177212723	177223920	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_177212872_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216941_177217704_177217846_177219036_177219160_177219246_177219315_177219407
H1_mix_00050344	chr2	+	3111	11	FSM	ENSG00000170144.21	ENST00000678111.1	3111	11	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_10	1023.57313368415	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACAGGAAACTTGGAGTG	NA	False	NA	-10	True	AATAAA	-1	NA	177212723	177223942	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_177212872_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177217704_177217846_177219036_177219160_177219246_177219315_177222059
H1_mix_00050345	chr2	+	3045	11	FSM	ENSG00000170144.21	ENST00000676874.1	3028	11	-17	0	0	0	multi-exon	FALSE	canonical	3	146	junction_10	1223.11465120814	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACAGGAAACTTGGAGTG	NA	False	NA	-10	True	AATAAA	-1	NA	177212723	177223942	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_177212806_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177217704_177217846_177219036_177219160_177219246_177219315_177222059
H1_mix_00050346	chr2	+	6122	9	FSM	ENSG00000170144.21	ENST00000483137.2	6122	9	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_8	1164.74589503462	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTTACCAGTAAGTAAT	NA	False	NA	-33	True	NA	NA	NA	177212748	177223919	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_177212872_177215538_177215662_177215749_177215897_177215977_177216772_177216859_177216941_177217704_177217846_177219036_177219160_177219246_177221977_177222059
H1_mix_00050347	chr2	+	5964	10	FSM	ENSG00000170144.21	ENST00000677508.1	5953	10	-11	0	0	0	multi-exon	FALSE	canonical	3	702	junction_1	915.750505134625	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTACCAGTAAGTAATA	NA	False	NA	-32	True	NA	NA	NA	177212748	177223920	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_177212806_177215538_177215662_177215749_177215897_177215977_177216593_177216675_177216772_177216859_177216941_177217704_177217846_177219036_177219160_177219246_177219315_177219407
H1_mix_00050348	chr2	+	5688	11	FSM	ENSG00000170144.21	ENST00000411529.6	5688	11	0	0	0	0	multi-exon	FALSE	canonical	3	702	junction_1	869.440647773038	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAGCCTTTATCAGTTAT	NA	False	NA	6	True	AATAAA	-17	NA	177212748	177223958	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_177212806_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177217704_177217846_177219036_177219160_177219246_177219315_177219407
H1_mix_00050353	chr2	+	7009	25	FSM	ENSG00000079156.17	ENST00000190611.9	10652	25	-12	3655	0	-194	multi-exon	FALSE	canonical	3	27	junction_3	7.20532210707243	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTTAAGATTAAAGTATTT	7	True	NA	NA	False	TATAAA	-3	NA	178194499	178399238	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_178194675_178284926_178285122_178306029_178306287_178324176_178324270_178328255_178328379_178331551_178331606_178332640_178332755_178332870_178333042_178336300_178336434_178338990_178339095_178339671_178339765_178349223_178349390_178361681_178361816_178372125_178372234_178373889_178374028_178382419_178382508_178383023_178383278_178384038_178384177_178385457_178385522_178387060_178387140_178389008_178389154_178391072_178391218_178392411_178392539_178394312_178394436_178395450
H1_mix_00050356	chr2	+	3038	6	FSM	ENSG00000204311.15	ENST00000375129.8	1202	6	-1836	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	2.48193472919817	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGAAAAATGAATACACCG	49	False	NA	NA	False	NA	NA	NA	178451430	178461274	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_178453621_178454331_178454528_178456009_178456152_178458509_178458628_178460347_178460447_178460981
H1_mix_00050368	chr2	+	1359	6	FSM	ENSG00000170035.16	ENST00000392415.6	1347	6	-12	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	352.151331106387	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTTCCTGTCGTAATAT	5	True	NA	14	True	AATAAA	-16	NA	180980372	181063424	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_180980547_180982017_180982237_180984042_180984094_181057692_181057826_181060664_181060813_181062790
H1_mix_00050369	chr2	+	1555	6	FSM	ENSG00000170035.16	ENST00000410062.9	1555	6	0	0	0	0	multi-exon	FALSE	canonical	3	660	junction_1	95.4869624608512	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTCCTGTCGTAATATT	-7	True	NA	15	True	AATAAA	-17	NA	180980604	181063425	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_180980974_180982017_180982237_180984042_180984094_181057692_181057826_181060664_181060813_181062790
H1_mix_00050373	chr2	+	282	4	FSM	ENSG00000115232.14	ENST00000473002.1	573	4	291	0	291	0	multi-exon	FALSE	canonical	3	8	junction_1	0.471404520791032	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATAGAACGAAATTTGAC	NA	False	NA	NA	False	NA	NA	NA	181493324	181495832	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_181493420_181494721_181494813_181495370_181495417_181495782
H1_mix_00050375	chr2	+	5137	17	FSM	ENSG00000138434.17	ENST00000409001.5	4987	17	-152	2	0	-2	multi-exon	FALSE	canonical	3	10	junction_14	6.85109480302236	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTTTTAGTGGTTTCTT	4	True	NA	12	True	AATAAA	-17	NA	181891832	181930736	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_181892278_181892614_181892661_181896029_181896080_181896907_181896965_181898879_181898920_181899013_181899113_181900695_181900905_181901765_181902467_181909898_181909972_181913844_181913934_181915215_181916428_181918597_181918676_181918754_181918883_181919295_181919447_181921947_181922413_181928160_181928279_181929560
H1_mix_00050376	chr2	+	810	4	FSM	ENSG00000150722.11	ENST00000479855.1	501	4	-130	-179	-130	5	multi-exon	FALSE	canonical	3	16	junction_3	5.35412613473634	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGTGTGTGTGTGTGTGT	NA	False	NA	11	True	AATAAA	-21	NA	182030752	182117690	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_182030980_182061441_182061480_182063730_182063792_182117206
H1_mix_00050377	chr2	+	13866	23	FSM	ENSG00000077232.19	ENST00000616986.5	20006	23	-227	6367	-225	-6367	multi-exon	FALSE	canonical	3	88	junction_10	139.93705786992	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTTCCTACAGAGAAGGG	25	False	NA	NA	False	GATAAA	-32	NA	182716029	182788097	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_182716484_182717015_182717073_182717940_182718291_182720006_182720170_182722024_182722076_182728575_182728659_182728862_182728995_182729847_182729942_182731029_182731108_182732498_182732543_182740298_182740389_182741242_182741357_182743597_182743713_182751657_182751786_182752071_182752189_182755002_182755105_182756313_182756470_182757691_182757826_182758836_182758891_182759159_182759308_182762681_182762802_182775315_182775421_182777120
H1_mix_00050381	chr2	+	1569	9	FSM	ENSG00000163002.13	ENST00000295119.9	1545	9	-24	0	0	0	multi-exon	FALSE	canonical	3	260	junction_4	28.8593030927637	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTATTAGTCTGTTTGCA	13	True	NA	27	True	AATAAA	-15	NA	183124418	183161680	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_183124498_183128286_183128458_183130417_183130546_183133565_183133624_183151507_183151650_183157443_183157514_183158282_183158412_183159487_183159653_183161053
H1_mix_00050389	chr2	+	1891	3	NNC	ENSG00000289205.1	novel	1739	2	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	318	junction_1	111	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGTCTGAGGGATTTT	338	False	NA	29	True	AATAAA	-17	NA	188033795	188040601	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_188034061_188035602_188035757_188039129
H1_mix_00050390	chr2	+	2631	3	NNC	ENSG00000289205.1	novel	1739	2	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_1	233.5	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGTCTGAGGGATTTT	347	False	NA	29	True	AATAAA	-17	NA	188033804	188040601	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_188034061_188034853_188035757_188039129
H1_mix_00050393	chr2	+	1595	7	FSM	ENSG00000144366.16	ENST00000410051.5	1595	7	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_1	173.955933117174	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACTTAAAATAATGAAAGT	20	False	NA	NA	False	NA	NA	NA	188291945	188542122	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_188292167_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180
H1_mix_00050394	chr2	+	3469	13	NNC	ENSG00000144366.16	novel	3347	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	229.074754295526	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATTGCATAATTCATTT	-6	True	NA	NA	False	AATAAA	-15	NA	188292771	188595926	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_188293113_188334340_188334466_188383760_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180_188541319_188569238_188569356_188570027_188570121_188584264_188584404_188587854_188587950_188593939
H1_mix_00050395	chr2	+	3347	12	FSM	ENSG00000144366.16	ENST00000359135.7	3347	12	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_1	110.391115344974	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCATAATTCATTTGTTAA	-6	True	NA	NA	False	AATAAA	-20	NA	188292771	188595931	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_188293113_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180_188541319_188569238_188569356_188570027_188570121_188584264_188584404_188587854_188587950_188593939
H1_mix_00050396	chr2	+	7427	3	FSM	ENSG00000144366.16	ENST00000451191.5	7427	3	0	0	0	0	multi-exon	FALSE	canonical	3	556	junction_1	13.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACCCA	9	False	NA	36	True	NA	NA	NA	188570037	188595059	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_188570121_188584264_188584404_188587854
H1_mix_00050397	chr2	+	2659	21	FSM	ENSG00000115368.10	ENST00000314761.9	2647	21	-12	0	0	0	multi-exon	FALSE	canonical	3	398	junction_16	39.6382075780427	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGATAATATGAACATGTAT	-12	True	NA	26	True	AATAAA	-29	NA	189441461	189475552	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_189441579_189448378_189448509_189450902_189450969_189451804_189451896_189455319_189455445_189457310_189457382_189458752_189458873_189459335_189459425_189462483_189462643_189463693_189463754_189463845_189463962_189465078_189465255_189466424_189466583_189467467_189467649_189468474_189468570_189469343_189469440_189470075_189470246_189470818_189470879_189474185_189474333_189474716_189474809_189475212
H1_mix_00050398	chr2	+	2431	6	FSM	ENSG00000138381.10	ENST00000260952.9	2411	6	-20	0	0	0	multi-exon	FALSE	canonical	3	399	junction_5	53.777318638995	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTGAATTTTCATTTT	-34	True	NA	67	True	TTTAAA	-6	NA	189661438	189670831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_189661611_189663900_189663955_189665375_189665452_189666040_189667597_189667763_189667946_189670440
H1_mix_00050399	chr2	+	589	4	FSM	ENSG00000138381.10	ENST00000425590.1	567	4	-22	0	-22	0	multi-exon	FALSE	canonical	3	86	junction_2	203.201596669143	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATGGAATGGAGAAATTTT	NA	False	NA	-31	True	NA	NA	NA	189661416	189666351	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_189661611_189663900_189663955_189665421_189665452_189666040
H1_mix_00050402	chr2	+	1871	4	FSM	ENSG00000064933.19	ENST00000409985.5	1882	4	0	11	0	-11	multi-exon	FALSE	canonical	3	384	junction_3	38.5054108751831	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTCAAATGACTTCTG	-43	True	NA	14	True	ATTAAA	-12	NA	189784449	189807043	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_189784594_189791789_189791942_189795768_189795952_189805651
H1_mix_00050403	chr2	+	3156	13	FSM	ENSG00000064933.19	ENST00000441310.7	3156	13	0	0	0	0	multi-exon	FALSE	canonical	3	359	junction_10	44.7911046476368	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGATTCTCAAGAACCAAC	-43	True	NA	28	True	AATAAA	-18	NA	189784449	189877629	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_189784594_189791789_189791942_189795768_189795952_189805651_189805755_189818016_189818181_189843963_189844081_189852654_189852778_189853938_189854083_189854238_189855129_189863742_189864229_189867798_189867930_189873495_189873657_189877271
H1_mix_00050405	chr2	+	2153	8	FSM	ENSG00000064933.19	ENST00000424307.5	2153	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	134.890885609103	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGCCAATTATGTTAAC	7297	False	NA	NA	False	CATAAA	-19	NA	189791789	189864202	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_189791942_189805651_189805755_189818016_189818181_189843963_189844081_189852654_189852778_189853938_189854083_189854238_189855129_189863742
H1_mix_00050415	chr2	+	4489	15	FSM	ENSG00000115419.13	ENST00000338435.8	4475	15	-14	0	-1	0	multi-exon	FALSE	canonical	3	289	junction_1	37.358167153398	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATTGTTTTTTTTGTTT	0	True	NA	16	True	AATAAA	-16	NA	190880819	190935289	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_190881471_190895151_190895249_190895603_190895726_190900563_190900694_190901946_190902027_190905003_190905168_190910262_190910322_190921023_190921057_190921144_190921204_190923916_190923984_190924542_190924594_190927305_190927483_190930436_190930569_190931544_190931638_190932715
H1_mix_00050416	chr2	+	4841	18	FSM	ENSG00000115419.13	ENST00000320717.8	4840	18	-1	0	-1	0	multi-exon	FALSE	canonical	3	28	junction_17	141.046189887075	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTGTGGAAAAAATGAATT	0	True	NA	21	True	AATAAA	-21	NA	190880819	190965552	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_190881471_190895151_190895249_190895603_190895726_190900563_190900694_190901946_190902027_190905003_190905168_190910262_190910322_190921023_190921057_190921144_190921204_190923916_190923984_190924542_190924594_190927305_190927483_190930436_190930569_190931544_190931638_190953564_190953627_190954583_190954661_190954754_190954819_190962829
H1_mix_00050423	chr2	+	11501	6	FSM	ENSG00000173559.15	ENST00000410026.7	11524	6	19	4	8	-4	multi-exon	FALSE	canonical	2	2	junction_1	8.57904423581089	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATATGTATTTTGCTTTT	-5	True	NA	NA	False	AATAAA	-10	NA	191678154	191696658	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_191678242_191678989_191679129_191681945_191682018_191683728_191683805_191684229_191684297_191685598
H1_mix_00050437	chr2	+	636	3	FSM	ENSG00000115541.11	ENST00000409468.1	570	3	0	-66	0	-1	multi-exon	FALSE	canonical	3	12424	junction_1	284.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGTTAATCTTTAGTTAT	-3	True	NA	17	True	AATAAA	-13	NA	197500378	197503448	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_197500440_197501073_197501239_197503038
H1_mix_00050438	chr2	+	557	4	FSM	ENSG00000115541.11	ENST00000233893.10	557	4	0	0	0	0	multi-exon	FALSE	canonical	3	12424	junction_1	238.481771956591	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTTAATCTTTAGTTATT	-3	True	NA	18	True	AATAAA	-14	NA	197500378	197503449	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_197500440_197501073_197501239_197503038_197503129_197503208
H1_mix_00050439	chr2	+	3667	7	FSM	ENSG00000115540.15	ENST00000417097.5	1198	7	-31	-2438	-4	-7	multi-exon	FALSE	canonical	3	33	junction_2	512.976607653799	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTATTTCTTCAAGCAT	-22	True	NA	15	True	AGTAAA	-9	NA	197516042	197553692	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_197516147_197523623_197523687_197540110_197540154_197540350_197540438_197548335_197548416_197550274_197550387_197550514
H1_mix_00050440	chr2	+	3768	8	FSM	ENSG00000115540.15	ENST00000323303.9	3752	8	-16	0	3	0	multi-exon	FALSE	canonical	3	1153	junction_7	137.169193899731	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTCAAGCATCTCATTG	-15	True	NA	22	True	AGTAAA	-16	NA	197516049	197553699	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_197516147_197523623_197523687_197535529_197535631_197540110_197540154_197540350_197540438_197548335_197548416_197550274_197550387_197550514
H1_mix_00050441	chr2	+	3719	7	FSM	ENSG00000115540.15	ENST00000448447.6	1021	7	3	-2701	3	14	multi-exon	FALSE	canonical	3	249	junction_1	441.517710730712	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATTGTTAACAGACAATAC	-15	True	NA	36	True	AGTAAA	-30	NA	197516049	197553713	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_197516147_197535529_197535631_197540110_197540154_197540350_197540438_197548335_197548416_197550274_197550387_197550514
H1_mix_00050444	chr2	+	1777	1	FSM	ENSG00000225953.4	ENST00000668832.1	1663	1	-117	3	-117	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATATTTGTTTGGTTTCGT	820	False	NA	3	True	AATAAA	-17	NA	199459642	199461419	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_199459600_199461400
H1_mix_00050445	chr2	+	3709	2	FSM	ENSG00000178074.6	ENST00000319974.6	3691	2	-18	0	-18	0	multi-exon	FALSE	canonical	3	229	junction_1	0	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTGGATGTGCTTTA	18	False	NA	17	True	ATTAAA	-18	NA	199911274	199928273	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_199911772_199925061
H1_mix_00050447	chr2	+	1386	5	FSM	ENSG00000162972.11	ENST00000392290.6	1399	5	21	-8	21	8	multi-exon	FALSE	canonical	3	289	junction_2	15.9608896995124	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTATATATTTTTTAA	32	False	NA	17	True	AATAAA	-28	NA	199955602	199964125	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_199956249_199959267_199959340_199959753_199959881_199961780_199961929_199963732
H1_mix_00050449	chr2	+	2985	13	FSM	ENSG00000196141.14	ENST00000409988.7	2698	13	-165	-122	0	121	multi-exon	FALSE	canonical	3	215	junction_1	383.716221821399	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTGAGACAAGTACTCTT	-1	True	NA	-4	True	AATAAA	-9	NA	200305985	200478651	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_200306602_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200439121_200439329_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200473053_200477635
H1_mix_00050450	chr2	+	2119	12	FSM	ENSG00000196141.14	ENST00000360760.9	2119	12	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	313.609300545168	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGCTAGTTTCTTTTA	-1	True	NA	19	True	ATTAAA	-16	NA	200306523	200478530	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_200306602_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200473053_200477635
H1_mix_00050453	chr2	+	6212	13	FSM	ENSG00000196141.14	ENST00000409140.8	6212	13	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_7	295.837652550629	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTATTCTTAGTTT	-5	True	NA	NA	False	AATAAA	-13	NA	200306692	200482264	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_200306923_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200439121_200439329_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200473053_200477635
H1_mix_00050454	chr2	+	2271	12	NIC	ENSG00000196141.14	novel	6212	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	864	junction_6	145.847593950524	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGCTAGTTTCTTTTA	-5	True	NA	19	True	ATTAAA	-16	NA	200306692	200478530	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_200306923_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200473053_200477635
H1_mix_00050457	chr2	+	1158	3	FSM	ENSG00000196141.14	ENST00000460095.1	775	3	0	-383	0	0	multi-exon	FALSE	canonical	3	119	junction_2	555	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTGGCTAGTTTCTTTT	NA	False	NA	18	True	ATTAAA	-15	NA	200469913	200478529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_200470017_200472831_200472993_200477635
H1_mix_00050458	chr2	+	4478	9	FSM	ENSG00000163535.18	ENST00000357799.9	4478	9	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_5	14.4892201308421	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAATACACAGTTTATTG	40	True	NA	NA	False	AATAAA	-17	NA	200526206	200584096	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_200526253_200532973_200533109_200534995_200535172_200536064_200536143_200542578_200542665_200569662_200569893_200571049_200573978_200575310_200575462_200583448
H1_mix_00050462	chr2	+	3418	12	FSM	ENSG00000082153.18	ENST00000452790.6	1473	12	-345	-1600	88	605	multi-exon	FALSE	canonical	1	4	junction_1	644.519604559207	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATCAGTCTTTTTTTTT	-1	True	NA	6	True	AATAAA	-24	NA	200812010	200823843	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_200812494_200813207_200813282_200815340_200815518_200815666_200815762_200816324_200816391_200817105_200817242_200817973_200818084_200818222_200818394_200818754_200818902_200819981_200820121_200821182_200821306_200822146
H1_mix_00050464	chr2	+	1439	7	NIC	ENSG00000196290.17	novel	1689	7	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	3	47	junction_1	144.215887551345	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTTGGAAGGAGCTCA	-11	True	NA	22	True	AATAAA	-15	NA	200889359	200903925	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_200889392_200891917_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
H1_mix_00050465	chr2	+	1645	7	FSM	ENSG00000196290.17	ENST00000359683.8	1626	7	-19	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	136.854444169303	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAAGGAGCTCAAGTGA	-2	True	NA	27	True	AATAAA	-20	NA	200889368	200903930	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_200889653_200891968_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
H1_mix_00050466	chr2	+	3910	6	NIC	ENSG00000196290.17	novel	1679	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	344	junction_2	52.2432770794482	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTTGGAAGGAGCTCA	-14	True	NA	22	True	AATAAA	-15	NA	200889414	200903925	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
H1_mix_00050469	chr2	+	1793	7	NIC	ENSG00000196290.17	novel	1689	7	NA	NA	2	0	intron_retention	FALSE	canonical	3	14	junction_1	155.875395392887	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTTGGAAGGAGCTCA	20	False	NA	22	True	AATAAA	-15	NA	200889448	200903925	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_200889653_200891735_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
H1_mix_00050474	chr2	+	1826	3	FSM	ENSG00000119013.10	ENST00000682325.1	1548	3	-261	-17	-238	1	multi-exon	FALSE	canonical	3	165	junction_1	875	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTTTTGTCATTCTTAAA	-7	True	NA	30	True	ATTAAA	-19	NA	201071762	201085751	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_201073154_201078880_201079023_201085458
H1_mix_00050475	chr2	+	712	3	FSM	ENSG00000119013.10	ENST00000237889.9	493	3	-225	6	-225	0	multi-exon	FALSE	canonical	3	1477	junction_1	219	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAATCTGCTTTTGTCAT	6	True	NA	23	True	ATTAAA	-12	NA	201071775	201085744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_201072060_201078880_201079023_201085458
H1_mix_00050476	chr2	+	576	4	FSM	ENSG00000119013.10	ENST00000684175.1	555	4	-21	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	863.812608279262	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTTTTGTCATTCTTAA	-5	True	NA	29	True	ATTAAA	-18	NA	201072000	201085750	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_201072060_201073070_201073154_201078880_201079023_201085458
H1_mix_00050477	chr2	+	1027	3	FSM	ENSG00000119013.10	ENST00000684420.1	739	3	-289	1	-238	0	multi-exon	FALSE	canonical	3	113	junction_1	901	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAATCTGCTTTTGTCAT	-7	True	NA	23	True	ATTAAA	-12	NA	201071762	201085744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_201072362_201078880_201079023_201085458
H1_mix_00050482	chr2	+	2820	9	FSM	ENSG00000003402.21	ENST00000457277.5	1868	9	-538	-414	-1	0	multi-exon	FALSE	canonical	3	21	junction_8	38.5468464987734	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACCAAAAGGCTGGGCGT	-6	True	NA	NA	False	AAGAAA	-22	NA	201129327	201163973	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_201130147_201133028_201133135_201135971_201136108_201140356_201140440_201145377_201145433_201149002_201149053_201149753_201149836_201160431_201160943_201162995
H1_mix_00050483	chr2	+	1147	6	NIC	ENSG00000003402.21	novel	1198	5	NA	NA	12	-1	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	34.5913283931103	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCATTTGTTTTTTTAC	7	True	NA	20	True	AATAAA	-16	NA	201129340	201141597	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_201129521_201129728_201130147_201133028_201133135_201135971_201136108_201140356_201140440_201141373
H1_mix_00050484	chr2	+	1369	5	FSM	ENSG00000003402.21	ENST00000440180.5	1198	5	-175	4	-1	0	multi-exon	FALSE	canonical	3	49	junction_4	29.4703240565828	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATTTGTTTTTTTACT	-6	True	NA	21	True	AATAAA	-17	NA	201129327	201141598	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_201130147_201133028_201133135_201135971_201136108_201140356_201140440_201141373
H1_mix_00050489	chr2	+	2751	9	FSM	ENSG00000064012.23	ENST00000358485.8	2930	9	179	0	96	0	multi-exon	FALSE	canonical	3	7	junction_1	6.88748865697795	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTTGGAGATTTTTTGT	-5	True	NA	9	True	AATAAA	-19	NA	201258214	201287711	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_201258383_201266460_201266792_201271515_201271622_201272637_201272777_201272897_201272943_201274888_201274954_201276826_201276969_201284815_201285318_201286458
H1_mix_00050490	chr2	+	2228	12	FSM	ENSG00000082146.13	ENST00000194530.8	2222	12	-6	0	0	0	multi-exon	FALSE	canonical	3	332	junction_5	27.1831863444062	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATGCTTTTATTTATTT	-6	True	NA	27	True	AATAAA	-16	NA	201451733	201480846	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_201451939_201454745_201454853_201458783_201458865_201469952_201470053_201472954_201473077_201474646_201474756_201475618_201475743_201477618_201477791_201478086_201478192_201478356_201478602_201479488_201479532_201480031
H1_mix_00050491	chr2	+	2190	12	FSM	ENSG00000082146.13	ENST00000392249.6	2190	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_11	110.63191893664	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATGCTTTTATTTATTT	56	False	NA	27	True	AATAAA	-16	NA	201451795	201480846	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_201451939_201454745_201454853_201458783_201458865_201469952_201470053_201472954_201473077_201474646_201474756_201475618_201475743_201477618_201477791_201478086_201478192_201478356_201478602_201479488_201479532_201480007
H1_mix_00050496	chr2	+	1994	15	FSM	ENSG00000055044.11	ENST00000264279.10	1994	15	0	0	0	0	multi-exon	FALSE	canonical	3	1028	junction_3	123.226624640977	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAATTTTGTGATCTCTTT	12	True	NA	18	True	AATAAA	-19	NA	202265762	202303661	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_202265987_202275112_202275190_202277949_202278003_202282350_202282473_202284344_202284482_202287659_202287725_202290322_202290458_202291124_202291271_202292776_202292904_202295673_202295838_202297378_202297514_202297844_202297907_202300233_202300368_202302920_202303058_202303385
H1_mix_00050499	chr2	+	2058	4	FSM	ENSG00000055044.11	ENST00000478508.1	599	4	-905	-554	-905	326	multi-exon	FALSE	canonical	3	24	junction_1	670.847391157052	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTTTGCAATTCTAAAAG	1512	False	NA	NA	False	NA	NA	NA	202298952	202303987	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_202300138_202300233_202300368_202302920_202303058_202303385
H1_mix_00050506	chr2	+	5938	16	FSM	ENSG00000138380.18	ENST00000402905.7	5938	16	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_8	4.89716471258852	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTTGGCCAGAGATTTA	NA	False	NA	NA	False	AATAAA	-16	NA	202912213	202987063	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_202912325_202917876_202918044_202941859_202941981_202942739_202942968_202952558_202952680_202954004_202954135_202955673_202955759_202961236_202961427_202966977_202967099_202969918_202970063_202971504_202971739_202974333_202974497_202977268_202977333_202981554_202981686_202982071_202982442_202983505
H1_mix_00050507	chr2	+	2513	15	FSM	ENSG00000138380.18	ENST00000428585.5	2513	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	5.80640040940045	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATATTCAATTTTGGTTA	7	True	NA	NA	False	AATATA	-36	NA	202912282	202983935	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_202912325_202917876_202918044_202941859_202941981_202952558_202952680_202954004_202954135_202955673_202955759_202961236_202961427_202966977_202967099_202969918_202970063_202971504_202971739_202974333_202974497_202977268_202977333_202981554_202981686_202982071_202982442_202983505
H1_mix_00050520	chr2	+	1833	10	NNC	ENSG00000138443.17	novel	6484	10	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	32	junction_1	170.727275117761	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATCTTTCTGCCATCATT	-9	True	NA	-49	True	ATTAAA	-27	NA	203328281	203427528	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_203328632_203366880_203367045_203380207_203380385_203391045_203391144_203394699_203394847_203395655_203395781_203402575_203402735_203411284_203411372_203416907_203417082_203427176
H1_mix_00050522	chr2	+	2243	10	FSM	ENSG00000138443.17	ENST00000424558.5	2240	10	-3	0	0	0	multi-exon	FALSE	canonical	3	37	junction_6	200.966983345677	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGCATCCCTTCATGT	0	True	NA	NA	False	NA	NA	NA	203328391	203427948	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_203328632_203366876_203367045_203380207_203380385_203391045_203391144_203394699_203394847_203395655_203395781_203396784_203396968_203402575_203402735_203416907_203417082_203427176
H1_mix_00050523	chr2	+	1909	11	NIC	ENSG00000138443.17	novel	6567	12	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_6	191.457149252777	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATCTTTCTGCCATCATT	1	True	NA	-49	True	ATTAAA	-27	NA	203328392	203427528	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_203328632_203366876_203367045_203380207_203380385_203391045_203391144_203394699_203394847_203395655_203395781_203396784_203396968_203402575_203402735_203411284_203411372_203416907_203417082_203427176
H1_mix_00050524	chr2	+	1579	9	NIC	ENSG00000138443.17	novel	6484	10	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_4	186.963189893091	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATCTTTCTGCCATCATT	1	True	NA	-49	True	ATTAAA	-27	NA	203328392	203427528	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_203328632_203366876_203367045_203380207_203380385_203391045_203391144_203395655_203395781_203402575_203402735_203411284_203411372_203416907_203417082_203427176
H1_mix_00050525	chr2	+	1488	8	NNC	ENSG00000138443.17	novel	1676	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_4	225.873452018006	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATCTTTCTGCCATCATT	1	True	NA	-49	True	ATTAAA	-27	NA	203328392	203427528	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_203328632_203366880_203367045_203380207_203380385_203391045_203391144_203395655_203395781_203402575_203402735_203416907_203417082_203427176
H1_mix_00050526	chr2	+	1802	11	NIC	ENSG00000138443.17	novel	6484	10	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_2	199.125688950472	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATCTTTCTGCCATCATT	1	True	NA	-49	True	ATTAAA	-27	NA	203328392	203427528	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_203328632_203366876_203367045_203376056_203376133_203380207_203380385_203391045_203391144_203394699_203394847_203395655_203395781_203402575_203402735_203411284_203411372_203416907_203417082_203427176
H1_mix_00050527	chr2	+	6276	9	NNC	ENSG00000138443.17	novel	6567	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	177.901262994392	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGGTGTCTTGTTAACTT	1	True	NA	15	True	AATAAA	-16	NA	203328392	203432169	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_203328632_203366880_203367045_203380207_203380385_203391045_203391144_203394699_203394847_203395655_203395781_203402575_203402735_203416907_203417082_203427176
H1_mix_00050529	chr2	+	6224	10	NIC	ENSG00000138443.17	novel	6567	12	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_2	208.822861905302	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGGTGTCTTGTTAACTT	95	False	NA	15	True	AATAAA	-16	NA	203328524	203432169	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_203328632_203366876_203367045_203376056_203376133_203380207_203380385_203391045_203391144_203394699_203394847_203395655_203395781_203402575_203402735_203416907_203417082_203427176
H1_mix_00050530	chr2	+	1165	10	NNC	ENSG00000138443.17	novel	6484	10	NA	NA	50	0	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_9	163.138508144172	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATCTTTCTGCCATCATT	67	False	NA	-49	True	ATTAAA	-27	NA	203366972	203427528	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_203367045_203380207_203380385_203391045_203391144_203394699_203394847_203395655_203395781_203402575_203402735_203411284_203411372_203416907_203417082_203427176_203427270_203427495
H1_mix_00050533	chr2	+	6858	16	FSM	ENSG00000118257.17	ENST00000357118.8	3367	16	-933	-2558	-173	0	multi-exon	TRUE	canonical	3	15	junction_15	39.4472925419336	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGAGGTTTTTTTTCCC	20	False	NA	21	True	AATAAA	-22	NA	205682326	205779714	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_205683364_205697543_205697722_205716192_205716375_205722477_205722709_205723784_205723941_205725912_205726083_205727890_205728047_205740518_205740664_205743202_205743553_205745745_205745891_205749724_205749842_205752834_205752976_205763673_205763937_205765473_205765571_205766782_205766804_205776245
H1_mix_00050534	chr2	+	2574	10	FSM	ENSG00000118257.17	ENST00000417189.5	2386	10	-163	-25	-156	25	multi-exon	FALSE	canonical	2	20	junction_1	45.7742717103974	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTATTTCTGACTCTTTT	37	False	NA	37	True	AAAACA	-45	NA	205682343	205743723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_205682906_205683090_205683364_205697543_205697722_205716192_205716375_205722477_205722709_205723784_205723941_205725912_205726083_205727890_205728047_205740518_205740664_205743202
H1_mix_00050535	chr2	+	6645	17	FSM	ENSG00000118257.17	ENST00000357785.10	6644	17	-1	0	0	0	multi-exon	FALSE	canonical	3	98	junction_15	22.4185156455551	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTCTGCATCGTGGTT	0	True	NA	8	True	AATAAA	-15	NA	205682499	205798131	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_205683364_205697543_205697722_205716192_205716375_205722477_205722709_205723784_205723941_205725912_205726083_205727890_205728047_205740518_205740664_205743202_205743553_205745745_205745891_205749724_205749842_205752834_205752976_205763673_205763937_205765473_205765571_205766782_205766804_205792234_205792286_205794753
H1_mix_00050536	chr2	+	6816	17	FSM	ENSG00000118257.17	ENST00000360409.7	6662	17	-156	2	-156	0	multi-exon	FALSE	canonical	3	17	junction_15	38.6999677002449	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTCTGCATCGTGGTT	37	False	NA	8	True	AATAAA	-15	NA	205682343	205798131	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_205683364_205697543_205697722_205716192_205716375_205722477_205722709_205723784_205723941_205725912_205726083_205727890_205728047_205740518_205740664_205743202_205743553_205745745_205745891_205749724_205749842_205752834_205752976_205763673_205763937_205765473_205765571_205766782_205766819_205792234_205792286_205794753
H1_mix_00050540	chr2	+	1000	2	FSM	ENSG00000227946.2	ENST00000435627.1	482	2	182	-700	182	-1	multi-exon	FALSE	canonical	3	103	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATGATACAGTGTGTCAT	324	False	NA	8	True	AATAAA	-21	NA	206085703	206086856	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_206085804_206085956
H1_mix_00050542	chr2	+	854	7	FSM	ENSG00000114942.14	ENST00000236957.9	844	7	-11	1	-11	0	multi-exon	FALSE	canonical	3	827	junction_1	1129.30106211271	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGGCTCTTGAGTATG	NA	False	NA	33	True	AATAAA	-14	NA	206159573	206162927	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_206159685_206159958_206160060_206160587_206160711_206161345_206161473_206162037_206162105_206162488_206162615_206162728
H1_mix_00050543	chr2	+	1048	2	FSM	ENSG00000114942.14	ENST00000460760.1	1025	2	-23	0	0	0	multi-exon	FALSE	canonical	3	3914	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATGACAGTGTTTACCTG	-11	True	NA	NA	False	NA	NA	NA	206159614	206161190	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_206160060_206160587
H1_mix_00050544	chr2	+	933	8	FSM	ENSG00000114942.14	ENST00000429769.5	912	8	-21	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	1806.99778073794	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGATATGCTGGAGGAGC	-11	True	NA	-93	True	GATAAA	-6	NA	206159614	206162801	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_206159685_206159958_206160060_206160587_206160711_206160886_206161133_206161345_206161473_206162037_206162105_206162488_206162615_206162728
H1_mix_00050545	chr2	+	808	6	FSM	ENSG00000114942.14	ENST00000392222.7	808	6	0	0	0	0	multi-exon	FALSE	canonical	3	3535	junction_2	182.164101842267	1638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGGCTCTTGAGTATGT	-5	True	NA	34	True	AATAAA	-15	NA	206159894	206162928	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_206160060_206160587_206160711_206161345_206161473_206162037_206162105_206162488_206162615_206162728
H1_mix_00050548	chr2	+	10314	6	FSM	ENSG00000204186.10	ENST00000649650.1	10303	6	-11	0	-11	0	multi-exon	FALSE	canonical	3	5	junction_1	3.49857113690718	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGTTCTCTCTTCAT	-8	True	NA	18	True	ATTAAA	-9	NA	206274677	206314427	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_206274947_206279539_206279593_206280549_206280594_206281800_206281910_206297245_206297374_206304716
H1_mix_00050554	chr2	+	7650	9	FSM	ENSG00000118260.15	ENST00000432329.6	7650	9	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_4	57.4280800218848	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAAGTCTCTTTTTTGGGG	152	False	NA	21	True	CATAAA	-18	NA	207529891	207603431	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_207530135_207555627_207555750_207560225_207560373_207561118_207561161_207567462_207567564_207570178_207570322_207575271_207575455_207577504_207577656_207596913
H1_mix_00050555	chr2	+	10095	8	FSM	ENSG00000118260.15	ENST00000353267.8	10095	8	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_3	37.3188139890729	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCATAAGGCTTTCCTTT	10	True	NA	NA	False	ATTAAA	-18	NA	207529961	207605988	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_207530135_207555627_207555750_207560225_207560373_207567462_207567564_207570178_207570322_207575271_207575455_207577504_207577656_207596913
H1_mix_00050556	chr2	+	5973	10	NIC	ENSG00000118260.15	novel	7650	9	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_9	70.089537092754	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAAGTCTCTTTTTTGGGG	21	False	NA	21	True	CATAAA	-18	NA	207529972	207603431	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_207530135_207555627_207555750_207560225_207560373_207561118_207561161_207567462_207567564_207570178_207570322_207575271_207575455_207577504_207577656_207596913_207597484_207599079
H1_mix_00050560	chr2	+	606	1	Genic_Genomic	ENSG00000163249.13	novel	NA	NA	NA	NA	5252	368	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTCAGACAAACAGGAAAG	901	False	NA	NA	False	ATTAAA	-37	NA	207755936	207756542	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr2_+_207755900_207756500
H1_mix_00050567	chr2	+	2791	3	NNC	ENSG00000289113.1	novel	685	2	NA	NA	142	21033	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_2	1.5	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATGGGAAGAAGTAAGTG	142	False	NA	10	True	AATAAA	-22	NA	209299831	209325929	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_209299939_209321641_209321796_209323399
H1_mix_00050570	chr2	+	565	3	NNC	ENSG00000289113.1	novel	685	2	NA	NA	1	6148	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_2	2.5	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGGTACTTTGTTACGG	1	True	NA	24	True	AATAAA	-24	NA	209299690	209311044	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_209299939_209305114_209305260_209310872
H1_mix_00050571	chr2	+	2065	14	NIC	ENSG00000078018.21	novel	2241	15	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	3.65040323621682	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTAGTAATTGTTACAATT	-18	True	NA	NA	False	AATAAA	-17	NA	209424062	209730518	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_209424277_209507591_209507642_209580035_209580101_209625052_209625130_209653141_209653433_209678571_209678686_209680749_209680828_209700276_209700339_209705579_209705728_209709913_209710255_209723594_209723688_209725708_209725791_209729849_209729963_209730181
H1_mix_00050572	chr2	+	798	2	FSM	ENSG00000078018.21	ENST00000478233.1	814	2	0	16	0	-16	multi-exon	FALSE	canonical	3	28	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTCTGATATAAAATTGA	5292	False	NA	NA	False	ATTAAA	-5	NA	209705579	209710563	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_209705728_209709913
H1_mix_00050574	chr2	+	3292	7	FSM	ENSG00000197713.15	ENST00000436630.6	1128	7	-4	-2160	-4	0	multi-exon	FALSE	canonical	3	102	junction_3	227.327712540484	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATGAATTTCTGTAAATA	NA	False	NA	12	True	AATAAA	-21	NA	210002579	210022260	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_210002784_210009656_210009737_210015972_210016113_210016203_210016258_210016506_210016642_210017472_210017560_210019668
H1_mix_00050576	chr2	+	815	5	FSM	ENSG00000197713.15	ENST00000438204.6	796	5	-19	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	234.523319736013	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATAACTACATTTTTA	-8	True	NA	38	True	ATTAAA	-39	NA	210002623	210019961	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_210002784_210015972_210016113_210016506_210016642_210017472_210017560_210019668
H1_mix_00050577	chr2	+	3194	6	FSM	ENSG00000197713.15	ENST00000359429.11	3180	6	-14	0	0	0	multi-exon	FALSE	canonical	3	506	junction_1	50.127836578093	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATGAATTTCTGTAAATA	-8	True	NA	12	True	AATAAA	-21	NA	210002623	210022260	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_210002784_210009656_210009737_210015972_210016113_210016506_210016642_210017472_210017560_210019668
H1_mix_00050578	chr2	+	865	6	FSM	ENSG00000197713.15	ENST00000435437.2	858	6	-7	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	233.801967485306	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATAACTACATTTTTA	18	False	NA	38	True	ATTAAA	-39	NA	210002649	210019961	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_210002784_210009656_210009737_210015972_210016113_210016506_210016642_210017472_210017560_210019672
H1_mix_00050581	chr2	+	5791	40	FSM	ENSG00000021826.18	ENST00000673630.1	5775	40	-16	0	-16	0	multi-exon	TRUE	canonical	2	13	junction_2	8.52084885561584	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGAACTATGGGGTCCCA	15	False	NA	NA	False	NA	NA	NA	210477665	210678923	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_210477767_210519550_210519785_210556718_210556860_210573297_210573408_210576345_210576491_210577420_210577511_210579713_210579771_210582616_210582710_210588057_210588148_210590105_210590235_210590799_210590907_210591830_210591970_210592878_210592957_210594507_210594607_210595486_210595583_210599371_210599562_210600554_210600713_210602201_210602331_210605101_210605247_210606730_210606942_210608360_210608560_210612116_210612294_210616422_210616542_210637701_210637844_210639149_210639216_210639995_210640060_210642483_210642666_210647862_210648058_210648472_210648541_210650362_210650439_210654024_210654103_210656524_210656633_210658598_210658689_210660484_210660656_210663122_210663198_210668185_210668285_210674901_210674962_210675727_210675841_210677006_210677137_210677886
H1_mix_00050589	chr2	+	2040	16	FSM	ENSG00000138363.15	ENST00000236959.14	1972	16	-99	31	4	0	multi-exon	FALSE	canonical	3	753	junction_10	57.6537557801359	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAAACAGTATCTCT	NA	False	NA	-3	True	NA	NA	NA	215311959	215349733	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_215312162_215312497_215312625_215318156_215318234_215319664_215319732_215325240_215325330_215325986_215326139_215326821_215326979_215332381_215332508_215333349_215333458_215334918_215335005_215336034_215336125_215338778_215338908_215344778_215344872_215346758_215346942_215349093_215349250_215349535
H1_mix_00050590	chr2	+	2309	16	FSM	ENSG00000138363.15	ENST00000443953.5	2187	16	-112	-10	4	0	multi-exon	FALSE	canonical	3	64	junction_1	199.520246814425	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTAGTTGTGTTTTATG	NA	False	NA	37	True	AATAAA	-32	NA	215311959	215349773	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_215312391_215312497_215312625_215318156_215318234_215319664_215319732_215325240_215325330_215325986_215326139_215326821_215326979_215332381_215332508_215333349_215333458_215334918_215335005_215336034_215336125_215338778_215338908_215344778_215344872_215346758_215346942_215349093_215349250_215349535
H1_mix_00050591	chr2	+	2275	15	FSM	ENSG00000138363.15	ENST00000435675.5	2275	15	0	0	0	0	multi-exon	FALSE	canonical	3	753	junction_9	59.4534631936129	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATAGTTTTTGGTAGTT	3	True	NA	27	True	AATAAA	-22	NA	215312090	215349763	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_215312625_215318156_215318234_215319664_215319732_215325240_215325330_215325986_215326139_215326821_215326979_215332381_215332508_215333349_215333458_215334918_215335005_215336034_215336125_215338778_215338908_215344778_215344872_215346758_215346942_215349093_215349250_215349535
H1_mix_00050601	chr2	+	3128	18	NIC	ENSG00000138375.13	novel	3201	18	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	40.2780990057323	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAATTGAAATAAAATAAT	-19	True	NA	8	True	AATAAA	-17	NA	216412475	216483017	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_216412604_216413855_216413893_216414646_216415516_216416256_216416308_216420298_216420533_216423632_216423684_216428595_216428783_216432717_216432869_216435337_216435497_216438419_216438486_216447017_216447159_216450845_216451065_216464596_216464668_216467943_216468047_216475268_216475452_216477108_216477210_216478202_216478300_216482737
H1_mix_00050603	chr2	+	3335	18	FSM	ENSG00000138375.13	ENST00000358207.9	3056	18	-279	0	-20	0	multi-exon	FALSE	canonical	0	0	junction_5	38.2326695931824	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAATTGAAATAAAATAAT	-31	True	NA	8	True	AATAAA	-17	NA	216412463	216483017	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_216412799_216413855_216413893_216414646_216415516_216416256_216416308_216420298_216420533_216423632_216423684_216428595_216428783_216432717_216432869_216435337_216435497_216438419_216438486_216447017_216447159_216450845_216451065_216464596_216464668_216467943_216468047_216475268_216475452_216477108_216477210_216478202_216478300_216482737
H1_mix_00050605	chr2	+	595	4	FSM	ENSG00000197756.10	ENST00000446558.5	495	4	-95	-5	-65	5	multi-exon	FALSE	canonical	1	2	junction_3	5383.3358513926	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTACTCCTATACTTAAT	820	False	NA	13	True	AATATA	-26	NA	216498759	216579185	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_216498878_216499269_216499399_216499948_216500032_216578920
H1_mix_00050607	chr2	+	759	3	FSM	ENSG00000197756.10	ENST00000359681.3	742	3	-17	0	0	0	multi-exon	FALSE	canonical	3	12844	junction_1	66	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTGGCTTGTTAACTT	6	True	NA	17	True	AATAAA	-23	NA	216498849	216501467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_216499399_216499948_216500032_216501340
H1_mix_00050608	chr2	+	559	1	FSM	ENSG00000197756.10	ENST00000624436.1	559	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTGCTTTGGTGTTTGG	NA	False	NA	29	True	AATAAA	-19	NA	216529024	216529583	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_216529000_216529600
H1_mix_00050612	chr2	+	1055	5	FSM	ENSG00000163466.16	ENST00000489598.5	1039	5	-16	0	-10	0	multi-exon	TRUE	canonical	3	2728	junction_1	201.763475386404	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATTGGAACATAATATTT	NA	False	NA	NA	False	NA	NA	NA	218217130	218235052	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_218217255_218217462_218217545_218225919_218225955_218228737_218228851_218234351
H1_mix_00050613	chr2	+	816	5	FSM	ENSG00000163466.16	ENST00000465395.5	816	5	0	0	0	0	multi-exon	FALSE	canonical	3	2971	junction_2	119.470707706952	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTGCCTCTCTTAGG	116	False	NA	NA	False	AATAAA	-20	NA	218217454	218239195	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_218217545_218225919_218225955_218228737_218228851_218234351_218234398_218238663
H1_mix_00050614	chr2	+	524	6	FSM	ENSG00000163466.16	ENST00000480062.5	508	6	-16	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	1468.98558195784	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATCAAGCTGGCATGTTG	11	True	NA	NA	False	NA	NA	NA	218217180	218238723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_218217255_218225919_218225955_218228737_218228851_218234351_218234398_218234848_218235045_218238663
H1_mix_00050616	chr2	+	1426	11	FSM	ENSG00000163466.16	ENST00000315717.10	1410	11	-8	-8	0	0	multi-exon	FALSE	canonical	3	2728	junction_1	276.943116903093	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGGGTTTCTGGACTG	11	True	NA	38	True	AATAAA	-27	NA	218217180	218254356	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_218217255_218217462_218217545_218225919_218225955_218228737_218228851_218234351_218234398_218238663_218238851_218239390_218239485_218245419_218245547_218249363_218249465_218249820_218249922_218253890
H1_mix_00050617	chr2	+	1605	10	FSM	ENSG00000163466.16	ENST00000295685.14	1605	10	0	0	0	0	multi-exon	FALSE	canonical	3	2964	junction_9	229.324989081617	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGGGTTTCTGGACTG	40	False	NA	38	True	AATAAA	-27	NA	218217209	218254356	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_218217545_218225919_218225955_218228737_218228851_218234351_218234398_218238663_218238851_218239390_218239485_218245419_218245547_218249363_218249465_218249820_218249922_218253890
H1_mix_00050619	chr2	+	2239	7	FSM	ENSG00000163466.16	ENST00000470146.5	2226	7	-13	0	-13	0	multi-exon	FALSE	canonical	3	2964	junction_6	227.252001580233	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	4171	False	NA	40	True	NA	NA	NA	218232986	218254108	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_218234398_218238663_218238851_218239390_218239485_218245419_218245547_218249363_218249465_218249820_218249922_218253890
H1_mix_00050624	chr2	+	3085	7	NIC	ENSG00000144579.8	novel	2525	7	NA	NA	331	0	combination_of_known_junctions	TRUE	canonical	3	16	junction_1	12.5521135891752	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTTCTGTGGTTATTG	550	False	NA	29	True	ACTAAA	-19	NA	218399304	218405941	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_218400158_218401563_218401713_218402113_218402216_218402348_218402406_218403034_218403128_218403231_218403418_218404296
H1_mix_00050627	chr2	+	601	5	FSM	ENSG00000144580.14	ENST00000432877.5	581	5	-20	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	209.333913879237	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGCACACTGTCAGCAAAA	9	True	NA	NA	False	NA	NA	NA	218568838	218584656	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_218568979_218580560_218580741_218580994_218581115_218582970_218583087_218584611
H1_mix_00050629	chr2	+	1126	8	FSM	ENSG00000144580.14	ENST00000295701.9	1126	8	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_7	113.677129608019	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAGTAAACTATTGAACC	-1	True	NA	3	True	AATAAA	-18	NA	218568874	218593842	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_218568979_218580560_218580741_218582970_218583087_218584611_218584722_218587585_218587696_218592303_218592403_218592615_218592708_218593527
H1_mix_00050631	chr2	+	647	2	FSM	ENSG00000074582.15	ENST00000490188.1	647	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGACTGCAGCCAATGGA	NA	False	NA	NA	False	NA	NA	NA	218659658	218660598	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_218659744_218660036
H1_mix_00050638	chr2	+	1453	8	FSM	ENSG00000074582.15	ENST00000412366.5	1430	8	-23	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	57.7680089421719	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTCTCTCATCTCCCT	5	True	NA	15	True	AATAAA	-15	NA	218659713	218663443	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_218659801_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
H1_mix_00050642	chr2	+	4885	27	FSM	ENSG00000163482.12	ENST00000295709.8	4873	27	-12	0	3	0	multi-exon	FALSE	canonical	3	70	junction_1	22.5049961579869	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTGGTCTGGCAGCTTA	14	True	NA	10	True	NA	NA	NA	218672073	218702715	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_218672216_218672740_218672914_218673624_218673766_218673878_218673957_218675342_218675474_218676028_218676279_218679167_218679262_218679559_218679730_218679892_218680081_218680602_218680703_218685084_218685229_218688696_218688877_218689858_218689957_218690449_218690556_218692142_218692294_218692582_218692711_218693239_218693345_218693722_218693822_218693894_218693984_218694263_218694328_218694524_218694636_218696526_218696602_218697038_218697214_218697462_218697611_218697853_218698002_218698601_218699349_218701865
H1_mix_00050643	chr2	+	4721	27	FSM	ENSG00000163482.12	ENST00000440309.5	4721	27	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	24.2130887876589	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTGAAGCTCCCAGGAC	-21	True	NA	21	True	AATAAA	-15	NA	218672295	218702623	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_218672366_218672740_218672914_218673624_218673766_218673878_218673957_218675342_218675474_218676028_218676279_218679167_218679262_218679559_218679730_218679892_218680081_218680602_218680703_218685084_218685229_218688696_218688877_218689858_218689957_218690449_218690556_218692142_218692294_218692582_218692711_218693239_218693345_218693722_218693822_218693894_218693984_218694263_218694328_218694524_218694636_218696526_218696602_218697038_218697214_218697462_218697611_218697853_218698002_218698601_218699349_218701865
H1_mix_00050645	chr2	+	2093	6	FSM	ENSG00000163482.12	ENST00000419433.1	2093	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	60.6478359053314	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGTCTGGCAGCTTAT	3183	False	NA	11	True	NA	NA	NA	218696528	218702716	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_218696602_218697038_218697214_218697462_218697611_218697902_218698002_218698601_218699349_218701865
H1_mix_00050651	chr2	+	601	5	FSM	ENSG00000135912.11	ENST00000417855.1	601	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	130.484673429487	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGCATGGGCATCAGCTA	2493	False	NA	NA	False	NA	NA	NA	218751753	218754416	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_218751807_218752762_218752974_218753120_218753186_218753583_218753670_218754230
H1_mix_00050655	chr2	+	4556	9	FSM	ENSG00000144567.11	ENST00000430297.7	4556	9	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_3	14.0690262633915	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGTGATAATTCTAGTG	-3	True	NA	15	True	AATAAA	-20	NA	219178274	219185475	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219178634_219178921_219179029_219179732_219179764_219180109_219180246_219180669_219180755_219181061_219181206_219181368_219181464_219181639_219181776_219182012
H1_mix_00050659	chr2	+	1833	7	FSM	ENSG00000158552.13	ENST00000409217.5	886	7	-37	-910	-4	0	multi-exon	FALSE	canonical	3	152	junction_3	11.066716867356	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGCCTGGAAAAAATAAAGGA	-14	True	NA	NA	False	NA	NA	NA	219206777	219209606	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219207043_219207326_219207422_219207647_219207780_219207886_219208039_219208255_219208349_219208425_219208487_219208571
H1_mix_00050660	chr2	+	1323	9	FSM	ENSG00000158552.13	ENST00000289528.10	1322	9	-4	3	-4	-2	multi-exon	FALSE	canonical	3	128	junction_8	18.8348082018374	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAAGTGGTGTGTTTCTC	-14	True	NA	NA	False	AATAAA	-23	NA	219206777	219209645	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219207043_219207326_219207422_219207647_219207780_219207886_219208039_219208255_219208349_219208425_219208487_219208571_219208640_219208976_219209050_219209261
H1_mix_00050661	chr2	+	2042	5	FSM	ENSG00000158552.13	ENST00000409594.5	2021	5	-21	0	-10	0	multi-exon	FALSE	canonical	3	152	junction_3	12.1732288239399	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGTGGTGTGTTTCTCTC	-20	True	NA	NA	False	AATAAA	-25	NA	219206771	219209647	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219207043_219207326_219207422_219207647_219207780_219207886_219208039_219208255
H1_mix_00050665	chr2	+	2961	13	FSM	ENSG00000163516.14	ENST00000477479.5	2940	13	-21	0	0	0	multi-exon	TRUE	canonical	1	31	junction_2	88.5219683970532	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAATTTTAATCACAATAAA	-29	True	NA	5	True	NA	NA	NA	219229805	219236618	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219229901_219230227_219230351_219231927_219232041_219232259_219232363_219232489_219232684_219233078_219233192_219233285_219233434_219233714_219233944_219234132_219235313_219235473_219235586_219235707_219235876_219236009_219236096_219236321
H1_mix_00050666	chr2	+	3256	11	FSM	ENSG00000163516.14	ENST00000463792.5	3245	11	-11	0	0	0	multi-exon	FALSE	canonical	1	31	junction_2	95.8121077943701	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTACTTGTACTTACATT	-8	True	NA	38	True	AATAAA	-14	NA	219229826	219236651	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219229901_219230227_219230351_219231927_219232041_219232259_219232363_219232489_219232684_219233078_219233192_219233285_219233434_219233714_219233944_219234132_219235876_219236009_219236096_219236321
H1_mix_00050667	chr2	+	2479	14	FSM	ENSG00000163516.14	ENST00000323348.10	2540	14	0	61	0	0	multi-exon	FALSE	canonical	1	67	junction_5	65.1009230158436	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAATTTTAATCACAATAAA	-29	True	NA	5	True	NA	NA	NA	219229805	219236618	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219229901_219230227_219230406_219231927_219232041_219232259_219232363_219232489_219232684_219233078_219233192_219233285_219233434_219233714_219233944_219234132_219234289_219234825_219235313_219235473_219235586_219235707_219235876_219236009_219236096_219236321
H1_mix_00050678	chr2	+	2231	9	FSM	ENSG00000175084.13	ENST00000373960.4	2243	9	12	0	12	0	multi-exon	FALSE	canonical	2	4	junction_4	2.75850956133924	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAAGCTGGCCCCTGTTGT	11	False	NA	3	True	AATAAA	-16	NA	219418388	219426734	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219419041_219420094_219420156_219420250_219420347_219420494_219420657_219420827_219420954_219421339_219421561_219423776_219423821_219425662_219425746_219425948
H1_mix_00050684	chr2	+	5132	9	FSM	ENSG00000072195.15	ENST00000464989.5	5132	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	21.9427522202663	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGGTGTGTTGTGTTTTT	1629	False	NA	11	True	AATAAA	-16	NA	219443673	219466861	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219444060_219444652_219444743_219444824_219445162_219447973_219449272_219451135_219451280_219451624_219451808_219461881_219462058_219462297_219462387_219464432
H1_mix_00050686	chr2	+	1545	5	FSM	ENSG00000072195.15	ENST00000396688.5	1457	5	-68	-20	-68	0	multi-exon	FALSE	canonical	3	5	junction_1	35.7980446393375	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGGTGTGTTGTGTTTTT	-3	True	NA	11	True	AATAAA	-16	NA	219460697	219466861	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219460997_219461881_219462058_219462297_219462387_219464432_219464609_219466056
H1_mix_00050688	chr2	+	1654	12	FSM	ENSG00000144591.20	ENST00000373917.7	1630	12	-24	0	-1	0	multi-exon	FALSE	canonical	3	135	junction_1	53.2821896653768	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTCCTGGGTTTTCTCCC	-25	True	NA	-37	True	NA	NA	NA	219498863	219506935	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219498939_219499955_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505762_219505979_219506073_219506253_219506423_219506697
H1_mix_00050689	chr2	+	1816	12	FSM	ENSG00000144591.20	ENST00000683241.1	1814	12	-2	0	-2	0	multi-exon	TRUE	canonical	3	23	junction_8	93.2026140874132	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAATAAACCCCGTGAACC	-26	True	NA	-8	True	NA	NA	NA	219498862	219506964	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219498939_219499955_219500016_219500120_219500219_219501475_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505694_219505762_219505979_219506073_219506253_219506423_219506697
H1_mix_00050690	chr2	+	2485	13	FSM	ENSG00000144591.20	ENST00000683598.1	2475	13	-10	0	3	0	multi-exon	FALSE	canonical	0	0	junction_7	105.168482551676	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCGTGAACCTTGGAGCCA	-11	True	NA	1	True	AATAAA	-1	NA	219498877	219506973	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219499255_219499960_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504869_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
H1_mix_00050692	chr2	+	2176	13	FSM	ENSG00000144591.20	ENST00000682058.1	2189	13	13	0	3	0	multi-exon	FALSE	canonical	0	0	junction_7	102.852510367462	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTGGAGCCAGCACAGA	-11	True	NA	8	True	AATAAA	-8	NA	219498877	219506980	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219498939_219499960_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504869_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
H1_mix_00050693	chr2	+	1900	13	FSM	ENSG00000144591.20	ENST00000358215.8	1823	13	-38	-39	-2	39	multi-exon	FALSE	canonical	3	59	junction_1	70.590515179685	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCGGAAGCGGGGCAGCTGA	-26	True	NA	56	True	NA	NA	NA	219498862	219507028	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219499255_219499960_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
H1_mix_00050694	chr2	+	1535	13	FSM	ENSG00000144591.20	ENST00000313597.10	1522	13	-13	0	3	0	multi-exon	FALSE	canonical	3	135	junction_1	51.0170859179114	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGCACAGACTGTACTTA	-11	True	NA	17	True	AATAAA	-17	NA	219498877	219506989	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219498939_219499955_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
H1_mix_00050696	chr2	+	1816	13	FSM	ENSG00000144591.20	ENST00000622191.2	1797	13	-19	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	80.3817281614561	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAATAAACCCCGTGAACC	-1	True	NA	-8	True	NA	NA	NA	219498887	219506964	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219499255_219499955_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
H1_mix_00050697	chr2	+	1519	13	FSM	ENSG00000144591.20	ENST00000373908.5	1501	13	-18	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	66.6583328124349	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAGCACAGACTGTACTT	-1	True	NA	16	True	AATAAA	-16	NA	219498887	219506988	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219498939_219499960_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
H1_mix_00050698	chr2	+	1747	13	NIC	ENSG00000144591.20	novel	1823	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_4	103.462956333817	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCCAGCACAGACTGTACT	25	True	NA	15	True	AATAAA	-15	NA	219498913	219506987	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_219499255_219499960_219500016_219500120_219500219_219501475_219501580_219501911_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
H1_mix_00050699	chr2	+	1663	12	NIC	ENSG00000144591.20	novel	1823	13	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_7	107.698308342493	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGCACAGACTGTACTTA	37	False	NA	17	True	AATAAA	-17	NA	219498925	219506989	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_219499255_219499960_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
H1_mix_00050706	chr2	+	4154	23	FSM	ENSG00000114923.17	ENST00000358055.8	4151	23	-3	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	13.2593332168466	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTCACTTTCTTGGTT	-8	True	NA	24	True	NA	NA	NA	219627626	219641971	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219627746_219627899_219628044_219628404_219628571_219629143_219629422_219629579_219629696_219630152_219630353_219631967_219632117_219632261_219632443_219632873_219633010_219633273_219633458_219633879_219633980_219634419_219634605_219635270_219635497_219635672_219635892_219636301_219636451_219636679_219636875_219637580_219637812_219638163_219638254_219638702_219638870_219639481_219639736_219640429_219640600_219640788_219640963_219641650
H1_mix_00050707	chr2	+	4069	23	FSM	ENSG00000114923.17	ENST00000317151.7	4069	23	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	13.2593332168466	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTTGGTTTCATCTTTG	0	True	NA	33	True	NA	NA	NA	219627660	219641980	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219627746_219627959_219628044_219628404_219628571_219629143_219629422_219629579_219629696_219630152_219630353_219631967_219632117_219632261_219632443_219632873_219633010_219633273_219633458_219633879_219633980_219634419_219634605_219635270_219635497_219635672_219635892_219636301_219636451_219636679_219636875_219637580_219637812_219638163_219638254_219638702_219638870_219639481_219639736_219640429_219640600_219640788_219640963_219641650
H1_mix_00050714	chr2	+	5549	16	FSM	ENSG00000123983.15	ENST00000680525.1	5545	16	-4	0	-4	0	multi-exon	FALSE	canonical	2	35	junction_11	119.628573324083	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATAAAAGTTGAAGTTTC	-3	True	NA	NA	False	AATAAA	-3	NA	222860979	222944609	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_222861259_222887829_222887889_222908732_222909151_222916318_222916497_222918045_222918156_222919063_222919203_222921279_222921431_222922707_222922832_222923077_222923150_222924455_222924596_222927016_222927243_222928861_222928937_222930620_222930813_222933165_222933281_222934529_222934688_222941496
H1_mix_00050716	chr2	+	5502	16	FSM	ENSG00000123983.15	ENST00000679545.1	5468	16	-4	-30	-4	0	multi-exon	FALSE	canonical	2	9	junction_4	125.819376709454	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTTAATATATTGGCTTT	-3	True	NA	NA	False	AATAAA	-33	NA	222860979	222944639	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_222861259_222887829_222887889_222908732_222909151_222916318_222916497_222918069_222918156_222919063_222919203_222921279_222921431_222922707_222922832_222923077_222923150_222924455_222924596_222927016_222927190_222928861_222928937_222930620_222930813_222933165_222933281_222934529_222934688_222941496
H1_mix_00050717	chr2	+	5577	17	FSM	ENSG00000123983.15	ENST00000357430.8	5577	17	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	147.547820637921	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTTAATATATTGGCTTT	9	True	NA	NA	False	AATAAA	-33	NA	222861035	222944639	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_222861259_222887829_222887889_222900673_222900781_222908732_222909151_222916318_222916497_222918045_222918156_222919063_222919203_222921279_222921431_222922707_222922832_222923077_222923150_222924455_222924596_222927016_222927190_222928861_222928937_222930620_222930813_222933165_222933281_222934529_222934688_222941496
H1_mix_00050719	chr2	+	301	2	Intergenic	novelGene_767	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCCACCTGCCCAGCAAT	4238	False	NA	NA	False	NA	NA	NA	224225732	224227093	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_224225877_224226936
H1_mix_00050720	chr2	+	5480	7	FSM	ENSG00000144468.17	ENST00000341329.7	4883	7	-602	5	-247	0	multi-exon	FALSE	canonical	3	48	junction_1	30.7878042232454	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGCTCATTTATACTGT	NA	False	NA	NA	False	AATAAA	-23	NA	226835333	226999210	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_226836088_226864603_226865127_226867185_226867319_226906792_226906882_226908821_226908879_226914207_226914352_226995430
H1_mix_00050721	chr2	+	5781	9	FSM	ENSG00000144468.17	ENST00000392062.7	5061	9	-720	0	-247	0	multi-exon	FALSE	canonical	3	7	junction_1	51.3681564785033	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGCTCATTTATACTGT	NA	False	NA	NA	False	AATAAA	-23	NA	226835333	226999210	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_226836088_226838072_226838155_226839408_226839628_226864603_226865127_226867185_226867319_226906792_226906882_226908821_226908879_226914207_226914352_226995430
H1_mix_00050722	chr2	+	9645	8	NIC	ENSG00000144468.17	novel	5061	9	NA	NA	-2442	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	47.7454987727767	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGCTCATTTATACTGT	NA	False	NA	NA	False	AATAAA	-23	NA	226833138	226999210	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_226837839_226839408_226839628_226864603_226865127_226867185_226867319_226906792_226906882_226908821_226908879_226914207_226914352_226995430
H1_mix_00050726	chr2	+	1557	6	FSM	ENSG00000168958.20	ENST00000409565.5	1548	6	-9	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	204.963021055019	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTAGTGTATTTAATAAAC	-17	True	NA	-11	True	TTTAAA	-22	NA	227325249	227357799	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_227325428_227330625_227330847_227332418_227332589_227340291_227340381_227355676_227355762_227356985
H1_mix_00050727	chr2	+	1778	8	FSM	ENSG00000168958.20	ENST00000337110.11	1760	8	-18	0	0	0	multi-exon	FALSE	canonical	3	35	junction_6	218.840730455102	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGTCTGTTGAAGGAT	-17	True	NA	23	True	AATAAA	-16	NA	227325249	227357833	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_227325428_227328677_227328790_227330625_227330847_227332418_227332589_227340291_227340381_227342744_227342820_227355676_227355762_227356985
H1_mix_00050728	chr2	+	1922	9	FSM	ENSG00000168958.20	ENST00000304593.14	1921	9	-1	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	226.539973018008	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGTCTGTTGAAGGAT	-17	True	NA	23	True	AATAAA	-16	NA	227325249	227357833	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_227325428_227328677_227328790_227330625_227330847_227332418_227332589_227340291_227340381_227347225_227347385_227352513_227352574_227355676_227355762_227356985
H1_mix_00050729	chr2	+	3539	6	FSM	ENSG00000168958.20	ENST00000460756.5	3524	6	-15	0	0	0	multi-exon	FALSE	canonical	3	450	junction_2	73.5581402701292	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGTCTGTTGAAGGAT	-17	True	NA	23	True	AATAAA	-16	NA	227325249	227357833	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_227325428_227328677_227330847_227332418_227332589_227340291_227340381_227355676_227355762_227356985
H1_mix_00050730	chr2	+	1716	8	FSM	ENSG00000168958.20	ENST00000349901.11	1716	8	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_5	194.821425297892	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAACTGTCAACCAAAGA	9	True	NA	2	True	TTTAAA	-35	NA	227325275	227357812	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_227325428_227328677_227328790_227330625_227330847_227332418_227332589_227340291_227340381_227352513_227352574_227355676_227355762_227356985
H1_mix_00050731	chr2	+	1824	3	FSM	ENSG00000168958.20	ENST00000476262.1	1824	3	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	234	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATTTGTCTGTTGAAGG	NA	False	NA	21	True	AATAAA	-14	NA	227351680	227357831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_227352574_227355676_227355762_227356985
H1_mix_00050735	chr2	+	2825	4	FSM	ENSG00000153832.12	ENST00000283946.8	2813	4	-12	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	77.0757203447796	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTGAGTGCCTTATTAC	0	True	NA	NA	False	ATTAAA	-26	NA	229922490	230013119	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_229922610_229976240_229976350_229996750_229996924_230010695
H1_mix_00050742	chr2	+	1895	5	FSM	ENSG00000135916.16	ENST00000335005.10	1889	5	-6	0	0	0	multi-exon	FALSE	canonical	3	688	junction_1	1324.88122109116	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGACTTGAGTGTGGCT	-10	True	NA	15	True	AATAAA	-16	NA	230864941	230879247	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_230865146_230875619_230875809_230876856_230876968_230877399_230877551_230878007
H1_mix_00050750	chr2	+	4137	20	FSM	ENSG00000173692.14	ENST00000676739.1	4140	20	3	0	3	0	multi-exon	FALSE	canonical	3	1330	junction_11	97.811764498133	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAAAACTCCGTCTCAAAA	NA	False	NA	NA	False	NA	NA	NA	231056851	231163084	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231153563_231153667_231161339
H1_mix_00050753	chr2	+	3601	25	FSM	ENSG00000173692.14	ENST00000677158.1	3805	25	123	81	123	-81	multi-exon	FALSE	canonical	1	1	junction_1	303.494025087627	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAGACCCCCATCTCTAC	403	False	NA	NA	False	NA	NA	NA	231057295	231173035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231057541_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231153563_231153667_231161339_231161510_231163634_231163728_231165199_231165287_231165870_231166018_231170565_231170722_231172534
H1_mix_00050760	chr2	+	7902	25	FSM	ENSG00000135931.19	ENST00000611582.5	7879	25	-23	0	14	0	multi-exon	FALSE	canonical	3	13	junction_24	90.2368700051887	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTTGTACTCTGTCCC	-51	True	NA	5	True	NA	NA	NA	231198607	231376848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231198699_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231331792_231331898_231344974_231345091_231355797_231355935_231360753_231360884_231369952_231370126_231371512
H1_mix_00050761	chr2	+	2422	21	FSM	ENSG00000135931.19	ENST00000682367.1	2404	21	-18	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	77.9867136119993	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATTCATTTTGAAAAGC	-16	True	NA	-2	True	TTTAAA	-11	NA	231198642	231345181	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231198942_231206197_231206290_231208126_231208253_231214833_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231331792_231331898_231344974
H1_mix_00050763	chr2	+	2412	21	FSM	ENSG00000135931.19	ENST00000684718.1	2397	21	-15	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	57.802681598694	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATTCATTTTGAAAAGCA	2	True	NA	-1	True	TTTAAA	-12	NA	231198660	231345182	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231198946_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231331792_231331898_231344974
H1_mix_00050765	chr2	+	2289	20	NIC	ENSG00000135931.19	novel	3860	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	72.9018617076629	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATCTCTTTATTTTTGGG	46	True	NA	19	True	AATAAA	-20	NA	231198704	231345202	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_231198946_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231331792_231331898_231344974
H1_mix_00050767	chr2	+	2188	19	NIC	ENSG00000135931.19	novel	2333	21	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_9	81.5967198566096	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTATCTCTTTATTTTT	23	False	NA	16	True	AATAAA	-17	NA	231198754	231345199	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_231198946_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231331792_231331898_231344974
H1_mix_00050774	chr2	+	1224	5	FSM	ENSG00000187514.17	ENST00000409115.8	1215	5	-9	0	0	0	multi-exon	FALSE	canonical	3	22780	junction_2	1810.21946183329	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTTTTCTGTTTCAG	-10	True	NA	14	True	AATAAA	-45	NA	231708515	231713551	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231708752_231711347_231711420_231711889_231711984_231712442_231712517_231712803
H1_mix_00050775	chr2	+	1649	4	FSM	ENSG00000187514.17	ENST00000481928.1	1635	4	-14	0	0	0	multi-exon	FALSE	canonical	3	26303	junction_2	408.280132588725	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGAATTTTATTTTGCTG	-10	True	NA	-31	True	NA	NA	NA	231708515	231713506	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231708752_231711347_231711984_231712442_231712517_231712803
H1_mix_00050776	chr2	+	1249	5	FSM	ENSG00000187514.17	ENST00000341369.11	1212	5	-305	268	-305	0	multi-exon	FALSE	canonical	3	2340	junction_2	10632.0127210232	3110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAACCTTGTAAAAA	554	False	NA	NA	False	NA	NA	NA	231708210	231713268	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231708752_231711347_231711420_231711886_231711984_231712442_231712517_231712803
H1_mix_00050778	chr2	+	2500	6	FSM	ENSG00000144524.18	ENST00000620578.4	2500	6	0	0	0	0	multi-exon	TRUE	canonical	3	67	junction_2	351.730237540078	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTCATTGGAAATTCATT	4613	False	NA	11	True	AATAAA	-23	NA	231786382	231809254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231786539_231788554_231788733_231794262_231794352_231796105_231796309_231798858_231798965_231807486
H1_mix_00050779	chr2	+	2062	8	FSM	ENSG00000144524.18	ENST00000410017.5	2051	8	-11	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	397.432011898429	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTCGTGTCAATATTTGT	-13	True	NA	10	True	AATACA	-20	NA	231786433	231808723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231786539_231788554_231788733_231791732_231791809_231794262_231794352_231796105_231796309_231798858_231798965_231801139_231801208_231807486
H1_mix_00050780	chr2	+	2524	7	FSM	ENSG00000144524.18	ENST00000350033.8	2513	7	-11	0	0	0	multi-exon	FALSE	canonical	3	790	junction_3	81.7638877092652	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCTCATTGGAAATTCAT	-13	True	NA	10	True	AATAAA	-22	NA	231786433	231809253	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231786539_231788554_231788733_231791732_231791809_231794262_231794352_231796105_231796309_231798858_231798965_231807486
H1_mix_00050781	chr2	+	3299	7	FSM	ENSG00000144524.18	ENST00000461350.5	3299	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	444.037410836319	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTCGTGTCAATATTTGT	3207	False	NA	10	True	AATACA	-20	NA	231789653	231808723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231791174_231791732_231791809_231794262_231794352_231796105_231796309_231798858_231798965_231801139_231801208_231807486
H1_mix_00050783	chr2	+	2381	4	FSM	ENSG00000144524.18	ENST00000488111.1	2381	4	0	0	0	0	multi-exon	FALSE	canonical	3	850	junction_2	87.5099994286367	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCTCGTGTCAATATTTG	7069	False	NA	9	True	AATACA	-19	NA	231793515	231808722	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231794352_231796105_231796309_231798858_231798965_231807486
H1_mix_00050788	chr2	+	982	7	FSM	ENSG00000135930.15	ENST00000258416.8	967	7	-15	0	0	0	multi-exon	FALSE	canonical	3	1010	junction_6	142.384943804541	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTCTCATGCTCTTGCT	-11	True	NA	14	True	AATAAA	-14	NA	232550673	232569210	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_232550745_232556415_232556531_232557883_232558019_232564246_232564352_232566828_232566982_232567077_232567215_232568944
H1_mix_00050790	chr2	+	815	6	FSM	ENSG00000135930.15	ENST00000409322.5	797	6	-18	0	0	0	multi-exon	FALSE	canonical	3	171	junction_2	459.325418412698	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTGAGATCACTTAATAAAT	-11	True	NA	-18	True	NA	NA	NA	232550673	232569178	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_232550745_232556415_232556531_232564246_232564352_232566828_232566982_232567077_232567215_232568944
H1_mix_00050791	chr2	+	3534	8	FSM	ENSG00000135930.15	ENST00000409514.5	3525	8	-9	0	0	0	multi-exon	FALSE	canonical	3	44	junction_7	596.299506993605	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGGTCGTGGACTTGTC	-11	True	NA	18	True	AATAAA	-18	NA	232550673	232583642	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_232550745_232556415_232556531_232557883_232558019_232564246_232564352_232566828_232566982_232567077_232567215_232574262_232574342_232580903
H1_mix_00050792	chr2	+	5860	7	FSM	ENSG00000135930.15	ENST00000409098.5	3448	7	-87	-2325	-63	2325	multi-exon	FALSE	canonical	3	287	junction_6	405.774020306322	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTGAATAAGGCATTCCA	NA	False	NA	9	True	ATTAAA	-19	NA	232550595	232585969	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_232550745_232556415_232556531_232557883_232558019_232564246_232564352_232566828_232566982_232567077_232567215_232580903
H1_mix_00050799	chr2	+	589	7	FSM	ENSG00000204120.16	ENST00000425040.5	588	7	-1	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	81.8243375910995	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTGCGATTGACAGGAC	-3	True	NA	NA	False	NA	NA	NA	232697329	232756254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_232697393_232703423_232703490_232724573_232724692_232735154_232735239_232747614_232747745_232748986_232749083_232756222
H1_mix_00050801	chr2	+	2680	21	FSM	ENSG00000204120.16	ENST00000440945.5	2658	21	-22	0	0	0	multi-exon	TRUE	canonical	2	9	junction_9	42.557343667104	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGACCAGATGGTTTTG	-3	True	NA	93	True	AAGAAA	-30	NA	232697329	232819982	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_232697393_232703423_232703490_232735154_232735239_232747614_232747745_232748986_232749083_232756222_232756335_232760479_232760592_232761395_232761437_232787149_232787330_232790715_232790916_232791007_232791171_232791257_232791447_232794747_232794945_232796061_232796222_232806490_232806658_232809719_232809812_232811243_232811352_232812390_232812492_232815636_232815738_232816870_232817033_232819826
H1_mix_00050802	chr2	+	5755	28	FSM	ENSG00000204120.16	ENST00000409196.7	5747	28	-8	0	0	0	multi-exon	FALSE	canonical	2	9	junction_8	45.5048498297126	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTGCACCTCTTGTAC	-3	True	NA	22	True	AATAAA	-33	NA	232697329	232858627	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_232697393_232735154_232735239_232747614_232747745_232748986_232749083_232756222_232756335_232760479_232760592_232761395_232761437_232787149_232787330_232790715_232790916_232791007_232791171_232791257_232791447_232794747_232794945_232796061_232796222_232806490_232806658_232809719_232809812_232811243_232811352_232812390_232812492_232815636_232815738_232816870_232817033_232819826_232819986_232832856_232833094_232839848_232839972_232844045_232844256_232844368_232844575_232845731_232845887_232847347_232847572_232850261_232850410_232856792
H1_mix_00050803	chr2	+	5979	31	FSM	ENSG00000204120.16	ENST00000409547.5	5978	31	-1	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	56.6361094081231	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTGCACCTCTTGTAC	-3	True	NA	22	True	AATAAA	-33	NA	232697329	232858627	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_232697393_232700584_232700655_232703423_232703490_232734416_232734487_232735154_232735239_232747614_232747745_232748986_232749083_232756222_232756335_232760479_232760592_232761395_232761437_232787149_232787330_232790697_232790916_232791007_232791171_232791257_232791447_232794747_232794945_232796061_232796222_232806490_232806658_232809719_232809812_232811243_232811352_232812390_232812492_232815636_232815738_232816870_232817033_232819826_232819986_232832856_232833094_232839848_232839972_232844045_232844256_232844368_232844575_232845731_232845887_232847347_232847572_232850261_232850410_232856792
H1_mix_00050804	chr2	+	7817	29	FSM	ENSG00000204120.16	ENST00000373563.9	7816	29	-1	0	0	0	multi-exon	FALSE	canonical	3	135	junction_2	23.739739996513	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTCTGTACTGTCCTTC	-3	True	NA	NA	False	ATTAAA	-24	NA	232697329	232860605	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_232697393_232703423_232703490_232735154_232735239_232747614_232747745_232748986_232749083_232756222_232756335_232760479_232760592_232761395_232761437_232787149_232787330_232790697_232790916_232791007_232791171_232791257_232791447_232794747_232794945_232796061_232796222_232806490_232806658_232809719_232809812_232811243_232811352_232812390_232812492_232815636_232815738_232816870_232817033_232819826_232819986_232832856_232833094_232839848_232839972_232844045_232844256_232844368_232844575_232845731_232845887_232847347_232847572_232850261_232850410_232856792
H1_mix_00050805	chr2	+	5863	29	NIC	ENSG00000204120.16	novel	7816	29	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	51.6639948837383	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGATTGTATTCTATCTGA	10	True	NA	7	True	AATAAA	-18	NA	232697342	232858612	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_232697393_232724573_232724692_232735154_232735239_232747614_232747745_232748986_232749083_232756222_232756335_232760479_232760592_232761395_232761437_232787149_232787330_232790697_232790916_232791007_232791171_232791257_232791447_232794747_232794945_232796061_232796222_232806490_232806658_232809719_232809812_232811243_232811352_232812390_232812492_232815636_232815738_232816870_232817033_232819826_232819986_232832856_232833094_232839848_232839972_232844045_232844256_232844368_232844575_232845731_232845887_232847347_232847572_232850261_232850410_232856792
H1_mix_00050806	chr2	+	1261	7	FSM	ENSG00000204120.16	ENST00000482666.5	1261	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	21.733231083604	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGGTTGCATTGTATGG	29	False	NA	10	True	AATAAA	-16	NA	232697361	232736541	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_232697393_232700584_232700655_232703423_232703490_232724573_232724692_232731121_232731235_232735154_232735239_232735762
H1_mix_00050808	chr2	+	5841	31	NNC	ENSG00000204120.16	novel	5978	31	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	46.75634240994	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGATTGTATTCTATCTGA	29	False	NA	7	True	AATAAA	-18	NA	232697361	232858612	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_232697393_232700584_232700655_232703423_232703490_232735154_232735239_232747614_232747745_232748986_232749083_232756222_232756335_232760479_232760592_232761395_232761437_232787149_232787330_232790697_232790916_232791007_232791171_232791257_232791447_232794747_232794945_232796061_232796222_232806490_232806658_232809719_232809812_232811243_232811352_232812390_232812492_232815636_232815738_232816870_232817033_232819826_232819986_232832856_232833094_232839848_232839972_232844045_232844256_232844368_232844575_232845731_232845887_232847347_232847500_232847520_232847572_232850261_232850410_232856792
H1_mix_00050810	chr2	+	2750	2	FSM	ENSG00000182600.9	ENST00000467665.1	2782	2	32	0	32	0	multi-exon	FALSE	canonical	3	8	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATATATGATGCTTCTT	7	True	NA	23	True	AATAAA	-23	NA	232875830	232878704	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_232876123_232876246
H1_mix_00050812	chr2	+	3584	17	FSM	ENSG00000085978.22	ENST00000479942.5	3559	17	-25	0	-13	0	multi-exon	TRUE	canonical	3	40	junction_7	31.0492929669904	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCCATGCCTCTTGGTG	-9	True	NA	20	True	AATAAA	-22	NA	233251656	233295666	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_233251943_233256101_233256196_233263129_233263236_233263991_233264066_233264891_233265144_233270001_233270068_233272965_233273053_233273720_233273778_233274675_233274779_233277567_233277674_233281104_233281176_233282681_233282754_233289853_233290354_233292127_233292278_233292386_233292435_233293255_233293358_233294256
H1_mix_00050813	chr2	+	3314	18	FSM	ENSG00000085978.22	ENST00000392017.9	3298	18	-16	0	-13	0	multi-exon	FALSE	canonical	3	40	junction_7	30.1301674343071	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATGCCTCTTGGTGATT	-9	True	NA	23	True	AATAAA	-25	NA	233251656	233295669	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_233251943_233256101_233256196_233263129_233263236_233263991_233264066_233264891_233265144_233270001_233270068_233272965_233273053_233273720_233273778_233274675_233274779_233277567_233277674_233281104_233281176_233282681_233282754_233289853_233289975_233290247_233290354_233292127_233292278_233292386_233292435_233293255_233293358_233294256
H1_mix_00050814	chr2	+	3251	17	FSM	ENSG00000085978.22	ENST00000392020.8	3213	17	-46	8	-10	0	multi-exon	FALSE	canonical	3	70	junction_7	19.9655954081014	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCCATGCCTCTTGGTG	-6	True	NA	20	True	AATAAA	-22	NA	233251659	233295666	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_233251943_233256101_233256196_233263129_233263236_233263991_233264066_233264891_233265144_233270001_233270068_233272965_233273053_233274675_233274779_233277567_233277674_233281104_233281176_233282681_233282754_233289853_233289975_233290247_233290354_233292127_233292278_233292386_233292435_233293255_233293358_233294256
H1_mix_00050822	chr2	+	10889	18	FSM	ENSG00000157985.19	ENST00000304032.13	10889	18	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_11	16.1466034437019	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGCTTCCGTGGAGTTGT	-42	True	NA	13	True	AATAAA	-19	NA	235494042	236131793	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_235494850_235709178_235709238_235717556_235717645_235740962_235741049_235744697_235744840_235750353_235750489_235797758_235797887_235799366_235799523_235807238_235807332_235883344_235883450_235908737_235908907_235930764_235930924_235968461_235968624_236036560_236036716_236040750_236040842_236049058_236049282_236120191_236120448_236123918
H1_mix_00050823	chr2	+	1403	2	NIC	ENSG00000157985.19	novel	2165	10	NA	NA	18	-237245	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCGCTTGAGTGTTTGT	-24	True	NA	13	True	AATAAA	-14	NA	235494060	235507566	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_235494850_235506952
H1_mix_00050824	chr2	+	6138	17	FSM	ENSG00000157985.19	ENST00000409538.5	6138	17	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	15.1284861684836	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTCTTGTTTCACTTTG	-3	True	NA	7	True	AATATA	-14	NA	235669603	236126554	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_235671058_235709178_235709238_235717556_235717645_235740962_235741049_235744697_235744840_235750353_235750489_235797758_235797887_235799366_235799523_235807238_235807332_235883344_235883450_235908737_235908907_235968461_235968624_236036560_236036716_236040750_236040842_236049058_236049282_236120191_236120448_236123918
H1_mix_00050825	chr2	+	9932	16	FSM	ENSG00000157985.19	ENST00000614409.4	9932	16	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_11	8.38623210320874	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGGAGTTGTTGTTTTT	NA	False	NA	20	True	AATAAA	-26	NA	235709176	236131800	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_235709238_235717556_235717645_235740962_235741049_235744697_235744840_235750353_235750489_235797758_235797887_235799366_235799523_235807238_235807332_235883344_235883450_235908737_235908907_235968461_235968624_236036560_236036716_236040750_236040842_236049058_236049282_236120191_236120448_236123918
H1_mix_00050828	chr2	+	1654	9	FSM	ENSG00000198612.11	ENST00000392008.6	1654	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	465.647868565937	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAACTTAAGGTTATAACAG	-34	True	NA	-51	True	NA	NA	NA	237085881	237098618	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_237086043_237086731_237086797_237087126_237087198_237088604_237088654_237089861_237089995_237094089_237094198_237095821_237095885_237096821_237096870_237097662
H1_mix_00050834	chr2	+	3815	13	NIC	ENSG00000124831.19	novel	4092	24	NA	NA	-186	173	combination_of_known_junctions	FALSE	canonical	3	314	junction_4	193.083675010487	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCCGGTCATGACACACA	NA	False	NA	NA	False	NA	NA	NA	237627400	237781816	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_237627741_237708543_237708631_237748363_237748400_237749198_237749325_237751199_237751272_237753308_237753480_237756094_237756188_237760063_237760206_237769942_237769993_237772080_237772199_237772865_237772946_237774357_237774463_237779421
H1_mix_00050837	chr2	+	2030	12	NIC	ENSG00000124831.19	novel	4092	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	412	junction_1	149.67833278663	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAGCAATGTGGTTCTA	1	True	NA	15	True	ATTAAA	-17	NA	237627606	237780309	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_237627741_237708543_237708631_237748363_237748400_237749198_237749325_237753308_237753480_237756094_237756188_237760063_237760206_237769942_237769993_237772080_237772199_237772865_237772946_237774357_237774463_237779421
H1_mix_00050839	chr2	+	2275	12	NIC	ENSG00000124831.19	novel	3365	11	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	354	junction_1	159.209618049095	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTGGTTCTAATTTTT	-66	True	NA	21	True	ATTAAA	-23	NA	237692148	237780315	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_237692522_237708543_237708631_237748363_237748400_237749198_237749325_237753308_237753480_237756094_237756188_237760063_237760206_237769942_237769993_237772080_237772199_237772865_237772946_237774357_237774463_237779421
H1_mix_00050840	chr2	+	4422	9	NIC	ENSG00000124831.19	novel	3365	11	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	279	junction_8	265.684022854217	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGTTCCACTCTTTG	3665	False	NA	19	True	AATAAA	-21	NA	237692139	237765915	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_237692522_237708543_237708631_237748363_237748400_237749198_237749325_237751199_237751272_237753308_237753480_237756094_237756188_237760063_237760206_237762602
H1_mix_00050841	chr2	+	4370	10	FSM	ENSG00000124831.19	ENST00000244815.9	4370	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	354.694234517563	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGTTCCACTCTTTG	1	True	NA	19	True	AATAAA	-21	NA	237692215	237765915	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_237692522_237708543_237708631_237719522_237719568_237720771_237720823_237748363_237748400_237749198_237749325_237753308_237753480_237756094_237756188_237760063_237760206_237762602
H1_mix_00050843	chr2	+	2485	6	FSM	ENSG00000124831.19	ENST00000478958.5	2869	6	384	0	384	0	multi-exon	FALSE	canonical	3	16	junction_1	223.557062066936	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTGGTTCTAATTTTT	3829	False	NA	21	True	ATTAAA	-23	NA	237768580	237780315	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_237769819_237769942_237769993_237772080_237772199_237772865_237772946_237774357_237774463_237779421
H1_mix_00050844	chr2	+	1242	9	FSM	ENSG00000184182.19	ENST00000441728.6	1242	9	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	125.840610992636	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTTAATGTAAGTATAT	NA	False	NA	-7	True	NA	NA	NA	237966944	238041886	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_237967133_237973091_237973226_237987962_237987993_237994743_237994810_238025341_238025413_238030555_238030614_238032221_238032255_238035877_238035941_238041287
H1_mix_00050845	chr2	+	2137	10	FSM	ENSG00000184182.19	ENST00000272930.9	2137	10	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_5	27.2591586149511	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGAGGGTGGCCCCTGG	-20	True	NA	NA	False	NA	NA	NA	237967013	238042782	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_237967133_237973091_237973226_237987962_237987993_237994743_237994810_238016565_238016634_238025341_238025413_238030555_238030614_238032221_238032255_238035877_238035941_238041287
H1_mix_00050846	chr2	+	571	9	FSM	ENSG00000184182.19	ENST00000439780.5	571	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	139.11365632101	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGTTATGCCAGATGATA	26	True	NA	NA	False	AATAAA	-16	NA	237967059	238041320	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_237967133_237973091_237973226_237987962_237987993_237994743_237994810_238016565_238016634_238025341_238025413_238032221_238032255_238035877_238035941_238041287
H1_mix_00050848	chr2	+	1458	2	FSM	ENSG00000184182.19	ENST00000472479.1	1458	2	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAATGCTTTAATTATTTT	9805	False	NA	-17	True	NA	NA	NA	238035128	238041933	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_238035941_238041287
H1_mix_00050850	chr2	+	1527	11	NIC	ENSG00000132330.18	novel	2526	12	NA	NA	2	-6	combination_of_known_junctions	FALSE	canonical	3	32	junction_5	159.764232542832	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTATTTTGTTGGCAGTT	-2	True	NA	2	True	ATTAAA	-12	NA	238061021	238094843	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_238061144_238064356_238064470_238068064_238068166_238069296_238069478_238073782_238073848_238081708_238081837_238082044_238082210_238083247_238083355_238091217_238091255_238093860_238093945_238094419
H1_mix_00050851	chr2	+	1774	8	FSM	ENSG00000132330.18	ENST00000409736.6	1774	8	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_4	32.5914725293696	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGAGTGTGTGTTTGTTT	7	True	NA	36	True	NA	NA	NA	238061030	238092083	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_238061144_238064356_238064470_238068064_238068166_238069296_238069478_238081708_238081837_238082044_238082210_238083247_238083355_238091217
H1_mix_00050852	chr2	+	2186	11	NIC	ENSG00000132330.18	novel	2450	12	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	159.375531371663	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGGATCCTGTGGTTTC	24	True	NA	16	True	AATAAA	-17	NA	238061047	238099413	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_238061144_238064356_238064470_238073782_238073848_238081708_238081837_238082044_238082210_238083247_238083355_238091217_238091255_238093860_238093945_238094419_238094523_238096800_238096877_238098201
H1_mix_00050853	chr2	+	2384	12	NIC	ENSG00000132330.18	novel	2450	12	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	125.826195225631	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGGATCCTGTGGTTTC	39	False	NA	16	True	AATAAA	-17	NA	238061062	238099413	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_238061144_238064356_238064470_238068068_238068166_238069296_238069478_238081708_238081837_238082044_238082210_238083247_238083355_238091217_238091255_238093860_238093945_238094419_238094523_238096800_238096877_238098201
H1_mix_00050854	chr2	+	816	4	FSM	ENSG00000132330.18	ENST00000416757.1	807	4	-9	0	0	0	multi-exon	FALSE	canonical	3	429	junction_3	10.6562449087639	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTACGCCTGCAAATAGGC	58	False	NA	NA	False	AATAAA	-16	NA	238061081	238069836	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_238061144_238064356_238064470_238068064_238068166_238069296
H1_mix_00050858	chr2	+	3380	3	NIC	ENSG00000132330.18	novel	3800	4	NA	NA	623	-5	intron_retention	FALSE	canonical	3	398	junction_1	40.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCCTTGTCTGTGTCTCT	NA	False	NA	15	True	TTTAAA	-8	NA	238079187	238091468	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_238082210_238083247_238083355_238091217
H1_mix_00050860	chr2	+	3401	2	FSM	ENSG00000144488.15	ENST00000477241.1	3448	2	46	1	46	-1	multi-exon	FALSE	canonical	1	1	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCGCACCCCCTCTCTTGC	1558	False	NA	1	True	AATAAA	-13	NA	238128993	238133280	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_238129242_238130127
H1_mix_00050867	chr2	+	1501	5	NIC	ENSG00000065802.12	novel	6891	5	NA	NA	1	307	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	70.5141829705202	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTTCATGAACTTGCTG	-5	True	NA	-2	True	AATAGA	-10	NA	238427029	238446958	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_238427120_238433548_238433696_238435710_238436014_238444341_238444728_238446383
H1_mix_00050871	chr2	+	1560	3	FSM	ENSG00000188542.10	ENST00000343217.6	1555	3	-5	0	-5	0	multi-exon	FALSE	canonical	3	7	junction_2	8.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCAGCTTTGGTAAACTG	1900	False	NA	10	True	AATAAA	-18	NA	240560048	240564014	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_240561078_240561329_240561520_240563673
H1_mix_00050872	chr2	+	4891	2	FSM	ENSG00000188542.10	ENST00000405954.2	4648	2	-243	0	60	0	multi-exon	FALSE	canonical	3	24	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCTTTTCCAATACTCG	1965	False	NA	NA	False	AGTAAA	-20	NA	240560113	240565256	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_240561078_240561329
H1_mix_00050874	chr2	+	3121	11	FSM	ENSG00000142327.13	ENST00000270357.10	5761	11	0	2640	0	5	multi-exon	TRUE	canonical	3	86	junction_8	8.23164625090267	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCTGCGCTCTTTCTCGC	-12	True	NA	21	True	ATTAAA	-21	NA	240568483	240578732	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_240569115_240572422_240572564_240573109_240573262_240573774_240573892_240574112_240574349_240574514_240574629_240575029_240575143_240575501_240575611_240576534_240576766_240576847_240576991_240577598
H1_mix_00050877	chr2	+	2986	12	NIC	ENSG00000142330.20	novel	2621	12	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_9	61.5910265010622	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGCGCTGATGATTTGCA	-7	True	NA	-7	True	AATAAA	-2	NA	240586733	240599084	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_240587053_240589342_240589475_240590814_240591012_240591932_240592151_240593905_240594048_240594542_240594710_240595023_240595305_240595933_240596522_240596680_240596943_240597887_240598088_240598351_240598398_240598650
H1_mix_00050879	chr2	+	2698	13	NNC	ENSG00000142330.20	novel	2621	12	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	70.5377656924919	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCAGTCTTGCTCCAGGT	2	True	NA	12	True	AATAAA	-21	NA	240586742	240599103	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_240587053_240589342_240589394_240589532_240589701_240590814_240591012_240591932_240592151_240593905_240594048_240594542_240594710_240595023_240595305_240596318_240596522_240596680_240596943_240597887_240598088_240598351_240598398_240598650
H1_mix_00050881	chr2	+	1999	10	FSM	ENSG00000142330.20	ENST00000354082.8	1999	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	54.8738170940307	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGCGCTGATGATTTGCA	130	False	NA	-7	True	AATAAA	-2	NA	240586870	240599084	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_240587053_240589342_240589475_240590814_240591012_240591932_240592151_240593905_240594048_240594542_240594710_240595023_240595305_240597887_240598088_240598351_240598398_240598650
H1_mix_00050883	chr2	+	4406	9	FSM	ENSG00000142330.20	ENST00000494738.5	4406	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	70.4432395620758	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCAGTCTTGCTCCAGGT	3143	False	NA	12	True	AATAAA	-21	NA	240589883	240599103	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_240592151_240593905_240594048_240594542_240594710_240595023_240595305_240595933_240596522_240596680_240596943_240597887_240598088_240598351_240598398_240598650
H1_mix_00050887	chr2	+	988	8	FSM	ENSG00000115685.15	ENST00000402734.5	883	8	-105	0	-89	0	multi-exon	FALSE	canonical	3	42	junction_1	174.676026648519	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTACTTGTTTTTTTCT	NA	False	NA	16	True	AATAAA	-17	NA	241149486	241167172	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241149709_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241167044
H1_mix_00050888	chr2	+	1954	9	FSM	ENSG00000115685.15	ENST00000272983.12	1954	9	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	163.485043276136	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGATGCCGTTGCAAT	17	False	NA	-12	True	AATAAA	-40	NA	241149657	241182985	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241150548_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241169780_241169868_241182646
H1_mix_00050889	chr2	+	978	9	FSM	ENSG00000115685.15	ENST00000406106.7	965	9	-13	0	0	0	multi-exon	FALSE	canonical	3	243	junction_8	97.3420997051122	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTACTTGTTTTTTTCTGT	-13	True	NA	18	True	AATAAA	-19	NA	241150466	241167174	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241150548_241153475_241153605_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241167044
H1_mix_00050890	chr2	+	1941	10	FSM	ENSG00000115685.15	ENST00000234038.11	1941	10	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_8	95.0451484659453	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGAAGTCTGGATTTAATG	-13	True	NA	21	True	TATAAA	-18	NA	241150466	241183652	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241150548_241153475_241153605_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241169780_241169868_241182646
H1_mix_00050893	chr2	+	3289	12	FSM	ENSG00000168385.18	ENST00000407971.5	3267	12	-22	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	1125.52503818007	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTATTTCTCTTGGTTAT	-5	True	NA	NA	False	AATAAA	-23	NA	241315860	241354027	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241315983_241325992_241326114_241335125_241335213_241335974_241336099_241337381_241337517_241337672_241337791_241342991_241343094_241343751_241343898_241346165_241346250_241348133_241348192_241350072_241350204_241351966
H1_mix_00050895	chr2	+	3275	13	FSM	ENSG00000168385.18	ENST00000391971.7	3251	13	-24	0	0	0	multi-exon	FALSE	canonical	3	3174	junction_1	312.962324676097	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTATTTCTCTTGGTTAT	-23	True	NA	NA	False	AATAAA	-23	NA	241315900	241354027	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241315983_241324215_241324242_241325992_241326114_241335125_241335213_241335974_241336099_241337381_241337517_241337672_241337791_241342991_241343094_241343751_241343898_241346165_241346250_241348133_241348192_241350072_241350204_241351966
H1_mix_00050908	chr2	+	7131	13	ISM	ENSG00000006607.14	ENST00000627550.2	2122	18	-3	18629	1	0	5prime_fragment	FALSE	canonical	3	46	junction_11	9.82768199187038	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTTTTAGCTTTCTTT	-4	True	NA	18	True	AATAAA	-31	NA	241356285	241447149	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_241356389_241373083_241373291_241403827_241403933_241404798_241404842_241407536_241407616_241411032_241411131_241413306_241413422_241417961_241418110_241431678_241431775_241434157_241434322_241434961_241435031_241436480_241436539_241441303
H1_mix_00050909	chr2	+	2685	18	FSM	ENSG00000006607.14	ENST00000627550.2	2122	18	-3	-560	1	302	multi-exon	FALSE	canonical	2	8	junction_17	17.9680608601113	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATACAACTCCTGGAGCGC	-4	True	NA	NA	False	NA	NA	NA	241356285	241466338	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241356389_241373083_241373291_241403827_241403933_241404798_241404842_241407536_241407616_241411032_241411131_241413306_241413422_241417961_241418110_241431678_241431775_241434157_241434322_241434961_241435031_241436480_241436539_241441303_241441557_241456746_241456923_241462522_241462613_241463334_241463469_241463898_241463981_241465673
H1_mix_00050911	chr2	+	1129	10	NNC	ENSG00000006607.14	novel	2122	18	NA	NA	64	422	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_9	19.8556519303761	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAATTTACTGAAATGAGT	49	False	NA	NA	False	AATAAA	-14	NA	241356362	241432663	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_241356389_241373083_241373291_241403827_241403933_241404798_241404842_241407536_241407616_241411032_241411131_241413306_241413422_241417961_241418110_241431678_241431775_241432451
H1_mix_00050914	chr2	+	3273	6	FSM	ENSG00000006607.14	ENST00000470617.1	3273	6	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_3	3.49857113690718	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCATTCTCCTCTGCCT	NA	False	NA	9	True	AATAAA	-17	NA	241488147	241494840	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241490045_241491060_241491180_241491515_241491680_241492928_241493037_241493292_241493445_241494007
H1_mix_00050917	chr2	+	2155	5	NNC	ENSG00000176720.6	novel	2626	5	NA	NA	12	0	at_least_one_novel_splicesite	TRUE	canonical	3	27	junction_3	56.1827375623509	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGAATGTCACTGTGTGT	13	True	NA	22	True	AATAAA	-28	NA	241558756	241574131	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_241558994_241570124_241570289_241572296_241572813_241572853_241573016_241573055
H1_mix_00050920	chr2	+	2388	12	FSM	ENSG00000168397.17	ENST00000494465.5	2365	12	-23	0	0	0	multi-exon	FALSE	canonical	3	40	junction_7	262.675742036728	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAATTAAAGTCCTGTTT	NA	False	NA	-9	True	NA	NA	NA	241637611	241672599	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653306_241653370_241653511_241653611_241654545_241654648_241655270_241655344_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311
H1_mix_00050926	chr2	+	680	7	FSM	ENSG00000168397.17	ENST00000400771.7	663	7	-17	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	251.695859234028	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCCAGGGTTCCCACC	1	True	NA	NA	False	NA	NA	NA	241637692	241668221	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653511_241653611_241654545_241654648_241666644_241666839_241668142
H1_mix_00050928	chr2	+	3668	13	FSM	ENSG00000168397.17	ENST00000482507.5	2414	13	-36	-1218	0	0	multi-exon	FALSE	canonical	3	122	junction_3	207.661984965954	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAACCTTGTGTCTAT	14	False	NA	66	True	NA	NA	NA	241637661	241673849	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653306_241653370_241653511_241653611_241654545_241654648_241655270_241655344_241659107_241659188_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311
H1_mix_00050929	chr2	+	2797	13	FSM	ENSG00000168397.17	ENST00000404914.8	2797	13	0	0	0	0	multi-exon	FALSE	canonical	3	555	junction_7	74.2836156602218	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGTCTATTTTTTCCT	1	True	NA	74	True	AAAACA	-3	NA	241637692	241673857	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653511_241653611_241654545_241654648_241655270_241655344_241659107_241659188_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311_241671406_241672190
H1_mix_00050931	chr2	+	1585	13	FSM	ENSG00000168397.17	ENST00000344376.9	1566	13	-19	0	-19	0	multi-exon	FALSE	canonical	3	122	junction_2	207.690658726439	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGGTTTGGAATTAAAGT	NA	False	NA	-16	True	NA	NA	NA	241650987	241672592	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241651112_241651263_241651336_241653306_241653370_241653511_241653611_241654545_241654648_241655270_241655344_241659107_241659188_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311_241671406_241672190
H1_mix_00050936	chr2	+	3060	5	FSM	ENSG00000168395.16	ENST00000492488.5	822	5	-2069	-169	-2069	169	multi-exon	FALSE	canonical	0	0	junction_4	87.8617522019678	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGAAGTTTTTTGAGATA	NA	False	NA	3	True	ATTAAA	-16	NA	241699965	241712549	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241702103_241704652_241704725_241709215_241709383_241711376_241711489_241711977
H1_mix_00050937	chr2	+	7053	8	FSM	ENSG00000168395.16	ENST00000313552.11	5197	8	-1856	0	-1852	0	multi-exon	FALSE	canonical	0	0	junction_4	67.2976938077133	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTGAAAGTGCATCTGTA	NA	False	NA	NA	False	AATAAA	-22	NA	241700182	241729478	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241702103_241704652_241704725_241709215_241709383_241711376_241711489_241711977_241712072_241722938_241723075_241723209_241723272_241724988
H1_mix_00050938	chr2	+	2430	4	FSM	ENSG00000168395.16	ENST00000493261.5	543	4	-2080	193	-2069	0	multi-exon	FALSE	canonical	3	179	junction_3	19.8158185969358	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAAGGACAAGATGGAGGG	NA	False	NA	NA	False	NA	NA	NA	241699965	241711430	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241702103_241704652_241704725_241709215_241709383_241711376
H1_mix_00050939	chr2	+	1136	4	FSM	ENSG00000168395.16	ENST00000493578.1	1136	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	78.5153912724548	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTTTGCCTGTGCTGA	NA	False	NA	13	True	AATAAA	-23	NA	241720740	241724038	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241721431_241722938_241723075_241723209_241723272_241723790
H1_mix_00050940	chr2	+	2573	10	FSM	ENSG00000180902.18	ENST00000321264.9	2566	10	-9	2	6	0	multi-exon	FALSE	canonical	3	24	junction_1	6.51114903288161	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTTCTCTTTGCTTCTGT	NA	False	NA	9	True	AGTAAA	-17	NA	241734620	241768809	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241734696_241735132_241735517_241741032_241741091_241742434_241742575_241743621_241743816_241744708_241744878_241750150_241750295_241751245_241751389_241755848_241756015_241767709
H1_mix_00050942	chr2	+	473	4	FSM	ENSG00000220804.10	ENST00000444990.6	577	4	62	42	6	0	multi-exon	FALSE	canonical	2	10	junction_2	4.18993502999218	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTTGCAATGTCAGAT	17	True	NA	NA	False	AATAAA	-28	NA	242088720	242116330	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_242088802_242094886_242095028_242114638_242114742_242116182
H1_mix_00050944	chr2	-	3880	2	FSM	ENSG00000184731.6	ENST00000327669.5	3880	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGATTTATGAGTTTGAG	-6	True	NA	-5	True	AATAAA	-21	NA	46505	38813	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_41628_45439
H1_mix_00050946	chr2	-	3066	9	NIC	ENSG00000035115.22	novel	2463	11	NA	NA	-189	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_8	72.7013368171452	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCAATTTTGTTTTTCT	3288	False	NA	-6	True	AATAAA	-25	NA	261512	218143	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_219002_229965_230045_231022_231192_233100_233230_234159_234273_247537_247603_249730_249845_253004_253116_260084
H1_mix_00050947	chr2	-	1709	9	FSM	ENSG00000035115.22	ENST00000403712.6	1695	9	0	-14	0	14	multi-exon	FALSE	canonical	3	35	junction_8	66.1829849734809	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTGTAAGGTAGGCA	1	True	NA	16	True	TTTAAA	-38	NA	264032	218121	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219002_229965_230045_231022_231192_233100_233230_234159_234273_247537_247603_249730_249845_253004_253116_263983
H1_mix_00050948	chr2	-	2052	9	NIC	ENSG00000035115.22	novel	1999	10	NA	NA	71	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_8	51.1175116765282	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCAATTTTGTTTTTCT	303	False	NA	-6	True	AATAAA	-25	NA	264497	218143	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_219002_229965_230045_231022_231192_233100_233230_234159_234273_247537_247603_249730_249845_253004_253116_264083
H1_mix_00050949	chr2	-	2004	10	FSM	ENSG00000035115.22	ENST00000463865.5	1999	10	0	-5	0	0	multi-exon	FALSE	canonical	1	4	junction_1	89.9202664641718	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCAATTTTGTTTTTCT	408	False	NA	-6	True	AATAAA	-25	NA	264392	218143	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219002_224863_224921_229965_230045_231022_231192_233100_233230_234159_234273_247537_247603_249730_249845_253004_253116_264083
H1_mix_00050950	chr2	-	1698	9	NIC	ENSG00000035115.22	novel	1744	10	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_8	65.566759871142	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCAATTTTGTTTTTCT	199	False	NA	-6	True	AATAAA	-25	NA	264601	218143	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_219002_229965_230045_231022_231192_233100_233230_234159_234273_247537_247603_249730_249845_253004_253116_264541
H1_mix_00050953	chr2	-	2119	7	FSM	ENSG00000035115.22	ENST00000471948.5	2119	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_6	78.1302331580633	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGTCTGTCACTGCCTC	817	False	NA	-4	True	AATAAA	-14	NA	263983	230377	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_231192_233100_233230_234159_234273_247537_247603_249730_249845_253004_253116_263210
H1_mix_00050955	chr2	-	1368	7	NNC	ENSG00000189292.16	novel	1184	6	NA	NA	-167	-5	intron_retention	FALSE	canonical	3	8	junction_6	16.9312334656004	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACTAGTCTTCAAAGTG	NA	False	NA	-11	True	AATAAA	-29	NA	289018	279562	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_280153_283110_283176_286122_286204_286289_286344_287582_287893_288552_288790_288987
H1_mix_00050956	chr2	-	8279	4	FSM	ENSG00000151353.15	ENST00000477202.1	1767	4	238	-6750	218	1416	multi-exon	FALSE	canonical	3	273	junction_1	3.74165738677394	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAACACAGAGACACGTG	1028	False	NA	NA	False	AATACA	-37	NA	676424	662460	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_669676_669756_669851_672807_672863_675509
H1_mix_00050957	chr2	-	6187	5	FSM	ENSG00000151353.15	ENST00000281017.8	6187	5	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_4	12.9687123493429	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTCTGTAAGTTACTG	0	True	NA	0	True	AATAAA	-32	NA	677406	663876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_669676_669756_669851_672807_672863_675509_675631_677288
H1_mix_00050959	chr2	-	587	1	FSM	ENSG00000272342.1	ENST00000606068.1	577	1	0	-10	0	10	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTGGGTCCTGTGACTC	NA	False	NA	NA	False	AATAAA	-29	NA	740164	739577	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_739600_740200
H1_mix_00050960	chr2	-	990	2	FSM	ENSG00000235688.3	ENST00000692544.1	976	2	-14	0	-12	0	multi-exon	FALSE	canonical	3	17	junction_1	0	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTCTGACTCCGACTTG	1172	False	NA	-3	True	AATAAA	-29	NA	950777	949626	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_950387_950547
H1_mix_00050961	chr2	-	1434	2	FSM	ENSG00000203635.2	ENST00000366424.2	1641	2	0	207	0	-207	multi-exon	FALSE	canonical	2	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGGAGGTTGCAGTGAGCT	-5	True	NA	NA	False	NA	NA	NA	1625419	1620716	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_1621980_1625248
H1_mix_00050962	chr2	-	6817	23	FSM	ENSG00000130508.11	ENST00000252804.9	6817	23	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_19	62.2271399161874	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGCTTTATTTTTTTTT	-2	True	NA	-1	True	AATAAA	-22	NA	1744515	1631886	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_1634324_1635407_1635522_1638845_1638979_1639301_1639423_1643367_1643577_1644617_1644753_1648171_1649676_1653627_1653786_1654399_1654509_1660880_1661038_1662071_1662185_1663604_1663764_1664957_1665075_1666213_1666487_1673642_1673813_1676926_1677045_1680192_1680363_1683655_1683728_1684079_1684152_1687631_1687704_1691927_1692000_1693062_1693135_1744255
H1_mix_00050963	chr2	-	6784	22	NIC	ENSG00000130508.11	novel	6817	23	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	3	155	junction_19	79.2167725431565	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGCTTTATTTTTTTTT	21	False	NA	-1	True	AATAAA	-22	NA	1744554	1631886	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_1634324_1635407_1635522_1638845_1638979_1639301_1639423_1643367_1643577_1644617_1644753_1648171_1649676_1653627_1653786_1654399_1654509_1660880_1661038_1662071_1662185_1663604_1663764_1664957_1665075_1666213_1666487_1673642_1673813_1676926_1677045_1680192_1680363_1683655_1683728_1684079_1684152_1691927_1692000_1693062_1693135_1744255
H1_mix_00050964	chr2	-	772	2	FSM	ENSG00000130508.11	ENST00000493779.1	772	2	0	0	0	0	multi-exon	FALSE	canonical	3	473	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAGCAACGTGTGCAGCA	NA	False	NA	NA	False	NA	NA	NA	1653966	1649242	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_1649676_1653627
H1_mix_00050965	chr2	-	720	7	FSM	ENSG00000130508.11	ENST00000425171.1	720	7	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_4	102.424633538791	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCGAGCCCCAGGACGCA	73	False	NA	NA	False	AAAAAG	-41	NA	1744502	1677029	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_1677045_1680192_1680363_1683655_1683728_1684079_1684152_1691927_1692000_1693062_1693135_1744255
H1_mix_00050966	chr2	-	519	7	FSM	ENSG00000130508.11	ENST00000485177.1	519	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	147.246297821786	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCCAGACGCATCCAGGGA	NA	False	NA	NA	False	NA	NA	NA	1744852	1680252	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_1680363_1683655_1683728_1684079_1684152_1687631_1687704_1691927_1692000_1693062_1693135_1744803
H1_mix_00050967	chr2	-	1794	10	FSM	ENSG00000032389.13	ENST00000398659.8	1795	10	0	1	0	-1	multi-exon	FALSE	canonical	0	0	junction_6	90.9224333643182	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCCTGGGTCTTTGTCCA	4	True	NA	-3	True	NA	NA	NA	3377830	3188925	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_3189509_3192413_3192582_3193998_3194167_3196880_3197018_3214148_3214249_3257298_3257456_3274338_3274420_3338016_3338150_3354549_3354634_3377647
H1_mix_00050968	chr2	-	1657	9	FSM	ENSG00000032389.13	ENST00000382125.9	1657	9	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_6	18.8331489666492	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGCTCGGCTCATTCTT	16	True	NA	-5	True	AATAAA	-17	NA	3377818	3188969	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_3189509_3192413_3192582_3193998_3194167_3196880_3197018_3214148_3214249_3257298_3257456_3338016_3338150_3354549_3354634_3377647
H1_mix_00050969	chr2	-	672	6	FSM	ENSG00000032389.13	ENST00000435721.5	672	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	83.382492167121	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCGGAGACGACTGTAAGG	53	False	NA	NA	False	NA	NA	NA	3377781	3194082	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_3194167_3196880_3197018_3214148_3214249_3338016_3338150_3354549_3354634_3377647
H1_mix_00050970	chr2	-	4086	1	Genic_Genomic	ENSG00000225234.1	novel	NA	NA	NA	NA	-2304	614	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTCACATTTGAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	3484713	3480627	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr2_-_3480600_3484700
H1_mix_00050971	chr2	-	2192	4	FSM	ENSG00000182551.14	ENST00000327435.11	2181	4	0	-11	0	11	multi-exon	FALSE	canonical	3	775	junction_3	49.5580467734555	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGACAAATGCAGCATGA	-10	True	NA	8	True	AATAAA	-27	NA	3519531	3497354	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_3499083_3500813_3500994_3513856_3513977_3519367
H1_mix_00050972	chr2	-	4398	4	FSM	ENSG00000182551.14	ENST00000382093.5	3870	4	0	-528	0	528	multi-exon	FALSE	canonical	3	20	junction_3	405.415287767439	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGATTTTTTTTAATGGA	1829	False	NA	-19	True	ATTAAA	-14	NA	3517747	3497924	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_3499083_3500813_3500994_3513856_3513977_3514807
H1_mix_00050973	chr2	-	737	3	FSM	ENSG00000242282.6	ENST00000422961.5	791	3	0	54	0	-54	multi-exon	FALSE	canonical	2	5	junction_1	4	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGGTAGAAAACTTGGATA	NA	False	NA	NA	False	AATAAA	-30	NA	3536873	3531866	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_3532311_3534112_3534256_3536723
H1_mix_00050974	chr2	-	5291	8	FSM	ENSG00000171865.10	ENST00000315212.4	5289	8	0	-2	0	2	multi-exon	FALSE	canonical	3	456	junction_6	32.8621114255755	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCGTCTTTGTCTTCTGT	-2	True	NA	1	True	AATAAA	-35	NA	3558333	3541427	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_3545872_3547930_3548056_3548639_3548725_3549057_3549113_3550372_3550473_3552143_3552309_3556788_3556905_3558132
H1_mix_00050976	chr2	-	2120	8	FSM	ENSG00000171865.10	ENST00000436842.5	2120	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	175.443461443467	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGTAGTA	-2	True	NA	NA	False	NA	NA	NA	3558289	3544792	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_3545872_3547930_3548056_3548639_3548725_3549057_3549113_3550372_3550473_3552143_3552309_3556788_3556905_3557894
H1_mix_00050977	chr2	-	4569	2	FSM	ENSG00000287126.1	ENST00000656939.1	3700	2	-844	-25	-844	25	multi-exon	TRUE	canonical	2	5	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATATTCTTTTCTTTA	1820	False	NA	NA	False	AATAAA	-41	NA	3575944	3568479	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_3571239_3574134
H1_mix_00050978	chr2	-	2313	5	FSM	ENSG00000228203.7	ENST00000653376.1	2472	5	0	159	0	-115	multi-exon	FALSE	canonical	0	0	junction_2	0.82915619758885	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAAGGTGGCAAGATAAA	NA	False	NA	NA	False	AATAAA	-14	NA	6918707	6912452	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_6913665_6914192_6914351_6915822_6915968_6916849_6917225_6918284
H1_mix_00050979	chr2	-	7287	29	NIC	ENSG00000134313.17	novel	7348	30	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	93	junction_13	17.3850084960624	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTTGTCACATGTCT	-3	True	NA	63	True	AATAAA	-13	NA	8837612	8728860	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_8731983_8733443_8733681_8734654_8734754_8736867_8737000_8747886_8748001_8750111_8750336_8751465_8751645_8770669_8770833_8776747_8776893_8778638_8778728_8778895_8779140_8779673_8779815_8785740_8786031_8786205_8786358_8788646_8788813_8789879_8790060_8791059_8791225_8793809_8793988_8796770_8796870_8798201_8798301_8800399_8800499_8802929_8803128_8806270_8806370_8812394_8812494_8813236_8813336_8817617_8817717_8818694_8818794_8826985_8827130_8837479
H1_mix_00050980	chr2	-	7291	29	NIC	ENSG00000134313.17	novel	7254	30	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	37	junction_24	23.9841305952116	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTTGTCACATGTCT	-4	True	NA	63	True	AATAAA	-13	NA	8837613	8728860	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_8731983_8733443_8733681_8734654_8734754_8736867_8737000_8747886_8748001_8750111_8750336_8751465_8751645_8770669_8770833_8776747_8776893_8778638_8778728_8778895_8779140_8779673_8779815_8785740_8786031_8786205_8786358_8788646_8788813_8789879_8790060_8791059_8791225_8793809_8793988_8796770_8796870_8798201_8798301_8800399_8800499_8802929_8803128_8806270_8806370_8812394_8812497_8813236_8813336_8817617_8817717_8818694_8818794_8826985_8827130_8837479
H1_mix_00050981	chr2	-	4084	28	FSM	ENSG00000134313.17	ENST00000489024.5	4084	28	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	33.2472138544109	985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCAATTCCCAGGATTC	-3	True	NA	NA	False	NA	NA	NA	8837612	8731952	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_8731983_8733443_8733681_8734654_8734754_8736867_8737000_8750111_8750336_8751465_8751645_8770669_8770833_8776747_8776893_8778638_8778728_8778895_8779140_8779673_8779815_8785740_8786031_8786205_8786358_8788646_8788813_8789879_8790060_8791059_8791225_8793809_8793988_8796770_8796870_8798201_8798301_8800399_8800499_8802929_8803128_8806270_8806370_8812394_8812497_8813236_8813336_8817617_8817717_8818694_8818794_8826985_8827130_8837479
H1_mix_00050982	chr2	-	593	3	FSM	ENSG00000134313.17	ENST00000471685.2	1609	3	751	265	751	-265	multi-exon	FALSE	canonical	3	121	junction_2	19	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCAGCCCCGCACGGTGA	7073	False	NA	NA	False	NA	NA	NA	8737289	8733608	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_8733681_8734654_8734754_8736867
H1_mix_00050983	chr2	-	7622	13	FSM	ENSG00000143797.12	ENST00000305997.8	7622	13	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_5	14.5093360748634	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTGTGTGTGTTTGCTAA	23	True	NA	0	True	ATTAAA	-17	NA	9003684	8852689	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_8858905_8860612_8860765_8862589_8862723_8864169_8864235_8868445_8868550_8873107_8873301_8877029_8877214_8882510_8882566_8888017_8888074_8908620_8908717_8943186_8943265_8958496_8958643_9003539
H1_mix_00050987	chr2	-	528	2	NNC	ENSG00000143797.12	novel	7622	13	NA	NA	-135	-94165	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCGAAGGAGTGTTAAACA	NA	False	NA	-19	True	AATAAA	-14	NA	9003844	9002318	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_9002542_9003539
H1_mix_00050988	chr2	-	4859	8	FSM	ENSG00000119185.13	ENST00000360635.7	4859	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	158.71344991422	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCTCTGAGTTTTTAAAA	445	False	NA	NA	False	TATAAA	-23	NA	9423229	9403474	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9419989_9420101_9422478
H1_mix_00050989	chr2	-	4153	7	FSM	ENSG00000119185.13	ENST00000355346.9	4153	7	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_6	42.1966296705739	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCTCTGAGTTTTTAAAA	-29	True	NA	NA	False	TATAAA	-23	NA	9423528	9403474	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9423372
H1_mix_00050990	chr2	-	1772	6	FSM	ENSG00000119185.13	ENST00000238091.8	1772	6	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	111.687062813918	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGTCCATTTAAAAGTAT	-7	True	NA	-18	True	AATAAA	-2	NA	9423506	9405683	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_9406906_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9423372
H1_mix_00050992	chr2	-	1027	5	FSM	ENSG00000119185.13	ENST00000490426.5	1027	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_4	136.861928599593	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAGACTAGATGTCACAG	37	True	NA	NA	False	NA	NA	NA	9423462	9406348	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9423372
H1_mix_00050994	chr2	-	873	6	FSM	ENSG00000119185.13	ENST00000464228.5	861	6	0	-12	0	0	multi-exon	FALSE	canonical	3	38	junction_4	131.266141864534	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTCATCTATTTTCTGG	-1	True	NA	-10	True	ATTAAA	-34	NA	9423500	9406647	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9418625_9418733_9423372
H1_mix_00050997	chr2	-	4397	19	FSM	ENSG00000151694.14	ENST00000310823.8	4391	19	0	-6	0	6	multi-exon	FALSE	canonical	3	113	junction_17	19.5151096889779	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTATAAAACTTCCCTGA	24	False	9555854	1	True	AATAAA	-23	NA	9555830	9488479	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_9490519_9491100_9491152_9492897_9492987_9493746_9493826_9494636_9494768_9497113_9497249_9502172_9502277_9505165_9505366_9509978_9510132_9517900_9517990_9518102_9518248_9521202_9521317_9523248_9523339_9526110_9526245_9527785_9527955_9535833_9535923_9536697_9536829_9543152_9543286_9555508
H1_mix_00050998	chr2	-	3488	19	FSM	ENSG00000151694.14	ENST00000649227.1	3488	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	38.511862850905	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCTCAAAAAAAAAAAAAAAA	-11	True	NA	NA	False	NA	NA	NA	9555788	9489287	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_9490519_9491100_9491152_9492897_9492987_9493746_9493826_9494636_9494768_9497113_9497249_9502172_9502277_9505165_9505366_9509978_9510132_9517900_9517990_9518102_9518248_9521202_9521317_9523248_9523339_9526110_9526245_9527785_9527955_9535833_9535923_9536697_9536829_9543152_9543227_9555508
H1_mix_00050999	chr2	-	501	3	FSM	ENSG00000151694.14	ENST00000649068.1	501	3	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_2	20	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCGAGGATGAGGGGATGG	NA	False	NA	NA	False	NA	NA	NA	9505318	9497004	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_9497249_9502172_9502277_9505165
H1_mix_00051000	chr2	-	967	5	FSM	ENSG00000151694.14	ENST00000478059.1	1073	5	-70	176	-14	-176	multi-exon	FALSE	canonical	3	113	junction_3	12.8160056179763	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTGGCATGAAAATAAGA	10	True	NA	NA	False	NA	NA	NA	9555844	9527676	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_9527955_9535833_9535923_9536697_9536829_9543152_9543286_9555508
H1_mix_00051001	chr2	-	2229	5	FSM	ENSG00000134308.14	ENST00000381844.8	2216	5	0	-13	0	8	multi-exon	FALSE	canonical	3	3274	junction_3	299.838602418034	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGAGTGCCTTGGCTGTT	-16	True	NA	1	True	AATAAA	-37	NA	9630616	9583958	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_9585346_9587413_9587510_9588164_9588329_9591391_9591516_9630158
H1_mix_00051005	chr2	-	1878	1	FSM	ENSG00000260077.1	ENST00000567540.1	1572	1	-312	6	-312	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCAGTTTGGGGTCTGGC	2121	False	NA	-5	True	AATACA	-18	NA	10040975	10039097	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_10039100_10041000
H1_mix_00051006	chr2	-	2355	12	FSM	ENSG00000115758.13	ENST00000234111.9	2476	12	0	121	0	-121	multi-exon	FALSE	canonical	3	498	junction_6	42.8231033651017	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCTGCAGAGACCATCCG	0	True	NA	NA	False	NA	NA	NA	10448327	10440088	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_10440869_10441508_10441724_10441816_10441930_10442011_10442175_10443229_10443314_10443489_10443572_10443701_10443837_10444094_10444268_10444473_10444648_10444930_10445050_10445154_10445265_10448120
H1_mix_00051007	chr2	-	3502	21	FSM	ENSG00000115761.16	ENST00000381685.10	3498	21	0	-4	0	4	multi-exon	FALSE	canonical	3	180	junction_10	27.6504520758703	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTCCAAGAAAATTTTTTT	0	True	NA	NA	False	AATAAA	-33	NA	10689975	10570749	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_10572191_10577635_10577739_10589042_10589291_10589577_10589752_10600852_10600943_10602775_10602875_10603077_10603158_10607184_10607312_10644319_10644373_10654480_10654548_10657741_10657892_10659171_10659251_10662958_10663045_10667217_10667279_10668657_10668724_10671553_10671691_10673519_10673558_10675793_10675872_10681970_10682070_10684566_10684613_10689795
H1_mix_00051009	chr2	-	2282	14	NNC	ENSG00000143870.13	novel	2509	14	NA	NA	0	26395	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	2321.8159466118	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTTTCAAGAGGGAAAAC	-5	True	NA	NA	False	AAAAAG	-8	NA	10812754	10756995	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_10757033_10783393_10784327_10784933_10785031_10787280_10787440_10788696_10788770_10788896_10788982_10789748_10789890_10790718_10790834_10791794_10791926_10793095_10793203_10797080_10797208_10797699_10797758_10802498_10802641_10812677
H1_mix_00051010	chr2	-	2292	13	FSM	ENSG00000143870.13	ENST00000272227.8	2279	13	0	-13	0	13	multi-exon	FALSE	canonical	3	7534	junction_3	656.3326297186	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTCTGAAAAAGATCTTA	25	False	10812810	-14	True	AATAAA	-29	NA	10812785	10783377	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_10784327_10784933_10785031_10787280_10787440_10788696_10788770_10788896_10788982_10789748_10789890_10790718_10790834_10791794_10791926_10793095_10793203_10797080_10797208_10797699_10797758_10802498_10802641_10812677
H1_mix_00051011	chr2	-	2524	14	FSM	ENSG00000143870.13	ENST00000540494.5	2509	14	0	-15	0	13	multi-exon	FALSE	canonical	3	8	junction_13	3047.69408418385	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTCTGAAAAAGATCTTA	NA	False	NA	-14	True	AATAAA	-29	NA	10812839	10783377	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_10784327_10784933_10785031_10787280_10787440_10788696_10788770_10788896_10788982_10789748_10789890_10790718_10790834_10791794_10791926_10793095_10793203_10797080_10797208_10797699_10797758_10802498_10802641_10810242_10810421_10812677
H1_mix_00051012	chr2	-	2432	14	FSM	ENSG00000143870.13	ENST00000381611.8	2534	14	117	-15	-28	13	multi-exon	FALSE	canonical	0	0	junction_12	3073.73449978165	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTCTGAAAAAGATCTTA	5739	False	NA	-14	True	AATAAA	-29	NA	10832368	10783377	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_10784327_10784933_10785031_10787280_10787440_10788696_10788770_10788896_10788982_10789748_10789890_10790718_10790834_10791794_10791926_10793095_10793203_10797080_10797208_10797699_10797758_10802498_10802641_10819273_10819355_10832201
H1_mix_00051014	chr2	-	3230	7	FSM	ENSG00000169016.17	ENST00000381525.8	3230	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	68.2407909945038	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGGCGTTGGGTCTCT	-1	True	NA	0	True	TATAAA	-25	NA	11466161	11444374	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_11446524_11447626_11447775_11450011_11450127_11451650_11451807_11453581_11453799_11457178_11457234_11465771
H1_mix_00051015	chr2	-	3191	6	FSM	ENSG00000169016.17	ENST00000546212.2	3191	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	85.7960372045236	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGGCGTTGGGTCTCT	NA	False	NA	0	True	TATAAA	-25	NA	11466177	11444374	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_11446524_11447626_11447775_11450011_11450127_11451650_11451807_11453581_11453799_11465771
H1_mix_00051019	chr2	-	7134	51	NIC	ENSG00000151779.13	novel	7278	52	NA	NA	13	-1	combination_of_known_splicesites	FALSE	canonical	3	12	junction_40	26.8271802469063	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGCAAGCTGCCGCTTT	2	True	NA	-29	True	AATAAA	-14	NA	15561321	15166917	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_15167324_15178987_15179117_15186741_15186881_15190263_15190404_15218772_15218969_15232421_15232512_15234544_15234748_15238467_15238687_15275483_15275819_15276850_15277102_15287072_15287184_15292536_15292767_15308215_15308354_15309170_15309248_15327749_15327871_15328198_15328313_15330597_15330766_15351991_15352082_15353552_15353711_15356302_15356417_15366579_15366694_15374607_15374721_15379601_15379832_15383214_15383318_15394226_15394350_15396412_15396476_15402167_15402302_15415545_15415720_15417526_15417713_15424314_15424469_15427710_15427795_15461200_15461338_15461686_15461792_15467328_15467408_15467663_15467805_15468381_15468534_15473221_15473348_15474066_15474325_15475686_15475881_15478225_15478290_15504144_15504214_15511211_15511351_15534542_15534642_15536417_15536552_15539222_15539357_15551492_15551537_15553425_15553474_15554060_15554139_15556782_15556820_15558579_15558635_15561187
H1_mix_00051020	chr2	-	7288	52	FSM	ENSG00000151779.13	ENST00000281513.10	7278	52	0	-10	0	8	multi-exon	FALSE	canonical	3	56	junction_38	24.2373563435063	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGCTTTTTTAACCTTTTT	-11	True	NA	-17	True	AATAAA	-26	NA	15561334	15166905	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_15167324_15178987_15179117_15186741_15186881_15190263_15190404_15218772_15218969_15232421_15232512_15234544_15234748_15238467_15238687_15275483_15275819_15276850_15277102_15287072_15287184_15292536_15292767_15308215_15308354_15309170_15309248_15327749_15327871_15328198_15328313_15330597_15330766_15351991_15352082_15353552_15353711_15356302_15356417_15366579_15366694_15374607_15374721_15379601_15379832_15383214_15383318_15394226_15394350_15396412_15396476_15402167_15402302_15415545_15415720_15417526_15417713_15424314_15424469_15427710_15427795_15461200_15461338_15461686_15461792_15467328_15467408_15467663_15467805_15468381_15468534_15473221_15473348_15474066_15474325_15475686_15475881_15478225_15478290_15488893_15489023_15504144_15504214_15511211_15511351_15534542_15534642_15536417_15536552_15539222_15539357_15551492_15551537_15553425_15553474_15554060_15554139_15556782_15556820_15558579_15558635_15561187
H1_mix_00051021	chr2	-	791	3	FSM	ENSG00000233718.9	ENST00000419083.6	776	3	6	-21	6	17	multi-exon	FALSE	canonical	3	10	junction_2	3.5	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCGGCCGAAGGCGACAC	4081	False	NA	NA	False	AATAAA	-44	NA	15941723	15939876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_15940352_15940973_15941098_15941531
H1_mix_00051022	chr2	-	642	4	FSM	ENSG00000236989.5	ENST00000412381.5	642	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	1.88561808316413	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCAGAATCTTGCAATTG	NA	False	NA	NA	False	NA	NA	NA	16105841	16085221	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_16085484_16097358_16097463_16105414_16105544_16105694
H1_mix_00051023	chr2	-	885	3	FSM	ENSG00000236989.5	ENST00000428280.1	853	3	-30	-2	-30	2	multi-exon	FALSE	canonical	1	7	junction_1	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGGCTTCAATTAACAAT	NA	False	NA	NA	False	AATAAA	-36	NA	16105692	16096423	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_16096927_16097358_16097463_16105414
H1_mix_00051024	chr2	-	4670	12	FSM	ENSG00000197872.11	ENST00000381323.7	4670	12	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_11	6.99704778359777	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACCTCTATTTTATATGA	-5	True	NA	0	True	ATTAAA	-23	NA	16665834	16549458	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_16553000_16555068_16555140_16559459_16559587_16560989_16561070_16561160_16561278_16561455_16561534_16562004_16562142_16563988_16564095_16565645_16565768_16588049_16588130_16623863_16624020_16665779
H1_mix_00051026	chr2	-	5240	28	FSM	ENSG00000163029.16	ENST00000448223.7	5240	28	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_27	76.6114311670232	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGTCATGCTTTTGTGA	3	True	NA	1	True	AATAAA	-19	NA	17753810	17663811	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_17665614_17666419_17666518_17670422_17670576_17678858_17678965_17683637_17683764_17695151_17695298_17696288_17696427_17700207_17700379_17701828_17701910_17703156_17703293_17707218_17707380_17708638_17708754_17714860_17715066_17716085_17716265_17716740_17716906_17717087_17717177_17718076_17718224_17720939_17721039_17721141_17721262_17725256_17725359_17726388_17726470_17731077_17731140_17731740_17731878_17738220_17738327_17741611_17741730_17745826_17745952_17752977_17753065_17753625
H1_mix_00051027	chr2	-	5461	27	FSM	ENSG00000163029.16	ENST00000351948.8	5173	27	20	-308	0	308	multi-exon	TRUE	canonical	3	240	junction_26	39.1884575749109	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTCTTAAATATTTTCCAA	3	True	NA	-15	True	AATATA	-42	NA	17753810	17663503	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_17665614_17666419_17666518_17670422_17670576_17678858_17678965_17683637_17683764_17695151_17695298_17696288_17696427_17700207_17700379_17701828_17701910_17703156_17703293_17707218_17707380_17708638_17708754_17714860_17715066_17716085_17716265_17716740_17716906_17717087_17717177_17718076_17718224_17720939_17721039_17721141_17721262_17725256_17725359_17726388_17726470_17731077_17731140_17731740_17731878_17738220_17738327_17741611_17741730_17745826_17745952_17753625
H1_mix_00051030	chr2	-	1565	2	FSM	ENSG00000240857.2	ENST00000381249.4	1560	2	0	-5	0	5	multi-exon	FALSE	canonical	3	305	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTTTGGAGGCTTCAC	6	True	NA	-2	True	AATAAA	-27	NA	18560653	18554717	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_18555809_18560179
H1_mix_00051034	chr2	-	6901	27	FSM	ENSG00000118965.16	ENST00000281405.9	6898	27	0	-3	0	3	multi-exon	TRUE	canonical	3	104	junction_4	14.6188255058879	265	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTTTATTCCACGTTT	5	True	NA	2	True	AATAAA	-19	NA	19990105	19910259	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_19913709_19914036_19914278_19930395_19930553_19931268_19931410_19932282_19932448_19933400_19933512_19935470_19935604_19936218_19936366_19937742_19937947_19938264_19938402_19941758_19941840_19945785_19945997_19946460_19946571_19948163_19948218_19951414_19951485_19953833_19953979_19960553_19960615_19966723_19966910_19969479_19969606_19973562_19973709_19974467_19974634_19975529_19975664_19978750_19978880_19980690_19980784_19982462_19982535_19989164_19989283_19989991
H1_mix_00051036	chr2	-	2564	8	FSM	ENSG00000132031.13	ENST00000407540.8	2557	8	0	-7	0	7	multi-exon	FALSE	canonical	3	245	junction_5	11.0711981542843	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGTTATTTTGATATT	0	True	NA	57	True	ATTAAA	-25	NA	20012668	19992044	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_19993167_19994298_19994410_19997133_19997260_20000440_20000567_20001954_20002081_20003160_20003287_20005743_20006311_20012408
H1_mix_00051037	chr2	-	1443	7	FSM	ENSG00000132031.13	ENST00000421259.2	1443	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	94.0273305421827	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGCCAATGTTCCTGCT	3	True	NA	NA	False	NA	NA	NA	20012665	19993036	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_19993167_19994298_19994410_19997133_19997260_20000440_20000567_20001954_20002081_20005743_20006311_20012408
H1_mix_00051038	chr2	-	1365	7	FSM	ENSG00000068697.7	ENST00000175091.5	1365	7	0	0	0	0	multi-exon	FALSE	canonical	3	3609	junction_3	333.62874409872	899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTGTCATTGTTTTTAAT	-4	True	NA	-17	True	AATAAA	-17	NA	20051628	20032649	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_20033280_20034316_20034416_20034966_20035063_20037315_20037439_20037537_20037615_20040890_20041012_20051409
H1_mix_00051039	chr2	-	3221	5	FSM	ENSG00000115884.11	ENST00000254351.9	3165	5	-52	-4	-52	4	multi-exon	FALSE	canonical	3	191	junction_4	14.7054411698527	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGGTGGTGGTTGAGT	770	False	NA	-4	True	AATAAA	-27	NA	20225182	20200792	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_20202936_20203086_20203223_20203812_20204292_20205342_20205425_20224801
H1_mix_00051040	chr2	-	3298	6	FSM	ENSG00000115884.11	ENST00000381150.5	3291	6	0	-7	0	5	multi-exon	FALSE	canonical	1	8	junction_5	82.8507091098199	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGTGGTGGTTGAGTC	-12	True	NA	-3	True	AATAAA	-28	NA	20225433	20200791	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_20202936_20203086_20203223_20203812_20204292_20205342_20205425_20224801_20225087_20225261
H1_mix_00051042	chr2	-	4995	8	ISM	ENSG00000055917.16	ENST00000440577.5	4352	17	47887	-1127	47887	0	3prime_fragment	FALSE	canonical	3	291	junction_2	51.627393456401	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTCTTGTGTTTTTCTC	878	False	NA	-10	True	AATAAA	-1	NA	20264369	20248736	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_20251717_20253821_20254015_20254862_20254985_20255215_20255342_20256032_20256171_20258242_20258372_20260336_20260467_20263192
H1_mix_00051043	chr2	-	6062	20	NIC	ENSG00000055917.16	novel	6309	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_8	120.391903906848	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTCTTGTGTTTTTCTC	-10	True	NA	-10	True	AATAAA	-1	NA	20350834	20248736	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_20251717_20253821_20254015_20254862_20254985_20255215_20255342_20256032_20256171_20258242_20258372_20260336_20260467_20263192_20263461_20282946_20283232_20283342_20283487_20290651_20290791_20294375_20294519_20297552_20297679_20307977_20308072_20308313_20308585_20311493_20311664_20312235_20312424_20318536_20318646_20327309_20327379_20350596
H1_mix_00051044	chr2	-	6482	23	NNC	ENSG00000055917.16	novel	6309	21	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_22	131.591717692601	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTCTTGTGTTTTTCTC	9	True	NA	-10	True	AATAAA	-1	NA	20350702	20248736	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_20251717_20253821_20254015_20254862_20254985_20255215_20255342_20256032_20256171_20258242_20258372_20260336_20260467_20263192_20263461_20278582_20278820_20282946_20283229_20283342_20283487_20290651_20290791_20294375_20294519_20297552_20297679_20307977_20308072_20308313_20308585_20311493_20311664_20312235_20312424_20318536_20318646_20327309_20327379_20331716_20331938_20332966_20333064_20350596
H1_mix_00051045	chr2	-	6309	21	FSM	ENSG00000055917.16	ENST00000361078.7	6309	21	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_20	115.238828091924	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTCTTGTGTTTTTCTC	-20	True	NA	-10	True	AATAAA	-1	NA	20350844	20248736	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_20251717_20253821_20254015_20254862_20254985_20255215_20255342_20256032_20256171_20258242_20258372_20260336_20260467_20263192_20263461_20278582_20278820_20282946_20283232_20283342_20283487_20290651_20290791_20294375_20294519_20297552_20297679_20307977_20308072_20308313_20308585_20311493_20311664_20312235_20312424_20318536_20318646_20327309_20327379_20350596
H1_mix_00051047	chr2	-	5386	22	NIC	ENSG00000055917.16	novel	6309	21	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	124.49376856975	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTATGAAAATATTTTGG	-3	True	NA	-13	True	ATTAAA	-17	NA	20350827	20249863	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_20251717_20253821_20254015_20254862_20254985_20255215_20255342_20256032_20256171_20258242_20258372_20260336_20260467_20263192_20263461_20278582_20278820_20282946_20283232_20283342_20283487_20290651_20290791_20294375_20294519_20297552_20297679_20307977_20308072_20308313_20308585_20311493_20311664_20312235_20312424_20318536_20318646_20327309_20327379_20331716_20331938_20350596
H1_mix_00051049	chr2	-	682	1	FSM	ENSG00000279307.2	ENST00000624084.2	510	1	-95	-77	-95	77	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAATGTATGAACAA	NA	False	NA	NA	False	AATAAA	-22	NA	20530071	20529389	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_20529400_20530100
H1_mix_00051051	chr2	-	2383	7	FSM	ENSG00000118960.13	ENST00000304031.8	2383	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	3.76017139089283	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCTTGGATATAATTCT	-13	True	NA	-34	True	AATAAA	-19	NA	20651098	20617817	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_20619246_20623895_20624032_20624731_20624893_20638435_20638653_20640972_20641181_20645339_20645506_20651031
H1_mix_00051053	chr2	-	4108	7	FSM	ENSG00000118961.15	ENST00000237822.8	3917	7	12	-203	0	186	multi-exon	FALSE	canonical	3	110	junction_3	24.1367631080336	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGTATGTTGCCTGGCA	-1	True	NA	NA	False	GATAAA	-20	NA	20823089	20683827	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_20687095_20701569_20701653_20739970_20740206_20774809_20774980_20790254_20790399_20801309_20801466_20823036
H1_mix_00051056	chr2	-	3774	6	FSM	ENSG00000118961.15	ENST00000435420.6	3837	6	46	17	5	0	multi-exon	FALSE	canonical	1	3	junction_4	63.7482548780749	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCTATCTCCTGCATCC	4	True	NA	-16	True	TTTAAA	-7	NA	20823084	20684030	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_20687095_20701569_20701653_20739970_20740206_20774809_20774980_20801291_20801466_20823036
H1_mix_00051058	chr2	-	851	5	NIC	ENSG00000118961.15	novel	3807	6	NA	NA	32	-37	combination_of_known_junctions	FALSE	canonical	3	19	junction_4	67.9020434154967	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGTTTGCACAAGATG	31	False	NA	NA	False	NA	NA	NA	20823057	20686661	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_20687095_20701569_20701653_20774809_20774980_20790254_20790399_20823036
H1_mix_00051060	chr2	-	1046	3	NNC	ENSG00000228999.4	novel	636	5	NA	NA	-72812	-88	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	0	33	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTCTGGGGTCAAAATT	NA	False	NA	NA	False	NA	NA	NA	22038492	21932749	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_21933548_21934966_21935095_22038372
H1_mix_00051061	chr2	-	5586	12	FSM	ENSG00000119778.15	ENST00000381024.4	5579	12	0	-7	0	0	multi-exon	FALSE	canonical	3	19	junction_7	14.8496598174576	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTCTTTAGCTTAATT	NA	False	NA	NA	False	AATAAA	-17	NA	23819855	23748663	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_23752088_23754178_23754308_23754646_23754775_23757417_23758102_23762208_23762347_23765505_23765629_23782868_23783029_23786041_23786224_23788511_23788648_23798137_23798324_23810315_23810503_23819746
H1_mix_00051062	chr2	-	8268	28	FSM	ENSG00000119778.15	ENST00000238789.10	8112	28	-57	-99	-57	99	multi-exon	FALSE	canonical	3	46	junction_7	10.7402298729081	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAGCACCCAAAAAGTCG	24	False	NA	NA	False	NA	NA	NA	23927180	23748564	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_23752088_23754178_23754308_23754646_23754775_23757417_23758102_23762208_23762347_23765505_23765629_23782868_23783029_23786026_23786224_23788511_23788648_23798137_23798324_23810315_23810503_23819746_23819883_23823257_23823570_23828848_23828940_23833918_23834079_23857414_23857504_23863380_23863556_23864808_23864925_23867834_23867947_23869662_23869762_23875828_23875905_23880638_23880756_23884764_23884874_23885726_23885830_23887831_23887986_23888349_23888400_23895818_23895971_23926554
H1_mix_00051063	chr2	-	570	2	FSM	ENSG00000119778.15	ENST00000486610.1	570	2	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGGTAAGTGTTTAGTTT	2709	False	NA	NA	False	NA	NA	NA	23755092	23754183	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_23754308_23754646
H1_mix_00051064	chr2	-	3857	4	FSM	ENSG00000163026.12	ENST00000295148.9	3848	4	0	-9	0	9	multi-exon	FALSE	canonical	3	110	junction_1	26.0810701893581	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGATGTTTTGGTAGTA	0	True	NA	-6	True	AATAAA	-24	NA	24047391	24029337	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_24031163_24032828_24032947_24037676_24039513_24047313
H1_mix_00051066	chr2	-	720	2	FSM	ENSG00000115128.7	ENST00000478050.1	720	2	0	0	0	0	multi-exon	FALSE	canonical	3	2344	junction_1	0	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAGTATAAAAGTAACA	8823	False	24076392	NA	False	AATAAA	-7	NA	24076373	24073648	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_24074195_24076199
H1_mix_00051067	chr2	-	1653	5	FSM	ENSG00000115129.14	ENST00000238721.9	1653	5	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	23.2849200127464	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGGCACGCGGACTGGGG	-3	True	NA	-5	True	AATAAA	-14	NA	24084834	24077432	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_24077762_24079443_24079641_24080818_24081032_24082884_24083153_24084188
H1_mix_00051069	chr2	-	674	3	FSM	ENSG00000115129.14	ENST00000413037.1	677	3	0	3	0	-3	multi-exon	FALSE	canonical	3	194	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCCAGTGCTGTGTATCA	21	True	NA	-6	True	AATAAA	-19	NA	24084311	24080748	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_24081032_24082884_24083153_24084188
H1_mix_00051070	chr2	-	7258	30	NNC	ENSG00000198399.16	novel	2066	17	NA	NA	-247	18037	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	11.1985645419508	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCATACAGCTTTTGGAAA	-11	True	NA	NA	False	NA	NA	NA	24360783	24184826	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_24184842_24238933_24242207_24246128_24246321_24246796_24246894_24248628_24248751_24248836_24248883_24252344_24252512_24254366_24254432_24257887_24258094_24261105_24261251_24261560_24261743_24270670_24270769_24271804_24271942_24275712_24275850_24286211_24286352_24293687_24293776_24295663_24295805_24298664_24298815_24299908_24300172_24301153_24301240_24301964_24302103_24303798_24303863_24308616_24308757_24310283_24310381_24310488_24310693_24312211_24312376_24313459_24313524_24315131_24315225_24328051_24328116_24360303
H1_mix_00051072	chr2	-	3633	4	FSM	ENSG00000198399.16	ENST00000416160.1	3634	4	0	1	0	-1	multi-exon	FALSE	canonical	3	32	junction_1	7.87400787401181	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGTTGTATTGTGTATTT	2608	False	NA	-3	True	ATTAAA	-15	NA	24248699	24238933	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_24242207_24246128_24246321_24246796_24246894_24248628
H1_mix_00051073	chr2	-	1124	2	FSM	ENSG00000184924.6	ENST00000328379.6	1120	2	38	-42	38	42	multi-exon	FALSE	canonical	3	1175	junction_1	0	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCATTTTGCTCACTGGCG	-1	True	NA	43	True	NA	NA	NA	24793353	24789685	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_24790582_24793125
H1_mix_00051075	chr2	-	4950	22	FSM	ENSG00000138031.15	ENST00000679454.1	4950	22	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_19	16.5014944695289	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTGTGGAAATTCTGTT	-12	True	NA	-4	True	ATTAAA	-20	NA	24920237	24819168	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_24820115_24820723_24820849_24821516_24821641_24822510_24822631_24823208_24823356_24824377_24824537_24826044_24826127_24827545_24827609_24827901_24828162_24830708_24830826_24831661_24831750_24834484_24834647_24834793_24834937_24836916_24837046_24838444_24838623_24839872_24840032_24841258_24841387_24841555_24841668_24842253_24842385_24872569_24872720_24918312_24919185_24919682
H1_mix_00051076	chr2	-	1636	10	ISM	ENSG00000138031.15	ENST00000260600.9	5050	21	88608	913	954	164	3prime_fragment	FALSE	canonical	3	98	junction_9	19.4618969296101	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGCTTCCGCTTTGTGAG	NA	False	NA	NA	False	AAGAAA	-21	NA	24831231	24820081	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_24820115_24820723_24820849_24821516_24821641_24822510_24822631_24823208_24823356_24824377_24824537_24826044_24826127_24827545_24827609_24827901_24828162_24830708
H1_mix_00051078	chr2	-	1867	2	Genic_Genomic	ENSG00000138031.15	novel	5050	21	NA	NA	947	-1192	multi-exon	TRUE	canonical	3	48	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATCGCGCAAGCAAGACAA	NA	False	NA	NA	False	AAAAAG	-44	NA	24831238	24828754	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr2_-_24829671_24830287
H1_mix_00051081	chr2	-	1295	4	FSM	ENSG00000115138.11	ENST00000380794.5	1295	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	96.4238329229634	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATGGATCGGAGGAGCAC	259	False	NA	61	True	AATAAA	-30	NA	25168690	25160852	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_25161753_25164640_25164793_25165635_25165686_25168497
H1_mix_00051082	chr2	-	2055	3	FSM	ENSG00000115138.11	ENST00000405623.5	1426	3	1	-630	1	568	multi-exon	FALSE	canonical	3	17	junction_2	106	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTCACAGATACGCTCAGA	47	False	NA	NA	False	NA	NA	NA	25168902	25160284	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_25161753_25164640_25164823_25168497
H1_mix_00051084	chr2	-	9430	23	FSM	ENSG00000119772.19	ENST00000321117.10	9421	23	0	-9	0	9	multi-exon	FALSE	canonical	3	31	junction_17	190.959949935422	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGTAATAATGTCGTTTTG	-16	True	NA	50	True	AATAAA	-37	NA	25341925	25227864	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_25234421_25235706_25235826_25236935_25237006_25239129_25239216_25240301_25240451_25240639_25240731_25241561_25241708_25243897_25243983_25244154_25244339_25244539_25244653_25245252_25245333_25246019_25246065_25246159_25246310_25246619_25246777_25247050_25247159_25247590_25247750_25248036_25248253_25274940_25275088_25275499_25275544_25282440_25282712_25300138_25300244_25313912_25314162_25341825
H1_mix_00051085	chr2	-	3589	19	NIC	ENSG00000119772.19	novel	3589	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_17	122.896071720964	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCCCACCTGGAGCAAATA	878	False	NA	-61	True	NA	NA	NA	25252311	25233014	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_25234421_25235706_25235826_25236935_25237006_25239129_25239216_25240301_25240451_25240639_25240731_25241561_25241708_25243897_25243983_25244154_25244339_25244539_25244653_25245252_25245333_25246019_25246065_25246159_25246310_25246619_25246777_25247050_25247159_25247590_25247750_25248036_25248253_25249617_25249725_25252193
H1_mix_00051086	chr2	-	3589	19	FSM	ENSG00000119772.19	ENST00000380746.8	3589	19	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_17	114.816224603053	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGCTTTCCTGTCTAAG	878	False	NA	-22	True	AATAAA	-18	NA	25252311	25232975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_25234421_25235706_25235826_25236935_25237006_25239129_25239216_25240301_25240451_25240639_25240731_25241561_25241708_25243897_25243983_25244154_25244339_25244539_25244653_25245252_25245333_25246019_25246065_25246159_25246310_25246619_25246777_25247050_25247159_25247590_25247750_25248036_25248253_25249656_25249725_25252193
H1_mix_00051088	chr2	-	3482	18	FSM	ENSG00000119772.19	ENST00000402667.1	2300	18	0	-1182	0	0	multi-exon	FALSE	canonical	3	218	junction_17	69.0315107828943	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCCCACCTGGAGCAAATA	878	False	NA	-61	True	NA	NA	NA	25252311	25233014	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_25234421_25235706_25235826_25236935_25237006_25239129_25239216_25240301_25240451_25240639_25240731_25241561_25241708_25243897_25243983_25244154_25244339_25244539_25244653_25245252_25245333_25246019_25246065_25246159_25246310_25246619_25246777_25247050_25247159_25247590_25247750_25248036_25248253_25252193
H1_mix_00051091	chr2	-	1715	4	ISM	ENSG00000119772.19	ENST00000321117.10	9421	23	0	53577	0	1	5prime_fragment	FALSE	canonical	3	47	junction_3	5.09901951359278	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAAGCTTTTATTCATTT	-16	True	NA	-1	True	AATACA	-16	NA	25341925	25281450	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_25282712_25300138_25300244_25313912_25314162_25341825
H1_mix_00051092	chr2	-	915	1	FSM	ENSG00000235072.2	ENST00000313031.2	1552	1	987	-350	987	350	mono-exon	FALSE	NA	NA	NA	NA	NA	563	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTTCAGCAAGCTGATTT	NA	False	NA	NA	False	AATAAA	-1	NA	25369700	25368785	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_25368800_25369700
H1_mix_00051093	chr2	-	1577	13	NIC	ENSG00000138101.20	novel	2420	20	NA	NA	250	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_8	60.5699778951769	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGTGTGTTTGTGACC	NA	False	NA	-17	True	AAAAAG	-7	NA	25596206	25377242	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_25377554_25379289_25379324_25387288_25387379_25388201_25388362_25427534_25427632_25432885_25433000_25433909_25433996_25451547_25451636_25482795_25482874_25531472_25531598_25576837_25577005_25580720_25580827_25596085
H1_mix_00051094	chr2	-	2364	19	NIC	ENSG00000138101.20	novel	2420	20	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	66.182594407209	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGCTCTTGTGTGTTTGTG	-35	True	NA	-20	True	AAAAAG	-4	NA	25673602	25377245	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_25377554_25379289_25379324_25387288_25387379_25388201_25388362_25427534_25427632_25432885_25433000_25433909_25433996_25451547_25451636_25455404_25455495_25482795_25482874_25531472_25531598_25576837_25577005_25580720_25580827_25596085_25596241_25607235_25607322_25628170_25628385_25639013_25639095_25652593_25652662_25673385
H1_mix_00051095	chr2	-	2420	20	FSM	ENSG00000138101.20	ENST00000407661.7	2420	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	94.3468287740663	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGTGTGTTTGTGACC	NA	False	NA	-17	True	AAAAAG	-7	NA	25673634	25377242	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_25377554_25379289_25379324_25387288_25387379_25388201_25388362_25419514_25419536_25427534_25427632_25432885_25433000_25433909_25433996_25451547_25451636_25455404_25455495_25482795_25482874_25531472_25531598_25576837_25577005_25580720_25580827_25596085_25596241_25607235_25607322_25628170_25628385_25639013_25639095_25652593_25652662_25673385
H1_mix_00051096	chr2	-	2466	20	FSM	ENSG00000138101.20	ENST00000288642.12	2464	20	0	-2	0	0	multi-exon	FALSE	canonical	0	0	junction_16	80.3763998383203	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGTGTGTTTGTGACC	NA	False	NA	-17	True	AAAAAG	-7	NA	25673647	25377242	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_25377554_25379289_25379324_25383835_25383890_25387288_25387379_25388201_25388362_25427534_25427632_25432885_25433000_25433909_25433996_25451547_25451636_25455404_25455495_25482795_25482874_25531472_25531598_25576837_25577005_25580720_25580827_25596085_25596241_25607235_25607322_25628170_25628385_25639013_25639095_25652593_25652662_25673385
H1_mix_00051097	chr2	-	2288	19	FSM	ENSG00000138101.20	ENST00000407186.5	2275	19	0	-13	0	0	multi-exon	FALSE	canonical	0	0	junction_15	92.546834990002	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCTTGTGTGTTTGTGA	6	True	NA	-19	True	AAAAAG	-5	NA	25673561	25377244	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_25377554_25379289_25379324_25383835_25383890_25387288_25387379_25388201_25388362_25427534_25427632_25432885_25433000_25433909_25433996_25451547_25451636_25482795_25482874_25531472_25531598_25576837_25577005_25580720_25580827_25596085_25596241_25607235_25607322_25628170_25628385_25639013_25639095_25652593_25652662_25673385
H1_mix_00051099	chr2	-	12894	12	NNC	ENSG00000143970.18	novel	8886	12	NA	NA	-50	-5	intron_retention	FALSE	non_canonical	0	0	junction_10	10.9128781304892	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAGCGACTATGCCTTTT	57	False	NA	-7	True	AATAAA	-15	NA	25878537	25733757	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_25744477_25749695_25750414_25753533_25753640_25756017_25756115_25759481_25759646_25767582_25767727_25768741_25768869_25771439_25771541_25799384_25799536_25806228_25806340_25845479_25845564_25878165
H1_mix_00051100	chr2	-	8886	12	FSM	ENSG00000143970.18	ENST00000336112.9	8886	12	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_10	8.75752333003076	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAAACCTTGGAGTT	3	True	NA	-30	True	ATTAAA	-5	NA	25878466	25737691	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_25744477_25749695_25750414_25753533_25753640_25756017_25756115_25759481_25759646_25767582_25767727_25768741_25768869_25771439_25771541_25799384_25799536_25806228_25806338_25845480_25845564_25878165
H1_mix_00051101	chr2	-	5343	8	FSM	ENSG00000084731.15	ENST00000264712.8	5342	8	0	-1	0	1	multi-exon	FALSE	canonical	3	159	junction_3	19.9550515316963	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTGCCTTACTTCTCTT	-6	True	NA	-11	True	AATAAA	-22	NA	25982497	25926596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_25929072_25929304_25929478_25929954_25930064_25951788_25951906_25954266_25954386_25955540_25955664_25956342_25956445_25980372
H1_mix_00051103	chr2	-	2944	20	FSM	ENSG00000084754.12	ENST00000380649.8	2943	20	0	-1	0	1	multi-exon	FALSE	canonical	3	829	junction_11	89.5872653692671	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTCATTGTGTGATCTTA	-11	True	NA	-19	True	ATTAAA	-21	NA	26244632	26190633	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_26191396_26191482_26191629_26192309_26192425_26193576_26193773_26194569_26194639_26195091_26195233_26197690_26197778_26201148_26201321_26204061_26204197_26209779_26209890_26212569_26212627_26214442_26214562_26215052_26215176_26230191_26230295_26232159_26232280_26234216_26234356_26236854_26236989_26238933_26239005_26239101_26239144_26244529
H1_mix_00051106	chr2	-	309	1	FSM	ENSG00000225024.1	ENST00000418887.1	292	1	0	-17	0	17	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCAATAAATGTTCTGGT	7991	False	NA	NA	False	NA	NA	NA	26678510	26678201	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_26678200_26678500
H1_mix_00051107	chr2	-	442	3	FSM	ENSG00000228474.6	ENST00000456793.2	442	3	0	0	0	0	multi-exon	FALSE	canonical	3	3781	junction_2	477.5	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTGCTGCGGAGGGAGG	-1	True	NA	-1	True	TATAAA	-30	NA	27071654	27070471	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27070722_27071325_27071464_27071600
H1_mix_00051108	chr2	-	574	2	FSM	ENSG00000228474.6	ENST00000429985.1	559	2	0	-15	0	0	multi-exon	FALSE	canonical	3	4736	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTGCTGCGGAGGGAGG	4	True	NA	-1	True	TATAAA	-30	NA	27071649	27070471	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27070722_27071325
H1_mix_00051109	chr2	-	1907	6	FSM	ENSG00000138028.17	ENST00000402394.6	1931	6	24	0	-7	0	multi-exon	FALSE	canonical	3	13	junction_5	4.92341345003647	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGTCTCACTCTAAAGC	22	True	NA	0	True	ATTAAA	-18	NA	27119104	27100593	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27101889_27102096_27102222_27102359_27102431_27102525_27102592_27104286_27104378_27118845
H1_mix_00051111	chr2	-	3050	6	FSM	ENSG00000138073.14	ENST00000468045.5	3057	6	0	7	0	2	multi-exon	FALSE	canonical	3	470	junction_1	16.9068033643264	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAAATGGTACTCTTGTC	4	True	NA	-11	True	AATAAA	-22	NA	27134629	27130762	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27131509_27131671_27132083_27132229_27132404_27132602_27132728_27132842_27132924_27133116
H1_mix_00051112	chr2	-	2127	9	FSM	ENSG00000138073.14	ENST00000260643.7	2127	9	0	0	0	0	multi-exon	FALSE	canonical	3	470	junction_1	24.3657033553312	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTACTCTTGTCAGCTGTT	-3	True	NA	-4	True	AATAAA	-29	NA	27134636	27130755	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27131509_27131671_27131832_27132009_27132083_27132229_27132404_27132602_27132728_27132842_27132924_27133116_27133338_27133531_27133722_27134286
H1_mix_00051116	chr2	-	2307	3	FSM	ENSG00000138074.15	ENST00000461757.1	2307	3	0	0	0	0	multi-exon	FALSE	canonical	3	839	junction_2	14	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGCTCCTGTACTGTCT	9732	False	NA	-1	True	AATAAA	-21	NA	27203049	27199586	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27200580_27200997_27202075_27202812
H1_mix_00051117	chr2	-	3024	17	NIC	ENSG00000138074.15	novel	3213	17	NA	NA	-23	0	intron_retention	FALSE	canonical	3	301	junction_16	139.102353839718	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGGCTCCTGTACTGT	-24	True	NA	-3	True	AATAAA	-19	NA	27211961	27199588	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_27200580_27200997_27201114_27201349_27201454_27201665_27201848_27201987_27202075_27202812_27202881_27203232_27203346_27203778_27203868_27204460_27204591_27204790_27204932_27205349_27205505_27206025_27206094_27206482_27206535_27206876_27206943_27207257_27207791_27211466_27211534_27211899
H1_mix_00051118	chr2	-	3213	17	FSM	ENSG00000138074.15	ENST00000310574.8	3213	17	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_16	179.26402272556	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGCTCCTGTACTGTCT	17	True	NA	-1	True	AATAAA	-21	NA	27212268	27199586	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27200580_27200997_27201114_27201349_27201454_27201665_27201848_27201987_27202075_27202812_27202881_27203232_27203346_27203778_27203868_27204460_27204591_27204790_27204932_27205349_27205505_27206025_27206094_27206482_27206535_27206876_27206943_27207257_27207791_27211466_27211534_27212019
H1_mix_00051119	chr2	-	2991	17	NIC	ENSG00000138074.15	novel	3213	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	282	junction_16	143.370150310307	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGCTCCTGTACTGTCT	-9	True	NA	-1	True	AATAAA	-21	NA	27211793	27199586	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_27200580_27200997_27201114_27201349_27201454_27201665_27201848_27201987_27202075_27202812_27202881_27203232_27203346_27203778_27203868_27204460_27204591_27204790_27204932_27205349_27205505_27206025_27206094_27206482_27206535_27206876_27206943_27207257_27207791_27211466_27211534_27211766
H1_mix_00051124	chr2	-	3363	8	FSM	ENSG00000115194.11	ENST00000233535.9	2936	8	-231	-196	-231	196	multi-exon	FALSE	canonical	3	66	junction_6	15.0400825008593	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAGCTACTCAGGAGGCT	1777	False	NA	10	True	AATAAA	-37	NA	27263278	27253487	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27255461_27256385_27256521_27256787_27256894_27257153_27257353_27257904_27258059_27258160_27258308_27258752_27258935_27262811
H1_mix_00051125	chr2	-	902	7	FSM	ENSG00000115204.15	ENST00000402310.5	906	7	0	4	0	-2	multi-exon	FALSE	canonical	1	2	junction_1	168.391821522174	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATCTGCAGTGGTAATGA	-18	True	NA	-9	True	ATTAAA	-11	NA	27323054	27309495	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27309982_27312213_27312247_27312493_27312590_27312679_27312773_27312993_27313110_27322447_27322523_27323051
H1_mix_00051129	chr2	-	915	8	FSM	ENSG00000115204.15	ENST00000426513.6	905	8	0	-10	0	0	multi-exon	TRUE	canonical	3	40	junction_6	153.00366808995	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTCAGTAAATATGTTAT	10	True	NA	-43	True	NA	NA	NA	27323083	27309529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27309982_27311898_27311952_27312213_27312247_27312493_27312590_27312679_27312773_27312993_27313075_27322447_27322523_27323051
H1_mix_00051131	chr2	-	3982	21	Fusion	ENSG00000115204.15_ENSG00000115207.14	novel	3882	19	NA	NA	0	31	multi-exon	FALSE	non_canonical	0	0	junction_1	140.065154481763	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGACACAGTGGCTCACG	-27	True	NA	NA	False	AAAAAG	-1	NA	27357034	27311041	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr2_-_27311075_27325857_27326894_27327176_27327285_27328036_27328190_27328467_27328597_27328843_27328932_27329120_27329283_27329378_27329524_27333654_27333785_27333973_27334000_27335597_27335707_27335916_27336029_27336197_27336426_27337243_27337343_27337480_27337559_27337925_27338021_27341947_27342234_27342825_27343148_27343307_27343579_27350313_27350390_27356738
H1_mix_00051132	chr2	-	665	8	FSM	ENSG00000115204.15	ENST00000403262.6	665	8	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	161.17552860285	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAGTGGCACTGAAGATGT	26	False	NA	NA	False	AATAAA	-27	NA	27323067	27311494	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27311678_27311898_27311952_27312213_27312247_27312493_27312590_27312679_27312773_27312993_27313110_27322447_27322523_27323051
H1_mix_00051135	chr2	-	5568	20	Fusion	ENSG00000115204.15_ENSG00000115207.14	novel	3882	19	NA	NA	3	1637	multi-exon	FALSE	canonical	3	16	junction_19	118.9884419071	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTGACATTGACTTCT	4	True	NA	NA	False	NA	NA	NA	27356764	27324211	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr2_-_27326894_27327176_27327285_27328036_27328190_27328467_27328597_27328843_27328932_27329120_27329283_27329378_27329524_27333654_27333785_27333973_27334000_27335597_27335707_27335916_27336029_27336197_27336426_27337243_27337343_27337480_27337559_27337925_27338021_27341947_27342234_27342825_27343148_27343307_27343579_27350313_27350633_27356738
H1_mix_00051136	chr2	-	3992	19	FSM	ENSG00000115207.14	ENST00000359541.6	3992	19	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_18	102.515716952193	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTACACGTCATGATTTT	515	False	NA	-7	True	ATTAAA	-24	NA	27356492	27325848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27326894_27327176_27327285_27328036_27328190_27328467_27328597_27328843_27328932_27329120_27329283_27329378_27329524_27333654_27333785_27333973_27334000_27335597_27335707_27335916_27336029_27336197_27336426_27337243_27337343_27337480_27337559_27337925_27338021_27341947_27342234_27342825_27343148_27343307_27343579_27356086
H1_mix_00051137	chr2	-	5589	19	FSM	ENSG00000115204.15_ENSG00000115207.14	ENST00000264720.7	3882	19	-150	-1557	-150	1557	multi-exon	FALSE	canonical	3	228	junction_18	57.5627676734035	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATTTGGTCTCCTATTAC	NA	False	NA	NA	False	AATATA	-15	NA	27357184	27324291	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27326894_27327176_27327285_27328036_27328190_27328467_27328597_27328843_27328932_27329120_27329283_27329378_27329524_27333654_27333785_27333973_27334000_27335597_27335707_27335916_27336029_27336197_27336426_27337243_27337343_27337480_27337559_27337925_27338021_27341947_27342234_27342825_27343148_27343307_27343579_27356738
H1_mix_00051138	chr2	-	762	5	FSM	ENSG00000115207.14	ENST00000457098.5	762	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	171.57123156287	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCTTTTACACGTCATG	6560	False	NA	-12	True	ATTAAA	-19	NA	27328850	27325853	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27326219_27327176_27327285_27328036_27328190_27328467_27328597_27328843
H1_mix_00051139	chr2	-	1859	11	ISM	ENSG00000115207.14	ENST00000359541.6	3992	19	12861	7756	-5372	2023	internal_fragment	FALSE	canonical	3	402	junction_4	38.1472148393562	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATATGCTTGTTTTTTGGT	NA	False	NA	-7	True	AATAAA	-32	NA	27343631	27333604	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_27333785_27333973_27334000_27335597_27335707_27335916_27336029_27336197_27336426_27337243_27337343_27337480_27337559_27337925_27338021_27341947_27342234_27342825_27343148_27343307
H1_mix_00051141	chr2	-	1644	13	FSM	ENSG00000115211.17	ENST00000347454.9	1644	13	0	0	0	0	multi-exon	FALSE	canonical	3	433	junction_10	99.4915895384574	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTGCCTTTGTTTCTC	-5	True	NA	-1	True	AATAAA	-25	NA	27370338	27364351	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27364600_27364717_27364899_27366758_27366937_27367073_27367202_27367456_27367560_27367745_27367823_27368024_27368140_27368371_27368464_27368653_27368734_27369005_27369213_27369413_27369550_27369875_27369920_27370283
H1_mix_00051142	chr2	-	820	2	FSM	ENSG00000115211.17	ENST00000478311.1	607	2	0	-213	0	207	multi-exon	FALSE	canonical	3	789	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACACTAAACTGGGTGTGA	5361	False	NA	NA	False	NA	NA	NA	27365082	27364144	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27364600_27364717
H1_mix_00051143	chr2	-	1971	12	FSM	ENSG00000115211.17	ENST00000493344.6	1949	12	0	-22	0	0	multi-exon	FALSE	canonical	3	433	junction_10	103.894892850085	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCATACTCCCTACCCTC	7	True	NA	-26	True	NA	NA	NA	27370326	27364376	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27364600_27364717_27364899_27366758_27366937_27367073_27367202_27367456_27367560_27367745_27367823_27368024_27368140_27368371_27368464_27368653_27368734_27369005_27369213_27369413_27369550_27369875
H1_mix_00051147	chr2	-	2077	3	FSM	ENSG00000163795.14	ENST00000407879.1	2077	3	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	14.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTCTATGCTGAATTG	5830	False	NA	-42	True	AATAAA	-16	NA	27380444	27377234	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27378372_27378466_27379055_27380092
H1_mix_00051148	chr2	-	2144	4	FSM	ENSG00000163795.14	ENST00000323703.11	2144	4	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_3	14.7044966667418	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTCTATGCTGAATTG	-2	True	NA	-42	True	AATAAA	-16	NA	27380734	27377234	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27378372_27378466_27379055_27380092_27380249_27380471
H1_mix_00051149	chr2	-	983	5	NNC	ENSG00000163795.14	novel	2144	4	NA	NA	23	-384	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	75.2744976735149	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTGACAAAGGCTTTGCC	5563	False	NA	NA	False	NA	NA	NA	27380711	27378107	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_27378372_27378466_27378619_27378883_27379055_27380092_27380249_27380471
H1_mix_00051151	chr2	-	414	1	FSM	ENSG00000213453.3	ENST00000394290.3	584	1	201	-31	201	31	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTACCTTGTCACCAAG	411	False	NA	NA	False	AATGAA	-38	NA	27393166	27392752	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27392800_27393200
H1_mix_00051152	chr2	-	1727	16	FSM	ENSG00000138002.16	ENST00000509128.5	1723	16	0	-4	0	4	multi-exon	TRUE	canonical	1	1	junction_7	15.3686549689801	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCACTGTATTCTTTGATC	790	False	NA	-9	True	ATTAAA	-18	NA	27454087	27444372	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27444522_27445013_27445106_27445295_27445450_27445744_27445844_27445928_27445989_27446259_27446356_27447514_27447658_27447811_27447923_27448914_27449032_27449293_27449381_27449498_27449563_27449690_27449801_27449997_27450097_27453383_27453514_27453629_27453740_27453981
H1_mix_00051154	chr2	-	5344	48	FSM	ENSG00000138002.16	ENST00000675690.1	5340	48	0	-4	0	4	multi-exon	TRUE	canonical	2	6	junction_33	12.7101973724889	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCACTGTATTCTTTGATC	14	True	NA	-9	True	ATTAAA	-18	NA	27489754	27444372	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27444522_27445013_27445106_27445295_27445450_27445744_27445844_27445928_27445989_27446259_27446356_27447514_27447635_27447811_27447923_27448914_27449032_27449293_27449381_27449498_27449563_27449690_27449801_27449997_27450097_27453383_27453514_27453629_27453740_27453981_27454163_27454353_27454419_27454566_27454661_27456510_27456654_27457638_27457756_27457840_27457977_27458125_27458224_27458778_27458869_27459377_27459523_27459708_27459830_27461014_27461094_27461268_27461518_27461758_27461837_27462700_27462794_27463096_27463182_27465410_27465519_27465745_27465883_27470927_27471030_27472249_27472363_27476640_27476727_27477216_27477321_27477558_27477613_27477994_27478157_27479508_27479605_27480025_27480150_27481045_27481261_27483288_27483377_27483579_27483660_27483871_27483938_27484226_27484267_27485017_27485131_27485359_27485504_27489614
H1_mix_00051155	chr2	-	1680	11	FSM	ENSG00000138002.16	ENST00000674594.1	1685	11	0	5	0	-5	multi-exon	FALSE	canonical	3	43	junction_7	5.4735728733616	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAGAAGCCTACAGCACC	4218	False	NA	NA	False	NA	NA	NA	27450659	27445295	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27445450_27445744_27445844_27445928_27445989_27446259_27446356_27447514_27447635_27447811_27447923_27448914_27449032_27449293_27449381_27449498_27449563_27449690_27449801_27449997
H1_mix_00051161	chr2	-	1832	16	FSM	ENSG00000138002.16	ENST00000511842.5	1832	16	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	8.38888153053393	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTGGCAAATAAAGCTTA	13	True	NA	-48	True	NA	NA	NA	27489678	27470812	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27471096_27472249_27472363_27476640_27476727_27477216_27477321_27477558_27477613_27477994_27478157_27479508_27479605_27480025_27480150_27481045_27481261_27483288_27483377_27483579_27483660_27483871_27483938_27484226_27484267_27485017_27485131_27485359_27485504_27489614
H1_mix_00051162	chr2	-	1667	5	FSM	ENSG00000115226.10	ENST00000491414.5	1647	5	0	-20	0	2	multi-exon	FALSE	canonical	3	42	junction_1	101.964454590803	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGTATAGTATGCTGAA	110	False	NA	-2	True	AATAAA	-22	NA	27495162	27491880	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27492479_27493388_27493479_27493929_27494467_27494546_27494704_27494877
H1_mix_00051164	chr2	-	2330	2	FSM	ENSG00000176714.10	ENST00000324364.4	2343	2	7	6	7	-6	multi-exon	FALSE	canonical	3	11	junction_1	0	196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATTACTGTTCCAATG	-8	True	NA	-6	True	AATAAA	-16	NA	27629005	27625643	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27627918_27628949
H1_mix_00051165	chr2	-	4296	6	FSM	ENSG00000119760.16	ENST00000337768.10	4296	6	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_4	32.4012345443812	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGATTCTGATTCATTAAT	4	True	NA	NA	False	ATTAAA	-28	NA	27663614	27650808	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27653748_27655364_27655603_27657344_27657670_27660983_27661389_27662178_27662282_27663328
H1_mix_00051166	chr2	-	2302	6	FSM	ENSG00000119760.16	ENST00000405491.5	2280	6	25	-47	0	36	multi-exon	FALSE	canonical	3	36	junction_4	69.7091098781214	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCCATTACTAATACCTAA	4	True	NA	26	True	NA	NA	NA	27663614	27653015	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27653748_27655364_27655603_27657344_27657670_27660983_27661602_27662178_27662282_27663328
H1_mix_00051167	chr2	-	2904	5	FSM	ENSG00000119760.16	ENST00000406540.5	2869	5	1	-36	0	36	multi-exon	FALSE	canonical	3	184	junction_4	17.6405073623181	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCCATTACTAATACCTAA	-21	True	NA	26	True	NA	NA	NA	27663639	27653015	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27653748_27655364_27655603_27657344_27657670_27660983_27662282_27663328
H1_mix_00051168	chr2	-	1233	8	FSM	ENSG00000171174.15	ENST00000302188.8	1247	8	0	14	0	-14	multi-exon	FALSE	canonical	3	29	junction_2	3.92272291935599	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTACAAACATAAAGACAAG	-13	True	NA	70	True	ATTAAA	-19	NA	27890387	27781392	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27781789_27827566_27827756_27832685_27832778_27843066_27843232_27847041_27847105_27848033_27848098_27858438_27858572_27890256
H1_mix_00051169	chr2	-	604	4	FSM	ENSG00000171174.15	ENST00000458185.1	735	4	0	131	0	-131	multi-exon	FALSE	canonical	2	3	junction_1	14.8398861930347	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTGTTTAATAATCTGG	NA	False	NA	NA	False	NA	NA	NA	27843161	27809817	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27810046_27827566_27827756_27832685_27832778_27843066
H1_mix_00051170	chr2	-	1845	7	FSM	ENSG00000171103.11	ENST00000306108.10	1844	7	0	-1	0	1	multi-exon	FALSE	canonical	3	177	junction_5	39.8148492678576	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTATCTGTCCATTTT	-18	True	NA	NA	False	AATAAA	-21	NA	28870309	28849819	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_28850243_28850327_28850406_28851071_28851299_28852407_28852500_28861117_28861309_28865016_28865120_28869578
H1_mix_00051171	chr2	-	1823	7	NNC	ENSG00000171103.11	novel	1844	7	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_6	89.0012484306946	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTATCTGTCCATTT	22	True	NA	NA	False	AATAAA	-20	NA	28870269	28849820	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_28850243_28850327_28850406_28851071_28851299_28852407_28852500_28861117_28861309_28865016_28865120_28869559
H1_mix_00051173	chr2	-	412	4	FSM	ENSG00000162949.16	ENST00000490786.1	506	4	0	94	0	-94	multi-exon	FALSE	canonical	0	0	junction_1	5.18544972870135	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCCAATCATATTTCCTT	NA	False	NA	NA	False	AATGAA	-24	NA	30732484	30729634	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_30729887_30730729_30730787_30731343_30731400_30732437
H1_mix_00051174	chr2	-	2104	1	FSM	ENSG00000230118.1	ENST00000455192.1	258	1	-1781	-65	-1781	65	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTAAAACTCGTCTGCAG	NA	False	NA	12	True	AATAAA	-37	NA	30748482	30746378	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_30746400_30748500
H1_mix_00051176	chr2	-	244	1	FSM	ENSG00000242272.1	ENST00000439142.1	405	1	164	-3	164	3	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTAGAGTCAACTGTGA	NA	False	NA	NA	False	NA	NA	NA	31823653	31823409	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_31823400_31823700
H1_mix_00051177	chr2	-	4511	9	FSM	ENSG00000162959.14	ENST00000295065.9	4505	9	0	-6	0	6	multi-exon	FALSE	canonical	3	180	junction_3	33.7814668124402	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTCTTTATTATATAGTT	455	False	NA	NA	False	TATAAA	-28	NA	32010557	31865053	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_31868493_31869847_31869953_31883385_31883463_31891991_31892135_31917925_31918038_31920797_31920911_31932066_31932136_31943301_31943384_32010186
H1_mix_00051178	chr2	-	1710	8	NIC	ENSG00000162959.14	novel	1516	10	NA	NA	-111	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_3	82.3702442806694	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTGATTTAAACTTATT	344	False	NA	NA	False	AATAAA	-19	NA	32010668	31867822	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_31868493_31869847_31869953_31883385_31883463_31917925_31918038_31920797_31920911_31932066_31932136_31943301_31943384_32010186
H1_mix_00051179	chr2	-	4574	8	FSM	ENSG00000162959.14	ENST00000426310.6	1336	8	-495	-2743	138	-175	multi-exon	FALSE	canonical	3	31	junction_6	81.5535381932429	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCACATACATGGAAATGAA	-6	True	NA	NA	False	NA	NA	NA	32010870	31865234	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_31868493_31869847_31869953_31883385_31883463_31891991_31892135_31917925_31918038_31920797_31920911_31943301_31943384_32010186
H1_mix_00051180	chr2	-	734	6	FSM	ENSG00000162961.14	ENST00000414013.5	523	6	39	-250	0	229	multi-exon	FALSE	canonical	3	76	junction_2	799.450961598021	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCCAAGATAGCCTCCTT	52	False	NA	-15	True	NA	NA	NA	32039754	32011656	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_32012053_32023421_32023475_32029593_32029737_32039278_32039327_32039420_32039493_32039732
H1_mix_00051181	chr2	-	704	6	NNC	ENSG00000162961.14	novel	688	5	NA	NA	0	-513	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	693.030273509029	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAGAGAGAGGTTTTG	13	True	NA	NA	False	NA	NA	NA	32039793	32012419	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_32012449_32023905_32024257_32029593_32029737_32039278_32039327_32039420_32039493_32039732
H1_mix_00051182	chr2	-	715	6	NNC	ENSG00000162961.14	novel	688	5	NA	NA	0	-513	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	693.030273509029	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAGAGAGAGGTTTTG	1	True	NA	NA	False	NA	NA	NA	32039805	32012419	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_32012447_32023904_32024257_32029593_32029737_32039278_32039327_32039420_32039493_32039732
H1_mix_00051184	chr2	-	688	5	FSM	ENSG00000162961.14	ENST00000342166.10	688	5	0	0	0	0	multi-exon	FALSE	canonical	3	1437	junction_4	158.368241765829	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTAAAGTAGTTTTTG	1	True	NA	-12	True	AATAAA	-15	NA	32039805	32023904	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_32024257_32029593_32029737_32039278_32039327_32039420_32039493_32039732
H1_mix_00051185	chr2	-	631	5	FSM	ENSG00000162961.14	ENST00000295066.3	631	5	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_4	714.788561394207	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTTTTGGATGTATAAGA	1	True	NA	-148	True	NA	NA	NA	32039805	32024101	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_32024257_32029593_32029737_32039278_32039327_32039420_32039493_32039592
H1_mix_00051186	chr2	-	716	1	FSM	ENSG00000272716.1	ENST00000608489.1	712	1	0	-4	0	4	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTAGCACGTGTGTTTG	-10	True	NA	NA	False	ATTAAA	-20	NA	32165757	32165041	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_32165000_32165800
H1_mix_00051188	chr2	-	277	2	ISM	ENSG00000119812.20	ENST00000685835.1	2907	5	5928	41	3659	-41	3prime_fragment	FALSE	canonical	1	2	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTAGGCTATTTTCTGA	NA	False	NA	NA	False	AATGAA	-40	NA	33563545	33555105	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_33555315_33563477
H1_mix_00051191	chr2	-	489	5	ISM	ENSG00000119812.20	ENST00000693737.1	4301	11	0	32238	0	-1057	5prime_fragment	FALSE	canonical	2	6	junction_2	332.714874179078	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGCAATTAACCAAGCCA	6	True	NA	NA	False	TTTAAA	-39	NA	33599284	33586670	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_33586679_33587239_33587321_33592079_33592215_33595488_33595638_33599168
H1_mix_00051192	chr2	-	655	3	ISM	ENSG00000119812.20	ENST00000689713.1	2482	9	-35	8237	-35	-6309	5prime_fragment	FALSE	canonical	3	756	junction_1	56	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTAGACGTGTGCACTGG	NA	False	NA	NA	False	AATAAA	-30	NA	33599382	33591922	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_33592215_33595488_33595638_33599168
H1_mix_00051194	chr2	-	384	1	FSM	ENSG00000234587.1	ENST00000431951.1	384	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAATTCAGAAGAGAAATAC	NA	False	NA	NA	False	NA	NA	NA	35725142	35724758	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_35724800_35725100
H1_mix_00051195	chr2	-	705	2	Genic_Genomic	ENSG00000260025.1	novel	366	1	NA	NA	-445	0	multi-exon	FALSE	canonical	3	45	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTCTTTGTGATAAATC	-8	True	NA	-3	True	AATAAA	-15	NA	36355559	36354748	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr2_-_36354982_36355087
H1_mix_00051196	chr2	-	1993	8	FSM	ENSG00000171055.15	ENST00000405912.8	1993	8	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	7.49149177264394	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTTTGAGAGCCTTAT	0	True	NA	-20	True	AATAAA	-19	NA	36598168	36552257	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_36553180_36555682_36555749_36558437_36558514_36578596_36578866_36581289_36581432_36583352_36583470_36590902_36591012_36597876
H1_mix_00051197	chr2	-	2076	9	FSM	ENSG00000171055.15	ENST00000379245.8	2097	9	21	0	-2	0	multi-exon	FALSE	canonical	3	9	junction_4	25.8623157315813	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTTTGAGAGCCTTAT	-2	True	NA	-20	True	AATAAA	-19	NA	36598170	36552257	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_36553180_36555682_36555749_36558437_36558514_36560784_36560866_36578596_36578866_36581289_36581432_36583352_36583470_36590902_36591012_36597876
H1_mix_00051198	chr2	-	1913	1	FSM	ENSG00000171055.15	ENST00000535666.2	1913	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGGAATAAAATGAGGGA	6615	False	NA	NA	False	NA	NA	NA	36591553	36589640	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_36589600_36591600
H1_mix_00051199	chr2	-	14320	18	FSM	ENSG00000115808.12	ENST00000263918.9	14174	18	-68	-78	-68	78	multi-exon	TRUE	canonical	3	67	junction_13	12.938502397521	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAAATTTGCAGGTGC	32	False	36966636	NA	False	ATTAAA	-24	NA	36966604	36837619	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_36849626_36849713_36849801_36850999_36851108_36855211_36855353_36857855_36858024_36861131_36861254_36867813_36867862_36869553_36869730_36877890_36878028_36883931_36884076_36886715_36886827_36893897_36894034_36899522_36899659_36902583_36902752_36905539_36905619_36916077_36916152_36925104_36925209_36966229
H1_mix_00051200	chr2	-	6921	36	FSM	ENSG00000008869.12	ENST00000233099.6	6937	36	12	4	12	-4	multi-exon	TRUE	canonical	3	42	junction_28	12.018013690341	187	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCACTAAAATGTTTAAATG	-14	True	NA	NA	False	ATTAAA	-16	NA	37084360	36980898	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_36981795_36988645_36988860_36990647_36990800_37000585_37000814_37002305_37002573_37003541_37003687_37005631_37005760_37007049_37007305_37008610_37008849_37013840_37014021_37019808_37019878_37020654_37020837_37027922_37028175_37028680_37028921_37032628_37032774_37037854_37038025_37040328_37040519_37041132_37041293_37049652_37049844_37053501_37053608_37056439_37056616_37057316_37057481_37058450_37058561_37058887_37058988_37060580_37060734_37061938_37062051_37064739_37064991_37065754_37065911_37068680_37068931_37070229_37070388_37072109_37072282_37075484_37075635_37076910_37077020_37079119_37079332_37083288_37083437_37084268
H1_mix_00051201	chr2	-	9975	17	FSM	ENSG00000055332.19	ENST00000233057.9	9975	17	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_16	17.9964189146063	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTATGTTAAAGTATTT	-14	True	NA	0	True	AATAAA	-20	NA	37156980	37099209	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_37107396_37107473_37107528_37109193_37109296_37114730_37114860_37119958_37120140_37122505_37122665_37126288_37126412_37135483_37135547_37136982_37137018_37138269_37138364_37138508_37138586_37139630_37139758_37141552_37141702_37146852_37146974_37147687_37147823_37148856_37149024_37156907
H1_mix_00051202	chr2	-	10100	17	FSM	ENSG00000055332.19	ENST00000681507.1	10103	17	3	0	3	0	multi-exon	FALSE	canonical	3	38	junction_16	26.7738649385926	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTATGTTAAAGTATTT	NA	False	NA	0	True	AATAAA	-20	NA	37157189	37099209	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_37107396_37107473_37107528_37109193_37109296_37114730_37114860_37119958_37120140_37122505_37122665_37126288_37126412_37135483_37135547_37136982_37137018_37138269_37138364_37138508_37138586_37139630_37139758_37141552_37141702_37146852_37146974_37147687_37147823_37148856_37148940_37156907
H1_mix_00051203	chr2	-	3346	16	FSM	ENSG00000115816.15	ENST00000234170.10	3346	16	0	0	0	0	multi-exon	FALSE	canonical	3	1227	junction_12	66.4989891318323	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGTGGAAGCATTGTTA	353	False	37231614	-45	True	AATAAA	-31	NA	37231596	37201611	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_37201904_37202783_37202866_37202949_37203009_37210998_37211083_37211842_37212040_37212334_37212393_37213863_37213962_37214885_37214953_37216139_37216209_37216315_37216419_37216983_37217038_37220384_37220474_37222379_37222564_37223169_37223402_37227543_37229037_37231411
H1_mix_00051204	chr2	-	611	5	FSM	ENSG00000115816.15	ENST00000489306.1	611	5	0	0	0	0	multi-exon	FALSE	canonical	3	1348	junction_3	21.2999413144731	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTAAAAAACAAAGGAAATGA	3841	False	NA	-83	True	ATTAAA	-14	NA	37212108	37201783	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_37201904_37202783_37202866_37202949_37203009_37210998_37211083_37211842
H1_mix_00051205	chr2	-	6156	19	FSM	ENSG00000115825.11	ENST00000234179.8	6156	19	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_17	46.2805454687916	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGTTGATTATCTGGAG	0	True	NA	16	True	AATAAA	-31	NA	37324833	37250501	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_37253351_37254203_37254290_37256661_37256930_37259582_37259682_37260222_37260385_37267429_37267537_37269614_37269688_37272379_37272433_37274420_37274698_37275766_37275845_37277865_37277990_37279745_37279930_37282541_37282620_37286176_37286370_37289355_37289514_37290867_37291000_37293132_37293272_37316236_37317180_37324680
H1_mix_00051207	chr2	-	2454	18	NIC	ENSG00000115825.11	novel	6156	19	NA	NA	5	-2729	combination_of_known_junctions	FALSE	canonical	3	87	junction_17	61.0906071645799	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAGCACTTCATTATGGC	30	False	37324833	NA	False	AATACA	-26	NA	37324803	37253230	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_37253351_37254203_37254290_37256661_37256930_37259582_37259682_37260222_37260385_37267429_37267537_37269614_37269688_37272379_37272433_37274420_37274698_37275766_37275845_37277865_37277990_37279745_37279930_37282541_37282620_37286176_37286370_37289355_37289514_37290867_37291000_37293132_37293272_37324680
H1_mix_00051208	chr2	-	3515	20	NNC	ENSG00000115825.11	novel	6156	19	NA	NA	0	-2729	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_19	82.9376831107452	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAGCACTTCATTATGGC	25	False	37324833	NA	False	AATACA	-26	NA	37324808	37253230	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_37253351_37254203_37254290_37256661_37256930_37259582_37259682_37260222_37260385_37267429_37267537_37269614_37269688_37272379_37272433_37274420_37274698_37275766_37275845_37277865_37277990_37279745_37279930_37282541_37282620_37286176_37286370_37289355_37289514_37290867_37291000_37293132_37293272_37316236_37317180_37317786_37317900_37324680
H1_mix_00051209	chr2	-	3309	18	NNC	ENSG00000115825.11	novel	6156	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_17	87.383456741598	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GTAAAAAAAAAAAAAAAAAA	25	False	37324833	NA	False	NA	NA	NA	37324808	37256661	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_37256930_37259582_37259682_37260222_37260385_37267429_37267537_37269614_37269688_37272379_37272433_37274420_37274698_37275766_37275845_37277865_37277990_37279745_37279930_37282541_37282620_37286176_37286370_37289355_37289514_37290867_37291000_37293132_37293272_37316236_37317180_37317786_37317900_37324680
H1_mix_00051210	chr2	-	3590	12	FSM	ENSG00000115825.11	ENST00000494667.5	4326	12	0	736	0	-736	multi-exon	FALSE	canonical	3	192	junction_11	45.2065964615383	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCTTTGGCTTCTTACCA	7810	False	NA	NA	False	NA	NA	NA	37317023	37268300	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_37269688_37272379_37272433_37274420_37274698_37275766_37275845_37277865_37277990_37279745_37279930_37282541_37282620_37286176_37286370_37289355_37289514_37290867_37291000_37293132_37293272_37316236
H1_mix_00051213	chr2	-	5218	3	FSM	ENSG00000138061.12	ENST00000610745.5	5218	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	2	182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTATTTGTCCATTCTA	0	True	NA	89	True	ATTAAA	-16	NA	38076151	38067508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_38071311_38074345_38075390_38075779
H1_mix_00051214	chr2	-	5100	3	FSM	ENSG00000119787.14	ENST00000477642.5	764	3	-354	-3982	-239	5	multi-exon	FALSE	canonical	3	484	junction_1	7	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGACCATTGGCTTTCTT	NA	False	NA	NA	False	ATTAAA	-29	NA	38300672	38293948	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_38298576_38299255_38299328_38300271
H1_mix_00051216	chr2	-	2864	13	FSM	ENSG00000119787.14	ENST00000406122.5	2864	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	188.888911356208	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAAATCTGGTCCTGTGGT	-7	True	NA	-108	True	ATTAAA	-17	NA	38377285	38295153	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_38296591_38296685_38296701_38298143_38298576_38299255_38299328_38300271_38300329_38309378_38309507_38310308_38310448_38313150_38313244_38314607_38314665_38315283_38315335_38318534_38318640_38318884_38319020_38377142
H1_mix_00051220	chr2	-	4197	14	FSM	ENSG00000143889.16	ENST00000409636.5	3980	14	14	-231	14	222	multi-exon	FALSE	non_canonical	0	0	junction_9	204.980126039101	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTATCAGTGATACTTTCT	281	False	NA	NA	False	NA	NA	NA	38603015	38561746	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_38564238_38568198_38568298_38568385_38568444_38569132_38569335_38569803_38569926_38573209_38573428_38577460_38577533_38581912_38581986_38582071_38582169_38583840_38583927_38585643_38585882_38591529_38591649_38602437_38602601_38602856
H1_mix_00051221	chr2	-	2219	15	NIC	ENSG00000143889.16	novel	3980	14	NA	NA	21	-192	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_10	258.811066933675	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTGAATTTTAAGTACTA	10	True	NA	NA	False	AATGAA	-21	NA	38602907	38563699	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_38564238_38568198_38568298_38568385_38568444_38569132_38569335_38569803_38569926_38573209_38573428_38577460_38577533_38577919_38578003_38581912_38581986_38582071_38582169_38583840_38583927_38585643_38585882_38591529_38591649_38602437_38602601_38602856
H1_mix_00051222	chr2	-	1687	7	FSM	ENSG00000143889.16	ENST00000410076.5	1687	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	264.603739370571	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTTGCTGCATTGTTTA	-12	True	NA	-2	True	AATAAA	-16	NA	38602929	38581074	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_38581986_38582071_38582169_38583840_38583927_38585643_38585882_38591529_38591649_38602437_38602601_38602856
H1_mix_00051224	chr2	-	2863	9	FSM	ENSG00000115875.19	ENST00000425778.5	2857	9	0	-6	0	4	multi-exon	FALSE	canonical	3	101	junction_6	843.879869634891	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATACTTAATTTTTGGAAGT	NA	False	NA	NA	False	AATAAA	-27	NA	38751415	38743594	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_38745188_38746143_38746180_38746693_38746748_38748046_38748158_38748578_38748654_38748897_38749347_38749528_38749706_38750013_38750195_38751228
H1_mix_00051225	chr2	-	2418	7	FSM	ENSG00000115875.19	ENST00000446327.6	2453	7	35	0	35	0	multi-exon	FALSE	canonical	3	375	junction_1	663.387623406473	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGATACTTAATTTTTGG	NA	False	NA	NA	False	AATAAA	-23	NA	38751459	38743598	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_38745188_38746693_38746748_38748046_38748158_38748578_38748654_38749528_38749706_38750013_38750195_38751228
H1_mix_00051226	chr2	-	1944	9	FSM	ENSG00000115875.19	ENST00000425941.6	1944	9	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_6	941.666740412976	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCATAGTGTTAATTAGGAC	-4	True	NA	NA	False	NA	NA	NA	38751363	38744452	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_38745188_38746143_38746180_38746693_38746748_38748055_38748158_38748578_38748654_38748897_38749347_38749528_38749706_38750013_38750195_38751228
H1_mix_00051228	chr2	-	1050	8	FSM	ENSG00000115875.19	ENST00000409276.5	1050	8	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_3	691.848337751114	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGATTTGTGTTCAATA	1	True	NA	29	True	AATAAA	-16	NA	38751358	38744892	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_38745188_38746143_38746180_38746693_38746748_38748055_38748158_38748578_38748654_38749528_38749706_38750013_38750195_38751228
H1_mix_00051229	chr2	-	1903	7	FSM	ENSG00000115875.19	ENST00000443213.5	1903	7	0	0	0	0	multi-exon	FALSE	canonical	3	1787	junction_1	195.45218227371	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAATAAAATGTTTCTAA	7	True	NA	4	True	NA	NA	NA	38751352	38744917	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_38745188_38746143_38746180_38746693_38746748_38748046_38748158_38748578_38749706_38750013_38750195_38751228
H1_mix_00051230	chr2	-	2566	14	FSM	ENSG00000163214.21	ENST00000452978.5	2559	14	0	-7	0	0	multi-exon	TRUE	canonical	3	19	junction_2	37.7815270599568	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAATGAGTTCTCTTTTGG	NA	False	NA	-5	True	ATTAAA	-17	NA	38848402	38797728	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_38798443_38802714_38802916_38813820_38813896_38815520_38815656_38818876_38818961_38819048_38819145_38822992_38823270_38825846_38826048_38826515_38826690_38828339_38828437_38837830_38837948_38843004_38843211_38847018_38847074_38848268
H1_mix_00051232	chr2	-	987	1	FSM	ENSG00000223922.1	ENST00000439895.1	1223	1	426	-190	426	190	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGGGAGCTATAAAATGACA	NA	False	NA	NA	False	NA	NA	NA	38811228	38810241	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_38810200_38811200
H1_mix_00051234	chr2	-	8906	23	FSM	ENSG00000115904.15	ENST00000402219.8	8906	23	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	15.440969973386	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATTATTTTTGCATGTA	-18	True	NA	2	True	AATAAA	-26	NA	39121051	38981548	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_38986316_38987472_38987592_38989269_38989315_38995122_38995388_38996921_38997039_38997252_38997426_39006411_39006530_39007030_39007194_39010583_39010704_39012125_39012349_39013459_39013564_39013866_39013990_39014764_39014847_39022569_39023226_39024009_39024138_39035211_39035311_39035389_39035501_39051143_39051288_39054613_39054824_39056701_39056867_39058672_39058805_39067627_39067754_39120335
H1_mix_00051235	chr2	-	8861	22	FSM	ENSG00000115904.15	ENST00000395038.6	4123	22	-601	-4137	0	0	multi-exon	FALSE	canonical	3	34	junction_2	11.7104136070453	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATTATTTTTGCATGTA	-18	True	NA	2	True	AATAAA	-26	NA	39121051	38981548	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_38986316_38987472_38987592_38995122_38995388_38996921_38997039_38997252_38997426_39006411_39006530_39007030_39007194_39010583_39010704_39012125_39012349_39013459_39013564_39013866_39013990_39014764_39014847_39022569_39023226_39024009_39024138_39035211_39035311_39035389_39035501_39051143_39051288_39054613_39054824_39056701_39056867_39058672_39058805_39067627_39067754_39120335
H1_mix_00051238	chr2	-	4335	34	FSM	ENSG00000011566.15	ENST00000263881.8	4335	34	0	0	0	0	multi-exon	TRUE	canonical	3	191	junction_19	36.8486592898582	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTCATCTGGTTTAATC	-3	True	NA	1	True	AATAAA	-30	NA	39437285	39249265	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_39250706_39251829_39251886_39254449_39254521_39258347_39258441_39258518_39258588_39260605_39260778_39265202_39265307_39267188_39267248_39272282_39272401_39272481_39272543_39278406_39278487_39280271_39280357_39282512_39282555_39286851_39286965_39288120_39288281_39290291_39290335_39292772_39292827_39293229_39293269_39299742_39299802_39307942_39308006_39309460_39309520_39315309_39315389_39325517_39325629_39325729_39325812_39325898_39325962_39326145_39326278_39331916_39331990_39333531_39333575_39336919_39336968_39337525_39337582_39343387_39343453_39356248_39356340_39378065_39378124_39436891
H1_mix_00051239	chr2	-	470	7	FSM	ENSG00000011566.15	ENST00000497566.5	528	7	58	0	58	0	multi-exon	FALSE	canonical	3	97	junction_5	70.4059656563277	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTCCCATGTCAGGGAG	NA	False	NA	NA	False	NA	NA	NA	39315459	39288214	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_39288281_39290291_39290335_39292772_39292827_39293229_39293269_39299742_39299802_39309460_39309520_39315309
H1_mix_00051240	chr2	-	500	4	FSM	ENSG00000011566.15	ENST00000437968.1	500	4	0	0	0	0	multi-exon	FALSE	canonical	1	21	junction_3	128.972865363223	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTCTGTCAGAACTGCAAA	54	False	NA	NA	False	NA	NA	NA	39437228	39337574	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_39337582_39343387_39343453_39356248_39356340_39436891
H1_mix_00051241	chr2	-	3148	8	FSM	ENSG00000138050.15	ENST00000460072.5	3148	8	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	66.2176374556212	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCTCTGGTTTAATGTT	9236	False	NA	NA	False	AAAAAG	-23	NA	39770013	39736059	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_39737060_39744369_39744479_39755294_39755410_39755888_39755961_39757247_39757369_39761330_39761419_39766056_39766110_39768423
H1_mix_00051243	chr2	-	2312	11	FSM	ENSG00000138050.15	ENST00000378727.8	2089	11	115	-338	0	91	multi-exon	FALSE	canonical	3	43	junction_5	61.4748729156881	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTAATTTTCCACCCTGTG	97	False	NA	NA	False	NA	NA	NA	39779152	39735968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_39737060_39744369_39744479_39755294_39755410_39755888_39755961_39757247_39757369_39761330_39761419_39766056_39766110_39768423_39768502_39769709_39770120_39771504_39771641_39779113
H1_mix_00051244	chr2	-	1980	10	NIC	ENSG00000138050.15	novel	2205	10	NA	NA	14	-95	combination_of_known_junctions	FALSE	canonical	3	31	junction_8	54.0379382048584	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATACACTGTCACCTCGC	111	False	NA	NA	False	AATGAA	-23	NA	39779138	39736155	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_39737060_39744369_39744479_39755294_39755410_39755888_39755961_39761330_39761419_39766056_39766110_39768423_39768502_39769709_39770120_39771514_39771641_39779113
H1_mix_00051246	chr2	-	2814	7	FSM	ENSG00000183023.18	ENST00000406391.2	2814	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	2.11476292340825	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAACTATCAGATATAGTA	NA	False	NA	NA	False	CATAAA	-11	NA	40430280	40115252	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_40115630_40139400_40139677_40160764_40160865_40164853_40164985_40174824_40174843_40177751_40177856_40428472
H1_mix_00051247	chr2	-	418	1	FSM	ENSG00000236533.1	ENST00000414823.1	399	1	0	-19	0	19	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACACACACACACACAAAGAA	NA	False	NA	NA	False	AATAAA	-11	NA	41850601	41850183	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_41850200_41850600
H1_mix_00051248	chr2	-	374	3	FSM	ENSG00000234362.6	ENST00000436551.2	974	3	572	28	128	-28	multi-exon	FALSE	canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACCCAAAATAGAGTCATAA	1285	False	NA	NA	False	CATAAA	-18	NA	41933337	41931627	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_41931870_41932162_41932233_41933275
H1_mix_00051249	chr2	-	2277	3	FSM	ENSG00000115944.15	ENST00000234301.3	2282	3	0	5	0	-5	multi-exon	FALSE	canonical	3	1696	junction_1	52	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGACTGGCTTCTCTCAGT	-5	True	NA	NA	False	TATAAA	-25	NA	42361217	42349342	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_42351360_42353211_42353344_42361089
H1_mix_00051251	chr2	-	4976	2	FSM	ENSG00000171126.8	ENST00000306078.2	3709	2	-584	-683	-584	683	multi-exon	FALSE	canonical	3	8	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGCAGTTTTGAACTCC	448	False	NA	NA	False	NA	NA	NA	42494566	42441333	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_42444580_42492836
H1_mix_00051252	chr2	-	3671	2	FSM	ENSG00000171126.8	ENST00000394973.4	3656	2	0	-15	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACTGGTACTGGGACCG	3	True	NA	-10	True	AATAAA	-18	NA	42493977	42442016	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_42444580_42492869
H1_mix_00051253	chr2	-	4320	1	FSM	ENSG00000162881.6	ENST00000378661.3	1781	1	-2539	0	-2539	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGTCTTTAATTCTAAC	6132	False	NA	3	True	AATAAA	-36	NA	42766800	42762480	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_42762500_42766800
H1_mix_00051254	chr2	-	1099	9	NIC	ENSG00000162882.15	novel	1256	10	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	2	18	junction_3	12.5772612281053	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACACCTGGGGGTCTGCCGC	4	True	NA	-4	True	AATAAA	-17	NA	42792574	42767090	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_42767516_42767594_42767678_42767859_42767929_42770142_42770187_42770492_42770583_42783313_42783421_42783783_42783868_42788528_42788608_42792456
H1_mix_00051255	chr2	-	1254	10	FSM	ENSG00000162882.15	ENST00000294973.11	1256	10	0	2	0	-2	multi-exon	FALSE	canonical	2	26	junction_2	10.361371757222	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACACCTGGGGGTCTGCCGC	-5	True	NA	-4	True	AATAAA	-17	NA	42792583	42767090	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_42767516_42767594_42767678_42767859_42767929_42769712_42769859_42770142_42770187_42770492_42770583_42783313_42783421_42783783_42783868_42788528_42788608_42792456
H1_mix_00051256	chr2	-	716	5	FSM	ENSG00000162882.15	ENST00000406924.6	1103	5	0	387	0	-387	multi-exon	FALSE	canonical	3	43	junction_2	7.15891053163818	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCGTGAGTGTGGTGTAT	-15	True	NA	NA	False	NA	NA	NA	42792593	42770273	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_42770583_42783313_42783421_42783783_42783868_42788528_42788608_42792456
H1_mix_00051257	chr2	-	3732	1	Genic_Genomic	ENSG00000226491.1	novel	NA	NA	NA	NA	-3255	-1011	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCTCAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	42801967	42798235	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr2_-_42798200_42802000
H1_mix_00051258	chr2	-	3878	2	FSM	ENSG00000152518.8	ENST00000282388.4	3693	2	0	-185	0	185	multi-exon	FALSE	canonical	3	1315	junction_1	0	197	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAAGTAATTATTTGG	-3	True	NA	NA	False	NA	NA	NA	43226606	43222216	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_43225753_43226264
H1_mix_00051261	chr2	-	6344	38	FSM	ENSG00000115970.19	ENST00000405006.8	6310	38	-33	-1	0	0	multi-exon	TRUE	canonical	3	7	junction_37	17.9880651935756	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGCCTCCCCTACTTCT	18	True	NA	-15	True	CATAAA	-19	NA	43596007	43230850	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_43231344_43232712_43232883_43279764_43279897_43286907_43287062_43291695_43291769_43292103_43292223_43292833_43293214_43320445_43320541_43344121_43344238_43397970_43398140_43428099_43428232_43430212_43430303_43485233_43485326_43498832_43498956_43505621_43505736_43508647_43508781_43527878_43527989_43541158_43541317_43549209_43549369_43551788_43551926_43552203_43552340_43556344_43556556_43560233_43560386_43566697_43566822_43570387_43570511_43571706_43571863_43572813_43572993_43574335_43575028_43577021_43577243_43578512_43578608_43581740_43581929_43586400_43586450_43586701_43586735_43586853_43587003_43590823_43590955_43591951_43592047_43592316_43592417_43595646
H1_mix_00051262	chr2	-	3370	20	ISM	ENSG00000115970.19	ENST00000405975.7	6091	38	15	318212	0	3005	5prime_fragment	FALSE	canonical	3	71	junction_19	11.3871677790266	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTGGGTTTAGGAATG	2	True	NA	1	True	AATAAA	-26	NA	43596023	43549062	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_43549369_43551788_43551926_43552203_43552340_43556344_43556556_43560233_43560386_43566697_43566822_43570387_43570511_43571706_43571863_43572813_43572993_43574335_43575028_43577021_43577243_43578512_43578608_43581740_43581929_43586400_43586450_43586701_43586735_43586853_43587003_43590823_43590955_43591951_43592047_43592316_43592417_43595930
H1_mix_00051263	chr2	-	2981	17	FSM	ENSG00000115970.19	ENST00000402360.6	2974	17	4	-11	0	11	multi-exon	FALSE	canonical	3	82	junction_9	10.5741429912783	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTTATGTCTCACATG	3609	False	NA	NA	False	AATAAA	-37	NA	43592416	43552056	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_43552340_43556344_43556556_43560233_43560386_43566697_43566822_43570387_43570511_43571706_43571863_43572813_43572993_43574335_43575028_43577021_43577243_43578512_43578608_43581740_43581929_43586400_43586450_43586701_43586735_43586853_43587003_43590823_43590955_43591951_43592047_43592316
H1_mix_00051264	chr2	-	6603	38	FSM	ENSG00000138095.20	ENST00000260665.12	6603	38	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	215.081070892455	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGCTGCTGCTGCTTTT	15	False	43996004	0	True	AATAAA	-17	NA	43995989	43886223	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_43888657_43889733_43889877_43894544_43894630_43896633_43896709_43899218_43899335_43899465_43899606_43901319_43901525_43905691_43905781_43912431_43912559_43918024_43918134_43918255_43918399_43925066_43925158_43925892_43925962_43934189_43934297_43934753_43934879_43943686_43943895_43945331_43945418_43946112_43946244_43947256_43947371_43947730_43947776_43948121_43948200_43948411_43948519_43949601_43949660_43950572_43950601_43957384_43957452_43960540_43960635_43963587_43963707_43973606_43973715_43973794_43973901_43974149_43974296_43974613_43974759_43975090_43975218_43976142_43976230_43976993_43977053_43977154_43977277_43979825_43979949_43982237_43982435_43995798
H1_mix_00051265	chr2	-	5062	38	FSM	ENSG00000138095.20	ENST00000682546.1	5052	38	0	-10	0	0	multi-exon	FALSE	canonical	0	0	junction_9	276.734788507331	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCTCATGCCTGTTAAT	-1	True	NA	-9	True	AATAAA	-15	NA	43995974	43887746	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_43888657_43889733_43889877_43894544_43894630_43896633_43896709_43899218_43899335_43899465_43899606_43901319_43901525_43905691_43905781_43912431_43912559_43918024_43918134_43918255_43918399_43925066_43925158_43925892_43925962_43934189_43934297_43934753_43934879_43943686_43943895_43945331_43945418_43946112_43946244_43947256_43947371_43947730_43947776_43948121_43948200_43948411_43948516_43949601_43949660_43950572_43950601_43957384_43957452_43960540_43960635_43963587_43963707_43973606_43973715_43973794_43973901_43974149_43974296_43974613_43974759_43975090_43975218_43976142_43976230_43976993_43977053_43977154_43977277_43979825_43979949_43982237_43982435_43995798
H1_mix_00051266	chr2	-	5019	38	FSM	ENSG00000138095.20	ENST00000683994.1	5019	38	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	276.34905833979	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATATTGAATCTCATGCC	-15	True	NA	-16	True	AATAAA	-8	NA	43995988	43887753	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_43888657_43889733_43889877_43894544_43894630_43896633_43896656_43899218_43899335_43899465_43899606_43901319_43901525_43905691_43905781_43912431_43912559_43918024_43918134_43918255_43918399_43925066_43925158_43925892_43925962_43934189_43934297_43934753_43934879_43943686_43943895_43945331_43945418_43946112_43946244_43947256_43947371_43947730_43947776_43948121_43948200_43948411_43948519_43949601_43949660_43950572_43950601_43957384_43957452_43960540_43960635_43963587_43963707_43973606_43973715_43973794_43973901_43974149_43974296_43974613_43974759_43975090_43975218_43976142_43976230_43976993_43977053_43977154_43977277_43979825_43979949_43982237_43982435_43995798
H1_mix_00051267	chr2	-	5152	38	FSM	ENSG00000138095.20	ENST00000684619.1	5142	38	0	-10	0	0	multi-exon	FALSE	canonical	0	0	junction_9	278.51823566292	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCTCATGCCTGTTAAT	NA	False	NA	-9	True	AATAAA	-15	NA	43996036	43887746	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_43888657_43889733_43889877_43894544_43894630_43896633_43896709_43899218_43899335_43899465_43899606_43901319_43901525_43905691_43905781_43912431_43912559_43918024_43918134_43918255_43918399_43925066_43925158_43925892_43925962_43934189_43934297_43934753_43934879_43943686_43943895_43945331_43945418_43946112_43946244_43947256_43947371_43947730_43947776_43948121_43948200_43948411_43948519_43949601_43949660_43950572_43950601_43957384_43957452_43960540_43960635_43963587_43963707_43973606_43973715_43973794_43973901_43974149_43974296_43974613_43974759_43975090_43975218_43976142_43976230_43976993_43977053_43977154_43977277_43979825_43979949_43982237_43982435_43995773
H1_mix_00051271	chr2	-	7257	24	FSM	ENSG00000138095.20	ENST00000684743.1	7255	24	0	-2	0	0	multi-exon	FALSE	canonical	0	0	junction_8	253.18062919957	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCACTTATTAGTCTGCT	NA	False	NA	-12	True	ATTAAA	-20	NA	43960064	43888272	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_43888657_43889733_43889877_43894544_43894630_43896633_43896709_43899218_43899335_43899465_43901525_43905691_43905781_43912431_43912559_43918024_43918134_43918255_43918399_43925066_43925158_43925892_43925962_43934189_43934297_43934753_43934879_43943686_43943895_43945331_43945418_43946112_43946244_43947256_43947371_43947730_43947776_43948121_43948200_43948411_43948519_43949601_43949660_43950572_43950601_43957384
H1_mix_00051273	chr2	-	3735	5	FSM	ENSG00000138095.20	ENST00000682434.1	3735	5	0	0	0	0	multi-exon	FALSE	canonical	3	1148	junction_4	69.4316210382561	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGAAATAACCAGGCGATA	NA	False	NA	-39	True	AAGAAA	-18	NA	43900725	43888604	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_43888657_43889733_43889877_43894544_43896709_43899218_43899335_43899465
H1_mix_00051276	chr2	-	6739	32	FSM	ENSG00000138095.20	ENST00000683802.1	6739	32	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	220.278959456386	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCCTACAGGTAATGACC	NA	False	NA	NA	False	NA	NA	NA	43982419	43899229	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_43899335_43899465_43899606_43901319_43901525_43905691_43905781_43912431_43912559_43918024_43918134_43918255_43918399_43925066_43925158_43925892_43925962_43934189_43934297_43934753_43934879_43943686_43943895_43945331_43945418_43946112_43946244_43947256_43947371_43947730_43947776_43948121_43948200_43948411_43948519_43949601_43949660_43950572_43950601_43957384_43960635_43963587_43963707_43973606_43973715_43973794_43973901_43974149_43974296_43974613_43974759_43975090_43975218_43976142_43976230_43976993_43977053_43977154_43977277_43979825_43979949_43982237
H1_mix_00051277	chr2	-	2811	24	FSM	ENSG00000138095.20	ENST00000447246.2	2789	24	0	-22	0	22	multi-exon	FALSE	canonical	3	27	junction_1	243.207186056902	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGAAATAATTCCTTTGC	10	False	43996004	NA	False	AATACA	-10	NA	43995994	43942543	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_43942804_43943686_43943895_43945331_43945418_43946112_43946244_43947256_43947371_43947730_43947776_43948121_43948200_43948411_43948519_43949601_43949660_43950572_43950601_43957384_43957452_43960540_43960635_43963587_43963707_43973606_43973715_43973794_43973901_43974149_43974296_43974613_43974759_43975090_43975218_43976142_43976230_43976993_43977053_43977154_43977277_43979825_43979949_43982237_43982435_43995798
H1_mix_00051281	chr2	-	5829	14	FSM	ENSG00000138078.16	ENST00000409411.6	5829	14	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_13	47.1748604197331	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTTTCTCAATGTCTAG	-1	True	NA	NA	False	ATTAAA	-19	NA	44361494	44317606	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44361379
H1_mix_00051282	chr2	-	6022	14	FSM	ENSG00000138078.16	ENST00000541738.5	6049	14	31	-4	-18	0	multi-exon	FALSE	canonical	3	39	junction_13	52.2456645804762	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTTTCTCAATGTCTAG	NA	False	NA	NA	False	ATTAAA	-19	NA	44361831	44317606	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44361523
H1_mix_00051283	chr2	-	5215	15	FSM	ENSG00000138078.16	ENST00000409936.5	5212	15	0	-3	0	0	multi-exon	FALSE	canonical	3	19	junction_14	64.0376164963267	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTAATTTTATTTTTT	-1	True	NA	-7	True	ATTAAA	-16	NA	44361494	44318762	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44359496_44360039_44361379
H1_mix_00051285	chr2	-	6164	15	NIC	ENSG00000138078.16	novel	5212	15	NA	NA	0	0	intron_retention	FALSE	canonical	2	2	junction_14	67.552738278915	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTAATTTTATTTTTT	-18	True	NA	-7	True	ATTAAA	-16	NA	44361805	44318762	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44359496_44360677_44361379
H1_mix_00051287	chr2	-	3080	15	FSM	ENSG00000138078.16	ENST00000410081.5	3080	15	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_14	58.6938181217944	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCGTTAAAGTTTTTGAATA	-19	True	NA	-124	True	GATAAA	-17	NA	44361806	44320921	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44359496_44359751_44361379
H1_mix_00051289	chr2	-	910	2	FSM	ENSG00000259439.3	ENST00000432125.2	910	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCATCAGTATGGTTGGA	6991	False	NA	NA	False	NA	NA	NA	44935644	44923034	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_44923580_44935279
H1_mix_00051291	chr2	-	2334	3	FSM	ENSG00000250565.7	ENST00000505245.6	2334	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	7	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATCTGTGACACTGAAG	2100	False	NA	NA	False	NA	NA	NA	46542002	46534299	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_46535928_46536610_46536704_46541389
H1_mix_00051294	chr2	-	1061	7	FSM	ENSG00000151665.13	ENST00000306465.8	1061	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	141.106835018325	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCTTCAGATGCTGCT	-6	True	NA	NA	False	AATAAA	-15	NA	46617051	46581284	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_46581592_46588074_46588180_46592474_46592584_46612227_46612345_46613693_46613786_46614936_46615186_46616969
H1_mix_00051295	chr2	-	4124	4	FSM	ENSG00000180398.13	ENST00000319466.9	4120	4	0	-4	0	0	multi-exon	FALSE	canonical	3	595	junction_3	57.0048730860402	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAGTTGATTTTGTTCAC	-26	True	NA	-1	True	AATAAA	-20	NA	46915806	46901869	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_46905595_46907809_46907970_46909022_46909178_46915722
H1_mix_00051296	chr2	-	3979	3	FSM	ENSG00000180398.13	ENST00000409913.5	3975	3	0	-4	0	0	multi-exon	FALSE	canonical	3	90	junction_2	319.5	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAGTTGATTTTGTTCAC	237	False	NA	-1	True	AATAAA	-20	NA	46915816	46901869	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_46905595_46907809_46907970_46915722
H1_mix_00051297	chr2	-	1113	4	FSM	ENSG00000180398.13	ENST00000409207.5	1113	4	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	329.08053725494	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGGGTCTCTCCCACAA	-2	True	NA	NA	False	NA	NA	NA	46941732	46904957	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_46905595_46907809_46907970_46909022_46909178_46941571
H1_mix_00051300	chr2	-	1218	6	FSM	ENSG00000143933.20	ENST00000272298.12	1210	6	0	-8	0	8	multi-exon	FALSE	canonical	3	9554	junction_1	684.268777601317	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATAATTTTTTCTCGTGTG	1	True	NA	0	True	AATAAA	-32	NA	47176511	47160075	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_47160805_47161722_47161859_47162285_47162393_47162518_47162663_47170733_47170765_47176440
H1_mix_00051301	chr2	-	4502	5	FSM	ENSG00000143933.20	ENST00000460218.5	4502	5	0	0	0	0	multi-exon	FALSE	canonical	3	9554	junction_1	479.202723281077	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGCTCTGCATCTGAGT	2305	False	NA	-12	True	AATAAA	-20	NA	47174207	47160163	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_47160805_47161722_47161859_47162285_47162393_47162518_47162663_47170733
H1_mix_00051302	chr2	-	1165	7	FSM	ENSG00000143933.20	ENST00000456319.6	1165	7	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_6	4782.40425646162	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACAATTTACCCAATGGT	-4	True	NA	23	True	AATAAA	-4	NA	47176516	47160179	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_47160805_47161722_47161859_47162285_47162393_47162518_47162663_47170733_47170765_47172413_47172460_47176440
H1_mix_00051303	chr2	-	1926	5	FSM	ENSG00000143933.20	ENST00000670593.1	1926	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	4354.60483281778	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATATTTGTTTTCCAATA	7761	False	NA	-2	True	NA	NA	NA	47164219	47160204	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_47160805_47161722_47161859_47162285_47162393_47162518_47163543_47164160
H1_mix_00051304	chr2	-	1294	6	FSM	ENSG00000143933.20	ENST00000656538.1	1294	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	4117.76752136397	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATATTTGTTTTCCAATA	1	True	NA	-2	True	NA	NA	NA	47176511	47160204	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_47160805_47161722_47161859_47162285_47162393_47162518_47162663_47170733_47170765_47176235
H1_mix_00051306	chr2	-	1891	4	FSM	ENSG00000143933.20	ENST00000482532.5	1891	4	0	0	0	0	multi-exon	FALSE	canonical	3	9554	junction_1	346.185242640732	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTTATTTTAGAAAATTG	8017	False	NA	NA	False	NA	NA	NA	47163963	47160601	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_47160805_47161722_47161859_47162285_47162393_47162518
H1_mix_00051307	chr2	-	1063	4	FSM	ENSG00000234690.7	ENST00000413185.2	1046	4	0	-17	0	17	multi-exon	TRUE	canonical	2	7	junction_2	1.24721912892465	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACTTGAATCATCCCTAA	7	True	NA	NA	False	AATAAA	-18	NA	47344989	47331362	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_47332108_47332272_47332409_47332933_47333027_47344900
H1_mix_00051308	chr2	-	13347	2	FSM	ENSG00000184261.5	ENST00000327876.5	13564	2	0	217	0	-217	multi-exon	FALSE	canonical	3	689	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCCAGCCAGCTAATGCT	-36	True	NA	NA	False	NA	NA	NA	47570985	47509506	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_47521809_47569940
H1_mix_00051309	chr2	-	531	1	FSM	ENSG00000230979.3	ENST00000456046.1	531	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCAGGGCCCTCGCCCGGG	37	False	NA	-61	True	NA	NA	NA	47691246	47690715	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_47690700_47691200
H1_mix_00051311	chr2	-	3416	18	ISM	ENSG00000138081.22	ENST00000403359.8	4760	23	-26	5929	-26	0	5prime_fragment	FALSE	canonical	3	128	junction_17	31.7610019627017	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTTCAACTGTGTTTGT	-29	True	NA	-8	True	AGTAAA	-19	NA	47906524	47812848	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_47813378_47813790_47813868_47818778_47818865_47818955_47819079_47820361_47820457_47822217_47822304_47823142_47823361_47832348_47832487_47832571_47832679_47832768_47832881_47832963_47833071_47834578_47834712_47834787_47834872_47835871_47836002_47838858_47839004_47839418_47839501_47839641_47839770_47905488
H1_mix_00051313	chr2	-	2722	10	FSM	ENSG00000170820.12	ENST00000406846.7	2762	10	12	28	12	-28	multi-exon	FALSE	canonical	0	0	junction_9	2.0245407953654	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCAGATTTCCCTTCCTC	14	False	NA	NA	False	AATACA	-2	NA	49154503	48962184	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_48963967_48968697_48968884_48982911_48982987_48983097_48983167_48988976_48989055_48990565_48990638_49017488_49017564_49020085_49020161_49068218_49068291_49154265
H1_mix_00051314	chr2	-	5622	7	FSM	ENSG00000179915.25	ENST00000401710.5	2873	7	44	-2793	32	-9	multi-exon	FALSE	canonical	2	11	junction_1	6.69369520934107	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATCACATACTCGTTACT	6	True	NA	NA	False	ATTAAA	-8	NA	50347722	49918513	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_49922252_49943703_49943792_50053270_50053591_50054954_50055045_50091322_50091495_50236788_50236971_50346690
H1_mix_00051317	chr2	-	1340	5	FSM	ENSG00000179915.25	ENST00000462791.2	1676	5	0	336	0	-37	multi-exon	FALSE	canonical	3	10	junction_4	3.20156211871642	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTACCTCTCTGAGTAT	668	False	NA	NA	False	NA	NA	NA	50506967	50465441	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_50465562_50472297_50472472_50495904_50496096_50497332_50497715_50506494
H1_mix_00051320	chr2	-	2230	10	FSM	ENSG00000115239.24	ENST00000263634.8	2226	10	0	-4	0	4	multi-exon	FALSE	canonical	3	186	junction_3	25.6851785094386	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGCTTTTTTTTTTTTTTT	-1	True	NA	-1	True	ATTAAA	-20	NA	53786953	53669975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_53670691_53693883_53694015_53700270_53700529_53714383_53714582_53716565_53716744_53728711_53728848_53729457_53729571_53750782_53750942_53765376_53765586_53786820
H1_mix_00051321	chr2	-	7268	47	FSM	ENSG00000068878.15	ENST00000404125.6	7250	47	0	-18	0	18	multi-exon	TRUE	canonical	3	35	junction_42	51.0730971024575	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAGAGGAGAAGACAGTT	0	True	NA	14	True	AATAAA	-33	NA	53970993	53864050	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_53865574_53866084_53866224_53866746_53866881_53869375_53869539_53874338_53874495_53875626_53875756_53885689_53885776_53887258_53887468_53887857_53887990_53888720_53888813_53890103_53890209_53892807_53892961_53893673_53893800_53895006_53895077_53895582_53895737_53896803_53896886_53897869_53898000_53898300_53898355_53899880_53900018_53901349_53901560_53904024_53904157_53906597_53906694_53906805_53906869_53908319_53908419_53908509_53908566_53908783_53908841_53910074_53910131_53919150_53919247_53920192_53920351_53920888_53921105_53922516_53922585_53923048_53923119_53923320_53923420_53925538_53925690_53925958_53926024_53927393_53927484_53928116_53928304_53931834_53932101_53932667_53932761_53934604_53934728_53936086_53936162_53936763_53936828_53937390_53937541_53939955_53940001_53948420_53948538_53949142_53949284_53970542
H1_mix_00051322	chr2	-	3082	3	FSM	ENSG00000068878.15	ENST00000488687.5	3073	3	0	-9	0	0	multi-exon	FALSE	canonical	3	219	junction_1	2	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGCTGTTTTTTCCCTG	6285	False	NA	-34	True	AATAAA	-23	NA	53870960	53864860	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_53866224_53866746_53866881_53869375
H1_mix_00051323	chr2	-	2265	8	NNC	ENSG00000115310.19	novel	4697	9	NA	NA	0	49253	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	488.888451865399	290	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTATACCCTTTGACCAAC	0	True	NA	NA	False	NA	NA	NA	55050451	54922933	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_54922959_54972188_54973199_54973562_54973622_54973820_54973868_54974694_54974765_54982514_54982654_54987490_54987699_55049744
H1_mix_00051325	chr2	-	2335	7	FSM	ENSG00000115310.19	ENST00000317610.11	2333	7	0	-2	0	0	multi-exon	FALSE	canonical	3	1136	junction_6	126.399828586382	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGGTATTTTCATTTC	-11	True	NA	-3	True	AATAAA	-19	NA	55050544	54972186	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_54973199_54973562_54973622_54973820_54973868_54974694_54974765_54982514_54982654_54987490_54987699_55049744
H1_mix_00051326	chr2	-	2392	8	FSM	ENSG00000115310.19	ENST00000357732.8	2390	8	0	-2	0	0	multi-exon	FALSE	canonical	0	0	junction_6	610.243511114328	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGGTATTTTCATTTC	-11	True	NA	-3	True	AATAAA	-19	NA	55050544	54972186	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_54973199_54973562_54973622_54973820_54973868_54974694_54974765_54982514_54982654_54987490_54987699_55028163_55028221_55049744
H1_mix_00051331	chr2	-	2536	16	FSM	ENSG00000085760.15	ENST00000263629.9	2536	16	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_13	27.0871843415951	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCACTACTACTGGCCAAAA	0	True	NA	24	True	ATTAAA	-42	NA	55269231	55236594	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_55236821_55237287_55237429_55240010_55240176_55242939_55243081_55243415_55243669_55244028_55244234_55246336_55246462_55249394_55249535_55252476_55252654_55254040_55254202_55254653_55254826_55262315_55262428_55263639_55263866_55267568_55267636_55268577_55268740_55269168
H1_mix_00051333	chr2	-	583	4	FSM	ENSG00000085760.15	ENST00000441307.5	583	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	62.4624331543013	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGGTAGTTACAGATT	-2	True	NA	NA	False	GGGGCT	-30	NA	55269347	55263646	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_55263866_55267568_55267636_55268577_55268740_55269212
H1_mix_00051334	chr2	-	8890	32	FSM	ENSG00000115355.18	ENST00000643413.1	8881	32	0	-9	0	3	multi-exon	FALSE	canonical	3	14	junction_16	27.9722621640138	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTAGTAATCATTTAAAAAT	862	False	NA	-31	True	AATAAA	-28	NA	55419079	55287838	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_55291165_55291675_55291776_55295596_55296057_55296257_55296524_55299838_55299920_55301205_55301278_55301871_55302073_55308808_55309024_55309161_55309255_55312433_55312580_55315927_55316115_55317205_55317350_55317563_55317842_55318842_55319005_55322527_55322693_55328293_55328433_55332565_55332694_55334093_55335165_55336680_55336819_55339463_55339649_55343647_55343793_55344367_55344515_55346174_55346334_55349517_55349600_55355578_55355752_55362307_55362449_55363949_55364034_55372451_55372511_55374813_55374884_55388777_55388887_55418815_55418917_55419016
H1_mix_00051335	chr2	-	9787	33	FSM	ENSG00000115355.18	ENST00000436346.7	9751	33	61	-97	0	97	multi-exon	TRUE	canonical	3	44	junction_22	24.662408134649	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGTTTAGTTGATTCTG	146	False	NA	63	True	NA	NA	NA	55419795	55287744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_55291165_55291675_55291776_55295596_55296057_55296257_55296524_55299838_55299920_55301205_55301278_55301871_55302073_55303068_55303153_55308808_55309024_55309161_55309255_55312433_55312580_55315927_55316115_55317205_55317350_55317563_55317842_55318842_55319005_55322527_55322693_55328293_55328436_55332565_55332694_55334093_55335165_55336680_55336819_55339463_55339649_55343647_55343793_55344367_55344515_55346174_55346334_55349517_55349600_55355578_55355752_55362307_55362449_55363949_55364034_55372451_55372511_55374813_55374884_55388777_55388887_55418815_55418917_55419016
H1_mix_00051336	chr2	-	9700	32	FSM	ENSG00000115355.18	ENST00000263630.13	9699	32	0	-1	0	1	multi-exon	FALSE	canonical	3	43	junction_7	25.7293202171093	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTTAGTAATCATTTAAAA	-32	True	NA	-33	True	AATAAA	-26	NA	55419888	55287840	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_55291165_55291675_55291776_55295596_55296057_55296257_55296524_55299838_55299920_55301205_55301278_55301871_55302073_55308808_55309024_55309161_55309255_55312433_55312580_55315927_55316115_55317205_55317350_55317563_55317842_55318842_55319005_55322527_55322693_55328293_55328436_55332565_55332694_55334093_55335165_55336680_55336819_55339463_55339649_55343647_55343793_55344367_55344515_55346174_55346334_55349517_55349600_55355578_55355752_55362307_55362449_55363949_55364034_55372451_55372511_55374813_55374884_55388777_55388887_55418815_55418917_55419016
H1_mix_00051338	chr2	-	2008	3	FSM	ENSG00000115355.18	ENST00000643103.1	2008	3	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCATGTGTTGATACTTT	2188	False	NA	NA	False	NA	NA	NA	55296684	55290654	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_55291776_55295596_55296057_55296257
H1_mix_00051340	chr2	-	8326	31	ISM	ENSG00000115355.18	ENST00000436346.7	9751	33	31	5726	9	-15	5prime_fragment	FALSE	canonical	3	44	junction_20	23.8877932565289	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCCTAATGAAATTTGT	31	True	NA	-44	True	AAGAAA	-15	NA	55419825	55293567	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_55296057_55296257_55296524_55299838_55299920_55301205_55301278_55301871_55302073_55303068_55303153_55308808_55309024_55309161_55309255_55312433_55312580_55315927_55316115_55317205_55317350_55317563_55317842_55318842_55319005_55322527_55322693_55328293_55328436_55332565_55332694_55334093_55335165_55336680_55336819_55339463_55339649_55343647_55343793_55344367_55344515_55346174_55346334_55349517_55349600_55355578_55355752_55362307_55362449_55363949_55364034_55372451_55372511_55374813_55374884_55388777_55388887_55418815_55418917_55419016
H1_mix_00051343	chr2	-	4310	16	FSM	ENSG00000275052.5	ENST00000616288.4	4310	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	94.6019497097649	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGATGTTTGTGTTTGG	3	True	NA	NA	False	ATTAAA	-20	NA	55617608	55548377	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_55550007_55558774_55558969_55564312_55564498_55564901_55565042_55568193_55568364_55573618_55573778_55577314_55577357_55579678_55579782_55581566_55581699_55585050_55585168_55586617_55586735_55588878_55588957_55598415_55599040_55603977_55604077_55615450_55615507_55617143
H1_mix_00051344	chr2	-	4549	28	FSM	ENSG00000138035.15	ENST00000447944.7	4549	28	0	0	0	0	multi-exon	FALSE	canonical	2	265	junction_9	47.0959094970893	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCGACTATTATTTAATAA	-7	True	NA	0	True	ATTAAA	-23	NA	55693844	55634060	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_55636393_55637551_55637600_55640626_55640706_55643157_55643214_55643318_55643426_55644636_55644721_55645348_55645433_55646258_55646323_55646414_55646487_55647346_55647454_55654899_55654954_55656130_55656221_55656304_55656372_55660156_55660194_55661955_55662027_55666990_55667094_55667861_55667959_55671318_55671377_55671994_55672047_55672892_55673080_55679681_55679796_55680711_55680760_55680854_55680919_55683784_55683835_55684942_55685049_55686369_55686445_55687644_55687706_55693662
H1_mix_00051345	chr2	-	4522	28	NNC	ENSG00000138035.15	novel	3308	29	NA	NA	0	-2	intron_retention	FALSE	canonical	2	64	junction_26	78.2427372088038	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATCGACTATTATTTAAT	14	True	NA	-2	True	ATTAAA	-21	NA	55693823	55634062	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_55636393_55637551_55637600_55640626_55640706_55643157_55643214_55643318_55643426_55644636_55644721_55645348_55645433_55646258_55646323_55646414_55646487_55647346_55647454_55654899_55654954_55656130_55656221_55656304_55656372_55660156_55660194_55661955_55662027_55666990_55667094_55667861_55667959_55671318_55671377_55671994_55672047_55672892_55673080_55679681_55679796_55680711_55680760_55680854_55680919_55683784_55683835_55684942_55685049_55686369_55686441_55687644_55687706_55693662
H1_mix_00051346	chr2	-	1281	9	FSM	ENSG00000138035.15	ENST00000481066.1	1281	9	0	0	0	0	multi-exon	FALSE	canonical	2	265	junction_8	58.5329768164921	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCGATGGAAGAATGAGGC	NA	False	NA	NA	False	NA	NA	NA	55647382	55636369	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_55636393_55637551_55637600_55640626_55640706_55643157_55643214_55643318_55643426_55644636_55645433_55646258_55646323_55646414_55646487_55647346
H1_mix_00051348	chr2	-	2721	11	FSM	ENSG00000115380.20	ENST00000394555.6	3024	11	303	0	-39	0	multi-exon	FALSE	canonical	3	48	junction_2	10.2610915598683	230	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTATCTTTGGAGGTTTTT	281	False	NA	-5	True	AATAAA	-25	NA	55923836	55865966	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_55867235_55870719_55870916_55870999_55871124_55874945_55875066_55876622_55876743_55877745_55877866_55881611_55881735_55917664_55918052_55918218_55918268_55922359_55922448_55923710
H1_mix_00051350	chr2	-	1738	15	NNC	ENSG00000115392.12	novel	1658	14	NA	NA	0	7506	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	192.558565170205	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAAGCATAGAAGCAT	-25	True	NA	NA	False	NA	NA	NA	58241372	58151736	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_58151766_58159242_58159801_58160107_58160180_58161521_58161639_58162865_58162948_58163028_58163075_58163433_58163518_58165723_58165875_58198593_58198663_58204129_58204227_58221941_58222043_58226727_58226785_58229813_58229875_58232053_58232113_58241217
H1_mix_00051351	chr2	-	1576	13	FSM	ENSG00000115392.12	ENST00000403295.7	1576	13	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	204.459449932417	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGCGTGTTATTTTTC	24	True	NA	-5	True	AATAAA	-18	NA	58241323	58159242	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_58159801_58160107_58160180_58161521_58161639_58162865_58162948_58163028_58163075_58165723_58165875_58198593_58198663_58204129_58204227_58221941_58222043_58226727_58226785_58229813_58229875_58232053_58232113_58241217
H1_mix_00051352	chr2	-	1662	14	FSM	ENSG00000115392.12	ENST00000233741.9	1658	14	0	-4	0	0	multi-exon	FALSE	canonical	3	581	junction_7	74.1994752688826	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGCGTGTTATTTTTC	22	True	NA	-5	True	AATAAA	-18	NA	58241325	58159242	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_58159801_58160107_58160180_58161521_58161639_58162865_58162948_58163028_58163075_58163433_58163518_58165723_58165875_58198593_58198663_58204129_58204227_58221941_58222043_58226727_58226785_58229813_58229875_58232053_58232113_58241217
H1_mix_00051353	chr2	-	1702	14	FSM	ENSG00000115392.12	ENST00000402135.7	1698	14	0	-4	0	0	multi-exon	FALSE	canonical	3	168	junction_7	157.516600045649	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGCGTGTTATTTTTC	-3	True	NA	-5	True	AATAAA	-18	NA	58241350	58159242	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_58159801_58160107_58160180_58161521_58161639_58162865_58162948_58163028_58163075_58163433_58163518_58165723_58165875_58198578_58198663_58204129_58204227_58221941_58222043_58226727_58226785_58229813_58229875_58232053_58232113_58241217
H1_mix_00051354	chr2	-	849	10	FSM	ENSG00000115392.12	ENST00000403676.5	849	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_9	216.47889299216	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACATTTCGGTGAAGAGCT	45	False	NA	NA	False	NA	NA	NA	58241302	58159754	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_58159801_58160107_58160180_58161521_58161639_58162865_58162948_58163028_58163075_58163433_58163518_58165723_58165875_58198593_58198663_58204129_58204227_58241217
H1_mix_00051356	chr2	-	534	6	FSM	ENSG00000115392.12	ENST00000481670.2	522	6	0	-12	0	12	multi-exon	FALSE	canonical	3	14	junction_1	293.757314802542	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGGATTGTGAGAAGCC	88	False	NA	8	True	AATAAA	-28	NA	58241259	58213492	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_58213707_58221941_58222043_58226727_58226785_58229813_58229875_58232053_58232113_58241217
H1_mix_00051357	chr2	-	1977	1	FSM	ENSG00000231043.3	ENST00000434096.1	1741	1	15	-251	15	251	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCTGAAGAGCTATACT	NA	False	NA	NA	False	NA	NA	NA	58462017	58460040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_58460000_58462000
H1_mix_00051358	chr2	-	1519	5	FSM	ENSG00000119866.22	ENST00000489516.7	1519	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	192.213423048444	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGGATTTGAATTTGTC	4525	False	NA	NA	False	AATATA	-18	NA	60550925	60451780	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_60452667_60462281_60462425_60468731_60468834_60545970_60546301_60550867
H1_mix_00051359	chr2	-	3641	5	FSM	ENSG00000119866.22	ENST00000356842.9	4052	5	0	411	0	224	multi-exon	FALSE	canonical	3	71	junction_1	167.772725733356	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGGAGGAAAGAAGTTCACA	1879	False	NA	NA	False	NA	NA	NA	60553571	60451556	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_60452667_60460681_60462425_60468731_60468834_60545970_60546301_60553215
H1_mix_00051360	chr2	-	2104	5	FSM	ENSG00000119866.22	ENST00000359629.10	2494	5	0	390	0	224	multi-exon	FALSE	canonical	3	74	junction_1	166.477475953956	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGGAGGAAAGAAGTTCACA	7	True	NA	NA	False	NA	NA	NA	60553634	60451556	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_60452667_60462281_60462425_60468731_60468834_60545970_60546301_60553215
H1_mix_00051361	chr2	-	3082	5	NIC	ENSG00000119866.22	novel	4052	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	18	junction_1	190.663971426172	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGTGTTTGCTTGTTCTT	1989	False	NA	-7	True	AATAAA	-14	NA	60553461	60452157	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_60452667_60460529_60462425_60468731_60468834_60545970_60546301_60553215
H1_mix_00051362	chr2	-	5920	4	FSM	ENSG00000119866.22	ENST00000642384.2	6102	4	193	-11	0	11	multi-exon	FALSE	canonical	3	440	junction_2	14.7271480229163	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGTCCTCATTTGACA	1989	False	NA	NA	False	AATAAA	-27	NA	60553461	60457182	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_60462425_60468731_60468834_60545970_60546301_60553215
H1_mix_00051363	chr2	-	5519	3	FSM	ENSG00000119866.22	ENST00000335712.11	5519	3	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	197	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAACCAATGTTTTGC	-17	True	NA	NA	False	AGTAAA	-29	NA	60553658	60457678	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_60462425_60545970_60546301_60553215
H1_mix_00051365	chr2	-	1385	3	FSM	ENSG00000119866.22	ENST00000643004.1	1379	3	0	-6	0	6	multi-exon	FALSE	canonical	3	5	junction_1	235.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTAGTCGGTGTTGTTTC	1989	False	NA	7	True	AATAAA	-35	NA	60553461	60522074	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_60522884_60545970_60546301_60553215
H1_mix_00051366	chr2	-	6003	2	FSM	ENSG00000119866.22	ENST00000642180.1	6003	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTTGCATAAGTCTTTTG	9167	False	NA	NA	False	ATTAAA	-44	NA	60546283	60532859	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_60538550_60545970
H1_mix_00051367	chr2	-	5684	2	FSM	ENSG00000119866.22	ENST00000643716.1	4874	2	171	-981	0	920	multi-exon	FALSE	canonical	3	476	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCACACCTTTCTCTTAG	1989	False	NA	NA	False	TATAAA	-16	NA	60553461	60540862	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_60546301_60553215
H1_mix_00051369	chr2	-	1227	3	FSM	ENSG00000162927.14	ENST00000398658.2	1227	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	4.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGAAAGATTTTTTC	-6	True	NA	-8	True	AATAAA	-16	NA	61017193	61009847	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61010889_61011764_61011906_61017148
H1_mix_00051370	chr2	-	2551	2	FSM	ENSG00000212978.6	ENST00000420918.3	2532	2	0	-19	0	19	multi-exon	FALSE	canonical	3	48	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTCAAAGGGTACTCAGAC	-9	True	NA	-5	True	AATAAA	-36	NA	61144950	61141572	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61143946_61144772
H1_mix_00051371	chr2	-	4309	26	FSM	ENSG00000115464.15	ENST00000411912.5	4309	26	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	31.1461073009132	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTACATACGTTGCTT	6570	False	NA	-9	True	ATTAAA	-21	NA	61241614	61187462	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61188710_61188909_61189070_61190270_61190415_61190517_61190659_61192900_61192981_61204496_61204602_61206016_61206125_61206759_61206887_61208898_61208978_61211771_61211930_61214059_61214695_61220309_61220458_61221501_61221607_61222618_61222664_61223059_61223165_61223247_61223297_61227066_61227219_61228644_61228720_61228826_61228996_61229547_61229634_61232451_61232533_61235844_61235911_61236025_61236074_61236160_61236237_61236324_61236390_61241559
H1_mix_00051372	chr2	-	10541	79	NIC	ENSG00000115464.15	novel	11675	80	NA	NA	-92	227	intron_retention	FALSE	canonical	1	1	junction_15	180.176033891002	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATCTCTCAGTTGTGGCC	-27	True	NA	NA	False	NA	NA	NA	61470782	61188246	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_61188710_61188909_61189070_61190270_61190415_61190517_61190659_61192900_61192981_61203139_61203264_61204255_61204381_61204496_61204602_61206016_61206125_61206759_61206887_61208898_61208978_61211771_61211930_61214059_61214695_61220309_61220458_61221501_61221607_61223059_61223165_61223247_61223297_61227066_61227219_61228644_61228720_61228826_61228996_61229547_61229634_61232451_61232533_61235844_61235911_61236025_61236074_61236160_61236237_61236324_61236390_61241559_61241656_61241765_61241820_61245209_61245289_61246323_61246478_61248510_61248684_61256383_61256479_61256872_61256951_61257051_61257109_61257203_61257351_61259710_61259777_61265396_61265558_61265983_61266168_61278164_61278286_61278387_61278444_61280243_61280349_61281089_61281243_61283144_61283270_61283408_61283450_61284874_61284958_61288676_61288878_61293463_61293551_61294948_61295033_61295167_61295291_61296799_61296926_61300950_61301161_61301353_61301455_61311539_61311688_61311783_61311911_61314584_61314745_61314874_61314975_61317653_61317768_61319172_61319328_61325374_61325458_61331275_61331372_61333881_61333972_61339350_61339479_61339565_61339682_61343814_61344030_61347869_61348481_61348755_61348887_61349249_61349286_61350259_61350390_61350567_61350694_61370320_61370414_61370497_61370580_61378362_61378425_61380168_61380362_61383268_61383337_61394852_61395003_61395182_61395234_61405707_61406129_61420745_61420834_61470649
H1_mix_00051373	chr2	-	11675	80	FSM	ENSG00000115464.15	ENST00000398571.7	11675	80	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_65	178.552399764396	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTACATACGTTGCTT	-4	True	NA	-9	True	ATTAAA	-21	NA	61471087	61187462	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61188710_61188909_61189070_61190270_61190415_61190517_61190659_61192900_61192981_61203139_61203264_61204255_61204381_61204496_61204602_61206016_61206125_61206759_61206887_61208898_61208978_61211771_61211930_61214059_61214695_61220309_61220458_61221501_61221607_61222618_61222664_61223059_61223165_61223247_61223297_61227066_61227219_61228644_61228720_61228826_61228996_61229547_61229634_61232451_61232533_61235844_61235911_61236025_61236074_61236160_61236237_61236324_61236390_61241559_61241656_61241765_61241820_61245209_61245289_61246323_61246478_61248510_61248684_61256383_61256479_61256872_61256951_61257051_61257109_61257203_61257351_61259710_61259777_61265396_61265558_61265983_61266168_61278164_61278286_61278387_61278444_61280243_61280349_61281089_61281243_61283144_61283270_61283408_61283450_61284874_61284958_61288676_61288878_61293463_61293551_61294948_61295033_61295167_61295291_61296799_61296926_61300950_61301161_61301353_61301455_61311539_61311688_61311783_61311911_61314584_61314745_61314874_61314975_61317653_61317768_61319172_61319328_61325374_61325458_61331275_61331372_61333881_61333972_61339350_61339479_61339565_61339682_61343814_61344030_61347869_61348481_61348755_61348887_61349249_61349286_61350259_61350390_61350567_61350694_61370320_61370414_61370497_61370580_61378362_61378425_61380168_61380362_61383268_61383337_61394852_61395003_61395182_61395234_61405707_61406129_61420745_61420834_61470649
H1_mix_00051374	chr2	-	1793	2	FSM	ENSG00000115464.15	ENST00000490552.1	1793	2	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAGAAAAAATTAAGCC	2015	False	NA	NA	False	NA	NA	NA	61191349	61189453	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61190415_61190517
H1_mix_00051375	chr2	-	348	2	FSM	ENSG00000115464.15	ENST00000492882.1	348	2	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGCTAATGTGTATTTTAC	2398	False	NA	NA	False	AATAAA	-21	NA	61266039	61265265	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61265558_61265983
H1_mix_00051377	chr2	-	8930	16	FSM	ENSG00000082898.19	ENST00000678113.1	8930	16	0	0	0	0	multi-exon	FALSE	canonical	1	410	junction_15	276.21807809531	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGGCAGGAGGATCACC	448	False	NA	NA	False	NA	NA	NA	61500128	61476031	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61495614_61496878_61498914_61499712
H1_mix_00051378	chr2	-	3602	12	FSM	ENSG00000082898.19	ENST00000469337.2	3602	12	0	0	0	0	multi-exon	FALSE	canonical	3	1334	junction_8	97.0743091018592	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTGTCTAACTCTACT	7189	False	NA	-86	True	NA	NA	NA	61493387	61477688	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566
H1_mix_00051379	chr2	-	4613	19	FSM	ENSG00000082898.19	ENST00000677476.1	4613	19	0	0	0	0	multi-exon	FALSE	canonical	1	410	junction_18	270.137465006245	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTGTCTAACTCTACT	8	False	NA	-86	True	NA	NA	NA	61500568	61477688	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712
H1_mix_00051381	chr2	-	5126	22	FSM	ENSG00000082898.19	ENST00000677190.1	5126	22	0	0	0	0	multi-exon	FALSE	canonical	1	410	junction_18	255.887553252004	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTGTCTAACTCTACT	3629	False	NA	-86	True	NA	NA	NA	61523690	61477688	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610
H1_mix_00051382	chr2	-	4417	25	FSM	ENSG00000082898.19	ENST00000680228.1	4417	25	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_23	424.960676285335	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTGTCTAACTCTACT	4707	False	NA	-86	True	NA	NA	NA	61533903	61477688	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61525269_61525334_61526419_61526522_61533771
H1_mix_00051383	chr2	-	4696	24	FSM	ENSG00000082898.19	ENST00000677933.1	4696	24	0	0	0	0	multi-exon	FALSE	canonical	1	410	junction_18	247.470767401599	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTGTCTAACTCTACT	4364	False	NA	-86	True	NA	NA	NA	61534246	61477688	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771
H1_mix_00051385	chr2	-	5801	25	FSM	ENSG00000082898.19	ENST00000676667.1	5801	25	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_24	351.130493212835	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTGTCTAACTCTACT	2740	False	NA	-86	True	NA	NA	NA	61535870	61477688	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61534422
H1_mix_00051387	chr2	-	4452	25	FSM	ENSG00000082898.19	ENST00000677417.1	4452	25	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_24	351.564677153752	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTGTCTAACTCTACT	1493	False	NA	-86	True	NA	NA	NA	61537117	61477688	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61537018
H1_mix_00051388	chr2	-	4291	21	FSM	ENSG00000082898.19	ENST00000677422.1	4291	21	0	0	0	0	multi-exon	FALSE	canonical	2	181	junction_17	300.84020259932	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTGTCTAACTCTACT	894	False	NA	-86	True	NA	NA	NA	61537716	61477688	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498914_61522610_61522684_61526419_61526522_61533771_61533904_61537561
H1_mix_00051389	chr2	-	4437	24	FSM	ENSG00000082898.19	ENST00000678081.1	4437	24	0	0	0	0	multi-exon	FALSE	canonical	1	39	junction_8	352.621722806586	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTGTCTAACTCTACT	830	False	NA	-86	True	NA	NA	NA	61537780	61477688	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61537561
H1_mix_00051390	chr2	-	4594	27	FSM	ENSG00000082898.19	ENST00000677928.1	4594	27	0	0	0	0	multi-exon	FALSE	canonical	1	21	junction_24	462.867918589279	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTGTCTAACTCTACT	2	True	NA	-86	True	NA	NA	NA	61538231	61477688	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61534557_61534679_61537561_61537588_61538137
H1_mix_00051391	chr2	-	4440	25	FSM	ENSG00000082898.19	ENST00000676771.1	4440	25	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_24	423.300275530136	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTGTCTAACTCTACT	94	False	NA	-86	True	NA	NA	NA	61538516	61477688	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61537561_61537669_61538491
H1_mix_00051392	chr2	-	4500	26	FSM	ENSG00000082898.19	ENST00000677814.1	4500	26	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_25	345.041618359293	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTGTCTAACTCTACT	79	False	NA	-86	True	NA	NA	NA	61538531	61477688	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61537561_61537669_61538491
H1_mix_00051393	chr2	-	4594	25	FSM	ENSG00000082898.19	ENST00000676553.1	4603	25	9	0	9	0	multi-exon	FALSE	canonical	1	15	junction_24	349.542667479793	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTGTCTAACTCTACT	NA	False	NA	-86	True	NA	NA	NA	61538732	61477688	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61538491
H1_mix_00051394	chr2	-	4988	25	FSM	ENSG00000082898.19	ENST00000401558.7	4988	25	0	0	0	0	multi-exon	FALSE	canonical	1	410	junction_18	245.697801622689	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACCCCTTGATTTACAAAC	-11	True	NA	71	True	AATGAA	-4	NA	61538356	61477848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61537561
H1_mix_00051395	chr2	-	4194	24	FSM	ENSG00000082898.19	ENST00000676789.1	4184	24	0	-10	0	0	multi-exon	FALSE	canonical	0	0	junction_1	352.359806011199	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTACTTAAAAAGCAAAATAA	830	False	NA	29	True	NA	NA	NA	61537780	61477969	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61478967_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61537561
H1_mix_00051398	chr2	-	3777	7	FSM	ENSG00000170264.13	ENST00000404929.6	3777	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	20.6612896230823	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTTTTTATATACTTAC	-19	True	NA	1	True	AATAAA	-25	NA	61854060	61824847	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61826600_61827103_61827259_61836009_61836110_61838537_61838706_61839420_61840582_61842121_61842361_61853858
H1_mix_00051399	chr2	-	3692	6	FSM	ENSG00000170264.13	ENST00000405894.3	3684	6	0	-8	0	0	multi-exon	FALSE	canonical	3	36	junction_2	11.534296684237	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTTTTTATATACTTAC	354	False	NA	1	True	AATAAA	-25	NA	61854143	61824847	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61826600_61827103_61827259_61836009_61836110_61839420_61840582_61842121_61842361_61853858
H1_mix_00051400	chr2	-	2372	14	FSM	ENSG00000115484.15	ENST00000394440.8	2376	14	0	4	0	-4	multi-exon	FALSE	canonical	3	2445	junction_12	262.683241199549	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATGTCTTGTTCCAGTGA	-29	True	NA	-5	True	NA	NA	NA	61888656	61868088	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61868707_61869439_61869554_61872081_61872317_61872457_61872589_61873001_61873113_61873196_61873294_61876094_61876235_61876919_61877053_61877392_61877515_61878868_61879012_61880285_61880395_61883458_61883549_61885019_61885073_61888380
H1_mix_00051401	chr2	-	2261	13	FSM	ENSG00000115484.15	ENST00000544079.2	2261	13	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_11	819.153153499935	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAGCAAATCTTACTTAAA	NA	False	NA	-41	True	AATAAA	-15	NA	61888671	61868124	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61868707_61869439_61869554_61872081_61872317_61872457_61872589_61873001_61873113_61873196_61873294_61876094_61876235_61876919_61877053_61877392_61877515_61878868_61879012_61880285_61880395_61885019_61885073_61888380
H1_mix_00051402	chr2	-	1656	4	FSM	ENSG00000186889.10	ENST00000335390.6	1654	4	0	-2	0	2	multi-exon	FALSE	canonical	3	18	junction_1	3.74165738677394	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTTGTCTTGTGCAATTA	-12	True	NA	NA	False	AATAAA	-33	NA	62506195	62500215	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_62501488_62502436_62502551_62502690_62502795_62506029
H1_mix_00051406	chr2	-	2401	17	NIC	ENSG00000143951.16	novel	4894	18	NA	NA	29	-3	combination_of_known_splicesites	FALSE	canonical	3	5	junction_7	26.3672974534744	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATGCAGCATAACAGCAAA	-2	True	NA	-11	True	AATAAA	-18	NA	63588448	63121833	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_63122057_63152913_63152946_63153494_63153575_63174669_63174833_63259306_63259410_63313247_63313312_63378385_63378510_63404047_63404658_63433744_63433937_63437420_63437555_63439756_63439872_63484603_63484664_63484916_63484988_63486541_63486587_63487446_63487495_63492855_63492941_63588196
H1_mix_00051407	chr2	-	1385	1	FSM	ENSG00000233716.1	ENST00000438685.1	1125	1	-688	428	-688	-428	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAGGATCTAATATTTGT	NA	False	NA	NA	False	NA	NA	NA	63234265	63232880	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_63232900_63234300
H1_mix_00051410	chr2	-	864	1	FSM	ENSG00000228305.2	ENST00000436998.1	654	1	-93	-117	-93	117	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGAATGTTGAGGGGTG	NA	False	NA	NA	False	ATTAAA	-36	NA	63622924	63622060	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_63622100_63622900
H1_mix_00051414	chr2	-	3716	7	FSM	ENSG00000197329.12	ENST00000358912.5	3716	7	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_6	42.0849009609015	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGGCCTTTTCTAAGTTA	-1	True	NA	NA	False	AATAAA	-25	NA	64144420	64092651	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_64095269_64096124_64096314_64096412_64096611_64100397_64100500_64104700_64104831_64108239_64108380_64144080
H1_mix_00051415	chr2	-	698	5	FSM	ENSG00000197329.12	ENST00000466177.6	698	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	240.7675227268	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTACAACATCTTAAATT	57	False	NA	NA	False	AATATA	-30	NA	64144362	64100397	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_64100500_64104553_64104598_64104700_64104831_64108239_64108380_64144080
H1_mix_00051416	chr2	-	553	3	FSM	ENSG00000197329.12	ENST00000468869.2	553	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGACCAGTGAACAAAGAT	-1	True	NA	NA	False	AATGAA	-45	NA	64144396	64108351	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_64108380_64143317_64143527_64144080
H1_mix_00051418	chr2	-	219	1	FSM	ENSG00000270354.1	ENST00000604190.1	219	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGATGAGCACATAAACCAT	4377	False	NA	NA	False	NA	NA	NA	64208716	64208497	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_64208500_64208700
H1_mix_00051419	chr2	-	836	2	Antisense	novelGene_ENSG00000225889.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTGAGCAATAAAGCTTT	9506	False	NA	NA	False	NA	NA	NA	64253735	64252857	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_-_64253592_64253633
H1_mix_00051422	chr2	-	626	2	FSM	ENSG00000237638.3	ENST00000666526.2	671	2	63	-18	5	18	multi-exon	FALSE	canonical	3	30	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTATATCCATTGTAATCT	19	True	NA	54	True	AATAGA	-21	NA	65056163	65047835	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_65048213_65055914
H1_mix_00051425	chr2	-	1333	5	FSM	ENSG00000138069.18	ENST00000409751.1	1333	5	0	0	0	0	multi-exon	FALSE	canonical	1	14	junction_3	592.711776498493	236	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATGGTGATAAGTATTG	8	True	NA	-12	True	AATAAA	-29	NA	65130104	65087870	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_65088691_65088938_65089071_65090982_65091079_65104733_65104807_65129892
H1_mix_00051428	chr2	-	2300	5	FSM	ENSG00000197223.12	ENST00000355848.7	2233	5	0	-67	0	67	multi-exon	TRUE	canonical	3	122	junction_4	131.287851684762	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCCAGATACAGTGCTA	11	True	NA	NA	False	AATATA	-15	NA	68062983	68041062	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_68043054_68045987_68046044_68046343_68046411_68047172_68047320_68062944
H1_mix_00051429	chr2	-	2498	5	FSM	ENSG00000197223.12	ENST00000410067.8	2241	5	0	-257	0	257	multi-exon	FALSE	canonical	3	230	junction_4	84.6492764292761	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTTGACTATGGTGCAG	-10	True	NA	NA	False	CATAAA	-20	NA	68063004	68040872	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_68043054_68045987_68046044_68046343_68046411_68047172_68047320_68062957
H1_mix_00051430	chr2	-	1222	6	NIC	ENSG00000197223.12	novel	772	6	NA	NA	4	9	combination_of_known_junctions	FALSE	canonical	3	15	junction_5	192.791701066203	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTATTTTTATCTTTT	16	True	NA	-1	True	AATAAA	-24	NA	68062978	68042199	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_68043054_68045987_68046044_68046343_68046411_68047172_68047320_68053060_68053138_68062957
H1_mix_00051431	chr2	-	2591	8	FSM	ENSG00000243667.7	ENST00000295121.11	2591	8	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_7	11.0176111340908	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGCTTTATAAATGCTTA	-11	True	NA	50	True	AATAAA	-19	NA	68157527	68129804	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_68131446_68134701_68134800_68137298_68137434_68138741_68138858_68141693_68141796_68144584_68144716_68147466_68147568_68157260
H1_mix_00051433	chr2	-	1542	7	FSM	ENSG00000243667.7	ENST00000409164.1	1517	7	9	-34	0	28	multi-exon	FALSE	canonical	3	113	junction_6	9.71968220788222	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAAGCAATATGTACTTGG	43	True	NA	NA	False	GATAAA	-37	NA	68157473	68134055	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_68134800_68137298_68137434_68138741_68138858_68141693_68141796_68144584_68144716_68147466_68147568_68157260
H1_mix_00051435	chr2	-	3052	6	FSM	ENSG00000221823.11	ENST00000234310.8	3024	6	0	-28	0	28	multi-exon	FALSE	canonical	3	56	junction_4	7.1442284397967	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCCATAGCTATGAGAATT	-15	True	NA	17	True	AATAAA	-43	NA	68252532	68178828	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_68181011_68186467_68186653_68187254_68187315_68188513_68188691_68217091_68217132_68252124
H1_mix_00051436	chr2	-	1896	3	FSM	ENSG00000119865.9	ENST00000263655.4	1896	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	2.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCTGACTTGCATTCTTA	17	True	NA	-1	True	AATAAA	-15	NA	68319949	68293009	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_68294027_68317156_68317308_68319221
H1_mix_00051437	chr2	-	5679	4	FSM	ENSG00000204923.4	ENST00000377957.4	5699	4	20	0	20	0	multi-exon	FALSE	canonical	1	5	junction_2	3.29983164553722	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTATTATTTTGAATTA	11	True	NA	-15	True	AATAAA	-17	NA	68467274	68459421	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_68464371_68464839_68465179_68466143_68466471_68467210
H1_mix_00051438	chr2	-	8652	19	FSM	ENSG00000198380.13	ENST00000361060.5	8632	19	0	-20	0	20	multi-exon	FALSE	canonical	3	555	junction_4	58.8591119685677	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTGCTGCTACGTAGAAA	5	True	NA	9	True	AATAAA	-33	NA	69387248	69319759	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_69326234_69326913_69327076_69328270_69328439_69329296_69329425_69329683_69329799_69337897_69338056_69338444_69338566_69342151_69342250_69345903_69346000_69348170_69348335_69350077_69350184_69354488_69354569_69356495_69356558_69358328_69358464_69359267_69359327_69363544_69363671_69370000_69370109_69374005_69374114_69387064
H1_mix_00051439	chr2	-	922	8	FSM	ENSG00000169599.13	ENST00000410022.7	898	8	0	-24	0	11	multi-exon	FALSE	canonical	3	314	junction_5	22.0315173127509	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCATATGAGTTATTTATA	4	True	NA	-3	True	TATAAA	-19	NA	69437435	69396101	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_69396291_69400363_69400539_69406021_69406083_69415184_69415300_69419537_69419605_69423581_69423718_69431901_69432006_69437360
H1_mix_00051444	chr2	-	325	2	FSM	ENSG00000115977.21	ENST00000492192.1	453	2	128	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATCTAGAAACCATC	-5	True	NA	NA	False	AAGAAA	-37	NA	69643717	69643092	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_69643275_69643574
H1_mix_00051445	chr2	-	3170	1	FSM	ENSG00000244617.3	ENST00000320256.6	1543	1	-1628	1	-1628	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATGTAATGTGTTGATTG	NA	False	NA	1	True	AATAAA	-18	NA	69963259	69960089	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_69960100_69963300
H1_mix_00051446	chr2	-	658	3	ISM	ENSG00000179818.16	ENST00000691445.1	1297	4	1001	483	16	0	3prime_fragment	FALSE	canonical	3	7	junction_1	1.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTGGTTTTTAGAGAGA	1100	False	NA	NA	False	AAAACA	-25	NA	70018081	69993862	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_69994251_69996685_69996889_70018014
H1_mix_00051450	chr2	-	239	1	NIC	ENSG00000179818.16	novel	668	5	NA	NA	-140	-8872	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCCCGCCTCTTCACCAG	NA	False	NA	NA	False	NA	NA	NA	70103049	70102810	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_70102800_70103000
H1_mix_00051451	chr2	-	656	2	FSM	ENSG00000231327.2	ENST00000414141.2	679	2	21	2	21	0	multi-exon	FALSE	canonical	3	40	junction_1	0	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTGTCATACTTCTTT	7	True	NA	0	True	AAAAAG	-18	NA	70125311	70124035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70124426_70125045
H1_mix_00051452	chr2	-	2527	10	FSM	ENSG00000115998.8	ENST00000264434.7	2524	10	0	-3	0	3	multi-exon	FALSE	canonical	3	23	junction_6	8.47800349197124	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTCATGGTTGCCTGTTT	-4	True	NA	NA	False	AATAAA	-27	NA	70191019	70149881	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70150565_70160624_70160788_70165091_70165193_70165527_70165636_70169556_70169662_70175672_70175778_70179531_70179643_70181162_70181998_70182666_70182936_70190972
H1_mix_00051453	chr2	-	2652	10	NIC	ENSG00000115998.8	novel	2524	10	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	13.3203640627962	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATATCTCATGGTTGCCTG	-9	True	NA	NA	False	AATAAA	-24	NA	70190717	70149884	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_70150565_70160624_70160788_70165091_70165193_70165527_70165636_70169556_70169662_70175672_70175778_70179531_70179643_70181162_70181998_70182666_70182936_70190542
H1_mix_00051454	chr2	-	4637	13	FSM	ENSG00000116001.17	ENST00000433529.7	4634	13	0	-3	0	3	multi-exon	TRUE	canonical	3	344	junction_8	71.9387760529744	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTCTACCTTCATTTGA	4	True	NA	3	True	AATAAA	-28	NA	70248628	70209440	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70212846_70214348_70214495_70215370_70215495_70216207_70216293_70216403_70216500_70216885_70216995_70224553_70224630_70227734_70227823_70229058_70229092_70229263_70229319_70230755_70230855_70236078_70236176_70248404
H1_mix_00051455	chr2	-	4636	12	FSM	ENSG00000116001.17	ENST00000415783.6	4633	12	0	-3	0	3	multi-exon	FALSE	canonical	3	72	junction_8	133.50030179184	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTCTACCTTCATTTGA	-28	True	NA	3	True	AATAAA	-28	NA	70248660	70209440	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70212846_70214348_70214495_70215370_70215495_70216207_70216293_70216403_70216500_70216885_70216995_70224553_70224630_70227734_70227823_70229263_70229319_70230755_70230855_70236078_70236176_70248404
H1_mix_00051456	chr2	-	3823	13	FSM	ENSG00000116001.17	ENST00000282574.8	3823	13	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	126.124938057467	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGGATCTTCTTGCAG	-3	True	NA	-8	True	ATTAAA	-22	NA	70248580	70210203	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70212846_70214348_70214492_70215370_70215495_70216207_70216293_70216403_70216500_70216885_70216995_70224553_70224630_70227734_70227823_70229058_70229092_70229263_70229319_70230755_70230855_70236078_70236176_70248404
H1_mix_00051459	chr2	-	915	9	FSM	ENSG00000116001.17	ENST00000474809.6	915	9	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	184.133740457853	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGAAAAATACGCTAGATT	-26	True	NA	NA	False	AAGAAA	-18	NA	70248658	70216847	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70216995_70224553_70224630_70225327_70225394_70227734_70227823_70229058_70229092_70229263_70229319_70230755_70230855_70236078_70236176_70248404
H1_mix_00051463	chr2	-	594	4	FSM	ENSG00000143977.14	ENST00000272348.7	594	4	0	0	0	0	multi-exon	FALSE	canonical	3	4036	junction_2	1853.69852517129	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTCTGTCCATCATCTT	-16	True	NA	-1	True	ATTAAA	-38	NA	70293740	70281361	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70281685_70288067_70288193_70289349_70289373_70293617
H1_mix_00051464	chr2	-	571	3	FSM	ENSG00000143977.14	ENST00000429728.1	566	3	0	-5	0	0	multi-exon	FALSE	canonical	3	302	junction_2	3884	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTCTGTCCATCATCTT	-16	True	NA	-1	True	ATTAAA	-38	NA	70293740	70281361	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70281685_70288067_70288193_70293617
H1_mix_00051465	chr2	-	2107	3	FSM	ENSG00000035141.8	ENST00000430566.6	2107	3	0	0	0	0	multi-exon	TRUE	canonical	2	29	junction_2	1131	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGAGTCTTCTTTCCTT	-1	True	NA	-3	True	AATAAA	-22	NA	70302067	70295975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70297478_70300839_70300981_70301603
H1_mix_00051466	chr2	-	1809	3	FSM	ENSG00000035141.8	ENST00000037869.7	1810	3	0	1	0	0	multi-exon	FALSE	canonical	3	2222	junction_2	34.5	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGAGTCTTCTTTCCTT	NA	False	NA	-3	True	AATAAA	-22	NA	70302090	70295975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70297478_70300839_70300981_70301924
H1_mix_00051467	chr2	-	2395	3	FSM	ENSG00000035141.8	ENST00000460307.1	2398	3	0	3	0	-3	multi-exon	FALSE	canonical	3	62	junction_2	1114.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTATTGAGTCTTCTTTC	10	True	NA	-6	True	AATAAA	-19	NA	70302056	70295978	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70297478_70300839_70301604_70301924
H1_mix_00051468	chr2	-	4402	6	FSM	ENSG00000163235.16	ENST00000295400.11	4117	6	-286	1	81	-1	multi-exon	FALSE	canonical	3	12	junction_1	1.35646599662505	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAGACTGGAGTGTTTCT	78	False	NA	-3	True	AATGAA	-15	NA	70554112	70447284	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70450867_70453217_70453328_70456338_70456489_70465615_70465737_70514858_70514913_70553727
H1_mix_00051469	chr2	-	9985	16	FSM	ENSG00000075340.23	ENST00000264436.9	9290	16	0	-695	0	695	multi-exon	TRUE	canonical	3	111	junction_10	12.3486391512947	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAAGCCCTGGCTCTTTC	-9	True	NA	NA	False	NA	NA	NA	70768200	70656088	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70663736_70672877_70673007_70674677_70674826_70676795_70676886_70677757_70677878_70678703_70678962_70683590_70683768_70688023_70688123_70690785_70690930_70692402_70692553_70695720_70695802_70696244_70696397_70704320_70704460_70706225_70706443_70713065_70713185_70767885
H1_mix_00051471	chr2	-	3834	13	FSM	ENSG00000075340.23	ENST00000413157.6	3776	13	-58	0	-45	0	multi-exon	FALSE	canonical	3	111	junction_7	11.6054943884352	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCGGGAGCATCCTTTGA	31	False	NA	-9	True	AATAAA	-16	NA	70768270	70675092	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70676886_70677757_70677878_70678703_70678962_70683590_70683768_70688023_70688123_70690785_70690930_70692402_70692553_70695720_70695802_70696244_70696397_70704320_70704460_70706225_70706443_70713065_70713185_70767885
H1_mix_00051472	chr2	-	3585	2	FSM	ENSG00000144043.12	ENST00000478068.1	3579	2	0	-6	0	4	multi-exon	FALSE	canonical	3	143	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAGTGATGTGTACAAGG	5129	False	NA	NA	False	AATAAA	-20	NA	70989721	70985937	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70988716_70988914
H1_mix_00051473	chr2	-	3367	6	FSM	ENSG00000144043.12	ENST00000272438.9	3365	6	2	-4	2	4	multi-exon	FALSE	canonical	3	136	junction_3	9.69535971483266	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAGTGATGTGTACAAGG	-21	True	NA	NA	False	AATAAA	-20	NA	70994871	70985937	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70988716_70988914_70989018_70989748_70989817_70991829_70991984_70993695_70993776_70994687
H1_mix_00051475	chr2	-	320	1	FSM	ENSG00000272735.1	ENST00000608897.1	607	1	239	48	239	-48	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACCACGTTGTAATTCACA	647	False	NA	NA	False	NA	NA	NA	71067886	71067566	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_71067600_71067900
H1_mix_00051476	chr2	-	467	1	Intergenic	novelGene_693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCTGGCTCCACTTACAA	7810	False	NA	NA	False	AAAACA	-4	NA	71084108	71083641	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_-_71083600_71084100
H1_mix_00051477	chr2	-	1448	3	NIC	ENSG00000124370.11	novel	499	3	NA	NA	-47	101	intron_retention	FALSE	canonical	3	31	junction_2	36	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGGGCAAAAGTTTCTAA	1231	False	NA	90	True	NA	NA	NA	71130286	71109582	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_71110123_71124205_71124544_71129716
H1_mix_00051478	chr2	-	1199	3	FSM	ENSG00000124370.11	ENST00000244217.6	824	3	0	-375	0	372	multi-exon	FALSE	canonical	3	75	junction_2	14	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACAACAGGTCCTAGGGG	14	True	NA	NA	False	TTTAAA	-45	NA	71130229	71109311	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_71110123_71124205_71124544_71130179
H1_mix_00051479	chr2	-	6300	4	FSM	ENSG00000124374.9	ENST00000244221.9	6300	4	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	17.5562587763516	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGGCAGTGGTACCCT	-20	True	NA	-26	True	AATAAA	-13	NA	71227103	71182737	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_71188536_71189844_71190022_71202451_71202601_71226927
H1_mix_00051481	chr2	-	5930	23	FSM	ENSG00000144036.16	ENST00000634650.1	2583	23	-22	-3325	0	0	multi-exon	FALSE	canonical	1	3	junction_1	52.1497367330106	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTGTTGTCTCATGGGTAT	-15	True	NA	-3	True	ATTAAA	-33	NA	72826041	72175983	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_72179462_72182893_72182906_72184074_72184188_72334946_72335021_72379728_72379871_72465159_72465340_72480615_72480751_72492317_72492430_72495429_72495540_72496453_72496560_72498453_72498552_72499900_72499973_72513131_72513253_72514633_72514681_72515042_72515127_72559452_72559522_72575491_72575669_72718102_72718308_72731006_72731053_72731154_72731246_72733070_72733119_72741303_72741470_72825797
H1_mix_00051484	chr2	-	4019	14	FSM	ENSG00000144040.13	ENST00000272433.7	4016	14	0	-3	0	3	multi-exon	FALSE	canonical	3	108	junction_2	38.6506121877158	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGTGGTTTTGTGAATTG	9	True	NA	1	True	AATAAA	-20	NA	73071712	72942032	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_72945100_72961130_72961249_72968447_72968534_72971569_72971686_72988257_72988349_72998948_72999015_73000430_73000488_73001524_73001579_73020238_73020265_73022521_73022577_73023187_73023215_73040853_73040932_73058527_73058597_73071603
H1_mix_00051486	chr2	-	1690	3	FSM	ENSG00000144040.13	ENST00000472259.5	1690	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	9	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCACAGTTAGTGTAAGATA	18	True	NA	NA	False	TATAAA	-30	NA	73071266	73049085	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_73049900_73058527_73058597_73070459
H1_mix_00051487	chr2	-	954	3	NIC	ENSG00000144040.13	novel	1690	3	NA	NA	9	-26	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	106.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGTCTGTGGCATTCTGT	9174	False	NA	NA	False	AATAAA	-21	NA	73071700	73049111	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_73049900_73058527_73058597_73071603
H1_mix_00051488	chr2	-	381	3	FSM	ENSG00000144040.13	ENST00000484123.1	351	3	-38	8	9	-8	multi-exon	FALSE	canonical	3	75	junction_1	86	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGAGATCAGTGTTGC	9174	False	NA	-9	True	AATAAA	-31	NA	73071700	73053336	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_73053552_73058527_73058597_73071603
H1_mix_00051489	chr2	-	6286	6	FSM	ENSG00000135631.17	ENST00000486777.7	6285	6	0	-1	0	1	multi-exon	FALSE	canonical	3	23	junction_3	12.6269552941317	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTCTGTTGTGTTCCTG	-13	True	NA	-4	True	AATAAA	-18	NA	73112948	73073380	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_73075725_73075992_73076183_73079650_73081664_73088049_73088750_73088878_73089316_73112346
H1_mix_00051491	chr2	-	4343	5	FSM	ENSG00000135631.17	ENST00000258098.6	4342	5	0	-1	0	1	multi-exon	FALSE	canonical	3	11	junction_2	17.1828402774396	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTCTGTTGTGTTCCTG	5189	False	NA	-4	True	AATAAA	-18	NA	73113018	73073380	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_73075725_73075992_73076183_73088049_73088750_73088878_73089316_73112346
H1_mix_00051493	chr2	-	6085	9	ISM	ENSG00000163013.12	ENST00000295133.9	6928	12	3622	6	796	2	intron_retention	FALSE	canonical	3	18	junction_4	3.82222121285516	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCCCCAGAGAGGTAAAT	3939	False	NA	-15	True	AATAAA	-22	NA	73266008	73254687	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_73259045_73259180_73259297_73260388_73260548_73260739_73260859_73263212_73263309_73263677_73263831_73263937_73264054_73264277_73264520_73265281
H1_mix_00051495	chr2	-	1632	6	FSM	ENSG00000144034.16	ENST00000409716.6	816	6	-96	-720	-96	-1	multi-exon	FALSE	canonical	3	110	junction_4	425.898109880755	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCTTGGTGATTTT	NA	False	NA	NA	False	TTTAAA	-1	NA	73737496	73729169	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_73730030_73730559_73730737_73732162_73732286_73732583_73732701_73734428_73734589_73737301
H1_mix_00051496	chr2	-	664	5	FSM	ENSG00000144034.16	ENST00000272424.11	664	5	0	0	0	0	multi-exon	FALSE	canonical	3	598	junction_4	179.769991934138	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAATTGTGCATTATAGAAA	-1	True	NA	NA	False	ATTAAA	-34	NA	73737345	73729872	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_73730030_73730559_73730737_73732162_73732286_73734428_73734592_73737301
H1_mix_00051497	chr2	-	1149	6	FSM	ENSG00000144034.16	ENST00000318190.7	819	6	25	-355	0	-301	multi-exon	FALSE	canonical	3	110	junction_4	406.613034714826	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAAAAAAACCAAAAA	4	True	NA	NA	False	NA	NA	NA	73737375	73729534	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_73730030_73730559_73730737_73732162_73732286_73732583_73732701_73734428_73734592_73737301
H1_mix_00051498	chr2	-	806	4	FSM	ENSG00000144034.16	ENST00000497464.5	798	4	0	-8	0	8	multi-exon	FALSE	canonical	3	598	junction_3	198.415389188104	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGTTTTTATGTTCTT	4	True	NA	1	True	AATAAA	-27	NA	73737340	73730255	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_73730737_73732162_73732286_73734428_73734592_73737301
H1_mix_00051500	chr2	-	694	4	FSM	ENSG00000144034.16	ENST00000470012.1	694	4	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	223.952872026435	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTATTTTTGCTTGAGAA	9	True	NA	NA	False	NA	NA	NA	73737335	73731905	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_73732286_73732583_73732701_73734428_73734592_73737301
H1_mix_00051505	chr2	-	4844	7	NNC	ENSG00000114978.18	novel	4896	6	NA	NA	0	76087	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	401.551435753324	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGAGGAATGAACCTGAAT	-15	True	NA	NA	False	AATAAA	-37	NA	74178866	74076440	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_74076468_74152593_74156646_74159090_74159255_74165217_74165352_74167013_74167108_74172585_74172753_74178660
H1_mix_00051506	chr2	-	462	3	FSM	ENSG00000163170.12	ENST00000295326.4	444	3	0	-18	0	3	multi-exon	FALSE	canonical	3	654	junction_1	525.5	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGTTTCAGGTTCCTTT	-7	True	NA	1	True	ATTAAA	-36	NA	74147905	74135396	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74135659_74145188_74145304_74147820
H1_mix_00051507	chr2	-	558	4	FSM	ENSG00000163170.12	ENST00000327428.10	555	4	0	-3	0	3	multi-exon	TRUE	canonical	3	1184	junction_1	216.750240292062	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGTTTCAGGTTCCTTT	-14	True	NA	1	True	ATTAAA	-36	NA	74147912	74135396	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74135659_74142271_74142361_74145188_74145304_74147820
H1_mix_00051508	chr2	-	5097	6	FSM	ENSG00000114978.18	ENST00000396049.5	4896	6	11	-212	0	212	multi-exon	FALSE	canonical	3	968	junction_2	76.1666593727203	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATCAGGCTCCAGATCT	-17	True	NA	NA	False	NA	NA	NA	74178868	74152315	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74156646_74159090_74159255_74165217_74165352_74167013_74167108_74172585_74172753_74178660
H1_mix_00051509	chr2	-	4854	6	NIC	ENSG00000114978.18	novel	4896	6	NA	NA	5	-34	combination_of_known_junctions	FALSE	canonical	3	115	junction_5	374.587239505032	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTATTTAAATATAGAAAC	-23	True	NA	NA	False	ATTAAA	-21	NA	74178874	74152561	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_74156646_74159090_74159255_74165217_74165352_74167013_74167108_74172585_74172750_74178660
H1_mix_00051511	chr2	-	4137	26	FSM	ENSG00000204843.13	ENST00000409438.5	4145	26	10	-2	10	0	multi-exon	FALSE	canonical	3	25	junction_25	283.178117798675	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGTGTGGTGTTGAGA	5577	False	NA	-4	True	ATTAAA	-19	NA	74374725	74361154	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74361637_74362051_74362142_74362649_74362730_74362993_74363178_74363293_74363428_74365074_74365242_74365514_74365658_74365892_74366019_74366243_74366376_74366458_74366621_74366782_74366933_74367044_74367108_74367351_74367421_74367695_74367865_74367970_74368132_74368727_74368881_74369097_74369215_74369299_74369492_74369964_74370070_74370185_74370346_74370465_74370545_74370620_74370826_74370978_74371177_74371536_74371729_74372927_74372949_74374322
H1_mix_00051512	chr2	-	4152	27	FSM	ENSG00000204843.13	ENST00000633691.1	4160	27	10	-2	10	0	multi-exon	FALSE	canonical	2	5	junction_6	367.181502689283	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGTGTGGTGTTGAGA	5577	False	NA	-4	True	ATTAAA	-19	NA	74374725	74361154	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74361637_74362051_74362142_74362649_74362730_74362993_74363178_74363293_74363428_74363613_74363629_74365074_74365242_74365514_74365658_74365892_74366019_74366243_74366376_74366458_74366621_74366782_74366933_74367044_74367108_74367351_74367421_74367695_74367865_74367970_74368132_74368727_74368881_74369097_74369215_74369299_74369492_74369964_74370070_74370185_74370346_74370465_74370545_74370620_74370826_74370978_74371177_74371536_74371729_74372927_74372949_74374322
H1_mix_00051513	chr2	-	4230	27	FSM	ENSG00000204843.13	ENST00000434055.5	4229	27	0	-1	0	0	multi-exon	FALSE	canonical	3	817	junction_17	108.451888550534	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGTGTGGTGTTGAGA	-11	True	NA	-4	True	ATTAAA	-19	NA	74391867	74361154	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74361637_74362051_74362142_74362649_74362730_74362993_74363178_74363293_74363428_74365074_74365242_74365514_74365658_74365892_74366019_74366243_74366621_74366782_74366933_74367044_74367108_74367351_74367421_74367695_74367865_74367970_74368132_74368727_74368881_74369097_74369215_74369299_74369492_74369964_74370070_74370185_74370346_74370465_74370545_74370620_74370826_74370978_74371177_74371536_74371729_74377431_74377467_74377647_74377727_74377999_74378246_74391793
H1_mix_00051515	chr2	-	5100	20	FSM	ENSG00000204843.13	ENST00000466110.5	5414	20	314	0	167	0	multi-exon	FALSE	canonical	3	817	junction_15	122.47077779104	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGCTTCCTGTGTGGTGTT	8574	False	NA	-8	True	ATTAAA	-15	NA	74371728	74361158	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74361637_74362051_74362142_74362649_74362730_74362993_74363178_74363293_74363428_74365074_74365658_74365892_74366019_74366243_74366376_74366458_74366933_74367044_74367108_74367351_74367421_74367695_74367865_74367970_74368881_74369097_74369215_74369299_74369492_74369964_74370070_74370185_74370346_74370465_74370545_74370620_74370826_74370978
H1_mix_00051516	chr2	-	4024	28	FSM	ENSG00000204843.13	ENST00000409567.7	4024	28	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_27	214.183343892791	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTCCTTTCCCCTGCTGT	3	True	NA	NA	False	NA	NA	NA	74380299	74361498	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74361637_74362051_74362142_74362649_74362730_74362993_74363178_74363293_74363428_74365074_74365242_74365514_74365658_74365892_74366019_74366243_74366376_74366458_74366621_74366782_74366933_74367044_74367108_74367351_74367421_74367695_74367865_74367970_74368132_74368727_74368881_74369097_74369215_74369299_74369492_74369964_74370070_74370185_74370346_74370465_74370545_74370620_74370826_74370978_74371177_74371536_74371729_74377431_74377467_74377647_74377727_74377999_74378246_74380004
H1_mix_00051519	chr2	-	272	1	FSM	ENSG00000233155.1	ENST00000414130.1	321	1	6	43	6	-43	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGAGAAGGGCATCTCGC	3179	False	NA	NA	False	NA	NA	NA	74418436	74418164	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74418200_74418400
H1_mix_00051520	chr2	-	2647	13	FSM	ENSG00000114993.17	ENST00000305557.9	2646	13	0	-1	0	0	multi-exon	FALSE	canonical	3	8	junction_12	141.412418910866	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGCCTCACATCATCCC	-47	True	NA	21	True	NA	NA	NA	74440583	74425834	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74426575_74427168_74427274_74427423_74427593_74428267_74428397_74428630_74428738_74428847_74428943_74429827_74430038_74430251_74430370_74430464_74430519_74430615_74430678_74432466_74432667_74439550_74439978_74440352
H1_mix_00051521	chr2	-	2221	12	FSM	ENSG00000114993.17	ENST00000272430.10	2221	12	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_3	40.7793903545155	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGCCTCACATCATCCC	-21	True	NA	21	True	NA	NA	NA	74441937	74425834	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74426575_74427168_74427274_74427423_74427593_74428267_74428397_74428630_74428738_74428847_74428943_74429827_74430038_74430251_74430370_74430464_74430519_74430615_74430678_74432466_74432667_74441705
H1_mix_00051522	chr2	-	2220	12	FSM	ENSG00000114993.17	ENST00000233330.6	2220	12	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_11	107.203136132737	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCACCTGGCTCCTGAG	1785	False	NA	-27	True	ATTAAA	-15	NA	74440631	74425882	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74426575_74427168_74427274_74427423_74427593_74428267_74428397_74428630_74428738_74428847_74428943_74429827_74430038_74430251_74430370_74430464_74430519_74430615_74430678_74432466_74432667_74440352
H1_mix_00051526	chr2	-	2653	5	FSM	ENSG00000115275.15	ENST00000649075.1	2649	5	0	-4	0	0	multi-exon	FALSE	canonical	3	11	junction_1	95.7454307003734	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTCTATTTTTCTAAATAA	-20	True	NA	-45	True	NA	NA	NA	74465400	74461101	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74462774_74462960_74463013_74463189_74463387_74464495_74464723_74464895
H1_mix_00051527	chr2	-	2433	5	FSM	ENSG00000115275.15	ENST00000452063.7	2433	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	92.2831918607067	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCAAACCTTCCTCATTT	-16	True	NA	-122	True	NA	NA	NA	74465396	74461178	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74463013_74463189_74463387_74464495_74464723_74464895_74464988_74465313
H1_mix_00051530	chr2	-	496	3	FSM	ENSG00000204822.7	ENST00000258105.8	496	3	0	0	0	0	multi-exon	FALSE	canonical	3	581	junction_1	10.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTCTGGAACAAGACTAG	-13	True	NA	-46	True	AATAAA	-23	NA	74472680	74471981	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74472253_74472357_74472471_74472568
H1_mix_00051531	chr2	-	4128	9	FSM	ENSG00000135637.14	ENST00000393965.8	4128	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	5.14174095030078	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTTCTTTCCTGCCTTC	-15	True	NA	NA	False	NA	NA	NA	74482998	74472831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74474803_74474915_74475116_74475224_74475403_74475611_74475727_74480768_74480883_74480955_74481087_74481222_74481373_74481451_74481539_74481816
H1_mix_00051539	chr2	-	1202	8	FSM	ENSG00000115289.14	ENST00000475863.5	1056	8	-142	-4	137	4	multi-exon	FALSE	canonical	3	85	junction_1	3.95381500088516	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTGCCTTATTCTTCCT	5679	False	NA	1	True	AATAAA	-20	NA	74507558	74505038	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74505191_74505338_74505420_74505551_74505639_74505736_74505771_74505951_74506058_74506180_74506253_74506731_74506885_74507041
H1_mix_00051542	chr2	-	1649	11	FSM	ENSG00000115307.17	ENST00000463900.5	1645	11	0	-4	0	-3	multi-exon	FALSE	canonical	3	753	junction_2	58.4808515669873	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTGTCTCTCTCGGTCT	-2	True	NA	-21	True	ATTAAA	-23	NA	74529697	74526647	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74526837_74526940_74527060_74527247_74527364_74527470_74527591_74527735_74527839_74527939_74528007_74528247_74528322_74528416_74528490_74528750_74529283_74529361_74529500_74529579
H1_mix_00051543	chr2	-	1462	12	FSM	ENSG00000115307.17	ENST00000377526.4	1458	12	0	-4	0	-3	multi-exon	FALSE	canonical	3	740	junction_9	69.1563087601002	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTGTCTCTCTCGGTCT	-11	True	NA	-21	True	ATTAAA	-23	NA	74529706	74526647	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74526837_74526940_74527060_74527247_74527364_74527470_74527591_74527735_74527839_74527939_74528007_74528247_74528322_74528416_74528490_74528750_74528936_74529131_74529283_74529361_74529500_74529579
H1_mix_00051544	chr2	-	1658	11	FSM	ENSG00000115307.17	ENST00000466894.5	1658	11	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	247.871922572929	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCCAATGTCACATTAAAT	10	True	NA	-62	True	AAAAAG	-15	NA	74529685	74526688	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74526837_74526940_74527122_74527247_74527364_74527470_74527591_74527735_74527839_74527939_74528007_74528247_74528322_74528416_74528490_74528750_74529283_74529361_74529500_74529579
H1_mix_00051547	chr2	-	2837	10	FSM	ENSG00000115318.12	ENST00000470907.6	2837	10	0	0	0	0	multi-exon	TRUE	canonical	3	128	junction_9	22.286019533929	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGACAAACAGTGTTAAAT	6041	False	NA	NA	False	AATAAA	-44	NA	74549663	74532413	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74533680_74533881_74533994_74534099_74534237_74534315_74534432_74534530_74534775_74535291_74535455_74535587_74535756_74535995_74536151_74536290_74536472_74549368
H1_mix_00051549	chr2	-	2590	11	FSM	ENSG00000159374.18	ENST00000421985.2	2544	11	0	-46	0	46	multi-exon	FALSE	canonical	1	4	junction_3	14.9549322967374	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAAAAAGCCCTGTGAGG	-8	True	NA	45	True	ACTAAA	-23	NA	74648330	74557836	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74558875_74559697_74559710_74560150_74560292_74562216_74562424_74575437_74575580_74576455_74576619_74581673_74581848_74607054_74607224_74614963_74615150_74640035_74640328_74648264
H1_mix_00051553	chr2	-	281	2	ISM	ENSG00000115363.14	ENST00000486489.1	524	3	555	25	155	-25	3prime_fragment	FALSE	canonical	3	15	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATAAATATGTATCTC	8949	False	NA	-36	True	NA	NA	NA	75560768	75558507	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_75558700_75560679
H1_mix_00051554	chr2	-	4486	17	FSM	ENSG00000005436.14	ENST00000321027.8	4367	17	23	-142	0	142	multi-exon	FALSE	canonical	3	100	junction_10	27.8780127295688	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGGAATAAGGAGGGGGA	6	True	NA	NA	False	NA	NA	NA	75710892	75662562	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_75664784_75665928_75666054_75670137_75670285_75671949_75672017_75673443_75673521_75680192_75680315_75687826_75687978_75689025_75689226_75689968_75690082_75690637_75690720_75691976_75692101_75694240_75694428_75696199_75696316_75701189_75701288_75702198_75702424_75706522_75706652_75710590
H1_mix_00051555	chr2	-	3930	16	NIC	ENSG00000005436.14	novel	4367	17	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	8	junction_10	43.4125429903489	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATTGACTTAAACTGCTA	399	False	NA	-7	True	ATTAAA	-17	NA	75710606	75662708	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_75664784_75665928_75666054_75670137_75670285_75671949_75672017_75673443_75673521_75680192_75680315_75687826_75687978_75689025_75689226_75689968_75690082_75690637_75690720_75694240_75694428_75696199_75696316_75701189_75701288_75702198_75702424_75706522_75706652_75710590
H1_mix_00051558	chr2	-	3709	5	ISM	ENSG00000005436.14	ENST00000427862.1	632	6	13154	-1925	-4524	-1	3prime_fragment	FALSE	canonical	3	154	junction_4	16.4069345095298	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATTGACTTAAACTGCTA	NA	False	NA	-7	True	ATTAAA	-17	NA	75674738	75662708	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_75664784_75665928_75666054_75670137_75670285_75671949_75672017_75673443
H1_mix_00051559	chr2	-	433	3	FSM	ENSG00000005436.14	ENST00000486016.1	595	3	52	110	52	-110	multi-exon	FALSE	canonical	3	100	junction_1	19	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTACTTTTCACTACTG	NA	False	NA	NA	False	TATAAA	-28	NA	75694427	75690597	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_75690720_75691976_75692101_75694240
H1_mix_00051560	chr2	-	1066	3	FSM	ENSG00000005436.14	ENST00000470503.1	1066	3	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	19.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTAAGCCTTAAAGGACTG	-1	True	NA	NA	False	AATAAA	-20	NA	75710899	75701795	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_75702424_75706522_75706652_75710590
H1_mix_00051561	chr2	-	3599	4	NNC	ENSG00000176204.14	novel	3616	3	NA	NA	36	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7.78888096369861	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGCTTGATGTTTTTATT	NA	False	NA	NA	False	AATAAA	-22	NA	77593283	77516657	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_77519865_77521667_77521819_77592814_77592936_77593163
H1_mix_00051563	chr2	-	823	1	FSM	ENSG00000223427.1	ENST00000265882.5	708	1	-16	-99	-16	99	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTTTTTTAAAGCTACA	15	False	NA	NA	False	NA	NA	NA	80163151	80162328	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_80162300_80163200
H1_mix_00051565	chr2	-	779	3	NNC	ENSG00000231781.1	novel	488	5	NA	NA	-14	61586	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	7.5	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAATAACCCACTATCT	8126	False	NA	-32	True	ATTAAA	-11	NA	82005714	81921685	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_81922163_81986430_81986580_82005561
H1_mix_00051566	chr2	-	1274	9	FSM	ENSG00000163541.12	ENST00000393868.7	1270	9	0	-4	0	4	multi-exon	FALSE	canonical	3	285	junction_8	22.2373559579371	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGAGGCTTATTATTG	-18	True	NA	-1	True	AATAAA	-23	NA	84459280	84423523	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_84423773_84425414_84425604_84431507_84431660_84433351_84433436_84441046_84441105_84441246_84441460_84443283_84443401_84449648_84449753_84459172
H1_mix_00051568	chr2	-	268	1	FSM	ENSG00000235847.2	ENST00000398295.3	965	1	310	387	310	-387	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGAGTGAATGTTGCTGA	NA	False	NA	NA	False	NA	NA	NA	84777913	84777645	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_84777600_84777900
H1_mix_00051569	chr2	-	1830	7	FSM	ENSG00000186854.11	ENST00000409520.7	1814	7	0	-16	0	0	multi-exon	FALSE	canonical	3	23	junction_3	15.0996688705415	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTTATTCATGATATAT	-17	True	NA	-7	True	AATAAA	-43	NA	84881084	84821649	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_84822101_84823952_84824205_84832054_84832146_84839148_84839324_84841860_84842008_84870224_84870786_84880931
H1_mix_00051571	chr2	-	6050	4	FSM	ENSG00000152291.15	ENST00000377386.8	6050	4	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	39.9694327649962	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTTAATACATTTATTT	-10	True	NA	35	True	AATAAA	-20	NA	85327989	85318026	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_85322742_85324914_85324999_85326507_85327686_85327916
H1_mix_00051572	chr2	-	6138	5	FSM	ENSG00000152291.15	ENST00000398263.6	6138	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_3	76.5453297073048	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTTAATACATTTATTT	-5	True	NA	35	True	AATAAA	-20	NA	85328251	85318026	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_85322742_85324914_85324999_85326507_85326805_85326978_85327686_85327916
H1_mix_00051574	chr2	-	3147	11	FSM	ENSG00000042445.14	ENST00000295802.9	3141	11	0	-6	0	6	multi-exon	TRUE	canonical	3	34	junction_9	9.27146158919941	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGTCTGCGCCTTCCCA	2	True	NA	NA	False	AATAAA	-27	NA	85354528	85341948	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_85343382_85343638_85343799_85343998_85344166_85344238_85344349_85344593_85344733_85345974_85346095_85349383_85349582_85350039_85350242_85350779_85351022_85351679_85351863_85354335
H1_mix_00051575	chr2	-	1924	10	FSM	ENSG00000042493.16	ENST00000263867.9	1250	10	-35	-639	-31	639	multi-exon	FALSE	canonical	3	61	junction_9	191.37849512174	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTCCCATCTGAGAAGGC	9136	False	NA	NA	False	NA	NA	NA	85410401	85394113	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_85394959_85395537_85395627_85398019_85398153_85398689_85398783_85399135_85399286_85401164_85401330_85401528_85401684_85401784_85401958_85402122_85402159_85410316
H1_mix_00051576	chr2	-	1221	10	FSM	ENSG00000042493.16	ENST00000409724.5	1151	10	56	-126	0	0	multi-exon	FALSE	canonical	0	0	junction_9	209.449071566925	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTTTCCTGCACCACCT	-3	True	NA	-22	True	AATAAA	-20	NA	85414018	85394766	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_85394959_85395537_85395627_85398019_85398153_85398689_85398783_85399135_85399286_85401164_85401330_85401528_85401684_85401784_85401958_85402122_85402159_85413983
H1_mix_00051577	chr2	-	930	8	FSM	ENSG00000042493.16	ENST00000447219.6	930	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	277.670778485043	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGCCCCCCAAGCCTGCC	5498	False	NA	NA	False	NA	NA	NA	85414039	85398689	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_85398783_85399135_85399286_85401164_85401330_85401528_85401684_85401784_85401958_85402122_85402159_85413142_85413245_85413983
H1_mix_00051578	chr2	-	549	2	FSM	ENSG00000042493.16	ENST00000491267.1	549	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGCTGTGCACCTCAAC	-3	True	NA	NA	False	NA	NA	NA	85414018	85401644	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_85402159_85413983
H1_mix_00051580	chr2	-	699	6	FSM	ENSG00000115486.13	ENST00000423570.5	1339	6	0	640	0	-640	multi-exon	FALSE	canonical	2	10	junction_2	59.3383518476878	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGCAGTCATGGTGG	-20	True	NA	NA	False	NA	NA	NA	85561473	85555483	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_85555591_85556181_85556261_85558538_85558663_85558945_85559076_85560814_85560986_85561385
H1_mix_00051581	chr2	-	600	2	FSM	ENSG00000115486.13	ENST00000481541.1	600	2	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGCTACCGGATAAGCT	1	True	NA	NA	False	NA	NA	NA	85561493	85558583	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_85559076_85561385
H1_mix_00051582	chr2	-	684	3	FSM	ENSG00000115486.13	ENST00000496962.2	657	3	-27	0	-15	0	multi-exon	FALSE	canonical	3	136	junction_1	2.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTTTTATGTGATTATA	281	False	NA	-9	True	ATTAAA	-18	NA	85561547	85558724	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_85559076_85560814_85560986_85561385
H1_mix_00051583	chr2	-	2019	8	FSM	ENSG00000168890.14	ENST00000334462.10	1553	8	-66	-400	-66	400	multi-exon	FALSE	canonical	3	67	junction_4	25.8883000915984	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCAGCTTTTTTTTTTTTTT	9285	False	NA	NA	False	NA	NA	NA	85602764	85598146	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_85599318_85599524_85599703_85599890_85600019_85600344_85600413_85601020_85601108_85601434_85601483_85601883_85602065_85602606
H1_mix_00051585	chr2	-	4262	4	FSM	ENSG00000168887.11	ENST00000306336.6	4274	4	12	0	12	0	multi-exon	FALSE	canonical	3	71	junction_2	6.94422221866655	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTTGCCAAGAGTTGT	-5	True	NA	0	True	AATAAA	-19	NA	85612054	85605253	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_85609068_85609434_85609587_85611667_85611787_85611877
H1_mix_00051586	chr2	-	1722	2	FSM	ENSG00000168887.11	ENST00000409734.3	1722	2	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGGTGAAACCCCATCT	17	True	NA	NA	False	NA	NA	NA	85612032	85610219	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_85611787_85611877
H1_mix_00051587	chr2	-	405	2	FSM	ENSG00000168887.11	ENST00000478626.1	405	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTATTACTTTTTTTAAA	308	False	NA	-6	True	AATATA	-21	NA	85611741	85611242	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_85611574_85611667
H1_mix_00051588	chr2	-	4256	7	FSM	ENSG00000115525.18	ENST00000638572.2	4366	7	0	110	0	-110	multi-exon	FALSE	canonical	3	24	junction_2	8.33499983336666	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCACATTTTCTTTATTCA	19	True	NA	NA	False	NA	NA	NA	85888990	85837229	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_85840393_85844395_85844555_85846376_85846564_85847860_85848205_85861180_85861293_85863361_85863486_85888823
H1_mix_00051589	chr2	-	2376	8	FSM	ENSG00000115525.18	ENST00000640425.1	2369	8	0	-7	0	0	multi-exon	FALSE	canonical	1	1	junction_3	17.8382757471862	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAGTTTAAAAAGATGAAAAA	-16	True	NA	-58	True	AAGAAA	-44	NA	85888888	85839188	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_85840393_85844395_85844555_85846376_85846564_85847381_85847563_85847860_85848205_85861180_85861293_85863361_85863486_85888823
H1_mix_00051591	chr2	-	12490	34	FSM	ENSG00000068654.17	ENST00000263857.11	12480	34	13	-23	0	23	multi-exon	FALSE	canonical	3	76	junction_31	18.6051228665083	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTCTGAGAACTGCCTAT	-11	True	NA	17	True	AATAAA	-42	NA	86105873	86020192	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_86027524_86027884_86028050_86028593_86028712_86030195_86030397_86031329_86031636_86032271_86032383_86033660_86033788_86038699_86038858_86039326_86039463_86040391_86040560_86041888_86042104_86042973_86043196_86044138_86044305_86045277_86045361_86045616_86045770_86047164_86047264_86048883_86049043_86049159_86049243_86052816_86053001_86054139_86054290_86065273_86065466_86070017_86070273_86075029_86075261_86077858_86077982_86078113_86078285_86080815_86080979_86081600_86081707_86083081_86083169_86088565_86088670_86088784_86088871_86089821_86089930_86098610_86098761_86099967_86100173_86105699
H1_mix_00051592	chr2	-	344	2	FSM	ENSG00000068654.17	ENST00000483538.1	593	2	249	0	249	0	multi-exon	FALSE	canonical	3	109	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTGTCCAGCTGTGTGG	221	False	NA	NA	False	NA	NA	NA	86065465	86054137	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_86054290_86065273
H1_mix_00051594	chr2	-	2639	15	FSM	ENSG00000132305.22	ENST00000442664.6	2627	15	0	-12	0	8	multi-exon	FALSE	canonical	1	124	junction_10	208.588746834824	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCTTTTCAAAAAGTACAG	32	True	NA	1	True	AATAAA	-28	NA	86195403	86143923	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_86144882_86146067_86146198_86147701_86147834_86151296_86151521_86153559_86153575_86158591_86158722_86159535_86159672_86161975_86162080_86166507_86166645_86170748_86170842_86171207_86171346_86173649_86173762_86179432_86179623_86181298_86181373_86195337
H1_mix_00051595	chr2	-	2685	14	NIC	ENSG00000132305.22	novel	2670	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_4	216.60721684776	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCTTATCCCTTTTCAAA	28	False	NA	-7	True	AATAAA	-20	NA	86195472	86143931	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_86144882_86146067_86146198_86147701_86147834_86151296_86151521_86158591_86158722_86159535_86159672_86161975_86162080_86166507_86166645_86170748_86170842_86171207_86171346_86173649_86173762_86179432_86179623_86181298_86181373_86195337
H1_mix_00051596	chr2	-	2688	14	NIC	ENSG00000132305.22	novel	2670	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_4	191.738264647872	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCTTATCCCTTTTCAAA	28	False	NA	-7	True	AATAAA	-20	NA	86195472	86143931	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_86144882_86146067_86146198_86147701_86147834_86151296_86151521_86158591_86158722_86159535_86159672_86161975_86162080_86166507_86166645_86170748_86170845_86171207_86171346_86173649_86173762_86179432_86179623_86181298_86181373_86195337
H1_mix_00051597	chr2	-	2701	15	FSM	ENSG00000132305.22	ENST00000410111.8	2689	15	0	-12	0	8	multi-exon	FALSE	canonical	1	131	junction_5	186.146146226834	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCTTTTCAAAAAGTACAG	-27	True	NA	1	True	AATAAA	-28	NA	86195462	86143923	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_86144882_86146067_86146198_86147701_86147834_86151296_86151521_86153559_86153575_86158591_86158722_86159535_86159672_86161975_86162080_86166507_86166645_86170748_86170845_86171207_86171346_86173649_86173762_86179432_86179623_86181298_86181373_86195337
H1_mix_00051598	chr2	-	2663	14	NIC	ENSG00000132305.22	novel	2670	15	NA	NA	0	8	combination_of_known_splicesites	FALSE	canonical	3	5	junction_4	192.034297972089	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCTTTTCAAAAAGTACAG	28	False	NA	1	True	AATAAA	-28	NA	86195472	86143923	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_86144882_86146067_86146198_86147701_86147834_86151296_86151521_86158591_86158722_86159535_86159672_86161975_86162080_86166507_86166645_86170748_86170845_86171207_86171313_86173649_86173762_86179432_86179623_86181298_86181373_86195337
H1_mix_00051599	chr2	-	3857	7	FSM	ENSG00000068615.20	ENST00000165698.9	3857	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	3.33749739908346	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTTGTAATGTTGGGCT	17	True	NA	NA	False	AATAAA	-26	NA	86337654	86213992	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_86217111_86232624_86232803_86251956_86252071_86254693_86254815_86263964_86264042_86282169_86282243_86337478
H1_mix_00051603	chr2	-	540	4	NIC	ENSG00000115561.16	novel	436	3	NA	NA	32	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	71.1867653117878	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGAAGCTCCTTTAATACA	11	True	NA	NA	False	TATAAA	-19	NA	86563408	86527047	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_86527242_86529217_86529398_86542251_86542313_86563303
H1_mix_00051605	chr2	-	3482	4	FSM	ENSG00000239305.7	ENST00000237455.5	3482	4	0	0	0	0	multi-exon	FALSE	canonical	2	38	junction_3	10.077477638554	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTACAGATTTTCCAATGT	-2	True	NA	NA	False	AATAAA	-18	NA	86623865	86603397	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_86605419_86612158_86612275_86620329_86620470_86622660
H1_mix_00051610	chr2	-	312	3	FSM	ENSG00000230395.1	ENST00000426110.1	312	3	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_2	2.5	314	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTACCCACTCACCCT	NA	False	NA	NA	False	NA	NA	NA	87120980	87118533	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_87118618_87118791_87118927_87120887
H1_mix_00051611	chr2	-	867	2	NNC	ENSG00000287763.1	novel	1417	3	NA	NA	-459	-33465	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_1	0	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTTGTATGTTTACTTA	-15	True	NA	NA	False	ATTAAA	-30	NA	87349187	87344924	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_87345263_87348658
H1_mix_00051612	chr2	-	527	2	NNC	ENSG00000287763.1	novel	1417	3	NA	NA	-188	-33474	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAAAAAAGCTTCTTGTAT	256	False	NA	NA	False	ATTAAA	-21	NA	87348916	87344933	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_87345203_87348658
H1_mix_00051613	chr2	-	6952	23	FSM	ENSG00000185304.16	ENST00000398146.5	6770	23	-177	-5	-177	5	multi-exon	FALSE	canonical	3	46	junction_15	41.8741966741744	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGTGAATCATTTAAAAAATT	NA	False	NA	NA	False	ATTAAA	-20	NA	87825973	87755954	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_87757427_87772168_87772365_87774943_87775084_87782123_87784348_87785074_87785170_87788721_87788840_87791989_87792074_87792161_87792342_87793221_87793369_87793630_87793769_87794034_87794194_87795116_87795241_87795407_87795584_87795666_87795849_87797964_87798175_87800604_87800693_87806695_87806892_87811484_87811631_87811975_87812207_87816268_87816422_87816865_87816978_87818558_87818624_87825657
H1_mix_00051614	chr2	-	6610	22	NIC	ENSG00000185304.16	novel	6770	23	NA	NA	13	-1	combination_of_known_splicesites	FALSE	canonical	3	29	junction_17	44.599401071805	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAACGTGAATCATTTAA	12	False	NA	NA	False	ATTAAA	-14	NA	87825783	87755960	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_87757427_87772168_87772365_87774943_87775084_87782123_87784348_87785074_87785170_87788721_87788840_87791989_87792074_87792161_87792342_87793221_87793369_87793630_87793769_87794034_87794194_87795116_87795241_87795407_87795584_87795666_87795849_87797964_87798175_87800604_87800693_87806695_87806892_87811975_87812207_87816268_87816422_87816865_87816978_87818558_87818624_87825657
H1_mix_00051617	chr2	-	3414	3	NNC	ENSG00000214336.5	novel	2841	2	NA	NA	-52	1962	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.5	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGCTTCCTGGGTATT	-3	True	NA	-17	True	AATAAA	-16	NA	88452745	88444824	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_88445460_88446900_88448830_88451895
H1_mix_00051619	chr2	-	2192	3	FSM	ENSG00000172071.15	ENST00000682844.1	2192	3	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_2	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAGGTAACAGTTTAATCA	NA	False	NA	NA	False	NA	NA	NA	88570914	88556930	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_88558980_88562288_88562391_88570873
H1_mix_00051620	chr2	-	1212	3	FSM	ENSG00000283196.2	ENST00000636531.1	1196	3	-18	2	-18	-2	multi-exon	FALSE	canonical	3	22	junction_1	40	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGCATGAGTCAGATCC	NA	False	NA	NA	False	ATTAAA	-11	NA	89585633	89542843	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_89543837_89581005_89581141_89585549
H1_mix_00051621	chr2	-	667	3	FSM	ENSG00000283196.2	ENST00000637196.1	774	3	0	107	0	-107	multi-exon	FALSE	canonical	3	18	junction_1	42	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAGAGTGCTGTGTGGT	NA	False	NA	NA	False	NA	NA	NA	89585596	89562199	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_89562685_89581005_89581141_89585549
H1_mix_00051623	chr2	-	857	2	Intergenic	novelGene_707	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	80	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAATACATTTATTTCTT	NA	False	NA	NA	False	TTTAAA	-1	NA	90245557	90241305	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_-_90241609_90245003
H1_mix_00051627	chr2	-	3245	12	FSM	ENSG00000144029.12	ENST00000272418.7	3298	12	0	53	0	-53	multi-exon	TRUE	canonical	3	502	junction_5	73.6059420885556	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATGAACTTTAAGCAATAA	0	True	NA	NA	False	TATAAA	-3	NA	95121808	95085421	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_95087582_95090385_95090523_95100473_95100537_95100836_95100895_95101676_95101724_95104639_95104731_95106422_95106458_95108174_95108409_95109915_95110042_95115065_95115204_95117864_95117946_95121733
H1_mix_00051628	chr2	-	1359	11	FSM	ENSG00000144029.12	ENST00000345084.9	1359	11	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_5	178.646046695694	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTTGAGCACATGTTAT	9	True	NA	-19	True	AATAAA	-15	NA	95121799	95087207	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_95087582_95090385_95090523_95100473_95100537_95100836_95100895_95101676_95101724_95106422_95106458_95108174_95108409_95109915_95110042_95115065_95115204_95117864_95117946_95121733
H1_mix_00051631	chr2	-	5593	3	FSM	ENSG00000144026.12	ENST00000496060.1	5593	3	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTACACATATACCAACC	9974	False	NA	-13	True	AATAAA	-18	NA	95155691	95147329	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_95150268_95152673_95152770_95153132
H1_mix_00051633	chr2	-	4661	2	FSM	ENSG00000232931.6	ENST00000663557.1	4643	2	0	-18	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTGGTGGTTGTTTTT	8930	False	NA	NA	False	ATTAAA	-29	NA	95818459	95807051	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_95807303_95814049
H1_mix_00051634	chr2	-	759	3	FSM	ENSG00000174501.15	ENST00000619511.1	737	3	0	-22	0	22	multi-exon	FALSE	canonical	3	12	junction_2	7	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATTTTGGAACTTTTAAA	104	False	NA	NA	False	AATGAA	-39	NA	95991831	95986600	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_95986925_95987091_95987207_95991511
H1_mix_00051635	chr2	-	3699	1	FSM	ENSG00000274286.2	ENST00000620793.2	3696	1	0	-3	0	3	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTGTCCTTGTTGCCCA	-1	True	NA	47	True	AATAAA	-20	NA	96116571	96112872	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_96112900_96116600
H1_mix_00051637	chr2	-	1692	4	FSM	ENSG00000158050.5	ENST00000288943.5	1685	4	0	-7	0	7	multi-exon	FALSE	canonical	3	63	junction_1	12.4721912892465	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCTGGTCTCATCTGATA	-1	True	NA	1	True	AATAAA	-31	NA	96145440	96143161	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_96144038_96144153_96144374_96144760_96144883_96144966
H1_mix_00051638	chr2	-	3377	8	FSM	ENSG00000084090.14	ENST00000337288.10	3377	8	0	0	0	0	multi-exon	FALSE	canonical	3	1891	junction_3	108.927049169691	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGTCTTTGGACAAAT	-3	True	NA	-39	True	AATAAA	-26	NA	96208827	96184858	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_96186915_96187216_96187302_96192368_96192469_96193077_96193161_96193241_96193353_96194957_96195008_96195340_96195550_96208144
H1_mix_00051639	chr2	-	615	2	FSM	ENSG00000084090.14	ENST00000495687.1	274	2	2	-343	2	288	multi-exon	FALSE	canonical	3	2225	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCATTTTTAATTAATTC	9741	False	NA	NA	False	NA	NA	NA	96195007	96192787	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_96193353_96194957
H1_mix_00051640	chr2	-	4883	33	NNC	ENSG00000144028.15	novel	7194	45	NA	NA	-5496	58799	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	258.632867132036	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTTAGCAGTGGAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	96295351	96215538	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_96215573_96274731_96275156_96275256_96275350_96276903_96276986_96277080_96277242_96277538_96277716_96277806_96277951_96278236_96278359_96278546_96278712_96278808_96278999_96279450_96279560_96281813_96281923_96283200_96283353_96283534_96283714_96283812_96284005_96284357_96284586_96285179_96285341_96286310_96286485_96286687_96286878_96287005_96287161_96287438_96287558_96287862_96287970_96288662_96288747_96289036_96289118_96289226_96289380_96289798_96289997_96290325_96290515_96290683_96290816_96291391_96291503_96291750_96291901_96292971_96293096_96293315_96293479_96295320
H1_mix_00051644	chr2	-	7196	45	FSM	ENSG00000144028.15	ENST00000323853.10	7194	45	0	-2	0	2	multi-exon	FALSE	canonical	3	592	junction_38	143.400107772243	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCCGACTGTCTTCAAAT	-4	True	NA	-6	True	AATAAA	-19	NA	96305546	96274335	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_96275156_96275256_96275350_96276903_96276986_96277080_96277242_96277538_96277716_96277806_96277951_96278236_96278359_96278546_96278712_96278808_96278999_96279450_96279560_96281813_96281923_96283200_96283353_96283534_96283714_96283812_96284005_96284357_96284586_96285179_96285341_96286310_96286485_96286687_96286878_96287005_96287161_96287438_96287558_96287862_96287970_96288662_96288747_96289036_96289118_96289226_96289380_96289798_96289997_96290325_96290515_96290683_96290816_96291391_96291503_96291750_96291901_96292971_96293096_96293315_96293510_96295487_96295659_96296535_96296692_96296932_96297071_96297362_96297537_96297636_96297721_96298283_96298421_96298602_96298703_96298814_96298968_96299328_96299428_96300997_96301054_96301523_96301717_96303158_96303331_96304704_96304869_96305392
H1_mix_00051649	chr2	-	5252	21	FSM	ENSG00000114982.19	ENST00000354204.10	5253	21	0	1	0	-1	multi-exon	FALSE	canonical	3	40	junction_19	27.6113654135394	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGATTGCTTCAGCTTC	-1	True	NA	-14	True	ATTAAA	-16	NA	96638346	96593170	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_96595632_96601642_96601777_96602115_96602339_96602752_96602863_96604249_96604381_96604778_96604864_96605319_96605512_96608507_96608665_96608863_96609065_96609498_96609563_96610725_96610884_96611063_96611139_96612281_96612354_96612461_96612564_96612817_96612935_96613487_96613620_96619358_96619545_96619671_96619763_96631311_96631544_96636920_96637186_96638282
H1_mix_00051650	chr2	-	4937	20	FSM	ENSG00000114982.19	ENST00000487070.5	4937	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	56.3997406724751	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGGATTGCTTCAGCTT	353	False	NA	-15	True	ATTAAA	-15	NA	96638020	96593171	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_96595632_96601642_96601777_96602752_96602863_96604249_96604381_96604778_96604864_96605319_96605512_96608507_96608665_96608863_96609065_96609498_96609563_96610725_96610884_96611063_96611139_96612281_96612354_96612461_96612564_96612817_96612935_96613487_96613620_96615491_96615545_96619358_96619545_96631311_96631483_96636920_96637186_96637948
H1_mix_00051651	chr2	-	5156	21	FSM	ENSG00000114982.19	ENST00000431828.6	5156	21	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_19	24.0093731696602	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGGATTGCTTCAGCTT	-8	True	NA	-15	True	ATTAAA	-15	NA	96638312	96593171	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_96595632_96601642_96601777_96602115_96602339_96602752_96602863_96604249_96604381_96604778_96604864_96605319_96605512_96608507_96608665_96608863_96609065_96609498_96609563_96610725_96610884_96611063_96611139_96612281_96612354_96612461_96612564_96612817_96612935_96613487_96613620_96619358_96619545_96619671_96619763_96631311_96631483_96636920_96637186_96638282
H1_mix_00051652	chr2	-	5205	21	NIC	ENSG00000114982.19	novel	5253	21	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_6	35.776353922668	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACATTTGGATTGCTTCA	-6	True	NA	-19	True	ATTAAA	-11	NA	96638310	96593175	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_96595632_96601642_96601777_96602115_96602339_96602752_96602863_96604249_96604381_96604778_96604858_96605319_96605512_96608507_96608665_96608863_96609065_96609498_96609563_96610725_96610884_96611063_96611139_96612281_96612354_96612461_96612564_96612817_96612935_96613487_96613620_96619358_96619545_96619671_96619763_96631311_96631544_96636920_96637186_96638282
H1_mix_00051653	chr2	-	356	2	FSM	ENSG00000114982.19	ENST00000484020.1	438	2	82	0	82	0	multi-exon	FALSE	canonical	3	172	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACCATTAGGTTAGGTG	8120	False	NA	NA	False	NA	NA	NA	96601829	96595462	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_96595632_96601642
H1_mix_00051656	chr2	-	2410	9	FSM	ENSG00000114988.12	ENST00000434524.5	2410	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_6	81.9569246616782	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCTGTAGCCTAAATGAAA	17	True	NA	-50	True	NA	NA	NA	96740041	96705974	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_96707399_96707713_96707834_96711655_96711771_96711863_96712026_96733518_96733602_96734408_96734527_96737136_96737218_96737948_96738068_96739853
H1_mix_00051659	chr2	-	897	4	FSM	ENSG00000213337.9	ENST00000393537.5	892	4	0	-5	0	5	multi-exon	FALSE	canonical	3	288	junction_3	38.1430057663117	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATGTAAGTATTAGAAGAA	2	True	NA	-2	True	ATTAAA	-24	NA	96858016	96847984	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_96848445_96853400_96853605_96854337_96854442_96857887
H1_mix_00051660	chr2	-	3716	15	NIC	ENSG00000168758.11	novel	3652	15	NA	NA	0	96	combination_of_known_splicesites	TRUE	canonical	3	28	junction_14	93.2166666362594	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTTTGTGGTCCCTGCC	3	True	NA	92	True	NA	NA	NA	96868588	96859621	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_96861456_96861578_96861650_96861736_96861895_96863681_96863795_96863925_96864149_96864237_96864383_96864704_96864881_96864963_96865116_96865203_96865321_96865440_96865538_96865665_96865765_96865866_96865930_96866282_96866432_96867777_96867924_96868415
H1_mix_00051661	chr2	-	3996	15	NIC	ENSG00000168758.11	novel	3652	15	NA	NA	-245	96	combination_of_known_splicesites	FALSE	canonical	3	47	junction_14	88.8719842910956	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTTTGTGGTCCCTGCC	773	False	NA	92	True	NA	NA	NA	96870325	96859621	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_96861456_96861578_96861650_96861736_96861895_96863681_96863795_96863925_96864149_96864237_96864383_96864704_96864881_96864963_96865116_96865203_96865321_96865440_96865538_96865665_96865765_96865866_96865930_96866282_96866432_96867777_96867927_96869875
H1_mix_00051662	chr2	-	3800	13	FSM	ENSG00000168758.11	ENST00000482925.5	3776	13	0	-24	0	0	multi-exon	FALSE	canonical	3	302	junction_8	43.7292014054174	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTGGGCTAAAGCCTT	4168	False	NA	-4	True	AATAAA	-37	NA	96866930	96859717	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_96861456_96861578_96861650_96861736_96861895_96863681_96863795_96863925_96864149_96864237_96864383_96864704_96864881_96864963_96865116_96865203_96865321_96865440_96865538_96865665_96865765_96865866_96865930_96866282
H1_mix_00051663	chr2	-	3728	15	NNC	ENSG00000168758.11	novel	3652	15	NA	NA	616	0	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_14	85.9332916409287	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTGGGCTAAAGCCTT	-32	True	NA	-4	True	AATAAA	-37	NA	96869464	96859717	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_96861456_96861578_96861650_96861736_96861895_96863681_96863795_96863925_96864149_96864237_96864383_96864704_96864881_96864963_96865116_96865203_96865321_96865440_96865538_96865665_96865765_96865866_96865930_96866282_96866432_96867777_96867927_96869186
H1_mix_00051664	chr2	-	3652	15	FSM	ENSG00000168758.11	ENST00000305476.10	3652	15	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_14	71.9889447294882	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTGGGCTAAAGCCTT	-9	True	NA	-4	True	AATAAA	-37	NA	96870080	96859717	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_96861456_96861578_96861650_96861736_96861895_96863681_96863795_96863925_96864149_96864237_96864383_96864704_96864881_96864963_96865116_96865203_96865321_96865440_96865538_96865665_96865765_96865866_96865930_96866282_96866432_96867777_96867924_96869875
H1_mix_00051665	chr2	-	3384	3	FSM	ENSG00000168758.11	ENST00000467747.1	3371	3	0	-13	0	1	multi-exon	FALSE	canonical	3	398	junction_1	35	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCTGATGGGGCTAAGAT	7770	False	NA	-21	True	AATAAA	-20	NA	96863328	96859734	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_96861456_96861578_96861650_96861736
H1_mix_00051666	chr2	-	3696	15	NNC	ENSG00000168758.11	novel	3652	15	NA	NA	627	0	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_14	85.2594180565815	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTCTGATGGGGCTAAGA	-21	True	NA	-22	True	AATAAA	-19	NA	96869453	96859735	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_96861456_96861578_96861650_96861736_96861895_96863681_96863795_96863925_96864149_96864237_96864383_96864704_96864881_96864963_96865116_96865203_96865321_96865440_96865538_96865665_96865765_96865866_96865930_96866282_96866432_96867777_96867924_96869186
H1_mix_00051669	chr2	-	1431	9	FSM	ENSG00000144199.12	ENST00000414820.6	1431	9	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_8	62.3533278983568	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGCTTGTGCTGTTTGT	NA	False	NA	-2	True	AATAAA	-21	NA	97094882	97083582	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_97083818_97083947_97084036_97084168_97084278_97085698_97085862_97086138_97086199_97090108_97090326_97091461_97091713_97091862_97091989_97094700
H1_mix_00051671	chr2	-	1347	5	FSM	ENSG00000196912.13	ENST00000488634.2	1347	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	24.5865817062885	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTCTCCAGGGCACCTG	NA	False	NA	NA	False	NA	NA	NA	97511609	97492665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_97492856_97507035_97507066_97507563_97508066_97509580_97509734_97511137
H1_mix_00051672	chr2	-	3545	11	ISM	ENSG00000196912.13	ENST00000258459.12	5898	44	53566	-18	-24702	18	3prime_fragment	FALSE	canonical	0	0	junction_10	25.5139177705032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCGTGTTTTAAATGATGT	NA	False	NA	NA	False	ATTAAA	-40	NA	97536311	97504779	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_97506436_97507035_97507066_97507563_97507658_97507994_97508066_97509580_97509734_97511137_97512053_97513179_97513364_97515731_97515946_97523325_97523468_97532310_97532385_97536299
H1_mix_00051676	chr2	-	2202	11	FSM	ENSG00000115073.8	ENST00000289228.7	2204	11	0	2	0	-2	multi-exon	TRUE	canonical	3	98	junction_6	15.0083310198036	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCTGTGCTATCGTTTG	-59	True	NA	-3	True	NA	NA	NA	97664044	97655940	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_97656961_97657151_97657193_97657447_97657510_97657942_97658118_97658223_97658317_97658426_97658644_97658878_97659004_97659351_97659478_97660570_97660647_97661881_97661947_97663842
H1_mix_00051677	chr2	-	6704	41	FSM	ENSG00000075568.17	ENST00000186436.10	6701	41	0	-3	0	0	multi-exon	TRUE	canonical	2	55	junction_29	17.7516020403793	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTGTGGTTTTTTTTA	-9	True	NA	-3	True	AATAAA	-21	NA	97995948	97756332	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_97757384_97758892_97759054_97759651_97759750_97760592_97760690_97760792_97760915_97762034_97762201_97766113_97766264_97766477_97766603_97772296_97772425_97775842_97776019_97792385_97792985_97793394_97793554_97794929_97795116_97796217_97796405_97796843_97796987_97797364_97797517_97801894_97801962_97802427_97802538_97802651_97802791_97805087_97805206_97805375_97805452_97805550_97805704_97809687_97809775_97811127_97811233_97812420_97812556_97812638_97812750_97813970_97814142_97814234_97814389_97815198_97815308_97818612_97818722_97833364_97833427_97834620_97834678_97834774_97834926_97837076_97837158_97841814_97841938_97844144_97844262_97859303_97859428_97888051_97888121_97908657_97908699_97927425_97927488_97995475
H1_mix_00051679	chr2	-	1985	3	FSM	ENSG00000183513.9	ENST00000483527.5	770	3	-8	-1207	0	168	multi-exon	FALSE	canonical	0	0	junction_2	268.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGACTGGCTTCTTTC	-27	True	NA	NA	False	NA	NA	NA	98608515	98599145	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_98600794_98604107_98604192_98608262
H1_mix_00051680	chr2	-	4041	1	ISM	ENSG00000071073.13	ENST00000264968.7	8432	15	103506	44	40283	-42	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGAATTCAAGATTCCTT	NA	False	NA	0	True	AATAAA	-17	NA	98623190	98619149	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_98619100_98623200
H1_mix_00051681	chr2	-	2033	2	ISM	ENSG00000071073.13	ENST00000409391.1	2018	16	101008	-1843	37649	1843	3prime_fragment	FALSE	canonical	3	21	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTTTATGTCAGTTAAA	NA	False	NA	NA	False	NA	NA	NA	98625824	98623661	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_98625593_98625722
H1_mix_00051682	chr2	-	1814	15	NNC	ENSG00000071073.13	novel	591	6	NA	NA	-12	-8913	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	7.44126662468103	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTCTGATGAAGGCCCCA	NA	False	NA	NA	False	NA	NA	NA	98731144	98634417	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_98634432_98635221_98635289_98636516_98636596_98639807_98640002_98640120_98640229_98643922_98644054_98645427_98645543_98655444_98655521_98656351_98656466_98658217_98658265_98663045_98663180_98675034_98675176_98678303_98678472_98726238_98726568_98731047
H1_mix_00051684	chr2	-	391	3	FSM	ENSG00000135951.16	ENST00000489348.1	390	3	0	-1	0	0	multi-exon	FALSE	canonical	3	6	junction_2	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTCTCTTTTTCTTA	80	False	NA	0	True	AATAAA	-16	NA	99154861	99148263	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_99148349_99154290_99154428_99154692
H1_mix_00051685	chr2	-	717	2	FSM	ENSG00000158411.11	ENST00000483721.1	714	2	0	-3	0	0	multi-exon	FALSE	canonical	3	402	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGGATCCATCATTCAG	NA	False	NA	0	True	AATAAA	-19	NA	99170905	99169262	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_99169611_99170536
H1_mix_00051686	chr2	-	3270	4	FSM	ENSG00000158411.11	ENST00000464685.1	3270	4	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_2	40.9986449640581	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGGATCCATCATTCAG	76	False	NA	0	True	AATAAA	-19	NA	99180962	99169262	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_99169611_99170536_99170653_99171342_99174017_99180830
H1_mix_00051687	chr2	-	939	7	FSM	ENSG00000158411.11	ENST00000289359.6	939	7	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_4	39.7090110120556	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGGATCCATCATTCAG	-20	True	NA	0	True	AATAAA	-19	NA	99181058	99169262	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_99169471_99169549_99169611_99170536_99170653_99171342_99171430_99171509_99171647_99173914_99174017_99180830
H1_mix_00051690	chr2	-	1508	5	FSM	ENSG00000115514.12	ENST00000264255.8	1508	5	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_1	81.8882622846522	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTTTTTCAAGAAAGTCAA	0	True	NA	32	True	CATAAA	-20	NA	99336333	99318981	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_99319800_99321954_99322210_99327534_99327654_99333021_99333243_99336238
H1_mix_00051692	chr2	-	1099	4	FSM	ENSG00000115514.12	ENST00000463385.5	1099	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	282.762955298053	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAAAGCAGACTCTTGC	23	True	NA	-30	True	AATAAA	-1	NA	99336310	99321560	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_99322210_99327534_99327654_99332983_99333243_99336238
H1_mix_00051693	chr2	-	4686	23	FSM	ENSG00000135945.10	ENST00000393445.7	4686	23	0	0	0	0	multi-exon	TRUE	canonical	3	45	junction_15	27.4634618272568	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTAGTGGATATTTGGAAC	35	True	NA	1	True	AATAAA	-18	NA	99489973	99400474	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_99401353_99402243_99402347_99402643_99402801_99402888_99403107_99403694_99403816_99404443_99404678_99405909_99406107_99406324_99406491_99408028_99408132_99410694_99410868_99412730_99412952_99418827_99418948_99421498_99421654_99424151_99424281_99429839_99429946_99434331_99434449_99435833_99435942_99438600_99439311_99442316_99442470_99449335_99449505_99462495_99462623_99464921_99464986_99489816
H1_mix_00051695	chr2	-	4727	23	FSM	ENSG00000135945.10	ENST00000413697.5	4727	23	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_20	42.578973781251	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTACAGGCTCCTTT	-27	True	NA	-14	True	AATAAA	-13	NA	99490035	99400949	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_99401353_99402243_99402801_99402888_99403107_99403694_99403816_99404443_99404678_99405909_99406107_99406324_99406491_99408028_99408132_99410694_99410868_99412730_99412952_99418827_99418948_99421498_99421654_99424151_99424281_99429839_99429946_99434331_99434449_99435833_99435942_99438600_99439311_99442316_99442470_99449335_99449505_99451344_99451502_99462495_99462623_99464921_99464986_99489816
H1_mix_00051697	chr2	-	2854	7	FSM	ENSG00000115526.11	ENST00000264249.8	2854	7	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_6	29.3995464817628	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGCTGCGGTTCTGGGA	-22	True	NA	-4	True	AATAAA	-20	NA	100417668	100391859	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_100393783_100395508_100395615_100397907_100398143_100402563_100402656_100406575_100406708_100415040_100415112_100417373
H1_mix_00051702	chr2	-	3511	20	FSM	ENSG00000204634.13	ENST00000376840.8	3627	20	-213	329	-84	-329	multi-exon	FALSE	canonical	3	44	junction_1	8.88679184250861	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTTTGAAAAGCCACTG	NA	False	NA	NA	False	NA	NA	NA	101151466	101007945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_101008274_101010928_101011027_101011450_101011541_101021680_101021747_101022280_101022522_101027382_101027452_101028047_101028147_101028302_101028433_101029490_101029777_101032267_101032386_101033543_101033759_101036017_101036169_101037531_101037709_101038460_101038656_101040177_101040386_101050400_101050642_101054107_101054337_101059420_101059540_101090253_101090365_101151126
H1_mix_00051705	chr2	-	518	2	Intergenic	novelGene_711	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACATTGGGTGGTCTATG	-14	True	NA	NA	False	AATAAA	-21	NA	101252676	101250581	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_-_101250908_101252484
H1_mix_00051707	chr2	-	208	1	FSM	ENSG00000212283.1	ENST00000390981.1	114	1	0	-94	0	94	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTGTCCCCATATACTG	3726	False	NA	NA	False	AATAGA	-14	NA	101273049	101272841	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_101272800_101273000
H1_mix_00051708	chr2	-	3088	7	FSM	ENSG00000163162.9	ENST00000295317.4	2953	7	0	-135	0	135	multi-exon	FALSE	canonical	3	100	junction_6	12.4420880705594	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CGTCTCAAAAAAAAAAAAAA	146	False	101308719	NA	False	NA	NA	NA	101308701	101275465	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_101277282_101281858_101282058_101286080_101286178_101288972_101289056_101294013_101294083_101294930_101295182_101308128
H1_mix_00051713	chr2	-	1910	7	NIC	ENSG00000135953.11	novel	2990	7	NA	NA	13	-2	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	29.3806436658937	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTGGTGTTTCATTTT	-3	True	NA	-1	True	ATTAAA	-14	NA	102736865	102715841	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_102716042_102718189_102719208_102723699_102723910_102726844_102726975_102731024_102731069_102732321_102732410_102736645
H1_mix_00051714	chr2	-	2990	7	FSM	ENSG00000135953.11	ENST00000438943.5	2990	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	30.3589635308366	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTCCTTTATTTTTAGT	-16	True	NA	NA	False	AAAAAG	-3	NA	102736878	102717037	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_102719208_102723699_102723910_102726844_102726975_102731024_102731069_102732023_102732139_102732321_102732410_102736645
H1_mix_00051718	chr2	-	5703	12	FSM	ENSG00000135966.13	ENST00000393359.7	5680	12	0	-23	0	0	multi-exon	FALSE	canonical	3	77	junction_11	25.7726871893227	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCTAGTCTAAATAAAGAGT	-21	True	NA	-4	True	AATAAA	-39	NA	105329735	105264390	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_105267560_105269271_105269706_105272854_105273015_105273543_105273691_105275559_105275704_105277613_105277672_105280381_105280724_105284315_105284399_105296355_105296511_105298510_105298706_105307613_105308319_105329624
H1_mix_00051719	chr2	-	1606	8	NNC	ENSG00000115641.19	novel	1876	8	NA	NA	0	60955	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	57.5223115541319	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGCAAAAAAAGAAAGCAAGA	-3	True	NA	NA	False	AGTAAA	-25	NA	105399050	105296756	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_105296785_105360828_105361435_105363284_105363472_105367569_105367740_105373558_105373734_105386360_105386541_105396646_105396698_105398841
H1_mix_00051722	chr2	-	1596	7	FSM	ENSG00000115641.19	ENST00000530340.6	1582	7	0	-14	0	0	multi-exon	FALSE	canonical	3	31	junction_6	47.6471405228058	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGTGTGAAATCATGATT	-4	True	NA	0	True	AATAAA	-31	NA	105399051	105360811	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_105361435_105363284_105363472_105367569_105367740_105373558_105373734_105386360_105386541_105396646_105396698_105398841
H1_mix_00051723	chr2	-	1478	7	FSM	ENSG00000115641.19	ENST00000322142.13	1478	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	50.8748464371147	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGTGTGAAATCATGATT	1278	False	NA	0	True	AATAAA	-31	NA	105399061	105360811	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_105361435_105363284_105363472_105367569_105367740_105373558_105373734_105386360_105386541_105396646_105396698_105398969
H1_mix_00051724	chr2	-	1371	6	FSM	ENSG00000115641.19	ENST00000408995.5	1367	6	0	-4	0	0	multi-exon	FALSE	canonical	3	49	junction_5	37.3127324113365	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACTTGCAATAAAGTTAT	-3	True	NA	-45	True	NA	NA	NA	105399050	105360856	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_105361435_105363284_105363472_105367569_105367740_105373558_105373734_105386360_105386541_105398969
H1_mix_00051725	chr2	-	2907	4	FSM	ENSG00000115652.15	ENST00000497604.1	2907	4	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_2	13.9283882771841	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGACTTCCAGTTTTAAAG	NA	False	NA	-16	True	AATAAA	-20	NA	106102952	106093307	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_106094158_106096717_106096822_106098715_106098774_106101057
H1_mix_00051727	chr2	-	2124	15	FSM	ENSG00000115652.15	ENST00000283148.12	2053	15	-48	-23	-48	20	multi-exon	FALSE	canonical	3	94	junction_13	87.4270541418294	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTTTCTGCTTCGGCA	NA	False	NA	4	True	AATAAA	-40	NA	106194349	106093287	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_106094158_106096717_106096822_106098715_106098774_106101057_106101119_106104793_106104838_106112645_106112766_106122969_106123092_106125619_106125680_106129673_106129779_106145189_106145371_106158057_106158119_106163666_106163711_106164735_106164800_106166055_106166084_106194147
H1_mix_00051728	chr2	-	2020	14	NIC	ENSG00000115652.15	novel	2053	15	NA	NA	-48	20	combination_of_known_splicesites	FALSE	canonical	3	53	junction_1	126.724646753008	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTTTCTGCTTCGGCA	NA	False	NA	4	True	AATAAA	-40	NA	106194349	106093287	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_106094158_106098715_106098774_106101057_106101119_106104793_106104838_106112645_106112766_106122969_106123092_106125619_106125680_106129673_106129779_106145189_106145371_106158057_106158119_106163666_106163711_106164735_106164800_106166055_106166084_106194147
H1_mix_00051730	chr2	-	316	1	ISM	ENSG00000153165.19	ENST00000409886.4	7215	23	63381	1311	63294	-1311	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCGTTTGAGGCTAGTGAG	NA	False	NA	NA	False	NA	NA	NA	106405032	106404716	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_106404700_106405000
H1_mix_00051731	chr2	-	908	3	ISM	ENSG00000153165.19	ENST00000409886.4	7215	23	44646	9837	44559	-9837	internal_fragment	FALSE	canonical	3	23	junction_1	29	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGGTGTCTGCAGCTAAC	NA	False	NA	NA	False	NA	NA	NA	106423767	106413242	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_106413286_106415849_106415990_106423042
H1_mix_00051734	chr2	-	7102	6	NNC	ENSG00000144057.16	novel	6857	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	18	junction_5	8.9977775033616	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTGTTTTAATTCGTA	6	True	NA	0	True	AATAAA	-23	NA	106887107	106801599	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_106806950_106830065_106830241_106832564_106832667_106834048_106834147_106843034_106844035_106886730
H1_mix_00051735	chr2	-	7740	6	FSM	ENSG00000144057.16	ENST00000409382.8	6800	6	-940	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	10.3537432844358	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTGTTTTAATTCGTA	6	True	NA	0	True	AATAAA	-23	NA	106887107	106801599	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_106806950_106830065_106830241_106832564_106832667_106834048_106834147_106843034_106844035_106886092
H1_mix_00051736	chr2	-	6857	6	FSM	ENSG00000144057.16	ENST00000361686.8	6857	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_5	13.230268326833	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTGTTTTAATTCGTA	6	True	NA	0	True	AATAAA	-23	NA	106887107	106801599	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_106806950_106830065_106830241_106832564_106832667_106834048_106834147_106843034_106844035_106886975
H1_mix_00051737	chr2	-	532	1	FSM	ENSG00000259863.1	ENST00000567491.1	1604	1	97	975	97	-975	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTGAATTCGCGCTCTCC	NA	False	NA	NA	False	NA	NA	NA	109128833	109128301	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_109128300_109128800
H1_mix_00051738	chr2	-	3014	11	FSM	ENSG00000186522.15	ENST00000397712.7	3014	11	0	0	0	0	multi-exon	FALSE	canonical	1	157	junction_2	86.6835624556351	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATCTGTATACTTTAAAT	-35	True	NA	-36	True	AATAAA	-17	NA	109613966	109542798	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_109544325_109546049_109546238_109553086_109553220_109564365_109564535_109565762_109565860_109567814_109567977_109574580_109574768_109585125_109585322_109585720_109585839_109593050_109593120_109613797
H1_mix_00051739	chr2	-	2723	10	FSM	ENSG00000186522.15	ENST00000397714.6	2719	10	0	-4	0	0	multi-exon	FALSE	canonical	1	38	junction_9	139.558651770324	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTAATTTTCCTTTCT	4	True	NA	NA	False	AATAAA	-44	NA	109613927	109542981	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_109544325_109546049_109546238_109553086_109553220_109564365_109564535_109565762_109565860_109567814_109567977_109574580_109574768_109585125_109585322_109585720_109585839_109613797
H1_mix_00051740	chr2	-	1605	10	FSM	ENSG00000186522.15	ENST00000415095.5	1605	10	0	0	0	0	multi-exon	FALSE	canonical	1	157	junction_1	87.7599137940313	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATCACAGTGTGAAAAGG	370	False	NA	NA	False	AATAAA	-3	NA	109613835	109545801	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_109546238_109553086_109553220_109564365_109564535_109565762_109565860_109567814_109567977_109574580_109574768_109585125_109585322_109585720_109585839_109593050_109593120_109613797
H1_mix_00051745	chr2	-	2522	20	FSM	ENSG00000144061.14	ENST00000445609.7	2522	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	22.02152057468	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAAGTTAAAGTGATCCA	-14	True	NA	NA	False	AATAAA	-20	NA	110205013	110123347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_110124064_110125636_110125682_110129185_110129260_110131678_110131792_110143541_110143642_110144492_110144570_110146752_110146836_110147915_110148027_110150181_110150257_110160126_110160256_110161602_110161698_110163047_110163136_110164687_110164731_110165051_110165156_110168451_110168554_110169805_110169999_110178422_110178548_110179623_110179685_110201420_110201495_110204899
H1_mix_00051746	chr2	-	3822	19	FSM	ENSG00000144061.14	ENST00000461707.5	3822	19	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_11	21.1666666666667	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGTTATATCTAAATTTA	-2	True	NA	NA	False	AATAAA	-14	NA	110205001	110123587	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_110124064_110125636_110125682_110129185_110129260_110131678_110131792_110143541_110143642_110144492_110144570_110146752_110146836_110147915_110148027_110150181_110150257_110160126_110160256_110161602_110161698_110163047_110164731_110165051_110165156_110168451_110168554_110169805_110169999_110178422_110178548_110179623_110179685_110201420_110201495_110204899
H1_mix_00051749	chr2	-	742	4	FSM	ENSG00000144061.14	ENST00000418527.1	742	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	13.7679176187089	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGAGTGTGGTGACTCAT	0	True	NA	NA	False	CATAAA	-25	NA	110204999	110178040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_110178548_110179623_110179685_110201420_110201495_110204899
H1_mix_00051750	chr2	-	390	4	NIC	ENSG00000144061.14	novel	486	5	NA	NA	-4	-4	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	31.6262900483478	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGTGGTATAATTTTATT	23	True	NA	NA	False	AATAAA	-14	NA	110204976	110178757	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_110178936_110179623_110179685_110201420_110201495_110204899
H1_mix_00051753	chr2	-	243	5	ISM	ENSG00000256671.7	ENST00000632897.2	2091	10	20940	992	20940	-235	3prime_fragment	FALSE	canonical	0	0	junction_1	20.3776838723148	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATTGACCTAAAGCCAG	NA	False	NA	NA	False	NA	NA	NA	110451876	110446874	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_110446887_110447084_110447161_110449818_110449868_110451160_110451254_110451863
H1_mix_00051755	chr2	-	7305	23	FSM	ENSG00000183054.12	ENST00000329516.8	7305	23	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_22	57.3380579768968	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACTGTCTCTTTGGGGTT	NA	False	NA	NA	False	ATTAAA	-34	NA	110577222	110513801	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_110515646_110523495_110523698_110526264_110526405_110533464_110535689_110536415_110536511_110540054_110540191_110543358_110543443_110543535_110543716_110544659_110544807_110545068_110545207_110545472_110545632_110546553_110546678_110546844_110547021_110547103_110547286_110549392_110549603_110551723_110551812_110557851_110558048_110562611_110562758_110563102_110563334_110567375_110567529_110567963_110568076_110569656_110569725_110576952
H1_mix_00051756	chr2	-	8537	24	NNC	ENSG00000183054.12	novel	7305	23	NA	NA	-33844	1288	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_23	75.0201737203291	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGGAAGACTTCTGCT	NA	False	NA	NA	False	ATTAAA	-21	NA	110611066	110512513	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_110515646_110523495_110523698_110526264_110526405_110533464_110535689_110536415_110536511_110540054_110540191_110543358_110543443_110543535_110543716_110544659_110544807_110545068_110545207_110545472_110545632_110546553_110546678_110546844_110547021_110547103_110547286_110549392_110549603_110551723_110551812_110557851_110558048_110562611_110562758_110563102_110563334_110567375_110567529_110567963_110568076_110569656_110569725_110610714_110610844_110610981
H1_mix_00051759	chr2	-	5512	25	FSM	ENSG00000169679.15	ENST00000302759.11	3762	25	35	-1785	0	1785	multi-exon	FALSE	canonical	2	632	junction_18	130.627412258428	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGCCCATGCCTGTGTC	34	False	NA	NA	False	NA	NA	NA	110678028	110635742	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_110638160_110639741_110639849_110641033_110641206_110641306_110641465_110641641_110641804_110642118_110642235_110649233_110649378_110650545_110650785_110653435_110653524_110655738_110655917_110657035_110657118_110657545_110657646_110658409_110658521_110658613_110658743_110659977_110660037_110661581_110661842_110666262_110666415_110667520_110667706_110667796_110667850_110669452_110669554_110670524_110670569_110672660_110672858_110674085_110674225_110674305_110674366_110677969
H1_mix_00051763	chr2	-	410	2	FSM	ENSG00000172965.17	ENST00000674026.1	419	2	19	-10	19	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGCTTATTAGCTATC	NA	False	NA	0	True	ATTAAA	-23	NA	111462712	111429308	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_111429621_111462614
H1_mix_00051764	chr2	-	514	2	FSM	ENSG00000172965.17	ENST00000409569.2	514	2	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGCTTATTAGCTATC	NA	False	NA	0	True	ATTAAA	-23	NA	111495086	111429308	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_111429621_111494884
H1_mix_00051765	chr2	-	7762	48	FSM	ENSG00000153107.13	ENST00000341068.8	7762	48	0	0	0	0	multi-exon	TRUE	canonical	3	271	junction_33	76.1552047499217	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTTGTTTGCACACATAT	-18	True	NA	-3	True	AATAAA	-18	NA	111884193	111767639	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_111769407_111772340_111772476_111776858_111777058_111778674_111778771_111780298_111780386_111782368_111782508_111783896_111783965_111784322_111784401_111785359_111785478_111788233_111788321_111792361_111792556_111794077_111794132_111794232_111794324_111794817_111794895_111800796_111800872_111802427_111802507_111803447_111803531_111803704_111803840_111805801_111805894_111808946_111809182_111815369_111815642_111818839_111818959_111821238_111821454_111822421_111822601_111824965_111825037_111825130_111825168_111825776_111825856_111831285_111831435_111833219_111833312_111834603_111834873_111838437_111838513_111843411_111843600_111847137_111847199_111847724_111847866_111850775_111850911_111856613_111856680_111856795_111856887_111858305_111858402_111862388_111862599_111863674_111863896_111864805_111864952_111868022_111868097_111872629_111872713_111873307_111873409_111873612_111873665_111878809_111878972_111880612_111880850_111883941
H1_mix_00051766	chr2	-	2472	4	FSM	ENSG00000153107.13	ENST00000462785.1	2755	4	283	0	283	0	multi-exon	FALSE	canonical	3	381	junction_3	71.7232334897293	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTCTTGATGATTGCTT	NA	False	NA	NA	False	AATAAA	-18	NA	111780470	111769064	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_111769407_111772340_111772476_111776858_111777058_111778674
H1_mix_00051767	chr2	-	784	2	FSM	ENSG00000153107.13	ENST00000482177.1	572	2	218	-430	0	430	multi-exon	FALSE	canonical	3	424	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTTTTAACATTTGTG	NA	False	NA	NA	False	NA	NA	NA	111856847	111855947	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_111856680_111856795
H1_mix_00051768	chr2	-	1809	5	FSM	ENSG00000153107.13	ENST00000489177.1	1809	5	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_2	43.1653796461933	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACATTCTGTAATGTTT	NA	False	NA	NA	False	ACTAAA	-9	NA	111884690	111872799	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_111873409_111873612_111873665_111878809_111878972_111880612_111880850_111883941
H1_mix_00051769	chr2	-	1272	2	FSM	ENSG00000153107.13	ENST00000467878.1	580	2	-632	-60	-123	60	multi-exon	FALSE	canonical	3	450	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTCATAGCGACTTATTT	NA	False	NA	NA	False	AATAAA	-25	NA	111884813	111880449	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_111880850_111883941
H1_mix_00051770	chr2	-	1601	9	NNC	ENSG00000144161.14	novel	5892	9	NA	NA	-27	40	at_least_one_novel_splicesite	FALSE	non_canonical	3	69	junction_2	5.59016994374947	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTAGAGTTCGTAACTT	-33	True	NA	-6	True	AATAAA	-32	NA	112255087	112215864	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_112216469_112230902_112230951_112231837_112231946_112233257_112233372_112234119_112234237_112236561_112236696_112238314_112238529_112250190_112250273_112254907
H1_mix_00051773	chr2	-	472	1	FSM	ENSG00000231747.1	ENST00000443291.1	359	1	-113	0	-113	0	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAACTATTTTAATAAATT	2	True	NA	-45	True	NA	NA	NA	112622280	112621808	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_112621800_112622300
H1_mix_00051774	chr2	-	4751	9	FSM	ENSG00000169607.13	ENST00000302450.11	4723	9	-23	-5	-14	5	multi-exon	FALSE	canonical	3	47	junction_8	2.91279504943276	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTAGAGTTAACTTTACC	-7	True	NA	2	True	AATAAA	-24	NA	112764632	112736343	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_112739049_112740817_112741008_112742705_112742770_112746419_112746576_112752266_112752475_112755976_112757215_112760712_112760765_112762502_112762570_112764561
H1_mix_00051775	chr2	-	1174	3	NNC	ENSG00000240356.6	novel	738	3	NA	NA	0	279	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_2	4	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCACTTTTAGAGGATTT	NA	False	NA	NA	False	TATAAA	-31	NA	113627090	113611404	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_113612248_113625608_113625730_113626880
H1_mix_00051778	chr2	-	2284	7	FSM	ENSG00000115084.15	ENST00000409342.1	2284	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	30.8472941366914	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTGCCTTTCATACTC	-5	True	NA	NA	False	TATAAA	-16	NA	113756620	113741883	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_113742880_113743712_113743795_113746276_113746340_113750424_113750569_113755164_113755307_113755453_113755545_113755854
H1_mix_00051779	chr2	-	1711	7	FSM	ENSG00000115084.15	ENST00000498768.1	1711	7	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_6	9.4809751022186	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTATAAAATTTTTTTAA	0	True	NA	NA	False	AATGAA	-25	NA	113756587	113741908	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_113742880_113743712_113743795_113746276_113746340_113750424_113750569_113755164_113755307_113755453_113755545_113756369
H1_mix_00051780	chr2	-	735	3	FSM	ENSG00000235026.7	ENST00000432658.1	730	3	0	-5	0	5	multi-exon	FALSE	canonical	3	27	junction_2	5.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTACACAGCCCTTATG	-7	True	NA	0	True	AATAAA	-20	NA	115161343	115144042	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_115144369_115144858_115145028_115161103
H1_mix_00051781	chr2	-	6912	24	FSM	ENSG00000125633.11	ENST00000376300.7	6833	24	-76	-3	-13	0	multi-exon	FALSE	canonical	3	73	junction_3	14.2835185998298	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGACTCTTTCTTGGGTC	-8	True	NA	93	True	GATAAA	-19	NA	118014146	117915477	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_117920397_117931036_117931151_117935494_117935580_117936701_117936740_117939028_117939112_117941188_117941298_117944023_117944087_117945528_117945583_117946810_117946883_117948104_117948187_117949321_117949396_117952372_117952436_117958364_117958482_117973907_117973995_117974849_117974901_117975187_117975281_117977993_117978031_117985968_117986070_117995445_117995503_117996263_117996363_118000820_118000933_118006721_118006817_118008544_118008659_118013953
H1_mix_00051786	chr2	-	886	2	FSM	ENSG00000226856.8	ENST00000669120.2	1473	2	578	9	420	0	multi-exon	FALSE	canonical	3	15	junction_1	0	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCTGATTTCATTTAGA	9316	False	NA	-13	True	ATTAAA	-18	NA	118185836	118182935	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_118183323_118185337
H1_mix_00051790	chr2	-	5922	1	FSM	ENSG00000226479.4	ENST00000426077.3	5922	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCTTTAACTTCTAAGAT	-15	True	NA	-10	True	AATAAA	-16	NA	120223400	120217478	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_120217500_120223400
H1_mix_00051791	chr2	-	9287	15	FSM	ENSG00000115112.8	ENST00000263707.6	9287	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	3.3692789757345	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTGGCTCAGGCCTTG	-1	True	NA	74	True	AATAAA	-19	NA	121285202	121216586	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_121224388_121225561_121225614_121231825_121231969_121234090_121234195_121235220_121235312_121237622_121237717_121237801_121237851_121239557_121239650_121242358_121242470_121246817_121246971_121248163_121248271_121248981_121249088_121249570_121249648_121281119_121281272_121285047
H1_mix_00051794	chr2	-	7823	37	NIC	ENSG00000074054.20	novel	7877	39	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_12	110.320618602729	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTGCTTGATGATGTCT	12	True	NA	-4	True	AATAAA	-16	NA	121649438	121337775	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_121340948_121347037_121347155_121348511_121348719_121363171_121363301_121365093_121365285_121367587_121367832_121377498_121377650_121387121_121387229_121387762_121387907_121397139_121397284_121398321_121398401_121401508_121401673_121404370_121404435_121407470_121407716_121409023_121409048_121410865_121410970_121425138_121425307_121430072_121430178_121447336_121447508_121448275_121448326_121448952_121449121_121450912_121450991_121451789_121451850_121457686_121457758_121458839_121458976_121459979_121460126_121461100_121461194_121462531_121462606_121469807_121469961_121503166_121503235_121515664_121515763_121525844_121525921_121527798_121527891_121528676_121528781_121530246_121530326_121605700_121606181_121649371
H1_mix_00051801	chr2	-	1696	7	FSM	ENSG00000155438.12	ENST00000285814.9	1686	7	0	-10	0	10	multi-exon	FALSE	canonical	3	544	junction_3	70.0541457255267	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCTGTAATCCCAGCAC	-2	True	NA	11	True	ATTAAA	-26	NA	121736875	121726934	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_121727913_121728287_121728357_121728476_121728537_121730892_121731105_121732095_121732205_121735612_121735751_121736745
H1_mix_00051802	chr2	-	2127	15	NIC	ENSG00000136717.15	novel	2487	19	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	3	77	junction_8	51.4406731793321	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTATTTGTTCTCCCTCT	-1	True	NA	-5	True	GATAAA	-18	NA	127107154	127048022	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_127048634_127050420_127050523_127050801_127050913_127051153_127051244_127059010_127059156_127062114_127062198_127063570_127063647_127063932_127064019_127068162_127068256_127068923_127069032_127069994_127070091_127070552_127070648_127070761_127070817_127076625_127076707_127106859
H1_mix_00051804	chr2	-	2329	15	FSM	ENSG00000136717.15	ENST00000393040.7	2293	15	-34	-2	-34	2	multi-exon	FALSE	canonical	3	57	junction_4	54.651819993221	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTATTTGTTCTCCCT	NA	False	NA	-7	True	GATAAA	-16	NA	127107322	127048024	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127048634_127050420_127050523_127050801_127050913_127051153_127051244_127057472_127057602_127059010_127059156_127062114_127062198_127063570_127063647_127063932_127064019_127068923_127069032_127069994_127070091_127070552_127070648_127070761_127070817_127076625_127076707_127106859
H1_mix_00051805	chr2	-	2110	13	FSM	ENSG00000136717.15	ENST00000348750.8	2074	13	-34	-2	-34	2	multi-exon	FALSE	canonical	3	7	junction_3	62.2460953706246	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTATTTGTTCTCCCT	NA	False	NA	-7	True	GATAAA	-16	NA	127107322	127048024	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127048634_127050420_127050523_127050801_127050913_127059010_127059156_127062114_127062198_127063570_127063647_127063932_127064019_127068923_127069032_127069994_127070091_127070552_127070648_127070761_127070817_127076625_127076707_127106859
H1_mix_00051806	chr2	-	2430	16	NIC	ENSG00000136717.15	novel	2487	19	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_4	60.5810384709789	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGTATTTGTTCTCC	NA	False	NA	-9	True	GATAAA	-14	NA	127107332	127048026	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_127048634_127050420_127050523_127050801_127050913_127051153_127051244_127057472_127057602_127059010_127059156_127062114_127062198_127063570_127063647_127063932_127064019_127068162_127068256_127068923_127069032_127069994_127070091_127070552_127070648_127070761_127070817_127076625_127076707_127106859
H1_mix_00051808	chr2	-	2327	8	FSM	ENSG00000186684.14	ENST00000409327.2	2327	8	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_7	8.93970734123544	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAATAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	127220313	127186409	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127187388_127193093_127193298_127193788_127193868_127195334_127195502_127199375_127199540_127201121_127201332_127203371_127203572_127219988
H1_mix_00051811	chr2	-	2725	15	FSM	ENSG00000163161.14	ENST00000285398.7	2718	15	0	-7	0	7	multi-exon	FALSE	canonical	1	106	junction_12	61.7180885071758	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACAAGTGTTTTTATGCTT	8	True	NA	-2	True	AATAAA	-30	NA	127294144	127257282	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127257728_127259295_127259449_127261227_127261347_127271335_127271454_127272864_127272962_127279172_127279376_127280446_127280632_127286702_127287018_127288659_127288865_127289336_127289502_127289688_127289825_127290223_127290274_127292609_127292847_127293512_127293719_127294053
H1_mix_00051814	chr2	-	563	4	FSM	ENSG00000163161.14	ENST00000456257.1	563	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	110.031308675708	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTCCCTGCGGTAAGTG	5690	False	NA	NA	False	NA	NA	NA	127290275	127288672	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127288865_127289336_127289520_127289688_127289825_127290223
H1_mix_00051815	chr2	-	11360	17	FSM	ENSG00000169967.17	ENST00000682094.1	11360	17	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_15	8.83529852353615	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTTTTTCCAAATCTATT	-21	True	NA	0	True	AATAAA	-24	NA	127387975	127298667	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127307805_127308584_127308763_127314753_127314884_127317628_127317761_127318168_127318318_127322045_127322253_127323901_127323995_127324173_127324242_127325727_127325808_127326686_127326818_127329920_127330009_127330391_127330506_127335869_127335970_127337737_127337779_127338931_127339051_127343125_127343195_127387451
H1_mix_00051816	chr2	-	3005	15	NNC	ENSG00000163166.15	novel	2973	14	NA	NA	0	-20514	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	138.25538333247	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCGCATATCGGTGCTTT	-10	True	NA	NA	False	NA	NA	NA	127526489	127456720	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_127456755_127480813_127481176_127486552_127486665_127489178_127489236_127489831_127489944_127491970_127492089_127493280_127493411_127494871_127494955_127495997_127496149_127498139_127498238_127502814_127502873_127503386_127503577_127504683_127505753_127523675_127523792_127526174
H1_mix_00051817	chr2	-	2973	14	FSM	ENSG00000163166.15	ENST00000295321.9	2973	14	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_10	46.0244339531738	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGGCTGTCTCTTCA	-10	True	NA	-19	True	AATAAA	-15	NA	127526489	127480811	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127481176_127486552_127486665_127489178_127489236_127489831_127489944_127491970_127492089_127493280_127493411_127494871_127494955_127495997_127496149_127498139_127498238_127502814_127502873_127503386_127503577_127504683_127505753_127523675_127523792_127526174
H1_mix_00051818	chr2	-	2111	10	FSM	ENSG00000072163.20	ENST00000324938.9	2111	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	7.57350808353421	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGCAGCCTGCGTGGTT	936	False	NA	-5	True	AATGAA	-16	NA	127664546	127638425	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127639429_127640069_127640146_127640269_127640319_127640895_127640989_127642048_127642200_127642922_127643073_127654423_127654545_127654829_127654897_127657402_127657563_127664305
H1_mix_00051819	chr2	-	2316	10	FSM	ENSG00000072163.20	ENST00000355119.9	2387	10	71	0	71	0	multi-exon	FALSE	canonical	3	7	junction_9	6.03692342542494	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGCAGCCTGCGTGGTT	26	True	NA	-5	True	AATGAA	-16	NA	127675459	127638425	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127639429_127640069_127640146_127640269_127640319_127640895_127640989_127642048_127642200_127642922_127643073_127654423_127654545_127654829_127654897_127657402_127657563_127675013
H1_mix_00051820	chr2	-	9495	22	FSM	ENSG00000136709.12	ENST00000322313.9	9490	22	0	-5	0	5	multi-exon	FALSE	canonical	3	184	junction_9	62.1740297658457	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGTGTAACTCAGGTGG	0	True	NA	0	True	AATAAA	-24	NA	127811171	127701021	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127706553_127708676_127708893_127709489_127709583_127709692_127709857_127713582_127714022_127717154_127717264_127719264_127720354_127721835_127721989_127722590_127722731_127722957_127723045_127723252_127723348_127724332_127724444_127724886_127724966_127725060_127725216_127726650_127726778_127763061_127763160_127764827_127764980_127765173_127765270_127768188_127768294_127768932_127769002_127770777_127771005_127811011
H1_mix_00051822	chr2	-	5015	1	Genic_Genomic	ENSG00000136709.12	novel	NA	NA	NA	NA	70556	5	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGACTGTTCACCGAGCT	8486	False	NA	35	True	AATAAA	-19	NA	127740397	127735382	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr2_-_127735400_127740400
H1_mix_00051823	chr2	-	3120	6	FSM	ENSG00000136709.12	ENST00000409658.7	3104	6	0	-16	0	16	multi-exon	FALSE	canonical	3	316	junction_2	15.239422561239	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTATGAAATTACTTCATT	0	True	NA	-29	True	AATAAA	-2	NA	127811171	127762516	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127764980_127765173_127765270_127768188_127768294_127768932_127769002_127770777_127771005_127811011
H1_mix_00051826	chr2	-	1758	3	FSM	ENSG00000144231.11	ENST00000409955.1	1758	3	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	300.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTCTGGAGAAAAATAAAAT	18	True	NA	-40	True	AAGAAA	-5	NA	127858117	127846698	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127848186_127852924_127853106_127858027
H1_mix_00051827	chr2	-	1706	3	NIC	ENSG00000144231.11	novel	5038	4	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	3	125	junction_2	341	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTCTGGAGAAAAATAAAAT	-15	True	NA	-40	True	AAGAAA	-5	NA	127858150	127846698	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_127848186_127850589_127850686_127858027
H1_mix_00051831	chr2	-	5418	9	NIC	ENSG00000144233.11	novel	4860	9	NA	NA	-580	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_3	25.682861503345	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTTTTGTTCTGCTTTTTC	NA	False	NA	-15	True	AATAAA	-17	NA	127886547	127861629	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_127865206_127866899_127866997_127867144_127867280_127869453_127869545_127870813_127870929_127871248_127871360_127873827_127874273_127884202_127884313_127885809
H1_mix_00051832	chr2	-	4173	21	FSM	ENSG00000136715.19	ENST00000357702.9	4173	21	0	0	0	0	multi-exon	FALSE	canonical	2	50	junction_20	42.1041565644058	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTTTGCATCTTTTTGTA	-3	True	NA	-2	True	AATAAA	-27	NA	128027295	127941216	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127942165_127942423_127942538_127945455_127945560_127949868_127949995_127950159_127950409_127954985_127955345_127977984_127978090_127986784_127986963_127989563_127989867_127993186_127993309_127996349_127996492_127999740_127999846_128000055_128000147_128000306_128000455_128010268_128010394_128013029_128013155_128014802_128014915_128016388_128016548_128017679_128017916_128026180_128026299_128027091
H1_mix_00051833	chr2	-	4089	21	FSM	ENSG00000136715.19	ENST00000643581.2	4084	21	0	-5	0	0	multi-exon	FALSE	canonical	2	142	junction_15	27.5642431421579	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTTTGCATCTTTTTGTA	-4	True	NA	-2	True	AATAAA	-27	NA	128028059	127941216	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127942165_127942423_127942538_127945455_127945560_127949868_127949995_127950159_127950409_127954985_127955345_127977984_127978090_127986784_127986963_127989563_127989867_127993186_127993309_127996349_127996492_127999740_127999846_128000055_128000147_128000306_128000455_128010268_128010394_128013029_128013155_128014802_128014915_128016388_128016548_128017679_128017916_128026180_128026299_128027939
H1_mix_00051834	chr2	-	4162	20	NIC	ENSG00000136715.19	novel	4084	21	NA	NA	27	144	combination_of_known_junctions	FALSE	canonical	2	77	junction_6	37.0639187353707	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTCTAAATATGCTACAGT	2	True	NA	NA	False	NA	NA	NA	128028093	127941072	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_127942165_127942423_127942538_127945455_127945560_127949868_127949995_127950159_127950409_127954985_127955345_127986784_127986963_127989563_127989867_127993186_127993309_127996349_127996492_127999740_127999846_128000055_128000147_128000306_128000455_128010268_128010394_128013029_128013155_128014802_128014915_128016388_128016548_128017679_128017916_128026180_128026299_128027939
H1_mix_00051835	chr2	-	4123	21	FSM	ENSG00000136715.19	ENST00000259234.10	4140	21	24	-7	24	0	multi-exon	FALSE	canonical	2	14	junction_8	48.366181366736	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTTTGCATCTTTTTGTA	-1	True	NA	-2	True	AATAAA	-27	NA	128028096	127941216	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127942165_127942423_127942538_127945455_127945560_127949868_127949995_127950159_127950409_127954985_127955345_127977984_127978090_127986784_127986960_127989563_127989867_127993186_127993309_127996349_127996492_127999740_127999846_128000055_128000147_128000306_128000455_128010268_128010394_128013029_128013155_128014802_128014915_128016388_128016548_128017679_128017916_128026180_128026299_128027939
H1_mix_00051838	chr2	-	4224	2	FSM	ENSG00000136720.7	ENST00000259241.7	4223	2	0	-1	0	1	multi-exon	FALSE	canonical	3	315	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCGGGTGTGCTGTGGTCT	-1	True	NA	-4	True	AATAAA	-14	NA	128318868	128265478	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_128268871_128318036
H1_mix_00051841	chr2	-	405	3	FSM	ENSG00000214100.9	ENST00000433290.6	407	3	5	-3	-1	3	multi-exon	FALSE	canonical	2	4	junction_2	1.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCTGCTGACAGAGTAA	11	True	NA	NA	False	AATAAA	-23	NA	129934317	129922857	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_129923000_129923557_129923682_129934178
H1_mix_00051842	chr2	-	3385	4	FSM	ENSG00000152076.19	ENST00000496704.1	3385	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	11.5758369027902	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	2002	False	NA	NA	False	AATAAA	-17	NA	130143028	130139286	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_130139691_130139890_130139948_130140022_130140097_130140178
H1_mix_00051843	chr2	-	1625	9	NNC	ENSG00000152076.19	novel	1549	8	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	25.203856351757	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	NA	False	NA	NA	False	AATAAA	-17	NA	130145075	130139286	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_130139691_130139890_130139948_130140022_130140097_130140178_130140372_130141157_130141297_130142132_130142382_130143268_130143314_130144339_130144475_130144746
H1_mix_00051844	chr2	-	1329	8	FSM	ENSG00000152076.19	ENST00000409943.8	1329	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	13.0571741168741	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	NA	False	NA	NA	False	AATAAA	-17	NA	130145112	130139286	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_130139691_130139890_130139948_130140022_130140097_130140178_130140372_130141157_130141297_130142132_130142184_130143268_130143314_130144746
H1_mix_00051847	chr2	-	3677	19	FSM	ENSG00000136699.20	ENST00000351288.10	3661	19	0	-16	0	0	multi-exon	TRUE	canonical	3	595	junction_10	76.6949223293896	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGTCTCTAGGAGGTTC	-7	True	NA	NA	False	AATAAA	-34	NA	130181601	130151391	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_130152885_130153042_130153172_130153318_130153451_130153701_130153936_130154276_130154483_130155095_130155260_130156034_130156136_130156584_130156676_130157250_130157397_130164373_130164446_130167457_130167591_130172348_130172501_130172624_130172678_130172786_130172896_130173278_130173355_130173513_130173657_130174913_130175001_130176553_130176638_130181529
H1_mix_00051848	chr2	-	4897	20	FSM	ENSG00000136699.20	ENST00000409031.5	4896	20	0	-1	0	0	multi-exon	FALSE	canonical	3	38	junction_10	225.621787812556	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTCTGGCACCTGGGCTC	1143	False	NA	NA	False	AATAAA	-18	NA	130182750	130151407	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_130152885_130153042_130153172_130153318_130153451_130153701_130153936_130154276_130154483_130155095_130155260_130156034_130156136_130156584_130156676_130157250_130157397_130161185_130161273_130164373_130164446_130167457_130167591_130172348_130172501_130172624_130172678_130172786_130172896_130173278_130173355_130173513_130173657_130174913_130175001_130176553_130176638_130181529
H1_mix_00051849	chr2	-	3768	19	FSM	ENSG00000136699.20	ENST00000680679.1	3768	19	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_8	181.640747386458	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAATAAACATGTCCTTGC	-2	True	NA	NA	False	AATGAA	-20	NA	130181596	130151433	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_130152885_130153042_130153172_130153318_130153451_130153701_130153936_130154276_130154483_130155095_130155260_130156034_130156136_130156584_130156814_130157250_130157397_130164373_130164446_130167457_130167591_130172348_130172501_130172624_130172678_130172786_130172896_130173278_130173355_130173513_130173657_130174913_130175001_130176553_130176638_130181529
H1_mix_00051855	chr2	-	536	1	FSM	ENSG00000230756.1	ENST00000437982.1	621	1	170	-85	170	85	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATGAAGCAGTTCAAAACT	NA	False	NA	NA	False	AATGAA	-32	NA	130213320	130212784	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_130212800_130213300
H1_mix_00051856	chr2	-	1770	5	FSM	ENSG00000136710.10	ENST00000259229.7	1769	5	0	-1	0	1	multi-exon	FALSE	canonical	3	292	junction_1	16.4069345095298	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTTGAACTTTAACATAAT	-12	True	NA	NA	False	AATACA	-21	NA	130342164	130337931	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_130339233_130340907_130341040_130341666_130341750_130341840_130341945_130342014
H1_mix_00051857	chr2	-	3566	2	FSM	ENSG00000136710.10	ENST00000465315.1	3562	2	0	-4	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTGTGTTTTTTGATC	17	True	NA	-2	True	AGTAAA	-21	NA	130342135	130338242	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_130339233_130339559
H1_mix_00051859	chr2	-	2070	4	FSM	ENSG00000178162.8	ENST00000424873.5	2070	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	40.7130882586369	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGAGTGGTCGTTGT	NA	False	NA	NA	False	AATAAA	-14	NA	130427986	130416754	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_130418299_130419070_130419246_130425090_130425159_130427703
H1_mix_00051860	chr2	-	3414	3	NIC	ENSG00000178162.8	novel	2070	4	NA	NA	-382	0	intron_retention	FALSE	canonical	3	58	junction_2	49	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGAGTGGTCGTTGT	NA	False	NA	NA	False	AATAAA	-14	NA	130428558	130416754	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_130419246_130425090_130425159_130427703
H1_mix_00051861	chr2	-	3992	2	FSM	ENSG00000178162.8	ENST00000430785.1	3992	2	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACAATGAACTGACCTAGA	NA	False	NA	NA	False	NA	NA	NA	130427264	130417427	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_130419246_130425090
H1_mix_00051862	chr2	-	603	6	FSM	ENSG00000178162.8	ENST00000433703.5	603	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_4	28.1595454508769	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGAAGTAGTCTCAAAGG	NA	False	NA	NA	False	AATAGA	-14	NA	130427775	130418233	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_130418299_130419070_130419246_130425090_130425159_130425913_130426039_130426165_130426264_130427703
H1_mix_00051865	chr2	-	1600	2	FSM	ENSG00000233221.7	ENST00000660150.1	1518	2	-89	7	-89	-7	multi-exon	FALSE	canonical	2	4	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTATGTCTGTCTTTTC	NA	False	NA	NA	False	AATAAA	-8	NA	130836823	130834939	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_130836026_130836309
H1_mix_00051866	chr2	-	5285	7	FSM	ENSG00000152102.18	ENST00000409185.5	5285	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	145.06741727747	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGGTTTTCATGATTT	7	True	NA	-1	True	AATAAA	-18	NA	131093428	131047875	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_131052453_131052890_131053016_131055271_131055450_131055552_131055696_131071854_131071939_131082576_131082658_131093331
H1_mix_00051869	chr2	-	1350	1	FSM	ENSG00000217950.4	ENST00000407594.2	1944	1	574	20	574	-20	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCTCTCAGAGGAGGAC	NA	False	NA	NA	False	NA	NA	NA	131444013	131442663	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_131442700_131444000
H1_mix_00051870	chr2	-	599	3	FSM	ENSG00000173272.16	ENST00000309451.7	599	3	0	0	0	0	multi-exon	FALSE	canonical	3	1480	junction_1	16	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTCTCTACTGTTTTTT	-3	True	NA	-19	True	AATAAA	-30	NA	131492397	131483959	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_131484219_131491875_131492025_131492206
H1_mix_00051871	chr2	-	2826	2	FSM	ENSG00000173272.16	ENST00000491265.1	2826	2	0	0	0	0	multi-exon	FALSE	canonical	3	1512	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCCAGGTGGGCGTGGTG	18	False	NA	NA	False	NA	NA	NA	131492376	131489368	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_131492025_131492206
H1_mix_00051872	chr2	-	321	1	FSM	ENSG00000226886.1	ENST00000450396.1	207	1	-115	1	-115	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGGGTTCGGGGACCCG	NA	False	NA	NA	False	NA	NA	NA	132038108	132037787	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_132037800_132038100
H1_mix_00051875	chr2	-	3434	3	FSM	ENSG00000224043.8	ENST00000413962.5	636	3	38	-2836	30	118	multi-exon	FALSE	canonical	3	12	junction_2	3	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTCAGGTTCATTAAAAT	-18	True	NA	NA	False	NA	NA	NA	134918640	134864481	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_134867740_134868943_134869042_134918562
H1_mix_00051877	chr2	-	4476	21	NIC	ENSG00000121988.18	novel	6943	22	NA	NA	0	471	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	14.6205335059977	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAGTGATGATGACAAA	-5	True	NA	NA	False	ATTAAA	-25	NA	135530576	135199191	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_135200441_135202831_135202964_135207433_135207837_135208867_135208979_135217464_135217608_135219076_135219179_135224425_135224518_135227811_135228016_135230512_135230928_135265533_135265687_135268961_135269142_135271767_135271888_135275635_135275756_135313488_135313606_135315358_135315531_135345549_135345636_135349983_135350216_135353449_135353629_135390801_135390821_135504328_135504497_135530497
H1_mix_00051878	chr2	-	833	4	FSM	ENSG00000121988.18	ENST00000472452.1	823	4	0	-10	0	10	multi-exon	FALSE	canonical	3	25	junction_1	17.326921891156	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAAGTTTTCCTTTGTTTT	NA	False	NA	-8	True	AATAAA	-19	NA	135353628	135345125	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_135345462_135345549_135345636_135349983_135350216_135353449
H1_mix_00051879	chr2	-	3767	17	FSM	ENSG00000076003.5	ENST00000264156.3	3753	17	0	-14	0	14	multi-exon	FALSE	canonical	3	923	junction_13	109.26859109552	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGATTTGTCATGGGATTT	19	False	135876462	2	True	AATAAA	-34	NA	135876443	135839611	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_135840952_135844544_135844685_135846236_135846393_135848052_135848189_135851401_135851564_135852786_135852916_135856727_135856884_135857896_135858005_135859300_135859443_135862606_135862749_135865012_135865164_135866131_135866278_135866562_135866729_135868610_135868861_135870250_135870362_135872696_135872844_135876258
H1_mix_00051882	chr2	-	1668	2	FSM	ENSG00000121966.7	ENST00000241393.4	1668	2	0	0	0	0	multi-exon	FALSE	canonical	3	385	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTGTTATGTTCTGATT	-1	True	NA	-3	True	AATAAA	-18	NA	136118149	136114348	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_136115913_136118045
H1_mix_00051883	chr2	-	1522	1	FSM	ENSG00000227347.1	ENST00000447355.1	1390	1	-1	-131	-1	131	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAATGTTTTAGATCCTT	NA	False	NA	NA	False	NA	NA	NA	136200504	136198982	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_136199000_136200500
H1_mix_00051884	chr2	-	203	1	FSM	ENSG00000230037.1	ENST00000392399.3	473	1	296	-26	296	26	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGATGGCATTACTCTGC	NA	False	NA	NA	False	NA	NA	NA	136329617	136329414	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_136329400_136329600
H1_mix_00051886	chr2	-	2709	2	FSM	ENSG00000144227.5	ENST00000272641.4	2709	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGGTGGTTATTTTTTA	6	True	NA	2	True	AATAAA	-28	NA	138780390	138669156	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_138671666_138780190
H1_mix_00051888	chr2	-	2954	12	FSM	ENSG00000121964.15	ENST00000409214.5	2954	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_11	34.019683169824	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTAGCTTTTGAAATGAGT	NA	False	NA	NA	False	GATAAA	-37	NA	144294493	143945753	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_143947136_143951981_143952074_143952772_143952844_143957194_143957340_143970652_143970763_144007181_144007536_144141881_144142056_144145571_144145740_144208602_144208805_144211514_144211580_144235675_144235738_144294364
H1_mix_00051889	chr2	-	2559	8	NIC	ENSG00000121964.15	novel	753	6	NA	NA	46	-7	combination_of_known_junctions	FALSE	canonical	2	9	junction_6	41.7421628963486	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAATAATTCCCTGTCTTC	105	False	NA	NA	False	AATAAA	-16	NA	144332466	144005757	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_144007536_144141881_144142056_144145571_144145740_144208602_144208805_144211514_144211580_144230240_144230323_144235675_144235738_144332438
H1_mix_00051892	chr2	-	6711	15	FSM	ENSG00000115947.14	ENST00000535373.5	6710	15	0	-1	0	0	multi-exon	FALSE	canonical	3	24	junction_14	152.151324378738	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGATGAAGCTTCTTTC	820	False	148020761	1	True	TATAAA	-18	NA	148020747	147930395	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_147935699_147938145_147938214_147938297_147938394_147939139_147939249_147943435_147943523_147948050_147948225_147952372_147952525_147955346_147955396_147958297_147958384_147958790_147958867_147972738_147972830_147973447_147973525_147975901_147975976_147981927_147982082_148020632
H1_mix_00051893	chr2	-	6329	11	FSM	ENSG00000115947.14	ENST00000536575.5	6328	11	0	-1	0	0	multi-exon	FALSE	canonical	1	5	junction_10	136.431667878099	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGATGAAGCTTCTTTC	0	True	NA	1	True	TATAAA	-18	NA	148020761	147930395	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_147935699_147938145_147938214_147938297_147938394_147939139_147939249_147943435_147943523_147948050_147948225_147952372_147952525_147955346_147955396_147958297_147958384_147958790_147958867_148020632
H1_mix_00051894	chr2	-	2615	14	NIC	ENSG00000115947.14	novel	6547	14	NA	NA	17	1990	combination_of_known_junctions	FALSE	canonical	3	77	junction_13	106.785467619309	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATGAGCACTTAGTGAC	12	True	NA	-18	True	AATGAA	-2	NA	148020707	147934322	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_147935699_147938145_147938214_147938297_147938394_147939139_147939249_147943435_147943523_147948050_147948225_147952372_147952525_147955346_147955396_147958297_147958384_147958790_147958867_147972738_147972830_147973447_147973525_147975901_147975976_148020607
H1_mix_00051902	chr2	-	1726	7	FSM	ENSG00000168288.13	ENST00000428879.5	1726	7	0	0	0	0	multi-exon	FALSE	canonical	3	1023	junction_1	40.4093636013569	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACAATAATGTGTGTTTT	189	False	NA	-43	True	AATAAA	-12	NA	149587602	149569643	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_149570169_149571084_149571172_149575710_149575842_149576436_149576543_149579430_149579649_149582126_149582272_149587088
H1_mix_00051903	chr2	-	2779	5	FSM	ENSG00000115963.14	ENST00000375734.6	2777	5	0	-2	0	2	multi-exon	FALSE	canonical	3	126	junction_2	10.7558123821495	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTGTCTTTTATTATCT	-2	True	NA	-2	True	AATAAA	-27	NA	150487667	150468192	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_150470239_150471626_150471762_150474874_150474985_150486693_150486782_150487267
H1_mix_00051904	chr2	-	2743	6	FSM	ENSG00000115963.14	ENST00000263895.9	2684	6	-59	0	3	0	multi-exon	FALSE	canonical	3	50	junction_5	36.201657420621	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATCTGTCTTTTATTAT	8	False	NA	-4	True	AATAAA	-25	NA	150487726	150468194	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_150470239_150471626_150471762_150474874_150474985_150486693_150486782_150487267_150487456_150487548
H1_mix_00051905	chr2	-	4937	4	FSM	ENSG00000184898.7	ENST00000331426.6	4176	4	-54	-707	-54	707	multi-exon	FALSE	canonical	0	0	junction_2	1.24721912892465	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACATTTGTTCTTGGCTT	NA	False	NA	NA	False	ATTAAA	-43	NA	151261917	151247232	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_151251665_151252754_151252856_151255532_151255744_151261724
H1_mix_00051907	chr2	-	426	4	FSM	ENSG00000183091.21	ENST00000483418.1	643	4	217	0	217	0	multi-exon	FALSE	canonical	2	3	junction_1	1.24721912892465	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAGTCAAAAAAACCACAC	7215	False	NA	NA	False	NA	NA	NA	151519768	151516458	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_151516564_151518317_151518423_151518964_151519070_151519657
H1_mix_00051908	chr2	-	276	2	FSM	ENSG00000162980.17	ENST00000487818.1	577	2	301	0	5	0	multi-exon	FALSE	canonical	3	3	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGTGTTTTTGCAGTGAT	NA	False	NA	NA	False	NA	NA	NA	151791785	151789634	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_151789883_151791757
H1_mix_00051909	chr2	-	5264	6	FSM	ENSG00000162980.17	ENST00000295087.13	5264	6	0	0	0	0	multi-exon	FALSE	canonical	3	503	junction_5	38.2549343222544	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTATGGCTTGTCTTAACT	9	True	NA	0	True	AATAAA	-22	NA	151828421	151798796	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_151803325_151806820_151806973_151812356_151812441_151814168_151814317_151815138_151815200_151828130
H1_mix_00051910	chr2	-	696	2	FSM	ENSG00000162980.17	ENST00000487723.1	696	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATTAGACACAGTTTTTG	20	True	NA	NA	False	NA	NA	NA	151828465	151827479	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_151827841_151828130
H1_mix_00051911	chr2	-	5472	14	FSM	ENSG00000115145.10	ENST00000263904.5	5472	14	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_7	5.94053371578702	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTATCTGTAATTT	-15	True	NA	-1	True	AATAAA	-17	NA	152175763	152116800	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_152120803_152123765_152123936_152126225_152126380_152132113_152132169_152133172_152133261_152133401_152133485_152135508_152135604_152143826_152144014_152144887_152144958_152147161_152147309_152148023_152148123_152148224_152148301_152150144_152150230_152175602
H1_mix_00051912	chr2	-	8048	26	FSM	ENSG00000196504.19	ENST00000410080.8	8048	26	0	0	0	0	multi-exon	TRUE	canonical	3	924	junction_9	91.5549583583543	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTTAAAAAAAAAAAAAAAAC	21	True	NA	NA	False	GATAAA	-5	NA	152717981	152651592	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_152656399_152657888_152658021_152658947_152659010_152659092_152659190_152659269_152659357_152662602_152662699_152663034_152663173_152663654_152663772_152663875_152663968_152664137_152664253_152669136_152669271_152670230_152670382_152671272_152671382_152672458_152672624_152672977_152673043_152673597_152673707_152676404_152676780_152677450_152677476_152679055_152679110_152679351_152679473_152681225_152681337_152690961_152690979_152693037_152693069_152694541_152694623_152715994_152716127_152717355
H1_mix_00051913	chr2	-	7988	27	NIC	ENSG00000196504.19	novel	8048	26	NA	NA	-255	-126	combination_of_known_junctions	FALSE	canonical	3	66	junction_26	213.563596531135	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTGGATTTGTGTCAGT	NA	False	NA	NA	False	AATAAA	-33	NA	152718252	152651718	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_152656399_152657888_152658021_152658947_152659010_152659092_152659190_152659269_152659357_152662602_152662699_152663034_152663173_152663654_152663772_152663875_152663968_152664137_152664253_152669136_152669271_152670230_152670382_152671272_152671382_152672458_152672624_152672977_152673043_152673597_152673707_152676404_152676780_152677450_152677476_152679055_152679110_152679351_152679473_152681225_152681337_152690961_152690979_152693037_152693069_152694541_152694623_152715994_152716127_152717355_152717626_152717830
H1_mix_00051914	chr2	-	7994	27	NNC	ENSG00000196504.19	novel	8048	26	NA	NA	-423	-126	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_26	220.566916814148	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTGGATTTGTGTCAGT	NA	False	NA	NA	False	AATAAA	-33	NA	152718420	152651718	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_152656399_152657888_152658021_152658947_152659010_152659092_152659190_152659269_152659357_152662602_152662699_152663034_152663173_152663654_152663772_152663875_152663968_152664137_152664253_152669136_152669271_152670230_152670382_152671272_152671382_152672458_152672624_152672977_152673043_152673597_152673707_152676404_152676780_152677450_152677476_152679055_152679110_152679351_152679473_152681225_152681337_152690961_152690979_152693037_152693069_152694541_152694623_152715994_152716127_152717355_152717626_152717992
H1_mix_00051924	chr2	-	925	5	Intergenic	novelGene_731	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	97	junction_4	33.9005899653679	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACATATCTTTTGAGAGCA	NA	False	NA	5	True	AATAAA	-23	NA	156725526	156718786	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_-_156719061_156719246_156719341_156719556_156719669_156723247_156723446_156725279
H1_mix_00051925	chr2	-	902	5	Intergenic	novelGene_732	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	97	junction_4	35.0214220156749	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGACTACATATCTTTTGA	NA	False	NA	0	True	AATAAA	-18	NA	156725526	156718791	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_-_156719043_156719246_156719341_156719556_156719669_156723247_156723446_156725279
H1_mix_00051929	chr2	-	2577	5	FSM	ENSG00000115170.16	ENST00000684104.1	2823	5	246	0	246	0	multi-exon	FALSE	canonical	3	67	junction_3	9.12071817347735	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGAAATTGTTTTTCAAA	NA	False	NA	-5	True	AATAAA	-17	NA	157771119	157736445	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_157737666_157738439_157738571_157760879_157761078_157765920_157766197_157770367
H1_mix_00051930	chr2	-	2938	11	FSM	ENSG00000115170.16	ENST00000684348.1	2921	11	0	-17	0	0	multi-exon	FALSE	canonical	0	0	junction_10	22.4501670372405	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAATTGTTTTTCAAAAT	-21	True	NA	-3	True	AATAAA	-19	NA	157875880	157736443	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_157737666_157738439_157738571_157760879_157761078_157765920_157766197_157770367_157770515_157774087_157774188_157778130_157778343_157780336_157780601_157799426_157799501_157818384_157818560_157875741
H1_mix_00051931	chr2	-	3334	11	FSM	ENSG00000115170.16	ENST00000434821.7	3332	11	0	-2	0	0	multi-exon	FALSE	canonical	3	40	junction_10	12.4261820363296	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAATTGTTTTTCAAAAT	-4	True	NA	-3	True	AATAAA	-19	NA	157876330	157736443	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_157737666_157738439_157738571_157760879_157761078_157765920_157766197_157770367_157770515_157774087_157774188_157778130_157778343_157780336_157780601_157799426_157799501_157818384_157818560_157875795
H1_mix_00051935	chr2	-	8058	36	FSM	ENSG00000123636.19	ENST00000392782.5	8058	36	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_32	17.7105065093104	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTAGTTTTTCTTAATG	39	False	NA	-2	True	AATAAA	-18	NA	159616569	159318978	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_159320419_159324810_159324955_159325652_159325919_159332539_159332687_159336941_159337078_159337566_159337773_159347485_159347647_159348677_159348834_159349006_159349281_159349707_159350358_159373044_159373190_159374690_159374754_159382558_159382803_159383605_159383681_159385154_159385370_159386352_159386608_159389344_159389486_159395768_159395835_159397344_159397390_159398828_159398895_159400598_159400665_159404848_159404911_159405021_159405115_159412334_159412546_159428310_159428420_159429199_159429261_159430862_159431157_159432756_159433364_159438302_159438696_159439008_159439213_159446781_159446976_159448241_159448404_159453612_159453802_159478574_159478722_159555822_159555866_159616241
H1_mix_00051938	chr2	-	362	3	FSM	ENSG00000226266.7	ENST00000418770.5	375	3	13	0	13	0	multi-exon	FALSE	canonical	3	5	junction_2	7	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGGTAAATATCTGGATAA	1104	False	NA	NA	False	AATGAA	-11	NA	159712005	159670711	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_159670811_159710716_159710895_159711920
H1_mix_00051940	chr2	-	3932	6	FSM	ENSG00000241399.7	ENST00000259053.6	3932	6	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	1.72046505340853	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGATGTCTTCTTTGAGC	6	True	NA	NA	False	AATAAA	-16	NA	159798208	159768627	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_159772054_159777937_159777965_159780004_159780179_159780881_159780999_159783358_159783470_159798131
H1_mix_00051941	chr2	-	1966	1	Genic_Genomic	ENSG00000054219.11	novel	NA	NA	NA	NA	99330	1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGAGTTGATCCTTCTT	NA	False	NA	NA	False	AATAAA	-31	NA	159805319	159803353	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr2_-_159803400_159805300
H1_mix_00051942	chr2	-	4437	15	NNC	ENSG00000153250.21	novel	4016	16	NA	NA	-199	0	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_14	124.863026994399	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCCTGTCAATTTTTTT	NA	False	NA	-11	True	AATAAA	-18	NA	160408088	160272150	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_160274765_160275629_160275715_160277302_160277384_160278547_160278659_160281313_160281365_160282256_160282305_160284774_160284869_160284994_160285045_160286968_160287085_160300650_160300731_160303329_160303488_160313155_160313248_160318168_160318228_160367215_160367389_160407463
H1_mix_00051943	chr2	-	4232	15	NIC	ENSG00000153250.21	novel	4016	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	130	junction_14	116.357493641495	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCCTGTCAATTTTTTT	6	True	NA	-11	True	AATAAA	-18	NA	160407889	160272150	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_160274765_160275629_160275715_160277302_160277384_160278547_160278659_160281313_160281365_160282256_160282305_160284774_160284869_160284994_160285045_160286977_160287085_160300650_160300731_160303329_160303488_160313155_160313248_160318168_160318228_160367215_160367392_160407463
H1_mix_00051946	chr2	-	4501	14	FSM	ENSG00000153250.21	ENST00000348849.8	4286	14	-215	0	-215	0	multi-exon	FALSE	canonical	3	141	junction_13	94.3653983320521	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCCTGTCAATTTTTTT	NA	False	NA	-11	True	AATAAA	-18	NA	160494022	160272150	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_160274765_160275629_160275715_160277302_160277384_160278547_160278659_160281313_160281365_160284774_160284869_160284994_160285045_160286968_160287085_160300650_160300731_160303329_160303488_160313155_160313248_160318168_160318228_160367215_160367392_160493288
H1_mix_00051948	chr2	-	4337	14	NIC	ENSG00000153250.21	novel	4286	14	NA	NA	-144	0	combination_of_known_junctions	FALSE	canonical	3	130	junction_13	96.4090766430817	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCCTGTCAATTTTTTT	NA	False	NA	-11	True	AATAAA	-18	NA	160408033	160272150	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_160274765_160275629_160275715_160277302_160277384_160278547_160278659_160281313_160281365_160284774_160284869_160284994_160285045_160286968_160287085_160300650_160300731_160303329_160303488_160313155_160313248_160318168_160318228_160367215_160367392_160407463
H1_mix_00051950	chr2	-	4177	14	FSM	ENSG00000153250.21	ENST00000409972.5	1815	14	7	-2369	7	0	multi-exon	FALSE	canonical	3	130	junction_13	98.5064200593008	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCCTGTCAATTTTTTT	13	True	NA	-11	True	AATAAA	-18	NA	160407882	160272150	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_160274765_160275629_160275715_160277302_160277384_160278547_160278659_160281313_160281365_160284774_160284869_160284994_160285045_160286977_160287085_160300650_160300731_160303329_160303488_160313155_160313248_160318168_160318228_160367215_160367392_160407463
H1_mix_00051951	chr2	-	628	1	FSM	ENSG00000232320.6	ENST00000482477.2	511	1	-31	-86	-31	86	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGGCAGGCGCCCAGG	1	True	NA	NA	False	GATAAA	-19	NA	161341357	161340729	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_161340700_161341400
H1_mix_00051952	chr2	-	6844	1	FSM	ENSG00000226121.2	ENST00000420969.1	6821	1	25	-48	25	48	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGTGGATTATTAAATATC	NA	False	NA	NA	False	NA	NA	NA	161507680	161500836	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_161500800_161507700
H1_mix_00051953	chr2	-	3862	26	FSM	ENSG00000197635.11	ENST00000360534.8	3573	26	-292	3	-113	-3	multi-exon	TRUE	canonical	2	12	junction_6	5.02219075703024	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTAATGACTTGTGTCTT	205	False	NA	NA	False	AATAAA	-19	NA	162074507	161992247	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_161993385_161994960_161995035_161995299_161995373_162005744_162005810_162008561_162008662_162009240_162009296_162011792_162011988_162014395_162014466_162016767_162016867_162017107_162017156_162018728_162018851_162019222_162019277_162020228_162020297_162020580_162020689_162022754_162022800_162024803_162024940_162033540_162033654_162035163_162035325_162038301_162038423_162038948_162039022_162039131_162039185_162045531_162045613_162046914_162047007_162047402_162047502_162073398_162073487_162073975
H1_mix_00051955	chr2	-	9537	3	FSM	ENSG00000182263.14	ENST00000333129.4	9537	3	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	16	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAGTTTGATTTTTATCA	17	True	NA	NA	False	AATAAA	-23	NA	163736008	163602610	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_163611807_163734902_163735073_163735837
H1_mix_00051957	chr2	-	6940	5	ISM	ENSG00000115290.10	ENST00000263915.8	2415	14	118046	144	-6384	-144	intron_retention	FALSE	canonical	3	118	junction_2	10.6536378763313	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTGAATTATATATTTT	4	False	NA	NA	False	ATTAAA	-37	NA	164503436	164492560	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_164493183_164494430_164494525_164497007_164497096_164497210_164497284_164497373
H1_mix_00051958	chr2	-	2354	14	FSM	ENSG00000115290.10	ENST00000263915.8	2415	14	18	43	14	-43	multi-exon	FALSE	canonical	3	62	junction_8	29.8663690461362	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGTAATTTAAAAATATTAT	19	True	NA	NA	False	TTTAAA	-28	NA	164621464	164492459	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_164493183_164494430_164494525_164497007_164497096_164497210_164497284_164497373_164497491_164502254_164502336_164508454_164508551_164508741_164508853_164521979_164522118_164525003_164525079_164527013_164527136_164547659_164547817_164619686_164619820_164621118
H1_mix_00051959	chr2	-	1925	6	ISM	ENSG00000115290.10	ENST00000488342.5	1983	14	117956	0	-6384	0	3prime_fragment	FALSE	canonical	3	113	junction_5	12.1885191881541	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTGTTCTTGTGTGAT	4	False	NA	-8	True	ATTAAA	-19	NA	164503436	164492811	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_164493183_164494430_164494525_164497007_164497096_164497210_164497284_164497373_164497491_164502254
H1_mix_00051960	chr2	-	1983	14	FSM	ENSG00000115290.10	ENST00000488342.5	1983	14	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	36.1489358367598	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTGTTCTTGTGTGAT	1046	False	NA	-8	True	ATTAAA	-19	NA	164621392	164492811	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_164493183_164494430_164494525_164497007_164497096_164497210_164497284_164497373_164497491_164502254_164502336_164508454_164508604_164508741_164508853_164521979_164522118_164525003_164525079_164527013_164527136_164547659_164547817_164619686_164619820_164621118
H1_mix_00051963	chr2	-	3457	11	FSM	ENSG00000115339.14	ENST00000392701.8	3436	11	0	-21	0	21	multi-exon	FALSE	canonical	3	123	junction_6	16.0860187740783	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACGCTTGCTTAGGAGA	1	True	NA	NA	False	GATAAA	-39	NA	165794247	165747566	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_165748904_165749741_165749895_165754626_165754729_165754931_165755064_165757046_165757248_165758746_165758865_165759335_165759571_165761904_165762055_165764883_165765057_165770185_165770809_165794014
H1_mix_00051964	chr2	-	1237	2	FSM	ENSG00000123607.16	ENST00000680249.1	3857	2	2628	-8	2628	0	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTTCATTAAATTGTTCT	NA	False	NA	NA	False	AATATA	-13	NA	165859324	165857487	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_165857615_165858214
H1_mix_00051967	chr2	-	5415	29	FSM	ENSG00000123607.16	ENST00000243344.8	5415	29	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_21	17.1994230444287	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTGCTTTTTATTAAAT	20	True	NA	-3	True	AATAAA	-17	NA	165953776	165873361	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_165874833_165876164_165876233_165880678_165880800_165883793_165884019_165888278_165888475_165890478_165890641_165890837_165890989_165898685_165898768_165899769_165899881_165901721_165901911_165907677_165907785_165911326_165911466_165912513_165912625_165913573_165913647_165915200_165915440_165917256_165917482_165919275_165919434_165924548_165924679_165929134_165929336_165929649_165929748_165930171_165930365_165931757_165931857_165932972_165933058_165941026_165941185_165943218_165943342_165945523_165945691_165949393_165949505_165949594_165949725_165953684
H1_mix_00051970	chr2	-	3272	18	FSM	ENSG00000198648.11	ENST00000355999.5	3272	18	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_6	30.9638700048095	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTTTTGCATTGTTTCT	-5	True	NA	-2	True	AATAAA	-18	NA	168247595	167954021	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_167955571_167964661_167964727_168012633_168012703_168017042_168017096_168063499_168063571_168065318_168065382_168074981_168075012_168075108_168075232_168129540_168129607_168129709_168129759_168138087_168138222_168140288_168140391_168140648_168140759_168161786_168161843_168163738_168163881_168167298_168167408_168181977_168182091_168247227
H1_mix_00051971	chr2	-	3485	17	NIC	ENSG00000198648.11	novel	3272	18	NA	NA	-276	0	combination_of_known_splicesites	FALSE	canonical	3	84	junction_5	46.1610208265589	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTTTTGCATTGTTTCT	11	True	NA	-2	True	AATAAA	-18	NA	168247871	167954021	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_167955571_167964661_167964727_168012633_168012703_168017042_168017096_168063499_168063571_168074981_168075012_168075108_168075232_168129540_168129607_168129709_168129759_168138087_168138222_168140288_168140391_168140648_168140759_168161786_168161843_168163738_168163881_168167298_168167408_168181977_168182091_168247227
H1_mix_00051972	chr2	-	1349	7	FSM	ENSG00000152253.9	ENST00000282074.7	1342	7	0	-7	0	7	multi-exon	FALSE	canonical	3	584	junction_1	23.7954243967663	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATTTATAATCCCTTGGG	-16	True	NA	6	True	AATAAA	-30	NA	168890430	168870883	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_168871556_168873584_168873684_168876071_168876177_168877237_168877385_168889225_168889292_168889386_168889534_168890317
H1_mix_00051973	chr2	-	4200	15	FSM	ENSG00000138399.18	ENST00000453153.7	4200	15	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_12	78.4370604305107	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTGTGATATAATCCC	3	True	NA	0	True	AATAAA	-16	NA	169573865	169528507	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_169529927_169530586_169530702_169531351_169531491_169537226_169537341_169538012_169538142_169540050_169540180_169544720_169544836_169546217_169546705_169555123_169555256_169557186_169557298_169560386_169560786_169563224_169563351_169569183_169569253_169571652_169572172_169573668
H1_mix_00051974	chr2	-	2831	14	NIC	ENSG00000138399.18	novel	4200	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	28	junction_12	76.0358837740561	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATAGGTACAAATGTC	-3	True	NA	-30	True	AATAAA	-17	NA	169573812	169529754	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_169529927_169530586_169530702_169531351_169531491_169537226_169537341_169538012_169538142_169540050_169540180_169544720_169544836_169546217_169546705_169555123_169555256_169557186_169557298_169560386_169560786_169563224_169563351_169571652_169572172_169573668
H1_mix_00051975	chr2	-	2823	14	FSM	ENSG00000138399.18	ENST00000453929.6	2791	14	-32	0	1	0	multi-exon	FALSE	canonical	0	0	junction_11	91.0421581258541	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATAGGTACAAATGTC	4	True	NA	-30	True	AATAAA	-17	NA	169573864	169529754	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_169529927_169530586_169530702_169531351_169531491_169537226_169537341_169540050_169540180_169544720_169544836_169546217_169546705_169555123_169555256_169557186_169557298_169560386_169560786_169563224_169563351_169569183_169569253_169571652_169572172_169573668
H1_mix_00051979	chr2	-	2117	9	FSM	ENSG00000154479.13	ENST00000447353.6	2153	9	0	36	0	-36	multi-exon	FALSE	canonical	2	2	junction_1	3.07967124868873	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTGGGTATTTTGAATAA	-9	True	NA	NA	False	NA	NA	NA	169694405	169645460	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_169646183_169649181_169649347_169650328_169650522_169654074_169654215_169662279_169662437_169674575_169674770_169674866_169675041_169681006_169681234_169694260
H1_mix_00051980	chr2	-	2649	2	NNC	ENSG00000154479.13	novel	2153	9	NA	NA	0	-11453	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	0	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAATTGATCTACACATT	-2	True	NA	NA	False	NA	NA	NA	169694350	169686389	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_169688949_169694260
H1_mix_00051982	chr2	-	472	6	FSM	ENSG00000138382.15	ENST00000537825.5	464	6	0	-8	0	0	multi-exon	FALSE	canonical	1	12	junction_4	444.399189918254	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGGTCTCCAGCACCAT	340	False	NA	-18	True	AATAAA	-17	NA	169824558	169811756	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_169811859_169812456_169812507_169815476_169815529_169819560_169819644_169821942_169822058_169824488
H1_mix_00051983	chr2	-	1001	7	FSM	ENSG00000138382.15	ENST00000260953.10	1001	7	0	0	0	0	multi-exon	FALSE	canonical	3	837	junction_1	201.490005266321	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGGTCTCCAGCACCAT	-7	True	NA	-18	True	AATAAA	-17	NA	169824905	169811756	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_169811859_169812456_169812507_169815476_169815529_169819560_169819644_169821091_169821274_169821942_169822058_169824488
H1_mix_00051984	chr2	-	880	8	FSM	ENSG00000138382.15	ENST00000409965.5	880	8	0	0	0	0	multi-exon	FALSE	canonical	3	727	junction_7	241.951504670347	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGGTCTCCAGCACCAT	-27	True	NA	-18	True	AATAAA	-17	NA	169824925	169811756	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_169811859_169812456_169812507_169815476_169815529_169819560_169819644_169821091_169821274_169821942_169822058_169824488_169824641_169824781
H1_mix_00051985	chr2	-	800	8	FSM	ENSG00000138382.15	ENST00000392640.6	800	8	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_7	340.293750654775	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGGTCTCCAGCACCAT	-33	False	NA	-18	True	AATAAA	-17	NA	169824931	169811756	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_169811859_169812456_169812507_169815476_169815529_169819560_169819644_169821091_169821274_169821942_169822058_169824488_169824641_169824867
H1_mix_00051986	chr2	-	2240	1	FSM	ENSG00000222033.1	ENST00000409786.1	2117	1	-32	-91	-32	91	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGCGCCCGGGAAGAGCGT	NA	False	NA	76	True	NA	NA	NA	170714599	170712359	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_170712400_170714600
H1_mix_00051987	chr2	-	6923	22	NIC	ENSG00000198586.14	novel	4321	23	NA	NA	-693	431	combination_of_known_junctions	TRUE	canonical	3	17	junction_19	28.7087177733607	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGAGGCAGGATAGTCA	NA	False	NA	NA	False	NA	NA	NA	171161593	170990391	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_170993957_170996652_170996761_170997711_170997824_171006146_171006283_171006473_171006644_171006799_171006890_171006971_171007064_171011372_171011455_171014850_171014949_171028338_171028406_171046173_171046363_171049813_171049951_171050063_171050175_171053760_171053854_171055082_171055173_171056470_171056567_171058150_171058198_171061080_171061157_171081639_171081709_171082780_171082853_171117738_171117858_171160289
H1_mix_00051989	chr2	-	4321	23	FSM	ENSG00000198586.14	ENST00000359766.7	4321	23	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_10	38.8860647669297	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACATTGGAAGGGAGCTTT	649	False	NA	8	True	AATAAA	-33	NA	171160495	170992153	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_170993957_170996652_170996761_170997711_170997824_171006146_171006283_171006473_171006644_171006799_171006890_171006971_171007064_171011372_171011455_171014850_171014949_171022871_171023130_171028338_171028406_171046173_171046363_171049813_171049951_171050063_171050175_171053760_171053854_171055082_171055173_171056470_171056567_171058150_171058198_171061080_171061157_171081639_171081709_171082780_171082853_171117738_171117858_171160289
H1_mix_00051990	chr2	-	9593	10	FSM	ENSG00000123600.21	ENST00000375258.9	9770	10	0	177	0	-177	multi-exon	FALSE	canonical	3	40	junction_9	24.0744729311688	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGAGGAATTTGGCTTGG	26	True	NA	NA	False	NA	NA	NA	171433990	171315922	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_171324363_171325840_171325907_171326041_171326149_171330558_171330699_171331803_171331868_171337452_171337503_171339183_171339555_171360421_171360514_171392042_171392198_171433882
H1_mix_00051991	chr2	-	9586	10	FSM	ENSG00000123600.21	ENST00000612742.5	9791	10	28	177	6	-177	multi-exon	FALSE	canonical	3	38	junction_9	24.588966711731	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGAGGAATTTGGCTTGG	5	True	NA	NA	False	NA	NA	NA	171434774	171315922	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_171324363_171325840_171325907_171326041_171326149_171330558_171330699_171331803_171331868_171337452_171337503_171339183_171339555_171360421_171360514_171392042_171392198_171434673
H1_mix_00051995	chr2	-	447	1	FSM	ENSG00000233762.3	ENST00000433675.1	447	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTCAGCTAATAAAGGCG	20	False	NA	-49	True	NA	NA	NA	171517716	171517269	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_171517300_171517700
H1_mix_00052000	chr2	-	11714	7	FSM	ENSG00000172845.18	ENST00000310015.12	11714	7	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_6	126.547421941342	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTACACATCCTTTATTG	-5	True	NA	-5	True	AATAAA	-19	NA	173965373	173900774	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_173910258_173913069_173913267_173918592_173918786_173954872_173956233_173963760_173963884_173964404_173964554_173965164
H1_mix_00052002	chr2	-	4318	11	FSM	ENSG00000138430.16	ENST00000284719.8	4251	11	-67	0	0	0	multi-exon	FALSE	canonical	3	715	junction_10	67.8810724723763	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGAGTGACTTTTTTGT	-10	True	NA	-6	True	AATAAA	-15	NA	174248599	174072446	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_174075528_174078967_174079091_174081151_174081249_174081923_174082065_174123179_174123278_174123594_174123676_174141824_174142001_174223032_174223161_174229307_174229452_174246714_174246816_174248451
H1_mix_00052003	chr2	-	1656	10	FSM	ENSG00000138430.16	ENST00000344357.9	1656	10	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_9	259.493999550027	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGGTGTGTTTGGGGA	-10	True	NA	-3	True	AATAAA	-16	NA	174248599	174075007	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_174075528_174078967_174079091_174081151_174081249_174081923_174082065_174123179_174123278_174123594_174123676_174141824_174142001_174223032_174223161_174229307_174229452_174248451
H1_mix_00052005	chr2	-	2803	3	FSM	ENSG00000138433.16	ENST00000464393.1	469	3	-157	-2177	-157	1064	multi-exon	FALSE	canonical	3	178	junction_1	33.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTGATCGTACCAGTG	NA	False	NA	NA	False	ATTAAA	-15	NA	174352120	174346957	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_174349173_174350659_174350746_174351618
H1_mix_00052006	chr2	-	2987	10	NNC	ENSG00000138433.16	novel	1918	10	NA	NA	-4	1064	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	89.1079245758884	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTGATCGTACCAGTG	-35	True	NA	NA	False	ATTAAA	-15	NA	174395716	174346957	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_174349173_174350659_174350746_174351618_174351726_174378922_174379041_174380201_174380251_174380650_174380716_174380803_174380817_174381704_174381778_174387684_174387780_174395550
H1_mix_00052007	chr2	-	1912	10	FSM	ENSG00000138433.16	ENST00000342016.8	1918	10	6	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	89.1079245758884	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCCTTTAGGTGTTTTGT	-25	True	NA	-5	True	AATAAA	-17	NA	174395706	174348021	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_174349173_174350659_174350746_174351618_174351726_174378922_174379041_174380201_174380251_174380650_174380716_174380803_174380815_174381703_174381778_174387684_174387780_174395550
H1_mix_00052010	chr2	-	3696	6	NIC	ENSG00000115935.18	novel	2003	8	NA	NA	0	9	intron_retention	FALSE	canonical	2	2	junction_3	17.6022725805505	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGGTTTTTCTTTTAAG	8	True	NA	1	True	AATAAA	-26	NA	174682883	174559562	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_174562603_174567069_174567184_174567860_174568074_174581309_174581440_174585522_174585612_174682773
H1_mix_00052013	chr2	-	2232	7	FSM	ENSG00000128656.15	ENST00000295497.12	2232	7	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_2	30.0578146614524	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTTTGTTTACTGTTAA	10	True	NA	44	True	ATTAAA	-20	NA	174847555	174799312	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_174800288_174801706_174801813_174808904_174809043_174811510_174811589_174812308_174812483_174824433_174824519_174846879
H1_mix_00052014	chr2	-	2586	14	NIC	ENSG00000128656.15	novel	3156	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	29	junction_7	101.085235579045	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAAATACTGAGTACTTC	-1	True	NA	18	True	NA	NA	NA	175005263	174799338	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_174800288_174801706_174801813_174808904_174809043_174811510_174811589_174812308_174812483_174824433_174824519_174846879_174846958_174875787_174875866_174877839_174878129_174915057_174915172_174918533_174918566_174944887_174944944_174952163_174952203_175004893
H1_mix_00052015	chr2	-	2470	14	NIC	ENSG00000128656.15	novel	3156	13	NA	NA	0	-14	combination_of_known_junctions	FALSE	canonical	3	155	junction_7	62.1534653453681	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTGGCCATTTATTAA	17	True	NA	4	True	NA	NA	NA	175005364	174799352	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_174800288_174801706_174801813_174808904_174809043_174811510_174811589_174812308_174812483_174824433_174824519_174846879_174846958_174877839_174878129_174915057_174915172_174918533_174918566_174944887_174944944_174952163_174952203_175004893_175005081_175005205
H1_mix_00052016	chr2	-	1851	8	FSM	ENSG00000128656.15	ENST00000650731.1	1719	8	41	-173	0	0	multi-exon	FALSE	canonical	3	14	junction_7	109.336962773672	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAAATACTGAGTACTTC	10	True	NA	18	True	NA	NA	NA	174847555	174799338	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_174800288_174801706_174801813_174808904_174809043_174811510_174811589_174812308_174812483_174824433_174824519_174846879_174846958_174847312
H1_mix_00052017	chr2	-	2704	15	NIC	ENSG00000128656.15	novel	3156	13	NA	NA	-98	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_11	92.2533114277626	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTTTGTTTACTGTTAA	NA	False	NA	44	True	ATTAAA	-20	NA	175005479	174799312	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_174800288_174801706_174801813_174808904_174809043_174811510_174811589_174812308_174812483_174824433_174824519_174846879_174846958_174877839_174878129_174915057_174915172_174918533_174918566_174940815_174940895_174944887_174944944_174952163_174952203_175004893_175005081_175005205
H1_mix_00052018	chr2	-	2269	13	NIC	ENSG00000128656.15	novel	3156	13	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	5	junction_10	95.6142423142773	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCATTTTCTGTTAAATTA	19	True	NA	-19	True	AATAAA	-32	NA	175005362	174799495	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_174800288_174801706_174801813_174808904_174809043_174811510_174811589_174812308_174812483_174824433_174824519_174846879_174846958_174877839_174878129_174915057_174915172_174918533_174918566_174952163_174952203_175004893_175005081_175005205
H1_mix_00052019	chr2	-	2094	13	NIC	ENSG00000128656.15	novel	3156	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_7	83.9464114777993	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAAATACTGAGTACTTC	-1	True	NA	18	True	NA	NA	NA	175005263	174799338	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_174800288_174801706_174801813_174808904_174809043_174811510_174811589_174812308_174812483_174824433_174824519_174846879_174846958_174915057_174915172_174918533_174918566_174944887_174944944_174952163_174952203_175004893_175005081_175005205
H1_mix_00052025	chr2	-	4173	14	FSM	ENSG00000115966.18	ENST00000264110.7	4164	14	0	-9	0	0	multi-exon	FALSE	canonical	3	106	junction_9	35.5021459473073	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTGTTCTCTTACCTT	-39	True	NA	-4	True	AATAAA	-26	NA	175168203	175072249	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_175074836_175080659_175080766_175093060_175093268_175097443_175097594_175111567_175111655_175113993_175114109_175114689_175114869_175117989_175118119_175118250_175118370_175121443_175121541_175130137_175130208_175136411_175136487_175151059_175151159_175168049
H1_mix_00052030	chr2	-	795	5	FSM	ENSG00000154518.10	ENST00000409194.5	795	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	1483.81743738911	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGAGGAAGCTACAGCAG	-3	True	NA	65	True	NA	NA	NA	175181710	175178066	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_175178403_175179056_175179251_175180097_175180179_175181354_175181484_175181655
H1_mix_00052031	chr2	-	842	4	FSM	ENSG00000154518.10	ENST00000392541.3	842	4	0	0	0	0	multi-exon	FALSE	canonical	3	3219	junction_1	156.889203650928	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTCTGTGATTTGTAC	4	True	NA	-13	True	ATTAAA	-14	NA	175181663	175178144	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_175178403_175179056_175179251_175180097_175180179_175181354
H1_mix_00052032	chr2	-	7564	13	FSM	ENSG00000144320.14	ENST00000272748.9	7542	13	0	-22	0	22	multi-exon	FALSE	canonical	3	38	junction_10	9.05960202706989	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTGTCTCATCCTAATT	5	True	NA	1	True	ATTAAA	-18	NA	176002267	175923859	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_175930200_175937343_175937515_175938312_175938384_175939551_175939658_175947479_175947693_175964371_175964424_175964505_175964590_175970763_175970805_175979809_175979869_175992230_175992419_175993181_175993224_175995557_175995647_176002159
H1_mix_00052034	chr2	-	464	3	FSM	ENSG00000237380.7	ENST00000426965.1	927	3	221	242	-110	-242	multi-exon	FALSE	canonical	0	0	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACAAGCAGATGGGGCAA	15	True	NA	NA	False	AATAAA	-15	NA	176136877	176134847	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_176134951_176135318_176135423_176136620
H1_mix_00052035	chr2	-	4060	3	FSM	ENSG00000224189.8	ENST00000416928.8	4095	3	35	0	-4	0	multi-exon	FALSE	canonical	0	0	junction_2	3.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTTCGGGGCCTTCCA	-3	True	NA	0	True	AATAAA	-25	NA	176178103	176173188	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_176176693_176177331_176177495_176177710
H1_mix_00052036	chr2	-	345	1	FSM	ENSG00000218175.2	ENST00000405359.2	345	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	274	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTTTTATAACGTGTTC	126	False	NA	NA	False	NA	NA	NA	176201252	176200907	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_176200900_176201300
H1_mix_00052037	chr2	-	1155	3	FSM	ENSG00000163364.10	ENST00000295549.9	1424	3	0	269	0	-192	multi-exon	FALSE	canonical	2	2	junction_1	1.5	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATAGTGTAACTTTAATGT	254	False	NA	NA	False	AATAAA	-16	NA	176637931	176629840	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_176630433_176633032_176633126_176637461
H1_mix_00052039	chr2	-	1808	2	FSM	ENSG00000229337.2	ENST00000654107.1	1818	2	10	0	10	0	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTGACAGAGCGAGATTC	736	False	NA	NA	False	NA	NA	NA	177212557	177210570	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_177212318_177212496
H1_mix_00052041	chr2	-	2449	5	FSM	ENSG00000116044.16	ENST00000397062.8	2446	5	0	-3	0	0	multi-exon	FALSE	canonical	3	296	junction_1	21.6491916708223	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTGGGATTCCTTTGA	10	True	NA	-3	True	AATAAA	-24	NA	177264727	177230304	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_177232009_177232391_177232584_177233249_177233340_177234004_177234272_177264531
H1_mix_00052042	chr2	-	1382	3	FSM	ENSG00000116044.16	ENST00000423513.5	1382	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	145	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATGAGTACTGCCCATGC	-9	True	NA	NA	False	NA	NA	NA	177263454	177232276	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_177233340_177234004_177234272_177263402
H1_mix_00052043	chr2	-	3477	5	Fusion	ENSG00000280374.1_ENSG00000213963.6	novel	670	2	NA	NA	-3	19	multi-exon	FALSE	canonical	0	0	junction_1	7.76208734813001	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTGACAGATGAGATAGG	4	True	NA	18	True	AATAAA	-38	NA	177392684	177317695	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr2_-_177320725_177323299_177323397_177334392_177334530_177338597_177338700_177392572
H1_mix_00052046	chr2	-	1770	8	FSM	ENSG00000180228.14	ENST00000325748.9	1770	8	0	0	0	0	multi-exon	FALSE	canonical	3	676	junction_2	100.020610121013	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTAATGGGTTACTTCCT	-27	True	NA	-30	True	AATAAA	-33	NA	178451175	178431413	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178447504_178447587_178450241_178450412_178450965
H1_mix_00052047	chr2	-	3762	5	FSM	ENSG00000180228.14	ENST00000676586.1	3741	5	0	-21	0	0	multi-exon	FALSE	canonical	3	676	junction_2	131.063677271775	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTAATGGGTTACTTCCT	4194	False	NA	-30	True	AATAAA	-33	NA	178446954	178431413	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421
H1_mix_00052049	chr2	-	2108	6	FSM	ENSG00000180228.14	ENST00000457633.2	2103	6	0	-5	0	0	multi-exon	FALSE	canonical	1	9	junction_4	335.062143489831	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	89	False	NA	-51	True	AATAAA	-12	NA	178451059	178431434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178447504_178447587_178450241
H1_mix_00052050	chr2	-	1567	7	FSM	ENSG00000180228.14	ENST00000678845.1	1546	7	0	-21	0	0	multi-exon	FALSE	canonical	3	105	junction_6	292.820432271308	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTAATGGGTTACTTCCT	6	True	NA	-30	True	AATAAA	-33	NA	178451142	178431413	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178447504_178447587_178450965
H1_mix_00052051	chr2	-	1645	8	FSM	ENSG00000180228.14	ENST00000678053.1	1645	8	0	0	0	0	multi-exon	TRUE	canonical	3	38	junction_5	352.514408447747	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	2	True	NA	-51	True	AATAAA	-12	NA	178451146	178431434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178447455_178447587_178450365_178450412_178450965
H1_mix_00052053	chr2	-	1616	9	FSM	ENSG00000180228.14	ENST00000424699.5	1616	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_6	358.629487598273	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATTTCAGGGAACATGAT	-3	True	NA	-123	True	NA	NA	NA	178451151	178431653	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178445425_178445536_178447504_178447587_178450241_178450412_178450965
H1_mix_00052054	chr2	-	3899	5	FSM	ENSG00000180228.14	ENST00000677806.1	3890	5	0	-9	0	9	multi-exon	FALSE	canonical	3	828	junction_4	44.2005373270507	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAATTGGTTAAATCTTC	NA	False	NA	NA	False	NA	NA	NA	178451278	178440129	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_178443385_178444421_178444501_178447504_178447587_178450241_178450412_178450965
H1_mix_00052057	chr2	-	2869	4	FSM	ENSG00000079150.19	ENST00000424785.7	2876	4	0	7	0	-7	multi-exon	FALSE	canonical	3	46	junction_2	14.7044966667418	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATACAATACAGTGTACAAG	-24	True	NA	NA	False	AATAAA	-16	NA	178478600	178463670	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_178465932_178469651_178469786_178477061_178477214_178478278
H1_mix_00052058	chr2	-	1103	3	FSM	ENSG00000079150.19	ENST00000464248.1	1103	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	31.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGATAGTTGTATATCTC	23	True	NA	NA	False	TATAAA	-40	NA	178478553	178465255	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_178465932_178477061_178477214_178478278
H1_mix_00052059	chr2	-	1030	5	FSM	ENSG00000079150.19	ENST00000233092.10	1030	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	36.1317035302793	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCAGGAATGGTATGACT	1	True	NA	-14	True	AATAAA	-25	NA	178478575	178465598	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_178465932_178469651_178469786_178473028_178473143_178477061_178477214_178478278
H1_mix_00052065	chr2	-	9131	24	FSM	ENSG00000163492.16	ENST00000443758.7	9205	24	74	0	-4	0	multi-exon	FALSE	canonical	3	30	junction_6	7.92712554906881	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCTGATATTGTGTCAAT	32	True	NA	-2	True	AATAAA	-17	NA	179050063	178829756	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_178834441_178836893_178837745_178845625_178845743_178850048_178850162_178853440_178853625_178855346_178855542_178856256_178856398_178865766_178865917_178868025_178868206_178869116_178869306_178871426_178871553_178872132_178872313_178877963_178878144_178884900_178885093_178886751_178886872_178888526_178888669_178905328_178905502_178918712_178918908_178944534_178944652_178961229_178961484_178975056_178975166_178978483_178978676_179047283_179047407_179049839
H1_mix_00052067	chr2	-	3795	13	FSM	ENSG00000163492.16	ENST00000343876.6	3795	13	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	7.07646726049721	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTCAGATGTGTTTCTT	142	False	NA	NA	False	ATTAAA	-24	NA	178884951	178835755	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_178837745_178845625_178845743_178850048_178850162_178853440_178853625_178855346_178855542_178856256_178856398_178865766_178865917_178868025_178868206_178869116_178869306_178871426_178871553_178872132_178872313_178877963_178878144_178884900
H1_mix_00052068	chr2	-	10647	18	FSM	ENSG00000187231.14	ENST00000428443.8	10671	18	10	14	10	-14	multi-exon	FALSE	canonical	3	86	junction_16	11.7811649572895	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTCAATATCAACACTTG	-20	True	NA	NA	False	AATAAA	-19	NA	179264822	179101691	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_179110029_179112723_179112846_179115064_179115257_179116667_179116791_179117531_179117614_179121769_179121930_179123714_179123830_179124363_179124559_179132303_179132427_179143591_179143804_179146401_179146458_179149296_179149395_179151277_179151392_179172119_179172234_179176447_179176539_179183079_179183189_179191786_179191867_179264498
H1_mix_00052071	chr2	-	1741	3	ISM	ENSG00000144331.20	ENST00000410066.7	3395	10	245	326499	245	1049	5prime_fragment	FALSE	canonical	3	33	junction_1	6	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTCAAGCCAAATCTAACT	243	False	179861382	-16	True	AATAAA	-11	NA	179861367	179768480	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_179769803_179770520_179770673_179861100
H1_mix_00052072	chr2	-	2392	20	FSM	ENSG00000163510.14	ENST00000404136.2	2392	20	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_13	34.9156482551132	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAGACAAGAACACGG	-8	True	NA	-89	True	GATAAA	-40	NA	180007113	179945620	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_179945716_179950511_179950733_179950824_179950927_179952470_179952599_179954204_179954358_179954956_179955035_179959021_179959083_179964546_179964629_179965877_179965983_179970500_179970564_179970649_179970857_179970940_179971077_179973192_179973247_179973633_179973803_179978189_179978319_179981751_179981998_179986694_179986806_179988576_179988645_179993314_179993455_180007069
H1_mix_00052073	chr2	-	548	1	FSM	ENSG00000226564.1	ENST00000434913.1	548	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCAGGCTAATTTCCCCA	150	False	NA	NA	False	AATGAA	-7	NA	180873414	180872866	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_180872900_180873400
H1_mix_00052075	chr2	-	2639	6	FSM	ENSG00000162998.5	ENST00000295113.5	2637	6	0	-2	0	2	multi-exon	FALSE	canonical	3	540	junction_4	26.20381651592	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTATGTTTCCTTCTACA	4	True	NA	2	True	AATAAA	-21	NA	182866637	182833272	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_182834966_182837947_182838012_182838408_182838614_182842477_182842544_182858785_182858834_182866074
H1_mix_00052082	chr2	-	3821	8	FSM	ENSG00000003436.16	ENST00000392365.5	3649	8	-172	0	-160	0	multi-exon	FALSE	canonical	3	82	junction_7	26.9640728468419	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTGTTGTACTCGTAA	6806	False	NA	NA	False	AGTAAA	-24	NA	187513813	187464229	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_187467043_187467752_187467933_187484123_187484217_187484810_187484988_187488336_187488376_187496880_187497079_187503647_187503771_187513615
H1_mix_00052083	chr2	-	3859	8	FSM	ENSG00000003436.16	ENST00000233156.9	3859	8	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_7	36.9815177225222	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTGTTGTACTCGTAA	13	True	NA	NA	False	AGTAAA	-24	NA	187554435	187464229	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_187467043_187467752_187467933_187484123_187484217_187484810_187484988_187488336_187488376_187496880_187497079_187503647_187503771_187554199
H1_mix_00052086	chr2	-	1095	7	FSM	ENSG00000003436.16	ENST00000339091.8	1088	7	0	-7	0	0	multi-exon	FALSE	canonical	3	21	junction_1	54.5356662092698	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTCTTCTCACTGCACC	10	True	NA	NA	False	AATAAA	-27	NA	187554438	187478577	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_187478804_187484123_187484217_187484810_187484988_187488336_187488376_187496880_187497079_187503647_187503771_187554199
H1_mix_00052089	chr2	-	668	3	ISM	ENSG00000003436.16	ENST00000421427.5	804	5	0	32298	0	-32163	5prime_fragment	FALSE	canonical	3	23	junction_2	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTCTGATGCAGCATTCT	0	True	NA	NA	False	AATAAA	-14	NA	187565760	187529178	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_187529486_187554199_187554350_187565549
H1_mix_00052090	chr2	-	3118	2	NNC	ENSG00000003436.16	novel	804	5	NA	NA	0	-60951	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTCTTCACACGGATGC	0	True	NA	9	True	AATAAA	-32	NA	187565760	187557966	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_187560874_187565549
H1_mix_00052091	chr2	-	681	2	NNC	ENSG00000003436.16	novel	804	5	NA	NA	-49	-60961	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	-1	True	AATAAA	-22	NA	187565809	187557976	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_187558398_187565549
H1_mix_00052095	chr2	-	704	8	FSM	ENSG00000204262.14	ENST00000470524.2	704	8	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_5	12.4261081302758	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTGTGCCTATGAGATA	NA	False	NA	NA	False	AATAAA	-7	NA	189063038	189056765	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_189057027_189057319_189057428_189058428_189058528_189058848_189058894_189060729_189060784_189061561_189061616_189062864_189062919_189063009
H1_mix_00052096	chr2	-	3330	8	FSM	ENSG00000138449.11	ENST00000261024.7	3330	8	0	0	0	0	multi-exon	FALSE	canonical	3	578	junction_3	51.5957599903286	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCCTGAATTCTGTTCC	-2	True	NA	-9	True	TATAAA	-20	NA	189580786	189560589	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_189562192_189563583_189564226_189565353_189565600_189571714_189571842_189572845_189572962_189575160_189575321_189579812_189579881_189580417
H1_mix_00052097	chr2	-	1006	4	FSM	ENSG00000138449.11	ENST00000479598.5	993	4	0	-13	0	13	multi-exon	FALSE	canonical	3	603	junction_2	34.1207007873845	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGCGTTCCTCCAATAA	3223	False	NA	NA	False	AATAAA	-29	NA	189580741	189572507	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_189572962_189575160_189575321_189579812_189579881_189580417
H1_mix_00052098	chr2	-	2043	9	NIC	ENSG00000128694.12	novel	1910	9	NA	NA	5	0	intron_retention	FALSE	canonical	3	67	junction_1	18.0481127822274	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGGAATCCTTTCATTC	16	True	NA	-7	True	AATAAA	-18	NA	189762762	189746659	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_189747332_189750549_189750657_189752652_189752725_189752848_189752980_189753915_189754065_189754140_189754346_189755172_189755561_189761419_189761661_189762684
H1_mix_00052102	chr2	-	2807	5	FSM	ENSG00000128699.14	ENST00000392349.9	2150	5	21	-678	0	678	multi-exon	FALSE	canonical	3	148	junction_4	502.831171965303	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGACCTGCCCCCATC	8	True	NA	NA	False	NA	NA	NA	189784318	189769588	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_189771903_189775564_189775717_189782421_189782603_189783013_189783124_189784268
H1_mix_00052103	chr2	-	2693	3	FSM	ENSG00000128699.14	ENST00000325795.7	2692	3	0	-1	0	0	multi-exon	FALSE	canonical	3	1176	junction_1	25	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAAAAGCCCTCCAAATT	1211	False	NA	-15	True	AATAAA	-23	NA	189783382	189770322	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_189771903_189775564_189775717_189782421
H1_mix_00052104	chr2	-	2009	4	FSM	ENSG00000128699.14	ENST00000392350.7	2009	4	0	0	0	0	multi-exon	FALSE	canonical	3	702	junction_3	236.114849643605	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAAAAGCCCTCCAAATT	2	True	NA	-15	True	AATAAA	-23	NA	189784364	189770322	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_189771903_189775564_189775717_189782421_189782603_189784268
H1_mix_00052105	chr2	-	1223	3	FSM	ENSG00000128699.14	ENST00000409519.5	1223	3	0	0	0	0	multi-exon	FALSE	canonical	3	702	junction_2	262	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTGACAAATAAAAAAATGT	8	True	NA	NA	False	NA	NA	NA	189784318	189774724	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_189775717_189782421_189782603_189784268
H1_mix_00052106	chr2	-	2458	14	FSM	ENSG00000198130.16	ENST00000359678.10	2434	14	0	-24	0	24	multi-exon	FALSE	canonical	3	559	junction_10	36.0223467788486	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTAGAAACTAAGTGAAC	0	True	NA	NA	False	AATAAA	-40	NA	190319826	190203895	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_190205233_190208879_190208914_190212955_190213076_190244886_190244969_190246153_190246213_190249639_190249727_190252161_190252308_190261155_190261235_190287585_190287639_190290404_190290486_190294545_190294631_190296812_190296954_190310753_190310797_190319715
H1_mix_00052107	chr2	-	2432	13	FSM	ENSG00000198130.16	ENST00000392332.7	2463	13	31	0	31	0	multi-exon	FALSE	canonical	3	69	junction_1	156.314764355628	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATAGTTTCTCCTTCATCC	-3	True	NA	NA	False	AATAAA	-15	NA	190319859	190203920	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_190205233_190212955_190213076_190244886_190244969_190246153_190246213_190249639_190249727_190252161_190252308_190261155_190261235_190287585_190287639_190290404_190290486_190294545_190294631_190296812_190296954_190310753_190310797_190319715
H1_mix_00052108	chr2	-	1412	15	NIC	ENSG00000198130.16	novel	2434	14	NA	NA	4	-6	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	145.818677592049	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGATACTGTGTTAATG	4	True	NA	-15	True	AATAAA	-15	NA	190319822	190204640	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_190204803_190205099_190205233_190208879_190208914_190212955_190213076_190244886_190244969_190246153_190246213_190249639_190249727_190252161_190252308_190261155_190261235_190287585_190287639_190290404_190290486_190294545_190294631_190296812_190296954_190310753_190310797_190319715
H1_mix_00052112	chr2	-	6172	9	FSM	ENSG00000189362.12	ENST00000409150.8	6172	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	5.26782687642637	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGGTTGGGGAAATGAGA	2	True	NA	NA	False	AATAAA	-15	NA	190534722	190504337	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_190509313_190510360_190510538_190514452_190514679_190516269_190516385_190517519_190517614_190518735_190518809_190518951_190519184_190525262_190525379_190534558
H1_mix_00052113	chr2	-	4116	25	FSM	ENSG00000115415.20	ENST00000361099.8	4116	25	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_12	22.8846367072371	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGAGGTTTAGCTGTCA	9	True	NA	-6	True	ATTAAA	-17	NA	191014171	190969148	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_190970718_190974829_190974933_190975811_190975888_190976839_190977026_190978855_190979002_190979771_190979867_190980619_190980670_190982382_190982519_190983641_190983741_190984309_190984394_190985618_190985661_190986853_190986948_190987038_190987069_190989614_190989675_190991227_190991321_190995060_190995220_190997855_190998008_190998216_190998309_190999625_190999705_191001073_191001164_191007562_191007662_191008962_191009108_191009875_191010005_191013524_191013679_191014017
H1_mix_00052114	chr2	-	3385	24	FSM	ENSG00000115415.20	ENST00000673952.1	3385	24	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_11	23.3553141583001	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATATCCTGAGTTATT	6789	False	NA	NA	False	TTTAAA	-19	NA	191014228	190974048	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_190974933_190975811_190975888_190976839_190977026_190978855_190979002_190979771_190979867_190980619_190980670_190982382_190982519_190983641_190983741_190984309_190984394_190985618_190985661_190986853_190986948_190987038_190987069_190989614_190989675_190991227_190991321_190995060_190995220_190997855_190998008_190998216_190998309_190999625_190999705_191001073_191001164_191007562_191007662_191008962_191009108_191009875_191010005_191013524_191013679_191014017
H1_mix_00052115	chr2	-	2716	23	FSM	ENSG00000115415.20	ENST00000392322.7	2716	23	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_10	23.7091972250823	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGTGGGAAAGTAGTTCT	12	True	NA	-3	True	AATAAA	-17	NA	191014168	190975536	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_190975888_190976839_190977026_190978855_190979002_190979771_190979867_190980619_190980670_190982382_190982519_190983641_190983741_190984309_190984394_190985618_190985661_190986853_190986948_190987038_190987069_190989614_190989675_190991227_190991321_190995060_190995220_190997855_190998008_190998216_190998309_190999625_190999705_191001073_191001164_191007562_191007662_191008962_191009108_191009875_191010005_191013524_191013679_191014017
H1_mix_00052116	chr2	-	2621	22	FSM	ENSG00000115415.20	ENST00000673841.1	2625	22	3	1	0	0	multi-exon	FALSE	canonical	3	9	junction_21	53.7137791262839	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGTGGGAAAGTAGTTC	6789	False	NA	-4	True	AATAAA	-16	NA	191014228	190975537	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_190975888_190976839_190977026_190978855_190979002_190979771_190979867_190980619_190980670_190982382_190982519_190983641_190983741_190984309_190984394_190985618_190985661_190986853_190986948_190987038_190987069_190989614_190989675_190991227_190991321_190995060_190995220_190997855_190998008_190998216_190998309_190999625_190999705_191001073_191001164_191007562_191007662_191008962_191009108_191009875_191010005_191014017
H1_mix_00052117	chr2	-	2723	24	FSM	ENSG00000115415.20	ENST00000392323.6	2723	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	70.7434460616708	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGCCAA	-17	True	NA	-108	True	NA	NA	NA	191014197	190975641	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_190975888_190976839_190977026_190978855_190979002_190979771_190979867_190980619_190980670_190982382_190982519_190983641_190983741_190984309_190984394_190985618_190985661_190986853_190986948_190987038_190987069_190989614_190989675_190991227_190991321_190995060_190995220_190997855_190998008_190998216_190998309_190999625_190999705_191001073_191001164_191007562_191007662_191008962_191009108_191009875_191010005_191010366_191010450_191013524_191013679_191014017
H1_mix_00052121	chr2	-	474	1	FSM	ENSG00000280083.1	ENST00000623836.1	1953	1	541	938	541	-938	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAGAAGTTAGGTAACTT	NA	False	NA	NA	False	NA	NA	NA	191155529	191155055	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_191155100_191155500
H1_mix_00052122	chr2	-	2690	10	FSM	ENSG00000144339.12	ENST00000392314.5	2842	10	0	152	0	-149	multi-exon	FALSE	canonical	2	2	junction_1	8.60376030338042	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTATCACAACTTGATCT	7	True	NA	NA	False	NA	NA	NA	192194916	191949194	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_191950465_191953678_191953838_191956254_191956379_191998261_191998322_191999059_191999209_192057678_192057776_192179667_192179695_192184353_192184484_192191879_192191990_192194352
H1_mix_00052123	chr2	-	2664	10	FSM	ENSG00000144339.12	ENST00000272771.10	2799	10	0	135	0	-135	multi-exon	TRUE	canonical	2	9	junction_5	7.4103697780147	1079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATCTGGAAAAAATAAGCT	-10	True	NA	NA	False	NA	NA	NA	192194933	191949180	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_191950408_191953678_191953838_191956254_191956379_191998261_191998322_191999059_191999209_192057678_192057776_192179667_192179695_192184353_192184484_192191879_192191990_192194352
H1_mix_00052126	chr2	-	2916	3	FSM	ENSG00000138411.13	ENST00000642318.1	3479	3	582	-19	582	0	multi-exon	FALSE	canonical	3	11	junction_1	1	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAACTTTTCACTTGTTT	NA	False	NA	-12	True	AATACA	-17	NA	196217677	196199255	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_196201389_196215864_196215978_196217007
H1_mix_00052128	chr2	-	4549	18	FSM	ENSG00000119041.11	ENST00000263956.8	4261	18	24	-312	0	312	multi-exon	FALSE	canonical	3	218	junction_8	32.8476613799443	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGACCTCGTAATTCGC	27	True	NA	NA	False	NA	NA	NA	196799659	196762722	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_196764686_196766564_196766718_196769914_196770040_196771747_196771939_196772915_196773154_196775115_196775252_196776009_196776112_196776426_196776630_196778895_196779068_196780558_196780663_196784856_196784930_196785440_196785589_196789203_196789370_196789878_196790071_196791336_196791461_196792955_196793153_196797796_196797909_196799509
H1_mix_00052129	chr2	-	1736	9	FSM	ENSG00000119041.11	ENST00000409364.3	1736	9	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_7	19.0455867591419	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGGACATTGGCTGGTGA	27	True	NA	NA	False	AATAAA	-17	NA	196799659	196780088	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_196780663_196784856_196784930_196785440_196785589_196789203_196789370_196789878_196790071_196791336_196791461_196792955_196793153_196797796_196797909_196799509
H1_mix_00052134	chr2	-	633	1	Genic_Genomic	ENSG00000213104.3	novel	NA	NA	NA	NA	875	316	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	AATAAA	-20	NA	197380017	197379384	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr2_-_197379400_197380000
H1_mix_00052135	chr2	-	9283	25	FSM	ENSG00000115524.17	ENST00000652026.1	9283	25	0	0	0	0	multi-exon	TRUE	canonical	3	44	junction_21	419.691379666853	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGCAACTGTATATTTT	-20	True	NA	NA	False	AAAAAG	-15	NA	197435047	197388514	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_197392462_197392971_197393189_197396055_197396329_197397984_197398117_197398460_197398582_197400054_197400167_197400251_197400435_197400714_197400937_197401399_197401526_197401741_197401889_197401984_197402131_197402555_197402827_197402948_197403036_197403584_197403765_197405075_197405178_197405274_197405473_197407997_197408120_197408368_197408582_197409769_197410008_197416740_197416912_197418508_197418589_197418895_197420543_197421028_197421134_197423807_197423975_197434971
H1_mix_00052136	chr2	-	6463	25	FSM	ENSG00000115524.17	ENST00000335508.11	6463	25	0	0	0	0	multi-exon	TRUE	canonical	3	1439	junction_21	202.108018251792	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTAGTAGACCAATTTTT	-1	True	NA	-20	True	AATAAA	-17	NA	197435028	197389783	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_197392462_197392971_197393189_197396055_197396329_197397984_197398117_197398460_197398582_197400054_197400167_197400251_197400435_197400714_197400937_197401399_197401526_197401741_197401889_197401984_197402131_197402555_197402827_197402948_197403036_197403584_197403765_197405075_197405178_197405274_197405473_197407997_197408120_197408368_197408582_197409769_197410008_197416740_197416912_197418508_197418589_197420427_197420543_197421028_197421134_197423807_197423975_197434971
H1_mix_00052137	chr2	-	723	5	FSM	ENSG00000115524.17	ENST00000424674.1	723	5	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_4	795.814166435858	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTCAGGCAGTTATGGGA	4551	False	NA	NA	False	NA	NA	NA	197399028	197393051	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_197393189_197396055_197396329_197397984_197398117_197398460_197398582_197398968
H1_mix_00052139	chr2	-	2127	4	FSM	ENSG00000115524.17	ENST00000487698.5	2127	4	0	0	0	0	multi-exon	FALSE	canonical	3	1968	junction_2	121.962653664509	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTAGATGTTTGTGTT	NA	False	NA	-7	True	ATTAAA	-15	NA	197435079	197418795	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_197420543_197421028_197421134_197423807_197423975_197434971
H1_mix_00052141	chr2	-	2320	12	FSM	ENSG00000144381.18	ENST00000677454.1	2320	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	3104.87120079943	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTGTGTTAGCATTTC	4247	False	NA	NA	False	AATAAA	-16	NA	197498848	197486585	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197490526_197490665_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674
H1_mix_00052142	chr2	-	4931	9	FSM	ENSG00000144381.18	ENST00000461097.2	4930	9	0	-1	0	-1	multi-exon	FALSE	canonical	3	5516	junction_8	961.494637270536	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTGTGTTAGCATTTCC	3278	False	NA	NA	False	AATAAA	-17	NA	197499817	197486584	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197497393_197498674_197498851_197499781
H1_mix_00052143	chr2	-	3772	10	FSM	ENSG00000144381.18	ENST00000678969.1	3772	10	0	0	0	0	multi-exon	FALSE	canonical	1	2687	junction_6	1849.7446737387	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTGTGTTAGCATTTC	3216	False	NA	NA	False	AATAAA	-16	NA	197499879	197486585	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_197487199_197487857_197488037_197488316_197488492_197489001_197490297_197493323_197493493_197494156_197494251_197494656_197495377_197497139_197497393_197498674_197498851_197499781
H1_mix_00052144	chr2	-	3231	10	FSM	ENSG00000144381.18	ENST00000476746.6	3230	10	0	-1	0	-1	multi-exon	FALSE	canonical	3	5516	junction_9	945.691986501595	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTGTGTTAGCATTTCC	3215	False	NA	NA	False	AATAAA	-17	NA	197499880	197486584	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197495377_197497139_197497393_197498674_197498851_197499781
H1_mix_00052145	chr2	-	2201	11	FSM	ENSG00000144381.18	ENST00000676933.1	2200	11	0	-1	0	-1	multi-exon	FALSE	canonical	2	953	junction_7	2233.23398012837	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTGTGTTAGCATTTCC	3202	False	NA	NA	False	AATAAA	-17	NA	197499893	197486584	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197495293_197495377_197497139_197497393_197498674_197498851_197499781
H1_mix_00052146	chr2	-	2414	13	FSM	ENSG00000144381.18	ENST00000678621.1	2413	13	0	-1	0	-1	multi-exon	FALSE	canonical	0	0	junction_2	3057.32328007505	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTGTGTTAGCATTTCC	3177	False	NA	NA	False	AATAAA	-17	NA	197499918	197486584	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_197487199_197487287_197487380_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197499781
H1_mix_00052147	chr2	-	2210	11	FSM	ENSG00000144381.18	ENST00000679291.1	2210	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	3280.43481264298	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTGTGTTAGCATTTC	2971	False	NA	NA	False	AATAAA	-16	NA	197500124	197486585	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197499998
H1_mix_00052148	chr2	-	2408	12	FSM	ENSG00000144381.18	ENST00000452200.6	2407	12	0	-1	0	-1	multi-exon	FALSE	canonical	1	235	junction_11	2610.58026860753	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTGTGTTAGCATTTCC	2874	False	NA	NA	False	AATAAA	-17	NA	197500221	197486584	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197499998
H1_mix_00052149	chr2	-	2300	12	FSM	ENSG00000144381.18	ENST00000345042.6	2299	12	0	-1	0	-1	multi-exon	FALSE	canonical	1	186	junction_11	2621.74102458652	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTGTGTTAGCATTTCC	2821	False	NA	NA	False	AATAAA	-17	NA	197500274	197486584	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197500159
H1_mix_00052151	chr2	-	5302	9	FSM	ENSG00000162944.11	ENST00000295049.9	5419	9	0	117	0	-117	multi-exon	FALSE	canonical	0	0	junction_1	5.82559009886552	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGACGACTGCAAAAGAAAT	-1	True	NA	NA	False	CATAAA	-10	NA	197675587	197568340	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_197572281_197595990_197596070_197615875_197615980_197617799_197617922_197631010_197631221_197633717_197633998_197644157_197644273_197646482_197646667_197675319
H1_mix_00052152	chr2	-	5141	8	FSM	ENSG00000162971.11	ENST00000354611.9	5123	8	0	-18	0	18	multi-exon	FALSE	canonical	3	46	junction_6	29.1932337701595	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCCTATATCCTCAT	1	True	NA	17	True	ATTAAA	-33	NA	199955491	199928894	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_199933324_199935930_199936048_199936404_199936493_199938932_199939071_199940088_199940134_199943764_199943835_199948317_199948473_199955392
H1_mix_00052153	chr2	-	5383	8	FSM	ENSG00000162971.11	ENST00000483328.5	4287	8	0	-1096	0	34	multi-exon	TRUE	canonical	3	82	junction_6	18.8960637300417	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGCCTAGACCCTCCTT	NA	False	NA	33	True	NA	NA	NA	199955736	199928878	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_199933324_199935930_199936048_199936404_199936493_199938932_199939071_199940088_199940134_199943764_199943835_199948336_199948473_199955392
H1_mix_00052155	chr2	-	2985	7	FSM	ENSG00000155729.13	ENST00000359878.8	2939	7	-45	-1	-45	1	multi-exon	FALSE	canonical	3	28	junction_6	5.02493781056044	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTATTTTCTGTGTCTGTA	-12	True	NA	NA	False	AATAAA	-17	NA	200510113	200488956	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_200490617_200493171_200493275_200497752_200497848_200498890_200499085_200504747_200504960_200506856_200507092_200509627
H1_mix_00052156	chr2	-	1855	13	FSM	ENSG00000013441.17	ENST00000321356.9	1847	13	0	-8	0	8	multi-exon	TRUE	canonical	3	20	junction_9	41.1771241778194	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAGACTTCCTCAAGTC	-2	True	NA	65	True	ATTAAA	-22	NA	200864658	200853000	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_200853450_200853902_200853994_200854615_200854696_200855003_200855087_200856681_200856812_200856890_200856986_200857717_200857885_200857972_200858090_200859679_200859747_200860124_200860216_200861237_200861467_200861701_200861863_200864563
H1_mix_00052157	chr2	-	1687	12	FSM	ENSG00000013441.17	ENST00000432425.5	1682	12	0	-5	0	0	multi-exon	FALSE	canonical	3	70	junction_9	22.8686511760438	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTATCTGAACAGTTTGT	0	True	NA	-10	True	AATAAA	-23	NA	200864656	200853075	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_200853450_200853902_200853994_200854615_200854696_200855003_200855087_200856681_200856812_200856890_200856986_200857717_200857885_200857972_200858090_200859679_200859747_200861237_200861467_200861701_200861863_200864563
H1_mix_00052158	chr2	-	3213	11	FSM	ENSG00000013441.17	ENST00000473565.5	3208	11	0	-5	0	0	multi-exon	FALSE	canonical	3	87	junction_10	18.0986187318259	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTATCTGAACAGTTTGT	-4	True	NA	-10	True	AATAAA	-23	NA	200864691	200853075	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_200853450_200853902_200853994_200854615_200854696_200855003_200855087_200856681_200856812_200856890_200856986_200857717_200857885_200857972_200858090_200859679_200861467_200861701_200861863_200864563
H1_mix_00052160	chr2	-	1370	7	FSM	ENSG00000240344.9	ENST00000286175.12	1370	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	119.959368121043	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCATCTCCAAGATATC	8	True	NA	59	True	AATGAA	-18	NA	200889269	200870906	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_200871522_200876918_200877038_200881420_200881489_200885261_200885368_200885697_200885773_200887612_200887686_200888955
H1_mix_00052161	chr2	-	1222	6	FSM	ENSG00000240344.9	ENST00000465823.5	1222	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	99.6505895617281	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTATAAGGTATATATGA	1	True	NA	10	True	ATTAAA	-28	NA	200889276	200870955	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_200871522_200876918_200877038_200881420_200881489_200885697_200885773_200887612_200887686_200888955
H1_mix_00052162	chr2	-	1017	7	NIC	ENSG00000240344.9	novel	1166	7	NA	NA	0	-11	combination_of_known_junctions	FALSE	canonical	3	64	junction_6	82.8264584672206	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCAGGCTATGTGTATAA	1	True	NA	-1	True	ATTAAA	-38	NA	200889276	200870966	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_200871522_200876918_200877038_200881420_200881489_200882341_200882436_200885697_200885773_200887612_200887686_200889243
H1_mix_00052164	chr2	-	4288	18	FSM	ENSG00000115942.9	ENST00000234296.7	4288	18	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_8	23.047115875376	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTGGTAGTGCTGGTTT	1	True	NA	NA	False	AATAAA	-31	NA	200963660	200908976	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_200911388_200913294_200913414_200913930_200913993_200920221_200920394_200920992_200921140_200925835_200925933_200926767_200926901_200931338_200931449_200933875_200933975_200935698_200935893_200937905_200937967_200941247_200941280_200942684_200942778_200949553_200949644_200957400_200957545_200958029_200958134_200959391_200959441_200963489
H1_mix_00052165	chr2	-	9328	12	FSM	ENSG00000155744.10	ENST00000418596.7	9333	12	0	5	0	-5	multi-exon	FALSE	canonical	3	34	junction_11	12.6301488968668	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGATTTCCCTGAGTTGAT	-20	True	NA	-5	True	TATAAA	-25	NA	201071669	200973722	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_200981872_200988261_200988422_200992280_200992369_200992886_200993004_200997444_200997541_201008972_201009089_201011391_201011473_201016990_201017171_201022830_201022933_201023958_201024040_201045495_201045594_201071609
H1_mix_00052167	chr2	-	4962	2	FSM	ENSG00000155755.20	ENST00000495329.1	4435	2	-529	2	-529	-2	multi-exon	FALSE	canonical	3	508	junction_1	0	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTTTTGTTCTGTTTGC	5220	False	NA	-6	True	AATAAA	-16	NA	201626852	201620187	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_201624323_201626025
H1_mix_00052168	chr2	-	5312	12	NIC	ENSG00000155755.20	novel	5592	13	NA	NA	-1	0	combination_of_known_junctions	TRUE	canonical	1	36	junction_10	123.835868447109	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTGTTCTGTTTGCAT	4	True	NA	-4	True	AATAAA	-18	NA	201642671	201620185	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_201624323_201626025_201626148_201627320_201627415_201628075_201628150_201629229_201629422_201629728_201629853_201632050_201632209_201633310_201633432_201636747_201636886_201638988_201639046_201640892_201640925_201642608
H1_mix_00052169	chr2	-	3957	12	FSM	ENSG00000241790.2_ENSG00000155755.20	ENST00000286196.9	1805	12	-42	-2110	-23	0	multi-exon	FALSE	canonical	1	14	junction_11	160.82560751652	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCTGTCATTTCAATAAT	-33	True	NA	NA	False	NA	NA	NA	201643526	201621645	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_201624323_201626025_201626148_201627320_201627415_201628075_201628150_201629229_201629422_201629728_201629853_201632050_201632209_201633310_201633432_201636747_201636886_201638988_201639046_201640892_201640925_201643358
H1_mix_00052170	chr2	-	828	4	ISM	ENSG00000155755.20	ENST00000471318.6	1591	8	7491	195	1955	-126	3prime_fragment	FALSE	canonical	3	16	junction_2	223.306963617349	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATGGTAGAAGGGAAAAAA	2652	False	NA	-97	True	TATAAA	-33	NA	201629420	201623881	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_201624323_201626025_201626148_201628075_201628150_201629229
H1_mix_00052174	chr2	-	6571	34	FSM	ENSG00000003393.16	ENST00000681619.1	6597	34	33	-7	33	0	multi-exon	FALSE	canonical	3	30	junction_10	30.8883471687506	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTATGTGGTTGTTTTA	23	False	NA	-7	True	AATAAA	-9	NA	201781125	201700559	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_201701890_201704121_201704219_201704453_201704604_201705138_201705201_201705415_201705462_201706845_201707023_201707868_201707992_201709880_201710039_201710990_201711109_201715671_201715837_201718076_201718211_201723042_201723121_201723329_201723442_201724294_201724460_201725355_201725455_201726483_201726550_201726663_201726867_201727211_201727279_201727704_201727776_201728511_201728641_201729051_201729184_201733275_201733439_201738669_201738736_201741673_201741855_201744257_201744430_201746565_201746749_201749711_201749790_201753145_201753243_201754502_201754672_201757401_201757760_201760880_201761819_201767228_201767384_201768865_201768946_201780876
H1_mix_00052177	chr2	-	7609	33	FSM	ENSG00000003393.16	ENST00000680000.1	7604	33	0	-5	0	0	multi-exon	FALSE	canonical	3	104	junction_9	25.07736077496	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCCTGTAGTGGCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	201781158	201701789	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_201704219_201704453_201704604_201705138_201705201_201705415_201705462_201706845_201707023_201707868_201707992_201709880_201710039_201710990_201711109_201715671_201715840_201718076_201718211_201723042_201723121_201723329_201723442_201724294_201724460_201725355_201725455_201726483_201726550_201726663_201726867_201727211_201727279_201727704_201727776_201728511_201728641_201729051_201729184_201733275_201733439_201738669_201738736_201741673_201741855_201744257_201744430_201746565_201746749_201749711_201749790_201753145_201753243_201754502_201754672_201757401_201757760_201760880_201761819_201767228_201767384_201768865_201768946_201780876
H1_mix_00052178	chr2	-	3148	13	FSM	ENSG00000003393.16	ENST00000482789.6	3148	13	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_6	24.4692267053039	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTCATTTTATGAAACT	NA	False	NA	-23	True	AATAAA	-2	NA	201781158	201733049	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_201733439_201738669_201738736_201741673_201741855_201744257_201744430_201746565_201746749_201749711_201749790_201753145_201753243_201754502_201754672_201757401_201757760_201760880_201761819_201767228_201767384_201768865_201768946_201780876
H1_mix_00052179	chr2	-	3489	10	FSM	ENSG00000003393.16	ENST00000679939.1	3692	10	203	0	184	0	multi-exon	FALSE	canonical	3	104	junction_4	27.7706657562114	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCTTTCAGAAATGAAAAAT	812	False	NA	NA	False	NA	NA	NA	201768959	201740609	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_201741855_201744257_201744430_201746565_201746749_201749711_201749790_201753145_201753243_201754502_201754672_201757401_201757760_201760880_201761819_201767228_201767384_201768865
H1_mix_00052181	chr2	-	2682	4	FSM	ENSG00000003393.16	ENST00000467448.5	2677	4	0	-5	0	5	multi-exon	FALSE	canonical	3	149	junction_3	15.9234278833282	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTTCTATTACATTT	-27	True	NA	NA	False	ATTAAA	-21	NA	201780956	201759451	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_201761819_201767228_201767384_201768865_201768946_201780876
H1_mix_00052183	chr2	-	510	1	FSM	ENSG00000223825.5	ENST00000475212.1	503	1	98	-105	98	105	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGTTGTTGGGATGTCT	110	False	NA	NA	False	NA	NA	NA	202201788	202201278	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_202201300_202201800
H1_mix_00052184	chr2	-	1534	5	FSM	ENSG00000116030.17	ENST00000392246.7	1523	5	0	-11	0	11	multi-exon	FALSE	canonical	3	4507	junction_1	620.285821214704	1791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTATTGATAATTTCAGT	-16	True	NA	-1	True	AATAAA	-27	NA	202238597	202206170	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_202207322_202210734_202210807_202214356_202214435_202220031_202220107_202238439
H1_mix_00052185	chr2	-	1087	6	FSM	ENSG00000116030.17	ENST00000392245.5	1071	6	0	-16	0	11	multi-exon	FALSE	canonical	2	62	junction_1	2068.58778880665	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTATTGATAATTTCAGT	-18	True	NA	-1	True	AATAAA	-27	NA	202238599	202206170	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_202206804_202207252_202207322_202210734_202210807_202214356_202214435_202220031_202220107_202238439
H1_mix_00052186	chr2	-	1187	6	FSM	ENSG00000116030.17	ENST00000409368.5	1187	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	2602.50399423325	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTCTAATTTTCATTAG	-13	True	NA	NA	False	AAGAAA	-45	NA	202238594	202206649	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_202207322_202207867_202208003_202210734_202210807_202214356_202214435_202220031_202220107_202238439
H1_mix_00052187	chr2	-	831	4	FSM	ENSG00000116030.17	ENST00000392244.7	831	4	0	0	0	0	multi-exon	FALSE	canonical	3	1259	junction_3	1651.10717062488	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCAGGTTGAAGTCAAGA	15	True	NA	NA	False	TTTAAA	-30	NA	202238566	202206767	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_202207322_202210734_202210807_202214356_202214435_202238439
H1_mix_00052189	chr2	-	7968	13	FSM	ENSG00000163596.17	ENST00000358299.7	7961	13	0	-7	0	7	multi-exon	FALSE	canonical	2	9	junction_6	6.43072054024016	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTTCTCATAAAAAATTTA	0	True	NA	NA	False	AATAAA	-10	NA	202871766	202773168	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_202779649_202785917_202786008_202788829_202789088_202796889_202796965_202811745_202811790_202814701_202814785_202815910_202816010_202817417_202817544_202819700_202819900_202821357_202821482_202825694_202825768_202828847_202829017_202871618
H1_mix_00052192	chr2	-	8068	13	FSM	ENSG00000138442.11	ENST00000261015.5	8068	13	0	0	0	0	multi-exon	FALSE	canonical	3	550	junction_3	50.403924009501	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTTTAAAGGTGTTAAAT	-13	True	NA	NA	False	AGTAAA	-25	NA	202911673	202874260	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_202880938_202882710_202882784_202883608_202883742_202884197_202884304_202884394_202884536_202892616_202892703_202894580_202894627_202896064_202896220_202897299_202897416_202899530_202899638_202901024_202901120_202907864_202907960_202911435
H1_mix_00052194	chr2	-	4764	2	NNC	ENSG00000114933.16	novel	14128	11	NA	NA	50355	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCTTGTTTTTAGTTTAA	957	False	NA	-8	True	AATAAA	-14	NA	206012889	205993722	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_205998465_206012867
H1_mix_00052199	chr2	-	2631	18	FSM	ENSG00000023228.14	ENST00000423725.5	2631	18	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_16	100.988916449652	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAAGATTTAAGCACC	9	False	NA	76	True	ATTAAA	-21	NA	206159509	206123818	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_206124277_206126538_206126612_206126709_206126845_206127796_206127973_206130087_206130243_206132944_206133106_206138484_206138615_206141940_206142070_206142685_206142832_206144017_206144133_206144891_206145027_206146902_206147089_206147530_206147662_206147752_206147835_206149019_206149097_206149817_206149926_206153617_206153683_206159340
H1_mix_00052203	chr2	-	606	2	Antisense	novelGene_ENSG00000229321.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	114	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGGTGGTCTCTTCAC	19	False	NA	3	True	AATAAA	-24	NA	206812269	206806873	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_-_206807239_206812028
H1_mix_00052204	chr2	-	757	3	Antisense	novelGene_ENSG00000229321.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_2	36	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	19	False	NA	-5	True	AATAAA	-16	NA	206812269	206806881	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_-_206807239_206810036_206810196_206812028
H1_mix_00052205	chr2	-	699	3	Antisense	novelGene_ENSG00000229321.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_2	36	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	22	False	NA	-3	True	AATAAA	-18	NA	206812266	206806879	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_-_206807239_206810036_206810139_206812028
H1_mix_00052206	chr2	-	8646	4	FSM	ENSG00000118263.15	ENST00000309446.11	8365	4	-224	-57	14	57	multi-exon	FALSE	canonical	3	35	junction_1	1.63299316185545	157	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGGAAACAGGTGTCAGGA	5	True	NA	NA	False	NA	NA	NA	207166172	207074079	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_207081265_207088457_207088582_207123773_207124405_207165466
H1_mix_00052207	chr2	-	869	5	FSM	ENSG00000144401.14	ENST00000432416.5	869	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	246.536381696495	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTGGATTACAATCTTT	274	False	NA	NA	False	AATAAA	-23	NA	207625121	207580630	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_207580999_207581793_207581947_207621805_207621918_207624228_207624405_207625061
H1_mix_00052208	chr2	-	1682	2	FSM	ENSG00000144401.14	ENST00000477919.1	1611	2	0	-71	0	71	multi-exon	TRUE	canonical	3	26	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCCATAAAATGTCAGTAC	NA	False	NA	57	True	AATACA	-30	NA	207613026	207609042	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_207609766_207612067
H1_mix_00052209	chr2	-	4825	4	FSM	ENSG00000144401.14	ENST00000411432.5	4805	4	0	-20	0	19	multi-exon	FALSE	canonical	3	149	junction_3	210.073003183814	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTTCAACACAATTCTAAT	-3	True	NA	5	True	AATAAA	-36	NA	207625249	207609094	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_207613444_207621805_207621918_207624228_207624405_207625061
H1_mix_00052210	chr2	-	2632	5	NIC	ENSG00000144401.14	novel	4805	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	256.935181514716	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCATTCTGTGATATAC	17	False	NA	-15	True	AATAAA	-16	NA	207625378	207609114	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_207609766_207612067_207613444_207621805_207621918_207624228_207624405_207625061
H1_mix_00052211	chr2	-	2629	5	NIC	ENSG00000144401.14	novel	1103	4	NA	NA	-179	19	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	235.037629965927	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTTCAACACAATTCTAAT	NA	False	NA	5	True	AATAAA	-36	NA	207625558	207609094	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_207609766_207612067_207613444_207621805_207621918_207624228_207624405_207625264
H1_mix_00052212	chr2	-	1123	4	FSM	ENSG00000144401.14	ENST00000406927.6	1103	4	0	-20	0	0	multi-exon	FALSE	canonical	3	491	junction_3	51.3290041464538	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTAAATGAGTAAGCTT	17	False	NA	-6	True	AATAAA	-39	NA	207625378	207612722	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_207613444_207621805_207621918_207624228_207624405_207625264
H1_mix_00052213	chr2	-	1254	4	FSM	ENSG00000144401.14	ENST00000442521.1	1003	4	-114	-137	-113	0	multi-exon	FALSE	canonical	3	34	junction_3	264.126653120977	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGCAATTAACATTAAAG	NA	False	NA	-48	True	NA	NA	NA	207626041	207612842	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_207613444_207621805_207621918_207624228_207624405_207625676
H1_mix_00052214	chr2	-	564	1	FSM	ENSG00000272851.1	ENST00000609146.1	564	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1718	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCCATTCTTTCCTGTGG	NA	False	NA	-2	True	ATTAAA	-33	NA	207754435	207753871	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_207753900_207754400
H1_mix_00052216	chr2	-	7792	2	FSM	ENSG00000163251.4	ENST00000295417.4	7039	2	0	-753	0	753	multi-exon	FALSE	canonical	3	531	junction_1	0	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTCAAGGTGAACACTAG	-5	True	NA	NA	False	CATAAA	-38	NA	207769906	207761844	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_207768995_207769264
H1_mix_00052217	chr2	-	9777	8	FSM	ENSG00000178385.15	ENST00000427836.8	9774	8	0	-3	0	3	multi-exon	FALSE	canonical	3	6	junction_1	4.1206300291017	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTTCTCATAACAACTTG	2	True	NA	-11	True	AATAAA	-18	NA	208025527	207821284	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_207828497_207861104_207861263_207908513_207908578_207930925_207931120_207946366_207946513_207976650_207977587_208001029_208001958_208025388
H1_mix_00052221	chr2	-	2440	10	FSM	ENSG00000138413.14	ENST00000415913.5	2441	10	1	0	1	0	multi-exon	FALSE	canonical	3	53	junction_9	1681.74380397914	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTTGATTTTAATTAAAAT	791	False	NA	-41	True	ATTAAA	-23	NA	208254321	208236264	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_208237170_208239070_208239234_208239862_208240004_208241993_208242146_208243426_208243605_208245318_208245425_208248368_208248661_208251429_208251568_208253885_208253960_208254030
H1_mix_00052222	chr2	-	1044	3	FSM	ENSG00000138413.14	ENST00000484575.1	1044	3	0	0	0	0	multi-exon	FALSE	canonical	3	4400	junction_2	85	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGTATTGCTCCCTAAAA	NA	False	NA	NA	False	TATAAA	-40	NA	208240315	208236741	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_208237170_208239070_208239234_208239862
H1_mix_00052224	chr2	-	1614	4	FSM	ENSG00000138413.14	ENST00000462386.5	1614	4	0	0	0	0	multi-exon	FALSE	canonical	3	5024	junction_3	331.365189615459	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATTGCTTCTTTACTT	12	True	NA	NA	False	ACTAAA	-23	NA	208255061	208247381	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_208248661_208251429_208251568_208253885_208253960_208254938
H1_mix_00052228	chr2	-	402	2	Antisense	novelGene_ENSG00000289113.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	229	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACAATATCCTCCTCCC	NA	False	NA	NA	False	NA	NA	NA	209304895	209299319	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_-_209299358_209304531
H1_mix_00052229	chr2	-	4782	15	FSM	ENSG00000144445.17	ENST00000281772.14	4782	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	10.321613938029	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTGTTGCTTGTTATTAA	-1	True	NA	-2	True	ATTAAA	-16	NA	210171409	210021420	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_210023180_210024032_210024202_210025103_210025217_210027295_210027351_210028844_210028970_210029802_210029919_210031420_210031547_210040419_210040528_210043938_210044105_210075551_210075757_210098085_210098208_210104103_210104302_210129030_210129173_210153494_210154612_210171148
H1_mix_00052230	chr2	-	2345	8	FSM	ENSG00000144445.17	ENST00000452086.5	2334	8	0	-11	0	11	multi-exon	FALSE	canonical	0	0	junction_7	12.5795428358579	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTAATTTTTAATACTCAC	81	False	NA	NA	False	AATAAA	-26	NA	210171327	210040311	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_210040528_210043938_210044105_210075551_210075757_210098085_210098208_210104103_210104302_210129030_210129173_210153494_210154612_210171148
H1_mix_00052232	chr2	-	4591	10	FSM	ENSG00000115365.12	ENST00000450366.7	4592	10	0	1	0	-1	multi-exon	FALSE	canonical	3	265	junction_9	40.0844786931147	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCATCATGTGCTTTTTG	-28	True	NA	-9	True	AATAAA	-17	NA	210476759	210431251	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_210434564_210435386_210435460_210436215_210436393_210437689_210437873_210440597_210440745_210441307_210441444_210455106_210455315_210471958_210472077_210476315_210476413_210476619
H1_mix_00052233	chr2	-	4784	9	FSM	ENSG00000115365.12	ENST00000443314.5	4781	9	0	-3	0	3	multi-exon	FALSE	canonical	3	346	junction_5	22.0794021658196	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTGCTTTTTGTTTGCT	-8	True	NA	-3	True	AATAAA	-23	NA	210476739	210431245	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_210434564_210435386_210435460_210436215_210436393_210437689_210437873_210440597_210440745_210441307_210441444_210455106_210455315_210471958_210472077_210476315
H1_mix_00052234	chr2	-	4650	10	NIC	ENSG00000115365.12	novel	4503	10	NA	NA	68	61	combination_of_known_junctions	FALSE	canonical	3	41	junction_9	106.702077455565	3597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTGCGGGATCTGGCCA	2	True	NA	55	True	TTTAAA	-29	NA	210477584	210431187	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_210434564_210435386_210435460_210436215_210436393_210437689_210437873_210440597_210440745_210441307_210441444_210455106_210455315_210471958_210472077_210476315_210476413_210477449
H1_mix_00052235	chr2	-	4533	10	FSM	ENSG00000115365.12	ENST00000431941.6	1270	10	36	-3299	0	61	multi-exon	FALSE	canonical	3	53	junction_9	103.005932946711	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTGCGGGATCTGGCCA	-8	True	NA	55	True	TTTAAA	-29	NA	210476739	210431187	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_210434564_210435386_210435460_210436215_210436393_210437689_210437873_210440597_210440745_210441307_210441444_210455106_210455315_210471958_210472077_210476315_210476413_210476721
H1_mix_00052238	chr2	-	9595	9	NNC	ENSG00000178568.15	novel	11699	26	NA	NA	73361	28	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_2	55.1507876190359	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGCCAACTAGCAGAGAG	13	False	NA	NA	False	AATAAA	-45	NA	211591993	211375688	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_211384061_211386852_211387151_211420440_211420612_211422006_211422105_211424154_211424302_211428407_211428484_211430944_211431101_211561902_211562089_211591902
H1_mix_00052240	chr2	-	1935	2	NNC	ENSG00000178568.15	novel	2680	20	NA	NA	73344	1500	at_least_one_novel_splicesite	FALSE	canonical	3	250	junction_1	0	497	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGCTTCAAATTTGTTAG	NA	False	NA	NA	False	AAAAAG	-1	NA	211592010	211560261	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_211562089_211591902
H1_mix_00052241	chr2	-	5490	11	FSM	ENSG00000138376.11	ENST00000260947.9	5478	11	0	-12	0	12	multi-exon	TRUE	canonical	3	94	junction_8	20.4550727204769	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTAATTTTTTTTTTTT	0	True	NA	1	True	AATAAA	-30	NA	214809683	214725633	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_214729009_214730410_214730509_214745066_214745160_214745721_214745855_214752446_214752556_214767481_214767655_214769231_214769313_214780559_214781510_214792296_214792446_214797060_214797118_214809411
H1_mix_00052245	chr2	-	8722	47	FSM	ENSG00000115414.21	ENST00000323926.10	8708	47	0	-14	0	0	multi-exon	FALSE	canonical	3	2082	junction_31	393.568880388917	1465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATGGAGGAGTTTTATC	0	True	NA	-3	True	AATAAA	-34	NA	215436068	215360439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_215361627_215361968_215362080_215364878_215364986_215365504_215365631_215367862_215368028_215370293_215370433_215371908_215372016_215372108_215372376_215373321_215373412_215375213_215375394_215375628_215375719_215376497_215376675_215378174_215378263_215379129_215379318_215380810_215381081_215382211_215382326_215383327_215383484_215384019_215384185_215384859_215384977_215386688_215386959_215388211_215388302_215391631_215391815_215392930_215393204_215394527_215394720_215397136_215397224_215397679_215397849_215399256_215399352_215404388_215404656_215406237_215406511_215407126_215407322_215408107_215408198_215408297_215408427_215409562_215409740_215409933_215410115_215414836_215414959_215419241_215419386_215420672_215420802_215422090_215422244_215423349_215423527_215424145_215424326_215425093_215425286_215428179_215428339_215430714_215430853_215431832_215431965_215433323_215433462_215434695_215434825_215435654
H1_mix_00052247	chr2	-	7952	46	FSM	ENSG00000115414.21	ENST00000446046.5	7952	46	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_22	656.805014191173	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAAGTTCATCTATTTGA	0	True	NA	-14	True	AATAAA	-18	NA	215436068	215360861	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_215361627_215361968_215362080_215364878_215364986_215365504_215365631_215367862_215368028_215370293_215370433_215371908_215372016_215372108_215372301_215373321_215373412_215375213_215375394_215375628_215375719_215376497_215376675_215378174_215378263_215379129_215379318_215380810_215381081_215382211_215382326_215383327_215383484_215384019_215384185_215384859_215384977_215386688_215386959_215388211_215388302_215391631_215391815_215394527_215394720_215397136_215397224_215397679_215397849_215399256_215399352_215404388_215404656_215406237_215406511_215407126_215407322_215408107_215408198_215408297_215408427_215409562_215409740_215409933_215410115_215414836_215414959_215419241_215419386_215420672_215420802_215422090_215422244_215423349_215423527_215424145_215424326_215425093_215425286_215428179_215428339_215430714_215430853_215431832_215431965_215433323_215433462_215434695_215434825_215435654
H1_mix_00052248	chr2	-	7762	45	FSM	ENSG00000115414.21	ENST00000443816.5	7762	45	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_21	678.388309412174	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAAGTTCATCTATTTGA	-5	True	NA	-14	True	AATAAA	-18	NA	215436073	215360861	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_215361627_215361968_215362080_215364878_215364986_215365504_215365631_215367862_215368028_215370293_215370433_215371908_215372016_215372108_215372376_215373321_215373412_215375213_215375394_215375628_215375719_215376497_215376675_215378174_215378263_215379129_215379318_215382211_215382326_215383327_215383484_215384019_215384185_215384859_215384977_215386688_215386959_215388211_215388302_215391631_215391815_215394527_215394720_215397136_215397224_215397679_215397849_215399256_215399352_215404388_215404656_215406237_215406511_215407126_215407322_215408107_215408198_215408297_215408427_215409562_215409740_215409933_215410115_215414836_215414959_215419241_215419386_215420672_215420802_215422090_215422244_215423349_215423527_215424145_215424326_215425093_215425286_215428179_215428339_215430714_215430853_215431832_215431965_215433323_215433462_215434695_215434825_215435654
H1_mix_00052249	chr2	-	2430	2	FSM	ENSG00000115414.21	ENST00000498719.1	2433	2	4	-1	4	0	multi-exon	FALSE	canonical	3	3812	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTTGAAGTTCATCTATT	9746	False	NA	-17	True	AATAAA	-15	NA	215363636	215360864	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_215361627_215361968
H1_mix_00052250	chr2	-	8390	46	FSM	ENSG00000115414.21	ENST00000354785.11	8390	46	0	0	0	0	multi-exon	FALSE	canonical	3	2082	junction_30	388.542764063588	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTTGAAGTTCATCTATT	0	True	NA	-17	True	AATAAA	-15	NA	215436068	215360864	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_215361627_215361968_215362080_215364878_215364986_215365504_215365631_215367862_215368028_215370293_215370433_215371908_215372376_215373321_215373412_215375213_215375394_215375628_215375719_215376497_215376675_215378174_215378263_215379129_215379318_215380810_215381081_215382211_215382326_215383327_215383484_215384019_215384185_215384859_215384977_215386688_215386959_215388211_215388302_215391631_215391815_215392930_215393204_215394527_215394720_215397136_215397224_215397679_215397849_215399256_215399352_215404388_215404656_215406237_215406511_215407126_215407322_215408107_215408198_215408297_215408427_215409562_215409740_215409933_215410115_215414836_215414959_215419241_215419386_215420672_215420802_215422090_215422244_215423349_215423527_215424145_215424326_215425093_215425286_215428179_215428339_215430714_215430853_215431832_215431965_215433323_215433462_215434695_215434825_215435654
H1_mix_00052254	chr2	-	3996	2	Intergenic	novelGene_759	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGTAAGATTTATTTCAT	NA	False	NA	NA	False	NA	NA	NA	215926338	215922302	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_-_215923430_215923469
H1_mix_00052255	chr2	-	1477	2	Intergenic	novelGene_760	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	87	junction_1	0	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGTAAGATTTATTTCAT	NA	False	NA	NA	False	NA	NA	NA	215929150	215922302	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_-_215922547_215927917
H1_mix_00052256	chr2	-	3148	5	FSM	ENSG00000118242.16	ENST00000263268.11	3148	5	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_2	6.49519052838329	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGATGTGTGTTATATTT	-10	True	NA	1	True	ATTAAA	-23	NA	216013551	215942583	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_215944998_215945570_215945735_215947022_215947114_215996305_215996466_216013232
H1_mix_00052258	chr2	-	1867	8	FSM	ENSG00000115425.14	ENST00000265322.8	1867	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	32.0707126868877	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGCAGTGCCTGATTT	-8	True	NA	-6	True	TATAAA	-37	NA	216081809	216038387	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_216039361_216043903_216044016_216049262_216049374_216051448_216051546_216058894_216058977_216065311_216065478_216066384_216066519_216081617
H1_mix_00052260	chr2	-	4894	4	FSM	ENSG00000144583.5	ENST00000273067.5	4903	4	8	1	8	-1	multi-exon	TRUE	canonical	3	11	junction_2	5.24933858267454	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGTGTCCCTTTCCATAT	13	True	NA	0	True	AATAAA	-16	NA	216372475	216257865	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_216259680_216277671_216277865_216283573_216283730_216369744
H1_mix_00052262	chr2	-	6239	4	FSM	ENSG00000115461.5	ENST00000233813.5	6239	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	1.88561808316413	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCGTCGGCTTCCTCCG	-2	True	NA	-1	True	AATAAA	-17	NA	216695549	216672104	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_216676883_216678111_216678232_216678849_216679080_216694438
H1_mix_00052264	chr2	-	2271	8	FSM	ENSG00000127837.10	ENST00000475678.5	2270	8	0	-1	0	0	multi-exon	FALSE	canonical	3	1154	junction_7	53.3918896233409	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGAGTCTGTGTGGATTT	9246	False	NA	-6	True	AATAAA	-15	NA	218270088	218264128	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_218264609_218265019_218265175_218265370_218265462_218265578_218266588_218266846_218266987_218267493_218267614_218269381_218269535_218269965
H1_mix_00052265	chr2	-	1760	11	FSM	ENSG00000127837.10	ENST00000248450.9	1760	11	0	0	0	0	multi-exon	FALSE	canonical	3	1154	junction_10	44.7393562761021	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGAGTCTGTGTGGATTT	0	True	NA	-6	True	AATAAA	-15	NA	218270137	218264128	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_218264609_218265019_218265175_218265370_218265462_218265578_218265683_218265830_218265947_218266063_218266148_218266442_218266588_218266846_218266987_218267493_218267614_218269381_218269535_218269965
H1_mix_00052266	chr2	-	1804	11	FSM	ENSG00000127837.10	ENST00000444053.5	1804	11	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_10	336.908429695667	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGAGTCTGTGTGGATTT	9156	False	NA	-6	True	AATAAA	-15	NA	218270178	218264128	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_218264609_218265019_218265175_218265370_218265462_218265578_218265683_218265830_218265947_218266063_218266148_218266442_218266588_218266846_218266987_218267493_218267614_218269381_218269538_218269965
H1_mix_00052267	chr2	-	2429	12	FSM	ENSG00000135926.15	ENST00000396809.6	2422	12	0	-7	0	3	multi-exon	FALSE	canonical	3	20	junction_11	58.4341120797215	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGGCTCCAGGAGTATG	6608	False	NA	-2	True	AATAAA	-25	NA	218285934	218274193	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_218275622_218276025_218276080_218277003_218277100_218277365_218277454_218277632_218277671_218277934_218277975_218278514_218278566_218279037_218279092_218279288_218279354_218280025_218280127_218281939_218282182_218285762
H1_mix_00052268	chr2	-	2295	12	FSM	ENSG00000135926.15	ENST00000258412.8	2292	12	0	-3	0	3	multi-exon	FALSE	canonical	0	0	junction_11	63.5635947576315	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGGCTCCAGGAGTATG	6	True	NA	-2	True	AATAAA	-25	NA	218292503	218274193	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_218275622_218276025_218276080_218277003_218277100_218277365_218277454_218277632_218277671_218277934_218277975_218278514_218278566_218279037_218279092_218279288_218279354_218280025_218280127_218281939_218282182_218292465
H1_mix_00052269	chr2	-	592	6	FSM	ENSG00000135926.15	ENST00000495113.5	596	6	0	4	0	-4	multi-exon	FALSE	canonical	0	0	junction_5	82.5508328243877	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACAGGGATTGGGATGGG	-3	True	NA	NA	False	NA	NA	NA	218292512	218278482	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_218278566_218279037_218279092_218279288_218279354_218280025_218280127_218281939_218282182_218292465
H1_mix_00052271	chr2	-	530	2	FSM	ENSG00000225062.1	ENST00000425481.1	529	2	0	-1	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCCTGTGGTGTTTTGT	3314	False	NA	-3	True	AATATA	-16	NA	218367322	218366664	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_218366799_218366926
H1_mix_00052272	chr2	-	448	3	FSM	ENSG00000225062.1	ENST00000441749.1	480	3	32	0	32	0	multi-exon	FALSE	canonical	1	3	junction_2	2	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCCTGTGGTGTTTTGT	0	True	NA	-3	True	AATATA	-16	NA	218367803	218366664	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_218366799_218366926_218367028_218367590
H1_mix_00052273	chr2	-	8022	26	FSM	ENSG00000135913.11	ENST00000258399.8	8022	26	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_14	13.1054797699283	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTTGACTGTTATTTC	-16	True	NA	-4	True	ATTAAA	-17	NA	218568351	218450250	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_218455018_218455579_218455719_218457091_218457162_218459789_218459906_218463305_218463367_218466009_218466177_218474629_218474886_218476839_218476982_218479649_218479716_218482069_218482235_218485663_218485744_218488303_218488422_218495759_218495951_218497733_218497858_218498025_218498158_218509978_218510141_218529955_218530041_218534608_218534707_218546220_218546299_218546918_218547092_218549808_218549910_218553552_218553725_218558497_218558678_218560819_218560884_218562672_218562814_218568177
H1_mix_00052274	chr2	-	2271	11	NNC	ENSG00000135913.11	novel	8022	26	NA	NA	0	2575	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	16.0252925090308	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATTTATATTGTAAAA	10	True	NA	NA	False	AATAAA	-8	NA	218568325	218525695	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_218526727_218529955_218530041_218534608_218534707_218546220_218546299_218546918_218547092_218549808_218549910_218553552_218553725_218558497_218558678_218560819_218560884_218562672_218562814_218568177
H1_mix_00052275	chr2	-	11291	11	FSM	ENSG00000115568.16	ENST00000411696.7	11290	11	0	-1	0	1	multi-exon	FALSE	canonical	2	7	junction_7	16.3389106124001	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGGCTTGTGTTTGCTC	1	True	NA	-3	True	AATAAA	-36	NA	218659623	218633327	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_218638809_218640663_218640770_218642027_218645065_218646170_218646349_218648634_218649460_218650358_218650527_218651700_218652301_218656149_218656464_218658700_218658877_218658979_218659131_218659368
H1_mix_00052276	chr2	-	10496	10	FSM	ENSG00000115568.16	ENST00000449707.5	5909	10	0	-4587	0	0	multi-exon	FALSE	canonical	3	7	junction_9	16.5260736749874	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGGCTTGTGTTTGCT	3	True	NA	-4	True	AATAAA	-35	NA	218659524	218633328	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_218638809_218640663_218640770_218642027_218645065_218646170_218646349_218648634_218649460_218650358_218650527_218656149_218656464_218658700_218658877_218658979_218659036_218659368
H1_mix_00052280	chr2	-	1828	8	FSM	ENSG00000163481.8	ENST00000473034.5	1807	8	0	-21	0	21	multi-exon	FALSE	canonical	3	230	junction_3	19.3147928927492	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCCTAGCCTGTGAGGAAT	12	True	NA	-14	True	AATAAA	-36	NA	218671977	218663870	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_218664536_218664738_218664874_218665154_218665248_218665915_218666060_218666158_218666231_218667911_218667982_218668078_218668680_218671929
H1_mix_00052283	chr2	-	266	2	ISM	ENSG00000181378.14	ENST00000453220.5	5877	33	35826	6	16473	-6	3prime_fragment	FALSE	canonical	3	23	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTATCTACCTTGACTT	134	False	NA	-9	True	AGTAAA	-16	NA	219003231	219002852	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_219003022_219003134
H1_mix_00052284	chr2	-	2045	9	NNC	ENSG00000187736.13	novel	2113	9	NA	NA	0	53067	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	45.394795957246	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGGAGACTGGACCAGGG	9272	False	NA	NA	False	NA	NA	NA	219160762	219016289	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_219016315_219075303_219076456_219077245_219077365_219078088_219078207_219146679_219146739_219147656_219147796_219157471_219157685_219158185_219158363_219160719
H1_mix_00052285	chr2	-	2473	3	FSM	ENSG00000163501.7	ENST00000295731.7	2473	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	2	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACAGAGTCCAGGATGCT	0	True	NA	-3	True	AATAAA	-20	NA	219060921	219054423	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219055866_219057432_219057695_219060152
H1_mix_00052289	chr2	-	2217	8	FSM	ENSG00000115649.16	ENST00000360507.10	2019	8	0	-198	0	198	multi-exon	FALSE	canonical	3	333	junction_7	22.8901547324056	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCAACTTGGGATGCCAT	15	True	NA	NA	False	NA	NA	NA	219176925	219171698	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219173129_219173349_219173468_219174145_219174208_219174777_219174907_219174987_219175109_219175590_219175673_219176222_219176332_219176759
H1_mix_00052290	chr2	-	2431	9	FSM	ENSG00000115649.16	ENST00000453038.5	1154	9	-230	-1047	-230	50	multi-exon	FALSE	canonical	3	21	junction_8	116.600546739713	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGCCTTCCAAGCCTCC	596	False	NA	45	True	NA	NA	NA	219177543	219171846	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219173129_219173349_219173468_219174145_219174208_219174777_219174907_219174987_219175109_219175590_219175673_219176222_219176332_219176759_219176848_219177103
H1_mix_00052291	chr2	-	919	7	FSM	ENSG00000115649.16	ENST00000451647.1	919	7	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_6	24.2807651352991	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGGCTGTCCTGCATCCC	42	True	NA	NA	False	AATACA	-8	NA	219176898	219173050	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219173129_219173349_219173468_219174145_219174208_219174777_219175109_219175590_219175673_219176222_219176332_219176759
H1_mix_00052293	chr2	-	3966	16	NNC	ENSG00000198925.12	novel	4025	16	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	140.76211611557	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGTTGTCTCGCGCGG	9449	False	NA	-3	True	AATAAA	-18	NA	219229305	219219379	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_219220453_219220746_219220893_219221079_219221303_219222049_219222168_219222271_219222451_219222644_219222894_219223584_219223765_219223868_219224023_219224105_219224855_219225070_219225213_219225410_219225573_219226868_219226935_219227768_219227814_219227921_219228054_219228433_219228486_219229009
H1_mix_00052294	chr2	-	4027	16	FSM	ENSG00000198925.12	ENST00000409618.5	4025	16	0	-2	0	0	multi-exon	FALSE	canonical	2	71	junction_15	100.684236877257	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGTTGTCTCGCGCGG	-28	True	NA	-3	True	AATAAA	-18	NA	219229368	219219379	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219220453_219220746_219220893_219221079_219221303_219222049_219222168_219222271_219222451_219222644_219222894_219223584_219223765_219223868_219224023_219224105_219224855_219225070_219225213_219225410_219225573_219226868_219226934_219227769_219227814_219227921_219228054_219228433_219228486_219229009
H1_mix_00052295	chr2	-	3890	17	NIC	ENSG00000198925.12	novel	3770	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	29	junction_15	134.000218633217	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGTTGTCTCGCGCGG	14	True	NA	-3	True	AATAAA	-18	NA	219229594	219219379	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_219220453_219220746_219220893_219221079_219221303_219222049_219222168_219222271_219222451_219222644_219222894_219223584_219223765_219223868_219224023_219224105_219224855_219225070_219225213_219225410_219225573_219226868_219226934_219227769_219227814_219227921_219228054_219228433_219228483_219229009_219229175_219229534
H1_mix_00052297	chr2	-	3895	16	FSM	ENSG00000198925.12	ENST00000361242.9	3770	16	0	-125	0	125	multi-exon	FALSE	canonical	2	187	junction_15	76.6331520948995	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCAGCTTCCGACCCACA	-28	True	NA	NA	False	NA	NA	NA	219229636	219219254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219220453_219220746_219220893_219221079_219221303_219222049_219222168_219222271_219222451_219222644_219222894_219223584_219223765_219223868_219224023_219224105_219224855_219225070_219225213_219225410_219225573_219226868_219226934_219227769_219227814_219227921_219228054_219228433_219228486_219229534
H1_mix_00052298	chr2	-	3924	15	FSM	ENSG00000198925.12	ENST00000396761.6	3799	15	0	-125	0	125	multi-exon	FALSE	canonical	2	102	junction_14	95.5612048770369	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCAGCTTCCGACCCACA	9037	False	NA	NA	False	NA	NA	NA	219229717	219219254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219220453_219220746_219220893_219221079_219221303_219222049_219222168_219222271_219222451_219222644_219222894_219223584_219223765_219223868_219224023_219224105_219224855_219225070_219225213_219225410_219225573_219226868_219226934_219227769_219227814_219227921_219228054_219229534
H1_mix_00052307	chr2	-	2597	17	FSM	ENSG00000163521.16	ENST00000295759.12	2725	17	104	24	66	-24	multi-exon	FALSE	canonical	1	2	junction_16	4.60934851687307	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGAGACAGTACCAGCTC	9396	False	NA	-26	True	ATTAAA	-3	NA	219245340	219236621	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219237348_219237511_219237728_219237825_219237958_219238249_219238364_219238494_219238585_219238704_219238780_219239091_219239211_219239410_219239452_219239560_219239683_219239774_219239834_219239919_219240095_219240190_219240286_219242513_219242575_219242767_219242919_219243147_219243315_219243501_219243644_219245228
H1_mix_00052308	chr2	-	878	4	FSM	ENSG00000127824.15	ENST00000248437.9	2049	4	2	1169	0	-107	multi-exon	FALSE	canonical	3	176	junction_3	22.0655588845805	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTCATCTCTGCAGAAAAG	1	True	NA	NA	False	NA	NA	NA	219253916	219250878	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219251324_219251564_219251714_219252007_219252231_219253855
H1_mix_00052310	chr2	-	825	3	FSM	ENSG00000127824.15	ENST00000462806.5	804	3	0	-21	0	0	multi-exon	FALSE	canonical	3	176	junction_2	27	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTCTACAGCCGTGGTC	1	True	NA	NA	False	AAGAAA	-35	NA	219253916	219251172	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219251714_219252007_219252231_219253855
H1_mix_00052312	chr2	-	3611	23	FSM	ENSG00000054356.14	ENST00000295718.7	3612	23	1	0	1	0	multi-exon	TRUE	canonical	3	8	junction_13	6.51254352311721	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGACTCCTACGCATTTC	-12	True	NA	0	True	AATAAA	-28	NA	219309400	219289622	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219290298_219290537_219290612_219290825_219290891_219291469_219291524_219294974_219295142_219296225_219296346_219296438_219296517_219296748_219296823_219296984_219297133_219297232_219297434_219297884_219298104_219299046_219299112_219299304_219299385_219299699_219299787_219299984_219300260_219300942_219300978_219301587_219301720_219302136_219302492_219302575_219302838_219303734_219303832_219307443_219307558_219307791_219307843_219309217
H1_mix_00052313	chr2	-	3833	15	FSM	ENSG00000123992.20	ENST00000273075.9	3825	15	0	-8	0	8	multi-exon	FALSE	canonical	3	602	junction_9	43.2989725098433	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTACATTTGCCTTGGTT	0	True	NA	-5	True	GATAAA	-13	NA	219387912	219372034	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219374343_219374854_219375023_219381334_219381437_219381544_219381585_219381978_219382140_219383130_219383215_219384365_219384444_219385423_219385532_219385630_219385707_219385967_219386099_219386285_219386412_219386664_219386779_219386891_219386981_219387069_219387164_219387758
H1_mix_00052314	chr2	-	2408	15	FSM	ENSG00000123992.20	ENST00000520694.6	2408	15	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_14	170.694320410517	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCAGGCATGGTGGCAC	-3	True	NA	NA	False	AATACA	-7	NA	219387796	219373526	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219374343_219374854_219375023_219381334_219381437_219381544_219381585_219381978_219382140_219383130_219383215_219384365_219384444_219385423_219385532_219385630_219385707_219385967_219386099_219386285_219386412_219386664_219386779_219386891_219386981_219387069_219387164_219387575
H1_mix_00052315	chr2	-	1659	15	FSM	ENSG00000123992.20	ENST00000373963.5	1657	15	0	-2	0	0	multi-exon	FALSE	canonical	3	87	junction_13	156.242697788552	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCGTGCTACGCTTATT	-17	True	NA	-3	True	ATTAAA	-18	NA	219387929	219374193	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219374343_219374854_219375023_219381334_219381437_219381544_219381585_219381978_219382140_219383130_219383215_219384365_219384444_219385423_219385532_219385630_219385707_219385967_219386099_219386285_219386412_219386664_219386779_219386891_219386949_219387069_219387164_219387758
H1_mix_00052321	chr2	-	3028	4	FSM	ENSG00000123989.15	ENST00000243776.11	3028	4	0	0	0	0	multi-exon	FALSE	canonical	3	581	junction_2	14.8548533034381	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGATTCAGAGGTTTTG	8942	False	219543847	-12	True	AATAAA	-16	NA	219543809	219538953	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219540643_219540945_219541126_219541615_219542190_219543224
H1_mix_00052322	chr2	-	1079	2	FSM	ENSG00000123989.15	ENST00000373891.3	1044	2	-35	0	22	0	multi-exon	FALSE	canonical	3	612	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTATCTTCCTTTGTG	5	True	NA	-11	True	AGTAAA	-18	NA	219543573	219541459	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219542190_219543224
H1_mix_00052323	chr2	-	663	3	FSM	ENSG00000124006.15	ENST00000462534.5	662	3	0	-1	0	0	multi-exon	FALSE	canonical	3	89	junction_1	4	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGCCTCTCTGAGTG	5	True	NA	-3	True	AATAAA	-15	NA	219552389	219550727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219550843_219551528_219551799_219552111
H1_mix_00052324	chr2	-	695	4	FSM	ENSG00000124006.15	ENST00000489804.5	694	4	0	-1	0	0	multi-exon	FALSE	canonical	2	4	junction_1	38.6637929966641	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGCCTCTCTGAGTG	-4	True	NA	-3	True	AATAAA	-15	NA	219552714	219550727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219550869_219551528_219551799_219552111_219552217_219552535
H1_mix_00052326	chr2	-	908	1	FSM	ENSG00000124006.15	ENST00000596474.1	544	1	-393	29	-393	-29	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCCAACCACTGACTCTG	NA	False	NA	NA	False	NA	NA	NA	219555165	219554257	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219554300_219555200
H1_mix_00052329	chr2	-	3311	9	FSM	ENSG00000124006.15	ENST00000373873.8	3297	9	0	-14	0	14	multi-exon	FALSE	canonical	3	245	junction_1	44.0794736810684	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAAGTACTGTGAGGGCCA	783	False	NA	-3	True	AATAAA	-31	NA	219571289	219561707	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219562009_219562401_219562675_219563354_219563628_219565241_219565515_219566829_219567127_219567272_219567576_219567717_219567970_219568054_219568325_219570220
H1_mix_00052331	chr2	-	6712	17	FSM	ENSG00000116120.11	ENST00000281828.8	6761	17	0	49	0	-49	multi-exon	FALSE	canonical	3	709	junction_12	89.4733724356023	165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTAGCCTCCAGAACTG	-9	True	NA	NA	False	AATGAA	-29	NA	222656092	222566947	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_222572023_222599927_222600084_222613810_222613929_222619644_222619738_222623649_222623731_222624271_222624480_222624713_222624776_222628836_222628889_222630112_222630175_222631603_222631675_222633198_222633308_222634390_222634542_222639579_222639696_222640861_222640932_222642850_222643006_222648739_222648796_222656015
H1_mix_00052332	chr2	-	555	1	FSM	ENSG00000203531.3	ENST00000444764.1	862	1	96	211	96	-211	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGAAGGACGGAACTCCTT	NA	False	NA	NA	False	NA	NA	NA	222699388	222698833	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_222698800_222699400
H1_mix_00052333	chr2	-	3987	5	FSM	ENSG00000152056.17	ENST00000396654.7	3986	5	0	-1	0	1	multi-exon	FALSE	canonical	3	28	junction_3	2.34520787991171	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGTGTTTTCATGAATA	-1	True	NA	3	True	AATAAA	-28	NA	223837582	223755324	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_223758751_223765212_223765351_223775900_223776010_223777690_223777870_223837447
H1_mix_00052335	chr2	-	864	5	FSM	ENSG00000085449.15	ENST00000483061.1	864	5	0	0	0	0	multi-exon	FALSE	canonical	3	627	junction_2	60.1638388070442	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATGCAAACCCTTCCTC	-2	True	NA	NA	False	NA	NA	NA	223945335	223900854	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_223901334_223905946_223906002_223912252_223912327_223917942_223918011_223945147
H1_mix_00052336	chr2	-	2217	9	FSM	ENSG00000135919.14	ENST00000409304.6	2226	9	0	9	0	-9	multi-exon	FALSE	canonical	3	376	junction_3	79.6884558766199	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCAAAGCTCGGAGACT	-1	True	NA	-15	True	AATAAA	-25	NA	224039286	223975053	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_223975905_223977543_223977628_223980310_223980398_223982680_223982782_223984751_223984951_223991802_223992001_223998114_223998343_224001641_224001923_224039098
H1_mix_00052337	chr2	-	2220	9	FSM	ENSG00000135919.14	ENST00000258405.9	2229	9	0	9	0	-9	multi-exon	FALSE	canonical	3	60	junction_3	177.682300750525	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCAAAGCTCGGAGACT	-1	True	NA	-15	True	AATAAA	-25	NA	224039286	223975053	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_223975905_223977543_223977628_223980310_223980401_223982680_223982782_223984751_223984951_223991802_223992001_223998114_223998343_224001641_224001923_224039098
H1_mix_00052338	chr2	-	5989	2	FSM	ENSG00000135919.14	ENST00000473202.1	5989	2	0	0	0	0	multi-exon	FALSE	canonical	3	652	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTTCTCTGCTATTTGA	9219	False	NA	41	True	AATAAA	-24	NA	223982780	223975152	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_223975905_223977543
H1_mix_00052340	chr2	-	6771	16	FSM	ENSG00000036257.14	ENST00000264414.9	6756	16	0	-15	0	15	multi-exon	TRUE	canonical	3	522	junction_15	70.708038204059	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTCTTGAATAAATGCCT	4	True	NA	NA	False	ATTAAA	-32	NA	224585363	224470134	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_224474377_224478199_224478346_224481891_224482079_224495831_224495967_224497752_224497850_224500362_224500488_224502964_224503073_224503651_224503823_224505955_224506133_224506857_224507004_224511353_224511583_224513523_224513639_224514611_224514773_224535527_224535642_224557658_224557857_224584943
H1_mix_00052341	chr2	-	6607	15	FSM	ENSG00000036257.14	ENST00000344951.8	6592	15	0	-15	0	15	multi-exon	FALSE	canonical	3	66	junction_14	172.846221614852	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTCTTGAATAAATGCCT	14	True	NA	NA	False	ATTAAA	-32	NA	224585397	224470134	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_224474377_224478199_224478346_224481891_224482079_224495831_224495967_224497752_224497850_224500362_224500488_224502964_224503073_224503651_224503823_224505955_224506133_224506857_224507004_224511353_224511583_224513523_224513639_224514611_224514773_224535527_224535642_224584943
H1_mix_00052342	chr2	-	2394	2	FSM	ENSG00000036257.14	ENST00000497715.1	2400	2	6	0	6	0	multi-exon	FALSE	canonical	3	738	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCTTCAGTGTTGATGTA	NA	False	NA	-19	True	AATAAA	-22	NA	224480118	224473901	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_224474377_224478199
H1_mix_00052344	chr2	-	10495	2	FSM	ENSG00000169047.6	ENST00000305123.6	9771	2	-723	-1	-723	1	multi-exon	FALSE	canonical	3	63	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTAAGAGCAGTGTATGC	603	False	NA	-7	True	ATTAAA	-20	NA	226800543	226731310	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_226736251_226794988
H1_mix_00052345	chr2	-	5156	6	FSM	ENSG00000135917.16	ENST00000644224.2	5213	6	12	45	-6	-45	multi-exon	FALSE	canonical	3	6	junction_3	5.46260011349906	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACCAACAATCAAACAAATA	-1	True	NA	-46	True	NA	NA	NA	227718016	227683807	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_227687574_227688165_227688308_227695888_227696082_227698735_227699565_227702168_227702321_227717942
H1_mix_00052347	chr2	-	3257	13	FSM	ENSG00000187957.8	ENST00000341772.5	3257	13	0	0	0	0	multi-exon	FALSE	canonical	2	53	junction_3	9.3407708461347	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGTTGTCTCTTTTGTTC	-28	True	NA	-3	True	AATAAA	-18	NA	229714555	229357628	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_229358652_229366872_229367120_229388264_229388397_229407231_229407346_229418107_229418231_229447315_229447541_229477139_229477254_229512782_229512937_229546946_229547093_229585857_229586025_229588393_229588489_229591579_229591889_229714147
H1_mix_00052348	chr2	-	10102	42	FSM	ENSG00000153827.14	ENST00000675903.1	10100	42	0	-2	0	2	multi-exon	TRUE	canonical	3	86	junction_40	68.3967760702178	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTCAGTTTTATTAAATTA	-7	True	NA	-4	True	AATAAA	-16	NA	229922009	229763834	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_229767751_229768615_229768720_229769230_229769326_229771518_229771633_229774096_229774262_229777314_229777480_229778432_229778588_229778875_229778991_229785756_229785856_229787504_229787662_229788797_229788941_229789610_229789763_229791123_229791252_229791865_229792066_229792152_229792227_229792972_229793146_229795178_229795331_229796590_229796783_229797689_229797832_229798874_229799050_229799282_229799384_229802251_229802460_229803570_229803690_229803998_229804228_229805729_229805884_229807707_229807865_229808251_229808370_229810879_229811046_229811135_229811205_229813869_229814032_229814232_229814326_229815098_229815195_229815272_229815309_229818363_229818513_229829192_229829289_229830755_229830840_229836847_229836985_229840821_229840928_229858771_229859575_229860405_229860532_229879981_229880129_229921879
H1_mix_00052349	chr2	-	10105	42	FSM	ENSG00000153827.14	ENST00000675453.1	10103	42	0	-2	0	2	multi-exon	FALSE	canonical	3	33	junction_25	74.9256145099699	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTCAGTTTTATTAAATTA	-7	True	NA	-4	True	AATAAA	-16	NA	229922009	229763834	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_229767751_229768615_229768720_229769230_229769326_229771518_229771633_229774096_229774262_229777314_229777480_229778432_229778588_229778875_229778991_229785756_229785856_229787504_229787662_229788797_229788941_229789610_229789763_229791123_229791252_229791865_229792066_229792152_229792227_229792972_229793146_229795178_229795331_229796590_229796783_229797689_229797832_229798874_229799050_229799282_229799384_229802251_229802460_229803570_229803690_229803998_229804228_229805729_229805884_229807704_229807865_229808251_229808370_229810879_229811046_229811135_229811205_229813869_229814032_229814232_229814326_229815098_229815195_229815272_229815309_229818363_229818513_229829192_229829289_229830755_229830840_229836847_229836985_229840821_229840928_229858771_229859575_229860405_229860532_229879981_229880129_229921879
H1_mix_00052351	chr2	-	10190	42	NIC	ENSG00000153827.14	novel	10103	42	NA	NA	-118	0	intron_retention	FALSE	canonical	3	13	junction_41	82.3350982975045	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGTCAGTTTTATTAAAT	-16	True	NA	-6	True	AATAAA	-14	NA	229921780	229763836	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_229767751_229768615_229768720_229769230_229769326_229771518_229771633_229774096_229774262_229777314_229777480_229778432_229778588_229778875_229778991_229785756_229785856_229787504_229787662_229788797_229788941_229789610_229789763_229791123_229791252_229791865_229792066_229792152_229792227_229792972_229793146_229795178_229795331_229796590_229796783_229797689_229797832_229798874_229799050_229799282_229799384_229802251_229802460_229803570_229803690_229803998_229804228_229805729_229805884_229807704_229807865_229808251_229808370_229810879_229811046_229811135_229811205_229813869_229814032_229814232_229814326_229815098_229815195_229815272_229815309_229818363_229818513_229829192_229829289_229830755_229830840_229836847_229836985_229840821_229840928_229858771_229859575_229860405_229860532_229879981_229880129_229921563
H1_mix_00052352	chr2	-	9892	41	NNC	ENSG00000153827.14	novel	10103	42	NA	NA	13	0	intron_retention	FALSE	canonical	3	33	junction_25	76.7670135865659	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGTCAGTTTTATTAAAT	-8	True	NA	-6	True	AATAAA	-14	NA	229921939	229763836	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_229767751_229768615_229768720_229769230_229769326_229771518_229771633_229774096_229774262_229777314_229777480_229778432_229778588_229778875_229778991_229785756_229785856_229787504_229787662_229788797_229788941_229789610_229789763_229791123_229791252_229791865_229792066_229792152_229792227_229792972_229793131_229795178_229795331_229796590_229796783_229797689_229797832_229798874_229799050_229799282_229799384_229802251_229802460_229803570_229803690_229803998_229804228_229805729_229805884_229807704_229807865_229808251_229808370_229810879_229811046_229811135_229811205_229813869_229814032_229814232_229814326_229815098_229815195_229815272_229815309_229818363_229818513_229829192_229829289_229830755_229830840_229836847_229836985_229840821_229840928_229858771_229859575_229879981_229880129_229921879
H1_mix_00052353	chr2	-	9763	42	NIC	ENSG00000153827.14	novel	10100	42	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_39	77.4045362034174	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGTCAGTTTTATTAAAT	36	True	NA	-6	True	AATAAA	-14	NA	229921966	229763836	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_229767751_229768615_229768720_229769230_229769326_229771518_229771633_229774096_229774262_229777314_229777480_229778432_229778588_229778875_229778991_229785756_229785856_229787504_229787662_229788797_229788941_229789610_229789763_229791123_229791252_229791865_229792066_229792152_229792227_229792972_229793146_229795178_229795331_229796590_229796783_229797689_229797832_229798874_229799050_229799282_229799384_229802251_229802460_229803570_229803690_229803998_229804228_229805729_229805803_229807707_229807865_229808251_229808370_229810879_229811046_229811135_229811205_229813869_229814032_229814232_229814326_229815098_229815195_229815272_229815309_229818363_229818513_229829192_229829289_229830755_229830840_229836847_229836985_229840821_229840928_229858771_229858832_229858918_229859575_229879981_229880129_229921879
H1_mix_00052354	chr2	-	9990	42	NIC	ENSG00000153827.14	novel	10103	42	NA	NA	17	0	intron_retention	FALSE	canonical	3	7	junction_25	76.8564644083784	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGTCAGTTTTATTAAAT	25	True	NA	-6	True	AATAAA	-14	NA	229921977	229763836	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_229767751_229768615_229768720_229769230_229769326_229771518_229771633_229774096_229774262_229777314_229777480_229778432_229778588_229778875_229778991_229785756_229785856_229787504_229787662_229788797_229788941_229789610_229789763_229791123_229791252_229791865_229792066_229792152_229792227_229792972_229793146_229795178_229795331_229796590_229796783_229797689_229797832_229798874_229799050_229799282_229799384_229802251_229802460_229803570_229803690_229803998_229804228_229805729_229805803_229807704_229807865_229808251_229808370_229810879_229811046_229811135_229811205_229813869_229814032_229814232_229814326_229815098_229815195_229815272_229815309_229818363_229818513_229829192_229829289_229830755_229830840_229836847_229836985_229840821_229840928_229858771_229859575_229860405_229860532_229879981_229880129_229921879
H1_mix_00052355	chr2	-	9866	41	NIC	ENSG00000153827.14	novel	10100	42	NA	NA	12	0	intron_retention	FALSE	canonical	3	45	junction_25	69.1287024324918	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGTCAGTTTTATTAAAT	20	True	NA	-6	True	AATAAA	-14	NA	229921982	229763836	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_229767751_229768615_229768720_229769230_229769326_229771518_229771633_229774096_229774262_229777314_229777480_229778432_229778588_229778875_229778991_229785756_229785856_229787504_229787662_229788797_229788941_229789610_229789763_229791123_229791252_229791865_229792066_229792152_229792227_229792972_229793146_229795178_229795331_229796590_229796783_229797689_229797832_229798874_229799050_229799282_229799384_229802251_229802460_229803570_229803690_229803998_229804228_229805729_229805803_229807707_229807865_229808251_229808370_229810879_229811046_229811135_229811205_229813869_229814032_229814232_229814326_229815098_229815195_229815272_229815309_229818363_229818513_229829192_229829289_229830755_229830840_229836847_229836985_229840821_229840928_229858771_229859575_229879981_229880129_229921879
H1_mix_00052356	chr2	-	9965	41	NIC	ENSG00000153827.14	novel	10100	42	NA	NA	0	1	intron_retention	FALSE	canonical	3	129	junction_39	62.6242564826122	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTCAGTTTTATTAAATT	3	True	NA	-5	True	AATAAA	-15	NA	229921999	229763835	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_229767751_229768615_229768720_229769230_229769326_229771518_229771633_229774096_229774262_229777314_229777480_229778432_229778588_229778875_229778991_229785756_229785856_229787504_229787662_229788797_229788941_229789610_229789763_229791123_229791252_229791865_229792066_229792152_229792227_229792972_229793146_229795178_229795331_229796590_229796783_229797689_229797832_229798874_229799050_229799282_229799384_229802251_229802460_229803570_229803690_229803998_229804228_229805729_229805884_229807707_229807865_229808251_229808370_229810879_229811046_229811135_229811205_229813869_229814032_229814232_229814326_229815098_229815195_229815272_229815309_229818363_229818513_229829192_229829289_229830755_229830840_229836847_229836985_229840821_229840928_229858771_229859575_229879981_229880129_229921879
H1_mix_00052358	chr2	-	4318	5	FSM	ENSG00000163053.11	ENST00000295190.9	4315	5	0	-3	0	3	multi-exon	TRUE	canonical	3	13	junction_1	4.9180788932265	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCAGTGAGTTTTTGTATA	-1	True	NA	-7	True	AATAAA	-20	NA	230068924	230034978	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_230037532_230045744_230046723_230049760_230049905_230059093_230059367_230068554
H1_mix_00052361	chr2	-	261	1	FSM	ENSG00000237758.1	ENST00000412556.1	261	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTCTGGGAAGCTCTCA	34	False	NA	NA	False	NA	NA	NA	230725403	230725142	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_230725100_230725400
H1_mix_00052362	chr2	-	3946	14	FSM	ENSG00000115053.17	ENST00000322723.9	3924	14	0	-22	0	22	multi-exon	FALSE	canonical	3	3985	junction_8	471.255191612041	1102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTAGCTCTTAAATTGCA	5	True	NA	23	True	ATTAAA	-44	NA	231464484	231453508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_231455268_231455400_231455625_231456009_231456137_231456630_231456765_231457000_231457125_231457642_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231464335
H1_mix_00052363	chr2	-	2978	14	FSM	ENSG00000115053.17	ENST00000453992.6	2978	14	0	0	0	0	multi-exon	FALSE	canonical	2	50	junction_13	1348.40720852419	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCATGGTTTTTGCTTCA	3	True	NA	-77	True	AAGAAA	-16	NA	231464180	231454807	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_231455268_231455400_231455625_231456009_231456137_231456630_231456765_231457000_231457125_231457642_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231463700
H1_mix_00052364	chr2	-	2563	14	FSM	ENSG00000115053.17	ENST00000417652.6	2563	14	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_13	1330.91608349354	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCATGGTTTTTGCTTCA	-24	True	NA	-77	True	AAGAAA	-16	NA	231464207	231454807	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_231455268_231455400_231455625_231456009_231456137_231456630_231456765_231457000_231457125_231457642_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231464142
H1_mix_00052366	chr2	-	212	1	FSM	ENSG00000223198.1	ENST00000411266.1	212	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTGGGAAGCTGAGGCT	NA	False	NA	93	True	NA	NA	NA	231502201	231501989	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_231502000_231502200
H1_mix_00052367	chr2	-	1725	5	Fusion	ENSG00000181798.4_ENSG00000283491.1	novel	1334	3	NA	NA	56	-4997	multi-exon	FALSE	canonical	3	4	junction_1	7.72576857018122	5316	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAGACTCCATGGCCATG	36	False	NA	-4	True	AATAAA	-28	NA	231514329	231502086	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr2_-_231503205_231507168_231507256_231509177_231509344_231513526_231513633_231514081
H1_mix_00052368	chr2	-	1313	3	FSM	ENSG00000181798.4	ENST00000668648.2	1334	3	19	2	19	-2	multi-exon	FALSE	canonical	3	17	junction_2	4	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTGTGGCTCATACCCT	-1	True	NA	NA	False	AATAAA	-16	NA	231514366	231508421	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_231509344_231513526_231513633_231514081
H1_mix_00052369	chr2	-	2232	1	NIC	ENSG00000171596.7	novel	3221	3	NA	NA	4296	-731	mono-exon	FALSE	NA	NA	NA	NA	NA	767	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGCCAGAGGGTCTCTG	4315	False	NA	NA	False	NA	NA	NA	231526149	231523917	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_231523900_231526100
H1_mix_00052370	chr2	-	1140	5	FSM	ENSG00000156973.14	ENST00000287600.9	1140	5	19	-19	0	19	multi-exon	FALSE	canonical	3	275	junction_3	12.3970762682174	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTTTTCTGGAAAGTG	-4	True	NA	11	True	ATTAAA	-38	NA	231781263	231732413	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_231733034_231737186_231737293_231738012_231738139_231739099_231739189_231781064
H1_mix_00052372	chr2	-	969	2	FSM	ENSG00000156973.14	ENST00000477748.1	996	2	0	27	0	-27	multi-exon	FALSE	canonical	3	7	junction_1	0	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATACTGGACTATGTCTCT	1	True	NA	NA	False	NA	NA	NA	231781282	231778749	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_231779501_231781064
H1_mix_00052373	chr2	-	407	1	FSM	ENSG00000237641.1	ENST00000452854.1	407	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAAAGCTCCTGAGCACC	NA	False	NA	NA	False	NA	NA	NA	231789887	231789480	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_231789500_231789900
H1_mix_00052374	chr2	-	1044	3	FSM	ENSG00000163273.4	ENST00000409852.2	1055	3	0	11	0	-11	multi-exon	FALSE	canonical	3	8	junction_2	2.5	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTGAAAACTGTCTTTA	-1	True	NA	NA	False	AAAAAG	-13	NA	231926396	231921819	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_231922316_231925404_231925716_231926159
H1_mix_00052375	chr2	-	757	1	FSM	ENSG00000244280.1	ENST00000465689.1	757	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGTGCGCGCGTTGAGC	NA	False	NA	NA	False	NA	NA	NA	232387457	232386700	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_232386700_232387500
H1_mix_00052376	chr2	-	3861	2	NNC	ENSG00000204121.2	novel	1742	9	NA	NA	3997	4535	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGGAAAATGTGGTTGAT	5522	False	NA	-10	True	AATAAA	-20	NA	232415819	232411282	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_232413604_232414279
H1_mix_00052380	chr2	-	2871	18	FSM	ENSG00000171551.12	ENST00000304546.6	2871	18	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_17	13.6376742580819	326	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGCCTCTTCACGGGT	-4	True	NA	-1	True	AATAAA	-14	NA	232487834	232479826	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_232480253_232480398_232480476_232480717_232480814_232481090_232481157_232481505_232481631_232481781_232481850_232482417_232482470_232482549_232482609_232482850_232482955_232483104_232483180_232483415_232483515_232484000_232484224_232484471_232484597_232484800_232484894_232484980_232485092_232485198_232485268_232485867_232486755_232487718
H1_mix_00052382	chr2	-	1732	8	NIC	ENSG00000066248.15	novel	2286	13	NA	NA	-39	-3	combination_of_known_junctions	FALSE	canonical	3	20	junction_7	5.41728149310244	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGATGAAGGTCTACT	NA	False	NA	-23	True	ATTAAA	-21	NA	232891019	232878703	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_232879680_232881145_232881251_232882185_232882266_232883310_232883467_232883980_232884145_232885279_232885370_232888032_232888108_232890933
H1_mix_00052383	chr2	-	2071	10	ISM	ENSG00000066248.15	ENST00000373552.8	2286	13	33257	-511	-3917	-3	3prime_fragment	FALSE	canonical	2	4	junction_8	11.8394611155311	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGATGAAGGTCTACT	6443	False	NA	-23	True	ATTAAA	-21	NA	232894897	232878703	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_232879680_232881145_232881251_232882185_232882266_232883310_232883467_232883980_232884145_232885279_232885370_232888032_232888108_232891357_232891488_232892897_232893051_232894755
H1_mix_00052388	chr2	-	794	6	FSM	ENSG00000085982.15	ENST00000427947.7	794	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	3.00665927567458	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTTGTATGAAAAAGTCT	61	False	NA	NA	False	NA	NA	NA	233566710	233554324	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_233554527_233556854_233557020_233559810_233559925_233562735_233562804_233565355_233565574_233566683
H1_mix_00052389	chr2	-	861	5	FSM	ENSG00000085982.15	ENST00000484528.1	933	5	15	57	15	-57	multi-exon	FALSE	canonical	3	12	junction_4	3.08220700148449	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATTCAGTACCCTAATA	4	True	NA	NA	False	NA	NA	NA	233566767	233556642	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_233557020_233559810_233559925_233562735_233562804_233565355_233565574_233566683
H1_mix_00052390	chr2	-	3157	9	FSM	ENSG00000123485.12	ENST00000411486.7	3157	9	0	0	0	0	multi-exon	FALSE	canonical	3	433	junction_6	41.5600093238681	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGAGTTTGGGTTTTTTTT	-2	True	NA	-4	True	AGTAAA	-18	NA	233854535	233836701	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_233837653_233840608_233842206_233844204_233844284_233845727_233845821_233847396_233847462_233849762_233849860_233852564_233852621_233853843_233853911_233854383
H1_mix_00052392	chr2	-	2032	2	FSM	ENSG00000224287.2	ENST00000438684.1	2032	2	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACTTGGAGTCATAACTA	NA	False	NA	NA	False	AATAAA	-24	NA	233868444	233865436	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_233867351_233868326
H1_mix_00052394	chr2	-	4016	1	FSM	ENSG00000188042.8	ENST00000390645.2	4013	1	0	-3	0	3	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGGAGATTTTCTGTGGA	12	True	NA	-6	True	AATAAA	-21	NA	234497053	234493037	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_234493000_234497100
H1_mix_00052395	chr2	-	3869	2	FSM	ENSG00000188042.8	ENST00000339728.6	3866	2	0	-3	0	3	multi-exon	FALSE	canonical	3	14	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGGAGATTTTCTGTGGA	-16	True	NA	-6	True	AATAAA	-21	NA	234497081	234493037	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_234495837_234496011
H1_mix_00052401	chr2	-	1232	4	FSM	ENSG00000163359.17	ENST00000684508.1	1341	4	0	109	0	-109	multi-exon	FALSE	canonical	3	7	junction_2	0.471404520791032	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAAAGCCCTTGCTAGG	NA	False	NA	NA	False	NA	NA	NA	237342096	237336134	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_237336533_237339014_237339118_237340451_237341151_237342064
H1_mix_00052406	chr2	-	1511	6	FSM	ENSG00000124839.13	ENST00000414278.1	1511	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	328.473438804418	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTCCAAAAATTAAATTGC	14	True	NA	-41	True	NA	NA	NA	237590715	237574354	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_237575129_237575386_237575481_237577256_237577383_237578003_237578156_237586041_237586158_237590466
H1_mix_00052407	chr2	-	342	2	Intergenic	novelGene_771	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	42	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGGTGGGGGAGCCTAA	NA	False	NA	NA	False	NA	NA	NA	237612584	237606783	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_-_237606829_237612287
H1_mix_00052408	chr2	-	2530	7	FSM	ENSG00000132323.9	ENST00000466468.5	2651	7	128	-7	128	0	multi-exon	FALSE	canonical	3	196	junction_6	21.5387248152407	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTTGAGTTATTATACT	3947	False	NA	-3	True	AATAAA	-22	NA	238186929	238170401	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_238170677_238170942_238171025_238173533_238173654_238182064_238182187_238183652_238183741_238184019_238184114_238185180
H1_mix_00052410	chr2	-	1456	12	FSM	ENSG00000132323.9	ENST00000254654.8	1455	12	0	-1	0	1	multi-exon	FALSE	canonical	3	147	junction_8	30.2067257575484	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGAGTTATTATACTG	18	False	238203713	-2	True	AATAAA	-23	NA	238203695	238170400	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_238170677_238170942_238171025_238173533_238173654_238182064_238182187_238183652_238183741_238184019_238184114_238185180_238185288_238188130_238188258_238189852_238189973_238194274_238194332_238194804_238194871_238203498
H1_mix_00052414	chr2	-	1624	3	FSM	ENSG00000144485.11	ENST00000409160.7	1600	3	0	-24	0	21	multi-exon	FALSE	canonical	3	330	junction_2	16.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTGTGTCAAGATATGTA	-1	True	NA	13	True	NA	NA	NA	238240038	238238245	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_238239569_238239660_238239748_238239824
H1_mix_00052415	chr2	-	863	3	FSM	ENSG00000144485.11	ENST00000409182.1	863	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	62	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGGGAGGGAGCTACGGG	711	False	NA	NA	False	AAGAAA	-31	NA	238239958	238238604	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_238239252_238239486_238239569_238239824
H1_mix_00052418	chr2	-	8732	27	NNC	ENSG00000068024.18	novel	8976	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_26	12.8009337677157	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGGTTTCTGCCCGTGC	-3	True	NA	-2	True	AATAAA	-23	NA	239401020	239048167	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_239053137_239053459_239053602_239054748_239054834_239066721_239066856_239068488_239068608_239081094_239081193_239082101_239082222_239084154_239084243_239087558_239087615_239090008_239090117_239095009_239095057_239102775_239102897_239108049_239108184_239111525_239111713_239115052_239115311_239126455_239126680_239134244_239134444_239134526_239134644_239139683_239139797_239144582_239144715_239156651_239156774_239163802_239163924_239176412_239176564_239189832_239190078_239236592_239236665_239352677_239352919_239400691
H1_mix_00052419	chr2	-	8461	27	FSM	ENSG00000068024.18	ENST00000543185.6	8461	27	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_26	12.3286480252369	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGGTTTCTGCCCGTGC	-3	True	NA	-2	True	AATAAA	-23	NA	239401020	239048167	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_239053137_239053459_239053602_239054748_239054834_239066721_239066856_239068488_239068608_239081094_239081193_239082101_239082222_239084154_239084243_239087558_239087615_239090008_239090117_239095009_239095057_239102775_239102897_239108049_239108184_239111525_239111713_239115052_239115311_239126455_239126695_239134244_239134444_239134526_239134644_239139683_239139797_239144582_239144715_239156651_239156774_239163802_239163924_239176412_239176564_239189832_239190078_239236592_239236665_239352677_239352919_239400977
H1_mix_00052420	chr2	-	3188	17	FSM	ENSG00000068024.18	ENST00000493582.5	3188	17	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_16	17.9006590311642	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTCTGTAGGGCTACTC	-3	True	NA	NA	False	GGGGCT	-35	NA	239401654	239094573	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_239095057_239102775_239102897_239108049_239108184_239111525_239111713_239115052_239115311_239126455_239126695_239134244_239134444_239134526_239134644_239139683_239139797_239144582_239144715_239156651_239156774_239163802_239163924_239176412_239176564_239189832_239190078_239236592_239236665_239352677_239352919_239401401
H1_mix_00052421	chr2	-	4855	10	FSM	ENSG00000130414.13	ENST00000678455.1	4849	10	0	-6	0	6	multi-exon	FALSE	canonical	3	4	junction_9	206.512188382713	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTGATTATATTAAAAATC	-1	True	NA	5	True	AATAAA	-24	NA	240025338	239957364	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_239961187_239990073_239990183_240005209_240005296_240007315_240007371_240011616_240011697_240014738_240014861_240018552_240018640_240021196_240021413_240022171_240022341_240025229
H1_mix_00052423	chr2	-	5107	11	FSM	ENSG00000130414.13	ENST00000677764.1	5088	11	0	-19	0	0	multi-exon	FALSE	canonical	1	2	junction_2	261.807352837922	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATACCTGGTGATTATATT	-3	True	NA	-2	True	AATAAA	-17	NA	240025389	239957371	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_239961187_239990073_239990183_240000182_240000388_240005209_240005296_240007315_240007371_240011616_240011697_240014738_240014861_240018552_240018640_240021196_240021413_240022171_240022341_240025226
H1_mix_00052424	chr2	-	7917	9	FSM	ENSG00000130414.13	ENST00000485344.6	4509	9	-58	-3350	5	0	multi-exon	FALSE	canonical	3	592	junction_3	47.2149340781071	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATGTTTTTAATGAGAC	5	True	NA	-21	True	NA	NA	NA	240025381	239957390	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_239961187_239990073_239990183_240005209_240005296_240007315_240007371_240011616_240014861_240018552_240018640_240021196_240021413_240022171_240022341_240025226
H1_mix_00052425	chr2	-	1580	10	FSM	ENSG00000130414.13	ENST00000444548.6	1580	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	208.720972699066	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTTGTAATGTCTTTGT	-3	True	NA	-25	True	NA	NA	NA	240025340	239969220	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_239969763_239990073_239990183_240005209_240005296_240007315_240007371_240011616_240011697_240014738_240014861_240018552_240018640_240021196_240021413_240022171_240022341_240025226
H1_mix_00052428	chr2	-	4049	1	FSM	ENSG00000260942.1	ENST00000567819.1	4000	1	-132	83	-132	-83	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTCAATAAATCCCTTC	473	False	NA	-37	True	NA	NA	NA	240586831	240582782	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_240582800_240586800
H1_mix_00052429	chr2	-	5297	9	FSM	ENSG00000130294.18	ENST00000460788.5	5533	9	240	-4	240	1	multi-exon	FALSE	canonical	3	295	junction_7	46.2140062643351	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTCTGCTGTGGCTTTAT	NA	False	NA	2	True	AATAAA	-28	NA	240724609	240713759	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_240717407_240718049_240718169_240719005_240719199_240719773_240719927_240720913_240721039_240721806_240721885_240722455_240722657_240723412_240723559_240723974
H1_mix_00052430	chr2	-	8858	47	FSM	ENSG00000130294.18	ENST00000649096.1	8987	47	155	-26	0	26	multi-exon	FALSE	canonical	3	224	junction_37	58.0023180880875	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTACGTGTGTTGCAGGGC	-2	True	NA	27	True	NA	NA	NA	240820217	240713734	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_240717407_240718049_240718169_240719005_240719199_240719773_240719927_240720913_240721039_240721806_240721885_240722455_240722657_240723412_240723559_240723974_240724037_240725270_240725405_240726825_240726941_240737062_240737169_240740057_240740143_240740297_240740365_240741268_240741378_240742928_240742985_240743941_240744061_240745426_240745518_240745737_240745910_240746038_240746178_240747235_240747322_240750428_240750548_240758359_240758498_240760664_240760844_240761228_240761378_240762718_240762813_240763018_240763092_240763165_240763347_240765709_240765794_240766914_240767022_240767265_240767346_240769132_240769209_240769626_240769707_240770970_240771105_240773113_240773257_240774182_240774262_240775850_240775927_240782589_240782608_240783043_240783110_240783738_240783817_240784988_240785101_240786334_240786514_240787250_240787317_240788050_240788231_240789235_240789313_240797646_240797813_240820121
H1_mix_00052431	chr2	-	7507	16	FSM	ENSG00000130294.18	ENST00000492812.6	7507	16	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_10	53.4546121074277	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGGCTCTGTCCAATTA	1130	False	NA	-54	True	NA	NA	NA	240744687	240713815	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_240717407_240718049_240718169_240719005_240719199_240719773_240719927_240720913_240721039_240721806_240721885_240722455_240722657_240723412_240723559_240723974_240724037_240725270_240726941_240737062_240737169_240740057_240740143_240740297_240740365_240741268_240741378_240742928_240742985_240743941
H1_mix_00052432	chr2	-	8803	48	FSM	ENSG00000130294.18	ENST00000320389.12	8785	48	0	-18	0	0	multi-exon	FALSE	canonical	1	1	junction_12	82.3123048358383	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGGCTCTGTCCAATTA	-4	True	NA	-54	True	NA	NA	NA	240820219	240713815	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_240717407_240718049_240718169_240719005_240719199_240719773_240719927_240720913_240721039_240721806_240721885_240722455_240722657_240723412_240723559_240723974_240724037_240725270_240725405_240726825_240726941_240728388_240728413_240737062_240737169_240740057_240740143_240740297_240740365_240741268_240741378_240742928_240742985_240743941_240744061_240745426_240745518_240745737_240745910_240746038_240746178_240747235_240747322_240750428_240750548_240758359_240758498_240760664_240760844_240761228_240761378_240762718_240762813_240763018_240763092_240763165_240763347_240765709_240765794_240766914_240767022_240767265_240767346_240769132_240769209_240769626_240769707_240770970_240771105_240773113_240773257_240774182_240774262_240775850_240775927_240782589_240782608_240783043_240783110_240783738_240783817_240784988_240785101_240786334_240786514_240787250_240787317_240788050_240788231_240789235_240789313_240797646_240797813_240820121
H1_mix_00052434	chr2	-	5859	48	FSM	ENSG00000130294.18	ENST00000648129.1	5859	48	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_23	79.5103906303967	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTAACTATAAGACTTGT	3	True	NA	-14	True	AATATA	-34	NA	240820212	240717004	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_240717407_240718049_240718169_240719005_240719199_240719773_240719927_240720913_240721039_240721806_240721885_240722455_240722657_240723412_240723559_240723974_240724037_240725270_240725405_240726825_240726941_240737062_240737169_240740057_240740143_240740297_240740365_240741268_240741378_240742928_240742985_240743941_240744061_240745426_240745518_240745737_240745910_240746038_240746178_240747235_240747322_240750428_240750548_240757318_240757595_240758359_240758498_240760664_240760844_240761228_240761378_240762718_240762813_240763018_240763092_240763165_240763347_240765709_240765794_240766914_240767022_240767265_240767346_240769132_240769209_240769626_240769707_240770970_240771105_240773113_240773257_240774182_240774262_240775850_240775927_240782589_240782608_240783043_240783110_240783738_240783817_240784988_240785101_240786334_240786514_240787250_240787317_240788050_240788231_240789235_240789313_240797646_240797813_240820121
H1_mix_00052436	chr2	-	4095	37	FSM	ENSG00000130294.18	ENST00000649064.1	4095	37	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_27	31.0500889643067	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTAAATTTGTGTGCCTT	-4	True	NA	NA	False	NA	NA	NA	240820219	240726707	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_240726941_240737062_240737169_240740057_240740143_240740297_240740365_240741268_240741378_240742928_240742985_240743941_240744061_240745426_240745518_240745737_240745910_240746038_240746178_240747235_240747322_240750428_240750548_240758359_240758498_240760664_240760844_240761228_240761378_240762718_240762813_240763018_240763092_240763165_240763347_240765709_240765794_240766914_240767022_240767265_240767346_240769132_240769209_240769626_240769707_240770970_240771105_240773113_240773257_240774182_240774262_240775850_240775927_240782589_240782608_240783043_240783110_240783738_240783817_240784988_240785101_240786334_240786514_240787250_240787317_240788050_240788231_240789235_240789313_240797646_240797813_240820121
H1_mix_00052437	chr2	-	2448	5	FSM	ENSG00000122085.17	ENST00000464344.6	3993	5	45	1500	0	1385	multi-exon	FALSE	canonical	3	16	junction_1	26.0480325552622	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGGAGGCGAAGGAGGA	13	True	NA	NA	False	GGGGCT	-17	NA	241102287	241073668	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_241075683_241089187_241089366_241089979_241090045_241094276_241094433_241102252
H1_mix_00052438	chr2	-	2647	5	FSM	ENSG00000122085.17	ENST00000455202.6	2626	5	0	-21	0	0	multi-exon	FALSE	canonical	3	15	junction_3	24.8445164976097	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTATTGTGGTACAGTA	NA	False	NA	-19	True	ATTAAA	-33	NA	241102331	241087203	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_241089366_241089979_241090045_241094276_241094433_241097242_241097428_241102252
H1_mix_00052440	chr2	-	3152	6	NIC	ENSG00000122085.17	novel	4529	7	NA	NA	0	-3	intron_retention	FALSE	canonical	3	53	junction_2	20.0638979263751	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAGGTTGTAGATGGCTT	1	True	NA	-1	True	GATAAA	-25	NA	241102299	241089171	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_241089366_241089979_241090045_241094276_241096439_241097242_241097428_241099395_241099895_241102252
H1_mix_00052442	chr2	-	1587	4	FSM	ENSG00000122085.17	ENST00000391980.7	1587	4	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	12.3648246606609	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGGTTTTAGTACATCA	13	True	NA	-16	True	AATAAA	-16	NA	241102287	241095570	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_241096439_241097242_241097428_241099395_241099895_241102252
H1_mix_00052447	chr2	-	5161	14	FSM	ENSG00000115687.14	ENST00000403638.7	5161	14	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_6	26.4425244746359	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAACCTGTGATTATTGCT	7	True	NA	NA	False	ATTAAA	-20	NA	241149463	241113306	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_241115178_241115287_241115414_241122731_241122900_241123948_241124134_241126195_241127452_241132873_241133031_241135870_241136040_241137003_241137265_241137952_241138088_241138653_241138795_241139884_241140056_241140520_241140754_241142836_241143075_241149413
H1_mix_00052450	chr2	-	6360	28	FSM	ENSG00000115677.18	ENST00000391975.5	6372	28	4	8	4	-5	multi-exon	FALSE	canonical	3	315	junction_27	231.316047550954	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCACGCTGCCGCCTG	NA	False	NA	-12	True	AATAAA	-33	NA	241272882	241227271	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_241229688_241229832_241229962_241230152_241230270_241230758_241230945_241233819_241233964_241235120_241235256_241235489_241235595_241236614_241236770_241238648_241238788_241239601_241239821_241239900_241240123_241242459_241242679_241246751_241246884_241247055_241247143_241248002_241248117_241248243_241248349_241249840_241249981_241252956_241253036_241253392_241253498_241255050_241255159_241255373_241255581_241256183_241256400_241256599_241256807_241262710_241262927_241264447_241264606_241266793_241266907_241268476_241268542_241272760
H1_mix_00052451	chr2	-	6343	28	FSM	ENSG00000115677.18	ENST00000310931.10	6322	28	0	-21	0	-3	multi-exon	FALSE	canonical	3	462	junction_27	210.721616003919	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCACGCTGCCGCCTGTG	-10	True	NA	-10	True	AATAAA	-35	NA	241315672	241227269	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_241229688_241229832_241229962_241230152_241230270_241230758_241230945_241233819_241233964_241235120_241235256_241235489_241235595_241236614_241236770_241238648_241238788_241239601_241239821_241239900_241240123_241242459_241242679_241246751_241246884_241247055_241247143_241248002_241248117_241248243_241248349_241249840_241249981_241252956_241253036_241253392_241253498_241255050_241255159_241255373_241255581_241256183_241256400_241256599_241256807_241262710_241262927_241264447_241264606_241266793_241266907_241268476_241268542_241315569
H1_mix_00052452	chr2	-	4489	28	FSM	ENSG00000115677.18	ENST00000391976.6	4489	28	0	0	0	0	multi-exon	FALSE	canonical	3	534	junction_27	201.263771265826	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTGCCCTCTTCCTTTCC	424	False	NA	NA	False	AATAAA	-26	NA	241315292	241229211	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_241229688_241229832_241229962_241230152_241230270_241230758_241230945_241233819_241233964_241235120_241235256_241235489_241235595_241236614_241236770_241238648_241238788_241239601_241239821_241239900_241240123_241242459_241242679_241246751_241246884_241247055_241247143_241248002_241248117_241248243_241248349_241249840_241249981_241252956_241253036_241253392_241253498_241255050_241255159_241255373_241255581_241256183_241256400_241256599_241256807_241262710_241262927_241264447_241264606_241266793_241266907_241268476_241268542_241315101
H1_mix_00052457	chr2	-	2430	11	FSM	ENSG00000115694.15	ENST00000535007.5	2459	11	29	0	22	0	multi-exon	FALSE	canonical	3	126	junction_10	252.400891440581	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTGCTTCTCTAGAGGT	26	False	NA	-1	True	AATAAA	-40	NA	241508666	241494706	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_241495702_241496397_241496535_241497615_241497688_241498234_241498350_241498638_241498785_241498988_241499175_241499256_241499415_241500172_241500282_241500739_241500797_241501477_241501709_241508442
H1_mix_00052458	chr2	-	2498	12	FSM	ENSG00000115694.15	ENST00000403346.7	2210	12	22	-310	22	0	multi-exon	FALSE	canonical	3	82	junction_11	252.580532939169	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTGCTTCTCTAGAGGT	26	False	NA	-1	True	AATAAA	-40	NA	241508666	241494706	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_241495702_241496397_241496535_241497615_241497688_241498234_241498350_241498638_241498785_241498988_241499175_241499256_241499415_241500172_241500282_241500739_241500797_241501477_241501709_241508005_241508136_241508504
H1_mix_00052459	chr2	-	2556	11	FSM	ENSG00000115694.15	ENST00000543554.5	2556	11	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_10	282.060082251991	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTGCTTCTCTAGAGGT	NA	False	NA	-1	True	AATAAA	-40	NA	241509572	241494706	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_241495702_241496397_241496535_241497615_241497688_241498234_241498350_241498638_241498785_241498988_241499175_241499256_241499415_241500172_241500282_241500739_241500797_241501477_241501709_241509222
H1_mix_00052460	chr2	-	2253	11	FSM	ENSG00000115694.15	ENST00000401869.5	2251	11	0	-2	0	0	multi-exon	FALSE	canonical	3	740	junction_7	86.1890944377536	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGGTGTGTGTGGTGGGG	-22	True	NA	-5	True	AATAAA	-18	NA	241508362	241495016	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_241495702_241496397_241496535_241497615_241497688_241498234_241498350_241498638_241498785_241498988_241499175_241499256_241499415_241500172_241500282_241500739_241500797_241501477_241501709_241508005
H1_mix_00052462	chr2	-	2028	7	FSM	ENSG00000115694.15	ENST00000487962.5	2024	7	0	-4	0	0	multi-exon	FALSE	canonical	3	816	junction_4	68.5370945790185	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTCAATAAAGACCTGAC	8720	False	NA	13	True	NA	NA	NA	241499972	241495045	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_241495702_241496397_241496535_241497615_241497688_241498234_241498350_241498638_241498785_241498988_241499175_241499256
H1_mix_00052466	chr2	-	4516	12	FSM	ENSG00000115694.15	ENST00000316586.9	4515	12	0	-1	0	1	multi-exon	FALSE	canonical	3	466	junction_11	152.484764175917	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCCACAAACCCATCCAAC	9	True	NA	NA	False	AATAAA	-21	NA	241508584	241492668	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_241495702_241496397_241496535_241497615_241497688_241498234_241498350_241498638_241498785_241498988_241499175_241499256_241499415_241500172_241500282_241500739_241500797_241501477_241501709_241508005_241508136_241508442
H1_mix_00052470	chr2	-	786	5	FSM	ENSG00000176946.13	ENST00000402136.5	785	5	0	-1	0	1	multi-exon	FALSE	canonical	3	13	junction_4	256.902218752583	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGCGTAGGCTGTACAT	2173	False	NA	-1	True	AATAAA	-39	NA	241617501	241584403	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_241584726_241601895_241602000_241602969_241603080_241606313_241606474_241617411
H1_mix_00052471	chr2	-	2077	6	FSM	ENSG00000176946.13	ENST00000407315.6	2076	6	0	-1	0	1	multi-exon	FALSE	canonical	3	521	junction_4	35.3134535269492	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGCGTAGGCTGTACAT	-43	True	NA	-1	True	AATAAA	-39	NA	241637158	241584403	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_241584726_241601895_241602000_241602969_241603080_241606313_241606474_241632916_241634080_241636940
H1_mix_00052473	chr2	-	1056	5	FSM	ENSG00000168393.13	ENST00000305784.7	1051	5	0	-5	0	5	multi-exon	FALSE	canonical	3	553	junction_2	183.80016322082	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGAACGCTTCACTTTTC	-11	True	NA	-5	True	AGTAAA	-20	NA	241686815	241675741	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_241676238_241678451_241678650_241680228_241680320_241685768_241685878_241686653
H1_mix_00052474	chr2	-	1094	4	FSM	ENSG00000168393.13	ENST00000400770.6	1089	4	0	-5	0	5	multi-exon	FALSE	canonical	3	237	junction_2	327.031429002712	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGAACGCTTCACTTTTC	NA	False	NA	-5	True	AGTAAA	-20	NA	241686944	241675741	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_241676238_241678451_241678650_241685768_241685878_241686653
H1_mix_00052475	chr2	-	890	2	FSM	ENSG00000168393.13	ENST00000464603.1	890	2	0	0	0	0	multi-exon	FALSE	canonical	3	920	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCCTCCCACCTCAGCA	23	True	NA	NA	False	NA	NA	NA	241686781	241685115	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_241685878_241686653
H1_mix_00052476	chr2	-	507	3	FSM	ENSG00000216921.9	ENST00000401641.2	507	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTCTCTAGCGCATCTCT	NA	False	NA	NA	False	NA	NA	NA	241902551	241894036	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_241894340_241897185_241897335_241902496
H1_mix_00052477	chr2	+	268	1	Intergenic	novelGene_657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAGGCTGAGACACTTTA	NA	False	NA	NA	False	NA	NA	NA	5003469	5003737	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_5003500_5003700
H1_mix_00052478	chr2	+	297	1	Intergenic	novelGene_660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTCATGTCCGACTAATC	2922	False	NA	NA	False	CATAAA	-20	NA	12572927	12573224	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_12572900_12573200
H1_mix_00052479	chr2	+	277	1	Intergenic	novelGene_661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTAACTAAATTATCTGC	NA	False	NA	NA	False	NA	NA	NA	12628994	12629271	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_12629000_12629300
H1_mix_00052480	chr2	+	267	1	Intergenic	novelGene_663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAATATAAGAAGGCAGGA	NA	False	NA	NA	False	NA	NA	NA	12631511	12631778	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_12631500_12631800
H1_mix_00052481	chr2	+	303	1	Intergenic	novelGene_664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGAATGTTTTTAAAAGC	NA	False	NA	NA	False	NA	NA	NA	15862267	15862570	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_15862300_15862600
H1_mix_00052483	chr2	+	205	1	Intergenic	novelGene_668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	287	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	26962238	26962443	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_26962200_26962400
H1_mix_00052484	chr2	+	243	1	Intergenic	novelGene_669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGAGGGGGGGGGGGGGGGG	7	False	NA	NA	False	NA	NA	NA	32916351	32916594	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_32916400_32916600
H1_mix_00052485	chr2	+	524	1	Intergenic	novelGene_674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGCCTTTTGTCAAACAA	NA	False	NA	NA	False	NA	NA	NA	38559506	38560030	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_38559500_38560000
H1_mix_00052486	chr2	+	2526	1	Antisense	novelGene_ENSG00000115904.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAAGGAACTCTTTTTTT	NA	False	NA	NA	False	ACTAAA	-5	NA	39051388	39053914	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_+_39051400_39053900
H1_mix_00052487	chr2	+	1286	1	Intergenic	novelGene_676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAGAGAGACTCACACTT	NA	False	NA	NA	False	NA	NA	NA	42433406	42434692	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_42433400_42434700
H1_mix_00052488	chr2	+	804	1	Intergenic	novelGene_677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	42468159	42468963	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_42468200_42469000
H1_mix_00052490	chr2	+	309	1	Intergenic	novelGene_678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	614	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAAAAACCTTTTCTAAGA	NA	False	NA	NA	False	NA	NA	NA	47401241	47401550	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_47401200_47401600
H1_mix_00052492	chr2	+	5532	1	Intergenic	novelGene_679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATAATTACATCTGCGG	NA	False	NA	NA	False	AAAAAG	-1	NA	53662485	53668017	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_53662500_53668000
H1_mix_00052494	chr2	+	237	1	Intergenic	novelGene_682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	286	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAAAGCGGTCCACCCTC	776	False	NA	NA	False	NA	NA	NA	61889202	61889439	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_61889200_61889400
H1_mix_00052495	chr2	+	6811	1	Intergenic	novelGene_688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTTTTAAAAAAAGAAATAT	3620	False	NA	NA	False	NA	NA	NA	69906581	69913392	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_69906600_69913400
H1_mix_00052496	chr2	+	769	1	Intergenic	novelGene_689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	346	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGAAATCACAAATACCATT	NA	False	NA	NA	False	NA	NA	NA	70073391	70074160	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_70073400_70074200
H1_mix_00052498	chr2	+	3863	1	Intergenic	novelGene_694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	253	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGCAC	NA	False	NA	NA	False	NA	NA	NA	73744184	73748047	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_73744200_73748000
H1_mix_00052499	chr2	+	258	1	Intergenic	novelGene_702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTTTTGCATAAAACCCT	NA	False	NA	NA	False	NA	NA	NA	80161960	80162218	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_80162000_80162200
H1_mix_00052500	chr2	+	267	1	Intergenic	novelGene_703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGCCCATTTTATGACAA	NA	False	NA	NA	False	NA	NA	NA	80878428	80878695	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_80878400_80878700
H1_mix_00052501	chr2	+	286	1	Intergenic	novelGene_708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	311	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGACTGTTCTTTTCCT	1424	False	NA	NA	False	NA	NA	NA	90303079	90303365	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_90303100_90303400
H1_mix_00052502	chr2	+	298	1	Intergenic	novelGene_709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGCAAAGAATAG	NA	False	NA	NA	False	NA	NA	NA	91493690	91493988	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_91493700_91494000
H1_mix_00052504	chr2	+	438	1	Intergenic	novelGene_720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTCACTTTTCCTATT	NA	False	NA	NA	False	NA	NA	NA	134334522	134334960	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_134334500_134335000
H1_mix_00052506	chr2	+	1861	1	Intergenic	novelGene_724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTTAAGATTCATCCTT	2492	False	NA	NA	False	NA	NA	NA	148647616	148649477	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_148647600_148649500
H1_mix_00052508	chr2	+	280	1	Intergenic	novelGene_734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGAGATAGGCTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	163786182	163786462	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_163786200_163786500
H1_mix_00052509	chr2	+	223	1	Intergenic	novelGene_735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCACAAACTATGCCT	NA	False	NA	NA	False	NA	NA	NA	164299309	164299532	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_164299300_164299500
H1_mix_00052512	chr2	+	304	1	Intergenic	novelGene_740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTTCTAGTTTAAGTTC	NA	False	NA	NA	False	AAAAAG	-9	NA	174282220	174282524	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_174282200_174282500
H1_mix_00052516	chr2	+	672	1	Intergenic	novelGene_747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTGTCCTAAATGATAT	NA	False	NA	NA	False	NA	NA	NA	196737335	196738007	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_196737300_196738000
H1_mix_00052518	chr2	+	299	1	Intergenic	novelGene_752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGGGGAAATTATAAGG	NA	False	NA	NA	False	NA	NA	NA	203964254	203964553	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_203964300_203964600
H1_mix_00052519	chr2	+	268	1	Intergenic	novelGene_754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTCAAGCCCAAATTTCT	2836	False	NA	NA	False	NA	NA	NA	209081195	209081463	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_209081200_209081500
H1_mix_00052520	chr2	+	320	1	Intergenic	novelGene_757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTGTGGCCAGGGCATAT	NA	False	NA	NA	False	NA	NA	NA	214840395	214840715	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_214840400_214840700
H1_mix_00052521	chr2	+	214	1	Intergenic	novelGene_764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGACGTCAGGCACCTCAG	NA	False	NA	NA	False	NA	NA	NA	218178024	218178238	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_218178000_218178200
H1_mix_00052522	chr2	+	1643	1	Intergenic	novelGene_765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTTGGGAGCAGCAGATC	NA	False	NA	NA	False	NA	NA	NA	218771695	218773338	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_218771700_218773300
H1_mix_00052523	chr2	+	203	1	Intergenic	novelGene_770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGTAGGGAAAGAAACTTTA	NA	False	NA	NA	False	NA	NA	NA	230571883	230572086	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_230571900_230572100
H1_mix_00052524	chr2	+	688	1	Intergenic	novelGene_772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTGCAAGGTACAGCCCA	7000	False	NA	NA	False	NA	NA	NA	237610882	237611570	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_237610900_237611600
H1_mix_00052526	chr2	+	433	6	FSM	ENSG00000143727.16	ENST00000405364.2	414	6	-19	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	994.87518815176	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAATCCTGTTTTTGAAGA	1	True	NA	NA	False	NA	NA	NA	264899	275200	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_265008_269300_269348_271865_271940_272036_272066_272191_272306_275139
H1_mix_00052529	chr2	+	285	2	Antisense	novelGene_ENSG00000272342.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTCAGAGCCTGGCGAG	NA	False	NA	NA	False	NA	NA	NA	740156	740819	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_+_740304_740681
H1_mix_00052531	chr2	+	1861	3	NNC	ENSG00000223751.2	novel	2012	2	NA	NA	-62	-5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	3	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATACATTGTATTTGTT	NA	False	NA	6	True	AATAAA	-16	NA	740822	749418	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_741131_747657_747848_748055
H1_mix_00052532	chr2	+	2855	7	NNC	ENSG00000172554.12	novel	1818	8	NA	NA	-7	-7	intron_retention	FALSE	canonical	3	13	junction_2	43.1177328820624	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGAATGCCTTTGTCTTG	-15	True	NA	NA	False	AATAAA	-18	NA	950860	1161664	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_951069_1083517_1083656_1098200_1098253_1098352_1098411_1137621_1137666_1137767_1137810_1159351
H1_mix_00052533	chr2	+	1909	17	FSM	ENSG00000172554.12	ENST00000308624.10	1907	17	-4	2	-4	-2	multi-exon	FALSE	canonical	3	28	junction_16	28.6825295258281	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACGGGTCCTCCTTGTTA	-1	True	NA	4	True	AATAAA	-19	NA	950844	1367611	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_951069_1083517_1083656_1098195_1098253_1098352_1098411_1137621_1137666_1137767_1137810_1165547_1165636_1173091_1173184_1209102_1209231_1237887_1238018_1239737_1239777_1247326_1247444_1259369_1259442_1267364_1267572_1308493_1308587_1316264_1316376_1367342
H1_mix_00052534	chr2	+	1032	5	NIC	ENSG00000172554.12	novel	666	8	NA	NA	30	549	combination_of_known_splicesites	FALSE	canonical	3	14	junction_2	37.729298959827	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAGGTTGGAGTCACCA	22	False	NA	NA	False	NA	NA	NA	950897	1166184	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_951069_1083517_1083656_1137621_1137666_1137767_1137810_1165547
H1_mix_00052537	chr2	+	1494	2	FSM	ENSG00000171853.16	ENST00000482645.1	1538	2	0	44	0	-44	multi-exon	FALSE	canonical	3	182	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGACATTTGAACTCCAG	19	True	NA	-44	True	NA	NA	NA	3379719	3388956	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_3379877_3387619
H1_mix_00052538	chr2	+	838	4	FSM	ENSG00000171853.16	ENST00000411973.3	838	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	96.4030889316082	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCACACGACAGATTCACT	13	False	NA	NA	False	NA	NA	NA	3388126	3421970	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_3388671_3401776_3401894_3421699_3421787_3421880
H1_mix_00052539	chr2	+	240	1	Genic_Genomic	ENSG00000171853.16	novel	NA	NA	NA	NA	6220	79	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTGTTGGATGGTGCC	3943	False	NA	84	True	NA	NA	NA	3484933	3485173	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr2_+_3484900_3485200
H1_mix_00052540	chr2	+	686	1	FSM	ENSG00000271868.1	ENST00000607415.1	473	1	-246	33	-246	-33	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGACACCTCAATAAAAACGA	NA	False	NA	NA	False	TATAAA	-1	NA	3496709	3497395	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_3496700_3497400
H1_mix_00052541	chr2	+	710	7	FSM	ENSG00000171863.15	ENST00000646909.1	710	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	4266.6979425937	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTTTCAGTTATGTTTT	-4	True	NA	NA	False	AATAAA	-19	NA	3575315	3580919	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_3575351_3575556_3575685_3575816_3575889_3576486_3576631_3577709_3577775_3580109_3580261_3580804
H1_mix_00052543	chr2	+	634	1	FSM	ENSG00000272002.1	ENST00000606959.1	634	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCTTCTGTGCATTATT	NA	False	NA	NA	False	AATAAA	-23	NA	7260870	7261504	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_7260900_7261500
H1_mix_00052545	chr2	+	1117	2	ISM	ENSG00000151693.11	ENST00000641030.1	949	11	10919	23403	10919	-20868	internal_fragment	FALSE	canonical	3	74	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATAAGGAGCTCTCAGTG	NA	False	NA	NA	False	TATAAA	-21	NA	9334039	9335435	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_9334814_9335092
H1_mix_00052546	chr2	+	504	3	FSM	ENSG00000119203.14	ENST00000489629.1	547	3	43	0	43	0	multi-exon	FALSE	canonical	3	784	junction_2	63	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAAGGTTATGGTTCCTG	NA	False	NA	NA	False	AATACA	-43	NA	9441772	9448350	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_9441977_9443514_9443662_9448197
H1_mix_00052547	chr2	+	863	6	FSM	ENSG00000134330.19	ENST00000482918.5	863	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	58.264912254289	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTAGATGATTTTTCAGG	7	True	NA	-1	True	AATAAA	-2	NA	9473817	9488444	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_9473900_9475986_9476040_9478221_9478371_9481285_9481448_9484431_9484551_9488146
H1_mix_00052550	chr2	+	273	3	FSM	ENSG00000115750.17	ENST00000625239.2	273	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	29.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGAGAGCCTATTGATAG	-27	True	NA	NA	False	NA	NA	NA	9843442	9846113	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_9843560_9845219_9845319_9846056
H1_mix_00052552	chr2	+	1045	6	FSM	ENSG00000115750.17	ENST00000492648.2	1045	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	6.8	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGATAGCAAGTCCATTTG	NA	False	NA	NA	False	AATAAA	-30	NA	9875997	9913709	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_9876019_9882705_9882806_9904858_9905007_9910735_9910914_9911510_9911558_9913158
H1_mix_00052553	chr2	+	3231	1	FSM	ENSG00000269973.1	ENST00000602458.1	3231	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTATCTCCCTGCAGGGTA	NA	False	NA	NA	False	AATATA	-22	NA	9936359	9939590	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_9936400_9939600
H1_mix_00052555	chr2	+	2313	8	ISM	ENSG00000134317.18	ENST00000405379.6	1881	12	24958	-1067	-9183	-5	3prime_fragment	FALSE	canonical	3	12	junction_7	3.99489470117416	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAATATGTCATTTCCTGT	239	False	NA	6	True	ATTAAA	-17	NA	9986122	10002272	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_9986283_9990695_9990748_9992006_9992147_9993206_9993245_9995878_9995971_9996315_9996402_9998964_9999030_10000592
H1_mix_00052560	chr2	+	7490	3	FSM	ENSG00000150873.12	ENST00000381585.8	7902	3	378	34	377	-34	multi-exon	FALSE	canonical	1	1	junction_1	0.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTGTTGGCAAAATAAACT	378	False	NA	-31	True	NA	NA	NA	11133505	11151283	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_11133592_11140509_11140550_11143919
H1_mix_00052561	chr2	+	660	3	FSM	ENSG00000162976.13	ENST00000464700.5	453	3	-121	-86	22	86	multi-exon	FALSE	canonical	3	169	junction_1	5.5	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCCAGCAGGCCGAGTGG	NA	False	NA	NA	False	NA	NA	NA	11155393	11160905	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_11155690_11160465_11160549_11160624
H1_mix_00052565	chr2	+	3936	5	NNC	ENSG00000071575.12	novel	4344	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_2	92.507769943935	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGGAGTCTGGAAAATGA	0	True	NA	77	True	AATAAA	-22	NA	12716909	12742734	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_12717011_12717251_12718129_12718321_12718578_12723259_12723553_12740325
H1_mix_00052567	chr2	+	2739	25	FSM	ENSG00000079785.16	ENST00000678536.1	2739	25	0	0	0	0	multi-exon	FALSE	canonical	3	1246	junction_11	147.284847791241	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGAAGGTTTGTGTC	168	False	NA	11	True	AATAAA	-14	NA	15591732	15631101	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_15591950_15595144_15595197_15595489_15595554_15596733_15596764_15597374_15597472_15599668_15599717_15602547_15602632_15603191_15603276_15603813_15603891_15604436_15604510_15605949_15606027_15606149_15606265_15607174_15607314_15613223_15613285_15617243_15617343_15618180_15618271_15620207_15620397_15621064_15621117_15623435_15623583_15627053_15627146_15628444_15628711_15628796_15628840_15629601_15629698_15629989_15630111_15630775
H1_mix_00052568	chr2	+	4038	24	FSM	ENSG00000079785.16	ENST00000478695.2	4038	24	0	0	0	0	multi-exon	FALSE	canonical	3	1246	junction_11	149.731328383318	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGAAGGTTTGTGTC	168	False	NA	11	True	AATAAA	-14	NA	15591732	15631101	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_15591950_15595144_15595197_15595489_15595554_15596733_15596764_15597374_15597472_15599668_15599717_15602547_15602632_15603191_15603276_15603813_15603891_15604436_15604510_15605949_15606027_15606149_15606265_15607174_15607314_15613223_15613285_15617243_15617343_15618180_15618271_15620207_15620397_15621064_15621117_15623435_15623583_15627053_15628711_15628796_15628840_15629601_15629698_15629989_15630111_15630775
H1_mix_00052570	chr2	+	2430	23	FSM	ENSG00000079785.16	ENST00000678786.1	2430	23	0	0	0	0	multi-exon	FALSE	canonical	1	19	junction_20	366.640818335086	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGAAGGTTTGTGTC	168	False	NA	11	True	AATAAA	-14	NA	15591732	15631101	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_15591950_15595144_15595197_15595489_15595554_15596733_15596764_15597374_15597472_15599668_15599717_15602547_15602632_15603191_15603276_15603813_15603891_15604436_15604510_15605949_15606027_15606149_15606265_15607174_15607314_15613223_15613285_15617243_15617343_15618180_15618271_15620207_15620397_15621064_15621117_15623435_15623583_15627053_15627146_15629601_15629698_15629989_15630111_15630775
H1_mix_00052571	chr2	+	2988	3	NNC	ENSG00000134323.12	novel	2613	3	NA	NA	-65	0	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_1	300	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGCAACTCAACCTTTTC	246	False	NA	16	True	AATAAA	-16	NA	15940484	15947004	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_15941054_15941947_15942855_15945492
H1_mix_00052572	chr2	+	2569	2	ISM	ENSG00000134323.12	ENST00000281043.4	2613	3	1248	0	1232	0	3prime_fragment	FALSE	canonical	3	664	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGCAACTCAACCTTTTC	-2	True	NA	16	True	AATAAA	-16	NA	15941797	15947004	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_15942855_15945492
H1_mix_00052573	chr2	+	2098	5	NNC	ENSG00000163032.12	novel	2428	4	NA	NA	5	-532	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_1	223.105776482815	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACAGCAGGTAGGCTGC	-4	True	NA	72	True	NA	NA	NA	17539971	17656486	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_17540183_17540704_17540919_17592069_17592237_17649409_17649626_17655196
H1_mix_00052574	chr2	+	1884	4	NIC	ENSG00000163032.12	novel	576	3	NA	NA	5	-532	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	237.101009885848	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACAGCAGGTAGGCTGC	-4	True	NA	72	True	NA	NA	NA	17539971	17656486	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_17540183_17592069_17592237_17649409_17649626_17655196
H1_mix_00052577	chr2	+	6101	8	FSM	ENSG00000119771.15	ENST00000471654.1	6385	8	279	5	279	0	multi-exon	FALSE	canonical	3	9	junction_6	3.9070840946221	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGAAGCCAACGTAATCT	NA	False	NA	9	True	AATAAA	-19	NA	23689063	23708606	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_23691877_23693268_23693529_23695622_23695822_23695950_23696134_23696332_23696514_23703185_23703380_23703718_23703864_23706480
H1_mix_00052578	chr2	+	249	1	FSM	ENSG00000234946.1	ENST00000445371.1	506	1	267	-10	267	10	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCAGCATCATCTTCCTA	291	False	NA	NA	False	NA	NA	NA	23944112	23944361	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_23944100_23944400
H1_mix_00052580	chr2	+	1137	6	FSM	ENSG00000119782.14	ENST00000438630.5	1137	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	253.656933672234	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTCCATCCTTATTTT	3	True	NA	14	True	AATAAA	-19	NA	24049730	24063681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_24049887_24053901_24053950_24054103_24054193_24054472_24054541_24060813_24060927_24063018
H1_mix_00052582	chr2	+	1465	4	NIC	ENSG00000219626.9	novel	703	5	NA	NA	7	-9	intron_retention	FALSE	canonical	3	11	junction_2	9.0921211313239	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCCCTCACTAAGTGTCC	7	True	NA	-5	True	AATAAA	-10	NA	24123475	24169628	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_24124461_24135118_24135188_24164197_24164336_24169355
H1_mix_00052585	chr2	+	4745	22	FSM	ENSG00000084676.16	ENST00000407230.5	4745	22	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	43.7176054346908	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGCTTTTGTCGGGAGA	22	False	NA	NA	False	AAAAAG	-2	NA	24564309	24768543	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_24564431_24584475_24584561_24643965_24644123_24658660_24658767_24673365_24673464_24682950_24683129_24691480_24691661_24693251_24693348_24697657_24697799_24705085_24705234_24706567_24707889_24710930_24711112_24726588_24726707_24728307_24728477_24729500_24729816_24739431_24739534_24741783_24742187_24751981_24752157_24757972_24758157_24762686_24762777_24768078_24768136_24768223
H1_mix_00052587	chr2	+	1579	5	FSM	ENSG00000138092.11	ENST00000491031.5	1579	5	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	66.8524494689611	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAAGGGTCAGTAAACAC	270	False	NA	NA	False	NA	NA	NA	24793399	24816571	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_24793502_24793851_24793966_24799674_24799845_24814375_24814494_24815496
H1_mix_00052588	chr2	+	3496	4	ISM	ENSG00000138092.11	ENST00000260662.2	4085	8	-62	4907	0	-321	intron_retention	FALSE	canonical	3	35	junction_1	79.6045783161301	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGCTGTATGGG	270	False	NA	NA	False	NA	NA	NA	24793399	24817466	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_24793521_24793851_24793966_24799674_24799845_24814375
H1_mix_00052591	chr2	+	5932	4	ISM	ENSG00000157833.13	ENST00000401533.7	4164	6	16	0	16	0	intron_retention	FALSE	canonical	3	143	junction_3	10.8730042868667	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGGTGCCAGCTGCTTT	-5	True	NA	33	True	AATAAA	-33	NA	26173103	26189663	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_26173333_26176343_26176485_26182966_26183098_26184232
H1_mix_00052593	chr2	+	747	5	NIC	ENSG00000115163.15	novel	745	6	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	3	73	junction_4	235.672442173454	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAAATCTGTGTTTTGTG	-5	True	NA	NA	False	AATAAA	-23	NA	26786055	26801060	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_26786297_26792130_26792241_26793144_26793327_26793811_26793894_26800928
H1_mix_00052594	chr2	+	1508	3	ISM	ENSG00000084764.12	ENST00000648289.1	1281	8	10542	-762	10497	-4	3prime_fragment	FALSE	canonical	3	59	junction_1	4	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACATGCCATGTGTCCCT	1962	False	NA	6	True	AATAAA	-14	NA	27025295	27027192	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_27025738_27025879_27026033_27026279
H1_mix_00052595	chr2	+	792	3	FSM	ENSG00000119777.20	ENST00000495312.1	804	3	12	0	12	0	multi-exon	FALSE	canonical	3	314	junction_2	13	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGTGCAGGGGCCTTTG	9588	False	NA	NA	False	NA	NA	NA	27032921	27035481	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27033167_27034066_27034267_27035134
H1_mix_00052597	chr2	+	740	8	FSM	ENSG00000119777.20	ENST00000425720.5	740	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	152.465854323825	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGTGACATGGCCTGCAA	3516	False	NA	NA	False	NA	NA	NA	27036490	27038794	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27036593_27036704_27036787_27037076_27037179_27037560_27037703_27037814_27037893_27038145_27038238_27038483_27038533_27038701
H1_mix_00052603	chr2	+	611	3	FSM	ENSG00000084774.14	ENST00000479002.1	614	3	0	3	0	-3	multi-exon	FALSE	canonical	3	429	junction_1	23	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAACAAAGA	1454	False	NA	NA	False	NA	NA	NA	27234595	27235873	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27234686_27235244_27235428_27235535
H1_mix_00052605	chr2	+	3065	2	FSM	ENSG00000234072.1	ENST00000447070.1	3060	2	-5	0	-5	0	multi-exon	FALSE	canonical	1	1	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATAAAAAAATAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	27356240	27360256	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27356857_27357807
H1_mix_00052608	chr2	+	2503	18	NNC	ENSG00000115216.14	novel	2174	19	NA	NA	-346	0	at_least_one_novel_splicesite	TRUE	canonical	3	112	junction_14	410.794175556665	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCGTCGTGTGTTCGCG	NA	False	NA	27	True	AATAAA	-16	NA	27428284	27442255	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_27428732_27433253_27433484_27433672_27433796_27433988_27434091_27434470_27434561_27434721_27434763_27435132_27435228_27436752_27436837_27437046_27437106_27437261_27437361_27439765_27439899_27440402_27440509_27440651_27440703_27440804_27440926_27441126_27441181_27441266_27441331_27441566_27441623_27441707
H1_mix_00052609	chr2	+	682	6	FSM	ENSG00000157992.12	ENST00000453171.5	665	6	-17	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	210.084364006463	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGATTATGATTCCTTT	-12	True	NA	18	True	AATAAA	-19	NA	27442380	27444295	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27442441_27442841_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444188
H1_mix_00052612	chr2	+	3871	13	NIC	ENSG00000243943.10	novel	3417	14	NA	NA	49	0	intron_retention	FALSE	canonical	3	53	junction_1	71.4867411949004	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCCAGTGTTCTTTGAC	36	True	NA	22	True	AATAAA	-16	NA	27583092	27623096	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_27583717_27598069_27598255_27599582_27599679_27599969_27600054_27600690_27600816_27601355_27601443_27602462_27602562_27603139_27603308_27607844_27608040_27615167_27615270_27616261_27616325_27617472_27617572_27621152
H1_mix_00052614	chr2	+	577	7	FSM	ENSG00000198522.14	ENST00000436280.5	577	7	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_2	245.841864258759	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACATACGTCAGTAACCTG	-17	True	NA	NA	False	NA	NA	NA	27629023	27638963	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27629170_27629858_27629953_27632632_27632671_27634845_27634925_27635139_27635235_27638209_27638256_27638884
H1_mix_00052615	chr2	+	969	11	FSM	ENSG00000198522.14	ENST00000461249.1	969	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	276.406385599175	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGGATGAGGAAGCAGA	205	False	NA	NA	False	NA	NA	NA	27629245	27647894	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27629443_27629858_27629953_27632632_27632671_27634845_27634925_27635139_27635235_27638209_27638256_27638884_27639032_27640042_27640126_27641239_27641280_27642428_27642520_27647835
H1_mix_00052616	chr2	+	339	2	ISM	ENSG00000289326.1	ENST00000688727.1	652	3	-68	3048	-68	-3034	5prime_fragment	FALSE	canonical	3	9	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGAGCAAGCAAACATTT	NA	False	NA	NA	False	NA	NA	NA	27752762	27754714	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_27752948_27754560
H1_mix_00052618	chr2	+	352	1	FSM	ENSG00000265321.1	ENST00000584745.1	83	1	-306	37	-306	-37	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTAAACAATTCTAAGTGC	NA	False	NA	NA	False	NA	NA	NA	27996060	27996412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27996100_27996400
H1_mix_00052619	chr2	+	743	5	FSM	ENSG00000213639.10	ENST00000455580.5	721	5	-22	0	-22	0	multi-exon	FALSE	canonical	2	17	junction_1	339.659020195254	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGTAGAGAGAAGTTT	16	False	NA	NA	False	NA	NA	NA	28751617	28783978	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_28751821_28776850_28776983_28778808_28779040_28781737_28781843_28783906
H1_mix_00052620	chr2	+	570	4	FSM	ENSG00000213639.10	ENST00000420282.5	570	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	361.946896043543	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTAGCATCAATCGCAT	0	True	NA	NA	False	NA	NA	NA	28751675	28778999	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_28751784_28752037_28752177_28776850_28776983_28778808
H1_mix_00052622	chr2	+	3527	9	FSM	ENSG00000213639.10	ENST00000296122.10	3527	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	251.423323301558	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGATTCTGTAATTCC	-19	True	NA	16	True	AATAAA	-21	NA	28751813	28801648	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_28751925_28752037_28752177_28776850_28776983_28778808_28779040_28781737_28781843_28783906_28783979_28788657_28788810_28793862_28793998_28799198
H1_mix_00052625	chr2	+	291	3	ISM	ENSG00000115295.21	ENST00000693482.1	3198	5	614	16251	614	-323	5prime_fragment	FALSE	canonical	2	7	junction_2	3.5	419	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACTACACAGTTTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	29160365	29167540	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_29160468_29163830_29163955_29167475
H1_mix_00052628	chr2	+	1711	3	FSM	ENSG00000213626.13	ENST00000467242.1	1689	3	-22	0	-18	0	multi-exon	FALSE	canonical	3	12	junction_1	129	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAAAATACATGTTT	422	False	NA	NA	False	AAGAAA	-14	NA	30232134	30258040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_30233135_30234404_30234508_30257432
H1_mix_00052629	chr2	+	920	5	NIC	ENSG00000172954.14	novel	2774	7	NA	NA	0	186	combination_of_known_junctions	FALSE	canonical	2	13	junction_4	56.1382222732427	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTGTTACTTAACTCCC	10	True	NA	NA	False	AATAAA	-24	NA	30447245	30552735	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_30447384_30459551_30459723_30525586_30525756_30533115_30533315_30552492
H1_mix_00052635	chr2	+	4737	13	NIC	ENSG00000152683.14	novel	5089	14	NA	NA	5	-13	combination_of_known_junctions	FALSE	canonical	3	26	junction_8	32.7366384957283	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGGAGTTTCCTCTCTG	9	False	NA	13	True	ATTAAA	-20	NA	32165873	32224086	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_32165904_32171286_32171374_32174062_32174148_32175318_32175362_32184272_32184339_32192335_32192417_32192917_32192954_32193888_32193984_32197706_32197827_32204589_32204693_32206885_32206934_32209492_32209562_32220212
H1_mix_00052636	chr2	+	2330	1	ISM	ENSG00000119820.11	ENST00000238831.9	11955	6	31504	4857	7965	4375	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTAATATTTGCCACTGA	NA	False	NA	16	True	AATAAA	-13	NA	32309407	32311737	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_32309400_32311700
H1_mix_00052637	chr2	+	15752	73	NNC	ENSG00000115760.15	novel	15687	74	NA	NA	-1151	0	at_least_one_novel_splicesite	TRUE	canonical	3	17	junction_13	35.4414836798927	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAGTAAGCCTCTCTAAC	NA	False	NA	NA	False	NA	NA	NA	32355871	32611581	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_32357487_32377587_32377770_32380152_32380291_32388749_32388944_32392038_32392151_32395510_32395594_32401162_32401386_32401462_32401624_32406498_32406558_32414768_32416164_32429145_32429296_32430864_32431091_32433643_32433805_32435453_32435586_32436052_32436185_32439507_32439687_32441328_32441463_32442064_32442227_32442323_32442456_32443490_32443589_32445520_32445669_32448794_32448929_32453807_32453943_32463193_32463382_32464508_32464824_32465064_32465165_32467524_32467740_32467902_32468112_32468436_32468784_32469394_32469615_32470167_32470302_32471013_32471152_32473111_32473240_32476212_32476345_32477367_32477584_32478634_32478819_32479461_32479618_32481319_32481454_32482428_32482583_32485642_32485760_32487646_32487802_32488587_32488715_32490040_32490152_32491424_32491559_32493539_32493668_32499546_32500110_32501712_32501889_32502794_32502892_32503041_32503237_32505004_32505206_32507979_32508260_32509737_32509995_32510525_32510635_32512932_32513155_32514989_32515771_32518253_32518398_32518816_32518947_32524887_32525020_32525463_32525629_32529650_32529825_32531354_32531552_32543240_32543542_32545642_32545861_32547849_32548015_32549312_32549482_32575155_32575367_32593914_32594061_32595033_32595145_32597750_32597969_32599738_32599901_32603005_32603084_32607454_32607644_32611447
H1_mix_00052641	chr2	+	1962	1	FSM	ENSG00000276334.1	ENST00000610331.1	1621	1	-252	-89	-252	89	mono-exon	FALSE	NA	NA	NA	NA	NA	456	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACTTTCATATACTAAAAA	NA	False	NA	NA	False	TATAAA	-7	NA	32521674	32523636	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_32521700_32523600
H1_mix_00052643	chr2	+	6828	33	NIC	ENSG00000049323.16	novel	6502	34	NA	NA	-498	-1	combination_of_known_splicesites	FALSE	canonical	3	18	junction_4	25.6028677287819	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGTTTCCCCTAACAT	NA	False	NA	33	True	ATTAAA	-23	NA	32946454	33399505	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_32947819_32948874_32948946_33020908_33021207_33110581_33110752_33186855_33187081_33188576_33188852_33217551_33217655_33222079_33222152_33243661_33243785_33252676_33252845_33257283_33257512_33259587_33259611_33262721_33262822_33263293_33263393_33273655_33273782_33274964_33275091_33275800_33275924_33280038_33280159_33293159_33293283_33300450_33300574_33301521_33301645_33309433_33309557_33315143_33315270_33342837_33342964_33347366_33347511_33360596_33360780_33361428_33361516_33363389_33363519_33364215_33364357_33365332_33365504_33389183_33389307_33397132_33397283_33398363
H1_mix_00052644	chr2	+	6195	33	NIC	ENSG00000049323.16	novel	6502	34	NA	NA	12	-7	combination_of_known_junctions	FALSE	canonical	3	43	junction_24	21.7182778725662	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGCTAAATTGTTTCCCC	11	False	NA	27	True	ATTAAA	-17	NA	32946964	33399499	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_32947819_32948874_32948946_33020908_33021207_33110581_33110752_33134792_33134961_33186855_33187081_33188576_33188852_33217551_33217655_33222079_33222152_33243661_33243785_33252676_33252845_33257442_33257512_33259587_33259611_33262721_33262822_33263293_33263393_33273655_33273782_33274964_33275091_33275800_33275924_33280038_33280159_33293159_33293283_33300450_33300574_33301521_33301645_33309433_33309557_33315143_33315270_33347366_33347511_33360596_33360780_33361428_33361516_33363389_33363519_33364215_33364357_33365332_33365504_33389183_33389307_33397132_33397283_33398363
H1_mix_00052646	chr2	+	713	7	FSM	ENSG00000049323.16	ENST00000413303.5	713	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	36.4710692040813	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACCAGTGAGATATACCTG	NA	False	NA	NA	False	NA	NA	NA	33243661	33273711	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_33243785_33252676_33252845_33257367_33257512_33259587_33259611_33262721_33262822_33263293_33263393_33273655
H1_mix_00052649	chr2	+	3739	3	Intergenic	novelGene_670	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1.5	323	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCCAGATGAGAGTAAACA	NA	False	NA	NA	False	NA	NA	NA	35436935	35720150	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_35440443_35607760_35607877_35720034
H1_mix_00052650	chr2	+	3579	7	FSM	ENSG00000152133.16	ENST00000281932.6	3570	7	-9	0	-9	0	multi-exon	FALSE	canonical	3	10	junction_2	13.3873904186821	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTAAACATTTAATTGT	-17	True	NA	44	True	AATAAA	-19	NA	37084508	37099244	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_37084571_37088368_37088441_37091915_37092037_37092164_37092256_37094081_37094196_37095436_37095519_37096207
H1_mix_00052652	chr2	+	214	1	FSM	ENSG00000224891.1	ENST00000412776.1	775	1	-116	677	-116	-677	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCAAATGACATGCTTTT	NA	False	NA	NA	False	NA	NA	NA	37148413	37148627	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_37148400_37148600
H1_mix_00052653	chr2	+	810	3	FSM	ENSG00000218739.10	ENST00000470216.1	800	3	-10	0	-4	0	multi-exon	FALSE	canonical	3	153	junction_1	25.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTTGAACAGCAAAAATTAG	-6	True	NA	NA	False	AAAACA	-2	NA	37196483	37201704	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_37196521_37199703_37199820_37201047
H1_mix_00052655	chr2	+	3771	1	FSM	ENSG00000272054.1	ENST00000606229.1	3803	1	106	-74	106	74	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGCTTGTAATTCCAGC	6726	False	NA	NA	False	NA	NA	NA	37208980	37212751	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_37209000_37212800
H1_mix_00052657	chr2	+	2985	9	FSM	ENSG00000003509.16	ENST00000474154.5	2974	9	-11	0	-6	0	multi-exon	FALSE	canonical	3	16	junction_5	131.176348382626	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTAGTGTACACTGGTT	-25	True	NA	NA	False	AATAAA	-25	NA	37231651	37249160	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_37231761_37232105_37232267_37236095_37236177_37237756_37237868_37241577_37242694_37243910_37243974_37246051_37246196_37247455_37247630_37248134
H1_mix_00052658	chr2	+	1966	9	NIC	ENSG00000003509.16	novel	2974	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_5	127.618572316101	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTAGTGTACACTGGTT	-14	True	NA	NA	False	AATAAA	-25	NA	37231662	37249160	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_37231761_37232105_37232267_37236095_37236177_37237756_37237868_37241577_37241638_37243862_37243974_37246051_37246196_37247455_37247630_37248134
H1_mix_00052660	chr2	+	1257	11	NIC	ENSG00000003509.16	novel	2184	10	NA	NA	27	-267	combination_of_known_junctions	FALSE	canonical	3	43	junction_4	153.612662238502	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAAATGAAATCCTTCCT	39	True	NA	NA	False	NA	NA	NA	37231715	37253136	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_37231761_37232105_37232267_37236095_37236177_37237756_37237836_37241577_37241638_37242634_37242694_37243862_37243974_37246051_37246196_37247455_37247630_37248134_37248427_37253085
H1_mix_00052663	chr2	+	661	3	FSM	ENSG00000003509.16	ENST00000441905.1	661	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	34	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTTTTTGTTTTGTGTT	NA	False	NA	5	True	AAGAAA	-15	NA	37247455	37253403	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_37247630_37248257_37248427_37253085
H1_mix_00052664	chr2	+	756	4	FSM	ENSG00000115828.17	ENST00000469098.1	852	4	96	0	96	0	multi-exon	FALSE	canonical	3	109	junction_1	6.94422221866655	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTACAGATTGAAAAAGAGG	638	False	NA	NA	False	NA	NA	NA	37367218	37373030	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_37367409_37369684_37369785_37372355_37372473_37372681
H1_mix_00052665	chr2	+	335	1	FSM	ENSG00000225402.1	ENST00000456500.1	1047	1	457	255	457	-255	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATTCACTGTGTGAGATT	NA	False	NA	NA	False	NA	NA	NA	37817371	37817706	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_37817400_37817700
H1_mix_00052666	chr2	+	597	4	FSM	ENSG00000143891.17	ENST00000427858.4	597	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	89.095454429505	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTACCCCGGAGAGTTAAA	-15	True	NA	NA	False	NA	NA	NA	38666080	38681348	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_38666352_38675911_38676067_38680059_38680162_38681279
H1_mix_00052668	chr2	+	514	2	FSM	ENSG00000231312.8	ENST00000366187.2	523	2	0	9	0	-9	multi-exon	FALSE	canonical	3	67	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCGACTGAGCGAGACTCC	NA	False	NA	NA	False	NA	NA	NA	39453838	39454717	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_39453932_39454296
H1_mix_00052670	chr2	+	1437	4	NIC	ENSG00000152154.11	novel	569	3	NA	NA	196	60	intron_retention	FALSE	canonical	2	6	junction_1	15.5777619273972	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGAAAACTCTGTTGTTT	20	False	NA	79	True	NA	NA	NA	39665177	39718023	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_39665349_39704080_39704195_39707048_39707187_39717009
H1_mix_00052671	chr2	+	1063	2	NIC	ENSG00000152154.11	novel	1664	4	NA	NA	299	0	intron_retention	FALSE	canonical	1	7	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTGTTTTCCTATG	30	False	NA	19	True	ATTAAA	-19	NA	39666265	39717963	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_39666375_39717009
H1_mix_00052672	chr2	+	1259	2	FSM	ENSG00000162878.13	ENST00000485578.1	563	2	-588	-108	-30	108	multi-exon	FALSE	canonical	3	375	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACTGCAGGAGGGCCA	NA	False	NA	NA	False	GGGGCT	-40	NA	42047990	42053649	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_42048839_42053238
H1_mix_00052675	chr2	+	5386	17	FSM	ENSG00000057935.14	ENST00000406652.5	5484	17	97	1	-26	0	multi-exon	FALSE	canonical	3	46	junction_14	665.053143435733	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTTTATGCTGTTCT	31	False	NA	15	True	AATAAA	-15	NA	42568141	42756946	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_42568227_42570436_42570505_42579106_42579201_42609457_42609585_42640172_42640237_42644126_42644245_42656199_42656303_42659762_42659863_42682400_42682590_42695764_42695840_42697775_42697835_42704196_42704319_42707902_42708055_42708873_42709097_42718987_42719075_42722888_42723036_42753373
H1_mix_00052679	chr2	+	2523	1	FSM	ENSG00000200550.1	ENST00000363680.1	108	1	-1424	-991	-1424	991	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATTTTCTATCATAAATA	NA	False	NA	9	True	ATTAAA	-20	NA	42711315	42713838	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_42711300_42713800
H1_mix_00052680	chr2	+	6959	30	FSM	ENSG00000152527.14	ENST00000282406.9	6994	30	35	0	-5	0	multi-exon	TRUE	canonical	2	5	junction_10	11.1022702309311	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGCATTATCTTTTGA	4	True	NA	9	True	AATAAA	-17	NA	43637294	43767987	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_43637380_43644670_43644797_43678862_43678926_43692513_43692664_43694430_43694515_43695142_43695225_43697170_43697357_43699646_43700609_43703980_43704057_43706321_43706417_43707400_43707546_43709989_43710127_43710219_43710331_43710488_43710576_43712224_43712384_43720668_43720750_43726271_43726452_43729636_43729746_43731489_43731603_43738340_43738521_43740945_43741044_43742740_43742919_43743833_43743990_43745865_43745964_43753618_43753761_43757118_43757265_43758899_43759030_43762303_43762391_43764227_43764366_43765412
H1_mix_00052683	chr2	+	368	1	FSM	ENSG00000288707.1	ENST00000684747.1	639	1	361	-90	361	90	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGTGAGAAGTAAAAGAACA	389	False	NA	NA	False	AGTAAA	-12	NA	43996345	43996713	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_43996300_43996700
H1_mix_00052685	chr2	+	202	1	FSM	ENSG00000277809.1	ENST00000615706.1	324	1	-17	139	-17	-139	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCCTGCCAGCCGTGT	1236	False	NA	NA	False	NA	NA	NA	44935567	44935769	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_44935600_44935800
H1_mix_00052686	chr2	+	5132	16	FSM	ENSG00000116016.14	ENST00000263734.5	5155	16	23	0	23	0	multi-exon	FALSE	canonical	0	0	junction_7	1.18133634311129	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGCTGGTGGCTCTTAT	23	False	NA	24	True	ATTAAA	-15	NA	46297429	46386697	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_46297938_46346872_46347064_46356150_46356303_46356723_46356809_46360637_46360757_46360884_46361091_46369826_46369934_46375689_46375838_46376538_46376754_46377893_46378088_46378656_46378768_46380226_46380718_46381595_46381723_46381974_46382090_46382424_46382599_46384508
H1_mix_00052689	chr2	+	4129	19	NIC	ENSG00000068724.17	novel	5095	20	NA	NA	14	-36	combination_of_known_junctions	FALSE	canonical	2	5	junction_15	23.2278701265804	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATATAAATATAGTTTTTT	-6	True	NA	NA	False	NA	NA	NA	46941237	47075288	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_46941726_46950362_46950527_46956838_46957008_46974972_46975104_46978791_46978908_46993449_46993529_46994356_46994515_46995135_46995200_47005921_47006060_47006640_47006725_47011330_47011436_47021861_47021980_47023407_47023466_47024286_47024360_47029223_47029385_47049948_47050047_47051745_47051881_47060768_47060972_47073701
H1_mix_00052691	chr2	+	629	3	FSM	ENSG00000119888.11	ENST00000419334.1	609	3	-20	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	975	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGAAGAACAGACAAGGAC	0	True	NA	NA	False	NA	NA	NA	47369474	47373993	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_47369810_47373462_47373571_47373807
H1_mix_00052692	chr2	+	752	6	FSM	ENSG00000119888.11	ENST00000490733.1	752	6	0	0	0	0	multi-exon	FALSE	canonical	3	2429	junction_2	83.8274418075608	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATGGATTACTTACCTA	4244	False	NA	39	True	NA	NA	NA	47373774	47385210	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_47374049_47375233_47375300_47377013_47377078_47378952_47379055_47379768_47379970_47385165
H1_mix_00052695	chr2	+	7912	12	FSM	ENSG00000116062.18	ENST00000652107.1	7669	12	-193	-50	96	50	multi-exon	FALSE	canonical	2	4	junction_1	622.528037139528	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAATATTTCTTAGGAGTC	NA	False	NA	NA	False	AATAAA	-29	NA	47695625	47810113	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_47696098_47708182_47708431_47737390_47737507_47790926_47791124_47795893_47796064_47798610_47801156_47803419_47803686_47804909_47805028_47805617_47805708_47806203_47806359_47806451_47806652_47806778
H1_mix_00052696	chr2	+	532	4	FSM	ENSG00000116062.18	ENST00000455383.5	578	4	46	0	46	0	multi-exon	FALSE	canonical	1	20	junction_1	423.813113949481	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAGATAAGAGTGAAGAAG	449	False	NA	NA	False	TTTAAA	-39	NA	47783630	47798627	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_47783779_47790926_47791124_47795893_47796064_47798610
H1_mix_00052698	chr2	+	204	1	FSM	ENSG00000236549.1	ENST00000422792.1	455	1	353	-102	353	102	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGTTGGACCAGCCTGGC	NA	False	NA	NA	False	NA	NA	NA	47883807	47884011	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_47883800_47884000
H1_mix_00052699	chr2	+	932	5	FSM	ENSG00000170802.17	ENST00000413569.5	932	5	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_4	5.74456264653803	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACTTCTATAGAACAAG	NA	False	NA	NA	False	NA	NA	NA	48314636	48373328	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_48314815_48346200_48346752_48359046_48359148_48362642_48362708_48373291
H1_mix_00052701	chr2	+	1756	13	FSM	ENSG00000068912.15	ENST00000405123.7	1756	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	142.497051626419	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGATTCCAAAATAAATCTC	22	True	NA	72	True	TATAAA	-28	NA	53787079	53818220	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_53787373_53794344_53794450_53795932_53796014_53797514_53797593_53797731_53797796_53799046_53799082_53801396_53801621_53801712_53801843_53808298_53808461_53809213_53809274_53812948_53813074_53814859_53814936_53817897
H1_mix_00052702	chr2	+	691	3	FSM	ENSG00000170634.13	ENST00000606082.5	713	3	-4	26	-4	-26	multi-exon	FALSE	canonical	3	6	junction_2	40.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAAAGTTTCATGGAGA	54	False	NA	NA	False	NA	NA	NA	53970833	53975350	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_53971322_53973712_53973811_53975245
H1_mix_00052703	chr2	+	515	1	FSM	ENSG00000233266.1	ENST00000437242.1	427	1	9	-97	9	97	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGGCAAAACCCTGCCT	NA	False	NA	NA	False	NA	NA	NA	54051342	54051857	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_54051300_54051900
H1_mix_00052705	chr2	+	2417	1	FSM	ENSG00000237887.1	ENST00000395315.2	459	1	-1915	-43	-1915	43	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTCACCAAAAAAAAAAAA	1056	False	NA	NA	False	AATATA	-9	NA	54527427	54529844	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_54527400_54529800
H1_mix_00052706	chr2	+	589	4	FSM	ENSG00000214595.13	ENST00000488611.1	589	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.24721912892465	245	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTGAGACTAAACAGTATA	660	False	NA	NA	False	TTTAAA	-25	NA	54967031	54970332	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_54967104_54968127_54968282_54968667_54968769_54970070
H1_mix_00052708	chr2	+	2240	1	FSM	ENSG00000162997.15	ENST00000563365.1	2154	1	-121	35	-121	0	mono-exon	FALSE	NA	NA	NA	NA	NA	803	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGGCCAATGTTTAGAATA	NA	False	NA	-30	True	GATAAA	-10	NA	55282197	55284437	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_55282200_55284400
H1_mix_00052709	chr2	+	568	5	FSM	ENSG00000233723.10	ENST00000429095.5	545	5	-23	0	14	0	multi-exon	FALSE	canonical	0	0	junction_2	12.6367519561001	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGGTCTTCAGATCTTT	612	False	NA	NA	False	NA	NA	NA	58428314	58925701	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_58428465_58461777_58461846_58850429_58850607_58924544_58924627_58925610
H1_mix_00052710	chr2	+	3033	12	FSM	ENSG00000233723.10	ENST00000452840.5	4077	12	-23	1067	14	1046	multi-exon	FALSE	canonical	0	0	junction_6	13.7912416811336	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTATCTGGCCCTGCCCT	612	False	NA	NA	False	NA	NA	NA	58428314	59062699	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_58428465_58461777_58461846_58656649_58656712_58850429_58850607_58924544_58924627_58925610_58925910_59003948_59004028_59014329_59014399_59019628_59019692_59022955_59022983_59058560_59058597_59060778
H1_mix_00052711	chr2	+	4386	2	Antisense	novelGene_ENSG00000228590.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	90	junction_1	0	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGACCTGTCTCAGATAC	2758	False	NA	17	True	AATAAA	-31	NA	60417732	60426257	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_+_60420153_60424291
H1_mix_00052712	chr2	+	9784	1	FSM	ENSG00000267520.2	ENST00000589496.2	5702	1	-4089	7	-4089	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAAAACACTTGCTGAAAT	3442	False	NA	7	True	AATAAA	-10	NA	60921819	60931603	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_60921800_60931600
H1_mix_00052713	chr2	+	1538	2	FSM	ENSG00000162928.9	ENST00000444100.2	1533	2	-5	0	-5	0	multi-exon	FALSE	canonical	2	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATTCTTCTTTATAGTGG	NA	False	NA	6	True	AATAAA	-16	NA	61017219	61019067	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_61017852_61018161
H1_mix_00052714	chr2	+	3530	5	NNC	ENSG00000162928.9	novel	4472	4	NA	NA	-5	-30	intron_retention	FALSE	non_canonical	0	0	junction_4	53.5274462308823	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTGGAGAAATAAAAATATG	NA	False	NA	-24	True	NA	NA	NA	61017219	61051960	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_61017852_61031418_61032114_61045725_61045852_61048471_61049490_61050901
H1_mix_00052715	chr2	+	1024	2	FSM	ENSG00000162928.9	ENST00000414712.2	1014	2	-10	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTGGTGACTATTGTCCT	-1	True	NA	19	True	AATAAA	-29	NA	61017719	61019080	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_61017852_61018188
H1_mix_00052719	chr2	+	773	3	FSM	ENSG00000237651.8	ENST00000464909.2	726	3	-11	-36	-11	17	multi-exon	FALSE	canonical	3	7	junction_1	95.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTCAAGGGGGATTTTTT	-18	True	NA	34	True	AATAAA	-38	NA	61145096	61164845	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_61145197_61163051_61163233_61164353
H1_mix_00052725	chr2	+	2813	7	FSM	ENSG00000173209.23	ENST00000642732.1	2813	7	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	150.876329046894	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAGCAATCAATCAATCAG	191	False	NA	-49	True	AATGAA	-34	NA	61177701	61187499	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_61179172_61181319_61181406_61183546_61183663_61184711_61184801_61185501_61185619_61186445_61186498_61186616
H1_mix_00052727	chr2	+	1719	1	FSM	ENSG00000270820.7	ENST00000605437.1	569	1	-986	-164	-986	-25	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAAAATAAGTGGTGGAAA	NA	False	NA	NA	False	AAAAAG	-33	NA	61482386	61484105	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_61482400_61484100
H1_mix_00052728	chr2	+	1110	1	FSM	ENSG00000242735.1	ENST00000442699.1	741	1	-144	-225	-144	225	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAAGAAGGCAGTGTTAT	NA	False	NA	NA	False	AAAAAG	-43	NA	62146268	62147378	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_62146300_62147400
H1_mix_00052729	chr2	+	4994	23	NIC	ENSG00000115504.15	novel	5105	23	NA	NA	-45	0	intron_retention	FALSE	canonical	3	7	junction_14	27.1264638558422	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGCTGCTACTTTCTTGC	37	False	NA	15	True	AATAAA	-24	NA	62705820	63046487	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_62706053_62706896_62707296_62747394_62747453_62764265_62764362_62771338_62771393_62826086_62826269_62831018_62831159_62859168_62859292_62864730_62864972_62874345_62874533_62942717_62942897_62943801_62943851_62948259_62949163_62955516_62955661_62979190_62979336_62990715_62990841_62993529_62993669_62993870_62993978_62996642_62996767_63037534_63037635_63038742_63038817_63045065_63045181_63045409
H1_mix_00052735	chr2	+	1346	8	FSM	ENSG00000014641.21	ENST00000421012.2	1346	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	2589.31147573392	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGACTCAGACTCTGTT	6	True	NA	13	True	AATAAA	-15	NA	63589150	63607194	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_63589385_63594487_63594587_63597398_63597575_63599169_63599293_63604695_63604873_63605279_63605394_63605938_63606029_63606861
H1_mix_00052737	chr2	+	428	1	FSM	ENSG00000234488.1	ENST00000411843.1	406	1	-22	0	-22	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGATGCTTTGTTTTGGT	13	False	NA	NA	False	NA	NA	NA	63684282	63684710	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_63684300_63684700
H1_mix_00052738	chr2	+	743	5	FSM	ENSG00000169764.16	ENST00000497510.5	722	5	-21	0	-2	0	multi-exon	FALSE	canonical	3	12	junction_3	1602.47035854021	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAGGAATGAGAATACC	-13	True	NA	NA	False	NA	NA	NA	63840949	63882601	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_63841233_63856305_63856434_63857828_63857937_63862840_63862929_63882465
H1_mix_00052743	chr2	+	2297	6	NNC	ENSG00000225889.10	novel	1588	5	NA	NA	-5	0	intron_retention	FALSE	canonical	3	20	junction_2	60.8124987153134	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	16	True	ATTAAA	-21	NA	64228384	64257610	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_64228523_64229496_64229641_64251118_64251984_64252419_64253044_64254979_64255082_64257186
H1_mix_00052744	chr2	+	4402	5	NNC	ENSG00000225889.10	novel	1619	5	NA	NA	-5	0	intron_retention	FALSE	canonical	3	20	junction_2	56.6700979353309	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	16	True	ATTAAA	-21	NA	64228384	64257610	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_64228523_64229496_64229641_64251118_64251984_64252419_64253044_64254979
H1_mix_00052745	chr2	+	4421	6	NNC	ENSG00000225889.10	novel	1423	5	NA	NA	-5	3895	intron_retention	FALSE	canonical	3	16	junction_3	38.4364410423234	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAATTTTGGCTGAATTGA	NA	False	NA	14	True	AATAAA	-25	NA	64228384	64261505	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_64228523_64229496_64229641_64251118_64251835_64252419_64255082_64260227_64260350_64260866
H1_mix_00052747	chr2	+	8765	2	Intergenic	novelGene_685	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	158	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAATCAAAGAGGCTTT	NA	False	NA	40	True	NA	NA	NA	66244243	66254810	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_66244485_66246286
H1_mix_00052749	chr2	+	2616	11	FSM	ENSG00000143995.20	ENST00000398506.6	3530	11	344	570	344	0	multi-exon	FALSE	canonical	0	0	junction_2	2.0591260281974	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGACTCCACTGCTTGAA	1967	False	NA	NA	False	AATAAA	-20	NA	66437736	66572759	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_66437964_66439842_66439985_66440561_66440613_66441413_66441465_66442901_66443049_66464108_66464221_66512148_66512295_66547942_66548020_66567452_66567512_66568666_66568757_66571245
H1_mix_00052750	chr2	+	3856	3	NNC	ENSG00000289533.1	novel	821	3	NA	NA	-68	-6212	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_2	708	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGAAACAAACACCAGTC	NA	False	NA	-13	True	NA	NA	NA	67331812	67340416	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_67332063_67333952_67334151_67337008
H1_mix_00052751	chr2	+	3864	2	Intergenic	novelGene_687	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	88	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTTTGAATTTTTTCCT	2494	False	NA	12	True	AATAAA	-16	NA	67334471	67339971	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_67337698_67339333
H1_mix_00052753	chr2	+	339	1	FSM	ENSG00000273064.1	ENST00000608069.1	979	1	-75	715	-75	-715	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATCTGTAATATGAATTGG	1193	False	NA	NA	False	NA	NA	NA	68252794	68253133	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_68252800_68253100
H1_mix_00052754	chr2	+	4088	3	ISM	ENSG00000169621.10	ENST00000627740.1	2180	6	58968	-2484	0	2484	3prime_fragment	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATCGTATGATTTGTGAG	NA	False	NA	115	True	NA	NA	NA	68645821	68658346	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_68646307_68649474_68649611_68654879
H1_mix_00052755	chr2	+	564	4	FSM	ENSG00000163219.12	ENST00000491237.5	582	4	0	18	0	-18	multi-exon	FALSE	canonical	1	3	junction_1	0.471404520791032	451	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCGCCACAAACCCAGAAGA	NA	False	NA	NA	False	NA	NA	NA	68679961	68782268	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_68680096_68710504_68710699_68775220_68775421_68782232
H1_mix_00052760	chr2	+	297	1	FSM	ENSG00000228034.1	ENST00000447764.1	270	1	74	-101	74	101	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTTAAAGCTATTATGT	NA	False	NA	29	True	TATAAA	-24	NA	70803230	70803527	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_70803200_70803500
H1_mix_00052762	chr2	+	2988	9	FSM	ENSG00000124357.13	ENST00000475709.5	2986	9	-2	0	0	0	multi-exon	FALSE	canonical	3	227	junction_1	15.8034806292791	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAATTGGACTGCATTATC	0	True	NA	17	True	AATAAA	-17	NA	71068647	71078636	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_71070587_71070740_71070840_71071685_71071828_71072640_71072752_71073481_71073595_71075554_71075643_71076603_71076702_71077557_71077637_71078317
H1_mix_00052770	chr2	+	3147	9	NNC	ENSG00000075292.19	novel	2076	7	NA	NA	-1198	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	196.97699738802	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTGTGTTTGTGGCTGA	NA	False	NA	NA	False	AATAAA	-25	NA	71417023	71435058	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_71417244_71418601_71418640_71422813_71424039_71424649_71424716_71426459_71427415_71428546_71428652_71431326_71431429_71433164_71433284_71434741
H1_mix_00052774	chr2	+	6727	55	FSM	ENSG00000135636.15	ENST00000409762.5	6727	55	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	8.25967446224258	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGCTAACATGGAGCTCT	50	False	NA	NA	False	NA	NA	NA	71453721	71686648	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_71454087_71480882_71480939_71481878_71481971_71503213_71503320_71511806_71511922_71513239_71513333_71513715_71513922_71515622_71515752_71516179_71516243_71516988_71517040_71520177_71520209_71520788_71520905_71526219_71526347_71528297_71528402_71535020_71535090_71535267_71535312_71539156_71539240_71551040_71551157_71551606_71551721_71553010_71553189_71553806_71553932_71555964_71556072_71561751_71561945_71564057_71564214_71567950_71568083_71568171_71568339_71569819_71569935_71570228_71570335_71570598_71570742_71574197_71574372_71589592_71589687_71590210_71590289_71598563_71598746_71600701_71600843_71601498_71601529_71602775_71602806_71611244_71611347_71611464_71611627_71612640_71612807_71613333_71613411_71643964_71644064_71656161_71656291_71658877_71659034_71660559_71660652_71664267_71664439_71665161_71665305_71667375_71667516_71668753_71668843_71669111_71669208_71669604_71669747_71674196_71674297_71679056_71679236_71681000_71681111_71682529_71682678_71686453
H1_mix_00052775	chr2	+	420	1	FSM	ENSG00000272702.1	ENST00000610134.1	2744	1	47	2277	47	0	mono-exon	FALSE	NA	NA	NA	NA	NA	982	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATATTTAAGTGTTCACT	206	False	NA	5	True	AATAAA	-13	NA	73113210	73113630	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73113200_73113600
H1_mix_00052776	chr2	+	660	5	FSM	ENSG00000135632.12	ENST00000413491.5	660	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	107.229601789804	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTGGCCACAGTGAAGCA	NA	False	NA	NA	False	NA	NA	NA	73214221	73221213	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73214363_73218860_73218970_73219951_73220191_73220660_73220783_73221164
H1_mix_00052780	chr2	+	1825	12	NNC	ENSG00000135624.17	novel	1847	12	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	2	35	junction_4	1030.03248765262	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATAACTTTGTAAATTATT	16	True	NA	24	True	AATAAA	-13	NA	73234324	73253004	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_73234385_73239642_73239797_73240436_73240544_73243003_73243130_73244000_73244050_73244543_73244716_73247761_73247927_73248990_73249180_73249818_73249917_73250305_73250439_73251225_73251433_73252639
H1_mix_00052781	chr2	+	9692	15	FSM	ENSG00000116127.20	ENST00000684460.1	9692	15	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	34.2327716240042	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAACTTTAGATTAAC	1348	False	NA	37	True	NA	NA	NA	73449456	73609897	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73454068_73455161_73455296_73489633_73491499_73519774_73520017_73534823_73534950_73557219_73557355_73558971_73559143_73572261_73573425_73599400_73599522_73600677_73600882_73601194_73601437_73602184_73602369_73603240_73603305_73608474_73608575_73609567
H1_mix_00052782	chr2	+	3258	2	FSM	ENSG00000116127.20	ENST00000684197.1	3258	2	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCTATTTTCAAATGTTT	3450	False	NA	NA	False	ACTAAA	-40	NA	73451558	73455910	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73454068_73455161
H1_mix_00052783	chr2	+	6874	16	FSM	ENSG00000116127.20	ENST00000684590.1	6874	16	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	35.5787701992198	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACTCATAGTAAACAATTC	4302	False	NA	53	True	AATAAA	-11	NA	73452410	73609913	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73454068_73455212_73455296_73489633_73491499_73519774_73520017_73534823_73534950_73550266_73550438_73557219_73557355_73558971_73559143_73572261_73573425_73599400_73599522_73600677_73600882_73601194_73601437_73602184_73602369_73603240_73603305_73608474_73608575_73609567
H1_mix_00052784	chr2	+	1960	11	FSM	ENSG00000124356.17	ENST00000683349.1	1969	11	9	0	-3	0	multi-exon	FALSE	canonical	2	9	junction_9	169.259593524267	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTGTCAGGAATTATT	NA	False	NA	-51	True	NA	NA	NA	73828926	73862806	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73828997_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73860533_73860590_73862202
H1_mix_00052785	chr2	+	1906	12	FSM	ENSG00000124356.17	ENST00000684095.1	1915	12	9	0	-3	0	multi-exon	FALSE	canonical	3	5	junction_10	164.406571222555	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAATAAGAAAGAATATTCC	NA	False	NA	NA	False	ATTAAA	-11	NA	73828926	73873645	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73828997_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202_73862305_73870142_73870353_73873351
H1_mix_00052788	chr2	+	2654	11	FSM	ENSG00000124356.17	ENST00000684703.1	2632	11	-22	0	0	0	multi-exon	FALSE	canonical	2	9	junction_9	171.569490294749	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTAACTTATGTTTTTG	-13	True	NA	15	True	AATAAA	-34	NA	73828960	73862872	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73829511_73830844_73831060_73844812_73845037_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73860533_73860590_73862202
H1_mix_00052797	chr2	+	1189	8	FSM	ENSG00000163017.14	ENST00000409731.7	1413	8	12	212	-3	-22	multi-exon	FALSE	canonical	1	2	junction_2	14.7731140237657	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTCTGTGTGGGGCTCTT	NA	False	NA	14	True	ATTAAA	-15	NA	73892978	73919653	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73893052_73901275_73901438_73908672_73908784_73909054_73909140_73913484_73913647_73914679_73914872_73916583_73916766_73919431
H1_mix_00052799	chr2	+	685	4	NNC	ENSG00000114956.20	novel	703	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_2	896.607804759448	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTTTTTCTAATTCAG	-6	True	NA	17	True	AATAAA	-15	NA	73926874	73958946	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_73927053_73946718_73946889_73958145_73958246_73958709
H1_mix_00052801	chr2	+	482	3	NIC	ENSG00000114956.20	novel	703	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	395	junction_1	910.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTTTTTCTAATTCAG	-15	True	NA	17	True	AATAAA	-15	NA	73926907	73958946	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_73927053_73958145_73958246_73958709
H1_mix_00052802	chr2	+	11986	11	ISM	ENSG00000187605.16	ENST00000409262.8	12060	12	896	0	-720	0	3prime_fragment	FALSE	canonical	2	7	junction_1	3.54964786985977	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGTGTGGGTTCTCTTTT	841	False	NA	39	True	AATAAA	-27	NA	73985805	74108176	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_73986707_74003109_74003167_74046277_74048412_74073548_74073640_74080497_74080592_74087829_74088039_74089896_74090048_74092901_74092992_74093528_74093667_74099275_74099613_74100392
H1_mix_00052805	chr2	+	563	4	FSM	ENSG00000005448.17	ENST00000493982.5	563	4	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_1	72.5549600111682	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGCCACTTCATCTGTG	-15	True	NA	NA	False	NA	NA	NA	74421729	74423508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_74421817_74422152_74422376_74422869_74422933_74423318
H1_mix_00052806	chr2	+	861	9	FSM	ENSG00000005448.17	ENST00000409791.5	854	9	-7	0	-7	0	multi-exon	FALSE	canonical	3	26	junction_1	232.599676214306	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTTGTCTGATTACTCA	-23	True	NA	26	True	CATAAA	-16	NA	74421721	74425754	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_74421817_74422869_74422933_74423318_74423386_74423477_74423532_74423854_74423983_74424874_74424976_74425074_74425238_74425416_74425492_74425639
H1_mix_00052807	chr2	+	2063	4	FSM	ENSG00000239779.7	ENST00000484744.5	2047	4	-21	5	0	-3	multi-exon	FALSE	canonical	3	8	junction_1	294.822357059675	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTACTTGTGGATTTGG	-6	True	NA	11	True	ATTAAA	-11	NA	74458437	74460878	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_74459563_74459642_74459746_74459872_74460050_74460220
H1_mix_00052811	chr2	+	2815	12	FSM	ENSG00000115282.21	ENST00000424122.5	2806	12	-9	0	0	0	multi-exon	TRUE	canonical	3	15	junction_2	42.0764750432604	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCCTACATAGTCATGCT	-6	True	NA	10	True	AATAAA	-18	NA	74483072	74494559	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_74483136_74483321_74483411_74490243_74490474_74490655_74490740_74491127_74491185_74491294_74491376_74491480_74491667_74492003_74492056_74492138_74492230_74492303_74492446_74492645_74492748_74492921
H1_mix_00052812	chr2	+	3372	10	FSM	ENSG00000115282.21	ENST00000410003.5	3358	10	-14	0	0	0	multi-exon	FALSE	canonical	3	64	junction_8	30.0850645854569	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCCTACATAGTCATGCT	-6	True	NA	10	True	AATAAA	-18	NA	74483072	74494559	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_74483136_74483321_74483411_74490024_74490128_74490243_74490474_74490655_74490740_74491127_74491185_74491294_74491376_74491480_74491673_74492003_74492056_74492138
H1_mix_00052813	chr2	+	4025	7	FSM	ENSG00000115282.21	ENST00000489152.5	4025	7	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_6	35.9753001686188	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCCTACATAGTCATGCT	-6	True	NA	10	True	AATAAA	-18	NA	74483072	74494559	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_74483136_74483321_74483411_74490024_74490128_74490243_74491185_74491294_74491376_74491480_74491673_74492003
H1_mix_00052818	chr2	+	1323	9	FSM	ENSG00000115317.12	ENST00000467961.5	1323	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	55.406311689193	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCCTAAACTTAGGGGAG	-4	True	NA	-65	True	NA	NA	NA	74529774	74533247	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_74529913_74530460_74530513_74530616_74530822_74530910_74531106_74531338_74531372_74531596_74531703_74531855_74531926_74532618_74532715_74532819
H1_mix_00052821	chr2	+	535	4	FSM	ENSG00000115325.14	ENST00000475191.5	535	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	34.7275107083707	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCGCCGAGCGCTGTGGC	13	True	NA	NA	False	NA	NA	NA	74554749	74555926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_74554860_74555155_74555454_74555574_74555669_74555893
H1_mix_00052823	chr2	+	6473	18	FSM	ENSG00000159399.10	ENST00000409174.1	5278	18	-1195	0	-152	0	multi-exon	FALSE	canonical	2	7	junction_1	49.3778595159878	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATTCATGAGTGTTTTT	NA	False	NA	4	True	AATAAA	-27	NA	74833974	74893359	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_74835339_74854292_74854456_74867635_74867785_74872299_74872420_74873275_74873372_74873843_74873944_74874265_74874450_74877165_74877322_74878687_74878922_74880264_74880570_74881710_74881860_74882119_74882240_74885493_74885590_74886293_74886394_74886489_74886674_74887902_74888059_74889244_74889479_74890796
H1_mix_00052826	chr2	+	1047	1	FSM	ENSG00000271452.1	ENST00000604219.1	466	1	-145	-436	-145	436	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTAAAATGTAATGCTTT	NA	False	NA	NA	False	NA	NA	NA	75669843	75670890	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_75669800_75670900
H1_mix_00052827	chr2	+	3932	3	Antisense	novelGene_ENSG00000176204.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	63	junction_2	27.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACCCATCCCCCATTATT	NA	False	NA	NA	False	NA	NA	NA	77088667	77097265	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_+_77088823_77090732_77090901_77093656
H1_mix_00052828	chr2	+	3167	17	FSM	ENSG00000066032.19	ENST00000629316.2	3167	17	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_16	14.203322674642	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATTATGTCGATTTTTA	96	False	NA	NA	False	NA	NA	NA	79513134	80648378	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_79513208_79651551_79651659_79744386_79744583_79858012_79858180_79869815_79869936_79874075_79874343_79909593_79909798_80393210_80393292_80419448_80419602_80544981_80545075_80545906_80546064_80555692_80555894_80574162_80574315_80581705_80581820_80589303_80589486_80604073_80604180_80647584
H1_mix_00052829	chr2	+	588	6	FSM	ENSG00000066032.19	ENST00000409550.2	595	6	7	0	7	0	multi-exon	FALSE	canonical	3	12	junction_1	18.9589029218465	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCCTCCAAGAGGGCGAT	NA	False	NA	NA	False	NA	NA	NA	80328281	80555728	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_80328350_80393210_80393292_80419448_80419602_80544981_80545075_80545906_80546064_80555692
H1_mix_00052830	chr2	+	1001	3	FSM	ENSG00000176407.18	ENST00000428691.5	560	3	-441	0	362	0	multi-exon	FALSE	canonical	2	39	junction_1	375.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGAACATGCAGAAACATC	219	False	NA	NA	False	NA	NA	NA	84971522	85035125	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_84972246_85027888_85028057_85035015
H1_mix_00052832	chr2	+	591	3	FSM	ENSG00000115459.18	ENST00000462396.5	590	3	-1	0	-1	0	multi-exon	FALSE	canonical	3	19	junction_2	5.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCGGATGGCACAAAGGGA	NA	False	NA	NA	False	NA	NA	NA	85354392	85357025	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_85354830_85355075_85355171_85356966
H1_mix_00052833	chr2	+	993	9	FSM	ENSG00000115459.18	ENST00000409331.6	994	9	0	1	0	-1	multi-exon	FALSE	canonical	3	20	junction_1	15.0410895549491	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGGGAGGAGTAGCTC	NA	False	NA	NA	False	NA	NA	NA	85354719	85371562	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_85354830_85355554_85355599_85356966_85357253_85362185_85362261_85363096_85363167_85368685_85368755_85369738_85369831_85371085_85371210_85371439
H1_mix_00052842	chr2	+	664	3	FSM	ENSG00000118640.11	ENST00000432071.1	664	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	354.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAGTGGGTAATAAAGACC	-1	True	NA	-8	True	NA	NA	NA	85561561	85581997	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_85561645_85579008_85579168_85581575
H1_mix_00052845	chr2	+	2163	13	FSM	ENSG00000168883.20	ENST00000459775.5	2148	13	-15	0	-15	0	multi-exon	FALSE	canonical	3	19	junction_3	305.001127047098	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTCTTGTTTTATATC	7092	False	NA	71	True	ATTAAA	-19	NA	85602840	85649280	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_85603082_85619219_85619290_85621484_85621580_85623625_85623783_85625538_85625692_85630720_85630947_85636052_85636131_85637368_85637437_85639202_85639392_85640975_85641119_85644947_85645084_85647929_85648017_85648760
H1_mix_00052849	chr2	+	1028	6	FSM	ENSG00000168883.20	ENST00000490193.5	1028	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	312.251180942523	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATTTTCCTATGGTTCCC	NA	False	NA	-2	True	NA	NA	NA	85636085	85649207	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_85636131_85637368_85637437_85639202_85639392_85640975_85641119_85644947_85645084_85648760
H1_mix_00052852	chr2	+	203	2	FSM	ENSG00000115523.17	ENST00000531685.1	723	2	183	337	-48	-50	multi-exon	FALSE	canonical	0	0	junction_1	0	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGCCAAGGGGCTACAG	-13	True	NA	NA	False	NA	NA	NA	85695319	85696056	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_85695424_85695957
H1_mix_00052861	chr2	+	609	1	FSM	ENSG00000273080.1	ENST00000610262.1	460	1	-92	-57	-92	57	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCAATGCAGAAGCACCG	337	False	NA	63	True	NA	NA	NA	86195497	86196106	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_86195500_86196100
H1_mix_00052862	chr2	+	4600	26	FSM	ENSG00000115548.17	ENST00000409064.5	4621	26	21	0	21	0	multi-exon	FALSE	canonical	0	0	junction_1	24.8655906827085	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCTCAGTTTATTGGC	108	False	NA	15	True	ATTAAA	-15	NA	86441481	86492716	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_86441489_86442017_86442234_86449806_86449963_86451102_86451214_86455084_86455188_86456441_86456567_86456804_86456878_86456982_86457072_86464052_86464217_86466371_86466884_86470203_86470409_86474775_86474991_86477876_86478030_86478169_86478266_86478607_86478736_86480166_86480363_86481929_86482103_86482457_86482695_86483986_86484159_86484941_86485030_86485728_86485860_86489317_86489438_86489519_86489660_86490880_86491058_86491140_86491276_86492038
H1_mix_00052863	chr2	+	318	4	NIC	ENSG00000233673.7	novel	1771	15	NA	NA	205	-15557	combination_of_known_splicesites	TRUE	canonical	1	1	junction_3	39.1606378338703	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTAAATATGGATTGTTGT	NA	False	NA	NA	False	NA	NA	NA	86871505	86879485	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_86871544_86873186_86873349_86878772_86878874_86879468
H1_mix_00052866	chr2	+	1127	10	ISM	ENSG00000204745.4	ENST00000454465.2	3795	31	21379	25461	21379	-25461	internal_fragment	FALSE	canonical	3	101	junction_2	88.9749583302883	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCTGTTTGTCTCTGGGT	NA	False	NA	NA	False	NA	NA	NA	87146576	87171168	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_87146630_87149834_87150107_87156279_87156515_87159562_87159655_87161616_87161752_87161925_87162009_87162949_87163029_87164583_87164659_87170570_87170648_87171142
H1_mix_00052867	chr2	+	1654	11	ISM	ENSG00000204745.4	ENST00000454465.2	3795	31	47714	-337	47714	337	3prime_fragment	FALSE	canonical	0	0	junction_1	152.471505534641	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCCCAAAAATGCCAAGTT	NA	False	NA	NA	False	TTTAAA	-35	NA	87172911	87196966	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_87173106_87177147_87177235_87179988_87180107_87181065_87181144_87181501_87181570_87182958_87183098_87185531_87185619_87187146_87187243_87188859_87189059_87193442_87193578_87196513
H1_mix_00052868	chr2	+	1930	3	NNC	ENSG00000287670.1	novel	851	3	NA	NA	18	1350	at_least_one_novel_splicesite	FALSE	non_canonical	2	7	junction_2	9	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAACTCCTTTAAATTT	NA	False	NA	-16	True	NA	NA	NA	88016797	88022801	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_88016869_88020695_88021450_88021696
H1_mix_00052870	chr2	+	1030	1	FSM	ENSG00000261600.1	ENST00000567067.1	528	1	-544	42	-544	-42	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTCTGTACCATTTA	8478	False	NA	NA	False	NA	NA	NA	91579791	91580821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_91579800_91580800
H1_mix_00052872	chr2	+	508	4	FSM	ENSG00000155066.16	ENST00000478295.1	508	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	2.86744175568088	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGACGACCCCAGCCACCCA	3316	False	NA	NA	False	NA	NA	NA	95277815	95279939	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_95278005_95278720_95278785_95278984_95279145_95279844
H1_mix_00052873	chr2	+	582	3	FSM	ENSG00000155066.16	ENST00000462029.1	574	3	-8	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	0	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACCGTCCTCATCTGGCC	8661	False	NA	NA	False	NA	NA	NA	95288506	95289648	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_95288590_95288932_95289007_95289223
H1_mix_00052875	chr2	+	1362	9	NNC	ENSG00000115042.10	novel	1366	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	124.278668724765	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCTTCAATAAATTCGT	-6	True	NA	-23	True	NA	NA	NA	95402723	95413096	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_95402873_95405279_95405403_95405552_95405804_95406940_95407158_95410526_95410587_95410863_95411027_95412433_95412543_95412676_95412765_95412894
H1_mix_00052876	chr2	+	771	6	NIC	ENSG00000115042.10	novel	1366	9	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	61	junction_1	120.448163124225	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCTTCAATAAATTCGT	-6	True	NA	-23	True	NA	NA	NA	95402723	95413096	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_95402873_95410526_95410587_95410863_95411027_95412433_95412543_95412676_95412765_95412894
H1_mix_00052877	chr2	+	661	5	NIC	ENSG00000115042.10	novel	4775	8	NA	NA	0	37	combination_of_known_splicesites	FALSE	canonical	3	61	junction_1	161.327307049985	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTTCTGCTGTTTGTCT	-22	True	NA	14	True	AATAAA	-23	NA	95402707	95413133	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_95402873_95410526_95410587_95412433_95412543_95412676_95412765_95412894
H1_mix_00052882	chr2	+	1746	6	NIC	ENSG00000231584.9	novel	900	7	NA	NA	113	-10	intron_retention	FALSE	canonical	3	32	junction_1	62.9622108887545	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTCGGTTTCCACAGCAG	3248	False	NA	-8	True	AGTAAA	-5	NA	96013842	96023366	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_96013972_96015108_96015326_96019200_96019701_96021124_96021234_96021367_96021466_96022673
H1_mix_00052887	chr2	+	2711	18	NIC	ENSG00000121152.10	novel	6030	18	NA	NA	-27	23	combination_of_known_junctions	FALSE	canonical	3	22	junction_13	58.6654346101099	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAATATTTGAGTGTCCAC	9524	False	NA	12	True	AATAAA	-21	NA	96335738	96373838	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_96335849_96341641_96341895_96342049_96342141_96342755_96342849_96343165_96343305_96344104_96344230_96351830_96352021_96353305_96353398_96354182_96354389_96359044_96359194_96360142_96360250_96360587_96360711_96364480_96364592_96365968_96366059_96367256_96367374_96368971_96369064_96369424_96369501_96373291
H1_mix_00052888	chr2	+	2694	18	NIC	ENSG00000121152.10	novel	6030	18	NA	NA	11	23	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	53.6124114122788	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAATATTTGAGTGTCCAC	-6	True	NA	12	True	AATAAA	-21	NA	96335776	96373838	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_96335849_96341713_96341895_96342049_96342141_96342755_96342849_96343165_96343305_96344104_96344230_96351830_96352021_96353305_96353398_96354182_96354389_96359044_96359194_96360142_96360250_96360587_96360711_96364480_96364592_96365875_96366059_96367256_96367374_96368971_96369064_96369424_96369501_96373291
H1_mix_00052891	chr2	+	2370	15	NIC	ENSG00000121152.10	novel	6030	18	NA	NA	-2	23	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	65.1684238676044	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAATATTTGAGTGTCCAC	33	False	NA	12	True	AATAAA	-21	NA	96335815	96373838	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_96335849_96341641_96341895_96342049_96342141_96351830_96352021_96353305_96353398_96354182_96354389_96359044_96359194_96360142_96360250_96360587_96360711_96364480_96364592_96365875_96366059_96367256_96367374_96368971_96369064_96369424_96369501_96373291
H1_mix_00052896	chr2	+	766	4	FSM	ENSG00000168763.16	ENST00000480035.1	396	4	-370	0	-370	0	multi-exon	FALSE	canonical	2	10	junction_2	109.368896655107	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCCCGGTGGAAGGCAGCC	1212	False	NA	NA	False	NA	NA	NA	96828195	96832573	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_96828701_96828995_96829135_96831968_96832069_96832551
H1_mix_00052897	chr2	+	456	8	NIC	ENSG00000135976.21	novel	6024	75	NA	NA	-27459	-55997	combination_of_known_splicesites	FALSE	canonical	3	12	junction_7	5.09100848034442	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATTTTGAAAAGAGATTT	NA	False	NA	NA	False	AAAACA	-25	NA	97185267	97193053	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_97185345_97185437_97185511_97187197_97187227_97187328_97187402_97190977_97191007_97191108_97191182_97192857_97192887_97192980
H1_mix_00052899	chr2	+	3541	8	ISM	ENSG00000135976.21	ENST00000652721.1	7623	76	127802	-287	-4580	287	3prime_fragment	FALSE	canonical	3	23	junction_7	17.9818502600681	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATGTCTGATGAAAATT	0	True	NA	NA	False	ATTAAA	-18	NA	97241019	97252407	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_97241480_97243845_97244030_97245156_97246072_97247475_97247629_97249143_97249215_97249551_97249646_97250143_97250174_97250773
H1_mix_00052900	chr2	+	747	3	FSM	ENSG00000277701.5	ENST00000657537.1	1167	3	0	420	0	-420	multi-exon	FALSE	canonical	2	7	junction_2	2.5	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTGAACGGCCACACAGT	4827	False	NA	NA	False	NA	NA	NA	97284360	97285494	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_97284786_97284877_97285008_97285302
H1_mix_00052901	chr2	+	2223	6	FSM	ENSG00000115085.14	ENST00000451498.2	1085	6	-777	-361	700	0	multi-exon	FALSE	canonical	2	4	junction_1	4.22374241638857	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGAGCGCCCTCATCTTT	8486	False	NA	5	True	AATAAA	-16	NA	97733628	97739859	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_97734713_97735249_97735457_97737472_97737666_97737756_97737898_97737994_97738108_97739374
H1_mix_00052903	chr2	+	6966	26	NNC	ENSG00000040933.16	novel	9996	26	NA	NA	-54	270	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_13	63.243023330641	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTATTAACAGTTTCTA	NA	False	NA	-16	True	ACTAAA	-45	NA	98444799	98591303	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_98445086_98518963_98519026_98519945_98520155_98520686_98520732_98533376_98533496_98535728_98535846_98536128_98536209_98537862_98537975_98538890_98538982_98539527_98539676_98543876_98544008_98545968_98546074_98546585_98546695_98548951_98548970_98552785_98552970_98554270_98554490_98555552_98555692_98559462_98559496_98563464_98563638_98564639_98564764_98565639_98565767_98566028_98566170_98568570_98568669_98572814_98572928_98576988_98577144_98587475
H1_mix_00052905	chr2	+	9646	26	FSM	ENSG00000040933.16	ENST00000409016.8	9996	26	0	350	0	-350	multi-exon	FALSE	canonical	2	4	junction_13	68.0106344625603	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTTGAATAAACACATGA	-21	True	NA	NA	False	NA	NA	NA	98444853	98594040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_98445086_98518963_98519026_98519945_98520155_98520686_98520732_98533376_98533496_98535728_98535846_98536128_98536209_98537862_98537975_98538890_98538982_98539527_98539676_98543876_98544008_98545968_98546074_98546585_98546695_98548954_98548970_98552785_98552970_98554270_98554490_98555552_98555692_98559462_98559496_98563464_98563638_98564639_98564764_98565639_98565767_98566028_98566170_98568570_98568669_98572814_98572928_98576988_98577144_98587475
H1_mix_00052913	chr2	+	634	5	FSM	ENSG00000115539.14	ENST00000416255.5	657	5	23	0	23	0	multi-exon	FALSE	canonical	1	14	junction_1	481.18343695518	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGAAGTTTCCTGATGT	249	False	NA	NA	False	GATAAA	-20	NA	100563280	100571632	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_100563510_100566502_100566630_100568930_100569022_100569577_100569722_100571589
H1_mix_00052914	chr2	+	944	6	FSM	ENSG00000170485.17	ENST00000433408.1	1047	6	103	0	103	0	multi-exon	FALSE	canonical	1	1	junction_1	1.6	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGTTTTTGTTTTAATT	7495	False	NA	NA	False	AATAAA	-26	NA	100982356	100996055	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_100982378_100988078_100988277_100990255_100990447_100990779_100990873_100993346_100993528_100995795
H1_mix_00052915	chr2	+	2328	2	FSM	ENSG00000071082.11	ENST00000409711.1	2328	2	0	0	0	0	multi-exon	FALSE	canonical	3	13470	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATGAGAACTAATCGCTG	137	False	NA	-25	True	NA	NA	NA	101002690	101006367	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_101002809_101004157
H1_mix_00052916	chr2	+	572	3	FSM	ENSG00000158435.8	ENST00000462489.1	572	3	0	0	0	0	multi-exon	FALSE	canonical	3	626	junction_1	35.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTGAAATTAATGCAGTC	11	False	NA	NA	False	AAAACA	-24	NA	101262430	101266784	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_101262692_101264844_101265048_101266676
H1_mix_00052918	chr2	+	7252	30	NIC	ENSG00000071054.17	novel	7135	31	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	74.6696888013048	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTTATGTGGCATGAGT	33	False	NA	8	True	AATAAA	-14	NA	101697743	101894687	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_101698138_101698472_101698539_101790719_101790777_101823927_101824054_101825318_101825430_101829503_101829595_101831720_101831852_101834408_101834464_101835899_101835979_101839818_101839995_101842608_101842682_101844100_101844312_101855976_101856139_101858995_101859083_101859735_101859865_101864929_101865037_101866427_101866580_101867211_101867310_101868028_101868038_101869621_101869798_101870294_101870416_101873646_101873765_101874081_101874253_101877002_101877147_101882550_101882686_101885186_101885288_101887087_101887238_101887777_101887938_101888795_101888936_101891165
H1_mix_00052919	chr2	+	3792	30	FSM	ENSG00000071054.17	ENST00000347699.8	3792	30	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_16	78.5072230217538	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCTCGGAGCTGCACCGA	370	False	NA	NA	False	NA	NA	NA	101698080	101891321	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_101698138_101698472_101698539_101790719_101790777_101823927_101824054_101825318_101825430_101829503_101829595_101831720_101831852_101834408_101834464_101835899_101835979_101839818_101839995_101842608_101842682_101844100_101844312_101855976_101856139_101858995_101859083_101859642_101859865_101860824_101860987_101864929_101865037_101866430_101866580_101867211_101867310_101869621_101869798_101870294_101870416_101873646_101873765_101874081_101874253_101877002_101877147_101882550_101882686_101885186_101885288_101887087_101887238_101887777_101887938_101888795_101888936_101891165
H1_mix_00052922	chr2	+	2548	17	ISM	ENSG00000071054.17	ENST00000456652.5	3855	25	157920	491	24	0	3prime_fragment	FALSE	canonical	3	86	junction_6	85.3100961199787	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCAGGTGCTATAAGTGT	4242	False	NA	30	True	AATAAA	-38	NA	101856000	101891496	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_101856139_101858995_101859083_101859642_101859865_101864929_101865037_101866430_101866580_101867211_101867310_101869621_101869798_101870294_101870416_101873646_101873765_101874081_101874253_101877002_101877147_101882550_101882686_101885186_101885288_101887087_101887238_101887777_101887938_101888795_101888936_101891165
H1_mix_00052924	chr2	+	2656	18	NIC	ENSG00000071054.17	novel	3416	22	NA	NA	81	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_4	94.6105841317862	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCAGGTGCTATAAGTGT	4299	False	NA	30	True	AATAAA	-38	NA	101856057	101891496	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_101856139_101858995_101859083_101859642_101859865_101860824_101860987_101864929_101865037_101866427_101866580_101867211_101867310_101869621_101869798_101870294_101870416_101873646_101873765_101874081_101874253_101877002_101877147_101882550_101882686_101885186_101885288_101887087_101887238_101887777_101887938_101888795_101888936_101891165
H1_mix_00052927	chr2	+	3174	6	FSM	ENSG00000170417.16	ENST00000409173.5	3198	6	24	0	3	0	multi-exon	TRUE	canonical	2	3	junction_2	12.6585939187573	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTCTCCATATTGTATT	10	True	NA	NA	False	AATAAA	-40	NA	102736934	102817420	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_102737014_102758388_102758474_102762586_102762687_102764328_102764428_102797862_102798001_102814747
H1_mix_00052928	chr2	+	420	3	ISM	ENSG00000235486.1	ENST00000447760.1	831	6	125	5836	125	-5836	5prime_fragment	FALSE	canonical	3	82	junction_1	26	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGTGGACAGAAATGAT	2285	False	NA	NA	False	NA	NA	NA	106369848	106372411	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_106369870_106370938_106371160_106372233
H1_mix_00052929	chr2	+	1367	1	ISM	ENSG00000196862.10	ENST00000408999.4	7212	23	64088	198	64088	-198	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTCTCTTTGACTTGAGA	NA	False	NA	NA	False	AATATA	-5	NA	107890979	107892346	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_107891000_107892300
H1_mix_00052930	chr2	+	2539	8	FSM	ENSG00000198203.10	ENST00000251481.11	2539	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	3.45229884959845	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCATTGTAAAATTTTTGT	-1	True	NA	NA	False	AATAAA	-22	NA	108288894	108309915	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_108289071_108293646_108293819_108294228_108294355_108300837_108300936_108304573_108304701_108305171_108305267_108305414_108305596_108308351
H1_mix_00052931	chr2	+	1664	2	FSM	ENSG00000198075.10	ENST00000494122.1	1757	2	10	83	10	-83	multi-exon	FALSE	canonical	3	11	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAGTGAGCCAAGATAGT	NA	False	NA	NA	False	NA	NA	NA	108377920	108382839	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_108378507_108381761
H1_mix_00052933	chr2	+	6781	22	FSM	ENSG00000135968.22	ENST00000482325.5	6772	22	-9	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	35.3463587851009	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTTATGGCTGCTCTT	23	True	NA	3	True	ATTAAA	-14	NA	108449230	108509397	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_108449281_108449632_108449690_108452398_108452467_108468979_108469085_108469650_108472117_108472826_108472900_108475534_108475636_108475751_108475851_108481696_108481817_108482286_108482452_108483061_108483167_108484148_108484312_108485635_108485737_108485830_108485909_108486510_108486649_108487698_108487821_108489837_108490015_108492572_108492791_108495290_108495486_108496969_108497110_108499552_108499755_108507559
H1_mix_00052935	chr2	+	2010	14	NIC	ENSG00000163006.12	novel	2375	15	NA	NA	-4	-173	combination_of_known_splicesites	FALSE	canonical	2	5	junction_12	47.6388037349992	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGAAGGTATTGGAACTT	8	True	NA	NA	False	AATAAA	-30	NA	108786783	108876403	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_108786916_108788031_108788090_108788851_108788967_108791674_108791803_108794539_108794722_108798427_108798587_108804888_108805009_108812630_108812709_108812819_108812928_108815940_108816106_108839184_108839302_108846737_108846931_108873450_108873590_108876087
H1_mix_00052936	chr2	+	2374	15	NNC	ENSG00000163006.12	novel	2375	15	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_6	52.0202080043547	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAGGGTTAAATAATACT	8	True	NA	NA	False	AATAAA	-17	NA	108786783	108876575	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_108786934_108788031_108788090_108788851_108788967_108791674_108791803_108794539_108794722_108798427_108798587_108804891_108805009_108812630_108812709_108812819_108812928_108815940_108816106_108839184_108839302_108846737_108846931_108856793_108856971_108873450_108873590_108876087
H1_mix_00052939	chr2	+	3285	1	FSM	ENSG00000163006.12	ENST00000609740.1	3285	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTACTGTATCTGTAAAAA	NA	False	NA	17	True	AATAAA	-11	NA	108882190	108885475	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_108882200_108885500
H1_mix_00052940	chr2	+	7253	22	NNC	ENSG00000015568.13	novel	2179	16	NA	NA	-32360	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_5	74.058902830351	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTTACCCACTGTCT	NA	False	NA	NA	False	ATTAAA	-24	NA	109760397	109857695	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_109760772_109801782_109801851_109803431_109803544_109803978_109804132_109808173_109808405_109813459_109813656_109819695_109819784_109821904_109822115_109824221_109824404_109824486_109824663_109824829_109824954_109825875_109826035_109826300_109826439_109826700_109826848_109827791_109827972_109828064_109828149_109831316_109831453_109834996_109835092_109835818_109838043_109845102_109845243_109847809_109848012_109855861
H1_mix_00052945	chr2	+	2625	19	NNC	ENSG00000153093.20	novel	4885	19	NA	NA	21	3591	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_18	43.4360605721179	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCCTTTTATGGACTGT	-18	True	NA	NA	False	AATAAA	-15	NA	110732593	111104842	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_110732775_110768367_110768465_110784731_110784816_110793649_110793737_110794075_110794175_110798609_110798725_110799013_110799101_110801651_110801725_110805262_110805396_110841370_110841406_110908788_110908906_110933488_110933643_110963623_110963714_110987107_110987218_110995892_110996005_111031626_111031715_111049217_111049289_111092864_111092967_111104052
H1_mix_00052946	chr2	+	5487	18	NNC	ENSG00000153093.20	novel	4885	19	NA	NA	1	-84	intron_retention	FALSE	canonical	1	4	junction_14	59.034504015532	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTTACCATCTGACG	1	True	NA	-69	True	NA	NA	NA	110732573	111118464	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_110732775_110768367_110768465_110784731_110784816_110793649_110793737_110794075_110794175_110798609_110798725_110799013_110799101_110801651_110801725_110805262_110805396_110841370_110841406_110933488_110933643_110963623_110963714_110987107_110987218_110995892_110996005_111049217_111049289_111092864_111092967_111114107_111117096_111117615
H1_mix_00052948	chr2	+	5180	3	FSM	ENSG00000153094.24	ENST00000622612.4	4995	3	-186	1	-186	0	multi-exon	FALSE	canonical	3	7	junction_2	11.5	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGAGCGTTTGATTTG	435	False	NA	13	True	AATAAA	-14	NA	111120727	111168444	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_111121189_111123732_111124140_111164132
H1_mix_00052949	chr2	+	5247	5	FSM	ENSG00000153094.24	ENST00000621302.4	5224	5	-24	1	-24	0	multi-exon	FALSE	canonical	3	10	junction_3	12.4197423483742	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGAGCGTTTGATTTG	6	False	NA	13	True	AATAAA	-14	NA	111120889	111168444	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_111121189_111123732_111124140_111150043_111150148_111153779_111153905_111164132
H1_mix_00052951	chr2	+	4773	19	FSM	ENSG00000153214.11	ENST00000650799.1	4773	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	27.6548948628727	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATATTTTGTTCTTTTAA	43	False	NA	-25	True	NA	NA	NA	112055616	112119273	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_112055757_112059976_112060038_112064161_112064254_112066935_112067068_112074911_112074963_112077191_112077283_112081056_112081119_112081334_112081519_112086004_112086105_112089624_112089719_112095227_112095300_112097043_112097153_112097232_112097292_112098594_112098699_112100621_112100696_112106001_112106076_112107787_112107841_112112898_112112930_112116083
H1_mix_00052952	chr2	+	552	7	FSM	ENSG00000153214.11	ENST00000452614.5	552	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	24.2005509579155	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTAAGAATCCAGTTCT	146	False	NA	NA	False	NA	NA	NA	112055719	112081411	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_112055757_112059976_112060038_112064161_112064254_112066935_112067068_112077191_112077283_112081056_112081119_112081334
H1_mix_00052953	chr2	+	725	3	FSM	ENSG00000114999.8	ENST00000476615.1	725	3	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_2	1	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGTCAGGTAGACTGTC	7162	False	NA	NA	False	NA	NA	NA	112501285	112520680	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_112501342_112502911_112503182_112520281
H1_mix_00052955	chr2	+	569	4	FSM	ENSG00000125630.16	ENST00000468475.1	569	4	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_2	26.1278905896872	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAACCTCCACTACTTGG	4477	False	NA	NA	False	NA	NA	NA	112546933	112550908	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_112547180_112547420_112547568_112549266_112549400_112550865
H1_mix_00052959	chr2	+	547	4	FSM	ENSG00000125611.16	ENST00000469030.1	529	4	-18	0	-18	0	multi-exon	FALSE	canonical	1	1	junction_1	345.902683809575	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGATTCCTGCCATCCGT	-2	True	NA	17	True	AATAAA	-21	NA	112584853	112589040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_112584919_112585973_112586115_112586199_112586366_112588865
H1_mix_00052961	chr2	+	576	5	FSM	ENSG00000144136.11	ENST00000456264.5	574	5	-2	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	384.575333972422	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAATGGTGAGTTGGAATT	1033	False	NA	NA	False	NA	NA	NA	112647701	112659087	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_112647739_112652701_112652799_112652888_112652948_112657121_112657242_112658824
H1_mix_00052965	chr2	+	4666	5	NIC	ENSG00000144136.11	novel	3297	11	NA	NA	-2142	0	intron_retention	FALSE	canonical	3	957	junction_1	86.3901035998916	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTCTCATGGTTTTCTT	961	False	NA	54	True	AATAAA	-23	NA	112656220	112663825	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_112659095_112659203_112659763_112660386_112660573_112661141_112661227_112662863
H1_mix_00052966	chr2	+	2208	4	FSM	ENSG00000125637.16	ENST00000460725.5	2763	4	555	0	408	0	multi-exon	FALSE	canonical	0	0	junction_1	3.2659863237109	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGGGAGGTGTGTCAGT	NA	False	NA	NA	False	AATAAA	-13	NA	113197749	113202912	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_113197914_113198739_113198885_113199082_113199227_113201157
H1_mix_00052967	chr2	+	2014	2	FSM	ENSG00000125637.16	ENST00000464559.1	2424	2	410	0	410	0	multi-exon	FALSE	canonical	3	8	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGGGAGGTGTGTCAGT	34	False	NA	NA	False	AATAAA	-13	NA	113198967	113202912	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_113199227_113201157
H1_mix_00052969	chr2	+	1933	11	NNC	ENSG00000146556.15	novel	2050	11	NA	NA	61	0	at_least_one_novel_splicesite	TRUE	canonical	2	6	junction_10	96.7365494526242	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAACAGTGTGCTTTTA	68	False	NA	NA	False	AATAAA	-12	NA	113583715	113599034	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_113583929_113588549_113588704_113595062_113595162_113595368_113595516_113595692_113595830_113596067_113596204_113596380_113596579_113596670_113596830_113597485_113597639_113598397_113598507_113598606
H1_mix_00052970	chr2	+	1683	10	ISM	ENSG00000146556.15	ENST00000691953.1	1955	11	4892	7	-3	0	3prime_fragment	FALSE	canonical	3	21	junction_4	88.5773707968573	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAACAGTGTGCTTTTA	4448	False	NA	NA	False	AATAAA	-12	NA	113588546	113599034	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_113588704_113595062_113595162_113595368_113595516_113595692_113595830_113596067_113596204_113596380_113596579_113596670_113596830_113597485_113597639_113598397_113598467_113598606
H1_mix_00052971	chr2	+	1911	7	ISM	ENSG00000144134.19	ENST00000376439.3	623	8	-86	-158	-6	0	intron_retention	FALSE	canonical	3	42	junction_4	52.1996700713286	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATTGAGTAAATGTATG	29	False	NA	10	True	AGTAAA	-14	NA	113627300	113643389	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_113627401_113628553_113628714_113632914_113632945_113634152_113634233_113641352_113641451_113641780_113641865_113642030
H1_mix_00052972	chr2	+	1058	10	FSM	ENSG00000144134.19	ENST00000393166.7	1052	10	-6	0	-6	0	multi-exon	FALSE	canonical	2	12	junction_9	62.8898704281471	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTGAGTAAATGTATGTG	29	False	NA	12	True	AGTAAA	-16	NA	113627300	113643391	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_113627401_113628553_113628714_113632914_113632945_113634152_113634233_113635050_113635131_113640893_113641006_113641355_113641451_113641780_113641865_113642030_113642146_113643189
H1_mix_00052978	chr2	+	1221	4	NNC	ENSG00000175497.17	novel	913	5	NA	NA	-252	-155442	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	25.2498624858742	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCCATCTCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	115161349	115344127	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_115162029_115162156_115162273_115309238_115309354_115343816
H1_mix_00052979	chr2	+	4608	26	FSM	ENSG00000175497.17	ENST00000393147.6	2758	26	204	-2054	204	1072	multi-exon	FALSE	canonical	3	30	junction_1	10.0952265947823	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTTCAATTAATTTAAT	314	False	NA	-16	True	NA	NA	NA	115161805	115844399	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_115162029_115309238_115309354_115343816_115343913_115499509_115499605_115525897_115525973_115689686_115689740_115689839_115689922_115727815_115727937_115739738_115739894_115746085_115746184_115753173_115753298_115762571_115762611_115768296_115768405_115777207_115777300_115777786_115777835_115780873_115780996_115782351_115782400_115791080_115791180_115791286_115791357_115814792_115814988_115815674_115815730_115836156_115836257_115836506_115836566_115836673_115836747_115840749_115840824_115842210
H1_mix_00052980	chr2	+	3057	26	FSM	ENSG00000175497.17	ENST00000310323.12	3052	26	-5	0	-5	0	multi-exon	FALSE	canonical	1	5	junction_1	12.9519728227016	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAGAAATGTGGATTTCA	267	False	NA	56	True	ATTAAA	-14	NA	115162101	115842900	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_115162273_115309238_115309354_115343816_115343913_115499509_115499605_115525897_115525973_115689686_115689740_115689839_115689922_115727815_115727937_115739738_115739894_115746085_115746184_115753173_115753298_115762571_115762611_115768296_115768405_115777207_115777300_115777786_115777835_115780873_115780996_115782351_115782400_115791080_115791180_115791286_115791357_115814792_115814988_115815674_115815730_115836156_115836257_115836506_115836566_115836673_115836747_115840749_115840824_115842210
H1_mix_00052982	chr2	+	1076	3	Intergenic	novelGene_714	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_2	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGCTCACACAAAGCCTG	NA	False	NA	1	True	GATAAA	-7	NA	117278861	117284458	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_117279352_117281135_117281285_117284021
H1_mix_00052983	chr2	+	510	2	FSM	ENSG00000088205.13	ENST00000489933.1	720	2	0	210	0	-210	multi-exon	FALSE	canonical	3	952	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATACCTTGGTTATAGTAC	6957	False	NA	NA	False	NA	NA	NA	117821975	117822570	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_117822062_117822146
H1_mix_00052985	chr2	+	5674	5	FSM	ENSG00000088205.13	ENST00000476149.1	5674	5	0	0	0	0	multi-exon	FALSE	canonical	3	833	junction_4	109.239129894008	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTGTATTTCGTTTATG	9318	False	NA	15	True	ATTAAA	-11	NA	117824336	117832370	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_117824709_117824939_117825102_117825446_117825600_117826268_117829467_117830581
H1_mix_00052990	chr2	+	784	2	FSM	ENSG00000155368.18	ENST00000492375.1	784	2	0	0	0	0	multi-exon	FALSE	canonical	3	5555	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACATCTTTCCTGCCTTG	3	False	NA	NA	False	NA	NA	NA	119366934	119368845	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_119367061_119368187
H1_mix_00052991	chr2	+	774	4	FSM	ENSG00000155368.18	ENST00000460901.1	774	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	2659.25883575773	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTAACAGATTAGGGGCTA	98	False	NA	-36	True	NA	NA	NA	119367080	119372454	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_119367464_119368187_119368306_119370739_119370803_119372244
H1_mix_00052994	chr2	+	3501	25	NIC	ENSG00000088179.9	novel	11090	27	NA	NA	-97	-134	combination_of_known_splicesites	FALSE	canonical	3	14	junction_11	49.7068489579991	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAAATTTTGTGGTGGTGC	50	False	NA	NA	False	AGTAAA	-26	NA	119759824	119977327	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_119760385_119809836_119809992_119862535_119862644_119877322_119877366_119877463_119877543_119882096_119882150_119882502_119882624_119885794_119885883_119900717_119900807_119915178_119915243_119920068_119920242_119932423_119932550_119934799_119934959_119945080_119945241_119946340_119946425_119946517_119946575_119951972_119952130_119955156_119955324_119956843_119956935_119957015_119957078_119960806_119960954_119962615_119962745_119965496_119965646_119967836_119967973_119976983
H1_mix_00052995	chr2	+	3470	26	NIC	ENSG00000088179.9	novel	11090	27	NA	NA	3	-134	combination_of_known_splicesites	FALSE	canonical	3	22	junction_5	40.6393700738582	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAAATTTTGTGGTGGTGC	20	True	NA	NA	False	AGTAAA	-26	NA	119759924	119977327	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_119760385_119809836_119809992_119862535_119862644_119877322_119877366_119877463_119877543_119882096_119882150_119882502_119882624_119885794_119885883_119900717_119900807_119915178_119915243_119920068_119920242_119926597_119926667_119932423_119932550_119934799_119934959_119945080_119945241_119946340_119946425_119946517_119946575_119951972_119952130_119955156_119955324_119956843_119956935_119957015_119957078_119960806_119960954_119962615_119962745_119965496_119965646_119967836_119967973_119976983
H1_mix_00052996	chr2	+	662	7	FSM	ENSG00000088179.9	ENST00000488279.6	662	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	52.6455653930657	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTAAGTATCAGCCCATT	44	False	NA	NA	False	NA	NA	NA	119760223	119882146	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_119760385_119809836_119809992_119862535_119862644_119877322_119877366_119877442_119877543_119881785_119881831_119882096
H1_mix_00052997	chr2	+	10364	24	ISM	ENSG00000088179.9	ENST00000263708.7	11090	27	117401	0	0	0	3prime_fragment	FALSE	canonical	3	119	junction_10	31.4208580621386	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAGAAGTTTTGAAGATT	NA	False	NA	9	True	AATAAA	-22	NA	119877322	119984899	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_119877366_119877463_119877543_119881785_119881831_119882096_119882150_119882502_119882624_119885794_119885883_119900717_119900807_119915178_119915243_119920068_119920242_119926597_119926667_119932423_119932550_119934799_119934959_119945080_119945241_119946340_119946425_119946517_119946575_119951972_119952130_119955156_119955324_119956843_119956935_119957015_119957078_119960806_119960954_119962615_119962745_119965496_119965646_119967836_119967973_119976983
H1_mix_00052999	chr2	+	11325	14	ISM	ENSG00000088179.9	ENST00000430976.5	4154	20	48934	-8236	-843	798	3prime_fragment	FALSE	canonical	3	129	junction_8	23.3977695796368	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATCAAAATGATTTTTAAC	1644	False	NA	NA	False	AATAAA	-20	NA	119931436	119985697	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_119932550_119934799_119934959_119945080_119945241_119946340_119946425_119946517_119946575_119951972_119952130_119955156_119955324_119956843_119956935_119957015_119957078_119960806_119960954_119962615_119962745_119965496_119965646_119967836_119967973_119976983
H1_mix_00053000	chr2	+	6540	25	NIC	ENSG00000115109.14	novel	6556	25	NA	NA	13	0	intron_retention	FALSE	canonical	3	19	junction_23	99.4700453933523	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTGCACTGTTTCT	8	True	NA	25	True	AATAAA	-18	NA	120013089	120179119	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_120013211_120019076_120019265_120042005_120042111_120073177_120073221_120074099_120074179_120075475_120075521_120075700_120075754_120076970_120077092_120077228_120077317_120078492_120078582_120087170_120087241_120090346_120090517_120091554_120091662_120093248_120093277_120100243_120100287_120100698_120100815_120127687_120127852_120131617_120131716_120143002_120143132_120146224_120146290_120160880_120160975_120164835_120164911_120167465_120167508_120167879_120168008_120174840
H1_mix_00053001	chr2	+	9114	9	ISM	ENSG00000115109.14	ENST00000452780.1	6410	24	104562	0	22937	0	3prime_fragment	FALSE	canonical	3	19	junction_7	31.288975694324	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTTGTGCACTGTTTC	NA	False	NA	24	True	AATAAA	-17	NA	120123646	120179118	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_120127852_120131617_120131716_120143002_120143132_120146224_120146290_120160880_120160975_120164835_120164911_120167465_120167508_120167879_120168008_120174840
H1_mix_00053003	chr2	+	662	1	FSM	ENSG00000236878.1	ENST00000445926.1	662	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAACACATAATGACCCAC	7509	False	NA	NA	False	NA	NA	NA	120211053	120211715	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_120211100_120211700
H1_mix_00053004	chr2	+	419	1	FSM	ENSG00000233286.1	ENST00000450967.1	341	1	-279	201	-279	-201	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCTCCCCTTTTCCATAA	9111	False	NA	NA	False	AATATA	-38	NA	120212655	120213074	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_120212700_120213100
H1_mix_00053008	chr2	+	499	6	FSM	ENSG00000211460.12	ENST00000455432.5	555	6	56	0	56	0	multi-exon	FALSE	canonical	1	1	junction_1	421.381822104371	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCGCCTTCTCAACCTG	52	False	NA	NA	False	NA	NA	NA	121737158	121765218	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_121737186_121757239_121757334_121758709_121758807_121761408_121761525_121763004_121763085_121765133
H1_mix_00053009	chr2	+	3518	6	FSM	ENSG00000211460.12	ENST00000467324.5	2843	6	-116	-559	-2	0	multi-exon	FALSE	canonical	2	11	junction_1	417.411355858942	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGTCCTCCTTTTCAG	NA	False	NA	18	True	ATTAAA	-29	NA	121755542	121767853	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_121755954_121757239_121757334_121758709_121758807_121761408_121761525_121763004_121763085_121765133
H1_mix_00053013	chr2	+	411	2	FSM	ENSG00000236682.3	ENST00000693466.1	1087	2	672	4	626	-4	multi-exon	FALSE	canonical	3	93	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAGTAATCTAGAGATAAA	21	False	NA	6	True	AATAAA	-15	NA	127388880	127389403	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_127388999_127389110
H1_mix_00053015	chr2	+	412	1	FSM	ENSG00000217289.3	ENST00000401540.2	1152	1	423	317	423	-317	mono-exon	FALSE	NA	NA	NA	NA	NA	604	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCCCTCAGATTCAACAAA	NA	False	NA	NA	False	NA	NA	NA	129993311	129993723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_129993300_129993700
H1_mix_00053016	chr2	+	431	3	FSM	ENSG00000152082.15	ENST00000457492.5	435	3	22	-18	22	0	multi-exon	FALSE	canonical	3	16	junction_1	1004	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGTCCAGGTCAGATGTT	110	False	NA	27	True	AATAAA	-16	NA	130181793	130190713	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_130181831_130182626_130182776_130190468
H1_mix_00053017	chr2	+	1853	1	FSM	ENSG00000213225.7	ENST00000452600.1	2235	1	439	-57	439	57	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGCCTAGAGGCTGGC	458	False	NA	NA	False	GGGGCT	-28	NA	130229817	130231670	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_130229800_130231700
H1_mix_00053026	chr2	+	5233	10	ISM	ENSG00000072135.13	ENST00000175756.10	3616	15	10994	0	-1847	0	3prime_fragment	TRUE	canonical	3	29	junction_8	14.5024476435642	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGAGGTCTGTTTTTCCT	NA	False	NA	17	True	AATAAA	-17	NA	130367049	130375405	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_130369202_130369764_130369828_130370047_130370191_130370556_130370624_130370704_130370783_130370874_130370965_130371198_130371288_130372256_130372484_130372872_130372948_130373156
H1_mix_00053028	chr2	+	2819	6	NNC	ENSG00000240253.6	novel	2692	6	NA	NA	-289	288	intron_retention	FALSE	canonical	3	27	junction_1	8.27042925125413	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTCGTTGTCATTA	NA	False	NA	NA	False	AATAAA	-19	NA	130692992	130704749	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_130693797_130695236_130695335_130695466_130695592_130696341_130696410_130702253_130702429_130703200
H1_mix_00053029	chr2	+	3700	5	FSM	ENSG00000240253.6	ENST00000425151.5	573	5	-851	-2276	-398	288	multi-exon	FALSE	canonical	3	27	junction_1	8.8140512819021	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTCGTTGTCATTA	NA	False	NA	NA	False	AATAAA	-19	NA	130692883	130704749	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_130693797_130695236_130695335_130695466_130695592_130696341_130696410_130702253
H1_mix_00053033	chr2	+	2870	10	Fusion	ENSG00000284479.1_ENSG00000136002.20	novel	3229	7	NA	NA	17	0	multi-exon	FALSE	canonical	3	31	junction_1	25.4592387848925	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGCTAGCCCGTTTT	-34	True	NA	15	True	AATAAA	-15	NA	131034988	131047253	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr2_+_131035289_131038852_131039033_131040015_131040193_131040260_131040441_131041229_131041463_131041814_131041945_131043451_131043584_131044298_131044543_131045368_131045447_131046037
H1_mix_00053035	chr2	+	3773	6	FSM	ENSG00000115762.17	ENST00000439822.6	4177	6	404	0	-51	0	multi-exon	FALSE	canonical	3	11	junction_4	260.878822444444	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGACTTCTGTTGTCTT	465	False	NA	24	True	ATTAAA	-24	NA	131105250	131149851	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_131105399_131120933_131120979_131125752_131125906_131126683_131126787_131140166_131140276_131146636
H1_mix_00053038	chr2	+	3924	8	NIC	ENSG00000115762.17	novel	4208	8	NA	NA	-51	0	combination_of_known_splicesites	FALSE	canonical	3	49	junction_6	209.797667347589	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGACTTCTGTTGTCTT	465	False	NA	24	True	ATTAAA	-24	NA	131105250	131149851	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_131105399_131120933_131120979_131125752_131125906_131126683_131126787_131130720_131130761_131132901_131133016_131140169_131140276_131146636
H1_mix_00053039	chr2	+	930	4	FSM	ENSG00000163040.15	ENST00000454549.6	930	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	40.8275506109403	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCGTCCATGTGCTCACAG	-41	True	NA	NA	False	NA	NA	NA	131527855	131530837	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_131528347_131528492_131528628_131529646_131529692_131530578
H1_mix_00053040	chr2	+	785	2	FSM	ENSG00000163040.15	ENST00000468650.1	762	2	-23	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGAACTGGGCCCTTCAG	-9	True	NA	NA	False	AAGAAA	-2	NA	131527887	131529691	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_131528628_131529646
H1_mix_00053041	chr2	+	1231	8	NIC	ENSG00000163040.15	novel	1543	8	NA	NA	2	-132	combination_of_known_junctions	FALSE	canonical	3	23	junction_4	75.6854392488127	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTGATCTCCAAACTGAC	-7	True	NA	NA	False	GATAAA	-2	NA	131527889	131533532	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_131528221_131529646_131529692_131530578_131530828_131531663_131531803_131532709_131532782_131532863_131532938_131533012_131533070_131533268
H1_mix_00053044	chr2	+	333	1	NIC	ENSG00000204434.6	novel	3569	11	NA	NA	32341	-3722	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGAGGTGTTTTCTTTA	NA	False	NA	NA	False	NA	NA	NA	131624092	131624425	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_131624100_131624400
H1_mix_00053046	chr2	+	8142	16	FSM	ENSG00000152127.9	ENST00000281923.4	8332	16	190	0	190	0	multi-exon	FALSE	canonical	1	2	junction_11	3.36386021641143	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGGAAGTGATTTTTGG	99	False	NA	22	True	AATAAA	-15	NA	134254261	134454621	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_134254645_134270385_134270551_134317528_134317606_134318649_134318740_134336216_134336289_134338258_134338421_134341589_134341760_134344929_134345065_134349804_134349939_134362274_134362409_134402987_134403138_134412868_134413016_134422802_134422920_134428364_134428440_134441757_134441916_134448648
H1_mix_00053047	chr2	+	7506	12	ISM	ENSG00000152127.9	ENST00000281923.4	8332	16	82066	0	82066	0	3prime_fragment	FALSE	canonical	1	2	junction_7	3.28281274277596	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGGAAGTGATTTTTGG	NA	False	NA	22	True	AATAAA	-15	NA	134336137	134454621	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_134336289_134338258_134338421_134341589_134341760_134344929_134345065_134349804_134349939_134362274_134362409_134402987_134403138_134412868_134413016_134422802_134422920_134428364_134428440_134441757_134441916_134448648
H1_mix_00053048	chr2	+	4341	24	NIC	ENSG00000048991.17	novel	4272	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_13	74.3198777878741	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGCTCACTTTGTCTTTT	13	True	NA	NA	False	AATAAA	-12	NA	135531500	135725266	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_135531634_135602499_135602709_135604805_135605017_135621493_135621609_135622653_135622733_135631717_135631778_135631860_135632002_135635889_135635999_135636087_135636184_135638617_135638656_135638738_135638790_135638895_135639123_135641535_135641605_135645378_135645528_135651729_135652033_135661269_135661394_135675331_135675487_135680172_135680325_135709432_135709537_135710058_135710232_135715549_135715695_135721923_135722007_135722468_135722554_135723936
H1_mix_00053049	chr2	+	851	8	FSM	ENSG00000048991.17	ENST00000456040.1	851	8	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	103.220588042882	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGTACTAACTTACTTAG	2280	False	NA	75	True	NA	NA	NA	135604855	135636183	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_135605017_135616667_135616758_135621493_135621609_135622653_135622733_135631717_135631778_135631860_135632002_135635889_135635999_135636087
H1_mix_00053054	chr2	+	6591	11	NIC	ENSG00000144228.9	novel	6056	11	NA	NA	0	768	intron_retention	FALSE	canonical	2	9	junction_3	12.2641754716736	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	15	True	NA	NA	False	AAAAAG	-33	NA	138501931	138574315	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_138502120_138550156_138550295_138550482_138550605_138550973_138551055_138552553_138552682_138559021_138559200_138559281_138559338_138560804_138560928_138564707_138564851_138564939_138564994_138568935
H1_mix_00053055	chr2	+	4484	8	ISM	ENSG00000204406.14	ENST00000638043.2	7019	14	-268	43277	0	-1399	5prime_fragment	FALSE	canonical	1	4	junction_3	5.2333311668612	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTTAAAAAAAAAGCTAAT	144	False	NA	-49	True	NA	NA	NA	148021237	148471056	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_148021685_148178699_148178794_148233244_148233396_148342213_148342337_148458202_148458872_148462581_148462685_148463738_148463920_148468340
H1_mix_00053057	chr2	+	3222	3	FSM	ENSG00000168280.18	ENST00000679018.1	3377	3	-14	169	-14	-169	multi-exon	FALSE	canonical	3	211	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTTGTAATGAGTTGCT	9670	False	NA	NA	False	TTTAAA	-3	NA	148875212	148931880	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_148875744_148922136_148922228_148929280
H1_mix_00053058	chr2	+	6965	26	FSM	ENSG00000168280.18	ENST00000677280.1	6951	26	-14	0	-14	0	multi-exon	FALSE	canonical	1	3	junction_18	40.7052625590353	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTCTGTTTCTCCTTAT	9670	False	NA	NA	False	AATAAA	-17	NA	148875212	149026759	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_148875744_148922136_148922228_148929280_148929355_148937283_148937389_148941609_148941659_148941934_148941991_148942672_148942761_148946898_148947024_148949838_148949944_148950313_148950463_148961970_148962120_148973335_148973512_148978921_148978991_148981354_148981562_148983619_148983767_148991009_148991199_148994420_148994539_148997263_148997341_148998402_148998510_149000422_149000525_149000721_149000783_149005392_149005465_149007962_149008068_149010134_149010352_149011569_149011684_149023077
H1_mix_00053059	chr2	+	5574	4	FSM	ENSG00000168280.18	ENST00000677563.1	7068	4	1494	0	1494	0	multi-exon	FALSE	canonical	3	179	junction_3	9.20144916122817	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGATGGGGGGGAGCATC	2488	False	NA	NA	False	NA	NA	NA	148986216	148998796	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_148991199_148994420_148994539_148997263_148997341_148998399
H1_mix_00053060	chr2	+	7065	11	FSM	ENSG00000168280.18	ENST00000679236.1	7065	11	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_3	11.3406349028615	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTCTGTTTCTCCTTAT	5063	False	NA	NA	False	AATAAA	-17	NA	148988791	149026759	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_148991199_148994420_148994539_148997263_148997341_148998399_148998510_149000422_149000525_149000721_149000783_149005392_149005465_149007962_149008068_149010134_149010352_149011569_149011684_149023077
H1_mix_00053062	chr2	+	7716	35	FSM	ENSG00000080345.18	ENST00000428287.6	7722	35	6	0	6	0	multi-exon	TRUE	canonical	0	0	junction_16	54.7530236481595	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTGGTGAAACATGTAA	-32	True	NA	-46	True	NA	NA	NA	151409891	151475388	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_151409940_151410413_151410528_151411259_151411339_151414822_151414920_151416560_151416689_151416806_151416902_151420189_151420380_151422949_151423043_151428783_151428923_151433076_151433229_151435462_151435581_151436826_151437004_151437240_151437352_151438683_151438747_151440026_151440128_151441904_151441992_151443258_151443330_151443528_151443710_151445337_151445446_151446425_151446576_151451605_151451706_151454894_151455160_151456577_151456621_151457760_151457964_151458810_151458911_151459999_151460120_151461137_151461290_151462241_151462323_151462411_151462467_151462883_151466121_151467999_151468147_151468640_151468757_151469710_151469865_151473963_151474073_151474856
H1_mix_00053063	chr2	+	9813	36	NNC	ENSG00000080345.18	novel	14662	36	NA	NA	6	1715	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_16	48.6643145457129	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACACTCAAATGTGTCTT	-32	True	NA	7	True	AATAAA	-18	NA	151409891	151477337	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_151410034_151410413_151410528_151411259_151411339_151414822_151414920_151416560_151416689_151416806_151416902_151420189_151420380_151422949_151423043_151428783_151428923_151433076_151433229_151435462_151435581_151436826_151437004_151437240_151437352_151438683_151438747_151440026_151440128_151441904_151441968_151443258_151443330_151443528_151443710_151445337_151445446_151446425_151446576_151451605_151451706_151454894_151455160_151456577_151456621_151457760_151457964_151458810_151458911_151459999_151460120_151461137_151461290_151462241_151462323_151462411_151462467_151462883_151466121_151467999_151468147_151468473_151468552_151468640_151468757_151469710_151469865_151473963_151474073_151474856
H1_mix_00053064	chr2	+	8329	19	ISM	ENSG00000080345.18	ENST00000453091.6	8053	35	32920	-1715	-21897	1715	3prime_fragment	FALSE	canonical	3	83	junction_15	56.574571131962	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACACTCAAATGTGTCTT	NA	False	NA	7	True	AATAAA	-18	NA	151442802	151477337	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_151443330_151443528_151443710_151445337_151445446_151446425_151446576_151451605_151451706_151454894_151455160_151456577_151456621_151457760_151457964_151458810_151458911_151459999_151460120_151461137_151461290_151462241_151462323_151462411_151462467_151462883_151466121_151467999_151468147_151468640_151468757_151469710_151469865_151473963_151474073_151474856
H1_mix_00053065	chr2	+	545	2	FSM	ENSG00000080345.18	ENST00000467762.2	545	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGTCTATGCACAA	NA	False	NA	NA	False	ATTAAA	-14	NA	151505947	151507112	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_151506376_151506995
H1_mix_00053066	chr2	+	5083	25	NIC	ENSG00000157827.20	novel	5630	26	NA	NA	475	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_18	23.4698018147197	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTCTGTAATATGTTGTA	451	False	NA	25	True	AATAAA	-13	NA	152335648	152649823	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_152335721_152521942_152522027_152542738_152542820_152549020_152549098_152558739_152558824_152560882_152561036_152575135_152575245_152578887_152578965_152580955_152581050_152607338_152607414_152611494_152611606_152614850_152615001_152617090_152617193_152618845_152619159_152619508_152619719_152625437_152625563_152626524_152626728_152628298_152628534_152629824_152629906_152632007_152632138_152636426_152636591_152637572_152637675_152639957_152640057_152640790_152640915_152647795
H1_mix_00053067	chr2	+	4252	1	FSM	ENSG00000213197.3	ENST00000439252.1	694	1	-2422	-1136	-2422	1136	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGAGCCCTTAAAATTG	4219	False	NA	NA	False	NA	NA	NA	152387514	152391766	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_152387500_152391800
H1_mix_00053069	chr2	+	6029	14	NIC	ENSG00000144278.15	novel	5657	13	NA	NA	0	174	combination_of_known_junctions	FALSE	canonical	2	5	junction_13	28.7272420860378	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAACACAGAGATTTTTAA	1	True	NA	NA	False	ACTAAA	-27	NA	153871921	154454153	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_153872304_153900935_153901008_153944393_153944640_154140336_154140506_154242029_154242197_154242697_154242906_154245811_154245983_154259020_154259139_154301408_154301590_154395990_154396131_154408983_154409083_154438591_154438727_154446567_154446766_154450410
H1_mix_00053070	chr2	+	668	3	FSM	ENSG00000144278.15	ENST00000453715.1	668	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	1.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAATATAAATAATAGCAA	NA	False	NA	NA	False	ACTAAA	-24	NA	154438591	154450745	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_154438727_154446567_154446766_154450410
H1_mix_00053072	chr2	+	3884	3	FSM	ENSG00000115159.16	ENST00000492005.1	437	3	-74	-3373	-74	18	multi-exon	FALSE	canonical	3	158	junction_2	8	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTCCTTATTTATTTA	NA	False	NA	31	True	NA	NA	NA	156579008	156586421	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_156579165_156579689_156579789_156582792
H1_mix_00053073	chr2	+	1677	3	NNC	ENSG00000287048.1	novel	1624	2	NA	NA	-56948	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	109	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATAGTGTCTTTAAATTA	NA	False	NA	9	True	ATTAAA	-20	NA	156731782	156865706	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_156731834_156743606_156743649_156864122
H1_mix_00053074	chr2	+	1871	1	FSM	ENSG00000270557.1	ENST00000604340.1	883	1	-992	4	-992	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACACTGCGGACTCGCCC	106	False	NA	NA	False	AATAAA	-12	NA	157876690	157878561	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_157876700_157878600
H1_mix_00053076	chr2	+	3589	5	NNC	ENSG00000144283.23	novel	1566	4	NA	NA	-2065	-6	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	49.4191258522447	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGGAAATGTGTTCTCTA	NA	False	NA	19	True	AATAAA	-15	NA	158667104	158681420	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_158669303_158669719_158669916_158673676_158673762_158673882_158674001_158680428
H1_mix_00053078	chr2	+	4159	2	FSM	ENSG00000115183.15	ENST00000496406.1	7586	2	3426	1	3426	-1	multi-exon	FALSE	canonical	3	29	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTTTGCACTAAATGA	NA	False	NA	NA	False	AATAAA	-14	NA	159227818	159232658	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_159228897_159229577
H1_mix_00053079	chr2	+	3396	10	NNC	ENSG00000136536.15	novel	983	4	NA	NA	-103	-3	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	252.376457981346	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGAAATGTTTCCTTTTA	87	False	NA	26	True	AATAAA	-23	NA	159712353	159768580	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_159712383_159729008_159729176_159743060_159743254_159745769_159745938_159747804_159748904_159752401_159752572_159759225_159759336_159762879_159762994_159764625_159764675_159767283
H1_mix_00053080	chr2	+	3303	8	FSM	ENSG00000136536.15	ENST00000539065.5	3303	8	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_7	352.247883497646	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATGTTTCCTTTTAAAC	190	False	NA	29	True	AATAAA	-26	NA	159712456	159768583	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_159712607_159729008_159729176_159743060_159743254_159747804_159748904_159752401_159752572_159759225_159759336_159762879_159762994_159767283
H1_mix_00053083	chr2	+	641	4	FSM	ENSG00000136560.14	ENST00000494976.1	636	4	-5	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	8.01387685344754	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATGGCTTTTTGACATC	2	True	NA	NA	False	NA	NA	NA	161160426	161162890	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_161160487_161161284_161161413_161161812_161161908_161162532
H1_mix_00053086	chr2	+	555	3	FSM	ENSG00000136560.14	ENST00000403609.1	555	3	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_2	7.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACTGACCGTTTTTCTAC	7245	False	NA	NA	False	AATAAA	-19	NA	161179620	161204979	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_161179762_161203486_161203596_161204674
H1_mix_00053087	chr2	+	510	3	FSM	ENSG00000115233.12	ENST00000478123.5	478	3	-72	40	-36	-40	multi-exon	FALSE	canonical	3	1724	junction_1	62.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGTAAGAATCTTACCTT	194	False	NA	NA	False	AAGAAA	-34	NA	161308388	161318982	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_161308605_161316436_161316570_161318821
H1_mix_00053088	chr2	+	1786	2	FSM	ENSG00000115233.12	ENST00000492908.1	1786	2	0	0	0	0	multi-exon	FALSE	canonical	3	1782	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTCCTGAGATCTTTT	NA	False	NA	12	True	AATAAA	-15	NA	161407527	161411715	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_161408900_161411301
H1_mix_00053089	chr2	+	579	5	FSM	ENSG00000115271.11	ENST00000479199.1	597	5	-23	41	0	35	multi-exon	FALSE	canonical	3	354	junction_4	44.0028408173836	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTTTGTTCTTTGATTA	26	False	NA	NA	False	TATAAA	-3	NA	162344158	162356940	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_162344276_162347577_162347743_162352337_162352408_162356437_162356482_162356757
H1_mix_00053090	chr2	+	1808	7	FSM	ENSG00000115271.11	ENST00000487445.6	1808	7	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_6	46.0341057140126	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCATCCTGCTCTGAATC	26	False	NA	NA	False	NA	NA	NA	162344158	162360971	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_162344276_162347577_162347743_162352337_162352408_162356437_162356482_162356757_162356906_162359043_162359553_162360216
H1_mix_00053092	chr2	+	779	3	FSM	ENSG00000235192.1	ENST00000425688.1	779	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	2.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGCCTACATGGTGAAAC	18	True	NA	NA	False	NA	NA	NA	165794850	165810010	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_165795080_165801180_165801583_165809862
H1_mix_00053095	chr2	+	7126	13	FSM	ENSG00000138398.17	ENST00000677392.1	7125	13	-1	0	-1	0	multi-exon	FALSE	canonical	3	351	junction_1	50.0982368285884	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAACTATACTATAATAAAC	-18	True	NA	-4	True	ATTAAA	-1	NA	169584340	169641387	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_169584491_169603641_169603695_169604025_169604103_169604186_169604262_169606038_169606147_169607103_169607149_169608670_169608759_169614463_169614494_169614584_169614725_169630773_169631934_169633159_169633248_169636091_169636229_169636412
H1_mix_00053101	chr2	+	3821	12	FSM	ENSG00000144357.18	ENST00000444475.5	3821	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	22.8646755592497	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTACTGCTTACATGTTT	7498	False	NA	30	True	AATAAA	-38	NA	170008839	170084131	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_170008941_170013840_170013973_170015280_170015367_170029345_170029449_170040881_170040986_170055459_170055585_170061078_170061187_170061317_170061444_170073427_170073608_170079813_170080024_170080544_170080685_170081725
H1_mix_00053102	chr2	+	1201	2	Genic_Genomic	ENSG00000128692.8	novel	984	1	NA	NA	0	274	multi-exon	FALSE	non_canonical	3	73	junction_1	0	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGTTATTATAACAGTGA	89	False	NA	NA	False	GATAAA	-2	NA	170751804	170753062	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr2_+_170752470_170752526
H1_mix_00053103	chr2	+	1016	6	Fusion	ENSG00000204334.7_ENSG00000239467.7	novel	1363	6	NA	NA	61	6576	multi-exon	FALSE	canonical	3	21	junction_1	23.7537365481728	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGCTTACCTGGCTACT	238	False	NA	23	True	AATAAA	-39	NA	170771337	170785305	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr2_+_170771428_170777146_170777178_170777376_170777426_170777643_170777681_170782240_170782390_170784645
H1_mix_00053106	chr2	+	812	7	FSM	ENSG00000115806.13	ENST00000471559.5	812	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	409.586274997914	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTAGCTCAACTCCACCA	12	False	NA	NA	False	NA	NA	NA	170928463	170956514	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_170928561_170948349_170948431_170949538_170949743_170950203_170950291_170951327_170951459_170954649_170954783_170956435
H1_mix_00053107	chr2	+	568	5	FSM	ENSG00000115806.13	ENST00000444801.5	568	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	467.493582843658	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCATTGAAACTGTATGT	6	False	NA	NA	False	NA	NA	NA	170929196	170951366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_170929404_170948349_170948381_170949538_170949743_170950203_170950291_170951327
H1_mix_00053108	chr2	+	951	8	FSM	ENSG00000115806.13	ENST00000493692.5	951	8	0	0	0	0	multi-exon	FALSE	canonical	2	48	junction_5	359.004121402072	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTTCTGCAGCAAGCTCA	14	True	NA	NA	False	NA	NA	NA	170929252	170965891	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_170929404_170948349_170948431_170949538_170949743_170950203_170950291_170951327_170951459_170961662_170961750_170962838_170962947_170965789
H1_mix_00053110	chr2	+	817	1	FSM	ENSG00000228507.1	ENST00000458547.1	510	1	-219	-88	-219	88	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGCCAGGCCCTTGTACC	NA	False	NA	NA	False	NA	NA	NA	171491202	171492019	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_171491200_171492000
H1_mix_00053112	chr2	+	1597	10	FSM	ENSG00000128708.13	ENST00000412731.5	1567	10	-26	-4	-26	0	multi-exon	FALSE	canonical	3	41	junction_2	287.380291771662	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCCTTCCACACTTTGC	-7	True	NA	16	True	AATAAA	-20	NA	171922421	171983686	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_171922508_171925536_171925642_171952880_171953002_171965337_171965518_171965786_171965909_171966408_171966514_171966842_171966950_171976156_171976309_171979246_171979364_171983184
H1_mix_00053113	chr2	+	662	4	FSM	ENSG00000172878.14	ENST00000468537.1	906	4	244	0	244	0	multi-exon	FALSE	canonical	3	27	junction_2	7.58653778449403	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAACAGGGAAATGACC	NA	False	NA	NA	False	AATAAA	-29	NA	172070906	172080479	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_172071071_172077796_172077895_172079214_172079263_172080127
H1_mix_00053114	chr2	+	970	7	FSM	ENSG00000091409.16	ENST00000412899.5	970	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	239.846941934967	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTTGGAGGTGCAGTGTA	17	False	NA	NA	False	NA	NA	NA	172427353	172474977	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_172427471_172465538_172465664_172467480_172467561_172469124_172469381_172470973_172471106_172474054_172474266_172474928
H1_mix_00053122	chr2	+	1369	10	FSM	ENSG00000144354.14	ENST00000410101.7	1369	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	273.689244343171	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATTTTTTCACTGAAACC	9	True	NA	NA	False	NA	NA	NA	173354871	173367720	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_173354985_173358711_173358838_173359386_173359492_173363225_173363463_173363817_173363896_173364794_173364990_173365451_173365593_173366282_173366433_173367149_173367287_173367633
H1_mix_00053123	chr2	+	648	3	Antisense	novelGene_ENSG00000237617.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	5.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAATGGCAAGAAATCCC	NA	False	NA	NA	False	NA	NA	NA	173532813	173707694	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_+_173533340_173692683_173692751_173707639
H1_mix_00053127	chr2	+	5626	10	FSM	ENSG00000170144.21	ENST00000676736.1	5626	10	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_4	1143.16160031924	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTACCAGTAAGTAATA	NA	False	NA	-32	True	NA	NA	NA	177212748	177223920	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_177212872_177215538_177215662_177215749_177215897_177215977_177216189_177216675_177216772_177216859_177216941_177217704_177217846_177219036_177219160_177219246_177219315_177219407
H1_mix_00053128	chr2	+	1920	11	FSM	ENSG00000170144.21	ENST00000679328.1	1911	11	-9	0	-9	0	multi-exon	FALSE	canonical	3	104	junction_1	1041.30339478943	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGCATTAAGATTACCTT	462	False	NA	-31	True	GATAAA	-36	NA	177213256	177220085	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_177213419_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177217704_177217846_177219036_177219160_177219246_177219315_177219407
H1_mix_00053130	chr2	+	6280	5	FSM	ENSG00000018510.18	ENST00000409888.1	815	5	-33	-5432	-11	16	multi-exon	FALSE	canonical	0	0	junction_2	202.391174461734	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGTTTATTTCATATTG	NA	False	NA	22	True	AATAAA	-32	NA	177392734	177543850	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_177393050_177420268_177420359_177521328_177521369_177523747_177523806_177538073
H1_mix_00053131	chr2	+	2114	20	FSM	ENSG00000018510.18	ENST00000679459.1	2103	20	-11	0	-11	0	multi-exon	TRUE	canonical	3	6	junction_19	108.064308339257	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCATGATCCACCCACGTT	NA	False	NA	NA	False	NA	NA	NA	177392734	177567024	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_177393050_177420268_177420359_177434326_177434418_177436763_177436885_177436979_177437055_177440964_177441037_177442406_177442487_177445545_177445627_177461892_177462019_177468415_177468525_177482058_177482187_177493147_177493200_177497688_177497766_177499617_177499731_177505505_177505576_177507969_177508032_177513818_177513909_177521268_177521369_177523747_177523806_177566820
H1_mix_00053132	chr2	+	1049	7	FSM	ENSG00000018510.18	ENST00000680677.1	1143	7	0	94	0	-94	multi-exon	FALSE	canonical	3	385	junction_5	33.2549077413979	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCTGTAATCCCAGCTA	-6	True	NA	NA	False	AATACA	-24	NA	177392759	177442716	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_177393050_177420268_177420359_177434326_177434418_177436763_177436885_177436979_177437055_177440964_177441037_177442406
H1_mix_00053134	chr2	+	6926	24	FSM	ENSG00000079156.17	ENST00000359685.7	7114	24	-6	194	-6	-194	multi-exon	FALSE	canonical	1	3	junction_13	9.80432372502581	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTTAAGATTAAAGTATTT	-18	True	NA	NA	False	TATAAA	-3	NA	178194474	178399238	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_178194675_178284926_178285122_178306029_178306287_178324176_178324270_178328255_178328379_178331551_178331606_178332640_178332755_178332870_178333042_178336300_178336434_178338990_178339095_178339671_178339765_178349223_178349390_178361681_178361816_178373889_178374028_178382419_178382508_178383023_178383278_178384038_178384177_178385457_178385522_178387060_178387140_178389008_178389154_178391072_178391218_178392411_178392539_178394312_178394436_178395450
H1_mix_00053136	chr2	+	991	3	FSM	ENSG00000223960.8	ENST00000661271.1	1057	3	66	0	-6	0	multi-exon	FALSE	canonical	2	4	junction_1	10	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTGTAGACAGTAATAAAT	-36	True	NA	NA	False	NA	NA	NA	178413918	178434057	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_178414114_178430769_178430890_178433381
H1_mix_00053137	chr2	+	2534	4	FSM	ENSG00000223960.8	ENST00000663803.1	2776	4	242	0	-6	0	multi-exon	FALSE	canonical	3	4	junction_2	9.67241208569794	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATCTTGGGGAAAAAAAAAA	-36	True	NA	NA	False	NA	NA	NA	178413918	178435210	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_178414114_178426365_178426681_178430694_178430890_178433381
H1_mix_00053139	chr2	+	1289	7	FSM	ENSG00000204311.15	ENST00000647226.1	1289	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5.07991688470939	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCTGGGTATCATATTC	126	False	NA	NA	False	ATTAAA	-30	NA	178451739	178461394	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_178451871_178453430_178453621_178454331_178454528_178456009_178456152_178458509_178458628_178460347_178460447_178460981
H1_mix_00053140	chr2	+	515	2	FSM	ENSG00000237298.10	ENST00000592161.1	587	2	-9	81	-6	-81	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGCTTCAATTTTAGGC	-14	True	NA	NA	False	NA	NA	NA	178523206	178527280	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_178523637_178527195
H1_mix_00053145	chr2	+	439	1	FSM	ENSG00000271011.1	ENST00000604215.1	520	1	128	-47	128	47	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTCTAATTCTGAATTC	4657	False	NA	NA	False	NA	NA	NA	178577230	178577669	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_178577200_178577700
H1_mix_00053146	chr2	+	710	4	FSM	ENSG00000237298.10	ENST00000629117.2	710	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.4142135623731	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCAGGCTTCTTTGGAGG	NA	False	NA	NA	False	NA	NA	NA	178584669	178599717	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_178584994_178591138_178591315_178597595_178597682_178599593
H1_mix_00053148	chr2	+	263	1	FSM	ENSG00000267784.1	ENST00000590024.1	3590	1	399	2928	399	-2928	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAAGAGGGAGGAACTGC	NA	False	NA	NA	False	NA	NA	NA	178723855	178724118	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_178723900_178724100
H1_mix_00053149	chr2	+	279	1	NIC	ENSG00000287149.1	novel	2019	6	NA	NA	71	-124351	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCAGTTGGGAATAGTT	NA	False	NA	NA	False	NA	NA	NA	178882950	178883229	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_178883000_178883200
H1_mix_00053150	chr2	+	755	6	FSM	ENSG00000170035.16	ENST00000602479.5	752	6	-3	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	345.046315731671	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTAAGCAAATCTTTATTA	5	True	NA	NA	False	NA	NA	NA	180980372	181060810	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_180980547_180980941_180980974_180982017_180982237_180984042_180984094_181057692_181057826_181060664
H1_mix_00053151	chr2	+	909	7	FSM	ENSG00000170035.16	ENST00000602959.5	909	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	319.290054478508	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCCCCAAAAAGGTAAATGC	5	True	NA	NA	False	NA	NA	NA	180980372	181063029	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_180980460_180980941_180980974_180982017_180982237_180984042_180984094_181057692_181057826_181060664_181060813_181062790
H1_mix_00053152	chr2	+	643	4	FSM	ENSG00000170035.16	ENST00000602888.5	499	4	-35	-109	-35	0	multi-exon	FALSE	canonical	3	840	junction_3	38.5861230093007	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCCCCAAAAAGGTAAATGC	50	False	NA	NA	False	NA	NA	NA	180983970	181063029	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_180984094_181057692_181057826_181060664_181060813_181062790
H1_mix_00053153	chr2	+	1306	2	FSM	ENSG00000115232.14	ENST00000476089.1	1846	2	160	380	-24	-380	multi-exon	FALSE	canonical	2	9	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGCACACAGGCAAGTGG	-24	True	NA	NA	False	NA	NA	NA	181457361	181459011	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_181457852_181458195
H1_mix_00053154	chr2	+	369	3	FSM	ENSG00000115232.14	ENST00000490435.5	720	3	351	0	60	0	multi-exon	FALSE	canonical	2	5	junction_2	1.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTAAGTATATGTGGTA	5211	False	NA	NA	False	NA	NA	NA	181498631	181511771	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_181498778_181509657_181509808_181511698
H1_mix_00053155	chr2	+	4965	17	FSM	ENSG00000138434.17	ENST00000320370.11	4965	17	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_16	8.6277169633687	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTAGTGGTTTCTTAA	16	True	NA	14	True	AATAAA	-19	NA	181891954	181930738	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_181892278_181892614_181892661_181896029_181896080_181896907_181896965_181898879_181898920_181899013_181899113_181900695_181900905_181901765_181902467_181909898_181909972_181913844_181913934_181915215_181916428_181918597_181918676_181918754_181918883_181919295_181919447_181920596_181920663_181921947_181922413_181929560
H1_mix_00053156	chr2	+	19665	24	FSM	ENSG00000077232.19	ENST00000680258.1	20086	24	0	421	0	-421	multi-exon	FALSE	canonical	3	16	junction_13	154.878158099626	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACACCTCCTCCAAATG	-20	True	NA	NA	False	GATAAA	-24	NA	182716254	182794043	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_182716484_182717015_182717073_182717940_182718291_182720006_182720170_182722024_182722076_182728575_182728659_182728862_182728995_182729847_182729942_182731029_182731108_182732498_182732543_182736248_182736387_182740298_182740389_182741242_182741357_182743657_182743713_182751657_182751786_182752071_182752189_182755002_182755105_182756313_182756470_182757691_182757826_182758836_182758891_182759159_182759308_182762681_182762802_182775315_182775421_182777120
H1_mix_00053159	chr2	+	5900	4	FSM	ENSG00000162999.13	ENST00000354221.5	5191	4	21	-730	21	730	multi-exon	TRUE	canonical	3	15	junction_1	1.24721912892465	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTTCTTTCCAGCTTCTG	14	True	NA	96	True	NA	NA	NA	183078767	183100738	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_183079160_183083507_183083555_183087039_183087193_183095430
H1_mix_00053160	chr2	+	726	4	FSM	ENSG00000162999.13	ENST00000469344.1	726	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	7.11805216802087	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTAGTAATCATTGCTTT	202	False	NA	NA	False	ATTAAA	-34	NA	183078988	183095903	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_183079160_183083507_183083555_183087157_183087193_183095430
H1_mix_00053161	chr2	+	611	2	FSM	ENSG00000138448.12	ENST00000496854.1	611	2	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACTACATTTATTTTTA	5715	False	NA	NA	False	NA	NA	NA	186668523	186669914	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_186668921_186669700
H1_mix_00053166	chr2	+	3104	12	NNC	ENSG00000144366.16	novel	3294	12	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	2	61	junction_7	195.587607983467	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATTGCATAATTCATTT	32	True	NA	NA	False	AATAAA	-15	NA	188292061	188595926	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_188292167_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180_188541317_188569238_188569356_188570027_188570121_188584264_188584404_188587854_188587950_188593939
H1_mix_00053168	chr2	+	3326	12	NNC	ENSG00000144366.16	novel	3544	13	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	2	38	junction_1	226.263468162214	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATTGCATAATTCATTT	-4	True	NA	NA	False	AATAAA	-15	NA	188292853	188595926	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_188293181_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180_188541317_188569238_188569356_188570027_188570121_188584264_188584404_188587854_188587950_188593939
H1_mix_00053172	chr2	+	558	4	FSM	ENSG00000115368.10	ENST00000475596.1	552	4	-6	0	0	0	multi-exon	FALSE	canonical	3	468	junction_3	26.8369562771605	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGTATGAATTCTGAAAT	-12	True	NA	NA	False	TTTAAA	-35	NA	189441461	189452049	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_189441579_189448378_189448509_189450902_189450969_189451804
H1_mix_00053173	chr2	+	706	5	FSM	ENSG00000115368.10	ENST00000472286.5	706	5	0	0	0	0	multi-exon	FALSE	canonical	3	427	junction_4	38.4252521136817	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATCCTTATTTTTGTGTG	-12	True	NA	NA	False	NA	NA	NA	189441461	189455621	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_189441579_189448378_189448509_189450902_189450969_189451804_189451896_189455319
H1_mix_00053174	chr2	+	4317	21	FSM	ENSG00000115368.10	ENST00000427960.5	4297	21	-20	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	103.429976312479	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGATAATATGAACATGTAT	-12	True	NA	26	True	AATAAA	-29	NA	189441461	189475552	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_189441579_189448378_189448509_189449244_189450969_189451804_189451896_189455319_189455445_189457310_189457382_189458752_189458873_189459335_189459425_189462483_189462643_189463693_189463754_189463845_189463962_189465078_189465255_189466424_189466583_189467467_189467649_189468474_189468570_189469343_189469440_189470075_189470246_189470818_189470879_189474185_189474333_189474716_189474809_189475212
H1_mix_00053175	chr2	+	2671	21	NNC	ENSG00000115368.10	novel	2647	21	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_20	105.548140675239	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGATAATATGAACATGTA	5	True	NA	25	True	AATAAA	-28	NA	189441478	189475551	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_189441579_189448378_189448509_189450902_189450969_189451804_189451896_189455319_189455445_189457310_189457382_189458752_189458873_189459335_189459425_189462483_189462643_189463693_189463754_189463845_189463962_189465078_189465255_189466424_189466583_189467467_189467649_189468474_189468570_189469343_189469440_189470075_189470246_189470818_189470879_189474185_189474333_189474716_189474809_189475182
H1_mix_00053176	chr2	+	427	2	FSM	ENSG00000115368.10	ENST00000498365.1	677	2	0	250	0	-250	multi-exon	FALSE	canonical	3	465	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGATTTTGATCATTAGC	NA	False	NA	NA	False	GATAAA	-13	NA	189462483	189463961	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_189462643_189463693
H1_mix_00053177	chr2	+	544	2	FSM	ENSG00000253559.1	ENST00000521819.1	544	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGGAACTTTATTAGTATA	7814	False	NA	NA	False	NA	NA	NA	189762820	189765226	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_189762993_189764854
H1_mix_00053181	chr2	+	4631	7	ISM	ENSG00000151690.15	ENST00000392328.6	4796	8	7012	-59	7012	58	3prime_fragment	FALSE	canonical	3	6	junction_1	9.29157324317757	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCCCAGGCTGGTAATCA	6505	False	NA	NA	False	NA	NA	NA	190415366	190502373	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_190415414_190435976_190437562_190469757_190469856_190488656_190488819_190489767_190489867_190497438_190497720_190500014
H1_mix_00053184	chr2	+	4111	8	NIC	ENSG00000138386.17	novel	4508	10	NA	NA	-25	-2	intron_retention	FALSE	canonical	1	2	junction_1	33.1311555697618	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATTTATGTTTATAGCAT	150	False	NA	12	True	AATAAA	-17	NA	190649044	190692764	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_190649361_190659276_190659996_190670325_190670460_190673100_190673153_190683737_190683828_190685475_190685639_190687200_190687318_190690244
H1_mix_00053185	chr2	+	4263	6	FSM	ENSG00000138386.17	ENST00000434473.1	1661	6	-1110	-1492	-339	-1	multi-exon	FALSE	canonical	1	2	junction_3	39.1172596177186	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTATGTTTATAGCATT	8917	False	NA	13	True	AATAAA	-18	NA	190658719	190692765	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_190659996_190670325_190670460_190673100_190673153_190685475_190685639_190687200_190687318_190690244
H1_mix_00053187	chr2	+	413	5	FSM	ENSG00000115419.13	ENST00000468352.5	413	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	154.227713138722	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAATCTAATTATGTAAAT	839	False	NA	NA	False	NA	NA	NA	190920044	190924592	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_190920249_190921023_190921057_190921144_190921204_190923916_190923984_190924542
H1_mix_00053189	chr2	+	5401	4	FSM	ENSG00000115419.13	ENST00000409626.5	997	4	-2123	-2281	-2123	0	multi-exon	FALSE	canonical	3	302	junction_3	55.0696528649552	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATTGTTTTTTTTGTTT	3852	False	NA	16	True	AATAAA	-16	NA	190924880	190935289	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_190927483_190930436_190930569_190931544_190931638_190932715
H1_mix_00053191	chr2	+	4933	31	FSM	ENSG00000128641.19	ENST00000304164.8	4933	31	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	99.9728907698927	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTATTGGTGCAGG	49	False	NA	17	True	CATAAA	-17	NA	191245527	191425389	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_191245612_191276886_191277031_191296110_191296227_191329934_191330030_191341460_191341566_191346235_191346283_191350161_191350226_191360630_191360730_191362267_191362372_191363727_191363876_191364157_191364277_191369541_191369629_191370226_191370293_191381461_191381567_191383279_191383343_191385883_191386085_191387223_191387451_191390291_191390493_191392107_191392202_191393072_191393223_191396428_191396498_191400381_191400469_191400748_191400836_191402631_191402719_191408114_191408190_191409043_191409179_191411065_191411173_191414047_191414181_191414516_191414670_191416114_191416243_191423836
H1_mix_00053192	chr2	+	4762	29	FSM	ENSG00000128641.19	ENST00000392316.5	4764	29	2	0	2	0	multi-exon	FALSE	canonical	3	80	junction_21	94.7336962980212	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTATTGGTGCAGG	NA	False	NA	17	True	CATAAA	-17	NA	191276886	191425389	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_191277031_191296110_191296227_191329934_191330030_191341460_191341566_191346235_191346283_191350161_191350226_191360630_191360730_191362267_191362372_191363727_191363876_191364157_191364277_191369541_191369629_191370226_191370293_191381461_191381567_191383279_191383343_191385883_191386085_191387223_191387451_191390291_191390493_191392107_191392202_191393072_191393223_191396428_191396498_191400381_191400469_191402631_191402719_191408114_191408190_191409043_191409179_191411065_191411173_191414047_191414181_191414516_191414670_191416114_191416243_191423836
H1_mix_00053193	chr2	+	3647	24	NIC	ENSG00000144395.18	novel	3597	28	NA	NA	0	0	intron_retention	FALSE	canonical	3	22	junction_1	17.7156707620176	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATAGGAGATGGTGTTGC	-2	True	NA	31	True	AATAAA	-19	NA	196639714	196732792	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_196639779_196646340_196646505_196656632_196656854_196656957_196657137_196658791_196658861_196669832_196669877_196672344_196672438_196674240_196674349_196676142_196676268_196676553_196676732_196677114_196677193_196677292_196677362_196701108_196701181_196712144_196712253_196718502_196718632_196719496_196719667_196720574_196720669_196721521_196721692_196725972_196726100_196729192_196729862_196729956_196730119_196730858_196730946_196732032_196732153_196732445
H1_mix_00053194	chr2	+	3529	22	NIC	ENSG00000144395.18	novel	3597	28	NA	NA	32	0	intron_retention	FALSE	canonical	3	11	junction_17	19.6520757588773	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGATGGTGTTGCATAATT	30	True	NA	37	True	AATAAA	-25	NA	196639746	196732798	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_196639779_196656632_196657137_196658791_196658861_196669832_196669877_196672344_196672438_196674240_196674349_196676142_196676268_196676553_196676732_196677114_196677193_196677292_196677362_196701108_196701181_196712144_196712253_196718502_196718632_196719496_196720235_196720574_196720669_196721521_196721692_196725972_196726100_196729792_196729862_196729956_196730119_196730858_196730946_196732032_196732153_196732445
H1_mix_00053195	chr2	+	710	7	FSM	ENSG00000144395.18	ENST00000495513.1	710	7	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	14.1303455961511	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTCCAGGCACATCTGTA	NA	False	NA	NA	False	AATGAA	-28	NA	196656744	196676250	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_196656854_196656957_196657137_196658791_196658861_196669832_196669877_196672344_196672438_196674240_196674349_196676142
H1_mix_00053196	chr2	+	2862	23	NIC	ENSG00000144395.18	novel	3597	28	NA	NA	23	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_3	23.298325765408	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTGTTGCATAATTCTT	NA	False	NA	40	True	AATAAA	-28	NA	196656767	196732801	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_196656854_196656957_196657137_196658791_196658861_196665566_196665684_196666718_196666849_196669832_196669877_196672344_196672438_196674240_196674349_196676142_196676268_196676553_196676732_196677292_196677362_196701108_196701181_196712144_196712253_196718502_196718632_196719496_196719667_196720574_196720669_196721521_196721692_196725972_196726100_196729792_196729862_196729956_196730119_196730858_196730946_196732032_196732153_196732445
H1_mix_00053198	chr2	+	2614	11	FSM	ENSG00000144395.18	ENST00000448409.5	2614	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	24.2827098981971	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAGGAGATGGTGTTGCA	14	False	NA	32	True	AATAAA	-20	NA	196713145	196732793	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_196713684_196718502_196718632_196719496_196719667_196720574_196720669_196721521_196721692_196725972_196726100_196729192_196729862_196729956_196730119_196730858_196730946_196732032_196732153_196732445
H1_mix_00053205	chr2	+	887	3	Antisense	novelGene_ENSG00000162944.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_2	5.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAAACTGTGATGTTCT	NA	False	NA	NA	False	ATTAAA	-17	NA	197578670	197587812	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_+_197578923_197580468_197580643_197587351
H1_mix_00053207	chr2	+	2581	1	FSM	ENSG00000225953.4	ENST00000668832.1	1663	1	-924	6	-924	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAATATTTGTTTGGTTT	13	True	NA	0	True	AATAAA	-14	NA	199458835	199461416	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_199458800_199461400
H1_mix_00053210	chr2	+	612	5	FSM	ENSG00000196141.14	ENST00000444012.5	605	5	-7	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	543.591931047546	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCAATAATGAAATAGTCC	26	False	NA	NA	False	NA	NA	NA	200306275	200412342	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_200306602_200329430_200329481_200372108_200372252_200389222_200389284_200412310
H1_mix_00053215	chr2	+	690	1	FSM	ENSG00000201649.1	ENST00000364779.1	95	1	-597	2	-597	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	289	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AACAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ACTAAA	-40	NA	200372577	200373267	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_200372600_200373300
H1_mix_00053216	chr2	+	640	4	FSM	ENSG00000163535.18	ENST00000418045.5	640	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	94.0460879923597	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTGAATTTTGAGAACACA	0	True	NA	NA	False	AAAAAG	-10	NA	200510007	200535124	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_200510267_200526135_200526253_200532973_200533109_200534995
H1_mix_00053217	chr2	+	1040	6	FSM	ENSG00000163535.18	ENST00000409203.3	1041	6	0	1	0	-1	multi-exon	FALSE	canonical	3	185	junction_5	6.16441400296898	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTTTCTCAATATCTTAG	0	True	NA	NA	False	AATAAA	-12	NA	200526166	200570141	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_200526253_200532973_200533109_200534995_200535172_200536064_200536143_200542578_200542665_200569662
H1_mix_00053218	chr2	+	4211	10	NNC	ENSG00000163535.18	novel	4478	9	NA	NA	28	-292	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	75.4243959616041	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTAGGCTGTCTTGTTTTG	68	False	NA	37	True	AATAAA	-38	NA	200526234	200583804	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_200526253_200532302_200532356_200532973_200533109_200534995_200535172_200536064_200536143_200542578_200542665_200569662_200569893_200571049_200573978_200575310_200575462_200583448
H1_mix_00053220	chr2	+	1059	7	FSM	ENSG00000082153.18	ENST00000452206.5	1059	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	817.635140036326	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTAACTTTTTTTCATT	-21	True	NA	NA	False	NA	NA	NA	200811545	200818083	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_200811947_200813207_200813282_200815340_200815518_200815666_200815762_200816324_200816391_200817105_200817242_200817973
H1_mix_00053223	chr2	+	1679	8	FSM	ENSG00000196290.17	ENST00000409357.5	1679	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	188.746563693548	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGATTGAATAAAATCTG	-14	True	NA	-7	True	ATTAAA	-27	NA	200889414	200903896	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_200889653_200890522_200890586_200891917_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
H1_mix_00053224	chr2	+	1332	5	NIC	ENSG00000196290.17	novel	1821	9	NA	NA	5	1867	intron_retention	FALSE	canonical	3	14	junction_1	161.044248577837	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGCCTACTGTTAACATT	-9	True	NA	NA	False	AATATA	-18	NA	200889419	200897240	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_200889653_200891735_200892380_200893245_200893409_200895263_200895391_200897075
H1_mix_00053225	chr2	+	4743	5	NIC	ENSG00000196290.17	novel	1689	7	NA	NA	1	0	intron_retention	FALSE	canonical	3	344	junction_1	56.3959218383741	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTTGGAAGGAGCTCA	19	False	NA	22	True	AATAAA	-15	NA	200889447	200903925	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
H1_mix_00053227	chr2	+	1197	6	FSM	ENSG00000003402.21	ENST00000341222.10	1283	6	86	0	14	0	multi-exon	FALSE	canonical	1	2	junction_1	45.9190592238125	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATTTGTTTTTTTACT	7	False	NA	21	True	AATAAA	-17	NA	201116252	201141598	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_201116482_201129728_201130147_201133028_201133135_201135971_201136108_201140356_201140440_201141373
H1_mix_00053230	chr2	+	2127	10	FSM	ENSG00000003402.21	ENST00000423241.6	2128	10	1	0	1	0	multi-exon	FALSE	canonical	2	7	junction_1	40.9184675623895	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTAGCTGGGTGTGGG	916	False	NA	1	True	AGTAAA	-6	NA	201118491	201164110	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_201118902_201129728_201130147_201133028_201133135_201135971_201136108_201140356_201140440_201145377_201145433_201149002_201149053_201149753_201149836_201160431_201160943_201163834
H1_mix_00053231	chr2	+	4734	4	FSM	ENSG00000003402.21	ENST00000461820.5	830	4	-315	-3589	-1	-7	multi-exon	FALSE	canonical	2	5	junction_3	51.1924473596122	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTATACTTTGCGTCT	-6	True	NA	10	True	NA	NA	NA	201129327	201139870	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_201130147_201133028_201133135_201135971_201136108_201136197
H1_mix_00053232	chr2	+	2114	9	ISM	ENSG00000003402.21	ENST00000423241.6	2128	10	10841	0	3	0	3prime_fragment	FALSE	canonical	3	17	junction_8	39.1214055856893	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTAGCTGGGTGTGGG	-2	True	NA	1	True	AGTAAA	-6	NA	201129331	201164110	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_201130147_201133028_201133135_201135971_201136108_201140356_201140440_201145377_201145433_201149002_201149053_201149753_201149836_201160431_201160943_201163834
H1_mix_00053237	chr2	+	1609	9	FSM	ENSG00000064012.23	ENST00000392263.6	1630	9	21	0	1	0	multi-exon	FALSE	canonical	2	3	junction_5	8.24621125123532	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCTATTTTGTTTGTTT	-2	True	NA	NA	False	AAGAAA	-26	NA	201233463	201286594	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_201233555_201234015_201234113_201266460_201266792_201271515_201271622_201272637_201272777_201274888_201274954_201276826_201276969_201284815_201285318_201286458
H1_mix_00053238	chr2	+	2830	10	NIC	ENSG00000064012.23	novel	1906	10	NA	NA	1	-7	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	6.41949192251302	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTATTGCTCCTTGGAG	-2	True	NA	0	True	AATAAA	-10	NA	201233463	201287702	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_201233623_201234015_201234113_201266460_201266792_201271515_201271622_201272637_201272777_201272897_201272943_201274888_201274954_201276826_201276969_201284815_201285318_201286458
H1_mix_00053241	chr2	+	2021	12	NIC	ENSG00000082146.13	novel	2222	12	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_9	99.9590825378974	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATGCTTTTATTTATTT	-5	True	NA	27	True	AATAAA	-16	NA	201451734	201480846	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_201451939_201454745_201454853_201458783_201458865_201469952_201470053_201472954_201473077_201474646_201474756_201475618_201475743_201477618_201477791_201478086_201478192_201478562_201478602_201479488_201479532_201480031
H1_mix_00053244	chr2	+	1024	1	FSM	ENSG00000230799.1	ENST00000448547.1	837	1	-166	-21	-166	21	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGTGAAGTAAGCCTAA	NA	False	NA	NA	False	AAGAAA	-2	NA	201762570	201763594	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_201762600_201763600
H1_mix_00053245	chr2	+	3802	3	Intergenic	novelGene_751	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0.5	163	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGGCCACTGTGTTTCTT	0	True	NA	NA	False	ATTAAA	-19	NA	201970944	201983944	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_201971079_201972606_201972749_201980418
H1_mix_00053247	chr2	+	891	5	FSM	ENSG00000055044.11	ENST00000488403.5	871	5	-18	-2	-18	2	multi-exon	FALSE	canonical	3	1028	junction_3	126.451571757729	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCTTAAAACCTCATCAAA	NA	False	NA	NA	False	NA	NA	NA	202265717	202284714	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_202265987_202275112_202275190_202277949_202278003_202282350_202282473_202284344
H1_mix_00053251	chr2	+	291	1	FSM	ENSG00000227454.2	ENST00000450281.1	899	1	313	295	313	-295	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCGGCCCCTACAGACTT	NA	False	NA	NA	False	NA	NA	NA	202618295	202618586	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_202618300_202618600
H1_mix_00053252	chr2	+	5721	9	NNC	ENSG00000138439.12	novel	5982	8	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	46.2478040019199	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTTTCTGTGAATTTTT	-31	True	NA	21	True	AATAAA	-16	NA	202634961	202769757	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_202635345_202635612_202635789_202695880_202696033_202724916_202725010_202726249_202726364_202755537_202755682_202757212_202757439_202759232_202759354_202765445
H1_mix_00053253	chr2	+	5698	9	NNC	ENSG00000138439.12	novel	5982	8	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	46.2478040019199	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTTTCTGTGAATTTTT	-12	True	NA	21	True	AATAAA	-16	NA	202634980	202769757	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_202635343_202635614_202635789_202695880_202696033_202724916_202725010_202726249_202726364_202755537_202755682_202757212_202757439_202759232_202759354_202765445
H1_mix_00053254	chr2	+	2878	8	FSM	ENSG00000138380.18	ENST00000444724.5	2854	8	-24	0	13	0	multi-exon	FALSE	canonical	3	9	junction_1	4.84030695602783	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCGGGCGAGGTGGCGG	NA	False	NA	NA	False	AATACA	-6	NA	202912230	202963168	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_202912325_202917876_202918044_202941859_202941981_202942739_202942968_202952558_202952680_202954004_202954135_202955673_202955759_202961236
H1_mix_00053256	chr2	+	1296	1	FSM	ENSG00000232479.2	ENST00000449849.2	1296	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	403	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAGCTCGGCCTGCGAAG	NA	False	NA	NA	False	NA	NA	NA	202924608	202925904	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_202924600_202925900
H1_mix_00053257	chr2	+	1499	5	ISM	ENSG00000144426.19	ENST00000414576.6	2240	18	7882	26129	-5764	0	internal_fragment	FALSE	canonical	2	5	junction_2	1.6583123951777	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATCAAATTATAGAATATT	NA	False	NA	34	True	AATAAA	-34	NA	203175191	203191335	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_203175288_203180381_203180513_203183278_203183389_203188471_203188590_203190291
H1_mix_00053260	chr2	+	828	7	FSM	ENSG00000119004.17	ENST00000443941.1	804	7	-24	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	59.801523577767	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTAAGAACACAATAAAAAGA	-12	True	NA	NA	False	NA	NA	NA	203239010	203285732	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_203239135_203245845_203245896_203246754_203246922_203251966_203252110_203266513_203266682_203280058_203280114_203285611
H1_mix_00053264	chr2	+	428	2	FSM	ENSG00000138443.17	ENST00000494215.1	717	2	0	289	0	173	multi-exon	FALSE	canonical	3	513	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTTAACTCACATGTAC	28	False	NA	NA	False	AATAAA	-36	NA	203328457	203367130	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_203328632_203366876
H1_mix_00053270	chr2	+	2344	12	FSM	ENSG00000118246.14	ENST00000403094.3	2344	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	122.51476551255	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCAACCTTTTCATATT	5	True	NA	-3	True	AATAAA	-4	NA	206765605	206791806	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_206765763_206766643_206767471_206770090_206770195_206771181_206771291_206771893_206772018_206772180_206772321_206774224_206774398_206786732_206786900_206787936_206788156_206788818_206788904_206790571_206790687_206791682
H1_mix_00053271	chr2	+	354	1	FSM	ENSG00000277590.1	ENST00000618396.1	99	1	33	-288	33	288	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTCCCGAACTCCCCACG	6	False	NA	NA	False	AAAACA	-22	NA	207166432	207166786	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_207166400_207166800
H1_mix_00053273	chr2	+	2005	8	FSM	ENSG00000118260.15	ENST00000430624.5	2005	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	76.6401610496369	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACGACAAAGCATGGTATT	-3	True	NA	14	True	ATTAAA	-15	NA	207529736	207597789	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_207530019_207555627_207555750_207560225_207560373_207567462_207567564_207570178_207570322_207575271_207575455_207577504_207577656_207596913
H1_mix_00053281	chr2	+	5297	11	FSM	ENSG00000078018.21	ENST00000392194.5	5303	11	0	6	0	0	multi-exon	FALSE	canonical	1	1	junction_8	7.3729234364667	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTAGTTTTGGTTTCAGA	5	True	NA	16	True	AATAAA	-17	NA	209580040	209734112	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_209580101_209625052_209625130_209653141_209653433_209678571_209678686_209680749_209680828_209700276_209700339_209705579_209705728_209709913_209710255_209725708_209725791_209729849_209729963_209730181
H1_mix_00053282	chr2	+	2851	7	FSM	ENSG00000197713.15	ENST00000438265.5	668	7	-59	-2124	-4	0	multi-exon	TRUE	canonical	2	9	junction_6	260.642795155874	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAAGAGGTCAGAAATTG	NA	False	NA	17	True	ATTAAA	-18	NA	210002579	210019940	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_210002784_210009656_210009737_210015972_210016113_210016203_210016258_210016506_210016642_210017472_210017560_210017789
H1_mix_00053284	chr2	+	515	5	FSM	ENSG00000197713.15	ENST00000441588.5	496	5	-19	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	302.748554909846	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAGTAGGTCCTGACACT	-8	True	NA	NA	False	NA	NA	NA	210002623	210017521	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_210002784_210003437_210003469_210015972_210016113_210016506_210016642_210017472
H1_mix_00053287	chr2	+	5661	40	FSM	ENSG00000021826.18	ENST00000673510.1	4880	40	0	-781	0	0	multi-exon	FALSE	canonical	0	0	junction_2	9.71859141369796	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGAACTATGGGGTCCCA	-5	True	NA	NA	False	NA	NA	NA	210477681	210678923	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_210477767_210519550_210519671_210556718_210556860_210573297_210573408_210576345_210576491_210577420_210577511_210579713_210579771_210582616_210582710_210588057_210588148_210590105_210590235_210590799_210590907_210591830_210591970_210592878_210592957_210594507_210594607_210595486_210595583_210599371_210599562_210600554_210600713_210602201_210602331_210605101_210605247_210606730_210606942_210608360_210608560_210612116_210612294_210616422_210616542_210637701_210637844_210639149_210639216_210639995_210640060_210642483_210642666_210647862_210648058_210648472_210648541_210650362_210650439_210654024_210654103_210656524_210656633_210658598_210658689_210660484_210660656_210663122_210663198_210668185_210668285_210674901_210674962_210675727_210675841_210677006_210677137_210677886
H1_mix_00053288	chr2	+	1255	1	FSM	ENSG00000270659.1	ENST00000604818.1	690	1	-628	63	-628	-63	mono-exon	FALSE	NA	NA	NA	NA	NA	653	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTGTACTGTTACAGAGA	409	False	NA	-48	True	NA	NA	NA	213152341	213153596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_213152300_213153600
H1_mix_00053290	chr2	+	6570	1	Intergenic	novelGene_762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGATTCATGCGACAATAC	NA	False	NA	28	True	CATAAA	-39	NA	215922594	215929164	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_215922600_215929200
H1_mix_00053291	chr2	+	3360	3	FSM	ENSG00000163449.11	ENST00000295658.8	3342	3	-24	6	5	-5	multi-exon	FALSE	canonical	1	1	junction_1	6	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCATTTTGTCTTTGAGG	NA	False	NA	9	True	AATAAA	-21	NA	216081870	216102777	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_216081976_216095837_216096235_216099919
H1_mix_00053295	chr2	+	2082	2	FSM	ENSG00000197756.10	ENST00000478153.1	2082	2	0	0	0	0	multi-exon	FALSE	canonical	3	12844	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAACAAAATTGCCTTGG	11	False	NA	6	True	AATAAA	-12	NA	216498824	216501456	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_216499399_216499948
H1_mix_00053297	chr2	+	775	4	FSM	ENSG00000197756.10	ENST00000598925.5	775	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	6050.47840165461	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTTGGTGTTTGGATTT	0	True	NA	33	True	AATAAA	-23	NA	216499085	216529587	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_216499399_216499948_216500032_216520713_216520775_216529269
H1_mix_00053298	chr2	+	6349	1	FSM	ENSG00000197756.10	ENST00000624436.1	559	1	-5790	0	-5790	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTGCTTTGGTGTTTGG	NA	False	NA	29	True	AATAAA	-19	NA	216523234	216529583	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_216523200_216529600
H1_mix_00053299	chr2	+	945	2	FSM	ENSG00000115457.10	ENST00000490362.1	4414	2	-64	3533	-55	-1017	multi-exon	FALSE	canonical	3	5164	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCTTTCCACAAACATAG	NA	False	NA	NA	False	NA	NA	NA	216633364	216660900	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_216633966_216660556
H1_mix_00053304	chr2	+	2992	1	FSM	ENSG00000261338.2	ENST00000562328.2	2048	1	-962	18	-962	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCTGTTACATCATAAGC	134	False	NA	-8	True	NA	NA	NA	218254356	218257348	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_218254400_218257300
H1_mix_00053306	chr2	+	2525	7	FSM	ENSG00000144579.8	ENST00000273062.7	2525	7	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_2	14.5028732785381	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTTCTGTGGTTATTG	-6	True	NA	29	True	ACTAAA	-19	NA	218399867	218405941	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_218400158_218401563_218401713_218402110_218402216_218402348_218402406_218403034_218403128_218403231_218403418_218404296
H1_mix_00053307	chr2	+	1265	6	FSM	ENSG00000144579.8	ENST00000497677.5	998	6	0	-267	0	267	multi-exon	FALSE	canonical	3	16	junction_1	9.96794863550169	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTGTGCCACTGCACTC	-10	True	NA	NA	False	NA	NA	NA	218400070	218404008	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_218400158_218401563_218401713_218402113_218402216_218402348_218402406_218403034_218403128_218403231
H1_mix_00053309	chr2	+	1451	9	FSM	ENSG00000127831.11	ENST00000440053.1	1454	9	3	0	3	0	multi-exon	FALSE	canonical	3	45	junction_2	4.84606799374503	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCATGCCTGTAACCCCA	24	False	NA	NA	False	AATAAA	-16	NA	218423767	218431216	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_218423854_218424276_218424352_218425614_218425812_218427964_218428074_218428226_218428338_218429284_218429488_218429596_218429676_218429848_218429948_218430724
H1_mix_00053310	chr2	+	1483	9	FSM	ENSG00000074582.15	ENST00000439945.5	1483	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	60.3629646389241	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTCCTCCTCTAGCTCA	5	False	NA	-24	True	NA	NA	NA	218659759	218663404	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_218659801_218660306_218660422_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
H1_mix_00053312	chr2	+	1466	8	ISM	ENSG00000074582.15	ENST00000392110.6	1525	9	323	29	0	0	3prime_fragment	FALSE	canonical	2	11	junction_1	55.248603269814	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCTAGCTCAATAAACATC	282	False	NA	-15	True	NA	NA	NA	218660036	218663413	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_218660167_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
H1_mix_00053315	chr2	+	5168	26	NIC	ENSG00000163482.12	novel	4873	27	NA	NA	3	0	intron_retention	FALSE	canonical	3	70	junction_1	22.2507887500646	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAAGATCCTGGTCTGGC	14	True	NA	4	True	NA	NA	NA	218672073	218702709	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_218672216_218672740_218672914_218673624_218673766_218673878_218673957_218675342_218675474_218676028_218676279_218679167_218679262_218679559_218679730_218679892_218680081_218680602_218680703_218685084_218685229_218688696_218688877_218689858_218689957_218690449_218690556_218692142_218692711_218693239_218693345_218693722_218693822_218693894_218693984_218694263_218694328_218694524_218694636_218696526_218696602_218697038_218697214_218697462_218697611_218697853_218698002_218698601_218699349_218701865
H1_mix_00053325	chr2	+	2491	1	FSM	ENSG00000171450.6	ENST00000302625.6	2490	1	4	-5	4	5	mono-exon	FALSE	NA	NA	NA	NA	NA	737	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGCGCCGGTCTTTCTTT	12	True	NA	17	True	TATAAA	-24	NA	218959669	218962160	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_218959700_218962200
H1_mix_00053330	chr2	+	1725	6	FSM	ENSG00000158552.13	ENST00000464902.5	1851	6	125	1	-8	-1	multi-exon	FALSE	canonical	3	152	junction_2	11.0526015037185	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAAGTGGTGTGTTTCTCT	287	False	NA	NA	False	AATAAA	-24	NA	219207209	219209646	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219207422_219207647_219207780_219207886_219208039_219208255_219208349_219208425_219208487_219208571
H1_mix_00053331	chr2	+	664	2	FSM	ENSG00000163516.14	ENST00000464763.5	647	2	-17	0	-17	0	multi-exon	FALSE	canonical	3	275	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAGAGTCTCGCTCTGT	425	False	NA	NA	False	NA	NA	NA	219229765	219230756	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219229901_219230227
H1_mix_00053334	chr2	+	3018	13	NIC	ENSG00000163516.14	novel	2540	14	NA	NA	-1	0	intron_retention	FALSE	canonical	1	67	junction_5	64.0951441218444	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTACTTGTACTTACATT	2	True	NA	38	True	AATAAA	-14	NA	219229836	219236651	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_219229901_219230227_219230406_219231927_219232041_219232259_219232363_219232489_219232684_219233078_219233192_219233285_219233434_219233714_219233944_219234132_219235313_219235473_219235586_219235707_219235876_219236009_219236096_219236321
H1_mix_00053341	chr2	+	873	2	FSM	ENSG00000163516.14	ENST00000460966.1	873	2	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTACTTGTACTTACATT	5706	False	NA	38	True	AATAAA	-14	NA	219235644	219236651	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219235876_219236009
H1_mix_00053343	chr2	+	4110	11	NIC	ENSG00000072195.15	novel	3379	11	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_4	25.1994047548747	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGTCCAGTTTGTACCT	120	False	NA	-9	True	NA	NA	NA	219442026	219466841	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_219442084_219443107_219444060_219444652_219444743_219444824_219444985_219447973_219449272_219451135_219451280_219451624_219451808_219461881_219462058_219462297_219462387_219464432_219464609_219466056
H1_mix_00053347	chr2	+	1384	12	NIC	ENSG00000144591.20	novel	1522	13	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	87.9248364201159	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCACAGACTGTACTTATG	25	True	NA	19	True	AATAAA	-19	NA	219498913	219506991	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_219498939_219500177_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
H1_mix_00053352	chr2	+	705	5	FSM	ENSG00000144589.22	ENST00000447191.1	705	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	37.4791608764124	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTGGTCCCCATGAGCC	175	False	NA	NA	False	NA	NA	NA	219613915	219615995	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219613931_219614160_219614243_219614475_219614547_219615093_219615342_219615706
H1_mix_00053354	chr2	+	3936	23	FSM	ENSG00000114923.17	ENST00000425141.5	3936	23	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_10	16.0953383734351	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGAAGACAGTGCCCCT	-8	True	NA	NA	False	NA	NA	NA	219627626	219641728	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219627746_219627899_219628044_219628404_219628571_219629143_219629422_219629579_219629696_219630152_219630353_219631967_219632117_219632261_219632443_219632873_219633010_219633273_219633458_219633854_219633980_219634419_219634605_219635270_219635497_219635672_219635892_219636301_219636451_219636679_219636875_219637580_219637812_219638163_219638254_219638702_219638870_219639481_219639736_219640429_219640600_219640788_219640963_219641650
H1_mix_00053359	chr2	+	718	1	FSM	ENSG00000226539.1	ENST00000446594.1	718	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAGTTCTTGTAAACCTG	NA	False	NA	NA	False	NA	NA	NA	223704620	223705338	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_223704600_223705300
H1_mix_00053360	chr2	+	409	2	Intergenic	novelGene_769	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTATTCCCACCTGCCCA	4254	False	NA	NA	False	NA	NA	NA	224225748	224228018	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_224225877_224227737
H1_mix_00053361	chr2	+	9440	8	NIC	ENSG00000144468.17	novel	5061	9	NA	NA	-2442	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	53.9270103842183	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGCTCATTTATACTGT	NA	False	NA	NA	False	AATAAA	-23	NA	226833138	226999210	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_226837771_226838072_226838155_226864603_226865127_226867185_226867319_226906792_226906882_226908821_226908879_226914207_226914352_226995430
H1_mix_00053362	chr2	+	598	3	FSM	ENSG00000144468.17	ENST00000448992.5	576	3	-22	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	0.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTGCCGAATTTATGGA	-38	True	NA	NA	False	NA	NA	NA	226836033	226865065	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_226836088_226838072_226838155_226864603
H1_mix_00053366	chr2	+	1259	9	FSM	ENSG00000168958.20	ENST00000409616.5	1247	9	-12	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	242.419058656699	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCTGGAAATATAAAAGATT	-17	True	NA	-3	True	NA	NA	NA	227325249	227357151	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_227325428_227328677_227328790_227329605_227329784_227330625_227330847_227332418_227332589_227340291_227340381_227352513_227352574_227355676_227355762_227356985
H1_mix_00053370	chr2	+	487	1	FSM	ENSG00000235993.1	ENST00000428736.1	355	1	162	-294	162	294	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGATCACTTGAGCCATA	NA	False	NA	NA	False	NA	NA	NA	229701955	229702442	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_229702000_229702400
H1_mix_00053371	chr2	+	3108	5	FSM	ENSG00000153832.12	ENST00000373652.7	3120	5	12	0	12	0	multi-exon	FALSE	canonical	0	0	junction_1	80.2788110275682	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGCCATAATAATCTGAGT	NA	False	NA	NA	False	ATTAAA	-16	NA	229922313	230013109	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_229922610_229932770_229932887_229976240_229976350_229996750_229996924_230010695
H1_mix_00053374	chr2	+	3076	2	FSM	ENSG00000204128.6	ENST00000463834.1	3141	2	-10	75	-10	-75	multi-exon	FALSE	canonical	3	12	junction_1	0	294	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGACTTGAATTGATAAT	3199	False	NA	-36	True	NA	NA	NA	231041096	231049644	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231041410_231046881
H1_mix_00053375	chr2	+	4090	23	FSM	ENSG00000173692.14	ENST00000676506.1	4089	23	-1	0	-1	0	multi-exon	FALSE	canonical	3	1330	junction_11	93.7621066563039	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGTTTTACAGAGAACGTAT	-30	True	NA	NA	False	NA	NA	NA	231056862	231167229	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231153563_231153667_231161339_231161510_231163634_231163728_231165199_231165287_231165870
H1_mix_00053377	chr2	+	3415	26	FSM	ENSG00000173692.14	ENST00000677000.1	3411	26	-4	0	0	0	multi-exon	FALSE	canonical	2	4	junction_18	406.001371426255	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCCCACACCATGAAATGC	NA	False	NA	12	True	AATAAA	-12	NA	231056844	231172802	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231152716_231152812_231153563_231153667_231161339_231161510_231163634_231163728_231165199_231165287_231165870_231166018_231170565_231170722_231172534
H1_mix_00053381	chr2	+	2323	22	FSM	ENSG00000135931.19	ENST00000683165.1	2334	22	11	0	11	0	multi-exon	FALSE	canonical	0	0	junction_21	58.9591503152453	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTACTCGGGAGGCTGAGG	NA	False	NA	NA	False	AATACA	-40	NA	231198604	231346405	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231198699_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231331792_231331898_231344974_231345091_231346211
H1_mix_00053392	chr2	+	2272	16	FSM	ENSG00000135931.19	ENST00000683814.1	2261	16	-11	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	68.4499492735791	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTTAAGTCTCATTCTG	2	True	NA	-8	True	AATAGA	-3	NA	231198660	231278857	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231198942_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381
H1_mix_00053393	chr2	+	2294	21	FSM	ENSG00000135931.19	ENST00000683575.1	2333	21	0	39	0	0	multi-exon	FALSE	canonical	0	0	junction_1	59.6099614158573	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATTTTTAAAATTCAAAAT	21	False	NA	-23	True	NA	NA	NA	231198752	231345160	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231198942_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231331792_231331898_231344974
H1_mix_00053394	chr2	+	2246	12	NIC	ENSG00000135931.19	novel	2128	12	NA	NA	8	140	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	97.9367311369188	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTCTGCAGTTGTCTTT	54	False	NA	NA	False	AATAAA	-18	NA	231198712	231260144	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_231198946_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231259198
H1_mix_00053395	chr2	+	1792	4	FSM	ENSG00000187514.17_ENSG00000284378.1	ENST00000468027.5	621	4	-293	-878	-279	2	multi-exon	FALSE	canonical	3	22780	junction_2	1903.64078077305	465	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTTTTCTGTTTCAGTT	580	False	NA	16	True	NA	NA	NA	231708236	231713553	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231708752_231711347_231711420_231711889_231711984_231712442
H1_mix_00053396	chr2	+	820	5	FSM	ENSG00000144524.18	ENST00000409091.5	806	5	-14	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	411.047670593083	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACCAAGGGCCCATTTCC	-21	True	NA	NA	False	NA	NA	NA	231781670	231807695	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231781884_231794262_231794352_231796105_231796309_231798858_231798965_231807486
H1_mix_00053401	chr2	+	2973	1	FSM	ENSG00000261096.1	ENST00000563949.1	2507	1	-545	79	-545	-79	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTTCACCATTTTCTCT	1495	False	NA	NA	False	NA	NA	NA	231809300	231812273	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231809300_231812300
H1_mix_00053403	chr2	+	766	5	FSM	ENSG00000204120.16	ENST00000476995.5	766	5	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_4	50.5785280529199	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAGAACATGTTAACCTA	NA	False	NA	NA	False	NA	NA	NA	232697298	232736214	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_232697393_232703423_232703490_232734416_232734487_232735154_232735239_232735762
H1_mix_00053408	chr2	+	565	7	FSM	ENSG00000204120.16	ENST00000421433.5	564	7	-1	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	81.9898367685491	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGTAAATAGTGCTGCT	-3	True	NA	NA	False	NA	NA	NA	232697329	232756235	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_232697393_232703423_232703490_232731121_232731235_232735154_232735239_232747614_232747745_232748986_232749083_232756222
H1_mix_00053413	chr2	+	561	4	FSM	ENSG00000182600.9	ENST00000409533.5	561	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	2.82842712474619	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGCGCCTGTATGTCCGCG	NA	False	NA	23	True	AATAAA	-41	NA	232869013	232876406	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_232869102_232870284_232870415_232875939_232876123_232876246
H1_mix_00053414	chr2	+	4215	22	ISM	ENSG00000168918.14	ENST00000445964.6	4902	27	79385	0	17511	0	3prime_fragment	FALSE	canonical	3	11	junction_15	5.8554004376912	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGTGTGGCGTTTTT	9	True	NA	19	True	AATAAA	-19	NA	233139726	233207903	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_233139930_233146161_233146243_233146366_233146439_233147470_233147595_233158312_233158420_233161723_233161827_233163706_233163904_233164306_233164425_233169304_233169402_233170025_233170165_233170495_233170605_233171063_233171153_233177264_233177347_233182409_233182500_233184407_233184522_233185842_233185926_233189849_233189938_233193811_233193962_233195398_233195496_233198094_233198377_233204125_233204718_233206705
H1_mix_00053415	chr2	+	3313	19	FSM	ENSG00000085978.22	ENST00000392018.1	3313	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	43.9623857180737	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCTTGGTGATTATTTT	11	False	NA	28	True	AATAAA	-30	NA	233251713	233295674	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_233251943_233256101_233256196_233263129_233263236_233263991_233264066_233264891_233265144_233270001_233270068_233272965_233273053_233273720_233273778_233273990_233274042_233274675_233274779_233277567_233277674_233281104_233281176_233282681_233282754_233289853_233289975_233290247_233290354_233292127_233292278_233292386_233292435_233293255_233293358_233294256
H1_mix_00053418	chr2	+	10846	17	FSM	ENSG00000157985.19	ENST00000336665.9	5427	17	-180	-5239	-116	0	multi-exon	FALSE	canonical	3	39	junction_12	8.96869555732605	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGCTTCCGTGGAGTTGT	-10	True	NA	13	True	AATAAA	-19	NA	235493926	236131793	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_235494850_235709178_235709238_235717556_235717645_235740962_235741049_235744697_235744840_235750353_235750489_235797758_235797887_235799366_235799523_235807238_235807332_235883344_235883450_235908737_235908907_235968461_235968624_236036560_236036716_236040750_236040842_236049058_236049282_236120191_236120448_236123918
H1_mix_00053430	chr2	+	457	2	ISM	ENSG00000234949.2	ENST00000452801.1	1301	3	42	3710	42	265	5prime_fragment	FALSE	canonical	1	1	junction_1	0	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAAAATGGTTAAGAACCA	NA	False	NA	NA	False	ATTAAA	-3	NA	237591210	237592271	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_237591268_237591871
H1_mix_00053431	chr2	+	2313	13	NIC	ENSG00000124831.19	novel	3365	11	NA	NA	31	-1	combination_of_known_junctions	FALSE	canonical	3	314	junction_4	198.548902456465	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCAGCAATGTGGTTCT	-39	True	NA	14	True	ATTAAA	-16	NA	237692175	237780308	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_237692522_237708543_237708631_237748363_237748400_237749198_237749325_237751199_237751272_237753308_237753480_237756094_237756188_237760063_237760206_237769942_237769993_237772080_237772199_237772865_237772946_237774357_237774463_237779421
H1_mix_00053435	chr2	+	896	3	FSM	ENSG00000132329.11	ENST00000254661.5	823	3	-81	8	-81	-8	multi-exon	FALSE	canonical	2	3	junction_2	0.5	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTGAACTTGGAAAGACT	656	False	NA	-4	True	ATTAAA	-8	NA	237859541	237912098	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_237859728_237877223_237877363_237911527
H1_mix_00053440	chr2	+	823	8	FSM	ENSG00000184182.19	ENST00000433241.5	803	8	-20	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	150.281368758467	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATAGGCTGTTGGTGAAA	26	True	NA	11	True	NA	NA	NA	237967059	238041605	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_237967133_237973091_237973226_237987962_237987993_237994743_237994810_238016565_238016634_238025341_238025413_238035877_238035941_238041287
H1_mix_00053441	chr2	+	945	9	FSM	ENSG00000184182.19	ENST00000409953.5	924	9	-21	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	136.622598332048	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTGGATGCAAAATCTCT	26	True	NA	20	True	NA	NA	NA	237967059	238041770	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_237967133_237987962_237987993_237994743_237994810_238016565_238016634_238025341_238025413_238030555_238030614_238032221_238032255_238035877_238035941_238041287
H1_mix_00053442	chr2	+	1160	9	FSM	ENSG00000184182.19	ENST00000409332.5	1138	9	-22	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	137.967783830139	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAATTTGTACAATTCA	26	True	NA	24	True	NA	NA	NA	237967059	238041917	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_237967133_237973091_237973226_237987962_237987993_238016565_238016634_238025341_238025413_238030555_238030614_238032221_238032255_238035877_238035941_238041287
H1_mix_00053444	chr2	+	5664	11	FSM	ENSG00000132330.18	ENST00000480357.5	5668	11	4	0	4	0	multi-exon	FALSE	canonical	3	32	junction_5	161.2781448306	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGGGATCCTGTGGTTT	NA	False	NA	15	True	AATAAA	-16	NA	238060931	238099412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_238061144_238064356_238064470_238068064_238068166_238069296_238069478_238073782_238073848_238081708_238081837_238082044_238082210_238083247_238083355_238091217_238094523_238096800_238096877_238098201
H1_mix_00053448	chr2	+	2157	10	NIC	ENSG00000132330.18	novel	2450	12	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_2	133.738550911844	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGGATCCTGTGGTTTC	-12	True	NA	16	True	AATAAA	-17	NA	238061011	238099413	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_238061144_238064356_238064470_238081708_238081837_238082044_238082210_238083247_238083355_238091217_238091255_238093860_238093945_238094419_238094523_238096800_238096877_238098201
H1_mix_00053450	chr2	+	410	4	NIC	ENSG00000132330.18	novel	5668	11	NA	NA	-5	4036	combination_of_known_splicesites	FALSE	canonical	1	4	junction_3	210.05872194857	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTAGTATTTTTTCTC	14	True	NA	NA	False	AGTAAA	-21	NA	238061037	238073872	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_238061144_238064356_238064470_238068064_238068166_238073782
H1_mix_00053451	chr2	+	1446	10	ISM	ENSG00000132330.18	ENST00000254663.12	2450	12	43	4564	1	0	5prime_fragment	FALSE	canonical	3	290	junction_9	59.1528674570816	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTGGCAGTTTTAATT	20	True	NA	8	True	ATTAAA	-18	NA	238061043	238094849	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_238061144_238064356_238064470_238068064_238068166_238069296_238069478_238081708_238081837_238082044_238082210_238083247_238083355_238091217_238091255_238093860_238093945_238094419
H1_mix_00053454	chr2	+	3800	4	FSM	ENSG00000132330.18	ENST00000497951.1	3800	4	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_2	38.9101529166874	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGTGTCTCTTCTGA	NA	False	NA	20	True	TTTAAA	-13	NA	238078564	238091473	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_238081837_238082044_238082210_238083247_238083355_238091217
H1_mix_00053455	chr2	+	310	2	FSM	ENSG00000144488.15	ENST00000423032.1	476	2	80	86	80	-86	multi-exon	FALSE	canonical	3	4	junction_1	0	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGGATGGGCTGCCCT	39	False	NA	NA	False	NA	NA	NA	238127474	238128756	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_238127735_238128706
H1_mix_00053457	chr2	+	736	7	FSM	ENSG00000204104.12	ENST00000462122.1	922	7	185	1	185	-1	multi-exon	FALSE	canonical	3	100	junction_4	17.0465050181359	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGGGGTAGTAATGGGGA	2994	False	NA	NA	False	NA	NA	NA	238347367	238397679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_238347476_238348763_238348849_238349324_238349409_238352826_238352951_238353172_238353210_238356003_238356081_238397458
H1_mix_00053458	chr2	+	583	3	FSM	ENSG00000065802.12	ENST00000491653.1	818	3	235	0	235	0	multi-exon	FALSE	canonical	0	0	junction_2	68	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTCCTCCTGGCTGGCGC	6514	False	NA	NA	False	NA	NA	NA	238433548	238444474	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_238433696_238435710_238436014_238444341
H1_mix_00053459	chr2	+	324	1	FSM	ENSG00000265215.1	ENST00000578705.1	84	1	-250	10	-250	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGGGGCAAGAGGCTTTC	NA	False	NA	NA	False	NA	NA	NA	239305211	239305535	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_239305200_239305500
H1_mix_00053463	chr2	+	2320	12	FSM	ENSG00000142330.20	ENST00000391983.7	2320	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	67.0916481851381	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGCTCCAGGTAGTTCC	130	False	NA	18	True	AATAAA	-27	NA	240586870	240599109	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_240587053_240589342_240589475_240590814_240591012_240591932_240592151_240593905_240594048_240594542_240594710_240595023_240595305_240596318_240596522_240596849_240596943_240597887_240598088_240598351_240598398_240598650
H1_mix_00053468	chr2	+	1009	9	FSM	ENSG00000115685.15	ENST00000404405.7	1009	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	178.714113530521	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTACTTGTTTTTTTCTGT	738	False	NA	18	True	AATAAA	-19	NA	241150417	241167174	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241150548_241153475_241153605_241157806_241157863_241158483_241158532_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241167044
H1_mix_00053469	chr2	+	577	4	FSM	ENSG00000115685.15	ENST00000498170.5	561	4	-16	0	0	0	multi-exon	FALSE	canonical	3	496	junction_2	32.273139846559	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTCGGTTTCTGTGC	-13	True	NA	NA	False	GGGGCT	-41	NA	241150466	241158794	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241150548_241153475_241153605_241157806_241157863_241158483
H1_mix_00053482	chr2	+	3464	14	FSM	ENSG00000168385.18	ENST00000616972.4	3446	14	-18	0	-18	0	multi-exon	FALSE	canonical	0	0	junction_2	1411.51329258634	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTATTTCTCTTGGT	320	False	NA	NA	False	AATAAA	-20	NA	241315842	241354024	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241315983_241316421_241316556_241324215_241324242_241325992_241326114_241335125_241335213_241335974_241336099_241337381_241337517_241337672_241337791_241342991_241343094_241343751_241343898_241346165_241346250_241348133_241348192_241350072_241350204_241351966
H1_mix_00053483	chr2	+	3386	14	FSM	ENSG00000168385.18	ENST00000402092.6	3333	14	-56	3	-3	0	multi-exon	FALSE	canonical	3	27	junction_2	1434.56164056889	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTATTTCTCTTGGT	6	False	NA	NA	False	AATAAA	-20	NA	241315871	241354024	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241315983_241320202_241320288_241324215_241324242_241325992_241326114_241335125_241335213_241335974_241336099_241337381_241337517_241337672_241337791_241342991_241343094_241343751_241343898_241346165_241346250_241348133_241348192_241350072_241350204_241351966
H1_mix_00053502	chr2	+	821	7	FSM	ENSG00000168397.17	ENST00000425239.5	807	7	-14	0	0	0	multi-exon	FALSE	canonical	3	571	junction_1	88.6367430709309	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCGTTTATGAAGGCCCT	1	True	NA	NA	False	NA	NA	NA	241637692	241659448	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653511_241653611_241654545_241654648_241655270_241655344_241659107
H1_mix_00053505	chr2	+	3584	8	FSM	ENSG00000168395.16	ENST00000406941.5	946	8	-2080	-558	-2069	556	multi-exon	FALSE	canonical	0	0	junction_4	82.9177118520254	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCTGGGTTTCCGTGGG	NA	False	NA	NA	False	NA	NA	NA	241699965	241724594	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241702103_241704652_241704725_241709215_241709383_241711376_241711489_241711977_241712072_241722938_241723075_241723209_241723272_241723790
H1_mix_00053506	chr2	+	5372	8	NNC	ENSG00000168395.16	novel	351	2	NA	NA	415	0	intron_retention	FALSE	canonical	0	0	junction_4	82.4096289202634	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTGAAAGTGCATCTGTA	7	True	NA	NA	False	AATAAA	-22	NA	241702479	241729478	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_241702719_241704652_241704725_241709215_241709383_241711376_241711489_241711977_241712072_241722938_241723075_241723209_241723272_241724988
H1_mix_00053511	chr2	-	1854	4	NNC	ENSG00000184731.6	novel	552	2	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	1.88561808316413	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTATGTGCCCCTTTTGAC	NA	False	NA	-18	True	AATAAA	-19	NA	46923	41219	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_41628_42808_43066_45439_46512_46806
H1_mix_00053512	chr2	-	2472	11	FSM	ENSG00000035115.22	ENST00000473104.5	2463	11	0	-9	0	0	multi-exon	FALSE	canonical	1	2	junction_10	106.63024899155	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCAATTTTGTTTTTCT	2014	False	NA	-6	True	AATAAA	-25	NA	262786	218143	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219002_229965_230045_231022_231192_233100_233230_234159_234273_243502_243563_247537_247603_249730_249845_253004_253116_260084_260703_262630
H1_mix_00053513	chr2	-	3106	9	NIC	ENSG00000035115.22	novel	1999	10	NA	NA	60	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_8	74.2647291787966	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAATATTTCAATTTTGTT	117	False	NA	-11	True	AATAAA	-20	NA	264683	218148	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_219002_229965_230045_231022_231192_233100_233230_234159_234273_247537_247603_249730_249845_253004_253116_263210
H1_mix_00053514	chr2	-	2224	11	NIC	ENSG00000035115.22	novel	1279	11	NA	NA	17	-7	combination_of_known_junctions	FALSE	canonical	3	35	junction_7	86.7537319082009	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTTACTAAGTTAATATT	249	False	NA	-22	True	AATAAA	-9	NA	264551	218159	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_219002_229965_230045_231022_231192_233100_233230_234159_234273_242797_242872_243502_243563_247537_247603_249730_249845_253004_253116_264083
H1_mix_00053519	chr2	-	1653	7	NNC	ENSG00000189292.16	novel	809	5	NA	NA	-169	281	intron_retention	FALSE	canonical	3	8	junction_6	16.8498269031663	1754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCATGAAAATGCTTAACT	NA	False	NA	NA	False	NA	NA	NA	289020	279276	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_280150_283110_283176_286122_286204_286289_286344_287582_287893_288552_288790_288987
H1_mix_00053520	chr2	-	1647	6	NIC	ENSG00000189292.16	novel	1184	6	NA	NA	-165	78	intron_retention	FALSE	canonical	3	14	junction_5	14.7322774885623	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACACTGGCAAAAGGTCA	NA	False	NA	72	True	NA	NA	NA	289016	279479	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_280153_283110_283176_286122_286204_286289_286344_287582_287893_288552
H1_mix_00053521	chr2	-	526	5	FSM	ENSG00000189292.16	ENST00000401489.6	526	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	10.3047319227625	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACACAAAAGGA	1080	False	NA	NA	False	GATAAA	-36	NA	287687	279928	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_280150_283110_283176_286122_286204_286289_286344_287582
H1_mix_00053522	chr2	-	809	5	FSM	ENSG00000189292.16	ENST00000452023.1	809	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	15.7539677541881	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCTTGGACAGACACAC	NA	False	NA	NA	False	NA	NA	NA	288851	283110	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_283176_286122_286204_286289_286344_287582_287893_288552
H1_mix_00053523	chr2	-	3128	5	FSM	ENSG00000151353.15	ENST00000405941.3	654	5	-81	-2393	2	943	multi-exon	FALSE	canonical	3	17	junction_4	112.629924975559	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGGGCT	667	False	NA	NA	False	AATAAA	-5	NA	676785	667029	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_669676_669756_669851_672807_672863_675509_675631_676573
H1_mix_00053525	chr2	-	832	2	ISM	ENSG00000235688.3	ENST00000456949.3	869	3	50	148	-12	-134	intron_retention	FALSE	canonical	2	13	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCGGAGGCCACGATGCCCG	1234	False	NA	NA	False	NA	NA	NA	950715	949774	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_949802_949910
H1_mix_00053526	chr2	-	6825	24	NNC	ENSG00000130508.11	novel	6817	23	NA	NA	0	52867	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	106.45857932328	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATGTTTTCCTATGTGAT	73	False	NA	NA	False	NA	NA	NA	1744502	1579019	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_1579046_1631891_1634324_1635407_1635522_1638845_1638979_1639301_1639423_1643367_1643577_1644617_1644753_1648171_1649676_1653627_1653786_1654399_1654509_1660880_1661038_1662071_1662185_1663604_1663764_1664957_1665075_1666213_1666487_1673642_1673813_1676926_1677045_1680192_1680363_1683655_1683728_1684079_1684152_1687631_1687704_1691927_1692000_1693062_1693135_1744255
H1_mix_00053528	chr2	-	281	1	Genic_Genomic	ENSG00000225234.1	novel	NA	NA	NA	NA	1165	278	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACCAGGAAGAAATAAT	2010	False	NA	NA	False	AAAACA	-2	NA	3481244	3480963	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr2_-_3481000_3481200
H1_mix_00053529	chr2	-	436	3	FSM	ENSG00000242282.6	ENST00000416463.1	436	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTATGTCGCAGTGTTCGG	2712	False	NA	-4	True	AATAAA	-20	NA	3534143	3531988	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_3532311_3533107_3533191_3534112
H1_mix_00053530	chr2	-	2763	12	FSM	ENSG00000286905.1	ENST00000658393.1	2742	12	0	-21	0	19	multi-exon	TRUE	canonical	2	6	junction_3	242.206182230644	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTATGTCGCAGTGTTCGG	27	True	NA	-4	True	AATAAA	-20	NA	3558304	3531988	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_3532311_3533107_3534256_3536197_3536314_3536723_3536912_3545700_3545872_3547930_3548056_3548639_3548725_3549057_3549113_3550372_3550473_3552143_3552309_3556788_3556905_3558132
H1_mix_00053531	chr2	-	2815	5	FSM	ENSG00000134326.12	ENST00000256722.10	3095	5	273	7	78	-5	multi-exon	FALSE	canonical	2	5	junction_2	1.29903810567666	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTATGCTGTCATCCTG	1003	False	NA	-14	True	AATAAA	-17	NA	6865634	6848322	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_6849974_6851449_6851684_6861183_6861386_6863463_6863579_6865021
H1_mix_00053532	chr2	-	602	1	FSM	ENSG00000271947.1	ENST00000607613.1	578	1	-103	79	-103	-79	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCATTTTGTTTTACTC	7508	False	NA	NA	False	NA	NA	NA	6906404	6905802	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_6905800_6906400
H1_mix_00053533	chr2	-	1574	2	FSM	ENSG00000228203.7	ENST00000668217.1	1567	2	3	-10	3	3	multi-exon	FALSE	canonical	2	2	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGCACTTCATAAAAATTT	NA	False	NA	NA	False	NA	NA	NA	6914409	6912307	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_6913665_6914192
H1_mix_00053538	chr2	-	214	1	FSM	ENSG00000213772.3	ENST00000487533.1	337	1	-67	190	-67	-190	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCGCTGATGATTACACCAA	NA	False	NA	NA	False	NA	NA	NA	9271695	9271481	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_9271500_9271700
H1_mix_00053542	chr2	-	560	4	FSM	ENSG00000119185.13	ENST00000497031.5	560	4	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_3	153.338405713202	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTCATCTATTTTCTGG	230	False	NA	-10	True	ATTAAA	-34	NA	9423444	9406647	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_9406906_9408112_9408206_9412268_9412406_9423372
H1_mix_00053544	chr2	-	1349	5	NIC	ENSG00000119185.13	novel	1043	6	NA	NA	7	0	intron_retention	FALSE	canonical	3	41	junction_4	149.967496478404	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAACTCTCAATGAAGTCA	26	True	NA	-22	True	ATTAAA	-22	NA	9423473	9406659	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_9407599_9408112_9408206_9412268_9412406_9414177_9414257_9423372
H1_mix_00053545	chr2	-	1031	8	NIC	ENSG00000119185.13	novel	4859	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_7	159.177990479404	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAACTCTCAATGAAGTCA	19	True	NA	-22	True	ATTAAA	-22	NA	9423480	9406659	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9419989_9420101_9423372
H1_mix_00053546	chr2	-	1343	6	NNC	ENSG00000119185.13	novel	4859	8	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	162.597170947099	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTTAACTCTCAATGAAG	-2	True	NA	-25	True	ATTAAA	-19	NA	9423166	9406662	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_9406906_9408112_9408202_9412268_9412406_9414177_9414257_9418625_9418733_9422478
H1_mix_00053547	chr2	-	793	6	NNC	ENSG00000119185.13	novel	4153	7	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	175.365903185311	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTTAACTCTCAATGAAG	22	True	NA	-25	True	ATTAAA	-19	NA	9423477	9406662	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_9406906_9407448_9407585_9408112_9408206_9412268_9412406_9414177_9414257_9423372
H1_mix_00053552	chr2	-	467	3	FSM	ENSG00000151694.14	ENST00000649798.1	467	3	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_2	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCCAGCACAGACTCACAT	NA	False	NA	NA	False	NA	NA	NA	9493153	9490358	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_9490519_9491100_9491152_9492897
H1_mix_00053553	chr2	-	2564	3	FSM	ENSG00000205795.5	ENST00000381813.5	3045	3	156	325	156	-325	multi-exon	FALSE	canonical	1	3	junction_2	1.5	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTGTGTACCAGCCGC	8	False	NA	NA	False	AATAAA	-12	NA	10080255	10056797	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_10058959_10065903_10065957_10079905
H1_mix_00053554	chr2	-	254	1	FSM	ENSG00000206647.1	ENST00000383920.1	135	1	76	-195	76	195	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAATACAAAATTAGCCA	NA	False	NA	NA	False	NA	NA	NA	10155130	10154876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_10154900_10155100
H1_mix_00053555	chr2	-	2335	13	NNC	ENSG00000115758.13	novel	2476	12	NA	NA	-252	30190	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	163.589998166147	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGAGGCTCAGGAAGAGG	NA	False	NA	NA	False	NA	NA	NA	10448579	10409777	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_10409805_10440387_10440869_10441508_10441724_10441816_10441930_10442011_10442175_10443229_10443314_10443489_10443572_10443701_10443837_10444094_10444268_10444473_10444648_10444930_10445050_10445154_10445265_10448120
H1_mix_00053556	chr2	-	2336	13	NNC	ENSG00000115758.13	novel	2476	12	NA	NA	-252	19758	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	163.589998166147	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGGCTGGGGGCTGGG	NA	False	NA	NA	False	NA	NA	NA	10448579	10420209	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_10420231_10440380_10440869_10441508_10441724_10441816_10441930_10442011_10442175_10443229_10443314_10443489_10443572_10443701_10443837_10444094_10444268_10444473_10444648_10444930_10445050_10445154_10445265_10448120
H1_mix_00053558	chr2	-	1126	3	NNC	ENSG00000272275.1	novel	393	3	NA	NA	-2446	84	intron_retention	FALSE	canonical	1	1	junction_2	16	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGATTAAATTAAATGATTA	NA	False	NA	NA	False	AATAAA	-19	NA	10772504	10767790	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_10768794_10769996_10770056_10772440
H1_mix_00053559	chr2	-	461	4	FSM	ENSG00000134318.15	ENST00000493096.1	461	4	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_3	7.76029781788188	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATTTCCAGTGGAGCCA	NA	False	NA	NA	False	AATGAA	-20	NA	11195210	11192675	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_11192713_11193778_11193858_11194255_11194345_11194954
H1_mix_00053560	chr2	-	1795	15	FSM	ENSG00000134318.15	ENST00000261535.7	1795	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	38.3134228090749	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATATCCACTGAGAAAGT	1303	False	NA	NA	False	AAAAAG	-14	NA	11344141	11215359	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_11215413_11215509_11215646_11216157_11216207_11217089_11217170_11218314_11218467_11218965_11219027_11221197_11221358_11222082_11222175_11224321_11224461_11227253_11227399_11235701_11235963_11249660_11249799_11286538_11286640_11287654_11287737_11343995
H1_mix_00053561	chr2	-	3304	8	FSM	ENSG00000169016.17	ENST00000444832.5	3296	8	-10	2	-5	-2	multi-exon	FALSE	canonical	0	0	junction_3	80.2869852466762	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTCTGGCGTTGGGTCT	NA	False	NA	-2	True	TATAAA	-23	NA	11466166	11444376	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_11446524_11447626_11447775_11450011_11450127_11451650_11451807_11453581_11453799_11457178_11457234_11458280_11458352_11465771
H1_mix_00053564	chr2	-	391	3	FSM	ENSG00000197872.11	ENST00000469507.1	557	3	0	166	0	-166	multi-exon	FALSE	canonical	3	46	junction_1	5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGCATAGCTGAAGAAGC	6743	False	NA	NA	False	NA	NA	NA	16561482	16560822	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_16561070_16561160_16561278_16561455
H1_mix_00053566	chr2	-	2419	12	FSM	ENSG00000163029.16	ENST00000381272.5	1803	12	-616	0	-616	0	multi-exon	FALSE	canonical	3	243	junction_1	32.6435798555416	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAATTAAGTAAGTTGCAA	6785	False	NA	-7	True	NA	NA	NA	17747028	17716749	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_17716906_17717087_17717177_17718076_17718224_17720939_17721039_17721141_17721262_17725256_17725359_17726388_17726470_17731077_17731140_17731740_17731878_17738220_17738327_17741611_17741730_17745826
H1_mix_00053567	chr2	-	1417	9	NNC	ENSG00000068697.7	novel	1365	7	NA	NA	0	137491	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1821.72122850205	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCAGTTGCTGATTGTAG	-4	True	NA	NA	False	AAAAAG	-17	NA	20051628	19895158	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_19895192_19952781_19952803_20032651_20033280_20034316_20034416_20034966_20035063_20037315_20037439_20037537_20037615_20040890_20041012_20051409
H1_mix_00053568	chr2	-	832	2	FSM	ENSG00000183891.6	ENST00000431392.1	779	2	-53	0	-53	0	multi-exon	FALSE	canonical	2	10	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAATTTTTTTTCTTTT	-12	True	NA	NA	False	NA	NA	NA	19901694	19897868	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_19898036_19901029
H1_mix_00053571	chr2	-	591	4	FSM	ENSG00000115884.11	ENST00000447124.1	591	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	103.721850264167	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGGCCCAAGGAGGGAGA	-2	True	NA	NA	False	NA	NA	NA	20225094	20204151	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_20204292_20205342_20205425_20223202_20223279_20224801
H1_mix_00053573	chr2	-	6086	20	NNC	ENSG00000055917.16	novel	6309	21	NA	NA	2	-17	at_least_one_novel_splicesite	TRUE	canonical	3	15	junction_9	126.348877245362	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCCTCTGTACCTCAGTT	-8	True	NA	19	True	AATAAA	-30	NA	20350832	20248707	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_20251717_20253821_20254015_20254862_20254985_20255215_20255342_20256032_20256171_20258242_20258372_20260336_20260467_20263192_20263461_20282946_20283229_20283342_20283487_20290651_20290791_20294375_20294519_20297552_20297679_20307977_20308072_20308313_20308585_20311493_20311664_20312235_20312424_20318536_20318646_20327309_20327379_20350596
H1_mix_00053574	chr2	-	5181	21	NNC	ENSG00000055917.16	novel	6309	21	NA	NA	-54	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_20	119.721959138664	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTATGAAAATATTTTGG	1899	False	NA	-13	True	ATTAAA	-17	NA	20350355	20249863	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_20251717_20253821_20254015_20254862_20254985_20255215_20255342_20256032_20256171_20258242_20258372_20260336_20260467_20263192_20263461_20278582_20278820_20282946_20283232_20283342_20283487_20290651_20290791_20294375_20294519_20297552_20297679_20307977_20308072_20308313_20308585_20311493_20311664_20312235_20312424_20318536_20318646_20327309_20327379_20350108
H1_mix_00053575	chr2	-	4965	21	NNC	ENSG00000055917.16	novel	6309	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_20	118.448891932344	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTATGAAAATATTTTGG	-10	True	NA	-13	True	ATTAAA	-17	NA	20350834	20249863	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_20251717_20253821_20254015_20254862_20254985_20255215_20255342_20256032_20256171_20258236_20258372_20260336_20260467_20263192_20263461_20278582_20278820_20282946_20283232_20283342_20283487_20290651_20290791_20294375_20294519_20297552_20297679_20307977_20308072_20308313_20308585_20311493_20311664_20312235_20312424_20318536_20318646_20327309_20327379_20350809
H1_mix_00053579	chr2	-	1375	3	FSM	ENSG00000118960.13	ENST00000406618.3	1375	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	3	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAGAGAAGCAAAACTGG	1	True	NA	NA	False	AATAAA	-25	NA	20651084	20640024	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_20641181_20645339_20645506_20651031
H1_mix_00053580	chr2	-	4850	8	NNC	ENSG00000118961.15	novel	3917	7	NA	NA	13	1596	intron_retention	FALSE	canonical	1	1	junction_1	54.6428104574964	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCCACCACTTCATCCCC	12	True	NA	NA	False	AATGAA	-33	NA	20823076	20682417	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_20682589_20683243_20687095_20701569_20701653_20739970_20740206_20774809_20774980_20790254_20790399_20801309_20801466_20823036
H1_mix_00053581	chr2	-	3120	7	NIC	ENSG00000118961.15	novel	2045	9	NA	NA	18	0	intron_retention	FALSE	canonical	3	10	junction_1	67.7093461462711	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCTATCTCCTGCATCC	17	True	NA	-16	True	TTTAAA	-7	NA	20823071	20684030	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_20684924_20685546_20687095_20701569_20701653_20739970_20740206_20774809_20774980_20801309_20801466_20823036
H1_mix_00053582	chr2	-	418	2	NNC	ENSG00000228999.4	novel	1182	2	NA	NA	-72780	18	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	0	53	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACTGCGTGCTTCGTGCA	NA	False	NA	-24	True	AATAAA	-14	NA	22038460	21933217	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_21933548_22038372
H1_mix_00053584	chr2	-	8359	28	NIC	ENSG00000119778.15	novel	8112	28	NA	NA	-74	188	combination_of_known_junctions	FALSE	canonical	3	19	junction_7	13.6578813477089	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGTGGTTTTAGTTTTAG	7	True	NA	NA	False	NA	NA	NA	23927197	23748475	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_23752088_23754178_23754308_23754646_23754775_23757417_23758102_23762208_23762347_23765505_23765629_23782868_23783029_23786041_23786224_23788511_23788648_23798137_23798324_23810315_23810503_23819746_23819883_23823257_23823570_23828848_23828940_23833918_23834079_23857414_23857504_23863380_23863556_23864808_23864925_23867834_23867947_23869662_23869762_23875828_23875905_23880638_23880756_23884764_23884874_23885726_23885830_23887831_23887986_23888349_23888400_23895818_23895971_23926554
H1_mix_00053585	chr2	-	3805	3	FSM	ENSG00000163026.12	ENST00000406895.3	3700	3	-47	-58	-17	58	multi-exon	FALSE	canonical	2	4	junction_1	83	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCGGCAATAATCTTGCA	NA	False	NA	43	True	NA	NA	NA	24047408	24029288	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_24031163_24037676_24039513_24047313
H1_mix_00053589	chr2	-	2625	3	NIC	ENSG00000138031.15	novel	5050	21	NA	NA	122	0	intron_retention	FALSE	canonical	3	105	junction_1	16	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTGTGGAAATTCTGTT	NA	False	NA	-4	True	ATTAAA	-20	NA	24823241	24819168	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_24821641_24822510_24822631_24823208
H1_mix_00053591	chr2	-	4182	21	FSM	ENSG00000138031.15	ENST00000405392.6	4182	21	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	29.4057817444121	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTTATTCAACTTGAAAG	1238	False	NA	-23	True	ATTAAA	-1	NA	24918987	24819187	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_24820115_24820723_24820849_24821516_24821641_24822510_24822631_24823208_24823356_24824377_24824537_24826044_24826130_24827545_24827609_24827901_24828162_24830708_24830826_24831661_24831750_24834484_24834647_24834793_24834937_24836916_24837046_24838444_24838623_24839872_24840032_24841258_24841387_24841555_24841668_24842253_24842385_24872569_24872720_24918312
H1_mix_00053593	chr2	-	561	5	FSM	ENSG00000115137.12	ENST00000468467.5	561	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	5.30919014539883	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCAACAAGGTAACCCCTC	6	True	NA	NA	False	NA	NA	NA	24971613	24957819	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_24957975_24958546_24958602_24963404_24963475_24967210_24967294_24971415
H1_mix_00053594	chr2	-	1086	4	NNC	ENSG00000115138.11	novel	883	4	NA	NA	0	80569	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	94.8132667697699	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGGGGAGGGACTCCAG	378	False	NA	NA	False	NA	NA	NA	25168571	25080283	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_25080312_25160920_25161753_25164640_25164793_25168497
H1_mix_00053595	chr2	-	9478	23	FSM	ENSG00000119772.19	ENST00000264709.7	9501	23	0	23	0	-4	multi-exon	FALSE	canonical	3	15	junction_22	193.372462080073	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGGAAAAGCACCGTAA	NA	False	NA	37	True	AATAAA	-24	NA	25342590	25227877	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_25234421_25235706_25235826_25236935_25237006_25239129_25239216_25240301_25240451_25240639_25240731_25241561_25241708_25243897_25243983_25244154_25244339_25244539_25244653_25245252_25245333_25246019_25246065_25246159_25246310_25246619_25246777_25247050_25247159_25247590_25247750_25248036_25248253_25274940_25275088_25275499_25275544_25282440_25282712_25300138_25300244_25313912_25314162_25342429
H1_mix_00053596	chr2	-	4478	24	FSM	ENSG00000119772.19	ENST00000380756.7	4477	24	0	-1	0	0	multi-exon	FALSE	canonical	3	10	junction_5	209.834816661949	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGCTTTCCTGTCTAAG	-2	True	NA	-22	True	AATAAA	-18	NA	25342489	25232975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_25234421_25235706_25235826_25236935_25237006_25239129_25239216_25239314_25239514_25240301_25240451_25240639_25240731_25241561_25241708_25243897_25243983_25244154_25244339_25244539_25244653_25245252_25245333_25246019_25246065_25246159_25246310_25246619_25246777_25247050_25247159_25247590_25247750_25248036_25248253_25274940_25275088_25275499_25275544_25282440_25282712_25300138_25300244_25313912_25314162_25342429
H1_mix_00053599	chr2	-	1774	4	FSM	ENSG00000119772.19	ENST00000406659.3	1775	4	0	1	0	-1	multi-exon	FALSE	canonical	3	15	junction_3	20.0720922897661	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAGAAGCTTTTATTCAT	NA	False	NA	-3	True	AATACA	-14	NA	25342590	25281452	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_25282712_25300138_25300244_25313912_25314162_25342429
H1_mix_00053601	chr2	-	1797	9	NNC	ENSG00000138101.20	novel	1002	6	NA	NA	0	18925	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	116.232996068242	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAACAAAGGCCCTGGACA	8	True	NA	NA	False	NA	NA	NA	25673488	25557590	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_25558408_25576837_25577005_25580720_25580827_25596085_25596241_25607235_25607322_25628170_25628385_25639013_25639095_25652593_25652662_25673385
H1_mix_00053602	chr2	-	2242	9	NNC	ENSG00000138101.20	novel	1002	6	NA	NA	1	1190	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	122.331963832026	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGTTTCTTTTTGCTTTC	18	True	NA	1	True	AATAAA	-20	NA	25673549	25575325	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_25576527_25576837_25577005_25580720_25580827_25596085_25596241_25607235_25607322_25628170_25628385_25639013_25639095_25652593_25652662_25673385
H1_mix_00053606	chr2	-	489	1	FSM	ENSG00000218682.1	ENST00000403125.1	506	1	95	-78	95	78	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	59	False	NA	NA	False	AATAAA	-13	NA	25856871	25856382	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_25856400_25856900
H1_mix_00053607	chr2	-	5319	8	NIC	ENSG00000084731.15	novel	5452	9	NA	NA	16	0	intron_retention	FALSE	canonical	3	34	junction_3	60.9469491627341	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGAGTTGACTGCCTTACTT	10	True	NA	-16	True	AATAAA	-17	NA	25982481	25926601	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_25929072_25929304_25929478_25929954_25930061_25951788_25951906_25954266_25954386_25955540_25955664_25956342_25956445_25980372
H1_mix_00053608	chr2	-	2993	19	FSM	ENSG00000084754.12	ENST00000492433.2	2982	19	0	-11	0	-9	multi-exon	FALSE	canonical	3	829	junction_10	88.1952099704309	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGGATTTCCTCATTG	17	True	NA	-29	True	ATTAAA	-11	NA	26244604	26190643	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_26191629_26192309_26192425_26193576_26193773_26194569_26194639_26195091_26195233_26197690_26197778_26201148_26201321_26204061_26204197_26209779_26209890_26212569_26212627_26214442_26214562_26215052_26215176_26230191_26230295_26232159_26232280_26234216_26234356_26236854_26236989_26238933_26239005_26239101_26239144_26244529
H1_mix_00053610	chr2	-	1521	6	FSM	ENSG00000138028.17	ENST00000402550.5	1575	6	56	-2	-29	2	multi-exon	FALSE	canonical	2	6	junction_1	7.72010362624751	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAGAATACAGCCTTGTAA	13	True	NA	NA	False	NA	NA	NA	27119059	27098886	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27099841_27102096_27102222_27102359_27102431_27102525_27102592_27104286_27104378_27118845
H1_mix_00053612	chr2	-	3094	18	NIC	ENSG00000138074.15	novel	2230	18	NA	NA	-18	0	intron_retention	FALSE	canonical	3	24	junction_16	280.543367975219	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGCTCCTGTACTGTCT	-19	True	NA	-1	True	AATAAA	-21	NA	27211956	27199586	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_27200580_27200997_27201114_27201349_27201454_27201665_27201848_27201987_27202075_27202812_27202881_27203232_27203346_27203778_27203868_27204460_27204591_27204790_27204932_27205349_27205505_27206025_27206094_27206482_27206535_27206876_27206943_27207257_27207791_27208613_27208687_27211466_27211534_27211899
H1_mix_00053613	chr2	-	3077	17	NNC	ENSG00000138074.15	novel	3213	17	NA	NA	11	0	intron_retention	FALSE	canonical	3	10	junction_8	301.359808824933	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGCTCCTGTACTGTCT	646	False	NA	-1	True	AATAAA	-21	NA	27212135	27199586	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_27200580_27200997_27201114_27201349_27201454_27201665_27201848_27201987_27202075_27202812_27202881_27203232_27203346_27203778_27203927_27204460_27204591_27204790_27204932_27205411_27205505_27206025_27206094_27206482_27206535_27206876_27206943_27207257_27207791_27211466_27211534_27212019
H1_mix_00053616	chr2	-	1012	9	NNC	ENSG00000115204.15	novel	1002	8	NA	NA	0	87738	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	155.170823207844	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGGAAATTTTAAACATTG	12	True	NA	NA	False	AATGAA	-31	NA	27323081	27221753	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_27221780_27309491_27309982_27311898_27311952_27312213_27312247_27312493_27312590_27312679_27312773_27312993_27313110_27322447_27322523_27323051
H1_mix_00053617	chr2	-	2923	4	FSM	ENSG00000115194.11	ENST00000497341.5	3448	4	525	0	-238	0	multi-exon	FALSE	canonical	3	71	junction_1	16.8588914885357	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAATCAAA	6997	False	NA	NA	False	NA	NA	NA	27258058	27253683	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27255461_27256385_27256521_27256787_27256894_27257153
H1_mix_00053622	chr2	-	3713	20	NNC	ENSG00000115207.14	novel	3882	19	NA	NA	3	14884	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	110.366049217794	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACCAGCCTGGCCAATAT	4	True	NA	NA	False	NA	NA	NA	27356764	27310964	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_27311071_27325853_27326894_27327176_27327285_27328036_27328190_27328467_27328597_27328843_27328932_27329120_27329283_27329378_27329524_27333654_27333785_27333973_27334000_27335597_27335707_27335916_27336029_27336197_27336426_27337243_27337343_27337480_27337559_27337925_27338021_27341947_27342234_27342825_27343148_27343307_27343579_27356738
H1_mix_00053630	chr2	-	2906	18	NIC	ENSG00000115207.14	novel	3992	19	NA	NA	-5319	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	102.789838335567	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCTTTTACACGTCATG	NA	False	NA	-12	True	ATTAAA	-19	NA	27343578	27325853	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_27326219_27327176_27327285_27328036_27328190_27328467_27328597_27328843_27328932_27329120_27329283_27329378_27329524_27333654_27333785_27333973_27334000_27335597_27335707_27335916_27336029_27336197_27336426_27337243_27337343_27337480_27337559_27337925_27338021_27341947_27342234_27342825_27343148_27343307
H1_mix_00053635	chr2	-	2252	11	NNC	ENSG00000115241.11	novel	2210	10	NA	NA	0	34864	intron_retention	FALSE	non_canonical	0	0	junction_1	302.396908052976	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATCAGAATGGGCACGGT	-20	True	NA	NA	False	NA	NA	NA	27409591	27346330	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_27346368_27381193_27381806_27382125_27382229_27382475_27382606_27383365_27383601_27383951_27384093_27384672_27385089_27385746_27385880_27386193_27386280_27387088_27387159_27409302
H1_mix_00053636	chr2	-	2346	11	NNC	ENSG00000115241.11	novel	2210	10	NA	NA	-93	34864	intron_retention	FALSE	non_canonical	0	0	junction_1	302.396908052976	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATCAGAATGGGCACGGT	NA	False	NA	NA	False	NA	NA	NA	27409684	27346330	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_27346369_27381193_27381806_27382125_27382229_27382475_27382606_27383365_27383601_27383951_27384093_27384672_27385089_27385746_27385880_27386193_27386280_27387088_27387159_27409302
H1_mix_00053637	chr2	-	1784	13	NIC	ENSG00000115211.17	novel	1644	13	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_12	194.045294683713	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTGCCTTTGTTTCTC	143	False	NA	-1	True	AATAAA	-25	NA	27370300	27364351	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_27364600_27364717_27364899_27366758_27366937_27367073_27367202_27367456_27367560_27367745_27367823_27368024_27368140_27368371_27368464_27368653_27368734_27369005_27369213_27369413_27369550_27369875_27369920_27370105
H1_mix_00053638	chr2	-	1713	13	NNC	ENSG00000115211.17	novel	1644	13	NA	NA	-76	0	at_least_one_novel_splicesite	FALSE	canonical	1	22	junction_11	202.779625181843	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTGCCTTTGTTTCTC	29	False	NA	-1	True	AATAAA	-25	NA	27370414	27364351	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_27364600_27364717_27364899_27366758_27366937_27367073_27367202_27367456_27367560_27367745_27367823_27368024_27368140_27368371_27368464_27368653_27368734_27369005_27369210_27369413_27369546_27369875_27369920_27370283
H1_mix_00053642	chr2	-	510	3	FSM	ENSG00000163795.14	ENST00000436006.1	510	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	94.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGCCGCTGCCCCTAC	5484	False	NA	NA	False	NA	NA	NA	27380790	27378730	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27379055_27380092_27380249_27380760
H1_mix_00053647	chr2	-	2850	2	FSM	ENSG00000205334.3	ENST00000379677.2	2860	2	6	4	6	-4	multi-exon	FALSE	canonical	2	2	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACCTCATTCTGCCCATT	11	True	NA	NA	False	AATAAA	-14	NA	27715726	27705789	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27708497_27715583
H1_mix_00053648	chr2	-	2380	14	NIC	ENSG00000158089.15	novel	2447	15	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	17.0106127680799	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATCTCTTGCTCTTTTCT	16	True	NA	-3	True	AATAAA	-24	NA	31138440	30910468	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_30911060_30912222_30912343_30924118_30924298_30924739_30924824_30929394_30929488_30932067_30932195_30942200_30942305_30944857_30944943_30945782_30945871_30955617_30955740_30955911_30955978_30958396_30958465_30992837_30993008_31137957
H1_mix_00053649	chr2	-	1779	8	NIC	ENSG00000162959.14	novel	1516	10	NA	NA	-114	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_2	80.85689045897	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTGATTTAAACTTATT	341	False	NA	NA	False	AATAAA	-19	NA	32010671	31867822	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_31868493_31869847_31869953_31891991_31892135_31917925_31918038_31920797_31920911_31932066_31932136_31943301_31943384_32010186
H1_mix_00053650	chr2	-	1516	10	FSM	ENSG00000162959.14	ENST00000404530.6	1516	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_9	75.3384134635836	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTGATTTAAACTTATT	4	True	NA	NA	False	AATAAA	-19	NA	32011008	31867822	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_31868493_31869847_31869953_31883385_31883463_31891991_31892135_31917925_31918038_31920797_31920911_31932066_31932136_31943301_31943384_32010186_32010265_32010941
H1_mix_00053652	chr2	-	2988	1	Genic_Genomic	ENSG00000162959.14	novel	NA	NA	NA	NA	17884	1004	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTACCCTTGAACTTAAAG	7816	False	NA	NA	False	NA	NA	NA	31925499	31922511	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr2_-_31922500_31925500
H1_mix_00053653	chr2	-	705	6	NNC	ENSG00000162961.14	novel	688	5	NA	NA	0	21326	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	693.030273509029	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGCTTGAGCCTGGTAG	26	False	NA	NA	False	AAAAAG	-12	NA	32039780	31990559	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_31990591_32023893_32024257_32029593_32029737_32039278_32039327_32039420_32039493_32039732
H1_mix_00053654	chr2	-	695	6	NNC	ENSG00000162961.14	novel	688	5	NA	NA	0	21326	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	693.030273509029	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGCTTGAGCCTGGTAG	26	False	NA	NA	False	AAAAAG	-12	NA	32039780	31990559	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_31990591_32023903_32024257_32029593_32029737_32039278_32039327_32039420_32039493_32039732
H1_mix_00053655	chr2	-	637	7	FSM	ENSG00000162961.14	ENST00000452582.5	637	7	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	832.50498830671	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGGGTCTCCTATGTTC	52	False	NA	-10	True	AATAAA	-11	NA	32039754	32011885	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_32012053_32023421_32023475_32023676_32023809_32029593_32029737_32039278_32039327_32039420_32039493_32039732
H1_mix_00053657	chr2	-	1174	4	ISM	ENSG00000162961.14	ENST00000342166.10	688	5	51	-297	0	297	intron_retention	FALSE	canonical	3	1732	junction_1	60.2236572194755	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTATCAACATTTATAGTA	52	False	NA	-7	True	AATAAA	-32	NA	32039754	32023607	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_32024257_32029593_32029737_32039278_32039327_32039420
H1_mix_00053658	chr2	-	2818	7	FSM	ENSG00000119812.20	ENST00000403368.1	2818	7	0	0	0	0	multi-exon	FALSE	canonical	3	611	junction_2	79.6673640136843	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAAGTTCTCTCTTTGGTTT	-1	True	NA	-27	True	AATAAA	-8	NA	33599291	33583669	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_33585698_33586561_33586679_33587239_33587321_33588334_33588520_33592079_33592215_33595488_33595638_33599168
H1_mix_00053659	chr2	-	887	1	FSM	ENSG00000260025.1	ENST00000565283.1	366	1	-471	-50	-471	50	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACGGTGTGGAGATGGTT	-34	True	NA	47	True	GATAAA	-33	NA	36355585	36354698	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_36354700_36355600
H1_mix_00053663	chr2	-	6349	19	NNC	ENSG00000115825.11	novel	6156	19	NA	NA	0	1244	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	90.9453268130683	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTCAAAGTCACTTCCAAA	25	False	37324833	NA	False	AAGAAA	-25	NA	37324808	37249257	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_37249550_37249632_37253351_37254203_37254290_37256661_37256930_37259582_37259682_37260222_37260385_37267429_37267537_37269614_37269688_37272379_37272433_37274420_37274698_37275766_37275845_37277865_37277990_37279745_37279930_37282541_37282620_37286176_37286370_37289355_37289514_37290867_37291000_37293132_37293272_37324680
H1_mix_00053664	chr2	-	6111	19	FSM	ENSG00000115825.11	ENST00000379066.5	6111	19	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_18	67.1076158030177	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGTTGATTATCTGGAG	6939	False	NA	16	True	AATAAA	-31	NA	37317894	37250501	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_37253351_37254203_37254290_37256661_37256930_37259582_37259682_37260222_37260385_37267429_37267537_37269614_37269688_37272379_37272433_37274420_37274698_37275766_37275845_37277865_37277990_37279745_37279930_37282541_37282620_37286176_37286370_37289355_37289514_37290867_37291000_37293132_37293272_37316236_37317180_37317786
H1_mix_00053667	chr2	-	2883	14	NNC	ENSG00000119787.14	novel	3805	13	NA	NA	0	36537	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	127.910656689248	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAAATATTTTAGAATTAA	808	False	NA	NA	False	NA	NA	NA	38377256	38257416	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_38257443_38294884_38296114_38298143_38298576_38299255_38299328_38300271_38300329_38309378_38309507_38310308_38310448_38313150_38313244_38314607_38314665_38315283_38315335_38318534_38318640_38318884_38319020_38343267_38343513_38377142
H1_mix_00053669	chr2	-	2335	13	FSM	ENSG00000119787.14	ENST00000419554.6	2335	13	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	125.93657464507	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAGAAGTAGTTTAGTGT	5	True	NA	-5	True	AATAAA	-24	NA	38377273	38295900	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_38296591_38298143_38298576_38299255_38299328_38300271_38300329_38309378_38309507_38310308_38310448_38313150_38313244_38314607_38314665_38315283_38315335_38318534_38318640_38318884_38319020_38343267_38343513_38377142
H1_mix_00053670	chr2	-	526	5	FSM	ENSG00000119787.14	ENST00000449130.5	526	5	0	0	0	0	multi-exon	FALSE	canonical	2	28	junction_4	153.578155998827	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGTGAGCTCTTAAACAG	803	False	NA	68	True	NA	NA	NA	38377261	38309378	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_38309507_38310308_38310448_38313150_38313244_38314607_38314655_38377142
H1_mix_00053672	chr2	-	2190	13	FSM	ENSG00000143889.16	ENST00000272249.7	2190	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_10	259.146823999232	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAATGTGTTCATTTTCAT	NA	False	NA	-18	True	TATAAA	-14	NA	38591641	38563507	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_38564238_38568198_38568298_38568385_38568444_38569132_38569335_38569803_38569926_38573209_38573428_38577460_38577533_38577919_38578003_38581912_38581986_38582071_38582169_38583840_38583927_38585643_38585882_38591529
H1_mix_00053673	chr2	-	2121	14	NIC	ENSG00000143889.16	novel	3980	14	NA	NA	-27	1	intron_retention	FALSE	non_canonical	0	0	junction_10	249.460815008795	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTGTAAGCTTAAATATT	412	False	NA	-17	True	AATAAA	-22	NA	38602884	38564030	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_38564238_38568198_38568298_38568385_38568444_38569132_38569335_38569803_38569926_38573209_38573428_38577460_38577533_38577919_38578003_38581912_38581986_38582071_38582169_38583840_38583927_38585643_38585882_38591529_38591649_38602437
H1_mix_00053675	chr2	-	1847	7	FSM	ENSG00000115875.19	ENST00000431066.5	1847	7	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_3	734.18724904936	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTTGATTTGTGTTCAA	77	False	NA	27	True	AATAAA	-14	NA	38751282	38744894	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_38745188_38746143_38746180_38746693_38746748_38748055_38748158_38748578_38749706_38750013_38750195_38751228
H1_mix_00053677	chr2	-	1223	1	FSM	ENSG00000223922.1	ENST00000439895.1	1223	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGTACAATGGGGAGCTA	NA	False	NA	NA	False	AATAGA	-2	NA	38811654	38810431	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_38810400_38811700
H1_mix_00053678	chr2	-	654	1	FSM	ENSG00000269210.2	ENST00000601251.2	1056	1	340	62	340	-62	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTCTATGTAAATTTGAAA	375	False	NA	-59	True	NA	NA	NA	38960002	38959348	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_38959300_38960000
H1_mix_00053679	chr2	-	389	4	ISM	ENSG00000115904.15	ENST00000472480.2	4370	5	582	4183	582	-975	5prime_fragment	FALSE	canonical	3	45	junction_2	7.03957069398096	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGATCAAGAAGACAAGG	9943	False	NA	NA	False	AAAAAG	-1	NA	39051305	39024120	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_39024138_39035211_39035311_39035389_39035501_39051143
H1_mix_00053680	chr2	-	201	4	FSM	ENSG00000011566.15	ENST00000465701.1	201	4	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_2	11.6141675934562	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCTGAAAGCAAAAATTCCA	NA	False	NA	NA	False	AATGAA	-37	NA	39299845	39290329	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_39290335_39292772_39292827_39293229_39293269_39299742
H1_mix_00053685	chr2	-	1099	4	NNC	ENSG00000115944.15	novel	3056	4	NA	NA	0	27061	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	825.108208391818	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTTAGCACAAGGTCATC	8	True	NA	NA	False	NA	NA	NA	42361172	42306484	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_42306511_42350501_42351360_42353211_42353344_42361089
H1_mix_00053686	chr2	-	1098	4	NNC	ENSG00000115944.15	novel	3056	4	NA	NA	0	27061	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	825.108208391818	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTTAGCACAAGGTCATC	8	True	NA	NA	False	NA	NA	NA	42361172	42306484	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_42306511_42350502_42351360_42353211_42353344_42361089
H1_mix_00053687	chr2	-	2088	1	FSM	ENSG00000232526.1	ENST00000447826.1	859	1	-131	-1098	-131	1098	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCCTTCAAGTGCTGTAA	NA	False	NA	NA	False	NA	NA	NA	42464128	42462040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_42462000_42464100
H1_mix_00053688	chr2	-	760	4	FSM	ENSG00000162882.15	ENST00000406007.6	760	4	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_2	7.34846922834953	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGGGGTCTGCCGCAG	3039	False	NA	-2	True	AATAAA	-19	NA	42769893	42767088	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_42767516_42767594_42767678_42767859_42767929_42769712
H1_mix_00053689	chr2	-	6018	38	NNC	ENSG00000115970.19	novel	6091	38	NA	NA	-47	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_29	16.8972315884666	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGCCTCCCCTACTTCT	NA	False	NA	-15	True	CATAAA	-19	NA	43596085	43230850	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_43231344_43232712_43232883_43279764_43279897_43286907_43287062_43291695_43291769_43292103_43292223_43292833_43293214_43320445_43320541_43344121_43344238_43397970_43398140_43428099_43428232_43430212_43430303_43485233_43485326_43498832_43498956_43505621_43505736_43508647_43508781_43527878_43527989_43541158_43541317_43549209_43549369_43551788_43551926_43552203_43552340_43556344_43556556_43560233_43560386_43566697_43566822_43570387_43570511_43571706_43571863_43572813_43572993_43574335_43575028_43577021_43577123_43578512_43578608_43581740_43581929_43586400_43586450_43586701_43586735_43586853_43587003_43590823_43590955_43591951_43592047_43592316_43592417_43595930
H1_mix_00053699	chr2	-	5167	39	FSM	ENSG00000138095.20	ENST00000684306.1	5148	39	0	-19	0	0	multi-exon	FALSE	canonical	0	0	junction_9	321.769235844159	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCTCATGCCTGTTAAT	-7	True	NA	-9	True	AATAAA	-15	NA	43995980	43887746	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_43888657_43889733_43889877_43894544_43894630_43896633_43896709_43899218_43899335_43899465_43899606_43901319_43901525_43905691_43905781_43912431_43912559_43918024_43918134_43918255_43918399_43925066_43925158_43925892_43925962_43934189_43934297_43934753_43934879_43943686_43943895_43945331_43945418_43946112_43946244_43947256_43947371_43947730_43947776_43948121_43948200_43948411_43948519_43949601_43949660_43950572_43950601_43957384_43957452_43960540_43960635_43963587_43963707_43973606_43973715_43973794_43973901_43974149_43974296_43974613_43974759_43975090_43975218_43976142_43976230_43976993_43977053_43977154_43977277_43979825_43979949_43982237_43982435_43994980_43995077_43995798
H1_mix_00053700	chr2	-	5093	38	FSM	ENSG00000138095.20	ENST00000683213.1	5071	38	0	-22	0	0	multi-exon	FALSE	canonical	0	0	junction_9	279.422507881673	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCTCATGCCTGTTAAT	5	True	NA	-9	True	AATAAA	-15	NA	43995999	43887746	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_43888657_43889733_43889877_43894544_43894630_43896633_43896709_43899218_43899335_43899465_43899606_43901319_43901525_43905691_43905781_43912431_43912559_43918024_43918134_43918255_43918399_43925066_43925158_43925892_43925962_43934189_43934297_43934753_43934879_43943686_43943895_43945331_43945418_43946112_43946244_43947256_43947371_43947730_43947776_43948121_43948200_43948411_43948519_43949601_43949660_43950572_43950601_43957384_43957452_43960540_43960635_43963587_43963707_43973606_43973715_43973794_43973901_43974149_43974296_43974610_43974759_43975090_43975218_43976142_43976230_43976993_43977053_43977154_43977277_43979825_43979949_43982237_43982435_43995798
H1_mix_00053701	chr2	-	3320	2	FSM	ENSG00000138095.20	ENST00000682353.1	3437	2	117	0	117	0	multi-exon	FALSE	canonical	3	1210	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCCTGAAAAGATGTGAT	NA	False	NA	-95	True	NA	NA	NA	43892229	43887832	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_43888657_43889733
H1_mix_00053712	chr2	-	303	1	FSM	ENSG00000273106.1	ENST00000609837.1	1235	1	925	7	925	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	227	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGACATGGACTTGTTCAT	1084	False	NA	-4	True	ATTAAA	-17	NA	44167934	44167631	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_44167600_44167900
H1_mix_00053713	chr2	-	2698	14	FSM	ENSG00000138078.16	ENST00000260648.10	3672	14	925	49	0	46	multi-exon	FALSE	canonical	3	85	junction_13	40.6817639386466	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCTGATTGATGCTATCT	2038	False	NA	-78	True	NA	NA	NA	44359749	44320875	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44359496
H1_mix_00053717	chr2	-	1599	5	FSM	ENSG00000250565.7	ENST00000522587.6	1599	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	15.4171171105366	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAATTCCAATTCATCCA	10	True	NA	-15	True	AATAAA	-21	NA	46542577	46511846	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_46512813_46535812_46535928_46536610_46536704_46541389_46541454_46542216
H1_mix_00053718	chr2	-	706	4	FSM	ENSG00000151665.13	ENST00000420164.5	586	4	-109	-11	-109	11	multi-exon	FALSE	canonical	3	48	junction_2	133.319999333267	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTGCTTACTGCTTCTT	4773	False	NA	NA	False	AATAAA	-26	NA	46612383	46581273	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_46581592_46591802_46591926_46592474_46592584_46612227
H1_mix_00053719	chr2	-	669	5	NIC	ENSG00000151665.13	novel	1061	7	NA	NA	17	0	combination_of_known_splicesites	FALSE	canonical	3	59	junction_4	135.916104638119	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCTTCAGATGCTGCT	-5	True	NA	NA	False	AATAAA	-15	NA	46617013	46581284	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_46581592_46592474_46592584_46612227_46612345_46613693_46613786_46616969
H1_mix_00053720	chr2	-	3454	2	FSM	ENSG00000151665.13	ENST00000495933.1	3454	2	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTTTAATTTTATATT	15	True	NA	NA	False	NA	NA	NA	46617030	46612227	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_46612345_46613693
H1_mix_00053721	chr2	-	4087	3	FSM	ENSG00000180398.13	ENST00000444761.6	4169	3	82	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	361	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAGTTGATTTTGTTCAC	-1	True	NA	-1	True	AATAAA	-20	NA	46941773	46901869	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_46905595_46907809_46907970_46941571
H1_mix_00053726	chr2	-	2114	3	NNC	ENSG00000184261.5	novel	13564	2	NA	NA	0	18995	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	344.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATTTGAGTCATACCCAA	-36	True	NA	NA	False	NA	NA	NA	47570985	47490294	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_47490326_47520770_47521809_47569940
H1_mix_00053727	chr2	-	3923	22	FSM	ENSG00000138081.22	ENST00000683894.1	3906	22	0	-17	0	0	multi-exon	FALSE	canonical	3	128	junction_21	35.722348296276	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTCTGAATTTACCACC	915	False	NA	-14	True	AATAAA	-17	NA	47905580	47806919	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_47808428_47809157_47809267_47809599_47809708_47810315_47810427_47813233_47813378_47813790_47813868_47818778_47818865_47818955_47819079_47820361_47820457_47822217_47822304_47823142_47823361_47832348_47832487_47832571_47832679_47832768_47832881_47832963_47833071_47834578_47834712_47834787_47834872_47835871_47836002_47838858_47839004_47839418_47839501_47839641_47839770_47905488
H1_mix_00053729	chr2	-	1986	14	FSM	ENSG00000138081.22	ENST00000493962.6	1986	14	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_6	21.956654448167	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTTCAACTGTGTTTGT	NA	False	NA	-8	True	AGTAAA	-19	NA	47835962	47812848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_47813378_47813790_47813868_47818778_47818865_47818955_47819079_47820361_47820457_47822217_47822304_47823142_47823361_47832348_47832487_47832571_47832679_47832768_47832881_47832963_47833071_47834578_47834712_47834787_47834872_47835871
H1_mix_00053730	chr2	-	3387	18	NIC	ENSG00000138081.22	novel	4760	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_15	54.91396227368	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTTCAACTGTGTTTGT	-3	True	NA	-8	True	AGTAAA	-19	NA	47906498	47812848	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_47813378_47813790_47813868_47818778_47818865_47818955_47819079_47820361_47820457_47822217_47822304_47823142_47823361_47832348_47832487_47832571_47832679_47832768_47832881_47832963_47833071_47834578_47834712_47834787_47834872_47835871_47836002_47838858_47839001_47839418_47839501_47839641_47839770_47905488
H1_mix_00053731	chr2	-	1425	3	FSM	ENSG00000138081.22	ENST00000682484.1	1567	3	147	-5	147	5	multi-exon	FALSE	canonical	3	216	junction_2	10	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTATAAGTATTGAAGTGAA	NA	False	NA	NA	False	NA	NA	NA	47820456	47817657	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_47818865_47818955_47819079_47820361
H1_mix_00053732	chr2	-	427	1	FSM	ENSG00000272663.1	ENST00000609028.1	555	1	-9	137	-9	-137	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCAGAGCTTTTTTGTGG	NA	False	NA	NA	False	NA	NA	NA	48440606	48440179	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_48440200_48440600
H1_mix_00053733	chr2	-	3315	6	FSM	ENSG00000179915.25	ENST00000342183.9	3315	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	8.05977667184395	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATACATTCACTATTTTCA	275	False	NA	NA	False	NA	NA	NA	50347754	49920762	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_49922252_49943703_49943792_50053270_50053591_50091322_50091495_50236788_50236971_50346690
H1_mix_00053734	chr2	-	1081	1	FSM	ENSG00000238165.1	ENST00000426912.1	237	1	-732	-112	-732	112	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAAACCCCATCTCTACT	NA	False	NA	NA	False	NA	NA	NA	50830410	50829329	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_50829300_50830400
H1_mix_00053735	chr2	-	1698	9	FSM	ENSG00000115239.24	ENST00000394717.3	1734	9	36	0	-20	0	multi-exon	FALSE	canonical	3	18	junction_8	77.3397536846349	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-21	True	NA	NA	False	NA	NA	NA	53786973	53670318	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_53670691_53693883_53694015_53700270_53700529_53714383_53714582_53716565_53716744_53728711_53728848_53729457_53729571_53750782_53750942_53786820
H1_mix_00053736	chr2	-	620	5	FSM	ENSG00000115239.24	ENST00000480522.5	620	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	114.632837790923	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTATTTGTGGCTGCTCAG	NA	False	NA	NA	False	NA	NA	NA	53765561	53728771	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_53728848_53729457_53729571_53748280_53748368_53750782_53750942_53765376
H1_mix_00053737	chr2	-	5924	46	NIC	ENSG00000068878.15	novel	7250	47	NA	NA	211	-3	combination_of_known_splicesites	FALSE	canonical	3	7	junction_10	52.5487662986123	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGACTGGCTGTTTTTTCC	1351	False	NA	-37	True	AATAAA	-20	NA	53970567	53864863	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_53865574_53866084_53866224_53866746_53866881_53869375_53869539_53874338_53874495_53875626_53875756_53885689_53885776_53887258_53887468_53887857_53887990_53888720_53888813_53892807_53892961_53893673_53893800_53895006_53895077_53895582_53895737_53896803_53896886_53897869_53898000_53898300_53898355_53899880_53900018_53901349_53901560_53904024_53904157_53906597_53906694_53906805_53906869_53908319_53908419_53908509_53908566_53908783_53908841_53910074_53910131_53919150_53919247_53920192_53920351_53920888_53921105_53922516_53922585_53923048_53923119_53923320_53923420_53925538_53925690_53925958_53926024_53927393_53927484_53928116_53928304_53931834_53932101_53932667_53932761_53934604_53934728_53936086_53936162_53936763_53936828_53937390_53937541_53939955_53940001_53948420_53948538_53949142_53949284_53970542
H1_mix_00053738	chr2	-	2283	9	NNC	ENSG00000115310.19	novel	4697	9	NA	NA	0	86025	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	597.494756776158	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAGGTTAAAAAAAAAAAA	0	True	NA	NA	False	AAGAAA	-17	NA	55050451	54886161	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_54886181_54922933_54922959_54972189_54973199_54973562_54973622_54973820_54973868_54974694_54974765_54982514_54982654_54987490_54987699_55049744
H1_mix_00053741	chr2	-	2902	7	NIC	ENSG00000162994.16	novel	1777	11	NA	NA	-4723	-6	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	7.97217382873426	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGACATTTAGATTTGTC	NA	False	NA	-11	True	AATAAA	-43	NA	55214375	55175654	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_55175987_55177601_55177782_55180509_55180713_55181569_55181745_55206269_55206377_55209629_55209832_55212672
H1_mix_00053742	chr2	-	2491	16	NNC	ENSG00000085760.15	novel	2536	16	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_12	48.6042522145268	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGTTGTTTGTTTGAAGG	15	True	NA	-2	True	ATTAAA	-16	NA	55269216	55236620	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_55236821_55237287_55237429_55240010_55240176_55242939_55243081_55243415_55243669_55244028_55244234_55246336_55246462_55249394_55249535_55252476_55252654_55254040_55254202_55254653_55254826_55262315_55262424_55263639_55263866_55267568_55267636_55268577_55268740_55269168
H1_mix_00053743	chr2	-	2564	17	NNC	ENSG00000085760.15	novel	2536	16	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_14	65.6105638883709	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGTTGTTTGTTTGAAGG	12	True	NA	-2	True	ATTAAA	-16	NA	55269219	55236620	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_55236821_55237287_55237429_55240010_55240176_55242939_55243081_55243415_55243669_55244028_55244234_55246336_55246462_55249394_55249535_55252476_55252654_55254040_55254202_55254653_55254826_55262315_55262428_55263639_55263866_55266380_55266519_55267568_55267636_55268649_55268740_55269168
H1_mix_00053745	chr2	-	10517	32	NIC	ENSG00000115355.18	novel	9751	33	NA	NA	-119	97	intron_retention	FALSE	canonical	3	44	junction_21	24.9709091931255	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGTTTAGTTGATTCTG	NA	False	NA	63	True	NA	NA	NA	55420014	55287744	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_55291776_55295596_55296057_55296257_55296524_55299838_55299920_55301205_55301278_55301871_55302073_55303068_55303153_55308808_55309024_55309161_55309255_55312433_55312580_55315927_55316115_55317205_55317350_55317563_55317842_55318842_55319005_55322527_55322693_55328293_55328436_55332565_55332694_55334093_55335165_55336680_55336819_55339463_55339649_55343647_55343793_55344367_55344515_55346174_55346334_55349517_55349600_55355578_55355752_55362307_55362449_55363949_55364034_55372451_55372511_55374813_55374884_55388777_55388887_55418815_55418917_55419016
H1_mix_00053746	chr2	-	6964	33	FSM	ENSG00000115355.18	ENST00000642200.1	6958	33	0	-6	0	0	multi-exon	FALSE	canonical	2	15	junction_1	26.8929990599319	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGTTAGTAATCATTTAAA	-22	True	NA	-34	True	AATAAA	-25	NA	55419878	55287841	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_55288356_55291675_55291776_55295596_55296057_55296257_55296524_55299838_55299920_55301205_55301278_55301871_55302073_55303068_55303153_55308808_55309024_55309161_55309255_55312433_55312580_55315927_55316115_55317205_55317350_55317563_55317842_55318842_55319005_55322527_55322693_55328293_55328436_55332565_55332694_55334093_55335165_55336680_55336819_55339463_55339649_55343647_55343793_55344367_55344515_55346174_55346334_55349517_55349600_55355578_55355752_55362307_55362449_55363949_55364034_55372451_55372511_55374813_55374884_55388777_55388887_55418815_55418917_55419016
H1_mix_00053747	chr2	-	9552	34	FSM	ENSG00000115355.18	ENST00000413716.7	9545	34	0	-7	0	1	multi-exon	FALSE	canonical	3	9	junction_3	26.9662919198798	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTTAGTAATCATTTAAAA	-22	True	NA	-33	True	AATAAA	-26	NA	55419878	55287840	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_55291165_55291675_55291776_55295596_55295728_55295949_55296057_55296257_55296524_55299838_55299920_55301205_55301278_55301871_55302073_55303068_55303153_55308808_55309024_55309161_55309255_55312433_55312580_55315927_55316115_55317205_55317350_55317563_55317842_55318842_55319005_55322527_55322693_55328293_55328436_55332565_55332694_55334093_55335165_55336680_55336819_55339463_55339649_55343647_55343793_55344367_55344515_55346174_55346334_55349517_55349600_55355578_55355752_55362307_55362449_55363949_55364034_55372451_55372511_55374813_55374884_55388777_55388887_55418815_55418917_55419016
H1_mix_00053749	chr2	-	5120	17	FSM	ENSG00000115355.18	ENST00000426576.6	5120	17	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_15	17.7014079595381	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTCCTTTGTAATCAC	5280	False	NA	-29	True	AAGAAA	-30	NA	55334345	55293552	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_55296057_55296257_55296524_55299838_55299920_55301205_55301278_55301871_55302073_55303068_55303153_55308808_55309024_55309161_55309255_55312433_55312580_55315927_55316115_55317205_55317350_55317563_55317842_55318842_55319005_55322527_55322693_55328293_55328436_55332565_55332694_55334093
H1_mix_00053750	chr2	-	7559	29	NIC	ENSG00000115355.18	novel	9699	32	NA	NA	7	-619	intron_retention	FALSE	canonical	3	13	junction_2	27.0795313919603	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTGGAAATTTGTATTT	29	True	NA	-8	True	AATAAA	-16	NA	55419827	55294171	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_55296057_55296257_55296524_55301205_55301278_55301871_55302073_55308808_55309024_55309161_55309255_55312433_55312580_55315927_55316115_55317205_55317350_55317563_55317842_55318842_55319005_55322527_55322693_55328293_55328436_55332565_55332694_55334093_55335165_55336680_55336819_55339463_55339649_55343647_55343793_55344367_55344515_55346174_55346334_55349517_55349600_55355578_55355752_55362307_55362449_55363949_55364034_55372451_55372511_55374813_55374884_55388777_55388887_55418815_55418917_55419016
H1_mix_00053753	chr2	-	235	1	FSM	ENSG00000115355.18	ENST00000642514.1	2029	1	1298	496	1298	-496	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTCTCTTTTGGGGAAC	2288	False	NA	NA	False	AATAAA	-2	NA	55417653	55417418	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_55417400_55417700
H1_mix_00053754	chr2	-	5664	17	NNC	ENSG00000275052.5	novel	5506	17	NA	NA	-179	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	113.437689393781	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGTTTTAATCACTA	1073	False	NA	0	True	AATAAA	-18	NA	55617801	55547291	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_55550007_55558774_55558969_55564312_55564477_55564901_55565042_55568193_55568364_55573618_55573778_55577314_55577357_55578246_55578343_55579678_55579782_55581566_55581699_55585050_55585168_55586617_55586735_55588878_55588957_55598415_55599040_55603977_55604077_55615450_55615507_55617143
H1_mix_00053756	chr2	-	2981	3	FSM	ENSG00000275052.5	ENST00000612688.1	2981	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	192.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTATTATTACAAAGTCT	-6	True	NA	NA	False	AATAAA	-17	NA	55618880	55614175	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_55615507_55617143_55617979_55618065
H1_mix_00053757	chr2	-	3330	26	NIC	ENSG00000138035.15	novel	4549	28	NA	NA	26	-3	combination_of_known_junctions	FALSE	canonical	2	8	junction_25	88.8525430136921	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTAGAATGTGTAATCT	40	False	NA	-1	True	AGTAAA	-17	NA	55693797	55635096	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_55636393_55637551_55637600_55640626_55640706_55643157_55643214_55643318_55643426_55644636_55644721_55645348_55645433_55646258_55646323_55646414_55646487_55647346_55647454_55654899_55654954_55656130_55656221_55656304_55656372_55660156_55660194_55661955_55662027_55666990_55667094_55667861_55667959_55671318_55671377_55671994_55672047_55672892_55673080_55679681_55679796_55680711_55680760_55680854_55680919_55683784_55683835_55684942_55685049_55693662
H1_mix_00053758	chr2	-	2943	27	NIC	ENSG00000138035.15	novel	4549	28	NA	NA	2	-466	combination_of_known_splicesites	FALSE	canonical	2	14	junction_5	87.0328527374652	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCGGATCATGAGATCAGG	16	True	NA	NA	False	NA	NA	NA	55693821	55635559	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_55636393_55637551_55637600_55640626_55640706_55643157_55643214_55643318_55643426_55645348_55645433_55646258_55646323_55646414_55646487_55647346_55647454_55654899_55654954_55656130_55656221_55656304_55656372_55660156_55660194_55661955_55662027_55666990_55667094_55667861_55667959_55671318_55671377_55671994_55672047_55672892_55673080_55679681_55679796_55680711_55680760_55680854_55680919_55683784_55683835_55684942_55685049_55686369_55686445_55687644_55687706_55693662
H1_mix_00053760	chr2	-	1013	10	NNC	ENSG00000138035.15	novel	3596	27	NA	NA	-1015	-11	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	118.633890604667	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTCACCAAAACCGATCCT	NA	False	NA	NA	False	NA	NA	NA	55672383	55647411	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_55647454_55654899_55654954_55656130_55656221_55656304_55656372_55660151_55660194_55661955_55662027_55666990_55667094_55667861_55667959_55671318_55671377_55671994
H1_mix_00053768	chr2	-	1325	4	FSM	ENSG00000119866.22	ENST00000642439.1	1325	4	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	187.64742352496	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGTGTTTGCTTGTTCTT	1892	False	NA	-7	True	AATAAA	-14	NA	60553558	60452157	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_60452667_60462281_60462425_60545970_60546301_60553215
H1_mix_00053771	chr2	-	3510	1	FSM	ENSG00000119866.22	ENST00000645224.1	3727	1	11	206	11	-206	mono-exon	FALSE	NA	NA	NA	NA	NA	447	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATATGTGTTCCTTGTA	4295	False	NA	NA	False	AATGAA	-8	NA	60528204	60524694	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_60524700_60528200
H1_mix_00053773	chr2	-	1231	1	FSM	ENSG00000237522.1	ENST00000414613.1	1231	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAATAAAGCTGCAGTGTC	NA	False	NA	NA	False	NA	NA	NA	60938049	60936818	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_60936800_60938000
H1_mix_00053774	chr2	-	321	1	FSM	ENSG00000232713.2	ENST00000451515.2	401	1	66	14	66	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTCAAATGCAAGAAATGAA	NA	False	NA	NA	False	NA	NA	NA	60938538	60938217	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_60938200_60938500
H1_mix_00053776	chr2	-	2708	24	FSM	ENSG00000115464.15	ENST00000453734.1	2708	24	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_21	18.0140671769895	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGCGTGCATTCGTTCTT	NA	False	NA	NA	False	AGTAAA	-14	NA	61280333	61226787	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61227219_61228644_61228720_61228826_61228996_61229547_61229634_61232451_61232533_61235844_61235911_61236025_61236074_61236160_61236237_61236324_61236390_61241559_61241656_61241765_61241820_61245209_61245289_61246323_61246478_61248510_61248684_61256383_61256479_61256872_61256951_61257051_61257109_61257203_61257351_61259710_61259777_61265396_61265558_61265983_61266168_61278164_61278286_61278387_61278444_61280243
H1_mix_00053779	chr2	-	4449	25	NNC	ENSG00000082898.19	novel	4417	25	NA	NA	0	74491	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	351.709513088887	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGCCAGGTACAGTGGCT	4707	False	NA	NA	False	NA	NA	NA	61533903	61401540	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_61401566_61477617_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771
H1_mix_00053781	chr2	-	6776	24	FSM	ENSG00000082898.19	ENST00000428210.5	6776	24	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_21	433.547781264005	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCCTTTATTGACTCAT	2	True	NA	-14	True	AATAAA	-16	NA	61538231	61477933	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61525269_61525334_61525491_61526522_61533771_61533904_61537561
H1_mix_00053782	chr2	-	5834	23	FSM	ENSG00000082898.19	ENST00000677290.1	5834	23	0	0	0	0	multi-exon	FALSE	canonical	1	410	junction_16	245.255896046261	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTTATTTTTCCTTTAT	830	False	NA	-22	True	AATAAA	-8	NA	61537780	61477941	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61478967_61481184_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61537561
H1_mix_00053787	chr2	-	2070	15	NNC	ENSG00000115484.15	novel	2376	14	NA	NA	0	52551	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	766.247592132582	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATCTTTCAGGGTGGACA	-29	True	NA	NA	False	AAAAAG	-2	NA	61888656	61815533	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_61815568_61868424_61868707_61869439_61869554_61872081_61872317_61872457_61872589_61873001_61873113_61873196_61873294_61876094_61876235_61876919_61877053_61877392_61877515_61878868_61879012_61880285_61880395_61883458_61883549_61885019_61885073_61888380
H1_mix_00053791	chr2	-	1651	2	FSM	ENSG00000231609.7	ENST00000412297.1	396	2	0	-1255	0	1	multi-exon	FALSE	canonical	2	7	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCATGGCCACTGACTCC	3996	False	NA	NA	False	NA	NA	NA	63046609	63043920	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_63045444_63046481
H1_mix_00053792	chr2	-	830	2	FSM	ENSG00000143951.16	ENST00000462652.1	830	2	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATTGCAGAAGTTAAAGG	NA	False	NA	NA	False	AAGAAA	-1	NA	63382074	63377848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_63378510_63381905
H1_mix_00053793	chr2	-	3747	22	NIC	ENSG00000143952.20	novel	4337	23	NA	NA	83	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_14	36.1670977120932	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGGAATTCAATTTTTGT	217	False	NA	0	True	AATAAA	-20	NA	64019345	63892900	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_63893536_63897495_63897591_63899473_63899582_63912344_63912426_63912539_63912662_63913222_63913311_63914181_63914288_63916899_63916964_63919882_63919996_63920445_63920628_63921205_63921336_63933672_63934014_63942464_63942562_63944599_63944656_63949036_63949164_63962057_63962444_63965834_63965967_63968956_63968992_63972165_63972245_63981645_63981852_63983863_63984020_64018937
H1_mix_00053795	chr2	-	3517	8	NNC	ENSG00000197329.12	novel	3716	7	NA	NA	0	3709	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	179.534090901751	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGAGTTTTCCTAATAATCG	-1	True	NA	NA	False	AAAAAG	-2	NA	64144396	64088942	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_64088973_64092856_64095269_64096124_64096314_64096412_64096611_64100397_64100500_64104700_64104831_64108239_64108380_64144080
H1_mix_00053796	chr2	-	3559	9	NNC	ENSG00000197329.12	novel	3716	7	NA	NA	0	3709	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	238.373099100968	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGAGTTTTCCTAATAATCG	-1	True	NA	NA	False	AAAAAG	-2	NA	64144396	64088942	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_64088970_64092855_64095269_64096124_64096314_64096412_64096611_64100397_64100500_64104553_64104598_64104700_64104831_64108239_64108380_64144080
H1_mix_00053797	chr2	-	1745	1	Genic_Genomic	ENSG00000237638.3	novel	NA	NA	NA	NA	-2759	190	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTTGTTTGTCTGATG	NA	False	NA	NA	False	AATAAA	-18	NA	64954807	64953062	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr2_-_64953100_64954800
H1_mix_00053798	chr2	-	582	1	FSM	ENSG00000227394.1	ENST00000455212.1	582	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAAGCAGGGGGAAAGGAA	NA	False	NA	NA	False	AATACA	-13	NA	64960634	64960052	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_64960100_64960600
H1_mix_00053799	chr2	-	1188	2	ISM	ENSG00000236780.7	ENST00000657304.1	1230	5	35263	-349	-225	40	3prime_fragment	FALSE	canonical	3	30	junction_1	0	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATTGAATTTAATCTTT	NA	False	NA	1	True	AATAAA	-19	NA	67178217	67175147	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_67175700_67177581
H1_mix_00053802	chr2	-	756	7	NIC	ENSG00000169599.13	novel	898	8	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	3	27	junction_5	119.438617428926	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCATGTTTGCTTTACCT	593	False	NA	-20	True	AATAAA	-30	NA	69437422	69396118	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_69396291_69400363_69400539_69406021_69406083_69415184_69415300_69419537_69419605_69431901_69432006_69437360
H1_mix_00053803	chr2	-	1035	8	FSM	ENSG00000169599.13	ENST00000303698.7	1034	8	0	-1	0	1	multi-exon	FALSE	canonical	3	15	junction_7	118.802185096376	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCATGTTTGCTTTACCT	540	False	NA	-20	True	AATAAA	-30	NA	69437475	69396118	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_69396291_69400363_69400539_69406021_69406083_69415184_69415300_69419537_69419605_69423581_69423718_69431901_69432006_69437270
H1_mix_00053804	chr2	-	220	1	FSM	ENSG00000232228.1	ENST00000441658.1	318	1	224	-126	224	126	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCGGCCTGTGGTAATTA	4544	False	NA	NA	False	NA	NA	NA	69594834	69594614	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_69594600_69594800
H1_mix_00053806	chr2	-	1773	1	FSM	ENSG00000244617.3	ENST00000320256.6	1543	1	-430	200	-430	-200	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAAAGCCTGTCTTAGTT	NA	False	NA	NA	False	NA	NA	NA	69962061	69960288	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_69960300_69962100
H1_mix_00053807	chr2	-	3839	5	FSM	ENSG00000179818.16	ENST00000425601.6	2393	5	-614	-832	0	824	multi-exon	TRUE	canonical	3	28	junction_1	10.6301458127346	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGCTGGATTGCCAC	8420	False	NA	NA	False	AATAAA	-40	NA	70086899	70029172	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70031932_70032132_70032256_70051202_70051306_70085546_70085625_70086123
H1_mix_00053808	chr2	-	3126	5	FSM	ENSG00000179818.16	ENST00000425333.5	546	5	0	-2580	0	824	multi-exon	FALSE	canonical	3	13	junction_4	14.9227175809234	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGCTGGATTGCCAC	7976	False	NA	NA	False	AATAAA	-40	NA	70087343	70029172	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70031932_70032132_70032256_70051202_70051306_70085546_70085625_70087280
H1_mix_00053809	chr2	-	544	4	FSM	ENSG00000179818.16	ENST00000416506.5	542	4	0	-2	0	-1	multi-exon	TRUE	canonical	3	10	junction_3	9.42809041582063	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATAGTTTGTGGTAATTT	NA	False	NA	-5	True	AATAAA	-18	NA	70055823	70048688	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70048958_70051202_70051306_70053730_70053793_70055713
H1_mix_00053810	chr2	-	2108	5	FSM	ENSG00000179818.16	ENST00000655481.1	2105	5	0	-3	0	-1	multi-exon	FALSE	canonical	3	14	junction_2	8.64580823289529	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATAGTTTGTGGTAATTT	9014	False	NA	-5	True	AATAAA	-18	NA	70086305	70048688	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70050253_70051202_70051306_70083506_70083688_70085546_70085625_70086123
H1_mix_00053812	chr2	-	569	4	FSM	ENSG00000179818.16	ENST00000690924.1	605	4	32	4	1	0	multi-exon	FALSE	canonical	3	28	junction_3	11.8133634311129	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATATAGTTTGTGGTAAT	9075	False	NA	-7	True	AATAAA	-16	NA	70086244	70048690	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70048958_70051202_70051306_70085546_70085625_70086123
H1_mix_00053814	chr2	-	2564	10	NIC	ENSG00000115998.8	novel	2524	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_9	11.8675821536166	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATATCTCATGGTTGCCTG	11	True	NA	NA	False	AATAAA	-24	NA	70191004	70149884	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_70150565_70160624_70160788_70165091_70165193_70165527_70165636_70169556_70169662_70175672_70175778_70179531_70179643_70181162_70181998_70182666_70182936_70190917
H1_mix_00053815	chr2	-	548	3	FSM	ENSG00000115998.8	ENST00000428010.5	548	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	13.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGAAGCTGTCAAAATCAT	11	True	NA	NA	False	NA	NA	NA	70191004	70181805	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70181998_70182666_70182936_70190917
H1_mix_00053818	chr2	-	1032	10	NIC	ENSG00000116001.17	novel	4634	13	NA	NA	4	-15	combination_of_known_junctions	FALSE	canonical	3	15	junction_8	152.157812812882	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTTTCCTCCAAAATAT	14	True	NA	-18	True	AATAAA	-12	NA	70248618	70216133	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_70216293_70216403_70216500_70216885_70216995_70224553_70224630_70227734_70227823_70229058_70229092_70229263_70229319_70230755_70230855_70236072_70236176_70248404
H1_mix_00053824	chr2	-	904	8	FSM	ENSG00000116001.17	ENST00000477044.6	904	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	202.257161019514	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTCTGTTTTGTCTGTT	21	True	NA	-7	True	AATAAA	-15	NA	70248611	70224423	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70224630_70227734_70227823_70228343_70228463_70229058_70229092_70229263_70229319_70230755_70230855_70236078_70236176_70248404
H1_mix_00053825	chr2	-	461	5	NNC	ENSG00000143977.14	novel	527	5	NA	NA	0	28141	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2854.66158239466	379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTACATGTACCAGGATACA	-6	True	NA	NA	False	NA	NA	NA	70293730	70253220	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_70253247_70281510_70281685_70288067_70288193_70289349_70289373_70293617
H1_mix_00053826	chr2	-	311	3	FSM	ENSG00000143977.14	ENST00000488400.1	393	3	0	82	0	-82	multi-exon	FALSE	canonical	3	4036	junction_1	106	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTATTAACTTTCCTGGT	-6	True	NA	NA	False	AGTAAA	-42	NA	70293730	70288017	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70288193_70289349_70289373_70293617
H1_mix_00053828	chr2	-	518	3	FSM	ENSG00000035141.8	ENST00000438759.1	518	3	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_2	1130.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATGCTGGGAGTAAGGAG	72	False	NA	-98	True	NA	NA	NA	70301994	70297425	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70297478_70300839_70300981_70301669
H1_mix_00053831	chr2	-	4225	4	FSM	ENSG00000144043.12	ENST00000489894.5	590	4	0	-3635	0	0	multi-exon	FALSE	canonical	3	136	junction_1	9.7410927974683	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTGTAGTGATGTGTAC	-4	True	NA	NA	False	AATAAA	-16	NA	70994803	70985941	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70989817_70991829_70991984_70993695_70993776_70994687
H1_mix_00053832	chr2	-	553	1	FSM	ENSG00000272735.1	ENST00000608897.1	607	1	-4	58	-4	-58	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCTACCCTACCACGTT	404	False	NA	NA	False	NA	NA	NA	71068129	71067576	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_71067600_71068100
H1_mix_00053833	chr2	-	7208	5	NNC	ENSG00000124374.9	novel	6300	4	NA	NA	0	99389	at_least_one_novel_splicesite	TRUE	canonical	3	154	junction_1	33.3953589589931	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCCCTAATCATTACTTG	-20	True	NA	NA	False	TATAAA	-16	NA	71227103	71083348	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_71083612_71182092_71188536_71189844_71190022_71202451_71202601_71226927
H1_mix_00053834	chr2	-	6327	5	NNC	ENSG00000124374.9	novel	6300	4	NA	NA	0	83322	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	97.6089135274028	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTCTCCACAGCACCCCT	-20	True	NA	NA	False	NA	NA	NA	71227103	71099415	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_71099443_71182737_71188536_71189844_71190022_71202451_71202601_71226927
H1_mix_00053835	chr2	-	6326	5	NNC	ENSG00000124374.9	novel	6300	4	NA	NA	0	83322	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	97.6089135274028	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTCTCCACAGCACCCCT	-20	True	NA	NA	False	NA	NA	NA	71227103	71099415	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_71099443_71182738_71188536_71189844_71190022_71202451_71202601_71226927
H1_mix_00053837	chr2	-	253	1	FSM	ENSG00000233971.1	ENST00000451209.1	253	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAAGTCAACTATTTTAAT	NA	False	NA	NA	False	NA	NA	NA	71984434	71984181	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_71984200_71984400
H1_mix_00053841	chr2	-	2927	9	FSM	ENSG00000144040.13	ENST00000450185.5	2975	9	0	48	0	-48	multi-exon	FALSE	canonical	1	2	junction_4	94.4722181384559	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGACTGGGCGACAGAGC	12	True	NA	NA	False	NA	NA	NA	73071709	72996559	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_72999015_73000430_73000488_73001524_73001579_73020238_73020265_73023187_73023215_73040853_73040932_73041606_73041662_73058527_73058597_73071603
H1_mix_00053846	chr2	-	544	5	FSM	ENSG00000144034.16	ENST00000484969.5	592	5	0	48	0	-48	multi-exon	FALSE	canonical	2	3	junction_1	407.766170740046	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTGGTCTCAAAATCCTG	-14	True	NA	45	True	NA	NA	NA	73737358	73729281	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_73729306_73730559_73730737_73732162_73732286_73734428_73734592_73737301
H1_mix_00053847	chr2	-	560	5	FSM	ENSG00000144034.16	ENST00000463231.5	575	5	14	1	-3	-1	multi-exon	FALSE	canonical	2	3	junction_1	433.049073431638	1717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCTTGGTGATTTT	-17	True	NA	NA	False	TTTAAA	-1	NA	73737361	73729169	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_73729306_73730559_73730737_73732162_73732286_73734527_73734592_73737301
H1_mix_00053849	chr2	-	1941	6	FSM	ENSG00000144048.10	ENST00000443070.5	2175	6	1	233	1	-233	multi-exon	FALSE	canonical	0	0	junction_1	100.073972640242	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGTGACTCCCAAGTTT	NA	False	NA	NA	False	AAGAAA	-11	NA	73780120	73767651	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_73768953_73769264_73769326_73773799_73773924_73774912_73775045_73778300_73778377_73779873
H1_mix_00053850	chr2	-	868	2	FSM	ENSG00000237883.3	ENST00000667561.2	893	2	25	0	25	0	multi-exon	FALSE	canonical	1	2	junction_1	0	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAATTTCGTCTGCTTTT	4930	False	NA	NA	False	AAAAAG	-39	NA	73981388	73947321	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_73947936_73981134
H1_mix_00053851	chr2	-	523	2	FSM	ENSG00000237883.3	ENST00000413452.2	745	2	219	3	20	-3	multi-exon	TRUE	canonical	3	12	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTTGAGGTTTCTCTTC	4925	False	NA	-1	True	AATAAA	-16	NA	73981393	73957969	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_73958208_73981108
H1_mix_00053852	chr2	-	4844	7	NNC	ENSG00000114978.18	novel	4896	6	NA	NA	0	76091	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	401.551435753324	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAATGAACCTGAATAGGT	-15	True	NA	NA	False	AATAAA	-41	NA	74178866	74076436	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_74076468_74152597_74156646_74159090_74159255_74165217_74165352_74167013_74167108_74172585_74172753_74178660
H1_mix_00053858	chr2	-	489	5	FSM	ENSG00000188687.17	ENST00000444570.5	552	5	63	0	-6	0	multi-exon	FALSE	canonical	1	2	junction_1	1	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGCGAACGCTGGAGCAAGC	60	False	NA	NA	False	GATAAA	-25	NA	74328172	74265231	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74265265_74285772_74285903_74304488_74304681_74314944_74315026_74328119
H1_mix_00053859	chr2	-	4569	31	FSM	ENSG00000204843.13	ENST00000394003.7	4479	31	60	-150	4	150	multi-exon	FALSE	canonical	1	2	junction_27	402.898630757994	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTTACTCTAACCAAGG	7	True	NA	NA	False	NA	NA	NA	74380295	74361003	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74361637_74362051_74362142_74362649_74362730_74362993_74363178_74363293_74363428_74363613_74363629_74365074_74365242_74365514_74365658_74365892_74366019_74366243_74366376_74366458_74366621_74366782_74366933_74367044_74367108_74367351_74367421_74367695_74367865_74367970_74368132_74368727_74368881_74369097_74369215_74369299_74369492_74369964_74370070_74370185_74370346_74370465_74370545_74370620_74370826_74370978_74371177_74371536_74371729_74372927_74372949_74374322_74374341_74377431_74377467_74377647_74377727_74377999_74378246_74380004
H1_mix_00053864	chr2	-	2160	13	NNC	ENSG00000114993.17	novel	2221	12	NA	NA	0	5062	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	115.068819987577	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAAGAAAACG	18	True	NA	NA	False	NA	NA	NA	74441898	74420772	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_74420801_74425884_74426575_74427168_74427274_74427423_74427593_74428267_74428397_74428630_74428738_74428847_74428943_74429827_74430038_74430251_74430370_74430464_74430519_74430615_74430678_74432466_74432667_74441705
H1_mix_00053869	chr2	-	2413	2	FSM	ENSG00000115275.15	ENST00000462189.1	2400	2	0	-13	0	0	multi-exon	FALSE	canonical	3	234	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTTTGCCAGATTTGCC	9021	False	NA	0	True	AATAAA	-25	NA	74463646	74461056	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74463013_74463189
H1_mix_00053872	chr2	-	394	2	FSM	ENSG00000204822.7	ENST00000409710.1	386	2	23	-31	0	27	multi-exon	FALSE	canonical	3	11	junction_1	0	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGTCTGGATGAACCTGA	3	True	NA	-19	True	TTTAAA	-43	NA	74472664	74471954	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74472253_74472568
H1_mix_00053873	chr2	-	1574	12	FSM	ENSG00000115307.17	ENST00000425118.5	1581	12	0	7	0	0	multi-exon	FALSE	canonical	3	81	junction_2	237.320684808587	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCATCTGTTGTCTCTCTCG	1196	False	NA	-25	True	ATTAAA	-19	NA	74529760	74526651	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74526837_74526940_74527122_74527247_74527364_74527470_74527591_74527735_74527839_74527939_74528007_74528247_74528322_74528416_74528490_74528750_74528936_74529131_74529283_74529361_74529500_74529579
H1_mix_00053879	chr2	-	710	4	FSM	ENSG00000115318.12	ENST00000481835.2	710	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	72.2511053356433	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAAGGAGGGGGTGATGC	6128	False	NA	NA	False	NA	NA	NA	74549576	74535288	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_74535455_74535995_74536151_74536290_74536472_74549368
H1_mix_00053881	chr2	-	492	3	FSM	ENSG00000115363.14	ENST00000486489.1	524	3	26	6	1	-6	multi-exon	FALSE	canonical	0	0	junction_2	7.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCAGTATTTTGTTTATC	8420	False	NA	-17	True	AATAAA	-10	NA	75561297	75558488	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_75558700_75560679_75560920_75561256
H1_mix_00053882	chr2	-	3649	13	FSM	ENSG00000005436.14	ENST00000470197.5	3648	13	0	-1	0	0	multi-exon	FALSE	canonical	3	8	junction_10	46.7270442748808	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACTTAAACTGCTATAGT	9633	False	NA	-3	True	ATTAAA	-21	NA	75701372	75662704	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_75664784_75665928_75666054_75670137_75670285_75671949_75672017_75673443_75673521_75680192_75680315_75687826_75687978_75689025_75689226_75689968_75690082_75690637_75690720_75694240_75694428_75696199_75696316_75701189
H1_mix_00053883	chr2	-	1225	3	NNC	ENSG00000005436.14	novel	1066	3	NA	NA	-49	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_1	70	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTAAGCCTTAAAGGACTG	NA	False	NA	NA	False	AATAAA	-20	NA	75711034	75701795	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_75702448_75706522_75706652_75710590
H1_mix_00053885	chr2	-	485	2	FSM	ENSG00000176204.14	ENST00000456154.1	485	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTGCAGATGTGATGGCA	NA	False	NA	NA	False	NA	NA	NA	77593196	77519761	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_77519865_77592814
H1_mix_00053886	chr2	-	2128	2	FSM	ENSG00000162951.11	ENST00000409148.1	2126	2	0	-2	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACAGACTGGTGTAACCT	454	False	NA	NA	False	AATAAA	-16	NA	80304274	80301877	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_80303879_80304147
H1_mix_00053887	chr2	-	2699	2	ISM	ENSG00000162951.11	ENST00000416268.1	879	3	-98	-1273	37	0	intron_retention	FALSE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACAGACTGGTGTAACCT	35	False	NA	NA	False	AATAAA	-16	NA	80304693	80301877	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_80303879_80303995
H1_mix_00053888	chr2	-	359	1	FSM	ENSG00000235847.2	ENST00000398295.3	965	1	274	332	274	-332	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGATACAGATAAGTAACAG	NA	False	NA	NA	False	NA	NA	NA	84777949	84777590	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_84777600_84777900
H1_mix_00053889	chr2	-	1253	3	Antisense	novelGene_ENSG00000287625.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCCGTCTCAAAAAAAAAAAA	4171	False	NA	NA	False	NA	NA	NA	84967002	84961294	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_-_84962179_84962915_84963104_84966821
H1_mix_00053890	chr2	-	306	1	FSM	ENSG00000225787.1	ENST00000436601.1	306	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAACAAAGAATTTGTCC	4	False	NA	NA	False	NA	NA	NA	85102694	85102388	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_85102400_85102700
H1_mix_00053891	chr2	-	6084	5	NNC	ENSG00000152291.15	novel	6138	5	NA	NA	0	26028	intron_retention	FALSE	non_canonical	0	0	junction_1	99.1892131232021	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATACATATGACCAGTA	-6	True	NA	NA	False	NA	NA	NA	85327985	85291998	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_85292037_85318026_85322742_85324914_85324999_85326507_85327686_85327916
H1_mix_00053892	chr2	-	558	1	FSM	ENSG00000270532.1	ENST00000603980.1	558	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGTGGGTTAGCTTGGG	NA	False	NA	NA	False	NA	NA	NA	85341838	85341280	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_85341300_85341800
H1_mix_00053893	chr2	-	2335	8	FSM	ENSG00000042445.14	ENST00000429806.5	2335	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	16.3357626959118	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATTTTGGTTTTTTGTTC	3731	False	NA	3	True	AATAAA	-32	NA	85350891	85342087	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_85343382_85343638_85343799_85344238_85344349_85344593_85344733_85345974_85346095_85349383_85349582_85350039_85350242_85350779
H1_mix_00053896	chr2	-	2101	1	FSM	ENSG00000286532.1	ENST00000667933.1	1205	1	-902	6	-902	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAATGCGTGTGTAGGCT	NA	False	NA	NA	False	AATAAA	-14	NA	85539568	85537467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_85537500_85539600
H1_mix_00053897	chr2	-	2305	14	FSM	ENSG00000115486.13	ENST00000430215.7	2314	14	9	0	0	0	multi-exon	FALSE	canonical	3	71	junction_13	14.251336488764	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGGGCGGGGTTCTA	-3	True	NA	10	True	NA	NA	NA	85561523	85549829	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_85550127_85550554_85550751_85550924_85551073_85551479_85551611_85551811_85551982_85552415_85552568_85552938_85553071_85553231_85553498_85554142_85554307_85555483_85555591_85556181_85556261_85558439_85558606_85558916_85559076_85561385
H1_mix_00053901	chr2	-	1460	7	NIC	ENSG00000168890.14	novel	1553	8	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_5	45.2084677417357	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTAGCCTGTTCTGGA	9396	False	NA	-4	True	ATTAAA	-17	NA	85602653	85598546	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_85599318_85599524_85599703_85599890_85600019_85600344_85600413_85601020_85601108_85601883_85602065_85602606
H1_mix_00053903	chr2	-	1282	6	NNC	ENSG00000168890.14	novel	1553	8	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	56.2800142146393	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTAGCCTGTTCTGGA	9363	False	NA	-4	True	ATTAAA	-17	NA	85602686	85598546	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_85599318_85599524_85599703_85599890_85600019_85601020_85601108_85602026_85602065_85602606
H1_mix_00053907	chr2	-	1204	3	FSM	ENSG00000168887.11	ENST00000420686.5	1204	3	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	8.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCCCTCCCTTTCCATG	114	False	NA	-7	True	AATAAA	-38	NA	85611935	85608283	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_85609068_85609434_85609587_85611667
H1_mix_00053908	chr2	-	4653	4	FSM	ENSG00000115525.18	ENST00000639867.1	6180	4	7	1520	7	1	multi-exon	FALSE	canonical	3	24	junction_2	6.59966329107444	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGTAGTCTGGTTAATTT	2364	False	NA	-17	True	AATAAA	-15	NA	85850922	85839147	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_85840393_85844395_85844555_85846376_85846564_85847860
H1_mix_00053913	chr2	-	1750	2	FSM	ENSG00000115525.18	ENST00000487896.2	2047	2	297	0	278	0	multi-exon	FALSE	canonical	2	6	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCTGAAATTGCGCCACT	NA	False	NA	NA	False	NA	NA	NA	85853897	85850991	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_85851704_85852859
H1_mix_00053914	chr2	-	6438	34	FSM	ENSG00000068654.17	ENST00000409681.1	6454	34	16	0	16	0	multi-exon	FALSE	canonical	1	4	junction_4	26.2025731427681	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTCCCTTGGTTTGCAG	-8	True	NA	-18	True	AAGAAA	-26	NA	86106139	86026327	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_86027524_86027884_86028050_86028593_86028712_86030195_86030397_86031512_86031636_86032271_86032383_86033660_86033788_86038699_86038858_86039326_86039463_86040391_86040560_86041888_86042104_86042973_86043196_86044138_86044305_86045277_86045361_86045616_86045770_86047164_86047264_86048883_86049043_86049159_86049243_86052816_86053001_86054139_86054290_86065273_86065466_86070017_86070273_86075029_86075261_86077858_86077982_86078113_86078285_86080815_86080979_86081600_86081707_86083081_86083169_86088565_86088670_86088784_86088871_86089821_86089930_86098610_86098761_86099967_86100173_86105699
H1_mix_00053918	chr2	-	3457	15	NNC	ENSG00000132305.22	novel	2627	15	NA	NA	0	835	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_11	237.453593747649	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTACTCCATGAAGACCAC	32	True	NA	NA	False	NA	NA	NA	86195403	86143096	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_86144882_86146067_86146198_86147701_86147834_86151296_86151521_86153559_86153575_86158591_86158722_86159535_86159672_86161975_86162080_86166507_86166645_86170748_86170842_86171207_86171337_86173649_86173762_86179432_86179623_86181298_86181373_86195337
H1_mix_00053919	chr2	-	3586	15	NNC	ENSG00000132305.22	novel	2627	15	NA	NA	-87	835	at_least_one_novel_splicesite	TRUE	canonical	1	72	junction_11	228.647710485375	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTACTCCATGAAGACCAC	NA	False	NA	NA	False	NA	NA	NA	86195559	86143096	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_86144882_86146067_86146198_86147701_86147834_86151296_86151521_86153559_86153575_86158591_86158722_86159535_86159672_86161975_86162080_86166507_86166645_86170748_86170842_86171207_86171310_86173649_86173762_86179432_86179623_86181298_86181373_86195337
H1_mix_00053922	chr2	-	1063	5	FSM	ENSG00000115561.16	ENST00000409225.2	1099	5	36	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	53.1666013583716	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCATTGTAGATTGCCCTG	37	False	86563462	-3	True	AATAAA	-20	NA	86563443	86505443	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_86505950_86507478_86507594_86510357_86510480_86529217_86529398_86563303
H1_mix_00053925	chr2	-	906	1	FSM	ENSG00000231351.2	ENST00000418877.1	505	1	-307	-94	-307	94	mono-exon	FALSE	NA	NA	NA	NA	NA	2419	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCCCCACACCCCCCTC	NA	False	NA	NA	False	NA	NA	NA	86931061	86930155	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_86930200_86931100
H1_mix_00053926	chr2	-	1061	3	FSM	ENSG00000183281.15	ENST00000478636.5	2081	3	1020	0	297	0	multi-exon	TRUE	canonical	0	0	junction_1	1.5	218	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACTTGCCTATTATTTAT	4153	False	NA	NA	False	AATAAA	-41	NA	87017688	87012301	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_87013120_87016301_87016409_87017552
H1_mix_00053927	chr2	-	6716	23	NNC	ENSG00000185304.16	novel	6770	23	NA	NA	-147	-56	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_15	43.004996826719	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACAAAGCTCTTTTTTG	NA	False	NA	NA	False	ATTAAA	-31	NA	87825943	87756015	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_87757427_87772168_87772365_87774943_87775084_87782123_87784348_87785074_87785170_87788721_87788840_87791989_87792074_87792161_87792342_87793221_87793369_87793630_87793769_87794034_87794194_87795116_87795241_87795407_87795584_87795666_87795849_87797964_87798030_87800604_87800693_87806695_87806892_87811484_87811631_87811975_87812207_87816268_87816422_87816865_87816978_87818558_87818624_87825657
H1_mix_00053929	chr2	-	4524	7	FSM	ENSG00000172071.15	ENST00000684740.1	4519	7	0	-5	0	0	multi-exon	FALSE	canonical	3	155	junction_4	12.8149218578274	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTGACTCTTATTTTG	NA	False	NA	-2	True	AATAAA	-17	NA	88581581	88556740	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_88557937_88558916_88558980_88562288_88562391_88570873_88571042_88574665_88575447_88576553_88576704_88579517
H1_mix_00053930	chr2	-	1772	5	FSM	ENSG00000172071.15	ENST00000682103.1	1772	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	73.0800075259985	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTAAGTGTGTTAACTT	NA	False	NA	-71	True	TATAAA	-42	NA	88575023	88556809	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_88557937_88558916_88558980_88562288_88562345_88570873_88571042_88574665
H1_mix_00053934	chr2	-	2437	2	FSM	ENSG00000144029.12	ENST00000464458.1	648	2	-55	-1734	-55	1138	multi-exon	FALSE	canonical	3	526	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGGCTTACTGCAGTCTC	1661	False	NA	NA	False	NA	NA	NA	95106743	95102614	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_95104731_95106422
H1_mix_00053935	chr2	-	6051	5	FSM	ENSG00000144026.12	ENST00000295208.7	6189	5	138	0	138	0	multi-exon	FALSE	canonical	1	2	junction_4	3.64005494464026	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCTTACTGTAGTTATT	5955	False	NA	0	True	ATTAAA	-22	NA	95159710	95144999	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_95150268_95152673_95152770_95153132_95153260_95157350_95157440_95159239
H1_mix_00053936	chr2	-	602	1	Genic_Genomic	ENSG00000144026.12	novel	NA	NA	NA	NA	-249	-12335	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTCAGGAACAAAGCTAC	3	True	NA	-52	True	GATAAA	-5	NA	95165662	95165060	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr2_-_95165100_95165700
H1_mix_00053938	chr2	-	2745	9	NNC	ENSG00000084090.14	novel	3377	8	NA	NA	12	88436	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	657.335233632733	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAACTGCAATACTGTTTT	679	False	NA	NA	False	NA	NA	NA	96208169	96096422	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_96096449_96184858_96186915_96187216_96187302_96192368_96192469_96193077_96193161_96193241_96193353_96194957_96195008_96195340_96195550_96208144
H1_mix_00053939	chr2	-	2744	9	NNC	ENSG00000084090.14	novel	3377	8	NA	NA	12	88436	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	657.335233632733	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAACTGCAATACTGTTTT	679	False	NA	NA	False	NA	NA	NA	96208169	96096422	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_96096448_96184858_96186915_96187216_96187302_96192368_96192469_96193077_96193161_96193241_96193353_96194957_96195008_96195340_96195550_96208144
H1_mix_00053941	chr2	-	773	2	FSM	ENSG00000158050.5	ENST00000488952.1	773	2	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCAGGGCTGCTACCTCC	4003	False	NA	NA	False	NA	NA	NA	96144617	96143728	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_96144038_96144153
H1_mix_00053942	chr2	-	2949	2	FSM	ENSG00000084090.14	ENST00000479456.1	2949	2	0	0	0	0	multi-exon	FALSE	canonical	3	1897	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAAGTGTTTGTCTTT	7315	False	NA	-47	True	AATAAA	-18	NA	96188117	96184866	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_96186915_96187216
H1_mix_00053945	chr2	-	6833	46	NNC	ENSG00000144028.15	novel	7194	45	NA	NA	0	58798	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	190.006011600803	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTTAGCAGTGGAAAGAG	-4	True	NA	NA	False	NA	NA	NA	96305546	96215539	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_96215573_96274731_96275156_96275256_96275350_96276903_96276986_96277080_96277242_96277538_96277716_96277806_96277951_96278236_96278359_96278546_96278712_96278808_96278999_96279450_96279560_96281813_96281923_96283200_96283353_96283534_96283714_96283812_96284005_96284357_96284586_96285179_96285341_96286310_96286485_96286687_96286878_96287005_96287161_96287438_96287558_96287862_96287970_96288662_96288747_96289036_96289118_96289226_96289380_96289798_96289997_96290325_96290515_96290683_96290816_96291391_96291503_96291750_96291901_96292971_96293096_96293315_96293510_96295487_96295659_96296535_96296692_96296932_96297071_96297362_96297537_96297636_96297721_96298283_96298421_96298602_96298703_96298814_96298968_96299328_96299428_96300997_96301054_96301523_96301717_96303158_96303331_96304704_96304869_96305392
H1_mix_00053952	chr2	-	4965	9	FSM	ENSG00000213337.9	ENST00000443120.5	4965	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	152.26739432656	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATGAGTTTGAGACCAGG	4	True	NA	NA	False	NA	NA	NA	96858014	96836610	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_96840096_96840231_96840331_96840415_96840913_96842059_96842186_96842364_96842512_96848268_96848445_96853400_96853605_96854337_96854442_96857887
H1_mix_00053953	chr2	-	2626	2	FSM	ENSG00000168758.11	ENST00000474420.1	2625	2	0	-1	0	1	multi-exon	FALSE	canonical	3	468	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCTGATGGGGCTAAGAT	8651	False	NA	-21	True	AATAAA	-20	NA	96862447	96859734	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_96861650_96861736
H1_mix_00053955	chr2	-	1293	8	FSM	ENSG00000144199.12	ENST00000272610.3	1305	8	12	0	3	0	multi-exon	FALSE	canonical	3	112	junction_7	81.587564078387	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGCTTGTGCTGTTTGT	NA	False	NA	-2	True	AATAAA	-21	NA	97094870	97083582	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_97083818_97083947_97084036_97084168_97084278_97085698_97085862_97086138_97086199_97090108_97090326_97091461_97091713_97094700
H1_mix_00053956	chr2	-	1650	21	FSM	ENSG00000196912.13	ENST00000443455.5	1661	21	0	11	0	-11	multi-exon	FALSE	canonical	2	5	junction_4	11.9226674867665	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAGCCAGAGGAAAAAAAGA	9	True	NA	NA	False	NA	NA	NA	97589864	97547575	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_97547609_97547702_97547732_97549418_97549492_97549585_97549615_97551288_97551362_97551451_97551481_97553167_97553241_97553342_97553372_97555059_97555133_97555225_97555255_97556936_97557010_97557103_97557133_97558798_97558872_97558965_97558995_97560664_97560738_97560831_97560861_97578905_97579044_97580461_97580569_97584943_97585118_97585283_97585399_97589524
H1_mix_00053957	chr2	-	1169	15	FSM	ENSG00000196912.13	ENST00000419390.2	1169	15	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_12	9.08828579961646	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGGAGAAATATCTAGGA	457	False	NA	NA	False	AATATA	-15	NA	97589815	97551311	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_97551362_97551451_97551481_97553167_97553241_97553342_97553372_97555059_97555133_97555225_97555255_97556936_97557010_97557103_97557133_97558798_97558872_97558965_97558995_97560664_97560738_97560831_97560861_97584943_97585118_97585283_97585399_97589524
H1_mix_00053959	chr2	-	637	3	FSM	ENSG00000075568.17	ENST00000480724.1	637	3	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	1	2551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAATTCTGATTACTTAA	NA	False	NA	NA	False	AATAAA	-40	NA	97796404	97793289	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_97793554_97794929_97795116_97796217
H1_mix_00053961	chr2	-	8386	16	FSM	ENSG00000071073.13	ENST00000393487.6	8388	16	2	0	2	0	multi-exon	FALSE	canonical	3	20	junction_7	3.78887259690209	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTAGTATTTTATTATTA	-28	True	NA	-1	True	AATAAA	-17	NA	98731130	98619105	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_98625593_98625722_98625836_98635221_98635289_98636516_98636596_98639807_98640002_98640120_98640229_98643922_98644054_98645427_98645543_98655444_98655521_98656351_98656466_98658217_98658265_98663045_98663180_98675034_98675176_98678303_98678472_98726238_98726568_98731047
H1_mix_00053962	chr2	-	872	8	NNC	ENSG00000158411.11	novel	939	7	NA	NA	0	84299	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	123.578777650996	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAATGGTCCGCCTTCTC	76	False	NA	NA	False	NA	NA	NA	99180962	99077127	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_99077160_99169265_99169471_99169549_99169611_99170536_99170653_99171342_99171430_99171509_99171647_99173914_99174017_99180830
H1_mix_00053963	chr2	-	1098	8	ISM	ENSG00000135951.16	ENST00000355053.8	3037	20	51	107412	51	4105	5prime_fragment	TRUE	canonical	1	2	junction_4	4.83608882280307	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTTTTCTGTATTCAGA	27	True	NA	NA	False	TATAAA	-22	NA	99141521	99105297	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_99105437_99105526_99105698_99108832_99108992_99109388_99109513_99110849_99110916_99117543_99117760_99127047_99127177_99141427
H1_mix_00053964	chr2	-	2492	2	FSM	ENSG00000135951.16	ENST00000464459.1	2492	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAGAAAAAAATTAGC	1	True	NA	NA	False	NA	NA	NA	99141149	99124766	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_99127177_99141067
H1_mix_00053965	chr2	-	412	2	FSM	ENSG00000135951.16	ENST00000498097.5	431	2	19	0	19	0	multi-exon	FALSE	canonical	3	10	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTCTCTTTTTCTTA	324	False	NA	0	True	AATAAA	-16	NA	99154617	99148263	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_99148349_99154290
H1_mix_00053966	chr2	-	283	2	FSM	ENSG00000135951.16	ENST00000465216.1	283	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTCTCTTTTTCTTA	2	True	NA	0	True	AATAAA	-16	NA	99154890	99148263	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_99148349_99154692
H1_mix_00053967	chr2	-	989	7	NNC	ENSG00000158411.11	novel	1083	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	172.159486781556	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTGGTGTAAACCCATT	76	False	NA	0	True	AATAAA	-28	NA	99180962	99161426	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_99161669_99167648_99167848_99169549_99169611_99170536_99170653_99171509_99171647_99173914_99174017_99180830
H1_mix_00053968	chr2	-	856	7	NNC	ENSG00000158411.11	novel	939	7	NA	NA	0	316	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	150.069335826996	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCGGGCATGGTGGCAT	4	True	NA	NA	False	NA	NA	NA	99181034	99168946	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_99168978_99169265_99169471_99169549_99169611_99170536_99170653_99171509_99171647_99173914_99174017_99180830
H1_mix_00053969	chr2	-	599	2	FSM	ENSG00000115514.12	ENST00000465183.1	599	2	0	0	0	0	multi-exon	FALSE	canonical	3	602	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATGGAGGGCTAGGGAG	-23	True	NA	NA	False	AAGAAA	-42	NA	99336356	99332761	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_99333243_99336238
H1_mix_00053978	chr2	-	657	3	FSM	ENSG00000204634.13	ENST00000494011.1	660	3	0	3	0	-3	multi-exon	FALSE	canonical	3	61	junction_1	8.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTTGTTTCAAGGTGA	NA	False	NA	-15	True	ATTAAA	-12	NA	101022373	101011042	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_101011541_101021680_101021747_101022280
H1_mix_00053983	chr2	-	2343	2	FSM	ENSG00000115652.15	ENST00000473338.1	1547	2	-430	-366	-430	70	multi-exon	FALSE	canonical	3	401	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAGAATTTATTTTAAAAG	NA	False	NA	54	True	NA	NA	NA	106098140	106093237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_106094158_106096717
H1_mix_00053987	chr2	-	732	2	ISM	ENSG00000153165.19	ENST00000409886.4	7215	23	44653	12570	44566	-12570	internal_fragment	FALSE	canonical	3	81	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGCTGAATTTACTAAAGA	NA	False	NA	NA	False	NA	NA	NA	106423760	106415975	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_106415990_106423042
H1_mix_00053988	chr2	-	1534	3	ISM	ENSG00000153165.19	ENST00000409886.4	7215	23	38682	20508	38595	-20508	internal_fragment	FALSE	canonical	3	158	junction_1	0.5	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATGAACAAGTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	106429731	106423913	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_106425267_106425993_106426089_106429645
H1_mix_00053989	chr2	-	2488	7	NIC	ENSG00000144057.16	novel	6800	6	NA	NA	467	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	15.2169496140178	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTTCTTGTTTTAATTC	675	False	NA	-3	True	AATAAA	-20	NA	106886640	106801602	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_106801864_106806645_106806950_106830065_106830241_106832564_106832667_106834048_106834147_106843034_106844035_106886092
H1_mix_00053990	chr2	-	796	1	FSM	ENSG00000259863.1	ENST00000567491.1	1604	1	-140	948	-140	-948	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCCGGCTTCTGGGAGCG	NA	False	NA	NA	False	NA	NA	NA	109129070	109128274	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_109128300_109129100
H1_mix_00053994	chr2	-	452	3	Fusion	ENSG00000144061.14_ENSG00000175701.11	novel	427	2	NA	NA	0	7	multi-exon	FALSE	non_canonical	0	0	junction_1	261.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAAAGTGTTCCCAGCC	-9	True	NA	NA	False	NA	NA	NA	110212547	110122303	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr2_-_110122329_110211528_110211623_110212214
H1_mix_00053995	chr2	-	4046	20	FSM	ENSG00000144061.14	ENST00000676165.1	4050	20	4	0	-2	0	multi-exon	FALSE	canonical	2	2	junction_8	22.8424690730184	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATATTTGCAAATCATCTA	-4	True	NA	NA	False	AAGAAA	-30	NA	110205003	110123437	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_110124064_110125636_110125682_110129185_110129260_110131678_110131792_110143541_110143642_110144492_110144570_110146752_110146836_110147915_110148027_110149781_110149854_110150181_110150257_110160126_110160256_110161602_110161698_110163047_110164731_110165051_110165156_110168451_110168554_110169805_110169999_110178422_110178548_110179623_110179685_110201420_110201495_110204899
H1_mix_00053997	chr2	-	2337	2	FSM	ENSG00000175772.11	ENST00000448359.1	2443	2	106	0	106	0	multi-exon	FALSE	canonical	2	2	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAATAAACAAAAGG	NA	False	NA	NA	False	AATAAA	-11	NA	110383127	110375155	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_110377069_110382703
H1_mix_00054000	chr2	-	7121	22	NIC	ENSG00000183054.12	novel	7305	23	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_17	69.7800236506142	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACTGTCTCTTTGGGGTT	1	True	NA	NA	False	ATTAAA	-34	NA	110577184	110513801	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_110515646_110523495_110523698_110526264_110526405_110533464_110535689_110536415_110536511_110540054_110540191_110543358_110543443_110543535_110543716_110544659_110544807_110545068_110545207_110545472_110545632_110546553_110546678_110546844_110547021_110547103_110547286_110549392_110549603_110551723_110551812_110557851_110558048_110563102_110563334_110567375_110567529_110567963_110568076_110569656_110569725_110576952
H1_mix_00054001	chr2	-	7364	23	NNC	ENSG00000183054.12	novel	7305	23	NA	NA	-33835	-4	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_22	60.8681850428713	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTTTATGTTACCCACT	NA	False	NA	NA	False	ATTAAA	-20	NA	110611057	110513815	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_110515646_110523495_110523698_110526264_110526405_110533464_110535689_110536415_110536511_110540054_110540191_110543358_110543443_110543535_110543716_110544659_110544807_110545068_110545207_110545472_110545632_110546553_110546678_110546844_110547021_110547103_110547286_110549392_110549603_110551723_110551812_110557851_110558048_110562611_110562758_110563102_110563334_110567375_110567529_110567963_110568076_110569656_110569725_110610714
H1_mix_00054003	chr2	-	1999	10	FSM	ENSG00000169679.15	ENST00000465029.5	1999	10	0	0	0	0	multi-exon	FALSE	canonical	2	632	junction_3	148.471304955071	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTGTCATTTTTTTCT	-1	True	NA	NA	False	TATAAA	-4	NA	110678063	110660867	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_110661842_110666262_110666415_110667520_110667706_110667796_110667850_110669452_110669554_110670524_110670569_110672660_110672858_110674085_110674225_110674305_110674366_110677969
H1_mix_00054005	chr2	-	713	1	FSM	ENSG00000172965.17	ENST00000605570.1	1103	1	503	-113	503	-88	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCTGATAAAGAACTAGAG	NA	False	NA	NA	False	AAGAAA	-42	NA	111208614	111207901	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_111207900_111208600
H1_mix_00054006	chr2	-	769	1	FSM	ENSG00000172965.17	ENST00000371162.4	2044	1	1021	254	1021	53	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGACCACCTGAGGTCAG	NA	False	NA	NA	False	NA	NA	NA	111238026	111237257	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_111237300_111238000
H1_mix_00054007	chr2	-	479	3	FSM	ENSG00000172965.17	ENST00000453478.2	969	3	0	490	0	-479	multi-exon	FALSE	canonical	0	0	junction_2	0.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTTTCTAAGTTTTCT	NA	False	NA	NA	False	AAGAAA	-28	NA	111495097	111344060	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_111344238_111367486_111367576_111494884
H1_mix_00054008	chr2	-	1566	7	FSM	ENSG00000153107.13	ENST00000485325.1	2369	7	0	803	0	-803	multi-exon	FALSE	canonical	3	530	junction_2	28.9851494543135	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTTTGTTCTTTCAAG	NA	False	NA	NA	False	NA	NA	NA	111821756	111803335	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_111803531_111803704_111803840_111805801_111805894_111808946_111809182_111815369_111815642_111818839_111818959_111821238
H1_mix_00054009	chr2	-	602	1	FSM	ENSG00000225496.1	ENST00000427559.1	735	1	197	-64	197	64	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCGGCATGTTTGGAAATC	NA	False	NA	NA	False	NA	NA	NA	111940839	111940237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_111940200_111940800
H1_mix_00054013	chr2	-	1984	1	FSM	ENSG00000279267.1	ENST00000623707.1	2042	1	38	20	38	-20	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAACTGTAAATATTAAG	NA	False	NA	NA	False	NA	NA	NA	113607870	113605886	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_113605900_113607900
H1_mix_00054014	chr2	-	2078	3	FSM	ENSG00000240356.6	ENST00000416673.6	2078	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	28	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGGTTAACTTTAGGCAT	NA	False	NA	NA	False	CATAAA	-6	NA	113627040	113610501	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_113612248_113625608_113625730_113626829
H1_mix_00054015	chr2	-	738	3	FSM	ENSG00000240356.6	ENST00000391616.3	738	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	12	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATAAGCTTTAAGATTTT	NA	False	NA	NA	False	CATAAA	-45	NA	113627090	113611683	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_113612248_113625608_113625730_113627037
H1_mix_00054016	chr2	-	2499	17	NIC	ENSG00000115084.15	novel	3120	17	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_1	21.7944051019981	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTATTGTAGATGTAT	0	True	NA	1	True	ATTAAA	-21	NA	113756587	113714352	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_113715042_113715157_113715196_113717752_113717851_113719153_113719309_113723103_113723195_113725377_113725538_113729400_113729506_113731583_113731649_113734585_113734674_113735776_113735859_113742691_113742880_113743712_113743795_113746276_113746340_113750424_113750569_113755164_113755307_113755453_113755545_113756369
H1_mix_00054017	chr2	-	2644	16	NIC	ENSG00000115084.15	novel	10314	16	NA	NA	0	-2	intron_retention	FALSE	canonical	1	1	junction_2	22.2047042062913	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTGTATTGTAGATGT	-5	True	NA	-1	True	ATTAAA	-19	NA	113756620	113714354	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_113715196_113717752_113717849_113719153_113719309_113723103_113723195_113725377_113725538_113729400_113729506_113731583_113731649_113734585_113734674_113735776_113735859_113742691_113742880_113743712_113743795_113746276_113746340_113750424_113750569_113755164_113755307_113755453_113755545_113756369
H1_mix_00054019	chr2	-	283	1	FSM	ENSG00000270019.1	ENST00000602760.1	1548	1	-76	1341	-76	-1341	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCAGTCGGGGAACGGA	1632	False	NA	NA	False	NA	NA	NA	113889826	113889543	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_113889500_113889800
H1_mix_00054020	chr2	-	750	4	NNC	ENSG00000235026.7	novel	730	3	NA	NA	0	39088	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.9652400197707	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAAAGAAAGAAAGA	-7	True	NA	NA	False	AAAAAG	-5	NA	115161343	115087533	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_115087554_115144047_115144369_115144858_115145028_115161103
H1_mix_00054023	chr2	-	666	5	NIC	ENSG00000186132.15	novel	685	6	NA	NA	-26	6	combination_of_known_splicesites	FALSE	canonical	3	28	junction_3	39.6894192449323	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTGATTCTTAAATTAT	5464	False	NA	0	True	AATAAA	-23	NA	119366860	119302218	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_119302549_119311621_119311704_119317465_119317504_119339826_119339972_119366789
H1_mix_00054024	chr2	-	8668	37	NIC	ENSG00000074054.20	novel	8092	40	NA	NA	-35	0	intron_retention	FALSE	canonical	2	97	junction_12	112.912194116698	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTGCTTGATGATGTCT	1891	False	NA	-4	True	AATAAA	-16	NA	121649511	121337775	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_121340948_121347037_121347155_121348511_121348719_121363171_121363301_121365093_121365285_121367587_121367832_121377498_121377650_121387121_121387229_121387762_121387907_121397139_121397284_121398321_121398401_121401508_121401673_121401867_121402664_121404370_121404435_121407470_121407716_121410865_121410970_121425138_121425307_121430072_121430178_121447336_121447508_121448275_121448326_121448952_121449121_121450912_121450991_121451789_121451850_121457686_121457758_121458839_121458976_121459979_121460126_121461100_121461194_121462531_121462606_121469807_121469961_121503166_121503235_121515664_121515763_121525844_121525921_121527798_121527891_121528676_121528781_121530246_121530326_121605700_121606181_121649371
H1_mix_00054026	chr2	-	1329	3	FSM	ENSG00000155438.12	ENST00000498570.1	374	3	-8	-947	-8	161	multi-exon	FALSE	canonical	3	731	junction_1	16.5	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTATTTTGGGAGGCCGA	8318	False	NA	NA	False	AATGAA	-30	NA	121728607	121726783	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_121727913_121728287_121728357_121728476
H1_mix_00054030	chr2	-	905	1	FSM	ENSG00000260634.1	ENST00000567613.1	1472	1	29	538	29	-538	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCATCGAGGCCCACCCT	5479	False	NA	NA	False	TTTAAA	-18	NA	127025694	127024789	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127024800_127025700
H1_mix_00054031	chr2	-	5149	5	FSM	ENSG00000136717.15	ENST00000462958.5	5141	5	0	-8	0	2	multi-exon	FALSE	canonical	3	9	junction_4	89.119302061899	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTATTTGTTCTCCCT	8390	False	NA	-7	True	GATAAA	-16	NA	127056491	127048024	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127048634_127050420_127050523_127050801_127050913_127051153_127051244_127052254
H1_mix_00054032	chr2	-	2454	18	NIC	ENSG00000136717.15	novel	2487	19	NA	NA	12	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	82.8372314869058	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTGTGTGTATTTGTTCT	145	False	NA	-11	True	GATAAA	-12	NA	127107142	127048028	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_127048634_127050420_127050523_127050801_127050913_127051153_127051244_127052254_127052363_127053904_127054013_127057472_127057602_127059010_127059156_127062114_127062198_127063570_127063647_127063932_127064019_127068162_127068256_127068923_127069032_127069994_127070091_127070552_127070648_127070761_127070817_127076625_127076707_127106859
H1_mix_00054033	chr2	-	3397	10	FSM	ENSG00000163161.14	ENST00000646042.1	3390	10	0	-7	0	7	multi-exon	FALSE	canonical	3	253	junction_9	34.5928701709856	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACAAGTGTTTTTATGCTT	5072	False	NA	-2	True	AATAAA	-30	NA	127290893	127257282	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127257728_127259295_127259449_127261227_127261347_127271335_127271454_127272864_127272962_127279172_127279376_127280446_127280632_127286702_127287018_127288659_127288865_127289336
H1_mix_00054034	chr2	-	2914	15	FSM	ENSG00000163161.14	ENST00000426778.5	2916	15	0	2	0	-2	multi-exon	FALSE	canonical	1	6	junction_14	94.551708129489	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTCATTGTACAAGTGTT	7	True	NA	-11	True	AATAAA	-21	NA	127294145	127257291	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127257728_127259295_127259449_127261227_127261347_127271335_127271454_127272864_127272962_127279172_127279376_127280446_127280632_127286702_127287018_127288659_127288865_127289336_127289502_127289688_127289825_127290223_127290274_127292609_127292847_127293512_127293719_127293856
H1_mix_00054040	chr2	-	1157	3	FSM	ENSG00000163166.15	ENST00000460511.5	598	3	-400	-159	-3	0	multi-exon	FALSE	canonical	3	24	junction_2	214.5	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGAGGAGCTTCCCAAA	NA	False	NA	NA	False	NA	NA	NA	127526889	127505190	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127505753_127523675_127523792_127526410
H1_mix_00054041	chr2	-	1136	2	FSM	ENSG00000072163.20	ENST00000494613.5	1137	2	0	1	0	-1	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACAGCAGCCTGCGTGGT	13	True	NA	-6	True	AATGAA	-15	NA	127640403	127638426	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127639429_127640269
H1_mix_00054043	chr2	-	7740	1	Genic_Genomic	ENSG00000136709.12	novel	NA	NA	NA	NA	67838	12	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCACCGAGCTTTGGGAT	5768	False	NA	42	True	AATAAA	-26	NA	127743115	127735375	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr2_-_127735400_127743100
H1_mix_00054047	chr2	-	4198	22	NNC	ENSG00000136715.19	novel	4173	21	NA	NA	0	34077	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	57.6375413059965	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGCTGAGCATGGCGGTGT	-1	True	NA	NA	False	ACTAAA	-40	NA	128027293	127907139	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_127907174_127941223_127942165_127942423_127942538_127945455_127945560_127949868_127949995_127950159_127950409_127954985_127955345_127977984_127978090_127986784_127986963_127989563_127989867_127993186_127993309_127996349_127996492_127999740_127999846_128000055_128000147_128000306_128000455_128010268_128010394_128013029_128013155_128014802_128014915_128016388_128016548_128017679_128017916_128026180_128026299_128027091
H1_mix_00054048	chr2	-	4116	22	NNC	ENSG00000136715.19	novel	4084	21	NA	NA	0	34077	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	49.7018776706769	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGCTGAGCATGGCGGTGT	-4	True	NA	NA	False	ACTAAA	-40	NA	128028059	127907139	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_127907174_127941223_127942165_127942423_127942538_127945455_127945560_127949868_127949995_127950159_127950409_127954985_127955345_127977984_127978090_127986784_127986963_127989563_127989867_127993186_127993309_127996349_127996492_127999740_127999846_128000055_128000147_128000306_128000455_128010268_128010394_128013029_128013155_128014802_128014915_128016388_128016548_128017679_128017916_128026180_128026299_128027939
H1_mix_00054049	chr2	-	4145	22	NNC	ENSG00000136715.19	novel	4140	21	NA	NA	29	34077	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	59.9050647278287	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGCTGAGCATGGCGGTGT	4	True	NA	NA	False	ACTAAA	-40	NA	128028091	127907139	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_127907174_127941223_127942165_127942423_127942538_127945455_127945560_127949868_127949995_127950159_127950409_127954985_127955345_127977984_127978090_127986784_127986963_127989563_127989867_127993186_127993309_127996349_127996492_127999740_127999846_128000055_128000147_128000306_128000452_128010268_128010394_128013029_128013155_128014802_128014915_128016388_128016548_128017679_128017916_128026180_128026299_128027939
H1_mix_00054050	chr2	-	4059	20	FSM	ENSG00000136715.19	ENST00000259235.7	4065	20	0	6	0	0	multi-exon	FALSE	canonical	2	50	junction_19	49.0701346680798	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGCGCAGTTTGCATCT	-1	True	NA	-9	True	AATAAA	-20	NA	128027293	127941223	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127942165_127942423_127942538_127945455_127945560_127949868_127949995_127950159_127950409_127954985_127955345_127986784_127986963_127989563_127989867_127993186_127993309_127996349_127996492_127999740_127999846_128000055_128000147_128000306_128000455_128010268_128010394_128013029_128013155_128014802_128014915_128016388_128016548_128017679_128017916_128026180_128026299_128027091
H1_mix_00054052	chr2	-	209	1	FSM	ENSG00000227653.1	ENST00000427740.1	390	1	9	172	9	-172	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGAAGAAGTTATTCAAG	NA	False	NA	NA	False	AATATA	-20	NA	128519168	128518959	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_128519000_128519200
H1_mix_00054053	chr2	-	1492	8	FSM	ENSG00000152076.19	ENST00000310463.10	1549	8	57	0	-1	0	multi-exon	FALSE	canonical	3	39	junction_6	11.141025490483	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	NA	False	NA	NA	False	AATAAA	-17	NA	130145077	130139286	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_130139691_130139890_130139948_130140022_130140097_130140178_130140372_130141157_130141297_130142132_130142382_130143268_130143314_130144746
H1_mix_00054054	chr2	-	3941	5	NIC	ENSG00000152076.19	novel	1549	8	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	51	junction_2	11.0989864402116	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTGTGCCTGGCTCCTC	12	False	NA	NA	False	AATAAA	-16	NA	130145018	130139287	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_130139691_130139890_130139948_130140022_130140097_130140178_130143314_130144746
H1_mix_00054055	chr2	-	1552	9	NNC	ENSG00000152076.19	novel	1549	8	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	28.572003342433	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTGTGCCTGGCTCCTC	-1	False	NA	NA	False	AATAAA	-16	NA	130145031	130139287	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_130139691_130139890_130139948_130140022_130140097_130140178_130140372_130141157_130141297_130142132_130142354_130143268_130143314_130144339_130144475_130144746
H1_mix_00054056	chr2	-	2569	7	FSM	ENSG00000136699.20	ENST00000491128.5	2570	7	0	1	0	-1	multi-exon	FALSE	canonical	3	627	junction_6	49.958037947417	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTTCTGGCACCTGGGC	8844	False	NA	NA	False	AATAAA	-16	NA	130156263	130151409	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_130152885_130153042_130153172_130153318_130153451_130153701_130153936_130154276_130154483_130155095_130155260_130156034
H1_mix_00054057	chr2	-	4297	7	FSM	ENSG00000136699.20	ENST00000482171.5	4298	7	0	1	0	-1	multi-exon	FALSE	canonical	3	627	junction_5	58.0155630460961	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTTCTGGCACCTGGGC	7154	False	NA	NA	False	AATAAA	-16	NA	130157953	130151409	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_130152885_130153042_130153172_130153318_130153451_130153701_130153936_130154276_130155260_130156034_130156676_130157250
H1_mix_00054058	chr2	-	3614	17	FSM	ENSG00000136699.20	ENST00000431183.6	3614	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_14	192.917080633105	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGTCTCTAGGAGGTTC	2136	False	NA	NA	False	AATAAA	-34	NA	130181757	130151391	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_130152885_130153042_130153172_130153318_130153451_130153701_130153936_130154276_130154483_130155095_130155260_130156034_130156136_130156584_130156676_130157250_130157397_130164373_130164446_130167457_130167591_130172348_130172501_130172624_130172678_130172786_130172896_130174913_130175001_130176553_130176638_130181529
H1_mix_00054062	chr2	-	1847	6	FSM	ENSG00000136710.10	ENST00000442217.5	1847	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	141.203965949969	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTGTGTTTTTTGATC	339	False	NA	-2	True	AGTAAA	-21	NA	130342349	130338242	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_130339233_130339559_130339763_130340907_130341040_130341666_130341750_130341840_130341945_130342014
H1_mix_00054063	chr2	-	2078	6	FSM	ENSG00000136710.10	ENST00000651709.1	2063	6	0	-15	0	0	multi-exon	FALSE	canonical	3	19	junction_2	143.65737015552	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTGTGTTTTTTGATC	-11	True	NA	-2	True	AGTAAA	-21	NA	130342699	130338242	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_130339233_130339559_130339763_130340907_130341040_130341666_130341750_130341840_130341945_130342133
H1_mix_00054064	chr2	-	2868	4	NNC	ENSG00000178162.8	novel	2070	4	NA	NA	0	7086	intron_retention	FALSE	non_canonical	0	0	junction_1	64.380811496042	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTTATAAAATAGTTTTA	NA	False	NA	NA	False	NA	NA	NA	130427986	130409668	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_130409696_130416755_130419246_130425090_130425159_130427703
H1_mix_00054066	chr2	-	410	3	FSM	ENSG00000178162.8	ENST00000449066.5	409	3	0	-1	0	0	multi-exon	FALSE	canonical	2	6	junction_1	75	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGAGTGGTCGTTGT	NA	False	NA	NA	False	AATAAA	-14	NA	130425138	130416754	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_130416942_130419070_130419246_130425090
H1_mix_00054069	chr2	-	1194	1	FSM	ENSG00000217950.4	ENST00000407594.2	1944	1	31	719	31	-719	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTCAACCTGCAGGAGAAG	NA	False	NA	NA	False	NA	NA	NA	131444556	131443362	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_131443400_131444600
H1_mix_00054070	chr2	-	980	4	FSM	ENSG00000173272.16	ENST00000445782.2	980	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	698.154392348537	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGGGGAGGAAGCTATTTA	7	True	NA	-86	True	NA	NA	NA	131492387	131469808	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_131470344_131472067_131472183_131491875_131492025_131492206
H1_mix_00054071	chr2	-	1403	1	FSM	ENSG00000213222.3	ENST00000448659.1	1027	1	-179	-197	-179	197	mono-exon	FALSE	NA	NA	NA	NA	NA	190	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGCCAGATTGAGGGGCA	NA	False	NA	NA	False	NA	NA	NA	131724458	131723055	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_131723100_131724500
H1_mix_00054072	chr2	-	1160	1	FSM	ENSG00000272769.1	ENST00000608279.1	1682	1	218	304	218	-304	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCATGCATTTGGGGCTAA	192	False	NA	NA	False	NA	NA	NA	132347079	132345919	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_132345900_132347100
H1_mix_00054073	chr2	-	1885	8	FSM	ENSG00000152128.13	ENST00000281924.6	1892	8	0	7	0	-2	multi-exon	FALSE	canonical	0	0	junction_6	4.9528388066742	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGCATGGGAAGGCAATC	-6	True	NA	-16	True	AATAAA	-18	NA	134719000	134455765	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_134456777_134458031_134458174_134466113_134466226_134502900_134502998_134550569_134550662_134552047_134552092_134713199_134713320_134718733
H1_mix_00054074	chr2	-	6714	21	FSM	ENSG00000121988.18	ENST00000264159.11	6712	21	6	-8	6	8	multi-exon	FALSE	canonical	3	22	junction_9	12.5078975051765	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCCTAGCAGTTTCTCT	-15	True	NA	9	True	ATTAAA	-30	NA	135531212	135196960	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_135200441_135202831_135202964_135207433_135207837_135208867_135208979_135217464_135217608_135219076_135219179_135224425_135224518_135227811_135228016_135230512_135230928_135265533_135265687_135268961_135269142_135271767_135271888_135275635_135275756_135313488_135313606_135315358_135315531_135345549_135345636_135349983_135350216_135353449_135353629_135390801_135390821_135504328_135504497_135531126
H1_mix_00054075	chr2	-	3504	20	ISM	ENSG00000121988.18	ENST00000264159.11	6712	21	25	5574	6	-105	5prime_fragment	FALSE	canonical	3	22	junction_8	12.7561836615286	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAAGTTTGGTGAATTGG	4	True	NA	NA	False	AATACA	-38	NA	135531193	135202542	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_135202964_135207433_135207837_135208867_135208979_135217464_135217608_135219076_135219179_135224425_135224518_135227811_135228016_135230512_135230928_135265533_135265687_135268961_135269142_135271767_135271888_135275635_135275756_135313488_135313606_135315358_135315531_135345549_135345636_135349983_135350216_135353449_135353629_135390801_135390821_135504328_135504497_135531126
H1_mix_00054076	chr2	-	1071	7	NIC	ENSG00000121988.18	novel	823	4	NA	NA	27	15	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	16.2138486760204	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCCTTTGTTTTTATTT	25	True	NA	-3	True	AATAAA	-24	NA	135531172	135345120	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_135345462_135345549_135345636_135349983_135350216_135353449_135353629_135390801_135390821_135504328_135504497_135531126
H1_mix_00054077	chr2	-	503	4	FSM	ENSG00000121988.18	ENST00000492193.1	546	4	0	43	0	-43	multi-exon	FALSE	canonical	3	14	junction_3	20.0720922897661	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAGATAATAATTTAGAAG	-5	True	NA	NA	False	NA	NA	NA	135530576	135353363	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_135353629_135390801_135390821_135504328_135504497_135530525
H1_mix_00054078	chr2	-	1398	1	FSM	ENSG00000235651.1	ENST00000413279.1	1398	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTCATGGATCTTCACGC	NA	False	NA	NA	False	NA	NA	NA	135511943	135510545	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_135510500_135511900
H1_mix_00054081	chr2	-	207	1	FSM	ENSG00000121966.7	ENST00000409817.1	1895	1	-98	1786	-98	-1498	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTCTACCAAAGAAGGATAT	2938	False	NA	NA	False	NA	NA	NA	136116341	136116134	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_136116100_136116300
H1_mix_00054083	chr2	-	706	1	FSM	ENSG00000234645.3	ENST00000431545.1	765	1	4	55	4	-55	mono-exon	FALSE	NA	NA	NA	NA	NA	199	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGGTGAAGAGCAGAATA	NA	False	NA	NA	False	NA	NA	NA	138288789	138288083	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_138288100_138288800
H1_mix_00054085	chr2	-	2209	10	FSM	ENSG00000121964.15	ENST00000409298.5	2209	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	37.7519519567295	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAGCATATTCATTTACA	5369	False	NA	-7	True	AATAAA	-30	NA	144235737	143946015	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_143947136_143951981_143952074_143952772_143952844_143957194_143957340_143970652_143970763_144141881_144142056_144145571_144145740_144208602_144208805_144211514_144211580_144235675
H1_mix_00054086	chr2	-	2456	6	FSM	ENSG00000121964.15	ENST00000491448.5	2456	6	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	14.5958898324152	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCCTGTCTTCCTTTGTA	5369	False	NA	NA	False	AATAAA	-23	NA	144235737	144005750	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_144007536_144141881_144142056_144145571_144145740_144208602_144208805_144211514_144211580_144235675
H1_mix_00054092	chr2	-	5125	6	FSM	ENSG00000162980.17	ENST00000428992.2	747	6	-34	-4344	-10	38	multi-exon	FALSE	canonical	0	0	junction_5	233.882363593324	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGTCACAATTTGTGC	-17	True	NA	38	True	NA	NA	NA	151828502	151798758	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_151803325_151806820_151806973_151812356_151812441_151814168_151814317_151815138_151815200_151828388
H1_mix_00054093	chr2	-	1076	7	FSM	ENSG00000162980.17	ENST00000458140.6	1076	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	292.426438993163	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAATTTTAAGAGCTTT	-7	True	NA	NA	False	NA	NA	NA	151828492	151802981	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_151803325_151806820_151806973_151810377_151810562_151812356_151812441_151814168_151814317_151815138_151815200_151828388
H1_mix_00054100	chr2	-	691	1	FSM	ENSG00000230562.3	ENST00000464802.1	691	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CGTAACATTAAGAAAAATCA	NA	False	NA	NA	False	AAAAAG	-29	NA	157380414	157379723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_157379700_157380400
H1_mix_00054105	chr2	-	1923	11	FSM	ENSG00000196151.11	ENST00000409990.7	1920	11	0	-3	0	0	multi-exon	FALSE	canonical	3	4	junction_10	17.9913868281464	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAGTGTCCTAAGTTTTT	149	False	NA	-5	True	AATAAA	-14	NA	159286592	159235797	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_159236191_159248371_159248513_159256195_159256376_159257757_159257865_159257944_159257986_159259809_159259844_159271701_159271796_159275545_159275639_159279760_159279946_159282671_159283094_159286359
H1_mix_00054113	chr2	-	6932	35	FSM	ENSG00000054219.11	ENST00000263636.5	6932	35	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	3.96448332417752	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGGAGTTGATCCTTCT	-40	True	NA	NA	False	AATAAA	-30	NA	159904756	159803354	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_159805223_159806972_159807141_159808448_159808572_159810525_159810676_159815404_159815574_159816805_159817033_159819725_159819921_159831669_159831787_159834043_159834212_159835479_159835646_159840728_159840956_159842244_159842375_159849979_159850141_159850361_159850468_159852200_159852341_159853272_159853353_159853629_159853698_159854359_159854536_159854903_159854940_159858361_159858477_159860820_159860890_159864838_159864921_159872450_159872594_159875443_159875644_159878323_159878494_159878632_159878722_159879258_159879370_159881082_159881241_159882123_159882316_159885152_159885294_159886419_159886531_159890212_159890378_159893913_159894085_159898687_159899060_159904588
H1_mix_00054115	chr2	-	1402	2	FSM	ENSG00000054219.11	ENST00000492955.1	1402	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTACTTAGCCATTTTC	-33	True	NA	NA	False	ACTAAA	-22	NA	159904749	159902364	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_159903606_159904588
H1_mix_00054116	chr2	-	1684	8	ISM	ENSG00000153246.13	ENST00000392771.1	5160	27	-25	74291	-20	-74291	5prime_fragment	FALSE	canonical	2	5	junction_1	3.37457480314792	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTGATTCATTTGTTC	-9	True	NA	NA	False	AATAGA	-31	NA	160062635	160020105	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_160020264_160022664_160022860_160028217_160028362_160028849_160028964_160032958_160033133_160042024_160042199_160044773_160045158_160062294
H1_mix_00054123	chr2	-	6763	4	ISM	ENSG00000115290.10	ENST00000488342.5	1983	14	117962	10	-6378	0	intron_retention	FALSE	canonical	3	118	junction_2	12.2836838484589	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATGACTTGGTGTGTT	10	False	NA	-18	True	ATTAAA	-9	NA	164503430	164492821	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_164493183_164494430_164494525_164497007_164497096_164497210
H1_mix_00054124	chr2	-	431	3	FSM	ENSG00000082438.18	ENST00000496396.1	944	3	280	233	-10	-233	multi-exon	FALSE	canonical	2	2	junction_2	4	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACGCTGGAGTAAATGAAA	436	False	NA	NA	False	NA	NA	NA	164841860	164743686	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_164743876_164841155_164841247_164841709
H1_mix_00054126	chr2	-	603	3	FSM	ENSG00000115339.14	ENST00000463254.1	603	3	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	25.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTTTGGAATAAGAATAT	NA	False	NA	NA	False	NA	NA	NA	165762025	165758617	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_165758865_165759335_165759571_165761904
H1_mix_00054127	chr2	-	540	2	FSM	ENSG00000115339.14	ENST00000431484.1	540	2	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGGTGAGAGACCTTG	7	True	NA	NA	False	AAAACA	-3	NA	165794650	165770430	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_165770809_165794488
H1_mix_00054131	chr2	-	1942	3	FSM	ENSG00000169432.19	ENST00000646694.1	2717	3	775	0	775	0	multi-exon	FALSE	canonical	2	3	junction_2	2	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTATTATTTATCTATTA	NA	False	NA	NA	False	AATAAA	-20	NA	166204464	166198298	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_166199865_166203954_166204226_166204359
H1_mix_00054132	chr2	-	878	2	FSM	ENSG00000169432.19	ENST00000645283.1	1097	2	36	183	36	-183	multi-exon	FALSE	canonical	3	13	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATAGCCATGTGTAAGAC	NA	False	NA	NA	False	AATGAA	-43	NA	166278277	166276599	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_166277340_166278139
H1_mix_00054133	chr2	-	621	3	ISM	ENSG00000169432.19	ENST00000472119.2	2283	7	73	4931	16	-484	5prime_fragment	FALSE	canonical	2	7	junction_1	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCTAAGAAGAATATCTAT	57	False	NA	NA	False	NA	NA	NA	166375928	166306993	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_166307075_166311498_166311807_166375696
H1_mix_00054135	chr2	-	3503	18	NNC	ENSG00000198648.11	novel	3272	18	NA	NA	-315	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	84	junction_5	54.8109680130982	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTTTTGCATTGTTTCT	NA	False	NA	-2	True	AATAAA	-18	NA	168247910	167954021	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_167955571_167964661_167964727_168012633_168012703_168017042_168017096_168063499_168063571_168074981_168075012_168075108_168075232_168129540_168129607_168129709_168129759_168138087_168138222_168140288_168140391_168140648_168140759_168161786_168161843_168163738_168163881_168167298_168167408_168181977_168182091_168247227_168247362_168247382
H1_mix_00054136	chr2	-	503	5	FSM	ENSG00000081479.15	ENST00000491228.1	556	5	53	0	53	0	multi-exon	FALSE	canonical	3	5	junction_3	1.11803398874989	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCACCAGCTGCTGATGGA	NA	False	NA	NA	False	CATAAA	-33	NA	169139610	169132599	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_169132682_169137391_169137494_169138576_169138707_169139250_169139372_169139542
H1_mix_00054142	chr2	-	1370	7	FSM	ENSG00000138382.15	ENST00000410097.5	1370	7	0	0	0	0	multi-exon	FALSE	canonical	3	727	junction_6	233.218781404929	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGCAAACAAAAGTCGTTTAA	24	True	NA	-25	True	TTTAAA	-6	NA	169824874	169811813	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_169812507_169815476_169815529_169819560_169819644_169821091_169821274_169821942_169822058_169824488_169824641_169824781
H1_mix_00054143	chr2	-	527	3	FSM	ENSG00000234350.6	ENST00000624287.1	594	3	67	0	2	0	multi-exon	FALSE	canonical	2	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATTTCTGCAGCACAGAA	NA	False	NA	NA	False	AAAACA	-44	NA	170727788	170725736	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_170726090_170727284_170727329_170727658
H1_mix_00054144	chr2	-	4099	2	NNC	ENSG00000198586.14	novel	5723	21	NA	NA	60251	891	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAATCTTCATTTGTCTA	NA	False	NA	NA	False	NA	NA	NA	170994878	170989931	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_170993691_170994538
H1_mix_00054148	chr2	-	697	4	FSM	ENSG00000123600.21	ENST00000463392.5	697	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	46.8852025933793	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAATTAAGTTAGTATTAT	NA	False	NA	7	True	NA	NA	NA	171327065	171323900	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_171324363_171325840_171325907_171326041_171326149_171327003
H1_mix_00054152	chr2	-	535	2	Genic_Genomic	ENSG00000233762.3	novel	447	1	NA	NA	-22	27626	multi-exon	TRUE	non_canonical	0	0	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAATTATGCTTCATCTT	-2	True	NA	NA	False	NA	NA	NA	171517738	171489643	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr2_-_171489662_171517221
H1_mix_00054153	chr2	-	549	2	ISM	ENSG00000115840.14	ENST00000472070.1	1889	3	972	495	972	-495	intron_retention	FALSE	canonical	3	50	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTAGTGTTGCTGTGGTT	NA	False	NA	NA	False	AAAACA	-31	NA	171787970	171785326	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_171785476_171787570
H1_mix_00054154	chr2	-	5850	7	NNC	ENSG00000172845.18	novel	11714	7	NA	NA	0	73388	intron_retention	FALSE	non_canonical	0	0	junction_1	145.972600168662	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGGGTCCTCACCAGA	1303	False	NA	NA	False	NA	NA	NA	173964553	173807461	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_173807494_173906461_173910258_173913069_173913267_173918592_173918786_173954872_173956233_173963760_173963884_173964404
H1_mix_00054155	chr2	-	3627	5	FSM	ENSG00000172845.18	ENST00000416195.1	3627	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	150.882404540755	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTGTATTCCTATGCA	1303	False	NA	0	True	AATAAA	-23	NA	173964553	173908529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_173910258_173913069_173913267_173918592_173918786_173954872_173956233_173964404
H1_mix_00054156	chr2	-	2568	4	NIC	ENSG00000172845.18	novel	3937	5	NA	NA	0	-7	combination_of_known_splicesites	FALSE	canonical	2	6	junction_3	165.920328939993	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGAGTTTGTTGTAT	-15	True	NA	-9	True	AATAAA	-14	NA	173964219	173908538	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_173910258_173913069_173913267_173918592_173918786_173963760
H1_mix_00054157	chr2	-	1791	12	NNC	ENSG00000138430.16	novel	4251	11	NA	NA	0	4175	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	257.622473481983	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAATAAAGTACATCTTAT	-10	True	NA	NA	False	NA	NA	NA	174248599	174068271	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_174068305_174075006_174075528_174078967_174079091_174081151_174081249_174081923_174082065_174123179_174123278_174123594_174123676_174141824_174142001_174223032_174223161_174229307_174229452_174246714_174246816_174248451
H1_mix_00054158	chr2	-	1748	11	NNC	ENSG00000138430.16	novel	1656	10	NA	NA	-58	4175	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	343.481644342169	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAATAAAGTACATCTTAT	NA	False	NA	NA	False	NA	NA	NA	174248657	174068271	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_174068305_174075006_174075528_174078967_174079091_174081151_174081249_174081923_174082065_174123179_174123278_174123594_174123676_174141824_174142001_174223032_174223161_174229307_174229452_174248451
H1_mix_00054159	chr2	-	1716	5	FSM	ENSG00000115935.18	ENST00000409415.7	1772	5	0	56	0	-56	multi-exon	FALSE	canonical	3	32	junction_4	5.71729831301464	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGCCAGGCTTTGAGGCCA	20	True	NA	-57	True	AATGAA	-24	NA	174682871	174571224	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_174572447_174575203_174575381_174581309_174581440_174585522_174585612_174682773
H1_mix_00054160	chr2	-	2257	8	FSM	ENSG00000128656.15	ENST00000652036.1	2257	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	139.948386987518	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAAATACTGAGTACTTC	10	True	NA	18	True	NA	NA	NA	174847555	174799338	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_174800288_174801706_174801813_174808904_174809043_174811510_174811589_174812308_174812483_174821728_174821780_174824433_174824519_174846879
H1_mix_00054162	chr2	-	2136	13	NIC	ENSG00000128656.15	novel	3156	13	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	3	14	junction_12	92.453441736308	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCATTTTCTGTTAAATT	20	True	NA	-20	True	AATAAA	-31	NA	175005361	174799496	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_174800288_174801706_174801813_174808904_174809043_174811510_174811589_174812308_174812483_174824433_174824519_174846879_174846958_174877839_174878129_174915057_174915172_174918533_174918566_174944887_174944944_174952163_174952203_175005205
H1_mix_00054163	chr2	-	1761	13	FSM	ENSG00000128656.15	ENST00000409156.7	1761	13	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_6	89.0462972590975	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTTTCTGTTGTTTTTGT	12	True	NA	-12	True	ATTAAA	-7	NA	175005369	174799988	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_174800288_174801706_174801813_174808904_174809043_174811510_174811589_174812308_174812483_174824433_174824519_174877839_174878129_174915057_174915172_174918533_174918566_174944887_174944944_174952163_174952203_175004893_175005081_175005205
H1_mix_00054172	chr2	-	384	2	FSM	ENSG00000224189.8	ENST00000547207.2	454	2	70	0	70	0	multi-exon	FALSE	canonical	2	7	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTACTTCTTTGTTATTC	602	False	NA	NA	False	AATGAA	-1	NA	176177498	176176475	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_176176693_176177331
H1_mix_00054173	chr2	-	3208	1	FSM	ENSG00000280374.1	ENST00000624891.1	757	1	-2454	3	-2454	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAGTTTTAGCTATTTAT	NA	False	NA	-4	True	AATAAA	-16	NA	177320925	177317717	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_177317700_177320900
H1_mix_00054174	chr2	-	1734	9	NNC	ENSG00000180228.14	novel	1616	9	NA	NA	0	281	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	292.240483164123	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGTTAGTAGAATTACCCAA	35	True	NA	NA	False	NA	NA	NA	178451113	178431010	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_178431040_178431416_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178447504_178447587_178450241_178450412_178450965
H1_mix_00054177	chr2	-	1713	9	FSM	ENSG00000180228.14	ENST00000676832.1	1713	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_6	382.676674883641	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	-5	True	NA	-51	True	AATAAA	-12	NA	178451153	178431434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178445425_178445536_178447504_178447587_178450365_178450412_178450965
H1_mix_00054178	chr2	-	1801	8	FSM	ENSG00000180228.14	ENST00000676922.1	1780	8	0	-21	0	0	multi-exon	FALSE	canonical	3	38	junction_5	295.382906114233	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTAATGGGTTACTTCCT	-9	True	NA	-30	True	AATAAA	-33	NA	178451157	178431413	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178447455_178447587_178450241_178450412_178450965
H1_mix_00054183	chr2	-	544	2	FSM	ENSG00000079150.19	ENST00000685403.1	2545	2	-13	2014	6	-8	multi-exon	FALSE	canonical	3	13	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTGTATTTGCTATTT	-13	True	NA	-114	True	TATAAA	-17	NA	178478589	178465698	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_178465932_178478278
H1_mix_00054184	chr2	-	632	3	FSM	ENSG00000079150.19	ENST00000419184.1	638	3	6	0	6	0	multi-exon	FALSE	canonical	3	19	junction_2	31.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGCTATTTACTGTACTT	-13	True	NA	NA	False	NA	NA	NA	178478589	178465744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_178465932_178469651_178469786_178478278
H1_mix_00054185	chr2	-	9782	9	ISM	ENSG00000155657.29	ENST00000342175.11	81357	191	266653	-1023	113527	0	3prime_fragment	FALSE	canonical	3	4	junction_8	20.8022685061029	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGCTGGTTGTTTTCT	10004	False	NA	-3	True	AATAAA	-23	NA	178537989	178525988	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_178527308_178527445_178527749_178528273_178528428_178528527_178529220_178529959_178530117_178530240_178535850_178535981_178536576_178536937_178537244_178537341
H1_mix_00054187	chr2	-	519	5	FSM	ENSG00000155657.29	ENST00000448510.2	519	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	1.11803398874989	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGAAAAAGCCTGAAGTT	9309	False	NA	NA	False	AAAAAG	-13	NA	178672418	178669624	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_178669676_178670217_178670296_178671089_178671171_178671970_178672268_178672406
H1_mix_00054190	chr2	-	722	5	FSM	ENSG00000187231.14	ENST00000426988.1	724	5	2	0	2	0	multi-exon	FALSE	canonical	1	2	junction_1	48.6569625028115	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATATGCAGCTTAGAAAAC	NA	False	NA	NA	False	AATAAA	-33	NA	179146457	179121793	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_179121930_179124363_179124559_179132303_179132427_179143591_179143804_179146401
H1_mix_00054191	chr2	-	434	3	FSM	ENSG00000187231.14	ENST00000489901.1	652	3	2	216	2	-216	multi-exon	FALSE	canonical	3	94	junction_2	5.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGGTAATTAGTAGCATAT	NA	False	NA	NA	False	NA	NA	NA	179146457	179132260	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_179132427_179143591_179143804_179146401
H1_mix_00054192	chr2	-	523	6	FSM	ENSG00000187231.14	ENST00000435047.5	681	6	167	-9	167	0	multi-exon	FALSE	canonical	0	0	junction_5	40.4445299144396	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGTCTCACCTATGATCA	1130	False	NA	NA	False	NA	NA	NA	179264036	179151322	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_179151392_179172119_179172234_179176447_179176539_179183079_179183189_179191786_179191867_179263976
H1_mix_00054194	chr2	-	3124	20	FSM	ENSG00000163510.14	ENST00000410053.8	3524	20	400	0	216	0	multi-exon	TRUE	canonical	1	3	junction_19	75.3715818214026	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTCAGTGATGTTTTTT	381	False	NA	-8	True	AATAAA	-16	NA	180006897	179944875	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_179945716_179950511_179950733_179950824_179950927_179952470_179952599_179954204_179954358_179954956_179955035_179959021_179959083_179964546_179964629_179965877_179965983_179970500_179970564_179970649_179970857_179970940_179971077_179973192_179973247_179973633_179973803_179978189_179978319_179981751_179981998_179986694_179986806_179988576_179988645_179993314_179993455_180006866
H1_mix_00054195	chr2	-	970	2	FSM	ENSG00000061676.15	ENST00000492058.1	642	2	-579	251	-579	-251	multi-exon	FALSE	canonical	3	688	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGTTTAGAGTGGTTAG	NA	False	NA	NA	False	AATAAA	-20	NA	182936082	182934652	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_182934833_182935292
H1_mix_00054196	chr2	-	665	3	FSM	ENSG00000061676.15	ENST00000495619.1	665	3	0	0	0	0	multi-exon	FALSE	canonical	3	684	junction_2	22.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGATAGTGGAGACTTTAT	9493	False	NA	NA	False	TTTAAA	-2	NA	182964764	182957140	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_182957597_182962158_182962279_182964675
H1_mix_00054197	chr2	-	488	1	FSM	ENSG00000177855.8	ENST00000453625.1	678	1	149	41	149	-41	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGGTGAAATCAAGAGAGAA	160	False	NA	NA	False	AATAAA	-4	NA	183607970	183607482	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_183607500_183608000
H1_mix_00054198	chr2	-	6143	15	FSM	ENSG00000064989.13	ENST00000392370.8	6112	15	-30	-1	-29	1	multi-exon	FALSE	canonical	2	7	junction_12	4.72779449810655	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTTTGCAAGTTTTTGT	4	True	NA	-15	True	TATAAA	-17	NA	187448282	187341962	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_187346400_187351919_187351962_187352113_187352333_187359062_187359130_187359211_187359273_187360597_187360752_187363375_187363503_187378939_187379032_187380466_187380580_187380676_187380788_187383172_187383306_187385544_187385632_187387328_187387494_187387665_187387757_187448038
H1_mix_00054201	chr2	-	1911	9	FSM	ENSG00000128694.12	ENST00000264151.10	1910	9	0	-1	0	1	multi-exon	FALSE	canonical	3	32	junction_1	26.6493433314969	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGGAATCCTTTCATTCT	-14	True	NA	-6	True	AATAAA	-19	NA	189762792	189746658	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_189747169_189750549_189750657_189752652_189752725_189752848_189752980_189753915_189754065_189754140_189754346_189755172_189755561_189761419_189761661_189762684
H1_mix_00054202	chr2	-	1369	6	FSM	ENSG00000128694.12	ENST00000524043.1	1388	6	3	16	3	-16	multi-exon	FALSE	canonical	3	98	junction_1	6.14491659829489	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGTATTAAGGTTAAAATT	1566	False	NA	NA	False	ATTAAA	-42	NA	189761660	189750549	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_189750657_189752652_189752725_189752848_189752980_189753915_189754346_189755172_189755561_189761419
H1_mix_00054205	chr2	-	598	1	FSM	ENSG00000273240.1	ENST00000608680.1	598	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGTAATTATTTACTTA	NA	False	NA	NA	False	AATAAA	-15	NA	189764456	189763858	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_189763900_189764500
H1_mix_00054206	chr2	-	893	3	FSM	ENSG00000128699.14	ENST00000442547.5	893	3	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_2	488.5	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGGCAGAAATTTTTA	1020	False	NA	NA	False	NA	NA	NA	189783573	189775564	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_189775717_189782421_189782603_189783013
H1_mix_00054207	chr2	-	914	3	FSM	ENSG00000128699.14	ENST00000458355.1	914	3	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_2	539	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGGCAGAAATTTTTA	-2	True	NA	NA	False	NA	NA	NA	189784328	189775564	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_189775717_189782421_189783124_189784268
H1_mix_00054209	chr2	-	679	1	FSM	ENSG00000272979.1	ENST00000609166.1	430	1	-278	29	-278	-29	mono-exon	FALSE	NA	NA	NA	NA	NA	1006	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTAACAATAAAAATATTTG	5239	False	NA	NA	False	AATAAA	-22	NA	190454799	190454120	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_190454100_190454800
H1_mix_00054212	chr2	-	8942	28	FSM	ENSG00000197121.15	ENST00000423035.5	8942	28	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_26	17.9265380979034	274	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTAACATTAATATGTTG	350	False	NA	NA	False	TATAAA	-20	NA	196926655	196835183	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_196841373_196842720_196842826_196843887_196844076_196844523_196844575_196845881_196846018_196847002_196847201_196847946_196848038_196864986_196865081_196870940_196870980_196872440_196872550_196872959_196873027_196873527_196873580_196873684_196873759_196875745_196875822_196880075_196880154_196885423_196885476_196885833_196885881_196890827_196890912_196892345_196892402_196893139_196893246_196897130_196897198_196898316_196898370_196902584_196902743_196912881_196913054_196916417_196916594_196919996_196920151_196922102_196922187_196926469
H1_mix_00054216	chr2	-	397	2	FSM	ENSG00000115524.17	ENST00000468925.1	510	2	113	0	113	0	multi-exon	FALSE	canonical	3	1861	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGATTAAGCTTGCATT	NA	False	NA	NA	False	TTTAAA	-10	NA	197408581	197407935	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_197408120_197408368
H1_mix_00054217	chr2	-	625	2	FSM	ENSG00000115524.17	ENST00000482158.1	772	2	0	147	0	-147	multi-exon	FALSE	canonical	3	1661	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATTTCTTTTTGTTTTTT	4947	False	NA	NA	False	NA	NA	NA	197418962	197416740	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_197416912_197418508
H1_mix_00054218	chr2	-	651	5	FSM	ENSG00000115524.17	ENST00000414963.2	651	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	901.534629118594	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTAGATGTTTGTGTT	NA	False	NA	-7	True	ATTAAA	-15	NA	197435079	197418795	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_197418952_197420427_197420543_197421028_197421134_197423807_197423975_197434971
H1_mix_00054219	chr2	-	2256	13	NNC	ENSG00000144381.18	novel	2245	12	NA	NA	0	55487	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2573.48516796235	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCACAGGAGGGGAAATCAG	3278	False	NA	NA	False	AAAAAG	-8	NA	197499817	197431096	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_197431131_197486583_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197499781
H1_mix_00054220	chr2	-	2303	13	NNC	ENSG00000144381.18	novel	2449	13	NA	NA	0	55487	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2573.48516796235	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCACAGGAGGGGAAATCAG	-2	True	NA	NA	False	AAAAAG	-8	NA	197499866	197431096	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_197431132_197486586_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197499781
H1_mix_00054221	chr2	-	2304	13	NNC	ENSG00000144381.18	novel	2449	13	NA	NA	0	55487	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2573.48516796235	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCACAGGAGGGGAAATCAG	-2	True	NA	NA	False	AAAAAG	-8	NA	197499866	197431096	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_197431131_197486584_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197499781
H1_mix_00054222	chr2	-	2262	13	NNC	ENSG00000144381.18	novel	2510	13	NA	NA	0	34533	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2573.48516796235	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACTTTCAGGTGTATGG	3278	False	NA	NA	False	AAAAAG	-16	NA	197499817	197452050	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_197452092_197486584_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197499781
H1_mix_00054223	chr2	-	2325	13	NNC	ENSG00000144381.18	novel	2245	12	NA	NA	0	34533	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2573.48516796235	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACTTTCAGGTGTATGG	3216	False	NA	NA	False	AAAAAG	-16	NA	197499879	197452050	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_197452092_197486583_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197499781
H1_mix_00054224	chr2	-	2450	13	FSM	ENSG00000144381.18	ENST00000428204.6	2449	13	0	-1	0	-1	multi-exon	TRUE	canonical	0	0	junction_12	3159.53290324166	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTGTGTTAGCATTTCC	-2	True	NA	NA	False	AATAAA	-17	NA	197499866	197486584	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197499258_197499439_197499781
H1_mix_00054227	chr2	-	662	2	FSM	ENSG00000119042.17	ENST00000483346.2	2647	2	236	1749	236	-1749	multi-exon	FALSE	canonical	3	11	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTATGGATCTCAGGACA	6254	False	NA	NA	False	TTTAAA	-3	NA	199368707	199348614	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_199349174_199368604
H1_mix_00054236	chr2	-	539	6	FSM	ENSG00000115942.9	ENST00000474877.1	551	6	12	0	12	0	multi-exon	FALSE	canonical	1	2	junction_5	100.324672937419	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGTTACAAGGAATGTTA	NA	False	NA	NA	False	NA	NA	NA	200943147	200933875	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_200933975_200935698_200935893_200937905_200937967_200941247_200941280_200942684_200942778_200943087
H1_mix_00054237	chr2	-	9498	13	FSM	ENSG00000155744.10	ENST00000681958.1	9503	13	0	5	0	-5	multi-exon	FALSE	canonical	2	5	junction_1	22.6205106043166	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGATTTCCCTGAGTTGAT	-22	True	NA	-5	True	TATAAA	-25	NA	201071671	200973722	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_200981872_200987364_200987533_200988261_200988422_200992280_200992369_200992886_200993004_200997444_200997541_201008972_201009089_201011391_201011473_201016990_201017171_201022830_201022933_201023958_201024040_201045495_201045594_201071609
H1_mix_00054241	chr2	-	558	7	FSM	ENSG00000155755.20	ENST00000489550.5	558	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	187.569024332081	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCACTGATGAGCAAACTA	745	False	NA	NA	False	NA	NA	NA	201643418	201632148	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_201632209_201633310_201633432_201634803_201634894_201636747_201636886_201638988_201639046_201640892_201640925_201643358
H1_mix_00054242	chr2	-	6210	35	FSM	ENSG00000003393.16	ENST00000679435.1	6250	35	0	40	0	6	multi-exon	TRUE	canonical	2	4	junction_1	33.7946295973099	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGTTGTTTTATGATTG	NA	False	NA	-1	True	AATAAA	-15	NA	201781158	201700553	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_201701139_201701541_201701890_201704121_201704219_201704453_201704604_201705138_201705201_201705415_201705462_201706845_201707023_201707868_201707992_201709880_201710039_201710990_201711109_201715671_201715840_201718076_201718211_201723042_201723121_201723329_201723442_201724294_201724460_201725355_201725455_201726483_201726550_201726663_201726867_201727211_201727279_201727704_201727776_201728511_201728641_201729051_201729184_201733275_201733439_201738669_201738736_201741673_201741855_201744257_201744430_201746565_201746749_201749711_201749790_201753145_201753243_201754502_201754672_201757401_201757760_201760880_201761819_201767228_201767384_201768865_201768946_201780876
H1_mix_00054243	chr2	-	6587	34	FSM	ENSG00000003393.16	ENST00000680726.1	6580	34	0	-7	0	0	multi-exon	FALSE	canonical	2	5	junction_3	33.9286508971224	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTATGTGGTTGTTTTA	NA	False	NA	-7	True	AATAAA	-9	NA	201781158	201700559	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_201701890_201704121_201704219_201704453_201704584_201705138_201705201_201705415_201705462_201706845_201707023_201707868_201707992_201709880_201710039_201710990_201711109_201715671_201715840_201718076_201718211_201723042_201723121_201723329_201723442_201724294_201724460_201725355_201725455_201726483_201726550_201726663_201726867_201727211_201727279_201727704_201727776_201728511_201728641_201729051_201729184_201733275_201733439_201738669_201738736_201741673_201741855_201744257_201744430_201746565_201746749_201749711_201749790_201753145_201753243_201754502_201754672_201757401_201757760_201760880_201761819_201767228_201767384_201768865_201768946_201780876
H1_mix_00054245	chr2	-	7033	33	FSM	ENSG00000003393.16	ENST00000681461.1	7027	33	0	-6	0	0	multi-exon	FALSE	canonical	3	104	junction_10	25.497223347602	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTATGTGGTTGTTTTA	NA	False	NA	-7	True	AATAAA	-9	NA	201781158	201700559	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_201701890_201704121_201704219_201704453_201704604_201705138_201705201_201705415_201705462_201706845_201707023_201707868_201707992_201709880_201710039_201710990_201711109_201715671_201715840_201718076_201718211_201723042_201723121_201723329_201723442_201724294_201724460_201725355_201725455_201726483_201726550_201726663_201726867_201727211_201727776_201728511_201728641_201729051_201729184_201733275_201733439_201738669_201738736_201741673_201741855_201744257_201744430_201746565_201746749_201749711_201749790_201753145_201753243_201754502_201754672_201757401_201757760_201760880_201761819_201767228_201767384_201768865_201768946_201780876
H1_mix_00054246	chr2	-	6619	35	FSM	ENSG00000003393.16	ENST00000680861.1	6751	35	137	-5	137	0	multi-exon	FALSE	canonical	0	0	junction_34	34.2586462705498	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTATGTGGTTGTTTTA	NA	False	NA	-7	True	AATAAA	-9	NA	201781975	201700559	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_201701890_201704121_201704219_201704453_201704604_201705138_201705201_201705415_201705462_201706845_201707023_201707868_201707992_201709880_201710039_201710990_201711109_201715671_201715840_201718076_201718211_201723042_201723121_201723329_201723442_201724294_201724460_201725355_201725455_201726483_201726550_201726663_201726867_201727211_201727279_201727704_201727776_201728511_201728641_201729051_201729184_201733275_201733439_201738669_201738736_201741673_201741855_201744257_201744430_201746565_201746749_201749711_201749790_201753145_201753243_201754502_201754672_201757401_201757760_201760880_201761819_201767228_201767384_201768865_201768946_201780876_201781080_201781884
H1_mix_00054248	chr2	-	534	5	FSM	ENSG00000116030.17	ENST00000409205.5	534	5	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_3	1958.0123212074	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTACGTGTGCACAGA	119	False	NA	NA	False	NA	NA	NA	202238462	202207030	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_202207322_202210734_202210807_202214356_202214430_202220031_202220107_202238439
H1_mix_00054249	chr2	-	5288	14	NNC	ENSG00000138442.11	novel	8068	13	NA	NA	0	276	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	173.526390742226	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGGCCAGGCTGTTCT	-13	True	NA	NA	False	GGGGCT	-35	NA	202911673	202873984	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_202875406_202878461_202880938_202882710_202882784_202883608_202883742_202884197_202884304_202884394_202884536_202892616_202892703_202894580_202894627_202896064_202896220_202897299_202897416_202899530_202899638_202901024_202901120_202907864_202907960_202911435
H1_mix_00054250	chr2	-	3140	14	NNC	ENSG00000138442.11	novel	8068	13	NA	NA	0	276	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	173.526390742226	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGGCCAGGCTGTTCT	-13	True	NA	NA	False	GGGGCT	-35	NA	202911673	202873984	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_202875406_202880609_202880938_202882710_202882784_202883608_202883742_202884197_202884304_202884394_202884536_202892616_202892703_202894580_202894627_202896064_202896220_202897299_202897416_202899530_202899638_202901024_202901120_202907864_202907960_202911435
H1_mix_00054251	chr2	-	482	2	FSM	ENSG00000138442.11	ENST00000467777.1	482	2	0	0	0	0	multi-exon	FALSE	canonical	3	712	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGTTTGAATTCAGATTT	NA	False	NA	-16	True	ATTAAA	-28	NA	202882855	202880600	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_202880938_202882710
H1_mix_00054255	chr2	-	5043	1	ISM	ENSG00000173166.18	ENST00000319170.10	9699	14	96449	128	56501	-128	mono-exon	FALSE	NA	NA	NA	NA	NA	339	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTTGAGTGTTTGTGGA	9218	False	NA	4	True	AATAAA	-30	NA	203438852	203433809	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_203433800_203438900
H1_mix_00054256	chr2	-	1779	13	FSM	ENSG00000173166.18	ENST00000419464.5	1779	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	5.63409758129512	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAATGTAAAGAATGTCC	NA	False	NA	NA	False	NA	NA	NA	203495353	203442077	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_203442081_203444867_203445011_203447958_203448080_203448737_203448837_203454429_203454541_203455436_203455581_203457529_203457596_203459906_203460029_203461248_203461409_203461847_203461926_203489583_203490090_203491213_203491320_203495233
H1_mix_00054257	chr2	-	2394	18	FSM	ENSG00000023228.14	ENST00000440274.5	2394	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	104.204018678027	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCATTGATAACCTTTGT	15	True	NA	-61	True	NA	NA	NA	206159425	206123955	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_206124277_206126538_206126612_206126709_206126845_206127796_206127973_206130087_206130243_206132944_206133106_206138484_206138615_206141940_206142070_206142685_206142832_206144017_206144133_206144891_206145027_206146902_206147089_206147530_206147662_206147752_206147835_206149019_206149097_206152418_206152511_206153617_206153683_206159340
H1_mix_00054258	chr2	-	569	6	FSM	ENSG00000023228.14	ENST00000454195.1	569	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	163.912903701936	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACCAGGGAGGTGAATGT	261	False	NA	NA	False	NA	NA	NA	206159257	206147781	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_206147835_206149019_206149097_206149817_206149926_206152418_206152511_206153617_206153683_206159083
H1_mix_00054259	chr2	-	1795	12	FSM	ENSG00000138400.13	ENST00000454776.6	1795	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	8.61768314629387	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTATTTTGGTGTCAAA	3	True	NA	NA	False	NA	NA	NA	206765286	206738256	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_206738512_206739592_206739659_206741053_206741105_206745621_206745674_206746286_206746427_206749019_206749184_206750933_206751076_206755008_206755506_206756897_206757041_206757236_206757372_206760900_206761014_206765249
H1_mix_00054260	chr2	-	1457	5	NNC	ENSG00000138400.13	novel	2334	12	NA	NA	717	2146	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	10.8483869768736	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTATCAATAGGATTATG	754	False	NA	NA	False	AATAAA	-18	NA	206764569	206754472	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_206755506_206756897_206757041_206757236_206757372_206760900_206761014_206764536
H1_mix_00054262	chr2	-	2606	2	Antisense	novelGene_ENSG00000229321.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	93	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCTGTTTGGTGGTCTC	6	True	NA	-2	True	AATAAA	-19	NA	206812282	206806878	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_-_206807239_206810036
H1_mix_00054263	chr2	-	1366	4	FSM	ENSG00000144401.14	ENST00000458426.5	1366	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	256.195671747636	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTAGTTGTATATAGTTG	6	True	NA	0	True	AATAAA	-24	NA	207625331	207581352	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_207582161_207621805_207621918_207624228_207624405_207625061
H1_mix_00054265	chr2	-	873	2	FSM	ENSG00000144401.14	ENST00000448823.2	869	2	0	-4	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTAAATGAGTAAGCTT	1015	False	NA	-6	True	AATAAA	-39	NA	207624380	207612722	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_207613444_207624228
H1_mix_00054267	chr2	-	1213	5	NIC	ENSG00000144401.14	novel	1103	4	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_2	265.65767446095	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGGGCCGGTATAAAGAA	NA	False	NA	-26	True	AATAAA	-19	NA	207625434	207612742	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_207613444_207620640_207620695_207621805_207621918_207624228_207624405_207625264
H1_mix_00054269	chr2	-	12222	3	NNC	ENSG00000163251.4	novel	7039	2	NA	NA	0	6489	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	252.5	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCATTCTTTTCAAAATAAA	-5	True	NA	NA	False	AATAAA	-16	NA	207769906	207756108	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_207760631_207761936_207768995_207769264
H1_mix_00054270	chr2	-	721	5	FSM	ENSG00000188674.11	ENST00000428015.5	748	5	0	27	0	-27	multi-exon	FALSE	canonical	1	1	junction_1	5.06828373317832	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTCTCATATGAAAAGAAT	7235	False	NA	7	True	AATAAA	-29	NA	208183024	208165402	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_208165816_208171987_208172076_208180744_208180817_208181217_208181306_208182964
H1_mix_00054272	chr2	-	2442	11	NNC	ENSG00000138413.14	novel	2318	10	NA	NA	-45	39793	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1615.91158173955	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATCAATATTCTGTGGAAG	NA	False	NA	NA	False	AAAAAG	-9	NA	208255158	208196435	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_208196473_208236228_208237170_208239070_208239234_208239862_208240004_208241993_208242146_208243426_208243605_208245318_208245425_208248368_208248661_208251429_208251568_208253885_208253960_208254938
H1_mix_00054273	chr2	-	2298	10	FSM	ENSG00000138413.14	ENST00000446179.5	2298	10	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_9	1679.94523720269	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTCTTCTGCGTTTCTGT	654	False	NA	-8	True	ATTAAA	-16	NA	208254458	208236231	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_208237170_208239070_208239234_208239862_208240004_208241993_208242146_208243426_208243605_208245318_208245425_208248368_208248661_208251429_208251568_208253885_208253960_208254342
H1_mix_00054274	chr2	-	2264	8	FSM	ENSG00000144445.17	ENST00000457374.5	2264	8	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_7	9.72478424292429	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATGAAAATCCTTAATTT	NA	False	NA	NA	False	AATAAA	-15	NA	210155302	210040322	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_210040528_210043938_210044105_210075551_210075757_210098085_210098208_210104103_210104302_210129030_210129173_210153494_210154612_210155193
H1_mix_00054276	chr2	-	3538	5	ISM	ENSG00000144445.17	ENST00000452086.5	2334	8	0	55983	0	1543	5prime_fragment	FALSE	canonical	0	0	junction_4	15.6524758424985	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGTGTAGTTGTTTGAA	81	False	NA	-18	True	AATAAA	-22	NA	210171327	210096305	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_210098208_210104103_210104302_210129030_210129173_210153494_210154612_210171148
H1_mix_00054277	chr2	-	9658	11	NNC	ENSG00000178568.15	novel	12097	28	NA	NA	73344	47346	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	58.3925508947845	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGAACAGTGATAGACTGT	NA	False	NA	NA	False	ATTAAA	-33	NA	211592010	211328370	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_211328399_211375718_211384061_211386852_211387151_211387944_211387993_211420440_211420612_211422006_211422105_211424154_211424302_211428407_211428484_211430944_211431101_211561902_211562089_211591902
H1_mix_00054282	chr2	-	8103	45	FSM	ENSG00000115414.21	ENST00000421182.5	8103	45	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_21	758.352004280792	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATGGAGGAGTTTTATC	1	True	NA	-3	True	AATAAA	-34	NA	215436067	215360439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_215361627_215361968_215362080_215364878_215364986_215365504_215365631_215367862_215368028_215370293_215370433_215371908_215372016_215372108_215372301_215373321_215373412_215375213_215375394_215375628_215375719_215376497_215376675_215378174_215378263_215379129_215379318_215382211_215382326_215383327_215383484_215384019_215384185_215384859_215384977_215386688_215386959_215388211_215388302_215391631_215391815_215394527_215394720_215397136_215397224_215397679_215397849_215399256_215399352_215404388_215404656_215406237_215406511_215407126_215407322_215408107_215408198_215408297_215408427_215409562_215409740_215409933_215410115_215414836_215414959_215419241_215419386_215420672_215420802_215422090_215422244_215423349_215423527_215424145_215424326_215425093_215425286_215428179_215428339_215430714_215430853_215431832_215431965_215433323_215433462_215434695_215434825_215435654
H1_mix_00054283	chr2	-	8449	46	FSM	ENSG00000115414.21	ENST00000336916.8	8435	46	0	-14	0	0	multi-exon	FALSE	canonical	3	36	junction_22	558.764088562129	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATGGAGGAGTTTTATC	0	True	NA	-3	True	AATAAA	-34	NA	215436068	215360439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_215361627_215361968_215362080_215364878_215364986_215365504_215365631_215367862_215368028_215370293_215370433_215371908_215372016_215372108_215372376_215373321_215373412_215375213_215375394_215375628_215375719_215376497_215376675_215378174_215378263_215379129_215379318_215380810_215381081_215382211_215382326_215383327_215383484_215384019_215384185_215384859_215384977_215386688_215386959_215388211_215388302_215391631_215391815_215394527_215394720_215397136_215397224_215397679_215397849_215399256_215399352_215404388_215404656_215406237_215406511_215407126_215407322_215408107_215408198_215408297_215408427_215409562_215409740_215409933_215410115_215414836_215414959_215419241_215419386_215420672_215420802_215422090_215422244_215423349_215423527_215424145_215424326_215425093_215425286_215428179_215428339_215430714_215430853_215431832_215431965_215433323_215433462_215434695_215434825_215435654
H1_mix_00054284	chr2	-	8542	45	FSM	ENSG00000115414.21	ENST00000359671.5	8524	45	0	-18	0	0	multi-exon	FALSE	canonical	3	36	junction_21	559.739642103495	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATGGAGGAGTTTTATC	0	True	NA	-3	True	AATAAA	-34	NA	215436068	215360439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_215361627_215361968_215362080_215364878_215364986_215365504_215365631_215367862_215368028_215370293_215370433_215371908_215372376_215373321_215373412_215375213_215375394_215375628_215375719_215376497_215376675_215378174_215378263_215379129_215379318_215380810_215381081_215382211_215382326_215383327_215383484_215384019_215384185_215384859_215384977_215386688_215386959_215388211_215388302_215391631_215391815_215394527_215394720_215397136_215397224_215397679_215397849_215399256_215399352_215404388_215404656_215406237_215406511_215407126_215407322_215408107_215408198_215408297_215408427_215409562_215409740_215409933_215410115_215414836_215414959_215419241_215419386_215420672_215420802_215422090_215422244_215423349_215423527_215424145_215424326_215425093_215425286_215428179_215428339_215430714_215430853_215431832_215431965_215433323_215433462_215434695_215434825_215435654
H1_mix_00054285	chr2	-	7912	44	FSM	ENSG00000115414.21	ENST00000357867.8	7898	44	0	-14	0	0	multi-exon	FALSE	canonical	3	36	junction_20	769.648325639409	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATGGAGGAGTTTTATC	0	True	NA	-3	True	AATAAA	-34	NA	215436068	215360439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_215361627_215361968_215362080_215364878_215364986_215365504_215365631_215367862_215368028_215370293_215370433_215371908_215372016_215373321_215373412_215375213_215375394_215375628_215375719_215376497_215376675_215378174_215378263_215379129_215379318_215382211_215382326_215383327_215383484_215384019_215384185_215384859_215384977_215386688_215386959_215388211_215388302_215391631_215391815_215394527_215394720_215397136_215397224_215397679_215397849_215399256_215399352_215404388_215404656_215406237_215406511_215407126_215407322_215408107_215408198_215408297_215408427_215409562_215409740_215409933_215410115_215414836_215414959_215419241_215419386_215420672_215420802_215422090_215422244_215423349_215423527_215424145_215424326_215425093_215425286_215428179_215428339_215430714_215430853_215431832_215431965_215433323_215433462_215434695_215434825_215435654
H1_mix_00054286	chr2	-	9171	19	FSM	ENSG00000115414.21	ENST00000492816.6	9171	19	0	0	0	0	multi-exon	FALSE	canonical	3	2147	junction_7	433.049426227025	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAAGTTCATCTATTTGA	7668	False	NA	-14	True	AATAAA	-18	NA	215393721	215360861	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_215361627_215361968_215362080_215364878_215364986_215365504_215365631_215367862_215368028_215370293_215370433_215371908_215372016_215372108_215372376_215373321_215373412_215375213_215375394_215375628_215375719_215376497_215376675_215378174_215378263_215379129_215382326_215383327_215383484_215384019_215384977_215386688_215386959_215388211_215388302_215391631
H1_mix_00054295	chr2	-	276	1	Intergenic	novelGene_758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGTAAGATTTATTTCAT	NA	False	NA	NA	False	NA	NA	NA	215922578	215922302	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_-_215922300_215922600
H1_mix_00054296	chr2	-	2336	6	NNC	ENSG00000118242.16	novel	2618	6	NA	NA	-14	15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	46.6630474787063	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACTCTCGGTCTCAGAA	-16	True	NA	-15	True	AATAAA	-28	NA	216013627	215942789	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_215943589_215944270_215944998_215945570_215945735_215947022_215947114_215996305_215996466_216013232
H1_mix_00054297	chr2	-	1689	6	NNC	ENSG00000118242.16	novel	2618	6	NA	NA	-19	3	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	45.0759359303831	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCGTATTGTTTTACTC	-21	True	NA	-27	True	AATAAA	-16	NA	216013632	215942801	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_215943458_215944779_215944998_215945570_215945735_215947022_215947114_215996305_215996466_216013232
H1_mix_00054298	chr2	-	1761	10	FSM	ENSG00000127837.10	ENST00000420660.5	1761	10	0	0	0	0	multi-exon	FALSE	canonical	3	1185	junction_1	37.415913957619	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAATGTAAATAAAA	9594	False	NA	-39	True	NA	NA	NA	218269740	218264161	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_218264609_218265019_218265175_218265370_218265462_218265578_218265683_218265830_218265947_218266063_218266148_218266442_218266588_218266846_218266987_218267493_218267614_218269381
H1_mix_00054302	chr2	-	2331	12	NIC	ENSG00000135926.15	novel	2292	12	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	63.5635947576315	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTATGGCTCCAGGAGT	1	True	NA	-5	True	AATAAA	-22	NA	218287283	218274196	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_218275622_218276025_218276080_218277003_218277100_218277365_218277454_218277632_218277671_218277934_218277975_218278514_218278566_218279037_218279092_218279288_218279354_218280025_218280127_218281939_218282182_218287206
H1_mix_00054307	chr2	-	3353	26	FSM	ENSG00000135913.11	ENST00000418019.5	3353	26	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_24	16.2406896405294	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAGGGCCAAACCAAAAGA	1719	False	NA	NA	False	NA	NA	NA	218568291	218454814	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_218455018_218455579_218455719_218457091_218457162_218459789_218459906_218463305_218463367_218466009_218466177_218474629_218474886_218476839_218476982_218479649_218479716_218482069_218482235_218485663_218485744_218488303_218488422_218495759_218495951_218497733_218497858_218498025_218498158_218509978_218510141_218529955_218530041_218534608_218534707_218546220_218546299_218546918_218547092_218549808_218549910_218553552_218553725_218558497_218558678_218560819_218560884_218562717_218562814_218568177
H1_mix_00054308	chr2	-	486	5	FSM	ENSG00000135913.11	ENST00000478329.1	486	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	30.8413277924281	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCTCACCAACAGCAGCAA	NA	False	NA	NA	False	AATAAA	-17	NA	218549824	218510006	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_218510141_218529955_218530041_218546220_218546299_218546918_218547092_218549808
H1_mix_00054309	chr2	-	6098	10	NIC	ENSG00000115568.16	novel	5909	10	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_6	15.2461288347057	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTTACTACATTATAGAT	6	True	NA	0	True	TATAAA	-17	NA	218659618	218637915	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_218638809_218640663_218640770_218642027_218645065_218646170_218646349_218648634_218649460_218650358_218650527_218656149_218656464_218658700_218658877_218658979_218659131_218659368
H1_mix_00054310	chr2	-	1435	10	NNC	ENSG00000163481.8	novel	1477	10	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	80.7795353622026	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGGCTTTCTTTGCTTA	7242	False	NA	-37	True	AATAAA	-13	NA	218671965	218663893	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_218664536_218664738_218664874_218665154_218665245_218665915_218666060_218666158_218666231_218667911_218667982_218668078_218668147_218668238_218668342_218668604_218668680_218671929
H1_mix_00054311	chr2	-	312	1	FSM	ENSG00000224928.2	ENST00000432100.1	650	1	-74	412	-74	-412	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGCCATTAAAGATGCCAA	NA	False	NA	NA	False	GGGGCT	-43	NA	218954124	218953812	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_218953800_218954100
H1_mix_00054315	chr2	-	968	4	FSM	ENSG00000115657.14	ENST00000485773.5	962	4	0	-6	0	6	multi-exon	FALSE	canonical	3	246	junction_3	24.9310159350869	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGTGGCTTTGTGGGAT	7868	False	NA	-2	True	AATAAA	-20	NA	219211108	219209765	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219210047_219210229_219210299_219210380_219210824_219210933
H1_mix_00054316	chr2	-	3012	12	FSM	ENSG00000115657.14	ENST00000497882.5	3008	12	0	-4	0	4	multi-exon	FALSE	canonical	3	194	junction_8	32.5779421395764	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCACTGTGGCTTTGTGGG	3091	False	NA	-4	True	AATAAA	-18	NA	219215885	219209767	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219210047_219210229_219210299_219210380_219210476_219210710_219210824_219210933_219211109_219212386_219212492_219213007_219213066_219213240_219213327_219213438_219213503_219213589_219213667_219213825_219213952_219214120
H1_mix_00054317	chr2	-	2884	18	FSM	ENSG00000115657.14	ENST00000295750.5	2878	18	0	-6	0	6	multi-exon	TRUE	canonical	1	2	junction_17	61.3292774848735	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGTGGCTTTGTGGGAT	NA	False	NA	-2	True	AATAAA	-20	NA	219218994	219209765	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219210047_219210229_219210299_219210380_219210476_219210710_219210824_219210933_219211109_219212386_219212492_219213007_219213066_219213240_219213327_219213438_219213503_219213589_219213667_219213825_219213952_219214120_219214187_219214388_219214499_219214960_219215083_219215996_219216181_219216363_219216466_219216651_219216833_219218124
H1_mix_00054320	chr2	-	5898	23	Fusion	ENSG00000115657.14_ENSG00000198925.12	novel	3770	16	NA	NA	0	0	multi-exon	FALSE	canonical	2	182	junction_6	116.631093553439	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCCATCATCAAATATCAG	-18	True	NA	NA	False	NA	NA	NA	219229626	219214140	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr2_-_219214187_219214388_219214499_219214960_219215083_219215996_219216181_219216363_219216466_219216651_219216833_219217669_219217808_219218124_219220453_219220746_219220893_219221079_219221303_219222049_219222168_219222271_219222451_219222644_219222894_219223584_219223765_219223868_219224023_219224105_219224855_219225070_219225213_219225410_219225573_219226868_219226934_219227769_219227814_219227921_219228054_219228433_219228486_219229534
H1_mix_00054321	chr2	-	3893	17	NIC	ENSG00000198925.12	novel	3770	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	62	junction_16	127.405219060092	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGTTGTCTCGCGCGG	14	True	NA	-3	True	AATAAA	-18	NA	219229594	219219379	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_219220453_219220746_219220893_219221079_219221303_219222049_219222168_219222271_219222451_219222644_219222894_219223584_219223765_219223868_219224023_219224105_219224855_219225070_219225213_219225410_219225573_219226868_219226934_219227769_219227814_219227921_219228054_219228433_219228486_219229009_219229175_219229534
H1_mix_00054332	chr2	-	650	4	ISM	ENSG00000124006.15	ENST00000373876.5	5503	20	18538	-20	11	-7	3prime_fragment	FALSE	canonical	3	35	junction_3	27.5358352374178	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTCATTTCCTTGCCTC	7	True	NA	-11	True	AATAAA	-7	NA	219552703	219550735	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_219550843_219551528_219551799_219552111_219552217_219552535
H1_mix_00054333	chr2	-	689	1	FSM	ENSG00000124006.15	ENST00000596474.1	544	1	32	-177	32	177	mono-exon	FALSE	NA	NA	NA	NA	NA	754	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCAAGTCTGCTTGAGTG	NA	False	NA	NA	False	NA	NA	NA	219554740	219554051	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219554100_219554700
H1_mix_00054334	chr2	-	1774	5	FSM	ENSG00000124006.15	ENST00000604031.5	1774	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	36.7899442782943	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATAAAAATTAGC	9560	False	NA	NA	False	NA	NA	NA	219562512	219555460	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219556293_219556453_219556724_219557822_219558111_219559224_219559498_219562401
H1_mix_00054335	chr2	-	1571	5	FSM	ENSG00000124006.15	ENST00000456147.1	1571	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	26.0144190786571	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGACTTGCCATGGGCAT	NA	False	NA	-5	True	TATAAA	-16	NA	219559431	219555762	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219556293_219556453_219556724_219557822_219558111_219558183_219558460_219559224
H1_mix_00054339	chr2	-	2491	2	FSM	ENSG00000171951.5	ENST00000305409.3	2434	2	-60	3	-60	-3	multi-exon	FALSE	canonical	1	1	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTTTGGACTCTTAATTA	347	False	NA	53	True	AATAAA	-14	NA	223602421	223596942	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_223599297_223602284
H1_mix_00054340	chr2	-	308	2	FSM	ENSG00000085449.15	ENST00000491453.1	308	2	0	0	0	0	multi-exon	FALSE	canonical	3	625	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACGCTGGGGCTAAGACA	2464	False	NA	NA	False	CATAAA	-17	NA	223894460	223884668	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_223884750_223894233
H1_mix_00054345	chr2	-	2199	8	FSM	ENSG00000236432.8	ENST00000658093.1	2199	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	5.16661180572146	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACAAATTACTCAGTCTC	7268	False	NA	-10	True	AATAAA	-10	NA	227325216	227258484	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_227259284_227264668_227265439_227265874_227265936_227268627_227268770_227279482_227279579_227281703_227281790_227305459_227305656_227325167
H1_mix_00054346	chr2	-	1501	5	FSM	ENSG00000135917.16	ENST00000642268.1	1643	5	142	0	142	0	multi-exon	FALSE	canonical	0	0	junction_4	8.69985632065266	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAGAGAGTAATATCATC	NA	False	NA	NA	False	NA	NA	NA	227701110	227687434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_227687574_227688165_227688308_227695888_227696082_227698735_227699565_227700912
H1_mix_00054347	chr2	-	3089	12	NIC	ENSG00000187957.8	novel	3257	13	NA	NA	45	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_4	20.2981902869596	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGTTGTCTCTTTTGTTC	17	True	NA	-3	True	AATAAA	-18	NA	229714510	229357628	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_229358652_229366872_229367120_229388264_229388397_229407231_229407346_229447315_229447541_229477139_229477254_229512782_229512937_229546946_229547093_229585857_229586025_229588393_229588489_229591579_229591889_229714147
H1_mix_00054348	chr2	-	1009	3	FSM	ENSG00000153827.14	ENST00000459841.1	1009	3	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_2	13	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGCAAAAATTAGCTGGG	5233	False	NA	NA	False	NA	NA	NA	229778575	229773560	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_229774262_229777314_229777480_229778432
H1_mix_00054350	chr2	-	976	4	FSM	ENSG00000153827.14	ENST00000487178.1	977	4	0	1	0	-1	multi-exon	FALSE	canonical	3	206	junction_2	23.4710223230453	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTAAGAATTGTGTTGT	9250	False	NA	NA	False	NA	NA	NA	229806149	229802251	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_229802460_229803570_229803690_229803998_229804228_229805729
H1_mix_00054351	chr2	-	2552	16	FSM	ENSG00000153827.14	ENST00000479037.5	2938	16	0	386	0	-386	multi-exon	FALSE	canonical	3	129	junction_14	30.0010370191136	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTTCATCGTACCGTTT	-7	True	NA	NA	False	NA	NA	NA	229922009	229807704	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_229807865_229808251_229808370_229810879_229811046_229811135_229811205_229813869_229814032_229814232_229814326_229815098_229815195_229815272_229815309_229818363_229818513_229829192_229829289_229830755_229830840_229836847_229836985_229840821_229840928_229858771_229859575_229879981_229880129_229921879
H1_mix_00054356	chr2	-	516	1	FSM	ENSG00000172799.5	ENST00000423890.1	504	1	7	-19	7	19	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTATGAAGAACTGTTTT	11	False	NA	NA	False	AAAAAG	-7	NA	231434419	231433903	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_231433900_231434400
H1_mix_00054357	chr2	-	3235	13	FSM	ENSG00000115053.17	ENST00000676514.1	3235	13	0	0	0	0	multi-exon	FALSE	canonical	3	3985	junction_7	489.302132009343	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTTACTTCCTAAAGAGT	NA	False	NA	-17	True	ATTAAA	-20	NA	231464518	231454747	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_231455268_231455400_231455625_231456009_231456765_231457000_231457125_231457642_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231464335
H1_mix_00054358	chr2	-	4237	11	FSM	ENSG00000115053.17	ENST00000678729.1	4237	11	0	0	0	0	multi-exon	FALSE	canonical	3	3985	junction_5	508.256195240156	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTTTTGTTTTTGTT	NA	False	NA	73	True	NA	NA	NA	231464551	231454878	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_231455268_231455400_231455625_231456009_231456137_231456630_231456765_231457000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231464335
H1_mix_00054359	chr2	-	2205	15	FSM	ENSG00000115053.17	ENST00000356936.6	2205	15	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_6	1687.71230259382	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTCCCTCTGCTTTCC	136	False	NA	NA	False	NA	NA	NA	231464353	231455190	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_231455268_231455400_231455625_231456009_231456137_231456630_231456765_231457000_231457125_231457285_231457358_231457642_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231464335
H1_mix_00054360	chr2	-	1205	1	FSM	ENSG00000223198.1	ENST00000411266.1	212	1	-1003	10	-1003	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATCCCAGCACTTTGGGA	NA	False	NA	83	True	NA	NA	NA	231503204	231501999	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_231502000_231503200
H1_mix_00054361	chr2	-	1284	3	FSM	ENSG00000181798.4	ENST00000313064.4	1325	3	44	-3	33	-2	multi-exon	FALSE	canonical	3	10	junction_2	7.5	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTGTGGCTCATACCCT	13	True	NA	NA	False	AATAAA	-16	NA	231514352	231508421	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_231509344_231513526_231513633_231514096
H1_mix_00054363	chr2	-	4320	4	Fusion	ENSG00000204121.2_ENSG00000237087.1	novel	576	2	NA	NA	342	4538	multi-exon	FALSE	canonical	1	3	junction_1	41.907305117631	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAAATGTGGTTGATTTC	222	False	NA	-7	True	AATAAA	-23	NA	232421119	232411279	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr2_-_232413604_232418028_232418128_232418398_232418468_232419291
H1_mix_00054365	chr2	-	273	1	FSM	ENSG00000213055.3	ENST00000451177.1	676	1	373	30	373	-30	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATGTGGCTGCTTTCAA	NA	False	NA	NA	False	NA	NA	NA	232729825	232729552	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_232729600_232729800
H1_mix_00054366	chr2	-	2172	13	FSM	ENSG00000066248.15	ENST00000373552.8	2286	13	114	0	114	0	multi-exon	TRUE	canonical	2	4	junction_8	11.931226536558	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAAGGGGGTGGGCACAC	1073	False	NA	NA	False	NA	NA	NA	232928040	232879214	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_232879680_232881145_232881251_232882185_232882266_232883310_232883467_232883980_232884145_232885279_232885370_232888032_232888108_232891357_232891488_232892897_232893051_232894755_232894917_232920283_232920586_232927043_232927187_232927892
H1_mix_00054367	chr2	-	2565	6	FSM	ENSG00000085982.15	ENST00000483519.5	2722	6	157	0	-22	0	multi-exon	FALSE	canonical	3	16	junction_5	3.81575680566778	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTAGCTGCTTTTGGTT	496	False	NA	-7	True	AATAAA	-19	NA	233489483	233475525	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_233477504_233481202_233481298_233485530_233485627_233485766_233485978_233488238_233488305_233489364
H1_mix_00054369	chr2	-	1185	6	FSM	ENSG00000085982.15	ENST00000409945.1	1946	6	0	761	0	-761	multi-exon	FALSE	canonical	3	25	junction_3	1.78885438199983	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGAACAGAATGGGATTT	5748	False	NA	NA	False	NA	NA	NA	233512502	233493424	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_233493552_233496757_233496833_233498547_233498613_233499878_233499916_233510048_233510136_233511708
H1_mix_00054370	chr2	-	806	7	FSM	ENSG00000123485.12	ENST00000454020.1	806	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	187.360392470412	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGGAGCCAGACGTTCTC	5	True	NA	NA	False	AAAACA	-6	NA	233854474	233841850	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_233842206_233844204_233844284_233845727_233845821_233847396_233847462_233852564_233852621_233853843_233853911_233854383
H1_mix_00054371	chr2	-	634	7	FSM	ENSG00000123485.12	ENST00000453122.1	634	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	178.813139586801	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAGACATGGCCTTAGTA	-2	True	NA	NA	False	NA	NA	NA	233854535	233842115	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_233842206_233844204_233844284_233845727_233845821_233849762_233849860_233852564_233852621_233853843_233853911_233854383
H1_mix_00054372	chr2	-	3221	19	FSM	ENSG00000132321.17	ENST00000409907.8	3215	19	0	-6	0	2	multi-exon	FALSE	canonical	2	11	junction_8	7.26079443328821	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTAATTTGGTTGCTGGAG	-10	True	NA	2	True	AATAAA	-22	NA	236507476	236324144	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_236324784_236331358_236331598_236338204_236338383_236344556_236344644_236363779_236363980_236368193_236368302_236377102_236377186_236380568_236380634_236391975_236392072_236392243_236392351_236399412_236399489_236419148_236419272_236441039_236441125_236465504_236465711_236486828_236486901_236487999_236488192_236493767_236493888_236497162_236497488_236507256
H1_mix_00054374	chr2	-	536	2	FSM	ENSG00000163359.17	ENST00000493475.2	669	2	1	132	1	-132	multi-exon	FALSE	canonical	2	5	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAAAAACTAGATTTC	8983	False	NA	NA	False	NA	NA	NA	237357882	237356921	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_237357392_237357816
H1_mix_00054375	chr2	-	937	2	FSM	ENSG00000124839.13	ENST00000466244.1	937	2	0	0	0	0	multi-exon	FALSE	canonical	3	976	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCACAGCGACGGTGGGA	NA	False	NA	NA	False	NA	NA	NA	237575884	237574689	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_237575129_237575386
H1_mix_00054380	chr2	-	1330	4	NNC	ENSG00000144485.11	novel	1368	4	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	2	7	junction_1	160.607873060099	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTGTTGAGTGATGTGTC	645	False	NA	-8	True	AATAAA	-27	NA	238240024	238238266	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_238239252_238239510_238239569_238239660_238239748_238239824
H1_mix_00054381	chr2	-	474	3	FSM	ENSG00000144485.11	ENST00000417803.5	474	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	169.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTCCTCCCAGGGGTTC	998	False	NA	NA	False	NA	NA	NA	238239671	238238775	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_238239157_238239486_238239569_238239660
H1_mix_00054383	chr2	-	451	3	FSM	ENSG00000132326.12	ENST00000491417.1	575	3	0	124	0	-124	multi-exon	FALSE	canonical	2	3	junction_2	3	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGACAGTCCATAGTACCC	NA	False	NA	NA	False	NA	NA	NA	238262975	238261564	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_238261838_238262190_238262345_238262951
H1_mix_00054384	chr2	-	8610	27	NIC	ENSG00000068024.18	novel	8976	27	NA	NA	29	-13	combination_of_known_junctions	FALSE	canonical	3	7	junction_26	14.9512521491814	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTACTTGCCCTCCCAGCT	26	False	NA	-19	True	AATAAA	-6	NA	239401625	239048184	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_239053137_239053459_239053602_239054748_239054834_239066721_239066856_239068488_239068608_239081094_239081193_239082101_239082222_239084154_239084243_239087558_239087615_239090008_239090117_239095009_239095057_239102775_239102897_239108049_239108184_239111525_239111713_239115052_239115311_239126455_239126680_239134244_239134444_239134526_239134644_239139683_239139797_239144582_239144715_239156651_239156774_239163802_239163924_239176412_239176564_239189832_239190078_239236592_239236665_239352677_239352919_239401401
H1_mix_00054385	chr2	-	1324	9	FSM	ENSG00000130414.13	ENST00000679158.1	1332	9	8	0	5	0	multi-exon	FALSE	canonical	3	6	junction_1	219.250106898492	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTGTGGTTTCAGCGCT	5	True	NA	-112	True	AAAACA	-32	NA	240025381	239960832	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_239961187_240005209_240005296_240007315_240007371_240011616_240011697_240014738_240014861_240018552_240018640_240021196_240021413_240022171_240022341_240025226
H1_mix_00054388	chr2	-	252	2	FSM	ENSG00000144504.16	ENST00000407275.2	252	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAAGGCCTGGACCGAGT	NA	False	NA	NA	False	NA	NA	NA	240500104	240480992	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_240481098_240499957
H1_mix_00054396	chr2	-	802	3	FSM	ENSG00000122085.17	ENST00000406593.1	802	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	45.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTATAAGTCACCTG	1	True	NA	NA	False	NA	NA	NA	241102299	241095868	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_241096439_241097242_241097428_241102252
H1_mix_00054398	chr2	-	5174	6	FSM	ENSG00000115687.14	ENST00000493544.1	5174	6	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_5	19.7787765041218	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCATGTGTGATTTCTGTC	6087	False	NA	0	True	AATAAA	-26	NA	241134769	241113634	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_241115178_241115287_241115414_241122731_241122900_241123948_241124134_241126195_241127452_241132873
H1_mix_00054414	chr2	-	945	5	NNC	ENSG00000168393.13	novel	1051	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_2	362.950668135492	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGTGGAACGCTTCAC	23	True	NA	-10	True	AGTAAA	-15	NA	241686781	241675746	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_241676238_241678451_241678578_241680228_241680320_241685768_241685878_241686653
H1_mix_00054416	chr2	+	399	1	Intergenic	novelGene_655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	355	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCCCAAATCAGATAGCGT	NA	False	NA	NA	False	NA	NA	NA	5002466	5002865	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_5002500_5002900
H1_mix_00054417	chr2	+	822	1	Intergenic	novelGene_656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTCTCTTCATTTTCAC	NA	False	NA	NA	False	NA	NA	NA	5003448	5004270	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_5003400_5004300
H1_mix_00054418	chr2	+	243	1	Intergenic	novelGene_658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAACACCCCCACTGAGCA	NA	False	NA	NA	False	NA	NA	NA	5006257	5006500	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_5006300_5006500
H1_mix_00054420	chr2	+	1258	1	Intergenic	novelGene_667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	297	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTTACTTCTATCCTAG	NA	False	NA	NA	False	NA	NA	NA	20273716	20274974	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_20273700_20275000
H1_mix_00054421	chr2	+	2255	1	Intergenic	novelGene_672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35589559	35591814	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_35589600_35591800
H1_mix_00054422	chr2	+	244	1	Intergenic	novelGene_673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGGGAAGGAAGGGGCCT	4891	False	NA	NA	False	NA	NA	NA	38082073	38082317	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_38082100_38082300
H1_mix_00054423	chr2	+	1967	1	Intergenic	novelGene_675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	40348633	40350600	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_40348600_40350600
H1_mix_00054424	chr2	+	808	1	Intergenic	novelGene_697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTCTGAGGACAGGCCT	4903	False	NA	NA	False	AATAAA	-41	NA	75214040	75214848	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_75214000_75214800
H1_mix_00054426	chr2	+	297	1	Intergenic	novelGene_701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTTTTCTTTGCCTAATA	NA	False	NA	NA	False	NA	NA	NA	78978861	78979158	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_78978900_78979200
H1_mix_00054427	chr2	+	458	1	Intergenic	novelGene_716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACATACACTGCTTCATT	NA	False	NA	NA	False	NA	NA	NA	124084924	124085382	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_124084900_124085400
H1_mix_00054428	chr2	+	238	1	Intergenic	novelGene_718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCTGTAAGGGCTGTGC	NA	False	NA	NA	False	NA	NA	NA	130212269	130212507	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_130212300_130212500
H1_mix_00054429	chr2	+	257	1	Intergenic	novelGene_723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACTCCATTTCTAAATGC	NA	False	NA	NA	False	NA	NA	NA	144945196	144945453	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_144945200_144945500
H1_mix_00054430	chr2	+	942	1	Intergenic	novelGene_726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAGGCATATAAAGGTTT	1078	False	NA	NA	False	TTTAAA	-41	NA	153534827	153535769	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_153534800_153535800
H1_mix_00054431	chr2	+	227	1	Intergenic	novelGene_729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCCACCTTAACCCACAA	NA	False	NA	NA	False	NA	NA	NA	154869963	154870190	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_154870000_154870200
H1_mix_00054433	chr2	+	312	1	Intergenic	novelGene_739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	200	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCCCACAACAGTGGGTG	NA	False	NA	NA	False	NA	NA	NA	164462976	164463288	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_164463000_164463300
H1_mix_00054434	chr2	+	219	1	Intergenic	novelGene_743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	342	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGCATGAAATTAACCACACT	NA	False	NA	NA	False	NA	NA	NA	183530128	183530347	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_183530100_183530300
H1_mix_00054435	chr2	+	307	1	Intergenic	novelGene_748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGGTGATTTTTATTTG	1344	False	NA	NA	False	NA	NA	NA	196979554	196979861	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_196979600_196979900
H1_mix_00054436	chr2	+	1276	1	Intergenic	novelGene_756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCTGTAATTCCAGCTAC	NA	False	NA	NA	False	AATAGA	-35	NA	214328871	214330147	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_214328900_214330100
H1_mix_00054440	chr2	+	1320	13	NIC	ENSG00000172554.12	novel	1907	17	NA	NA	9	-5	combination_of_known_junctions	FALSE	canonical	3	7	junction_12	30.992270541755	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGACATGATGAATTTTTT	1	True	NA	NA	False	AATAAA	-18	NA	950876	1256599	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_951069_1083517_1083656_1098195_1098253_1098352_1098411_1137621_1137666_1137767_1137810_1165547_1165636_1173091_1173184_1209102_1209231_1237887_1238018_1239737_1239777_1247326_1247444_1256404
H1_mix_00054441	chr2	+	1581	13	NIC	ENSG00000172554.12	novel	1907	17	NA	NA	9	68	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	24.4005919782469	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAATGATTCTTTCCTGC	1	True	NA	-91	True	ATTAAA	-11	NA	950876	1367516	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_951069_1083517_1083656_1165547_1165636_1173091_1173184_1209102_1209231_1237887_1238018_1239737_1239777_1247326_1247444_1259369_1259442_1267364_1267572_1308493_1308587_1316264_1316376_1367342
H1_mix_00054442	chr2	+	499	2	ISM	ENSG00000172554.12	ENST00000452177.5	1818	8	14	77842	14	-77842	5prime_fragment	FALSE	canonical	3	104	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTCTCTCCCTGACTTT	6	True	NA	13	True	AATACA	-19	NA	950881	1083829	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_951069_1083517
H1_mix_00054444	chr2	+	473	1	FSM	ENSG00000271868.1	ENST00000607415.1	473	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCCTGGGAAAAGAAAATG	NA	False	NA	NA	False	AATAAA	-19	NA	3496955	3497428	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_3497000_3497400
H1_mix_00054445	chr2	+	469	3	ISM	ENSG00000242540.3	ENST00000455579.2	1199	4	-18	4234	-18	-4234	5prime_fragment	FALSE	canonical	1	2	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATTTGAGTGGATTTGT	616	False	NA	NA	False	NA	NA	NA	5696201	5703861	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_5696294_5701465_5701548_5703566
H1_mix_00054446	chr2	+	1096	1	FSM	ENSG00000272002.1	ENST00000606959.1	634	1	-464	2	-464	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCTTCTGTGCATTA	NA	False	NA	NA	False	AATAAA	-21	NA	7260406	7261502	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_7260400_7261500
H1_mix_00054447	chr2	+	313	2	Intergenic	novelGene_659	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATATACGTGCAAGTCACA	NA	False	NA	NA	False	NA	NA	NA	7872786	7878832	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_7872915_7878647
H1_mix_00054448	chr2	+	305	4	FSM	ENSG00000115750.17	ENST00000416181.1	297	4	-8	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	27.8128667266709	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATACCCAAATAAAAGCCC	-2	True	NA	NA	False	NA	NA	NA	9843518	9849407	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_9843560_9845219_9845319_9846056_9846187_9849372
H1_mix_00054449	chr2	+	1881	12	FSM	ENSG00000134317.18	ENST00000405379.6	1881	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	5.58036700117193	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCTTACCCTCTCACTCT	9251	False	NA	NA	False	NA	NA	NA	9961164	10001205	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_9961437_9963885_9964043_9964234_9964347_9965286_9965382_9986123_9986283_9990695_9990748_9992006_9992147_9993206_9993245_9995878_9995971_9996315_9996402_9998964_9999030_10000592
H1_mix_00054450	chr2	+	748	1	FSM	ENSG00000243819.4	ENST00000607781.1	1756	1	-338	1346	-338	-1346	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAAACCCCGTCTCTACT	NA	False	NA	NA	False	NA	NA	NA	10690005	10690753	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_10690000_10690800
H1_mix_00054451	chr2	+	6905	22	NNC	ENSG00000196208.14	novel	8444	32	NA	NA	7353	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_5	22.7301033075497	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTTTGTTGGTGAGTA	3403	False	NA	12	True	AATAAA	-15	NA	11595608	11642786	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_11596240_11597780_11597979_11598679_11598861_11600799_11600996_11602405_11602543_11603353_11603400_11610687_11611028_11612494_11612611_11615090_11615291_11616630_11616721_11618287_11618920_11620904_11621008_11625153_11625313_11626961_11627105_11629947_11630110_11631908_11632114_11632888_11633064_11634130_11634350_11635269_11635406_11637715_11637917_11638670_11638810_11640290
H1_mix_00054452	chr2	+	3063	22	FSM	ENSG00000134324.12	ENST00000449576.6	3077	22	14	0	14	0	multi-exon	FALSE	canonical	0	0	junction_1	19.307747554965	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGCGTCATCATTGGCCTG	12	False	NA	NA	False	ATTAAA	-42	NA	11677608	11824887	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_11677729_11713755_11713813_11765532_11765734_11767762_11767859_11771371_11771680_11773619_11773746_11776085_11776194_11779518_11779646_11782200_11782508_11783828_11783923_11784885_11785077_11787073_11787168_11788386_11788457_11791913_11792007_11795407_11795488_11802906_11803034_11804422_11804572_11805069_11805157_11815087_11815241_11819483_11819599_11820410_11820515_11824631
H1_mix_00054453	chr2	+	5477	21	NIC	ENSG00000134324.12	novel	3077	22	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	16.1876496132082	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGTGTGTGAATTTTAAA	12	False	NA	20	True	AATAAA	-29	NA	11677608	11827409	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_11677729_11713755_11713813_11765532_11765734_11767762_11767859_11771371_11771680_11773619_11773746_11779518_11779646_11782200_11782508_11783828_11783923_11784885_11785077_11787073_11787168_11788386_11788457_11791913_11792007_11795407_11795488_11802906_11803034_11804422_11804572_11805069_11805157_11815087_11815241_11819483_11819599_11820410_11820515_11824631
H1_mix_00054454	chr2	+	5448	21	FSM	ENSG00000134324.12	ENST00000674199.1	5448	21	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	14.3286426433211	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGTGTGTGAATTTTAAA	14	True	NA	20	True	AATAAA	-29	NA	11746631	11827409	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_11746672_11765532_11765734_11767762_11767859_11771371_11771680_11773619_11773746_11776085_11776194_11779518_11779646_11782200_11782508_11783828_11783923_11784885_11785077_11787073_11787168_11788386_11788457_11791913_11792007_11795407_11795488_11802906_11803034_11804422_11804572_11805069_11805157_11815087_11815241_11819483_11819599_11820410_11820515_11824631
H1_mix_00054455	chr2	+	2053	2	FSM	ENSG00000162981.14	ENST00000497769.2	2053	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTTTCTTTGTTTTGG	506	False	NA	NA	False	AATAAA	-15	NA	14635090	14650814	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_14635645_14649315
H1_mix_00054456	chr2	+	1709	2	FSM	ENSG00000134323.12	ENST00000638417.1	1693	2	-16	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAACTCAACCTTTTCCTT	-1	True	NA	19	True	AATAAA	-19	NA	15940549	15947007	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_15940744_15945492
H1_mix_00054457	chr2	+	2163	2	NIC	ENSG00000170745.12	novel	2341	3	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAATGTCTTGGTTGTA	-10	True	NA	16	True	AATAAA	-16	NA	17878648	17932954	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_17878807_17930949
H1_mix_00054458	chr2	+	3728	1	FSM	ENSG00000223691.1	ENST00000441585.1	1978	1	-2225	475	-2225	-475	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTCCTCTTCTAGGCCA	NA	False	NA	NA	False	ATTAAA	-8	NA	22186110	22189838	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_22186100_22189800
H1_mix_00054459	chr2	+	5318	14	FSM	ENSG00000119771.15	ENST00000486442.6	5325	14	7	0	7	0	multi-exon	TRUE	canonical	0	0	junction_1	4.94586074020877	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGAAGCCAACGTAATCT	7	True	NA	9	True	AATAAA	-19	NA	23385185	23708606	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_23385781_23475559_23475668_23562151_23562482_23639138_23639281_23642337_23642851_23684398_23684538_23691673_23691877_23693268_23693529_23695622_23695822_23695950_23696134_23696332_23696514_23703185_23703380_23703718_23703864_23706480
H1_mix_00054460	chr2	+	674	5	FSM	ENSG00000205639.12	ENST00000453731.1	674	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	276.91187677671	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCTCTCTGCCCAAGTT	NA	False	NA	NA	False	GGGGCT	-40	NA	24024152	24063321	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_24024272_24033166_24033258_24053901_24053950_24060813_24060927_24063018
H1_mix_00054461	chr2	+	2119	9	NIC	ENSG00000219626.9	novel	1369	11	NA	NA	-18	-6	intron_retention	FALSE	canonical	3	5	junction_6	7.90174031463955	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTCACTAAGTGTCCATC	NA	False	NA	-2	True	AATAAA	-13	NA	24123450	24169631	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_24124461_24135118_24135188_24137908_24138101_24139369_24139451_24146747_24146836_24146929_24147087_24161505_24161614_24164197_24164336_24169355
H1_mix_00054462	chr2	+	457	4	ISM	ENSG00000219626.9	ENST00000615575.5	1369	11	14	31524	14	-8687	5prime_fragment	FALSE	canonical	3	10	junction_1	6.23609564462324	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGCTTTTTTCAGTTG	14	True	NA	NA	False	AATAAA	-18	NA	24123482	24138114	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_24123534_24124329_24124461_24135118_24135188_24137908
H1_mix_00054463	chr2	+	7008	22	NIC	ENSG00000084676.16	novel	7381	23	NA	NA	39	-195	combination_of_known_splicesites	FALSE	canonical	2	11	junction_1	41.9042207757269	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCTTGCTTCTATGTAA	31	False	NA	15	True	ATTAAA	-27	NA	24491292	24770507	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_24491603_24584475_24584561_24643965_24644123_24658660_24658767_24665748_24665916_24673365_24673464_24682950_24683129_24691480_24691661_24693251_24693348_24697657_24697799_24705085_24705234_24706567_24707889_24710930_24711112_24726588_24726707_24728307_24728477_24729500_24729816_24739431_24739534_24741783_24742187_24751981_24752157_24757972_24758157_24762686_24762777_24768223
H1_mix_00054464	chr2	+	7141	23	NIC	ENSG00000084676.16	novel	7381	23	NA	NA	55	-182	combination_of_known_junctions	FALSE	canonical	3	12	junction_22	36.1190924993307	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTAATTCCTGTCATTCC	47	False	NA	28	True	AATAAA	-13	NA	24491308	24770520	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_24491603_24564294_24564431_24584475_24584561_24643965_24644123_24658660_24658767_24665748_24665916_24673365_24673464_24682950_24683129_24691480_24691661_24693251_24693348_24697657_24697799_24705085_24705234_24706567_24707889_24710930_24711112_24726588_24726707_24728307_24728477_24729500_24729816_24739431_24739534_24741783_24742187_24751981_24752157_24757972_24758157_24762686_24762777_24768223
H1_mix_00054469	chr2	+	2027	1	FSM	ENSG00000271936.1	ENST00000606114.1	1108	1	-1028	109	-1028	-109	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTTGATGTCATTTG	NA	False	NA	4	True	AATATA	-16	NA	24824581	24826608	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_24824600_24826600
H1_mix_00054470	chr2	+	731	5	ISM	ENSG00000084710.14	ENST00000401432.7	5162	19	-17	26048	-17	-26048	5prime_fragment	FALSE	canonical	3	9	junction_4	6.04152298679729	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACGGTGGGTCCTGTAGAT	21	True	NA	NA	False	NA	NA	NA	25042112	25121840	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_25042320_25091324_25091402_25093002_25093131_25103636_25103788_25121672
H1_mix_00054471	chr2	+	6730	18	ISM	ENSG00000084710.14	ENST00000405108.5	2432	20	12231	-4572	6546	2	3prime_fragment	TRUE	canonical	2	5	junction_13	4.43406130471594	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGTCTGTTTGATTTCT	NA	False	NA	8	True	AATAAA	-20	NA	25128218	25159137	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_25128333_25129974_25130110_25130551_25130631_25131367_25131504_25131749_25131912_25132902_25133015_25133382_25133435_25135466_25135640_25136522_25136599_25137340_25137503_25139058_25139191_25141365_25141434_25143734_25143863_25144959_25145052_25149693_25149743_25151913_25152021_25153711_25153762_25154234
H1_mix_00054472	chr2	+	338	1	FSM	ENSG00000217643.1	ENST00000407942.1	482	1	250	-106	250	106	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTACTTTGACCCATTT	353	False	NA	NA	False	NA	NA	NA	25822718	25823056	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_25822700_25823100
H1_mix_00054474	chr2	+	2969	17	NNC	ENSG00000119777.20	novel	2978	17	NA	NA	5	-1	intron_retention	TRUE	canonical	1	59	junction_10	67.7845564546232	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCTAGCATTCTTGTCT	-5	True	NA	13	True	AATAAA	-13	NA	27032969	27041686	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_27033167_27034066_27034267_27035134_27035286_27035593_27035729_27035969_27036053_27036486_27036593_27036704_27036787_27037076_27037179_27037560_27037703_27038145_27038242_27038483_27038533_27038701_27038816_27039046_27039165_27039740_27039838_27040029_27040199_27040344_27040497_27040710
H1_mix_00054475	chr2	+	1967	3	FSM	ENSG00000119777.20	ENST00000460665.1	1967	3	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_1	45.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTAGCATTCTTGTCTG	2260	False	NA	14	True	AATAAA	-14	NA	27039360	27041687	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27040199_27040344_27040497_27040710
H1_mix_00054476	chr2	+	1618	8	NNC	ENSG00000138030.13	novel	2411	8	NA	NA	-10	1	intron_retention	FALSE	canonical	3	4	junction_2	71.1571987839285	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCCTCTCAATGTCTGA	-10	True	NA	9	True	AATAAA	-17	NA	27086761	27099970	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_27087352_27092331_27092449_27094473_27094612_27096728_27096802_27097502_27097650_27099195_27099285_27099419_27099578_27099664
H1_mix_00054478	chr2	+	3234	1	Genic_Genomic	ENSG00000234072.1	novel	NA	NA	NA	NA	-104	13	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAAACTCATTAAG	0	True	NA	NA	False	AATAAA	-31	NA	27357035	27360269	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr2_+_27357000_27360300
H1_mix_00054479	chr2	+	1957	14	FSM	ENSG00000115234.11	ENST00000440760.5	1955	14	-2	0	0	0	multi-exon	TRUE	canonical	1	6	junction_2	281.866160694005	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGGTTCCCTCTCACT	0	True	NA	20	True	ATTAAA	-20	NA	27370614	27377127	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27370807_27371268_27371469_27373246_27373312_27373860_27373972_27374084_27374176_27374345_27374434_27374688_27374759_27375060_27375154_27375505_27375710_27375845_27375972_27376105_27376184_27376312_27376388_27376478_27376521_27376605
H1_mix_00054481	chr2	+	788	5	ISM	ENSG00000157992.12	ENST00000453171.5	665	6	0	4	0	0	intron_retention	FALSE	canonical	3	64	junction_1	203.311337608113	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTACTTGATTATGATTC	5	True	NA	14	True	AATAAA	-15	NA	27442397	27444291	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_27442441_27442841_27442902_27443073_27443281_27443397_27443533_27443948
H1_mix_00054482	chr2	+	1583	3	ISM	ENSG00000157992.12	ENST00000464699.5	724	5	-327	8	20	-2	intron_retention	FALSE	canonical	3	540	junction_2	19.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCTACTTGATTATGAT	25	True	NA	12	True	AATAAA	-13	NA	27442417	27444289	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_27442902_27443073_27443281_27443397
H1_mix_00054483	chr2	+	1072	4	ISM	ENSG00000157992.12	ENST00000453171.5	665	6	115	6	67	-2	intron_retention	FALSE	canonical	3	429	junction_3	63.545259461269	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCTACTTGATTATGAT	69	False	NA	12	True	AATAAA	-13	NA	27442512	27444289	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_27442902_27443073_27443281_27443397_27443533_27443948
H1_mix_00054484	chr2	+	397	2	FSM	ENSG00000235267.1	ENST00000417130.1	397	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGTAATACATATTTACA	NA	False	NA	NA	False	NA	NA	NA	27455155	27455862	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_27455424_27455733
H1_mix_00054485	chr2	+	6200	1	Genic_Genomic	ENSG00000221843.5	novel	NA	NA	NA	NA	39136	1	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCCTGTGCATCTGGAC	NA	False	NA	NA	False	AATAAA	-14	NA	27576521	27582721	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr2_+_27576500_27582700
H1_mix_00054486	chr2	+	1260	12	NIC	ENSG00000198522.14	novel	1832	14	NA	NA	6	-43	combination_of_known_junctions	FALSE	canonical	3	87	junction_2	193.191079991882	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCCCTTGTATTTATGCA	-11	True	NA	NA	False	NA	NA	NA	27629029	27650413	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_27629170_27629858_27629953_27632632_27632671_27634845_27634925_27635139_27635235_27638209_27638256_27638884_27639032_27640042_27640126_27641239_27641280_27642428_27642520_27647835_27647944_27650114
H1_mix_00054490	chr2	+	625	5	FSM	ENSG00000163811.12	ENST00000466067.1	628	5	0	3	0	-3	multi-exon	FALSE	canonical	3	480	junction_1	14.0956553590104	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TACTTTAGACAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	28925096	28935737	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_28925154_28926467_28926555_28927568_28927701_28929578_28929711_28935520
H1_mix_00054492	chr2	+	3040	4	FSM	ENSG00000213626.13	ENST00000412933.5	550	4	-5	-2485	-3	5	multi-exon	FALSE	canonical	0	0	junction_2	108.894444302728	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGGTTTCCTTTTTCCCT	-3	True	NA	24	True	AATAAA	-24	NA	30231530	30260033	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_30231765_30234404_30234508_30256701_30256804_30257432
H1_mix_00054493	chr2	+	5055	7	NIC	ENSG00000172954.14	novel	5060	7	NA	NA	-2	0	combination_of_known_junctions	TRUE	canonical	3	19	junction_1	52.757305971148	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTGTTACGTTCTGTT	5	True	NA	NA	False	AATAAA	-21	NA	30447240	30644225	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_30447384_30459551_30459723_30525586_30525756_30533115_30533315_30562145_30562293_30568059_30568177_30640116
H1_mix_00054494	chr2	+	4761	13	FSM	ENSG00000152683.14	ENST00000435660.5	4776	13	15	0	-8	0	multi-exon	FALSE	canonical	3	15	junction_12	36.1435217800738	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATCTTTCTTTATTCAG	8	False	NA	39	True	ATTAAA	-32	NA	32165855	32224112	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_32165904_32171286_32171374_32174062_32174148_32175318_32175362_32184272_32184339_32192335_32192417_32192917_32192954_32193888_32193984_32197343_32197393_32197706_32197827_32204589_32204693_32206885_32206934_32220212
H1_mix_00054496	chr2	+	5051	14	NNC	ENSG00000152683.14	novel	5089	14	NA	NA	15	-11	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	33.7225013987948	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGAGTTTCCTCTCTGGT	15	False	NA	15	True	ATTAAA	-22	NA	32165896	32224088	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_32166190_32171286_32171374_32174062_32174148_32175318_32175362_32184272_32184339_32192335_32192417_32192917_32192954_32193888_32193984_32197343_32197393_32197706_32197827_32204589_32204693_32206885_32206934_32209492_32209562_32220212
H1_mix_00054497	chr2	+	717	1	FSM	ENSG00000229816.1	ENST00000438163.1	2400	1	1845	-162	1845	162	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCTACTTACCAGTTATA	NA	False	NA	NA	False	AAAAAG	-25	NA	32203444	32204161	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_32203400_32204200
H1_mix_00054498	chr2	+	15695	74	NNC	ENSG00000115760.15	novel	15687	74	NA	NA	40	-19	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_13	36.9458987851507	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATAAAGACTTAGGTGA	-1	True	NA	-14	True	NA	NA	NA	32357062	32618857	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_32357487_32377587_32377770_32380152_32380291_32388749_32388944_32392038_32392151_32395510_32395594_32401162_32401386_32401462_32401624_32406498_32406558_32414768_32416164_32429145_32429296_32430864_32431091_32433643_32433805_32435453_32435586_32436052_32436185_32439507_32439687_32441328_32441463_32442064_32442227_32442323_32442456_32443490_32443589_32445520_32445669_32448794_32448929_32453807_32453943_32463193_32463382_32464508_32464824_32465064_32465165_32467524_32467740_32467902_32468112_32468436_32468784_32469394_32469615_32470167_32470302_32471013_32471152_32473111_32473240_32476212_32476345_32477367_32477584_32478634_32478819_32479461_32479618_32481319_32481454_32482428_32482583_32485642_32485760_32487646_32487802_32488587_32488715_32490040_32490152_32491424_32491559_32493539_32493668_32499546_32500110_32501712_32501889_32502794_32502892_32503041_32503237_32505004_32505206_32507979_32508260_32509737_32509995_32510525_32510635_32512932_32513155_32514989_32515771_32518253_32518398_32518816_32518947_32524887_32525020_32525463_32525629_32529650_32529825_32531354_32531552_32543240_32543542_32545642_32545861_32547849_32548015_32549312_32549482_32575155_32575367_32593914_32594061_32595033_32595145_32597750_32597969_32599738_32599901_32603005_32603084_32607454_32607644_32611447_32611583_32617724
H1_mix_00054499	chr2	+	15692	74	NIC	ENSG00000115760.15	novel	15687	74	NA	NA	40	6	combination_of_known_junctions	FALSE	canonical	3	3	junction_23	37.1631136521923	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGTTTCTAAACCCCT	-1	True	NA	13	True	AATAAA	-23	NA	32357062	32618884	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_32357487_32377587_32377770_32380152_32380291_32388749_32388944_32392038_32392151_32395510_32395594_32401162_32401386_32401462_32401624_32406498_32406558_32414768_32416164_32429145_32429296_32430864_32431091_32433643_32433805_32435495_32435586_32436052_32436185_32439507_32439687_32441328_32441463_32442064_32442227_32442323_32442456_32443490_32443589_32445520_32445669_32448794_32448929_32453807_32453955_32463193_32463382_32464508_32464824_32465064_32465165_32467524_32467740_32467902_32468112_32468436_32468784_32469394_32469615_32470167_32470302_32471013_32471152_32473111_32473240_32476212_32476345_32477367_32477584_32478634_32478819_32479461_32479618_32481319_32481454_32482428_32482583_32485642_32485760_32487646_32487802_32488587_32488715_32490040_32490152_32491424_32491559_32493539_32493668_32499546_32500110_32501712_32501889_32502794_32502892_32503041_32503237_32505004_32505206_32507979_32508260_32509737_32509995_32510525_32510635_32512932_32513155_32514989_32515771_32518253_32518398_32518816_32518947_32524887_32525020_32525463_32525629_32529650_32529825_32531354_32531552_32543240_32543542_32545642_32545861_32547849_32548015_32549312_32549482_32575155_32575367_32593914_32594061_32595033_32595145_32597750_32597969_32599738_32599901_32603005_32603084_32607454_32607644_32611447_32611583_32617724
H1_mix_00054500	chr2	+	1343	1	FSM	ENSG00000276334.1	ENST00000610331.1	1621	1	282	-4	282	4	mono-exon	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTATGTGTATAAAATT	NA	False	NA	NA	False	AGTAAA	-21	NA	32522208	32523551	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_32522200_32523600
H1_mix_00054501	chr2	+	2795	19	NIC	ENSG00000018699.13	novel	2888	20	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	1	13	junction_13	36.1067091334068	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTGGTTTTGTGATGT	0	True	NA	10	True	AATAAA	-18	NA	32628043	32821051	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_32628381_32630522_32630701_32633875_32634006_32640269_32640411_32650130_32650234_32664302_32664468_32666634_32666769_32672271_32672385_32678855_32678923_32702806_32702921_32733827_32733924_32736693_32736817_32758291_32758520_32782625_32782679_32786983_32787150_32811023_32811222_32812503_32812616_32817456_32817558_32820815
H1_mix_00054505	chr2	+	563	6	FSM	ENSG00000057935.14	ENST00000484780.5	563	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	764.191756040328	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTATGAGTATGGCATT	0	True	NA	NA	False	NA	NA	NA	42568110	42656302	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_42568227_42570436_42570505_42579106_42579201_42640172_42640237_42644126_42644245_42656199
H1_mix_00054508	chr2	+	8334	26	NIC	ENSG00000152527.14	novel	6994	30	NA	NA	284	0	intron_retention	FALSE	canonical	2	5	junction_7	10.8517279730004	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGCATTATCTTTTGA	NA	False	NA	9	True	AATAAA	-17	NA	43692513	43767987	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_43692664_43694430_43694515_43695142_43695225_43697170_43697357_43699646_43700609_43703980_43704057_43706321_43706417_43707400_43707546_43709989_43710127_43710219_43710331_43710488_43712384_43720668_43720750_43726271_43726452_43729636_43729746_43731489_43731603_43738340_43738521_43740945_43741044_43742740_43742919_43743833_43743990_43745865_43745964_43753618_43753761_43757118_43757265_43758899_43759030_43762303_43762391_43764227_43764366_43765412
H1_mix_00054511	chr2	+	431	4	FSM	ENSG00000116016.14	ENST00000463191.1	559	4	128	0	128	0	multi-exon	FALSE	canonical	2	2	junction_2	0.816496580927726	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACAGCATGGACATGAAGT	NA	False	NA	NA	False	NA	NA	NA	46356242	46361051	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_46356303_46356723_46356809_46360637_46360757_46360884
H1_mix_00054513	chr2	+	714	3	FSM	ENSG00000119888.11	ENST00000474691.1	714	3	0	0	0	0	multi-exon	FALSE	canonical	3	2531	junction_1	31	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACACAAAGCAAGAGAAAAAC	0	True	NA	6	True	ACTAAA	-1	NA	47369474	47375254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_47369582_47373462_47374049_47375233
H1_mix_00054514	chr2	+	3965	10	FSM	ENSG00000116062.18	ENST00000673637.1	3959	10	-6	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	471.803029627229	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATTATGATCTAATAAAC	-8	True	NA	-18	True	NA	NA	NA	47783144	47806915	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_47783232_47790926_47791124_47795893_47796064_47798610_47801156_47803419_47803686_47804909_47805028_47805617_47805708_47806203_47806359_47806451_47806652_47806778
H1_mix_00054515	chr2	+	3118	21	FSM	ENSG00000162869.16	ENST00000281394.8	3137	21	19	0	19	0	multi-exon	FALSE	canonical	1	1	junction_17	29.5084309986146	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCAGTCTCTCTATTAAA	-13	True	NA	8	True	AATAAA	-18	NA	48440787	48515386	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_48441011_48451007_48451077_48454594_48454742_48458125_48458228_48459753_48459919_48460094_48460154_48461137_48461233_48464936_48464990_48465492_48465643_48471086_48471189_48471278_48471368_48474682_48474820_48479923_48480017_48486630_48486759_48491017_48491171_48495678_48495772_48498492_48498736_48507268_48507386_48510014_48510114_48511339_48511469_48514714
H1_mix_00054516	chr2	+	3200	22	NNC	ENSG00000162869.16	novel	3208	22	NA	NA	45	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	33.0683343884905	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCAGTCTCTCTATTAA	13	True	NA	7	True	AATAAA	-17	NA	48440813	48515385	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_48441011_48451007_48451077_48454555_48454742_48458125_48458228_48459716_48459919_48460094_48460154_48461137_48461233_48464936_48464990_48465492_48465643_48471086_48471189_48471278_48471368_48474682_48474820_48479923_48480017_48486630_48486759_48491017_48491171_48495678_48495772_48498492_48498736_48505563_48505597_48507268_48507386_48510014_48510114_48511339_48511469_48514714
H1_mix_00054517	chr2	+	1059	4	FSM	ENSG00000162869.16	ENST00000476199.1	1075	4	16	0	16	0	multi-exon	FALSE	canonical	3	115	junction_1	12.0277457017791	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCAGTCTCTCTATTAAA	NA	False	NA	8	True	AATAAA	-18	NA	48507226	48515386	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_48507386_48510014_48510114_48511339_48511469_48514714
H1_mix_00054518	chr2	+	2054	4	NNC	ENSG00000143942.5	novel	1309	3	NA	NA	2	2018	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	70.8111730041398	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTTCACTTCCTTATCA	-11	True	NA	NA	False	NA	NA	NA	53767805	53777214	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_53768022_53771906_53771943_53774141_53775534_53776804
H1_mix_00054519	chr2	+	619	5	FSM	ENSG00000170634.13	ENST00000422521.2	1115	5	0	496	0	-496	multi-exon	TRUE	canonical	0	0	junction_4	31.9873021682042	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGAGCTGAGGCTTCAT	-7	True	NA	NA	False	NA	NA	NA	53971107	54065551	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_53971322_53973712_53973811_54050957_54051051_54057238_54057361_54065459
H1_mix_00054524	chr2	+	519	2	FSM	ENSG00000163001.12	ENST00000481791.1	519	2	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGCCTTTTAGTTTCGAA	NA	False	NA	17	True	AATAAA	-17	NA	55544019	55545075	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_55544370_55544906
H1_mix_00054525	chr2	+	2009	13	NIC	ENSG00000028116.18	novel	1773	13	NA	NA	-305	-406	combination_of_known_splicesites	FALSE	canonical	3	28	junction_1	73.1761573191706	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTCTCAAGAACCTTTGAA	1029	False	NA	NA	False	NA	NA	NA	58046336	58159378	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_58047129_58048826_58048968_58084088_58084139_58084880_58084951_58086338_58086427_58088340_58088447_58089630_58089724_58123100_58123234_58131807_58131929_58135140_58135200_58139665_58139833_58146315_58146475_58159348
H1_mix_00054526	chr2	+	2140	9	NIC	ENSG00000028116.18	novel	1870	14	NA	NA	11	-26687	combination_of_known_junctions	FALSE	canonical	3	65	junction_1	76.0772633577208	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTAATTCTAATGATTA	-16	True	NA	5	True	AATAAA	-27	NA	58046652	58133097	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_58046822_58048826_58048968_58084088_58084139_58084880_58084951_58086338_58086427_58088340_58088447_58089630_58089724_58123100_58123234_58131807
H1_mix_00054527	chr2	+	2936	9	ISM	ENSG00000028116.18	ENST00000340157.9	1773	13	-39	25911	-39	-25824	5prime_fragment	FALSE	canonical	3	213	junction_1	37.0877338213054	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGTAATTCCATCTTGT	9	False	NA	NA	False	CATAAA	-28	NA	58046766	58133960	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_58046869_58048826_58048968_58084088_58084139_58084880_58084951_58086338_58086427_58088340_58088447_58089630_58089724_58123100_58123234_58131807
H1_mix_00054528	chr2	+	338	1	FSM	ENSG00000273063.1	ENST00000608934.1	338	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTAGCACTCTGTCTTC	NA	False	NA	5	True	AATAAA	-20	NA	58241348	58241686	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_58241300_58241700
H1_mix_00054529	chr2	+	1651	3	FSM	ENSG00000233723.10	ENST00000663407.1	1639	3	-12	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	13	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAGTGGTACTAATATA	3	True	NA	NA	False	AATAAA	-22	NA	58428372	58697130	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_58428465_58656649_58656712_58695633
H1_mix_00054530	chr2	+	445	1	FSM	ENSG00000213495.3	ENST00000424037.1	437	1	-8	0	-8	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATCTTTTTTATTTTCT	NA	False	NA	NA	False	AATACA	-33	NA	60711475	60711920	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_60711500_60711900
H1_mix_00054531	chr2	+	1591	2	NNC	ENSG00000162928.9	novel	1533	2	NA	NA	6	3443	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	0	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCAATGAACTTTGATTA	15	True	NA	87	True	NA	NA	NA	61017735	61022524	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_61017852_61021049
H1_mix_00054533	chr2	+	3327	6	NIC	ENSG00000173209.23	novel	2813	7	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	41	junction_2	161.679930727348	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATGTAAAGCATTGTTT	-24	True	NA	8	True	TTTAAA	-45	NA	61177424	61186909	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_61179172_61181319_61181406_61183546_61183663_61184711_61184801_61185501_61186498_61186616
H1_mix_00054534	chr2	+	927	7	NIC	ENSG00000173209.23	novel	2437	7	NA	NA	48	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	140.477064161932	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATACAATGTAAAGCATTG	76	False	NA	5	True	TTTAAA	-42	NA	61177586	61186906	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_61177689_61178980_61179172_61181319_61181406_61184711_61184801_61185501_61185619_61186445_61186498_61186616
H1_mix_00054535	chr2	+	2595	6	FSM	ENSG00000173209.23	ENST00000647519.1	2595	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	142.725470747166	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAGCAATCAATCAATCAG	417	False	NA	-49	True	AATGAA	-34	NA	61177927	61187499	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_61179172_61181319_61181406_61184711_61184925_61185501_61185619_61186445_61186498_61186616
H1_mix_00054536	chr2	+	1578	3	FSM	ENSG00000270820.7	ENST00000603652.2	1738	3	160	0	-2	0	multi-exon	FALSE	canonical	0	0	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAGAACATCTTTTATT	20	True	NA	NA	False	NA	NA	NA	61471347	61483913	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_61471380_61480324_61480584_61482626
H1_mix_00054540	chr2	+	5587	6	NNC	ENSG00000225889.10	novel	1423	5	NA	NA	-5	7286	intron_retention	FALSE	canonical	3	16	junction_3	38.876213807417	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAAGTGAATGGTGGTCT	NA	False	NA	NA	False	NA	NA	NA	64228384	64264896	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_64228523_64229496_64229641_64251118_64251835_64252419_64255082_64260227_64260350_64263091
H1_mix_00054542	chr2	+	4701	5	NNC	ENSG00000225889.10	novel	1372	5	NA	NA	6	0	intron_retention	FALSE	canonical	1	1	junction_1	22.642603648874	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	62	False	NA	16	True	ATTAAA	-21	NA	64228530	64257610	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_64229289_64229496_64229641_64251118_64251835_64252419_64255082_64257189
H1_mix_00054543	chr2	+	4102	10	FSM	ENSG00000119844.16	ENST00000238855.11	4113	10	11	0	11	0	multi-exon	FALSE	canonical	1	2	junction_8	40.5319566042998	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAATTTAGCCTGGTG	-3	True	NA	NA	False	AATAAA	-8	NA	64524315	64592997	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_64524613_64551442_64553410_64567561_64567714_64569091_64569219_64569622_64569680_64572945_64573069_64579485_64579547_64581189_64581274_64585421_64585546_64591887
H1_mix_00054544	chr2	+	1739	5	ISM	ENSG00000143971.9	ENST00000644028.1	2946	6	1015	1689	1003	-1689	3prime_fragment	FALSE	canonical	2	7	junction_3	71.9769928518829	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGTTAGTAGAGACTGTT	9	False	NA	23	True	AATAAA	-14	NA	67398338	67410400	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_67399298_67399549_67399627_67402861_67402975_67405235_67405336_67409910
H1_mix_00054545	chr2	+	994	1	FSM	ENSG00000273064.1	ENST00000608069.1	979	1	-23	8	-23	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTAGGACTAAATGGTTCC	1245	False	NA	NA	False	AATAAA	-15	NA	68252846	68253840	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_68252800_68253800
H1_mix_00054546	chr2	+	1126	13	FSM	ENSG00000169604.21	ENST00000482235.2	1126	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_12	31.4124665627447	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGGATGATTTGTGCT	77	False	NA	NA	False	TATAAA	-17	NA	69013499	69135169	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_69013652_69040043_69040116_69044741_69044814_69070646_69070729_69071753_69071788_69073021_69073102_69075589_69075659_69077407_69077489_69090858_69090920_69102841_69102941_69123016_69123087_69124564_69124644_69134994
H1_mix_00054547	chr2	+	521	2	FSM	ENSG00000196975.16	ENST00000468815.1	521	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCTGTCACTCAGTGCAT	1532	False	NA	NA	False	NA	NA	NA	69807977	69810902	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_69808190_69810593
H1_mix_00054548	chr2	+	422	1	FSM	ENSG00000225392.1	ENST00000429424.1	312	1	61	-171	61	171	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATTATCTTATTTCCAAA	93	False	NA	NA	False	NA	NA	NA	70102611	70103033	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_70102600_70103000
H1_mix_00054549	chr2	+	2483	3	FSM	ENSG00000124357.13	ENST00000490998.5	2483	3	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_1	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGGACTGCATTATCAAA	2306	False	NA	20	True	AATAAA	-20	NA	71074619	71078639	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_71076702_71077557_71077637_71078317
H1_mix_00054551	chr2	+	1376	2	FSM	ENSG00000124383.9	ENST00000493360.1	1584	2	208	0	208	0	multi-exon	FALSE	canonical	3	334	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGCATCGATGACAGATA	NA	False	NA	16	True	AATAAA	-17	NA	71148313	71150101	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_71149454_71149865
H1_mix_00054552	chr2	+	305	1	FSM	ENSG00000233870.1	ENST00000437460.1	187	1	12	-130	12	130	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTGGACTGCATTATCAA	NA	False	NA	NA	False	AATAAA	-19	NA	71178598	71178903	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_71178600_71178900
H1_mix_00054553	chr2	+	2358	6	ISM	ENSG00000075292.19	ENST00000410075.5	3518	13	0	29965	0	0	5prime_fragment	FALSE	canonical	3	144	junction_1	140.073694889512	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAATTCTTTAATTAATAA	7	True	NA	NA	False	GATAAA	-21	NA	71276592	71365705	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_71276755_71348752_71350272_71355718_71355781_71363152_71363192_71363953_71364253_71365428
H1_mix_00054554	chr2	+	5028	27	NIC	ENSG00000075292.19	novel	4233	18	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_1	125.17055819582	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTGTGTTTGTGGCTGA	12	True	NA	NA	False	AATAAA	-25	NA	71276597	71435058	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_71276755_71355718_71355781_71363152_71363192_71363953_71364253_71365428_71365707_71368381_71368529_71369882_71370006_71380221_71380281_71380512_71380566_71396140_71396192_71398700_71398773_71399558_71399646_71400111_71400181_71400477_71400519_71401955_71402088_71403869_71403999_71405600_71405643_71406127_71406263_71408121_71408248_71418601_71418640_71422813_71424039_71424649_71424716_71426459_71427415_71428546_71428652_71431326_71431429_71433164_71433284_71434741
H1_mix_00054558	chr2	+	2907	1	FSM	ENSG00000135638.14	ENST00000616281.1	2900	1	589	-596	589	596	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCTTCTGTGAGCCTGA	NA	False	NA	-18	True	NA	NA	NA	72933760	72936667	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_72933800_72936700
H1_mix_00054559	chr2	+	613	1	FSM	ENSG00000272702.1	ENST00000610134.1	2744	1	-148	2279	-2	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCAATATTTAAGTGTTCA	11	True	NA	3	True	AATAAA	-11	NA	73113015	73113628	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73113000_73113600
H1_mix_00054560	chr2	+	1183	3	FSM	ENSG00000214513.4	ENST00000398468.4	2433	3	0	1250	0	-1250	multi-exon	FALSE	canonical	0	0	junction_2	1	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGTTACTGTTAAGGCT	-1	True	NA	NA	False	NA	NA	NA	73202573	73211263	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73203049_73208399_73208615_73210770
H1_mix_00054561	chr2	+	790	8	FSM	ENSG00000135632.12	ENST00000258100.8	786	8	-4	0	-4	0	multi-exon	FALSE	canonical	3	15	junction_2	86.7885067158042	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAGAATGTTCCAGAGCTA	NA	False	NA	NA	False	NA	NA	NA	73214233	73223106	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73214363_73218860_73218970_73220069_73220191_73220660_73220783_73221164_73221235_73221825_73221931_73222754_73222818_73223035
H1_mix_00054563	chr2	+	12806	23	FSM	ENSG00000116127.20	ENST00000613296.6	12844	23	38	0	5	0	multi-exon	FALSE	canonical	0	0	junction_1	36.9501842444998	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATAGTAAACAATTCTTT	36	False	NA	56	True	AATAAA	-14	NA	73385873	73609916	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73386193_73408621_73408748_73419122_73419319_73422856_73422975_73424429_73424903_73426452_73426554_73432197_73432292_73447959_73454068_73455161_73455296_73489633_73491499_73519774_73520017_73534823_73534950_73550266_73550438_73557219_73557355_73558971_73559143_73572261_73573425_73599400_73599522_73600677_73600882_73601194_73601437_73602184_73602369_73603240_73603305_73608474_73608575_73609567
H1_mix_00054565	chr2	+	3853	3	NNC	ENSG00000230002.3	novel	2105	2	NA	NA	-3845	-2	intron_retention	FALSE	canonical	0	0	junction_2	33	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCCATCATTGCTTCAAC	4810	False	NA	NA	False	AATAAA	-27	NA	73452918	73459480	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_73454068_73455161_73455296_73456910
H1_mix_00054566	chr2	+	2077	2	FSM	ENSG00000230002.3	ENST00000441587.3	2105	2	28	0	28	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCATCATTGCTTCAACAT	8683	False	NA	NA	False	AATAAA	-29	NA	73456791	73459482	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73457327_73457940
H1_mix_00054568	chr2	+	7834	9	FSM	ENSG00000124356.17	ENST00000682683.1	7846	9	12	0	9	0	multi-exon	FALSE	canonical	3	52	junction_1	112.378197952272	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	-22	True	NA	3	True	AATAAA	-16	NA	73828951	73867152	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73828997_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
H1_mix_00054569	chr2	+	1678	11	FSM	ENSG00000124356.17	ENST00000409707.6	1668	11	-10	0	9	0	multi-exon	FALSE	canonical	0	0	junction_10	147.079604296449	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGAATATTCCTTTTTCT	-22	True	NA	NA	False	ATTAAA	-18	NA	73828951	73873652	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73828997_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202_73862305_73873351
H1_mix_00054570	chr2	+	7988	10	FSM	ENSG00000124356.17	ENST00000683027.1	7979	10	-9	0	0	0	multi-exon	FALSE	canonical	3	187	junction_1	72.0865392136595	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	4	True	NA	3	True	AATAAA	-16	NA	73828977	73867152	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73829071_73829404_73829511_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
H1_mix_00054571	chr2	+	6273	10	FSM	ENSG00000124356.17	ENST00000682351.1	6261	10	-12	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	112.631925391001	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	4	True	NA	3	True	AATAAA	-16	NA	73828977	73867152	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_73829071_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
H1_mix_00054572	chr2	+	6421	12	NNC	ENSG00000124356.17	novel	6559	12	NA	NA	0	30307	intron_retention	FALSE	non_canonical	0	0	junction_11	122.676420441059	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCACATAATAGAGGCC	4	True	NA	NA	False	AAAACA	-6	NA	73828977	73903966	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_73829071_73829404_73829511_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202_73867168_73903939
H1_mix_00054574	chr2	+	12213	13	NNC	ENSG00000187605.16	novel	12060	12	NA	NA	-214	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	4.83835945566493	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGTGTGGGTTCTCTTTT	590	False	NA	39	True	AATAAA	-27	NA	73984695	74108176	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_73985158_73985979_73986707_74003109_74003167_74046277_74048412_74073548_74073640_74080497_74080592_74087829_74088039_74089896_74090048_74092901_74092992_74093528_74093667_74099275_74099613_74100392_74102406_74102466
H1_mix_00054576	chr2	+	2872	8	NIC	ENSG00000274049.4	novel	2040	8	NA	NA	-22	-1	combination_of_known_splicesites	FALSE	canonical	3	72	junction_1	256.982330846591	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTGGATTTGGGTGGA	NA	False	NA	16	True	ATTAAA	-16	NA	74455065	74460883	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_74455175_74455405_74455599_74455817_74455937_74456102_74456273_74457333_74458672_74459642_74459746_74459872_74460050_74460220
H1_mix_00054578	chr2	+	2958	13	NIC	ENSG00000115282.21	novel	2916	13	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_8	40.9582273650715	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCCTACATAGTCATGCT	20	False	NA	10	True	AATAAA	-18	NA	74483098	74494559	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_74483136_74483321_74483411_74490024_74490128_74490243_74490474_74490655_74490740_74491127_74491185_74491294_74491376_74491480_74491673_74491943_74492056_74492138_74492230_74492303_74492446_74492645_74492748_74492921
H1_mix_00054580	chr2	+	1733	4	FSM	ENSG00000115325.14	ENST00000340004.6	1722	4	-11	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	30.2140511829991	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATGTGTGTGAAGAGAA	-17	True	NA	27	True	ATTAAA	-20	NA	74554719	74557551	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_74554815_74555153_74555454_74555574_74555669_74556307
H1_mix_00054581	chr2	+	524	4	FSM	ENSG00000115350.12	ENST00000465242.5	528	4	4	0	4	0	multi-exon	FALSE	canonical	3	20	junction_1	158.410858213697	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACCTCAGTCCAGTGTGT	354	False	NA	3	True	AATAAA	-10	NA	74959009	74969723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_74959092_74959340_74959426_74960104_74960147_74969408
H1_mix_00054582	chr2	+	963	1	Intergenic	novelGene_698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTACCCTGTAGCATTC	NA	False	NA	NA	False	AATAAA	-29	NA	76573769	76574732	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_76573800_76574700
H1_mix_00054583	chr2	+	6649	3	Antisense	novelGene_ENSG00000176204.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	59	junction_2	29.5	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGTATTTTTTGTGAGT	NA	False	NA	13	True	AATAAA	-25	NA	77088569	77099887	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_+_77088823_77090732_77090901_77093659
H1_mix_00054584	chr2	+	729	2	ISM	ENSG00000034510.6	ENST00000233143.6	461	3	3	0	3	0	intron_retention	FALSE	canonical	3	22215	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGCGTGGTCTGAGTC	4	True	NA	19	True	AATAAA	-16	NA	84905658	84906671	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_84905719_84906002
H1_mix_00054585	chr2	+	4761	12	FSM	ENSG00000115459.18	ENST00000446464.7	4761	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	20.4454525243542	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCGTCTCAGGTGTTTT	-17	True	NA	10	True	AATAAA	-14	NA	85354745	85391748	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_85354830_85355075_85357253_85362185_85362261_85363096_85363167_85368685_85368755_85369738_85369831_85371085_85371210_85371439_85371563_85377343_85377475_85387097_85387226_85389750_85389828_85390137
H1_mix_00054586	chr2	+	2253	13	NIC	ENSG00000115459.18	novel	2364	14	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	13.8774397254441	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCTCAGGTGTTTTTTTC	26	False	NA	14	True	AATAAA	-18	NA	85354788	85391752	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_85354830_85355554_85355599_85356966_85357253_85362185_85362261_85363096_85363167_85368685_85368755_85369738_85369831_85371085_85371210_85371439_85371563_85377343_85377475_85389750_85389828_85390137_85390266_85390759
H1_mix_00054588	chr2	+	635	3	NNC	ENSG00000168899.5	novel	564	2	NA	NA	-160	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	6	185	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGGTCCCCAGGTTGG	4546	False	NA	24	True	ATTAAA	-15	NA	85584270	85593406	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_85584307_85591724_85591865_85592947
H1_mix_00054590	chr2	+	2017	12	FSM	ENSG00000168883.20	ENST00000450066.6	2086	12	69	0	50	0	multi-exon	FALSE	canonical	1	3	junction_2	319.697144908756	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCTTGTTTTATATCTT	27	False	NA	73	True	ATTAAA	-21	NA	85612171	85649282	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_85612360_85619219_85619290_85623625_85623783_85625538_85625692_85630720_85630947_85636052_85636131_85637368_85637437_85639202_85639392_85640975_85641119_85644947_85645084_85647929_85648017_85648760
H1_mix_00054591	chr2	+	1479	1	FSM	ENSG00000273080.1	ENST00000610262.1	460	1	-428	-591	-428	591	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGCATGGTATTAATACT	1	True	NA	0	True	AATAAA	-13	NA	86195161	86196640	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_86195200_86196600
H1_mix_00054592	chr2	+	4682	27	NNC	ENSG00000115548.17	novel	4928	27	NA	NA	0	10127	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	24.6641644074386	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGACACAGACTTTAACACC	5	True	NA	NA	False	AAAAAG	-10	NA	86441378	86502843	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_86441445_86442017_86442234_86449806_86449963_86451102_86451214_86455084_86455188_86456441_86456567_86456804_86456878_86456982_86457072_86464052_86464217_86466371_86466884_86470203_86470409_86474775_86474991_86477876_86478030_86478169_86478266_86478607_86478736_86480166_86480363_86481929_86482103_86482457_86482695_86483986_86484159_86484941_86485030_86485728_86485860_86489317_86489438_86489519_86489660_86490880_86491058_86491140_86491276_86492038_86492715_86502818
H1_mix_00054593	chr2	+	4485	3	FSM	ENSG00000115548.17	ENST00000491383.5	4485	3	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_2	9.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCTCAGTTTATTGGC	6705	False	NA	15	True	ATTAAA	-15	NA	86486927	86492716	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_86489660_86490880_86491058_86491140
H1_mix_00054595	chr2	+	6448	20	ISM	ENSG00000187627.17	ENST00000641458.2	6819	23	11389	-6	11389	6	3prime_fragment	FALSE	canonical	3	44	junction_5	44.1781836584229	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAATCATTTAAAAAATTG	NA	False	NA	NA	False	ATTAAA	-21	NA	86953506	87013982	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_86953651_86957705_86957937_86958281_86958428_86963028_86963225_86969227_86969316_86971746_86971957_86974072_86974255_86974337_86974514_86974680_86974805_86975727_86975887_86976152_86976291_86976552_86976700_86977579_86977760_86977847_86977932_86981082_86981201_86984753_86984849_86985575_86987800_86994840_86994981_86997562_86997759_87012512
H1_mix_00054598	chr2	+	483	3	FSM	ENSG00000222041.12	ENST00000409139.6	1394	3	0	911	0	30	multi-exon	FALSE	canonical	2	2	junction_2	7.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTTTCTAAGTTTTCT	-1	True	NA	NA	False	AAGAAA	-28	NA	87455428	87606769	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_87455646_87583257_87583347_87606592
H1_mix_00054599	chr2	+	254	3	ISM	ENSG00000234231.4	ENST00000427434.2	2070	15	4902	24727	4902	-24727	internal_fragment	FALSE	canonical	3	11	junction_2	47.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGATGAGAGCTCAGTTT	NA	False	NA	NA	False	NA	NA	NA	87705885	87713378	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_87705971_87707761_87707911_87713358
H1_mix_00054600	chr2	+	436	1	FSM	ENSG00000229604.2	ENST00000435212.2	202	1	11	-245	11	245	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCCGCCCGGCCAGGCCG	12	False	NA	NA	False	NA	NA	NA	87824952	87825388	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_87825000_87825400
H1_mix_00054602	chr2	+	209	2	FSM	ENSG00000224291.1	ENST00000451912.1	203	2	-6	0	-6	0	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAACCATACACACTGAT	NA	False	NA	NA	False	NA	NA	NA	88428071	88428615	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_88428163_88428497
H1_mix_00054603	chr2	+	359	1	FSM	ENSG00000233158.1	ENST00000452670.1	400	1	76	-35	76	35	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGGATTTTTCATGAGAT	NA	False	NA	NA	False	AGTAAA	-29	NA	94912507	94912866	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_94912500_94912900
H1_mix_00054604	chr2	+	1041	7	NIC	ENSG00000115042.10	novel	4775	8	NA	NA	0	37	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	122.51938622112	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTTCTGCTGTTTGTCT	-22	True	NA	14	True	AATAAA	-23	NA	95402707	95413133	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_95402873_95406940_95407158_95410526_95410587_95410863_95411027_95412433_95412543_95412676_95412765_95412894
H1_mix_00054605	chr2	+	1317	6	FSM	ENSG00000231584.9	ENST00000686766.1	1330	6	-10	23	0	-23	multi-exon	FALSE	canonical	3	28	junction_1	62.6309827481575	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCGTCGGGTCAAAGCA	-5	True	NA	-18	True	NA	NA	NA	96010553	96021811	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_96010733_96015108_96015326_96019200_96019701_96021124_96021234_96021367_96021466_96021597
H1_mix_00054610	chr2	+	2645	18	NIC	ENSG00000121152.10	novel	6030	18	NA	NA	11	28	combination_of_known_junctions	FALSE	canonical	3	22	junction_13	61.7406675911597	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAGTGTCCACTAGAT	-6	True	NA	17	True	AATAAA	-26	NA	96335776	96373843	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_96335849_96341674_96341895_96342049_96342141_96342755_96342849_96343165_96343305_96344104_96344230_96351830_96352021_96353305_96353398_96354182_96354389_96359044_96359194_96360142_96360250_96360587_96360711_96364480_96364592_96365968_96366059_96367256_96367374_96368971_96369064_96369424_96369501_96373291
H1_mix_00054611	chr2	+	2363	17	FSM	ENSG00000121152.10	ENST00000427946.5	2363	17	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	59.6683542591883	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATTTTCCAGTGGGCAC	13	True	NA	NA	False	NA	NA	NA	96335795	96373707	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_96335849_96342049_96342141_96342755_96342849_96343165_96343305_96344104_96344230_96351830_96352021_96353305_96353398_96354182_96354389_96359044_96359194_96360142_96360250_96360587_96360711_96364480_96364592_96365875_96366059_96367256_96367374_96368971_96369064_96369424_96369501_96373291
H1_mix_00054612	chr2	+	3993	7	NIC	ENSG00000168763.16	novel	4900	8	NA	NA	-1015	-6	intron_retention	TRUE	canonical	3	9	junction_5	94.1258023427512	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGAACATTTCAAGTCTTT	NA	False	NA	37	True	AAAAAG	-15	NA	96815229	96833571	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_96817503_96825057_96825202_96826832_96826983_96827730_96827901_96828098_96828196_96828995_96829135_96832551
H1_mix_00054613	chr2	+	1499	2	FSM	ENSG00000286654.1	ENST00000661235.1	1743	2	243	1	221	-1	multi-exon	TRUE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAATAACACTGATCCCGA	NA	False	NA	NA	False	AATAAA	-1	NA	96912791	96917271	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_96913029_96916009
H1_mix_00054614	chr2	+	3902	7	ISM	ENSG00000135976.21	ENST00000652721.1	7623	76	128046	-292	-4336	292	intron_retention	FALSE	canonical	3	48	junction_5	11.6249253283145	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTGATGAAAATTTATAT	244	False	NA	NA	False	ATTAAA	-23	NA	97241263	97252412	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_97241480_97243845_97244030_97245156_97246072_97247475_97247629_97249143_97249215_97249551_97249646_97250143
H1_mix_00054615	chr2	+	3388	24	NNC	ENSG00000040933.16	novel	9996	26	NA	NA	-11	-3746	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_23	73.7136953671982	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTTTTGTCCCGTTTTGTC	-32	True	NA	NA	False	NA	NA	NA	98444842	98578075	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_98445086_98518963_98519026_98519945_98520155_98520686_98520732_98533376_98533496_98535728_98535846_98536128_98536209_98537862_98537975_98538890_98538982_98539527_98539676_98543876_98544008_98545968_98546074_98546585_98546695_98552785_98552970_98554270_98554490_98555552_98555692_98563464_98563638_98564639_98564764_98565639_98565767_98566028_98566170_98568570_98568669_98572814_98572928_98576988_98577144_98577731
H1_mix_00054617	chr2	+	3202	5	FSM	ENSG00000273045.7	ENST00000409684.2	1058	5	-45	-2099	-2	1477	multi-exon	FALSE	canonical	2	6	junction_2	15.1079449297381	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAATCTCCAGGTTGAGGT	-17	True	NA	NA	False	NA	NA	NA	99141704	99153146	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_99141938_99142284_99142402_99147026_99147123_99147401_99147494_99150482
H1_mix_00054618	chr2	+	1867	3	NIC	ENSG00000144182.17	novel	803	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	8	junction_1	13	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATTGTATGTCAAAAAAAAA	-13	True	NA	21	True	AATAAA	-17	NA	99154984	99163137	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_99155545_99156300_99156427_99161956
H1_mix_00054619	chr2	+	3163	7	NNC	ENSG00000185414.20	novel	4435	6	NA	NA	-93	0	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_6	153.882440699241	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTAGTTTTCCGTATTACC	NA	False	NA	24	True	AATAAA	-20	NA	99181058	99199561	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_99181250_99186176_99186255_99188176_99188258_99194750_99194898_99195115_99195190_99195572_99195757_99197153
H1_mix_00054621	chr2	+	473	5	NNC	ENSG00000071082.11	novel	1291	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	595	junction_3	4706.80440293624	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCATGTTTTTGTTCTTTT	-1	True	NA	26	True	AATAAA	-14	NA	101002282	101006418	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_101002316_101002701_101002809_101004157_101004309_101005958_101006072_101006349
H1_mix_00054622	chr2	+	2621	8	NNC	ENSG00000158435.8	novel	2515	7	NA	NA	0	17115	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	241.878195016603	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGGAAAAGTCAAAAGCCC	-11	True	NA	NA	False	AATAAA	-15	NA	101252885	101287431	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_101253479_101257790_101257956_101262538_101262692_101264844_101265048_101266676_101266880_101269039_101269137_101269215_101270316_101287324
H1_mix_00054623	chr2	+	7860	30	NIC	ENSG00000071054.17	novel	3861	31	NA	NA	-349	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_15	78.4043909081258	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTTATGTGGCATGAGT	5	True	NA	8	True	AATAAA	-14	NA	101697357	101894687	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_101698138_101698472_101698539_101790719_101790777_101823927_101824054_101825318_101825430_101829503_101829595_101831720_101831852_101834408_101834464_101835899_101835979_101839818_101839995_101842608_101842682_101844100_101844312_101855976_101856139_101858995_101859083_101859735_101859865_101863820_101864052_101864929_101865037_101866427_101866580_101867211_101867310_101869621_101869798_101870294_101870416_101873646_101873765_101874081_101874253_101877002_101877147_101882550_101882686_101885186_101885288_101887087_101887238_101887777_101887938_101888795_101888936_101891165
H1_mix_00054624	chr2	+	4410	30	NIC	ENSG00000071054.17	novel	7970	33	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_15	78.3635540999588	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCAGGTGCTATAAGTGT	-1	True	NA	30	True	AATAAA	-38	NA	101697709	101891496	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_101698138_101698472_101698539_101790719_101790777_101823927_101824054_101825318_101825430_101829503_101829595_101831720_101831852_101834408_101834464_101835899_101835979_101839818_101839995_101842608_101842682_101844100_101844312_101855976_101856139_101858995_101859083_101859642_101859865_101863820_101864052_101864929_101865037_101866427_101866580_101867211_101867310_101869621_101869798_101870294_101870416_101873646_101873765_101874081_101874253_101877002_101877147_101882550_101882686_101885186_101885288_101887087_101887238_101887777_101887938_101888795_101888936_101891165
H1_mix_00054625	chr2	+	4314	30	NIC	ENSG00000071054.17	novel	3861	31	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_15	83.0040899813174	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCAGGTGCTATAAGTGT	-1	True	NA	30	True	AATAAA	-38	NA	101697709	101891496	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_101698138_101698472_101698539_101790719_101790777_101823927_101824054_101825318_101825430_101829503_101829595_101831720_101831852_101834408_101834464_101835899_101835979_101839818_101839995_101842608_101842682_101844100_101844312_101855976_101856139_101858995_101859083_101859735_101859865_101863820_101864052_101864929_101865037_101866430_101866580_101867211_101867310_101869621_101869798_101870294_101870416_101873646_101873765_101874081_101874253_101877002_101877147_101882550_101882686_101885186_101885288_101887087_101887238_101887777_101887938_101888795_101888936_101891165
H1_mix_00054626	chr2	+	7279	29	NIC	ENSG00000071054.17	novel	7600	31	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	86	junction_18	59.0879230728346	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTGGCATGAGTTT	-1	True	NA	10	True	AATAAA	-16	NA	101697709	101894689	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_101698138_101698472_101698539_101790719_101790777_101823927_101824054_101825318_101825430_101829503_101829595_101831720_101831852_101834408_101834464_101835899_101835979_101839818_101839995_101842608_101842682_101844100_101844312_101855976_101856139_101858995_101859083_101859735_101859865_101864929_101865037_101866427_101866580_101867211_101867310_101869621_101869798_101870294_101870416_101873646_101873765_101874081_101874253_101877002_101877147_101882550_101882686_101885186_101885288_101887087_101887238_101887777_101887938_101888795_101888936_101891165
H1_mix_00054627	chr2	+	4403	31	NIC	ENSG00000071054.17	novel	7600	31	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_21	90.4051436589755	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCAGGTGCTATAAGTGT	33	False	NA	30	True	AATAAA	-38	NA	101697743	101891496	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_101698138_101698472_101698539_101790719_101790777_101823927_101824054_101825318_101825430_101829503_101829595_101831720_101831852_101834408_101834464_101835899_101835979_101839818_101839995_101842608_101842682_101844100_101844312_101855976_101856139_101858995_101859083_101859735_101859865_101860824_101860987_101864929_101865037_101866430_101866580_101867211_101867310_101869621_101869798_101870294_101870416_101871493_101871686_101873646_101873765_101874081_101874253_101877002_101877147_101882550_101882686_101885186_101885288_101887087_101887238_101887777_101887938_101888795_101888936_101891165
H1_mix_00054628	chr2	+	3109	21	NIC	ENSG00000071054.17	novel	4232	30	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_11	98.079304646801	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCAGGTGCTATAAGTGT	-15	True	NA	30	True	AATAAA	-38	NA	101839840	101891496	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_101839995_101842608_101842682_101844100_101844312_101855976_101856139_101858995_101859083_101859735_101859865_101864929_101865037_101866430_101866580_101867211_101867310_101869621_101869798_101870294_101870416_101871493_101871686_101873646_101873765_101874081_101874253_101877002_101877147_101882550_101882686_101885186_101885288_101887087_101887238_101887777_101887938_101888795_101888936_101891165
H1_mix_00054629	chr2	+	1756	11	FSM	ENSG00000115594.12	ENST00000409288.5	1735	11	-21	0	19	0	multi-exon	TRUE	canonical	1	4	junction_6	2.90516780926679	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCTCTTCAGAAGTGTAT	-8	True	NA	NA	False	NA	NA	NA	102142764	102175759	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_102143021_102153940_102154018_102157718_102157786_102164773_102165009_102165114_102165305_102166112_102166282_102168597_102168664_102171800_102171919_102172686_102172839_102174586_102174731_102175477
H1_mix_00054630	chr2	+	5157	12	FSM	ENSG00000115594.12	ENST00000410023.6	5183	12	19	7	19	1	multi-exon	FALSE	canonical	1	4	junction_6	2.95699199405284	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTTATCCTGAGAATCTG	-8	True	NA	4	True	AATAAA	-16	NA	102142764	102179867	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_102143021_102153940_102154018_102157718_102157786_102164773_102165009_102165114_102165305_102166112_102166282_102168597_102168664_102171800_102171919_102172686_102172839_102174586_102174731_102175477_102175646_102176352
H1_mix_00054631	chr2	+	3574	10	NNC	ENSG00000115604.12	novel	3854	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	3.74165738677394	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATTAATGAACCATTAGT	-3	True	NA	NA	False	CATAAA	-12	NA	102355795	102398758	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_102356139_102356282_102356401_102362632_102362719_102375906_102376064_102381619_102381683_102384877_102384999_102386860_102387001_102390058_102390218_102394468_102394628_102396530
H1_mix_00054632	chr2	+	4149	11	FSM	ENSG00000115604.12	ENST00000233957.7	4149	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	3.38969025133566	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTAATGCCTTTATTTTTG	-3	True	NA	NA	False	CATAAA	-30	NA	102355795	102398776	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_102356401_102362632_102362719_102367824_102368069_102371952_102372119_102375906_102376064_102381619_102381683_102384877_102384999_102386860_102387001_102390055_102390218_102394468_102394628_102396530
H1_mix_00054633	chr2	+	835	5	NIC	ENSG00000170417.16	novel	1025	5	NA	NA	-3	-55	combination_of_known_junctions	FALSE	canonical	2	9	junction_4	10.3198837202751	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTGTTTTTCCAAAAAT	18	False	NA	NA	False	ATTAAA	-18	NA	102736942	102843838	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_102737014_102762586_102762687_102764328_102764428_102797862_102798001_102843411
H1_mix_00054635	chr2	+	490	3	FSM	ENSG00000071051.14	ENST00000522586.5	490	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	72.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCGCCCCGGCCCCACACT	NA	False	NA	NA	False	NA	NA	NA	105816557	105893176	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_105816614_105855050_105855290_105892981
H1_mix_00054636	chr2	+	204	2	ISM	ENSG00000235486.1	ENST00000447760.1	831	6	1352	5894	1352	-5894	internal_fragment	FALSE	canonical	3	134	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGACTCCTTTCTTGCAC	3512	False	NA	NA	False	NA	NA	NA	106371075	106372353	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_106371160_106372233
H1_mix_00054637	chr2	+	235	1	ISM	ENSG00000196862.10	ENST00000408999.4	7212	23	44623	20795	44623	-20795	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGATAACTGTGATTTAAGG	NA	False	NA	NA	False	AATAAA	-36	NA	107871514	107871749	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_107871500_107871700
H1_mix_00054638	chr2	+	2849	7	FSM	ENSG00000198075.10	ENST00000272452.7	2850	7	0	1	0	-1	multi-exon	FALSE	canonical	2	2	junction_3	5.8309518948453	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTGTATTGTCTCTC	-23	True	NA	16	True	ATTAAA	-20	NA	108377953	108388988	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_108378507_108381761_108381888_108382384_108382483_108383092_108383220_108383415_108383511_108386191_108386373_108387319
H1_mix_00054641	chr2	+	11534	30	NNC	ENSG00000153201.16	novel	11708	29	NA	NA	-3	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_20	110.277112843611	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTAAGTGGTACTTTAT	-31	True	NA	33	True	AATAAA	-15	NA	108719478	108785809	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_108719679_108729131_108729200_108730773_108730886_108731321_108731475_108735531_108735763_108736103_108736250_108740488_108740682_108746710_108746799_108748919_108749130_108751263_108751446_108751527_108751704_108751870_108751995_108752997_108753160_108753425_108753564_108753824_108753972_108754904_108755085_108755175_108755260_108758412_108758549_108762100_108762196_108763236_108765437_108765613_108768389_108771700_108771872_108772488_108772582_108772867_108773047_108775731_108775937_108777129_108777232_108781268_108781430_108782127_108782402_108782527_108782863_108783595
H1_mix_00054642	chr2	+	1747	11	NIC	ENSG00000163006.12	novel	2250	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	54.4048711054442	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGTTAAATAATACTGTC	-3	True	NA	NA	False	AATAAA	-20	NA	108786772	108876578	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_108786916_108788031_108788090_108788851_108788967_108791674_108791803_108794539_108794722_108798427_108798587_108804888_108805009_108812630_108812709_108812819_108812928_108815940_108816106_108876087
H1_mix_00054643	chr2	+	2344	15	NIC	ENSG00000163006.12	novel	2375	15	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_6	41.468761294079	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGTTAAATAATACTGTC	23	True	NA	NA	False	AATAAA	-20	NA	108786798	108876578	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_108786916_108788031_108788090_108788851_108788967_108791674_108791803_108794539_108794722_108798427_108798587_108804891_108805009_108812630_108812709_108812819_108812928_108815940_108816106_108839184_108839302_108846737_108846931_108856793_108856971_108873450_108873590_108876087
H1_mix_00054644	chr2	+	2171	13	NIC	ENSG00000163006.12	novel	2375	15	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_9	54.6663490844434	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGTTAAATAATACTGTC	24	True	NA	NA	False	AATAAA	-20	NA	108786799	108876578	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_108786916_108788851_108788967_108791674_108791803_108794539_108794722_108798427_108798587_108804888_108805009_108812630_108812709_108812819_108812928_108815940_108816106_108846737_108846931_108856793_108856971_108873450_108873590_108876087
H1_mix_00054645	chr2	+	2271	2	FSM	ENSG00000204588.5	ENST00000336905.3	2271	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAAGGGGAATTCATTTG	1210	False	NA	NA	False	NA	NA	NA	109988271	109996140	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_109988803_109994400
H1_mix_00054647	chr2	+	2710	18	NIC	ENSG00000153093.20	novel	4885	19	NA	NA	-11	-7	combination_of_known_junctions	TRUE	canonical	3	30	junction_10	43.197542541919	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGAAGTCGTTCCCGCTG	NA	False	NA	8	True	AATAAA	-13	NA	110732527	111118541	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_110732775_110768367_110768465_110784731_110784816_110793649_110793737_110794075_110794175_110798609_110798725_110799013_110799101_110801651_110801725_110805262_110805396_110841370_110841406_110933488_110933643_110963623_110963714_110987107_110987218_110995892_110996005_111031626_111031715_111049217_111049289_111092864_111092967_111117615
H1_mix_00054651	chr2	+	4783	6	NIC	ENSG00000114999.8	novel	14267	7	NA	NA	0	-12	combination_of_known_splicesites	FALSE	canonical	3	29	junction_5	69.0379605724271	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCAAGTGTTTTTGTGCT	1	True	NA	23	True	AGTAAA	-9	NA	112482155	112532399	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_112482502_112485916_112485996_112494142_112494376_112501205_112501342_112502911_112503182_112528680
H1_mix_00054653	chr2	+	7506	16	NNC	ENSG00000125630.16	novel	7527	15	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	1	3	junction_15	87.0635527773949	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCTTTGCAAATATTTTC	8	True	NA	20	True	TATAAA	-15	NA	112542464	112579817	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_112542672_112547011_112547180_112547420_112547568_112549266_112549400_112550865_112551003_112551774_112551999_112552644_112552817_112557909_112558082_112559292_112559575_112564365_112564500_112567966_112568138_112568745_112568903_112572561_112572759_112573561_112573816_112574846_112579209_112579228
H1_mix_00054654	chr2	+	1211	5	FSM	ENSG00000136688.11	ENST00000259205.5	1211	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAGTAAACTGAAATTA	-1	True	NA	NA	False	AATAAA	-23	NA	112978005	112985658	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_112978079_112978619_112978694_112979220_112979326_112980008_112980149_112984839
H1_mix_00054655	chr2	+	837	2	FSM	ENSG00000125637.16	ENST00000465917.1	910	2	73	0	73	0	multi-exon	FALSE	canonical	1	1	junction_1	0	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGACACGGGCCTGCACTC	-11	True	NA	NA	False	NA	NA	NA	113157397	113183044	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_113157536_113182345
H1_mix_00054656	chr2	+	2154	2	ISM	ENSG00000146556.15	ENST00000685302.1	2051	11	-64	8686	-20	-8683	5prime_fragment	FALSE	canonical	2	10	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCCTTTGGTTGCCATTC	NA	False	NA	NA	False	NA	NA	NA	113583572	113590347	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_113583929_113588549
H1_mix_00054659	chr2	+	2306	10	FSM	ENSG00000144134.19	ENST00000409875.5	2282	10	-24	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	68.9585669124387	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAGTAAATGTATGTGC	15	False	NA	13	True	AGTAAA	-17	NA	113627286	113643392	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_113627401_113627855_113628011_113628549_113628714_113632914_113632945_113634152_113634233_113635050_113635131_113640893_113641006_113641355_113641481_113641780_113641865_113642030
H1_mix_00054660	chr2	+	811	1	FSM	ENSG00000230391.1	ENST00000446095.1	883	1	69	3	69	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTGTTCTTTCATAGAT	NA	False	NA	NA	False	NA	NA	NA	115468124	115468935	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_115468100_115468900
H1_mix_00054661	chr2	+	5380	2	Intergenic	novelGene_712	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	NA	False	NA	12	True	GATAAA	-18	NA	117257653	117284469	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_117257680_117279115
H1_mix_00054663	chr2	+	773	3	Intergenic	novelGene_715	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	23	junction_1	1.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	NA	False	NA	10	True	GATAAA	-16	NA	117279111	117284467	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_117279352_117281200_117281285_117284018
H1_mix_00054664	chr2	+	714	5	FSM	ENSG00000155368.18	ENST00000311521.8	714	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2834.53298622542	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGTGATCTGAGTTCTT	87	False	NA	56	True	ATTAAA	-24	NA	119367069	119372546	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_119367215_119367558_119367645_119368187_119368306_119370739_119370803_119372244
H1_mix_00054665	chr2	+	1097	8	ISM	ENSG00000163075.13	ENST00000413369.8	2823	24	4	55083	4	0	5prime_fragment	FALSE	canonical	3	17	junction_1	3.88087934491604	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGGGAAGAAACAAGAAAAA	11	True	NA	NA	False	AATATA	-41	NA	119544452	119601578	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_119544511_119546084_119546271_119549084_119549186_119559688_119559776_119559927_119560027_119562013_119562115_119587118_119587223_119601217
H1_mix_00054666	chr2	+	3172	24	NIC	ENSG00000088179.9	novel	11090	27	NA	NA	-109	-4	combination_of_known_splicesites	FALSE	canonical	2	7	junction_10	52.1741304343297	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTCTTTTGCAGTGGTT	114	False	NA	21	True	AGTAAA	-15	NA	119760067	119977457	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_119760385_119809836_119809992_119862535_119862644_119877322_119877366_119877463_119877543_119881785_119881831_119882096_119882150_119882502_119882624_119900717_119900807_119915178_119915243_119932423_119932550_119934799_119934959_119945080_119945241_119946340_119946425_119946517_119946575_119951972_119952130_119955156_119955324_119956843_119956935_119957015_119957078_119960806_119960954_119962615_119962745_119965496_119965646_119967836_119967973_119976983
H1_mix_00054667	chr2	+	7166	14	NIC	ENSG00000074047.22	novel	7136	14	NA	NA	25	4	intron_retention	FALSE	canonical	3	16	junction_8	45.7504163010128	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTGTTTGTTTGTTGTC	19	True	NA	12	True	AAGAAA	-22	NA	120735892	120992657	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_120736286_120797290_120797469_120927360_120927467_120951242_120951446_120955244_120955431_120968713_120968916_120970392_120970607_120971940_120972064_120974923_120975110_120978433_120978584_120982715_120982881_120984470_120984744_120986277_120986615_120988207
H1_mix_00054668	chr2	+	689	2	FSM	ENSG00000265451.1	ENST00000577914.1	682	2	-7	0	-7	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAGTGTGCAACAGAAAG	NA	False	NA	NA	False	ACTAAA	-20	NA	121530414	121532705	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_121530776_121532377
H1_mix_00054669	chr2	+	1185	2	FSM	ENSG00000236859.8	ENST00000668016.1	1168	2	-17	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACCACTTGTGTTATTTC	-25	True	NA	11	True	ACTAAA	-20	NA	121649620	121651536	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_121649737_121650467
H1_mix_00054670	chr2	+	1232	4	FSM	ENSG00000236859.8	ENST00000662168.1	1232	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.48528137423857	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATATCTTTTCTTTCTAA	-25	True	NA	12	True	AATAAA	-18	NA	121649620	121728563	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_121649737_121650467_121650683_121705767_121705908_121727802
H1_mix_00054672	chr2	+	2729	6	FSM	ENSG00000211460.12	ENST00000490104.5	2717	6	-12	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	513.253543582507	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGGTCTTGGAATTCCA	-24	True	NA	3	True	ATTAAA	-13	NA	121755650	121767179	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_121755846_121757239_121757435_121758709_121758807_121761408_121761525_121763004_121763085_121765133
H1_mix_00054673	chr2	+	901	1	FSM	ENSG00000227738.1	ENST00000427142.1	901	1	-27	27	-27	-27	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATGTTGAATACTGTTG	NA	False	NA	NA	False	NA	NA	NA	123762143	123763044	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_123762100_123763000
H1_mix_00054675	chr2	+	258	1	FSM	ENSG00000273950.1	ENST00000614637.1	258	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACGAAAAAAATTTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	127856889	127857147	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_127856900_127857100
H1_mix_00054676	chr2	+	562	1	FSM	ENSG00000217289.3	ENST00000401540.2	1152	1	400	190	400	-190	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGCCACACCACATGAAC	NA	False	NA	NA	False	NA	NA	NA	129993288	129993850	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_129993300_129993800
H1_mix_00054678	chr2	+	789	1	FSM	ENSG00000213225.7	ENST00000450578.1	752	1	-148	111	-148	-111	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTCCTTTCAAGTCACA	1847	False	NA	NA	False	NA	NA	NA	130231206	130231995	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_130231200_130232000
H1_mix_00054679	chr2	+	3477	3	NIC	ENSG00000240253.6	novel	552	4	NA	NA	-398	288	intron_retention	FALSE	canonical	2	8	junction_1	17.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTCGTTGTCATTA	NA	False	NA	NA	False	AATAAA	-19	NA	130692883	130704749	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_130693797_130696341_130696410_130702253
H1_mix_00054680	chr2	+	2800	10	Fusion	ENSG00000284479.1_ENSG00000136002.20	novel	3229	7	NA	NA	54	0	multi-exon	FALSE	canonical	1	2	junction_7	36.289303937206	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGCTAGCCCGTTTT	3	True	NA	15	True	AATAAA	-15	NA	131035025	131047253	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr2_+_131035289_131038852_131039033_131040015_131040193_131040260_131040441_131041229_131041463_131041814_131041945_131043451_131043584_131044331_131044543_131045368_131045447_131046037
H1_mix_00054681	chr2	+	343	1	FSM	ENSG00000232742.3	ENST00000449922.1	579	1	264	-28	264	28	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATTACGTGAGAAACATC	NA	False	NA	NA	False	TATAAA	-8	NA	131461262	131461605	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_131461300_131461600
H1_mix_00054682	chr2	+	1493	5	FSM	ENSG00000075886.11	ENST00000321253.7	1520	5	13	14	13	-14	multi-exon	FALSE	canonical	0	0	junction_1	0.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTATAAAACCAAGCCCTC	24	False	NA	NA	False	ATTAAA	-5	NA	131476131	131482920	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_131476203_131478163_131478387_131479307_131479457_131480068_131480750_131482551
H1_mix_00054683	chr2	+	4034	19	NNC	ENSG00000152117.18	novel	3785	18	NA	NA	5	0	intron_retention	TRUE	canonical	3	21	junction_8	45.5954093963931	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTCTGGCACCTGGGCTC	6	True	NA	34	True	AATAAA	-18	NA	131493088	131521573	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_131493141_131497209_131497294_131498866_131498954_131500203_131500351_131500505_131500582_131500961_131501071_131501180_131501234_131501357_131501509_131502454_131502693_131506311_131506443_131508536_131508609_131515601_131515748_131516313_131516405_131516856_131516958_131517726_131517891_131518502_131518709_131519049_131519284_131519534_131519667_131519813
H1_mix_00054685	chr2	+	1289	4	FSM	ENSG00000287151.1	ENST00000624391.3	1335	4	42	4	42	-4	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCATGGCTTCTTTCACT	NA	False	NA	NA	False	AATAAA	-17	NA	131722416	131767400	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_131722649_131750632_131750831_131751508_131751586_131766618
H1_mix_00054686	chr2	+	597	1	FSM	ENSG00000230992.3	ENST00000458407.1	597	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTAGAGGTCTCGAGCTC	5248	False	NA	NA	False	NA	NA	NA	132352721	132353318	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_132352700_132353300
H1_mix_00054687	chr2	+	8344	17	NIC	ENSG00000152127.9	novel	8252	17	NA	NA	-95	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_12	3.36746844825605	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGGAAGTGATTTTTGG	132	False	NA	22	True	AATAAA	-15	NA	134120086	134454621	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_134120292_134254264_134254645_134270385_134270551_134317528_134317606_134318649_134318740_134336216_134336289_134338258_134338421_134341589_134341760_134344929_134345065_134349804_134349939_134362274_134362409_134402987_134403138_134412868_134413016_134422802_134422920_134428364_134428440_134441757_134441916_134448648
H1_mix_00054688	chr2	+	8252	17	FSM	ENSG00000152127.9	ENST00000409645.5	8252	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.62068708949006	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGGAAGTGATTTTTGG	1	True	NA	22	True	AATAAA	-15	NA	134120181	134454621	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_134120292_134254261_134254645_134270385_134270551_134317528_134317606_134318649_134318740_134336216_134336289_134338258_134338421_134341589_134341760_134344929_134345065_134349804_134349939_134362274_134362409_134402987_134403138_134412868_134413016_134422802_134422920_134428364_134428440_134441757_134441916_134448648
H1_mix_00054689	chr2	+	8337	18	NIC	ENSG00000152127.9	novel	8252	17	NA	NA	36	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	3.45510003660904	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGGAAGTGATTTTTGG	37	False	NA	22	True	AATAAA	-15	NA	134120217	134454621	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_134120292_134253094_134253219_134254264_134254645_134270385_134270551_134317528_134317606_134318649_134318740_134336216_134336289_134338258_134338421_134341589_134341760_134344929_134345065_134349804_134349939_134362274_134362409_134402987_134403138_134412868_134413016_134422802_134422920_134428364_134428440_134441757_134441916_134448648
H1_mix_00054691	chr2	+	446	2	FSM	ENSG00000115839.19	ENST00000497080.1	446	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATACATATC	NA	False	NA	NA	False	AATAGA	-29	NA	135168547	135169977	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_135168750_135169733
H1_mix_00054692	chr2	+	3305	22	NIC	ENSG00000048991.17	novel	4648	26	NA	NA	-2	74	combination_of_known_junctions	FALSE	canonical	2	6	junction_19	72.6108816642135	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGAAGAAAGGCCAGTGA	-17	True	NA	NA	False	NA	NA	NA	135531470	135724417	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_135531634_135602499_135602709_135604805_135605017_135621493_135621609_135622653_135622733_135631717_135631778_135631860_135632002_135635889_135635999_135636087_135636184_135638617_135638656_135638738_135638790_135638895_135639123_135645378_135645528_135651732_135652033_135661269_135661394_135675331_135675487_135680172_135680325_135709432_135709537_135710058_135710232_135721923_135722007_135722468_135722554_135723936
H1_mix_00054693	chr2	+	803	5	NNC	ENSG00000048991.17	novel	4648	26	NA	NA	3	-12073	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	137.146591281009	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTCTCATGAAAGGTAC	-1	True	NA	NA	False	AATAAA	-30	NA	135531486	135619670	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_135531634_135602499_135602709_135604805_135605017_135616667_135616758_135619524
H1_mix_00054694	chr2	+	4357	24	NIC	ENSG00000048991.17	novel	4648	26	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	65	junction_4	71.4108165889308	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGCTCACTTTGTCTT	13	True	NA	NA	False	AATAAA	-10	NA	135531500	135725264	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_135531634_135602499_135602709_135604805_135605017_135616667_135616758_135621493_135621609_135622653_135622733_135631717_135631778_135631860_135632002_135635889_135635999_135636087_135636184_135638617_135638656_135638738_135638790_135638895_135639123_135645378_135645528_135651732_135652033_135661269_135661394_135675331_135675487_135680172_135680325_135709432_135709537_135710058_135710232_135715549_135715695_135721923_135722007_135722468_135722554_135723936
H1_mix_00054695	chr2	+	4522	24	NIC	ENSG00000048991.17	novel	4648	26	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	31	junction_13	77.0726954120059	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGCTCACTTTGTCTT	13	True	NA	NA	False	AATAAA	-10	NA	135531500	135725264	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_135531634_135602499_135602709_135604805_135605017_135621493_135621609_135622653_135622733_135631717_135631778_135631860_135632002_135635889_135635999_135636087_135636184_135638617_135638656_135638738_135638790_135638895_135639123_135641535_135641791_135645378_135645528_135651732_135652033_135661269_135661394_135675331_135675487_135680172_135680325_135709432_135709537_135710058_135710232_135715549_135715695_135721923_135722007_135722468_135722554_135723936
H1_mix_00054696	chr2	+	3394	9	FSM	ENSG00000144224.17	ENST00000490163.5	3394	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	180.947333497899	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTACCTTGCATCTTG	NA	False	NA	8	True	AATAAA	-15	NA	135754151	135785055	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_135754278_135755516_135755692_135769768_135769824_135770570_135770736_135772419_135772548_135776248_135776352_135778947_135779080_135780182_135780386_135782748
H1_mix_00054697	chr2	+	493	2	FSM	ENSG00000150540.14	ENST00000280096.5	504	2	6	5	0	-5	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATCCTTGGCATGTGGA	6	True	NA	NA	False	AATAAA	-19	NA	137964478	137967439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_137964629_137967096
H1_mix_00054699	chr2	+	1266	3	Intergenic	novelGene_721	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	5	junction_1	2	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCATCTGTACTTTTTGCT	NA	False	NA	NA	False	TATAAA	-33	NA	139835353	139871452	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_139835413_139868003_139868079_139870320
H1_mix_00054700	chr2	+	255	2	Antisense	novelGene_ENSG00000168702.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCTTATGCATAGGAAGAA	NA	False	NA	NA	False	AATAAA	-31	NA	140428468	140518987	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_+_140428687_140518950
H1_mix_00054702	chr2	+	2162	5	FSM	ENSG00000204406.14	ENST00000496893.3	2788	5	626	0	626	0	multi-exon	FALSE	canonical	2	2	junction_1	3.11247489949718	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGATAATGTAAAAGATGCT	2468	False	NA	14	True	AATAAA	-23	NA	148485741	148513463	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_148485951_148489385_148490595_148502435_148502510_148510059_148510136_148512869
H1_mix_00054703	chr2	+	6886	26	FSM	ENSG00000168280.18	ENST00000677891.1	6886	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_25	41.2511139243536	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTCTGTTTCTCCTTAT	-6	True	NA	NA	False	AATAAA	-17	NA	148875226	149026759	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_148875744_148922136_148922228_148929280_148929355_148937283_148937389_148941609_148941659_148941934_148941991_148942672_148942761_148946898_148947024_148949838_148949944_148950313_148950463_148961970_148962120_148973335_148973512_148978921_148978991_148981354_148981562_148983619_148983767_148991009_148991199_148994420_148994539_148997263_148997341_148998399_148998510_149000422_149000525_149000721_149000783_149005392_149005465_149007962_149008068_149010134_149010352_149011569_149011684_149023145
H1_mix_00054704	chr2	+	7480	10	FSM	ENSG00000168280.18	ENST00000677705.1	7760	10	280	0	280	0	multi-exon	FALSE	canonical	3	179	junction_2	11.8831761976001	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTCTGTTTCTCCTTAT	7870	False	NA	NA	False	AATAAA	-17	NA	148991598	149026759	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_148994539_148997263_148997341_148998399_148998510_149000422_149000525_149000721_149000783_149005392_149005465_149007962_149008068_149010134_149010352_149011569_149011684_149023077
H1_mix_00054706	chr2	+	1509	8	NIC	ENSG00000150556.17	novel	1345	7	NA	NA	3	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	16.627982316516	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATGTAAATGCATGCTTG	-3	True	NA	NA	False	AATAAA	-14	NA	149038701	149215252	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_149038802_149130882_149130954_149160763_149160836_149205252_149205405_149206018_149206196_149208313_149208413_149212991_149213123_149214545
H1_mix_00054707	chr2	+	1341	7	NIC	ENSG00000150556.17	novel	1248	6	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	15.3559615640166	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAATGCATGCTTGTGTG	-3	True	NA	NA	False	AATAAA	-18	NA	149038701	149215256	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_149038802_149077519_149077597_149130882_149130954_149205252_149205405_149208313_149208413_149212991_149213123_149214545
H1_mix_00054709	chr2	+	3494	4	NIC	ENSG00000187123.15	novel	4011	5	NA	NA	-96	1	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	27.7168220079832	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTACCAGGCTCCTCCCTG	460	False	NA	4	True	AATAAA	-14	NA	149330490	149473624	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_149330723_149437637_149437827_149468644_149468776_149470682
H1_mix_00054711	chr2	+	1803	8	ISM	ENSG00000144278.15	ENST00000392825.8	5657	13	15	194556	15	-149917	5prime_fragment	FALSE	canonical	3	67	junction_1	10.6195814514547	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAACGTGTTGCTCTATA	16	False	NA	11	True	AATAAA	-17	NA	153871936	154259423	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_153872304_153900935_153901008_153944393_153944640_154140336_154140506_154242029_154242197_154242697_154242906_154245811_154245983_154259020
H1_mix_00054712	chr2	+	837	1	FSM	ENSG00000230251.1	ENST00000437447.1	837	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCCACCCTGCCTTCACC	NA	False	NA	NA	False	NA	NA	NA	154286588	154287425	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_154286600_154287400
H1_mix_00054713	chr2	+	606	4	FSM	ENSG00000144278.15	ENST00000450838.5	606	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	17.931970208417	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGATCAAAGCACATAAGAA	NA	False	NA	NA	False	ACTAAA	-9	NA	154301578	154450730	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_154301590_154395990_154396131_154438591_154438727_154450410
H1_mix_00054714	chr2	+	412	1	FSM	ENSG00000227682.2	ENST00000616464.1	443	1	-61	92	-2	-92	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACTAGAAAATT	NA	False	NA	NA	False	AGTAAA	-18	NA	155269630	155270042	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_155269600_155270000
H1_mix_00054715	chr2	+	1644	2	NNC	ENSG00000287048.1	novel	1624	2	NA	NA	-65377	5	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	0	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATAGTGTCTTTAAATTA	NA	False	NA	9	True	ATTAAA	-20	NA	156723353	156865706	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_156723414_156864122
H1_mix_00054716	chr2	+	339	1	FSM	ENSG00000270557.1	ENST00000604340.1	883	1	-83	627	-83	-627	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTGTTCAATAAAGTTTT	1015	False	NA	NA	False	NA	NA	NA	157877599	157877938	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_157877600_157877900
H1_mix_00054717	chr2	+	4430	22	NNC	ENSG00000144283.23	novel	4603	22	NA	NA	-1	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	35.0127932563224	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTTCTCTATTCTTT	149	False	NA	25	True	AATAAA	-21	NA	158457112	158681426	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_158457219_158533179_158533317_158577270_158577384_158603069_158603105_158620989_158621116_158621230_158621422_158624877_158625428_158631752_158631942_158634072_158634290_158640626_158640760_158642485_158642700_158658130_158658315_158661332_158661451_158662896_158663089_158663271_158663446_158666412_158666564_158669719_158669916_158673676_158673762_158673882_158674001_158676738_158676868_158678580_158678655_158680428
H1_mix_00054719	chr2	+	4707	22	NIC	ENSG00000144283.23	novel	3099	14	NA	NA	-259	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	34.6471687711258	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTTCTCTATTCTTT	24	False	NA	25	True	AATAAA	-21	NA	158457933	158681426	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_158458308_158533179_158533317_158577270_158577384_158603069_158603105_158620989_158621122_158621230_158621422_158624877_158625428_158631752_158631942_158634069_158634290_158640626_158640760_158642485_158642700_158658130_158658315_158661332_158661451_158662896_158663089_158663271_158663446_158666412_158666564_158669719_158669916_158673676_158673762_158673882_158674001_158676738_158676868_158678580_158678655_158680428
H1_mix_00054721	chr2	+	11737	7	FSM	ENSG00000178662.16	ENST00000651982.1	11737	7	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_3	7.99478997014097	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACTGTTGCATTTCTGTT	-1	True	NA	11	True	AGTAAA	-19	NA	165469697	165689407	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_165469741_165494758_165494929_165517872_165517962_165595042_165595214_165657760_165658021_165676311_165676609_165678700
H1_mix_00054722	chr2	+	2709	2	ISM	ENSG00000235192.1	ENST00000425688.1	779	3	96	6254	96	-6254	5prime_fragment	FALSE	canonical	3	11	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATGTAGAGATTCCTTC	114	False	NA	3	True	AATAAA	-20	NA	165794946	165803756	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_165795080_165801180
H1_mix_00054723	chr2	+	6152	11	FSM	ENSG00000138398.17	ENST00000676508.1	6150	11	-2	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	189.815199602139	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGGTTTTGTATTTTT	-17	True	NA	15	True	AATAAA	-16	NA	169584341	169641406	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_169584491_169606038_169606147_169607103_169607149_169608670_169608759_169614463_169614494_169614584_169614725_169630773_169630988_169631774_169631934_169633159_169633248_169636091_169636229_169636412
H1_mix_00054724	chr2	+	785	4	ISM	ENSG00000144362.12	ENST00000449906.5	631	5	-5	2814	-5	4	5prime_fragment	FALSE	canonical	0	0	junction_3	42.523196284172	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCTACTTAGTGTTATAT	-1	True	NA	6	True	ATTAAA	-17	NA	169694481	169698304	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_169694623_169695214_169695248_169697360_169697532_169697864
H1_mix_00054726	chr2	+	5129	19	FSM	ENSG00000144357.18	ENST00000392632.6	5129	19	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_8	12.3882660531032	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCCTTAAAATGTTTACTG	NA	False	NA	19	True	AATAAA	-27	NA	169946309	170084120	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_169946393_169947541_169947716_169949604_169950066_169958437_169958527_169986644_169986795_169994322_169994457_170001303_170001415_170006989_170007203_170008803_170008941_170015280_170015367_170029345_170029449_170040881_170040986_170055459_170055585_170061078_170061187_170061317_170061444_170073427_170073608_170079813_170080024_170080544_170080685_170081725
H1_mix_00054727	chr2	+	1388	1	FSM	ENSG00000128692.8	ENST00000461070.1	984	1	-98	-306	-98	306	mono-exon	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAACTTAGGAAGTATTTA	-9	True	NA	NA	False	ATTAAA	-29	NA	170751706	170753094	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_170751700_170753100
H1_mix_00054728	chr2	+	906	8	Fusion	ENSG00000204334.7_ENSG00000239467.7	novel	1444	4	NA	NA	-11	0	multi-exon	FALSE	canonical	3	13	junction_1	24.5107223517399	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTAATTCTTCCTTATTTG	-7	True	NA	38	True	TATAAA	-17	NA	170771036	170798971	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr2_+_170771188_170777376_170777426_170777643_170777681_170782240_170782390_170784645_170784834_170792862_170792921_170798040_170798113_170798769
H1_mix_00054729	chr2	+	916	9	Fusion	ENSG00000204334.7_ENSG00000239467.7	novel	1444	4	NA	NA	10	0	multi-exon	FALSE	canonical	3	17	junction_8	23.4170744329859	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTAATTCTTCCTTATTTG	14	True	NA	38	True	TATAAA	-17	NA	170771057	170798971	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr2_+_170771188_170777146_170777178_170777376_170777426_170777643_170777681_170782240_170782390_170784645_170784834_170792862_170792921_170798040_170798113_170798769
H1_mix_00054730	chr2	+	1570	2	FSM	ENSG00000239467.7	ENST00000663589.1	1570	2	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTATTTATTCTATGAAA	5403	False	NA	NA	False	ATTAAA	-40	NA	170776502	170778290	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_170777426_170777643
H1_mix_00054731	chr2	+	222	2	FSM	ENSG00000128683.14	ENST00000486850.1	461	2	0	239	0	13	multi-exon	FALSE	canonical	3	9	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCCCCTGCCCCACTCCC	3676	False	NA	NA	False	NA	NA	NA	170822086	170829633	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_170822150_170829474
H1_mix_00054733	chr2	+	5211	12	NIC	ENSG00000115827.14	novel	5853	14	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_9	41.1252873083988	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTGTGAACATGTGTC	8	True	NA	17	True	AATAAA	-25	NA	171434233	171485052	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_171434271_171435082_171435187_171443522_171443614_171448680_171448818_171449878_171449958_171453123_171453214_171457970_171458076_171458371_171458478_171468887_171469031_171477986_171478071_171480037_171480194_171480973
H1_mix_00054734	chr2	+	5179	12	NIC	ENSG00000115827.14	novel	2429	13	NA	NA	-4	-5	combination_of_known_junctions	FALSE	canonical	2	11	junction_6	41.4471684026188	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAGACAATTCTTTTGTGA	21	True	NA	8	True	AATAAA	-16	NA	171434246	171485043	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_171434271_171435082_171435187_171443522_171443614_171448680_171448818_171449878_171449958_171453123_171453214_171468887_171469031_171473865_171473976_171476859_171476951_171477986_171478071_171480037_171480194_171480973
H1_mix_00054735	chr2	+	891	1	FSM	ENSG00000228507.1	ENST00000458547.1	510	1	122	-503	122	503	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCTGGGCAACAGAGCGA	NA	False	NA	NA	False	NA	NA	NA	171491543	171492434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_171491500_171492400
H1_mix_00054736	chr2	+	219	1	FSM	ENSG00000234061.1	ENST00000441891.1	191	1	116	-144	116	144	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTCATCACTATATAATTC	NA	False	NA	NA	False	TTTAAA	-45	NA	171493020	171493239	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_171493000_171493200
H1_mix_00054737	chr2	+	4228	3	FSM	ENSG00000071967.12	ENST00000375252.3	3540	3	-198	-490	32	7	multi-exon	FALSE	canonical	2	3	junction_1	25	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTTATCAATTTGTCTG	31	False	NA	11	True	AATAAA	-21	NA	171522278	171558136	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_171522739_171553345_171553501_171554523
H1_mix_00054738	chr2	+	587	4	FSM	ENSG00000077380.16	ENST00000470286.1	587	4	0	0	0	0	multi-exon	FALSE	canonical	3	591	junction_1	55.5297717945568	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCCCTTGTATGGAATA	NA	False	NA	NA	False	AATGAA	-24	NA	171715389	171726852	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_171715444_171725617_171725714_171725918_171726294_171726790
H1_mix_00054740	chr2	+	2958	4	FSM	ENSG00000155636.15	ENST00000455903.6	2964	4	0	6	0	-6	multi-exon	FALSE	canonical	1	1	junction_3	55.3052137385497	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAATGTCTCCTCTTCAA	NA	False	NA	NA	False	AATAAA	-8	NA	178123862	178139005	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_178123913_178124126_178124291_178125983_178126185_178136462
H1_mix_00054741	chr2	+	4094	24	NIC	ENSG00000079156.17	novel	10652	25	NA	NA	3	615	combination_of_known_splicesites	FALSE	canonical	3	19	junction_3	7.71736068579352	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCACCTAACCTCACAGTG	-9	True	NA	NA	False	AATAAA	-10	NA	178194483	178396400	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_178194675_178284926_178285122_178306029_178306287_178328255_178328379_178331551_178331606_178332640_178332755_178332870_178333042_178336300_178336434_178338990_178339095_178339671_178339765_178349223_178349390_178361681_178361816_178372125_178372234_178373889_178374028_178382419_178382508_178383023_178383278_178384038_178384177_178385457_178385522_178387060_178387140_178389008_178389154_178391072_178391218_178392411_178392539_178394312_178394436_178395450
H1_mix_00054742	chr2	+	2268	5	FSM	ENSG00000223960.8	ENST00000453026.7	2366	5	93	5	26	-5	multi-exon	FALSE	canonical	1	1	junction_2	11.5108644332213	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTACTCATTTGTATATAG	61	False	NA	16	True	ATTAAA	-18	NA	178413727	178440238	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_178414114_178426365_178426662_178430769_178430890_178433381_178433476_178438866
H1_mix_00054743	chr2	+	441	1	FSM	ENSG00000238082.1	ENST00000437039.1	713	1	371	-99	371	99	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCATGGGACTGGCCCAGG	1810	False	NA	NA	False	NA	NA	NA	178455086	178455527	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_178455100_178455500
H1_mix_00054744	chr2	+	940	1	FSM	ENSG00000270956.1	ENST00000604692.1	675	1	-211	-54	-211	54	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTTTGTACTTTCCTT	9922	False	NA	NA	False	NA	NA	NA	178540913	178541853	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_178540900_178541900
H1_mix_00054745	chr2	+	463	1	FSM	ENSG00000271401.1	ENST00000605021.1	463	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTATTTCAGCTTTTAAAG	NA	False	NA	NA	False	ATTAAA	-24	NA	178644716	178645179	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_178644700_178645200
H1_mix_00054746	chr2	+	2992	1	FSM	ENSG00000267784.1	ENST00000590024.1	3590	1	19	579	19	-579	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCCATTTCAGCAAATGAT	NA	False	NA	NA	False	NA	NA	NA	178723475	178726467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_178723500_178726500
H1_mix_00054747	chr2	+	6717	28	FSM	ENSG00000115232.14	ENST00000397033.7	6781	28	-24	88	-24	-88	multi-exon	FALSE	canonical	2	4	junction_19	1.79008088497697	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCAATGTAGACACGCATA	-24	True	NA	NA	False	AATAAA	-7	NA	181457361	181538852	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_181457852_181458195_181458318_181474959_181475067_181475158_181475289_181478756_181478825_181480136_181480267_181481597_181481684_181482359_181482423_181482513_181482652_181485880_181485993_181493324_181493420_181494721_181494813_181495370_181495417_181495782_181495938_181498622_181498778_181509657_181509808_181511698_181511776_181522190_181522342_181523436_181523533_181524170_181524251_181525201_181525292_181527296_181527388_181529540_181529649_181530523_181530650_181531656_181531777_181534271_181534371_181534815_181534936_181535431
H1_mix_00054748	chr2	+	2526	2	FSM	ENSG00000138434.17	ENST00000480753.1	2526	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGGAGTCTTTATTTTGA	4	True	NA	9	True	AATAAA	-22	NA	181891832	181894695	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_181892278_181892614
H1_mix_00054749	chr2	+	1591	3	FSM	ENSG00000272800.3	ENST00000661621.1	1592	3	1	0	1	0	multi-exon	FALSE	canonical	0	0	junction_2	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTGAGTGTAAGAATGC	4464	False	NA	NA	False	AATAAA	-29	NA	183178806	183215414	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_183178908_183179225_183179412_183214110
H1_mix_00054750	chr2	+	1529	3	NNC	ENSG00000272800.3	novel	1592	3	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0.5	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTGAGTGTAAGAATGC	4464	False	NA	NA	False	AATAAA	-29	NA	183178806	183215414	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_183178908_183182556_183182681_183214110
H1_mix_00054751	chr2	+	943	5	NNC	ENSG00000286797.1	novel	3314	4	NA	NA	-61	226328	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_3	12.1963109176505	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTGTCAAATTGATATCC	NA	False	NA	NA	False	NA	NA	NA	185425001	185731936	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_185425508_185434096_185434192_185483033_185483092_185729348_185729420_185731723
H1_mix_00054752	chr2	+	3314	4	FSM	ENSG00000286797.1	ENST00000671641.1	3314	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	14.8398861930347	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATATATGAGCAGGCA	NA	False	NA	NA	False	NA	NA	NA	185425292	185505608	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_185425508_185434096_185434192_185483033_185483092_185502662
H1_mix_00054753	chr2	+	263	1	FSM	ENSG00000227692.1	ENST00000444288.1	531	1	-157	425	-157	-425	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTAAGACCTTATGACAGT	NA	False	NA	NA	False	NA	NA	NA	186364440	186364703	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_186364400_186364700
H1_mix_00054754	chr2	+	5428	8	NNC	ENSG00000144369.14	novel	5731	8	NA	NA	15029	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	9.05313115300278	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGAGCATTGTTTAATTT	NA	False	NA	12	True	AATAAA	-17	NA	186709088	186765959	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_186709138_186740227_186740462_186743482_186743576_186747091_186747251_186751133_186751305_186753932_186754050_186761112_186761237_186761478
H1_mix_00054755	chr2	+	219	1	Intergenic	novelGene_745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTTTGGGTTGGGAAGAA	1284	False	NA	NA	False	NA	NA	NA	187673143	187673362	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_187673100_187673400
H1_mix_00054756	chr2	+	3401	12	NIC	ENSG00000144366.16	novel	3544	13	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	3	38	junction_1	179.865744238344	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATTGCATAATTCATTT	3	True	NA	NA	False	AATAAA	-15	NA	188292780	188595926	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_188293181_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180_188541319_188569238_188569356_188570027_188570121_188584264_188584404_188587854_188587950_188593939
H1_mix_00054757	chr2	+	400	3	FSM	ENSG00000253559.1	ENST00000520651.1	508	3	108	0	-9	0	multi-exon	FALSE	canonical	0	0	junction_2	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTAATGTATTATTTATGA	7805	False	NA	NA	False	AATAAA	-22	NA	189762811	189765556	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_189762993_189764854_189764976_189765458
H1_mix_00054758	chr2	+	2841	13	FSM	ENSG00000064933.19	ENST00000450931.5	2817	13	-24	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	203.19448811422	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGATTCTCAAGAACCA	-4	True	NA	26	True	AATAAA	-16	NA	189784488	189877627	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_189784565_189785345_189785472_189791789_189791942_189795768_189795952_189805651_189805755_189818016_189818181_189852654_189852778_189853938_189854083_189854238_189855129_189863742_189863975_189867798_189867930_189873495_189873657_189877271
H1_mix_00054761	chr2	+	4519	9	NIC	ENSG00000138386.17	novel	4508	10	NA	NA	0	0	intron_retention	FALSE	canonical	2	3	junction_1	35.4612464529943	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTATGTTTATAGCATTT	0	True	NA	14	True	AATAAA	-19	NA	190648894	190692766	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_190649361_190649845_190649983_190659157_190659996_190670325_190670460_190673100_190673153_190683737_190683828_190685475_190685639_190687200_190687318_190690244
H1_mix_00054762	chr2	+	4126	8	NIC	ENSG00000138386.17	novel	4508	10	NA	NA	65	0	intron_retention	FALSE	canonical	3	19	junction_5	29.3062645667636	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTATGTTTATAGCATTT	45	False	NA	14	True	AATAAA	-19	NA	190649147	190692766	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_190649361_190659157_190659996_190670325_190670460_190673100_190673153_190683737_190683828_190685478_190685639_190687200_190687318_190690244
H1_mix_00054764	chr2	+	5067	29	NNC	ENSG00000128641.19	novel	5069	31	NA	NA	0	280	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_16	111.861316287771	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCCATATGTTTGCAAAAG	-8	True	NA	NA	False	NA	NA	NA	191245403	191425669	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_191245627_191276886_191277031_191296110_191296227_191329934_191330030_191341460_191341566_191346235_191346283_191350161_191350226_191360630_191360730_191362267_191362372_191363727_191363876_191364157_191364277_191369541_191369629_191370226_191370293_191381461_191381567_191383279_191383343_191385883_191385974_191387223_191387451_191390291_191390493_191392107_191392202_191393072_191393223_191396428_191396498_191400381_191400469_191408114_191408190_191409043_191409179_191411065_191411173_191414047_191414181_191414516_191414670_191416114_191416243_191423836
H1_mix_00054765	chr2	+	2370	7	FSM	ENSG00000173559.15	ENST00000307849.7	3002	7	-1	633	-1	0	multi-exon	FALSE	canonical	1	4	junction_4	8.58292879305582	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACGTAATTTTTGCCCTT	-1	True	NA	7	True	AATAAA	-22	NA	191678134	191686939	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_191678706_191678989_191679129_191681945_191682018_191682491_191682596_191683728_191683805_191684229_191684297_191685598
H1_mix_00054766	chr2	+	644	3	NNC	ENSG00000196950.14	novel	593	3	NA	NA	10340	-30483	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	161	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTATGTACTATTCATCA	14	False	NA	NA	False	ATTAAA	-21	NA	195586316	195628104	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_195586418_195606135_195606234_195627659
H1_mix_00054767	chr2	+	3658	25	NIC	ENSG00000144395.18	novel	3597	28	NA	NA	-40	-8	intron_retention	FALSE	canonical	2	3	junction_16	20.6012068147044	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTGTATGATAGGAGAT	12	False	NA	23	True	AATAAA	-11	NA	196639674	196732784	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_196639779_196646340_196646505_196656632_196656854_196656957_196657137_196658791_196658861_196669832_196669877_196672344_196672438_196674240_196674349_196676142_196676268_196676553_196676732_196677114_196677193_196677292_196677362_196701108_196701181_196712144_196712253_196718502_196718632_196719496_196719585_196720173_196720235_196720574_196720669_196721521_196721692_196725972_196726100_196729192_196729862_196729956_196730119_196730858_196730946_196732032_196732153_196732445
H1_mix_00054768	chr2	+	636	2	Intergenic	novelGene_750	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCCAGGAGCTTGCTTC	NA	False	NA	NA	False	NA	NA	NA	199179904	199181628	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_199179963_199181050
H1_mix_00054769	chr2	+	1402	2	FSM	ENSG00000225953.4	ENST00000666719.2	2090	2	177	511	37	-511	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTGTGGTTAGTTTGTT	178	False	NA	NA	False	ATTAAA	-3	NA	199457873	199460908	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_199458010_199459642
H1_mix_00054772	chr2	+	519	3	FSM	ENSG00000163535.18	ENST00000488636.5	576	3	0	57	0	-57	multi-exon	FALSE	canonical	3	193	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTTTTTTCTTTTCATC	8879	False	NA	NA	False	NA	NA	NA	200535045	200542893	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_200535172_200536064_200536143_200542578
H1_mix_00054773	chr2	+	1821	9	FSM	ENSG00000196290.17	ENST00000651500.1	1821	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	202.368321384549	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTCAAGTGATTCTGTCC	-2	True	NA	35	True	AATAAA	-28	NA	200889368	200903938	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_200889653_200890522_200890586_200891735_200891790_200891917_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
H1_mix_00054774	chr2	+	4577	11	Fusion	ENSG00000003402.21_ENSG00000234431.2	novel	2128	10	NA	NA	-9	1266	intron_retention	FALSE	canonical	2	7	junction_1	40.8814138698749	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACACCAACAATACACAAGCA	938	False	NA	NA	False	NA	NA	NA	201118513	201168812	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr2_+_201118902_201129728_201130147_201133028_201133135_201135971_201136108_201140356_201140440_201145377_201145433_201149002_201149053_201149753_201149836_201160431_201160943_201162995_201164085_201167153
H1_mix_00054775	chr2	+	1091	6	FSM	ENSG00000003402.21	ENST00000474842.1	1091	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	10.2097992144802	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACCAAAAGGCTGGGCGT	10	True	NA	NA	False	AAGAAA	-22	NA	201140185	201163973	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_201140440_201145377_201145433_201149002_201149053_201149753_201149836_201160431_201160943_201163834
H1_mix_00054777	chr2	+	348	1	FSM	ENSG00000230799.1	ENST00000448547.1	837	1	385	104	385	-104	mono-exon	FALSE	NA	NA	NA	NA	NA	211	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATTCACCAAGTCTCCG	NA	False	NA	NA	False	NA	NA	NA	201763121	201763469	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_201763100_201763500
H1_mix_00054780	chr2	+	273	1	FSM	ENSG00000232479.2	ENST00000449849.2	1296	1	-15	1038	-15	-1038	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTAAGCTGGATGTGCACA	NA	False	NA	NA	False	NA	NA	NA	202924593	202924866	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_202924600_202924900
H1_mix_00054781	chr2	+	2364	11	FSM	ENSG00000144426.19	ENST00000682333.1	2545	11	34	147	-23	-147	multi-exon	FALSE	canonical	1	2	junction_10	4.6518813398452	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATATATCAATTTATTGT	-9	True	NA	NA	False	NA	NA	NA	203014901	203096270	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_203014983_203016155_203016436_203041764_203041857_203049813_203049976_203056426_203056509_203057325_203057454_203068392_203068476_203077751_203077838_203083218_203083526_203084462_203084570_203095314
H1_mix_00054782	chr2	+	1405	12	NIC	ENSG00000119004.17	novel	10552	13	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_8	50.9032464177656	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTATTTGTACTTAATTT	9	True	NA	4	True	TATAAA	-24	NA	203239031	203297014	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_203239135_203245845_203245896_203246754_203246922_203251966_203252110_203266513_203266682_203272669_203272749_203278572_203278689_203280058_203280114_203289764_203289877_203292261_203292327_203296473_203296564_203296757
H1_mix_00054783	chr2	+	5684	9	NNC	ENSG00000138443.17	novel	1567	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_4	221.37154147496	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCTTGTTAACTTATTT	26	False	NA	19	True	AATAAA	-20	NA	203380357	203432173	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_203380385_203391045_203391144_203394699_203394847_203395655_203395781_203396784_203396968_203402575_203402735_203416907_203417082_203427176_203427270_203427495
H1_mix_00054784	chr2	+	7559	20	FSM	ENSG00000116117.19	ENST00000613457.4	7559	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	3.81642462953333	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGTCAGAGTCTTGGATTG	NA	False	NA	6	True	AATAAA	-19	NA	204965151	205620162	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_204965324_205047580_205047691_205104425_205104515_205113490_205113578_205118920_205119047_205121590_205121950_205124326_205124467_205125608_205125738_205172210_205172382_205176444_205176578_205185763_205185864_205193204_205193321_205245777_205245823_205300529_205300737_205301463_205301702_205401012_205401124_205440369_205440673_205499895_205500032_205553323_205553404_205615455
H1_mix_00054785	chr2	+	2633	9	ISM	ENSG00000118257.17	ENST00000357118.8	3367	16	-815	33458	-55	0	5prime_fragment	FALSE	canonical	3	141	junction_4	12.3332629502496	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGCCAGGCACTGTGC	-8	True	NA	12	True	AATAAA	-23	NA	205682444	205743698	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_205683364_205697543_205697722_205716192_205716375_205722477_205722709_205723784_205723941_205725912_205726083_205727890_205728047_205740518_205740664_205743202
H1_mix_00054786	chr2	+	6530	18	NIC	ENSG00000118257.17	novel	6662	17	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	2	17	junction_16	48.9141610958355	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTCTGCATCGTGGTT	-8	True	NA	8	True	AATAAA	-15	NA	205682444	205798131	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_205682906_205683090_205683364_205697543_205697722_205716192_205716375_205722477_205722709_205723784_205723941_205725912_205726083_205727890_205728047_205740518_205740664_205743202_205743553_205745745_205745891_205749724_205749842_205752834_205752976_205763673_205763937_205765473_205765571_205766782_205766819_205792234_205792286_205794753
H1_mix_00054788	chr2	+	9854	3	FSM	ENSG00000204186.10	ENST00000611847.1	9890	3	36	0	36	0	multi-exon	FALSE	canonical	3	4	junction_1	4.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGTCTGTTCTCTCTT	NA	False	NA	15	True	ATTAAA	-6	NA	206292098	206314424	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_206292117_206297245_206297374_206304716
H1_mix_00054790	chr2	+	4336	8	ISM	ENSG00000144410.5	ENST00000272852.4	1245	9	10099	-3241	10099	3241	3prime_fragment	FALSE	canonical	1	5	junction_1	1.45686271816937	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTTACACCACCCCAGT	NA	False	NA	NA	False	ATTAAA	-6	NA	206949616	206972715	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_206949714_206955462_206955565_206958300_206958406_206959630_206959742_206960851_206960943_206962411_206962615_206968262_206968348_206969173
H1_mix_00054792	chr2	+	2124	9	FSM	ENSG00000163249.13	ENST00000650811.1	2124	9	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	41.6713330720293	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCTAGCCTCAGCCACAC	154	False	NA	NA	False	NA	NA	NA	207711795	207754742	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_207712117_207724799_207724875_207726841_207726877_207737410_207737447_207740654_207740707_207742222_207742343_207747046_207747214_207750956_207751120_207753587
H1_mix_00054793	chr2	+	9368	39	NIC	ENSG00000115020.17	novel	9908	42	NA	NA	0	9	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	16.8696321102336	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTGAATCTGCTTGAAGA	22	False	NA	38	True	AATAAA	-42	NA	208266362	208358755	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_208266416_208271510_208271692_208285725_208285934_208288728_208288819_208298640_208298780_208300936_208301095_208302241_208302354_208304170_208304319_208304845_208305014_208312235_208312296_208314293_208314424_208315192_208315374_208317866_208317942_208320251_208320360_208324141_208324283_208324910_208325038_208325269_208326430_208328179_208328281_208329841_208329914_208330522_208330695_208333314_208333494_208335305_208335420_208335792_208335902_208336045_208336201_208336837_208336929_208338507_208338569_208339417_208339556_208340010_208340132_208342553_208342650_208345110_208345195_208346049_208346148_208347858_208348024_208350023_208350084_208350770_208350948_208351351_208351456_208352653_208352783_208353897_208354160_208354570_208354646_208355189
H1_mix_00054794	chr2	+	669	1	FSM	ENSG00000229670.2	ENST00000426801.1	2158	1	-238	1727	-238	-1727	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCTTCGAAATCTCTTTT	NA	False	NA	NA	False	NA	NA	NA	209178727	209179396	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_209178700_209179400
H1_mix_00054795	chr2	+	2252	15	FSM	ENSG00000078018.21	ENST00000199940.10	2241	15	-11	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	7.87562760699626	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTAGTAATTGTTACAATT	-34	True	NA	NA	False	AATAAA	-17	NA	209424046	209730518	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_209424277_209507591_209507642_209580035_209580101_209625052_209625130_209653141_209653433_209678571_209678686_209680749_209680828_209700276_209700339_209704449_209704621_209705579_209705728_209709913_209710255_209723594_209723688_209725708_209725791_209729849_209729963_209730181
H1_mix_00054796	chr2	+	902	6	FSM	ENSG00000078018.21	ENST00000471619.5	967	6	65	0	15	0	multi-exon	FALSE	canonical	1	1	junction_1	9.52050418832953	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAACACATATTTGCTGC	8	True	NA	NA	False	NA	NA	NA	209661529	209710264	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_209661679_209678571_209678686_209680749_209680828_209700276_209700339_209705579_209705728_209709913
H1_mix_00054797	chr2	+	309	1	FSM	ENSG00000237194.1	ENST00000428587.1	777	1	210	258	210	-258	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGCCTGCGAAACCTGCGG	290	False	NA	NA	False	AAGAAA	-25	NA	209809013	209809322	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_209809000_209809300
H1_mix_00054798	chr2	+	3359	5	NNC	ENSG00000144451.20	novel	2352	18	NA	NA	47813	-22892	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	11.7127067751225	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCACTGTCTTTTTATAAT	NA	False	NA	14	True	AATAAA	-24	NA	213343876	213399630	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_213343898_213350527_213350646_213364075_213364146_213375009_213375120_213396590
H1_mix_00054800	chr2	+	6479	3	Intergenic	novelGene_761	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_2	5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACACTGAGCAATTGCCA	NA	False	NA	NA	False	NA	NA	NA	215922302	215933302	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_215922904_215924822_215924925_215927526
H1_mix_00054801	chr2	+	1723	2	Intergenic	novelGene_763	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	34	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAAGGAATACAATTATG	NA	False	NA	12	True	CATAAA	-23	NA	215922662	215929148	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_215922904_215927666
H1_mix_00054802	chr2	+	584	3	FSM	ENSG00000163449.11	ENST00000433112.5	584	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	6	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGACATCCATGTCACAT	NA	False	NA	NA	False	AAAAAG	-9	NA	216081865	216099998	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_216081974_216095837_216096235_216099919
H1_mix_00054804	chr2	+	3722	23	FSM	ENSG00000079246.16	ENST00000392133.7	3761	23	39	0	39	0	multi-exon	FALSE	canonical	1	1	junction_1	1455.23471240272	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTGTCTGCAAAAGACTT	NA	False	NA	54	True	ATTAAA	-38	NA	216107502	216206303	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_216107533_216107652_216107699_216109090_216109458_216113015_216113130_216116658_216116843_216117745_216117795_216119042_216119166_216122061_216122254_216125916_216126032_216127535_216127675_216130874_216130988_216132324_216132388_216137087_216137226_216138088_216138180_216141185_216141320_216148082_216148277_216160067_216160162_216161978_216162049_216190224_216190335_216192638_216192736_216194918_216194987_216204321_216204397_216205187
H1_mix_00054805	chr2	+	3725	22	ISM	ENSG00000079246.16	ENST00000392133.7	3761	23	146	10	146	0	3prime_fragment	FALSE	canonical	2	2	junction_1	1104.22700720763	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGCTAATTATTGTCTG	NA	False	NA	44	True	ATTAAA	-28	NA	216107609	216206293	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_216107699_216109090_216109458_216113015_216113130_216116658_216116843_216117745_216117795_216119042_216119166_216122061_216122254_216125916_216126032_216127535_216127675_216130874_216130988_216132324_216132388_216137087_216137226_216138088_216138180_216141185_216141320_216148082_216148277_216160067_216160162_216161978_216162049_216190224_216190335_216192638_216192736_216194918_216194987_216204321_216204397_216205187
H1_mix_00054806	chr2	+	2501	21	NNC	ENSG00000079246.16	novel	3379	21	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_12	1128.83428699699	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTGGTTGGTGTATTA	8	True	NA	39	True	TATAAA	-12	NA	216109353	216205423	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_216109458_216113015_216113130_216116658_216116843_216117745_216117795_216119042_216119166_216122061_216122254_216125916_216126032_216127535_216127675_216130874_216130988_216132324_216132388_216137087_216137226_216138088_216138180_216141187_216141320_216148082_216148277_216160067_216160162_216161978_216162049_216190224_216190335_216192638_216192736_216194918_216194987_216204321_216204397_216205187
H1_mix_00054807	chr2	+	3385	22	NIC	ENSG00000079246.16	novel	3379	21	NA	NA	76	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	1482.5742137646	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGCTAATTATTGTCTG	29	False	NA	44	True	ATTAAA	-28	NA	216109426	216206293	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_216109458_216110466_216110552_216113015_216113130_216116658_216116843_216117745_216117795_216119042_216119166_216122061_216122254_216125916_216126032_216127535_216127675_216130874_216130988_216132324_216132388_216137087_216137226_216138088_216138180_216141185_216141320_216148082_216148277_216160067_216160162_216161978_216162049_216190224_216190335_216192638_216192736_216194918_216194987_216204321_216204397_216205187
H1_mix_00054809	chr2	+	2244	2	FSM	ENSG00000197756.10	ENST00000487233.1	2225	2	-19	0	0	0	multi-exon	FALSE	canonical	3	9016	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAAATTGCCTTGGCTTG	11	False	NA	10	True	AATAAA	-16	NA	216498824	216501460	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_216498878_216499269
H1_mix_00054811	chr2	+	2558	3	FSM	ENSG00000180871.8	ENST00000318507.7	2853	3	283	12	283	-12	multi-exon	FALSE	canonical	0	0	junction_1	0.5	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGGTGTTTATATTACTG	9	True	NA	-5	True	AATAAA	-10	NA	218126310	218137239	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_218126354_218129313_218129366_218134776
H1_mix_00054812	chr2	+	1628	9	FSM	ENSG00000144580.14	ENST00000627282.2	1621	9	-7	0	-7	0	multi-exon	FALSE	canonical	1	2	junction_5	172.757009626238	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGGTGTCAACACCAGCA	-48	True	NA	NA	False	NA	NA	NA	218568572	218594526	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_218568979_218580560_218580741_218582970_218583087_218584611_218584722_218587304_218587401_218587585_218587696_218592303_218592403_218592615_218592708_218594107
H1_mix_00054813	chr2	+	2569	7	NIC	ENSG00000074582.15	novel	2015	8	NA	NA	-8	0	intron_retention	FALSE	canonical	3	13	junction_4	58.9962334014262	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGCTCTCTCATCTCC	20	True	NA	13	True	AATAAA	-13	NA	218659728	218663441	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662514_218662680_218662882_218663001_218663133
H1_mix_00054817	chr2	+	1210	3	FSM	ENSG00000135929.9	ENST00000466602.1	1210	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	77.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAAGTGGTGGGTGTGGTGC	-5	True	NA	NA	False	NA	NA	NA	218782173	218814091	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_218782438_218812221_218813097_218814020
H1_mix_00054819	chr2	+	1781	3	FSM	ENSG00000144567.11	ENST00000420189.1	1781	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	65	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGCTTTCTTAAGAAGTC	1556	False	NA	21	True	CATAAA	-34	NA	219181677	219183800	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219181776_219182012_219182309_219182413
H1_mix_00054821	chr2	+	597	2	FSM	ENSG00000115661.14	ENST00000491697.1	579	2	-18	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATCTGTCAAGTGCAGAG	NA	False	NA	62	True	NA	NA	NA	219245454	219246424	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219245523_219245895
H1_mix_00054822	chr2	+	2868	8	FSM	ENSG00000115661.14	ENST00000409638.7	2868	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	9.73946317089104	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGCAGCTGCTTTATTC	NA	False	NA	3	True	AATAAA	-15	NA	219245454	219250337	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219245523_219245895_219246086_219246656_219246877_219247112_219247247_219247414_219247536_219247661_219247758_219248192_219248315_219248420
H1_mix_00054823	chr2	+	1489	7	FSM	ENSG00000115661.14	ENST00000409260.5	1493	7	4	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	16.0770713198089	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGTTGGTGTAGATCTT	393	False	NA	5	True	AATAAA	-6	NA	219245895	219248891	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219246086_219246521_219246877_219247112_219247247_219247414_219247536_219247661_219247758_219248192_219248315_219248420
H1_mix_00054824	chr2	+	3090	9	FSM	ENSG00000135924.17	ENST00000336576.10	3072	9	-18	0	0	0	multi-exon	FALSE	canonical	3	20	junction_7	5.17052946998661	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGTGGTGTGTTGTGTT	-21	True	NA	14	True	AATAAA	-15	NA	219279347	219286895	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219279519_219279797_219279899_219280577_219280688_219281717_219281772_219281938_219282062_219282836_219282930_219283132_219283236_219283418_219283490_219284631
H1_mix_00054825	chr2	+	672	5	FSM	ENSG00000135924.17	ENST00000442681.5	686	5	14	0	13	0	multi-exon	FALSE	canonical	3	23	junction_1	5.3619026473818	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGAGCTTCAGAACCGGG	76	False	NA	NA	False	NA	NA	NA	219279529	219282852	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219279899_219280577_219280688_219281717_219281772_219281938_219282062_219282836
H1_mix_00054826	chr2	+	2036	9	ISM	ENSG00000135924.17	ENST00000392086.8	1946	10	186	3	13	0	3prime_fragment	FALSE	canonical	3	20	junction_6	4.91012983535059	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGTGGTGTGTTGTGTT	76	False	NA	14	True	AATAAA	-15	NA	219279529	219286895	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_+_219279899_219280577_219280688_219281717_219281772_219281938_219282062_219282836_219282930_219283132_219283236_219283418_219283490_219284631_219284836_219285986
H1_mix_00054827	chr2	+	3063	11	NIC	ENSG00000072195.15	novel	3379	11	NA	NA	1	-7	combination_of_known_splicesites	TRUE	canonical	0	0	junction_5	29.857159945313	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTACCTATCTGGTGTGTT	117	False	NA	3	True	AATAAA	-8	NA	219442023	219466853	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_219442084_219443107_219443151_219444029_219444060_219444652_219444743_219444824_219444985_219447973_219449272_219451135_219451280_219461881_219462058_219462297_219462387_219464432_219464609_219466056
H1_mix_00054828	chr2	+	3258	12	NIC	ENSG00000072195.15	novel	3379	11	NA	NA	1	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_5	27.1932174333999	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGGTGTGTTGTGTTTT	117	False	NA	10	True	AATAAA	-15	NA	219442023	219466860	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_219442084_219443107_219443151_219444024_219444060_219444652_219444743_219444824_219444985_219447973_219449272_219451135_219451280_219451624_219451808_219461881_219462058_219462297_219462387_219464432_219464609_219466056
H1_mix_00054829	chr2	+	405	2	FSM	ENSG00000286095.3	ENST00000475104.1	408	2	0	3	0	-3	multi-exon	FALSE	canonical	1	2	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCGCGTCTGTCCTGCTCT	1560	False	NA	NA	False	AATAAA	-15	NA	219497690	219498284	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219497862_219498050
H1_mix_00054831	chr2	+	343	1	FSM	ENSG00000269068.1	ENST00000597192.1	544	1	51	150	51	-150	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGATCCGCACTGGGGGT	6360	False	NA	NA	False	NA	NA	NA	219559133	219559476	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219559100_219559500
H1_mix_00054833	chr2	+	880	6	FSM	ENSG00000144589.22	ENST00000413891.5	880	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	38.5663065382206	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGCCTCTGAGAAGGTGC	NA	False	NA	NA	False	NA	NA	NA	219612042	219615202	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219612059_219613127_219613226_219613751_219613931_219614160_219614243_219614475_219614872_219615093
H1_mix_00054834	chr2	+	4267	23	FSM	ENSG00000114923.17	ENST00000273063.10	4246	23	-21	0	-21	0	multi-exon	TRUE	canonical	3	5	junction_5	15.9594657007854	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTTGGTTTCATCTTTG	27	False	NA	33	True	NA	NA	NA	219627543	219641980	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_219627746_219627959_219628044_219628404_219628571_219629143_219629422_219629579_219629696_219630071_219630353_219631967_219632117_219632261_219632443_219632873_219633010_219633273_219633458_219633879_219633980_219634419_219634605_219635270_219635497_219635672_219635892_219636301_219636451_219636679_219636875_219637580_219637812_219638163_219638254_219638702_219638870_219639481_219639736_219640429_219640600_219640788_219640963_219641650
H1_mix_00054838	chr2	+	201	1	Intergenic	novelGene_768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCACACTTCAACCTCTC	4254	False	NA	NA	False	NA	NA	NA	224225748	224225949	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_224225700_224225900
H1_mix_00054839	chr2	+	7382	8	NIC	ENSG00000144468.17	novel	5061	9	NA	NA	-247	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	48.0131784630267	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGCTCATTTATACTGT	NA	False	NA	NA	False	AATAAA	-23	NA	226835333	226999210	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_226837771_226839408_226839628_226864603_226865127_226867185_226867319_226906792_226906882_226908821_226908879_226914207_226914352_226995430
H1_mix_00054842	chr2	+	660	2	FSM	ENSG00000168958.20	ENST00000477362.1	660	2	0	0	0	0	multi-exon	FALSE	canonical	3	614	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTCTGTCTCTGCATT	3072	False	NA	27	True	TATAAA	-16	NA	227355297	227357181	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_227355762_227356985
H1_mix_00054846	chr2	+	3370	26	FSM	ENSG00000173692.14	ENST00000676818.1	3370	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	404.405440121668	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCTCCAGATGGACAAGAC	NA	False	NA	8	True	AATAAA	-6	NA	231056844	231172741	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231153563_231153667_231161339_231161510_231163634_231163728_231165199_231165287_231165870_231166018_231166380_231166492_231170565_231170722_231172534
H1_mix_00054847	chr2	+	3174	24	FSM	ENSG00000173692.14	ENST00000677259.1	3174	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	315.198626128103	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCCAGATGGACAAGACAT	NA	False	NA	10	True	AATAAA	-8	NA	231056844	231172743	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231153563_231153667_231161339_231161510_231163634_231163728_231165870_231166018_231170565_231170722_231172534
H1_mix_00054848	chr2	+	3203	24	FSM	ENSG00000173692.14	ENST00000619128.5	3199	24	-4	0	0	0	multi-exon	FALSE	canonical	1	18	junction_17	310.696412707912	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCCCACACCATGAAATGC	NA	False	NA	12	True	AATAAA	-12	NA	231056844	231172802	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231153563_231153667_231161339_231161510_231163634_231163728_231165199_231165287_231165870_231166018_231170565_231170722_231172534
H1_mix_00054850	chr2	+	2415	21	NIC	ENSG00000135931.19	novel	2397	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_3	76.6928288694582	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTATCTCTTTATTTTT	13	True	NA	16	True	AATAAA	-17	NA	231198671	231345199	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_231198946_231206197_231206290_231208126_231208253_231214833_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231331792_231331898_231344974
H1_mix_00054851	chr2	+	2168	11	NIC	ENSG00000135931.19	novel	2128	12	NA	NA	-5	140	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	110.901036965395	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTCTGCAGTTGTCTTT	33	True	NA	NA	False	AATAAA	-18	NA	231198691	231260144	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_231198946_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231256585_231256621_231258990_231259103_231259198
H1_mix_00054855	chr2	+	5745	28	NIC	ENSG00000204120.16	novel	7816	29	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	31.101188893952	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGATTGTATTCTATCTGA	10	True	NA	7	True	AATAAA	-18	NA	232697342	232858612	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_232697393_232735154_232735239_232747614_232747745_232748986_232749083_232756222_232756335_232760479_232760592_232761395_232761437_232787149_232787330_232790697_232790916_232791007_232791171_232791257_232791447_232794747_232794945_232796061_232796222_232806490_232806658_232809719_232809812_232811243_232811352_232812390_232812492_232815636_232815738_232816870_232817033_232819826_232819986_232832856_232833094_232839848_232839972_232844045_232844256_232844368_232844575_232845731_232845887_232847347_232847572_232850261_232850410_232856792
H1_mix_00054870	chr2	+	1937	11	NIC	ENSG00000124831.19	novel	4092	24	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	3	102	junction_1	216.607040513461	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAGCAATGTGGTTCTA	7	True	NA	15	True	ATTAAA	-17	NA	237627612	237780309	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_+_237627741_237748363_237748400_237749198_237749325_237753308_237753480_237756094_237756188_237760063_237760206_237769942_237769993_237772080_237772199_237772865_237772946_237774357_237774463_237779421
H1_mix_00054881	chr2	+	2590	18	FSM	ENSG00000006607.14	ENST00000373287.8	2580	18	-12	2	0	-2	multi-exon	FALSE	canonical	0	0	junction_17	19.1001730095971	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTATCATACTGTAGTCAT	-5	True	NA	4	True	AATATA	-20	NA	241356284	241466028	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241356389_241373083_241373291_241403827_241403933_241404798_241404842_241407536_241407616_241411032_241411131_241413306_241413422_241417961_241418110_241431678_241431775_241434157_241434322_241434961_241435031_241436480_241436539_241441303_241441557_241456746_241456923_241462522_241462613_241463334_241463469_241463898_241463981_241465459
H1_mix_00054885	chr2	+	1925	4	NNC	ENSG00000176720.6	novel	2626	5	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	71.9073477933004	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGAATGTCACTGTGTGT	1	True	NA	22	True	AATAAA	-28	NA	241558744	241574131	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_+_241558994_241570124_241570289_241572296_241572854_241573176
H1_mix_00054888	chr2	+	2211	4	FSM	ENSG00000168397.17	ENST00000475693.1	2237	4	26	0	26	0	multi-exon	FALSE	canonical	3	578	junction_3	35.2230984819148	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAACCTTGTGTCTAT	62	False	NA	66	True	NA	NA	NA	241668284	241673849	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_+_241668686_241670725_241670783_241671311_241671406_241672190
H1_mix_00054892	chr2	-	471	2	FSM	ENSG00000184731.6	ENST00000461026.1	471	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTATGTGCCCCTTTTGA	NA	False	NA	-19	True	AATAAA	-18	NA	46870	41220	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_41628_46806
H1_mix_00054893	chr2	-	2141	10	NIC	ENSG00000035115.22	novel	1279	11	NA	NA	56	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_6	81.8410081639025	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCAATTTTGTTTTTCT	288	False	NA	-6	True	AATAAA	-25	NA	264512	218143	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_219002_229965_230045_231022_231192_233100_233230_234159_234273_242797_242872_247537_247603_249730_249845_253004_253116_264083
H1_mix_00054895	chr2	-	2091	1	FSM	ENSG00000272342.1	ENST00000606068.1	577	1	-1516	2	-1516	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCACCTGTCACTTTGG	NA	False	NA	NA	False	AATAAA	-17	NA	741680	739589	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_739600_741700
H1_mix_00054896	chr2	-	233	1	FSM	ENSG00000271947.1	ENST00000607613.1	578	1	286	59	286	-59	mono-exon	FALSE	NA	NA	NA	NA	NA	366	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTTCAAATATCCTACAA	7897	False	NA	NA	False	NA	NA	NA	6906015	6905782	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_6905800_6906000
H1_mix_00054897	chr2	-	2348	5	FSM	ENSG00000228203.7	ENST00000656329.1	2902	5	0	554	0	3	multi-exon	FALSE	canonical	0	0	junction_2	0.82915619758885	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGCACTTCATAAAAATTT	NA	False	NA	NA	False	NA	NA	NA	6918680	6912307	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_6913665_6914192_6914351_6915822_6915968_6916815_6917225_6918401
H1_mix_00054899	chr2	-	816	6	NIC	ENSG00000119185.13	novel	4153	7	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	41	junction_5	136.825436231718	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCTCAATGAAGTCATCT	19	True	NA	-19	True	ATTAAA	-25	NA	9423480	9406656	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9414177_9414257_9423372
H1_mix_00054900	chr2	-	2209	7	NNC	ENSG00000134308.14	novel	2196	6	NA	NA	0	7632	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1364.81387619949	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACATTTTTCTTCCTGTG	-4	True	NA	NA	False	NA	NA	NA	9630997	9576334	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_9576360_9583978_9585346_9587413_9587510_9588164_9588329_9591391_9591516_9630158_9630535_9630940
H1_mix_00054901	chr2	-	1709	2	Genic_Genomic	ENSG00000260077.1	novel	1572	1	NA	NA	-2111	-6	multi-exon	FALSE	canonical	3	6	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCAGTTTGGGGTCTGGC	322	False	NA	-5	True	AATACA	-18	NA	10042774	10039097	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr2_-_10040665_10042632
H1_mix_00054902	chr2	-	1647	2	Genic_Genomic	ENSG00000260077.1	novel	1572	1	NA	NA	-2726	-6	multi-exon	FALSE	canonical	3	8	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCAGTTTGGGGTCTGGC	NA	False	NA	-5	True	AATACA	-18	NA	10043389	10039097	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr2_-_10040665_10043309
H1_mix_00054903	chr2	-	665	5	FSM	ENSG00000115758.13	ENST00000446285.5	665	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	242.983024098393	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTATTCCCCCATCTG	208	False	NA	NA	False	NA	NA	NA	10448309	10444094	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_10444268_10444473_10444548_10444930_10445050_10445154_10445265_10448120
H1_mix_00054904	chr2	-	275	1	FSM	ENSG00000206633.1	ENST00000383906.1	136	1	25	-164	25	164	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAATTATTCTCATAGCT	1693	False	NA	NA	False	NA	NA	NA	10446824	10446549	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_10446500_10446800
H1_mix_00054905	chr2	-	3424	20	FSM	ENSG00000115761.16	ENST00000538384.5	3418	20	10	-16	-2	2	multi-exon	FALSE	canonical	2	8	junction_17	55.9077197727998	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACTCCAAGAAAATTTTT	-2	True	NA	NA	False	AATAAA	-31	NA	10689977	10570751	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_10572191_10577635_10577739_10589042_10589291_10589577_10589752_10600852_10600943_10602775_10602875_10603077_10603158_10607184_10607312_10644319_10644373_10654480_10654548_10657741_10657892_10659171_10659251_10662958_10663045_10667217_10667279_10668657_10668724_10671553_10671691_10673519_10673558_10681970_10682070_10684566_10684613_10689795
H1_mix_00054907	chr2	-	1066	2	NIC	ENSG00000272275.1	novel	393	3	NA	NA	0	85	intron_retention	FALSE	canonical	3	33	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATTAAATTAAATGATTAT	NA	False	NA	NA	False	AATAAA	-20	NA	10770058	10767789	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_10768794_10769996
H1_mix_00054908	chr2	-	3437	9	FSM	ENSG00000169016.17	ENST00000542100.5	3450	9	11	2	-5	-2	multi-exon	FALSE	canonical	0	0	junction_3	81.1430064762207	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTCTGGCGTTGGGTCT	NA	False	NA	-2	True	TATAAA	-23	NA	11466166	11444376	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_11446524_11447626_11447775_11450011_11450127_11451650_11451807_11453581_11453799_11455341_11455475_11457178_11457234_11458280_11458352_11465771
H1_mix_00054909	chr2	-	7209	51	NIC	ENSG00000151779.13	novel	7278	52	NA	NA	30	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_49	28.1274527819353	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGCAAGCTGCCGCTTT	19	True	NA	-29	True	AATAAA	-14	NA	15561304	15166917	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_15167324_15178987_15179117_15186741_15186881_15190263_15190404_15218772_15218969_15232421_15232512_15234544_15234748_15238467_15238687_15275483_15275819_15276850_15277102_15287072_15287184_15292536_15292767_15308215_15308354_15309170_15309248_15327749_15327871_15328198_15328313_15330597_15330766_15351991_15352082_15353552_15353711_15356302_15356417_15366579_15366694_15374607_15374721_15379601_15379832_15383214_15383318_15394226_15394350_15396412_15396476_15402167_15402302_15415545_15415720_15417526_15417713_15424314_15424469_15427710_15427795_15461200_15461338_15461686_15461792_15467328_15467408_15467663_15467805_15468381_15468534_15473221_15473348_15474066_15474325_15475686_15475881_15478225_15478290_15488893_15489023_15504144_15504214_15511211_15511351_15534542_15534642_15536417_15536552_15539222_15539357_15551492_15551537_15553425_15553474_15554060_15554139_15558579_15558635_15561187
H1_mix_00054910	chr2	-	496	2	FSM	ENSG00000233718.9	ENST00000641387.2	794	2	71	227	10	64	multi-exon	FALSE	canonical	3	17	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCGTGTTGTGCAGCTG	4566	False	NA	NA	False	NA	NA	NA	15941238	15940120	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_15940352_15940973
H1_mix_00054911	chr2	-	5761	2	Intergenic	novelGene_665	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACCCACTGATATTAACC	NA	False	NA	NA	False	AATACA	-17	NA	16797490	16791624	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_-_16791820_16791924
H1_mix_00054912	chr2	-	243	1	FSM	ENSG00000260331.1	ENST00000565944.1	819	1	-65	641	-65	-641	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGCAGGGATGCTAGAAAC	NA	False	NA	NA	False	NA	NA	NA	18548269	18548026	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_18548000_18548300
H1_mix_00054914	chr2	-	1068	1	FSM	ENSG00000235411.1	ENST00000438989.1	1155	1	244	-157	244	157	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTCACCTTGTATGTC	NA	False	NA	NA	False	NA	NA	NA	20240802	20239734	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_20239700_20240800
H1_mix_00054915	chr2	-	6305	21	NNC	ENSG00000055917.16	novel	6309	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_5	116.455688998005	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTCTTGTGTTTTTCTC	-10	True	NA	-10	True	AATAAA	-1	NA	20350834	20248736	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_20251717_20253821_20254015_20254862_20254985_20255215_20255342_20256032_20256171_20258236_20258372_20260336_20260467_20263192_20263461_20278582_20278820_20282946_20283232_20283342_20283487_20290651_20290791_20294375_20294519_20297552_20297679_20307977_20308072_20308313_20308585_20311493_20311664_20312235_20312424_20318536_20318646_20327309_20327379_20350596
H1_mix_00054916	chr2	-	5295	22	NIC	ENSG00000055917.16	novel	6309	21	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_20	123.906701789287	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTATGAAAATATTTTGG	-8	True	NA	-13	True	ATTAAA	-17	NA	20350832	20249863	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_20251717_20253821_20254015_20254862_20254985_20255215_20255342_20256032_20256171_20258242_20258372_20260336_20260467_20263192_20263461_20278582_20278820_20282946_20283232_20283342_20283487_20290651_20290791_20294375_20294519_20297552_20297679_20307977_20308072_20308313_20308585_20311493_20311664_20312235_20312424_20318536_20318646_20326260_20326386_20327309_20327379_20350596
H1_mix_00054917	chr2	-	2904	8	NNC	ENSG00000118961.15	novel	3917	7	NA	NA	0	25477	intron_retention	FALSE	non_canonical	0	0	junction_1	54.9623247584847	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATTGTTTGAACAAATGG	-1	True	NA	NA	False	NA	NA	NA	20823089	20658536	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_20658564_20685058_20687095_20701569_20701653_20739970_20740206_20774809_20774980_20790254_20790399_20801309_20801466_20823036
H1_mix_00054918	chr2	-	14110	29	FSM	ENSG00000084674.15	ENST00000233242.5	14121	29	11	0	11	0	multi-exon	FALSE	canonical	0	0	junction_6	1.77999082776816	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGAATGTGGCTCATTT	9	False	NA	0	True	AATAAA	-24	NA	21044062	21001428	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_21003335_21004268_21004453_21004560_21004676_21005079_21012652_21013159_21013534_21014447_21014594_21015072_21015261_21015369_21015546_21016438_21016650_21018991_21019114_21019722_21019906_21022830_21023043_21023524_21023693_21024932_21025125_21026787_21026965_21027827_21028066_21028326_21028539_21029638_21029786_21029897_21030016_21032353_21032582_21033298_21033519_21034815_21034902_21035583_21035709_21037099_21037256_21037957_21038112_21040937_21041084_21042360_21042477_21043512_21043552_21043863
H1_mix_00054919	chr2	-	4883	28	NNC	ENSG00000119778.15	novel	1406	10	NA	NA	7	57818	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.6990459913776	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGGTGTCTACAGGAAT	18	True	NA	NA	False	TATAAA	-9	NA	23927058	23690845	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_23691121_23754178_23754308_23754646_23754775_23757417_23758102_23762208_23762347_23765505_23765629_23782868_23783029_23786041_23786224_23788511_23788648_23798137_23798324_23810315_23810503_23819746_23819883_23823257_23823570_23828848_23828940_23833918_23834079_23857414_23857504_23863380_23863556_23864808_23864925_23867834_23867947_23869662_23869762_23875828_23875905_23880638_23880756_23884764_23884874_23885726_23885830_23887831_23887986_23888349_23888400_23895818_23895971_23926554
H1_mix_00054921	chr2	-	1338	6	NNC	ENSG00000115129.14	novel	1635	6	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	67.8745902381738	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGGCACGCGGACTGGGG	375	False	NA	-5	True	AATAAA	-14	NA	24084821	24077432	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_24077859_24079443_24079641_24080818_24081032_24082884_24083153_24084188_24084332_24084730
H1_mix_00054922	chr2	-	6996	29	NIC	ENSG00000198399.16	novel	2066	17	NA	NA	7	-5	combination_of_known_junctions	FALSE	canonical	3	30	junction_11	7.11378010251503	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATATTAGTTGTATTGTGT	3	True	NA	-7	True	ATTAAA	-11	NA	24360501	24238937	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_24242207_24246128_24246321_24246796_24246894_24248628_24248751_24248836_24248883_24252344_24252512_24254366_24254432_24257887_24258094_24261105_24261251_24261560_24261743_24270670_24270769_24271765_24271942_24275712_24275850_24286211_24286352_24293687_24293776_24295663_24295805_24298664_24298815_24299908_24300172_24301153_24301240_24301964_24302103_24303798_24303863_24308616_24308757_24310283_24310381_24310488_24310693_24312211_24312376_24313459_24313524_24315131_24315225_24328051_24328116_24360303
H1_mix_00054923	chr2	-	7188	29	NNC	ENSG00000198399.16	novel	2066	17	NA	NA	-197	-6	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_11	7.91794654888629	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATATTAGTTGTATTGTG	39	True	NA	-8	True	ATTAAA	-10	NA	24360733	24238938	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_24242207_24246128_24246321_24246796_24246894_24248628_24248751_24248836_24248883_24252344_24252512_24254366_24254432_24257887_24258094_24261105_24261251_24261560_24261743_24270670_24270769_24271804_24271942_24275712_24275850_24286211_24286352_24293687_24293776_24295663_24295805_24298664_24298815_24299908_24300172_24301153_24301240_24301964_24302103_24303798_24303863_24308616_24308757_24310283_24310381_24310488_24310693_24312211_24312376_24313459_24313524_24315131_24315225_24328051_24328116_24360303
H1_mix_00054924	chr2	-	4191	23	NIC	ENSG00000138031.15	novel	4950	22	NA	NA	1	251	combination_of_known_junctions	TRUE	canonical	3	23	junction_2	30.3894827392146	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCCACCTTCCCCAATGG	-11	True	NA	NA	False	NA	NA	NA	24920236	24819994	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_24820115_24820383_24820452_24820723_24820849_24821516_24821641_24822510_24822631_24823208_24823356_24824377_24824537_24826044_24826127_24827545_24827609_24827901_24828162_24830708_24830826_24831661_24831750_24834484_24834647_24834793_24834937_24836916_24837046_24838444_24838623_24839872_24840032_24841258_24841387_24841555_24841668_24842253_24842385_24872569_24872720_24918312_24919185_24919682
H1_mix_00054925	chr2	-	1002	4	FSM	ENSG00000138031.15	ENST00000485887.1	1002	4	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_2	24.9131825880731	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGGGGAGTGTCCCGTA	NA	False	NA	NA	False	NA	NA	NA	24823363	24820245	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_24820849_24821516_24821641_24822510_24822631_24823208
H1_mix_00054930	chr2	-	3715	20	NNC	ENSG00000119772.19	novel	3589	19	NA	NA	-62	24862	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	152.599234322422	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCAGGCCCATATCCTG	816	False	NA	NA	False	NA	NA	NA	25252373	25202992	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_25203018_25232975_25234421_25235706_25235826_25236935_25237006_25239129_25239216_25240301_25240451_25240639_25240731_25241561_25241708_25243897_25243983_25244154_25244339_25244539_25244653_25245252_25245333_25246019_25246065_25246159_25246310_25246619_25246777_25247050_25247159_25247590_25247750_25248036_25248253_25249617_25249725_25252193
H1_mix_00054931	chr2	-	2309	18	NIC	ENSG00000138101.20	novel	2420	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	82.2442139402135	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGTGTGTTTGTGACC	NA	False	NA	-17	True	AAAAAG	-7	NA	25673634	25377242	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_25377554_25379289_25379324_25387288_25387379_25388201_25388362_25427534_25427632_25432885_25433000_25433909_25433996_25451547_25451636_25482795_25482874_25531472_25531598_25576837_25577005_25580720_25580827_25596085_25596241_25607235_25607322_25628170_25628385_25639013_25639095_25652593_25652662_25673385
H1_mix_00054932	chr2	-	1771	15	FSM	ENSG00000138101.20	ENST00000485845.5	1988	15	0	217	0	-217	multi-exon	FALSE	canonical	0	0	junction_12	87.820578918797	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTACTTAAAACCAGAGCTT	NA	False	NA	NA	False	NA	NA	NA	25652660	25419318	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_25419536_25427534_25427632_25432885_25433000_25433909_25433996_25451547_25451636_25455404_25455495_25482795_25482874_25531472_25531598_25576837_25577005_25580720_25580827_25596085_25596241_25607235_25607322_25628170_25628385_25639013_25639095_25652593
H1_mix_00054934	chr2	-	1137	1	FSM	ENSG00000272148.1	ENST00000607659.1	480	1	-85	-572	-85	572	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTAACGAGCGAAACTCTA	8661	False	NA	NA	False	NA	NA	NA	27062992	27061855	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27061900_27063000
H1_mix_00054936	chr2	-	3082	19	NNC	ENSG00000138074.15	novel	3213	17	NA	NA	-45	72350	intron_retention	FALSE	non_canonical	0	0	junction_1	285.033634575827	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAAGCTACACTGTCTTC	943	False	NA	NA	False	NA	NA	NA	27211838	27127236	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_27127264_27147590_27147610_27199586_27200580_27200997_27201114_27201349_27201454_27201665_27201848_27201987_27202075_27202812_27202881_27203232_27203346_27203778_27203868_27204460_27204591_27204790_27204932_27205349_27205505_27206025_27206094_27206482_27206535_27206876_27206943_27207257_27207791_27211466_27211534_27211766
H1_mix_00054938	chr2	-	3006	17	NIC	ENSG00000138074.15	novel	2230	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	125	junction_16	179.26402272556	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGCTCCTGTACTGTCT	-2	True	NA	-1	True	AATAAA	-21	NA	27211752	27199586	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_27200580_27200997_27201114_27201349_27201454_27201665_27201848_27201987_27202075_27202812_27202881_27203232_27203346_27203778_27203868_27204460_27204591_27204790_27204932_27205349_27205505_27206025_27206094_27206482_27206535_27206876_27206943_27207257_27207791_27211466_27211534_27211710
H1_mix_00054939	chr2	-	3174	17	FSM	ENSG00000138074.15	ENST00000488743.6	3174	17	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	261.418000707201	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGGCTCCTGTACTGT	635	False	NA	-3	True	AATAAA	-19	NA	27212146	27199588	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27199838_27200104_27200580_27200997_27201114_27201349_27201454_27201665_27201848_27201987_27202075_27202812_27203346_27203778_27203868_27204460_27204591_27204790_27204932_27205349_27205505_27206025_27206094_27206482_27206535_27206876_27206943_27207257_27207791_27211466_27211534_27212019
H1_mix_00054940	chr2	-	3146	17	NNC	ENSG00000138074.15	novel	3213	17	NA	NA	1	-2	intron_retention	FALSE	canonical	3	101	junction_10	244.312356101262	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTTGGGCTCCTGTACT	18	True	NA	-5	True	AATAAA	-17	NA	27212267	27199590	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_27200580_27200997_27201114_27201349_27201454_27201665_27201848_27201987_27202075_27202812_27202881_27203232_27203346_27203778_27203868_27204460_27204591_27204790_27204932_27205411_27205505_27206025_27206094_27206482_27206535_27206876_27206943_27207257_27207791_27211466_27211534_27212019
H1_mix_00054942	chr2	-	631	4	FSM	ENSG00000115204.15	ENST00000620797.4	624	4	0	-7	0	7	multi-exon	FALSE	canonical	1	11	junction_3	207.589873441735	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAATGAGTAAGTTTTTA	NA	False	NA	2	True	ATTAAA	-22	NA	27312453	27309484	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27309982_27311898_27311952_27312213_27312247_27312405
H1_mix_00054944	chr2	-	3237	20	NNC	ENSG00000115207.14	novel	3882	19	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_19	112.372648755672	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGTATCTGCATGAAGGCT	10	True	NA	3	True	NA	NA	NA	27356758	27326293	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_27326894_27327176_27327285_27328036_27328190_27328467_27328597_27328843_27328932_27329120_27329283_27329378_27329524_27333654_27333785_27333973_27334000_27335597_27335707_27335916_27336029_27336197_27336426_27337243_27337343_27337480_27337559_27337925_27338021_27341947_27342234_27342825_27343148_27343307_27343579_27350313_27350390_27356738
H1_mix_00054947	chr2	-	749	1	FSM	ENSG00000213453.3	ENST00000394290.3	584	1	-7	-158	-7	158	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTCCCCCCCCCCAAAAAA	203	False	NA	-4	True	AATAAA	-12	NA	27393374	27392625	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_27392600_27393400
H1_mix_00054948	chr2	-	1703	8	NNC	ENSG00000115226.10	novel	1612	7	NA	NA	-59	51885	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	91.6931439806773	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATCCCTTTGGAAATAA	13	False	27495272	NA	False	NA	NA	NA	27495259	27439997	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_27440033_27491885_27492479_27492665_27492791_27493388_27493479_27493929_27494135_27494350_27494467_27494546_27494704_27494877
H1_mix_00054950	chr2	-	2640	22	NIC	ENSG00000162949.16	novel	2683	23	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	5.48591269482464	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTCTCATTCATATTCTG	16	True	NA	-12	True	AATAAA	-17	NA	30807415	30722770	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_30723237_30730729_30730787_30731343_30731400_30732437_30732567_30734448_30734525_30736502_30736572_30738234_30738294_30738399_30738458_30741907_30741965_30742325_30742360_30743382_30743580_30751102_30751252_30753052_30753199_30754289_30754365_30758045_30758138_30763081_30763157_30764131_30764307_30770312_30770450_30775929_30776046_30777566_30777640_30787127_30787358_30807301
H1_mix_00054951	chr2	-	1361	7	NIC	ENSG00000162961.14	novel	637	7	NA	NA	0	237	combination_of_known_junctions	FALSE	canonical	3	15	junction_2	788.243969564979	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGCCTCCTTTGCTGTGA	13	True	NA	-7	True	NA	NA	NA	32039793	32011648	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_32012053_32023421_32023475_32023676_32024257_32029593_32029737_32039278_32039327_32039420_32039493_32039732
H1_mix_00054952	chr2	-	200	3	Antisense	novelGene_ENSG00000230876.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGCAGCAGTGCCTCCT	NA	False	NA	NA	False	NA	NA	NA	32866991	32815222	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_-_32815254_32866746_32866814_32866889
H1_mix_00054953	chr2	-	2564	3	FSM	ENSG00000119812.20	ENST00000475122.1	1032	3	50	-1582	50	-245	multi-exon	FALSE	canonical	3	695	junction_2	14.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTTATCAAAAGAGAAATT	8807	False	NA	NA	False	TATAAA	-3	NA	33586819	33583306	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_33585445_33585529_33585698_33586561
H1_mix_00054954	chr2	-	214	1	FSM	ENSG00000264352.2	ENST00000578326.2	324	1	-60	170	-60	-170	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34809616	34809402	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_34809400_34809600
H1_mix_00054955	chr2	-	606	2	Intergenic	novelGene_671	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	NA	False	NA	-7	True	AATAAA	-16	NA	35442275	35436964	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_-_35437332_35442036
H1_mix_00054956	chr2	-	3657	2	FSM	ENSG00000171055.15	ENST00000475815.5	4495	2	838	0	220	0	multi-exon	FALSE	canonical	3	70	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTTTGAGAGCCTTAT	3262	False	NA	-20	True	AATAAA	-19	NA	36558417	36552257	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_36553180_36555682
H1_mix_00054957	chr2	-	8034	18	NNC	ENSG00000115808.12	novel	14174	18	NA	NA	-28	5608	intron_retention	FALSE	canonical	1	3	junction_3	25.0858732768521	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGCTATAGGTGTCTCA	137	False	NA	-9	True	AATAAA	-17	NA	36966499	36843797	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_36849626_36849713_36849801_36850999_36851105_36855211_36855353_36857855_36858024_36861131_36861254_36867813_36867862_36869553_36869730_36877890_36878028_36883931_36884076_36886715_36886827_36893897_36894034_36899522_36899659_36902583_36902752_36905539_36905619_36916077_36916152_36925104_36925209_36966229
H1_mix_00054958	chr2	-	604	2	Antisense	novelGene_ENSG00000232973.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	0	81	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	15	False	NA	-4	True	ATTAAA	-17	NA	38086203	38080841	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr2_-_38081209_38085966
H1_mix_00054962	chr2	-	2448	5	ISM	ENSG00000115904.15	ENST00000461545.2	1608	9	-582	18914	20	153	5prime_fragment	FALSE	canonical	3	60	junction_4	12.913171570145	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACTGCATGGTTTCTAAA	2	True	NA	-3	True	ATTAAA	-29	NA	39121031	39053494	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_39054824_39056701_39056867_39058672_39058805_39067627_39067754_39120335
H1_mix_00054963	chr2	-	574	1	FSM	ENSG00000273035.1	ENST00000609671.1	477	1	18	-115	18	115	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAGGTAAAATAAAGGA	NA	False	NA	NA	False	TATAAA	-20	NA	39323786	39323212	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_39323200_39323800
H1_mix_00054964	chr2	-	21017	8	FSM	ENSG00000183023.18	ENST00000406785.6	20987	8	-228	198	-228	-198	multi-exon	FALSE	canonical	1	3	junction_7	2.24971653543195	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGGTATGTTAATATCAAAA	1246	False	NA	NA	False	NA	NA	NA	40452297	40097467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_40115630_40139400_40139677_40160764_40160865_40164853_40164985_40174824_40174843_40177751_40177856_40428472_40430305_40451903
H1_mix_00054965	chr2	-	395	3	FSM	ENSG00000115944.15	ENST00000468711.5	516	3	0	121	0	-121	multi-exon	FALSE	canonical	1	3	junction_1	898.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCTGTGAATCTACCC	63	False	NA	NA	False	NA	NA	NA	42361149	42333666	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_42333870_42353211_42353344_42361089
H1_mix_00054968	chr2	-	2663	24	FSM	ENSG00000138095.20	ENST00000409659.6	2663	24	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	248.001562590357	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGTTTTCCCCAAATTT	15	False	43996004	-28	True	AATAAA	-19	NA	43995989	43942698	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_43942816_43943686_43943895_43945331_43945418_43946112_43946244_43947256_43947371_43947730_43947776_43948121_43948200_43948411_43948519_43949601_43949660_43950572_43950601_43957384_43957452_43960540_43960635_43963587_43963707_43973606_43973715_43973794_43973901_43974149_43974296_43974613_43974759_43975090_43975218_43976142_43976230_43976993_43977053_43977154_43977277_43979825_43979949_43982237_43982435_43995798
H1_mix_00054969	chr2	-	6553	14	NNC	ENSG00000138078.16	novel	5212	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	11	junction_11	68.1557561809105	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTAATTTTATTTTTT	-1	True	NA	-7	True	ATTAAA	-16	NA	44361494	44318762	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343949_44344519_44344587_44346267_44346391_44359496
H1_mix_00054970	chr2	-	2591	2	FSM	ENSG00000259439.3	ENST00000437916.2	2880	2	248	41	-63	-41	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATTCAACAGTCTAATAAT	3684	False	NA	NA	False	NA	NA	NA	44938951	44921117	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_44923580_44938822
H1_mix_00054971	chr2	-	2174	2	NNC	ENSG00000170577.8	novel	2206	2	NA	NA	32	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAAGGCCCGCGGGCCGG	-1	True	NA	-2	True	AATAAA	-34	NA	45009420	45005187	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_45006486_45008544
H1_mix_00054972	chr2	-	1979	2	FSM	ENSG00000250565.7	ENST00000306448.4	1979	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAATTCCAATTCATCCA	11	False	NA	-15	True	AATAAA	-21	NA	46519957	46511846	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_46512813_46518944
H1_mix_00054973	chr2	-	3955	3	FSM	ENSG00000180398.13	ENST00000409800.5	3955	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	364.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGAGCAGTTGATTTTGT	-1	True	NA	-5	True	AATAAA	-16	NA	46916054	46901873	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_46905595_46907809_46907970_46915980
H1_mix_00054975	chr2	-	1968	2	FSM	ENSG00000184261.5	ENST00000493527.1	833	2	-617	-518	53	518	multi-exon	FALSE	canonical	3	25	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTCAGTTTCCCATGTC	17	True	NA	71	True	TATAAA	-28	NA	47570932	47542825	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_47543802_47569940
H1_mix_00054976	chr2	-	604	2	Genic_Genomic	ENSG00000230979.3	novel	531	1	NA	NA	0	50939	multi-exon	FALSE	non_canonical	0	0	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTAAAGAATGAGAGAGAG	37	False	NA	NA	False	AAAAAG	-2	NA	47691246	47639776	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr2_-_47639803_47690668
H1_mix_00054977	chr2	-	3158	5	FSM	ENSG00000138081.22	ENST00000465204.5	3158	5	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_3	24.9098374141623	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTTTGTTTTTTCATAG	NA	False	NA	NA	False	ATTAAA	-16	NA	47811661	47806751	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_47808248_47808328_47808428_47809157_47809267_47809599_47809708_47810315
H1_mix_00054978	chr2	-	848	3	FSM	ENSG00000230773.9	ENST00000661667.1	963	3	0	115	0	-115	multi-exon	FALSE	canonical	0	0	junction_1	0.5	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTTTTTGTTGTTTTTT	1486	False	NA	NA	False	NA	NA	NA	48314185	48242918	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_48243620_48313689_48313765_48314113
H1_mix_00054980	chr2	-	2264	8	NNC	ENSG00000115310.19	novel	4697	9	NA	NA	0	49253	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	488.888451865399	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTATACCCTTTGACCAAC	0	True	NA	NA	False	NA	NA	NA	55050451	54922933	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_54922959_54972189_54973199_54973562_54973622_54973820_54973868_54974694_54974765_54982514_54982654_54987490_54987699_55049744
H1_mix_00054982	chr2	-	5084	11	NIC	ENSG00000162994.16	novel	5330	13	NA	NA	0	-6	combination_of_known_splicesites	FALSE	canonical	1	1	junction_9	10.5565145763173	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGACACTATTATTTA	11	True	NA	NA	False	AATAAA	-17	NA	55232264	55172552	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_55175987_55177601_55177782_55180509_55180713_55181569_55181745_55206269_55206377_55209629_55209832_55212672_55212807_55217810_55217999_55222234_55222494_55228031_55228205_55232235
H1_mix_00054986	chr2	-	6179	19	FSM	ENSG00000115355.18	ENST00000644512.1	6171	19	0	-8	0	1	multi-exon	FALSE	canonical	3	9	junction_3	32.0819263760766	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTTAGTAATCATTTAAAA	5298	False	NA	-33	True	AATAAA	-26	NA	55334327	55287840	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_55291165_55291675_55291776_55295596_55295728_55295949_55296057_55296257_55296524_55301205_55301278_55301871_55302073_55303068_55303153_55308808_55309024_55309161_55309255_55312433_55312580_55315927_55316115_55317205_55317350_55317563_55317842_55318842_55319005_55322527_55322693_55328293_55328436_55332565_55332694_55334093
H1_mix_00054987	chr2	-	9506	33	FSM	ENSG00000115355.18	ENST00000336838.10	9505	33	0	-1	0	1	multi-exon	FALSE	canonical	3	14	junction_17	26.9640964988631	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTTAGTAATCATTTAAAA	328	False	NA	-33	True	AATAAA	-26	NA	55419613	55287840	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_55291165_55291675_55291776_55295596_55296057_55296257_55296524_55299838_55299920_55301205_55301278_55301871_55302073_55303068_55303153_55308808_55309024_55309161_55309255_55312433_55312580_55315927_55316115_55317205_55317350_55317563_55317842_55318842_55319005_55322527_55322693_55328293_55328433_55332565_55332694_55334093_55335165_55336680_55336819_55339463_55339649_55343647_55343793_55344367_55344515_55346174_55346334_55349517_55349600_55355578_55355752_55362307_55362449_55363949_55364034_55372451_55372511_55374813_55374884_55388777_55388887_55418815_55418917_55419016
H1_mix_00054988	chr2	-	6121	32	NIC	ENSG00000115355.18	novel	6958	33	NA	NA	2	0	intron_retention	FALSE	canonical	2	15	junction_1	27.9023121237692	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTAACATTTCCTTTAAA	580	False	NA	51	True	ATTAAA	-23	NA	55419361	55288083	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_55288356_55291675_55291776_55295596_55296057_55296257_55296524_55299838_55299920_55301205_55301278_55301871_55302073_55308808_55309024_55309161_55309255_55312433_55312580_55315927_55316115_55317205_55317350_55317563_55317842_55318842_55319005_55322527_55322693_55328293_55328436_55332565_55332694_55334093_55335165_55336680_55336819_55339463_55339649_55343647_55343793_55344367_55344515_55346174_55346334_55349517_55349600_55355578_55355752_55362307_55362449_55363949_55364034_55372451_55372511_55374813_55374884_55388777_55388887_55418815_55418917_55419016
H1_mix_00054989	chr2	-	4291	2	FSM	ENSG00000115355.18	ENST00000644809.1	4286	2	0	-5	0	0	multi-exon	FALSE	canonical	3	66	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATTAAATACCAAATCAAAT	5958	False	NA	22	True	NA	NA	NA	55292914	55288112	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_55291165_55291675
H1_mix_00054990	chr2	-	4425	4	FSM	ENSG00000115355.18	ENST00000645969.1	4425	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	28.3313724811677	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAACACCCTTCAACAAAA	1707	False	NA	-73	True	GATAAA	-9	NA	55297165	55288207	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_55291165_55291675_55291776_55295596_55296057_55296257
H1_mix_00054992	chr2	-	5591	18	NIC	ENSG00000275052.5	novel	5506	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	120.179997644825	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGATGTTTGTGTTTGG	-6	True	NA	NA	False	ATTAAA	-20	NA	55618880	55548377	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_55550007_55558774_55558969_55564312_55564498_55564901_55565042_55568193_55568364_55573618_55573778_55577314_55577357_55578246_55578343_55579678_55579782_55581566_55581699_55585050_55585168_55586617_55586735_55588878_55588957_55598415_55599040_55603977_55604077_55615450_55615507_55617143_55617979_55618065
H1_mix_00054993	chr2	-	1507	12	NNC	ENSG00000138035.15	novel	583	6	NA	NA	0	8980	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	122.870421566249	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGATCTGTGAAATTGC	14	True	NA	NA	False	AATATA	-19	NA	55693823	55670701	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_55671233_55671318_55671377_55671994_55672047_55672892_55673080_55679681_55679796_55680711_55680760_55680854_55680919_55683784_55683835_55684942_55685049_55686369_55686445_55687644_55687706_55693662
H1_mix_00054994	chr2	-	3529	5	NIC	ENSG00000119866.22	novel	4052	5	NA	NA	0	-6	intron_retention	FALSE	canonical	3	26	junction_1	187.207772274551	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTACCATGCAGGATTTGAA	2041	False	NA	NA	False	AATATA	-12	NA	60553409	60451786	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_60452667_60460401_60462425_60468731_60468834_60545970_60546301_60553215
H1_mix_00054995	chr2	-	950	1	FSM	ENSG00000237522.1	ENST00000414613.1	1231	1	-168	449	-168	-449	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTCATGCTAATGAGGCA	NA	False	NA	NA	False	NA	NA	NA	60938217	60937267	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_60937300_60938200
H1_mix_00054996	chr2	-	3814	18	FSM	ENSG00000162927.14	ENST00000316752.11	4025	18	212	-1	212	0	multi-exon	FALSE	canonical	2	3	junction_10	3.66975857893699	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCCAAGTAAGAAAACCGGT	205	False	NA	NA	False	AATAAA	-19	NA	61018043	60940221	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_60942434_60945008_60945109_60948042_60948186_60952996_60953115_60953932_60953989_60954081_60954159_60955017_60955075_60960391_60960518_60961462_60961549_60962825_60962891_60965057_60965104_60965422_60965485_60967501_60967614_60971522_60971558_61006556_61006644_61008760_61009016_61011764_61011906_61018007
H1_mix_00054997	chr2	-	1818	18	FSM	ENSG00000162927.14	ENST00000407787.5	1820	18	2	0	2	0	multi-exon	FALSE	canonical	2	3	junction_10	3.82307689629928	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTATATTTTGTGTTAAAT	-4	True	NA	NA	False	NA	NA	NA	61017191	60942224	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_60942434_60945008_60945109_60948042_60948186_60952996_60953115_60953932_60953989_60954081_60954159_60955017_60955075_60960391_60960518_60961462_60961549_60962825_60962891_60965057_60965104_60965422_60965485_60967501_60967614_60971522_60971558_61006556_61006644_61008760_61009016_61011764_61011906_61017148
H1_mix_00055001	chr2	-	4549	25	FSM	ENSG00000082898.19	ENST00000677813.1	4549	25	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_24	351.41989515156	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTGTCTAACTCTACT	1545	False	NA	-86	True	NA	NA	NA	61537065	61477688	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61536869
H1_mix_00055002	chr2	-	4660	26	FSM	ENSG00000082898.19	ENST00000676783.1	4660	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	419.795176723125	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTGTCTAACTCTACT	836	False	NA	-86	True	NA	NA	NA	61537774	61477688	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61529065_61529160_61533771_61533904_61537561
H1_mix_00055003	chr2	-	3010	5	FSM	ENSG00000082898.19	ENST00000678640.1	2998	5	0	-12	0	0	multi-exon	FALSE	canonical	3	1456	junction_2	98.6543840891017	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTTATTTTTCCTTTAT	7103	False	NA	-22	True	AATAAA	-8	NA	61485529	61477941	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936
H1_mix_00055004	chr2	-	2424	14	FSM	ENSG00000082898.19	ENST00000451765.6	2424	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	463.025757459567	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTACTTAAAAAGCAAAATAA	1513	False	NA	29	True	NA	NA	NA	61537097	61477969	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61478967_61481184_61481282_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61537018
H1_mix_00055005	chr2	-	1136	5	NNC	ENSG00000115484.15	novel	2261	13	NA	NA	4410	47039	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1361.36409071931	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAAGGCATAAAATGTATG	4775	False	NA	NA	False	AAAAAG	-10	NA	61872616	61821045	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_61821072_61868104_61868707_61869439_61869554_61872081_61872317_61872457
H1_mix_00055006	chr2	-	2016	13	NNC	ENSG00000115484.15	novel	2376	14	NA	NA	0	47039	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1041.18469849921	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAAGGCATAAAATGTATG	-29	True	NA	NA	False	AAAAAG	-10	NA	61888656	61821045	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_61821072_61868104_61868707_61869439_61869554_61873001_61873113_61873196_61873294_61876094_61876235_61876919_61877053_61877392_61877515_61878868_61879012_61880285_61880395_61883458_61883549_61885019_61885073_61888380
H1_mix_00055007	chr2	-	3748	7	NNC	ENSG00000170264.13	novel	3777	7	NA	NA	11	-4	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	20.3913107856154	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTAGATGAATATGGTTT	-8	True	NA	-11	True	AATAAA	-13	NA	61854049	61824859	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_61826600_61827103_61827259_61836009_61836110_61839420_61840582_61842121_61842361_61846758_61846921_61853858
H1_mix_00055008	chr2	-	1702	13	NNC	ENSG00000115484.15	novel	2376	14	NA	NA	0	10476	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1041.18469849921	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGACACAGAGGTCAAAGG	-29	True	NA	NA	False	AAAAAG	-10	NA	61888656	61857608	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_61857641_61868424_61868707_61869439_61869554_61873001_61873113_61873196_61873294_61876094_61876235_61876919_61877053_61877392_61877515_61878868_61879012_61880285_61880395_61883458_61883549_61885019_61885073_61888380
H1_mix_00055009	chr2	-	388	2	FSM	ENSG00000115484.15	ENST00000461370.1	388	2	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGACGAATTGGGTGAAC	169	False	NA	-15	True	AATAAA	-19	NA	61888458	61887947	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_61888258_61888380
H1_mix_00055010	chr2	-	2122	9	FSM	ENSG00000143951.16	ENST00000409354.6	2122	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	27.5124971603815	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAAGAAAGAAAG	9186	False	NA	NA	False	NA	NA	NA	63433930	63121382	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_63122057_63152913_63152946_63153494_63153575_63174669_63174833_63313247_63313312_63378385_63378510_63381905_63382095_63404047_63404658_63433744
H1_mix_00055011	chr2	-	733	1	FSM	ENSG00000233716.1	ENST00000438685.1	1125	1	-70	462	-70	-462	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCTCTCCAGCCTCCA	NA	False	NA	NA	False	NA	NA	NA	63233647	63232914	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_63232900_63233600
H1_mix_00055012	chr2	-	1083	8	NNC	ENSG00000143951.16	novel	847	8	NA	NA	100	-1011	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	37.211475078946	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCGTGTCTCTGAGTTATC	8831	False	NA	-1	True	ATTAAA	-18	NA	63588699	63438467	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_63438624_63439756_63439872_63484603_63484664_63484916_63484988_63486541_63486587_63487446_63487495_63492855_63492941_63588196
H1_mix_00055013	chr2	-	210	1	FSM	ENSG00000260101.1	ENST00000561559.1	1907	1	170	1527	170	-1527	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGGATGGAGAAGGTGGT	1519	False	NA	NA	False	AAGAAA	-21	NA	64523923	64523713	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_64523700_64523900
H1_mix_00055014	chr2	-	1018	2	FSM	ENSG00000179833.4	ENST00000476805.2	1068	2	50	0	50	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCCCACCCCTGCGACCT	97	False	NA	NA	False	NA	NA	NA	64750955	64636532	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_64636876_64750280
H1_mix_00055016	chr2	-	571	5	FSM	ENSG00000236780.7	ENST00000414404.1	571	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	10.6770782520313	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAACATTGTAATAATTGA	94	False	NA	59	True	TTTAAA	-25	NA	67215277	67175422	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_67175700_67177581_67177713_67203115_67203174_67205508_67205564_67215227
H1_mix_00055017	chr2	-	842	4	FSM	ENSG00000197223.12	ENST00000485709.1	842	4	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_3	139.786344906154	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGCAAAATAATTCTGTGG	0	True	NA	NA	False	AAAAAG	-25	NA	68062994	68042831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_68043054_68045987_68046411_68047172_68047320_68062944
H1_mix_00055018	chr2	-	2917	8	NIC	ENSG00000243667.7	novel	2591	8	NA	NA	2	-6	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	47.0648705598595	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCATTTTGCTTTATAAA	-9	True	NA	44	True	AATAAA	-13	NA	68157525	68129810	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_68131446_68134701_68134800_68137298_68137434_68138741_68138858_68141693_68141796_68144584_68144716_68147466_68147568_68156926
H1_mix_00055020	chr2	-	2655	17	FSM	ENSG00000198380.13	ENST00000674438.1	2655	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	163.370935297561	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACTACTTTGTGTTTTCA	177	False	NA	-59	True	TTTAAA	-32	NA	69387130	69325422	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_69326234_69326913_69327076_69328270_69328439_69329296_69329425_69329683_69329799_69337897_69338056_69338444_69338566_69342151_69342250_69345903_69346000_69348170_69348335_69350077_69350184_69354488_69354569_69356495_69356558_69358328_69358464_69359267_69359327_69363544_69363671_69387064
H1_mix_00055021	chr2	-	1052	7	FSM	ENSG00000169599.13	ENST00000394305.5	1058	7	0	6	0	1	multi-exon	FALSE	canonical	3	15	junction_6	155.271804695293	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCATGTTTGCTTTACCT	387	False	NA	-20	True	AATAAA	-30	NA	69437628	69396118	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_69396291_69400363_69400539_69406021_69406083_69415184_69415300_69419537_69419605_69431901_69432006_69437270
H1_mix_00055022	chr2	-	11157	17	FSM	ENSG00000115977.21	ENST00000606389.7	11154	17	0	-3	0	3	multi-exon	FALSE	canonical	2	3	junction_2	4.75657439761011	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTTGTGCAATTTCTTA	683	False	NA	0	True	ATTAAA	-22	NA	69643274	69457993	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_69466552_69495984_69496081_69505568_69505674_69507420_69507579_69509230_69509461_69514470_69514750_69518953_69519241_69520833_69520989_69525032_69525113_69527215_69527320_69530007_69530141_69530624_69530707_69532040_69532163_69542522_69542666_69544435_69544545_69556859_69556979_69642877
H1_mix_00055023	chr2	-	3986	6	FSM	ENSG00000179818.16	ENST00000419542.5	4041	6	66	-11	0	11	multi-exon	FALSE	canonical	1	1	junction_1	20.1950488981829	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCATGTAATGTGTTGA	9099	False	NA	-2	True	AATAAA	-15	NA	70086220	69960092	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_69963501_69988741_69988839_69996685_69996889_70051202_70051306_70085546_70085625_70086123
H1_mix_00055027	chr2	-	563	2	FSM	ENSG00000115998.8	ENST00000447804.1	563	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCAGTTGGCCACGGAAC	-2	True	NA	NA	False	NA	NA	NA	70191017	70181479	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70181998_70190972
H1_mix_00055028	chr2	-	536	2	FSM	ENSG00000115998.8	ENST00000419381.1	536	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGAAAACCAGTGCCAGC	8080	False	NA	NA	False	NA	NA	NA	70182935	70181602	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70181998_70182794
H1_mix_00055031	chr2	-	209	1	FSM	ENSG00000231414.1	ENST00000446011.1	156	1	23	-76	23	76	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACCCCTATCTGGAGAGT	4179	False	NA	NA	False	NA	NA	NA	70253987	70253778	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70253800_70254000
H1_mix_00055032	chr2	-	530	5	FSM	ENSG00000143977.14	ENST00000454893.1	527	5	0	-3	0	0	multi-exon	FALSE	canonical	1	15	junction_2	2017.79748426347	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTCTCAGATGTTCTGA	13	True	NA	-74	True	AATAAA	-20	NA	70293711	70281503	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70281685_70287264_70287372_70288067_70288193_70289349_70289373_70293617
H1_mix_00055033	chr2	-	388	2	FSM	ENSG00000143977.14	ENST00000480370.1	487	2	0	99	0	29	multi-exon	FALSE	canonical	3	302	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGGTTACCTGTAGGTAA	5	True	NA	NA	False	NA	NA	NA	70293719	70287906	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70288193_70293617
H1_mix_00055034	chr2	-	1225	6	FSM	ENSG00000163235.16	ENST00000418333.6	1225	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	4.14728827066554	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAATGATGTATGTGTTG	0	True	NA	NA	False	TATAAA	-18	NA	70553826	70450172	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70450867_70453217_70453328_70456338_70456489_70465615_70465734_70514858_70514913_70553727
H1_mix_00055035	chr2	-	568	4	FSM	ENSG00000163235.16	ENST00000394241.3	568	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	5.18544972870135	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTACTTGCTGCCCCTA	217	False	NA	NA	False	NA	NA	NA	70553973	70456338	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70456489_70465615_70465734_70514858_70514913_70553727
H1_mix_00055036	chr2	-	2654	17	FSM	ENSG00000075340.23	ENST00000355733.7	2654	17	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	43.6247761455575	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCGAACCCCCTCCTTCC	14	True	NA	-50	True	AAAAAG	-3	NA	70768177	70663482	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_70663736_70672877_70673007_70673240_70673327_70674677_70674826_70676795_70676886_70677757_70677878_70678703_70678962_70683590_70683768_70688023_70688123_70690785_70690930_70692402_70692553_70695720_70695802_70696244_70696397_70704320_70704460_70706225_70706443_70713065_70713185_70767885
H1_mix_00055037	chr2	-	758	1	Intergenic	novelGene_692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCCCTAATCATTACTTG	7812	False	NA	NA	False	TATAAA	-16	NA	71084106	71083348	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_-_71083300_71084100
H1_mix_00055038	chr2	-	1354	4	NIC	ENSG00000124370.11	novel	836	2	NA	NA	0	-14	intron_retention	FALSE	canonical	2	9	junction_1	9.17726659862414	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCCTCTTCTACAATGG	1303	False	NA	-28	True	AATAAA	-1	NA	71130214	71109700	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_71110123_71110762_71110859_71124205_71124544_71129716
H1_mix_00055039	chr2	-	3959	13	NIC	ENSG00000144040.13	novel	4016	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	14	junction_12	51.684069649705	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGGTGTGGTTTTGTGAA	-3	True	NA	-2	True	AATAAA	-17	NA	73071724	72942035	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_72945100_72961130_72961249_72968447_72968534_72971569_72971686_72988257_72988349_72998948_72999015_73000430_73000488_73001524_73001579_73020238_73020265_73022521_73022577_73023187_73023215_73040853_73040932_73071603
H1_mix_00055042	chr2	-	817	4	FSM	ENSG00000163013.12	ENST00000520186.1	817	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.85861230093008	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGCCAGAAGGCAACACAA	9345	False	NA	NA	False	NA	NA	NA	73284431	73271196	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_73271511_73272186_73272303_73273014_73273130_73284159
H1_mix_00055043	chr2	-	634	5	NIC	ENSG00000144034.16	novel	816	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	259	junction_4	320.83514068755	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTCCTGACTATAAAACTA	9	True	NA	NA	False	ATTAAA	-17	NA	73737335	73729889	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_73730030_73730559_73730737_73732162_73732286_73734428_73734589_73737301
H1_mix_00055044	chr2	-	504	1	FSM	ENSG00000273245.1	ENST00000608509.1	531	1	-230	257	-230	-257	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCATGAAAGCCCACTTG	594	False	NA	NA	False	NA	NA	NA	73751016	73750512	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_73750500_73751000
H1_mix_00055045	chr2	-	417	1	FSM	ENSG00000280037.1	ENST00000624373.1	513	1	136	-40	136	40	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTTGTTGCCCAGGTTG	NA	False	NA	NA	False	TTTAAA	-21	NA	73761645	73761228	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_73761200_73761600
H1_mix_00055046	chr2	-	4839	7	NNC	ENSG00000114978.18	novel	4896	6	NA	NA	0	77208	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	401.551435753324	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGGCTCTCATGGTCAG	-15	True	NA	NA	False	AAAAAG	-1	NA	74178866	74075319	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_74075346_74152597_74156646_74159090_74159255_74165217_74165352_74167013_74167108_74172585_74172753_74178660
H1_mix_00055047	chr2	-	4116	30	NNC	ENSG00000204843.13	novel	4202	31	NA	NA	0	15209	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	272.750394400558	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTCCAAAGCAGTGCTGG	258	False	NA	NA	False	AGTAAA	-41	NA	74391800	74345944	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_74345966_74352008_74352027_74361157_74361637_74362051_74362142_74362649_74362730_74362993_74363178_74363293_74363428_74365074_74365242_74365514_74365658_74365892_74366019_74366243_74366376_74366458_74366621_74366782_74366933_74367044_74367108_74367351_74367421_74367695_74367865_74367970_74368132_74368727_74368881_74369097_74369215_74369299_74369492_74369964_74370070_74370185_74370346_74370465_74370545_74370620_74370826_74370978_74371177_74371536_74371729_74377431_74377467_74377647_74377727_74377999_74378246_74391793
H1_mix_00055050	chr2	-	3042	15	Fusion	ENSG00000135637.14_ENSG00000115307.17	novel	1458	12	NA	NA	0	4	multi-exon	TRUE	non_canonical	0	0	junction_3	241.716396478457	162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTCTGGAACAAGACTAG	10	True	NA	-46	True	AATAAA	-23	NA	74529685	74471981	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr2_-_74472253_74472357_74472471_74472568_74473790_74526651_74526837_74526940_74527060_74527247_74527364_74527470_74527591_74527735_74527839_74527939_74528007_74528247_74528322_74528416_74528490_74528750_74528936_74529131_74529283_74529361_74529500_74529579
H1_mix_00055051	chr2	-	632	6	FSM	ENSG00000005436.14	ENST00000427862.1	632	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	70.2498398574687	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTACACTCAGTTCCT	NA	False	NA	-32	True	AATAAA	-28	NA	75687892	75664633	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_75664784_75665928_75666054_75670137_75670285_75671949_75672017_75673443_75673521_75687826
H1_mix_00055052	chr2	-	2439	17	NNC	ENSG00000005436.14	novel	4367	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_15	37.9108740996564	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTACACTCAGTTCCT	6	True	NA	-32	True	AATAAA	-28	NA	75710892	75664633	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_75664784_75665928_75666054_75670137_75670285_75671949_75672017_75673443_75673521_75680192_75680315_75687826_75687978_75689025_75689226_75689968_75690082_75690637_75690720_75691976_75692101_75694240_75694428_75696199_75696316_75701189_75701288_75702198_75702448_75706522_75706652_75710590
H1_mix_00055053	chr2	-	3977	4	NNC	ENSG00000176204.14	novel	485	2	NA	NA	0	108	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7.93025150224688	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGATCCTCTTAAAGGC	NA	False	NA	NA	False	NA	NA	NA	77593196	77516559	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_77519865_77521667_77522070_77592814_77593052_77593163
H1_mix_00055054	chr2	-	1771	2	FSM	ENSG00000163541.12	ENST00000484365.1	1765	2	0	-6	0	4	multi-exon	FALSE	canonical	3	307	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGAGGCTTATTATTG	NA	False	NA	-1	True	AATAAA	-23	NA	84426936	84423523	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_84423773_84425414
H1_mix_00055055	chr2	-	394	1	FSM	ENSG00000235847.2	ENST00000398295.3	965	1	148	423	148	-423	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGGGAACGTGGAGATTC	NA	False	NA	NA	False	NA	NA	NA	84778075	84777681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_84777700_84778100
H1_mix_00055057	chr2	-	1241	10	NIC	ENSG00000042493.16	novel	1250	10	NA	NA	26	0	intron_retention	FALSE	canonical	0	0	junction_9	209.449071566925	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTGCCCTGGGCTGATT	8	True	NA	-8	True	AATAAA	-34	NA	85409806	85394752	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_85394959_85395537_85395627_85398019_85398153_85398689_85398783_85399135_85399286_85401164_85401330_85401528_85401684_85401784_85401958_85402122_85402159_85409765
H1_mix_00055058	chr2	-	1706	6	ISM	ENSG00000168890.14	ENST00000306353.7	1484	7	321	-1	39	0	3prime_fragment	FALSE	canonical	3	31	junction_3	39.8276286012612	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTAGCCTGTTCTGGA	20	True	NA	-4	True	ATTAAA	-17	NA	85602377	85598546	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_85599318_85599524_85599703_85599890_85600019_85601020_85601108_85601434_85601483_85601883
H1_mix_00055060	chr2	-	2784	15	NNC	ENSG00000132305.22	novel	2670	15	NA	NA	-117	0	at_least_one_novel_splicesite	FALSE	canonical	1	72	junction_11	209.648977764145	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCTTATCCCTTTTCAAA	NA	False	NA	-7	True	AATAAA	-20	NA	86195589	86143931	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_86144882_86146067_86146198_86147701_86147834_86151296_86151521_86153559_86153575_86158591_86158722_86159535_86159672_86161975_86162080_86166507_86166645_86170748_86170845_86171207_86171310_86173649_86173762_86179432_86179623_86181298_86181373_86195337
H1_mix_00055061	chr2	-	2655	7	NNC	ENSG00000239305.7	novel	3482	4	NA	NA	-97259	0	intron_retention	TRUE	canonical	0	0	junction_3	26.4931857066848	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTACAGATTTTCCAATGT	39	False	NA	NA	False	AATAAA	-18	NA	86721125	86603397	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_86605419_86612158_86612275_86620329_86620470_86688231_86688326_86694993_86695044_86701859_86701950_86720981
H1_mix_00055062	chr2	-	673	6	FSM	ENSG00000172116.23	ENST00000331469.6	832	6	70	89	41	-89	multi-exon	FALSE	canonical	1	1	junction_1	2.0976176963403	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAGAAGCTGCTTAACCC	162	False	NA	NA	False	NA	NA	NA	86861845	86815645	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_86815719_86844921_86844959_86846683_86846774_86852996_86853087_86858056_86858417_86861822
H1_mix_00055063	chr2	-	4866	2	FSM	ENSG00000214336.5	ENST00000428390.3	2841	2	-63	-1962	-63	1962	multi-exon	FALSE	canonical	3	35	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGCTTCCTGGGTATT	NA	False	NA	-17	True	AATAAA	-16	NA	88452756	88444824	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_88448830_88451895
H1_mix_00055064	chr2	-	3851	2	FSM	ENSG00000172071.15	ENST00000682656.1	3861	2	10	0	-2	0	multi-exon	FALSE	canonical	1	1	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCCCAGCTACTCAGAAG	3	True	NA	NA	False	AATACA	-32	NA	88691466	88685169	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_88688309_88690754
H1_mix_00055065	chr2	-	496	4	FSM	ENSG00000283196.2	ENST00000635968.1	827	4	0	331	0	-331	multi-exon	FALSE	canonical	1	1	junction_1	44.1537717024894	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCTTGAAGGCAGAAGG	NA	False	NA	NA	False	NA	NA	NA	89585652	89554420	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_89554601_89580557_89580636_89581005_89581141_89585549
H1_mix_00055067	chr2	-	616	4	NIC	ENSG00000143429.11	novel	761	4	NA	NA	-7	-3	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	41.3037528561268	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCATGGCTTCTGACTGAA	6	True	NA	NA	False	AATAAA	-13	NA	91659968	91636690	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_91637034_91654919_91654998_91655367_91655503_91659908
H1_mix_00055068	chr2	-	1070	1	FSM	ENSG00000232531.3	ENST00000413684.1	1047	1	-12	-11	-12	11	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGCCCTCCCCGCCCCACT	NA	False	NA	NA	False	NA	NA	NA	91748998	91747928	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_91747900_91749000
H1_mix_00055069	chr2	-	3680	2	FSM	ENSG00000144029.12	ENST00000482821.5	3680	2	0	0	0	0	multi-exon	FALSE	canonical	3	647	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTTGAGCACATGTTAT	NA	False	NA	-19	True	AATAAA	-15	NA	95093691	95087207	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_95087582_95090385
H1_mix_00055070	chr2	-	1472	1	Genic_Genomic	ENSG00000144026.12	novel	NA	NA	NA	NA	-248	-11464	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTTTTTGTTCCCT	4	True	NA	NA	False	ATTAAA	-25	NA	95165661	95164189	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr2_-_95164200_95165700
H1_mix_00055071	chr2	-	1459	3	FSM	ENSG00000232931.6	ENST00000664191.1	1464	3	0	5	0	1	multi-exon	FALSE	canonical	2	2	junction_2	1.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTGATGTTGTTGGTGG	NA	False	NA	NA	False	ATTAAA	-21	NA	95815790	95807059	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_95807303_95814049_95814146_95814670
H1_mix_00055072	chr2	-	4268	5	NNC	ENSG00000135956.9	novel	6271	4	NA	NA	-22	32976	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	91.8708332388468	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTAGCAGTGGAAAGAGAA	NA	False	NA	NA	False	AAAACA	-1	NA	96266019	96215537	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_96215574_96250574_96254116_96254832_96254998_96265137_96265513_96265868
H1_mix_00055073	chr2	-	5186	22	NNC	ENSG00000114982.19	novel	5156	21	NA	NA	0	57034	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	35.8642565510451	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAGGTGGTTAGTGTGAG	-8	True	NA	NA	False	NA	NA	NA	96638312	96536135	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_96536166_96593171_96595632_96601642_96601777_96602115_96602339_96602752_96602863_96604249_96604381_96604778_96604864_96605319_96605512_96608507_96608665_96608863_96609065_96609498_96609563_96610725_96610884_96611063_96611139_96612281_96612354_96612461_96612564_96612817_96612935_96613487_96613620_96619358_96619545_96619671_96619763_96631311_96631483_96636920_96637186_96638282
H1_mix_00055074	chr2	-	5272	22	NNC	ENSG00000114982.19	novel	5156	21	NA	NA	0	57034	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	45.500890823803	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAGGTGGTTAGTGTGAG	-8	True	NA	NA	False	NA	NA	NA	96638312	96536135	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_96536168_96593171_96595632_96601642_96601777_96602115_96602339_96602752_96602863_96604249_96604381_96604778_96604864_96605319_96605512_96608507_96608665_96608863_96609065_96609498_96609563_96610725_96610884_96611063_96611139_96612281_96612354_96612461_96612564_96612817_96612935_96613487_96613620_96619358_96619545_96619671_96619763_96631311_96631544_96636920_96637185_96638258
H1_mix_00055075	chr2	-	5284	22	NNC	ENSG00000114982.19	novel	5253	21	NA	NA	0	57034	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	38.0649879897209	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAGGTGGTTAGTGTGAG	-1	True	NA	NA	False	NA	NA	NA	96638346	96536135	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_96536169_96593171_96595632_96601642_96601777_96602115_96602339_96602752_96602863_96604249_96604381_96604778_96604864_96605319_96605512_96608507_96608665_96608863_96609065_96609498_96609563_96610725_96610884_96611063_96611139_96612281_96612354_96612461_96612564_96612817_96612935_96613487_96613620_96619358_96619545_96619671_96619763_96631311_96631544_96636920_96637186_96638282
H1_mix_00055079	chr2	-	721	3	FSM	ENSG00000230606.11	ENST00000621982.4	724	3	0	3	0	-3	multi-exon	FALSE	canonical	3	8	junction_1	1.5	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGGGCTGATGTTGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	97423529	97416167	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_97416406_97422954_97423085_97423176
H1_mix_00055080	chr2	-	3890	17	NIC	ENSG00000196912.13	novel	5898	44	NA	NA	-32254	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	26.518566609076	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTATGTCTGATGAAAAT	5480	False	NA	NA	False	ATTAAA	-17	NA	97543863	97504802	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_97506436_97507035_97507066_97507563_97507658_97507994_97508066_97509580_97509734_97511137_97512053_97513179_97513364_97515731_97515946_97523325_97523468_97532310_97532385_97536299_97536373_97536467_97536497_97538167_97538241_97538334_97538364_97541910_97541984_97542078_97542108_97543789
H1_mix_00055081	chr2	-	1489	3	ISM	ENSG00000196912.13	ENST00000419390.2	1169	15	-479	33202	-417	-33202	5prime_fragment	FALSE	canonical	3	45	junction_1	3	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTTGTATGTGAAGGT	NA	False	NA	NA	False	AATAAA	-22	NA	97590294	97584513	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_97585118_97585283_97585399_97589524
H1_mix_00055083	chr2	-	3334	14	NNC	ENSG00000075568.17	novel	6701	41	NA	NA	17	-1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	29.5396634370863	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTTGTGGTTTTTTTT	NA	False	NA	-4	True	AATAAA	-20	NA	97796337	97756333	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_97757384_97758892_97759051_97759651_97759750_97760592_97760690_97760792_97760915_97762034_97762201_97766113_97766264_97766477_97766603_97772296_97772425_97775842_97776019_97792385_97792985_97793394_97793554_97794929_97795116_97796217
H1_mix_00055085	chr2	-	255	3	FSM	ENSG00000135951.16	ENST00000483914.5	255	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTCTCTTTTTCTTA	72	False	NA	0	True	AATAAA	-16	NA	99154869	99148263	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_99148349_99154290_99154428_99154836
H1_mix_00055086	chr2	-	936	7	NIC	ENSG00000158411.11	novel	1083	7	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	130.134118850088	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTGGTGTAAACCCATT	17	True	NA	0	True	AATAAA	-28	NA	99181021	99161426	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_99161669_99169549_99169611_99170536_99170653_99171342_99171430_99171509_99171647_99173914_99174017_99180830
H1_mix_00055087	chr2	-	2623	8	NNC	ENSG00000115526.11	novel	2854	7	NA	NA	0	9269	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	77.0525926936682	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTCATTTTTACTGCTG	235	False	NA	NA	False	AAAAAG	-16	NA	100417411	100382590	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_100382617_100391859_100393783_100395508_100395615_100397907_100398143_100402563_100402656_100406575_100406708_100415040_100415112_100417373
H1_mix_00055088	chr2	-	3411	18	ISM	ENSG00000204634.13	ENST00000376840.8	3627	20	-129	3424	0	-1	5prime_fragment	FALSE	canonical	3	53	junction_9	6.97796829474678	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTGTTTCAAGGTGATG	14	True	NA	-13	True	ATTAAA	-14	NA	101151382	101011040	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_101011541_101021680_101021747_101022280_101022522_101027382_101027452_101028047_101028147_101028302_101028433_101029490_101029777_101032267_101032386_101033543_101033759_101036017_101036169_101037531_101037709_101038460_101038656_101040177_101040386_101050400_101050642_101054107_101054337_101059420_101059540_101090253_101090365_101151126
H1_mix_00055089	chr2	-	4031	6	NIC	ENSG00000135953.11	novel	1183	7	NA	NA	11	0	intron_retention	FALSE	canonical	3	30	junction_2	26.2328038913114	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGTGTTTCATTTTTT	-5	True	NA	1	True	ATTAAA	-16	NA	102736867	102715839	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_102719208_102723699_102723879_102726844_102726975_102731024_102731069_102732321_102732410_102736645
H1_mix_00055090	chr2	-	2177	2	Genic_Genomic	ENSG00000272994.1	novel	3449	1	NA	NA	35	-1	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCTTGTTGATAATGTAA	43	False	NA	-1	True	AATATA	-21	NA	105337440	105334027	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr2_-_105335069_105336304
H1_mix_00055091	chr2	-	2593	8	NNC	ENSG00000115641.19	novel	1876	8	NA	NA	0	1330	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	57.5223115541319	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGATATATGCTGAGCATA	-3	True	NA	NA	False	AATAAA	-41	NA	105399050	105359481	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_105360187_105360518_105361435_105363284_105363472_105367569_105367740_105373558_105373734_105386360_105386541_105396646_105396698_105398841
H1_mix_00055092	chr2	-	4493	5	ISM	ENSG00000153165.19	ENST00000409886.4	7215	23	42340	-23	42253	23	3prime_fragment	FALSE	canonical	0	0	junction_1	61.0184398358398	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACACACTGTCTCTTTGG	NA	False	NA	NA	False	ATTAAA	-38	NA	106426073	106403382	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_106405230_106413083_106413286_106415849_106415990_106423042_106425267_106425993
H1_mix_00055093	chr2	-	363	1	FSM	ENSG00000214199.3	ENST00000443590.1	1346	1	1279	-296	1279	296	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGTTGAAAAATTGTCAT	1344	False	NA	NA	False	AAAAAG	-16	NA	106697397	106697034	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_106697000_106697400
H1_mix_00055094	chr2	-	3091	12	FSM	ENSG00000186522.15	ENST00000356688.8	3091	12	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	168.532312913185	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTAATTTTCCTTTCT	62	False	NA	NA	False	AATAAA	-44	NA	109614143	109542981	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_109544325_109545459_109545543_109546049_109546238_109553086_109553220_109564365_109564535_109565762_109565860_109567814_109567977_109574580_109574768_109585125_109585322_109585720_109585839_109593050_109593120_109613797
H1_mix_00055095	chr2	-	325	1	FSM	ENSG00000230650.1	ENST00000421567.1	3130	1	1982	823	1982	-823	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACATGTTGGGAGTGTGAC	NA	False	NA	NA	False	AAGAAA	-17	NA	110361755	110361430	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_110361400_110361800
H1_mix_00055096	chr2	-	233	4	ISM	ENSG00000256671.7	ENST00000632758.1	1580	9	20973	454	20929	-454	3prime_fragment	FALSE	canonical	3	22	junction_3	12.9185482500507	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACTCAAGTAAGTGTACG	NA	False	NA	NA	False	ACTAAA	-3	NA	110451887	110447093	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_110447161_110449818_110449868_110451160_110451254_110451863
H1_mix_00055097	chr2	-	7596	25	NNC	ENSG00000183054.12	novel	7305	23	NA	NA	-33818	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_23	86.2695629987773	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACTGTCTCTTTGGGGTT	NA	False	NA	NA	False	ATTAAA	-34	NA	110611040	110513801	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_110515646_110523495_110523698_110526264_110526405_110533464_110535689_110536415_110536511_110540054_110540191_110543358_110543443_110543535_110543716_110544659_110544807_110545068_110545207_110545472_110545632_110546553_110546678_110546844_110547021_110547103_110547286_110549392_110549603_110551723_110551812_110557851_110558048_110562611_110562758_110563102_110563334_110567375_110567529_110567963_110568076_110569656_110569725_110576952_110577326_110610714_110610844_110610981
H1_mix_00055098	chr2	-	3462	25	NNC	ENSG00000169679.15	novel	3762	25	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	219.840373750036	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAGTTGTTATAAATATTT	-1	True	NA	-3	True	AATAAA	-24	NA	110678063	110637831	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_110638160_110639741_110639849_110641033_110641206_110641306_110641465_110641641_110641804_110642118_110642235_110649233_110649378_110650545_110650785_110653435_110653524_110655738_110655917_110657035_110657118_110657545_110657646_110658409_110658521_110658613_110658743_110659977_110660037_110661581_110661842_110666262_110666415_110667520_110667706_110667792_110667850_110669452_110669554_110670524_110670569_110672660_110672858_110674085_110674225_110674305_110674366_110677969
H1_mix_00055100	chr2	-	2175	2	FSM	ENSG00000172965.17	ENST00000673654.1	6654	2	0	4479	0	-4479	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTCTTTTCTATTGTAT	5	False	NA	NA	False	NA	NA	NA	111495044	111365560	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_111367576_111494884
H1_mix_00055101	chr2	-	5047	37	FSM	ENSG00000153107.13	ENST00000427997.5	5047	37	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	107.148747853937	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAATAAAAAGCCTCTAC	NA	False	NA	NA	False	AATAGA	-41	NA	111856847	111766270	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_111766996_111772340_111772476_111776858_111777058_111778674_111778771_111780298_111780386_111782368_111782508_111783896_111783965_111784322_111784401_111785359_111785478_111788233_111788321_111792361_111792556_111794077_111794132_111794232_111794324_111794817_111794895_111800796_111800872_111802427_111802507_111803447_111803531_111803704_111803840_111805801_111805894_111808946_111809182_111815369_111815642_111818839_111818959_111821238_111821454_111822421_111822601_111824965_111825037_111825130_111825168_111825776_111825856_111831285_111831435_111833219_111833312_111834603_111834873_111838437_111838513_111843411_111843600_111847137_111847199_111847724_111847866_111850775_111850911_111856613_111856680_111856795
H1_mix_00055102	chr2	-	6628	16	ISM	ENSG00000169629.12	ENST00000302558.8	7299	23	26762	0	-5323	0	3prime_fragment	FALSE	canonical	3	75	junction_1	55.8816209102381	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACTGTCTCTTTGGGGTT	NA	False	NA	NA	False	ATTAAA	-34	NA	112406883	112368368	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_112370213_112378052_112378255_112380823_112380964_112388023_112390248_112390974_112391070_112394617_112394754_112397921_112398006_112398098_112398279_112399222_112399370_112399631_112399770_112400035_112400195_112401116_112401241_112401407_112401584_112401666_112401849_112403965_112404176_112406296
H1_mix_00055103	chr2	-	2026	5	FSM	ENSG00000237753.2	ENST00000457336.1	2022	5	0	-4	0	4	multi-exon	FALSE	canonical	0	0	junction_3	0.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGTCTTAGAGTTACTGA	623	False	NA	-1	True	AATAAA	-19	NA	112645690	112641827	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_112641983_112642082_112642190_112643178_112643294_112643958_112644016_112644098
H1_mix_00055104	chr2	-	678	4	NNC	ENSG00000240356.6	novel	2078	3	NA	NA	0	-9943	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	26.4701089281224	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTGTAATTTTAGTGT	NA	False	NA	1	True	ATTAAA	-31	NA	113627090	113621721	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_113622020_113622112_113622162_113625608_113625730_113626880
H1_mix_00055105	chr2	-	6844	25	NNC	ENSG00000125633.11	novel	6833	24	NA	NA	-13	5871	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	23.8580509937887	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGAGGGCATATTCAAAG	-8	True	NA	NA	False	AATAAA	-23	NA	118014146	117909606	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_117909632_117915570_117920397_117931036_117931151_117935494_117935580_117936701_117936740_117939028_117939112_117941188_117941298_117944023_117944087_117945528_117945583_117946810_117946883_117948104_117948187_117949321_117949396_117952372_117952436_117958364_117958482_117973907_117973995_117974849_117974901_117975187_117975281_117977993_117978031_117985968_117986070_117995445_117995503_117996263_117996363_118000820_118000933_118006721_118006817_118008544_118008659_118013953
H1_mix_00055107	chr2	-	1163	7	FSM	ENSG00000186132.15	ENST00000409466.6	1150	7	0	-13	0	13	multi-exon	FALSE	canonical	0	0	junction_6	51.8544972870135	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTTAAATTATAATTTGT	11	True	NA	7	True	AATAAA	-30	NA	119366742	119302211	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_119302549_119311621_119311704_119317465_119317504_119321153_119321205_119339826_119339972_119340158_119340362_119366435
H1_mix_00055108	chr2	-	7819	37	NIC	ENSG00000074054.20	novel	7877	39	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_12	151.41410340479	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTGCTTGATGATGTCT	19	True	NA	-4	True	AATAAA	-16	NA	121649431	121337775	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_121340948_121347037_121347155_121348511_121348719_121363171_121363301_121365093_121365285_121367587_121367832_121377498_121377650_121387121_121387229_121387762_121387907_121397139_121397284_121398321_121398401_121401508_121401673_121404370_121404435_121407470_121407716_121410865_121410970_121425138_121425307_121427403_121427431_121430072_121430178_121447336_121447508_121448275_121448326_121448952_121449121_121450912_121450991_121451789_121451850_121457686_121457758_121458839_121458976_121459979_121460126_121461100_121461194_121462531_121462606_121469807_121469961_121503166_121503235_121515664_121515763_121525844_121525921_121527798_121527891_121528676_121528781_121530246_121530326_121605700_121606181_121649371
H1_mix_00055109	chr2	-	7826	37	NNC	ENSG00000074054.20	novel	7877	39	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	111.510282978192	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTGCTTGATGATGTCT	12	True	NA	-4	True	AATAAA	-16	NA	121649438	121337775	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_121340948_121347037_121347155_121348511_121348719_121363171_121363301_121365093_121365285_121367587_121367832_121377498_121377650_121387121_121387229_121387762_121387907_121397139_121397284_121398321_121398401_121401508_121401673_121404367_121404435_121407470_121407716_121409023_121409048_121410865_121410970_121425138_121425307_121430072_121430178_121447336_121447508_121448275_121448326_121448952_121449121_121450912_121450991_121451789_121451850_121457686_121457758_121458839_121458976_121459979_121460126_121461100_121461194_121462531_121462606_121469807_121469961_121503166_121503235_121515664_121515763_121525844_121525921_121527798_121527891_121528676_121528781_121530246_121530326_121605700_121606181_121649371
H1_mix_00055110	chr2	-	7900	36	NNC	ENSG00000074054.20	novel	8092	40	NA	NA	-60	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	113.502458842376	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTGCTTGATGATGTCT	-4	True	NA	-4	True	AATAAA	-16	NA	121649536	121337775	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_121340948_121347037_121347155_121348511_121348719_121363171_121363301_121365093_121365285_121367587_121367832_121377498_121377650_121387121_121387229_121387762_121387907_121397139_121397284_121398321_121398401_121401508_121401673_121404367_121404435_121407470_121407716_121410865_121410970_121425138_121425307_121430072_121430178_121447336_121447508_121448275_121448326_121448952_121449121_121450912_121450991_121451789_121451850_121457686_121457758_121458839_121458976_121459979_121460126_121461100_121461194_121462531_121462606_121469807_121469961_121503166_121503235_121515664_121515763_121525844_121525921_121527798_121527891_121528676_121528781_121530246_121530326_121605700_121606181_121649371
H1_mix_00055111	chr2	-	4083	31	NIC	ENSG00000074054.20	novel	7877	39	NA	NA	7	-13053	combination_of_known_junctions	FALSE	canonical	3	10	junction_6	118.939181470569	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTATTTACCCTACAGTA	19	True	NA	NA	False	AATAAA	-10	NA	121649431	121377171	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_121377650_121387121_121387229_121387762_121387907_121397139_121397284_121398321_121398401_121401508_121401673_121404370_121404435_121407470_121407716_121409023_121409048_121410865_121410970_121425138_121425307_121430072_121430178_121447336_121447508_121448275_121448326_121448952_121449121_121450912_121450991_121451789_121451850_121457686_121457758_121458839_121458976_121459979_121460126_121461100_121461194_121462531_121462606_121469807_121469961_121503166_121503235_121515664_121515763_121525844_121525921_121527798_121527891_121528676_121528781_121530246_121530326_121605700_121606181_121649371
H1_mix_00055112	chr2	-	1478	1	FSM	ENSG00000260634.1	ENST00000567613.1	1472	1	6	-12	6	12	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTTATGATTTCTTTCC	5456	False	NA	NA	False	AATAAA	-31	NA	127025717	127024239	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_127024200_127025700
H1_mix_00055116	chr2	-	1343	3	ISM	ENSG00000072163.20	ENST00000426981.5	1409	5	1597	46	-131	-1	3prime_fragment	FALSE	canonical	3	26	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACAGCAGCCTGCGTGGT	10017	False	NA	-6	True	AATGAA	-15	NA	127640534	127638426	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_127639429_127640069_127640146_127640269
H1_mix_00055117	chr2	-	9357	21	NIC	ENSG00000136709.12	novel	9490	22	NA	NA	27	5	combination_of_known_splicesites	FALSE	canonical	2	2	junction_11	82.8247547536363	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGTGTAACTCAGGTGG	27	False	NA	0	True	AATAAA	-24	NA	127811144	127701021	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_127706553_127708676_127708893_127709489_127709583_127709692_127709857_127713582_127714022_127717154_127717264_127719264_127720354_127721835_127721989_127722590_127722731_127722957_127723045_127723252_127723348_127724886_127724966_127725060_127725216_127726650_127726778_127763061_127763160_127764827_127764980_127765173_127765270_127768188_127768294_127768932_127769002_127770777_127771005_127811011
H1_mix_00055118	chr2	-	1265	8	NNC	ENSG00000136709.12	novel	3104	6	NA	NA	13	7398	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	122.239143334962	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGCTTACCAACCTCAAT	13	True	NA	NA	False	AATAAA	-21	NA	127811158	127755134	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_127755506_127763061_127763160_127764827_127764980_127765173_127765270_127768188_127768294_127768932_127769002_127770777_127771005_127811011
H1_mix_00055119	chr2	-	4554	7	NIC	ENSG00000144233.11	novel	4692	8	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	29.3465879144786	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTTTTGTTCTGCTTTTTC	258	False	NA	-15	True	AATAAA	-17	NA	127885933	127861629	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_127865206_127866899_127866997_127869453_127869545_127871248_127871360_127873827_127874273_127884202_127884313_127885809
H1_mix_00055120	chr2	-	4250	3	NNC	ENSG00000136720.7	novel	4223	2	NA	NA	0	12367	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	157.5	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAGAATTCAATGAAATTGA	-1	True	NA	NA	False	NA	NA	NA	128318868	128224348	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_128224375_128265478_128268871_128318036
H1_mix_00055121	chr2	-	266	1	FSM	ENSG00000227653.1	ENST00000427740.1	390	1	5	119	5	-119	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTAACACTTTGAGGAACA	NA	False	NA	NA	False	AAGAAA	-5	NA	128519172	128518906	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_128518900_128519200
H1_mix_00055122	chr2	-	1350	3	FSM	ENSG00000229536.3	ENST00000654914.1	1764	3	75	339	-36	-339	multi-exon	FALSE	canonical	0	0	junction_2	2	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCAAAGAAGGCACCTGGC	NA	False	NA	NA	False	NA	NA	NA	129877589	129868473	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_129869536_129872605_129872752_129877447
H1_mix_00055123	chr2	-	337	1	Intergenic	novelGene_717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCAAGGCCAAGATGGCTC	NA	False	NA	NA	False	NA	NA	NA	130026524	130026187	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_-_130026200_130026500
H1_mix_00055124	chr2	-	330	1	Genic_Genomic	ENSG00000286058.1	novel	NA	NA	NA	NA	22770	17	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATTTGTTGGAAGTGGG	NA	False	NA	NA	False	AATAAA	-29	NA	130027157	130026827	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr2_-_130026800_130027200
H1_mix_00055125	chr2	-	789	4	FSM	ENSG00000152076.19	ENST00000409128.5	789	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	25.3113940087595	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGCTCATGATAGCAGATG	NA	False	NA	NA	False	NA	NA	NA	130145033	130141016	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_130141297_130142132_130142184_130143268_130143314_130144620
H1_mix_00055126	chr2	-	668	1	FSM	ENSG00000230756.1	ENST00000437982.1	621	1	24	-71	24	71	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACCTTTTATAGGTAATGA	NA	False	NA	NA	False	AATGAA	-18	NA	130213466	130212798	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_130212800_130213500
H1_mix_00055127	chr2	-	1225	1	FSM	ENSG00000236516.1	ENST00000451959.1	1225	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGTGGCTACGGCCAGA	NA	False	NA	NA	False	NA	NA	NA	131300444	131299219	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_131299200_131300400
H1_mix_00055128	chr2	-	1067	1	FSM	ENSG00000214077.4	ENST00000444815.2	1067	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTAGTTGTGCCTCCTAG	620	False	NA	NA	False	NA	NA	NA	131424867	131423800	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_131423800_131424900
H1_mix_00055130	chr2	-	2959	18	NNC	ENSG00000076003.5	novel	3753	17	NA	NA	0	6187	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	273.4969873255	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTAGGAAGGAGTTCTCTC	19	False	135876462	NA	False	AAAAAG	-3	NA	135876443	135833438	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_135833466_135840446_135840952_135844544_135844685_135846236_135846393_135848052_135848189_135851401_135851564_135852786_135852916_135856727_135856884_135857896_135858005_135859300_135859443_135862606_135862749_135865012_135865164_135866131_135866278_135866562_135866729_135868610_135868861_135870250_135870362_135872696_135872844_135876258
H1_mix_00055131	chr2	-	2989	18	NNC	ENSG00000076003.5	novel	3753	17	NA	NA	-26	6187	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	273.4969873255	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTAGGAAGGAGTTCTCTC	-7	False	NA	NA	False	AAAAAG	-3	NA	135876469	135833438	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_135833465_135840441_135840952_135844544_135844685_135846236_135846393_135848052_135848189_135851401_135851564_135852786_135852916_135856727_135856884_135857896_135858005_135859300_135859443_135862606_135862749_135865012_135865164_135866131_135866278_135866562_135866729_135868610_135868861_135870250_135870362_135872696_135872844_135876258
H1_mix_00055132	chr2	-	827	5	FSM	ENSG00000115866.11	ENST00000489964.5	827	5	0	0	0	0	multi-exon	FALSE	canonical	3	905	junction_1	23.2701525564402	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGCCACACTTATTCTT	5719	False	NA	23	True	NA	NA	NA	135914866	135907243	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_135907408_135911138_135911211_135911381_135911494_135912485_135912567_135914468
H1_mix_00055133	chr2	-	473	1	FSM	ENSG00000230037.1	ENST00000392399.3	473	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCCAGTCTTGCATTCGC	NA	False	NA	NA	False	NA	NA	NA	136329913	136329440	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_136329400_136329900
H1_mix_00055134	chr2	-	877	1	FSM	ENSG00000234645.3	ENST00000431545.1	765	1	15	-127	15	127	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTCCCTGTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	138288778	138287901	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_138287900_138288800
H1_mix_00055135	chr2	-	210	2	Intergenic	novelGene_722	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCCCGCACAGATGGGAAG	7924	False	NA	NA	False	NA	NA	NA	140429112	140428498	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_-_140428640_140429043
H1_mix_00055136	chr2	-	2387	10	NIC	ENSG00000121964.15	novel	10585	12	NA	NA	28	31	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	28.5791083153195	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTACCTATGTGTTTCTCA	13	True	NA	26	True	NA	NA	NA	144332484	143945982	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_143947136_143951981_143952074_143952772_143952844_144007181_144007536_144141881_144142056_144145571_144145740_144208602_144208805_144211514_144211580_144235675_144235738_144332438
H1_mix_00055138	chr2	-	2647	12	NIC	ENSG00000121964.15	novel	2607	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_11	35.573460253118	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAGCATATTCATTTACA	5367	False	NA	-7	True	AATAAA	-30	NA	144235739	143946015	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_143947136_143951981_143952074_143952772_143952844_143957194_143957340_143970652_143970763_144007181_144007536_144141881_144142056_144145571_144145740_144208602_144208805_144211514_144211580_144230240_144230323_144235675
H1_mix_00055139	chr2	-	2490	11	NIC	ENSG00000121964.15	novel	10585	12	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	26	junction_3	26.8188366638078	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTAGCATATTCATTTA	-15	True	NA	-9	True	AATAAA	-28	NA	144332512	143946017	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_143947136_143951981_143952074_143952772_143952844_143970652_143970763_144007181_144007536_144141881_144142056_144145571_144145740_144208602_144208805_144211514_144211580_144235675_144235738_144332438
H1_mix_00055141	chr2	-	1619	13	FSM	ENSG00000115947.14	ENST00000540442.5	6472	13	-10	4863	0	1053	multi-exon	FALSE	canonical	3	24	junction_12	123.115460713375	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCATGTGCTTTTTTAACA	820	False	148020761	-3	True	AATAAA	-22	NA	148020747	147935259	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_147935699_147938145_147938214_147938297_147938394_147939139_147939249_147943435_147943523_147948050_147948225_147952372_147952525_147955346_147955396_147958297_147958384_147958790_147958867_147972738_147972830_147973447_147973525_148020632
H1_mix_00055142	chr2	-	2571	5	NNC	ENSG00000115963.14	novel	2684	6	NA	NA	24	1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	64.4180681175709	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATCTGTCTTTTATTATC	91	False	NA	-3	True	AATAAA	-26	NA	150487643	150468193	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_150470239_150471626_150471762_150474874_150474985_150487267_150487454_150487548
H1_mix_00055143	chr2	-	475	2	FSM	ENSG00000183091.21	ENST00000480784.1	833	2	5	353	5	-353	multi-exon	FALSE	canonical	3	7	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTACTAGAATGGTTTA	9394	False	NA	NA	False	NA	NA	NA	151532158	151530993	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_151531102_151531791
H1_mix_00055144	chr2	-	751	8	ISM	ENSG00000183091.21	ENST00000434685.6	4065	36	14209	46245	-5046	-1186	internal_fragment	FALSE	canonical	0	0	junction_5	2.24971653543195	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCGTACTACAAAAGTCAAC	7658	False	NA	NA	False	NA	NA	NA	151540747	151531826	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_151531897_151533441_151533547_151535690_151535796_151537131_151537237_151537871_151537977_151538139_151538245_151540343_151540449_151540696
H1_mix_00055146	chr2	-	7453	25	NIC	ENSG00000196504.19	novel	8048	26	NA	NA	41	-139	combination_of_known_splicesites	FALSE	canonical	1	1	junction_21	274.960448544675	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTATCTTTTACTAAATTG	586	False	NA	NA	False	AATAAA	-20	NA	152717416	152651731	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_152656399_152657888_152658021_152658947_152659010_152659092_152659190_152659269_152659357_152662602_152662699_152663034_152663173_152663654_152663772_152663875_152663968_152664137_152664253_152669136_152669271_152670230_152670382_152671272_152671382_152672458_152672624_152672977_152673043_152673597_152673707_152676404_152676780_152677450_152677476_152679055_152679110_152679351_152679473_152681225_152681337_152693037_152693069_152694541_152694623_152715994_152716127_152717229
H1_mix_00055148	chr2	-	7361	25	NIC	ENSG00000196504.19	novel	8048	26	NA	NA	7	-139	combination_of_known_splicesites	FALSE	canonical	1	1	junction_21	233.268707568237	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTATCTTTTACTAAATTG	552	False	NA	NA	False	AATAAA	-20	NA	152717450	152651731	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_152656399_152657888_152658021_152658947_152659010_152659092_152659190_152659269_152659357_152662602_152662699_152663034_152663173_152663654_152663772_152663875_152663968_152664137_152664253_152669136_152669271_152670230_152670382_152671272_152671382_152672458_152672624_152672977_152673043_152673597_152673707_152676404_152676780_152677450_152677476_152679055_152679110_152679351_152679473_152681225_152681337_152693037_152693069_152694541_152694623_152715994_152716127_152717355
H1_mix_00055149	chr2	-	7668	26	NNC	ENSG00000196504.19	novel	8048	26	NA	NA	-18	-139	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_21	326.296674822162	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTATCTTTTACTAAATTG	3	True	NA	NA	False	AATAAA	-20	NA	152717950	152651731	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_152656399_152657888_152658021_152658947_152659010_152659092_152659190_152659269_152659357_152662602_152662699_152663034_152663173_152663654_152663772_152663875_152663980_152664137_152664253_152669136_152669271_152670230_152670382_152671272_152671382_152672458_152672624_152672977_152673043_152673597_152673707_152676404_152676780_152677450_152677476_152679055_152679110_152679351_152679473_152681225_152681337_152693037_152693069_152694541_152694623_152715994_152716127_152717355_152717626_152717830
H1_mix_00055150	chr2	-	7683	26	NIC	ENSG00000196504.19	novel	8048	26	NA	NA	4	-139	combination_of_known_splicesites	FALSE	canonical	1	1	junction_21	296.148611342346	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTATCTTTTACTAAATTG	25	True	NA	NA	False	AATAAA	-20	NA	152717977	152651731	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_152656399_152657888_152658021_152658947_152659010_152659092_152659190_152659269_152659357_152662602_152662699_152663034_152663173_152663654_152663772_152663875_152663968_152664137_152664253_152669136_152669271_152670230_152670382_152671272_152671382_152672458_152672624_152672977_152673043_152673597_152673707_152676404_152676780_152677450_152677476_152679055_152679110_152679351_152679473_152681225_152681337_152693037_152693069_152694541_152694623_152715994_152716127_152717355_152717626_152717830
H1_mix_00055153	chr2	-	469	2	FSM	ENSG00000227400.2	ENST00000424322.1	586	2	117	0	117	0	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCAGTGAGCAGGCAAGT	55	False	NA	NA	False	NA	NA	NA	153593171	153421806	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_153421964_153592859
H1_mix_00055154	chr2	-	3440	8	FSM	ENSG00000153234.15	ENST00000339562.9	3472	8	32	0	24	0	multi-exon	TRUE	canonical	1	1	junction_1	1.8405855323893	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAATTTTGTCTTCTTTTT	34	True	NA	NA	False	AATAAA	-14	NA	156332689	156324436	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_156326001_156326149_156326329_156326717_156326921_156327850_156328015_156328403_156328534_156329322_156330189_156330667_156330792_156332479
H1_mix_00055155	chr2	-	811	4	Intergenic	novelGene_730	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	48	junction_2	28.6472802664872	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACATATCTTTTGAGAGCA	NA	False	NA	5	True	AATAAA	-23	NA	156725524	156718786	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_-_156719061_156719246_156719341_156723247_156723446_156725279
H1_mix_00055157	chr2	-	1152	1	FSM	ENSG00000213194.3	ENST00000434574.1	693	1	53	-512	53	512	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATAGCACACATTTGTAA	NA	False	NA	NA	False	AATAAA	-4	NA	157211486	157210334	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_157210300_157211500
H1_mix_00055158	chr2	-	1970	1	FSM	ENSG00000230562.3	ENST00000464802.1	691	1	-44	-1235	-44	1235	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGATTTTTGCATCT	NA	False	NA	NA	False	TTTAAA	-2	NA	157380458	157378488	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_157378500_157380500
H1_mix_00055159	chr2	-	3250	11	FSM	ENSG00000115170.16	ENST00000263640.7	3047	11	-161	-42	-161	42	multi-exon	FALSE	canonical	0	0	junction_10	22.4501670372405	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCATTTTCTTATGGGAG	1128	False	NA	39	True	TATAAA	-18	NA	157875272	157736401	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_157737666_157738439_157738571_157760879_157761078_157765920_157766197_157770367_157770515_157774087_157774188_157778130_157778343_157780336_157780601_157799426_157799501_157818384_157818560_157874863
H1_mix_00055160	chr2	-	1715	9	NNC	ENSG00000196151.11	novel	1811	11	NA	NA	-21	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	20.9191150625451	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCCTAAGTTTTTTAAAT	14	True	NA	0	True	AATAAA	-19	NA	159286613	159235792	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_159236191_159248371_159248513_159256195_159256376_159257757_159257865_159271637_159271796_159275545_159275639_159279760_159279946_159282671_159283094_159286582
H1_mix_00055161	chr2	-	1548	8	NIC	ENSG00000196151.11	novel	1811	11	NA	NA	-30	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	22.3332825667003	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAGTGTCCTAAGTTTTT	5	True	NA	-5	True	AATAAA	-14	NA	159286622	159235797	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_159236191_159248371_159248513_159256195_159256376_159271701_159271796_159275545_159275639_159279760_159279946_159282671_159283094_159286582
H1_mix_00055163	chr2	-	867	1	Intergenic	novelGene_733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTCCGTTTTGAATAATT	8015	False	NA	-4	True	AATAAA	-20	NA	159316181	159315314	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_-_159315300_159316200
H1_mix_00055164	chr2	-	7472	35	NIC	ENSG00000123636.19	novel	8145	37	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_34	18.0312109264477	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTAGTTTTTCTTAATG	1185	False	NA	-2	True	AATAAA	-18	NA	159615423	159318978	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_159320419_159324810_159324955_159325652_159325919_159332539_159332687_159336941_159337078_159337566_159337773_159347485_159347647_159348677_159348834_159349006_159349281_159349707_159350358_159373044_159373190_159374690_159374754_159382558_159382803_159383605_159383681_159385154_159385370_159386352_159386608_159389344_159389486_159395768_159395835_159397344_159397390_159398828_159398895_159400598_159400665_159404848_159404911_159405021_159405115_159412334_159412546_159428310_159428420_159429199_159429261_159432756_159433364_159438302_159438696_159439008_159439213_159446781_159446976_159448241_159448410_159453612_159453802_159478574_159478722_159555822_159555866_159615393
H1_mix_00055165	chr2	-	8739	41	Fusion	ENSG00000123636.19_ENSG00000226266.7	novel	8145	37	NA	NA	-1	0	multi-exon	FALSE	canonical	2	2	junction_38	20.0559218187547	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTAGTTTTTCTTAATG	6	True	NA	-2	True	AATAAA	-18	NA	159712431	159318978	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr2_-_159320419_159324810_159324955_159325652_159325919_159332539_159332687_159336941_159337078_159337566_159337773_159347485_159347647_159348677_159348834_159349006_159349281_159349707_159350358_159373044_159373190_159374690_159374754_159382558_159382803_159383605_159383681_159385154_159385370_159386352_159386608_159389344_159389486_159395768_159395835_159397344_159397390_159398828_159398895_159400598_159400665_159404848_159404911_159405021_159405115_159412334_159412546_159427940_159428043_159428310_159428420_159429199_159429261_159430862_159431157_159432756_159433364_159438302_159438696_159439008_159439213_159446781_159446976_159448241_159448410_159453612_159453802_159478574_159478722_159555822_159555866_159616241_159616602_159635184_159635327_159670707_159670811_159710716_159710895_159712313
H1_mix_00055166	chr2	-	7604	34	NIC	ENSG00000123636.19	novel	8145	37	NA	NA	124	-70	combination_of_known_junctions	FALSE	canonical	0	0	junction_33	22.0895165209327	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTTTTTAGGAGTGTT	54	False	NA	-11	True	AATAAA	-20	NA	159516535	159319048	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_159320419_159324810_159324955_159325652_159325919_159332539_159332687_159336941_159337078_159337461_159337773_159347485_159347647_159348677_159348834_159349006_159349281_159349707_159350358_159373044_159373190_159374690_159374754_159382558_159382803_159383605_159383681_159385154_159385370_159386352_159386608_159389344_159389486_159395768_159395835_159397344_159397390_159398828_159398895_159400598_159400665_159404848_159404911_159405021_159405115_159412334_159412546_159427940_159428043_159428310_159428420_159429199_159429261_159432756_159433364_159438302_159438696_159439008_159439213_159446781_159446976_159448241_159448410_159478574_159478722_159516278
H1_mix_00055168	chr2	-	368	1	FSM	ENSG00000287091.1	ENST00000664982.1	756	1	453	-65	453	65	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTTGCCCCAGATTTCA	799	False	NA	NA	False	AATAAA	-43	NA	159797590	159797222	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_159797200_159797600
H1_mix_00055169	chr2	-	3046	17	ISM	ENSG00000153246.13	ENST00000392771.1	5160	27	-107	30116	-102	-30116	5prime_fragment	FALSE	canonical	2	2	junction_1	3.65237508342175	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCATAGATTTTTGAGAAT	181	False	NA	NA	False	AGTAAA	-19	NA	160062717	159975930	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_159976226_159976684_159976721_159977283_159977417_159979829_159979915_159983927_159984074_159987155_159987359_160005651_160005822_160013262_160013376_160016613_160016713_160020105_160020264_160022664_160022860_160028217_160028362_160028849_160028964_160032958_160033133_160042024_160042199_160044773_160045158_160062294
H1_mix_00055170	chr2	-	4183	14	NNC	ENSG00000153250.21	novel	4286	14	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_13	109.937852266391	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCCTGTCAATTTTTTT	13	True	NA	-11	True	AATAAA	-18	NA	160407882	160272150	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_160274765_160275629_160275715_160277302_160277384_160278547_160278659_160281313_160281365_160284774_160284869_160284994_160285045_160286968_160287085_160300650_160300731_160303329_160303488_160313155_160313248_160318168_160318228_160367215_160367389_160407463
H1_mix_00055171	chr2	-	4181	14	NNC	ENSG00000153250.21	novel	1815	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_13	111.7204351106	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCCTGTCAATTTTTTT	6	True	NA	-11	True	AATAAA	-18	NA	160407889	160272150	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_160274765_160275629_160275715_160277302_160277384_160278547_160278659_160281313_160281365_160284774_160284869_160284994_160285045_160286977_160287085_160300650_160300731_160303329_160303488_160313155_160313248_160318168_160318228_160367215_160367389_160407463
H1_mix_00055172	chr2	-	960	1	FSM	ENSG00000226121.2	ENST00000420969.1	6821	1	5914	-53	5914	53	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATTATTAAATATCTAGTT	NA	False	NA	NA	False	NA	NA	NA	161501791	161500831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_161500800_161501800
H1_mix_00055174	chr2	-	472	1	FSM	ENSG00000226121.2	ENST00000420969.1	6821	1	531	5818	531	-5818	mono-exon	FALSE	NA	NA	NA	NA	NA	328	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGTGAAGAAAGATACACT	NA	False	NA	NA	False	AATAGA	-44	NA	161507174	161506702	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_161506700_161507200
H1_mix_00055176	chr2	-	9228	13	FSM	ENSG00000082438.18	ENST00000375458.6	9367	13	0	139	0	-139	multi-exon	FALSE	canonical	2	9	junction_7	3.75185139483014	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTACATTATTATTATGA	13	True	NA	NA	False	AATATA	-31	NA	164841418	164680326	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_164686033_164692220_164692398_164694268_164695837_164699404_164699500_164700521_164700757_164704443_164704519_164704951_164705106_164722074_164722312_164722424_164722523_164727968_164728198_164729913_164730116_164743686_164743876_164841155
H1_mix_00055177	chr2	-	336	1	FSM	ENSG00000224331.2	ENST00000417151.1	310	1	6	-32	6	32	mono-exon	FALSE	NA	NA	NA	NA	NA	203	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAACCAATAAATTCTACTT	6773	False	NA	NA	False	NA	NA	NA	164687590	164687254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_164687300_164687600
H1_mix_00055178	chr2	-	451	3	FSM	ENSG00000082438.18	ENST00000483743.6	731	3	47	233	-13	-233	multi-exon	FALSE	canonical	2	4	junction_2	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACGCTGGAGTAAATGAAA	169	False	NA	NA	False	NA	NA	NA	164842127	164743686	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_164743876_164841155_164841247_164841956
H1_mix_00055183	chr2	-	8058	10	NIC	ENSG00000123600.21	novel	9791	10	NA	NA	18	-1662	combination_of_known_junctions	FALSE	canonical	1	8	junction_8	40.2798850023491	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAAAGCTCCAGCATCGTC	17	False	NA	-3	True	AATAAA	-19	NA	171434762	171317407	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_171324363_171325840_171325907_171326041_171326149_171330558_171330699_171331803_171331868_171337452_171337503_171339183_171339555_171360421_171360514_171414602_171414727_171434673
H1_mix_00055184	chr2	-	1738	10	NIC	ENSG00000123600.21	novel	9791	10	NA	NA	26	-2	combination_of_known_junctions	FALSE	canonical	3	8	junction_4	36.72957566315	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCAGACTCTTCCCATT	25	False	NA	-4	True	AGTAAA	-45	NA	171434754	171323789	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_171324363_171325840_171325907_171326041_171326149_171330558_171330699_171331764_171331868_171337452_171337503_171339183_171339555_171360421_171360514_171392042_171392198_171434673
H1_mix_00055185	chr2	-	205	1	FSM	ENSG00000224553.1	ENST00000428525.1	348	1	221	-78	221	78	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTAAACATACACCTACTG	NA	False	NA	NA	False	AATAAA	-27	NA	171375057	171374852	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_171374900_171375100
H1_mix_00055186	chr2	-	226	1	FSM	ENSG00000236391.3	ENST00000434546.1	243	1	38	-21	38	21	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATTGTTCAGAAAACAAC	NA	False	NA	NA	False	NA	NA	NA	173338423	173338197	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_173338200_173338400
H1_mix_00055188	chr2	-	3929	7	NNC	ENSG00000172845.18	novel	11714	7	NA	NA	13	-6	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_5	143.862685301722	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGAGTTTGTTGTATT	8	True	NA	-8	True	AATAAA	-15	NA	173965360	173908537	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_173910258_173913069_173913267_173918592_173918786_173954872_173956233_173963760_173963875_173964404_173964554_173965164
H1_mix_00055190	chr2	-	4808	8	NNC	ENSG00000115935.18	novel	4587	8	NA	NA	-276	153	intron_retention	FALSE	canonical	2	3	junction_7	15.0753210951691	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCATCTTCGTTTTTTCCG	9221	False	NA	NA	False	AGTAAA	-24	NA	174585865	174559418	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_174562603_174567069_174567184_174567860_174568074_174571675_174572447_174575203_174575381_174581309_174581440_174585522_174585612_174585735
H1_mix_00055191	chr2	-	487	3	FSM	ENSG00000115935.18	ENST00000487291.1	553	3	0	66	0	-66	multi-exon	FALSE	canonical	1	1	junction_1	1.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAAGTGGAACTGTGATT	-25	True	NA	NA	False	NA	NA	NA	174682916	174676402	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_174676667_174677044_174677125_174682773
H1_mix_00055192	chr2	-	1884	2	FSM	ENSG00000128656.15	ENST00000492964.1	742	2	-51	-1091	-51	3	multi-exon	FALSE	canonical	3	346	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGATTATTCCAAAAATA	9476	False	NA	NA	False	AATAAA	-19	NA	174802108	174798805	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_174800288_174801706
H1_mix_00055193	chr2	-	1852	12	FSM	ENSG00000128656.15	ENST00000651501.1	1852	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_11	110.894932032141	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATTTTCTGTTAAATTAT	17	True	NA	-18	True	AATAAA	-33	NA	175005364	174799494	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_174800288_174801706_174801813_174808904_174809043_174811510_174811589_174812308_174812483_174824433_174824519_174846879_174846958_174915057_174915172_174918533_174918566_174944887_174944944_174952163_174952203_175005205
H1_mix_00055196	chr2	-	417	1	FSM	ENSG00000225808.1	ENST00000443295.1	316	1	-155	54	-155	-54	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATAGCAACCCAAATCAA	1428	False	NA	NA	False	NA	NA	NA	177229661	177229244	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_177229200_177229700
H1_mix_00055200	chr2	-	13968	21	ISM	ENSG00000155657.29	ENST00000342175.11	81357	191	258438	-1023	105312	0	3prime_fragment	FALSE	canonical	1	1	junction_18	20.9099856527928	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGCTGGTTGTTTTCT	8515	False	NA	-3	True	AATAAA	-23	NA	178546204	178525988	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_178527308_178527445_178527749_178528273_178528428_178528527_178529220_178529959_178530117_178530240_178535850_178535981_178536576_178536937_178537244_178537341_178537918_178538539_178538840_178538945_178539252_178539381_178539967_178540067_178540371_178541281_178541585_178542263_178542564_178542661_178542950_178543068_178543663_178543833_178544116_178544200_178544507_178545387_178545694_178545819
H1_mix_00055201	chr2	-	1556	19	ISM	ENSG00000155657.29	ENST00000589042.5	109224	363	154100	120532	-1803	-6444	internal_fragment	FALSE	canonical	1	7	junction_13	5.70791090624059	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTGAACCACAGCCTGAA	NA	False	NA	NA	False	ATTAAA	-14	NA	178653323	178646520	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_178646560_178647063_178647145_178647380_178647465_178649247_178649332_178649553_178649632_178649816_178649895_178650163_178650272_178650750_178650835_178651242_178651321_178651452_178651537_178651665_178651750_178651883_178651968_178652095_178652180_178652263_178652348_178652457_178652542_178652652_178652737_178652847_178652932_178653040_178653125_178653237
H1_mix_00055202	chr2	-	723	9	FSM	ENSG00000155657.29	ENST00000425332.2	723	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	2.53722289127305	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGTCACTGATTTTAG	9949	False	NA	NA	False	NA	NA	NA	178667307	178663626	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_178663711_178663818_178663903_178664014_178664099_178664459_178664538_178664653_178664738_178664851_178664927_178665376_178665461_178666823_178666902_178667235
H1_mix_00055203	chr2	-	835	1	FSM	ENSG00000226564.1	ENST00000434913.1	548	1	-117	-170	-117	170	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTCTCTGATGCATTCTT	33	False	NA	-2	True	AATAAA	-24	NA	180873531	180872696	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_180872700_180873500
H1_mix_00055204	chr2	-	338	2	FSM	ENSG00000287129.1	ENST00000658772.1	704	2	289	77	289	-77	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTTCCTTAAGCTCTAT	NA	False	NA	NA	False	NA	NA	NA	185952882	185950545	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_185950759_185952757
H1_mix_00055206	chr2	-	4502	1	FSM	ENSG00000259915.2	ENST00000564407.2	2204	1	-2299	1	-2299	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTTTTTCTGTTTATTT	NA	False	NA	NA	False	AATAAA	-17	NA	186359072	186354570	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_186354600_186359100
H1_mix_00055207	chr2	-	1732	9	NIC	ENSG00000003436.16	novel	3859	8	NA	NA	-49	471	combination_of_known_junctions	FALSE	canonical	3	23	junction_8	47.0179487004697	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTGAGTTTCACATATAA	NA	False	NA	NA	False	AATACA	-21	NA	187565809	187466530	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_187467043_187467752_187467933_187484123_187484217_187484810_187484988_187488336_187488376_187496880_187497079_187503647_187503771_187554199_187554350_187565549
H1_mix_00055209	chr2	-	6054	2	NNC	ENSG00000003436.16	novel	804	5	NA	NA	0	-60958	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGTGGTCTCTTCACA	0	True	NA	2	True	AATAAA	-25	NA	187565760	187557973	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_187563817_187565549
H1_mix_00055210	chr2	-	607	2	NNC	ENSG00000003436.16	novel	804	5	NA	NA	15	-60968	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAAAGCCTGTTTGGTGG	57	False	NA	-8	True	AATAAA	-15	NA	187565745	187557983	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_187558395_187565549
H1_mix_00055212	chr2	-	1076	11	NIC	ENSG00000198130.16	novel	2434	14	NA	NA	0	34	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	170.10537910366	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATACTGTGTTAATGCCTC	NA	False	NA	25	True	NA	NA	NA	190290485	190204600	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_190204803_190205099_190205233_190208879_190208914_190212955_190213076_190244886_190244969_190246153_190246213_190249639_190249727_190252161_190252308_190261155_190261235_190287585_190287639_190290404
H1_mix_00055213	chr2	-	233	1	FSM	ENSG00000251935.1	ENST00000516126.1	217	1	70	-86	70	86	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTGAAAACACTGTGTAA	NA	False	NA	NA	False	ATTAAA	-11	NA	190553410	190553177	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_190553200_190553400
H1_mix_00055214	chr2	-	4006	24	FSM	ENSG00000115415.20	ENST00000540176.6	4020	24	16	-2	13	0	multi-exon	FALSE	canonical	3	9	junction_23	51.6474891741721	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGAGGTTTAGCTGTCA	6802	False	NA	-6	True	ATTAAA	-17	NA	191014215	190969148	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_190970718_190974829_190974933_190975811_190975888_190976839_190977026_190978855_190979002_190979771_190979867_190980619_190980670_190982382_190982519_190983641_190983741_190984309_190984394_190985618_190985661_190986853_190986948_190987038_190987069_190989614_190989675_190991227_190991321_190995060_190995220_190997855_190998008_190998216_190998309_190999625_190999705_191001073_191001164_191007562_191007662_191008962_191009108_191009875_191010005_191014017
H1_mix_00055216	chr2	-	280	2	FSM	ENSG00000119041.11	ENST00000481098.1	547	2	267	0	267	0	multi-exon	FALSE	canonical	3	324	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATTGTTCTATATAAAGCA	NA	False	NA	NA	False	NA	NA	NA	196766737	196764578	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_196764686_196766564
H1_mix_00055217	chr2	-	8316	24	FSM	ENSG00000115524.17	ENST00000470268.2	8308	24	0	-8	0	0	multi-exon	FALSE	canonical	1	11	junction_2	433.163136078622	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTAGTAGACCAATTTTT	-17	True	NA	-20	True	AATAAA	-17	NA	197435044	197389783	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_197392462_197392971_197393187_197396055_197396329_197397984_197398117_197398460_197398582_197400054_197400167_197400251_197400435_197400714_197400937_197401399_197401526_197401741_197401889_197401984_197402131_197402555_197402827_197402948_197403036_197403584_197403765_197405075_197405178_197405274_197405473_197407997_197408120_197408368_197408582_197409769_197410008_197416740_197416912_197418508_197420543_197421028_197421134_197423807_197423975_197434971
H1_mix_00055219	chr2	-	936	4	FSM	ENSG00000226124.9	ENST00000416668.5	944	4	0	8	0	-2	multi-exon	FALSE	canonical	1	3	junction_3	5.90668171555645	650	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTTTCAAAAATAATTTG	-12	True	NA	NA	False	AATAAA	-14	NA	199851173	199760551	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_199760836_199846074_199846171_199848847_199848970_199850739
H1_mix_00055221	chr2	-	2542	7	FSM	ENSG00000155729.13	ENST00000409157.5	2556	7	14	0	14	0	multi-exon	FALSE	canonical	2	7	junction_6	11.1803398874989	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTATTTTCTGTGTCTGT	47	False	NA	NA	False	AATAAA	-16	NA	200510054	200488957	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_200490617_200493171_200493275_200497752_200497848_200498890_200499085_200504747_200504960_200506856_200507092_200510010
H1_mix_00055226	chr2	-	1435	8	FSM	ENSG00000115993.13	ENST00000430254.1	1436	8	0	1	0	-1	multi-exon	FALSE	canonical	3	25	junction_5	8.06605383628177	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATTTCTCTTTGTAAAAT	-20	True	NA	NA	False	AATAAA	-13	NA	201451500	201395128	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_201395445_201397501_201397581_201398144_201398355_201399376_201399494_201401017_201401095_201407402_201407598_201420416_201420707_201451349
H1_mix_00055227	chr2	-	3748	9	FSM	ENSG00000003393.16	ENST00000681692.1	4218	9	477	-7	-47	0	multi-exon	FALSE	canonical	3	126	junction_5	17.3132896931808	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTATGTGGTTGTTTTA	NA	False	NA	-7	True	AATAAA	-9	NA	201712595	201700559	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_201701890_201704121_201704219_201704453_201704604_201705138_201705201_201705415_201705462_201706845_201707023_201707868_201707992_201709880_201710039_201710990
H1_mix_00055231	chr2	-	768	1	FSM	ENSG00000273209.1	ENST00000608741.1	768	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCGGGGTTATCCTCGTT	3231	False	NA	-26	True	ATTAAA	-16	NA	202033537	202032769	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_202032800_202033500
H1_mix_00055232	chr2	-	527	3	FSM	ENSG00000287041.1	ENST00000652912.1	4834	3	113	4194	113	-4194	multi-exon	FALSE	canonical	0	0	junction_2	1	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGCAATACTCTGTCT	8222	False	NA	NA	False	NA	NA	NA	202149514	202141763	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_202141860_202148549_202148760_202149293
H1_mix_00055233	chr2	-	1185	1	FSM	ENSG00000273456.1	ENST00000607928.1	673	1	-513	1	-513	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGTTCTGTTATACTAAA	-6	True	NA	-4	True	AATAAA	-17	NA	202376117	202374932	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_202374900_202376100
H1_mix_00055234	chr2	-	613	4	FSM	ENSG00000163596.17	ENST00000425178.5	879	4	218	48	218	-48	multi-exon	FALSE	canonical	3	23	junction_3	2.44948974278318	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCCACAGAATAATTAAGAT	NA	False	NA	NA	False	NA	NA	NA	202829016	202819652	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_202819900_202821357_202821482_202825694_202825768_202828847
H1_mix_00055235	chr2	-	211	1	FSM	ENSG00000228513.1	ENST00000445936.1	1090	1	884	-5	884	5	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGGAAAACATGCAATTTT	NA	False	NA	NA	False	AATGAA	-28	NA	203061519	203061308	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_203061300_203061500
H1_mix_00055237	chr2	-	9699	14	FSM	ENSG00000173166.18	ENST00000319170.10	9699	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	5.49125178386915	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTAACTTTTAAGAGTA	6	True	NA	NA	False	AATAAA	-19	NA	203535301	203433681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_203441414_203444867_203445011_203447958_203448080_203448737_203448837_203454429_203454541_203455436_203455581_203457529_203457596_203459906_203460029_203461248_203461409_203461847_203461926_203489583_203490090_203491213_203491320_203495233_203495354_203535110
H1_mix_00055238	chr2	-	5628	2	NNC	ENSG00000114933.16	novel	14128	11	NA	NA	58922	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGTTTTTAGTTTAATT	9524	False	NA	-6	True	AATAAA	-16	NA	206004322	205993720	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_205998961_206003934
H1_mix_00055239	chr2	-	584	3	FSM	ENSG00000023228.14	ENST00000498520.1	593	3	0	9	0	-9	multi-exon	FALSE	canonical	3	351	junction_2	44.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAAGGAACTTGAAA	6952	False	NA	NA	False	NA	NA	NA	206132969	206127568	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_206127973_206130087_206130243_206132944
H1_mix_00055240	chr2	-	2022	3	FSM	ENSG00000183671.13	ENST00000439932.5	592	3	130	-1560	11	-124	multi-exon	FALSE	canonical	2	3	junction_1	0.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTTAATTTTGTACAAT	4457	False	NA	NA	False	AATATA	-42	NA	206213614	206175439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_206177276_206213306_206213426_206213547
H1_mix_00055241	chr2	-	745	3	FSM	ENSG00000183671.13	ENST00000451790.5	756	3	11	0	11	0	multi-exon	FALSE	canonical	2	2	junction_2	0.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGTTCAATAATCATACT	4457	False	NA	NA	False	NA	NA	NA	206213614	206176712	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_206177276_206213306_206213422_206213547
H1_mix_00055242	chr2	-	1460	5	ISM	ENSG00000138400.13	ENST00000454776.6	1795	12	7	16210	7	2152	5prime_fragment	FALSE	canonical	2	10	junction_4	7.43303437365925	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATAGGATTATGATATCT	10	True	NA	NA	False	AATAAA	-24	NA	206765279	206754466	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_206755506_206756897_206757041_206757236_206757372_206760900_206761014_206765249
H1_mix_00055244	chr2	-	3537	2	NNC	ENSG00000163251.4	novel	7039	2	NA	NA	-82981	15	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCCTCATGTTTTTA	NA	False	NA	-14	True	AATAAA	-18	NA	207852887	207762582	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_207766091_207852858
H1_mix_00055245	chr2	-	607	3	FSM	ENSG00000229150.2	ENST00000440809.2	621	3	15	-1	14	1	multi-exon	TRUE	canonical	3	34	junction_2	56.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTATCCTCTGTTCCTT	15	False	NA	-6	True	AATAAA	-25	NA	208112637	208108156	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_208108497_208112265_208112509_208112613
H1_mix_00055246	chr2	-	1087	8	ISM	ENSG00000188674.11	ENST00000341287.9	1195	9	2992	7	-22	1	3prime_fragment	FALSE	canonical	2	5	junction_4	4.20883424647321	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAATACAGGCTTTCTC	3221	False	NA	56	True	AATAAA	-10	NA	208187038	208165353	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_208165816_208170944_208171064_208171987_208172076_208180744_208180817_208181217_208181306_208182964_208183048_208184950_208185033_208186945
H1_mix_00055251	chr2	-	11430	10	ISM	ENSG00000115568.16	ENST00000411696.7	11290	11	99	-1	0	1	intron_retention	FALSE	canonical	2	7	junction_7	16.5260736749874	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGGCTTGTGTTTGCTC	3	True	NA	-3	True	AATAAA	-36	NA	218659524	218633327	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_218638809_218640663_218640770_218642027_218645065_218646170_218646349_218648634_218649460_218650358_218650527_218651700_218652301_218656149_218656464_218658700_218658877_218658979
H1_mix_00055253	chr2	-	784	1	FSM	ENSG00000224928.2	ENST00000432100.1	650	1	225	-359	225	359	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTATACTGTCATCATTA	NA	False	NA	NA	False	CATAAA	-15	NA	218953825	218953041	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_218953000_218953800
H1_mix_00055254	chr2	-	205	2	FSM	ENSG00000187736.13	ENST00000481764.1	555	2	0	350	0	-350	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAGTGGAAGTTAATTCA	9272	False	NA	NA	False	NA	NA	NA	219160762	219159169	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219159332_219160719
H1_mix_00055255	chr2	-	1120	4	ISM	ENSG00000163521.16	ENST00000497855.5	1599	11	1958	-158	1958	-5	3prime_fragment	FALSE	canonical	3	8	junction_1	2.16024689946929	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATACCTCTAGCCCTGT	7192	False	NA	-7	True	ATTAAA	-22	NA	219238276	219236602	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_219237348_219237511_219237728_219237825_219237958_219238249
H1_mix_00055260	chr2	-	687	3	ISM	ENSG00000124006.15	ENST00000489804.5	694	4	326	0	1	0	3prime_fragment	FALSE	canonical	2	4	junction_1	46.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTGCCTCTCTGAGT	6	True	NA	-4	True	AATAAA	-14	NA	219552388	219550728	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr2_-_219550869_219551528_219551799_219552111
H1_mix_00055261	chr2	-	457	1	FSM	ENSG00000124006.15	ENST00000596474.1	544	1	156	-69	156	69	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCCTACTGGCTACACTG	NA	False	NA	NA	False	NA	NA	NA	219554616	219554159	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_219554200_219554600
H1_mix_00055262	chr2	-	1911	2	NIC	ENSG00000124006.15	novel	5520	14	NA	NA	-651	17	intron_retention	FALSE	canonical	3	80	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCTTGTACAGCTGGGG	NA	False	NA	0	True	AATAAA	-18	NA	219557678	219555148	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr2_-_219556724_219557342
H1_mix_00055263	chr2	-	331	2	Intergenic	novelGene_766	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAATTTCTTAATTTTTT	11	False	NA	NA	False	NA	NA	NA	223724048	223720854	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_-_223720995_223723857
H1_mix_00055264	chr2	-	1947	1	FSM	ENSG00000228446.2	ENST00000440417.2	714	1	304	-1537	304	1537	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCTACTTAGCCAAACACA	NA	False	NA	NA	False	NA	NA	NA	224499796	224497849	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_224497800_224499800
H1_mix_00055265	chr2	-	373	3	FSM	ENSG00000135905.20	ENST00000492251.1	405	3	32	0	32	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGACCTAACTGCTCA	6187	False	NA	NA	False	NA	NA	NA	224795094	224792973	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_224793073_224793399_224793458_224794878
H1_mix_00055266	chr2	-	3194	9	FSM	ENSG00000236432.8	ENST00000670070.1	4250	9	0	1056	0	42	multi-exon	TRUE	canonical	2	7	junction_7	5.09288719686584	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAAAAGAAATGCT	7258	False	NA	NA	False	NA	NA	NA	227325226	227236496	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_227238175_227259177_227259284_227264668_227265439_227265874_227265936_227268627_227268770_227279482_227279579_227281703_227281790_227305459_227305656_227325167
H1_mix_00055267	chr2	-	3296	7	FSM	ENSG00000236432.8	ENST00000665988.1	4221	7	237	688	0	42	multi-exon	FALSE	canonical	2	3	junction_5	5.70818126318124	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAAAAGAAATGCT	7010	False	NA	NA	False	NA	NA	NA	227325474	227236496	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_227238175_227259177_227259284_227264668_227265439_227265838_227265936_227268627_227268770_227305459_227305656_227325167
H1_mix_00055268	chr2	-	1936	5	FSM	ENSG00000236432.8	ENST00000656540.1	1936	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	6.68954408012983	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCTAGAACTGTGAAAATA	NA	False	NA	-41	True	NA	NA	NA	227305618	227258515	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_227259284_227264668_227265439_227265838_227265936_227268627_227268770_227305459
H1_mix_00055269	chr2	-	2854	4	FSM	ENSG00000153823.19	ENST00000392054.7	2745	4	-108	-1	-86	0	multi-exon	FALSE	canonical	0	0	junction_2	5.65685424949238	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGTCTGTCCTTTTTC	9108	False	NA	1	True	AATAAA	-37	NA	229271373	229023972	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_229026109_229155817_229155965_229262682_229262894_229271013
H1_mix_00055288	chr2	-	8957	27	FSM	ENSG00000068024.18	ENST00000345617.7	8976	27	0	19	0	-15	multi-exon	FALSE	canonical	0	0	junction_26	15.9475842617928	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTTACTTGCCCTCCCAG	702	False	NA	-21	True	AATAAA	-4	NA	239400949	239048186	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_239053137_239053459_239053602_239054748_239054834_239066721_239066856_239068488_239068608_239081094_239081193_239082101_239082222_239084154_239084243_239087558_239087615_239090008_239090117_239095009_239095057_239102775_239102897_239108049_239108184_239111525_239111713_239115052_239115311_239126455_239126680_239134244_239134444_239134526_239134644_239139683_239139797_239144582_239144715_239156651_239156774_239163802_239163924_239176412_239176564_239189832_239190078_239236592_239236665_239352677_239352919_239400376
H1_mix_00055289	chr2	-	7982	25	NNC	ENSG00000068024.18	novel	8976	27	NA	NA	32	-510	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	19.684843295174	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAACAGTTTTTGTTTGTTT	663	False	NA	NA	False	ATTAAA	-27	NA	239400988	239048681	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr2_-_239053137_239053459_239053602_239054748_239054834_239066721_239066856_239068488_239068608_239081094_239081193_239082101_239082222_239084154_239084243_239087558_239087615_239090008_239090117_239095009_239095057_239102775_239102897_239108049_239108184_239111525_239111713_239115052_239115311_239126455_239126680_239134244_239134444_239134526_239134644_239139683_239139797_239156651_239156774_239163802_239163924_239176412_239176564_239189832_239190078_239352677_239352919_239400691
H1_mix_00055292	chr2	-	640	3	FSM	ENSG00000172428.11	ENST00000489698.1	640	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	880	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGGAGTGATCTCTTTC	4495	False	NA	-24	True	ATTAAA	-15	NA	240136176	240130827	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr2_-_240131089_240133932_240134006_240135870
H1_mix_00055305	chr2	+	415	1	Intergenic	novelGene_662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATATATGCCCAGATGGC	NA	False	NA	NA	False	NA	NA	NA	12631432	12631847	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_12631400_12631800
H1_mix_00055306	chr2	+	201	1	Intergenic	novelGene_666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAACTATTACAGAAACGC	NA	False	NA	NA	False	AATAGA	-32	NA	18262433	18262634	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_18262400_18262600
H1_mix_00055307	chr2	+	1021	1	Intergenic	novelGene_680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	NA	False	NA	NA	False	AGTAAA	-41	NA	58218151	58219172	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_58218200_58219200
H1_mix_00055308	chr2	+	275	1	Intergenic	novelGene_690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CGTCTCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70200436	70200711	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_70200400_70200700
H1_mix_00055309	chr2	+	874	1	Intergenic	novelGene_691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGCTAATTTTTAATTT	NA	False	NA	NA	False	NA	NA	NA	70271234	70272108	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_70271200_70272100
H1_mix_00055310	chr2	+	3322	1	Intergenic	novelGene_695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATCAGTAAATGCCCC	NA	False	NA	NA	False	NA	NA	NA	73753921	73757243	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_73753900_73757200
H1_mix_00055311	chr2	+	685	1	Intergenic	novelGene_700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAACCTATAAACTCTC	NA	False	NA	NA	False	ATTAAA	-34	NA	77967475	77968160	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_77967500_77968200
H1_mix_00055312	chr2	+	248	1	Intergenic	novelGene_704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGACGATCATACCCAATT	7150	False	NA	NA	False	NA	NA	NA	85316899	85317147	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_85316900_85317100
H1_mix_00055313	chr2	+	214	1	Intergenic	novelGene_705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTTCTTCCTGGATGTG	NA	False	NA	NA	False	NA	NA	NA	87197826	87198040	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_87197800_87198000
H1_mix_00055314	chr2	+	252	1	Intergenic	novelGene_706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGAGCCACTCTGCTCACT	NA	False	NA	NA	False	NA	NA	NA	88306594	88306846	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_88306600_88306800
H1_mix_00055315	chr2	+	281	1	Intergenic	novelGene_710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTGAAAGGGAAATTTAC	NA	False	NA	NA	False	NA	NA	NA	96435400	96435681	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_96435400_96435700
H1_mix_00055317	chr2	+	448	1	Intergenic	novelGene_719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTGACGAGGTTGGTAAA	NA	False	NA	NA	False	NA	NA	NA	131310640	131311088	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_131310600_131311100
H1_mix_00055318	chr2	+	305	1	Intergenic	novelGene_725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGAATTTGGTATGCTAT	1586	False	NA	NA	False	NA	NA	NA	148649232	148649537	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_148649200_148649500
H1_mix_00055319	chr2	+	3831	1	Intergenic	novelGene_727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAGGGGCTTGATTAACT	NA	False	NA	NA	False	NA	NA	NA	154574031	154577862	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_154574000_154577900
H1_mix_00055320	chr2	+	299	1	Intergenic	novelGene_728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCAGCCACTCCCAGAGC	NA	False	NA	NA	False	NA	NA	NA	154869409	154869708	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_154869400_154869700
H1_mix_00055321	chr2	+	570	1	Intergenic	novelGene_736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCATTGCAGGGACGCCT	NA	False	NA	NA	False	NA	NA	NA	164459431	164460001	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_164459400_164460000
H1_mix_00055322	chr2	+	917	1	Intergenic	novelGene_737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCAGCATGCTTTGAAAGGA	NA	False	NA	NA	False	ATTAAA	-42	NA	164461194	164462111	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_164461200_164462100
H1_mix_00055323	chr2	+	732	1	Intergenic	novelGene_738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAAGCCACTAGCCCGCC	NA	False	NA	NA	False	NA	NA	NA	164462424	164463156	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_164462400_164463200
H1_mix_00055325	chr2	+	395	1	Intergenic	novelGene_741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTTCTATGCACTGTGC	625	False	NA	NA	False	NA	NA	NA	174396491	174396886	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_174396500_174396900
H1_mix_00055326	chr2	+	277	1	Intergenic	novelGene_742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CGTCTCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	182451095	182451372	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_182451100_182451400
H1_mix_00055327	chr2	+	2433	1	Intergenic	novelGene_744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGTTATATTCTTAATGAA	NA	False	NA	NA	False	NA	NA	NA	187636221	187638654	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_187636200_187638700
H1_mix_00055328	chr2	+	206	1	Intergenic	novelGene_746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCATGTCCCATCTGTGC	NA	False	NA	NA	False	NA	NA	NA	192132549	192132755	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_192132500_192132800
H1_mix_00055329	chr2	+	204	1	Intergenic	novelGene_749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCTGGACAACATTTATC	NA	False	NA	NA	False	TTTAAA	-40	NA	197379363	197379567	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_197379400_197379600
H1_mix_00055330	chr2	+	1347	1	Intergenic	novelGene_753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTTTCTTTTGCTCTTGT	NA	False	NA	NA	False	TTTAAA	-37	NA	206805301	206806648	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_206805300_206806600
H1_mix_00055331	chr2	+	783	1	Intergenic	novelGene_755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCTTGGTTTCTTGACTT	5483	False	NA	NA	False	NA	NA	NA	210023245	210024028	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr2_+_210023200_210024000
H1_mix_00055333	chr20	+	2752	1	FSM	ENSG00000247315.4	ENST00000500893.4	2752	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGCACTATTTCCTTTC	-3	True	NA	37	True	AATAAA	-25	NA	297569	300321	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_297600_300300
H1_mix_00055334	chr20	+	4673	1	FSM	ENSG00000177732.9	ENST00000342665.5	4673	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTCTCATTGTCTGTTT	1	True	NA	21	True	AATAAA	-17	NA	325551	330224	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_325600_330200
H1_mix_00055335	chr20	+	2396	4	FSM	ENSG00000125841.13	ENST00000382291.7	2088	4	-315	7	-73	0	multi-exon	FALSE	canonical	3	184	junction_1	37.1872140511882	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGACTTTGTTTCCTTT	-5	True	NA	23	True	AATAAA	-13	NA	346708	354861	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_347143_349248_349364_349637_349833_353209
H1_mix_00055336	chr20	+	2180	3	FSM	ENSG00000125841.13	ENST00000492242.5	846	3	-153	-1181	-52	0	multi-exon	FALSE	canonical	3	43	junction_2	70.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGACTTTGTTTCCTTT	16	True	NA	23	True	AATAAA	-13	NA	346729	354861	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_347143_349248_349364_353209
H1_mix_00055337	chr20	+	2454	5	FSM	ENSG00000125841.13	ENST00000382285.7	2074	5	-381	1	-52	0	multi-exon	FALSE	canonical	3	17	junction_1	121.653195601266	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGACTTTGTTTCCTTT	16	True	NA	23	True	AATAAA	-13	NA	346729	354861	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_347143_347433_347513_349248_349364_349637_349833_353209
H1_mix_00055340	chr20	+	2356	4	FSM	ENSG00000101255.12	ENST00000217233.9	2356	4	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	11.6714276000077	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTTTTCTCTGCAATT	3	True	NA	NA	False	AATAAA	-18	NA	380759	397559	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_381170_388010_388302_391286_391580_396197
H1_mix_00055341	chr20	+	3694	12	FSM	ENSG00000125826.21	ENST00000356286.10	3701	12	0	7	0	-7	multi-exon	FALSE	canonical	3	35	junction_6	23.8788263343791	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAAATGTCAAAGCTTGG	-20	True	NA	9	True	ATTAAA	-21	NA	408298	432132	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_408780_409880_410026_417525_417620_417731_417931_419346_419469_419557_419732_420870_421032_422126_422239_427312_427493_428490_428590_428950_429095_430349
H1_mix_00055342	chr20	+	2632	11	FSM	ENSG00000125826.21	ENST00000415942.5	2613	11	-19	0	-16	0	multi-exon	FALSE	canonical	3	32	junction_6	24.416387939251	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATGAGTGTGATGTCCTT	616	False	NA	8	True	ATTAAA	-16	NA	408033	430966	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_408780_409880_410026_417525_417620_417731_417931_419346_419469_419557_419732_422126_422239_427312_427493_428490_428590_428950_429095_430349
H1_mix_00055343	chr20	+	1213	3	FSM	ENSG00000125826.21	ENST00000475269.5	1200	3	-13	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	12	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGACTGCTTTTTCAT	-5	True	NA	20	True	AATAAA	-19	NA	408064	410764	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_408780_409880_410026_410411
H1_mix_00055344	chr20	+	2535	11	FSM	ENSG00000125826.21	ENST00000353660.7	2511	11	-24	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	29.6042226717744	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATGAGTGTGATGTCCTT	77	False	NA	8	True	ATTAAA	-16	NA	408146	430966	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_408780_417525_417620_417731_417931_419346_419469_419557_419732_420870_421032_422126_422239_427312_427493_428490_428590_428950_429095_430349
H1_mix_00055345	chr20	+	1030	3	FSM	ENSG00000125826.21	ENST00000400245.3	1024	3	-6	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	44	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGACTGCTTTTTCAT	-20	True	NA	20	True	AATAAA	-19	NA	408298	410764	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_408780_409829_410026_410411
H1_mix_00055346	chr20	+	2222	10	FSM	ENSG00000125826.21	ENST00000382181.2	2208	10	-14	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	31.2674642557988	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATGAGTGTGATGTCCTT	-20	True	NA	8	True	ATTAAA	-16	NA	408298	430966	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_408780_417525_417620_417731_417931_419346_419469_419557_419732_422126_422239_427312_427493_428490_428590_428950_429095_430349
H1_mix_00055347	chr20	+	2321	11	NIC	ENSG00000125826.21	novel	765	6	NA	NA	-5018	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	28.4949118264998	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATGAGTGTGATGTCCTT	8436	False	NA	8	True	ATTAAA	-16	NA	416923	430966	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_417343_417525_417620_417731_417931_419346_419469_419557_419732_420870_421032_422126_422239_427312_427493_428490_428590_428950_429095_430349
H1_mix_00055348	chr20	+	2568	4	FSM	ENSG00000125826.21	ENST00000468272.1	1486	4	0	-1082	0	-91	multi-exon	FALSE	canonical	3	84	junction_1	9.03081145609604	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTTAGAAATTTAAATCG	1245	False	NA	-75	True	NA	NA	NA	422153	432048	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_422239_427312_427493_428490_429095_430349
H1_mix_00055349	chr20	+	1831	2	FSM	ENSG00000125898.13	ENST00000381941.8	1807	2	-24	0	-24	0	multi-exon	FALSE	canonical	2	6	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTGGGCCTTCAGACTCT	3837	False	NA	28	True	AATAAA	-21	NA	833690	846277	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_833952_844707
H1_mix_00055350	chr20	+	2072	2	FSM	ENSG00000125898.13	ENST00000541082.2	1614	2	-460	2	-460	0	multi-exon	FALSE	canonical	3	57	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTGGGCCTTCAGACTCT	4760	False	NA	28	True	AATAAA	-21	NA	840814	846277	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_841317_844707
H1_mix_00055351	chr20	+	2040	7	FSM	ENSG00000125818.18	ENST00000246015.8	2042	7	2	0	2	0	multi-exon	FALSE	canonical	3	52	junction_6	221.234415646993	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTTTTTTAAATAGCAGC	-32	True	NA	22	True	AATAAA	-24	NA	1118599	1167328	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_1118903_1125497_1125651_1127425_1127509_1135120_1135307_1163129_1163184_1164317_1164477_1166226
H1_mix_00055352	chr20	+	8155	7	FSM	ENSG00000125818.18	ENST00000335877.11	8154	7	-1	0	-1	0	multi-exon	FALSE	canonical	3	583	junction_3	36.3581719379106	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATTAGAGTTTTGACTCT	-31	True	NA	NA	False	ATTAAA	-23	NA	1118600	1172246	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_1118903_1125497_1125651_1127425_1127509_1135120_1135307_1163129_1163184_1164317_1164477_1165028
H1_mix_00055353	chr20	+	5018	6	FSM	ENSG00000101298.15	ENST00000381873.7	4995	6	-24	1	-2	0	multi-exon	TRUE	canonical	3	11	junction_1	2.22710574513201	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCTTGGCCTGTTTTCTT	-16	True	NA	13	True	ATTAAA	-18	NA	1266291	1309327	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_1266398_1266653_1266761_1296324_1296422_1297144_1297253_1300561_1300712_1304877
H1_mix_00055354	chr20	+	3155	3	FSM	ENSG00000234684.8_ENSG00000229728.1	ENST00000665859.2	438	3	22	-2739	1	17	multi-exon	FALSE	canonical	3	9	junction_1	3	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTTTTCCTGGGCTGA	9	True	NA	20	True	AATAAA	-30	NA	1325421	1362602	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_1325530_1350338_1350482_1359698
H1_mix_00055355	chr20	+	4046	9	FSM	ENSG00000198053.12	ENST00000400068.7	4201	9	155	0	155	0	multi-exon	FALSE	canonical	2	8	junction_1	10.6036550302242	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTCCGGTGTTCAGTAT	18	False	NA	NA	False	AATAAA	-20	NA	1894321	1939894	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_1894518_1895438_1895527_1915098_1915456_1921394_1921713_1922312_1922646_1924763_1924878_1927874_1927900_1934714_1934755_1937319
H1_mix_00055356	chr20	+	4570	9	FSM	ENSG00000198053.12	ENST00000622179.4	4570	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	13.869368226419	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTAGTGGTTACTATGTG	27	False	NA	NA	False	AATAAA	-22	NA	1894507	1940592	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_1894518_1895438_1895527_1915098_1915456_1921394_1921713_1922312_1922646_1924763_1924878_1927874_1927900_1934714_1934767_1937319
H1_mix_00055358	chr20	+	4580	8	FSM	ENSG00000198053.12	ENST00000358771.5	4580	8	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	6.9045976991969	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTAGTGGTTACTATGTG	10	True	NA	NA	False	AATAAA	-22	NA	1895406	1940592	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_1895527_1915098_1915456_1921394_1921713_1922312_1922646_1924763_1924878_1927874_1927900_1934714_1934755_1937319
H1_mix_00055359	chr20	+	6777	4	FSM	ENSG00000125834.13	ENST00000381482.8	6469	4	-308	0	-308	0	multi-exon	FALSE	canonical	3	27	junction_1	48.5615302705982	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGTTTTGTGGTTTGTTG	NA	False	NA	57	True	AATAAA	-43	NA	2101518	2148555	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_2102176_2102767_2103366_2116665_2117416_2143783
H1_mix_00055360	chr20	+	6215	3	ISM	ENSG00000125834.13	ENST00000381482.8	6469	4	846	0	-218	0	3prime_fragment	FALSE	canonical	3	129	junction_2	1	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGTTTTGTGGTTTGTTG	22	False	NA	57	True	AATAAA	-43	NA	2102672	2148555	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_+_2103366_2116665_2117416_2143783
H1_mix_00055361	chr20	+	588	2	FSM	ENSG00000226644.5	ENST00000411839.1	536	2	-52	0	-42	0	multi-exon	FALSE	canonical	3	14	junction_1	0	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGATGGTGTTGACTA	NA	False	NA	5	True	ATTAAA	-14	NA	2207174	2213151	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_2207520_2212908
H1_mix_00055362	chr20	+	919	7	FSM	ENSG00000101361.17	ENST00000494697.5	919	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	237.363762094292	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGTGCAGAGCCTGGCAA	-1	True	NA	NA	False	NA	NA	NA	2652631	2655512	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_2652664_2652841_2652932_2653278_2653394_2654175_2654309_2654413_2654576_2654748_2654948_2655324
H1_mix_00055363	chr20	+	1913	12	FSM	ENSG00000101361.17	ENST00000329276.10	1913	12	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_1	184.132587874486	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTCATGTTCTTTATT	-1	True	NA	14	True	AATAAA	-16	NA	2652631	2658393	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_2652664_2652841_2652932_2653278_2653394_2654413_2654576_2654748_2654948_2655324_2655513_2655594_2655747_2655933_2656035_2656400_2656550_2656773_2656896_2657080_2657219_2657928
H1_mix_00055364	chr20	+	2082	12	NIC	ENSG00000101361.17	novel	1913	12	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	355	junction_1	189.942226971195	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGTTCATGTTCTTTAT	9	False	NA	13	True	AATAAA	-15	NA	2652641	2658392	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_2652664_2652841_2652932_2653278_2653394_2654413_2654576_2654748_2654948_2655324_2655513_2655594_2655747_2655933_2656215_2656400_2656550_2656773_2656896_2657080_2657219_2657928
H1_mix_00055365	chr20	+	2458	12	ISM	ENSG00000101361.17	ENST00000651302.1	1768	14	49	-353	-4	0	intron_retention	FALSE	canonical	3	147	junction_11	199.715748415815	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGTTCATGTTCTTTAT	9	False	NA	13	True	AATAAA	-15	NA	2652641	2658392	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_+_2652664_2652841_2652932_2653278_2653394_2654413_2654576_2654748_2654948_2655324_2655513_2655594_2655747_2655933_2656035_2656400_2656550_2656773_2656896_2657080_2657219_2657372
H1_mix_00055366	chr20	+	929	5	FSM	ENSG00000101361.17	ENST00000480992.5	929	5	0	0	0	0	multi-exon	FALSE	canonical	3	393	junction_4	88.697167373034	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGGGTGGGGGGGCGTTG	574	False	NA	NA	False	NA	NA	NA	2654788	2656549	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_2654948_2655324_2655513_2655594_2655747_2655933_2656215_2656400
H1_mix_00055367	chr20	+	998	4	FSM	ENSG00000101361.17	ENST00000484998.5	998	4	0	0	0	0	multi-exon	FALSE	canonical	3	393	junction_3	101.945519219281	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGGGTGGGGGGGCGTTG	882	False	NA	NA	False	NA	NA	NA	2655096	2656549	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_2655513_2655594_2655747_2655933_2656215_2656400
H1_mix_00055368	chr20	+	2662	2	FSM	ENSG00000101361.17	ENST00000616692.1	2662	2	0	0	0	0	multi-exon	FALSE	canonical	3	884	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTCATGTTCTTTATT	1332	False	NA	14	True	AATAAA	-16	NA	2655546	2658393	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_2656896_2657080
H1_mix_00055369	chr20	+	1143	5	FSM	ENSG00000101361.17	ENST00000492135.5	1143	5	0	0	0	0	multi-exon	FALSE	canonical	3	393	junction_1	219.193265179385	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTCATGTTCTTTATT	1731	False	NA	14	True	AATAAA	-16	NA	2655945	2658393	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_2656215_2656400_2656550_2656773_2656896_2657080_2657219_2657928
H1_mix_00055370	chr20	+	1108	6	FSM	ENSG00000101361.17	ENST00000466447.5	1094	6	-14	0	-14	0	multi-exon	FALSE	canonical	3	31	junction_5	357.072205583128	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTCATGTTCTTTATT	-4	True	NA	14	True	AATAAA	-16	NA	2656096	2658393	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_2656215_2656400_2656550_2656773_2656896_2657080_2657219_2657372_2657489_2657928
H1_mix_00055372	chr20	+	875	3	FSM	ENSG00000101361.17	ENST00000462630.5	859	3	-16	0	-16	0	multi-exon	FALSE	canonical	3	884	junction_1	24	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTCATGTTCTTTATT	-1	True	NA	14	True	AATAAA	-16	NA	2656623	2658393	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_2656896_2657080_2657219_2657928
H1_mix_00055373	chr20	+	745	2	FSM	ENSG00000101361.17	ENST00000467857.1	735	2	-10	0	-10	0	multi-exon	FALSE	canonical	3	932	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTCATGTTCTTTATT	-2	True	NA	14	True	AATAAA	-16	NA	2656938	2658393	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_2657219_2657928
H1_mix_00055374	chr20	+	2708	24	FSM	ENSG00000215305.10	ENST00000380445.8	2708	24	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_19	16.0749661543035	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTTGTCTTACACAGT	2	True	NA	22	True	AATAAA	-15	NA	2840744	2866732	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_2840828_2859718_2859808_2860053_2860152_2860238_2860368_2860448_2860594_2860747_2860864_2860969_2861093_2861224_2861281_2861614_2861705_2861804_2861900_2862053_2862131_2862578_2862711_2862806_2862935_2863064_2863101_2863289_2863399_2863948_2864084_2864178_2864288_2864364_2864463_2864546_2864655_2864977_2865056_2865147_2865318_2865398_2865496_2866211_2866316_2866429
H1_mix_00055377	chr20	+	3737	23	FSM	ENSG00000132670.21	ENST00000216877.10	3725	23	-12	0	-4	0	multi-exon	FALSE	canonical	3	374	junction_11	58.9125279580941	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTTGAATTGTTCCCAT	-52	True	NA	NA	False	GATAAA	-19	NA	2873476	3039076	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_2873761_2923206_2923286_2947981_2948025_2964271_2964351_2964860_2965203_2986764_2986850_2988031_2988106_2988337_2988475_3005055_3005147_3007343_3007421_3015848_3015886_3017815_3017914_3021308_3021429_3022053_3022221_3022688_3022825_3024471_3024622_3026686_3026781_3027120_3027198_3027706_3027842_3035584_3035711_3035789_3035942_3037153_3037290_3038058
H1_mix_00055378	chr20	+	3279	22	NIC	ENSG00000132670.21	novel	3725	23	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	3	140	junction_2	93.4186684718189	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAAATGTCTCTCCCTTT	-46	True	NA	14	True	AATAAA	-15	NA	2873482	3038667	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_2873761_2923206_2923286_2964271_2964351_2964860_2965203_2986764_2986850_2988031_2988106_2988337_2988475_3005055_3005147_3007343_3007421_3015848_3015886_3017815_3017914_3021308_3021429_3022053_3022221_3022688_3022825_3024471_3024622_3026686_3026781_3027120_3027198_3027706_3027842_3035584_3035711_3035789_3035942_3037153_3037290_3038058
H1_mix_00055380	chr20	+	1016	4	FSM	ENSG00000125901.6	ENST00000380325.4	1016	4	0	0	0	0	multi-exon	FALSE	canonical	3	1310	junction_3	86.7653284568336	312	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACACCCACTCATTGACT	-8	True	NA	31	True	AATAAA	-17	NA	3046051	3048250	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_3046281_3046372_3046520_3046613_3046738_3047734
H1_mix_00055381	chr20	+	1028	7	FSM	ENSG00000125877.13	ENST00000483354.5	1028	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	393.093182337216	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGTGTCTGTCTCAGTC	192	False	NA	31	True	AATAAA	-31	NA	3208867	3223870	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_3209034_3213168_3213227_3213984_3214059_3215280_3215313_3218516_3218633_3221840_3221918_3223365
H1_mix_00055382	chr20	+	1046	8	FSM	ENSG00000125877.13	ENST00000380113.8	1037	8	-9	0	0	0	multi-exon	FALSE	canonical	3	651	junction_2	91.8079183815373	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCCCAGGCAGGTGTC	-12	True	NA	21	True	AATAAA	-21	NA	3209488	3223860	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_3209618_3213168_3213227_3213318_3213384_3213984_3214059_3215280_3215313_3218516_3218633_3221840_3221918_3223365
H1_mix_00055383	chr20	+	897	6	FSM	ENSG00000125877.13	ENST00000399838.3	897	6	0	0	0	0	multi-exon	TRUE	canonical	3	78	junction_1	308.191239330387	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGTGTCTGTCTCAGTC	24	True	NA	31	True	AATAAA	-31	NA	3209524	3223870	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_3209618_3213984_3214059_3215280_3215313_3218516_3218633_3221840_3221918_3223365
H1_mix_00055384	chr20	+	5678	1	FSM	ENSG00000277287.1	ENST00000621919.1	5678	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTCCAGTTCCTGTTGT	3	True	NA	NA	False	NA	NA	NA	3239704	3245382	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_3239700_3245400
H1_mix_00055385	chr20	+	8668	29	FSM	ENSG00000088812.18	ENST00000262919.10	8651	29	-17	0	-17	0	multi-exon	FALSE	canonical	3	28	junction_28	20.4414295198826	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTTTTGTTCTGAGTG	6	False	NA	17	True	AATAAA	-18	NA	3471000	3651118	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_3471518_3535252_3535337_3540221_3540336_3545761_3545891_3547283_3547490_3549169_3549339_3559392_3559484_3560661_3560906_3562275_3562460_3563208_3563364_3565347_3565433_3572730_3572952_3575826_3575949_3576858_3576998_3578581_3578773_3582134_3582355_3583897_3584084_3584646_3584881_3591168_3591307_3594478_3594573_3596376_3596430_3597905_3598001_3600945_3601025_3604104_3604263_3624510_3624573_3634310_3634390_3638827_3638936_3644153_3644269_3646722
H1_mix_00055386	chr20	+	4033	25	FSM	ENSG00000088812.18	ENST00000446916.2	3921	25	0	-112	0	112	multi-exon	FALSE	canonical	3	51	junction_4	13.1811629060396	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTGTTATTCCTTTG	17	False	NA	NA	False	ATTAAA	-13	NA	3471107	3616059	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_3471518_3535252_3535337_3540221_3540336_3545761_3545891_3547283_3547490_3549169_3549339_3559392_3559484_3560661_3560906_3562275_3562460_3563208_3563364_3565347_3565433_3572730_3572952_3575826_3575949_3576858_3576998_3578581_3578773_3582134_3582355_3583897_3584084_3584646_3584881_3591168_3591307_3594478_3594573_3596376_3596430_3597905_3598001_3600945_3601025_3604104_3604263_3615827
H1_mix_00055387	chr20	+	3140	13	FSM	ENSG00000132622.11	ENST00000254963.7	3133	13	-7	0	-7	0	multi-exon	FALSE	canonical	3	21	junction_4	5.53524063513854	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGCCTGCTGATATGG	-20	True	NA	13	True	AATAAA	-21	NA	3732677	3753111	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_3732795_3738657_3738718_3740814_3740913_3742283_3742409_3744901_3745089_3745492_3745598_3745914_3746032_3748216_3748392_3749231_3749319_3749749_3749855_3749968_3750228_3750803_3750908_3751510
H1_mix_00055388	chr20	+	3138	16	FSM	ENSG00000101224.18	ENST00000245960.10	3119	16	-19	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	16.6925132918923	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCATTGTGTCCTGTGGG	-13	True	NA	30	True	AATAAA	-21	NA	3796290	3806115	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_3796732_3797621_3797750_3798411_3798464_3800287_3800330_3800461_3800499_3800742_3800866_3800970_3801094_3801253_3801389_3801721_3801803_3801923_3802101_3802280_3802377_3802909_3802973_3803107_3803207_3803403_3803538_3804568_3804681_3804820
H1_mix_00055389	chr20	+	3109	16	FSM	ENSG00000101224.18	ENST00000439880.6	3096	16	-13	0	-13	0	multi-exon	FALSE	canonical	1	3	junction_1	26.3678255118283	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCATTGTGTCCTGTGGG	-1	True	NA	30	True	AATAAA	-21	NA	3796277	3806115	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_3796732_3797663_3797750_3798411_3798464_3800287_3800330_3800461_3800499_3800742_3800866_3800970_3801094_3801253_3801389_3801721_3801803_3801923_3802101_3802280_3802377_3802909_3802973_3803107_3803207_3803403_3803538_3804568_3804681_3804820
H1_mix_00055390	chr20	+	1978	15	FSM	ENSG00000101224.18	ENST00000340833.4	1978	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	30.3776401388943	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTTGTGTCCTCCAGGA	0	True	NA	5	True	NA	NA	NA	3796430	3805218	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_3796732_3797621_3797750_3798411_3798464_3800287_3800330_3800461_3800499_3800970_3801094_3801253_3801389_3801721_3801803_3801923_3802101_3802280_3802377_3802909_3802973_3803107_3803207_3803403_3803538_3804568_3804681_3804820
H1_mix_00055391	chr20	+	2760	14	NNC	ENSG00000101224.18	novel	807	9	NA	NA	-1368	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	24.5467793956402	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCATTGTGTCCTGTGGG	3226	False	NA	30	True	AATAAA	-21	NA	3799702	3806115	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_3799946_3800287_3800330_3800461_3800499_3800742_3800866_3800970_3801094_3801253_3801389_3801721_3801803_3801923_3802101_3802280_3802377_3802909_3802973_3803107_3803207_3803403_3803538_3804568_3804681_3804820
H1_mix_00055392	chr20	+	5382	3	FSM	ENSG00000125843.11	ENST00000615891.2	5372	3	-10	0	1	0	multi-exon	FALSE	canonical	3	15	junction_2	2	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTACAGGTTTTTGTG	-2	True	NA	NA	False	AATACA	-14	NA	3820536	3828838	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_3820759_3822101_3822294_3823870
H1_mix_00055393	chr20	+	1791	3	FSM	ENSG00000125843.11	ENST00000379567.6	1791	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	6	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTTTCTGTGAGTTTGA	-3	True	NA	30	True	ATTAAA	-22	NA	3820535	3825302	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_3820703_3822101_3822294_3823870
H1_mix_00055394	chr20	+	11724	7	FSM	ENSG00000088888.18	ENST00000428216.4	11731	7	7	0	7	0	multi-exon	FALSE	canonical	3	61	junction_3	9.92331709773613	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACAGTTATAATGGTCTAC	-9	True	NA	11	True	AATAAA	-23	NA	3846840	3876118	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_3846904_3854557_3854742_3857634_3857810_3861331_3861505_3862253_3862414_3864255_3864789_3865682
H1_mix_00055395	chr20	+	11555	6	FSM	ENSG00000088888.18	ENST00000416600.6	11596	6	41	0	6	0	multi-exon	FALSE	canonical	3	12	junction_2	28.6956442687736	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATAATGGTCTACAATGG	-10	True	NA	16	True	AATAAA	-28	NA	3846839	3876123	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_3846904_3854557_3854742_3861331_3861505_3862253_3862414_3864255_3864789_3865682
H1_mix_00055396	chr20	+	12113	8	NNC	ENSG00000088888.18	novel	11731	7	NA	NA	17	1497	at_least_one_novel_splicesite	FALSE	non_canonical	1	9	junction_7	26.4343622999323	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAGACCATCCTGGCTAA	1	True	NA	NA	False	NA	NA	NA	3846850	3877620	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_3846904_3854557_3854742_3857634_3857810_3861331_3861505_3862253_3862414_3864255_3864789_3865682_3868349_3869451
H1_mix_00055397	chr20	+	1608	2	ISM	ENSG00000125779.24	ENST00000336066.8	1843	7	-550	15212	0	-2173	5prime_fragment	FALSE	canonical	3	356	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACATAATTTCTCTTGTC	56	False	NA	31	True	ATTAAA	-38	NA	3888838	3908643	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_+_3889729_3907925
H1_mix_00055398	chr20	+	8484	7	FSM	ENSG00000125779.24	ENST00000316562.9	8484	7	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	80.4439073033019	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGAGTGTGATTGCAAAAA	-2	True	NA	15	True	AATAAA	-22	NA	3888922	3929887	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_3889729_3907925_3908279_3910576_3910831_3912457_3912635_3916926_3917051_3918670_3918797_3923243
H1_mix_00055399	chr20	+	1580	7	NIC	ENSG00000125779.24	novel	8484	7	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	145.636247777353	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCAGTTCCACGTTACTTT	10	False	NA	-36	True	NA	NA	NA	3888934	3923850	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_3889017_3907925_3908136_3910576_3910831_3912457_3912635_3916926_3917051_3918670_3918797_3923243
H1_mix_00055400	chr20	+	1845	7	FSM	ENSG00000125779.24	ENST00000336066.8	1843	7	-2	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	123.402345556674	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCACGTTACTTTACACT	-15	True	NA	-31	True	NA	NA	NA	3889386	3923855	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_3889729_3907925_3908136_3910576_3910831_3912457_3912635_3916926_3917051_3918670_3918797_3923243
H1_mix_00055402	chr20	+	700	1	FSM	ENSG00000226608.3	ENST00000427242.1	528	1	0	-172	0	172	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAAGAGGTGATATTACA	200	False	NA	NA	False	NA	NA	NA	4023916	4024616	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_4023900_4024600
H1_mix_00055403	chr20	+	2132	9	FSM	ENSG00000088826.18	ENST00000278795.7	2164	9	12	20	12	0	multi-exon	FALSE	canonical	2	3	junction_7	50.5542715801543	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTCTCTGGTTTTCTCA	NA	False	NA	24	True	AATAAA	-25	NA	4148790	4187727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_4148978_4175029_4175264_4177350_4177578_4181802_4181977_4182088_4182324_4182482_4182849_4183493_4183655_4186742_4186833_4187269
H1_mix_00055404	chr20	+	2059	8	FSM	ENSG00000088826.18	ENST00000339123.10	2074	8	12	3	12	-2	multi-exon	FALSE	canonical	3	23	junction_5	34.8208241705788	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCTCTGTGTATGTGTG	NA	False	NA	41	True	AATAAA	-42	NA	4148790	4187744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_4148978_4175029_4175264_4177350_4177578_4181802_4181977_4182088_4182324_4182482_4182849_4183493_4183655_4187269
H1_mix_00055405	chr20	+	2164	7	FSM	ENSG00000088826.18	ENST00000305958.9	2164	7	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	16.8226038412607	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTCTCTGGTTTTCTCA	1	True	NA	24	True	AATAAA	-25	NA	4148827	4187727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_4148978_4175029_4175264_4177350_4177578_4181802_4181977_4182088_4182849_4183493_4183655_4187269
H1_mix_00055406	chr20	+	3069	2	FSM	ENSG00000171867.18	ENST00000430350.2	2539	2	-532	2	-532	0	multi-exon	FALSE	canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCCGTGTCTGCAGTTGT	NA	False	NA	9	True	ATTAAA	-20	NA	4685817	4701588	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_4686509_4699210
H1_mix_00055407	chr20	+	2435	2	FSM	ENSG00000171867.18	ENST00000379440.9	2435	2	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCCGTGTCTGCAGTTGT	-1	True	NA	9	True	ATTAAA	-20	NA	4686455	4701588	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_4686513_4699210
H1_mix_00055408	chr20	+	3297	2	FSM	ENSG00000171867.18	ENST00000457586.2	2574	2	-725	2	-532	0	multi-exon	FALSE	canonical	3	38	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCCGTGTCTGCAGTTGT	NA	False	NA	9	True	ATTAAA	-20	NA	4685817	4701588	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_4686737_4699210
H1_mix_00055409	chr20	+	397	1	FSM	ENSG00000278595.1	ENST00000617466.1	397	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCATTCTGAGCAGCGTGA	NA	False	NA	NA	False	AATAAA	-22	NA	4761299	4761696	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_4761300_4761700
H1_mix_00055410	chr20	+	9076	13	FSM	ENSG00000101290.14	ENST00000460006.6	9076	13	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_10	18.6703865341169	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCATGTGTGGTTTTCGAT	-17	True	NA	5	True	AATAAA	-17	NA	5127007	5197887	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_5127150_5173522_5173660_5175182_5175280_5176647_5176746_5178816_5178957_5182386_5182446_5183060_5183144_5184857_5184946_5185757_5185827_5186686_5186840_5189066_5189187_5189734_5189839_5190101
H1_mix_00055411	chr20	+	592	3	FSM	ENSG00000171984.15	ENST00000378979.8	585	3	-8	1	-8	-1	multi-exon	FALSE	canonical	3	32	junction_2	16	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTGTATGAAGTATGCT	-11	True	NA	5	True	AATAAA	-17	NA	5750384	5773446	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_5750480_5772861_5773044_5773131
H1_mix_00055412	chr20	+	1606	3	FSM	ENSG00000171984.15	ENST00000303142.11	1633	3	-16	43	-8	-43	multi-exon	FALSE	canonical	3	37	junction_2	13.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCAAGTTGTGTTTGAA	-11	True	NA	NA	False	NA	NA	NA	5750384	5864352	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_5750480_5772861_5773044_5863023
H1_mix_00055413	chr20	+	2548	5	FSM	ENSG00000089199.10	ENST00000378961.9	2462	5	-78	-8	-78	8	multi-exon	FALSE	canonical	3	15	junction_1	4.58257569495584	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCATTGTTCTCAGCTTC	25	False	NA	10	True	AATAAA	-21	NA	5911431	5925361	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_5911683_5916325_5916373_5916825_5916920_5922334_5924101_5924971
H1_mix_00055414	chr20	+	3770	19	FSM	ENSG00000125885.13	ENST00000378896.7	3769	19	-1	0	-1	0	multi-exon	FALSE	canonical	3	7	junction_1	10.7731949019342	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATTTAATAATAGGTCTC	-13	True	NA	NA	False	CATAAA	-45	NA	5950650	5995206	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_5951078_5952010_5952164_5952423_5952529_5954607_5954691_5955101_5955252_5957125_5957230_5958527_5958727_5963273_5963360_5967435_5967588_5967829_5968026_5972006_5972038_5973055_5973197_5977875_5978018_5982969_5983166_5984780_5985001_5985921_5986132_5987281_5987359_5993505_5993696_5994298
H1_mix_00055415	chr20	+	7487	19	FSM	ENSG00000125885.13	ENST00000610722.4	7486	19	-1	0	-1	0	multi-exon	FALSE	canonical	3	5	junction_1	10.9645894689324	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGTTAAAACAAAAACTGAGC	-13	True	NA	NA	False	ATTAAA	-15	NA	5950650	5998977	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_5951024_5952010_5952164_5952423_5952529_5954607_5954691_5955101_5955252_5957125_5957230_5958527_5958727_5963273_5963360_5967435_5967588_5967829_5968026_5972006_5972038_5973055_5973197_5977875_5978018_5982969_5983166_5984780_5985001_5985921_5986132_5987281_5987359_5993505_5993696_5994298
H1_mix_00055416	chr20	+	3925	7	FSM	ENSG00000088766.12	ENST00000378863.9	3925	7	0	0	0	0	multi-exon	FALSE	canonical	3	578	junction_1	80.0112839264285	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAGAAATATGGCTCTAAT	2	True	NA	NA	False	AATAAA	-22	NA	6006122	6040053	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_6006553_6009774_6009913_6015360_6015491_6031284_6031371_6032011_6032081_6034463_6034556_6037073
H1_mix_00055419	chr20	+	3545	3	FSM	ENSG00000125845.7	ENST00000378827.5	3545	3	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_2	5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCATTCTATAAAGTCCAA	-6	True	NA	13	True	AATAAA	-17	NA	6767685	6780246	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_6768876_6770119_6770473_6778244
H1_mix_00055420	chr20	+	2897	2	NIC	ENSG00000125845.7	novel	3545	3	NA	NA	12	-283	combination_of_known_splicesites	FALSE	canonical	3	25	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTGGTCATATATATTT	6	True	NA	23	True	AATAAA	-24	NA	6767697	6779963	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_6768876_6778244
H1_mix_00055421	chr20	+	468	2	Intergenic	novelGene_776	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	779	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGGAAGAGTAATTCATC	2	True	NA	24	True	AATAAA	-17	NA	6818201	6820858	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_6818279_6820467
H1_mix_00055422	chr20	+	381	2	FSM	ENSG00000232271.1	ENST00000425900.1	381	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	208	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGTGACAGGGA	NA	False	NA	NA	False	NA	NA	NA	7069613	7146656	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_7069695_7146356
H1_mix_00055423	chr20	+	2397	22	ISM	ENSG00000182621.18	ENST00000625874.2	3206	28	9	48102	9	7146	5prime_fragment	FALSE	canonical	2	9	junction_16	7.41696284664287	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGACTATGTGCCAGACA	34	False	NA	NA	False	NA	NA	NA	8114461	8740419	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_+_8114574_8150293_8150372_8371381_8371451_8628293_8628432_8646101_8646182_8647899_8647954_8649373_8649450_8657183_8657285_8658537_8658705_8684931_8685079_8697625_8697784_8708669_8708753_8716263_8716349_8717670_8717849_8722353_8722422_8724655_8724753_8727308_8727394_8729049_8729175_8733237_8733393_8737027_8737193_8739260_8739361_8740343
H1_mix_00055424	chr20	+	3118	8	FSM	ENSG00000182621.18	ENST00000629992.2	3095	8	-23	0	-19	0	multi-exon	FALSE	canonical	2	6	junction_1	10.9600387307524	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGAATTTCTGAATTTAC	NA	False	NA	NA	False	AATAAA	-14	NA	8132246	8653531	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_8132751_8150293_8150372_8371381_8371451_8628293_8628432_8646101_8646182_8647899_8647954_8649373_8649450_8651412
H1_mix_00055426	chr20	+	4409	11	ISM	ENSG00000182621.18	ENST00000612075.4	6576	30	113174	-4	4434	0	3prime_fragment	FALSE	canonical	1	3	junction_10	6.46838465151849	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCGGTTATTTCTTGGG	-1	True	NA	5	True	AATAAA	-16	NA	8741461	8884900	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_+_8741574_8757045_8757179_8760406_8760461_8765138_8765359_8774538_8774720_8788448_8788526_8788632_8788723_8789517_8789576_8790174_8790262_8802055_8802174_8881621
H1_mix_00055427	chr20	+	6745	40	NIC	ENSG00000101333.19	novel	5253	39	NA	NA	319	-3	combination_of_known_junctions	TRUE	canonical	3	15	junction_1	10.4704587409478	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTTTTGTTTTTTTTTTT	252	False	NA	NA	False	ATTAAA	-16	NA	9068143	9481239	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_9068904_9096286_9096343_9217389_9217453_9307799_9307899_9337125_9337207_9338007_9338068_9338893_9339038_9362895_9362976_9365460_9365515_9371213_9371296_9372302_9372404_9373046_9373105_9380053_9380163_9384200_9384412_9387462_9387557_9389878_9389959_9390530_9390616_9393587_9393679_9395522_9395619_9401489_9401591_9405312_9405349_9407916_9408059_9408632_9408718_9409056_9409182_9411036_9411089_9419806_9419910_9421296_9421462_9423747_9423953_9435559_9435649_9437001_9437153_9443980_9444031_9444177_9444244_9453346_9453463_9457413_9457490_9459634_9459811_9468570_9468673_9472789_9472848_9473278_9473366_9476716_9476754_9478920
H1_mix_00055428	chr20	+	5603	38	FSM	ENSG00000101333.19	ENST00000693752.1	5191	38	-74	-338	-42	0	multi-exon	FALSE	canonical	3	11	junction_19	9.74158436978304	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCAAAGATTCTGAGTGG	64	False	NA	10	True	AATAAA	-25	NA	9068762	9480808	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_9068904_9217389_9217453_9307799_9307899_9337125_9337207_9338007_9338068_9338893_9339038_9362895_9362976_9365460_9365515_9371213_9371296_9372302_9372404_9373046_9373105_9380053_9380163_9384200_9384412_9387462_9387557_9389878_9389959_9390530_9390616_9393587_9393679_9395522_9395619_9401489_9401591_9407916_9408059_9408632_9408718_9409056_9409182_9411036_9411089_9419806_9419910_9421296_9421462_9423747_9423953_9435559_9435649_9437001_9437153_9443980_9444031_9444177_9444244_9453346_9453463_9457413_9457490_9459634_9459811_9468570_9468673_9472789_9472848_9473278_9473366_9476716_9476754_9478920
H1_mix_00055429	chr20	+	1233	7	ISM	ENSG00000101333.19	ENST00000688325.1	4264	37	-687	134956	319	9	5prime_fragment	FALSE	canonical	3	15	junction_1	10.9493784704379	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGTGGCTGAAAATCCAGA	252	False	NA	NA	False	NA	NA	NA	9068143	9339007	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_+_9068904_9096286_9096343_9217389_9217453_9307799_9307899_9337125_9337207_9338007_9338068_9338893
H1_mix_00055430	chr20	+	505	6	FSM	ENSG00000101333.19	ENST00000441846.5	505	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	3.97994974842648	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTACATGGTGGCTGA	108	False	NA	NA	False	NA	NA	NA	9068806	9338998	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_9068904_9217389_9217453_9307799_9307899_9337125_9337207_9338007_9338068_9338893
H1_mix_00055432	chr20	+	5303	10	FSM	ENSG00000132623.16	ENST00000378380.4	5303	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_5	13.3869293171814	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTGTTAATTGATTATGC	-26	True	NA	14	True	AATACA	-20	NA	10035048	10058303	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_10035334_10038257_10038648_10043121_10043322_10044393_10044544_10045573_10045698_10049389_10050213_10051662_10051890_10053111_10053276_10054461_10054600_10055501
H1_mix_00055433	chr20	+	1590	2	ISM	ENSG00000132623.16	ENST00000488991.1	2805	11	-19	16216	-19	-3605	5prime_fragment	FALSE	canonical	3	72	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGATGTACTTTGAAATG	23	True	NA	NA	False	AATAAA	-19	NA	10035097	10039611	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_+_10035334_10038257
H1_mix_00055434	chr20	+	2044	8	FSM	ENSG00000132639.14	ENST00000304886.6	2050	8	6	0	6	0	multi-exon	FALSE	canonical	0	0	junction_4	1.45686271816937	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATCTGCTTTAATTTCT	-6	True	NA	NA	False	ATTAAA	-15	NA	10218838	10307418	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_10218978_10275428_10275564_10277684_10277727_10284723_10284773_10292881_10293000_10296924_10297051_10299267_10299413_10306128
H1_mix_00055435	chr20	+	6060	8	FSM	ENSG00000149346.15	ENST00000334534.10	6056	8	-4	0	-4	0	multi-exon	FALSE	canonical	2	5	junction_6	6.1145527311522	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTGTATCACTTCTGT	-23	True	NA	5	True	AGTAAA	-15	NA	10435300	10628030	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_10435454_10458175_10458232_10556230_10556321_10560699_10560821_10598674_10598753_10601730_10601820_10621313_10621415_10622658
H1_mix_00055436	chr20	+	795	7	NNC	ENSG00000149346.15	novel	6056	8	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	6.15539510420646	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTGTATCACTTCTGT	8	True	NA	5	True	AGTAAA	-15	NA	10435331	10628030	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_10435454_10458175_10458232_10556230_10556321_10560699_10560821_10598674_10598753_10601730_10601820_10627791
H1_mix_00055438	chr20	+	4683	5	FSM	ENSG00000132640.15	ENST00000254977.7	4686	5	3	0	3	0	multi-exon	FALSE	canonical	3	272	junction_1	25.9855729203726	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTTTGTCACACCCTTG	NA	False	NA	33	True	AATAAA	-28	NA	11890725	11926609	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_11890955_11918333_11918602_11919085_11919177_11919717_11919837_11922633
H1_mix_00055439	chr20	+	5191	5	FSM	ENSG00000132640.15	ENST00000405977.5	5137	5	-73	19	32	0	multi-exon	FALSE	canonical	3	31	junction_1	122.964171611084	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGATTTGTTTTCCTTTAG	NA	False	NA	14	True	AATAAA	-9	NA	11890754	11926590	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_11890955_11917777_11918602_11919085_11919177_11919717_11919837_11922633
H1_mix_00055440	chr20	+	4898	6	FSM	ENSG00000132640.15	ENST00000399006.6	4826	6	-91	19	3	0	multi-exon	FALSE	canonical	3	31	junction_1	138.452013347586	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGATTTGTTTTCCTTTAG	NA	False	NA	14	True	AATAAA	-9	NA	11890725	11926590	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_11890955_11917777_11918012_11918333_11918602_11919085_11919177_11919717_11919837_11922633
H1_mix_00055443	chr20	+	4560	2	FSM	ENSG00000132640.15	ENST00000473416.1	552	2	-302	-3706	-38	0	multi-exon	FALSE	canonical	3	341	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTCCTTTAGTGCTT	769	False	NA	19	True	AATAAA	-14	NA	11919238	11926595	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_11919837_11922633
H1_mix_00055444	chr20	+	236	1	FSM	ENSG00000235698.1	ENST00000414718.1	1200	1	620	344	620	-344	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGAGAAGAAGGCTCCGA	NA	False	NA	NA	False	NA	NA	NA	12380675	12380911	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_12380700_12380900
H1_mix_00055445	chr20	+	8564	1	Intergenic	novelGene_784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	184	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTGTGTGTATTTATAC	146	False	NA	16	True	ATTAAA	-24	NA	12754169	12762733	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_12754200_12762700
H1_mix_00055446	chr20	+	3317	4	Intergenic	novelGene_785	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	28	junction_1	169.010847778084	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTTGTGTTTTGATTTC	157	False	NA	15	True	AATAAA	-23	NA	12754180	12765641	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_12754423_12756266_12756426_12760245_12760364_12762843
H1_mix_00055447	chr20	+	4740	2	Intergenic	novelGene_783	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	389	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGAGTTTGTGTGTATTT	146	False	NA	12	True	ATTAAA	-20	NA	12754169	12762729	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_12756426_12760245
H1_mix_00055448	chr20	+	2893	3	Intergenic	novelGene_788	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	201	junction_1	94	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTGTGTATTTATACCA	158	False	NA	18	True	ATTAAA	-26	NA	12754181	12762735	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_12754423_12756263_12756426_12760245
H1_mix_00055449	chr20	+	2888	3	Intergenic	novelGene_787	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	28	junction_1	180.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTGTGTGTATTTATAC	158	False	NA	16	True	ATTAAA	-24	NA	12754181	12762733	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_12754423_12756266_12756426_12760245
H1_mix_00055450	chr20	+	3313	4	Intergenic	novelGene_789	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	33	junction_3	145.412822298754	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTACCTTCTTGTGTTTT	158	False	NA	9	True	AATAAA	-17	NA	12754181	12765635	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_12754423_12756263_12756426_12760245_12760364_12762843
H1_mix_00055451	chr20	+	3067	3	Intergenic	novelGene_791	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	33	junction_2	21	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACATTCTCCTATATATA	222	False	NA	-11	True	NA	NA	NA	12754245	12765615	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_12754423_12760245_12760364_12762843
H1_mix_00055452	chr20	+	2943	6	FSM	ENSG00000101230.6	ENST00000262487.5	3090	6	12	135	12	-135	multi-exon	FALSE	canonical	1	2	junction_3	1.01980390271856	208	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCATCAAGCAATTGTTAAT	2	True	NA	NA	False	NA	NA	NA	13221285	13300516	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_13221915_13270503_13270744_13279633_13279899_13288539_13288684_13292373_13292464_13298941
H1_mix_00055453	chr20	+	4748	1	Intergenic	novelGene_794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	387	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACAGCCATGTTGCTCA	NA	False	NA	-18	True	NA	NA	NA	13357879	13362627	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_13357900_13362600
H1_mix_00055454	chr20	+	5470	11	FSM	ENSG00000101247.18	ENST00000378106.10	5449	11	-21	0	0	0	multi-exon	FALSE	canonical	3	105	junction_8	24.9697817371318	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACTGTGTTTTAGAGTAA	NA	False	NA	NA	False	GATAAA	-15	NA	13785006	13821580	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_13785291_13787311_13787353_13788588_13788653_13793179_13793228_13794837_13794942_13798460_13798501_13801485_13801684_13808841_13808903_13816462_13816547_13816874_13816958_13817117
H1_mix_00055455	chr20	+	991	10	FSM	ENSG00000101247.18	ENST00000463598.1	991	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	56.4153468306691	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTCCAGAATTTTCATC	-9	True	NA	10	True	AATAAA	-18	NA	13785049	13817228	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_13785291_13787311_13787353_13788588_13788653_13793159_13793228_13798460_13798501_13801485_13801684_13808841_13808903_13816462_13816547_13816874_13816958_13817117
H1_mix_00055456	chr20	+	933	10	FSM	ENSG00000101247.18	ENST00000475968.5	933	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	48.041905575841	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTCCAGAATTTTCATC	29	True	NA	10	True	AATAAA	-18	NA	13785087	13817228	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_13785291_13787311_13787353_13788588_13788653_13793179_13793228_13798460_13798501_13801485_13801684_13808841_13808903_13816462_13816547_13816874_13816958_13817117
H1_mix_00055458	chr20	+	326	4	FSM	ENSG00000101247.18	ENST00000469177.5	326	4	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_2	18.5172592164415	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGAAATACCTACTGTC	2093	False	NA	NA	False	NA	NA	NA	13787151	13794850	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_13787353_13788588_13788653_13793179_13793228_13794837
H1_mix_00055461	chr20	+	1117	4	FSM	ENSG00000172264.18	ENST00000483997.5	1105	4	-12	0	-5	0	multi-exon	FALSE	canonical	3	7	junction_2	6.68331255192114	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAAGTATGGTGATTTCT	-14	True	NA	NA	False	AATAAA	-15	NA	13995489	14053679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_13995810_14002287_14002405_14051921_14052021_14053098
H1_mix_00055462	chr20	+	581	4	FSM	ENSG00000172264.18	ENST00000477147.5	1149	4	-11	579	-11	-579	multi-exon	FALSE	canonical	0	0	junction_3	10.2089285540757	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTCCTGAACATCACTT	-20	True	NA	NA	False	TTTAAA	-34	NA	13995483	14493508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_13995810_14002287_14002405_14085620_14085729_14493478
H1_mix_00055464	chr20	+	299	1	FSM	ENSG00000275728.1	ENST00000616301.1	365	1	-247	313	-247	-313	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCCTATGACTGTGTAAA	4704	False	NA	NA	False	ATTAAA	-17	NA	16580010	16580309	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_16580000_16580300
H1_mix_00055465	chr20	+	1588	7	FSM	ENSG00000125870.11	ENST00000377943.9	1588	7	0	0	0	0	multi-exon	FALSE	canonical	3	890	junction_1	396.736968560055	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTACTTCTTTGTAAT	NA	False	NA	20	True	AATAAA	-17	NA	16729960	16741776	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_16730065_16731667_16731767_16732163_16732337_16737260_16737402_16738851_16738903_16740324_16740414_16740845
H1_mix_00055466	chr20	+	2301	7	FSM	ENSG00000125870.11	ENST00000246071.8	2411	7	0	110	0	-110	multi-exon	FALSE	canonical	3	818	junction_1	421.929167304445	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCAGGATTTGCTTATA	4	True	NA	NA	False	NA	NA	NA	16730025	16742454	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_16730165_16731667_16731767_16732163_16732337_16737260_16737402_16738851_16738903_16740324_16740414_16740845
H1_mix_00055467	chr20	+	3918	12	FSM	ENSG00000125851.10	ENST00000262545.7	4691	12	13	760	-3	-760	multi-exon	FALSE	canonical	2	7	junction_11	2.64418901313618	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCGAAAATTCATTTCACA	15	True	NA	NA	False	AATAAA	-8	NA	17227052	17483818	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_17227483_17260239_17260345_17358326_17358441_17360531_17360641_17369239_17369278_17409262_17409340_17429434_17429524_17436707_17436884_17453741_17453958_17456347_17456449_17465325_17465554_17481583
H1_mix_00055468	chr20	+	2488	5	FSM	ENSG00000125868.16	ENST00000474024.5	1853	5	-635	0	-628	0	multi-exon	FALSE	canonical	3	53	junction_1	1175.03986634497	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTCGTGTAATTTTCATG	16	False	NA	29	True	AATAAA	-19	NA	17569446	17608242	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_17570212_17591931_17592064_17600737_17601046_17604554_17604632_17607036
H1_mix_00055469	chr20	+	3405	4	FSM	ENSG00000125868.16	ENST00000246069.12	3405	4	0	0	0	0	multi-exon	FALSE	canonical	3	2549	junction_3	189.506376321924	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGCTTGACTGTGAAGT	-17	True	NA	3	True	AATAAA	-20	NA	17570074	17609919	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_17570212_17600737_17601046_17604554_17604632_17607036
H1_mix_00055470	chr20	+	2231	5	FSM	ENSG00000125871.14	ENST00000377710.10	2231	5	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_2	13.9821314541096	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGTTTTGTTTACTTT	0	True	NA	13	True	AATAAA	-22	NA	17969017	17991122	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_17969142_17969800_17970371_17975683_17975904_17988165_17988299_17989938
H1_mix_00055471	chr20	+	1936	5	FSM	ENSG00000125871.14	ENST00000377709.1	1936	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	103.939886472903	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGTTTTGTTTACTTT	15	True	NA	13	True	AATAAA	-22	NA	17969072	17991122	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_17969142_17969800_17970131_17975683_17975904_17988165_17988299_17989938
H1_mix_00055472	chr20	+	1781	3	FSM	ENSG00000125871.14	ENST00000377704.4	1781	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	114	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGTTTTGTTTACTTT	14	True	NA	13	True	AATAAA	-22	NA	17969114	17991122	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_17969142_17969800_17970371_17989938
H1_mix_00055473	chr20	+	2835	4	NIC	ENSG00000125871.14	novel	2231	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	214	junction_1	15.6418242755334	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGTTTTGTTTACTTT	15	True	NA	13	True	AATAAA	-22	NA	17969072	17991122	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_17970371_17975683_17975904_17988165_17988299_17989938
H1_mix_00055476	chr20	+	1268	2	FSM	ENSG00000232838.4	ENST00000432901.4	1151	2	-117	0	-117	0	multi-exon	FALSE	canonical	3	572	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGTGTTACTTAAAGAAT	NA	False	NA	12	True	AATAAA	-18	NA	18137745	18143169	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_18138052_18142207
H1_mix_00055477	chr20	+	4021	11	FSM	ENSG00000149474.15	ENST00000377681.8	3927	11	-96	2	-95	-2	multi-exon	FALSE	canonical	3	140	junction_5	103.96080992374	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCAGAGCGTCAATCTAG	NA	False	NA	21	True	AATAAA	-22	NA	18137745	18188372	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_18138052_18142207_18142920_18145232_18145352_18150820_18150943_18159083_18159266_18161819_18162240_18162376_18162946_18181709_18181847_18183122_18183299_18184601_18184793_18187285
H1_mix_00055479	chr20	+	4311	11	FSM	ENSG00000149474.15	ENST00000677266.1	4311	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	85.4260498911193	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTTCTTTGCACAACCC	39	False	NA	0	True	AATAAA	-1	NA	18137937	18188351	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_18138555_18142207_18142920_18145232_18145352_18150820_18150943_18159083_18159266_18161819_18162240_18162376_18162946_18181709_18181847_18183122_18183299_18184601_18184793_18187285
H1_mix_00055480	chr20	+	4067	11	FSM	ENSG00000149474.15	ENST00000676935.1	4067	11	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	77.9104614284885	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGTCAGTTTGCTTTCAA	16	True	NA	36	True	AATAAA	-37	NA	18138107	18188387	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_18138445_18142207_18142920_18145232_18145352_18150820_18150943_18159083_18159266_18161819_18162240_18162376_18162946_18181709_18181847_18183122_18183299_18184601_18184793_18187285
H1_mix_00055481	chr20	+	4309	11	FSM	ENSG00000149474.15	ENST00000677610.1	4064	11	-245	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	85.0790808601033	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGTCAGTTTGCTTTCAA	1	True	NA	36	True	AATAAA	-37	NA	18137862	18188387	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_18138445_18142207_18142920_18145232_18145352_18150820_18150943_18159083_18159266_18161822_18162240_18162376_18162946_18181709_18181847_18183122_18183299_18184601_18184793_18187285
H1_mix_00055482	chr20	+	2238	4	NIC	ENSG00000125846.16	novel	2717	6	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	15.5777619273972	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGCCTGTGTCCCTCA	-25	True	NA	15	True	AATAAA	-23	NA	18288512	18316994	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_18288605_18305680_18305808_18306297_18306394_18315071
H1_mix_00055483	chr20	+	2487	6	FSM	ENSG00000125846.16	ENST00000396026.7	2717	6	230	0	2	0	multi-exon	FALSE	canonical	0	0	junction_2	15.7556339129849	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGCCTGTGTCCCTCA	-25	True	NA	15	True	AATAAA	-23	NA	18288512	18316994	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_18288605_18297984_18298063_18305007_18305179_18305680_18305808_18306297_18306394_18315071
H1_mix_00055484	chr20	+	2240	4	FSM	ENSG00000125846.16	ENST00000316358.8	2242	4	0	2	0	0	multi-exon	FALSE	canonical	2	4	junction_1	17.6320415405843	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGCCTGTGTCCCTCA	2071	False	NA	15	True	AATAAA	-23	NA	18297984	18316994	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_18298063_18305667_18305808_18306297_18306394_18315068
H1_mix_00055485	chr20	+	616	2	FSM	ENSG00000132664.12	ENST00000461589.1	605	2	-11	0	-11	0	multi-exon	FALSE	canonical	3	124	junction_1	0	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTATGAATCTTGTGCCCT	NA	False	NA	NA	False	NA	NA	NA	18467377	18469368	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_18467569_18468943
H1_mix_00055486	chr20	+	2168	9	FSM	ENSG00000132664.12	ENST00000377603.5	2156	9	-12	0	-11	0	multi-exon	FALSE	canonical	3	97	junction_5	15.2868407462104	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTCTATGGTATTCTGTT	NA	False	NA	NA	False	AATAAA	-21	NA	18467377	18484646	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_18467569_18468943_18469062_18472841_18472910_18473390_18473459_18475074_18475188_18480037_18480182_18480401_18480510_18481618_18481811_18483480
H1_mix_00055487	chr20	+	2058	9	FSM	ENSG00000132664.12	ENST00000462997.5	2257	9	199	0	140	0	multi-exon	FALSE	canonical	2	9	junction_1	41.5990910357426	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCAGTCTATGGTATTCT	174	False	NA	NA	False	AATAAA	-18	NA	18467587	18484643	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_18467672_18468943_18469062_18472841_18472910_18473390_18473459_18475074_18475188_18480037_18480182_18480401_18480510_18481618_18481811_18483480
H1_mix_00055488	chr20	+	456	1	FSM	ENSG00000214612.3	ENST00000415286.1	434	1	-22	0	-22	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAACAAACCATGCTGGGT	10	False	NA	NA	False	NA	NA	NA	18504610	18505066	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_18504600_18505100
H1_mix_00055489	chr20	+	3464	20	FSM	ENSG00000101310.17	ENST00000336714.8	3464	20	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_1	110.440442831158	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTATTTTTATTTTTA	2919	False	NA	NA	False	AATATA	-19	NA	18507519	18561415	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_18507991_18510821_18511057_18512224_18512283_18515649_18515737_18524432_18524670_18524934_18525021_18525787_18525933_18526372_18526532_18527495_18527612_18530679_18530804_18532663_18532745_18535652_18535743_18542295_18542403_18543018_18543173_18545955_18546034_18548608_18548771_18551088_18551176_18554234_18554391_18555107_18555174_18560650
H1_mix_00055490	chr20	+	3026	20	FSM	ENSG00000101310.17	ENST00000650089.1	3026	20	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_1	107.989303871691	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTATTTTTATTTTTA	23	True	NA	NA	False	AATATA	-19	NA	18507939	18561415	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_18507973_18510821_18511057_18512224_18512283_18515649_18515737_18524432_18524670_18524934_18525021_18525787_18525933_18526372_18526532_18527495_18527612_18530679_18530804_18532663_18532745_18535652_18535743_18542295_18542403_18543018_18543173_18545955_18546034_18548608_18548771_18551088_18551176_18554234_18554391_18555107_18555174_18560650
H1_mix_00055491	chr20	+	834	7	FSM	ENSG00000101310.17	ENST00000422877.1	834	7	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_4	255.747705539833	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAACAAATAATCAAGGAC	NA	False	NA	NA	False	NA	NA	NA	18542367	18560833	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_18542403_18543018_18543173_18545955_18546034_18548608_18548771_18554234_18554391_18555107_18555174_18560650
H1_mix_00055492	chr20	+	502	2	FSM	ENSG00000232388.5	ENST00000411646.2	490	2	-12	0	-12	0	multi-exon	FALSE	canonical	3	427	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATCTGCGTTTTCTTTTTT	-20	True	NA	18	True	AATAAA	-18	NA	18567419	18569560	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_18567597_18569235
H1_mix_00055493	chr20	+	559	2	FSM	ENSG00000232388.5	ENST00000435844.3	575	2	16	0	16	0	multi-exon	FALSE	canonical	3	1198	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGTTTTCTTTTTTTTT	NA	False	NA	21	True	AATAAA	-21	NA	18567362	18569563	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_18567597_18569238
H1_mix_00055494	chr20	+	4283	6	FSM	ENSG00000125821.13	ENST00000377452.4	3953	6	-162	-168	-50	168	multi-exon	FALSE	canonical	3	592	junction_4	35.3417600014487	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCTGTCTTCTGCAGA	NA	False	NA	NA	False	AAAAAG	-44	NA	18587891	18766812	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_18588116_18593730_18593822_18596005_18596242_18628126_18628234_18744099_18744272_18763359
H1_mix_00055495	chr20	+	1955	1	FSM	ENSG00000273148.1	ENST00000609087.1	1539	1	-422	6	-422	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATATGTCTTTGGGCCTT	30	False	NA	NA	False	AATAAA	-19	NA	18794106	18796061	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_18794100_18796100
H1_mix_00055496	chr20	+	5835	17	FSM	ENSG00000185052.13	ENST00000328041.11	3922	17	-51	-1862	-51	1862	multi-exon	FALSE	canonical	2	13	junction_3	4.62162038683404	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACCTAATTGTTCTTAA	69	False	NA	NA	False	AATAAA	-24	NA	19212590	19724788	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_19212985_19280958_19281088_19515487_19515565_19579999_19580075_19584970_19585056_19585440_19585545_19654061_19654137_19665863_19665890_19673600_19673655_19681857_19681992_19684175_19684337_19685099_19685362_19693258_19693426_19696796_19696912_19698567_19698681_19717527_19717594_19720990
H1_mix_00055497	chr20	+	4052	9	FSM	ENSG00000132669.14	ENST00000484638.1	4053	9	0	1	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.31503239718152	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTGTTTTTTTTTTT	7	True	NA	8	True	NA	NA	NA	19935124	20002456	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_19935200_19956614_19956808_19960699_19960812_19970837_19970930_19974653_19975788_19990005_19990312_19992167_19992300_19996678_19996843_20000612
H1_mix_00055498	chr20	+	1011	5	FSM	ENSG00000173418.12	ENST00000480550.1	1000	5	-11	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	312.241493078675	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCTGAAGTTTGTTAG	9	True	NA	32	True	TATAAA	-35	NA	20017347	20033629	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_20017450_20025668_20025768_20026783_20026920_20032507_20032654_20033101
H1_mix_00055499	chr20	+	1054	6	FSM	ENSG00000173418.12	ENST00000334982.9	1040	6	-14	0	0	0	multi-exon	FALSE	canonical	3	591	junction_4	76.8728820846467	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAACTAAATCAGATTGT	9	True	NA	58	True	AATACA	-43	NA	20017347	20033655	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_20017450_20022455_20022481_20025676_20025768_20026783_20026920_20032507_20032654_20033101
H1_mix_00055500	chr20	+	679	5	FSM	ENSG00000089101.19	ENST00000431753.1	750	5	0	71	0	-71	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTGTTTCACTCTATT	NA	False	NA	NA	False	NA	NA	NA	20169378	20228376	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_20169461_20187929_20188057_20196569_20196777_20199767_20199903_20228248
H1_mix_00055501	chr20	+	1967	1	FSM	ENSG00000280229.1	ENST00000623641.1	1967	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTCAGTATCTCAGTAGC	821	False	NA	NA	False	AATAAA	-22	NA	20363690	20365657	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_20363700_20365700
H1_mix_00055502	chr20	+	2847	1	FSM	ENSG00000173404.5	ENST00000310227.3	2846	1	-2	1	-2	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGTGGCCTGATTTCT	-3	True	NA	3	True	AATAAA	-17	NA	20368101	20370948	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_20368100_20370900
H1_mix_00055504	chr20	+	2032	12	FSM	ENSG00000088970.16	ENST00000620891.4	2014	12	-18	0	6	0	multi-exon	FALSE	canonical	2	6	junction_2	64.0851706006085	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGTTAATATGTGATG	0	True	NA	NA	False	AATAAA	-20	NA	21125988	21246622	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_21126205_21132096_21132160_21145564_21145655_21161870_21162508_21162849_21163160_21205490_21205585_21214534_21214701_21215582_21215649_21229010_21229116_21232733_21232831_21244244_21244289_21246478
H1_mix_00055505	chr20	+	2102	13	FSM	ENSG00000088970.16	ENST00000619189.5	2102	13	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_7	36.263981977837	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGTTAATATGTGATG	-3	True	NA	NA	False	AATAAA	-20	NA	21126081	21246622	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_21126205_21132096_21132160_21136389_21136553_21145564_21145655_21161870_21162508_21162849_21163160_21205490_21205585_21214534_21214701_21215582_21215649_21229010_21229116_21232733_21232831_21244244_21244289_21246478
H1_mix_00055506	chr20	+	2130	13	NIC	ENSG00000088970.16	novel	2102	13	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_7	44.3552577366978	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCCTGTGTTAATATGT	7	True	NA	NA	False	AATAAA	-16	NA	21125995	21246618	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_21126205_21132096_21132160_21136389_21136553_21145564_21145655_21161870_21162508_21162849_21163160_21205490_21205531_21214534_21214701_21215582_21215649_21229010_21229116_21232733_21232831_21244244_21244289_21246478
H1_mix_00055508	chr20	+	793	8	NNC	ENSG00000088970.16	novel	1971	11	NA	NA	-27998	-3	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	67.20635295529	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAAAATCCTGTGTTAATA	-16	True	NA	NA	False	AATAAA	-13	NA	21190460	21246615	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_21190545_21205490_21205585_21214534_21214701_21215582_21215649_21229010_21229116_21232733_21232831_21244244_21244289_21246478
H1_mix_00055509	chr20	+	3426	30	FSM	ENSG00000088930.8	ENST00000377191.5	3408	30	-18	0	-18	0	multi-exon	TRUE	canonical	3	856	junction_5	86.7217590679426	164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTTGTTATTTTG	-24	True	NA	25	True	AATAAA	-19	NA	21303312	21389825	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_21303474_21326278_21326407_21326489_21326602_21328558_21328671_21330480_21330540_21330615_21330706_21331560_21331634_21331767_21331819_21332282_21332441_21333543_21333619_21333703_21333838_21333936_21333995_21334077_21334186_21339043_21339089_21340720_21340853_21344089_21344209_21346414_21346551_21348145_21348254_21348340_21348431_21349388_21349462_21354788_21354873_21356079_21356178_21356585_21356666_21357735_21357793_21365420_21365490_21365572_21365705_21368462_21368591_21381993_21382058_21386867_21387007_21389272
H1_mix_00055510	chr20	+	386	1	FSM	ENSG00000227063.5	ENST00000484902.1	81	1	-45	-260	-45	260	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATAAATCACCTCTTCTG	-7	True	NA	NA	False	NA	NA	NA	21755224	21755610	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_21755200_21755600
H1_mix_00055511	chr20	+	439	2	FSM	ENSG00000238034.2	ENST00000438222.1	569	2	2	128	2	-128	multi-exon	FALSE	canonical	1	2	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTAAGGACATTTGGGC	9811	False	NA	NA	False	AATAAA	-15	NA	21947648	21970655	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_21947703_21970270
H1_mix_00055512	chr20	+	1062	2	FSM	ENSG00000132661.4	ENST00000254998.3	1062	2	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_1	0	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTCTGATGTGTTTGA	-9	True	NA	15	True	AATACA	-14	NA	23350790	23354771	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_23351062_23353980
H1_mix_00055513	chr20	+	4901	6	FSM	ENSG00000125812.16	ENST00000338121.10	4834	6	0	-67	0	67	multi-exon	FALSE	canonical	3	49	junction_5	8.84081444212014	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGATGTGACTGAGAAAG	-2	True	NA	NA	False	NA	NA	NA	23362181	23373129	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_23362238_23364362_23365748_23367002_23367098_23368761_23368930_23369583_23369742_23370090
H1_mix_00055514	chr20	+	2120	5	NNC	ENSG00000125812.16	novel	4740	5	NA	NA	-393	492	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_4	25.2438111227287	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATTTTCAGTCATTTCT	465	False	NA	9	True	AATAAA	-10	NA	23364825	23370913	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_23365748_23367002_23367098_23368761_23368930_23369583_23369742_23370136
H1_mix_00055516	chr20	+	2694	4	NNC	ENSG00000101463.6	novel	2092	4	NA	NA	-430	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	21.0449254902195	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGTCGTTGGGTTTCAT	2	True	NA	45	True	NA	NA	NA	24469198	24666616	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_24469926_24543019_24543578_24584855_24584994_24665345
H1_mix_00055517	chr20	+	2092	4	FSM	ENSG00000101463.6	ENST00000376862.4	2092	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	17.2819751957543	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGTCGTTGGGTTTCAT	-38	True	NA	45	True	NA	NA	NA	24469628	24666616	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_24469754_24543019_24543578_24584855_24584994_24665345
H1_mix_00055518	chr20	+	1835	4	NNC	ENSG00000101463.6	novel	2092	4	NA	NA	20	-32031	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	23.2139804619735	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTTGTGTTTCATTGGT	-18	True	NA	1	True	AATAAA	-15	NA	24469648	24634585	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_24469754_24543019_24543578_24584855_24584994_24633551
H1_mix_00055519	chr20	+	1011	1	FSM	ENSG00000286444.1	ENST00000671041.1	1011	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGACATTTGATAAAGTTTA	NA	False	NA	NA	False	ATTAAA	-21	NA	24992311	24993322	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_24992300_24993300
H1_mix_00055521	chr20	+	4115	15	FSM	ENSG00000197586.13	ENST00000376652.9	4104	15	-11	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	75.9804284681528	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACGTGTCCAAAAATTTAT	-23	True	NA	NA	False	NA	NA	NA	25195700	25228075	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_25195868_25206521_25206591_25207075_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25221231_25221334_25222837_25222979_25224100_25224158_25225204_25225318_25225498
H1_mix_00055524	chr20	+	2625	14	NIC	ENSG00000197586.13	novel	2766	15	NA	NA	0	-14	combination_of_known_junctions	FALSE	canonical	3	67	junction_2	90.4370715211712	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCCTTCTCTGGGATTCC	2	True	NA	22	True	AATAAA	-15	NA	25195725	25226715	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_25195868_25206521_25206591_25207078_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25222837_25222979_25224100_25224158_25225204_25225318_25225498
H1_mix_00055525	chr20	+	2579	13	NIC	ENSG00000197586.13	novel	2708	14	NA	NA	4	-15	combination_of_known_junctions	FALSE	canonical	3	95	junction_1	85.9461637047027	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCCTTCTCTGGGATTC	-19	True	NA	21	True	AATAAA	-14	NA	25195704	25226714	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_25195868_25207075_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25222837_25222979_25224100_25224158_25225204_25225318_25225498
H1_mix_00055526	chr20	+	2515	14	NNC	ENSG00000197586.13	novel	2708	14	NA	NA	5	-14	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	118.448600692103	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCCTTCTCTGGGATTCC	17	True	NA	22	True	AATAAA	-15	NA	25195740	25226715	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_25195868_25209848_25209926_25210002_25210194_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25221231_25221334_25222837_25222979_25224100_25224158_25225204_25225318_25225498
H1_mix_00055527	chr20	+	2654	14	FSM	ENSG00000197586.13	ENST00000433259.6	2654	14	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_12	102.899790397772	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	33	True	NA	36	True	AATAAA	-29	NA	25195756	25226729	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_25195868_25206521_25206591_25207075_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25222837_25222979_25224100_25224158_25225161_25225318_25225498
H1_mix_00055528	chr20	+	2634	14	NIC	ENSG00000197586.13	novel	4104	15	NA	NA	-7	-15	combination_of_known_junctions	FALSE	canonical	3	82	junction_2	88.0249426727696	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCCTTCTCTGGGATTC	-5	True	NA	21	True	AATAAA	-14	NA	25195718	25226714	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_25195868_25206521_25206591_25207075_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25222837_25222979_25224100_25224158_25225204_25225318_25225498
H1_mix_00055529	chr20	+	2725	15	NIC	ENSG00000197586.13	novel	2766	15	NA	NA	-4	-14	combination_of_known_junctions	FALSE	canonical	3	62	junction_13	94.3530062897753	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCCTTCTCTGGGATTCC	47	False	NA	22	True	AATAAA	-15	NA	25195770	25226715	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_25195868_25206521_25206591_25207078_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25221231_25221334_25222837_25222979_25224100_25224158_25225161_25225318_25225498
H1_mix_00055532	chr20	+	2588	4	FSM	ENSG00000197586.13	ENST00000485936.5	2588	4	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_2	43.1508980207828	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	NA	False	NA	36	True	AATAAA	-29	NA	25221791	25226729	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_25222979_25224100_25224158_25225204_25225318_25225498
H1_mix_00055534	chr20	+	1918	2	FSM	ENSG00000197586.13	ENST00000490187.1	1918	2	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	NA	False	NA	36	True	AATAAA	-29	NA	25224630	25226729	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_25225318_25225498
H1_mix_00055535	chr20	+	4116	20	FSM	ENSG00000100994.12	ENST00000216962.9	4116	20	0	0	0	0	multi-exon	TRUE	canonical	3	305	junction_10	31.8025417545495	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGGTCTGTGTTTCACT	10	True	NA	34	True	ATTAAA	-24	NA	25248084	25298012	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_25248422_25259236_25259339_25269128_25269208_25271382_25271487_25274591_25274724_25276645_25276758_25277243_25277327_25278318_25278463_25279056_25279150_25280265_25280413_25280948_25281113_25282032_25282148_25283175_25283278_25284103_25284252_25288424_25288484_25290480_25290623_25292405_25292614_25294157_25294293_25295603_25295671_25296369
H1_mix_00055536	chr20	+	2219	3	FSM	ENSG00000100994.12	ENST00000471359.1	726	3	-117	-1376	-117	0	multi-exon	FALSE	canonical	3	362	junction_2	13.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGGTCTGTGTTTCACT	NA	False	NA	34	True	ATTAAA	-24	NA	25293783	25298012	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_25294293_25295603_25295671_25296369
H1_mix_00055537	chr20	+	3311	7	FSM	ENSG00000101003.10	ENST00000262460.5	3311	7	0	0	0	0	multi-exon	FALSE	canonical	3	484	junction_4	33.0689515339624	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATGCCTTTTATTTCT	-24	True	NA	24	True	AATAAA	-24	NA	25407672	25448563	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_25407896_25413789_25413855_25417103_25417203_25418104_25418196_25425210_25425328_25441701_25441777_25445922
H1_mix_00055539	chr20	+	510	5	NIC	ENSG00000213742.7	novel	4666	5	NA	NA	-11	-86	combination_of_known_splicesites	FALSE	canonical	3	6	junction_4	7.66077672302228	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTAGTTGCTGTTGCCTCT	3	True	NA	NA	False	NA	NA	NA	25624033	25676966	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_25624136_25634048_25634171_25634728_25634828_25673851_25674008_25676935
H1_mix_00055540	chr20	+	481	5	FSM	ENSG00000213742.7	ENST00000421829.1	481	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.83282518435822	4350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGCCCTCTGGATTCTGT	8070	False	NA	NA	False	NA	NA	NA	25632209	25674902	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_25632289_25634048_25634171_25645530_25645649_25673851_25674008_25674896
H1_mix_00055541	chr20	+	2816	1	FSM	ENSG00000278383.1	ENST00000611460.1	466	1	-2349	-1	-2349	1	mono-exon	FALSE	NA	NA	NA	NA	NA	273	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCTATGATATTTCGT	NA	False	NA	7	True	AATAAA	-19	NA	25678431	25681247	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_25678400_25681200
H1_mix_00055542	chr20	+	3500	8	NNC	ENSG00000149531.15	novel	761	9	NA	NA	-205	7325	at_least_one_novel_splicesite	FALSE	non_canonical	2	16	junction_1	43.9656637825103	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGATTTGCTAAGCACAA	-34	True	NA	9	True	AATAAA	-37	NA	30377166	30406582	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_30377722_30379584_30379652_30388452_30388579_30391196_30391309_30393550_30393656_30396861_30396954_30397934_30398045_30404249
H1_mix_00055543	chr20	+	1628	12	FSM	ENSG00000101294.18	ENST00000340852.9	1606	12	-22	0	-4	0	multi-exon	FALSE	canonical	3	796	junction_3	79.9821261024472	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTCTGTTTAAGCACCC	NA	False	NA	48	True	ATTAAA	-42	NA	31514405	31569567	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_31514735_31527483_31527583_31538178_31538262_31544946_31545036_31549028_31549115_31549206_31549333_31550063_31550122_31554745_31554830_31559610_31559648_31561633_31561737_31566209_31566296_31569119
H1_mix_00055544	chr20	+	4002	3	FSM	ENSG00000101294.18	ENST00000498035.5	3932	3	-55	-15	-8	15	multi-exon	FALSE	canonical	3	908	junction_2	16	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTCTCAAGGAAAGTCT	NA	False	NA	23	True	ATTAAA	-33	NA	31514401	31541748	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_31514735_31527483_31527583_31538178
H1_mix_00055545	chr20	+	1598	13	FSM	ENSG00000101294.18	ENST00000466766.2	1585	13	-13	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	351.799737856007	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCCTCCCCGGGAGCCAG	-34	True	NA	-13	True	AAGAAA	-11	NA	31514441	31569444	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_31514735_31527483_31527583_31527921_31528051_31538178_31538262_31544946_31545036_31549028_31549115_31549206_31549333_31550063_31550122_31554745_31554830_31559610_31559648_31561633_31561737_31566209_31566296_31569119
H1_mix_00055546	chr20	+	1715	13	FSM	ENSG00000101294.18	ENST00000398174.9	1715	13	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_12	341.59596829523	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCGGGCCACTGTGCTCCT	-34	True	NA	24	True	ATTAAA	-18	NA	31514441	31569543	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_31514735_31527483_31527583_31538178_31538262_31544946_31545036_31549028_31549115_31549206_31549333_31550063_31550122_31554745_31554830_31559610_31559648_31561633_31561737_31566209_31566296_31568077_31568225_31569119
H1_mix_00055550	chr20	+	812	1	FSM	ENSG00000278276.1	ENST00000611296.1	325	1	-613	126	-613	-126	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTCACTTTGGCAGCACA	6860	False	NA	NA	False	AATAAA	-11	NA	31580276	31581088	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_31580300_31581100
H1_mix_00055551	chr20	+	1340	1	FSM	ENSG00000125968.9	ENST00000376105.4	1233	1	-68	-39	-68	39	mono-exon	FALSE	NA	NA	NA	NA	NA	298	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGGTTGACCCCTGACCC	788	False	NA	56	True	NA	NA	NA	31605214	31606554	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_31605200_31606600
H1_mix_00055552	chr20	+	989	2	FSM	ENSG00000125968.9	ENST00000376112.4	983	2	-6	0	0	0	multi-exon	FALSE	canonical	3	628	junction_1	0	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGTTGTAGTGACTTCT	-5	True	NA	12	True	ATTAAA	-19	NA	31605282	31606510	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_31605814_31606052
H1_mix_00055553	chr20	+	1834	1	FSM	ENSG00000281376.1	ENST00000629058.1	1903	1	148	-79	148	79	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCGGCTGCGGCCTAGCG	NA	False	NA	NA	False	GGGGCT	-23	NA	31721654	31723488	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_31721700_31723500
H1_mix_00055554	chr20	+	3473	18	FSM	ENSG00000088325.16	ENST00000300403.11	3473	18	0	0	0	0	multi-exon	FALSE	canonical	3	828	junction_14	55.5342719707551	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTGTGTTATTTGATG	-8	True	NA	26	True	AATAAA	-20	NA	31739289	31801800	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_31739622_31742540_31742648_31757406_31757583_31760056_31760180_31766555_31766683_31770342_31770472_31771559_31771683_31775866_31775989_31777486_31777639_31778812_31778985_31782248_31782391_31783704_31783922_31792734_31792831_31793847_31794025_31794401_31794549_31797403_31797516_31798364_31798553_31800969
H1_mix_00055556	chr20	+	2152	7	NNC	ENSG00000101331.17	novel	2599	10	NA	NA	7827	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	15.1152976226809	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTATGACTCAGTTT	7834	False	NA	9	True	AATAAA	-21	NA	32018276	32032178	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_32018315_32018942_32019410_32022659_32022796_32025855_32025920_32028994_32029125_32029699_32029839_32031000
H1_mix_00055557	chr20	+	2416	7	NNC	ENSG00000101331.17	novel	2599	10	NA	NA	8109	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	14.7761068395343	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTATGACTCAGTTTAC	8116	False	NA	11	True	AATAAA	-23	NA	32018558	32032180	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_32018859_32018942_32019410_32022659_32022796_32025855_32025920_32028994_32029125_32029699_32029839_32031000
H1_mix_00055558	chr20	+	1007	5	ISM	ENSG00000101336.18	ENST00000262651.4	2160	14	34402	53	34356	-53	3prime_fragment	FALSE	canonical	2	4	junction_1	5.35607132140714	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCAAAATAGTGAAATGAAT	2662	False	NA	-43	True	NA	NA	NA	32086643	32101796	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_+_32086808_32088567_32088645_32093862_32094017_32099003_32099136_32101316
H1_mix_00055559	chr20	+	3897	18	FSM	ENSG00000101337.16	ENST00000398022.7	3768	18	-129	0	-129	0	multi-exon	FALSE	canonical	3	192	junction_1	39.534225897329	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGTCTTGAATCTCAT	-8	True	NA	20	True	AATAAA	-17	NA	32109584	32167256	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_32109756_32133012_32133127_32136073_32136174_32141496_32141666_32141765_32141896_32142981_32143106_32145090_32145210_32145311_32145424_32146784_32146856_32149633_32149767_32150621_32150704_32150799_32150876_32155102_32155187_32157793_32157970_32158450_32158515_32159991_32160112_32161275_32161366_32165294
H1_mix_00055560	chr20	+	566	6	FSM	ENSG00000101337.16	ENST00000442842.5	563	6	-3	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	135.453903598235	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCACCCGGCTGGAGCTC	-12	True	NA	-36	True	NA	NA	NA	32109713	32141785	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_32109756_32133012_32133127_32136073_32136174_32136876_32136998_32141496_32141666_32141765
H1_mix_00055561	chr20	+	564	6	FSM	ENSG00000101337.16	ENST00000450829.5	550	6	-14	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	135.214792090215	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAGAAGAAGGAAAAAGAT	-12	True	NA	6	True	NA	NA	NA	32109713	32141827	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_32109756_32133012_32133127_32136073_32136174_32136876_32136998_32141540_32141666_32141765
H1_mix_00055562	chr20	+	4054	18	FSM	ENSG00000101337.16	ENST00000217315.9	4032	18	-22	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	72.1263309232956	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCTTGAATCTCATGC	-12	True	NA	22	True	AATAAA	-19	NA	32109713	32167258	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_32110040_32133012_32133127_32136073_32136174_32141496_32141666_32141765_32141896_32142981_32143106_32145090_32145210_32145311_32145424_32146784_32146856_32149633_32149767_32150621_32150704_32150799_32150876_32155102_32155187_32157793_32157970_32158450_32158515_32159991_32160112_32161275_32161366_32165294
H1_mix_00055568	chr20	+	7542	11	NNC	ENSG00000171456.21	novel	7052	13	NA	NA	-19	1	intron_retention	FALSE	non_canonical	0	0	junction_2	23.5889804781809	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGTCTCAGTCATCTGT	-24	True	NA	17	True	AATAAA	-17	NA	32358310	32439320	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_32358833_32366383_32366467_32369011_32369124_32428127_32428249_32428324_32428423_32429337_32430054_32431320_32431485_32431582_32431680_32432879_32432986_32433283_32433918_32434431
H1_mix_00055570	chr20	+	901	4	NNC	ENSG00000171456.21	novel	1065	5	NA	NA	-26	0	intron_retention	FALSE	non_canonical	0	0	junction_2	34.7275107083707	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGTGAATAATGGCTACA	3	True	NA	NA	False	AATAAA	-20	NA	32358516	32372553	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_32358833_32366383_32366467_32369011_32369124_32372163
H1_mix_00055575	chr20	+	4237	22	FSM	ENSG00000088305.18	ENST00000353855.6	4237	22	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_9	490.875884299532	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTCTGATGTCCCTTT	37	False	NA	23	True	ATTAAA	-16	NA	32762423	32809356	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_32762700_32780317_32780466_32781352_32781415_32784757_32784860_32786501_32786628_32787229_32787452_32788853_32789013_32791600_32791709_32792625_32792771_32795408_32795535_32795649_32795695_32796789_32796870_32797186_32797300_32798459_32798644_32799243_32799329_32800152_32800299_32800834_32800926_32801277_32801427_32802384_32802471_32805337_32805408_32806208_32806328_32807761
H1_mix_00055576	chr20	+	4048	20	FSM	ENSG00000088305.18	ENST00000348286.6	4048	20	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_9	605.32142053678	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTCTGATGTCCCTTT	37	False	NA	23	True	ATTAAA	-16	NA	32762423	32809356	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_32762700_32780317_32780466_32781352_32781415_32784757_32784860_32786501_32786628_32787229_32787452_32788853_32789013_32791600_32791709_32792625_32792771_32795408_32795535_32795649_32795695_32796789_32796870_32797186_32797300_32798459_32798644_32799243_32799329_32800152_32800299_32800834_32800926_32801277_32801427_32802384_32802471_32807761
H1_mix_00055577	chr20	+	2562	7	FSM	ENSG00000101367.9	ENST00000375571.6	2562	7	0	0	0	0	multi-exon	FALSE	canonical	3	1281	junction_3	132.653265654822	210	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTCTTCTGAAATTTGT	-14	True	NA	22	True	AATAAA	-20	NA	32819953	32850405	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_32820029_32825924_32826049_32833716_32833863_32836633_32836842_32839734_32839857_32846617_32846771_32848671
H1_mix_00055582	chr20	+	7632	12	FSM	ENSG00000078699.22	ENST00000375279.6	7617	12	-21	6	0	0	multi-exon	TRUE	canonical	1	1	junction_2	41.3627372529654	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCCTCAAGCTGGAAT	-14	True	NA	4	True	AATAAA	-15	NA	33490095	33650030	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_33490302_33573973_33574262_33606955_33607100_33611093_33611336_33619516_33619607_33623114_33623297_33624763_33625018_33628349_33628436_33629718_33629915_33636639_33636709_33640340_33640532_33644346
H1_mix_00055583	chr20	+	1142	3	NNC	ENSG00000078699.22	novel	7617	12	NA	NA	0	-91991	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGGACACGTTTTC	7	True	NA	NA	False	AATAAA	-27	NA	33490116	33526555	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_33490302_33524599_33524674_33525672
H1_mix_00055584	chr20	+	3476	15	FSM	ENSG00000131061.14	ENST00000342427.6	3661	15	183	2	-156	-2	multi-exon	FALSE	canonical	3	43	junction_6	13.4998110342028	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCGGGTGGCCTGGGCCA	2249	False	NA	7	True	AATAAA	-17	NA	33731839	33792267	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_33732053_33740901_33741013_33745102_33745300_33748922_33749073_33753171_33753424_33757147_33757323_33758715_33758807_33761861_33762056_33766850_33767042_33770083_33770293_33781290_33781388_33783731_33783865_33788862_33788975_33789517_33789589_33790987
H1_mix_00055585	chr20	+	3347	15	FSM	ENSG00000131061.14	ENST00000375200.6	3343	15	-4	0	-4	0	multi-exon	FALSE	canonical	3	31	junction_6	15.3981180933362	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGGTGGCCTGGGCCAAG	-1	True	NA	9	True	AATAAA	-19	NA	33731991	33792269	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_33732053_33740901_33741013_33745102_33745300_33748922_33749073_33753171_33753424_33757147_33757344_33758715_33758807_33761861_33762056_33766850_33767042_33770083_33770293_33781290_33781388_33783731_33783865_33788862_33788975_33789517_33789589_33790987
H1_mix_00055586	chr20	+	3146	14	FSM	ENSG00000131061.14	ENST00000497876.5	3140	14	-6	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	22.8804456446855	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGGTGGCCTGGGCCAAG	3	True	NA	9	True	AATAAA	-19	NA	33731995	33792269	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_33732053_33740901_33741013_33748922_33749073_33753171_33753424_33757147_33757344_33758715_33758807_33761861_33762056_33766850_33767042_33770083_33770293_33781290_33781388_33783731_33783865_33788862_33788975_33789517_33789589_33790987
H1_mix_00055588	chr20	+	6430	9	FSM	ENSG00000125970.12	ENST00000375114.7	6430	9	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_4	386.022910589514	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGAGTGATTTGTTGT	-5	True	NA	17	True	AATAAA	-21	NA	33993645	34084884	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_33994132_34031521_34031605_34072065_34072331_34073562_34073636_34075873_34076041_34076701_34076816_34077027_34077246_34078504_34078554_34079909
H1_mix_00055589	chr20	+	6213	10	FSM	ENSG00000125970.12	ENST00000246194.8	6213	10	0	0	0	0	multi-exon	FALSE	canonical	3	1173	junction_5	124.939985593084	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGAGTGATTTGTTGT	-5	True	NA	17	True	AATAAA	-21	NA	33993910	34084884	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_33994132_34031521_34031605_34072065_34072331_34073562_34073636_34073818_34073867_34075873_34076041_34076701_34076816_34077027_34077246_34078504_34078554_34079909
H1_mix_00055590	chr20	+	6760	25	FSM	ENSG00000078747.16	ENST00000374864.10	6743	25	-17	0	15	0	multi-exon	FALSE	canonical	3	52	junction_7	6.73287436554569	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTTTTAAATCTATAAAT	0	True	NA	NA	False	NA	NA	NA	34363255	34511773	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_34363350_34369393_34369471_34393790_34393882_34408650_34408793_34412514_34412640_34413741_34413880_34424479_34424526_34438473_34438632_34440154_34440345_34442207_34442304_34445286_34445462_34449410_34449481_34457389_34457475_34462092_34462222_34470047_34470121_34471443_34471516_34477771_34477861_34479629_34479790_34480598_34480733_34481065_34481207_34489265_34489387_34489821_34489927_34492500_34492598_34504330_34504404_34507694
H1_mix_00055592	chr20	+	3164	26	FSM	ENSG00000078747.16	ENST00000665346.1	3159	26	-5	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	19.4231202436684	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAAAAGTCTCACTTGGG	20	True	NA	-3	True	NA	NA	NA	34363310	34508088	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_34363350_34369393_34369471_34393769_34393882_34408650_34408793_34412514_34412640_34413741_34413880_34417116_34417240_34424479_34424526_34438473_34438632_34440154_34440345_34442207_34442304_34445286_34445462_34449410_34449481_34457389_34457475_34462092_34462222_34470047_34470121_34471443_34471516_34477771_34477861_34479629_34479790_34480598_34480733_34481065_34481207_34489265_34489387_34489821_34489927_34492500_34492598_34504330_34504404_34507694
H1_mix_00055593	chr20	+	670	4	FSM	ENSG00000125971.17	ENST00000357156.7	662	4	-8	0	0	0	multi-exon	FALSE	canonical	3	611	junction_1	110.091880818806	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTCTGTTGTGTCTTTAA	2	True	NA	27	True	ACTAAA	-18	NA	34516413	34540958	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_34516462_34526267_34526344_34534627_34534796_34540580
H1_mix_00055594	chr20	+	1053	5	FSM	ENSG00000125971.17	ENST00000480759.1	1053	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	372.317992447316	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTCTGTTGTGTCTTTAA	2	True	NA	27	True	ACTAAA	-18	NA	34516413	34540958	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_34516462_34526267_34526344_34529851_34530235_34534627_34534796_34540580
H1_mix_00055598	chr20	+	1527	6	FSM	ENSG00000131069.20	ENST00000476922.5	1527	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	41.0706708004629	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGACTTGTTTTCTTAG	9	False	NA	18	True	AATAAA	-18	NA	34876621	34927962	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_34876824_34882793_34882990_34923322_34923432_34925697_34925767_34926876_34926952_34927086
H1_mix_00055600	chr20	+	1349	4	FSM	ENSG00000101000.6	ENST00000216968.5	1349	4	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_2	2.86744175568088	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTATCTCCTCCACTTTG	-11	True	NA	14	True	AATAAA	-19	NA	35172071	35177362	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_35172225_35174701_35174954_35176167_35176447_35176697
H1_mix_00055602	chr20	+	1388	9	NIC	ENSG00000126001.16	novel	2156	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	12.7769323391806	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTAACTCATTCATTTA	0	True	NA	7	True	AATAAA	-20	NA	35455174	35470132	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_35455243_35459982_35460106_35462264_35462554_35463574_35463632_35465742_35465826_35466038_35466205_35466965_35467073_35467303_35467556_35469889
H1_mix_00055603	chr20	+	8480	35	FSM	ENSG00000126001.16	ENST00000397527.6	15434	35	-351	7305	46	335	multi-exon	FALSE	canonical	3	11	junction_1	17.7811571663098	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTGCTGTCTCCACT	72	False	NA	22	True	AATAAA	-22	NA	35455246	35511975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_35455752_35458303_35458375_35459982_35460106_35462264_35462554_35463574_35463632_35465742_35465826_35466038_35466205_35466965_35467073_35467303_35467556_35469889_35469987_35472049_35472152_35472672_35472832_35473373_35473553_35473869_35474053_35475501_35475647_35476448_35476596_35477870_35478102_35479230_35479425_35479645_35479774_35479975_35480146_35490636_35490805_35491211_35491347_35493428_35493573_35494523_35494658_35496576_35496716_35497718_35498068_35498594_35498717_35500048_35500170_35501844_35501967_35502389_35505006_35507737_35507852_35508034_35508191_35508942_35509045_35509997_35510055_35511362
H1_mix_00055608	chr20	+	1378	13	FSM	ENSG00000125991.21	ENST00000348547.7	1302	13	-9	-67	0	67	multi-exon	FALSE	canonical	3	787	junction_1	98.3413485433942	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTGACAGATCGGGGCC	1	True	NA	102	True	NA	NA	NA	35542068	35557701	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_35542186_35542322_35542394_35542512_35542601_35542821_35542942_35547411_35547506_35548508_35548675_35548807_35548866_35555043_35555076_35556032_35556130_35556206_35556272_35556972_35557110_35557193_35557250_35557424
H1_mix_00055609	chr20	+	601	5	FSM	ENSG00000125991.21	ENST00000411577.5	601	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	415.830794915432	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTGGGTCAGGAATTTAG	48	False	NA	NA	False	AATAAA	-18	NA	35542115	35543909	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_35542186_35542322_35542394_35542512_35542601_35542821_35542942_35543657
H1_mix_00055614	chr20	+	833	3	FSM	ENSG00000125991.21	ENST00000488384.1	766	3	0	-67	0	67	multi-exon	FALSE	canonical	3	1110	junction_2	19	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTGACAGATCGGGGCC	3420	False	NA	102	True	NA	NA	NA	35556609	35557701	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_35557110_35557193_35557250_35557424
H1_mix_00055616	chr20	+	366	3	FSM	ENSG00000125995.16	ENST00000374077.8	366	3	0	0	0	0	multi-exon	FALSE	canonical	3	1807	junction_1	954.5	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGTCCCTCTCTTAAA	3	True	NA	16	True	AATAAA	-17	NA	35699404	35700980	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_35699457_35699632_35699764_35700797
H1_mix_00055617	chr20	+	498	3	FSM	ENSG00000125995.16	ENST00000374078.5	498	3	0	0	0	0	multi-exon	FALSE	canonical	3	822	junction_1	1447	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCCCTCTCTTAAAGGAA	28	False	NA	20	True	AATAAA	-21	NA	35699271	35700984	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_35699452_35699632_35699764_35700797
H1_mix_00055619	chr20	+	505	2	FSM	ENSG00000125995.16	ENST00000336695.4	496	2	-9	0	0	0	multi-exon	FALSE	canonical	3	3716	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGTCCCTCTCTTAAA	40	False	NA	16	True	AATAAA	-17	NA	35699441	35700980	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_35699764_35700797
H1_mix_00055620	chr20	+	350	3	FSM	ENSG00000125995.16	ENST00000374072.5	350	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	898.5	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCAGTGTCCCTCTCTTA	40	False	NA	14	True	AATAAA	-15	NA	35699441	35700978	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_35699457_35699632_35699764_35700774
H1_mix_00055621	chr20	+	639	2	FSM	ENSG00000025293.17	ENST00000617560.1	618	2	-21	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATACTTTGTCTCTTTCT	-25	True	NA	12	True	AATAAA	-22	NA	35772011	35775058	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_35772080_35774487
H1_mix_00055622	chr20	+	1828	12	FSM	ENSG00000025293.17	ENST00000374000.8	1814	12	-14	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	94.5670429898001	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAAACCTGGTAATTTT	-25	True	NA	NA	False	AAAAAG	-14	NA	35772011	35913335	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_35772080_35800093_35800174_35801490_35801606_35842572_35842745_35847349_35847435_35858301_35858382_35863012_35863401_35869437_35869552_35870954_35871135_35871649_35871830_35899369_35899649_35913248
H1_mix_00055623	chr20	+	5915	18	FSM	ENSG00000025293.17	ENST00000374012.8	5879	18	-36	0	5	0	multi-exon	FALSE	canonical	3	191	junction_10	29.2432821374929	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCAGTTACGTATTGTT	2663	False	NA	7	True	AATAAA	-18	NA	35771978	35950370	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_35772080_35801490_35801606_35842572_35842745_35847349_35847435_35858301_35858382_35863012_35863401_35869437_35869552_35870954_35871135_35871649_35871830_35899369_35899649_35913248_35913348_35914032_35914198_35917483_35917663_35927779_35927880_35931248_35931445_35938696_35939109_35940863_35941048_35947484
H1_mix_00055624	chr20	+	446	3	FSM	ENSG00000025293.17	ENST00000485604.1	446	3	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	32.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATGACTTTT	NA	False	NA	NA	False	NA	NA	NA	35869529	35871893	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_35869552_35870954_35871135_35871649
H1_mix_00055625	chr20	+	4259	18	NNC	ENSG00000088367.23	novel	6276	22	NA	NA	-126	1038	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_10	32.6018234571866	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGATTACCTGCTTGT	0	True	NA	4	True	AATAAA	-16	NA	36154613	36231381	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_36154897_36175550_36175716_36177951_36178057_36178629_36178673_36182271_36182348_36185116_36185336_36187675_36187764_36188346_36188500_36190276_36190375_36190621_36190798_36194214_36194361_36197858_36198042_36212271_36212377_36218875_36218963_36219760_36219845_36221863_36221945_36222277_36222395_36229331
H1_mix_00055627	chr20	+	765	6	FSM	ENSG00000088367.23	ENST00000373945.5	763	6	-2	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	27.3276416838336	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGGGTGCCAGCCAGG	-3	True	NA	NA	False	NA	NA	NA	36154739	36185335	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_36154897_36175550_36175716_36177951_36178057_36178629_36178673_36182271_36182348_36185116
H1_mix_00055628	chr20	+	6276	22	FSM	ENSG00000088367.23	ENST00000338074.7	6276	22	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	48.8723637294938	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTGGCACCTCTCCTC	-3	True	NA	18	True	AATAAA	-22	NA	36154739	36232799	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_36154897_36173763_36173955_36175550_36175716_36177951_36178057_36178629_36178673_36182271_36182348_36185116_36185336_36187675_36187764_36188346_36188500_36190276_36190375_36190621_36190798_36194211_36194361_36195328_36195365_36197858_36198042_36209487_36209899_36212271_36212377_36214356_36214441_36218875_36218963_36219760_36219845_36221863_36221945_36222277_36222395_36229331
H1_mix_00055631	chr20	+	3187	5	FSM	ENSG00000131043.13	ENST00000680639.1	3187	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	120.110365914021	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGAGACAATCCCCTTG	3501	False	NA	17	True	ATTAAA	-7	NA	36236130	36256921	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_36236783_36236881_36237038_36239820_36240626_36244696_36244927_36255577
H1_mix_00055633	chr20	+	3645	4	FSM	ENSG00000131043.13	ENST00000373932.3	2689	4	-354	-602	0	602	multi-exon	FALSE	canonical	3	11	junction_1	115.034294403403	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACTTGAAAATGATTAATT	3501	False	NA	5	True	ACTAAA	-16	NA	36236130	36257535	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_36236783_36239820_36240626_36244696_36244927_36255577
H1_mix_00055634	chr20	+	2953	4	FSM	ENSG00000131043.13	ENST00000679667.1	2952	4	-1	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	109.849391845785	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGAGACAATCCCCTTG	4	True	NA	17	True	ATTAAA	-7	NA	36236463	36256921	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_36237038_36239820_36240626_36244696_36244927_36255577
H1_mix_00055635	chr20	+	2883	4	FSM	ENSG00000131043.13	ENST00000680811.1	2863	4	-20	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	116.448367194316	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAGACAATCCCCTTGT	4	True	NA	18	True	ATTAAA	-8	NA	36236463	36256922	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_36236967_36239820_36240626_36244696_36244927_36255577
H1_mix_00055636	chr20	+	3146	7	FSM	ENSG00000080845.19	ENST00000475894.5	3110	7	-36	0	-36	0	multi-exon	FALSE	canonical	3	330	junction_1	47.8249121507005	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTGTGGCATTATTGCA	NA	False	NA	27	True	AATAAA	-19	NA	36461301	36528637	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_36461511_36496704_36497067_36499587_36499677_36500198_36500612_36524249_36524342_36525850_36526007_36526812
H1_mix_00055637	chr20	+	4235	7	FSM	ENSG00000080845.19	ENST00000340491.8	2392	7	-445	-1398	-36	0	multi-exon	FALSE	canonical	3	27	junction_1	155.766295741052	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTGTGGCATTATTGCA	NA	False	NA	27	True	AATAAA	-19	NA	36461301	36528637	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_36462600_36496704_36497067_36499587_36499677_36500198_36500612_36524249_36524342_36525850_36526007_36526812
H1_mix_00055638	chr20	+	3249	8	NIC	ENSG00000080845.19	novel	3110	7	NA	NA	-36	0	intron_retention	FALSE	canonical	2	10	junction_1	192.551079891407	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTGTGGCATTATTGCA	NA	False	NA	27	True	AATAAA	-19	NA	36461301	36528637	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_36461511_36465264_36465368_36496704_36497067_36499587_36499677_36500198_36500612_36524249_36524342_36525850_36526007_36526812
H1_mix_00055639	chr20	+	1024	3	FSM	ENSG00000101335.10	ENST00000346786.2	1024	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	400	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTGTGTGTCTGTGGCT	1	True	NA	29	True	AATAGA	-18	NA	36541496	36549825	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_36541562_36544858_36545069_36549076
H1_mix_00055641	chr20	+	3416	3	FSM	ENSG00000118707.11	ENST00000373872.9	3416	3	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_1	90	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGTTCTTGATTGATCCA	-22	True	NA	38	True	AATAAA	-28	NA	36573596	36593950	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_36573746_36578740_36578967_36590909
H1_mix_00055644	chr20	+	1069	4	FSM	ENSG00000101084.19	ENST00000344795.8	1069	4	0	0	0	0	multi-exon	FALSE	canonical	3	1074	junction_2	42.4970587217516	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTGATGATACCTGATA	2	True	NA	36	True	AATAAA	-20	NA	36605778	36612557	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_36606066_36607714_36607819_36609600_36609731_36612009
H1_mix_00055645	chr20	+	1313	5	FSM	ENSG00000101084.19	ENST00000483815.5	1170	5	-143	0	-133	0	multi-exon	FALSE	canonical	3	73	junction_2	529.512275589528	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTGATGATACCTGATA	8832	False	NA	36	True	AATAAA	-20	NA	36605645	36612557	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_36606066_36607714_36607819_36607889_36608001_36609600_36609731_36612009
H1_mix_00055646	chr20	+	1201	4	FSM	ENSG00000101084.19	ENST00000492721.5	1044	4	-107	-50	-101	50	multi-exon	FALSE	canonical	3	14	junction_3	518.868641051535	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAGTAGGAGCACTGGAG	-5	True	NA	86	True	GATAAA	-29	NA	36605677	36612607	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_36606066_36607714_36607819_36607889_36608001_36612009
H1_mix_00055649	chr20	+	1073	9	FSM	ENSG00000118705.17	ENST00000373632.8	1073	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	1174.84748345264	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCCTGATCATATTTT	-15	True	NA	NA	False	NA	NA	NA	37179317	37210165	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_37179370_37184179_37184374_37198396_37198493_37199049_37199226_37200446_37200495_37203884_37203961_37204766_37204902_37207272_37207450_37210046
H1_mix_00055651	chr20	+	520	5	FSM	ENSG00000118705.17	ENST00000437329.5	520	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	1329.93145970009	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAAAAGTCCAGATT	270	False	NA	43	True	AAGAAA	-26	NA	37228633	37241418	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_37228745_37229972_37230060_37234019_37234096_37236579_37236710_37241302
H1_mix_00055652	chr20	+	511	4	FSM	ENSG00000118705.17	ENST00000470352.1	511	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	1528.08180409296	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAAAAGTCCAGAT	1506	False	NA	42	True	AAGAAA	-25	NA	37229869	37241417	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_37230060_37234019_37234096_37236579_37236710_37241302
H1_mix_00055654	chr20	+	1554	5	FSM	ENSG00000101363.13	ENST00000397152.7	1539	5	-15	0	-1	0	multi-exon	FALSE	canonical	1	9	junction_1	169.977204353996	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGTGTTGTCTTTTG	-1	True	NA	21	True	AATAAA	-21	NA	37289647	37317260	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_37289687_37297295_37297535_37298762_37298880_37301207_37301414_37316307
H1_mix_00055655	chr20	+	1298	4	NIC	ENSG00000101363.13	novel	1539	5	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	97	junction_1	145.749404420357	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGTGTTGTCTTTTG	16	True	NA	21	True	AATAAA	-21	NA	37289664	37317260	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_37289687_37298762_37298880_37301207_37301414_37316307
H1_mix_00055656	chr20	+	1505	5	NNC	ENSG00000101363.13	novel	1539	5	NA	NA	-9	-6	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	162.241139973806	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAACCTGCCTGTGTTGT	-9	True	NA	15	True	AATAAA	-15	NA	37289639	37317254	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_37289687_37297346_37297535_37298762_37298880_37301207_37301414_37316307
H1_mix_00055657	chr20	+	1915	4	FSM	ENSG00000101363.13	ENST00000373605.7	1915	4	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	143.722726881389	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGTGTTGTCTTTTG	2400	False	NA	21	True	AATAAA	-21	NA	37296895	37317260	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_37297535_37298762_37298880_37301207_37301414_37316307
H1_mix_00055659	chr20	+	4644	14	FSM	ENSG00000197122.13	ENST00000373578.7	4644	14	0	0	0	0	multi-exon	TRUE	canonical	3	88	junction_4	8.79819777134321	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTCTGTTCAGTATTA	1	True	NA	NA	False	ATTAAA	-21	NA	37346139	37406050	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_37346256_37365203_37365278_37382618_37382787_37384149_37384404_37386074_37386175_37393894_37393994_37394173_37394278_37396161_37396312_37397698_37397855_37400114_37400295_37401601_37401679_37402434_37402589_37402748_37402881_37403170
H1_mix_00055660	chr20	+	551	4	FSM	ENSG00000197122.13	ENST00000489153.1	551	4	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	2.62466929133727	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCCGCAGACTCAGGGC	9994	False	NA	NA	False	NA	NA	NA	37393744	37397746	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_37393994_37394173_37394278_37396161_37396312_37397698
H1_mix_00055662	chr20	+	1268	3	FSM	ENSG00000053438.11	ENST00000649451.1	1259	3	-9	0	0	0	multi-exon	FALSE	canonical	3	296	junction_2	50.5	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTCTTGTGATTTCT	9	True	NA	54	True	NA	NA	NA	37521240	37523690	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_37521404_37522357_37522439_37522666
H1_mix_00055664	chr20	+	780	7	FSM	ENSG00000132792.19	ENST00000447935.3	778	7	-2	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	254.123329638714	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCACTGCTGGTACAGAAT	-39	True	NA	NA	False	NA	NA	NA	37694029	37765212	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_37694153_37694926_37695034_37732878_37733068_37737377_37737485_37746467_37746608_37757558_37757657_37765196
H1_mix_00055665	chr20	+	1054	9	FSM	ENSG00000132792.19	ENST00000373469.1	1130	9	72	4	72	-3	multi-exon	FALSE	canonical	3	443	junction_1	54.5045869629337	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTTTTCTTTGTAGTTA	78	False	NA	21	True	ATTAAA	-21	NA	37777344	37872125	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_37777418_37777653_37777713_37779186_37779336_37802866_37803049_37840101_37840200_37842338_37842420_37859898_37860037_37860271_37860345_37871924
H1_mix_00055666	chr20	+	2001	4	FSM	ENSG00000132821.12	ENST00000373461.9	1936	4	-69	4	-53	-4	multi-exon	FALSE	canonical	2	8	junction_2	0.942809041582063	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCTCTGGGCAGTGTCT	73	False	NA	NA	False	AATAAA	-12	NA	37903057	37945346	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_37903472_37931634_37931805_37933538_37933590_37943980
H1_mix_00055668	chr20	+	3672	7	FSM	ENSG00000101413.12	ENST00000373433.9	3672	7	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_5	7.06517279807555	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTGATTTTTTTTTT	-2	True	NA	14	True	AATAAA	-19	NA	38033745	38092364	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_38034099_38040434_38040565_38048347_38048482_38057531_38057645_38059393_38059521_38066080_38066257_38089725
H1_mix_00055671	chr20	+	1285	4	FSM	ENSG00000174365.21	ENST00000453698.6	1323	4	38	0	-4	0	multi-exon	FALSE	canonical	3	19	junction_3	17.2046505340853	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCTTGTTCTTTCATT	NA	False	NA	33	True	AATAAA	-15	NA	38446615	38450922	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_38447013_38447465_38447624_38448661_38448731_38450261
H1_mix_00055672	chr20	+	2705	3	FSM	ENSG00000174365.21	ENST00000661733.1	2683	3	-22	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	12	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTTGTTCCTGTTGACT	NA	False	NA	-44	True	NA	NA	NA	38446649	38450845	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_38447013_38447465_38447624_38448661
H1_mix_00055673	chr20	+	1028	5	FSM	ENSG00000174365.21	ENST00000669083.1	1005	5	-22	-1	0	0	multi-exon	FALSE	canonical	3	13	junction_1	25.4103817366052	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCTTGTTCTTTCATT	NA	False	NA	33	True	AATAAA	-15	NA	38446649	38450922	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_38446949_38447465_38447624_38448661_38448731_38450335_38450448_38450532
H1_mix_00055674	chr20	+	1256	6	FSM	ENSG00000174365.21	ENST00000432153.6	1234	6	-22	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	30.9748284902435	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCTTGTTCTTTCATT	NA	False	NA	33	True	AATAAA	-15	NA	38446649	38450922	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_38447013_38447465_38447624_38447929_38448094_38448661_38448731_38450335_38450448_38450532
H1_mix_00055675	chr20	+	1598	3	FSM	ENSG00000174365.21	ENST00000669338.2	1607	3	8	1	0	0	multi-exon	FALSE	canonical	3	61	junction_1	5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTTGTTCTTTCA	-10	True	NA	31	True	AATAAA	-13	NA	38446679	38450920	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_38447624_38448661_38448731_38450335
H1_mix_00055677	chr20	+	8633	30	FSM	ENSG00000170471.15	ENST00000262879.11	8633	30	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_24	16.3909577462175	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTTTGTGTGTGCTTTTG	-2	True	NA	20	True	ATTAAA	-23	NA	38472842	38578858	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_38473070_38488402_38488619_38492929_38493133_38497352_38497517_38499446_38499634_38509076_38509209_38516191_38516371_38517505_38517655_38517783_38518001_38521496_38521699_38524777_38524946_38525403_38525519_38525894_38526043_38531166_38531232_38532729_38532860_38535073_38535208_38539775_38539959_38541040_38541193_38546242_38546431_38548688_38548796_38551070_38551224_38553866_38554077_38558294_38558454_38562531_38562698_38565358_38565479_38567095_38567233_38569887_38569997_38570768_38570848_38574149_38574299_38574773
H1_mix_00055678	chr20	+	8636	30	NIC	ENSG00000170471.15	novel	8633	30	NA	NA	0	0	intron_retention	FALSE	canonical	3	78	junction_24	16.1940521369284	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTTTGTGTGTGCTTTTG	-2	True	NA	20	True	ATTAAA	-23	NA	38472842	38578858	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_38473070_38488402_38488619_38492929_38493133_38497352_38497517_38499446_38499634_38509076_38509209_38516191_38516371_38517505_38517655_38517783_38518001_38521496_38521699_38524777_38524946_38525403_38525519_38525894_38526043_38531166_38531232_38532729_38532860_38535073_38535208_38539775_38539959_38541040_38541193_38546242_38546431_38548688_38548796_38551070_38551224_38553866_38554077_38558294_38558454_38562531_38562698_38565355_38565479_38567095_38567233_38569887_38569997_38570768_38570848_38574149_38574299_38574773
H1_mix_00055682	chr20	+	2450	4	FSM	ENSG00000101447.15	ENST00000619304.4	2475	4	25	0	25	0	multi-exon	FALSE	canonical	3	427	junction_3	34.4512538072113	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTCCCCCCCTCTGACA	NA	False	NA	14	True	AATAAA	-21	NA	38926336	38953106	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_38926926_38941958_38942127_38947875_38948001_38951538
H1_mix_00055684	chr20	+	3369	22	FSM	ENSG00000101452.15	ENST00000252011.8	3314	22	-75	20	-30	0	multi-exon	FALSE	canonical	3	73	junction_12	13.8882811658425	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAATGTCTTCCCTCCCA	NA	False	NA	4	True	AGTAAA	-14	NA	38962268	39039701	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_38962408_38969080_38969215_38972558_38972652_38983698_38983777_38988812_38988918_38991453_38991516_38992355_38992426_38994820_38994881_39001729_39001843_39002771_39002869_39003748_39003908_39006145_39006357_39010279_39010405_39014879_39014935_39018803_39018900_39021840_39021936_39023689_39023768_39025229_39025360_39028417_39028500_39030703_39030776_39034205_39034318_39038498
H1_mix_00055692	chr20	+	670	3	Intergenic	novelGene_803	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	622	junction_2	33	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGTGGTCTCTTCACA	10	False	NA	13	True	AATAAA	-25	NA	40269409	40274728	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_40269649_40271517_40271583_40274362
H1_mix_00055693	chr20	+	687	3	Intergenic	novelGene_804	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	628	junction_2	30	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGGTGGTCTCTTCAC	11	False	NA	12	True	AATAAA	-24	NA	40269410	40274727	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_40269649_40271517_40271602_40274362
H1_mix_00055694	chr20	+	3739	21	FSM	ENSG00000198900.7	ENST00000361337.3	3734	21	-5	0	-5	0	multi-exon	FALSE	canonical	3	197	junction_1	39.328456618586	857	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAAGTGTCTGCCTCTTTG	-6	True	NA	6	True	AATAAA	-21	NA	41028816	41124487	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_41029101_41029430_41029456_41061393_41061491_41076170_41076295_41077581_41077638_41080084_41080181_41081164_41081241_41084461_41084569_41092471_41092588_41097219_41097342_41098214_41098338_41100055_41100244_41101208_41101354_41112781_41112926_41113969_41114156_41115370_41115440_41116277_41116393_41118168_41118297_41121695_41121791_41122005_41122156_41123194
H1_mix_00055695	chr20	+	5296	33	FSM	ENSG00000124181.15	ENST00000244007.7	5285	33	-11	0	-11	0	multi-exon	FALSE	canonical	3	31	junction_1	17.6329769182631	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGACTTGTATGCTCTTT	-25	True	NA	20	True	AATAAA	-21	NA	41136948	41175721	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_41137036_41137520_41137859_41159605_41159759_41159869_41159964_41160105_41160154_41162451_41162537_41162641_41162726_41162957_41162993_41163202_41163276_41163377_41163480_41163714_41163834_41163920_41164007_41164080_41164202_41164932_41165102_41165244_41165368_41165449_41165552_41165638_41165827_41166193_41166395_41166475_41166596_41166678_41166860_41167851_41167930_41168766_41168871_41169078_41169176_41169456_41169527_41170111_41170270_41172192_41172290_41172420_41172646_41172728_41172878_41173419_41173535_41173651_41173814_41173922_41174012_41174123_41174312_41174466
H1_mix_00055696	chr20	+	7280	32	FSM	ENSG00000124181.15	ENST00000373271.5	7395	32	0	115	0	-115	multi-exon	FALSE	canonical	3	37	junction_30	17.2939933513165	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTCTGTTGAGGGTGGG	263	False	NA	NA	False	NA	NA	NA	41137236	41177511	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_41137859_41159605_41159759_41159869_41159964_41160105_41160154_41162451_41162537_41162641_41162726_41162957_41162993_41163202_41163276_41163377_41163480_41163714_41163834_41163920_41164007_41164080_41164202_41164932_41165102_41165244_41165368_41165449_41165552_41165638_41165827_41166193_41166395_41166475_41166596_41166678_41166860_41167851_41167930_41168766_41168871_41169078_41169176_41169456_41169527_41170111_41170270_41172192_41172290_41172420_41172646_41172728_41172878_41173419_41173535_41173651_41173814_41173922_41174012_41174126_41174312_41174466
H1_mix_00055699	chr20	+	1077	6	FSM	ENSG00000124193.16	ENST00000670741.1	1077	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	86.9275560452495	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGTTTTGAGTTTATTG	-4	True	NA	28	True	AATAAA	-18	NA	43457892	43463605	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_43458141_43458360_43458510_43459770_43459896_43460032_43460242_43460514_43460599_43463343
H1_mix_00055700	chr20	+	4356	6	FSM	ENSG00000124193.16	ENST00000244020.5	4353	6	-3	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	18.8785592670627	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGCACCTAGTGTAGTAA	-4	True	NA	104	True	AATAAA	-18	NA	43457892	43464243	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_43458141_43458360_43458510_43459770_43459896_43460032_43460242_43460514_43460599_43460702
H1_mix_00055714	chr20	+	1827	16	NNC	ENSG00000101052.13	novel	1754	14	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	136.993852254601	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACCCTATGAAACAGTCT	28	True	NA	28	True	ATTAAA	-23	NA	43590989	43647213	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_43591055_43594692_43594818_43596434_43596523_43603759_43603890_43604182_43604259_43605001_43605074_43613849_43613977_43617787_43617887_43618240_43618354_43618939_43619027_43620856_43620926_43623890_43624046_43635925_43636014_43637144_43637254_43642478_43642625_43646935
H1_mix_00055715	chr20	+	1599	14	FSM	ENSG00000101052.13	ENST00000373039.4	1599	14	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	61.9731761023511	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACAGTCTTGATTTTTT	28	True	NA	37	True	ATTAAA	-32	NA	43590989	43647222	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_43591030_43594692_43594818_43596434_43596523_43603759_43603890_43604182_43604259_43605001_43605074_43613849_43613977_43618939_43619027_43620856_43620926_43623890_43624046_43635925_43636014_43637144_43637254_43642478_43642625_43646935
H1_mix_00055716	chr20	+	2691	13	FSM	ENSG00000101057.16	ENST00000396863.8	2704	13	0	13	0	0	multi-exon	FALSE	canonical	3	34	junction_2	508.991834413874	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTGGTCTGGACTCTGC	9416	False	NA	17	True	AATAAA	-15	NA	43667018	43716482	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_43667304_43673805_43673900_43682793_43682887_43686851_43687073_43692156_43692320_43699756_43700045_43702489_43702904_43705218_43705359_43709962_43710063_43711487_43711602_43713001_43713107_43715133_43715284_43715958
H1_mix_00055717	chr20	+	2668	14	FSM	ENSG00000101057.16	ENST00000217026.5	2668	14	0	0	0	0	multi-exon	FALSE	canonical	3	1635	junction_2	129.143422862487	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTGGTCTGGACTCTGC	-2	True	NA	17	True	AATAAA	-15	NA	43667113	43716482	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_43667304_43673805_43673900_43681783_43681856_43682793_43682887_43686851_43687073_43692156_43692320_43699756_43700045_43702489_43702904_43705218_43705359_43709962_43710063_43711487_43711602_43713001_43713107_43715133_43715284_43715958
H1_mix_00055721	chr20	+	1457	3	FSM	ENSG00000223891.7	ENST00000439943.5	1441	3	-16	0	1	0	multi-exon	FALSE	canonical	3	11	junction_1	3.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTCTGTTTCTATG	NA	False	NA	17	True	AATAAA	-32	NA	44210943	44226027	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_44211078_44214887_44215004_44224820
H1_mix_00055722	chr20	+	1538	3	FSM	ENSG00000223891.7	ENST00000655968.1	1627	3	89	0	2	0	multi-exon	FALSE	canonical	2	7	junction_1	5.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAGACTCCATCTCAAAA	57	False	NA	-41	True	NA	NA	NA	44211083	44225969	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_44211357_44214887_44215004_44224820
H1_mix_00055724	chr20	+	1464	2	FSM	ENSG00000223891.7	ENST00000442383.1	1482	2	18	0	18	0	multi-exon	FALSE	canonical	1	2	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTCTGTTTCTATG	0	True	NA	17	True	AATAAA	-32	NA	44211099	44226027	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_44211357_44224820
H1_mix_00055725	chr20	+	2616	6	FSM	ENSG00000124194.17	ENST00000617075.4	2645	6	-1	30	-1	-30	multi-exon	FALSE	canonical	2	3	junction_1	22.6750964716801	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTGTAGAATATAAGGC	7913	False	NA	NA	False	ATTAAA	-10	NA	44247097	44280887	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_44247203_44257152_44257346_44258433_44258608_44263229_44263328_44264444_44264560_44278956
H1_mix_00055726	chr20	+	2718	6	FSM	ENSG00000124194.17	ENST00000342560.10	2778	6	0	60	0	-30	multi-exon	FALSE	canonical	3	37	junction_2	10.36532681588	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTGTAGAATATAAGGC	-3	True	NA	NA	False	ATTAAA	-10	NA	44247307	44280887	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_44247515_44257152_44257346_44258433_44258608_44263229_44263328_44264444_44264560_44278956
H1_mix_00055727	chr20	+	5207	10	FSM	ENSG00000101076.19	ENST00000316673.8	1470	10	0	-3737	0	563	multi-exon	FALSE	canonical	3	23	junction_3	5.73488351136175	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCTCACCTCTGTAATC	-8	True	NA	NA	False	NA	NA	NA	44355699	44433408	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_44355854_44406057_44406233_44407380_44407476_44413693_44413801_44414506_44414663_44418424_44418513_44419720_44419877_44424017_44424255_44428334_44428488_44429522
H1_mix_00055728	chr20	+	4673	11	NNC	ENSG00000101076.19	novel	1470	10	NA	NA	-19	23602	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	11.2089250153616	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTGGGGGGAGCCGGGCGC	241	False	NA	NA	False	TATAAA	-14	NA	44355680	44456447	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_44355854_44406057_44406233_44407380_44407476_44413693_44413801_44414506_44414663_44418424_44418513_44419720_44419877_44424017_44424255_44428334_44428488_44429522_44432841_44456432
H1_mix_00055729	chr20	+	6359	10	FSM	ENSG00000101076.19	ENST00000316099.10	4739	10	-5	-1615	-5	1615	multi-exon	FALSE	canonical	3	5	junction_1	10.4609798186132	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCGATAACGTTGCAACG	-8	True	NA	NA	False	NA	NA	NA	44401233	44434460	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_44401488_44406057_44406233_44407380_44407476_44413693_44413801_44414506_44414663_44418424_44418513_44419720_44419877_44424017_44424255_44428334_44428488_44429522
H1_mix_00055730	chr20	+	6224	5	FSM	ENSG00000124120.11	ENST00000262605.9	6224	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	13.7181449183189	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGGTTCTTTTGTGATG	-11	True	NA	14	True	AATAAA	-18	NA	44475873	44494603	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_44475992_44479984_44480445_44484336_44484531_44486595_44486707_44489262
H1_mix_00055731	chr20	+	6248	6	FSM	ENSG00000124120.11	ENST00000372904.7	6234	6	-14	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	20.6842935581566	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGGTTCTTTTGTGATG	-11	True	NA	14	True	AATAAA	-18	NA	44475873	44494603	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_44475992_44478623_44478648_44479984_44480445_44484336_44484531_44486595_44486707_44489262
H1_mix_00055736	chr20	+	1771	5	FSM	ENSG00000168734.14	ENST00000372892.7	1338	5	5	-438	5	438	multi-exon	FALSE	canonical	3	117	junction_2	260.578682934733	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCACATCGGCCCGCCCA	16	False	NA	NA	False	NA	NA	NA	44531789	44619475	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_44531979_44582584_44582732_44589796_44589867_44614533_44614708_44618284
H1_mix_00055737	chr20	+	1438	6	FSM	ENSG00000168734.14	ENST00000372891.7	1443	6	5	0	5	0	multi-exon	FALSE	canonical	3	8	junction_2	291.470341544384	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTAAGATTATTTCTC	16	False	NA	23	True	AATAAA	-19	NA	44531789	44619037	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_44531979_44582584_44582732_44585099_44585205_44589796_44589867_44614533_44614708_44618284
H1_mix_00055744	chr20	+	4320	13	NIC	ENSG00000101104.13	novel	1910	14	NA	NA	2	0	intron_retention	FALSE	canonical	3	39	junction_7	14.1330483461833	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCCTCCCAGGAGGCCC	-15	True	NA	24	True	ATTAAA	-17	NA	44910061	44939316	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_44910337_44912659_44912854_44916755_44916872_44918905_44919046_44919182_44919278_44921593_44921732_44924160_44924257_44930517_44933186_44935390_44935498_44936636_44936731_44938060_44938192_44938673_44938749_44939125
H1_mix_00055745	chr20	+	2139	15	FSM	ENSG00000101104.13	ENST00000217073.7	2141	15	2	0	2	0	multi-exon	FALSE	canonical	3	9	junction_7	24.4536212417861	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCCTCCCAGGAGGCCC	-15	True	NA	24	True	ATTAAA	-17	NA	44910061	44939316	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_44910337_44912659_44912854_44916755_44916872_44918905_44919046_44919182_44919278_44921593_44921732_44924160_44924257_44930459_44930727_44932341_44932433_44933056_44933186_44935390_44935498_44936636_44936731_44938060_44938192_44938673_44938749_44939125
H1_mix_00055746	chr20	+	1910	14	FSM	ENSG00000101104.13	ENST00000537323.5	1910	14	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_8	19.8007829622255	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTTGCCTCCCAGGAGG	2	True	NA	21	True	ATTAAA	-14	NA	44910123	44939313	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_44910337_44912659_44912854_44916755_44916872_44918905_44919046_44919182_44919278_44921593_44921732_44924160_44924257_44930517_44930727_44933071_44933186_44935390_44935498_44936636_44936731_44938060_44938192_44938673_44938749_44939125
H1_mix_00055747	chr20	+	1999	15	NIC	ENSG00000101104.13	novel	1910	14	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_12	25.0570776998664	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTTGCCTCCCAGGAGG	11	False	NA	21	True	ATTAAA	-14	NA	44910132	44939313	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_44910337_44912659_44912854_44916755_44916872_44918905_44919046_44919182_44919278_44921593_44921732_44924160_44924257_44930517_44930727_44933056_44933186_44935390_44935498_44936636_44936731_44936893_44936977_44938060_44938192_44938673_44938749_44939125
H1_mix_00055748	chr20	+	2223	6	FSM	ENSG00000101104.13	ENST00000372824.5	2223	6	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	4.48998886412873	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTCCCAGGAGGCCCT	NA	False	NA	25	True	ATTAAA	-18	NA	44931561	44939317	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_44933186_44935390_44935498_44936636_44936731_44938060_44938192_44938673_44938749_44939125
H1_mix_00055755	chr20	+	1636	3	FSM	ENSG00000124233.12	ENST00000372781.4	1622	3	-16	2	-16	-2	multi-exon	FALSE	canonical	3	36	junction_1	2.5	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTTTTGACTCCTGT	40	False	NA	13	True	AATAAA	-18	NA	45207016	45209766	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45207130_45207373_45208731_45209600
H1_mix_00055756	chr20	+	347	3	FSM	ENSG00000124232.11	ENST00000622729.1	1661	3	410	904	410	-39	multi-exon	FALSE	canonical	1	2	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACGCGCACCAACTTCCA	9442	False	NA	NA	False	NA	NA	NA	45316334	45316920	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45316343_45316476_45316581_45316685
H1_mix_00055758	chr20	+	2917	4	FSM	ENSG00000204070.10	ENST00000426004.5	2915	4	-2	0	-2	0	multi-exon	TRUE	canonical	1	1	junction_3	56.1802654160891	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAGCCTCAGCAAGATTAA	-27	True	NA	NA	False	AATAAA	-25	NA	45363136	45376798	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45363316_45363528_45363694_45365618_45365687_45374293
H1_mix_00055759	chr20	+	1309	6	FSM	ENSG00000254806.5	ENST00000419593.5	1313	6	0	4	0	-4	multi-exon	FALSE	canonical	3	12	junction_3	195.944277793458	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTCGACTTCATTTTTC	36	True	NA	13	True	AATAAA	-18	NA	45363199	45410606	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45363316_45363528_45363694_45365618_45365687_45408459_45408607_45408800_45408939_45409931
H1_mix_00055760	chr20	+	2635	3	FSM	ENSG00000204070.10	ENST00000453003.1	433	3	12	-2214	12	4	multi-exon	FALSE	canonical	3	132	junction_1	8	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCAGCAGTGTGGGCTGA	-35	True	NA	29	True	AATAAA	-26	NA	45363465	45369213	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45363694_45365618_45365687_45366874
H1_mix_00055761	chr20	+	998	4	NNC	ENSG00000244274.9	novel	1132	3	NA	NA	-79	-7	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	215.041081346488	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCCAACCATTCGACTTCA	NA	False	NA	7	True	AATAAA	-12	NA	45405977	45410600	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_45406022_45408459_45408607_45408800_45408939_45409931
H1_mix_00055762	chr20	+	1114	4	FSM	ENSG00000244274.9	ENST00000372723.7	1118	4	0	4	0	-1	multi-exon	FALSE	canonical	3	71	junction_1	190.720272184742	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTCGACTTCATTTTTC	8	True	NA	13	True	AATAAA	-18	NA	45406056	45410606	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45406211_45408459_45408607_45408800_45408939_45409931
H1_mix_00055764	chr20	+	1203	4	FSM	ENSG00000244274.9	ENST00000372717.5	1207	4	0	4	0	-1	multi-exon	FALSE	canonical	3	18	junction_3	201.1737778362	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTCGACTTCATTTTTC	-17	True	NA	13	True	AATAAA	-18	NA	45406587	45410606	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45406733_45408459_45408607_45408800_45409037_45409931
H1_mix_00055765	chr20	+	1074	4	FSM	ENSG00000244274.9	ENST00000360981.8	1078	4	0	4	0	-1	multi-exon	FALSE	canonical	3	336	junction_1	68.9266921365656	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTCGACTTCATTTTTC	14	True	NA	13	True	AATAAA	-18	NA	45406618	45410606	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45406733_45408459_45408607_45408800_45408939_45409931
H1_mix_00055766	chr20	+	1533	4	FSM	ENSG00000244274.9	ENST00000372712.6	1537	4	0	4	0	-1	multi-exon	FALSE	canonical	3	19	junction_1	215.041081346488	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTCGACTTCATTTTTC	230	False	NA	13	True	AATAAA	-18	NA	45407206	45410606	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45407780_45408459_45408607_45408800_45408939_45409931
H1_mix_00055767	chr20	+	1485	3	FSM	ENSG00000244274.9	ENST00000443296.1	1233	3	-259	7	-259	-4	multi-exon	FALSE	canonical	3	18	junction_2	242.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACCATTCGACTTCATTT	30	False	NA	10	True	AATAAA	-15	NA	45408029	45410603	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45408607_45408800_45409037_45409931
H1_mix_00055768	chr20	+	1568	3	FSM	ENSG00000244274.9	ENST00000372710.5	1132	3	-437	1	-437	-1	multi-exon	FALSE	canonical	3	441	junction_2	31	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTCGACTTCATTTTTC	368	False	NA	13	True	AATAAA	-18	NA	45407851	45410606	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45408607_45408800_45408939_45409931
H1_mix_00055771	chr20	+	2388	13	FSM	ENSG00000124155.19	ENST00000638612.1	2311	13	-50	-27	-11	27	multi-exon	TRUE	canonical	2	5	junction_12	255.230614673606	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGTCTCAAAAAAAAAAAAAA	5543	False	NA	NA	False	NA	NA	NA	45416072	45430176	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45416344_45416516_45416695_45418851_45418980_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45427421_45427546_45429480
H1_mix_00055772	chr20	+	2037	11	FSM	ENSG00000124155.19	ENST00000543458.7	2037	11	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	207.512023748023	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCCTCTTGTCCTTGAG	5577	False	NA	30	True	AATAAA	-20	NA	45416106	45426244	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45416344_45416516_45416655_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
H1_mix_00055774	chr20	+	2039	11	FSM	ENSG00000124155.19	ENST00000639499.1	2021	11	-18	0	0	0	multi-exon	FALSE	canonical	3	652	junction_9	27.2257231308922	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCGTCTCTCTTTCTTTCCT	5593	False	NA	NA	False	NA	NA	NA	45416122	45425100	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45416344_45416516_45416695_45418851_45418980_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495
H1_mix_00055777	chr20	+	2003	11	FSM	ENSG00000124155.19	ENST00000638938.1	1985	11	-18	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	273.034503314142	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTCACTGTGTAGTGG	5593	False	NA	-35	True	NA	NA	NA	45416122	45426179	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45416344_45416516_45416695_45418771_45418980_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45424215_45424382_45424495_45424580_45425573
H1_mix_00055778	chr20	+	2229	12	FSM	ENSG00000124155.19	ENST00000640996.1	2219	12	-10	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	264.070676740242	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACTGTGTAGTGGATGGA	5593	False	NA	-30	True	NA	NA	NA	45416122	45426184	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45416344_45416516_45416695_45418771_45418980_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420507_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
H1_mix_00055780	chr20	+	1962	11	FSM	ENSG00000124155.19	ENST00000638671.1	1944	11	-18	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	207.080395016042	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGATGGAGTTTACTGTTT	5593	False	NA	-19	True	NA	NA	NA	45416122	45426195	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45416344_45418851_45418980_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
H1_mix_00055781	chr20	+	2211	12	FSM	ENSG00000124155.19	ENST00000640585.1	2203	12	-8	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	198.332636524461	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGGAGTTTACTGTTTG	5603	False	NA	-18	True	NA	NA	NA	45416132	45426196	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45416344_45416516_45416695_45418771_45418980_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
H1_mix_00055782	chr20	+	2176	12	FSM	ENSG00000124155.19	ENST00000639932.1	2158	12	-18	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	197.051111379428	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTTTACTGTTTGTGGA	5593	False	NA	-14	True	NA	NA	NA	45416122	45426200	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45416344_45416516_45416695_45418851_45418980_45419294_45419396_45419472_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
H1_mix_00055783	chr20	+	1975	11	FSM	ENSG00000124155.19	ENST00000372689.9	1971	11	-4	0	0	0	multi-exon	FALSE	canonical	3	23	junction_8	204.175145402177	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTTTGCCTCTTGTCCTT	5603	False	NA	27	True	AATAAA	-17	NA	45416132	45426241	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45416344_45416516_45416695_45418851_45418980_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45424215_45424382_45424495_45424580_45425573
H1_mix_00055784	chr20	+	2186	12	FSM	ENSG00000124155.19	ENST00000279036.12	2168	12	-18	0	0	0	multi-exon	FALSE	canonical	3	652	junction_9	29.4525813037592	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTTTGCCTCTTGTCCTT	5593	False	NA	27	True	AATAAA	-17	NA	45416122	45426241	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45416344_45416516_45416695_45418851_45418980_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
H1_mix_00055785	chr20	+	2006	3	FSM	ENSG00000124155.19	ENST00000638241.1	2006	3	0	0	0	0	multi-exon	FALSE	canonical	3	702	junction_1	17	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATAAAAACGGCTGTTTC	2507	False	NA	3	True	NA	NA	NA	45423103	45426217	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45424382_45424495_45424580_45425573
H1_mix_00055789	chr20	+	567	4	FSM	ENSG00000101443.18	ENST00000372676.8	567	4	0	0	0	0	multi-exon	TRUE	canonical	3	695	junction_1	63.7303346574891	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTCTGTCTCTGTCTCCCC	-1	True	NA	24	True	AATAAA	-17	NA	45469752	45481532	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45469861_45470388_45470533_45479941_45480095_45481370
H1_mix_00055790	chr20	+	423	3	FSM	ENSG00000101443.18	ENST00000339946.7	420	3	-3	0	0	0	multi-exon	FALSE	canonical	1	14	junction_1	377	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTCTGTCTCTGTCTCCCC	-1	True	NA	24	True	AATAAA	-17	NA	45469752	45481532	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45469861_45479941_45480095_45481370
H1_mix_00055795	chr20	+	782	5	FSM	ENSG00000175063.17	ENST00000405520.5	641	5	-143	2	-143	-1	multi-exon	FALSE	canonical	3	36	junction_3	1208.04291624925	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAAGTTGTTGCGTTGTA	NA	False	NA	27	True	AATAAA	-20	NA	45812432	45816951	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45812797_45813436_45813465_45814383_45814471_45815853_45815914_45816708
H1_mix_00055796	chr20	+	786	6	FSM	ENSG00000175063.17	ENST00000356455.9	777	6	-9	0	0	0	multi-exon	FALSE	canonical	3	2645	junction_1	113.26005474129	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAAGTTGTTGCGTTGTAA	-10	True	NA	28	True	AATAAA	-21	NA	45812634	45816952	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45812797_45813436_45813465_45814383_45814471_45815540_45815746_45815853_45815914_45816708
H1_mix_00055797	chr20	+	737	6	FSM	ENSG00000175063.17	ENST00000335046.7	737	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	1352.1620317107	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGCGTTGTAATTTCA	-10	True	NA	33	True	AATAAA	-26	NA	45812634	45816957	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45812797_45813436_45813465_45814383_45814471_45815389_45815541_45815853_45815914_45816708
H1_mix_00055798	chr20	+	665	5	FSM	ENSG00000175063.17	ENST00000352551.9	665	5	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	1179.19527644916	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGCGTTGTAATTTCA	1	True	NA	33	True	AATAAA	-26	NA	45812673	45816957	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45812797_45813436_45813465_45815540_45815746_45815853_45815914_45816708
H1_mix_00055801	chr20	+	3121	3	FSM	ENSG00000124104.19	ENST00000344780.4	3106	3	-15	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	30	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGGACTAGAACTGGGT	0	True	NA	NA	False	AATACA	-16	NA	45834135	45843275	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45834469_45834958_45835110_45840638
H1_mix_00055802	chr20	+	2794	3	FSM	ENSG00000124104.19	ENST00000372547.5	2794	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAAGCTTTTCTTCATTTG	402	False	NA	37	True	TATAAA	-32	NA	45834576	45842881	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45835117_45840447_45840459_45840638
H1_mix_00055806	chr20	+	3320	14	FSM	ENSG00000064601.21	ENST00000678988.2	3320	14	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_10	38.9921855317752	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGGACGGTGTGGGGG	70	False	NA	NA	False	NA	NA	NA	45890340	45898949	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45891380_45891568_45891763_45891915_45892028_45892272_45892324_45892397_45892485_45892724_45893312_45893987_45894073_45894649_45894742_45894822_45894902_45894993_45895134_45896964_45897041_45897716_45897807_45898004_45898110_45898366
H1_mix_00055807	chr20	+	1996	14	FSM	ENSG00000064601.21	ENST00000372459.7	1996	14	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_10	38.2424529430395	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTCTTCTCTGTGGCAC	10	False	NA	11	True	ATTAAA	-18	NA	45891385	45898820	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45891763_45891915_45892028_45892272_45892324_45892397_45892485_45892724_45892881_45893219_45893312_45893987_45894073_45894649_45894742_45894822_45894902_45894993_45895134_45896964_45897041_45897716_45897807_45898004_45898110_45898366
H1_mix_00055809	chr20	+	627	2	FSM	ENSG00000100982.12	ENST00000616084.1	627	2	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATGTTTAAGCCTGCCTT	39	False	NA	5	True	GATAAA	-21	NA	45934732	45937972	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45934805_45937417
H1_mix_00055810	chr20	+	1831	6	FSM	ENSG00000100982.12	ENST00000479348.2	1324	6	-507	0	-507	0	multi-exon	FALSE	canonical	3	276	junction_2	22.9085137012422	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGAGGGTCTTGAGGGC	39	False	NA	25	True	AATACA	-17	NA	45944499	45948023	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45945031_45945710_45945884_45946028_45946116_45946199_45946385_45947072_45947167_45947262
H1_mix_00055813	chr20	+	1951	9	FSM	ENSG00000101017.14	ENST00000372285.8	1682	9	-47	-222	-11	217	multi-exon	FALSE	canonical	3	101	junction_6	17.7301825991725	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCCTCTTTTACAGAGG	6	True	NA	NA	False	NA	NA	NA	46118266	46130080	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_46118395_46121819_46121899_46122232_46122359_46122609_46122757_46123125_46123220_46126639_46126702_46128137_46128225_46128329_46128359_46128881
H1_mix_00055816	chr20	+	4247	5	FSM	ENSG00000197496.6	ENST00000359271.4	4227	5	-20	0	-20	0	multi-exon	FALSE	canonical	3	65	junction_4	3.34477204006491	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTGTGCAACAAACATATC	-15	True	NA	29	True	AATAAA	-38	NA	46709628	46736347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_46709741_46725040_46726325_46726863_46726987_46729352_46729489_46733755
H1_mix_00055820	chr20	+	8996	39	FSM	ENSG00000124198.10	ENST00000679436.1	8828	39	-183	15	-4	0	multi-exon	FALSE	canonical	3	30	junction_7	20.965675681616	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCAGGTGGTACATCAAT	-15	True	NA	-26	True	ATTAAA	-14	NA	48921706	49036657	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_48922011_48941198_48941230_48941863_48941988_48951322_48951470_48952704_48952885_48953555_48953791_48963829_48963899_48965874_48966024_48969146_48969278_48971119_48971355_48972325_48972426_48973144_48973285_48974765_48974875_48976015_48976200_48984728_48984841_48985407_48985614_48988303_48988389_48988490_48988663_48989284_48989437_48989555_48989685_48991039_48991199_48994450_48994599_48995782_48995883_48998192_48998234_48998335_48998506_49005069_49005222_49010231_49010405_49011923_49012085_49013563_49013695_49013830_49013961_49016279_49016416_49017248_49017388_49017495_49017551_49018883_49018999_49023050_49023182_49025312_49025482_49028529_49028669_49032048_49032167_49033022
H1_mix_00055822	chr20	+	9855	38	FSM	ENSG00000124198.10	ENST00000681021.1	6583	38	-183	-3089	-4	0	multi-exon	FALSE	canonical	3	45	junction_7	19.5081223367955	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCAGGTGGTACATCAAT	-15	True	NA	-26	True	ATTAAA	-14	NA	48921706	49036657	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_48922011_48941198_48941230_48941863_48941988_48951322_48951470_48952704_48952885_48953555_48953791_48963829_48963899_48965871_48966024_48969146_48969278_48971119_48971355_48972325_48972426_48973144_48973285_48974765_48974875_48976015_48976200_48984728_48984841_48985407_48985614_48988303_48988389_48988490_48988663_48989284_48989437_48989555_48989685_48991039_48991199_48994450_48994599_48995782_48995883_48998192_48998234_48998335_48998506_49005069_49005222_49010231_49010405_49011923_49012085_49013563_49013695_49013830_49013961_49016279_49016416_49017248_49017388_49017495_49017551_49018883_49018999_49023050_49023182_49025312_49025482_49028529_49028669_49032048
H1_mix_00055823	chr20	+	5049	10	FSM	ENSG00000124198.10	ENST00000681119.1	5565	10	516	0	516	0	multi-exon	FALSE	canonical	3	54	junction_2	25.0988170494936	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAATAAAATTTTAAAAAGT	NA	False	NA	-11	True	ATTAAA	-29	NA	49013563	49036672	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_49013961_49016279_49016416_49017248_49017388_49017495_49017551_49018883_49018999_49023050_49023182_49025312_49025482_49028529_49028669_49032048_49032167_49033022
H1_mix_00055824	chr20	+	3570	25	FSM	ENSG00000124207.17	ENST00000262982.3	3550	25	-20	0	-20	0	multi-exon	FALSE	canonical	3	1698	junction_14	170.075550001561	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATCTTAAGGGCAGGTT	-28	True	NA	16	True	AATAAA	-22	NA	49046291	49096949	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_49046424_49058452_49058549_49063201_49063345_49066191_49066294_49066364_49066511_49067189_49067281_49068714_49068823_49070204_49070298_49072285_49072454_49072567_49072698_49074784_49074851_49075317_49075521_49076979_49077065_49078560_49078623_49084025_49084163_49085282_49085387_49088008_49088107_49089246_49089398_49089537_49089747_49090741_49090840_49090936_49091023_49092045_49092128_49094139_49094287_49094731_49094964_49096348
H1_mix_00055825	chr20	+	3413	24	FSM	ENSG00000124207.17	ENST00000396192.7	3459	24	46	0	-20	0	multi-exon	FALSE	canonical	3	4	junction_8	435.063504914086	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCAGGTTTTCAGTGCTCT	-28	True	NA	27	True	AATAAA	-33	NA	49046291	49096960	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_49046424_49058452_49058549_49063201_49063345_49066191_49066294_49066364_49066511_49067189_49067281_49068714_49068823_49070204_49070298_49072567_49072698_49074784_49074851_49075317_49075521_49076979_49077065_49078560_49078623_49084025_49084163_49085282_49085387_49088008_49088107_49089246_49089398_49089537_49089747_49090741_49090840_49090936_49091023_49092045_49092128_49094139_49094287_49094731_49094964_49096348
H1_mix_00055827	chr20	+	2570	21	FSM	ENSG00000124228.15	ENST00000618172.5	2570	21	0	0	0	0	multi-exon	FALSE	canonical	3	434	junction_12	53.041375359242	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATCCAAGTGTATATCTT	-7	True	NA	33	True	ATTAAA	-27	NA	49219415	49244073	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_49219542_49221451_49221599_49222956_49223017_49223267_49223434_49224944_49224992_49225112_49225200_49226429_49226536_49228714_49228889_49230198_49230350_49233305_49233406_49233567_49233710_49234934_49235089_49236149_49236232_49236332_49236511_49238948_49239056_49239235_49239339_49241892_49241988_49242082_49242207_49242593_49242682_49243628_49243704_49243815
H1_mix_00055831	chr20	+	946	4	FSM	ENSG00000177410.13	ENST00000441722.5	946	4	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_3	283.706812670326	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	1376	False	NA	21	True	AATAAA	-17	NA	49278177	49289260	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_49278717_49279103_49279209_49280484_49280571_49289044
H1_mix_00055832	chr20	+	860	3	FSM	ENSG00000177410.13	ENST00000417721.5	860	3	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_2	383.5	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	1376	False	NA	21	True	AATAAA	-17	NA	49278177	49289260	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_49278717_49279103_49279209_49289044
H1_mix_00055833	chr20	+	1075	6	FSM	ENSG00000177410.13	ENST00000450535.5	1075	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	415.599615014259	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	1376	False	NA	21	True	AATAAA	-17	NA	49278177	49289260	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_49278717_49279103_49279209_49280484_49280571_49280902_49280965_49281751_49281819_49289044
H1_mix_00055834	chr20	+	596	5	FSM	ENSG00000177410.13	ENST00000458653.5	596	5	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	278.309629729192	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	1469	False	NA	21	True	AATAAA	-17	NA	49278270	49289260	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_49278398_49279103_49279209_49280484_49280571_49280902_49280965_49289044
H1_mix_00055835	chr20	+	506	4	FSM	ENSG00000177410.13	ENST00000326677.9	504	4	-2	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	300.428952592049	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	-2	True	NA	21	True	AATAAA	-17	NA	49278639	49289260	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_49278739_49279103_49279209_49280484_49280571_49289044
H1_mix_00055836	chr20	+	568	5	FSM	ENSG00000177410.13	ENST00000428008.6	568	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	264.565091234652	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	-2	True	NA	21	True	AATAAA	-17	NA	49278639	49289260	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_49278739_49279103_49279209_49280484_49280571_49280902_49280965_49289044
H1_mix_00055838	chr20	+	6148	16	FSM	ENSG00000197818.12	ENST00000417961.5	6309	16	161	0	-20	0	multi-exon	TRUE	canonical	3	10	junction_6	12.6357517474119	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGTGTCTGTGTTCATG	3	True	NA	20	True	AATAAA	-20	NA	49812873	49892241	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_49812949_49815007_49815190_49823060_49823142_49839540_49839600_49845035_49845120_49849578_49849681_49850761_49850845_49855437_49855582_49862928_49863068_49864738_49864845_49874704_49874822_49877980_49878064_49880923_49881036_49883845_49884067_49886751_49886899_49887828
H1_mix_00055840	chr20	+	592	5	FSM	ENSG00000124226.11	ENST00000623528.3	624	5	32	0	-9	0	multi-exon	FALSE	canonical	2	4	junction_1	452.649077652877	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGCTATCTGTCTCATGT	NA	False	NA	-32	True	NA	NA	NA	49936367	49952152	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_49936553_49945381_49945489_49946135_49946251_49949247_49949356_49952075
H1_mix_00055841	chr20	+	2467	6	FSM	ENSG00000124226.11	ENST00000244061.6	2447	6	-20	0	0	0	multi-exon	FALSE	canonical	3	912	junction_2	74.0664566453668	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTAAGCTATGGTTCTTG	-15	True	NA	18	True	AATAAA	-19	NA	49936376	49953885	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_49936553_49941560_49941712_49945381_49945489_49946135_49946251_49949247_49949356_49952075
H1_mix_00055842	chr20	+	3848	4	FSM	ENSG00000124226.11	ENST00000624666.1	2006	4	-248	-1594	-248	9	multi-exon	FALSE	canonical	3	967	junction_2	60.4501631281688	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTTCTTGTTTTCATTC	6748	False	NA	27	True	AATAAA	-28	NA	49943682	49953894	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_49945489_49946135_49946251_49949247_49949356_49952075
H1_mix_00055843	chr20	+	1707	3	FSM	ENSG00000124216.4	ENST00000244050.3	1705	3	-2	0	-2	0	multi-exon	FALSE	canonical	3	37	junction_2	0.5	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTGGTGTCATAGAGGA	-2	True	NA	NA	False	AATAAA	-24	NA	49982977	49988886	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_49983142_49983823_49984352_49987871
H1_mix_00055844	chr20	+	771	3	FSM	ENSG00000231742.6	ENST00000411453.3	764	3	-12	5	-12	-1	multi-exon	FALSE	canonical	3	5	junction_1	2	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAACCTTTCCCTTCATTT	NA	False	NA	NA	False	AATAAA	-16	NA	50172503	50176671	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_50172789_50172922_50173018_50176280
H1_mix_00055845	chr20	+	1839	1	FSM	ENSG00000172216.6	ENST00000303004.5	1839	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	482	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCCTTTTGGGGGCAGT	-1	True	NA	24	True	AATAAA	-21	NA	50190829	50192668	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_50190800_50192700
H1_mix_00055846	chr20	+	4761	9	ISM	ENSG00000196396.10	ENST00000371621.5	3979	10	-32	481	30	0	intron_retention	FALSE	canonical	3	47	junction_8	10.7441844734721	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGGGTGCTTCCCATT	-21	True	NA	20	True	AATAAA	-21	NA	50510350	50584760	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_+_50510591_50561362_50561454_50564968_50565070_50568379_50568479_50574516_50574655_50578419_50578630_50579167_50579330_50579702_50579927_50581264
H1_mix_00055847	chr20	+	3992	10	FSM	ENSG00000196396.10	ENST00000371621.5	3979	10	-13	0	-13	0	multi-exon	FALSE	canonical	3	47	junction_8	10.9521969158681	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTTTTTTGACTTTTTG	-2	True	NA	NA	False	ATTAAA	-21	NA	50510369	50585241	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_50510591_50561362_50561454_50564968_50565070_50568379_50568479_50574516_50574655_50578419_50578630_50579167_50579330_50579702_50579927_50581264_50581461_50582691
H1_mix_00055849	chr20	+	1348	6	FSM	ENSG00000124243.19	ENST00000358791.9	1378	6	30	0	30	0	multi-exon	FALSE	canonical	1	4	junction_4	116.635500599089	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGGTCTGGTGTGAGAA	2	True	NA	16	True	AATAAA	-16	NA	50794923	50877177	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_50795174_50818210_50818283_50830278_50830381_50841765_50841901_50875996_50876094_50876485
H1_mix_00055850	chr20	+	1211	5	FSM	ENSG00000124243.19	ENST00000371608.8	1114	5	-97	0	-67	0	multi-exon	FALSE	canonical	3	221	junction_4	13.838352503098	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGGTCTGGTGTGAGAA	-1	True	NA	16	True	AATAAA	-16	NA	50794963	50877177	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_50795174_50818210_50818283_50830278_50830381_50841765_50841901_50876485
H1_mix_00055851	chr20	+	1076	4	FSM	ENSG00000124243.19	ENST00000445038.5	365	4	-106	-605	-67	0	multi-exon	FALSE	canonical	3	29	junction_3	103.428987984779	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGGTCTGGTGTGAGAA	-1	True	NA	16	True	AATAAA	-16	NA	50794963	50877177	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_50795174_50818210_50818283_50830278_50830381_50876485
H1_mix_00055856	chr20	+	622	1	FSM	ENSG00000185834.10	ENST00000432629.1	497	1	-85	-40	-85	40	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACACACACACACACACACA	3	True	NA	NA	False	AGTAAA	-16	NA	55074558	55075180	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_55074600_55075200
H1_mix_00055857	chr20	+	2987	3	FSM	ENSG00000124098.10	ENST00000371384.4	2987	3	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_2	4.5	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTGTTTCTCTAATTTA	-8	True	NA	NA	False	AATAAA	-22	NA	56358973	56368663	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_56359192_56365086_56365263_56366070
H1_mix_00055859	chr20	+	4138	6	FSM	ENSG00000101138.12	ENST00000217109.9	4032	6	-106	0	17	0	multi-exon	FALSE	canonical	3	278	junction_1	31.3878957561669	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTAGTTTATTTTTTTT	1	True	NA	10	True	AATAAA	-16	NA	56392538	56406362	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_56392714_56395520_56395722_56397206_56397485_56397643_56397842_56398966_56399358_56403467
H1_mix_00055861	chr20	+	1713	10	FSM	ENSG00000022277.13	ENST00000023939.8	1745	10	32	0	3	0	multi-exon	FALSE	canonical	3	9	junction_1	241.391081693147	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTTTTTATCTTTTC	NA	False	NA	33	True	AATAAA	-21	NA	56468616	56518886	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_56468767_56472325_56472416_56473300_56473396_56474677_56474772_56476984_56477125_56484110_56484190_56513314_56513429_56516934_56516990_56517105_56517202_56518086
H1_mix_00055864	chr20	+	2193	3	FSM	ENSG00000022277.13	ENST00000477573.1	2193	3	0	0	0	0	multi-exon	FALSE	canonical	3	542	junction_1	15.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTTTTTATCTTTTCT	NA	False	NA	34	True	AATAAA	-22	NA	56515693	56518887	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_56516990_56517105_56517202_56518086
H1_mix_00055866	chr20	+	2808	7	NNC	ENSG00000087510.7	novel	2862	7	NA	NA	522	0	at_least_one_novel_splicesite	TRUE	canonical	3	17	junction_1	10.1447851956888	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGCTATAGGTTTTTGT	7	True	NA	31	True	AATAAA	-24	NA	56630755	56639283	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_56630989_56631204_56631691_56631804_56631857_56633352_56633570_56634149_56634269_56636609_56636755_56637727
H1_mix_00055868	chr20	+	2387	12	FSM	ENSG00000101146.13	ENST00000395841.7	2385	12	-3	1	0	-1	multi-exon	FALSE	canonical	3	428	junction_9	44.4343698407043	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACCTGCACTCAGTGGTT	2	True	NA	21	True	AATAAA	-18	NA	57351251	57379201	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_57351423_57354031_57354129_57354711_57354817_57356445_57356539_57365355_57365443_57366806_57366894_57367007_57367080_57368704_57368813_57373474_57373582_57373662_57373739_57374606_57374802_57378012
H1_mix_00055870	chr20	+	2602	1	FSM	ENSG00000278709.2	ENST00000614771.2	2625	1	18	5	-9	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGATAGCTTGTATTTTTC	-1	True	NA	28	True	GATAAA	-39	NA	57710173	57712775	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_57710200_57712800
H1_mix_00055874	chr20	+	3583	2	FSM	ENSG00000124164.16	ENST00000476395.1	3583	2	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGTCATTTTGTCAC	NA	False	NA	27	True	AATAAA	-17	NA	58438976	58445552	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58441084_58444076
H1_mix_00055875	chr20	+	560	5	FSM	ENSG00000231290.6	ENST00000420279.5	555	5	-5	0	-5	0	multi-exon	FALSE	canonical	1	1	junction_2	5.5	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTCGGTTTCTGGATTG	-3	True	NA	NA	False	NA	NA	NA	58515493	58547822	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58515741_58519503_58519600_58523168_58523282_58523713_58523807_58547811
H1_mix_00055878	chr20	+	4552	8	FSM	ENSG00000124222.22	ENST00000371132.8	4552	8	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	73.1961301530877	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGGGTTCATGTTTTCTT	346	False	NA	42	True	ATTAAA	-32	NA	58651604	58679526	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58652088_58667489_58667598_58667986_58668128_58669290_58669454_58670511_58670604_58671153_58671298_58673630_58673712_58676186
H1_mix_00055882	chr20	+	2191	12	FSM	ENSG00000215440.12	ENST00000356091.11	2191	12	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_1	79.7725071222033	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCCTCGTTCTTCTTTC	-11	True	NA	22	True	ATTAAA	-22	NA	58692799	58715844	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58693051_58693736_58693923_58694421_58694593_58698683_58698774_58699196_58699279_58701015_58701159_58707122_58707201_58712478_58712580_58713419_58713544_58713916_58714094_58714559_58714671_58715167
H1_mix_00055883	chr20	+	2980	8	NNC	ENSG00000215440.12	novel	2191	12	NA	NA	45	-8413	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_7	234.490850959421	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAGTAAGAGGCTCAGT	34	True	NA	5	True	AATAAA	-16	NA	58692844	58705167	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_58693051_58693736_58693923_58694421_58694593_58698683_58698774_58699196_58699279_58701015_58701159_58702922_58703072_58703214
H1_mix_00055884	chr20	+	4684	7	FSM	ENSG00000215440.12	ENST00000529976.5	4684	7	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_6	74.4029942647173	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCCTCGTTCTTCTTTC	222	False	NA	22	True	ATTAAA	-22	NA	58693168	58715844	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58693923_58694421_58694593_58698683_58698774_58699196_58699279_58701015_58701159_58707122_58707201_58712478
H1_mix_00055885	chr20	+	4636	12	FSM	ENSG00000215440.12	ENST00000527587.5	4633	12	-10	7	0	0	multi-exon	FALSE	canonical	1	1	junction_10	206.92131294786	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCGAGTCCTTGCCTCA	222	False	NA	47	True	AGTAAA	-18	NA	58693168	58719231	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58693923_58694421_58694593_58698683_58698774_58699196_58699279_58701015_58701159_58707122_58707201_58712478_58712580_58713419_58714094_58714559_58714671_58715167_58716312_58717859_58717996_58718079
H1_mix_00055886	chr20	+	2061	3	FSM	ENSG00000215440.12	ENST00000527081.1	2061	3	0	0	0	0	multi-exon	FALSE	canonical	3	527	junction_2	4.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCCTCGTTCTTCTTTC	NA	False	NA	22	True	ATTAAA	-22	NA	58712820	58715844	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58714094_58714559_58714671_58715167
H1_mix_00055887	chr20	+	1315	4	ISM	ENSG00000215440.12	ENST00000356091.11	2191	12	20390	4	369	-4	3prime_fragment	FALSE	canonical	3	438	junction_1	44.2292010127045	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCACCTGGCCTCGTTCTTC	NA	False	NA	18	True	ATTAAA	-18	NA	58713189	58715840	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_+_58713544_58713916_58714094_58714559_58714671_58715167
H1_mix_00055892	chr20	+	1800	13	FSM	ENSG00000087460.29	ENST00000472183.6	1800	13	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	2047.0314414347	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	754	False	NA	19	True	AATAAA	-21	NA	58841484	58911192	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58841876_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
H1_mix_00055895	chr20	+	4029	13	FSM	ENSG00000087460.29	ENST00000371100.9	4027	13	-2	0	0	0	multi-exon	TRUE	canonical	3	91	junction_1	2059.00769486177	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	-6	True	NA	19	True	AATAAA	-21	NA	58852713	58911192	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58855334_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
H1_mix_00055896	chr20	+	3437	12	FSM	ENSG00000087460.29	ENST00000349036.9	3432	12	-5	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	2380.624076106	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	195	False	NA	19	True	AATAAA	-21	NA	58853260	58911192	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58855334_58895611_58895685_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
H1_mix_00055897	chr20	+	1585	13	FSM	ENSG00000087460.29	ENST00000467321.6	1563	13	-22	0	12	0	multi-exon	FALSE	canonical	3	36	junction_1	2071.0262686783	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	15	False	NA	19	True	AATAAA	-21	NA	58888870	58911192	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58889047_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
H1_mix_00055898	chr20	+	1663	13	FSM	ENSG00000087460.29	ENST00000477931.5	1663	13	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_1	1989.94511893893	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	244	False	NA	19	True	AATAAA	-21	NA	58889099	58911192	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58889354_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
H1_mix_00055899	chr20	+	1598	13	FSM	ENSG00000087460.29	ENST00000604005.6	1582	13	-16	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	2062.93642352352	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	9	False	NA	19	True	AATAAA	-21	NA	58889143	58911192	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58889333_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
H1_mix_00055900	chr20	+	1672	13	FSM	ENSG00000087460.29	ENST00000469431.6	1665	13	-7	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2078.91553593588	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	9	False	NA	19	True	AATAAA	-21	NA	58889143	58911192	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58889407_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
H1_mix_00055901	chr20	+	1534	12	FSM	ENSG00000087460.29	ENST00000480975.5	1534	12	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_1	2315.87701824522	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAGCAAAGAATGATGGG	-7	True	NA	6	True	AATAAA	-45	NA	58889170	58911179	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58889354_58895611_58895685_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
H1_mix_00055902	chr20	+	3962	12	FSM	ENSG00000087460.29	ENST00000371095.7	1931	12	-2075	44	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2079.39286673175	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGCATTAAAAAAAATCAAAA	49	False	NA	-25	True	AATAAA	-42	NA	58889226	58911148	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58891866_58895611_58895685_58903527_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
H1_mix_00055903	chr20	+	1866	12	FSM	ENSG00000087460.29	ENST00000265620.11	1866	12	0	0	0	0	multi-exon	FALSE	canonical	3	879	junction_2	1866.52844775562	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	12	False	NA	19	True	AATAAA	-21	NA	58891363	58911192	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58891866_58895611_58895685_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
H1_mix_00055904	chr20	+	1854	13	FSM	ENSG00000087460.29	ENST00000371085.8	1854	13	0	0	0	0	multi-exon	FALSE	canonical	3	3085	junction_1	1494.91812066748	1016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	4	True	NA	19	True	AATAAA	-21	NA	58891420	58911192	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58891866_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
H1_mix_00055905	chr20	+	1857	13	FSM	ENSG00000087460.29	ENST00000354359.12	1857	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	2094.15250691592	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	4	True	NA	19	True	AATAAA	-21	NA	58891420	58911192	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58891866_58895611_58895685_58898940_58898986_58903527_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
H1_mix_00055907	chr20	+	730	4	FSM	ENSG00000087460.29	ENST00000371081.5	730	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	1498.46061750792	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTATCTCGCGTCTGT	-2	True	NA	26	True	AATAAA	-23	NA	58891715	58900410	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58891866_58895611_58895685_58898940_58898986_58899948
H1_mix_00055908	chr20	+	1638	13	FSM	ENSG00000087460.29	ENST00000488652.6	1638	13	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	2061.1897639605	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	141	False	NA	19	True	AATAAA	-21	NA	58891980	58911192	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58892210_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
H1_mix_00055909	chr20	+	1537	12	FSM	ENSG00000087460.29	ENST00000476935.6	1537	12	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	2382.6763027395	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	197	False	NA	19	True	AATAAA	-21	NA	58892036	58911192	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58892210_58895611_58895685_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
H1_mix_00055910	chr20	+	3875	11	FSM	ENSG00000087460.29	ENST00000682829.1	3870	11	-5	0	0	0	multi-exon	FALSE	canonical	3	879	junction_1	1749.22648333485	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATGATGGGACTCCCG	927	False	NA	13	True	AATAAA	-15	NA	58893094	58911186	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58895685_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
H1_mix_00055911	chr20	+	3921	12	FSM	ENSG00000087460.29	ENST00000684284.1	3921	12	0	0	0	0	multi-exon	FALSE	canonical	3	3251	junction_2	1320.6022104885	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGATGGGACTCCCGT	927	False	NA	14	True	AATAAA	-16	NA	58893094	58911187	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
H1_mix_00055913	chr20	+	2837	11	FSM	ENSG00000087460.29	ENST00000496934.5	2837	11	0	0	0	0	multi-exon	FALSE	canonical	3	3251	junction_1	1066.1697847904	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	850	False	NA	19	True	AATAAA	-21	NA	58897439	58911192	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
H1_mix_00055914	chr20	+	5738	9	FSM	ENSG00000087460.29	ENST00000682590.1	5729	9	-9	0	0	0	multi-exon	FALSE	canonical	3	5965	junction_5	360.765852042568	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATGATGGGACTCCCG	4	False	NA	13	True	AATAAA	-15	NA	58902758	58911186	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58903586_58903671_58903792_58905382_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
H1_mix_00055915	chr20	+	3648	9	FSM	ENSG00000087460.29	ENST00000682411.1	3637	9	-11	0	0	0	multi-exon	FALSE	canonical	3	5965	junction_5	421.160821420986	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATGATGGGACTCCCG	4	False	NA	13	True	AATAAA	-15	NA	58902758	58911186	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58903586_58903671_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
H1_mix_00055916	chr20	+	2070	9	FSM	ENSG00000087460.29	ENST00000682917.1	2070	9	0	0	0	0	multi-exon	FALSE	canonical	3	5965	junction_5	399.578449744227	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATGATGGGACTCCCG	77	False	NA	13	True	AATAAA	-15	NA	58902831	58911186	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
H1_mix_00055917	chr20	+	1839	10	FSM	ENSG00000087460.29	ENST00000476196.5	1839	10	0	0	0	0	multi-exon	FALSE	canonical	3	5965	junction_6	402.534317224271	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGATGGGACTCCCGTGAG	226	False	NA	17	True	AATAAA	-19	NA	58902980	58911190	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
H1_mix_00055925	chr20	+	5097	4	FSM	ENSG00000196227.11	ENST00000360816.8	5086	4	-11	0	-11	0	multi-exon	FALSE	canonical	3	90	junction_3	14.7271480229163	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTGGTATTGTTTTGT	-51	True	NA	23	True	ATTAAA	-23	NA	59940377	59948680	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_59940536_59942197_59942310_59942426_59942513_59943939
H1_mix_00055926	chr20	+	880	4	FSM	ENSG00000196227.11	ENST00000469084.5	880	4	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_3	53.8908361618395	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGAAAGGCAGAGAGCTGT	30	True	NA	NA	False	AAAACA	-26	NA	59940458	59945000	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_59940536_59942197_59942310_59942426_59942513_59944395
H1_mix_00055937	chr20	+	590	2	FSM	ENSG00000101181.18	ENST00000488748.1	590	2	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTGGTTTTTTTGTATG	NA	False	NA	18	True	CATAAA	-19	NA	62202738	62203568	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_62202844_62203083
H1_mix_00055939	chr20	+	3946	14	FSM	ENSG00000130703.17	ENST00000313733.9	3944	14	-2	0	-2	0	multi-exon	FALSE	canonical	3	255	junction_6	23.0255839186089	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGAAAGTGATGGCCT	11	True	NA	7	True	AATAAA	-17	NA	62238518	62296183	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_62238598_62256056_62256222_62259980_62260126_62263615_62263692_62272124_62272260_62273308_62273407_62279156_62279340_62281057_62281166_62281789_62281880_62284045_62284170_62286582_62286712_62289206_62289331_62291702_62291794_62293784
H1_mix_00055943	chr20	+	1361	9	FSM	ENSG00000130706.13	ENST00000620230.4	1361	9	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_2	657.446373763671	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTTAGTTTCTTTGCCC	80	False	NA	20	True	AATAAA	-20	NA	62302895	62308860	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_62303050_62303567_62303782_62306196_62306321_62306647_62306735_62307370_62307453_62307595_62307829_62308020_62308179_62308367_62308471_62308654
H1_mix_00055944	chr20	+	1379	10	FSM	ENSG00000130706.13	ENST00000253003.7	1379	10	0	0	0	0	multi-exon	FALSE	canonical	3	1558	junction_6	220.954997931957	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAGTTTCTTTGCCCAA	7	True	NA	22	True	AATAAA	-22	NA	62302996	62308862	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_62303050_62303567_62303782_62304460_62304578_62306196_62306321_62306647_62306735_62307370_62307453_62307595_62307829_62308020_62308179_62308367_62308471_62308654
H1_mix_00055946	chr20	+	572	5	FSM	ENSG00000171858.18	ENST00000492356.2	429	5	-142	-1	-122	0	multi-exon	FALSE	canonical	3	5119	junction_1	806.252751933288	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCAGGTTCATTCTGT	NA	False	NA	14	True	AATAAA	-14	NA	62386980	62388520	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_62387137_62387320_62387389_62387610_62387675_62387842_62387915_62388308
H1_mix_00055955	chr20	+	2752	5	FSM	ENSG00000101189.7	ENST00000370487.5	2752	5	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_3	14.0445719051881	622	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGTAACATTTTGCTGC	-6	True	NA	3	True	AATAAA	-16	NA	62796472	62801729	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_62796672_62797109_62797232_62798586_62798669_62798974_62799050_62799455
H1_mix_00055959	chr20	+	2482	32	FSM	ENSG00000092758.18	ENST00000649368.1	2497	32	0	15	0	0	multi-exon	TRUE	canonical	3	182	junction_1	30.5875519626471	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCTCTCCCATACAAAG	4	True	NA	1	True	AATAAA	-17	NA	62817049	62841144	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_62817143_62817566_62817636_62818517_62818554_62819221_62819294_62819928_62819983_62821180_62821217_62821506_62821531_62821756_62821811_62822110_62822165_62822590_62822633_62824444_62824502_62824967_62825022_62825816_62825871_62826203_62826258_62826766_62826821_62827240_62827295_62827922_62827977_62828763_62828818_62828922_62828977_62829454_62829500_62829627_62829682_62829765_62829820_62830359_62830414_62830516_62830589_62832153_62832190_62833019_62833065_62835920_62835954_62836186_62836334_62836477_62836533_62837082_62837266_62838683_62838762_62840541
H1_mix_00055960	chr20	+	845	14	FSM	ENSG00000092758.18	ENST00000489045.5	838	14	-7	0	-7	0	multi-exon	FALSE	canonical	3	218	junction_9	17.0977004578612	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACGTGTGTCAGTGGACGG	-16	True	NA	NA	False	NA	NA	NA	62817435	62826820	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_62817636_62818517_62818554_62819221_62819294_62819928_62819983_62821180_62821217_62821506_62821531_62821756_62821811_62822110_62822165_62822590_62822633_62824444_62824502_62824967_62825022_62825816_62825871_62826203_62826258_62826766
H1_mix_00055961	chr20	+	2601	8	FSM	ENSG00000092758.18	ENST00000466192.5	2194	8	-407	0	-407	0	multi-exon	FALSE	canonical	3	275	junction_5	16.7148962037471	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCTCTCCCATACAAAG	NA	False	NA	1	True	AATAAA	-17	NA	62830732	62841144	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_62832190_62833019_62833065_62835920_62835954_62836186_62836334_62836477_62836533_62837082_62837266_62838683_62838762_62840541
H1_mix_00055963	chr20	+	978	4	FSM	ENSG00000092758.18	ENST00000467819.5	993	4	0	15	0	0	multi-exon	FALSE	canonical	3	275	junction_1	20.2703943940144	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCTCTCCCATACAAAG	24	False	NA	1	True	AATAAA	-17	NA	62836418	62841144	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_62836533_62837082_62837266_62838683_62838762_62840541
H1_mix_00055965	chr20	+	4467	5	FSM	ENSG00000101193.8	ENST00000266069.5	4369	5	-98	0	-98	0	multi-exon	FALSE	canonical	3	258	junction_1	22.4874965258474	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTATCTGGAAGCTCTCT	11	True	NA	17	True	AGTAAA	-23	NA	62938048	62948475	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_62938254_62941490_62941621_62942986_62943184_62943494_62943693_62944738
H1_mix_00055966	chr20	+	3519	13	FSM	ENSG00000101194.18	ENST00000370351.9	3518	13	-2	1	0	-1	multi-exon	FALSE	canonical	3	65	junction_5	38.9902943763644	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATGTTTTGTGTATCTG	-3	True	NA	5	True	AATAAA	-15	NA	62952706	62969584	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_62952890_62956764_62956963_62957440_62957581_62960503_62960604_62962623_62962755_62963272_62963370_62963583_62963681_62964227_62964316_62965131_62965167_62965609_62965726_62966524_62966581_62966702_62966733_62967336
H1_mix_00055967	chr20	+	2594	14	FSM	ENSG00000101194.18	ENST00000370349.7	2594	14	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	59.8169792443346	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGTTATTTTATTTAACA	-3	True	NA	18	True	ATTAAA	-15	NA	62952706	62968597	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_62952890_62953210_62953273_62956764_62956963_62957440_62957581_62960503_62960604_62962623_62962755_62963272_62963370_62963583_62963681_62964227_62964316_62965131_62965167_62965609_62965726_62966524_62966581_62966702_62966733_62967336
H1_mix_00055968	chr20	+	2900	11	NIC	ENSG00000101194.18	novel	2594	14	NA	NA	14	0	intron_retention	FALSE	canonical	1	4	junction_1	68.8927427237441	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGTTATTTTATTTAACA	15	True	NA	18	True	ATTAAA	-15	NA	62952724	62968597	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_62952890_62957440_62957581_62960503_62960604_62962623_62962735_62963272_62963370_62963583_62963681_62964227_62964316_62965131_62965167_62965609_62965726_62966524_62966581_62966702
H1_mix_00055970	chr20	+	909	7	FSM	ENSG00000101197.13	ENST00000217169.8	1334	7	425	0	425	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCAGCCTGTTCCAGAC	266	False	NA	NA	False	AATAAA	-21	NA	63236329	63240495	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63236446_63237902_63238003_63238395_63238478_63238568_63238615_63239161_63239234_63239357_63239611_63240255
H1_mix_00055972	chr20	+	1510	9	FSM	ENSG00000101199.13	ENST00000519531.5	1490	9	-20	0	-2	0	multi-exon	FALSE	canonical	3	299	junction_5	53.504526677656	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATCCGTCACCCCCGTGG	-6	True	NA	NA	False	NA	NA	NA	63272808	63283528	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63272921_63275576_63275641_63276090_63276201_63276479_63276652_63277204_63277306_63278116_63278204_63278898_63278996_63281290_63281348_63282818
H1_mix_00055974	chr20	+	4422	4	FSM	ENSG00000101199.13	ENST00000518794.6	2727	4	-2848	1153	-2848	0	multi-exon	FALSE	canonical	3	303	junction_2	31.0304509939654	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGCGGCCAGTTCACTAC	7982	False	NA	NA	False	NA	NA	NA	63281266	63288192	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63284923_63285653_63285714_63286365_63286443_63287563
H1_mix_00055975	chr20	+	1162	2	FSM	ENSG00000101199.13	ENST00000518691.1	1162	2	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGGCCTGCCTAACCTCT	52	False	NA	NA	False	NA	NA	NA	63284434	63286327	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63284923_63285653
H1_mix_00055976	chr20	+	2697	3	FSM	ENSG00000101199.13	ENST00000395285.3	2697	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	151	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAATGTCTGGATGCATCC	1407	False	NA	29	True	AATAAA	-16	NA	63285789	63289788	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63286443_63287563_63289497_63289677
H1_mix_00055980	chr20	+	871	4	FSM	ENSG00000125534.10	ENST00000370179.8	827	4	-312	268	-312	0	multi-exon	FALSE	canonical	3	1141	junction_1	65.335033991471	315	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCCCCTCTCCCCACTCCG	185	False	NA	NA	False	NA	NA	NA	63520452	63521938	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63520895_63521283_63521364_63521511_63521590_63521667
H1_mix_00055981	chr20	+	2956	1	FSM	ENSG00000125531.7	ENST00000615526.1	2954	1	25	-27	25	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGTTTTAAAGGCAGCA	708	False	NA	30	True	AATAAA	-43	NA	63553739	63556695	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63553700_63556700
H1_mix_00055982	chr20	+	605	2	FSM	ENSG00000232442.2	ENST00000411579.2	614	2	6	3	0	0	multi-exon	TRUE	canonical	1	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGTGCTACTATTTTAT	-9	True	NA	11	True	AATAAA	-18	NA	63627226	63628707	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63627393_63628268
H1_mix_00055985	chr20	+	4535	35	FSM	ENSG00000258366.11	ENST00000508582.7	4517	35	-18	0	0	0	multi-exon	TRUE	canonical	1	1	junction_4	35.9883799970169	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACGGTGTCTTCGTGGCCT	-27	True	NA	18	True	AATAAA	-18	NA	63658293	63696245	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63658467_63659232_63659505_63661297_63661497_63661849_63661944_63662473_63662628_63662828_63662890_63666003_63666080_63667468_63667554_63672555_63672622_63673939_63674094_63678144_63678184_63678267_63678347_63679848_63679947_63680663_63680720_63685522_63685598_63685790_63685873_63687637_63687771_63687936_63688051_63688138_63688180_63688300_63688387_63688527_63688606_63689054_63689133_63689501_63689649_63689749_63689866_63690086_63690211_63690293_63690442_63690804_63690948_63691741_63691838_63692804_63693004_63693142_63693284_63694371_63694489_63694740_63694975_63695065_63695222_63695327_63695481_63695777
H1_mix_00055988	chr20	+	5746	20	FSM	ENSG00000026036.22	ENST00000480273.5	5751	20	0	5	0	-1	multi-exon	FALSE	canonical	1	18	junction_18	49.8429667018315	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACTGGTTGTAGTTGCA	NA	False	NA	52	True	TATAAA	-10	NA	63686370	63698679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63688051_63688138_63688180_63688300_63688387_63688527_63688606_63689054_63689133_63689501_63689649_63689749_63689866_63690086_63690211_63690293_63690442_63690804_63690948_63691741_63691838_63692804_63693004_63693142_63693284_63694371_63694489_63694740_63694975_63695065_63695222_63695327_63695481_63695777_63697192_63697327_63697523_63698279
H1_mix_00055990	chr20	+	2273	11	FSM	ENSG00000258366.11	ENST00000370003.2	2273	11	0	0	0	0	multi-exon	FALSE	canonical	1	60	junction_8	36.3016528549321	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGTGTCTTCGTGGCCTGGG	NA	False	NA	21	True	AATAAA	-21	NA	63689965	63696248	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63690211_63690293_63690442_63690804_63690948_63691741_63691838_63692804_63693004_63693142_63693284_63694371_63694489_63694740_63694975_63695065_63695222_63695327_63695651_63695777
H1_mix_00055991	chr20	+	2831	6	FSM	ENSG00000197114.12	ENST00000477340.5	2831	6	0	0	0	0	multi-exon	TRUE	canonical	3	109	junction_1	48.8114740609214	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTGGAGATCAGCTGG	-14	True	NA	13	True	ATTAAA	-20	NA	63708038	63736141	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63708119_63708552_63709165_63733218_63733353_63733586_63734825_63735158_63735565_63735780
H1_mix_00055997	chr20	+	541	2	FSM	ENSG00000125520.14	ENST00000482718.1	541	2	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCCCGCCCCTGCCCCCG	518	False	NA	NA	False	NA	NA	NA	63741921	63742535	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63742057_63742129
H1_mix_00055999	chr20	+	2310	7	FSM	ENSG00000101150.18	ENST00000346249.9	2310	7	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_4	155.676659208188	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCGCCTCGGCTTGTGTGA	-8	True	NA	30	True	AATAAA	-19	NA	63865269	63891538	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63865385_63869295_63869442_63873667_63873817_63875815_63875876_63882718_63882821_63889189_63889239_63889849
H1_mix_00056000	chr20	+	2440	6	FSM	ENSG00000101150.18	ENST00000348257.9	2237	6	-210	7	-148	0	multi-exon	FALSE	canonical	3	360	junction_3	128.799689440619	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCGCCTCGGCTTGTGTGA	NA	False	NA	30	True	AATAAA	-19	NA	63865079	63891538	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63865385_63869295_63869442_63873667_63873817_63882718_63882821_63889189_63889239_63889849
H1_mix_00056001	chr20	+	4053	2	FSM	ENSG00000101150.18	ENST00000474176.2	4053	2	0	0	0	0	multi-exon	FALSE	canonical	3	721	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCTTGTGTGATGTATCG	NA	False	NA	37	True	AATAAA	-26	NA	63886881	63891545	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63889239_63889849
H1_mix_00056002	chr20	+	5300	5	FSM	ENSG00000101152.11	ENST00000360864.9	5249	5	-51	0	-51	0	multi-exon	FALSE	canonical	3	48	junction_4	24.4374200765956	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCACTGCGGACCCCA	NA	False	NA	16	True	AATAAA	-21	NA	63895074	63936011	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63895324_63928334_63928453_63929311_63929526_63930850_63931023_63931464
H1_mix_00056004	chr20	+	5287	6	FSM	ENSG00000101152.11	ENST00000470551.1	5287	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	29.178073959739	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTATGTCTTACTCGCTAGT	31	True	NA	36	True	AATAAA	-41	NA	63895181	63936031	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63895324_63928334_63928453_63929311_63929526_63930850_63931023_63931108_63931183_63931464
H1_mix_00056006	chr20	+	894	4	FSM	ENSG00000196421.9	ENST00000636176.2	954	4	60	0	60	0	multi-exon	FALSE	canonical	2	3	junction_1	3.74165738677394	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTTCGCCTGCCTCTCT	1	True	NA	12	True	AATAAA	-26	NA	64036241	64039001	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_64036327_64037926_64038203_64038295_64038449_64038621
H1_mix_00056007	chr20	+	421	2	FSM	ENSG00000171703.17	ENST00000476113.1	421	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGACTTAGCCCGCAGC	25	True	NA	23	True	AATAAA	-17	NA	64063195	64064123	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_64063385_64063891
H1_mix_00056008	chr20	+	1184	10	FSM	ENSG00000171703.17	ENST00000343484.10	1182	10	-2	0	0	0	multi-exon	FALSE	canonical	2	277	junction_6	77.7109236486158	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTCTCCTCAGCCGTT	25	True	NA	26	True	ATTAAA	-16	NA	64063195	64072347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_64063385_64066475_64066539_64066914_64067021_64068046_64068135_64069360_64069492_64069764_64069822_64070259_64070415_64070488_64070636_64071869_64071942_64072171
H1_mix_00056009	chr20	+	2357	8	FSM	ENSG00000171703.17	ENST00000465111.5	2357	8	0	0	0	0	multi-exon	FALSE	canonical	3	457	junction_4	35.3426377173001	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTGTTCTCCTCAGCCG	2020	False	NA	24	True	ATTAAA	-14	NA	64065549	64072345	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_64066539_64066914_64067021_64068046_64068135_64069360_64069492_64069764_64070415_64070488_64070636_64071869_64071942_64072171
H1_mix_00056013	chr20	+	491	2	FSM	ENSG00000203880.12	ENST00000610196.1	476	2	-15	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCATGGTGGGCCTCATT	-16	True	NA	NA	False	NA	NA	NA	64255740	64260248	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_64255925_64259941
H1_mix_00056014	chr20	+	3866	6	FSM	ENSG00000203880.12	ENST00000308824.11	3859	6	-7	0	0	0	multi-exon	FALSE	canonical	3	471	junction_4	47.4442831118777	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGGAGAAGTGGCTGGC	-16	True	NA	17	True	AATAAA	-18	NA	64255740	64276226	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_64255871_64259941_64260273_64264428_64264532_64265257_64265430_64267886_64268011_64273220
H1_mix_00056016	chr20	-	1421	9	FSM	ENSG00000196476.12	ENST00000382369.9	1420	9	0	-1	0	1	multi-exon	FALSE	canonical	3	60	junction_8	45.912961132996	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGCCAGTGTCTCGGGG	-22	True	NA	-13	True	AATAAA	-19	NA	290429	270861	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_271268_275967_276087_276792_276880_277043_277146_277225_277384_278329_278430_279171_279331_283962_284082_290258
H1_mix_00056017	chr20	-	1565	10	ISM	ENSG00000196476.12	ENST00000360321.7	1576	11	292	2	-29	-2	3prime_fragment	FALSE	canonical	3	97	junction_8	36.6090456338624	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTTGCCAGTGTCTCG	-2	True	NA	-16	True	AATAAA	-16	NA	290458	270864	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_-_271268_275967_276087_276792_276880_277043_277146_277225_277384_278329_278430_279171_279331_283962_284082_289558_289677_290258
H1_mix_00056018	chr20	-	1574	11	FSM	ENSG00000196476.12	ENST00000360321.7	1576	11	0	2	0	-2	multi-exon	FALSE	canonical	3	15	junction_10	56.7645135626123	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTTGCCAGTGTCTCG	-7	True	NA	-16	True	AATAAA	-16	NA	290750	270864	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_271268_275967_276087_276792_276880_277043_277146_277225_277384_278329_278430_279171_279331_283962_284082_289558_289677_290258_290308_290590
H1_mix_00056019	chr20	-	1192	7	NNC	ENSG00000196476.12	novel	1420	9	NA	NA	11596	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	72.206686363214	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTTGCCAGTGTCTCG	564	False	NA	-16	True	AATAAA	-16	NA	278833	270864	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_271268_275967_276087_276792_276880_277043_277146_277225_277384_278329_278430_278610
H1_mix_00056021	chr20	-	1398	3	FSM	ENSG00000225377.6	ENST00000414676.6	1411	3	13	0	13	0	multi-exon	FALSE	canonical	2	11	junction_1	2.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATGGTGTTTGTGTTTGT	9	True	NA	-3	True	NA	NA	NA	325256	319686	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_320782_322377_322566_325141
H1_mix_00056022	chr20	-	7515	2	FSM	ENSG00000125875.15	ENST00000681193.1	7493	2	0	-22	0	3	multi-exon	FALSE	canonical	3	165	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGAGTTCTGTGAGCCA	NA	False	NA	-6	True	AATAAA	-17	NA	443257	435476	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_438842_439107
H1_mix_00056023	chr20	-	4432	8	FSM	ENSG00000125875.15	ENST00000354200.5	4446	8	17	-3	0	3	multi-exon	FALSE	canonical	3	147	junction_7	12.0169947684646	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGAGTTCTGTGAGCCA	8	True	NA	-6	True	AATAAA	-17	NA	462516	435476	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_438842_439107_439296_440247_440390_441587_441690_441856_442044_445049_445131_447888_448075_462335
H1_mix_00056025	chr20	-	3579	8	NIC	ENSG00000125875.15	novel	4095	9	NA	NA	0	0	intron_retention	FALSE	canonical	2	4	junction_3	55.9919819332762	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTCTTCTGTCATTCCG	-17	True	NA	-4	True	AATAAA	-21	NA	462541	436282	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_438842_439107_439296_440247_440318_441587_441690_441856_442044_445049_445131_447888_448075_462335
H1_mix_00056026	chr20	-	2832	14	FSM	ENSG00000101266.19	ENST00000643660.1	2822	14	0	-10	0	0	multi-exon	FALSE	canonical	3	25	junction_1	201.651318958914	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTGTCTGAGTACTCC	11	True	NA	-1	True	NA	NA	NA	543732	472497	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_473951_483927_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499832_499935_505117_505230_508450_508661_543671
H1_mix_00056027	chr20	-	12984	14	FSM	ENSG00000101266.19	ENST00000217244.9	12984	14	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_13	262.161858851905	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTGTCTGAGTACTCC	-6	True	NA	-1	True	NA	NA	NA	543790	472497	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499832_499935_505117_505230_508450_508661_527932_528050_543671
H1_mix_00056028	chr20	-	12905	13	FSM	ENSG00000101266.19	ENST00000646561.1	12912	13	7	0	7	0	multi-exon	FALSE	canonical	3	655	junction_12	51.9917194261633	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTGTCTGAGTACTCC	NA	False	NA	-1	True	NA	NA	NA	543828	472497	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499832_499935_505117_505230_508450_508661_543671
H1_mix_00056029	chr20	-	909	4	FSM	ENSG00000101266.19	ENST00000619801.5	909	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	362.269083539969	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGCCTGACAGAGACTGAG	NA	False	NA	NA	False	NA	NA	NA	488736	473336	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_473951_486375_486463_487426_487576_488677
H1_mix_00056031	chr20	-	4047	12	FSM	ENSG00000101266.19	ENST00000349736.10	4047	12	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_11	215.724495250863	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTCCCTGCAGCCTGAG	-8	True	NA	-39	True	AATAAA	-17	NA	543792	481109	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499832_499935_505117_505230_543671
H1_mix_00056034	chr20	-	1006	2	FSM	ENSG00000125878.7	ENST00000246080.4	1006	2	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	0	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTCGTTCTGAGCTGAGG	-1	True	NA	-22	True	AATAAA	-19	NA	610309	604256	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_604666_609712
H1_mix_00056035	chr20	-	2528	2	FSM	ENSG00000271303.2	ENST00000381962.4	2528	2	0	0	0	0	multi-exon	FALSE	canonical	3	435	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGGGTGTGCAATTCCTT	-2	True	NA	-1	True	AATAAA	-26	NA	653200	646614	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_648918_652975
H1_mix_00056036	chr20	-	3055	4	FSM	ENSG00000101276.18	ENST00000381944.5	3206	4	151	0	18	0	multi-exon	FALSE	canonical	3	26	junction_3	1.69967317119759	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCAGATCTTCCTTCAAA	10	True	NA	-7	True	AATAAA	-18	NA	768482	760079	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_761825_763497_764004_765207_765826_768296
H1_mix_00056037	chr20	-	3102	5	FSM	ENSG00000101276.18	ENST00000488495.3	3106	5	18	-14	18	0	multi-exon	FALSE	canonical	3	15	junction_4	7.94905654779232	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCAGATCTTCCTTCAAA	10	True	NA	-7	True	AATAAA	-18	NA	768482	760079	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_761239_761700_761825_763497_764004_765207_766335_768296
H1_mix_00056038	chr20	-	2626	6	FSM	ENSG00000101276.18	ENST00000217254.11	2654	6	30	-2	0	2	multi-exon	FALSE	canonical	3	22	junction_5	5.00399840127872	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGATCTTCCTTCAAAGG	-3	True	NA	-5	True	AATAAA	-20	NA	775985	760077	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_761239_761700_761825_763497_764004_765207_765826_768296_768483_775954
H1_mix_00056039	chr20	-	2674	3	FSM	ENSG00000101276.18	ENST00000675066.1	2674	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCCGGTGCCAGAGTCCA	7558	False	NA	NA	False	NA	NA	NA	768424	762075	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_764004_765207_765826_768296
H1_mix_00056041	chr20	-	219	1	FSM	ENSG00000101278.6	ENST00000492704.1	531	1	34	278	34	-278	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCCCAGAGATTGTTCCT	7072	False	NA	NA	False	NA	NA	NA	839943	839724	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_839700_839900
H1_mix_00056042	chr20	-	3027	5	FSM	ENSG00000101282.9	ENST00000217260.9	2757	5	-270	0	-270	0	multi-exon	FALSE	canonical	3	12	junction_1	10.0249688278817	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTCTTGAGCATCAAGAG	NA	False	NA	-5	True	AATAAA	-20	NA	1002581	958451	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_960467_963934_964121_967173_967315_967949_968139_1002085
H1_mix_00056043	chr20	-	2725	4	FSM	ENSG00000101282.9	ENST00000400634.2	722	4	-201	-1802	-154	0	multi-exon	FALSE	canonical	3	26	junction_1	4.49691252107735	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTCTTGAGCATCAAGAG	NA	False	NA	-5	True	AATAAA	-20	NA	1002465	958451	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_960467_967173_967315_967949_968139_1002085
H1_mix_00056044	chr20	-	1725	2	FSM	ENSG00000125895.6	ENST00000381894.3	1730	2	0	5	0	4	multi-exon	FALSE	canonical	3	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGGATGAGGTTTCTTG	1439	False	NA	-4	True	AATACA	-22	NA	1184473	1180565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_1181588_1183770
H1_mix_00056045	chr20	-	1261	5	FSM	ENSG00000125775.15	ENST00000381808.7	1261	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	4.60298815988049	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGTCCGCAAAGGTAATT	18	False	NA	NA	False	AATAAA	-20	NA	1313639	1309974	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_1310496_1310799_1310892_1312336_1312509_1312586_1312763_1313339
H1_mix_00056046	chr20	-	417	5	FSM	ENSG00000274322.1	ENST00000618770.1	1164	5	0	747	0	55	multi-exon	FALSE	canonical	2	5	junction_2	1142.54614239426	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTATTTGGCTTCTGCC	20	True	NA	NA	False	NA	NA	NA	1393086	1318317	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_1318419_1319589_1319660_1320362_1320436_1392833_1392882_1392961
H1_mix_00056047	chr20	-	1582	4	FSM	ENSG00000088832.18	ENST00000677937.1	1579	4	0	-3	0	3	multi-exon	FALSE	canonical	3	3121	junction_1	127.917508140555	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCATGGTGGTTATTTT	-5	True	NA	-6	True	AATAAA	-29	NA	1393038	1368973	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_1370073_1372075_1372241_1375490_1375604_1392833
H1_mix_00056048	chr20	-	1518	5	FSM	ENSG00000088832.18	ENST00000400137.9	1514	5	0	-4	0	3	multi-exon	FALSE	canonical	3	2658	junction_4	275.022726333661	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCATGGTGGTTATTTT	1	True	NA	-6	True	AATAAA	-29	NA	1393054	1368973	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_1370073_1372075_1372241_1375490_1375604_1392833_1392882_1392961
H1_mix_00056049	chr20	-	1456	4	FSM	ENSG00000088832.18	ENST00000618612.5	1452	4	0	-4	0	3	multi-exon	FALSE	canonical	3	206	junction_2	1279.05772608849	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCATGGTGGTTATTTT	1	True	NA	-6	True	AATAAA	-29	NA	1393105	1368973	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_1370073_1372075_1372241_1392833_1392882_1392961
H1_mix_00056050	chr20	-	1524	4	FSM	ENSG00000088832.18	ENST00000439640.5	1520	4	0	-4	0	3	multi-exon	FALSE	canonical	3	22	junction_3	1535.41315467712	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCATGGTGGTTATTTT	-2	True	NA	-6	True	AATAAA	-29	NA	1393108	1368973	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_1370073_1372075_1372241_1375490_1375604_1392961
H1_mix_00056051	chr20	-	3579	4	FSM	ENSG00000088832.18	ENST00000381719.8	3564	4	0	-15	0	0	multi-exon	FALSE	canonical	3	2658	junction_3	317.058354250444	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCAGCTCTGTGTCATG	-17	True	NA	-17	True	AATAAA	-18	NA	1393123	1368984	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_1372241_1375490_1375604_1392833_1392882_1392961
H1_mix_00056055	chr20	-	2725	9	FSM	ENSG00000088833.18	ENST00000216879.9	2721	9	0	-4	0	0	multi-exon	FALSE	canonical	3	786	junction_6	98.8316118456033	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTACTTTCTAATGGG	-10	True	NA	0	True	ATTAAA	-22	NA	1466849	1442161	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_1443912_1445665_1445831_1452492_1452631_1453030_1453141_1454212_1454306_1454966_1455133_1458199_1458275_1464328_1464427_1466719
H1_mix_00056056	chr20	-	1446	9	FSM	ENSG00000088833.18	ENST00000381653.9	1446	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	350.244535110828	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCCTCCCTCCTGTGT	15	True	NA	NA	False	NA	NA	NA	1466824	1443734	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_1443912_1445665_1446150_1452492_1452631_1453030_1453141_1454212_1454306_1454966_1455133_1458199_1458275_1464328_1464427_1466719
H1_mix_00056057	chr20	-	863	7	FSM	ENSG00000088833.18	ENST00000555568.5	863	7	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_6	355.744485394909	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCTTGCATTGTGTGGCC	4	True	NA	NA	False	NA	NA	NA	1466835	1445665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_1445831_1452492_1452631_1453030_1453141_1454212_1454306_1454966_1455133_1458199_1458275_1466719
H1_mix_00056059	chr20	-	554	2	FSM	ENSG00000286288.1	ENST00000655119.1	1224	2	182	488	93	1	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTGCTGAAAATAATGC	7	True	NA	NA	False	AATAAA	-28	NA	1810674	1806366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_1806800_1810553
H1_mix_00056060	chr20	-	1008	7	FSM	ENSG00000125835.20	ENST00000438552.6	1008	7	0	0	0	0	multi-exon	FALSE	canonical	3	1756	junction_1	1201.42869812015	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGGATCTTTATTTTTA	NA	False	NA	NA	False	AATAAA	-26	NA	2470853	2461633	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_2461794_2462635_2462762_2463088_2463228_2463746_2463900_2465707_2465820_2467606_2467759_2470687
H1_mix_00056061	chr20	-	1082	7	FSM	ENSG00000125835.20	ENST00000381342.7	1082	7	0	0	0	0	multi-exon	FALSE	canonical	3	3152	junction_1	710.912422329377	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGCACCTATGGATCTT	-10	True	NA	NA	False	AATAAA	-18	NA	2470789	2461641	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_2461940_2462635_2462762_2463088_2463228_2463746_2463900_2465707_2465820_2467606_2467759_2470687
H1_mix_00056062	chr20	-	985	8	FSM	ENSG00000125835.20	ENST00000474384.2	985	8	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_6	2220.23251218499	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTCTTAAGAGAACATTATA	88	False	NA	NA	False	NA	NA	NA	2470732	2461659	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_2461794_2462635_2462762_2463088_2463228_2463746_2463900_2465707_2465820_2467191_2467316_2467606_2467759_2470687
H1_mix_00056063	chr20	-	2974	2	FSM	ENSG00000088876.13	ENST00000465019.1	3172	2	205	-7	205	7	multi-exon	FALSE	canonical	3	19	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTTTATTTTCATATAC	NA	False	NA	NA	False	AATAAA	-38	NA	2492825	2481809	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_2484657_2492698
H1_mix_00056064	chr20	-	3612	7	NIC	ENSG00000088876.13	novel	3675	8	NA	NA	0	7	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	9.68962790249909	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTTTATTTTCATATAC	15	True	NA	NA	False	AATAAA	-38	NA	2508901	2481809	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_2484657_2486640_2486764_2492698_2492826_2493518_2493578_2493777_2494045_2500655_2500743_2508799
H1_mix_00056066	chr20	-	1279	13	FSM	ENSG00000101365.21	ENST00000474315.5	1279	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	222.971597593356	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTGAATTTGTTTTTA	16	True	NA	-6	True	AATAAA	-14	NA	2664189	2658394	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_2658523_2658758_2658838_2659524_2659586_2659698_2659794_2660029_2660177_2660262_2660366_2660456_2660591_2660696_2660830_2660908_2660970_2663445_2663567_2663659_2663759_2663924_2664006_2664152
H1_mix_00056067	chr20	-	1542	12	FSM	ENSG00000101365.21	ENST00000380843.9	1542	12	0	0	0	0	multi-exon	FALSE	canonical	3	600	junction_1	73.2316600457606	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTGAATTTGTTTTTA	-11	True	NA	-6	True	AATAAA	-14	NA	2664216	2658394	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_2658838_2659524_2659586_2659698_2659794_2660029_2660177_2660262_2660366_2660456_2660591_2660696_2660830_2660908_2660970_2663445_2663567_2663659_2663759_2663924_2664006_2664152
H1_mix_00056068	chr20	-	1230	12	FSM	ENSG00000101365.21	ENST00000380851.9	1230	12	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	185.810487298437	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTGAATTTGTTTTTA	-14	True	NA	-6	True	AATAAA	-14	NA	2664219	2658394	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_2658523_2659524_2659586_2659698_2659794_2660029_2660177_2660262_2660366_2660456_2660591_2660696_2660830_2660908_2660970_2663445_2663567_2663659_2663759_2663924_2664006_2664152
H1_mix_00056071	chr20	-	2386	14	FSM	ENSG00000088882.8	ENST00000380605.3	2376	14	0	-10	0	10	multi-exon	TRUE	canonical	3	325	junction_6	44.4608730320181	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGTCTCTGTGCCCCAG	-11	True	NA	3	True	ATTAAA	-27	NA	2800627	2794063	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_2794432_2794536_2794640_2795276_2795417_2795598_2795897_2795981_2796162_2796246_2796444_2796526_2796651_2797005_2797095_2797191_2797343_2797967_2798059_2798151_2798292_2798427_2798538_2798725_2798894_2800400
H1_mix_00056072	chr20	-	1979	8	FSM	ENSG00000132635.17	ENST00000360652.7	1979	8	0	0	0	0	multi-exon	FALSE	canonical	2	27	junction_3	11.4873488531284	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTGTGCAGTGGGTAT	6	True	NA	0	True	AATAAA	-25	NA	2840655	2835313	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_2835710_2836038_2836315_2838231_2838479_2838595_2838747_2838843_2839083_2839191_2839272_2839788_2839934_2840210
H1_mix_00056074	chr20	-	4300	5	FSM	ENSG00000185019.17	ENST00000217173.7	4300	5	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_1	27.6676706645138	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTCTGAAGGCAGTTT	5	True	NA	-4	True	AATAAA	-17	NA	3159865	3107572	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_3110315_3115304_3115467_3121383_3122585_3123311_3123407_3159765
H1_mix_00056075	chr20	-	4614	4	FSM	ENSG00000185019.17	ENST00000348031.6	4469	4	-146	1	-146	-1	multi-exon	FALSE	canonical	3	41	junction_1	22.1058061754523	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGCTCTGAAGGCAGTT	7961	False	NA	-5	True	AATAAA	-16	NA	3160342	3107573	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_3110315_3121383_3122585_3123311_3123407_3159765
H1_mix_00056076	chr20	-	2843	2	FSM	ENSG00000215251.5	ENST00000380266.4	2842	2	0	-1	0	1	multi-exon	FALSE	canonical	3	215	junction_1	0	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGTTGGATTTTTCTTT	5	True	NA	1	True	AATAAA	-30	NA	3159865	3146517	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_3149261_3159765
H1_mix_00056077	chr20	-	7178	3	FSM	ENSG00000088899.16	ENST00000329152.7	5257	3	-1924	3	-1924	-3	multi-exon	FALSE	canonical	3	270	junction_1	10.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATTCTTTGGCCTGCTTGT	3127	False	NA	-5	True	AATAAA	-22	NA	3170485	3162619	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_3165153_3165496_3166361_3166704
H1_mix_00056078	chr20	-	4132	5	NNC	ENSG00000088899.16	novel	4055	6	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_3	119.499738493438	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGGCCTGCTTGTGTC	5	True	NA	-2	True	AATAAA	-25	NA	3173546	3162616	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_3165153_3165496_3166361_3166704_3167182_3167798_3167962_3173454
H1_mix_00056080	chr20	-	4196	5	FSM	ENSG00000088899.16	ENST00000337576.7	4196	5	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_3	95.6896023609671	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGGCCTGCTTGTGTC	2	True	NA	-2	True	AATAAA	-25	NA	3173549	3162616	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_3165153_3165496_3166361_3166704_3167182_3167737_3167962_3173454
H1_mix_00056081	chr20	-	1303	9	FSM	ENSG00000198171.13	ENST00000354488.8	1303	9	0	0	0	0	multi-exon	FALSE	canonical	2	307	junction_6	51.2219435398541	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTTTCTTTGTGCCCTG	-17	True	NA	0	True	AAGAAA	-20	NA	3204682	3190349	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_3190820_3191189_3191239_3191764_3191822_3194829_3194869_3195230_3195354_3200000_3200103_3200341_3200455_3203212_3203417_3204536
H1_mix_00056082	chr20	-	1300	9	NNC	ENSG00000198171.13	novel	1303	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	30	junction_5	136.228610706415	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTTTCTTTGTGCCCTG	-17	True	NA	0	True	AAGAAA	-20	NA	3204682	3190349	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_3190820_3191189_3191239_3191764_3191822_3194829_3194869_3195230_3195351_3200000_3200103_3200341_3200455_3203212_3203417_3204536
H1_mix_00056083	chr20	-	480	4	FSM	ENSG00000198171.13	ENST00000470203.1	480	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	208.408253195501	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGTGTGGCTTGGTGTG	9351	False	NA	0	True	ATTAAA	-20	NA	3195314	3190519	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_3190820_3191764_3191822_3194829_3194869_3195230
H1_mix_00056084	chr20	-	5366	19	FSM	ENSG00000088836.14	ENST00000380056.7	3094	19	-1880	-392	-48	392	multi-exon	FALSE	canonical	3	65	junction_13	16.1804065324563	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCATCCCATCTGTTGTG	NA	False	NA	NA	False	NA	NA	NA	3239607	3227024	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_3227857_3228258_3228429_3228511_3228708_3228837_3229012_3229094_3229264_3229345_3229453_3229523_3229777_3230186_3230261_3230514_3230648_3230731_3230846_3230932_3231059_3231148_3231243_3231329_3231549_3233513_3233638_3233920_3234003_3234082_3234315_3234567_3234618_3234741_3234895_3237543
H1_mix_00056085	chr20	-	4379	20	FSM	ENSG00000088836.14	ENST00000380059.7	3229	20	-1024	-126	0	126	multi-exon	FALSE	canonical	3	12	junction_19	25.4446332824996	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCACAGTGGGTGCTGGCC	14	True	NA	NA	False	NA	NA	NA	3239190	3227290	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_3227857_3228258_3228429_3228511_3228708_3228837_3229012_3229094_3229264_3229345_3229453_3229523_3229777_3230186_3230261_3230514_3230648_3230731_3230846_3230932_3231059_3231148_3231243_3231329_3231549_3233513_3233638_3233920_3234003_3234082_3234315_3234567_3234618_3234741_3234895_3237543_3237589_3237892
H1_mix_00056086	chr20	-	3051	20	FSM	ENSG00000088836.14	ENST00000642402.1	3046	20	0	-5	0	0	multi-exon	FALSE	canonical	3	55	junction_19	18.8637041744207	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCACCTGTGTCCCTGC	14	True	NA	-6	True	AATAAA	-22	NA	3239190	3227416	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_3227857_3228258_3228429_3228511_3228708_3228837_3229012_3229094_3229264_3229345_3229453_3229523_3229777_3230186_3230261_3230514_3230648_3230731_3230846_3230932_3231059_3231148_3231243_3231329_3231549_3233513_3233638_3233920_3234003_3234082_3234315_3234567_3234618_3234741_3234895_3237543_3237589_3239094
H1_mix_00056087	chr20	-	3156	20	NIC	ENSG00000088836.14	novel	3229	20	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	3	junction_19	27.0517099986381	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCACCTGTGTCCCTGC	10	False	NA	-6	True	AATAAA	-22	NA	3239548	3227416	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_3227857_3228258_3228429_3228511_3228708_3228837_3229012_3229094_3229264_3229345_3229453_3229523_3229777_3230186_3230261_3230514_3230648_3230731_3230846_3230932_3231059_3231148_3231243_3231329_3231549_3233513_3233638_3233920_3234003_3234082_3234315_3234567_3234618_3234741_3234895_3237543_3237589_3239347
H1_mix_00056090	chr20	-	6924	37	FSM	ENSG00000088854.13	ENST00000252032.10	6912	37	0	-12	0	12	multi-exon	FALSE	canonical	2	8	junction_5	4.77616251765596	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGATGCCTGTGCCATACA	-36	True	NA	1	True	AATAAA	-27	NA	3407669	3249293	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_3252685_3253725_3253820_3255218_3255285_3256005_3256212_3259479_3259555_3259921_3260029_3264437_3264525_3270426_3270563_3278911_3278950_3281640_3281767_3287631_3287791_3290128_3290218_3294138_3294257_3294527_3294630_3296860_3296950_3298028_3298176_3304439_3304544_3315032_3315121_3315734_3315786_3316722_3316794_3318288_3318401_3322216_3322263_3322651_3322697_3324891_3324969_3326196_3326285_3330645_3330683_3332279_3332362_3340503_3340640_3343675_3343732_3348524_3348624_3359515_3359594_3374047_3374155_3375029_3375127_3376177_3376303_3381378_3381499_3382426_3382507_3407474
H1_mix_00056091	chr20	-	264	1	FSM	ENSG00000226632.1	ENST00000430836.1	445	1	424	-243	424	243	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGATCAAGAAAGTCTGT	NA	False	NA	NA	False	NA	NA	NA	3361900	3361636	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_3361600_3361900
H1_mix_00056092	chr20	-	2991	11	FSM	ENSG00000149451.19	ENST00000466620.5	3001	11	0	10	0	0	multi-exon	TRUE	canonical	1	1	junction_5	9.45727233402951	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACACTTGGACCTTGGT	8944	False	NA	NA	False	AATAAA	-14	NA	3673747	3667974	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_3669001_3669298_3669371_3669545_3669638_3671005_3671154_3671236_3671346_3671580_3671780_3671876_3671986_3672133_3672330_3672536_3672627_3672720_3673497_3673573
H1_mix_00056093	chr20	-	4900	14	NIC	ENSG00000149451.19	novel	3674	22	NA	NA	-29	0	intron_retention	FALSE	canonical	2	7	junction_1	7.47777772893215	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACACTTGGACCTTGGT	-4	True	NA	NA	False	AATAAA	-14	NA	3682039	3667974	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_3668998_3669298_3669371_3669545_3669638_3671005_3671154_3671236_3671346_3671418_3671497_3671580_3671780_3671876_3674136_3674218_3674694_3674772_3674850_3675026_3675106_3677066_3677144_3679491_3679572_3681907
H1_mix_00056095	chr20	-	1252	6	FSM	ENSG00000101220.18	ENST00000379772.4	1252	6	0	0	0	0	multi-exon	FALSE	canonical	3	1131	junction_1	42.3065006825192	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGGTGGATTTTTGTTC	-15	True	NA	-4	True	AATAAA	-19	NA	3767753	3753507	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_3754159_3754396_3754520_3755468_3755608_3758535_3758679_3760081_3760187_3767662
H1_mix_00056096	chr20	-	1376	6	FSM	ENSG00000101220.18	ENST00000217195.12	1302	6	-74	0	-21	0	multi-exon	FALSE	canonical	3	25	junction_4	469.044731342332	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGGTGGATTTTTGTTC	584	False	NA	-4	True	AATAAA	-19	NA	3767802	3753507	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_3754159_3754396_3754520_3755468_3755608_3758535_3758679_3760006_3760187_3767662
H1_mix_00056097	chr20	-	1565	7	FSM	ENSG00000101222.12	ENST00000379756.3	1580	7	6	9	6	-9	multi-exon	TRUE	canonical	2	5	junction_2	1.38443731048635	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTCTATTTCCTGTGCC	4	True	NA	NA	False	ATTAAA	-9	NA	3781442	3777512	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_3778320_3778420_3778545_3778745_3778807_3778950_3778991_3779195_3779353_3779663_3779776_3781178
H1_mix_00056098	chr20	-	2891	1	FSM	ENSG00000125817.8	ENST00000379751.5	2890	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCATCCTTCATGGTCTG	-4	True	NA	-9	True	NA	NA	NA	3786740	3783849	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_3783800_3786700
H1_mix_00056099	chr20	-	7330	6	FSM	ENSG00000101236.17	ENST00000358395.11	7328	6	0	-2	0	0	multi-exon	FALSE	canonical	3	43	junction_5	18.1372544780074	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTGCATATGCCTTTG	0	True	NA	0	True	AATAAA	-19	NA	4015558	3927308	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_3934202_3934993_3935074_3945176_3945219_3948236_3948280_3963874_3964025_4015436
H1_mix_00056101	chr20	-	793	1	FSM	ENSG00000226948.2	ENST00000458402.1	793	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTCCCTGGATGGCATG	7345	False	NA	NA	False	NA	NA	NA	4630219	4629426	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_4629400_4630200
H1_mix_00056102	chr20	-	5427	12	FSM	ENSG00000101265.16	ENST00000379400.8	5390	12	-37	0	-37	0	multi-exon	FALSE	canonical	3	33	junction_2	10.0008264121331	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCCCGTGGATGGGTCT	-23	True	NA	-11	True	AATAAA	-17	NA	4823645	4780022	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_4784343_4786230_4786329_4787632_4787755_4788216_4788269_4789595_4789698_4790450_4790612_4792538_4792628_4795814_4795967_4798009_4798086_4800971_4801063_4822328_4822404_4823556
H1_mix_00056103	chr20	-	8073	4	ISM	ENSG00000089057.15	ENST00000338244.6	6953	17	135743	-2	20224	0	3prime_fragment	FALSE	canonical	3	68	junction_3	5.24933858267454	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTCTTCACGTGCCTCC	8690	False	NA	-1	True	AATAAA	-19	NA	4865767	4852355	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_-_4857205_4859288_4859385_4861947_4862086_4862777
H1_mix_00056104	chr20	-	6950	17	FSM	ENSG00000089057.15	ENST00000338244.6	6953	17	3	0	3	0	multi-exon	FALSE	canonical	3	28	junction_16	12.4649508623179	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGCTCTTCACGTGCCT	-5	True	NA	-3	True	AATAAA	-17	NA	5001507	4852357	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_4857205_4859288_4859385_4861947_4862086_4862777_4862908_4867769_4867876_4869905_4870054_4873935_4874093_4874575_4874697_4883641_4883824_4884752_4884824_4885820_4885910_4899554_4899713_4902441_4902559_4912879_4912979_4932454_4932717_4970792_4970920_5001405
H1_mix_00056105	chr20	-	6942	17	NIC	ENSG00000089057.15	novel	6953	17	NA	NA	8	-1	combination_of_known_splicesites	TRUE	canonical	3	25	junction_16	12.9649467314756	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTCTTCACGTGCCTC	0	True	NA	-2	True	AATAAA	-18	NA	5001502	4852356	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_4857205_4859288_4859385_4861947_4862086_4862777_4862908_4867769_4867876_4869905_4870054_4873935_4874093_4874575_4874697_4883641_4883824_4884752_4884824_4885820_4885910_4899554_4899713_4902441_4902559_4912879_4912979_4932454_4932717_4970792_4970916_5001405
H1_mix_00056107	chr20	-	527	4	FSM	ENSG00000089063.15	ENST00000612323.4	1231	4	0	704	0	-704	multi-exon	FALSE	canonical	1	2	junction_1	545.945255700809	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGCCTCTAATTTGAG	2	True	NA	NA	False	NA	NA	NA	5113087	5069186	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_5069350_5106187_5106311_5109331_5109446_5112960
H1_mix_00056108	chr20	-	1642	4	FSM	ENSG00000089063.15	ENST00000379299.6	1642	4	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_3	514.20445566158	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTAATGATTTTATGAT	-3	True	NA	-12	True	AATAAA	-29	NA	5113042	5099839	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_5100932_5106187_5106311_5109331_5109446_5112729
H1_mix_00056109	chr20	-	1636	4	FSM	ENSG00000089063.15	ENST00000379279.6	1636	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	563.669130686513	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTAATGATTTTATGAT	6934	False	5113056	-12	True	AATAAA	-29	NA	5113049	5099839	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_5100932_5106187_5106311_5109331_5109446_5112742
H1_mix_00056110	chr20	-	1660	4	FSM	ENSG00000089063.15	ENST00000379283.6	1660	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	597.590904288953	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTAATGATTTTATGAT	6933	False	5113056	-12	True	AATAAA	-29	NA	5113050	5099839	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_5100932_5106187_5106311_5109331_5109446_5112719
H1_mix_00056111	chr20	-	1551	5	FSM	ENSG00000089063.15	ENST00000342308.10	1541	5	0	-10	0	0	multi-exon	FALSE	canonical	3	16	junction_4	625.230757400818	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTAATGATTTTATGAT	13	True	NA	-12	True	AATAAA	-29	NA	5113076	5099839	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_5100932_5106187_5106311_5109331_5109446_5111499_5111606_5112960
H1_mix_00056112	chr20	-	1461	4	FSM	ENSG00000089063.15	ENST00000202834.11	1472	4	11	0	-5	0	multi-exon	FALSE	canonical	3	1054	junction_3	102.303470126873	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTAATGATTTTATGAT	-3	True	NA	-12	True	AATAAA	-29	NA	5113092	5099839	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_5100932_5106187_5106311_5109331_5109446_5112960
H1_mix_00056113	chr20	-	1276	6	FSM	ENSG00000132646.11	ENST00000379143.10	1276	6	0	0	0	0	multi-exon	FALSE	canonical	3	918	junction_5	102.96989851408	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGCAGTGTCTTCATTTT	-3	True	NA	-4	True	AATAAA	-23	NA	5119958	5114952	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_5115363_5115448_5115573_5117469_5117665_5118609_5118678_5118768_5118867_5119577
H1_mix_00056114	chr20	-	1359	7	FSM	ENSG00000132646.11	ENST00000379160.3	1359	7	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_6	379.653679906657	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGCAGTGTCTTCATTTT	998	False	NA	-4	True	AATAAA	-23	NA	5126626	5114952	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_5115363_5115448_5115573_5117469_5117665_5118609_5118678_5118768_5118867_5119577_5119915_5126499
H1_mix_00056116	chr20	-	4446	3	FSM	ENSG00000101292.8	ENST00000678254.1	4446	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	2.5	232	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACAGGTTTCAAGTGCTT	-1	True	NA	0	True	ATTAAA	-45	NA	5316954	5299217	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_5302737_5313911_5314378_5316493
H1_mix_00056117	chr20	-	6649	15	FSM	ENSG00000125772.14	ENST00000481038.5	6649	15	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_13	7.26046043404175	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAGTTTCCTAACTCAGA	NA	False	NA	-12	True	AATAAA	-16	NA	5586037	5544438	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_5547851_5557944_5558106_5558683_5558820_5559939_5560077_5561464_5561531_5565016_5565079_5566732_5566773_5567482_5567561_5570146_5570240_5573914_5573970_5575412_5575546_5575815_5575979_5578379_5578612_5580007_5580132_5584280
H1_mix_00056118	chr20	-	5442	20	FSM	ENSG00000125772.14	ENST00000379019.7	5434	20	0	-8	0	8	multi-exon	TRUE	canonical	3	44	junction_15	11.1365237244312	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAACTCAGATTGTTTCA	-1	True	NA	-4	True	AATAAA	-24	NA	5611006	5544430	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_5547851_5557944_5558106_5558683_5558820_5559939_5560077_5561464_5561531_5565016_5565079_5566732_5566773_5567482_5567561_5570146_5570240_5573914_5573970_5575412_5575546_5575815_5575979_5578379_5578612_5580007_5580132_5584280_5584323_5586193_5586270_5593326_5593412_5598724_5598822_5604363_5604441_5610841
H1_mix_00056119	chr20	-	1881	17	NIC	ENSG00000125772.14	novel	5434	20	NA	NA	0	960	combination_of_known_splicesites	FALSE	canonical	1	2	junction_16	22.3966375824587	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCAGTTCAGCCTGAGG	12	True	NA	4	True	AATAAA	-23	NA	5610924	5557850	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_5558106_5558683_5558820_5559939_5560077_5561464_5561531_5565016_5565079_5566732_5566773_5567482_5567561_5570146_5570240_5573914_5573970_5575412_5575546_5575815_5575979_5578379_5578612_5580007_5580132_5584280_5584323_5593326_5593412_5598724_5598822_5610841
H1_mix_00056120	chr20	-	819	8	FSM	ENSG00000125772.14	ENST00000481690.2	819	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	19.0166414769071	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTGAGAGTGGAAAGAGT	12	True	NA	NA	False	NA	NA	NA	5610924	5575899	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_5575979_5578379_5578612_5580007_5580132_5584280_5584323_5593326_5593412_5598724_5598822_5604363_5604441_5610841
H1_mix_00056121	chr20	-	3032	11	FSM	ENSG00000089195.15	ENST00000473131.5	3025	11	0	-7	0	0	multi-exon	FALSE	canonical	3	8	junction_6	94.9987368337074	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGGCTCATGCCTGTA	-1	True	NA	NA	False	AATAAA	-14	NA	5950515	5937227	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_5938727_5941052_5941140_5941242_5941346_5941950_5942037_5942427_5942787_5943558_5943684_5943826_5944032_5944161_5944254_5944804_5944915_5946405_5946534_5950277
H1_mix_00056122	chr20	-	2929	11	FSM	ENSG00000089195.15	ENST00000203001.7	2929	11	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_5	29.0199931082004	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGGCTCATGCCTGTA	-19	True	NA	NA	False	AATAAA	-14	NA	5950533	5937227	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_5938727_5941052_5941140_5941242_5941346_5941950_5942037_5942427_5942787_5943558_5943684_5943947_5944032_5944161_5944254_5944804_5944915_5946405_5946534_5950277
H1_mix_00056124	chr20	-	2935	5	FSM	ENSG00000125872.8	ENST00000378858.5	2935	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	2.29128784747792	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCAGTTCCAATTCCTGA	-13	True	NA	NA	False	AAGAAA	-15	NA	6054060	6040545	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_6042247_6044542_6044681_6050778_6050984_6052144_6052805_6053829
H1_mix_00056125	chr20	-	2479	1	FSM	ENSG00000278192.1	ENST00000619370.1	1932	1	-559	12	-559	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	315	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTTCAAAAAAATACCTAAT	7433	False	NA	NA	False	ATTAAA	-5	NA	6068456	6065977	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_6066000_6068500
H1_mix_00056126	chr20	-	6103	8	FSM	ENSG00000125827.9	ENST00000246024.7	6103	8	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_7	14.4207899809084	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTCTGTTCATTCATTC	-3	True	NA	1	True	NA	NA	NA	8019761	7977345	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_7982622_7983793_7983858_7987287_7987390_7996025_7996072_7999731_7999861_8001495_8001542_8010199_8010316_8019437
H1_mix_00056127	chr20	-	6571	6	FSM	ENSG00000125863.20	ENST00000347364.7	6714	6	0	143	0	-143	multi-exon	FALSE	canonical	3	216	junction_3	479.853727712935	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGCGCACTAAAATCCATA	-26	True	NA	NA	False	NA	NA	NA	10434222	10401151	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_10405688_10407615_10407727_10408627_10408804_10412529_10413932_10420527_10420759_10434107
H1_mix_00056128	chr20	-	6181	7	FSM	ENSG00000125863.20	ENST00000651692.1	6181	7	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_6	350.231669359329	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCATCACATACATTA	-18	True	NA	NA	False	AATAAA	-9	NA	10434214	10401620	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_10405688_10407615_10407727_10408627_10408804_10412529_10413932_10420527_10420759_10428729_10428817_10434107
H1_mix_00056129	chr20	-	1324	1	FSM	ENSG00000235036.4	ENST00000456064.1	1369	1	-68	113	-68	-113	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTTCATTTTACTCAGC	NA	False	NA	NA	False	AATAGA	-3	NA	10614297	10612973	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_10613000_10614300
H1_mix_00056130	chr20	-	5970	26	FSM	ENSG00000101384.12	ENST00000254958.10	5940	26	0	-30	0	30	multi-exon	FALSE	canonical	3	88	junction_17	10.985372092014	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGGGGAACTGGCCACAG	0	True	NA	27	True	NA	NA	NA	10673999	10637653	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_10639956_10640782_10640934_10641112_10641245_10641459_10641694_10641782_10641893_10642487_10642602_10643777_10643864_10644356_10644385_10644862_10644980_10645142_10645257_10645355_10645470_10645970_10646085_10646938_10647104_10647959_10648111_10648548_10648723_10649060_10649108_10649521_10649636_10650246_10650361_10651580_10651695_10652130_10652251_10652467_10652599_10656397_10656459_10658467_10658723_10663962_10664015_10672700_10673007_10673449
H1_mix_00056131	chr20	-	232	1	FSM	ENSG00000278153.1	ENST00000611242.1	413	1	193	-12	193	12	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTAATTTAATTAAATTG	NA	False	NA	NA	False	AATAAA	-36	NA	13368510	13368278	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_13368300_13368500
H1_mix_00056132	chr20	-	2388	14	FSM	ENSG00000089123.16	ENST00000337743.9	2342	14	0	-46	0	44	multi-exon	FALSE	canonical	3	73	junction_10	10.9414796225813	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATACCATTATCCATCT	-9	True	NA	42	True	TATAAA	-14	NA	13638932	13389347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_13390453_13417447_13417522_13435043_13435155_13483226_13483338_13528432_13528512_13534021_13534142_13559007_13559115_13569506_13569587_13580896_13580982_13587249_13587371_13623445_13623515_13625184_13625253_13629933_13630153_13638893
H1_mix_00056133	chr20	-	2302	14	FSM	ENSG00000089123.16	ENST00000480436.5	2302	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	25.9940821667607	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAGAGCTATTATTTATT	20	False	NA	-2	True	AATAAA	-20	NA	13638903	13389391	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_13390453_13417447_13417522_13435043_13435155_13483226_13483338_13528445_13528512_13534021_13534142_13559007_13559115_13569506_13569587_13580896_13580982_13587249_13587371_13623445_13623515_13625184_13625253_13629933_13630153_13638893
H1_mix_00056136	chr20	-	3191	14	FSM	ENSG00000089048.15	ENST00000617257.2	3188	14	0	-3	0	0	multi-exon	FALSE	canonical	3	280	junction_9	25.3115498579802	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTATAGCACTGATTTA	-13	True	NA	-11	True	AATAAA	-21	NA	13784919	13714321	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_13715168_13717367_13717515_13718907_13718985_13728377_13728466_13733720_13733843_13759691_13759854_13766776_13766925_13769906_13770022_13771330_13771484_13772514_13772616_13775156_13775271_13775872_13776271_13782503_13783184_13784879
H1_mix_00056137	chr20	-	4779	2	FSM	ENSG00000125848.10	ENST00000378053.3	4776	2	0	-3	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTGTTTTCCACACAGA	2	True	NA	NA	False	ATTAAA	-19	NA	14337608	14322984	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_14327559_14337403
H1_mix_00056138	chr20	-	4977	3	FSM	ENSG00000125848.10	ENST00000341420.5	4977	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	9	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTGTTTTCCACACAGA	-2	True	NA	NA	False	ATTAAA	-19	NA	14337612	14322984	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_14327559_14329133_14329328_14337403
H1_mix_00056139	chr20	-	5245	25	FSM	ENSG00000089177.19	ENST00000636835.1	5109	25	56	-192	55	192	multi-exon	TRUE	canonical	0	0	junction_23	17.6863098343198	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCCTTCACAACAAAGTT	-22	True	NA	NA	False	AATGAA	-38	NA	16573378	16271911	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_16273412_16312334_16312419_16335925_16336016_16356329_16356453_16370585_16370637_16371664_16371762_16378804_16380164_16381693_16381748_16404812_16404902_16406373_16406457_16427103_16427242_16428952_16429005_16429862_16429983_16494290_16494351_16497612_16497679_16504371_16504548_16505721_16505854_16506021_16506191_16507957_16508101_16511417_16511528_16512825_16512924_16515547_16515665_16526091_16526206_16528370_16528441_16573228
H1_mix_00056140	chr20	-	5034	25	NIC	ENSG00000089177.19	novel	5276	26	NA	NA	104	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_23	18.0131125078989	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTAGCTCAGCTTATTT	27	True	NA	-16	True	ATTAAA	-18	NA	16573329	16272103	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_16273412_16312334_16312419_16335925_16336016_16370585_16370637_16371664_16371762_16374256_16374410_16378804_16380164_16381693_16381748_16404812_16404902_16406373_16406457_16427103_16427242_16428952_16429005_16429862_16429983_16494290_16494351_16497612_16497679_16504371_16504548_16505721_16505854_16506021_16506191_16507957_16508101_16511417_16511528_16512825_16512924_16515547_16515665_16526091_16526206_16528370_16528441_16573228
H1_mix_00056141	chr20	-	5277	26	FSM	ENSG00000089177.19	ENST00000354981.7	5276	26	0	-1	0	1	multi-exon	FALSE	canonical	0	0	junction_24	14.8431802522236	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTAGCTCAGCTTATTTT	2	True	NA	-15	True	ATTAAA	-19	NA	16573448	16272102	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_16273412_16312334_16312419_16335925_16336016_16356329_16356453_16370585_16370637_16371664_16371762_16374256_16374410_16378804_16380164_16381693_16381748_16404812_16404902_16406373_16406457_16427103_16427242_16428952_16429005_16429862_16429983_16494290_16494351_16497612_16497679_16504371_16504548_16505721_16505854_16506021_16506191_16507957_16508101_16511417_16511528_16512825_16512924_16515547_16515665_16526091_16526206_16528370_16528441_16573228
H1_mix_00056142	chr20	-	2384	2	FSM	ENSG00000089177.19	ENST00000635823.1	2475	2	0	91	0	-91	multi-exon	FALSE	canonical	3	14	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCACCTTGCTTCATTTT	9453	False	NA	-23	True	AATAAA	-42	NA	16370636	16366933	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_16369267_16370585
H1_mix_00056143	chr20	-	2219	8	FSM	ENSG00000125864.14	ENST00000377873.8	2217	8	0	-2	0	2	multi-exon	FALSE	canonical	3	25	junction_2	4.05069910821652	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTTGTCTAATTAATAGG	-27	True	NA	1	True	ATTAAA	-21	NA	17531379	17493902	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_17495030_17496937_17497024_17498819_17499041_17508888_17508997_17511975_17512069_17514720_17514817_17524847_17524909_17530952
H1_mix_00056144	chr20	-	303	1	FSM	ENSG00000277373.1	ENST00000610812.1	351	1	47	1	47	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAAGGTGTGACTGTTCA	3415	False	NA	-4	True	AATAAA	-17	NA	17565804	17565501	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_17565500_17565800
H1_mix_00056145	chr20	-	305	1	FSM	ENSG00000202260.1	ENST00000365390.1	305	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAGACTAATCTTGGAG	-1	False	NA	NA	False	AAAACA	-43	NA	17576510	17576205	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_17576200_17576500
H1_mix_00056146	chr20	-	4964	26	NNC	ENSG00000125844.17	novel	5049	25	NA	NA	0	29942	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	191.340433782303	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACTCCAAACCCATTAGC	9	True	NA	NA	False	NA	NA	NA	17682242	17583735	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_17583759_17613679_17614221_17614736_17614881_17615430_17615530_17615925_17616010_17616731_17616840_17618595_17618680_17619632_17619729_17620298_17620371_17620714_17620808_17621457_17621548_17621689_17621774_17621854_17621948_17624575_17624669_17625511_17625603_17627347_17627383_17627503_17627683_17629822_17629962_17633459_17633614_17635545_17635665_17636576_17636730_17641796_17641920_17642978_17643128_17658595_17659088_17659117_17660529_17682027
H1_mix_00056147	chr20	-	2200	6	FSM	ENSG00000125844.17	ENST00000468428.1	2200	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	216.625575590695	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGGTCTCGTCTGGTCTT	7573	False	NA	-5	True	ATTAAA	-21	NA	17619817	17613677	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_17614221_17614736_17614881_17615430_17615530_17615925_17616010_17616731_17616840_17618595
H1_mix_00056148	chr20	-	5050	25	FSM	ENSG00000125844.17	ENST00000377813.6	5049	25	0	-1	0	0	multi-exon	FALSE	canonical	0	0	junction_2	163.157643604787	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGGTCTCGTCTGGTCTT	9	True	NA	-5	True	ATTAAA	-21	NA	17682242	17613677	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_17614221_17614736_17614881_17615430_17615530_17615925_17616010_17616731_17616840_17618595_17618680_17619632_17619729_17620298_17620371_17620714_17620808_17621457_17621548_17621689_17621774_17621854_17621948_17624575_17624669_17625511_17625603_17627347_17627383_17627503_17627683_17629822_17629962_17633459_17633614_17635545_17635665_17636576_17636730_17641796_17641920_17642978_17643128_17658595_17660529_17679998_17680076_17682027
H1_mix_00056149	chr20	-	1191	2	FSM	ENSG00000125844.17	ENST00000398782.2	1191	2	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAGAAGGGGCCCAGAACC	NA	False	NA	NA	False	GGGGCT	-18	NA	17682295	17659605	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_17660529_17682027
H1_mix_00056150	chr20	-	1325	2	FSM	ENSG00000089006.17	ENST00000484809.1	1321	2	0	-4	0	1	multi-exon	FALSE	canonical	3	861	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCCTGTTTTCGTGGAAAC	1995	False	NA	-23	True	AATAAA	-21	NA	17943622	17941595	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_17942408_17943109
H1_mix_00056151	chr20	-	3935	1	FSM	ENSG00000089006.17	ENST00000606570.1	3931	1	0	-4	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCCTGTTTTCGTGGAAAC	87	False	NA	-23	True	AATAAA	-21	NA	17945530	17941595	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_17941600_17945500
H1_mix_00056152	chr20	-	3088	14	FSM	ENSG00000089006.17	ENST00000483485.5	3087	14	0	-1	0	1	multi-exon	FALSE	canonical	3	8	junction_8	304.830964896553	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCCTGTTTTCGTGGAAAC	6830	False	NA	-23	True	AATAAA	-21	NA	17961995	17941595	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_17942408_17943109_17943196_17947485_17947646_17948889_17948977_17949063_17949104_17950131_17950208_17950290_17950397_17951020_17951328_17951499_17951596_17952586_17952711_17953995_17954118_17955364_17955476_17956932_17957038_17961139
H1_mix_00056153	chr20	-	2345	13	FSM	ENSG00000089006.17	ENST00000377759.9	2341	13	0	-4	0	1	multi-exon	FALSE	canonical	3	590	junction_10	86.4744663662826	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCCTGTTTTCGTGGAAAC	-3	True	NA	-23	True	AATAAA	-21	NA	17968794	17941595	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_17942408_17943109_17943196_17947485_17947646_17948889_17948977_17949063_17949104_17950131_17950208_17950290_17950397_17951499_17951596_17952586_17952711_17953995_17954118_17955364_17955476_17956932_17957038_17968374
H1_mix_00056154	chr20	-	2289	14	FSM	ENSG00000089006.17	ENST00000377768.7	2288	14	0	-1	0	1	multi-exon	FALSE	canonical	3	371	junction_13	125.901295047647	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCCTGTTTTCGTGGAAAC	NA	False	NA	-23	True	AATAAA	-21	NA	17968980	17941595	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_17942408_17943109_17943196_17947485_17947646_17948889_17948977_17949063_17949104_17950131_17950208_17950290_17950397_17951499_17951596_17952586_17952711_17953995_17954118_17955364_17955476_17956932_17957038_17968374_17968458_17968699
H1_mix_00056155	chr20	-	1081	9	FSM	ENSG00000089006.17	ENST00000431277.5	840	9	-241	0	57	0	multi-exon	FALSE	canonical	3	19	junction_7	242.851774494238	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAAGAGAGTTGCTCAG	126	False	NA	NA	False	NA	NA	NA	17968699	17948889	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_17948977_17949063_17949104_17950131_17950208_17950290_17950397_17951499_17951596_17952586_17952711_17953995_17954118_17956932_17957038_17968374
H1_mix_00056156	chr20	-	237	1	FSM	ENSG00000212232.1	ENST00000390930.1	237	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGCAGCCCTTTAGTTT	-14	True	NA	NA	False	NA	NA	NA	17962946	17962709	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_17962700_17962900
H1_mix_00056157	chr20	-	885	2	FSM	ENSG00000089006.17	ENST00000606602.1	885	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCCTCCACTCTTTTTCA	6	True	NA	-19	True	AATAAA	-33	NA	17968785	17967687	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_17968162_17968374
H1_mix_00056158	chr20	-	602	2	FSM	ENSG00000089006.17	ENST00000486039.1	602	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAGATGATCTCTGGAGA	-3	True	NA	NA	False	NA	NA	NA	17968794	17968107	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_17968290_17968374
H1_mix_00056159	chr20	-	1604	4	FSM	ENSG00000125850.11	ENST00000278780.7	1583	4	0	-21	0	21	multi-exon	FALSE	canonical	3	46	junction_3	17.9071680247511	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTCAGGGCTTATTGTG	-14	True	NA	5	True	TTTAAA	-29	NA	18057916	18024141	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_18024953_18041533_18041724_18056656_18056878_18057534
H1_mix_00056160	chr20	-	1682	3	ISM	ENSG00000125850.11	ENST00000278780.7	1583	4	459	99	459	0	3prime_fragment	FALSE	canonical	3	80	junction_2	3.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGTTTAAGCAAGGCAAG	1755	False	NA	-17	True	AATAAA	-18	NA	18057457	18024261	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_-_18024953_18041533_18041724_18056656
H1_mix_00056161	chr20	-	1263	4	FSM	ENSG00000125850.11	ENST00000483661.5	1263	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	36.6454484061648	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGTTTAAGCAAGGCAAG	162	False	NA	-17	True	AATAAA	-18	NA	18059050	18024261	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_18024953_18041533_18041724_18056656_18056878_18058889
H1_mix_00056162	chr20	-	2280	5	NNC	ENSG00000125850.11	novel	1583	4	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	34.0477605724664	3520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGTTTAAGCAAGGCAAG	142	False	NA	-17	True	AATAAA	-18	NA	18059070	18024261	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_18024953_18041533_18041724_18056656_18056878_18057534_18058345_18058702
H1_mix_00056163	chr20	-	1709	7	FSM	ENSG00000089091.16	ENST00000476058.5	1709	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	35.4843470968382	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTCATTCCTTTCTT	NA	False	NA	0	True	AATAAA	-21	NA	18394703	18383366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_18384565_18385015_18385091_18389700_18389829_18390378_18390460_18393710_18393812_18394253_18394351_18394674
H1_mix_00056164	chr20	-	2322	10	NIC	ENSG00000089091.16	novel	3295	20	NA	NA	0	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_9	33.7638860322683	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTCATTCCTTTCTT	-1	True	NA	0	True	AATAAA	-21	NA	18413222	18383366	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_18384565_18385015_18385091_18389700_18389829_18390378_18390460_18393710_18393812_18394253_18394351_18396471_18396547_18398522_18398627_18412645_18412854_18412967
H1_mix_00056165	chr20	-	2931	17	FSM	ENSG00000089091.16	ENST00000357236.8	3739	17	812	-4	812	0	multi-exon	FALSE	non_canonical	0	0	junction_9	32.744691840816	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTCATTCCTTTCTT	NA	False	NA	0	True	AATAAA	-21	NA	18453827	18383366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_18384565_18385015_18385091_18389700_18389829_18390378_18390460_18393710_18393812_18394253_18394351_18396471_18396547_18398522_18398627_18412645_18412854_18414347_18414513_18415326_18415450_18427066_18427160_18433651_18433766_18443346_18443465_18448983_18449070_18452614_18452683_18453730
H1_mix_00056166	chr20	-	3451	21	NNC	ENSG00000089091.16	novel	3295	20	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	31.0425514415294	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTCATTCCTTTCTT	NA	False	NA	0	True	AATAAA	-21	NA	18467059	18383366	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_18384565_18385015_18385091_18389700_18389829_18390378_18390460_18393710_18393812_18394253_18394351_18396471_18396547_18398522_18398627_18412645_18412854_18414347_18414513_18415326_18415450_18427066_18427160_18433651_18433766_18443346_18443465_18448983_18449070_18452614_18452740_18453730_18453828_18455246_18455362_18460152_18460307_18465249_18465380_18466995
H1_mix_00056167	chr20	-	3398	21	NNC	ENSG00000089091.16	novel	3498	21	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	30.4704364917866	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTCATTCCTTTCTT	NA	False	NA	0	True	AATAAA	-21	NA	18467067	18383366	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_18384565_18385015_18385091_18389700_18389829_18390378_18390460_18393710_18393812_18394253_18394351_18396471_18396547_18398522_18398627_18412645_18412854_18414347_18414513_18415326_18415450_18427066_18427160_18433651_18433766_18443346_18443465_18448983_18449070_18452614_18452683_18453730_18453828_18455246_18455362_18460152_18460307_18465249_18465376_18466995
H1_mix_00056168	chr20	-	1721	7	NNC	ENSG00000089091.16	novel	1709	7	NA	NA	201	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_6	32.4636548911069	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTCATTCCTTTCTT	NA	False	NA	0	True	AATAAA	-21	NA	18394502	18383366	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_18384565_18385015_18385091_18389700_18389829_18390378_18390460_18393710_18393812_18394253_18394351_18394461
H1_mix_00056169	chr20	-	3843	5	FSM	ENSG00000089050.16	ENST00000337227.9	3843	5	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_4	14.1155942134931	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGAAGTTTCTCTTTATT	7	True	NA	NA	False	ATTAAA	-20	NA	18497225	18486539	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_18489991_18490394_18490481_18493957_18494064_18495837_18495881_18497068
H1_mix_00056170	chr20	-	830	4	FSM	ENSG00000089050.16	ENST00000491835.1	830	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	47.588514020367	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGTAAAATTAAATAGGT	15	True	NA	NA	False	NA	NA	NA	18497174	18489458	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_18489991_18490394_18490481_18493957_18494064_18497068
H1_mix_00056171	chr20	-	718	1	FSM	ENSG00000268628.2	ENST00000598007.2	1648	1	981	-51	981	51	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTGACTCAGATTGGGGGA	875	False	NA	48	True	NA	NA	NA	19757056	19756338	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_19756300_19757100
H1_mix_00056172	chr20	-	501	1	FSM	ENSG00000236992.2	ENST00000424633.1	501	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	867	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAGGAAAATATTTCAATA	85	False	NA	NA	False	NA	NA	NA	19823943	19823442	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_19823400_19823900
H1_mix_00056173	chr20	-	4015	14	FSM	ENSG00000101343.15	ENST00000536226.2	4015	14	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_11	24.6749279838041	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTCTTGTGGGTTTTTC	-16	True	NA	NA	False	AGTAAA	-24	NA	20052466	20034367	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_20036363_20037322_20037572_20038348_20038451_20039608_20039849_20040685_20040767_20041565_20041626_20042324_20042517_20043491_20043663_20045307_20045487_20047764_20047932_20048342_20048502_20049339_20049432_20050469_20050623_20052291
H1_mix_00056174	chr20	-	8791	33	FSM	ENSG00000188559.16	ENST00000430436.5	8769	33	0	-22	0	0	multi-exon	TRUE	canonical	3	10	junction_1	15.2744425021013	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAATTGTGTGAAAGCATA	NA	False	NA	-1	True	AATAAA	-25	NA	20639900	20389529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_20393254_20412026_20412149_20472828_20472957_20495116_20495276_20503350_20503507_20505410_20505535_20511253_20511326_20512512_20513285_20520916_20521101_20524405_20524544_20524829_20524899_20526251_20526363_20531686_20531796_20535744_20535804_20536655_20536785_20546703_20546833_20571457_20571614_20571847_20571947_20572874_20573069_20583049_20583227_20584864_20584956_20589267_20589366_20591176_20591315_20601681_20601847_20605174_20605413_20611314_20611427_20616042_20616192_20619276_20619415_20620462_20620631_20629362_20629591_20635417_20635618_20637362_20637502_20639784
H1_mix_00056175	chr20	-	9545	40	FSM	ENSG00000188559.16	ENST00000202677.12	9545	40	0	0	0	0	multi-exon	TRUE	canonical	3	43	junction_38	12.4546250739663	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAATTGTGTGAAAGCATA	5	True	NA	-1	True	AATAAA	-25	NA	20712644	20389529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_20393254_20396694_20396735_20412026_20412149_20472828_20472957_20495116_20495276_20503350_20503507_20505410_20505535_20511253_20511326_20512512_20513285_20520916_20521101_20524405_20524544_20524829_20524899_20526251_20526363_20531686_20531796_20535744_20535804_20536655_20536785_20546703_20546833_20571457_20571614_20571847_20571947_20572874_20573069_20583049_20583227_20584864_20584956_20589267_20589366_20591176_20591315_20601681_20601847_20605174_20605413_20611314_20611427_20616042_20616192_20619276_20619415_20620462_20620631_20629362_20629591_20635417_20635618_20637362_20637502_20639784_20639901_20640700_20640879_20643505_20643550_20653529_20653588_20676235_20676289_20680690_20680802_20712374
H1_mix_00056177	chr20	-	897	2	FSM	ENSG00000225127.4	ENST00000420705.2	1288	2	209	182	48	-182	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTGGAAAACCCTATTAG	75	False	NA	NA	False	NA	NA	NA	21106305	21092990	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_21093853_21106270
H1_mix_00056178	chr20	-	470	1	FSM	ENSG00000214535.3	ENST00000457423.1	391	1	-16	-63	-16	63	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATACAAAAATTAGCCAAGCA	NA	False	NA	NA	False	AATAAA	-36	NA	21166612	21166142	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_21166100_21166600
H1_mix_00056179	chr20	-	996	1	FSM	ENSG00000275457.1	ENST00000622628.1	974	1	0	-22	0	22	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAATACAATCTTCCAGC	NA	False	NA	14	True	AATAAA	-43	NA	21303704	21302708	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_21302700_21303700
H1_mix_00056180	chr20	-	1287	1	FSM	ENSG00000278041.1	ENST00000622757.1	3674	1	37	2350	37	-2350	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTCCTTCTTCAGTCTC	9479	False	NA	NA	False	NA	NA	NA	21502897	21501610	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_21501600_21502900
H1_mix_00056181	chr20	-	1066	1	FSM	ENSG00000225170.2	ENST00000413920.2	1403	1	335	2	335	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGAAGACAGAAGGAGAAC	NA	False	NA	NA	False	AGTAAA	-21	NA	22273119	22272053	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_22272100_22273100
H1_mix_00056182	chr20	-	4239	5	NNC	ENSG00000259974.4	novel	1840	5	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.7982184208642	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCTGTATTTCTTTGCA	6923	False	NA	NA	False	AATAAA	-16	NA	22578567	22560552	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_22563292_22563894_22565117_22566682_22566811_22567793_22567886_22578509
H1_mix_00056183	chr20	-	907	4	ISM	ENSG00000259974.4	ENST00000638550.3	1840	5	5	3948	5	-3709	5prime_fragment	FALSE	canonical	3	87	junction_1	7.58653778449403	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGAGTCTTCTGTGACTA	1	True	NA	-5	True	AATAAA	-15	NA	22578580	22564500	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_-_22565117_22566682_22566811_22567793_22567886_22578509
H1_mix_00056184	chr20	-	2539	2	FSM	ENSG00000125798.15	ENST00000419308.7	2538	2	0	-1	0	1	multi-exon	FALSE	canonical	3	167	junction_1	0	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATGAATTTTACAGTAGG	-6	True	NA	NA	False	AATAAA	-21	NA	22584572	22580996	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_22583155_22584191
H1_mix_00056185	chr20	-	658	3	FSM	ENSG00000232645.6	ENST00000687401.1	692	3	21	13	18	-5	multi-exon	FALSE	canonical	2	7	junction_1	5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCACCTTCATCTGCCT	4564	False	NA	NA	False	AATAAA	-11	NA	23358154	23356598	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_23356970_23357050_23357138_23357954
H1_mix_00056187	chr20	-	3837	11	FSM	ENSG00000125814.17	ENST00000377026.4	3837	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	27.7562605550532	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCTTGTTTTATTTTAA	-33	True	NA	-1	True	AATAAA	-19	NA	23421488	23374521	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_23377487_23379444_23379496_23379866_23379936_23381212_23381318_23389945_23390031_23390208_23390265_23394921_23395000_23395138_23395186_23397071_23397189_23402992_23403073_23421304
H1_mix_00056188	chr20	-	3599	9	NIC	ENSG00000125814.17	novel	3837	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_7	19.4578872182979	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCTTGTTTTATTTTAA	41	True	NA	-1	True	AATAAA	-19	NA	23421414	23374521	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_23377487_23379444_23379496_23379866_23379936_23381212_23381318_23389945_23390031_23390208_23390265_23394921_23395000_23402992_23403073_23421304
H1_mix_00056189	chr20	-	3898	11	NNC	ENSG00000125814.17	novel	3837	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_8	31.372758884102	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCTTGTTTTATTTTAA	-17	True	NA	-1	True	AATAAA	-19	NA	23421472	23374521	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_23377487_23379444_23379496_23379866_23379936_23381212_23381318_23389945_23390031_23390208_23390265_23394921_23395000_23395138_23395263_23397071_23397189_23402992_23403073_23421304
H1_mix_00056190	chr20	-	3779	10	FSM	ENSG00000125814.17	ENST00000398425.7	3824	10	42	3	-5	0	multi-exon	TRUE	canonical	3	21	junction_7	27.1129325435503	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCTTGTTTTATTTTAA	-22	True	NA	-1	True	AATAAA	-19	NA	23421477	23374521	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_23377487_23379444_23379496_23379866_23379936_23381212_23381318_23389945_23390031_23390208_23390265_23394921_23395000_23397071_23397189_23402992_23403073_23421304
H1_mix_00056191	chr20	-	3849	11	FSM	ENSG00000125814.17	ENST00000617876.4	3883	11	31	3	0	0	multi-exon	TRUE	canonical	3	4	junction_9	34.5498191022761	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCTTGTTTTATTTTAA	-33	True	NA	-1	True	AATAAA	-19	NA	23421488	23374521	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_23377487_23379444_23379496_23379866_23379936_23381212_23381318_23389945_23390031_23390208_23390265_23394921_23395000_23395138_23395186_23397071_23397201_23402992_23403073_23421304
H1_mix_00056194	chr20	-	2943	4	FSM	ENSG00000101439.9	ENST00000398411.5	3286	4	0	343	0	-343	multi-exon	FALSE	canonical	1	28	junction_1	442.218900043356	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGAAAATTAAATGTCAGT	39	False	NA	NA	False	AATATA	-41	NA	23637945	23627048	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_23629466_23633913_23634000_23635253_23635368_23637619
H1_mix_00056195	chr20	-	793	3	FSM	ENSG00000101439.9	ENST00000376925.8	793	3	0	0	0	0	multi-exon	FALSE	canonical	3	933	junction_2	31.5	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCTGAGTTCTTGGCTG	1	True	NA	-10	True	AATAAA	-15	NA	23637955	23633656	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_23634000_23635253_23635368_23637619
H1_mix_00056196	chr20	-	902	4	FSM	ENSG00000101439.9	ENST00000398409.1	832	4	-70	0	-70	0	multi-exon	FALSE	canonical	2	12	junction_3	449.748818786665	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCTGAGTTCTTGGCTG	NA	False	NA	-10	True	AATAAA	-15	NA	23638543	23633656	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_23634000_23635253_23635368_23637619_23637933_23638411
H1_mix_00056197	chr20	-	754	3	FSM	ENSG00000170373.9	ENST00000304749.7	749	3	0	-5	0	5	multi-exon	FALSE	canonical	3	51	junction_1	2	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGTTCTTGGCTGTCTGG	-1	True	NA	NA	False	ATTAAA	-19	NA	23750935	23747556	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_23747900_23749015_23749130_23750638
H1_mix_00056198	chr20	-	2118	10	FSM	ENSG00000101474.12	ENST00000451442.5	2117	10	0	-1	0	1	multi-exon	FALSE	canonical	3	7	junction_2	270.576522117104	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATGGTGTGGCCTGGGAG	136	False	NA	-3	True	AATAAA	-35	NA	24992642	24962923	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_24964023_24964374_24964399_24968891_24969085_24969525_24969661_24970196_24970372_24971459_24971577_24973644_24973738_24978766_24978883_24983902_24984020_24992593
H1_mix_00056199	chr20	-	2203	9	FSM	ENSG00000101474.12	ENST00000217456.3	2202	9	0	-1	0	1	multi-exon	FALSE	canonical	3	580	junction_2	56.0600961023079	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATGGTGTGGCCTGGGAG	27	False	24992778	-3	True	AATAAA	-35	NA	24992751	24962923	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_24964023_24968891_24969085_24969525_24969661_24970196_24970372_24971459_24971577_24973644_24973738_24978766_24978883_24983902_24984020_24992593
H1_mix_00056200	chr20	-	3639	14	FSM	ENSG00000154930.15	ENST00000323482.9	3632	14	0	-7	0	0	multi-exon	FALSE	canonical	2	4	junction_5	3.98814812209714	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGTGATTTTTTTGGG	-7	True	NA	2	True	AATAAA	-23	NA	25058139	25006229	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_25007942_25009269_25009389_25012600_25012665_25012811_25012940_25013535_25013663_25013960_25014074_25015137_25015231_25020009_25020148_25021388_25021537_25022939_25023093_25023465_25023642_25030758_25030959_25048084_25048182_25057768
H1_mix_00056201	chr20	-	463	1	FSM	ENSG00000276952.1	ENST00000610840.1	674	1	282	-71	282	71	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAACACATACTATCTTAA	NA	False	NA	NA	False	ATTAAA	-32	NA	25285306	25284843	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_25284800_25285300
H1_mix_00056202	chr20	-	1577	13	FSM	ENSG00000100997.20	ENST00000376542.8	1577	13	0	0	0	0	multi-exon	TRUE	canonical	1	53	junction_1	290.112717558002	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCGTTGCAAGTGAAATCC	-12	True	NA	NA	False	AATAAA	-24	NA	25390835	25294742	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_25295031_25302218_25302347_25303549_25303629_25306832_25306916_25307965_25308046_25308456_25308495_25309445_25309576_25314924_25314971_25317047_25317079_25320198_25320319_25323324_25323431_25339226_25339352_25390512
H1_mix_00056203	chr20	-	1976	13	FSM	ENSG00000100997.20	ENST00000339157.10	1960	13	0	-16	0	15	multi-exon	FALSE	canonical	1	320	junction_4	179.691150929093	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGCGAGAAGGGTCAATGTT	-12	True	NA	-5	True	AATAAA	-32	NA	25390835	25300197	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_25300885_25302218_25302347_25303549_25303629_25306832_25306916_25307965_25308046_25308456_25308495_25309445_25309576_25314924_25314971_25317047_25317079_25320198_25320319_25323324_25323431_25339226_25339352_25390512
H1_mix_00056204	chr20	-	585	5	FSM	ENSG00000100997.20	ENST00000576316.5	620	5	0	35	0	-35	multi-exon	FALSE	canonical	1	320	junction_2	259.246986482003	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAGCAGATAGTTCCC	1334	False	NA	NA	False	NA	NA	NA	25309498	25303297	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_25303629_25306832_25306916_25307965_25308046_25308456_25308495_25309445
H1_mix_00056206	chr20	-	552	1	FSM	ENSG00000227379.2	ENST00000414143.1	492	1	161	-221	161	221	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGGCAATGATATGAGAAAT	1320	False	NA	NA	False	AATAAA	-27	NA	25368605	25368053	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_25368100_25368600
H1_mix_00056207	chr20	-	1380	2	ISM	ENSG00000101004.15	ENST00000464285.5	1514	3	2870	-140	2870	0	3prime_fragment	FALSE	canonical	3	247	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTAAGTTTGTTTTTAAT	NA	False	NA	-6	True	AATAAA	-21	NA	25456106	25452696	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_-_25453643_25455672
H1_mix_00056208	chr20	-	5111	25	NNC	ENSG00000101004.15	novel	4991	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_20	57.5967784592931	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTAAGTTTGTTTTTAAT	17	True	NA	-6	True	AATAAA	-21	NA	25585531	25452696	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_25453643_25455672_25455787_25458382_25458530_25461521_25461636_25462382_25462542_25467388_25467459_25469990_25470096_25476042_25477090_25478922_25479207_25480160_25480268_25481967_25482101_25489243_25489325_25489874_25489986_25491350_25491526_25496662_25496804_25498209_25498347_25500839_25501011_25503951_25504105_25504887_25505079_25509669_25509790_25510673_25510741_25512833_25513007_25517752_25517850_25526407_25526599_25585454
H1_mix_00056209	chr20	-	4991	24	FSM	ENSG00000101004.15	ENST00000278886.11	4991	24	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_18	39.7899019211663	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTAAGTTTGTTTTTAAT	17	True	NA	-6	True	AATAAA	-21	NA	25585531	25452696	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_25453643_25455672_25455787_25458382_25458530_25461521_25461636_25462382_25462542_25467388_25467459_25469990_25470096_25476042_25477090_25478922_25479207_25480160_25480268_25481967_25482101_25489243_25489325_25489874_25489986_25491350_25491526_25496662_25496804_25498209_25498347_25500839_25501011_25503951_25504105_25504887_25505079_25510673_25510741_25512833_25513007_25517752_25517850_25526407_25526599_25585454
H1_mix_00056210	chr20	-	3801	23	FSM	ENSG00000101004.15	ENST00000422516.5	3801	23	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_7	48.7186220272229	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGTATAG	31	False	NA	5	True	NA	NA	NA	25585517	25452825	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_25453643_25455672_25455787_25458382_25458530_25461521_25461636_25462382_25462542_25467388_25467459_25469990_25470096_25478922_25479207_25480160_25480268_25481967_25482101_25489243_25489325_25489874_25489986_25491350_25491526_25496662_25496804_25498209_25498347_25500839_25501011_25503951_25504105_25504887_25505079_25510673_25510741_25512833_25513007_25517752_25517850_25526407_25526599_25585454
H1_mix_00056211	chr20	-	4031	23	ISM	ENSG00000101004.15	ENST00000278886.11	4991	24	14	2976	0	0	5prime_fragment	FALSE	canonical	3	99	junction_17	35.7909737455255	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGATGGGCGCTGCTG	31	False	NA	NA	False	NA	NA	NA	25585517	25455672	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_-_25455787_25458382_25458530_25461521_25461636_25462382_25462542_25467388_25467459_25469990_25470096_25476042_25477090_25478922_25479207_25480160_25480268_25481967_25482101_25489243_25489325_25489874_25489986_25491350_25491526_25496662_25496804_25498209_25498347_25500839_25501011_25503951_25504105_25504887_25505079_25510673_25510741_25512833_25513007_25517752_25517850_25526407_25526599_25585454
H1_mix_00056213	chr20	-	3803	2	FSM	ENSG00000170191.5	ENST00000304788.4	3803	2	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTCTCCTCATCTCTTT	-32	True	NA	NA	False	AATAAA	-18	NA	25624014	25612934	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_25616582_25623858
H1_mix_00056214	chr20	-	3789	5	FSM	ENSG00000130684.14	ENST00000252979.6	4237	5	12	436	12	-436	multi-exon	FALSE	canonical	3	26	junction_4	8.57321409974112	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAATGCTCAGCCAATGC	4	True	NA	NA	False	NA	NA	NA	25696841	25673630	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_25677038_25685566_25685663_25685995_25686123_25686390_25686467_25696758
H1_mix_00056215	chr20	-	251	1	FSM	ENSG00000175170.16	ENST00000376404.3	456	1	409	-204	409	-181	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGGGTCCGCAGGCGGG	NA	False	NA	NA	False	NA	NA	NA	25774907	25774656	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_25774700_25774900
H1_mix_00056216	chr20	-	946	10	FSM	ENSG00000282826.3	ENST00000687441.1	1098	10	152	0	50	0	multi-exon	FALSE	canonical	3	26	junction_1	25.5217167269633	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGAGTTGTTGTGAAAT	17	True	NA	-2	True	AATAAA	-28	NA	28602664	28580631	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_28580745_28581918_28582030_28583018_28583111_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28601656_28601757_28602608
H1_mix_00056217	chr20	-	3202	8	NIC	ENSG00000282826.3	novel	976	9	NA	NA	11	0	intron_retention	FALSE	canonical	3	33	junction_6	21.1708309150268	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTGAGTTGTTGTGAAA	7	True	NA	-3	True	AATAAA	-27	NA	28602758	28580632	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_28583111_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28601656_28601757_28602608
H1_mix_00056218	chr20	-	769	9	FSM	ENSG00000282826.3	ENST00000358464.10	1025	9	180	76	50	-74	multi-exon	FALSE	canonical	3	26	junction_1	24.6421260243511	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGATTTTTGTTTCTGTC	17	True	NA	-79	True	AAAAAG	-37	NA	28602664	28580708	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_28580745_28581918_28582030_28583018_28583111_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28602608
H1_mix_00056219	chr20	-	787	8	FSM	ENSG00000282826.3	ENST00000686484.1	875	8	85	3	11	0	multi-exon	FALSE	canonical	3	49	junction_1	18.688641098872	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACGTGTGTGTATGCTTTT	7	True	NA	0	True	TATAAA	-16	NA	28602758	28583024	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_28583111_28583869_28583947_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28602608
H1_mix_00056220	chr20	-	890	9	FSM	ENSG00000282826.3	ENST00000686258.1	976	9	83	3	8	0	multi-exon	FALSE	canonical	3	33	junction_7	21.7873242964803	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACGTGTGTGTATGCTTTT	4	True	NA	0	True	TATAAA	-16	NA	28602761	28583024	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_28583111_28583869_28583947_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28601656_28601757_28602608
H1_mix_00056221	chr20	-	1538	1	FSM	ENSG00000224628.2	ENST00000445194.2	1519	1	0	-19	0	19	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCCATCTTCTCAGCAA	18	False	NA	NA	False	NA	NA	NA	31286835	31285297	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_31285300_31286800
H1_mix_00056222	chr20	-	2582	2	FSM	ENSG00000171552.14	ENST00000376062.6	2578	2	0	-4	0	4	multi-exon	FALSE	canonical	3	413	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTCTTGTGTGCTCCGGG	1345	False	NA	NA	False	AATAAA	-29	NA	31722597	31664447	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_31666087_31721654
H1_mix_00056223	chr20	-	2584	3	FSM	ENSG00000171552.14	ENST00000307677.5	2574	3	0	-10	0	4	multi-exon	FALSE	canonical	3	161	junction_2	126	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTCTTGTGTGCTCCGGG	-1	True	NA	NA	False	AATAAA	-29	NA	31722868	31664447	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_31666087_31721654_31722349_31722617
H1_mix_00056224	chr20	-	2433	3	NNC	ENSG00000171552.14	novel	2373	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	191	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAAGAGCCTGGGCT	4	True	NA	NA	False	AATAAA	-14	NA	31722549	31664462	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_31666087_31721654_31722331_31722416
H1_mix_00056226	chr20	-	2441	3	FSM	ENSG00000171552.14	ENST00000434194.2	2441	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	205	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAAGAGCCTGGGCT	-13	True	NA	NA	False	AATAAA	-14	NA	31722566	31664462	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_31666087_31721654_31722349_31722443
H1_mix_00056227	chr20	-	3212	3	FSM	ENSG00000171552.14	ENST00000676582.1	3212	3	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_2	109.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAAGAGCCTGGGCT	-10	True	NA	NA	False	AATAAA	-14	NA	31723529	31664462	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_31666087_31721654_31722331_31722617
H1_mix_00056228	chr20	-	2544	3	FSM	ENSG00000171552.14	ENST00000678563.1	2544	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	178.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAAGAGCCTGGGCT	-36	True	NA	NA	False	AATAAA	-14	NA	31723978	31664462	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_31666087_31721654_31722331_31723734
H1_mix_00056229	chr20	-	2426	3	FSM	ENSG00000171552.14	ENST00000439267.2	2426	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	187.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAAGAGCCTGGGCT	NA	False	NA	NA	False	AATAAA	-14	NA	31723989	31664462	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_31666087_31721654_31722331_31723863
H1_mix_00056231	chr20	-	1217	7	FSM	ENSG00000149599.16	ENST00000339738.10	1224	7	11	-4	11	4	multi-exon	FALSE	canonical	1	2	junction_4	2.3094010767585	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCCGAGTGCCTCCCAG	6	True	NA	-6	True	ATTAAA	-19	NA	31870516	31861072	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_31861676_31862570_31862743_31863906_31863982_31864952_31865003_31867070_31867154_31869563_31869598_31870316
H1_mix_00056232	chr20	-	1960	5	FSM	ENSG00000088356.6	ENST00000202017.6	1957	5	0	-3	0	3	multi-exon	FALSE	canonical	3	315	junction_2	31.1317763707759	145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTGTCCAGTGTGACTG	-22	True	NA	1	True	AATAAA	-29	NA	31952046	31944333	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_31945890_31946495_31946577_31948807_31948883_31950311_31950388_31951874
H1_mix_00056233	chr20	-	3964	1	FSM	ENSG00000235217.6	ENST00000565928.1	3884	1	-80	0	-80	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGATCATGTCACTTCCC	5956	False	NA	-23	True	AATAAA	-27	NA	32190440	32186476	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_32186500_32190400
H1_mix_00056235	chr20	-	6046	8	FSM	ENSG00000197183.15	ENST00000359676.9	5991	8	0	-55	0	55	multi-exon	FALSE	canonical	3	16	junction_2	10.9339389246585	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTCATCTAGTTGGGCAC	-1	True	NA	NA	False	NA	NA	NA	32483471	32443003	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_32447817_32452235_32452438_32452883_32453007_32453303_32453496_32453575_32453762_32456117_32456396_32474600_32474743_32483361
H1_mix_00056236	chr20	-	701	3	FSM	ENSG00000197183.15	ENST00000326071.8	701	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCACCTGTTTCTTTATTA	1474	False	NA	NA	False	AATAAA	-19	NA	32483582	32464779	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_32465118_32474600_32474743_32483361
H1_mix_00056237	chr20	-	636	1	FSM	ENSG00000175730.8	ENST00000317045.6	636	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCAAGGGTGCCCTTTGG	NA	False	NA	NA	False	NA	NA	NA	32690815	32690179	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_32690200_32690800
H1_mix_00056239	chr20	-	1881	9	FSM	ENSG00000149600.12	ENST00000446419.6	1343	9	-534	-4	-522	0	multi-exon	FALSE	canonical	3	103	junction_8	124.036033071039	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGGATCCAGTTGTCTT	NA	False	NA	62	True	AATAAA	-17	NA	32743989	32702698	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_32703459_32704022_32704072_32704439_32704490_32704813_32704905_32706582_32706621_32706703_32706761_32727892_32727996_32728088_32728140_32743307
H1_mix_00056240	chr20	-	2080	14	FSM	ENSG00000101391.21	ENST00000346416.7	2080	14	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_13	37.771502360014	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTCTCTCACTTTGA	1	True	NA	-15	True	ATTAAA	-21	NA	33401519	33358838	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_33359124_33360350_33360492_33366858_33367009_33370498_33370630_33372641_33372698_33374114_33374213_33379460_33379692_33385649_33385771_33387322_33387534_33392141_33392243_33394031_33394067_33395012_33395117_33396760_33397085_33401427
H1_mix_00056242	chr20	-	2211	8	FSM	ENSG00000101400.6	ENST00000217381.3	2211	8	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	6.77630927178938	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGGTCTGTGCCTTGGC	122	False	33443786	-3	True	AATAAA	-35	NA	33443763	33407956	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_33408600_33408700_33408889_33410134_33410332_33412295_33412427_33412574_33412783_33417718_33417924_33438840_33439027_33443310
H1_mix_00056243	chr20	-	2014	12	FSM	ENSG00000125967.17	ENST00000246190.11	2009	12	0	-5	0	5	multi-exon	TRUE	canonical	3	64	junction_6	19.4723792516222	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCTGTCTCGCAGGTCT	-20	True	NA	4	True	AATAAA	-23	NA	33674428	33657081	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_33657858_33657941_33658034_33658476_33658555_33658721_33658835_33659496_33659733_33659884_33660004_33660258_33660396_33669374_33669473_33669686_33669713_33670683_33670793_33672397_33672423_33674223
H1_mix_00056245	chr20	-	596	4	FSM	ENSG00000125967.17	ENST00000484824.2	596	4	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	10.2740233382816	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACCGGCCGGTGCTGGCTG	-12	True	NA	NA	False	NA	NA	NA	33674420	33669447	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_33669713_33670683_33670793_33672397_33672423_33674223
H1_mix_00056246	chr20	-	2725	7	FSM	ENSG00000101412.13	ENST00000343380.6	2690	7	0	-35	0	35	multi-exon	FALSE	canonical	0	0	junction_3	101.639340589929	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGCCTCTCCTTTCCC	5	True	NA	NA	False	NA	NA	NA	33686385	33675441	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_33676980_33677104_33677331_33677425_33677541_33678200_33678354_33679754_33679975_33680325_33680417_33686003
H1_mix_00056247	chr20	-	2709	6	NIC	ENSG00000101412.13	novel	2690	7	NA	NA	-92	-198	intron_retention	FALSE	canonical	0	0	junction_2	111.176256457933	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGGACTCTGTTGGGA	NA	False	NA	-2	True	AATAAA	-24	NA	33686477	33675674	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_33677331_33677425_33677541_33678200_33678354_33679754_33679975_33680325_33680417_33686003
H1_mix_00056248	chr20	-	957	3	FSM	ENSG00000101417.12	ENST00000344022.7	989	3	32	0	23	0	multi-exon	FALSE	canonical	1	3	junction_1	7	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGTTCTAGATTCCCAC	-19	True	NA	NA	False	TTTAAA	-38	NA	33720287	33707268	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_33707970_33714673_33714737_33720094
H1_mix_00056250	chr20	-	1466	10	NNC	ENSG00000125977.7	novel	2556	9	NA	NA	0	34927	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1354.01214503005	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAACATCTACTAAATGT	-14	True	NA	NA	False	NA	NA	NA	34112243	34053381	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_34053414_34089430_34089906_34090516_34090603_34093674_34093732_34096656_34096806_34097415_34097517_34098497_34098634_34103461_34103566_34105367_34105546_34112095
H1_mix_00056252	chr20	-	1467	10	NNC	ENSG00000125977.7	novel	2556	9	NA	NA	0	34927	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1354.01214503005	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAACATCTACTAAATGT	-14	True	NA	NA	False	NA	NA	NA	34112243	34053381	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_34053416_34089431_34089906_34090516_34090603_34093674_34093732_34096656_34096806_34097415_34097517_34098497_34098634_34103461_34103566_34105367_34105546_34112095
H1_mix_00056253	chr20	-	1512	10	NNC	ENSG00000125977.7	novel	2556	9	NA	NA	-55	34927	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1354.01214503005	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAACATCTACTAAATGT	NA	False	NA	NA	False	NA	NA	NA	34112298	34053381	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_34053417_34089442_34089906_34090516_34090603_34093674_34093732_34096656_34096806_34097415_34097517_34098497_34098634_34103461_34103566_34105367_34105546_34112095
H1_mix_00056254	chr20	-	2567	9	FSM	ENSG00000125977.7	ENST00000374980.3	2556	9	0	-11	0	11	multi-exon	FALSE	canonical	3	3441	junction_8	398.939042179379	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTTTGTGTATGTATGT	-14	True	NA	1	True	AATAAA	-37	NA	34112243	34088297	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_34089906_34090516_34090603_34093674_34093732_34096656_34096806_34097415_34097517_34098497_34098634_34103461_34103566_34105367_34105546_34112095
H1_mix_00056256	chr20	-	642	1	FSM	ENSG00000236456.1	ENST00000433096.1	585	1	12	-69	12	69	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATACATATATATATAT	NA	False	NA	NA	False	NA	NA	NA	34246525	34245883	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_34245900_34246500
H1_mix_00056257	chr20	-	2791	1	Intergenic	novelGene_797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTTGGTTTTTTAATT	NA	False	NA	-1	True	AATAAA	-19	NA	34275679	34272888	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_-_34272900_34275700
H1_mix_00056258	chr20	-	2150	10	FSM	ENSG00000101444.13	ENST00000217426.7	2150	10	0	0	0	0	multi-exon	FALSE	canonical	3	1530	junction_6	121.566117761712	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTTGAGCCTTTATTTT	-2	True	NA	-4	True	AATAAA	-18	NA	34303355	34280267	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_34281166_34285439_34285635_34290331_34290450_34290550_34290639_34290730_34290939_34291418_34291532_34292357_34292508_34294080_34294157_34295394_34295586_34303242
H1_mix_00056261	chr20	-	1639	12	FSM	ENSG00000101464.11	ENST00000217446.8	1639	12	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_9	13.3627086876529	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGAGACCACATCTGCAT	9	True	NA	-12	True	AATAAA	-22	NA	34677092	34560541	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_34560980_34575103_34575247_34581547_34581673_34585436_34585581_34588452_34588608_34616041_34616140_34634614_34634716_34637875_34637986_34644163_34644227_34645274_34645335_34657179_34657245_34676955
H1_mix_00056263	chr20	-	7292	15	FSM	ENSG00000198646.14	ENST00000359003.7	7083	15	21	-230	0	230	multi-exon	FALSE	canonical	3	31	junction_5	12.8922140718136	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAACTTAGAGATCAATG	8	True	NA	NA	False	NA	NA	NA	34825630	34714543	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_34715366_34727258_34727408_34732558_34732596_34736689_34736759_34740362_34743342_34746806_34746929_34749402_34750520_34754721_34754869_34757219_34758105_34758804_34758934_34768463_34768587_34776292_34776449_34782120_34782405_34792449_34792564_34825471
H1_mix_00056264	chr20	-	6906	14	NIC	ENSG00000198646.14	novel	7083	15	NA	NA	15	-26	combination_of_known_splicesites	FALSE	canonical	2	3	junction_13	17.8388579250749	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAAAGTTATGTTATTGG	23	True	NA	-26	True	AATAAA	-16	NA	34825615	34714800	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_34715366_34727258_34727408_34732558_34732596_34736689_34736759_34740362_34743342_34746806_34746929_34749402_34750520_34754721_34754869_34757219_34758105_34758804_34758934_34768463_34768587_34776292_34776449_34782120_34782405_34825471
H1_mix_00056265	chr20	-	2637	15	FSM	ENSG00000131067.17	ENST00000336431.10	2638	15	1	0	1	0	multi-exon	FALSE	canonical	3	62	junction_8	30.0170869706586	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGCTCTGGTTTAATTT	-14	True	NA	-5	True	ATTAAA	-18	NA	34872855	34844719	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_34845492_34849960_34850061_34851230_34851369_34852154_34852273_34852388_34852539_34854530_34854620_34854795_34854924_34856805_34856894_34859442_34859640_34859968_34860043_34860253_34860322_34861444_34861563_34862813_34862966_34863312_34863549_34872646
H1_mix_00056267	chr20	-	1496	4	ISM	ENSG00000131067.17	ENST00000336431.10	2638	15	2	15943	2	2151	5prime_fragment	FALSE	canonical	3	142	junction_3	3.74165738677394	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-13	True	NA	NA	False	NA	NA	NA	34872854	34860662	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_-_34861563_34862813_34862966_34863312_34863549_34872646
H1_mix_00056268	chr20	-	1916	14	NNC	ENSG00000100983.12	novel	1909	13	NA	NA	0	47414	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	72.0944482429516	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGGAGGAAAGAGAAGCAA	-8	True	NA	NA	False	NA	NA	NA	34955788	34881017	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_34881044_34928432_34928952_34929400_34929591_34931335_34931418_34931938_34932134_34935575_34935643_34936762_34936841_34936942_34937024_34941712_34941830_34942487_34942628_34942930_34943007_34945952_34946099_34951723_34951861_34955726
H1_mix_00056269	chr20	-	1908	13	FSM	ENSG00000100983.12	ENST00000651619.1	1909	13	0	1	0	0	multi-exon	FALSE	canonical	3	179	junction_1	36.0262250157977	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGATTCCTTACTTCGT	-26	True	NA	-3	True	AATAAA	-18	NA	34955806	34928432	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_34928952_34929400_34929591_34931335_34931418_34931938_34932134_34935575_34935643_34936762_34936841_34936942_34937024_34941712_34941830_34942487_34942628_34942930_34943007_34945952_34946099_34951723_34951861_34955726
H1_mix_00056270	chr20	-	1926	10	FSM	ENSG00000100983.12	ENST00000646512.1	1907	10	0	-19	0	0	multi-exon	FALSE	canonical	3	4	junction_4	85.1187986084344	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTAATTCTGCCTTAAAT	0	True	NA	-43	True	NA	NA	NA	34951762	34928472	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_34928952_34929400_34929591_34931335_34931418_34931938_34932134_34936762_34936841_34936942_34937024_34941712_34941830_34942487_34943007_34945952_34946099_34951723
H1_mix_00056272	chr20	-	3162	19	FSM	ENSG00000100991.12	ENST00000252015.3	3162	19	0	0	0	0	multi-exon	FALSE	canonical	3	670	junction_11	116.141264027375	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTGGACCTGGCTTTT	-7	True	NA	-15	True	AATAAA	-44	NA	35092807	35002403	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35003284_35003409_35003617_35004457_35004571_35005694_35005804_35006434_35006576_35007549_35007641_35008663_35008748_35010186_35010289_35013007_35013067_35016007_35016140_35021189_35021357_35035122_35035309_35044504_35044713_35049865_35049995_35054975_35055032_35057513_35057572_35069295_35069413_35078045_35078175_35092613
H1_mix_00056273	chr20	-	3138	19	FSM	ENSG00000100991.12	ENST00000451813.6	3138	19	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_11	168.993936628756	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTGGACCTGGCTTTT	-7	True	NA	-15	True	AATAAA	-44	NA	35092807	35002403	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35003284_35003409_35003617_35004457_35004571_35005694_35005804_35006434_35006576_35007549_35007641_35008663_35008748_35010186_35010289_35013007_35013067_35016007_35016140_35021189_35021333_35035122_35035309_35044504_35044713_35049865_35049995_35054975_35055032_35057513_35057572_35069295_35069413_35078045_35078175_35092613
H1_mix_00056275	chr20	-	1461	1	FSM	ENSG00000279253.1	ENST00000624581.1	1461	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGGCCTCGTGGGAAGG	NA	False	NA	NA	False	NA	NA	NA	35264187	35262726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35262700_35264200
H1_mix_00056276	chr20	-	1695	2	FSM	ENSG00000126005.17	ENST00000456790.2	1695	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGTACAAACCTATGAAT	-10	True	NA	-15	True	AATAAA	-21	NA	35278122	35276351	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35277933_35278008
H1_mix_00056277	chr20	-	867	2	FSM	ENSG00000126005.17	ENST00000424358.1	867	2	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGAGGGAGGCTATCTGA	-17	True	NA	NA	False	NA	NA	NA	35278129	35277149	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35277933_35278045
H1_mix_00056278	chr20	-	821	4	FSM	ENSG00000242372.9	ENST00000440766.5	798	4	0	-23	0	19	multi-exon	FALSE	canonical	3	20	junction_3	767.053380729717	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTACAATCCCTGCACTC	9	True	NA	7	True	NA	NA	NA	35284523	35278887	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35284380
H1_mix_00056279	chr20	-	1275	6	FSM	ENSG00000242372.9	ENST00000374436.7	1252	6	0	-23	0	19	multi-exon	TRUE	canonical	3	1371	junction_3	110.694895997964	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTACAATCCCTGCACTC	7708	False	NA	7	True	NA	NA	NA	35284715	35278887	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35280653_35280830_35284175_35284262_35284380
H1_mix_00056280	chr20	-	1040	5	FSM	ENSG00000242372.9	ENST00000374443.7	1017	5	0	-23	0	19	multi-exon	FALSE	canonical	3	185	junction_3	598.255380251611	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTACAATCCCTGCACTC	3	True	NA	7	True	NA	NA	NA	35284770	35278887	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35284175_35284493_35284725
H1_mix_00056281	chr20	-	955	6	FSM	ENSG00000242372.9	ENST00000447927.6	932	6	0	-23	0	19	multi-exon	FALSE	canonical	3	185	junction_3	546.285273460671	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTACAATCCCTGCACTC	7619	False	NA	7	True	NA	NA	NA	35284804	35278887	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35284175_35284262_35284380_35284493_35284725
H1_mix_00056282	chr20	-	1080	7	FSM	ENSG00000242372.9	ENST00000374450.8	1069	7	0	-11	0	0	multi-exon	FALSE	canonical	3	1248	junction_6	144.77731943306	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTGGGGCCCTCAGCCT	1	True	NA	-12	True	ATTAAA	-32	NA	35284772	35278906	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35280653_35280830_35284175_35284262_35284380_35284493_35284725
H1_mix_00056284	chr20	-	1976	7	FSM	ENSG00000101019.22	ENST00000457259.5	1987	7	0	11	0	1	multi-exon	FALSE	canonical	2	2	junction_5	84.1462021325581	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCCTGGAATGGATGGAA	1257	False	NA	-14	True	AATAAA	-21	NA	35411958	35302576	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35304070_35306665_35306780_35314687_35314766_35347163_35347273_35366556_35366615_35394091_35394197_35411939
H1_mix_00056285	chr20	-	2279	10	FSM	ENSG00000101019.22	ENST00000374385.10	2267	10	0	-12	0	0	multi-exon	TRUE	canonical	3	214	junction_1	24.4621148253456	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGATGGAAAAATTAATGGA	8	True	NA	-3	True	AATAAA	-32	NA	35411973	35302565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35304070_35306665_35306780_35314687_35314766_35347163_35347273_35366556_35366615_35374183_35374257_35381917_35382026_35384037_35384134_35394091_35394197_35411939
H1_mix_00056286	chr20	-	2078	8	FSM	ENSG00000101019.22	ENST00000374380.6	2133	8	44	11	-11	1	multi-exon	FALSE	canonical	2	3	junction_6	80.8596667955398	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCCTGGAATGGATGGAA	-6	True	NA	-14	True	AATAAA	-21	NA	35411987	35302576	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35304070_35306665_35306780_35314687_35314766_35347163_35347273_35366556_35366615_35374183_35374257_35394091_35394197_35411939
H1_mix_00056287	chr20	-	758	9	FSM	ENSG00000101019.22	ENST00000424405.5	758	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_7	73.0315642376637	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTCAGAGCATCCTGAAG	8	True	NA	NA	False	NA	NA	NA	35411973	35303990	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35304070_35306665_35306780_35314687_35314766_35347163_35347273_35366556_35366615_35374183_35374257_35381917_35382026_35394091_35394197_35411939
H1_mix_00056288	chr20	-	3638	7	FSM	ENSG00000101019.22	ENST00000397554.5	3638	7	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_1	22.573337271116	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGGAATTCTTTTTTA	7	True	NA	1	True	AATAAA	-34	NA	35411974	35344109	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35347273_35366556_35366615_35374183_35374257_35381917_35382026_35384037_35384134_35394091_35394197_35411939
H1_mix_00056290	chr20	-	3665	14	FSM	ENSG00000088340.17	ENST00000674470.1	3646	14	0	-19	0	-1	multi-exon	FALSE	canonical	2	8	junction_9	5.01359099593856	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGACCTGTGATCACGTG	NA	False	NA	-22	True	AATAAA	-12	NA	35579839	35558742	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35559053_35559155_35559257_35559340_35559628_35560122_35560639_35561851_35561938_35563853_35564919_35565099_35565228_35576166_35576284_35576380_35576519_35576595_35576697_35576785_35576829_35578835_35578968_35579055_35579115_35579257
H1_mix_00056292	chr20	-	638	2	FSM	ENSG00000214078.13	ENST00000462352.5	625	2	0	-13	0	0	multi-exon	FALSE	canonical	3	1012	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTTGTGTGTTTTTAGG	4172	False	NA	-2	True	AATAAA	-30	NA	35626853	35626030	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35626382_35626566
H1_mix_00056293	chr20	-	834	2	FSM	ENSG00000214078.13	ENST00000473373.1	821	2	0	-13	0	0	multi-exon	FALSE	canonical	3	871	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTTGTGTGTTTTTAGG	3685	False	NA	-2	True	AATAAA	-30	NA	35627340	35626030	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35626804_35627279
H1_mix_00056294	chr20	-	744	4	FSM	ENSG00000214078.13	ENST00000415920.5	731	4	0	-13	0	0	multi-exon	TRUE	canonical	3	18	junction_1	395.897573734532	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTTGTGTGTTTTTAGG	569	False	NA	-2	True	AATAAA	-30	NA	35630456	35626030	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35626382_35626562_35626804_35627279_35627414_35630438
H1_mix_00056296	chr20	-	2147	18	FSM	ENSG00000214078.13	ENST00000352393.8	2147	18	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_15	259.563834312573	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTTGTGTGTTTTTAGG	47	False	NA	-2	True	AATAAA	-30	NA	35664886	35626030	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35626382_35626566_35626804_35627279_35627414_35630438_35630491_35630740_35630796_35630900_35631035_35631113_35631174_35631267_35631355_35631491_35631579_35631687_35631778_35631944_35632026_35632162_35632235_35632310_35632386_35632516_35632697_35632794_35632924_35655201_35655345_35658929_35658983_35664759
H1_mix_00056299	chr20	-	1703	16	FSM	ENSG00000214078.13	ENST00000397442.5	1695	16	0	-8	0	0	multi-exon	FALSE	canonical	3	66	junction_1	231.755292400315	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTGAAGACCAATGCTTT	58	False	NA	-29	True	AATAAA	-3	NA	35664875	35626057	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35626382_35626734_35626804_35627279_35627414_35630438_35630491_35630740_35630796_35630900_35631035_35631113_35631174_35631267_35631355_35631491_35631579_35631687_35631778_35631944_35632026_35632162_35632235_35632310_35632386_35632516_35632697_35632794_35632924_35664801
H1_mix_00056310	chr20	-	6678	3	FSM	ENSG00000244462.8	ENST00000374114.8	6646	3	-32	0	2	0	multi-exon	FALSE	canonical	3	453	junction_2	63.5	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAGTACTTTACTGAGCT	1	True	NA	1	True	AATAAA	-32	NA	35664932	35648924	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35655345_35658929_35659015_35664759
H1_mix_00056312	chr20	-	5213	3	FSM	ENSG00000244462.8	ENST00000374104.7	5213	3	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_2	225	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAACTACTTTGTTATTT	4	True	NA	-8	True	ATTAAA	-17	NA	35664900	35650325	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35655345_35658929_35658983_35664759
H1_mix_00056314	chr20	-	3007	13	FSM	ENSG00000244005.13	ENST00000374092.9	3008	13	0	1	0	-1	multi-exon	TRUE	canonical	3	58	junction_9	33.1620599815847	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAATTTGGCTGGGTGT	-4	True	NA	NA	False	ATTAAA	-18	NA	35699352	35668052	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35669686_35672754_35672845_35673600_35673685_35674349_35674432_35674511_35674618_35675044_35675203_35680736_35680872_35681887_35681982_35690412_35690566_35696376_35696461_35697683_35697801_35698480_35698591_35699191
H1_mix_00056315	chr20	-	2632	13	FSM	ENSG00000244005.13	ENST00000374085.5	2645	13	13	0	13	0	multi-exon	FALSE	canonical	1	2	junction_12	44.7517845702517	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGATTGTGATAAGTGCTA	196	False	NA	NA	False	AATAAA	-8	NA	35699176	35668698	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35669686_35672754_35672845_35673600_35673685_35674349_35674432_35674511_35674618_35675044_35675203_35680736_35680872_35681887_35681982_35690412_35690566_35696376_35696461_35697683_35697801_35698480_35698591_35698744
H1_mix_00056316	chr20	-	3248	5	FSM	ENSG00000244005.13	ENST00000480655.5	2653	5	-595	0	-595	0	multi-exon	FALSE	canonical	3	149	junction_4	4.55521678957215	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGACTTTATGAGAGGT	NA	False	NA	-11	True	AATAAA	-17	NA	35676781	35668963	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35669686_35672754_35672845_35673600_35673685_35674349_35674432_35674511
H1_mix_00056317	chr20	-	1975	13	FSM	ENSG00000244005.13	ENST00000397425.5	1956	13	0	-19	0	0	multi-exon	FALSE	canonical	2	5	junction_12	44.1992804114376	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGACTTTATGAGAGGT	-1	True	NA	-11	True	AATAAA	-17	NA	35699349	35668963	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35669686_35672754_35672845_35673600_35673685_35674349_35674432_35674511_35674618_35675044_35675203_35680736_35680872_35681887_35681982_35690412_35690566_35696376_35696461_35697683_35697801_35698480_35698591_35699309
H1_mix_00056319	chr20	-	4604	17	FSM	ENSG00000131051.24	ENST00000253363.11	5060	17	0	456	0	-456	multi-exon	FALSE	canonical	3	745	junction_5	236.213084086699	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACAGTGAAACCCCGTCT	-20	True	NA	NA	False	NA	NA	NA	35742260	35701802	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709275_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35738967_35739018_35740823_35740888_35741940
H1_mix_00056320	chr20	-	2416	15	FSM	ENSG00000131051.24	ENST00000461283.5	2415	15	0	-1	0	0	multi-exon	FALSE	canonical	3	590	junction_5	264.412247701754	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAGATCTTCATTTTTCA	3250	False	NA	-6	True	AATAAA	-19	NA	35739037	35703608	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709257_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35738967
H1_mix_00056321	chr20	-	4580	16	FSM	ENSG00000131051.24	ENST00000463004.5	4580	16	0	0	0	0	multi-exon	FALSE	canonical	3	745	junction_5	228.999524502175	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAGATCTTCATTTTTCA	4	True	NA	-6	True	AATAAA	-19	NA	35742236	35703608	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709275_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35738967_35740888_35741940
H1_mix_00056322	chr20	-	2832	17	FSM	ENSG00000131051.24	ENST00000361162.10	2831	17	0	-1	0	0	multi-exon	FALSE	canonical	3	590	junction_5	260.330919216293	2312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAGATCTTCATTTTTCA	NA	False	NA	-6	True	AATAAA	-19	NA	35742312	35703608	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709257_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35738967_35739018_35740823_35740888_35741940
H1_mix_00056323	chr20	-	2885	18	FSM	ENSG00000131051.24	ENST00000403542.6	2883	18	0	-2	0	0	multi-exon	FALSE	canonical	3	335	junction_15	371.052118630907	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAGATCTTCATTTTTCA	13	False	NA	-6	True	AATAAA	-19	NA	35742274	35703608	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709275_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35738967_35739018_35740524_35740598_35740823_35740888_35741940
H1_mix_00056324	chr20	-	2421	16	FSM	ENSG00000131051.24	ENST00000528062.7	2421	16	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_12	392.474859775191	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGTCTTAAAATTCCAAA	2	True	NA	NA	False	NA	NA	NA	35742238	35703897	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709275_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35731940_35732136_35738967_35739018_35740823_35740888_35741940
H1_mix_00056326	chr20	-	2857	18	FSM	ENSG00000131051.24	ENST00000444878.5	2124	18	-18	-715	0	0	multi-exon	FALSE	canonical	3	335	junction_15	383.833675773035	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGGAGATCTTCATTTTT	21	False	35742287	-8	True	AATAAA	-17	NA	35742266	35703610	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709257_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35738967_35739018_35740524_35740598_35740823_35740888_35741940
H1_mix_00056333	chr20	-	1068	5	FSM	ENSG00000131051.24	ENST00000453310.5	1068	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	508.430612276641	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAGTTACTTTTTACCTT	-18	True	NA	NA	False	NA	NA	NA	35742258	35734518	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35735082_35738967_35739018_35740524_35740598_35740823_35740888_35741940
H1_mix_00056334	chr20	-	869	4	FSM	ENSG00000131051.24	ENST00000463098.5	869	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	564.443285213158	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTATTCCTGTTCCCTTT	13	True	NA	NA	False	AGTAAA	-28	NA	35742227	35739102	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35739548_35740524_35740598_35740823_35740888_35741940
H1_mix_00056335	chr20	-	771	2	FSM	ENSG00000171222.11	ENST00000305978.7	771	2	0	0	0	0	multi-exon	FALSE	canonical	3	484	junction_1	0	151	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTCTGGTGTGTCTCTT	-7	True	NA	-7	True	AATGAA	-21	NA	35954502	35953623	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35954340_35954447
H1_mix_00056336	chr20	-	5369	1	FSM	ENSG00000260032.2	ENST00000565493.2	5401	1	37	-5	37	5	mono-exon	FALSE	NA	NA	NA	NA	NA	339	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTGCTTGTAGAATAGAGT	-19	True	NA	0	True	AATAAA	-30	NA	36050981	36045612	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_36045600_36051000
H1_mix_00056338	chr20	-	443	4	ISM	ENSG00000232907.9	ENST00000425233.6	1810	7	403	17796	173	-12892	5prime_fragment	FALSE	canonical	2	6	junction_1	1.4142135623731	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGGAAAGGTCACAGAATC	411	False	NA	NA	False	NA	NA	NA	36572984	36525500	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_-_36525567_36527723_36527925_36571440_36571544_36572911
H1_mix_00056339	chr20	-	2917	15	FSM	ENSG00000101079.21	ENST00000359675.6	2917	15	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_13	52.6292384012336	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGTGTTATTTCTTTC	20	True	NA	0	True	AATAAA	-27	NA	36746067	36651765	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_36653702_36656359_36656412_36656496_36656533_36660336_36660385_36665045_36665098_36665235_36665302_36666288_36666393_36671340_36671398_36680815_36680903_36682517_36682579_36684412_36684476_36687491_36687613_36688678_36688785_36721678_36721784_36746044
H1_mix_00056340	chr20	-	2976	16	FSM	ENSG00000101079.21	ENST00000349004.6	2971	16	0	-5	0	0	multi-exon	FALSE	canonical	3	167	junction_7	18.7988179297411	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGTGTTATTTCTTTC	-3	True	NA	0	True	AATAAA	-27	NA	36746090	36651765	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_36653702_36656359_36656412_36656496_36656533_36660336_36660385_36665045_36665098_36665235_36665302_36666288_36666393_36671340_36671398_36680815_36680903_36682517_36682579_36684412_36684476_36687491_36687613_36688678_36688785_36706971_36707008_36721678_36721784_36746044
H1_mix_00056341	chr20	-	1921	11	FSM	ENSG00000149636.16	ENST00000373740.7	1922	11	0	1	0	-1	multi-exon	FALSE	canonical	3	10	junction_9	72.0108325184482	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTATGTTTTGAGTGTATA	9935	False	NA	-4	True	ATTAAA	-18	NA	36773720	36751795	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36770872_36770978_36771424_36771474_36773661
H1_mix_00056342	chr20	-	2437	11	FSM	ENSG00000149636.16	ENST00000426836.5	2441	11	0	4	0	0	multi-exon	FALSE	canonical	3	34	junction_10	65.371935874655	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTTTTGAGTGTATAA	17	True	NA	-3	True	ATTAAA	-19	NA	36773751	36751794	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36770872_36771194_36771424_36771474_36773393
H1_mix_00056343	chr20	-	2181	11	FSM	ENSG00000149636.16	ENST00000373750.9	2181	11	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_5	27.2376577553945	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTTTTGAGTGTATAA	5	True	NA	-3	True	ATTAAA	-19	NA	36773763	36751794	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36770872_36771194_36771424_36771474_36773661
H1_mix_00056344	chr20	-	14733	15	FSM	ENSG00000149639.15	ENST00000237536.9	14218	15	-502	-13	-502	13	multi-exon	FALSE	canonical	3	17	junction_2	5.72498997414682	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCCTCCTCTCTGATTT	31	False	NA	1	True	AATAAA	-28	NA	36864040	36777433	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_36786638_36793248_36794600_36796881_36796953_36797501_36797574_36802855_36803108_36804734_36804903_36805852_36805958_36808512_36808744_36809981_36810108_36812703_36812845_36815125_36816308_36817406_36817470_36829053_36829213_36839216_36839442_36862657
H1_mix_00056345	chr20	-	743	2	FSM	ENSG00000149639.15	ENST00000463491.1	802	2	0	59	0	-59	multi-exon	FALSE	canonical	3	17	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGTGAGGACCAACAGGAA	8450	False	NA	NA	False	NA	NA	NA	36839402	36828655	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_36829213_36839216
H1_mix_00056346	chr20	-	4649	16	FSM	ENSG00000101347.11	ENST00000646673.2	4649	16	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_4	21.0643458637259	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTCCATCTTGAAAGTTG	7	True	NA	-28	True	AATAAA	-15	NA	36951708	36890228	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_36893067_36897821_36897960_36898439_36898545_36904156_36904250_36905363_36905504_36911217_36911334_36912460_36912553_36916721_36916831_36916948_36917050_36919363_36919520_36927181_36927253_36930759_36930876_36935028_36935190_36941038_36941112_36946737_36946805_36951435
H1_mix_00056347	chr20	-	4508	17	FSM	ENSG00000101347.11	ENST00000642246.1	4508	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_14	53.6577333079771	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGGAAAGAGAGAAAGAAAA	1	True	NA	NA	False	AAAAAG	-34	NA	36951714	36890438	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_36893067_36897821_36897960_36898439_36898545_36904156_36904250_36905363_36905504_36911217_36911334_36912460_36912553_36916721_36916831_36916948_36917050_36919363_36919520_36927181_36927253_36930759_36930876_36935028_36935190_36935340_36935404_36941038_36941112_36946737_36946805_36951435
H1_mix_00056350	chr20	-	5686	22	FSM	ENSG00000080839.12	ENST00000373664.8	5686	22	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	6.79368788003525	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTCTGTATGACTGGA	1	True	NA	0	True	AATAAA	-29	NA	37095997	36996348	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_36998930_37003701_37003867_37007410_37007560_37018278_37018370_37020658_37020731_37022649_37022827_37032664_37032877_37035241_37035509_37040152_37040286_37044085_37044251_37047052_37047191_37055552_37055657_37056145_37056259_37061102_37061270_37062083_37062271_37065423_37065474_37066723_37066885_37066992_37067122_37067232_37067298_37067985_37068187_37088988_37089123_37095772
H1_mix_00056351	chr20	-	307	1	NIC	ENSG00000101353.15	novel	675	6	NA	NA	99	-19560	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAGTTTTTTCCAAAGAT	712	False	NA	NA	False	AGTAAA	-38	NA	37178867	37178560	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_37178600_37178900
H1_mix_00056352	chr20	-	4234	1	FSM	ENSG00000166619.15	ENST00000613961.1	4083	1	-562	411	-562	-411	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTTAAATTCTAATAGTAA	NA	False	NA	NA	False	NA	NA	NA	37504537	37500303	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_37500300_37504500
H1_mix_00056353	chr20	-	2018	2	FSM	ENSG00000166619.15	ENST00000373537.7	2018	2	0	0	0	0	multi-exon	FALSE	canonical	3	525	junction_1	0	1720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGGTTTTATGTGGCT	-2	True	NA	-8	True	AATAAA	-16	NA	37527876	37517416	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_37519351_37527792
H1_mix_00056354	chr20	-	2200	3	FSM	ENSG00000166619.15	ENST00000414542.6	2205	3	6	-1	6	0	multi-exon	FALSE	canonical	3	17	junction_2	6	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGGTTTTATGTGGCT	NA	False	NA	-8	True	AATAAA	-16	NA	37527925	37517416	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_37519351_37521318_37521452_37527792
H1_mix_00056355	chr20	-	2158	3	FSM	ENSG00000166619.15	ENST00000445723.5	588	3	-47	-1523	6	0	multi-exon	FALSE	canonical	2	4	junction_2	12.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGGTTTTATGTGGCT	NA	False	NA	-8	True	AATAAA	-16	NA	37527925	37517416	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_37519351_37521318_37521410_37527792
H1_mix_00056357	chr20	-	4376	9	FSM	ENSG00000101407.13	ENST00000373448.6	3958	9	-288	-130	-288	130	multi-exon	FALSE	canonical	3	14	junction_8	171.512208020304	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCCTCCCCATTTCCCAG	NA	False	NA	NA	False	AGTAAA	-3	NA	38033749	37982876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_37983640_37996374_37996463_37996748_37996954_37999187_37999329_38002627_38002777_38006196_38006398_38011514_38013858_38019004_38019145_38033403
H1_mix_00056359	chr20	-	3813	8	FSM	ENSG00000101407.13	ENST00000373447.8	3799	8	0	-14	0	0	multi-exon	FALSE	canonical	3	364	junction_3	37.4906791137232	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAAGTTTTTTATTTAA	-10	True	NA	0	True	AATAAA	-37	NA	38033456	37983006	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_37983640_37996374_37996463_37996748_37996954_37999187_37999329_38002627_38002777_38006196_38006398_38011514_38013858_38033403
H1_mix_00056361	chr20	-	251	1	FSM	ENSG00000101407.13	ENST00000620381.1	432	1	177	4	177	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGATTCTGTGCATGTG	NA	False	NA	NA	False	AATAAA	-12	NA	38006094	38005843	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_38005800_38006100
H1_mix_00056362	chr20	-	2196	3	FSM	ENSG00000198959.12	ENST00000469269.1	3467	3	1260	11	1260	-11	multi-exon	FALSE	canonical	2	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACACTCAAACTAGGTCTG	9689	False	NA	-8	True	AATAAA	-13	NA	38132500	38128471	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_38130370_38131092_38131230_38132339
H1_mix_00056367	chr20	-	1080	8	FSM	ENSG00000196756.14	ENST00000656320.1	1077	8	0	-3	0	0	multi-exon	FALSE	canonical	3	14	junction_5	73.5055183267882	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTTCTTAAATCAGTGAC	-8	True	NA	-10	True	AATAAA	-20	NA	38435352	38420586	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_38420901_38421005_38421099_38422091_38422242_38426418_38426504_38427679_38427767_38431040_38431113_38434503_38434627_38435196
H1_mix_00056368	chr20	-	998	7	FSM	ENSG00000196756.14	ENST00000665233.2	1026	7	29	-1	0	0	multi-exon	FALSE	canonical	3	22	junction_2	72.1997614646721	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTTCTTAAATCAGTGAC	-8	True	NA	-10	True	AATAAA	-20	NA	38435352	38420586	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_38420901_38421005_38421099_38422086_38422242_38426418_38426504_38431040_38431113_38434503_38434627_38435196
H1_mix_00056369	chr20	-	894	5	FSM	ENSG00000196756.14	ENST00000655520.2	897	5	4	-1	0	0	multi-exon	FALSE	canonical	2	9	junction_4	72.242646684628	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTTCTTAAATCAGTGAC	-12	True	NA	-10	True	AATAAA	-20	NA	38435356	38420586	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_38420901_38421005_38421099_38426418_38426504_38431040_38431113_38435026
H1_mix_00056370	chr20	-	1200	9	FSM	ENSG00000196756.14	ENST00000670051.1	1195	9	0	-5	0	0	multi-exon	FALSE	canonical	3	14	junction_3	72.9793421113126	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTTCTTAAATCAGTGAC	-14	True	NA	-10	True	AATAAA	-20	NA	38435358	38420586	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_38420901_38421005_38421099_38422091_38422242_38425934_38426049_38426418_38426504_38427679_38427767_38431040_38431113_38434503_38434627_38435196
H1_mix_00056371	chr20	-	1037	6	FSM	ENSG00000196756.14	ENST00000456953.7	1043	6	4	2	0	0	multi-exon	FALSE	canonical	3	89	junction_2	39.8376706146331	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTCTTAAATCAGTGA	-33	True	NA	-11	True	AATAAA	-19	NA	38435377	38420587	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_38420901_38421005_38421099_38426418_38426504_38431040_38431113_38434503_38434627_38435026
H1_mix_00056372	chr20	-	1187	7	FSM	ENSG00000196756.14	ENST00000666268.2	1191	7	4	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	64.8631037048199	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTCTTAAATCAGTGA	-33	True	NA	-11	True	AATAAA	-19	NA	38435377	38420587	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_38420901_38421005_38421099_38422091_38422242_38426418_38426504_38431040_38431113_38434503_38434627_38435026
H1_mix_00056374	chr20	-	1120	8	FSM	ENSG00000196756.14	ENST00000658488.2	1129	8	10	-1	-2	0	multi-exon	FALSE	canonical	3	14	junction_3	75.8804107441036	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTTCTTAAATCAGTGAC	-21	True	NA	-10	True	AATAAA	-20	NA	38435365	38420586	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_38420901_38421005_38421099_38422091_38422242_38425934_38426049_38426418_38426504_38431040_38431113_38434503_38434627_38435196
H1_mix_00056375	chr20	-	760	1	FSM	ENSG00000235408.6	ENST00000439232.2	272	1	-216	-272	-216	272	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACACTGAGTTTATGTCTC	9774	False	NA	NA	False	NA	NA	NA	38425570	38424810	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_38424800_38425600
H1_mix_00056376	chr20	-	828	1	FSM	ENSG00000223864.1	ENST00000450070.1	712	1	142	-258	142	258	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTTTAATAAAGTTAAAAAA	NA	False	NA	NA	False	AATAAA	-19	NA	38978280	38977452	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_38977500_38978300
H1_mix_00056377	chr20	-	338	1	Intergenic	novelGene_800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGCCTGGATGTCAGG	NA	False	NA	NA	False	NA	NA	NA	40095212	40094874	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_-_40094900_40095200
H1_mix_00056378	chr20	-	423	2	Antisense	novelGene_ENSG00000223410.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	33	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTAGAAAGACTCAGCGAC	3227	False	NA	NA	False	AGTAAA	-5	NA	40271131	40094992	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr20_-_40095113_40270828
H1_mix_00056379	chr20	-	3381	1	FSM	ENSG00000204103.4	ENST00000373313.3	3389	1	0	8	0	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGAGGACTCTGCGTTCGC	0	True	NA	-4	True	ATTAAA	-21	NA	40689236	40685855	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_40685900_40689200
H1_mix_00056380	chr20	-	10024	4	FSM	ENSG00000174306.22	ENST00000683867.1	10074	4	49	1	-10	-1	multi-exon	FALSE	canonical	2	5	junction_2	3.29983164553722	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCACATCTGCTGACTTA	-5	True	NA	NA	False	AATAAA	-12	NA	41317682	41178455	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_41185202_41202056_41205067_41268989_41269084_41317508
H1_mix_00056381	chr20	-	3791	4	FSM	ENSG00000183798.5	ENST00000332312.4	3791	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	0.816496580927726	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTACTTTCTTCAAAGACAG	-3	True	NA	-1	True	ATTAAA	-19	NA	41366818	41359961	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_41363055_41363637_41363862_41365034_41365158_41366467
H1_mix_00056382	chr20	-	10719	37	FSM	ENSG00000124177.16	ENST00000373233.8	10719	37	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_17	17.426034163477	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTATTTGAGGAATTC	22	True	NA	1	True	AAAAAG	-12	NA	41618377	41402082	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_41405490_41412143_41412264_41413323_41413516_41415185_41415639_41416587_41416795_41417197_41417350_41420507_41422080_41423491_41423701_41425177_41425395_41426092_41426154_41437273_41437335_41439999_41440130_41445664_41445769_41447881_41447972_41450945_41451106_41451825_41452026_41452739_41452943_41454625_41454737_41455799_41455980_41457263_41457429_41473321_41473518_41483308_41483520_41484351_41484608_41487664_41487809_41488427_41488605_41489777_41490022_41491697_41491820_41493537_41493673_41493857_41493945_41497383_41497502_41498167_41498227_41499294_41499358_41512845_41512996_41514804_41514953_41533049_41533571_41551304_41551361_41618339
H1_mix_00056383	chr20	-	2772	3	FSM	ENSG00000124177.16	ENST00000480022.1	2829	3	57	0	57	0	multi-exon	FALSE	canonical	3	111	junction_2	0.5	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTCACCTCCATAAGAACC	1627	False	NA	-35	True	CATAAA	-18	NA	41415008	41404522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_41405490_41412143_41412264_41413323
H1_mix_00056384	chr20	-	835	3	FSM	ENSG00000124177.16	ENST00000476641.2	862	3	0	27	0	-27	multi-exon	FALSE	canonical	3	57	junction_2	4.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATCAGAAATAAAGATACTA	NA	False	NA	-26	True	NA	NA	NA	41484507	41473049	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_41473518_41483308_41483520_41484351
H1_mix_00056385	chr20	-	599	3	FSM	ENSG00000124177.16	ENST00000482596.1	599	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	27.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAAGGAAAAAGGAAAA	15	True	NA	NA	False	NA	NA	NA	41618384	41514919	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_41514953_41533049_41533571_41618339
H1_mix_00056386	chr20	-	289	1	FSM	ENSG00000234271.1	ENST00000432727.1	312	1	62	-39	62	39	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTAAGAATTAAAAATCTT	NA	False	NA	NA	False	NA	NA	NA	43523510	43523221	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_43523200_43523500
H1_mix_00056387	chr20	-	455	1	FSM	ENSG00000282876.1	ENST00000635579.1	588	1	31	102	31	-102	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCTGGAAGACCCAAACTG	NA	False	NA	NA	False	NA	NA	NA	43590565	43590110	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_43590100_43590600
H1_mix_00056388	chr20	-	9312	6	FSM	ENSG00000149596.7	ENST00000372980.4	9502	6	28	162	28	-162	multi-exon	FALSE	canonical	2	4	junction_2	1.16619037896906	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATCGATGATTTTAAAAAG	15	True	NA	NA	False	NA	NA	NA	44187160	44106751	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_44113504_44114781_44114877_44115664_44116387_44118504_44118624_44159617_44160408_44186326
H1_mix_00056389	chr20	-	2109	4	FSM	ENSG00000132823.11	ENST00000255174.3	2109	4	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_2	20.4178571081514	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGCTGGCTGTGGTTGAT	16	True	NA	NA	False	AATACA	-20	NA	44210771	44195938	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_44197740_44202960_44203075_44206880_44206999_44210695
H1_mix_00056390	chr20	-	4626	2	FSM	ENSG00000197296.6	ENST00000396825.4	4628	2	0	2	0	-2	multi-exon	FALSE	canonical	3	13	junction_1	0	274	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTCAGCATTTTGTGT	-22	True	NA	NA	False	ATTAAA	-23	NA	44311202	44302841	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_44307241_44310975
H1_mix_00056391	chr20	-	363	2	Genic_Genomic	ENSG00000226243.1	novel	279	1	NA	NA	0	81504	multi-exon	FALSE	canonical	0	0	junction_1	0	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCACAGAGTTCAGCTGAA	27	False	NA	NA	False	NA	NA	NA	44466842	44385059	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr20_-_44385090_44466509
H1_mix_00056394	chr20	-	1779	11	FSM	ENSG00000132824.14	ENST00000255175.5	1726	11	0	-53	0	50	multi-exon	FALSE	canonical	3	27	junction_1	150.072282584093	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGGCTTAGAGAAGTTC	-50	True	NA	46	True	NA	NA	NA	44522085	44496170	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_44496356_44500257_44500435_44501072_44501301_44503814_44503996_44504800_44504892_44506826_44506997_44509890_44510029_44511288_44511369_44512800_44512995_44513878_44514041_44521912
H1_mix_00056395	chr20	-	4402	10	FSM	ENSG00000132824.14	ENST00000342374.5	4396	10	0	-6	0	6	multi-exon	FALSE	canonical	3	455	junction_7	33.6708834909589	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGATATTAATTTGAAGTAA	-35	True	NA	-5	True	AATAAA	-28	NA	44522070	44497434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_44500435_44501072_44501301_44503814_44503996_44504800_44504892_44506826_44506997_44509890_44510029_44511288_44511369_44512800_44512995_44513878_44514041_44521912
H1_mix_00056398	chr20	-	1356	11	FSM	ENSG00000196839.13	ENST00000536532.5	1356	11	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_3	59.1666291079693	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACTTGTACTGAAAATCT	8928	False	NA	-69	True	NA	NA	NA	44651681	44619578	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_44619848_44620298_44620402_44621017_44621148_44622828_44622931_44623006_44623079_44624201_44624330_44625568_44625685_44626455_44626600_44629046_44629170_44636226_44636289_44651574
H1_mix_00056399	chr20	-	452	3	FSM	ENSG00000244558.6	ENST00000445420.5	452	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0.5	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCACTATAATAGTCTGGT	NA	False	NA	NA	False	NA	NA	NA	44745995	44695201	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_44695508_44738819_44738935_44745964
H1_mix_00056400	chr20	-	5411	6	FSM	ENSG00000101098.13	ENST00000372851.8	5411	6	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	10.733126291999	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTCGTTCATGCTTTG	1	True	NA	-5	True	ATTAAA	-18	NA	44810546	44751807	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_44756353_44756897_44757038_44757669_44757772_44758071_44758185_44771274_44771414_44810174
H1_mix_00056402	chr20	-	1973	7	FSM	ENSG00000025772.8	ENST00000372813.4	1973	7	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_3	30.8999280833395	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTTGTTGAACAAATTT	4	True	NA	-4	True	AATAAA	-24	NA	44960397	44942129	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_44943214_44943452_44943580_44948729_44948878_44951832_44952003_44955067_44955221_44956385_44956486_44960206
H1_mix_00056403	chr20	-	1977	8	FSM	ENSG00000124159.17	ENST00000353917.10	1979	8	0	2	0	-2	multi-exon	FALSE	canonical	0	0	junction_1	7.45325569185462	296	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCCGTTTTTGGGTCTTGC	15	True	NA	-2	True	AATAAA	-19	NA	45308297	45293446	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_45293826_45293907_45294016_45297917_45298071_45298169_45298584_45300886_45301010_45304227_45304798_45305509_45305617_45308174
H1_mix_00056405	chr20	-	2617	5	FSM	ENSG00000124145.6	ENST00000372733.3	2613	5	0	-4	0	4	multi-exon	FALSE	canonical	3	174	junction_2	4.30116263352131	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTCTGTCATTTTCGTT	0	True	NA	-1	True	AATAAA	-22	NA	45348424	45325283	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_45327416_45330365_45330565_45333022_45333070_45335781_45335921_45348324
H1_mix_00056406	chr20	-	330	1	FSM	ENSG00000229900.1	ENST00000436541.1	245	1	-48	-37	-48	37	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGGAAGTGAAGGGCGGG	7507	False	NA	NA	False	GATAAA	-31	NA	45540275	45539945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_45539900_45540300
H1_mix_00056407	chr20	-	263	1	FSM	ENSG00000230860.1	ENST00000432876.1	818	1	-12	567	-12	-567	mono-exon	FALSE	NA	NA	NA	NA	NA	363	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGCTCCCAAGTACTTGG	NA	False	NA	NA	False	TATAAA	-43	NA	45568819	45568556	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_45568600_45568800
H1_mix_00056408	chr20	-	957	2	Genic_Genomic	ENSG00000235508.3	novel	885	1	NA	NA	0	43391	multi-exon	FALSE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGAATTGGGACACTTT	24	False	NA	NA	False	NA	NA	NA	45641370	45597094	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr20_-_45597120_45640438
H1_mix_00056411	chr20	-	892	5	NIC	ENSG00000101470.10	novel	681	6	NA	NA	-47	0	intron_retention	FALSE	canonical	3	29	junction_4	93.6055553906925	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTGGCCTGAATGAGGGG	5950	False	NA	3	True	AATAAA	-17	NA	45827359	45823213	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_45823380_45823990_45824407_45824494_45824639_45824782_45824835_45827245
H1_mix_00056412	chr20	-	728	6	FSM	ENSG00000101470.10	ENST00000372555.8	681	6	-47	0	-47	0	multi-exon	FALSE	canonical	3	29	junction_5	83.7233539700841	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTGGCCTGAATGAGGGG	5950	False	NA	3	True	AATAAA	-17	NA	45827359	45823213	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_45823380_45823990_45824128_45824291_45824407_45824494_45824639_45824782_45824835_45827245
H1_mix_00056413	chr20	-	1203	6	FSM	ENSG00000101473.17	ENST00000461272.5	1197	6	0	-6	0	1	multi-exon	FALSE	canonical	3	30	junction_2	118.666928838662	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGGCTTTTAATTCCCC	-4	True	NA	-12	True	AATAAA	-20	NA	45857389	45841719	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_45841957_45843526_45843773_45844262_45844421_45848449_45848676_45855158_45855293_45857187
H1_mix_00056414	chr20	-	1155	6	FSM	ENSG00000101473.17	ENST00000217455.9	1154	6	0	-1	0	1	multi-exon	FALSE	canonical	3	297	junction_4	15.9549365401433	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGGCTTTTAATTCCCC	-7	True	NA	-12	True	AATAAA	-20	NA	45857392	45841719	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_45841957_45843526_45843722_45844262_45844421_45848449_45848676_45855158_45855293_45857187
H1_mix_00056415	chr20	-	1031	5	FSM	ENSG00000101473.17	ENST00000488679.5	1013	5	0	-18	0	1	multi-exon	FALSE	canonical	3	36	junction_4	127.942369838924	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGGCTTTTAATTCCCC	-17	True	NA	-12	True	AATAAA	-20	NA	45857402	45841719	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_45841957_45843526_45843722_45844262_45844421_45848449_45848676_45857187
H1_mix_00056418	chr20	-	1268	4	FSM	ENSG00000101473.17	ENST00000484783.1	1268	4	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_2	19.4821855949366	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCGAGGGCGACATGAAGAT	-12	True	NA	NA	False	NA	NA	NA	45857397	45843722	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_45844421_45848449_45848676_45855158_45855293_45857187
H1_mix_00056420	chr20	-	816	3	FSM	ENSG00000101473.17	ENST00000426915.1	814	3	0	-2	0	0	multi-exon	FALSE	canonical	3	13	junction_1	165	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTTGTGTGCATTATCT	76	False	NA	-1	True	ATTAAA	-18	NA	45857309	45853419	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_45853980_45855158_45855293_45857187
H1_mix_00056422	chr20	-	1731	15	FSM	ENSG00000100979.15	ENST00000354050.8	1731	15	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_11	118.917052209187	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTATGGGAGACCCTG	3	True	NA	-12	True	AATAAA	-19	NA	45912152	45898620	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_45899064_45899461_45899539_45899621_45899686_45899835_45899879_45902266_45902335_45902439_45902605_45904799_45904860_45904941_45905119_45906267_45906360_45907691_45907756_45907840_45907905_45909941_45910071_45911151_45911252_45911352_45911464_45912078
H1_mix_00056424	chr20	-	1420	14	FSM	ENSG00000100979.15	ENST00000420868.2	1420	14	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_11	124.453028139205	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTAATTCCATAATCAAT	0	True	NA	-64	True	NA	NA	NA	45912155	45898805	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_45899064_45899461_45899539_45899621_45899686_45899835_45899879_45902266_45902335_45902439_45902605_45904799_45904860_45904941_45905119_45906267_45906360_45907691_45907756_45907840_45907905_45911151_45911252_45911352_45911464_45912078
H1_mix_00056425	chr20	-	4461	28	FSM	ENSG00000198026.8	ENST00000322927.3	4454	28	0	-7	0	7	multi-exon	TRUE	canonical	3	61	junction_26	11.3094640921719	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCTGCTTGCTGCTGT	-11	True	NA	0	True	AATAAA	-30	NA	45972203	45948652	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_45949081_45949169_45949252_45949332_45949399_45949484_45949569_45949799_45949878_45949965_45950070_45950218_45950374_45950452_45950596_45952146_45952522_45952597_45952710_45953688_45953949_45957585_45957681_45957834_45957929_45959200_45959434_45960207_45960369_45960448_45960526_45960615_45960733_45960863_45960883_45962069_45962183_45963472_45963651_45963737_45963991_45965627_45965775_45967493_45967635_45967733_45968028_45968284_45968363_45969450_45969692_45971209_45971461_45972121
H1_mix_00056427	chr20	-	3242	8	FSM	ENSG00000124160.12	ENST00000290231.11	3224	8	0	-18	0	18	multi-exon	TRUE	canonical	3	92	junction_1	28.5442728091658	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGGGTGTGAATATGC	-26	True	NA	-3	True	ATTAAA	-28	NA	46089962	46060972	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_46062890_46063359_46063681_46065028_46065229_46067054_46067182_46068501_46068639_46070209_46070537_46079386_46079454_46089816
H1_mix_00056428	chr20	-	727	4	FSM	ENSG00000124160.12	ENST00000372291.3	727	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	78.7753486539765	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAACCCTTAGATATTT	-16	True	NA	NA	False	NA	NA	NA	46089952	46067054	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_46067182_46068501_46068639_46070209_46070537_46089816
H1_mix_00056429	chr20	-	5672	10	FSM	ENSG00000080189.15	ENST00000543605.5	5740	10	0	68	0	-64	multi-exon	FALSE	canonical	3	42	junction_5	68.5556455969155	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCCTGGCCGGTGATCGC	5	True	NA	-66	True	NA	NA	NA	46364404	46346047	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_46350525_46350760_46350891_46352050_46352227_46354881_46354966_46355072_46355179_46355801_46355875_46356573_46356638_46357622_46357774_46358386_46358764_46364370
H1_mix_00056430	chr20	-	5756	10	FSM	ENSG00000080189.15	ENST00000372230.10	5820	10	0	64	0	-64	multi-exon	FALSE	canonical	3	194	junction_5	29.9666481275434	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCCTGGCCGGTGATCGC	-16	True	NA	-66	True	NA	NA	NA	46364425	46346047	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_46350525_46350760_46350891_46352050_46352227_46354881_46354966_46355072_46355242_46355801_46355875_46356573_46356638_46357622_46357774_46358386_46358764_46364370
H1_mix_00056431	chr20	-	2510	2	FSM	ENSG00000080189.15	ENST00000493599.1	2510	2	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTTTTAACAACTAAGAGA	9882	False	NA	NA	False	ATTAAA	-24	NA	46353197	46349527	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_46350891_46352050
H1_mix_00056433	chr20	-	2177	11	FSM	ENSG00000080189.15	ENST00000317734.12	2175	11	0	-2	0	0	multi-exon	FALSE	canonical	3	14	junction_9	73.2424057496748	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTTTTAACAACTAAGAGA	NA	False	NA	NA	False	ATTAAA	-24	NA	46364458	46349527	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_46350525_46350760_46350891_46352050_46352227_46354881_46354966_46355072_46355242_46355801_46355875_46356573_46356638_46357622_46357774_46358386_46358559_46358690_46358764_46364370
H1_mix_00056436	chr20	-	854	2	FSM	ENSG00000080189.15	ENST00000484188.1	854	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATCGGCATCACCTTCT	48	False	NA	NA	False	GGGGCT	-22	NA	46364361	46358426	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_46358959_46364039
H1_mix_00056437	chr20	-	3446	20	NNC	ENSG00000062598.18	novel	3574	21	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	81.0385838817679	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTTCCTGTTAACAGC	-1	True	NA	-14	True	AATAAA	-19	NA	46406574	46366049	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_46367561_46368890_46368969_46370442_46370526_46371351_46371460_46371578_46371692_46371805_46371970_46373398_46373536_46374331_46374441_46374535_46374641_46375235_46375371_46375667_46375791_46380252_46380304_46383415_46383495_46386125_46386276_46387337_46387438_46389038_46389221_46393092_46393144_46394048_46394090_46394404_46394504_46406547
H1_mix_00056438	chr20	-	3564	21	NNC	ENSG00000062598.18	novel	3666	22	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	67.6811642925859	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTTCCTGTTAACAGC	22	True	NA	-14	True	AATAAA	-19	NA	46406590	46366049	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_46367561_46368890_46368969_46370442_46370526_46371351_46371460_46371578_46371692_46371805_46371970_46373398_46373536_46374331_46374441_46374535_46374641_46375235_46375371_46375667_46375791_46380252_46380304_46383415_46383495_46386125_46386276_46387337_46387438_46389038_46389221_46393092_46393144_46393528_46393602_46394048_46394090_46394404_46394533_46406547
H1_mix_00056439	chr20	-	3669	22	FSM	ENSG00000062598.18	ENST00000290246.11	3666	22	0	-3	0	3	multi-exon	TRUE	canonical	3	112	junction_20	37.3412892397433	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTCCTGTTAACAGCTGT	-3	True	NA	-11	True	AATAAA	-22	NA	46406615	46366046	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_46367561_46368890_46368969_46370442_46370526_46371351_46371460_46371578_46371692_46371805_46371970_46373398_46373536_46374331_46374441_46374535_46374641_46375235_46375371_46375667_46375791_46380252_46380304_46383415_46383495_46386123_46386276_46387337_46387438_46389038_46389221_46393092_46393144_46393528_46393602_46394048_46394090_46394404_46394533_46398696_46398772_46406547
H1_mix_00056440	chr20	-	3582	21	FSM	ENSG00000062598.18	ENST00000396391.5	3574	21	0	-8	0	3	multi-exon	FALSE	canonical	3	49	junction_20	45.596573336162	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTCCTGTTAACAGCTGT	-20	True	NA	-11	True	AATAAA	-22	NA	46406632	46366046	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_46367561_46368890_46368969_46370442_46370526_46371351_46371460_46371578_46371692_46371805_46371970_46373398_46373536_46374331_46374441_46374535_46374641_46375235_46375371_46375667_46375791_46380252_46380304_46383415_46383495_46386123_46386276_46387337_46387438_46389038_46389221_46393092_46393144_46393528_46393602_46394048_46394090_46394404_46394504_46406547
H1_mix_00056441	chr20	-	2157	20	FSM	ENSG00000062598.18	ENST00000352077.6	2157	20	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_15	55.3907799561906	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGGAGCCAGAAACGACG	NA	False	NA	NA	False	NA	NA	NA	46394482	46367359	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_46367561_46368890_46368969_46370442_46370526_46371351_46371460_46371578_46371692_46371805_46371970_46373398_46373536_46374331_46374441_46374535_46374641_46375235_46375371_46375667_46375791_46380252_46380304_46383415_46383495_46386123_46386276_46387337_46387432_46389038_46389221_46393092_46393144_46393528_46393602_46394048_46394090_46394404
H1_mix_00056442	chr20	-	1250	14	FSM	ENSG00000062598.18	ENST00000488853.5	1250	14	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_7	66.3887600096681	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTGGAGAACAGTAGCCG	13	True	NA	NA	False	NA	NA	NA	46406599	46374437	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_46374441_46374535_46374641_46375235_46375371_46375667_46375791_46380252_46380304_46383415_46383495_46386123_46386276_46389038_46389221_46393092_46393144_46393528_46393602_46394048_46394090_46394404_46394533_46398696_46398772_46406547
H1_mix_00056449	chr20	-	4777	4	FSM	ENSG00000198185.12	ENST00000615481.4	3706	4	-1088	17	-1088	-15	multi-exon	FALSE	canonical	3	14	junction_3	30.6412938514171	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAAAAATACCTAATTT	2841	False	NA	-27	True	AGTAAA	-3	NA	46510710	46499646	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_46503098_46504213_46504307_46504613_46504741_46509604
H1_mix_00056450	chr20	-	3892	5	FSM	ENSG00000198185.12	ENST00000347606.8	3890	5	0	-2	0	0	multi-exon	FALSE	canonical	3	15	junction_4	30.5736814924209	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGCCAAATTTGTCT	-3	True	NA	-10	True	AGTAAA	-20	NA	46513554	46499629	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_46503098_46504213_46504307_46504613_46504741_46512081_46512141_46513409
H1_mix_00056451	chr20	-	2357	4	NNC	ENSG00000198185.12	novel	3890	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	31.5841028929991	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGAAAATATTCAACAGCAA	-3	True	NA	-23	True	AATAAA	-21	NA	46513554	46501087	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_46503098_46504213_46504307_46504613_46504723_46513409
H1_mix_00056453	chr20	-	4042	13	FSM	ENSG00000158296.14	ENST00000279027.9	4041	13	4	-5	4	0	multi-exon	TRUE	canonical	2	3	junction_12	14.5971363249402	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTCTGGTTCATTGTCC	4	True	NA	-1	True	AATAAA	-19	NA	46651455	46557822	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_46560199_46563413_46563552_46566228_46566391_46575572_46575686_46583571_46583670_46588058_46588164_46589159_46589256_46592403_46592530_46596156_46596343_46599970_46600038_46610445_46610610_46613459_46613726_46651310
H1_mix_00056457	chr20	-	2012	2	FSM	ENSG00000172315.6	ENST00000372102.3	2012	2	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTTACTGTCTTGTTTC	5	True	NA	NA	False	NA	NA	NA	46689440	46685533	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_46687232_46689126
H1_mix_00056460	chr20	-	5238	22	NNC	ENSG00000101040.20	novel	5511	24	NA	NA	-12311	0	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_7	99.3926682121527	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTCGTCCTCGAATTTG	-1	True	NA	-14	True	ATTAAA	-18	NA	47369200	47209213	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_47210898_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47238757_47239139_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298873_47310055_47310205_47347855_47347927_47369041
H1_mix_00056461	chr20	-	5313	22	NNC	ENSG00000101040.20	novel	5273	23	NA	NA	-12298	0	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_21	110.855506451676	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTCGTCCTCGAATTTG	2347	False	NA	-14	True	ATTAAA	-18	NA	47369187	47209213	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_47210898_47212641_47212726_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47238757_47239139_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298948_47310055_47310205_47369041
H1_mix_00056462	chr20	-	5120	23	NNC	ENSG00000101040.20	novel	3567	23	NA	NA	-496	-3	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_22	98.6232186465152	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGTGGTCGTCCTCGAAT	9355	False	NA	-17	True	ATTAAA	-15	NA	47348568	47209216	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_47210898_47212641_47212726_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47238895_47239139_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298873_47310055_47310205_47347855_47347927_47348470
H1_mix_00056464	chr20	-	5146	23	NNC	ENSG00000101040.20	novel	3567	23	NA	NA	-12275	-2	at_least_one_novel_splicesite	FALSE	canonical	3	218	junction_20	64.078464297897	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGTGGTCGTCCTCGAATT	2370	False	NA	-16	True	ATTAAA	-16	NA	47369164	47209215	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_47210898_47212641_47212726_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47238895_47239139_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298873_47310055_47310205_47347855_47347927_47369041
H1_mix_00056466	chr20	-	5249	23	NNC	ENSG00000101040.20	novel	3567	23	NA	NA	-12303	-2	at_least_one_novel_splicesite	FALSE	canonical	3	236	junction_20	62.1893270320094	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGTGGTCGTCCTCGAATT	2342	False	NA	-16	True	ATTAAA	-16	NA	47369192	47209215	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_47210898_47212641_47212726_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47238895_47239139_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298948_47310055_47310205_47347855_47347927_47369041
H1_mix_00056469	chr20	-	4909	21	FSM	ENSG00000196562.15	ENST00000359930.8	4915	21	0	6	0	-6	multi-exon	FALSE	canonical	3	34	junction_20	60.8823455527134	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGATTTAAAAAAAAAAAAAA	-15	True	NA	NA	False	NA	NA	NA	47786586	47656917	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_47658393_47659398_47659453_47659696_47659731_47661772_47661897_47663069_47663213_47663452_47663623_47664129_47664190_47665198_47665294_47665856_47665954_47666259_47666489_47672197_47672394_47676493_47676624_47677077_47677135_47678675_47678805_47682993_47683170_47684430_47684582_47690125_47690296_47702518_47702671_47736702_47736943_47757188_47757464_47785834
H1_mix_00056470	chr20	-	4238	21	FSM	ENSG00000196562.15	ENST00000484875.5	4238	21	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_20	65.7238731360227	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGGTGTGTCTGTTT	219	False	NA	-5	True	NA	NA	NA	47786616	47657405	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_47658393_47659398_47659453_47659696_47659731_47661772_47661897_47663069_47663213_47663452_47663623_47664129_47664190_47665198_47665294_47665856_47665954_47666259_47666489_47672197_47672394_47676493_47676624_47677077_47677135_47678675_47678805_47682993_47683170_47684430_47684582_47690125_47690296_47702518_47702671_47736702_47736943_47757188_47757464_47786047
H1_mix_00056471	chr20	-	1550	7	FSM	ENSG00000196562.15	ENST00000495544.5	1550	7	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	59.998379607749	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATTTTGTAAAAGGCCAT	5675	False	NA	-34	True	NA	NA	NA	47665259	47657434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_47658393_47659696_47659731_47661772_47661897_47663069_47663213_47663452_47663623_47664129_47664190_47665198
H1_mix_00056472	chr20	-	3787	21	FSM	ENSG00000196562.15	ENST00000688720.1	3808	21	-8	29	0	0	multi-exon	FALSE	canonical	3	165	junction_1	36.0618912426955	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATTTTGTAAAAGGCCAT	-10	True	NA	-34	True	NA	NA	NA	47785489	47657434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_47658393_47659398_47659453_47659696_47659731_47661772_47661897_47663069_47663213_47663452_47663623_47664129_47664190_47665198_47665294_47665856_47665954_47666259_47666489_47672197_47672394_47676493_47676624_47677077_47677135_47678675_47678805_47682993_47683170_47684430_47684582_47690125_47690296_47702518_47702671_47736702_47736943_47757188_47757464_47785342
H1_mix_00056474	chr20	-	6757	40	FSM	ENSG00000124126.14	ENST00000371941.4	6752	40	0	-5	0	5	multi-exon	TRUE	canonical	3	74	junction_31	15.351502827191	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGTGATCTGCTTCATC	-1	True	NA	NA	False	ATTAAA	-25	NA	48827999	48624246	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_48625928_48627547_48627616_48627860_48627964_48629448_48629622_48630727_48630795_48632276_48632392_48632495_48632640_48634675_48634776_48636462_48636684_48637710_48637753_48639765_48639895_48642167_48642259_48642406_48642490_48644408_48644498_48645850_48646058_48649299_48649577_48649995_48650207_48650893_48651056_48651395_48651584_48652585_48652707_48653360_48653498_48655289_48655376_48657039_48657189_48658135_48658229_48659918_48660062_48666282_48666356_48676192_48676269_48679359_48679410_48679650_48679755_48681234_48681336_48688656_48688805_48690946_48691097_48692671_48692791_48700752_48700887_48708259_48708422_48726289_48726392_48734545_48734651_48745024_48745148_48747808_48747881_48827641
H1_mix_00056475	chr20	-	3651	14	FSM	ENSG00000124214.21	ENST00000371856.7	3651	14	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_12	289.446114595511	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGGTCCTGTTGAGCA	5	True	NA	NA	False	AATAAA	-15	NA	49188334	49113338	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_49114894_49115781_49115868_49117125_49117249_49117776_49118097_49118332_49118409_49119981_49120129_49123091_49123236_49124374_49124588_49135832_49135932_49151581_49151748_49153932_49154072_49165996_49166286_49174194_49174270_49188115
H1_mix_00056476	chr20	-	3413	13	FSM	ENSG00000124214.21	ENST00000371828.7	3411	13	0	-2	0	0	multi-exon	FALSE	canonical	3	124	junction_8	207.41122598998	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGGTCCTGTTGAGCA	-1	True	NA	NA	False	AATAAA	-15	NA	49188367	49113338	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_49114894_49115781_49115868_49117125_49117249_49117776_49118097_49118332_49118409_49119981_49120129_49123091_49123236_49124374_49124606_49135832_49135932_49151581_49151748_49153932_49154072_49174194_49174270_49188115
H1_mix_00056477	chr20	-	3211	13	FSM	ENSG00000124214.21	ENST00000360426.8	3211	13	0	0	0	0	multi-exon	FALSE	canonical	3	637	junction_8	89.0637646109049	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGTTAATTTATTCT	-1	True	NA	-10	True	AATAAA	-14	NA	49188367	49113522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_49114894_49115781_49115868_49117125_49117249_49117776_49118097_49118332_49118409_49119981_49120129_49123091_49123236_49124374_49124588_49135832_49135932_49151581_49151748_49153932_49154072_49174194_49174270_49188115
H1_mix_00056478	chr20	-	3318	12	FSM	ENSG00000124214.21	ENST00000347458.9	3136	12	0	-182	0	0	multi-exon	FALSE	canonical	3	91	junction_11	227.402072284618	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTTTGGTCCTGTTGAG	-1	True	NA	NA	False	AATAAA	-13	NA	49188367	49113340	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_49114894_49115781_49115868_49117125_49117249_49117776_49118097_49118332_49118409_49119981_49120129_49123091_49123236_49124374_49124588_49135832_49135932_49151581_49151748_49153932_49154072_49188115
H1_mix_00056479	chr20	-	3334	14	FSM	ENSG00000124214.21	ENST00000340954.11	3334	14	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_13	287.3041396135	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGTTAATTTATTCT	-1	True	NA	-10	True	AATAAA	-14	NA	49188367	49113522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_49114894_49115781_49115868_49117125_49117249_49117776_49118097_49118332_49118409_49119981_49120129_49123091_49123236_49124374_49124588_49135832_49135932_49151581_49151748_49153932_49154072_49174194_49174270_49179121_49179245_49188115
H1_mix_00056480	chr20	-	3154	12	FSM	ENSG00000124214.21	ENST00000371802.5	3154	12	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_11	292.305512087429	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGTTAATTTATTCT	-1	True	NA	-10	True	AATAAA	-14	NA	49188367	49113522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_49114894_49115781_49115868_49117125_49117249_49117776_49118097_49118332_49118409_49119981_49120129_49123091_49123236_49124374_49124606_49135832_49135932_49151581_49151748_49153932_49154072_49188115
H1_mix_00056482	chr20	-	7543	14	FSM	ENSG00000124201.15	ENST00000371752.5	7212	14	-334	3	27	0	multi-exon	FALSE	canonical	2	7	junction_13	11.4989065597998	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGGTCCACGTGTATCC	37	True	NA	-2	True	ATTAAA	-18	NA	49278399	49245899	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_49249712_49251526_49251623_49252719_49252831_49253665_49253812_49254494_49254650_49255807_49255948_49257416_49257665_49260462_49260578_49263333_49263484_49264715_49264865_49266134_49266267_49269941_49271751_49275778_49275880_49278020
H1_mix_00056483	chr20	-	5749	10	FSM	ENSG00000124212.6	ENST00000244043.5	5570	10	-179	0	-179	0	multi-exon	FALSE	canonical	3	43	junction_5	7.67551823963135	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTCTGAGTGTGATTCT	-9	True	NA	-5	True	ATTAAA	-19	NA	49568316	49503873	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_49508065_49511027_49511180_49513079_49513262_49514226_49514396_49524057_49524240_49539569_49539722_49544304_49544449_49547840_49548020_49550065_49550190_49568042
H1_mix_00056485	chr20	-	4849	10	NNC	ENSG00000158470.5	novel	4722	9	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	95.8561164544464	32	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTGGTCATTTCTCTT	-1	True	NA	0	True	AGTAAA	-23	NA	49713873	49632944	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_49636460_49637340_49637443_49639677_49639801_49640477_49640666_49642467_49642585_49643525_49643651_49646964_49647079_49647760_49647893_49656567_49656703_49713575
H1_mix_00056488	chr20	-	252	1	FSM	ENSG00000231878.1	ENST00000414761.1	252	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGGAGGCTGAGGCGGGT	NA	False	NA	NA	False	NA	NA	NA	49729842	49729590	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_49729600_49729800
H1_mix_00056489	chr20	-	4043	3	FSM	ENSG00000158480.11	ENST00000289431.10	4043	3	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	1.5	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGTTTGGGGTTTTAT	-7	True	NA	NA	False	AATAAA	-19	NA	49915529	49903390	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_49906846_49908154_49908593_49915379
H1_mix_00056491	chr20	-	2110	4	FSM	ENSG00000244687.13	ENST00000371674.8	2110	4	0	0	0	0	multi-exon	FALSE	canonical	3	3400	junction_3	59.218990947912	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	-5	True	NA	-3	True	AATAAA	-25	NA	50113150	50081123	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_50082915_50084128_50084255_50096671_50096821_50113106
H1_mix_00056493	chr20	-	2241	5	FSM	ENSG00000244687.13	ENST00000557021.5	2258	5	17	0	-9	0	multi-exon	FALSE	canonical	1	3	junction_4	1742.85993413125	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	2768	False	NA	-3	True	AATAAA	-25	NA	50113181	50081123	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_50082915_50084128_50084255_50096671_50096821_50098881_50098982_50113106
H1_mix_00056494	chr20	-	2536	4	FSM	ENSG00000244687.13	ENST00000340309.7	2536	4	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_3	1585.38771984087	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	-5	True	NA	-3	True	AATAAA	-25	NA	50115954	50081123	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_50082915_50084128_50084255_50096671_50096821_50115484
H1_mix_00056495	chr20	-	549	4	FSM	ENSG00000244687.13	ENST00000490555.1	549	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	1629.95507777225	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCCTGCAAGAGCTTCGG	12	True	NA	-83	True	NA	NA	NA	50113133	50082856	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_50082915_50084128_50084255_50096482_50096821_50113106
H1_mix_00056500	chr20	-	1064	3	FSM	ENSG00000244687.13	ENST00000461960.5	649	3	-40	-375	0	375	multi-exon	FALSE	canonical	3	16	junction_1	1692	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTATCCTTTTTTTCC	2	True	NA	1	True	AATATA	-24	NA	50113165	50095414	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_50096271_50096671_50096821_50113106
H1_mix_00056501	chr20	-	7703	6	FSM	ENSG00000240849.11	ENST00000371652.9	7703	6	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_5	22.3571017799714	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGAGTTATTTTTTCTT	5	True	NA	0	True	AATAAA	-19	NA	50153723	50118253	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_50125180_50127974_50128188_50129545_50129691_50130855_50130948_50143501_50143622_50153516
H1_mix_00056502	chr20	-	2028	7	FSM	ENSG00000240849.11	ENST00000453505.6	2028	7	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_6	109.89957537073	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCTGAGACAGTGAATTA	-6	True	NA	NA	False	NA	NA	NA	50153734	50124043	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_50125180_50127974_50128188_50129545_50129691_50130855_50130948_50143501_50143622_50151211_50151316_50153516
H1_mix_00056503	chr20	-	813	5	FSM	ENSG00000240849.11	ENST00000371658.3	813	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	98.8774494007607	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGATGGAGAGGACATCT	88	False	NA	NA	False	NA	NA	NA	50153640	50124968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_50125180_50127974_50128188_50129545_50129691_50143501_50143622_50153516
H1_mix_00056504	chr20	-	942	2	FSM	ENSG00000237595.6	ENST00000669734.1	981	2	27	12	5	-7	multi-exon	FALSE	canonical	1	1	junction_1	0	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGCATTTCTGATCTTGT	8	True	NA	NA	False	AATAAA	-20	NA	50166189	50163341	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_50164124_50166029
H1_mix_00056505	chr20	-	4391	22	FSM	ENSG00000042062.13	ENST00000327979.8	4391	22	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	4.63937598431185	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAGACAGCAGTTGTTTC	-13	True	NA	4	True	ATTAAA	-29	NA	50691542	50586107	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_50587333_50587801_50587893_50589685_50589770_50592343_50592547_50593034_50593197_50594552_50594715_50595368_50595505_50596139_50596264_50597579_50597711_50602071_50602645_50604644_50604775_50608388_50608535_50608612_50608739_50608911_50608956_50609292_50609357_50609572_50609723_50610852_50610907_50611180_50611205_50616001_50616081_50619985_50620133_50630737_50630857_50691125
H1_mix_00056507	chr20	-	7360	3	FSM	ENSG00000101126.18	ENST00000371602.9	7360	3	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	1.5	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTTTGGTGTGTTTTGTT	3804	False	NA	1	True	NA	NA	NA	50905558	50888915	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_50894513_50902016_50902110_50903888
H1_mix_00056508	chr20	-	6664	6	FSM	ENSG00000101126.18	ENST00000621696.5	6672	6	10	-2	-6	0	multi-exon	FALSE	canonical	3	16	junction_4	55.6754883229595	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTTTGGTGTGTTTTGTT	-15	True	NA	1	True	NA	NA	NA	50931427	50888915	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_50894513_50902016_50902110_50903888_50904002_50904765_50904850_50928650_50928826_50930825
H1_mix_00056509	chr20	-	6396	5	FSM	ENSG00000101126.18	ENST00000396029.8	6396	5	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_3	37.5299880095904	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTGCTACTGTTTGCT	37	True	NA	-1	True	AATAAA	-17	NA	50931375	50889047	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_50894513_50902016_50902110_50903888_50904002_50928650_50928826_50930825
H1_mix_00056510	chr20	-	6324	4	FSM	ENSG00000101126.18	ENST00000396032.8	4979	4	-57	-1288	-41	0	multi-exon	FALSE	canonical	3	42	junction_3	47.3919824442911	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTGCTACTGTTTGCT	NA	False	NA	-1	True	AATAAA	-17	NA	50931478	50889047	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_50894513_50902016_50902110_50903888_50904002_50930825
H1_mix_00056512	chr20	-	1057	9	FSM	ENSG00000000419.14	ENST00000371588.10	1054	9	0	-3	0	0	multi-exon	FALSE	canonical	3	340	junction_8	14.3874945699382	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGCCTTCATTAGAGTA	-1	True	NA	-16	True	AATAAA	-26	NA	50958532	50934866	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_50935237_50936147_50936263_50940864_50940934_50942030_50942127_50945736_50945763_50945846_50945924_50948628_50948663_50955185_50955286_50958362
H1_mix_00056513	chr20	-	962	7	FSM	ENSG00000000419.14	ENST00000683048.1	959	7	0	-3	0	0	multi-exon	FALSE	canonical	3	20	junction_3	155.189579403888	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGCCTTCATTAGAGTA	-1	True	NA	-16	True	AATAAA	-26	NA	50958532	50934866	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_50935237_50936147_50936263_50942030_50942127_50945846_50945924_50948628_50948663_50955185_50955286_50958362
H1_mix_00056514	chr20	-	1028	8	NIC	ENSG00000000419.14	novel	1054	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_4	118.645759833761	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGCTGCCTTCATTAGA	-1	True	NA	-19	True	AATAAA	-23	NA	50958532	50934869	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_50935237_50936147_50936263_50940864_50940934_50942030_50942127_50945846_50945924_50948628_50948663_50955185_50955286_50958362
H1_mix_00056516	chr20	-	2355	5	NNC	ENSG00000026559.14	novel	967	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_4	89.6618648032707	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCTCTAATGTGGAT	31	False	NA	0	True	AATACA	-17	NA	51023094	51003655	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_51004807_51009564_51010365_51012358_51012417_51013728_51013850_51022869
H1_mix_00056517	chr20	-	1070	3	FSM	ENSG00000026559.14	ENST00000439216.5	1096	3	26	0	0	0	multi-exon	FALSE	canonical	3	100	junction_2	31.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAGCCCACGCCCCGCG	44	False	NA	NA	False	NA	NA	NA	51023081	51009564	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_51010365_51012358_51012417_51022869
H1_mix_00056518	chr20	-	1347	3	FSM	ENSG00000026559.14	ENST00000433903.5	802	3	-61	-484	-35	0	multi-exon	FALSE	canonical	3	15	junction_2	74	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAGCCCACGCCCCGCG	-17	True	NA	NA	False	NA	NA	NA	51023142	51009564	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_51010365_51012358_51012417_51022653
H1_mix_00056519	chr20	-	1186	4	FSM	ENSG00000026559.14	ENST00000424171.5	967	4	13	-232	0	0	multi-exon	FALSE	canonical	3	42	junction_3	52.6265670128269	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAGCCCACGCCCCGCG	44	False	NA	NA	False	NA	NA	NA	51023081	51009564	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_51010365_51012358_51012417_51013728_51013845_51022869
H1_mix_00056520	chr20	-	7862	28	FSM	ENSG00000054793.14	ENST00000338821.6	7862	28	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_21	9.80103854971243	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAAGCTTCATATTGTAT	-26	True	NA	NA	False	TATAAA	-19	NA	51768390	51596513	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_51601348_51604816_51605021_51607526_51607585_51608517_51608627_51610100_51610166_51613676_51613833_51617489_51617555_51618661_51618807_51618953_51619044_51622073_51622173_51625191_51625363_51627599_51627684_51628979_51629073_51639342_51639505_51656937_51657151_51669996_51670110_51671114_51671258_51674152_51674314_51676131_51676209_51689063_51689140_51690738_51690820_51694007_51694103_51696092_51696145_51697423_51697483_51712965_51713075_51725818_51725933_51729833_51729979_51768301
H1_mix_00056521	chr20	-	5323	3	ISM	ENSG00000101115.13	ENST00000217086.9	5209	4	9812	0	369	0	3prime_fragment	FALSE	canonical	3	415	junction_2	57	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGGTGTATATAAATTTT	9866	False	NA	15	True	AATAAA	-23	NA	51792709	51782330	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_-_51784685_51788860_51789142_51790021
H1_mix_00056522	chr20	-	5209	4	FSM	ENSG00000101115.13	ENST00000217086.9	5209	4	0	0	0	0	multi-exon	FALSE	canonical	3	366	junction_3	68.2853490061293	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGGTGTATATAAATTTT	0	True	NA	15	True	AATAAA	-23	NA	51802521	51782330	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_51784685_51788860_51789142_51790021_51792353_51802278
H1_mix_00056524	chr20	-	2132	5	FSM	ENSG00000020256.20	ENST00000395989.7	762	5	-119	-1251	-119	21	multi-exon	FALSE	canonical	3	18	junction_4	6.9462219947249	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGCAGCCCTCCACAGA	995	False	NA	16	True	AATAAA	-40	NA	52105042	52083989	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_52085267_52088391_52088644_52097372_52097436_52098437_52098588_52104652
H1_mix_00056526	chr20	-	3035	6	FSM	ENSG00000020256.20	ENST00000216923.5	3057	6	19	3	0	-3	multi-exon	FALSE	canonical	3	65	junction_3	4.83321838943783	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTGAATGTTAATGATTC	10	True	NA	NA	False	AATAAA	-19	NA	52191760	52151280	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_52153429_52160122_52160375_52164694_52164758_52165863_52166026_52186831_52187072_52191590
H1_mix_00056527	chr20	-	5799	6	FSM	ENSG00000171940.14	ENST00000371471.7	5790	6	0	-9	0	9	multi-exon	FALSE	canonical	3	9	junction_5	20.9284495364563	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTGTTTATTGTGTTTCT	-2	True	NA	-15	True	AATATA	-27	NA	53593839	53567061	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_53569265_53571720_53571854_53575726_53577281_53578333_53578451_53581460_53583169_53593755
H1_mix_00056528	chr20	-	5892	6	NNC	ENSG00000171940.14	novel	5790	6	NA	NA	-453	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	19.1562000407179	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGAGTTTTAGTGTTTAT	3410	False	NA	-24	True	AATATA	-18	NA	53594292	53567070	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_53569265_53571720_53571854_53575726_53577281_53578333_53578451_53581460_53583169_53594106
H1_mix_00056530	chr20	-	2443	11	NIC	ENSG00000087586.18	novel	2145	10	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_10	372.81421646713	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTGCTGTGTAAT	12	True	NA	-17	True	AATAAA	-15	NA	56392192	56369389	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56388686_56388785_56390555_56390666_56391942
H1_mix_00056532	chr20	-	2258	9	FSM	ENSG00000087586.18	ENST00000347343.6	2248	9	0	-10	0	9	multi-exon	FALSE	canonical	3	128	junction_8	267.24836295102	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTAATTCTTTCCACC	-1	True	NA	-7	True	AATAAA	-25	NA	56392205	56369379	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56391942
H1_mix_00056533	chr20	-	2043	9	FSM	ENSG00000087586.18	ENST00000395915.8	2033	9	0	-10	0	9	multi-exon	FALSE	canonical	3	274	junction_8	224.179057897922	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTAATTCTTTCCACC	-11	True	NA	-7	True	AATAAA	-25	NA	56392215	56369379	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56392167
H1_mix_00056534	chr20	-	2247	10	FSM	ENSG00000087586.18	ENST00000395914.5	2238	10	0	-9	0	9	multi-exon	FALSE	canonical	3	54	junction_9	322.81573691504	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTAATTCTTTCCACC	NA	False	NA	-7	True	AATAAA	-25	NA	56392295	56369379	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56390555_56390666_56392153
H1_mix_00056535	chr20	-	2179	9	FSM	ENSG00000087586.18	ENST00000395913.7	2169	9	0	-10	0	9	multi-exon	FALSE	canonical	3	150	junction_8	260.641516263238	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTAATTCTTTCCACC	NA	False	NA	-7	True	AATAAA	-25	NA	56392337	56369379	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56392153
H1_mix_00056540	chr20	-	813	1	FSM	ENSG00000207158.1	ENST00000384429.1	107	1	93	-799	93	799	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATCACAGAAATGGAAATAA	NA	False	NA	NA	False	CATAAA	-26	NA	56785994	56785181	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_56785200_56786000
H1_mix_00056541	chr20	-	4034	7	FSM	ENSG00000101144.13	ENST00000395863.8	4021	7	0	-13	0	13	multi-exon	FALSE	canonical	3	95	junction_5	4.32049379893857	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTCTGTGTGTGTTGTGT	2	True	NA	-2	True	AATAAA	-34	NA	57266641	57168739	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_57171109_57173199_57173311_57174930_57175008_57183721_57183920_57202474_57202624_57228228_57228422_57265704
H1_mix_00056542	chr20	-	583	1	ISM	ENSG00000124097.8	ENST00000522557.2	2110	2	6242	583	6242	-583	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGCTAAAGGAAAGCCTGA	1	True	NA	NA	False	NA	NA	NA	57489124	57488541	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_-_57488500_57489100
H1_mix_00056543	chr20	-	4954	4	FSM	ENSG00000124225.16	ENST00000341744.8	4954	4	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_3	12.675435561221	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCTTTTTCACTTCTTT	-1	True	NA	0	True	AATAAA	-19	NA	57710015	57648395	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_57652599_57653032_57653087_57659542_57659698_57709473
H1_mix_00056544	chr20	-	4688	10	FSM	ENSG00000124224.18	ENST00000497138.5	4680	10	0	-8	0	8	multi-exon	FALSE	canonical	3	11	junction_4	4.7557632353406	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGTTCCATTATTTAAGA	5833	False	NA	3	True	AATAAA	-30	NA	58246244	58228931	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_58231928_58232687_58232923_58235239_58235375_58236153_58236275_58238210_58238312_58239240_58239403_58239659_58239846_58240514_58240611_58243511_58243706_58245782
H1_mix_00056545	chr20	-	5665	19	NIC	ENSG00000124224.18	novel	5559	18	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	11	junction_4	12.6500866146452	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACTTATGTCCTGTTCCA	-5	True	NA	-7	True	AATAAA	-20	NA	58309451	58228941	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_58231928_58232687_58232923_58235239_58235375_58236153_58236275_58238210_58238312_58239240_58239403_58239659_58239846_58240514_58240611_58243511_58243706_58245782_58246253_58247321_58247507_58248114_58248274_58250886_58250953_58251756_58251865_58271362_58271506_58272768_58272876_58286313_58286447_58309225_58309271_58309418
H1_mix_00056548	chr20	-	1471	10	FSM	ENSG00000124224.18	ENST00000244070.7	1474	10	0	3	0	-3	multi-exon	FALSE	canonical	3	24	junction_1	8.0691456246068	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATGTTTCTGTGTCGTGTG	7	True	NA	NA	False	ATTAAA	-10	NA	58309439	58245748	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_58246253_58247321_58247507_58248114_58248274_58250886_58250953_58251756_58251865_58271362_58271506_58272768_58272876_58286313_58286447_58309225_58309271_58309418
H1_mix_00056551	chr20	-	1102	4	NNC	ENSG00000235590.8	novel	1156	5	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_3	8.28653526310404	42	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGAGCCTACTGTGGAT	-9	True	NA	-2	True	AATAAA	-33	NA	58850901	58818918	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_58819256_58841936_58842217_58842432_58842546_58850529
H1_mix_00056552	chr20	-	602	1	FSM	ENSG00000225806.8	ENST00000605534.1	577	1	-59	34	-36	-34	mono-exon	FALSE	NA	NA	NA	NA	NA	209	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGAGGTTCTAATAAAAT	6711	False	NA	NA	False	NA	NA	NA	58885040	58884438	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_58884400_58885000
H1_mix_00056553	chr20	-	4135	4	FSM	ENSG00000101160.15	ENST00000681457.1	7329	4	3194	0	-2028	0	multi-exon	FALSE	canonical	3	12	junction_1	2.16024689946929	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCGCTGAAGCTTTTGTTA	6196	False	NA	NA	False	AATAAA	-14	NA	59001644	58992118	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_58995760_58996638_58996802_58997602_58997754_59001464
H1_mix_00056554	chr20	-	1332	5	FSM	ENSG00000101160.15	ENST00000680206.1	1332	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.80073525436772	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGCTGCCCGTGCCTTA	8	True	NA	-22	True	AATAAA	-21	NA	59007247	58995184	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_58995760_58997602_58997754_59001464_59001645_59006321_59006486_59006985
H1_mix_00056555	chr20	-	1502	6	FSM	ENSG00000101160.15	ENST00000217131.6	1502	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	2.0976176963403	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGCTGCCCGTGCCTTA	1	True	NA	-22	True	AATAAA	-21	NA	59007254	58995184	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_58995760_58996638_58996802_58997602_58997754_59001464_59001645_59006321_59006486_59006985
H1_mix_00056556	chr20	-	3198	4	FSM	ENSG00000101160.15	ENST00000488395.2	3198	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	1.69967317119759	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGCTGCCCGTGCCTTA	570	False	NA	-22	True	AATAAA	-21	NA	59007270	58995184	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_58997754_59001464_59001645_59006321_59006486_59006985
H1_mix_00056557	chr20	-	3648	3	FSM	ENSG00000124172.10	ENST00000243997.8	3610	3	-35	-3	-25	3	multi-exon	FALSE	canonical	3	5224	junction_2	81.5	513	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTAGTTTTGCTTGTCTTT	2520	False	NA	NA	False	AATAAA	-19	NA	59032370	59025471	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_59028842_59030302_59030430_59032219
H1_mix_00056558	chr20	-	2508	6	FSM	ENSG00000101166.16	ENST00000355937.9	2503	6	0	-5	0	5	multi-exon	TRUE	canonical	3	456	junction_3	45.8798430686069	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTGATTATAATTTCTTT	29	True	NA	0	True	AATAAA	-23	NA	59042786	59033139	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_59035127_59036470_59036574_59036689_59036761_59037190_59037281_59038465_59038635_59042698
H1_mix_00056559	chr20	-	943	5	FSM	ENSG00000101166.16	ENST00000371033.9	943	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	219.265107803316	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGACGCCCATTGCCCTG	10	True	NA	NA	False	NA	NA	NA	59042805	59034633	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_59035127_59036470_59036574_59036689_59036761_59038465_59038635_59042698
H1_mix_00056562	chr20	-	4276	15	FSM	ENSG00000130699.20	ENST00000252996.9	4699	15	423	0	423	0	multi-exon	FALSE	canonical	3	10	junction_14	7.62380803664362	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTGCCTATTTTTCC	410	False	NA	-1	True	ATTAAA	-17	NA	62065458	61974797	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_61976336_61997549_61997670_61998135_61998193_61998982_61999109_62000123_62000255_62000551_62000722_62003159_62003275_62003730_62003879_62006509_62006759_62007546_62007637_62009051_62009175_62010045_62010166_62012814_62012935_62014546_62014708_62064450
H1_mix_00056563	chr20	-	4652	16	NNC	ENSG00000130699.20	novel	4699	15	NA	NA	-28	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_15	9.35806247752885	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTGCCTATTTTTCC	NA	False	NA	-1	True	ATTAAA	-17	NA	62065909	61974797	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_61976336_61997549_61997670_61998135_61998193_61998982_61999109_62000123_62000255_62000551_62000722_62003159_62003275_62003730_62003879_62006509_62006759_62007546_62007637_62009051_62009175_62010045_62010166_62012814_62012935_62014546_62014708_62064450_62065459_62065533
H1_mix_00056565	chr20	-	962	7	FSM	ENSG00000101182.15	ENST00000370873.9	962	7	0	0	0	0	multi-exon	TRUE	canonical	3	4570	junction_4	619.713912489734	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTTTTTTTTTTAAGAG	28	True	NA	-22	True	AATAAA	-16	NA	62143394	62136732	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_62136950_62137363_62137427_62138170_62138291_62139074_62139198_62139780_62139906_62140817_62140945_62143207
H1_mix_00056567	chr20	-	2692	3	FSM	ENSG00000101180.17	ENST00000340177.10	2692	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	13.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGAGGACTTTGTGGGG	-1	True	NA	-2	True	AATAAA	-24	NA	62220278	62214959	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_62216927_62218490_62218658_62219720
H1_mix_00056569	chr20	-	11426	80	FSM	ENSG00000130702.15	ENST00000252999.7	11426	80	0	0	0	0	multi-exon	TRUE	canonical	3	68	junction_52	143.587889929037	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAATGAATGTTGACTTAA	0	True	NA	67	True	ATTAAA	-18	NA	62367312	62309064	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_62309476_62309715_62309836_62309987_62310082_62310177_62310312_62310418_62310573_62310664_62310830_62310901_62311095_62311161_62311308_62311400_62311537_62311613_62311785_62311919_62312051_62312172_62312317_62312399_62312533_62312631_62312781_62312887_62313011_62313087_62313251_62313326_62313461_62313648_62313803_62314303_62314441_62314554_62314726_62314798_62314948_62315027_62315208_62315947_62316059_62316670_62316774_62316881_62317024_62317344_62317500_62317661_62317779_62318453_62318651_62318842_62319014_62319683_62319796_62320558_62320670_62320738_62320891_62322018_62322169_62322268_62322450_62322657_62322759_62323455_62323671_62323775_62323857_62324079_62324205_62324440_62324555_62325315_62325547_62326676_62326761_62326864_62326967_62327232_62327407_62327528_62327670_62327865_62328011_62328240_62328446_62328843_62329056_62329137_62329254_62329776_62329917_62330487_62330615_62330742_62330945_62331031_62331130_62332371_62332481_62332556_62332718_62333089_62333244_62333374_62333482_62333563_62333707_62333900_62334040_62334185_62334343_62334521_62334622_62335020_62335127_62335216_62335270_62336339_62336446_62336733_62336787_62337589_62337728_62337803_62337939_62338015_62338151_62338231_62338370_62338467_62338609_62345817_62345878_62346080_62346216_62346505_62346597_62346681_62346801_62346912_62347029_62351703_62351802_62351908_62352080_62352241_62352361_62353133_62353252_62362399_62362553_62366948
H1_mix_00056570	chr20	-	780	4	FSM	ENSG00000130702.15	ENST00000495695.1	780	4	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_3	36.5270067514739	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCATTTTTAATTGTGAG	NA	False	NA	-13	True	AATAAA	-33	NA	62310412	62309144	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_62309476_62309715_62309836_62309987_62310082_62310177
H1_mix_00056578	chr20	-	3793	10	FSM	ENSG00000149679.12	ENST00000279101.10	3783	10	0	-10	0	10	multi-exon	FALSE	canonical	3	91	junction_8	11.049831013735	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGTCTCCTTTCAACTA	11	True	NA	2	True	TTTAAA	-25	NA	62407285	62388623	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_62391112_62391248_62391454_62392388_62392496_62392919_62393024_62393439_62393606_62394156_62394266_62394936_62395015_62396314_62396408_62396520_62396593_62406914
H1_mix_00056579	chr20	-	3805	1	FSM	ENSG00000275437.1	ENST00000616512.1	3700	1	-107	2	-107	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCTGTCTGTGAGCATG	6683	False	NA	NA	False	AATAAA	-12	NA	62406042	62402237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_62402200_62406000
H1_mix_00056581	chr20	-	265	1	FSM	ENSG00000174403.17	ENST00000621644.1	460	1	347	-152	347	152	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGCCCAGCATCACTGTGC	5199	False	NA	NA	False	NA	NA	NA	62546328	62546063	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_62546100_62546300
H1_mix_00056582	chr20	-	1317	2	Antisense	novelGene_ENSG00000060491.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGGGCTTCCTTCCTCCTCC	NA	False	NA	NA	False	NA	NA	NA	62814001	62812564	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr20_-_62813321_62813440
H1_mix_00056583	chr20	-	2625	6	FSM	ENSG00000101190.13	ENST00000335351.8	2625	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	22.2405035914208	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTTGTACACAACCTTT	-22	True	NA	93	True	NA	NA	NA	62861822	62841004	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_62842098_62854015_62854158_62857394_62857639_62859363_62859527_62860124_62860309_62861023
H1_mix_00056584	chr20	-	2259	6	NNC	ENSG00000101190.13	novel	2625	6	NA	NA	613	-6349	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_3	32.9399453551459	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAATGTTTTGGCTTTGTG	698	False	NA	-3	True	AATAAA	-23	NA	62861150	62851486	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_62852889_62854015_62854158_62857394_62857636_62859363_62859527_62860124_62860309_62861023
H1_mix_00056585	chr20	-	2874	6	NNC	ENSG00000101190.13	novel	2625	6	NA	NA	0	-6350	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	27.1926460646992	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTAATGTTTTGGCTTTGT	85	False	NA	-4	True	AATAAA	-22	NA	62861763	62851487	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_62852889_62854015_62854158_62857394_62857639_62859363_62859527_62860124_62860309_62861023
H1_mix_00056586	chr20	-	2300	6	NNC	ENSG00000101190.13	novel	2625	6	NA	NA	406	-6352	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	33.0236279048805	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTAATGTTTTGGCTTT	491	False	NA	-6	True	AATAAA	-20	NA	62861357	62851489	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_62852723_62854015_62854158_62857394_62857639_62859363_62859527_62860124_62860309_62861023
H1_mix_00056588	chr20	-	8574	16	FSM	ENSG00000101191.17	ENST00000266070.8	8574	16	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	83.1687975678913	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCGGGTCTTCATCAGC	-2	True	NA	-9	True	AATAAA	-18	NA	62937952	62877737	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_62882415_62890959_62891156_62891986_62892077_62892808_62892963_62893665_62894195_62894412_62894549_62894809_62894915_62895048_62895166_62896232_62896393_62896530_62896997_62905886_62906101_62907146_62907360_62909698_62910021_62910773_62911615_62914209_62914407_62937795
H1_mix_00056589	chr20	-	7793	15	NNC	ENSG00000101191.17	novel	7551	15	NA	NA	-440	1	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_14	88.2738087210609	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCCTTGTTTGTTTGAAT	NA	False	NA	-3	True	AATAAA	-17	NA	62926945	62887212	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_62891156_62891986_62892077_62892808_62892963_62893665_62894195_62894412_62894549_62894809_62894915_62895048_62895166_62896232_62896393_62896530_62896997_62905886_62906101_62907146_62907360_62909698_62910021_62910773_62911615_62914209_62914407_62926639
H1_mix_00056590	chr20	-	7397	6	FSM	ENSG00000101191.17	ENST00000354665.8	2707	6	-115	-4575	-79	4568	multi-exon	FALSE	canonical	3	99	junction_5	68.5145240076876	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGGCCAGAGGCGCTGTA	NA	False	NA	NA	False	NA	NA	NA	62926584	62900429	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_62906101_62907146_62907360_62909698_62910021_62910773_62911615_62914209_62914407_62926431
H1_mix_00056591	chr20	-	2833	6	FSM	ENSG00000101191.17	ENST00000370371.8	2833	6	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_5	62.8700246540432	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTCTGTCTATAGTGCA	-2	True	NA	-11	True	TATAAA	-24	NA	62937952	62904997	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_62906101_62907146_62907360_62909698_62910021_62910773_62911615_62914209_62914407_62937795
H1_mix_00056592	chr20	-	2890	6	NNC	ENSG00000101191.17	novel	2704	6	NA	NA	-353	0	intron_retention	FALSE	canonical	3	22	junction_5	98.1557945309394	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGCCTTCTGTCTATA	NA	False	NA	-16	True	TATAAA	-19	NA	62926858	62905002	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_62906101_62907146_62907360_62909698_62910021_62910773_62911615_62914209_62914407_62926639
H1_mix_00056593	chr20	-	315	1	FSM	ENSG00000125533.6	ENST00000612929.2	1038	1	990	-267	990	267	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCGGGCGCACGAAAGGTG	1200	False	NA	NA	False	NA	NA	NA	63005974	63005659	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_63005700_63006000
H1_mix_00056594	chr20	-	563	1	FSM	ENSG00000125533.6	ENST00000612929.2	1038	1	83	392	83	-340	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTCTCCAAGATCGCCAC	293	False	NA	NA	False	NA	NA	NA	63006881	63006318	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_63006300_63006900
H1_mix_00056598	chr20	-	1377	6	NIC	ENSG00000101198.15	novel	1353	7	NA	NA	-106	3	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	25.873538606074	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGTGGAAGATGCCGAG	NA	False	NA	-2	True	AATAAA	-21	NA	63254569	63240780	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_63241507_63244023_63244085_63247577_63247776_63248814_63248896_63249934_63250073_63254396
H1_mix_00056600	chr20	-	873	5	FSM	ENSG00000101198.15	ENST00000486495.5	872	5	0	-1	0	1	multi-exon	FALSE	canonical	3	4	junction_4	32.6218868246458	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGATTAGCAGAGGTCCTA	1046	False	NA	NA	False	NA	NA	NA	63253437	63243848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_63244085_63247577_63247776_63248814_63248896_63249934_63250073_63253217
H1_mix_00056603	chr20	-	8995	15	FSM	ENSG00000075043.20	ENST00000360480.7	2775	15	0	-6220	0	-10	multi-exon	FALSE	canonical	3	12	junction_2	373.579978050216	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTGATTCAACCTGGACG	9696	False	NA	-18	True	AGTAAA	-3	NA	63472505	63400225	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_63407376_63408412_63408537_63413449_63413582_63414087_63414194_63414902_63415127_63424176_63424207_63428366_63428436_63433808_63433904_63438624_63438721_63439597_63439709_63442405_63442532_63444658_63444835_63445237_63445365_63446746_63446838_63472167
H1_mix_00056606	chr20	-	1445	8	FSM	ENSG00000075043.20	ENST00000344425.8	1441	8	0	-4	0	4	multi-exon	FALSE	canonical	3	698	junction_5	65.1804402863188	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGGTTTATTTCGAG	-21	True	NA	85	True	TTTAAA	-24	NA	63472655	63433673	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_63433904_63438624_63438721_63439597_63439709_63442405_63442532_63444658_63444835_63445237_63445365_63446746_63446838_63472167
H1_mix_00056607	chr20	-	2107	8	FSM	ENSG00000101210.13	ENST00000217182.6	1773	8	-330	-4	-174	3	multi-exon	TRUE	canonical	3	67	junction_7	23.5007598661344	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGCGCCTGCTGCTGGG	-11	False	NA	0	True	AATAAA	-18	NA	63499413	63488009	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_63488426_63488917_63489153_63490478_63490736_63493136_63493288_63494804_63495102_63495855_63496036_63497619_63497835_63499057
H1_mix_00056608	chr20	-	1844	4	FSM	ENSG00000130589.16	ENST00000370082.1	1827	4	6	-23	6	10	multi-exon	FALSE	canonical	2	2	junction_2	3.09120616516523	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCAGGCATGGTGGTGG	3	True	NA	NA	False	NA	NA	NA	63574233	63570115	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_63570612_63570684_63570869_63572107_63573222_63574183
H1_mix_00056609	chr20	-	4286	10	FSM	ENSG00000101216.11	ENST00000370077.2	4280	10	0	-6	0	3	multi-exon	FALSE	canonical	3	61	junction_4	9.54521404218424	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTATCTCTTGGAATGA	-21	True	NA	-5	True	AATAAA	-20	NA	63627101	63587598	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_63590730_63592021_63592145_63592532_63592671_63593010_63593083_63595609_63595768_63597756_63597861_63602964_63603093_63604742_63604841_63619266_63619455_63626955
H1_mix_00056610	chr20	-	4273	10	NNC	ENSG00000101216.11	novel	4280	10	NA	NA	75	-1	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_7	24.3543795336514	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGAGTGTCTATCTCTT	8429	False	NA	-12	True	AATAAA	-13	NA	63627026	63587605	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_63590730_63592021_63592145_63592532_63592671_63593010_63593083_63595609_63595768_63597756_63597861_63602964_63603162_63604742_63604841_63619266_63619455_63626955
H1_mix_00056611	chr20	-	2114	3	NNC	ENSG00000197457.10	novel	2248	5	NA	NA	9758	0	at_least_one_novel_splicesite	FALSE	canonical	3	187	junction_2	45.5	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTGAACTGTCTGTGT	14	False	NA	-8	True	AATAAA	-18	NA	63642636	63639711	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_63641398_63642107_63642300_63642400
H1_mix_00056612	chr20	-	2248	5	FSM	ENSG00000197457.10	ENST00000370053.3	2248	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	102.851835180516	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTGAACTGTCTGTGT	-2	True	NA	-8	True	AATAAA	-18	NA	63653424	63639711	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_63641398_63642107_63642300_63643755_63643932_63644213_63644310_63653326
H1_mix_00056613	chr20	-	2967	7	FSM	ENSG00000101246.20	ENST00000612256.4	2974	7	0	7	0	-2	multi-exon	TRUE	canonical	3	213	junction_1	30.0259147330361	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTCATTTCTTCTATTTA	335	False	NA	NA	False	TATAAA	-15	NA	63707658	63698648	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_63700531_63700601_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998
H1_mix_00056615	chr20	-	2516	8	FSM	ENSG00000101246.20	ENST00000622789.5	2518	8	0	2	0	-2	multi-exon	FALSE	canonical	3	54	junction_7	73.7889986822603	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTCATTTCTTCTATTTA	17	True	NA	NA	False	TATAAA	-15	NA	63707976	63698648	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_63700531_63700601_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707098_63707866
H1_mix_00056616	chr20	-	1639	8	NIC	ENSG00000101246.20	novel	1623	8	NA	NA	5	0	intron_retention	FALSE	canonical	3	139	junction_7	47.5750749353276	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGTGTTACTGGGCTGC	-12	True	NA	-2	True	NA	NA	NA	63707911	63699455	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_63700531_63700601_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707093_63707866
H1_mix_00056617	chr20	-	1720	7	FSM	ENSG00000101246.20	ENST00000612157.4	1698	7	0	-22	0	0	multi-exon	FALSE	canonical	3	54	junction_6	79.6145226841323	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGTGTTACTGGGCTGC	-17	True	NA	-2	True	NA	NA	NA	63707916	63699455	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707098_63707866
H1_mix_00056618	chr20	-	1761	8	FSM	ENSG00000101246.20	ENST00000618838.4	1623	8	-138	0	0	0	multi-exon	FALSE	canonical	3	58	junction_7	72.4943347540245	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGTGTTACTGGGCTGC	17	True	NA	-2	True	NA	NA	NA	63707976	63699455	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_63700531_63700601_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707093_63707809
H1_mix_00056620	chr20	-	873	7	NIC	ENSG00000101246.20	novel	1698	7	NA	NA	0	-244	intron_retention	FALSE	canonical	3	139	junction_6	50.5799696849784	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTATGTCTGGAAAAGCG	-17	True	NA	-25	True	NA	NA	NA	63707916	63700297	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707093_63707866
H1_mix_00056623	chr20	-	2172	6	NIC	ENSG00000130584.12	novel	2335	7	NA	NA	-1	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	37.9610326519182	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTAGATTACATTTCACA	0	True	NA	5	True	AATAAA	-24	NA	63831245	63744519	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_63744682_63746871_63747302_63752685_63752862_63775677_63775963_63789820_63790791_63831096
H1_mix_00056624	chr20	-	3849	1	FSM	ENSG00000268858.2	ENST00000601296.2	3082	1	-770	3	-770	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGCTGCCTAGGCTGGTC	7	True	NA	-10	True	ATTAAA	-17	NA	63865063	63861214	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_63861200_63865100
H1_mix_00056625	chr20	-	1790	14	NIC	ENSG00000198276.16	novel	1838	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_7	198.184511482901	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGATTGGTTACAGCAC	18	True	NA	NA	False	AATAAA	-21	NA	63956385	63939828	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_63940056_63940149_63940307_63940377_63940486_63940593_63940717_63940793_63940857_63940949_63941044_63941109_63941209_63944396_63944459_63944544_63944735_63945650_63945723_63945804_63945976_63946160_63946268_63946452_63946644_63956259
H1_mix_00056626	chr20	-	1787	14	NNC	ENSG00000198276.16	novel	1838	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_7	204.251874905389	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGATTGGTTACAGCAC	18	True	NA	NA	False	AATAAA	-21	NA	63956385	63939828	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_63940056_63940149_63940307_63940377_63940486_63940593_63940717_63940793_63940857_63940949_63941044_63941109_63941209_63944396_63944459_63944544_63944735_63945650_63945723_63945804_63945976_63946160_63946268_63946452_63946641_63956259
H1_mix_00056627	chr20	-	888	5	FSM	ENSG00000198276.16	ENST00000430743.1	888	5	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_4	83.7869321553188	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGAGCCCTGGGTAGG	9880	False	NA	NA	False	NA	NA	NA	63941609	63940377	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_63940486_63940593_63940717_63940793_63940857_63940949_63941044_63941109
H1_mix_00056630	chr20	-	5982	17	FSM	ENSG00000196700.9	ENST00000369888.6	5982	17	0	0	0	0	multi-exon	TRUE	canonical	3	53	junction_16	11.3660679216693	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTTTTGTGCGGCTCAGT	-16	True	NA	-3	True	AATAAA	-21	NA	63969930	63956703	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_63960140_63961308_63961408_63961941_63962005_63962272_63962375_63962586_63962782_63963094_63963266_63963341_63963441_63963617_63963711_63963788_63963914_63964070_63964218_63964319_63964392_63964489_63964717_63966140_63966782_63966875_63967005_63967380_63967524_63967829_63967953_63969813
H1_mix_00056631	chr20	-	2448	6	NNC	ENSG00000130590.14	novel	2178	5	NA	NA	-29	-1	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_5	13.5558105622644	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGCGGTGCTGGGTCTG	NA	False	NA	-7	True	AATAAA	-14	NA	63980037	63974116	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_63975533_63975691_63975833_63976970_63977143_63977224_63977407_63979376_63979850_63979973
H1_mix_00056634	chr20	-	1699	2	FSM	ENSG00000203883.7	ENST00000340356.9	1862	2	11	152	11	-152	multi-exon	FALSE	canonical	3	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCCAAGAAGTTTCAGTG	992	False	NA	-9	True	ATTAAA	-13	NA	64049628	64047733	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_64048963_64049158
H1_mix_00056635	chr20	-	1912	6	FSM	ENSG00000171700.14	ENST00000395042.2	1619	6	-293	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	29.654004788561	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTACTCATTTTTGTCC	5137	False	NA	-6	True	TTTAAA	-6	NA	64079811	64073180	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_64074045_64074143_64074379_64074466_64074542_64076524_64076647_64076856_64076955_64079293
H1_mix_00056636	chr20	-	1511	6	FSM	ENSG00000171700.14	ENST00000332298.9	1510	6	0	-1	0	1	multi-exon	FALSE	canonical	3	28	junction_5	35.4423475520457	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTACTCATTTTTGTCCA	4960	False	NA	-5	True	TTTAAA	-7	NA	64079988	64073179	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_64074045_64074143_64074379_64074466_64074542_64076524_64076647_64076856_64076955_64079872
H1_mix_00056637	chr20	+	271	1	Intergenic	novelGene_773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCCTTGTAGCTTTTAT	3290	False	NA	NA	False	NA	NA	NA	1900117	1900388	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_1900100_1900400
H1_mix_00056638	chr20	+	305	1	Intergenic	novelGene_774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACTACTCCAGACAGACCT	1751	False	NA	NA	False	NA	NA	NA	4015791	4016096	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_4015800_4016100
H1_mix_00056639	chr20	+	1245	1	Intergenic	novelGene_777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	182	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGACTTGTGAGCCACTT	NA	False	NA	NA	False	AAGAAA	-36	NA	8710501	8711746	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_8710500_8711700
H1_mix_00056640	chr20	+	299	1	Intergenic	novelGene_779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAATGGGCTATACCCTG	NA	False	NA	NA	False	AATAAA	-21	NA	12341057	12341356	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_12341100_12341400
H1_mix_00056641	chr20	+	997	1	Intergenic	novelGene_780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCCGTCAATACCCACAAC	NA	False	NA	NA	False	NA	NA	NA	12342348	12343345	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_12342300_12343300
H1_mix_00056642	chr20	+	820	1	Intergenic	novelGene_781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	330	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGGGTGCAGAGATAAGAG	NA	False	NA	NA	False	NA	NA	NA	12344013	12344833	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_12344000_12344800
H1_mix_00056644	chr20	+	397	1	Intergenic	novelGene_806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCGGGAACCAAAACCTGAA	NA	False	NA	NA	False	NA	NA	NA	50911574	50911971	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_50911600_50912000
H1_mix_00056646	chr20	+	542	1	Intergenic	novelGene_807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCTATACCATTTTACAT	6250	False	NA	NA	False	AATATA	-11	NA	55490850	55491392	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_55490800_55491400
H1_mix_00056647	chr20	+	4375	1	Intergenic	novelGene_808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTTTTGTAAGGCACA	NA	False	NA	NA	False	AAAAAG	-1	NA	62900433	62904808	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_62900400_62904800
H1_mix_00056649	chr20	+	3278	1	FSM	ENSG00000177732.9	ENST00000342665.5	4673	1	-99	1494	-99	-1494	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCCTGTGGTTCTGCAT	23	False	NA	29	True	AATAAA	-17	NA	325452	328730	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_325500_328700
H1_mix_00056652	chr20	+	1021	4	FSM	ENSG00000101255.12	ENST00000449710.5	1070	4	49	0	-2	0	multi-exon	FALSE	canonical	1	3	junction_1	47.5417944783558	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCGCCGCGGGGCCTACG	2	True	NA	NA	False	NA	NA	NA	381294	396428	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_381501_388010_388302_391286_391580_396197
H1_mix_00056653	chr20	+	1494	1	NIC	ENSG00000125898.13	novel	1807	2	NA	NA	-502	-162	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCACCCTGGGGTCGGGGC	3356	False	NA	NA	False	NA	NA	NA	844621	846115	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_844600_846100
H1_mix_00056655	chr20	+	4030	4	FSM	ENSG00000125818.18	ENST00000484891.1	4030	4	0	0	0	0	multi-exon	FALSE	canonical	3	596	junction_1	27.3617738216415	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTGGTGAAGTGCCAT	6	True	NA	14	True	AATAAA	-20	NA	1134839	1168378	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_1135307_1163129_1163184_1164317_1164477_1165028
H1_mix_00056656	chr20	+	1114	1	FSM	ENSG00000215388.3	ENST00000431775.1	1114	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGACTACAAGCAGATGTG	NA	False	NA	NA	False	NA	NA	NA	1160583	1161697	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_1160600_1161700
H1_mix_00056657	chr20	+	5370	4	FSM	ENSG00000101298.15	ENST00000614659.1	5354	4	-16	0	-16	0	multi-exon	FALSE	canonical	3	14	junction_1	1.4142135623731	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCCCTTGGCCTGTTTTC	NA	False	NA	11	True	ATTAAA	-16	NA	1295757	1309325	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_1296422_1297144_1297253_1300561_1300712_1304877
H1_mix_00056658	chr20	+	3998	9	FSM	ENSG00000198053.12	ENST00000356025.7	3867	9	-134	3	-134	0	multi-exon	FALSE	canonical	2	7	junction_1	10.8678137175791	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTCCGGTGTTCAGTAT	28	False	NA	NA	False	AATAAA	-20	NA	1894648	1939894	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_1894797_1895438_1895527_1915098_1915456_1921394_1921713_1922312_1922646_1924763_1924878_1927874_1927900_1934714_1934755_1937319
H1_mix_00056661	chr20	+	2980	1	FSM	ENSG00000101361.17	ENST00000612233.1	2980	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGTTCATGTTCTTTAT	1198	False	NA	13	True	AATAAA	-15	NA	2655412	2658392	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_2655400_2658400
H1_mix_00056662	chr20	+	1647	3	FSM	ENSG00000088881.21	ENST00000477287.1	1647	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	0.5	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGAGTTTGCTTTTCTT	NA	False	NA	25	True	AATAAA	-44	NA	2755087	2760101	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_2755825_2758908_2758985_2759267
H1_mix_00056663	chr20	+	2711	23	NIC	ENSG00000215305.10	novel	2708	24	NA	NA	3	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_13	36.2353418639869	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTTGTCTTACACAGT	-1	True	NA	22	True	AATAAA	-15	NA	2840705	2866732	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_2840828_2859718_2859808_2860053_2860152_2860238_2860368_2860448_2860594_2860747_2860864_2860969_2861093_2861224_2861281_2861614_2861705_2861804_2861900_2862053_2862131_2862578_2862711_2862806_2862935_2863289_2863399_2863948_2864084_2864178_2864288_2864364_2864463_2864546_2864655_2864977_2865056_2865147_2865318_2865398_2865496_2866211_2866316_2866429
H1_mix_00056667	chr20	+	372	3	FSM	ENSG00000101405.3	ENST00000217386.2	513	3	120	21	120	-21	multi-exon	FALSE	canonical	1	1	junction_1	1	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCAGGTTTTTCTCCTCT	118	False	NA	-18	True	AATAAA	-3	NA	3071739	3072496	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_3071776_3072076_3072279_3072362
H1_mix_00056668	chr20	+	2177	8	FSM	ENSG00000125877.13	ENST00000455664.6	729	8	-1206	-242	-561	0	multi-exon	FALSE	canonical	3	30	junction_1	276.856332005299	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCCCAGGCAGGTGTC	4229	False	NA	21	True	AATAAA	-21	NA	3208306	3223860	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_3209567_3213168_3213227_3213318_3213384_3213984_3214059_3215280_3215313_3218516_3218633_3221840_3221918_3223365
H1_mix_00056669	chr20	+	670	2	FSM	ENSG00000125877.13	ENST00000472295.1	670	2	0	0	0	0	multi-exon	FALSE	canonical	3	941	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGTGTCTGTCTCAGTC	NA	False	NA	31	True	AATAAA	-31	NA	3221752	3223870	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_3221918_3223365
H1_mix_00056671	chr20	+	1957	16	FSM	ENSG00000101224.18	ENST00000467519.5	1960	16	3	0	3	0	multi-exon	FALSE	canonical	3	26	junction_1	21.0664556951461	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCTTGTTTCCTTGTTA	-50	True	NA	24	True	NA	NA	NA	3795741	3805237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_3795880_3797621_3797750_3798411_3798464_3800287_3800330_3800461_3800499_3800742_3800866_3800970_3801094_3801253_3801389_3801721_3801803_3801923_3802101_3802280_3802377_3802909_3802973_3803107_3803207_3803403_3803538_3804568_3804681_3804820
H1_mix_00056672	chr20	+	889	6	NIC	ENSG00000125779.24	novel	4815	7	NA	NA	26	-35	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	152.210380723524	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTCCAAGGGGCAGTTGAA	82	False	NA	NA	False	NA	NA	NA	3888864	3918754	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_3888905_3907925_3908136_3910576_3910831_3912457_3912635_3916926_3917051_3918670
H1_mix_00056673	chr20	+	1882	5	NIC	ENSG00000125779.24	novel	8484	7	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	142.865977405399	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGGGACATGGATTTCT	-20	True	NA	NA	False	AATGAA	-1	NA	3889381	3917050	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_3889729_3907925_3908906_3910576_3910831_3912457_3912635_3916926
H1_mix_00056674	chr20	+	1608	7	NNC	ENSG00000125779.24	novel	1843	7	NA	NA	95	88	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	123.402345556674	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCATTACTCTGGTTT	82	False	NA	-60	True	NA	NA	NA	3889483	3923719	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_3889729_3907925_3908136_3910580_3910831_3912457_3912635_3916926_3917051_3918670_3918797_3923243
H1_mix_00056675	chr20	+	1763	7	FSM	ENSG00000125779.24	ENST00000621507.1	1763	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	119.609666090255	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCACGTTACTTTACACT	0	True	NA	-31	True	NA	NA	NA	3889815	3923855	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_3889933_3907925_3908279_3910576_3910831_3912457_3912635_3916926_3917051_3918670_3918797_3923243
H1_mix_00056677	chr20	+	273	1	FSM	ENSG00000199024.1	ENST00000362154.1	78	1	14	-209	14	209	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAGTAATTAAACATTTGT	NA	False	NA	NA	False	ATTAAA	-18	NA	3917507	3917780	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_3917500_3917800
H1_mix_00056678	chr20	+	229	1	FSM	ENSG00000252096.1	ENST00000516287.1	135	1	-188	94	-188	-94	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCACTACAGGGGAGAGC	NA	False	NA	NA	False	NA	NA	NA	4868795	4869024	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_4868800_4869000
H1_mix_00056679	chr20	+	2705	11	FSM	ENSG00000101290.14	ENST00000468817.5	2706	11	-1	2	0	-2	multi-exon	FALSE	canonical	3	8	junction_2	119.505857597023	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCAAAAAAAAAAAAAAAAAG	-17	True	NA	NA	False	NA	NA	NA	5127007	5187877	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_5127150_5128149_5128751_5173522_5173660_5175182_5175280_5176647_5176746_5178816_5178957_5182386_5182446_5183060_5183144_5184857_5184946_5185757_5185827_5186686
H1_mix_00056680	chr20	+	1083	1	FSM	ENSG00000233578.1	ENST00000422311.1	642	1	-224	-217	-224	217	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCACTGCACTCCAACC	NA	False	NA	NA	False	NA	NA	NA	5548615	5549698	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_5548600_5549700
H1_mix_00056681	chr20	+	730	2	FSM	ENSG00000089199.10	ENST00000488832.1	2030	2	239	1061	239	-1061	multi-exon	FALSE	canonical	3	21	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGTCCCACACGGCAG	4227	False	NA	NA	False	NA	NA	NA	5915736	5916919	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_5916373_5916825
H1_mix_00056682	chr20	+	524	1	FSM	ENSG00000275632.1	ENST00000619201.1	524	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAGTACTGGTTTAATTT	NA	False	NA	14	True	AATAAA	-14	NA	6000417	6000941	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_6000400_6000900
H1_mix_00056683	chr20	+	3859	6	FSM	ENSG00000088766.12	ENST00000452938.5	3859	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	291.144362816799	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATTAAAATCTAGAAATA	-3	True	NA	NA	False	AATAAA	-12	NA	6006092	6040043	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_6006553_6009774_6009913_6015360_6015491_6032011_6032081_6034463_6034556_6037073
H1_mix_00056684	chr20	+	644	8	FSM	ENSG00000088766.12	ENST00000489345.5	644	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	349.129822062025	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTGACAGCATTTATCT	2527	False	NA	NA	False	NA	NA	NA	6009778	6034523	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_6009913_6015360_6015491_6023379_6023423_6026170_6026239_6028671_6028726_6031284_6031371_6032011_6032081_6034463
H1_mix_00056685	chr20	+	1455	1	FSM	ENSG00000234241.1	ENST00000434910.1	1683	1	29	199	29	-199	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGGTGGTAGAGGAGCAA	148	False	NA	NA	False	NA	NA	NA	6213727	6215182	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_6213700_6215200
H1_mix_00056686	chr20	+	6570	30	FSM	ENSG00000182621.18	ENST00000612075.4	6576	30	6	0	6	0	multi-exon	FALSE	canonical	1	3	junction_29	7.41515624998238	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACCCAGCGGTTATTTCT	NA	False	NA	1	True	AATAAA	-12	NA	8628293	8884896	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_8628432_8646101_8646182_8647899_8647954_8649373_8649450_8657183_8657285_8658537_8658705_8684931_8685079_8697625_8697784_8708669_8708753_8716263_8716349_8717670_8717849_8722353_8722422_8724655_8724753_8727308_8727394_8729049_8729175_8733237_8733393_8737027_8737193_8739260_8739361_8740343_8740449_8741463_8741574_8757045_8757179_8760406_8760461_8765138_8765359_8774538_8774720_8788448_8788526_8788632_8788723_8789517_8789576_8790174_8790262_8802055_8802174_8881621
H1_mix_00056687	chr20	+	6452	29	FSM	ENSG00000182621.18	ENST00000617005.4	6458	29	6	0	6	0	multi-exon	FALSE	canonical	0	0	junction_28	7.44606456801312	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACCCAGCGGTTATTTCT	NA	False	NA	1	True	AATAAA	-12	NA	8628293	8884896	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_8628432_8646101_8646182_8647899_8647954_8649373_8649450_8657183_8657285_8658537_8658705_8684931_8685079_8697625_8697784_8708669_8708753_8716263_8716349_8717670_8717849_8722353_8722422_8724655_8724753_8727308_8727394_8729049_8729175_8733237_8733393_8737027_8737193_8739260_8739361_8740343_8740449_8741463_8741574_8757045_8757179_8760406_8760461_8765138_8765359_8774538_8774720_8788448_8788526_8788632_8788723_8789517_8789576_8790174_8790262_8881621
H1_mix_00056690	chr20	+	5417	11	FSM	ENSG00000132623.16	ENST00000378392.6	5429	11	12	0	12	0	multi-exon	FALSE	canonical	3	12	junction_1	19.7911596426283	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTGTTAATTGATTATGC	3	True	NA	14	True	AATACA	-20	NA	10034998	10058303	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_10035334_10035578_10035643_10038257_10038648_10043121_10043322_10044393_10044544_10045573_10045698_10049389_10050213_10051662_10051890_10053111_10053276_10054461_10054600_10055501
H1_mix_00056691	chr20	+	844	1	FSM	ENSG00000235698.1	ENST00000414718.1	1200	1	12	344	12	-344	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGAGAAGAAGGCTCCGA	NA	False	NA	NA	False	NA	NA	NA	12380067	12380911	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_12380100_12380900
H1_mix_00056692	chr20	+	5166	3	Intergenic	novelGene_782	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	33	junction_2	178	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATTACCTTCTTGTGTTT	145	False	NA	8	True	AATAAA	-16	NA	12754168	12765634	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_12756426_12760245_12760364_12762843
H1_mix_00056693	chr20	+	867	3	Intergenic	novelGene_786	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	61	junction_2	7	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTGAGCGATTCATTAAC	158	False	NA	NA	False	ATTAAA	-38	NA	12754181	12760970	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_12754423_12760245_12760364_12760462
H1_mix_00056694	chr20	+	4143	2	Intergenic	novelGene_793	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	17	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATACATACTGCATGATTC	NA	False	NA	46	True	NA	NA	NA	13357878	13362691	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_13358479_13359148
H1_mix_00056695	chr20	+	2409	12	FSM	ENSG00000101247.18	ENST00000378081.9	2409	12	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_8	44.9109311363858	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGCGTTTTGTTTTTTGG	NA	False	NA	NA	False	AGTAAA	-15	NA	13785006	13818421	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_13785291_13787311_13787353_13788588_13788653_13793179_13793228_13794837_13794942_13798460_13798501_13801485_13801684_13808841_13808903_13814417_13814516_13816462_13816547_13816874_13816958_13817117
H1_mix_00056696	chr20	+	1190	12	NIC	ENSG00000101247.18	novel	2409	12	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_8	51.8711053501652	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTCCAGAATTTTCATC	-6	True	NA	10	True	AATAAA	-18	NA	13785052	13817228	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_13785291_13787311_13787353_13788588_13788653_13793159_13793228_13794837_13794942_13798460_13798501_13801485_13801684_13808841_13808903_13814417_13814516_13816462_13816547_13816874_13816958_13817117
H1_mix_00056697	chr20	+	904	9	NIC	ENSG00000101247.18	novel	991	10	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	70.0660402762993	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTCCAGAATTTTCATC	-6	True	NA	10	True	AATAAA	-18	NA	13785052	13817228	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_13785291_13787311_13787353_13788588_13788653_13793159_13793228_13798460_13798501_13801485_13801684_13808841_13808903_13816874_13816958_13817117
H1_mix_00056698	chr20	+	920	9	NIC	ENSG00000101247.18	novel	991	10	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_3	55.1802444267874	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTCCAGAATTTTCATC	-6	True	NA	10	True	AATAAA	-18	NA	13785052	13817228	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_13785291_13787311_13787353_13788588_13788653_13798460_13798501_13801485_13801684_13808841_13808903_13816462_13816547_13816874_13816958_13817117
H1_mix_00056699	chr20	+	676	8	FSM	ENSG00000101247.18	ENST00000481249.5	676	8	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	59.7487938568381	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTAATTTTACAAAACAAGC	29	True	NA	NA	False	NA	NA	NA	13785087	13814438	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_13785291_13787311_13787353_13788588_13788653_13793179_13793228_13798460_13798501_13801485_13801684_13808841_13808903_13814417
H1_mix_00056700	chr20	+	827	9	ISM	ENSG00000101247.18	ENST00000378081.9	2409	12	8173	1193	0	0	3prime_fragment	FALSE	canonical	3	43	junction_5	48.4972615206261	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTCCAGAATTTTCATC	8121	False	NA	10	True	AATAAA	-18	NA	13793179	13817228	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_+_13793228_13794837_13794942_13798460_13798501_13801485_13801684_13808841_13808903_13814417_13814516_13816462_13816547_13816874_13816958_13817117
H1_mix_00056701	chr20	+	497	1	FSM	ENSG00000213950.2	ENST00000430953.1	494	1	-3	0	-3	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGAGAGGGTTATTTTG	NA	False	NA	NA	False	NA	NA	NA	14757559	14758056	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_14757600_14758100
H1_mix_00056702	chr20	+	353	1	FSM	ENSG00000275728.1	ENST00000616301.1	365	1	65	-53	65	53	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTCAAGTTCCCTTTCC	5016	False	NA	NA	False	CATAAA	-21	NA	16580322	16580675	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_16580300_16580700
H1_mix_00056703	chr20	+	1974	3	NIC	ENSG00000125871.14	novel	2231	5	NA	NA	-230	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_2	99.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGTTTTGTTTACTTT	243	False	NA	13	True	AATAAA	-22	NA	17969800	17991122	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_17970371_17975683_17975904_17989938
H1_mix_00056705	chr20	+	2648	7	FSM	ENSG00000125846.16	ENST00000377671.7	2701	7	48	5	-2	0	multi-exon	FALSE	canonical	3	8	junction_2	13.5246688191122	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAACTGTGCCTGTGTCCC	-13	True	NA	12	True	AATAAA	-20	NA	18288524	18316991	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_18288605_18297984_18298063_18298288_18298465_18305007_18305179_18305680_18305808_18306297_18306394_18315071
H1_mix_00056707	chr20	+	2656	7	FSM	ENSG00000125846.16	ENST00000425686.3	2654	7	-2	0	-2	0	multi-exon	FALSE	canonical	3	8	junction_2	14.0880169726694	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCCTGTGTCCCTCATT	-13	True	NA	17	True	AATAAA	-25	NA	18288524	18316996	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_18288605_18297984_18298063_18298288_18298465_18305007_18305179_18305680_18305808_18306297_18306394_18315068
H1_mix_00056709	chr20	+	2680	20	FSM	ENSG00000101310.17	ENST00000643747.1	2680	20	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	181.729197943098	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGAAATAAATCTAGATG	-27	True	NA	-2	True	NA	NA	NA	18507889	18561055	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_18507991_18510821_18511057_18512224_18512283_18515649_18515737_18524486_18524670_18524934_18525021_18525787_18525933_18526372_18526532_18527495_18527612_18530679_18530804_18532663_18532745_18535652_18535743_18542295_18542403_18543018_18543173_18545955_18546034_18548608_18548771_18551088_18551176_18554234_18554391_18555107_18555174_18560650
H1_mix_00056710	chr20	+	3351	20	FSM	ENSG00000101310.17	ENST00000377465.6	3351	20	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	167.142515532748	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTATTTTTATTTTTA	23	True	NA	NA	False	AATATA	-19	NA	18507939	18561415	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_18508298_18510821_18511057_18512224_18512283_18515649_18515737_18524432_18524670_18524934_18525021_18525787_18525933_18526372_18526532_18527495_18527612_18530679_18530804_18532663_18532745_18535652_18535743_18542295_18542403_18543018_18543173_18545955_18546034_18548608_18548771_18551088_18551176_18554234_18554391_18555107_18555174_18560650
H1_mix_00056711	chr20	+	1278	7	NNC	ENSG00000125821.13	novel	3953	6	NA	NA	0	168	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	237.953368447592	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCTGTCTTCTGCAGA	-1	True	NA	NA	False	AAAAAG	-44	NA	18588053	18766812	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_18588116_18593730_18593822_18596005_18596242_18628126_18628234_18744099_18744272_18763359_18763893_18766735
H1_mix_00056712	chr20	+	920	5	FSM	ENSG00000173418.12	ENST00000310450.8	920	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	284.946924882512	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCTGAAGTTTGTTAG	-29	True	NA	32	True	TATAAA	-35	NA	20017309	20033629	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_20017450_20022455_20022481_20025676_20025768_20026783_20026920_20033101
H1_mix_00056713	chr20	+	1074	6	FSM	ENSG00000173418.12	ENST00000463154.5	1036	6	-38	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	284.530771622333	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCTGAAGTTTGTTAG	-29	True	NA	32	True	TATAAA	-35	NA	20017309	20033629	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_20017450_20022455_20022481_20025668_20025768_20026783_20026920_20032507_20032654_20033101
H1_mix_00056714	chr20	+	658	1	FSM	ENSG00000280229.1	ENST00000623641.1	1967	1	1247	62	1247	-62	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTCATTTACGCTAGCA	379	False	NA	NA	False	NA	NA	NA	20364937	20365595	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_20364900_20365600
H1_mix_00056716	chr20	+	293	1	FSM	ENSG00000286444.1	ENST00000671041.1	1011	1	-21	739	-21	-739	mono-exon	FALSE	NA	NA	NA	NA	NA	2805	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGCCCTACCTGCCGTCCT	NA	False	NA	NA	False	NA	NA	NA	24992290	24992583	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_24992300_24992600
H1_mix_00056717	chr20	+	2731	14	FSM	ENSG00000197586.13	ENST00000354989.9	2708	14	-23	0	-23	0	multi-exon	TRUE	canonical	3	95	junction_1	72.3440988543866	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	0	True	NA	36	True	AATAAA	-29	NA	25195669	25226729	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_25195868_25207075_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25221231_25221334_25222837_25222979_25224100_25224158_25225204_25225318_25225498
H1_mix_00056718	chr20	+	2778	15	FSM	ENSG00000197586.13	ENST00000360031.6	2766	15	-12	0	-4	0	multi-exon	FALSE	canonical	3	67	junction_2	78.61648059032	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	-35	True	NA	36	True	AATAAA	-29	NA	25195688	25226729	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_25195868_25206521_25206591_25207078_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25221231_25221334_25222837_25222979_25224100_25224158_25225204_25225318_25225498
H1_mix_00056721	chr20	+	2557	14	NNC	ENSG00000197586.13	novel	2708	14	NA	NA	5	-15	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	126.798960292902	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCCTTCTCTGGGATTC	17	True	NA	21	True	AATAAA	-14	NA	25195740	25226714	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_25195868_25209848_25209926_25210002_25210194_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25221231_25221334_25222837_25222979_25224100_25224158_25225161_25225318_25225498
H1_mix_00056723	chr20	+	2528	13	NIC	ENSG00000197586.13	novel	2766	15	NA	NA	0	-15	combination_of_known_splicesites	FALSE	canonical	2	9	junction_9	106.8561793045	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCCTTCTCTGGGATTC	33	True	NA	21	True	AATAAA	-14	NA	25195756	25226714	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_25195868_25206521_25206591_25207078_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25222837_25222979_25224100_25224158_25225204_25225318_25225498
H1_mix_00056724	chr20	+	2801	16	NNC	ENSG00000197586.13	novel	2766	15	NA	NA	-5	-15	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	120.465762771005	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCCTTCTCTGGGATTC	46	False	NA	21	True	AATAAA	-14	NA	25195769	25226714	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_25195868_25196178_25196255_25206521_25206591_25207078_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25221231_25221334_25222837_25222979_25224100_25224158_25225161_25225318_25225498
H1_mix_00056727	chr20	+	2103	1	FSM	ENSG00000277938.1	ENST00000613361.1	2784	1	591	90	591	-90	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAATGATAATCCACCACC	NA	False	NA	-76	True	AAAACA	-40	NA	25229740	25231843	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_25229700_25231800
H1_mix_00056729	chr20	+	746	5	NIC	ENSG00000213742.7	novel	650	5	NA	NA	16	283	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	8.5841423566947	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGTCTGACTTACTGGT	-6	True	NA	NA	False	NA	NA	NA	25624074	25675185	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_25624136_25634048_25634171_25645530_25645649_25673851_25674008_25674896
H1_mix_00056730	chr20	+	1021	1	FSM	ENSG00000278383.1	ENST00000611460.1	466	1	-556	1	-556	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	191	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCAGTCTATGATATTTC	NA	False	NA	5	True	AATAAA	-17	NA	25680224	25681245	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_25680200_25681200
H1_mix_00056731	chr20	+	912	1	FSM	ENSG00000230772.1	ENST00000431580.1	830	1	5	-87	5	87	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACTGAGTTTAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	25734268	25735180	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_25734300_25735200
H1_mix_00056732	chr20	+	3208	8	NNC	ENSG00000149531.15	novel	761	9	NA	NA	-192	7342	at_least_one_novel_splicesite	FALSE	non_canonical	2	24	junction_1	42.5004201659903	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTTCTTTGATTATGAC	-21	True	NA	26	True	AATAAA	-42	NA	30377179	30406599	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_30377426_30379584_30379652_30388452_30388579_30391196_30391309_30393550_30393656_30396861_30396954_30397934_30398045_30404249
H1_mix_00056733	chr20	+	1835	13	FSM	ENSG00000101294.18	ENST00000335574.10	1827	13	-8	0	-8	0	multi-exon	TRUE	canonical	2	13	junction_11	330.473145656345	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTCTGTTTAAGCACCC	NA	False	NA	48	True	ATTAAA	-42	NA	31514401	31569567	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_31514735_31527483_31527583_31538178_31538262_31544946_31545036_31549028_31549115_31549206_31549333_31550063_31550122_31554745_31554830_31559610_31559648_31561633_31561737_31566209_31566296_31568077_31568281_31569119
H1_mix_00056734	chr20	+	699	6	FSM	ENSG00000101294.18	ENST00000496438.5	699	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	360.999390581203	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACAACCTTTTTGGCCTGG	26	True	NA	NA	False	NA	NA	NA	31514501	31549217	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_31514735_31527483_31527583_31538178_31538360_31544946_31545036_31549028_31549115_31549206
H1_mix_00056735	chr20	+	866	9	FSM	ENSG00000101294.18	ENST00000344042.5	847	9	-19	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	288.624945864005	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGGTGGGCAGGACGGT	26	True	NA	NA	False	NA	NA	NA	31514501	31561730	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_31514735_31527483_31527583_31538178_31538262_31544946_31545036_31549028_31549115_31550063_31550122_31554745_31554830_31559610_31559648_31561633
H1_mix_00056736	chr20	+	919	9	FSM	ENSG00000101294.18	ENST00000487964.5	902	9	-17	0	-17	0	multi-exon	FALSE	canonical	3	15	junction_1	402.360845510594	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTGACAGAGATGTTCAG	4812	False	NA	NA	False	NA	NA	NA	31547364	31566275	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_31547607_31548676_31548794_31549028_31549115_31549206_31549333_31550063_31550122_31554745_31554830_31559610_31559648_31561633_31561737_31566209
H1_mix_00056737	chr20	+	855	2	FSM	ENSG00000101294.18	ENST00000464508.1	855	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAATTATGAATTTGACAC	3	True	NA	NA	False	NA	NA	NA	31547405	31549033	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_31547607_31548379
H1_mix_00056738	chr20	+	925	6	FSM	ENSG00000101294.18	ENST00000464661.5	906	6	-19	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	446.887636884262	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGTGAGCCTGCTGGTGT	43	False	NA	NA	False	NA	NA	NA	31547445	31554825	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_31547607_31548379_31548794_31549028_31549115_31549206_31549333_31550063_31550122_31554745
H1_mix_00056739	chr20	+	2788	9	FSM	ENSG00000101294.18	ENST00000649583.1	2788	9	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_7	392.551250634869	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGCGGGCCACTGTGCTC	43	False	NA	22	True	ATTAAA	-16	NA	31547445	31569541	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_31549115_31549206_31549333_31550063_31550122_31554745_31554830_31559610_31559648_31561633_31561737_31566209_31566296_31568077_31568281_31569119
H1_mix_00056743	chr20	+	474	1	FSM	ENSG00000278276.1	ENST00000611296.1	325	1	-250	101	-250	-101	mono-exon	FALSE	NA	NA	NA	NA	NA	290	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATTGGAACTAGACAGA	7223	False	NA	NA	False	AATAAA	-36	NA	31580639	31581113	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_31580600_31581100
H1_mix_00056744	chr20	+	685	1	FSM	ENSG00000281376.1	ENST00000629058.1	1903	1	157	1061	157	-1061	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTCAGGAAAAAAAAATAAT	NA	False	NA	NA	False	NA	NA	NA	31721663	31722348	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_31721700_31722300
H1_mix_00056745	chr20	+	1389	1	FSM	ENSG00000278012.1	ENST00000616850.1	651	1	-745	7	-745	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTACTGGTTGCCTTTT	331	False	NA	1	True	ATTAAA	-16	NA	31969435	31970824	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_31969400_31970800
H1_mix_00056746	chr20	+	2314	6	ISM	ENSG00000101331.17	ENST00000452892.3	2599	10	8307	0	8295	0	3prime_fragment	FALSE	canonical	3	32	junction_3	6.78232998312527	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTATGACTCAGTTTAC	8302	False	NA	11	True	AATAAA	-23	NA	32018744	32032180	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_+_32019410_32022659_32022796_32025855_32025920_32028994_32029125_32029699_32029839_32031000
H1_mix_00056747	chr20	+	1321	6	ISM	ENSG00000101336.18	ENST00000262651.4	2160	14	32058	-1	32012	1	3prime_fragment	FALSE	canonical	2	2	junction_1	6.1773780845922	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAACGTTGGTTTTCCTG	318	False	NA	11	True	AATAAA	-24	NA	32084299	32101850	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_+_32084544_32086627_32086808_32088567_32088645_32093862_32094017_32099003_32099136_32101316
H1_mix_00056748	chr20	+	765	1	FSM	ENSG00000275576.1	ENST00000611964.1	459	1	-314	8	-314	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGTTTCCTGTGGCTAA	6131	False	NA	NA	False	AATAAA	-9	NA	32115856	32116621	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_32115900_32116600
H1_mix_00056749	chr20	+	7063	12	NIC	ENSG00000171456.21	novel	7052	13	NA	NA	-12	1	intron_retention	FALSE	canonical	3	28	junction_6	17.4535984591589	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGTCTCAGTCATCTGT	-17	True	NA	17	True	AATAAA	-17	NA	32358317	32439320	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_32358833_32366383_32366467_32369014_32369124_32428127_32428249_32428324_32428423_32429337_32429432_32429900_32430054_32431320_32431485_32431582_32431680_32432879_32432986_32433283_32433918_32434431
H1_mix_00056750	chr20	+	6907	11	NNC	ENSG00000171456.21	novel	7052	13	NA	NA	-15	-7	intron_retention	FALSE	non_canonical	0	0	junction_2	26.6647707659376	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGCAGTTGTGGTCTCA	-20	True	NA	8	True	AATAAA	-8	NA	32358314	32439311	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_32358833_32366383_32366467_32369011_32369124_32428127_32428249_32428324_32428423_32429337_32429432_32431320_32431485_32431582_32431680_32432879_32432986_32433283_32433918_32434431
H1_mix_00056751	chr20	+	549	4	NIC	ENSG00000171456.21	novel	1065	5	NA	NA	-6	1	intron_retention	FALSE	canonical	3	18	junction_3	26.106618998935	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATGAACCTGCTGTAAG	23	True	NA	6	True	AATAAA	-6	NA	32358536	32372224	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_32358833_32366383_32366467_32369014_32369124_32372163
H1_mix_00056752	chr20	+	8056	4	FSM	ENSG00000171456.21	ENST00000647223.1	8056	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_3	6.16441400296898	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTGTTGTCAGAGCCAC	84	False	NA	15	True	ATTAAA	-21	NA	32428763	32438415	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_32431485_32431582_32431680_32432879_32432986_32433283
H1_mix_00056754	chr20	+	4108	21	NIC	ENSG00000088305.18	novel	4336	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	287	junction_20	457.894048880306	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTCTGATGTCCCTTT	37	False	NA	23	True	ATTAAA	-16	NA	32762423	32809356	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_32762700_32780317_32780466_32781352_32781415_32784757_32784860_32786501_32786628_32787229_32787452_32788853_32789013_32791600_32791709_32792625_32792771_32793535_32793596_32795408_32795535_32795649_32795695_32796789_32796870_32797186_32797300_32798459_32798644_32799243_32799329_32800152_32800299_32800834_32800926_32801277_32801427_32802384_32802471_32807761
H1_mix_00056755	chr20	+	5731	22	ISM	ENSG00000088305.18	ENST00000328111.6	4336	23	39	0	0	0	intron_retention	FALSE	canonical	3	1488	junction_5	303.825816849271	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTCTGATGTCCCTTT	37	False	NA	23	True	ATTAAA	-16	NA	32762423	32809356	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_+_32762700_32780317_32780466_32781352_32781415_32784757_32784860_32786501_32786628_32787229_32787452_32788853_32789013_32791600_32791709_32792625_32792771_32793535_32793596_32795408_32795535_32795649_32795695_32796789_32796870_32797186_32797300_32798459_32798644_32799243_32799329_32800152_32800299_32800834_32800926_32801277_32801427_32802384_32802471_32805337_32805408_32806208
H1_mix_00056757	chr20	+	7268	11	FSM	ENSG00000078699.22	ENST00000359606.3	7274	11	0	6	0	0	multi-exon	FALSE	canonical	2	3	junction_1	37.0054050106197	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCCTCAAGCTGGAAT	123	False	NA	4	True	AATAAA	-15	NA	33600335	33650030	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_33600466_33606955_33607100_33611093_33611336_33619516_33619607_33623114_33623297_33624763_33625018_33628349_33628436_33629718_33629915_33636639_33636709_33640340_33640532_33644346
H1_mix_00056758	chr20	+	2969	1	FSM	ENSG00000149609.6	ENST00000607738.1	2254	1	-720	5	319	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCACCTGAGTCTTCTAC	326	False	NA	NA	False	AATAAA	-18	NA	33662645	33665614	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_33662600_33665600
H1_mix_00056759	chr20	+	1583	1	FSM	ENSG00000288649.2	ENST00000677665.1	1583	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATATGGGAGTTCCTCCA	0	True	NA	NA	False	AATAAA	-28	NA	33666942	33668525	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_33666900_33668500
H1_mix_00056760	chr20	+	3244	14	FSM	ENSG00000131061.14	ENST00000483118.5	3232	14	-14	2	0	-2	multi-exon	FALSE	canonical	2	7	junction_10	22.3934690394611	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCGGGTGGCCTGGGCCA	3	True	NA	7	True	AATAAA	-17	NA	33731995	33792267	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_33732053_33740901_33741013_33745102_33745300_33748922_33749073_33753171_33753424_33757147_33757344_33758715_33758807_33761861_33762056_33766850_33767042_33770083_33770293_33783731_33783865_33788862_33788975_33789517_33789589_33790987
H1_mix_00056761	chr20	+	3240	3	FSM	ENSG00000131061.14	ENST00000493497.1	3240	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	10	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGGTGGCCTGGGCCAAG	NA	False	NA	9	True	AATAAA	-19	NA	33787087	33792269	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_33788975_33789517_33789589_33790987
H1_mix_00056762	chr20	+	1204	7	FSM	ENSG00000125970.12	ENST00000448364.5	1204	7	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	614.986901396191	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGTGACTGTATCATAT	29	False	NA	NA	False	NA	NA	NA	33993679	34076039	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_33994132_34031521_34031605_34065043_34065161_34072065_34072331_34073562_34073636_34073818_34073867_34075873
H1_mix_00056763	chr20	+	630	1	FSM	ENSG00000264616.1	ENST00000583905.1	72	1	12	-570	12	570	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTGAGGCTTGTTCATAG	NA	False	NA	NA	False	NA	NA	NA	34049130	34049760	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_34049100_34049800
H1_mix_00056766	chr20	+	698	5	FSM	ENSG00000101460.13	ENST00000397709.1	698	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	51.7010638188423	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCCTCCAGCCGCTTG	-8	True	NA	16	True	AATAAA	-22	NA	34558717	34560345	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_34558909_34559207_34559264_34559346_34559454_34559735_34559906_34560171
H1_mix_00056767	chr20	+	4067	4	FSM	ENSG00000078804.13	ENST00000374809.6	4018	4	-52	3	-52	0	multi-exon	FALSE	canonical	2	3	junction_1	7.40870359029762	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCCTTTCTGCCTGAGTT	-26	True	NA	15	True	AATAAA	-18	NA	34704286	34713436	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_34704513_34708690_34708864_34709235_34709525_34710057
H1_mix_00056768	chr20	+	4187	5	FSM	ENSG00000078804.13	ENST00000374810.8	4127	5	-57	-3	-52	0	multi-exon	FALSE	canonical	2	6	junction_2	5.88960949469487	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTCTGCCTGAGTTGAG	-26	True	NA	18	True	AATAAA	-21	NA	34704286	34713439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_34704513_34705357_34705475_34708690_34708864_34709235_34709525_34710057
H1_mix_00056771	chr20	+	691	3	FSM	ENSG00000078814.18	ENST00000456649.1	691	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTGGTTTATTTGCTG	3706	False	NA	NA	False	AATAAA	-19	NA	35001244	35002437	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_35001350_35001430_35001527_35001947
H1_mix_00056772	chr20	+	4120	8	NIC	ENSG00000125966.10	novel	4376	9	NA	NA	94	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_4	52.6373809906137	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTCATTTCCCTGGGAT	93	False	NA	13	True	AATAAA	-14	NA	35226783	35276998	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_35226985_35246839_35246989_35251904_35252022_35254449_35254755_35267204_35267420_35269759_35269899_35271568_35271836_35274271
H1_mix_00056773	chr20	+	892	7	FSM	ENSG00000126001.16	ENST00000420564.5	702	7	-40	-150	-29	0	multi-exon	FALSE	canonical	2	4	junction_1	13.1529464379659	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAAGAACGGGGACTGG	NA	False	NA	NA	False	NA	NA	NA	35455134	35466204	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_35455238_35458303_35458375_35459982_35460106_35462264_35462554_35463574_35463632_35465742_35465826_35466038
H1_mix_00056774	chr20	+	897	7	FSM	ENSG00000126001.16	ENST00000446710.5	868	7	-29	0	-29	0	multi-exon	FALSE	canonical	2	6	junction_1	12.4454364683963	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAAGAACGGGGACTGG	NA	False	NA	NA	False	NA	NA	NA	35455134	35466204	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_35455243_35458303_35458375_35459982_35460106_35462264_35462554_35463574_35463632_35465742_35465826_35466038
H1_mix_00056777	chr20	+	1235	14	FSM	ENSG00000125991.21	ENST00000416206.5	1235	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	389.13639780246	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTGTCCCCCAGCCTCT	34	False	NA	-53	True	NA	NA	NA	35542101	35557546	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_35542186_35542322_35542394_35542512_35542601_35542821_35542942_35547411_35547506_35548508_35548675_35548807_35548866_35549162_35549208_35555043_35555076_35556032_35556130_35556206_35556272_35556972_35557110_35557193_35557250_35557424
H1_mix_00056778	chr20	+	1343	12	NIC	ENSG00000125991.21	novel	1302	13	NA	NA	-18	0	intron_retention	FALSE	canonical	3	970	junction_6	63.5457796844329	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTGGTCTCCGTGTGAT	106	False	NA	35	True	GATAAA	-24	NA	35542173	35557634	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_35542394_35542512_35542601_35542821_35542942_35547411_35547506_35548508_35548675_35548807_35548866_35555043_35555076_35556032_35556130_35556206_35556272_35556972_35557110_35557193_35557250_35557424
H1_mix_00056779	chr20	+	1178	11	ISM	ENSG00000125991.21	ENST00000348547.7	1302	13	379	1	14	0	3prime_fragment	FALSE	canonical	3	970	junction_5	60.7647924377266	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTGGTCTCCGTGTGA	20	False	NA	34	True	GATAAA	-23	NA	35542456	35557633	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_+_35542601_35542821_35542942_35547411_35547506_35548508_35548675_35548807_35548866_35555043_35555076_35556032_35556130_35556206_35556272_35556972_35557110_35557193_35557250_35557424
H1_mix_00056783	chr20	+	525	4	ISM	ENSG00000061656.11	ENST00000498203.1	687	7	1505	-91	-391	-24	3prime_fragment	FALSE	canonical	2	7	junction_1	4.18993502999218	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGATTTTTGGAGTAGAA	1395	False	NA	9	True	ATTAAA	-3	NA	35619193	35621025	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_+_35619311_35619578_35619747_35620683_35620774_35620875
H1_mix_00056784	chr20	+	436	3	NNC	ENSG00000025293.17	novel	832	6	NA	NA	5	21505	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_2	122.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGTGTGGTGGTGTGTG	2663	False	NA	NA	False	AATAAA	-14	NA	35771978	35823477	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_35772080_35801490_35801606_35823257
H1_mix_00056785	chr20	+	6103	20	NNC	ENSG00000025293.17	novel	5879	18	NA	NA	5	11	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	94.9534949593018	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTATTGTTGAGTTACAGTC	2663	False	NA	18	True	AATAAA	-29	NA	35771978	35950381	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_35772080_35800093_35800174_35801490_35801606_35812622_35812720_35842572_35842745_35847349_35847435_35858301_35858382_35863012_35863401_35869437_35869552_35870954_35871135_35871649_35871830_35899369_35899649_35913248_35913348_35914032_35914198_35917483_35917663_35927779_35927880_35931248_35931445_35938696_35939109_35940863_35941048_35947484
H1_mix_00056786	chr20	+	5687	17	NIC	ENSG00000025293.17	novel	5879	18	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_7	64.6057454391635	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCAGTTACGTATTGTT	-10	True	NA	7	True	AATAAA	-18	NA	35772026	35950370	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_35772080_35801490_35801606_35842572_35842745_35847349_35847435_35858301_35858382_35863012_35863401_35869437_35869552_35871649_35871830_35899369_35899649_35913248_35913348_35914032_35914198_35917483_35917663_35927779_35927880_35931248_35931445_35938696_35939109_35940863_35941048_35947484
H1_mix_00056787	chr20	+	3272	19	NNC	ENSG00000088367.23	novel	6276	22	NA	NA	-101	-6	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_13	37.9275218486556	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTGACATTCTAAAATTAT	-39	True	NA	10	True	AATAAA	-19	NA	36154638	36230335	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_36154897_36175550_36175716_36177951_36178057_36178629_36178673_36182271_36182348_36185116_36185336_36187675_36187764_36188346_36188500_36190276_36190375_36190621_36190798_36194214_36194361_36197858_36198042_36212271_36212377_36214356_36214441_36218875_36218963_36219760_36219845_36221863_36221945_36222277_36222395_36229331
H1_mix_00056788	chr20	+	3448	20	NNC	ENSG00000088367.23	novel	8418	25	NA	NA	-89	-6	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_15	39.7992886808469	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTGACATTCTAAAATTAT	-27	True	NA	10	True	AATAAA	-19	NA	36154650	36230335	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_36154897_36173763_36173955_36175550_36175716_36177951_36178057_36178629_36178673_36182271_36182348_36185116_36185336_36187675_36187764_36188346_36188500_36190276_36190375_36190621_36190798_36194211_36194361_36197858_36198042_36212271_36212377_36214359_36214441_36218878_36218963_36219760_36219845_36221863_36221945_36222277_36222395_36229331
H1_mix_00056789	chr20	+	5817	19	NIC	ENSG00000088367.23	novel	6276	22	NA	NA	0	72	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	27.9284800875379	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCCACTGGTACAAGTT	-3	True	NA	90	True	NA	NA	NA	36154739	36232871	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_36154897_36173763_36173955_36175550_36175716_36177951_36178057_36178629_36178673_36182271_36182348_36185116_36185336_36187675_36187764_36188346_36188500_36190276_36190375_36190621_36190798_36194211_36194361_36197858_36198042_36212271_36212377_36218875_36218963_36219760_36219845_36221863_36221945_36222277_36222395_36229331
H1_mix_00056792	chr20	+	2572	5	FSM	ENSG00000131043.13	ENST00000680933.1	2568	5	-4	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	121.71380365431	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACAATCCCCTTGTGTGT	4	True	NA	22	True	ATTAAA	-12	NA	36236463	36256926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_36236504_36236889_36237038_36239820_36240626_36244696_36244927_36255577
H1_mix_00056793	chr20	+	5095	13	FSM	ENSG00000080845.19	ENST00000339266.10	5058	13	-37	0	-34	0	multi-exon	TRUE	canonical	2	7	junction_2	211.061256905825	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGGGCTTGTGGCATTAT	-4	True	NA	23	True	AATAAA	-15	NA	36306301	36528633	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_36306513_36367044_36367276_36431645_36432717_36436108_36436351_36439753_36439869_36442726_36442778_36446696_36446938_36496704_36497067_36499587_36499677_36500198_36500612_36524249_36524342_36525850_36526007_36526812
H1_mix_00056794	chr20	+	3223	7	NIC	ENSG00000080845.19	novel	839	6	NA	NA	3331	0	intron_retention	FALSE	canonical	3	23	junction_1	157.238053776926	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGGGCTTGTGGCATTAT	2887	False	NA	23	True	AATAAA	-15	NA	36465077	36528633	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_36465368_36496704_36497067_36499587_36499677_36500198_36500612_36524249_36524342_36525850_36526007_36526812
H1_mix_00056796	chr20	+	3416	3	FSM	ENSG00000118707.11	ENST00000373874.6	3432	3	11	5	11	0	multi-exon	FALSE	canonical	3	10	junction_1	198.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACAGGGTTCTTGATTG	32	False	NA	33	True	AATAAA	-23	NA	36573498	36593945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_36573653_36578740_36578967_36590909
H1_mix_00056801	chr20	+	907	3	FSM	ENSG00000101084.19	ENST00000342422.3	896	3	-11	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	553	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTGATGATACCTGATA	34	True	NA	36	True	AATAAA	-20	NA	36605810	36612557	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_36606066_36607714_36607819_36612009
H1_mix_00056804	chr20	+	1502	5	NNC	ENSG00000101363.13	novel	1539	5	NA	NA	-9	-6	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	171.757095923283	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAACCTGCCTGTGTTGT	-9	True	NA	15	True	AATAAA	-15	NA	37289639	37317254	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_37289687_37297349_37297535_37298762_37298880_37301207_37301414_37316307
H1_mix_00056805	chr20	+	1554	5	NNC	ENSG00000101363.13	novel	1915	4	NA	NA	-2652	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	172.355011531432	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAACCTGCCTGTGTTGT	4543	False	NA	15	True	AATAAA	-15	NA	37294243	37317254	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_37294289_37297295_37297535_37298762_37298880_37301207_37301414_37316307
H1_mix_00056806	chr20	+	3837	13	NIC	ENSG00000197122.13	novel	4644	14	NA	NA	12	1	combination_of_known_splicesites	FALSE	canonical	3	12	junction_2	27.374334086269	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACAGTTTATTGAACATC	13	False	NA	24	True	ATTAAA	-24	NA	37346151	37405423	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_37346256_37365203_37365278_37384149_37384404_37386074_37386175_37393894_37393994_37394173_37394278_37396161_37396312_37397698_37397855_37400114_37400295_37401601_37401679_37402434_37402589_37402748_37402881_37403170
H1_mix_00056808	chr20	+	513	1	FSM	ENSG00000235044.1	ENST00000450588.1	505	1	-8	0	-8	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGACTTGTGTTTTATCT	6598	False	NA	NA	False	NA	NA	NA	37530030	37530543	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_37530000_37530500
H1_mix_00056809	chr20	+	1584	3	ISM	ENSG00000132821.12	ENST00000373461.9	1936	4	28512	3	28497	-3	3prime_fragment	FALSE	canonical	3	8	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTCTGGGCAGTGTCTT	NA	False	NA	NA	False	AATAAA	-13	NA	37931638	37945347	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_+_37931805_37933538_37933590_37943980
H1_mix_00056812	chr20	+	1511	4	FSM	ENSG00000174365.21	ENST00000483342.7	1577	4	63	3	3	0	multi-exon	FALSE	canonical	3	61	junction_1	6.97614984548545	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	-7	True	NA	32	True	AATAAA	-14	NA	38446682	38450921	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_38447624_38448661_38448731_38450335_38450448_38450532
H1_mix_00056816	chr20	+	3592	1	FSM	ENSG00000199691.1	ENST00000362821.1	315	1	125	-3402	125	3402	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCTTTTTTAAAAATAGC	NA	False	NA	NA	False	NA	NA	NA	38761652	38765244	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_38761700_38765200
H1_mix_00056817	chr20	+	2932	1	FSM	ENSG00000274825.1	ENST00000620080.1	638	1	-2294	0	-2294	0	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTTGTCTAATTTTTTT	NA	False	NA	5	True	AATAAA	-16	NA	38953615	38956547	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_38953600_38956500
H1_mix_00056818	chr20	+	202	1	Intergenic	novelGene_801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTAAGCCTGTCCCCTTC	NA	False	NA	NA	False	NA	NA	NA	40095686	40095888	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_40095700_40095900
H1_mix_00056819	chr20	+	765	2	Intergenic	novelGene_805	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	622	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGGTGGTCTCTTCAC	1783	False	NA	12	True	AATAAA	-24	NA	40271182	40274727	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_40271583_40274362
H1_mix_00056820	chr20	+	5271	33	NIC	ENSG00000124181.15	novel	5285	33	NA	NA	10	-1	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	18.8405884578349	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGACTTGTATGCTCTT	-4	True	NA	19	True	AATAAA	-20	NA	41136969	41175720	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_41137036_41137520_41137859_41159605_41159759_41159869_41159964_41160105_41160154_41162451_41162537_41162641_41162726_41162957_41162993_41163202_41163276_41163377_41163480_41163714_41163834_41163920_41164007_41164080_41164202_41164932_41165102_41165244_41165368_41165449_41165552_41165638_41165827_41166193_41166395_41166475_41166596_41166678_41166860_41167851_41167930_41168766_41168871_41169078_41169176_41169456_41169527_41170111_41170270_41172192_41172290_41172420_41172646_41172728_41172878_41173419_41173535_41173651_41173814_41173922_41174012_41174126_41174312_41174466
H1_mix_00056824	chr20	+	1227	7	FSM	ENSG00000124193.16	ENST00000668808.1	1227	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	84.1455419034319	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGTTTTGAGTTTATTG	-4	True	NA	28	True	AATAAA	-18	NA	43457892	43463605	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_43458141_43458360_43458510_43459770_43459896_43460032_43460242_43460514_43460599_43460702_43460853_43463343
H1_mix_00056825	chr20	+	5741	20	NIC	ENSG00000185513.17	novel	3432	22	NA	NA	5	0	intron_retention	TRUE	canonical	3	16	junction_9	18.2532204117975	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACTGATACGCAGCCAGAG	8	True	NA	-2	True	AATAAA	-7	NA	43507701	43550941	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_43507745_43513475_43513640_43513837_43514777_43515008_43515160_43515291_43515416_43516092_43516178_43528656_43528746_43529263_43529369_43530283_43530420_43532772_43532925_43533341_43533419_43534007_43534094_43534283_43534395_43534827_43534943_43535836_43535937_43536096_43536295_43536408_43536459_43540150_43540309_43540752_43540816_43548146
H1_mix_00056826	chr20	+	3005	5	FSM	ENSG00000185513.17	ENST00000473289.2	3003	5	-2	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	7.62807315119618	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTAATCCCAGTTACTCA	-21	True	NA	NA	False	TATAAA	-27	NA	43514440	43531589	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_43514777_43515008_43516178_43528656_43528746_43529263_43529369_43530283
H1_mix_00056827	chr20	+	5072	19	FSM	ENSG00000185513.17	ENST00000422861.3	5072	19	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_18	20.17485294514	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGAGTCTGTTTCTATTT	-21	True	NA	11	True	AATAAA	-20	NA	43514440	43550954	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_43514777_43515008_43515160_43515291_43515416_43516092_43516178_43528656_43528746_43529263_43529369_43530283_43530420_43530797_43530890_43532772_43532925_43533341_43533419_43534007_43534094_43534283_43534395_43534827_43534943_43535836_43535937_43536096_43536295_43536408_43536459_43540150_43540309_43540752_43540816_43548110
H1_mix_00056830	chr20	+	342	3	FSM	ENSG00000101049.18	ENST00000647716.1	1484	3	532	610	532	-610	multi-exon	FALSE	canonical	1	1	junction_1	0.5	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGGTCACAGCATTCT	9678	False	NA	NA	False	NA	NA	NA	43574908	43580061	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_43575005_43576223_43576380_43579971
H1_mix_00056843	chr20	+	457	3	FSM	ENSG00000101443.18	ENST00000462062.5	460	3	0	3	0	-2	multi-exon	FALSE	canonical	3	46	junction_1	361	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACGTTCTGTCTCTGTCTC	3	False	NA	21	True	AATAAA	-14	NA	45471272	45481529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45471418_45479941_45480095_45481370
H1_mix_00056844	chr20	+	1374	6	FSM	ENSG00000175063.17	ENST00000372568.4	914	6	-466	6	-36	-1	multi-exon	FALSE	canonical	3	32	junction_1	1138.47459348024	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAAGTTGTTGCGTTGTA	NA	False	NA	27	True	AATAAA	-20	NA	45812539	45816951	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45813291_45813436_45813465_45814383_45814471_45815540_45815746_45815853_45815914_45816708
H1_mix_00056845	chr20	+	2108	4	NIC	ENSG00000175063.17	novel	518	4	NA	NA	15	-2	intron_retention	FALSE	canonical	3	88	junction_1	1322.32698931341	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACAAGTTGTTGCGTTGT	16	True	NA	26	True	AATAAA	-19	NA	45813020	45816950	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_45814471_45815389_45815746_45815853_45815914_45816708
H1_mix_00056850	chr20	+	2433	14	FSM	ENSG00000064601.21	ENST00000606066.3	2433	14	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_10	38.6923841565233	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGGACGGTGTGGGGG	692	False	NA	NA	False	NA	NA	NA	45890962	45898949	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45891380_45891568_45891763_45891915_45892028_45892272_45892485_45892724_45892881_45893219_45893312_45893987_45894073_45894649_45894742_45894822_45894902_45894993_45895134_45896964_45897041_45897716_45897807_45898004_45898110_45898366
H1_mix_00056851	chr20	+	1917	15	FSM	ENSG00000064601.21	ENST00000191018.9	1898	15	-19	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	84.9571320473701	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTCTTCTCTGTGGCAC	-7	True	NA	11	True	ATTAAA	-18	NA	45891321	45898820	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45891426_45891568_45891763_45891915_45892028_45892272_45892324_45892397_45892485_45892724_45892881_45893219_45893312_45893987_45894073_45894649_45894742_45894822_45894902_45894993_45895134_45896964_45897041_45897716_45897807_45898004_45898110_45898366
H1_mix_00056852	chr20	+	1820	14	FSM	ENSG00000064601.21	ENST00000354880.9	1820	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	88.0057152528162	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTCTTCTCTGTGGCAC	-7	True	NA	11	True	ATTAAA	-18	NA	45891321	45898820	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45891380_45891568_45891763_45891915_45892028_45892397_45892485_45892724_45892881_45893219_45893312_45893987_45894073_45894649_45894742_45894822_45894902_45894993_45895134_45896964_45897041_45897716_45897807_45898004_45898110_45898366
H1_mix_00056853	chr20	+	2153	14	FSM	ENSG00000064601.21	ENST00000607212.3	2153	14	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_10	30.2136377373769	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGGACGGTGTGGGGG	-7	True	NA	NA	False	NA	NA	NA	45891321	45898949	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45891380_45891568_45892028_45892272_45892324_45892397_45892485_45892724_45892881_45893219_45893312_45893987_45894073_45894649_45894742_45894822_45894902_45894993_45895134_45896964_45897041_45897716_45897807_45898004_45898110_45898366
H1_mix_00056855	chr20	+	4717	12	FSM	ENSG00000064601.21	ENST00000484855.4	4697	12	-20	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	94.5019130507311	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGGACGGTGTGGGGG	1	True	NA	NA	False	NA	NA	NA	45891355	45898949	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45891426_45891568_45891763_45891915_45892028_45892272_45892324_45892397_45892485_45892724_45892881_45893219_45893312_45893987_45894073_45894649_45894742_45894822_45894902_45894993_45898110_45898366
H1_mix_00056857	chr20	+	1704	9	NNC	ENSG00000101017.14	novel	1733	10	NA	NA	0	11	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_6	34.8308412186671	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTGGGTGACATGAGCT	36	False	NA	NA	False	ATTAAA	-38	NA	46118347	46129874	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_46118395_46121819_46121899_46122232_46122359_46122609_46122757_46123125_46123220_46126639_46126742_46128137_46128225_46128329_46128359_46128881
H1_mix_00056858	chr20	+	4926	3	NIC	ENSG00000197496.6	novel	4227	5	NA	NA	10301	-21	intron_retention	FALSE	canonical	3	65	junction_2	3	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTGTTATTATTTGTAA	NA	False	NA	8	True	AATAAA	-17	NA	46724767	46736326	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_46726987_46729352_46729489_46733755
H1_mix_00056860	chr20	+	7954	23	FSM	ENSG00000124151.19	ENST00000372004.7	7939	23	-15	0	0	0	multi-exon	FALSE	canonical	2	10	junction_19	18.7725071525726	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAAAGAGTTTTTTTTTT	-11	True	NA	22	True	AATAAA	-21	NA	47501886	47656877	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_47502020_47583182_47583262_47622228_47622331_47623910_47624084_47625380_47625482_47627001_47627177_47627560_47627750_47627921_47628024_47633495_47633637_47634047_47634196_47635321_47635714_47635890_47636763_47637647_47637784_47639007_47639203_47639576_47639823_47639924_47640052_47642212_47642385_47647072_47647367_47649004_47649098_47650981_47651277_47652405_47652581_47652930_47653073_47653405
H1_mix_00056861	chr20	+	8885	38	NIC	ENSG00000124198.10	novel	8828	39	NA	NA	8	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_34	23.5351562402915	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATAGCTGTTTCTAATGT	-3	True	NA	6	True	AATAAA	-10	NA	48921718	49036689	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_48922011_48941198_48941230_48941863_48941988_48951322_48951470_48952704_48952885_48953555_48953791_48963829_48963899_48965874_48966024_48969146_48969278_48971119_48971355_48972325_48972426_48973144_48973285_48974765_48974875_48976015_48976200_48984728_48984841_48985407_48985614_48988303_48988389_48988490_48988663_48989284_48989437_48989555_48989685_48991039_48991199_48994450_48994599_48995782_48995883_48998192_48998234_48998335_48998506_49005069_49005222_49010231_49010405_49011923_49012085_49013563_49013695_49013830_49013961_49016279_49016416_49017248_49017388_49017495_49017551_49018883_49018999_49025312_49025482_49028529_49028669_49032048_49032167_49033022
H1_mix_00056862	chr20	+	8852	37	NIC	ENSG00000124198.10	novel	9031	39	NA	NA	20	-4	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	23.7803736900728	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATAGCTGTTTCTAATGT	9	True	NA	6	True	AATAAA	-10	NA	48921730	49036689	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_48922011_48951322_48951470_48952704_48952885_48953555_48953791_48963829_48963899_48965871_48966024_48969146_48969278_48971119_48971355_48972325_48972426_48973144_48973285_48974765_48974875_48976015_48976200_48984728_48984841_48985407_48985614_48988303_48988389_48988490_48988663_48989284_48989437_48989555_48989685_48991039_48991199_48994450_48994599_48995782_48995883_48998192_48998234_48998335_48998506_49005069_49005222_49010231_49010405_49011923_49012085_49013563_49013695_49013830_49013961_49016279_49016416_49017248_49017388_49017495_49017551_49018883_49018999_49023050_49023182_49025312_49025482_49028529_49028669_49032048_49032167_49033022
H1_mix_00056868	chr20	+	387	4	NNC	ENSG00000177410.13	novel	2608	5	NA	NA	163	87167	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	243.142390837596	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAGAAGA	155	False	NA	NA	False	NA	NA	NA	49280484	49386767	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_49280571_49280902_49280965_49289044_49289255_49386738
H1_mix_00056869	chr20	+	1614	2	FSM	ENSG00000124226.11	ENST00000624620.1	565	2	-31	-1018	-9	1018	multi-exon	FALSE	canonical	3	1078	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCAACTTTTTTTTTCCA	NA	False	NA	NA	False	AATATA	-43	NA	49936367	49942989	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_49936553_49941560
H1_mix_00056873	chr20	+	864	2	FSM	ENSG00000231742.6	ENST00000665536.1	864	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTCACTAATGTTTTTT	2	True	NA	NA	False	AATAAA	-30	NA	50172594	50173592	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_50172789_50172922
H1_mix_00056884	chr20	+	1520	11	FSM	ENSG00000101146.13	ENST00000527947.5	1503	11	-17	0	12	0	multi-exon	FALSE	canonical	3	428	junction_9	46.2860670180563	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCGGGTCATGGAGCTTTC	-15	True	NA	NA	False	GGGGCT	-23	NA	57351234	57375106	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_57351423_57354031_57354129_57354711_57354817_57356445_57356539_57365355_57365443_57366806_57366894_57367007_57367080_57368704_57368813_57373474_57373582_57373662_57373739_57374606
H1_mix_00056887	chr20	+	583	6	FSM	ENSG00000124222.22	ENST00000460655.5	572	6	-11	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	40.3762306314	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGACACATCAGTACCACTA	13	True	NA	NA	False	NA	NA	NA	58651271	58670547	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58651532_58652072_58652088_58659622_58659635_58667489_58667609_58667986_58668128_58670511
H1_mix_00056890	chr20	+	3585	19	NIC	ENSG00000254995.4	novel	3433	23	NA	NA	-162	426	intron_retention	FALSE	canonical	3	20	junction_1	185.569759935365	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTCACCTGGCCTCGTT	13	True	NA	14	True	ATTAAA	-14	NA	58651271	58715836	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_58652139_58667489_58667598_58667986_58668128_58669290_58669454_58670511_58670604_58671153_58671298_58673630_58673712_58691723_58691781_58693736_58693923_58694421_58694593_58698683_58698774_58699196_58699279_58701015_58701159_58707122_58707201_58712478_58712580_58713419_58713544_58713916_58714094_58714559_58714671_58715167
H1_mix_00056892	chr20	+	3433	23	FSM	ENSG00000254995.4	ENST00000530122.1	3433	23	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	213.016896858224	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGGGTTTTGGTTTGTCT	175	False	NA	16	True	NA	NA	NA	58651433	58715410	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58652139_58659622_58659635_58667489_58667598_58667986_58668128_58669290_58669454_58670511_58670604_58671153_58671298_58673630_58673712_58691033_58691228_58691404_58691563_58691723_58691781_58693736_58693923_58694421_58694593_58698683_58698774_58699196_58699279_58701015_58701159_58705497_58705570_58707122_58707201_58712478_58712580_58713419_58713544_58713916_58714094_58714559_58714671_58715167
H1_mix_00056893	chr20	+	815	5	FSM	ENSG00000124222.22	ENST00000496003.5	815	5	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_4	120.613794816348	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATATGTCTTTCAAGACT	487	False	NA	16	True	NA	NA	NA	58651745	58673711	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58652139_58667489_58667598_58667986_58668128_58670511_58670604_58673630
H1_mix_00056895	chr20	+	4342	8	FSM	ENSG00000124222.22	ENST00000358029.8	4329	8	-13	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	109.546933376726	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGGGTTCATGTTTTCTT	51	False	NA	42	True	ATTAAA	-32	NA	58651865	58679526	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58652139_58667489_58667598_58667986_58668128_58669290_58669454_58670511_58670604_58671153_58671298_58673630_58673712_58676186
H1_mix_00056897	chr20	+	2544	12	FSM	ENSG00000087460.29	ENST00000453292.7	2147	12	-389	-8	0	8	multi-exon	FALSE	non_canonical	0	0	junction_2	2349.69316442427	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCGTGAGTTATTTGTGG	8	True	NA	27	True	AATAAA	-29	NA	58839717	58911200	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58840887_58895611_58895685_58903527_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
H1_mix_00056899	chr20	+	2585	14	NNC	ENSG00000087460.29	novel	2578	13	NA	NA	0	73972	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_13	2302.96755559651	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCCGTAAAAGTTTATTT	-1	True	NA	NA	False	NA	NA	NA	58839747	58985164	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_58840887_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682_58911142_58985076
H1_mix_00056900	chr20	+	1564	12	FSM	ENSG00000087460.29	ENST00000478585.6	1548	12	-16	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2482.81740457546	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAGCAAAGAATGATGGG	9	False	NA	6	True	AATAAA	-45	NA	58889143	58911179	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58889354_58895611_58895685_58903527_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
H1_mix_00056902	chr20	+	1583	13	FSM	ENSG00000087460.29	ENST00000603546.2	1583	13	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	2073.65405477599	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	165	False	NA	19	True	AATAAA	-21	NA	58892332	58911192	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58892507_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
H1_mix_00056903	chr20	+	1782	11	FSM	ENSG00000087460.29	ENST00000487862.5	1782	11	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	2007.39143168441	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	3029	False	NA	19	True	AATAAA	-21	NA	58895196	58911192	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58895685_58903527_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
H1_mix_00056905	chr20	+	7329	8	FSM	ENSG00000087460.29	ENST00000683932.1	7318	8	-11	0	0	0	multi-exon	FALSE	canonical	3	5965	junction_4	370.745525796279	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATGATGGGACTCCCG	4	False	NA	13	True	AATAAA	-15	NA	58902758	58911186	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58903586_58903671_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
H1_mix_00056906	chr20	+	2190	9	FSM	ENSG00000087460.29	ENST00000684466.1	2181	9	-9	0	0	0	multi-exon	FALSE	canonical	3	5965	junction_5	416.372110467308	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATGATGGGACTCCCG	4	False	NA	13	True	AATAAA	-15	NA	58902758	58911186	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58903586_58903671_58903792_58905382_58905481_58909161_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
H1_mix_00056907	chr20	+	5751	8	FSM	ENSG00000087460.29	ENST00000682680.1	5743	8	-8	0	0	0	multi-exon	FALSE	canonical	3	5965	junction_4	362.629624959075	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATGATGGGACTCCCG	77	False	NA	13	True	AATAAA	-15	NA	58902831	58911186	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58903792_58905382_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
H1_mix_00056912	chr20	+	3581	4	FSM	ENSG00000101158.15	ENST00000478389.5	3581	4	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_3	39.6344406910062	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGATGTGACATTGTTT	2640	False	NA	34	True	AGTAAA	-34	NA	58990094	58995133	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58992021_58992997_58993545_58993623_58994240_58994641
H1_mix_00056919	chr20	+	3226	6	NNC	ENSG00000101181.18	novel	590	2	NA	NA	209	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.4832022232962	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGGTTTTTTTGTATGTT	8890	False	NA	20	True	CATAAA	-21	NA	62197423	62203570	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_62197528_62197851_62197968_62198633_62198853_62199118_62199258_62200682_62202844_62203083
H1_mix_00056920	chr20	+	3350	14	FSM	ENSG00000130703.17	ENST00000642932.1	3343	14	-7	0	-7	0	multi-exon	FALSE	canonical	2	3	junction_7	107.616566771975	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATTAAAGTTATTTAACCA	27	True	NA	3	True	NA	NA	NA	62238534	62294865	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_62238598_62256056_62256222_62259980_62260126_62263615_62263692_62272124_62272260_62273308_62273407_62279156_62279340_62280008_62280123_62281057_62281880_62284045_62284170_62286582_62286712_62289206_62289331_62291702_62291794_62293784
H1_mix_00056925	chr20	+	1002	2	FSM	ENSG00000171858.18	ENST00000370562.1	1002	2	0	0	0	0	multi-exon	FALSE	canonical	3	7124	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCAGGTTCATTCTGT	195	False	NA	14	True	AATAAA	-14	NA	62387296	62388520	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_62387389_62387610
H1_mix_00056931	chr20	+	3089	12	NIC	ENSG00000101194.18	novel	2594	14	NA	NA	-39	0	intron_retention	TRUE	canonical	3	95	junction_4	29.5198490443855	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGTTATTTTATTTAACA	7295	False	NA	18	True	ATTAAA	-15	NA	62952667	62968597	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_62952890_62956764_62956963_62957440_62957581_62960503_62960604_62962623_62963370_62963583_62963681_62964227_62964316_62965131_62965167_62965609_62965726_62966524_62966581_62966702_62966733_62967336
H1_mix_00056932	chr20	+	3122	12	ISM	ENSG00000101194.18	ENST00000370351.9	3518	13	8	992	6	-4	intron_retention	FALSE	canonical	3	65	junction_5	40.692558257262	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGACTGTTATTTTATTT	7	True	NA	14	True	ATTAAA	-11	NA	62952716	62968593	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_+_62952890_62956764_62956963_62957440_62957581_62960503_62960604_62962623_62962755_62963272_62963370_62963583_62963681_62964227_62964316_62965131_62965167_62965609_62965726_62966524_62966581_62966702
H1_mix_00056939	chr20	+	1090	2	FSM	ENSG00000125531.7	ENST00000370097.2	1090	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGTTTTAAAGGCAGCA	-4	True	NA	30	True	AATAAA	-43	NA	63554158	63556695	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63554207_63555653
H1_mix_00056946	chr20	+	4327	11	NIC	ENSG00000273154.3	novel	3119	11	NA	NA	-822	0	intron_retention	FALSE	canonical	3	12	junction_8	88.1059021859489	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCCTCGCAGCCTGCTC	-11	True	NA	11	True	AATAAA	-23	NA	63708041	63739103	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_63708119_63708552_63709165_63733218_63733353_63733586_63733740_63734704_63734825_63735158_63735565_63735780_63737648_63737820_63737903_63738007_63738061_63738182_63738500_63738597
H1_mix_00056948	chr20	+	1890	7	FSM	ENSG00000197114.12	ENST00000369967.7	1890	7	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	53.5456710564812	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGGAGATCAGCTGGC	33	False	NA	14	True	ATTAAA	-21	NA	63708085	63736142	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_63708189_63708552_63709165_63733218_63733353_63733586_63733740_63734704_63734825_63735158_63735565_63735780
H1_mix_00056960	chr20	+	3212	6	FSM	ENSG00000203880.12	ENST00000369758.8	3212	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_4	202.734308887272	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCCTGCGCACCTTATAC	-16	True	NA	15	True	AATAAA	-15	NA	64255740	64275653	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_64255871_64259941_64260273_64264428_64264532_64265257_64265430_64267967_64268011_64273220
H1_mix_00056962	chr20	-	2271	9	NIC	ENSG00000196476.12	novel	1576	11	NA	NA	-29	-2	intron_retention	FALSE	canonical	3	97	junction_7	38.2604152486614	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTTGCCAGTGTCTCG	-2	True	NA	-16	True	AATAAA	-16	NA	290458	270864	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_271268_275967_276880_277043_277146_277225_277384_278329_278430_279171_279331_283962_284082_289558_289677_290258
H1_mix_00056963	chr20	-	7278	3	FSM	ENSG00000125875.15	ENST00000680815.1	7261	3	0	-17	0	0	multi-exon	FALSE	canonical	3	164	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCCTGAGTTCTGTGAG	NA	False	NA	-9	True	AATAAA	-14	NA	443975	435479	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_438842_439107_439296_440247
H1_mix_00056978	chr20	-	2532	3	NNC	ENSG00000271303.2	novel	2528	2	NA	NA	10	64619	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	217.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGGACCTTCTAATCATT	8	True	NA	NA	False	NA	NA	NA	653190	581995	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_582022_646626_648918_652975
H1_mix_00056979	chr20	-	575	1	FSM	ENSG00000101278.6	ENST00000492704.1	531	1	-6	-38	-6	38	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCAAAAAAGAAAAGAACAAA	7032	False	NA	NA	False	AATAAA	-38	NA	839983	839408	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_839400_840000
H1_mix_00056980	chr20	-	1772	3	FSM	ENSG00000125895.6	ENST00000429036.2	1876	3	113	-9	113	0	multi-exon	FALSE	canonical	0	0	junction_2	3	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGAGGTTTCTTGGCATT	1044	False	NA	1	True	AATACA	-27	NA	1184868	1180560	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_1181588_1183770_1183949_1184301
H1_mix_00056981	chr20	-	886	2	FSM	ENSG00000125775.15	ENST00000467129.2	480	2	-83	-323	-83	0	multi-exon	FALSE	canonical	3	36	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGTCCGCAAAGGTAATT	2493	False	NA	NA	False	AATAAA	-20	NA	1311164	1309974	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_1310496_1310799
H1_mix_00056985	chr20	-	2603	8	FSM	ENSG00000088833.18	ENST00000353088.6	2611	8	0	8	0	-4	multi-exon	FALSE	canonical	2	2	junction_4	367.55557680549	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGGAGTTTTGTACTTT	11	True	NA	-8	True	ATTAAA	-14	NA	1466828	1442169	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_1443912_1445665_1445831_1452492_1452631_1453030_1453141_1454966_1455133_1458199_1458275_1464328_1464427_1466719
H1_mix_00056986	chr20	-	2588	8	FSM	ENSG00000088833.18	ENST00000555944.5	2588	8	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_6	438.526428589462	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTACTTTCTAATGGG	5	True	NA	0	True	ATTAAA	-22	NA	1466905	1442161	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_1443912_1445665_1445831_1452492_1452631_1453030_1453141_1454212_1454306_1454966_1455038_1458199_1458275_1466719
H1_mix_00056989	chr20	-	2539	4	FSM	ENSG00000101327.9	ENST00000217305.3	2556	4	0	17	0	-17	multi-exon	FALSE	canonical	1	2	junction_3	2.86744175568088	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGAAAGATGCTGATGA	-2	True	NA	-19	True	AATAAA	-1	NA	1994058	1978775	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_1980959_1982955_1983104_1992583_1992644_1993910
H1_mix_00056990	chr20	-	582	4	FSM	ENSG00000101327.9	ENST00000651882.1	807	4	225	0	-2	0	multi-exon	FALSE	canonical	1	2	junction_3	3.09120616516523	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACACTCTGAGCAAGAGCC	-4	True	NA	NA	False	NA	NA	NA	1994060	1980731	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_1980959_1982955_1983101_1992583_1992644_1993910
H1_mix_00056991	chr20	-	1108	8	NNC	ENSG00000125835.20	novel	1082	7	NA	NA	0	91095	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1734.54810912155	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATTCTCACCTGGCAACG	-10	True	NA	NA	False	AAAAAG	-1	NA	2470789	2370538	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_2370565_2461641_2461940_2462635_2462762_2463088_2463228_2463746_2463900_2465707_2465820_2467606_2467759_2470687
H1_mix_00056992	chr20	-	3410	6	FSM	ENSG00000088876.13	ENST00000278772.9	3415	6	4	1	4	-1	multi-exon	FALSE	canonical	2	10	junction_5	4.95580467734555	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATCAACTTGTTTTATTT	5	True	NA	NA	False	AATAAA	-30	NA	2508911	2481817	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_2484657_2492698_2492826_2493518_2493578_2493777_2494045_2500655_2500743_2508880
H1_mix_00056993	chr20	-	752	6	FSM	ENSG00000088876.13	ENST00000674000.1	773	6	21	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	9.01997782702374	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTAAATCTGGGTTGATA	15	True	NA	NA	False	AATAAA	-15	NA	2508901	2491848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_2492080_2492698_2492786_2493518_2493578_2493777_2494045_2500655_2500743_2508880
H1_mix_00056996	chr20	-	1620	11	FSM	ENSG00000101365.21	ENST00000488299.5	1620	11	0	0	0	0	multi-exon	FALSE	canonical	3	600	junction_1	76.7690692922612	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTGAATTTGTTTTTA	17	True	NA	-6	True	AATAAA	-14	NA	2664188	2658394	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_2658838_2659524_2659586_2659698_2659794_2660029_2660177_2660262_2660366_2660456_2660830_2660908_2660970_2663445_2663567_2663659_2663759_2663924_2664006_2664152
H1_mix_00056997	chr20	-	1305	13	NNC	ENSG00000101365.21	novel	1542	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	222.971597593356	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTGAATTTGTTTTTA	-10	True	NA	-6	True	AATAAA	-14	NA	2664215	2658394	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_2658522_2658757_2658838_2659524_2659586_2659698_2659794_2660029_2660177_2660262_2660366_2660456_2660591_2660696_2660830_2660908_2660970_2663445_2663567_2663659_2663759_2663924_2664006_2664152
H1_mix_00057000	chr20	-	531	2	FSM	ENSG00000132635.17	ENST00000474714.5	531	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTGTGCAGTGGGTAT	2772	False	NA	0	True	AATAAA	-25	NA	2838366	2835313	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_2835710_2838231
H1_mix_00057003	chr20	-	6585	4	NNC	ENSG00000088899.16	novel	4196	5	NA	NA	-1945	0	intron_retention	FALSE	canonical	0	0	junction_3	132.506603609028	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGGCCTGCTTGTGTC	3106	False	NA	-2	True	AATAAA	-25	NA	3170506	3162616	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_3165153_3165496_3166361_3166704_3167182_3167798
H1_mix_00057004	chr20	-	6646	4	ISM	ENSG00000088899.16	ENST00000337576.7	4196	5	3043	0	-1945	0	3prime_fragment	FALSE	canonical	3	73	junction_3	98.1914230243943	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGGCCTGCTTGTGTC	3106	False	NA	-2	True	AATAAA	-25	NA	3170506	3162616	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_-_3165153_3165496_3166361_3166704_3167182_3167737
H1_mix_00057005	chr20	-	3599	9	NNC	ENSG00000198171.13	novel	1303	9	NA	NA	355	1614	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_8	139.08270920571	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTGAGGCAGT	5107	False	NA	NA	False	AATAAA	-35	NA	3204327	3188735	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_3190820_3191189_3191239_3191764_3191822_3194829_3194869_3195230_3195354_3200000_3200103_3200341_3200455_3203212_3203417_3203499
H1_mix_00057008	chr20	-	509	1	FSM	ENSG00000230568.1	ENST00000446317.1	1477	1	120	848	120	-848	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGAGTTTGAGAAGAAATG	NA	False	NA	NA	False	AGTAAA	-41	NA	3490885	3490376	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_3490400_3490900
H1_mix_00057009	chr20	-	4242	18	NNC	ENSG00000149451.19	novel	3436	22	NA	NA	0	0	intron_retention	FALSE	canonical	2	5	junction_12	8.33676976435155	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACACTTGGACCTTGGT	-3	True	NA	NA	False	AATAAA	-14	NA	3682010	3667974	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_3668998_3669298_3669371_3669545_3669638_3671005_3671154_3671236_3671346_3671418_3671497_3671580_3671780_3671876_3671986_3672133_3672330_3672536_3672627_3672720_3674136_3674218_3674285_3674503_3674694_3674772_3674850_3674987_3675106_3677066_3677144_3679491_3679572_3681907
H1_mix_00057010	chr20	-	3535	22	FSM	ENSG00000149451.19	ENST00000379861.8	3674	22	134	5	19	0	multi-exon	FALSE	canonical	0	0	junction_11	9.03758842474846	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACACTTGGACCTTGGT	579	False	NA	NA	False	AATAAA	-14	NA	3682112	3667974	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_3668998_3669298_3669371_3669545_3669638_3671005_3671154_3671236_3671346_3671418_3671497_3671580_3671780_3671876_3671986_3672133_3672330_3672536_3672627_3672720_3672899_3673353_3673497_3673573_3673659_3673744_3673912_3674063_3674136_3674218_3674285_3674503_3674694_3674772_3674850_3675026_3675106_3677066_3677144_3679491_3679572_3681907
H1_mix_00057011	chr20	-	1254	7	NNC	ENSG00000101220.18	novel	1302	6	NA	NA	0	53402	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	443.531659899644	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCCACAGTGGCTCACAC	10	True	NA	NA	False	AAAAAG	-1	NA	3767728	3700105	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_3700136_3753510_3754159_3754396_3754520_3755468_3755608_3758535_3758679_3760081_3760187_3767662
H1_mix_00057012	chr20	-	1360	7	NNC	ENSG00000101220.18	novel	1734	6	NA	NA	0	7263	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	443.531659899644	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTGGGCTGTGTCTTTTG	605	False	NA	NA	False	NA	NA	NA	3767781	3746244	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_3746324_3753506_3754159_3754396_3754520_3755468_3755608_3758535_3758679_3760081_3760187_3767662
H1_mix_00057014	chr20	-	3149	6	FSM	ENSG00000101236.17	ENST00000432261.6	3149	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	29.6445610525776	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACAGTCCTTTTTTTAT	NA	False	NA	-14	True	ATTAAA	-20	NA	3974387	3931423	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_3934202_3934993_3935074_3945176_3945219_3948236_3948280_3963874_3964025_3974331
H1_mix_00057016	chr20	-	1361	7	NNC	ENSG00000132646.11	novel	1359	7	NA	NA	-63	16983	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	393.390144202362	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGAGTTAGATAAGATTC	7603	False	NA	NA	False	NA	NA	NA	5120021	5097969	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_5097996_5114956_5115363_5115448_5115573_5117469_5117665_5118609_5118678_5118768_5118867_5119577
H1_mix_00057017	chr20	-	1730	4	FSM	ENSG00000089063.15	ENST00000492419.1	1730	4	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_2	584.793030814227	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTAATGATTTTATGAT	0	True	NA	-12	True	AATAAA	-29	NA	5112969	5099839	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_5100932_5106187_5106311_5109157_5109446_5112742
H1_mix_00057019	chr20	-	444	1	FSM	ENSG00000225022.1	ENST00000436669.1	444	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTACCTTAAAGTCAGAAT	NA	False	NA	NA	False	NA	NA	NA	5292831	5292387	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_5292400_5292800
H1_mix_00057020	chr20	-	5202	15	FSM	ENSG00000101311.16	ENST00000217289.9	4637	15	-565	0	-565	0	multi-exon	TRUE	canonical	2	8	junction_14	5.43420760046007	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACGGTCCTGTTGTGTCCT	-4	True	NA	-7	True	AGTAAA	-19	NA	6123595	6074844	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_6077347_6079435_6079578_6084039_6084165_6085065_6085288_6087776_6087884_6088964_6089090_6094938_6094989_6096901_6097034_6097523_6097632_6107531_6107635_6110297_6110512_6112476_6112624_6115810_6116045_6119403_6119573_6122773
H1_mix_00057021	chr20	-	580	2	FSM	ENSG00000101384.12	ENST00000617357.1	580	2	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCGGAAGCCGGGCAGCCA	NA	False	NA	NA	False	NA	NA	NA	10641276	10639869	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_10639956_10640782
H1_mix_00057022	chr20	-	879	4	FSM	ENSG00000101384.12	ENST00000488480.2	1161	4	282	0	282	0	multi-exon	FALSE	canonical	3	104	junction_3	3.09120616516523	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTAAGACCGCTTTCCCT	5305	False	NA	NA	False	NA	NA	NA	10646084	10644442	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_10644980_10645142_10645257_10645355_10645470_10645970
H1_mix_00057023	chr20	-	3030	17	NIC	ENSG00000101384.12	novel	5940	26	NA	NA	366	0	intron_retention	FALSE	canonical	3	88	junction_8	8.46961480824246	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTAAGACCGCTTTCCCT	403	False	NA	NA	False	NA	NA	NA	10673633	10644442	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_10645257_10645355_10645470_10645970_10646085_10646938_10647104_10647959_10648111_10648548_10648723_10649060_10649108_10649521_10649636_10650246_10650361_10651580_10651695_10652130_10652251_10652467_10652599_10656397_10656459_10658467_10658723_10663962_10664015_10672700_10673007_10673449
H1_mix_00057024	chr20	-	5316	3	ISM	ENSG00000101384.12	ENST00000254958.10	5940	26	-38	21909	-38	-11612	5prime_fragment	FALSE	canonical	3	94	junction_1	4.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATTGTAAAAAAAAAAAAAAA	-1	True	NA	NA	False	TTTAAA	-17	NA	10674037	10659592	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_-_10664015_10672700_10673007_10673449
H1_mix_00057025	chr20	-	993	10	FSM	ENSG00000089123.16	ENST00000465381.5	993	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	31.0984101058416	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTGAGACATATACATT	20	False	NA	NA	False	NA	NA	NA	13638903	13435043	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_13435155_13483226_13483338_13528432_13528512_13534021_13534142_13580896_13580982_13587249_13587371_13623445_13623515_13625184_13625253_13629933_13630153_13638893
H1_mix_00057026	chr20	-	3793	3	NNC	ENSG00000125848.10	novel	4776	2	NA	NA	0	2321	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	37.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAAAGGTGATTATGATG	2	True	NA	NA	False	NA	NA	NA	14337608	14320663	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_14320688_14323994_14327559_14337403
H1_mix_00057028	chr20	-	206	1	FSM	ENSG00000277373.1	ENST00000610812.1	351	1	-7	152	-7	-152	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCTTGGGCATATGTTTT	3361	False	NA	NA	False	NA	NA	NA	17565858	17565652	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_17565700_17565900
H1_mix_00057029	chr20	-	4058	1	FSM	ENSG00000202260.1	ENST00000365390.1	305	1	-2448	-1305	-2448	1305	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTGTCTCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	17578958	17574900	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_17574900_17579000
H1_mix_00057030	chr20	-	4939	25	NNC	ENSG00000125844.17	novel	5049	25	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	166.826236112776	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTGCGGTCTCGTCTGG	9	True	NA	-9	True	ATTAAA	-17	NA	17682242	17613681	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_17614221_17614736_17614881_17615430_17615530_17615925_17616010_17616731_17616840_17618595_17618680_17619632_17619729_17620298_17620371_17620714_17620808_17621457_17621548_17621689_17621774_17621854_17621948_17624575_17624669_17625511_17625603_17627347_17627383_17627503_17627683_17629822_17629962_17633459_17633614_17635545_17635665_17636576_17636730_17641796_17641920_17642978_17643128_17658595_17659088_17659117_17660529_17682027
H1_mix_00057031	chr20	-	3791	26	FSM	ENSG00000125844.17	ENST00000377807.6	3792	26	0	1	0	0	multi-exon	FALSE	canonical	0	0	junction_2	194.433314017943	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCGGTCTCGTCTGGTCT	NA	False	NA	-6	True	ATTAAA	-20	NA	17682283	17613678	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_17614221_17614736_17614881_17615430_17615530_17615925_17616010_17616731_17616840_17618595_17618680_17619632_17619729_17620298_17620371_17620714_17620808_17621457_17621548_17621689_17621774_17621854_17621948_17624575_17624669_17625511_17625603_17627347_17627383_17627503_17627683_17629822_17629962_17633459_17633614_17635545_17635665_17636576_17636730_17641796_17641920_17642978_17643128_17658604_17658690_17659979_17660529_17679998_17680076_17682027
H1_mix_00057034	chr20	-	2930	14	Fusion	ENSG00000212232.1_ENSG00000089006.17	novel	3087	14	NA	NA	16	0	multi-exon	FALSE	canonical	3	19	junction_13	258.090966028573	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACGGCCTGTTTTCGTGG	2	True	NA	-27	True	AATAAA	-17	NA	17962930	17941599	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr20_-_17942408_17943109_17943196_17947485_17947646_17948889_17948977_17949063_17949104_17950131_17950208_17950290_17950397_17951499_17951596_17952586_17952711_17953995_17954118_17955364_17955476_17956932_17957038_17961139_17961327_17962108
H1_mix_00057035	chr20	-	2022	13	FSM	ENSG00000089006.17	ENST00000490175.5	2025	13	0	3	0	0	multi-exon	FALSE	canonical	3	103	junction_12	191.521466739951	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACGGCCTGTTTTCGTGG	-9	True	NA	-27	True	AATAAA	-17	NA	17968800	17941599	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_17942408_17943109_17943196_17947485_17947646_17948889_17948977_17949063_17949104_17950131_17950208_17950290_17950397_17951499_17951596_17952586_17952711_17953995_17954118_17955364_17955476_17956932_17957038_17968699
H1_mix_00057036	chr20	-	2464	13	NIC	ENSG00000089006.17	novel	2341	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	28	junction_10	210.57889785594	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACGGCCTGTTTTCGTGG	14	False	NA	-27	True	AATAAA	-17	NA	17968811	17941599	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_17942408_17943109_17943196_17947485_17947646_17948889_17948977_17949063_17949104_17950131_17950208_17950290_17950397_17951499_17951596_17952586_17952711_17953995_17954224_17955364_17955476_17956932_17957038_17968374
H1_mix_00057042	chr20	-	1087	1	FSM	ENSG00000089006.17	ENST00000606557.1	1087	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCCTCCACTCTTTTTCA	51	False	NA	-19	True	AATAAA	-33	NA	17968774	17967687	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_17967700_17968800
H1_mix_00057043	chr20	-	628	3	NIC	ENSG00000089006.17	novel	562	3	NA	NA	2	-13	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	182.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGATTCAGACGAGCCT	8	True	NA	-32	True	AATAAA	-20	NA	17968783	17967700	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_17968162_17968374_17968458_17968699
H1_mix_00057044	chr20	-	1967	6	ISM	ENSG00000089091.16	ENST00000476058.5	1709	7	66	0	66	0	3prime_fragment	FALSE	canonical	3	66	junction_5	16.1567323428966	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTCATTCCTTTCTT	NA	False	NA	0	True	AATAAA	-21	NA	18394637	18383366	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_-_18384565_18385015_18385091_18389700_18389829_18390378_18390460_18393710_18393812_18394253
H1_mix_00057045	chr20	-	3295	20	FSM	ENSG00000089091.16	ENST00000377630.9	3295	20	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_9	32.39446962137	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTCATTCCTTTCTT	9	True	NA	0	True	AATAAA	-21	NA	18467030	18383366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_18384565_18385015_18385091_18389700_18389829_18390378_18390460_18393710_18393812_18394253_18394351_18396471_18396547_18398522_18398627_18412645_18412854_18414347_18414513_18415326_18415450_18427066_18427160_18433651_18433766_18443346_18443465_18448983_18449070_18453730_18453828_18455246_18455362_18460152_18460307_18465249_18465378_18466995
H1_mix_00057046	chr20	-	2621	4	Genic_Genomic	ENSG00000278041.1	novel	3674	1	NA	NA	-3373	-6	multi-exon	FALSE	canonical	0	0	junction_3	4.96655480858378	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGAGTCTTGATTGATT	7751	False	NA	-6	True	AATAAA	-12	NA	21506307	21499266	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr20_-_21500323_21500752_21502077_21502170_21502313_21506208
H1_mix_00057047	chr20	-	2071	5	NNC	ENSG00000259974.4	novel	1840	5	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	41.5150575092941	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCTGTATTTCTTTGCA	6895	False	NA	NA	False	AATAAA	-16	NA	22578595	22560552	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_22561096_22563894_22565117_22566682_22566811_22567793_22567886_22578509
H1_mix_00057048	chr20	-	465	1	FSM	ENSG00000201728.1	ENST00000364858.1	117	1	-200	-148	-200	148	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGACCAGCCTGGTCAA	5477	False	NA	NA	False	NA	NA	NA	23381212	23380747	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_23380700_23381200
H1_mix_00057049	chr20	-	679	1	FSM	ENSG00000276952.1	ENST00000610840.1	674	1	5	-10	5	10	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTTTCATGTTTGTCT	NA	False	NA	NA	False	ATTAAA	-32	NA	25285583	25284904	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_25284900_25285600
H1_mix_00057050	chr20	-	814	8	FSM	ENSG00000100997.20	ENST00000672331.1	812	8	0	-2	0	-2	multi-exon	FALSE	canonical	0	0	junction_3	415.854615490185	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATCGTTGCAAGTGAAAT	2837	False	NA	NA	False	AATAAA	-22	NA	25317074	25294744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_25295031_25302218_25302347_25303549_25303629_25307965_25308046_25308456_25308495_25309445_25309576_25314924_25314971_25317047
H1_mix_00057051	chr20	-	1718	12	FSM	ENSG00000100997.20	ENST00000672406.1	1718	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	351.132924372683	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGACTGAGCTTTATTTAAG	730	False	NA	-62	True	NA	NA	NA	25390093	25300254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_25300885_25302218_25302347_25303549_25303629_25306832_25306916_25307965_25308046_25308456_25308495_25309445_25309576_25317047_25317079_25320198_25320319_25323324_25323431_25339226_25339352_25389925
H1_mix_00057055	chr20	-	829	1	FSM	ENSG00000227379.2	ENST00000414143.1	492	1	203	-540	203	540	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTACAACATGAATGAACCT	1362	False	NA	NA	False	NA	NA	NA	25368563	25367734	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_25367700_25368600
H1_mix_00057056	chr20	-	1525	3	FSM	ENSG00000101004.15	ENST00000464285.5	1514	3	0	-11	0	0	multi-exon	FALSE	canonical	3	228	junction_2	9.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGTATAG	NA	False	NA	5	True	NA	NA	NA	25458976	25452825	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_25453643_25455672_25455787_25458382
H1_mix_00057057	chr20	-	735	4	FSM	ENSG00000101004.15	ENST00000496509.2	735	4	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_3	13.1402688962847	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGATGGGCGCTGCTG	NA	False	NA	NA	False	NA	NA	NA	25462742	25455672	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_25455787_25458382_25458530_25461521_25461636_25462382
H1_mix_00057058	chr20	-	3489	14	ISM	ENSG00000101004.15	ENST00000422516.5	3801	23	85560	2847	-3154	0	internal_fragment	FALSE	canonical	3	28	junction_6	47.9415324384231	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGATGGGCGCTGCTG	NA	False	NA	NA	False	NA	NA	NA	25499957	25455672	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_-_25455787_25458382_25458530_25461521_25461636_25462382_25462542_25467388_25467459_25469990_25470096_25478922_25479207_25480160_25480268_25481967_25482101_25489243_25489325_25489874_25489986_25491350_25491526_25496662_25496804_25498209
H1_mix_00057060	chr20	-	3613	4	FSM	ENSG00000130684.14	ENST00000376436.5	3613	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	4.78423336480244	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTAGTCAGTGGTATTT	9888	False	NA	-6	True	AATAAA	-15	NA	25686957	25674214	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_25677038_25685566_25685663_25685995_25686123_25686390
H1_mix_00057061	chr20	-	2217	10	NIC	ENSG00000282826.3	novel	1098	10	NA	NA	8	-74	intron_retention	FALSE	canonical	3	32	junction_1	23.1180545125329	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGATTTTTGTTTCTGTC	4	True	NA	-79	True	AAAAAG	-37	NA	28602761	28580708	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_28582030_28583018_28583111_28583869_28583947_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28601656_28601757_28602608
H1_mix_00057062	chr20	-	704	7	ISM	ENSG00000282826.3	ENST00000684933.1	1048	10	80	2390	-14	0	5prime_fragment	FALSE	canonical	3	51	junction_6	14.7845640224301	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACGTGTGTGTATGCTTTT	63	False	NA	0	True	TATAAA	-16	NA	28602752	28583024	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_-_28583111_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28602608
H1_mix_00057063	chr20	-	200	1	FSM	ENSG00000224628.2	ENST00000445194.2	1519	1	1335	-16	1335	16	mono-exon	FALSE	NA	NA	NA	NA	NA	3906	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGCCCATCTTCTCAG	1353	False	NA	NA	False	NA	NA	NA	31285500	31285300	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_31285300_31285500
H1_mix_00057065	chr20	-	2562	3	FSM	ENSG00000171552.14	ENST00000456404.6	2562	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	196	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAAGAGCCTGGGCT	-36	True	NA	NA	False	AATAAA	-14	NA	31723978	31664462	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_31666087_31721654_31722349_31723734
H1_mix_00057068	chr20	-	430	1	FSM	ENSG00000224452.1	ENST00000426934.1	401	1	-9	-20	-9	20	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGGAAGCAGCTGGAAGA	NA	False	NA	NA	False	AAGAAA	-33	NA	32170799	32170369	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_32170400_32170800
H1_mix_00057069	chr20	-	4350	1	ISM	ENSG00000197183.15	ENST00000359676.9	5991	8	36063	0	36063	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTGCTTCCACTGTGTC	6352	False	NA	NA	False	AATAAA	-20	NA	32447408	32443058	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_-_32443100_32447400
H1_mix_00057070	chr20	-	1854	13	NIC	ENSG00000101391.21	novel	2080	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_8	94.410855955352	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTCTCTCACTTTGA	16	True	NA	-15	True	ATTAAA	-21	NA	33401504	33358838	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_33359124_33360350_33360492_33366858_33367009_33370498_33370630_33372641_33372698_33374114_33374213_33379460_33379692_33385649_33385771_33392141_33392243_33394031_33394067_33395012_33395117_33396760_33397085_33401427
H1_mix_00057071	chr20	-	1865	13	FSM	ENSG00000101391.21	ENST00000339269.5	1891	13	26	0	-12	0	multi-exon	FALSE	canonical	3	15	junction_6	95.19526715593	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTCTCTCACTTTGA	-15	True	NA	-15	True	ATTAAA	-21	NA	33401535	33358838	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_33359124_33360350_33360492_33366858_33367009_33370498_33370630_33372641_33372698_33374114_33374213_33385649_33385771_33387322_33387534_33392141_33392243_33394031_33394067_33395012_33395117_33396760_33397085_33401427
H1_mix_00057072	chr20	-	2650	4	FSM	ENSG00000101391.21	ENST00000461710.5	2650	4	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_2	24.2624538467705	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTTTGTCTCTCACTTT	NA	False	NA	-17	True	ATTAAA	-19	NA	33373359	33358840	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_33360492_33366858_33367009_33370498_33370630_33372641
H1_mix_00057073	chr20	-	763	7	FSM	ENSG00000101391.21	ENST00000471264.5	763	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	156.653988848743	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCCCTGGGGTTGGGGA	7721	False	NA	NA	False	NA	NA	NA	33401452	33370498	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_33370630_33372641_33372698_33374114_33374213_33379460_33379692_33385649_33385771_33392141_33392243_33401427
H1_mix_00057075	chr20	-	448	1	FSM	ENSG00000275223.1	ENST00000621597.1	723	1	91	184	91	-184	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCTAATTTTTGTAGAGA	7507	False	NA	NA	False	NA	NA	NA	33656332	33655884	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_33655900_33656300
H1_mix_00057076	chr20	-	2011	9	FSM	ENSG00000125967.17	ENST00000606525.5	2010	9	0	-1	0	0	multi-exon	TRUE	canonical	2	19	junction_8	34.3545393652717	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGCCTCCTGTCTCGCA	1061	False	NA	-1	True	AATAAA	-18	NA	33662778	33657086	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_33657858_33657941_33658034_33658476_33658555_33658721_33658835_33659496_33659551_33659652_33659733_33659884_33660004_33660258_33660396_33662211
H1_mix_00057077	chr20	-	3008	9	NIC	ENSG00000125967.17	novel	2010	9	NA	NA	-5	-3	intron_retention	FALSE	canonical	2	9	junction_7	43.7607129740821	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTGTTGCCTCCTGTCT	-4	True	NA	-5	True	AATAAA	-14	NA	33663724	33657090	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_33657858_33657941_33658034_33658476_33658555_33658721_33658835_33659496_33659551_33659652_33659733_33659884_33660059_33660258_33660396_33662211
H1_mix_00057084	chr20	-	5497	4	FSM	ENSG00000101417.12	ENST00000409299.8	5690	4	26	167	26	-167	multi-exon	FALSE	canonical	2	6	junction_2	4.49691252107735	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAAAACAGGGATGGCCA	-16	True	NA	NA	False	NA	NA	NA	33720284	33702924	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_33707970_33710554_33710754_33714673_33714737_33720094
H1_mix_00057085	chr20	-	1833	2	FSM	ENSG00000285230.3	ENST00000669769.1	1833	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCCACCCCAAACTCTGG	1541	False	NA	NA	False	NA	NA	NA	33992873	33989279	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_33990014_33991774
H1_mix_00057086	chr20	-	1459	10	NNC	ENSG00000125977.7	novel	2556	9	NA	NA	0	34927	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1354.01214503005	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAACATCTACTAAATGT	-14	True	NA	NA	False	NA	NA	NA	34112243	34053381	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_34053416_34089439_34089906_34090516_34090603_34093674_34093732_34096656_34096806_34097415_34097517_34098497_34098634_34103461_34103566_34105367_34105546_34112095
H1_mix_00057087	chr20	-	1458	10	NNC	ENSG00000125977.7	novel	2556	9	NA	NA	0	34927	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1354.01214503005	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAACATCTACTAAATGT	-14	True	NA	NA	False	NA	NA	NA	34112243	34053381	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_34053416_34089440_34089906_34090516_34090603_34093674_34093732_34096656_34096806_34097415_34097517_34098497_34098634_34103461_34103566_34105367_34105546_34112095
H1_mix_00057088	chr20	-	1459	10	NNC	ENSG00000125977.7	novel	2556	9	NA	NA	0	20503	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1354.01214503005	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCTACGTTTGAGAAAAC	-14	True	NA	NA	False	AAAAAG	-11	NA	34112243	34067805	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_34067831_34089430_34089906_34090516_34090603_34093674_34093732_34096656_34096806_34097415_34097517_34098497_34098634_34103461_34103566_34105367_34105546_34112095
H1_mix_00057089	chr20	-	1009	8	NNC	ENSG00000125977.7	novel	2556	9	NA	NA	21	-3448	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_1	1479.41819783374	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATATATACAATCCAATG	7	True	NA	NA	False	AATAAA	-10	NA	34112222	34091756	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_34091914_34093674_34093732_34096656_34096806_34097415_34097517_34098497_34098634_34103461_34103566_34105367_34105546_34112095
H1_mix_00057090	chr20	-	2180	11	NNC	ENSG00000101444.13	novel	2150	10	NA	NA	0	52142	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	535.727402696558	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAGTGTTAGATTTTACA	8501	False	NA	NA	False	AAAAAG	-7	NA	34303317	34228125	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_34228191_34280264_34281166_34285439_34285635_34290331_34290450_34290550_34290639_34290730_34290939_34291418_34291532_34292357_34292508_34294080_34294157_34295394_34295586_34303242
H1_mix_00057091	chr20	-	2176	11	NNC	ENSG00000101444.13	novel	2150	10	NA	NA	0	52142	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	535.727402696558	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAGTGTTAGATTTTACA	8501	False	NA	NA	False	AAAAAG	-7	NA	34303317	34228125	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_34228193_34280270_34281166_34285439_34285635_34290331_34290450_34290550_34290639_34290730_34290939_34291418_34291532_34292357_34292508_34294080_34294157_34295394_34295586_34303242
H1_mix_00057092	chr20	-	1774	11	NNC	ENSG00000101444.13	novel	2150	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	303	junction_1	447.386812501218	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTTGAGCCTTTATTTT	-2	True	NA	-4	True	AATAAA	-18	NA	34303355	34280267	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_34280651_34281026_34281166_34285439_34285635_34290331_34290450_34290550_34290639_34290730_34290939_34291418_34291532_34292357_34292508_34294080_34294157_34295394_34295586_34303242
H1_mix_00057093	chr20	-	7065	16	NNC	ENSG00000198646.14	novel	7083	15	NA	NA	0	-1889	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.4381446515645	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTTGTTCAACCCACG	8	True	NA	NA	False	NA	NA	NA	34825630	34699029	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_34699059_34714799_34715366_34727258_34727408_34732558_34732596_34736689_34736759_34740362_34743342_34746806_34746929_34749402_34750520_34754721_34754869_34757219_34758105_34758804_34758934_34768463_34768587_34776292_34776449_34782120_34782405_34792449_34792564_34825471
H1_mix_00057094	chr20	-	4083	14	FSM	ENSG00000198646.14	ENST00000612493.4	4082	14	0	-1	0	0	multi-exon	FALSE	canonical	3	9	junction_4	16.5600931878577	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGGTGATCAGCTCTT	8	True	NA	1	True	AATAAA	-43	NA	34825630	34714773	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_34715366_34727258_34727408_34732558_34732596_34736689_34736759_34746806_34746929_34749402_34750520_34754721_34754869_34757219_34758105_34758804_34758934_34768463_34768587_34776292_34776449_34782120_34782405_34792449_34792564_34825471
H1_mix_00057100	chr20	-	3261	18	NIC	ENSG00000100991.12	novel	3162	19	NA	NA	27	0	intron_retention	FALSE	canonical	3	670	junction_10	118.921741590162	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTGGACCTGGCTTTT	74	False	NA	-15	True	AATAAA	-44	NA	35092780	35002403	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_35003617_35004457_35004571_35005694_35005804_35006434_35006576_35007549_35007641_35008663_35008748_35010186_35010289_35013007_35013067_35016007_35016140_35021189_35021357_35035122_35035309_35044504_35044713_35049865_35049995_35054975_35055032_35057513_35057572_35069295_35069413_35078045_35078175_35092613
H1_mix_00057101	chr20	-	1613	9	NIC	ENSG00000088298.13	novel	1884	11	NA	NA	-83	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_4	63.4069199693535	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTTATCATGTTTTAC	755	False	NA	-23	True	AATAAA	-19	NA	35147419	35115363	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_35115934_35118597_35118720_35123889_35124035_35126250_35126376_35137879_35138006_35142372_35142479_35144978_35145019_35146824_35146936_35147151
H1_mix_00057102	chr20	-	663	3	NIC	ENSG00000126005.17	novel	1499	3	NA	NA	-5	-92	combination_of_known_junctions	FALSE	canonical	3	50	junction_1	15.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGGCTGCTCTCCATCCT	3	True	NA	75	True	NA	NA	NA	35278109	35277241	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_35277298_35277389_35277933_35278045
H1_mix_00057104	chr20	-	2036	7	FSM	ENSG00000101019.22	ENST00000359226.6	2036	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	96.6672413776019	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGATGGAAAAATTAATGGA	11	True	NA	-3	True	AATAAA	-32	NA	35411970	35302565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35304070_35306665_35306780_35314687_35314766_35381917_35382026_35384037_35384134_35394091_35394197_35411939
H1_mix_00057107	chr20	-	1812	7	FSM	ENSG00000088340.17	ENST00000616283.4	1818	7	0	6	0	-1	multi-exon	TRUE	canonical	3	7	junction_4	6.04611904907235	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGACCTGTGATCACGTG	NA	False	NA	-22	True	AATAAA	-12	NA	35564540	35558742	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35559053_35559155_35559257_35559340_35559628_35560122_35560365_35560539_35560639_35561851_35561938_35563853
H1_mix_00057108	chr20	-	2772	13	FSM	ENSG00000088340.17	ENST00000621044.4	2778	13	0	6	0	-1	multi-exon	TRUE	canonical	1	2	junction_3	6.25610812637449	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGACCTGTGATCACGTG	NA	False	NA	-22	True	AATAAA	-12	NA	35578930	35558742	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35559053_35559155_35559257_35559340_35559628_35560162_35560365_35560539_35560639_35561851_35561938_35563853_35564919_35565099_35565228_35576166_35576284_35576380_35576519_35576595_35576697_35576785_35576829_35578835
H1_mix_00057109	chr20	-	3505	16	FSM	ENSG00000088340.17	ENST00000613061.4	3710	16	204	1	204	-1	multi-exon	FALSE	canonical	1	1	junction_9	5.80650975677778	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGACCTGTGATCACGTG	NA	False	NA	-22	True	AATAAA	-12	NA	35582411	35558742	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35559053_35559155_35559257_35559340_35559628_35560122_35560639_35561851_35561938_35563853_35564919_35565099_35565228_35576166_35576284_35576380_35576519_35576651_35576697_35576785_35576829_35578835_35578968_35579055_35579115_35579257_35579457_35582038_35582201_35582294
H1_mix_00057110	chr20	-	1902	16	NIC	ENSG00000214078.13	novel	1952	16	NA	NA	1	4	combination_of_known_junctions	FALSE	canonical	3	339	junction_15	143.279586822408	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCACCACTCTCTTGTGT	16	True	NA	-11	True	AATAAA	-21	NA	35664888	35626039	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_35626382_35626566_35626804_35627279_35627414_35630438_35630491_35630740_35630796_35630900_35631035_35631113_35631174_35631267_35631355_35631491_35631579_35631687_35631778_35631944_35632026_35632162_35632235_35632310_35632386_35632516_35632697_35632794_35632924_35664801
H1_mix_00057114	chr20	-	1791	12	FSM	ENSG00000244005.13	ENST00000440385.5	1794	12	3	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	54.7968449354161	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGAGAAATAAACTCACCT	-4	True	NA	-40	True	NA	NA	NA	35699352	35668992	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35669686_35672754_35672845_35673600_35673685_35674349_35674432_35674511_35674618_35680736_35680872_35681887_35681982_35690412_35690566_35696376_35696461_35697683_35697801_35698480_35698591_35699309
H1_mix_00057126	chr20	-	840	3	FSM	ENSG00000131051.24	ENST00000426951.5	840	3	0	0	0	0	multi-exon	FALSE	canonical	3	975	junction_2	176	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTTGAAGATTAGATCA	1450	False	NA	NA	False	AATAAA	-19	NA	35740837	35731359	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_35732136_35738967_35739018_35740823
H1_mix_00057130	chr20	-	3034	17	NNC	ENSG00000101079.21	novel	2971	16	NA	NA	-31	4876	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	53.3710112678222	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCCTGGGCATGCATCGG	17	False	NA	NA	False	NA	NA	NA	36746121	36646889	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_36646922_36651770_36653702_36656359_36656412_36656496_36656533_36660336_36660385_36665045_36665098_36665235_36665302_36666288_36666393_36671340_36671398_36680815_36680903_36682517_36682579_36684412_36684476_36687491_36687613_36688678_36688785_36706971_36707008_36721678_36721784_36746044
H1_mix_00057133	chr20	-	2447	10	FSM	ENSG00000149636.16	ENST00000480153.5	2447	10	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_5	27.6409965695527	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTTTTGAGTGTATAA	-30	True	NA	-3	True	ATTAAA	-19	NA	36773798	36751794	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36770872_36771474_36773661
H1_mix_00057134	chr20	-	2167	10	FSM	ENSG00000149636.16	ENST00000448110.6	2129	10	-38	0	0	0	multi-exon	FALSE	canonical	3	34	junction_9	68.8930106293828	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTTTTGAGTGTATAA	-30	True	NA	-3	True	ATTAAA	-19	NA	36773798	36751794	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36770872_36771194_36773661
H1_mix_00057135	chr20	-	1901	10	FSM	ENSG00000149636.16	ENST00000373734.8	1915	10	14	0	-5	0	multi-exon	FALSE	canonical	3	27	junction_8	70.0238054759475	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTTTTGAGTGTATAA	9851	False	NA	-3	True	ATTAAA	-19	NA	36773804	36751794	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36771424_36771474_36773661
H1_mix_00057137	chr20	-	4584	15	FSM	ENSG00000101347.11	ENST00000262878.5	4334	15	162	-412	0	67	multi-exon	FALSE	canonical	3	6	junction_2	43.6004587131833	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACTCCTTTCATACCTT	-3	True	NA	39	True	NA	NA	NA	36951681	36890161	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_36893067_36897821_36897960_36904156_36904250_36905363_36905504_36911217_36911334_36912460_36912553_36916721_36916831_36916948_36917050_36919363_36919520_36927181_36927253_36930759_36930876_36935028_36935190_36941038_36941112_36946737_36946805_36951435
H1_mix_00057141	chr20	-	3245	21	FSM	ENSG00000080839.12	ENST00000344359.7	3225	21	0	-20	0	20	multi-exon	FALSE	canonical	3	40	junction_17	5.99061766431476	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGTATATTCAGTTTGAG	9	True	NA	NA	False	AATAAA	-40	NA	37095989	37003553	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_37003867_37007410_37007560_37018278_37018370_37020658_37020731_37022649_37022827_37032664_37032877_37035241_37035509_37040152_37040286_37044085_37044251_37047052_37047191_37055552_37055657_37056145_37056259_37061102_37061270_37062083_37062271_37065423_37065474_37066723_37066885_37066992_37067122_37067232_37067298_37067985_37068187_37088988_37089123_37095772
H1_mix_00057142	chr20	-	1795	4	NNC	ENSG00000166619.15	novel	439	4	NA	NA	3812	-1184	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.18993502999218	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTCACAGTTCTTAATA	8027	False	NA	49	True	AATAAA	-24	NA	37516491	37501076	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_37502555_37509103_37509274_37515036_37515128_37516435
H1_mix_00057143	chr20	-	2736	2	FSM	ENSG00000166619.15	ENST00000456058.1	572	2	-427	-1737	-427	0	multi-exon	FALSE	canonical	3	29	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGGTTTTATGTGGCT	5776	False	NA	-8	True	AATAAA	-16	NA	37522120	37517416	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_37519351_37521318
H1_mix_00057144	chr20	-	2094	2	FSM	ENSG00000166619.15	ENST00000397137.5	2036	2	-58	0	-58	0	multi-exon	TRUE	canonical	1	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGGTTTTATGTGGCT	106	False	NA	-8	True	AATAAA	-16	NA	37527790	37517416	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_37519351_37527630
H1_mix_00057145	chr20	-	1846	10	FSM	ENSG00000198959.12	ENST00000468262.5	1862	10	23	-7	0	7	multi-exon	FALSE	canonical	0	0	junction_3	2.36225462505214	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAAGAGTGAGGGGGTGG	1280	False	NA	NA	False	TATAAA	-22	NA	38165259	38137942	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_38138386_38139411_38139655_38141281_38141386_38142063_38142200_38146716_38146895_38147960_38148090_38150938_38151058_38155846_38156090_38161419_38161600_38165188
H1_mix_00057146	chr20	-	1885	3	FSM	ENSG00000196756.14	ENST00000659102.1	1884	3	0	-1	0	0	multi-exon	FALSE	canonical	3	22	junction_2	91.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGCTTCTTAAATCAGTG	6238	False	NA	-12	True	AATAAA	-18	NA	38423566	38420588	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_38420901_38421005_38421099_38422086
H1_mix_00057147	chr20	-	3267	3	FSM	ENSG00000196756.14	ENST00000667188.1	1316	3	-1968	17	-753	0	multi-exon	FALSE	canonical	3	28	junction_2	88.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTGCTTCTTAAATCA	9581	False	NA	-15	True	AATAAA	-15	NA	38424956	38420591	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_38420901_38421005_38421099_38422091
H1_mix_00057148	chr20	-	1316	8	NNC	ENSG00000196756.14	novel	1227	8	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	77.6175868983207	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTGCTTCTTAAATCA	33	True	NA	-15	True	AATAAA	-15	NA	38435311	38420591	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_38420901_38421005_38421099_38422091_38422242_38426418_38426504_38429953_38430153_38431040_38431113_38434503_38434627_38435026
H1_mix_00057153	chr20	-	772	1	FSM	ENSG00000235408.6	ENST00000439232.2	272	1	-410	-90	-410	90	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGCATGCAGATTATAT	9580	False	NA	NA	False	GGGGCT	-26	NA	38425764	38424992	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_38425000_38425800
H1_mix_00057154	chr20	-	224	1	FSM	ENSG00000261431.1	ENST00000570096.1	187	1	-39	2	-39	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTCAACTTGTCGACTTC	NA	False	NA	-6	True	ATTAAA	-24	NA	38962150	38961926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_38961900_38962200
H1_mix_00057155	chr20	-	409	2	Intergenic	novelGene_802	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGACTGACAGAGGATAAA	NA	False	NA	NA	False	NA	NA	NA	40274731	40269064	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_-_40269295_40274552
H1_mix_00057156	chr20	-	662	1	FSM	ENSG00000273951.1	ENST00000620124.1	655	1	-91	84	-91	-84	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGATGTCTGTATTTTA	NA	False	NA	NA	False	NA	NA	NA	41486316	41485654	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_41485700_41486300
H1_mix_00057157	chr20	-	427	1	FSM	ENSG00000282876.1	ENST00000635579.1	588	1	161	0	161	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCTTTCCACAATTTCTG	NA	False	NA	NA	False	ATTAAA	-16	NA	43590435	43590008	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_43590000_43590400
H1_mix_00057165	chr20	-	2641	6	NNC	ENSG00000124145.6	novel	2613	5	NA	NA	0	38678	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	72.502137899513	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTACAGTGCTGCCCATA	0	True	NA	NA	False	NA	NA	NA	45348424	45286609	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_45286638_45325287_45327416_45330365_45330565_45333022_45333070_45335781_45335921_45348324
H1_mix_00057174	chr20	-	4839	27	ISM	ENSG00000198026.8	ENST00000322927.3	4454	28	276	0	276	0	3prime_fragment	FALSE	canonical	3	61	junction_26	11.4788846539813	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTACTTTGTCTGCTTG	424	False	NA	-7	True	AATAAA	-23	NA	45971927	45948659	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_-_45949081_45949169_45949252_45949332_45949399_45949484_45949569_45949799_45949878_45949965_45950070_45950218_45950374_45950452_45950596_45952146_45952522_45952597_45952710_45953688_45953949_45957585_45957681_45957834_45957929_45959200_45959434_45960207_45960369_45960448_45960526_45960615_45960733_45960863_45960883_45962069_45962183_45963472_45963651_45963737_45963991_45965627_45965775_45967493_45967635_45967733_45968028_45968284_45968363_45969450_45969692_45971209
H1_mix_00057175	chr20	-	3245	8	NNC	ENSG00000124160.12	novel	3224	8	NA	NA	0	8	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	43.1475872525253	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTCATCTTTTTTGGGT	-16	True	NA	-13	True	AATAAA	-43	NA	46089952	46060982	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_46062890_46063336_46063681_46065028_46065229_46067054_46067182_46068501_46068639_46070209_46070537_46079386_46079454_46089816
H1_mix_00057188	chr20	-	5080	22	FSM	ENSG00000101040.20	ENST00000352431.6	3832	22	-21	-1227	0	0	multi-exon	FALSE	canonical	3	63	junction_21	101.704342299778	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTCGTCCTCGAATTTG	4132	False	NA	-14	True	ATTAAA	-18	NA	47356720	47209213	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_47210898_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47238895_47239139_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298948_47310055_47310205_47347855_47347927_47356656
H1_mix_00057189	chr20	-	5090	22	FSM	ENSG00000101040.20	ENST00000611941.4	5090	22	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	117.709681679111	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTCGTCCTCGAATTTG	3963	False	NA	-14	True	ATTAAA	-18	NA	47356889	47209213	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_47210898_47212641_47212726_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298948_47310055_47310205_47347855_47347927_47356656
H1_mix_00057190	chr20	-	5471	23	FSM	ENSG00000101040.20	ENST00000446994.6	5471	23	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_22	105.816697896499	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTCGTCCTCGAATTTG	3963	False	NA	-14	True	ATTAAA	-18	NA	47356889	47209213	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_47210898_47212641_47212726_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47238757_47239139_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298948_47310055_47310205_47347855_47347927_47356656
H1_mix_00057191	chr20	-	5542	24	FSM	ENSG00000101040.20	ENST00000355972.8	5542	24	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_23	131.181788468175	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTCGTCCTCGAATTTG	3963	False	NA	-14	True	ATTAAA	-18	NA	47356889	47209213	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_47210898_47212641_47212726_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47238757_47239139_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298948_47310055_47310205_47347855_47347927_47355449_47355521_47356656
H1_mix_00057192	chr20	-	5005	23	NIC	ENSG00000101040.20	novel	5511	24	NA	NA	137	-135	combination_of_known_junctions	FALSE	canonical	0	0	junction_21	131.784831204267	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTGTTTCTTTGTGAC	5332	False	NA	-6	True	ATTAAA	-18	NA	47355520	47209348	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_47210898_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47238895_47239139_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298873_47310055_47310205_47347855_47347927_47349860_47349989_47355449
H1_mix_00057193	chr20	-	5138	22	NIC	ENSG00000101040.20	novel	5511	24	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	3	63	junction_21	117.622132213264	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGTGGTCGTCCTCGAATT	4135	False	47356729	-16	True	ATTAAA	-16	NA	47356717	47209215	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_47210898_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47238757_47239139_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298873_47310055_47310205_47347855_47347927_47356656
H1_mix_00057194	chr20	-	5096	21	NNC	ENSG00000101040.20	novel	3832	22	NA	NA	-12301	-2	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	98.3112913148841	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGTGGTCGTCCTCGAATT	-1	True	NA	-16	True	ATTAAA	-16	NA	47369190	47209215	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_47210898_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47238895_47239139_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298948_47310055_47310205_47347855_47347927_47369041
H1_mix_00057195	chr20	-	4274	20	NNC	ENSG00000101040.20	novel	5362	22	NA	NA	-12298	-135	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_7	111.246675072478	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTGTTTCTTTGTGAC	2347	False	NA	-6	True	ATTAAA	-18	NA	47369187	47209348	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_47210898_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298948_47310055_47310205_47347855_47347927_47369041
H1_mix_00057206	chr20	-	3280	14	NIC	ENSG00000124214.21	novel	3334	14	NA	NA	124	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_11	339.052334023968	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGTTAATTTATTCT	269	False	NA	-10	True	AATAAA	-14	NA	49188210	49113522	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_49114894_49115781_49115868_49117125_49117249_49117776_49118097_49118332_49118409_49119981_49120129_49123091_49123236_49124374_49124606_49135832_49135932_49151581_49151748_49153932_49154072_49158938_49159147_49174194_49174270_49188115
H1_mix_00057211	chr20	-	2129	5	NNC	ENSG00000244687.13	novel	2258	5	NA	NA	0	20927	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1499.38995928344	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGGGCGCGGTGGCTCAC	-1	True	NA	NA	False	NA	NA	NA	50113146	50060196	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_50060220_50081123_50082915_50084128_50084255_50096671_50096821_50113106
H1_mix_00057215	chr20	-	1198	4	FSM	ENSG00000101126.18	ENST00000644386.1	1198	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	56.1090208631573	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTGCTACTGTTTGCT	2680	False	NA	-1	True	AATAAA	-17	NA	50928732	50889047	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_50889958_50902016_50902110_50903888_50904002_50928650
H1_mix_00057216	chr20	-	2198	3	FSM	ENSG00000000419.14	ENST00000682366.1	2266	3	68	0	68	0	multi-exon	FALSE	canonical	3	344	junction_2	9.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCTATAAATAAATGTATAT	NA	False	NA	10	True	NA	NA	NA	50942801	50934904	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_50936263_50940864_50940934_50942030
H1_mix_00057217	chr20	-	2553	5	NIC	ENSG00000026559.14	novel	967	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_4	93.2054182974359	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCTCTAATGTGGAT	44	False	NA	0	True	AATACA	-17	NA	51023081	51003655	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_51004807_51009564_51010365_51012358_51012417_51013728_51013845_51022653
H1_mix_00057218	chr20	-	2501	4	NIC	ENSG00000026559.14	novel	1096	3	NA	NA	-36	2	combination_of_known_junctions	FALSE	canonical	3	15	junction_3	98.1201078044432	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCTCTAATGTGGATCA	-18	True	NA	2	True	AATACA	-19	NA	51023143	51003653	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_51004807_51009564_51010365_51012358_51012417_51022653
H1_mix_00057219	chr20	-	2363	5	NIC	ENSG00000026559.14	novel	967	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_4	84.1382790411118	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCTCTAATGTGGAT	18	True	NA	0	True	AATACA	-17	NA	51023107	51003655	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_51004807_51009564_51010365_51012358_51012417_51013728_51013845_51022869
H1_mix_00057220	chr20	-	2264	4	NIC	ENSG00000026559.14	novel	2189	3	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	100	junction_3	62.7853486093691	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCTCTAATGTGGAT	1	True	NA	0	True	AATACA	-17	NA	51023124	51003655	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_51004807_51009564_51010365_51012358_51012417_51022869
H1_mix_00057225	chr20	-	3429	6	FSM	ENSG00000020256.20	ENST00000371515.8	3040	6	-392	3	-381	-3	multi-exon	FALSE	canonical	3	20	junction_5	21.0580151011438	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTGAATGTTAATGATTC	-1	True	NA	NA	False	AATAAA	-19	NA	52192160	52151280	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_52153429_52160122_52160375_52164694_52164758_52165863_52166026_52186831_52187066_52191590
H1_mix_00057226	chr20	-	2153	10	FSM	ENSG00000087586.18	ENST00000395911.5	2145	10	0	-8	0	7	multi-exon	FALSE	canonical	1	3	junction_9	356.335498728826	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTGTGTAATTCTTTCCA	-11	True	NA	-9	True	AATAAA	-23	NA	56392215	56369381	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56388686_56388785_56392153
H1_mix_00057227	chr20	-	2233	10	FSM	ENSG00000087586.18	ENST00000312783.10	2223	10	0	-10	0	9	multi-exon	FALSE	canonical	3	110	junction_9	310.579903637067	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTAATTCTTTCCACC	NA	False	NA	-7	True	AATAAA	-25	NA	56392295	56369379	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56390555_56390666_56392167
H1_mix_00057231	chr20	-	1746	6	FSM	ENSG00000101144.13	ENST00000395864.7	1746	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	38.484282505979	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTAATAAATGTCACAATAA	301	False	NA	-65	True	NA	NA	NA	57266342	57170530	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_57171109_57173199_57173311_57174930_57175008_57202474_57202624_57228228_57228422_57265704
H1_mix_00057232	chr20	-	4542	4	FSM	ENSG00000124225.16	ENST00000347215.8	4546	4	0	4	0	0	multi-exon	FALSE	canonical	1	3	junction_3	55.4496768851421	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCTTTTTCACTTCTTT	-20	True	NA	0	True	AATAAA	-19	NA	57710589	57648395	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_57652599_57653032_57653087_57659542_57659698_57710459
H1_mix_00057239	chr20	-	1692	5	FSM	ENSG00000101160.15	ENST00000679948.1	2360	5	0	668	0	-613	multi-exon	FALSE	canonical	3	13	junction_3	1.6393596310755	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAAGGCTGGCCTGAGAG	1	True	NA	NA	False	NA	NA	NA	59007254	58995873	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_58996802_58997602_58997754_59001464_59001645_59006321_59006486_59006985
H1_mix_00057243	chr20	-	1023	7	FSM	ENSG00000101182.15	ENST00000484488.5	1023	7	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_4	2034.93125737019	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGATGTGTAGGCCTTTCC	-18	True	NA	-10	True	TTTAAA	-23	NA	62143440	62136802	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_62136950_62137363_62137427_62138170_62138291_62139074_62139198_62139695_62139906_62140817_62140945_62143207
H1_mix_00057244	chr20	-	6877	40	NNC	ENSG00000130702.15	novel	11426	80	NA	NA	701	0	at_least_one_novel_splicesite	TRUE	canonical	3	22	junction_29	149.138807685734	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAATGAATGTTGACTTAA	6694	False	NA	67	True	ATTAAA	-18	NA	62325930	62309064	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_62309476_62309715_62309836_62309987_62310082_62310177_62310312_62310418_62310573_62310664_62310830_62310901_62310971_62311161_62311308_62311400_62311537_62311613_62311785_62311919_62312051_62312172_62312317_62312399_62312533_62312631_62312781_62312887_62313011_62313087_62313251_62313326_62313461_62313648_62313803_62314303_62314441_62314554_62314726_62314798_62314948_62315027_62315208_62315947_62316059_62316670_62316774_62316881_62317024_62317344_62317500_62317661_62317779_62318453_62318651_62318842_62319570_62319683_62319796_62320558_62320670_62320738_62320891_62322018_62322169_62322268_62322450_62322657_62322759_62323455_62323671_62323775_62323857_62324079_62324205_62324440_62324555_62325315
H1_mix_00057246	chr20	-	2547	6	ISM	ENSG00000149679.12	ENST00000279101.10	3783	10	12190	1452	1236	928	intron_retention	FALSE	canonical	3	98	junction_2	11.9096599447675	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGGTTTTTTGGGTCTT	NA	False	NA	-5	True	NA	NA	NA	62395095	62390085	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_-_62391112_62391248_62391454_62392388_62392496_62392919_62393024_62393439_62393606_62394156
H1_mix_00057248	chr20	-	4016	6	FSM	ENSG00000101190.13	ENST00000217162.5	2453	6	0	-1563	0	1563	multi-exon	FALSE	canonical	3	8	junction_1	32.3752992264164	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATCGTGTAGAATGCTA	85	False	NA	0	True	AATAAA	-18	NA	62861763	62843574	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_62846118_62854015_62854158_62857394_62857639_62859363_62859527_62860124_62860309_62861023
H1_mix_00057249	chr20	-	3066	6	NNC	ENSG00000101190.13	novel	2625	6	NA	NA	0	-6352	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_5	32.0087488040379	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTAATGTTTTGGCTTT	85	False	NA	-6	True	AATAAA	-20	NA	62861763	62851489	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_62852889_62854015_62854158_62857394_62857639_62859363_62859527_62860124_62860309_62860829
H1_mix_00057258	chr20	-	4558	9	FSM	ENSG00000101216.11	ENST00000266068.5	4559	9	0	1	0	-1	multi-exon	FALSE	canonical	3	61	junction_4	10.0124921972504	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTGTCTATCTCTTGGA	7204	False	NA	-9	True	AATAAA	-16	NA	63619876	63587602	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_63590730_63592021_63592145_63592532_63592671_63593010_63593083_63595609_63595768_63597756_63597861_63602964_63603093_63604742_63604841_63619266
H1_mix_00057264	chr20	-	1047	8	NNC	ENSG00000198276.16	novel	1838	15	NA	NA	51	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_7	189.380730869035	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGATTGGTTACAGCAC	9931	False	NA	NA	False	AATAAA	-21	NA	63941558	63939828	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_63940056_63940149_63940307_63940377_63940486_63940593_63940717_63940793_63940857_63940949_63941044_63941109_63941209_63941382
H1_mix_00057265	chr20	-	1838	15	FSM	ENSG00000198276.16	ENST00000354216.11	1838	15	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_8	192.812177297716	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGATTGGTTACAGCAC	-13	True	NA	NA	False	AATAAA	-21	NA	63956416	63939828	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_63940056_63940149_63940307_63940377_63940486_63940593_63940717_63940793_63940857_63940949_63941044_63941109_63941209_63943652_63943670_63944396_63944459_63944544_63944735_63945650_63945723_63945804_63945976_63946160_63946268_63946452_63946644_63956259
H1_mix_00057266	chr20	-	1793	15	NNC	ENSG00000198276.16	novel	1838	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_14	198.347355589601	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAATGAAGGTGTGATT	18	True	NA	NA	False	AATAAA	-10	NA	63956385	63939839	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_63940056_63940149_63940307_63940377_63940486_63940593_63940717_63940793_63940857_63940949_63941044_63941109_63941209_63943652_63943670_63944396_63944459_63944544_63944735_63945650_63945723_63945804_63945976_63946160_63946268_63946452_63946641_63956259
H1_mix_00057267	chr20	-	1845	13	FSM	ENSG00000198276.16	ENST00000358711.7	1845	13	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_6	205.939918422825	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAATGAAGGTGTGATT	18	True	NA	NA	False	AATAAA	-10	NA	63956385	63939839	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_63940056_63940149_63940307_63940377_63940486_63940593_63940717_63940793_63940857_63940949_63941209_63944396_63944459_63944544_63944735_63945650_63945723_63945804_63945976_63946160_63946268_63946452_63946644_63956259
H1_mix_00057271	chr20	-	4461	4	ISM	ENSG00000171700.14	ENST00000332298.9	1510	6	177	0	0	0	intron_retention	FALSE	canonical	3	103	junction_1	9.97775303139718	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTACTCATTTTTGTCC	5137	False	NA	-6	True	TTTAAA	-6	NA	64079811	64073180	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_-_64074045_64074143_64074379_64074466_64074542_64076524
H1_mix_00057274	chr20	+	984	1	Intergenic	novelGene_775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGAGTGGGCATTTCTCT	8204	False	NA	NA	False	ATTAAA	-21	NA	6787279	6788263	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_6787300_6788300
H1_mix_00057275	chr20	+	847	1	Intergenic	novelGene_778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAAGTTACTTCCTTGAG	NA	False	NA	NA	False	NA	NA	NA	12341036	12341883	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_12341000_12341900
H1_mix_00057276	chr20	+	339	1	Intergenic	novelGene_795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGCACATGTGTTTCTA	NA	False	NA	NA	False	NA	NA	NA	19753085	19753424	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_19753100_19753400
H1_mix_00057277	chr20	+	2339	1	Intergenic	novelGene_796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAAGGCCCTCTTGTCTCA	NA	False	NA	NA	False	AATAAA	-17	NA	24560727	24563066	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_24560700_24563100
H1_mix_00057278	chr20	+	1167	1	Intergenic	novelGene_798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGACTTGGCCCCTGCT	117	False	NA	NA	False	AAAAAG	-39	NA	38077054	38078221	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_38077100_38078200
H1_mix_00057279	chr20	+	360	1	Intergenic	novelGene_799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTAATGCTGCTTTTTCT	NA	False	NA	NA	False	AAAAAG	-26	NA	40094847	40095207	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_40094800_40095200
H1_mix_00057283	chr20	+	2644	12	NIC	ENSG00000125826.21	novel	3701	12	NA	NA	6	-1	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	28.8171780725684	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGGATGAGTGTGATGTC	107	False	NA	5	True	ATTAAA	-13	NA	408176	430963	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_408780_409883_410026_417525_417620_417731_417931_419346_419469_419557_419732_420870_421032_422126_422239_427312_427493_428490_428590_428950_429095_430349
H1_mix_00057284	chr20	+	2573	5	ISM	ENSG00000125826.21	ENST00000382181.2	2208	10	12387	6	-1242	-4	3prime_fragment	FALSE	canonical	3	84	junction_1	8.1967981553775	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGAAGGGATGAGTGTGAT	187	False	NA	2	True	ATTAAA	-10	NA	420699	430960	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_+_422239_427312_427493_428490_428590_428950_429095_430349
H1_mix_00057287	chr20	+	2256	11	NIC	ENSG00000101361.17	novel	1913	12	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	393	junction_7	180.156598546931	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGGTTCATGTTCTTTA	12	False	NA	12	True	AATAAA	-14	NA	2652644	2658391	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_2652932_2653278_2653394_2654413_2654576_2654748_2654948_2655324_2655513_2655594_2655747_2655933_2656215_2656400_2656550_2656773_2656896_2657080_2657219_2657928
H1_mix_00057302	chr20	+	2791	4	Intergenic	novelGene_790	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	61	junction_3	134.382538548231	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGTGTGTATTTATACC	160	False	NA	17	True	ATTAAA	-25	NA	12754183	12762734	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_12754423_12756263_12756426_12760245_12760364_12760462
H1_mix_00057303	chr20	+	3491	2	Intergenic	novelGene_792	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	201	junction_1	0	162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	239	False	NA	NA	False	AATAAA	-18	NA	12754262	12759594	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr20_+_12754423_12756263
H1_mix_00057309	chr20	+	2084	3	FSM	ENSG00000125846.16	ENST00000535822.5	2341	3	257	0	11	0	multi-exon	FALSE	canonical	1	1	junction_1	7	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGCCTGTGTCCCTCA	2	True	NA	15	True	AATAAA	-23	NA	18288539	18316994	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_18288605_18306297_18306394_18315071
H1_mix_00057310	chr20	+	2183	4	NIC	ENSG00000125846.16	novel	2318	5	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	13.8884444373331	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAACTGTGCCTGTGTCCC	30	True	NA	12	True	AATAAA	-20	NA	18288567	18316991	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_18288605_18305680_18305808_18306297_18306394_18315068
H1_mix_00057315	chr20	+	2769	15	NIC	ENSG00000197586.13	novel	4104	15	NA	NA	2	-16	combination_of_known_junctions	FALSE	canonical	3	62	junction_13	92.329075394836	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTCCTTCTCTGGGATT	4	True	NA	20	True	AATAAA	-13	NA	25195727	25226713	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_25195868_25206521_25206591_25207075_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25221231_25221334_25222837_25222979_25224100_25224158_25225161_25225318_25225498
H1_mix_00057316	chr20	+	2511	13	NIC	ENSG00000197586.13	novel	2708	14	NA	NA	0	-16	combination_of_known_junctions	FALSE	canonical	3	23	junction_3	100.822313447415	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTCCTTCTCTGGGATT	6	True	NA	20	True	AATAAA	-13	NA	25195729	25226713	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_25195868_25207075_25207398_25209848_25209926_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25221231_25221334_25222837_25222979_25224100_25224158_25225204_25225318_25225498
H1_mix_00057318	chr20	+	2300	13	NIC	ENSG00000197586.13	novel	2708	14	NA	NA	6	-16	combination_of_known_junctions	FALSE	canonical	3	94	junction_1	72.9438520751102	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTCCTTCTCTGGGATT	39	True	NA	20	True	AATAAA	-13	NA	25195762	25226713	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_25195868_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25221231_25221334_25222837_25222979_25224100_25224158_25225204_25225318_25225498
H1_mix_00057321	chr20	+	10183	1	FSM	ENSG00000278383.1	ENST00000611460.1	466	1	-6567	-3150	-6567	3150	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAATGCAAATCAAAACC	7774	False	NA	NA	False	AATAAA	-29	NA	25674213	25684396	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_25674200_25684400
H1_mix_00057327	chr20	+	2094	13	FSM	ENSG00000101336.18	ENST00000375852.5	2101	13	1	6	1	1	multi-exon	FALSE	canonical	1	2	junction_8	4.58863329931207	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAACGTTGGTTTTCCTG	-2	True	NA	11	True	AATAAA	-24	NA	32052242	32101850	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_32052487_32071661_32071783_32073318_32073362_32073715_32073819_32074622_32074722_32079773_32079878_32083893_32084044_32084390_32084544_32086627_32086808_32088567_32088645_32093862_32094017_32099003_32099136_32101316
H1_mix_00057341	chr20	+	5957	19	NIC	ENSG00000025293.17	novel	5879	18	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	76.6330038818172	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCAGTTACGTATTGTT	-20	True	NA	7	True	AATAAA	-18	NA	35772016	35950370	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_35772080_35800093_35800174_35801490_35801606_35842572_35842745_35847349_35847435_35858301_35858382_35863012_35863401_35869437_35869552_35870954_35871135_35871649_35871830_35899369_35899649_35913248_35913348_35914032_35914198_35917483_35917663_35927779_35927880_35931248_35931445_35938696_35939109_35940863_35941048_35947484
H1_mix_00057348	chr20	+	2630	2	FSM	ENSG00000174365.21	ENST00000661078.1	2624	2	-6	0	-2	0	multi-exon	FALSE	canonical	3	71	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAATAAATCTTGAAACATG	-24	True	NA	11	True	NA	NA	NA	38446665	38450900	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_38448731_38450335
H1_mix_00057350	chr20	+	4114	2	FSM	ENSG00000174365.21	ENST00000663763.1	4108	2	-6	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCACCCACTCAATAAATCT	3	True	NA	2	True	NA	NA	NA	38446692	38450891	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_38450448_38450532
H1_mix_00057357	chr20	+	3709	7	NNC	ENSG00000124193.16	novel	1680	7	NA	NA	0	24028	intron_retention	FALSE	non_canonical	0	0	junction_6	84.8752352312237	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAGAAAAACAGGATAG	31	False	NA	NA	False	AAAAAG	-2	NA	43457927	43490074	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_43458141_43458360_43458510_43459770_43459896_43460032_43460242_43460514_43460599_43460702_43463603_43490045
H1_mix_00057370	chr20	+	1965	11	FSM	ENSG00000124155.19	ENST00000639984.1	1965	11	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	266.10804196792	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTACTGTTTGTGGAAT	5593	False	NA	-12	True	NA	NA	NA	45416122	45426202	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45416344_45418851_45418980_45419294_45419396_45419507_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
H1_mix_00057371	chr20	+	2840	11	FSM	ENSG00000124155.19	ENST00000640364.1	2840	11	0	0	0	0	multi-exon	FALSE	canonical	3	652	junction_8	30.7759646477572	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTGTTTGTGGAATAAAA	5593	False	NA	-8	True	NA	NA	NA	45416122	45426206	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45416344_45416516_45416695_45418851_45418980_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45421584_45424215_45424382_45424495_45424580_45425573
H1_mix_00057378	chr20	+	5403	11	FSM	ENSG00000064601.21	ENST00000679343.2	5403	11	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_1	34.3313268022079	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGGACGGTGTGGGGG	692	False	NA	NA	False	NA	NA	NA	45890962	45898949	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_45891380_45891568_45891763_45891915_45892028_45892272_45892324_45892397_45892485_45892724_45893312_45893987_45894073_45894649_45894742_45894822_45894902_45894993_45898110_45898366
H1_mix_00057381	chr20	+	637	3	FSM	ENSG00000124140.15	ENST00000626701.1	617	3	-20	0	2	0	multi-exon	FALSE	canonical	1	2	junction_1	2.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTCATTCTCTTTCCTC	2	True	NA	5	True	AATAAA	-15	NA	46021691	46023581	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_46021887_46022842_46023072_46023368
H1_mix_00057395	chr20	+	742	2	FSM	ENSG00000101134.12	ENST00000491469.1	742	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTTCATTACATTGAATT	-7	True	NA	4	True	AATAAA	-17	NA	54475625	54495154	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_54476013_54494799
H1_mix_00057401	chr20	+	1465	13	FSM	ENSG00000087460.29	ENST00000667293.2	1465	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2078.91553593588	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	-7	True	NA	19	True	AATAAA	-21	NA	58888848	58911192	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_+_58888905_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
H1_mix_00057407	chr20	+	2495	12	NIC	ENSG00000101194.18	novel	2594	14	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_11	58.565355172203	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGTTATTTTATTTAACA	4	True	NA	18	True	ATTAAA	-15	NA	62952713	62968597	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_62952890_62956764_62956963_62957440_62957581_62960503_62960604_62962623_62962755_62963272_62963370_62963583_62963681_62964227_62964316_62965131_62965167_62965609_62965726_62966524_62966581_62967336
H1_mix_00057409	chr20	+	2778	2	ISM	ENSG00000101199.13	ENST00000395285.3	2697	3	100	0	100	0	intron_retention	FALSE	canonical	3	374	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAATGTCTGGATGCATCC	1507	False	NA	29	True	AATAAA	-16	NA	63285889	63289788	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_+_63286443_63287563
H1_mix_00057410	chr20	+	4437	35	NNC	ENSG00000258366.11	novel	4955	35	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_23	35.6981772866864	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACGGTGTCTTCGTGGCCT	-16	True	NA	18	True	AATAAA	-18	NA	63658304	63696245	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_63658467_63659232_63659505_63661297_63661497_63661849_63661944_63662545_63662628_63662828_63662890_63666003_63666080_63667468_63667554_63672555_63672622_63673939_63674094_63678144_63678184_63678267_63678347_63679848_63679947_63680663_63680720_63685522_63685598_63685790_63685873_63687637_63687771_63687936_63688051_63688138_63688180_63688300_63688387_63688527_63688606_63689054_63689133_63689501_63689649_63689764_63689866_63690086_63690211_63690293_63690442_63690804_63690948_63691741_63691838_63692804_63693004_63693142_63693284_63694371_63694489_63694740_63694975_63695065_63695222_63695327_63695481_63695777
H1_mix_00057411	chr20	+	4611	35	NIC	ENSG00000258366.11	novel	4615	35	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	34	junction_1	30.3455445844125	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACGGTGTCTTCGTGGCCT	-12	True	NA	18	True	AATAAA	-18	NA	63658308	63696245	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_+_63658460_63659232_63659505_63661297_63661497_63661849_63661944_63662545_63662628_63662828_63662890_63666003_63666080_63667468_63667554_63672555_63672622_63673939_63674094_63678144_63678184_63678267_63678347_63679848_63679947_63680663_63680720_63685522_63685598_63685790_63685873_63687637_63687771_63687936_63688051_63688138_63688180_63688300_63688387_63688527_63688606_63689054_63689133_63689501_63689649_63689749_63689866_63690086_63690211_63690293_63690442_63690804_63690948_63691741_63691838_63692804_63693004_63693142_63693284_63694371_63694489_63694740_63694975_63695065_63695222_63695327_63695651_63695777
H1_mix_00057412	chr20	+	4552	34	NNC	ENSG00000026036.22	novel	4824	35	NA	NA	-663	-2435	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	41.905398728659	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACGGTGTCTTCGTGGCCT	316	False	NA	18	True	AATAAA	-18	NA	63658636	63696245	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_63658714_63659232_63659505_63661297_63661497_63661849_63661944_63662545_63662628_63662828_63662890_63666003_63666080_63667468_63667554_63672555_63672622_63673939_63674094_63678213_63678347_63679848_63679947_63680663_63680720_63685522_63685598_63685790_63685873_63687637_63687771_63687936_63688051_63688138_63688180_63688300_63688387_63688527_63688606_63689054_63689133_63689501_63689649_63689749_63689866_63690086_63690211_63690293_63690442_63690804_63690948_63691741_63691838_63692804_63693004_63693142_63693284_63694371_63694489_63694740_63694975_63695065_63695222_63695327_63695651_63695777
H1_mix_00057419	chr20	+	3074	22	NNC	ENSG00000101161.8	novel	3047	21	NA	NA	0	10337	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_21	170.852245510319	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAGGTGAGACCCTGCGCC	-9	True	NA	NA	False	AAAAAG	-3	NA	63981131	64043437	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_+_63981317_63983046_63983216_63984906_63985026_63993406_63993486_63994915_63995093_63995326_63995483_63999044_63999140_63999602_63999760_64001076_64001240_64010199_64010319_64011284_64011504_64016722_64016846_64022756_64022879_64024554_64024694_64025938_64026059_64026981_64027159_64027602_64027737_64028477_64028570_64029376_64029492_64031917_64032045_64032840_64033098_64043407
H1_mix_00057422	chr20	-	4420	8	FSM	ENSG00000125875.15	ENST00000681777.1	4403	8	3	-20	-3	3	multi-exon	FALSE	canonical	1	11	junction_3	53.5906632135997	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGAGTTCTGTGAGCCA	-12	True	NA	-6	True	AATAAA	-17	NA	462536	435476	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_438842_439107_439296_440247_440390_441619_441690_441856_442044_445049_445131_447888_448075_462335
H1_mix_00057423	chr20	-	3501	9	FSM	ENSG00000125875.15	ENST00000681539.1	3506	9	14	-9	-3	3	multi-exon	FALSE	canonical	0	0	junction_1	55.1129521981902	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGAGTTCTGTGAGCCA	-12	True	NA	-6	True	AATAAA	-17	NA	462536	435476	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_437599_438549_438842_439107_439296_440247_440390_441587_441690_441856_442044_445049_445131_447888_448075_462335
H1_mix_00057425	chr20	-	2545	12	FSM	ENSG00000101266.19	ENST00000642689.1	2545	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	218.778993356045	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTTTTATTTATCAAGGT	11	True	NA	17	True	AATAAA	-4	NA	543732	482710	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499832_499935_505117_505230_508450_508661_543671
H1_mix_00057427	chr20	-	3558	4	NIC	ENSG00000101276.18	novel	3106	5	NA	NA	24	0	intron_retention	FALSE	canonical	3	15	junction_3	6.48074069840786	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCAGATCTTCCTTCAAA	7506	False	NA	-7	True	AATAAA	-18	NA	768476	760079	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_761825_763497_764004_765207_766335_768296
H1_mix_00057430	chr20	-	2704	9	NNC	ENSG00000088833.18	novel	2800	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	352.21726249575	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTACTTTCTAATGGG	17	True	NA	0	True	ATTAAA	-22	NA	1466822	1442161	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_1443912_1445665_1445831_1452492_1452631_1453030_1453141_1454212_1454306_1454966_1455136_1458196_1458275_1464328_1464427_1466719
H1_mix_00057432	chr20	-	1801	8	NIC	ENSG00000132635.17	novel	1979	8	NA	NA	25	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_5	17.2543990250106	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTGTGCAGTGGGTAT	31	True	NA	0	True	AATAAA	-25	NA	2840630	2835313	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_2835710_2836038_2836315_2838231_2838479_2838595_2838747_2838843_2838930_2839191_2839272_2839788_2839934_2840210
H1_mix_00057434	chr20	-	6506	5	NNC	ENSG00000088899.16	novel	4196	5	NA	NA	-1924	-3	intron_retention	FALSE	canonical	2	6	junction_4	123.030484027334	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATTCTTTGGCCTGCTTGT	3127	False	NA	-5	True	AATAAA	-22	NA	3170485	3162619	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_3165153_3165496_3166361_3166704_3167182_3167737_3167962_3168077
H1_mix_00057435	chr20	-	6306	4	NNC	ENSG00000088899.16	novel	4196	5	NA	NA	-1924	-3	intron_retention	FALSE	canonical	3	44	junction_3	111.613420140929	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATTCTTTGGCCTGCTTGT	3127	False	NA	-5	True	AATAAA	-22	NA	3170485	3162619	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_3165153_3165559_3166361_3166704_3167182_3167990
H1_mix_00057436	chr20	-	4061	5	NNC	ENSG00000088899.16	novel	4196	5	NA	NA	0	-11	intron_retention	FALSE	canonical	0	0	junction_3	107.952246387002	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGTGGTATTCTTTGGC	2	True	NA	-13	True	AATAAA	-14	NA	3173549	3162627	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_3165153_3165559_3166361_3166704_3167182_3167798_3167962_3173454
H1_mix_00057443	chr20	-	1735	5	FSM	ENSG00000089063.15	ENST00000379286.6	1735	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	629.261074594639	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTAATGATTTTATGAT	-3	True	NA	-12	True	AATAAA	-29	NA	5113042	5099839	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_5100932_5106187_5106311_5109331_5109446_5111499_5111606_5112742
H1_mix_00057446	chr20	-	2976	9	FSM	ENSG00000089195.15	ENST00000466974.5	2976	9	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_3	32.3552063043956	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTATGGTCTTATGGATA	37	True	NA	-4	True	ATTAAA	-21	NA	5950477	5937832	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_5938727_5941052_5942037_5942427_5942787_5943558_5943684_5943947_5944032_5944161_5944254_5944804_5944915_5946405_5946534_5950277
H1_mix_00057482	chr20	-	2616	9	NIC	ENSG00000125967.17	novel	2010	9	NA	NA	367	0	intron_retention	FALSE	canonical	2	5	junction_7	44.6570263228532	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGCCTCCTGTCTCGCA	487	False	NA	-1	True	AATAAA	-18	NA	33663352	33657086	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_33657858_33657941_33658034_33658476_33658555_33658721_33658835_33659496_33659551_33659652_33659733_33659884_33660035_33660258_33660396_33662211
H1_mix_00057483	chr20	-	1803	12	NIC	ENSG00000125967.17	novel	1942	13	NA	NA	9	0	intron_retention	FALSE	canonical	3	12	junction_4	31.4695182440468	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTTGCCTCCTGTCTCGC	29	True	NA	-2	True	AATAAA	-17	NA	33674379	33657087	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_33657858_33657941_33658034_33658476_33658555_33658721_33658835_33659652_33659733_33659884_33660004_33660258_33660396_33669374_33669473_33669686_33669713_33670683_33670793_33672397_33672423_33674223
H1_mix_00057490	chr20	-	7148	15	NNC	ENSG00000198646.14	novel	7083	15	NA	NA	-101	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_8	15.6133119549979	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGGTGATCAGCTCTT	NA	False	NA	1	True	AATAAA	-43	NA	34825752	34714773	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_34715366_34727258_34727408_34732558_34732596_34736689_34736759_34740362_34743342_34746806_34746929_34749402_34750520_34754721_34754833_34757219_34758105_34758804_34758934_34768463_34768587_34776292_34776449_34782120_34782405_34792449_34792564_34825471
H1_mix_00057501	chr20	-	4607	9	ISM	ENSG00000149636.16	ENST00000373750.9	2181	11	-7	0	0	0	intron_retention	FALSE	canonical	3	188	junction_5	28.3857358544745	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTTTTGAGTGTATAA	-2	True	NA	-3	True	ATTAAA	-19	NA	36773770	36751794	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36770872
H1_mix_00057507	chr20	-	2292	2	FSM	ENSG00000196756.14	ENST00000667282.1	2292	2	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTCTTAAATCAGTGA	6820	False	NA	-11	True	AATAAA	-19	NA	38422984	38420587	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_38420901_38421005
H1_mix_00057508	chr20	-	1154	4	FSM	ENSG00000196756.14	ENST00000657665.1	1154	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	89.9123029525005	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTCTTAAATCAGTGA	5601	False	NA	-11	True	AATAAA	-19	NA	38424203	38420587	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_38420901_38421005_38421099_38422091_38422242_38423605
H1_mix_00057509	chr20	-	1432	4	FSM	ENSG00000196756.14	ENST00000671309.1	1432	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	82.5523402992846	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTCTTAAATCAGTGA	8055	False	NA	-11	True	AATAAA	-19	NA	38427289	38420587	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_38420901_38421005_38421099_38422086_38422242_38426418
H1_mix_00057510	chr20	-	1449	6	FSM	ENSG00000196756.14	ENST00000660064.1	1444	6	0	-5	0	0	multi-exon	FALSE	canonical	3	14	junction_3	75.454357064387	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGCTTCTTAAATCAGTG	6975	False	NA	-12	True	AATAAA	-18	NA	38428369	38420588	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_38420901_38421005_38421099_38422086_38422242_38425934_38426049_38426418_38426504_38427679
H1_mix_00057516	chr20	-	1431	3	NIC	ENSG00000132823.11	novel	2109	4	NA	NA	5	-2	combination_of_known_splicesites	FALSE	canonical	3	82	junction_1	223	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTTTGAGAGAGTTATT	21	True	NA	-3	True	AATAAA	-18	NA	44210766	44196497	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_44197740_44206880_44206999_44210695
H1_mix_00057518	chr20	-	1805	6	NIC	ENSG00000025772.8	novel	1973	7	NA	NA	20	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_2	152.624244469874	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTTGTTGAACAAATTT	24	True	NA	-4	True	AATAAA	-24	NA	44960377	44942129	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_44943214_44943452_44943580_44951832_44952003_44955067_44955221_44956385_44956486_44960206
H1_mix_00057523	chr20	-	1939	9	NNC	ENSG00000080189.15	novel	5820	10	NA	NA	1	-199	intron_retention	FALSE	canonical	3	13	junction_5	96.9793792514677	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGAGACCTTACATGTT	6	True	NA	-6	True	AATAAA	-23	NA	46364403	46349728	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_46350525_46350760_46350891_46352050_46352186_46354881_46354966_46355072_46355242_46356573_46356638_46357622_46357774_46358386_46358764_46364370
H1_mix_00057524	chr20	-	3665	23	NNC	ENSG00000062598.18	novel	3666	22	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_13	68.5417770896814	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTTCCTGTTAACAGC	34	False	NA	-14	True	AATAAA	-19	NA	46406578	46366049	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_46367561_46368890_46368969_46370442_46370526_46371351_46371460_46371578_46371692_46371805_46371970_46373398_46373536_46374331_46374441_46374535_46374641_46375235_46375371_46375667_46375791_46380252_46380304_46382205_46382242_46383415_46383495_46386123_46386276_46387337_46387438_46389038_46389221_46393092_46393144_46393528_46393602_46394048_46394090_46394404_46394533_46398696_46398772_46406547
H1_mix_00057525	chr20	-	3612	22	NIC	ENSG00000062598.18	novel	3666	22	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_20	43.8405169872028	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTTCCTGTTAACAGC	22	True	NA	-14	True	AATAAA	-19	NA	46406590	46366049	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_46367561_46368890_46368969_46370442_46370526_46371351_46371460_46371578_46371692_46371805_46371970_46373398_46373536_46374331_46374441_46374535_46374641_46375235_46375371_46375667_46375791_46380252_46380304_46383415_46383495_46386123_46386276_46387337_46387438_46389038_46389221_46393092_46393144_46393528_46393602_46394048_46394090_46394404_46394504_46398696_46398772_46406547
H1_mix_00057527	chr20	-	4757	5	FSM	ENSG00000198185.12	ENST00000692313.1	4767	5	10	0	5	0	multi-exon	FALSE	canonical	3	13	junction_4	31.1287648325468	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGCCAAATTTGTCT	2	True	NA	-10	True	AGTAAA	-20	NA	46513549	46499629	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr20_-_46503098_46504213_46504307_46504613_46504741_46512081_46512141_46512539
H1_mix_00057531	chr20	-	5136	22	NIC	ENSG00000101040.20	novel	5281	23	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	26	junction_11	127.616204659165	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGTGGTCGTCCTCGAATT	5	True	NA	-16	True	ATTAAA	-16	NA	47356697	47209215	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_47210898_47212641_47212726_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47238757_47239139_47246007_47246518_47249286_47249440_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298948_47310055_47310205_47347855_47347927_47356656
H1_mix_00057532	chr20	-	5232	23	NNC	ENSG00000101040.20	novel	5273	23	NA	NA	-12223	-2	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_8	86.7652504040987	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGTGGTCGTCCTCGAATT	2422	False	NA	-16	True	ATTAAA	-16	NA	47369112	47209215	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_47210898_47212641_47212726_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47238757_47239139_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298873_47310055_47310205_47347855_47347927_47369041
H1_mix_00057533	chr20	-	5101	22	NNC	ENSG00000101040.20	novel	3567	23	NA	NA	-12226	-2	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_21	94.832923854071	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGTGGTCGTCCTCGAATT	2419	False	NA	-16	True	ATTAAA	-16	NA	47369115	47209215	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_47210898_47212641_47212726_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47238895_47239139_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298948_47310055_47310205_47369041
H1_mix_00057546	chr20	-	1339	8	ISM	ENSG00000124224.18	ENST00000244070.7	1474	10	42	1310	36	0	internal_fragment	FALSE	canonical	3	34	junction_5	5.42104741743151	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCTCTTACTTTTTGA	1258	False	NA	-11	True	ATTAAA	-15	NA	58309397	58247055	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr20_-_58247507_58248114_58248274_58250886_58250953_58251756_58251865_58271362_58271506_58272768_58272876_58286313_58286447_58309225
H1_mix_00057548	chr20	-	909	4	NNC	ENSG00000235590.8	novel	960	4	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	12.2836838484589	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGAGCCTACTGTGGATT	52	False	NA	-1	True	AATAAA	-34	NA	58850840	58818917	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_58819256_58841936_58842217_58842432_58842546_58850662
H1_mix_00057549	chr20	-	1088	5	NNC	ENSG00000235590.8	novel	1156	5	NA	NA	9	-7	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_4	13.2382022948737	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGTCAGACAGAGCCTAC	37	False	NA	-9	True	AATAAA	-26	NA	58850855	58818925	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_58819256_58841936_58842217_58842432_58842546_58848878_58848918_58850529
H1_mix_00057553	chr20	-	3695	9	NIC	ENSG00000149679.12	novel	3783	10	NA	NA	12	2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	36.3206208647374	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCACAGCTTGTCTCCT	5452	False	NA	-6	True	TTTAAA	-41	NA	62407273	62388631	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_62391112_62391248_62391454_62392388_62392496_62392919_62393024_62393439_62393606_62394156_62394266_62396314_62396408_62396520_62396593_62406914
H1_mix_00057559	chr20	-	1233	7	NNC	ENSG00000198276.16	novel	1838	15	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_6	181.714748988628	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGATTGGTTACAGCAC	9893	False	NA	NA	False	AATAAA	-21	NA	63941596	63939828	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr20_-_63940056_63940149_63940307_63940377_63940486_63940593_63940717_63940793_63940857_63940949_63941044_63941135
H1_mix_00057563	chr20	-	1815	5	NIC	ENSG00000171700.14	novel	1619	6	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	45.996603135449	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTACTCATTTTTGTCCA	5137	False	NA	-5	True	TTTAAA	-7	NA	64079811	64073179	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr20_-_64074045_64074143_64074379_64074466_64074542_64076524_64076647_64079293
H1_mix_00057571	chr21	+	1606	4	FSM	ENSG00000274333.4	ENST00000624627.3	1604	4	-2	0	-2	0	multi-exon	FALSE	canonical	3	26	junction_1	77.9914525231238	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAAGTCTTTGGATTTTT	NA	False	NA	NA	False	TATAAA	-21	NA	5553666	5591228	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_5553839_5566124_5566184_5585822_5585988_5590018
H1_mix_00057572	chr21	+	2725	3	FSM	ENSG00000274333.4	ENST00000619252.4	549	3	30	-2206	-2	402	multi-exon	FALSE	canonical	3	57	junction_1	70.5	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGTGTCATAGTGCATCT	NA	False	NA	NA	False	AATAAA	-14	NA	5553666	5592406	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_5553839_5585822_5585988_5590018
H1_mix_00057573	chr21	+	7628	2	FSM	ENSG00000274333.4	ENST00000624444.1	7628	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTCTCAAATTACTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	5582227	5592004	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_5585988_5588136
H1_mix_00057574	chr21	+	337	1	FSM	ENSG00000280013.1	ENST00000623928.1	207	1	182	-312	182	312	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACCTGTAGGTTCACCTA	NA	False	NA	NA	False	NA	NA	NA	6008785	6009122	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_6008800_6009100
H1_mix_00057575	chr21	+	370	3	FSM	ENSG00000275993.3	ENST00000624077.1	471	3	0	101	0	-101	multi-exon	FALSE	canonical	3	12	junction_1	2.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGGGTCAGCTTGCCTT	25	False	NA	NA	False	CATAAA	-11	NA	6111169	6112855	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_6111253_6112069_6112240_6112738
H1_mix_00057576	chr21	+	3609	6	ISM	ENSG00000275993.3	ENST00000613488.3	4747	14	7123	32	7084	-32	3prime_fragment	FALSE	canonical	2	7	junction_5	3.2	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGACTTTTTCCCTTCCT	19	False	NA	NA	False	AATAAA	-19	NA	6118253	6123746	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr21_+_6118403_6118782_6118909_6119023_6119241_6119719_6120002_6120486_6120719_6121143
H1_mix_00057577	chr21	+	6340	3	NIC	ENSG00000278903.4	novel	935	5	NA	NA	0	-3	intron_retention	FALSE	canonical	3	5	junction_1	10	2308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATACTTGTTGCCTCATGC	-16	True	NA	NA	False	AATAAA	-14	NA	6318439	6329950	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_+_6318605_6322599_6322698_6323873
H1_mix_00057578	chr21	+	2249	4	FSM	ENSG00000277067.4	ENST00000623095.3	2247	4	-2	0	-2	0	multi-exon	FALSE	canonical	3	26	junction_1	91.2152521359352	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCTTTGTTTCTACAT	NA	False	NA	NA	False	AATAAA	-22	NA	7048888	7087097	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_7049061_7061346_7061406_7081048_7081214_7085244
H1_mix_00057579	chr21	+	2322	3	FSM	ENSG00000277067.4	ENST00000621909.4	859	3	-31	-1432	-2	0	multi-exon	FALSE	canonical	3	67	junction_1	80	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTGTCTCAAATTACTTT	NA	False	NA	NA	False	AATAAA	-15	NA	7048888	7087229	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_7049061_7081048_7081214_7085244
H1_mix_00057580	chr21	+	593	3	FSM	ENSG00000277067.4	ENST00000622911.1	572	3	-21	0	5	0	multi-exon	FALSE	canonical	0	0	junction_2	5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTCCAAACCTGGACCTT	NA	False	NA	NA	False	NA	NA	NA	7048895	7085500	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_7049061_7080035_7080208_7085244
H1_mix_00057581	chr21	+	2127	3	FSM	ENSG00000276077.4	ENST00000624461.3	994	3	0	-1133	0	0	multi-exon	FALSE	canonical	3	72	junction_1	76	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCTTTGTTTCTACAT	9	False	NA	NA	False	AATAAA	-22	NA	7430729	7468875	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_7430839_7462826_7462992_7467022
H1_mix_00057582	chr21	+	924	4	FSM	ENSG00000273590.5	ENST00000619874.5	870	4	-57	3	-57	-2	multi-exon	FALSE	canonical	3	181	junction_3	18.3726850393609	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCGTGGCCTTTGGAAT	NA	False	NA	NA	False	AATAAA	-18	NA	7744893	7758627	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_7745039_7748898_7748988_7754951_7755119_7758104
H1_mix_00057583	chr21	+	2024	1	FSM	ENSG00000275708.1	ENST00000615959.1	180	1	-1387	-457	-1387	457	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGGCCGGCCCCGGGCCCT	673	False	NA	NA	False	GGGGCT	-12	NA	8207085	8209109	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_8207100_8209100
H1_mix_00057584	chr21	+	840	1	Intergenic	novelGene_810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGCCGCGCCGCGCCGCG	158	False	NA	NA	False	NA	NA	NA	8212725	8213565	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr21_+_8212700_8213600
H1_mix_00057585	chr21	+	1502	1	FSM	ENSG00000286012.1	ENST00000651349.1	312	1	-554	-636	-554	636	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGATTGTGGCTATTTTCC	3568	False	NA	NA	False	ATTAAA	-16	NA	8240181	8241683	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_8240200_8241700
H1_mix_00057586	chr21	+	413	1	Intergenic	novelGene_815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCGGCGGTCGCGGTCCCCC	2147	False	NA	NA	False	NA	NA	NA	8252768	8253181	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr21_+_8252800_8253200
H1_mix_00057587	chr21	+	1859	1	FSM	ENSG00000277739.1	ENST00000610460.1	153	1	-1059	-647	-1059	647	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTACCTCGCCCTCCCCG	311	False	NA	NA	False	NA	NA	NA	8255721	8257580	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_8255700_8257600
H1_mix_00057588	chr21	+	574	1	FSM	ENSG00000275215.1	ENST00000613359.1	153	1	150	-571	150	571	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGGCGTCCGCCGACCGC	154	False	NA	NA	False	NA	NA	NA	8395756	8396330	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_8395800_8396300
H1_mix_00057589	chr21	+	4217	1	Intergenic	novelGene_824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCCTCCGCACGGGTCGA	950	False	NA	NA	False	NA	NA	NA	8398139	8402356	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr21_+_8398100_8402400
H1_mix_00057590	chr21	+	3845	2	Intergenic	novelGene_825	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCGCGCGCGCGCGCGCGT	950	False	NA	NA	False	NA	NA	NA	8398139	8446210	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr21_+_8400251_8444476
H1_mix_00057591	chr21	+	3837	2	Intergenic	novelGene_826	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCGCGCGCGCGCGCGCGT	950	False	NA	NA	False	NA	NA	NA	8398139	8446210	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr21_+_8399100_8443333
H1_mix_00057592	chr21	+	2395	1	FSM	ENSG00000286178.1	ENST00000652229.1	312	1	-1447	-636	-1447	636	mono-exon	FALSE	NA	NA	NA	NA	NA	734	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGATTGTGGCTATTTTCC	3296	False	NA	NA	False	ATTAAA	-16	NA	8422312	8424707	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_8422300_8424700
H1_mix_00057593	chr21	+	5188	1	Intergenic	novelGene_831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGCGCGCGACCCCGGTC	13	False	NA	NA	False	NA	NA	NA	8441155	8446343	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr21_+_8441200_8446300
H1_mix_00057594	chr21	+	2395	1	FSM	ENSG00000286148.1	ENST00000651888.1	312	1	-1447	-636	-1447	636	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGATTGTGGCTATTTTCC	3294	False	NA	NA	False	ATTAAA	-16	NA	8466872	8469267	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_8466900_8469300
H1_mix_00057595	chr21	+	1637	1	FSM	ENSG00000264462.1	ENST00000581792.1	180	1	-298	-1159	-298	1159	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAATACATGCCGACGGGC	NA	False	NA	NA	False	NA	NA	NA	8986700	8988337	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_8986700_8988300
H1_mix_00057596	chr21	+	456	1	FSM	ENSG00000214319.2	ENST00000398098.2	1095	1	404	235	404	-235	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCGCTGCCAGAAGCTGCA	NA	False	NA	NA	False	NA	NA	NA	13676425	13676881	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_13676400_13676900
H1_mix_00057597	chr21	+	998	1	FSM	ENSG00000173231.6	ENST00000311003.6	1181	1	263	-80	263	80	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAAAACTTTTGTTTAA	228	False	NA	NA	False	NA	NA	NA	13776348	13777346	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_13776300_13777300
H1_mix_00057598	chr21	+	811	3	FSM	ENSG00000224905.8	ENST00000448463.3	816	3	5	0	-1	0	multi-exon	FALSE	canonical	2	5	junction_2	40.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAGTCTAAAATGCAGTTT	NA	False	NA	NA	False	NA	NA	NA	14027419	14089046	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_14027598_14083949_14084145_14088608
H1_mix_00057599	chr21	+	1333	3	FSM	ENSG00000224905.8	ENST00000428809.5	1332	3	-1	0	-1	0	multi-exon	FALSE	canonical	3	30	junction_2	28	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTTTTGAGATTCTAAT	NA	False	NA	11	True	AATAAA	-27	NA	14027419	14144468	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_14027598_14083949_14084145_14143508
H1_mix_00057600	chr21	+	1149	3	FSM	ENSG00000224905.8	ENST00000432621.5	1084	3	6	-71	6	71	multi-exon	FALSE	canonical	3	14	junction_2	36	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTTTTAAACCATTACT	-12	True	NA	82	True	AATAAA	-17	NA	14027426	14144539	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_14027598_14083949_14084145_14143756
H1_mix_00057601	chr21	+	1026	4	FSM	ENSG00000224905.8	ENST00000690295.1	905	4	30	-151	24	151	multi-exon	FALSE	canonical	3	8	junction_3	34.8425027803687	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGGTCTCTCTTATCTCTG	6	True	NA	NA	False	AATAAA	-19	NA	14027444	14124775	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_14027598_14083949_14084145_14113338_14113379_14124137
H1_mix_00057602	chr21	+	2011	5	FSM	ENSG00000185272.14	ENST00000468643.5	1992	5	-19	0	-19	0	multi-exon	FALSE	canonical	3	6	junction_1	10.4013220313574	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGTAACTGAATTTTAAT	NA	False	NA	NA	False	AATAAA	-18	NA	14216110	14228372	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_14216283_14219552_14219726_14221096_14221170_14224437_14224538_14226879
H1_mix_00057603	chr21	+	1967	5	FSM	ENSG00000185272.14	ENST00000400577.4	1955	5	-12	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	4.54835134966506	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGTAACTGAATTTTAAT	NA	False	NA	NA	False	AATAAA	-18	NA	14216144	14228372	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_14216283_14219562_14219726_14221096_14221170_14224437_14224538_14226879
H1_mix_00057604	chr21	+	4870	24	NNC	ENSG00000155313.16	novel	5216	25	NA	NA	-58	-346	at_least_one_novel_splicesite	TRUE	canonical	3	13	junction_2	48.8631436288437	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTATGTTTGATACAGCG	NA	False	NA	NA	False	AGTAAA	-17	NA	15729923	15879712	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_+_15730439_15762890_15762969_15766001_15766142_15777903_15778028_15791501_15791665_15799756_15799844_15805120_15805259_15808808_15808886_15811136_15811211_15818697_15818847_15824038_15824167_15824965_15825062_15826203_15826366_15826976_15827204_15830530_15830602_15831400_15831630_15833347_15833549_15842397_15842541_15864267_15864447_15866265_15866345_15870067_15870148_15874402_15874527_15877795_15877992_15878302
H1_mix_00057605	chr21	+	3973	24	FSM	ENSG00000155313.16	ENST00000285679.10	3973	24	0	0	0	0	multi-exon	TRUE	canonical	3	143	junction_14	28.9624618531877	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTGTAAGCAGGTATA	1	True	NA	21	True	AATAAA	-28	NA	15730024	15878911	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_15730439_15762890_15762969_15765996_15766142_15777903_15778028_15791501_15791665_15799756_15799844_15805120_15805259_15808808_15808886_15811136_15811211_15818697_15818847_15824038_15824167_15824965_15825062_15826203_15826366_15826976_15827204_15830530_15830602_15831400_15831630_15833347_15833549_15842397_15842541_15864267_15864447_15866265_15866345_15870067_15870148_15874402_15874527_15877795_15877992_15878302
H1_mix_00057606	chr21	+	555	2	FSM	ENSG00000155313.16	ENST00000464435.1	845	2	223	67	223	-67	multi-exon	FALSE	canonical	3	183	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGAGTACTTTTCCTTAAT	NA	False	NA	NA	False	NA	NA	NA	15799756	15805588	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_15799844_15805120
H1_mix_00057607	chr21	+	5658	7	FSM	ENSG00000154639.19	ENST00000284878.12	5593	7	-65	0	-65	0	multi-exon	FALSE	canonical	3	953	junction_6	125.653513900549	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTCATGGTGTGGC	2	True	NA	2	True	AATAAA	-15	NA	17512977	17570100	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_17513173_17547026_17547194_17551748_17551954_17558975_17559132_17560701_17560825_17561337_17561477_17565427
H1_mix_00057608	chr21	+	1083	5	FSM	ENSG00000154639.19	ENST00000400166.5	1080	5	-3	0	0	0	multi-exon	TRUE	canonical	3	172	junction_4	488.800061374792	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCGAAATAGTTACAGGC	16	True	NA	NA	False	AATATA	-24	NA	17513042	17565852	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_17513173_17547026_17547194_17551748_17551954_17558975_17559132_17565427
H1_mix_00057610	chr21	+	1445	8	FSM	ENSG00000154639.19	ENST00000400169.1	1445	8	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_7	392.467807077009	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTAGTTAAATACATTGA	9	False	NA	-23	True	TTTAAA	-29	NA	17513129	17593579	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_17513173_17547026_17547194_17551748_17551954_17558975_17559132_17560701_17560825_17561337_17561477_17565427_17565612_17593151
H1_mix_00057611	chr21	+	3800	3	FSM	ENSG00000280594.2	ENST00000626994.1	552	3	-183	-3065	-147	3065	multi-exon	FALSE	canonical	1	1	junction_2	0.5	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTTTATTATTTCTC	NA	False	NA	NA	False	AATAAA	-30	NA	17611560	17636264	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_17612088_17626892_17627050_17633148
H1_mix_00057612	chr21	+	2378	7	FSM	ENSG00000154645.14	ENST00000400128.5	2421	7	40	3	40	0	multi-exon	FALSE	canonical	1	6	junction_2	4.41273409829124	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGACTAGTCCTGTCTAA	34	False	NA	7	True	AATAAA	-21	NA	17901302	18267370	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_17901425_17917219_17917401_18256508_18256819_18256969_18257128_18260199_18260287_18262790_18262894_18265953
H1_mix_00057613	chr21	+	498	1	FSM	ENSG00000198618.5	ENST00000358455.4	498	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGACTTGTGTTTTATCT	NA	False	NA	NA	False	NA	NA	NA	18857778	18858276	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_18857800_18858300
H1_mix_00057614	chr21	+	1031	1	FSM	ENSG00000223822.2	ENST00000447052.1	739	1	3	-295	3	295	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTACTATTAGACTTTT	NA	False	NA	126	True	ATTAAA	-17	NA	23390260	23391291	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_23390300_23391300
H1_mix_00057615	chr21	+	665	1	FSM	ENSG00000213885.4	ENST00000425147.1	611	1	-54	0	-54	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCAATAAAGACTGTTAAT	NA	False	NA	NA	False	AATACA	-36	NA	25361766	25362431	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_25361800_25362400
H1_mix_00057616	chr21	+	1679	10	FSM	ENSG00000154721.15	ENST00000400532.5	1757	10	-6	84	-6	-84	multi-exon	FALSE	canonical	3	7	junction_9	15.4919333848297	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCCATCTCAAAAAATAAAAT	5	True	NA	NA	False	NA	NA	NA	25639265	25714489	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_25639889_25683882_25683949_25689865_25689974_25693755_25693909_25698676_25698880_25702169_25702270_25705978_25706087_25709433_25709450_25712339_25712383_25714230
H1_mix_00057617	chr21	+	4358	10	FSM	ENSG00000154721.15	ENST00000480456.6	4351	10	-7	0	-7	0	multi-exon	FALSE	canonical	3	45	junction_7	6.09998988058258	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACTTGTTAAACTTTT	12	False	NA	15	True	AATAAA	-5	NA	25639250	25717562	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_25639889_25683882_25683949_25689865_25689974_25693755_25693909_25698676_25698880_25702169_25702270_25705978_25706087_25709433_25709450_25712339_25712383_25714639
H1_mix_00057618	chr21	+	5120	10	FSM	ENSG00000154727.11	ENST00000354828.7	5120	10	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	46.3755469835633	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGTGTTGCTTAAAA	9916	False	NA	3	True	AATAAA	-15	NA	25734569	25772460	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_25735071_25741572_25741676_25745209_25745355_25749035_25749121_25751988_25752235_25758009_25758205_25762311_25762366_25764209_25764351_25764594_25764788_25769003
H1_mix_00057619	chr21	+	5226	10	FSM	ENSG00000154727.11	ENST00000400075.4	5226	10	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	21.9443741208437	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGTGTTGCTTAAAA	3	True	NA	3	True	AATAAA	-15	NA	25734971	25772460	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_25735579_25741572_25741676_25745209_25745355_25749035_25749121_25751988_25752235_25758009_25758205_25762311_25762366_25764209_25764351_25764594_25764788_25769003
H1_mix_00057620	chr21	+	7346	10	NNC	ENSG00000154727.11	novel	5120	10	NA	NA	1917	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	54.4528338207582	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGTGTTGCTTAAAA	1867	False	NA	3	True	AATAAA	-15	NA	25737305	25772460	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_+_25740033_25741572_25741676_25745209_25745355_25749035_25749121_25751988_25752235_25758009_25758205_25762311_25762366_25764209_25764351_25764594_25764788_25769003
H1_mix_00057621	chr21	+	1209	1	FSM	ENSG00000233783.8	ENST00000596669.1	838	1	282	-653	282	561	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTGTCTCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25934622	25935831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_25934600_25935800
H1_mix_00057622	chr21	+	2942	18	FSM	ENSG00000156256.15	ENST00000399975.7	2960	18	18	0	-4	0	multi-exon	FALSE	canonical	3	32	junction_5	16.4531420206884	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTTTTATTACTGGGAA	-28	True	NA	8	True	AATAAA	-17	NA	29024646	29054488	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_29024778_29027872_29027975_29030594_29030774_29034836_29034941_29036270_29036375_29037278_29037464_29038334_29038431_29039025_29039157_29039480_29039569_29040608_29040688_29042012_29042105_29042471_29042529_29043422_29043600_29046666_29047322_29048760_29048856_29050091_29050179_29053801_29053959_29054065
H1_mix_00057623	chr21	+	2945	18	FSM	ENSG00000156256.15	ENST00000399976.7	2924	18	-21	0	-4	0	multi-exon	FALSE	canonical	3	42	junction_5	14.58467698539	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTTTTATTACTGGGAA	-28	True	NA	8	True	AATAAA	-17	NA	29024646	29054488	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_29024778_29027872_29027975_29030594_29030774_29034836_29034941_29036270_29036375_29037275_29037464_29038334_29038431_29039025_29039157_29039480_29039569_29040608_29040688_29042012_29042105_29042471_29042529_29043422_29043600_29046666_29047322_29048760_29048856_29050091_29050179_29053801_29053959_29054065
H1_mix_00057624	chr21	+	2259	2	FSM	ENSG00000156256.15	ENST00000485067.1	2259	2	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTTTTATTACTGGGAA	NA	False	NA	8	True	AATAAA	-17	NA	29052122	29054488	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_29053959_29054065
H1_mix_00057625	chr21	+	747	1	FSM	ENSG00000236056.1	ENST00000450472.1	937	1	51	139	51	-139	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTCCTCCAACTTTAAC	3006	False	NA	NA	False	NA	NA	NA	29222371	29223118	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_29222400_29223100
H1_mix_00057626	chr21	+	5710	5	FSM	ENSG00000156273.16	ENST00000286800.8	5618	5	-92	0	-92	0	multi-exon	FALSE	canonical	3	86	junction_1	18.8878267675241	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATTGTACATTCCATTT	0	True	NA	14	True	AATAAA	-27	NA	29298829	29346148	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_29298954_29321220_29321515_29326058_29327394_29329486_29329694_29342398
H1_mix_00057627	chr21	+	6020	5	FSM	ENSG00000156273.16	ENST00000399921.5	5769	5	-251	0	243	0	multi-exon	FALSE	canonical	3	39	junction_1	37.9563894489452	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATTGTACATTCCATTT	-30	True	NA	14	True	AATAAA	-27	NA	29299164	29346148	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_29299599_29321220_29321515_29326058_29327394_29329486_29329694_29342398
H1_mix_00057628	chr21	+	6107	5	NIC	ENSG00000156273.16	novel	5769	5	NA	NA	-172	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	48.5257663514962	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATTGTACATTCCATTT	49	False	NA	14	True	AATAAA	-27	NA	29299243	29346148	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_+_29299765_29321220_29321515_29326058_29327394_29329486_29329694_29342398
H1_mix_00057631	chr21	+	822	2	FSM	ENSG00000237594.2	ENST00000433071.2	822	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGGTCTCTTTTCTTTC	2	True	NA	27	True	NA	NA	NA	31559244	31560487	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_31559596_31560016
H1_mix_00057632	chr21	+	895	5	FSM	ENSG00000142168.15	ENST00000270142.11	895	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1068.55542088373	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCTCTGATACTTATTTA	1	True	NA	59	True	ATTAAA	-22	NA	31659692	31668931	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_31659842_31663789_31663887_31666448_31666519_31667257_31667376_31668470
H1_mix_00057633	chr21	+	4004	5	FSM	ENSG00000142168.15	ENST00000470944.1	1746	5	-82	-2176	-39	2176	multi-exon	FALSE	canonical	3	48	junction_1	1047.85718850423	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAATA	4699	False	NA	NA	False	AAAACA	-45	NA	31659626	31671107	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_31660709_31663789_31663887_31666448_31666519_31667257_31667376_31668470
H1_mix_00057634	chr21	+	8038	11	FSM	ENSG00000142149.9	ENST00000270112.7	7680	11	-10	-348	-10	348	multi-exon	FALSE	canonical	3	50	junction_3	6.29364759102383	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATTTCTTAAAATATTT	185	False	NA	NA	False	AATAAA	-2	NA	31873009	32004412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_31873936_31924467_31924761_31940164_31940221_31946035_31946172_31958842_31958971_31968249_31968386_31974554_31974718_31983525_31983610_31990128_31990177_31995767_31995949_31998525
H1_mix_00057635	chr21	+	809	1	FSM	ENSG00000256073.3	ENST00000534991.3	831	1	0	22	0	-22	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGAAAGTAAAAATAAGTAAA	-12	True	NA	NA	False	AATAAA	-2	NA	32393129	32393938	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_32393100_32393900
H1_mix_00057636	chr21	+	1675	8	FSM	ENSG00000166979.13	ENST00000300255.7	1671	8	-4	0	0	0	multi-exon	TRUE	canonical	2	4	junction_1	5.79936660862413	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTCTGTATTTCTTT	15	True	NA	5	True	AATAAA	-17	NA	32412701	32515387	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_32413014_32453311_32453509_32457596_32457721_32467695_32467849_32495026_32495171_32501414_32501496_32503925_32504016_32514813
H1_mix_00057637	chr21	+	1392	9	FSM	ENSG00000159110.21	ENST00000382264.7	1389	9	-3	0	-3	0	multi-exon	FALSE	canonical	3	94	junction_8	19.0455867591419	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACGGACTCTCTCTCTCTT	-47	True	NA	12	True	AATAAA	-19	NA	33229897	33262756	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_33230217_33241885_33241978_33243672_33243715_33244950_33245075_33246717_33246891_33248708_33248855_33252661_33252831_33260596_33260728_33262560
H1_mix_00057638	chr21	+	4284	9	FSM	ENSG00000159110.21	ENST00000404220.7	4284	9	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	34.8207463303129	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGTTGTCTTCCATTGG	26	True	NA	26	True	AATACA	-14	NA	33229970	33265675	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_33230217_33241839_33241978_33243672_33243715_33244950_33245075_33246717_33246891_33248708_33248855_33252661_33252831_33260596_33260728_33262560
H1_mix_00057639	chr21	+	2009	7	FSM	ENSG00000243646.10	ENST00000290200.7	1941	7	20	-88	5	88	multi-exon	FALSE	canonical	3	25	junction_6	5.64702478203247	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTAGACCCTGCCTGCTG	9	True	NA	106	True	AAAAAG	-43	NA	33266386	33297309	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_33266515_33268393_33268518_33276595_33276754_33279751_33279919_33283093_33283242_33288103_33288262_33296183
H1_mix_00057640	chr21	+	762	1	Genic_Genomic	ENSG00000142166.13	novel	NA	NA	NA	NA	-288	-18702	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAGAGGCGGCGCGTGCG	NA	False	NA	NA	False	NA	NA	NA	33324140	33324902	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr21_+_33324100_33324900
H1_mix_00057642	chr21	+	6085	11	FSM	ENSG00000142166.13	ENST00000270139.8	6075	11	-10	0	-10	0	multi-exon	FALSE	canonical	3	152	junction_10	15.0253119767944	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTCTCACTACCTTTT	-33	True	NA	NA	False	AAGAAA	-42	NA	33324959	33359864	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_33325132_33335523_33335648_33340998_33341175_33343267_33343423_33343534_33343677_33345245_33345361_33349090_33349291_33349388_33349544_33352757_33352909_33353637_33353784_33355315
H1_mix_00057644	chr21	+	1699	7	FSM	ENSG00000159128.15	ENST00000290219.11	1699	7	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_5	22.2442252181449	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTATGTGAAGTGTTTTCT	-16	True	NA	21	True	AATAAA	-27	NA	33403412	33437516	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_33403617_33414887_33415021_33421479_33421686_33426883_33427033_33432176_33432337_33432713_33432872_33436827
H1_mix_00057646	chr21	+	7936	5	FSM	ENSG00000159140.21	ENST00000381679.8	7860	5	-76	0	-49	0	multi-exon	FALSE	canonical	3	110	junction_4	438.53648650939	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCAGCCAGAGTGTGTTT	541	False	NA	9	True	AATAAA	-15	NA	33542988	33559056	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_33543170_33546212_33546380_33549475_33555392_33557155_33557317_33557545
H1_mix_00057647	chr21	+	7503	7	FSM	ENSG00000159140.21	ENST00000300278.8	7477	7	-26	0	0	0	multi-exon	FALSE	canonical	3	94	junction_6	366.525578916397	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTGTGCAAAATCACGC	-24	True	NA	13	True	AATAAA	-19	NA	33543037	33560667	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_33543170_33546212_33546380_33549475_33555392_33557155_33557317_33559229_33559377_33559586_33559776_33559876
H1_mix_00057648	chr21	+	8396	12	FSM	ENSG00000159140.21	ENST00000356577.10	8393	12	-3	0	-3	0	multi-exon	FALSE	canonical	3	251	junction_11	238.899923720622	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTGTTTTATTTTCTGG	-27	True	NA	15	True	AATAAA	-1	NA	33543034	33577481	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_33543170_33546212_33546380_33549475_33555392_33557155_33557317_33559229_33559377_33559586_33559776_33567156_33567268_33568970_33569088_33573307_33573456_33575595_33575668_33575777_33575894_33576364
H1_mix_00057649	chr21	+	5269	10	FSM	ENSG00000159140.21	ENST00000436227.5	5269	10	0	0	0	0	multi-exon	FALSE	canonical	3	548	junction_9	105.209843223489	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTGTTTTATTTTCTGG	2747	False	NA	15	True	AATAAA	-1	NA	33552247	33577481	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_33555392_33557155_33557317_33559229_33559377_33559586_33559776_33567156_33567268_33568970_33569088_33573307_33573456_33575595_33575668_33575777_33575894_33576417
H1_mix_00057650	chr21	+	1151	5	FSM	ENSG00000159140.21	ENST00000421541.1	1151	5	0	0	0	0	multi-exon	FALSE	canonical	3	727	junction_3	70.3846574190711	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGCAGGAACTGTTTCTT	2752	False	NA	NA	False	AATAAA	-17	NA	33555048	33567467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_33555392_33557155_33557317_33559229_33559377_33559586_33559776_33567156
H1_mix_00057652	chr21	+	3141	4	FSM	ENSG00000159140.21	ENST00000491794.1	995	4	-189	-1957	0	1458	multi-exon	FALSE	canonical	3	548	junction_3	129.399467627275	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCTGGCCAACATGGTGA	239	False	NA	NA	False	NA	NA	NA	33573024	33578939	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_33573456_33575595_33575668_33575777_33575894_33576417
H1_mix_00057653	chr21	+	5242	27	FSM	ENSG00000205726.15	ENST00000399349.5	5191	27	-49	-2	-3	0	multi-exon	FALSE	canonical	3	78	junction_23	76.100768216076	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGAAATGTCTCTGTGTT	-5	True	NA	19	True	ATTAAA	-19	NA	33642448	33838498	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_33642714_33718796_33718857_33721177_33721271_33722587_33722652_33735043_33735205_33750142_33750323_33751809_33751907_33755296_33755398_33761922_33761987_33765874_33766013_33767712_33767829_33772060_33772324_33774728_33774879_33774967_33775109_33781460_33781549_33781993_33782134_33794340_33794469_33797378_33797609_33799807_33799930_33810974_33811223_33813912_33814073_33818266_33818473_33819240_33819324_33829623_33829746_33834306_33834425_33836440_33836633_33836986
H1_mix_00057654	chr21	+	5453	29	FSM	ENSG00000205726.15	ENST00000399352.5	5408	29	-47	2	-3	0	multi-exon	FALSE	canonical	3	306	junction_23	49.8538041248036	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGGAAATGTCTCTGTG	-5	True	NA	17	True	ATTAAA	-17	NA	33642448	33838496	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_33642714_33718796_33718857_33721177_33721271_33722587_33722652_33735043_33735205_33750142_33750323_33751809_33751907_33755296_33755398_33761922_33761987_33765874_33766013_33767712_33767829_33772060_33772324_33774728_33774879_33774967_33775109_33781460_33781549_33781993_33782134_33794340_33794469_33797378_33797609_33799807_33799930_33810974_33811223_33813912_33814073_33818266_33818473_33819240_33819324_33823486_33823654_33826817_33826864_33829623_33829746_33834306_33834425_33836440_33836633_33836986
H1_mix_00057655	chr21	+	3115	21	FSM	ENSG00000205726.15	ENST00000399338.8	3115	21	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_20	93.0318628212937	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTGTGGTTAATAAAGT	11	False	NA	-17	True	NA	NA	NA	33718809	33817614	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_33718857_33721177_33721271_33722587_33722652_33735043_33735205_33750142_33750323_33751809_33751907_33755296_33755398_33761922_33761987_33765874_33766013_33767712_33767829_33772060_33772324_33774728_33774879_33774967_33775109_33781460_33781549_33781993_33782134_33794340_33794469_33797378_33797609_33799807_33799930_33810974_33811223_33813912_33814073_33817230
H1_mix_00057657	chr21	+	752	2	FSM	ENSG00000237945.8	ENST00000599421.1	728	2	-24	0	-21	0	multi-exon	FALSE	canonical	3	20	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTGAAGTTTTTCTTT	NA	False	NA	23	True	ATTAAA	-16	NA	33931138	33938372	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_33931743_33938224
H1_mix_00057658	chr21	+	11725	2	FSM	ENSG00000198743.7	ENST00000381151.5	11566	2	-159	0	-159	0	multi-exon	TRUE	canonical	3	29	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTGTGACTAAGTATT	212	False	NA	12	True	AATAAA	-13	NA	34073418	34106260	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_34073746_34094862
H1_mix_00057659	chr21	+	1102	5	FSM	ENSG00000243927.6	ENST00000477091.5	1061	5	-45	4	-45	0	multi-exon	FALSE	canonical	3	16	junction_1	566.922393277951	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGAGGTGTTTTGTCCC	297	False	NA	15	True	AATAAA	-15	NA	34073503	34143030	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_34073746_34102834_34102909_34103496_34103520_34125340_34125481_34142407
H1_mix_00057660	chr21	+	931	3	FSM	ENSG00000243927.6	ENST00000399312.3	931	3	0	0	0	0	multi-exon	FALSE	canonical	3	1362	junction_2	2.5	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGAGGTGTTTTGTCCC	21	True	NA	15	True	AATAAA	-15	NA	34073577	34143030	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_34073746_34125340_34125481_34142407
H1_mix_00057661	chr21	+	6342	2	FSM	ENSG00000243927.6	ENST00000483977.5	3934	2	-2412	4	-2412	0	multi-exon	FALSE	canonical	3	1362	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGAGGTGTTTTGTCCC	7899	False	NA	15	True	AATAAA	-15	NA	34119761	34143030	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_34125481_34142407
H1_mix_00057662	chr21	+	834	2	FSM	ENSG00000159197.4	ENST00000290310.4	1061	2	0	227	0	-227	multi-exon	FALSE	canonical	3	5	junction_1	0	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGGCTGTGGGGATAGAA	-4	True	NA	NA	False	AATAAA	-27	NA	34364005	34371154	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_34364152_34370466
H1_mix_00057663	chr21	+	919	4	FSM	ENSG00000205670.12	ENST00000399292.8	840	4	-79	0	-52	0	multi-exon	FALSE	canonical	3	181	junction_3	18.3726850393609	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCGTGGCCTTTGGAAT	NA	False	NA	NA	False	AATAAA	-18	NA	34375427	34389151	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_34375568_34379427_34379517_34385477_34385645_34388628
H1_mix_00057664	chr21	+	4197	6	FSM	ENSG00000159212.13	ENST00000349499.3	4197	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.93907194296653	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATTTCTTTTGGGTTTTA	-17	True	NA	9	True	TATAAA	-16	NA	34668993	34718223	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_34670763_34707279_34707390_34707943_34708070_34708699_34708807_34709356_34709539_34716320
H1_mix_00057665	chr21	+	1947	3	FSM	ENSG00000234380.2	ENST00000420877.1	2632	3	55	630	-25	-630	multi-exon	FALSE	canonical	3	27	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCATCTTACCATGATTT	-11	True	NA	NA	False	NA	NA	NA	34745811	34784256	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_34746017_34782124_34782191_34782580
H1_mix_00057666	chr21	+	688	2	FSM	ENSG00000234380.2	ENST00000419921.1	767	2	0	79	0	-79	multi-exon	FALSE	canonical	3	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGCTCTTTTGGTTACA	14	True	NA	NA	False	NA	NA	NA	34745836	34748288	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_34746017_34747780
H1_mix_00057667	chr21	+	686	1	FSM	ENSG00000189089.5	ENST00000408914.2	1164	1	140	338	140	-338	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTGAGGCCAATGCAAAT	NA	False	NA	NA	False	NA	NA	NA	36050353	36051039	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_36050400_36051000
H1_mix_00057668	chr21	+	1232	3	FSM	ENSG00000159228.13	ENST00000290349.11	1208	3	-26	2	-17	-2	multi-exon	FALSE	canonical	2	15	junction_2	2.5	2645	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCATTTGTACAGATTGT	5	True	NA	29	True	AATAAA	-15	NA	36069997	36073162	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_36070405_36070949_36071058_36072445
H1_mix_00057669	chr21	+	2336	2	FSM	ENSG00000233393.2	ENST00000422473.1	2336	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCAGTGTCTGAGGAGTT	8	False	NA	12	True	AGTAAA	-15	NA	36104880	36109690	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_36105124_36107597
H1_mix_00057670	chr21	+	2988	2	FSM	ENSG00000233393.2	ENST00000685204.1	502	2	-11	-2475	0	636	multi-exon	FALSE	canonical	3	46	junction_1	0	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCACCGAAACTTTATTTAT	8	False	NA	NA	False	ATTAAA	-36	NA	36104880	36110326	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_36105124_36107581
H1_mix_00057671	chr21	+	998	3	FSM	ENSG00000159231.6	ENST00000290354.6	998	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTGATGCTGTGGTTTG	-3	True	NA	12	True	AATAAA	-20	NA	36135078	36146562	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_36135482_36137824_36137933_36146075
H1_mix_00057672	chr21	+	634	4	ISM	ENSG00000142197.13	ENST00000693273.1	7053	34	-11	93411	-11	-11603	5prime_fragment	FALSE	canonical	3	19	junction_1	5.35412613473634	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTCATCGTGGGCCTGCT	-26	True	NA	NA	False	NA	NA	NA	36156770	36200445	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr21_+_36156944_36164707_36164872_36199069_36199252_36200330
H1_mix_00057673	chr21	+	7778	37	FSM	ENSG00000142197.13	ENST00000691173.1	7746	37	-53	21	-11	-21	multi-exon	FALSE	canonical	3	10	junction_26	6.63063177817753	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTATTTTTAACCTTTC	-26	True	NA	-10	True	ATTAAA	-3	NA	36156770	36294253	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_36156944_36164707_36164872_36199069_36199252_36200330_36200502_36208714_36208905_36211552_36211652_36211973_36212098_36214080_36214191_36214441_36214557_36219371_36219493_36223230_36223351_36225564_36225668_36227685_36227878_36230449_36231135_36232803_36233076_36237261_36237415_36238600_36238702_36239764_36239956_36245047_36246678_36247516_36247629_36248379_36248569_36251161_36251285_36253771_36253910_36260676_36260733_36263545_36263651_36263747_36263815_36270012_36270158_36277020_36277101_36277974_36278085_36278208_36278356_36280284_36280347_36281482_36281612_36288013_36288151_36288755_36288812_36289044_36289207_36292103_36292234_36293319
H1_mix_00057675	chr21	+	4236	17	FSM	ENSG00000159256.13	ENST00000400485.6	4224	17	-12	0	-4	0	multi-exon	TRUE	canonical	0	0	junction_4	22.1016826282525	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTCAAATGCTACTTTTA	-37	True	NA	15	True	AATAAA	-22	NA	36320184	36376632	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_36320304_36333645_36333719_36336873_36337007_36337731_36337947_36338773_36338922_36341398_36341547_36344578_36344708_36344911_36345032_36349310_36349409_36356619_36356725_36359954_36360078_36360183_36360259_36362182_36362229_36364092_36364260_36368987_36369877_36372373_36372532_36375142
H1_mix_00057676	chr21	+	4466	14	FSM	ENSG00000159259.8	ENST00000314103.6	4466	14	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_11	29.1086517974889	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAGTGTCATAGTCTAAA	-10	True	NA	16	True	AATAAA	-17	NA	36385391	36419015	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_36385452_36386059_36386263_36387597_36387731_36391550_36391669_36394546_36394651_36397414_36397512_36399520_36399606_36402757_36402852_36408760_36408831_36409373_36409466_36411462_36411605_36412883_36413316_36415294_36415390_36416274
H1_mix_00057678	chr21	+	2411	4	FSM	ENSG00000183145.9	ENST00000485272.5	2005	4	-403	-3	-403	0	multi-exon	FALSE	canonical	3	14	junction_1	33.7934904974316	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGATAATCACCCTTTT	NA	False	NA	17	True	AATAAA	-14	NA	37005746	37019662	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_37006234_37008156_37008224_37013550_37013619_37017873
H1_mix_00057679	chr21	+	2515	4	FSM	ENSG00000183145.9	ENST00000329553.3	2099	4	-419	3	81	0	multi-exon	FALSE	canonical	3	77	junction_2	7.87400787401181	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTTTGATAATCACCCT	NA	False	NA	14	True	AATAAA	-11	NA	37006282	37019659	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_37006877_37008156_37008224_37013550_37013619_37017873
H1_mix_00057680	chr21	+	2411	11	FSM	ENSG00000182670.13	ENST00000399010.5	2115	11	-89	-207	-25	207	multi-exon	FALSE	canonical	3	15	junction_10	58.8561806440071	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGTAAAACCATCACAACTAC	NA	False	NA	NA	False	NA	NA	NA	37073200	37099305	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_37073365_37087246_37087402_37087832_37087876_37088195_37088347_37088798_37088887_37090232_37090287_37091292_37091414_37094004_37094091_37095349_37095445_37096580_37096644_37097914
H1_mix_00057681	chr21	+	7035	37	NIC	ENSG00000182670.13	novel	7712	46	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	97	junction_1	62.4601292579	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTTCACTGTCACTCTT	NA	False	NA	13	True	AATAAA	-16	NA	37073200	37203103	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_+_37073474_37108391_37108447_37121816_37121980_37122982_37123029_37124618_37124743_37126079_37126144_37129002_37129064_37132681_37132767_37135379_37135515_37138633_37138715_37140560_37140674_37144524_37144646_37147480_37147604_37148545_37148648_37150077_37150171_37150819_37150885_37151892_37152030_37152950_37153278_37156654_37156907_37159698_37159746_37160801_37160859_37161989_37162064_37164050_37164216_37165549_37166616_37167554_37167621_37172594_37172745_37182773_37182914_37185705_37185775_37187048_37187146_37188494_37188596_37191333_37191425_37192111_37192214_37195674_37196037_37197569_37197697_37197881_37198026_37200231_37200325_37201439
H1_mix_00057684	chr21	+	7732	46	FSM	ENSG00000182670.13	ENST00000355666.5	7712	46	-20	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	113.952738741404	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTTCACTGTCACTCTT	-17	True	NA	13	True	AATAAA	-16	NA	37073250	37203103	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_37073365_37087246_37087402_37087832_37087876_37088195_37088347_37088798_37088887_37090232_37090287_37091292_37091414_37094004_37094091_37095349_37095445_37096580_37096644_37108391_37108447_37121816_37121980_37122982_37123029_37124618_37124743_37126079_37126144_37129002_37129064_37132681_37132767_37135379_37135515_37138633_37138715_37140560_37140674_37144524_37144646_37147480_37147604_37148545_37148648_37150077_37150171_37150819_37150885_37151892_37152030_37152950_37153278_37156654_37156907_37159698_37159746_37160801_37160859_37161989_37162064_37164050_37164216_37165549_37166616_37167554_37167621_37172594_37172745_37182773_37182914_37185705_37185775_37187048_37187146_37188494_37188596_37191333_37191425_37192111_37192214_37195674_37196037_37197569_37197697_37197881_37198026_37200231_37200325_37201439
H1_mix_00057687	chr21	+	6847	37	NIC	ENSG00000182670.13	novel	7712	46	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	171	junction_1	52.7415884698308	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTTCACTGTCACTCTT	12	True	NA	13	True	AATAAA	-16	NA	37073279	37203103	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_+_37073365_37108391_37108447_37121816_37121980_37122982_37123029_37124618_37124743_37126079_37126144_37129002_37129064_37132681_37132767_37135379_37135515_37138633_37138715_37140560_37140674_37144524_37144646_37147480_37147604_37148545_37148648_37150077_37150171_37150819_37150885_37151892_37152030_37152950_37153278_37156654_37156907_37159698_37159746_37160801_37160859_37161989_37162064_37164050_37164216_37165549_37166616_37167554_37167621_37172594_37172745_37182773_37182914_37185705_37185775_37187048_37187146_37188494_37188596_37191333_37191425_37192111_37192214_37195674_37196037_37197569_37197697_37197881_37198026_37200231_37200325_37201439
H1_mix_00057688	chr21	+	7719	45	NIC	ENSG00000182670.13	novel	7712	46	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_7	120.303118798151	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTTCACTGTCACTCTT	19	True	NA	13	True	AATAAA	-16	NA	37073286	37203103	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_+_37073474_37087246_37087402_37087832_37087876_37088195_37088347_37088798_37088887_37090232_37090287_37091292_37091414_37095349_37095445_37096580_37096644_37108391_37108447_37121816_37121980_37122982_37123029_37124618_37124743_37126079_37126144_37129002_37129064_37132681_37132767_37135379_37135515_37138633_37138715_37140560_37140674_37144524_37144646_37147480_37147604_37148545_37148648_37150077_37150171_37150819_37150885_37151892_37152030_37152950_37153278_37156654_37156907_37159698_37159746_37160801_37160859_37161989_37162064_37164050_37164216_37165549_37166616_37167554_37167621_37172594_37172745_37182773_37182914_37185705_37185775_37187048_37187146_37188494_37188596_37191333_37191425_37192111_37192214_37195674_37196037_37197569_37197697_37197881_37198026_37200231_37200325_37201439
H1_mix_00057689	chr21	+	7840	47	NIC	ENSG00000182670.13	novel	7712	46	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_29	127.680486805052	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTTCACTGTCACTCTT	38	False	NA	13	True	AATAAA	-16	NA	37073305	37203103	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_+_37073474_37087246_37087402_37087832_37087876_37088195_37088347_37088798_37088887_37090232_37090287_37091292_37091414_37094004_37094091_37095349_37095445_37096580_37096644_37108391_37108447_37121816_37121980_37122982_37123029_37124618_37124743_37126079_37126144_37129002_37129064_37132681_37132767_37135379_37135515_37138633_37138715_37140560_37140674_37144524_37144646_37147480_37147604_37148545_37148648_37150077_37150171_37150819_37150885_37151892_37152030_37152950_37153278_37156654_37156907_37157160_37157215_37159698_37159746_37160801_37160859_37161989_37162064_37164050_37164216_37165549_37166616_37167554_37167621_37172594_37172745_37182773_37182914_37185705_37185775_37187048_37187146_37188494_37188596_37191333_37191425_37192111_37192214_37195674_37196037_37197569_37197697_37197881_37198026_37200231_37200325_37201439
H1_mix_00057691	chr21	+	12387	46	FSM	ENSG00000182670.13	ENST00000399017.6	10363	46	-2033	9	-2033	0	multi-exon	FALSE	canonical	3	58	junction_1	112.929861331036	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTTCACTGTCACTCTT	10	False	NA	13	True	AATAAA	-16	NA	37079562	37203103	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_37084332_37087246_37087402_37087832_37087876_37088195_37088347_37088798_37088887_37090232_37090287_37091292_37091414_37094004_37094091_37095349_37095445_37096580_37096644_37108391_37108447_37121816_37121980_37122982_37123029_37124618_37124743_37126079_37126144_37129002_37129064_37132681_37132767_37135379_37135515_37138633_37138715_37140560_37140674_37144524_37144646_37147480_37147604_37148545_37148648_37150077_37150171_37150819_37150885_37151892_37152030_37152950_37153278_37156654_37156907_37159698_37159746_37160801_37160859_37161989_37162064_37164050_37164216_37165549_37166616_37167554_37167621_37172594_37172745_37182773_37182914_37185705_37185775_37187048_37187146_37188494_37188596_37191333_37191425_37192111_37192214_37195674_37196037_37197569_37197697_37197881_37198026_37200231_37200325_37201439
H1_mix_00057692	chr21	+	8830	44	FSM	ENSG00000182670.13	ENST00000479930.5	8998	44	168	0	168	0	multi-exon	FALSE	canonical	3	14	junction_6	112.707339131989	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCACTCTTGTCCATTCT	254	False	NA	22	True	AATAAA	-25	NA	37085957	37203112	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_37087402_37087832_37087876_37088195_37088347_37088798_37088887_37090232_37090287_37091292_37091414_37095349_37095445_37096580_37096644_37108391_37108447_37121816_37121980_37122982_37123029_37124618_37124743_37126079_37126144_37129002_37129064_37132681_37132767_37135379_37135515_37138633_37138715_37140560_37140674_37144524_37144646_37147480_37147604_37148545_37148648_37150077_37150171_37150819_37150885_37151892_37152030_37152950_37153278_37156654_37156907_37159698_37159746_37160801_37160859_37161989_37162064_37164050_37164216_37165549_37166616_37167554_37167621_37172594_37172745_37182773_37182914_37185705_37185775_37187048_37187146_37188494_37188596_37191333_37191425_37192111_37192214_37195674_37196037_37197569_37197697_37197881_37198026_37200231_37200325_37201439
H1_mix_00057695	chr21	+	7437	36	FSM	ENSG00000182670.13	ENST00000476784.5	7425	36	-12	0	-12	0	multi-exon	FALSE	canonical	3	326	junction_18	34.9193122404629	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCACTCTTGTCCATTCT	633	False	NA	22	True	AATAAA	-25	NA	37107725	37203112	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_37108447_37121816_37121980_37122982_37123029_37124618_37124743_37126079_37126144_37129002_37129064_37132681_37132767_37135379_37135515_37138633_37138715_37140560_37140674_37144524_37144646_37147480_37147604_37148545_37148648_37150077_37150171_37150819_37150885_37151892_37152030_37152950_37153278_37156654_37156907_37159698_37159746_37160801_37160859_37161989_37162064_37164050_37164216_37165549_37166616_37167554_37167621_37172594_37172745_37182773_37182914_37185705_37185775_37187048_37187146_37188494_37188596_37191333_37191425_37192111_37192214_37195674_37196037_37197569_37197697_37197881_37198026_37200231_37200325_37201439
H1_mix_00057698	chr21	+	854	1	FSM	ENSG00000272948.2	ENST00000608405.2	714	1	-180	40	-180	-40	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAATTAAATAATGCGGTG	NA	False	NA	NA	False	NA	NA	NA	37267603	37268457	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_37267600_37268500
H1_mix_00057699	chr21	+	16694	12	FSM	ENSG00000157540.22	ENST00000647188.2	17024	12	0	330	0	-330	multi-exon	FALSE	canonical	0	0	junction_2	3.84406809306654	1171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTCAAGAAGAACTATTG	-3	True	NA	NA	False	GATAAA	-36	NA	37366772	37526028	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_37367629_37420298_37420385_37472683_37472881_37478207_37478301_37480637_37480827_37486466_37486615_37490174_37490462_37493016_37493164_37496117_37496259_37505282_37505590_37506098_37506224_37511910
H1_mix_00057700	chr21	+	3668	10	FSM	ENSG00000157557.13	ENST00000360938.8	3668	10	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_5	24.569377708596	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGTGATAGTCCTCGT	-2	True	NA	66	True	AATAAA	-19	NA	38805928	38824955	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_38806121_38810034_38810107_38813002_38813115_38814272_38814393_38814780_38814982_38817007_38817092_38818424_38818647_38819502_38819767_38821585_38821705_38822673
H1_mix_00057701	chr21	+	1152	1	FSM	ENSG00000255568.3	ENST00000603064.2	1028	1	-110	-14	-110	14	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCTTTTATTTACACCAA	NA	False	NA	NA	False	AATGAA	-38	NA	39313824	39314976	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_39313800_39315000
H1_mix_00057702	chr21	+	1555	5	FSM	ENSG00000182093.16	ENST00000649170.1	1534	5	-22	1	-22	0	multi-exon	FALSE	canonical	3	278	junction_1	97.8554418517437	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCTGCAAGTTCATATT	-34	True	NA	15	True	AGTAAA	-17	NA	39380303	39397888	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_39380487_39390697_39390864_39391768_39391837_39393165_39393281_39396865
H1_mix_00057703	chr21	+	1334	9	FSM	ENSG00000285815.1	ENST00000647779.1	1328	9	-6	0	-6	0	multi-exon	FALSE	canonical	3	8	junction_3	136.757026784732	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTCCCAAGGAGCATCA	-12	True	NA	20	True	AATAAA	-17	NA	39380325	39515506	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_39380487_39390697_39390864_39391768_39391837_39462374_39462561_39475134_39475216_39499822_39499916_39508997_39509028_39511679_39511810_39515087
H1_mix_00057704	chr21	+	1480	5	FSM	ENSG00000182093.16	ENST00000380708.5	1464	5	-16	0	-16	0	multi-exon	FALSE	canonical	3	171	junction_1	143.678460459458	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGCAAGTTCATATTT	7276	False	NA	16	True	AGTAAA	-18	NA	39387748	39397889	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_39387856_39390697_39390864_39391768_39391837_39393165_39393281_39396865
H1_mix_00057705	chr21	+	1151	7	FSM	ENSG00000185437.15	ENST00000380631.5	780	7	-74	-297	3	0	multi-exon	FALSE	canonical	3	7	junction_1	37.4477413649119	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTGTCCCAAGGAGCAT	28	False	NA	18	True	AATAAA	-15	NA	39445867	39515504	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_39446082_39462374_39462561_39475134_39475216_39499822_39499916_39508997_39509028_39511679_39511810_39515087
H1_mix_00057707	chr21	+	1109	7	FSM	ENSG00000185437.15	ENST00000333634.10	1109	7	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	13.6341075574784	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTGTCCCAAGGAGCAT	0	True	NA	18	True	AATAAA	-15	NA	39451969	39515504	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_39452142_39462374_39462561_39475134_39475216_39499822_39499916_39508997_39509028_39511679_39511810_39515087
H1_mix_00057709	chr21	+	4856	5	NNC	ENSG00000183778.19	novel	13097	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	12.0830459735946	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTTCTGACTTAATC	-1	True	NA	24	True	AATAAA	-14	NA	39612939	39673137	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_+_39613068_39646391_39646623_39659752_39659913_39660559_39663617_39671857
H1_mix_00057710	chr21	+	13097	4	FSM	ENSG00000183778.19	ENST00000684187.2	13097	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	8.9938250421547	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTTCTGACTTAATC	-1	True	NA	24	True	AATAAA	-14	NA	39612939	39673137	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_39613068_39646391_39646623_39659752_39659913_39660559
H1_mix_00057711	chr21	+	534	3	FSM	ENSG00000183036.11	ENST00000328619.10	534	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	2	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAGTGACTGCCTTTCTT	6	True	NA	8	True	AATAAA	-21	NA	39867437	39929392	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_39867511_39898475_39898528_39928983
H1_mix_00057712	chr21	+	8542	9	FSM	ENSG00000182240.16	ENST00000330333.11	8567	9	0	25	0	-13	multi-exon	FALSE	canonical	3	34	junction_3	5.60691537300145	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATTTGAATAAATAATACT	-2	True	NA	NA	False	AATAAA	-11	NA	41168159	41282505	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_41168576_41226265_41226355_41237512_41237730_41241818_41241948_41243375_41243511_41245961_41246064_41250751_41250902_41257157_41257327_41275370
H1_mix_00057714	chr21	+	815	7	FSM	ENSG00000183844.17	ENST00000398647.7	864	7	0	49	0	-49	multi-exon	FALSE	canonical	1	1	junction_1	2.40947204913349	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAAGATGTCAATTAGCA	13	True	NA	45	True	NA	NA	NA	41316813	41357382	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_41316899_41338377_41338502_41344475_41344535_41345685_41345737_41347012_41347101_41348591_41348725_41357107
H1_mix_00057715	chr21	+	2826	16	FSM	ENSG00000157601.15	ENST00000681849.1	3251	16	0	425	0	0	multi-exon	TRUE	canonical	0	0	junction_1	4.60241482509152	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCTCTGCCATGTTTTG	3335	False	NA	16	True	AATAAA	-16	NA	41426089	41459212	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_41426264_41427754_41427867_41430532_41430609_41432049_41432176_41435836_41436030_41437014_41437153_41439693_41439849_41440886_41441026_41441715_41441915_41443787_41443867_41445447_41445571_41445999_41446142_41449136_41449296_41451166_41451244_41452620_41452870_41458527
H1_mix_00057716	chr21	+	1325	1	FSM	ENSG00000237232.9	ENST00000675924.1	2109	1	768	16	327	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTGCCAAATTAACAGC	NA	False	NA	-8	True	ATTAAA	-3	NA	42010257	42011582	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_42010300_42011600
H1_mix_00057717	chr21	+	2990	15	FSM	ENSG00000160179.19	ENST00000398449.8	2976	15	-14	0	8	0	multi-exon	FALSE	canonical	3	14	junction_9	5.47955383257448	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGACTACCTTTAATT	-10	True	NA	31	True	AATATA	-19	NA	42219125	42297244	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_42219305_42225670_42225915_42271069_42271188_42273302_42273436_42276894_42276946_42282273_42282420_42284559_42284684_42285879_42285995_42287888_42288038_42288210_42288313_42290049_42290219_42291091_42291193_42291497_42291657_42294541_42294661_42296163
H1_mix_00057718	chr21	+	3195	15	FSM	ENSG00000160179.19	ENST00000361802.6	3034	15	8	-169	8	169	multi-exon	FALSE	canonical	3	14	junction_9	5.47955383257448	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGGGCTAACTGTGCAA	-10	True	NA	NA	False	NA	NA	NA	42219125	42297413	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_42219305_42225670_42225915_42271069_42271188_42273302_42273436_42276894_42276946_42282273_42282420_42284559_42284684_42285879_42285995_42287888_42288074_42288210_42288313_42290049_42290219_42291091_42291193_42291497_42291657_42294541_42294661_42296163
H1_mix_00057719	chr21	+	3225	22	NIC	ENSG00000160190.14	novel	3712	20	NA	NA	-153	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_7	57.1016518102216	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCAGAACACTCAGAGAAT	NA	False	NA	6	True	AATAAA	-19	NA	42513698	42581426	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_+_42513925_42514630_42514718_42514869_42514936_42518276_42518511_42525775_42525858_42534697_42534831_42535471_42535551_42539511_42539648_42542403_42542481_42543435_42543603_42547102_42547141_42554061_42554143_42558957_42559090_42562077_42562169_42563814_42563878_42564707_42564794_42565826_42565876_42566984_42567059_42568359_42568439_42574817_42574916_42579735_42579801_42580344
H1_mix_00057720	chr21	+	3046	20	NIC	ENSG00000160190.14	novel	3712	20	NA	NA	-127	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	48.3923255745706	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCAGAACACTCAGAGAAT	NA	False	NA	6	True	AATAAA	-19	NA	42513724	42581426	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_+_42513925_42518276_42518511_42525775_42525858_42534697_42534831_42535471_42535551_42539511_42539648_42542403_42542481_42543435_42543603_42547102_42547141_42554061_42554143_42558957_42559090_42562077_42562169_42563814_42563878_42564707_42564794_42565826_42565876_42566984_42567059_42568359_42568439_42574817_42574916_42579735_42579801_42580344
H1_mix_00057721	chr21	+	3060	21	NIC	ENSG00000160190.14	novel	3712	20	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	53.8283150395775	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCAGAACACTCAGAGAAT	NA	False	NA	6	True	AATAAA	-19	NA	42513797	42581426	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_+_42513925_42514630_42514718_42518276_42518511_42525775_42525858_42534697_42534831_42535471_42535551_42539511_42539648_42542403_42542481_42543435_42543603_42547102_42547141_42554061_42554143_42558957_42559090_42562077_42562169_42563814_42563878_42564707_42564794_42565826_42565876_42566984_42567059_42568359_42568439_42574817_42574916_42579735_42579801_42580344
H1_mix_00057722	chr21	+	3127	21	NIC	ENSG00000160190.14	novel	3712	20	NA	NA	-142	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	56.872203227939	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCAGAACACTCAGAGAAT	NA	False	NA	6	True	AATAAA	-19	NA	42513709	42581426	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_+_42513925_42514869_42514936_42518276_42518511_42525775_42525858_42534697_42534831_42535471_42535551_42539511_42539648_42542403_42542481_42543435_42543603_42547102_42547141_42554061_42554143_42558957_42559090_42562077_42562169_42563814_42563878_42564707_42564794_42565826_42565876_42566984_42567059_42568359_42568439_42574817_42574916_42579735_42579801_42580344
H1_mix_00057723	chr21	+	3854	20	FSM	ENSG00000160190.14	ENST00000352133.3	3712	20	-142	0	-142	0	multi-exon	FALSE	canonical	0	0	junction_5	50.205781525786	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCAGAACACTCAGAGAAT	NA	False	NA	6	True	AATAAA	-19	NA	42513709	42581426	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_42514718_42518276_42518511_42525775_42525858_42534697_42534831_42535471_42535551_42539511_42539648_42542403_42542481_42543435_42543603_42547102_42547141_42554061_42554143_42558957_42559090_42562077_42562169_42563814_42563878_42564707_42564794_42565826_42565876_42566984_42567059_42568359_42568439_42574817_42574916_42579735_42579801_42580344
H1_mix_00057725	chr21	+	2192	20	FSM	ENSG00000160191.18	ENST00000291539.11	2192	20	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_4	46.9269485919884	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	11	True	NA	21	True	AATATA	-15	NA	42653620	42775509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_42653884_42686191_42686263_42687916_42687995_42698967_42699012_42731769_42731950_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
H1_mix_00057726	chr21	+	1884	19	FSM	ENSG00000160191.18	ENST00000335512.8	1883	19	-1	0	0	0	multi-exon	FALSE	canonical	3	97	junction_4	46.3276042287991	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	139	False	NA	21	True	AATATA	-15	NA	42653748	42775509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_42653884_42686191_42686263_42687916_42687995_42698967_42699012_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
H1_mix_00057727	chr21	+	794	5	FSM	ENSG00000160191.18	ENST00000486902.5	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	81.7324140105992	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATCACTATTTCATGTAT	-1	True	NA	9	True	AATAAA	-11	NA	42653778	42701189	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_42653884_42686191_42686263_42687916_42687995_42698967_42699012_42700693
H1_mix_00057728	chr21	+	2116	18	FSM	ENSG00000160191.18	ENST00000398232.7	1885	18	-231	0	-73	0	multi-exon	FALSE	canonical	3	50	junction_1	65.6687187543458	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	NA	False	NA	21	True	AATATA	-15	NA	42653547	42775509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_42653884_42698967_42699012_42731769_42731950_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
H1_mix_00057729	chr21	+	1783	18	FSM	ENSG00000160191.18	ENST00000398234.7	1783	18	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	72.3980251694955	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	-1	True	NA	21	True	AATATA	-15	NA	42653778	42775509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_42653884_42687916_42687995_42698967_42699012_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
H1_mix_00057731	chr21	+	1671	17	FSM	ENSG00000160191.18	ENST00000398224.3	1671	17	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	66.5708914898246	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	1	True	NA	21	True	AATATA	-15	NA	42653812	42775509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_42653884_42698967_42699012_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
H1_mix_00057733	chr21	+	5989	16	ISM	ENSG00000160191.18	ENST00000328862.10	1956	19	73738	0	-4241	0	3prime_fragment	FALSE	canonical	3	147	junction_1	36.2488927033947	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	NA	False	NA	21	True	AATATA	-15	NA	42727516	42775509	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr21_+_42731950_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
H1_mix_00057734	chr21	+	316	2	NNC	ENSG00000160194.18	novel	2029	6	NA	NA	-18	-20106	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	0	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGATATGTGGTAATGTGT	490	False	NA	9	True	AATAAA	-20	NA	42879625	42883825	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_+_42879722_42883605
H1_mix_00057735	chr21	+	4694	3	FSM	ENSG00000160194.18	ENST00000340344.4	4676	3	-18	0	-18	0	multi-exon	FALSE	canonical	3	699	junction_2	80.5	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTAGGCACTATGCCTC	NA	False	NA	8	True	AATAAA	-22	NA	42893249	42913304	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_42893382_42896926_42897048_42908863
H1_mix_00057741	chr21	+	4584	5	FSM	ENSG00000160208.13	ENST00000470886.1	4634	5	50	0	50	0	multi-exon	FALSE	canonical	3	402	junction_2	32.7137203631748	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTGTTTGATGTTGAC	NA	False	NA	32	True	ATTAAA	-21	NA	43686181	43696077	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_43686936_43687515_43688241_43690287_43690441_43691438_43691503_43693189
H1_mix_00057753	chr21	+	6989	23	FSM	ENSG00000160218.13	ENST00000291574.9	6986	23	-16	13	-16	-13	multi-exon	FALSE	canonical	3	57	junction_21	18.54456325844	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAGAAGAAACTATTTT	7	False	NA	NA	False	AATACA	-3	NA	44012292	44106539	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_44012561_44032090_44032173_44037791_44037928_44052279_44052477_44055697_44055894_44059102_44059215_44063537_44063786_44074323_44074471_44075038_44075154_44076551_44076629_44077692_44077785_44079563_44079705_44080014_44080128_44082787_44083303_44084121_44084264_44086801_44086961_44087698_44087929_44089832_44089934_44091922_44092050_44094062_44094234_44098356_44098535_44102777_44102973_44103292
H1_mix_00057755	chr21	+	1098	6	FSM	ENSG00000160221.18	ENST00000427803.6	1077	6	-21	0	-13	0	multi-exon	FALSE	canonical	3	25	junction_5	252.505524692035	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCCTGGCAGGTGAACC	9478	False	NA	NA	False	ATTAAA	-19	NA	44133596	44141417	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_44133839_44134101_44134155_44136059_44136174_44137176_44137297_44140249_44140343_44140941
H1_mix_00057757	chr21	+	1655	7	FSM	ENSG00000160221.18	ENST00000291577.11	1584	7	-71	0	2	0	multi-exon	FALSE	canonical	0	0	junction_6	241.03227077625	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGCTGCATTCATCTG	-13	True	NA	NA	False	AATAAA	-17	NA	44133611	44145711	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_44133839_44134101_44134155_44136059_44136174_44137176_44137297_44140249_44140343_44143204_44143362_44144820
H1_mix_00057759	chr21	+	1512	6	FSM	ENSG00000160221.18	ENST00000348499.9	1506	6	-6	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	314.332689995807	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATCTGTGTGTTCAGGGT	-2	True	NA	NA	False	AATAAA	-29	NA	44133673	44145723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_44133839_44134101_44134155_44136059_44136174_44137176_44137297_44143204_44143362_44144820
H1_mix_00057763	chr21	+	686	6	FSM	ENSG00000160221.18	ENST00000419699.1	674	6	-12	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	310.008128925678	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATCTGTGTGTTCAGGGT	1198	False	NA	NA	False	AATAAA	-29	NA	44136106	44145723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_44136174_44137176_44137297_44140249_44140343_44143204_44143362_44144820_44144917_44145570
H1_mix_00057766	chr21	+	3408	25	FSM	ENSG00000141959.17	ENST00000397961.6	3390	25	-18	0	-18	0	multi-exon	FALSE	canonical	1	1	junction_2	410.321975116967	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCTGCAGAACTCCTCAG	7009	False	NA	39	True	AATAAA	-40	NA	44300032	44327376	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_44300191_44304274_44304456_44305256_44305418_44305799_44305936_44306680_44306755_44311005_44311084_44312104_44312295_44312977_44313144_44313637_44313683_44313912_44314022_44316243_44316340_44316431_44316525_44318469_44318596_44319350_44319416_44320083_44320148_44321728_44321876_44322132_44322204_44322961_44323050_44323765_44323919_44324490_44324656_44324855_44324918_44325152_44325265_44325960_44326061_44326158_44326265_44326714
H1_mix_00057768	chr21	+	3122	9	FSM	ENSG00000141959.17	ENST00000498841.5	3122	9	0	0	0	0	multi-exon	FALSE	canonical	3	1010	junction_1	62.5078745039375	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCTGCAGAACTCCTCAG	NA	False	NA	39	True	AATAAA	-40	NA	44319622	44327376	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_44320148_44321728_44321876_44322132_44322204_44322961_44323050_44323765_44323919_44324490_44324656_44324855_44326061_44326158_44326265_44326714
H1_mix_00057769	chr21	+	1947	11	FSM	ENSG00000141959.17	ENST00000467315.5	1947	11	0	0	0	0	multi-exon	FALSE	canonical	3	1010	junction_1	58.5009401633854	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCTGCAGAACTCCTCAG	NA	False	NA	39	True	AATAAA	-40	NA	44319866	44327376	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_44320148_44321728_44321876_44322132_44322204_44322961_44323050_44323765_44323919_44324490_44324656_44324855_44324918_44325152_44325265_44325960_44326061_44326158_44326265_44326714
H1_mix_00057773	chr21	+	1545	2	NNC	ENSG00000228709.2	novel	1856	2	NA	NA	-44	8	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	0	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTCAGAAAAATCAGTTAT	-11	True	NA	20	True	AATAAA	-24	NA	44485441	44491149	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_+_44486231_44490393
H1_mix_00057775	chr21	+	2108	6	FSM	ENSG00000235890.2	ENST00000451035.2	2108	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	8.58836422143356	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGGGCGATTCTCTGAGT	NA	False	NA	23	True	AATAAA	-32	NA	44506806	44516575	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_44507100_44508036_44508310_44508726_44508930_44509251_44509407_44509822_44509928_44515496
H1_mix_00057778	chr21	+	896	6	FSM	ENSG00000160256.13	ENST00000291634.11	892	6	-4	0	0	0	multi-exon	FALSE	canonical	3	130	junction_2	61.1031914060141	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTGCTTCCCTGATTCA	5	True	NA	-11	True	AATAAA	-42	NA	44940024	44976973	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_44940187_44943683_44943838_44960099_44960169_44967033_44967182_44973196_44973266_44976679
H1_mix_00057779	chr21	+	884	6	NNC	ENSG00000160256.13	novel	892	6	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_4	99.7147932856505	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTGCTTCCCTGATTCA	14	True	NA	-11	True	AATAAA	-42	NA	44940033	44976973	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_+_44940187_44943683_44943838_44960099_44960169_44967033_44967182_44973199_44973266_44976679
H1_mix_00057780	chr21	+	747	5	NIC	ENSG00000160256.13	novel	880	6	NA	NA	13	-18	combination_of_known_splicesites	FALSE	canonical	3	32	junction_4	107.474415560169	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCAGGGCCGTTCCCATG	22	True	NA	-29	True	AATAAA	-24	NA	44940041	44976955	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_+_44940187_44943683_44943793_44960099_44960169_44967033_44967182_44976679
H1_mix_00057781	chr21	+	2279	1	FSM	ENSG00000276529.1	ENST00000616815.1	443	1	-1842	6	-1842	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAATGACTCTTGTCTGG	8606	False	NA	27	True	AATAAA	-30	NA	44976989	44979268	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_44977000_44979300
H1_mix_00057783	chr21	+	6922	11	FSM	ENSG00000197381.17	ENST00000348831.9	6902	11	-20	0	-9	0	multi-exon	FALSE	canonical	1	22	junction_9	13.5517526541772	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGTTGCTGAGACTT	-30	True	NA	5	True	AATAAA	-18	NA	45074559	45226560	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_45074794_45128401_45128574_45171609_45171685_45175729_45176665_45180329_45180445_45182584_45182754_45183361_45183511_45184922_45185092_45204554_45204737_45220835_45221015_45222017
H1_mix_00057784	chr21	+	3569	13	FSM	ENSG00000197381.17	ENST00000389863.8	3563	13	-6	0	-6	0	multi-exon	FALSE	canonical	0	0	junction_8	19.7038842758365	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGTTGCTGAGACTT	4	True	NA	5	True	AATAAA	-18	NA	45074593	45226560	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_45074794_45128401_45128574_45171609_45171685_45175729_45176665_45180329_45180445_45182584_45182754_45183361_45183511_45184473_45184594_45184922_45185092_45204554_45204737_45220835_45221015_45222017_45222108_45225546
H1_mix_00057785	chr21	+	5039	13	FSM	ENSG00000197381.17	ENST00000496664.5	5033	13	-6	0	-6	0	multi-exon	FALSE	canonical	0	0	junction_8	17.9714279405456	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGTTGCTGAGACTT	4	True	NA	5	True	AATAAA	-18	NA	45074593	45226560	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_45074794_45128401_45128574_45171609_45171685_45175729_45176665_45180329_45180445_45182584_45182754_45183361_45183511_45184473_45184594_45184922_45185092_45204554_45204737_45220835_45221015_45222017_45223578_45225546
H1_mix_00057788	chr21	+	4413	4	FSM	ENSG00000223768.3	ENST00000647108.1	4397	4	-16	0	-4	0	multi-exon	FALSE	canonical	1	1	junction_3	9.8770215933527	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGTAGATGTGTGTGT	-16	True	NA	13	True	TATAAA	-17	NA	45288045	45297354	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_45288166_45289350_45289439_45290470_45293523_45296201
H1_mix_00057789	chr21	+	5408	42	FSM	ENSG00000182871.16	ENST00000651438.1	5408	42	0	0	0	0	multi-exon	FALSE	canonical	3	1914	junction_8	230.566454512491	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGGTTTGCAAGCAGCC	18	True	NA	18	True	AATAAA	-19	NA	45405164	45513720	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_45405242_45405378_45405474_45468241_45468787_45473894_45473982_45475475_45475536_45476350_45476481_45477410_45477488_45477749_45477966_45478326_45478354_45479901_45479965_45480069_45480157_45480466_45480521_45480699_45480859_45481962_45482026_45482794_45482822_45486860_45486993_45487446_45487510_45488417_45488445_45489485_45489522_45490274_45490347_45490835_45490872_45491224_45491315_45492534_45492565_45492686_45492714_45493162_45493226_45493500_45493576_45494544_45494572_45494861_45494916_45495357_45495433_45496499_45496569_45497049_45497093_45497598_45497662_45504010_45504055_45504415_45504557_45505133_45505279_45505357_45505432_45505837_45505967_45507560_45507594_45509355_45509602_45510063_45510262_45511110_45511227_45512187
H1_mix_00057790	chr21	+	5578	41	FSM	ENSG00000182871.16	ENST00000355480.10	5891	41	313	0	304	0	multi-exon	FALSE	canonical	1	10	junction_1	423.11949848713	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGGTTTGCAAGCAGCC	312	False	NA	18	True	AATAAA	-19	NA	45455834	45513720	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_45456177_45468241_45468787_45473894_45473982_45475475_45475536_45476350_45476481_45477410_45477488_45477749_45477966_45478326_45478354_45479901_45479965_45480069_45480157_45480466_45480521_45480699_45480859_45481962_45482026_45482794_45482822_45486860_45486993_45487446_45487510_45488417_45488445_45489485_45489522_45490274_45490347_45490835_45490872_45491224_45491315_45492534_45492565_45492686_45492714_45493162_45493226_45493500_45493576_45494544_45494572_45494861_45494916_45495357_45495433_45496499_45496569_45497049_45497093_45497598_45497662_45504010_45504055_45504415_45504557_45505133_45505279_45505357_45505432_45505837_45505967_45507560_45507594_45509355_45509602_45510063_45510262_45511110_45511227_45512187
H1_mix_00057791	chr21	+	5850	41	FSM	ENSG00000182871.16	ENST00000359759.8	6586	41	736	0	736	0	multi-exon	FALSE	canonical	1	9	junction_1	423.250480655368	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTGGTTTGCAAGCAGC	262	False	NA	17	True	AATAAA	-18	NA	45456266	45513719	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_45456882_45468241_45468787_45473894_45473982_45475475_45475536_45476350_45476481_45477410_45477488_45477749_45477966_45478326_45478354_45479901_45479965_45480069_45480157_45480466_45480521_45480699_45480859_45481962_45482026_45482794_45482822_45486860_45486993_45487446_45487510_45488417_45488445_45489485_45489522_45490274_45490347_45490835_45490872_45491224_45491315_45492534_45492565_45492686_45492714_45493162_45493226_45493500_45493576_45494544_45494572_45494861_45494916_45495357_45495433_45496499_45496569_45497049_45497093_45497598_45497662_45504010_45504055_45504415_45504557_45505133_45505279_45505357_45505432_45505837_45505967_45507560_45507594_45509355_45509602_45510063_45510262_45511110_45511227_45512187
H1_mix_00057792	chr21	+	3386	23	FSM	ENSG00000182871.16	ENST00000342220.9	3386	23	0	0	0	0	multi-exon	FALSE	canonical	3	452	junction_17	449.723716839131	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGGTTTGCAAGCAGCC	1927	False	NA	18	True	AATAAA	-19	NA	45490274	45513720	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_45490347_45490835_45490872_45491224_45491315_45492534_45492565_45492686_45492714_45493162_45493226_45493500_45493576_45494544_45494572_45494861_45494916_45495357_45495433_45496499_45496569_45497049_45497093_45497598_45497662_45504010_45504055_45504415_45504557_45505133_45505279_45505357_45505432_45505834_45505967_45507560_45507594_45509355_45509602_45510063_45510262_45511110_45511227_45512187
H1_mix_00057794	chr21	+	1713	12	FSM	ENSG00000183570.17	ENST00000400305.5	1717	12	0	4	0	0	multi-exon	FALSE	canonical	3	14	junction_6	4.96267056871134	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCACCGGCTCTGGCTTGTC	98	False	NA	14	True	AATAAA	-15	NA	45896269	45942450	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_45896363_45899598_45899623_45900590_45900624_45900996_45901114_45909354_45909487_45910901_45911031_45917587_45917630_45929916_45929996_45930785_45930846_45935252_45935306_45940029_45940200_45941669
H1_mix_00057797	chr21	+	4280	36	NNC	ENSG00000142156.16	novel	4203	35	NA	NA	-52	16286	intron_retention	FALSE	non_canonical	0	0	junction_29	201.819430305854	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGATGAAG	4375	False	NA	NA	False	NA	NA	NA	45981717	46021336	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_+_45981948_45982633_45982764_45984268_45984470_45986525_45986686_45986943_45987073_45987154_45987176_45987498_45987520_45987609_45987655_45989083_45989138_45989607_45989653_45989751_45989779_45990257_45990285_45990377_45990423_45990772_45990827_45990978_45991042_45992009_45992073_45992163_45992218_45992362_45992399_45992747_45992811_45994166_45994230_45997420_45997484_45997699_45997763_45998120_45998172_45998397_45998434_45998896_45998960_45999152_45999219_45999656_45999693_46000330_46000368_46000758_46000768_46001252_46001387_46001960_46002071_46002217_46002402_46002526_46002711_46003119_46003150_46003390_46005046_46021308
H1_mix_00057800	chr21	+	2622	7	FSM	ENSG00000142156.16	ENST00000463060.6	1471	7	0	-1151	0	99	multi-exon	FALSE	canonical	3	162	junction_1	276.499397226588	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCATCACCACCAGTCCCA	2027	False	NA	123	True	NA	NA	NA	46000930	46005149	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46001152_46001252_46001387_46001960_46002071_46002217_46002402_46002526_46002711_46003119_46003150_46003390
H1_mix_00057801	chr21	+	2358	6	FSM	ENSG00000142156.16	ENST00000498614.5	2358	6	0	0	0	0	multi-exon	FALSE	canonical	3	851	junction_2	33.4041913537807	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGTTATCTTCCCCAC	2293	False	NA	24	True	AATAAA	-17	NA	46001196	46005050	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46001387_46001960_46002071_46002217_46002402_46002526_46002711_46003119_46003150_46003390
H1_mix_00057803	chr21	+	3446	28	FSM	ENSG00000142173.16	ENST00000300527.9	3445	28	-3	2	-3	-2	multi-exon	FALSE	canonical	3	402	junction_1	64.6630604399416	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCGTGCCTGCTTGCGA	-21	True	NA	24	True	AATAAA	-12	NA	46098108	46132846	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46098174_46111449_46111592_46111978_46112578_46112803_46112825_46114007_46114074_46115871_46115926_46116008_46116054_46116376_46116404_46116650_46116678_46116769_46116815_46117399_46117454_46117873_46117937_46118613_46118677_46119029_46119120_46119787_46119851_46120514_46120578_46121060_46121124_46121555_46121619_46122107_46122159_46122495_46122532_46122874_46122938_46124650_46124714_46124884_46124921_46125265_46125312_46125464_46125618_46125784_46126238_46126502_46126542_46131953
H1_mix_00057804	chr21	+	6141	27	FSM	ENSG00000142173.16	ENST00000397763.5	3101	27	0	-3040	0	0	multi-exon	FALSE	canonical	3	73	junction_26	108.914303210308	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCGTGCCTGCTTGCGAGC	-5	True	NA	26	True	AATAAA	-14	NA	46111449	46132848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46111592_46111978_46112578_46112803_46112825_46114007_46114074_46115871_46115926_46116008_46116054_46116376_46116404_46116650_46116678_46116769_46116815_46117399_46117454_46117873_46117937_46118613_46118677_46119029_46119120_46119787_46119851_46120514_46120578_46121060_46121124_46121555_46121619_46122107_46122159_46122495_46122532_46122874_46122938_46124650_46124714_46124884_46124921_46125265_46125312_46125464_46125618_46125784_46126238_46126502_46126542_46129195
H1_mix_00057807	chr21	+	3228	4	FSM	ENSG00000215424.10	ENST00000664725.1	3213	4	-15	0	-3	0	multi-exon	FALSE	canonical	1	6	junction_3	9.2736184954957	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGAAACCTTACCTTAGT	-7	True	NA	NA	False	ATTAAA	-3	NA	46229213	46246292	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46229267_46236223_46236327_46240833_46241020_46243406
H1_mix_00057808	chr21	+	2628	4	FSM	ENSG00000215424.10	ENST00000669476.1	2621	4	-7	0	-3	0	multi-exon	FALSE	canonical	2	4	junction_3	9.8770215933527	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACTCGTTCTTTTTTTTTT	-7	True	NA	NA	False	TTTAAA	-16	NA	46229213	46251871	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46229267_46236223_46236327_46240833_46241020_46249585
H1_mix_00057810	chr21	+	775	5	FSM	ENSG00000182362.14	ENST00000397701.9	739	5	-64	28	-64	0	multi-exon	FALSE	canonical	3	189	junction_3	15.039531242695	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGGGGAACCTCCTCTTAT	102	False	NA	9	True	AATAAA	-16	NA	46286277	46297723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46286416_46286869_46287124_46291333_46291463_46296161_46296231_46297538
H1_mix_00057811	chr21	+	3765	3	FSM	ENSG00000182362.14	ENST00000468924.5	912	3	11	-2864	11	2597	multi-exon	FALSE	canonical	3	198	junction_1	15.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATGTATGAGTGAATCAT	-4	True	NA	21	True	AAAAAG	-18	NA	46286365	46294794	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46286416_46286869_46287124_46291333
H1_mix_00057812	chr21	+	558	4	NIC	ENSG00000182362.14	novel	739	5	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_2	82.9015480354056	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGGGGAACCTCCTCTTAT	-4	True	NA	9	True	AATAAA	-16	NA	46286365	46297723	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_+_46286416_46286869_46287124_46296161_46296231_46297538
H1_mix_00057813	chr21	+	968	5	FSM	ENSG00000182362.14	ENST00000397691.1	764	5	-191	-13	0	13	multi-exon	FALSE	canonical	3	20	junction_1	83.3407913329361	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTCGTTATTGTAAATA	18	False	NA	50	True	NA	NA	NA	46286453	46297764	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46286744_46286869_46287124_46291333_46291463_46296161_46296231_46297538
H1_mix_00057814	chr21	+	1019	5	FSM	ENSG00000182362.14	ENST00000329319.7	1019	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	64.2242166164758	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCATCGGGTATTTTTC	14	True	NA	37	True	AATAAA	-44	NA	46286383	46297751	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46286738_46286869_46287124_46291333_46291463_46296161_46296231_46297538
H1_mix_00057815	chr21	+	1400	4	FSM	ENSG00000182362.14	ENST00000339195.10	890	4	-538	28	-496	0	multi-exon	FALSE	canonical	3	29	junction_2	78.6949101841338	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGGGGAACCTCCTCTTAT	1	True	NA	9	True	AATAAA	-16	NA	46285845	46297723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46286738_46286869_46287124_46296161_46296231_46297538
H1_mix_00057817	chr21	+	10485	47	FSM	ENSG00000160299.17	ENST00000480896.5	10485	47	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_38	40.4677051570821	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTGTGTTGTTTTTTTT	208	False	NA	44	True	AATAAA	-28	NA	46324887	46445769	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46325211_46326376_46326590_46334396_46334769_46346127_46346209_46346742_46346999_46347456_46347513_46349011_46349187_46349683_46349821_46351428_46351541_46353103_46353327_46353986_46354069_46355451_46355627_46356973_46357192_46363479_46363935_46366583_46367140_46381693_46381841_46385831_46385984_46388741_46388885_46389198_46389432_46390669_46390833_46391163_46391377_46397264_46397495_46398013_46398131_46398234_46398256_46399589_46399797_46401550_46401722_46402330_46402484_46411188_46412068_46412836_46412993_46416068_46416840_46418203_46418307_46421969_46422125_46425830_46425972_46427621_46427796_46428394_46428591_46430009_46430233_46430506_46430658_46431528_46431979_46435903_46436149_46436978_46437082_46438163_46438338_46440082_46440203_46440854_46441085_46442496_46442574_46443809_46443949_46444693_46444822_46445283
H1_mix_00057822	chr21	+	2711	20	FSM	ENSG00000160305.18	ENST00000466639.5	2711	20	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_5	18.4814048943744	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATACCAGAGTTAATATCCT	20	True	NA	7	True	AGTAAA	-21	NA	46458976	46547205	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46459223_46484756_46484829_46490599_46490720_46496987_46497108_46498581_46498834_46509256_46509377_46511416_46511615_46529091_46529184_46532126_46532238_46533523_46533648_46534003_46534114_46534584_46534688_46537223_46537289_46537445_46537540_46538482_46538603_46539876_46539992_46541755_46541896_46545136_46545274_46545880_46545962_46546914
H1_mix_00057823	chr21	+	2760	21	FSM	ENSG00000160305.18	ENST00000435722.7	2760	21	0	0	0	0	multi-exon	FALSE	canonical	1	31	junction_8	12.1144541767262	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATACCAGAGTTAATATCCT	100	True	NA	7	True	AGTAAA	-21	NA	46459056	46547205	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46459223_46484756_46484829_46490599_46490720_46496987_46497108_46498581_46498834_46504360_46504490_46509256_46509377_46511416_46511615_46529091_46529184_46532126_46532238_46533523_46533648_46534003_46534114_46534584_46534688_46537223_46537289_46537445_46537540_46538482_46538603_46539876_46539992_46541755_46541896_46545136_46545274_46545880_46545962_46546914
H1_mix_00057825	chr21	+	9532	17	ISM	ENSG00000160305.18	ENST00000417564.3	7350	38	88783	-2848	-5237	2848	3prime_fragment	FALSE	canonical	3	57	junction_4	14.2739655929948	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTGTTTAGATATACAAAT	NA	False	NA	NA	False	NA	NA	NA	46547673	46572863	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr21_+_46549886_46550542_46550745_46551633_46551744_46551823_46551905_46554168_46554293_46554574_46554697_46554821_46554934_46555981_46556092_46556938_46557070_46557584_46557754_46558222_46558394_46560721_46560784_46561747_46561806_46563857_46563933_46565712_46565888_46566559_46566684_46567369
H1_mix_00057827	chr21	+	2358	8	ISM	ENSG00000160310.19	ENST00000355680.8	2354	12	-58	4989	1	705	5prime_fragment	FALSE	canonical	3	273	junction_1	169.20148597794	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGCTATTTCAGAAGTT	8835	False	NA	32	True	AATAAA	-41	NA	46635615	46660135	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr21_+_46635764_46636438_46636548_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744
H1_mix_00057828	chr21	+	2151	11	FSM	ENSG00000160310.19	ENST00000397638.6	2131	11	-20	0	0	0	multi-exon	FALSE	canonical	3	248	junction_10	170.309277492449	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTATCCTGTTTTATGC	8814	False	NA	24	True	AATAAA	-24	NA	46635594	46664951	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744_46658921_46660832_46660963_46661799_46661937_46663382_46663555_46664294
H1_mix_00057829	chr21	+	1857	8	FSM	ENSG00000160310.19	ENST00000451211.6	1878	8	21	0	1	0	multi-exon	FALSE	canonical	1	4	junction_7	222.035022058251	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATAGGCTGGGTGCAGT	8835	False	NA	NA	False	ATTAAA	-9	NA	46635615	46665117	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744_46658921_46664294
H1_mix_00057830	chr21	+	2888	11	FSM	ENSG00000160310.19	ENST00000397637.5	2880	11	-8	0	0	0	multi-exon	FALSE	canonical	3	248	junction_10	177.994971839094	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTATCCTGTTTTATGC	-25	True	NA	24	True	AATAAA	-24	NA	46635641	46664951	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46636548_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744_46658921_46660832_46660963_46661799_46661937_46663382_46663555_46664294
H1_mix_00057831	chr21	+	1086	7	ISM	ENSG00000160310.19	ENST00000355680.8	2354	12	-28	15236	-4	0	5prime_fragment	FALSE	canonical	3	273	junction_1	176.444514413644	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGCTCAGTGTCTTGAA	-21	True	NA	32	True	NA	NA	NA	46635645	46649888	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr21_+_46635764_46636438_46636548_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574
H1_mix_00057832	chr21	+	954	6	FSM	ENSG00000160310.19	ENST00000397628.5	954	6	0	0	0	0	multi-exon	FALSE	canonical	3	474	junction_1	74.4215022691695	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGTGTCTTGAATTTTC	7	True	NA	37	True	NA	NA	NA	46635673	46649893	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574
H1_mix_00057833	chr21	+	2354	12	FSM	ENSG00000160310.19	ENST00000355680.8	2354	12	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_11	175.811788922037	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGGTGCAGTGGCTTAC	7	True	NA	NA	False	ATTAAA	-16	NA	46635673	46665124	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46635764_46636438_46636548_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744_46658921_46660832_46660963_46661799_46661937_46663382_46663555_46664294
H1_mix_00057834	chr21	+	1042	7	NNC	ENSG00000160310.19	novel	2354	12	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_1	227.118666975854	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGCTCAGTGTCTTGAA	18	True	NA	32	True	NA	NA	NA	46635684	46649888	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_+_46635764_46636443_46636548_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574
H1_mix_00057835	chr21	+	2197	7	ISM	ENSG00000160310.19	ENST00000397638.6	2131	11	62	4807	3	714	5prime_fragment	FALSE	canonical	3	395	junction_6	105.107352528525	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGAAGTTACTGCTTTG	10	True	NA	41	True	ATTAAA	-21	NA	46635676	46660144	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744
H1_mix_00057836	chr21	+	1478	6	FSM	ENSG00000160310.19	ENST00000482508.5	1478	6	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_5	153.714800848845	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGTATTTGCATTACAG	7560	False	NA	3	True	AATAAA	-16	NA	46643285	46661270	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744_46658921_46660832
H1_mix_00057838	chr21	+	4031	4	FSM	ENSG00000160310.19	ENST00000486520.1	4031	4	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_3	17.9133717900592	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTATCCTGTTTTATGC	NA	False	NA	24	True	AATAAA	-24	NA	46656822	46664951	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46658921_46660832_46661937_46663382_46663555_46664294
H1_mix_00057839	chr21	-	1596	7	FSM	ENSG00000280071.4	ENST00000620528.5	1584	7	0	-12	0	12	multi-exon	FALSE	canonical	1	226	junction_1	202.962845532542	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATCTGTGTGTTCAGGGT	-7	True	NA	NA	False	AATAAA	-29	NA	5128369	5116328	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_5117232_5118690_5118848_5121710_5121804_5124755_5124876_5125878_5125993_5127897_5127951_5128213
H1_mix_00057840	chr21	-	1597	7	FSM	ENSG00000276612.3	ENST00000623476.2	1599	7	0	2	0	-2	multi-exon	FALSE	canonical	0	0	junction_5	251.711254328358	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACTTTGTGCTGCATTCA	NA	False	NA	NA	False	AATAAA	-13	NA	5133805	5116344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_5117232_5118690_5118848_5121710_5121804_5124755_5124876_5125878_5125993_5133425_5133501_5133654
H1_mix_00057841	chr21	-	898	6	FSM	ENSG00000280071.4	ENST00000624120.3	898	6	0	0	0	0	multi-exon	FALSE	canonical	1	46	junction_2	327.24828494585	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGATGTTTCTTCCTGGG	NA	False	NA	NA	False	NA	NA	NA	5128372	5116936	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_5117232_5118690_5118848_5124755_5124876_5125878_5125993_5127897_5127951_5128213
H1_mix_00057842	chr21	-	696	6	FSM	ENSG00000280071.4	ENST00000624648.3	696	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	302.222699346029	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCTGGCAGGTGAACCAC	89	False	NA	NA	False	ATTAAA	-21	NA	5128273	5120633	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_5120890_5121710_5121804_5124755_5124876_5125878_5125993_5127897_5127951_5128213
H1_mix_00057843	chr21	-	3626	22	NNC	ENSG00000275464.5	novel	3188	21	NA	NA	0	2291	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	89.1080518132855	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCACCGGAAGGAAGACAGG	4	True	NA	NA	False	NA	NA	NA	5154658	5128579	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_5129019_5130871_5131456_5133425_5133501_5133654_5133806_5133901_5134121_5135088_5135155_5135934_5136044_5137326_5137475_5139697_5139879_5140952_5141104_5141276_5141425_5141558_5141708_5142531_5142669_5143221_5143293_5144090_5144235_5146136_5146367_5146657_5146794_5147288_5147433_5147778_5147879_5148209_5148305_5152960_5153074_5154622
H1_mix_00057844	chr21	-	5040	21	FSM	ENSG00000275464.5	ENST00000617716.4	3188	21	0	-1852	0	1852	multi-exon	FALSE	canonical	3	144	junction_20	53.2971622133862	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	4	True	NA	NA	False	NA	NA	NA	5154658	5129018	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_5131456_5133425_5133501_5133654_5133806_5133901_5134121_5135088_5135155_5135934_5136044_5137326_5137475_5139697_5139879_5140952_5141104_5141276_5141425_5141558_5141708_5142531_5142669_5143221_5143293_5144090_5144235_5146136_5146367_5146657_5146794_5147288_5147433_5147778_5147879_5148209_5148305_5152960_5153074_5154622
H1_mix_00057845	chr21	-	3634	3	FSM	ENSG00000280433.1	ENST00000623998.1	3634	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	11	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTTGCACTGGATCTTT	NA	False	NA	NA	False	AATACA	-16	NA	5163695	5155498	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_5158760_5159079_5159275_5163517
H1_mix_00057846	chr21	-	284	1	FSM	ENSG00000274559.3	ENST00000464664.3	460	1	150	26	150	-26	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAAATTGATGCCTGCAG	NA	False	NA	NA	False	AGTAAA	-3	NA	5973233	5972949	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_5972900_5973200
H1_mix_00057847	chr21	-	859	3	FSM	ENSG00000275496.4	ENST00000617746.4	859	3	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	71	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGTCAGTAGTTTTGGGA	6	False	NA	NA	False	NA	NA	NA	6267275	6230398	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_6230952_6234982_6235148_6267134
H1_mix_00057848	chr21	-	459	2	FSM	ENSG00000275496.4	ENST00000624446.1	465	2	6	0	-3	0	multi-exon	FALSE	canonical	3	20	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTCATCTCAAGACAATT	NA	False	NA	NA	False	NA	NA	NA	6267307	6230665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_6230952_6267134
H1_mix_00057849	chr21	-	2275	18	NIC	ENSG00000274276.5	novel	2353	18	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	803	junction_1	476.252709807111	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	3	True	NA	NA	False	TATAAA	-14	NA	6467507	6444868	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_6445326_6445539_6445662_6448480_6448566_6449822_6449932_6450511_6450647_6450903_6450982_6452118_6452225_6453988_6454074_6454630_6454757_6455577_6455670_6456880_6456951_6457064_6457200_6457293_6457374_6457920_6458056_6460186_6460294_6463662_6463880_6464943_6465020_6467447
H1_mix_00057850	chr21	-	2761	17	FSM	ENSG00000274276.5	ENST00000624406.3	2453	17	0	-308	0	308	multi-exon	FALSE	canonical	3	171	junction_16	618.140811223462	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGATGGAGTCTTGCTCT	1	True	NA	NA	False	NA	NA	NA	6467509	6444560	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_6445662_6448480_6448566_6449822_6449932_6450511_6450647_6450903_6450982_6452118_6452225_6453988_6454074_6454630_6454757_6455577_6455670_6456880_6456951_6457064_6457200_6457293_6457374_6457920_6458056_6460186_6460294_6463662_6463880_6464943_6464982_6467447
H1_mix_00057851	chr21	-	2822	17	FSM	ENSG00000274276.5	ENST00000398168.6	2495	17	-19	-308	0	308	multi-exon	FALSE	canonical	3	1666	junction_10	306.224794881146	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGATGGAGTCTTGCTCT	NA	False	NA	NA	False	NA	NA	NA	6467532	6444560	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_6445662_6448480_6448566_6449822_6449932_6450511_6450647_6450903_6450982_6452118_6452225_6453988_6454074_6454630_6454757_6455577_6455670_6456880_6456951_6457064_6457200_6457293_6457374_6457920_6458056_6460186_6460294_6463662_6463880_6464943_6465020_6467447
H1_mix_00057852	chr21	-	2661	18	FSM	ENSG00000274276.5	ENST00000618024.4	2353	18	0	-308	0	308	multi-exon	FALSE	canonical	3	44	junction_17	712.200668623347	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGATGGAGTCTTGCTCT	NA	False	NA	NA	False	NA	NA	NA	6468040	6444560	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_6445326_6445539_6445662_6448480_6448566_6449822_6449932_6450511_6450647_6450903_6450982_6452118_6452225_6453988_6454074_6454630_6454757_6455577_6455670_6456880_6456951_6457064_6457200_6457293_6457374_6457920_6458056_6460186_6460294_6463662_6463880_6464943_6465020_6467902
H1_mix_00057853	chr21	-	676	5	FSM	ENSG00000274276.5	ENST00000624808.1	676	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	1295.06939968482	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTTCCCTATCTTTTC	NA	False	NA	NA	False	NA	NA	NA	6450632	6447260	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_6447580_6447735_6447778_6448480_6448566_6449822_6449932_6450511
H1_mix_00057854	chr21	-	2171	2	FSM	ENSG00000275895.7	ENST00000636923.1	3339	2	1190	-22	743	15	multi-exon	FALSE	canonical	3	6361	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTGTGGAAGTTCTTT	NA	False	NA	NA	False	AATAAA	-35	NA	6486869	6484607	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_6486231_6486321
H1_mix_00057855	chr21	-	960	8	FSM	ENSG00000275895.7	ENST00000610664.5	945	8	0	-15	0	15	multi-exon	FALSE	canonical	3	4049	junction_6	885.778177419063	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTGTGGAAGTTCTTT	-4	True	NA	NA	False	AATAAA	-35	NA	6499248	6484607	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_6484917_6486137_6486231_6486321_6486456_6487106_6487206_6487362_6487413_6492130_6492198_6495992_6496081_6499128
H1_mix_00057856	chr21	-	1035	9	FSM	ENSG00000275895.7	ENST00000639996.1	1019	9	0	-16	0	15	multi-exon	FALSE	canonical	3	353	junction_6	2055.52005280902	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTGTGGAAGTTCTTT	-12	False	NA	NA	False	AATAAA	-35	NA	6499256	6484607	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_6484917_6486137_6486231_6486321_6486456_6487106_6487206_6487362_6487413_6492130_6492198_6493043_6493111_6495992_6496081_6499128
H1_mix_00057857	chr21	-	813	8	FSM	ENSG00000275895.7	ENST00000619610.2	813	8	0	0	0	0	multi-exon	FALSE	canonical	3	2268	junction_5	1688.83558484924	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAAGGGGAATTTTTTTT	42	False	NA	NA	False	NA	NA	NA	6499202	6484708	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_6484917_6486137_6486231_6486321_6486456_6487106_6487206_6487362_6487413_6493043_6493111_6495992_6496081_6499128
H1_mix_00057860	chr21	-	6408	4	NNC	ENSG00000278878.1	novel	674	2	NA	NA	0	8129	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	16.5730705262081	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTTGTTGCCTCATGCA	48	False	NA	NA	False	AATAAA	-15	NA	6670650	6659174	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_6665253_6666428_6666527_6668151_6668255_6670521
H1_mix_00057861	chr21	-	3145	2	ISM	ENSG00000280018.4	ENST00000623165.3	710	5	4063	2866	4063	-2866	internal_fragment	FALSE	canonical	3	25	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGTTTACCAAAGACATTG	4132	False	NA	NA	False	NA	NA	NA	6993636	6989315	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr21_-_6992323_6993498
H1_mix_00057863	chr21	-	2339	2	FSM	ENSG00000277991.4	ENST00000623190.1	1469	2	0	-870	0	100	multi-exon	FALSE	canonical	3	170	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGTAGACATAAGCAAATA	NA	False	NA	NA	False	AATATA	-3	NA	7675666	7669296	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_7671383_7675413
H1_mix_00057864	chr21	-	2703	1	FSM	ENSG00000280800.1	ENST00000631211.1	923	1	-968	-812	-968	812	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGACGGGCCCGGCGCCCC	NA	False	NA	NA	False	NA	NA	NA	8212274	8209571	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_8209600_8212300
H1_mix_00057865	chr21	-	1217	1	FSM	ENSG00000281383.1	ENST00000629969.1	923	1	-95	-199	-95	199	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGGCCTGAAAGAGTCCT	NA	False	NA	NA	False	TTTAAA	-17	NA	8255609	8254392	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_8254400_8255600
H1_mix_00057866	chr21	-	3028	1	FSM	ENSG00000280614.1	ENST00000625598.1	923	1	-999	-1106	-999	1106	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCGCCCGCGGGCGCGCG	NA	False	NA	NA	False	NA	NA	NA	8395340	8392312	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_8392300_8395300
H1_mix_00057867	chr21	-	923	1	FSM	ENSG00000281181.1	ENST00000627981.1	923	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGAGAGGCAAGGGGCGGG	4784	False	NA	NA	False	NA	NA	NA	8438551	8437628	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_8437600_8438600
H1_mix_00057868	chr21	-	650	2	Antisense	novelGene_ENSG00000280441.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAGGGAGAGAGCGAGA	NA	False	NA	NA	False	AAGAAA	-3	NA	8448647	8447265	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr21_-_8447727_8448458
H1_mix_00057869	chr21	-	286	1	FSM	ENSG00000203616.2	ENST00000366423.2	333	1	2	45	2	-45	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTCCTCTCATAAATGA	NA	False	NA	NA	False	NA	NA	NA	13937323	13937037	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_13937000_13937300
H1_mix_00057870	chr21	-	5677	1	Genic_Genomic	ENSG00000188992.12	novel	NA	NA	NA	NA	94123	1663	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTAAAATATGAATTTTT	NA	False	NA	NA	False	NA	NA	NA	14112826	14107149	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr21_-_14107100_14112800
H1_mix_00057871	chr21	-	3946	5	FSM	ENSG00000155304.6	ENST00000285667.4	3945	5	0	-1	0	1	multi-exon	TRUE	canonical	3	216	junction_1	14.2214626533279	181	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTACTTTTTCATTCAGG	-5	True	NA	-2	True	AATAAA	-28	NA	14383146	14371113	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_14374285_14375651_14375820_14378198_14378413_14381202_14381544_14383094
H1_mix_00057872	chr21	-	524	2	FSM	ENSG00000281903.2	ENST00000630354.1	524	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCTTAAGCCAAAAGAACCT	711	False	NA	NA	False	AAAAAG	-40	NA	14823309	14819698	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_14820031_14823117
H1_mix_00057873	chr21	-	7751	4	FSM	ENSG00000180530.11	ENST00000318948.7	7751	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	4.10960933531265	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTTTGAAATGACTGTT	-5	True	NA	-9	True	AATAAA	-20	NA	15065000	14961234	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_14968527_15014343_15014467_15043494_15043575_15064744
H1_mix_00057874	chr21	-	7527	2	NIC	ENSG00000180530.11	novel	7671	3	NA	NA	10	-11	intron_retention	FALSE	canonical	1	2	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCATTGTCTCTGGTTTG	5	True	NA	-20	True	AATAAA	-9	NA	15064990	14961245	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_14968527_15064744
H1_mix_00057875	chr21	-	1410	5	FSM	ENSG00000154640.15	ENST00000348354.7	1410	5	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_4	33.3841279652472	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACGCGTGTTTCTGTTGTG	16	False	17612917	-1	True	AATAAA	-19	NA	17612901	17593652	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_17594333_17598616_17598825_17604859_17604998_17608971_17609153_17612698
H1_mix_00057876	chr21	-	5403	5	FSM	ENSG00000154642.11	ENST00000284881.9	5396	5	0	-7	0	7	multi-exon	FALSE	canonical	3	132	junction_1	11.0989864402116	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAGTGGATGCTTTGAA	-2	True	NA	-18	True	AATAAA	-23	NA	17819356	17788966	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_17793582_17795207_17795271_17796581_17797119_17818191_17818326_17819302
H1_mix_00057877	chr21	-	6002	5	NNC	ENSG00000154642.11	novel	5396	5	NA	NA	2	7	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	60.2759280310142	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAGTGGATGCTTTGAA	266	False	NA	-18	True	AATAAA	-23	NA	17819384	17788966	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_17793582_17795207_17795271_17796581_17797119_17818191_17818326_17818731
H1_mix_00057878	chr21	-	284	1	FSM	ENSG00000215353.2	ENST00000400117.2	770	1	739	-253	739	253	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAATATGTCTGAAATT	NA	False	NA	NA	False	AATAAA	-31	NA	19759389	19759105	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_19759100_19759400
H1_mix_00057879	chr21	-	1794	5	FSM	ENSG00000228592.2	ENST00000262354.5	1784	5	0	-10	0	10	multi-exon	FALSE	canonical	3	182	junction_1	43.1530705744099	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTCAAGTATGTTTTTAA	NA	False	NA	NA	False	ATTAAA	-24	NA	23384920	23361093	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_23362240_23364037_23364194_23372326_23372449_23372947_23373085_23384687
H1_mix_00057880	chr21	-	2848	4	FSM	ENSG00000228592.2	ENST00000654898.1	2848	4	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	29.4882274061286	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAATAATGACAATAAAA	NA	False	NA	NA	False	AAAAAG	-22	NA	23384846	23361763	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_23364194_23372326_23372449_23372947_23373085_23384687
H1_mix_00057881	chr21	-	3955	10	FSM	ENSG00000260583.1_ENSG00000154719.14	ENST00000352957.9	1074	10	0	-2881	0	-5	multi-exon	FALSE	canonical	3	736	junction_1	100.700264199636	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAGGTCTTGTTATGTCA	10	True	NA	NA	False	AATAAA	-19	NA	25607481	25582774	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_25585755_25588834_25588883_25592811_25592966_25593892_25593959_25597301_25597415_25599798_25599867_25601367_25601468_25603795_25603936_25606448_25606656_25607402
H1_mix_00057882	chr21	-	927	8	ISM	ENSG00000154719.14	ENST00000352957.9	1074	10	0	7156	0	0	5prime_fragment	FALSE	canonical	3	773	junction_3	81.9838212013536	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTAAAGCTTAAAGTTC	10	True	NA	NA	False	NA	NA	NA	25607481	25592811	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr21_-_25592966_25593892_25593959_25597301_25597415_25599798_25599867_25601367_25601468_25603795_25603936_25606448_25606656_25607402
H1_mix_00057883	chr21	-	589	5	FSM	ENSG00000154723.13	ENST00000400094.5	589	5	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_4	2527.54459654029	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTGTTAGAGTTGT	-3	True	NA	0	True	AATAAA	-38	NA	25734904	25724479	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25734332_25734376_25734852
H1_mix_00057884	chr21	-	589	4	FSM	ENSG00000154723.13	ENST00000457143.6	589	4	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	2421.93490140975	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTGTTAGAGTTGT	675	False	NA	0	True	AATAAA	-38	NA	25735033	25724479	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25734938
H1_mix_00057885	chr21	-	647	4	FSM	ENSG00000154723.13	ENST00000400090.7	647	4	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_3	2411.16933365443	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTGTTAGAGTTGT	-23	True	NA	0	True	AATAAA	-38	NA	25735639	25724479	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25735486
H1_mix_00057886	chr21	-	826	4	FSM	ENSG00000154723.13	ENST00000400087.7	826	4	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_3	2407.42494979364	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTGTTAGAGTTGT	-30	True	NA	0	True	AATAAA	-38	NA	25735646	25724479	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25735314
H1_mix_00057887	chr21	-	1179	4	FSM	ENSG00000154723.13	ENST00000400093.3	1179	4	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_3	2382.15257464523	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTGTTAGAGTTGT	35	False	NA	0	True	AATAAA	-38	NA	25735673	25724479	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25734988
H1_mix_00057888	chr21	-	526	4	FSM	ENSG00000154723.13	ENST00000284971.8	526	4	0	0	0	0	multi-exon	FALSE	canonical	3	4615	junction_3	391.063791329354	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTTCTTGATGAATTGA	-3	True	NA	-20	True	AATAAA	-18	NA	25734904	25724499	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25734852
H1_mix_00057889	chr21	-	3512	19	NNC	ENSG00000142192.21	novel	3583	18	NA	NA	0	85528	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	287.348462478728	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGCTCTACCTCCTCAA	1037	False	NA	NA	False	NA	NA	NA	26170667	25795021	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_25795054_25880549_25881772_25891721_25891869_25897572_25897674_25905023_25905078_25911740_25911963_25954589_25954690_25955626_25955756_25975069_25975229_25975953_25976029_25982343_25982478_25997359_25997417_26000014_26000183_26021839_26022043_26050999_26051194_26053235_26053349_26089942_26090073_26111978_26112147_26170563
H1_mix_00057890	chr21	-	3583	18	FSM	ENSG00000142192.21	ENST00000346798.8	3583	18	0	0	0	0	multi-exon	FALSE	canonical	3	528	junction_11	192.437937687951	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGTGCTGGTGTGAATG	-5	True	NA	-27	True	AATAAA	-19	NA	26170770	25880549	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_25881772_25891721_25891869_25897572_25897674_25905023_25905078_25911740_25911963_25954589_25954690_25955626_25955756_25975069_25975229_25975953_25976029_25982343_25982478_25997359_25997417_26000014_26000183_26021839_26022043_26050999_26051194_26053235_26053349_26089942_26090073_26111978_26112147_26170563
H1_mix_00057891	chr21	-	3355	16	FSM	ENSG00000142192.21	ENST00000348990.9	3355	16	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_10	261.58995903258	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGTGCTGGTGTGAATG	-2	True	NA	-27	True	AATAAA	-19	NA	26170767	25880549	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_25881772_25891721_25891869_25897572_25897674_25905023_25905078_25911740_25911963_25954589_25954690_25955626_25955756_25975069_25975229_25975953_25976029_25982343_25982478_26021839_26022043_26050999_26051194_26053235_26053349_26089942_26090073_26111978_26112147_26170563
H1_mix_00057892	chr21	-	3543	17	FSM	ENSG00000142192.21	ENST00000357903.7	3543	17	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_10	200.586396208093	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGTGCTGGTGTGAATG	917	False	NA	-27	True	AATAAA	-19	NA	26170787	25880549	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_25881772_25891721_25891869_25897572_25897674_25905023_25905078_25911740_25911963_25954589_25954690_25955626_25955756_25975069_25975229_25975953_25976029_25982343_25982478_26000014_26000183_26021839_26022043_26050999_26051194_26053235_26053349_26089942_26090073_26111978_26112147_26170563
H1_mix_00057893	chr21	-	619	4	FSM	ENSG00000142192.21	ENST00000491395.5	619	4	0	0	0	0	multi-exon	FALSE	canonical	3	528	junction_1	145.977928316426	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAGATGTTGGGCTAAG	2559	False	NA	35	True	NA	NA	NA	26051018	25997187	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_25997417_26000014_26000183_26021839_26022043_26050999
H1_mix_00057895	chr21	-	3108	4	FSM	ENSG00000166265.13	ENST00000652641.2	3099	4	0	-9	0	2	multi-exon	FALSE	canonical	3	152	junction_1	113.877126763894	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTGTCTTGTGTCCATT	-15	True	NA	NA	False	AATAAA	-33	NA	26573286	26466206	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_26468635_26480271_26480430_26566265_26566369_26572867
H1_mix_00057896	chr21	-	3074	4	FSM	ENSG00000166265.13	ENST00000299340.9	3072	4	0	-2	0	2	multi-exon	FALSE	canonical	3	273	junction_1	58.9594964549581	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTGTCTTGTGTCCATT	16	True	NA	NA	False	AATAAA	-33	NA	26573255	26466206	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_26468632_26480271_26480430_26566265_26566369_26572867
H1_mix_00057897	chr21	-	3516	9	FSM	ENSG00000154734.16	ENST00000678221.1	4042	9	34	492	-21	0	multi-exon	FALSE	canonical	1	1	junction_8	30.0642541068293	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTCTGTTTTTTGA	2370	False	NA	-4	True	AATAAA	-16	NA	26843039	26836286	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_26838279_26838438_26838615_26839586_26839763_26839874_26840062_26840275_26840563_26840997_26841166_26841857_26841991_26842338_26842686_26842989
H1_mix_00057898	chr21	-	4981	9	FSM	ENSG00000154734.16	ENST00000284984.8	5183	9	0	202	0	-162	multi-exon	TRUE	canonical	3	67	junction_5	11.8321595661992	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCTGTCAATACCATCTA	0	True	NA	NA	False	AAAAAG	-44	NA	26845409	26835956	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_26838279_26838438_26838615_26839586_26839763_26839874_26840062_26840275_26840563_26840997_26841166_26841857_26841991_26842338_26842686_26844224
H1_mix_00057899	chr21	-	9623	8	FSM	ENSG00000154736.6	ENST00000284987.6	9621	8	0	-2	0	2	multi-exon	FALSE	canonical	1	1	junction_2	0.755928946018454	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGTATGTACTGCATAT	1	True	NA	NA	False	AATAAA	-19	NA	26967088	26917919	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_26924621_26929885_26930062_26932003_26932180_26932860_26933045_26934465_26934750_26943379_26943548_26954738_26954872_26965287
H1_mix_00057900	chr21	-	4877	6	FSM	ENSG00000156239.12	ENST00000303775.10	4861	6	0	-16	0	16	multi-exon	FALSE	canonical	3	66	junction_2	25.1507455157894	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTAATTTTTTCTGGTCA	-3	True	NA	12	True	AATAAA	-33	NA	28885367	28872174	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_28876492_28878191_28878334_28879869_28879954_28882159_28882251_28882984_28883072_28885211
H1_mix_00057901	chr21	-	4909	5	FSM	ENSG00000156239.12	ENST00000351429.7	4781	5	4	-132	0	132	multi-exon	FALSE	canonical	3	43	junction_2	34.2226167906547	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTCGTGTCCAACTGAA	-3	True	NA	NA	False	NA	NA	NA	28885367	28872058	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_28876492_28878191_28878334_28882159_28882251_28882984_28883072_28885211
H1_mix_00057903	chr21	-	7703	30	FSM	ENSG00000198862.14	ENST00000361371.10	7677	30	-26	0	-26	0	multi-exon	FALSE	canonical	2	54	junction_8	16.2545886688742	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCGCCATTCTCCTCC	-1	True	NA	-7	True	AATAAA	-26	NA	28992903	28928143	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_28930511_28931154_28931323_28932469_28932665_28935108_28935330_28936525_28936698_28941219_28941407_28943261_28943337_28943666_28943905_28944382_28944597_28945806_28945952_28946151_28946288_28947463_28947607_28952159_28952265_28953216_28953377_28956761_28956949_28957331_28957477_28958385_28958540_28959457_28959698_28960516_28960707_28965864_28965907_28966369_28967180_28969465_28969602_28970551_28970743_28971270_28971445_28981118_28981300_28982315_28982369_28984691_28984923_28986138_28986238_28986730_28986935_28992763
H1_mix_00057904	chr21	-	303	1	FSM	ENSG00000176054.6	ENST00000320371.6	421	1	82	36	82	-36	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGATTGTGTCCAATGC	4807	False	NA	NA	False	NA	NA	NA	28997951	28997648	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_28997600_28998000
H1_mix_00057905	chr21	-	595	1	FSM	ENSG00000273254.1	ENST00000608809.1	636	1	12	29	12	-29	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATGTCAGAATAAAAAACGC	NA	False	NA	NA	False	NA	NA	NA	29024878	29024283	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_29024300_29024900
H1_mix_00057906	chr21	-	1326	5	FSM	ENSG00000156261.13	ENST00000496121.5	1326	5	0	0	0	0	multi-exon	FALSE	canonical	3	2455	junction_2	179.254707051168	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTGTCTAATGACCACG	1541	False	NA	-20	True	AATAAA	-21	NA	29062867	29056323	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_29056553_29060540_29060661_29061252_29061418_29061495_29061568_29062127
H1_mix_00057907	chr21	-	1872	15	FSM	ENSG00000156261.13	ENST00000470450.5	1872	15	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_14	657.309641102057	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTGTCTAATGACCACG	8	True	NA	-20	True	AATAAA	-21	NA	29073639	29056323	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_29056553_29060540_29060661_29061252_29061418_29061495_29061568_29062127_29062244_29062327_29062416_29062489_29062557_29063351_29063531_29064967_29065106_29066715_29066778_29066890_29067072_29067555_29067706_29069422_29069503_29070246_29070338_29073505
H1_mix_00057908	chr21	-	1854	15	FSM	ENSG00000156261.13	ENST00000286788.9	1854	15	0	0	0	0	multi-exon	FALSE	canonical	3	2129	junction_9	166.806392110673	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTATTGTCTAATGACCA	-1	True	NA	-22	True	AATAAA	-19	NA	29073648	29056325	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_29056553_29060540_29060661_29061252_29061418_29061495_29061568_29062127_29062244_29062327_29062416_29062489_29062557_29063351_29063531_29064967_29065106_29066715_29066778_29066890_29067072_29067555_29067706_29069422_29069503_29070246_29070338_29073530
H1_mix_00057910	chr21	-	7200	29	FSM	ENSG00000156299.14	ENST00000286827.7	7200	29	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_25	13.1661284657074	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCGGTTCTATGCCTTTT	110	False	NA	-5	True	AATAAA	-17	NA	31558977	31118415	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_31120838_31124521_31124695_31127064_31127153_31130212_31130316_31130889_31130949_31135932_31136042_31141117_31141237_31141324_31141505_31146894_31147004_31152635_31152762_31153065_31153135_31154246_31154427_31164961_31165066_31182420_31182646_31187000_31187088_31195223_31195306_31202907_31203013_31210044_31210216_31213397_31213473_31217552_31217700_31223405_31223592_31225725_31225951_31245487_31245661_31251741_31252190_31266009_31266984_31276731_31276909_31339242_31339423_31463982_31464036_31558926
H1_mix_00057911	chr21	-	7523	29	NNC	ENSG00000156299.14	novel	7200	29	NA	NA	-256	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_27	13.9369480306186	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCGGTTCTATGCCTTTT	NA	False	NA	-5	True	AATAAA	-17	NA	31559233	31118415	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_31120838_31124521_31124695_31127064_31127153_31130212_31130316_31130889_31130949_31135932_31136042_31141117_31141237_31141324_31141505_31146894_31147004_31152635_31152762_31153065_31153135_31154246_31154427_31164961_31165066_31182420_31182646_31187000_31187088_31195223_31195306_31202907_31203013_31210044_31210216_31213397_31213473_31217552_31217700_31223405_31223592_31225725_31225951_31245487_31245661_31251741_31252190_31266009_31266984_31276731_31276909_31339242_31339423_31463915_31464036_31558926
H1_mix_00057914	chr21	-	530	1	FSM	ENSG00000273271.1	ENST00000609934.1	520	1	0	-10	0	10	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCCATTTGTCAATTCC	1376	False	NA	6	True	AATAAA	-26	NA	31667247	31666717	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_31666700_31667200
H1_mix_00057915	chr21	-	4269	20	FSM	ENSG00000156304.15	ENST00000286835.12	4269	20	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_2	44.7064912525106	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTGGAAAAGGATTGTTC	-27	True	NA	NA	False	NA	NA	NA	31732118	31670999	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_31672355_31685048_31685241_31685397_31685485_31685567_31685734_31688306_31688465_31690796_31690954_31691816_31691931_31692348_31692450_31693293_31693485_31694203_31694290_31694812_31694981_31696112_31696222_31696568_31696751_31700994_31701172_31701775_31701919_31702243_31702380_31703764_31703927_31705422_31705468_31706273_31706358_31731662
H1_mix_00057916	chr21	-	4127	20	FSM	ENSG00000156304.15	ENST00000399804.5	4127	20	0	0	0	0	multi-exon	TRUE	canonical	3	109	junction_2	76.3584998452363	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAATGTGTGCTATTCTT	16	True	NA	88	True	AATAAA	-19	NA	31732075	31671032	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_31672355_31685048_31685175_31685397_31685485_31685567_31685734_31688306_31688465_31690796_31690954_31691816_31691931_31692348_31692450_31693293_31693485_31694203_31694290_31694812_31694981_31696112_31696222_31696568_31696751_31700994_31701172_31701775_31701919_31702243_31702380_31703764_31703927_31705422_31705468_31706273_31706358_31731662
H1_mix_00057918	chr21	-	1550	7	FSM	ENSG00000156304.15	ENST00000485790.1	1282	7	0	-268	0	268	multi-exon	FALSE	canonical	3	369	junction_2	38.2640678560041	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGGGCACATTACAGTT	9	True	NA	NA	False	AATACA	-12	NA	31731961	31700490	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_31701172_31701775_31701919_31702243_31702380_31703764_31703927_31705422_31705468_31706273_31706358_31731662
H1_mix_00057919	chr21	-	329	3	FSM	ENSG00000230323.6	ENST00000658887.1	1225	3	896	0	896	0	multi-exon	FALSE	canonical	1	1	junction_2	2	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTATAATTTGTTTCTG	NA	False	NA	-5	True	AATAAA	-18	NA	32097574	32080320	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_32080518_32086203_32086296_32097534
H1_mix_00057920	chr21	-	1556	5	FSM	ENSG00000159055.4	ENST00000290130.4	1546	5	0	-10	0	10	multi-exon	FALSE	canonical	3	1026	junction_1	15.2704780540755	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGATTTTTACAAACTGAA	-15	True	NA	-12	True	AATAAA	-23	NA	32279049	32268217	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_32269118_32269706_32269804_32270406_32270530_32274829_32274897_32278680
H1_mix_00057921	chr21	-	10818	39	FSM	ENSG00000142207.7	ENST00000382751.4	10818	39	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_21	21.4633779447175	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGCCTCGGATATGTCTT	6	True	NA	NA	False	ATTAAA	-21	NA	32393012	32311017	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_32315100_32316465_32317066_32317675_32317918_32319216_32319415_32320530_32320641_32321800_32321945_32322477_32322585_32324490_32324603_32325228_32325390_32333316_32333420_32334162_32334335_32337093_32337158_32337403_32337515_32338706_32338901_32341465_32341525_32344569_32344757_32345373_32345576_32346955_32347812_32349303_32349484_32350703_32350923_32352709_32352907_32353932_32354104_32354858_32354998_32355448_32355566_32357536_32357657_32359795_32359909_32361006_32361124_32361891_32362022_32363155_32363330_32366617_32366756_32368402_32368599_32372506_32372632_32373646_32373773_32375397_32375484_32378444_32378542_32383421_32383555_32384312_32384465_32385544_32385685_32392768
H1_mix_00057922	chr21	-	3516	7	FSM	ENSG00000159079.19	ENST00000290155.8	3516	7	0	0	0	0	multi-exon	FALSE	canonical	3	823	junction_6	72.7682775818022	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTTCGACCATCAAACTG	1	True	NA	NA	False	AATAAA	-19	NA	32612377	32599353	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_32601974_32602271_32602368_32603160_32603293_32604124_32604284_32607648_32607717_32609837_32610006_32612104
H1_mix_00057923	chr21	-	1082	6	FSM	ENSG00000159079.19	ENST00000440966.5	1082	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	331.537388540116	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAAATCGTTTTTGTTT	26	True	NA	NA	False	AATAAA	-19	NA	32612352	32601666	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_32601974_32603160_32603293_32604124_32604284_32607648_32607717_32609837_32610006_32612104
H1_mix_00057924	chr21	-	873	3	FSM	ENSG00000159079.19	ENST00000425336.1	873	3	0	0	0	0	multi-exon	FALSE	canonical	3	938	junction_2	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTTTAGAACTTAATAAATA	8649	False	NA	NA	False	TTTAAA	-17	NA	32604200	32601702	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_32602368_32603160_32603293_32604124
H1_mix_00057925	chr21	-	1872	2	FSM	ENSG00000159079.19	ENST00000483315.1	1872	2	0	0	0	0	multi-exon	FALSE	canonical	3	938	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATTATAATTTAAAAAAAAA	-5	True	NA	NA	False	NA	NA	NA	32604513	32601809	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_32603293_32604124
H1_mix_00057927	chr21	-	7269	28	NIC	ENSG00000159082.18	novel	6958	29	NA	NA	-340	-1	combination_of_known_junctions	FALSE	canonical	2	5	junction_24	3.32633009175077	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCTGACTTCTTTGTTA	NA	False	NA	-27	True	AATAAA	-15	NA	32728380	32628763	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_32631802_32638907_32639126_32639670_32639780_32641895_32641967_32645645_32645790_32646392_32646603_32650183_32650347_32653287_32653367_32656686_32656903_32657002_32657121_32657715_32657873_32664912_32665072_32665942_32666136_32666432_32666574_32670287_32670373_32673339_32673532_32678644_32678811_32681495_32681649_32684037_32684120_32685747_32685918_32686977_32687075_32688305_32688368_32694227_32694312_32695056_32695283_32699837_32700106_32701960_32702048_32726771_32726918_32727945
H1_mix_00057928	chr21	-	5850	11	FSM	ENSG00000159086.15	ENST00000466846.5	3879	11	-1845	-126	-1845	125	multi-exon	FALSE	canonical	3	217	junction_10	113.649505058315	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTGCTCTGTTAATTT	4	False	NA	NA	False	NA	NA	NA	32758639	32733773	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_32735068_32737253_32737409_32738172_32738320_32743247_32743315_32743677_32743755_32744791_32744914_32745573_32745719_32748498_32748699_32750916_32751033_32751118_32751219_32755212
H1_mix_00057929	chr21	-	5708	11	ISM	ENSG00000159086.15	ENST00000331923.9	3892	18	13116	0	-1845	0	3prime_fragment	FALSE	canonical	3	166	junction_10	125.044152202332	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGTTGTATTTTCCTG	4	False	NA	NA	False	ATTAAA	-17	NA	32758639	32733898	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr21_-_32735068_32737253_32737409_32738172_32738320_32743247_32743315_32743677_32743755_32744791_32744914_32745573_32745719_32748498_32748699_32750916_32751033_32751118_32751219_32755229
H1_mix_00057930	chr21	-	3892	18	FSM	ENSG00000159086.15	ENST00000331923.9	3892	18	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_11	178.64234241968	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGTTGTATTTTCCTG	1	True	NA	NA	False	ATTAAA	-17	NA	32771755	32733898	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_32735068_32737253_32737409_32738172_32738320_32743247_32743315_32743677_32743755_32744791_32744914_32745573_32745719_32748498_32748699_32750916_32751033_32751118_32751219_32755229_32755354_32759079_32759270_32759776_32759995_32761058_32761163_32762095_32762318_32764347_32764525_32769813_32769943_32771325
H1_mix_00057931	chr21	-	6113	17	NIC	ENSG00000159086.15	novel	3892	18	NA	NA	0	-1	intron_retention	FALSE	canonical	3	115	junction_10	169.976836657234	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCTTTGTTGTATTTTCC	247	False	32771815	NA	False	ATTAAA	-15	NA	32771792	32733900	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_32737409_32738172_32738320_32743247_32743315_32743677_32743755_32744791_32744914_32745573_32745719_32748498_32748699_32750916_32751033_32751118_32751219_32755229_32755354_32759079_32759270_32759776_32759995_32761058_32761163_32762095_32762318_32764347_32764525_32769813_32769943_32771325
H1_mix_00057932	chr21	-	4640	10	FSM	ENSG00000159086.15	ENST00000497873.1	2277	10	-1323	-1040	-1323	113	multi-exon	FALSE	canonical	3	404	junction_3	83.7811670401964	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTCATGCACTGTATTTG	5196	False	NA	NA	False	NA	NA	NA	32753447	32733785	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_32735068_32737253_32737409_32738172_32738320_32743247_32743315_32743677_32743755_32744791_32744914_32745573_32745719_32748498_32748699_32750916_32751033_32751118
H1_mix_00057933	chr21	-	2564	16	FSM	ENSG00000159086.15	ENST00000290178.4	2564	16	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	165.414012573166	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGTTACATAAAACTGTG	-2	True	NA	-54	True	NA	NA	NA	32771668	32741392	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_32741623_32743247_32743315_32743677_32743755_32744791_32744914_32745573_32745719_32748498_32748699_32750916_32751033_32751118_32751219_32755229_32755354_32759079_32759270_32759776_32759995_32761058_32761163_32762095_32762318_32764347_32764525_32769813_32769943_32771325
H1_mix_00057934	chr21	-	3061	9	FSM	ENSG00000142188.17	ENST00000420455.5	3062	9	0	1	0	-1	multi-exon	FALSE	canonical	3	81	junction_2	49.1928602543093	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAAGCTCATTATTCCTG	10	True	NA	-4	True	AATAAA	-44	NA	33479943	33432485	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33432803_33439213_33439298_33448781_33450864_33455726_33455785_33460412_33460506_33465341_33465410_33467009_33467123_33468786_33468927_33479837
H1_mix_00057935	chr21	-	2332	7	FSM	ENSG00000142188.17	ENST00000542230.7	2332	7	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	34.6538437823121	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAATATTGTTGTTTGTT	-21	True	NA	-4	True	AATAAA	-17	NA	33479974	33449140	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33450864_33455726_33455785_33460412_33460506_33465341_33465410_33467009_33467123_33468786_33468927_33479837
H1_mix_00057937	chr21	-	569	1	FSM	ENSG00000215088.3	ENST00000414617.1	616	1	-27	74	-27	-74	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGCCTCCTCCAGCTCC	9504	False	NA	NA	False	NA	NA	NA	33482222	33481653	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33481700_33482200
H1_mix_00057938	chr21	-	1892	2	FSM	ENSG00000177692.12	ENST00000381947.4	1485	2	-16	-391	-16	391	multi-exon	FALSE	canonical	3	26	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTAGCCAGGATGGTCT	-6	True	NA	NA	False	NA	NA	NA	33491732	33487663	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33489425_33491601
H1_mix_00057939	chr21	-	1539	2	FSM	ENSG00000177692.12	ENST00000314399.3	1625	2	86	0	86	0	multi-exon	FALSE	canonical	1	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTAGTTCCACTGACACT	9	True	NA	NA	False	ATTAAA	-35	NA	33491387	33488207	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33489425_33491065
H1_mix_00057940	chr21	-	1297	2	NNC	ENSG00000177692.12	novel	1485	2	NA	NA	4	3	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATCATTCTTAGTTCCA	14	True	NA	NA	False	ATTAAA	-27	NA	33491712	33488215	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_33489425_33491624
H1_mix_00057941	chr21	-	3490	22	FSM	ENSG00000159131.17	ENST00000381831.7	3490	22	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_21	411.157522047825	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTTTTCTTGGTCTTTT	14	True	NA	-7	True	AATAGA	-45	NA	33542842	33503930	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33504316_33504411_33504528_33505560_33505703_33505973_33506105_33509782_33509921_33511251_33511459_33516988_33517142_33517356_33517609_33520363_33520563_33520905_33521016_33522187_33522283_33524768_33525001_33528166_33528336_33528518_33528605_33528849_33528938_33530758_33530885_33531488_33531558_33532344_33532457_33534578_33534754_33535224_33535321_33539170_33539324_33542586
H1_mix_00057942	chr21	-	3320	22	FSM	ENSG00000159131.17	ENST00000381815.9	3318	22	0	-2	0	0	multi-exon	FALSE	canonical	3	773	junction_10	317.746515437325	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTTTTCTTGGTCTTTT	-6	True	NA	-7	True	AATAGA	-45	NA	33542117	33503930	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33504316_33504411_33504528_33505560_33505703_33505973_33506105_33509782_33509921_33511251_33511459_33516988_33517142_33517356_33517609_33520363_33520563_33520905_33521016_33522187_33522283_33524768_33525001_33528166_33528336_33528518_33528605_33528849_33528938_33530758_33530885_33531488_33531558_33532344_33532457_33534578_33534754_33535224_33535321_33539170_33539357_33542064
H1_mix_00057943	chr21	-	1034	2	FSM	ENSG00000159131.17	ENST00000487155.1	786	2	0	-248	0	248	multi-exon	FALSE	canonical	3	1046	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGAACTGGAGGCCATTAT	NA	False	NA	NA	False	AATAAA	-25	NA	33511304	33508939	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33509921_33511251
H1_mix_00057944	chr21	-	368	1	FSM	ENSG00000233956.1	ENST00000448054.1	499	1	469	-338	469	338	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGACCTGATCCACCTGC	NA	False	NA	NA	False	NA	NA	NA	33518639	33518271	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33518300_33518600
H1_mix_00057945	chr21	-	2153	11	FSM	ENSG00000159131.17	ENST00000361093.9	2149	11	0	-4	0	4	multi-exon	FALSE	canonical	3	1481	junction_10	94.1119014790372	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTTTTGATTTCTTTTTT	-3	True	NA	0	True	AATAAA	-19	NA	33542114	33524004	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33525001_33528166_33528336_33528518_33528605_33528849_33528938_33530758_33530885_33531488_33531558_33532344_33532457_33534578_33534754_33535224_33535321_33539170_33539357_33542064
H1_mix_00057946	chr21	-	654	3	FSM	ENSG00000159131.17	ENST00000466882.1	654	3	0	0	0	0	multi-exon	FALSE	canonical	3	1684	junction_1	6.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCTAGAGTTTAATTGC	NA	False	NA	NA	False	AATGAA	-44	NA	33531282	33528562	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33528605_33528849_33528938_33530758
H1_mix_00057947	chr21	-	457	4	FSM	ENSG00000159131.17	ENST00000497313.5	457	4	0	0	0	0	multi-exon	FALSE	canonical	3	1493	junction_2	1.24721912892465	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAACTCTTAGATGATACT	8207	False	NA	NA	False	NA	NA	NA	33534679	33530709	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33530885_33531488_33531558_33532344_33532457_33534578
H1_mix_00057951	chr21	-	2046	2	FSM	ENSG00000159147.18	ENST00000460557.1	786	2	-843	-417	-843	29	multi-exon	FALSE	canonical	3	301	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAACCCAGAAAATAAAACA	8650	False	NA	-37	True	AAGAAA	-29	NA	33580457	33577506	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33578445_33579349
H1_mix_00057952	chr21	-	2500	10	FSM	ENSG00000159147.18	ENST00000303071.10	2500	10	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_4	36.1389636176527	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATTGGGTAAAGAAATAAT	-4	True	NA	-5	True	AATAAA	-19	NA	33588684	33577550	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33578445_33579349_33579563_33581301_33581501_33581950_33582056_33582164_33582247_33583487_33583667_33584589_33584769_33585977_33586182_33587521_33587603_33588320
H1_mix_00057953	chr21	-	2141	8	NIC	ENSG00000159147.18	novel	2500	10	NA	NA	1	-87	combination_of_known_junctions	FALSE	canonical	3	15	junction_4	94.09678039993	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	-3	True	NA	-102	True	NA	NA	NA	33588683	33577647	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_33578445_33579349_33579563_33581301_33581501_33581950_33582056_33584589_33584769_33585977_33586182_33587521_33587603_33588320
H1_mix_00057954	chr21	-	1584	8	FSM	ENSG00000159147.18	ENST00000442660.5	1566	8	0	-18	0	0	multi-exon	FALSE	canonical	3	21	junction_5	92.8516481890794	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATACAGACAACATCTAC	8126	False	NA	-46	True	CATAAA	-10	NA	33587602	33577923	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33578445_33579349_33579563_33581301_33581501_33581950_33582056_33582164_33582247_33584589_33584769_33585977_33586182_33587521
H1_mix_00057956	chr21	-	1597	13	FSM	ENSG00000205758.12	ENST00000381554.8	1598	13	21	-20	0	20	multi-exon	FALSE	canonical	0	0	junction_2	98.9453763447287	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCACTCCGGCTTTCCCCA	2212	False	NA	21	True	NA	NA	NA	33641720	33589320	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33589922_33591161_33591208_33595730_33595837_33597279_33597402_33599149_33599249_33602233_33602346_33603403_33603538_33613537_33613607_33616705_33616751_33621995_33622069_33624682_33624761_33631485_33631558_33641680
H1_mix_00057957	chr21	-	2419	2	FSM	ENSG00000205758.12	ENST00000468349.1	1018	2	-1326	-75	-1326	0	multi-exon	FALSE	canonical	3	150	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATATTTTGAAGTCTTAA	2684	False	NA	-44	True	NA	NA	NA	33593044	33589385	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33589922_33591161
H1_mix_00057958	chr21	-	1488	13	FSM	ENSG00000205758.12	ENST00000381540.7	1482	13	0	-6	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	98.9453763447287	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACGTATTAATTTTGTAT	-5	True	NA	-21	True	GATAAA	-32	NA	33641747	33589460	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33589922_33591161_33591212_33595730_33595837_33597279_33597402_33599149_33599249_33602233_33602346_33603403_33603538_33613537_33613607_33616705_33616751_33621995_33622069_33624682_33624761_33631485_33631558_33641680
H1_mix_00057959	chr21	-	1419	13	NIC	ENSG00000205758.12	novel	1482	13	NA	NA	-6	26	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_1	120.063264573307	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTTTCATTGTTTCTA	2008	False	NA	-7	True	NA	NA	NA	33641924	33589590	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_33589806_33591161_33591212_33595730_33595837_33597279_33597402_33599149_33599249_33602233_33602346_33603403_33603538_33613537_33613607_33616705_33616751_33621995_33622069_33624682_33624761_33631485_33631558_33641680
H1_mix_00057960	chr21	-	595	6	FSM	ENSG00000205758.12	ENST00000437996.5	595	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	104.317975440477	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTTCTTTGGAAATTG	NA	False	NA	-65	True	NA	NA	NA	33602265	33589768	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33589922_33591161_33591208_33595730_33595837_33597279_33597402_33599149_33599286_33602233
H1_mix_00057963	chr21	-	641	6	FSM	ENSG00000205758.12	ENST00000413017.2	627	6	0	-14	0	14	multi-exon	FALSE	canonical	3	27	junction_1	129.777347792286	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAATTTACTGTCAAATT	2210	False	NA	-4	True	AATAAA	-27	NA	33641722	33616272	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33616604_33616705_33616751_33621995_33622069_33624682_33624761_33631485_33631558_33641680
H1_mix_00057964	chr21	-	623	3	FSM	ENSG00000205758.12	ENST00000399442.1	612	3	0	-11	0	11	multi-exon	FALSE	canonical	2	5	junction_1	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTGAATTAGTAAATATT	2211	False	NA	NA	False	AATAAA	-24	NA	33641721	33639733	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33640189_33641178_33641306_33641680
H1_mix_00057965	chr21	-	583	6	FSM	ENSG00000241837.7	ENST00000431254.5	583	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	1729.64789480403	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGTTCACTGTCTTTT	58	False	NA	-27	True	AATAAA	-20	NA	33915761	33903452	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33903640_33903934_33904022_33907340_33907454_33912288_33912400_33914449_33914501_33915727
H1_mix_00057966	chr21	-	756	7	FSM	ENSG00000241837.7	ENST00000290299.7	756	7	0	0	0	0	multi-exon	FALSE	canonical	3	3758	junction_6	292.625281812005	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGTTCACTGTCTTTT	15	False	33915819	-27	True	AATAAA	-20	NA	33915804	33903452	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33903640_33903934_33904022_33907340_33907454_33909081_33909212_33912288_33912400_33914449_33914501_33915727
H1_mix_00057967	chr21	-	502	2	FSM	ENSG00000273102.2	ENST00000607953.2	592	2	95	-5	95	5	multi-exon	FALSE	canonical	3	23	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGGTAATACGTGTTAT	NA	False	NA	1	True	AATAAA	-24	NA	33968478	33967094	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33967351_33968232
H1_mix_00057968	chr21	-	545	1	FSM	ENSG00000224598.1	ENST00000415238.1	640	1	176	-81	176	81	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCGGCTCTCATATACA	NA	False	NA	NA	False	NA	NA	NA	34135895	34135350	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_34135400_34135900
H1_mix_00057970	chr21	-	2463	4	FSM	ENSG00000159200.18	ENST00000313806.9	2503	4	0	40	0	2	multi-exon	FALSE	canonical	3	46	junction_2	1.63299316185545	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATTTTATTTCTAGAAT	6	True	NA	2	True	AATAAA	-30	NA	34615113	34516481	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_34518257_34521498_34521659_34523536_34523711_34614759
H1_mix_00057971	chr21	-	6475	3	NNC	ENSG00000185917.14	novel	3358	5	NA	NA	2207	239	intron_retention	FALSE	canonical	3	46	junction_2	51	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAGGCCAGAGGATGGCT	NA	False	NA	NA	False	NA	NA	NA	36041166	36034301	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_36035961_36036084_36036252_36036517
H1_mix_00057972	chr21	-	6502	2	ISM	ENSG00000185917.14	ENST00000487297.5	3358	5	2207	-1	2207	0	intron_retention	FALSE	canonical	3	148	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTCATTGTGCTTTCCT	NA	False	NA	-7	True	ATTAAA	-17	NA	36041166	36034540	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr21_-_36035961_36036084
H1_mix_00057973	chr21	-	3359	5	FSM	ENSG00000185917.14	ENST00000487297.5	3358	5	0	-1	0	0	multi-exon	FALSE	canonical	3	126	junction_2	17.5712833908056	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTCATTGTGCTTTCCT	NA	False	NA	-7	True	ATTAAA	-17	NA	36043373	36034540	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_36035961_36036084_36036252_36038149_36038274_36040574_36040656_36041806
H1_mix_00057974	chr21	-	4369	10	FSM	ENSG00000185917.14	ENST00000399215.5	4272	10	0	-97	0	97	multi-exon	TRUE	canonical	3	57	junction_4	77.2405254088299	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGATCTCTTGAGCCCAG	6	True	NA	90	True	NA	NA	NA	36060261	36034443	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_36036252_36038149_36038274_36040574_36040656_36041806_36041889_36043781_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36058815
H1_mix_00057975	chr21	-	3130	13	NNC	ENSG00000185917.14	novel	2991	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_12	91.3933425122178	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTCATTGTGCTTTCCT	255	False	NA	-7	True	ATTAAA	-17	NA	36060300	36034540	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_36035961_36036084_36036252_36038149_36038274_36040574_36040656_36041806_36041889_36043400_36043652_36043781_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36058815_36058974_36060281
H1_mix_00057976	chr21	-	2858	11	FSM	ENSG00000185917.14	ENST00000481477.5	2761	11	0	-97	0	97	multi-exon	FALSE	canonical	3	20	junction_7	87.7784142030374	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGATCTCTTGAGCCCAG	170	False	NA	90	True	NA	NA	NA	36060385	36034443	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_36035961_36036084_36036252_36038149_36038274_36040574_36040656_36041806_36041889_36043781_36043957_36045581_36046012_36053582_36053621_36057108_36057205_36058815_36058925_36060346
H1_mix_00057977	chr21	-	3105	11	NIC	ENSG00000185917.14	novel	2991	12	NA	NA	10	0	intron_retention	FALSE	canonical	3	57	junction_4	73.9380822039631	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTCATTGTGCTTTCCT	-17	True	NA	-7	True	ATTAAA	-17	NA	36060516	36034540	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_36036252_36038149_36038274_36040574_36040656_36041806_36041889_36043781_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36058815_36058925_36060346
H1_mix_00057978	chr21	-	3075	13	NIC	ENSG00000185917.14	novel	2991	12	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_5	85.7918589118779	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTCATTGTGCTTTCCT	-17	True	NA	-7	True	ATTAAA	-17	NA	36060516	36034540	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_36035961_36036084_36036252_36038149_36038274_36040574_36040656_36041806_36041889_36043781_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36057383_36057478_36058815_36058925_36060346
H1_mix_00057979	chr21	-	3281	13	NNC	ENSG00000185917.14	novel	2991	12	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_12	85.6217051271983	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTCATTGTGCTTTCCT	-17	True	NA	-7	True	ATTAAA	-17	NA	36060516	36034540	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_36035961_36036084_36036252_36038149_36038274_36040574_36040656_36041806_36041889_36043400_36043652_36043781_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36058815_36058974_36060346
H1_mix_00057980	chr21	-	3088	12	FSM	ENSG00000185917.14	ENST00000332131.9	2991	12	0	-97	0	97	multi-exon	FALSE	canonical	3	57	junction_5	72.6041002416587	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGATCTCTTGAGCCCAG	-27	True	NA	90	True	NA	NA	NA	36060526	36034443	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_36035961_36036084_36036252_36038149_36038274_36040574_36040656_36041806_36041889_36043781_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36058815_36058925_36060346
H1_mix_00057982	chr21	-	1208	8	FSM	ENSG00000185917.14	ENST00000399205.5	1208	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	117.818781635707	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACTGACATACATATCAC	13	True	NA	-9	True	AATAAA	-15	NA	36060313	36043685	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36057383_36057478_36058815_36058974_36060281
H1_mix_00057983	chr21	-	1165	7	FSM	ENSG00000185917.14	ENST00000399208.6	1165	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	101.944020586464	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACTGACATACATATCAC	191	False	NA	-9	True	AATAAA	-15	NA	36060364	36043685	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36058815_36058974_36060281
H1_mix_00057984	chr21	-	1521	8	NIC	ENSG00000185917.14	novel	1212	8	NA	NA	24	-3	combination_of_known_splicesites	FALSE	canonical	3	15	junction_7	115.14711087499	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAAGACTGACATACATAT	337	False	NA	-12	True	AATAAA	-12	NA	36060218	36043688	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36057383_36057478_36058815_36058925_36059821
H1_mix_00057987	chr21	-	592	1	Genic_Genomic	ENSG00000236830.8	novel	NA	NA	NA	NA	2088	440	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCTACACTGGCTCGAC	3652	False	NA	NA	False	NA	NA	NA	36131918	36131326	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr21_-_36131300_36131900
H1_mix_00057988	chr21	-	492	1	FSM	ENSG00000273199.1	ENST00000608391.1	879	1	41	346	41	-346	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCGCCTCCAGGCAATG	186	False	NA	NA	False	NA	NA	NA	36320629	36320137	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_36320100_36320600
H1_mix_00057989	chr21	-	8309	11	FSM	ENSG00000159267.17	ENST00000674895.3	8273	11	-38	2	-38	-2	multi-exon	FALSE	canonical	3	36	junction_10	14.3878420897645	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCTTGAATGACTTTTAA	NA	False	NA	-18	True	AATAAA	-15	NA	36966707	36748627	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_36754418_36756541_36756756_36759726_36759842_36765011_36765173_36767217_36767286_36896859_36897132_36930250_36930434_36936448_36937393_36938831_36938995_36962035_36962171_36966443
H1_mix_00057990	chr21	-	8132	11	NIC	ENSG00000159267.17	novel	6010	12	NA	NA	-4	2	combination_of_known_junctions	FALSE	canonical	3	32	junction_10	15.2541797550704	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGAATGACTTTTAAAGAC	-21	True	NA	-14	True	AATAAA	-19	NA	36990240	36748623	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_36754418_36756541_36756756_36759726_36759842_36765011_36765173_36767217_36767286_36896859_36897132_36930250_36930434_36936448_36937393_36938831_36938995_36962035_36962171_36990157
H1_mix_00057991	chr21	-	659	5	NNC	ENSG00000185808.14	novel	688	5	NA	NA	0	55445	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	80.0281200578897	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGAATCTTTCTCCTGCC	17	True	NA	NA	False	NA	NA	NA	37072537	37007400	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_37007427_37065375_37065713_37067261_37067381_37069551_37069625_37072433
H1_mix_00057992	chr21	-	3437	4	FSM	ENSG00000185808.14	ENST00000464265.5	3437	4	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_3	35.4620297720753	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGTAGAATTGTTTTACAT	487	False	NA	NA	False	AAAACA	-17	NA	37072811	37062845	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_37065713_37067261_37067381_37069551_37069625_37072433
H1_mix_00057993	chr21	-	1104	3	FSM	ENSG00000185808.14	ENST00000329667.7	562	3	0	-542	0	542	multi-exon	FALSE	canonical	2	6	junction_2	101	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGAGAATGTGGTCCCAG	17	True	NA	NA	False	NA	NA	NA	37072537	37064831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_37065713_37067261_37067381_37072433
H1_mix_00057994	chr21	-	1230	5	FSM	ENSG00000185808.14	ENST00000399102.5	688	5	0	-542	0	542	multi-exon	FALSE	canonical	3	21	junction_4	71.7160198282085	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGAGAATGTGGTCCCAG	398	False	NA	NA	False	NA	NA	NA	37072900	37064831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_37065713_37067261_37067381_37069551_37069625_37072433_37072538_37072847
H1_mix_00057995	chr21	-	950	6	NIC	ENSG00000185808.14	novel	972	6	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_5	80.3218525682768	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGCAGACTTAAAAAAAAAA	302	False	NA	-4	True	AATAAA	-21	NA	37072996	37065373	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_37065713_37067261_37067381_37069551_37069625_37072144_37072311_37072433_37072538_37072847
H1_mix_00057996	chr21	-	1249	5	FSM	ENSG00000185808.14	ENST00000360525.9	707	5	0	-542	0	542	multi-exon	FALSE	canonical	3	121	junction_4	37.49249924985	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGAGAATGTGGTCCCAG	-2	True	NA	NA	False	NA	NA	NA	37073071	37064831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_37065713_37067261_37067381_37069551_37069625_37072433_37072538_37072999
H1_mix_00057997	chr21	-	1514	6	FSM	ENSG00000185808.14	ENST00000399098.5	972	6	0	-542	0	542	multi-exon	FALSE	canonical	3	34	junction_4	70.7926549862343	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGAGAATGTGGTCCCAG	128	False	NA	NA	False	NA	NA	NA	37073170	37064831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_37065713_37067261_37067381_37069551_37069625_37072144_37072311_37072433_37072538_37072999
H1_mix_00057999	chr21	-	3058	8	FSM	ENSG00000157538.14	ENST00000309117.11	3056	8	0	-2	0	0	multi-exon	FALSE	canonical	3	342	junction_4	35.7947664627449	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGCTTTCCTTAGAGAA	-1	True	NA	NA	False	AATAAA	-22	NA	37267334	37223419	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_37225627_37227653_37227807_37228222_37228374_37232376_37232452_37233361_37233443_37238459_37238610_37240495_37240640_37267237
H1_mix_00058000	chr21	-	821	5	FSM	ENSG00000157538.14	ENST00000399001.5	821	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	161.258139329461	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATTTCACAGAAAACATTG	-18	True	NA	-26	True	NA	NA	NA	37267351	37225298	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_37225627_37227653_37227807_37228222_37228374_37232376_37232452_37267237
H1_mix_00058007	chr21	-	959	2	FSM	ENSG00000157538.14	ENST00000498789.1	959	2	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTATTCCTGGGCCTG	-7	True	NA	-15	True	ATTAAA	-18	NA	37267340	37261081	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_37261938_37267237
H1_mix_00058008	chr21	-	2107	2	Antisense	novelGene_ENSG00000157540.22_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCCCACAACAAACCTCAA	NA	False	NA	NA	False	NA	NA	NA	37589647	37519736	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr21_-_37519760_37587563
H1_mix_00058009	chr21	-	1158	2	Intergenic	novelGene_835	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	357	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACTCTACCTTATTCTTT	NA	False	NA	NA	False	AATAAA	-7	NA	37592156	37582024	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr21_-_37582975_37591948
H1_mix_00058010	chr21	-	1846	7	FSM	ENSG00000183527.12	ENST00000331573.8	1754	7	-37	-55	0	55	multi-exon	FALSE	canonical	3	683	junction_3	75.6651982236366	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTCTTATCTCTTCTGCT	-8	True	NA	NA	False	AATAAA	-22	NA	39183488	39174713	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_39175665_39177434_39177572_39178448_39178648_39179923_39179987_39180284_39180437_39181771_39181879_39183251
H1_mix_00058012	chr21	-	907	6	FSM	ENSG00000183527.12	ENST00000380900.2	907	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	336.843821377207	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAAACATTGTTTTGTAG	-8	True	NA	NA	False	AAGAAA	-43	NA	39183488	39175589	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_39175665_39177434_39177572_39178448_39178648_39180284_39180437_39181771_39181879_39183251
H1_mix_00058013	chr21	-	10141	42	FSM	ENSG00000185658.14	ENST00000333229.6	10141	42	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	72.3951825940079	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAAGCGCTGTATTTCTTGC	7805	False	NA	-1	True	AGTAAA	-22	NA	39313819	39184175	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_39187418_39196497_39197416_39198762_39199663_39200218_39200387_39202324_39202546_39206107_39206275_39209994_39210148_39210785_39210930_39212665_39212708_39213480_39213554_39215236_39215363_39218151_39218273_39218504_39218661_39224407_39224470_39225085_39225198_39228499_39228583_39229311_39229437_39232176_39232285_39232372_39232499_39236594_39236785_39238478_39238574_39247700_39247833_39250795_39250890_39255644_39255829_39258486_39258673_39264459_39264686_39264890_39265020_39269898_39270034_39270282_39270434_39274373_39274473_39276172_39276214_39277250_39277352_39278742_39278814_39280147_39280249_39293810_39294033_39295742_39295904_39296264_39296364_39298431_39298583_39312840_39312901_39313071_39313102_39313240_39313300_39313442
H1_mix_00058014	chr21	-	19029	41	FSM	ENSG00000185658.14	ENST00000342449.8	17728	41	0	-1301	0	-5	multi-exon	FALSE	canonical	3	57	junction_7	71.9516808351271	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCACGAAGCGCTGTATTT	5	True	NA	-6	True	AGTAAA	-17	NA	39313632	39184180	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_39197416_39198762_39199663_39200218_39200387_39202324_39202546_39206107_39206275_39209994_39210148_39210785_39210930_39212665_39212708_39213480_39213554_39215236_39215363_39218151_39218273_39218504_39218661_39224407_39224470_39225085_39225198_39228499_39228583_39229311_39229437_39232176_39232285_39232372_39232499_39236594_39236785_39238478_39238574_39247700_39247833_39250795_39250890_39255644_39255829_39258486_39258673_39264459_39264686_39264890_39265020_39269898_39270034_39270282_39270434_39274373_39274473_39276172_39276214_39277250_39277352_39278742_39278814_39280147_39280249_39293810_39294033_39295742_39295904_39296264_39296364_39298431_39298583_39312840_39312901_39313071_39313102_39313240_39313300_39313442
H1_mix_00058015	chr21	-	2495	5	FSM	ENSG00000185658.14	ENST00000341322.4	2495	5	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_1	25.043711785596	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTAAGTATTCTATAAAATC	-5	True	NA	32	True	AATAAA	-18	NA	39313642	39296436	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_39298583_39312840_39312901_39313071_39313102_39313240_39313300_39313442
H1_mix_00058016	chr21	-	1324	7	FSM	ENSG00000205581.11	ENST00000288344.14	1303	7	0	-21	0	21	multi-exon	FALSE	canonical	3	93	junction_3	2305.70847150188	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGTTTAAATTTTATTT	391	False	NA	-19	True	AATAAA	-40	NA	39348991	39342293	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_39343160_39345145_39345275_39345829_39345959_39348291_39348340_39348421_39348452_39348544_39348578_39348902
H1_mix_00058017	chr21	-	1292	6	FSM	ENSG00000205581.11	ENST00000380749.10	1271	6	0	-21	0	21	multi-exon	FALSE	canonical	3	4780	junction_5	464.507653327693	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGTTTAAATTTTATTT	-1	True	NA	-19	True	AATAAA	-40	NA	39349088	39342293	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_39343160_39345145_39345275_39348291_39348340_39348421_39348452_39348544_39348578_39348902
H1_mix_00058018	chr21	-	4320	5	FSM	ENSG00000205581.11	ENST00000486741.5	4299	5	0	-21	0	21	multi-exon	FALSE	canonical	3	4780	junction_4	512.594137695702	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGTTTAAATTTTATTT	-12	True	NA	-19	True	AATAAA	-40	NA	39349099	39342293	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_39343160_39345145_39348340_39348421_39348452_39348544_39348578_39348902
H1_mix_00058019	chr21	-	1573	8	FSM	ENSG00000205581.11	ENST00000431390.5	1552	8	0	-21	0	21	multi-exon	FALSE	canonical	3	47	junction_3	2488.21822161308	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGTTTAAATTTTATTT	242	False	NA	-19	True	AATAAA	-40	NA	39349140	39342293	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_39343160_39345145_39345275_39345829_39345959_39347378_39347479_39348291_39348340_39348421_39348452_39348544_39348578_39348902
H1_mix_00058024	chr21	-	1074	3	FSM	ENSG00000184809.13	ENST00000380612.8	1071	3	0	-3	0	3	multi-exon	FALSE	canonical	3	20	junction_1	84.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGTCTTGTGTATTTCTT	826	False	NA	NA	False	ATTAAA	-21	NA	39612441	39597143	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_39597990_39609582_39609666_39612296
H1_mix_00058025	chr21	-	3760	3	NIC	ENSG00000184809.13	novel	2340	5	NA	NA	17	0	intron_retention	FALSE	canonical	3	20	junction_1	84.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTAGTCTTGTGTATTT	427	False	NA	NA	False	ATTAAA	-18	NA	39612840	39597146	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_39600280_39609582_39609666_39612296
H1_mix_00058026	chr21	-	3860	4	FSM	ENSG00000184809.13	ENST00000670049.1	3846	4	0	-14	0	0	multi-exon	FALSE	canonical	2	14	junction_1	80.0291613517639	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCCAGAACTATGAGTCAA	10	True	NA	NA	False	NA	NA	NA	39612857	39597188	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_39600280_39601418_39601544_39609582_39609666_39612296
H1_mix_00058027	chr21	-	4202	3	FSM	ENSG00000184809.13	ENST00000661806.1	4202	3	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	51.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTAAAATAAATGCAAGGGA	357	False	NA	NA	False	NA	NA	NA	39612910	39602842	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_39606348_39609582_39609666_39612296
H1_mix_00058028	chr21	-	4025	3	FSM	ENSG00000184809.13	ENST00000329618.7	3106	3	372	-1291	0	0	multi-exon	FALSE	canonical	3	14	junction_1	87.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTAAAATAAATGCAAGGGA	763	False	NA	NA	False	NA	NA	NA	39612504	39602842	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_39606577_39609582_39609666_39612296
H1_mix_00058029	chr21	-	4452	3	FSM	ENSG00000184809.13	ENST00000380604.8	1823	3	-1001	-1628	-595	0	multi-exon	FALSE	canonical	3	21	junction_1	84	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTAAAATAAATGCAAGGGA	NA	False	NA	NA	False	NA	NA	NA	39613505	39602842	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_39606003_39609582_39609666_39612296
H1_mix_00058030	chr21	-	2936	18	ISM	ENSG00000171587.15	ENST00000404019.2	5374	29	41282	65791	41282	-65791	internal_fragment	FALSE	canonical	2	6	junction_12	5.26659512602339	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGTAAGCTGGCTGGCT	NA	False	NA	NA	False	NA	NA	NA	40312372	40078691	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr21_-_40078978_40080151_40080341_40083907_40084007_40085601_40085766_40087169_40087288_40093720_40093875_40124194_40124329_40133853_40134010_40142557_40142705_40144490_40144732_40167217_40167289_40178926_40179095_40187130_40187260_40187890_40187988_40189041_40189239_40276096_40276271_40296054_40296175_40312080
H1_mix_00058031	chr21	-	3454	14	FSM	ENSG00000184012.14	ENST00000332149.10	3450	14	0	-4	0	-1	multi-exon	TRUE	canonical	3	41	junction_13	29.8530919770753	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGAAGTTTATTGGATT	-2	True	NA	NA	False	AATAAA	-28	NA	41508158	41464300	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_41466154_41467733_41467887_41468395_41468539_41470647_41470744_41471805_41471982_41473324_41473497_41476576_41476621_41479171_41479283_41480475_41480603_41488393_41488514_41489506_41489594_41494355_41494579_41498118_41498190_41508080
H1_mix_00058032	chr21	-	3317	14	FSM	ENSG00000184012.14	ENST00000678959.1	3326	14	0	9	0	-9	multi-exon	FALSE	canonical	2	4	junction_11	40.1026788640236	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGCAATTTACAAAAGAAAGA	-2	True	NA	NA	False	AATAAA	-15	NA	41508158	41464313	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_41466154_41467733_41467887_41468395_41468539_41470647_41470744_41471805_41471982_41473324_41473497_41476576_41476621_41479171_41479283_41480475_41480603_41488393_41488514_41489506_41489594_41494479_41494579_41498118_41498190_41508080
H1_mix_00058033	chr21	-	3160	12	FSM	ENSG00000184012.14	ENST00000678743.1	3156	12	0	-4	0	-1	multi-exon	FALSE	canonical	3	9	junction_11	38.3306622617127	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGAAGTTTATTGGATT	-2	True	NA	NA	False	AATAAA	-28	NA	41508158	41464300	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_41466154_41467733_41467887_41468395_41468539_41470647_41470744_41471805_41471982_41473324_41473497_41476576_41476621_41479171_41479283_41480475_41480603_41488393_41488514_41489506_41489594_41508080
H1_mix_00058034	chr21	-	3240	14	FSM	ENSG00000184012.14	ENST00000398585.7	3240	14	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_13	26.0093292320389	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACTGCATCTTTGAAGT	4034	False	NA	0	True	AATAAA	-24	NA	41508065	41464552	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_41466154_41467733_41467887_41468395_41468539_41470647_41470744_41471805_41471982_41473324_41473497_41476576_41476621_41479171_41479283_41480475_41480603_41488393_41488514_41489506_41489594_41494355_41494579_41498118_41498190_41507949
H1_mix_00058037	chr21	-	1226	4	NNC	ENSG00000236384.7	novel	2033	6	NA	NA	-522	59	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_1	41.3628926562068	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATAGATGTATTTCATGT	NA	False	NA	-11	True	AATAAA	-21	NA	41714577	41711460	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_41712045_41712815_41713001_41714019_41714133_41714233
H1_mix_00058039	chr21	-	1557	4	NIC	ENSG00000236384.7	novel	560	4	NA	NA	-524	59	combination_of_known_splicesites	FALSE	canonical	3	42	junction_1	40.4749579644281	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATAGATGTATTTCATGT	NA	False	NA	-11	True	AATAAA	-21	NA	41714579	41711460	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_41712374_41712815_41713001_41714019_41714133_41714233
H1_mix_00058040	chr21	-	1324	4	NNC	ENSG00000236384.7	novel	2033	6	NA	NA	-524	59	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	48.2861838992849	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATAGATGTATTTCATGT	NA	False	NA	-11	True	AATAAA	-21	NA	41714579	41711460	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_41712141_41712815_41713001_41714019_41714133_41714233
H1_mix_00058041	chr21	-	1595	4	NNC	ENSG00000236384.7	novel	2033	6	NA	NA	-421	57	intron_retention	FALSE	canonical	3	18	junction_1	47.7516724547133	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCATAGATGTATTTCAT	NA	False	NA	-13	True	AATAAA	-19	NA	41714476	41711462	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_41712048_41712815_41713001_41713550_41714133_41714233
H1_mix_00058043	chr21	-	3835	8	FSM	ENSG00000183421.12	ENST00000332512.8	3831	8	0	-4	0	0	multi-exon	FALSE	canonical	3	32	junction_6	9.52333332142798	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAGACTGCTTTTTCTTA	-2	True	NA	-2	True	AATAAA	-31	NA	41767052	41739368	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_41741998_41743881_41744141_41745758_41745863_41746612_41746772_41749153_41749204_41751096_41751246_41756524_41756817_41766859
H1_mix_00058044	chr21	-	6524	24	FSM	ENSG00000141956.14	ENST00000398548.6	6525	24	1	0	1	0	multi-exon	TRUE	canonical	3	18	junction_20	6.2375774464736	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGGCCTTCTGCTCCCG	-19	True	NA	-8	True	AATAAA	-25	NA	41879343	41798224	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_41801723_41802711_41802922_41804533_41804615_41810153_41810330_41810752_41810837_41815704_41815837_41819581_41819702_41820094_41820175_41821066_41821231_41821902_41822038_41823317_41823450_41825959_41826055_41828165_41828334_41835436_41835525_41836112_41836208_41836467_41836650_41837933_41838064_41839622_41839854_41847089_41847192_41854565_41854819_41857175_41857330_41859591_41859686_41860326_41860373_41879269
H1_mix_00058045	chr21	-	6710	25	FSM	ENSG00000141956.14	ENST00000422911.6	6714	25	0	4	0	-4	multi-exon	FALSE	canonical	1	2	junction_14	9.08973398339516	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAATTGCTGGCCTTCTGCT	NA	False	NA	-12	True	AATAAA	-21	NA	41879473	41798228	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_41801723_41802711_41802922_41804533_41804615_41810153_41810330_41810752_41810837_41815704_41815837_41819581_41819702_41820094_41820175_41821066_41821231_41821902_41822038_41823317_41823450_41825959_41826055_41828165_41828334_41834504_41834565_41835436_41835525_41836112_41836208_41836467_41836650_41837933_41838064_41839622_41839854_41847089_41847192_41854565_41854819_41857175_41857330_41859591_41859686_41860326_41860373_41879269
H1_mix_00058046	chr21	-	703	6	FSM	ENSG00000141956.14	ENST00000495217.1	703	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	2.33238075793812	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCGAAGGGAAGCACGGG	NA	False	NA	NA	False	NA	NA	NA	41819783	41802893	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_41802922_41804533_41804615_41810153_41810330_41810752_41810837_41815704_41815837_41819581
H1_mix_00058047	chr21	-	6473	14	FSM	ENSG00000157617.17	ENST00000380486.4	6473	14	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	9.67581013533998	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGAGTTGTTTTTCCCGA	-6	True	NA	-6	True	AATAAA	-19	NA	41954018	41885111	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_41889345_41899052_41899363_41901621_41901750_41905723_41905838_41906991_41907167_41907659_41907785_41909458_41909524_41912331_41912441_41914597_41914722_41918104_41918228_41918855_41918961_41921971_41922086_41942146_41942246_41953369
H1_mix_00058048	chr21	-	761	6	FSM	ENSG00000157617.17	ENST00000490479.1	761	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	10.373041983912	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTAAAGGCAGCTCTTAG	NA	False	NA	NA	False	NA	NA	NA	41942160	41912159	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_41912441_41914597_41914722_41918104_41918228_41918855_41918961_41921971_41922086_41942146
H1_mix_00058049	chr21	-	6766	3	NIC	ENSG00000173276.14	novel	6846	4	NA	NA	7	-8	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	10.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTCGAGTCAGTCTCAAT	3	True	NA	-17	True	AATAAA	-15	NA	42010350	41986838	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_41991890_41992492_41994109_42010251
H1_mix_00058050	chr21	-	6844	4	FSM	ENSG00000173276.14	ENST00000398505.7	6846	4	0	2	0	-2	multi-exon	FALSE	canonical	3	7	junction_3	4.18993502999218	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCAGTCTCAATGGTATG	-4	True	NA	-11	True	AATAAA	-21	NA	42010357	41986832	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_41991890_41992492_41994109_42002896_42002962_42010251
H1_mix_00058051	chr21	-	7452	3	FSM	ENSG00000173276.14	ENST00000310826.10	7452	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	1.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTCTCAATGGTATGCC	-7	True	NA	-9	True	AATAAA	-23	NA	42010360	41986830	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_41994109_42002896_42002962_42010251
H1_mix_00058052	chr21	-	5608	2	FSM	ENSG00000173276.14	ENST00000398511.3	5608	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATAATGCCGTTCTGGTT	NA	False	NA	-5	True	AATAAA	-18	NA	42010387	41988636	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_41994109_42010251
H1_mix_00058053	chr21	-	395	2	FSM	ENSG00000160180.17	ENST00000489676.1	419	2	11	13	11	-13	multi-exon	FALSE	canonical	3	11	junction_1	0	274	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCGTGCCTGAGACTTTC	4	True	NA	-18	True	AATAAA	-27	NA	42313675	42312065	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_42312270_42313484
H1_mix_00058054	chr21	-	492	3	FSM	ENSG00000160182.3	ENST00000291527.3	492	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0.5	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGCTGTTCATTCTTTT	-2	True	NA	-1	True	ATTAAA	-16	NA	42366535	42362281	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_42362496_42363254_42363408_42366410
H1_mix_00058055	chr21	-	430	3	FSM	ENSG00000283051.1	ENST00000635001.1	513	3	83	0	83	0	multi-exon	FALSE	canonical	1	1	junction_2	2	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGTGGAAAACAGCAT	NA	False	NA	NA	False	AATAAA	-14	NA	42779911	42777818	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_42777998_42778096_42778318_42779881
H1_mix_00058056	chr21	-	759	2	Intergenic	novelGene_837	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	51	junction_1	0	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACCAGTGTGAAAGTTGT	18	False	NA	NA	False	ATTAAA	-21	NA	42806225	42797375	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr21_-_42797895_42805985
H1_mix_00058057	chr21	-	1471	12	FSM	ENSG00000160193.12	ENST00000330317.6	1471	12	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	42.7274661504326	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGTGAGATTTACATTAT	13	True	NA	-28	True	AGTAAA	-15	NA	42879531	42843093	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_42843282_42850040_42850243_42852254_42852325_42853568_42853753_42854561_42854627_42855681_42855781_42859661_42859723_42862281_42862395_42863439_42863597_42873550_42873692_42876701_42876768_42879406
H1_mix_00058058	chr21	-	2106	11	FSM	ENSG00000160193.12	ENST00000398208.3	2106	11	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_8	37.9204430353866	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGCCTGCGCTGTGTG	5	True	NA	-2	True	AATATA	-14	NA	42879539	42849225	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_42850243_42852254_42852325_42853568_42853753_42854561_42854627_42855681_42855781_42859661_42859723_42862281_42862395_42863439_42863597_42873550_42873692_42876701_42876768_42879406
H1_mix_00058059	chr21	-	1811	9	NIC	ENSG00000160193.12	novel	2106	11	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	3	45	junction_6	85.1186671653169	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGGTGCCTGCGCTGTGT	63	False	NA	-3	True	AATATA	-13	NA	42879515	42849226	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_42850243_42852254_42852325_42853568_42853753_42854561_42854627_42855681_42855781_42859661_42859723_42873550_42873692_42876701_42876768_42879406
H1_mix_00058062	chr21	-	2800	2	FSM	ENSG00000233056.4	ENST00000447535.2	2774	2	-16	-10	-16	10	multi-exon	FALSE	canonical	3	143	junction_1	0	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTCTGTTGGCGCGCTC	170	False	NA	1	True	ATTAAA	-27	NA	42925646	42916792	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_42919292_42925345
H1_mix_00058063	chr21	-	779	2	Antisense	novelGene_ENSG00000160199.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	28	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGAAGCAGCAGAGGCTG	NA	False	NA	NA	False	NA	NA	NA	42979252	42977537	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr21_-_42977630_42978565
H1_mix_00058064	chr21	-	2520	18	NNC	ENSG00000160200.18	novel	2495	17	NA	NA	0	4118	intron_retention	FALSE	non_canonical	0	0	junction_1	640.871692268864	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGGAAGAAAAGGAGGGA	-5	True	NA	NA	False	AAAAAG	-4	NA	43075831	43049072	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_43049103_43053191_43053984_43056802_43056888_43058144_43058254_43058833_43058969_43059225_43059304_43060440_43060547_43062310_43062396_43062952_43063079_43063899_43063992_43065202_43065273_43065386_43065522_43065615_43065696_43066242_43066378_43068508_43068616_43071984_43072202_43073265_43073342_43075769
H1_mix_00058065	chr21	-	2521	18	NNC	ENSG00000160200.18	novel	2495	17	NA	NA	0	4118	intron_retention	FALSE	non_canonical	0	0	junction_1	640.871692268864	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGGAAGAAAAGGAGGGA	-5	True	NA	NA	False	AAAAAG	-4	NA	43075831	43049072	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_43049103_43053190_43053984_43056802_43056888_43058144_43058254_43058833_43058969_43059225_43059304_43060440_43060547_43062310_43062396_43062952_43063079_43063899_43063992_43065202_43065273_43065386_43065522_43065615_43065696_43066242_43066378_43068508_43068616_43071984_43072202_43073265_43073342_43075769
H1_mix_00058066	chr21	-	4220	14	FSM	ENSG00000160200.18	ENST00000461686.5	2656	14	0	-1564	0	1564	multi-exon	FALSE	canonical	3	62	junction_13	693.839246085348	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGAGCCACTGCGCCTCG	8526	False	NA	NA	False	NA	NA	NA	43068404	43051626	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_43053984_43056802_43056888_43058144_43058254_43058833_43058969_43059225_43059304_43060440_43060547_43062310_43062396_43062952_43063079_43063899_43063992_43065202_43065273_43065386_43065522_43065615_43065696_43066242_43066378_43067777
H1_mix_00058067	chr21	-	2264	18	NIC	ENSG00000160200.18	novel	2353	18	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	803	junction_1	485.433676902706	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	8	True	NA	NA	False	TATAAA	-14	NA	43075818	43053190	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_43053648_43053861_43053984_43056802_43056888_43058144_43058254_43058833_43058969_43059225_43059304_43060440_43060547_43062310_43062396_43062952_43063079_43063899_43063992_43065202_43065273_43065386_43065522_43065615_43065696_43066242_43066378_43068508_43068616_43071984_43072202_43073265_43073342_43075769
H1_mix_00058068	chr21	-	4017	17	FSM	ENSG00000160200.18	ENST00000398158.5	2453	17	0	-1564	0	1564	multi-exon	FALSE	canonical	3	171	junction_16	624.83389980358	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGAGCCACTGCGCCTCG	-5	True	NA	NA	False	NA	NA	NA	43075831	43051626	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_43053984_43056802_43056888_43058144_43058254_43058833_43058969_43059225_43059304_43060440_43060547_43062310_43062396_43062952_43063079_43063899_43063992_43065202_43065273_43065386_43065522_43065615_43065696_43066242_43066378_43068508_43068616_43071984_43072202_43073265_43073304_43075769
H1_mix_00058069	chr21	-	4059	17	FSM	ENSG00000160200.18	ENST00000398165.8	2495	17	0	-1564	0	1564	multi-exon	FALSE	canonical	3	1604	junction_10	325.332137975946	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGAGCCACTGCGCCTCG	-9	True	NA	NA	False	NA	NA	NA	43075835	43051626	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_43053984_43056802_43056888_43058144_43058254_43058833_43058969_43059225_43059304_43060440_43060547_43062310_43062396_43062952_43063079_43063899_43063992_43065202_43065273_43065386_43065522_43065615_43065696_43066242_43066378_43068508_43068616_43071984_43072202_43073265_43073342_43075769
H1_mix_00058070	chr21	-	4147	17	FSM	ENSG00000160200.18	ENST00000352178.9	2583	17	0	-1564	0	1564	multi-exon	FALSE	canonical	3	44	junction_16	651.326866864864	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGAGCCACTGCGCCTCG	-2	True	NA	NA	False	NA	NA	NA	43076378	43051626	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_43053984_43056802_43056888_43058144_43058254_43058833_43058969_43059225_43059304_43060440_43060547_43062310_43062396_43062952_43063079_43063899_43063992_43065202_43065273_43065386_43065522_43065615_43065696_43066242_43066378_43068508_43068616_43071984_43072202_43073265_43073342_43076224
H1_mix_00058072	chr21	-	1515	6	FSM	ENSG00000160200.18	ENST00000491776.1	1515	6	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	962.445343902707	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACCATCACAACAGCCCT	5142	False	NA	NA	False	ATTAAA	-2	NA	43060520	43055071	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_43056100_43056802_43056888_43058144_43058254_43058833_43058969_43059225_43059304_43060440
H1_mix_00058075	chr21	-	683	4	FSM	ENSG00000160200.18	ENST00000465732.5	683	4	0	0	0	0	multi-exon	FALSE	canonical	3	2240	junction_3	253.415776058941	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGGTGACCAAAGTGACT	9	True	NA	NA	False	AAAACA	-20	NA	43075864	43068320	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_43068616_43071984_43072202_43073265_43073342_43075769
H1_mix_00058077	chr21	-	4710	7	FSM	ENSG00000160201.12	ENST00000475639.5	4694	7	0	-16	0	16	multi-exon	FALSE	canonical	3	4554	junction_5	679.297369836412	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTGGAAGTTCTTTA	20	True	NA	NA	False	AATAAA	-36	NA	43107524	43092939	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_43093250_43094470_43094564_43094654_43094789_43095437_43095537_43095693_43095744_43100452_43104403_43107450
H1_mix_00058078	chr21	-	956	8	FSM	ENSG00000160201.12	ENST00000380276.6	940	8	0	-16	0	16	multi-exon	FALSE	canonical	3	2282	junction_5	1691.04056843165	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTGGAAGTTCTTTA	-21	True	NA	NA	False	AATAAA	-36	NA	43107565	43092939	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_43093250_43094470_43094564_43094654_43094789_43095437_43095537_43095693_43095744_43101365_43101433_43104314_43104403_43107450
H1_mix_00058079	chr21	-	960	8	FSM	ENSG00000160201.12	ENST00000291552.9	945	8	0	-15	0	15	multi-exon	FALSE	canonical	3	4090	junction_6	882.814469611312	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTGTGGAAGTTCTTT	24	False	43107594	NA	False	AATAAA	-35	NA	43107570	43092940	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_43093250_43094470_43094564_43094654_43094789_43095437_43095537_43095693_43095744_43100452_43100520_43104314_43104403_43107450
H1_mix_00058080	chr21	-	338	4	FSM	ENSG00000160201.12	ENST00000463599.5	338	4	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_2	1715.63347549009	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGAGGTGAGAGAACTG	3118	False	NA	NA	False	NA	NA	NA	43104476	43095701	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_43095744_43100452_43100520_43101365_43101433_43104314
H1_mix_00058081	chr21	-	3973	3	FSM	ENSG00000160201.12	ENST00000496462.1	3973	3	0	0	0	0	multi-exon	FALSE	canonical	3	2622	junction_1	1717	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAAAAGAGTTTTGAGCA	20	True	NA	NA	False	NA	NA	NA	43107524	43097621	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_43101433_43104314_43104403_43107450
H1_mix_00058082	chr21	-	4731	14	FSM	ENSG00000142178.9	ENST00000270162.8	4747	14	-16	32	-16	-32	multi-exon	FALSE	canonical	2	7	junction_1	3.33175505041657	205	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGACTTTTTCCCTTCCT	NA	False	NA	NA	False	AATAAA	-19	NA	43427147	43414514	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_43417118_43417542_43417775_43418259_43418542_43419020_43419238_43419352_43419479_43419858_43420006_43420233_43420458_43421009_43421134_43421242_43421368_43421637_43421800_43421973_43422038_43425406_43425524_43426022_43426193_43427009
H1_mix_00058083	chr21	-	1895	9	FSM	ENSG00000160207.9	ENST00000291560.7	1900	9	2	3	2	-3	multi-exon	FALSE	canonical	2	4	junction_7	2.39791576165636	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACCCTTGCTGTCTAAAAT	3	True	NA	NA	False	AATAAA	-23	NA	43659486	43529188	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_43529963_43592224_43592329_43613829_43613948_43630321_43630455_43633271_43633422_43644288_43644393_43656586_43656738_43658060_43658321_43659385
H1_mix_00058086	chr21	-	588	3	FSM	ENSG00000160213.9	ENST00000291568.7	588	3	0	0	0	0	multi-exon	FALSE	canonical	3	1575	junction_2	2	350	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGATTGCCTCCTTTGTTTT	14	True	NA	-9	True	AATAGA	-20	NA	43776308	43773949	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_43774331_43774657_43774760_43776203
H1_mix_00058089	chr21	-	2221	7	FSM	ENSG00000160226.16	ENST00000339818.9	2221	7	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_2	22.5813344748858	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGTCGTTTTAAATTGAG	1	True	NA	-1	True	AGTAAA	-19	NA	44339390	44328943	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_44330327_44330822_44330920_44331842_44332015_44333032_44333263_44335757_44335805_44337648_44337668_44339117
H1_mix_00058090	chr21	-	2180	6	NIC	ENSG00000160226.16	novel	1283	7	NA	NA	15	-4	intron_retention	FALSE	canonical	0	0	junction_5	63.4255469034363	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTGAGGTCGTTTTAAAT	16	True	NA	-5	True	AGTAAA	-15	NA	44339375	44328947	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_44330327_44330822_44330917_44331842_44332015_44333032_44333263_44335757_44335805_44339117
H1_mix_00058091	chr21	-	1846	6	NIC	ENSG00000160226.16	novel	2221	7	NA	NA	0	-356	intron_retention	FALSE	canonical	0	0	junction_5	59.7896312080949	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGATCCAGATCTCCATG	1	True	NA	NA	False	NA	NA	NA	44339390	44329299	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_44330327_44330822_44330920_44331842_44332015_44333032_44333263_44335757_44335805_44339117
H1_mix_00058092	chr21	-	485	2	FSM	ENSG00000160226.16	ENST00000478674.1	485	2	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGCCCCAGAGAGAGAGGG	8125	False	NA	NA	False	NA	NA	NA	44333464	44331961	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_44332015_44333032
H1_mix_00058096	chr21	-	3313	6	FSM	ENSG00000184787.19	ENST00000345496.7	3367	6	0	54	0	-54	multi-exon	FALSE	canonical	3	483	junction_2	50.9996078416295	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCGTCTTGTTACTTAGC	2	True	NA	-53	True	NA	NA	NA	44801820	44768633	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_44771490_44773546_44773688_44777298_44777418_44787919_44787966_44788059_44788096_44801705
H1_mix_00058097	chr21	-	4340	2	FSM	ENSG00000184787.19	ENST00000481546.1	4340	2	0	0	0	0	multi-exon	FALSE	canonical	3	591	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTCCCTTTGTCGTA	1909	False	NA	-2	True	AATAAA	-25	NA	44775436	44769039	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_44771490_44773546
H1_mix_00058098	chr21	-	737	7	FSM	ENSG00000184787.19	ENST00000330942.9	721	7	0	-16	0	0	multi-exon	FALSE	canonical	3	20	junction_6	258.687982369151	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAGACTTGCAAGAACCAT	4	True	NA	-46	True	NA	NA	NA	44801774	44771278	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_44771490_44773546_44773688_44777298_44777418_44787919_44787966_44788059_44788096_44801283_44801399_44801705
H1_mix_00058100	chr21	-	1504	2	FSM	ENSG00000184787.19	ENST00000490091.1	1512	2	0	8	0	-8	multi-exon	FALSE	canonical	3	20	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCACTGACTGGCTGTT	-8	True	NA	NA	False	AATAAA	-10	NA	44801808	44799997	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_44801399_44801705
H1_mix_00058101	chr21	-	1741	4	FSM	ENSG00000184900.16	ENST00000332859.11	1740	4	0	-1	0	1	multi-exon	FALSE	canonical	3	1199	junction_3	64.3238334954903	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCTTCTACTAAACACT	8	True	NA	-37	True	AGTAAA	-21	NA	44818062	44805615	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_44807041_44809046_44809119_44813975_44814105_44817947
H1_mix_00058102	chr21	-	753	2	FSM	ENSG00000184900.16	ENST00000466861.1	753	2	0	0	0	0	multi-exon	FALSE	canonical	3	1199	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGCAAGAAAGCGCGTGAT	35	False	NA	NA	False	NA	NA	NA	44818105	44813509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_44814105_44817947
H1_mix_00058104	chr21	-	580	4	FSM	ENSG00000183255.12	ENST00000474737.5	580	4	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	489.225464950012	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCAGAAAAAAATATGGT	9672	False	NA	1	True	NA	NA	NA	44865896	44855227	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_44855257_44856192_44856365_44865394_44865448_44865570
H1_mix_00058109	chr21	-	4825	8	FSM	ENSG00000186866.17	ENST00000331343.11	4825	8	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_5	27.656050745852	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGGAGTGTAGACTCAT	-9	True	NA	-6	True	AATAAA	-21	NA	45287898	45263927	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_45267714_45269838_45270020_45277016_45277143_45278102_45278170_45282348_45282460_45283382_45283528_45285677_45285929_45287740
H1_mix_00058110	chr21	-	2868	9	FSM	ENSG00000186866.17	ENST00000349485.10	2861	9	0	-7	0	0	multi-exon	FALSE	canonical	3	137	junction_1	28.6179030503634	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGGAGTGTAGACTCAT	-6	True	NA	-6	True	AATAAA	-21	NA	45287895	45263927	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_45265636_45267589_45267714_45269838_45270020_45277016_45277143_45278102_45278170_45282348_45282460_45283382_45283528_45285677_45285929_45287740
H1_mix_00058116	chr21	-	562	1	FSM	ENSG00000273796.1	ENST00000617004.1	561	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGAGTAGAAGTGGTCAT	1981	False	NA	-10	True	AATAAA	-18	NA	45404369	45403807	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_45403800_45404400
H1_mix_00058119	chr21	-	1868	6	FSM	ENSG00000173638.19	ENST00000380010.8	1884	6	20	-4	-11	4	multi-exon	FALSE	canonical	0	0	junction_4	90.8748590095192	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGGGCTTCTGATTCAGG	-17	True	NA	-2	True	ATTAAA	-19	NA	45542451	45514710	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_45515153_45525816_45525959_45530769_45530972_45531388_45532149_45537770_45538009_45542367
H1_mix_00058121	chr21	-	2143	3	FSM	ENSG00000160285.15	ENST00000491729.1	2143	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	260.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGAATTCAGATTATTT	5341	False	NA	-1	True	ATTAAA	-17	NA	46193487	46188445	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_46188822_46191075_46191236_46191880
H1_mix_00058122	chr21	-	2626	23	NIC	ENSG00000160285.15	novel	2995	23	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	18	junction_1	131.845012943291	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGAATTCAGATTATTT	18	True	NA	-1	True	ATTAAA	-17	NA	46228768	46188445	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_46188822_46191075_46191236_46191880_46191960_46194490_46194662_46195675_46195757_46196201_46196268_46205835_46205942_46206671_46206769_46207427_46207578_46208250_46208302_46209553_46209626_46210687_46210745_46213024_46213053_46213737_46213836_46215179_46215299_46215684_46215794_46216388_46216525_46219475_46219573_46221853_46221976_46222629_46222739_46227551_46227691_46228433_46228600_46228731
H1_mix_00058124	chr21	-	3602	2	FSM	ENSG00000160285.15	ENST00000474319.1	3601	2	0	-1	0	0	multi-exon	FALSE	canonical	3	539	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCACACTGTGTTTCGT	5458	False	NA	-6	True	AATAAA	-26	NA	46193370	46189123	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_46191236_46191880
H1_mix_00058125	chr21	-	4978	21	FSM	ENSG00000160285.15	ENST00000457828.6	4390	21	62	-650	0	0	multi-exon	FALSE	canonical	3	468	junction_5	49.2327127020236	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGTGATTAAAAATCAGTC	24	True	NA	-29	True	NA	NA	NA	46228762	46188473	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_46191236_46191880_46191960_46194490_46194662_46195675_46195757_46196201_46196268_46205835_46205942_46206671_46206769_46207427_46207578_46208250_46208302_46209553_46209626_46210687_46210745_46213024_46213053_46213737_46213836_46215179_46215299_46215684_46215794_46216388_46216525_46219475_46219573_46221853_46221976_46222629_46222739_46227551_46227691_46228433
H1_mix_00058128	chr21	-	4075	18	FSM	ENSG00000160294.11	ENST00000496607.5	4075	18	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_15	40.5705843973081	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCCCAGTTTTTCATAAT	NA	False	NA	-11	True	GATAAA	-15	NA	46266952	46235132	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_46235427_46236828_46236980_46240810_46241018_46242801_46242932_46243464_46243723_46244806_46245198_46246306_46246405_46246627_46246887_46251528_46251683_46254391_46254527_46254775_46254845_46256788_46256987_46258938_46259092_46260792_46260907_46261279_46261412_46264116_46264218_46265320_46265524_46265924
H1_mix_00058129	chr21	-	6403	28	FSM	ENSG00000160294.11	ENST00000291688.6	6403	28	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_19	48.6379361611819	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCCCAGTTTTTCATAAT	-1	True	NA	-11	True	GATAAA	-15	NA	46285611	46235132	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_46235427_46236828_46236980_46240810_46241018_46242801_46242932_46243464_46243723_46244806_46245198_46246306_46246405_46246627_46246887_46251528_46251683_46254391_46254527_46254775_46254845_46256788_46256987_46258938_46259092_46260792_46260907_46261279_46261412_46264116_46264218_46265320_46265524_46265924_46266167_46266981_46267143_46270400_46270564_46272560_46272830_46273387_46273586_46275185_46275326_46277526_46277718_46279992_46280138_46280496_46280576_46283614_46283839_46284067
H1_mix_00058130	chr21	-	6852	29	NIC	ENSG00000160294.11	novel	6333	29	NA	NA	-171	0	combination_of_known_junctions	FALSE	canonical	3	105	junction_28	54.8571893600993	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCCCAGTTTTTCATAAT	142	False	NA	-11	True	GATAAA	-15	NA	46286468	46235132	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_46235427_46236828_46236980_46240810_46241018_46242801_46242932_46243464_46243723_46244806_46245198_46246306_46246405_46246627_46246887_46251528_46251683_46254391_46254527_46254775_46254845_46256788_46256987_46258938_46259092_46260792_46260907_46261279_46261412_46264116_46264218_46265320_46265524_46265924_46266167_46266981_46267143_46270400_46270564_46272560_46272830_46273387_46273586_46275185_46275326_46277526_46277718_46279992_46280138_46280496_46280576_46283614_46283839_46284067_46285395_46285802
H1_mix_00058131	chr21	-	6672	29	NIC	ENSG00000160294.11	novel	6333	29	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_28	56.3770560510177	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCCCAGTTTTTCATAAT	426	False	NA	-11	True	GATAAA	-15	NA	46286184	46235132	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_46235427_46236828_46236980_46240810_46241018_46242801_46242932_46243464_46243723_46244806_46245198_46246306_46246405_46246627_46246887_46251528_46251683_46254391_46254527_46254775_46254845_46256788_46256987_46258938_46259092_46260792_46260907_46261279_46261412_46264116_46264218_46265320_46265524_46265924_46266167_46266981_46267143_46270400_46270564_46272560_46272830_46273387_46273586_46275185_46275326_46277526_46277718_46279992_46280138_46280496_46280576_46283614_46283839_46284067_46285395_46285698
H1_mix_00058137	chr21	-	2941	9	FSM	ENSG00000160298.18	ENST00000397682.7	2941	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_8	25.9996995174944	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTATGACGTGATCCC	-34	True	NA	-6	True	AATAAA	-22	NA	46323875	46301129	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_46301714_46301996_46302155_46302484_46302577_46311455_46311568_46314715_46315050_46315473_46315548_46317207_46317349_46318011_46318221_46322638
H1_mix_00058138	chr21	-	3182	9	NIC	ENSG00000160298.18	novel	2941	9	NA	NA	27	-1	intron_retention	FALSE	canonical	3	21	junction_6	20.5665839409465	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAGCTGTGTATGACGTG	11	True	NA	-11	True	AATAAA	-17	NA	46323830	46301134	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_46302155_46302484_46302577_46311455_46311568_46314715_46314881_46315473_46315548_46317207_46317349_46318011_46318221_46318784_46318962_46322638
H1_mix_00058139	chr21	-	3415	7	ISM	ENSG00000160298.18	ENST00000417060.5	1072	8	-1706	634	-775	-11	5prime_fragment	FALSE	canonical	3	34	junction_6	18.0554700852678	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTGAAAGAAGCAAGCTGT	4556	False	NA	-21	True	AATAAA	-7	NA	46319912	46301144	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr21_-_46302155_46302484_46302577_46311455_46311568_46314715_46314881_46315473_46315548_46317207_46317269_46318011
H1_mix_00058140	chr21	-	4627	8	NNC	ENSG00000160298.18	novel	2624	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	13	junction_7	25.4093024906475	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGCTGTGTATGACGTGA	-28	True	NA	-10	True	AATAAA	-18	NA	46323869	46301133	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_46302155_46302484_46302577_46311455_46311568_46314715_46315050_46315473_46315548_46317207_46317269_46318011_46318221_46321145
H1_mix_00058142	chr21	+	4166	1	Intergenic	novelGene_809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTTTTTTTGAAAAGATCA	NA	False	NA	NA	False	AAAAAG	-30	NA	6641449	6645615	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr21_+_6641400_6645600
H1_mix_00058143	chr21	+	5334	1	Intergenic	novelGene_811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGGGCCCGGCGGGGCGTG	1065	False	NA	NA	False	NA	NA	NA	8213632	8218966	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr21_+_8213600_8219000
H1_mix_00058145	chr21	+	2006	1	Intergenic	novelGene_814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGGGGTTCTCGGGGGG	-6	True	NA	NA	False	GGGGCT	-2	NA	8250196	8252202	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr21_+_8250200_8252200
H1_mix_00058146	chr21	+	402	1	Intergenic	novelGene_817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAAAAGATTACCCACTCC	6	True	NA	NA	False	NA	NA	NA	8253915	8254317	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr21_+_8253900_8254300
H1_mix_00058147	chr21	+	2790	1	Intergenic	novelGene_818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	NNNNNNNNNNNNNNNNNNNN	76	False	NA	NA	False	NA	NA	NA	8258181	8260971	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr21_+_8258200_8261000
H1_mix_00058148	chr21	+	2623	1	Intergenic	novelGene_821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCGTGCGTCCCCTTTCCC	-8	True	NA	NA	False	NA	NA	NA	8389034	8391657	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr21_+_8389000_8391700
H1_mix_00058149	chr21	+	1048	1	Intergenic	novelGene_822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGTGGGGGGACCGGGC	1	True	NA	NA	False	NA	NA	NA	8396923	8397971	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr21_+_8396900_8398000
H1_mix_00058150	chr21	+	378	1	Intergenic	novelGene_833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTACGATGTAATCCATCAA	NA	False	NA	NA	False	AAAAAG	-2	NA	27913649	27914027	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr21_+_27913600_27914000
H1_mix_00058151	chr21	+	208	1	Intergenic	novelGene_834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGGCGGAGCTTGCAGTG	NA	False	NA	NA	False	NA	NA	NA	29099799	29100007	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr21_+_29099800_29100000
H1_mix_00058152	chr21	+	2190	1	Intergenic	novelGene_836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGAAGGGGGTAGATTTT	NA	False	NA	NA	False	NA	NA	NA	40575463	40577653	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr21_+_40575500_40577700
H1_mix_00058153	chr21	+	3203	7	FSM	ENSG00000277117.5	ENST00000623960.4	3237	7	3	31	1	-31	multi-exon	FALSE	canonical	2	4	junction_3	4.6785562825394	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAACCTGACTTAAGAGAG	7	True	NA	NA	False	NA	NA	NA	5022533	5036740	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_5022694_5025008_5025050_5026279_5026631_5027934_5028226_5032052_5032218_5033407_5033444_5034581
H1_mix_00058157	chr21	+	729	1	FSM	ENSG00000280013.1	ENST00000623928.1	207	1	46	-568	46	568	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACCCTTGCTGTCTAAAAT	NA	False	NA	NA	False	AATAAA	-23	NA	6008649	6009378	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_6008600_6009400
H1_mix_00058158	chr21	+	4720	14	FSM	ENSG00000275993.3	ENST00000613488.3	4747	14	-10	37	-10	-37	multi-exon	FALSE	canonical	2	7	junction_13	3.51833742339362	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACCTTGACTTTTTCCC	NA	False	NA	NA	False	AATAAA	-14	NA	6111120	6123741	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_6111253_6112069_6112240_6112738_6112856_6116223_6116288_6116461_6116624_6116893_6117019_6117127_6117252_6117803_6118028_6118255_6118403_6118782_6118909_6119023_6119241_6119719_6120002_6120486_6120719_6121143
H1_mix_00058159	chr21	+	786	4	FSM	ENSG00000278903.4	ENST00000692898.1	792	4	2	4	2	-2	multi-exon	FALSE	canonical	3	22	junction_3	21.4527905462721	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTTGTTGCCTCATGCA	-32	True	NA	NA	False	AATAAA	-15	NA	6318423	6329951	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_6318605_6320871_6320975_6322599_6322698_6329547
H1_mix_00058160	chr21	+	3215	4	ISM	ENSG00000278903.4	ENST00000689354.1	935	5	14	3167	0	-3165	5prime_fragment	FALSE	canonical	3	25	junction_3	16.3571255285137	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGGGACAAAGCCAACTC	39	False	NA	NA	False	NA	NA	NA	6318494	6326788	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr21_+_6318605_6320882_6320975_6322599_6322698_6323873
H1_mix_00058161	chr21	+	593	3	FSM	ENSG00000276077.4	ENST00000624791.1	572	3	-21	0	5	0	multi-exon	FALSE	canonical	0	0	junction_2	4.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTCCAAACCTGGACCTT	NA	False	NA	NA	False	NA	NA	NA	7430673	7467278	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_7430839_7461813_7461986_7467022
H1_mix_00058162	chr21	+	2245	4	FSM	ENSG00000276077.4	ENST00000625096.3	2247	4	2	0	2	0	multi-exon	FALSE	canonical	3	25	junction_1	90.4814284198083	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCTTTGTTTCTACAT	NA	False	NA	NA	False	AATAAA	-22	NA	7430670	7468875	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_7430839_7443124_7443184_7462826_7462992_7467022
H1_mix_00058163	chr21	+	2153	2	NIC	ENSG00000276077.4	novel	994	3	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTGTCTCAAATTACTTT	NA	False	NA	NA	False	AATAAA	-15	NA	7430670	7469007	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_+_7430839_7467022
H1_mix_00058164	chr21	+	1212	5	FSM	ENSG00000273590.5	ENST00000622934.3	1193	5	-24	5	-4	-5	multi-exon	FALSE	canonical	3	9	junction_3	99.6857562543416	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCAAATGTATCTTGTTT	NA	False	NA	NA	False	AATAAA	-17	NA	7744946	7772241	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_7745039_7748898_7748988_7754951_7755119_7769186_7769376_7771566
H1_mix_00058166	chr21	+	3238	1	FSM	ENSG00000275708.1	ENST00000615959.1	180	1	-2485	-573	-2485	573	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCCGCGGGGCGGCGGAGC	-8	True	NA	NA	False	NA	NA	NA	8205987	8209225	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_8206000_8209200
H1_mix_00058167	chr21	+	661	1	FSM	ENSG00000278233.1	ENST00000612463.1	153	1	0	-508	0	508	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGAGAGAGGGTCGGGGG	4	False	NA	NA	False	NA	NA	NA	8212571	8213232	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_8212600_8213200
H1_mix_00058168	chr21	+	1002	2	ISM	ENSG00000278996.1	ENST00000623664.1	2498	7	24960	3938	24960	-3938	internal_fragment	FALSE	canonical	3	118	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAGCACGGTGTGAACGT	2594	False	NA	NA	False	AATAAA	-10	NA	8222579	8223708	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr21_+_8223058_8223184
H1_mix_00058169	chr21	+	2373	1	FSM	ENSG00000286012.1	ENST00000651349.1	312	1	-1437	-624	-1437	624	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAATCTGAGGCGCGATTG	2685	False	NA	NA	False	ATTAAA	-4	NA	8239298	8241671	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_8239300_8241700
H1_mix_00058170	chr21	+	2942	3	Intergenic	novelGene_823	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	329.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGTTGGCCGCGCGGGCCC	827	False	NA	NA	False	NA	NA	NA	8398016	8446517	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr21_+_8398140_8442368_8443329_8444658
H1_mix_00058171	chr21	+	4146	2	Intergenic	novelGene_827	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGTTGGCCGCGCGGGCCC	950	False	NA	NA	False	NA	NA	NA	8398139	8446517	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr21_+_8399068_8443299
H1_mix_00058172	chr21	+	2879	3	Intergenic	novelGene_828	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	329.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGCTCCTCCGCACGGGTC	950	False	NA	NA	False	NA	NA	NA	8398139	8446583	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr21_+_8399068_8443302_8443329_8444658
H1_mix_00058174	chr21	+	530	1	FSM	ENSG00000278189.1	ENST00000619471.1	153	1	1	-378	1	378	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCCGGCCGGGTGGAAGG	5	False	NA	NA	False	GGGGCT	-39	NA	8439823	8440353	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_8439800_8440400
H1_mix_00058175	chr21	+	1791	1	Intergenic	novelGene_832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCCCCGTAGTGATAAAAC	1579	False	NA	NA	False	NA	NA	NA	8447262	8449053	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr21_+_8447300_8449100
H1_mix_00058176	chr21	+	210	1	FSM	ENSG00000286032.1	ENST00000651130.1	333	1	90	33	90	-33	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACTACATATGAATAAAGA	1765	False	NA	NA	False	NA	NA	NA	8465343	8465553	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_8465300_8465600
H1_mix_00058177	chr21	+	862	1	FSM	ENSG00000264462.1	ENST00000581792.1	180	1	-394	-288	-394	288	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCCCGGGTCGGGGGGTG	NA	False	NA	NA	False	NA	NA	NA	8986604	8987466	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_8986600_8987500
H1_mix_00058178	chr21	+	784	2	FSM	ENSG00000185272.14	ENST00000475864.1	668	2	-116	0	-116	0	multi-exon	FALSE	canonical	3	27	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTGTCTTTTGAAATAT	8070	False	NA	2	True	AATAAA	-13	NA	14224258	14227384	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_14224538_14226879
H1_mix_00058179	chr21	+	2605	2	FSM	ENSG00000155313.16	ENST00000478932.1	2605	2	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTGTAAGCAGGTATA	3952	False	NA	21	True	AATAAA	-28	NA	15875995	15878911	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_15877992_15878302
H1_mix_00058190	chr21	+	217	2	FSM	ENSG00000156273.16	ENST00000548467.1	217	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCAGCGGAAGAAAGATGT	198	False	NA	NA	False	NA	NA	NA	29299682	29321355	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_29299765_29321220
H1_mix_00058204	chr21	+	2288	8	FSM	ENSG00000159128.15	ENST00000381995.5	1742	8	-551	5	-532	0	multi-exon	FALSE	canonical	3	8	junction_1	214.444798091657	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTATGTGAAGTGTTTTCT	-4	True	NA	21	True	AATAAA	-27	NA	33402880	33437516	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_33403617_33410835_33410893_33414887_33415021_33421479_33421686_33426883_33427033_33432176_33432337_33432713_33432872_33436827
H1_mix_00058208	chr21	+	8314	12	NIC	ENSG00000159140.21	novel	8394	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	548	junction_11	183.417781702397	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTGTTTTATTTTCTGG	2	True	NA	15	True	AATAAA	-1	NA	33543063	33577481	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_+_33543170_33546212_33546380_33549475_33555392_33557155_33557317_33559229_33559377_33559586_33559776_33567156_33567268_33568970_33569088_33573307_33573456_33575595_33575668_33575777_33575894_33576417
H1_mix_00058209	chr21	+	8394	13	FSM	ENSG00000159140.21	ENST00000455528.5	8394	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	354.801930268456	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTGTTTTATTTTCTGG	2	True	NA	15	True	AATAAA	-1	NA	33543063	33577481	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_33543170_33546212_33546380_33549475_33555392_33557155_33557317_33559229_33559377_33559586_33559776_33567156_33567268_33568970_33569088_33572550_33572631_33573307_33573456_33575595_33575668_33575777_33575894_33576417
H1_mix_00058214	chr21	+	1818	5	FSM	ENSG00000159140.21	ENST00000478183.5	1818	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	311.278813927321	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTGTTTTATTTTCTGG	NA	False	NA	15	True	AATAAA	-1	NA	33572212	33577481	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_33572631_33573307_33573456_33575595_33575668_33575777_33575894_33576417
H1_mix_00058218	chr21	+	5499	30	NNC	ENSG00000205726.15	novel	5408	29	NA	NA	72	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	113.053121688101	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGATGGAAATGTCTCTGT	49	False	NA	16	True	ATTAAA	-16	NA	33642613	33838495	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_+_33642714_33718796_33718857_33721177_33721271_33721931_33722144_33722587_33722652_33735043_33735205_33750142_33750323_33751809_33751907_33755296_33755398_33761922_33761987_33765874_33766013_33767712_33767829_33772060_33772324_33774728_33774879_33774967_33775109_33781460_33781549_33781993_33782134_33794340_33794469_33797378_33797609_33799807_33799930_33810974_33811223_33813912_33814073_33818266_33818473_33819240_33819324_33823486_33823654_33826817_33826864_33829623_33829746_33834306_33834425_33836440_33836633_33836986
H1_mix_00058225	chr21	+	1085	4	FSM	ENSG00000205670.12	ENST00000399295.2	1074	4	-11	0	-11	0	multi-exon	FALSE	canonical	2	2	junction_1	96.1330097081931	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCGTGGCCTTTGGAATAA	82	False	NA	NA	False	AATAAA	-20	NA	34375592	34389153	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_34375897_34379427_34379517_34385477_34385645_34388628
H1_mix_00058226	chr21	+	501	3	FSM	ENSG00000205670.12	ENST00000474455.1	1857	3	367	989	-122	-989	multi-exon	FALSE	canonical	2	4	junction_1	110	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTCCACAGTACCCAAC	424	False	NA	NA	False	AAAAAG	-11	NA	34375934	34385644	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_34376180_34379427_34379517_34385477
H1_mix_00058240	chr21	+	1457	5	FSM	ENSG00000182093.16	ENST00000649822.1	1437	5	-20	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	211.165071685636	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCTGCAAGTTCATATT	-15	True	NA	15	True	AGTAAA	-17	NA	39380457	39397888	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_39380487_39390697_39390920_39391768_39391837_39393165_39393281_39396865
H1_mix_00058244	chr21	+	1290	3	FSM	ENSG00000183778.19	ENST00000615480.5	1290	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	13	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGGGGCGGGACAGAGGA	-1	True	NA	NA	False	NA	NA	NA	39612939	39661561	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_39613068_39659752_39659913_39660559
H1_mix_00058255	chr21	+	956	6	NNC	ENSG00000160191.18	novel	1875	19	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	96.5724598423381	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATCACTATTTCATGTAT	149	False	NA	9	True	AATAAA	-11	NA	42653758	42701189	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_+_42653884_42686191_42686263_42687916_42687995_42697414_42697491_42698967_42699012_42700627
H1_mix_00058256	chr21	+	1963	19	FSM	ENSG00000160191.18	ENST00000398225.7	1963	19	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	71.0502560789818	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	-1	True	NA	21	True	AATATA	-15	NA	42653778	42775509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_42653884_42687916_42687995_42698967_42699012_42731769_42731950_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
H1_mix_00058260	chr21	+	1606	15	FSM	ENSG00000160191.18	ENST00000398227.7	1606	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	71.474877847152	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	-1	True	NA	21	True	AATATA	-15	NA	42653778	42775509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_42653884_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
H1_mix_00058263	chr21	+	645	5	NNC	ENSG00000160191.18	novel	794	5	NA	NA	2	-213	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_4	81.3111308493493	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATGAATTGCTTCCAAAAA	1	True	NA	NA	False	AATAAA	-14	NA	42653780	42700976	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_+_42653884_42686191_42686263_42687916_42687995_42698967_42699012_42700627
H1_mix_00058265	chr21	+	350	2	NNC	ENSG00000160194.18	novel	2029	6	NA	NA	-18	-20106	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	0	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGATATGTGGTAATGTGT	490	False	NA	9	True	AATAAA	-20	NA	42879625	42883825	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_+_42879756_42883605
H1_mix_00058270	chr21	+	473	6	FSM	ENSG00000160209.19	ENST00000472777.5	460	6	-13	0	0	0	multi-exon	TRUE	canonical	1	2	junction_5	318.83977167223	224	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAGCTGCAGCCCACAGA	17	True	NA	NA	False	AAGAAA	-41	NA	43728899	43747186	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_43729011_43734068_43734124_43741666_43741772_43743723_43743808_43746078_43746126_43747115
H1_mix_00058274	chr21	+	1510	9	FSM	ENSG00000160216.21	ENST00000479117.5	1510	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	34.1641259217911	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTTTTTAATCAGTTATC	NA	False	NA	NA	False	NA	NA	NA	43959782	43982724	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_43959860_43960631_43960780_43967945_43968116_43969117_43969280_43970652_43970807_43971387_43971491_43978045_43978122_43980988_43981188_43982303
H1_mix_00058275	chr21	+	588	3	FSM	ENSG00000160216.21	ENST00000484865.1	588	3	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCCCACTGCAGCCCCAC	NA	False	NA	NA	False	NA	NA	NA	43971402	43981412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_43971491_43978045_43978122_43980988
H1_mix_00058277	chr21	+	583	4	FSM	ENSG00000241945.8	ENST00000486126.1	583	4	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_3	65.1783876927178	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAACAACCTGACAGCTG	7184	False	NA	NA	False	AATAAA	-9	NA	44114575	44117843	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_44114769_44115263_44115400_44115690_44115921_44117819
H1_mix_00058285	chr21	+	9180	8	Fusion	ENSG00000235890.2_ENSG00000182912.6_ENSG00000228709.2	novel	2108	6	NA	NA	-44	0	intron_retention	FALSE	canonical	1	2	junction_5	10.8721700516803	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACAGCTTCTTGTCTAAT	-11	True	NA	8	True	CATAAA	-16	NA	44485441	44520830	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr21_+_44486231_44506646_44508310_44508726_44508930_44509251_44509407_44509822_44509928_44510001_44510800_44510938_44511072_44515496
H1_mix_00058286	chr21	+	912	2	FSM	ENSG00000228709.2	ENST00000449713.2	1856	2	91	853	91	-853	multi-exon	FALSE	canonical	3	24	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGGGTAGAAGAGGGTG	8	False	NA	NA	False	TTTAAA	-16	NA	44485576	44490288	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_44486231_44490030
H1_mix_00058290	chr21	+	789	5	NIC	ENSG00000160256.13	novel	892	6	NA	NA	34	0	combination_of_known_splicesites	FALSE	canonical	3	32	junction_4	111.268818633074	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTGCTTCCCTGATTCA	43	False	NA	-11	True	AATAAA	-42	NA	44940062	44976973	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_+_44940187_44943683_44943838_44960099_44960169_44967033_44967182_44976679
H1_mix_00058298	chr21	+	2515	5	FSM	ENSG00000182871.16	ENST00000473212.1	2515	5	0	0	0	0	multi-exon	FALSE	canonical	3	2369	junction_1	203.644758096053	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTTTTAAAAGTTTAAAA	1544	False	NA	21	True	AATAAA	-18	NA	45506018	45512567	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_45507594_45509355_45509602_45510063_45510262_45511110_45511227_45512187
H1_mix_00058305	chr21	+	3456	28	FSM	ENSG00000142173.16	ENST00000310645.9	3446	28	-10	0	-3	0	multi-exon	FALSE	canonical	2	11	junction_27	119.223205960527	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCAGAGTCCTTCTTTG	-21	True	NA	14	True	NA	NA	NA	46098108	46129805	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46098174_46111449_46111592_46111978_46112578_46112803_46112825_46114007_46114074_46115871_46115926_46116008_46116054_46116376_46116404_46116650_46116678_46116769_46116815_46117399_46117454_46117873_46117937_46118613_46118677_46119029_46119120_46119787_46119851_46120514_46120578_46121060_46121124_46121555_46121619_46122107_46122159_46122495_46122532_46122874_46122938_46124650_46124714_46124884_46124921_46125265_46125312_46125464_46125618_46125784_46126238_46126502_46126542_46128902
H1_mix_00058306	chr21	+	6434	27	FSM	ENSG00000142173.16	ENST00000409416.6	3367	27	-27	-3040	0	0	multi-exon	FALSE	canonical	2	11	junction_26	119.085916973006	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCGTGCCTGCTTGCGAGC	-5	True	NA	26	True	AATAAA	-14	NA	46111449	46132848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46111592_46111978_46112578_46112803_46112825_46114007_46114074_46115871_46115926_46116008_46116054_46116376_46116404_46116650_46116678_46116769_46116815_46117399_46117454_46117873_46117937_46118613_46118677_46119029_46119120_46119787_46119851_46120514_46120578_46121060_46121124_46121555_46121619_46122107_46122159_46122495_46122532_46122874_46122938_46124650_46124714_46124884_46124921_46125265_46125312_46125464_46125618_46125784_46126238_46126502_46126542_46128902
H1_mix_00058309	chr21	+	2336	3	FSM	ENSG00000215424.10	ENST00000455567.2	2373	3	37	0	-1	0	multi-exon	FALSE	canonical	2	4	junction_2	7	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAAAAAAAACACTT	12	True	NA	NA	False	TTTAAA	-7	NA	46229232	46251701	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_46229267_46240833_46241020_46249585
H1_mix_00058312	chr21	+	2879	20	ISM	ENSG00000160305.18	ENST00000435722.7	2760	21	-67	901	13	0	5prime_fragment	FALSE	canonical	1	31	junction_8	12.3539669181587	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCTTGGCCCAGTGTTT	33	True	NA	2	True	AATAAA	-14	NA	46458989	46546304	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr21_+_46459223_46484756_46484829_46490599_46490720_46496987_46497108_46498581_46498834_46504360_46504490_46509256_46509377_46511416_46511615_46529091_46529184_46532126_46532238_46533523_46533648_46534003_46534114_46534584_46534688_46537223_46537289_46537445_46537540_46538482_46538603_46539876_46539992_46541755_46541896_46545136_46545274_46545880
H1_mix_00058317	chr21	+	1410	8	ISM	ENSG00000160310.19	ENST00000397638.6	2131	11	61	3683	2	-2	5prime_fragment	FALSE	canonical	3	286	junction_7	140.175837097991	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTATGGTATTTGCATTAC	9	True	NA	1	True	AATAAA	-14	NA	46635675	46661268	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744_46658921_46660832
H1_mix_00058318	chr21	+	1170	7	NIC	ENSG00000160310.19	novel	1011	7	NA	NA	6	275	combination_of_known_junctions	FALSE	canonical	3	24	junction_6	228.783558558448	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTTGTACTGTTTTATT	20	True	NA	NA	False	NA	NA	NA	46635686	46653227	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46652844
H1_mix_00058322	chr21	-	3111	6	NIC	ENSG00000280071.4	novel	1584	7	NA	NA	-29	-5	intron_retention	FALSE	canonical	3	609	junction_1	93.7707843627214	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGACTTTGTGCTGCATTC	NA	False	NA	NA	False	AATAAA	-12	NA	5128442	5116345	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_5118848_5121710_5121804_5124755_5124876_5125878_5125993_5127897_5127951_5128213
H1_mix_00058325	chr21	-	1177	2	FSM	ENSG00000279094.3	ENST00000623227.1	674	2	0	-503	0	97	multi-exon	FALSE	canonical	3	41	junction_1	0	266	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGAGGCCAAGGTGGGT	48	False	NA	NA	False	NA	NA	NA	5502497	5499053	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_5500102_5502368
H1_mix_00058326	chr21	-	2706	4	FSM	ENSG00000275496.4	ENST00000621924.4	2380	4	0	-326	0	326	multi-exon	FALSE	canonical	3	24	junction_3	81.4138945280363	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTAAAATCTTGATTGAT	NA	False	NA	NA	False	AATAGA	-41	NA	6267304	6228639	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_6230952_6234982_6235148_6254790_6254850_6267134
H1_mix_00058327	chr21	-	2196	2	FSM	ENSG00000275496.4	ENST00000619488.1	2195	2	0	-1	0	0	multi-exon	FALSE	canonical	3	205	junction_1	0	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTCTCAAATTACTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	6235192	6228965	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_6230952_6234982
H1_mix_00058328	chr21	-	3074	2	ISM	ENSG00000275496.4	ENST00000621924.4	2380	4	9712	5910	9683	-2279	internal_fragment	FALSE	canonical	3	42	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAACATAATTTACAGTT	9689	False	NA	NA	False	TATAAA	-28	NA	6257592	6234875	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr21_-_6235148_6254790
H1_mix_00058329	chr21	-	2964	14	FSM	ENSG00000274276.5	ENST00000624691.3	2656	14	0	-308	0	308	multi-exon	FALSE	canonical	3	5	junction_13	701.565923888932	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGATGGAGTCTTGCTCT	7428	False	NA	NA	False	NA	NA	NA	6460082	6444560	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_6445662_6448480_6448566_6449822_6449932_6450511_6450647_6450903_6450982_6452118_6452225_6453988_6454074_6454630_6454757_6455577_6455670_6456880_6456951_6457064_6457200_6457293_6457374_6457920_6458056_6459455
H1_mix_00058330	chr21	-	1992	18	FSM	ENSG00000274276.5	ENST00000624934.3	1992	18	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	778.426204852704	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACAGAGCATCCGTCTCC	NA	False	NA	NA	False	NA	NA	NA	6467532	6445432	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_6445662_6447735_6447778_6448480_6448566_6449822_6449932_6450511_6450647_6450903_6450982_6452118_6452225_6453988_6454074_6454630_6454757_6455577_6455670_6456880_6456951_6457064_6457200_6457293_6457374_6457920_6458056_6460186_6460294_6463662_6463880_6464943_6465020_6467447
H1_mix_00058332	chr21	-	4715	7	FSM	ENSG00000275895.7	ENST00000624739.1	4715	7	0	0	0	0	multi-exon	FALSE	canonical	3	4529	junction_5	678.877668574309	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGGGTTTCTGAATAAAA	NA	False	NA	NA	False	TTTAAA	-26	NA	6499261	6484660	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_6484917_6486137_6486231_6486321_6486456_6487106_6487206_6487362_6487413_6492130_6496081_6499128
H1_mix_00058334	chr21	-	674	2	FSM	ENSG00000278878.1	ENST00000624181.1	674	2	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACATATTTATTAAAATTT	48	False	NA	NA	False	AATAAA	-15	NA	6670650	6667709	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_6668255_6670521
H1_mix_00058335	chr21	-	710	5	FSM	ENSG00000280018.4	ENST00000623165.3	710	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	19.3520024803636	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCGTTGATGTTACGTCCC	69	False	NA	NA	False	NA	NA	NA	6997699	6986449	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_6986649_6992109_6992323_6993498_6993597_6995221_6995314_6997591
H1_mix_00058337	chr21	-	936	3	FSM	ENSG00000280018.4	ENST00000624728.1	936	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	29	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCTTTTCATGACTGC	3	True	NA	NA	False	ATTAAA	-17	NA	6997765	6994373	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_6995033_6995221_6995325_6997591
H1_mix_00058338	chr21	-	5618	3	NIC	ENSG00000277991.4	novel	1469	2	NA	NA	-389	326	combination_of_known_junctions	FALSE	canonical	3	6	junction_2	82	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTAAAATCTTGATTGAT	NA	False	NA	NA	False	AATAGA	-41	NA	7679566	7669070	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_7671383_7675413_7675579_7676425
H1_mix_00058339	chr21	-	923	1	FSM	ENSG00000280614.1	ENST00000625598.1	923	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	413	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGAGAGGCAAGGGGCGGG	NA	False	NA	NA	False	NA	NA	NA	8394341	8393418	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_8393400_8394300
H1_mix_00058340	chr21	-	4210	2	Antisense	novelGene_ENSG00000278189.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACCTCCCCCCGGGCCCG	NA	False	NA	NA	False	NA	NA	NA	8446583	8398144	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr21_-_8400254_8444482
H1_mix_00058341	chr21	-	3815	1	Intergenic	novelGene_829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACGCGCGCGTGGCCCCGA	NA	False	NA	NA	False	NA	NA	NA	8401980	8398165	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr21_-_8398200_8402000
H1_mix_00058342	chr21	-	220	3	FSM	ENSG00000155307.19	ENST00000469393.5	220	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	17.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCATTATAAAAGTCTCT	437	False	NA	0	True	AATAAA	-17	NA	14616016	14612504	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_14612646_14612875_14612914_14615975
H1_mix_00058344	chr21	-	7562	3	FSM	ENSG00000180530.11	ENST00000400199.5	7562	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	12.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTTTGAAATGACTGTT	991	False	NA	-9	True	AATAAA	-20	NA	15064934	14961234	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_14968527_15043494_15043575_15064744
H1_mix_00058345	chr21	-	302	1	FSM	ENSG00000226580.1	ENST00000445481.1	146	1	20	-176	20	176	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATATGTGAGACCTTTCA	NA	False	NA	NA	False	NA	NA	NA	17500804	17500502	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_17500500_17500800
H1_mix_00058348	chr21	-	1090	4	FSM	ENSG00000154642.11	ENST00000400558.7	1090	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	72.4538167079938	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTCTAGGGCTAATCATT	264	False	NA	-17	True	AATAAA	-19	NA	17819386	17793246	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_17793582_17796581_17797119_17818191_17818326_17819302
H1_mix_00058357	chr21	-	558	5	NNC	ENSG00000154723.13	novel	589	5	NA	NA	0	55722	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2187.39902624098	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	-3	True	NA	NA	False	NA	NA	NA	25734904	25660780	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_25660814_25724500_25724678_25725225_25725351_25729630_25729802_25734852
H1_mix_00058359	chr21	-	619	3	FSM	ENSG00000154723.13	ENST00000486002.1	876	3	0	257	0	-257	multi-exon	FALSE	canonical	3	4615	junction_2	457.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAACTGGTGCATGTCTC	-3	True	NA	NA	False	NA	NA	NA	25734904	25724954	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_25725351_25729630_25729802_25734852
H1_mix_00058362	chr21	-	3295	16	FSM	ENSG00000142192.21	ENST00000359726.7	3294	16	0	-1	0	0	multi-exon	FALSE	canonical	0	0	junction_15	353.716810771304	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGTGCTGGTGTGAATG	-8	True	NA	-27	True	AATAAA	-19	NA	26171128	25880549	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_25881772_25891721_25891869_25897572_25897674_25905023_25905078_25911740_25911963_25954589_25954690_25955626_25955756_25975069_25975229_25975953_25976029_25982343_25982478_26021839_26022043_26050999_26051194_26053235_26053349_26089942_26090073_26111978_26112147_26170984
H1_mix_00058366	chr21	-	3846	19	FSM	ENSG00000156304.15	ENST00000434667.3	3846	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	96.7663598316157	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATACTGAAAATATGA	2	True	NA	-66	True	TTTAAA	-18	NA	31731968	31671227	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_31672355_31685048_31685241_31685397_31685485_31685567_31685734_31688306_31688465_31690796_31690954_31691816_31691931_31692348_31692450_31693293_31693485_31694203_31694290_31694812_31694981_31696112_31696222_31696568_31696751_31700994_31701172_31701775_31701919_31702243_31702380_31703764_31703927_31706273_31706358_31731662
H1_mix_00058369	chr21	-	4247	5	FSM	ENSG00000159079.19	ENST00000382549.8	2503	5	0	-1744	0	-569	multi-exon	FALSE	canonical	3	823	junction_4	47.5341982156005	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAAAAAGTCACTCACGC	-1	True	NA	NA	False	NA	NA	NA	32612586	32599922	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_32603293_32604124_32604284_32607648_32607717_32609837_32610006_32612104
H1_mix_00058372	chr21	-	3810	17	NIC	ENSG00000159086.15	novel	3892	18	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	8	junction_8	194.303956068192	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCTTTGTTGTATTTTCC	248	False	32771815	NA	False	ATTAAA	-15	NA	32771791	32733900	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_32735068_32737253_32737409_32738172_32738320_32743247_32743315_32743677_32743755_32744791_32744914_32745573_32745719_32748498_32748699_32751118_32751219_32755229_32755354_32759079_32759270_32759776_32759995_32761058_32761163_32762095_32762318_32764347_32764525_32769813_32769943_32771325
H1_mix_00058375	chr21	-	1951	6	FSM	ENSG00000159086.15	ENST00000464256.1	1692	6	-259	0	-259	0	multi-exon	FALSE	canonical	3	148	junction_3	13.2453765518388	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAGATGCCATTCCAAA	-12	True	NA	NA	False	AAAAAG	-10	NA	32772051	32759401	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_32759995_32761058_32761163_32762095_32762318_32764347_32764525_32769813_32769943_32771325
H1_mix_00058379	chr21	-	4220	22	FSM	ENSG00000159131.17	ENST00000381839.7	3469	22	0	-751	0	751	multi-exon	FALSE	canonical	3	13	junction_21	409.648353155033	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTTCTGATCTTTGAT	-5	True	NA	-23	True	AATAAA	-36	NA	33542861	33503179	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33504316_33504411_33504528_33505560_33505703_33505973_33506105_33509782_33509921_33511251_33511459_33516988_33517142_33517356_33517609_33520363_33520563_33520905_33521016_33522187_33522283_33524768_33525001_33528166_33528336_33528518_33528605_33528849_33528938_33530758_33530885_33531488_33531558_33532344_33532457_33534578_33534754_33535224_33535321_33539170_33539357_33542659
H1_mix_00058388	chr21	-	816	8	FSM	ENSG00000241837.7	ENST00000652380.1	816	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	1938.44804323627	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTATGTTCACTGTCTT	5	True	NA	-29	True	AATAAA	-18	NA	33915814	33903454	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33903640_33903934_33904022_33906448_33906501_33907340_33907454_33909081_33909212_33912288_33912400_33914449_33914501_33915727
H1_mix_00058392	chr21	-	3241	13	NNC	ENSG00000185917.14	novel	2991	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_5	76.5398861161072	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTCATTGTGCTTTCC	-27	True	NA	-8	True	ATTAAA	-16	NA	36060526	36034541	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_36035961_36036084_36036252_36038149_36038274_36040574_36040656_36041806_36041889_36043400_36043652_36043781_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36058815_36058925_36060346
H1_mix_00058393	chr21	-	3274	12	NIC	ENSG00000185917.14	novel	2991	12	NA	NA	-287	-8	combination_of_known_junctions	FALSE	canonical	3	20	junction_7	91.2599592663138	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACCCTACATGGTCATTG	NA	False	NA	-16	True	ATTAAA	-8	NA	36060813	36034549	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_36035961_36036084_36036252_36038149_36038274_36040574_36040656_36041806_36041889_36043781_36043957_36045581_36046012_36053582_36053621_36057108_36057205_36057383_36057478_36058815_36058925_36060346
H1_mix_00058394	chr21	-	1852	11	NIC	ENSG00000185917.14	novel	3258	12	NA	NA	-279	-47	combination_of_known_junctions	FALSE	canonical	3	42	junction_10	88.1133361075382	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTTTTACCTGATTTCA	NA	False	NA	NA	False	NA	NA	NA	36060805	36036131	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_36036252_36038149_36038274_36040574_36040656_36041806_36041889_36043781_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36058815_36058974_36060346
H1_mix_00058397	chr21	-	6056	12	FSM	ENSG00000159267.17	ENST00000612277.4	6112	12	56	0	56	0	multi-exon	FALSE	canonical	1	1	junction_11	30.912833997955	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGATTGTTTTTAGGATT	9311	False	NA	-3	True	AATAAA	-16	NA	36980908	36750887	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_36754418_36756541_36756756_36759726_36759842_36765011_36765173_36767217_36767286_36896859_36897132_36930250_36930434_36936448_36937393_36938831_36938995_36946008_36946155_36962035_36962171_36980783
H1_mix_00058400	chr21	-	4125	12	NIC	ENSG00000159267.17	novel	6466	12	NA	NA	35	-630	combination_of_known_junctions	FALSE	canonical	2	6	junction_9	25.9729675109009	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGGAAATGAGGCTTCA	30	False	NA	-7	True	ATTAAA	-17	NA	36990189	36752701	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_36754418_36756541_36756756_36759726_36759842_36765011_36765173_36767217_36767286_36896859_36897132_36930250_36930434_36936448_36937393_36938831_36938995_36948165_36948288_36962035_36962171_36990157
H1_mix_00058404	chr21	-	801	3	NNC	ENSG00000185808.14	novel	3437	4	NA	NA	0	-1735	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	15	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACACTGGCTGACTTCAC	17	True	NA	NA	False	AATAAA	-22	NA	37072537	37071286	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_37071818_37072144_37072311_37072433
H1_mix_00058405	chr21	-	5330	2	FSM	ENSG00000157538.14	ENST00000497493.1	5648	2	318	0	318	0	multi-exon	FALSE	canonical	3	382	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGCTTTCCTTAGAGAA	NA	False	NA	NA	False	AATAAA	-22	NA	37229165	37223419	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_37227807_37228222
H1_mix_00058414	chr21	-	2720	8	FSM	ENSG00000205581.11	ENST00000492280.5	2707	8	3	-16	3	16	multi-exon	FALSE	canonical	0	0	junction_7	2596.09990059658	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATTCTGGTTTAAATTT	41	False	NA	14	True	AATAAA	-35	NA	39349341	39342298	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_39343160_39345145_39345275_39345829_39347293_39347378_39347484_39348291_39348340_39348421_39348452_39348544_39348578_39349290
H1_mix_00058423	chr21	-	3437	14	FSM	ENSG00000184012.14	ENST00000678171.1	3446	14	0	9	0	-9	multi-exon	FALSE	canonical	2	3	junction_1	40.4025601157318	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGCAATTTACAAAAGAAAGA	-2	True	NA	NA	False	AATAAA	-15	NA	41508158	41464313	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_41466150_41467733_41467887_41468395_41468539_41470647_41470744_41471805_41471982_41473324_41473497_41476576_41476621_41479171_41479283_41480475_41480603_41488393_41488514_41489506_41489594_41494355_41494579_41498118_41498190_41508080
H1_mix_00058436	chr21	-	1192	10	NIC	ENSG00000160193.12	novel	1471	12	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	3	45	junction_7	83.0675762390009	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGTGAGATTTACATTAT	22	True	NA	-28	True	AGTAAA	-15	NA	42879522	42843093	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_42843282_42850040_42850243_42852254_42852325_42853568_42853753_42854561_42854627_42855681_42855781_42859661_42859723_42873550_42873692_42876701_42876768_42879406
H1_mix_00058437	chr21	-	2205	11	FSM	ENSG00000160193.12	ENST00000492742.5	2205	11	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_10	106.958356382286	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGCCTGCGCTGTGTG	303	False	NA	-2	True	AATATA	-14	NA	42879275	42849225	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_42850243_42852254_42852325_42853568_42853753_42854561_42854627_42855681_42855781_42859661_42859723_42862281_42862395_42863439_42863597_42873602_42873692_42876701_42876768_42878991
H1_mix_00058443	chr21	-	3917	18	FSM	ENSG00000160200.18	ENST00000359624.7	2353	18	0	-1564	0	1564	multi-exon	FALSE	canonical	3	44	junction_17	715.907969960726	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGAGCCACTGCGCCTCG	14	True	NA	NA	False	NA	NA	NA	43076362	43051626	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_43053648_43053861_43053984_43056802_43056888_43058144_43058254_43058833_43058969_43059225_43059304_43060440_43060547_43062310_43062396_43062952_43063079_43063899_43063992_43065202_43065273_43065386_43065522_43065615_43065696_43066242_43066378_43068508_43068616_43071984_43072202_43073265_43073342_43076224
H1_mix_00058448	chr21	-	1686	3	FSM	ENSG00000160201.12	ENST00000471250.5	1676	3	0	-10	0	10	multi-exon	FALSE	canonical	3	5420	junction_1	473.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTATTTCTTGTGGAAGT	9216	False	NA	NA	False	AATAAA	-30	NA	43095943	43092945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_43093250_43094470_43094564_43094654
H1_mix_00058449	chr21	-	992	10	NNC	ENSG00000160201.12	novel	966	9	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_9	2659.01286798292	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGGTGTAACTTATTTC	98	False	NA	NA	False	AATAAA	-20	NA	43107496	43092955	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_43093250_43094470_43094564_43094654_43094789_43095437_43095537_43095693_43095744_43100452_43100520_43101365_43101433_43104314_43104403_43105501_43105556_43107450
H1_mix_00058455	chr21	-	933	4	FSM	ENSG00000184787.19	ENST00000497630.5	933	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	251.384168157026	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCCTGGTTCCCTGTGG	3	True	NA	NA	False	NA	NA	NA	44801819	44770930	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_44771490_44773546_44773688_44777298_44777418_44801705
H1_mix_00058470	chr21	-	4846	21	NIC	ENSG00000160285.15	novel	4886	22	NA	NA	-4	0	intron_retention	FALSE	canonical	3	80	junction_4	125.129572843513	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGTGATTAAAAATCAGTC	NA	False	NA	-29	True	NA	NA	NA	46228828	46188473	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_46191236_46191880_46191960_46194490_46194662_46195675_46195757_46205835_46205942_46206671_46206769_46207427_46207578_46208250_46208302_46209553_46209626_46210687_46210745_46213024_46213053_46213737_46213836_46215179_46215299_46215684_46215794_46216388_46216525_46219475_46219573_46221853_46221976_46222629_46222739_46227551_46227691_46228433_46228600_46228731
H1_mix_00058471	chr21	-	4166	21	NIC	ENSG00000160285.15	novel	4886	22	NA	NA	8	-2	combination_of_known_splicesites	TRUE	canonical	3	30	junction_20	164.437526130747	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGTCACACTGTGTTT	32	True	NA	-9	True	AATAAA	-23	NA	46228754	46189126	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_46191236_46191880_46191960_46194490_46194662_46195675_46195757_46205835_46205942_46206671_46206769_46207427_46207578_46208250_46208302_46209553_46209626_46210687_46210745_46213024_46213053_46213737_46213836_46215179_46215299_46215684_46215794_46216388_46216525_46219475_46219573_46221853_46221976_46222629_46222739_46227551_46227691_46228433_46228600_46228684
H1_mix_00058475	chr21	-	4593	18	FSM	ENSG00000160294.11	ENST00000486937.5	4593	18	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_14	41.0949613426131	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCCCAGTTTTTCATAAT	NA	False	NA	-11	True	GATAAA	-15	NA	46268062	46235132	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_46235427_46236828_46236980_46240810_46241018_46242801_46242932_46243464_46243723_46244806_46245198_46246306_46246887_46251528_46251683_46254391_46254527_46254775_46254845_46256788_46256987_46258938_46259092_46260792_46260907_46261279_46261412_46264116_46264218_46265320_46265524_46265924_46266167_46266981
H1_mix_00058476	chr21	-	6333	29	FSM	ENSG00000160294.11	ENST00000397708.1	6333	29	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_28	65.6112060332902	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCCCAGTTTTTCATAAT	3	True	NA	-11	True	GATAAA	-15	NA	46286297	46235132	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_46235427_46236828_46236980_46240810_46241018_46242801_46242932_46243464_46243723_46244806_46245198_46246306_46246405_46246627_46246887_46251528_46251683_46254391_46254527_46254775_46254845_46256788_46256987_46258938_46259092_46260792_46260907_46261279_46261412_46264116_46264218_46265320_46265524_46265924_46266167_46266981_46267143_46270400_46270564_46272560_46272830_46273387_46273586_46275185_46275326_46277526_46277718_46279992_46280138_46280496_46280576_46283614_46283839_46284067_46285395_46286150
H1_mix_00058480	chr21	-	5331	7	NNC	ENSG00000160298.18	novel	2970	8	NA	NA	-271	182	intron_retention	FALSE	canonical	3	13	junction_6	26.119384032213	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTCTTACCATGTGGACA	322	False	NA	NA	False	NA	NA	NA	46324146	46300947	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_46302577_46311455_46311568_46314715_46314881_46315473_46315548_46317207_46317349_46318011_46318221_46321145
H1_mix_00058485	chr21	+	3090	1	Intergenic	novelGene_812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGCCGCGTGGGGGCGGCG	1	True	NA	NA	False	NA	NA	NA	8213885	8216975	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr21_+_8213900_8217000
H1_mix_00058486	chr21	+	1517	1	Intergenic	novelGene_813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGGCGCGCCCCGCTTCTTC	23	False	NA	NA	False	NA	NA	NA	8217574	8219091	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr21_+_8217600_8219100
H1_mix_00058487	chr21	+	612	1	Intergenic	novelGene_816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGGTACAGTGAACTGCGA	2678	False	NA	NA	False	NA	NA	NA	8253299	8253911	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr21_+_8253300_8253900
H1_mix_00058488	chr21	+	1088	1	Intergenic	novelGene_819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	200	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCGGGGCGGACTGTCCC	79	False	NA	NA	False	NA	NA	NA	8258184	8259272	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr21_+_8258200_8259300
H1_mix_00058489	chr21	+	1645	1	Intergenic	novelGene_820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	NNNNNNNNNNNNNNNNNNNN	732	False	NA	NA	False	NA	NA	NA	8259327	8260972	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr21_+_8259300_8261000
H1_mix_00058490	chr21	+	2914	1	Intergenic	novelGene_830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCGTGGGTCGACCTCCG	-6	True	NA	NA	False	NA	NA	NA	8433221	8436135	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr21_+_8433200_8436100
H1_mix_00058508	chr21	+	566	3	FSM	ENSG00000224905.8	ENST00000653756.2	578	3	12	0	6	0	multi-exon	FALSE	canonical	1	1	junction_2	42.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAATTTTCTTCATTGA	-12	True	NA	NA	False	AAAAAG	-20	NA	14027426	14088783	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_+_14027598_14083949_14084145_14088583
H1_mix_00058529	chr21	+	7830	46	NNC	ENSG00000182670.13	novel	7712	46	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_32	124.286872463131	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTTCACTGTCACTCTT	-2	True	NA	13	True	AATAAA	-16	NA	37073265	37203103	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_+_37073474_37087246_37087402_37087832_37087876_37088195_37088347_37088798_37088887_37090232_37090287_37091292_37091414_37094004_37094091_37095349_37095445_37096580_37096644_37108391_37108447_37121816_37121980_37122982_37123029_37124618_37124743_37126079_37126144_37129002_37129064_37132681_37132767_37135379_37135515_37138633_37138715_37140560_37140674_37144524_37144646_37147480_37147604_37148545_37148648_37150077_37150171_37150819_37150885_37151892_37152030_37152950_37153278_37156654_37156907_37159698_37159746_37160801_37160859_37161989_37162064_37164050_37164220_37165549_37166616_37167554_37167621_37172594_37172745_37182773_37182914_37185705_37185775_37187048_37187146_37188494_37188596_37191333_37191425_37192111_37192214_37195674_37196037_37197569_37197697_37197881_37198026_37200231_37200325_37201439
H1_mix_00058530	chr21	+	6901	38	NIC	ENSG00000182670.13	novel	7712	46	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_20	95.0326997661102	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTTCACTGTCACTCTT	12	True	NA	13	True	AATAAA	-16	NA	37073279	37203103	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_+_37073365_37108391_37108447_37121816_37121980_37122982_37123029_37124618_37124743_37126079_37126144_37129002_37129064_37132681_37132767_37135379_37135515_37138633_37138715_37140560_37140674_37144524_37144646_37147480_37147604_37148545_37148648_37150077_37150171_37150819_37150885_37151892_37152030_37152950_37153278_37156654_37156907_37157160_37157215_37159698_37159746_37160801_37160859_37161989_37162064_37164050_37164216_37165549_37166616_37167554_37167621_37172594_37172745_37182773_37182914_37185705_37185775_37187048_37187146_37188494_37188596_37191333_37191425_37192111_37192214_37195674_37196037_37197569_37197697_37197881_37198026_37200231_37200325_37201439
H1_mix_00058531	chr21	+	12441	47	NIC	ENSG00000182670.13	novel	10363	46	NA	NA	-2033	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_29	127.729140995144	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTTCACTGTCACTCTT	10	False	NA	13	True	AATAAA	-16	NA	37079562	37203103	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_+_37084332_37087246_37087402_37087832_37087876_37088195_37088347_37088798_37088887_37090232_37090287_37091292_37091414_37094004_37094091_37095349_37095445_37096580_37096644_37108391_37108447_37121816_37121980_37122982_37123029_37124618_37124743_37126079_37126144_37129002_37129064_37132681_37132767_37135379_37135515_37138633_37138715_37140560_37140674_37144524_37144646_37147480_37147604_37148545_37148648_37150077_37150171_37150819_37150885_37151892_37152030_37152950_37153278_37156654_37156907_37157160_37157215_37159698_37159746_37160801_37160859_37161989_37162064_37164050_37164216_37165549_37166616_37167554_37167621_37172594_37172745_37182773_37182914_37185705_37185775_37187048_37187146_37188494_37188596_37191333_37191425_37192111_37192214_37195674_37196037_37197569_37197697_37197881_37198026_37200231_37200325_37201439
H1_mix_00058541	chr21	+	5646	11	NNC	ENSG00000160199.15	novel	1429	9	NA	NA	469	304	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	71.7827277274972	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAATGTGGGGCCTCAGGC	404	False	NA	NA	False	NA	NA	NA	42975130	43034235	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_+_42975276_43004325_43004433_43007490_43007619_43010052_43010225_43013067_43013239_43016907_43017008_43018132_43018231_43021302_43021432_43024870_43024948_43028701_43028875_43029889
H1_mix_00058551	chr21	+	3705	7	Fusion	ENSG00000235890.2_ENSG00000228709.2	novel	2108	6	NA	NA	94	-224	intron_retention	FALSE	canonical	2	4	junction_5	8.9333955221716	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTGCTCCTGCTTAGGG	11	False	NA	NA	False	NA	NA	NA	44485579	44516351	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr21_+_44486231_44506646_44508310_44508726_44508930_44509078_44509205_44509312_44509415_44509822_44509928_44515496
H1_mix_00058560	chr21	+	6166	39	NNC	ENSG00000160305.18	novel	6946	39	NA	NA	0	1830	at_least_one_novel_splicesite	TRUE	canonical	1	4	junction_38	18.5541992618735	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGACAATTTGACTTCCT	-7	True	NA	NA	False	AATATA	-20	NA	46458949	46571845	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_+_46459223_46484756_46484829_46490599_46490720_46496987_46497108_46498581_46498834_46504360_46504490_46509256_46509377_46511416_46511615_46529091_46529184_46532126_46532238_46533523_46533648_46534003_46534114_46534584_46534688_46537223_46537289_46537445_46537540_46538482_46538603_46539876_46539992_46541755_46541896_46545136_46545274_46545880_46545962_46546914_46547043_46549770_46549886_46550542_46550745_46551633_46551744_46551823_46551905_46554168_46554293_46554574_46554697_46554821_46554934_46555981_46556092_46556938_46557070_46557584_46557754_46558222_46558394_46560721_46560784_46561747_46561806_46563857_46563933_46565712_46565888_46566559_46566684_46567369_46567675_46570629
H1_mix_00058584	chr21	-	1243	6	FSM	ENSG00000159079.19	ENST00000300260.7	1243	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	372.044298437699	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCACTTACTGCCCTCTGT	246	False	NA	NA	False	TTTAAA	-12	NA	32612603	32601784	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_32601974_32602271_32602368_32603160_32603293_32604124_32604284_32609837_32610006_32612104
H1_mix_00058585	chr21	-	3092	3	ISM	ENSG00000159086.15	ENST00000497873.1	2277	10	12184	-927	3328	0	3prime_fragment	FALSE	canonical	3	605	junction_1	9.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGTTGTATTTTCCTG	NA	False	NA	NA	False	ATTAAA	-17	NA	32739940	32733898	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr21_-_32735068_32737253_32737409_32738172
H1_mix_00058589	chr21	-	3977	22	Fusion	ENSG00000159147.18_ENSG00000205758.12	novel	1598	13	NA	NA	0	-65	multi-exon	FALSE	canonical	0	0	junction_11	78.626503064342	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACACCAAAGTAAGCCTAAAA	2212	False	NA	NA	False	NA	NA	NA	33641720	33578306	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr21_-_33578445_33579349_33579563_33581301_33581501_33581950_33582056_33582164_33582247_33583487_33583667_33584589_33584769_33585977_33586182_33587521_33587603_33588320_33589922_33591161_33591208_33595730_33595837_33597279_33597402_33599149_33599249_33602233_33602346_33603403_33603538_33613537_33613607_33616705_33616751_33621995_33622069_33624682_33624761_33631485_33631558_33641680
H1_mix_00058591	chr21	-	2031	12	FSM	ENSG00000205758.12	ENST00000420072.5	2558	12	546	-19	-33	0	multi-exon	FALSE	canonical	0	0	junction_1	119.008993340284	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTTACGTAATTAGTAT	2140	False	NA	NA	False	NA	NA	NA	33641792	33594642	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_33595615_33595730_33595837_33597279_33597402_33599149_33599286_33602233_33602346_33603403_33603538_33613537_33613607_33616705_33616751_33621995_33622069_33624682_33624761_33631485_33631558_33641680
H1_mix_00058592	chr21	-	1381	12	NIC	ENSG00000205758.12	novel	2224	13	NA	NA	24	-29	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	96.6435043970818	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGTAAAAATAATAAAAAGTT	2236	False	NA	NA	False	NA	NA	NA	33641696	33595159	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_33595615_33595730_33595837_33597279_33597402_33599149_33599249_33602233_33602346_33603403_33603538_33613537_33613607_33616705_33616751_33621995_33622069_33624682_33624761_33631485_33631558_33641680
H1_mix_00058597	chr21	-	3486	13	NNC	ENSG00000185917.14	novel	2991	12	NA	NA	1	-14	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_12	89.4085504238207	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCGCAGACCCTACATGG	7	True	NA	-22	True	ATTAAA	-2	NA	36060260	36034555	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_36035961_36036084_36036252_36038149_36038274_36040574_36040656_36041806_36041889_36043400_36043652_36043781_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36058815_36058925_36059821
H1_mix_00058598	chr21	-	1863	13	NNC	ENSG00000185917.14	novel	3258	12	NA	NA	11	-42	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_4	89.1266265240391	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACCTGATTTCACCGAA	-16	True	NA	NA	False	NA	NA	NA	36060515	36036126	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_36036252_36038149_36038274_36040574_36040656_36041806_36041889_36043400_36043652_36043781_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36057383_36057478_36058815_36058925_36060346
H1_mix_00058603	chr21	-	2998	8	NNC	ENSG00000157538.14	novel	3056	8	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	134.227342936664	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGACTGCTTTCCTTAGAG	255	False	NA	NA	False	AATAAA	-20	NA	37267295	37223421	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_37225627_37227653_37227807_37228241_37228374_37232376_37232452_37233361_37233443_37238459_37238610_37240495_37240640_37267237
H1_mix_00058612	chr21	-	2412	8	NNC	ENSG00000184012.14	novel	3243	12	NA	NA	-9113	-8	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_7	45.9889072694355	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAAGTAACTACTGCATC	NA	False	NA	-8	True	AATAAA	-16	NA	41477950	41464560	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr21_-_41466154_41467733_41467887_41468395_41468539_41470647_41470744_41471805_41471982_41473324_41473497_41476576_41476621_41477915
H1_mix_00058614	chr21	-	2098	2	NIC	ENSG00000236384.7	novel	560	4	NA	NA	-522	59	intron_retention	FALSE	canonical	3	56	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATAGATGTATTTCATGT	NA	False	NA	-11	True	AATAAA	-21	NA	41714577	41711460	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_41713001_41714019
H1_mix_00058617	chr21	-	2493	3	NIC	ENSG00000236384.7	novel	2033	6	NA	NA	-554	54	intron_retention	FALSE	canonical	3	63	junction_1	35.5	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACATTCATAGATGTATTT	NA	False	NA	-16	True	AATAAA	-16	NA	41714609	41711465	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr21_-_41713001_41713550_41714133_41714233
H1_mix_00058623	chr21	-	3360	2	FSM	ENSG00000160201.12	ENST00000478282.1	3344	2	0	-16	0	16	multi-exon	FALSE	canonical	3	6367	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTGGAAGTTCTTTA	8769	False	NA	NA	False	AATAAA	-36	NA	43096390	43092939	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_43094564_43094654
H1_mix_00058624	chr21	-	1691	7	FSM	ENSG00000160201.12	ENST00000459639.5	1675	7	0	-16	0	16	multi-exon	FALSE	canonical	3	4090	junction_6	932.820707436441	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTGGAAGTTCTTTA	2342	False	NA	NA	False	AATAAA	-36	NA	43105252	43092939	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_43093250_43094470_43094564_43094654_43094789_43095437_43095537_43095693_43095744_43100452_43100520_43104314
H1_mix_00058629	chr21	-	4491	6	FSM	ENSG00000160226.16	ENST00000462742.1	4532	6	41	0	41	0	multi-exon	TRUE	canonical	2	7	junction_1	67.2773364514381	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGGAGGTGACGTTTCC	7587	False	NA	-25	True	AATAAA	-17	NA	44338743	44329890	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_44330327_44330462_44332015_44333032_44333263_44334060_44335805_44337648_44337668_44338233
H1_mix_00058630	chr21	-	1634	7	FSM	ENSG00000160226.16	ENST00000397956.7	1634	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	56.8262458923887	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGGAGGTGACGTTTCC	-2	True	NA	-25	True	AATAAA	-17	NA	44339393	44329890	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr21_-_44330327_44330462_44330917_44331842_44332015_44333032_44333263_44335757_44335805_44337648_44337668_44339117
H1_mix_00058649	chr22	+	274	1	FSM	ENSG00000226160.1	ENST00000427602.1	88	1	-1	-185	-1	185	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTTCAAAGGATTAATGT	NA	False	NA	NA	False	ATTAAA	-19	NA	16405328	16405602	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_16405300_16405600
H1_mix_00058650	chr22	+	8511	12	FSM	ENSG00000177663.14	ENST00000612619.1	8506	12	-13	8	-8	-7	multi-exon	FALSE	canonical	1	6	junction_9	20.426445344736	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCATGGCCTTGTTCTT	1372	False	NA	NA	False	AATAAA	-10	NA	17084945	17115686	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_17085230_17097061_17097087_17097796_17097944_17098774_17098888_17100354_17100482_17101995_17102044_17102138_17102303_17103493_17103578_17104725_17104811_17105590_17105603_17107726_17107769_17108306
H1_mix_00058651	chr22	+	8566	13	FSM	ENSG00000177663.14	ENST00000319363.11	8566	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	21.7517559955257	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTTGTTCTTCTTATTC	21	True	NA	NA	False	AATAAA	-17	NA	17084999	17115693	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_17085230_17097061_17097087_17097796_17097944_17098774_17098888_17100354_17100482_17101995_17102044_17102138_17102303_17103493_17103578_17104725_17104811_17105590_17105603_17105852_17105955_17107726_17107769_17108306
H1_mix_00058652	chr22	+	347	2	FSM	ENSG00000185837.4	ENST00000329743.4	379	2	13	19	8	-19	multi-exon	FALSE	canonical	3	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATTTTTATTCTCATAT	1	True	NA	-12	True	AATAAA	-3	NA	17159364	17165428	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_17159552_17165268
H1_mix_00058654	chr22	+	12362	18	NNC	ENSG00000099954.19	novel	10030	19	NA	NA	2	2502	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	6.82099344356036	143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCACGGTCTCCCTCTCA	2	True	NA	NA	False	NA	NA	NA	17369461	17560653	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_17369910_17477587_17477683_17497402_17497587_17499409_17499550_17500630_17500736_17503081_17503132_17504846_17505017_17524117_17524272_17537102_17537233_17538519_17538558_17538639_17538732_17538992_17539120_17540411_17540717_17541838_17541968_17542156_17543004_17548147_17549565_17552030_17552143_17552834
H1_mix_00058655	chr22	+	9964	18	NIC	ENSG00000099954.19	novel	10030	19	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_17	6.21249995648632	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCCTCTGTGTGTGTGGT	-18	True	NA	46	True	TATAAA	-21	NA	17369441	17558151	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_17369910_17477587_17477683_17497402_17497587_17499409_17499550_17500630_17500736_17503081_17503132_17504846_17505017_17524117_17524272_17537102_17537233_17538519_17538558_17538639_17538732_17538992_17539120_17540411_17540801_17541838_17541968_17542156_17543004_17548147_17549565_17552030_17552143_17552834
H1_mix_00058656	chr22	+	1132	1	FSM	ENSG00000229492.1	ENST00000455617.1	1132	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGATTGAGTTTCGAAAG	6188	False	NA	-29	True	AATATA	-13	NA	17418696	17419828	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_17418700_17419800
H1_mix_00058657	chr22	+	1778	9	NNC	ENSG00000182902.14	novel	2454	4	NA	NA	10950	4	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_1	8.8140512819021	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATCTGTTCATCAGTGG	NA	False	NA	7	True	AATAAA	-16	NA	17580656	17590885	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_17580858_17581036_17581160_17581357_17581414_17582562_17582654_17583415_17583535_17587135_17587302_17587924_17588080_17589589_17589666_17590094
H1_mix_00058658	chr22	+	4961	6	FSM	ENSG00000099968.18	ENST00000618481.4	4961	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	72.7725222869182	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATAATCTCTCAATTAT	9725	False	NA	NA	False	NA	NA	NA	17638583	17730855	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_17638887_17683213_17683322_17688985_17689143_17696140_17696211_17702242_17702387_17726676
H1_mix_00058659	chr22	+	5161	6	FSM	ENSG00000099968.18	ENST00000418951.6	5062	6	0	-99	0	99	multi-exon	FALSE	canonical	3	26	junction_4	92.4025973660914	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCATTTATAACATGCCA	9725	False	NA	NA	False	NA	NA	NA	17638583	17730954	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_17638887_17655661_17655833_17683213_17683322_17688985_17689143_17702242_17702387_17726676
H1_mix_00058660	chr22	+	2127	6	FSM	ENSG00000099968.18	ENST00000493680.5	2112	6	-15	0	0	0	multi-exon	FALSE	canonical	3	175	junction_4	40.0869055927244	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAATATTTTTTGAGC	8	True	NA	-31	True	AATAAA	-24	NA	17638756	17703733	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_17638887_17655661_17655833_17683213_17683322_17688985_17689143_17696140_17696211_17702242
H1_mix_00058661	chr22	+	4973	7	FSM	ENSG00000099968.18	ENST00000317582.10	4959	7	-16	2	0	-2	multi-exon	FALSE	canonical	3	155	junction_6	45.3336397048471	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTGATAATCTCTCAATT	-8	True	NA	NA	False	NA	NA	NA	17638740	17730853	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_17638887_17655661_17655833_17683213_17683322_17688985_17689143_17696140_17696211_17702242_17702387_17726676
H1_mix_00058662	chr22	+	1369	1	FSM	ENSG00000269220.1	ENST00000600723.1	2160	1	-1	792	-1	-792	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTCGTGCACGTGTGTTT	-16	True	NA	NA	False	NA	NA	NA	17777320	17778689	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_17777300_17778700
H1_mix_00058663	chr22	+	18634	5	FSM	ENSG00000215193.14	ENST00000399744.8	18626	5	-8	0	-8	0	multi-exon	FALSE	canonical	3	8	junction_4	7.79021822544144	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTTTGTTGTGAGGAATA	-21	True	NA	2	True	AATAAA	-13	NA	18077981	18105396	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_18078607_18079873_18080015_18083436_18083733_18085111_18085259_18087971
H1_mix_00058664	chr22	+	1823	10	NIC	ENSG00000184979.10	novel	1858	11	NA	NA	-228	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	8.90831211236775	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTTGCAGTTTTAACGG	-24	True	NA	NA	False	AATAAA	-17	NA	18149941	18177397	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_18150223_18160171_18160269_18161789_18161936_18167254_18167335_18167889_18168037_18169843_18169940_18170752_18170921_18173149_18173282_18173792_18173843_18176771
H1_mix_00058665	chr22	+	1426	5	FSM	ENSG00000183628.14	ENST00000331444.12	1117	5	-315	6	-23	0	multi-exon	FALSE	canonical	3	73	junction_3	23.0705439901187	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGCATGTGGCTTGTGTGA	NA	False	NA	NA	False	AATAAA	-16	NA	18906004	18912082	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_18906485_18906564_18906726_18910171_18910273_18910887_18911029_18911539
H1_mix_00058666	chr22	+	1062	5	FSM	ENSG00000183628.14	ENST00000413981.5	1039	5	-23	0	-23	0	multi-exon	FALSE	canonical	1	1	junction_1	49.0739238292599	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTTGTGTGATAGCTG	NA	False	NA	NA	False	AATAAA	-22	NA	18906004	18912088	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_18906115_18906564_18906726_18910171_18910273_18910887_18911029_18911539
H1_mix_00058667	chr22	+	3250	5	FSM	ENSG00000183628.14	ENST00000483718.5	3245	5	-5	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	47.5420866180693	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATCTTTTTCCTTTAAC	-9	True	NA	NA	False	ATTAAA	-18	NA	18906319	18914238	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_18906468_18906564_18906726_18910171_18910273_18910887_18911029_18911539
H1_mix_00058668	chr22	+	1839	2	FSM	ENSG00000183628.14	ENST00000608842.1	1837	2	-2	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTACTGGGTCGTGCTGTA	22	True	NA	NA	False	NA	NA	NA	18906350	18908269	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_18906485_18906564
H1_mix_00058669	chr22	+	1199	6	FSM	ENSG00000183628.14	ENST00000427407.5	1199	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	52.2264300905203	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGCATGTGGCTTGTGTGA	22	True	NA	NA	False	AATAAA	-16	NA	18906350	18912082	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_18906485_18906564_18906726_18909979_18910099_18910171_18910273_18910887_18911029_18911539
H1_mix_00058670	chr22	+	3765	2	NNC	ENSG00000284294.1	novel	1382	4	NA	NA	-771	20	intron_retention	FALSE	canonical	3	39	junction_1	0	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTCTCTGTGTCTTTTTCT	1266	False	NA	26	True	NA	NA	NA	18938674	18947761	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_18939750_18945071
H1_mix_00058671	chr22	+	8846	1	Genic_Genomic	ENSG00000284294.1_ENSG00000283809.1	novel	NA	NA	NA	NA	-534	16	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTGTCTCTGTGTCTTT	1503	False	NA	22	True	NA	NA	NA	18938911	18947757	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr22_+_18938900_18947800
H1_mix_00058672	chr22	+	1221	2	ISM	ENSG00000284294.1	ENST00000640084.1	1382	4	3087	-18	52	18	3prime_fragment	FALSE	canonical	3	38	junction_1	0	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCTCTGTGTCTTTTT	2089	False	NA	24	True	NA	NA	NA	18939497	18947759	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_+_18939750_18946790
H1_mix_00058673	chr22	+	5492	5	FSM	ENSG00000273032.3	ENST00000438934.5	5492	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	1.92028643696715	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGCCAGAGTCTGTGAAG	27	True	NA	7	True	ATTAAA	-16	NA	18970513	18994628	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_18970659_18987756_18987901_18988090_18988196_18989416_18989466_18989579
H1_mix_00058674	chr22	+	3104	3	ISM	ENSG00000273032.3	ENST00000675978.1	3828	6	55	25582	45	-2	5prime_fragment	FALSE	canonical	3	6	junction_1	7.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTGGCCAGAGTCTGTGA	35	False	NA	5	True	ATTAAA	-14	NA	18970569	18994626	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_+_18970659_18990719_18990925_18991816
H1_mix_00058675	chr22	+	744	4	FSM	ENSG00000185608.9	ENST00000333130.4	744	4	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_1	45.38232646698	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCCTTTGTCTTGTGTTA	7	True	NA	26	True	AATAAA	-18	NA	19432544	19436075	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_19432608_19433264_19433349_19434735_19434895_19435637
H1_mix_00058676	chr22	+	1043	4	FSM	ENSG00000185608.9	ENST00000443660.5	954	4	-146	57	-112	0	multi-exon	FALSE	canonical	3	26	junction_1	180.342883296113	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCAAGTCTGCTTT	3	True	NA	-39	True	NA	NA	NA	19432432	19436010	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_19432860_19433264_19433349_19434735_19434895_19435637
H1_mix_00058677	chr22	+	1019	3	FSM	ENSG00000185608.9	ENST00000471259.1	942	3	-77	0	-77	0	multi-exon	FALSE	canonical	3	396	junction_2	12	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCAAGTCTGCTTT	324	False	NA	-39	True	NA	NA	NA	19432861	19436010	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_19433349_19434735_19434895_19435637
H1_mix_00058678	chr22	+	2071	2	FSM	ENSG00000185065.6	ENST00000431090.1	2097	2	26	0	26	0	multi-exon	FALSE	canonical	2	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGTTCTTCTGAGTGGTG	471	False	NA	NA	False	AATAAA	-19	NA	19447918	19450105	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_19448326_19448441
H1_mix_00058679	chr22	+	788	1	FSM	ENSG00000273212.1	ENST00000608816.1	460	1	-365	37	-365	-37	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCAGGATTTTAAAAGTAAA	8690	False	NA	NA	False	NA	NA	NA	19456137	19456925	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_19456100_19456900
H1_mix_00058680	chr22	+	1883	19	FSM	ENSG00000093009.11	ENST00000263201.7	1879	19	-4	0	0	0	multi-exon	FALSE	canonical	3	137	junction_12	24.9945673109524	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATTGTGGCTCTGGTCTC	-6	True	NA	22	True	AATAAA	-22	NA	19479915	19520608	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_19480020_19480157_19480218_19480952_19481046_19482689_19482828_19483861_19484006_19494326_19494383_19495980_19496030_19497385_19497448_19499100_19499152_19505361_19505482_19507385_19507518_19507765_19507865_19508529_19508692_19514748_19514888_19514964_19515049_19516526_19516646_19516816_19516894_19518843_19518910_19520480
H1_mix_00058681	chr22	+	1715	18	FSM	ENSG00000093009.11	ENST00000404724.7	1693	18	-22	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	49.1922293917032	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATAAAATGCTTATTTT	-6	True	NA	-8	True	NA	NA	NA	19479915	19520578	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_19480020_19480157_19480218_19480952_19481046_19483861_19484006_19494326_19494383_19495980_19496030_19497385_19497448_19499100_19499152_19505361_19505482_19507385_19507518_19507765_19507865_19508529_19508692_19514748_19514888_19514964_19515049_19516526_19516646_19516816_19516894_19518843_19518910_19520480
H1_mix_00058683	chr22	+	2031	12	FSM	ENSG00000184702.20	ENST00000455784.7	2031	12	0	0	0	0	multi-exon	TRUE	canonical	1	15	junction_1	15.9492998369601	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCGGGTGTCCGAGTGCT	1	True	NA	34	True	NA	NA	NA	19714502	19723319	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_19714632_19714780_19714792_19719601_19719699_19719805_19719893_19720114_19720239_19720319_19720455_19720548_19720667_19720767_19720870_19721639_19721737_19721821_19721958_19722236_19722340_19722427
H1_mix_00058684	chr22	+	1088	10	FSM	ENSG00000184702.20	ENST00000412544.5	1108	10	20	0	20	0	multi-exon	FALSE	canonical	1	18	junction_1	12.7318013427833	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGAAGTATGTGGGGCG	0	True	NA	NA	False	NA	NA	NA	19714694	19722331	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_19714792_19719601_19719699_19719805_19719893_19720114_19720239_19720319_19720455_19720548_19720667_19720767_19720870_19721639_19721737_19721821_19721958_19722236
H1_mix_00058685	chr22	+	354	2	FSM	ENSG00000184702.20	ENST00000477238.1	577	2	0	223	0	-223	multi-exon	FALSE	canonical	3	56	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGCGGTGTGGGTCCCCTG	9	True	NA	NA	False	NA	NA	NA	19719529	19719990	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_19719699_19719805
H1_mix_00058687	chr22	+	873	1	FSM	ENSG00000235776.2	ENST00000424559.2	801	1	-6	-66	-6	66	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGAAAGGAAAGTGTATT	NA	False	NA	NA	False	ATTAAA	-36	NA	19792287	19793160	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_19792300_19793200
H1_mix_00058688	chr22	+	1275	6	FSM	ENSG00000093010.15	ENST00000361682.11	2272	6	51	946	-11	0	multi-exon	FALSE	canonical	3	41	junction_1	59.4191888197744	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGACTTAGTACATCCTTC	-8	True	NA	40	True	TATAAA	-34	NA	19941822	19969029	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_19941898_19961198_19961290_19962526_19962816_19963565_19963760_19964167_19964300_19968535
H1_mix_00058689	chr22	+	583	7	FSM	ENSG00000183597.16	ENST00000450664.5	570	7	-13	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	26.5418956034082	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCTTTGGGAAGCAGCT	4062	False	NA	NA	False	NA	NA	NA	20021088	20061576	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20021135_20036759_20036855_20043354_20043444_20052464_20052585_20053436_20053552_20055942_20056014_20061529
H1_mix_00058690	chr22	+	2241	8	FSM	ENSG00000183597.16	ENST00000399807.7	2241	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	22.9284601688444	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGGAATCTGTACCTGA	4062	False	NA	-37	True	NA	NA	NA	20021088	20065862	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20021135_20036759_20037095_20043354_20043444_20052464_20052585_20055942_20056014_20061529_20061684_20063337_20063443_20064541
H1_mix_00058691	chr22	+	2414	9	FSM	ENSG00000183597.16	ENST00000456048.5	2439	9	25	0	5	0	multi-exon	FALSE	canonical	3	24	junction_1	21.9797492023908	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCGAGGCCTTTCCCTTG	-14	True	NA	26	True	AATAAA	-23	NA	20021093	20065925	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20021135_20036759_20037095_20043354_20043444_20052464_20052585_20053436_20053552_20055942_20056014_20061529_20061684_20063337_20063443_20064541
H1_mix_00058692	chr22	+	1920	9	FSM	ENSG00000183597.16	ENST00000401833.5	1920	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	22.6767364274492	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTCTTGCTCTGTCACCC	10	False	NA	NA	False	NA	NA	NA	20021138	20065364	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20021247_20036759_20037095_20043354_20043444_20052464_20052585_20053436_20053552_20055942_20056014_20061529_20061684_20063337_20063443_20064541
H1_mix_00058694	chr22	+	4506	14	FSM	ENSG00000128191.16	ENST00000351989.8	4506	14	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	13.4714249409937	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAATGGCTGATGTCTTTA	9	True	NA	14	True	CATAAA	-16	NA	20080240	20111872	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20080384_20085686_20086684_20087161_20087322_20089668_20089812_20089975_20090259_20091434_20091633_20091868_20091971_20092808_20092908_20094712_20094796_20106176_20106278_20106591_20106699_20107270_20107399_20108889_20109004_20110024
H1_mix_00058695	chr22	+	2669	2	FSM	ENSG00000128191.16	ENST00000475941.1	2669	2	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCAGAGTGCCGTGTGCTT	6764	False	NA	NA	False	NA	NA	NA	20107571	20111261	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20109004_20110024
H1_mix_00058696	chr22	+	1221	6	FSM	ENSG00000099901.17	ENST00000430524.6	1221	6	0	0	0	0	multi-exon	FALSE	canonical	2	172	junction_1	3021.35320676018	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATGGCAGGACTGTGTG	0	True	NA	19	True	AATAAA	-21	NA	20116103	20127355	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20116431_20119012_20119150_20122263_20122422_20125307_20125437_20126302_20126369_20126951
H1_mix_00058697	chr22	+	699	3	FSM	ENSG00000099901.17	ENST00000488484.1	699	3	0	0	0	0	multi-exon	FALSE	canonical	3	7072	junction_2	274	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGGGACGAGGAGTGAGTG	-2	True	NA	NA	False	NA	NA	NA	20117523	20122684	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20117665_20119012_20119150_20122263
H1_mix_00058698	chr22	+	1050	6	FSM	ENSG00000099901.17	ENST00000402752.5	1132	6	80	2	-20	0	multi-exon	FALSE	canonical	3	3265	junction_5	1863.16869874953	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGATGGCAGGACTGTG	-22	True	NA	17	True	AATAAA	-19	NA	20117503	20127353	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20117665_20119012_20119150_20122263_20122422_20125307_20125437_20126302_20126369_20126954
H1_mix_00058699	chr22	+	861	6	FSM	ENSG00000099901.17	ENST00000331821.7	837	6	-24	0	0	0	multi-exon	FALSE	canonical	3	3743	junction_5	1691.42964382205	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCAGGTTGTTTTTTT	-2	True	NA	21	True	TATAAA	-12	NA	20117523	20127181	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20117665_20119012_20119150_20122263_20122422_20125307_20125437_20126302_20126369_20126951
H1_mix_00058702	chr22	+	5049	11	FSM	ENSG00000099904.16	ENST00000334554.12	5049	11	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_4	29.736173257499	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTCTACCAATGTGGT	-33	True	NA	NA	False	AATAAA	-18	NA	20131803	20148007	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20132052_20139193_20139316_20139477_20139636_20139719_20139893_20140114_20140218_20140616_20140709_20140870_20141013_20141216_20141338_20141420_20141531_20142755_20143757_20145228
H1_mix_00058703	chr22	+	3072	9	FSM	ENSG00000099904.16	ENST00000320602.11	3072	9	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	58.4870445055997	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTATTTTGATTCTTTCCT	111	False	NA	72	True	ATTAAA	-13	NA	20131947	20146450	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20132052_20139193_20139316_20139477_20139636_20140616_20140709_20140870_20141013_20141216_20141338_20141420_20141531_20142755_20143757_20145228
H1_mix_00058706	chr22	+	437	3	ISM	ENSG00000161132.6	ENST00000438948.1	1240	10	6934	3798	6934	-3798	internal_fragment	FALSE	canonical	3	17	junction_2	7	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACCTGAGCCGTTGTCTCC	6940	False	NA	NA	False	NA	NA	NA	20306693	20309418	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_+_20306826_20307785_20307962_20309289
H1_mix_00058707	chr22	+	3884	4	FSM	ENSG00000185252.19	ENST00000403682.7	2789	4	3	-1098	3	44	multi-exon	FALSE	canonical	3	60	junction_1	49.2363912388207	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTATCTATAGTTTTTAT	NA	False	NA	80	True	NA	NA	NA	20394130	20408505	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20394663_20400631_20400759_20401276_20401373_20405376
H1_mix_00058708	chr22	+	3924	5	FSM	ENSG00000185252.19	ENST00000400451.7	3900	5	-24	0	-1	0	multi-exon	FALSE	canonical	3	107	junction_1	27.9463772249642	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTACCCTCTGCTTTGT	NA	False	NA	30	True	AATAAA	-41	NA	20394126	20408455	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20394663_20395332_20395419_20400631_20400759_20401276_20401373_20405376
H1_mix_00058709	chr22	+	3702	6	FSM	ENSG00000185252.19	ENST00000611540.4	3714	6	12	0	-1	0	multi-exon	FALSE	canonical	2	6	junction_1	57.6957537432349	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCTGCTTTGTTCATGT	NA	False	NA	36	True	AATAAA	-26	NA	20394126	20408461	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20394335_20394562_20394663_20395332_20395419_20400631_20400759_20401276_20401373_20405376
H1_mix_00058710	chr22	+	3275	17	FSM	ENSG00000099917.17	ENST00000292733.11	3252	17	-23	0	-3	0	multi-exon	FALSE	canonical	3	204	junction_8	34.3599967258438	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGTGTCCCCTTCTCCA	-21	True	NA	40	True	AATAAA	-31	NA	20507578	20587632	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20507747_20537116_20537205_20551435_20551488_20553144_20553175_20554935_20555149_20564449_20564689_20566466_20566818_20568520_20568632_20582610_20582748_20582839_20582968_20583112_20583248_20583329_20583394_20584358_20584426_20584854_20585016_20585100_20585268_20585727_20585827_20586567
H1_mix_00058711	chr22	+	3370	18	FSM	ENSG00000099917.17	ENST00000263205.11	3351	18	-19	0	-3	0	multi-exon	FALSE	canonical	3	55	junction_8	79.9741740320632	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGTTGTTCATCACTGT	-9	True	NA	27	True	AATAAA	-18	NA	20507590	20587619	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20507747_20537116_20537205_20551435_20551488_20553144_20553175_20554935_20555149_20564449_20564689_20566466_20566818_20568520_20568632_20575112_20575233_20582610_20582748_20582839_20582968_20583112_20583248_20583329_20583394_20584358_20584426_20584854_20585016_20585100_20585268_20585727_20585827_20586567
H1_mix_00058712	chr22	+	3563	10	FSM	ENSG00000099917.17	ENST00000489651.5	3563	10	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	75.4671050896832	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCAGTTGTTCATCACT	2901	False	NA	25	True	AATAAA	-16	NA	20573677	20587617	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20575233_20582610_20582748_20582839_20582968_20583112_20583248_20583329_20583394_20584358_20584426_20584854_20585016_20585100_20585268_20585727_20585827_20586567
H1_mix_00058713	chr22	+	3333	9	FSM	ENSG00000099917.17	ENST00000473244.5	2733	9	-615	15	-615	0	multi-exon	FALSE	canonical	3	272	junction_4	17.612140698961	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCAGTTGTTCATCACT	NA	False	NA	25	True	AATAAA	-16	NA	20581285	20587617	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20582748_20582839_20582968_20583112_20583248_20583329_20583394_20584358_20584426_20584854_20585016_20585100_20585268_20585727_20585827_20586567
H1_mix_00058714	chr22	+	806	6	FSM	ENSG00000226287.9	ENST00000452055.5	788	6	-18	0	-18	0	multi-exon	FALSE	canonical	3	35	junction_1	15.8063278467834	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCGTGGGTTCGTCGTCTG	NA	False	NA	17	True	AATAAA	-17	NA	20702902	20704606	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20703123_20703467_20703525_20703632_20703752_20703967_20704041_20704187_20704229_20704310
H1_mix_00058715	chr22	+	465	4	FSM	ENSG00000226287.9	ENST00000422715.1	471	4	0	6	0	-6	multi-exon	FALSE	canonical	3	35	junction_1	19.7371617907833	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCAGGGCGGTGGGCGC	153	False	NA	NA	False	NA	NA	NA	20703094	20704228	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20703123_20703467_20703525_20703632_20703752_20703967
H1_mix_00058716	chr22	+	4271	5	FSM	ENSG00000099940.12	ENST00000215730.12	4259	5	-15	3	-15	-3	multi-exon	FALSE	canonical	3	260	junction_2	17.2391270080593	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTCTCTTTAACCTCTT	15	False	NA	6	True	AATAAA	-16	NA	20858991	20891211	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20859348_20870336_20870534_20881048_20881135_20883470_20883570_20887678
H1_mix_00058717	chr22	+	5356	3	FSM	ENSG00000099942.13	ENST00000354336.8	5342	3	-14	0	-14	0	multi-exon	FALSE	canonical	3	579	junction_1	29	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCGGTGTTTCAGTGTCT	6247	False	NA	23	True	AATAAA	-27	NA	20917392	20953747	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20918246_20933778_20934245_20949710
H1_mix_00058718	chr22	+	498	2	FSM	ENSG00000237476.1	ENST00000444039.1	684	2	101	85	101	-85	multi-exon	FALSE	canonical	3	15	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCACTGTGATTTCTGGA	8	False	NA	-76	True	NA	NA	NA	20957192	20964594	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20957487_20964390
H1_mix_00058719	chr22	+	872	8	FSM	ENSG00000099949.21	ENST00000414985.5	872	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	36.7673324391895	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTACGGGCATACCATGGT	0	True	NA	NA	False	GGGGCT	-21	NA	20982268	20991685	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20982572_20983026_20983090_20985840_20985898_20988009_20988119_20988788_20988873_20989624_20989683_20990385_20990526_20991627
H1_mix_00058721	chr22	+	4222	21	FSM	ENSG00000099949.21	ENST00000646124.2	4282	21	0	60	0	0	multi-exon	FALSE	canonical	2	68	junction_18	15.947648729515	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTGATCTAGACTTATAT	-13	True	NA	-27	True	NA	NA	NA	20982296	20998972	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20982572_20983026_20983090_20985840_20985898_20987503_20987584_20988009_20988119_20988788_20988873_20989624_20989683_20990385_20990526_20991627_20991830_20992213_20992370_20992793_20992905_20993661_20993755_20993923_20994020_20994103_20994270_20994557_20994728_20994869_20995027_20995745_20995873_20995962_20996113_20996695_20996802_20996885_20996967_20997231
H1_mix_00058723	chr22	+	4058	16	FSM	ENSG00000099949.21	ENST00000646506.1	4058	16	0	0	0	0	multi-exon	FALSE	canonical	2	68	junction_13	13.5787415551745	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCCCTAAAAAGCAAATTTT	525	False	NA	17	True	AATAAA	-18	NA	20988030	20999016	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20988119_20988788_20988873_20989624_20989683_20990385_20990526_20991627_20991830_20992213_20992370_20992793_20992905_20993661_20993755_20993923_20994020_20994103_20994728_20994869_20995027_20995745_20995873_20995962_20996113_20996695_20996802_20996885_20996967_20997231
H1_mix_00058724	chr22	+	4363	11	FSM	ENSG00000099949.21	ENST00000495142.6	4499	11	136	0	-108	0	multi-exon	FALSE	canonical	2	68	junction_8	16.1294761229248	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTGATCTAGACTTATAT	4122	False	NA	-27	True	NA	NA	NA	20991627	20998972	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20991830_20992213_20992370_20992793_20992905_20993661_20993755_20993923_20994020_20994103_20994728_20994869_20995873_20995962_20996113_20996695_20996802_20996885_20996967_20997231
H1_mix_00058726	chr22	+	3505	4	FSM	ENSG00000099949.21	ENST00000463909.1	3505	4	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	4.78423336480244	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACGAAATTGTGTGGCA	7583	False	NA	33	True	AATAAA	-34	NA	20995088	20999032	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20995873_20995962_20996802_20996885_20996967_20997231
H1_mix_00058728	chr22	+	1720	2	FSM	ENSG00000230513.3	ENST00000436079.1	1720	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGGGAGTTGGGCCCTC	NA	False	NA	NA	False	NA	NA	NA	21001885	21010125	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_21002830_21009349
H1_mix_00058729	chr22	+	1263	2	FSM	ENSG00000230513.3	ENST00000429962.2	1269	2	0	6	0	5	multi-exon	FALSE	canonical	3	18	junction_1	0	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAGAATTGCTTCTATA	NA	False	NA	24	True	ATTAAA	-33	NA	21001921	21003272	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_21002830_21002917
H1_mix_00058730	chr22	+	2298	2	FSM	ENSG00000230513.3	ENST00000452284.1	2298	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCTGAAATAAGCCTGT	4	True	NA	-27	True	NA	NA	NA	21002207	21010342	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_21002830_21008666
H1_mix_00058731	chr22	+	596	1	ISM	ENSG00000169668.12	ENST00000691409.1	2143	5	18678	8	3093	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACGACTTGCGTGCATG	NA	False	NA	NA	False	NA	NA	NA	21121682	21122278	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_+_21121700_21122300
H1_mix_00058733	chr22	+	6834	3	FSM	ENSG00000169635.10	ENST00000407464.7	6831	3	-3	0	-3	0	multi-exon	FALSE	canonical	3	18	junction_2	32.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGTGGGACCTCCAT	-3	True	NA	24	True	ATTAAA	-15	NA	21417367	21451463	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_21417561_21442758_21442858_21444921
H1_mix_00058734	chr22	+	2822	3	FSM	ENSG00000185651.15	ENST00000545681.2	2932	3	110	0	-57	0	multi-exon	FALSE	canonical	3	46	junction_1	1376	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTAGTCGTGTGGGTTTCTT	NA	False	NA	16	True	AATAAA	-18	NA	21567656	21624034	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_21567772_21610856_21611044_21621514
H1_mix_00058735	chr22	+	3528	4	FSM	ENSG00000185651.15	ENST00000496722.1	3451	4	-73	-4	-57	4	multi-exon	FALSE	canonical	3	15	junction_1	1262.23250191432	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGTGTGGGTTTCTTCCTT	NA	False	NA	20	True	AATAAA	-22	NA	21567656	21624038	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_21568378_21592860_21592957_21610856_21611044_21621514
H1_mix_00058736	chr22	+	2861	4	FSM	ENSG00000185651.15	ENST00000342192.9	2861	4	0	0	0	0	multi-exon	FALSE	canonical	3	2320	junction_1	195.254250202709	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTAGTCGTGTGGGTTTCTT	0	True	NA	16	True	AATAAA	-18	NA	21567713	21624034	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_21567772_21592860_21592957_21610856_21611044_21621514
H1_mix_00058737	chr22	+	825	3	FSM	ENSG00000128228.5	ENST00000248958.5	825	3	0	0	0	0	multi-exon	FALSE	canonical	3	849	junction_1	64	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCGTTTCACTGTGAGCCT	-18	True	NA	29	True	ATTAAA	-17	NA	21642301	21644299	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_21642524_21642861_21643059_21643893
H1_mix_00058738	chr22	+	601	2	FSM	ENSG00000128228.5	ENST00000466935.1	601	2	0	0	0	0	multi-exon	FALSE	canonical	3	849	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATAGCTCTTCCTCTGGTGG	34	False	NA	NA	False	NA	NA	NA	21642353	21643292	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_21642524_21642861
H1_mix_00058741	chr22	+	4178	20	FSM	ENSG00000100023.20	ENST00000681956.1	4168	20	-10	0	-10	0	multi-exon	FALSE	canonical	3	133	junction_19	26.8978780738434	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCACATTCCTACAGCAAAT	8226	False	NA	111	True	TATAAA	-29	NA	21665989	21697995	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_21666132_21669912_21669963_21670565_21670612_21670996_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688107_21688731_21688850_21693815_21693873_21694592_21694666_21694754_21694818_21694936_21695071_21695393
H1_mix_00058742	chr22	+	3035	21	FSM	ENSG00000100023.20	ENST00000681338.1	3025	21	-10	0	-10	0	multi-exon	FALSE	canonical	2	11	junction_19	58.0915441350977	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTAGGAATTTAAGAGGG	8226	False	NA	NA	False	AATAGA	-16	NA	21665989	21698106	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_21666132_21669912_21669963_21670565_21670612_21670996_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688107_21688731_21688850_21693815_21693873_21694592_21694666_21694754_21694818_21694936_21695071_21695397_21695497_21696746
H1_mix_00058744	chr22	+	4061	21	FSM	ENSG00000100023.20	ENST00000679795.1	4051	21	-10	0	-10	0	multi-exon	FALSE	canonical	3	22	junction_20	45.6317871664041	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGGTATAAATTACAAAAAAA	8226	False	NA	NA	False	GATAAA	-9	NA	21665989	21698248	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_21666132_21669912_21669963_21670565_21670612_21670996_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688107_21688731_21688850_21693815_21693873_21694592_21694666_21694754_21694818_21694936_21695071_21695393_21695497_21695866
H1_mix_00058745	chr22	+	4948	21	FSM	ENSG00000100023.20	ENST00000335025.12	4929	21	-19	0	-10	0	multi-exon	FALSE	canonical	3	25	junction_20	45.09819841191	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCAATTTAGAGTGTATC	8226	False	NA	NA	False	AATAAA	-20	NA	21665989	21700015	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_21666132_21669912_21669963_21670565_21670612_21670996_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688107_21688731_21688850_21693815_21693873_21694592_21694666_21694754_21694818_21694936_21695071_21695393_21695497_21696746
H1_mix_00058746	chr22	+	4132	21	NIC	ENSG00000100023.20	novel	2625	21	NA	NA	0	0	intron_retention	FALSE	canonical	2	11	junction_2	69.1306552840344	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTATTTTCAATTCTAAT	-3	True	NA	23	True	ATTAAA	-15	NA	21666021	21697907	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_21666132_21669912_21669963_21670298_21670377_21670565_21670612_21670996_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688107_21688731_21688850_21693815_21693873_21694592_21694666_21694754_21694818_21694936_21695071_21695397
H1_mix_00058747	chr22	+	5354	1	FSM	ENSG00000279278.1	ENST00000624350.1	8420	1	-961	4027	-961	-4027	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCGTTTGGCAGGGGAA	NA	False	NA	NA	False	NA	NA	NA	22263639	22268993	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_22263600_22269000
H1_mix_00058748	chr22	+	4468	7	Fusion	ENSG00000211643.2_ENSG00000272779.1	novel	1121	8	NA	NA	-5143	577	intron_retention	FALSE	canonical	3	69	junction_6	198.473689832067	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCTTGTTGCCCAGGCT	NA	False	NA	NA	False	NA	NA	NA	22298080	22319803	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr22_+_22298212_22303223_22303298_22303942_22304115_22306789_22307022_22307105_22309884_22310225_22310402_22318898
H1_mix_00058749	chr22	+	4425	7	Fusion	ENSG00000211643.2_ENSG00000272779.1	novel	1121	8	NA	NA	-5143	577	intron_retention	FALSE	canonical	3	69	junction_6	202.265021417172	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCTTGTTGCCCAGGCT	NA	False	NA	NA	False	NA	NA	NA	22298080	22319803	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr22_+_22298212_22303223_22303298_22303942_22304115_22306832_22307022_22307105_22309884_22310225_22310402_22318898
H1_mix_00058750	chr22	+	338	2	ISM	ENSG00000100121.14	ENST00000652467.1	538	3	398	61	398	-61	3prime_fragment	FALSE	canonical	3	42	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGCTTCCCCTGTGAGCA	NA	False	NA	NA	False	NA	NA	NA	22647175	22647817	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_+_22647291_22647594
H1_mix_00058751	chr22	+	3170	3	FSM	ENSG00000128266.9	ENST00000615612.2	3170	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	6.5	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGCATTGTCCCAGTGT	-6	True	NA	29	True	AATAAA	-15	NA	23070518	23125032	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23070571_23095246_23096419_23123086
H1_mix_00058752	chr22	+	4939	11	FSM	ENSG00000100228.14	ENST00000263116.8	4990	11	-12	63	-12	-63	multi-exon	TRUE	canonical	2	5	junction_9	3.6	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGTAACAAATCACTCCAA	-28	True	NA	NA	False	NA	NA	NA	23145464	23165600	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23145552_23146604_23146686_23150062_23150155_23152460_23152527_23153032_23153135_23155967_23156033_23157991_23158044_23158897_23158980_23159162_23159254_23160878_23160999_23161499
H1_mix_00058753	chr22	+	4708	22	FSM	ENSG00000186716.21	ENST00000359540.7	4708	22	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_15	108.480475687758	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTGGGGGCCGTGGCCC	NA	False	NA	26	True	AATAAA	-14	NA	23180364	23315950	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23182240_23253798_23253981_23260949_23261055_23261354_23261541_23268407_23268516_23271531_23271593_23273080_23273134_23273633_23273775_23283976_23284099_23285032_23285202_23287158_23287279_23288096_23288173_23289516_23289622_23290338_23290414_23292540_23292639_23309423_23309484_23310323_23310434_23311696_23311837_23312886_23313022_23313967_23314074_23314551_23314715_23315432
H1_mix_00058754	chr22	+	6783	23	FSM	ENSG00000186716.21	ENST00000305877.13	6783	23	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_2	46.3179810861919	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCGTGCATGTTGACTTC	-17	True	NA	NA	False	ATTAAA	-17	NA	23180508	23318037	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23182240_23253798_23253981_23260949_23261055_23261354_23261541_23268407_23268516_23271531_23271593_23273080_23273134_23273633_23273775_23283976_23284099_23285032_23285202_23287158_23287279_23288096_23288173_23289516_23289622_23290338_23290414_23292540_23292639_23295023_23295156_23309423_23309484_23310323_23310434_23311696_23311837_23312886_23313022_23313967_23314074_23314551_23314715_23315432
H1_mix_00058756	chr22	+	543	1	FSM	ENSG00000227755.1	ENST00000426024.1	163	1	4	-384	4	62	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCAGGCATTTCCGCT	NA	False	NA	NA	False	NA	NA	NA	23460352	23460895	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23460400_23460900
H1_mix_00058757	chr22	+	9293	2	FSM	ENSG00000280623.1	ENST00000629869.1	976	2	0	-8317	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCCTTTCTTTATACT	5	True	NA	10	True	NA	NA	NA	23536880	23547797	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23537137_23538760
H1_mix_00058758	chr22	+	10924	1	FSM	ENSG00000280623.1	ENST00000627127.1	3935	1	-6982	-7	0	7	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTTTATACTCTTATTT	5	True	NA	17	True	NA	NA	NA	23536880	23547804	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23536900_23547800
H1_mix_00058759	chr22	+	3922	3	ISM	ENSG00000280623.1	ENST00000626825.1	1077	4	-31	-635	-13	5	intron_retention	FALSE	canonical	2	13	junction_2	14	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTCTTTATACTCTTAT	9419	False	NA	15	True	NA	NA	NA	23536867	23547802	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_+_23537137_23538760_23538839_23544227
H1_mix_00058762	chr22	+	2308	8	FSM	ENSG00000099953.10	ENST00000215743.8	2261	8	-47	0	-44	0	multi-exon	TRUE	canonical	3	32	junction_1	9.46960766810089	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGCTTGGTCTCCTT	NA	False	NA	15	True	ATTAAA	-16	NA	23772801	23784316	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23772979_23779186_23779417_23780358_23780503_23780581_23780716_23780858_23781101_23781192_23781410_23782225_23782484_23783410
H1_mix_00058763	chr22	+	1720	9	FSM	ENSG00000099956.20	ENST00000344921.11	1717	9	-3	0	-3	0	multi-exon	FALSE	canonical	0	0	junction_4	599.383016109065	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCTTCAACAGGTCATG	-23	True	NA	18	True	AATAAA	-19	NA	23786959	23834505	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23787263_23791755_23791868_23793558_23793689_23800943_23801136_23803294_23803423_23816769_23816937_23825224_23825416_23833571_23833704_23834140
H1_mix_00058764	chr22	+	1730	9	FSM	ENSG00000099956.20	ENST00000407422.8	1730	9	0	0	0	0	multi-exon	FALSE	canonical	3	1419	junction_5	182.281333040441	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTTTAACATAAAAATAATG	NA	False	NA	53	True	NA	NA	NA	23786930	23834540	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23787263_23791755_23791868_23793558_23793689_23800943_23801082_23803294_23803423_23816769_23816937_23825224_23825416_23833571_23833704_23834140
H1_mix_00058765	chr22	+	5488	9	FSM	ENSG00000099956.20	ENST00000644036.2	5191	9	-123	-174	-88	174	multi-exon	TRUE	canonical	3	308	junction_2	502.716853084318	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTAGCCCTGACCCCTGCA	NA	False	NA	NA	False	NA	NA	NA	23786842	23838183	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23787263_23791755_23791895_23793558_23793689_23800943_23801082_23803294_23803423_23816769_23816937_23825224_23825416_23833571_23833704_23834140
H1_mix_00058767	chr22	+	2649	3	FSM	ENSG00000099956.20	ENST00000645799.1	2653	3	4	0	4	0	multi-exon	FALSE	canonical	3	1813	junction_2	7	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAGTCCTGCCCCCCAC	111	False	NA	-63	True	GGGGCT	-39	NA	23823111	23834353	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23825416_23833571_23833704_23834140
H1_mix_00058768	chr22	+	942	7	NIC	ENSG00000133460.20	novel	1203	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	9.25112605758528	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTATGGTGTTAAAATGCA	-4	True	NA	25	True	ATTAAA	-16	NA	23856946	23882952	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_23856992_23862103_23862203_23868480_23868642_23875116_23875242_23877041_23877172_23882458_23882647_23882758
H1_mix_00058769	chr22	+	557	3	FSM	ENSG00000240972.2	ENST00000215754.8	557	3	0	0	0	0	multi-exon	FALSE	canonical	3	21305	junction_2	1533.5	3879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTGCCTCGGGGTTCCTT	-22	True	NA	20	True	AATAAA	-15	NA	23894382	23895223	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23894583_23894771_23894945_23895039
H1_mix_00058770	chr22	+	679	2	FSM	ENSG00000240972.2	ENST00000498385.1	435	2	-248	4	0	0	multi-exon	FALSE	canonical	3	21305	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTGCCTCGGGGTTCCTT	9	False	NA	20	True	AATAAA	-15	NA	23894449	23895223	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23894945_23895039
H1_mix_00058771	chr22	+	1904	3	FSM	ENSG00000099974.8	ENST00000215770.6	1582	3	0	-322	0	322	multi-exon	FALSE	canonical	2	3	junction_2	248	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACACCACCATGTCCGGT	-8	True	NA	NA	False	NA	NA	NA	23966887	23972878	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23967023_23967385_23967562_23971285
H1_mix_00058772	chr22	+	510	2	ISM	ENSG00000099974.8	ENST00000215770.6	1582	3	0	4796	0	-4796	5prime_fragment	FALSE	canonical	3	499	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTCCTCAGTGTGTAAG	-8	True	NA	NA	False	AATGAA	-9	NA	23966887	23967760	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_+_23967023_23967385
H1_mix_00058773	chr22	+	1194	9	FSM	ENSG00000099991.18	ENST00000454754.5	1321	9	127	0	4	0	multi-exon	FALSE	canonical	3	8	junction_4	12.3129758791285	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAGAGAAAGTAGA	11	True	NA	NA	False	NA	NA	NA	24011318	24056304	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_24011368_24035443_24035521_24036088_24036182_24038347_24038462_24042903_24043085_24049090_24049221_24050824_24050975_24054872_24055160_24056191
H1_mix_00058774	chr22	+	7219	37	FSM	ENSG00000099991.18	ENST00000263119.10	7233	37	14	0	3	0	multi-exon	FALSE	canonical	2	10	junction_25	9.59307073740413	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGCCTCTTTGCTCAC	10	True	NA	13	True	AATAAA	-13	NA	24011317	24178628	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_24011368_24035443_24035521_24036088_24036182_24038347_24038462_24041138_24041274_24042903_24043085_24049090_24049221_24050824_24050975_24054872_24055160_24056191_24056361_24059226_24059364_24059923_24060142_24061946_24062026_24062958_24063147_24064034_24064188_24066986_24067182_24070799_24071043_24072353_24072511_24076168_24076285_24083227_24083390_24084578_24084786_24085005_24085152_24087451_24087714_24091582_24091844_24095930_24096083_24098013_24098193_24113565_24113749_24119366_24119699_24134301_24134416_24164399_24164564_24165529_24165627_24166638_24167314_24168446_24168522_24171712_24171996_24176110_24176276_24177503_24177818_24178052
H1_mix_00058775	chr22	+	7068	36	FSM	ENSG00000099991.18	ENST00000617531.4	7072	36	4	0	4	0	multi-exon	FALSE	canonical	2	2	junction_7	10.88402686584	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGCCTCTTTGCTCAC	11	True	NA	13	True	AATAAA	-13	NA	24011318	24178628	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_24011368_24035443_24035521_24036088_24036182_24038347_24038462_24041138_24041274_24042903_24043085_24049090_24049221_24054872_24055160_24056191_24056361_24059226_24059364_24059923_24060142_24061946_24062026_24062958_24063147_24064034_24064188_24066986_24067182_24070799_24071043_24072353_24072511_24076168_24076285_24083227_24083390_24084578_24084786_24085005_24085152_24087451_24087714_24091582_24091844_24095930_24096083_24098013_24098193_24113565_24113749_24119366_24119699_24134301_24134416_24164399_24164564_24165529_24165627_24166638_24167314_24168446_24168522_24171712_24171996_24176110_24176276_24177503_24177818_24178052
H1_mix_00058776	chr22	+	7550	37	FSM	ENSG00000099991.18	ENST00000398319.6	7480	37	-70	0	0	0	multi-exon	FALSE	canonical	2	10	junction_25	9.3348213099603	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGCCTCTTTGCTCAC	-3	True	NA	13	True	AATAAA	-13	NA	24011347	24178628	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_24011729_24035443_24035521_24036088_24036182_24038347_24038462_24041138_24041274_24042903_24043085_24049090_24049221_24050824_24050975_24054872_24055160_24056191_24056361_24059226_24059364_24059923_24060142_24061946_24062026_24062958_24063147_24064034_24064188_24066986_24067182_24070799_24071043_24072353_24072511_24076168_24076285_24083227_24083390_24084578_24084786_24085005_24085152_24087451_24087714_24091582_24091844_24095930_24096083_24098013_24098193_24113565_24113749_24119366_24119699_24134301_24134416_24164399_24164564_24165529_24165627_24166638_24167314_24168446_24168522_24171712_24171996_24176110_24176276_24177503_24177818_24178052
H1_mix_00058778	chr22	+	2471	9	NIC	ENSG00000099991.18	novel	2422	8	NA	NA	117	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	15.9687194226713	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGCCTCTTTGCTCAC	15	False	NA	13	True	AATAAA	-13	NA	24155954	24178628	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_24156077_24164399_24164564_24165529_24165627_24166638_24167314_24168446_24168522_24171712_24171996_24176110_24176276_24177503_24177818_24178052
H1_mix_00058780	chr22	+	3172	15	FSM	ENSG00000099994.11	ENST00000358321.4	3172	15	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_13	3.63444406663101	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCTCCTGGTGTTCAT	0	True	NA	12	True	AAAACA	-18	NA	24181486	24189106	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_24181596_24183056_24183268_24183494_24183647_24184135_24184304_24184765_24184941_24185093_24185296_24185485_24185572_24185660_24185930_24186015_24186160_24186256_24186416_24187201_24187451_24187570_24187844_24187958_24188136_24188224_24188328_24188411
H1_mix_00058781	chr22	+	6688	16	FSM	ENSG00000100014.20	ENST00000437398.5	6674	16	-14	0	-14	0	multi-exon	FALSE	canonical	3	200	junction_1	26.0856708217792	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTTTTTTGTTGGTTTTT	-49	True	NA	27	True	GATAAA	-16	NA	24270802	24417739	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_24270984_24302194_24302385_24313312_24313467_24321287_24322919_24324219_24324428_24328845_24328920_24330255_24330432_24334409_24334574_24338385_24338478_24347085_24347177_24363260_24363345_24365475_24365633_24369217_24369321_24411587_24411705_24412647_24412708_24414533
H1_mix_00058782	chr22	+	6782	17	FSM	ENSG00000100014.20	ENST00000314328.14	6763	17	-19	0	-5	0	multi-exon	FALSE	canonical	3	86	junction_2	61.5522834162145	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTTTTTTGTTGGTTTT	-40	True	NA	26	True	GATAAA	-15	NA	24270811	24417738	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_24270984_24276699_24276804_24302194_24302385_24313312_24313467_24321287_24322919_24324219_24324428_24328845_24328920_24330255_24330432_24334409_24334574_24338385_24338478_24347085_24347177_24363260_24363345_24365475_24365633_24369217_24369321_24411587_24411705_24412647_24412708_24414533
H1_mix_00058786	chr22	+	5012	16	NIC	ENSG00000100014.20	novel	6763	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_4	61.5090237282303	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTTTTTTGTTGGTTTT	31	True	NA	26	True	GATAAA	-15	NA	24270882	24417738	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_24270984_24302194_24302385_24313312_24313467_24321287_24321324_24324219_24324428_24328845_24328920_24330255_24330432_24334409_24334574_24338385_24338478_24347085_24347177_24363260_24363345_24365475_24365633_24369217_24369321_24411587_24411705_24412647_24412708_24414533
H1_mix_00058787	chr22	+	2712	3	NIC	ENSG00000128271.22	novel	926	2	NA	NA	-1	3	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	3	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGTCTGAGTTCGTTTCC	-2	True	NA	33	True	AATAAA	-40	NA	24423629	24442360	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_24423958_24433130_24433737_24440582
H1_mix_00058788	chr22	+	3466	4	FSM	ENSG00000100028.12	ENST00000215829.8	3466	4	0	0	0	0	multi-exon	FALSE	canonical	3	2240	junction_1	39.1606378338703	417	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAGTGTCATAGTGATCA	2	True	NA	18	True	ATTAAA	-14	NA	24555998	24574971	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_24556072_24557656_24557801_24567983_24568177_24571915
H1_mix_00058789	chr22	+	2651	16	FSM	ENSG00000100031.19	ENST00000400382.6	2630	16	-21	0	-12	0	multi-exon	FALSE	canonical	3	27	junction_1	24.9849732617205	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCACTCTCTGGGCCTCA	0	True	NA	25	True	AATAAA	-44	NA	24603171	24628996	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_24603528_24607953_24608024_24609964_24610034_24610249_24610532_24611074_24611246_24614775_24614907_24615040_24615128_24620327_24620521_24620912_24621071_24623106_24623257_24623779_24623917_24627431_24627620_24627851_24627980_24628080_24628194_24628274_24628389_24628692
H1_mix_00058790	chr22	+	2296	16	NIC	ENSG00000100031.19	novel	2540	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	27.6884251789243	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCACTCTCTGGGCCTCA	11	True	NA	25	True	AATAAA	-44	NA	24603212	24628996	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_24603322_24607953_24608024_24609964_24610034_24610357_24610532_24611074_24611246_24614775_24614907_24615040_24615128_24620327_24620521_24620912_24621071_24623106_24623257_24623779_24623917_24627431_24627620_24627851_24627980_24628080_24628194_24628274_24628389_24628692
H1_mix_00058792	chr22	+	279	2	FSM	ENSG00000284128.1	ENST00000611425.1	778	2	499	0	-48	0	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGAGGTCATGTCTCAGG	NA	False	NA	NA	False	NA	NA	NA	24648197	24650003	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_24648333_24649859
H1_mix_00058793	chr22	+	1194	11	ISM	ENSG00000167037.19	ENST00000400359.4	4317	26	-78	56647	30	54298	5prime_fragment	FALSE	canonical	3	9	junction_4	5.32541078227774	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCACATGGGCAGTTGG	-2	True	NA	NA	False	NA	NA	NA	24806240	24868490	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_+_24806345_24806440_24806485_24844896_24844973_24847633_24847797_24850279_24850433_24854995_24855064_24855284_24855431_24855548_24855681_24859715_24859841_24867092_24867161_24868375
H1_mix_00058794	chr22	+	347	3	NIC	ENSG00000167037.19	novel	344	4	NA	NA	14	-1	combination_of_known_splicesites	FALSE	canonical	3	14	junction_2	5.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTTTGGAGTGCCTTCA	10	False	NA	11	True	ATTAAA	-16	NA	24806224	24814191	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_24806345_24806440_24806485_24814008
H1_mix_00058795	chr22	+	4793	14	ISM	ENSG00000167037.19	ENST00000480523.1	3694	23	23885	-2253	23885	2	3prime_fragment	FALSE	canonical	2	10	junction_1	2.02060392870211	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTTTTTTTGTCTTTT	NA	False	NA	17	True	TATAAA	-17	NA	24868625	24926846	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_+_24868856_24876576_24876716_24879461_24879527_24884052_24884199_24886599_24886729_24893430_24893614_24895222_24895292_24897971_24898560_24901832_24901958_24905104_24905188_24912642_24912753_24917657_24917755_24919825_24919994_24924185
H1_mix_00058796	chr22	+	10614	12	NIC	ENSG00000197077.14	novel	10732	13	NA	NA	-34	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	15.1537574098427	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGTGCGTCCATGTGTGA	11	True	NA	19	True	AATAAA	-27	NA	24952681	25197448	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_24952773_25027944_25029541_25032608_25032697_25038759_25041526_25049229_25049365_25170819_25170939_25174239_25174490_25177347_25177523_25181698_25181824_25184976_25185120_25190701_25190785_25192405
H1_mix_00058797	chr22	+	10874	14	NNC	ENSG00000197077.14	novel	7864	14	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	14.2799565742797	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGTGCGTCCATGTGTGA	-21	True	NA	19	True	AATAAA	-27	NA	24952706	25197448	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_24952773_25014433_25014567_25025632_25025785_25027944_25029541_25032608_25032697_25038759_25041526_25049229_25049365_25170819_25170939_25174239_25174490_25177347_25177523_25181698_25181824_25184976_25185120_25190701_25190785_25192405
H1_mix_00058798	chr22	+	10736	13	FSM	ENSG00000197077.14	ENST00000358431.8	10732	13	-4	0	-4	0	multi-exon	FALSE	canonical	3	10	junction_1	13.7254831932755	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGTGCGTCCATGTGTGA	-16	True	NA	19	True	AATAAA	-27	NA	24952711	25197448	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_24952773_25025632_25025785_25027944_25029541_25032608_25032697_25038759_25041526_25049229_25049365_25170819_25170939_25174239_25174490_25177347_25177523_25181698_25181824_25184976_25185120_25190701_25190785_25192405
H1_mix_00058799	chr22	+	1376	5	FSM	ENSG00000100058.13	ENST00000382734.10	1389	5	9	4	2	-4	multi-exon	FALSE	canonical	3	153	junction_1	31.6889176211495	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATTGATTCTTCAATCAA	-26	True	NA	45	True	AATAAA	-20	NA	25448088	25461674	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_25448285_25455711_25455841_25457258_25457402_25459415_25459516_25460866
H1_mix_00058800	chr22	+	2598	3	NIC	ENSG00000100058.13	novel	724	4	NA	NA	2	-4	intron_retention	FALSE	canonical	3	34	junction_1	100.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATTGATTCTTCAATCAA	-26	True	NA	45	True	AATAAA	-20	NA	25448088	25461674	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_25448285_25457258_25457402_25459415
H1_mix_00058801	chr22	+	1473	6	NNC	ENSG00000100058.13	novel	1389	5	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	81	junction_1	61.9883860089937	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTCTCCATTGATTCTTC	-10	True	NA	39	True	AATAAA	-14	NA	25448104	25461668	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_25448285_25453315_25453435_25455711_25455841_25457258_25457402_25459415_25459516_25460866
H1_mix_00058802	chr22	+	712	4	FSM	ENSG00000100058.13	ENST00000415709.6	724	4	8	4	8	-4	multi-exon	FALSE	canonical	3	153	junction_1	33.5956346370576	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTCTGCTGTGGGTCTTT	-8	True	NA	NA	False	AATGAA	-14	NA	25448106	25459677	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_25448285_25455711_25455841_25457258_25457402_25459415
H1_mix_00058803	chr22	+	538	3	ISM	ENSG00000100058.13	ENST00000415709.6	724	4	7613	0	-6	0	3prime_fragment	FALSE	canonical	3	200	junction_1	17.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGTGGGTCTTTGATC	7533	False	NA	NA	False	AATGAA	-18	NA	25455711	25459681	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_+_25455841_25457258_25457402_25459415
H1_mix_00058804	chr22	+	5086	1	FSM	ENSG00000272977.1	ENST00000609475.1	3754	1	-1378	46	-1378	-46	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCACATTGATGGACTCT	4286	False	NA	-9	True	AATAAA	-3	NA	25474839	25479925	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_25474800_25479900
H1_mix_00058805	chr22	+	9321	21	FSM	ENSG00000100077.16	ENST00000324198.11	9277	21	-44	0	-44	0	multi-exon	FALSE	canonical	3	47	junction_19	10.6596200682764	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCGACTTCCGTGTGCTGT	-28	True	NA	21	True	AATAAA	-18	NA	25564630	25729294	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_25565154_25604376_25604454_25644591_25644666_25661575_25661678_25663629_25663705_25667738_25667801_25672295_25672348_25674436_25674529_25678815_25678916_25685169_25685249_25687536_25687668_25690188_25690284_25695106_25695215_25703509_25703577_25704108_25704210_25709897_25709965_25711067_25711164_25714407_25714571_25718244_25718382_25721283_25721398_25722288
H1_mix_00058806	chr22	+	9056	20	NIC	ENSG00000100077.16	novel	9277	21	NA	NA	144	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	17.5096332805039	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCGACTTCCGTGTGCTGT	110	False	NA	21	True	AATAAA	-18	NA	25564818	25729294	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_25565154_25644591_25644666_25661575_25661678_25663629_25663705_25667738_25667801_25672295_25672348_25674436_25674529_25678815_25678916_25685169_25685249_25687536_25687668_25690188_25690284_25695106_25695215_25703509_25703577_25704108_25704210_25709897_25709965_25711067_25711164_25714407_25714571_25718244_25718382_25721283_25721398_25722288
H1_mix_00058807	chr22	+	6773	17	FSM	ENSG00000100095.19	ENST00000248933.11	6584	17	-189	0	-189	0	multi-exon	FALSE	canonical	2	5	junction_14	4.93077073082901	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTGTGTAGAATTTTT	120	False	NA	18	True	AATAAA	-15	NA	26169272	26383596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_26169764_26292405_26293147_26294291_26294426_26296887_26297081_26298983_26299170_26305978_26306145_26310669_26310837_26311767_26311963_26313763_26313903_26340435_26340633_26347718_26347914_26351051_26351244_26365371_26365567_26373450_26373484_26375574_26375690_26377672_26377776_26380265
H1_mix_00058808	chr22	+	6307	15	FSM	ENSG00000100095.19	ENST00000360929.7	6307	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	6.93004402612867	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTGTGTAGAATTTTT	25	False	NA	18	True	AATAAA	-15	NA	26169513	26383596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_26169764_26292405_26293147_26294291_26294426_26296887_26297081_26298983_26299170_26305978_26306145_26310669_26310837_26311767_26311963_26313763_26313903_26340435_26340633_26347718_26347914_26365371_26365567_26375574_26375690_26377672_26377776_26380265
H1_mix_00058809	chr22	+	3215	16	FSM	ENSG00000100095.19	ENST00000629590.2	3215	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_13	5.40370243444252	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGATTGAAACCCCAGAAT	86	False	NA	-65	True	NA	NA	NA	26169574	26380373	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_26169764_26292405_26293147_26294291_26294426_26296887_26297081_26298983_26299170_26305978_26306145_26310669_26310837_26311767_26311963_26313763_26313903_26340435_26340633_26347718_26347914_26351051_26351244_26365371_26365567_26375574_26375690_26377672_26377776_26380265
H1_mix_00058810	chr22	+	827	2	NNC	ENSG00000128203.7	novel	3370	4	NA	NA	13	-14348	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTCTTTTATTGTCAT	-9	True	NA	6	True	AATAAA	-20	NA	26429272	26430667	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_26429487_26430054
H1_mix_00058811	chr22	+	3373	4	FSM	ENSG00000128203.7	ENST00000215906.6	3370	4	-3	0	-3	0	multi-exon	FALSE	canonical	3	90	junction_1	7.48331477354788	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGTGGTGAGGTCATCT	-25	True	NA	11	True	AATAAA	-21	NA	26429256	26445015	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_26429487_26433391_26434502_26442458_26442573_26443096
H1_mix_00058812	chr22	+	1178	8	NNC	ENSG00000100104.13	novel	4020	7	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	207	junction_1	21.5964849747663	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATTCCTGCCCTACGTG	-19	True	NA	-78	True	NA	NA	NA	26483871	26491832	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_26483984_26484004_26484100_26486022_26486064_26488028_26488289_26488389_26488489_26490043_26490199_26491024_26491071_26491462
H1_mix_00058813	chr22	+	4030	7	FSM	ENSG00000100104.13	ENST00000215917.11	4020	7	-10	0	-10	0	multi-exon	FALSE	canonical	3	214	junction_6	20.5236990384829	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGACCTAACTCATTCCTA	-24	True	NA	7	True	AATAAA	-17	NA	26483866	26494658	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_26484100_26486022_26486064_26488028_26488289_26488389_26488489_26490043_26490199_26491024_26491071_26491462
H1_mix_00058814	chr22	+	1653	2	FSM	ENSG00000261188.2	ENST00000565764.2	1663	2	4	6	4	-6	multi-exon	FALSE	canonical	3	40	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAATCTCGACTTTGCTA	-6	True	NA	16	True	AGTAAA	-12	NA	26512532	26514562	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_26513035_26513411
H1_mix_00058815	chr22	+	2053	1	FSM	ENSG00000261188.2	ENST00000566814.1	2032	1	-21	0	-13	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGACTTTGCTACTTCTT	NA	False	NA	22	True	AGTAAA	-18	NA	26512515	26514568	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_26512500_26514600
H1_mix_00058816	chr22	+	733	1	FSM	ENSG00000213707.2	ENST00000395823.2	563	1	77	-247	77	247	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTCCTGATGGTATTT	170	False	NA	NA	False	NA	NA	NA	26560602	26561335	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_26560600_26561300
H1_mix_00058817	chr22	+	836	6	FSM	ENSG00000196431.4	ENST00000354760.4	809	6	-27	0	-27	0	multi-exon	FALSE	canonical	2	6	junction_3	0.748331477354788	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTGTGCTTTTCAATTT	NA	False	NA	6	True	AATAAA	-18	NA	26621935	26630669	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_26621987_26622584_26622636_26623233_26623353_26625480_26625623_26628287_26628431_26630339
H1_mix_00058818	chr22	+	363	3	FSM	ENSG00000225783.9	ENST00000436238.6	1236	3	-37	910	-37	0	multi-exon	FALSE	canonical	2	9	junction_1	9.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCATAGCCTACCAGCCT	9951	False	NA	NA	False	TTTAAA	-7	NA	26657183	26665639	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_26657355_26663315_26663399_26665530
H1_mix_00058819	chr22	+	9965	4	FSM	ENSG00000225783.9	ENST00000616213.4	9943	4	-22	0	-17	0	multi-exon	FALSE	canonical	3	21	junction_3	2.86744175568088	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATGACTGTGGCCTATG	11	False	NA	15	True	ATTAAA	-17	NA	26657497	26676475	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_26657655_26663315_26663399_26665530_26666938_26668157
H1_mix_00058820	chr22	+	10094	5	FSM	ENSG00000225783.9	ENST00000620145.5	10074	5	-17	-3	-17	3	multi-exon	FALSE	canonical	3	19	junction_4	3.26917420765551	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGACTGTGGCCTATGAAG	11	False	NA	18	True	ATTAAA	-20	NA	26657497	26676478	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_26657655_26663315_26663399_26665530_26666938_26667184_26667311_26668157
H1_mix_00058822	chr22	+	3037	2	FSM	ENSG00000235954.8	ENST00000662329.1	3057	2	20	0	4	0	multi-exon	FALSE	canonical	3	135	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATTTTCTTTAATAAATG	-1	True	NA	-25	True	NA	NA	NA	27919407	27924916	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_27919546_27922017
H1_mix_00058823	chr22	+	921	3	FSM	ENSG00000235954.8	ENST00000437713.7	920	3	-1	0	-1	0	multi-exon	FALSE	canonical	3	98	junction_2	18.5	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGTCAGATTATTCTT	-6	True	NA	22	True	AATAAA	-30	NA	27919402	27924963	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_27919546_27922017_27922179_27924346
H1_mix_00058824	chr22	+	1072	4	FSM	ENSG00000235954.8	ENST00000425112.2	1022	4	-63	13	-1	-13	multi-exon	FALSE	canonical	3	10	junction_2	58.6912827144429	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTATAAATTACCCAGTC	-6	True	NA	NA	False	ATTAAA	-8	NA	27919402	27986379	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_27919546_27922017_27922179_27935150_27935231_27985691
H1_mix_00058825	chr22	+	844	2	FSM	ENSG00000235954.8	ENST00000419253.1	846	2	2	0	-1	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCTCGAATGGTATCT	-6	True	NA	NA	False	ATTAAA	-21	NA	27919402	27986392	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_27919546_27985691
H1_mix_00058826	chr22	+	4120	6	FSM	ENSG00000235954.8	ENST00000659843.1	4146	6	-20	46	-1	0	multi-exon	FALSE	canonical	2	7	junction_4	5.65685424949238	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATATGGTTTTTTTTTTT	-6	True	NA	-81	True	NA	NA	NA	27919402	28002595	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_27919546_27935150_27935231_27997410_27997740_27997985_27998153_27998603_27998839_27999429
H1_mix_00058827	chr22	+	3802	4	FSM	ENSG00000235954.8	ENST00000417497.6	3733	4	15	-84	-1	0	multi-exon	FALSE	canonical	1	2	junction_3	8.65383665716478	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTTCATTTGTTTGC	-6	True	NA	3	True	AATAAA	-15	NA	27919402	28002679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_27919546_27935150_27935231_27997410_27997740_27999429
H1_mix_00058828	chr22	+	885	3	FSM	ENSG00000235954.8	ENST00000454996.7	894	3	-4	13	0	-13	multi-exon	FALSE	canonical	3	11	junction_2	6	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTATAAATTACCCAGTC	-37	True	NA	NA	False	ATTAAA	-8	NA	27919428	27986379	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_27919546_27935150_27935231_27985691
H1_mix_00058829	chr22	+	1116	6	FSM	ENSG00000100209.11	ENST00000216027.8	1106	6	-10	0	-10	0	multi-exon	FALSE	canonical	3	93	junction_1	36.0743676313252	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTATATTTCTTTTCT	-26	True	NA	6	True	AATAAA	-17	NA	28742028	28757510	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_28742332_28743881_28743979_28744614_28744705_28745863_28746009_28751240_28751289_28757077
H1_mix_00058830	chr22	+	969	5	NIC	ENSG00000100209.11	novel	1106	6	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_3	66.1414204564734	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTATATTTCTTTTCT	-24	True	NA	6	True	AATAAA	-17	NA	28742030	28757510	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_28742332_28743881_28743979_28744614_28744705_28751240_28751289_28757077
H1_mix_00058832	chr22	+	868	6	FSM	ENSG00000100209.11	ENST00000495977.1	846	6	-22	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	54.1279964528524	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTATATTTCTTTTCT	-7	True	NA	6	True	AATAAA	-17	NA	28742678	28757510	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_28742729_28743881_28743979_28744614_28744710_28745863_28746009_28751240_28751289_28757077
H1_mix_00058833	chr22	+	3948	4	FSM	ENSG00000159873.10	ENST00000448492.6	3937	4	-11	0	-11	0	multi-exon	FALSE	canonical	3	3	junction_1	261.281882690366	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATTTGTATTACTCCAC	NA	False	NA	33	True	AATAAA	-26	NA	28772662	28789301	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_28773035_28780947_28781173_28783507_28783646_28786088
H1_mix_00058835	chr22	+	3964	5	FSM	ENSG00000159873.10	ENST00000249064.9	3964	5	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_3	22.7486263321547	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGAGATATTTGTATTA	-29	True	NA	27	True	AATAAA	-20	NA	28772694	28789295	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_28773035_28773724_28773779_28780947_28781173_28783507_28783646_28786088
H1_mix_00058836	chr22	+	685	4	NNC	ENSG00000226471.7	novel	505	4	NA	NA	7	2040	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	4.49691252107735	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATTGTGGTTGTATAGG	-20	True	NA	NA	False	ATTAAA	-29	NA	28800694	28850599	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_28800738_28821971_28822180_28848390_28848472_28850246
H1_mix_00058837	chr22	+	6872	9	FSM	ENSG00000183579.16	ENST00000544604.7	6872	9	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_7	14.3478003540612	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGTCATTGGTCTGTT	-10	True	NA	27	True	AATACA	-21	NA	28883571	29057488	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_28884067_28987075_28987202_29042494_29042570_29043298_29043431_29044779_29044891_29046715_29046884_29048388_29048492_29049196_29050949_29053578
H1_mix_00058838	chr22	+	6189	9	FSM	ENSG00000183762.13	ENST00000400335.9	6181	9	-8	0	-8	0	multi-exon	FALSE	canonical	2	6	junction_6	3.79967103839267	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGGGCCCTATGCTGTC	-18	True	NA	8	True	AATAAA	-23	NA	29073026	29146820	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29073228_29094257_29094421_29098861_29098954_29121356_29121482_29125262_29125417_29137341_29137675_29138623_29138783_29140281_29140367_29141943
H1_mix_00058839	chr22	+	2194	15	FSM	ENSG00000186998.16	ENST00000334018.11	2128	15	-66	0	-66	0	multi-exon	FALSE	canonical	3	75	junction_6	13.6159045657223	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTCAGTGTGTGCT	9761	False	NA	17	True	AATAAA	-23	NA	29205829	29259597	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29206140_29214925_29215040_29215526_29215631_29225132_29225217_29226489_29226552_29231019_29231141_29231592_29231683_29232255_29232403_29233378_29233469_29233613_29233667_29234136_29234200_29234304_29234350_29243444_29243490_29254202_29254288_29258816
H1_mix_00058840	chr22	+	2192	16	NIC	ENSG00000186998.16	novel	2118	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_14	30.7776253506053	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTCAGTGTGTGCT	2	True	NA	17	True	AATAAA	-23	NA	29205922	29259597	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_29206140_29214925_29215040_29215526_29215631_29225132_29225217_29226489_29226552_29231019_29231141_29231592_29231683_29232255_29232403_29233378_29233469_29233613_29233667_29234136_29234200_29234304_29234350_29243444_29243490_29254202_29254288_29255270_29255362_29258816
H1_mix_00058841	chr22	+	2027	14	NIC	ENSG00000186998.16	novel	2128	15	NA	NA	-16	-33	combination_of_known_junctions	FALSE	canonical	1	7	junction_3	27.6488975993897	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCCAATAAAGGCCCCTAC	-41	True	NA	-16	True	NA	NA	NA	29205879	29259564	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_29206140_29214925_29215040_29215526_29215631_29226489_29226552_29231019_29231141_29231592_29231683_29232255_29232403_29233378_29233469_29233613_29233667_29234136_29234200_29234304_29234350_29243444_29243490_29254202_29254288_29258816
H1_mix_00058843	chr22	+	2446	15	FSM	ENSG00000182944.18	ENST00000629659.2	2446	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_7	1455.16973552355	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTTCTCGGCCTCTGTTC	1	False	NA	60	True	AATAAA	-24	NA	29268008	29300524	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273737_29273865_29278029_29278217_29282389_29282558_29286922_29287135_29292136_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299852_29300121
H1_mix_00058844	chr22	+	947	8	FSM	ENSG00000182944.18	ENST00000437155.6	933	8	-14	0	0	0	multi-exon	FALSE	canonical	3	167	junction_3	1521.15411340689	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCATGAGTGGCCCTGATA	-15	True	NA	NA	False	NA	NA	NA	29268267	29288687	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273737_29273865_29278029_29278217_29282389_29282558_29286922_29287135_29288605
H1_mix_00058845	chr22	+	2227	17	FSM	ENSG00000182944.18	ENST00000406548.5	2207	17	-20	0	0	0	multi-exon	FALSE	canonical	3	1786	junction_8	822.803342144251	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCGGAGTTTTTTTTTC	-1	True	NA	16	True	ATTAAA	-16	NA	29268252	29300336	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273740_29273865_29278029_29278217_29282389_29282558_29286922_29287135_29288605_29288787_29291564_29291600_29292136_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299852_29300121
H1_mix_00058846	chr22	+	2415	17	FSM	ENSG00000182944.18	ENST00000397938.7	2400	17	-15	0	0	0	multi-exon	FALSE	canonical	3	1373	junction_8	889.008849435707	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATCCTTCTCGGCCTCTG	-1	True	NA	57	True	AATAAA	-21	NA	29268252	29300521	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273740_29273865_29278029_29278217_29282389_29282558_29286922_29287135_29288605_29288787_29291561_29291600_29292136_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299852_29300121
H1_mix_00058847	chr22	+	3231	8	FSM	ENSG00000182944.18	ENST00000483415.5	3231	8	0	0	0	0	multi-exon	FALSE	canonical	3	3437	junction_7	578.798509229001	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTATGGCTTTATGCTG	-3	True	NA	NA	False	NA	NA	NA	29268312	29291019	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273740_29273865_29278029_29278217_29282389_29282558_29286922_29287135_29288605
H1_mix_00058848	chr22	+	7032	12	FSM	ENSG00000182944.18	ENST00000479135.5	7285	12	253	0	253	0	multi-exon	FALSE	canonical	3	2933	junction_4	492.574145947794	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCTCGGCCTCTGTTCC	3498	False	NA	61	True	AATAAA	-25	NA	29275881	29300525	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29278217_29282389_29282558_29286922_29287135_29288605_29291600_29292136_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299852_29300121
H1_mix_00058849	chr22	+	2630	8	FSM	ENSG00000182944.18	ENST00000469669.5	2630	8	0	0	0	0	multi-exon	FALSE	canonical	3	2985	junction_1	409.562085697415	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCTCGGCCTCTGTTCC	NA	False	NA	61	True	AATAAA	-25	NA	29290829	29300525	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299852_29300121
H1_mix_00058850	chr22	+	1289	8	FSM	ENSG00000182944.18	ENST00000360091.3	1289	8	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_6	1608.95551111107	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCTCGGCCTCTGTTCC	NA	False	NA	61	True	AATAAA	-25	NA	29292158	29300525	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299194_29299281_29299598_29299852_29300121
H1_mix_00058851	chr22	+	1993	4	FSM	ENSG00000182944.18	ENST00000610553.1	2300	4	307	0	307	0	multi-exon	FALSE	canonical	3	3494	junction_1	358.381857179679	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCGGAGTTTTTTTTTC	NA	False	NA	16	True	ATTAAA	-16	NA	29295832	29300336	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29296369_29297826_29297950_29298732_29299852_29300121
H1_mix_00058852	chr22	+	2815	6	FSM	ENSG00000185340.15	ENST00000616432.4	2925	6	110	0	42	0	multi-exon	FALSE	canonical	3	82	junction_5	31.6834341573006	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTCTGTTTCTTGGGG	32	False	NA	24	True	AGTAAA	-14	NA	29306691	29312785	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29307154_29308086_29308739_29310438_29310547_29310637_29310735_29310826_29310999_29311461
H1_mix_00058853	chr22	+	2947	5	FSM	ENSG00000185340.15	ENST00000610653.4	2238	5	-18	-691	0	0	multi-exon	FALSE	canonical	3	98	junction_1	26.2237964452136	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTCTGTTTCTTGGGG	-16	True	NA	24	True	AGTAAA	-14	NA	29307022	29312785	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29307154_29308086_29308739_29310438_29310547_29310637_29310735_29310826
H1_mix_00058854	chr22	+	1803	6	FSM	ENSG00000185340.15	ENST00000406549.7	1803	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	57.5013043330323	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTCTGTTTCTTGGGG	-16	True	NA	24	True	AGTAAA	-14	NA	29307022	29312785	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29307154_29308086_29308739_29310438_29310547_29310637_29310735_29310826_29310999_29312142
H1_mix_00058855	chr22	+	3219	6	NIC	ENSG00000185340.15	novel	2483	6	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	59.5093270000594	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTCTGTTTCTTGGGG	-10	True	NA	24	True	AGTAAA	-14	NA	29307028	29312785	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_29307154_29307345_29308739_29310438_29310547_29310637_29310735_29310826_29310999_29311461
H1_mix_00058856	chr22	+	3399	5	FSM	ENSG00000185340.15	ENST00000618518.3	3382	5	-17	0	0	0	multi-exon	FALSE	canonical	3	82	junction_4	32.1510108705776	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTCTGTTTCTTGGGG	2	True	NA	24	True	AGTAAA	-14	NA	29307040	29312785	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29308739_29310438_29310547_29310637_29310735_29310826_29310999_29311461
H1_mix_00058857	chr22	+	2494	6	FSM	ENSG00000185340.15	ENST00000621062.4	2483	6	-11	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	54.6735767990352	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTCTGTTTCTTGGGG	2	True	NA	24	True	AGTAAA	-14	NA	29307040	29312785	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29307154_29308058_29308739_29310438_29310547_29310637_29310735_29310826_29310999_29311461
H1_mix_00058858	chr22	+	3678	4	FSM	ENSG00000100285.10	ENST00000310624.7	3795	4	14	103	14	-103	multi-exon	TRUE	canonical	3	10	junction_3	3.39934634239519	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTGCTGCTGTTATTC	14	False	NA	NA	False	AATAAA	-21	NA	29480231	29491287	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29481146_29483374_29483575_29485722_29485848_29488848
H1_mix_00058859	chr22	+	6153	17	FSM	ENSG00000186575.19	ENST00000672896.1	5995	17	-162	4	-85	0	multi-exon	TRUE	canonical	3	129	junction_16	16.5094669810991	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATACTTGCCTTGGGCTT	NA	False	NA	15	True	AATAAA	-14	NA	29603470	29698594	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29604113_29636750_29636877_29639089_29639213_29642201_29642286_29654656_29654726_29655593_29655677_29658188_29658265_29661204_29661340_29664989_29665065_29668332_29668447_29671825_29671949_29673268_29673487_29674835_29674942_29678195_29678324_29681438_29681602_29683019_29683065_29694751
H1_mix_00058861	chr22	+	5884	16	FSM	ENSG00000186575.19	ENST00000361452.8	5884	16	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	39.6700838864194	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATACTTGCCTTGGGCTT	8	True	NA	15	True	AATAAA	-14	NA	29603616	29698594	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29604113_29636750_29636877_29642201_29642286_29654656_29654726_29655593_29655677_29658188_29658265_29661204_29661340_29664989_29665065_29668332_29668447_29671825_29671949_29673268_29673487_29674835_29674942_29678195_29678324_29681438_29681602_29683019_29683065_29694751
H1_mix_00058862	chr22	+	5966	16	FSM	ENSG00000186575.19	ENST00000338641.10	5950	16	-16	0	0	0	multi-exon	FALSE	canonical	3	25	junction_15	36.3571175975214	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTGCCTTGGGCTTCCTC	8	True	NA	19	True	AATAAA	-18	NA	29603616	29698598	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29604113_29636750_29636877_29639089_29639213_29642201_29642286_29654656_29654726_29655593_29655677_29658188_29658265_29661204_29661340_29664989_29665065_29668332_29668447_29671825_29671949_29673268_29673487_29674835_29674942_29678195_29678324_29681438_29681602_29694751
H1_mix_00058864	chr22	+	3361	5	FSM	ENSG00000100314.4	ENST00000216144.4	3334	5	15	-42	15	42	multi-exon	FALSE	canonical	1	3	junction_3	2	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTACTCCTTTATATTT	11	False	NA	NA	False	NA	NA	NA	29720017	29731875	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29720534_29727661_29727806_29728629_29728743_29729054_29729209_29729441
H1_mix_00058865	chr22	+	603	2	FSM	ENSG00000184076.13	ENST00000401406.3	584	2	-19	0	-14	0	multi-exon	FALSE	canonical	3	961	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACACCCCAAAGGCAGAAT	-22	True	NA	104	True	NA	NA	NA	29767354	29770027	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29767608_29769677
H1_mix_00058866	chr22	+	930	2	FSM	ENSG00000184076.13	ENST00000330029.6	916	2	-14	0	-14	0	multi-exon	FALSE	canonical	3	9230	junction_1	0	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGGGCCTCATTCAAAG	-22	True	NA	10	True	AATAAA	-14	NA	29767354	29770413	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29767549_29769677
H1_mix_00058867	chr22	+	8837	19	FSM	ENSG00000100330.16	ENST00000351488.7	4464	19	0	-4373	0	0	multi-exon	FALSE	canonical	3	20	junction_17	21.868927728629	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAATCTCCTCCTTTTTCA	31	False	NA	17	True	AATAAA	-19	NA	29883212	30030868	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29883360_29957035_29957089_29970975_29971063_29978441_29978532_29978935_29979053_29988479_29988563_29991503_29991671_29998760_29998858_30002879_30002994_30007113_30007320_30007900_30008033_30009017_30009130_30012367_30012564_30013355_30013542_30016527_30016699_30017926_30018073_30019479_30020885_30022608_30022698_30025629
H1_mix_00058868	chr22	+	9000	20	FSM	ENSG00000100330.16	ENST00000401950.7	8987	20	-14	1	-9	1	multi-exon	FALSE	canonical	3	67	junction_12	15.0388232580262	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAATCTCCTCCTTTTTC	-22	True	NA	16	True	AATAAA	-18	NA	29883159	30030867	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29883360_29957035_29957089_29970975_29971063_29978441_29978532_29978935_29979053_29988479_29988563_29991503_29991671_29998760_29998858_30002879_30002994_30007113_30007320_30007900_30008033_30009017_30009130_30012367_30012564_30013355_30013542_30016527_30016699_30017926_30018073_30019479_30020885_30022028_30022140_30022608_30022698_30025629
H1_mix_00058869	chr22	+	5882	19	FSM	ENSG00000100330.16	ENST00000323630.9	5866	19	-16	0	3	0	multi-exon	FALSE	canonical	2	12	junction_2	22.1983204792337	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTTGCTAACACTTCCT	0	True	NA	29	True	AATAAA	-29	NA	29883181	30027858	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29883360_29957035_29957089_29978441_29978532_29978935_29979053_29988479_29988563_29991503_29991671_29998760_29998858_30002879_30002994_30007113_30007320_30007900_30008033_30009017_30009130_30012367_30012564_30013355_30013542_30016527_30016699_30017926_30018073_30019479_30020885_30022028_30022140_30022608_30022698_30025629
H1_mix_00058870	chr22	+	5909	21	NIC	ENSG00000100330.16	novel	8987	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_20	19.5639336535371	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTTGCTAACACTTCCT	87	False	NA	29	True	AATAAA	-29	NA	29883268	30027858	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_29883360_29957035_29957089_29970975_29971063_29978441_29978532_29978935_29979053_29988479_29988563_29991503_29991671_29998760_29998858_30002879_30002994_30007113_30007320_30007900_30008033_30009017_30009130_30012367_30012564_30013355_30013542_30016527_30016699_30017926_30018073_30019479_30020885_30022028_30022140_30022608_30022698_30023456_30023484_30025629
H1_mix_00058871	chr22	+	1744	3	FSM	ENSG00000187860.11	ENST00000399824.6	1759	3	9	6	9	-6	multi-exon	FALSE	canonical	3	50	junction_1	1	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTGTGCTTGGCACGG	19	False	NA	NA	False	AATAAA	-11	NA	30356643	30367090	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30357133_30361960_30362115_30365989
H1_mix_00058872	chr22	+	4478	12	FSM	ENSG00000187860.11	ENST00000338306.8	4478	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	14.7978108722733	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTCCAGAAATTATATTAAT	4	True	NA	NA	False	AATAAA	-36	NA	30357006	30378673	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30357133_30361960_30362115_30365989_30366249_30369431_30369604_30370325_30370951_30371649_30371728_30372074_30372287_30373596_30373765_30373922_30374092_30375478_30375664_30376258_30376348_30376432
H1_mix_00058873	chr22	+	4226	12	FSM	ENSG00000100003.18	ENST00000615189.5	4207	12	-22	3	1	-3	multi-exon	FALSE	canonical	3	22	junction_2	3.43775825476164	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCTCGGAACCATCCTA	-29	True	NA	NA	False	AATAAA	-26	NA	30396995	30425300	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30397171_30399642_30399719_30406341_30406386_30407094_30407155_30407414_30407604_30409186_30409283_30409425_30409487_30410595_30410680_30415758_30415866_30415947_30416088_30416233_30416404_30422276
H1_mix_00058874	chr22	+	1148	1	FSM	ENSG00000273350.1	ENST00000608677.1	401	1	-697	-50	-697	50	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCACTGCTAATGTCTAT	NA	False	NA	NA	False	NA	NA	NA	30419814	30420962	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30419800_30421000
H1_mix_00058875	chr22	+	1545	4	FSM	ENSG00000242114.6	ENST00000412752.5	759	4	-375	-411	-218	0	multi-exon	FALSE	canonical	3	24	junction_2	260.620200462069	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATGTCTTCATTTCTGTT	2188	False	NA	31	True	AATAAA	-14	NA	30425404	30429054	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30425947_30426716_30426845_30427121_30427404_30428461
H1_mix_00058876	chr22	+	899	3	FSM	ENSG00000242114.6	ENST00000355143.8	891	3	-8	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	263	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTATGTCTTCATTTCTGT	-2	True	NA	30	True	AATAAA	-13	NA	30425767	30429053	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30425947_30426716_30426845_30428461
H1_mix_00058877	chr22	+	1133	4	FSM	ENSG00000242114.6	ENST00000266263.10	1133	4	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_2	72.0324001173546	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATGTCTTCATTTCTGTT	-2	True	NA	31	True	AATAAA	-14	NA	30425767	30429054	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30425947_30426716_30426845_30427170_30427404_30428461
H1_mix_00058878	chr22	+	912	4	FSM	ENSG00000242114.6	ENST00000407550.3	912	4	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_2	232.356526819359	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAGACAACTCAGGGAGAA	11	False	NA	-72	True	NA	NA	NA	30425816	30428951	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30425947_30426716_30426845_30427239_30427404_30428461
H1_mix_00058880	chr22	+	2214	9	FSM	ENSG00000185339.9	ENST00000215838.8	2192	9	-22	0	0	0	multi-exon	TRUE	canonical	3	353	junction_7	39.0664498003082	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGAGGTTGTTGATATT	3	False	NA	NA	False	NA	NA	NA	30607151	30627271	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30607396_30610870_30611064_30612872_30613043_30614348_30614502_30615300_30615474_30615600_30615788_30617329_30617496_30622967_30623084_30626459
H1_mix_00058881	chr22	+	1870	9	FSM	ENSG00000185339.9	ENST00000407817.3	1870	9	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	133.911759659113	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTGGCCTGGTGCCTCA	-9	True	NA	24	True	ATTAAA	-24	NA	30607203	30627060	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30607396_30610870_30611064_30612872_30612962_30614348_30614502_30615300_30615474_30615600_30615788_30617329_30617496_30622967_30623084_30626459
H1_mix_00058882	chr22	+	2585	2	FSM	ENSG00000100036.13	ENST00000343605.5	2585	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGTCATTTGTTGGT	-3	True	NA	20	True	AATACA	-16	NA	30635780	30647893	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30637070_30646597
H1_mix_00058883	chr22	+	4279	14	FSM	ENSG00000184792.16	ENST00000332585.11	4261	14	-18	0	-18	0	multi-exon	TRUE	canonical	2	9	junction_2	4.60126043961175	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCCACTGCCCTGTCCC	-22	True	NA	4	True	AATAAA	-17	NA	30694855	30907813	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30695554_30741160_30741370_30870428_30870683_30887425_30887619_30888222_30888341_30889176_30889235_30889489_30889637_30890727_30890974_30893121_30893243_30893462_30893567_30893637_30893734_30893816_30894002_30905836_30906070_30906196
H1_mix_00058884	chr22	+	3230	12	FSM	ENSG00000184792.16	ENST00000431368.5	3050	12	10	-190	10	0	multi-exon	FALSE	canonical	3	8	junction_1	4.53817599067225	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCCACTGCCCTGTCCC	6	True	NA	4	True	AATAAA	-17	NA	30881690	30907813	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30881803_30887425_30887619_30888222_30888341_30889176_30889235_30889489_30889637_30890727_30890974_30893121_30893243_30893462_30893567_30893637_30893734_30893816_30894002_30905836_30906070_30906196
H1_mix_00058886	chr22	+	375	2	FSM	ENSG00000253352.10	ENST00000646021.1	375	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTGCAATAGTTGGAGC	15	True	NA	NA	False	AAAACA	-42	NA	30969244	30971483	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30969387_30971250
H1_mix_00058887	chr22	+	4093	3	FSM	ENSG00000253352.10	ENST00000643280.1	3419	3	-608	-66	0	0	multi-exon	FALSE	canonical	3	76	junction_1	51	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	15	True	NA	56	True	GATAAA	-17	NA	30969244	30976063	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30971780_30972923_30973588_30975169
H1_mix_00058888	chr22	+	7082	4	Fusion	ENSG00000253352.10_ENSG00000276664.1	novel	4752	4	NA	NA	3	0	intron_retention	FALSE	canonical	3	24	junction_1	41.1204193666467	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGAGTTGGGTTTCTG	18	True	NA	24	True	AATAAA	-20	NA	30969247	30978847	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr22_+_30971780_30972047_30972173_30972854_30973602_30975169
H1_mix_00058889	chr22	+	4457	3	FSM	ENSG00000253352.10	ENST00000643920.1	4449	3	-8	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	52	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTTTGCTTAAGTTACT	-18	True	NA	8	True	AATAAA	-4	NA	30969269	30978831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30969387_30972923_30973602_30975169
H1_mix_00058890	chr22	+	7469	3	FSM	ENSG00000253352.10	ENST00000644773.2	7469	3	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_2	12.5	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTGCTTACTGTTTGAC	-18	True	NA	NA	False	AATAAA	-18	NA	30969269	30979395	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30971780_30972854_30973588_30975169
H1_mix_00058893	chr22	+	8184	2	FSM	ENSG00000253352.10_ENSG00000276664.1_ENSG00000275307.1	ENST00000566220.2	932	2	-1902	-5350	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATGGAGAGACTTGAAT	7	True	NA	NA	False	AATGAA	-26	NA	30969294	30978722	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30971611_30972854
H1_mix_00058894	chr22	+	6154	3	FSM	ENSG00000253352.10	ENST00000643071.1	6154	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	20.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATACCCTTTTTTGCTTA	393	False	NA	1	True	NA	NA	NA	30969958	30978824	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30971780_30972923_30973602_30975169
H1_mix_00058895	chr22	+	7084	2	FSM	ENSG00000253352.10	ENST00000644027.1	7084	2	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGAGTTGGGTTTCTG	616	False	NA	24	True	AATAAA	-20	NA	30970181	30978847	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30973588_30975169
H1_mix_00058896	chr22	+	5875	3	FSM	ENSG00000253352.10	ENST00000647354.1	5875	3	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_2	43	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAATAAATACCCTTTTTT	736	False	NA	-4	True	NA	NA	NA	30970301	30978819	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30971780_30972854_30973602_30975169
H1_mix_00058900	chr22	+	3154	20	FSM	ENSG00000183963.19	ENST00000347557.6	3130	20	-25	1	-24	0	multi-exon	FALSE	canonical	3	44	junction_19	18.2117431902523	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGACTCCTCTCTGCGT	NA	False	NA	27	True	GATAAA	-17	NA	31081293	31104623	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31081457_31083178_31083310_31087964_31088114_31088512_31088607_31088698_31088778_31088871_31088970_31089698_31090020_31090107_31090181_31090807_31090880_31090960_31091483_31091674_31091848_31095302_31095456_31095533_31095610_31096732_31096898_31096997_31097061_31097268_31097339_31098666_31098841_31099061_31099180_31099744_31099897_31104315
H1_mix_00058903	chr22	+	3360	13	FSM	ENSG00000185133.14	ENST00000331075.10	3348	13	-12	0	-12	0	multi-exon	TRUE	canonical	3	15	junction_2	11.5938201929591	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCGGCTCTTTCCTACTT	-23	True	NA	6	True	ATTAAA	-14	NA	31122953	31134697	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31123120_31124844_31126011_31126375_31126490_31126612_31126722_31126920_31127038_31127356_31127533_31127950_31128063_31128213_31128324_31128470_31128655_31133097_31133236_31133405_31133484_31133609_31133715_31133912
H1_mix_00058904	chr22	+	2215	13	FSM	ENSG00000185133.14	ENST00000404390.7	2215	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	13.0213499897497	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTCGGCTCTTTCCTACT	17	True	NA	5	True	ATTAAA	-13	NA	31122993	31134696	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31123120_31124844_31124907_31126375_31126490_31126612_31126722_31126920_31127038_31127356_31127533_31127950_31128063_31128213_31128324_31128470_31128655_31133097_31133236_31133405_31133484_31133609_31133715_31133912
H1_mix_00058906	chr22	+	3691	16	FSM	ENSG00000182541.18	ENST00000331728.9	3667	16	-24	0	0	0	multi-exon	FALSE	canonical	3	164	junction_15	21.3412485316321	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGGAGAGTGAAAACATGA	-2	True	NA	46	True	AATAAA	-25	NA	31212273	31280080	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31212425_31225719_31225820_31258290_31258427_31259120_31259231_31259888_31260078_31262133_31262240_31262594_31262792_31265945_31266133_31266983_31267071_31267775_31267908_31268143_31268201_31271135_31271202_31272529_31272705_31273451_31273508_31275150_31275309_31278296
H1_mix_00058907	chr22	+	2755	16	NIC	ENSG00000182541.18	novel	3667	16	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_15	49.1933148123017	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAATGCCTACTGTGTGCT	0	True	NA	NA	False	ATTAAA	-19	NA	31212275	31277638	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_31212425_31225719_31225820_31258290_31258427_31259120_31259231_31259888_31260078_31262133_31262240_31262594_31262792_31265945_31266133_31266983_31267071_31267775_31267908_31268143_31268201_31271135_31271202_31272529_31272705_31273451_31273508_31275150_31275309_31276788
H1_mix_00058915	chr22	+	5358	25	NIC	ENSG00000198089.16	novel	4226	31	NA	NA	10	0	intron_retention	FALSE	canonical	3	17	junction_22	35.4952070316856	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCTGGGGTGCAGCACCG	-3	True	NA	NA	False	NA	NA	NA	31496284	31614860	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_31496638_31508258_31508377_31528689_31528864_31546860_31546972_31550253_31550349_31556941_31557060_31561289_31561393_31573057_31573215_31575230_31575393_31578381_31578453_31583874_31583973_31585067_31585135_31589446_31589578_31602211_31602294_31602606_31602786_31603743_31603820_31604308_31604405_31604868_31604946_31606327_31606431_31607936_31608034_31611142_31611304_31611765_31611841_31611998_31613217_31613353_31613531_31613601
H1_mix_00058918	chr22	+	4031	33	FSM	ENSG00000198089.16	ENST00000400288.7	4031	33	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	33.9695980804896	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAGTTGAAAAAATTCAAT	16	True	NA	70	True	NA	NA	NA	31496535	31618588	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31496638_31508254_31508377_31528689_31528864_31531057_31531130_31546860_31546972_31550253_31550349_31556941_31557060_31561289_31561393_31573057_31573215_31575230_31575393_31578381_31578453_31580271_31580365_31583874_31583973_31585067_31585135_31589446_31589578_31602211_31602294_31602606_31602786_31603743_31603820_31604308_31604405_31604868_31604946_31606327_31606431_31607936_31608034_31611142_31611304_31611765_31611841_31613141_31613217_31613353_31613531_31613601_31613856_31614788_31614861_31615047_31615280_31616744_31616878_31616999_31617079_31618114_31618227_31618313
H1_mix_00058921	chr22	+	1535	9	ISM	ENSG00000198089.16	ENST00000452250.5	2625	21	39804	-3	205	-1	3prime_fragment	FALSE	canonical	3	97	junction_3	22.7400390281107	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCCCACTTTTCATACA	8381	False	NA	32	True	ATTAAA	-17	NA	31612977	31618550	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_+_31613217_31613353_31613531_31613601_31613856_31614788_31614861_31615047_31615280_31616744_31616878_31616999_31617079_31618114_31618227_31618313
H1_mix_00058923	chr22	+	1488	9	FSM	ENSG00000100150.20	ENST00000437411.6	1478	9	-10	0	2	0	multi-exon	FALSE	canonical	3	18	junction_1	41.197694110229	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTTCATTGTTTCTT	NA	False	NA	6	True	AATAAA	-20	NA	31753933	31784788	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31753997_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813_31768864_31778098_31778169_31783906
H1_mix_00058924	chr22	+	2697	26	FSM	ENSG00000100150.20	ENST00000642974.1	2682	26	-18	3	13	-3	multi-exon	FALSE	canonical	3	18	junction_1	39.0051073578833	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGAATTGTATTTTATC	NA	False	NA	NA	False	AATAAA	-14	NA	31753879	31837321	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31753997_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813_31768864_31778098_31778169_31783906_31783986_31784813_31784876_31792032_31792103_31792744_31792818_31797599_31797704_31798581_31798657_31802703_31802839_31804161_31804224_31804841_31804916_31806121_31806192_31809610_31809648_31810520_31810642_31814991_31815213_31819021_31819226_31821501_31821638_31822692_31822791_31833914_31833981_31836971
H1_mix_00058927	chr22	+	5282	41	FSM	ENSG00000100150.20	ENST00000646969.1	5286	41	4	0	-2	0	multi-exon	FALSE	canonical	3	17	junction_22	33.2380711684658	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTACATATCAGAAGCAAAT	-20	True	NA	-34	True	NA	NA	NA	31753998	31906975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31754165_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813_31768864_31778098_31778169_31783906_31783986_31784813_31784876_31792032_31792103_31792744_31792818_31797599_31797704_31798581_31798657_31802703_31802839_31804161_31804224_31804841_31804916_31806121_31806192_31809610_31809648_31810520_31810642_31814991_31815213_31819021_31819226_31833914_31833981_31836971_31837156_31838684_31838846_31843094_31843213_31843644_31843813_31845017_31845238_31846833_31846968_31857444_31857554_31861367_31861434_31870589_31870745_31873254_31873333_31874272_31874406_31876156_31876266_31879524_31879753_31893581_31893752_31897481_31897654_31901741_31901803_31905983_31906067_31906204
H1_mix_00058928	chr22	+	6572	43	FSM	ENSG00000100150.20	ENST00000651528.2	6554	43	-18	0	0	0	multi-exon	FALSE	canonical	3	37	junction_32	32.222590700841	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAACTAGAACTTTTTGGT	-18	True	NA	NA	False	TATAAA	-23	NA	31754000	31908033	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31754165_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813_31768864_31778098_31778169_31783906_31783986_31784813_31784876_31792032_31792103_31792744_31792818_31797599_31797704_31798581_31798657_31802703_31802839_31804161_31804224_31804841_31804916_31806121_31806192_31809610_31809648_31810520_31810642_31814991_31815213_31819021_31819226_31821501_31821638_31822692_31822791_31833914_31833981_31836971_31837156_31838684_31838846_31843094_31843213_31843644_31843813_31845017_31845238_31846833_31846968_31857444_31857554_31861367_31861434_31870589_31870745_31873254_31873333_31874272_31874406_31876156_31876266_31879524_31879753_31893581_31893752_31897481_31897654_31901741_31901803_31905983_31906067_31906204
H1_mix_00058929	chr22	+	6479	42	FSM	ENSG00000100150.20	ENST00000642696.1	6479	42	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_25	32.9739319821413	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAACTAGAACTTTTTGGT	-18	True	NA	NA	False	TATAAA	-23	NA	31754000	31908033	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31754165_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813_31768864_31778098_31778169_31783906_31783986_31784813_31784876_31792032_31792103_31792744_31792818_31797599_31797704_31798581_31798657_31802703_31802839_31804161_31804224_31804841_31804916_31806121_31806192_31809610_31809648_31810520_31810642_31814991_31815213_31819021_31819226_31821501_31821638_31822692_31822791_31833914_31833981_31836998_31837156_31838684_31838846_31843094_31843213_31843644_31843813_31845017_31845238_31846833_31846968_31857444_31857554_31870589_31870745_31873254_31873333_31874272_31874406_31876156_31876266_31879524_31879753_31893581_31893752_31897481_31897654_31901741_31901803_31905983_31906067_31906204
H1_mix_00058930	chr22	+	1300	9	FSM	ENSG00000100150.20	ENST00000645015.1	1278	9	-22	0	5	0	multi-exon	FALSE	canonical	3	109	junction_1	13.8377879373836	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATCCCAGCTACTCAGG	-13	True	NA	NA	False	AATACA	-30	NA	31754005	31784504	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31754165_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813_31768864_31778098_31778169_31783906
H1_mix_00058931	chr22	+	5453	43	NIC	ENSG00000100150.20	novel	6554	43	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_25	32.8390650751713	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTCTTTCCCCACCCAG	53	True	NA	3	True	AATAAA	-15	NA	31754071	31907012	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_31754165_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813_31768864_31778098_31778169_31783906_31783986_31784813_31784876_31792032_31792103_31792744_31792818_31797599_31797704_31798581_31798657_31802703_31802839_31804161_31804224_31804841_31804916_31806121_31806192_31809610_31809648_31810520_31810642_31814991_31815213_31819021_31819226_31821501_31821638_31822692_31822791_31833914_31833981_31836998_31837156_31838684_31838846_31843094_31843213_31843644_31843813_31845017_31845238_31846833_31846968_31857444_31857554_31861367_31861434_31870589_31870745_31873254_31873333_31874272_31874406_31876156_31876266_31879524_31879753_31893581_31893752_31897481_31897654_31901741_31901803_31905983_31906067_31906204
H1_mix_00058932	chr22	+	5420	42	FSM	ENSG00000100150.20	ENST00000400249.7	5350	42	-65	-5	0	0	multi-exon	FALSE	canonical	3	32	junction_32	32.3334611002625	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTTCCCCACCCAGTT	49	True	NA	5	True	AATAAA	-17	NA	31754067	31907014	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31754165_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813_31768864_31778098_31778169_31783906_31783986_31784813_31784876_31792032_31792103_31792744_31792818_31797599_31797704_31798581_31798657_31802703_31802839_31804161_31804224_31804841_31804916_31806121_31806192_31809610_31809648_31810520_31810642_31814991_31815213_31819021_31819226_31821501_31821638_31822692_31822791_31833914_31833981_31836971_31837156_31838684_31838846_31843094_31843213_31843644_31843813_31845017_31845238_31846833_31846968_31857444_31857554_31870589_31870745_31873254_31873333_31874272_31874406_31876156_31876266_31879524_31879753_31893581_31893752_31897481_31897654_31901741_31901803_31905983_31906067_31906204
H1_mix_00058937	chr22	+	1735	2	FSM	ENSG00000128245.15	ENST00000471374.1	1735	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTTTGGTCTTGATTT	431	False	NA	46	True	AATAAA	-20	NA	31944965	31957603	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31945236_31956138
H1_mix_00058939	chr22	+	6470	5	FSM	ENSG00000242082.2	ENST00000452181.2	6415	5	17	-72	17	72	multi-exon	FALSE	canonical	3	7	junction_4	13.4536240470737	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCTTTACTGAGTTCCA	-13	True	NA	NA	False	AATATA	-3	NA	32205131	32278454	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_32205248_32207135_32207277_32268287_32268580_32269356_32273508_32276684
H1_mix_00058940	chr22	+	5036	4	ISM	ENSG00000242082.2	ENST00000452181.2	6415	5	48	4508	-2	259	5prime_fragment	FALSE	canonical	3	35	junction_3	2.49443825784929	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCAGAAGGAAAGATTTAG	18	True	NA	NA	False	TATAAA	-19	NA	32205162	32273874	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_+_32205248_32207135_32207277_32268287_32268580_32269356
H1_mix_00058950	chr22	+	1334	5	FSM	ENSG00000100281.14	ENST00000455359.5	1325	5	-9	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	18.2414363469547	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGAAGGACAAAGAGAG	-5	True	NA	1	True	AAAAAG	-7	NA	35257486	35265567	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_35257558_35263077_35263227_35263795_35263875_35263981_35264097_35264647
H1_mix_00058951	chr22	+	4471	12	FSM	ENSG00000100281.14	ENST00000418170.5	4216	12	-255	0	-220	0	multi-exon	FALSE	canonical	3	35	junction_2	29.9630626599976	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTCTCAGCTGTCTTT	NA	False	NA	35	True	AATAAA	-45	NA	35257231	35295807	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_35257558_35262322_35262422_35263077_35263227_35263795_35263875_35263981_35264097_35264647_35265604_35283961_35284044_35285996_35286062_35287346_35287453_35288237_35288408_35292991_35293115_35293606
H1_mix_00058952	chr22	+	3988	10	NIC	ENSG00000100281.14	novel	4095	11	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_3	29.0287214094363	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTCTCAGCTGTCTTT	9	True	NA	35	True	AATAAA	-45	NA	35257500	35295807	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_35257558_35263077_35263227_35263795_35263875_35264647_35265604_35283961_35284044_35285996_35286062_35287346_35287453_35288237_35288408_35292991_35293115_35293606
H1_mix_00058953	chr22	+	4099	11	NIC	ENSG00000100281.14	novel	4216	12	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	26.1512905991272	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTCTCAGCTGTCTTT	13	True	NA	35	True	AATAAA	-45	NA	35257504	35295807	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_35257558_35263077_35263227_35263795_35263875_35263981_35264097_35264647_35265604_35283961_35284044_35285996_35286062_35287346_35287453_35288237_35288408_35292991_35293115_35293606
H1_mix_00058958	chr22	+	2385	3	FSM	ENSG00000100284.22	ENST00000492723.1	2568	3	183	0	183	0	multi-exon	FALSE	canonical	3	215	junction_2	10.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTGTCAAGTCTCCTGG	510	False	NA	23	True	ATTAAA	-23	NA	35344368	35347983	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_35345785_35346929_35346970_35347054
H1_mix_00058961	chr22	+	3458	17	FSM	ENSG00000100297.16	ENST00000216122.9	3458	17	0	0	0	0	multi-exon	FALSE	canonical	3	1292	junction_10	114.914761209124	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGCCTGGTCATTGTTGAA	-8	True	NA	19	True	AATACA	-16	NA	35400139	35425431	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_35400209_35400430_35400606_35403206_35403334_35403413_35403543_35406552_35406726_35408407_35408564_35410743_35410911_35412509_35412682_35413874_35413987_35415828_35415973_35416338_35416405_35416637_35416815_35417743_35417857_35419883_35420013_35421317_35421461_35423213_35423342_35424153
H1_mix_00058962	chr22	+	4599	9	FSM	ENSG00000100297.16	ENST00000493076.5	4599	9	0	0	0	0	multi-exon	FALSE	canonical	3	1292	junction_4	93.3283852855068	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTGGGTTTGTGCACTC	15	False	NA	19	True	AATAAA	-19	NA	35410408	35424501	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_35410911_35412509_35412682_35413874_35413987_35415828_35415973_35416338_35416405_35416637_35416815_35417743_35417857_35419883_35420013_35421317
H1_mix_00058967	chr22	+	1345	3	FSM	ENSG00000128309.17	ENST00000401419.7	1345	3	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	380	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAGTGCTAAATCTTGT	NA	False	NA	40	True	AATAAA	-3	NA	37019634	37029801	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37019775_37024191_37024811_37029215
H1_mix_00058968	chr22	+	1562	4	FSM	ENSG00000128309.17	ENST00000404393.5	1329	4	-30	-203	0	178	multi-exon	FALSE	canonical	3	16	junction_2	65.2908024831131	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAATCCTGGGCGTTCTCC	-27	True	NA	NA	False	NA	NA	NA	37019741	37029999	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37019775_37024191_37024811_37025001_37025128_37029215
H1_mix_00058969	chr22	+	1506	4	FSM	ENSG00000128309.17	ENST00000341116.7	1504	4	0	-2	0	0	multi-exon	FALSE	canonical	3	96	junction_1	381.45365234703	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGGGGCTGCCTCGGT	-1	True	NA	60	True	AATAAA	-23	NA	37019767	37029821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37019873_37023751_37023928_37024191_37024811_37029215
H1_mix_00058970	chr22	+	5872	3	FSM	ENSG00000128309.17	ENST00000485587.1	5872	3	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	10	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTTGTAGCTCTGGGGC	29	True	NA	51	True	AATAAA	-14	NA	37019797	37029812	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37019873_37023751_37023928_37024191
H1_mix_00058971	chr22	+	1350	3	FSM	ENSG00000128309.17	ENST00000429360.6	1350	3	0	0	0	0	multi-exon	FALSE	canonical	3	681	junction_1	117	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTAGCTCTGGGGCTGC	-27	True	NA	54	True	AATAAA	-17	NA	37019741	37029815	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37019873_37024191_37024811_37029215
H1_mix_00058972	chr22	+	1500	6	FSM	ENSG00000100379.18	ENST00000610767.5	1477	6	-38	15	-16	0	multi-exon	FALSE	canonical	3	7	junction_5	64.7950615402131	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAGGAACAGCCCAGCCT	12	False	NA	12	True	AATAAA	-3	NA	37051722	37063374	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37051950_37053099_37053209_37056319_37056412_37057397_37057494_37059312_37059439_37062524
H1_mix_00058973	chr22	+	2186	8	NIC	ENSG00000100379.18	novel	1760	9	NA	NA	-76	0	intron_retention	FALSE	canonical	3	22	junction_6	50.6524774259636	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAGGAACAGCCCAGCCT	NA	False	NA	12	True	AATAAA	-3	NA	37051662	37063374	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_37051950_37053099_37053209_37056319_37056412_37057397_37057494_37059312_37059439_37060822_37060923_37061103_37061630_37062524
H1_mix_00058974	chr22	+	1711	8	FSM	ENSG00000100379.18	ENST00000402077.8	1691	8	-20	0	-20	0	multi-exon	FALSE	canonical	3	67	junction_6	37.1368126949912	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCTGTTGCCCTCTTT	8	False	NA	28	True	AATAAA	-19	NA	37051718	37063390	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37051950_37053099_37053209_37056319_37056412_37057397_37057494_37059312_37059439_37060822_37060923_37061538_37061630_37062524
H1_mix_00058975	chr22	+	3206	6	ISM	ENSG00000100379.18	ENST00000402077.8	1691	8	-20	16	-20	0	intron_retention	FALSE	canonical	3	139	junction_5	16.7523132730975	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAGGAACAGCCCAGCCT	8	False	NA	12	True	AATAAA	-3	NA	37051718	37063374	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_+_37051950_37053099_37053209_37056319_37056412_37057397_37057494_37059312_37059439_37060822
H1_mix_00058977	chr22	+	2148	3	FSM	ENSG00000128283.7	ENST00000249014.5	2148	3	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	3.5	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCCTGCAAGATGCTTG	-9	True	NA	17	True	ATTAAA	-20	NA	37560479	37569405	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37560589_37566071_37566813_37568107
H1_mix_00058978	chr22	+	1384	3	FSM	ENSG00000100083.19	ENST00000489772.5	1384	3	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	35	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGTAAGAAAATAATGTACA	-25	True	NA	NA	False	AAAAAG	-7	NA	37608829	37618146	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37608904_37614189_37614275_37616921
H1_mix_00058979	chr22	+	3288	17	FSM	ENSG00000100083.19	ENST00000343632.9	2800	17	-489	1	-380	0	multi-exon	FALSE	canonical	3	210	junction_1	20.6131594800506	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGCTGCTCTCGTGGCCC	NA	False	NA	16	True	AATAAA	-17	NA	37608344	37633563	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37608904_37614189_37614275_37616921_37616998_37618447_37618547_37620237_37620362_37620812_37620914_37621615_37621697_37623326_37623468_37623551_37623634_37624968_37625077_37625796_37625950_37629461_37629527_37629997_37630171_37630902_37631100_37631995_37632166_37632404_37632516_37632600
H1_mix_00058981	chr22	+	2832	17	NIC	ENSG00000100083.19	novel	3205	18	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	63.498738914643	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTGCTCTCGTGGCCCT	11	True	NA	17	True	AATAAA	-18	NA	37609052	37633564	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_37609155_37614189_37614275_37616921_37616998_37618447_37618547_37620237_37620362_37620812_37620914_37621615_37621697_37623326_37623468_37623551_37623634_37624968_37625077_37625796_37625950_37629461_37629527_37629997_37630171_37630902_37631100_37631995_37632166_37632404_37632516_37632600
H1_mix_00058983	chr22	+	2334	12	ISM	ENSG00000100083.19	ENST00000325180.12	2528	15	9577	0	19	0	3prime_fragment	FALSE	canonical	3	43	junction_6	67.8264679315245	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTGCTCTCGTGGCCCT	9205	False	NA	17	True	AATAAA	-18	NA	37618421	37633564	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_+_37618547_37620237_37620362_37620812_37620914_37621615_37621697_37623326_37623468_37623551_37623634_37629461_37629527_37629997_37630171_37630902_37631100_37631995_37632166_37632404_37632516_37632600
H1_mix_00058987	chr22	+	1893	18	NIC	ENSG00000100092.24	novel	2658	18	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_17	32.1448925592707	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGCAGCTGCCCAAATG	40	True	NA	15	True	AATAAA	-16	NA	37639700	37656038	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_37639847_37641125_37641169_37641373_37641479_37642538_37642616_37642894_37643007_37643097_37643175_37643643_37643789_37644636_37644706_37644869_37644961_37645364_37645511_37646817_37646930_37647266_37647349_37647440_37647522_37648318_37648436_37650151_37650250_37650541_37650726_37653778_37653874_37655925
H1_mix_00058988	chr22	+	2033	2	FSM	ENSG00000241360.2	ENST00000215904.7	2012	2	-21	0	-21	0	multi-exon	FALSE	canonical	3	459	junction_1	0	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGTGTTTGAGTCTATG	NA	False	NA	26	True	AATAAA	-18	NA	37658701	37666932	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37659357_37665554
H1_mix_00058989	chr22	+	550	4	FSM	ENSG00000100097.12	ENST00000215909.10	528	4	-22	0	-22	0	multi-exon	FALSE	canonical	3	216	junction_2	16.0831174424198	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCTCGTGTGTGTGCTT	9412	False	NA	15	True	AATAAA	-26	NA	37675613	37679802	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37675712_37676985_37677066_37678482_37678655_37679602
H1_mix_00058990	chr22	+	546	3	FSM	ENSG00000100097.12	ENST00000472321.1	546	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	127	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCTCGTGTGTGTGCTT	-15	True	NA	15	True	AATAAA	-26	NA	37676998	37679802	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37677066_37678375_37678655_37679602
H1_mix_00058992	chr22	+	2852	6	FSM	ENSG00000273899.5	ENST00000359114.9	2830	6	-22	0	-2	0	multi-exon	FALSE	canonical	3	256	junction_2	20.6842935581566	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGTGTGCCTTCATTTC	4613	False	NA	15	True	ATTAAA	-17	NA	37686320	37693474	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37686476_37687909_37688016_37688311_37688361_37688849_37688993_37690696_37690795_37691173
H1_mix_00058993	chr22	+	942	7	FSM	ENSG00000273899.5	ENST00000438329.5	945	7	-2	5	-2	0	multi-exon	FALSE	canonical	3	246	junction_6	22.4530374089763	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCATGTGTGCCTTCAT	4613	False	NA	12	True	ATTAAA	-14	NA	37686320	37693471	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37686476_37687909_37688016_37688311_37688361_37688849_37688993_37690696_37690795_37691173_37691425_37693331
H1_mix_00058995	chr22	+	2137	8	FSM	ENSG00000100106.22	ENST00000407319.7	2115	8	-22	0	-17	0	multi-exon	FALSE	canonical	3	54	junction_7	114.461115400714	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAATTCTGCAGTGTAAA	NA	False	NA	7	True	AATAAA	-23	NA	37746215	37760346	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37746421_37751771_37751829_37754876_37754985_37755100_37755191_37755549_37755660_37757612_37758139_37759153_37759265_37759416
H1_mix_00058996	chr22	+	2341	14	FSM	ENSG00000100106.22	ENST00000403663.6	2324	14	-17	0	-17	0	multi-exon	TRUE	canonical	3	265	junction_2	42.7594067300439	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAATTCCTGGTGGCTGTGT	NA	False	NA	38	True	TTTAAA	-15	NA	37746215	37774140	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37746421_37751771_37751829_37754876_37754985_37755100_37755191_37755549_37755660_37757612_37758139_37759153_37759265_37765669_37765818_37768073_37768177_37769027_37769188_37769261_37769376_37771649_37771737_37772600_37772765_37773782
H1_mix_00058999	chr22	+	2204	1	FSM	ENSG00000189060.6	ENST00000340857.4	2204	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	228	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGCGGTGTATTTTTCCT	0	True	NA	17	True	AATAAA	-17	NA	37805228	37807432	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37805200_37807400
H1_mix_00059005	chr22	+	2282	11	FSM	ENSG00000100129.18	ENST00000406934.5	2282	11	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	768.126220096671	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTCGTCTCATTATTGT	42	False	NA	28	True	AGTAAA	-17	NA	37849480	37888630	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37850064_37851279_37851491_37858678_37858741_37862968_37863039_37863271_37863346_37870175_37870348_37874369_37874525_37875840_37876012_37877673_37878172_37886764_37886846_37888425
H1_mix_00059007	chr22	+	4375	16	FSM	ENSG00000100139.14	ENST00000215957.10	4710	16	0	335	0	-335	multi-exon	TRUE	canonical	3	70	junction_6	12.5563618226866	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTAGCCTGAATTTTTT	-20	True	NA	51	True	NA	NA	NA	37906296	37942487	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37906569_37911951_37912001_37912350_37912493_37917706_37917796_37919035_37919179_37921971_37922427_37924659_37924718_37925660_37926044_37927410_37927827_37931798_37931934_37932552_37932680_37932797_37932889_37933038_37933113_37937079_37937195_37937745_37937793_37940708
H1_mix_00059008	chr22	+	2204	6	FSM	ENSG00000100142.16	ENST00000492213.5	550	6	-34	-1620	-32	2	multi-exon	FALSE	canonical	2	5	junction_2	901.184198707456	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGTTCTGTTTTCTTAGG	2	False	NA	17	True	AATAAA	-18	NA	37953664	37969314	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37953808_37956772_37956843_37958373_37958472_37959345_37959477_37967098_37967171_37967624
H1_mix_00059009	chr22	+	617	5	FSM	ENSG00000100142.16	ENST00000483713.5	615	5	-2	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	782.673742692317	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACCCCCTTCCCCTCTGCT	5	True	NA	40	True	AATAAA	-14	NA	37953696	37967798	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37953808_37956772_37956902_37959345_37959477_37967098_37967171_37967624
H1_mix_00059014	chr22	+	2393	12	FSM	ENSG00000100151.16	ENST00000484021.5	2531	12	138	0	-2	0	multi-exon	FALSE	canonical	2	3	junction_1	48.5767689265028	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCGCAGTGGTCGCAGTG	-8	True	NA	20	True	AATAAA	-12	NA	38057392	38075693	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_38057437_38057752_38057851_38059233_38059346_38065001_38065131_38067703_38067771_38069032_38069123_38070837_38070892_38071681_38071745_38072476_38072611_38072999_38073093_38073772_38074452_38074863
H1_mix_00059018	chr22	+	2560	3	FSM	ENSG00000185022.12	ENST00000338483.7	2374	3	16	-202	14	202	multi-exon	FALSE	canonical	3	19	junction_2	5	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTCCTGGGAAGACAAAGC	12	True	NA	NA	False	NA	NA	NA	38202009	38216709	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_38202213_38213822_38213890_38214419
H1_mix_00059019	chr22	+	1054	4	FSM	ENSG00000100196.11	ENST00000409006.3	931	4	-82	-41	-82	41	multi-exon	FALSE	canonical	3	81	junction_2	10.077477638554	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGATGACATTTGACAGAA	NA	False	NA	NA	False	CATAAA	-44	NA	38467995	38481676	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_38468325_38474522_38474624_38479592_38479752_38481211
H1_mix_00059020	chr22	+	1782	5	FSM	ENSG00000100196.11	ENST00000216014.9	1694	5	-88	0	-70	0	multi-exon	FALSE	canonical	3	70	junction_4	13.7931142241337	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTTTTTATTTATACCT	NA	False	NA	19	True	AATAAA	-21	NA	38468007	38483447	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_38468325_38474522_38474624_38479592_38479752_38481211_38481465_38482495
H1_mix_00059021	chr22	+	1611	4	NIC	ENSG00000100196.11	novel	1694	5	NA	NA	-58	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	42.3188951756646	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTTTTTATTTATACCT	NA	False	NA	19	True	AATAAA	-21	NA	38468019	38483447	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_38468325_38474522_38474624_38481211_38481465_38482495
H1_mix_00059022	chr22	+	1448	6	FSM	ENSG00000100211.11	ENST00000396811.6	1269	6	-13	-166	0	162	multi-exon	FALSE	canonical	3	66	junction_2	127.215722298779	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAAACCTCGTCTCTACT	-20	True	NA	NA	False	NA	NA	NA	38656637	38674012	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_38656751_38665545_38665686_38668016_38668133_38670883_38670990_38671069_38671189_38673158
H1_mix_00059027	chr22	+	815	4	FSM	ENSG00000100226.16	ENST00000418601.1	810	4	-5	0	0	0	multi-exon	TRUE	canonical	3	14	junction_1	136.79506163926	429	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGTCACCAAGATTGACAT	-10	True	NA	NA	False	NA	NA	NA	38705943	38721822	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_38706148_38715906_38716088_38716651_38717001_38721741
H1_mix_00059032	chr22	+	246	1	NIC	ENSG00000128383.13	novel	1478	6	NA	NA	3724	-1605	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTATCTTCGCTGCCCGCAT	3084	False	NA	NA	False	NA	NA	NA	38961332	38961578	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_38961300_38961600
H1_mix_00059033	chr22	+	1590	8	FSM	ENSG00000179750.16	ENST00000333467.4	1590	8	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_3	17.4998542267981	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAATGTGTAGATGTCTTT	-5	True	NA	25	True	AATAAA	-39	NA	38982346	38992779	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_38982471_38984074_38984232_38985811_38986092_38986297_38986413_38989456_38989611_38991331_38991627_38992033_38992150_38992430
H1_mix_00059034	chr22	+	1844	7	FSM	ENSG00000179750.16	ENST00000402182.7	1844	7	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_3	18.6048082196213	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGCGGACCTGTAGCTGG	2	True	NA	50	True	NA	NA	NA	38982398	38992804	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_38982471_38984074_38984232_38985811_38986092_38986297_38986413_38989456_38989611_38991331_38991627_38992033
H1_mix_00059035	chr22	+	2644	4	FSM	ENSG00000244509.4	ENST00000361441.5	2644	4	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_2	22.573337271116	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTGTGTAATTTGTAGG	-2	True	NA	12	True	AATAAA	-19	NA	39014256	39020352	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_39014380_39015594_39015752_39017765_39018046_39018268
H1_mix_00059038	chr22	+	1564	8	FSM	ENSG00000239713.9	ENST00000407997.4	1564	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_7	20.3800622858594	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCCCTGTGTGATTG	-3	True	NA	14	True	AATAAA	-24	NA	39077274	39087743	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_39077379_39078931_39079086_39080932_39081228_39081470_39081586_39083730_39083885_39086278_39086568_39087010_39087127_39087406
H1_mix_00059040	chr22	+	2063	2	FSM	ENSG00000100321.15	ENST00000489206.1	1999	2	-64	0	-7	0	multi-exon	FALSE	canonical	3	619	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCGCACCAGCCCACACTC	-29	True	NA	NA	False	NA	NA	NA	39349941	39376210	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_39350110_39374315
H1_mix_00059042	chr22	+	4432	4	FSM	ENSG00000100321.15	ENST00000328933.10	4383	4	-49	0	-7	0	multi-exon	FALSE	canonical	3	65	junction_3	248.033599874426	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCGATTGCAAGTGTGTC	-29	True	NA	19	True	AATAAA	-19	NA	39349941	39385575	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_39350110_39374315_39374554_39376051_39376198_39381695
H1_mix_00059044	chr22	+	5395	2	FSM	ENSG00000128268.12	ENST00000341184.7	5394	2	-1	0	-1	0	multi-exon	FALSE	canonical	2	13	junction_1	0	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGCATGTGTGGCCGG	-14	True	NA	31	True	AATAAA	-20	NA	39457010	39492194	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_39457558_39487346
H1_mix_00059045	chr22	+	3853	6	FSM	ENSG00000100335.15	ENST00000433117.6	3838	6	-15	0	-3	0	multi-exon	FALSE	canonical	3	53	junction_4	46.9535941116332	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGCATCTCTGACCAAAT	-4	True	NA	7	True	ATTAAA	-20	NA	39502286	39516380	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_39502438_39504202_39504535_39511287_39511439_39511848_39512027_39512317_39512495_39513516
H1_mix_00059046	chr22	+	5688	6	FSM	ENSG00000100335.15	ENST00000325301.7	5688	6	-3	3	-3	-3	multi-exon	FALSE	canonical	3	113	junction_4	24.6219414344198	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTGACTTGTGTGTG	-4	True	NA	14	True	AATAAA	-14	NA	39502286	39518129	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_39502438_39504202_39504535_39511287_39511439_39511848_39512027_39512231_39512495_39513516
H1_mix_00059050	chr22	+	2021	2	FSM	ENSG00000128272.18	ENST00000337304.2	2019	2	-2	0	0	0	multi-exon	FALSE	canonical	3	466	junction_1	0	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTGTGCGTTTGAATTC	-2	True	NA	37	True	AATAAA	-17	NA	39520561	39522683	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_39521672_39521772
H1_mix_00059051	chr22	+	1103	1	FSM	ENSG00000226085.3	ENST00000435169.1	820	1	5	-288	5	288	mono-exon	FALSE	NA	NA	NA	NA	NA	578	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGAAATCTGTAACTGA	NA	False	NA	NA	False	ATTAAA	-25	NA	39875293	39876396	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_39875300_39876400
H1_mix_00059054	chr22	+	17949	21	FSM	ENSG00000100354.21	ENST00000335727.13	17933	21	-17	1	0	0	multi-exon	FALSE	canonical	3	28	junction_5	13.0838641081295	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTATTGTGGTTTCCT	-5	True	NA	6	True	AATAAA	-19	NA	40177924	40335807	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_40178141_40246014_40246103_40251178_40251201_40261831_40262174_40264687_40267037_40273424_40273601_40277076_40277152_40277998_40278045_40279994_40280144_40285644_40285771_40300454_40300587_40300909_40301006_40301149_40301334_40308511_40308650_40310816_40310994_40312504_40312652_40312901_40312998_40315282_40315508_40315941_40316013_40321089_40321230_40322853
H1_mix_00059055	chr22	+	18108	22	NIC	ENSG00000100354.21	novel	18280	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_6	15.8128223753359	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTATTGTGGTTTCCT	-5	True	NA	6	True	AATAAA	-19	NA	40177924	40335807	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_40178141_40246014_40246103_40251178_40251201_40261831_40262174_40264687_40267037_40270121_40270281_40273424_40273601_40277076_40277152_40277998_40278045_40279994_40280144_40285644_40285771_40300454_40300587_40300909_40301006_40301149_40301334_40308511_40308650_40310816_40310994_40312504_40312652_40312901_40312998_40315282_40315508_40315941_40316013_40321089_40321230_40322853
H1_mix_00059056	chr22	+	1829	12	FSM	ENSG00000239900.14	ENST00000342312.9	1808	12	-21	0	-18	0	multi-exon	FALSE	canonical	3	141	junction_11	320.692716134648	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCAAACCCTGATGTGAC	NA	False	NA	NA	False	AGTAAA	-23	NA	40346481	40366996	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_40346712_40349831_40350036_40353072_40353118_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40361636_40362980_40363072_40364275_40364366_40366435
H1_mix_00059057	chr22	+	1315	10	FSM	ENSG00000239900.14	ENST00000623632.4	1336	10	21	0	-18	0	multi-exon	FALSE	canonical	3	35	junction_7	388.143571502563	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTAAATTAGTACAGCACT	NA	False	NA	-16	True	NA	NA	NA	40346481	40366614	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_40346712_40349831_40350036_40353072_40353118_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40364275_40364366_40364879_40365057_40366435
H1_mix_00059058	chr22	+	3278	12	FSM	ENSG00000239900.14	ENST00000681159.1	3278	12	0	0	0	0	multi-exon	FALSE	canonical	3	1117	junction_8	83.0086125174136	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATAAGTGATGAAGTTTG	-1	True	NA	NA	False	NA	NA	NA	40346499	40366941	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_40346712_40349831_40350036_40353072_40353118_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40363072_40364275_40364366_40364879_40365057_40366435
H1_mix_00059059	chr22	+	2020	13	FSM	ENSG00000239900.14	ENST00000625194.4	2002	13	-18	0	-18	0	multi-exon	FALSE	canonical	3	10	junction_9	343.617792758175	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGTAAATACTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	40346481	40366968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_40346712_40349831_40350036_40353072_40353118_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40361678_40362980_40363072_40364275_40364366_40364879_40365057_40366435
H1_mix_00059060	chr22	+	1877	14	FSM	ENSG00000239900.14	ENST00000680978.1	1859	14	-18	0	-18	0	multi-exon	FALSE	canonical	0	0	junction_13	332.83805611383	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCCTAAACTAGAGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	40346481	40367837	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_40346712_40349831_40350036_40353072_40353118_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40361636_40362980_40363072_40364275_40364366_40364879_40365057_40366435_40366499_40367468
H1_mix_00059062	chr22	+	4390	12	FSM	ENSG00000239900.14	ENST00000679723.1	4372	12	-18	0	-18	0	multi-exon	FALSE	canonical	3	22	junction_2	354.030838643675	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATAAAATATACATTCAT	NA	False	NA	92	True	ATTAAA	-17	NA	40346481	40369425	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_40346712_40349831_40350036_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40361636_40362980_40363072_40364275_40364366_40364879_40365057_40366435
H1_mix_00059063	chr22	+	1806	11	FSM	ENSG00000239900.14	ENST00000623287.4	1805	11	-1	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	373.234631297794	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGTAAATACTTAAAAAAAAA	5	True	NA	NA	False	NA	NA	NA	40346528	40366968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_40346712_40349831_40350036_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40361636_40362980_40363072_40364275_40364366_40364879_40365057_40366435
H1_mix_00059067	chr22	+	2741	21	NIC	ENSG00000100359.21	novel	2986	22	NA	NA	-16	0	combination_of_known_junctions	TRUE	canonical	3	134	junction_2	62.7388237059	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCTACCTGTCTTCTGTG	NA	False	NA	21	True	AATAAA	-21	NA	40370574	40410108	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_40370689_40400695_40400814_40402138_40402206_40404246_40404456_40404556_40404665_40405140_40405285_40405648_40405845_40406077_40406224_40406437_40406663_40407016_40407072_40407200_40407329_40407412_40407569_40407788_40407844_40408070_40408121_40408276_40408430_40408626_40408698_40408793_40408843_40408932_40409019_40409249_40409373_40409464_40409526_40409681
H1_mix_00059068	chr22	+	2973	20	FSM	ENSG00000100359.21	ENST00000485962.5	2973	20	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_3	41.96139896107	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCTACCTGTCTTCTGTG	16	True	NA	21	True	AATAAA	-21	NA	40370638	40410108	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_40370689_40400695_40400814_40401592_40401676_40402138_40402206_40404246_40404456_40404556_40404665_40405140_40405285_40405648_40405845_40406077_40406224_40406437_40406663_40407016_40407569_40407788_40407844_40408070_40408121_40408276_40408430_40408626_40408698_40408793_40408843_40408932_40409019_40409249_40409373_40409464_40409526_40409681
H1_mix_00059069	chr22	+	4218	9	FSM	ENSG00000100359.21	ENST00000478085.5	4218	9	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_3	35.4486865059906	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGCACCTACCTGTCTT	NA	False	NA	16	True	AATAAA	-16	NA	40404112	40410103	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_40404456_40404556_40404665_40405140_40405285_40405648_40405845_40406077_40406224_40406437_40408430_40408626_40408698_40408793_40409373_40409464
H1_mix_00059072	chr22	+	1029	6	FSM	ENSG00000100359.21	ENST00000469719.5	1029	6	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_1	39.1969386559716	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGCTAGTAGGCTCCTGG	NA	False	NA	-40	True	NA	NA	NA	40408387	40410047	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_40408430_40408626_40408698_40408793_40408843_40408932_40409373_40409464_40409526_40409681
H1_mix_00059077	chr22	+	2748	11	FSM	ENSG00000196236.13	ENST00000428799.1	2737	11	-11	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	14.6082168658601	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCCATCTTTTCTCTTC	13	True	NA	13	True	AATAAA	-18	NA	40857119	40927505	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_40857246_40868998_40869116_40870047_40870140_40881769_40882178_40886312_40886516_40907586_40907650_40909121_40909236_40914238_40914325_40922332_40922514_40924361_40924483_40926268
H1_mix_00059079	chr22	+	7938	10	FSM	ENSG00000196236.13	ENST00000357137.9	7938	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	7.55718936583642	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGGGTATGGTGTGTGT	-4	True	NA	NA	False	AATAAA	-15	NA	40857147	40932815	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_40857246_40868998_40869116_40881769_40882178_40886312_40886516_40907586_40907650_40909121_40909236_40914238_40914325_40922332_40922514_40924361_40924483_40926268
H1_mix_00059080	chr22	+	2992	1	ISM	ENSG00000196236.13	ENST00000357137.9	7938	10	72676	0	67558	0	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGGGTATGGTGTGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	40929823	40932815	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_+_40929800_40932800
H1_mix_00059084	chr22	+	702	1	FSM	ENSG00000237214.3	ENST00000418783.1	582	1	-36	-84	-36	84	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	20	False	NA	6	True	AATAAA	-29	NA	41064015	41064717	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41064000_41064700
H1_mix_00059088	chr22	+	1198	1	FSM	ENSG00000100393.14	ENST00000635552.1	1952	1	-1011	1765	257	50	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCAGAACAATAAAATTTTC	8412	False	NA	NA	False	NA	NA	NA	41157456	41158654	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41157500_41158700
H1_mix_00059090	chr22	+	5910	23	FSM	ENSG00000100403.12	ENST00000352645.5	5906	23	-4	0	-4	0	multi-exon	FALSE	canonical	3	23	junction_17	5.50975843540612	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTCCCCGAGATGTCA	-42	True	NA	19	True	AATAAA	-15	NA	41301520	41360147	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41301773_41320654_41320714_41325563_41325598_41325720_41325919_41327205_41327365_41330022_41330104_41332170_41332228_41338312_41338356_41339000_41339192_41339815_41340138_41341087_41341147_41342528_41342629_41343414_41343577_41346002_41346209_41348066_41348168_41349119_41349302_41351560_41351647_41355468_41355603_41355756_41355863_41355953_41356063_41356342_41356477_41356644_41356809_41357176
H1_mix_00059095	chr22	+	3030	18	FSM	ENSG00000100412.17	ENST00000216254.9	2734	18	-3	-293	2	0	multi-exon	FALSE	canonical	3	358	junction_14	40.2659841673944	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCAGCCCCAGGGCTAGT	-13	True	NA	NA	False	NA	NA	NA	41469113	41529267	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41469183_41499725_41499863_41507790_41508050_41511875_41511969_41515376_41515536_41515766_41515918_41517526_41517632_41518480_41518573_41520170_41520277_41522829_41522988_41523204_41523279_41523829_41523942_41524845_41524969_41525192_41525349_41526261_41526454_41527287_41527421_41527900_41528023_41528478
H1_mix_00059096	chr22	+	2827	18	FSM	ENSG00000100412.17	ENST00000396512.3	2811	18	-16	0	2	0	multi-exon	FALSE	canonical	0	0	junction_6	107.955039981649	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATTGGTGTCTGTGCCGT	-13	True	NA	32	True	AAAACA	-30	NA	41469113	41528989	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41469183_41499725_41499863_41507790_41508050_41511875_41511969_41515376_41515536_41515766_41515993_41517526_41517632_41518480_41518573_41520170_41520277_41522829_41522988_41523204_41523279_41523829_41523942_41524845_41524969_41525192_41525349_41526261_41526454_41527287_41527421_41527900_41528023_41528478
H1_mix_00059097	chr22	+	3247	17	FSM	ENSG00000100412.17	ENST00000679311.1	3244	17	-3	0	2	0	multi-exon	FALSE	canonical	3	358	junction_13	35.7145256688368	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCAGCCCCAGGGCTAGT	-13	True	NA	NA	False	NA	NA	NA	41469113	41529267	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41469183_41499725_41499863_41507790_41508050_41511875_41511969_41515376_41515536_41515766_41515918_41517526_41517632_41518480_41518573_41520170_41520277_41522829_41523279_41523829_41523942_41524845_41524969_41525192_41525349_41526261_41526454_41527287_41527421_41527900_41528023_41528478
H1_mix_00059098	chr22	+	3922	11	FSM	ENSG00000100412.17	ENST00000677492.1	3956	11	34	0	34	0	multi-exon	FALSE	canonical	3	358	junction_7	41.3072632838342	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCAGCCCCAGGGCTAGT	NA	False	NA	NA	False	NA	NA	NA	41516615	41529267	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41518573_41520170_41520277_41522829_41522988_41523204_41523279_41523829_41523942_41524845_41524969_41525192_41525349_41526261_41526454_41527287_41527421_41527900_41528023_41528478
H1_mix_00059099	chr22	+	2584	8	FSM	ENSG00000100412.17	ENST00000679284.1	2890	8	306	0	306	0	multi-exon	FALSE	canonical	3	358	junction_4	32.2730695845338	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCAGCCCCAGGGCTAGT	NA	False	NA	NA	False	NA	NA	NA	41522321	41529267	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41523279_41523829_41523942_41524845_41524969_41525192_41525349_41526261_41526454_41527287_41527421_41527900_41528023_41528478
H1_mix_00059100	chr22	+	2546	4	FSM	ENSG00000172346.15	ENST00000306149.12	2530	4	-16	0	-16	0	multi-exon	FALSE	canonical	3	9	junction_2	4.24264068711928	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGCCTGAAGCTGCCTCT	-9	True	NA	13	True	AATAAA	-19	NA	41560993	41576666	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41561184_41571842_41572142_41573654_41573778_41574732
H1_mix_00059101	chr22	+	2139	12	FSM	ENSG00000196419.13	ENST00000428575.6	2148	12	8	1	8	-1	multi-exon	FALSE	canonical	3	117	junction_2	1461.33204829426	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTTGTGTGAAGGAGAAA	2014	False	NA	22	True	AATAAA	-28	NA	41621170	41664047	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41621346_41621989_41622087_41636112_41636252_41636515_41636771_41637607_41637792_41646895_41647083_41650722_41650892_41653528_41653691_41656902_41657033_41658251_41658353_41661330_41661445_41663621
H1_mix_00059102	chr22	+	2124	13	NNC	ENSG00000196419.13	novel	2122	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1494.83490355587	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTATATACTGTTCTTTTG	-14	True	NA	9	True	AATAAA	-15	NA	41621284	41664034	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_41621346_41621989_41622087_41628117_41628231_41636112_41636252_41636515_41636771_41637607_41637792_41646895_41647083_41650722_41650891_41653528_41653691_41656902_41657033_41658251_41658353_41661330_41661445_41663621
H1_mix_00059103	chr22	+	2132	13	FSM	ENSG00000196419.13	ENST00000360079.8	2122	13	-10	0	0	0	multi-exon	FALSE	canonical	3	4455	junction_1	410.280053405259	1220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTTCTTTTGTGTGAAG	-14	True	NA	16	True	AATAAA	-22	NA	41621284	41664041	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41621346_41621989_41622087_41628117_41628231_41636112_41636252_41636515_41636771_41637607_41637792_41646895_41647083_41650722_41650892_41653528_41653691_41656902_41657033_41658251_41658353_41661330_41661445_41663621
H1_mix_00059104	chr22	+	2709	12	FSM	ENSG00000196419.13	ENST00000359308.8	2709	12	0	0	0	0	multi-exon	FALSE	canonical	3	4792	junction_3	351.060753848336	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGTTCTTTTGTGTGA	51	False	NA	14	True	AATAAA	-20	NA	41621349	41664039	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41622087_41628117_41628231_41636112_41636252_41636515_41636771_41637607_41637792_41646895_41647083_41650722_41650892_41653528_41653691_41656902_41657033_41658251_41658353_41661330_41661445_41663621
H1_mix_00059105	chr22	+	2200	13	FSM	ENSG00000196419.13	ENST00000405878.5	2200	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1504.59941835766	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGTTCTTTTGTGTGA	-4	True	NA	14	True	AATAAA	-20	NA	41621460	41664039	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41621592_41621989_41622087_41628117_41628231_41636112_41636252_41636515_41636771_41637607_41637792_41646895_41647083_41650722_41650892_41653528_41653691_41656902_41657033_41658251_41658353_41661330_41661445_41663621
H1_mix_00059107	chr22	+	5016	4	FSM	ENSG00000184208.12	ENST00000656592.1	5014	4	-2	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	5.09901951359278	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGGTGTTCTGATTTCT	-27	True	NA	3	True	AATAAA	-15	NA	41688936	41698136	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41689305_41690783_41690844_41693462_41693852_41693937
H1_mix_00059108	chr22	+	5091	3	FSM	ENSG00000184208.12	ENST00000472110.3	4852	3	11	-250	9	0	multi-exon	FALSE	canonical	3	13	junction_1	4.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGGTGTTCTGATTTCT	-16	True	NA	3	True	AATAAA	-15	NA	41688947	41698136	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41689305_41690783_41690844_41693462
H1_mix_00059111	chr22	+	5365	20	FSM	ENSG00000198911.12	ENST00000612482.4	5365	20	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_10	271.019108811021	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAGGTGTGTGAGGGTCTG	NA	False	NA	14	True	AATAAA	-22	NA	41833078	41907307	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41833359_41866830_41867281_41868610_41868793_41870888_41871036_41873797_41874020_41875336_41875452_41875542_41875725_41877228_41877422_41877941_41878124_41878658_41878759_41880715_41880993_41884841_41885012_41893116_41893286_41894819_41894938_41897051_41897162_41898648_41898782_41900329_41900499_41902969_41903156_41904862_41904975_41905439
H1_mix_00059112	chr22	+	5237	19	FSM	ENSG00000198911.12	ENST00000361204.9	5237	19	0	0	0	0	multi-exon	FALSE	canonical	3	723	junction_8	76.8698796347551	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGAGGTGTGTGAGGGTC	-15	True	NA	12	True	AATAAA	-20	NA	41833104	41907305	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41833359_41866830_41867281_41868610_41868793_41870888_41871036_41873797_41874020_41875336_41875452_41875542_41875725_41877228_41877422_41877941_41878124_41880715_41880993_41884841_41885012_41893116_41893286_41894819_41894938_41897051_41897162_41898648_41898782_41900329_41900499_41902969_41903156_41904862_41904975_41905439
H1_mix_00059113	chr22	+	5699	22	FSM	ENSG00000198911.12	ENST00000424354.5	5699	22	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_16	370.634780598865	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGAGGTGTGTGAGGGTCT	44	False	NA	13	True	AATAAA	-21	NA	41833163	41907306	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41833359_41866830_41867281_41868610_41868793_41870888_41871036_41873797_41874020_41875336_41875452_41875542_41875725_41877228_41877422_41877941_41878124_41878658_41878759_41880715_41880993_41884841_41885012_41893116_41893286_41894819_41894938_41897051_41897162_41898648_41898782_41899236_41899554_41900019_41900123_41900329_41900499_41902969_41903156_41904862_41904975_41905439
H1_mix_00059116	chr22	+	4738	10	FSM	ENSG00000100167.21	ENST00000396425.7	4649	10	-89	0	0	0	multi-exon	FALSE	canonical	3	198	junction_7	15.626030830194	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTGGCCTGTCTTATTT	32	True	NA	21	True	ACTAAA	-21	NA	41976844	41998221	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41977075_41981644_41981837_41985983_41986113_41987205_41987288_41987621_41987760_41989566_41989685_41991572_41991669_41992663_41992764_41994289_41994342_41994620
H1_mix_00059120	chr22	+	591	3	FSM	ENSG00000183172.9	ENST00000422252.1	591	3	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_1	321.5	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTGCGTGACTGAGTGAT	-12	True	NA	9	True	AATAAA	-15	NA	42079690	42083353	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_42079906_42081924_42082066_42083118
H1_mix_00059123	chr22	+	575	4	FSM	ENSG00000182057.5	ENST00000446578.1	551	4	-24	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.471404520791032	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGGAAGAGGCTGAGCT	-19	True	NA	NA	False	NA	NA	NA	42269743	42275033	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_42270026_42273893_42273975_42274655_42274822_42274987
H1_mix_00059127	chr22	+	334	1	FSM	ENSG00000276027.1	ENST00000362512.1	150	1	27	-211	27	211	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTGGGACCCACGAAACTG	26	False	NA	NA	False	NA	NA	NA	42615270	42615604	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_42615300_42615600
H1_mix_00059128	chr22	+	531	1	FSM	ENSG00000234735.1	ENST00000446663.1	358	1	42	-215	42	215	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCCTGTAGTCCCAGC	NA	False	NA	NA	False	AATACA	-22	NA	43092208	43092739	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_43092200_43092700
H1_mix_00059130	chr22	+	873	4	FSM	ENSG00000100300.18	ENST00000337554.8	836	4	-38	1	-26	0	multi-exon	FALSE	canonical	3	224	junction_1	44.0933353492591	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGGCCTTTTTGCTTGG	NA	False	NA	24	True	AATAAA	-17	NA	43151520	43163241	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_43151605_43159209_43159421_43161051_43161191_43162802
H1_mix_00059131	chr22	+	662	3	FSM	ENSG00000100300.18	ENST00000583777.5	636	3	-26	0	-26	0	multi-exon	FALSE	canonical	2	12	junction_1	153.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGGCCTTTTTGCTTGG	NA	False	NA	24	True	AATAAA	-17	NA	43151520	43163241	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_43151605_43161051_43161191_43162802
H1_mix_00059132	chr22	+	2245	9	FSM	ENSG00000100344.11	ENST00000423180.2	2222	9	-23	0	-12	0	multi-exon	FALSE	canonical	3	7	junction_1	22.9442258531422	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAATCGGTTG	-11	True	NA	79	True	NA	NA	NA	43923779	43947061	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_43924087_43926934_43927168_43928823_43928890_43932877_43933088_43934605_43934667_43937050_43937273_43939992_43940126_43944690_43944796_43946153
H1_mix_00059133	chr22	+	6650	9	FSM	ENSG00000100344.11	ENST00000216180.8	2753	9	-7	-3890	-5	3890	multi-exon	FALSE	canonical	3	48	junction_7	13.7289611770155	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTACATCCTTTCCAAGGA	7	True	NA	26	True	AATAAA	-25	NA	43923797	43951472	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_43924099_43926934_43927168_43928823_43928890_43932877_43933088_43934605_43934667_43937050_43937273_43939992_43940126_43944690_43944796_43946153
H1_mix_00059135	chr22	+	2688	1	Intergenic	novelGene_862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCCTGTGTACATCCTT	283	False	NA	18	True	AATAAA	-17	NA	43948776	43951464	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_+_43948800_43951500
H1_mix_00059138	chr22	+	3248	3	FSM	ENSG00000100347.15	ENST00000494795.1	3248	3	0	0	0	0	multi-exon	FALSE	canonical	3	578	junction_1	816	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGCAGCGTGGATGTGGT	4933	False	NA	26	True	AATAAA	-17	NA	43986343	43996529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_43989258_43990264_43990407_43996337
H1_mix_00059141	chr22	+	1843	9	FSM	ENSG00000186654.21	ENST00000611394.4	1843	9	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_1	49.9199358973947	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGTCTGCAGTGCCTGC	NA	False	NA	9	True	AATAAA	-15	NA	44668546	44737681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_44668806_44702491_44702609_44714590_44714672_44725243_44725293_44726576_44726635_44731729_44731822_44732250_44732392_44735026_44735163_44736771
H1_mix_00059143	chr22	+	1872	8	FSM	ENSG00000186654.21	ENST00000336985.11	1872	8	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_6	26.5998312101442	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGTCTGCAGTGCCTGC	-22	True	NA	9	True	AATAAA	-15	NA	44702203	44737681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_44702609_44714590_44714672_44725243_44725293_44726576_44726635_44731729_44731822_44732250_44732392_44735026_44735163_44736771
H1_mix_00059144	chr22	+	1720	7	NIC	ENSG00000186654.21	novel	1872	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	56	junction_6	47.0558179187229	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGTCTGCAGTGCCTGC	-6	True	NA	9	True	AATAAA	-15	NA	44702219	44737681	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_44702609_44714590_44714672_44725243_44725293_44726576_44726635_44731729_44731822_44732250_44732392_44736771
H1_mix_00059146	chr22	+	1965	2	FSM	ENSG00000186654.21	ENST00000475850.1	1965	2	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGTCTGCAGTGCCTGC	8841	False	NA	9	True	AATAAA	-15	NA	44734107	44737681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_44735163_44736771
H1_mix_00059148	chr22	+	1631	12	FSM	ENSG00000241484.10	ENST00000356099.11	1615	12	-16	0	1	0	multi-exon	FALSE	canonical	3	260	junction_1	30.5935768119512	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTGTTAGGATGGATG	-14	True	NA	116	True	NA	NA	NA	44752558	44862784	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_44752628_44786456_44786607_44802076_44802165_44808306_44808439_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44859730_44859835_44862274
H1_mix_00059149	chr22	+	1724	13	FSM	ENSG00000241484.10	ENST00000389774.6	1725	13	1	0	1	0	multi-exon	FALSE	canonical	0	0	junction_5	119.482100007584	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTGTTAGGATGGATG	-14	True	NA	116	True	NA	NA	NA	44752558	44862784	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_44752628_44786456_44786607_44802076_44802165_44808306_44808439_44809005_44809099_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44859730_44859835_44862274
H1_mix_00059150	chr22	+	4090	2	FSM	ENSG00000241484.10	ENST00000469342.1	363	2	-3406	-321	-3406	0	multi-exon	FALSE	canonical	3	377	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTGTTAGGATGGATG	NA	False	NA	116	True	NA	NA	NA	44856254	44862784	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_44859835_44862274
H1_mix_00059151	chr22	+	5170	8	FSM	ENSG00000093000.19	ENST00000347635.9	5151	8	-19	0	-19	0	multi-exon	FALSE	canonical	3	672	junction_2	64.4309470578814	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGAGTCTTATGTTCCT	NA	False	NA	NA	False	AATAAA	-23	NA	45163905	45188017	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_45164297_45168167_45168247_45171599_45171684_45175893_45176081_45178237_45178901_45181285_45181368_45183401_45183521_45184452
H1_mix_00059152	chr22	+	871	5	FSM	ENSG00000093000.19	ENST00000434760.5	763	5	-108	0	-33	0	multi-exon	FALSE	canonical	3	104	junction_2	362.205742638076	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATGGAAACAACATAACCA	NA	False	NA	NA	False	NA	NA	NA	45163891	45176006	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_45164297_45168167_45168247_45170987_45171178_45171599_45171684_45175893
H1_mix_00059153	chr22	+	747	4	FSM	ENSG00000093000.19	ENST00000430547.5	537	4	-94	-116	-19	0	multi-exon	FALSE	canonical	3	23	junction_3	354.777238403042	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCTCTGTGATCTGACAC	NA	False	NA	NA	False	AATACA	-3	NA	45163905	45178430	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_45164297_45168167_45168247_45171599_45171684_45178237
H1_mix_00059156	chr22	+	337	1	FSM	ENSG00000273353.1	ENST00000610217.1	321	1	-51	35	-51	-35	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATCTCACTGTAAATAAAG	NA	False	NA	NA	False	NA	NA	NA	45178938	45179275	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_45178900_45179300
H1_mix_00059157	chr22	+	759	4	FSM	ENSG00000100373.10	ENST00000396082.2	627	4	-79	-53	-37	1	multi-exon	FALSE	canonical	0	0	junction_2	3.09120616516523	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAGTAACTACTTACAGAA	NA	False	NA	NA	False	AATAAA	-20	NA	45284911	45295875	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_45285066_45285940_45286097_45293180_45293314_45295559
H1_mix_00059159	chr22	+	2883	9	FSM	ENSG00000100376.12	ENST00000441876.7	2883	9	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_4	12.4342018240014	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGCTCAGTGTTTC	-19	True	NA	13	True	AATAAA	-14	NA	45309933	45341955	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_45310184_45322370_45322427_45323174_45323428_45327841_45328064_45330602_45330732_45332424_45332711_45335349_45335383_45336327_45336412_45340385
H1_mix_00059160	chr22	+	1359	7	NNC	ENSG00000100376.12	novel	2883	9	NA	NA	57	323	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	59.8943514309432	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAAGGTCAGCTCCGCATT	38	False	NA	NA	False	AATAAA	-15	NA	45309990	45336733	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_45310184_45322370_45322427_45323171_45323428_45330602_45330732_45332424_45332711_45335349_45335383_45336327
H1_mix_00059161	chr22	+	1612	5	FSM	ENSG00000100376.12	ENST00000405673.5	1612	5	0	0	0	0	multi-exon	TRUE	canonical	1	10	junction_4	52.5184491393263	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTCCATTTGATAGCTG	0	True	NA	8	True	AATACA	-1	NA	45310123	45329412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_45310184_45322370_45322427_45323174_45323428_45327841_45328064_45328391
H1_mix_00059164	chr22	+	2355	16	FSM	ENSG00000077942.19	ENST00000402984.7	2355	16	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	387.307801797657	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACAGTGAGCCTCGCGTG	0	True	NA	27	True	AATAAA	-17	NA	45502882	45563352	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_45503065_45518681_45518788_45523090_45523205_45525542_45525679_45527846_45528010_45531264_45531325_45533062_45533165_45533760_45533899_45535199_45535338_45541228_45541373_45542154_45542284_45543400_45543527_45547084_45547205_45548612_45548745_45550491_45550616_45562911
H1_mix_00059165	chr22	+	2251	15	FSM	ENSG00000077942.19	ENST00000262722.11	2251	15	0	0	0	0	multi-exon	FALSE	canonical	3	901	junction_7	140.06968018141	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCGCGTGCCTTGGTTTT	0	True	NA	37	True	AATAAA	-27	NA	45502882	45563362	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_45503065_45518681_45518788_45525542_45525679_45527846_45528010_45531264_45531325_45533062_45533165_45533760_45533899_45535199_45535338_45541228_45541373_45542154_45542284_45543400_45543527_45547084_45547205_45548612_45548745_45550491_45550616_45562911
H1_mix_00059166	chr22	+	2904	17	FSM	ENSG00000077942.19	ENST00000327858.11	2904	17	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_15	373.825739608377	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCTGTGCATGAGAGTCT	0	True	NA	26	True	AATAAA	-21	NA	45502882	45601135	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_45503065_45518681_45518788_45525542_45525679_45527846_45528010_45531264_45531325_45533062_45533165_45533760_45533899_45535199_45535338_45541228_45541373_45542154_45542284_45543400_45543527_45547084_45547205_45548612_45548745_45550491_45550616_45574510_45574654_45576976_45577109_45600306
H1_mix_00059169	chr22	+	3297	12	FSM	ENSG00000130638.17	ENST00000252934.10	3294	12	0	-3	0	3	multi-exon	FALSE	canonical	3	860	junction_4	72.1914351276183	209	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGTAATGGTTATGTGTT	-25	True	NA	NA	False	AATAAA	-29	NA	45671833	45845310	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_45672180_45689711_45689904_45692995_45693079_45700281_45700379_45702688_45702848_45718412_45718494_45729424_45729591_45738730_45738840_45740368_45740539_45806958_45807023_45842990_45843179_45843668
H1_mix_00059171	chr22	+	345	4	FSM	ENSG00000186951.17	ENST00000440343.5	368	4	23	0	-8	0	multi-exon	FALSE	canonical	2	3	junction_3	6.54896090146283	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCTCCCCACTCGAGGC	23	False	NA	NA	False	NA	NA	NA	46150543	46198410	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_46150653_46151887_46151971_46176752_46176837_46198341
H1_mix_00059172	chr22	+	616	6	FSM	ENSG00000075234.17	ENST00000417709.5	630	6	14	0	14	0	multi-exon	FALSE	canonical	2	3	junction_2	102.322236097536	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGGACCACCCGACAGAC	346	False	NA	NA	False	NA	NA	NA	46267974	46275285	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_46268073_46268513_46268592_46269141_46269290_46272334_46272417_46273897_46274070_46275247
H1_mix_00059175	chr22	+	5013	12	Fusion	ENSG00000075218.19_ENSG00000100416.15	novel	2983	12	NA	NA	-42	0	intron_retention	TRUE	canonical	0	0	junction_1	65.8461768690063	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCTCAGGTACTTTGGG	43	False	NA	10	True	AATAAA	-16	NA	46296827	46333699	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr22_+_46297480_46308149_46308208_46308318_46308944_46312140_46312306_46313889_46314014_46316031_46316413_46323189_46323263_46326435_46326655_46328687_46328890_46329357_46329568_46330046_46331733_46333081
H1_mix_00059178	chr22	+	1830	10	FSM	ENSG00000100416.15	ENST00000381021.7	1830	10	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_3	98.9314515144978	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATAGTCTGATCGCTGC	47	False	NA	18	True	AATAAA	-14	NA	46335424	46357337	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_46335847_46337778_46337945_46346421_46346545_46350290_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
H1_mix_00059180	chr22	+	1882	11	FSM	ENSG00000100416.15	ENST00000457572.5	1882	11	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_4	111.882259541001	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATAGTCTGATCGCTGC	47	False	NA	18	True	AATAAA	-14	NA	46335424	46357337	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_46335847_46337778_46337945_46343261_46343369_46346421_46346545_46350345_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
H1_mix_00059183	chr22	+	1651	11	FSM	ENSG00000100416.15	ENST00000645190.1	1651	11	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_4	95.9126686105647	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTCTGATCGCTGCTTC	-17	True	NA	21	True	AATAAA	-17	NA	46335713	46357340	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_46335847_46337778_46337945_46343261_46343369_46346421_46346545_46350290_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
H1_mix_00059184	chr22	+	2650	8	ISM	ENSG00000100416.15	ENST00000453630.5	1775	10	292	3	1	-1	intron_retention	FALSE	canonical	3	115	junction_3	131.322783512183	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACACATAGTCTGATCGC	-14	True	NA	15	True	AATAAA	-11	NA	46335716	46357334	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_+_46335847_46337778_46337945_46346421_46346545_46350345_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443
H1_mix_00059185	chr22	+	1381	10	FSM	ENSG00000100416.15	ENST00000381019.3	1381	10	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_9	140.699838110939	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGGCTCTGGCTGCTGG	14	True	NA	NA	False	NA	NA	NA	46335744	46357184	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_46335847_46337778_46337945_46343261_46343369_46346421_46346545_46350290_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46356841
H1_mix_00059186	chr22	+	2727	9	NIC	ENSG00000100416.15	novel	1882	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	120	junction_4	122.445651209016	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATAGTCTGATCGCTGC	15	True	NA	18	True	AATAAA	-14	NA	46335745	46357337	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_46335847_46337778_46337945_46343261_46343369_46346421_46346545_46350349_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443
H1_mix_00059187	chr22	+	1590	11	NIC	ENSG00000100416.15	novel	1651	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	120	junction_4	110.799323102626	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATAGTCTGATCGCTGCT	-17	True	NA	19	True	AATAAA	-15	NA	46335713	46357338	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_46335847_46337778_46337945_46343261_46343369_46346421_46346545_46350349_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
H1_mix_00059188	chr22	+	1504	10	NIC	ENSG00000100416.15	novel	1258	11	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	152.650654182097	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTCTGATCGCTGCTTC	171	False	NA	21	True	AATAAA	-17	NA	46335954	46357340	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_46336107_46337778_46337945_46346421_46346545_46350349_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
H1_mix_00059189	chr22	+	2653	3	FSM	ENSG00000100416.15	ENST00000485559.1	2653	3	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_1	15.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGTCTGATCGCTGCTT	NA	False	NA	20	True	AATAAA	-16	NA	46353516	46357339	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_46355589_46355989_46356073_46356841
H1_mix_00059190	chr22	+	4484	19	NIC	ENSG00000075240.17	novel	4315	18	NA	NA	0	2	combination_of_known_junctions	TRUE	canonical	3	66	junction_3	7.49258893099634	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGGGCTGTCTGCCTCCT	-6	True	NA	21	True	AATAAA	-23	NA	46577128	46679787	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_46577291_46626750_46626962_46637839_46637961_46658186_46658308_46661380_46661443_46663039_46663173_46663837_46663864_46664025_46664118_46665614_46665707_46666824_46666874_46668095_46668168_46668688_46668733_46668798_46668909_46672842_46672998_46673669_46673815_46674656_46674751_46675467_46675553_46676599_46676669_46677146
H1_mix_00059191	chr22	+	4315	18	FSM	ENSG00000075240.17	ENST00000361034.7	4315	18	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	7.28034753343633	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGCTGTCTGCCTCCTTGG	30	False	NA	24	True	AATAAA	-26	NA	46626760	46679790	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_46626962_46637839_46637961_46658186_46658308_46661380_46661443_46663039_46663173_46663837_46663864_46664025_46664118_46665614_46665707_46666824_46666874_46668095_46668168_46668688_46668733_46668798_46668909_46672842_46672998_46673669_46673815_46674656_46674751_46675467_46675553_46676599_46676669_46677146
H1_mix_00059193	chr22	+	1949	12	FSM	ENSG00000054611.14	ENST00000407381.7	1949	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	44.6375671009769	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGACCGAGACGTTGCGC	24	True	NA	26	True	AATAAA	-13	NA	46762671	47174083	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_46762849_46792519_46792577_46793500_46793842_46878652_46878724_46891265_46891395_46894783_46894847_46912073_46912189_46974289_46974400_46997633_46997710_47037070_47037199_47111507_47111604_47173497
H1_mix_00059194	chr22	+	4480	13	NIC	ENSG00000054611.14	novel	2636	14	NA	NA	129	23	combination_of_known_splicesites	TRUE	canonical	3	38	junction_1	32.409703622355	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCCATCGAGGACAGGGG	705	False	NA	43	True	AATAAA	-43	NA	46763394	47175722	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_46764287_46792519_46792577_46793500_46793842_46797443_46797621_46878652_46878724_46891265_46891395_46894783_46894847_46912073_46912189_46974289_46974400_46997633_46997710_47037070_47037199_47111507_47111604_47173497
H1_mix_00059196	chr22	+	2638	4	FSM	ENSG00000219438.9	ENST00000358295.9	2638	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	222.397541952843	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGGCTTTTGTTCCCTGG	27	False	NA	18	True	AATAAA	-19	NA	48576305	48751932	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_48576572_48646596_48646747_48707716_48707845_48749838
H1_mix_00059198	chr22	+	6913	2	FSM	ENSG00000100426.7	ENST00000216268.6	6893	2	-20	0	-20	0	multi-exon	FALSE	canonical	3	174	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGGCTTATGTTTGTAAT	-11	True	NA	26	True	AATAAA	-23	NA	49853823	49890080	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_49853990_49883333
H1_mix_00059201	chr22	+	1587	11	FSM	ENSG00000184164.15	ENST00000404488.7	1577	11	-10	0	-9	0	multi-exon	FALSE	canonical	3	17	junction_5	218.400457874978	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGCGTGGGTTTGTCTCAT	NA	False	NA	34	True	AATAAA	-31	NA	49918624	49927540	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_49918899_49919229_49919313_49919729_49919841_49920155_49920248_49921584_49921762_49922296_49922444_49922611_49922708_49923233_49923318_49924359_49924456_49925416_49925558_49927254
H1_mix_00059202	chr22	+	1517	11	NNC	ENSG00000184164.15	novel	1577	11	NA	NA	-47	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_5	211.280477091472	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGAGGAGAACGGGCGTG	-13	True	NA	22	True	AATAAA	-19	NA	49918685	49927528	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_49918899_49919229_49919313_49919729_49919841_49920155_49920248_49921584_49921762_49922293_49922444_49922611_49922708_49923233_49923318_49924359_49924456_49925416_49925558_49927254
H1_mix_00059203	chr22	+	1242	9	FSM	ENSG00000184164.15	ENST00000403427.3	1242	9	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_6	196.898728728755	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGAACGGGCGTGGGTTTG	-12	True	NA	28	True	AATAAA	-25	NA	49918732	49927534	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_49918899_49919229_49919313_49919729_49919841_49920155_49920248_49921584_49921762_49922611_49922708_49924359_49924456_49925416_49925558_49927254
H1_mix_00059206	chr22	+	2321	10	FSM	ENSG00000170638.10	ENST00000380909.9	2305	10	-16	0	-16	0	multi-exon	TRUE	canonical	3	208	junction_1	64.9229362730999	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTTTTGTGACGTGTG	-21	True	NA	16	True	AATAAA	-16	NA	50185896	50199595	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_50185977_50193026_50193094_50193575_50193655_50194339_50194507_50194899_50195041_50197240_50197352_50197448_50197589_50197822_50197996_50198074_50198187_50198344
H1_mix_00059207	chr22	+	2349	10	FSM	ENSG00000170638.10	ENST00000303434.8	2329	10	-20	0	-16	0	multi-exon	FALSE	canonical	3	99	junction_1	96.8627640619882	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTGTGACGTGTGAAC	-21	True	NA	19	True	AATAAA	-19	NA	50185896	50199598	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_50186002_50193026_50193094_50193575_50193655_50194339_50194507_50194899_50195041_50197240_50197352_50197448_50197589_50197822_50197996_50198074_50198187_50198344
H1_mix_00059208	chr22	+	2194	10	FSM	ENSG00000170638.10	ENST00000395827.5	2172	10	-22	0	-22	0	multi-exon	FALSE	canonical	3	12	junction_1	123.251724751912	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGTGCCGACTCGGT	-7	True	NA	NA	False	NA	NA	NA	50190575	50199475	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_50190649_50193026_50193094_50193575_50193655_50194339_50194507_50194899_50195041_50197240_50197352_50197448_50197589_50197822_50197996_50198074_50198187_50198344
H1_mix_00059212	chr22	+	2315	9	NIC	ENSG00000073169.15	novel	2283	9	NA	NA	16	0	combination_of_known_junctions	TRUE	canonical	2	8	junction_2	69.1881492742796	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTCTCTGTGGTCATTG	5	True	NA	17	True	AATAAA	-17	NA	50201026	50217616	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_50201591_50206316_50206521_50208487_50208717_50210180_50210312_50210630_50210912_50215716_50215868_50216690_50216877_50216971_50217129_50217204
H1_mix_00059213	chr22	+	4114	24	FSM	ENSG00000100239.16	ENST00000612753.5	4094	24	-20	0	3	0	multi-exon	FALSE	canonical	3	139	junction_15	28.6734433161908	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCGTACTGTGAACCTTCC	-18	True	NA	20	True	AATAAA	-21	NA	50343306	50445090	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_50343551_50372019_50372151_50393892_50394136_50406688_50406876_50414551_50414690_50416091_50416158_50418866_50418980_50419348_50419463_50422253_50422381_50423461_50423615_50431172_50431383_50432264_50432330_50434965_50435082_50436366_50436453_50436987_50437069_50437505_50437604_50437842_50437901_50438173_50438299_50438598_50438763_50439700_50439858_50439960_50440050_50440821_50441027_50443865_50444118_50444198
H1_mix_00059217	chr22	+	3304	24	NNC	ENSG00000100239.16	novel	4094	24	NA	NA	0	-21	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	50.5344966306824	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATAAATGCTGCATTGG	6	True	NA	-3	True	NA	NA	NA	50343330	50444350	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_50343551_50372019_50372151_50393892_50394136_50406734_50406876_50414551_50414690_50416091_50416158_50418866_50418980_50419348_50419463_50422253_50422381_50423461_50423615_50431172_50431383_50432264_50432330_50434965_50435082_50436366_50436453_50436987_50437069_50437505_50437604_50437842_50437901_50438173_50438299_50438598_50438763_50439700_50439858_50439960_50440050_50440821_50441027_50443865_50444118_50444198
H1_mix_00059220	chr22	+	5988	2	FSM	ENSG00000100239.16	ENST00000470046.1	1211	2	-1948	-2829	1386	2117	multi-exon	FALSE	canonical	3	284	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAAGTTGTAAACGCGAC	9871	False	NA	NA	False	NA	NA	NA	50441138	50447207	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_50444118_50444198
H1_mix_00059221	chr22	+	4292	2	FSM	ENSG00000128165.9	ENST00000395738.2	4276	2	-21	5	-8	-2	multi-exon	FALSE	canonical	3	37	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGTCCTCAGAATCATC	-4	True	NA	NA	False	AATAAA	-18	NA	50481534	50486435	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_50481958_50482566
H1_mix_00059222	chr22	+	2097	19	FSM	ENSG00000025770.19	ENST00000395701.7	2077	19	-20	0	0	0	multi-exon	FALSE	canonical	3	248	junction_7	18.9743979556079	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCCCCCTAAAAACCCTT	-16	True	NA	24	True	AATAAA	-18	NA	50508223	50523472	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_50508446_50516446_50516549_50517426_50517483_50517576_50517662_50517740_50517810_50517972_50518053_50518132_50518279_50518648_50518733_50519189_50519321_50520964_50521037_50521542_50521610_50521740_50521849_50521985_50522040_50522180_50522252_50522342_50522416_50522500_50522570_50522670_50522721_50522820_50522923_50523016
H1_mix_00059223	chr22	+	3345	20	FSM	ENSG00000025770.19	ENST00000420993.7	3337	20	-8	0	-8	0	multi-exon	TRUE	canonical	3	248	junction_7	18.6780568072319	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGGTAACTCTCTGGCTT	NA	False	NA	10	True	AATAAA	-18	NA	50508215	50524780	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_50508446_50516446_50516549_50517426_50517483_50517576_50517662_50517740_50517810_50517972_50518053_50518132_50518279_50518648_50518733_50519189_50519321_50520964_50521037_50521542_50521610_50521740_50521849_50521985_50522040_50522180_50522252_50522342_50522416_50522500_50522570_50522670_50522721_50522820_50522923_50523016_50523167_50523234
H1_mix_00059228	chr22	+	5893	12	FSM	ENSG00000008735.14	ENST00000329492.6	5700	12	-192	-1	-192	1	multi-exon	FALSE	canonical	3	22	junction_4	7.8086622805427	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTATTGCATTCTTCTTT	9	True	NA	NA	False	AATAAA	-19	NA	50600600	50613979	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_50600884_50601788_50601895_50603222_50603499_50603625_50603720_50603840_50605065_50605367_50605444_50605561_50605735_50605824_50605935_50606657_50606766_50606920_50606992_50610211_50610311_50610706
H1_mix_00059234	chr22	+	658	4	FSM	ENSG00000184319.17	ENST00000423888.6	732	4	2	72	2	-7	multi-exon	FALSE	canonical	2	15	junction_3	26.5622957508487	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTATTTGGAATCCATG	4	True	NA	NA	False	ATTAAA	-14	NA	50783811	50789172	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_50784022_50785172_50785294_50788749_50788799_50788894
H1_mix_00059235	chr22	+	1080	3	FSM	ENSG00000184319.17	ENST00000651346.2	1284	3	105	99	-25	7	multi-exon	FALSE	canonical	3	80	junction_1	68	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTGGTGAATATTTATT	42	False	NA	NA	False	AAGAAA	-27	NA	50783849	50799441	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_50784022_50785172_50785294_50798654
H1_mix_00059236	chr22	-	2269	1	FSM	ENSG00000215268.3	ENST00000417863.1	2260	1	-7	-2	-7	2	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAACCCTGTGTGCGCTGTG	NA	False	NA	NA	False	NA	NA	NA	15564283	15562014	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_15562000_15564300
H1_mix_00059237	chr22	-	1049	1	FSM	ENSG00000215270.3	ENST00000398242.2	1049	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCCTGGCCCCCGCCTT	NA	False	NA	NA	False	NA	NA	NA	15855243	15854194	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_15854200_15855200
H1_mix_00059238	chr22	-	5077	1	FSM	ENSG00000183307.4	ENST00000331437.4	5064	1	-15	2	-8	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAAGCTTCCTGTGTGGTT	-33	False	NA	-7	True	AATAAA	-40	NA	17121375	17116298	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_17116300_17121400
H1_mix_00059239	chr22	-	3626	3	FSM	ENSG00000069998.12	ENST00000477157.5	3614	3	0	-12	0	1	multi-exon	FALSE	canonical	3	925	junction_1	22.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTCTGGAGTGCACTA	NA	False	NA	1	True	AATAAA	-40	NA	17143647	17137509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_17138358_17138549_17138739_17141058
H1_mix_00059240	chr22	-	1809	8	FSM	ENSG00000069998.12	ENST00000336737.8	1799	8	0	-10	0	1	multi-exon	FALSE	canonical	3	636	junction_7	106.005005657704	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTCTGGAGTGCACTA	-20	True	NA	1	True	AATAAA	-40	NA	17159277	17137509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_17138358_17138549_17138739_17141058_17141234_17143097_17143132_17145023_17145118_17148447_17148561_17149541_17149746_17159125
H1_mix_00059243	chr22	-	3565	6	FSM	ENSG00000093072.18	ENST00000648061.1	2901	6	-178	-486	9	-46	multi-exon	FALSE	canonical	2	8	junction_4	80.3930345241427	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTGATCTCTGATTTG	NA	False	NA	NA	False	NA	NA	NA	17199774	17178835	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_17181577_17181819_17182023_17182603_17182762_17188338_17188448_17191682_17191811_17199548
H1_mix_00059244	chr22	-	3186	7	FSM	ENSG00000093072.18	ENST00000330232.8	3195	7	9	0	9	0	multi-exon	FALSE	canonical	3	193	junction_2	12.3153021346074	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGCTGTCACTGTGTC	NA	False	NA	-8	True	AATAAA	-13	NA	17199774	17179305	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_17181577_17181819_17182023_17182603_17182762_17188338_17188448_17189941_17190033_17191682_17191811_17199548
H1_mix_00059245	chr22	-	3140	7	FSM	ENSG00000093072.18	ENST00000648668.1	3140	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	81.0365144034877	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCATTGAATGAGTGGCT	-1	True	NA	-19	True	AATAAA	-2	NA	17198789	17179316	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_17181577_17181819_17182023_17182603_17182762_17188338_17188448_17189941_17190033_17191682_17191811_17198598
H1_mix_00059246	chr22	-	497	2	FSM	ENSG00000093072.18	ENST00000469063.1	510	2	13	0	13	0	multi-exon	FALSE	canonical	3	217	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACATCCCCATAGAAGTCT	148	False	NA	NA	False	NA	NA	NA	17188714	17182640	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_17182762_17188338
H1_mix_00059247	chr22	-	469	1	FSM	ENSG00000232305.1	ENST00000455251.1	388	1	-120	39	-120	-39	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTCTCCCTGAACTCAA	NA	False	NA	NA	False	NA	NA	NA	17424895	17424426	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_17424400_17424900
H1_mix_00059248	chr22	-	1333	9	FSM	ENSG00000131100.13	ENST00000253413.10	1333	9	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_1	37.3689376354212	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGGTTTTGACAGAGTCA	12	True	NA	3	True	NA	NA	NA	17628749	17592135	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_17592737_17594528_17594617_17598193_17598289_17600026_17600096_17601091_17601182_17612811_17612879_17613210_17613321_17619460_17619527_17628602
H1_mix_00059249	chr22	-	994	8	FSM	ENSG00000131100.13	ENST00000399798.6	994	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	153.411544679064	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGTGGTTGCATGGGCT	12	True	NA	39	True	NA	NA	NA	17628749	17592408	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_17592737_17594528_17594617_17598193_17598289_17600026_17600096_17601091_17601182_17612811_17612879_17613210_17613321_17628602
H1_mix_00059250	chr22	-	5311	6	FSM	ENSG00000015475.19	ENST00000622694.5	2177	6	-26	-3108	0	3108	multi-exon	FALSE	canonical	3	357	junction_5	88.9966291496481	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTATTAGAACTGTGAAGG	-4	True	NA	NA	False	AATAAA	-13	NA	17774495	17731029	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_17735592_17738016_17738230_17739348_17739489_17743802_17744014_17750104_17750175_17774380
H1_mix_00059251	chr22	-	5533	6	FSM	ENSG00000015475.19	ENST00000317361.11	2495	6	0	-3038	0	3038	multi-exon	FALSE	canonical	3	32	junction_5	206.785879595295	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAGAAAAACTAACAAA	475	False	NA	NA	False	AAAAAG	-1	NA	17774016	17731099	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_17735592_17738016_17738230_17739348_17739489_17743802_17744014_17750104_17750175_17773609
H1_mix_00059252	chr22	-	1879	4	FSM	ENSG00000015475.19	ENST00000399765.5	1879	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	245.837796569653	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCACTGTTTGGAAATAAA	2	True	NA	-37	True	AAAAAG	-23	NA	17774489	17734174	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_17735592_17738016_17738230_17739348_17739489_17774380
H1_mix_00059253	chr22	-	907	5	FSM	ENSG00000015475.19	ENST00000399767.6	907	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_4	223.194281960807	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAATGGCCTTCATAT	-4	True	NA	-39	True	AATATA	-27	NA	17774495	17735363	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_17735592_17738016_17738230_17739348_17739489_17743802_17744014_17774380
H1_mix_00059254	chr22	-	3926	5	FSM	ENSG00000093100.13	ENST00000476405.1	4328	5	406	-4	406	4	multi-exon	FALSE	canonical	3	13	junction_4	1.87082869338697	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGTTTCTTAAGTCATT	7079	False	NA	-17	True	AATAAA	-17	NA	17811091	17787647	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_17790917_17790997_17791072_17791201_17791302_17808843_17808938_17810702
H1_mix_00059255	chr22	-	9177	32	NIC	ENSG00000243156.9	novel	9447	32	NA	NA	12	1	combination_of_known_junctions	TRUE	canonical	1	1	junction_9	7.9666317628042	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGTTTCTTAAGTCATT	14	True	NA	-17	True	AATAAA	-17	NA	18001489	17787647	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_17790917_17790997_17791072_17791201_17791302_17808843_17808938_17810702_17810814_17812506_17812558_17816689_17816785_17817310_17819130_17821426_17821510_17822029_17822171_17822946_17823061_17831853_17832108_17841821_17842018_17864898_17864987_17865923_17866013_17871836_17872024_17885877_17886052_17887169_17887233_17887322_17887436_17889033_17889231_17891484_17891633_17893807_17893905_17895283_17895411_17896245_17896362_17896723_17896982_17899447_17899549_17900841_17900998_17901877_17901980_17902630_17902748_17904631_17904840_17906548_17906887_18001392
H1_mix_00059257	chr22	-	2425	3	FSM	ENSG00000274602.5	ENST00000610959.4	2425	3	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_2	25	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGAGGTTTTGTGTCAA	NA	False	NA	NA	False	AATAAA	-26	NA	18537791	18533645	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_18534054_18535244_18535329_18535858
H1_mix_00059258	chr22	-	1823	4	FSM	ENSG00000274602.5	ENST00000619742.4	1787	4	-36	0	-36	0	multi-exon	FALSE	canonical	3	87	junction_3	58.8104299139759	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTTGGAATCTGTGAGG	NA	False	NA	NA	False	AATAAA	-15	NA	18537901	18533656	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_18534054_18535244_18535329_18535858_18535949_18536649
H1_mix_00059259	chr22	-	1807	9	ISM	ENSG00000274602.5	ENST00000617243.4	2340	14	7731	-11	-2757	0	3prime_fragment	FALSE	canonical	2	2	junction_4	71.330218000508	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGAGGTTTTGTGTCAA	NA	False	NA	NA	False	AATAAA	-26	NA	18540622	18533645	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_-_18534054_18535244_18535329_18535858_18535949_18536649_18537413_18538432_18538559_18538639_18538745_18539227_18539338_18540401_18540473_18540572
H1_mix_00059260	chr22	-	567	4	ISM	ENSG00000274602.5	ENST00000612579.4	1703	16	498	9714	53	4292	internal_fragment	FALSE	canonical	1	1	junction_1	28.2881993457028	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGAAAGAAGGCTTGTCT	NA	False	NA	NA	False	NA	NA	NA	18548300	18543718	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_-_18543738_18544651_18544782_18547245_18547374_18548010
H1_mix_00059262	chr22	-	5572	1	FSM	ENSG00000275793.1	ENST00000619918.1	6105	1	532	1	532	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAACATATTTTAGAAG	NA	False	NA	NA	False	ATTAAA	-10	NA	18611387	18605815	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_18605800_18611400
H1_mix_00059263	chr22	-	4677	11	FSM	ENSG00000100033.17	ENST00000482858.5	4676	11	0	-1	0	0	multi-exon	FALSE	canonical	3	11	junction_2	112.70443646991	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGAGCCCTTTGCCCTC	150	False	NA	NA	False	AATAAA	-15	NA	18936142	18912780	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_18913363_18913437_18913527_18916889_18916989_18918315_18918492_18919450_18919598_18919705_18922405_18922816_18923180_18925050_18925201_18925687_18925723_18930989_18931199_18936014
H1_mix_00059264	chr22	-	1929	12	NIC	ENSG00000100033.17	novel	2203	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	139.026663712903	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGAGCCCTTTGCCCTC	-1	True	NA	NA	False	AATAAA	-15	NA	18936293	18912780	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_18913363_18913437_18913527_18916889_18916989_18918315_18918492_18919450_18919598_18919705_18919799_18921341_18921424_18922324_18922405_18922816_18922934_18925050_18925201_18925687_18925723_18936014
H1_mix_00059265	chr22	-	2203	14	FSM	ENSG00000100033.17	ENST00000357068.11	2203	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	106.238205053633	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGAGCCCTTTGCCCTC	-1	True	NA	NA	False	AATAAA	-15	NA	18936293	18912780	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_18913363_18913437_18913527_18916889_18916989_18918315_18918492_18919450_18919598_18919705_18919799_18921341_18921424_18922324_18922405_18922816_18922934_18923114_18923180_18925050_18925201_18925687_18925723_18930989_18931199_18936014
H1_mix_00059266	chr22	-	3106	13	FSM	ENSG00000100033.17	ENST00000491604.5	3106	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	107.107001275464	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGAGCCCTTTGCCCTC	-3	True	NA	NA	False	AATAAA	-15	NA	18936295	18912780	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_18913363_18913437_18913527_18916889_18916989_18918315_18918492_18919450_18919598_18919705_18919799_18921341_18922405_18922816_18922934_18923114_18923180_18925050_18925201_18925687_18925723_18930989_18931199_18936014
H1_mix_00059274	chr22	-	4569	10	NNC	ENSG00000070413.20	novel	4438	10	NA	NA	-77	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	176.91184943111	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTTAGTCCTTGGTGTG	NA	False	NA	-1	True	AATAAA	-19	NA	19122531	19036281	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_19039122_19041057_19041295_19041806_19041960_19048439_19048644_19056985_19057163_19063201_19063279_19064847_19065076_19068099_19068226_19089367_19089491_19122127
H1_mix_00059275	chr22	-	4370	9	NNC	ENSG00000070413.20	novel	4361	9	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	221.464408822276	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTTAGTCCTTGGTGTG	NA	False	NA	-1	True	AATAAA	-19	NA	19122455	19036281	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_19039122_19041057_19041295_19041806_19041960_19048439_19048644_19056985_19057163_19063201_19063279_19064847_19065076_19068099_19068226_19122127
H1_mix_00059276	chr22	-	4429	10	NIC	ENSG00000070413.20	novel	4438	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	208	junction_7	114.798481514455	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCATGGTTAGTCCTTGG	1	True	NA	-5	True	AATAAA	-15	NA	19122412	19036285	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_19039122_19041057_19041295_19041806_19041960_19048439_19048644_19056985_19057163_19063201_19063279_19064847_19065059_19068099_19068226_19089367_19089491_19122127
H1_mix_00059277	chr22	-	2459	4	FSM	ENSG00000070413.20	ENST00000467659.1	2459	4	0	0	0	0	multi-exon	FALSE	canonical	3	477	junction_1	31.2552217859494	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCACACCTCCCGGCCCCT	20	False	NA	54	True	NA	NA	NA	19057053	19037836	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19039122_19041057_19041960_19048439_19048644_19056985
H1_mix_00059278	chr22	-	2221	1	FSM	ENSG00000273311.1	ENST00000609958.1	2214	1	0	-7	0	7	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATCAGGTGTCTCAATAT	8698	False	NA	NA	False	AATAAA	-20	NA	19048375	19046154	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19046200_19048400
H1_mix_00059279	chr22	-	518	3	FSM	ENSG00000070413.20	ENST00000608548.1	518	3	0	0	0	0	multi-exon	FALSE	canonical	3	540	junction_2	6.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTGCTTCCTCAGTGGT	NA	False	NA	NA	False	GGGGCT	-14	NA	19063277	19048378	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19048644_19056985_19057163_19063201
H1_mix_00059280	chr22	-	5359	10	FSM	ENSG00000100056.12	ENST00000252137.11	5359	10	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_6	15.2784848321236	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTGCTTCTCGTTAT	12	True	NA	-3	True	GATAAA	-16	NA	19144651	19130278	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19134476_19135059_19135176_19137322_19137433_19138214_19138318_19139158_19139293_19139611_19139730_19139854_19140025_19142537_19142634_19142725_19142895_19144505
H1_mix_00059281	chr22	-	1548	9	FSM	ENSG00000100075.10	ENST00000215882.10	1548	9	0	0	0	0	multi-exon	FALSE	canonical	3	1471	junction_8	160.180367086606	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGTCCTGTGTTCGT	0	True	NA	-15	True	AATAAA	-16	NA	19178736	19175580	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19176245_19176420_19176495_19176577_19176694_19176845_19176951_19177119_19177205_19177726_19177866_19177941_19178042_19178132_19178241_19178579
H1_mix_00059282	chr22	-	1514	9	FSM	ENSG00000100075.10	ENST00000451283.5	1514	9	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_8	575.608373809833	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTGTTGCAGCCTCCTG	340	False	NA	-27	True	AATAAA	-4	NA	19178521	19175592	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19176245_19176420_19176495_19176577_19176694_19176845_19176951_19177119_19177205_19177726_19177866_19177941_19178042_19178132_19178241_19178386
H1_mix_00059283	chr22	-	5505	33	FSM	ENSG00000070371.16	ENST00000427926.6	5518	33	6	7	3	-4	multi-exon	FALSE	canonical	3	17	junction_21	9.86708543593294	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCAAAGGTGCTCTGCTTG	-2	True	NA	-4	True	ATTAAA	-13	NA	19291713	19179479	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19179970_19180198_19180239_19180730_19180807_19183389_19183612_19187557_19187729_19187980_19188092_19191303_19191436_19196265_19196416_19196488_19196657_19199733_19199842_19201328_19201494_19208153_19208312_19208921_19209115_19210325_19210510_19216110_19216257_19219884_19220008_19221376_19221612_19221950_19222094_19222683_19222810_19223890_19224055_19225452_19225634_19226218_19226384_19229837_19229976_19232475_19232599_19233165_19233319_19233421_19233623_19234508_19234707_19235695_19235870_19239274_19239389_19242774_19242937_19253958_19254228_19275622_19275831_19291599
H1_mix_00059284	chr22	-	1695	12	FSM	ENSG00000070371.16	ENST00000617926.4	1695	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	15.8218386577666	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAATATTTATTTTTGCT	NA	False	NA	NA	False	NA	NA	NA	19207674	19179774	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19179970_19180198_19180239_19180730_19180807_19183389_19183612_19187557_19187729_19187980_19188092_19191303_19191436_19196265_19196416_19196488_19196657_19199733_19199842_19201328_19201494_19207517
H1_mix_00059285	chr22	-	4053	26	NNC	ENSG00000100084.14	novel	4053	25	NA	NA	32	0	at_least_one_novel_splicesite	TRUE	canonical	3	41	junction_20	94.6499741151576	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCCTGATTTCTCTTGCC	671	False	NA	-8	True	AATAAA	-23	NA	19431664	19330697	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_19331557_19351357_19351447_19353355_19353520_19353995_19354119_19355759_19355866_19356229_19356289_19356889_19357052_19359335_19359485_19361236_19361342_19361726_19361932_19375630_19375793_19377868_19378067_19383619_19383706_19385520_19385737_19387710_19387817_19388483_19388555_19392100_19392215_19394341_19394510_19396786_19396948_19397991_19398088_19405462_19405532_19405785_19405881_19407183_19407275_19408482_19408594_19410715_19410779_19431439
H1_mix_00059286	chr22	-	5069	25	NNC	ENSG00000100084.14	novel	4053	25	NA	NA	-807	0	at_least_one_novel_splicesite	FALSE	canonical	3	124	junction_22	63.2345172090897	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCCTGATTTCTCTTGCC	NA	False	NA	-8	True	AATAAA	-23	NA	19432540	19330697	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_19331557_19351357_19351447_19353355_19353520_19353995_19354119_19355759_19355866_19356229_19356289_19356889_19357052_19359335_19359485_19361236_19361342_19361726_19361932_19375630_19375793_19377868_19378067_19383619_19383706_19385520_19385737_19387710_19387817_19388483_19388555_19392100_19392215_19394341_19394510_19396786_19396948_19397991_19398088_19405785_19405881_19407183_19407275_19408273_19408594_19410715_19410779_19431439
H1_mix_00059287	chr22	-	4346	28	NNC	ENSG00000100084.14	novel	4053	25	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_21	127.361942792497	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCCTGATTTCTCTTGCC	5	True	NA	-8	True	AATAAA	-23	NA	19431714	19330697	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_19331557_19351357_19351447_19353355_19353520_19353995_19354119_19355759_19355866_19356229_19356289_19356889_19357052_19359335_19359485_19361236_19361342_19361726_19361932_19375630_19375793_19377868_19378067_19383619_19383706_19385520_19385737_19387710_19387817_19388483_19388555_19392100_19392215_19394341_19394510_19396786_19396948_19397991_19398088_19399079_19399193_19405462_19405532_19405785_19405881_19407183_19407275_19408273_19408404_19408482_19408594_19410715_19410779_19431439
H1_mix_00059288	chr22	-	4053	25	FSM	ENSG00000100084.14	ENST00000263208.5	4053	25	0	0	0	0	multi-exon	TRUE	canonical	3	236	junction_22	49.904840001302	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCCTGATTTCTCTTGCC	-14	True	NA	-8	True	AATAAA	-23	NA	19431733	19330697	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19331557_19351357_19351447_19353355_19353520_19353995_19354119_19355759_19355866_19356229_19356289_19356889_19357052_19359335_19359485_19361236_19361342_19361726_19361932_19375630_19375793_19377868_19378067_19383619_19383706_19385520_19385737_19387710_19387817_19388483_19388555_19392100_19392215_19394341_19394510_19396786_19396948_19397991_19398088_19405785_19405881_19407183_19407275_19408482_19408594_19410715_19410779_19431439
H1_mix_00059290	chr22	-	1005	3	FSM	ENSG00000242259.9	ENST00000399568.5	1005	3	0	0	0	0	multi-exon	FALSE	canonical	3	514	junction_2	10	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCGGCCATGACCTACCA	13	True	NA	-37	True	AATAAA	-15	NA	19447692	19440885	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19441695_19447377_19447546_19447664
H1_mix_00059291	chr22	-	3720	3	FSM	ENSG00000242259.9	ENST00000399562.9	3720	3	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	179	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCGGCCATGACCTACCA	-6	True	NA	-37	True	AATAAA	-15	NA	19447711	19440885	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19444391_19447377_19447546_19447664
H1_mix_00059292	chr22	-	1791	12	FSM	ENSG00000070010.19	ENST00000263202.15	1791	12	0	0	0	0	multi-exon	FALSE	canonical	3	827	junction_11	63.568665288895	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCCTGTATTTTTTAT	-10	True	NA	-17	True	ATTAAA	-14	NA	19479193	19449910	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19450745_19454748_19454831_19455679_19455769_19456586_19456635_19456852_19456919_19458070_19458140_19465201_19465275_19467872_19468004_19471686_19471809_19475067_19475101_19475469_19475603_19479082
H1_mix_00059293	chr22	-	5748	11	FSM	ENSG00000070010.19	ENST00000459854.5	5038	11	0	-710	0	0	multi-exon	FALSE	canonical	3	58	junction_9	264.062416863892	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCCTGTATTTTTTAT	11	True	NA	-17	True	ATTAAA	-14	NA	19479172	19449910	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19454831_19455679_19455769_19456586_19456635_19456852_19456919_19458070_19458140_19465201_19465275_19467872_19468004_19471686_19471809_19475067_19475101_19475495_19475603_19479082
H1_mix_00059294	chr22	-	1394	1	FSM	ENSG00000184113.10	ENST00000618236.2	1384	1	-10	0	-10	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCACCTGTGTCCTGTTCT	957	False	NA	-3	True	AGTAAA	-15	NA	19524420	19523026	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19523000_19524400
H1_mix_00059295	chr22	-	6615	8	FSM	ENSG00000185838.14	ENST00000329517.11	6642	8	0	27	0	-27	multi-exon	FALSE	canonical	3	121	junction_4	16.1321076725635	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACATTAATAAACCACCTC	7	True	NA	NA	False	NA	NA	NA	19854874	19783249	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19820597_19820724_19821227_19821376_19854442_19854540_19854819
H1_mix_00059296	chr22	-	1542	8	NIC	ENSG00000185838.14	novel	1699	7	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	3	60	junction_7	34.7680359889743	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGGCTTGAGGTGGGA	75	False	NA	-8	True	AATAAA	-14	NA	19854806	19788414	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19820597_19820724_19821227_19821376_19854442_19854540_19854659
H1_mix_00059297	chr22	-	1699	7	FSM	ENSG00000185838.14	ENST00000403325.5	1699	7	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_4	17.3148940382422	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGGCTTGAGGTGGGA	-9	True	NA	-8	True	AATAAA	-14	NA	19854843	19788414	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19820597_19820724_19821227_19821376_19854442
H1_mix_00059298	chr22	-	6523	3	FSM	ENSG00000215012.9	ENST00000407472.5	6523	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	45	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGGGCTTGTGTTTTCC	-15	True	NA	1	True	AATAAA	-24	NA	19854896	19846137	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19852487_19854442_19854540_19854819
H1_mix_00059300	chr22	-	1129	7	FSM	ENSG00000184470.21	ENST00000462330.5	1129	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_6	13.9164171634321	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCTCTGCCTGCGGTGT	17	False	NA	-5	True	AATAAA	-19	NA	19881369	19875521	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19875808_19877039_19877235_19878089_19878188_19878365_19878438_19880178_19880272_19880621_19880718_19881080
H1_mix_00059301	chr22	-	1086	9	FSM	ENSG00000184470.21	ENST00000634537.1	1086	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_7	29.0105045630027	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCTCTGCCTGCGGTGT	NA	False	NA	-5	True	AATAAA	-19	NA	19898041	19875521	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19875808_19877108_19877235_19878089_19878188_19878365_19878438_19880178_19880272_19880621_19880718_19883324_19883462_19895406_19895582_19898038
H1_mix_00059302	chr22	-	1937	18	FSM	ENSG00000184470.21	ENST00000400521.7	1941	18	4	0	4	0	multi-exon	FALSE	canonical	3	14	junction_7	23.9987023870662	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCTCTGCCTGCGGTGT	1	True	NA	-5	True	AATAAA	-19	NA	19941814	19875521	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19875808_19877039_19877235_19878089_19878188_19878365_19878438_19880178_19880272_19880621_19880718_19883324_19883462_19895406_19895582_19898038_19898131_19899048_19899069_19911376_19911448_19915213_19915277_19915764_19915844_19918142_19918218_19918859_19919005_19919542_19919600_19931029_19931099_19941700
H1_mix_00059303	chr22	-	5267	15	NIC	ENSG00000099889.14	novel	4056	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	102	junction_14	32.2968533249584	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTTGCTTTCTGCCAC	-8	True	NA	-33	True	ATTAAA	-11	NA	19987190	19969897	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_19970744_19971215_19971336_19971885_19971972_19972357_19972412_19972736_19972828_19972924_19973037_19973118_19973318_19973642_19973794_19974111_19974240_19975685_19975758_19977414_19977587_19977957_19978076_19978896_19981738_19981932_19982092_19987072
H1_mix_00059305	chr22	-	3958	19	NIC	ENSG00000099889.14	novel	4056	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_18	58.8867924155124	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTTGCTTTCTGCCAC	-4	True	NA	-33	True	ATTAAA	-11	NA	20016745	19969897	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_19970744_19971215_19971336_19971885_19971972_19972357_19972412_19972736_19972828_19972924_19973037_19973118_19973318_19973642_19973794_19974111_19974240_19975685_19975758_19977414_19977587_19977957_19978076_19978896_19979081_19979742_19980243_19981210_19981738_19981932_19982092_19990584_19990813_20010454_20010509_20016588
H1_mix_00059306	chr22	-	3279	17	NIC	ENSG00000099889.14	novel	4056	20	NA	NA	-385	624	combination_of_known_junctions	FALSE	canonical	3	26	junction_16	48.3647841280203	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCCTGCCCCCCCACCC	3078	False	NA	NA	False	NA	NA	NA	19984138	19970603	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_19970744_19971215_19971336_19971885_19971972_19972357_19972412_19972736_19972828_19972924_19973037_19973118_19973318_19973642_19973794_19974111_19974240_19975685_19975758_19977414_19977587_19977957_19978076_19978896_19979081_19979742_19980243_19981210_19981738_19981932_19982092_19983672
H1_mix_00059308	chr22	-	863	3	FSM	ENSG00000099889.14	ENST00000487793.5	863	3	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_2	44.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACAGAGTGCCCCACTT	-8	True	NA	NA	False	NA	NA	NA	19987190	19981151	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19981738_19981932_19982092_19987072
H1_mix_00059309	chr22	-	2888	12	FSM	ENSG00000099899.15	ENST00000252136.12	2886	12	0	-2	0	2	multi-exon	TRUE	canonical	3	135	junction_9	33.4942945678072	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGACAGTTTGCTTTAT	-7	True	NA	-8	True	AATAAA	-17	NA	20117226	20111872	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_20112795_20112910_20113008_20113117_20113235_20113431_20113508_20113685_20113809_20114573_20114686_20114760_20114877_20114964_20115080_20115265_20115448_20115671_20115781_20116037_20116613_20116882
H1_mix_00059310	chr22	-	2930	13	FSM	ENSG00000099899.15	ENST00000403707.7	2928	13	0	-2	0	2	multi-exon	FALSE	canonical	3	122	junction_12	38.3905370284571	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGACAGTTTGCTTTAT	8937	False	NA	-8	True	AATAAA	-17	NA	20117392	20111872	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_20112795_20112910_20113008_20113117_20113235_20113431_20113508_20113685_20113809_20114573_20114686_20114760_20114877_20114964_20115080_20115265_20115448_20115671_20115781_20116037_20116613_20116882_20116973_20117096
H1_mix_00059311	chr22	-	1563	8	ISM	ENSG00000099899.15	ENST00000252136.12	2886	12	1834	426	0	0	intron_retention	FALSE	canonical	3	171	junction_4	14.8708727767693	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGTTTCTGTGATGAGAG	6914	False	NA	NA	False	AATAAA	-16	NA	20115392	20112300	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_-_20112795_20112910_20113008_20113117_20113235_20113431_20113508_20113685_20113809_20114573_20114686_20114760_20114877_20114964
H1_mix_00059312	chr22	-	2483	12	FSM	ENSG00000099899.15	ENST00000439169.2	2473	12	0	-10	0	0	multi-exon	FALSE	canonical	3	10	junction_4	63.7581950655485	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCCAGAATAAACAACTGCT	-3	True	NA	NA	False	NA	NA	NA	20117222	20112327	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_20112795_20112910_20113008_20113117_20113235_20113431_20113562_20113685_20113809_20114573_20114686_20114760_20114877_20114964_20115080_20115265_20115448_20115671_20115781_20116037_20116613_20116882
H1_mix_00059313	chr22	-	1946	2	FSM	ENSG00000040608.14	ENST00000043402.8	1944	2	0	-2	0	2	multi-exon	FALSE	canonical	3	92	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCCTCTCAGGCTAGGG	-16	True	NA	-4	True	AATAAA	-18	NA	20268318	20241412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_20243111_20268070
H1_mix_00059314	chr22	-	1187	5	FSM	ENSG00000128185.10	ENST00000248879.8	1172	5	0	-15	0	15	multi-exon	FALSE	canonical	3	574	junction_2	41.9702275428666	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCACCTCTGTTGCAGCAG	-20	True	NA	40	True	NA	NA	NA	20320060	20314222	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_20314825_20315335_20315477_20316118_20316220_20319638_20319800_20319878
H1_mix_00059315	chr22	-	935	4	FSM	ENSG00000128185.10	ENST00000443409.1	935	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	293.456413572215	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCGCTTGTTCTGGTCTCA	875	False	NA	NA	False	NA	NA	NA	20320080	20314393	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_20314825_20315335_20315477_20319638_20319800_20319878
H1_mix_00059316	chr22	-	631	1	FSM	ENSG00000273343.1	ENST00000608275.1	631	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTACTGGGTCGTGCTGTA	2206	False	NA	NA	False	NA	NA	NA	20318749	20318118	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_20318100_20318700
H1_mix_00059317	chr22	-	443	2	FSM	ENSG00000235578.1	ENST00000458154.1	446	2	0	3	0	-3	multi-exon	FALSE	canonical	1	1	junction_1	0	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGCCTCCTTGACTATT	NA	False	NA	NA	False	AGTAAA	-12	NA	20344365	20343205	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_20343516_20344232
H1_mix_00059318	chr22	-	3468	11	FSM	ENSG00000244486.9	ENST00000622235.5	3463	11	0	-5	0	5	multi-exon	FALSE	canonical	3	34	junction_3	13.2517923316056	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCACTTCCTGTTTGCAG	-8	True	NA	2	True	AATAAA	-21	NA	20437825	20424578	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_20426283_20427397_20427551_20429224_20429341_20429535_20429654_20429729_20429834_20430428_20430558_20430689_20430909_20431017_20431538_20431744_20431847_20431929_20431989_20437581
H1_mix_00059319	chr22	-	2722	8	NIC	ENSG00000099910.17	novel	2528	7	NA	NA	279	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	15.2863818278805	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTAGCCACAGCCTCA	4580	False	NA	-7	True	AATAAA	-27	NA	20491278	20441518	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_20442439_20446442_20446677_20457807_20458001_20464857_20465577_20471349_20471516_20488984_20489245_20489767_20489853_20491133
H1_mix_00059320	chr22	-	2567	7	FSM	ENSG00000099910.17	ENST00000328879.9	2528	7	-39	0	10	0	multi-exon	FALSE	canonical	3	20	junction_4	7.47774475805818	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTAGCCACAGCCTCA	24	False	NA	-7	True	AATAAA	-27	NA	20495834	20441518	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_20442439_20446442_20446677_20457807_20458001_20464857_20465577_20471349_20471516_20488984_20489245_20495759
H1_mix_00059321	chr22	-	2535	7	NIC	ENSG00000099910.17	novel	2528	7	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	12.8927197372091	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTAGCCACAGCCTCA	24	False	NA	-7	True	AATAAA	-27	NA	20495834	20441518	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_20442439_20446442_20446677_20457807_20458001_20464857_20465577_20471349_20471516_20488984_20489213_20495759
H1_mix_00059323	chr22	-	451	2	FSM	ENSG00000229107.2	ENST00000411545.2	909	2	458	0	458	0	multi-exon	FALSE	canonical	3	98	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCAGCGCGCCTAGCG	NA	False	NA	NA	False	NA	NA	NA	20670526	20667835	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_20668221_20670460
H1_mix_00059324	chr22	-	6653	54	NIC	ENSG00000241973.11	novel	6751	55	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_25	46.2722222021572	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTGAGGTTTTGTGTC	586	False	20858825	-2	True	AATAAA	-24	NA	20858808	20707692	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_20708099_20709295_20709380_20709907_20709998_20710698_20710859_20711340_20711462_20712485_20712612_20712692_20712798_20713280_20713391_20714457_20714529_20714627_20714701_20717707_20717779_20718692_20718823_20721297_20721419_20726487_20726542_20727229_20727398_20727773_20727865_20729312_20729507_20729631_20729712_20729891_20730012_20732970_20733099_20733735_20733844_20734042_20734195_20734394_20734554_20742227_20742356_20742607_20742765_20747582_20747703_20749904_20749995_20751292_20751377_20751673_20751756_20752902_20753028_20753109_20753181_20761303_20761387_20764816_20764951_20765099_20765237_20765584_20765694_20793192_20793244_20796145_20796315_20798583_20798688_20799092_20799277_20799670_20799767_20801972_20802106_20803190_20803321_20804299_20804401_20804973_20805166_20807361_20807459_20810966_20811033_20813357_20813507_20818482_20818550_20819640_20819901_20820538_20820612_20824325_20824415_20834561_20834656_20838614_20838732_20858569
H1_mix_00059325	chr22	-	6749	55	FSM	ENSG00000241973.11	ENST00000255882.11	6751	55	0	2	0	0	multi-exon	FALSE	canonical	3	115	junction_4	41.2686504373032	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTGAGGTTTTGTGTC	583	False	20858825	-2	True	AATAAA	-24	NA	20858811	20707692	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_20708099_20709295_20709380_20709907_20709998_20710698_20710859_20711340_20711462_20712485_20712612_20712692_20712798_20713280_20713391_20714457_20714529_20714627_20714701_20717707_20717779_20718692_20718823_20721297_20721419_20726487_20726542_20727229_20727398_20727773_20727865_20729312_20729507_20729631_20729712_20729891_20730012_20732970_20733099_20733735_20733844_20734042_20734195_20734394_20734554_20742227_20742356_20742607_20742765_20744627_20744721_20747582_20747703_20749904_20749995_20751292_20751377_20751673_20751756_20752902_20753028_20753109_20753181_20761303_20761387_20764816_20764951_20765099_20765237_20765584_20765694_20793192_20793244_20796145_20796315_20798583_20798688_20799092_20799277_20799670_20799767_20801972_20802106_20803190_20803321_20804299_20804401_20804973_20805166_20807361_20807459_20810966_20811033_20813357_20813507_20818482_20818550_20819640_20819901_20820538_20820612_20824325_20824415_20834561_20834656_20838614_20838732_20858569
H1_mix_00059326	chr22	-	405	1	FSM	ENSG00000272829.1	ENST00000610278.1	395	1	-27	17	-27	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTGGGAGTCATACAGAT	434	False	NA	-27	True	NA	NA	NA	20981782	20981377	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_20981400_20981800
H1_mix_00059327	chr22	-	1957	3	FSM	ENSG00000184436.12	ENST00000498406.1	1957	3	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_2	8	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTCTCCCTGCCGAGGAG	29	True	NA	NA	False	NA	NA	NA	21001742	20999103	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21000433_21000646_21000788_21001255
H1_mix_00059328	chr22	-	1913	4	FSM	ENSG00000184436.12	ENST00000215742.9	1913	4	0	0	0	0	multi-exon	TRUE	canonical	3	137	junction_3	44.7908720859755	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTCTCCCTGCCGAGGAG	-7	True	NA	NA	False	NA	NA	NA	21002118	20999103	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21000433_21000646_21000788_21001255_21001412_21001831
H1_mix_00059329	chr22	-	1148	5	FSM	ENSG00000184436.12	ENST00000399133.2	1144	5	0	-4	0	0	multi-exon	FALSE	canonical	3	71	junction_4	67.8877750408717	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCTGCTGTCTGGCTCAG	NA	False	NA	-1	True	AATAAA	-17	NA	21002196	20999772	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21000433_21000646_21000788_21001255_21001412_21001831_21001912_21002085
H1_mix_00059330	chr22	-	1671	3	FSM	ENSG00000184436.12	ENST00000476667.5	1671	3	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_2	51	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGCCATAATAAAGCGGATT	5	True	NA	-30	True	NA	NA	NA	21002106	20999801	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21000433_21000646_21001412_21001831
H1_mix_00059332	chr22	-	1657	4	FSM	ENSG00000161149.12	ENST00000292748.7	1678	4	21	0	16	0	multi-exon	FALSE	canonical	2	3	junction_1	1.24721912892465	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTCCTACCGCCTTATA	3	True	NA	NA	False	NA	NA	NA	21014271	21008636	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21009454_21011383_21011591_21013041_21013185_21013781
H1_mix_00059333	chr22	-	1800	4	FSM	ENSG00000183506.17	ENST00000477296.5	1787	4	0	-13	0	4	multi-exon	FALSE	canonical	3	37	junction_2	66.6849974798597	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGGTTTTGTGTCAAGT	NA	False	NA	NA	False	AATAAA	-28	NA	21477217	21472995	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21473406_21474596_21474681_21475210_21475301_21476001
H1_mix_00059334	chr22	-	2350	18	NIC	ENSG00000183506.17	novel	2294	17	NA	NA	4	4	combination_of_known_junctions	FALSE	canonical	3	27	junction_11	70.9797963359242	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGGTTTTGTGTCAAGT	NA	False	NA	NA	False	AATAAA	-28	NA	21517477	21472995	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_21473406_21474596_21474681_21475210_21475301_21476001_21476161_21476643_21476765_21477789_21477916_21477996_21478102_21478584_21478695_21479758_21479830_21479929_21480003_21483019_21483091_21484004_21484135_21486799_21486928_21487564_21487673_21487871_21488024_21488223_21488382_21491993_21492095_21517324
H1_mix_00059335	chr22	-	1180	4	NIC	ENSG00000161179.14	novel	1410	5	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	69	junction_1	65.6370491584	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTGGTTTATCAGCTG	19	True	NA	0	True	AATAAA	-20	NA	21630012	21628088	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_21628788_21629307_21629408_21629542_21629762_21629850
H1_mix_00059336	chr22	-	1309	5	FSM	ENSG00000161179.14	ENST00000292778.11	1309	5	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_3	51.0538930934753	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTGGTTTATCAGCTG	9	True	NA	0	True	AATAAA	-20	NA	21630022	21628088	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21628788_21629009_21629188_21629307_21629408_21629601_21629762_21629850
H1_mix_00059337	chr22	-	1423	2	FSM	ENSG00000161179.14	ENST00000468686.5	1423	2	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTGGTTTATCAGCTG	0	True	NA	0	True	AATAAA	-20	NA	21630031	21628088	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21628788_21629307
H1_mix_00059338	chr22	-	1410	5	FSM	ENSG00000161179.14	ENST00000415762.6	1410	5	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_3	53.6400037285606	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTGGTTTATCAGCTG	-33	True	NA	0	True	AATAAA	-20	NA	21630064	21628088	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21628788_21629009_21629188_21629307_21629408_21629542_21629762_21629850
H1_mix_00059339	chr22	-	1396	4	FSM	ENSG00000161179.14	ENST00000482998.1	1388	4	0	-8	0	0	multi-exon	FALSE	canonical	3	112	junction_2	53.5433365498349	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAATAACGTGTGTCTT	17	True	NA	-25	True	NA	NA	NA	21630014	21628113	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21628788_21629009_21629408_21629601_21629762_21629850
H1_mix_00059340	chr22	-	1494	4	FSM	ENSG00000161179.14	ENST00000473985.1	1494	4	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_3	5.79271573232759	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAATAACGTGTGTCTT	-7	True	NA	-25	True	NA	NA	NA	21630038	21628113	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21628788_21629009_21629188_21629307_21629762_21629850
H1_mix_00059341	chr22	-	1329	4	ISM	ENSG00000161179.14	ENST00000292778.11	1309	5	-9	78	0	0	intron_retention	FALSE	canonical	3	112	junction_3	56.9229498728081	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGCAATGCAAACACCTTC	0	True	NA	-78	True	NA	NA	NA	21630031	21628166	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_-_21628788_21629009_21629188_21629307_21629408_21629601
H1_mix_00059343	chr22	-	4297	5	FSM	ENSG00000100027.17	ENST00000339468.8	4297	5	0	0	0	0	multi-exon	FALSE	canonical	2	49	junction_3	11.7553179455087	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTGCCCTCAGTGGACGAG	12	True	NA	-5	True	AATAAA	-24	NA	21735794	21697535	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21701219_21703369_21703479_21703838_21703883_21710627_21710909_21735614
H1_mix_00059344	chr22	-	5893	9	FSM	ENSG00000100030.15	ENST00000215832.11	5881	9	0	-12	0	12	multi-exon	FALSE	canonical	3	330	junction_1	78.9509341300025	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTAAATTTTGTTGTGAG	-4	True	NA	8	True	AGTAAA	-30	NA	21867645	21759644	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21764241_21769194_21769321_21772872_21772983_21788256_21788389_21788693_21788809_21799011_21799129_21805849_21806040_21807663_21807847_21867321
H1_mix_00059345	chr22	-	1509	8	FSM	ENSG00000100030.15	ENST00000398822.7	1487	8	0	-22	0	22	multi-exon	FALSE	canonical	3	382	junction_3	68.942448640078	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTCTCTCGTTTATTAGA	474	False	NA	5	True	ATTAAA	-36	NA	21867680	21769017	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21769321_21772872_21772983_21788256_21788389_21788693_21788809_21799011_21799129_21805849_21806040_21807663_21807847_21867321
H1_mix_00059346	chr22	-	574	1	FSM	ENSG00000225544.1	ENST00000435222.1	392	1	-201	19	-201	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGAGCACCCCTGAGCTG	1206	False	NA	NA	False	NA	NA	NA	21885874	21885300	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21885300_21885900
H1_mix_00059347	chr22	-	5156	8	FSM	ENSG00000100034.14	ENST00000263212.10	5149	8	0	-7	0	7	multi-exon	FALSE	canonical	3	137	junction_1	16.6034174008773	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGAGTCCTGCCTTCTTC	0	True	NA	-5	True	AATAAA	-22	NA	21952848	21919417	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21923472_21925568_21925663_21931147_21931292_21933390_21933580_21934023_21934227_21939531_21939681_21945842_21946109_21952791
H1_mix_00059348	chr22	-	1778	7	FSM	ENSG00000100034.14	ENST00000397495.8	1778	7	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	15.5071668019088	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTGGCTGGGCATGCT	17	True	NA	NA	False	AATAAA	-26	NA	21952831	21924875	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21925663_21931147_21931292_21933390_21933580_21934023_21934227_21939531_21939681_21945842_21946109_21952791
H1_mix_00059349	chr22	-	1245	8	NIC	ENSG00000100034.14	novel	1778	7	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	56.3885934333155	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTGGCTGGGCATGCT	10	True	NA	NA	False	AATAAA	-26	NA	21952838	21924875	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_21925029_21925568_21925663_21931147_21931292_21933390_21933580_21934023_21934227_21939531_21939681_21945842_21946109_21952791
H1_mix_00059350	chr22	-	3067	18	NIC	ENSG00000100038.20	novel	2834	18	NA	NA	-302	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_17	56.2028579849347	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGGCCCCTTTGCTGGT	6541	False	NA	NA	False	ATTAAA	-22	NA	21976271	21957024	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_21957596_21958491_21958694_21959131_21959233_21959586_21959737_21960320_21960450_21962428_21962603_21962746_21962894_21963922_21964029_21964160_21964316_21965284_21965376_21967602_21967717_21968618_21968776_21970209_21970407_21971876_21971952_21972611_21972719_21974356_21974489_21975639_21975808_21975980
H1_mix_00059351	chr22	-	3113	18	FSM	ENSG00000100038.20	ENST00000398793.6	3107	18	0	-6	0	0	multi-exon	FALSE	canonical	3	16	junction_17	58.3808638126876	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGGCCCCTTTGCTGGT	2	True	NA	NA	False	ATTAAA	-22	NA	21982750	21957024	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21957596_21958491_21958694_21959131_21959233_21959586_21959737_21960320_21960450_21962428_21962603_21962746_21962894_21963922_21964029_21964160_21964316_21965284_21965376_21967602_21967717_21968618_21968776_21970209_21970407_21971876_21971952_21972611_21972719_21974356_21974489_21975639_21975808_21982413
H1_mix_00059352	chr22	-	2895	19	NIC	ENSG00000100038.20	novel	2834	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	97	junction_14	46.2707077432551	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGGCCCCTTTGCTGGT	11	True	NA	NA	False	ATTAAA	-22	NA	21982766	21957024	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_21957596_21958491_21958694_21959131_21959233_21959586_21959737_21960320_21960450_21962428_21962603_21962746_21962894_21963922_21964029_21964160_21964316_21965284_21965376_21967602_21967717_21968618_21968776_21970209_21970407_21970979_21971062_21971876_21971952_21972611_21972719_21974356_21974489_21975639_21975808_21982729
H1_mix_00059353	chr22	-	2834	18	FSM	ENSG00000100038.20	ENST00000357179.10	2834	18	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_13	45.6548659181792	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGGCCCCTTTGCTGGT	-10	True	NA	NA	False	ATTAAA	-22	NA	21982787	21957024	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21957596_21958491_21958694_21959131_21959233_21959586_21959737_21960320_21960450_21962428_21962603_21962746_21962894_21963922_21964029_21964160_21964316_21965284_21965376_21967602_21967717_21968618_21968776_21970209_21970407_21971876_21971952_21972611_21972719_21974356_21974489_21975639_21975808_21982729
H1_mix_00059354	chr22	-	4039	18	NIC	ENSG00000100038.20	novel	4163	17	NA	NA	-302	0	intron_retention	FALSE	canonical	3	29	junction_17	57.1436603996929	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGAGCTGGGGCCCCTTT	6541	False	NA	NA	False	ATTAAA	-16	NA	21976271	21957030	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_21958694_21959131_21959233_21959586_21959737_21960320_21960450_21962428_21962603_21962746_21962894_21963922_21964029_21964160_21964316_21965284_21965376_21967602_21967717_21968618_21968776_21970209_21970407_21970979_21971062_21971876_21971952_21972611_21972719_21974356_21974489_21975639_21975808_21975980
H1_mix_00059355	chr22	-	624	2	FSM	ENSG00000100038.20	ENST00000470338.1	624	2	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGACTCATAGAAATCATAT	NA	False	NA	NA	False	NA	NA	NA	21962895	21962127	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21962603_21962746
H1_mix_00059357	chr22	-	400	2	FSM	ENSG00000100038.20	ENST00000442653.1	400	2	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCAGTGCGCTTCAAGA	6843	False	NA	NA	False	NA	NA	NA	21975969	21974418	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21974489_21975639
H1_mix_00059359	chr22	-	795	1	FSM	ENSG00000228050.1	ENST00000420768.1	1380	1	668	-83	668	83	mono-exon	FALSE	NA	NA	NA	NA	NA	183	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGAGCTGGGGCCCCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	22223898	22223103	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_22223100_22223900
H1_mix_00059360	chr22	-	5310	4	FSM	ENSG00000275004.4	ENST00000626650.3	5309	4	0	-1	0	1	multi-exon	FALSE	canonical	3	12	junction_2	2.05480466765633	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGCTGTATTGTTTTT	32	True	NA	NA	False	AATAAA	-19	NA	22508742	22484419	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_22489467_22494062_22494181_22507809_22507871_22508658
H1_mix_00059363	chr22	-	1176	7	FSM	ENSG00000100218.12	ENST00000216036.9	1188	7	12	0	12	0	multi-exon	FALSE	canonical	0	0	junction_3	1.5723301886761	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGGGTCCGAATGGCACT	99	False	NA	0	True	AATAAA	-18	NA	23141978	23059414	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_23059719_23061808_23061946_23063901_23064134_23134025_23134145_23138839_23138943_23140221_23140473_23141948
H1_mix_00059364	chr22	-	248	1	FSM	ENSG00000240160.3	ENST00000467969.3	290	1	39	3	39	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	217	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTTTAAAAATAACTATC	NA	False	NA	NA	False	NA	NA	NA	23262032	23261784	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_23261800_23262000
H1_mix_00059365	chr22	-	2124	2	FSM	ENSG00000234353.2	ENST00000430707.2	906	2	-1213	-5	-1213	5	multi-exon	FALSE	canonical	3	12	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTCCCTCTCTTCATT	NA	False	NA	1	True	AATAAA	-20	NA	23641975	23638486	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_23638943_23640307
H1_mix_00059366	chr22	-	583	5	FSM	ENSG00000228315.12	ENST00000423913.5	584	5	0	1	0	-1	multi-exon	FALSE	canonical	2	7	junction_4	18.7616630392937	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACGAACCCTGCAGCCCCA	NA	False	NA	NA	False	NA	NA	NA	23690293	23652860	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_23652945_23659864_23660001_23683724_23683868_23686837_23686996_23690231
H1_mix_00059367	chr22	-	2921	11	NIC	ENSG00000228315.12	novel	3041	12	NA	NA	10	4	intron_retention	FALSE	canonical	2	10	junction_1	12.7514705034361	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCTTGACCTCTTCTCTC	35	False	NA	-1	True	NA	NA	NA	23717311	23653164	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_23653353_23659864_23660001_23683724_23683868_23690231_23690357_23694118_23695518_23705428_23705542_23709129_23709242_23709785_23709868_23714186_23714343_23715008_23715195_23717030
H1_mix_00059368	chr22	-	4864	3	FSM	ENSG00000272578.5	ENST00000417194.5	5004	3	0	140	0	-140	multi-exon	FALSE	canonical	3	21	junction_2	17	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATACTTGTTAGGCTGAG	NA	False	NA	NA	False	AATACA	-38	NA	23693185	23658233	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_23660001_23683724_23683868_23690231
H1_mix_00059369	chr22	-	6798	2	FSM	ENSG00000187792.5	ENST00000341976.5	6940	2	144	-2	144	2	multi-exon	FALSE	canonical	3	6	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTTAATAGTGATATAT	13	True	NA	-6	True	AATAAA	-23	NA	23750968	23738679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_23745220_23750710
H1_mix_00059370	chr22	-	693	4	FSM	ENSG00000250479.9	ENST00000401675.7	691	4	0	-2	0	2	multi-exon	TRUE	canonical	3	5	junction_2	269.579095793589	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTGTGTGCCTCTCTCGA	7	True	NA	-1	True	ATTAAA	-21	NA	23767942	23765831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_23766027_23766127_23766297_23767373_23767594_23767833
H1_mix_00059371	chr22	-	702	4	FSM	ENSG00000250479.9	ENST00000484558.3	700	4	0	-2	0	2	multi-exon	FALSE	canonical	3	519	junction_3	46.5212018570267	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTGTGTGCCTCTCTCGA	-23	True	NA	-1	True	ATTAAA	-21	NA	23767972	23765831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_23766027_23766127_23766276_23767373_23767594_23767833
H1_mix_00059372	chr22	-	1063	7	FSM	ENSG00000099958.15	ENST00000406855.7	1063	7	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	21.4786715914493	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGACCTGTTGCCTTTTAT	-6	True	NA	-5	True	AAGAAA	-29	NA	23839006	23834502	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_23834933_23837063_23837155_23837658_23837855_23838351_23838446_23838563_23838638_23838710_23838777_23838894
H1_mix_00059373	chr22	-	3093	7	FSM	ENSG00000099958.15	ENST00000318109.12	3093	7	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	25.0044440494529	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGACCTGTTGCCTTTTAT	-6	True	NA	-5	True	AAGAAA	-29	NA	23839006	23834502	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_23836963_23837063_23837155_23837658_23837855_23838351_23838446_23838563_23838638_23838710_23838777_23838894
H1_mix_00059375	chr22	-	1482	1	FSM	ENSG00000244425.3	ENST00000491172.3	298	1	-86	-1098	-86	1098	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAACCAGCAGCTGAACC	NA	False	NA	NA	False	NA	NA	NA	23879876	23878394	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_23878400_23879900
H1_mix_00059376	chr22	-	4803	1	FSM	ENSG00000273295.1	ENST00000609510.1	5637	1	555	279	555	-279	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCCACGGCAATACCCAAAA	7502	False	NA	NA	False	NA	NA	NA	23906513	23901710	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_23901700_23906500
H1_mix_00059377	chr22	-	570	3	FSM	ENSG00000099977.15	ENST00000398344.9	565	3	0	-5	0	0	multi-exon	FALSE	canonical	3	616	junction_2	53	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTACCTTCTATTATCT	5493	False	NA	-13	True	AATAAA	-29	NA	23974441	23971364	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_23971624_23973767_23973944_23974306
H1_mix_00059378	chr22	-	3435	6	FSM	ENSG00000138867.17	ENST00000435822.6	3435	6	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	22.6980175345778	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTAGCCCCTGGCTGG	4	True	NA	-7	True	AATAAA	-20	NA	24555138	24540437	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_24543098_24543841_24544084_24546913_24547006_24547907_24548074_24548916_24549002_24554948
H1_mix_00059379	chr22	-	3397	5	NIC	ENSG00000138867.17	novel	3435	6	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_4	81.4812094902868	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTAGCCCCTGGCTGG	-43	True	NA	-7	True	AATAAA	-20	NA	24555185	24540437	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_24543098_24543841_24544084_24546913_24547006_24547907_24548074_24554948
H1_mix_00059380	chr22	-	1606	6	FSM	ENSG00000138867.17	ENST00000404664.7	1606	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	67.5822461893654	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGCAGAGCCCTGGCCG	-4	True	NA	NA	False	NA	NA	NA	24555935	24542397	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_24543098_24543841_24544084_24546913_24547006_24547907_24548074_24548916_24549002_24555614
H1_mix_00059383	chr22	-	1832	5	FSM	ENSG00000178026.13	ENST00000446942.5	1828	5	2	-6	0	6	multi-exon	TRUE	canonical	0	0	junction_2	57.9929952666699	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCAGGGTCACTGAGCAA	4	True	NA	1	True	AATAAA	-35	NA	24593064	24585613	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_24586412_24588213_24588330_24588678_24589266_24589820_24589950_24592862
H1_mix_00059384	chr22	-	1254	4	FSM	ENSG00000178026.13	ENST00000318753.13	1233	4	0	-21	0	6	multi-exon	FALSE	canonical	0	0	junction_3	58.2466021898846	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCAGGGTCACTGAGCAA	-5	True	NA	1	True	AATAAA	-35	NA	24593073	24585613	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_24586412_24588213_24588330_24589820_24589950_24592862
H1_mix_00059385	chr22	-	2964	4	FSM	ENSG00000178026.13	ENST00000491910.5	2943	4	0	-21	0	6	multi-exon	FALSE	canonical	3	24	junction_2	49.8263651761461	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCAGGGTCACTGAGCAA	-5	True	NA	1	True	AATAAA	-35	NA	24593073	24585613	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_24586412_24588213_24589394_24589820_24589950_24592216
H1_mix_00059386	chr22	-	2102	6	NIC	ENSG00000178026.13	novel	1417	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	59.337677743572	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGACACCCGCCTCTGC	34	False	NA	-34	True	NA	NA	NA	24593034	24585648	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_24586412_24588213_24588330_24588678_24589394_24589820_24589950_24592216_24592424_24592862
H1_mix_00059388	chr22	-	1417	5	FSM	ENSG00000178026.13	ENST00000404045.6	1417	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	52.6705562909677	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGACACCCGCCTCTGC	4	True	NA	-34	True	NA	NA	NA	24593064	24585648	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_24586412_24588213_24588330_24589820_24589950_24592216_24592424_24592862
H1_mix_00059392	chr22	-	597	2	FSM	ENSG00000282012.1	ENST00000633827.1	597	2	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	0	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	16	True	NA	-1	True	AATAAA	-22	NA	24696003	24691121	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_24691562_24695846
H1_mix_00059393	chr22	-	920	4	NNC	ENSG00000233577.6	novel	426	3	NA	NA	-405	-862	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.46337971105226	62	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGTTTATTTTGCTTC	NA	False	NA	NA	False	AATAAA	-13	NA	25283079	25280390	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_25280823_25281256_25281386_25282030_25282292_25282981
H1_mix_00059394	chr22	-	780	1	FSM	ENSG00000231466.2	ENST00000434827.1	780	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGAGACTGTTATCACCC	NA	False	NA	NA	False	NA	NA	NA	25350322	25349542	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_25349500_25350300
H1_mix_00059395	chr22	-	1888	7	NIC	ENSG00000100068.14	novel	1676	8	NA	NA	-32	15	combination_of_known_junctions	FALSE	canonical	2	8	junction_6	7.26674311886388	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCTTGTGTGAATGTGAA	-18	True	NA	NA	False	NA	NA	NA	25405409	25351402	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_25351903_25354595_25354813_25357254_25357427_25359826_25360224_25375812_25376009_25381380_25381579_25405201
H1_mix_00059396	chr22	-	1818	7	FSM	ENSG00000100068.14	ENST00000444995.7	1714	7	-104	0	-104	0	multi-exon	FALSE	canonical	1	5	junction_1	8.74960316560446	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAGACGATTATAATGAG	NA	False	NA	NA	False	ATTAAA	-24	NA	25405481	25351456	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_25351815_25354595_25354813_25357254_25357427_25359826_25360224_25375812_25376009_25381380_25381579_25405201
H1_mix_00059397	chr22	-	471	4	FSM	ENSG00000100099.21	ENST00000519774.5	471	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	70.3436011462466	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATCTAAGGA	2209	False	NA	NA	False	NA	NA	NA	26464015	26443422	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_26443553_26457858_26457968_26458444_26458578_26463916
H1_mix_00059398	chr22	-	5066	14	FSM	ENSG00000100099.21	ENST00000398145.7	5066	14	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_13	28.2379994933178	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTTTAACTGACTCACAG	10	True	NA	NA	False	AATAAA	-35	NA	26483783	26450881	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_26453405_26457858_26457968_26458444_26458578_26463916_26464827_26465454_26465552_26466225_26466263_26468550_26468624_26470718_26470814_26472301_26472419_26472831_26472940_26476992_26477137_26479264_26479356_26481721_26482241_26483673
H1_mix_00059399	chr22	-	3794	14	NIC	ENSG00000100099.21	novel	5066	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_13	35.5146440335308	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGCATTTTTTTGTGAC	10	True	NA	-20	True	AATAAA	-36	NA	26483783	26452082	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_26453405_26457858_26457968_26458444_26458578_26463916_26464827_26465454_26465552_26466225_26466263_26468550_26468624_26470718_26470814_26472301_26472419_26472831_26472940_26476992_26477137_26479264_26479356_26481721_26482241_26483744
H1_mix_00059400	chr22	-	3786	14	FSM	ENSG00000100099.21	ENST00000336873.9	3786	14	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_13	25.3624611950383	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGCATTTTTTTGTGAC	-2	True	NA	-20	True	AATAAA	-36	NA	26483795	26452082	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_26453405_26457858_26457968_26458444_26458578_26463916_26464827_26465454_26465552_26466225_26466263_26468550_26468624_26470718_26470814_26472301_26472419_26472831_26472940_26476992_26477137_26479264_26479356_26481721_26482241_26483764
H1_mix_00059401	chr22	-	3972	15	NIC	ENSG00000100099.21	novel	5066	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_5	42.2925308212373	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGCATTTTTTTGTGAC	16	False	NA	-20	True	AATAAA	-36	NA	26483836	26452082	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_26453405_26457858_26457968_26458444_26458578_26463916_26464827_26465454_26465552_26466050_26466105_26466225_26466263_26468550_26468624_26470718_26470814_26472301_26472419_26472831_26472940_26476992_26477137_26479264_26479356_26481721_26482241_26483673
H1_mix_00059402	chr22	-	4046	15	NIC	ENSG00000100099.21	novel	5066	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_14	46.9020364206946	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGCATTTTTTTGTGAC	16	False	NA	-20	True	AATAAA	-36	NA	26483836	26452082	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_26453405_26457858_26457968_26458444_26458578_26463916_26464827_26465454_26465552_26466225_26466263_26468550_26468624_26470718_26470814_26472301_26472419_26472831_26472940_26476992_26477137_26479264_26479356_26481721_26482241_26482745_26482874_26483673
H1_mix_00059404	chr22	-	6135	13	FSM	ENSG00000100099.21	ENST00000466781.5	6136	13	1	0	0	0	multi-exon	FALSE	canonical	3	25	junction_12	36.8995445620795	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGCATTTTTTTGTGAC	16	False	NA	-20	True	AATAAA	-36	NA	26483836	26452082	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_26453405_26457858_26457968_26458444_26458578_26463916_26464827_26465454_26465552_26466225_26468624_26470718_26470814_26472301_26472419_26472831_26472940_26476992_26477137_26479264_26479356_26481721_26482241_26483744
H1_mix_00059410	chr22	-	3554	15	FSM	ENSG00000100109.17	ENST00000407690.6	3539	15	0	-15	0	0	multi-exon	TRUE	canonical	3	118	junction_10	17.3193297697535	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATAGCTTTCTGGAACAC	-4	True	NA	NA	False	AATAAA	-36	NA	26512473	26491224	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_26492369_26494138_26494305_26494796_26494940_26496072_26496317_26496720_26496890_26498868_26498976_26499103_26499632_26501899_26502053_26503665_26503794_26506302_26506460_26506774_26506929_26510063_26510282_26510616_26510703_26512098_26512176_26512393
H1_mix_00059411	chr22	-	2873	16	FSM	ENSG00000100109.17	ENST00000405938.5	2896	16	23	0	2	0	multi-exon	FALSE	canonical	3	17	junction_14	50.0309237705375	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGCCCCTAAGAGGGAT	-7	True	NA	-60	True	NA	NA	NA	26512476	26491985	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_26492369_26494138_26494305_26494796_26494940_26496072_26496317_26496720_26496890_26498868_26498976_26499103_26499632_26501899_26502053_26503665_26503794_26506302_26506460_26506774_26506929_26510063_26510282_26510616_26510703_26511118_26511196_26512098_26512176_26512393
H1_mix_00059413	chr22	-	5658	7	FSM	ENSG00000128294.16	ENST00000338754.9	5653	7	0	-5	0	5	multi-exon	FALSE	canonical	3	357	junction_6	38.1910402523361	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTCATCAGGATGTATG	-21	True	NA	-7	True	AATAAA	-23	NA	26590132	26521990	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_26526268_26528213_26528263_26532694_26532746_26536287_26536487_26540788_26541719_26544603_26544676_26590052
H1_mix_00059414	chr22	-	613	2	FSM	ENSG00000128294.16	ENST00000445720.1	675	2	0	62	0	-62	multi-exon	FALSE	canonical	3	455	junction_1	0	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCAAGTCTTTGTTGAGA	NA	False	NA	NA	False	NA	NA	NA	26540871	26535956	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_26536487_26540788
H1_mix_00059415	chr22	-	1041	6	FSM	ENSG00000100122.7	ENST00000647684.1	1041	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	9.01997782702375	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGCCTGTTATGTGAG	0	True	NA	-1	True	AATAAA	-22	NA	26618027	26599277	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_26599674_26601878_26602022_26607888_26608022_26612071_26612191_26616139_26616339_26617976
H1_mix_00059416	chr22	-	246	1	FSM	ENSG00000226912.1	ENST00000425548.1	448	1	101	101	101	-101	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTTCAGCCAAGAACTGA	2929	False	NA	NA	False	NA	NA	NA	26645235	26644989	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_26645000_26645200
H1_mix_00059417	chr22	-	1313	3	NNC	ENSG00000227838.1	novel	819	5	NA	NA	-30152	801	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	3.5	147	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCGTGGAAAGGTCTTAC	5657	False	NA	-33	True	ATTAAA	-19	NA	27745122	27675757	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_27676208_27697590_27697702_27744370
H1_mix_00059418	chr22	-	1228	2	Antisense	novelGene_ENSG00000226169.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	21	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAAAGGTCTTACCTCTT	5636	False	NA	-28	True	ATTAAA	-24	NA	27745143	27675752	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr22_-_27676208_27744370
H1_mix_00059419	chr22	-	1669	5	NNC	ENSG00000227838.1	novel	819	5	NA	NA	-30152	799	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	7.03562363973514	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAGCGTGGAAAGGTCTT	5657	False	NA	-35	True	ATTAAA	-17	NA	27745122	27675759	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_27676208_27677333_27677526_27689719_27689886_27697590_27697702_27744370
H1_mix_00059420	chr22	-	7791	2	FSM	ENSG00000169184.6	ENST00000302326.5	7814	2	23	0	23	0	multi-exon	FALSE	canonical	3	18	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTATATTTGTGGGTG	9	True	NA	-9	True	AATAAA	-18	NA	27801733	27748276	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_27751097_27796762
H1_mix_00059421	chr22	-	2902	12	FSM	ENSG00000180957.19	ENST00000335272.10	2914	12	12	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	255.754983470993	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTGCTTGAGTGGTTG	2	True	NA	-1	True	AATAAA	-19	NA	27919244	27851668	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_27853664_27854853_27854940_27858386_27858510_27860130_27860242_27873737_27873816_27894554_27894639_27896551_27896627_27897129_27897138_27897800_27897893_27910963_27911110_27914316_27914348_27919171
H1_mix_00059422	chr22	-	2827	11	FSM	ENSG00000180957.19	ENST00000320996.14	2826	11	0	-1	0	0	multi-exon	FALSE	canonical	0	0	junction_6	312.237665889303	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTGCTTGAGTGGTTG	-9	True	NA	-1	True	AATAAA	-19	NA	27919255	27851668	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_27853664_27858386_27858510_27860130_27860242_27873737_27873816_27894554_27894639_27896551_27896627_27897129_27897138_27897800_27897893_27910963_27911110_27914316_27914348_27919171
H1_mix_00059423	chr22	-	1017	12	FSM	ENSG00000180957.19	ENST00000634017.1	1017	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	300.319251618277	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCAGATGTGTGCTTGT	938	False	NA	NA	False	NA	NA	NA	27919199	27853578	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_27853664_27854853_27854940_27858386_27858510_27860130_27860242_27873737_27873816_27894554_27894639_27896551_27896627_27897129_27897138_27897800_27897893_27910963_27911110_27914316_27914348_27919101
H1_mix_00059424	chr22	-	770	8	FSM	ENSG00000180957.19	ENST00000477861.1	786	8	16	0	16	0	multi-exon	FALSE	canonical	0	0	junction_6	286.565232805833	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGATGTCTAGATGAGT	NA	False	NA	NA	False	NA	NA	NA	27898057	27854905	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_27854940_27858386_27858510_27860130_27860242_27873737_27873816_27894554_27894639_27896551_27896627_27897129_27897138_27897800
H1_mix_00059430	chr22	-	6285	3	FSM	ENSG00000100154.15	ENST00000480563.1	407	3	-140	-5738	-140	0	multi-exon	TRUE	canonical	3	42	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTGTATCTGGATCACTT	NA	False	NA	-1	True	ATTAAA	-23	NA	27990216	27978013	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_27983852_27985248_27985357_27989877
H1_mix_00059431	chr22	-	11752	23	FSM	ENSG00000100154.15	ENST00000397906.7	11770	23	18	0	-10	0	multi-exon	FALSE	canonical	3	25	junction_10	6.12676016199791	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTGTATCTGGATCACTT	NA	False	NA	-1	True	ATTAAA	-23	NA	28679822	27978013	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_27983852_27985248_27985357_27989877_27990008_27990788_27990813_27992586_27992664_27993286_27993519_27996134_27996260_27998539_27999261_28001373_28001554_28014247_28014393_28030225_28030367_28094079_28094246_28096189_28096409_28098914_28099045_28101170_28101281_28105278_28105803_28107061_28108404_28163091_28163600_28296197_28296329_28297579_28297853_28306495_28306644_28629551_28629831_28679621
H1_mix_00059432	chr22	-	724	4	FSM	ENSG00000100154.15	ENST00000490475.1	724	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	17.5941909605289	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCAAAGATCGAGAGGTAG	583	False	NA	NA	False	NA	NA	NA	28443073	28296213	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_28296329_28297579_28297853_28306495_28306644_28442885
H1_mix_00059433	chr22	-	1844	15	FSM	ENSG00000183765.23	ENST00000404276.6	1844	15	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_14	98.0335219635173	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTGCTTCTGCTTGAT	1	True	NA	-2	True	ATTAAA	-18	NA	28741820	28687742	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28724976_28725125_28725242_28725368_28734402_28734728_28741768
H1_mix_00059434	chr22	-	1985	16	FSM	ENSG00000183765.23	ENST00000382580.6	1971	16	0	-14	0	0	multi-exon	FALSE	canonical	3	32	junction_14	188.991169693778	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGGCTTTGTGCTTCTG	-17	True	NA	-8	True	ATTAAA	-12	NA	28741838	28687748	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28724976_28725125_28725242_28725368_28730419_28730549_28734402_28734728_28741768
H1_mix_00059435	chr22	-	1580	13	FSM	ENSG00000183765.23	ENST00000433728.5	1580	13	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	164.231776428586	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGAACACGAAAGAAATGTA	7686	False	NA	-68	True	NA	NA	NA	28734721	28687886	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28710005_28710060_28711908_28712018_28719394_28719486_28724976_28725125_28725242_28725368_28734402
H1_mix_00059437	chr22	-	1849	6	NNC	ENSG00000100219.17	novel	1131	6	NA	NA	0	13230	intron_retention	FALSE	non_canonical	0	0	junction_1	665.86503136897	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAAACGAATACACTTT	38	False	NA	NA	False	AAAACA	-10	NA	28800558	28781324	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_28781368_28794559_28795733_28796046_28796193_28797076_28797206_28799056_28799154_28800297
H1_mix_00059438	chr22	-	1850	5	FSM	ENSG00000100219.17	ENST00000216037.10	1850	5	0	0	0	0	multi-exon	FALSE	canonical	3	1611	junction_3	33.2640947569598	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGATTTCTTCTAGG	-1	True	NA	-8	True	ATTAAA	-18	NA	28800597	28794554	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_28795733_28796046_28796193_28797076_28797206_28799056_28799154_28800297
H1_mix_00059439	chr22	-	2177	2	FSM	ENSG00000100219.17	ENST00000484256.1	2173	2	0	-4	0	0	multi-exon	FALSE	canonical	3	1674	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGATTTCTTCTAGG	3551	False	NA	-8	True	ATTAAA	-18	NA	28797045	28794554	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_28795733_28796046
H1_mix_00059440	chr22	-	1796	6	FSM	ENSG00000100219.17	ENST00000344347.5	1131	6	-45	-620	0	0	multi-exon	TRUE	non_canonical	3	136	junction_2	611.524194124811	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGATTTCTTCTAGG	-2	True	NA	-8	True	ATTAAA	-18	NA	28800569	28794554	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_28795733_28796046_28796122_28796147_28796193_28797076_28797206_28799056_28799154_28800297
H1_mix_00059441	chr22	-	1826	5	FSM	ENSG00000100219.17	ENST00000403532.7	1824	5	0	-2	0	0	multi-exon	FALSE	canonical	3	13	junction_3	722.118584444411	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGATTTCTTCTAGG	38	False	NA	-8	True	ATTAAA	-18	NA	28800558	28794554	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_28795733_28796046_28796193_28797076_28797206_28799041_28799154_28800297
H1_mix_00059443	chr22	-	1097	5	Intergenic	novelGene_855	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	7.01338006955277	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCACACTGTCTTCATTG	119	False	NA	-5	True	ATTAAA	-23	NA	29205703	29180263	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_-_29180664_29183171_29183382_29186196_29186289_29205159_29205322_29205470
H1_mix_00059444	chr22	-	1800	7	FSM	ENSG00000100263.14	ENST00000216085.12	1777	7	0	-23	0	23	multi-exon	FALSE	canonical	3	331	junction_4	95.0911843092373	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTTTGACTCTTCTGT	-5	True	NA	-3	True	AATAAA	-42	NA	29267981	29259848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_29260238_29260325_29260614_29260701_29260865_29263834_29264219_29265478_29265669_29267425_29267578_29267747
H1_mix_00059445	chr22	-	1463	3	FSM	ENSG00000100276.10	ENST00000216101.7	1431	3	-34	2	-34	-2	multi-exon	FALSE	canonical	2	15	junction_2	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCGCCTGGGATTTCTG	NA	False	NA	NA	False	AATAAA	-15	NA	29315731	29312934	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_29313569_29313862_29313988_29315027
H1_mix_00059446	chr22	-	1746	2	FSM	ENSG00000100276.10	ENST00000401450.3	1720	2	-25	-1	-20	1	multi-exon	FALSE	canonical	3	15	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGCCTGGGATTTCTGGGC	5	True	NA	NA	False	AATAAA	-18	NA	29315717	29312931	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_29313988_29315027
H1_mix_00059447	chr22	-	4146	21	FSM	ENSG00000100280.17	ENST00000432560.6	4146	21	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_9	32.125184824371	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGTCCCCAGCCAGTG	15	False	29388598	0	True	AATAAA	-13	NA	29388583	29327681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_29328896_29330377_29330533_29330622_29330710_29331448_29331534_29331786_29331917_29334264_29334411_29338989_29339134_29340655_29340858_29341500_29341761_29342284_29342384_29349217_29349384_29350034_29350151_29351170_29351267_29351704_29351826_29354649_29354872_29356425_29356617_29358725_29358972_29359823_29359960_29363000_29363107_29367206_29367271_29388423
H1_mix_00059448	chr22	-	3903	21	FSM	ENSG00000100280.17	ENST00000317368.11	3903	21	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	98.1407662493013	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGGCAATCACGGACACT	15	False	29388598	-32	True	AATAAA	-13	NA	29388583	29327864	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_29328896_29330377_29330533_29330622_29330710_29331448_29331534_29331786_29331917_29334264_29334351_29338989_29339134_29340655_29340858_29341500_29341761_29342284_29342384_29349217_29349384_29350034_29350151_29351170_29351267_29351704_29351826_29354649_29354872_29356425_29356617_29358725_29358972_29359823_29359960_29363000_29363107_29367206_29367271_29388423
H1_mix_00059449	chr22	-	4595	20	FSM	ENSG00000100296.14	ENST00000490103.6	4728	20	0	133	0	-133	multi-exon	FALSE	canonical	3	60	junction_19	57.6151142066173	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCGCGCCTGTAATCCCA	-27	True	NA	NA	False	AATACA	-20	NA	29553757	29506011	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_29508521_29511105_29511297_29512020_29512137_29517028_29517117_29517262_29517367_29519005_29519121_29520007_29520105_29520997_29521100_29525837_29525947_29528077_29528178_29528425_29528467_29529161_29529240_29531830_29531964_29536623_29536739_29539329_29539477_29542858_29542957_29543428_29543543_29544459_29544604_29549051_29549159_29553670
H1_mix_00059450	chr22	-	2676	21	FSM	ENSG00000100296.14	ENST00000397872.5	2676	21	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_20	61.3722249881817	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTTGTCTACGCACACC	-4	True	NA	-2	True	AATAAA	-42	NA	29553655	29508167	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_29508521_29511105_29511297_29512020_29512137_29517028_29517117_29517262_29517367_29519005_29519121_29520007_29520105_29520997_29521100_29525837_29525947_29528077_29528178_29528425_29528467_29529161_29529240_29531830_29531964_29536623_29536739_29539329_29539477_29542858_29542957_29543428_29543543_29544459_29544604_29549051_29549159_29550727_29550844_29553447
H1_mix_00059451	chr22	-	2560	20	FSM	ENSG00000100296.14	ENST00000397871.5	2560	20	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_19	54.6223498948301	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTTGTCTACGCACACC	-4	True	NA	-2	True	AATAAA	-42	NA	29553655	29508167	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_29508521_29511105_29511297_29512020_29512137_29517028_29517117_29517262_29517367_29519005_29519121_29520007_29520105_29520997_29521100_29525837_29525947_29528077_29528178_29528425_29528467_29529161_29529240_29531830_29531964_29536623_29536739_29539329_29539477_29542858_29542957_29543428_29543543_29544459_29544604_29549051_29549159_29553447
H1_mix_00059452	chr22	-	2198	20	NNC	ENSG00000100296.14	novel	4728	20	NA	NA	0	0	intron_retention	FALSE	canonical	2	7	junction_10	83.8992272456068	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGGCCTTTGTCTGTGG	7489	False	NA	-18	True	ATTAAA	-14	NA	29553680	29508328	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_29508521_29511105_29511297_29512020_29512137_29517028_29517117_29517262_29517367_29519005_29519121_29520007_29520105_29520997_29521100_29525837_29525947_29528077_29528175_29528425_29528467_29529161_29529240_29531830_29531964_29536623_29536739_29539329_29539477_29542858_29542957_29543428_29543543_29544459_29544604_29549051_29549159_29553670
H1_mix_00059453	chr22	-	2374	21	FSM	ENSG00000100296.14	ENST00000397873.6	2374	21	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_20	70.8387429306873	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACCAGCCAATTAAAAAGC	-36	True	NA	-47	True	NA	NA	NA	29553766	29508357	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_29508521_29511105_29511297_29512020_29512137_29517028_29517117_29517262_29517367_29519005_29519121_29520007_29520105_29520997_29521100_29525837_29525947_29528077_29528178_29528425_29528467_29529161_29529240_29531830_29531964_29536623_29536739_29539329_29539477_29542858_29542957_29543428_29543543_29544459_29544604_29549051_29549159_29550727_29550844_29553670
H1_mix_00059455	chr22	-	3054	10	FSM	ENSG00000184117.12	ENST00000216121.12	2013	10	0	-1041	0	1041	multi-exon	FALSE	canonical	3	1738	junction_4	173.270358930634	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCCTTACTTCCGGTTC	-12	True	NA	NA	False	NA	NA	NA	29581113	29553766	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_29556000_29558869_29558954_29560733_29560829_29561170_29561203_29561505_29561647_29561791_29561863_29569192_29569288_29570161_29570208_29570404_29570533_29580984
H1_mix_00059457	chr22	-	951	6	FSM	ENSG00000100319.13	ENST00000344318.4	945	6	0	-6	0	6	multi-exon	FALSE	canonical	3	100	junction_5	43.4722900247963	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTGTTTCCCTACACT	-32	True	NA	-17	True	TATAAA	-24	NA	29767007	29730949	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_29731355_29738329_29738442_29740649_29740731_29742417_29742481_29748417_29748572_29766871
H1_mix_00059458	chr22	-	951	7	NNC	ENSG00000100319.13	novel	945	6	NA	NA	33	1	at_least_one_novel_splicesite	TRUE	canonical	3	10	junction_6	90.3726851555392	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTGGCTGTGTTTCCCT	1	True	NA	-22	True	TATAAA	-19	NA	29766974	29730954	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_29731355_29738329_29738442_29740649_29740731_29742417_29742481_29748417_29748572_29754748_29754864_29766948
H1_mix_00059459	chr22	-	857	6	NIC	ENSG00000100319.13	novel	945	6	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_5	57.7047658343745	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTCTGGCTGTGTTTCCC	-21	True	NA	-23	True	TATAAA	-18	NA	29766996	29730955	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_29731355_29738329_29738442_29740649_29740731_29742417_29742481_29748417_29748572_29766948
H1_mix_00059460	chr22	-	2971	22	NIC	ENSG00000100325.15	novel	2823	21	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	2	22	junction_18	106.716123738447	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATCTGTGTATGTCCATGA	-11	True	NA	-21	True	AATAAA	-19	NA	29838269	29788610	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_29789185_29790468_29790549_29792432_29792536_29793359_29793491_29793576_29793677_29800990_29801111_29801993_29802209_29804637_29804831_29806215_29806291_29806484_29806554_29806796_29806905_29808110_29808186_29813429_29813543_29814656_29814768_29816005_29816074_29822334_29822465_29825086_29825258_29825621_29825781_29827476_29827601_29832244_29832343_29834488_29834551_29838177
H1_mix_00059461	chr22	-	2793	20	FSM	ENSG00000100325.15	ENST00000307790.8	2790	20	0	-3	0	1	multi-exon	FALSE	canonical	3	152	junction_19	49.6908447845442	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTATGTCCATGACCC	-16	True	NA	-18	True	AATAAA	-22	NA	29838274	29788607	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_29789185_29790468_29790549_29792432_29792536_29793359_29793491_29793576_29793677_29800990_29801111_29801993_29802209_29804637_29804831_29806215_29806291_29806484_29806554_29806796_29806905_29808110_29808186_29813429_29813543_29814656_29814768_29816005_29816074_29822334_29822465_29825086_29825258_29825621_29825781_29832244_29832343_29838177
H1_mix_00059463	chr22	-	2823	21	FSM	ENSG00000100325.15	ENST00000397771.6	2823	21	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_19	66.6039788601252	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGCTAATAAAATTTTTG	-18	True	NA	-52	True	AAAAAG	-1	NA	29838276	29788641	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_29789185_29790468_29790549_29792432_29792536_29793359_29793491_29793576_29793677_29800990_29801111_29801993_29802209_29804637_29804831_29806215_29806291_29806484_29806554_29806796_29806905_29808110_29808186_29813429_29813543_29814656_29814768_29816005_29816074_29822334_29822465_29825086_29825258_29825621_29825781_29832244_29832343_29834488_29834551_29838177
H1_mix_00059469	chr22	-	28724	1	FSM	ENSG00000279159.1	ENST00000624945.1	49287	1	20577	-14	20577	14	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTCGAAATGAAAGAAACCC	NA	False	NA	NA	False	NA	NA	NA	30007659	29978935	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_29978900_30007700
H1_mix_00059470	chr22	-	902	5	FSM	ENSG00000227117.6	ENST00000429350.5	902	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1.08972473588517	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCGATCTCACTCTGGC	0	True	NA	NA	False	AATAAA	-27	NA	30080230	30008741	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_30009197_30018616_30018730_30040176_30040279_30050460_30050590_30080127
H1_mix_00059471	chr22	-	1501	9	FSM	ENSG00000239282.8	ENST00000407689.8	1501	9	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	11.4938842433705	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTGGGCTACGGTCCTT	-1	True	NA	-4	True	AATAAA	-16	NA	30289505	30285116	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_30285689_30285831_30285927_30286015_30286099_30286262_30286377_30286824_30286949_30287154_30287288_30287372_30287561_30288705_30288777_30289384
H1_mix_00059472	chr22	-	1517	9	NIC	ENSG00000239282.8	novel	1501	9	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_5	36.9687367920517	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTGGGCTACGGTCCTT	21	True	NA	-4	True	AATAAA	-16	NA	30289518	30285116	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_30285689_30285831_30285927_30286015_30286099_30286262_30286377_30286824_30286952_30287154_30287288_30287372_30287561_30288705_30288777_30289384
H1_mix_00059473	chr22	-	1460	8	FSM	ENSG00000239282.8	ENST00000404953.7	1460	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	41.5137056296115	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTGTTAATAAAGGACTT	19	False	NA	-33	True	NA	NA	NA	30289607	30285145	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_30285689_30285831_30285927_30286015_30286099_30286824_30286949_30287154_30287288_30287372_30287561_30288705_30288777_30289384
H1_mix_00059474	chr22	-	1974	9	FSM	ENSG00000099992.16	ENST00000215790.12	1972	9	0	-2	0	2	multi-exon	FALSE	canonical	3	56	junction_1	15.8740157175177	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTGTACAGCTAGGGGCTG	-6	True	NA	2	True	AATAAA	-19	NA	30326941	30291987	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_30292852_30293650_30293806_30293920_30294111_30294795_30294862_30294940_30295056_30295736_30295844_30299443_30299552_30304530_30304631_30326672
H1_mix_00059475	chr22	-	5090	16	FSM	ENSG00000099995.19	ENST00000215793.13	5090	16	0	0	0	0	multi-exon	FALSE	canonical	3	477	junction_4	114.969677161705	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTATGATCATTAACTCT	9	True	NA	-33	True	AATAAA	-21	NA	30356894	30331987	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_30334696_30335466_30335539_30335651_30335754_30337025_30337181_30337689_30337898_30338788_30339035_30339129_30339252_30340195_30340382_30340694_30340813_30341691_30341886_30342199_30342351_30342804_30342880_30344932_30345191_30346311_30346520_30352950_30353073_30356729
H1_mix_00059476	chr22	-	2008	9	FSM	ENSG00000099999.15	ENST00000382363.8	2011	9	3	0	3	0	multi-exon	FALSE	canonical	3	13	junction_8	5.47151715705982	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTAAAATGTGTATAGGT	-12	True	NA	-9	True	AATAAA	-22	NA	30387408	30378820	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_30379623_30379710_30379814_30380061_30380206_30380281_30380402_30384338_30384496_30385903_30385990_30386069_30386142_30386615_30386760_30387028
H1_mix_00059477	chr22	-	1651	8	FSM	ENSG00000099999.15	ENST00000215798.10	1651	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	5.82745087267747	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGGCTGCGGCTTTGTG	-6	True	NA	-80	True	NA	NA	NA	30387125	30378982	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_30379814_30380061_30380206_30380281_30380402_30384338_30384496_30385903_30385990_30386069_30386142_30386615_30386760_30387028
H1_mix_00059478	chr22	-	2269	16	NNC	ENSG00000100029.18	novel	2265	15	NA	NA	0	75870	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	176.158211717636	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTTCTCATATCCCATG	-1	True	NA	NA	False	ACTAAA	-27	NA	30591890	30500754	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_30500784_30576629_30577130_30578836_30578999_30579136_30579304_30579750_30579936_30580052_30580179_30580570_30580702_30581011_30581102_30581333_30581409_30581527_30581645_30584364_30584455_30584545_30584718_30587285_30587396_30588020_30588175_30589190_30589271_30591809
H1_mix_00059479	chr22	-	1720	3	FSM	ENSG00000128242.13	ENST00000402321.5	1908	3	188	0	-31	0	multi-exon	FALSE	canonical	3	13	junction_2	87.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCTCAGTGGTGGTGAC	9719	False	NA	-3	True	AGTAAA	-27	NA	30564945	30554634	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_30556094_30557261_30557402_30564824
H1_mix_00059480	chr22	-	1720	3	FSM	ENSG00000128242.13	ENST00000402369.5	1712	3	0	-8	0	8	multi-exon	FALSE	canonical	3	111	junction_2	38.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTGGTGACTTGGGGTG	3	True	NA	5	True	AGTAAA	-35	NA	30574578	30554626	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_30556094_30557261_30557402_30574465
H1_mix_00059481	chr22	-	1909	4	FSM	ENSG00000128242.13	ENST00000406361.6	1909	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	79.7551809532703	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCTCAGTGGTGGTGAC	-1	True	NA	-3	True	AGTAAA	-27	NA	30574665	30554634	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_30556094_30557261_30557402_30558278_30558389_30574465
H1_mix_00059483	chr22	-	2266	15	FSM	ENSG00000100029.18	ENST00000354694.12	2265	15	0	-1	0	1	multi-exon	FALSE	canonical	3	530	junction_9	71.804155413833	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTCCATGAGCCTTCC	-21	True	NA	0	True	ATTAAA	-27	NA	30591910	30576623	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_30577130_30578836_30578999_30579136_30579304_30579750_30579936_30580052_30580179_30580570_30580702_30581011_30581102_30581333_30581409_30581527_30581645_30584364_30584455_30584545_30584718_30587285_30587396_30588020_30588175_30589190_30589271_30591809
H1_mix_00059484	chr22	-	2144	15	FSM	ENSG00000100029.18	ENST00000402284.7	2144	15	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_9	179.202143299865	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTTGTTATTAAATGACT	9	True	NA	-41	True	NA	NA	NA	30591880	30576664	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_30577130_30578836_30578999_30579136_30579304_30579750_30579936_30580052_30580179_30580570_30580702_30581011_30581102_30581333_30581409_30581527_30581645_30584415_30584455_30584545_30584718_30587285_30587396_30588020_30588175_30589190_30589271_30591809
H1_mix_00059485	chr22	-	1988	15	FSM	ENSG00000100029.18	ENST00000335214.8	1988	15	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_6	165.101035856279	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTGTGCCCAGCCTGAT	-3	True	NA	NA	False	NA	NA	NA	30591858	30576834	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_30577130_30578836_30578999_30579136_30579304_30579750_30579936_30580052_30580179_30580570_30580687_30581011_30581102_30581333_30581409_30581527_30581645_30584364_30584455_30584545_30584718_30587285_30587396_30588020_30588175_30589190_30589271_30591809
H1_mix_00059488	chr22	-	625	3	FSM	ENSG00000100029.18	ENST00000492986.1	630	3	0	5	0	-5	multi-exon	FALSE	canonical	1	5	junction_1	2	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGGCATGAGAAGAATGAA	NA	False	NA	NA	False	AATAAA	-15	NA	30607058	30603784	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_30604103_30605460_30605518_30606808
H1_mix_00059489	chr22	-	4699	2	FSM	ENSG00000167065.14	ENST00000334679.4	3050	2	22	-1671	2	1671	multi-exon	FALSE	canonical	3	19	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTACATCTGCAGTCTCC	-10	True	NA	NA	False	AATAAA	-18	NA	30667853	30659773	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_30664081_30667461
H1_mix_00059490	chr22	-	5953	26	FSM	ENSG00000133422.14	ENST00000397641.8	5657	26	-296	0	-296	0	multi-exon	FALSE	canonical	3	301	junction_11	28.7506243410469	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTCTGTTTTCTTAGTA	-23	True	NA	0	True	TATAAA	-24	NA	30969070	30925129	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_30926872_30928018_30928208_30932358_30932453_30932544_30932770_30932888_30933031_30933465_30933521_30934059_30934192_30934780_30935162_30935247_30935323_30936510_30936644_30936931_30937038_30937582_30937712_30937814_30937970_30938064_30938206_30939620_30939707_30939958_30940042_30940757_30940838_30941432_30941559_30941890_30942003_30942111_30942272_30946340_30946450_30949751_30949843_30950376_30950446_30956762_30956798_30958640_30958695_30967821
H1_mix_00059491	chr22	-	4469	27	FSM	ENSG00000133422.14	ENST00000215862.8	4469	27	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_26	96.3254468765981	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTGTGCCTGTGAGACC	846	False	NA	-22	True	TATAAA	-20	NA	30968201	30926610	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_30926872_30928018_30928208_30932358_30932453_30932544_30932770_30932888_30933031_30933465_30933521_30934059_30934192_30934780_30935162_30935247_30935323_30936510_30936644_30936931_30937038_30937582_30937712_30937814_30937970_30938064_30938206_30939620_30939707_30939958_30940042_30940757_30940838_30941432_30941559_30941890_30942003_30942111_30942272_30946340_30946450_30949751_30949843_30950376_30950446_30956762_30956798_30958640_30958695_30963224_30963335_30967065
H1_mix_00059493	chr22	-	2610	8	NNC	ENSG00000100078.4	novel	2600	7	NA	NA	12	100006	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	27.6700678181537	18	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGGGTGCGGTGGCTCAC	7	True	NA	NA	False	AAAAAG	-43	NA	31140496	31034800	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_31034826_31134809_31135937_31136682_31136800_31136907_31137041_31137709_31137994_31138275_31138411_31138666_31138800_31139840
H1_mix_00059494	chr22	-	2835	1	FSM	ENSG00000273387.1	ENST00000609017.1	1410	1	-1427	2	-1427	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTCCTGTTGATTCATC	6815	False	NA	-4	True	NA	NA	NA	31084992	31082157	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_31082200_31085000
H1_mix_00059495	chr22	-	694	5	FSM	ENSG00000198832.11	ENST00000400299.6	694	5	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_4	12.9494208364699	1017	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGCTCGACTCCTTCGT	-17	True	NA	-5	True	ACTAAA	-17	NA	31107568	31104776	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_31105129_31105207_31105287_31105657_31105693_31105929_31105966_31107376
H1_mix_00059496	chr22	-	524	5	FSM	ENSG00000198832.11	ENST00000460642.5	500	5	0	-24	0	0	multi-exon	FALSE	canonical	2	3	junction_4	145.131621295981	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGAAACTTCGGACCACG	10	True	NA	NA	False	NA	NA	NA	31107541	31105000	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_31105129_31105207_31105287_31105657_31105693_31105929_31106047_31107376
H1_mix_00059498	chr22	-	2426	6	FSM	ENSG00000100100.13	ENST00000215912.10	2420	6	0	-6	0	0	multi-exon	FALSE	canonical	2	12	junction_3	1.89736659610103	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGCCAAGTTTTTGAGG	-19	True	NA	0	True	ATTAAA	-17	NA	31292488	31281593	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_31283289_31289314_31289394_31289498_31289700_31290964_31291085_31291179_31291297_31292274
H1_mix_00059499	chr22	-	4129	5	FSM	ENSG00000100105.18	ENST00000266269.10	3895	5	-241	7	-241	-2	multi-exon	FALSE	canonical	0	0	junction_1	157.718895507165	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTATCTGCTCCCTTGA	NA	False	NA	-15	True	ATTAAA	-14	NA	31346587	31325810	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_31327310_31328786_31328925_31335691_31335864_31342896_31342961_31344331
H1_mix_00059500	chr22	-	3638	4	FSM	ENSG00000100105.18	ENST00000351933.8	3638	4	0	0	0	0	multi-exon	TRUE	canonical	3	247	junction_1	51.6999892542435	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTATCTGCTCCCTTGAGT	341	False	NA	-13	True	ATTAAA	-16	NA	31346232	31325808	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_31327310_31335691_31335864_31342896_31342961_31344331
H1_mix_00059501	chr22	-	3711	5	FSM	ENSG00000100105.18	ENST00000405309.7	3711	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	153.18371323349	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTATCTGCTCCCTTGAGT	341	False	NA	-13	True	ATTAAA	-16	NA	31346232	31325808	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_31327310_31328786_31328860_31335691_31335864_31342896_31342961_31344331
H1_mix_00059502	chr22	-	1329	2	FSM	ENSG00000100105.18	ENST00000465287.1	1702	2	371	2	65	-2	multi-exon	FALSE	canonical	3	99	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGAGGCTTTGTGTGTT	3353	False	NA	-6	True	GATAAA	-15	NA	31343220	31340678	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_31341684_31342896
H1_mix_00059503	chr22	-	3327	3	FSM	ENSG00000100105.18	ENST00000215919.3	2516	3	-811	0	-241	0	multi-exon	FALSE	canonical	3	99	junction_1	132	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGGCTTTGTGTGTTTT	NA	False	NA	-4	True	GATAAA	-17	NA	31346587	31340676	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_31341684_31342896_31342961_31344331
H1_mix_00059504	chr22	-	3765	19	NIC	ENSG00000184708.18	novel	3647	19	NA	NA	-28	79	combination_of_known_junctions	FALSE	canonical	3	38	junction_6	36.636688081488	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTACAGTGGTGCAATCG	-54	True	NA	NA	False	NA	NA	NA	31489870	31439279	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_31440122_31440703_31440869_31441773_31442119_31442961_31443095_31444605_31444691_31447425_31447569_31448152_31448233_31449347_31449532_31450288_31450361_31454143_31454377_31455135_31455316_31455851_31455988_31458474_31458651_31462931_31463134_31463680_31463968_31468174_31468303_31471843_31471918_31488622_31488746_31489693
H1_mix_00059505	chr22	-	3668	19	FSM	ENSG00000184708.18	ENST00000330125.10	3647	19	0	-21	0	13	multi-exon	FALSE	canonical	3	109	junction_6	26.0813660363292	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCTCTCTGAAACCCTT	-26	True	NA	36	True	AATGAA	-22	NA	31489842	31439345	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_31440122_31440703_31440869_31441773_31442119_31442961_31443095_31444605_31444691_31447425_31447566_31448152_31448233_31449347_31449532_31450288_31450361_31454143_31454377_31455135_31455316_31455851_31455988_31458474_31458651_31462931_31463134_31463680_31463968_31468174_31468303_31471843_31471918_31488622_31488746_31489693
H1_mix_00059506	chr22	-	655	5	FSM	ENSG00000184708.18	ENST00000423097.5	688	5	33	0	33	0	multi-exon	FALSE	canonical	0	0	junction_4	79.9261377773254	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGACAAGCGTTTCAGGG	7198	False	NA	NA	False	NA	NA	NA	31489209	31463699	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_31463968_31468174_31468303_31471843_31471918_31488622_31488746_31489147
H1_mix_00059508	chr22	-	2658	8	FSM	ENSG00000241878.12	ENST00000382151.6	2669	8	11	0	11	0	multi-exon	FALSE	canonical	3	11	junction_7	179.590691090966	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTCTGTTCCTGGAGG	2665	False	NA	-1	True	AATAAA	-18	NA	31628210	31618490	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_31619837_31620552_31620714_31620995_31621143_31621333_31621473_31621648_31621886_31623683_31623850_31625762_31626017_31628002
H1_mix_00059510	chr22	-	2378	6	FSM	ENSG00000241878.12	ENST00000473770.5	2378	6	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_5	184.489999728983	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAGACTTCTGAACAGTAA	7695	False	NA	-69	True	NA	NA	NA	31630862	31618558	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_31619837_31620552_31620714_31620995_31621473_31621648_31621886_31623683_31623850_31630803
H1_mix_00059513	chr22	-	1779	8	FSM	ENSG00000241878.12	ENST00000439502.7	2358	8	-33	612	-27	-126	multi-exon	FALSE	canonical	3	357	junction_6	21.5804144008934	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACATTCACCTCATCCTG	189	False	NA	NA	False	NA	NA	NA	31662248	31619102	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_31619837_31620552_31620714_31620995_31621143_31621333_31621473_31621648_31621886_31648100_31648277_31650698_31650779_31662143
H1_mix_00059518	chr22	-	10836	9	FSM	ENSG00000183530.14	ENST00000327423.11	10827	9	0	-9	0	9	multi-exon	TRUE	canonical	3	52	junction_8	22.3295628036019	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCGTTACTTTGTTCTCG	5	True	NA	1	True	AATAAA	-31	NA	31750132	31681337	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_31685804_31688155_31688228_31701655_31701763_31703549_31703722_31704654_31704727_31712082_31717292_31725537_31725611_31738386_31738912_31749992
H1_mix_00059519	chr22	-	11365	9	NNC	ENSG00000183530.14	novel	10827	9	NA	NA	-12	0	intron_retention	FALSE	canonical	3	11	junction_8	34.1018694502222	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCTCAAGGCCGTTACT	-15	True	NA	-8	True	AATAAA	-22	NA	31750152	31681346	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_31685804_31688155_31688228_31701655_31701763_31703549_31703722_31704654_31704727_31712082_31717292_31725537_31725611_31738386_31738912_31749474
H1_mix_00059521	chr22	-	214	2	FSM	ENSG00000205856.4	ENST00000490640.1	608	2	146	248	146	-248	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGAGCACCTGTGAACAG	9523	False	NA	NA	False	NA	NA	NA	32149780	32149427	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_32149614_32149752
H1_mix_00059522	chr22	-	1148	5	FSM	ENSG00000205853.12	ENST00000400234.6	1315	5	147	20	70	0	multi-exon	FALSE	canonical	1	1	junction_4	1.4790199457749	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAGTGGTCAATATTAAA	105	False	NA	NA	False	AATAAA	-16	NA	32370929	32359905	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_32360840_32362971_32363059_32367689_32367715_32368496_32368568_32370898
H1_mix_00059524	chr22	-	2021	12	FSM	ENSG00000100220.12	ENST00000216038.6	2019	12	0	-2	0	2	multi-exon	FALSE	canonical	3	1334	junction_1	111.584012006816	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCGTCTGTTGCTTTGTC	-15	True	NA	-8	True	AAGAAA	-31	NA	32412247	32387579	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_32388100_32392239_32392360_32393891_32394003_32395025_32395215_32396073_32396250_32397940_32398101_32399602_32399760_32401746_32401904_32406661_32406762_32408174_32408243_32408754_32408834_32412063
H1_mix_00059525	chr22	-	332	3	FSM	ENSG00000100220.12	ENST00000463455.1	628	3	0	296	0	-296	multi-exon	FALSE	canonical	3	1603	junction_1	56	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTCAGAGTTCAGAACT	-16	True	NA	NA	False	NA	NA	NA	32412248	32408174	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_32408243_32408754_32408834_32412063
H1_mix_00059526	chr22	-	7867	14	FSM	ENSG00000185666.15	ENST00000358763.7	7867	14	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	19.1206075514377	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATATGGTTTTGTATGAAT	-3	True	NA	NA	False	AAGAAA	-33	NA	33058381	32507819	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_32513825_32518042_32518335_32527917_32528006_32528873_32529009_32533792_32533896_32538035_32538111_32541570_32541714_32596673_32596737_32864914_32865005_32868965_32869126_32931389_32931482_32980644_32980703_33006351_33006825_33058291
H1_mix_00059527	chr22	-	635	3	FSM	ENSG00000185666.15	ENST00000441821.5	855	3	220	0	220	0	multi-exon	FALSE	canonical	0	0	junction_2	35.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTGGGAGCTGTGTCTT	740	False	NA	NA	False	NA	NA	NA	33057638	32980644	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_32980703_33006351_33006825_33057534
H1_mix_00059529	chr22	-	4753	15	FSM	ENSG00000133424.22	ENST00000397394.8	4753	15	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_14	17.9171847733979	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACATGTCAAAGTCCAATT	2079	False	NA	NA	False	AATAAA	-41	NA	33920476	33272508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_33274625_33277059_33277256_33283201_33283349_33304228_33304508_33316084_33316249_33337645_33337802_33381918_33382045_33384191_33384305_33432160_33432266_33564847_33565020_33604434_33604559_33626243_33626327_33650366_33650669_33761370_33761559_33919994
H1_mix_00059530	chr22	-	3258	11	FSM	ENSG00000133424.22	ENST00000674708.1	3279	11	21	0	21	0	multi-exon	FALSE	canonical	3	151	junction_5	16.3245214324953	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCCCTCCCACTCTTGCA	NA	False	NA	-10	True	AATAAA	-26	NA	33604686	33273076	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_33274625_33277059_33277256_33283201_33283349_33304228_33304508_33316084_33316249_33337645_33337802_33381918_33382045_33384191_33384305_33432160_33432266_33564847_33565020_33604434
H1_mix_00059532	chr22	-	487	2	Antisense	novelGene_ENSG00000238584.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	261	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAGAGTACTCACTTAGT	NA	False	NA	-9	True	ATTAAA	-21	NA	35257449	35232641	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr22_-_35232892_35257212
H1_mix_00059533	chr22	-	7188	14	NIC	ENSG00000100320.23	novel	7224	14	NA	NA	21	0	combination_of_known_junctions	FALSE	canonical	3	260	junction_12	74.840896328903	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGGGCTGTGTGTATT	0	True	NA	-5	True	AATAAA	-15	NA	36028803	35738735	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_35744250_35745922_35745996_35746472_35746562_35756104_35756145_35759887_35760021_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781744_35809779_35810005_35938846_35938898_36028239
H1_mix_00059534	chr22	-	3204	13	NIC	ENSG00000100320.23	novel	1254	13	NA	NA	3828	1426	combination_of_known_junctions	FALSE	canonical	3	53	junction_12	112.969360398689	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGGGTCCCCCCACCCC	4204	False	NA	NA	False	NA	NA	NA	35836390	35742175	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_35744250_35745922_35745996_35746472_35746562_35756104_35756145_35759887_35760021_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781744_35809779_35810005_35836319
H1_mix_00059535	chr22	-	7191	14	NIC	ENSG00000100320.23	novel	7224	14	NA	NA	21	0	combination_of_known_junctions	FALSE	canonical	3	132	junction_11	96.7316791515545	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGGGCTGTGTGTATT	0	True	NA	-5	True	AATAAA	-15	NA	36028803	35738735	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_35744250_35745922_35745996_35746472_35746562_35756104_35756145_35759887_35760021_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781747_35809779_35810005_35938846_35938898_36028239
H1_mix_00059536	chr22	-	1875	12	NIC	ENSG00000100320.23	novel	1254	13	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	46	junction_3	132.581239713494	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTCCCTCCTGTCTTCT	12	True	NA	-8	True	ATTAAA	-16	NA	35840403	35743605	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_35744250_35745922_35745996_35746472_35746562_35759887_35760021_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781744_35809779_35810005_35840191
H1_mix_00059537	chr22	-	1354	12	FSM	ENSG00000100320.23	ENST00000397303.6	1354	12	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_11	93.6626617968763	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAACTGTGGTAAAAAAA	NA	False	NA	-5	True	NA	NA	NA	35810004	35743957	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_35744250_35745922_35745996_35746472_35746562_35756104_35756145_35759887_35760021_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781747_35809779
H1_mix_00059538	chr22	-	1596	13	NNC	ENSG00000100320.23	novel	1935	13	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	138.775898483851	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTGCATTTTTTTCTTT	14	True	NA	-30	True	TTTAAA	-29	NA	35840449	35743982	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_35744250_35745922_35745996_35746472_35746562_35756104_35756145_35759887_35760031_35761199_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781744_35809779_35810005_35840191
H1_mix_00059540	chr22	-	1479	13	FSM	ENSG00000100320.23	ENST00000416721.6	1254	13	-164	-61	-35	0	multi-exon	FALSE	canonical	3	140	junction_12	93.3464276528864	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACACAAAAAAAG	15	True	NA	-73	True	AAAACA	-12	NA	35840448	35744086	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_35744250_35745922_35745996_35746472_35746562_35756104_35756145_35759887_35760021_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781744_35809779_35810005_35840191
H1_mix_00059541	chr22	-	225	1	FSM	ENSG00000237406.1	ENST00000436210.1	1135	1	634	276	634	-276	mono-exon	FALSE	NA	NA	NA	NA	NA	453	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGGGTACTTCCTCCCGT	647	False	NA	NA	False	NA	NA	NA	35897770	35897545	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_35897500_35897800
H1_mix_00059542	chr22	-	2522	5	FSM	ENSG00000128335.14	ENST00000358502.10	2429	5	-119	26	27	-25	multi-exon	FALSE	canonical	3	36	junction_2	3.56195171219375	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCAATAAACTCACCTACT	16	True	NA	-31	True	NA	NA	NA	36239646	36226234	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_36228281_36231339_36231467_36233152_36233242_36233401_36233456_36239440
H1_mix_00059543	chr22	-	7451	41	FSM	ENSG00000100345.23	ENST00000216181.11	7451	41	0	0	0	0	multi-exon	FALSE	canonical	3	844	junction_34	166.361862742036	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCCGTGTCTGTAGCATT	-14	True	NA	-5	True	AATAAA	-16	NA	36387967	36281279	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_36282786_36284092_36284266_36284402_36284512_36285120_36285330_36285657_36285782_36285864_36285954_36286717_36286847_36288251_36288414_36288726_36288940_36289084_36289298_36291985_36292235_36293328_36293482_36293758_36293864_36294091_36294299_36294931_36295077_36295504_36295718_36296842_36297015_36298918_36299043_36300126_36300265_36300850_36301058_36301533_36301666_36302567_36302677_36303994_36304156_36305032_36305103_36305929_36306052_36306413_36306608_36309281_36309397_36312048_36312223_36314144_36314319_36316516_36316670_36318206_36318326_36319539_36319636_36320219_36320364_36320797_36320897_36321757_36321822_36322428_36322522_36326567_36326662_36327460_36327489_36341369_36341527_36348903_36349256_36387806
H1_mix_00059547	chr22	-	1290	4	FSM	ENSG00000100348.10	ENST00000416967.1	1280	4	0	-10	0	10	multi-exon	FALSE	canonical	3	39	junction_3	306.510467466719	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTGTGGGCTCAGAGC	-20	True	NA	-4	True	AATAAA	-29	NA	36481634	36467035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_36467918_36476732_36476857_36480574_36480788_36481563
H1_mix_00059548	chr22	-	1346	4	FSM	ENSG00000100348.10	ENST00000216185.7	1336	4	0	-10	0	10	multi-exon	FALSE	canonical	3	654	junction_3	21.6487105081727	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTGTGGGCTCAGAGC	17	False	36481657	-4	True	AATAAA	-29	NA	36481640	36467035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_36467918_36476732_36476857_36480574_36480838_36481563
H1_mix_00059551	chr22	-	3933	9	FSM	ENSG00000100350.16	ENST00000216187.10	3933	9	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_8	16.1123981765596	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAACAAAGTATGCT	46	False	NA	NA	False	AATAAA	-5	NA	36507022	36488241	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_36490268_36493632_36493804_36495966_36496209_36497990_36498157_36501240_36501408_36504097_36504368_36504514_36504767_36505895_36506424_36506911
H1_mix_00059552	chr22	-	5545	8	FSM	ENSG00000100350.16	ENST00000684868.1	5640	8	128	-33	-16	1	multi-exon	TRUE	canonical	3	28	junction_5	11.8769198233294	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTTGAGTGCTATTTC	NA	False	NA	-15	True	AGTAAA	-20	NA	36507093	36487188	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_36490268_36493632_36493804_36495966_36496209_36497990_36498157_36501240_36501408_36504097_36504368_36504514_36504767_36505895
H1_mix_00059553	chr22	-	1897	15	FSM	ENSG00000100353.18	ENST00000216190.13	1880	15	0	-17	0	17	multi-exon	TRUE	canonical	3	1215	junction_9	115.809220316018	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAACGATTTACAGTCGTT	-7	True	NA	-3	True	AATAAA	-40	NA	36529166	36510837	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_36511001_36511502_36511787_36512459_36512603_36516477_36516608_36516704_36516791_36517300_36517432_36518762_36518911_36519404_36519538_36520575_36520689_36523208_36523282_36523894_36523981_36524595_36524733_36525663_36525710_36525998_36526132_36529075
H1_mix_00059554	chr22	-	996	10	FSM	ENSG00000100353.18	ENST00000455547.5	996	10	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_9	616.459925304292	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTTGGGTCCAAACTCT	-7	True	NA	NA	False	NA	NA	NA	36529166	36518812	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_36518911_36519404_36519538_36520575_36520689_36523208_36523282_36523894_36523981_36524595_36524733_36525663_36525710_36525998_36526132_36526819_36526906_36529075
H1_mix_00059555	chr22	-	744	4	FSM	ENSG00000100360.15	ENST00000495555.6	744	4	0	0	0	0	multi-exon	FALSE	canonical	2	397	junction_3	74.4222189044822	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGCAGCTCCTTCCAC	9698	False	NA	-8	True	AATAAA	-17	NA	36766454	36758210	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_36758410_36762903_36763014_36763918_36764037_36766137
H1_mix_00059557	chr22	-	807	4	FSM	ENSG00000100362.13	ENST00000417718.7	550	4	-257	0	222	0	multi-exon	FALSE	canonical	3	33	junction_2	2.62466929133727	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCTGCTTGCTCAGGAAG	2206	False	NA	-17	True	AATAAA	-15	NA	36817292	36800702	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_36800919_36813645_36813756_36815102_36815236_36816944
H1_mix_00059558	chr22	-	470	4	FSM	ENSG00000100362.13	ENST00000443735.1	470	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	12.1928941054479	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTAGCCGTGACCTGGG	1	True	NA	NA	False	NA	NA	NA	36817514	36813645	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_36813756_36815102_36815236_36816944_36817013_36817355
H1_mix_00059559	chr22	-	1129	3	FSM	ENSG00000128311.14	ENST00000249042.8	1125	3	0	-4	0	-2	multi-exon	FALSE	canonical	3	31	junction_2	44.5	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTGCCTGCCTCTCTC	-3	True	NA	-17	True	AATAAA	-20	NA	37019447	37010860	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_37011326_37018137_37018754_37019399
H1_mix_00059560	chr22	-	2068	2	FSM	ENSG00000128311.14	ENST00000403892.7	1797	2	-273	2	-100	-2	multi-exon	FALSE	canonical	3	120	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTGCCTGCCTCTCTC	395	False	NA	-17	True	AATAAA	-20	NA	37019740	37010860	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_37011326_37018137
H1_mix_00059561	chr22	-	4043	10	FSM	ENSG00000100385.14	ENST00000216223.10	4034	10	-16	7	-16	-7	multi-exon	FALSE	canonical	2	2	junction_1	2	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGCAACAAAATAGTGTTG	8	True	NA	NA	False	AATAAA	-24	NA	37149932	37125849	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_37128849_37132383_37132469_37135327_37135443_37136227_37136394_37137586_37137736_37139116_37139223_37142433_37142513_37143520_37143636_37144084_37144206_37149824
H1_mix_00059562	chr22	-	3224	2	FSM	ENSG00000133466.14	ENST00000493023.1	3296	2	70	2	70	-2	multi-exon	FALSE	canonical	3	34	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGCGATTCAGACTGGT	9753	False	NA	-8	True	ATTAAA	-14	NA	37185878	37180172	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_37182736_37185217
H1_mix_00059563	chr22	-	2895	3	FSM	ENSG00000133466.14	ENST00000337843.7	2893	3	0	-2	0	2	multi-exon	FALSE	canonical	3	28	junction_2	3	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGACTGGTTCTTTCTGC	-4	True	NA	1	True	ATTAAA	-23	NA	37188247	37180163	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_37182736_37185217_37185456_37188162
H1_mix_00059564	chr22	-	479	5	FSM	ENSG00000133466.14	ENST00000467564.5	479	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	3.96074487943871	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCTTGTACCTTGTGTA	2241	False	NA	-3	True	AATAAA	-16	NA	37197748	37190552	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_37190678_37190864_37190929_37191671_37191738_37195380_37195459_37197602
H1_mix_00059565	chr22	-	1483	7	FSM	ENSG00000128340.15	ENST00000249071.11	1472	7	0	-11	0	11	multi-exon	TRUE	canonical	2	5	junction_2	3.43592135468138	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTGATTTCAGGTGCAGCT	-7	True	NA	-4	True	AATAAA	-25	NA	37244269	37225258	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_37226040_37226670_37226804_37231230_37231391_37231931_37231995_37232800_37232919_37241586_37241659_37244113
H1_mix_00059566	chr22	-	2071	8	FSM	ENSG00000100060.18	ENST00000356998.8	2073	8	0	2	0	-2	multi-exon	FALSE	canonical	3	12	junction_7	4.55801603815538	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGGTCCAGTTTTCTG	7	True	NA	-3	True	ATTAAA	-19	NA	37486384	37469064	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_37470030_37472442_37472529_37474511_37474678_37476895_37476982_37479344_37479499_37480196_37480300_37480720_37480770_37485922
H1_mix_00059567	chr22	-	4112	20	FSM	ENSG00000100065.15	ENST00000251973.10	4111	20	0	-1	0	1	multi-exon	FALSE	canonical	3	68	junction_11	14.1246920393953	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTGGCCTTCTGCTTGC	-27	True	NA	-4	True	ATTAAA	-17	NA	37519415	37490360	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_37491394_37491754_37491868_37492434_37492551_37492643_37492803_37494085_37494189_37495516_37495587_37495759_37496004_37496448_37496561_37497018_37497179_37502601_37502726_37503184_37503214_37504185_37504302_37504634_37504770_37506191_37506384_37507828_37507955_37508526_37508683_37510211_37510422_37515972_37516299_37517970_37518109_37518965
H1_mix_00059570	chr22	-	2391	5	FSM	ENSG00000100124.15	ENST00000498417.5	2403	5	12	0	12	0	multi-exon	FALSE	canonical	2	2	junction_4	34.7014048706965	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAAGTGTGTGGTAATTTA	9695	False	NA	-5	True	AATAAA	-19	NA	37834716	37830855	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_37832018_37832636_37832745_37832957_37833207_37833683_37833756_37833916
H1_mix_00059571	chr22	-	2087	8	FSM	ENSG00000100124.15	ENST00000215941.9	2087	8	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_7	16.8329123676062	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTGTGTGGTAATTTAT	-9	True	NA	-4	True	AATAAA	-20	NA	37844334	37830854	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_37832018_37832636_37832745_37832957_37833083_37833158_37833207_37833683_37833756_37838499_37838599_37840186_37840235_37843910
H1_mix_00059573	chr22	-	1140	1	FSM	ENSG00000100124.15	ENST00000609706.1	1140	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAGGCCTTAGTTTAGCC	4	True	NA	-4	True	AATAAA	-19	NA	37849318	37848178	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_37848200_37849300
H1_mix_00059574	chr22	-	2903	4	FSM	ENSG00000100146.19	ENST00000396884.8	2885	4	0	-18	0	6	multi-exon	FALSE	canonical	3	25	junction_3	2.94392028877595	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCCTGTCTCTTCATCT	-6	True	NA	-16	True	AATAAA	-36	NA	37984555	37972293	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_37974199_37977866_37978136_37983356_37983869_37984338
H1_mix_00059575	chr22	-	1576	9	NNC	ENSG00000128298.18	novel	1865	9	NA	NA	348	17	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_8	11.4646194877981	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGGTGTCTTATTTGGG	347	False	NA	0	True	AATAAA	-33	NA	38097434	38084882	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_38085376_38085685_38085733_38086241_38086450_38087123_38087265_38088747_38088965_38089095_38089232_38089521_38089675_38097031_38097179_38097400
H1_mix_00059576	chr22	-	1634	9	FSM	ENSG00000128298.18	ENST00000332536.10	1865	9	0	231	0	17	multi-exon	FALSE	canonical	3	16	junction_8	8.18439826743543	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGGTGTCTTATTTGGG	-1	True	NA	0	True	AATAAA	-33	NA	38097782	38084882	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38085376_38085685_38085733_38086241_38086450_38087123_38087265_38088747_38088965_38089095_38089232_38089521_38089675_38097031_38097179_38097690
H1_mix_00059577	chr22	-	3061	16	FSM	ENSG00000184381.20	ENST00000335539.7	3060	16	0	-1	0	0	multi-exon	FALSE	canonical	0	0	junction_15	13.3416640641263	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTGTGTGTGCAGTG	-13	True	NA	0	True	AATAAA	-20	NA	38181754	38111494	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38112306_38112503_38112578_38113486_38113655_38115526_38115682_38116074_38116212_38120758_38120910_38123094_38123259_38126370_38126450_38129453_38129563_38132830_38133014_38134987_38135085_38139981_38140170_38143104_38143289_38145437_38145654_38169217_38169472_38181663
H1_mix_00059578	chr22	-	3294	17	FSM	ENSG00000184381.20	ENST00000332509.8	3299	17	0	5	0	0	multi-exon	FALSE	canonical	0	0	junction_16	11.050311081594	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCACCTGTGTTGTGTGTG	-17	True	NA	-5	True	AATAAA	-15	NA	38181830	38111499	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38112306_38112503_38112578_38113486_38113655_38115526_38115682_38116074_38116212_38120758_38120910_38123094_38123259_38126370_38126450_38128268_38128431_38129453_38129563_38132830_38133014_38134987_38135085_38139981_38140170_38143104_38143289_38145437_38145654_38169217_38169472_38181663
H1_mix_00059579	chr22	-	2999	16	FSM	ENSG00000184381.20	ENST00000402064.5	3011	16	17	-5	2	0	multi-exon	FALSE	canonical	2	2	junction_8	10.4880884817015	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTGTGTGTGCAGTG	1	True	NA	0	True	AATAAA	-20	NA	38181812	38111494	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38112306_38112503_38112578_38113486_38113655_38115526_38115682_38116074_38116212_38120758_38120910_38123094_38123259_38126370_38126450_38129453_38129563_38132830_38133014_38134987_38135085_38139981_38140170_38143104_38143289_38145437_38145654_38169217_38169472_38181783
H1_mix_00059580	chr22	-	2870	16	FSM	ENSG00000184381.20	ENST00000655142.1	2870	16	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_12	12.2739109043894	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCCACCCCGAGAACCCT	-12	True	NA	-112	True	NA	NA	NA	38181825	38111606	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38112306_38112503_38112578_38113486_38113655_38115526_38115682_38116074_38116212_38120758_38120910_38123094_38123259_38126370_38126450_38128268_38128431_38129453_38129563_38132830_38133014_38134987_38135085_38143104_38143289_38145437_38145654_38169217_38169468_38181783
H1_mix_00059581	chr22	-	781	4	FSM	ENSG00000184381.20	ENST00000452794.5	781	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	12.2474487139159	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGGATTTCCAGACCTG	NA	False	NA	NA	False	NA	NA	NA	38132877	38126995	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38127459_38128268_38128431_38129453_38129563_38132830
H1_mix_00059582	chr22	-	4813	1	FSM	ENSG00000198792.13	ENST00000633056.1	4792	1	0	-21	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGGTGAGGTTTTT	7180	False	NA	-3	True	AATATA	-18	NA	38224103	38219290	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38219300_38224100
H1_mix_00059583	chr22	-	3587	9	FSM	ENSG00000198792.13	ENST00000361906.8	3587	9	0	0	0	0	multi-exon	TRUE	canonical	3	370	junction_2	30.7039797909001	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGGTGAGGTTTTT	-3	True	NA	-3	True	AATATA	-18	NA	38273010	38219290	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38221711_38224784_38224980_38225423_38225594_38226778_38226871_38230668_38230745_38231243_38231335_38245934_38246101_38247769_38248020_38272883
H1_mix_00059586	chr22	-	2825	11	FSM	ENSG00000213923.13	ENST00000396832.6	2817	11	0	-8	0	8	multi-exon	FALSE	canonical	3	586	junction_1	186.543319365771	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTTGTCCACCTCTGTG	-1	True	NA	-1	True	AATAAA	-27	NA	38317433	38290682	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38291939_38293254_38293320_38294108_38294249_38294341_38294535_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38317159
H1_mix_00059587	chr22	-	669	3	FSM	ENSG00000213923.13	ENST00000495232.5	669	3	0	0	0	0	multi-exon	FALSE	canonical	3	1041	junction_1	19.5	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCATTAGCCCTGTCTCAG	8546	False	NA	NA	False	NA	NA	NA	38294459	38292908	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38293320_38294108_38294249_38294341
H1_mix_00059588	chr22	-	1580	10	FSM	ENSG00000213923.13	ENST00000403904.5	1580	10	0	0	0	0	multi-exon	FALSE	canonical	3	867	junction_9	113.146032592213	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGACTGCTGCAGATGC	-7	True	NA	-7	True	NA	NA	NA	38317439	38293249	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38293320_38294108_38294249_38294341_38294535_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38317159
H1_mix_00059589	chr22	-	814	7	FSM	ENSG00000213923.13	ENST00000431611.5	814	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	510.83344208808	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGGTGAGTCCATGACTG	2242	False	NA	-17	True	NA	NA	NA	38300763	38293259	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38293320_38294108_38294249_38294341_38294535_38295386_38295448_38298785_38298935_38299894_38300066_38300723
H1_mix_00059590	chr22	-	1659	8	FSM	ENSG00000213923.13	ENST00000413574.6	1631	8	0	-28	0	28	multi-exon	FALSE	canonical	3	44	junction_1	395.477185285868	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGGGACCATGGAGAG	2633	False	NA	24	True	AATAAA	-44	NA	38317411	38296176	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38296687_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38317159
H1_mix_00059591	chr22	-	2127	8	FSM	ENSG00000213923.13	ENST00000405675.7	2127	8	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	394.474592441177	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTGTGTGTTTCTTGCG	-7	True	NA	-5	True	AATAAA	-15	NA	38317439	38296205	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38297156_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38317159
H1_mix_00059592	chr22	-	593	2	ISM	ENSG00000244627.5	ENST00000428294.5	700	8	62711	-464	8229	464	3prime_fragment	FALSE	canonical	3	5	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCGTTGTGGTGAGTCAT	NA	False	NA	-14	True	NA	NA	NA	38336205	38335297	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_-_38335810_38336124
H1_mix_00059593	chr22	-	1812	5	NNC	ENSG00000244627.5	novel	974	5	NA	NA	0	721	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	58.4182120575425	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCCAGGTGCAGTGGTTC	-2	True	NA	NA	False	AATAAA	-24	NA	38398920	38349655	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_38351057_38361398_38361561_38380369_38380424_38380936_38380991_38398779
H1_mix_00059594	chr22	-	705	5	NNC	ENSG00000244627.5	novel	679	4	NA	NA	0	-2404	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	56.7995378502325	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTGTTTGCTGAGTGTCC	58	False	NA	NA	False	AATAAA	-43	NA	38398860	38352780	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_38353135_38361398_38361561_38380369_38380424_38380936_38380991_38398779
H1_mix_00059595	chr22	-	4115	4	FSM	ENSG00000244627.5	ENST00000443658.5	679	4	0	-3436	0	2695	multi-exon	FALSE	canonical	3	99	junction_1	23.6690139681023	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCAGGCTGGAGTGTAAT	-11	True	NA	35	True	NA	NA	NA	38398929	38357703	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38361561_38380369_38380424_38380936_38380991_38398779
H1_mix_00059596	chr22	-	3466	5	NIC	ENSG00000244627.5	novel	938	6	NA	NA	0	2645	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	59.6363982815864	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTATCTTGAAGGTTTTT	58	False	NA	-15	True	ATTAAA	-20	NA	38398860	38357753	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_38360869_38361398_38361561_38380369_38380424_38380936_38380991_38398779
H1_mix_00059597	chr22	-	1173	4	NNC	ENSG00000244627.5	novel	468	3	NA	NA	0	2094	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	64.1681818002938	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGAAATGCAACCTGCCT	58	False	NA	NA	False	AATAAA	-23	NA	38398860	38366803	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_38367788_38380369_38380424_38380936_38380991_38398779
H1_mix_00059600	chr22	-	4793	13	FSM	ENSG00000100201.23	ENST00000396821.8	4791	13	0	-2	0	0	multi-exon	FALSE	canonical	3	45	junction_1	9.38490217790729	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGAGCTTTTATTGCTT	-6	True	NA	NA	False	AATAAA	-18	NA	38506337	38483437	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38486441_38487872_38488116_38492055_38492116_38493709_38493772_38494020_38494132_38494629_38494803_38494885_38495047_38495795_38495938_38498084_38498151_38498439_38498574_38499399_38499500_38501129_38501281_38505950
H1_mix_00059602	chr22	-	716	8	FSM	ENSG00000100206.11	ENST00000478820.1	1096	8	0	380	0	-380	multi-exon	FALSE	canonical	2	4	junction_1	10.6828109119085	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTACCACTGAAGAGTTTG	1	True	NA	NA	False	TTTAAA	-30	NA	38570184	38549877	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38549998_38552665_38552708_38555356_38555410_38562286_38562370_38566589_38566737_38567582_38567628_38568205_38568290_38570042
H1_mix_00059604	chr22	-	3648	4	FSM	ENSG00000100221.11	ENST00000216039.9	3648	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	4.64279609239471	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATTGCCAGCGTAAGTC	-1	True	NA	1	True	AATAAA	-28	NA	38700667	38685542	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38688002_38688934_38689130_38689295_38689425_38699802
H1_mix_00059605	chr22	-	592	1	FSM	ENSG00000229598.1	ENST00000418695.1	763	1	168	3	168	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGATCACCCATGTGTAT	NA	False	NA	NA	False	NA	NA	NA	38723337	38722745	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38722700_38723300
H1_mix_00059607	chr22	-	2398	18	FSM	ENSG00000100242.16	ENST00000689035.1	3960	18	-38	1600	-36	-381	multi-exon	FALSE	canonical	3	57	junction_17	7.27701980903158	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGGGGCCACCCCGAGT	-21	True	NA	NA	False	NA	NA	NA	38756036	38736333	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38736381_38738172_38738266_38738586_38738755_38738872_38738989_38739341_38739427_38739721_38739944_38740266_38740433_38741006_38741051_38741493_38741572_38742300_38742556_38745683_38745812_38748712_38748784_38749765_38749860_38750224_38750321_38750897_38751036_38751209_38751374_38752506_38752666_38755762
H1_mix_00059608	chr22	-	872	4	ISM	ENSG00000100242.16	ENST00000455125.2	2976	17	15274	430	-176	-430	3prime_fragment	FALSE	canonical	3	73	junction_3	6.94422221866655	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAATGCAGATTCCCAGT	6372	False	NA	NA	False	NA	NA	NA	38739423	38737759	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_-_38738266_38738586_38738755_38738872_38738989_38739341
H1_mix_00059609	chr22	-	1444	5	FSM	ENSG00000100242.16	ENST00000469086.5	1351	5	0	-93	0	93	multi-exon	FALSE	canonical	3	67	junction_4	7.79021822544144	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCTCAGGATCAGCAGAA	9337	False	NA	NA	False	NA	NA	NA	38742481	38739247	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38739427_38739721_38739944_38740266_38741051_38741493_38741572_38742300
H1_mix_00059610	chr22	-	1012	8	FSM	ENSG00000100242.16	ENST00000438058.5	1012	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	29.2204848470021	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGAGTCTCTGAGGGTG	15	True	NA	NA	False	NA	NA	NA	38756000	38745686	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38745812_38748712_38748784_38749765_38749860_38750224_38750321_38751209_38751374_38752506_38752666_38754641_38754707_38755762
H1_mix_00059615	chr22	-	6054	5	FSM	ENSG00000183741.12	ENST00000407418.8	6052	5	0	-2	0	2	multi-exon	FALSE	canonical	3	24	junction_1	3.69966214673719	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGACTGGCTTTTCAAAAG	9	True	NA	28	True	NA	NA	NA	38872216	38861419	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38867202_38871479_38871547_38871691_38871758_38871901_38871946_38872121
H1_mix_00059618	chr22	-	3976	6	FSM	ENSG00000100307.13	ENST00000216133.10	4111	6	140	-5	0	5	multi-exon	FALSE	canonical	3	23	junction_1	8.84081444212014	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCATTTGATTATTCCTTC	9	True	NA	NA	False	ATTAAA	-38	NA	39152540	39130766	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_39134049_39134400_39134753_39138635_39138703_39141370_39141437_39149788_39149833_39152375
H1_mix_00059621	chr22	-	3413	7	FSM	ENSG00000100311.17	ENST00000331163.11	3728	7	0	315	0	-315	multi-exon	FALSE	canonical	3	24	junction_6	4.13991411612474	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGTCTGTCTGTTGGCAT	-3	True	NA	-2	True	AATGAA	-7	NA	39244982	39223673	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_39225314_39225694_39225848_39230083_39230229_39231621_39231828_39233434_39233525_39235777_39235875_39243900
H1_mix_00059623	chr22	-	1401	3	FSM	ENSG00000100316.16	ENST00000467105.1	1396	3	0	-5	0	0	multi-exon	FALSE	canonical	3	26959	junction_1	4321.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCCTCTTTCTTCAGGA	4851	False	NA	-2	True	AATAAA	-19	NA	39314965	39312881	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_39312985_39313190_39314209_39314685
H1_mix_00059625	chr22	-	2105	10	FSM	ENSG00000100316.16	ENST00000465618.5	2108	10	0	3	0	0	multi-exon	FALSE	canonical	3	92	junction_7	14203.5775774979	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACATCTTGCCTCTTTCTT	NA	False	NA	-7	True	AATAAA	-14	NA	39320389	39312886	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_39312985_39313190_39313311_39313633_39313730_39314106_39314209_39314685_39314847_39315368_39315556_39316705_39317022_39317460_39317630_39318399_39318593_39319726
H1_mix_00059632	chr22	-	861	5	FSM	ENSG00000187051.9	ENST00000420879.5	861	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	365.437751197109	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGACAGCTCCAGGAGTAGG	-5	True	NA	-69	True	NA	NA	NA	39532761	39529155	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_39529624_39529819_39529918_39530463_39530555_39532394_39532524_39532686
H1_mix_00059633	chr22	-	852	3	FSM	ENSG00000187051.9	ENST00000459956.1	852	3	0	0	0	0	multi-exon	FALSE	canonical	3	855	junction_1	28.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTGGGGCCTCTGGGCTG	18	True	NA	-127	True	NA	NA	NA	39532738	39529213	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_39529624_39529819_39529918_39532394
H1_mix_00059634	chr22	-	4431	14	NIC	ENSG00000196588.21	novel	4343	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_13	21.0071838938	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTGTTAGTCCATCTTAT	4	True	NA	-8	True	AATAAA	-13	NA	40636691	40410289	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_40411908_40416985_40417047_40417340_40417494_40418373_40419385_40420404_40420577_40420846_40421101_40423535_40423686_40424205_40424382_40429605_40429768_40431404_40431481_40435498_40435555_40463220_40463287_40552105_40552368_40636477
H1_mix_00059635	chr22	-	4357	14	FSM	ENSG00000196588.21	ENST00000402042.7	4343	14	0	-14	0	5	multi-exon	FALSE	canonical	3	21	junction_6	31.6360591206678	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTATTCAGTCCATGGAAG	4	True	NA	6	True	AATAAA	-27	NA	40636691	40410275	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_40411908_40416985_40417047_40417340_40417494_40418373_40419385_40420404_40420577_40420846_40421101_40424205_40424382_40429605_40429768_40431404_40431481_40435498_40435555_40463220_40463287_40552105_40552368_40594673_40594736_40636477
H1_mix_00059638	chr22	-	462	1	FSM	ENSG00000230071.2	ENST00000438116.2	1304	1	1244	-402	1244	402	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTTTCTTTCCTTCTTT	8127	False	NA	25	True	AATACA	-44	NA	40586759	40586297	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_40586300_40586800
H1_mix_00059640	chr22	-	3554	12	FSM	ENSG00000100380.15	ENST00000216218.8	3212	12	-342	0	-342	0	multi-exon	FALSE	canonical	3	1875	junction_3	83.4618733166268	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTCTAAACCAGAAATGTT	5113	False	NA	-13	True	AATATA	-22	NA	40856981	40824534	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_40826667_40827095_40827230_40829625_40829675_40830839_40830957_40832568_40832672_40835559_40835671_40835802_40835888_40840625_40840693_40844838_40844910_40848293_40848370_40850822_40850881_40856430
H1_mix_00059641	chr22	-	4472	1	FSM	ENSG00000172404.5	ENST00000307221.5	2565	1	-932	-975	-932	975	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGCGACAAGAGCAAGACT	NA	False	NA	NA	False	NA	NA	NA	40863045	40858573	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_40858600_40863000
H1_mix_00059644	chr22	-	4226	15	FSM	ENSG00000100401.20	ENST00000455915.6	4222	15	0	-4	0	0	multi-exon	FALSE	canonical	3	815	junction_14	62.5195479634252	145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACTCAGAAACTCTCACT	3683	False	NA	-21	True	AATAAA	-18	NA	41282514	41245610	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_41246673_41249329_41249452_41249728_41249818_41251006_41251110_41252871_41252992_41254307_41254495_41256020_41256106_41256190_41256291_41256710_41256825_41257947_41258107_41261445_41261581_41264663_41264844_41268096_41268157_41274599_41274728_41280932
H1_mix_00059648	chr22	-	4337	2	FSM	ENSG00000183864.5	ENST00000327492.4	4337	2	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_1	0	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTCTGCCTGCTCCTGGC	3	True	NA	-7	True	ATTAAA	-17	NA	41446801	41433493	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_41437408_41446378
H1_mix_00059649	chr22	-	1071	4	FSM	ENSG00000100410.8	ENST00000216252.4	1053	4	0	-18	0	18	multi-exon	FALSE	canonical	3	637	junction_3	17.0163320241336	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAACTCTAGGAATTTAT	-11	True	NA	-4	True	AATAAA	-40	NA	41468692	41459698	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_41460488_41467447_41467615_41468123_41468148_41468601
H1_mix_00059650	chr22	-	504	4	FSM	ENSG00000100410.8	ENST00000459687.5	504	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	303.549007575383	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCACCAGGAGTGCCTGC	56	False	NA	NA	False	AAAACA	-39	NA	41468625	41460302	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_41460488_41467447_41467615_41468019_41468148_41468601
H1_mix_00059651	chr22	-	4468	6	FSM	ENSG00000100413.17	ENST00000355209.9	4468	6	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_3	38.7628688308799	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTGTTTTTGGTCGGTGC	-22	True	NA	2	True	AATAAA	-40	NA	41544470	41525798	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_41529337_41530686_41530889_41532093_41532158_41532658_41532746_41540698_41540796_41543990
H1_mix_00059652	chr22	-	4181	7	FSM	ENSG00000100413.17	ENST00000396504.6	4176	7	0	-5	0	0	multi-exon	FALSE	canonical	3	46	junction_6	97.8536321928488	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTGTTTTTGGTCGGTGC	-41	True	NA	2	True	AATAAA	-40	NA	41544489	41525798	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_41529337_41530686_41530889_41532093_41532158_41532658_41532746_41540698_41540796_41543990_41544122_41544427
H1_mix_00059654	chr22	-	1411	7	FSM	ENSG00000100417.12	ENST00000485648.5	1405	7	0	-6	0	0	multi-exon	FALSE	canonical	3	113	junction_6	10.2252411001186	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTCACAGTATTAAAGTT	3	True	NA	NA	False	NA	NA	NA	41589818	41576930	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_41577441_41577807_41577924_41578805_41578882_41583958_41584373_41584526_41584604_41586075_41586194_41589718
H1_mix_00059655	chr22	-	3780	6	FSM	ENSG00000100418.8	ENST00000263256.7	3780	6	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_5	10.0876161703348	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTGGTGCCTGAATCA	12	True	NA	0	True	AATAAA	-20	NA	41621043	41598027	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_41601191_41603258_41603382_41604043_41604154_41607261_41607332_41607839_41607862_41620751
H1_mix_00059658	chr22	-	1479	3	FSM	ENSG00000100138.15	ENST00000215956.10	877	3	171	-773	5	0	multi-exon	FALSE	canonical	3	804	junction_2	849.5	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGGCAGTGCCTGATTC	-17	True	NA	-8	True	AATAAA	-20	NA	41682451	41673933	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_41675196_41680243_41680365_41682355
H1_mix_00059659	chr22	-	1458	3	FSM	ENSG00000100138.15	ENST00000401959.6	1458	3	0	0	0	0	multi-exon	FALSE	canonical	3	1846	junction_2	328.5	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGCAGTGCCTGATTCT	13	True	NA	-7	True	AATAAA	-21	NA	41688867	41673932	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_41675196_41680243_41680365_41688793
H1_mix_00059660	chr22	-	1036	4	FSM	ENSG00000100138.15	ENST00000648674.1	1036	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	1033.91951115914	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGGTTCCAGCTTTCAG	-15	True	NA	-115	True	NA	NA	NA	41688895	41674614	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_41675196_41680243_41680365_41682355_41682588_41688793
H1_mix_00059662	chr22	-	2951	1	FSM	ENSG00000283829.1	ENST00000582688.1	76	1	-1682	-1193	-1682	1193	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCACCTGGGCATTTGGA	1825	False	NA	62	True	AATAAA	-20	NA	41924979	41922028	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_41922000_41925000
H1_mix_00059663	chr22	-	1189	5	FSM	ENSG00000100162.15	ENST00000402338.5	1002	5	-74	-113	-38	113	multi-exon	FALSE	canonical	3	418	junction_3	49.103844045044	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGCCGAGGTGGGTGGAT	378	False	NA	92	True	NA	NA	NA	41946767	41938623	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_41939197_41943609_41943702_41945224_41945305_41945912_41946006_41946416
H1_mix_00059664	chr22	-	905	4	FSM	ENSG00000100162.15	ENST00000404067.5	905	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	206.4175918429	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTCTCATTCACCACTTT	457	False	NA	-21	True	AAAAAG	-12	NA	41946688	41938736	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_41939197_41945224_41945305_41945912_41946006_41946416
H1_mix_00059665	chr22	-	846	5	FSM	ENSG00000100162.15	ENST00000407253.7	818	5	-28	0	-12	0	multi-exon	FALSE	canonical	3	47	junction_1	192.40500903043	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAAAAATCACTGGTCTC	-19	True	NA	-33	True	NA	NA	NA	41947164	41938748	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_41939197_41945224_41945305_41945912_41946006_41946416_41946497_41947019
H1_mix_00059666	chr22	-	938	6	FSM	ENSG00000100162.15	ENST00000215980.10	938	6	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_3	43.9909081515715	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTCTCATTCACCACTTT	-7	True	NA	-21	True	AAAAAG	-12	NA	41947152	41938736	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_41939197_41943609_41943702_41945224_41945305_41945912_41946006_41946416_41946497_41947019
H1_mix_00059669	chr22	-	1856	10	FSM	ENSG00000198951.12	ENST00000403363.5	1856	10	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_9	55.5477772332571	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGTCACCAATAAACCTG	-15	True	NA	-40	True	NA	NA	NA	42070830	42059795	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_42060414_42060923_42061068_42062826_42063025_42065737_42065900_42066709_42066805_42067112_42067291_42067764_42067937_42068438_42068575_42070281_42070367_42070762
H1_mix_00059670	chr22	-	1875	10	FSM	ENSG00000198951.12	ENST00000402937.1	1869	10	0	-6	0	0	multi-exon	FALSE	canonical	3	25	junction_9	53.7132303172236	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGTCACCAATAAACCTG	-27	True	NA	-40	True	NA	NA	NA	42070842	42059795	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_42060414_42060923_42061068_42062826_42063025_42065737_42065900_42066709_42066805_42067112_42067291_42067764_42067937_42068438_42068575_42070281_42070374_42070762
H1_mix_00059671	chr22	-	1585	3	FSM	ENSG00000184983.11	ENST00000498737.8	1072	3	0	-513	0	513	multi-exon	FALSE	canonical	3	4343	junction_1	404	261	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCAGCCATTGTGCATGG	-11	True	NA	NA	False	NA	NA	NA	42090772	42085012	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_42086315_42087059_42087176_42090605
H1_mix_00059673	chr22	-	1189	1	FSM	ENSG00000213790.2	ENST00000396387.2	1189	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTAGTTACTGCTCAGAT	21	False	NA	NA	False	AAGAAA	-4	NA	42108953	42107764	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_42107800_42109000
H1_mix_00059674	chr22	-	695	5	FSM	ENSG00000205702.12	ENST00000435101.1	692	5	0	-3	0	3	multi-exon	FALSE	canonical	3	4	junction_3	7.3143694191639	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTCCCCTGCTCACGCCCT	2627	False	NA	5	True	AATAAA	-22	NA	42141924	42140199	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_42140457_42140554_42140697_42141151_42141340_42141624_42141676_42141867
H1_mix_00059675	chr22	-	7517	6	NIC	ENSG00000100207.21	novel	7624	6	NA	NA	75	1	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	42.8607046139001	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCTTCTGTTTACTTTA	64	False	NA	-23	True	AATAAA	-18	NA	42270578	42160011	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_42161359_42168608_42168704_42169846_42169897_42179608_42179703_42209650_42215342_42270338
H1_mix_00059677	chr22	-	7504	5	NIC	ENSG00000100207.21	novel	7624	6	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_4	32.4220218370169	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTCTTCTGTTTACTTT	-19	True	NA	-24	True	AATAAA	-17	NA	42270661	42160012	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_42161359_42169846_42169897_42179608_42179703_42209650_42215342_42270338
H1_mix_00059679	chr22	-	927	2	FSM	ENSG00000229891.3	ENST00000432473.2	896	2	76	-107	0	94	multi-exon	FALSE	canonical	3	118	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTAGGCCAATAAAAT	9042	False	NA	92	True	NA	NA	NA	42369208	42364292	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_42364726_42368714
H1_mix_00059680	chr22	-	1335	2	FSM	ENSG00000229891.3	ENST00000669665.2	1290	2	10	-55	10	42	multi-exon	FALSE	canonical	3	18	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTAGGAATGGTTTATCTC	10	True	NA	40	True	AATAAA	-6	NA	42369249	42364344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_42365145_42368714
H1_mix_00059681	chr22	-	5417	7	FSM	ENSG00000189306.11	ENST00000323013.7	5419	7	2	0	0	0	multi-exon	FALSE	canonical	3	651	junction_4	149.846310153659	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATAGAACCTTTTTTTTT	1	True	NA	-7	True	AATAAA	-14	NA	42519794	42508343	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_42512996_42514105_42514305_42514681_42514780_42515150_42515269_42516010_42516137_42518004_42518148_42519713
H1_mix_00059684	chr22	-	1497	9	NNC	ENSG00000182841.13	novel	2387	8	NA	NA	-2	-3	intron_retention	FALSE	canonical	2	5	junction_1	169.657329269914	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTCTTCGGATCTCACTC	21	True	NA	NA	False	AATACA	-22	NA	42581999	42555339	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_42555803_42556524_42556675_42574679_42574819_42575930_42576127_42576511_42576610_42576980_42577099_42577843_42577963_42580216_42580360_42581928
H1_mix_00059685	chr22	-	2332	7	FSM	ENSG00000182841.13	ENST00000458605.6	2359	7	27	0	0	0	multi-exon	FALSE	canonical	3	129	junction_5	167.714042345893	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGACAGGAAGGCCTTGC	9	True	NA	NA	False	NA	NA	NA	42582011	42573243	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_42574819_42575930_42576127_42576511_42576610_42576980_42577099_42577843_42577963_42580216_42580360_42581928
H1_mix_00059686	chr22	-	3363	9	FSM	ENSG00000100227.19	ENST00000252115.10	3362	9	0	-1	0	1	multi-exon	FALSE	canonical	3	467	junction_6	69.2527075282981	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGAGTTATCTTTTTTTT	1	True	NA	-4	True	AATAAA	-17	NA	42614883	42583719	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_42585969_42587505_42587573_42591954_42592085_42595536_42595615_42596185_42596366_42599697_42599794_42601969_42602057_42602769_42603161_42614798
H1_mix_00059687	chr22	-	3324	8	FSM	ENSG00000100227.19	ENST00000348657.6	3323	8	0	-1	0	1	multi-exon	FALSE	canonical	3	171	junction_6	159.290262587209	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGAGTTATCTTTTTTTT	0	True	NA	-4	True	AATAAA	-17	NA	42614931	42583719	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_42585969_42587505_42587573_42591954_42592085_42595536_42595615_42596185_42596366_42599697_42599794_42602769_42603161_42614798
H1_mix_00059689	chr22	-	2963	9	FSM	ENSG00000100243.22	ENST00000352397.10	2916	9	0	-47	0	47	multi-exon	FALSE	canonical	3	1493	junction_8	98.6585019144321	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGAGGCGGGGCTAGGCTG	-22	True	NA	41	True	NA	NA	NA	42649392	42617792	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_42619946_42623788_42623889_42627303_42627390_42627604_42627689_42628151_42628282_42630881_42630989_42631377_42631451_42636714_42636847_42649294
H1_mix_00059690	chr22	-	3698	6	FSM	ENSG00000100243.22	ENST00000470741.1	3938	6	262	-22	262	-7	multi-exon	FALSE	canonical	3	1516	junction_1	83.3244261906435	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATGAGCAGAAAAAAAAAAAG	NA	False	NA	-51	True	NA	NA	NA	42633086	42618852	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_42619946_42623788_42623889_42627303_42627390_42627604_42627689_42628151_42628282_42630881
H1_mix_00059693	chr22	-	230	1	FSM	ENSG00000234009.1	ENST00000426545.1	891	1	603	58	603	-58	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGGTAGCTCAAAAGAAGG	NA	False	NA	NA	False	AAAAAG	-45	NA	42776693	42776463	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_42776500_42776700
H1_mix_00059695	chr22	-	3251	11	FSM	ENSG00000100266.19	ENST00000263246.8	3251	11	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_5	38.270615359568	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAAGTCCCTTCGCCAT	-20	True	NA	-18	True	AATAAA	-17	NA	43015149	42869772	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_42871470_42876136_42876334_42876887_42877011_42879047_42879170_42882183_42882305_42884385_42884562_42888642_42888799_42890946_42891183_42893456_42893614_42912020_42912158_43015020
H1_mix_00059697	chr22	-	1683	12	FSM	ENSG00000100271.17	ENST00000440761.1	1683	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	27.688049753884	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACGAAGGCACTTCTT	NA	False	NA	-30	True	NA	NA	NA	43089419	43039668	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_43039906_43046409_43046574_43051800_43051888_43059383_43059528_43063812_43063922_43064189_43064325_43068409_43068591_43069635_43069845_43070170_43070243_43075473_43075591_43079901_43079987_43089276
H1_mix_00059701	chr22	-	9795	22	FSM	ENSG00000159307.20	ENST00000360835.9	9795	22	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_14	5.43274693217206	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTCTTTTCTCTTATT	-16	True	NA	0	True	AATAAA	-18	NA	43343372	43197279	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_43204150_43207533_43207614_43208071_43208225_43210042_43210241_43210921_43211084_43212424_43212593_43214089_43214252_43218254_43218459_43220449_43220588_43221172_43221290_43222637_43222743_43223096_43223217_43227373_43227497_43229071_43229189_43231752_43231876_43238837_43238955_43258218_43258336_43262719_43262846_43291045_43291181_43319936_43320066_43339103_43339236_43343173
H1_mix_00059702	chr22	-	5399	6	NIC	ENSG00000130540.14	novel	2561	8	NA	NA	-21	-2	intron_retention	FALSE	canonical	3	50	junction_3	4.89897948556636	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGTTGCGTCGAGCGTTTC	10	True	NA	-7	True	AATAAA	-12	NA	43862491	43824511	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_43829199_43833639_43833735_43838866_43838994_43839944_43840026_43841801_43841933_43862213
H1_mix_00059703	chr22	-	2562	8	FSM	ENSG00000130540.14	ENST00000422525.1	2561	8	0	-1	0	0	multi-exon	FALSE	canonical	3	42	junction_1	6.77630927178938	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCGTCGAGCGTTTCTGC	1	True	NA	-4	True	AATAAA	-15	NA	43862470	43824508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_43826114_43827513_43827641_43829059_43829199_43833639_43833735_43838866_43838994_43839944_43840026_43841801_43841933_43862213
H1_mix_00059706	chr22	-	2812	5	ISM	ENSG00000100341.13	ENST00000216177.9	2540	9	4365	-1110	4347	1110	3prime_fragment	FALSE	canonical	3	10	junction_1	5.06828373317832	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGGTCTCTATTATTTG	4330	False	NA	0	True	NA	NA	NA	43887648	43878567	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_-_43880886_43881557_43881675_43884212_43884346_43886302_43886489_43887590
H1_mix_00059707	chr22	-	2693	5	NNC	ENSG00000138944.8	novel	6853	5	NA	NA	-19004	-4420	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	3.278719262151	49	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGTGGACCTGGGGTGG	30	False	NA	NA	False	NA	NA	NA	44331955	44248084	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_44249686_44285427_44285746_44296671_44296886_44300878_44300978_44331494
H1_mix_00059708	chr22	-	5419	2	FSM	ENSG00000188636.4	ENST00000341255.4	5419	2	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	0	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGCTACAGCTGTTTCT	-14	True	NA	-17	True	ATTAAA	-23	NA	44498233	44492582	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_44497812_44498043
H1_mix_00059711	chr22	-	3499	13	FSM	ENSG00000056487.16	ENST00000629843.2	3491	13	0	-8	0	5	multi-exon	FALSE	canonical	2	4	junction_5	25.2052684087188	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTTGGTGTCCTTGCG	332	False	NA	1	True	ATTAAA	-25	NA	45009649	44881156	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_44883305_44885425_44885530_44885862_44885939_44887962_44888122_44889759_44889783_44891305_44891361_44893456_44893534_44896031_44896084_44913821_44913963_44916279_44916631_44920397_44920491_45008544_45008611_45009495
H1_mix_00059715	chr22	-	2075	3	FSM	ENSG00000226328.7	ENST00000426282.6	2076	3	0	1	0	-1	multi-exon	FALSE	canonical	2	4	junction_2	18	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCCTTGTAGGCCACATT	16	True	NA	NA	False	AATAAA	-18	NA	45163781	45133020	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_45134798_45138823_45138917_45163576
H1_mix_00059719	chr22	-	6338	10	FSM	ENSG00000100364.19	ENST00000336156.10	6338	10	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_3	21.8276073916599	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCTCTAATCTTTTTCT	0	True	NA	-11	True	ATTAAA	-16	NA	45240894	45192243	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_45197217_45197789_45197949_45199872_45200036_45202989_45203185_45203844_45203986_45205216_45205319_45205629_45205708_45205792_45205913_45211955_45212108_45240639
H1_mix_00059721	chr22	-	1717	4	FSM	ENSG00000205643.11	ENST00000314567.8	1489	4	4	-232	0	230	multi-exon	FALSE	canonical	3	85	junction_3	19.4821855949366	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGCATCACTCAAAACTCA	-12	True	NA	NA	False	NA	NA	NA	46250289	46243780	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_46245239_46247109_46247222_46248171_46248285_46250255
H1_mix_00059722	chr22	-	1451	3	FSM	ENSG00000205643.11	ENST00000474256.1	498	3	18	-971	0	73	multi-exon	FALSE	canonical	3	35	junction_2	48	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGAGCCAGATTGTCCTTGA	-16	True	NA	63	True	TTTAAA	-44	NA	46250293	46243937	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_46245239_46247109_46247222_46250255
H1_mix_00059724	chr22	-	1862	5	FSM	ENSG00000205643.11	ENST00000381037.4	1600	5	-22	-240	0	230	multi-exon	FALSE	canonical	1	2	junction_2	43.4935340021939	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGCATCACTCAAAACTCA	NA	False	NA	NA	False	NA	NA	NA	46250311	46243780	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_46245239_46246672_46246796_46247109_46247222_46248171_46248285_46250255
H1_mix_00059725	chr22	-	1478	4	NIC	ENSG00000205643.11	novel	1489	4	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	34.2928563989645	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGGACTTTAAGATGCT	-1	True	NA	-12	True	AATAAA	-22	NA	46250278	46244012	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_46245239_46247105_46247222_46248171_46248285_46250255
H1_mix_00059728	chr22	-	11559	35	FSM	ENSG00000075275.18	ENST00000674500.2	11559	35	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_32	11.030352901023	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCGGTGCTGGTTTTT	-5	True	NA	-1	True	AATAAA	-21	NA	46537620	46361173	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_46363248_46363995_46364252_46364511_46364737_46365230_46365381_46365585_46365690_46366385_46366481_46366992_46367119_46367728_46367856_46369178_46369259_46369691_46369805_46372882_46373058_46377060_46377262_46378590_46378718_46380787_46380956_46381845_46382051_46384542_46384687_46386401_46386586_46389289_46389500_46390391_46390487_46391185_46391288_46391632_46391817_46394141_46394263_46396604_46396747_46397673_46397849_46398523_46398638_46399716_46399903_46408995_46409163_46409754_46409881_46410397_46410562_46411601_46411760_46433392_46433482_46436173_46436290_46439188_46439412_46463706_46464346_46533626
H1_mix_00059729	chr22	-	4442	13	FSM	ENSG00000100422.14	ENST00000216264.13	4442	13	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_12	25.3260680371475	300	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCTTGCTTTCTTTCCT	-3	True	NA	-14	True	AATAAA	-15	NA	46738252	46684409	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_46687207_46689991_46690201_46691571_46691778_46693426_46693504_46695209_46695316_46699312_46699466_46701635_46701711_46707842_46707989_46711085_46711150_46712167_46712294_46720085_46720209_46720901_46721016_46738006
H1_mix_00059730	chr22	-	657	1	FSM	ENSG00000260708.1	ENST00000564152.1	670	1	16	-3	16	3	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAAATTATTTTTACC	NA	False	NA	-21	True	AATAAA	-35	NA	46762547	46761890	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_46761900_46762500
H1_mix_00059733	chr22	-	4555	13	FSM	ENSG00000100425.19	ENST00000404760.6	4911	13	361	-5	361	5	multi-exon	FALSE	canonical	3	24	junction_6	42.2968182412499	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCATTTTATTCCTACAG	429	False	NA	-1	True	AATAAA	-19	NA	49827512	49773277	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_49774417_49775590_49775746_49776049_49776160_49777033_49777162_49777677_49777814_49787389_49787888_49794033_49794295_49797804_49798118_49798557_49798687_49798987_49799120_49804203_49804361_49822950_49824332_49827496
H1_mix_00059734	chr22	-	4591	13	NIC	ENSG00000100425.19	novel	4911	13	NA	NA	-68	5	combination_of_known_junctions	FALSE	canonical	3	114	junction_12	20.9038805541512	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCATTTTATTCCTACAG	0	True	NA	-1	True	AATAAA	-19	NA	49827941	49773277	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_49774417_49775590_49775746_49776049_49776160_49777033_49777162_49777677_49777814_49787389_49787495_49794033_49794295_49797804_49798118_49798557_49798687_49798987_49799120_49804203_49804361_49822950_49824332_49827496
H1_mix_00059735	chr22	-	5345	10	FSM	ENSG00000182858.14	ENST00000330817.11	5330	10	0	-15	0	15	multi-exon	FALSE	canonical	3	131	junction_3	13.3259238671688	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGGAGCATTCTTTGTAGG	0	True	NA	NA	False	GATAAA	-29	NA	49918438	49900213	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_49904067_49904178_49904255_49904336_49904507_49907720_49907945_49909243_49909348_49909893_49910089_49910433_49910608_49913384_49913518_49913603_49913844_49918262
H1_mix_00059737	chr22	-	1001	2	FSM	ENSG00000273253.2	ENST00000608025.2	1001	2	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATTTTAAGACATTAAAAAA	NA	False	NA	-33	True	ATTAAA	-16	NA	50200837	50199089	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50199329_50200075
H1_mix_00059738	chr22	-	4049	16	FSM	ENSG00000128159.12	ENST00000491449.5	4044	16	0	-5	0	0	multi-exon	FALSE	canonical	3	82	junction_12	61.5550340932585	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCAGCTCTCTCTCCTGG	807	False	NA	-2	True	AATAAA	-18	NA	50226189	50217688	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50217828_50217917_50218118_50218188_50218403_50218487_50218621_50218702_50218898_50219067_50219210_50219287_50219457_50219643_50219792_50219956_50221875_50222027_50222103_50222453_50222593_50224140_50224257_50224331_50224421_50224510_50224593_50225793_50225944_50226049
H1_mix_00059741	chr22	-	2439	20	NIC	ENSG00000100429.18	novel	2567	20	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	36	junction_19	19.2253007353761	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGCTCTGCCTCCTTTA	-24	True	NA	-5	True	AGTAAA	-17	NA	50251265	50245182	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_50245531_50245674_50245828_50245909_50246093_50246297_50246377_50246678_50246736_50246874_50246967_50247691_50247777_50247889_50248146_50248224_50248293_50248365_50248473_50248661_50248752_50248830_50248891_50249102_50249169_50249327_50249455_50249634_50249704_50249859_50249965_50250062_50250161_50250426_50250524_50250770_50250906_50251101
H1_mix_00059748	chr22	-	2038	11	FSM	ENSG00000188130.14	ENST00000467891.5	2019	11	0	-19	0	0	multi-exon	FALSE	canonical	3	37	junction_7	59.3039627680984	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGCTGTGCGTCCTCAT	8790	False	NA	-3	True	AATAGA	-19	NA	50261708	50252900	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50253481_50255196_50255371_50255452_50255532_50255614_50255695_50255809_50255882_50256084_50256200_50256598_50256647_50256787_50256965_50257081_50257194_50258242_50258302_50261166
H1_mix_00059749	chr22	-	2763	4	FSM	ENSG00000188130.14	ENST00000496942.5	2763	4	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_3	13.2748718344933	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGGGCCATAGGATCCT	4626	False	NA	-3	True	ATTAAA	-31	NA	50257107	50253780	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50255371_50255452_50255532_50255614_50256200_50256598
H1_mix_00059753	chr22	-	6591	37	NNC	ENSG00000196576.16	novel	6409	37	NA	NA	910	0	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_36	46.7438762741795	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGTTGGCTGAGTGTTCCT	7073	False	NA	-4	True	AATACA	-18	NA	50300552	50274978	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_50275809_50275888_50275964_50276628_50276705_50276841_50276907_50277590_50277739_50277852_50278014_50278116_50278272_50278434_50278520_50278595_50278697_50278854_50279012_50279629_50279777_50280004_50280072_50280488_50280671_50280743_50280974_50281088_50281190_50281359_50281500_50281565_50281743_50281853_50282082_50282183_50282314_50282710_50282882_50283049_50283187_50283336_50283446_50283601_50283751_50283832_50283991_50284131_50284214_50284572_50284666_50285799_50285902_50285989_50286099_50286172_50286288_50287110_50287265_50287666_50287794_50287936_50288038_50288742_50288872_50288959_50289143_50289516_50290598_50294718_50294779_50300276
H1_mix_00059754	chr22	-	6320	36	NIC	ENSG00000196576.16	novel	6383	37	NA	NA	3	-1	combination_of_known_splicesites	FALSE	canonical	3	36	junction_35	48.7824826371608	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGCGGGTTGGCTGAG	1	True	NA	-11	True	AATACA	-11	NA	50307624	50274985	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_50275809_50275888_50275964_50276628_50276705_50276841_50276907_50277590_50277739_50277852_50278014_50278116_50278272_50278434_50278520_50278595_50278697_50278854_50279012_50279629_50279777_50280004_50280072_50280488_50280671_50280743_50280974_50281088_50281190_50281359_50281500_50281565_50281743_50281853_50282082_50282183_50282314_50282710_50282882_50283049_50283187_50283336_50283446_50283601_50283751_50283832_50283991_50284131_50284214_50284572_50284666_50285799_50285902_50285989_50286099_50286172_50286288_50287110_50287265_50287666_50287794_50287936_50288038_50288742_50288872_50288959_50289143_50289516_50290598_50307552
H1_mix_00059758	chr22	-	6242	42	NNC	ENSG00000100241.22	novel	8019	41	NA	NA	0	30588	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	70.5591587534717	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACTTATTTAAACTGACAA	1	True	NA	NA	False	NA	NA	NA	50475035	50412630	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_50412660_50446805_50447241_50447321_50447454_50447521_50447610_50448232_50448445_50448542_50448651_50454511_50454743_50454813_50454945_50455015_50455143_50455223_50455410_50455480_50455583_50456215_50456396_50456491_50456674_50457033_50457112_50459254_50459393_50459469_50459667_50459951_50460160_50460271_50460409_50460533_50460713_50461158_50461287_50461522_50461719_50461795_50461870_50461946_50462120_50462204_50462474_50462558_50462718_50462869_50462939_50463282_50463433_50464328_50464442_50464533_50464739_50464818_50464918_50465000_50465130_50465214_50465329_50465762_50465841_50465960_50466075_50466149_50466259_50466349_50466483_50466604_50466711_50467337_50467449_50467531_50467691_50467785_50467924_50468375_50468462_50474785
H1_mix_00059759	chr22	-	8019	41	FSM	ENSG00000100241.22	ENST00000380817.8	8019	41	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_13	48.4166229202327	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTTCTGGACCCTTCTA	1	True	NA	NA	False	ATTAAA	-19	NA	50475035	50444999	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50447241_50447321_50447454_50447521_50447610_50448232_50448445_50448542_50448651_50454511_50454743_50454813_50454945_50455015_50455143_50455223_50455410_50455480_50455583_50456215_50456396_50456491_50456674_50457033_50457112_50459254_50459393_50459469_50459667_50459951_50460160_50460271_50460409_50460533_50460713_50461158_50461287_50461522_50461719_50461795_50461870_50461946_50462120_50462204_50462474_50462558_50462718_50462869_50462939_50463282_50463433_50464328_50464442_50464533_50464739_50464818_50464918_50465000_50465130_50465214_50465329_50465762_50465841_50465960_50466075_50466149_50466259_50466349_50466483_50466604_50466711_50467337_50467449_50467531_50467691_50467785_50467924_50468375_50468462_50474785
H1_mix_00059761	chr22	-	6045	40	FSM	ENSG00000100241.22	ENST00000689129.1	8669	40	129	2495	-9	0	multi-exon	FALSE	canonical	3	13	junction_12	81.8101424536348	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCCTGTGCCTGCCTTCC	9428	False	NA	-9	True	TATAAA	-17	NA	50474942	50446805	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50447241_50447321_50447454_50447521_50447610_50448232_50448445_50448542_50448651_50454511_50454743_50454813_50454945_50455015_50455143_50455223_50455410_50455480_50455583_50456215_50456396_50456491_50456674_50459254_50459393_50459469_50459667_50459951_50460160_50460271_50460409_50460533_50460713_50461158_50461287_50461522_50461719_50461795_50461870_50461946_50462120_50462204_50462474_50462558_50462718_50462869_50462939_50463282_50463433_50464328_50464442_50464533_50464739_50464818_50464918_50465000_50465130_50465214_50465329_50465762_50465841_50465960_50466075_50466149_50466259_50466349_50466483_50466604_50466711_50467337_50467449_50467531_50467694_50467785_50467924_50468375_50468462_50474785
H1_mix_00059763	chr22	-	2595	14	FSM	ENSG00000100258.18	ENST00000474879.7	2593	14	0	-2	0	2	multi-exon	FALSE	canonical	1	89	junction_12	63.929509997502	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCCTGGTGCTGCTTTCC	-4	True	NA	-21	True	AATAAA	-22	NA	50507702	50502946	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50503700_50503807_50503905_50504339_50504452_50504558_50504728_50504801_50504985_50505056_50505154_50505228_50505335_50505402_50505538_50505673_50505816_50506034_50506214_50506284_50506503_50506637_50506667_50506781_50507036_50507581
H1_mix_00059764	chr22	-	2564	13	NIC	ENSG00000100258.18	novel	2593	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	85.1118137119245	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCCTGGTGCTGCTTT	-4	True	NA	-23	True	AATAAA	-20	NA	50507702	50502948	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_50503700_50503807_50503905_50504339_50504452_50504558_50504728_50504801_50504985_50505056_50505154_50505228_50505335_50505402_50505538_50505673_50505816_50506034_50506214_50506284_50506503_50506781_50507036_50507581
H1_mix_00059765	chr22	-	1546	6	FSM	ENSG00000100258.18	ENST00000504717.1	1233	6	0	-313	0	1	multi-exon	FALSE	canonical	3	260	junction_3	29.3897941469484	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCCTGGTGCTGCTTTC	2441	False	NA	-22	True	AATAAA	-21	NA	50505257	50502947	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50503700_50503807_50503905_50504339_50504728_50504801_50504985_50505056_50505154_50505228
H1_mix_00059766	chr22	-	984	2	FSM	ENSG00000284194.3	ENST00000395693.8	984	2	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGTGTGATCT	-12	True	NA	-5	True	ATTAAA	-15	NA	50525598	50523567	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50524425_50525471
H1_mix_00059767	chr22	-	1073	2	FSM	ENSG00000284194.3	ENST00000543927.6	1068	2	0	-5	0	0	multi-exon	FALSE	canonical	3	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGTGTGATCT	-14	True	NA	-5	True	ATTAAA	-15	NA	50526461	50523567	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50524425_50526245
H1_mix_00059768	chr22	-	624	3	ISM	ENSG00000025708.14	ENST00000652401.1	866	6	1128	-102	-224	0	3prime_fragment	TRUE	canonical	3	24	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTCAGTGCTTGGGCGG	5952	False	NA	2	True	AATAAA	-18	NA	50526561	50525751	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_-_50525919_50526000_50526142_50526245
H1_mix_00059769	chr22	-	2072	2	FSM	ENSG00000025708.14	ENST00000487162.1	2049	2	0	-23	0	23	multi-exon	FALSE	canonical	3	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCTAAGTCATTTACCAT	0	True	NA	NA	False	NA	NA	NA	50530012	50527768	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50529732_50529903
H1_mix_00059772	chr22	-	4988	29	NIC	ENSG00000254413.8	novel	4906	27	NA	NA	145	8	intron_retention	FALSE	canonical	3	50	junction_10	110.933170726104	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTCCCTGGGGCCATTT	4	True	NA	-22	True	AATAAA	-21	NA	50582820	50568860	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_50569422_50569575_50569669_50570292_50570407_50570890_50571044_50571157_50571293_50571374_50571540_50572005_50572123_50572202_50572309_50572874_50573061_50573519_50573716_50573807_50573922_50574334_50574420_50574492_50574601_50576034_50576113_50576197_50576336_50576535_50576638_50576856_50577035_50577323_50577464_50577774_50577935_50578548_50579256_50579425_50579508_50579726_50579831_50579973_50580083_50580189_50580272_50580357_50580417_50580564_50580661_50581419_50581554_50581748_50581863_50582248
H1_mix_00059778	chr22	-	2121	8	FSM	ENSG00000100288.20	ENST00000479003.5	2114	8	0	-7	0	0	multi-exon	FALSE	canonical	3	264	junction_7	58.4605221757489	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGGCCCTGCTGAGCAG	4	True	NA	-8	True	AATAAA	-22	NA	50582820	50578958	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50579256_50579425_50579508_50579726_50579831_50579973_50580083_50580189_50580417_50580564_50580661_50581419_50581554_50581748
H1_mix_00059780	chr22	-	1478	11	FSM	ENSG00000100288.20	ENST00000406938.3	1474	11	0	-4	0	0	multi-exon	FALSE	canonical	3	163	junction_10	85.1920770964061	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGGCCCTGCTGAGCAG	-25	True	NA	-8	True	AATAAA	-22	NA	50582849	50578958	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50579256_50579425_50579508_50579726_50579831_50579973_50580083_50580189_50580272_50580357_50580417_50580564_50580661_50581419_50581554_50581748_50581863_50582248_50582358_50582557
H1_mix_00059781	chr22	-	2069	9	FSM	ENSG00000100288.20	ENST00000492582.5	2069	9	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_8	54.7298764387423	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGGCCCTGCTGAGCAG	-30	True	NA	-8	True	AATAAA	-22	NA	50582854	50578958	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50579256_50579425_50579508_50579726_50579831_50579973_50580083_50580189_50580272_50580357_50580417_50580564_50580661_50581419_50581554_50581748
H1_mix_00059784	chr22	-	4294	8	FSM	ENSG00000100299.18	ENST00000216124.10	4294	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	14.5377762665241	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTAGTGAGGGTTCTGTT	-17	True	NA	-1	True	AATAAA	-19	NA	50628152	50622753	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50625465_50625578_50625682_50625935_50626064_50626153_50626279_50626590_50626761_50626833_50627053_50627165_50627407_50627555
H1_mix_00059785	chr22	-	760	1	FSM	ENSG00000213683.4	ENST00000395613.2	760	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTGAGCAGTGAGGCAGA	NA	False	NA	NA	False	NA	NA	NA	50755434	50754674	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50754700_50755400
H1_mix_00059786	chr22	-	2153	9	FSM	ENSG00000079974.19	ENST00000354869.8	2153	9	15	-15	9	10	multi-exon	FALSE	canonical	3	55	junction_8	51.8325127212641	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTTGTGGCTCTGAAG	6	True	NA	-17	True	AGTAAA	-32	NA	50783621	50767490	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50768875_50769040_50769125_50769454_50769553_50769904_50770017_50775771_50775852_50776669_50776750_50777951_50777982_50782187_50782352_50783500
H1_mix_00059788	chr22	-	2184	9	FSM	ENSG00000079974.19	ENST00000395598.7	2169	9	0	-15	0	10	multi-exon	FALSE	canonical	3	35	junction_3	58.4335894413479	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTTGTGGCTCTGAAG	-6	True	NA	-17	True	AGTAAA	-32	NA	50783659	50767490	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50768875_50769040_50769125_50769454_50769550_50769904_50770017_50775771_50775852_50776669_50776750_50777951_50777982_50782187_50782348_50783500
H1_mix_00059793	chr22	+	760	1	Intergenic	novelGene_840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTCTACTAAAAATACAATAA	NA	False	NA	NA	False	NA	NA	NA	17532700	17533460	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_+_17532700_17533500
H1_mix_00059794	chr22	+	2281	1	Intergenic	novelGene_841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGCCACTGAGTCCT	1082	False	NA	NA	False	NA	NA	NA	17972465	17974746	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_+_17972500_17974700
H1_mix_00059795	chr22	+	2222	1	Intergenic	novelGene_843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACTGCTTTCACCCTGT	NA	False	NA	NA	False	CATAAA	-1	NA	21288228	21290450	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_+_21288200_21290400
H1_mix_00059796	chr22	+	359	1	Intergenic	novelGene_845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GCCATTAAAAAAAAAAAAGA	7384	False	NA	NA	False	AATAAA	-3	NA	22587183	22587542	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_+_22587200_22587500
H1_mix_00059797	chr22	+	2151	1	Intergenic	novelGene_846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACTTGCGTGCATGTTGAC	NA	False	NA	NA	False	ATTAAA	-14	NA	22636527	22638678	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_+_22636500_22638700
H1_mix_00059798	chr22	+	1742	1	Intergenic	novelGene_848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGATCTCATTGAGCTTCT	7729	False	NA	17	True	ATTAAA	-19	NA	24575179	24576921	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_+_24575200_24576900
H1_mix_00059799	chr22	+	825	1	Intergenic	novelGene_850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCAAAACCCGAACGTG	NA	False	NA	NA	False	NA	NA	NA	25178427	25179252	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_+_25178400_25179300
H1_mix_00059800	chr22	+	346	1	Intergenic	novelGene_853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2280	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTCGTAAAATAGGCAAAC	807	False	NA	NA	False	NA	NA	NA	27743110	27743456	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_+_27743100_27743500
H1_mix_00059801	chr22	+	2045	1	Intergenic	novelGene_857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGTCTCAAAAAAAAAAAAAA	8411	False	NA	NA	False	NA	NA	NA	29498929	29500974	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_+_29498900_29501000
H1_mix_00059802	chr22	+	221	1	Intergenic	novelGene_859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	415	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTCTTTATGAATGGCA	NA	False	NA	NA	False	NA	NA	NA	29600066	29600287	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_+_29600100_29600300
H1_mix_00059804	chr22	+	911	1	Intergenic	novelGene_860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGACTGAAAGATGAGGT	NA	False	NA	NA	False	AATAAA	-41	NA	43644964	43645875	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_+_43645000_43645900
H1_mix_00059805	chr22	+	815	1	Intergenic	novelGene_861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTTTCATCACCAGCC	NA	False	NA	NA	False	NA	NA	NA	43942686	43943501	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_+_43942700_43943500
H1_mix_00059806	chr22	+	5244	1	Intergenic	novelGene_863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGGAGCTGGGGAGAGG	NA	False	NA	NA	False	NA	NA	NA	44981526	44986770	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_+_44981500_44986800
H1_mix_00059808	chr22	+	1500	6	ISM	ENSG00000177663.14	ENST00000319363.11	8566	13	5	12835	5	2389	intron_retention	FALSE	canonical	3	54	junction_2	5.27636238330917	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCAGGCACAGTGGTTCA	26	True	NA	NA	False	AATAAA	-39	NA	17085004	17102858	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_+_17085230_17097061_17097087_17097796_17097944_17098774_17098888_17100354_17100482_17101995
H1_mix_00059809	chr22	+	2041	11	FSM	ENSG00000182902.14	ENST00000327451.11	2186	11	35	110	35	4	multi-exon	FALSE	canonical	2	6	junction_3	15.3088209866077	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATCTGTTCATCAGTGG	38	False	NA	7	True	AATAAA	-16	NA	17563532	17590885	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_17563714_17569923_17569987_17579744_17579965_17581036_17581160_17581357_17581414_17582562_17582654_17583415_17583535_17587135_17587302_17587924_17588080_17589589_17589666_17590094
H1_mix_00059810	chr22	+	4458	5	FSM	ENSG00000099968.18	ENST00000355028.4	4458	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	107.368524251756	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCCTTTCTCTTAATTT	3	True	NA	7	True	AATAAA	-19	NA	17638810	17730622	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_17638887_17655661_17655833_17683213_17683322_17688985_17689143_17726676
H1_mix_00059811	chr22	+	1971	1	FSM	ENSG00000269220.1	ENST00000600723.1	2160	1	98	91	98	-91	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTGTGATCGTGTCAGT	83	False	NA	NA	False	NA	NA	NA	17777419	17779390	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_17777400_17779400
H1_mix_00059812	chr22	+	1427	5	FSM	ENSG00000183785.16	ENST00000330423.8	2003	5	0	576	0	2	multi-exon	FALSE	canonical	1	3	junction_1	1.5	264	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTCTTTATTTATGCT	-2	True	NA	17	True	AATATA	-16	NA	18110808	18131156	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_18110869_18121478_18121702_18124155_18124305_18126353_18127035_18130842
H1_mix_00059813	chr22	+	1858	11	FSM	ENSG00000184979.10	ENST00000215794.8	1858	11	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	4.60434577328853	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTTGCAGTTTTAACGG	-1	True	NA	NA	False	AATAAA	-17	NA	18150169	18177397	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_18150223_18157557_18157821_18160171_18160269_18161789_18161936_18167254_18167335_18167889_18168037_18169843_18169940_18170752_18170921_18173149_18173282_18173792_18173843_18176771
H1_mix_00059814	chr22	+	1309	3	NNC	ENSG00000284294.1	novel	1382	4	NA	NA	62	18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	19.5	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCTCTGTGTCTTTTT	2099	False	NA	24	True	NA	NA	NA	18939507	18947759	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_18939750_18945071_18945170_18946790
H1_mix_00059815	chr22	+	1719	1	FSM	ENSG00000286025.1	ENST00000652053.1	1719	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGACTGCTAGATGTTC	NA	False	NA	NA	False	AATAAA	-29	NA	19029523	19031242	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_19029500_19031200
H1_mix_00059816	chr22	+	967	2	Genic_Genomic	ENSG00000260924.2	novel	1445	1	NA	NA	317	12	multi-exon	FALSE	canonical	2	5	junction_1	0	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGTGTTTGTTGTGAGTG	8	True	NA	35	True	AATAAA	-37	NA	19171711	19172851	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr22_+_19171852_19172024
H1_mix_00059817	chr22	+	352	1	FSM	ENSG00000273212.1	ENST00000608816.1	460	1	95	13	95	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACATGACCACCCTTGG	9150	False	NA	NA	False	AGTAAA	-5	NA	19456597	19456949	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_19456600_19456900
H1_mix_00059819	chr22	+	2015	20	FSM	ENSG00000093009.11	ENST00000437685.6	2072	20	57	0	-18	0	multi-exon	FALSE	canonical	2	2	junction_6	62.8666530561473	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGGCTCTGGTCTCGAG	414	False	NA	25	True	AATAAA	-25	NA	19479882	19520611	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_19480020_19480157_19480218_19480952_19481046_19482689_19482828_19483861_19484006_19494326_19494383_19494506_19494603_19495980_19496030_19497385_19497448_19499100_19499152_19505361_19505482_19507385_19507518_19507765_19507865_19508529_19508692_19514748_19514888_19514964_19515049_19516526_19516646_19516816_19516894_19518843_19518910_19520480
H1_mix_00059823	chr22	+	1257	6	FSM	ENSG00000093010.15	ENST00000676678.1	1405	6	148	0	148	0	multi-exon	FALSE	canonical	1	2	junction_1	71.370582175011	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGACTTAGTACATCCTTC	7858	False	NA	40	True	TATAAA	-34	NA	19941518	19969029	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_19941576_19961198_19961290_19962526_19962816_19963565_19963760_19964167_19964300_19968535
H1_mix_00059824	chr22	+	869	5	FSM	ENSG00000093010.15	ENST00000403184.5	2217	5	2	1346	2	-1	multi-exon	FALSE	canonical	3	41	junction_1	61.393708961098	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCCCCAACCAGGATGG	8074	False	NA	NA	False	NA	NA	NA	19941734	19964299	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_19941898_19961198_19961290_19962526_19962816_19963565_19963760_19964167
H1_mix_00059827	chr22	+	2064	8	FSM	ENSG00000183597.16	ENST00000432883.5	2084	8	20	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	24.2015347801392	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCGAGGCCTTTCCCTTG	4062	False	NA	26	True	AATAAA	-23	NA	20021088	20065925	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20021135_20036759_20036855_20043354_20043444_20052464_20052585_20055942_20056014_20061529_20061684_20063337_20063443_20064541
H1_mix_00059829	chr22	+	3661	11	FSM	ENSG00000128191.16	ENST00000498171.5	3661	11	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	7.7517739905134	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGATGTCTTTATTCTG	5356	False	NA	19	True	CATAAA	-21	NA	20087035	20111877	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20087322_20089668_20090259_20091434_20091633_20091868_20091971_20092808_20092908_20094712_20094796_20106176_20106278_20106591_20106699_20107270_20107399_20108889_20109004_20110024
H1_mix_00059830	chr22	+	508	3	FSM	ENSG00000128191.16	ENST00000495351.1	508	3	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	0.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATCCCAGCCTGCTGGGC	5374	False	NA	NA	False	NA	NA	NA	20106181	20107575	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20106278_20106591_20106699_20107270
H1_mix_00059832	chr22	+	688	4	FSM	ENSG00000099901.17	ENST00000448394.2	688	4	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_1	2551.99560257371	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGATGGCAGGACTGTG	4506	False	NA	17	True	AATAAA	-19	NA	20122606	20127353	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20122698_20125307_20125437_20126302_20126369_20126951
H1_mix_00059833	chr22	+	2177	2	FSM	ENSG00000099901.17	ENST00000486575.1	2177	2	0	0	0	0	multi-exon	FALSE	canonical	3	6460	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCAGGTTGTTTTTTT	6038	False	NA	21	True	TATAAA	-12	NA	20124138	20127181	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20125437_20126302
H1_mix_00059838	chr22	+	3218	17	FSM	ENSG00000099917.17	ENST00000406969.5	3210	17	-8	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	73.280710285859	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCAGTTGTTCATCACT	10	True	NA	25	True	AATAAA	-16	NA	20507609	20587617	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20507736_20537116_20537205_20551435_20551488_20553144_20553175_20554935_20555149_20564449_20564689_20566466_20566818_20568520_20568632_20582610_20582748_20582839_20582968_20583112_20583248_20583329_20583394_20584358_20584426_20584854_20585016_20585100_20585268_20585727_20585827_20586567
H1_mix_00059839	chr22	+	1050	8	FSM	ENSG00000226287.9	ENST00000450925.6	1961	8	911	0	18	0	multi-exon	TRUE	canonical	0	0	junction_1	28.2763332207018	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCGTGGGTTCGTCGTCTG	NA	False	NA	17	True	AATAAA	-17	NA	20702024	20704606	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20702307_20702585_20702710_20703005_20703123_20703467_20703525_20703632_20703693_20703967_20704041_20704187_20704229_20704310
H1_mix_00059841	chr22	+	972	2	FSM	ENSG00000099940.12	ENST00000490458.1	972	2	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATGAGGCCTGGAGATC	-1	True	NA	NA	False	NA	NA	NA	20859080	20871041	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20859348_20870336
H1_mix_00059842	chr22	+	655	5	ISM	ENSG00000183773.16	ENST00000483107.5	1325	11	2279	25	1098	12	3prime_fragment	FALSE	canonical	2	2	junction_1	5.21416340365355	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATTAAAACGCACAAAT	NA	False	NA	-23	True	NA	NA	NA	20977970	20981331	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_+_20978006_20979270_20979370_20979626_20979703_20980019_20980125_20980991
H1_mix_00059844	chr22	+	505	4	FSM	ENSG00000206140.12	ENST00000446867.5	496	4	-9	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	18.5472369909914	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCGTGGCTCTGGAGCCTC	478	False	NA	NA	False	GGGGCT	-42	NA	21468746	21469717	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_21468836_21468943_21469063_21469273_21469347_21469493
H1_mix_00059845	chr22	+	1624	14	FSM	ENSG00000100023.20	ENST00000680426.1	3138	14	-2	1516	0	-578	multi-exon	FALSE	canonical	3	167	junction_10	20.3108971830074	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTCAGCTGGGCTTGCT	-25	True	NA	NA	False	NA	NA	NA	21665999	21688849	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_21666132_21669912_21669963_21670565_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688107_21688731
H1_mix_00059847	chr22	+	4236	22	FSM	ENSG00000100023.20	ENST00000417788.5	4213	22	-23	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	78.1243848048341	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCAATTCTAATATCTG	-25	True	NA	28	True	ATTAAA	-20	NA	21665999	21697912	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_21666132_21669912_21669963_21670298_21670361_21670565_21670612_21670996_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21685637_21685727_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688107_21688731_21688850_21693815_21693873_21694592_21694666_21694754_21694818_21694936_21695071_21695393
H1_mix_00059852	chr22	+	3890	21	FSM	ENSG00000100023.20	ENST00000406385.1	3875	21	-15	0	0	0	multi-exon	FALSE	canonical	3	9	junction_20	47.9784066013035	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAAAGTCATAAGACTAC	0	True	NA	NA	False	TATAAA	-20	NA	21666024	21698276	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_21666132_21669912_21669963_21670565_21670612_21670996_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688107_21688731_21688850_21693815_21693873_21694592_21694666_21694754_21694818_21694936_21695071_21695393_21695497_21696030
H1_mix_00059857	chr22	+	3437	2	FSM	ENSG00000100023.20	ENST00000681027.1	3437	2	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGTTGTTGGTATAAA	NA	False	NA	NA	False	AAAAAG	-5	NA	21694681	21698237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_21694818_21694936
H1_mix_00059858	chr22	+	3104	5	ISM	ENSG00000286129.1	ENST00000652112.1	2895	14	-3	19439	-3	-19439	intron_retention	FALSE	canonical	3	232	junction_3	127.295915095497	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATATGATTTTGTGTGT	NA	False	NA	NA	False	AGTAAA	-6	NA	22298120	22309683	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_+_22298212_22303223_22303298_22303942_22304115_22306832_22307022_22307105
H1_mix_00059859	chr22	+	3184	9	Fusion	ENSG00000211643.2_ENSG00000272779.1	novel	1121	8	NA	NA	-5103	579	intron_retention	FALSE	canonical	3	67	junction_5	205.66777670554	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTTGTTGCCCAGGCTGG	NA	False	NA	NA	False	NA	NA	NA	22298120	22319805	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr22_+_22298212_22303223_22303298_22303942_22304115_22306832_22307022_22307105_22307246_22307532_22308820_22309735_22309884_22310225_22310402_22318898
H1_mix_00059860	chr22	+	3133	5	NNC	ENSG00000272779.1	novel	1121	8	NA	NA	-5089	-718	intron_retention	FALSE	canonical	3	318	junction_3	92.1764612034981	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATATGATTTTGTGTGT	-13	True	NA	NA	False	AGTAAA	-6	NA	22298134	22309683	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_22298212_22303223_22303298_22303942_22304115_22306789_22307022_22307105
H1_mix_00059861	chr22	+	366	3	NNC	ENSG00000100121.14	novel	952	4	NA	NA	291	-59	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTCCCCTGTGAGCAGC	NA	False	NA	NA	False	NA	NA	NA	22647068	22647819	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_22647095_22647175_22647291_22647594
H1_mix_00059862	chr22	+	401	1	FSM	ENSG00000237472.1	ENST00000415639.1	319	1	8	-90	8	90	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CATAACGGTCAAAAAAAAAA	5803	False	NA	NA	False	AATAAA	-10	NA	22988270	22988671	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_22988300_22988700
H1_mix_00059864	chr22	+	2187	1	FSM	ENSG00000230701.2	ENST00000426721.2	2239	1	15	37	15	-37	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTTGATTGTTCACAGA	8131	False	NA	NA	False	NA	NA	NA	23262781	23264968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23262800_23265000
H1_mix_00059865	chr22	+	3338	6	FSM	ENSG00000186716.21	ENST00000436990.2	4188	6	850	0	850	0	multi-exon	FALSE	canonical	0	0	junction_2	214.358204881455	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACTTGCGTGCATGTTGAC	3577	False	NA	NA	False	ATTAAA	-14	NA	23310323	23318034	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23310434_23311696_23311919_23312886_23313022_23313967_23314074_23314551_23314715_23315432
H1_mix_00059866	chr22	+	1103	1	FSM	ENSG00000227755.1	ENST00000426024.1	163	1	4	-944	4	622	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATTGTAATTTTTGCAG	NA	False	NA	NA	False	AATAAA	-19	NA	23460352	23461455	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23460400_23461500
H1_mix_00059867	chr22	+	603	2	FSM	ENSG00000169314.15	ENST00000498542.5	588	2	-15	0	-15	0	multi-exon	FALSE	canonical	3	13	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCGAGCCATATATGTCCT	NA	False	NA	NA	False	GGGGCT	-37	NA	23763005	23764363	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23763332_23764086
H1_mix_00059868	chr22	+	2040	3	FSM	ENSG00000169314.15	ENST00000477921.1	2021	3	-19	0	12	0	multi-exon	FALSE	canonical	0	0	junction_2	6.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTGTCTTGGGTTATC	NA	False	NA	6	True	AATAAA	-13	NA	23763001	23765861	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23763332_23764086_23764174_23764238
H1_mix_00059869	chr22	+	879	6	FSM	ENSG00000169314.15	ENST00000402217.8	895	6	16	0	-15	0	multi-exon	FALSE	canonical	2	2	junction_3	3.74165738677394	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTCTTGGGTTATCTG	NA	False	NA	8	True	AATAAA	-15	NA	23763005	23765863	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23763332_23764086_23764174_23764259_23764398_23764638_23764714_23764792_23764903_23765720
H1_mix_00059870	chr22	+	644	2	FSM	ENSG00000099953.10	ENST00000465730.1	644	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGCCTTTACAAGAGACC	1	True	NA	NA	False	NA	NA	NA	23772845	23779697	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23772979_23779186
H1_mix_00059873	chr22	+	1659	4	FSM	ENSG00000099956.20	ENST00000491967.2	1642	4	-17	0	0	0	multi-exon	FALSE	canonical	3	1542	junction_2	200.180474128278	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCTGGGGTCTCTAGCAG	-20	True	NA	NA	False	NA	NA	NA	23786962	23802060	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23787263_23791755_23791868_23793558_23793689_23800943
H1_mix_00059874	chr22	+	889	6	FSM	ENSG00000099956.20	ENST00000417137.6	889	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	798.138183524633	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTTTGTGCCAGCCATCG	0	True	NA	NA	False	NA	NA	NA	23787026	23816833	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23787263_23791755_23791895_23793558_23793689_23800943_23801136_23803294_23803423_23816769
H1_mix_00059875	chr22	+	730	5	FSM	ENSG00000133460.20	ENST00000405847.5	730	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	10.7819293264239	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGGTATCAGTCAACAC	-1	True	NA	NA	False	NA	NA	NA	23856933	23877328	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23856992_23862103_23862203_23868480_23868642_23875116_23875242_23877041
H1_mix_00059876	chr22	+	1065	8	FSM	ENSG00000133460.20	ENST00000405286.6	1048	8	-17	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	9.67217764560615	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTATGGTGTTAAAATGC	-1	True	NA	24	True	ATTAAA	-15	NA	23856933	23882951	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23856992_23857420_23857532_23862103_23862203_23868480_23868642_23875116_23875242_23877041_23877172_23882458_23882647_23882758
H1_mix_00059877	chr22	+	1215	9	FSM	ENSG00000133460.20	ENST00000467660.5	1203	9	-12	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	11.0198684202671	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTATGGTGTTAAAATGCA	-1	True	NA	25	True	ATTAAA	-16	NA	23856933	23882952	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23856992_23857420_23857532_23862103_23862203_23868480_23868642_23875116_23875242_23877041_23877172_23877720_23877870_23882458_23882647_23882758
H1_mix_00059881	chr22	+	2667	3	NIC	ENSG00000133460.20	novel	3088	12	NA	NA	26	-10	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCCTACAATAATAATTGT	NA	False	NA	NA	False	AATAAA	-13	NA	23882985	23886299	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_23883874_23884301_23884430_23884648
H1_mix_00059882	chr22	+	589	2	FSM	ENSG00000240972.2	ENST00000465752.1	589	2	0	0	0	0	multi-exon	FALSE	canonical	3	24372	junction_1	0	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCGGGGTTCCTTGGCT	9	False	NA	24	True	AATAAA	-19	NA	23894449	23895227	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23894583_23894771
H1_mix_00059883	chr22	+	628	1	FSM	ENSG00000272787.1	ENST00000609736.1	663	1	-217	252	-217	-252	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCACCCTGGGAAACAAAGT	2098	False	NA	NA	False	NA	NA	NA	23968993	23969621	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_23969000_23969600
H1_mix_00059884	chr22	+	2358	3	ISM	ENSG00000099984.11	ENST00000621118.4	1112	6	977	10	977	-10	intron_retention	FALSE	canonical	3	5	junction_1	5.5	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTGAATAGAGAACCAAGA	966	False	NA	NA	False	AATAAA	-12	NA	23981099	23983901	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_+_23982779_23982870_23983045_23983396
H1_mix_00059888	chr22	+	2395	3	FSM	ENSG00000128271.22	ENST00000611543.4	2412	3	17	0	17	0	multi-exon	FALSE	canonical	0	0	junction_1	16	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGGCGTCTGAGTTCGT	6007	False	NA	29	True	AATAAA	-36	NA	24423613	24442356	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_24423629_24433130_24433737_24440582
H1_mix_00059889	chr22	+	907	2	FSM	ENSG00000128271.22	ENST00000486108.1	926	2	19	0	19	0	multi-exon	FALSE	canonical	3	26	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCCGGTGAGCAGGGCCG	18	False	NA	NA	False	NA	NA	NA	24423649	24433729	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_24423958_24433130
H1_mix_00059894	chr22	+	878	5	FSM	ENSG00000100031.19	ENST00000403838.5	1033	5	155	0	2	0	multi-exon	FALSE	canonical	3	93	junction_4	5.93190525885234	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGCCTCAGTGTATTGT	180	False	NA	34	True	NA	NA	NA	24627409	24629005	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_24627620_24627851_24627980_24628080_24628194_24628274_24628389_24628692
H1_mix_00059895	chr22	+	820	4	FSM	ENSG00000215481.9	ENST00000447261.6	1457	4	69	568	30	-568	multi-exon	FALSE	canonical	0	0	junction_1	31.8573208052543	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGATGAGATCTCAGAGTGC	5754	False	NA	NA	False	NA	NA	NA	24632983	24647192	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_24633444_24644739_24644800_24645635_24645746_24647002
H1_mix_00059896	chr22	+	415	1	FSM	ENSG00000224334.1	ENST00000409926.2	1165	1	49	701	49	-701	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGGTAGACTCTGGAGATA	125	False	NA	NA	False	NA	NA	NA	24686971	24687386	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_24687000_24687400
H1_mix_00059897	chr22	+	5946	25	FSM	ENSG00000167037.19	ENST00000400358.9	6701	25	27	728	27	6	multi-exon	TRUE	canonical	2	6	junction_11	4.44097086482474	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTGTCTTTTTTTT	-5	True	NA	21	True	TATAAA	-21	NA	24806237	24926850	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_24806345_24806440_24806485_24844896_24844973_24847633_24847797_24850279_24850433_24854995_24855064_24855284_24855431_24855548_24855681_24859715_24859841_24867092_24867161_24868375_24868540_24868722_24868856_24876576_24876716_24879461_24879527_24884052_24884199_24886599_24886729_24893430_24893614_24895222_24895292_24897971_24898560_24901832_24901958_24905104_24905188_24912642_24912753_24917657_24917755_24919825_24919994_24924185
H1_mix_00059898	chr22	+	5178	22	FSM	ENSG00000167037.19	ENST00000473458.5	5336	22	158	0	158	0	multi-exon	FALSE	canonical	0	0	junction_14	4.88089430859762	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGTCAGGAGTTTTGAG	NA	False	NA	NA	False	NA	NA	NA	24843617	24925137	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_24844973_24847633_24847797_24850279_24850433_24854995_24855064_24855284_24855431_24855548_24855681_24859715_24859841_24867092_24867161_24868375_24868540_24868722_24868856_24876576_24876716_24879461_24879527_24884052_24884199_24886599_24886729_24895222_24895292_24897971_24898560_24901832_24901958_24905104_24905188_24912642_24912753_24917657_24917755_24919825_24919994_24924185
H1_mix_00059901	chr22	+	840	6	FSM	ENSG00000100058.13	ENST00000354451.6	1560	6	0	720	0	-720	multi-exon	FALSE	canonical	1	2	junction_4	104.545492490112	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGAACATGTGTTGAA	7539	False	NA	NA	False	AATATA	-23	NA	25455717	25510908	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_25455841_25457258_25457402_25459415_25459516_25509182_25509343_25510036_25510071_25510628
H1_mix_00059902	chr22	+	2836	1	FSM	ENSG00000100058.13	ENST00000609513.1	2819	1	23	-40	23	37	mono-exon	FALSE	NA	NA	NA	NA	NA	706	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGGTTCTCCAAAGAAAC	NA	False	NA	41	True	NA	NA	NA	25518057	25520893	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_25518100_25520900
H1_mix_00059903	chr22	+	813	7	NNC	ENSG00000100104.13	novel	4020	7	NA	NA	-10	0	at_least_one_novel_splicesite	TRUE	canonical	3	207	junction_1	21.9120717616771	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATCTATCTGAATAAAGGG	-24	True	NA	NA	False	NA	NA	NA	26483866	26491070	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_26483984_26484004_26484100_26486022_26486064_26488028_26488289_26488389_26488489_26490043_26490199_26491024
H1_mix_00059905	chr22	+	848	1	FSM	ENSG00000225783.9	ENST00000656640.1	944	1	15	81	2	-81	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGACAAAAAAGTAGGCTTCT	18	False	NA	NA	False	NA	NA	NA	26646453	26647301	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_26646500_26647300
H1_mix_00059906	chr22	+	4179	5	NIC	ENSG00000225783.9	novel	594	4	NA	NA	8	0	intron_retention	FALSE	canonical	2	9	junction_1	6.97764286847643	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CTTAAAAAAAAAAAAAAAAA	10001	False	NA	NA	False	NA	NA	NA	26657233	26670599	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_26657355_26663315_26663399_26665530_26666938_26667184_26667311_26668157
H1_mix_00059908	chr22	+	3908	2	FSM	ENSG00000225783.9	ENST00000665574.1	4019	2	111	0	111	0	multi-exon	FALSE	canonical	3	21	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CTTAAAAAAAAAAAAAAAAA	2133	False	NA	NA	False	NA	NA	NA	26665471	26670599	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_26666938_26668157
H1_mix_00059910	chr22	+	4805	4	FSM	ENSG00000235954.8	ENST00000453632.6	4790	4	-15	0	4	0	multi-exon	FALSE	canonical	2	10	junction_2	5.90668171555645	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAAACCCATATGGTTTT	-1	True	NA	-88	True	NA	NA	NA	27919407	28002588	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_27919546_27935150_27935231_27997410_27998839_27999429
H1_mix_00059913	chr22	+	1051	6	FSM	ENSG00000100209.11	ENST00000450178.5	1048	6	-3	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	50.736180384416	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTATATTTCTTTTCT	-16	True	NA	6	True	AATAAA	-17	NA	28742038	28757510	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_28742332_28743881_28743924_28744614_28744705_28745863_28746009_28751240_28751289_28757077
H1_mix_00059916	chr22	+	605	1	FSM	ENSG00000226471.7	ENST00000585003.1	516	1	51	-140	51	140	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCGCTTCGGCCTCTATT	45	False	NA	NA	False	NA	NA	NA	28800759	28801364	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_28800800_28801400
H1_mix_00059917	chr22	+	696	1	FSM	ENSG00000272858.1	ENST00000607919.1	749	1	-153	206	-153	-206	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAATGCAGATTCCCCAA	NA	False	NA	NA	False	NA	NA	NA	28814760	28815456	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_28814800_28815500
H1_mix_00059918	chr22	+	5907	7	NIC	ENSG00000183762.13	novel	6181	9	NA	NA	-8	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	6.1913918736689	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGATGGGCCCTATGCT	-18	True	NA	5	True	AATAAA	-20	NA	29073026	29146817	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_29073228_29094257_29094421_29098861_29098954_29137341_29137675_29138623_29138783_29140281_29140367_29141943
H1_mix_00059919	chr22	+	2134	15	FSM	ENSG00000186998.16	ENST00000404820.7	2118	15	-16	0	0	0	multi-exon	FALSE	canonical	3	12	junction_13	31.6847513701426	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTCAGTGTGTGCT	-25	True	NA	17	True	AATAAA	-23	NA	29205895	29259597	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29206140_29214925_29215040_29215526_29215631_29225132_29225217_29226489_29226552_29231019_29231141_29231592_29231683_29232255_29232403_29233378_29233469_29233613_29233667_29234136_29234200_29234304_29234350_29243444_29243490_29255270_29255362_29258816
H1_mix_00059920	chr22	+	752	4	NNC	ENSG00000186998.16	novel	641	6	NA	NA	-2	-14995	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	46.9065264352651	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACGGCTCACAGGTGTT	-17	True	NA	4	True	NA	NA	NA	29205903	29216620	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_29206140_29214925_29215040_29215526_29215631_29216322
H1_mix_00059923	chr22	+	560	5	FSM	ENSG00000182944.18	ENST00000444626.5	560	5	0	0	0	0	multi-exon	FALSE	canonical	3	393	junction_2	1877.05505713072	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTGCCCCCCAGGCATAC	1	False	NA	NA	False	NA	NA	NA	29268008	29278041	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29268350_29272215_29272253_29272385_29272432_29273740_29273865_29278029
H1_mix_00059927	chr22	+	2192	18	FSM	ENSG00000182944.18	ENST00000414183.6	2189	18	-3	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	1345.36162026176	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTTTTTTTTCTTCCTTC	-3	True	NA	23	True	ATTAAA	-23	NA	29268312	29300343	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273740_29273865_29274264_29274283_29278029_29278217_29282389_29282558_29286922_29287135_29288605_29288787_29291564_29291600_29292136_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299852_29300121
H1_mix_00059928	chr22	+	2478	17	FSM	ENSG00000186575.19	ENST00000672805.1	2478	17	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	59.6163515740438	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCCCTCTTATGTGCA	-41	True	NA	NA	False	NA	NA	NA	29603567	29694945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29604113_29628657_29628774_29636750_29636877_29639089_29639213_29642201_29642286_29654656_29654726_29655593_29655677_29658188_29658265_29661204_29661340_29664989_29665065_29668332_29668447_29671825_29671949_29673268_29673487_29674835_29674942_29678195_29678324_29681438_29681602_29694751
H1_mix_00059930	chr22	+	8913	20	FSM	ENSG00000100330.16	ENST00000333027.7	8906	20	-8	1	-8	-1	multi-exon	FALSE	canonical	3	20	junction_17	24.6303418492758	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCAATCTCCTCCTTTT	-21	True	NA	14	True	AATAAA	-16	NA	29883160	30030865	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29883360_29957035_29957089_29970975_29971063_29978441_29978532_29978935_29979053_29988479_29988563_29991503_29991671_29998760_29998858_30002879_30002994_30007113_30007320_30007900_30008033_30009017_30009130_30012367_30012564_30013355_30013542_30016527_30016699_30017926_30018073_30019479_30020885_30022608_30022698_30023456_30023484_30025629
H1_mix_00059933	chr22	+	547	2	FSM	ENSG00000100330.16	ENST00000480776.1	547	2	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTCTTGTTAATGTAAG	NA	False	NA	NA	False	NA	NA	NA	29978086	29979037	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_29978532_29978935
H1_mix_00059935	chr22	+	697	6	FSM	ENSG00000100003.18	ENST00000452649.1	674	6	-23	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	12.7968746184371	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTAAAGGTAAGTTGGGA	-30	True	NA	NA	False	NA	NA	NA	30396994	30409477	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30397171_30406341_30406386_30407094_30407155_30407414_30407604_30409106_30409283_30409425
H1_mix_00059937	chr22	+	655	2	FSM	ENSG00000242114.6	ENST00000614920.1	648	2	-7	0	0	0	multi-exon	FALSE	canonical	3	588	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCGCCAGGGTGACTGTG	-2	True	NA	NA	False	NA	NA	NA	30425767	30427192	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30425947_30426716
H1_mix_00059941	chr22	+	3047	1	FSM	ENSG00000237977.1	ENST00000424380.1	563	1	-231	-2253	-231	2253	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAGGCAGGAGAGTTGCT	NA	False	NA	NA	False	NA	NA	NA	30901987	30905034	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30902000_30905000
H1_mix_00059942	chr22	+	6503	3	NIC	ENSG00000253352.10	novel	7469	3	NA	NA	11	0	intron_retention	FALSE	canonical	1	6	junction_2	98.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTGCTTACTGTTTGAC	627	False	NA	NA	False	AATAAA	-18	NA	30970192	30979395	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_30971780_30972854_30973588_30975212
H1_mix_00059944	chr22	+	537	4	FSM	ENSG00000183963.19	ENST00000422839.5	566	4	29	0	29	0	multi-exon	FALSE	canonical	1	1	junction_1	30.408332191468	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGGCAGGAGCTGGAGCG	16	True	NA	NA	False	NA	NA	NA	31064146	31088024	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31064188_31080449_31080755_31083178_31083310_31087964
H1_mix_00059947	chr22	+	1263	9	FSM	ENSG00000183963.19	ENST00000624247.1	1263	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	37.5297798421467	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGACTCCTCTCTGCGTC	1919	False	NA	28	True	GATAAA	-18	NA	31095559	31104624	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31095610_31096732_31096898_31096997_31097061_31097268_31097339_31098666_31098841_31099064_31099180_31099744_31099897_31100884_31101050_31104315
H1_mix_00059949	chr22	+	2946	5	FSM	ENSG00000138942.17	ENST00000266252.8	2946	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	74.6939589257391	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATGAGCTTGGACTTCTT	30	True	NA	-1	True	ATTAAA	-17	NA	31160242	31207012	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31160304_31187046_31187271_31192683_31192703_31201497_31201616_31204488
H1_mix_00059950	chr22	+	1466	3	FSM	ENSG00000182541.18	ENST00000462625.1	1042	3	-14	-410	-14	410	multi-exon	FALSE	canonical	3	174	junction_2	11	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCCCAGTGGGAGGCACT	907	False	NA	NA	False	NA	NA	NA	31212224	31259456	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31212425_31225719_31225820_31258290
H1_mix_00059953	chr22	+	1910	1	FSM	ENSG00000213888.3	ENST00000504184.3	1943	1	-22	55	-22	-55	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGAGCAAAACTGTTTC	-8	True	NA	NA	False	NA	NA	NA	31346754	31348664	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31346800_31348700
H1_mix_00059954	chr22	+	3938	32	NIC	ENSG00000198089.16	novel	4031	33	NA	NA	-27	22	combination_of_known_junctions	FALSE	canonical	3	43	junction_3	31.6202098205356	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCTCCAGGAACAGAACAC	149	False	NA	-50	True	NA	NA	NA	31496436	31618468	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_31496638_31508254_31508377_31528689_31528864_31546860_31546972_31550253_31550349_31556941_31557060_31561289_31561393_31573057_31573215_31575230_31575393_31578381_31578453_31580271_31580365_31583874_31583973_31585067_31585135_31589446_31589578_31602211_31602294_31602606_31602786_31603743_31603820_31604308_31604405_31604868_31604946_31606327_31606431_31607936_31608034_31611142_31611304_31611765_31611841_31613141_31613217_31613353_31613531_31613601_31613856_31614788_31614861_31615047_31615280_31616744_31616878_31616999_31617079_31618114_31618227_31618313
H1_mix_00059961	chr22	+	5365	42	FSM	ENSG00000100150.20	ENST00000644331.1	5383	42	18	0	-2	0	multi-exon	TRUE	canonical	3	18	junction_1	33.0553768954669	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAATAAAGAGCTCCACGT	NA	False	NA	-20	True	NA	NA	NA	31753929	31906989	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31753997_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813_31768864_31778098_31778169_31783906_31783986_31784813_31784876_31792032_31792103_31792744_31792818_31797599_31797704_31798581_31798657_31802703_31802839_31804161_31804224_31804841_31804916_31806121_31806192_31809610_31809648_31810520_31810642_31814991_31815213_31819021_31819226_31821501_31821638_31822692_31822791_31833914_31833981_31836971_31837156_31838684_31838846_31843094_31843213_31843644_31843813_31845017_31845238_31846833_31846968_31857444_31857554_31870589_31870745_31873254_31873333_31874272_31874406_31876156_31876266_31879524_31879753_31893581_31893752_31897481_31897654_31901741_31901803_31905983_31906067_31906204
H1_mix_00059964	chr22	+	266	1	FSM	ENSG00000273325.1	ENST00000608926.1	449	1	-95	278	-95	-278	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGGGTGAGGATCCAGCA	NA	False	NA	NA	False	NA	NA	NA	32284587	32284853	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_32284600_32284900
H1_mix_00059965	chr22	+	1201	2	FSM	ENSG00000128276.10	ENST00000249007.4	1488	2	287	0	287	0	multi-exon	FALSE	canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAATGCATCATGTGATTT	417	False	NA	NA	False	AATAAA	-14	NA	32358153	32361161	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_32358445_32360251
H1_mix_00059966	chr22	+	830	1	FSM	ENSG00000232218.1	ENST00000453679.1	201	1	-318	-311	-318	311	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGAGCGAGACTCAGTCT	NA	False	NA	NA	False	NA	NA	NA	32386349	32387179	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_32386300_32387200
H1_mix_00059967	chr22	+	1257	4	FSM	ENSG00000100281.14	ENST00000420166.5	1257	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	24.8327740429189	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAGGACAAAGAGAGAGA	NA	False	NA	4	True	AAAAAG	-10	NA	35257451	35265570	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_35257558_35263077_35263227_35263795_35263875_35264647
H1_mix_00059968	chr22	+	4101	11	FSM	ENSG00000100281.14	ENST00000216106.6	4095	11	-6	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	32.7420219290135	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTCTCAGCTGTCTTT	-5	True	NA	35	True	AATAAA	-45	NA	35257486	35295807	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_35257558_35262322_35262422_35263077_35263227_35263795_35263875_35264647_35265604_35283961_35284044_35285996_35286062_35287346_35287453_35288237_35288408_35292991_35293115_35293606
H1_mix_00059969	chr22	+	480	3	FSM	ENSG00000100281.14	ENST00000464480.1	559	3	79	0	79	0	multi-exon	FALSE	canonical	3	38	junction_2	27.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCGTCACAGAAGAAAAAGA	5350	False	NA	NA	False	NA	NA	NA	35262841	35264663	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_35263227_35263795_35263875_35264647
H1_mix_00059970	chr22	+	599	2	FSM	ENSG00000100284.22	ENST00000465529.1	555	2	-26	-18	-16	18	multi-exon	FALSE	canonical	3	248	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTCCGGCTTTTCTGCGA	-37	True	NA	NA	False	NA	NA	NA	35299839	35318334	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_35299981_35317876
H1_mix_00059971	chr22	+	395	3	FSM	ENSG00000100284.22	ENST00000487670.1	849	3	-5	459	0	-459	multi-exon	FALSE	canonical	3	248	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTAGGCAACGCACTGT	-11	True	NA	NA	False	NA	NA	NA	35299865	35322153	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_35299981_35317876_35317962_35321958
H1_mix_00059973	chr22	+	2229	14	FSM	ENSG00000100284.22	ENST00000424387.5	2211	14	-18	0	0	0	multi-exon	TRUE	canonical	2	11	junction_1	62.4283731579474	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCATTGTCAAGTCTCCT	-11	True	NA	21	True	ATTAAA	-21	NA	35299865	35347981	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_35299981_35321958_35322038_35323027_35323178_35323495_35323631_35323767_35323915_35327270_35327388_35330346_35330481_35332980_35333015_35333403_35333498_35334327_35334449_35338712_35338789_35345724_35345785_35346929_35346970_35347054
H1_mix_00059974	chr22	+	2246	15	NIC	ENSG00000100284.22	novel	2390	15	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	77.7354553624545	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCTAGCAGCATTGTCA	29	True	NA	13	True	ATTAAA	-13	NA	35299905	35347973	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_35299981_35317876_35317962_35321958_35322038_35323027_35323178_35323518_35323631_35323767_35323915_35327270_35327388_35330346_35330481_35332980_35333015_35333403_35333498_35334327_35334449_35338712_35338789_35345724_35345785_35346929_35346973_35347054
H1_mix_00059977	chr22	+	2646	7	ISM	ENSG00000100379.18	ENST00000402077.8	1691	8	-76	16	-76	0	intron_retention	FALSE	canonical	3	67	junction_6	38.0193664100577	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAGGAACAGCCCAGCCT	NA	False	NA	12	True	AATAAA	-3	NA	37051662	37063374	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_+_37051950_37053099_37053209_37056319_37056412_37057397_37057494_37059312_37059439_37060822_37060923_37061538
H1_mix_00059978	chr22	+	1767	9	FSM	ENSG00000100379.18	ENST00000403888.8	1760	9	-23	16	-20	0	multi-exon	FALSE	canonical	3	14	junction_7	61.7149445029322	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAGGAACAGCCCAGCCT	8	False	NA	12	True	AATAAA	-3	NA	37051718	37063374	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37051950_37053099_37053209_37056319_37056412_37057397_37057494_37059312_37059439_37060822_37060923_37061103_37061176_37061538_37061630_37062524
H1_mix_00059983	chr22	+	927	9	FSM	ENSG00000100083.19	ENST00000449944.5	927	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	87.40843423263	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGAGCGGATGCGGCCC	93	False	NA	NA	False	NA	NA	NA	37608947	37623564	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37609155_37614189_37614275_37616921_37616998_37618447_37618547_37620237_37620362_37620812_37620914_37621615_37621697_37623326_37623468_37623551
H1_mix_00059989	chr22	+	1513	9	NNC	ENSG00000100116.17	novel	1473	9	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_7	112.706407870183	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGGTCTGCTTTATTG	3	True	NA	28	True	NA	NA	NA	37807935	37816897	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_37808164_37810026_37810158_37812886_37812989_37813462_37813610_37815125_37815281_37815417_37815501_37815662_37815877_37816199_37816322_37816566
H1_mix_00059993	chr22	+	499	2	FSM	ENSG00000100129.18	ENST00000460638.1	348	2	0	-151	0	0	multi-exon	FALSE	canonical	3	2732	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGCTGGAGTGCAGTAG	1771	False	NA	84	True	NA	NA	NA	37886703	37888782	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37886846_37888425
H1_mix_00059997	chr22	+	1920	12	NIC	ENSG00000100151.16	novel	2058	13	NA	NA	2	-3	combination_of_known_splicesites	FALSE	canonical	3	11	junction_6	45.556794088295	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGGTCGCAGTGGCTTC	8	True	NA	25	True	AATAAA	-17	NA	38057484	38075698	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_38057588_38057752_38057851_38059233_38059346_38065001_38065131_38067703_38067771_38069032_38069123_38071681_38071745_38072476_38072611_38072999_38073093_38073772_38073824_38074306_38074452_38074863
H1_mix_00060003	chr22	+	420	4	NIC	ENSG00000100211.11	novel	615	5	NA	NA	-1	-22	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	134.942786230148	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGATCCCCGACTATGAAC	17	True	NA	NA	False	NA	NA	NA	38656674	38670923	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_38656751_38656955_38657144_38668016_38668133_38670883
H1_mix_00060011	chr22	+	2382	3	FSM	ENSG00000100321.15	ENST00000216155.11	497	3	-7	-1878	-7	0	multi-exon	FALSE	canonical	2	7	junction_2	306	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTTTGTGCCTAGTGAT	-29	True	NA	18	True	AGTAAA	-14	NA	39349941	39377911	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_39350110_39374315_39374554_39375935
H1_mix_00060013	chr22	+	1958	11	FSM	ENSG00000100324.14	ENST00000331454.3	1660	11	-18	-280	-12	43	multi-exon	FALSE	canonical	1	2	junction_10	26.9794366138361	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACATTAAAATTTCTCTT	-9	True	NA	NA	False	ATTAAA	-40	NA	39399765	39437103	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_39399836_39415005_39415143_39415499_39415654_39416790_39416878_39417710_39417850_39418731_39418846_39419518_39419631_39421826_39421972_39426702_39426926_39428020_39428184_39436489
H1_mix_00060026	chr22	+	2770	22	NNC	ENSG00000100359.21	novel	2986	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_19	105.740537281072	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGCTAGTAGGCTCCTGG	16	True	NA	-40	True	NA	NA	NA	40370638	40410047	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_40370689_40400695_40400814_40401592_40401676_40402138_40402206_40404246_40404456_40404556_40404665_40405140_40405285_40405648_40405845_40406077_40406224_40406437_40406663_40407016_40407072_40407200_40407329_40407412_40407569_40407788_40407844_40408070_40408121_40408276_40408430_40408626_40408698_40408773_40408843_40408932_40409019_40409198_40409373_40409464_40409526_40409681
H1_mix_00060032	chr22	+	1871	2	FSM	ENSG00000100387.9	ENST00000467617.1	1871	2	0	0	0	0	multi-exon	FALSE	canonical	3	3085	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGGATGCTCTCTCTTGTG	5095	False	NA	25	True	AATAAA	-18	NA	40966200	40972662	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_40967885_40972475
H1_mix_00060036	chr22	+	3045	16	NIC	ENSG00000100395.15	novel	3189	17	NA	NA	-1	-1	combination_of_known_junctions	TRUE	canonical	2	8	junction_2	57.5841027444979	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCCCGTTTGTTAGATCT	-2	True	NA	11	True	ATTAAA	-15	NA	41205319	41231269	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_41205387_41209695_41209934_41216138_41216263_41217122_41217203_41219418_41219537_41220733_41220869_41221198_41221288_41224019_41224252_41224724_41224802_41224966_41225072_41225793_41225942_41226661_41226745_41227088_41227324_41227803_41227870_41229539_41229657_41230138
H1_mix_00060039	chr22	+	3230	17	FSM	ENSG00000100412.17	ENST00000678600.1	3230	17	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_14	41.4927986974848	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTGTGAGTGATTGGTG	-21	True	NA	22	True	AAAACA	-20	NA	41469105	41528979	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41469183_41499725_41499863_41507790_41508050_41511875_41511969_41515376_41515536_41515766_41515918_41517526_41517632_41518480_41518573_41520170_41520277_41522829_41522988_41523204_41523279_41523829_41523942_41524845_41524969_41525192_41525349_41526261_41526454_41527287_41528023_41528478
H1_mix_00060040	chr22	+	2902	18	NIC	ENSG00000100412.17	novel	3355	19	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	108.125743792069	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTGTTCTGTGAGTGAT	2	True	NA	17	True	AAAACA	-15	NA	41469128	41528974	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_41469183_41499545_41499863_41507790_41508050_41511875_41511969_41515376_41515536_41515766_41515918_41517526_41517632_41518480_41518573_41520170_41520277_41522829_41522988_41523204_41523279_41523829_41523942_41524845_41524969_41525192_41525349_41526261_41526454_41527287_41527421_41527900_41528023_41528478
H1_mix_00060045	chr22	+	2126	13	NNC	ENSG00000196419.13	novel	2122	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1504.64981160254	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTATATACTGTTCTTTTG	-14	True	NA	9	True	AATAAA	-15	NA	41621284	41664034	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_41621346_41621989_41622087_41628117_41628231_41636112_41636252_41636515_41636771_41637607_41637794_41646896_41647083_41650722_41650892_41653528_41653691_41656902_41657033_41658251_41658353_41661330_41661445_41663621
H1_mix_00060054	chr22	+	596	3	FSM	ENSG00000183569.18	ENST00000472589.1	596	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	2.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGCCCCCCCCCCCCAA	909	False	NA	NA	False	NA	NA	NA	42554908	42555966	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_42555088_42555231_42555346_42555663
H1_mix_00060056	chr22	+	2448	8	FSM	ENSG00000100347.15	ENST00000474323.5	2368	8	0	-80	0	80	multi-exon	TRUE	canonical	3	447	junction_1	601.355781139754	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCCGCCCAGTGTCTGCG	NA	False	NA	106	True	NA	NA	NA	43974594	43996609	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_43976184_43976749_43976822_43977871_43977959_43981390_43981462_43983932_43984001_43989110_43989258_43990264_43990407_43996337
H1_mix_00060060	chr22	+	2125	4	FSM	ENSG00000186654.21	ENST00000495017.5	2125	4	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_2	38.2709637540873	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGTCTGCAGTGCCTGC	5617	False	NA	9	True	AATAAA	-15	NA	44730883	44737681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_44731822_44732250_44732392_44735026_44735163_44736771
H1_mix_00060061	chr22	+	1487	11	FSM	ENSG00000241484.10	ENST00000336963.8	1487	11	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_10	94.8082802291024	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTAGGATGGATGTTTT	30	False	NA	120	True	NA	NA	NA	44752602	44862788	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_44752628_44786456_44786607_44802076_44802165_44808306_44808439_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44862274
H1_mix_00060062	chr22	+	1474	10	FSM	ENSG00000241484.10	ENST00000389772.8	1474	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	100.792905884012	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTGTTAGGATGGATG	11	False	NA	116	True	NA	NA	NA	44786456	44862784	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_44786607_44808306_44808439_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44859730_44859835_44862274
H1_mix_00060075	chr22	+	4896	11	Fusion	ENSG00000075218.19_ENSG00000100416.15	novel	2983	12	NA	NA	17	0	intron_retention	FALSE	canonical	0	0	junction_1	68.391227507627	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCTCAGGTACTTTGGG	-14	True	NA	10	True	AATAAA	-16	NA	46296886	46333699	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr22_+_46297480_46308318_46308944_46312140_46312306_46313889_46314014_46316031_46316413_46323189_46323263_46326435_46326655_46328687_46328890_46329357_46329568_46330046_46331733_46333081
H1_mix_00060086	chr22	+	1656	11	NIC	ENSG00000100416.15	novel	1258	11	NA	NA	5	-1	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	135.623338699503	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACACATAGTCTGATCGC	179	False	NA	15	True	AATAAA	-11	NA	46335962	46357334	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_46336107_46337778_46337945_46343261_46343369_46346421_46346545_46350290_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
H1_mix_00060089	chr22	+	2933	2	FSM	ENSG00000100416.15	ENST00000491612.1	2933	2	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATAGTCTGATCGCTGC	NA	False	NA	18	True	AATAAA	-14	NA	46352828	46357337	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_46353868_46355443
H1_mix_00060090	chr22	+	1860	2	FSM	ENSG00000100416.15	ENST00000470831.1	1860	2	0	0	0	0	multi-exon	FALSE	canonical	3	405	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATAGTCTGATCGCTGCT	NA	False	NA	19	True	AATAAA	-15	NA	46354709	46357338	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_46356073_46356841
H1_mix_00060096	chr22	+	2423	9	FSM	ENSG00000170638.10	ENST00000463233.1	2404	9	-19	0	-14	0	multi-exon	FALSE	canonical	3	99	junction_1	101.907356824716	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTTTTGTGACGTGTG	-19	True	NA	16	True	AATAAA	-16	NA	50185898	50199595	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_50186002_50193026_50193094_50193575_50193655_50194339_50194507_50194899_50195041_50197240_50197352_50197448_50197589_50197822_50198187_50198344
H1_mix_00060098	chr22	+	1628	10	FSM	ENSG00000170638.10	ENST00000395829.1	1628	10	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_9	124.474897067642	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGAAATAAATTCTAATTT	371	False	NA	-10	True	NA	NA	NA	50193013	50199569	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_50193094_50193575_50193655_50194339_50194507_50194899_50195041_50197240_50197352_50197448_50197589_50197822_50197996_50198074_50198187_50198344_50198516_50199115
H1_mix_00060099	chr22	+	2220	9	NNC	ENSG00000073169.15	novel	2283	9	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	80.5356093600837	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTCTCTGTGGTCATT	-11	True	NA	16	True	AATAAA	-16	NA	50201010	50217615	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_50201591_50206320_50206463_50208535_50208717_50210180_50210312_50210630_50210912_50215716_50215868_50216690_50216877_50216971_50217129_50217204
H1_mix_00060100	chr22	+	1626	8	FSM	ENSG00000073169.15	ENST00000492092.1	1626	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	73.831578886113	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTCTCTGTGGTCATTG	1624	False	NA	17	True	AATAAA	-17	NA	50206441	50217616	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_50206521_50208487_50208717_50210180_50210312_50210630_50210912_50215716_50215868_50216690_50216877_50216971_50217129_50217204
H1_mix_00060101	chr22	+	4032	23	FSM	ENSG00000100239.16	ENST00000359139.7	4035	23	3	0	3	0	multi-exon	FALSE	canonical	1	3	junction_22	70.2824878556071	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCGTACTGTGAACCTTCC	-18	True	NA	20	True	AATAAA	-21	NA	50343306	50445090	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_50343551_50372019_50372151_50393892_50394136_50406688_50406876_50414551_50414690_50416091_50416158_50418866_50418980_50419348_50419463_50422253_50422381_50423461_50423615_50431172_50431383_50432264_50432330_50434965_50435082_50436366_50436453_50437505_50437604_50437842_50437901_50438173_50438299_50438598_50438763_50439697_50439858_50439960_50440050_50440821_50441027_50443865_50444118_50444202
H1_mix_00060103	chr22	+	4206	3	FSM	ENSG00000128165.9	ENST00000395737.2	4213	3	0	7	0	-7	multi-exon	FALSE	canonical	1	2	junction_1	17.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTAACAAGTCCTCAGAA	4	True	NA	NA	False	AATAAA	-13	NA	50481542	50486430	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_50481764_50481836_50481958_50482566
H1_mix_00060105	chr22	+	2037	20	NNC	ENSG00000025770.19	novel	1996	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_6	79.6989835433259	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCCCCCTAAAAACCCTT	-16	True	NA	24	True	AATAAA	-18	NA	50508223	50523472	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_50508446_50516446_50516549_50517426_50517483_50517576_50517662_50517740_50517810_50517972_50518053_50518127_50518279_50518648_50518733_50519189_50519321_50520964_50521037_50521542_50521610_50521740_50521849_50521985_50522040_50522180_50522252_50522342_50522416_50522497_50522570_50522670_50522721_50522820_50522923_50523016_50523167_50523234
H1_mix_00060110	chr22	+	694	4	FSM	ENSG00000184319.17	ENST00000494075.5	857	4	0	163	0	0	multi-exon	FALSE	canonical	2	4	junction_3	31.0590834807897	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTGTAATTTTAGTGT	-11	True	NA	NA	False	ATTAAA	-32	NA	50783796	50789190	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_50784022_50785172_50785294_50788749_50788799_50788891
H1_mix_00060111	chr22	+	786	3	FSM	ENSG00000184319.17	ENST00000686213.1	784	3	9	-11	1	0	multi-exon	FALSE	canonical	3	45	junction_2	17.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTGTAATTTTAGTGT	-10	True	NA	NA	False	ATTAAA	-32	NA	50783797	50789190	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_50784022_50785172_50785294_50788749
H1_mix_00060114	chr22	-	2156	7	NNC	ENSG00000069998.12	novel	1799	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	129	junction_4	358.060050829466	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGAGATGTGGGGCTTT	-20	True	NA	-18	True	NA	NA	NA	17159277	17137581	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_17138358_17138549_17138739_17141058_17141234_17143097_17143755_17145023_17145118_17148447_17148561_17159125
H1_mix_00060116	chr22	-	1992	5	FSM	ENSG00000015475.19	ENST00000614949.4	1988	5	0	-4	0	0	multi-exon	FALSE	canonical	3	9	junction_3	238.445355375189	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCATGTTTTGGAGTGG	-4	True	NA	0	True	AATAAA	-18	NA	17774495	17734137	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_17735592_17738016_17738230_17739348_17739489_17750104_17750175_17774380
H1_mix_00060117	chr22	-	4488	8	NIC	ENSG00000093100.13	novel	4328	5	NA	NA	-6508	3	combination_of_known_splicesites	FALSE	canonical	2	7	junction_5	3.45820526768863	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGTGTTTCTTAAGTCAT	165	False	NA	-18	True	AATAAA	-16	NA	17818005	17787648	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_17790917_17790997_17791072_17791201_17791302_17808843_17808938_17810702_17810814_17812506_17812558_17816689_17816785_17817310
H1_mix_00060118	chr22	-	6817	6	FSM	ENSG00000243156.9	ENST00000580469.1	3622	6	-10	-3185	-10	-3	multi-exon	FALSE	canonical	2	7	junction_5	3.61109401705356	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGTGTGTTTCTTAAGT	2491	False	NA	-21	True	AATAAA	-13	NA	17815679	17787651	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_17790917_17790997_17791072_17791201_17791302_17808843_17808938_17810702_17810814_17812506
H1_mix_00060119	chr22	-	1291	1	FSM	ENSG00000243156.9	ENST00000578905.1	2532	1	1203	38	1203	-38	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACACTCCAGCCTGGGAG	790	False	NA	NA	False	NA	NA	NA	17841279	17839988	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_17840000_17841300
H1_mix_00060120	chr22	-	7563	19	NIC	ENSG00000243156.9	novel	9447	32	NA	NA	-31	8	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	3.80383172636082	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTTTTTCTTTTCC	148	False	NA	1	True	AATAAA	-19	NA	18001532	17860154	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_17864987_17865923_17866013_17871836_17872024_17885877_17886052_17887169_17887233_17887322_17887436_17889033_17889231_17891484_17891633_17893807_17893905_17895283_17895411_17896245_17896362_17896723_17896982_17899447_17899549_17900841_17900998_17901877_17901980_17902630_17902748_17904631_17904840_17906548_17906887_18001392
H1_mix_00060121	chr22	-	1699	1	FSM	ENSG00000225335.3	ENST00000607927.1	1699	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTCTCTTTTGTTCA	-4	False	NA	NA	False	TATAAA	-16	NA	18078884	18077185	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_18077200_18078900
H1_mix_00060122	chr22	-	1790	4	NNC	ENSG00000274602.5	novel	1787	4	NA	NA	15	-3	intron_retention	FALSE	canonical	3	3	junction_3	96.9260886792956	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCTGTGAGGTTTTGTGT	NA	False	NA	NA	False	AATAAA	-23	NA	18537850	18533648	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_18534054_18535244_18535329_18535858_18535949_18536639
H1_mix_00060123	chr22	-	1340	5	ISM	ENSG00000274602.5	ENST00000652586.1	2139	17	14626	1	-36	0	3prime_fragment	FALSE	canonical	3	87	junction_3	51.3438165702551	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTTGGAATCTGTGAGG	NA	False	NA	NA	False	AATAAA	-15	NA	18537901	18533656	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_-_18534054_18535244_18535329_18535858_18535949_18536649_18536809_18537291
H1_mix_00060124	chr22	-	287	3	ISM	ENSG00000274602.5	ENST00000617243.4	2340	14	7880	4983	-2608	-584	internal_fragment	FALSE	canonical	3	75	junction_2	18.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTCCCTGAGTGGAGC	NA	False	NA	NA	False	NA	NA	NA	18540473	18538639	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_-_18538745_18539227_18539338_18540401
H1_mix_00060125	chr22	-	2568	9	FSM	ENSG00000100033.17	ENST00000429300.5	2567	9	0	-1	0	0	multi-exon	TRUE	canonical	2	7	junction_5	145.79266099499	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGAGCCCTTTGCCCTC	1519	False	NA	NA	False	AATAAA	-15	NA	18924002	18912780	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_18913363_18913437_18913527_18916889_18916989_18918315_18918492_18919450_18919632_18919705_18919799_18921341_18921424_18922324_18922405_18922816
H1_mix_00060126	chr22	-	2034	14	FSM	ENSG00000100033.17	ENST00000420436.5	2034	14	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_13	129.067570945697	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGAGCCCTTTGCCCTC	-4	True	NA	NA	False	AATAAA	-15	NA	18936296	18912780	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_18913363_18913437_18913527_18916889_18916989_18918315_18918492_18919450_18919598_18919705_18919799_18921341_18921424_18922324_18922405_18922816_18922934_18923114_18923180_18925050_18925201_18925687_18925723_18930989_18931182_18936169
H1_mix_00060128	chr22	-	4818	11	FSM	ENSG00000070413.20	ENST00000389262.8	4814	11	0	-4	0	0	multi-exon	TRUE	canonical	1	1	junction_6	228.173377062268	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTTAGTCCTTGGTGTG	6	True	NA	-1	True	AATAAA	-19	NA	19122407	19036281	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19039122_19041057_19041295_19041806_19041960_19048439_19048644_19056985_19057163_19060565_19060956_19063201_19063279_19064847_19065059_19068099_19068226_19089367_19089491_19122127
H1_mix_00060129	chr22	-	4348	9	NIC	ENSG00000070413.20	novel	4814	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_8	181.939507460584	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCATGGTTAGTCCTTGG	NA	False	NA	-5	True	AATAAA	-15	NA	19122454	19036285	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_19039122_19041057_19041295_19041806_19041960_19048439_19048644_19056985_19057163_19063201_19063279_19064847_19065059_19068099_19068226_19122127
H1_mix_00060130	chr22	-	1486	10	NNC	ENSG00000100075.10	novel	1548	9	NA	NA	0	72171	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	609.974700952809	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTATTGTGGTAAAATACA	226	False	NA	NA	False	AAAAAG	-7	NA	19178635	19103409	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_19103449_19175580_19176245_19176420_19176495_19176577_19176694_19176845_19176951_19177119_19177205_19177726_19177866_19177941_19178042_19178132_19178241_19178579
H1_mix_00060131	chr22	-	2101	10	FSM	ENSG00000100056.12	ENST00000472073.1	2101	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	40.3129731286237	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAACTGTCATTAAAGAACA	5758	False	NA	-37	True	NA	NA	NA	19144633	19133967	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19134476_19135059_19135176_19137322_19137433_19138214_19138318_19139158_19139293_19139611_19139730_19139854_19140025_19142537_19142634_19142725_19142895_19144056
H1_mix_00060133	chr22	-	2484	3	FSM	ENSG00000063515.3	ENST00000086933.3	2625	3	127	14	127	-14	multi-exon	FALSE	canonical	1	1	junction_2	2.5	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAATCTCTCCAGCTCTA	226	False	NA	-19	True	AATAAA	-11	NA	19150165	19147006	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19149096_19149662_19149917_19150024
H1_mix_00060134	chr22	-	1615	8	FSM	ENSG00000100075.10	ENST00000470922.5	1598	8	0	-17	0	0	multi-exon	FALSE	canonical	3	1471	junction_7	165.952538088332	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTGTTGCAGCCTCCTG	-3	True	NA	-27	True	AATAAA	-4	NA	19178739	19175592	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19176245_19176420_19176495_19176577_19176694_19176845_19176951_19177119_19177205_19177726_19178042_19178132_19178241_19178579
H1_mix_00060137	chr22	-	4634	3	FSM	ENSG00000070371.16	ENST00000412649.5	4635	3	0	1	0	-1	multi-exon	FALSE	canonical	3	54	junction_2	2	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGGTGCTCTGCTTGGTG	NA	False	NA	-1	True	ATTAAA	-16	NA	19184831	19179476	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19179970_19180198_19180239_19180730
H1_mix_00060138	chr22	-	5309	32	FSM	ENSG00000070371.16	ENST00000621271.4	5313	32	0	4	0	-1	multi-exon	FALSE	canonical	3	9	junction_4	10.5921455988434	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGGTGCTCTGCTTGGTG	26	True	NA	-1	True	ATTAAA	-16	NA	19291685	19179476	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19179970_19180198_19180239_19180730_19180807_19183389_19183612_19187980_19188092_19191303_19191436_19196265_19196416_19196488_19196657_19199733_19199842_19201328_19201494_19208153_19208312_19208921_19209115_19210325_19210510_19216110_19216257_19219884_19220008_19221376_19221612_19221950_19222094_19222683_19222810_19223890_19224055_19225452_19225634_19226218_19226384_19229837_19229976_19232475_19232599_19233165_19233319_19233421_19233623_19234508_19234707_19235695_19235870_19239274_19239389_19242774_19242937_19253958_19254228_19275622_19275831_19291599
H1_mix_00060140	chr22	-	914	10	NIC	ENSG00000070010.19	novel	1791	12	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	56	junction_9	283.967525529867	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGGCTTTTAGTTACTG	-10	True	NA	-6	True	AATAAA	-16	NA	19479193	19450621	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_19450745_19454748_19454831_19455679_19455769_19456586_19456635_19456852_19456919_19458070_19458140_19465201_19465275_19467872_19468004_19471686_19471809_19479082
H1_mix_00060141	chr22	-	699	7	FSM	ENSG00000070010.19	ENST00000447868.5	596	7	-103	0	-103	0	multi-exon	FALSE	canonical	3	62	junction_6	338.454165615113	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGGTCTGTCCTGGCTCTC	NA	False	NA	NA	False	ATTAAA	-3	NA	19479305	19455679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19455769_19456586_19456635_19456852_19456919_19458070_19458140_19465201_19465275_19467872_19468004_19479082
H1_mix_00060142	chr22	-	625	6	FSM	ENSG00000070010.19	ENST00000484101.5	751	6	126	0	-26	0	multi-exon	FALSE	canonical	2	6	junction_5	350.890068255002	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCCCAGTTCATGCAGG	19	True	NA	NA	False	AATGAA	-4	NA	19478957	19465201	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19465275_19467872_19468004_19471686_19471809_19475067_19475101_19475469_19475603_19478824
H1_mix_00060143	chr22	-	994	5	FSM	ENSG00000070010.19	ENST00000489406.1	994	5	0	0	0	0	multi-exon	FALSE	canonical	3	827	junction_4	20.1246117974981	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAAAGGTATCAGGTTCT	-4	True	NA	NA	False	NA	NA	NA	19479187	19467402	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19468004_19471686_19471809_19475067_19475101_19475469_19475603_19479082
H1_mix_00060144	chr22	-	6657	3	FSM	ENSG00000215012.9	ENST00000328554.9	6653	3	0	-4	0	-4	multi-exon	FALSE	canonical	3	53	junction_1	3.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGTTTGGGGCTTGTGTT	7	True	NA	-3	True	AATAAA	-20	NA	19854874	19846141	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19852487_19854442_19854540_19854659
H1_mix_00060145	chr22	-	6789	2	FSM	ENSG00000215012.9	ENST00000405640.1	6785	2	0	-4	0	-4	multi-exon	FALSE	canonical	3	53	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGTTTGGGGCTTGTGTT	-5	True	NA	-3	True	AATAAA	-20	NA	19854886	19846141	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19852487_19854442
H1_mix_00060148	chr22	-	1910	12	FSM	ENSG00000184470.21	ENST00000334363.14	1893	12	0	-17	0	17	multi-exon	FALSE	canonical	1	1	junction_1	7.35296645596043	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACTGTGTGTCTCTATGG	11	True	NA	NA	False	ATTAAA	-32	NA	19941804	19894240	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19895201_19895406_19895582_19898038_19898131_19899048_19899069_19911376_19911448_19915213_19915277_19915764_19915844_19918142_19918218_19918859_19919005_19919542_19919600_19931029_19931099_19941700
H1_mix_00060149	chr22	-	2549	12	FSM	ENSG00000099889.14	ENST00000495096.5	2549	12	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	60.233430216969	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTTGCTTTCTGCCAC	7800	False	NA	-33	True	ATTAAA	-11	NA	19979416	19969897	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19970744_19971885_19971972_19972357_19972412_19972736_19972828_19972924_19973037_19973118_19973318_19973642_19973794_19974111_19974240_19975685_19975758_19977414_19977587_19977957_19978076_19978896
H1_mix_00060150	chr22	-	4605	16	NIC	ENSG00000099889.14	novel	4056	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	102	junction_15	35.0893462780688	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTTGCTTTCTGCCAC	-8	True	NA	-33	True	ATTAAA	-11	NA	19987190	19969897	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_19970744_19971215_19971336_19971885_19971972_19972357_19972412_19972736_19972828_19972924_19973037_19973118_19973318_19973642_19973794_19974111_19974240_19975685_19975758_19977414_19977587_19977957_19978076_19978896_19979081_19979742_19981738_19981932_19982092_19987072
H1_mix_00060151	chr22	-	2682	16	FSM	ENSG00000099889.14	ENST00000406522.5	2682	16	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_15	35.753228292468	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCATGCCTGGTACGTTC	8359	False	NA	NA	False	NA	NA	NA	19987093	19971227	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19971336_19971885_19971972_19972357_19972412_19972736_19972828_19972924_19973037_19973118_19973318_19973642_19973794_19974111_19974240_19975685_19975758_19977414_19977587_19977957_19978076_19978896_19979081_19979742_19980243_19981210_19981738_19981932_19982092_19987072
H1_mix_00060152	chr22	-	2871	16	FSM	ENSG00000099889.14	ENST00000406259.1	2871	16	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_15	42.8685847160313	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCATGCCTGGTACGTTC	4658	False	NA	NA	False	NA	NA	NA	19990794	19971227	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19971336_19971885_19971972_19972357_19972412_19972736_19972828_19972924_19973037_19973118_19973318_19973642_19973794_19974111_19974240_19975685_19975758_19977414_19977587_19977957_19978076_19978896_19979081_19979742_19980243_19981210_19981738_19981932_19982092_19990584
H1_mix_00060153	chr22	-	2108	3	FSM	ENSG00000099889.14	ENST00000473551.5	2108	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	65	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCAGCATCTGTGCTTTG	4660	False	NA	NA	False	NA	NA	NA	19990792	19979996	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19981738_19981932_19982092_19990584
H1_mix_00060154	chr22	-	1407	3	FSM	ENSG00000099899.15_ENSG00000243762.1	ENST00000487378.1	654	3	-129	-624	0	0	multi-exon	FALSE	canonical	3	191	junction_2	12.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGGACAGTTTGCTTT	8799	False	NA	-10	True	AATAAA	-15	NA	20113507	20111874	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_20112795_20112910_20113008_20113117
H1_mix_00060155	chr22	-	762	2	FSM	ENSG00000099899.15	ENST00000480339.1	762	2	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGTTTCTGTGATGAGAG	9128	False	NA	NA	False	AATAAA	-16	NA	20113178	20112300	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_20112795_20112910
H1_mix_00060156	chr22	-	848	5	FSM	ENSG00000099899.15	ENST00000471040.5	848	5	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	17.0953209972788	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGAGCTATGCCCAGAGGCT	6867	False	NA	NA	False	NA	NA	NA	20115439	20113485	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_20113508_20113685_20113809_20114573_20114686_20114760_20114877_20114964
H1_mix_00060162	chr22	-	3248	11	FSM	ENSG00000244486.9	ENST00000623402.1	3248	11	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_3	17.3046236595888	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTTCCCTTCCCTGGCGC	-9	True	NA	NA	False	GGGGCT	-13	NA	20437826	20424814	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_20426283_20427397_20427551_20429224_20429356_20429535_20429654_20429729_20429834_20430428_20430558_20430689_20430909_20431017_20431538_20431744_20431847_20431929_20431989_20437581
H1_mix_00060163	chr22	-	2552	6	ISM	ENSG00000099910.17	ENST00000328879.9	2528	7	6491	0	2253	0	3prime_fragment	FALSE	canonical	3	20	junction_4	6.74091981854109	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTAGCCACAGCCTCA	6554	False	NA	-7	True	AATAAA	-27	NA	20489304	20441518	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_-_20442439_20446442_20446677_20457807_20458001_20464857_20465577_20471349_20471516_20488984
H1_mix_00060164	chr22	-	3026	23	FSM	ENSG00000241973.11	ENST00000477245.5	3026	23	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_4	50.4497335952799	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTGGAATCTGTGAG	NA	False	NA	-12	True	AATAAA	-14	NA	20734667	20707702	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_20708099_20709295_20709380_20709907_20709998_20710698_20710859_20711340_20711462_20712485_20712612_20712692_20712798_20713280_20713391_20714457_20714529_20714627_20714701_20717707_20717779_20718692_20718823_20721297_20721419_20726487_20726542_20727229_20727398_20727773_20727865_20729312_20729507_20729631_20729712_20729891_20730012_20732970_20733099_20733735_20733844_20734042_20734195_20734394
H1_mix_00060166	chr22	-	560	2	FSM	ENSG00000241973.11	ENST00000462210.1	560	2	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTCCCCCAAGATGTGCT	140	False	NA	NA	False	NA	NA	NA	20734495	20733735	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_20734195_20734394
H1_mix_00060168	chr22	-	1809	2	FSM	ENSG00000184436.12	ENST00000471073.1	1809	2	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCTGCTGTCTGGCTCAG	-24	True	NA	-1	True	AATAAA	-17	NA	21001795	20999772	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21000433_21000646
H1_mix_00060171	chr22	-	1192	1	FSM	ENSG00000224688.1	ENST00000420708.1	748	1	-151	-293	-151	293	mono-exon	FALSE	NA	NA	NA	NA	NA	555	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCTGAAAAGGACAGTTCT	118	False	NA	NA	False	NA	NA	NA	21142522	21141330	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21141300_21142500
H1_mix_00060172	chr22	-	2425	3	FSM	ENSG00000183506.17	ENST00000470274.5	2414	3	0	-11	0	2	multi-exon	FALSE	canonical	3	37	junction_2	75	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGAGGTTTTGTGTCAA	NA	False	NA	NA	False	AATAAA	-26	NA	21477143	21472997	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21473406_21474596_21474681_21475210
H1_mix_00060173	chr22	-	2108	16	NIC	ENSG00000183506.17	novel	2294	17	NA	NA	3	2	combination_of_known_splicesites	FALSE	canonical	3	6	junction_3	63.792859231178	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGAGGTTTTGTGTCAA	NA	False	NA	NA	False	AATAAA	-26	NA	21517517	21472997	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_21473406_21474596_21474681_21475210_21475301_21477789_21477916_21477996_21478102_21478584_21478695_21479758_21479830_21479929_21480003_21483019_21483091_21484004_21484135_21486799_21486928_21487564_21487673_21487871_21488024_21488223_21488382_21491993_21492095_21517324
H1_mix_00060174	chr22	-	4587	15	FSM	ENSG00000183506.17	ENST00000462560.6	2553	15	-2034	0	195	0	multi-exon	FALSE	canonical	3	27	junction_10	67.0063962831694	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCAAAATAGTGCTGTGT	NA	False	NA	NA	False	AATAAA	-1	NA	21490416	21473022	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21473406_21474596_21474681_21475210_21475301_21476001_21476765_21477789_21477916_21477996_21478102_21478584_21478695_21479758_21479830_21479929_21480003_21483019_21483091_21484004_21484135_21486799_21486928_21487564_21487673_21487871_21488024_21488223
H1_mix_00060175	chr22	-	2431	18	NIC	ENSG00000183506.17	novel	2294	17	NA	NA	14	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	74.5944050148238	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCCAAAATAGTGCTGT	NA	False	NA	NA	False	TATAAA	-36	NA	21517467	21473024	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_21473406_21474596_21474801_21475210_21475301_21476001_21476161_21476643_21476765_21477789_21477916_21477996_21478102_21478584_21478695_21479758_21479830_21479929_21480003_21483019_21483091_21484004_21484135_21486799_21486928_21487564_21487673_21487871_21488024_21488223_21488382_21491993_21492095_21517324
H1_mix_00060179	chr22	-	1580	4	NIC	ENSG00000161179.14	novel	1410	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	106	junction_2	58.7329171381395	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTGGTTTATCAGCTG	19	True	NA	0	True	AATAAA	-20	NA	21630012	21628088	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_21629188_21629307_21629408_21629542_21629762_21629850
H1_mix_00060180	chr22	-	1613	3	FSM	ENSG00000161179.14	ENST00000464015.5	1613	3	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_2	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTGGTTTATCAGCTG	19	True	NA	0	True	AATAAA	-20	NA	21630012	21628088	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21628788_21629009_21629762_21629850
H1_mix_00060181	chr22	-	784	1	FSM	ENSG00000284654.1	ENST00000641242.1	118	1	-350	-316	-350	316	mono-exon	FALSE	NA	NA	NA	NA	NA	534	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGGATCTCAGCCCTCTG	NA	False	NA	NA	False	GGGGCT	-16	NA	21661943	21661159	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21661200_21661900
H1_mix_00060182	chr22	-	287	3	FSM	ENSG00000100034.14	ENST00000484588.1	348	3	0	61	0	-61	multi-exon	FALSE	canonical	2	5	junction_1	71	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGAGGAAAACTCTGTCTC	9433	False	NA	NA	False	NA	NA	NA	21931248	21924936	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21925029_21925568_21925663_21931147
H1_mix_00060185	chr22	-	3063	18	FSM	ENSG00000100038.20	ENST00000457179.5	3061	18	0	-2	0	0	multi-exon	FALSE	canonical	3	97	junction_13	47.5369097172621	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGGCCCCTTTGCTGGT	-13	True	NA	NA	False	ATTAAA	-22	NA	21982790	21957024	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21957596_21958491_21958694_21959131_21959233_21959586_21959737_21960320_21960450_21962428_21962894_21963922_21964029_21964160_21964316_21965284_21965376_21967602_21967717_21968618_21968776_21970209_21970407_21970979_21971062_21971876_21971952_21972611_21972719_21974356_21974489_21975639_21975808_21982729
H1_mix_00060186	chr22	-	4169	17	FSM	ENSG00000100038.20	ENST00000444502.5	4163	17	0	-6	0	0	multi-exon	FALSE	canonical	3	97	junction_12	48.2920396519965	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGGCCCCTTTGCTGGT	-13	True	NA	NA	False	ATTAAA	-22	NA	21982790	21957024	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_21958694_21959131_21959737_21960320_21960450_21962428_21962603_21962746_21962894_21963922_21964029_21964160_21964316_21965284_21965376_21967602_21967717_21968618_21968776_21970209_21970407_21970979_21971062_21971876_21971952_21972611_21972719_21974356_21974489_21975639_21975808_21982729
H1_mix_00060187	chr22	-	3797	18	NIC	ENSG00000100038.20	novel	4163	17	NA	NA	2	0	intron_retention	FALSE	canonical	3	97	junction_13	46.9907596011096	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGAGCTGGGGCCCCTTT	-1	True	NA	NA	False	ATTAAA	-16	NA	21982778	21957030	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_21958694_21959131_21959233_21959586_21959737_21960320_21960450_21962428_21962603_21962746_21962894_21963922_21964029_21964160_21964316_21965284_21965376_21967602_21967717_21968618_21968776_21970209_21970407_21970979_21971062_21971876_21971952_21972611_21972719_21974356_21974489_21975639_21975808_21982729
H1_mix_00060188	chr22	-	2984	18	NIC	ENSG00000100038.20	novel	2834	18	NA	NA	-52	-48	combination_of_known_junctions	FALSE	canonical	3	15	junction_7	61.0405163533059	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAGACACCTCATGGCAC	NA	False	NA	NA	False	NA	NA	NA	21982865	21957079	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_21957596_21958491_21958694_21959131_21959233_21959586_21959737_21960320_21960450_21962428_21962603_21962746_21963021_21963922_21964029_21964160_21964316_21965284_21965376_21967602_21967717_21968618_21968776_21970209_21970407_21971876_21971952_21972611_21972719_21974356_21974489_21975639_21975808_21982729
H1_mix_00060192	chr22	-	576	3	Antisense	novelGene_ENSG00000234630.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	31	junction_1	2.5	147	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCAGGTGGCTGCAGCCAG	8870	False	NA	NA	False	NA	NA	NA	22297935	22294779	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr22_-_22294931_22295794_22295966_22297681
H1_mix_00060193	chr22	-	1084	2	Antisense	novelGene_ENSG00000254073.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	48	junction_1	0	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCGAGACTCCTGCTCAA	7140	False	NA	NA	False	NA	NA	NA	22402967	22320130	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr22_-_22321038_22402790
H1_mix_00060194	chr22	-	2146	2	FSM	ENSG00000169548.3	ENST00000302097.3	2148	2	0	2	0	-2	multi-exon	FALSE	canonical	3	6	junction_1	0	267	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTTGTCTTTGGCTT	0	True	NA	NA	False	AATAAA	-13	NA	22520270	22513737	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_22515702_22520088
H1_mix_00060195	chr22	-	393	3	FSM	ENSG00000185686.18	ENST00000403441.1	567	3	174	0	12	0	multi-exon	FALSE	canonical	0	0	junction_2	1	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGGGACAACATCTTCAC	1688	False	NA	NA	False	NA	NA	NA	22557580	22550851	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_22551090_22556811_22556931_22557544
H1_mix_00060196	chr22	-	911	4	FSM	ENSG00000228315.12	ENST00000430357.4	696	4	-204	-11	-204	11	multi-exon	FALSE	canonical	3	4	junction_2	5.35412613473634	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCATTTCTTATCTCTC	NA	False	NA	12	True	AATAAA	-31	NA	23653090	23638475	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_23638943_23640307_23640424_23652478_23652577_23652860
H1_mix_00060197	chr22	-	3225	11	NIC	ENSG00000228315.12	novel	3350	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	11	junction_4	11.5710846509737	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTCCCTCTCTTCATT	-1	True	NA	1	True	AATAAA	-20	NA	23717347	23638486	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_23638943_23659864_23660001_23683724_23683868_23690231_23690357_23694118_23695518_23705428_23705542_23709129_23709242_23709785_23709868_23714186_23714343_23715008_23715195_23717030
H1_mix_00060198	chr22	-	1102	3	NIC	ENSG00000228315.12	novel	696	4	NA	NA	-715	-193	intron_retention	FALSE	canonical	2	5	junction_1	6	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGCAAGAAGGGAGCACC	NA	False	NA	NA	False	NA	NA	NA	23653601	23638679	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_23638943_23652478_23652577_23652860
H1_mix_00060200	chr22	-	223	3	FSM	ENSG00000272578.5	ENST00000458554.5	438	3	0	215	0	-215	multi-exon	FALSE	canonical	0	0	junction_2	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCAGGCCGGTGGTGAA	NA	False	NA	NA	False	NA	NA	NA	23690297	23678824	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_23678843_23683724_23683868_23690235
H1_mix_00060201	chr22	-	565	2	FSM	ENSG00000128218.8	ENST00000248948.4	567	2	0	2	0	-2	multi-exon	FALSE	canonical	1	1	junction_1	0	2931	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTATTGTGAGGGTCATA	-22	True	NA	-19	True	NA	NA	NA	23754425	23752744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_23753199_23754314
H1_mix_00060202	chr22	-	384	3	FSM	ENSG00000250479.9	ENST00000520222.1	384	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	303.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTGTGTGCCTCTCTC	73	False	NA	-3	True	ATTAAA	-19	NA	23767876	23765833	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_23766027_23766127_23766276_23767833
H1_mix_00060203	chr22	-	3464	5	FSM	ENSG00000099958.15	ENST00000290730.11	3525	5	61	0	-55	0	multi-exon	FALSE	canonical	3	7	junction_2	51.9470884650911	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGACCTGTTGCCTTTTAT	5296	False	NA	-5	True	AAGAAA	-29	NA	23839067	23834502	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_23837155_23837658_23837732_23838137_23838446_23838563_23838638_23838710
H1_mix_00060205	chr22	-	1190	5	NNC	ENSG00000133433.11	novel	1108	5	NA	NA	552	-14	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	14.8070928949608	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTGAATAGAGAACCAAGA	10000	False	NA	NA	False	AATAAA	-12	NA	23960601	23957427	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_23957933_23958284_23958459_23958550_23958702_23958911_23958964_23960293
H1_mix_00060206	chr22	-	460	3	FSM	ENSG00000099977.15	ENST00000403754.7	569	3	-26	135	6	-135	multi-exon	FALSE	canonical	3	9	junction_1	303.5	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTTGGAAATGAACCATC	5449	False	NA	NA	False	NA	NA	NA	23974485	23973238	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_23973344_23973767_23973944_23974306
H1_mix_00060207	chr22	-	355	2	FSM	ENSG00000099977.15	ENST00000444947.2	1048	2	6	687	6	-664	multi-exon	FALSE	canonical	3	616	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCGTAGGGGTAGTAGGGG	5449	False	NA	NA	False	NA	NA	NA	23974485	23973767	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_23973944_23974306
H1_mix_00060208	chr22	-	3481	6	FSM	ENSG00000138867.17	ENST00000407471.7	3482	6	1	0	1	0	multi-exon	FALSE	canonical	3	8	junction_1	80.7326451938743	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTAGCCCCTGGCTGG	-39	True	NA	-7	True	AATAAA	-20	NA	24555181	24540437	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_24543101_24543841_24544084_24546913_24547006_24547907_24548074_24548916_24549002_24554948
H1_mix_00060210	chr22	-	1302	5	NNC	ENSG00000178026.13	novel	1828	5	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	56.0418370505464	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTGCTTTTCTGCATCA	34	False	NA	-22	True	AATAAA	-12	NA	24593034	24585636	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_24586412_24588213_24588330_24589155_24589266_24589820_24589950_24592862
H1_mix_00060212	chr22	-	3603	4	FSM	ENSG00000100068.14	ENST00000467672.5	3605	4	0	2	0	-2	multi-exon	FALSE	canonical	3	14	junction_1	6.48074069840786	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGACGGCTTTTGTGAAAT	NA	False	NA	NA	False	AATAGA	-31	NA	25362557	25351419	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_25351903_25354595_25354813_25357254_25357427_25359826
H1_mix_00060213	chr22	-	986	4	FSM	ENSG00000100099.21	ENST00000493455.6	986	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	66.6983258160703	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGGCAACAGAACTCCAAA	2032	False	NA	NA	False	AATAAA	-17	NA	26464192	26444226	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_26444695_26457858_26457968_26458444_26458578_26463916
H1_mix_00060216	chr22	-	2972	14	FSM	ENSG00000100109.17	ENST00000407431.5	2974	14	2	0	2	0	multi-exon	FALSE	canonical	3	118	junction_10	17.6051364210098	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTAACTTCTTTACTCAGG	94	False	NA	-1	True	AATAAA	-26	NA	26512375	26491926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_26492369_26494138_26494305_26494796_26494940_26496072_26496317_26496720_26496890_26498868_26498976_26499103_26499632_26501899_26502053_26503665_26503794_26506302_26506460_26506774_26506929_26510063_26510282_26510616_26510703_26512098
H1_mix_00060219	chr22	-	586	2	FSM	ENSG00000128294.16	ENST00000442495.5	586	2	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_1	0	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGTGATTGCCAAGCACG	-14	True	NA	NA	False	NA	NA	NA	26590125	26541205	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_26541719_26590052
H1_mix_00060220	chr22	-	1023	6	NNC	ENSG00000100122.7	novel	1041	6	NA	NA	1216	-3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	8.67179335547152	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTCTGCCTGTTATGT	7183	False	NA	-4	True	AATAAA	-19	NA	26616811	26599280	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_26599674_26601878_26602022_26607888_26608022_26612071_26612191_26616139_26616339_26616775
H1_mix_00060221	chr22	-	581	1	FSM	ENSG00000226912.1	ENST00000425548.1	448	1	85	-218	85	218	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCAGATGCTGTTACCTC	2913	False	NA	NA	False	NA	NA	NA	26645251	26644670	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_26644700_26645300
H1_mix_00060222	chr22	-	2939	13	NNC	ENSG00000180957.19	novel	2914	12	NA	NA	0	80449	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	291.085897975151	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAGGGAAAAAACCCCACC	-9	True	NA	NA	False	NA	NA	NA	27919255	27771219	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_27771247_27851669_27853664_27854853_27854940_27858386_27858510_27860130_27860242_27873737_27873816_27894554_27894639_27896551_27896627_27897129_27897138_27897800_27897893_27910963_27911110_27914316_27914348_27919171
H1_mix_00060225	chr22	-	1510	14	FSM	ENSG00000183765.23	ENST00000425190.7	1510	14	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_13	157.142343040733	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTGCTTCTGCTTGAT	10	True	NA	-2	True	ATTAAA	-18	NA	28741811	28687742	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28724976_28725125_28725242_28725368_28741768
H1_mix_00060226	chr22	-	1771	14	FSM	ENSG00000183765.23	ENST00000348295.7	1771	14	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	161.571791433351	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTGCTTCTGCTTGAT	-13	True	NA	-2	True	ATTAAA	-18	NA	28741834	28687742	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28724976_28725125_28725242_28725368_28734402_28734728_28741768
H1_mix_00060227	chr22	-	1532	14	FSM	ENSG00000183765.23	ENST00000448511.5	1532	14	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_11	209.034721500758	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGAACACGAAAGAAATGTA	7686	False	NA	-68	True	NA	NA	NA	28734721	28687886	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28724885_28724924_28725242_28725368_28734402
H1_mix_00060230	chr22	-	1690	5	FSM	ENSG00000100219.17	ENST00000405219.7	1690	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	716.398108596052	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACCCATGCAATTAAAAGG	463	False	NA	35	True	TTTAAA	-2	NA	28800133	28794588	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_28795733_28796046_28796193_28797076_28797206_28799056_28799154_28799959
H1_mix_00060231	chr22	-	1055	4	Intergenic	novelGene_856	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_2	4.78423336480244	28	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTAGACTCTTTGTTC	15	True	NA	-59	True	NA	NA	NA	29205807	29180317	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_-_29180664_29183171_29183382_29205159_29205322_29205470
H1_mix_00060232	chr22	-	1753	7	NNC	ENSG00000100263.14	novel	1777	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	206.583047599641	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGACCTCCTTGGAGGCA	16	False	NA	-26	True	AATAAA	-19	NA	29267960	29259871	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_29260238_29260325_29260614_29260701_29260865_29263834_29264219_29265478_29265669_29267425_29267575_29267747
H1_mix_00060236	chr22	-	999	3	FSM	ENSG00000100263.14	ENST00000493894.1	999	3	0	0	0	0	multi-exon	FALSE	canonical	3	533	junction_2	43	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCGAGGCGGGCGGATCA	16	False	NA	NA	False	NA	NA	NA	29267960	29265034	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_29265669_29267425_29267578_29267747
H1_mix_00060238	chr22	-	3560	4	FSM	ENSG00000100280.17	ENST00000482818.1	3560	4	0	0	0	0	multi-exon	FALSE	canonical	3	437	junction_1	31.2729915422238	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTCCCCAGCCAGTGTG	9178	False	NA	2	True	AATAAA	-15	NA	29332321	29327679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_29330533_29330622_29330710_29331448_29331534_29331786
H1_mix_00060239	chr22	-	4165	23	FSM	ENSG00000100280.17	ENST00000357586.7	4165	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	172.246729868562	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTCCCCAGCCAGTGTG	-12	True	NA	2	True	AATAAA	-15	NA	29388570	29327679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_29328896_29329711_29329721_29330377_29330533_29330622_29330710_29331448_29331534_29331786_29331917_29334264_29334411_29338989_29339134_29339753_29339775_29340655_29340858_29341500_29341761_29342284_29342384_29349217_29349384_29350034_29350151_29351170_29351267_29351704_29351826_29354649_29354872_29356425_29356617_29358725_29358972_29359823_29359960_29363000_29363107_29367206_29367271_29388423
H1_mix_00060243	chr22	-	1002	8	FSM	ENSG00000184117.12	ENST00000415100.5	661	8	0	-341	0	-21	multi-exon	FALSE	canonical	3	21	junction_6	959.622948913599	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCGGGCCATCAAGTACC	245	False	NA	NA	False	NA	NA	NA	29581074	29560828	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_29561203_29561505_29561647_29561791_29561863_29569192_29569288_29570161_29570208_29570404_29570533_29580098_29580156_29580984
H1_mix_00060247	chr22	-	2880	22	NIC	ENSG00000100325.15	novel	2823	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_19	101.228463457957	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATCTGTGTATGTCCATGA	30	False	NA	-21	True	AATAAA	-19	NA	29838228	29788610	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_29789185_29790468_29790549_29792432_29792536_29793359_29793491_29793576_29793677_29800990_29801111_29801993_29802209_29804637_29804831_29806215_29806291_29806484_29806554_29806796_29806905_29808110_29808186_29813429_29813543_29814656_29814768_29816005_29816074_29822334_29822465_29825086_29825258_29825621_29825781_29832244_29832343_29833540_29833615_29834488_29834551_29838177
H1_mix_00060250	chr22	-	51137	1	FSM	ENSG00000279159.1	ENST00000624945.1	49287	1	-2134	284	-2134	-284	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTGAGCCACCGCGCCTG	NA	False	NA	NA	False	NA	NA	NA	30030370	29979233	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_29979200_30030400
H1_mix_00060251	chr22	-	409	3	FSM	ENSG00000227117.6	ENST00000453743.6	580	3	171	0	-79	0	multi-exon	FALSE	canonical	1	1	junction_1	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTGGGACTACAGGTATG	NA	False	NA	NA	False	NA	NA	NA	30080309	30018631	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_30018730_30050460_30050590_30080127
H1_mix_00060252	chr22	-	3869	3	FSM	ENSG00000128342.5	ENST00000249075.4	3871	3	0	2	0	-2	multi-exon	FALSE	canonical	2	4	junction_2	1.5	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGCTCTCCGGAGTGT	-2	True	NA	NA	False	AATAAA	-12	NA	30246759	30240454	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_30244062_30244754_30244934_30246676
H1_mix_00060253	chr22	-	1811	13	FSM	ENSG00000248751.6	ENST00000434987.5	1811	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	43.265572020051	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCCTGGCCAGGTGAGT	201	False	NA	NA	False	NA	NA	NA	30299476	30285237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_30285689_30285831_30285927_30286015_30286099_30286824_30286949_30287154_30287288_30287372_30287561_30288705_30288777_30293650_30293806_30293920_30294111_30294795_30294862_30294940_30295056_30295736_30295844_30299443
H1_mix_00060259	chr22	-	6784	1	FSM	ENSG00000099999.15	ENST00000619645.1	555	1	-1355	-4874	-1355	-639	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGCAGCAGCAGGAGCCT	2645	False	NA	NA	False	NA	NA	NA	30376233	30369449	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_30369400_30376200
H1_mix_00060260	chr22	-	2834	10	NNC	ENSG00000099999.15	novel	2011	9	NA	NA	7	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	8.43859446491001	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCACATCACTGTTGGGC	-8	True	NA	NA	False	NA	NA	NA	30387404	30374318	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_30375008_30378679_30379623_30379710_30379814_30380061_30380206_30380281_30380402_30384338_30384496_30385903_30385990_30386069_30386142_30386615_30386760_30387028
H1_mix_00060261	chr22	-	788	4	ISM	ENSG00000214491.9	ENST00000691669.1	3295	8	4841	1836	3478	-921	3prime_fragment	FALSE	canonical	2	2	junction_3	2.05480466765633	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCACTTTGGGAAGCCAAG	NA	False	NA	NA	False	AATATA	-38	NA	30529163	30524645	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_-_30525110_30525610_30525751_30525825_30525933_30529086
H1_mix_00060262	chr22	-	1004	4	FSM	ENSG00000100029.18	ENST00000441668.5	999	4	0	-5	0	0	multi-exon	FALSE	canonical	3	102	junction_2	263.219806752202	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTCCATGAGCCTTC	NA	False	NA	-1	True	ATTAAA	-26	NA	30579923	30576624	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_30577130_30578836_30578996_30579136_30579304_30579750
H1_mix_00060265	chr22	-	586	3	NNC	ENSG00000100029.18	novel	630	3	NA	NA	25	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.5	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCATGAAGATGGCATGA	13	False	NA	NA	False	AATAAA	-5	NA	30607033	30603794	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_30604103_30605460_30605514_30606808
H1_mix_00060266	chr22	-	766	5	FSM	ENSG00000133422.14	ENST00000445980.5	766	5	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	116.381645889719	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTGTGCCTGTGAGACC	7948	False	NA	-22	True	TATAAA	-20	NA	30932894	30926610	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_30926872_30928027_30928208_30932358_30932453_30932544_30932770_30932888
H1_mix_00060270	chr22	-	2997	3	FSM	ENSG00000100100.13	ENST00000480654.5	3030	3	8	25	8	-6	multi-exon	FALSE	canonical	3	14	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAATTAAAAAAAAAAAAAG	5	True	NA	-25	True	NA	NA	NA	31290746	31281618	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_31283289_31289314_31289394_31289498
H1_mix_00060271	chr22	-	2294	5	FSM	ENSG00000100100.13	ENST00000441972.5	2374	5	74	6	19	-6	multi-exon	FALSE	canonical	1	1	junction_1	5.33853912601566	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAATTAAAAAAAAAAAAAG	9	True	NA	-25	True	NA	NA	NA	31292460	31281618	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_31283289_31289498_31289700_31290964_31291085_31291179_31291297_31292274
H1_mix_00060272	chr22	-	770	2	FSM	ENSG00000100105.18	ENST00000494109.1	835	2	65	0	65	0	multi-exon	FALSE	canonical	3	261	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCTACTCAGATGGCAGG	3353	False	NA	NA	False	AAAACA	-43	NA	31343220	31335417	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_31335864_31342896
H1_mix_00060273	chr22	-	1983	9	FSM	ENSG00000184708.18	ENST00000495101.5	2864	9	900	-19	-870	13	multi-exon	FALSE	canonical	3	38	junction_6	35.4345788037617	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCTCTCTGAAACCCTT	5600	False	NA	36	True	AATGAA	-22	NA	31450360	31439345	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_31440122_31440703_31440869_31441773_31442119_31442961_31443095_31444605_31444691_31447425_31447569_31448152_31448233_31449347_31449532_31450288
H1_mix_00060274	chr22	-	3597	19	FSM	ENSG00000184708.18	ENST00000397525.5	3695	19	119	-21	119	13	multi-exon	FALSE	canonical	1	1	junction_18	44.6965074449646	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCTCTCTGAAACCCTT	6939	False	NA	36	True	AATGAA	-22	NA	31489468	31439345	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_31440122_31440703_31440869_31441773_31442119_31442961_31443095_31444605_31444691_31447425_31447566_31448152_31448233_31449347_31449532_31450288_31450361_31454143_31454377_31455135_31455316_31455851_31455988_31458474_31458651_31462931_31463134_31463680_31463968_31468174_31468303_31471843_31471918_31488622_31488746_31489390
H1_mix_00060275	chr22	-	861	7	FSM	ENSG00000184708.18	ENST00000445424.5	861	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	60.1387285088957	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCATCTTCCAAGTTTGC	6577	False	NA	NA	False	NA	NA	NA	31449383	31441802	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_31442119_31442961_31443095_31444605_31444691_31446937_31447009_31447425_31447566_31448152_31448233_31449347
H1_mix_00060276	chr22	-	542	2	FSM	ENSG00000184708.18	ENST00000475437.1	542	2	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTCGTGTTCCACCCCA	NA	False	NA	NA	False	NA	NA	NA	31443419	31442034	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_31442119_31442961
H1_mix_00060278	chr22	-	2534	7	FSM	ENSG00000241878.12	ENST00000460723.5	2534	7	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_5	19.192012227313	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTCTGTTCCTGGAGG	10	True	NA	-1	True	AATAAA	-18	NA	31662215	31618490	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_31619837_31620552_31620714_31620995_31621143_31621333_31621886_31648100_31648277_31650698_31650779_31662143
H1_mix_00060279	chr22	-	2284	7	FSM	ENSG00000241878.12	ENST00000437808.5	2264	7	0	-20	0	0	multi-exon	FALSE	canonical	2	3	junction_6	150.516241279434	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTCTGTTCCTGGAGG	4	True	NA	-1	True	AATAAA	-18	NA	31662221	31618490	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_31619837_31620552_31620714_31620995_31621143_31621333_31621473_31621648_31621886_31648100_31648277_31662143
H1_mix_00060281	chr22	-	11493	9	NNC	ENSG00000183530.14	novel	10827	9	NA	NA	-53	3	intron_retention	FALSE	canonical	3	5	junction_8	35.9304884464434	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCAAGGCCGTTACTTTG	NA	False	NA	-5	True	AATAAA	-25	NA	31750193	31681343	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_31685804_31688155_31688228_31701655_31701763_31703549_31703722_31704654_31704727_31712082_31717292_31725537_31725611_31738386_31738912_31749390
H1_mix_00060282	chr22	-	8389	14	NNC	ENSG00000185666.15	novel	7867	14	NA	NA	0	525	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_6	19.4850876070203	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCTTTAGTCCGTTCTAC	-3	True	NA	NA	False	TTTAAA	-1	NA	33058381	32507294	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_32513825_32518042_32518335_32527917_32528006_32528873_32529009_32533792_32533896_32538035_32538111_32541570_32541714_32596673_32596737_32864914_32865005_32868965_32869123_32931389_32931482_32980644_32980703_33006351_33006825_33058291
H1_mix_00060284	chr22	-	1265	7	NNC	ENSG00000185666.15	novel	855	3	NA	NA	12	43104	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	27.0185121722126	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATCAACTCTGGCTATG	9	True	NA	-16	True	AATAAA	-6	NA	33058369	32821470	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_32821791_32864914_32865005_32868965_32869123_32931389_32931482_32980644_32980703_33006351_33006822_33058291
H1_mix_00060285	chr22	-	380	2	FSM	ENSG00000133424.22	ENST00000675031.1	412	2	0	32	0	-32	multi-exon	FALSE	canonical	3	164	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCCCTTTGAGTGCACAA	NA	False	NA	NA	False	ATTAAA	-2	NA	33626328	33604263	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_33604559_33626243
H1_mix_00060286	chr22	-	135	1	FSM	ENSG00000253007.2	ENST00000517198.2	135	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAAGGACATAGCTGGCG	NA	False	NA	NA	False	NA	NA	NA	33704920	33704785	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_33704800_33704900
H1_mix_00060287	chr22	-	549	4	FSM	ENSG00000237316.1	ENST00000440858.1	549	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	2.16024689946929	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATATGTGTGAGTGGTAAT	NA	False	NA	NA	False	NA	NA	NA	34724919	34711907	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_34712104_34712720_34712898_34713861_34713974_34724855
H1_mix_00060288	chr22	-	394	3	Antisense	novelGene_ENSG00000238584.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_2	1	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGATAATTCATCCTTCA	NA	False	NA	-90	True	NA	NA	NA	35253121	35232722	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr22_-_35232892_35250263_35250374_35253006
H1_mix_00060289	chr22	-	6599	13	NNC	ENSG00000100320.23	novel	1254	13	NA	NA	0	28622	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	125.679044483248	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAAGAAAGAAAGACCTA	NA	False	NA	NA	False	NA	NA	NA	35810004	35710113	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_35710141_35738736_35744250_35745922_35745996_35746472_35746562_35756104_35756145_35759887_35760021_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781744_35809779
H1_mix_00060290	chr22	-	7237	15	NNC	ENSG00000100320.23	novel	7224	14	NA	NA	13	28622	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	159.453867040865	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAAGAAAGAAAGACCTA	-8	True	NA	NA	False	NA	NA	NA	36028811	35710113	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_35710141_35738736_35744250_35745922_35745996_35746472_35746562_35756104_35756145_35759887_35760031_35761199_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781747_35809779_35810005_35938846_35938898_36028239
H1_mix_00060296	chr22	-	7566	42	NNC	ENSG00000100345.23	novel	7451	41	NA	NA	-45	39481	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	241.843733500933	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTACATAATGGCAGAATGG	NA	False	NA	NA	False	NA	NA	NA	36388055	36241798	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_36241826_36281279_36282786_36284092_36284266_36284402_36284512_36285120_36285330_36285657_36285782_36285864_36285954_36286717_36286847_36288251_36288414_36288726_36288940_36289084_36289298_36291985_36292235_36293328_36293482_36293758_36293864_36294091_36294299_36294931_36295077_36295504_36295718_36296842_36297015_36298918_36299043_36300126_36300265_36300850_36301058_36301533_36301666_36302567_36302677_36303994_36304156_36305032_36305103_36305929_36306052_36306413_36306608_36309281_36309397_36312048_36312223_36314144_36314319_36316516_36316670_36318206_36318326_36319539_36319636_36320219_36320364_36320797_36320897_36321757_36321822_36322428_36322522_36326567_36326662_36327460_36327489_36341369_36341527_36348903_36349256_36387806
H1_mix_00060300	chr22	-	1761	4	FSM	ENSG00000100348.10	ENST00000403313.5	912	4	-294	-555	0	10	multi-exon	FALSE	canonical	1	3	junction_3	323.463547662896	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTGTGGGCTCAGAGC	-20	True	NA	-4	True	AATAAA	-29	NA	36481634	36467035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_36467918_36476732_36476857_36480574_36480838_36481142
H1_mix_00060302	chr22	-	4636	8	FSM	ENSG00000100350.16	ENST00000685224.1	3554	8	0	-1082	0	0	multi-exon	FALSE	canonical	2	9	junction_5	18.0056680418321	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTTTGAGTGCTATTT	-2	True	NA	-16	True	AGTAAA	-19	NA	36507040	36487189	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_36490268_36493632_36493804_36495966_36496209_36497990_36498157_36501240_36501408_36504514_36504767_36505895_36506424_36507008
H1_mix_00060307	chr22	-	552	5	NNC	ENSG00000100362.13	novel	595	5	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	10.9201648339208	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCTGCTTGCTCAGGAAG	1967	False	NA	-17	True	AATAAA	-15	NA	36817531	36800702	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_36800919_36813645_36813756_36815102_36815236_36816944_36817013_36817506
H1_mix_00060308	chr22	-	1102	3	NIC	ENSG00000128311.14	novel	1125	3	NA	NA	33	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	55.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGTGTGTTTGCCTGCCTC	528	False	NA	-21	True	AATAAA	-16	NA	37019607	37010864	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_37011326_37018137_37018754_37019582
H1_mix_00060309	chr22	-	1650	4	FSM	ENSG00000133466.14	ENST00000397110.6	1647	4	0	-3	0	2	multi-exon	FALSE	canonical	3	15	junction_1	7.93025150224688	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGACTGGTTCTTTCTGC	12	True	NA	1	True	ATTAAA	-23	NA	37188286	37180163	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_37180868_37182151_37182736_37185217_37185456_37188162
H1_mix_00060314	chr22	-	2532	4	ISM	ENSG00000100124.15	ENST00000498417.5	2403	5	33	-1	33	0	intron_retention	FALSE	canonical	3	62	junction_3	14.9740516301441	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTGTGTGGTAATTTAT	1	True	NA	-4	True	AATAAA	-20	NA	37834695	37830854	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_-_37832018_37832636_37832745_37832957_37833207_37833683
H1_mix_00060321	chr22	-	2118	6	NIC	ENSG00000184381.20	novel	2172	15	NA	NA	-336	-8	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	16.2898741554378	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTCAAGTTCACCTGTGT	NA	False	NA	-13	True	AATAAA	-7	NA	38121376	38111507	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_38112306_38112503_38112578_38113486_38113655_38115526_38115850_38116074_38116212_38120758
H1_mix_00060324	chr22	-	3593	9	FSM	ENSG00000198792.13	ENST00000361684.8	3593	9	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_8	136.816882638803	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATGAGATAATATAGATT	367	False	NA	-36	True	AATAAA	-17	NA	38272664	38219323	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38221711_38224784_38224980_38225423_38225594_38226778_38226871_38230668_38230745_38231243_38231335_38245934_38246101_38247769_38248020_38272498
H1_mix_00060330	chr22	-	1521	9	ISM	ENSG00000213923.13	ENST00000403904.5	1580	10	67	781	39	-128	5prime_fragment	FALSE	canonical	3	867	junction_8	118.317105694823	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTCTTCCCTTTCCATCG	-9	True	NA	NA	False	NA	NA	NA	38317372	38294030	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_-_38294249_38294341_38294535_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38317159
H1_mix_00060331	chr22	-	3162	4	FSM	ENSG00000213923.13	ENST00000612795.2	3162	4	0	0	0	0	multi-exon	FALSE	canonical	3	1106	junction_3	40.4310112001501	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCCAAGGACAGAGGTCCA	15	False	NA	-69	True	NA	NA	NA	38302990	38296302	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38298935_38299894_38300066_38300723_38300953_38302860
H1_mix_00060332	chr22	-	787	4	FSM	ENSG00000213923.13	ENST00000442216.1	787	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	509.831998472699	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTGTGCCTCTTTCAT	2980	False	NA	-2	True	ATTAAA	-18	NA	38300025	38297601	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38297999_38298093_38298204_38298785_38298935_38299894
H1_mix_00060337	chr22	-	1524	4	NNC	ENSG00000244627.5	novel	468	3	NA	NA	0	2090	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	67.4108464731175	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGATAAGAAATGCAACCT	1	True	NA	NA	False	AATAAA	-19	NA	38398873	38366807	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_38367788_38380369_38380424_38380936_38380991_38398437
H1_mix_00060338	chr22	-	974	4	FSM	ENSG00000100201.23	ENST00000497196.5	856	4	0	-118	0	118	multi-exon	FALSE	canonical	3	61	junction_2	5.8878405775519	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGCCACTCCAGCCTGGGT	6221	False	NA	NA	False	NA	NA	NA	38495046	38493242	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38493772_38494020_38494132_38494629_38494803_38494885
H1_mix_00060344	chr22	-	3743	5	FSM	ENSG00000100221.11	ENST00000683374.1	3743	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	9.02773504263389	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATTGCCAGCGTAAGTC	-9	True	NA	1	True	AATAAA	-28	NA	38700943	38685542	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_38688002_38688934_38689130_38689295_38689425_38699802_38700619_38700799
H1_mix_00060351	chr22	-	2801	2	FSM	ENSG00000187051.9	ENST00000488602.1	2801	2	0	0	0	0	multi-exon	FALSE	canonical	3	855	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGCTGTGTTTGCTGCTG	980	False	NA	-10	True	AATAAA	-10	NA	39532093	39529096	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_39529624_39529819
H1_mix_00060354	chr22	-	2959	5	FSM	ENSG00000100372.15	ENST00000402844.7	2405	5	-99	-455	-38	-3	multi-exon	FALSE	canonical	3	391	junction_1	12.0830459735946	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAGGAGTCGTATGTCAT	NA	False	NA	-5	True	ATTAAA	-15	NA	40780293	40769632	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_40770982_40773936_40774020_40777039_40777136_40777227_40777374_40779008
H1_mix_00060356	chr22	-	2056	7	FSM	ENSG00000100372.15	ENST00000544408.5	2060	7	2	2	2	-2	multi-exon	FALSE	canonical	3	18	junction_5	147.500282485605	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGGAGTCGTATGTCATC	NA	False	NA	-4	True	ATTAAA	-16	NA	40819397	40769631	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_40770982_40773936_40774020_40777039_40777136_40777227_40777374_40779008_40779126_40799022_40799084_40819194
H1_mix_00060363	chr22	-	1465	6	FSM	ENSG00000100413.17	ENST00000431534.5	1464	6	0	-1	0	0	multi-exon	FALSE	canonical	3	18	junction_3	117.792359684319	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGCTTAAGATCTGAACCA	-7	True	NA	-24	True	AATAAA	-15	NA	41544455	41528841	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_41529337_41530686_41530889_41532093_41532158_41532603_41532746_41540698_41540796_41543990
H1_mix_00060364	chr22	-	1330	5	FSM	ENSG00000100413.17	ENST00000337566.9	1330	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	132.320633311665	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGCTTAAGATCTGAACCA	-14	True	NA	-24	True	AATAAA	-15	NA	41544462	41528841	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_41529337_41530686_41530889_41532093_41532158_41540698_41540796_41543990
H1_mix_00060373	chr22	-	689	4	FSM	ENSG00000100162.15	ENST00000396437.3	689	4	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_1	46.8852025933793	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACACATATACACATACTT	-6	True	NA	-16	True	AATAAA	-22	NA	41947151	41944920	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_41945305_41945912_41946006_41946416_41946497_41947019
H1_mix_00060378	chr22	-	563	2	FSM	ENSG00000229891.3	ENST00000653912.2	566	2	0	3	0	-3	multi-exon	FALSE	canonical	2	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTCTGTTGAGTGTTTG	8966	False	NA	-5	True	AATAAA	-28	NA	42369284	42364389	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_42364726_42369057
H1_mix_00060381	chr22	-	3305	9	NNC	ENSG00000100227.19	novel	3362	9	NA	NA	0	61948	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	233.456098656685	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATGCCTGTAATCCCAGC	1	True	NA	NA	False	AAAAAG	-2	NA	42614883	42521772	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_42521803_42583720_42585969_42587505_42587573_42591954_42592085_42595536_42595615_42596185_42596366_42599697_42599794_42602769_42603161_42614798
H1_mix_00060382	chr22	-	1973	10	NNC	ENSG00000100243.22	novel	3048	10	NA	NA	0	93957	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	522.491419977991	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATGCCTGTAATCCCAGC	-22	True	NA	NA	False	AAAAAG	-2	NA	42649392	42521772	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_42521803_42618812_42619946_42623788_42623889_42627303_42627390_42627604_42627689_42628151_42628282_42630881_42630989_42631377_42631451_42636714_42636847_42649294
H1_mix_00060387	chr22	-	374	2	FSM	ENSG00000128274.17	ENST00000647439.1	407	2	43	-10	0	10	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCATATCTTGTCTATATA	14	True	NA	NA	False	AATAAA	-35	NA	42720819	42718235	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_42718587_42720796
H1_mix_00060398	chr22	-	1212	1	NIC	ENSG00000056487.16	novel	508	4	NA	NA	39	1155	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTCCCAGCCCAGGGCAG	NA	False	NA	NA	False	NA	NA	NA	44969044	44967832	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_44967800_44969000
H1_mix_00060414	chr22	-	1733	5	FSM	ENSG00000128159.12	ENST00000473946.1	1733	5	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	9.23309265630969	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCTTTTTTGCATTAGT	805	False	NA	NA	False	AATAAA	-23	NA	50226191	50222986	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50224257_50224331_50224421_50224510_50224593_50225793_50225944_50226049
H1_mix_00060425	chr22	-	828	10	FSM	ENSG00000205593.12	ENST00000433760.1	920	10	92	0	-33	0	multi-exon	FALSE	canonical	2	2	junction_6	3.5416394334465	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGGTGCTGGCCTTGAC	8083	False	NA	NA	False	NA	NA	NA	50319003	50314821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50314922_50315713_50315770_50316024_50316088_50316173_50316254_50316369_50316476_50316565_50316713_50317292_50317374_50317907_50318021_50318846_50318890_50318964
H1_mix_00060428	chr22	-	7421	42	NIC	ENSG00000100241.22	novel	8019	41	NA	NA	0	-99	intron_retention	FALSE	canonical	2	2	junction_1	70.3326252016608	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTCAGGCAGAAGAGACGC	6	True	NA	-117	True	NA	NA	NA	50475030	50444428	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_50444454_50445617_50447241_50447321_50447454_50447521_50447610_50448232_50448445_50448542_50448651_50454511_50454743_50454813_50454945_50455015_50455143_50455223_50455410_50455480_50455583_50456215_50456396_50456491_50456674_50457033_50457112_50459254_50459393_50459469_50459667_50459951_50460160_50460271_50460409_50460533_50460713_50461158_50461287_50461522_50461719_50461795_50461870_50461946_50462120_50462204_50462474_50462558_50462718_50462869_50462939_50463282_50463433_50464328_50464442_50464533_50464739_50464818_50464918_50465000_50465130_50465214_50465329_50465762_50465841_50465960_50466075_50466149_50466259_50466349_50466483_50466604_50466711_50467337_50467449_50467531_50467691_50467785_50467924_50468375_50468462_50474785
H1_mix_00060429	chr22	-	2139	10	ISM	ENSG00000100241.22	ENST00000692946.1	2082	14	684	2496	-472	0	internal_fragment	FALSE	canonical	3	337	junction_8	40.4761780267643	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGAGAGAACTAACGCCA	8337	False	NA	-29	True	NA	NA	NA	50455989	50446825	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_-_50447241_50447321_50447454_50447521_50447610_50448232_50448445_50448542_50448651_50454511_50454743_50454813_50454945_50455015_50455143_50455223_50455410_50455480
H1_mix_00060432	chr22	-	960	4	FSM	ENSG00000100258.18	ENST00000514938.1	960	4	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	23.5372045918796	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGGGCAGTTACGACGGC	0	True	NA	NA	False	NA	NA	NA	50506220	50504833	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50504985_50505056_50505538_50505673_50505816_50506034
H1_mix_00060437	chr22	-	4156	29	NIC	ENSG00000254413.8	novel	4906	27	NA	NA	141	8	intron_retention	FALSE	canonical	2	14	junction_18	109.862088872498	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTCCCTGGGGCCATTT	0	True	NA	-22	True	AATAAA	-21	NA	50582824	50568860	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_50569082_50569335_50569422_50569575_50569669_50570292_50570407_50570890_50571044_50571157_50571293_50571374_50571540_50572005_50572123_50572202_50572309_50572874_50573061_50573519_50573716_50574334_50574420_50574492_50574601_50576034_50576113_50576197_50576336_50576535_50577035_50577323_50577464_50577774_50577935_50579035_50579256_50579425_50579508_50579726_50579831_50579973_50580083_50580189_50580272_50580357_50580417_50580564_50580661_50581419_50581554_50581748_50581863_50582248_50582358_50582557
H1_mix_00060447	chr22	+	250	1	Intergenic	novelGene_838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGTGGCAAGTCCCGCT	459	False	NA	NA	False	NA	NA	NA	16612098	16612348	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_+_16612100_16612300
H1_mix_00060448	chr22	+	333	1	Intergenic	novelGene_839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGACGGAGAAGCAAGT	7507	False	NA	NA	False	AAAAAG	-26	NA	17367398	17367731	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_+_17367400_17367700
H1_mix_00060449	chr22	+	263	1	Intergenic	novelGene_842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCACTTTTAGAACATGGA	NA	False	NA	NA	False	NA	NA	NA	20695541	20695804	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_+_20695500_20695800
H1_mix_00060450	chr22	+	875	1	Intergenic	novelGene_844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCAGTGAGCTGCGGGCT	NA	False	NA	NA	False	NA	NA	NA	21288231	21289106	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_+_21288200_21289100
H1_mix_00060451	chr22	+	239	1	Intergenic	novelGene_847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGGTCATCCCATCATTA	5997	False	NA	NA	False	NA	NA	NA	24257550	24257789	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_+_24257600_24257800
H1_mix_00060452	chr22	+	256	1	Intergenic	novelGene_849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCAACTGCAGGCTTCCA	NA	False	NA	NA	False	NA	NA	NA	25178421	25178677	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_+_25178400_25178700
H1_mix_00060453	chr22	+	290	1	Intergenic	novelGene_851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTAGCCCGACATCTCCTC	NA	False	NA	NA	False	NA	NA	NA	25179016	25179306	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_+_25179000_25179300
H1_mix_00060454	chr22	+	263	1	Intergenic	novelGene_852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGCGCCCCTCACCTCC	5663	False	NA	NA	False	GGGGCT	-28	NA	26772693	26772956	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_+_26772700_26773000
H1_mix_00060455	chr22	+	3681	1	Antisense	novelGene_ENSG00000289489.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGGGATCAGCCAGGAGG	NA	False	NA	NA	False	NA	NA	NA	27666968	27670649	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr22_+_27667000_27670600
H1_mix_00060456	chr22	+	1866	1	Intergenic	novelGene_854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	291	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACCATTCATGACACCTT	NA	False	NA	NA	False	NA	NA	NA	28909747	28911613	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_+_28909700_28911600
H1_mix_00060457	chr22	+	5717	1	Intergenic	novelGene_858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CTCAAAAAAAAAAAAAAAAA	8421	False	NA	NA	False	NA	NA	NA	29498939	29504656	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_+_29498900_29504700
H1_mix_00060466	chr22	+	1895	3	NNC	ENSG00000284294.1	novel	1382	4	NA	NA	-534	11	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	11	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTATACTTTGTCTCTGTG	1503	False	NA	17	True	NA	NA	NA	18938911	18947752	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_18939750_18945071_18945167_18946790
H1_mix_00060471	chr22	+	3525	9	FSM	ENSG00000183597.16	ENST00000327374.9	3509	9	-16	0	5	0	multi-exon	FALSE	canonical	3	18	junction_1	24.4588302050609	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCACCTTGGGAGGCTGAG	-14	True	NA	NA	False	AAAAAG	-43	NA	20021093	20067164	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_20021247_20036759_20036855_20043354_20043444_20052464_20052585_20053436_20053552_20055942_20056014_20061529_20061684_20063337_20063443_20064541
H1_mix_00060472	chr22	+	1909	7	NIC	ENSG00000183597.16	novel	3509	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	12	junction_5	29.590257405662	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGGAATCTGTACCTGA	10	False	NA	-37	True	NA	NA	NA	20021138	20065862	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_20021247_20036759_20036855_20043354_20043444_20052464_20052585_20055942_20056014_20063337_20063443_20064541
H1_mix_00060479	chr22	+	6924	2	FSM	ENSG00000169635.10	ENST00000443632.2	6940	2	16	0	16	0	multi-exon	FALSE	canonical	3	18	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGTGGGACCTCCAT	7	False	NA	24	True	ATTAAA	-15	NA	21442475	21451463	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_21442858_21444921
H1_mix_00060485	chr22	+	1291	9	ISM	ENSG00000286129.1	ENST00000652112.1	2895	14	16	18583	16	-18583	5prime_fragment	FALSE	canonical	3	63	junction_6	206.367655835405	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTTGTGGGATATTTTG	-8	True	NA	20	True	ATTAAA	-17	NA	22298139	22310539	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_+_22298212_22303223_22303298_22303942_22304115_22306832_22307022_22307105_22307246_22307532_22307592_22308696_22308820_22309735_22309884_22310225
H1_mix_00060500	chr22	+	1249	8	FSM	ENSG00000100031.19	ENST00000466310.5	1249	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	43.176429699926	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGCCTCCCTGGCCTGTC	NA	False	NA	5	True	AATAAA	-24	NA	24620407	24628976	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_24620521_24623106_24623257_24623779_24623917_24627409_24627620_24627851_24627980_24628080_24628194_24628274_24628389_24628692
H1_mix_00060508	chr22	+	1206	4	NIC	ENSG00000100058.13	novel	1389	5	NA	NA	18	-7	combination_of_known_splicesites	FALSE	canonical	3	34	junction_1	83.475878085961	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGTCCGTTTCTCCATTG	2	True	NA	32	True	AATAAA	-7	NA	25448116	25461661	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_25448285_25457258_25457402_25459415_25459516_25460866
H1_mix_00060510	chr22	+	4404	22	NNC	ENSG00000100077.16	novel	9277	21	NA	NA	41	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_21	17.0022007379037	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCGACTTCCGTGTGCTGT	7	True	NA	21	True	AATAAA	-18	NA	25564715	25729294	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_25565154_25604376_25604454_25644591_25644666_25661575_25661678_25663629_25663705_25667738_25667801_25672295_25672348_25674436_25674529_25678815_25678916_25685169_25685249_25687536_25687668_25690188_25690284_25695106_25695215_25703509_25703577_25704108_25704210_25709897_25709965_25711067_25711164_25714407_25714571_25718244_25718382_25721283_25721398_25722288_25723273_25728104
H1_mix_00060513	chr22	+	10165	5	FSM	ENSG00000225783.9	ENST00000613780.4	10143	5	-22	0	-17	0	multi-exon	FALSE	canonical	2	4	junction_2	8.22724133595217	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATGACTGTGGCCTATG	11	False	NA	15	True	ATTAAA	-17	NA	26657497	26676475	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_26657655_26663315_26663399_26665456_26666938_26667184_26667311_26668157
H1_mix_00060514	chr22	+	10039	4	FSM	ENSG00000225783.9	ENST00000616469.4	10069	4	30	0	-17	0	multi-exon	FALSE	canonical	2	4	junction_2	9.10433352249844	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATGACTGTGGCCTATG	11	False	NA	15	True	ATTAAA	-17	NA	26657497	26676475	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_26657655_26663315_26663399_26665456_26666938_26668157
H1_mix_00060521	chr22	+	4159	17	NNC	ENSG00000182944.18	novel	2400	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	65	junction_8	1131.88503584728	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATCCTTCTCGGCCTCTG	-3	True	NA	57	True	AATAAA	-21	NA	29268312	29300521	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_29268350_29272215_29272253_29272379_29272432_29273740_29273865_29278029_29278217_29282389_29282558_29286922_29287135_29288605_29290594_29291564_29291600_29292136_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299852_29300121
H1_mix_00060522	chr22	+	4428	11	NIC	ENSG00000187860.11	novel	4478	12	NA	NA	0	135	combination_of_known_junctions	FALSE	canonical	3	7	junction_9	15.2039468559976	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTTACATCTTATGTTA	4	True	NA	NA	False	TTTAAA	-19	NA	30357006	30378808	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_30357133_30361960_30362115_30365989_30366249_30369431_30369604_30370325_30370951_30371649_30371728_30372074_30372287_30373596_30373765_30373922_30374092_30376258_30376348_30376432
H1_mix_00060530	chr22	+	5412	3	FSM	ENSG00000253352.10	ENST00000643553.1	5412	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	58	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATACCCTTTTTTGCTT	1124	False	NA	0	True	NA	NA	NA	30970689	30978823	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_30971770_30972923_30973602_30975169
H1_mix_00060534	chr22	+	3319	8	NNC	ENSG00000138942.17	novel	2737	8	NA	NA	9	-2	intron_retention	FALSE	canonical	3	24	junction_2	64.9477026663196	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTATGAGCTTGGACTTC	-21	True	NA	-3	True	ATTAAA	-15	NA	31160191	31207010	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_31160304_31176261_31176418_31187046_31187271_31192683_31192703_31195468_31195582_31196935_31196991_31201497_31201616_31204488
H1_mix_00060541	chr22	+	3914	32	NIC	ENSG00000198089.16	novel	4031	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	34.4624544980652	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTCTCCCACTTTTCAT	16	True	NA	29	True	ATTAAA	-14	NA	31496535	31618547	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_31496638_31508258_31508377_31528689_31528864_31546860_31546972_31550253_31550349_31556941_31557060_31561289_31561393_31573057_31573215_31575230_31575393_31578381_31578453_31580271_31580365_31583874_31583973_31585067_31585135_31589446_31589578_31602211_31602294_31602606_31602786_31603743_31603820_31604308_31604405_31604868_31604946_31606327_31606431_31607936_31608034_31611142_31611304_31611765_31611841_31613141_31613217_31613353_31613531_31613601_31613856_31614788_31614861_31615047_31615280_31616744_31616878_31616999_31617079_31618114_31618227_31618313
H1_mix_00060542	chr22	+	3749	30	NIC	ENSG00000198089.16	novel	4031	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_15	36.3573229845332	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTCTCCCACTTTTCAT	16	True	NA	29	True	ATTAAA	-14	NA	31496535	31618547	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_31496638_31508254_31508377_31528689_31528864_31546860_31546972_31550253_31550349_31556941_31557060_31561289_31561393_31573057_31573215_31575230_31575393_31578381_31578453_31583874_31583973_31585067_31585135_31589446_31589578_31602211_31602294_31602606_31602786_31604308_31604405_31604868_31604946_31606327_31606431_31607936_31608034_31611142_31611304_31611765_31611841_31613141_31613217_31613353_31613531_31613601_31613856_31614788_31614861_31615047_31615280_31616744_31616878_31616999_31617079_31618114_31618227_31618313
H1_mix_00060543	chr22	+	3821	31	NIC	ENSG00000198089.16	novel	4031	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	34.3903087123878	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTCTCCCACTTTTCAT	16	True	NA	29	True	ATTAAA	-14	NA	31496535	31618547	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_31496638_31508258_31508377_31528689_31528864_31546860_31546972_31550253_31550349_31556941_31557060_31561289_31561393_31573057_31573215_31575230_31575393_31578381_31578453_31583874_31583973_31585067_31585135_31589446_31589578_31602211_31602294_31602606_31602786_31603743_31603820_31604308_31604405_31604868_31604946_31606327_31606431_31607936_31608034_31611142_31611304_31611765_31611841_31613141_31613217_31613353_31613531_31613601_31613856_31614788_31614861_31615047_31615280_31616744_31616878_31616999_31617079_31618114_31618227_31618313
H1_mix_00060546	chr22	+	2421	24	FSM	ENSG00000100150.20	ENST00000645693.1	2403	24	-18	0	13	0	multi-exon	FALSE	canonical	3	17	junction_22	40.68380541056	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGAGATTAGCATGGCCG	NA	False	NA	NA	False	ATTAAA	-14	NA	31753879	31837279	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_31753997_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813_31768864_31778098_31778169_31783906_31783986_31784813_31784876_31792032_31792103_31792744_31792818_31797599_31797704_31798581_31798657_31802703_31802839_31804161_31804224_31804841_31804916_31806121_31806192_31809610_31809648_31810520_31810642_31814991_31815213_31819021_31819226_31833914_31833981_31836971
H1_mix_00060556	chr22	+	2074	3	FSM	ENSG00000128309.17	ENST00000397225.2	2116	3	42	0	42	0	multi-exon	FALSE	canonical	3	116	junction_1	399.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGGGGCTGCCTCGGT	3256	False	NA	60	True	AATAAA	-23	NA	37023078	37029821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37023928_37024191_37024811_37029215
H1_mix_00060559	chr22	+	2969	16	NNC	ENSG00000100083.19	novel	2800	17	NA	NA	-27	0	intron_retention	FALSE	canonical	2	3	junction_12	68.7263171330071	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTGCTCTCGTGGCCCT	4726	False	NA	17	True	AATAAA	-18	NA	37613942	37633564	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_37614275_37616921_37616998_37618447_37618547_37620237_37620362_37620812_37620914_37621615_37621697_37623326_37623468_37623551_37623634_37624968_37625077_37625796_37625950_37629461_37629527_37629997_37630163_37630902_37631100_37631995_37632166_37632404_37632516_37632600
H1_mix_00060560	chr22	+	1260	8	NIC	ENSG00000100116.17	novel	1473	9	NA	NA	2	0	combination_of_known_junctions	TRUE	canonical	3	27	junction_1	117.84735890125	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGGTCTGCTTTATTG	21	False	NA	28	True	NA	NA	NA	37808015	37816897	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_37808164_37812886_37812989_37813462_37813610_37815125_37815281_37815417_37815501_37815662_37815835_37816199_37816322_37816566
H1_mix_00060561	chr22	+	1900	13	NNC	ENSG00000100129.18	novel	3220	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	713.881098098431	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCGTCTCATTATTGTA	-2	True	NA	29	True	AGTAAA	-18	NA	37849416	37888631	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_37849488_37850014_37850064_37851279_37851491_37855564_37855645_37858678_37858741_37862968_37863039_37863271_37863346_37870175_37870348_37874369_37874525_37875840_37876012_37877673_37878172_37886764_37886846_37888425
H1_mix_00060564	chr22	+	774	4	FSM	ENSG00000100142.16	ENST00000606538.5	760	4	-14	0	0	0	multi-exon	FALSE	canonical	3	1875	junction_3	34.6634613902818	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTCTGCGGCAGAGCTG	5	True	NA	42	True	NA	NA	NA	37953696	37967560	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_37953808_37956772_37956843_37959345_37959477_37967098
H1_mix_00060568	chr22	+	1053	4	NNC	ENSG00000100216.6	novel	2031	4	NA	NA	33	320	at_least_one_novel_splicesite	FALSE	canonical	2	91	junction_1	546.217498397438	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAAAGTGTCATCCTAAG	28	False	NA	14	True	ATTAAA	-11	NA	38681989	38684480	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_+_38682096_38682326_38682442_38682878_38682997_38683766
H1_mix_00060575	chr22	+	18280	23	FSM	ENSG00000100354.21	ENST00000454349.7	18280	23	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_10	21.5522141295111	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTATTGTGGTTTCCTG	-5	True	NA	7	True	AATAAA	-20	NA	40177924	40335808	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_40178141_40246014_40246103_40251178_40251201_40261831_40262174_40264687_40267037_40270121_40270281_40273424_40273601_40277076_40277152_40277998_40278045_40279994_40280144_40281118_40281290_40285644_40285771_40300454_40300587_40300909_40301006_40301149_40301334_40308511_40308650_40310816_40310994_40312504_40312652_40312901_40312998_40315282_40315508_40315941_40316013_40321089_40321230_40322853
H1_mix_00060576	chr22	+	1700	13	FSM	ENSG00000239900.14	ENST00000637666.2	1682	13	-18	0	-18	0	multi-exon	FALSE	canonical	0	0	junction_12	435.999681447386	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCCTAAACTAGAGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	40346481	40367837	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_40346712_40349831_40350036_40353072_40353118_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40361636_40362980_40363072_40364275_40364366_40366435_40366499_40367468
H1_mix_00060583	chr22	+	2819	19	FSM	ENSG00000100412.17	ENST00000679320.1	2819	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	139.164970049538	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGTGATTGGTGTCTGT	-21	True	NA	27	True	AAAACA	-25	NA	41469105	41528984	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_+_41469183_41499725_41499863_41507790_41508050_41511875_41511969_41515376_41515536_41515766_41515918_41517526_41517632_41518480_41518573_41520170_41520277_41522829_41522988_41523204_41523279_41523829_41523942_41524845_41524969_41525192_41525349_41526261_41526454_41527138_41527203_41527287_41527421_41527900_41528023_41528478
H1_mix_00060591	chr22	+	1108	7	NIC	ENSG00000100344.11	novel	2753	9	NA	NA	36	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	23.8583784491365	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCGACTTCCAAACATATT	50	False	NA	NA	False	AATAAA	-17	NA	43923840	43939393	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_+_43924099_43926934_43927168_43928823_43928890_43932877_43933088_43934605_43934667_43937050_43937273_43939335
H1_mix_00060611	chr22	-	3938	2	FSM	ENSG00000183307.4	ENST00000399875.1	3961	2	23	0	16	0	multi-exon	FALSE	canonical	1	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAAGCTTCCTGTGTGGTT	-2	True	NA	-7	True	AATAAA	-40	NA	17121344	17116298	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_17120144_17121251
H1_mix_00060622	chr22	-	1384	4	NNC	ENSG00000242259.9	novel	1005	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	198.840527950304	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCGGCCATGACCTACCA	13	True	NA	-37	True	AATAAA	-15	NA	19447692	19440885	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_19441695_19444011_19444391_19447377_19447546_19447664
H1_mix_00060624	chr22	-	2700	5	FSM	ENSG00000184470.21	ENST00000495655.2	2700	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	7.62807315119618	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGTGCTCTGCCTGCGGT	39	False	NA	-7	True	AATAAA	-17	NA	19881347	19875523	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_19877235_19878089_19878188_19878365_19878438_19880178_19880272_19880621
H1_mix_00060631	chr22	-	2885	17	ISM	ENSG00000100038.20	ENST00000398793.6	3107	18	6834	-6	53	0	3prime_fragment	TRUE	canonical	3	74	junction_13	41.4500829311595	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGGCCCCTTTGCTGGT	6896	False	NA	NA	False	ATTAAA	-22	NA	21975916	21957024	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_-_21957596_21958491_21958694_21959131_21959233_21959586_21959737_21960320_21960450_21962428_21962603_21962746_21962894_21963922_21964029_21964160_21964316_21965284_21965376_21967602_21967717_21968618_21968776_21970209_21970407_21971876_21971952_21972611_21972719_21974356_21974489_21975639
H1_mix_00060633	chr22	-	4229	18	NIC	ENSG00000100038.20	novel	4163	17	NA	NA	-411	-1	intron_retention	FALSE	canonical	1	3	junction_17	61.4597513667464	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGGGGCCCCTTTGCTGG	6432	False	NA	NA	False	ATTAAA	-21	NA	21976380	21957025	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_21958694_21959131_21959233_21959586_21959737_21960320_21960450_21962428_21962603_21962746_21962894_21963922_21964029_21964160_21964316_21965284_21965376_21967602_21967717_21968618_21968776_21970209_21970407_21970979_21971062_21971876_21971952_21972611_21972719_21974356_21974489_21975639_21975808_21975904
H1_mix_00060641	chr22	-	956	6	ISM	ENSG00000099958.15	ENST00000318109.12	3093	7	24	2231	22	0	intron_retention	FALSE	canonical	3	58	junction_1	27.3320324893704	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTTGGCCCACAGCACT	5381	False	NA	-30	True	AATAAA	-15	NA	23838982	23836733	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_-_23836963_23837063_23837155_23837658_23837855_23838351_23838446_23838563_23838638_23838710
H1_mix_00060642	chr22	-	865	7	NNC	ENSG00000099958.15	novel	969	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_6	44.10845220086	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTTGGCCCACAGCACT	-12	True	NA	-30	True	AATAAA	-15	NA	23839012	23836733	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_23836963_23837063_23837155_23837658_23837855_23838351_23838446_23838563_23838638_23838710_23838774_23838894
H1_mix_00060647	chr22	-	2316	4	NIC	ENSG00000178026.13	novel	1828	5	NA	NA	0	-6	intron_retention	FALSE	canonical	0	0	junction_2	66.9394419523265	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAAAGAGTGACACCCGC	34	False	NA	-40	True	NA	NA	NA	24593034	24585654	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_24586412_24588213_24588330_24588678_24589950_24592862
H1_mix_00060649	chr22	-	1940	7	FSM	ENSG00000128294.16	ENST00000398110.6	1968	7	28	0	28	0	multi-exon	FALSE	canonical	1	2	junction_6	158.726966832987	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGGGTTTTTTTTTTCTT	0	True	NA	16	True	AATAAA	-43	NA	26565340	26525745	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_26526268_26528213_26528263_26532694_26532746_26536287_26536487_26540788_26541719_26544603_26544676_26565223
H1_mix_00060652	chr22	-	1375	3	Antisense	novelGene_ENSG00000226169.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_2	0.5	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAGCGTGGAAAGGTCTT	5674	False	NA	-35	True	ATTAAA	-17	NA	27745105	27675759	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr22_-_27676208_27677333_27677526_27744370
H1_mix_00060654	chr22	-	1921	15	ISM	ENSG00000183765.23	ENST00000382580.6	1971	16	7111	-20	0	0	3prime_fragment	TRUE	canonical	3	32	junction_14	193.402931408888	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTGCTTCTGCTTGAT	7680	False	NA	-2	True	ATTAAA	-18	NA	28734727	28687742	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28724976_28725125_28725242_28725368_28730419_28730549_28734402
H1_mix_00060655	chr22	-	1591	13	FSM	ENSG00000183765.23	ENST00000402731.6	1591	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_10	216.955240519534	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTGCTTCTGCTTGAT	7680	False	NA	-2	True	ATTAAA	-18	NA	28734727	28687742	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28724885_28724924_28725242_28725368_28734402
H1_mix_00060656	chr22	-	1442	13	NIC	ENSG00000183765.23	novel	1510	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_7	207.163163687198	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGGCTTTGTGCTTCTG	10	True	NA	-8	True	ATTAAA	-12	NA	28741811	28687748	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28710005_28710060_28711908_28712018_28719394_28719486_28724976_28725125_28725242_28725368_28741768
H1_mix_00060657	chr22	-	1945	16	FSM	ENSG00000183765.23	ENST00000650281.1	1923	16	-5	-17	0	0	multi-exon	FALSE	canonical	1	1	junction_14	196.894286356918	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGGCTTTGTGCTTCTG	10	True	NA	-8	True	ATTAAA	-12	NA	28741811	28687748	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28724976_28725125_28725242_28725368_28734402_28734728_28738081_28738198_28741768
H1_mix_00060661	chr22	-	1555	7	FSM	ENSG00000100263.14	ENST00000413137.6	1555	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	264.886610961496	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGTTTAGAATAAAAACCAG	-10	True	NA	-58	True	NA	NA	NA	29267945	29259903	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_29260238_29260325_29260614_29260701_29260869_29261199_29261426_29265478_29265669_29267425_29267578_29267747
H1_mix_00060675	chr22	-	1988	10	ISM	ENSG00000184708.18	ENST00000397525.5	3695	19	-166	14691	71	-9426	5prime_fragment	FALSE	canonical	1	1	junction_9	58.7783028752012	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGAGTAAGTTGGAAATT	6654	False	NA	NA	False	AATAAA	-19	NA	31489753	31454057	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr22_-_31454377_31455135_31455316_31455851_31455988_31458474_31458651_31462931_31463134_31463680_31463968_31468174_31468303_31471843_31471918_31488622_31488746_31489390
H1_mix_00060693	chr22	-	946	7	FSM	ENSG00000100360.15	ENST00000417951.6	946	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	269.988888660256	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCCTGGAATGTTTTGAA	-2	True	NA	NA	False	NA	NA	NA	36776103	36762932	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_36763014_36763918_36764037_36766137_36766198_36767305_36767366_36767782_36767863_36767982_36768100_36775673
H1_mix_00060698	chr22	-	2597	11	Fusion	ENSG00000213923.13_ENSG00000244627.5	novel	2817	11	NA	NA	8264	8	multi-exon	FALSE	canonical	3	168	junction_10	321.675550827227	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTTGTCCACCTCTGTG	3	True	NA	-1	True	AATAAA	-27	NA	38336170	38290682	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr22_-_38291939_38293254_38293320_38294108_38294249_38294341_38294535_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38336124
H1_mix_00060699	chr22	-	540	5	NNC	ENSG00000244627.5	novel	679	4	NA	NA	0	3293	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	53.183644102299	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTGGTAGAATAACAAT	58	False	NA	NA	False	ATTAAA	-36	NA	38398860	38357105	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_38357295_38361398_38361561_38380369_38380424_38380936_38380991_38398779
H1_mix_00060700	chr22	-	1245	5	NNC	ENSG00000244627.5	novel	468	3	NA	NA	1	2107	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	67.753228705354	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTTTACTTCTATCTT	59	False	NA	NA	False	AATAAA	-36	NA	38398859	38366790	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_38367788_38369985_38370046_38380369_38380424_38380936_38380991_38398779
H1_mix_00060708	chr22	-	2415	19	NIC	ENSG00000100242.16	novel	4055	19	NA	NA	10	-381	combination_of_known_junctions	TRUE	canonical	3	18	junction_17	17.8238985080338	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGGGGCCACCCCGAGT	-9	True	NA	NA	False	NA	NA	NA	38755988	38736333	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_38736381_38738172_38738266_38738586_38738755_38738872_38738989_38739341_38739427_38739721_38739944_38740266_38740433_38741006_38741051_38741493_38741572_38742300_38742556_38745683_38745812_38748712_38748784_38749765_38749860_38750224_38750321_38750897_38751036_38751209_38751374_38752506_38752666_38754641_38754707_38755762
H1_mix_00060713	chr22	-	1305	9	FSM	ENSG00000100316.16	ENST00000401609.5	1289	9	0	-16	0	16	multi-exon	FALSE	canonical	3	26959	junction_1	3186.32907659818	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGAGAGGCTGGGACTGG	1202	False	NA	14	True	AATAAA	-35	NA	39318614	39312865	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_39312985_39313190_39313311_39313633_39313730_39314106_39314209_39314685_39314847_39315368_39315556_39316705_39316842_39317460_39317630_39318399
H1_mix_00060719	chr22	-	3587	13	NNC	ENSG00000100380.15	novel	3212	12	NA	NA	-337	49100	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	562.4709560403	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGATCTCATGAGACTTA	5118	False	NA	NA	False	NA	NA	NA	40856976	40775434	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_40775473_40824534_40826667_40827095_40827230_40829625_40829675_40830839_40830957_40832568_40832672_40835559_40835671_40835802_40835888_40840625_40840693_40844838_40844910_40848293_40848370_40850822_40850881_40856430
H1_mix_00060728	chr22	-	2634	1	FSM	ENSG00000270083.1	ENST00000602718.1	399	1	-744	-1491	-744	1491	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGCGCCCAGCCTTTTTTT	-11	True	NA	NA	False	NA	NA	NA	42090772	42088138	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_42088100_42090800
H1_mix_00060735	chr22	-	8573	6	FSM	ENSG00000100207.21	ENST00000683686.1	8573	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	49.9503753739649	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAAAAAATCAAAAAAATAA	1026	False	NA	-64	True	TTTAAA	-21	NA	42269616	42160052	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_42161359_42168608_42168737_42169846_42169897_42179608_42179703_42209650_42215342_42268312
H1_mix_00060740	chr22	-	3487	9	FSM	ENSG00000100227.19	ENST00000451060.6	3491	9	4	0	4	0	multi-exon	FALSE	canonical	1	1	junction_7	203.528215181581	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGAGTTATCTTTTTT	4941	False	NA	-6	True	AATAAA	-15	NA	42614958	42583721	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_42585969_42587505_42587573_42591954_42592085_42595536_42595615_42596185_42596366_42599697_42599794_42601969_42602108_42602769_42603161_42614798
H1_mix_00060745	chr22	-	3922	23	NIC	ENSG00000159307.20	novel	9795	22	NA	NA	12	-5951	combination_of_known_junctions	FALSE	canonical	1	1	junction_16	7.05937042120625	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGCATTTGCATTTGCC	-4	True	NA	-7	True	ATTAAA	-8	NA	43343360	43203230	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_43204150_43207533_43207614_43208071_43208225_43210042_43210241_43210921_43211084_43212424_43212593_43214089_43214252_43218254_43218459_43220449_43220588_43221172_43221290_43222637_43222743_43223096_43223217_43227373_43227497_43229071_43229189_43231752_43231876_43238837_43238955_43255487_43255578_43258218_43258336_43262719_43262846_43291045_43291181_43319936_43320066_43339103_43339236_43343173
H1_mix_00060746	chr22	-	2197	7	FSM	ENSG00000100341.13	ENST00000381198.7	2000	7	0	-197	0	-1	multi-exon	FALSE	canonical	0	0	junction_5	6.59334681495083	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATTCTTTCATTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	43892013	43879678	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_43880886_43881557_43881675_43884212_43884346_43886302_43886489_43887590_43887652_43889328_43889496_43891687
H1_mix_00060753	chr22	-	2436	4	NNC	ENSG00000056487.16	novel	575	2	NA	NA	-33	1463	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	25.781130050226	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGCCGGGCACAGTGGC	NA	False	NA	-12	True	AATAAA	-23	NA	45010038	44967524	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_44969206_44971286_44971433_45008544_45008611_45009495
H1_mix_00060760	chr22	-	4488	13	NNC	ENSG00000100425.19	novel	4911	13	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_8	46.0316165501737	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTGTGGCCATTTTATTCC	10	True	NA	-6	True	AATAAA	-14	NA	49827858	49773282	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_49774417_49775590_49775746_49776049_49776160_49777033_49777162_49777677_49777814_49787389_49787495_49794033_49794295_49797804_49798118_49798572_49798687_49798987_49799120_49804203_49804361_49822950_49824332_49827496
H1_mix_00060765	chr22	-	5274	23	FSM	ENSG00000128159.12	ENST00000498611.5	5274	23	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_7	68.826302511143	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCAGCTCTCTCTCCTGG	-5	True	NA	-2	True	AATAAA	-18	NA	50244992	50217688	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50217828_50217917_50218403_50218487_50218621_50218702_50218898_50219067_50219210_50219287_50219792_50219956_50220016_50221274_50221875_50222027_50222103_50222453_50222593_50224140_50224257_50224331_50224421_50224510_50224593_50225793_50225944_50226049_50226190_50226286_50226379_50226732_50226843_50226998_50227078_50227906_50228029_50229403_50229578_50233315_50233527_50240203_50240368_50243718
H1_mix_00060770	chr22	-	6270	36	NNC	ENSG00000196576.16	novel	6383	37	NA	NA	-3993	-1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_35	51.4262221685651	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGCGGGTTGGCTGAG	3	True	NA	-11	True	AATACA	-11	NA	50293554	50274985	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr22_-_50275809_50275888_50275964_50276628_50276705_50276841_50276907_50277590_50277739_50277852_50278014_50278116_50278272_50278434_50278520_50278595_50278697_50278854_50279012_50279629_50279777_50280004_50280072_50280488_50280671_50280743_50280974_50281088_50281190_50281359_50281500_50281565_50281743_50281853_50282082_50282183_50282314_50282710_50282882_50283049_50283187_50283336_50283446_50283601_50283751_50283832_50283991_50284131_50284214_50284572_50284666_50285799_50285902_50285989_50286099_50286172_50286288_50287110_50287265_50287666_50287794_50287936_50288038_50288742_50288872_50288959_50289143_50289516_50290598_50293532
H1_mix_00060776	chr22	-	5041	27	NIC	ENSG00000254413.8	novel	4906	27	NA	NA	120	8	intron_retention	FALSE	canonical	3	60	junction_22	111.184857265759	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTCCCTGGGGCCATTT	-21	True	NA	-22	True	AATAAA	-21	NA	50582845	50568860	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr22_-_50569082_50569335_50569422_50569575_50569669_50570292_50570407_50570890_50571044_50571157_50571293_50571374_50571540_50572005_50572123_50572202_50572309_50572874_50573061_50573519_50573716_50574334_50574420_50574492_50574601_50576034_50576113_50576197_50576336_50576535_50577035_50577323_50577464_50577774_50577935_50578548_50578660_50579035_50579256_50579425_50579508_50579726_50579803_50579973_50580083_50580189_50580272_50580357_50580417_50580564_50580661_50581419
H1_mix_00060778	chr22	-	1894	9	FSM	ENSG00000100299.18	ENST00000356098.9	1895	9	1	0	1	0	multi-exon	FALSE	canonical	3	7	junction_8	14.9410299176462	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTCCAATCCTGGGGTAA	-34	True	NA	-18	True	NA	NA	NA	50628169	50625017	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr22_-_50625465_50625578_50625682_50625935_50626064_50626153_50626279_50626590_50626761_50626833_50627053_50627165_50627407_50627555_50627793_50627945
H1_mix_00060787	chr22_KI270733v1_random	+	4492	2	Intergenic	novelGene_865	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	130201	179772	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_KI270733v1_random_+_134166_179244
H1_mix_00060788	chr22_KI270733v1_random	+	4492	2	Intergenic	novelGene_866	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	130201	179772	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_KI270733v1_random_+_131696_176774
H1_mix_00060789	chr22_KI270733v1_random	+	813	4	Intergenic	novelGene_869	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	36	junction_1	33.4896335536171	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGGTGTGAACGTTTCTC	NA	False	NA	NA	False	AATAAA	-15	NA	138283	140657	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_KI270733v1_random_+_138347_139387_139525_139917_140015_140141
H1_mix_00060795	chr22_KI270733v1_random	+	5064	1	Intergenic	novelGene_867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCGCGCGCGCGCGCGCGC	NA	False	NA	NA	False	NA	NA	NA	130215	135279	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_KI270733v1_random_+_130200_135300
H1_mix_00060800	chr22_KI270733v1_random	-	11762	3	Intergenic	novelGene_864	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_2	30	327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGATCACGAAGAGCCCCCC	NA	False	NA	NA	False	NA	NA	NA	179772	122708	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_KI270733v1_random_-_133182_133404_134057_179135
H1_mix_00060802	chr22_KI270733v1_random	-	5012	1	Intergenic	novelGene_868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	253	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTCCTCCGCTGACTAA	NA	False	NA	NA	False	NA	NA	NA	135279	130267	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_KI270733v1_random_-_130300_135300
H1_mix_00060803	chr22_KI270734v1_random	+	1107	5	Intergenic	novelGene_870	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	73	junction_3	23.4134042804544	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTTGTGTGATAGCTG	NA	False	NA	NA	False	AATAAA	-22	NA	131600	137393	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_KI270734v1_random_+_131756_131835_131997_135442_135544_136158_136300_136844
H1_mix_00060805	chr22_KI270734v1_random	-	2281	14	Intergenic	novelGene_871	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	228	junction_9	76.7491880727248	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGGCTTCCAGCATCAT	NA	False	NA	NA	False	NA	NA	NA	161583	137998	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_KI270734v1_random_-_138668_138742_138832_142193_142293_143613_143790_144748_144896_145003_145097_146639_146722_147623_147704_148115_148233_148413_148479_150349_150500_150986_151022_156288_156498_161313
H1_mix_00060807	chr22_KI270734v1_random	-	1996	12	Intergenic	novelGene_872	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	54	junction_9	136.193044809731	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCCAGACTCTGGCTTC	NA	False	NA	NA	False	NA	NA	NA	161581	138007	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr22_KI270734v1_random_-_138668_138742_138832_142193_142293_143613_143790_144748_144896_145003_145097_146639_146722_147623_147704_148115_148233_150349_150500_150986_151022_161313
H1_mix_00060809	chr3	+	639	5	FSM	ENSG00000144619.15	ENST00000422330.5	658	5	19	0	19	0	multi-exon	FALSE	canonical	0	0	junction_1	2.48746859276655	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTTGCTTGTAAGTAGCA	-4	True	NA	NA	False	NA	NA	NA	2098831	2745687	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_2098979_2339177_2339234_2571415_2571559_2736214_2736342_2745521
H1_mix_00060810	chr3	+	417	2	FSM	ENSG00000144619.15	ENST00000490876.1	551	2	0	134	0	-134	multi-exon	FALSE	canonical	3	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGGGAAGGTACCTGGCT	18	True	NA	NA	False	NA	NA	NA	2098927	2099639	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_2098979_2099273
H1_mix_00060812	chr3	+	2273	8	FSM	ENSG00000072756.17	ENST00000251607.11	2252	8	-21	0	-14	0	multi-exon	FALSE	canonical	3	275	junction_1	40.4646482142381	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTATTTCAGCTGCTAT	NA	False	NA	6	True	AATAAA	-15	NA	3126918	3149023	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_3126991_3129013_3129189_3137259_3137454_3140509_3140649_3144583_3144711_3146429_3146624_3147449_3147704_3147905
H1_mix_00060813	chr3	+	2196	8	FSM	ENSG00000072756.17	ENST00000280591.10	2180	8	-16	0	3	0	multi-exon	FALSE	canonical	1	5	junction_6	123.774811983831	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTATTTCAGCTGCTAT	-17	True	NA	6	True	AATAAA	-15	NA	3126935	3149023	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_3126991_3129013_3129189_3137259_3137454_3140509_3140649_3144583_3144711_3146429_3146564_3147449_3147704_3147905
H1_mix_00060814	chr3	+	2694	9	NIC	ENSG00000072756.17	novel	1871	10	NA	NA	3	-112	intron_retention	FALSE	canonical	3	30	junction_8	112.840318592248	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTTTACTTAGGTATGT	-17	True	NA	NA	False	NA	NA	NA	3126935	3150767	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_3126991_3129013_3129189_3137259_3137454_3140509_3140649_3144583_3144711_3146429_3146624_3147449_3147704_3147905_3149234_3150539
H1_mix_00060815	chr3	+	1873	10	FSM	ENSG00000072756.17	ENST00000434583.5	1871	10	-2	0	0	0	multi-exon	FALSE	canonical	3	21	junction_8	140.138027196998	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTGTCTGGACTTATTT	10	True	NA	NA	False	NA	NA	NA	3126962	3150879	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_3126991_3129013_3129189_3137259_3137454_3140509_3140649_3144583_3144711_3146429_3146624_3147449_3147704_3147905_3148188_3149093_3149234_3150539
H1_mix_00060816	chr3	+	2247	3	FSM	ENSG00000072756.17	ENST00000402675.5	1935	3	0	-312	0	312	multi-exon	FALSE	canonical	3	39	junction_2	1.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATCACTGAAGCCTGGGAG	3	True	NA	NA	False	NA	NA	NA	3127019	3130991	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_3128019_3129013_3129189_3129918
H1_mix_00060817	chr3	+	483	3	FSM	ENSG00000072756.17	ENST00000413000.1	483	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	148	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGAGCAGTGAGGGATTT	3	True	NA	NA	False	NA	NA	NA	3127019	3137297	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_3127290_3129013_3129189_3137259
H1_mix_00060818	chr3	+	494	1	FSM	ENSG00000271870.1	ENST00000607052.1	494	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTTGTTATTTCTGT	NA	False	NA	15	True	AATAAA	-21	NA	3152941	3153435	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_3152900_3153400
H1_mix_00060819	chr3	+	9128	2	FSM	ENSG00000175928.6	ENST00000319331.4	5960	2	0	-3168	0	3168	multi-exon	FALSE	canonical	3	1339	junction_1	0	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGGCTGTATAACCATC	-3	True	NA	8	True	ATTAAA	-21	NA	3799430	3853002	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_3799920_3844363
H1_mix_00060820	chr3	+	9056	2	FSM	ENSG00000175928.6	ENST00000496115.1	592	2	171	-8635	171	3380	multi-exon	FALSE	canonical	3	146	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCACAGGGAAGAAGAACCC	1273	False	NA	NA	False	NA	NA	NA	3801041	3853214	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_3801247_3844363
H1_mix_00060821	chr3	+	2439	3	FSM	ENSG00000170364.13	ENST00000358065.5	2076	3	-61	-302	-24	302	multi-exon	FALSE	canonical	3	49	junction_1	3.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGGCCCAAGAATAATAAC	NA	False	NA	NA	False	AATAAA	-45	NA	4303307	4317567	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_4303527_4312897_4313762_4316211
H1_mix_00060822	chr3	+	1368	3	FSM	ENSG00000170364.13	ENST00000425046.1	1359	3	-9	0	-4	0	multi-exon	FALSE	canonical	3	9	junction_1	23.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATAATGATTTAAAATTC	-10	True	NA	14	True	AATAAA	-16	NA	4303327	4317265	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_4303527_4313646_4313762_4316211
H1_mix_00060824	chr3	+	1350	3	NIC	ENSG00000170364.13	novel	1676	4	NA	NA	-4	2	combination_of_known_splicesites	FALSE	canonical	1	5	junction_1	25.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAATGATTTAAAATTCAC	-10	True	NA	16	True	AATAAA	-18	NA	4303327	4317267	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_4303527_4313666_4313762_4316211
H1_mix_00060825	chr3	+	1681	2	FSM	ENSG00000170364.13	ENST00000430981.1	1671	2	-24	14	0	-14	multi-exon	FALSE	canonical	3	49	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTCTGTCTGACTCCTG	-1	True	NA	11	True	AATAAA	-11	NA	4303336	4314388	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_4303527_4312897
H1_mix_00060826	chr3	+	1667	4	FSM	ENSG00000170364.13	ENST00000425863.5	1657	4	-10	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	23.0410262117139	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATAATGATTTAAAATTC	-7	True	NA	14	True	AATAAA	-16	NA	4303360	4317265	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_4303527_4312897_4313230_4313646_4313762_4316211
H1_mix_00060827	chr3	+	1253	2	NIC	ENSG00000170364.13	novel	1359	3	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	37	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATAATGATTTAAAATTC	-10	True	NA	14	True	AATAAA	-16	NA	4303327	4317265	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_4303527_4316211
H1_mix_00060829	chr3	+	2955	7	FSM	ENSG00000134108.14	ENST00000256496.8	2933	7	-22	0	21	0	multi-exon	FALSE	canonical	3	204	junction_4	19.9833263830958	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAATTGATATTGTGATTT	NA	False	NA	14	True	AATAAA	-16	NA	5122269	5180911	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_5122589_5170502_5170584_5172149_5172224_5172646_5172741_5174016_5174085_5174343_5174415_5178663
H1_mix_00060831	chr3	+	6663	12	FSM	ENSG00000134109.11	ENST00000256497.9	6113	12	-538	-12	-477	12	multi-exon	FALSE	canonical	3	57	junction_10	9.14980919278991	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTTTACATTCTCAT	6876	False	NA	35	True	ATTAAA	-29	NA	5187168	5219970	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_5188315_5195208_5195282_5199591_5199696_5201752_5201925_5202965_5203150_5205066_5205242_5207152_5207274_5208092_5208264_5210174_5210249_5211119_5211217_5213318_5213523_5215828
H1_mix_00060834	chr3	+	7307	6	FSM	ENSG00000071282.12	ENST00000157600.8	8284	6	-16	993	0	-993	multi-exon	FALSE	canonical	3	76	junction_2	7.52063827078527	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACGATCTCCTGGTCTGA	218	False	NA	NA	False	TTTAAA	-3	NA	8501806	8573675	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_8501981_8532736_8532826_8537184_8537441_8548567_8548904_8565431_8565648_8567439
H1_mix_00060836	chr3	+	1039	1	FSM	ENSG00000215160.3	ENST00000383606.3	1017	1	39	-61	39	61	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTTGATGGCTTTTAT	NA	False	NA	NA	False	ATTAAA	-42	NA	8688181	8689220	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_8688200_8689200
H1_mix_00060837	chr3	+	3961	10	FSM	ENSG00000134077.16	ENST00000345094.7	3961	10	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	69.1339726389241	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTTAGTTACAGACCAGA	-14	True	NA	20	True	AATAAA	-21	NA	9363051	9386791	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9363333_9365015_9365321_9366907_9366986_9371059_9371537_9374515_9374647_9377818_9377889_9380502_9380619_9383198_9383310_9384211_9384336_9384523
H1_mix_00060838	chr3	+	3801	10	FSM	ENSG00000134077.16	ENST00000452837.7	3754	10	10	-57	10	57	multi-exon	FALSE	canonical	3	110	junction_1	98.1960749511021	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGGGGAAAAAAATGTAAATA	-2	True	NA	77	True	AATATA	-5	NA	9363063	9386848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9363128_9365015_9365321_9366907_9366986_9371059_9371537_9374515_9374647_9377818_9377889_9380502_9380619_9383198_9383310_9384211_9384336_9384523
H1_mix_00060839	chr3	+	2390	10	FSM	ENSG00000134077.16	ENST00000515662.6	2390	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	131.267326898627	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGGCTCACGACTGTA	32	False	NA	12	True	TTTAAA	-18	NA	9363097	9384870	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9363729_9365015_9365321_9366907_9366986_9371059_9371537_9374515_9374647_9377818_9377889_9380502_9380619_9383198_9383310_9384211_9384336_9384523
H1_mix_00060840	chr3	+	2275	10	NIC	ENSG00000134077.16	novel	2390	10	NA	NA	11	55	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	111.315367811956	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGAGGTCCGGAGACCAG	-1	True	NA	67	True	NA	NA	NA	9363064	9384925	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_9363526_9365015_9365321_9366907_9366986_9371059_9371537_9374515_9374647_9377818_9377889_9380502_9380619_9383198_9383310_9384211_9384336_9384523
H1_mix_00060841	chr3	+	2843	10	NNC	ENSG00000134077.16	novel	2390	10	NA	NA	21	9	intron_retention	FALSE	canonical	3	22	junction_1	124.58801242297	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACGACTGTAATTCCAGCA	2	True	NA	21	True	TTTAAA	-27	NA	9363118	9384879	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_9364194_9365015_9365321_9366907_9366986_9371059_9371537_9374515_9374647_9377818_9377889_9380502_9380619_9383198_9383310_9384211_9384336_9384523
H1_mix_00060842	chr3	+	1835	10	FSM	ENSG00000168137.20	ENST00000431285.5	1824	10	-11	0	-11	0	multi-exon	FALSE	canonical	3	71	junction_6	83.1678356631269	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCACCAAAGGGTTGAG	-22	True	NA	NA	False	NA	NA	NA	9397603	9440698	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9397978_9424466_9424527_9428822_9429010_9429826_9430052_9433369_9433563_9433844_9433951_9434276_9434486_9434823_9434883_9435727_9435907_9440455
H1_mix_00060849	chr3	+	596	5	FSM	ENSG00000168137.20	ENST00000415650.5	579	5	-17	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	102.375228937473	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGAGCGTGTATTCCAC	-8	True	NA	NA	False	NA	NA	NA	9397855	9433878	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9397978_9424466_9424527_9428822_9429010_9433369_9433563_9433844
H1_mix_00060853	chr3	+	6463	21	FSM	ENSG00000168137.20	ENST00000407969.5	6463	21	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_19	107.575136532565	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTGTCCAATTTTGTG	2671	False	NA	25	True	AATAAA	-33	NA	9428924	9478154	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9429010_9433844_9433951_9434276_9434486_9434823_9434883_9435727_9435907_9440455_9440699_9441592_9441742_9442127_9442246_9443307_9443418_9445047_9445301_9445656_9445741_9447049_9447308_9447685_9448007_9448387_9448631_9453738_9453869_9464424_9464673_9470458_9470930_9473235_9473538_9474448_9474583_9475067_9475157_9475482
H1_mix_00060856	chr3	+	2361	18	FSM	ENSG00000163719.20	ENST00000353332.9	2368	18	7	0	7	0	multi-exon	FALSE	canonical	3	234	junction_17	110.94254880319	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGTGTCATCATTTGGT	NA	False	NA	24	True	AATAAA	-24	NA	9649439	9702393	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9649743_9653620_9653770_9662266_9662376_9668718_9668795_9669431_9669493_9671047_9671171_9672684_9672759_9677316_9677388_9677983_9678059_9683177_9683245_9684584_9684671_9684887_9684965_9685210_9685248_9687820_9687892_9688695_9688755_9688943_9689083_9689963_9690144_9701789
H1_mix_00060859	chr3	+	2112	17	FSM	ENSG00000163719.20	ENST00000351233.9	2105	17	-7	0	0	0	multi-exon	FALSE	canonical	3	161	junction_16	125.464247272878	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTCTTGTGTCATCATT	16	True	NA	20	True	AATAAA	-20	NA	9649504	9702389	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9649743_9653620_9653770_9662266_9662376_9668718_9668795_9669431_9669493_9671047_9671171_9672684_9672759_9677316_9677388_9677983_9678059_9683177_9683245_9684584_9684671_9684887_9684965_9685210_9685248_9687820_9687892_9688695_9688755_9688943_9689083_9701789
H1_mix_00060860	chr3	+	2511	19	FSM	ENSG00000163719.20	ENST00000296003.9	2452	19	-65	6	7	0	multi-exon	TRUE	canonical	3	213	junction_17	130.310514721236	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCACTCTTGTGTCATCA	NA	False	NA	18	True	AATAAA	-18	NA	9649439	9702387	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9649743_9653620_9653770_9662266_9662376_9668718_9668795_9669431_9669493_9671047_9671171_9672684_9672759_9677316_9677388_9677983_9678059_9683177_9683245_9684584_9684671_9684887_9684965_9685210_9685248_9687820_9687892_9688695_9688755_9688943_9689083_9689963_9690144_9697710_9697867_9701789
H1_mix_00060863	chr3	+	559	1	FSM	ENSG00000163719.20	ENST00000606184.1	2966	1	-479	2886	-479	-2710	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGGCTTTGTTATCAGA	NA	False	NA	NA	False	NA	NA	NA	9698947	9699506	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9698900_9699500
H1_mix_00060864	chr3	+	1835	16	NIC	ENSG00000144550.14	novel	2042	21	NA	NA	1411	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	4.69704398768228	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTCTCATGCATGTTG	1408	False	NA	7	True	AATAAA	-17	NA	9705243	9729908	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_9705501_9705986_9706064_9712540_9712605_9712724_9712829_9712974_9713080_9714913_9714956_9715288_9715365_9715472_9715527_9715973_9716036_9717057_9717105_9718028_9718211_9718474_9718603_9725948_9726052_9726664_9726723_9727112_9727187_9729506
H1_mix_00060865	chr3	+	4690	13	FSM	ENSG00000156983.17	ENST00000683639.1	4666	13	-24	0	1	0	multi-exon	FALSE	canonical	3	30	junction_7	23.250298683864	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	-31	True	NA	NA	False	NA	NA	NA	9731729	9747873	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9732139_9734130_9734740_9738998_9739959_9740778_9740942_9741307_9741440_9742024_9742154_9742943_9743254_9743577_9743902_9744223_9744509_9745007_9745156_9745572_9745931_9746299_9746455_9747165
H1_mix_00060867	chr3	+	4716	14	FSM	ENSG00000156983.17	ENST00000683743.1	4698	14	-18	0	1	0	multi-exon	FALSE	canonical	3	30	junction_7	22.3715267047332	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCAATTTAGAATTCTTT	-31	True	NA	14	True	AATAAA	-1	NA	9731729	9748001	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9732139_9734130_9734740_9738998_9739959_9740778_9740942_9741307_9741440_9742024_9742154_9742943_9743254_9743577_9743902_9744223_9744509_9745007_9745156_9745572_9745710_9745811_9745931_9746299_9746455_9747165
H1_mix_00060869	chr3	+	4748	14	FSM	ENSG00000156983.17	ENST00000383829.7	4743	14	-5	0	1	0	multi-exon	FALSE	canonical	3	30	junction_7	25.5630095180771	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGTTCTTGCCCCCTG	-31	True	NA	28	True	AATAAA	-15	NA	9731729	9748015	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9732139_9734130_9734740_9738998_9739959_9740778_9740942_9741307_9741440_9742024_9742172_9742943_9743254_9743577_9743902_9744223_9744509_9745007_9745156_9745572_9745710_9745811_9745931_9746299_9746455_9747165
H1_mix_00060871	chr3	+	4407	12	FSM	ENSG00000156983.17	ENST00000682208.1	4420	12	0	13	0	1	multi-exon	FALSE	canonical	3	49	junction_6	20.3307364100567	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAATTTAGAATTCTTTG	1636	False	NA	15	True	AATAAA	-2	NA	9734130	9748002	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9734740_9738998_9739959_9740778_9740942_9741307_9741440_9742024_9742154_9742943_9743254_9743580_9743902_9744223_9744509_9745007_9745156_9745572_9745931_9746299_9746455_9747165
H1_mix_00060872	chr3	+	1630	7	FSM	ENSG00000114026.22	ENST00000344629.12	1630	7	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_6	41.424630354416	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGAGGAGTGGTAGGG	-23	True	NA	19	True	AATAAA	-23	NA	9749951	9757407	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9754703_9754886_9756470_9756622_9756766_9756817_9757060
H1_mix_00060873	chr3	+	1942	5	FSM	ENSG00000114026.22	ENST00000349503.9	1950	5	8	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	79.6884558766199	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCTAGGGTATTCTTTC	-23	True	NA	24	True	AATAAA	-33	NA	9749951	9766668	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9754703_9754886_9765808
H1_mix_00060874	chr3	+	2212	7	FSM	ENSG00000114026.22	ENST00000302036.11	2220	7	8	0	0	0	multi-exon	FALSE	canonical	3	26	junction_6	61.9015795885336	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATCTCTCGTGGTGAAA	-23	True	NA	93	True	NA	NA	NA	9749951	9766737	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9754703_9754886_9756470_9756622_9756766_9756817_9765808
H1_mix_00060875	chr3	+	1838	6	FSM	ENSG00000114026.22	ENST00000339511.9	1815	6	-23	0	6	0	multi-exon	FALSE	canonical	3	166	junction_3	20.1454709550311	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAATAAAATAGAAACATTT	-17	True	NA	-11	True	NA	NA	NA	9749957	9757377	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9754703_9754886_9756470_9756622_9756766
H1_mix_00060877	chr3	+	942	6	FSM	ENSG00000241553.13	ENST00000498623.6	942	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	352.430078171543	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCCGGGACAGATTTTTT	NA	False	NA	-40	True	NA	NA	NA	9792494	9806442	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9792706_9797658_9797778_9800184_9800297_9801660_9801757_9803842_9804014_9806209
H1_mix_00060878	chr3	+	591	5	FSM	ENSG00000241553.13	ENST00000485273.1	577	5	-14	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	407.880114126688	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTAGGGGCCTTTAGCT	-9	True	NA	NA	False	NA	NA	NA	9793081	9804013	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9793175_9797658_9797778_9800184_9800297_9801660_9801757_9803842
H1_mix_00060881	chr3	+	1433	6	FSM	ENSG00000241553.13	ENST00000397261.8	1433	6	0	0	0	0	multi-exon	FALSE	canonical	3	481	junction_1	178.834672253453	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTATGCTGTGTGTGTGT	-9	True	NA	39	True	ATTAAA	-31	NA	9793081	9807101	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9793125_9797658_9797778_9800184_9800297_9801660_9801757_9803842_9804014_9806209
H1_mix_00060884	chr3	+	926	6	FSM	ENSG00000241553.13	ENST00000433034.1	926	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	352.430078171543	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTATACGTTATTGGTTG	26	False	NA	90	True	TTTAAA	-33	NA	9793116	9806572	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9793182_9797658_9797778_9800184_9800297_9801660_9801757_9803842_9804014_9806209
H1_mix_00060885	chr3	+	4834	5	FSM	ENSG00000214021.17	ENST00000383827.5	4834	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	2.17944947177034	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCTTTGCAGATGTAAATA	8074	False	NA	NA	False	NA	NA	NA	9818371	9836315	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9820742_9825799_9825949_9826996_9827241_9828959_9829396_9834680
H1_mix_00060886	chr3	+	747	1	FSM	ENSG00000214021.17	ENST00000602338.1	693	1	-55	1	0	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCTTTTGTGGTCCATCA	1335	False	NA	NA	False	AGTAAA	-17	NA	9820293	9821040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9820300_9821000
H1_mix_00060887	chr3	+	1743	6	FSM	ENSG00000214021.17	ENST00000438141.5	1743	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	7.26636084983398	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCCCCTGCTTCGATTCC	1335	False	NA	-65	True	NA	NA	NA	9820293	9835332	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9820742_9825799_9825949_9826996_9827241_9828959_9829396_9834680_9834908_9835093
H1_mix_00060888	chr3	+	616	3	FSM	ENSG00000214021.17	ENST00000466245.1	616	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	6	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGACCGGATGCTGGACCG	6902	False	NA	NA	False	NA	NA	NA	9825860	9829335	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9825949_9826996_9827149_9828959
H1_mix_00060890	chr3	+	2404	19	FSM	ENSG00000163702.20	ENST00000403601.8	2409	19	5	0	1	0	multi-exon	FALSE	canonical	3	13	junction_6	18.6940936074063	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCCCACACGCGTCTCC	-25	True	NA	8	True	AATAAA	-24	NA	9917102	9933621	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9917421_9917712_9917735_9917922_9918076_9918334_9918410_9918499_9918610_9920490_9920603_9920924_9920970_9923880_9924021_9924231_9924292_9928165_9928221_9928304_9928487_9928579_9928631_9929851_9929898_9930027_9930150_9930399_9930460_9930894_9930944_9932607_9932704_9932819_9932859_9932952
H1_mix_00060891	chr3	+	2359	18	FSM	ENSG00000163702.20	ENST00000383812.9	2388	18	29	0	1	0	multi-exon	FALSE	canonical	3	35	junction_17	14.0019771218853	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCCCACACGCGTCTCC	-25	True	NA	8	True	AATAAA	-24	NA	9917102	9933621	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9917421_9917712_9917735_9917922_9918076_9918334_9918410_9918499_9918610_9920490_9920603_9923880_9924021_9924231_9924292_9928165_9928221_9928304_9928487_9928579_9928631_9929851_9929898_9930027_9930150_9930399_9930460_9930894_9930944_9932607_9932704_9932819_9932859_9932952
H1_mix_00060894	chr3	+	2147	18	FSM	ENSG00000163702.20	ENST00000413608.2	2147	18	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	19.4224569483378	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATGTGGCCCACACGCG	125	False	NA	3	True	AATAAA	-19	NA	9917315	9933616	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9917421_9917712_9917735_9917922_9918076_9918334_9918410_9918499_9918610_9920490_9920603_9920924_9920970_9923880_9924021_9924231_9924292_9928165_9928221_9928304_9928487_9928579_9928631_9929851_9929898_9930027_9930150_9930399_9930460_9930894_9930944_9932607_9932704_9932952
H1_mix_00060897	chr3	+	3393	8	FSM	ENSG00000163703.20	ENST00000683888.1	3370	8	-23	0	1	0	multi-exon	FALSE	canonical	3	90	junction_3	12.7823219761529	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAAAAGGCATCAGTCTT	NA	False	NA	14	True	AATAAA	-15	NA	9933810	9945024	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076
H1_mix_00060898	chr3	+	1931	11	FSM	ENSG00000163703.20	ENST00000673737.2	1917	11	-14	0	1	0	multi-exon	FALSE	canonical	3	10	junction_6	35.5275949087466	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTCCATGCCAGCTGTCAT	NA	False	NA	NA	False	NA	NA	NA	9933810	9945196	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9933853_9934419_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941017_9941110_9941207_9942812_9942897_9943076_9943173_9943380_9943516_9944364
H1_mix_00060899	chr3	+	2718	10	FSM	ENSG00000163703.20	ENST00000383811.8	2695	10	-23	0	1	0	multi-exon	FALSE	canonical	3	90	junction_3	13.3896956880014	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCAAGCAACCTTTCCTC	NA	False	NA	21	True	AATAAA	-33	NA	9933810	9945406	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076_9943173_9943380_9943516_9944364
H1_mix_00060900	chr3	+	2219	11	FSM	ENSG00000163703.20	ENST00000452070.6	2196	11	-23	0	1	0	multi-exon	FALSE	canonical	3	43	junction_1	23.7210876647763	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCAAGCAACCTTTCCTC	NA	False	NA	21	True	AATAAA	-33	NA	9933810	9945406	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9933921_9934419_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076_9943173_9943380_9943516_9944364
H1_mix_00060901	chr3	+	1995	12	FSM	ENSG00000163703.20	ENST00000326434.9	1994	12	-1	0	0	0	multi-exon	FALSE	canonical	3	16	junction_10	39.496835316263	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATCAGTCTTACTACCTG	13	True	NA	22	True	AATAAA	-23	NA	9933854	9945032	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9933921_9934419_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076_9943173_9943380_9943516_9943901_9944096_9944364
H1_mix_00060906	chr3	+	599	4	NIC	ENSG00000180385.9	novel	671	4	NA	NA	65	-12	combination_of_known_junctions	FALSE	canonical	2	7	junction_2	17.2111075245674	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGATAAGTGACCGGTTCT	66	False	NA	10	True	AATAAA	-8	NA	9986975	10006978	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_9987265_9987905_9988008_9988711_9988748_10006806
H1_mix_00060907	chr3	+	5219	43	FSM	ENSG00000144554.13	ENST00000287647.7	5219	43	0	0	0	0	multi-exon	TRUE	canonical	3	83	junction_1	19.7550332287364	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAGGAGAATCACTTGAAC	-35	True	NA	NA	False	NA	NA	NA	10026413	10099660	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_10026474_10028624_10028722_10032831_10032973_10034468_10034537_10034694_10034799_10035172_10035234_10036286_10036340_10039278_10039358_10039720_10039846_10041622_10041711_10042558_10042664_10043049_10043151_10043483_10043593_10043828_10043865_10046579_10046724_10047916_10048052_10049373_10049506_10052386_10052498_10060293_10060404_10062150_10062212_10063791_10063912_10064355_10064430_10064728_10064876_10065393_10065495_10065863_10065980_10067208_10067318_10072870_10072982_10073252_10073363_10074529_10074674_10078080_10078198_10081099_10081229_10081345_10081465_10085811_10085923_10087133_10087265_10088448_10088543_10088827_10088951_10090291_10090386_10092180_10092253_10093284_10093324_10094288_10094364_10095199_10095275_10096325_10096473_10098719
H1_mix_00060908	chr3	+	5119	44	FSM	ENSG00000144554.13	ENST00000675286.1	5096	44	-23	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	20.9290955763533	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGTTGCCTCATTTATC	-35	True	NA	22	True	AATAAA	-18	NA	10026413	10101932	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_10026474_10028624_10028722_10032831_10032973_10034468_10034537_10034694_10034799_10035172_10035234_10036286_10036340_10039278_10039358_10039720_10039846_10041622_10041711_10042558_10042664_10043049_10043151_10043483_10043593_10043828_10043865_10046579_10046724_10047916_10048052_10049373_10049506_10052386_10052498_10060293_10060404_10062150_10062212_10063791_10063912_10064355_10064430_10064728_10064876_10065393_10065495_10065863_10065980_10067208_10067318_10072870_10072982_10073252_10073363_10074529_10074674_10078080_10078198_10081099_10081229_10081345_10081465_10085811_10085923_10087133_10087265_10088448_10088543_10088827_10088951_10090291_10090386_10092180_10092253_10093284_10093324_10094288_10094364_10095199_10095275_10096325_10096473_10098719_10098816_10101187
H1_mix_00060909	chr3	+	4298	43	NIC	ENSG00000144554.13	novel	5096	44	NA	NA	-2	-6	combination_of_known_splicesites	TRUE	canonical	0	0	junction_14	27.9064784942514	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGCCTGCTTCTGTGTCTC	-14	True	NA	8	True	GATAAA	-3	NA	10026434	10101276	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_10026474_10028624_10028722_10032831_10032973_10034468_10034537_10034694_10034799_10035172_10035234_10036286_10036340_10039278_10039358_10039720_10039846_10041622_10041711_10042558_10042664_10043049_10043151_10043483_10043593_10043828_10043865_10047916_10048052_10049373_10049506_10052386_10052498_10060293_10060404_10062150_10062212_10063791_10063912_10064355_10064430_10064728_10064876_10065393_10065495_10065863_10065980_10067208_10067318_10072870_10072982_10073252_10073363_10074529_10074674_10078080_10078198_10081099_10081229_10081345_10081465_10085811_10085923_10087133_10087265_10088448_10088543_10088827_10088951_10090291_10090386_10092180_10092253_10093284_10093324_10094288_10094364_10095199_10095275_10096325_10096473_10098719_10098816_10101187
H1_mix_00060910	chr3	+	5185	44	FSM	ENSG00000144554.13	ENST00000419585.5	5185	44	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	23.989812151705	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTCAGTTGCCTCATTTA	50	False	NA	20	True	AATAAA	-16	NA	10026498	10101930	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_10026627_10028624_10028722_10032831_10032973_10034468_10034537_10034694_10034799_10035172_10035234_10036286_10036340_10039278_10039358_10039720_10039846_10041622_10041711_10042558_10042664_10043049_10043151_10043483_10043593_10043828_10043865_10046579_10046724_10047916_10048052_10049373_10049506_10052386_10052498_10060293_10060404_10062150_10062212_10063791_10063912_10064355_10064430_10064728_10064876_10065393_10065495_10065863_10065980_10067208_10067318_10072870_10072982_10073252_10073363_10074529_10074674_10078080_10078198_10081099_10081229_10081345_10081465_10085811_10085923_10087133_10087265_10088448_10088543_10088827_10088951_10090291_10090386_10092180_10092253_10093284_10093324_10094288_10094364_10095199_10095275_10096325_10096473_10098719_10098816_10101187
H1_mix_00060914	chr3	+	4427	3	FSM	ENSG00000134086.8	ENST00000256474.3	4414	3	-13	0	-13	0	multi-exon	FALSE	canonical	3	75	junction_1	11.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCAGGGTGTGTTGTGTG	-37	True	NA	12	True	ATTAAA	-20	NA	10141764	10153667	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_10142188_10146513_10146637_10149786
H1_mix_00060915	chr3	+	958	3	FSM	ENSG00000134086.8	ENST00000477538.1	958	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	41.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACATCACAAAATGTAATT	640	False	NA	NA	False	AAGAAA	-39	NA	10142545	10150145	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_10143022_10146513_10146637_10149786
H1_mix_00060916	chr3	+	5342	8	FSM	ENSG00000157014.11	ENST00000287652.8	5342	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	13.3706959506258	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCAGTCTCTCCGTGTTT	NA	False	NA	23	True	AATAAA	-19	NA	10248022	10281216	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_10249068_10249194_10249615_10260136_10260671_10270130_10271016_10276360_10276489_10278278_10278463_10278884_10279035_10279220
H1_mix_00060917	chr3	+	4937	8	FSM	ENSG00000157014.11	ENST00000448281.7	4937	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	20.1423505508738	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTCTCTCCGTGTTTGT	-31	True	NA	25	True	AATAAA	-21	NA	10248458	10281218	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_10249068_10249194_10249615_10260136_10260671_10270130_10271016_10276360_10276489_10278278_10278463_10278884_10279064_10279220
H1_mix_00060918	chr3	+	689	4	FSM	ENSG00000157014.11	ENST00000426850.1	689	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	8.5764535535124	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTTGAGTGACATGGT	NA	False	NA	27	True	TATAAA	-24	NA	10270919	10279165	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_10271016_10276360_10276489_10278278_10278463_10278884
H1_mix_00060920	chr3	+	1328	1	FSM	ENSG00000231177.4	ENST00000475197.1	1328	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATACAGTTTGAACATTTA	NA	False	NA	8	True	AATAAA	-19	NA	10284418	10285746	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_10284400_10285700
H1_mix_00060922	chr3	+	635	5	ISM	ENSG00000197548.13	ENST00000435760.6	2618	20	-37	255668	12	230	5prime_fragment	FALSE	canonical	2	4	junction_2	54.0485892507843	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGCTTTTGACATGTGA	NA	False	NA	NA	False	NA	NA	NA	11272359	11299400	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_11272431_11280993_11281103_11282192_11282439_11298685_11298856_11299361
H1_mix_00060923	chr3	+	4993	19	FSM	ENSG00000197548.13	ENST00000354449.7	4959	19	-34	0	0	0	multi-exon	FALSE	canonical	3	78	junction_13	14.6599311133072	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAGTAAGTATTAAGGTTT	4	True	NA	NA	False	AATAAA	-17	NA	11272381	11557665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_11272431_11298685_11298856_11299361_11299417_11306942_11307061_11308983_11309062_11313303_11313421_11315343_11315494_11331339_11331429_11332971_11333094_11340644_11340736_11342134_11342280_11347876_11348036_11358417_11358613_11360580_11360785_11362812_11362929_11364658_11364735_11379971_11380053_11426803_11426927_11554810
H1_mix_00060925	chr3	+	3956	11	FSM	ENSG00000157152.17	ENST00000620175.4	3871	11	12	-97	12	97	multi-exon	FALSE	canonical	3	29	junction_1	4.42831796509691	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACCTTACAGGAGAATGC	30	False	NA	105	True	NA	NA	NA	12004417	12185825	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_12004929_12140650_12140709_12141904_12141997_12145678_12145836_12151236_12151327_12161545_12161609_12162011_12162155_12167233_12167309_12168375_12168479_12169756_12169907_12183311
H1_mix_00060929	chr3	+	2334	12	FSM	ENSG00000154743.19	ENST00000679699.1	2444	12	60	50	1	0	multi-exon	FALSE	canonical	3	61	junction_6	24.3324087525769	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCGGAGATTGTGCCACTG	-13	True	NA	NA	False	NA	NA	NA	12484480	12533603	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
H1_mix_00060930	chr3	+	2168	12	FSM	ENSG00000154743.19	ENST00000402228.7	2149	12	-19	0	-8	0	multi-exon	FALSE	canonical	3	15	junction_1	34.9502598153007	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATGAAGACTTAAGTTGC	-22	True	NA	21	True	AATAAA	-24	NA	12484471	12533317	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_12484629_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
H1_mix_00060931	chr3	+	2760	12	FSM	ENSG00000154743.19	ENST00000284995.11	2753	12	-8	1	-8	-1	multi-exon	FALSE	canonical	3	17	junction_1	34.5234379602473	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	-22	True	NA	NA	False	AATAGA	-14	NA	12484471	12533657	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_12484881_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
H1_mix_00060933	chr3	+	2007	13	FSM	ENSG00000154743.19	ENST00000681482.1	2062	13	25	30	3	5	multi-exon	FALSE	canonical	2	15	junction_12	33.7699529496596	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATGGATTCTTAGTTTA	NA	False	NA	19	True	AATAAA	-21	NA	12484445	12539628	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661_12532774_12539160
H1_mix_00060938	chr3	+	2283	13	FSM	ENSG00000154743.19	ENST00000679425.1	2283	13	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_12	40.1769523483303	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATATGAAAATAATTTTGT	13	False	NA	49	True	TTTAAA	-9	NA	12484562	12539658	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_12484881_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661_12532774_12539160
H1_mix_00060939	chr3	+	1436	7	FSM	ENSG00000075975.17	ENST00000411987.5	1436	7	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	48.0465630635764	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGGTAACAACTAACAAACA	-18	True	NA	62	True	NA	NA	NA	12557086	12582503	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_12557177_12570070_12570253_12572068_12572374_12574791_12575007_12576630_12576742_12581807_12581953_12582115
H1_mix_00060941	chr3	+	5695	9	NNC	ENSG00000075975.17	novel	2775	8	NA	NA	0	613	intron_retention	FALSE	non_canonical	0	0	junction_2	85.7740491057756	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAAAGACCATTTTATTT	-18	True	NA	NA	False	NA	NA	NA	12557086	12586821	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_12557177_12568874_12569004_12570070_12570253_12572068_12572374_12574791_12575007_12576630_12576742_12581807_12581953_12582115_12584661_12584848
H1_mix_00060942	chr3	+	4573	15	FSM	ENSG00000144712.12	ENST00000456430.6	4573	15	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_2	7.85357061651396	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTCCTCTGCACGACT	-10	True	NA	14	True	AATAAA	-18	NA	12796679	12834803	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_12796789_12803487_12803632_12807305_12807461_12808209_12808334_12810058_12810325_12812989_12813096_12813245_12813389_12815140_12815434_12815866_12816009_12816373_12817877_12820085_12820182_12825469_12825640_12827439_12827605_12831464_12831573_12833754
H1_mix_00060946	chr3	+	4057	16	NIC	ENSG00000163520.14	novel	4127	17	NA	NA	-26	1	intron_retention	FALSE	canonical	2	32	junction_8	48.3043131269524	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGGTCCCTTTACTT	-3	True	NA	7	True	TATAAA	-16	NA	13549098	13638405	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_13549209_13570314_13571662_13608061_13608174_13609512_13609643_13613983_13614165_13618075_13618286_13618903_13619018_13619729_13619832_13627831_13627970_13628904_13629049_13629163_13629293_13629819_13629946_13630698_13630816_13631328_13631458_13636444_13636569_13637561
H1_mix_00060947	chr3	+	4196	17	FSM	ENSG00000163520.14	ENST00000295760.11	4127	17	-82	13	-26	2	multi-exon	FALSE	canonical	2	120	junction_1	29.1536875883652	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTCCCTTTACTTTTGT	-3	True	NA	11	True	TATAAA	-20	NA	13549098	13638409	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_13549209_13570314_13571662_13608061_13608174_13609512_13609643_13613983_13614165_13618075_13618286_13618903_13619018_13619729_13619832_13626444_13626580_13627831_13627970_13628904_13629049_13629163_13629293_13629819_13629946_13630698_13630816_13631328_13631458_13636444_13636569_13637561
H1_mix_00060949	chr3	+	906	7	FSM	ENSG00000170876.8	ENST00000432444.1	908	7	2	0	2	0	multi-exon	FALSE	canonical	2	4	junction_2	121.43917087259	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAAAAACCCCAGGTGAGA	-3	True	NA	NA	False	NA	NA	NA	14125016	14132921	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_14125206_14128854_14129086_14129411_14129562_14130821_14130957_14131579_14131675_14132545_14132596_14132865
H1_mix_00060950	chr3	+	3230	12	FSM	ENSG00000170876.8	ENST00000306077.5	3230	12	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_10	17.7703439462196	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGTGTGGGACTTTAAC	-3	True	NA	22	True	AATAAA	-14	NA	14125051	14143680	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_14125206_14129411_14129562_14130821_14130957_14131579_14131675_14132545_14132596_14132865_14132936_14133738_14133810_14134769_14134892_14135157_14135233_14135806_14135909_14139179_14139298_14141592
H1_mix_00060953	chr3	+	1983	11	FSM	ENSG00000131389.18	ENST00000610642.4	1983	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	157.520443117711	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATACAAGATGCAGAGT	-23	True	NA	NA	False	NA	NA	NA	14402575	14478901	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_14402848_14416411_14416454_14443623_14443864_14445716_14445852_14447581_14447817_14457949_14458083_14466515_14466651_14467852_14467957_14472204_14472318_14477204_14477343_14478465
H1_mix_00060956	chr3	+	1266	5	FSM	ENSG00000131389.18	ENST00000621751.4	1252	5	-14	0	0	0	multi-exon	FALSE	canonical	3	487	junction_2	42.8281449516553	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCATATATGAAGCTGAAGT	7	True	NA	108	True	AATATA	-24	NA	14402605	14448188	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_14402848_14416411_14416454_14443623_14443864_14445716_14445852_14447581
H1_mix_00060957	chr3	+	284	3	FSM	ENSG00000131389.18	ENST00000452151.1	284	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	262	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCTGTGGAGCGCGAG	1087	False	NA	NA	False	NA	NA	NA	14472241	14484903	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_14472318_14481670_14481842_14484866
H1_mix_00060962	chr3	+	8418	14	FSM	ENSG00000177463.16	ENST00000425241.6	8419	14	1	0	0	0	multi-exon	FALSE	canonical	3	35	junction_9	13.3983130617033	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCATCCTGCTCTTCATT	-4	True	NA	17	True	ATTAAA	-18	NA	14947583	15049273	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_14947907_15003875_15003987_15013588_15013790_15016151_15016255_15020752_15020933_15023199_15023348_15024114_15024209_15028585_15028720_15030274_15030453_15032378_15032501_15034669_15034810_15037999_15038138_15039121_15039228_15042833
H1_mix_00060967	chr3	+	3531	19	NIC	ENSG00000131375.10	novel	4348	21	NA	NA	13	-2	combination_of_known_splicesites	FALSE	canonical	3	63	junction_14	32.9940604456523	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATATTGCATAGTTTAAGT	11	False	NA	14	True	AATAAA	-15	NA	15206164	15252300	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_15206598_15212103_15212213_15217424_15217583_15218472_15218541_15220780_15220982_15223474_15223562_15227838_15227966_15228973_15229060_15230441_15230536_15232518_15232666_15233866_15233974_15235024_15235146_15240472_15240618_15240753_15240854_15242177_15242254_15246731_15246795_15247326_15247458_15250930_15251024_15251115
H1_mix_00060968	chr3	+	804	4	FSM	ENSG00000131375.10	ENST00000457023.1	854	4	0	50	0	-50	multi-exon	FALSE	canonical	2	4	junction_1	75.0599760191808	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAATAAGTTTACAATTAA	-8	True	NA	NA	False	AATAGA	-10	NA	15206220	15220981	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_15206598_15217424_15217583_15218472_15218541_15220780
H1_mix_00060969	chr3	+	4348	21	FSM	ENSG00000131375.10	ENST00000253693.7	4348	21	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_14	20.8170603111967	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTGTACTTCTTACAAT	17	True	NA	3	True	AATAAA	-13	NA	15206245	15252916	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_15206598_15212103_15212213_15217424_15217583_15218472_15218541_15220780_15220982_15223474_15223562_15227838_15227966_15228973_15229060_15230441_15230536_15232518_15232666_15233866_15233974_15235024_15235146_15240472_15240618_15240753_15240854_15241452_15241589_15242177_15242254_15245525_15245672_15246731_15246795_15247326_15247458_15250930_15251024_15251115
H1_mix_00060970	chr3	+	4197	20	NIC	ENSG00000131375.10	novel	4348	21	NA	NA	12	-3	combination_of_known_junctions	FALSE	canonical	3	63	junction_14	27.9514815092073	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTATTTGTACTTCTTAC	29	True	NA	0	True	AATAAA	-10	NA	15206257	15252913	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_15206598_15212103_15212213_15217424_15217583_15218472_15218541_15220780_15220982_15223474_15223562_15227838_15227966_15228973_15229060_15230441_15230536_15232518_15232666_15233866_15233974_15235024_15235146_15240472_15240618_15240753_15240854_15242177_15242254_15245525_15245672_15246731_15246795_15247326_15247458_15250930_15251024_15251115
H1_mix_00060971	chr3	+	4447	6	FSM	ENSG00000144597.14	ENST00000396842.7	4447	6	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_3	3.70944739819828	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTCTTGGTGGGTTT	5	True	NA	12	True	AATAAA	-20	NA	15427597	15442613	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_15427883_15429912_15430008_15432086_15432224_15434347_15434539_15436341_15436576_15439108
H1_mix_00060973	chr3	+	769	3	FSM	ENSG00000169814.16	ENST00000417015.3	760	3	-9	0	0	0	multi-exon	FALSE	canonical	1	45	junction_2	34.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGGATCTTTCCATTTA	10	False	NA	23	True	ATTAAA	-31	NA	15601735	15642252	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_15601895_15635423_15635689_15641907
H1_mix_00060975	chr3	+	9973	4	FSM	ENSG00000169814.16	ENST00000643237.3	9964	4	-9	0	0	0	multi-exon	FALSE	canonical	1	45	junction_2	28.2174099134244	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATTTGTAAGATAAGGT	10	False	NA	9	True	ATTAAA	-22	NA	15601735	15653714	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_15601895_15635423_15635689_15641907_15642058_15644315
H1_mix_00060979	chr3	+	3946	9	FSM	ENSG00000154814.14	ENST00000627468.2	3983	9	37	0	-5	0	multi-exon	FALSE	canonical	3	23	junction_2	38.6714930536694	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTCTGGCTCTATGAGTT	-18	True	NA	2	True	ATTAAA	-15	NA	16265196	16306086	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_16265506_16269125_16269276_16270928_16271072_16271658_16271723_16286341_16286449_16294855_16294998_16301625_16301869_16302639_16302749_16303407
H1_mix_00060980	chr3	+	3931	9	FSM	ENSG00000154814.14	ENST00000285083.10	3916	9	-15	0	-5	0	multi-exon	FALSE	canonical	3	123	junction_4	9.39331544237709	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGGCTCTATGAGTTT	-18	True	NA	3	True	ATTAAA	-16	NA	16265196	16306087	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_16265506_16269125_16269276_16270944_16271072_16271658_16271723_16286341_16286449_16294855_16294998_16301625_16301869_16302639_16302749_16303407
H1_mix_00060982	chr3	+	2252	10	NNC	ENSG00000154814.14	novel	1681	10	NA	NA	0	14224	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_9	40.4612297281127	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCATGTTGCTGATTAAA	17	True	NA	-36	True	NA	NA	NA	16265231	16320311	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_16265506_16269125_16269276_16270944_16271072_16271658_16271723_16286341_16286449_16294855_16294998_16301625_16301869_16302639_16302749_16303407_16303593_16319460
H1_mix_00060984	chr3	+	4572	7	NNC	ENSG00000154822.18	novel	4161	6	NA	NA	-700	-4	intron_retention	FALSE	canonical	3	19	junction_1	16.224980739588	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATAGCAGTACATGTGTT	NA	False	NA	20	True	ATTAAA	-22	NA	16884254	17090600	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_16884537_16884821_16885367_17009673_17012161_17014707_17014912_17042873_17042950_17067955_17068066_17089732
H1_mix_00060985	chr3	+	4161	6	FSM	ENSG00000154822.18	ENST00000615277.5	4161	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_4	5.49909083394701	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAGTACATGTGTTTAAT	-4	True	NA	24	True	ATTAAA	-26	NA	16884954	17090604	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_16885367_17009673_17012161_17014707_17014912_17042873_17042950_17067955_17068066_17089732
H1_mix_00060987	chr3	+	363	1	FSM	ENSG00000271841.1	ENST00000607194.1	63	1	-302	2	-302	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CGCTATTTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	17664660	17665023	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_17664700_17665000
H1_mix_00060998	chr3	+	2715	6	FSM	ENSG00000182247.10	ENST00000396703.6	2715	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	209.077593251883	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGGAAAGTTGCTCAGA	9	True	NA	6	True	AATAAA	-22	NA	23203326	23591794	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_23203465_23208691_23208876_23217261_23217313_23499607_23499741_23532553_23532702_23589733
H1_mix_00061002	chr3	+	1224	5	FSM	ENSG00000170142.12	ENST00000424381.5	1224	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	44.6507278776058	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCTGTGTTCATTTACT	-6	True	NA	22	True	AATAAA	-25	NA	23810442	23891314	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_23810529_23811459_23811511_23887566_23887700_23889111_23889260_23890508
H1_mix_00061005	chr3	+	2155	4	FSM	ENSG00000174748.22	ENST00000307839.10	2155	4	0	0	0	0	multi-exon	FALSE	canonical	3	11634	junction_1	5133.87263400858	4046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTTGATCATTGCATGA	1	True	NA	23	True	CATAAA	-18	NA	23917131	23920989	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_23917174_23917849_23918032_23918439_23918577_23919195
H1_mix_00061006	chr3	+	580	4	FSM	ENSG00000174748.22	ENST00000644684.1	564	4	-16	0	0	0	multi-exon	FALSE	canonical	3	467	junction_1	10394.8034453118	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTAGGACAGTCATGTCT	1	True	NA	13	True	AATAAA	-2	NA	23917131	23919537	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_23917174_23917972_23918032_23918439_23918577_23919195
H1_mix_00061007	chr3	+	840	4	FSM	ENSG00000174748.22	ENST00000644185.1	824	4	-16	0	0	0	multi-exon	FALSE	canonical	3	1105	junction_1	10094.1415792638	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGCTTACAGGTGTTAT	1	True	NA	28	True	AATAAA	-17	NA	23917131	23919552	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_23917296_23917849_23918032_23918439_23918577_23919195
H1_mix_00061008	chr3	+	621	4	FSM	ENSG00000174748.22	ENST00000436146.2	605	4	-16	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	10513.5616546757	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGCTTACAGGTGTTAT	1	True	NA	28	True	AATAAA	-17	NA	23917131	23919552	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_23917174_23917946_23918032_23918439_23918577_23919195
H1_mix_00061009	chr3	+	1745	2	FSM	ENSG00000174748.22	ENST00000465786.1	1729	2	-16	0	0	0	multi-exon	FALSE	canonical	3	11634	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGCTTACAGGTGTTAT	1	True	NA	28	True	AATAAA	-17	NA	23917131	23919552	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_23917174_23917849
H1_mix_00061010	chr3	+	2221	4	FSM	ENSG00000174748.22	ENST00000413699.7	2221	4	0	0	0	0	multi-exon	FALSE	canonical	3	2379	junction_1	9493.77821991271	2712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTTGATCATTGCATGA	1	True	NA	23	True	CATAAA	-18	NA	23917131	23920989	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_23917240_23917849_23918032_23918439_23918577_23919195
H1_mix_00061011	chr3	+	2005	5	FSM	ENSG00000174748.22	ENST00000456530.7	3182	5	-7	1184	0	-1184	multi-exon	FALSE	canonical	1	2	junction_4	9307.32444099807	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCTTTATCAGCTCATG	1	True	NA	NA	False	NA	NA	NA	23917131	23923190	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_23917174_23917849_23918032_23918439_23918577_23919195_23919247_23921597
H1_mix_00061012	chr3	+	820	3	FSM	ENSG00000174748.22	ENST00000354811.5	820	3	0	0	0	0	multi-exon	FALSE	canonical	3	22197	junction_2	314	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTGCTTACAGGTGTTA	-17	True	NA	27	True	AATAAA	-16	NA	23917704	23919551	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_23918032_23918439_23918577_23919195
H1_mix_00061024	chr3	+	707	5	FSM	ENSG00000187118.14	ENST00000418849.2	670	5	-40	3	0	0	multi-exon	FALSE	canonical	3	38	junction_1	321.121083082379	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTTTGGTTTCTTAAAT	-44	True	NA	12	True	AATAAA	-12	NA	28241583	28319770	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_28241813_28253730_28253766_28263290_28263381_28316332_28316424_28319508
H1_mix_00061025	chr3	+	537	4	FSM	ENSG00000187118.14	ENST00000467644.5	549	4	12	0	12	0	multi-exon	FALSE	canonical	2	3	junction_1	365.121288828186	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGTTTCTTAAATGGG	5261	False	NA	15	True	AATAAA	-15	NA	28297112	28319773	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_28297162_28298218_28298351_28316332_28316424_28319508
H1_mix_00061027	chr3	+	413	4	FSM	ENSG00000144642.22	ENST00000497205.1	413	4	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_3	3.39934634239519	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAATTCCATTCCTTTT	NA	False	NA	NA	False	NA	NA	NA	29434856	29739922	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_29434916_29488440_29488500_29587113_29587206_29739719
H1_mix_00061033	chr3	+	483	1	FSM	ENSG00000235670.1	ENST00000428586.1	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGGTGTTAAAAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	32030195	32030678	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_32030200_32030700
H1_mix_00061039	chr3	+	1856	5	FSM	ENSG00000153551.14	ENST00000334983.10	1856	5	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_3	66.027929696455	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCAGCACCCGTGGTGT	-1	True	NA	NA	False	NA	NA	NA	32391852	32455528	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_32392066_32441839_32442014_32449453_32449553_32452391_32452474_32454240
H1_mix_00061041	chr3	+	2066	2	FSM	ENSG00000153551.14	ENST00000464689.1	2066	2	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTTGCACAAGGATTTCT	NA	False	NA	12	True	AATAAA	-13	NA	32451002	32454835	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_32452474_32454240
H1_mix_00061042	chr3	+	2815	19	FSM	ENSG00000182973.20	ENST00000328834.10	2772	19	-43	0	0	0	multi-exon	FALSE	canonical	3	272	junction_12	36.650206743223	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTTACACTTTTATTGA	7	True	NA	17	True	ATTAAA	-18	NA	32685144	32773875	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_32685483_32703867_32703963_32704810_32704973_32708669_32708821_32713226_32713370_32716224_32716312_32717153_32717238_32720113_32720232_32725449_32725600_32727667_32727871_32733422_32733545_32734799_32734977_32737409_32737491_32759457_32759572_32762732_32762864_32764454_32764491_32764681_32764810_32769886_32769963_32773456
H1_mix_00061050	chr3	+	2821	2	Intergenic	novelGene_884	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	40	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTTTGTCTTGTTTTTT	NA	False	NA	9	True	AATAGA	-21	NA	33446587	33455306	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_33447138_33453035
H1_mix_00061054	chr3	+	3068	11	FSM	ENSG00000144681.11	ENST00000273183.8	3067	11	-1	0	0	0	multi-exon	FALSE	canonical	3	41	junction_10	6.96060342211794	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTCCTGATCTCTTCT	-9	True	NA	27	True	AATAAA	-34	NA	36380502	36548007	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_36380755_36443363_36443641_36482991_36483093_36484976_36485059_36486133_36486250_36493150_36493230_36504392_36504458_36505745_36505835_36528695_36528748_36528847_36528986_36546190
H1_mix_00061057	chr3	+	2517	19	FSM	ENSG00000076242.16	ENST00000231790.8	2494	19	-23	0	0	0	multi-exon	FALSE	canonical	3	254	junction_11	29.8331264217944	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTATTTAATTTTATTA	-18	True	NA	31	True	AATAAA	-20	NA	36993494	37050846	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_36993664_36996618_36996710_37000954_37001054_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37014431_37014545_37017505_37017600_37020309_37020464_37025636_37026008_37028783_37028933_37040185_37040295_37042267_37042332_37047518_37047684_37048516_37048610_37048903_37049018_37050485
H1_mix_00061058	chr3	+	2309	19	FSM	ENSG00000076242.16	ENST00000455445.6	2296	19	-13	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	72.4013164057391	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTGTTGTATCAAAGTG	1	True	NA	NA	False	NA	NA	NA	36993784	37050706	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_36993891_36996623_36996710_37000954_37001054_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37014431_37014545_37017505_37017600_37020309_37020464_37025636_37026008_37028783_37028933_37040185_37040295_37042267_37042332_37047518_37047684_37048516_37048610_37048903_37049018_37050485
H1_mix_00061060	chr3	+	2183	17	FSM	ENSG00000076242.16	ENST00000413212.2	2183	17	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	98.3773824362084	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATAGATGTGTCTTAACA	1	True	NA	8	True	TATAAA	-1	NA	36993784	37050823	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_36993891_36996618_36996710_37000954_37001054_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37014431_37014545_37025636_37026008_37028783_37028933_37040185_37040295_37042267_37042332_37047518_37047684_37048516_37048610_37048903_37049018_37050485
H1_mix_00061061	chr3	+	1495	4	FSM	ENSG00000076242.16	ENST00000673741.1	1495	4	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_1	21.7408984788271	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTCTTATTTAATTTTA	NA	False	NA	28	True	AATAAA	-17	NA	37046753	37050843	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_37047684_37048516_37048610_37048903_37049018_37050485
H1_mix_00061062	chr3	+	495	1	FSM	ENSG00000225558.1	ENST00000424409.1	445	1	11	-61	11	61	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAAAAAAGGCTG	NA	False	NA	-9	True	AATAAA	-15	NA	37134668	37135163	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_37134700_37135200
H1_mix_00061065	chr3	+	7757	25	NIC	ENSG00000144674.17	novel	7806	24	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	86	junction_2	61.9350998806188	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACATTTGTTTATTGTAC	4	True	NA	6	True	AATAAA	-14	NA	37243251	37366745	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_37243623_37251394_37251485_37273535_37273602_37281957_37282273_37286013_37286062_37289234_37289292_37294978_37295078_37296086_37296220_37298832_37299021_37299287_37299372_37302184_37302333_37315419_37315599_37319062_37319195_37321730_37321887_37323587_37327826_37328415_37328538_37328962_37329094_37335052_37335167_37337142_37337164_37337665_37337735_37340123_37340200_37347192_37347297_37355100_37355188_37361242_37361306_37366079
H1_mix_00061066	chr3	+	7623	23	NIC	ENSG00000144674.17	novel	7806	24	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	69.9330405837559	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAACATTTGTTTATTGTA	23	True	NA	5	True	AATAAA	-13	NA	37243270	37366744	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_37243623_37251394_37251485_37281957_37282273_37289234_37289292_37294978_37295078_37296086_37296220_37298832_37299021_37299287_37299372_37302184_37302333_37315419_37315599_37319062_37319195_37321730_37321887_37323587_37327826_37328415_37328538_37328962_37329094_37335052_37335167_37337142_37337164_37337665_37337735_37340123_37340200_37347192_37347297_37355100_37355188_37361242_37361306_37366079
H1_mix_00061069	chr3	+	6947	21	FSM	ENSG00000144674.17	ENST00000437131.1	6947	21	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_20	68.8623808766441	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTTTATTGTACTTGTT	66	False	NA	11	True	AATAAA	-19	NA	37282182	37366750	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_37282273_37286013_37286062_37289234_37289292_37294978_37295078_37296086_37296220_37298832_37299021_37299287_37299372_37302184_37302333_37315419_37315599_37319062_37319195_37321730_37321887_37323587_37327826_37328415_37328538_37328962_37329094_37335052_37335167_37337142_37337164_37337665_37337735_37340123_37340200_37347192_37347297_37355100_37355188_37366079
H1_mix_00061070	chr3	+	7860	28	FSM	ENSG00000144668.12	ENST00000264741.10	7860	28	0	0	0	0	multi-exon	TRUE	canonical	3	89	junction_12	16.2370133819779	200	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGAAGTTCAATCTGTAA	0	True	NA	14	True	AATAAA	-17	NA	37452140	37823507	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_37452560_37471006_37471135_37473353_37473461_37481483_37481608_37494500_37494569_37503177_37503308_37505999_37506086_37508558_37508628_37513762_37513901_37517503_37517610_37519259_37519355_37523520_37523612_37526025_37526072_37533313_37533469_37542424_37542586_37629186_37629337_37653713_37653791_37683864_37684016_37732711_37732799_37736903_37736984_37741729_37741820_37743925_37744035_37750461_37750570_37777391_37777518_37779901_37780022_37784976_37785079_37803822_37803943_37818890
H1_mix_00061071	chr3	+	4754	8	FSM	ENSG00000144677.15	ENST00000273179.10	4753	8	-1	0	-1	0	multi-exon	FALSE	canonical	3	62	junction_3	43.1367072248692	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTGTGGATTGACTAC	-8	True	NA	19	True	AATAAA	-15	NA	37861878	37984469	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_37862279_37947056_37947212_37957110_37957144_37964570_37964673_37967825_37967883_37971406_37971500_37975708_37975895_37980741
H1_mix_00061081	chr3	+	3314	2	FSM	ENSG00000172936.16	ENST00000484513.1	3314	2	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTGTGTGTGTTGAG	759	False	NA	5	True	AATAAA	-17	NA	38139422	38143019	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_38140849_38141131
H1_mix_00061083	chr3	+	4517	18	FSM	ENSG00000172939.9	ENST00000311806.8	4517	18	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_7	30.6986694255349	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTGGTGTATGGACGCT	-11	True	NA	NA	False	AATAAA	-13	NA	38165536	38255484	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_38165947_38183002_38183116_38190730_38190840_38198721_38198864_38216095_38216152_38221577_38221688_38223811_38223914_38224570_38224705_38229686_38229736_38230364_38230431_38236838_38236962_38242742_38242779_38246074_38246222_38247667_38247733_38249965_38250019_38251402_38251472_38252327_38252393_38252816
H1_mix_00061085	chr3	+	526	4	ISM	ENSG00000093217.11	ENST00000649234.1	2106	20	-24	50115	6	6016	5prime_fragment	FALSE	canonical	3	21	junction_3	3.55902608401044	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGGAGACTGTATAACTT	-23	True	NA	NA	False	AATAAA	-20	NA	38346790	38363174	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_38346926_38348549_38348633_38360338_38360409_38362936
H1_mix_00061088	chr3	+	4156	2	NNC	ENSG00000114739.14	novel	11782	11	NA	NA	15501	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTCTTTCTTAATTACG	3251	False	NA	9	True	AATAAA	-16	NA	38488946	38493142	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_38492732_38492771
H1_mix_00061092	chr3	+	4142	4	FSM	ENSG00000157036.13	ENST00000483749.1	871	4	-1210	-2061	-1210	4	multi-exon	FALSE	canonical	3	54	junction_2	2.94392028877595	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTCTGCTCTTTTATT	3468	False	NA	10	True	GATAAA	-21	NA	38499951	38526307	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_38501495_38503614_38503692_38506853_38506969_38523900
H1_mix_00061094	chr3	+	4048	20	NNC	ENSG00000114742.14	novel	3965	19	NA	NA	1	0	intron_retention	TRUE	canonical	0	0	junction_15	97.1867437354228	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAAAGTGTAGTACACAT	11	True	NA	17	True	AATAAA	-17	NA	39052020	39096664	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_39052074_39063049_39063191_39065810_39065890_39066547_39066631_39066745_39066876_39068770_39068860_39069642_39069745_39074725_39074951_39077138_39077214_39078136_39078240_39079710_39079809_39084154_39084263_39084644_39084742_39085514_39085611_39086300_39086389_39088127_39088234_39089230_39089319_39091624_39091702_39093873_39094067_39094647
H1_mix_00061095	chr3	+	4198	19	NIC	ENSG00000114742.14	novel	949	8	NA	NA	10	0	intron_retention	FALSE	canonical	2	9	junction_1	75.608090396024	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAAAGTGTAGTACACAT	301	False	NA	17	True	AATAAA	-17	NA	39052310	39096664	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_39052602_39063049_39063191_39065810_39065890_39066547_39066631_39066745_39066876_39068770_39068860_39069642_39069745_39074725_39074951_39077138_39077214_39078136_39078240_39079710_39079809_39084154_39084263_39084644_39084742_39085514_39085611_39088127_39088234_39089230_39089319_39091624_39091702_39093873_39094067_39094647
H1_mix_00061107	chr3	+	1036	7	NNC	ENSG00000168028.14	novel	1140	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	212	junction_3	1995.98286148287	990	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTTCATTTAGTTTGC	-3	True	NA	6	True	AATAAA	-16	NA	39406717	39412438	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_39406765_39407620_39407787_39408605_39408725_39410755_39411000_39411648_39411778_39411895_39412062_39412273
H1_mix_00061108	chr3	+	1227	5	FSM	ENSG00000168028.14	ENST00000478027.2	1227	5	0	0	0	0	multi-exon	FALSE	canonical	3	5185	junction_1	301.63429844764	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTTCATTTAGTTTGC	1171	False	NA	6	True	AATAAA	-16	NA	39408203	39412438	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_39408725_39410753_39411000_39411648_39411778_39411895_39412062_39412273
H1_mix_00061109	chr3	+	2058	2	FSM	ENSG00000168028.14	ENST00000495394.1	2058	2	0	0	0	0	multi-exon	FALSE	canonical	3	5475	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTGTCTTCATTTAGT	1050	False	NA	2	True	AATAAA	-12	NA	39410258	39412434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_39411778_39411895
H1_mix_00061115	chr3	+	990	6	FSM	ENSG00000188846.14	ENST00000435633.5	966	6	-24	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	1641.75471980439	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGGTCAAAAAGCTCCAG	2	True	NA	NA	False	NA	NA	NA	40457338	40462168	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_40457748_40457889_40457992_40458641_40458737_40461406_40461507_40461607_40461662_40461938
H1_mix_00061116	chr3	+	795	5	FSM	ENSG00000188846.14	ENST00000479563.5	794	5	-1	0	-1	0	multi-exon	FALSE	canonical	3	3747	junction_3	246.360888738452	2048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCCTTTTTTTTTTTTTTT	539	False	NA	14	True	AATAAA	-14	NA	40457875	40462368	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_40457992_40458641_40458737_40461406_40461507_40461607_40461662_40461938
H1_mix_00061117	chr3	+	4074	6	FSM	ENSG00000177873.14	ENST00000429348.6	4104	6	30	0	1	0	multi-exon	FALSE	canonical	3	4	junction_4	5.54977477020464	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGTCTATGGTATTCAG	2	True	NA	NA	False	AATAAA	-20	NA	40477142	40490236	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_40477358_40477917_40478004_40481862_40482017_40482587_40482705_40483652_40483724_40486805
H1_mix_00061118	chr3	+	4836	5	FSM	ENSG00000177873.14	ENST00000432264.4	4841	5	2	3	2	-3	multi-exon	FALSE	canonical	3	9	junction_3	4.60977222864644	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCCAATCTGTGATATTC	-17	True	NA	NA	False	AATAAA	-18	NA	40477123	40491050	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_40477358_40477917_40478004_40481862_40482017_40482587_40482705_40486805
H1_mix_00061127	chr3	+	5042	16	FSM	ENSG00000168036.18	ENST00000396183.7	3268	16	-2332	558	-1543	0	multi-exon	FALSE	canonical	3	436	junction_15	129.769642058534	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGAATTTATCAAACCCT	263	False	NA	NA	False	NA	NA	NA	41197101	41239885	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_41199671_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133_41239355_41239818
H1_mix_00061128	chr3	+	3282	16	FSM	ENSG00000168036.18	ENST00000643031.1	3267	16	-15	0	0	0	multi-exon	FALSE	canonical	3	24	junction_15	226.878371722726	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCACTCTTTCTTTTT	89	False	NA	32	True	ATTAAA	-17	NA	41199418	41240445	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_41199671_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133_41239355_41239821
H1_mix_00061131	chr3	+	3666	15	FSM	ENSG00000168036.18	ENST00000349496.11	3661	15	-5	0	0	0	multi-exon	FALSE	canonical	3	829	junction_8	57.8591269501068	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTGTCACTCTTTCTTT	-5	True	NA	30	True	ATTAAA	-15	NA	41199499	41240443	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_41199671_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133
H1_mix_00061137	chr3	+	4610	13	FSM	ENSG00000182606.17	ENST00000341421.7	4620	13	10	0	10	0	multi-exon	FALSE	canonical	3	47	junction_1	38.508566867935	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGATTATAGTTTTACTTT	10	False	NA	NA	False	ATTAAA	-20	NA	42160178	42212623	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_42160474_42176813_42176891_42184684_42184802_42188044_42188146_42189015_42189125_42191557_42191637_42193074_42193206_42193823_42193899_42194803_42194942_42199176_42199254_42200817_42201055_42202435_42202753_42209766
H1_mix_00061138	chr3	+	4847	15	NNC	ENSG00000182606.17	novel	5033	15	NA	NA	10	-113	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_1	38.5388751517112	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTATTCTGATTTGTATT	10	False	NA	22	True	AATAAA	-26	NA	42160178	42225776	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_42160474_42176813_42176891_42184684_42184802_42188044_42188146_42189015_42189125_42191557_42191637_42193074_42193206_42193823_42193899_42194803_42194942_42199176_42199254_42200817_42201055_42202435_42202753_42209766_42209923_42219493_42219597_42222941
H1_mix_00061141	chr3	+	590	2	FSM	ENSG00000114812.13	ENST00000495189.1	590	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTACTTCTGGGGGTACA	NA	False	NA	NA	False	NA	NA	NA	42527652	42530897	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_42528124_42530778
H1_mix_00061144	chr3	+	2650	3	FSM	ENSG00000008324.12	ENST00000011691.6	2697	3	0	47	0	-47	multi-exon	FALSE	canonical	3	1048	junction_1	65.5	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTAAGTATATCCCAAAT	-19	True	NA	NA	False	AATGAA	-16	NA	42590859	42596887	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_42590967_42591524_42591602_42594421
H1_mix_00061149	chr3	+	7269	17	FSM	ENSG00000114857.19	ENST00000232978.13	7265	17	-4	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	46.8814578884872	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGAGTCTGTTCATGTTT	4	True	NA	15	True	ATTAAA	-18	NA	42600681	42648735	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_42600779_42600983_42601065_42617569_42617645_42619019_42619128_42619663_42619709_42621428_42621517_42630545_42630576_42631170_42631317_42632600_42632824_42633579_42633736_42634612_42634701_42635220_42635367_42636867_42639751_42642500_42642597_42643338_42643396_42643901_42644004_42645887
H1_mix_00061164	chr3	+	5298	7	FSM	ENSG00000011198.10	ENST00000644371.2	5298	7	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_5	17.7200451466693	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTAGTTTTATTTTTAG	1	True	NA	2	True	AATAAA	-13	NA	43690937	43722725	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_43691040_43699275_43699362_43702214_43702588_43711708_43711864_43714946_43715059_43717670_43717858_43718442
H1_mix_00061167	chr3	+	2003	4	FSM	ENSG00000179152.20	ENST00000383746.7	1998	4	-8	3	-8	-1	multi-exon	FALSE	canonical	3	31	junction_3	20.757863302587	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTCTGAGTTCTGTGA	NA	False	NA	8	True	AATAAA	-20	NA	44338110	44359801	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_44338320_44354738_44354812_44357740_44357877_44358216
H1_mix_00061169	chr3	+	3400	11	NIC	ENSG00000179152.20	novel	1844	11	NA	NA	23	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_4	13.2875881934985	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTTTTTTTCTTGTTA	9	True	NA	6	True	AATAAA	-17	NA	44338144	44409448	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_44338320_44354738_44354812_44357740_44357877_44361364_44361519_44367531_44367709_44392854_44392978_44396399_44396498_44396742_44396835_44400354_44400588_44401202_44401335_44407441
H1_mix_00061170	chr3	+	2183	4	FSM	ENSG00000179152.20	ENST00000396078.7	2178	4	-7	2	-7	-2	multi-exon	FALSE	canonical	3	31	junction_3	22.2910046630673	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTGTCTGAGTTCTGTG	0	True	NA	7	True	AATAAA	-19	NA	44338444	44359800	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_44338835_44354738_44354812_44357740_44357877_44358216
H1_mix_00061171	chr3	+	1429	5	FSM	ENSG00000179152.20	ENST00000444602.2	1056	5	-315	-58	-7	58	multi-exon	FALSE	canonical	3	7	junction_4	26.3853652618265	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTTCTGCTACCACTCT	0	True	NA	65	True	NA	NA	NA	44338444	44363095	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_44338835_44354738_44354812_44357740_44357877_44361364_44361519_44362419
H1_mix_00061176	chr3	+	540	3	FSM	ENSG00000186448.15	ENST00000412641.1	546	3	6	0	6	0	multi-exon	FALSE	canonical	3	18	junction_2	9	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGATCCTGGAGCTGCTGG	12	True	NA	NA	False	NA	NA	NA	44584893	44629390	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_44585008_44586104_44586214_44629073
H1_mix_00061179	chr3	+	7549	6	FSM	ENSG00000186448.15	ENST00000344387.9	7530	6	-19	0	-2	0	multi-exon	FALSE	canonical	3	24	junction_1	9.71596624119289	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGGCTTTCTACAGATTA	-1	True	NA	9	True	AATAAA	-19	NA	44625016	44648471	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_44625144_44629073_44629545_44631061_44631222_44632104_44632197_44632472_44632600_44641899
H1_mix_00061180	chr3	+	2755	4	FSM	ENSG00000169981.11	ENST00000396056.7	2658	4	-4	-93	-4	93	multi-exon	FALSE	canonical	3	28	junction_2	5.31245915016974	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCTTCTCATTCTGAGAA	-20	True	NA	116	True	AAGAAA	-7	NA	44648727	44660884	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_44648835_44650940_44651260_44652556_44652702_44658700
H1_mix_00061182	chr3	+	3858	3	FSM	ENSG00000186446.12	ENST00000396048.6	3099	3	12	-771	12	771	multi-exon	FALSE	canonical	3	20	junction_1	3.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATCAAAATATCTCATTT	-27	True	NA	NA	False	AATGAA	-42	NA	44729607	44737854	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_44729723_44731475_44731561_44734196
H1_mix_00061183	chr3	+	3358	3	FSM	ENSG00000186446.12	ENST00000620116.5	3353	3	-5	0	-5	0	multi-exon	FALSE	canonical	3	10	junction_1	8.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGTGTGTCATTGTCTT	-5	True	NA	7	True	AATAAA	-19	NA	44729629	44737083	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_44730016_44731475_44731561_44734196
H1_mix_00061184	chr3	+	4780	35	FSM	ENSG00000163808.17	ENST00000326047.9	4760	35	-20	0	-20	0	multi-exon	FALSE	canonical	3	134	junction_21	24.0970679776837	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGTGACTTACATTGTT	-14	True	NA	10	True	AATAAA	-21	NA	44761773	44853256	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_44761885_44774394_44774438_44775253_44775438_44778114_44778192_44780884_44780923_44784844_44784943_44786394_44786575_44794216_44794427_44797550_44797677_44797833_44797957_44800313_44800438_44801449_44801527_44801764_44801975_44802813_44802992_44805026_44805169_44805844_44805987_44810845_44811044_44812181_44812290_44813074_44813181_44814910_44815077_44826038_44826190_44826374_44826461_44827458_44827529_44828213_44828301_44829970_44830076_44830895_44831019_44838274_44838422_44840354_44840457_44841073_44841239_44843124_44843235_44847984_44848058_44848520_44848559_44851786_44851953_44852207_44852340_44852672
H1_mix_00061185	chr3	+	4742	34	FSM	ENSG00000163808.17	ENST00000438321.5	4795	34	53	0	-20	0	multi-exon	FALSE	canonical	1	1	junction_1	39.2390661953892	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTTACATTGTTCATTC	-14	True	NA	15	True	AATAAA	-26	NA	44761773	44853261	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_44761885_44775253_44775438_44778114_44778192_44780884_44780923_44784844_44784943_44786394_44786575_44794216_44794427_44797550_44797677_44797833_44797957_44800313_44800438_44801449_44801527_44801764_44801975_44802813_44802992_44805026_44805169_44805844_44805987_44810845_44811044_44812181_44812290_44813074_44813181_44814910_44815077_44826038_44826190_44826374_44826461_44827458_44827529_44828213_44828301_44829970_44830076_44830895_44831019_44838274_44838422_44840354_44840457_44841073_44841239_44843124_44843235_44847984_44848058_44848520_44848559_44851786_44851953_44852207_44852340_44852672
H1_mix_00061189	chr3	+	795	3	NNC	ENSG00000169964.8	novel	977	3	NA	NA	-6	0	at_least_one_novel_splicesite	TRUE	canonical	2	16	junction_2	1.5	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCAGGTACGGTATCTTA	-4	True	NA	22	True	AATAAA	-22	NA	44861897	44865664	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_44862016_44864196_44864344_44865134
H1_mix_00061190	chr3	+	2126	4	NNC	ENSG00000169964.8	novel	977	3	NA	NA	-971	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	40.8275506109403	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCAGGTACGGTATCTTA	NA	False	NA	22	True	AATAAA	-22	NA	44860932	44865664	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_44862117_44862357_44862528_44864196_44864344_44865039
H1_mix_00061192	chr3	+	1079	8	FSM	ENSG00000075914.13	ENST00000265564.8	1042	8	-37	0	-37	0	multi-exon	FALSE	canonical	3	876	junction_3	84.9196498978623	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGGTATGTCTAGAGT	922	False	NA	8	True	ATTAAA	-16	NA	44976206	45011471	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_44976335_44989139_44989242_44989549_44989645_44997086_44997253_45001537_45001609_45005290_45005415_45007419_45007576_45011234
H1_mix_00061193	chr3	+	1485	9	FSM	ENSG00000075914.13	ENST00000491476.5	1395	9	-57	-33	-37	0	multi-exon	FALSE	canonical	3	78	junction_8	315.831343441401	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTGATTCCAGTGGAT	922	False	NA	11	True	AATAAA	-21	NA	44976206	45012666	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_44976335_44989139_44989242_44989549_44989645_44997086_44997253_45001537_45001609_45005290_45005415_45007419_45007576_45011234_45011394_45012182
H1_mix_00061194	chr3	+	1647	3	FSM	ENSG00000075914.13	ENST00000486727.1	1647	3	0	0	0	0	multi-exon	FALSE	canonical	3	1003	junction_2	86	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTTGGTATGTCTAGAG	NA	False	NA	7	True	ATTAAA	-15	NA	45004159	45011470	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_45005415_45007419_45007576_45011234
H1_mix_00061197	chr3	+	10048	21	FSM	ENSG00000011376.12	ENST00000650792.2	10049	21	-15	16	-15	-16	multi-exon	TRUE	canonical	3	23	junction_1	42.2570704143106	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAATCATATGTAATGGC	NA	False	NA	-2	True	AATAAA	-12	NA	45388545	45554710	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_45388681_45394432_45394688_45400244_45400374_45417481_45417574_45419668_45419730_45446890_45446981_45458742_45458887_45474242_45474351_45476467_45476628_45485691_45485797_45488696_45488813_45491516_45491801_45496274_45496374_45500441_45500580_45513134_45513236_45516093_45516277_45517902_45518073_45520218_45520297_45523996_45524109_45541828_45541957_45547350
H1_mix_00061198	chr3	+	7317	8	FSM	ENSG00000144791.10	ENST00000273317.5	11442	8	-953	5078	-526	-5078	multi-exon	FALSE	canonical	3	62	junction_1	12.1032969028429	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCCTGGGTCTTTTCTG	NA	False	NA	NA	False	ATTAAA	-18	NA	45593797	45681263	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_45596288_45636149_45636252_45665649_45665718_45668293_45668357_45672689_45672821_45673453_45673506_45674342_45674412_45676921
H1_mix_00061207	chr3	+	518	2	Antisense	novelGene_ENSG00000163827.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTATTTTGTATTATTTC	NA	False	NA	NA	False	ATTAAA	-16	NA	46546214	46548274	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr3_+_46546550_46548091
H1_mix_00061218	chr3	+	8532	53	FSM	ENSG00000160796.18	ENST00000651747.1	8605	53	73	0	73	0	multi-exon	FALSE	canonical	0	0	junction_1	46.7640906841435	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGTCTCCGAGTGTGCG	35	False	NA	25	True	AATAAA	-21	NA	46988062	47009704	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_46988078_46988668_46988758_46988841_46988971_46989084_46989167_46989259_46989382_46989510_46989594_46991218_46991305_46991405_46991689_46991839_46991947_46993936_46994021_46994454_46994554_46995031_46995634_46995713_46995847_46995931_46996052_46996270_46996593_46996750_46996834_46996953_46997047_46997258_46997434_46997560_46997695_46998066_46998227_46998462_46998566_46998716_46998880_46998958_46999118_46999314_46999475_46999629_46999716_46999888_47000405_47001000_47001180_47001278_47001439_47001688_47001827_47001919_47002289_47002370_47002521_47002644_47002803_47002956_47003082_47003173_47003310_47003815_47003977_47004076_47004394_47004494_47004591_47004971_47005097_47005180_47005322_47005488_47005620_47005737_47005848_47005945_47006064_47006164_47006263_47006332_47006450_47007065_47007156_47007240_47007351_47007524_47007698_47007815_47007911_47008069_47008187_47008282_47008442_47008519_47008669_47008988_47009125_47009218
H1_mix_00061225	chr3	+	4653	10	FSM	ENSG00000114648.12	ENST00000232766.6	4622	10	-31	0	-4	0	multi-exon	FALSE	canonical	3	72	junction_3	11.8613387956289	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGTCCTTTCTTGGTT	-3	True	NA	17	True	AATAAA	-17	NA	47282912	47346816	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_47283095_47319652_47319784_47322567_47322709_47329950_47330150_47333156_47333318_47334682_47334820_47336534_47336758_47340571_47340677_47342718_47342831_47343554
H1_mix_00061227	chr3	+	3208	7	FSM	ENSG00000114648.12	ENST00000461084.5	3206	7	-2	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	13.208793367383	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAAAAGGTAGCA	-2	True	NA	NA	False	NA	NA	NA	47282943	47338822	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_47283095_47319652_47319784_47322567_47322709_47329950_47330150_47333156_47333318_47334682_47334820_47336534
H1_mix_00061232	chr3	+	4078	22	FSM	ENSG00000132153.15	ENST00000445061.6	3855	22	-229	6	0	0	multi-exon	FALSE	canonical	3	210	junction_4	152.745842879624	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGACCACTGCTGTCCAC	3	False	NA	19	True	AATAAA	-15	NA	47802908	47850187	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_47803213_47805325_47805421_47810656_47810712_47818021_47818118_47827346_47827478_47829023_47829135_47840876_47841179_47841616_47841738_47843105_47843256_47845699_47845853_47846164_47847002_47847272_47847349_47847431_47847537_47847780_47847957_47848179_47848387_47848468_47848551_47848623_47848818_47848919_47849080_47849191_47849350_47849450_47849555_47849629_47849770_47849866
H1_mix_00061233	chr3	+	3896	23	FSM	ENSG00000132153.15	ENST00000395745.6	3887	23	-9	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	215.484295030888	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACTGCTGTCCACTAGGG	16	False	NA	24	True	AATAAA	-20	NA	47803124	47850192	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_47803213_47805325_47805421_47810656_47810712_47818021_47818118_47819235_47819265_47827346_47827478_47829023_47829135_47840876_47841179_47841616_47841738_47843105_47843256_47845699_47845853_47846164_47847002_47847272_47847349_47847431_47847537_47847780_47847957_47848179_47848387_47848468_47848551_47848623_47848818_47848919_47849080_47849191_47849350_47849450_47849555_47849629_47849770_47849866
H1_mix_00061234	chr3	+	3574	19	FSM	ENSG00000132153.15	ENST00000619982.4	3574	19	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	159.46887153189	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTGTCCACTAGGGGCT	1175	False	NA	27	True	AATAAA	-23	NA	47819226	47850195	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_47819265_47827346_47827478_47829023_47829135_47840876_47841179_47841616_47841738_47843105_47843256_47845699_47845853_47846164_47847002_47847272_47847349_47847431_47847537_47847780_47847957_47848179_47848387_47848468_47848551_47848623_47848818_47848919_47849080_47849191_47849350_47849450_47849555_47849629_47849770_47849866
H1_mix_00061235	chr3	+	3748	19	FSM	ENSG00000132153.15	ENST00000457607.1	3748	19	0	0	0	0	multi-exon	FALSE	canonical	3	442	junction_1	77.4583320881398	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGACCACTGCTGTCCAC	5	True	NA	19	True	AATAAA	-15	NA	47825027	47850187	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_47825248_47827346_47827478_47829023_47829135_47840876_47841179_47841616_47841738_47843105_47843256_47845699_47845853_47846164_47847002_47847272_47847349_47847431_47847537_47847780_47847957_47848179_47848387_47848468_47848551_47848623_47848818_47848919_47849080_47849191_47849350_47849450_47849555_47849629_47849770_47849866
H1_mix_00061240	chr3	+	1714	4	FSM	ENSG00000164048.14	ENST00000427617.6	1677	4	-37	0	-37	0	multi-exon	FALSE	canonical	3	36	junction_3	185.167191718428	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCATGTTTGTAAGATC	-9	True	NA	NA	False	AATAAA	-26	NA	48241062	48287627	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_48241215_48247624_48247678_48260812_48260940_48286245
H1_mix_00061241	chr3	+	631	4	FSM	ENSG00000164048.14	ENST00000412564.5	593	4	-38	0	-37	0	multi-exon	FALSE	canonical	3	44	junction_3	181.418484908971	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCATCTTTGTATTCCTA	-9	True	NA	28	True	AATAAA	-19	NA	48241062	48299253	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_48241215_48247624_48247678_48260812_48260940_48298954
H1_mix_00061245	chr3	+	2521	12	FSM	ENSG00000164053.22	ENST00000346691.9	2509	12	-12	0	11	0	multi-exon	FALSE	canonical	1	3	junction_10	29.5606953697609	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCTTGTTTCCTGAGTC	6414	False	NA	22	True	ATTAAA	-34	NA	48446720	48465655	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_48447093_48450036_48450171_48451728_48451900_48454299_48454419_48457258_48457417_48459358_48459455_48459786_48459917_48460109_48460800_48463744_48463882_48464040_48464133_48464830_48465084_48465486
H1_mix_00061248	chr3	+	543	2	FSM	ENSG00000177479.20	ENST00000463738.5	528	2	-15	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCCCAAAGTGCCGGGAT	-36	True	NA	NA	False	NA	NA	NA	48918820	48925082	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_48918999_48924717
H1_mix_00061250	chr3	+	5320	17	FSM	ENSG00000177479.20	ENST00000449376.5	2278	17	-10	-3032	3	270	multi-exon	FALSE	canonical	3	224	junction_3	165.665219173338	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCAGGAGCAAAGGACCAC	-31	True	NA	NA	False	NA	NA	NA	48918825	48986652	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_48918999_48922747_48922812_48924717_48924840_48927461_48927814_48961611_48961680_48964918_48964983_48967124_48967276_48968533_48968656_48970594_48970705_48973698_48973817_48974816_48974868_48974957_48974980_48979481_48979634_48980352_48980497_48981659_48981729_48982895_48982980_48983198
H1_mix_00061252	chr3	+	1421	3	ISM	ENSG00000177479.20	ENST00000430423.5	753	6	34	38477	-1	718	5prime_fragment	FALSE	canonical	3	426	junction_2	182	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGGTGTGCCTTGTATGA	-2	True	NA	20	True	AATAAA	-27	NA	48918854	48928674	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_48918999_48922747_48922812_48927461
H1_mix_00061259	chr3	+	4401	6	FSM	ENSG00000178252.19	ENST00000395474.7	4401	6	0	0	0	0	multi-exon	FALSE	canonical	3	535	junction_1	47.2330392839589	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTGTCTATGCCTCACC	NA	False	NA	15	True	AATAAA	-20	NA	49007061	49015953	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_49007532_49011634_49014117_49014209_49014294_49014382_49014500_49014599_49014719_49014824
H1_mix_00061265	chr3	+	2146	3	FSM	ENSG00000145022.5	ENST00000273590.4	1930	3	-217	1	-6	-1	multi-exon	TRUE	canonical	3	39	junction_2	0.5	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGGTTGTTGTGGTTATTC	-6	True	NA	20	True	ATTAAA	-12	NA	49412205	49416475	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_49412641_49413055_49413111_49414819
H1_mix_00061271	chr3	+	5518	3	FSM	ENSG00000173402.12	ENST00000308775.7	5387	3	-135	4	0	-4	multi-exon	FALSE	canonical	3	417	junction_1	90	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACGCCGTTGCATCTGGG	-5	True	NA	11	True	AATAAA	-16	NA	49470131	49535611	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_49470434_49510418_49510820_49530796
H1_mix_00061280	chr3	+	4012	21	FSM	ENSG00000004534.15	ENST00000443081.5	4010	21	-3	1	-3	0	multi-exon	TRUE	canonical	3	47	junction_2	189.283279768711	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTATCTTTTTGTTATTTT	-5	True	NA	15	True	AATAAA	-15	NA	49940037	50077247	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_49940226_49962575_49962686_49967197_49968749_49972058_49972149_49975322_49975393_49999439_49999514_50048244_50048320_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
H1_mix_00061281	chr3	+	2387	19	FSM	ENSG00000004534.15	ENST00000422955.5	2324	19	-64	1	-3	0	multi-exon	FALSE	canonical	3	24	junction_2	202.788584186939	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTATCTTTTTGTTATTTT	-5	True	NA	15	True	AATAAA	-15	NA	49940037	50077247	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_49940226_49962575_49962686_49972058_49972149_49975322_49975393_50048244_50048320_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
H1_mix_00061282	chr3	+	2229	17	FSM	ENSG00000004534.15	ENST00000442092.5	2260	17	31	0	-3	0	multi-exon	FALSE	canonical	3	116	junction_2	168.99767703655	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTTTTTGTTATTTTTT	-5	True	NA	17	True	AATAAA	-17	NA	49940037	50077249	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_49940226_49962575_49962686_50048244_50048320_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
H1_mix_00061283	chr3	+	3730	21	FSM	ENSG00000004534.15	ENST00000266022.9	3630	21	-102	2	7	0	multi-exon	FALSE	canonical	3	224	junction_6	172.657927706781	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTATCTTTTTGTTATTTT	5	True	NA	15	True	AATAAA	-15	NA	49940047	50077247	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_49940226_49962575_49962686_49967469_49968749_49972058_49972149_49975322_49975393_49999439_49999514_50048244_50048320_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
H1_mix_00061284	chr3	+	4324	20	FSM	ENSG00000004534.15	ENST00000454079.5	4324	20	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	194.196690421431	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTATCTTTTTGTTATTTT	-16	True	NA	15	True	AATAAA	-15	NA	49940139	50077247	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_49940226_49962575_49962686_49967197_49968749_49972058_49972149_49975322_49975393_49999439_49999514_50048244_50048320_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
H1_mix_00061285	chr3	+	3561	20	NIC	ENSG00000004534.15	novel	3630	21	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	82	junction_5	183.232229319778	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTATCTTTTTGTTATTTT	-13	True	NA	15	True	AATAAA	-15	NA	49940142	50077247	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_49940226_49962575_49962686_49967469_49968749_49972058_49972149_49975322_49975393_50048244_50048320_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
H1_mix_00061286	chr3	+	3736	21	NNC	ENSG00000004534.15	novel	3630	21	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	200.278406224935	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTTTTTGTTATTTTTT	47	False	NA	17	True	AATAAA	-17	NA	49940202	50077249	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_49940385_49962575_49962686_49967469_49968749_49972058_49972149_49975322_49975393_49999439_49999514_50048244_50048320_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
H1_mix_00061287	chr3	+	2314	17	NIC	ENSG00000004534.15	novel	473	7	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	210.458391077666	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTTTTTGTTATTTTTT	319	False	NA	17	True	AATAAA	-17	NA	49940474	50077249	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_49940748_49962575_49962686_50048244_50048320_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
H1_mix_00061289	chr3	+	684	5	FSM	ENSG00000004534.15	ENST00000421682.1	684	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	306.970173632553	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTTTTTGTTATTTTTT	4806	False	NA	17	True	AATAAA	-17	NA	50066391	50077249	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_50066503_50068689_50068765_50070454_50070553_50075172_50075331_50077007
H1_mix_00061290	chr3	+	2719	5	FSM	ENSG00000003756.17	ENST00000469838.5	2716	5	-3	0	-3	0	multi-exon	TRUE	canonical	3	161	junction_2	25.6356685108854	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCTCCTGTTAAATGAAG	-25	True	NA	NA	False	AAAAAG	-5	NA	50088915	50102194	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_50089030_50090381_50090452_50092042_50092209_50093719_50093876_50099981
H1_mix_00061291	chr3	+	3180	25	FSM	ENSG00000003756.17	ENST00000347869.8	3177	25	-3	0	-3	0	multi-exon	TRUE	canonical	3	125	junction_6	56.3556261363692	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCCTGGTGATGAAATCA	-25	True	NA	86	True	NA	NA	NA	50088915	50119021	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_50089030_50090381_50090452_50092042_50092209_50093719_50093876_50099981_50100052_50100531_50100606_50103082_50103167_50104247_50104309_50105076_50105143_50105548_50105710_50106766_50106865_50107481_50107570_50108069_50108148_50108231_50108305_50109602_50109689_50110378_50110464_50110678_50110771_50113382_50113545_50113949_50114100_50114179_50114252_50115427_50115608_50115905_50115981_50117073_50117172_50117249_50117380_50118330
H1_mix_00061302	chr3	+	1693	11	FSM	ENSG00000001617.12	ENST00000450338.5	1693	11	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_5	32.8170687295499	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAGGACCCCACTCATCC	14	True	NA	NA	False	NA	NA	NA	50155058	50183563	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_50155565_50159574_50159735_50173792_50173954_50174051_50174115_50174230_50174351_50176767_50176862_50182283_50182404_50182643_50182784_50182903_50183019_50183185_50183256_50183419
H1_mix_00061307	chr3	+	2384	9	FSM	ENSG00000114353.17	ENST00000422163.5	2407	9	23	0	23	0	multi-exon	FALSE	canonical	3	42	junction_1	336.170250765888	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAACTGCAAAT	23	False	NA	15	True	AGTAAA	-3	NA	50226314	50258898	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_50227194_50252099_50252143_50252396_50252539_50253023_50253185_50256191_50256321_50256722_50256853_50256936_50257091_50257499_50257715_50258367
H1_mix_00061314	chr3	+	2634	14	FSM	ENSG00000012171.20	ENST00000441915.5	2710	14	76	0	76	0	multi-exon	FALSE	canonical	2	7	junction_6	13.1877655333765	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTCGGCCTTGCTATGTG	1371	False	NA	37	True	AATAAA	-45	NA	50270636	50277170	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_50271010_50271087_50271182_50271360_50271481_50273297_50273444_50273534_50273647_50273758_50273829_50273915_50274058_50274362_50274583_50274842_50274935_50275011_50275054_50275301_50275460_50275559_50275616_50275704_50275845_50276301
H1_mix_00061317	chr3	+	1159	4	FSM	ENSG00000114395.11	ENST00000425346.6	1142	4	-17	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	74.0015014862687	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTGAAAAGATTGATGGG	-21	True	NA	13	True	AGTAAA	-15	NA	50350844	50354069	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_50350985_50351408_50351561_50352008_50352047_50353240
H1_mix_00061329	chr3	+	8987	52	NNC	ENSG00000088538.13	novel	9069	53	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_26	17.6738576472956	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACTGAATTCACTGAATG	-20	True	NA	10	True	ATTAAA	-20	NA	50674926	51384198	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_50675301_50778674_50778759_50841674_50841716_50890025_50890082_50933980_50934078_51064447_51064597_51075355_51075441_51089242_51089285_51090229_51090385_51146548_51146631_51159243_51159305_51160554_51160703_51208773_51208863_51214121_51214248_51225648_51225774_51227282_51227446_51227981_51228089_51228660_51228833_51229511_51229610_51236344_51236429_51237489_51237591_51246725_51246808_51260155_51260327_51270814_51271008_51275078_51275207_51278436_51278529_51280105_51280205_51310231_51310327_51312003_51312080_51312475_51312577_51312843_51312903_51314979_51315129_51330137_51330224_51333157_51333254_51338358_51338420_51338934_51339029_51341236_51341386_51348851_51348939_51350287_51350393_51354881_51355024_51356088_51356256_51356406_51356494_51356961_51357142_51357757_51357842_51357960_51358078_51360510_51360633_51361858_51361998_51362526_51362675_51374468_51374588_51375747_51375836_51380124_51380208_51381049
H1_mix_00061330	chr3	+	8902	51	NIC	ENSG00000088538.13	novel	9069	53	NA	NA	-26	-19	combination_of_known_splicesites	TRUE	canonical	3	8	junction_25	17.5661606505235	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAAATACGTGATACTGAT	-46	True	NA	-9	True	ATTAAA	-1	NA	50674900	51384179	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_50675301_50778674_50778759_50841674_50841716_50890025_50890082_50933980_50934078_51064447_51064597_51075355_51075441_51089242_51089285_51090229_51090385_51146548_51146631_51159243_51159305_51160554_51160703_51208773_51208863_51214121_51214248_51225648_51225774_51227282_51227446_51227981_51228089_51228660_51228833_51229511_51229610_51236344_51236429_51237489_51237591_51246725_51246808_51260155_51260327_51270814_51271008_51275078_51275207_51280105_51280205_51310231_51310327_51312003_51312080_51312475_51312577_51312843_51312903_51314979_51315129_51330137_51330224_51333157_51333254_51338358_51338420_51338934_51339029_51341236_51341386_51348851_51348939_51350287_51350393_51354881_51355024_51356088_51356256_51356406_51356494_51356961_51357142_51357757_51357842_51357960_51358078_51360510_51360633_51361858_51361998_51362526_51362675_51374468_51374588_51375747_51375836_51380124_51380208_51381049
H1_mix_00061331	chr3	+	925	4	FSM	ENSG00000145050.19	ENST00000528157.7	909	4	-69	53	-69	0	multi-exon	FALSE	canonical	3	696	junction_1	26.106618998935	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGCAGAATTATAGTGAAT	NA	False	NA	17	True	ATTAAA	-22	NA	51385221	51389344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_51385437_51386207_51386336_51387736_51387879_51388904
H1_mix_00061332	chr3	+	1509	3	FSM	ENSG00000145050.19	ENST00000470900.1	1509	3	0	0	0	0	multi-exon	FALSE	canonical	3	737	junction_1	11	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGCAGAATTATAGTGAAT	119	False	NA	17	True	ATTAAA	-22	NA	51385408	51389344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_51386336_51387736_51387879_51388904
H1_mix_00061339	chr3	+	1334	5	FSM	ENSG00000164081.13	ENST00000341333.10	1320	5	-14	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	38.1149576937978	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTGTGTATTTGTTT	2	True	NA	16	True	AATAAA	-28	NA	51671237	51704323	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_51671289_51674270_51674563_51684412_51684635_51699405_51699575_51703723
H1_mix_00061340	chr3	+	3829	3	FSM	ENSG00000164081.13	ENST00000463857.1	3937	3	108	0	108	0	multi-exon	FALSE	canonical	3	142	junction_2	3	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGATTTGGGTTGTGTAT	9685	False	NA	10	True	AATAAA	-22	NA	51681568	51704317	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_51684635_51699405_51699575_51703723
H1_mix_00061348	chr3	+	1473	15	FSM	ENSG00000243989.9	ENST00000404366.7	1473	15	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	87.4984547968519	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGACACTCGTGGAGCAAG	-21	True	NA	36	True	AATAAA	-36	NA	51983476	51989195	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_51983585_51984046_51984159_51985206_51985272_51985360_51985466_51985851_51985947_51986254_51986332_51986414_51986505_51986604_51986662_51986987_51987062_51987146_51987197_51987308_51987454_51987555_51987625_51988523_51988604_51988765_51988827_51988910
H1_mix_00061349	chr3	+	1422	15	FSM	ENSG00000243989.9	ENST00000636358.2	1422	15	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_1	25.176114368462	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACACTCGTGGAGCAAGAA	37	True	NA	38	True	AATAAA	-38	NA	51983534	51989197	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_51983590_51984046_51984159_51985206_51985272_51985360_51985466_51985851_51985947_51986254_51986332_51986414_51986505_51986604_51986662_51986987_51987062_51987146_51987197_51987308_51987454_51987555_51987625_51988523_51988604_51988765_51988827_51988910
H1_mix_00061350	chr3	+	745	6	FSM	ENSG00000243989.9	ENST00000637034.1	745	6	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_2	12.0764233115604	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTATGGACAGGGCTGTCT	870	False	NA	1	True	AATAAA	-1	NA	51987056	51989160	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_51987197_51987308_51987454_51987555_51987625_51988523_51988604_51988765_51988827_51988910
H1_mix_00061353	chr3	+	2375	12	FSM	ENSG00000023330.15	ENST00000484952.6	2375	12	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_2	98.3040484945214	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTCTGCTATTGGCTA	-2	True	NA	33	True	AATAAA	-18	NA	52198159	52214327	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_52198256_52198671_52198849_52199209_52199441_52202506_52202735_52203862_52204013_52204692_52204916_52205838_52206024_52206571_52206752_52208082_52208248_52211282_52211552_52212257_52212421_52214019
H1_mix_00061365	chr3	+	3273	13	FSM	ENSG00000010322.16	ENST00000488380.5	3168	13	-105	0	-92	0	multi-exon	FALSE	canonical	3	336	junction_9	24.6813019645777	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGCACCTCTCTTTC	6	True	NA	6	True	AATAAA	-16	NA	52455511	52481910	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_52455735_52457842_52457927_52458661_52458845_52470858_52470908_52471813_52471978_52472302_52472399_52473733_52473830_52476446_52476600_52477573_52477643_52478096_52478283_52478448_52478578_52479748_52479863_52480183
H1_mix_00061366	chr3	+	2602	14	FSM	ENSG00000010322.16	ENST00000420808.2	2589	14	-13	0	0	0	multi-exon	FALSE	canonical	3	34	junction_13	92.1056121361899	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCACCTCTCTTTCCTTT	-11	True	NA	10	True	AATAAA	-20	NA	52455603	52481914	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_52455735_52457842_52457927_52458661_52458845_52470858_52470908_52471813_52471978_52472302_52472399_52473733_52473830_52476446_52476600_52477573_52477643_52478096_52478283_52478448_52478578_52479748_52479863_52480183_52480296_52480878
H1_mix_00061367	chr3	+	5139	21	FSM	ENSG00000010322.16	ENST00000345716.9	5139	21	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_13	33.9033921606673	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATCTTCTAAACCAAGGG	-11	True	NA	36	True	AATAAA	-19	NA	52455603	52493068	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_52455735_52457842_52457927_52458661_52458845_52470858_52470908_52471813_52471978_52472302_52472399_52473733_52473830_52476446_52476600_52477573_52477643_52478096_52478283_52478448_52478578_52479748_52479863_52480183_52480296_52484512_52484638_52485777_52485828_52487195_52488606_52489335_52489679_52490074_52490232_52490704_52490834_52491351_52491514_52491871
H1_mix_00061372	chr3	+	1772	2	FSM	ENSG00000168273.8	ENST00000477703.6	1769	2	-3	0	0	0	multi-exon	FALSE	canonical	3	348	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTGTCTGCTGTGGGT	-3	True	NA	12	True	AATAAA	-13	NA	52536601	52541890	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_52536907_52540423
H1_mix_00061373	chr3	+	274	2	FSM	ENSG00000168273.8	ENST00000307106.3	274	2	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATTGGTTTCAGTGCCTT	-3	True	NA	-21	True	AATAAA	-17	NA	52536601	52540525	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_52536774_52540423
H1_mix_00061378	chr3	+	2137	14	FSM	ENSG00000163938.17	ENST00000496254.5	2118	14	-19	0	0	0	multi-exon	FALSE	canonical	3	1032	junction_4	127.693419828336	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTATCTGGAATAAAAAAAG	9	True	NA	-35	True	AAAAAG	-29	NA	52686029	52694459	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_52686106_52686768_52686828_52687245_52687384_52687501_52687616_52688108_52688193_52689073_52689207_52690591_52691072_52691541_52691630_52692871_52693047_52693186_52693330_52693407_52693545_52693631_52693808_52694036_52694104_52694192
H1_mix_00061380	chr3	+	225	1	FSM	ENSG00000212452.1	ENST00000391150.1	77	1	-149	1	-149	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCTCTTAACCTCCAAA	204	False	NA	NA	False	NA	NA	NA	52692586	52692811	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_52692600_52692800
H1_mix_00061385	chr3	+	2836	19	FSM	ENSG00000163932.15	ENST00000330452.8	2833	19	-3	0	-3	0	multi-exon	FALSE	canonical	3	39	junction_1	31.412085823811	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTGTCAGGACACGTT	-7	True	NA	10	True	AATAAA	-17	NA	53161205	53192717	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_53161429_53165103_53165216_53178403_53178538_53179576_53179777_53181206_53181268_53181443_53181607_53181700_53181733_53183120_53183207_53183451_53183582_53184873_53184975_53185603_53185701_53185926_53186028_53186166_53186341_53186603_53186696_53187339_53187403_53188719_53188859_53189057_53189247_53189872_53190002_53192107
H1_mix_00061397	chr3	+	2206	7	FSM	ENSG00000180376.17	ENST00000442522.6	2188	7	-18	0	0	0	multi-exon	FALSE	canonical	3	26	junction_6	43.4757275832031	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAGGCGGAGATTGCAGT	18	True	NA	NA	False	NA	NA	NA	56557209	56570671	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_56557254_56558845_56558911_56559568_56559595_56563683_56564126_56566593_56566760_56566949_56567054_56569312
H1_mix_00061398	chr3	+	2346	8	FSM	ENSG00000180376.17	ENST00000434467.5	2413	8	-7	74	0	1	multi-exon	FALSE	canonical	3	7	junction_3	63.8499516564469	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGGCGGAGATTGCAGTG	11	True	NA	NA	False	NA	NA	NA	56557202	56570672	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_56557254_56558845_56558911_56559568_56559595_56560861_56561013_56563683_56564126_56566593_56566741_56566949_56567054_56569312
H1_mix_00061399	chr3	+	3058	18	FSM	ENSG00000180376.17	ENST00000341455.10	3042	18	-16	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	33.2709335201319	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCTTAGTAGTAAAAAAAAAA	11	True	NA	7	True	AATAAA	-22	NA	56557202	56621808	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_56557254_56558845_56558911_56559568_56559595_56563683_56564126_56566593_56566741_56566949_56567054_56571180_56571303_56592969_56593102_56593490_56593742_56593943_56594029_56613588_56613751_56615127_56615273_56615921_56616054_56617111_56617606_56618171_56618213_56619270_56619528_56619776_56619902_56621531
H1_mix_00061401	chr3	+	2783	3	FSM	ENSG00000180376.17	ENST00000476142.1	2783	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	11.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTACTTGTTCTATACA	NA	False	NA	-39	True	ATTAAA	-24	NA	56617100	56621762	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_56619528_56619776_56619902_56621531
H1_mix_00061407	chr3	+	6381	25	FSM	ENSG00000163681.16	ENST00000671191.1	6381	25	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_13	39.0992105276934	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTCAGAATTTCTGTGTA	18	True	NA	3	True	ATTAAA	-18	NA	57756308	57930003	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_57756343_57756547_57757850_57831382_57831531_57841298_57841372_57847196_57847234_57849753_57849817_57857732_57857829_57858087_57858160_57860698_57860840_57861948_57862087_57864547_57864717_57864806_57864858_57865241_57865293_57871635_57871699_57890040_57890101_57896510_57896592_57896872_57896933_57907883_57908007_57909075_57909151_57912380_57912702_57913157_57913276_57916905_57917078_57922888_57923024_57925844_57925935_57927295
H1_mix_00061408	chr3	+	6240	23	FSM	ENSG00000163681.16	ENST00000659705.1	6240	23	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_22	45.8443512927661	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTCAGAATTTCTGTGTA	18	True	NA	3	True	ATTAAA	-18	NA	57756308	57930003	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_57756343_57756547_57757850_57831382_57831531_57841298_57841372_57847196_57847234_57849753_57849817_57857732_57857829_57858087_57858160_57860698_57860840_57861948_57862087_57864547_57864717_57864806_57864858_57871635_57871699_57890040_57890101_57896510_57896592_57896872_57896933_57907883_57908007_57909075_57909151_57912380_57912702_57913157_57913276_57916905_57917078_57922888_57923024_57927295
H1_mix_00061409	chr3	+	4613	22	NIC	ENSG00000163681.16	novel	6381	25	NA	NA	1	454	combination_of_known_junctions	FALSE	canonical	3	26	junction_11	33.9956646562396	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACCAACAAATTTCCTGGT	19	True	NA	NA	False	NA	NA	NA	57756309	57928401	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_57756343_57756547_57757850_57831382_57831531_57841298_57841372_57847196_57847234_57849753_57849817_57857732_57857829_57858087_57858160_57860698_57860840_57861948_57862087_57864547_57864717_57890040_57890101_57896510_57896592_57896872_57896933_57907883_57908007_57909075_57909151_57912380_57912702_57913157_57913276_57916905_57917078_57922888_57923024_57925844_57925935_57927295
H1_mix_00061410	chr3	+	5389	23	NIC	ENSG00000163681.16	novel	6381	25	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_11	40.8184855222555	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTGACGTGCATGATTTAA	31	False	NA	-31	True	ATTAAA	-17	NA	57756321	57929126	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_57756343_57756547_57757850_57831382_57831531_57841298_57841372_57847196_57847234_57849753_57849817_57857732_57857829_57858087_57858160_57860698_57860840_57861948_57862087_57864547_57864717_57871635_57871699_57890040_57890101_57896510_57896592_57896872_57896933_57907883_57908007_57909075_57909151_57912380_57912702_57913157_57913276_57916905_57917078_57922888_57923024_57925844_57925935_57927295
H1_mix_00061411	chr3	+	3504	15	FSM	ENSG00000163681.16	ENST00000417128.6	3504	15	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	36.9238736995401	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTGACGTGCATGATTTAA	NA	False	NA	-31	True	ATTAAA	-17	NA	57860759	57929126	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_57860840_57861948_57862087_57864547_57864717_57864806_57864858_57890040_57890101_57896510_57896592_57896872_57896933_57907883_57908007_57909075_57909151_57912380_57912702_57913157_57913276_57916905_57917078_57922888_57923024_57925844_57925935_57927295
H1_mix_00061415	chr3	+	8084	47	FSM	ENSG00000136068.16	ENST00000490882.5	8079	47	-5	0	-3	0	multi-exon	TRUE	canonical	3	28	junction_25	138.639582505968	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCTGGAGAGAGTTCTT	303	False	NA	26	True	AAAACA	-9	NA	58008394	58170774	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_58008857_58077045_58077295_58078716_58078815_58081628_58081777_58094835_58094955_58096140_58096219_58097814_58097978_58098710_58098909_58102202_58102341_58103958_58104086_58105079_58105217_58106679_58106874_58108457_58108572_58109178_58109323_58109575_58109700_58110009_58110171_58111790_58111882_58112148_58112319_58118871_58118990_58121240_58121504_58123092_58123691_58124331_58124506_58125580_58125744_58126601_58126763_58130740_58130909_58131926_58132020_58132807_58132932_58134615_58134773_58135978_58136169_58138281_58138530_58141857_58141930_58142649_58142753_58143472_58143614_58145920_58146050_58146819_58146994_58148205_58148365_58148648_58148853_58149849_58150003_58150104_58150228_58153374_58153642_58154790_58154929_58155959_58156076_58159553_58159687_58163153_58163331_58168439_58168659_58169589_58169794_58170574
H1_mix_00061417	chr3	+	9396	45	FSM	ENSG00000136068.16	ENST00000358537.7	9391	45	-5	0	-3	0	multi-exon	FALSE	canonical	3	46	junction_29	129.932044778533	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTGTTCTTGGA	303	False	NA	21	True	AATAAA	-17	NA	58008394	58172251	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_58008857_58077045_58077295_58078716_58078815_58081628_58081777_58094835_58094955_58096140_58096219_58097814_58097978_58098710_58098909_58102202_58102341_58103958_58104086_58105079_58105217_58106679_58106874_58108457_58108572_58109178_58109323_58109575_58109700_58110009_58110171_58111790_58111882_58112148_58112319_58118871_58118990_58121240_58121504_58123092_58123691_58124331_58124506_58125580_58125744_58126601_58126763_58130740_58130909_58132807_58132932_58134615_58134773_58135978_58136169_58138281_58138530_58142649_58142753_58143472_58143614_58145920_58146050_58146819_58146994_58148205_58148365_58148648_58148853_58149849_58150003_58150104_58150228_58153374_58153642_58154790_58154929_58155959_58156076_58159553_58159687_58163153_58163331_58168439_58168659_58169589_58169794_58170574
H1_mix_00061424	chr3	+	3127	5	FSM	ENSG00000255154.9	ENST00000461393.7	3127	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	101.512006679013	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGTTGATATTTGGATT	-14	True	NA	8	True	NA	NA	NA	58306519	58320193	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_58306652_58310506_58310592_58316514_58316592_58316914_58316994_58317439
H1_mix_00061433	chr3	+	9357	30	FSM	ENSG00000144724.20	ENST00000474889.6	9357	30	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_14	59.1724941724396	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTAGTGTTGAGCATTT	-1	True	NA	7	True	AATAAA	-18	NA	61561570	62297609	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_61562373_61748877_61748983_61989624_61989805_62003348_62003498_62078162_62078259_62132601_62132669_62157066_62157225_62167970_62168164_62191468_62191654_62195061_62195171_62201504_62201555_62203172_62203951_62218850_62218984_62231224_62231312_62243806_62243899_62255123_62255216_62262797_62262895_62267409_62267493_62267684_62267820_62269034_62269170_62271382_62271556_62272945_62273082_62273697_62273845_62275872_62275967_62276971_62277049_62277550_62277680_62281562_62281710_62282726_62282870_62292420_62292557_62293160
H1_mix_00061435	chr3	+	560	5	FSM	ENSG00000114405.11	ENST00000486169.5	582	5	0	22	0	-22	multi-exon	FALSE	canonical	3	9	junction_4	102.541455031611	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGGCTCATGTCTATAAT	7	True	NA	NA	False	AATAAA	-18	NA	62319014	62324111	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_62319056_62319720_62319833_62320459_62320525_62321929_62322054_62323893
H1_mix_00061436	chr3	+	697	5	FSM	ENSG00000114405.11	ENST00000232519.9	690	5	-7	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	109.909906286922	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGTCAGTGTTGTGAGT	7	True	NA	12	True	ATTAAA	-24	NA	62319014	62333646	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_62319056_62320459_62320525_62321929_62322054_62331324_62331400_62333254
H1_mix_00061438	chr3	+	2035	9	NIC	ENSG00000244342.5	novel	1957	9	NA	NA	-62	-1	combination_of_known_splicesites	FALSE	canonical	3	30	junction_7	20.2422824799972	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGTCTCGATGTCTGCT	NA	False	NA	14	True	AATAAA	-16	NA	62950367	63125061	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_62950519_62952006_62952084_62985035_62985120_63106302_63106423_63113576_63113767_63118698_63118943_63122255_63122320_63123322_63123449_63124082
H1_mix_00061445	chr3	+	1096	9	FSM	ENSG00000144741.19	ENST00000413054.5	1096	9	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	114.596506818489	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATAAGTTTGGTAATG	NA	False	NA	4	True	NA	NA	NA	66243202	66378056	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_66243313_66262050_66262156_66263331_66263380_66346363_66346409_66362859_66362930_66369477_66369543_66370528_66370603_66371201_66371414_66377689
H1_mix_00061446	chr3	+	1840	9	FSM	ENSG00000144741.19	ENST00000483224.5	1840	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	115.756681772587	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCCCTCTTTCACATTGC	NA	False	NA	NA	False	AATAAA	-22	NA	66243202	66378927	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_66243313_66262050_66262156_66263331_66263380_66304452_66304538_66346363_66346409_66362859_66362930_66369477_66369543_66370528_66370603_66377689
H1_mix_00061460	chr3	+	5173	8	ISM	ENSG00000163605.15	ENST00000356692.10	4957	9	37	2	9	-2	intron_retention	FALSE	canonical	3	797	junction_7	67.9201211508258	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTATGTGTGTAATTA	15	True	NA	23	True	AATAAA	-14	NA	72996847	73069196	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_72997072_72998076_72998159_73047185_73047357_73059036_73059131_73061022_73061061_73063672_73063748_73064002_73064147_73064851
H1_mix_00061463	chr3	+	1147	2	NNC	ENSG00000287398.1	novel	790	3	NA	NA	-29	-25077	at_least_one_novel_splicesite	FALSE	canonical	3	719	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCTAAAATACGAAGGTTT	NA	False	NA	NA	False	NA	NA	NA	75214480	75215693	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_75214556_75214621
H1_mix_00061468	chr3	+	1107	3	FSM	ENSG00000242516.3	ENST00000656252.1	671	3	-436	0	-6	0	multi-exon	FALSE	canonical	2	11	junction_1	15	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATGATAGAACAATTTATA	-10	True	NA	16	True	AATAAA	-20	NA	75672247	75679300	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_75672770_75675763_75675881_75678832
H1_mix_00061469	chr3	+	1767	5	FSM	ENSG00000242516.3	ENST00000669013.1	1767	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	13.8991906239176	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTTGTATAATGACTT	296	False	NA	21	True	TATAAA	-17	NA	75672584	75680092	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_75672770_75673193_75673239_75673846_75674007_75675763_75675881_75678832
H1_mix_00061470	chr3	+	716	4	FSM	ENSG00000242516.3	ENST00000665741.1	716	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	9.93310961716756	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATGATAGAACAATTTATA	395	False	NA	16	True	AATAAA	-20	NA	75672683	75679300	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_75672770_75673193_75673239_75675763_75675881_75678832
H1_mix_00061492	chr3	+	3489	6	FSM	ENSG00000169379.17	ENST00000681377.1	3489	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	4.42718872423573	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTTAAGCATTTTAAAAACA	NA	False	NA	NA	False	AATATA	-44	NA	94035733	94055133	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_94036755_94039879_94039989_94043014_94043241_94049405_94049523_94050823_94050893_94053186
H1_mix_00061494	chr3	+	388	3	FSM	ENSG00000178694.10	ENST00000461625.1	378	3	-10	0	3	0	multi-exon	FALSE	canonical	2	4	junction_2	6	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCGGAGATGCCTGGAAT	-22	True	NA	NA	False	AAAACA	-12	NA	94063000	94064518	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_94063139_94063811_94063980_94064436
H1_mix_00061496	chr3	+	6431	6	FSM	ENSG00000178694.10	ENST00000314622.9	6431	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	10.5565145763173	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGTACTGAATTTTTT	38	True	NA	8	True	AATAAA	-16	NA	94063060	94131832	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_94063139_94064436_94064547_94084106_94084451_94094139_94094295_94095032_94095155_94126210
H1_mix_00061501	chr3	+	10796	22	FSM	ENSG00000080200.10	ENST00000389622.7	10779	22	-17	0	-17	0	multi-exon	FALSE	canonical	2	5	junction_2	9.51499592182205	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGGTAATTTGCTGTTC	-12	True	NA	28	True	AATAAA	-34	NA	97821993	97944984	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_97822356_97843194_97843262_97864216_97864648_97871841_97878038_97879703_97879749_97879984_97880101_97881071_97881220_97886630_97886768_97888340_97888456_97889354_97889391_97892859_97892994_97895958_97896086_97898882_97899026_97899136_97899264_97900452_97900486_97912166_97912277_97915609_97915737_97933693_97933834_97936784_97936909_97941147_97941307_97942283_97942444_97943225
H1_mix_00061507	chr3	+	1210	11	NNC	ENSG00000184220.12	novel	4302	10	NA	NA	-8	0	at_least_one_novel_splicesite	TRUE	canonical	3	37	junction_2	214.014111684253	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTTGAGCGGACCGTG	13	False	NA	30	True	AATAAA	-22	NA	99817874	100178603	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_99818044_100010130_100010181_100146972_100147062_100160429_100160502_100162302_100162433_100166334_100166395_100167737_100167841_100171838_100171900_100172315_100172404_100176326_100176416_100178304
H1_mix_00061508	chr3	+	3807	19	FSM	ENSG00000036054.13	ENST00000394144.9	3697	19	-114	4	-114	0	multi-exon	FALSE	canonical	3	45	junction_14	45.5463744135823	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTTGTTCTTAAAGAC	NA	False	NA	18	True	AATAAA	-15	NA	100260877	100325234	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_100261072_100279648_100279761_100281741_100281848_100283606_100283812_100290577_100290702_100295086_100295212_100295301_100295349_100296171_100296276_100297922_100298046_100299238_100299332_100302066_100302238_100304845_100304889_100306436_100306544_100310402_100310543_100311832_100311878_100316098_100316188_100319068_100319205_100320776_100320972_100323586
H1_mix_00061512	chr3	+	7251	10	FSM	ENSG00000114021.12	ENST00000394140.9	7233	10	-18	0	0	0	multi-exon	FALSE	canonical	3	299	junction_1	41.4165828302304	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCTGAAAACAGTGCCTT	6	True	NA	NA	False	AGTAAA	-25	NA	100334738	100361635	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_100334799_100339086_100339206_100339814_100339936_100341072_100341162_100345584_100345679_100346180_100346256_100348802_100348882_100352403_100352503_100354771_100354828_100355176
H1_mix_00061515	chr3	+	1813	4	FSM	ENSG00000206535.8	ENST00000489752.1	1813	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	18.9091394715771	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGTCATTGGTATGACT	7	False	NA	1	True	CATAAA	-11	NA	100401610	100456301	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_100402440_100429696_100429886_100451679_100451950_100455776
H1_mix_00061517	chr3	+	1567	6	FSM	ENSG00000181458.10	ENST00000323523.8	1567	6	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	27.9614019677126	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGAAATCTTTGTTTTT	6	True	NA	16	True	AATAAA	-25	NA	100492618	100577444	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_100492929_100555208_100555402_100556759_100556973_100558404_100558590_100568821_100568968_100576924
H1_mix_00061518	chr3	+	1714	7	NIC	ENSG00000181458.10	novel	1910	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	76	junction_1	34.296501279285	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGAAATCTTTGTTTTT	6	True	NA	16	True	AATAAA	-25	NA	100492618	100577444	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_100492929_100519461_100519609_100555208_100555402_100556759_100556973_100558404_100558590_100568821_100568968_100576924
H1_mix_00061520	chr3	+	1802	8	FSM	ENSG00000114354.15	ENST00000675047.1	1804	8	1	1	1	0	multi-exon	FALSE	canonical	3	244	junction_1	302.09965918821	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGTGGTCTTGAAATTTT	112	False	NA	17	True	AATAAA	-14	NA	100709295	100748963	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_100709432_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736705_100744832_100744932_100748148
H1_mix_00061521	chr3	+	1815	8	FSM	ENSG00000114354.15	ENST00000490574.6	1816	8	1	0	1	0	multi-exon	FALSE	canonical	3	244	junction_1	239.10351272183	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	112	False	NA	18	True	AATAAA	-15	NA	100709295	100748964	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_100709432_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736717_100744832_100744932_100748148
H1_mix_00061522	chr3	+	1793	8	FSM	ENSG00000114354.15	ENST00000675499.1	1805	8	12	0	-10	0	multi-exon	FALSE	canonical	2	12	junction_1	316.497993029714	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	5	True	NA	18	True	AATAAA	-15	NA	100709306	100748964	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_100709432_100713653_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736717_100744832_100744932_100748148
H1_mix_00061523	chr3	+	2059	8	FSM	ENSG00000114354.15	ENST00000674645.1	1960	8	-122	23	-10	0	multi-exon	FALSE	canonical	3	271	junction_6	232.520264642434	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTAATAAAGATGATTGAAT	5	True	NA	-5	True	TATAAA	-19	NA	100709306	100748941	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_100709722_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736705_100744832_100744932_100748148
H1_mix_00061528	chr3	+	2015	9	FSM	ENSG00000114354.15	ENST00000674758.1	2015	9	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	405.130457383791	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	38	False	NA	18	True	AATAAA	-15	NA	100709471	100748964	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_100709722_100710970_100711069_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736705_100744832_100744932_100748148
H1_mix_00061529	chr3	+	1929	8	FSM	ENSG00000114354.15	ENST00000240851.9	1907	8	-22	0	0	0	multi-exon	FALSE	canonical	3	683	junction_1	108.962641042043	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	38	False	NA	18	True	AATAAA	-15	NA	100709471	100748964	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_100709722_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736717_100744832_100744932_100748148
H1_mix_00061530	chr3	+	1854	8	FSM	ENSG00000114354.15	ENST00000675243.1	1854	8	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	316.497993029714	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	-15	True	NA	18	True	AATAAA	-15	NA	100709535	100748964	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_100709722_100713653_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736717_100744832_100744932_100748148
H1_mix_00061531	chr3	+	2027	8	FSM	ENSG00000114354.15	ENST00000487505.6	2005	8	-23	1	-23	0	multi-exon	FALSE	canonical	3	57	junction_1	301.330315739511	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGTGGTCTTGAAATTTT	271	False	NA	17	True	AATAAA	-14	NA	100709946	100748963	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_100710296_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736717_100744832_100744932_100748148
H1_mix_00061532	chr3	+	1837	2	FSM	ENSG00000174173.7	ENST00000309922.7	1813	2	-24	0	-24	0	multi-exon	FALSE	canonical	3	678	junction_1	0	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATGAGCCATTCAAGCA	-28	True	NA	26	True	AGTAAA	-23	NA	101561843	101566446	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_101562004_101564769
H1_mix_00061535	chr3	+	2175	5	FSM	ENSG00000081154.12	ENST00000460231.5	2165	5	-10	0	0	0	multi-exon	FALSE	canonical	3	656	junction_1	804.80261555241	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAGTACCAATAAATTTG	-9	True	NA	-21	True	NA	NA	NA	101574179	101594407	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_101574280_101579841_101580005_101585436_101585512_101590214_101590271_101592626
H1_mix_00061536	chr3	+	2054	4	FSM	ENSG00000081154.12	ENST00000469941.5	2028	4	-56	30	-42	0	multi-exon	FALSE	canonical	3	82	junction_1	1160.24432292896	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAGTACCAATAAATTTG	NA	False	NA	-21	True	NA	NA	NA	101574137	101594407	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_101574280_101585436_101585512_101590214_101590271_101592626
H1_mix_00061537	chr3	+	742	3	FSM	ENSG00000081154.12	ENST00000486406.5	742	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	1221	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGGCATTTGTTTTGTTT	30	True	NA	25	True	AGTAAA	-27	NA	101574218	101593251	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_101574280_101590214_101590271_101592626
H1_mix_00061538	chr3	+	2786	1	FSM	ENSG00000256628.3	ENST00000609682.1	2743	1	-63	20	-63	-20	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAACTATTACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	101676411	101679197	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_101676400_101679200
H1_mix_00061545	chr3	+	2560	3	FSM	ENSG00000144802.11	ENST00000495089.1	877	3	-176	-1507	-176	8	multi-exon	FALSE	canonical	3	67	junction_1	5.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACATGCATTTTCTTTTC	165	False	NA	27	True	AATAAA	-23	NA	101856504	101861030	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_101857184_101857291_101857460_101859317
H1_mix_00061547	chr3	+	4189	15	FSM	ENSG00000170017.12	ENST00000472644.6	4189	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	70.4703223103926	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTATGCCTAAAAGATAATA	85	False	NA	-22	True	NA	NA	NA	105367342	105576861	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_105367482_105520066_105520168_105524288_105524509_105532001_105532067_105533602_105533691_105534662_105534846_105539974_105540103_105541632_105541766_105545222_105545336_105547148_105547285_105547389_105547524_105550126_105550260_105552467_105552586_105571851_105571965_105574476
H1_mix_00061549	chr3	+	393	1	FSM	ENSG00000239997.1	ENST00000496394.1	590	1	-95	292	-95	-292	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTATAACTGATTGTGTAA	NA	False	NA	NA	False	NA	NA	NA	106848575	106848968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_106848600_106849000
H1_mix_00061556	chr3	+	717	7	FSM	ENSG00000198919.13	ENST00000486815.5	705	7	-12	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	56.0079359456219	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAATGACCATTGGTTT	-3	True	NA	NA	False	CATAAA	-20	NA	108589721	108629111	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_108589840_108608088_108608159_108611173_108611330_108616540_108616658_108624443_108624525_108625844_108625970_108629061
H1_mix_00061557	chr3	+	5304	33	FSM	ENSG00000198919.13	ENST00000361582.8	5304	33	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_21	24.0473978581883	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTATTTTATCTGTGTAT	-3	True	NA	5	True	AATAAA	-16	NA	108589721	108694840	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_108589840_108605334_108605439_108608088_108608159_108611173_108611330_108616540_108616658_108624443_108624525_108625844_108625970_108629061_108629177_108632952_108633073_108634870_108634973_108636615_108636709_108637495_108637549_108642437_108642515_108644163_108644782_108646616_108646650_108647942_108648113_108648917_108648963_108651136_108651163_108654144_108654311_108661876_108661973_108662129_108662258_108669680_108669750_108672559_108672657_108674077_108674182_108675785_108675874_108677496_108677599_108684215_108684342_108686444_108686585_108687975_108688097_108688592_108688737_108688822_108688925_108690786_108690904_108693359
H1_mix_00061560	chr3	+	9771	9	NIC	ENSG00000177707.11	novel	1876	9	NA	NA	21	7897	combination_of_known_junctions	FALSE	canonical	2	10	junction_7	76.6052176747772	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACTAAGATTTTTCATTT	32	False	NA	2	True	AATAAA	-8	NA	111071836	111201436	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_111072178_111112029_111112372_111118655_111118953_111122120_111122239_111126183_111126336_111144898_111145038_111147402_111147485_111192350_111192414_111193199
H1_mix_00061561	chr3	+	2362	4	FSM	ENSG00000240891.8	ENST00000636933.1	7710	4	58	5290	58	-5290	multi-exon	FALSE	canonical	1	2	junction_3	2.44948974278318	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGAATGGCTGCCAGGTA	20	False	NA	NA	False	NA	NA	NA	111674733	111721706	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_111675409_111707925_111708387_111713886_111714129_111720722
H1_mix_00061562	chr3	+	5798	19	NIC	ENSG00000144824.21	novel	5673	18	NA	NA	-26	-10	combination_of_known_junctions	FALSE	canonical	2	23	junction_2	39.5383857866919	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGACATGATTTCACATT	9	True	NA	-7	True	ATTAAA	-2	NA	111732470	111976237	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_111732704_111845820_111845936_111884063_111885413_111913318_111913703_111919071_111919216_111920281_111920420_111932268_111932398_111939474_111939631_111940534_111940646_111945267_111945358_111948931_111949076_111952571_111952713_111953929_111954030_111962107_111962313_111966612_111966704_111967677_111967825_111969689_111969910_111973731_111973818_111974422
H1_mix_00061563	chr3	+	5674	18	FSM	ENSG00000144824.21	ENST00000393923.7	5673	18	-1	0	-1	0	multi-exon	FALSE	canonical	2	23	junction_2	43.2066731998257	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATCTCTTATTTTGAAGT	-4	True	NA	23	True	AATAAA	-1	NA	111732495	111976267	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_111732704_111845820_111845936_111884063_111885413_111913318_111913703_111919071_111919216_111920281_111920420_111939474_111939631_111940534_111940646_111945267_111945358_111948931_111949076_111952571_111952713_111953929_111954030_111962107_111962313_111966612_111966704_111967677_111967825_111969689_111969910_111973731_111973818_111974422
H1_mix_00061564	chr3	+	1861	2	FSM	ENSG00000144824.21	ENST00000478922.1	1861	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAAGTAGTCAGTGAAAT	-5	True	NA	NA	False	ATTAAA	-19	NA	111859749	111885795	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_111859879_111884063
H1_mix_00061565	chr3	+	5487	17	NIC	ENSG00000144824.21	novel	5543	18	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_5	28.6419163988725	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATCTGTAGTATGATGGA	10	True	NA	45	True	AATAAA	-23	NA	111859764	111976289	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_111859879_111884063_111885413_111913318_111913703_111919071_111919216_111920281_111920420_111939474_111939631_111940534_111940646_111945267_111945358_111948931_111949076_111952571_111952713_111953929_111954030_111962107_111962313_111966612_111966704_111967677_111967825_111969689_111969910_111973731_111973818_111974422
H1_mix_00061566	chr3	+	5543	18	FSM	ENSG00000144824.21	ENST00000393925.7	5543	18	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_5	23.4238809912457	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTCACATTTGAAAATAAA	0	True	NA	3	True	ATTAAA	-12	NA	111859795	111976247	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_111859879_111884063_111885413_111913318_111913703_111919071_111919216_111920281_111920420_111932268_111932398_111939474_111939631_111940534_111940646_111945267_111945358_111948931_111949076_111952571_111952713_111953929_111954030_111962107_111962313_111966612_111966704_111967677_111967825_111969689_111969910_111973731_111973818_111974422
H1_mix_00061567	chr3	+	2862	6	FSM	ENSG00000144824.21	ENST00000486886.1	2943	6	81	0	81	0	multi-exon	FALSE	canonical	3	125	junction_2	16.7403703662733	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAACTCTGACATCATA	NA	False	NA	1	True	AATGAA	-9	NA	111962025	111976453	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_111962313_111966612_111966704_111967677_111967825_111969689_111969910_111973731_111973818_111974422
H1_mix_00061568	chr3	+	1358	4	FSM	ENSG00000144827.9	ENST00000491580.1	1339	4	-19	0	-19	0	multi-exon	FALSE	canonical	2	14	junction_1	99.2717930173969	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACTTAAAATTGAGCTTT	6	True	NA	NA	False	TATAAA	-15	NA	111978990	111992271	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_111979204_111986263_111986376_111986913_111987052_111991376
H1_mix_00061569	chr3	+	2612	5	FSM	ENSG00000144827.9	ENST00000273359.8	2604	5	-8	0	0	0	multi-exon	FALSE	canonical	3	203	junction_4	13.6816482925121	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGAGTCTTATGAGTCTT	-11	True	NA	33	True	AATAAA	-24	NA	111979017	111993368	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_111979204_111981783_111981968_111986263_111986376_111986913_111987052_111991376
H1_mix_00061572	chr3	+	1230	4	FSM	ENSG00000144834.14	ENST00000455401.6	1164	4	-66	0	-66	0	multi-exon	FALSE	canonical	3	19	junction_3	2.05480466765633	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTACAGTGTAAAGTTC	157	False	NA	2	True	AATAAA	-14	NA	111999122	112013881	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_111999603_112000771_112000947_112011762_112011866_112013409
H1_mix_00061574	chr3	+	2252	6	FSM	ENSG00000114529.13	ENST00000264848.10	2237	6	-15	0	-15	0	multi-exon	FALSE	canonical	3	64	junction_3	12.0099958368019	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGCATTCCCATTGGC	-15	True	NA	20	True	AATACA	-17	NA	112086373	112118210	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_112086546_112093359_112093490_112102837_112102966_112109542_112109614_112112963_112113146_112116641
H1_mix_00061580	chr3	+	2019	5	FSM	ENSG00000091972.18	ENST00000383681.7	1997	5	-22	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	69.7759808243496	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAACAATTAAAAGTGTTG	-16	True	NA	0	True	AGTAAA	-4	NA	112333155	112362784	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_112333225_112344961_112345289_112347557_112347831_112349711_112349820_112361542
H1_mix_00061581	chr3	+	2039	5	FSM	ENSG00000091972.18	ENST00000478595.1	2017	5	-22	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	94.4176228254027	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTGGCTTATGATAT	-16	True	NA	25	True	ATTAAA	-13	NA	112333155	112362809	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_112333225_112344961_112345289_112347562_112347831_112349711_112349820_112361542
H1_mix_00061582	chr3	+	2129	6	FSM	ENSG00000091972.18	ENST00000315711.12	2129	6	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	71.8871337584133	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGGCTTATGATATTCT	-16	True	NA	28	True	ATTAAA	-16	NA	112333155	112362812	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_112333225_112340901_112340984_112344961_112345289_112347557_112347831_112349711_112349820_112361542
H1_mix_00061586	chr3	+	4350	7	FSM	ENSG00000138459.9	ENST00000492406.6	4366	7	0	16	0	-16	multi-exon	FALSE	canonical	3	175	junction_3	20.6619618300554	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTTTTTTTTAAGATG	2	True	NA	NA	False	AATAAA	-3	NA	112562044	112585563	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_112562274_112563384_112563534_112569170_112569270_112570539_112570671_112573888_112573957_112580545_112581327_112582670
H1_mix_00061593	chr3	+	4606	20	FSM	ENSG00000144857.15	ENST00000495514.5	4646	20	32	8	-20	0	multi-exon	TRUE	canonical	1	6	junction_2	3.25891064850794	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCAAACTGAGTCATGTG	9	True	NA	14	True	AATAAA	-20	NA	113211513	113287451	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_113212017_113216186_113216275_113249721_113249900_113250554_113250834_113268298_113268446_113270800_113270945_113272409_113272704_113273068_113273342_113274374_113274683_113278097_113278258_113278672_113278784_113279248_113279456_113279823_113280006_113280557_113280664_113281030_113281154_113283410_113283633_113284334_113284568_113284781_113284859_113285371_113285566_113286674
H1_mix_00061595	chr3	+	4574	20	FSM	ENSG00000144857.15	ENST00000682979.1	4574	20	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	4.08089936315371	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTCATGTGTGAGTCAG	-6	True	NA	22	True	AATAAA	-28	NA	113211556	113287459	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_113212017_113216186_113216275_113249721_113249900_113250554_113250834_113268298_113268446_113270800_113270945_113272409_113272704_113273068_113273342_113274374_113274683_113278094_113278258_113278672_113278784_113279248_113279456_113279823_113280006_113280557_113280664_113281030_113281154_113283410_113283633_113284334_113284568_113284781_113284859_113285371_113285566_113286674
H1_mix_00061601	chr3	+	6346	5	FSM	ENSG00000184307.17	ENST00000638807.2	6346	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	13.2735639524583	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTGGGATTTATTTAT	1	True	NA	NA	False	AATAAA	-20	NA	113948012	113963373	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_113948191_113948685_113948964_113953699_113954411_113956338_113956507_113958362
H1_mix_00061611	chr3	+	1935	7	FSM	ENSG00000114638.8	ENST00000460625.1	1937	7	0	2	0	-2	multi-exon	FALSE	canonical	1	1	junction_3	14.3575377028545	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTCACTTTCATTTTTA	5	True	NA	5	True	AGTAAA	-14	NA	119186737	119205139	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_119186811_119187774_119187976_119190244_119190320_119191005_119191105_119194218_119194399_119199056_119199141_119203916
H1_mix_00061613	chr3	+	3531	11	FSM	ENSG00000163389.12	ENST00000295588.9	3508	11	-23	0	-23	0	multi-exon	FALSE	canonical	3	117	junction_4	14.7787008901324	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGCTTTGTCTTTATTTA	NA	False	NA	NA	False	AATGAA	-24	NA	119468939	119494708	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_119469107_119469819_119469911_119471308_119471453_119477312_119477449_119480050_119480173_119485327_119485388_119486832_119486933_119488928_119488988_119490550_119490719_119491517_119491575_119492281
H1_mix_00061614	chr3	+	1351	11	NNC	ENSG00000163389.12	novel	3508	11	NA	NA	18	-390	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_10	37.2055103445713	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATTGTTAAGTTGTAT	33	False	NA	NA	False	AATAAA	-24	NA	119469017	119492087	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_119469107_119469819_119469911_119471308_119471453_119477312_119477449_119480050_119480173_119485327_119485388_119486832_119486933_119488928_119488988_119490550_119490719_119491517_119491575_119491762
H1_mix_00061623	chr3	+	4161	18	FSM	ENSG00000183833.16	ENST00000273390.9	4433	18	14	258	0	-258	multi-exon	FALSE	canonical	2	6	junction_9	10.092307530009	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGATATTTTCTTTAAAAA	-23	True	NA	NA	False	AATAAA	-25	NA	119703035	119766844	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_119703223_119706808_119706886_119707403_119707562_119708590_119708675_119709838_119709896_119715561_119715744_119726170_119726349_119730219_119730378_119732293_119732477_119733363_119733507_119737365_119737483_119739254_119739327_119740548_119740696_119743974_119744197_119747114_119747264_119747810_119747903_119750936_119751099_119765051
H1_mix_00061625	chr3	+	1984	3	NIC	ENSG00000242622.3	novel	1772	3	NA	NA	-138	15	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	3	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTGATTGAATACTTGA	9	False	NA	NA	False	AATAAA	-17	NA	120095110	120100440	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_120095779_120098713_120098980_120099390
H1_mix_00061626	chr3	+	2400	2	FSM	ENSG00000242622.3	ENST00000469070.1	982	2	-164	-1254	-143	15	multi-exon	FALSE	canonical	2	7	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTGATTGAATACTTGA	4	True	NA	NA	False	AATAAA	-17	NA	120095105	120100440	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_120095779_120098713
H1_mix_00061628	chr3	+	659	3	FSM	ENSG00000065518.8	ENST00000184266.3	651	3	-8	0	0	0	multi-exon	FALSE	canonical	3	3456	junction_1	108	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATTCTACAATCAGTTGT	-7	True	NA	NA	False	ATTAAA	-21	NA	120596327	120602507	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_120596540_120601110_120601258_120602207
H1_mix_00061630	chr3	+	560	3	FSM	ENSG00000065518.8	ENST00000491335.1	558	3	-2	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	1824.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTAGTTTCTCTTTCTTA	20	True	NA	27	True	AATAAA	-19	NA	120596354	120602328	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_120596647_120601110_120601258_120602207
H1_mix_00061634	chr3	+	9274	27	FSM	ENSG00000145087.13	ENST00000471454.6	9291	27	-23	40	-23	-40	multi-exon	FALSE	canonical	1	1	junction_25	5.88549515796571	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTGTAGAGATATCAATAAA	NA	False	NA	NA	False	NA	NA	NA	120908181	121424721	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_120908335_120909570_120909768_120954939_120955038_121041699_121041782_121045434_121045536_121114924_121115060_121121640_121121705_121152476_121152561_121157503_121157628_121205922_121206002_121223002_121223158_121233615_121233689_121238970_121239119_121240439_121240508_121250722_121250764_121254894_121255113_121257160_121257334_121259042_121259169_121279804_121279957_121318474_121318541_121378715_121378887_121381292_121381533_121407242_121407604_121413157_121413324_121415856_121415969_121418336_121418558_121419055
H1_mix_00061636	chr3	+	843	5	FSM	ENSG00000145088.9	ENST00000490434.5	829	5	-14	0	-14	0	multi-exon	FALSE	canonical	3	10	junction_2	37.8310388437854	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAATATGTCTTAACTTT	198	False	NA	-49	True	AATAAA	-16	NA	121835168	121886468	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_121835392_121844452_121844548_121857010_121857157_121872536_121872789_121886341
H1_mix_00061637	chr3	+	998	6	FSM	ENSG00000145088.9	ENST00000273668.7	998	6	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	17.3366663462155	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATGTTATGTATTTGTT	-13	True	NA	9	True	ATTAAA	-19	NA	121835208	121886526	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_121835392_121844452_121844548_121854686_121854824_121857010_121857157_121872536_121872789_121886341
H1_mix_00061655	chr3	+	3417	7	FSM	ENSG00000121542.12	ENST00000492595.6	3401	7	-16	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	22.1484887871736	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTTTCATTATTTGG	-17	True	NA	8	True	TATAAA	-18	NA	123201926	123274136	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_123201987_123209198_123209400_123223558_123223723_123225102_123225298_123245898_123246015_123259523_123259590_123271521
H1_mix_00061657	chr3	+	7477	7	NNC	ENSG00000121542.12	novel	1011	8	NA	NA	1038	101	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_1	34.8827400809563	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTAAAGTCCTGGCCG	0	True	NA	109	True	AAAAAG	-24	NA	123203088	123274237	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_123207108_123209198_123209400_123223558_123223723_123225102_123225298_123245898_123246015_123259523_123259590_123271521
H1_mix_00061658	chr3	+	4228	6	FSM	ENSG00000121542.12	ENST00000309934.4	4228	6	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_3	6.58483105326173	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAATGTTTTCTTTCATT	5233	False	NA	2	True	TATAAA	-12	NA	123208321	123274130	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_123209400_123223558_123223723_123225102_123225298_123245898_123246015_123259523_123259590_123271521
H1_mix_00061660	chr3	+	3998	24	FSM	ENSG00000160145.16	ENST00000684382.1	4248	24	250	0	6	0	multi-exon	FALSE	canonical	1	2	junction_8	3.10192330117165	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGATTCCATTTCATATA	19	False	NA	NA	False	NA	NA	NA	124384974	124519428	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_124385037_124395134_124395305_124398696_124398872_124413469_124413666_124422811_124422979_124430655_124430776_124434333_124434526_124438887_124439038_124441944_124442060_124446160_124446277_124446762_124446886_124455176_124455360_124456609_124456729_124461889_124461957_124462523_124462634_124474662_124474733_124477244_124477335_124482807_124482901_124488203_124488316_124490693_124490885_124491322_124491425_124492739_124492883_124496310_124496414_124518399
H1_mix_00061664	chr3	+	6674	6	FSM	ENSG00000114491.14	ENST00000232607.7	6652	6	-22	0	-3	0	multi-exon	FALSE	canonical	3	437	junction_4	26.9547769421303	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTCATGGCATTTGTT	-18	True	NA	30	True	AATAGA	-18	NA	124730429	124749273	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_124730628_124735092_124735247_124737567_124738240_124740023_124740200_124742151_124742267_124743914
H1_mix_00061668	chr3	+	2018	5	FSM	ENSG00000171084.16	ENST00000485843.2	2027	5	4	5	0	-1	multi-exon	FALSE	canonical	3	7	junction_1	5.22015325445528	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAATCTACAGATGATCTG	NA	False	NA	NA	False	AATAAA	-26	NA	125916618	125930019	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_125916818_125918863_125918927_125920824_125920906_125924965_125925116_125928494
H1_mix_00061670	chr3	+	1947	2	FSM	ENSG00000246022.4	ENST00000500232.3	2325	2	1	377	1	-363	multi-exon	FALSE	canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCATCCTGCCTCCAGGAG	-8	True	NA	NA	False	NA	NA	NA	126180064	126209792	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_126180545_126208325
H1_mix_00061672	chr3	+	1000	8	FSM	ENSG00000159685.11	ENST00000290913.8	1000	8	-29	29	-29	0	multi-exon	FALSE	canonical	3	356	junction_4	28.8825913247522	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCAGTCGTTGACTCAC	-31	True	NA	7	True	AATAAA	-13	NA	126704210	126960391	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_126704400_126727077_126727187_126730560_126730631_126733077_126733223_126852646_126852731_126914679_126914751_126957415_126957552_126960195
H1_mix_00061682	chr3	+	2059	6	NIC	ENSG00000132394.11	novel	2205	7	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_3	56.7006172805905	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTCTCTCTCTCTGTG	0	True	NA	16	True	AATAAA	-26	NA	128153461	128408646	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_128153824_128246835_128247044_128262127_128262225_128341232_128341890_128358216_128358374_128408068
H1_mix_00061685	chr3	+	2949	6	FSM	ENSG00000075785.14	ENST00000675864.1	2985	6	0	36	0	-36	multi-exon	FALSE	canonical	2	5	junction_5	562.631886760784	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGGAAATTAATGAAGAT	-1	True	NA	NA	False	AATAAA	-27	NA	128726135	128825906	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_128726360_128795359_128795421_128797942_128798070_128806371_128806591_128807542_128807672_128823717
H1_mix_00061686	chr3	+	1599	6	FSM	ENSG00000075785.14	ENST00000482525.5	1589	6	-10	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	558.920960422849	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATGTGCAATGGATAAAT	6	True	NA	-26	True	AATACA	-3	NA	128726182	128814353	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_128726360_128795359_128795421_128797942_128798070_128806371_128806450_128807542_128807672_128813326
H1_mix_00061687	chr3	+	2122	5	FSM	ENSG00000075785.14	ENST00000674748.1	2122	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	572.356259247682	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCTGCCTTTGCCAGAG	6	True	NA	11	True	AATAAA	-18	NA	128726182	128814796	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_128726360_128797942_128798070_128806371_128806591_128807542_128807672_128813326
H1_mix_00061688	chr3	+	2185	6	FSM	ENSG00000075785.14	ENST00000265062.8	2185	6	0	0	0	0	multi-exon	FALSE	canonical	3	1172	junction_5	126.604897219657	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGCCTTTGCCAGAGTC	6	True	NA	13	True	AATAAA	-20	NA	128726182	128814798	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_128726360_128795359_128795421_128797942_128798070_128806371_128806591_128807542_128807672_128813326
H1_mix_00061690	chr3	+	2453	18	FSM	ENSG00000177646.20	ENST00000511227.5	2431	18	-22	0	-3	0	multi-exon	FALSE	canonical	3	26	junction_1	53.490807023134	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGTGAGGTGGGTGGGGA	-29	True	NA	-69	True	GGGGCT	-17	NA	128879600	128912927	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_128880018_128884652_128884747_128893554_128893657_128895309_128895417_128896435_128896537_128897631_128897711_128899286_128899462_128901275_128901350_128902552_128902629_128904061_128904133_128904385_128904506_128906120_128906250_128908184_128908265_128908972_128909100_128909343_128909422_128910020_128910150_128910740_128910814_128912506
H1_mix_00061691	chr3	+	1725	12	FSM	ENSG00000177646.20	ENST00000681552.1	1703	12	-22	0	-3	0	multi-exon	FALSE	canonical	3	4	junction_11	70.5408855127693	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAAGAAACAGCTTGAAAG	-29	True	NA	-5	True	NA	NA	NA	128879600	128912991	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_128879842_128884652_128884747_128893554_128893657_128895309_128895417_128896435_128896537_128897631_128897711_128899286_128899462_128901275_128901350_128902552_128902629_128904061_128904133_128904385_128904506_128912506
H1_mix_00061692	chr3	+	2464	18	FSM	ENSG00000177646.20	ENST00000308982.12	2445	18	-19	0	-3	0	multi-exon	FALSE	canonical	3	201	junction_13	22.4328293781688	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGCTGTACTTGTCAC	-29	True	NA	29	True	TATAAA	-24	NA	128879600	128913114	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_128879842_128884652_128884747_128893554_128893657_128895309_128895417_128896435_128896537_128897631_128897711_128899286_128899462_128901275_128901350_128902552_128902629_128904061_128904133_128904385_128904506_128906120_128906250_128908184_128908265_128908972_128909100_128909343_128909422_128910020_128910150_128910740_128910814_128912506
H1_mix_00061694	chr3	+	2536	7	NNC	ENSG00000183624.14	novel	2485	7	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	233.208359388957	1046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTTTGTTTTTCATTAT	-11	True	NA	15	True	AATAAA	-15	NA	129278836	129306186	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_129278906_129279709_129279916_129288835_129288998_129290678_129290805_129298353_129298536_129301949_129302143_129304588
H1_mix_00061695	chr3	+	2485	7	FSM	ENSG00000183624.14	ENST00000383463.9	2485	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	214.463477854234	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTTTGTTTTTCATTAT	22	True	NA	15	True	AATAAA	-15	NA	129278869	129306186	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_129278906_129279709_129279916_129288853_129288998_129290678_129290805_129298353_129298536_129301949_129302143_129304588
H1_mix_00061696	chr3	+	1940	7	FSM	ENSG00000183624.14	ENST00000389735.7	1763	7	-146	-31	0	0	multi-exon	FALSE	canonical	0	0	junction_5	243.967495558095	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGCCTACATTTTGGAA	-20	True	NA	44	True	AATAAA	-15	NA	129278827	129305293	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_129279212_129279709_129279916_129288853_129288998_129290678_129290805_129298353_129298536_129301949_129302143_129304588
H1_mix_00061697	chr3	+	2697	7	FSM	ENSG00000183624.14	ENST00000502878.6	1952	7	0	-745	0	0	multi-exon	FALSE	canonical	0	0	junction_5	229.104537032528	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTTTGTTTTTCATTAT	-26	True	NA	15	True	AATAAA	-15	NA	129278955	129306186	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_129279204_129279709_129279916_129288853_129288998_129290678_129290805_129298353_129298536_129301949_129302143_129304588
H1_mix_00061700	chr3	+	3860	29	FSM	ENSG00000163913.14	ENST00000689332.1	3952	29	-27	119	2	0	multi-exon	FALSE	canonical	3	44	junction_21	31.1669917950228	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTTTCTTGCCCAGAT	-17	True	NA	16	True	AATAAA	-16	NA	129440106	129520349	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_129440372_129449870_129449938_129451913_129451999_129458598_129458678_129461227_129461305_129463559_129463627_129464634_129464782_129469341_129469418_129476314_129476507_129476662_129476802_129478015_129478219_129479784_129479923_129481529_129481695_129483484_129483683_129488256_129488398_129492140_129492195_129495445_129495608_129499901_129500069_129502710_129502883_129504318_129504422_129506408_129506550_129507664_129507763_129512311_129512413_129514388_129514555_129515487_129515600_129517468_129517595_129519106_129519187_129519567_129519733_129520175
H1_mix_00061702	chr3	+	3877	28	FSM	ENSG00000163913.14	ENST00000440957.7	4007	28	71	59	2	-14	multi-exon	FALSE	canonical	2	3	junction_3	34.7858035152312	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGGAGATGAGGAAGAGAAT	-17	True	NA	115	True	NA	NA	NA	129440106	129520448	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_129440372_129449870_129449938_129451913_129451999_129461227_129461305_129463559_129463627_129464634_129464782_129469341_129469418_129476314_129476507_129476662_129476802_129478015_129478219_129479784_129479923_129481529_129481695_129483484_129483683_129488256_129488398_129492140_129492195_129495445_129495608_129499901_129500069_129502710_129502883_129504318_129504422_129506408_129506550_129507667_129507763_129512311_129512413_129514388_129514555_129515487_129515600_129517468_129517595_129519106_129519187_129519567_129519733_129520175
H1_mix_00061703	chr3	+	3829	28	FSM	ENSG00000163913.14	ENST00000688020.1	3916	28	-74	161	4	0	multi-exon	FALSE	canonical	3	12	junction_5	42.7503359150601	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTTTCTTGCCCAGAT	32	True	NA	16	True	AATAAA	-16	NA	129440155	129520349	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_129440372_129449870_129449938_129451913_129451999_129463559_129463627_129464634_129464782_129466889_129467067_129469341_129469418_129476314_129476507_129476662_129476802_129478015_129478219_129479784_129479923_129481529_129481695_129483484_129483683_129488256_129488398_129492140_129492195_129495445_129495608_129499901_129500069_129502710_129502883_129504318_129504422_129506408_129506550_129507667_129507763_129512311_129512413_129514388_129514555_129515487_129515600_129517468_129517595_129519106_129519187_129519567_129519733_129520175
H1_mix_00061704	chr3	+	3589	27	FSM	ENSG00000163913.14	ENST00000349441.6	3569	27	-20	0	0	0	multi-exon	FALSE	canonical	3	44	junction_19	32.7347462105246	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTCTTGCCCAGATGA	-44	True	NA	18	True	AATAAA	-18	NA	129440223	129520351	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_129440372_129449870_129449938_129451913_129451999_129463559_129463627_129464634_129464782_129469341_129469418_129476314_129476507_129476662_129476802_129478015_129478219_129479784_129479923_129481529_129481695_129483484_129483683_129488256_129488398_129492140_129492195_129495445_129495608_129499901_129500069_129502710_129502883_129504318_129504422_129506408_129506550_129507664_129507763_129512311_129512413_129514388_129514555_129515487_129515600_129517468_129517595_129519106_129519187_129519567_129519733_129520175
H1_mix_00061705	chr3	+	4052	30	FSM	ENSG00000163913.14	ENST00000348417.7	4075	30	-12	35	0	0	multi-exon	FALSE	canonical	3	12	junction_7	40.7721839851673	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATTTTCTAAGGAAAAA	-56	True	NA	NA	False	NA	NA	NA	129440211	129520472	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_129440372_129449870_129449938_129451913_129451999_129458598_129458678_129461227_129461305_129463559_129463627_129464634_129464782_129466889_129467067_129469341_129469418_129476314_129476507_129476662_129476802_129478015_129478219_129479784_129479923_129481529_129481695_129483484_129483683_129488256_129488398_129492140_129492195_129495445_129495608_129499901_129500069_129502710_129502883_129504318_129504422_129506408_129506550_129507667_129507763_129512311_129512413_129514388_129514555_129515487_129515600_129517468_129517595_129519106_129519187_129519567_129519733_129520175
H1_mix_00061706	chr3	+	3640	27	FSM	ENSG00000163913.14	ENST00000693588.1	3757	27	4	113	4	0	multi-exon	FALSE	canonical	3	55	junction_3	27.6088485944282	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTTTCTTGCCCAGAT	44	False	NA	16	True	AATAAA	-16	NA	129440167	129520349	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_129440372_129449870_129449938_129451913_129451999_129463559_129463627_129464634_129464782_129469341_129469418_129476314_129476507_129476662_129476802_129478015_129478219_129479784_129479923_129481529_129481695_129483484_129483683_129488256_129488398_129492140_129492195_129495445_129495608_129499901_129500069_129502710_129502883_129504318_129504422_129506408_129506550_129507667_129507763_129512311_129512413_129514388_129514555_129515487_129515600_129517468_129517595_129519106_129519187_129519567_129519733_129520175
H1_mix_00061709	chr3	+	2854	6	FSM	ENSG00000163913.14	ENST00000513190.1	2854	6	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_2	11.0562199688682	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTTTCTTGCCCAGAT	4655	False	NA	16	True	AATAAA	-16	NA	129512357	129520349	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_129514555_129515487_129515600_129517468_129517595_129519106_129519187_129519567_129519733_129520175
H1_mix_00061714	chr3	+	370	3	FSM	ENSG00000228252.9	ENST00000430317.2	568	3	0	198	0	-198	multi-exon	FALSE	canonical	1	1	junction_2	2	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAAACCAAACTACTTCT	NA	False	NA	NA	False	AATAAA	-18	NA	130264441	130267243	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_130264485_130266269_130266367_130267013
H1_mix_00061716	chr3	+	4983	28	FSM	ENSG00000017260.20	ENST00000508532.5	4969	28	-14	0	-14	0	multi-exon	FALSE	canonical	3	115	junction_1	99.5493687451523	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATCCCAGTGGGGACTA	-20	True	NA	23	True	AATAAA	-19	NA	130893976	131003150	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_130894338_130894707_130894776_130930415_130930527_130932021_130932139_130934621_130934712_130937427_130937464_130940629_130940692_130941590_130941700_130953820_130953977_130955011_130955081_130956103_130956180_130959274_130959342_130963970_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605_130997754_130998293_130998390_130999517_130999660_131001219
H1_mix_00061718	chr3	+	3773	29	NIC	ENSG00000017260.20	novel	3690	28	NA	NA	11	-1	combination_of_known_junctions	FALSE	canonical	3	43	junction_28	121.448086667111	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTCCCAAGCTGTGGTG	29	True	NA	36	True	ATTAAA	-30	NA	130894025	131016708	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_130894338_130894589_130894776_130930415_130930527_130932021_130932139_130934621_130934712_130937427_130937464_130940629_130940692_130941590_130941700_130953820_130953977_130955011_130955081_130956103_130956180_130959274_130959342_130963970_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605_130997754_130998293_130998390_130999517_130999660_131001219_131001315_131016151
H1_mix_00061719	chr3	+	3466	29	NIC	ENSG00000017260.20	novel	3690	28	NA	NA	15	-294	combination_of_known_junctions	FALSE	canonical	3	79	junction_28	116.656153559361	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCACTGTAACAGCTTTTC	33	True	NA	7	True	AATAAA	-28	NA	130894029	131016375	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_130894338_130894589_130894776_130930415_130930527_130932021_130932139_130934621_130934712_130937427_130937464_130940629_130940692_130941590_130941700_130953820_130953977_130955011_130955081_130956103_130956180_130959274_130959342_130963970_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605_130997754_130998293_130998390_130999517_130999660_131001219_131001345_131016151
H1_mix_00061720	chr3	+	4994	28	FSM	ENSG00000017260.20	ENST00000510168.6	4994	28	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	84.4435834913876	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATCCCAGTGGGGACTA	1	True	NA	23	True	AATAAA	-19	NA	130894083	131003150	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_130894338_130894589_130894776_130930415_130930527_130932021_130932139_130934621_130934712_130937427_130937464_130940629_130940692_130941590_130941700_130953820_130953977_130955011_130955081_130956103_130956180_130959274_130959342_130963970_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605_130997754_130998293_130998390_130999517_130999660_131001219
H1_mix_00061721	chr3	+	4714	27	FSM	ENSG00000017260.20	ENST00000504948.5	4714	27	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_1	83.1445949454266	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATCCCAGTGGGGACTA	-18	True	NA	23	True	AATAAA	-19	NA	130894177	131003150	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_130894338_130930415_130930527_130932021_130932139_130934621_130934712_130937427_130937464_130940629_130940692_130941590_130941700_130953820_130953977_130955011_130955081_130956103_130956180_130959274_130959342_130963970_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605_130997754_130998293_130998390_130999517_130999660_131001219
H1_mix_00061722	chr3	+	3148	26	FSM	ENSG00000017260.20	ENST00000504612.5	3148	26	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_25	104.958658528013	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTTTACTGTTCTCTTT	147	False	NA	12	True	ATTAAA	-6	NA	130932043	131016684	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_130932139_130934621_130934712_130937427_130937464_130940629_130940692_130941590_130941700_130953820_130953977_130955011_130955081_130956103_130956180_130959274_130959342_130963970_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605_130997754_130998293_130998390_130999517_130999660_131001219_131001345_131016151
H1_mix_00061723	chr3	+	4730	16	FSM	ENSG00000017260.20	ENST00000514654.5	4730	16	0	0	0	0	multi-exon	FALSE	canonical	3	464	junction_7	60.7551003803156	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATCCCAGTGGGGACTA	NA	False	NA	23	True	AATAAA	-19	NA	130962901	131003150	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605_130997754_130998293_130998390_130999517_130999660_131001219
H1_mix_00061727	chr3	+	2208	3	FSM	ENSG00000246082.3	ENST00000499077.3	2243	3	35	0	-32	0	multi-exon	FALSE	canonical	3	68	junction_1	41	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGGACCATATAGTAGT	11	True	NA	2	True	AATAAA	-16	NA	131361897	131365122	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_131362069_131362171_131362442_131363355
H1_mix_00061729	chr3	+	1565	2	FSM	ENSG00000198585.12	ENST00000502852.1	1552	2	-13	0	-2	0	multi-exon	FALSE	canonical	3	182	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATACATGATACCAGATGA	-12	True	NA	-11	True	NA	NA	NA	131381771	131383439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_131381943_131382045
H1_mix_00061741	chr3	+	2176	6	FSM	ENSG00000144868.14	ENST00000393130.7	2165	6	-11	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	33.2601864095798	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTCTCTTAATAACTATT	3	True	NA	18	True	AATAAA	-31	NA	133038390	133396228	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_133038436_133045901_133046021_133229269_133229352_133379751_133381162_133390179_133390335_133395863
H1_mix_00061742	chr3	+	3727	6	FSM	ENSG00000144868.14	ENST00000321871.11	3727	6	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	30.3156725143943	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTGCTAATACATTTT	3	True	NA	NA	False	AATAAA	-22	NA	133038390	133397775	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_133038436_133045901_133046021_133229265_133229352_133379751_133381162_133390179_133390335_133395863
H1_mix_00061747	chr3	+	2193	13	FSM	ENSG00000182923.20	ENST00000684217.1	2182	13	-11	0	0	0	multi-exon	FALSE	canonical	3	42	junction_9	56.1685830533602	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTCTCATACGAATAT	5	True	NA	14	True	AATAAA	-14	NA	134485742	134561767	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_134486053_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134547334_134547473_134549061_134549177_134550062_134550261_134551925_134552013_134561376
H1_mix_00061748	chr3	+	5319	12	FSM	ENSG00000182923.20	ENST00000332047.10	5319	12	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	37.3511370378002	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGTTAGTGTCTTAACA	5	True	NA	NA	False	ATTAAA	-17	NA	134485742	134565031	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_134486053_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134561376
H1_mix_00061750	chr3	+	1835	12	FSM	ENSG00000182923.20	ENST00000354446.7	1835	12	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_11	51.3744960362163	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACTATTTTGCCAAAGCT	53	False	NA	3	True	AATAAA	-17	NA	134485790	134575011	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_134486053_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134574792
H1_mix_00061751	chr3	+	5361	12	FSM	ENSG00000182923.20	ENST00000683861.1	5361	12	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	48.0459490814834	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGTTAGTGTCTTAACA	-3	True	NA	NA	False	ATTAAA	-17	NA	134486204	134565031	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_134486557_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134561376
H1_mix_00061752	chr3	+	5781	15	FSM	ENSG00000182923.20	ENST00000675561.1	5779	15	-2	0	0	0	multi-exon	FALSE	canonical	3	10	junction_14	76.9811797832193	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGTTAGTGTCTTAACA	-1	True	NA	NA	False	ATTAAA	-17	NA	134486054	134565031	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_134486203_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134547334_134547473_134549061_134549177_134550062_134550261_134551925_134552013_134558141_134558348_134559149_134559430_134561376
H1_mix_00061753	chr3	+	5293	13	FSM	ENSG00000182923.20	ENST00000383229.8	5293	13	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_9	58.6181143788619	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGTTAGTGTCTTAACA	1	True	NA	NA	False	ATTAAA	-17	NA	134486056	134565031	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_134486203_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134547334_134547473_134549061_134549177_134550062_134550261_134551925_134552013_134561376
H1_mix_00061755	chr3	+	1714	12	FSM	ENSG00000182923.20	ENST00000620544.5	1714	12	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_11	54.5095336266817	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATTAACACTATTTTGC	-1	True	NA	-4	True	AATAAA	-10	NA	134486054	134575004	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_134486203_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134574792
H1_mix_00061758	chr3	+	8597	7	FSM	ENSG00000182923.20	ENST00000683138.1	8575	7	-22	0	-22	0	multi-exon	FALSE	canonical	3	42	junction_3	67.7126280689208	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTAAATCTGAGTTAGT	6033	False	NA	NA	False	ATTAAA	-8	NA	134541546	134565022	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_134545820_134546148_134546289_134547334_134547473_134549061_134549177_134550062_134550261_134551925_134552013_134561376
H1_mix_00061763	chr3	+	7000	14	NNC	ENSG00000073711.11	novel	806	8	NA	NA	294	-5	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	24.0890851563242	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATCATGTTCATTAAGG	13	True	NA	5	True	AATAAA	-11	NA	135966037	136147889	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_135966422_136001058_136003494_136026831_136027099_136040858_136040963_136049258_136049362_136070477_136070553_136078366_136078454_136082264_136082422_136087882_136087932_136090577_136090668_136102006_136102183_136103257_136103377_136106215_136106323_136145042
H1_mix_00061765	chr3	+	1698	14	FSM	ENSG00000114054.14	ENST00000484181.5	1683	14	-15	0	0	0	multi-exon	FALSE	canonical	1	17	junction_11	142.700870570359	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCCTTACTGTAA	-14	True	NA	22	True	ATTAAA	-14	NA	136250339	136330169	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_136250559_136255855_136255976_136256554_136256624_136260478_136260536_136261951_136262066_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326802_136326911_136327633_136327733_136328757_136328858_136329904
H1_mix_00061766	chr3	+	1859	16	FSM	ENSG00000114054.14	ENST00000466072.5	1844	16	-15	0	0	0	multi-exon	FALSE	canonical	3	11	junction_10	180.509205674761	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCCTTACTGTAA	-14	True	NA	22	True	ATTAAA	-14	NA	136250339	136330169	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_136250559_136255855_136255976_136256554_136256624_136260478_136260536_136261951_136262066_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326325_136326386_136326802_136326911_136327154_136327256_136327633_136327733_136328757_136328858_136329904
H1_mix_00061767	chr3	+	1628	13	FSM	ENSG00000114054.14	ENST00000490504.5	1613	13	-15	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	155.512861204468	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCCTTACTGTAA	-14	True	NA	22	True	ATTAAA	-14	NA	136250339	136330169	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_136250559_136255855_136255976_136256554_136256624_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326802_136326911_136327154_136327256_136327633_136327733_136328757_136328858_136329904
H1_mix_00061770	chr3	+	1973	2	FSM	ENSG00000168917.9	ENST00000446465.3	1949	2	-24	0	18	0	multi-exon	FALSE	canonical	3	9	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCTGGTATCTTTATTG	-14	True	NA	14	True	ATTAAA	-17	NA	136819101	136855888	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_136819629_136854442
H1_mix_00061771	chr3	+	1937	4	FSM	ENSG00000158092.7	ENST00000288986.6	1937	4	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	22.9540604009158	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTCTCCCTCATCTGGT	-16	True	NA	7	True	AATAAA	-21	NA	136862207	136949126	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_136862320_136927983_136928228_136945582_136946296_136948258
H1_mix_00061774	chr3	+	279	1	FSM	ENSG00000168875.3	ENST00000306087.3	2020	1	1275	466	1275	-466	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTATATCTACAATATGCAT	1280	False	NA	NA	False	NA	NA	NA	137765589	137765868	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_137765600_137765900
H1_mix_00061776	chr3	+	4771	22	FSM	ENSG00000114098.18	ENST00000469044.6	4757	22	-14	0	-14	0	multi-exon	FALSE	canonical	3	145	junction_1	72.7931869927561	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCAACTTCTAAAAAGGAG	-8	True	NA	4	True	AATAAA	-16	NA	138187286	138298373	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_138187600_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
H1_mix_00061778	chr3	+	1722	11	FSM	ENSG00000114098.18	ENST00000489213.5	1714	11	-8	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	85.8580223392083	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTACTGTGCAAGTTTAA	11	True	NA	24	True	NA	NA	NA	138187341	138245635	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_138187600_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087
H1_mix_00061779	chr3	+	1670	12	FSM	ENSG00000114098.18	ENST00000470821.5	1656	12	-14	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	62.6815380045159	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATGTTTAGTGAGTG	-19	True	NA	7	True	AATAAA	-17	NA	138187516	138245681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_138187600_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087
H1_mix_00061780	chr3	+	2922	13	FSM	ENSG00000114098.18	ENST00000471453.5	2910	13	-12	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	84.4397796591683	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAGAAAAAGTTATAA	-19	True	NA	NA	False	NA	NA	NA	138187516	138246857	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_138187600_138188454_138188531_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087
H1_mix_00061781	chr3	+	2791	21	NIC	ENSG00000114098.18	novel	4757	22	NA	NA	3	-5	intron_retention	FALSE	canonical	3	69	junction_1	81.8083125360742	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TATATAAAAAAAAAGAAAAA	22	False	NA	29	True	AGTAAA	-43	NA	138187352	138296536	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_138187600_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
H1_mix_00061786	chr3	+	4047	22	FSM	ENSG00000158220.14	ENST00000486831.5	4044	22	-3	0	-3	0	multi-exon	FALSE	canonical	3	11	junction_17	6.88321762021631	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTGGTTGGATTTTT	2	True	NA	NA	False	TTTAAA	-12	NA	138434582	138477060	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_138435126_138452047_138452090_138455193_138455329_138457567_138457645_138459186_138459254_138459944_138460035_138460610_138460667_138462085_138462207_138464344_138464516_138465338_138465422_138467560_138467610_138468104_138468195_138468654_138468718_138468818_138468882_138469435_138469505_138470059_138471027_138472362_138473094_138473535_138473635_138474220_138474353_138476222_138476329_138476442_138476493_138476817
H1_mix_00061787	chr3	+	5925	23	FSM	ENSG00000158220.14	ENST00000389567.9	5915	23	-10	0	-10	0	multi-exon	FALSE	canonical	3	7	junction_18	7.23455893439307	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGTTAAGTTTTTCATGT	25	False	NA	NA	False	AGTAAA	-25	NA	138434605	138479925	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_138435126_138452047_138452090_138455193_138455329_138457567_138457645_138459186_138459254_138459944_138460035_138460610_138460667_138462085_138462207_138464344_138464516_138465338_138465422_138467560_138467610_138468104_138468195_138468654_138468718_138468818_138468882_138469435_138469505_138470059_138470147_138470876_138471027_138472362_138472860_138473535_138473635_138474220_138474353_138476222_138476329_138476442_138476493_138476817
H1_mix_00061789	chr3	+	927	5	FSM	ENSG00000158234.13	ENST00000393034.6	927	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	47.1062628532555	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATCTGCTTGATTTG	8	True	NA	NA	False	AATAAA	-8	NA	138609071	138633369	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_138609147_138621406_138621540_138622187_138622417_138629106_138629157_138632929
H1_mix_00061791	chr3	+	1798	7	FSM	ENSG00000175110.14	ENST00000480938.5	1774	7	-24	0	-1	0	multi-exon	TRUE	canonical	3	391	junction_1	45.4327953012897	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACATTTCTCTGTTAATA	-10	True	NA	12	True	AATACA	-20	NA	139344002	139357051	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_139344199_139346877_139347045_139348159_139348325_139350178_139351061_139352646_139352793_139355681_139355791_139356918
H1_mix_00061795	chr3	+	847	3	FSM	ENSG00000248932.7	ENST00000504670.7	852	3	5	0	-4	0	multi-exon	FALSE	canonical	3	5	junction_1	14.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGTGGATGAAAGAAATGT	-25	True	NA	75	True	AATAAA	-16	NA	139389810	139444604	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_139390248_139423015_139423115_139444293
H1_mix_00061798	chr3	+	5729	7	FSM	ENSG00000114120.14	ENST00000324194.12	5697	7	-32	0	-26	0	multi-exon	FALSE	canonical	3	97	junction_4	72.6605502012994	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTGACTTGAGTGCTCT	-32	True	NA	17	True	AATAAA	-28	NA	140941803	140980995	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_140942096_140956526_140956692_140959462_140959541_140963126_140963228_140970926_140970994_140973715_140974006_140976259
H1_mix_00061799	chr3	+	3556	4	FSM	ENSG00000114120.14	ENST00000507429.5	3537	4	-19	0	0	0	multi-exon	FALSE	canonical	3	245	junction_3	38.724095283887	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATTGTCTTGCATTTATG	32	True	NA	NA	False	AATAAA	-22	NA	140941867	140966211	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_140942096_140956526_140956692_140959462_140959541_140963126
H1_mix_00061800	chr3	+	4500	8	NIC	ENSG00000114120.14	novel	5809	9	NA	NA	1	-232	combination_of_known_junctions	FALSE	canonical	3	39	junction_4	108.16974566648	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGTTTATAAACTTTT	6	True	NA	NA	False	NA	NA	NA	140941841	140979701	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_140942096_140956526_140956692_140959462_140959541_140963126_140963228_140966933_140967037_140970926_140970994_140973715_140974006_140976259
H1_mix_00061813	chr3	+	5656	24	FSM	ENSG00000155903.14	ENST00000286364.9	5638	24	-18	0	-18	0	multi-exon	FALSE	canonical	3	54	junction_19	25.6326381027365	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTTGTGAGACTGTAT	14	False	NA	5	True	AATAAA	-17	NA	141487008	141615344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_141487217_141512162_141512281_141516327_141516432_141529707_141529803_141540532_141540610_141553856_141553941_141555839_141555913_141558885_141558963_141559893_141559996_141570911_141571069_141571405_141571555_141572608_141572724_141573146_141573222_141573943_141574068_141576999_141577107_141580367_141580452_141581099_141581178_141586024_141586099_141586645_141586753_141607677_141607761_141608488_141608698_141609419_141609524_141609876_141610067_141612282
H1_mix_00061814	chr3	+	5700	24	NIC	ENSG00000155903.14	novel	5638	24	NA	NA	-59	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_19	30.3156051700143	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTTGTGAGACTGTAT	NA	False	NA	5	True	AATAAA	-17	NA	141486967	141615344	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_141487217_141512162_141512281_141516327_141516432_141529707_141529803_141540532_141540610_141553856_141553941_141555839_141555913_141558885_141558963_141559893_141559996_141570911_141571069_141571405_141571555_141572608_141572724_141573146_141573222_141573943_141574068_141576999_141577107_141580367_141580452_141581099_141581178_141586024_141586099_141586645_141586756_141607677_141607761_141608488_141608698_141609419_141609524_141609876_141610067_141612282
H1_mix_00061815	chr3	+	1063	4	FSM	ENSG00000114125.14	ENST00000477012.5	1036	4	-27	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	718.99621386733	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAGTAACAAATAAAGTGCA	-29	True	NA	-7	True	AAAAAG	-7	NA	141738276	141745669	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_141738517_141742643_141742908_141743508_141743557_141745158
H1_mix_00061816	chr3	+	782	2	FSM	ENSG00000114125.14	ENST00000480908.1	782	2	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTTACTCTTAATTTGT	-29	True	NA	24	True	AATAAA	-17	NA	141738276	141745700	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_141738517_141745158
H1_mix_00061817	chr3	+	825	3	FSM	ENSG00000114125.14	ENST00000393000.3	805	3	-20	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	716	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTACTCTTAATTTGTTC	-29	True	NA	26	True	AATAAA	-19	NA	141738276	141745702	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_141738510_141743508_141743557_141745158
H1_mix_00061822	chr3	+	580	5	FSM	ENSG00000120756.13	ENST00000475296.5	580	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	196.003188749571	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGGTAACTGACTTCTCC	2	True	NA	NA	False	NA	NA	NA	142596417	142671117	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_142596510_142627815_142627909_142664201_142664308_142669389_142669554_142670992
H1_mix_00061823	chr3	+	564	5	FSM	ENSG00000120756.13	ENST00000464320.5	564	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	204.551185525775	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTAACTGACTTCTCCAA	-8	True	NA	NA	False	NA	NA	NA	142596454	142671119	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_142596510_142597236_142597349_142664201_142664308_142669389_142669554_142670992
H1_mix_00061826	chr3	+	4456	12	FSM	ENSG00000144935.16	ENST00000273482.10	4324	12	-132	0	3	0	multi-exon	TRUE	canonical	3	23	junction_2	29.3702497477964	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTCTGTTCATTGTATT	-1	True	NA	NA	False	AATAAA	-21	NA	142724036	142807888	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_142724732_142736378_142736534_142748257_142748461_142777631_142777764_142780833_142781030_142784703_142785041_142791018_142791159_142792823_142792968_142802168_142802345_142803976_142804179_142804435_142804631_142806007
H1_mix_00061829	chr3	+	3502	28	FSM	ENSG00000163714.18	ENST00000493598.6	3491	28	-11	0	0	0	multi-exon	FALSE	canonical	3	461	junction_9	115.745036957301	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTTTTTTGCCCCACC	12	True	NA	21	True	AATAAA	-21	NA	143001609	143056846	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_143001674_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841_143016976_143019968_143020037_143020598_143020694_143021349_143021383_143021472_143021556_143022496_143022663_143022852_143023065_143023974_143024019_143027148_143027254_143028339_143028411_143028486_143028647_143032783_143032947_143033270_143033351_143034887_143034976_143035981_143036105_143037178_143037336_143038107_143038204_143038893_143038961_143043116_143043277_143050938_143051050_143053675_143053795_143054942_143055120_143056311
H1_mix_00061831	chr3	+	1267	8	FSM	ENSG00000163714.18	ENST00000467348.1	1267	8	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_7	240.279004492694	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTTTTTTGCCCCACC	NA	False	NA	21	True	AATAAA	-21	NA	143036082	143056846	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_143036105_143037178_143037336_143038107_143038204_143038893_143038961_143043116_143043277_143050938_143051050_143053675_143053795_143056311
H1_mix_00061836	chr3	+	1890	7	FSM	ENSG00000163754.18	ENST00000296048.10	1890	7	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_5	27.4696802553895	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGGTTGTTTAATTAAAT	NA	False	NA	9	True	AATAAA	-16	NA	148991451	149027632	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_148991648_148994141_148994278_148996301_148996477_148996741_148996905_149009275_149009403_149024052_149024273_149026759
H1_mix_00061839	chr3	+	3051	10	FSM	ENSG00000082996.20	ENST00000474348.5	1027	10	-731	-1293	-273	0	multi-exon	TRUE	canonical	3	55	junction_5	90.8239376724054	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATCCAGTAAATGTCTGT	15	True	NA	7	True	AATAAA	-16	NA	149812496	149962126	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_149813354_149846010_149846141_149852515_149852597_149872028_149872155_149895472_149895571_149902071_149902163_149911977_149912084_149921133_149921228_149960055_149960137_149960739
H1_mix_00061840	chr3	+	2866	11	FSM	ENSG00000082996.20	ENST00000344229.7	2866	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	131.008434842952	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTAAGATCCAGTAAATGT	48	False	NA	3	True	AATAAA	-12	NA	149812769	149962122	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_149813354_149813924_149814027_149846010_149846141_149852515_149852597_149872028_149872155_149895472_149895561_149902071_149902163_149911977_149912084_149921133_149921228_149960055_149960137_149960739
H1_mix_00061844	chr3	+	1939	7	FSM	ENSG00000082996.20	ENST00000361785.10	1939	7	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	108.130579496377	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATCCAGTAAATGTCTGT	8031	False	NA	7	True	AATAAA	-16	NA	149872072	149962126	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_149872155_149895472_149895571_149902071_149902163_149911977_149912084_149921133_149921228_149960055_149960137_149960739
H1_mix_00061847	chr3	+	2159	14	FSM	ENSG00000144895.12	ENST00000460851.6	3879	14	-62	1782	0	0	multi-exon	FALSE	canonical	3	458	junction_4	70.702476878016	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTAATCACTGTTTTTA	48	False	NA	5	True	AATGAA	-13	NA	150546724	150584234	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_150546831_150552355_150552426_150558387_150558463_150562541_150562661_150563514_150563615_150564298_150564382_150567692_150567767_150567901_150568047_150568175_150568293_150571957_150572530_150575648_150575763_150581617_150581747_150583199_150583266_150583845
H1_mix_00061848	chr3	+	710	8	FSM	ENSG00000144895.12	ENST00000494558.5	710	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	202.367316067207	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTAGTGCAATTACGT	90	False	NA	NA	False	NA	NA	NA	150546766	150568274	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_150546831_150552355_150552426_150558387_150558463_150563514_150563615_150564298_150564382_150567692_150567767_150567901_150568047_150568175
H1_mix_00061853	chr3	+	3437	6	FSM	ENSG00000198843.14	ENST00000471696.6	3437	6	0	0	0	0	multi-exon	FALSE	canonical	3	904	junction_4	37.2912858453553	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAAAGGAACTCCTACTT	13	True	NA	5	True	AATAAA	-16	NA	150603320	150630436	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_150603500_150622384_150622496_150623042_150623170_150624811_150624900_150627009_150627164_150627658
H1_mix_00061855	chr3	+	708	4	NIC	ENSG00000240137.7	novel	3626	3	NA	NA	69	-7	combination_of_known_splicesites	FALSE	canonical	3	24	junction_2	3.39934634239519	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTTATAAAGGAAAGAGG	16	False	NA	4	True	AATAAA	-18	NA	150703554	150720140	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_150703668_150706926_150707172_150707931_150708010_150719868
H1_mix_00061857	chr3	+	2813	15	FSM	ENSG00000144893.13	ENST00000309237.8	2862	15	0	49	0	-49	multi-exon	FALSE	canonical	2	6	junction_13	5.45716155568973	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTATTTTATTATAAGAT	45	False	NA	NA	False	NA	NA	NA	151086393	151193696	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_151087026_151116337_151116443_151122782_151122975_151127824_151127985_151156160_151156331_151158688_151158800_151159831_151160102_151163892_151164043_151165419_151165520_151165845_151165983_151185329_151185462_151188353_151188481_151190716_151190932_151192549_151192655_151193489
H1_mix_00061865	chr3	+	5593	23	FSM	ENSG00000196549.13	ENST00000460393.6	5593	23	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_1	21.802124773244	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTTTATGCCTAGTCAA	-9	True	NA	8	True	AATAAA	-21	NA	155079671	155183704	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_155079757_155084157_155084328_155085058_155085095_155114993_155115156_155116478_155116560_155116663_155116760_155116867_155116987_155118745_155118812_155138101_155138237_155140190_155140293_155141990_155142128_155142236_155142331_155143442_155143572_155144358_155144458_155147143_155147225_155148549_155148654_155160389_155160449_155166901_155167022_155168491_155168626_155168731_155168798_155172116_155172213_155172535_155172613_155180359
H1_mix_00061866	chr3	+	5642	23	FSM	ENSG00000196549.13	ENST00000675418.2	5552	23	-64	-26	12	0	multi-exon	FALSE	canonical	3	42	junction_1	21.0251718480413	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTTTATGCCTAGTCAA	-10	True	NA	8	True	AATAAA	-21	NA	155079867	155183704	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_155080002_155084157_155084328_155085058_155085095_155114993_155115156_155116478_155116560_155116663_155116760_155116867_155116987_155118745_155118812_155138101_155138237_155140190_155140293_155141990_155142128_155142236_155142331_155143442_155143572_155144358_155144458_155147143_155147225_155148549_155148654_155160389_155160449_155166901_155167022_155168491_155168626_155168731_155168798_155172116_155172213_155172535_155172613_155180359
H1_mix_00061867	chr3	+	6109	23	FSM	ENSG00000196549.13	ENST00000360490.7	5656	23	-479	26	-16	0	multi-exon	FALSE	canonical	3	54	junction_1	19.2626474498408	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAACAAACGTTTTTA	126	False	NA	-18	True	AATACA	-2	NA	155079839	155183678	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_155080467_155084157_155084328_155085058_155085095_155114993_155115156_155116478_155116560_155116663_155116760_155116867_155116987_155118745_155118812_155138101_155138237_155140190_155140293_155141990_155142128_155142236_155142331_155143442_155143572_155144358_155144458_155147143_155147225_155148549_155148654_155160389_155160449_155166901_155167022_155168491_155168626_155168731_155168798_155172116_155172213_155172535_155172613_155180359
H1_mix_00061875	chr3	+	2609	10	FSM	ENSG00000174891.14	ENST00000611884.5	2597	10	-12	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	19.5132117320231	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGATTTGTGTGGTTTTT	-21	True	NA	NA	False	AATAAA	-16	NA	158110076	158545730	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_158110224_158122102_158122299_158123865_158123992_158203071_158203246_158298038_158298076_158354856_158354909_158460934_158461004_158537091_158537199_158543334_158543488_158544182
H1_mix_00061877	chr3	+	1260	8	FSM	ENSG00000178053.20	ENST00000484955.5	1247	8	-13	0	-3	0	multi-exon	FALSE	canonical	3	18	junction_1	294.850013756562	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAGTAAATTGAGTCTAT	-2	True	NA	8	True	AATAAA	-18	NA	158571159	158605397	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_158571392_158588851_158588925_158592433_158592582_158596861_158596946_158598079_158598209_158600013_158600174_158602806_158602940_158605096
H1_mix_00061879	chr3	+	1959	6	FSM	ENSG00000178053.20	ENST00000619577.5	1959	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	267.517027495447	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGACTATGTTCATACT	4	True	NA	-11	True	AGTAAA	-3	NA	158571190	158606348	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_158571392_158596861_158596946_158598079_158598209_158600013_158600174_158602806_158602940_158605096
H1_mix_00061880	chr3	+	2171	7	FSM	ENSG00000178053.20	ENST00000355893.11	2168	7	-3	0	0	0	multi-exon	FALSE	canonical	3	557	junction_1	56.8782813461245	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTGTTGAAATTGAGCA	4	True	NA	15	True	AATAAA	-16	NA	158571190	158606456	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_158571348_158592433_158592582_158596861_158596946_158598079_158598209_158600013_158600174_158602806_158602940_158605096
H1_mix_00061881	chr3	+	6485	18	FSM	ENSG00000168827.15	ENST00000486715.6	6478	18	-9	2	-9	-2	multi-exon	FALSE	canonical	0	0	junction_6	87.149475855386	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGGTTGGATTATGGAT	-54	True	NA	14	True	AATAAA	-28	NA	158644517	158695579	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_158644716_158645628_158645782_158646164_158646298_158646742_158646948_158649040_158649158_158652095_158652247_158653309_158653468_158654546_158654632_158658921_158659060_158660873_158660976_158662627_158662685_158665336_158665475_158666303_158666387_158681994_158682158_158684523_158684669_158690162_158690324_158691138_158691193_158691335
H1_mix_00061882	chr3	+	3453	19	FSM	ENSG00000168827.15	ENST00000264263.9	3453	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	124.635678957254	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTCCTTTGCTTTTCTTG	25	True	NA	13	True	AATAAA	-13	NA	158644596	158692569	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_158644716_158645628_158645782_158646164_158646298_158646742_158646948_158649040_158649158_158650004_158650062_158652095_158652247_158653309_158653468_158654546_158654632_158658921_158659060_158660873_158660976_158662627_158662685_158665336_158665475_158666303_158666387_158681994_158682158_158684523_158684669_158690162_158690324_158691138_158691193_158691335
H1_mix_00061890	chr3	+	1815	7	FSM	ENSG00000151967.18	ENST00000445224.6	1645	7	-170	0	-170	0	multi-exon	FALSE	canonical	3	83	junction_1	22.6028513442196	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATATGTCTTTTTGCTCA	31	False	NA	16	True	AATAAA	-20	NA	159839690	159897360	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_159840215_159866162_159866282_159886206_159886325_159887707_159887906_159888819_159888944_159892096_159892191_159896722
H1_mix_00061903	chr3	+	3051	16	FSM	ENSG00000169251.13	ENST00000351193.7	3028	16	-23	0	0	0	multi-exon	FALSE	canonical	3	330	junction_1	49.8537416404783	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCGCATTGGTGTCATAT	-17	True	NA	35	True	AATAAA	-32	NA	161221287	161252307	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_161221410_161221993_161222058_161224929_161225065_161227246_161227344_161233398_161233480_161234726_161234856_161235121_161235213_161238112_161238192_161238729_161238827_161241045_161241164_161242507_161242654_161246335_161246449_161247257_161247331_161249453_161249561_161250255_161250327_161250779
H1_mix_00061904	chr3	+	1090	8	FSM	ENSG00000169251.13	ENST00000463518.5	1077	8	-13	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	154.253832684829	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTTCTGAACCTTGAAT	6	True	NA	NA	False	NA	NA	NA	161221310	161238191	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_161221725_161221993_161222058_161224929_161225065_161227246_161227344_161233398_161233480_161234726_161234856_161235121_161235213_161238112
H1_mix_00061905	chr3	+	2661	15	FSM	ENSG00000169251.13	ENST00000460469.1	3061	15	400	0	400	0	multi-exon	FALSE	canonical	3	363	junction_9	44.743258527665	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACTGTGTGGAACATTT	599	False	NA	9	True	AATAAA	-14	NA	161221958	161252004	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_161222058_161224929_161225065_161227246_161227344_161233398_161233480_161234726_161234856_161235121_161235213_161238112_161238192_161238729_161238827_161241045_161241164_161242507_161242654_161246335_161246449_161247257_161247331_161249453_161249561_161250255_161250327_161250779
H1_mix_00061914	chr3	+	5538	9	FSM	ENSG00000085274.16	ENST00000356716.8	2833	9	-1100	-1605	-1069	-567	multi-exon	TRUE	canonical	3	59	junction_2	63.5865551826799	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATAAAAATTTTTTTGCT	2847	False	NA	-9	True	AAGAAA	-9	NA	169772326	169789149	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_169773463_169774030_169774098_169774264_169774562_169778767_169779562_169780589_169780750_169782464_169782644_169783476_169783561_169784621_169784709_169786415
H1_mix_00061915	chr3	+	211	2	FSM	ENSG00000008952.17	ENST00000461933.1	363	2	152	0	-14	0	multi-exon	FALSE	canonical	3	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATATTTACCTCAAAAAAAA	-18	True	NA	NA	False	AAGAAA	-2	NA	169966786	169968523	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_169966859_169968384
H1_mix_00061916	chr3	+	655	5	FSM	ENSG00000008952.17	ENST00000460513.5	641	5	-14	0	-14	0	multi-exon	FALSE	canonical	1	2	junction_3	640.771556406806	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGAGTAAGCCTATAACT	-18	True	NA	NA	False	NA	NA	NA	169966786	169983253	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_169966859_169975607_169975717_169976945_169977052_169982636_169982912_169983160
H1_mix_00061917	chr3	+	6541	8	FSM	ENSG00000008952.17	ENST00000337002.9	6526	8	-15	0	-9	0	multi-exon	FALSE	canonical	3	964	junction_4	225.725406597648	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTATTTATTTTATGTAT	-13	True	NA	8	True	AATAAA	-22	NA	169966791	169998373	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_169966859_169975607_169975717_169976945_169977052_169982706_169982912_169983160_169983254_169985804_169985866_169988239_169988360_169992593
H1_mix_00061925	chr3	+	3661	6	FSM	ENSG00000163558.13	ENST00000476635.5	3650	6	-11	0	-11	0	multi-exon	FALSE	canonical	3	783	junction_3	101.705457080729	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGAGTGGATCATTTTTC	5123	False	NA	54	True	AATAAA	-15	NA	170291630	170305977	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_170291942_170293382_170293509_170295910_170295991_170297303_170297394_170298994_170299111_170303039
H1_mix_00061930	chr3	+	9371	6	FSM	ENSG00000136603.14	ENST00000413427.6	2702	6	-2327	-4342	-382	0	multi-exon	FALSE	canonical	0	0	junction_1	101.922323364413	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATTCAAGTTATTTCAG	-1	True	NA	20	True	AATAAA	-21	NA	170357295	170396835	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_170361430_170381243_170381342_170384532_170384628_170390222_170390465_170391035_170391261_170392258
H1_mix_00061931	chr3	+	7155	7	FSM	ENSG00000136603.14	ENST00000259119.9	7155	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	77.2997412673548	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATTCAAGTTATTTCAG	24	True	NA	20	True	AATAAA	-21	NA	170357714	170396835	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_170357764_170359698_170361430_170381243_170381342_170384532_170384766_170390222_170390465_170391035_170391261_170392258
H1_mix_00061932	chr3	+	8296	6	FSM	ENSG00000136603.14	ENST00000458537.7	7182	6	-1114	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	83.7510596947883	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATTCAAGTTATTTCAG	43	False	NA	20	True	AATAAA	-21	NA	170358508	170396835	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_170361430_170381243_170381342_170384532_170384766_170390222_170390465_170391035_170391261_170392258
H1_mix_00061939	chr3	+	7914	26	FSM	ENSG00000075420.13	ENST00000336824.8	7904	26	0	-10	0	6	multi-exon	TRUE	canonical	3	37	junction_1	20.870112601517	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGATTTTAGATTGTCT	26	False	NA	NA	False	AATAAA	-28	NA	172040553	172401675	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_172040625_172112451_172112591_172133470_172133547_172226870_172226948_172247532_172247777_172251259_172251542_172285925_172285985_172295362_172295515_172298727_172298788_172307362_172307502_172310827_172310882_172328951_172329077_172330540_172330716_172333088_172333176_172334943_172335083_172337329_172337402_172341112_172341232_172343010_172343117_172344085_172344259_172346326_172346441_172347211_172347362_172352802_172353084_172362632_172362846_172378269_172378437_172380965_172381094_172397163
H1_mix_00061942	chr3	+	4087	24	FSM	ENSG00000114346.14	ENST00000232458.9	4087	24	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	104.778982437703	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGTCTCATGTATTAA	NA	False	NA	19	True	AATAAA	-20	NA	172750681	172821474	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_172750858_172754508_172754661_172755294_172755375_172756982_172757166_172758979_172759070_172760155_172760264_172761609_172761684_172762415_172762547_172762690_172762807_172762909_172762973_172764277_172764501_172769006_172769144_172773902_172774023_172782162_172782232_172783798_172783910_172784706_172784804_172786492_172786575_172802615_172802695_172802860_172802981_172805730_172805870_172807769_172807925_172815603_172815712_172816690_172816838_172820147
H1_mix_00061943	chr3	+	4136	25	FSM	ENSG00000114346.14	ENST00000392692.8	4136	25	0	0	0	0	multi-exon	FALSE	canonical	3	383	junction_18	61.0188950699335	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGTCTCATGTATTAA	-28	True	NA	19	True	AATAAA	-20	NA	172750725	172821474	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_172750858_172754508_172754661_172755294_172755375_172755482_172755576_172756982_172757166_172758979_172759070_172760155_172760264_172761609_172761684_172762415_172762547_172762690_172762807_172762909_172762973_172764277_172764501_172769006_172769144_172773902_172774023_172782162_172782232_172783798_172783910_172784706_172784804_172786492_172786575_172802615_172802695_172802860_172802981_172805730_172805870_172807769_172807925_172815603_172815712_172816690_172816838_172820147
H1_mix_00061947	chr3	+	2266	8	FSM	ENSG00000114346.14	ENST00000437296.1	2266	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_6	210.257956242482	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATGTCTCATGTATTA	NA	False	NA	18	True	AATAAA	-19	NA	172802690	172821473	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_172802695_172802860_172802981_172805730_172805870_172807769_172807925_172815603_172815712_172816690_172816838_172818547_172818815_172820147
H1_mix_00061949	chr3	+	8748	6	FSM	ENSG00000169760.17	ENST00000361589.8	5092	6	-135	-3521	-135	0	multi-exon	FALSE	canonical	3	23	junction_1	10.1390334845093	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGTTGACTATTTTTAA	NA	False	NA	15	True	AATAAA	-19	NA	173584419	174286644	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_173585035_173604278_173605092_173807679_173807833_174275314_174275528_174278860_174279651_174280480
H1_mix_00061951	chr3	+	5962	6	FSM	ENSG00000121864.10	ENST00000496856.6	5962	6	0	0	0	0	multi-exon	TRUE	canonical	3	111	junction_1	64.8123445031886	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATGACTTAATCCTGGC	2	True	NA	13	True	ATTAAA	-17	NA	179323030	179338583	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_179323292_179327560_179327632_179328282_179328352_179329617_179329729_179332988_179333124_179333268
H1_mix_00061957	chr3	+	640	6	FSM	ENSG00000136518.17	ENST00000468767.6	622	6	-18	0	-15	0	multi-exon	FALSE	canonical	2	2	junction_5	402.130327132884	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTTTAGTGCCAGGTGA	NA	False	NA	NA	False	NA	NA	NA	179562904	179575488	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_179562974_179569823_179569901_179570066_179570242_179573368_179573470_179574369_179574502_179575402
H1_mix_00061959	chr3	+	1730	14	FSM	ENSG00000136518.17	ENST00000450518.6	1750	14	20	0	-14	0	multi-exon	FALSE	canonical	3	86	junction_1	214.32787469161	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGACTGTTGTGCACTG	NA	False	NA	13	True	AATAAA	-23	NA	179562905	179588407	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_179562974_179569823_179569901_179570066_179570242_179573368_179573470_179574369_179574468_179576216_179576312_179576619_179576727_179576823_179576914_179580639_179580702_179580893_179581009_179581139_179581221_179583352_179583449_179586545_179586633_179587929
H1_mix_00061964	chr3	+	1078	6	FSM	ENSG00000136521.13	ENST00000359944.10	1054	6	-24	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	383.39087104416	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGCTTTCATGGTTTTTT	-14	True	NA	14	True	AATAAA	-32	NA	179604786	179624500	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_179604940_179614951_179615060_179615982_179616050_179616982_179617045_179618414_179618522_179623919
H1_mix_00061965	chr3	+	4205	6	FSM	ENSG00000136521.13	ENST00000259037.8	4199	6	-7	1	0	-1	multi-exon	FALSE	canonical	3	820	junction_1	87.6994868856141	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGGTCTCTCTGATTCCTT	-14	True	NA	7	True	AATAAA	-17	NA	179604786	179627646	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_179604940_179614970_179615060_179615982_179616050_179616982_179617045_179618414_179618522_179623919
H1_mix_00061966	chr3	+	4049	4	FSM	ENSG00000136521.13	ENST00000493866.5	4046	4	-4	1	0	-1	multi-exon	FALSE	canonical	3	167	junction_1	406.276588873475	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGGTCTCTCTGATTCCTT	-14	True	NA	7	True	AATAAA	-17	NA	179604786	179627646	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_179604940_179616982_179617045_179618414_179618522_179623919
H1_mix_00061972	chr3	+	2292	13	FSM	ENSG00000163728.11	ENST00000382584.8	2274	13	-18	0	0	0	multi-exon	FALSE	canonical	3	25	junction_10	20.7598704770098	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTAGGTGTACATTATTT	-1	True	NA	12	True	AATAAA	-23	NA	180602192	180617828	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_180602423_180602890_180603016_180603123_180603324_180604224_180604310_180604477_180604608_180604851_180605008_180605765_180605838_180606252_180606373_180606480_180606604_180607647_180607766_180608700_180608811_180609629_180610004_180617379
H1_mix_00061975	chr3	+	2138	15	FSM	ENSG00000114416.18	ENST00000472339.5	2130	15	-8	0	0	0	multi-exon	FALSE	canonical	3	360	junction_14	95.8452462279157	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATTTTGTTTTCAAAAT	0	True	NA	24	True	ATTAAA	-24	NA	180912669	180976553	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_180912737_180933333_180933387_180935137_180935232_180947864_180947937_180948346_180948496_180948720_180948815_180949226_180949344_180951297_180951469_180953761_180953841_180957818_180957929_180961467_180961555_180962882_180963091_180968050_180968255_180970157_180970359_180976121
H1_mix_00061976	chr3	+	2653	16	FSM	ENSG00000114416.18	ENST00000445140.6	2651	16	-2	0	0	0	multi-exon	FALSE	canonical	3	360	junction_15	92.5955122502645	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGAATTTTTTTAACTTT	0	True	NA	6	True	AATAAA	-16	NA	180912669	180977155	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_180912737_180933333_180933387_180935137_180935232_180947864_180947937_180948346_180948496_180948720_180948815_180949226_180949344_180951297_180951469_180953761_180953841_180957818_180957929_180961467_180961555_180962882_180962941_180963027_180963091_180968050_180968255_180970157_180970359_180976121
H1_mix_00061977	chr3	+	8343	17	FSM	ENSG00000114416.18	ENST00000357559.9	8343	17	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_15	132.809176429003	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTGATCCTCATTATT	0	True	NA	NA	False	AATAAA	-18	NA	180912669	180982753	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_180912737_180933333_180933387_180935137_180935232_180947864_180947937_180948346_180948496_180948720_180948815_180949226_180949344_180951297_180951469_180953761_180953841_180957818_180957929_180961467_180961555_180962882_180962941_180963027_180963091_180968050_180968255_180970157_180970359_180975312_180975405_180976121
H1_mix_00061981	chr3	+	2019	3	FSM	ENSG00000242808.11	ENST00000646296.2	2094	3	75	0	75	0	multi-exon	FALSE	canonical	1	1	junction_1	8.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTACATTATAATTGTTTT	1539	False	NA	NA	False	AAAAAG	-42	NA	181711176	181741290	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_181711366_181715184_181715293_181739568
H1_mix_00061987	chr3	+	1241	4	FSM	ENSG00000240024.6	ENST00000686765.1	1667	4	34	392	2	84	multi-exon	FALSE	canonical	3	123	junction_1	27.8567765543682	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAATT	-12	True	NA	NA	False	NA	NA	NA	183447650	183455625	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_183447948_183452077_183452513_183454011_183454094_183455198
H1_mix_00061988	chr3	+	3598	2	FSM	ENSG00000253092.1_ENSG00000240024.6_ENSG00000201229.1	ENST00000482098.1	794	2	-2332	-472	-430	0	multi-exon	FALSE	canonical	3	189	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTTGGTCCTTATTCCT	3648	False	NA	25	True	AATAAA	-27	NA	183451310	183456013	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_183454094_183455198
H1_mix_00061989	chr3	+	214	1	FSM	ENSG00000251730.1	ENST00000515921.1	135	1	24	-103	24	103	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGCTTAATGCAACTTTTT	6489	False	NA	NA	False	NA	NA	NA	183454151	183454365	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_183454200_183454400
H1_mix_00061992	chr3	+	7226	7	NIC	ENSG00000114796.16	novel	7380	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	33.9578987702256	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGACTATATGGTTGT	-15	True	NA	5	True	AATAAA	-18	NA	183635622	183684477	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_183635794_183650295_183651277_183663457_183663643_183664920_183665040_183671033_183671223_183672295_183672485_183679085
H1_mix_00061993	chr3	+	7388	9	FSM	ENSG00000114796.16	ENST00000454652.6	7380	9	-8	0	-4	0	multi-exon	FALSE	canonical	3	19	junction_1	42.0027900858979	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGACTATATGGTTGT	-23	True	NA	5	True	AATAAA	-18	NA	183635614	183684477	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_183635794_183636220_183636312_183643479_183643543_183650295_183651277_183663457_183663643_183664920_183665040_183671033_183671223_183672295_183672485_183679085
H1_mix_00061997	chr3	+	1024	5	FSM	ENSG00000163872.16	ENST00000432781.1	1024	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	71.4807666439022	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATACCTTGTCTGTTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	183775990	183793486	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_183776124_183777541_183777701_183786124_183786302_183790796_183790981_183793115
H1_mix_00061998	chr3	+	5725	5	FSM	ENSG00000163872.16	ENST00000472593.1	5737	5	12	0	12	0	multi-exon	FALSE	canonical	3	183	junction_1	4.71036092035419	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGGTGTTTCTGAGTTTG	NA	False	NA	30	True	AATAAA	-16	NA	183800988	183812623	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_183804189_183806865_183807093_183808029_183808105_183809096_183809171_183810474
H1_mix_00061999	chr3	+	3084	15	FSM	ENSG00000145191.15	ENST00000649814.1	3084	15	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_9	76.0080889895065	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTCTGCTGCTTGTATA	13	False	NA	-33	True	NA	NA	NA	184135336	184145263	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184135581_184136611_184136737_184137619_184137806_184137897_184138076_184138165_184138247_184140079_184140158_184140417_184140731_184141924_184142071_184142236_184142395_184142501_184142604_184142778_184142887_184143051_184143143_184143441_184144225_184144596_184144708_184144883
H1_mix_00062014	chr3	+	2543	21	FSM	ENSG00000161204.12	ENST00000429586.7	2446	21	-100	3	4	0	multi-exon	TRUE	canonical	3	371	junction_12	21.251529356731	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCCTTTGCCTCATGTCT	2202	False	NA	15	True	ATTAAA	-12	NA	184186098	184194002	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184186281_184186506_184186655_184186795_184186876_184187396_184187444_184187663_184187762_184187860_184187984_184188140_184188408_184188760_184188842_184188928_184188989_184189087_184189145_184189254_184189278_184189387_184189444_184189556_184189758_184189854_184189932_184190998_184191044_184191122_184191256_184192600_184192690_184192804_184192897_184193101_184193235_184193364_184193453_184193539
H1_mix_00062017	chr3	+	440	3	FSM	ENSG00000145198.15	ENST00000493493.1	804	3	364	0	364	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGACTCGGGAGGTGGA	NA	False	NA	NA	False	NA	NA	NA	184240790	184241404	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184240929_184241023_184241108_184241186
H1_mix_00062025	chr3	+	2919	21	FSM	ENSG00000175166.17	ENST00000310118.9	2913	21	-6	0	0	0	multi-exon	FALSE	canonical	3	2671	junction_8	281.674541803124	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTCTCTGTGTCTGTTTT	-7	True	NA	24	True	AATAAA	-16	NA	184299234	184309050	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184299402_184299850_184299908_184300279_184300445_184301536_184301659_184301846_184302072_184302369_184302529_184302678_184302824_184303001_184303063_184303319_184303467_184303642_184303750_184303946_184304075_184304303_184304392_184305767_184305931_184306053_184306156_184306349_184306496_184306750_184306835_184307356_184307526_184307613_184307709_184307889_184308017_184308448_184308568_184308707
H1_mix_00062033	chr3	+	5568	33	FSM	ENSG00000114867.22	ENST00000414031.5	5569	33	0	1	0	1	multi-exon	FALSE	canonical	3	109	junction_3	443.070147125077	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCACTGCCTTTCTGCTT	NA	False	NA	22	True	ATTAAA	-15	NA	184314501	184335352	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184314675_184315488_184315546_184315762_184315857_184316071_184316219_184317320_184317498_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323407_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268_184325374_184325479_184325640_184325850_184325952_184326526_184326630_184326880_184326984_184327215_184327449_184327585_184327705_184327829_184328003_184328630_184328757_184328908_184328991_184331265_184331365_184331471_184331607_184331727_184331810_184331945_184332087_184334726
H1_mix_00062037	chr3	+	5464	33	NIC	ENSG00000114867.22	novel	5405	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	643	junction_14	375.862278166402	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGCCTTTCTGCTTT	-27	True	NA	23	True	ATTAAA	-16	NA	184314549	184335353	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_184314675_184315488_184315546_184315762_184315857_184316131_184316219_184317320_184317498_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323404_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268_184325374_184325479_184325640_184325850_184325952_184326526_184326630_184326880_184326984_184327215_184327449_184327585_184327705_184327829_184328003_184328630_184328757_184328908_184328991_184331265_184331365_184331471_184331607_184331727_184331810_184331945_184332087_184334726
H1_mix_00062040	chr3	+	5405	33	FSM	ENSG00000114867.22	ENST00000346169.7	5405	33	0	0	0	0	multi-exon	FALSE	canonical	3	1336	junction_14	315.943601573129	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGCCTTTCTGCTTT	29	True	NA	23	True	ATTAAA	-16	NA	184314605	184335353	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184314675_184315488_184315546_184315762_184315857_184316131_184316219_184317320_184317498_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323407_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268_184325374_184325479_184325640_184325850_184325952_184326526_184326630_184326880_184326984_184327215_184327449_184327585_184327705_184327829_184328003_184328630_184328757_184328908_184328991_184331265_184331365_184331471_184331607_184331727_184331810_184331945_184332087_184334726
H1_mix_00062041	chr3	+	5669	32	FSM	ENSG00000114867.22	ENST00000342981.8	5667	32	-2	0	0	0	multi-exon	FALSE	canonical	3	643	junction_13	379.746528092536	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTTCTGCTTTATGCC	-12	True	NA	28	True	ATTAAA	-21	NA	184315163	184335358	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184315546_184315762_184315857_184316131_184316219_184317320_184317498_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323404_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268_184325374_184325479_184325640_184325850_184325952_184326526_184326630_184326880_184326984_184327215_184327449_184327585_184327705_184327829_184328003_184328630_184328757_184328908_184328991_184331265_184331365_184331471_184331607_184331727_184331810_184331945_184332087_184334726
H1_mix_00062051	chr3	+	1802	6	FSM	ENSG00000163882.10	ENST00000456318.6	1807	6	8	-3	-5	1	multi-exon	FALSE	canonical	3	34	junction_1	290.389118253422	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGGTGTATTGTTTC	-33	True	NA	16	True	AAAAAG	-32	NA	184361717	184368594	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184362147_184362872_184363566_184364965_184365050_184365132_184365227_184366716_184366801_184368176
H1_mix_00062053	chr3	+	1159	4	FSM	ENSG00000163882.10	ENST00000430783.5	1159	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	342.341285204627	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTGTGGTGTATTGTTT	1	True	NA	15	True	AAAAAG	-31	NA	184363001	184368593	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184363566_184364965_184365050_184365132_184365227_184368176
H1_mix_00062054	chr3	+	873	5	ISM	ENSG00000163882.10	ENST00000455712.5	823	6	755	-304	9	0	3prime_fragment	FALSE	canonical	3	669	junction_4	69.2833854542343	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTGTGGTGTATTGT	11	False	NA	13	True	AAAAAG	-29	NA	184363369	184368591	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_184363566_184364965_184365050_184365132_184365227_184366716_184366801_184368176
H1_mix_00062055	chr3	+	878	5	FSM	ENSG00000163882.10	ENST00000429568.1	878	5	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_4	307.53079114131	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGGTGTATTGTTTCTG	3	True	NA	18	True	AAAAAG	-34	NA	184363433	184368596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184363566_184364965_184365050_184365132_184365227_184366716_184366801_184368112
H1_mix_00062059	chr3	+	2926	3	FSM	ENSG00000272970.4	ENST00000665864.1	2300	3	15	-641	15	641	multi-exon	FALSE	canonical	3	13	junction_1	5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTCAAATCACATTTATAG	2736	False	NA	NA	False	NA	NA	NA	184715579	184740745	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184716175_184737551_184737772_184738634
H1_mix_00062071	chr3	+	1643	3	FSM	ENSG00000073803.14	ENST00000454237.1	526	3	46	-1163	46	1	multi-exon	FALSE	canonical	3	22	junction_1	151.5	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCACTTGCTGTTCTTTCT	94	False	NA	19	True	AATAAA	-25	NA	185283071	185293080	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_185283120_185285516_185285644_185291612
H1_mix_00062072	chr3	+	3239	17	NIC	ENSG00000163904.13	novel	878	7	NA	NA	9	696	combination_of_known_junctions	FALSE	canonical	3	160	junction_1	31.6955734291084	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATGCTGAAATGATTTC	6	True	NA	29	True	AATAAA	-26	NA	185582504	185631101	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_185582818_185590113_185590170_185598411_185598546_185598957_185599025_185600764_185600856_185606329_185606499_185609246_185609351_185611650_185611746_185612606_185612659_185613344_185613409_185614563_185614741_185617479_185617612_185619298_185619503_185621825_185621906_185623997_185624083_185626297_185626394_185629781
H1_mix_00062074	chr3	+	5596	17	FSM	ENSG00000163904.13	ENST00000296257.10	5596	17	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	43.3777016449696	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTTTCACTTGTTTTTT	-9	True	NA	8	True	AATAAA	-18	NA	185586294	185633551	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_185586515_185590113_185590170_185598411_185598546_185598957_185599025_185600764_185600856_185606329_185606499_185609246_185609351_185611650_185611746_185612606_185612659_185613344_185613409_185614563_185614741_185617479_185617612_185619298_185619503_185621825_185621906_185623997_185624083_185626297_185626394_185629781
H1_mix_00062079	chr3	+	5230	9	FSM	ENSG00000090520.12	ENST00000495390.2	5230	9	0	0	0	0	multi-exon	FALSE	canonical	3	853	junction_5	58.7312470070234	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGACTCCTGTTTCTTC	-6	True	NA	31	True	AATACA	-17	NA	186570699	186585793	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_186570966_186572094_186572252_186575839_186575938_186577667_186581514_186581994_186582078_186582715_186582774_186583864_186583977_186584429_186584590_186585343
H1_mix_00062080	chr3	+	329	1	FSM	ENSG00000283390.1	ENST00000538831.3	225	1	-16	-88	-16	88	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAAACATCAGGAGCAAT	NA	False	NA	NA	False	AATATA	-43	NA	186596959	186597288	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_186597000_186597300
H1_mix_00062085	chr3	+	1982	12	FSM	ENSG00000156976.17	ENST00000425053.5	1977	12	-5	0	0	0	multi-exon	FALSE	canonical	3	122	junction_11	564.882844578567	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATTCACTTTAAAGGTG	-7	True	NA	14	True	AATAAA	-3	NA	186783571	186789881	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_186783640_186784431_186784478_186784563_186784697_186784961_186785102_186785882_186786052_186786163_186786274_186786501_186786646_186787126_186787265_186787494_186787585_186787802_186787883_186788309_186788417_186789124
H1_mix_00062086	chr3	+	1891	11	FSM	ENSG00000156976.17	ENST00000323963.10	1886	11	-5	0	0	0	multi-exon	FALSE	canonical	3	1268	junction_4	237.798990746386	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTTTGGTCATTTTAT	-7	True	NA	30	True	AATAAA	-19	NA	186783571	186789897	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_186783640_186784431_186784478_186784563_186784697_186784961_186785102_186785882_186786052_186786163_186786274_186786501_186786646_186787126_186787265_186787494_186787585_186787802_186787883_186789124
H1_mix_00062087	chr3	+	1894	11	FSM	ENSG00000156976.17	ENST00000440191.6	1889	11	-5	0	0	0	multi-exon	FALSE	canonical	3	501	junction_1	409.603222643572	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTTTGGTCATTTTAT	-7	True	NA	30	True	AATAAA	-19	NA	186783571	186789897	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_186783640_186784428_186784478_186784563_186784697_186784961_186785102_186785882_186786052_186786163_186786274_186786501_186786646_186787126_186787265_186787494_186787585_186787802_186787883_186789124
H1_mix_00062088	chr3	+	1751	10	FSM	ENSG00000156976.17	ENST00000426808.5	1751	10	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_3	438.191851550702	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTTTGGTCATTTTAT	-7	True	NA	30	True	AATAAA	-19	NA	186783571	186789897	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_186783640_186784431_186784478_186784563_186784697_186785882_186786052_186786163_186786274_186786501_186786646_186787126_186787265_186787494_186787585_186787802_186787883_186789124
H1_mix_00062089	chr3	+	2665	11	ISM	ENSG00000156976.17	ENST00000425053.5	1977	12	20	0	0	0	intron_retention	FALSE	canonical	3	462	junction_10	416.99827337772	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATTCACTTTAAAGGTG	18	False	NA	14	True	AATAAA	-3	NA	186783596	186789881	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_186783640_186784431_186784478_186784563_186784697_186784961_186785102_186785882_186786052_186786163_186786274_186786501_186786646_186787126_186787265_186787494_186787585_186787802_186787883_186788309
H1_mix_00062090	chr3	+	1791	11	NIC	ENSG00000156976.17	novel	1977	12	NA	NA	26	0	combination_of_known_junctions	FALSE	canonical	3	122	junction_10	657.151276343583	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATTCACTTTAAAGGTG	44	False	NA	14	True	AATAAA	-3	NA	186783622	186789881	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_186783640_186784431_186784478_186784563_186784697_186785882_186786052_186786163_186786274_186786501_186786646_186787126_186787265_186787494_186787585_186787802_186787883_186788309_186788417_186789124
H1_mix_00062099	chr3	+	502	4	FSM	ENSG00000145012.14	ENST00000414139.5	502	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	17.2046505340853	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGATGAAGAGGCTTTCAA	-1	True	NA	NA	False	NA	NA	NA	188153930	188484677	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_188154022_188225404_188225528_188406111_188406314_188484591
H1_mix_00062109	chr3	+	835	1	FSM	ENSG00000238077.1	ENST00000457517.1	888	1	180	-127	180	127	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTTATTTTTATTAGAAG	1793	False	NA	NA	False	AATAAA	-41	NA	190166943	190167778	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_190166900_190167800
H1_mix_00062112	chr3	+	8640	12	FSM	ENSG00000152492.15	ENST00000392455.9	8629	12	0	-11	0	11	multi-exon	FALSE	canonical	3	15	junction_5	96.9783992307327	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTAGCTTTGTTTTGTGT	7	True	NA	13	True	AATAAA	-26	NA	191329393	191398670	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_191329724_191357087_191357151_191357997_191358125_191361068_191361160_191369918_191370037_191375061_191375590_191380158_191380275_191380686_191380732_191380827_191380933_191382745_191382826_191389495_191389603_191391740
H1_mix_00062117	chr3	+	6328	29	FSM	ENSG00000198836.11	ENST00000361828.7	6328	29	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_5	74.8616410862228	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTGCCAAGGCTGTCA	6	True	NA	17	True	TATAAA	-19	NA	193593143	193697811	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_193593410_193614722_193615042_193615673_193615771_193617177_193617286_193618868_193618937_193631611_193631666_193635417_193635523_193637194_193637282_193637951_193638066_193642764_193642846_193642974_193643050_193643372_193643445_193643527_193643628_193643974_193644106_193645552_193645626_193645727_193645801_193647064_193647181_193648069_193648135_193648794_193648872_193654861_193655028_193657079_193657233_193658886_193658996_193659481_193659562_193662821_193662963_193664879_193664997_193666295_193666390_193667169_193667281_193692062_193692133_193694605
H1_mix_00062118	chr3	+	6397	30	FSM	ENSG00000198836.11	ENST00000361908.8	6397	30	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_5	62.6130558919877	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTGCCAAGGCTGTCA	-37	True	NA	17	True	TATAAA	-19	NA	193593185	193697811	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_193593410_193614722_193615042_193615673_193615771_193617177_193617286_193618868_193618937_193626091_193626203_193631611_193631666_193635417_193635523_193637194_193637282_193637951_193638066_193642764_193642846_193642974_193643050_193643372_193643445_193643527_193643628_193643974_193644106_193645552_193645626_193645727_193645801_193647064_193647181_193648069_193648135_193648794_193648872_193654861_193655028_193657079_193657233_193658886_193658996_193659481_193659562_193662821_193662963_193664879_193664997_193666295_193666390_193667169_193667281_193692062_193692133_193694605
H1_mix_00062119	chr3	+	6451	31	FSM	ENSG00000198836.11	ENST00000361510.8	6429	31	-22	0	0	0	multi-exon	FALSE	canonical	3	79	junction_5	107.024197679258	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTGCCAAGGCTGTCA	-37	True	NA	17	True	TATAAA	-19	NA	193593185	193697811	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_193593410_193614722_193615042_193615673_193615771_193617177_193617286_193617783_193617838_193618868_193618937_193626091_193626203_193631611_193631666_193635417_193635523_193637194_193637282_193637951_193638066_193642764_193642846_193642974_193643050_193643372_193643445_193643527_193643628_193643974_193644106_193645552_193645626_193645727_193645801_193647064_193647181_193648069_193648135_193648794_193648872_193654861_193655028_193657079_193657233_193658886_193658996_193659481_193659562_193662821_193662963_193664879_193664997_193666295_193666390_193667169_193667281_193692062_193692133_193694605
H1_mix_00062120	chr3	+	6080	31	FSM	ENSG00000198836.11	ENST00000643329.1	6068	31	-12	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	153.505588027132	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATTATAATTCTATTATT	-7	True	NA	10	True	ATTAAA	-13	NA	193593215	193697523	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_193593410_193603499_193603558_193614722_193615042_193615673_193615771_193617177_193617286_193617783_193617838_193618868_193618937_193631611_193631666_193635417_193635523_193637194_193637282_193637951_193638066_193642764_193642846_193642974_193643050_193643372_193643445_193643527_193643628_193643974_193644106_193645552_193645626_193645727_193645801_193647064_193647181_193648069_193648135_193648794_193648872_193654861_193655028_193657079_193657233_193658886_193658996_193659481_193659562_193662821_193662963_193664879_193664997_193666295_193666390_193667169_193667281_193692062_193692133_193694605
H1_mix_00062127	chr3	+	663	3	FSM	ENSG00000231770.7	ENST00000419571.1	663	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTACTGATAATAACTGAAT	262	False	NA	NA	False	AATAAA	-20	NA	194584298	194590249	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_194584449_194589024_194589143_194589854
H1_mix_00062130	chr3	+	232	1	FSM	ENSG00000236844.1	ENST00000454858.1	474	1	279	-37	279	37	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACTCTAATAATAAGAAGAA	NA	False	NA	NA	False	AATAAA	-12	NA	195554888	195555120	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_195554900_195555100
H1_mix_00062134	chr3	+	2144	14	FSM	ENSG00000242086.8	ENST00000429897.5	2131	14	-13	0	-10	0	multi-exon	FALSE	canonical	3	27	junction_13	27.4482838083489	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGGTGAAAGTAG	NA	False	NA	NA	False	AATAAA	-11	NA	195658051	195688862	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_195658166_195661755_195661842_195662570_195662734_195664085_195664251_195666065_195666215_195668518_195668642_195671131_195671301_195672483_195672680_195673817_195673988_195677726_195677849_195681189_195681302_195681535_195681667_195683751_195683866_195688532
H1_mix_00062136	chr3	+	4220	14	FSM	ENSG00000242086.8	ENST00000445430.5	4208	14	-12	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	29.8118359402801	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTTTATTTCCAAATC	-3	True	NA	14	True	AATAAA	-16	NA	195658064	195686140	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_195658166_195661755_195661842_195662570_195662734_195663623_195663768_195664085_195664251_195666065_195666215_195668518_195668642_195671131_195671301_195672483_195672680_195673817_195673988_195677726_195677849_195681189_195681302_195681535_195681667_195683751
H1_mix_00062137	chr3	+	2655	12	NIC	ENSG00000215837.7	novel	2001	15	NA	NA	0	1047	intron_retention	FALSE	canonical	1	7	junction_11	32.0776434080119	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGCAGAGCATTACTGTG	28	False	NA	NA	False	NA	NA	NA	195658095	195686951	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_195658166_195664085_195664251_195666065_195666215_195668518_195668642_195671131_195671301_195672483_195672680_195673817_195673988_195677726_195677849_195681189_195681302_195681535_195681667_195683751_195683866_195685817
H1_mix_00062138	chr3	+	4225	4	ISM	ENSG00000242086.8	ENST00000628547.2	882	6	-1545	7468	-610	-69	5prime_fragment	FALSE	canonical	2	9	junction_3	7.58653778449403	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTGTGAGCGCTGTCAT	920	False	NA	16	True	AATAAA	-35	NA	195687210	195701338	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_195688798_195689338_195689439_195696360_195696590_195699029
H1_mix_00062141	chr3	+	2055	5	FSM	ENSG00000163959.10	ENST00000484407.5	1066	5	-125	-864	-125	864	multi-exon	TRUE	canonical	3	24	junction_1	3.57071421427143	130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGGCAAGAAGAGCAAAACT	NA	False	NA	NA	False	NA	NA	NA	196227815	196234294	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_196228274_196228808_196228921_196229914_196230062_196232418_196232525_196233062
H1_mix_00062159	chr3	+	7078	9	FSM	ENSG00000122068.13	ENST00000241502.9	6733	9	-331	-14	-1	14	multi-exon	FALSE	canonical	3	241	junction_4	18.9962989816438	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCTAACACTGAATAACCT	124	False	NA	27	True	AATAAA	-31	NA	197749551	197787610	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_197750075_197756425_197756558_197768438_197768588_197770131_197770245_197773402_197773500_197774148_197774211_197776926_197777002_197778337_197778465_197781810
H1_mix_00062173	chr3	+	492	5	FSM	ENSG00000182899.17	ENST00000429437.5	442	5	-16	-34	0	0	multi-exon	FALSE	canonical	3	51	junction_3	5802.8209949989	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTTGCTACATGCTTAA	0	True	NA	48	True	ATTAAA	-18	NA	197950189	197955851	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_197950222_197950935_197950979_197951158_197951329_197954002_197954148_197955749
H1_mix_00062178	chr3	-	2038	10	FSM	ENSG00000113851.16	ENST00000424814.5	2038	10	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	120.336359867551	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTCTTTGTTCAAATAA	21	False	NA	NA	False	AGTAAA	-20	NA	3179674	3150010	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_3151046_3153423_3153489_3153959_3154076_3154746_3154832_3156218_3156282_3167633_3167794_3172775_3172926_3174058_3174262_3175162_3175270_3179620
H1_mix_00062179	chr3	-	2187	11	FSM	ENSG00000113851.16	ENST00000231948.9	2187	11	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_4	70.7321708983967	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTCTTTGTTCAAATAA	4	True	NA	NA	False	AGTAAA	-20	NA	3179691	3150010	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_3151046_3152455_3152588_3153423_3153489_3153959_3154076_3154746_3154832_3156218_3156282_3167633_3167794_3172775_3172926_3174058_3174262_3175162_3175270_3179620
H1_mix_00062180	chr3	-	2203	11	FSM	ENSG00000113851.16	ENST00000432408.6	2203	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_10	103.93387320792	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTCTTTGTTCAAATAA	NA	False	NA	NA	False	AGTAAA	-20	NA	3179710	3150010	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_3151046_3152455_3152588_3153423_3153489_3153959_3154076_3154746_3154832_3156218_3156282_3167633_3167794_3172775_3172926_3174058_3174262_3175162_3175267_3179620
H1_mix_00062181	chr3	-	885	5	FSM	ENSG00000113851.16	ENST00000450014.1	878	5	0	-7	0	7	multi-exon	FALSE	canonical	3	262	junction_1	63.4113554499508	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCTTGTTATTATGCTTA	21	False	NA	-1	True	AATAAA	-20	NA	3179674	3167422	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_3167794_3172775_3172926_3174058_3174262_3175162_3175270_3179620
H1_mix_00062182	chr3	-	1059	5	FSM	ENSG00000113851.16	ENST00000498700.5	1012	5	0	-47	0	47	multi-exon	FALSE	canonical	3	82	junction_1	141.088624630053	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTCATTTTGACAAAGCT	-6	True	NA	28	True	NA	NA	NA	3179701	3172128	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_3172647_3172775_3172926_3174058_3174262_3175162_3175270_3179620
H1_mix_00062183	chr3	-	999	3	Intergenic	novelGene_874	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTGAAAATTAAAGGAAAAT	NA	False	NA	NA	False	NA	NA	NA	4353523	4317643	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_4318607_4350257_4350271_4353500
H1_mix_00062184	chr3	-	2158	9	FSM	ENSG00000144455.14	ENST00000272902.10	2147	9	0	-11	0	11	multi-exon	FALSE	canonical	3	170	junction_6	20.1117969112658	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCTTCTTTTCTCTTTCT	-10	True	NA	-2	True	AATAAA	-30	NA	4467269	4361134	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_4362255_4376329_4376390_4410864_4410979_4417127_4417243_4418009_4418133_4420063_4420147_4449265_4449341_4452875_4453050_4466975
H1_mix_00062185	chr3	-	1447	8	FSM	ENSG00000144455.14	ENST00000383843.9	1447	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	67.7546594526976	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGATGGACAGCATGACCTC	-5	True	NA	NA	False	AATGAA	-1	NA	4467264	4361765	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_4362255_4376329_4376390_4410864_4410979_4417127_4417243_4418009_4418133_4420063_4420147_4452875_4453050_4466975
H1_mix_00062186	chr3	-	1124	8	FSM	ENSG00000144455.14	ENST00000405420.2	1128	8	4	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	67.5392554031221	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTGTCTGACCTACATTGG	-10	True	NA	NA	False	NA	NA	NA	4467269	4362108	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_4362255_4410864_4410979_4417127_4417243_4418009_4418133_4420063_4420147_4449265_4449341_4452875_4453050_4466975
H1_mix_00062187	chr3	-	1202	1	FSM	ENSG00000268509.2	ENST00000600805.2	1127	1	-16	-59	-16	59	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTAGCTCAAGGAGTGCA	9410	False	NA	NA	False	NA	NA	NA	5188314	5187112	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_5187100_5188300
H1_mix_00062188	chr3	-	2629	4	FSM	ENSG00000227110.7	ENST00000420095.2	2621	4	0	-8	0	8	multi-exon	FALSE	canonical	0	0	junction_1	4.08248290463863	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAATTTGTTATTGAAGA	-1	True	NA	NA	False	AATAAA	-19	NA	8501668	8220674	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_8222720_8494680_8494767_8498549_8498850_8501470
H1_mix_00062189	chr3	-	1753	12	NIC	ENSG00000125046.16	novel	1799	12	NA	NA	108	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_11	6.06439275642106	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTACTGCCCATTCTGT	4809	False	NA	-13	True	AATAAA	-26	NA	8677244	8619399	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_8620015_8623548_8623657_8625541_8625648_8626228_8626322_8627697_8627784_8629663_8629727_8630804_8630930_8632048_8632110_8633665_8633942_8635299_8635382_8635758_8635858_8677205
H1_mix_00062190	chr3	-	5034	4	FSM	ENSG00000180914.11	ENST00000316793.8	4387	4	-655	8	-640	-8	multi-exon	FALSE	canonical	3	13	junction_2	4.32049379893857	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGAAGGCCAGCTTGAT	NA	False	NA	-12	True	AATAAA	-30	NA	8770268	8750388	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_8753225_8767265_8768330_8768495_8768592_8769230
H1_mix_00062191	chr3	-	5858	13	FSM	ENSG00000070950.10	ENST00000264926.7	5857	13	1	-2	-1	2	multi-exon	FALSE	canonical	3	108	junction_1	22.2142346755908	1723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCTAGTAAGTGCCTGT	-14	True	NA	3	True	AATAAA	-16	NA	8963471	8877072	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_8881460_8890388_8890452_8898893_8899048_8902379_8902521_8912311_8912373_8913643_8913721_8935870_8936056_8939553_8939654_8941466_8941805_8947219_8947291_8948508_8948571_8958919_8959002_8963334
H1_mix_00062192	chr3	-	451	3	FSM	ENSG00000070950.10	ENST00000429790.1	516	3	0	65	0	-65	multi-exon	FALSE	canonical	3	116	junction_1	8	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCTGTATGGATAAATT	NA	False	NA	NA	False	AAGAAA	-40	NA	8902398	8890173	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_8890452_8898893_8899048_8902379
H1_mix_00062193	chr3	-	2047	4	FSM	ENSG00000070950.10	ENST00000469793.1	592	4	0	-1455	0	1455	multi-exon	FALSE	canonical	3	156	junction_1	7.34846922834953	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CGTCTCAAAAAAAAAAAAAA	14	True	NA	NA	False	NA	NA	NA	8963443	8945496	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_8947291_8948508_8948571_8958919_8959002_8963334
H1_mix_00062194	chr3	-	3548	20	ISM	ENSG00000196220.17	ENST00000383836.8	8923	22	-14	12034	-14	3	5prime_fragment	FALSE	canonical	2	7	junction_15	6.44731471513615	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCAAGTATTTTTCCTAC	10	False	NA	-12	True	TTTAAA	-30	NA	9249660	8992624	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_8993056_8994342_8994524_9010307_9010388_9013307_9013536_9013736_9013843_9015596_9015732_9025260_9025339_9026934_9026996_9032649_9032753_9038062_9038091_9047390_9047476_9053026_9053225_9056232_9056335_9058250_9058473_9060230_9060360_9064395_9064582_9080024_9080088_9104679_9104843_9124724_9124918_9248884
H1_mix_00062196	chr3	-	793	5	FSM	ENSG00000206573.10	ENST00000521609.5	793	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	55.4182957154043	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATTTTTTTTCTCTTGG	1361	False	NA	-4	True	ATTAAA	-16	NA	9397428	9385794	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9385924_9388086_9388128_9390279_9390498_9391426_9391827_9397423
H1_mix_00062198	chr3	-	1878	3	FSM	ENSG00000206573.10	ENST00000522525.6	1878	3	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	26	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACATTTGGTTGAATCTG	1285	False	NA	-5	True	ATTAAA	-19	NA	9397504	9388848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9390498_9391678_9391827_9397423
H1_mix_00062199	chr3	-	2098	3	FSM	ENSG00000206573.10	ENST00000660363.1	2098	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	10	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAAATATTCTCAAATAT	3210	False	NA	-30	True	TATAAA	-37	NA	9395579	9388873	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9390498_9391426_9391827_9395505
H1_mix_00062200	chr3	-	1818	3	FSM	ENSG00000206573.10	ENST00000520447.1	1809	3	0	-9	0	0	multi-exon	FALSE	canonical	0	0	junction_1	75	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAAATATTCTCAAATAT	-3	True	NA	-30	True	TATAAA	-37	NA	9397495	9388873	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9390498_9391704_9391827_9397423
H1_mix_00062201	chr3	-	2179	2	FSM	ENSG00000206573.10	ENST00000469846.3	3045	2	20	846	0	0	multi-exon	FALSE	canonical	3	150	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGAGTAGCTGGAACTATA	1315	False	NA	NA	False	NA	NA	NA	9397474	9389698	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9391827_9397423
H1_mix_00062206	chr3	-	4788	4	NIC	ENSG00000156959.9	novel	4900	4	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_1	22.573337271116	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGCTGCCACTTCTCTG	62	False	NA	-1	True	AATAAA	-21	NA	9553795	9498360	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_9502312_9505966_9506204_9552273_9552763_9553684
H1_mix_00062207	chr3	-	4908	5	NNC	ENSG00000156959.9	novel	4900	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	19.8289560996034	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGCTGCCACTTCTCTG	-9	True	NA	-1	True	AATAAA	-21	NA	9553822	9498360	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_9502312_9503765_9503859_9505966_9506204_9552273_9552763_9553684
H1_mix_00062209	chr3	-	2626	9	FSM	ENSG00000171148.14	ENST00000301964.7	1974	9	-651	-1	-113	1	multi-exon	FALSE	canonical	3	293	junction_3	41.1855557204222	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCAGTCTTTGAATGTCT	NA	False	NA	-3	True	AATAAA	-28	NA	9793124	9779965	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9780550_9784027_9784214_9785315_9785426_9787005_9787110_9787198_9787341_9789508_9789615_9789712_9789964_9791259_9791494_9792215
H1_mix_00062210	chr3	-	2554	8	FSM	ENSG00000171148.14	ENST00000343450.2	2554	8	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_2	43.9103911276089	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTAATTAACTGTTAACAT	-5	True	NA	NA	False	AATAAA	-22	NA	9792736	9783127	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9784214_9785315_9785426_9787005_9787110_9787198_9787341_9789508_9789615_9789712_9789964_9791259_9791494_9792215
H1_mix_00062211	chr3	-	338	1	FSM	ENSG00000269886.1	ENST00000602768.1	336	1	0	-2	0	2	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGCTAATATTTATTGAG	NA	False	NA	NA	False	AATAAA	-26	NA	9813097	9812759	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9812800_9813100
H1_mix_00062212	chr3	-	975	4	FSM	ENSG00000156990.14	ENST00000423108.5	756	4	-64	-155	-64	155	multi-exon	FALSE	canonical	3	33	junction_1	260.820926222486	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGTCTCTACAAAAAGTACA	3324	False	NA	94	True	NA	NA	NA	9840681	9837693	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9838208_9838984_9839172_9840183_9840308_9840531
H1_mix_00062213	chr3	-	1380	9	FSM	ENSG00000156990.14	ENST00000383820.9	1225	9	0	-155	0	155	multi-exon	FALSE	canonical	3	513	junction_1	77.8488118085305	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGTCTCTACAAAAAGTACA	-11	True	NA	94	True	NA	NA	NA	9844016	9837693	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9838208_9839031_9839172_9840183_9840308_9840531_9840617_9840697_9840806_9841982_9842083_9842198_9842244_9843464_9843602_9843889
H1_mix_00062214	chr3	-	1008	2	FSM	ENSG00000156990.14	ENST00000466141.1	996	2	0	-12	0	0	multi-exon	FALSE	canonical	3	513	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGGACTTGTGATAATAAA	4292	False	NA	-94	True	NA	NA	NA	9839713	9837881	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9838208_9839031
H1_mix_00062215	chr3	-	1005	8	FSM	ENSG00000156990.14	ENST00000424438.5	1005	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	282.19489574348	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTCCTCCCTCTGTTCCT	9844	False	NA	NA	False	GGGGCT	-10	NA	9843942	9838019	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9838208_9840183_9840308_9840531_9840617_9840697_9840806_9841982_9842083_9842198_9842244_9843464_9843602_9843724
H1_mix_00062216	chr3	-	2491	4	FSM	ENSG00000156990.14	ENST00000484134.5	2491	4	0	0	0	0	multi-exon	FALSE	canonical	3	600	junction_3	64.8296914144197	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAACTGCAC	-11	True	NA	NA	False	NA	NA	NA	9844016	9839900	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9842083_9842198_9842244_9843464_9843602_9843889
H1_mix_00062217	chr3	-	3094	7	FSM	ENSG00000156990.14	ENST00000418713.5	955	7	0	-2139	0	47	multi-exon	FALSE	canonical	3	554	junction_3	68.8573404462686	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCTTACTGCTGAGTTG	3	True	NA	-14	True	AGTAAA	-14	NA	9844002	9837801	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9840308_9840531_9840617_9840697_9840806_9841982_9842083_9842198_9842244_9843464_9843602_9843889
H1_mix_00062222	chr3	-	3775	4	FSM	ENSG00000163704.12	ENST00000412055.6	3775	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	6.0184900284226	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGCTTCCCTCTGGCCA	-19	True	NA	-34	True	AATAAA	-15	NA	9952408	9945541	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9948002_9948757_9948914_9949100_9950173_9952321
H1_mix_00062223	chr3	-	4091	4	NNC	ENSG00000163704.12	novel	3775	4	NA	NA	-136	0	intron_retention	FALSE	canonical	3	28	junction_3	21.9696760710454	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGCTTCCCTCTGGCCA	NA	False	NA	-34	True	AATAAA	-15	NA	9952544	9945541	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_9948002_9948757_9948914_9949100_9950173_9952141
H1_mix_00062224	chr3	-	1475	3	FSM	ENSG00000163704.12	ENST00000411976.2	1475	3	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	5.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGGAGAAGTCATTTGCC	-1	True	NA	3	True	AATAAA	-19	NA	9952390	9948579	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9948914_9949100_9950173_9952321
H1_mix_00062225	chr3	-	2997	8	FSM	ENSG00000125037.13	ENST00000245046.7	2353	8	-423	-221	-421	221	multi-exon	FALSE	canonical	3	378	junction_7	32.859006158347	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCATCCTCCTGCCTCAC	129	False	NA	NA	False	NA	NA	NA	9987264	9962460	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9964198_9969718_9969802_9970581_9970662_9973627_9973710_9974383_9974489_9976956_9977051_9977388_9977447_9986506
H1_mix_00062226	chr3	-	1909	7	FSM	ENSG00000125037.13	ENST00000487465.5	1909	7	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_6	34.4887260162248	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTCAGCCTGATAAAGGA	-11	True	NA	NA	False	AAAAAG	-8	NA	9986838	9968643	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9969802_9970581_9970662_9973627_9973710_9974383_9974489_9976956_9977051_9977388_9977447_9986506
H1_mix_00062229	chr3	-	1107	2	FSM	ENSG00000186162.11	ENST00000445082.1	1107	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTCATTGAATTCATTAA	12	True	NA	NA	False	AAAAAG	-12	NA	10026326	10022926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_10023748_10026040
H1_mix_00062230	chr3	-	1359	9	FSM	ENSG00000157020.18	ENST00000350697.8	1359	9	0	0	0	0	multi-exon	FALSE	canonical	3	691	junction_8	118.632244246663	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCTGCGTTATCCTAA	-24	True	NA	-22	True	AATAAA	-17	NA	10321112	10300930	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_10301375_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10321049
H1_mix_00062232	chr3	-	3775	5	FSM	ENSG00000144560.16	ENST00000430365.7	3775	5	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	33.4617318738884	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTGTACGTGTGCAGTT	-1	True	NA	-2	True	AATAAA	-15	NA	11643915	11556068	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_11558828_11559331_11559456_11564796_11565020_11601832_11602023_11643436
H1_mix_00062233	chr3	-	3535	6	NIC	ENSG00000144560.16	novel	3725	6	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_5	43.4998850573194	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTGTACGTGTGCAGTT	1162	False	NA	-2	True	AATAAA	-15	NA	11719578	11556068	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_11558828_11559331_11559456_11564796_11565020_11601832_11602023_11702970_11703048_11719416
H1_mix_00062234	chr3	-	3726	6	FSM	ENSG00000144560.16	ENST00000273038.7	3725	6	0	-1	0	0	multi-exon	FALSE	canonical	3	35	junction_5	42.8924235734005	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTGTACGTGTGCAGTT	-6	True	NA	-2	True	AATAAA	-15	NA	11720746	11556068	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_11558828_11559331_11559456_11564796_11565020_11601832_11602023_11702970_11703048_11720393
H1_mix_00062235	chr3	-	1305	8	FSM	ENSG00000144559.11	ENST00000455809.6	1326	8	21	0	0	0	multi-exon	FALSE	canonical	3	98	junction_5	12.6248863401633	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTTGTTACTTTGACC	-10	True	NA	-1	True	AATAAA	-24	NA	11846864	11790441	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_11790582_11807832_11807896_11809516_11809683_11817191_11817338_11829713_11829865_11839221_11839315_11844028_11844212_11846501
H1_mix_00062236	chr3	-	1300	7	FSM	ENSG00000144559.11	ENST00000273037.9	1297	7	0	-3	0	3	multi-exon	FALSE	canonical	3	14	junction_1	40.5202281445809	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTACTTTGACCCAT	NA	False	NA	2	True	AATAAA	-27	NA	11846919	11790438	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_11790582_11809516_11809683_11817191_11817338_11829713_11829865_11839221_11839315_11844028_11844212_11846501
H1_mix_00062237	chr3	-	1440	9	NIC	ENSG00000144559.11	novel	2558	10	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_6	48.6486125187553	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTTGTTACTTTGACC	4	True	NA	-1	True	AATAAA	-24	NA	11846850	11790441	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_11790582_11807832_11807896_11809516_11809683_11817191_11817338_11829713_11829865_11833002_11833152_11839221_11839315_11844028_11844212_11846501
H1_mix_00062241	chr3	-	1194	5	FSM	ENSG00000157150.5	ENST00000287814.5	1194	5	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	4.26468052730799	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACTGTGGCTGTGTATCC	19	True	NA	-23	True	CATAAA	-31	NA	12158912	12153067	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_12153713_12154326_12154452_12156819_12156935_12157384_12157483_12158701
H1_mix_00062244	chr3	-	1831	14	ISM	ENSG00000132155.14	ENST00000685437.1	2866	17	52112	347	-4	-339	3prime_fragment	FALSE	canonical	3	49	junction_11	114.730556486561	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCTTCTGTAGATGCG	NA	False	NA	NA	False	NA	NA	NA	12612005	12584266	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_12584658_12584846_12584982_12585121_12585254_12585680_12585800_12587590_12587638_12590797_12590975_12591707_12591793_12599690_12599809_12600151_12600280_12600387_12600416_12604135_12604290_12608765_12608924_12609232_12609336_12611949
H1_mix_00062248	chr3	-	1045	1	FSM	ENSG00000213943.3	ENST00000396959.2	1279	1	317	-83	317	83	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAATAATAATAATAA	NA	False	NA	NA	False	AATAAA	-36	NA	12788354	12787309	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_12787300_12788400
H1_mix_00062249	chr3	-	510	1	FSM	ENSG00000272263.1	ENST00000606447.1	510	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCATTTTTGAAAATCACC	8829	False	NA	6	True	AATAAA	-32	NA	12832728	12832218	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_12832200_12832700
H1_mix_00062250	chr3	-	2094	4	FSM	ENSG00000144713.13	ENST00000429711.7	2094	4	0	0	0	0	multi-exon	FALSE	canonical	3	10561	junction_3	1992.09526769067	3485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACCGTTTTGAATTTTAA	-8	True	NA	-26	True	NA	NA	NA	12841565	12834484	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_12836224_12839348_12839531_12840141_12840243_12841493
H1_mix_00062251	chr3	-	1749	4	FSM	ENSG00000144713.13	ENST00000396957.5	1749	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	6921.4670089191	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGGGATTTTGTTTTT	-25	True	NA	-9	True	CATAAA	-22	NA	12841582	12834945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_12836224_12839348_12839531_12840141_12840342_12841493
H1_mix_00062252	chr3	-	1734	3	FSM	ENSG00000144713.13	ENST00000396953.6	1734	3	0	0	0	0	multi-exon	FALSE	canonical	3	14107	junction_1	565	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAAACTGCCATCTGGCA	28	True	NA	-39	True	AATAAA	-2	NA	12841529	12836059	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_12836224_12839348_12839531_12840141
H1_mix_00062253	chr3	-	1165	4	NNC	ENSG00000144713.13	novel	555	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_3	6918.17451837308	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGTAGGCAGCTCATGTG	28	True	NA	-81	True	AAGAAA	-1	NA	12841529	12836101	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_12836224_12839348_12839531_12840141_12840243_12840769
H1_mix_00062254	chr3	-	655	3	FSM	ENSG00000144713.13	ENST00000452606.2	631	3	0	-24	0	24	multi-exon	FALSE	canonical	3	10561	junction_2	2338	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTATGAAGGTGTCAAGC	14	True	NA	NA	False	NA	NA	NA	12841543	12839026	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_12839531_12840141_12840243_12841493
H1_mix_00062255	chr3	-	7567	14	FSM	ENSG00000144711.16	ENST00000613206.2	7700	14	-10	143	-10	34	multi-exon	FALSE	canonical	0	0	junction_13	30.4508528266422	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGTTGGCCAGACCCAG	-7	True	NA	25	True	NA	NA	NA	13073439	12897185	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_12901523_12902772_12902823_12908348_12908526_12909272_12909435_12911628_12911729_12913427_12913554_12915103_12915134_12915593_12915734_12920429_12920597_12922119_12922243_12924580_12924743_12935447_12936698_12941570_12941866_13072991
H1_mix_00062259	chr3	-	4481	21	NNC	ENSG00000132182.12	novel	7206	40	NA	NA	-6143	11	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_20	61.1011251942221	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCTGAGATTTCTGTCT	NA	False	NA	-10	True	AATAAA	-31	NA	13347284	13316223	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_13317782_13319071_13319156_13319229_13319326_13319762_13319980_13321584_13321836_13322192_13322340_13323308_13323433_13325794_13325932_13327216_13327438_13328770_13328947_13330459_13330635_13332292_13332385_13335453_13335613_13336786_13336919_13337836_13337918_13339853_13340034_13340235_13340299_13341747_13341884_13341995_13342124_13343174_13343304_13347089
H1_mix_00062260	chr3	-	7217	40	FSM	ENSG00000132182.12	ENST00000254508.7	7206	40	0	-11	0	11	multi-exon	FALSE	non_canonical	3	209	junction_31	30.9311763853855	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCTGAGATTTCTGTCT	10	True	NA	-10	True	AATAAA	-31	NA	13420322	13316223	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_13317782_13319071_13319156_13319229_13319326_13319762_13319980_13321584_13321836_13322192_13322340_13323308_13323433_13325794_13325932_13327216_13327438_13328770_13328947_13330459_13330635_13332292_13332385_13335453_13335613_13336786_13336919_13337836_13337918_13339853_13340034_13340235_13340299_13341747_13341884_13341995_13342124_13343174_13343304_13351878_13351981_13352079_13352185_13353553_13353661_13353914_13354108_13358221_13358396_13360269_13360492_13365945_13366092_13371833_13372033_13373717_13373874_13375503_13375642_13376290_13376432_13377455_13377563_13378911_13378981_13379562_13379722_13386274_13386408_13388302_13388454_13391210_13391308_13397356_13397489_13399724_13399862_13420059
H1_mix_00062261	chr3	-	417	2	NNC	ENSG00000132182.12	novel	7206	40	NA	NA	45	-62238	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGGTTTACATATTTT	-2	True	NA	-4	True	AATAAA	-19	NA	13420264	13413900	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_13414113_13420059
H1_mix_00062262	chr3	-	3358	2	FSM	ENSG00000287059.1	ENST00000661964.1	3351	2	0	-7	0	7	multi-exon	FALSE	canonical	2	3	junction_1	0	177	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATTTACAATTGCTGTT	NA	False	NA	NA	False	NA	NA	NA	14047181	14038639	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_14041629_14046812
H1_mix_00062264	chr3	-	1612	4	FSM	ENSG00000163528.13	ENST00000295767.9	1603	4	-14	5	-14	-5	multi-exon	FALSE	canonical	3	25	junction_3	139.045156533968	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTTTGAATGTGTCCT	856	False	NA	-6	True	ATTAAA	-18	NA	14124884	14112081	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_14113195_14116425_14116525_14121916_14122087_14124654
H1_mix_00062265	chr3	-	3650	16	FSM	ENSG00000154767.15	ENST00000285021.12	3650	16	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_8	29.1520153677237	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGCTCTATATTTTCT	-13	True	NA	-11	True	AATAAA	-14	NA	14178601	14145146	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_14146160_14147289_14147380_14147907_14148002_14148561_14148732_14148813_14148949_14152334_14152417_14156334_14156496_14158010_14158893_14159740_14159831_14164812_14164934_14165427_14165586_14167168_14167254_14168256_14168381_14170437_14170551_14172866_14173063_14178465
H1_mix_00062268	chr3	-	3767	11	NNC	ENSG00000144596.13	novel	7724	24	NA	NA	-47119	5862	at_least_one_novel_splicesite	TRUE	canonical	3	18	junction_1	8.75214259481643	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCGAAAAGCAGAGTGACAT	NA	False	NA	NA	False	AATAAA	-7	NA	14603194	14514829	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_14517214_14517771_14517898_14520109_14520280_14520389_14520538_14521641_14521788_14522999_14523076_14523611_14523699_14524392_14524539_14525436_14525573_14525850_14525932_14602927
H1_mix_00062269	chr3	-	3741	2	FSM	ENSG00000225733.7	ENST00000440079.1	1527	2	26	-2240	-21	0	multi-exon	FALSE	canonical	3	48	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAATTGCTGTTAGCCACC	-10	True	NA	-20	True	AATAAA	-14	NA	14947479	14942783	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_14946155_14947109
H1_mix_00062270	chr3	-	4175	2	FSM	ENSG00000225733.7	ENST00000655923.1	3818	2	-355	-2	0	2	multi-exon	FALSE	canonical	3	142	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACGTAATTGCTGTTAGCC	536	False	NA	-23	True	AATAAA	-11	NA	14947893	14942786	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_14946155_14947086
H1_mix_00062271	chr3	-	3778	2	FSM	ENSG00000225733.7	ENST00000665449.1	3770	2	0	-8	0	0	multi-exon	FALSE	canonical	3	140	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCACGTAATTGCTGTTAG	5	True	NA	-25	True	AATAAA	-9	NA	14948424	14942788	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_14946155_14948012
H1_mix_00062272	chr3	-	4100	2	FSM	ENSG00000225733.7	ENST00000661022.1	1916	2	-701	-1483	-43	0	multi-exon	FALSE	canonical	2	20	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAATTGCTGTTAGCCACC	NA	False	NA	-20	True	AATAAA	-14	NA	14948467	14942783	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_14946155_14947738
H1_mix_00062273	chr3	-	4572	4	FSM	ENSG00000131368.8	ENST00000253686.7	4572	4	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_1	55.1180551180827	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGCATGTATAAATATCA	-34	True	NA	1	True	AATAAA	-21	NA	15065315	15048511	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_15052634_15053379_15053468_15059368_15059476_15065060
H1_mix_00062274	chr3	-	1279	3	FSM	ENSG00000131368.8	ENST00000444840.6	1281	3	2	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	366.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGACATTGGGGCCCTG	-34	True	NA	NA	False	NA	NA	NA	15065315	15051716	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_15052634_15059368_15059476_15065060
H1_mix_00062275	chr3	-	6698	14	FSM	ENSG00000131381.12	ENST00000253699.7	6678	14	0	-20	0	20	multi-exon	FALSE	canonical	3	44	junction_13	23.3002018936322	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCACATGTGTTACAAGT	-6	True	NA	9	True	AATAAA	-34	NA	15099148	15070052	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_15074931_15075605_15075711_15077061_15077165_15078074_15078162_15080731_15080803_15082366_15082609_15084734_15084897_15084999_15085046_15085860_15085962_15090398_15090540_15095972_15096289_15096534_15096711_15098118_15098275_15099034
H1_mix_00062276	chr3	-	7948	11	NNC	ENSG00000131381.12	novel	3005	13	NA	NA	4412	-1615	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_9	36.4422831337445	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCACATTTCTGTAGCAC	4421	False	NA	-7	True	NA	NA	NA	15094721	15071687	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_15074931_15075605_15075711_15077061_15077165_15078074_15078162_15080731_15080803_15082366_15082609_15084734_15084897_15084999_15085046_15085860_15085962_15090134_15090540_15091338
H1_mix_00062281	chr3	-	903	3	FSM	ENSG00000131381.12	ENST00000449050.5	903	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	12.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCTTGACTGTTCTTTA	-1	True	NA	NA	False	AGTAAA	-15	NA	15099143	15095670	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_15096289_15096534_15096711_15099034
H1_mix_00062283	chr3	-	3279	9	FSM	ENSG00000131370.16	ENST00000383791.8	3279	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_6	3.04138126514911	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTGGTTGGCCAATCAT	-23	True	NA	NA	False	ATTAAA	-19	NA	15332586	15254352	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_15256304_15256852_15257114_15258830_15259051_15259760_15259804_15262158_15262290_15269712_15269878_15304102_15304232_15330503_15330567_15332270
H1_mix_00062285	chr3	-	3068	6	FSM	ENSG00000206562.12	ENST00000383790.8	2618	6	26	-476	0	476	multi-exon	FALSE	canonical	3	118	junction_2	59.9546495277889	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGCAGGCCTGGGCCCT	-1	True	NA	NA	False	NA	NA	NA	15427518	15409283	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_15411438_15414020_15414163_15415771_15415943_15424954_15425090_15426286_15426636_15427401
H1_mix_00062286	chr3	-	1135	6	NIC	ENSG00000206562.12	novel	615	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_1	70.7004950477718	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTTGAGATTACTTTCC	-1	True	NA	-37	True	AATAAA	-18	NA	15427518	15413668	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_15413946_15415497_15415584_15415771_15415943_15424954_15425090_15426286_15426636_15427401
H1_mix_00062287	chr3	-	1413	6	FSM	ENSG00000206562.12	ENST00000383789.9	1413	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	95.3687579870893	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAG	1246	False	15427543	NA	False	NA	NA	NA	15427532	15414373	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_15414915_15415497_15415584_15415771_15415943_15424954_15425090_15426286_15426636_15427401
H1_mix_00062290	chr3	-	1758	14	FSM	ENSG00000131373.15	ENST00000451445.6	1734	14	0	-24	0	-6	multi-exon	FALSE	canonical	2	4	junction_10	83.6643052701172	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAGAAAAAGTTAGAA	0	True	NA	95	True	AATAAA	-42	NA	15601587	15560721	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_15560898_15563357_15563545_15564550_15564659_15567843_15568003_15568431_15568587_15571667_15571770_15573158_15573243_15574976_15575083_15579909_15580046_15582876_15582990_15591599_15591681_15596383_15596425_15601089_15601195_15601382
H1_mix_00062291	chr3	-	1881	16	FSM	ENSG00000131373.15	ENST00000456194.6	1880	16	0	-1	0	0	multi-exon	FALSE	canonical	3	30	junction_13	70.9749877695579	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTTACAGTAAAGGAATT	-3	True	NA	71	True	AATAAA	-18	NA	15601569	15560745	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_15560898_15563357_15563545_15564550_15564659_15567843_15568003_15568431_15568587_15571667_15571770_15573158_15573243_15574976_15575083_15579909_15580046_15582876_15582990_15585247_15585343_15586524_15586603_15589539_15589613_15596383_15596425_15601089_15601195_15601382
H1_mix_00062292	chr3	-	6423	29	NNC	ENSG00000206560.12	novel	4408	29	NA	NA	46	157	intron_retention	TRUE	canonical	1	1	junction_28	47.7665854303348	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTCAACAAATACTGCTT	88	False	NA	NA	False	AATATA	-2	NA	15859725	15667078	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_15670557_15675897_15675990_15676973_15677057_15677479_15677563_15678208_15678355_15679300_15679385_15679475_15679564_15685225_15685446_15686001_15686120_15686221_15686310_15690018_15690221_15694738_15694814_15695187_15695215_15696133_15696246_15707923_15708065_15709667_15709737_15711210_15711275_15712139_15712223_15713526_15713642_15714577_15714657_15720914_15721128_15724381_15724525_15735409_15735498_15737032_15737234_15751749_15751821_15766233_15766313_15795222_15795307_15859376_15859454_15859705
H1_mix_00062294	chr3	-	4411	29	FSM	ENSG00000206560.12	ENST00000412318.5	4408	29	0	-3	0	0	multi-exon	FALSE	canonical	3	9	junction_1	46.5406751001262	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGTCTGTCTCTTTTA	391	False	NA	NA	False	AATAAA	-19	NA	15859422	15667235	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_15668306_15670109_15670557_15675897_15675990_15676973_15677057_15677479_15677563_15678208_15678355_15679300_15679385_15679475_15679564_15685225_15685446_15686001_15686120_15686221_15686310_15690018_15690221_15694738_15694814_15695187_15695215_15696133_15696246_15707923_15708065_15709667_15709737_15711210_15711275_15712139_15712223_15713526_15713642_15714577_15714657_15720914_15721128_15724381_15724525_15735409_15735498_15737032_15737234_15751749_15751821_15766233_15766313_15795222_15795307_15859376
H1_mix_00062295	chr3	-	6565	28	FSM	ENSG00000206560.12	ENST00000399451.6	6564	28	0	-1	0	1	multi-exon	FALSE	canonical	3	150	junction_27	27.0815463164796	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGTCTGTCTCTTTTAC	42	False	NA	NA	False	AATAAA	-20	NA	15859771	15667234	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_15670557_15675897_15675990_15676973_15677057_15677479_15677563_15678208_15678355_15679300_15679385_15679475_15679564_15685225_15685446_15686001_15686120_15686221_15686310_15690018_15690221_15694738_15694814_15695187_15695215_15696133_15696246_15707923_15708065_15709667_15709737_15711210_15711275_15712139_15712223_15713526_15713642_15714577_15714657_15720914_15721128_15724381_15724525_15735409_15735498_15737032_15737234_15751749_15751821_15766233_15766313_15795222_15795307_15859376
H1_mix_00062298	chr3	-	4019	3	FSM	ENSG00000154813.10	ENST00000488423.2	4019	3	0	0	0	0	multi-exon	FALSE	canonical	3	385	junction_1	12	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGCGCCTGGGGAGTTC	11	True	NA	-1	True	AATAAA	-19	NA	16264943	16257060	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_16260830_16264154_16264230_16264768
H1_mix_00062299	chr3	-	3052	2	FSM	ENSG00000154813.10	ENST00000383775.4	3052	2	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCTTTTATGTAGTTTT	-15	True	NA	-1	True	AATAAA	-40	NA	16264969	16257978	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_16260830_16264768
H1_mix_00062300	chr3	-	1112	3	FSM	ENSG00000154813.10	ENST00000285082.8	1178	3	66	0	66	0	multi-exon	FALSE	canonical	1	3	junction_2	191	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTTGTGTTTTGATA	-8	True	NA	NA	False	NA	NA	NA	16264711	16259909	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_16260830_16264154_16264230_16264594
H1_mix_00062301	chr3	-	2986	10	FSM	ENSG00000131378.14	ENST00000334133.9	2986	10	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_8	5.00616903380836	211	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGAGTGTTTATCGTGT	-17	True	NA	0	True	AATAAA	-26	NA	16513699	16315844	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_16317233_16323375_16323458_16326772_16326877_16357931_16358048_16370075_16370280_16377717_16378103_16409374_16409484_16433850_16434038_16493724_16493878_16513441
H1_mix_00062302	chr3	-	1230	3	NNC	ENSG00000229271.2	novel	1001	2	NA	NA	0	6417	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	5.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCAGAACTCTGAAAAAATA	414	False	NA	NA	False	NA	NA	NA	16697479	16641335	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_16641426_16647573_16648613_16697378
H1_mix_00062303	chr3	-	815	1	FSM	ENSG00000224039.1	ENST00000419017.1	1458	1	645	-2	645	2	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAAGCTGCCAGCTGATGT	4336	False	NA	NA	False	NA	NA	NA	16693557	16692742	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_16692700_16693600
H1_mix_00062304	chr3	-	6646	22	NIC	ENSG00000131374.14	novel	7854	22	NA	NA	-91	-2	combination_of_known_junctions	FALSE	canonical	2	51	junction_20	11.4790551650819	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTATAGCTTGACTTATTC	NA	False	NA	-1	True	AATAAA	-19	NA	17742839	17157163	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_17161257_17166766_17166929_17167748_17167829_17185108_17185209_17214206_17214371_17238162_17238420_17258505_17258592_17291894_17292002_17307991_17308135_17372074_17372248_17374470_17374541_17374628_17374680_17376524_17376614_17383912_17384016_17403180_17403249_17404693_17404769_17404871_17404962_17406417_17406527_17428449_17428520_17508473_17508606_17623848_17623914_17742480
H1_mix_00062305	chr3	-	581	6	FSM	ENSG00000131374.14	ENST00000452492.6	581	6	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_4	44.1062353868475	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACAAGATGTCAAAAGAAC	10	True	NA	NA	False	GATAAA	-19	NA	17742607	17403200	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_17403249_17404693_17404769_17404871_17404962_17406417_17406527_17508473_17508606_17742480
H1_mix_00062309	chr3	-	4589	12	FSM	ENSG00000182568.17	ENST00000417717.6	4589	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	24.1335814181426	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTAGGGTTTGTCTGC	1235	False	NA	-6	True	ATTAAA	-18	NA	18424573	18347939	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_18349683_18351312_18351409_18351991_18352196_18378169_18378326_18386398_18386612_18394461_18394917_18397178_18397291_18415110_18415235_18416006_18416134_18416901_18417079_18420756_18420992_18423626
H1_mix_00062311	chr3	-	2338	9	FSM	ENSG00000129810.15	ENST00000263753.8	2338	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	74.0147789296165	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCCTGTTATGGCCCTG	8	True	NA	NA	False	AATAAA	-44	NA	20186191	20160592	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_20161227_20170723_20170816_20171042_20171233_20174248_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20186058
H1_mix_00062313	chr3	-	4484	8	ISM	ENSG00000129810.15	ENST00000263753.8	2338	9	0	7351	0	1537	5prime_fragment	FALSE	canonical	3	88	junction_7	49.7622920923636	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCTTCTTTTGAGACAC	8	True	NA	NA	False	TATAAA	-12	NA	20186191	20167943	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_20170816_20171042_20171233_20174248_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20186058
H1_mix_00062314	chr3	-	3709	8	FSM	ENSG00000129810.15	ENST00000412997.6	3070	8	79	-718	0	715	multi-exon	FALSE	canonical	3	150	junction_7	33.7656992964694	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCTGAGGCAGGAGAACG	113	False	NA	NA	False	AATAGA	-38	NA	20186127	20168765	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_20170816_20171042_20171233_20174248_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20185947
H1_mix_00062315	chr3	-	2266	7	FSM	ENSG00000129810.15	ENST00000442720.5	2266	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	73.0990576014645	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCTTTCCTTCTATTCTT	-7	True	NA	0	True	AATAAA	-18	NA	20186206	20169480	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_20170816_20171042_20171233_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20185947
H1_mix_00062316	chr3	-	1187	8	FSM	ENSG00000129810.15	ENST00000437051.5	1187	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	74.2782963329292	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCTTAAGCATTATCAT	8	True	NA	-21	True	AATAAA	-33	NA	20186191	20170484	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_20170816_20171042_20171233_20175004_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20186058
H1_mix_00062317	chr3	-	2165	7	ISM	ENSG00000129810.15	ENST00000306698.6	1531	8	0	8863	0	25	5prime_fragment	FALSE	canonical	3	32	junction_2	80.7556327584784	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAAAAATAGAGTATCTCT	8	True	NA	25	True	AATAAA	-43	NA	20186191	20169455	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_20170816_20171042_20171233_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20186058
H1_mix_00062319	chr3	-	3195	2	Antisense	novelGene_ENSG00000231304.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATCTGTGTGGCTATCTT	6261	False	NA	-3	True	AATAAA	-12	NA	20970742	20939272	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr3_-_20942435_20970709
H1_mix_00062320	chr3	-	10478	8	FSM	ENSG00000151789.12	ENST00000281523.8	10478	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	7.86882248795452	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGGATGATGCTTGTTC	-1	True	NA	NA	False	ATTAAA	-32	NA	21751210	21412217	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_21421448_21423962_21424065_21425491_21425671_21436969_21437204_21510860_21511024_21564573_21564685_21664885_21665029_21750894
H1_mix_00062323	chr3	-	5391	36	FSM	ENSG00000077097.16	ENST00000435706.6	5389	36	0	-2	0	0	multi-exon	TRUE	canonical	3	630	junction_35	143.168221305696	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTGTCTCTTTACTGAA	416	False	NA	-3	True	ATTAAA	-13	NA	25664499	25597983	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_25598478_25599434_25599530_25601099_25601226_25604759_25604871_25606042_25606123_25607170_25607376_25609182_25609345_25609567_25609713_25612514_25612710_25615204_25615289_25615430_25615587_25618417_25618510_25618653_25618850_25619861_25620063_25620681_25620817_25623514_25623747_25624296_25624446_25624681_25624804_25626559_25626675_25626771_25626865_25627186_25627297_25628846_25628953_25629034_25629146_25630028_25630155_25630311_25630470_25630800_25630940_25632445_25632584_25632692_25632795_25633840_25634015_25635935_25636149_25637214_25637313_25638164_25638311_25642321_25642386_25643693_25643785_25645299_25645456_25664228
H1_mix_00062324	chr3	-	5814	36	FSM	ENSG00000077097.16	ENST00000264331.9	5814	36	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_35	176.726090378326	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTGTCTCTTTACTGAA	8	True	NA	-3	True	ATTAAA	-13	NA	25664907	25597983	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_25598478_25599434_25599530_25601099_25601226_25604759_25604871_25606042_25606123_25607170_25607376_25609182_25609345_25609567_25609713_25612514_25612710_25615204_25615289_25615430_25615587_25618417_25618510_25618653_25618850_25619861_25620063_25620681_25620817_25623514_25623747_25624296_25624446_25624681_25624804_25626559_25626675_25626771_25626865_25627186_25627297_25628846_25628953_25629034_25629146_25630028_25630155_25630311_25630470_25630800_25630940_25632445_25632584_25632692_25632795_25633840_25634015_25635935_25636149_25637214_25637313_25638164_25638311_25642321_25642386_25643693_25643785_25645299_25645471_25664228
H1_mix_00062327	chr3	-	2606	12	FSM	ENSG00000151092.18	ENST00000428257.5	2534	12	117	-189	0	188	multi-exon	FALSE	canonical	3	33	junction_6	100.85854589965	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAATATTCTTGATTTT	6628	False	NA	NA	False	NA	NA	NA	25783381	25718755	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_25719636_25720013_25720192_25729132_25729319_25732318_25732484_25733871_25733983_25736308_25736401_25737333_25737456_25739576_25739800_25751097_25751264_25764065_25764312_25778573_25778689_25783259
H1_mix_00062328	chr3	-	3205	4	FSM	ENSG00000151092.18	ENST00000496726.5	3196	4	0	-9	0	0	multi-exon	FALSE	canonical	3	23	junction_3	133.426634022847	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCCATATGTGACTATAAT	6536	False	NA	-17	True	AATAAA	-20	NA	25736346	25719269	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_25719636_25720013_25720192_25729132_25729319_25733871
H1_mix_00062329	chr3	-	3058	11	FSM	ENSG00000151092.18	ENST00000493324.5	3058	11	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	79.297919266523	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCCATATGTGACTATAAT	-9	True	NA	-17	True	AATAAA	-20	NA	25783414	25719269	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_25719636_25720013_25720192_25729132_25729319_25732318_25732484_25733871_25733983_25736308_25737456_25739576_25739800_25751097_25751264_25764065_25764312_25778573_25778689_25783259
H1_mix_00062330	chr3	-	2025	11	FSM	ENSG00000151092.18	ENST00000396649.7	2024	11	0	-1	0	0	multi-exon	FALSE	canonical	3	28	junction_1	79.6972396008795	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCCATATGTGACTATAAT	4	True	NA	-17	True	AATAAA	-20	NA	25783438	25719269	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_25719636_25729132_25729319_25732318_25732484_25733871_25733983_25736003_25736150_25737333_25737456_25739576_25739800_25751097_25751264_25764065_25764312_25778573_25778689_25783259
H1_mix_00062331	chr3	-	8161	19	ISM	ENSG00000033867.17	ENST00000454389.6	8079	26	58742	0	-1140	0	3prime_fragment	FALSE	canonical	3	93	junction_18	20.6302696223621	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGGCTATTGTCTTTA	4962	False	NA	-16	True	AATAAA	-15	NA	27425642	27372722	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_27376846_27379248_27379357_27383152_27383251_27385891_27386024_27389930_27390105_27391739_27391809_27394517_27394770_27394953_27395116_27397683_27397798_27398191_27398354_27400763_27400870_27403138_27403385_27404829_27404964_27409355_27409531_27411641_27411749_27418485_27418633_27420699_27420788_27421621_27421780_27424036
H1_mix_00062332	chr3	-	3775	25	FSM	ENSG00000033867.17	ENST00000455077.5	3775	25	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_19	26.233328038966	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTATTTAATGAAATGCTC	-5	True	NA	-66	True	TTTAAA	-39	NA	27484347	27376605	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_27376846_27379248_27379357_27383152_27383251_27385891_27386024_27389930_27390105_27391739_27391809_27394517_27394770_27394953_27395116_27397683_27397798_27398191_27398354_27400763_27400870_27403138_27403385_27404829_27404964_27409355_27409531_27411641_27411749_27418485_27418633_27420699_27420788_27421621_27421780_27424036_27424153_27433915_27434105_27436387_27436549_27437387_27437527_27448650_27448798_27452416_27452499_27484078
H1_mix_00062334	chr3	-	3274	6	FSM	ENSG00000163508.13	ENST00000449599.4	3264	6	0	-10	0	6	multi-exon	FALSE	canonical	3	239	junction_4	25.350345165303	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTCTTCTGTGCTGTTGG	0	True	NA	-6	True	AATAAA	-29	NA	27722323	27715942	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_27717809_27718586_27718649_27718734_27718894_27719359_27719482_27720170_27720326_27721413
H1_mix_00062335	chr3	-	3608	6	FSM	ENSG00000163508.13	ENST00000295743.8	3386	6	-216	-6	-3	6	multi-exon	FALSE	canonical	3	22	junction_1	102.009019209088	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTCTTCTGTGCTGTTGG	-6	True	NA	-6	True	AATAAA	-29	NA	27722714	27715942	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_27717752_27718586_27718649_27718734_27718894_27719359_27719482_27720170_27720326_27721413
H1_mix_00062337	chr3	-	4403	8	FSM	ENSG00000163512.14	ENST00000479665.6	4403	8	0	0	0	0	multi-exon	FALSE	canonical	2	79	junction_1	41.8071373654533	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGGAACTTGAATTGATT	15	True	NA	-19	True	AATAAA	-39	NA	28348824	28321046	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_28324455_28326831_28326951_28332368_28332428_28336736_28336886_28337936_28338037_28338492_28338616_28340401_28340623_28348600
H1_mix_00062338	chr3	-	1376	7	FSM	ENSG00000163512.14	ENST00000420543.6	1366	7	0	-10	0	8	multi-exon	FALSE	canonical	3	36	junction_1	53.5892298466358	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCATTTGGCTTCCAAA	53	False	28349071	-6	True	AATAAA	-24	NA	28349050	28331680	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_28331955_28332368_28332428_28336736_28336886_28337936_28338037_28338492_28338616_28340401_28340623_28348600
H1_mix_00062340	chr3	-	3614	15	FSM	ENSG00000144644.15	ENST00000282538.10	3658	15	44	0	44	0	multi-exon	FALSE	canonical	0	0	junction_2	1.64130361329658	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGGACTCTCTTGTTTAG	190	False	NA	NA	False	AATAAA	-24	NA	30894617	30726196	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_30728416_30778178_30778269_30786354_30786407_30800888_30801089_30833852_30833935_30834216_30834282_30838996_30839114_30844209_30844265_30844386_30844467_30849995_30850112_30850834_30850942_30854698_30854790_30857014_30857142_30861592_30861766_30894577
H1_mix_00062342	chr3	-	3455	12	NIC	ENSG00000144645.15	novel	3625	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_11	54.604967533539	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTGTCTGTGTTTTAT	27	False	NA	NA	False	AATATA	-16	NA	31960336	31660824	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_31662117_31664078_31664233_31668641_31668825_31670796_31670984_31683633_31684115_31702358_31702509_31733256_31733412_31747909_31748121_31830039_31830232_31876432_31876513_31879654_31879831_31960142
H1_mix_00062343	chr3	-	4031	12	FSM	ENSG00000144645.15	ENST00000396556.7	3625	12	-406	0	-363	0	multi-exon	FALSE	canonical	3	172	junction_6	24.1595933412221	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTGTCTGTGTTTTAT	219	False	NA	NA	False	AATATA	-16	NA	31981668	31660824	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_31662117_31664078_31664233_31668641_31668825_31670796_31670984_31683633_31684115_31702358_31702509_31733256_31733412_31747909_31748121_31830039_31830232_31876432_31876513_31879654_31879831_31980898
H1_mix_00062346	chr3	-	3307	4	FSM	ENSG00000091317.8	ENST00000205636.4	3307	4	0	0	0	0	multi-exon	FALSE	canonical	3	733	junction_1	37.4195433192633	308	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACCTTTGTAAGTGTTTA	-32	True	NA	-11	True	AATAAA	-20	NA	32502852	32481311	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_32484098_32487937_32488037_32491709_32491887_32502607
H1_mix_00062348	chr3	-	2485	13	FSM	ENSG00000144635.9	ENST00000273130.9	2485	13	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_5	36.8083437099072	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGTTGCATTCTCTTA	33	False	32570891	-3	True	AATAAA	-29	NA	32570858	32525973	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_32526909_32528445_32528602_32529539_32529661_32530283_32530329_32530460_32530521_32532985_32533098_32534510_32534647_32537010_32537105_32541036_32541207_32544875_32545107_32545848_32545966_32570345_32570420_32570624
H1_mix_00062349	chr3	-	605	2	FSM	ENSG00000144635.9	ENST00000474077.1	605	2	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTGCATGATGAAGACAG	33	False	32570891	38	True	AATAGA	-41	NA	32570858	32545873	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_32545966_32570345
H1_mix_00062350	chr3	-	357	1	FSM	ENSG00000237676.1	ENST00000429309.1	333	1	0	-24	0	24	mono-exon	FALSE	NA	NA	NA	NA	NA	389	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAATAAAATTTGCCTGAG	NA	False	NA	NA	False	AGTAAA	-17	NA	32635554	32635197	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_32635200_32635600
H1_mix_00062353	chr3	-	2437	17	NNC	ENSG00000170266.16	novel	2523	16	NA	NA	0	3086	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	139.616830557781	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGGATGTGGTGGTGC	-4	True	NA	NA	False	NA	NA	NA	33097146	32993522	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_32993552_32996731_32997345_33014055_33014311_33016708_33016841_33018447_33018562_33021565_33021656_33024250_33024326_33046119_33046233_33051757_33051799_33051882_33052005_33053490_33053550_33058088_33058270_33065462_33065558_33068229_33068291_33068819_33068971_33072543_33072714_33097010
H1_mix_00062354	chr3	-	2534	16	FSM	ENSG00000170266.16	ENST00000399402.7	2512	16	0	-22	0	22	multi-exon	FALSE	canonical	3	99	junction_15	120.161446950897	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCTTTTCTGATCGTTA	307	False	NA	18	True	NA	NA	NA	33096835	32996586	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_32997345_33014055_33014311_33016708_33016841_33018447_33018562_33021565_33021656_33024250_33024326_33046119_33046233_33051757_33051799_33051882_33052005_33053490_33053550_33058088_33058270_33065462_33065558_33068229_33068291_33068819_33068971_33072543_33072714_33096718
H1_mix_00062359	chr3	-	729	4	FSM	ENSG00000173705.9	ENST00000412539.1	729	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	13.0213499897497	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGGTGGATGATGACACC	29	True	NA	NA	False	NA	NA	NA	33218793	33153709	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_33154034_33207807_33207927_33213927_33214106_33218685
H1_mix_00062361	chr3	-	7202	2	FSM	ENSG00000153560.12	ENST00000492136.1	7394	2	194	-2	194	0	multi-exon	FALSE	canonical	3	367	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGTCTCATTTAAAATC	NA	False	NA	0	True	AATAAA	-23	NA	33398244	33388335	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_33393455_33396161
H1_mix_00062362	chr3	-	4175	16	FSM	ENSG00000153560.12	ENST00000283629.8	4175	16	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_8	72.5853979805856	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGTCTCATTTAAAATC	-27	True	NA	0	True	AATAAA	-23	NA	33440405	33388335	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_33390369_33392562_33392615_33393311_33393455_33396161_33396281_33397044_33397136_33400188_33400283_33400961_33401017_33402800_33402905_33408689_33408798_33409235_33409347_33409448_33409602_33411580_33411688_33412721_33412828_33416757_33416835_33425589_33425742_33439735
H1_mix_00062368	chr3	-	7203	37	NIC	ENSG00000163539.18	novel	7141	40	NA	NA	-18	58	combination_of_known_splicesites	FALSE	canonical	3	16	junction_10	57.5482821980866	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTGGTTTGAACCTGAGG	3	True	NA	57	True	AATATA	-21	NA	33718231	33496186	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_33498718_33501651_33501769_33510557_33510765_33516022_33516152_33516980_33517175_33535232_33535462_33538788_33538943_33543432_33543540_33544697_33544842_33551251_33551396_33559124_33559176_33559306_33559386_33560807_33560972_33570726_33570791_33573109_33573355_33576168_33576276_33581820_33581929_33584749_33584921_33592394_33592497_33602951_33603126_33604153_33604210_33606590_33606759_33607383_33607462_33608566_33608627_33612000_33612072_33619602_33619739_33622134_33622281_33626987_33627081_33632291_33632375_33644756_33644904_33663444_33663516_33684358_33684457_33687059_33687136_33688276_33688369_33689828_33689933_33696854_33696934_33717807
H1_mix_00062369	chr3	-	7085	36	NIC	ENSG00000163539.18	novel	7159	39	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	120	junction_12	25.8834120704393	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTTATTTCTTCTGGGT	9	True	NA	-1	True	ATTAAA	-24	NA	33718225	33496244	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_33498718_33501651_33501769_33510557_33510765_33516022_33516152_33516980_33517175_33535232_33535462_33538788_33538943_33543432_33543540_33544697_33544842_33551251_33551396_33559306_33559386_33560807_33560972_33570726_33570791_33573109_33573355_33576168_33576276_33581820_33581929_33584749_33584921_33592394_33592497_33602951_33603126_33604153_33604210_33606590_33606759_33607383_33607462_33608566_33608627_33612000_33612072_33619602_33619739_33622134_33622281_33626987_33627081_33632291_33632372_33644756_33644904_33663444_33663516_33684358_33684457_33687059_33687136_33688276_33688369_33689828_33689933_33696854_33696934_33717807
H1_mix_00062372	chr3	-	2972	25	NNC	ENSG00000163539.18	novel	1940	12	NA	NA	20	4347	at_least_one_novel_splicesite	FALSE	canonical	2	23	junction_1	42.6591790304919	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGCTTCCATTGAATT	244	False	NA	-7	True	AATAAA	-13	NA	33717990	33566383	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_33566647_33570726_33570791_33573109_33573355_33576168_33576276_33581820_33581929_33584749_33584921_33592394_33592497_33602951_33603126_33604153_33604210_33606590_33606759_33607383_33607462_33608566_33608627_33612000_33612072_33619602_33619739_33622134_33622281_33626987_33627081_33632291_33632372_33644756_33644904_33663444_33663516_33684358_33684457_33687059_33687136_33688276_33688369_33689828_33689933_33696854_33696934_33717807
H1_mix_00062374	chr3	-	5447	5	FSM	ENSG00000163673.8	ENST00000636136.2	5651	5	204	0	204	0	multi-exon	FALSE	canonical	3	14	junction_3	4.60298815988049	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCAGGTCCTCAAAGTTC	NA	False	NA	NA	False	AATAAA	-16	NA	36764349	36712420	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_36715522_36718009_36718178_36721526_36721660_36737207_36739085_36764181
H1_mix_00062375	chr3	-	1716	1	FSM	ENSG00000230067.3	ENST00000388967.3	1683	1	-33	0	-33	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3692	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTCCTAGAATAGTGCTT	NA	False	NA	NA	False	NA	NA	NA	36768832	36767116	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_36767100_36768800
H1_mix_00062376	chr3	-	10611	24	FSM	ENSG00000168016.15	ENST00000645898.2	10611	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	6.49734568459918	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTGCCGTTTTATTTCC	31	True	NA	-1	True	TATAAA	-19	NA	36945054	36826818	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_36828376_36829563_36829663_36830872_36833920_36834761_36834908_36838371_36838505_36838612_36838717_36842621_36842711_36846247_36846405_36847199_36847347_36851718_36851857_36852145_36852346_36855172_36858050_36858717_36858895_36860905_36861161_36864318_36864481_36874125_36874297_36889828_36889961_36892201_36892341_36892900_36892985_36895639_36895759_36899108_36899260_36903148_36903276_36908322_36908455_36944786
H1_mix_00062377	chr3	-	8174	1	FSM	ENSG00000178567.8	ENST00000322716.8	8089	1	-55	-30	-55	30	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCTTGGCATACTCTTT	4	True	NA	NA	False	NA	NA	NA	36993186	36985012	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_36985000_36993200
H1_mix_00062379	chr3	-	492	1	FSM	ENSG00000224858.5	ENST00000494408.1	492	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2471	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATATCTCTGCCAACATG	12	False	NA	NA	False	NA	NA	NA	37017014	37016522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_37016500_37017000
H1_mix_00062380	chr3	-	2815	14	FSM	ENSG00000093167.18	ENST00000354379.8	2821	14	6	0	6	0	multi-exon	FALSE	canonical	3	94	junction_8	22.0542633643561	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAATAAAATCTCTAATAT	201	False	NA	-30	True	AATAAA	-28	NA	37176354	37052655	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_37053962_37054410_37054516_37055085_37055166_37058789_37058911_37063741_37063792_37065809_37065943_37075023_37075117_37083635_37083807_37094791_37094909_37096615_37096661_37129062_37129150_37148893_37149039_37174538_37174606_37176059
H1_mix_00062382	chr3	-	4687	6	FSM	ENSG00000093167.18	ENST00000496479.5	3585	6	-419	-683	-419	0	multi-exon	FALSE	canonical	3	153	junction_5	7.60526133673262	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTACTGACATGTTCAT	NA	False	NA	2	True	ATTAAA	-23	NA	37069182	37053003	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_37053962_37054410_37054516_37055085_37055166_37058789_37058911_37063741_37063792_37065809
H1_mix_00062383	chr3	-	2522	15	FSM	ENSG00000093167.18	ENST00000421276.6	2522	15	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_8	41.4140368592533	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTACTGACATGTTCAT	-28	True	NA	2	True	ATTAAA	-23	NA	37176337	37053003	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_37053962_37054410_37054516_37055085_37055166_37058789_37058911_37063741_37063792_37065809_37065943_37075023_37075117_37083635_37083807_37091466_37091539_37094791_37094909_37096615_37096661_37129062_37129150_37148893_37149039_37174538_37174606_37176059
H1_mix_00062384	chr3	-	2663	14	NIC	ENSG00000093167.18	novel	1989	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_13	35.5719123290492	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTACTGACATGTTCAT	1	True	NA	2	True	ATTAAA	-23	NA	37176308	37053003	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_37053962_37054410_37054516_37055085_37055166_37058789_37058911_37063741_37063792_37065809_37065943_37075023_37075117_37083635_37083807_37094791_37094909_37096615_37096661_37129062_37129150_37148893_37149039_37174538_37174606_37175817
H1_mix_00062386	chr3	-	2850	3	FSM	ENSG00000093167.18	ENST00000490597.5	1044	3	158	-1964	0	1964	multi-exon	FALSE	canonical	1	2	junction_1	72.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATCAGAATTTCATTTGT	411	False	NA	62	True	NA	NA	NA	37176144	37168368	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_37171067_37174538_37174606_37176059
H1_mix_00062388	chr3	-	1153	3	NNC	ENSG00000093167.18	novel	409	3	NA	NA	7	367	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	64	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCATATGAAGATCTTTT	202	False	NA	NA	False	AATATA	-22	NA	37176353	37172402	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_37173195_37174538_37174606_37176059
H1_mix_00062389	chr3	-	314	4	FSM	ENSG00000235257.10	ENST00000438136.5	578	4	0	264	0	-264	multi-exon	FALSE	canonical	0	0	junction_1	6.34209919681348	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCATTTTATTCCTGGAAA	29	True	NA	NA	False	NA	NA	NA	37861738	37753952	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_37754053_37821013_37821101_37834678_37834768_37861700
H1_mix_00062392	chr3	-	1704	12	FSM	ENSG00000060971.19	ENST00000333167.13	1699	12	0	-5	0	0	multi-exon	FALSE	canonical	3	107	junction_4	27.7598913947431	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTGTGGTTTTTTTCCA	32	False	38137147	-10	True	AGTAAA	-20	NA	38137127	38122709	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_38123123_38125564_38125711_38125825_38125882_38126161_38126342_38126509_38126701_38127785_38127867_38129289_38129389_38131595_38131639_38131925_38132006_38133951_38134010_38136591_38136686_38136864
H1_mix_00062393	chr3	-	1910	10	FSM	ENSG00000060971.19	ENST00000411549.5	1944	10	34	0	34	0	multi-exon	FALSE	canonical	3	43	junction_6	46.7018385975869	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTGTGGTTTTTTTCCA	NA	False	NA	-10	True	AGTAAA	-20	NA	38137208	38122709	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_38123123_38125564_38125711_38125825_38125882_38126161_38126701_38127785_38127867_38129289_38129389_38131925_38132006_38133951_38134010_38136591_38136686_38136864
H1_mix_00062395	chr3	-	886	3	FSM	ENSG00000060971.19	ENST00000469600.1	876	3	-10	0	-10	0	multi-exon	FALSE	canonical	3	205	junction_2	4.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATTTGGAAAATGTGAACA	NA	False	NA	NA	False	NA	NA	NA	38126352	38122909	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_38123123_38125564_38125711_38125825
H1_mix_00062396	chr3	-	4035	2	FSM	ENSG00000229589.1	ENST00000441531.1	2517	2	-610	-908	-610	908	multi-exon	FALSE	canonical	1	2	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACAGTGTATAATTGTTG	390	False	NA	NA	False	ATTAAA	-20	NA	38455430	38450118	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_38453226_38454502
H1_mix_00062398	chr3	-	6284	26	FSM	ENSG00000183873.18	ENST00000450102.6	6284	26	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	6.08946631487522	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGAACTAAGGATTTTTC	282	False	NA	NA	False	CATAAA	-31	NA	38633349	38549967	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_38551559_38554278_38554550_38555655_38555761_38556440_38556579_38557230_38557285_38560146_38560429_38562414_38562538_38566408_38566583_38575296_38575452_38576660_38576782_38580930_38581372_38585690_38586042_38587399_38587574_38597728_38597968_38598917_38599051_38603711_38604084_38604728_38604909_38605950_38606149_38606668_38606811_38608150_38608215_38609733_38609965_38613974_38614067_38620842_38620972_38622399_38622490_38630310_38630430_38633034
H1_mix_00062401	chr3	-	2939	9	FSM	ENSG00000114745.14	ENST00000452389.6	2933	9	0	-6	0	0	multi-exon	FALSE	canonical	3	14	junction_4	52.1512224209558	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAAAGCCTTTATTCTAT	2	True	NA	-22	True	AATAAA	-26	NA	39107621	39096658	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_39098490_39098740_39098894_39099352_39099504_39100304_39100504_39100787_39100878_39101015_39101103_39102677_39102882_39103472_39103554_39107478
H1_mix_00062402	chr3	-	3240	8	FSM	ENSG00000114745.14	ENST00000441302.6	3240	8	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_4	19.2428094176946	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAAAGCCTTTATTCTAT	-15	True	NA	-22	True	AATAAA	-26	NA	39107638	39096658	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_39098490_39098740_39098894_39099352_39099504_39100304_39100878_39101015_39101103_39102677_39102882_39103472_39103554_39107478
H1_mix_00062403	chr3	-	1996	9	FSM	ENSG00000114745.14	ENST00000319283.8	3046	9	58	992	0	-132	multi-exon	FALSE	canonical	3	117	junction_4	23.35560692853	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACAGTGATCTCTTCTAA	54	False	NA	NA	False	NA	NA	NA	39107569	39097590	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_39098490_39098740_39098894_39099352_39099504_39100304_39100504_39100746_39100878_39101015_39101103_39102677_39102882_39103472_39103554_39107478
H1_mix_00062408	chr3	-	3177	5	FSM	ENSG00000144655.15	ENST00000514182.1	2593	5	-99	-485	-99	2	multi-exon	FALSE	canonical	3	26	junction_4	16.4525833837729	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGGTATGTATTTGTGG	NA	False	NA	-2	True	AATAAA	-18	NA	39154661	39141852	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_39144045_39144136_39144452_39144996_39145257_39146477_39146723_39154496
H1_mix_00062412	chr3	-	466	1	FSM	ENSG00000223513.1	ENST00000441771.1	245	1	38	-259	38	259	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGATAGAAGATTGTCTTC	NA	False	NA	NA	False	NA	NA	NA	41859556	41859090	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_41859100_41859600
H1_mix_00062413	chr3	-	647	4	FSM	ENSG00000168038.11	ENST00000414606.1	647	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	12.657891697365	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTACTGAATTTGGCTGT	2	True	NA	43	True	NA	NA	NA	41962130	41937094	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_41937341_41938097_41938198_41954621_41954808_41962015
H1_mix_00062415	chr3	-	1740	8	NIC	ENSG00000093183.14	novel	1446	8	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	23	junction_6	69.996792929449	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTCTTTGCACTTATG	24	True	NA	-22	True	AATAAA	-18	NA	42581942	42547968	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_42548658_42555929_42555996_42557577_42557697_42561116_42561297_42563522_42563687_42563764_42563981_42568864_42569074_42581845
H1_mix_00062418	chr3	-	6423	7	FSM	ENSG00000093183.14	ENST00000264454.8	6340	7	0	-83	0	83	multi-exon	FALSE	canonical	3	69	junction_1	48.7054639873415	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGTTGTTGAAAGAAGTGA	-1	True	NA	61	True	NA	NA	NA	42581967	42547885	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_42553449_42555929_42555996_42557577_42557697_42561116_42561297_42563522_42563687_42568864_42569074_42581845
H1_mix_00062419	chr3	-	1579	7	FSM	ENSG00000093183.14	ENST00000273156.11	1608	7	31	-2	-10	0	multi-exon	FALSE	canonical	3	126	junction_1	31.7144376515737	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTCTTTGCACTTATG	325	False	NA	-22	True	AATAAA	-18	NA	42581997	42547968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_42548658_42555929_42555996_42557577_42557697_42561116_42561297_42563522_42563687_42568864_42569074_42581845
H1_mix_00062420	chr3	-	2753	4	FSM	ENSG00000181061.14	ENST00000321331.12	2722	4	-28	-3	-28	3	multi-exon	FALSE	canonical	3	2649	junction_3	473.663969028208	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTCATGTGACATTTTT	37	False	42804534	-7	True	ATTAAA	-20	NA	42804518	42782904	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_42785321_42786027_42786163_42794156_42794276_42804435
H1_mix_00062421	chr3	-	1322	4	FSM	ENSG00000181061.14	ENST00000418900.6	1322	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	1694.91992600109	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGTTATTAAAGTAAGTG	3	True	NA	-33	True	NA	NA	NA	42804488	42784329	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_42785321_42786027_42786163_42794156_42794300_42804435
H1_mix_00062423	chr3	-	2551	2	FSM	ENSG00000144647.7	ENST00000344697.3	2547	2	1	-5	1	0	multi-exon	FALSE	canonical	3	68	junction_1	0	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAGTCTTCTTATTGGAT	-1	True	NA	-3	True	ATTAAA	-18	NA	43106078	43079228	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_43081537_43105835
H1_mix_00062425	chr3	-	2039	12	FSM	ENSG00000160746.13	ENST00000350459.8	2039	12	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_7	81.1643572793008	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTGACTCCTTCTGCC	8	True	NA	-34	True	ATTAAA	-6	NA	43621965	43366347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_43366975_43432610_43432728_43549719_43549849_43555277_43555470_43561219_43561403_43565652_43565728_43574808_43574865_43580352_43580473_43598531_43598667_43600383_43600582_43605713_43605864_43621908
H1_mix_00062426	chr3	-	2430	12	FSM	ENSG00000160746.13	ENST00000396091.7	2419	12	0	-11	0	0	multi-exon	FALSE	canonical	2	20	junction_10	78.5843758786147	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTGACTCCTTCTGCC	-11	True	NA	-34	True	ATTAAA	-6	NA	43621984	43366347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_43366975_43432610_43432728_43549719_43549849_43555277_43555470_43561219_43561403_43565652_43565728_43574808_43574865_43576691_43577262_43580352_43580473_43598531_43598667_43605713_43605864_43621908
H1_mix_00062427	chr3	-	1065	1	FSM	ENSG00000272121.1	ENST00000606217.1	1069	1	13	-9	13	9	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACTGGATTCTTTCAAAC	NA	False	NA	11	True	ATTAAA	-28	NA	43999136	43998071	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_43998100_43999100
H1_mix_00062428	chr3	-	675	1	FSM	ENSG00000280435.1	ENST00000624016.1	1670	1	1076	-81	1076	81	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTAGGTCTGGCTATGTT	NA	False	NA	NA	False	TTTAAA	-15	NA	44116411	44115736	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_44115700_44116400
H1_mix_00062429	chr3	-	18301	8	FSM	ENSG00000185219.18	ENST00000396077.8	18314	8	0	13	0	-13	multi-exon	FALSE	canonical	3	41	junction_7	6.67618368317024	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGCTCAAAATTACGTT	-4	True	NA	-11	True	AATAAA	-19	NA	44477670	44431717	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_44448740_44449512_44449624_44450446_44450574_44450867_44450963_44451313_44451483_44455120_44455697_44458243_44458365_44477590
H1_mix_00062434	chr3	-	2732	1	FSM	ENSG00000214820.3	ENST00000452433.1	1089	1	-1552	-91	-1552	91	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTATGAGGACAGCCAGTG	NA	False	NA	NA	False	AAGAAA	-16	NA	44582578	44579846	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_44579800_44582600
H1_mix_00062436	chr3	-	12598	7	FSM	ENSG00000163812.15	ENST00000424952.7	12594	7	0	-4	0	0	multi-exon	TRUE	canonical	3	188	junction_1	26.5920831994955	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTCTCCTGTTTTAAT	-18	True	NA	-1	True	AATAAA	-25	NA	44976174	44915256	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_44926848_44929305_44929437_44933117_44933200_44933887_44933985_44945167_44945293_44959130_44959461_44975932
H1_mix_00062437	chr3	-	3902	7	FSM	ENSG00000163812.15	ENST00000339420.7	3902	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	74.1861397656822	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTCTCCTGTTTTAAT	-26	True	NA	-1	True	AATAAA	-25	NA	44976182	44915256	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_44918144_44929305_44929437_44933117_44933200_44933887_44933985_44945167_44945293_44959130_44959461_44975932
H1_mix_00062439	chr3	-	540	4	FSM	ENSG00000163812.15	ENST00000419642.1	540	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	107.492635406649	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATTTCCTTGCACGCCCT	-3	True	NA	NA	False	NA	NA	NA	44959432	44933187	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_44933200_44933887_44933985_44945167_44945293_44959126
H1_mix_00062440	chr3	-	5963	9	FSM	ENSG00000163814.8	ENST00000296129.6	5963	9	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_2	25.4014640326104	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGGTTTTCAAGTCTCC	5	True	NA	-8	True	AATAAA	-25	NA	45146378	45082276	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_45086068_45089053_45089142_45091172_45091539_45093276_45093658_45095346_45095569_45110472_45110842_45112082_45112446_45118411_45118622_45146205
H1_mix_00062441	chr3	-	1390	4	FSM	ENSG00000163814.8	ENST00000425231.2	1416	4	4	22	4	-22	multi-exon	FALSE	canonical	3	137	junction_2	10.9848380355227	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTAAATTGTTTTTAACG	29	False	NA	-19	True	AATAAA	-20	NA	45146418	45110237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_45110842_45112082_45112446_45118411_45118622_45146205
H1_mix_00062444	chr3	-	1822	1	FSM	ENSG00000249992.2	ENST00000503771.2	1822	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGTGTATGTAGCTTTT	14	True	NA	-3	True	AATACA	-15	NA	45226287	45224465	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_45224500_45226300
H1_mix_00062446	chr3	-	4010	10	FSM	ENSG00000163818.19	ENST00000296135.11	4026	10	0	16	0	11	multi-exon	FALSE	canonical	3	34	junction_9	6.58280588604383	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTAGACAAAGCAAAATGGA	-14	True	NA	NA	False	ATTAAA	-9	NA	45842119	45823331	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_45826333_45827355_45827460_45828438_45828616_45830912_45830991_45831072_45831139_45833049_45833122_45834237_45834299_45835589_45835785_45837926_45838052_45841988
H1_mix_00062448	chr3	-	393	4	FSM	ENSG00000163818.19	ENST00000483279.1	566	4	135	38	66	-38	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTACAGGCATGCACCAC	3491	False	NA	NA	False	NA	NA	NA	45915577	45854448	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_45854538_45854985_45855075_45913119_45913178_45915420
H1_mix_00062449	chr3	-	8514	18	FSM	ENSG00000163820.16	ENST00000296137.7	8514	18	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_17	6.65304259557586	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTTGTCTCTCATTTTT	2	True	NA	-3	True	AATAAA	-20	NA	45995824	45917902	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_45921841_45923655_45923766_45931070_45931282_45936447_45936544_45955248_45955394_45958407_45958620_45959392_45959543_45962224_45962393_45964335_45964455_45965032_45965126_45966276_45968704_45969674_45969766_45973087_45973232_45975238_45975346_45979704_45979831_45981569_45981677_45984855_45985023_45995721
H1_mix_00062450	chr3	-	4851	10	NNC	ENSG00000163827.14	novel	4890	9	NA	NA	0	7069	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.4664112367158	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGATCATTTCCTACGT	10	True	NA	NA	False	NA	NA	NA	46566234	46508315	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_46508348_46515387_46519064_46521521_46521659_46527425_46527582_46529904_46530051_46532772_46532910_46539044_46539202_46545045_46545254_46551466_46551611_46566176
H1_mix_00062451	chr3	-	4890	9	FSM	ENSG00000163827.14	ENST00000395905.8	4890	9	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_7	8.8175960442742	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTGGTTCTAAAAGCTT	-4	True	NA	NA	False	AATAAA	-19	NA	46566302	46515384	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_46519064_46521521_46521659_46527425_46527582_46529904_46530051_46532772_46532910_46539044_46539202_46545045_46545254_46551466_46551611_46566176
H1_mix_00062457	chr3	-	328	2	FSM	ENSG00000226074.5	ENST00000522832.1	328	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCCTGGAGTTTACACAG	NA	False	NA	NA	False	NA	NA	NA	46811341	46809497	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_46809590_46811105
H1_mix_00062459	chr3	-	897	4	FSM	ENSG00000160799.12	ENST00000488069.5	897	4	0	0	0	0	multi-exon	FALSE	canonical	3	627	junction_2	22.3755819291179	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAACCGCTGTCTTTGGG	-12	True	NA	NA	False	NA	NA	NA	46976759	46923042	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_46923669_46925455_46925536_46940997_46941066_46976636
H1_mix_00062460	chr3	-	380	4	FSM	ENSG00000160799.12	ENST00000605875.1	380	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	305.736633213766	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCAAGCTGTCCCTCTC	2435	False	NA	NA	False	NA	NA	NA	46979561	46925455	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_46925536_46940997_46941066_46976636_46976781_46979473
H1_mix_00062462	chr3	-	8631	21	FSM	ENSG00000181555.22	ENST00000409792.4	8541	21	-66	-24	-66	16	multi-exon	FALSE	canonical	3	94	junction_20	31.1289254552739	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATCAAGCATATTTGTGT	NA	False	NA	-4	True	AATAAA	-38	NA	47164179	47016411	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_47017255_47017637_47017740_47019759_47019841_47037665_47037778_47042560_47042701_47046486_47046622_47056820_47057491_47062162_47062347_47067069_47067119_47083719_47084383_47086194_47086315_47088112_47088248_47097954_47098082_47101457_47101556_47103345_47103424_47105996_47106121_47113875_47114005_47116622_47116755_47120181_47124549_47126647_47126664_47163853
H1_mix_00062465	chr3	-	746	3	FSM	ENSG00000088727.14	ENST00000425853.5	740	3	0	-6	0	6	multi-exon	FALSE	canonical	3	15	junction_2	49.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTCTGTCTCCATGTT	265	False	NA	1	True	AATAAA	-28	NA	47282518	47275221	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_47275491_47277281_47277380_47282139
H1_mix_00062466	chr3	-	639	3	FSM	ENSG00000088727.14	ENST00000432493.5	633	3	0	-6	0	6	multi-exon	FALSE	canonical	3	97	junction_2	8.5	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTCTGTCTCCATGTT	17	True	NA	1	True	AATAAA	-28	NA	47282766	47275221	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_47275491_47277281_47277380_47282494
H1_mix_00062468	chr3	-	4235	23	NIC	ENSG00000114650.21	novel	4254	23	NA	NA	0	-12	combination_of_known_junctions	FALSE	canonical	3	393	junction_18	96.3882044153392	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGAGCTACTTGTGTC	-51	True	NA	-11	True	ATTAAA	-36	NA	47475937	47413692	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_47414100_47414179_47414387_47414571_47414653_47414826_47414994_47415097_47415181_47417121_47417208_47417303_47417824_47418133_47418250_47418320_47418523_47418654_47418844_47419327_47419705_47420553_47420773_47420930_47421030_47422441_47422537_47423932_47424046_47425484_47425612_47425996_47426170_47427156_47427263_47427446_47427668_47428512_47428671_47435007_47435138_47442871_47443092_47475798
H1_mix_00062470	chr3	-	4245	23	FSM	ENSG00000114650.21	ENST00000265565.10	4254	23	0	9	0	-9	multi-exon	FALSE	canonical	3	55	junction_7	136.365333322775	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGAGCTACTTGTGTCTCT	-55	True	NA	-8	True	ATTAAA	-39	NA	47475941	47413689	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_47414100_47414179_47414387_47414571_47414653_47414826_47414994_47415097_47415181_47417121_47417208_47417303_47417827_47418133_47418250_47418320_47418523_47418654_47418844_47419327_47419705_47420553_47420773_47420930_47421030_47422441_47422537_47423932_47424046_47425484_47425612_47425996_47426170_47427156_47427263_47427446_47427668_47428512_47428671_47435007_47435138_47442871_47443092_47475798
H1_mix_00062471	chr3	-	3768	20	FSM	ENSG00000114650.21	ENST00000441517.6	3748	20	0	-20	0	-12	multi-exon	FALSE	canonical	3	45	junction_17	143.597101028617	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGAGCTACTTGTGTC	-69	True	NA	-11	True	ATTAAA	-36	NA	47475955	47413692	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_47414100_47414179_47414387_47414571_47414653_47414826_47414994_47415097_47415181_47417121_47417208_47417303_47417824_47418133_47418250_47418320_47418523_47418654_47418844_47419327_47419705_47420553_47420773_47420930_47421030_47422441_47422537_47423932_47424046_47425484_47425612_47425996_47426170_47435007_47435138_47442871_47443092_47475798
H1_mix_00062472	chr3	-	3366	17	NIC	ENSG00000114650.21	novel	3748	20	NA	NA	-11	-12	combination_of_known_junctions	FALSE	canonical	3	80	junction_14	146.254273441838	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGAGCTACTTGTGTC	NA	False	NA	-11	True	ATTAAA	-36	NA	47475966	47413692	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_47414100_47414179_47414387_47414571_47414653_47414826_47414994_47415097_47415181_47417121_47417208_47417303_47417824_47418133_47418250_47418320_47418523_47418654_47418844_47419327_47419705_47420553_47420773_47420930_47421030_47422441_47422537_47435007_47435138_47442871_47443092_47475798
H1_mix_00062477	chr3	-	1300	6	FSM	ENSG00000163832.16	ENST00000442215.6	1277	6	0	-23	0	22	multi-exon	FALSE	canonical	3	30	junction_4	86.2429127522952	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTTCCATCCTGGAAAGG	-12	True	NA	21	True	AATAAA	-41	NA	47513709	47495617	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_47496198_47498285_47498433_47501649_47501852_47504329_47504449_47511147_47511227_47513536
H1_mix_00062483	chr3	-	2253	5	FSM	ENSG00000114646.10	ENST00000264723.9	2154	5	-99	0	-95	0	multi-exon	TRUE	canonical	3	24	junction_4	3.53553390593274	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTTCTTAGTCTTTGT	235	False	NA	-5	True	AATAAA	-17	NA	47578964	47562237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_47562762_47569151_47569228_47572685_47572875_47576832_47577929_47578596
H1_mix_00062485	chr3	-	804	4	FSM	ENSG00000173473.11	ENST00000483847.1	804	4	0	0	0	0	multi-exon	FALSE	canonical	3	1548	junction_1	52.3598658855765	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCCCAAAGTTCTGGCAT	NA	False	NA	NA	False	NA	NA	NA	47678365	47670349	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_47670718_47675474_47675589_47676628_47676783_47678197
H1_mix_00062488	chr3	-	5111	12	NIC	ENSG00000047849.22	novel	9232	21	NA	NA	137	0	combination_of_known_junctions	FALSE	canonical	2	36	junction_11	185.707225367563	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCAGGCTTCGTGCTTCTGT	-1	True	NA	-20	True	AATAAA	-24	NA	47892438	47850694	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_47852939_47853162_47853353_47855247_47855361_47857430_47857513_47867245_47867339_47869213_47869328_47870812_47871106_47871226_47871287_47871916_47872101_47875684_47875901_47877416_47877524_47891023
H1_mix_00062489	chr3	-	3724	10	FSM	ENSG00000047849.22	ENST00000429422.5	3724	10	0	0	0	0	multi-exon	FALSE	canonical	2	33	junction_9	231.55598208534	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCGTGCTTCTGTCTCGT	9527	False	NA	-15	True	AATAAA	-29	NA	47909267	47850689	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_47852939_47853162_47853353_47855247_47855361_47857430_47857513_47870812_47871106_47871226_47871287_47871916_47872101_47875684_47875901_47877416_47877524_47909037
H1_mix_00062491	chr3	-	6182	17	NIC	ENSG00000047849.22	novel	5142	19	NA	NA	-75	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_4	120.263626436882	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCAGGCTTCGTGCTTCTG	NA	False	NA	-21	True	AATAAA	-23	NA	48089347	47850695	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_47853040_47853162_47853353_47855247_47855361_47857430_47857513_47870812_47871106_47871226_47871287_47871916_47872101_47875684_47875901_47877416_47877524_47914816_47914940_47915950_47917175_47918718_47918842_47921764_47921879_47928227_47928351_47977864_47977934_47998637_47998880_48088772
H1_mix_00062492	chr3	-	6221	18	NIC	ENSG00000047849.22	novel	5142	19	NA	NA	-75	0	combination_of_known_splicesites	FALSE	canonical	3	60	junction_13	154.585392578393	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCAGGCTTCGTGCTTCTG	NA	False	NA	-21	True	AATAAA	-23	NA	48089347	47850695	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_47853040_47853162_47853353_47855247_47855361_47857430_47857513_47867245_47867339_47869213_47869328_47870857_47871106_47871226_47871287_47871916_47872101_47875684_47875901_47877416_47877524_47914816_47914940_47915950_47917175_47921764_47921879_47928227_47928351_47977864_47977934_47998637_47998880_48088772
H1_mix_00062493	chr3	-	5544	18	NIC	ENSG00000047849.22	novel	5590	18	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	159.14809972808	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGCAGGCTTCGTGCTTCT	27	True	NA	-22	True	AATAAA	-22	NA	48088839	47850696	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_47852939_47855247_47855361_47857430_47857513_47867245_47867339_47869213_47869328_47870857_47871106_47871226_47871287_47871916_47872101_47875684_47875901_47877416_47877524_47914816_47914940_47915950_47917175_47918718_47918842_47921764_47921879_47928227_47928351_47977864_47977934_47998637_47998880_48088772
H1_mix_00062494	chr3	-	5710	18	NIC	ENSG00000047849.22	novel	5590	18	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	3	32	junction_16	152.968255521307	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGCAGGCTTCGTGCTTCT	27	True	NA	-22	True	AATAAA	-22	NA	48088839	47850696	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_47852939_47853162_47853353_47855247_47855361_47857430_47857513_47867245_47867339_47869213_47869328_47870812_47871106_47871226_47871287_47871916_47872101_47875684_47875901_47877416_47877524_47914816_47914940_47915950_47917175_47918718_47918842_47921764_47921879_47928227_47928351_47998637_47998880_48088772
H1_mix_00062495	chr3	-	5142	19	FSM	ENSG00000047849.22	ENST00000360240.10	5142	19	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_6	75.3862686845081	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGGCCGGCACCCACAC	-14	True	NA	NA	False	GATAAA	-44	NA	48089272	47851867	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_47853040_47853162_47853353_47855247_47855361_47857430_47857513_47867245_47867339_47869213_47869328_47870812_47871106_47871226_47871287_47871916_47872101_47875684_47875901_47877416_47877524_47914816_47914940_47915950_47917175_47918718_47918842_47921764_47921879_47928227_47928351_47977864_47977934_47998637_47998880_48088772
H1_mix_00062497	chr3	-	2750	4	FSM	ENSG00000047849.22	ENST00000439356.2	2743	4	0	-7	0	5	multi-exon	FALSE	canonical	0	0	junction_1	222.252609033555	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTGGATTTGGTTGGGG	434	False	NA	NA	False	AATAAA	-34	NA	48088824	47973078	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_47975466_47977864_47977934_47998637_47998880_48088772
H1_mix_00062498	chr3	-	3789	15	NIC	ENSG00000164045.12	novel	3844	15	NA	NA	9	-28	intron_retention	FALSE	canonical	3	123	junction_11	62.6480695013414	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCTAGTTCTTGATGGA	6	True	NA	0	True	AATAAA	-20	NA	48188393	48157173	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_48159086_48159343_48159456_48164306_48164438_48165635_48165735_48165830_48165894_48167845_48167945_48174283_48174458_48177370_48177443_48177853_48177989_48180720_48180841_48182928_48183028_48183799_48183837_48184652_48184696_48186702_48186780_48187777
H1_mix_00062499	chr3	-	3629	16	NIC	ENSG00000164045.12	novel	3844	15	NA	NA	9	-34	combination_of_known_junctions	FALSE	canonical	3	123	junction_11	75.9694675511156	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTCTCTGCCTAGTTCTT	6	True	NA	-6	True	AATAAA	-14	NA	48188393	48157179	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_48159086_48159343_48159456_48164306_48164438_48165635_48165735_48165830_48165894_48167845_48167945_48174283_48174458_48177370_48177443_48177853_48177989_48180720_48180841_48182928_48183028_48183799_48183837_48184652_48184696_48186702_48186780_48187777_48188216_48188369
H1_mix_00062500	chr3	-	3521	15	NIC	ENSG00000164045.12	novel	3844	15	NA	NA	6	-28	combination_of_known_junctions	FALSE	canonical	3	58	junction_9	93.8371363760921	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCTAGTTCTTGATGGA	3	True	NA	0	True	AATAAA	-20	NA	48188396	48157173	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_48159086_48159343_48159456_48164306_48164438_48165635_48165735_48165830_48165894_48167845_48167945_48174283_48174458_48177370_48177443_48177853_48177989_48182928_48183031_48183799_48183837_48184652_48184696_48186702_48186780_48187777_48188216_48188369
H1_mix_00062501	chr3	-	3649	16	NIC	ENSG00000164045.12	novel	3844	15	NA	NA	6	-20	combination_of_known_junctions	FALSE	canonical	3	142	junction_15	62.6880814473976	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTTGATGGATTTAAGGA	3	True	NA	8	True	AATAAA	-28	NA	48188396	48157165	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_48159086_48159343_48159456_48164306_48164438_48165635_48165735_48165830_48165894_48167845_48167945_48174283_48174458_48177370_48177443_48177853_48177989_48180720_48180841_48182928_48183031_48183799_48183837_48184652_48184696_48186702_48186780_48187777_48188216_48188369
H1_mix_00062502	chr3	-	3845	15	FSM	ENSG00000164045.12	ENST00000302506.8	3844	15	-35	34	-35	-34	multi-exon	FALSE	canonical	3	217	junction_11	42.2360350063926	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTCTCTGCCTAGTTCTT	NA	False	NA	-6	True	AATAAA	-14	NA	48188452	48157179	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48159086_48159343_48159456_48164306_48164438_48165635_48165735_48165830_48165894_48167845_48167945_48174283_48174458_48177370_48177443_48177853_48177989_48180720_48180841_48182928_48183031_48183799_48183837_48184652_48184696_48186702_48186780_48187777
H1_mix_00062505	chr3	-	6545	6	FSM	ENSG00000228638.1_ENSG00000172113.10	ENST00000421967.5	2004	6	-9	-4532	0	1990	multi-exon	FALSE	canonical	3	57	junction_5	42.5064700957395	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGTAATTAAGTCATGAT	8	True	NA	NA	False	NA	NA	NA	48301367	48288731	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48294804_48295074_48295236_48296118_48296159_48296726_48296830_48298426_48298524_48301295
H1_mix_00062506	chr3	-	6766	7	FSM	ENSG00000228638.1_ENSG00000172113.10	ENST00000452211.5	1353	7	-62	-5351	0	1990	multi-exon	FALSE	canonical	2	7	junction_6	70.3027184554212	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGTAATTAAGTCATGAT	8	True	NA	NA	False	NA	NA	NA	48301367	48288731	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48294804_48295074_48295236_48296118_48296159_48296726_48296830_48298426_48298524_48300430_48300635_48301278
H1_mix_00062507	chr3	-	6509	6	FSM	ENSG00000228638.1_ENSG00000172113.10	ENST00000442597.6	2903	6	-21	-3585	0	1990	multi-exon	FALSE	canonical	3	66	junction_5	39.3212410790911	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGTAATTAAGTCATGAT	-13	True	NA	NA	False	NA	NA	NA	48301388	48288731	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48294804_48295074_48295236_48296118_48296159_48296726_48296830_48298426_48298524_48301352
H1_mix_00062508	chr3	-	4776	5	FSM	ENSG00000172113.10	ENST00000451657.6	4776	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	63.8807482736388	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTATTCTGTTCAATTC	NA	False	NA	NA	False	ATTAAA	-11	NA	48301685	48290721	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48294804_48295074_48295236_48296726_48296830_48298426_48298524_48301352
H1_mix_00062510	chr3	-	2052	6	FSM	ENSG00000172113.10	ENST00000643457.1	1320	6	30	-762	0	31	multi-exon	FALSE	canonical	3	41	junction_5	48.3131452091457	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACCAAAATTCAGGACAC	17	True	NA	NA	False	TATAAA	-34	NA	48301358	48293232	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48294804_48295074_48295236_48296118_48296159_48296726_48296830_48298426_48298524_48301278
H1_mix_00062512	chr3	-	1857	11	NNC	ENSG00000164050.13	novel	3264	16	NA	NA	42	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_8	112.238362425688	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGAGTCTGATGTGTGAG	NA	False	NA	-7	True	ATTAAA	-14	NA	48411925	48403855	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_48404591_48405723_48405799_48406822_48406899_48407026_48407092_48409328_48409477_48409570_48409732_48409904_48410078_48410295_48410384_48410454_48410559_48410867_48411037_48411862
H1_mix_00062513	chr3	-	3266	16	FSM	ENSG00000164050.13	ENST00000485535.5	3264	16	0	-2	0	0	multi-exon	FALSE	canonical	3	255	junction_15	49.343962818836	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTCTGATGTGTGAGCC	NA	False	NA	-5	True	ATTAAA	-16	NA	48414006	48403853	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48404591_48405723_48405799_48406822_48406899_48407026_48407092_48409328_48409477_48409570_48409732_48409904_48410078_48410295_48410381_48410454_48410559_48410867_48411037_48411862_48412010_48412237_48412305_48412441_48412621_48412741_48412960_48413068_48413819_48413894
H1_mix_00062514	chr3	-	5591	37	NNC	ENSG00000164050.13	novel	5859	37	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_29	90.0986556332201	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGAGTCTGATGTGTGAG	6851	False	NA	-7	True	ATTAAA	-14	NA	48423574	48403855	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_48404591_48405723_48405799_48406567_48406741_48406822_48406899_48407026_48407092_48409328_48409477_48409570_48409732_48409904_48410078_48410295_48410381_48410454_48410559_48410867_48411037_48411862_48412010_48412237_48412305_48412441_48412621_48412741_48412960_48413068_48413170_48413669_48413819_48413894_48414072_48414798_48415042_48415175_48415348_48415582_48415760_48416030_48416168_48416345_48416452_48417910_48418063_48418190_48418364_48418448_48418543_48418916_48419040_48419243_48419367_48419576_48419675_48420664_48420774_48420847_48420957_48421227_48421385_48421673_48421807_48422104_48422206_48422330_48422460_48422764_48422948_48423504
H1_mix_00062515	chr3	-	7531	38	FSM	ENSG00000164050.13	ENST00000358536.8	7308	38	-221	-2	-203	0	multi-exon	TRUE	canonical	3	72	junction_37	82.738616120385	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTCTGATGTGTGAGCC	4281	False	NA	-5	True	ATTAAA	-16	NA	48429684	48403853	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48404591_48405723_48405799_48406822_48406899_48407026_48407092_48409328_48409477_48409570_48409732_48409904_48410078_48410295_48410381_48410454_48410559_48410867_48411037_48411862_48412010_48412237_48412305_48412441_48412621_48412741_48412960_48413068_48413170_48413669_48413819_48413894_48414072_48414798_48415042_48415175_48415348_48415582_48415760_48416030_48416168_48416345_48416452_48417910_48418063_48418190_48418364_48418448_48418543_48418916_48419040_48419243_48419367_48419576_48420258_48420664_48420774_48420847_48420957_48421227_48421385_48421673_48421807_48422104_48422206_48422330_48422460_48422764_48422948_48423504_48424618_48425280_48425334_48429252
H1_mix_00062516	chr3	-	7356	38	NNC	ENSG00000164050.13	novel	7308	38	NA	NA	-124	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_27	94.8648494648482	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGAGTCTGATGTGTGAG	2	True	NA	-7	True	ATTAAA	-14	NA	48429605	48403855	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_48404591_48405723_48405799_48406822_48406899_48407026_48407092_48409328_48409477_48409570_48409732_48409904_48410078_48410295_48410381_48410454_48410559_48410867_48411037_48411862_48412010_48412237_48412305_48412441_48412621_48412741_48412960_48413068_48413170_48413669_48413819_48413894_48414072_48414798_48415042_48415175_48415348_48415582_48415760_48416030_48416168_48416345_48416452_48417910_48418063_48418190_48418364_48418448_48418543_48418916_48419040_48419243_48419367_48419674_48420258_48420664_48420774_48420847_48420957_48421223_48421385_48421673_48421807_48422104_48422206_48422330_48422460_48422764_48422948_48423504_48424618_48425280_48425334_48429252
H1_mix_00062518	chr3	-	835	4	FSM	ENSG00000164050.13	ENST00000470525.1	835	4	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_3	12.9614813968157	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGAGCCGGAGCCGCCC	NA	False	NA	NA	False	NA	NA	NA	48411967	48410014	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48410078_48410295_48410381_48410454_48411037_48411862
H1_mix_00062524	chr3	-	1461	4	FSM	ENSG00000164051.14	ENST00000447018.5	1461	4	0	0	0	0	multi-exon	TRUE	canonical	3	114	junction_3	55.7992433242204	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTTTTTTTCATTAAGAA	-16	True	NA	4	True	ATTAAA	-35	NA	48440081	48432163	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48433167_48433706_48433872_48434816_48435016_48439987
H1_mix_00062525	chr3	-	1391	4	FSM	ENSG00000164051.14	ENST00000412398.6	1385	4	0	-6	0	0	multi-exon	FALSE	canonical	3	22	junction_3	97.5329004319397	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTTTTTTTCATTAAGAA	11	True	NA	4	True	ATTAAA	-35	NA	48440119	48432163	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48433167_48433706_48433872_48434816_48435016_48440095
H1_mix_00062526	chr3	-	1432	4	NNC	ENSG00000164051.14	novel	1611	4	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_3	96.1491896308371	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCAGACTGAGTTTTTTT	-1	True	NA	-5	True	ATTAAA	-26	NA	48440066	48432172	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_48433167_48433706_48433872_48434816_48435011_48439987
H1_mix_00062527	chr3	-	1741	4	FSM	ENSG00000164051.14	ENST00000395694.7	1611	4	0	-130	0	121	multi-exon	TRUE	canonical	3	87	junction_3	67.8347665696253	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTCCTGAGGCCTAGAT	11	True	NA	NA	False	NA	NA	NA	48440119	48432042	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48433167_48433706_48433872_48434816_48435137_48439987
H1_mix_00062528	chr3	-	1554	4	FSM	ENSG00000164051.14	ENST00000442740.1	1554	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	100.982946855177	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGAGTTTTATTATTTAA	30	False	48440130	-27	True	ATTAAA	-4	NA	48440100	48432194	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48433167_48433706_48433977_48434816_48435016_48439987
H1_mix_00062530	chr3	-	1839	4	FSM	ENSG00000164054.17	ENST00000426002.5	1839	4	0	0	0	0	multi-exon	FALSE	canonical	3	1236	junction_3	341.440412891555	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCCCCCTTTCTTCC	6316	False	NA	-29	True	AATAAA	-15	NA	48473208	48467875	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48469187_48469360_48469574_48469727_48469844_48473009
H1_mix_00062531	chr3	-	1739	4	FSM	ENSG00000164054.17	ENST00000465449.5	1739	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	904.71026669684	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCCCCCTTTCTTCC	5992	False	NA	-29	True	AATAAA	-15	NA	48473532	48467875	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48469187_48469360_48469574_48469727_48469844_48473433
H1_mix_00062532	chr3	-	2034	6	FSM	ENSG00000164054.17	ENST00000296444.7	2034	6	0	0	0	0	multi-exon	FALSE	canonical	3	851	junction_4	522.054173434137	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCCCCCTTTCTTCC	-28	True	NA	-29	True	AATAAA	-15	NA	48504174	48467875	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48469187_48469360_48469574_48469727_48469844_48479176_48479258_48501136_48501294_48504018
H1_mix_00062535	chr3	-	1297	2	FSM	ENSG00000164054.17	ENST00000460758.1	1297	2	0	0	0	0	multi-exon	FALSE	canonical	3	1236	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGCTGCTGCTTGAGGC	14	True	NA	NA	False	NA	NA	NA	48473127	48468664	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48469844_48473009
H1_mix_00062536	chr3	-	3507	14	FSM	ENSG00000114268.12	ENST00000232375.8	3499	14	0	-8	0	8	multi-exon	TRUE	canonical	3	55	junction_6	8.21673858044713	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTGGTAGCCAGTTCT	-2	True	NA	-22	True	AATAAA	-26	NA	48556803	48517675	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48519807_48521985_48522051_48523536_48523600_48523700_48523831_48525564_48525670_48535511_48535659_48536255_48536464_48538497_48538620_48539253_48539311_48539696_48539772_48543579_48543647_48549863_48549961_48550117_48550235_48556680
H1_mix_00062543	chr3	-	1147	4	FSM	ENSG00000010256.11	ENST00000480561.5	1014	4	-133	0	-133	0	multi-exon	FALSE	canonical	3	3407	junction_2	85.0215658916411	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGTGACCACCAATAAAATC	8673	False	NA	-46	True	NA	NA	NA	48600974	48599033	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48599711_48600062_48600152_48600481_48600568_48600679
H1_mix_00062544	chr3	-	714	6	FSM	ENSG00000010256.11	ENST00000460105.1	622	6	-92	0	-92	0	multi-exon	FALSE	canonical	3	3343	junction_5	78.9445374931033	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGACCTATGGCCGCC	5911	False	NA	NA	False	NA	NA	NA	48603736	48600117	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48600152_48600481_48600568_48600679_48600841_48600974_48601119_48601351_48601468_48603563
H1_mix_00062545	chr3	-	2615	21	FSM	ENSG00000225697.13	ENST00000395550.7	2611	21	0	-4	0	4	multi-exon	FALSE	canonical	2	97	junction_4	46.0480998522197	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTCTGCTGTGGCTTGGT	-6	True	NA	-1	True	AATAAA	-20	NA	48635461	48625718	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48626001_48626217_48626355_48626630_48626686_48626875_48627056_48627945_48628039_48628433_48628542_48628621_48628715_48629641_48629712_48629871_48629979_48630061_48630158_48630437_48630516_48630606_48630721_48630992_48631141_48631223_48631307_48631648_48631802_48631879_48632045_48632244_48632397_48632973_48633085_48633250_48633391_48633476_48633636_48635370
H1_mix_00062546	chr3	-	2634	21	FSM	ENSG00000225697.13	ENST00000420764.6	2630	21	0	-4	0	4	multi-exon	FALSE	canonical	2	116	junction_5	42.8460908368546	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTCTGCTGTGGCTTGGT	-28	True	NA	-1	True	AATAAA	-20	NA	48635483	48625718	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48626001_48626217_48626355_48626630_48626686_48626875_48627053_48627945_48628039_48628433_48628542_48628621_48628715_48629641_48629712_48629871_48629979_48630061_48630158_48630437_48630516_48630606_48630721_48630992_48631141_48631223_48631307_48631648_48631802_48631879_48632045_48632244_48632397_48632973_48633085_48633250_48633391_48633476_48633636_48635370
H1_mix_00062550	chr3	-	910	9	FSM	ENSG00000225697.13	ENST00000421649.5	910	9	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_6	62.3011837768754	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCATCTTCTCCCTGCTG	3088	False	NA	NA	False	NA	NA	NA	48632367	48629914	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48629979_48630061_48630158_48630437_48630516_48630606_48630721_48630992_48631141_48631223_48631307_48631762_48631802_48631879_48632045_48632244
H1_mix_00062552	chr3	-	2706	6	ISM	ENSG00000225697.13	ENST00000395550.7	2611	21	0	5926	0	0	intron_retention	FALSE	canonical	3	173	junction_3	17.1230838344032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCGAGGGCCAGGGAGTGG	-6	True	NA	NA	False	NA	NA	NA	48635461	48631648	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_48631802_48631879_48632045_48632244_48632397_48632973_48633085_48633250_48633391_48633476
H1_mix_00062554	chr3	-	11997	35	FSM	ENSG00000008300.17	ENST00000164024.5	11933	35	-64	0	-64	0	multi-exon	FALSE	canonical	2	5	junction_34	19.3006624480678	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTGCCTTTTCCTGTTG	1137	False	NA	-3	True	AATAAA	-16	NA	48662950	48636462	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48638233_48639673_48640560_48641323_48641525_48641850_48642010_48642357_48642468_48642735_48642885_48642966_48643084_48643553_48643678_48644215_48644296_48644715_48644829_48645034_48645210_48645442_48645650_48645741_48645869_48646089_48646258_48646762_48646929_48647840_48647997_48648265_48648462_48648718_48648929_48649120_48649216_48650479_48650582_48650891_48651076_48651358_48651480_48651576_48651719_48651876_48652049_48652436_48652554_48653001_48653188_48653618_48653789_48653877_48654004_48654288_48654453_48655043_48655202_48655305_48655395_48655735_48655852_48656139_48656366_48656697_48657349_48658886
H1_mix_00062556	chr3	-	3970	8	FSM	ENSG00000008300.17	ENST00000461362.5	3633	8	-201	-136	-201	0	multi-exon	FALSE	canonical	3	63	junction_4	6.34388666033558	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTGCCTTTTCCTGTTG	NA	False	NA	-3	True	AATAAA	-16	NA	48644131	48636462	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48638233_48639673_48640560_48641323_48641525_48641850_48642010_48642357_48642468_48642735_48642885_48642966_48643084_48643553
H1_mix_00062557	chr3	-	2929	13	FSM	ENSG00000213672.8	ENST00000416649.6	2925	13	0	-4	0	4	multi-exon	FALSE	canonical	3	71	junction_10	32.2141273356892	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCTGTATGATCTTGGG	0	True	NA	-1	True	AATAAA	-22	NA	48685884	48673839	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48674748_48678563_48678737_48678876_48678970_48679054_48679184_48679376_48679458_48679574_48679714_48679800_48679888_48680058_48680230_48681286_48681781_48682044_48682136_48682347_48682553_48682902_48683013_48685636
H1_mix_00062560	chr3	-	803	5	FSM	ENSG00000213672.8	ENST00000415281.1	803	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	72.3407734268856	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCAACCTGCACCTGCCA	4300	False	NA	NA	False	NA	NA	NA	48681584	48679075	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48679184_48679574_48679714_48679800_48679888_48680058_48680230_48681286
H1_mix_00062566	chr3	-	1169	3	NIC	ENSG00000068745.15	novel	1260	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	169	junction_1	57	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTGTAATTCTTTGG	2	True	NA	0	True	AATAAA	-21	NA	48717203	48693447	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_48694241_48695089_48695419_48717156
H1_mix_00062567	chr3	-	1185	3	FSM	ENSG00000068745.15	ENST00000340879.8	1185	3	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_1	103.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTGTAATTCTTTGG	-11	True	NA	0	True	AATAAA	-21	NA	48717216	48693447	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48694241_48695089_48695422_48717156
H1_mix_00062568	chr3	-	1314	4	FSM	ENSG00000068745.15	ENST00000432678.6	1309	4	0	-5	0	0	multi-exon	FALSE	canonical	3	19	junction_1	154.615652506465	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTGTAATTCTTTGG	NA	False	NA	0	True	AATAAA	-21	NA	48717278	48693447	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48694241_48694458_48694526_48695089_48695422_48717156
H1_mix_00062569	chr3	-	1260	4	FSM	ENSG00000068745.15	ENST00000416707.1	1260	4	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	78.6652542246081	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTACATAAAAATTAATAAA	2	True	NA	-40	True	TATAAA	-34	NA	48717203	48693487	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48694241_48694693_48694825_48695089_48695419_48717156
H1_mix_00062570	chr3	-	1673	2	FSM	ENSG00000068745.15	ENST00000449610.5	1673	2	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACATATTTTATAAGAACAAA	13	True	NA	29	True	AATAAA	-2	NA	48717192	48693784	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48695422_48717156
H1_mix_00062572	chr3	-	6494	11	FSM	ENSG00000114302.16	ENST00000265563.13	6492	11	5	-7	5	7	multi-exon	FALSE	canonical	3	77	junction_3	4.43734154646676	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGGTGCAGTCTTATG	-25	True	NA	-22	True	AATAAA	-21	NA	48847869	48746578	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48751719_48752175_48752318_48756378_48756445_48765003_48765079_48765247_48765350_48772954_48773109_48782985_48783093_48790543_48790628_48793996_48794050_48807648_48807685_48847334
H1_mix_00062577	chr3	-	1019	1	FSM	ENSG00000221883.4	ENST00000647812.1	1042	1	24	-1	24	1	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCTGGCTGGTCGCTG	1102	False	NA	NA	False	AATAAA	-36	NA	48918799	48917780	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48917800_48918800
H1_mix_00062578	chr3	-	1706	12	FSM	ENSG00000178149.17	ENST00000441576.6	1706	12	0	0	0	0	multi-exon	TRUE	canonical	3	43	junction_3	52.1750074744477	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTCTTGTCATGGGGA	11	True	NA	-13	True	AATAAA	-21	NA	49018564	49015487	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49015708_49015803_49015873_49015972_49016061_49016157_49016341_49016428_49016512_49016611_49016674_49016773_49016848_49017227_49017357_49017433_49017514_49017612_49017870_49018022_49018319_49018399
H1_mix_00062579	chr3	-	1748	12	FSM	ENSG00000178149.17	ENST00000341949.9	1748	12	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_11	29.7151768552232	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTCTTGTCATGGGGA	-5	True	NA	-13	True	AATAAA	-21	NA	49018580	49015487	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49015708_49015803_49015873_49015972_49016087_49016157_49016341_49016428_49016512_49016611_49016674_49016773_49016848_49017227_49017357_49017433_49017514_49017612_49017870_49018022_49018319_49018399
H1_mix_00062580	chr3	-	1592	6	FSM	ENSG00000178149.17	ENST00000467457.5	1591	6	0	-1	0	0	multi-exon	FALSE	canonical	3	12	junction_2	72.9805453528541	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACGGCCAAAATAAATTGG	3483	False	NA	-49	True	AAAAAG	-8	NA	49018021	49015523	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49016341_49016428_49016512_49016773_49016848_49017227_49017357_49017433_49017514_49017612
H1_mix_00062582	chr3	-	691	3	FSM	ENSG00000178035.13	ENST00000466147.5	691	3	0	0	0	0	multi-exon	FALSE	canonical	3	2135	junction_1	123.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGCCTGATCTTTCAAC	7973	False	NA	31	True	AATAAA	-18	NA	49025193	49024324	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49024803_49024895_49025041_49025125
H1_mix_00062583	chr3	-	1651	14	FSM	ENSG00000178035.13	ENST00000326739.9	1651	14	0	0	0	0	multi-exon	FALSE	canonical	3	1231	junction_1	273.715007490353	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGCCTGATCTTTCAAC	5	True	NA	31	True	AATAAA	-18	NA	49029398	49024324	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028323_49028430_49028533_49028757_49028807_49029252
H1_mix_00062585	chr3	-	420	2	FSM	ENSG00000178035.13	ENST00000463903.1	420	2	0	0	0	0	multi-exon	FALSE	canonical	3	1231	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGATGCCTGATCTTT	8328	False	NA	27	True	AATAAA	-14	NA	49024838	49024328	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49024405_49024494
H1_mix_00062587	chr3	-	3597	6	FSM	ENSG00000178035.13	ENST00000679019.1	3597	6	0	0	0	0	multi-exon	FALSE	canonical	3	2005	junction_3	129.870088935058	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTCACCCTGTCCTTGG	3790	False	NA	NA	False	NA	NA	NA	49029376	49024494	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49025041_49025125_49026420_49026518_49027048_49027709_49027917_49028247_49028323_49028430
H1_mix_00062591	chr3	-	1356	12	FSM	ENSG00000172053.18	ENST00000637281.1	1327	12	0	-29	0	29	multi-exon	FALSE	canonical	1	5	junction_7	217.250169996795	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAAGGCCCTGAAGACAT	4857	False	NA	26	True	NA	NA	NA	49100241	49095902	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49096080_49097991_49098118_49098191_49098259_49098352_49098481_49098599_49098693_49098884_49098990_49099109_49099254_49099329_49099432_49099509_49099648_49099760_49099854_49099960_49100092_49100189
H1_mix_00062593	chr3	-	2399	24	FSM	ENSG00000172053.18	ENST00000430182.5	2399	24	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_22	157.862793671305	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTGTGTTATCTCTGC	-4	True	NA	-4	True	AATAAA	-21	NA	49104757	49095932	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49096080_49097991_49098118_49098191_49098259_49098352_49098481_49098599_49098693_49098884_49098990_49099109_49099254_49099343_49099432_49099509_49099648_49099760_49099854_49099960_49100092_49100189_49100299_49100379_49100459_49100574_49100675_49101354_49101442_49101619_49101706_49101827_49101900_49102204_49102266_49102418_49102473_49103344_49103410_49103630_49103707_49103862_49103973_49104372_49104472_49104616
H1_mix_00062594	chr3	-	681	4	FSM	ENSG00000172053.18	ENST00000494984.5	679	4	0	-2	0	0	multi-exon	FALSE	canonical	3	709	junction_3	62.3449187094577	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGTGTTATCTCTGCA	6406	False	NA	-3	True	AATAAA	-22	NA	49098692	49095931	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49096080_49097991_49098118_49098191_49098259_49098352
H1_mix_00062595	chr3	-	2364	23	FSM	ENSG00000172053.18	ENST00000464962.6	2362	23	0	-2	0	0	multi-exon	FALSE	canonical	3	589	junction_18	64.6352768096839	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGAGTCTGTGTGTTATCT	-33	True	NA	-8	True	AATAAA	-17	NA	49104532	49095936	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49096080_49097991_49098118_49098191_49098259_49098352_49098481_49098599_49098693_49098884_49098990_49099109_49099254_49099343_49099432_49099509_49099648_49099760_49099854_49099960_49100092_49100189_49100299_49100379_49100459_49100574_49100675_49101354_49101442_49101619_49101706_49101827_49101900_49102204_49102266_49102418_49102473_49103344_49103410_49103630_49103707_49103862_49103973_49104323
H1_mix_00062598	chr3	-	3908	24	ISM	ENSG00000172046.20	ENST00000398896.6	4366	26	2834	-1	-267	1	3prime_fragment	FALSE	canonical	3	38	junction_21	75.5698452577967	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGTGATCCACCACATG	2938	False	NA	-15	True	AATAAA	-21	NA	49117978	49108044	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_49108529_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112403_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115945_49116046_49116163_49116279_49116352_49116450_49116608_49116726_49116944_49117436_49117571_49117656_49117786_49117946
H1_mix_00062599	chr3	-	4699	27	NIC	ENSG00000172046.20	novel	4721	27	NA	NA	17	1	combination_of_known_junctions	FALSE	canonical	3	61	junction_20	60.1190633256035	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGTGATCCACCACATG	17	True	NA	-15	True	AATAAA	-21	NA	49120790	49108044	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_49108529_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112403_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115945_49116046_49116163_49116279_49116352_49116450_49116608_49116720_49116944_49117058_49117362_49117436_49117571_49117656_49117831_49117946_49118121_49119021_49119282_49120755
H1_mix_00062603	chr3	-	4701	27	NNC	ENSG00000172046.20	novel	4721	27	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_22	69.2978414411471	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACTGTGATCCACCACAT	-1	True	NA	-16	True	AATAAA	-20	NA	49120808	49108045	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_49108529_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112403_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115939_49116046_49116163_49116279_49116352_49116450_49116608_49116726_49116944_49117058_49117359_49117436_49117571_49117656_49117831_49117946_49118121_49119021_49119282_49120755
H1_mix_00062604	chr3	-	4559	26	FSM	ENSG00000172046.20	ENST00000398888.6	4559	26	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_21	81.5396443455575	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCGTCTCTCTGTCTCA	-22	True	NA	-2	True	AATAAA	-19	NA	49120938	49108674	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49109186_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112403_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115939_49116046_49116163_49116279_49116352_49116450_49116608_49116726_49116944_49117436_49117571_49117656_49117831_49117946_49118121_49119021_49119282_49120755
H1_mix_00062605	chr3	-	4677	27	FSM	ENSG00000172046.20	ENST00000434032.6	4677	27	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	67.530718410173	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGGCCTCAGGCTTGGC	85	False	NA	-80	True	NA	NA	NA	49120831	49108752	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49109186_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112403_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115939_49116046_49116163_49116279_49116352_49116450_49116608_49116726_49116944_49117058_49117362_49117436_49117571_49117656_49117831_49117946_49118121_49119021_49119282_49120755
H1_mix_00062609	chr3	-	5595	33	NNC	ENSG00000172037.14	novel	5674	33	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_3	52.0584763601231	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTCTGGACTCTGAT	-16	True	NA	0	True	AATAAA	-18	NA	49133044	49121112	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_49121363_49121432_49121593_49121683_49121855_49121943_49122086_49122162_49122371_49122703_49123053_49123131_49123374_49123446_49123632_49123727_49124101_49124189_49124287_49124394_49124613_49124700_49124926_49125005_49125170_49125252_49125485_49125746_49125891_49125966_49126160_49126364_49126498_49128457_49128586_49128660_49128820_49129019_49129153_49129244_49129325_49129603_49129717_49129838_49130019_49130230_49130420_49130739_49130861_49130949_49131153_49131378_49131443_49131534_49131724_49132115_49132190_49132269_49132406_49132490_49132664_49132791_49132869_49132954
H1_mix_00062611	chr3	-	5627	33	FSM	ENSG00000172037.14	ENST00000418109.5	5674	33	47	0	-15	0	multi-exon	FALSE	canonical	3	78	junction_32	45.3114224009796	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGTCTGGACTCTGA	22	False	49133093	-1	True	AATAAA	-17	NA	49133071	49121113	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49121363_49121432_49121593_49121683_49121861_49121943_49122086_49122162_49122371_49122703_49123053_49123131_49123374_49123446_49123632_49123727_49124101_49124189_49124287_49124394_49124613_49124700_49124926_49125005_49125170_49125252_49125485_49125746_49125891_49125966_49126160_49126364_49126498_49128457_49128586_49128660_49128820_49129019_49129153_49129244_49129325_49129603_49129717_49129838_49130019_49130230_49130420_49130739_49130861_49130949_49131153_49131378_49131443_49131534_49131724_49132115_49132190_49132269_49132406_49132490_49132664_49132791_49132869_49132954
H1_mix_00062612	chr3	-	1021	5	FSM	ENSG00000172037.14	ENST00000498377.1	1021	5	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_1	9.86154146165801	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGGTGCAGATCTACAACA	10042	False	NA	NA	False	NA	NA	NA	49122598	49121256	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49121363_49121432_49121593_49121683_49121861_49121943_49122086_49122162
H1_mix_00062613	chr3	-	563	3	FSM	ENSG00000172037.14	ENST00000480640.1	563	3	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_2	12.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCCTAAGAATACATGGTG	8614	False	NA	NA	False	NA	NA	NA	49124479	49123719	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49124101_49124189_49124287_49124394
H1_mix_00062616	chr3	-	7667	23	Fusion	ENSG00000114316.13_ENSG00000188315.8	novel	3222	21	NA	NA	0	99	intron_retention	FALSE	canonical	3	17	junction_2	60.2924004640635	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATCTAAAGTTATCCCCA	4	True	NA	96	True	NA	NA	NA	49340033	49268496	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr3_-_49271446_49274048_49274141_49276426_49278452_49278813_49278903_49280743_49280848_49283986_49284137_49284465_49284585_49284848_49284920_49286097_49286326_49292509_49292599_49294406_49294599_49297869_49297965_49298551_49298636_49300466_49300692_49302383_49302543_49305714_49305889_49310619_49310738_49324701_49324764_49324893_49325040_49325718_49325846_49327685_49327817_49335468_49335597_49339923
H1_mix_00062618	chr3	-	4070	22	FSM	ENSG00000114316.13	ENST00000265560.9	4070	22	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_16	33.2917427608472	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGTAGGGCCAGCGGCCT	-16	True	NA	NA	False	NA	NA	NA	49340053	49277143	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49278452_49278813_49278903_49280743_49280848_49283986_49284137_49284465_49284585_49284848_49284920_49286097_49286326_49292509_49292599_49294406_49294599_49297869_49297965_49298551_49298636_49300466_49300692_49302383_49302543_49305714_49305889_49310619_49310738_49311513_49311655_49324701_49324764_49324893_49325040_49325718_49325846_49327685_49327817_49335468_49335597_49339923
H1_mix_00062619	chr3	-	3222	21	FSM	ENSG00000114316.13	ENST00000351842.8	3222	21	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_15	32.0019921254912	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCACTGATATGGGTT	4	True	NA	-38	True	AGTAAA	-17	NA	49340033	49277830	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49278452_49278813_49278903_49280743_49280848_49283986_49284137_49284465_49284585_49284848_49284920_49286097_49286326_49292509_49292599_49294406_49294599_49297869_49297965_49298551_49298636_49300466_49300692_49302383_49302543_49305714_49305889_49310619_49310738_49324701_49324764_49324893_49325040_49325718_49325846_49327685_49327817_49335468_49335597_49339923
H1_mix_00062621	chr3	-	3303	22	NIC	ENSG00000114316.13	novel	4070	22	NA	NA	2	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	53.5568869152644	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGCTATGTGCACTGATATG	6	True	NA	-42	True	AGTAAA	-13	NA	49340031	49277834	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_49278452_49278813_49278903_49280743_49280848_49283986_49284137_49284465_49284585_49284848_49284920_49286097_49286326_49292509_49292599_49294406_49294599_49297869_49297965_49298551_49298636_49300466_49300692_49302437_49302543_49305714_49305889_49310619_49310738_49311513_49311655_49324701_49324764_49324893_49325040_49325718_49325846_49327685_49327817_49335468_49335597_49339923
H1_mix_00062624	chr3	-	1848	6	NNC	ENSG00000067560.14	novel	1805	5	NA	NA	0	76132	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1212.271190782	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCGGCACAGTGGCTCACA	-20	True	NA	NA	False	AAAAAG	-2	NA	49411994	49283006	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_49283036_49359148_49360383_49362495_49362627_49368427_49368549_49375433_49375592_49411819
H1_mix_00062626	chr3	-	1853	6	NNC	ENSG00000067560.14	novel	1805	5	NA	NA	0	76130	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1142.00833622176	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCGGCACAGTGGCTCA	-26	True	NA	NA	False	NA	NA	NA	49412000	49283008	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_49283035_49359144_49360383_49362495_49362627_49368427_49368549_49375435_49375592_49411819
H1_mix_00062628	chr3	-	1534	7	FSM	ENSG00000114316.13	ENST00000415188.1	1454	7	0	-80	0	80	multi-exon	FALSE	canonical	2	13	junction_1	80.5655357802302	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATGATTGAATGAATGAA	1	True	NA	NA	False	AATAAA	-22	NA	49340036	49316651	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49317479_49324701_49324764_49324893_49325040_49325718_49325846_49327685_49327817_49335468_49335597_49339923
H1_mix_00062629	chr3	-	899	2	FSM	ENSG00000233276.8	ENST00000419783.3	899	2	0	0	0	0	multi-exon	FALSE	canonical	3	2377	junction_1	0	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTATGTCCTGTGTC	10	True	NA	-14	True	AATAAA	-20	NA	49358353	49357175	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49357748_49358026
H1_mix_00062630	chr3	-	1971	5	FSM	ENSG00000067560.14	ENST00000679208.1	1971	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1233.80042956712	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTATCCTGTTGTTT	448	False	NA	-10	True	AATAAA	-15	NA	49411645	49359144	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49360383_49362495_49362627_49368427_49368549_49375433_49375592_49411322
H1_mix_00062631	chr3	-	1938	6	FSM	ENSG00000067560.14	ENST00000422781.6	1944	6	0	6	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1186.04714914712	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTATCCTGTTGTTT	4	True	NA	-10	True	AATAAA	-15	NA	49411970	49359144	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49360383_49360927_49361067_49362495_49362627_49368427_49368549_49375433_49375592_49411819
H1_mix_00062632	chr3	-	1805	5	FSM	ENSG00000067560.14	ENST00000418115.6	1805	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1076.37966698559	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTATCCTGTTGTTT	-2	True	NA	-10	True	AATAAA	-15	NA	49411976	49359144	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49360383_49362495_49362627_49368427_49368549_49375433_49375592_49411819
H1_mix_00062633	chr3	-	3949	4	FSM	ENSG00000067560.14	ENST00000678921.2	3941	4	0	-8	0	7	multi-exon	FALSE	canonical	3	2243	junction_1	192.915064788166	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTTGTGTTGCTCTCTC	-20	True	NA	3	True	AATAAA	-28	NA	49411994	49359131	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49362627_49368427_49368549_49375433_49375592_49411819
H1_mix_00062634	chr3	-	1590	3	FSM	ENSG00000067560.14	ENST00000676712.2	1582	3	0	-8	0	7	multi-exon	FALSE	canonical	3	721	junction_1	846.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTTGTGTTGCTCTCTC	-26	True	NA	3	True	AATAAA	-28	NA	49412000	49359131	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49360383_49375433_49375592_49411819
H1_mix_00062635	chr3	-	1997	9	FSM	ENSG00000145020.16	ENST00000273588.9	1997	9	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_3	76.9086308550607	3735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTAGCTTCATTGTTCT	-11	True	NA	-7	True	ATTAAA	-19	NA	49422473	49416777	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49419789_49420210_49420343_49421491_49421573_49422103_49422272_49422360
H1_mix_00062636	chr3	-	1845	8	NIC	ENSG00000145020.16	novel	2038	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	8	junction_1	213.10953397112	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTAGCTTCATTGTTCT	6801	False	NA	-7	True	ATTAAA	-19	NA	49422491	49416777	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_49417719_49418970_49419152_49419259_49419406_49419709_49419789_49420210_49420343_49421491_49421573_49422103_49422258_49422360
H1_mix_00062637	chr3	-	1831	10	FSM	ENSG00000145020.16	ENST00000395338.7	1831	10	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	156.624107694541	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTAGCTTCATTGTTCT	6738	False	NA	-7	True	ATTAAA	-19	NA	49422554	49416777	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49417368_49417614_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49419789_49420210_49420343_49421491_49421573_49422103_49422272_49422360
H1_mix_00062640	chr3	-	2022	10	NIC	ENSG00000145020.16	novel	2260	9	NA	NA	0	-2	intron_retention	FALSE	canonical	3	11	junction_3	231.09967920444	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTCTCTAGCTTCATTG	8	True	NA	-11	True	ATTAAA	-15	NA	49422454	49416781	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_49417719_49417817_49417974_49418166_49418229_49418970_49419152_49419259_49419406_49419709_49419789_49420210_49420343_49421491_49421573_49422103_49422258_49422360
H1_mix_00062644	chr3	-	1831	9	FSM	ENSG00000145020.16	ENST00000636070.1	1827	9	0	-4	0	0	multi-exon	FALSE	canonical	2	6	junction_8	218.123495696819	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACTGAATCCTGAAAAAAAA	11	True	NA	-51	True	NA	NA	NA	49422451	49416821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49419789_49420210_49420343_49421491_49421573_49421981_49422050_49422360
H1_mix_00062646	chr3	-	2768	6	FSM	ENSG00000145020.16	ENST00000635772.1	2768	6	0	0	0	0	multi-exon	FALSE	canonical	3	495	junction_5	41.8788729552265	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACTGAATCCTGAAAAAAAA	8	True	NA	-51	True	NA	NA	NA	49422454	49416821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49417719_49417817_49417974_49418970_49420343_49421491_49421573_49422103_49422272_49422360
H1_mix_00062647	chr3	-	2470	7	FSM	ENSG00000145020.16	ENST00000637994.1	2468	7	0	-2	0	0	multi-exon	FALSE	canonical	3	453	junction_3	55.1344316698336	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACTGAATCCTGAAAAAAAA	2	True	NA	-51	True	NA	NA	NA	49422460	49416821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49417719_49417817_49417974_49418970_49419406_49419709_49420343_49421491_49421573_49422103_49422272_49422360
H1_mix_00062651	chr3	-	1999	8	FSM	ENSG00000145020.16	ENST00000637114.1	1991	8	0	-8	0	0	multi-exon	FALSE	canonical	3	447	junction_4	60.8832941799644	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTGCCCCTGGTATGCA	-5	True	NA	-82	True	NA	NA	NA	49422442	49416852	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49417719_49417817_49417974_49418970_49419406_49419709_49419789_49420210_49420343_49421491_49421573_49422103_49422272_49422360
H1_mix_00062654	chr3	-	5083	12	FSM	ENSG00000283189.2	ENST00000636461.1	5083	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_10	254.800748600948	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTGGAGAGGATAAAACC	54	False	NA	NA	False	NA	NA	NA	49429238	49417202	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49420343_49421491_49421573_49422103_49424875_49424948_49425054_49425366_49425439_49425882_49425997_49426251_49426429_49429107
H1_mix_00062655	chr3	-	3213	6	FSM	ENSG00000145029.14	ENST00000273598.8	3227	6	14	0	-2	0	multi-exon	FALSE	canonical	3	11	junction_4	9.76524449258696	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGGAGGGAAGCGGCTG	-18	True	NA	NA	False	NA	NA	NA	49429310	49422332	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49424875_49424948_49425054_49425366_49425439_49425882_49425997_49426251_49426429_49429107
H1_mix_00062657	chr3	-	4495	7	NNC	ENSG00000176095.12	novel	4471	6	NA	NA	0	30946	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	68.0849143023295	2126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGGCACACTGGCTCAC	-8	True	NA	NA	False	NA	NA	NA	49786540	49693347	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_49693374_49724293_49727656_49728102_49728279_49732790_49732973_49738211_49738423_49747817_49748169_49786353
H1_mix_00062659	chr3	-	6108	10	FSM	ENSG00000173540.14	ENST00000480687.5	6108	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_9	71.6360830522002	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTTGCAGACAATGGCG	-5	True	NA	-16	True	AATAAA	-23	NA	49723951	49716843	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49721884_49721964_49722148_49722230_49722359_49722431_49722511_49722595_49722755_49722971_49723115_49723253_49723303_49723391_49723473_49723597_49723732_49723839
H1_mix_00062660	chr3	-	3144	9	FSM	ENSG00000173540.14	ENST00000308388.7	3144	9	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_3	22.868851632734	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTCTTCCAGACTCCCC	-5	True	NA	-8	True	AATAAA	-19	NA	49723951	49719915	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49721884_49721964_49722148_49722230_49722359_49722431_49722511_49722595_49722755_49722971_49723115_49723253_49723303_49723391_49723473_49723597
H1_mix_00062662	chr3	-	4119	5	FSM	ENSG00000176095.12	ENST00000395238.5	4117	5	0	-2	0	1	multi-exon	FALSE	canonical	3	34	junction_4	66.7944608481871	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAGTCTGTCTTTGTGAAA	-8	True	NA	0	True	AATAAA	-17	NA	49786540	49724292	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49727656_49728102_49728279_49732790_49732973_49738211_49738423_49786353
H1_mix_00062664	chr3	-	2029	15	FSM	ENSG00000183763.9	ENST00000331456.7	2023	15	0	-6	0	6	multi-exon	TRUE	canonical	3	101	junction_8	12.4146062756574	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGGTTCTGAGAGTGT	-16	True	NA	-9	True	AATAAA	-25	NA	49856564	49828594	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49829226_49829457_49829509_49829616_49829767_49830019_49830069_49831915_49832069_49839771_49839861_49840283_49840374_49840984_49841073_49841825_49841940_49842452_49842548_49843800_49843929_49844540_49844581_49847524_49847609_49848142_49848201_49856355
H1_mix_00062665	chr3	-	1038	2	FSM	ENSG00000183763.9	ENST00000491060.1	1046	2	8	0	8	0	multi-exon	FALSE	canonical	3	131	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATTAAAAAAAAAAAACAA	NA	False	NA	-35	True	NA	NA	NA	49829766	49828620	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49829509_49829616
H1_mix_00062669	chr3	-	3719	12	FSM	ENSG00000164076.17	ENST00000488336.5	2905	12	3	-817	0	816	multi-exon	FALSE	canonical	1	86	junction_6	89.1630505690382	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCTCAAGCATAACTGATC	12	True	NA	35	True	NA	NA	NA	49869903	49857171	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49859677_49859769_49859882_49860170_49860259_49860470_49860550_49860715_49860853_49860942_49861019_49861179_49861301_49861438_49861578_49861790_49861866_49862044_49862177_49862293_49862403_49869757
H1_mix_00062672	chr3	-	4626	19	FSM	ENSG00000164078.14	ENST00000344206.8	4198	19	-263	-165	1	2	multi-exon	FALSE	canonical	2	5	junction_9	4.61345322045038	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAGCAAACAGTGTGAAAGA	0	True	NA	-5	True	AATAAA	-29	NA	49903872	49886999	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49887563_49889923_49890061_49890484_49890651_49891196_49891307_49891398_49891581_49891757_49891839_49895166_49895374_49895446_49895549_49895714_49895881_49896194_49896405_49896539_49896634_49896728_49896891_49897279_49897417_49897519_49897686_49898050_49898212_49898517_49898689_49898866_49898996_49899074_49899264_49902379
H1_mix_00062673	chr3	-	4773	20	FSM	ENSG00000164078.14	ENST00000296474.8	4772	20	1	-2	1	2	multi-exon	FALSE	canonical	2	5	junction_17	4.30293335494099	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAGCAAACAGTGTGAAAGA	0	True	NA	-5	True	AATAAA	-29	NA	49903872	49886999	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49887563_49889923_49890061_49890484_49890651_49891196_49891307_49891398_49891581_49891757_49891839_49895166_49895374_49895446_49895549_49895714_49895881_49895960_49896108_49896194_49896405_49896539_49896634_49896728_49896891_49897279_49897417_49897519_49897686_49898050_49898212_49898517_49898689_49898866_49898996_49899074_49899264_49902379
H1_mix_00062674	chr3	-	2105	6	FSM	ENSG00000164077.15	ENST00000296473.8	2025	6	-76	-4	0	4	multi-exon	FALSE	canonical	3	51	junction_3	10.6845683113545	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCAAGCTCTGTCACTT	-11	True	NA	-6	True	ATTAAA	-18	NA	49929887	49908868	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49909155_49909252_49909401_49910118_49910885_49911525_49912012_49913219_49913360_49929608
H1_mix_00062675	chr3	-	2437	3	FSM	ENSG00000164077.15	ENST00000486107.5	2431	3	0	-6	0	4	multi-exon	FALSE	canonical	3	7	junction_1	35	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCAAGCTCTGTCACTT	-13	True	NA	-6	True	ATTAAA	-18	NA	49929889	49908868	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49910885_49913219_49913360_49929608
H1_mix_00062676	chr3	-	244	1	FSM	ENSG00000281691.1	ENST00000630404.1	1386	1	1317	-175	1317	175	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTAGCCAAGTTTTTATC	NA	False	NA	NA	False	NA	NA	NA	50099671	50099427	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50099400_50099700
H1_mix_00062678	chr3	-	1977	4	FSM	ENSG00000186792.17	ENST00000621157.5	1696	4	-28	-253	0	252	multi-exon	FALSE	canonical	3	6	junction_3	12.657891697365	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCGTGGACTACCATTCCC	10	True	NA	NA	False	NA	NA	NA	50298859	50292578	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50293516_50293631_50293722_50294708_50295620_50298820
H1_mix_00062679	chr3	-	2172	4	FSM	ENSG00000186792.17	ENST00000336307.6	1878	4	5	-299	1	298	multi-exon	FALSE	canonical	3	19	junction_3	7.87400787401181	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCGCCTGCGCGCTCAGGC	12	True	NA	NA	False	NA	NA	NA	50299400	50292532	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50293516_50293631_50293722_50294708_50295620_50299212
H1_mix_00062681	chr3	-	1464	2	FSM	ENSG00000243477.6	ENST00000443094.3	1464	2	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTGACAGTTTATTTG	7	True	NA	-4	True	AATAAA	-15	NA	50299405	50296401	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50297673_50299212
H1_mix_00062682	chr3	-	1820	2	FSM	ENSG00000243477.6	ENST00000443842.1	1820	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCTGGCTCAGAGCCGTC	12	True	NA	-54	True	NA	NA	NA	50299400	50296451	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50298084_50299212
H1_mix_00062684	chr3	-	2031	4	FSM	ENSG00000114378.17	ENST00000395144.7	2031	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	2.62466929133727	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGCTGTTTACTGAGCGC	-1	True	NA	-3	True	AATAAA	-15	NA	50303574	50299892	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50300801_50300987_50301078_50302056_50302981_50303465
H1_mix_00062686	chr3	-	4048	3	FSM	ENSG00000068001.14	ENST00000447092.5	4054	3	0	6	0	-6	multi-exon	FALSE	canonical	3	555	junction_1	38.5	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTACCTGGGCTAAAGT	9318	False	NA	-13	True	ATTAAA	-28	NA	50322782	50317795	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50318540_50318955_50319046_50319568
H1_mix_00062689	chr3	-	1669	3	FSM	ENSG00000114383.10	ENST00000232496.5	1669	3	0	0	0	0	multi-exon	FALSE	canonical	3	736	junction_1	12	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGAGTGGCATCCTGTG	-13	True	NA	-4	True	AATAAA	-20	NA	50328223	50324908	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50326187_50326356_50326478_50327953
H1_mix_00062690	chr3	-	735	4	FSM	ENSG00000114383.10	ENST00000454201.5	735	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	326.221124733243	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTGGCCCATAACCTTC	4	True	NA	-47	True	AATAAA	-2	NA	50328206	50326007	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50326187_50326356_50326478_50327037_50327220_50327953
H1_mix_00062691	chr3	-	790	4	FSM	ENSG00000114383.10	ENST00000421918.1	790	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	326.411805342066	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTGGCCCATAACCTTC	9993	False	NA	-47	True	AATAAA	-2	NA	50328251	50326007	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50326187_50326356_50326478_50327027_50327220_50327953
H1_mix_00062692	chr3	-	475	3	FSM	ENSG00000114383.10	ENST00000463304.1	475	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	380	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCCGGCAAGAAACTCCCA	-28	True	NA	-129	True	NA	NA	NA	50328238	50326089	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50326187_50326384_50326478_50327953
H1_mix_00062694	chr3	-	1753	5	FSM	ENSG00000068028.18	ENST00000327761.7	1757	5	0	4	0	0	multi-exon	FALSE	canonical	3	84	junction_2	12.4774797134678	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTTGGAATCTTTTAT	8280	False	NA	-10	True	AATAAA	-16	NA	50337464	50329785	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50330728_50331333_50331450_50331558_50331857_50332049_50332155_50337172
H1_mix_00062695	chr3	-	1849	6	FSM	ENSG00000068028.18	ENST00000359365.9	1847	6	0	-2	0	0	multi-exon	FALSE	canonical	1	1	junction_5	48.9219787007844	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTTGGAATCTTTTAT	-7	True	NA	-10	True	AATAAA	-16	NA	50340836	50329785	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50330728_50331333_50331450_50331558_50331857_50332049_50332155_50337904_50338012_50340555
H1_mix_00062696	chr3	-	1947	2	FSM	ENSG00000068028.18	ENST00000478619.1	2060	2	113	0	-26	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACCAGGCCTAGGCACC	9895	False	NA	NA	False	NA	NA	NA	50340867	50336376	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50338012_50340555
H1_mix_00062697	chr3	-	340	3	FSM	ENSG00000004838.14	ENST00000478269.5	633	3	293	0	293	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTGAAGGCCCTCTCAG	7395	False	NA	NA	False	NA	NA	NA	50343743	50343168	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50343445_50343562_50343617_50343733
H1_mix_00062698	chr3	-	1520	11	FSM	ENSG00000114388.14	ENST00000232501.8	1542	11	0	22	0	-22	multi-exon	FALSE	canonical	3	152	junction_9	23.2036635038521	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-13	True	NA	NA	False	AATAAA	-22	NA	50350775	50347351	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50347674_50347758_50347902_50348123_50348242_50348316_50348411_50348526_50348564_50348684_50348783_50348873_50349011_50349385_50349495_50349664_50349834_50349930_50350023_50350574
H1_mix_00062700	chr3	-	1865	10	ISM	ENSG00000114388.14	ENST00000232501.8	1542	11	71	158	0	0	intron_retention	FALSE	canonical	3	152	junction_9	23.9371605317128	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTATTGAGTGCTGTTTCT	8852	False	NA	-4	True	AATAAA	-20	NA	50350704	50347487	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_50347674_50347758_50347902_50348123_50348242_50348316_50348411_50348526_50348564_50348684_50348783_50348873_50349011_50349385_50349495_50349664_50349834_50349930
H1_mix_00062702	chr3	-	1367	11	NIC	ENSG00000114388.14	novel	1542	11	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_9	54.5711462221566	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTATTGAGTGCTGTTTCT	-1	True	NA	-4	True	AATAAA	-20	NA	50350763	50347487	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_50347674_50347758_50347902_50348123_50348242_50348316_50348411_50348526_50348564_50348684_50348783_50348873_50349011_50349385_50349495_50349664_50349829_50349930_50350023_50350574
H1_mix_00062707	chr3	-	5696	38	FSM	ENSG00000007402.12	ENST00000424201.7	5696	38	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_9	8.22341434334798	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGTCTCATAACATCTCA	-1	True	NA	NA	False	NA	NA	NA	50503634	50362612	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50364807_50364887_50364971_50365074_50365185_50365355_50365483_50365632_50365689_50365809_50365863_50366010_50366164_50366266_50366339_50366577_50366626_50366830_50366920_50367010_50367110_50367393_50367498_50367641_50367705_50367811_50367903_50368137_50368236_50370319_50370381_50374736_50374814_50375643_50375706_50375808_50375881_50375962_50376035_50376113_50376189_50377466_50377542_50377731_50377804_50378007_50378098_50378283_50378334_50378914_50378994_50379091_50379200_50379431_50379591_50379724_50379825_50379967_50380019_50380747_50380806_50380994_50381127_50384195_50384338_50387567_50387613_50394108_50394169_50434312_50434430_50476117_50476200_50503217
H1_mix_00062708	chr3	-	5304	38	FSM	ENSG00000007402.12	ENST00000429770.5	5304	38	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_9	9.07585113234451	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGTTCCCATCCACTGT	13	True	NA	-3	True	ATTAAA	-22	NA	50503428	50362801	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50364807_50364887_50364971_50365074_50365185_50365355_50365483_50365632_50365689_50365809_50365863_50366010_50366164_50366266_50366339_50366577_50366629_50366830_50366920_50367010_50367110_50367393_50367498_50367641_50367705_50367811_50367903_50368137_50368236_50370319_50370381_50374736_50374814_50375643_50375706_50375808_50375881_50375962_50376035_50376113_50376189_50377466_50377542_50377731_50377804_50378007_50378098_50378283_50378334_50378914_50378994_50379091_50379200_50379431_50379591_50379724_50379825_50379967_50380019_50380747_50380806_50380994_50381127_50384195_50384338_50387567_50387613_50394108_50394169_50434312_50434430_50476117_50476200_50503217
H1_mix_00062709	chr3	-	1714	4	FSM	ENSG00000007402.12	ENST00000487413.1	1030	4	206	-890	0	890	multi-exon	FALSE	canonical	2	4	junction_1	19.6015872373189	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGATCACTGTGCGCC	13	True	NA	-7	True	AATAAA	-18	NA	50503428	50414912	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50416217_50434312_50434430_50476117_50476200_50503217
H1_mix_00062710	chr3	-	2602	5	FSM	ENSG00000088543.15	ENST00000426034.5	2486	5	-116	0	-34	0	multi-exon	FALSE	canonical	3	18	junction_4	19.1180542943052	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGTGAGCCTGTGACG	3218	False	NA	-2	True	ATTAAA	-26	NA	50567781	50558024	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50559738_50560916_50561065_50561721_50561748_50565465_50565862_50567462
H1_mix_00062711	chr3	-	2778	6	FSM	ENSG00000088543.15	ENST00000357203.8	2657	6	-125	4	-125	3	multi-exon	FALSE	canonical	3	8	junction_4	21.811923344813	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGAGTGTGTGAGCCTGT	3127	False	NA	-6	True	ATTAAA	-22	NA	50567872	50558028	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50559738_50560916_50561065_50561721_50561748_50565465_50565862_50566005_50566095_50567462
H1_mix_00062712	chr3	-	2084	3	FSM	ENSG00000114737.16	ENST00000348721.4	2019	3	-31	-34	-31	34	multi-exon	FALSE	canonical	3	6	junction_1	1.5	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGTGTGTCCCCTTTGA	5071	False	NA	0	True	NA	NA	NA	50611805	50606454	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50608143_50608372_50608594_50611630
H1_mix_00062713	chr3	-	5946	25	FSM	ENSG00000145041.16	ENST00000423656.5	5946	25	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	58.5889488773741	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTGCTGTTTTGTTA	-8	True	NA	0	True	AATAAA	-20	NA	51499994	51395866	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_51397125_51398734_51398828_51403142_51403396_51412378_51412481_51412992_51413067_51413281_51413387_51413949_51414044_51414623_51414858_51416786_51416872_51418115_51418199_51418677_51418877_51419733_51420998_51422306_51422432_51427371_51427542_51429260_51429471_51430032_51430213_51433105_51433265_51440969_51441072_51441384_51441898_51443765_51443904_51463113_51463228_51466802_51466877_51470928_51471006_51483718_51483837_51499872
H1_mix_00062714	chr3	-	5649	25	FSM	ENSG00000145041.16	ENST00000684031.1	5649	25	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_23	55.5858788772432	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCCTTTCCCTATTTTC	-29	True	NA	-14	True	AATAAA	-20	NA	51500015	51397841	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_51398828_51403142_51403396_51412378_51412481_51412992_51413067_51413281_51413387_51413949_51414044_51414623_51414858_51416786_51416872_51418115_51418199_51418677_51418877_51419733_51420998_51422306_51422432_51427371_51427542_51429260_51429471_51430032_51430213_51433105_51433265_51440969_51441072_51441384_51441898_51443765_51443904_51463113_51463228_51466802_51466877_51470928_51471006_51483718_51483837_51496733_51496781_51499872
H1_mix_00062715	chr3	-	1546	15	FSM	ENSG00000114767.7	ENST00000232888.7	1542	15	0	-4	0	4	multi-exon	FALSE	canonical	3	393	junction_9	31.2716863527847	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGTAGCTTCTTGGTG	-8	True	NA	-3	True	ATTAAA	-22	NA	51941904	51933424	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_51933600_51933707_51933782_51934471_51934552_51934630_51934777_51935196_51935260_51935341_51935477_51935591_51935693_51936256_51936350_51936430_51936556_51937191_51937319_51937544_51937587_51937668_51937737_51938094_51938205_51941408_51941492_51941780
H1_mix_00062716	chr3	-	1966	13	FSM	ENSG00000090097.22	ENST00000322099.11	1964	13	0	-2	0	0	multi-exon	FALSE	canonical	3	24	junction_12	50.0734876623016	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGAAATACTGGTGTTG	6507	False	NA	-10	True	AATAAA	-20	NA	51962892	51957453	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_51958350_51958789_51958960_51959046_51959100_51959228_51959293_51959366_51959412_51959576_51959652_51959894_51960024_51960188_51960321_51960525_51960643_51960865_51960899_51961009_51961034_51961159_51961305_51962809
H1_mix_00062717	chr3	-	2160	14	FSM	ENSG00000090097.22	ENST00000461554.6	2156	14	0	-4	0	0	multi-exon	FALSE	canonical	3	23	junction_13	58.8152256582491	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGAAATACTGGTGTTG	-7	True	NA	-10	True	AATAAA	-20	NA	51967454	51957453	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_51958350_51958789_51958960_51959046_51959100_51959228_51959293_51959366_51959412_51959576_51959652_51959894_51960024_51960188_51960321_51960525_51960643_51960865_51960899_51961009_51961034_51961159_51961305_51961940_51962089_51967325
H1_mix_00062719	chr3	-	2119	15	NIC	ENSG00000090097.22	novel	2009	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_12	68.7016991739488	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGAAATACTGGTGTTG	7452	False	NA	-10	True	AATAAA	-20	NA	51968387	51957453	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_51958350_51958789_51958960_51959046_51959100_51959228_51959293_51959366_51959412_51959576_51959652_51959894_51960024_51960188_51960321_51960525_51960643_51960865_51960899_51961009_51961034_51961159_51961305_51962809_51962893_51967325_51967435_51968343
H1_mix_00062721	chr3	-	1784	13	FSM	ENSG00000090097.22	ENST00000471622.5	1784	13	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	62.3484830074745	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATCCCTGTTTTTGAATA	7320	False	NA	-51	True	NA	NA	NA	51962079	51957494	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_51958153_51958789_51958960_51959046_51959100_51959228_51959293_51959366_51959412_51959576_51959652_51959894_51960024_51960188_51960321_51960525_51960643_51960865_51960899_51961009_51961034_51961159_51961305_51961940
H1_mix_00062727	chr3	-	1657	4	FSM	ENSG00000114779.20	ENST00000361143.10	1657	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	5.8878405775519	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCACCGGCTCCTGCTTCT	-22	True	NA	-12	True	AATAAA	-15	NA	51974049	51968514	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_51969606_51969942_51970185_51971459_51971699_51973964
H1_mix_00062729	chr3	-	742	4	FSM	ENSG00000162244.12	ENST00000466397.5	742	4	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_3	3631.51963906143	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTAGCCTCTGTCTATG	547	False	NA	-33	True	AATAAA	-13	NA	51995863	51993627	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_51994127_51995041_51995107_51995424_51995470_51995730
H1_mix_00062730	chr3	-	880	3	FSM	ENSG00000162244.12	ENST00000481629.1	880	3	0	0	0	0	multi-exon	FALSE	canonical	3	4324	junction_2	1693.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGTGGTGGTACACTTT	1	True	NA	NA	False	NA	NA	NA	51995881	51994296	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_51995107_51995424_51995470_51995856
H1_mix_00062731	chr3	-	3361	3	FSM	ENSG00000164086.10	ENST00000495880.2	3361	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	1	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTCGTGTCCGATAAGGG	-6	True	NA	-2	True	AATAAA	-20	NA	52056571	52048918	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52051123_52053939_52054375_52055849
H1_mix_00062733	chr3	-	1791	10	NIC	ENSG00000164087.8	novel	1936	11	NA	NA	4	-23	combination_of_known_splicesites	FALSE	canonical	2	17	junction_2	72.3777811892334	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAGGAGTGGCTTATGCT	7	True	NA	-15	True	ATTAAA	-20	NA	52154400	52075248	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_52075986_52096568_52096713_52125112_52125182_52138168_52138303_52145845_52145962_52146987_52147096_52149209_52149390_52149815_52149988_52151015_52151101_52154354
H1_mix_00062734	chr3	-	2054	10	FSM	ENSG00000164087.8	ENST00000394970.6	1999	10	-55	0	-55	0	multi-exon	FALSE	canonical	3	94	junction_1	49.7946400011036	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAATCTCAAAATTAAACC	NA	False	NA	-52	True	NA	NA	NA	52154745	52075285	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52075986_52122378_52122478_52125112_52125182_52138168_52138303_52145845_52145962_52146987_52147096_52149209_52149390_52149815_52149988_52151015_52151101_52154354
H1_mix_00062736	chr3	-	1614	9	FSM	ENSG00000247596.10	ENST00000305533.10	1614	9	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_7	33.472936829624	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTGCTTGGCCCTGAG	-35	True	NA	-20	True	AATAAA	-16	NA	52239158	52228611	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52229202_52229660_52229783_52229919_52230071_52230869_52230996_52231126_52231232_52231443_52231540_52231943_52232123_52235028_52235107_52238991
H1_mix_00062738	chr3	-	2141	6	FSM	ENSG00000247596.10	ENST00000676552.1	2139	6	0	-2	0	0	multi-exon	FALSE	canonical	3	503	junction_1	29.982661656364	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAATATTTTTAAATCA	6612	False	NA	-41	True	NA	NA	NA	52232511	52228632	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52229202_52229660_52229783_52229919_52230071_52230869_52230996_52231126_52231232_52231443
H1_mix_00062739	chr3	-	2380	8	FSM	ENSG00000247596.10	ENST00000676800.1	2366	8	0	-14	0	0	multi-exon	FALSE	canonical	3	485	junction_6	35.3813048755113	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAATATTTTTAAATCA	-23	True	NA	-41	True	NA	NA	NA	52239146	52228632	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52229202_52229660_52229783_52229919_52230996_52231126_52231232_52231443_52231540_52231943_52232123_52235028_52235107_52238991
H1_mix_00062740	chr3	-	1579	9	FSM	ENSG00000247596.10	ENST00000676989.1	1579	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_7	175.608762594581	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAATATTTTTAAATCA	-26	True	NA	-41	True	NA	NA	NA	52239149	52228632	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52229202_52229660_52229783_52229919_52230071_52230869_52230996_52231126_52231232_52231443_52231540_52231943_52232118_52235028_52235107_52238991
H1_mix_00062742	chr3	-	1997	8	FSM	ENSG00000247596.10	ENST00000678330.1	1997	8	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_6	33.4822523807732	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCAGGGCTGGGGCAGGG	-42	False	NA	-103	True	NA	NA	NA	52239165	52228694	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52229783_52229919_52230071_52230869_52230996_52231126_52231232_52231443_52231540_52231943_52232123_52235028_52235107_52238991
H1_mix_00062743	chr3	-	4309	9	FSM	ENSG00000164091.12	ENST00000296490.8	4286	9	0	-23	0	23	multi-exon	FALSE	canonical	3	103	junction_8	5.3619026473818	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTTTCTGTAGCATGG	-11	True	NA	1	True	NA	NA	NA	52278649	52254410	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52257520_52258535_52258679_52259196_52259267_52259716_52259873_52260384_52260502_52261379_52261480_52266951_52267019_52270711_52270810_52278200
H1_mix_00062745	chr3	-	3600	17	FSM	ENSG00000163930.10	ENST00000460680.6	3600	17	0	0	0	0	multi-exon	TRUE	canonical	3	201	junction_9	50.3636773875776	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAACCCTCCTGTGGTTGCT	-3	True	NA	17	True	AATAAA	-26	NA	52410008	52401007	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52402422_52402601_52402675_52402778_52402872_52403137_52403299_52403415_52403895_52404452_52404587_52405109_52405295_52405764_52405913_52406252_52406377_52406828_52406908_52407173_52407317_52407398_52407461_52407957_52408078_52408473_52408607_52409553_52409609_52409713_52409744_52409841
H1_mix_00062746	chr3	-	3434	17	FSM	ENSG00000163930.10	ENST00000296288.9	3434	17	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_9	81.7602248957279	1092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAATCTCCTGAGAAATG	618	False	NA	-1	True	AATAAA	-8	NA	52409914	52401025	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52402422_52402601_52402675_52402778_52402872_52403137_52403299_52403415_52403895_52404452_52404587_52405109_52405295_52405764_52405913_52406252_52406323_52406828_52406908_52407173_52407317_52407398_52407461_52407957_52408078_52408473_52408607_52409553_52409609_52409713_52409744_52409841
H1_mix_00062747	chr3	-	3872	5	FSM	ENSG00000163930.10	ENST00000478368.1	1234	5	-1848	-790	158	0	multi-exon	FALSE	canonical	2	10	junction_3	160.916904021921	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAATCTCCTGAGAAATG	5037	False	NA	-1	True	AATAAA	-8	NA	52405495	52401025	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52402422_52402601_52402675_52402778_52402941_52403137_52403299_52403415
H1_mix_00062748	chr3	-	1127	4	FSM	ENSG00000163930.10	ENST00000466093.1	1127	4	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_2	7.31816613336672	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCAGGACCTGGCCCTTC	6981	False	NA	-57	True	NA	NA	NA	52403551	52402023	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52402422_52402601_52402675_52402778_52403299_52403415
H1_mix_00062749	chr3	-	793	3	FSM	ENSG00000163930.10	ENST00000490804.1	870	3	77	0	77	0	multi-exon	FALSE	canonical	3	315	junction_1	14.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGCAGCCCTCACCCACCC	4956	False	NA	NA	False	GGGGCT	-30	NA	52405576	52403702	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52403895_52404452_52404587_52405109
H1_mix_00062750	chr3	-	696	6	FSM	ENSG00000114854.8	ENST00000232975.8	687	6	0	-9	0	9	multi-exon	FALSE	canonical	3	96	junction_3	6.70522184569608	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCTCTGGTGTCCCTGG	-1	True	NA	0	True	AATAAA	-24	NA	52454041	52451090	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52451307_52451390_52451528_52451743_52451859_52452105_52452253_52452482_52452514_52453991
H1_mix_00062752	chr3	-	688	6	FSM	ENSG00000168268.11	ENST00000463947.5	670	6	0	-18	0	18	multi-exon	FALSE	canonical	3	118	junction_1	816.035685494207	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCTCGTCACTTGACT	7366	False	NA	-3	True	AATAAA	-37	NA	52527684	52524366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52524612_52524816_52524882_52524962_52525104_52525208_52525296_52527293_52527376_52527616
H1_mix_00062753	chr3	-	1897	14	FSM	ENSG00000168268.11	ENST00000422318.7	1877	14	0	-20	0	18	multi-exon	FALSE	canonical	3	1886	junction_13	157.696660352686	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCTCGTCACTTGACT	-22	True	NA	-3	True	AATAAA	-37	NA	52533857	52524366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52524732_52524816_52524882_52524962_52525104_52525208_52525296_52527293_52527376_52527616_52527719_52527828_52527932_52528012_52528074_52528182_52528312_52528445_52528540_52528636_52528693_52528860_52528936_52529149_52529335_52533505
H1_mix_00062754	chr3	-	2067	14	FSM	ENSG00000168268.11	ENST00000307076.8	2047	14	0	-20	0	18	multi-exon	FALSE	canonical	2	3	junction_13	586.722135175865	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCTCGTCACTTGACT	-4	True	NA	-3	True	AATAAA	-37	NA	52535054	52524366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52524732_52524816_52524882_52524962_52525104_52525208_52525296_52527293_52527376_52527616_52527719_52527828_52527932_52528012_52528074_52528182_52528312_52528445_52528540_52528636_52528693_52528860_52528936_52529149_52529335_52534532
H1_mix_00062757	chr3	-	887	5	FSM	ENSG00000168268.11	ENST00000466112.5	887	5	0	0	0	0	multi-exon	FALSE	canonical	3	1966	junction_1	96.8410424355294	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCCTGCTCAACTACCGC	7282	False	NA	NA	False	NA	NA	NA	52527768	52524612	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52524732_52524816_52524882_52524962_52525104_52525208_52525296_52527293
H1_mix_00062760	chr3	-	7618	29	FSM	ENSG00000163939.18	ENST00000409057.5	4980	29	1	-2639	0	0	multi-exon	FALSE	canonical	3	113	junction_4	46.4115765599006	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTGTTCTGTTAAAGT	6224	False	NA	0	True	AATAAA	-35	NA	52679713	52545351	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52548236_52550420_52550638_52550746_52550818_52554723_52554880_52561766_52561969_52563282_52563494_52564049_52564234_52576540_52576699_52579053_52579200_52586424_52586689_52587352_52587511_52589069_52589256_52603520_52603733_52609312_52609956_52615350_52615457_52617261_52617539_52627272_52627371_52628893_52629036_52634601_52634816_52641953_52642046_52643247_52643344_52644703_52644790_52648343_52648443_52651741_52651811_52658198_52658316_52662132_52662277_52668497_52668646_52678499_52678598_52679573
H1_mix_00062762	chr3	-	7644	29	NIC	ENSG00000163939.18	novel	4980	29	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	112	junction_3	45.7378705901625	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTGTTCTGTTAAAGT	20	True	NA	0	True	AATAAA	-35	NA	52685917	52545351	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_52548236_52550420_52550638_52550746_52550818_52561766_52561969_52563282_52563494_52564049_52564234_52576540_52576699_52579053_52579200_52586424_52586689_52587352_52587511_52589069_52589256_52603520_52603733_52609312_52609956_52615350_52615457_52617261_52617539_52627272_52627371_52628893_52629036_52634601_52634816_52641953_52642046_52643247_52643344_52644703_52644790_52648343_52648443_52651741_52651811_52658198_52658316_52662132_52662277_52668497_52668646_52678499_52678598_52679573_52679727_52685748
H1_mix_00062763	chr3	-	7778	30	NIC	ENSG00000163939.18	novel	5145	30	NA	NA	-9	4	combination_of_known_junctions	FALSE	canonical	3	113	junction_4	47.4069838370671	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTCTGTTAAAGTGGTG	-9	True	NA	4	True	AATAAA	-39	NA	52685891	52545347	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_52548236_52550420_52550638_52550746_52550818_52554723_52554880_52561766_52561969_52563282_52563494_52564049_52564234_52576540_52576699_52579053_52579200_52586424_52586689_52587352_52587511_52589069_52589256_52603520_52603733_52609312_52609956_52615350_52615457_52617261_52617539_52627272_52627371_52628893_52629036_52634601_52634816_52641953_52642046_52643247_52643344_52644703_52644790_52648343_52648443_52651741_52651811_52658198_52658316_52662132_52662277_52668497_52668646_52678499_52678598_52679573_52679727_52685748
H1_mix_00062764	chr3	-	7901	31	NIC	ENSG00000163939.18	novel	5145	30	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	3	53	junction_30	65.5456075314484	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGTTTGGTTGTTCTGTT	1	True	NA	-5	True	AATAAA	-30	NA	52685881	52545356	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_52548236_52550420_52550638_52550746_52550818_52554723_52554880_52561766_52561969_52563282_52563494_52564049_52564234_52576540_52576699_52579053_52579200_52586424_52586689_52587352_52587511_52589069_52589256_52603520_52603733_52609312_52609956_52615350_52615457_52617261_52617539_52627272_52627371_52628893_52629036_52634601_52634816_52641953_52642046_52643247_52643344_52644703_52644790_52648343_52648443_52651741_52651811_52658198_52658316_52662132_52662277_52668497_52668646_52678499_52678598_52679573_52679727_52682091_52682234_52685748
H1_mix_00062765	chr3	-	7960	31	NIC	ENSG00000163939.18	novel	5145	30	NA	NA	1	-15	combination_of_known_junctions	FALSE	canonical	2	4	junction_21	83.9748904269736	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGATTAACCAGGTTTGG	1	True	NA	-15	True	AATAAA	-20	NA	52685881	52545366	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_52548236_52550420_52550638_52550746_52550818_52554723_52554880_52558248_52558414_52561766_52561969_52563282_52563494_52564049_52564234_52576540_52576699_52579053_52579200_52586424_52586689_52587352_52587511_52589069_52589256_52603520_52603733_52609312_52609956_52615350_52615457_52617261_52617539_52627272_52627371_52628893_52629036_52634601_52634816_52641953_52642046_52644703_52644790_52648343_52648443_52651741_52651811_52658198_52658316_52662132_52662277_52668497_52668646_52678499_52678598_52679573_52679727_52682091_52682234_52685748
H1_mix_00062766	chr3	-	7787	30	FSM	ENSG00000163939.18	ENST00000296302.11	5145	30	0	-2642	0	4	multi-exon	FALSE	canonical	3	66	junction_5	58.0421553311175	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTCTGTTAAAGTGGTG	6224	False	NA	4	True	AATAAA	-39	NA	52679713	52545347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52548236_52550420_52550638_52550746_52550818_52554723_52554880_52558248_52558414_52561766_52561969_52563282_52563494_52564049_52564234_52576540_52576699_52579053_52579200_52586424_52586689_52587352_52587511_52589069_52589256_52603520_52603733_52609312_52609956_52615350_52615457_52617261_52617539_52627272_52627371_52628893_52629036_52634601_52634816_52641953_52642046_52643247_52643344_52644703_52644790_52648343_52648443_52651741_52651811_52658198_52658316_52662132_52662277_52668497_52668646_52678499_52678598_52679573
H1_mix_00062774	chr3	-	1594	10	FSM	ENSG00000016864.19	ENST00000491606.5	1577	10	0	-17	0	0	multi-exon	FALSE	canonical	0	0	junction_9	78.701969479804	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTCTTTTTTTATTCCA	-5	True	NA	-2	True	AATAAA	-20	NA	52705781	52694485	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52695036_52695189_52695303_52695420_52695588_52695927_52696041_52696233_52696319_52696541_52696660_52697720_52697935_52700261_52700361_52700444_52700497_52705698
H1_mix_00062775	chr3	-	1856	10	FSM	ENSG00000016864.19	ENST00000266014.11	1856	10	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_9	44.0204778385674	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTCTTTTTTTATTCCA	-15	True	NA	-2	True	AATAAA	-20	NA	52705791	52694485	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52695036_52695189_52695303_52695420_52695588_52695927_52696041_52696233_52696319_52696541_52696660_52697720_52697935_52700261_52700361_52700444_52700497_52705446
H1_mix_00062779	chr3	-	3550	15	NIC	ENSG00000114904.13	novel	6053	16	NA	NA	24	993	combination_of_known_junctions	TRUE	canonical	3	90	junction_8	32.1821981466621	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCAGGTGTTTTTTTT	16	True	NA	-5	True	AATAAA	-15	NA	52770915	52710783	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_52711870_52737585_52737720_52739428_52739635_52741410_52741500_52743351_52743462_52744238_52744306_52746060_52746211_52746733_52746905_52751931_52752337_52760794_52760937_52763469_52763625_52765886_52765995_52766177_52766376_52768337_52768605_52770653
H1_mix_00062780	chr3	-	2922	16	NIC	ENSG00000114904.13	novel	6053	16	NA	NA	13	254	combination_of_known_junctions	FALSE	canonical	1	4	junction_15	49.1621353844151	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGAGCCTTAATCCACCA	5	True	NA	27	True	NA	NA	NA	52770926	52711522	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_52711870_52737585_52737720_52739428_52739635_52741410_52741500_52743351_52743462_52744238_52744306_52746060_52746211_52746733_52746905_52749691_52749830_52751931_52752337_52760794_52760937_52763469_52763625_52765886_52765995_52766177_52766376_52768337_52768567_52770653
H1_mix_00062781	chr3	-	2575	14	FSM	ENSG00000114904.13	ENST00000383721.8	2576	14	0	1	0	-1	multi-exon	FALSE	canonical	3	90	junction_7	33.0427372535494	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCATCTAAAGTGTATAAT	-8	True	NA	NA	False	TATAAA	-17	NA	52770939	52737498	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52737720_52739428_52739635_52741410_52741500_52743351_52743462_52744238_52744306_52746060_52746211_52746733_52746905_52751931_52752337_52760794_52760937_52763469_52763625_52765886_52765995_52766177_52766376_52768337_52768605_52770653
H1_mix_00062785	chr3	-	523	3	FSM	ENSG00000272573.6	ENST00000446157.3	523	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	7	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAAGGTGTTGGTTGGTC	-1	True	NA	-10	True	AATAAA	-26	NA	52835019	52833120	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52833431_52833616_52833750_52834939
H1_mix_00062786	chr3	-	755	5	FSM	ENSG00000248592.7	ENST00000514466.5	755	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	61.0343141191904	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAAGGTGTTGGTTGGTC	220	False	NA	-10	True	AATAAA	-26	NA	52842947	52833120	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52833431_52833616_52833750_52834939_52835004_52840499_52840611_52842810
H1_mix_00062788	chr3	-	7005	10	NIC	ENSG00000248592.7	novel	1405	10	NA	NA	-40	0	intron_retention	FALSE	canonical	3	29	junction_2	64.8418779478392	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGAGGATGCCCACGTGG	-28	True	NA	-39	True	NA	NA	NA	52897602	52833149	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_52833431_52833616_52833750_52834939_52840611_52842810_52842961_52843720_52843799_52844828_52844942_52849791_52849914_52852602_52852699_52855395_52855445_52897290
H1_mix_00062790	chr3	-	816	5	NIC	ENSG00000213533.13	novel	458	4	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	88.0085223146031	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCTGAGGTTGTTCATT	31	True	NA	-1	True	ATTAAA	-18	NA	52897543	52847255	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_52847552_52849791_52849914_52852602_52852699_52855395_52855445_52897290
H1_mix_00062791	chr3	-	8991	21	FSM	ENSG00000163935.14_ENSG00000289519.1	ENST00000394752.8	4553	21	21	-4459	0	91	multi-exon	TRUE	canonical	3	30	junction_20	17.7242066112986	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCTGTGGGAGAGAGACA	7	True	NA	91	True	AATAAA	-30	NA	53046052	52899112	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52905277_52906112_52906242_52907068_52907315_52907554_52907734_52911002_52911179_52912537_52912648_52913477_52913618_52916149_52916215_52918483_52918527_52920536_52920651_52921704_52921832_52926030_52926114_52928190_52928342_52930328_52930431_52930940_52931036_52932061_52932309_52934812_52934902_52943352_52943594_52954316_52954412_52969100_52969259_53045815
H1_mix_00062792	chr3	-	908	4	FSM	ENSG00000163935.14	ENST00000483069.5	617	4	-210	-81	-123	0	multi-exon	FALSE	canonical	3	14	junction_3	28.7788502588658	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATGAAATACTTCCTATC	NA	False	NA	NA	False	NA	NA	NA	53046873	52943352	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52943594_52954316_52954412_52969100_52969259_53046459
H1_mix_00062793	chr3	-	393	4	FSM	ENSG00000163935.14	ENST00000470575.5	698	4	303	2	303	-2	multi-exon	FALSE	canonical	0	0	junction_2	28.7556757682529	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGCAATAACTATATTTG	1705	False	NA	NA	False	AAGAAA	-39	NA	53044966	52954316	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52954412_52969100_52969259_53043135_53043255_53044945
H1_mix_00062794	chr3	-	5081	13	FSM	ENSG00000163933.10	ENST00000296292.8	5081	13	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_3	47.6674679419832	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTTTCTTCTTTCATACC	4	True	NA	0	True	AATAAA	-25	NA	53130435	53088482	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_53092071_53092368_53092619_53099380_53099487_53103952_53104098_53105672_53105804_53106818_53106870_53111829_53111909_53119883_53120022_53121698_53121801_53122373_53122564_53123723_53123841_53125908_53125995_53130337
H1_mix_00062797	chr3	-	3001	14	FSM	ENSG00000163931.17	ENST00000462138.6	2996	14	0	-5	0	5	multi-exon	FALSE	canonical	3	2955	junction_11	271.584371799846	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAATTGCCCCCCACTTAG	-4	True	NA	-3	True	AATAAA	-20	NA	53256022	53224706	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_53225932_53226755_53226879_53228055_53228150_53228275_53228360_53229006_53229138_53229279_53229437_53230456_53230622_53231356_53231551_53233155_53233275_53234982_53235175_53240250_53240349_53241131_53241246_53242124_53242243_53255835
H1_mix_00062798	chr3	-	2075	15	FSM	ENSG00000163931.17	ENST00000423516.5	2075	15	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_11	1167.75203546238	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGAATTGGCCCTGAA	-4	True	NA	-25	True	AATATA	-10	NA	53256022	53225656	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_53225932_53226755_53226879_53228055_53228150_53228275_53228360_53229006_53229138_53229279_53229437_53230456_53230622_53231356_53231551_53233155_53233275_53234982_53235175_53237796_53237821_53240250_53240349_53241131_53241246_53242124_53242243_53255835
H1_mix_00062801	chr3	-	1857	9	FSM	ENSG00000272886.6	ENST00000294241.10	1853	9	0	-4	0	0	multi-exon	TRUE	canonical	3	11	junction_4	55.17189048782	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6	True	NA	NA	False	NA	NA	NA	53347525	53287365	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_53287661_53288064_53288284_53290790_53290857_53292068_53292828_53312240_53312380_53319406_53319474_53342143_53342272_53344901_53344943_53347382
H1_mix_00062803	chr3	-	7695	9	FSM	ENSG00000016391.11	ENST00000315251.11	7694	9	0	-1	0	1	multi-exon	TRUE	canonical	3	42	junction_3	12.4342018240014	645	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTACTTCTGGATAGC	-9	True	NA	NA	False	AATAAA	-17	NA	53846419	53812333	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_53818196_53818937_53819041_53819531_53819675_53820473_53820609_53821646_53821777_53822490_53822643_53823305_53824068_53840928_53841000_53846082
H1_mix_00062805	chr3	-	3679	13	FSM	ENSG00000113812.14	ENST00000335754.8	3579	13	0	-100	0	100	multi-exon	FALSE	canonical	3	102	junction_4	15.5902391115581	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCATGAGGTGGCCCTTTA	-1	True	NA	82	True	CATAAA	-6	NA	53882152	53866965	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_53868863_53869981_53870146_53871231_53871497_53872383_53872525_53873031_53873128_53874210_53874365_53875947_53876081_53876619_53876714_53877213_53877388_53877646_53877752_53878356_53878468_53879938_53880110_53881978
H1_mix_00062806	chr3	-	1497	5	FSM	ENSG00000113811.12	ENST00000495461.6	1497	5	0	0	0	0	multi-exon	FALSE	canonical	3	1274	junction_4	35.5457451743524	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATAATTCCTCTTCTGGT	12	True	NA	-5	True	AATAAA	-22	NA	53891859	53884416	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_53885562_53885825_53885913_53886850_53886935_53888392_53888484_53891769
H1_mix_00062807	chr3	-	611	5	FSM	ENSG00000113811.12	ENST00000488746.1	611	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	556.006913176446	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAATAAGTAAATATTTT	6	True	NA	-35	True	ATTAAA	-13	NA	53891865	53885300	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_53885562_53885825_53885905_53886850_53886935_53888392_53888484_53891769
H1_mix_00062808	chr3	-	6277	4	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	0	3442	at_least_one_novel_splicesite	FALSE	canonical	3	6290	junction_1	1243.11982080928	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGAGTGGTTTTTATTTT	NA	False	NA	-5	True	ATTAAA	-19	NA	54639857	54628679	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_54632503_54633558_54633741_54634460_54634566_54637690
H1_mix_00062809	chr3	-	4411	5	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	0	3442	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	3905.68626332172	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGAGTGGTTTTTATTTT	NA	False	NA	-5	True	ATTAAA	-19	NA	54639857	54628679	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_54629473_54631643_54632808_54633558_54633741_54634460_54634566_54637690
H1_mix_00062813	chr3	-	2190	5	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	0	3440	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	3946.58162211299	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTAGAGTGGTTTTTATT	NA	False	NA	-7	True	ATTAAA	-17	NA	54639857	54628681	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_54629473_54631643_54632503_54633558_54633741_54634460_54634566_54639604
H1_mix_00062814	chr3	-	1150	5	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	3	469	junction_4	3397.41971023599	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTCTCTTCATATTTGT	NA	False	NA	-22	True	ATTAAA	-24	NA	54639827	54632121	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_54632503_54633558_54633741_54634460_54634566_54637690_54637950_54639604
H1_mix_00062815	chr3	-	3140	4	FSM	ENSG00000265992.1	ENST00000583516.1	3140	4	0	0	0	0	multi-exon	FALSE	canonical	3	2161	junction_1	3129.71067175368	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTCTCTTCATATTTGT	NA	False	NA	-22	True	ATTAAA	-24	NA	54639857	54632121	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_54632808_54633558_54633741_54634460_54634566_54637690
H1_mix_00062816	chr3	-	5841	5	FSM	ENSG00000114251.15	ENST00000264634.9	5841	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	3.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCAGTCGTGCGTGTGTGT	-2	True	NA	-1	True	ATTAAA	-19	NA	55487306	55465714	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_55470551_55474336_55474630_55479313_55479565_55480784_55480919_55486979
H1_mix_00062818	chr3	-	1323	3	NIC	ENSG00000187672.14	novel	658	2	NA	NA	-55	-10	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	5.5	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAACTTGGTGTTTTTGCC	31	False	NA	-12	True	AATAAA	-3	NA	56468522	56433798	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_56434050_56434350_56435148_56468247
H1_mix_00062820	chr3	-	5592	23	NIC	ENSG00000163946.14	novel	5600	24	NA	NA	-13	5	combination_of_known_splicesites	FALSE	canonical	2	4	junction_17	20.2039191026751	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGAATTATCTCATGTT	7	True	NA	-6	True	AATAAA	-23	NA	56683250	56622853	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_56623844_56624478_56624644_56624827_56625007_56627036_56627146_56627581_56627742_56628491_56628615_56633043_56633967_56638705_56638766_56639985_56640131_56641348_56641753_56646521_56647224_56648821_56648894_56648984_56649058_56660730_56660835_56660913_56661018_56662384_56662491_56663540_56663573_56668396_56668559_56669699_56669792_56670072_56670146_56671599_56671693_56673579_56673726_56682675
H1_mix_00062821	chr3	-	5609	24	NIC	ENSG00000163946.14	novel	5600	24	NA	NA	0	5	combination_of_known_junctions	FALSE	canonical	3	29	junction_7	14.875793254571	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGAATTATCTCATGTT	-8	True	NA	-6	True	AATAAA	-23	NA	56683265	56622853	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_56623844_56624478_56624644_56624827_56625007_56627036_56627146_56627581_56627742_56628491_56628615_56633043_56633844_56638705_56638766_56639985_56640131_56641348_56641753_56646521_56647224_56648821_56648894_56648984_56649058_56660730_56660835_56660913_56661018_56662384_56662491_56663540_56663573_56666259_56666385_56668396_56668559_56669699_56669792_56670072_56670146_56671599_56671693_56673579_56673726_56682675
H1_mix_00062822	chr3	-	6601	24	FSM	ENSG00000163946.14	ENST00000493960.6	5600	24	-1121	120	-873	1	multi-exon	FALSE	canonical	3	33	junction_7	14.3926835014979	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTACTTGAATTATCTCA	NA	False	NA	-10	True	AATAAA	-19	NA	56684138	56622857	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_56623844_56624478_56624644_56624827_56625007_56627036_56627146_56627581_56627742_56628491_56628615_56633043_56633967_56638705_56638766_56639985_56640131_56641348_56641753_56646521_56647224_56648821_56648894_56648984_56649058_56660730_56660835_56660913_56661018_56662384_56662491_56663540_56663573_56666259_56666385_56668396_56668559_56669699_56669792_56670072_56670146_56671599_56671693_56673579_56673726_56682675
H1_mix_00062823	chr3	-	3583	10	FSM	ENSG00000163947.12	ENST00000296315.8	3582	10	0	-1	0	-1	multi-exon	FALSE	canonical	2	7	junction_9	10.7059461959519	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCATGTGTACAGTGTTT	-1	True	NA	-2	True	AATAAA	-18	NA	56801949	56727418	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_56729623_56732237_56732425_56737184_56737356_56745204_56745463_56751055_56751133_56751299_56751397_56753503_56753567_56754980_56755152_56773708_56773817_56801702
H1_mix_00062824	chr3	-	3636	13	FSM	ENSG00000163947.12	ENST00000338458.8	3639	13	1	2	1	0	multi-exon	FALSE	canonical	2	12	junction_12	9.80929264637477	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCCATGTGTACAGTGTT	-3	True	NA	-3	True	AATAAA	-17	NA	57079307	56727419	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_56729623_56732237_56732425_56737184_56737356_56745204_56745463_56751055_56751133_56751299_56751397_56753503_56753567_56754980_56755152_56773708_56773817_56882291_56882355_56958822_56958890_57035087_57035177_57079225
H1_mix_00062828	chr3	-	1057	3	NIC	ENSG00000163666.10	novel	977	4	NA	NA	11	-4	intron_retention	FALSE	canonical	3	205	junction_1	5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGTGAGTTGTTTTCA	12	False	NA	NA	False	AGTAAA	-15	NA	57199967	57197841	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_57198493_57198752_57198953_57199761
H1_mix_00062829	chr3	-	1736	3	FSM	ENSG00000163666.10	ENST00000495160.2	657	3	-1079	0	6	0	multi-exon	FALSE	canonical	3	13	junction_2	101	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCGAAGACCAAGAACTGC	8	True	NA	NA	False	NA	NA	NA	57227600	57198788	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_57198953_57199761_57200029_57226295
H1_mix_00062830	chr3	-	1596	6	FSM	ENSG00000168374.11	ENST00000303436.11	1596	6	0	0	0	0	multi-exon	TRUE	canonical	3	1658	junction_2	108.899954086308	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTGTTCTTTTTGAG	0	True	NA	NA	False	AATAAA	-17	NA	57597344	57571362	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_57572299_57575547_57575674_57577315_57577388_57583897_57584008_57584383_57584465_57597073
H1_mix_00062831	chr3	-	1614	6	FSM	ENSG00000168374.11	ENST00000486310.5	1601	6	0	-13	0	0	multi-exon	FALSE	canonical	3	33	junction_4	737.575216503375	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTCCTAATAAAATGATAA	10	True	NA	NA	False	AATACA	-25	NA	57597366	57571391	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_57572299_57575547_57575674_57577315_57577388_57583897_57584033_57584383_57584465_57597073
H1_mix_00062832	chr3	-	4646	20	FSM	ENSG00000174839.13	ENST00000311128.10	4646	20	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_2	19.3614117751774	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGATATTTTGTGTTATT	1	True	NA	-5	True	ATTAAA	-20	NA	57693077	57625453	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_57628346_57628810_57628886_57630420_57630524_57630714_57630825_57630924_57630979_57633264_57633355_57634557_57634623_57634703_57634770_57641652_57641748_57645660_57645757_57646315_57646439_57657679_57657736_57659117_57659181_57660759_57660840_57661445_57661552_57663635_57663717_57666122_57666236_57672255_57672299_57672399_57672439_57692781
H1_mix_00062833	chr3	-	503	6	FSM	ENSG00000174839.13	ENST00000477344.1	503	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	24.2783854487896	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGACTTTTATTGATTT	NA	False	NA	NA	False	NA	NA	NA	57660826	57634703	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_57634770_57641652_57641748_57645660_57645757_57646315_57646439_57657679_57657736_57660759
H1_mix_00062838	chr3	-	1546	9	FSM	ENSG00000168291.13	ENST00000461692.5	1535	9	0	-11	0	0	multi-exon	FALSE	canonical	3	2576	junction_3	120.525930819886	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTACTGTTAGTTTGTT	-6	True	NA	-23	True	ATTAAA	-12	NA	58433839	58427680	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_58428180_58428472_58428615_58429707_58429800_58430127_58430239_58430656_58430943_58431592_58431629_58431730_58431794_58431876_58431985_58433630
H1_mix_00062839	chr3	-	1072	6	FSM	ENSG00000168306.13	ENST00000467738.1	1072	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	2.28035085019828	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATGTTTTAGAGTCAT	49	False	NA	-2	True	ATTAAA	-14	NA	58526749	58505135	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_58505287_58508892_58509026_58517205_58517424_58522495_58522602_58524425_58524606_58526465
H1_mix_00062842	chr3	-	3279	16	NIC	ENSG00000163689.21	novel	3291	17	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	8.34958415464839	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTAAACTGCTTCTTTT	NA	False	NA	-6	True	AATAAA	-21	NA	59050073	58742005	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_58742573_58753768_58753864_58831685_58831890_58849031_58849410_58863557_58863893_58866565_58866689_58867816_58867937_58869327_58869491_58870172_58870310_58884544_58884710_58913707_58913865_58937647_58937763_59039556_59039630_59046228_59046323_59047164_59047255_59049610
H1_mix_00062843	chr3	-	1140	6	ISM	ENSG00000163689.21	ENST00000479931.5	949	8	-256	26156	-3	68	5prime_fragment	FALSE	canonical	3	17	junction_4	5.81033561853358	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTGGTTGTTTTCTTT	-11	True	NA	NA	False	AAAAAG	-13	NA	59050015	58913501	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_58913865_58937647_58937763_59039556_59039630_59046228_59046323_59047164_59047255_59049610
H1_mix_00062844	chr3	-	616	5	ISM	ENSG00000189283.10	ENST00000492590.6	3116	10	1237300	2033	-2	0	3prime_fragment	FALSE	canonical	2	9	junction_1	3.89711431702997	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTCTCGGTGTATTG	NA	False	NA	-1	True	ATTAAA	-19	NA	60014152	59749309	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_59749580_59752220_59752322_59922345_59922415_60011370_60011401_60014006
H1_mix_00062847	chr3	-	712	2	Genic_Genomic	ENSG00000226360.5	novel	652	1	NA	NA	0	34013	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCAGAGAGCCCAGTTCA	27	False	NA	NA	False	AAAAAG	-2	NA	61743106	61708441	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr3_-_61708473_61742425
H1_mix_00062857	chr3	-	220	3	NNC	ENSG00000241359.1	novel	558	5	NA	NA	-95519	-43049	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	9	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAAACCACCCAGTCTAG	NA	False	NA	-11	True	AATAAA	-9	NA	63645570	63466644	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_63466735_63549977_63550052_63645514
H1_mix_00062859	chr3	-	843	7	FSM	ENSG00000163634.12	ENST00000469584.5	836	7	0	-7	0	6	multi-exon	FALSE	canonical	3	84	junction_6	238.782792977681	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTCATTAATATTCTAG	611	False	63863900	-10	True	AATAAA	-23	NA	63863868	63833863	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_63834200_63835153_63835224_63835323_63835391_63836300_63836359_63837975_63838063_63838371_63838500_63863771
H1_mix_00062862	chr3	-	4586	3	FSM	ENSG00000163636.11	ENST00000467853.5	4583	3	0	-3	0	0	multi-exon	FALSE	canonical	3	1190	junction_1	37	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTATTTTTTTCTTAAAC	6265	False	NA	-16	True	AATAAA	-22	NA	64017732	64010550	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_64010765_64010877_64010956_64013438
H1_mix_00062863	chr3	-	2056	7	FSM	ENSG00000163636.11	ENST00000476464.5	2052	7	0	-4	0	0	multi-exon	FALSE	canonical	3	1190	junction_1	51.2466801092736	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTATTTTTTTCTTAAAC	30	True	NA	-16	True	AATAAA	-22	NA	64023437	64010550	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_64010765_64010877_64010956_64013438_64013608_64018598_64018708_64018817_64019038_64019295_64019442_64022317
H1_mix_00062865	chr3	-	1362	8	FSM	ENSG00000163636.11	ENST00000295901.9	1362	8	0	0	0	0	multi-exon	FALSE	canonical	3	889	junction_7	132.54048284142	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTATTTTTTTCTTAAAC	-27	True	NA	-16	True	AATAAA	-22	NA	64023494	64010550	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_64010765_64010877_64010956_64013438_64013608_64018598_64018708_64018817_64019038_64019295_64019442_64022317_64022524_64023274
H1_mix_00062870	chr3	-	8931	9	NIC	ENSG00000163637.13	novel	7918	9	NA	NA	-16	-584	intron_retention	FALSE	canonical	0	0	junction_7	5.30182751511212	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGTTTCAATGCATTGC	237	False	NA	NA	False	ATTAAA	-40	NA	64445261	64092819	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_64099926_64146829_64147703_64153181_64153369_64157161_64157366_64159939_64160078_64163015_64163130_64198783_64198968_64444482_64444569_64445222
H1_mix_00062872	chr3	-	428	5	FSM	ENSG00000163637.13	ENST00000498162.2	428	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	5.87367006223537	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGAGGAAGAGAAGAGGGA	253	False	NA	NA	False	NA	NA	NA	64445245	64160056	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_64160078_64163015_64163130_64198783_64198968_64444482_64444569_64445222
H1_mix_00062873	chr3	-	1811	2	FSM	ENSG00000163638.13	ENST00000477180.1	1811	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCATTTGTGTTTCGCAT	8957	False	NA	-3	True	AATAAA	-16	NA	64522511	64515656	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_64517122_64522165
H1_mix_00062874	chr3	-	374	3	FSM	ENSG00000163638.13	ENST00000467119.1	476	3	67	35	67	-35	multi-exon	FALSE	canonical	3	9	junction_1	0.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTCAAACATTCCTTTTG	NA	False	NA	NA	False	NA	NA	NA	64654612	64650936	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_64651164_64654352_64654459_64654571
H1_mix_00062877	chr3	-	7901	23	NIC	ENSG00000151276.24	novel	7851	23	NA	NA	0	130	combination_of_known_junctions	TRUE	canonical	3	81	junction_21	35.2583147687262	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGCAATAGCATAGTGCCT	16	True	NA	NA	False	NA	NA	NA	66038834	65353394	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_65357133_65361198_65361338_65363464_65363609_65364664_65364726_65364852_65364947_65375744_65375949_65379260_65379555_65381876_65382070_65383531_65383624_65391141_65391359_65401438_65401471_65429519_65430141_65430698_65430882_65437154_65437248_65439878_65440013_65442791_65442850_65448021_65448058_65453257_65453341_65470282_65470485_65478591_65478799_65493511_65493632_65621971_65622089_66037995
H1_mix_00062890	chr3	-	3259	3	Intergenic	novelGene_902	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	0.5	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAGACTATGTGTTTCTC	NA	False	NA	NA	False	AATAAA	-22	NA	67043844	67032496	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_67035323_67041864_67042058_67043604
H1_mix_00062891	chr3	-	1371	11	FSM	ENSG00000172340.15	ENST00000493112.5	1516	11	0	145	0	-145	multi-exon	TRUE	canonical	2	5	junction_1	163.148521292717	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGATTACTTTTCCAAAT	-8	True	NA	NA	False	NA	NA	NA	67654610	67360604	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_67360769_67400730_67400852_67495797_67495941_67498133_67498296_67508806_67508904_67518246_67518337_67520481_67520635_67528131_67528223_67529086_67529187_67609454_67609597_67654502
H1_mix_00062892	chr3	-	2350	11	FSM	ENSG00000172340.15	ENST00000307227.10	2350	11	0	0	0	0	multi-exon	FALSE	canonical	3	476	junction_4	39.81155611126	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGTGTGTATCTCTCAT	-10	True	NA	-1	True	AATAAA	-22	NA	67654612	67374718	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_67375860_67400730_67400852_67495797_67495941_67498133_67498296_67508806_67508904_67518246_67518337_67520481_67520635_67528131_67528223_67529086_67529187_67609454_67609597_67654502
H1_mix_00062893	chr3	-	2245	6	FSM	ENSG00000163377.16	ENST00000295569.12	2229	6	0	-16	0	16	multi-exon	FALSE	canonical	0	0	junction_1	15.3231850475024	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATATGCCTTAAGACTT	-3	True	NA	13	True	AGTAAA	-39	NA	68932547	68731749	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_68733154_68739074_68739200_68752862_68753019_68880729_68880846_68885174_68885311_68932239
H1_mix_00062895	chr3	-	3986	15	FSM	ENSG00000163378.14	ENST00000540764.5	1584	15	0	-2402	0	1	multi-exon	FALSE	canonical	3	65	junction_11	11.4107003129805	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTAAGGTTTTCTGTG	3825	False	NA	-24	True	AATAAA	-31	NA	69009846	68975215	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_68977765_68978332_68978436_68979667_68979788_68982810_68982873_68987444_68987514_68988294_68988382_68988505_68988578_68988924_68989018_68998010_68998115_69001607_69001715_69004377_69004483_69005139_69005235_69007712_69007822_69008427_69008529_69009636
H1_mix_00062896	chr3	-	4445	18	FSM	ENSG00000163378.14	ENST00000383701.8	4443	18	0	-2	0	2	multi-exon	FALSE	canonical	3	47	junction_16	13.0921672877586	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAACCATTTTTAAGGTT	-13	True	NA	-31	True	AATAAA	-24	NA	69013684	68975222	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_68977765_68978332_68978436_68979667_68979788_68982810_68982873_68987444_68987514_68988294_68988382_68988505_68988578_68988924_68989018_68998010_68998115_69001607_69001715_69004377_69004483_69005139_69005235_69007712_69007822_69008427_69008529_69009636_69009861_69011935_69011992_69012514_69012800_69013573
H1_mix_00062897	chr3	-	4401	19	NNC	ENSG00000163378.14	novel	4443	18	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_17	27.6416665270939	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTAAGGTTTTCTGTG	1	True	NA	-24	True	AATAAA	-31	NA	69013670	68975215	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_68977765_68978332_68978436_68979667_68979788_68982810_68982873_68987444_68987514_68988294_68988382_68988505_68988578_68988924_68989018_68991821_68991873_68998010_68998115_69001607_69001715_69004377_69004483_69005139_69005235_69007712_69007822_69008427_69008529_69009636_69009861_69011935_69011992_69012602_69012800_69013573
H1_mix_00062901	chr3	-	6879	17	FSM	ENSG00000144747.17	ENST00000398559.7	6879	17	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_15	11.129914644776	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTATTTCATTTTTAAC	-7	True	NA	0	True	AATAAA	-17	NA	69052333	69019826	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_69023321_69024054_69024181_69025559_69025713_69025995_69026098_69027899_69027993_69028225_69028296_69029814_69030008_69033547_69033705_69035022_69035116_69038563_69038721_69038842_69039010_69039550_69039694_69042806_69042913_69043749_69043877_69044491_69044596_69047357_69048563_69051944
H1_mix_00062902	chr3	-	7104	17	FSM	ENSG00000144747.17	ENST00000646708.1	4867	17	-24	-2213	-18	192	multi-exon	FALSE	canonical	3	12	junction_15	18.8973377754646	1075	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCCTGGGCTGGAGTGC	11	True	NA	NA	False	NA	NA	NA	69052357	69019634	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_69023321_69024054_69024181_69025559_69025713_69025995_69026098_69027899_69027993_69028225_69028296_69029814_69030008_69033547_69033705_69035022_69035116_69038563_69038721_69038842_69039010_69039550_69039694_69042806_69042913_69043749_69043877_69044491_69044596_69047348_69048563_69051944
H1_mix_00062903	chr3	-	1105	3	FSM	ENSG00000144747.17	ENST00000645406.1	1215	3	106	4	106	-4	multi-exon	FALSE	canonical	3	64	junction_2	17.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATTTGAAACATTCCTGG	NA	False	NA	NA	False	NA	NA	NA	69027992	69024802	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_69025713_69025995_69026098_69027899
H1_mix_00062905	chr3	-	2004	16	FSM	ENSG00000144744.17	ENST00000415609.6	2004	16	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_14	277.940441261953	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTCACTGAAGTTTTT	-11	True	NA	-26	True	AATAAA	-16	NA	69080381	69054729	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_69055526_69055850_69055906_69055999_69056064_69056182_69056284_69056611_69056694_69056778_69056816_69057255_69057310_69061813_69061928_69062076_69062180_69062981_69063138_69063438_69063504_69064067_69064112_69067927_69068009_69071534_69071618_69077797_69077919_69080333
H1_mix_00062906	chr3	-	2112	17	FSM	ENSG00000144744.17	ENST00000349511.8	2112	17	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_16	191.921034787097	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTCACTGAAGTTTTT	NA	False	NA	-26	True	AATAAA	-16	NA	69080408	69054729	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_69055526_69055850_69055906_69055999_69056064_69056182_69056284_69056611_69056694_69056778_69056816_69057255_69057310_69061813_69061928_69062076_69062180_69062981_69063138_69063438_69063504_69064067_69064112_69067927_69068009_69071534_69071618_69075429_69075511_69077797_69077919_69080333
H1_mix_00062910	chr3	-	5024	2	FSM	ENSG00000114861.24	ENST00000460805.5	664	2	322	-4682	322	184	multi-exon	FALSE	canonical	3	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGCAAGAGATGTTATC	NA	False	NA	NA	False	AGTAAA	-5	NA	70966030	70954508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_70959392_70965889
H1_mix_00062913	chr3	-	936	6	FSM	ENSG00000114861.24	ENST00000648895.1	1088	6	152	0	152	0	multi-exon	TRUE	canonical	0	0	junction_2	6.01331855134916	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGTTAGTGGATTAAAAT	1999	False	NA	NA	False	NA	NA	NA	71581960	71112590	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_71112638_71198201_71198393_71299819_71299881_71359149_71359245_71493425_71493556_71581548
H1_mix_00062916	chr3	-	9927	7	FSM	ENSG00000163412.13	ENST00000425534.8	9978	7	0	51	0	-51	multi-exon	FALSE	canonical	3	159	junction_6	13.8413631313297	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTATTTTCTCAAGGTT	-2	True	NA	NA	False	NA	NA	NA	71725402	71675464	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_71684729_71690009_71690166_71693874_71693942_71696459_71696521_71699613_71699709_71710411_71710485_71725191
H1_mix_00062919	chr3	-	1890	4	FSM	ENSG00000163421.9	ENST00000295619.4	1555	4	-273	-62	-215	62	multi-exon	FALSE	canonical	3	14	junction_1	2.49443825784929	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACCCCAAGGTTGGTAAAA	21	False	NA	61	True	NA	NA	NA	71785421	71771592	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_71772829_71774444_71774508_71781466_71781593_71784956
H1_mix_00062920	chr3	-	7183	4	FSM	ENSG00000163602.12	ENST00000477973.5	7215	4	-2	34	-2	-34	multi-exon	FALSE	canonical	3	14	junction_2	2.94392028877595	261	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCATCATTAAACATTCGA	1048	False	NA	-34	True	AATGAA	-8	NA	72446623	72371858	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_72378638_72379039_72379139_72379250_72379428_72446495
H1_mix_00062921	chr3	-	2853	11	FSM	ENSG00000144736.14	ENST00000325599.13	2846	11	0	-7	0	7	multi-exon	FALSE	canonical	2	129	junction_10	19.6888293202008	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGACGTATGCTTTCCTT	-9	True	NA	-5	True	AATAAA	-32	NA	72848445	72749269	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_72750837_72792915_72793037_72812670_72812795_72815349_72815404_72817229_72817385_72824423_72824552_72832368_72832482_72841044_72841200_72842279_72842403_72844358_72844424_72848197
H1_mix_00062922	chr3	-	240	1	FSM	ENSG00000240135.1	ENST00000490962.1	1366	1	1068	58	1068	-58	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCTAGTTAACAAAACTACA	NA	False	NA	NA	False	NA	NA	NA	72877034	72876794	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_72876800_72877000
H1_mix_00062923	chr3	-	3598	3	FSM	ENSG00000121440.15	ENST00000478209.1	757	3	-801	-2040	-801	1	multi-exon	FALSE	canonical	3	152	junction_2	2.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTTTTCCCTTGGTTGT	2009	False	NA	-15	True	AATAAA	-18	NA	73388947	73382429	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_73384931_73385668_73385786_73387967
H1_mix_00062924	chr3	-	4253	10	FSM	ENSG00000121440.15	ENST00000263666.9	4251	10	0	-2	0	2	multi-exon	FALSE	canonical	3	106	junction_9	16.445945877403	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTCCCTTGGTTGTG	0	True	NA	-14	True	AATAAA	-19	NA	73624941	73382428	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_73384931_73385668_73385786_73387967_73388070_73389815_73389879_73391017_73391117_73400921_73401010_73404147_73404396_73602353_73602462_73608597_73608685_73624102
H1_mix_00062925	chr3	-	274	1	FSM	ENSG00000243674.1	ENST00000479200.1	955	1	144	537	144	-537	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTATATCATTCAGCCATC	NA	False	NA	NA	False	NA	NA	NA	75348643	75348369	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_75348400_75348600
H1_mix_00062926	chr3	-	709	1	FSM	ENSG00000179799.9	ENST00000478335.2	1035	1	331	-5	331	5	mono-exon	FALSE	NA	NA	NA	NA	NA	2738	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATCTGCAAATCCTGCCC	NA	False	NA	NA	False	ATTAAA	-5	NA	75357170	75356461	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_75356500_75357200
H1_mix_00062928	chr3	-	3297	5	FSM	ENSG00000244026.7	ENST00000478666.6	2014	5	5	-1288	-1	1288	multi-exon	FALSE	canonical	3	132	junction_2	36.8739406627499	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAAAGCCCCGAGTGGAG	NA	False	NA	NA	False	AAGAAA	-44	NA	75435120	75420263	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_75423062_75426449_75426600_75430831_75430915_75432807_75432871_75434917
H1_mix_00062930	chr3	-	931	2	NNC	ENSG00000243422.3	novel	1138	3	NA	NA	11176	-93	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCTGAATATTTATTTAT	NA	False	NA	NA	False	AAAACA	-28	NA	75658980	75624367	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_75625154_75658835
H1_mix_00062936	chr3	-	3151	16	NNC	ENSG00000114480.13	novel	2941	16	NA	NA	-206	4	at_least_one_novel_splicesite	FALSE	non_canonical	3	44	junction_9	8.82420912414629	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTAATGTTTATTTTG	NA	False	NA	-1	True	AATAAA	-19	NA	81761851	81489698	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_81490464_81499109_81499226_81535192_81535326_81536910_81537096_81577924_81578097_81581164_81581276_81586091_81586191_81591036_81591165_81593907_81594024_81642780_81642991_81646391_81646483_81648855_81648992_81649795_81649922_81670837_81670954_81705443_81705614_81761374
H1_mix_00062937	chr3	-	10442	4	FSM	ENSG00000206538.9	ENST00000398399.7	10438	4	0	-4	0	4	multi-exon	FALSE	canonical	3	30	junction_3	7.11805216802087	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGGTTCTTTCTTTGTCTT	-4	True	NA	2	True	AATAAA	-20	NA	86991149	86937968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_86947068_86968589_86969124_86978525_86978803_86990617
H1_mix_00062940	chr3	-	4554	4	FSM	ENSG00000163320.12	ENST00000482016.6	4548	4	0	-6	0	0	multi-exon	FALSE	canonical	3	119	junction_2	391.091634616066	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTACTGAGTTATTTTTCT	-24	True	NA	51	True	AATATA	-25	NA	88059005	88051943	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_88056000_88057190_88057293_88058018_88058224_88058814
H1_mix_00062941	chr3	-	4495	3	FSM	ENSG00000163320.12	ENST00000309534.10	4495	3	0	0	0	0	multi-exon	FALSE	canonical	3	772	junction_1	92.5	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTACTGAGTTATTTTTCT	-1	True	NA	51	True	AATATA	-25	NA	88059048	88051943	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_88056000_88058018_88058224_88058814
H1_mix_00062942	chr3	-	7076	1	FSM	ENSG00000163320.12	ENST00000398392.2	5298	1	-1778	0	-39	0	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGAAAGCACATTTTG	NA	False	NA	-17	True	AATAAA	-23	NA	88059087	88052011	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_88052000_88059100
H1_mix_00062944	chr3	-	717	2	FSM	ENSG00000163320.12	ENST00000474441.1	717	2	0	0	0	0	multi-exon	FALSE	canonical	3	957	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATTTAATATCTACCACA	36	True	NA	NA	False	NA	NA	NA	88058945	88057637	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_88058224_88058814
H1_mix_00062948	chr3	-	3432	16	FSM	ENSG00000184500.16	ENST00000650591.1	3432	16	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_15	46.8072169174322	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATAATTTTAAAATGCAT	149	False	NA	16	True	AATAAA	-40	NA	93973933	93873123	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_93874406_93876965_93877192_93879162_93879315_93884727_93884897_93886335_93886504_93892932_93893123_93896575_93896692_93898447_93898570_93900803_93900930_93905783_93905916_93906020_93906144_93910618_93910706_93924239_93924265_93927249_93927408_93928701_93928798_93973673
H1_mix_00062950	chr3	-	3723	2	FSM	ENSG00000178700.9	ENST00000394221.3	3733	2	10	0	-7	0	multi-exon	FALSE	canonical	1	1	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTCTGAATCTCTAATA	14	True	NA	-9	True	AATAAA	-17	NA	94062906	94057921	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_94061607_94062868
H1_mix_00062951	chr3	-	3856	2	FSM	ENSG00000178700.9	ENST00000314636.3	3856	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTCTGAATCTCTAATA	4	True	NA	-9	True	AATAAA	-17	NA	94062916	94057921	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_94061607_94062745
H1_mix_00062952	chr3	-	1087	1	FSM	ENSG00000242457.1	ENST00000478252.1	1264	1	239	-62	239	62	mono-exon	FALSE	NA	NA	NA	NA	NA	1287	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTAACACTGGTTATGA	NA	False	NA	NA	False	NA	NA	NA	94076936	94075849	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_94075800_94076900
H1_mix_00062953	chr3	-	256	1	FSM	ENSG00000178660.6	ENST00000313754.4	855	1	681	-82	681	82	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGAATTTAAATAGTAAATA	NA	False	NA	NA	False	TATAAA	-41	NA	94506939	94506683	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_94506700_94506900
H1_mix_00062955	chr3	-	2496	2	FSM	ENSG00000286447.1	ENST00000662485.1	2646	2	9	141	9	-138	multi-exon	FALSE	canonical	1	2	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACTCAGAAAAGCATTCAT	NA	False	NA	NA	False	NA	NA	NA	96814398	96810978	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_96813111_96814034
H1_mix_00062956	chr3	-	4854	10	FSM	ENSG00000170854.18	ENST00000394198.7	4854	10	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_4	10.3076143496081	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGTAGTGTTCTATTC	-2	True	NA	-6	True	AATAAA	-17	NA	97972431	97941817	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_97945343_97945797_97945888_97947360_97947450_97949843_97950016_97950785_97950889_97954391_97954496_97959050_97959180_97961588_97961709_97967161_97967633_97972380
H1_mix_00062957	chr3	-	5347	10	FSM	ENSG00000170854.18	ENST00000333396.11	5347	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_9	33.9542175419916	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGTAGTGTTCTATTC	NA	False	NA	-6	True	AATAAA	-17	NA	97972457	97941817	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_97945343_97945797_97945888_97947360_97947450_97949843_97950016_97950785_97950889_97954391_97954496_97959050_97959180_97961588_97961709_97967161_97967633_97971913
H1_mix_00062958	chr3	-	2560	10	NIC	ENSG00000170854.18	novel	4854	10	NA	NA	2	299	combination_of_known_junctions	FALSE	canonical	3	27	junction_4	27.2822467486518	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTCTCCTTAAATCTAG	0	True	NA	NA	False	NA	NA	NA	97972429	97944106	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_97945343_97945797_97945888_97947360_97947450_97949843_97950013_97950785_97950889_97954391_97954496_97959050_97959180_97961588_97961709_97967161_97967633_97972380
H1_mix_00062960	chr3	-	1444	2	NNC	ENSG00000289509.1	novel	580	3	NA	NA	3	-58108	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCTGAATTGGCAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	98325216	98320824	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_98322145_98325092
H1_mix_00062961	chr3	-	2283	6	FSM	ENSG00000080822.17	ENST00000394180.6	2228	6	167	-222	0	222	multi-exon	FALSE	canonical	3	24	junction_5	394.567814196749	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTCTCAAAAGTAGTTT	-8	True	NA	NA	False	AAGAAA	-33	NA	98522899	98515257	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_98516880_98517051_98517190_98518884_98518996_98521132_98521443_98521652_98521704_98522848
H1_mix_00062964	chr3	-	3150	5	FSM	ENSG00000080822.17	ENST00000503004.5	2818	5	-332	0	0	0	multi-exon	FALSE	canonical	3	50	junction_4	345.439213176501	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAATTGTATATAGAGTGT	0	True	NA	-12	True	AATAAA	-19	NA	98522846	98515482	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_98516880_98517051_98517190_98518884_98518996_98521132_98521443_98521652
H1_mix_00062965	chr3	-	2264	5	FSM	ENSG00000080822.17	ENST00000341181.11	2010	5	-29	-225	0	222	multi-exon	FALSE	canonical	3	727	junction_2	69.0669964599591	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTCTCAAAAGTAGTTT	-5	True	NA	NA	False	AAGAAA	-33	NA	98522931	98515257	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_98516880_98517051_98517190_98518884_98518996_98521132_98521443_98522848
H1_mix_00062969	chr3	-	2713	7	FSM	ENSG00000080819.9	ENST00000647941.2	2709	7	0	-4	0	4	multi-exon	FALSE	canonical	3	99	junction_6	7.20532210707243	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATATTTTTTGTTGCC	-1	True	NA	NA	False	AATAAA	-27	NA	98593611	98579441	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_98580771_98581406_98581512_98585440_98585660_98588712_98588855_98590631_98590743_98591011_98591156_98592948
H1_mix_00062971	chr3	-	6132	16	FSM	ENSG00000057019.16	ENST00000326840.11	6128	16	0	-4	0	4	multi-exon	FALSE	canonical	3	342	junction_13	36.8598547052059	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGGCCAATATTGTGCT	-16	True	NA	5	True	TATAAA	-32	NA	98901695	98795936	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_98799842_98800578_98800717_98801599_98801650_98808080_98808175_98811193_98811320_98811467_98811555_98812331_98812483_98817768_98817894_98819201_98819418_98820247_98820289_98822227_98822362_98822668_98822742_98825314_98825367_98849460_98849599_98881539_98881768_98901121
H1_mix_00062975	chr3	-	4112	12	FSM	ENSG00000154174.8	ENST00000284320.6	4100	12	0	-12	0	12	multi-exon	FALSE	canonical	3	270	junction_9	28.3196045170126	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCATGGTGGCTCACACC	-1	True	NA	33	True	AATAGA	-19	NA	100401089	100363418	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_100365718_100368043_100368167_100369037_100369136_100372605_100372723_100373537_100373646_100375017_100375153_100377704_100377913_100381614_100381764_100384478_100384589_100386217_100386345_100386804_100386979_100400625
H1_mix_00062976	chr3	-	4979	24	FSM	ENSG00000138468.16	ENST00000394095.7	4973	24	0	-6	0	6	multi-exon	FALSE	canonical	3	55	junction_7	17.2742801917668	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATATCATGAAATTGATGC	-15	True	NA	NA	False	AATAAA	-24	NA	101513212	101324198	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_101326081_101327665_101327817_101328477_101328547_101328645_101328690_101330333_101330387_101331984_101332110_101332769_101332863_101337508_101337632_101340094_101340212_101341645_101341780_101343685_101343955_101347871_101348052_101351617_101351652_101361714_101361862_101364833_101364992_101366429_101366770_101367829_101368012_101372007_101372127_101398860_101399056_101417592_101417791_101458954_101459053_101493872_101493969_101501069_101501120_101513090
H1_mix_00062977	chr3	-	4434	21	FSM	ENSG00000138468.16	ENST00000394091.5	4434	21	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_18	24.9749374373591	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGGTGTAATTTTTTTCC	13	True	NA	NA	False	ATTAAA	-21	NA	101513184	101324272	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_101326081_101327665_101327817_101328477_101328547_101328645_101328690_101330333_101330387_101331984_101332110_101332769_101332863_101337508_101337632_101340094_101340212_101341645_101341780_101343685_101343955_101347871_101348052_101351617_101351652_101361714_101361862_101364833_101364992_101366429_101366770_101367829_101368012_101372007_101372127_101458954_101459053_101493872_101493969_101513090
H1_mix_00062978	chr3	-	5167	27	NNC	ENSG00000138468.16	novel	4973	24	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	40.07330560966	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGGTGTAATTTTTTTCC	-5	True	NA	NA	False	ATTAAA	-21	NA	101513202	101324272	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_101326081_101327665_101327817_101328477_101328547_101328645_101328690_101330333_101330387_101331984_101332110_101332769_101332863_101337508_101337632_101340094_101340212_101341645_101341780_101343685_101343955_101347871_101348052_101351617_101351652_101361714_101361862_101363129_101363200_101364833_101364992_101366429_101366770_101367829_101368012_101372007_101372127_101398860_101399056_101402966_101403048_101417592_101417791_101458954_101459053_101493872_101493969_101501069_101501120_101507923_101508045_101513090
H1_mix_00062979	chr3	-	4703	23	FSM	ENSG00000138468.16	ENST00000394094.6	4703	23	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_18	19.7477899171419	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGGTGTAATTTTTTTCC	-8	True	NA	NA	False	ATTAAA	-21	NA	101513205	101324272	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_101326081_101327665_101327817_101328477_101328547_101328645_101328690_101330333_101330387_101331984_101332110_101332769_101332863_101337508_101337632_101340094_101340212_101341645_101341780_101343685_101343955_101347871_101348052_101351617_101351652_101361714_101361862_101364833_101364992_101366429_101366770_101367829_101368012_101372007_101372127_101417592_101417791_101458954_101459053_101493872_101493969_101501069_101501120_101513090
H1_mix_00062983	chr3	-	525	2	Genic_Genomic	ENSG00000242299.1	novel	459	1	NA	NA	0	15154	multi-exon	FALSE	non_canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTCTAATCCTCTTTTC	40	False	NA	NA	False	NA	NA	NA	101576947	101561334	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr3_-_101561362_101576449
H1_mix_00062984	chr3	-	574	2	Genic_Genomic	ENSG00000242299.1	novel	459	1	NA	NA	-50	15154	multi-exon	FALSE	non_canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTCTAATCCTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	101576997	101561334	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr3_-_101561362_101576450
H1_mix_00062985	chr3	-	459	1	FSM	ENSG00000242299.1	ENST00000496294.1	459	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTAGGCCTTGTCTGTT	40	False	NA	NA	False	AAGAAA	-4	NA	101576947	101576488	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_101576500_101576900
H1_mix_00062987	chr3	-	2010	2	FSM	ENSG00000066422.6	ENST00000461821.1	2115	2	0	105	0	-105	multi-exon	FALSE	canonical	3	60	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGGCTGTGGTGTGTCA	9594	False	NA	NA	False	NA	NA	NA	101677118	101670717	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_101672214_101676604
H1_mix_00062988	chr3	-	668	5	FSM	ENSG00000114391.13	ENST00000464595.1	668	5	0	0	0	0	multi-exon	FALSE	canonical	3	7222	junction_1	491.122693428027	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTGCTGGATTTTTTTT	0	True	NA	-12	True	AATAAA	-19	NA	101686712	101681090	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_101681216_101682428_101682493_101682770_101682908_101685817_101685929_101686481
H1_mix_00062989	chr3	-	560	6	FSM	ENSG00000114391.13	ENST00000394077.8	560	6	0	0	0	0	multi-exon	FALSE	canonical	3	4949	junction_5	1250.11893834147	2195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTGCTGGATTTTTTTT	-6	True	NA	-12	True	AATAAA	-19	NA	101686718	101681090	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_101681216_101682428_101682493_101682770_101682908_101685817_101685929_101686481_101686558_101686671
H1_mix_00062990	chr3	-	478	5	FSM	ENSG00000114391.13	ENST00000495401.5	478	5	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_1	3134.19330729615	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTAGGTTGTGCTGGATTT	7	True	NA	-17	True	AATAAA	-14	NA	101686705	101681095	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_101681216_101682770_101682908_101685817_101685929_101686481_101686558_101686671
H1_mix_00062991	chr3	-	1857	2	FSM	ENSG00000114391.13	ENST00000488288.1	1857	2	0	0	0	0	multi-exon	FALSE	canonical	3	7579	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTTTAAATAAAGATTGG	823	False	NA	1	True	NA	NA	NA	101685889	101681122	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_101682908_101685817
H1_mix_00062992	chr3	-	799	5	FSM	ENSG00000114391.13	ENST00000469605.1	799	5	0	0	0	0	multi-exon	FALSE	canonical	3	4949	junction_4	1397.16147509871	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATGAAAGTTTCACAGT	-6	True	NA	NA	False	NA	NA	NA	101686695	101682041	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_101682493_101682770_101682908_101685817_101685929_101686481_101686558_101686671
H1_mix_00062993	chr3	-	6753	19	FSM	ENSG00000114423.23	ENST00000394030.8	6749	19	0	-4	0	4	multi-exon	FALSE	canonical	0	0	junction_18	29.6631812351213	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGGTACTTTATTTTTC	-15	True	NA	NA	False	TATAAA	-21	NA	105869012	105655456	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_105659230_105670232_105670353_105678430_105678572_105681478_105681611_105681723_105681819_105685319_105685467_105693493_105693589_105702093_105702460_105703987_105704174_105720046_105720251_105734008_105734141_105737170_105737259_105740493_105740632_105745916_105746039_105751461_105751619_105776395_105776543_105853413_105853665_105867409_105867592_105868735
H1_mix_00062998	chr3	-	6796	2	FSM	ENSG00000196776.17	ENST00000471694.1	6796	2	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGGGCTATTTCTATT	7497	False	NA	0	True	AATAAA	-15	NA	108054739	108043297	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_108047293_108051938
H1_mix_00062999	chr3	-	5223	9	FSM	ENSG00000196776.17	ENST00000355354.13	5228	9	0	5	0	-5	multi-exon	FALSE	canonical	3	68	junction_1	36.9653554020518	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAATGTGTTTCATAATTA	-22	True	NA	NA	False	ATTAAA	-14	NA	108091025	108043095	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_108047293_108051938_108051971_108057476_108057570_108058336_108058430_108059451_108059545_108060744_108060853_108071092_108071183_108079990_108080345_108090862
H1_mix_00063000	chr3	-	5287	11	FSM	ENSG00000196776.17	ENST00000361309.6	5292	11	0	5	0	-5	multi-exon	FALSE	canonical	3	114	junction_3	26.6953179415417	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAATGTGTTTCATAATTA	6391	False	108091051	NA	False	ATTAAA	-14	NA	108091031	108043095	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_108047293_108049618_108049652_108050577_108050603_108051938_108051971_108057476_108057570_108058336_108058430_108059451_108059545_108060744_108060853_108071092_108071183_108079990_108080345_108090862
H1_mix_00063002	chr3	-	1212	8	NIC	ENSG00000196776.17	novel	5228	9	NA	NA	10	14	combination_of_known_splicesites	FALSE	canonical	3	29	junction_1	52.5477431115976	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGATCCAGTTTTTTGTT	-12	True	NA	-5	True	AATAAA	-29	NA	108091015	108047064	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_108047293_108057476_108057570_108058336_108058430_108059451_108059545_108060744_108060853_108071092_108071183_108079990_108080345_108090862
H1_mix_00063003	chr3	-	3059	11	FSM	ENSG00000114446.5	ENST00000264538.4	3057	11	0	-2	0	2	multi-exon	FALSE	canonical	3	358	junction_4	34.6907768722466	223	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTATTTTCTTCCATCCT	-2	True	NA	NA	False	AATAAA	-18	NA	108222424	108160809	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_108162656_108163662_108163730_108165430_108165494_108166853_108166986_108167792_108167865_108191520_108191644_108206627_108206697_108213930_108214022_108218534_108218654_108219409_108219573_108222110
H1_mix_00063005	chr3	-	5175	1	FSM	ENSG00000241634.1	ENST00000489433.1	509	1	-454	-4212	-454	4212	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACTTTGTGTTATGGTTT	6742	False	NA	-4	True	ATTAAA	-26	NA	108544329	108539154	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_108539200_108544300
H1_mix_00063010	chr3	-	2822	7	FSM	ENSG00000121570.13	ENST00000335658.7	2788	7	-26	-8	-26	8	multi-exon	FALSE	canonical	3	2818	junction_3	421.61317183725	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTTTATTTACTCATCTT	14	False	NA	1	True	AATAAA	-26	NA	109337572	109326135	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_109328025_109328889_109329089_109330523_109330813_109331733_109331785_109331870_109332032_109333869_109333994_109337463
H1_mix_00063011	chr3	-	3043	2	FSM	ENSG00000121570.13	ENST00000475135.1	3043	2	0	0	0	0	multi-exon	FALSE	canonical	3	4068	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTCTTTTGTATGACTC	6826	False	NA	-16	True	AGTAAA	-13	NA	109330760	109326852	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_109328025_109328889
H1_mix_00063021	chr3	-	217	1	FSM	ENSG00000240787.1	ENST00000462510.1	417	1	139	61	139	-61	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGCCCCTCTGATTCCT	9126	False	NA	NA	False	NA	NA	NA	111570915	111570698	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_111570700_111570900
H1_mix_00063024	chr3	-	3013	11	FSM	ENSG00000144848.11	ENST00000402314.6	3010	11	0	-3	0	3	multi-exon	FALSE	canonical	3	657	junction_10	27.4082104486958	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTGTGTCTTATTAAAA	-1	True	NA	0	True	AATAAA	-20	NA	112561916	112532506	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_112534338_112536474_112536603_112537734_112537891_112538145_112538181_112541802_112541885_112544056_112544107_112548532_112548641_112550191_112550263_112553279_112553330_112558375_112558418_112561456
H1_mix_00063026	chr3	-	12227	8	FSM	ENSG00000091986.16	ENST00000206423.8	12301	8	0	74	0	-74	multi-exon	TRUE	canonical	3	40	junction_7	5.32993088747932	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCGATGTCATCTGTAT	-4	True	NA	-76	True	NA	NA	NA	112641143	112596870	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_112605764_112607175_112607257_112609977_112610082_112616709_112616859_112618967_112619105_112630112_112630270_112638027_112639917_112640326
H1_mix_00063035	chr3	-	3413	18	NIC	ENSG00000163611.11	novel	5417	18	NA	NA	1	685	intron_retention	FALSE	canonical	0	0	junction_17	26.6015063184081	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATTAATTTTCCCAGCCC	-15	True	NA	62	True	ATTAAA	-12	NA	113515186	113444568	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_113445361_113446588_113446677_113448037_113448141_113450335_113450517_113453465_113453951_113457135_113457358_113460616_113460765_113465652_113465785_113468138_113468405_113468761_113468900_113469098_113469239_113488944_113489064_113493205_113493313_113494048_113494143_113499438_113499583_113503179_113503228_113506506_113506606_113515079
H1_mix_00063037	chr3	-	13705	7	FSM	ENSG00000176542.10	ENST00000316407.9	13704	7	0	-1	0	1	multi-exon	FALSE	canonical	2	5	junction_2	4.13991411612474	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCTTCCCTGATCATTG	-19	True	NA	0	True	AATAAA	-24	NA	113696642	113648383	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_113661426_113664312_113664410_113670120_113670204_113673347_113673377_113674831_113674897_113677281_113677398_113696369
H1_mix_00063040	chr3	-	6971	5	FSM	ENSG00000121579.14	ENST00000493900.5	962	5	51	-6060	0	862	multi-exon	FALSE	canonical	3	420	junction_4	496.058464296296	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCATACGTAGCTTGTGT	-13	True	NA	NA	False	NA	NA	NA	113746249	113715595	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_113721938_113722905_113722973_113723421_113723542_113723958_113724093_113745941
H1_mix_00063041	chr3	-	6112	5	FSM	ENSG00000121579.14	ENST00000240922.8	6112	5	0	0	0	0	multi-exon	FALSE	canonical	3	1091	junction_4	211.301177232878	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTAATTGCTTATGCAGG	-13	True	NA	-5	True	AATAAA	-17	NA	113746249	113716457	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_113721938_113722905_113722973_113723421_113723542_113723958_113724096_113745941
H1_mix_00063043	chr3	-	628	1	FSM	ENSG00000273394.1	ENST00000609657.1	566	1	-104	42	-104	-42	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGTTATAAAATACAACGT	NA	False	NA	NA	False	TATAAA	-30	NA	113947674	113947046	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_113947000_113947700
H1_mix_00063047	chr3	-	2509	1	FSM	ENSG00000198406.7	ENST00000473537.1	826	1	3	-1686	3	1686	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACATAGAACTCTTTACAA	NA	False	NA	NA	False	AATAAA	-40	NA	116646724	116644215	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_116644200_116646700
H1_mix_00063049	chr3	-	2496	8	FSM	ENSG00000121578.13	ENST00000483209.5	2494	8	0	-2	0	2	multi-exon	FALSE	canonical	2	6	junction_7	108.950653499459	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTGTTTTTTATTGTTCT	263	False	NA	-6	True	AGTAAA	-25	NA	119240639	119211729	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_119212682_119216239_119216345_119218649_119218773_119224057_119224246_119226808_119227042_119229846_119230245_119236852_119237071_119240360
H1_mix_00063050	chr3	-	2234	8	FSM	ENSG00000121578.13	ENST00000393765.7	2234	8	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_6	56.6352453901999	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGTTCCTTCGTGTT	-1	True	NA	-18	True	AATAAA	-41	NA	119240878	119211741	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_119212682_119216239_119216345_119218649_119218773_119224057_119224246_119226808_119227042_119229846_119230245_119236852_119237071_119240849
H1_mix_00063051	chr3	-	5802	7	FSM	ENSG00000121578.13	ENST00000467604.5	5794	7	0	-8	0	0	multi-exon	FALSE	canonical	3	195	junction_5	57.0859488451892	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCGTGTTTTTTATTGTT	-1	True	NA	-8	True	AGTAAA	-23	NA	119240878	119211731	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_119216345_119218649_119218773_119224057_119224246_119226808_119227042_119229846_119230245_119236852_119237071_119240849
H1_mix_00063052	chr3	-	2385	9	FSM	ENSG00000121578.13	ENST00000359213.7	2385	9	0	0	0	0	multi-exon	TRUE	canonical	3	71	junction_6	101.969358142532	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGTTCCTTCGTGTT	NA	False	NA	-18	True	AATAAA	-41	NA	119240946	119211741	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_119212682_119216239_119216345_119218649_119218773_119224057_119224246_119226808_119227042_119229846_119230245_119235144_119235228_119236852_119237071_119240849
H1_mix_00063053	chr3	-	2195	7	FSM	ENSG00000121578.13	ENST00000480814.5	2107	7	-88	0	-88	0	multi-exon	TRUE	canonical	3	46	junction_2	102.604418358405	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTATCAAATACCTCTGTA	3743	False	NA	-55	True	AATAAA	-4	NA	119237159	119211778	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_119212682_119216239_119216345_119218711_119218773_119224057_119224246_119226808_119227042_119229846_119230245_119236852
H1_mix_00063061	chr3	-	547	4	FSM	ENSG00000138495.7	ENST00000468918.5	555	4	8	0	8	0	multi-exon	FALSE	canonical	0	0	junction_1	1446.69193526319	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTACAAGACGCTGTGCC	NA	False	NA	NA	False	NA	NA	NA	119677446	119660094	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_119660246_119666918_119666983_119675144_119675234_119677203
H1_mix_00063062	chr3	-	471	4	FSM	ENSG00000138495.7	ENST00000484810.5	471	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	1109.2148374213	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTCAGTTGTGTTTCTT	54	False	NA	-10	True	AGTAAA	-16	NA	119677346	119669531	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_119669666_119675144_119675234_119676861_119676967_119677203
H1_mix_00063063	chr3	-	426	3	FSM	ENSG00000138495.7	ENST00000261070.7	426	3	0	0	0	0	multi-exon	FALSE	canonical	3	2419	junction_1	339	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTCAGTTGTGTTTCTT	-6	True	NA	-10	True	AGTAAA	-16	NA	119677406	119669531	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_119669666_119675144_119675234_119677203
H1_mix_00063065	chr3	-	7006	12	FSM	ENSG00000082701.17	ENST00000316626.6	7000	12	0	-6	0	5	multi-exon	FALSE	canonical	3	8	junction_3	44.7424216769797	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCCTCTTATTTATTT	2041	False	NA	NA	False	AATAAA	-23	NA	120093666	119821315	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_119826856_119843254_119843354_119863418_119863606_119866589_119866629_119876412_119876509_119905754_119905853_119912703_119912811_119916043_119916175_119923372_119923484_119947267_119947352_120002045_120002240_120093346
H1_mix_00063070	chr3	-	1439	3	FSM	ENSG00000175697.11	ENST00000481907.1	1439	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTCAGTTGCATTTTGG	320	False	NA	NA	False	NA	NA	NA	120285074	120242859	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_120243777_120244002_120244479_120285028
H1_mix_00063071	chr3	-	7918	4	FSM	ENSG00000163428.4	ENST00000295628.4	7918	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	4.64279609239471	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTTCTAGATGCAATGG	-25	True	NA	50	True	ATTAAA	-17	NA	120349354	120324508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_120331409_120334861_120335140_120335824_120335954_120348743
H1_mix_00063072	chr3	-	5682	11	FSM	ENSG00000163430.12	ENST00000295633.8	5682	11	0	0	0	0	multi-exon	FALSE	canonical	3	1938	junction_5	153.621482872676	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTCTTGTCATTTTCTT	0	True	NA	NA	False	ATTAAA	-18	NA	120450992	120392292	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_120396997_120399882_120399960_120402807_120402919_120403241_120403355_120404852_120404972_120409531_120409663_120410951_120410985_120411853_120411984_120415922_120416028_120450683_120450747_120450896
H1_mix_00063075	chr3	-	542	3	FSM	ENSG00000163430.12	ENST00000472536.5	540	3	0	-2	0	2	multi-exon	FALSE	canonical	2	8	junction_1	1009	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTATAAGCTTCCTTT	0	True	NA	-5	True	ATTAAA	-17	NA	120450992	120421169	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_120421553_120450683_120450747_120450896
H1_mix_00063077	chr3	-	5604	8	FSM	ENSG00000144840.10	ENST00000273375.8	5605	8	0	1	0	-1	multi-exon	FALSE	canonical	3	167	junction_6	10.4744587313276	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTATCTGTAGCTGTGTAA	0	True	NA	NA	False	ATTAAA	-29	NA	120742516	120684938	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_120689889_120690448_120690488_120694152_120694225_120698422_120698574_120705999_120706115_120709779_120709910_120730695_120730788_120742461
H1_mix_00063080	chr3	-	8762	30	FSM	ENSG00000051341.15	ENST00000264233.6	8757	30	0	-5	0	5	multi-exon	FALSE	canonical	3	40	junction_16	14.4691233021212	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAACAATTGTTTTGTTA	-6	True	NA	-7	True	AATAAA	-22	NA	121545988	121431425	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_121432418_121432917_121433034_121436121_121436276_121439991_121440117_121449314_121449427_121460049_121460235_121467518_121467641_121468304_121468432_121471989_121472165_121473349_121473488_121476539_121476734_121481571_121481813_121483385_121483583_121485040_121485185_121487301_121490409_121493477_121493722_121496807_121496933_121498476_121498671_121509560_121509704_121510038_121510244_121511886_121512030_121519870_121520084_121522002_121522150_121529644_121529793_121532989_121533210_121537099_121537209_121539432_121539590_121541348_121541480_121544726_121544907_121545714
H1_mix_00063083	chr3	-	11201	22	FSM	ENSG00000173230.16	ENST00000393667.7	11198	22	0	-3	0	1	multi-exon	FALSE	canonical	3	45	junction_4	55.2419949362362	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGTGTGTATGTGTGTG	-12	True	NA	NA	False	AATAAA	-19	NA	121749740	121663199	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_121664615_121664925_121665032_121667475_121667611_121668060_121668159_121669196_121669356_121676892_121677031_121677284_121677451_121681686_121681866_121690669_121692582_121693740_121698930_121699811_121699886_121702480_121702596_121714860_121714977_121716736_121717140_121718387_121718502_121719645_121719769_121722261_121722379_121726912_121727042_121729187_121729341_121729864_121730018_121730875_121730974_121749631
H1_mix_00063084	chr3	-	11186	22	FSM	ENSG00000173230.16	ENST00000340645.9	11187	22	0	1	0	1	multi-exon	FALSE	canonical	3	17	junction_16	55.7815629616086	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGTGTGTATGTGTGTG	7	True	NA	NA	False	AATAAA	-19	NA	121749755	121663199	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_121664615_121664925_121665032_121667475_121667611_121668060_121668159_121669211_121669356_121676892_121677031_121677284_121677451_121681686_121681866_121690669_121692582_121693740_121698930_121699811_121699886_121702480_121702596_121714860_121714977_121716736_121717140_121718387_121718502_121719645_121719754_121722261_121722379_121726912_121727042_121729187_121729341_121729864_121730018_121730875_121730974_121749631
H1_mix_00063085	chr3	-	10295	22	FSM	ENSG00000173230.16	ENST00000482512.5	10295	22	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_20	57.9424219638647	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTTGATTGATAACTTT	6	True	NA	-15	True	AATAAA	-23	NA	121749722	121664100	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_121664615_121664925_121665032_121667475_121667611_121668060_121668159_121669211_121669356_121676892_121677031_121677284_121677451_121681686_121681866_121690669_121692582_121693740_121698930_121699811_121699886_121702480_121702596_121714860_121714977_121716736_121717140_121718387_121718502_121719645_121719769_121722261_121722379_121726912_121727042_121729187_121729341_121729864_121730018_121730847_121730974_121749631
H1_mix_00063088	chr3	-	2536	16	NNC	ENSG00000173226.17	novel	2577	15	NA	NA	0	13238	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	73.643887880952	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACCCACAAAAATTAGC	40	True	NA	NA	False	NA	NA	NA	121834992	121756522	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_121756551_121769761_121770575_121772556_121772714_121781742_121781875_121788283_121788433_121790072_121790216_121795456_121795567_121797117_121797228_121799195_121799375_121807343_121807444_121808915_121809010_121826050_121826181_121828469_121828633_121828860_121828973_121834390_121834480_121834965
H1_mix_00063089	chr3	-	2892	15	FSM	ENSG00000173226.17	ENST00000310864.11	2577	15	44	-359	0	359	multi-exon	FALSE	canonical	3	233	junction_14	24.9813195514291	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTATATTTGTACTTATA	16	True	NA	NA	False	AGTAAA	-14	NA	121835016	121769401	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_121770575_121772556_121772714_121781742_121781875_121788283_121788433_121790072_121790216_121795456_121795567_121797117_121797228_121799195_121799375_121807343_121807444_121808915_121809010_121826050_121826181_121828469_121828633_121828860_121828973_121834390_121834480_121834965
H1_mix_00063093	chr3	-	720	5	FSM	ENSG00000160124.9	ENST00000291458.9	720	5	0	0	0	0	multi-exon	FALSE	canonical	3	785	junction_1	100.469833781091	3473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTATTTGATTGTTTT	5	True	NA	NA	False	ATTAAA	-22	NA	122383231	122359590	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_122359920_122362967_122363028_122368175_122368323_122371674_122371801_122383173
H1_mix_00063094	chr3	-	573	3	FSM	ENSG00000160124.9	ENST00000460810.1	573	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	371	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATTT	897	False	NA	NA	False	NA	NA	NA	122365574	122359645	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_122359920_122362967_122363028_122365335
H1_mix_00063095	chr3	-	569	5	NIC	ENSG00000160124.9	novel	720	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_1	357.404882451261	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATTT	9	True	NA	NA	False	NA	NA	NA	122383227	122359645	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_122359828_122362967_122363028_122368175_122368323_122371674_122371801_122383173
H1_mix_00063096	chr3	-	431	5	FSM	ENSG00000160124.9	ENST00000479414.1	431	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	402.257380292767	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTTTTTTTTTTTTTT	NA	False	NA	-19	True	AATAAA	-7	NA	122373022	122359861	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_122359920_122362967_122363028_122368175_122368323_122371674_122371801_122372982
H1_mix_00063100	chr3	-	7364	14	FSM	ENSG00000114030.13	ENST00000344337.11	6888	14	5	-481	0	481	multi-exon	FALSE	canonical	3	272	junction_4	21.8512995023369	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGCTGATGGGTATA	-21	True	NA	NA	False	NA	NA	NA	122514934	122421420	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_122427173_122427537_122427717_122433660_122433789_122437169_122437296_122442037_122442117_122449573_122449738_122451533_122451634_122451975_122452065_122453869_122454002_122461223_122461319_122463941_122464042_122467321_122467430_122496436_122496571_122514756
H1_mix_00063112	chr3	-	10068	34	FSM	ENSG00000065534.20	ENST00000360304.8	10113	34	0	45	0	-45	multi-exon	FALSE	canonical	3	11	junction_32	8.03539004112107	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTTTCATCAATTGTAT	-9	True	NA	NA	False	ATTAAA	-38	NA	123884332	123610093	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_123614350_123618638_123618771_123620206_123620337_123626817_123626942_123629473_123629627_123638070_123638195_123640286_123640505_123647223_123647428_123648970_123649065_123649161_123649195_123657125_123657429_123664104_123664259_123666218_123666347_123667136_123667188_123682223_123682311_123692734_123692852_123700019_123701006_123701437_123701510_123707753_123708004_123708697_123708896_123709755_123709894_123722127_123722281_123725943_123726079_123732895_123733103_123733686_123734223_123735397_123735417_123737377_123737544_123738896_123739063_123739952_123740002_123752330_123752539_123793676_123793845_123831547_123831671_123876558_123876618_123884205
H1_mix_00063116	chr3	-	4132	13	FSM	ENSG00000175455.16	ENST00000409697.8	4131	13	0	-1	0	1	multi-exon	FALSE	canonical	3	87	junction_9	49.2456991917963	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCATCTGTCTACTCCC	3	True	NA	NA	False	AATAAA	-24	NA	123961229	123913420	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_123915719_123931101_123931235_123931307_123931527_123933672_123933756_123944848_123944991_123946802_123947320_123948690_123948786_123948895_123949133_123955842_123955966_123956045_123956116_123956354_123956428_123956739_123956796_123961143
H1_mix_00063117	chr3	-	4134	12	FSM	ENSG00000175455.16	ENST00000488653.6	4156	12	22	0	-5	0	multi-exon	FALSE	canonical	3	29	junction_8	62.4170192937845	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAATAAAAAATAATAAAA	-7	True	NA	NA	False	NA	NA	NA	123961386	123913452	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_123915719_123931101_123931235_123931307_123931527_123933672_123933756_123944848_123944991_123946802_123947320_123948690_123948786_123948895_123949133_123956045_123956116_123956354_123956428_123956739_123956796_123961143
H1_mix_00063118	chr3	-	5393	3	ISM	ENSG00000175455.16	ENST00000485727.5	7917	9	22750	-232	-2874	-32	intron_retention	FALSE	canonical	3	217	junction_2	14.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAGGCCACAACTCTTTA	NA	False	NA	NA	False	NA	NA	NA	123934333	123913484	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_123915719_123931101_123931235_123931307
H1_mix_00063119	chr3	-	6478	9	FSM	ENSG00000175455.16	ENST00000489746.5	6476	9	0	-2	0	0	multi-exon	FALSE	canonical	3	154	junction_8	30.59386172094	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGAACCTCCTCGTGTT	2536	False	NA	-37	True	ATTAAA	-15	NA	123958900	123913724	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_123915719_123931101_123931235_123931307_123931527_123933672_123933756_123944848_123944991_123946802_123947320_123948690_123948786_123948895_123949133_123955842
H1_mix_00063127	chr3	-	9195	17	FSM	ENSG00000173706.14	ENST00000311127.9	9195	17	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_12	7.21732940567354	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGTTTTCCTCTTAAT	0	True	NA	-5	True	AATAAA	-17	NA	125055997	124965709	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_124970802_124973730_124973906_124977858_124977947_124990786_124990825_124990943_124990987_124997688_124997824_125001851_125002013_125002256_125002316_125005264_125005369_125009704_125009825_125010438_125010556_125012622_125013991_125019261_125019598_125020791_125021131_125027204_125027508_125029194_125029489_125055574
H1_mix_00063129	chr3	-	3486	14	FSM	ENSG00000221955.11	ENST00000469902.6	3485	14	0	-1	0	1	multi-exon	TRUE	canonical	3	30	junction_13	20.8417537223923	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTAATGGTGACTCATAT	0	True	NA	-7	True	ATTAAA	-15	NA	125212748	125082642	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_125084053_125088309_125088371_125091438_125091557_125092100_125092199_125107480_125108127_125110188_125110336_125118768_125118857_125120598_125120687_125135668_125135783_125177742_125177975_125187236_125187429_125190374_125190522_125211298_125211395_125212699
H1_mix_00063130	chr3	-	2481	11	NIC	ENSG00000221955.11	novel	3485	14	NA	NA	24	-73	combination_of_known_junctions	FALSE	canonical	1	6	junction_6	29.8899648711737	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTATTGTATTATTT	24	False	NA	-76	True	NA	NA	NA	125212724	125083215	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_125084053_125088309_125088371_125091438_125091557_125092100_125092199_125107480_125108127_125110188_125110336_125135668_125135783_125187236_125187429_125190374_125190522_125211298_125211395_125212699
H1_mix_00063131	chr3	-	891	6	NIC	ENSG00000221955.11	novel	3485	14	NA	NA	14	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	25.7945730726446	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTGCCCAAAGAGTCTTG	14	False	NA	NA	False	NA	NA	NA	125212734	125107852	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_125108127_125110188_125110336_125187236_125187429_125190374_125190522_125211298_125211395_125212699
H1_mix_00063133	chr3	-	9355	8	FSM	ENSG00000163848.20	ENST00000492394.5	2949	8	2	-6408	0	-2	multi-exon	FALSE	canonical	3	11	junction_7	26.7444443973407	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAATGTGTTGTCATTGA	70	False	NA	-4	True	AATAAA	-17	NA	125375249	125225670	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_125233940_125234210_125234330_125277725_125277810_125279123_125279248_125288102_125288229_125313307_125313657_125323308_125323445_125375101
H1_mix_00063135	chr3	-	2952	9	FSM	ENSG00000163848.20	ENST00000484491.5	2952	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	24.8596057893121	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGGAAAAAAAAAAGAC	70	False	NA	2	True	NA	NA	NA	125375249	125232075	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_125233940_125234210_125234330_125277725_125277810_125279123_125279248_125288102_125288229_125313307_125313657_125323387_125323445_125331157_125331239_125375101
H1_mix_00063136	chr3	-	2518	14	FSM	ENSG00000114520.11	ENST00000251775.9	2512	14	0	-6	0	6	multi-exon	FALSE	canonical	3	246	junction_10	17.9631443854637	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATTTTTGTTAATTTAA	-14	True	NA	-4	True	AATAAA	-27	NA	125520202	125446643	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_125447827_125451304_125451420_125453809_125453956_125457265_125457366_125460770_125460861_125469453_125469520_125476694_125476757_125480246_125480320_125489407_125489464_125497340_125497389_125497833_125497984_125498058_125498195_125504622_125504745_125520031
H1_mix_00063138	chr3	-	5306	13	FSM	ENSG00000252965.1_ENSG00000144909.8	ENST00000296220.6	4598	13	-94	-614	-94	0	multi-exon	FALSE	canonical	3	125	junction_6	14.5945195193264	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAATAAATAAAAAT	NA	False	NA	-61	True	NA	NA	NA	125595591	125528243	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_125530581_125531860_125532015_125538450_125538634_125547405_125547593_125552180_125552680_125560378_125560520_125563697_125563844_125567393_125567596_125576188_125576366_125578959_125579040_125579864_125580041_125582909_125582979_125594636
H1_mix_00063139	chr3	-	684	5	FSM	ENSG00000241288.8	ENST00000599350.5	686	5	0	2	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.54835134966506	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTGTCTTGCCTGATG	NA	False	NA	-1	True	GATAAA	-15	NA	125885968	125827239	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_125827456_125872072_125872254_125873740_125873846_125875073_125875167_125885879
H1_mix_00063140	chr3	-	380	2	FSM	ENSG00000241288.8	ENST00000614362.1	540	2	160	0	160	0	multi-exon	FALSE	canonical	2	6	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGCTCTTCCTCCCTG	NA	False	NA	NA	False	NA	NA	NA	125853487	125848229	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_125848448_125853325
H1_mix_00063142	chr3	-	805	6	FSM	ENSG00000189366.11	ENST00000340333.7	805	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	3.61109401705356	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTGTGCTTGGCTCTGA	25	False	NA	-3	True	AATGAA	-18	NA	125937039	125929274	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_125929568_125930556_125930630_125931637_125931753_125932649_125932710_125933574_125933697_125936897
H1_mix_00063143	chr3	-	2424	10	NIC	ENSG00000114544.17	novel	2182	11	NA	NA	-98	72	intron_retention	FALSE	canonical	3	6	junction_8	25.4636026855666	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTAGTGCAGTGTTTC	NA	False	NA	43	True	TATAAA	-19	NA	126084402	126006284	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_126007226_126008731_126008881_126012614_126012750_126015493_126015574_126016730_126016876_126022785_126022933_126026334_126026480_126033606_126033679_126067946_126068247_126084092
H1_mix_00063144	chr3	-	2182	11	FSM	ENSG00000114544.17	ENST00000360370.9	2182	11	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_10	13.8982013224734	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTTATGTCTTTAAAGAT	7	True	NA	-29	True	AATAAA	-21	NA	126084124	126006356	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_126007226_126008731_126008881_126012614_126012750_126015493_126015574_126016730_126016876_126022785_126022933_126026334_126026480_126033606_126033679_126050942_126051051_126067946_126068247_126084092
H1_mix_00063145	chr3	-	1705	11	FSM	ENSG00000114544.17	ENST00000346785.9	1705	11	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_9	29.0489242485845	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTTATGTCTTTAAAGAT	-8	True	NA	-29	True	AATAAA	-21	NA	126084304	126006356	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_126006565_126007113_126007226_126008731_126008881_126012614_126012750_126015493_126015574_126016730_126016876_126022785_126022933_126026334_126026480_126033606_126033679_126067946_126068247_126084092
H1_mix_00063148	chr3	-	2542	3	FSM	ENSG00000163884.4	ENST00000296233.4	2540	3	0	-2	0	2	multi-exon	FALSE	canonical	3	58	junction_2	4.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCATTCATGTGCTGT	-2	True	NA	-7	True	AATAAA	-20	NA	126357408	126342632	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_126343896_126351840_126352948_126357236
H1_mix_00063151	chr3	-	3560	10	NNC	ENSG00000070476.15	novel	3377	10	NA	NA	-150	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	29.0546526309673	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGCGTGTATGTTTTATT	-8	True	NA	-1	True	TATAAA	-41	NA	126476041	126437600	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_126438462_126439631_126439728_126441764_126441980_126459652_126459738_126461534_126462221_126466154_126466326_126470894_126471026_126471972_126472052_126472152_126472306_126474958
H1_mix_00063152	chr3	-	2921	16	FSM	ENSG00000197763.20	ENST00000524230.9	2921	16	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	9.77388811522256	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAAGTGGTTGCATGGGA	-7	True	NA	NA	False	CATAAA	-14	NA	126655124	126607049	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_126607974_126608498_126608634_126611036_126611133_126615354_126615463_126621741_126621899_126622463_126622541_126629378_126629472_126630711_126630938_126631763_126631880_126633908_126634052_126642031_126642152_126643980_126644054_126644296_126644402_126646110_126646221_126647235_126647297_126654747
H1_mix_00063153	chr3	-	3697	11	FSM	ENSG00000163870.16	ENST00000355552.8	3752	11	0	55	0	-21	multi-exon	TRUE	canonical	3	172	junction_10	27.8251684631019	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCTAGAATAAAGACTGCA	-9	True	NA	NA	False	NA	NA	NA	127590733	127571286	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_127573789_127575184_127575266_127575402_127575506_127575748_127575810_127575939_127576051_127576616_127576697_127576820_127576894_127576989_127577077_127579739_127579873_127580021_127580164_127590409
H1_mix_00063155	chr3	-	1798	11	NIC	ENSG00000163870.16	novel	1903	12	NA	NA	3	4	combination_of_known_junctions	FALSE	canonical	3	14	junction_10	67.0340212131124	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATGTGGAGGTTTTGCAG	-24	True	NA	-15	True	AATAAA	-22	NA	127591085	127573064	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_127573789_127575184_127575266_127575402_127575506_127575748_127575810_127575939_127576051_127576616_127576697_127576820_127576894_127576989_127577077_127579739_127579873_127580021_127580164_127590882
H1_mix_00063156	chr3	-	907	3	NNC	ENSG00000163870.16	novel	4235	13	NA	NA	0	-12357	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	3	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACAGCATGTT	NA	False	NA	NA	False	NA	NA	NA	127598251	127592378	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_127592955_127594799_127594934_127598054
H1_mix_00063159	chr3	-	1840	11	FSM	ENSG00000175792.12	ENST00000322623.10	1899	11	0	59	0	-59	multi-exon	FALSE	canonical	3	830	junction_6	76.4827431516417	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACATTTGTCACCGTGAA	-9	True	NA	83	True	NA	NA	NA	128123812	128080868	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_128081410_128082482_128082575_128087705_128087809_128097299_128097499_128098881_128098946_128100594_128100745_128101558_128101649_128104772_128104925_128112887_128113021_128119327_128119415_128123583
H1_mix_00063160	chr3	-	395	2	FSM	ENSG00000175792.12	ENST00000478243.1	395	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGGCTTTGTTCCCGCT	6865	False	NA	NA	False	NA	NA	NA	128087811	128084842	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_128085132_128087705
H1_mix_00063164	chr3	-	1634	8	NNC	ENSG00000114656.13	novel	6034	8	NA	NA	1	36	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	8.65907569182385	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAAAAACATCTAGTAAAG	-1	True	NA	-3	True	AATAAA	-19	NA	128994075	128970943	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_128971434_128975778_128975904_128976978_128977067_128978044_128978186_128987615_128987830_128988727_128988914_128993042_128993337_128993979
H1_mix_00063165	chr3	-	464	4	FSM	ENSG00000114656.13	ENST00000507225.1	594	4	130	0	130	0	multi-exon	FALSE	canonical	3	16	junction_1	3.85861230093008	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCCATCCAGCTGGCCGT	NA	False	NA	NA	False	NA	NA	NA	128978185	128971323	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_128971434_128975778_128975904_128976978_128977067_128978044
H1_mix_00063170	chr3	-	3592	11	FSM	ENSG00000240682.10	ENST00000393295.8	3612	11	0	20	0	-20	multi-exon	FALSE	canonical	3	167	junction_3	28.7229873098186	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGAATGGTTTATTTTA	0	True	NA	-20	True	AATAAA	-3	NA	129161063	129127434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_129130189_129130549_129130637_129134073_129134196_129134831_129134955_129140367_129140486_129145760_129145874_129156632_129156676_129156854_129156921_129158507_129158560_129159153_129159177_129160972
H1_mix_00063171	chr3	-	1704	12	FSM	ENSG00000240682.10	ENST00000273541.12	1704	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	85.9920234624907	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCACGCAACCCACAAGT	15	True	NA	NA	False	NA	NA	NA	129161048	129129373	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_129130189_129130549_129130637_129134073_129134196_129134831_129134955_129137130_129137197_129140367_129140486_129145760_129145874_129156632_129156676_129156854_129156921_129158507_129158560_129159153_129159177_129160972
H1_mix_00063173	chr3	-	1626	5	FSM	ENSG00000169714.17	ENST00000502976.5	1626	5	0	0	0	0	multi-exon	FALSE	canonical	3	2716	junction_3	1668.75647938817	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGACAGTTTGGACTTTTC	16	False	NA	-15	True	ATTAAA	-24	NA	129183905	129169483	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_129170571_129171078_129171278_129171445_129171539_129171654_129171772_129183775
H1_mix_00063174	chr3	-	1644	5	FSM	ENSG00000169714.17	ENST00000451728.6	1641	5	0	-3	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2735.24828626214	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGACAGTTTGGACTTTTC	-5	True	NA	-15	True	ATTAAA	-24	NA	129183899	129169483	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_129170571_129171078_129171281_129171445_129171539_129171633_129171772_129183775
H1_mix_00063175	chr3	-	1549	5	FSM	ENSG00000169714.17	ENST00000504813.5	1549	5	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_3	2600.62482876712	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTCTTTTTGTTTGTTT	-1	True	NA	-37	True	AATAAA	-27	NA	129183922	129169568	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_129170571_129171078_129171278_129171445_129171509_129171633_129171772_129183775
H1_mix_00063178	chr3	-	1418	1	FSM	ENSG00000286729.1	ENST00000652851.1	1030	1	38	-426	38	426	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACCAGGATGTCATGACCA	NA	False	NA	NA	False	NA	NA	NA	129278744	129277326	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_129277300_129278700
H1_mix_00063181	chr3	-	1516	1	FSM	ENSG00000184897.6	ENST00000333762.6	1516	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	467	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTCTCGTTTAATCTGA	-1	True	NA	-10	True	AATAAA	-17	NA	129316286	129314770	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_129314800_129316300
H1_mix_00063185	chr3	-	2405	8	FSM	ENSG00000129071.10	ENST00000429544.7	2394	8	0	-11	0	11	multi-exon	FALSE	canonical	3	223	junction_5	34.0072021183509	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATTGTGTATTGTTGAC	2	True	NA	NA	False	AATAAA	-37	NA	129439948	129430935	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_129431579_129432502_129432607_129433097_129433248_129433849_129433985_129434061_129434137_129436460_129437309_129437719_129437951_129439729
H1_mix_00063187	chr3	-	3402	7	NIC	ENSG00000129071.10	novel	2394	8	NA	NA	6	3	intron_retention	FALSE	canonical	3	223	junction_4	36.4813498775592	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTGGCATTGTGTA	-4	True	NA	NA	False	AATAAA	-29	NA	129440029	129430943	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_129432607_129433097_129433248_129433849_129433985_129434061_129434137_129436460_129437309_129437719_129437951_129439729
H1_mix_00063191	chr3	-	7044	36	FSM	ENSG00000004399.13	ENST00000324093.9	6913	36	-130	-1	-130	1	multi-exon	FALSE	canonical	3	35	junction_24	10.5891742947643	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGCTCCAGCCTTTGTC	2	True	NA	0	True	AATAAA	-21	NA	129606806	129555212	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_129556429_129556616_129556692_129557082_129557224_129558427_129558576_129559619_129559784_129560329_129560435_129560688_129560724_129561645_129561710_129561799_129561904_129562786_129562944_129563093_129563241_129565339_129565539_129565886_129566018_129566526_129566632_129567491_129567605_129567697_129567806_129569842_129569958_129570785_129570936_129571039_129571304_129571508_129571600_129571676_129571845_129572608_129572749_129572841_129572942_129573593_129573746_129574335_129574491_129575468_129575563_129575765_129575856_129578328_129578434_129583566_129583670_129584124_129584234_129584384_129584563_129585951_129586082_129586171_129586273_129586587_129586720_129589350_129589528_129605328
H1_mix_00063193	chr3	-	6314	7	FSM	ENSG00000172765.18	ENST00000393238.8	6303	7	0	-11	0	11	multi-exon	FALSE	canonical	0	0	junction_4	17.0098010962308	197	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCATGTTTGTTTTGCTT	-5	True	NA	-5	True	AATAAA	-27	NA	129893711	129647780	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_129651796_129654967_129655104_129670329_129671265_129827802_129828509_129832773_129832827_129880308_129880560_129893493
H1_mix_00063195	chr3	-	1296	1	FSM	ENSG00000203644.3	ENST00000366451.3	910	1	-388	2	-388	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACAGCATTCTTTTTTCA	NA	False	NA	-1	True	AATAAA	-19	NA	129848345	129847049	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_129847000_129848300
H1_mix_00063196	chr3	-	1825	3	Fusion	ENSG00000172765.18_ENSG00000203644.3	novel	557	4	NA	NA	0	-9	multi-exon	FALSE	canonical	3	17	junction_1	7	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCGAGGAGACAGCATTCT	-5	True	NA	-8	True	AATAAA	-12	NA	129893711	129847056	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr3_-_129848413_129880308_129880560_129893493
H1_mix_00063198	chr3	-	5033	20	FSM	ENSG00000196455.8	ENST00000356763.8	5016	20	0	-17	0	17	multi-exon	TRUE	canonical	3	196	junction_17	31.3046862226949	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGTTTTGGTGGTATT	22	False	130746851	5	True	ATTAAA	-45	NA	130746829	130678916	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_130679486_130680612_130680722_130680976_130681066_130681490_130681592_130684249_130684382_130686210_130686423_130690489_130690655_130703722_130703889_130705560_130705772_130706947_130707136_130708290_130708493_130716395_130716600_130718388_130718535_130723413_130723588_130728462_130728685_130730307_130730443_130733547_130734131_130735868_130736003_130744485_130745265_130746317
H1_mix_00063199	chr3	-	1906	2	FSM	ENSG00000250608.2	ENST00000511699.1	2189	2	283	0	283	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTAGCTTGACAAATCAAC	NA	False	NA	-4	True	AATAAA	-14	NA	131330585	131327562	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_131327731_131328847
H1_mix_00063200	chr3	-	4171	1	FSM	ENSG00000261167.1	ENST00000565095.1	3473	1	-701	3	-701	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCTGTCAATCTTGCCTA	NA	False	NA	NA	False	AATACA	-14	NA	131459299	131455128	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_131455100_131459300
H1_mix_00063201	chr3	-	1708	10	FSM	ENSG00000114686.9	ENST00000264995.8	1708	10	0	0	0	0	multi-exon	FALSE	canonical	3	1004	junction_6	110.49562864936	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCTGTTTACATTTTTGT	-3	True	NA	-12	True	AATAAA	-14	NA	131502971	131462211	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_131462876_131468090_131468169_131469695_131469774_131471170_131471280_131487679_131487741_131489980_131490081_131498178_131498278_131500429_131500522_131501530_131501716_131502729
H1_mix_00063202	chr3	-	1377	10	FSM	ENSG00000114686.9	ENST00000511168.5	1377	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_9	403.067895515212	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTTATCTTAAGATGTCT	-15	True	NA	43	True	NA	NA	NA	131502983	131462435	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_131462876_131468090_131468169_131469695_131469774_131471170_131471280_131487679_131487741_131489980_131490081_131498178_131498278_131500429_131500522_131501530_131501716_131502848
H1_mix_00063203	chr3	-	1459	11	FSM	ENSG00000114686.9	ENST00000425847.6	1457	11	0	-2	0	0	multi-exon	FALSE	canonical	3	17	junction_10	496.139990325311	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATTACCACATTAAATA	-15	True	NA	-75	True	ATTAAA	-10	NA	131502983	131462553	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_131462876_131468090_131468169_131469695_131469774_131471170_131471280_131487679_131487741_131489980_131490081_131498178_131498278_131500429_131500522_131501530_131501716_131501843_131501925_131502729
H1_mix_00063207	chr3	-	4578	19	FSM	ENSG00000240303.8	ENST00000496418.5	3684	19	-769	-125	-336	125	multi-exon	FALSE	canonical	3	43	junction_4	8.74625140161469	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCCCTTCCCTGAATTT	527	False	NA	NA	False	NA	NA	NA	132660418	132558012	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_132559086_132559832_132559943_132561100_132561218_132575771_132575927_132576943_132577016_132578795_132579559_132603228_132603328_132605097_132605206_132618633_132618773_132619467_132619546_132626690_132626818_132628339_132628447_132630436_132630559_132631340_132631480_132639491_132639657_132641971_132642134_132642676_132642803_132644796_132644897_132659602
H1_mix_00063208	chr3	-	3234	20	FSM	ENSG00000240303.8	ENST00000264990.11	3231	20	0	-3	0	0	multi-exon	FALSE	canonical	3	36	junction_6	10.7035086281513	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTAATTTGTTTCTCTG	-2	True	NA	0	True	ATTAAA	-22	NA	132659809	132558137	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_132559086_132559832_132559943_132561100_132561218_132575771_132575927_132576943_132577016_132578795_132578882_132579491_132579559_132603228_132603328_132605097_132605206_132618633_132618773_132619467_132619546_132626690_132626818_132628339_132628447_132630436_132630559_132631340_132631480_132639491_132639657_132641971_132642134_132642676_132642803_132644796_132644897_132659602
H1_mix_00063210	chr3	-	5369	27	FSM	ENSG00000113971.21	ENST00000337331.10	5348	27	0	-21	0	21	multi-exon	FALSE	canonical	3	13	junction_15	6.75490179239137	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAGAGGGCTGTTTTGCA	-6	True	NA	-3	True	AATAAA	-39	NA	132722409	132680587	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_132682091_132682702_132682819_132683398_132683525_132684553_132684795_132686259_132686388_132687150_132687227_132688649_132688892_132689073_132689264_132690527_132690651_132691191_132691287_132692653_132692819_132694826_132694966_132696730_132696814_132697259_132697363_132699352_132699451_132699917_132700062_132700333_132700449_132701429_132701534_132704197_132704372_132705739_132705815_132708100_132708258_132713125_132713287_132715084_132715219_132716756_132716910_132718993_132719145_132719704_132719831_132721962
H1_mix_00063211	chr3	-	1440	3	FSM	ENSG00000113971.21	ENST00000684756.1	1440	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGTCTCTACTAAATACAAA	438	False	NA	NA	False	NA	NA	NA	132722078	132717946	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_132719145_132719704_132719831_132721962
H1_mix_00063212	chr3	-	6140	28	FSM	ENSG00000163781.14	ENST00000260810.10	5761	28	0	-379	0	379	multi-exon	TRUE	canonical	3	137	junction_21	33.8682997564841	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTATTGCATTAGCCTT	-3	True	NA	0	True	ATTAAA	-18	NA	133661941	133599858	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_133601394_133608534_133608697_133608872_133608963_133611003_133611142_133612388_133612553_133616813_133616926_133617159_133617327_133618212_133618434_133620154_133620348_133623090_133623194_133623310_133623458_133624051_133624176_133628361_133628472_133628559_133628734_133637875_133638163_133639958_133640171_133643199_133643373_133644019_133644364_133649382_133649634_133649779_133649944_133652462_133652630_133653344_133653525_133655289_133655487_133656675_133656858_133657797_133657942_133659015_133659151_133661043_133661135_133661768
H1_mix_00063213	chr3	-	6152	28	FSM	ENSG00000163781.14	ENST00000642236.1	6152	28	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_21	42.8237847838077	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCGAAACTCCATCTCAAAA	NA	False	NA	NA	False	NA	NA	NA	133662380	133600270	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_133601394_133608534_133608697_133608872_133608963_133611003_133611142_133612388_133612553_133616813_133616926_133617159_133617327_133618212_133618434_133620154_133620348_133623090_133623194_133623310_133623458_133624051_133624176_133628361_133628472_133628559_133628734_133637875_133638163_133639958_133640171_133643199_133643373_133644019_133644364_133649382_133649634_133649779_133649944_133652462_133652615_133653344_133653525_133655289_133655487_133656675_133656858_133657797_133657942_133659015_133659151_133661043_133661135_133661768
H1_mix_00063216	chr3	-	4261	14	FSM	ENSG00000174640.15	ENST00000310926.11	4067	14	-189	-5	-189	5	multi-exon	FALSE	canonical	3	107	junction_10	20.1068153537212	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTCATGAATTTATGTT	NA	False	NA	-1	True	ATTAAA	-27	NA	134030114	133932695	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_133934831_133935773_133935898_133938428_133938494_133942604_133942769_133945094_133945261_133947255_133947446_133948535_133948701_133948892_133948972_133951207_133951345_133953662_133953762_133954965_133955194_133973662_133973826_133979480_133979619_134029706
H1_mix_00063217	chr3	-	1918	13	FSM	ENSG00000174640.15	ENST00000493729.5	1918	13	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_10	37.7675639787489	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAGAAAGAAAACCCCA	191	False	NA	12	True	NA	NA	NA	134029914	133934610	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_133934831_133935773_133935898_133938428_133938494_133942604_133942769_133945094_133945261_133947255_133947446_133948535_133948701_133948892_133948972_133951207_133951345_133953662_133953762_133973662_133973826_133979480_133979619_134029706
H1_mix_00063218	chr3	-	3061	15	FSM	ENSG00000163785.13	ENST00000623711.4	3049	15	0	-12	0	12	multi-exon	TRUE	canonical	3	333	junction_8	47.5212090136862	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATTTTTCATAATGAAT	3	True	NA	1	True	ATTAAA	-30	NA	134250859	134157120	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_134158265_134159236_134159374_134175608_134175769_134175929_134176040_134177940_134178074_134183001_134183072_134188836_134188924_134191848_134191975_134195081_134195183_134202729_134202875_134207471_134207526_134209694_134209830_134211507_134211608_134222417_134222540_134250422
H1_mix_00063219	chr3	-	3443	15	NNC	ENSG00000163785.13	novel	3049	15	NA	NA	-373	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	120.892282125664	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATTTTTCATAATGAAT	NA	False	NA	1	True	ATTAAA	-30	NA	134251232	134157120	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_134158265_134159236_134159374_134175608_134175769_134175929_134176040_134177940_134178074_134183001_134183072_134188836_134188924_134191848_134191983_134195080_134195183_134202729_134202875_134207471_134207526_134209694_134209830_134211507_134211608_134222417_134222540_134250422
H1_mix_00063220	chr3	-	2075	1	FSM	ENSG00000260633.1	ENST00000568384.1	1946	1	18	-147	18	147	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTCAAAACAAAAAGAAAA	8433	False	NA	NA	False	ATTAAA	-21	NA	134349215	134347140	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_134347100_134349200
H1_mix_00063221	chr3	-	4872	10	FSM	ENSG00000114019.15	ENST00000249883.10	4868	10	0	-4	0	4	multi-exon	FALSE	canonical	3	199	junction_7	32.5989471919676	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGTTCTTGTATCAGAA	-2	True	NA	1	True	ATTAAA	-19	NA	134374447	134355342	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_134357764_134358539_134358720_134359282_134359504_134360105_134360414_134361511_134361808_134365816_134365910_134366282_134366428_134367496_134367804_134370699_134371495_134374341
H1_mix_00063222	chr3	-	4405	10	FSM	ENSG00000114019.15	ENST00000422605.6	4335	10	-70	0	43	0	multi-exon	FALSE	canonical	3	42	junction_2	68.2024944332213	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGTCTTTGCACAGGTG	-12	True	NA	-20	True	ATTAAA	-16	NA	134374517	134355876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_134357764_134358539_134358717_134359282_134359504_134360105_134360414_134361511_134361808_134365816_134365910_134366282_134366428_134367496_134367804_134370699_134371495_134374341
H1_mix_00063223	chr3	-	541	2	FSM	ENSG00000114019.15	ENST00000506107.1	544	2	3	0	3	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGGACCGAGATCCCCGT	-4	True	NA	NA	False	NA	NA	NA	134374915	134371051	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_134371495_134374817
H1_mix_00063224	chr3	-	1172	3	FSM	ENSG00000129055.13	ENST00000354910.10	1170	3	0	-2	0	2	multi-exon	FALSE	canonical	3	327	junction_2	107.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGGTCTTTTTGTTTAC	0	True	NA	-1	True	ACTAAA	-21	NA	134485985	134477703	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_134478716_134482805_134482932_134485951
H1_mix_00063225	chr3	-	1885	3	FSM	ENSG00000129055.13	ENST00000510994.5	1840	3	38	-83	0	83	multi-exon	FALSE	canonical	3	108	junction_2	217	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAACATGATTTTAGCAGC	0	True	NA	80	True	AAAACA	-27	NA	134485985	134477622	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_134478716_134482805_134482932_134485319
H1_mix_00063227	chr3	-	1870	4	FSM	ENSG00000240086.7	ENST00000466206.6	1868	4	2	-4	0	4	multi-exon	FALSE	canonical	2	7	junction_1	6.12825877028341	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATAAGTCTCTGTGTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	135439862	135354791	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_135356322_135379261_135379428_135379780_135379848_135439755
H1_mix_00063228	chr3	-	869	4	FSM	ENSG00000240086.7	ENST00000459861.6	867	4	0	-2	0	2	multi-exon	FALSE	canonical	3	5	junction_1	7.07106781186548	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCTTAAACACTTAAGTC	NA	False	NA	NA	False	AATAAA	-18	NA	135439862	135373792	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_135374322_135379261_135379428_135379780_135379848_135439755
H1_mix_00063229	chr3	-	5186	2	FSM	ENSG00000174579.4	ENST00000309993.3	5186	2	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTGTAGAATACTGAAGAG	-7	True	NA	-15	True	AATAAA	-20	NA	136196335	136148916	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_136152739_136194971
H1_mix_00063233	chr3	-	490	1	FSM	ENSG00000240695.1	ENST00000468074.1	730	1	211	29	211	-29	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGACCACCGAAAGTAAAAAT	2484	False	NA	NA	False	GATAAA	-14	NA	136737018	136736528	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_136736500_136737000
H1_mix_00063234	chr3	-	3304	1	FSM	ENSG00000273486.1	ENST00000609553.1	1684	1	-1645	25	-1645	-25	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACACTAAAATAGTCACCC	NA	False	NA	NA	False	NA	NA	NA	136840666	136837362	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_136837400_136840700
H1_mix_00063235	chr3	-	2043	4	FSM	ENSG00000239213.7	ENST00000474250.5	827	4	18	-1234	0	68	multi-exon	FALSE	canonical	3	13	junction_3	47.6398525979621	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCTATCTCAAAAGAAAAAAA	5	True	NA	NA	False	AAAACA	-43	NA	136862031	136840956	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_136842570_136846527_136846587_136858517_136858604_136861746
H1_mix_00063237	chr3	-	2304	3	FSM	ENSG00000239213.7	ENST00000666310.1	2304	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	52	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACCGTCCCTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	136862272	136841024	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_136842570_136846527_136846587_136861572
H1_mix_00063240	chr3	-	3505	16	FSM	ENSG00000158163.15	ENST00000327532.7	3492	16	0	-13	0	13	multi-exon	FALSE	canonical	3	6	junction_15	7.38466880322559	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTATTTTTGGAGCTTT	12	True	NA	7	True	AATATA	-29	NA	138115608	138061976	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_138062978_138064627_138064768_138067530_138067701_138068150_138068368_138071642_138071836_138077498_138077633_138080566_138080621_138081733_138081765_138084112_138084254_138086960_138087024_138088378_138088508_138092382_138092545_138094861_138094984_138097762_138097848_138103470_138104053_138115327
H1_mix_00063244	chr3	-	569	1	FSM	ENSG00000240668.1	ENST00000489121.1	1440	1	156	715	156	-715	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGTGGTGCTGTCCATG	5509	False	NA	NA	False	NA	NA	NA	138102761	138102192	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_138102200_138102800
H1_mix_00063247	chr3	-	2638	8	FSM	ENSG00000138231.13	ENST00000260803.9	2662	8	0	24	0	-24	multi-exon	TRUE	canonical	3	82	junction_1	10.7228537170258	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGGTAAACGTACAATCT	-5	True	NA	39	True	AATAAA	-18	NA	138174921	138161011	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_138162583_138163348_138163495_138163777_138163859_138167080_138167306_138170106_138170193_138171632_138171714_138173501_138173627_138174598
H1_mix_00063248	chr3	-	2630	17	ISM	ENSG00000114107.9	ENST00000484888.5	1993	18	2268	-664	0	5	3prime_fragment	FALSE	canonical	3	175	junction_16	61.4632766373548	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCCTCAGTGATGCTTGT	2389	False	NA	0	True	AATAAA	-28	NA	138591956	138494338	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_138495077_138498030_138498111_138500109_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138572858_138572985_138591853
H1_mix_00063250	chr3	-	2641	18	FSM	ENSG00000114107.9	ENST00000264982.8	2636	18	0	-5	0	5	multi-exon	FALSE	canonical	3	205	junction_1	55.617514853484	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCCTCAGTGATGCTTGT	-8	True	NA	0	True	AATAAA	-28	NA	138594260	138494338	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_138495077_138498030_138498111_138500109_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138572858_138572933_138591853_138591957_138594197
H1_mix_00063251	chr3	-	2654	18	FSM	ENSG00000114107.9	ENST00000484888.5	1993	18	0	-661	0	2	multi-exon	FALSE	canonical	3	175	junction_16	60.1127544918311	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGTCCTCAGTGATGCT	28	True	NA	-3	True	AATAAA	-25	NA	138594224	138494341	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_138495077_138498030_138498111_138500109_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138572858_138572985_138591853_138591957_138594197
H1_mix_00063252	chr3	-	2378	18	NIC	ENSG00000114107.9	novel	1993	18	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	21	junction_17	92.6948709495084	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATCAAATCATTTTTACT	216	False	NA	NA	False	ATTAAA	-20	NA	138594129	138495011	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_138495077_138498030_138498111_138500109_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138572858_138572985_138591853_138591957_138593708
H1_mix_00063253	chr3	-	2258	17	NIC	ENSG00000114107.9	novel	2037	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_1	84.0187618556118	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTGGTAACACTTATTT	2389	False	NA	-23	True	AATAAA	-16	NA	138591956	138496909	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_138497328_138498030_138498111_138500109_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138572858_138572933_138591853
H1_mix_00063254	chr3	-	2184	16	NIC	ENSG00000114107.9	novel	2037	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_15	106.386005763081	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTGGTAACACTTATTT	2389	False	NA	-23	True	AATAAA	-16	NA	138591956	138496909	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_138497328_138498030_138498111_138500109_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138591853
H1_mix_00063255	chr3	-	2489	18	NIC	ENSG00000114107.9	novel	2037	16	NA	NA	0	152	combination_of_known_junctions	FALSE	canonical	3	47	junction_1	84.9557181621279	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAACATTAACATTGGGAA	28	True	NA	NA	False	NA	NA	NA	138594224	138496757	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_138497328_138498030_138498111_138500109_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138572858_138572985_138591853_138591957_138594197
H1_mix_00063256	chr3	-	2037	16	FSM	ENSG00000114107.9	ENST00000481834.5	2037	16	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_14	48.0595001592355	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACCTTCCCTGTTTGGAA	4	True	NA	-9	True	ATTAAA	-16	NA	138594248	138499883	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138572858_138572933_138591853_138591957_138594197
H1_mix_00063257	chr3	-	1878	14	NIC	ENSG00000114107.9	novel	2037	16	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_9	122.986312799818	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACCTTCCCTGTTTGGAA	12	False	NA	-9	True	ATTAAA	-16	NA	138594333	138499883	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138570317_138570499_138571033_138571158_138571265_138571357_138591853_138591957_138594197
H1_mix_00063259	chr3	-	1812	6	ISM	ENSG00000114107.9	ENST00000478673.5	974	9	2374	4526	76	886	internal_fragment	FALSE	canonical	3	208	junction_5	69.2138714420744	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGTTAAAACTATAGATTT	2465	False	NA	-15	True	AATAAA	-30	NA	138591880	138536032	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138572858_138572933_138591853
H1_mix_00063260	chr3	-	1054	6	FSM	ENSG00000114107.9	ENST00000464035.5	1054	6	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_5	81.2664752527141	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTCTCAAAATAACTGAT	2389	False	NA	-13	True	AATAAA	-17	NA	138591956	138536918	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138572858_138572985_138591853
H1_mix_00063261	chr3	-	1044	7	NIC	ENSG00000114107.9	novel	974	9	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	1	6	junction_4	137.281543632865	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTCTCAAAATAACTGAT	10	True	NA	-13	True	AATAAA	-17	NA	138594242	138536918	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_138537348_138570317_138570499_138571033_138571158_138571265_138571354_138572858_138572933_138591853_138591957_138594197
H1_mix_00063262	chr3	-	1189	7	ISM	ENSG00000114107.9	ENST00000484888.5	1993	18	-108	41916	7	0	5prime_fragment	FALSE	canonical	3	175	junction_5	74.9905549608305	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTCTCAAAATAACTGAT	13	False	NA	-13	True	AATAAA	-17	NA	138594332	138536918	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138572858_138572985_138591853_138591957_138594197
H1_mix_00063264	chr3	-	6259	24	FSM	ENSG00000051382.9	ENST00000674063.1	6259	24	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_22	23.409238316599	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTTGTGCTATCAAATA	25	False	138834953	NA	False	ATTAAA	-17	NA	138834928	138652697	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_138655527_138656141_138656275_138657689_138657836_138663905_138664030_138665035_138665204_138681966_138682046_138683677_138683788_138684624_138684804_138688874_138688975_138690999_138691144_138694785_138694908_138698906_138699096_138704442_138704494_138707158_138707290_138712207_138712305_138714467_138714720_138733360_138733439_138734633_138734805_138737706_138737887_138742557_138742782_138755753_138755980_138759172_138759360_138796462_138796568_138834694
H1_mix_00063265	chr3	-	4658	23	FSM	ENSG00000051382.9	ENST00000477593.5	4658	23	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_22	46.7893335658587	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAGCCTCTTCTTTATGG	201	False	NA	-3	True	AATAAA	-33	NA	138834752	138654017	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_138655527_138656141_138656275_138657689_138657836_138663905_138664030_138665035_138665204_138681966_138682046_138683677_138683788_138684624_138684804_138688874_138688975_138690999_138691144_138694785_138694908_138698906_138699096_138704442_138704494_138707158_138707290_138712207_138712305_138714467_138714720_138733360_138733439_138734633_138734805_138737706_138737887_138742557_138742782_138755753_138755980_138759172_138759360_138834694
H1_mix_00063268	chr3	-	2882	1	FSM	ENSG00000183770.7	ENST00000648323.1	2914	1	32	0	32	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGACTTCTTTATTTCTG	5	True	NA	1	True	AATAAA	-21	NA	138947105	138944223	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_138944200_138947100
H1_mix_00063270	chr3	-	3495	23	FSM	ENSG00000184432.11	ENST00000514508.2	3495	23	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_21	243.057372576181	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTTTCTTGACCTCATT	-16	True	NA	-5	True	NA	NA	NA	139389670	139357405	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_139357959_139358199_139358272_139358743_139358813_139358997_139359179_139359269_139359363_139361080_139361296_139362406_139362518_139366567_139366776_139367014_139367146_139368144_139368289_139369260_139369368_139369455_139369545_139371722_139371834_139373212_139373413_139373665_139373809_139374488_139374589_139375467_139375615_139378040_139378190_139379046_139379174_139379379_139379467_139383297_139383436_139385003_139385201_139389547
H1_mix_00063271	chr3	-	3373	21	FSM	ENSG00000184432.11	ENST00000512309.2	3373	21	0	0	0	0	multi-exon	FALSE	canonical	3	848	junction_8	60.9397243183787	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTCATACTATTAGAC	NA	False	NA	-17	True	ACTAAA	-18	NA	139389736	139357637	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_139358272_139358743_139358813_139358997_139359179_139359269_139359363_139361080_139361296_139362406_139362518_139366567_139366776_139367014_139367146_139368144_139368289_139369260_139369368_139369455_139369545_139371722_139371834_139373212_139373413_139373665_139373809_139374488_139374589_139375467_139375615_139378040_139378190_139379046_139379174_139379379_139379467_139383297_139383436_139389547
H1_mix_00063276	chr3	-	900	4	FSM	ENSG00000114115.10	ENST00000232219.6	898	4	0	-2	0	2	multi-exon	FALSE	canonical	3	216	junction_1	16.9377946878833	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGGGAAGTTTCACTGC	160	False	NA	-8	True	AATAAA	-24	NA	139539829	139517431	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_139517681_139518420_139518523_139538780_139538960_139539459
H1_mix_00063277	chr3	-	667	3	FSM	ENSG00000163864.17	ENST00000511003.1	688	3	20	1	-12	-1	multi-exon	FALSE	canonical	2	8	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCATTCTGCCTGAAGC	-5	True	NA	-6	True	AATAAA	-18	NA	139677984	139634360	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_139634648_139637962_139638063_139677704
H1_mix_00063278	chr3	-	9879	13	FSM	ENSG00000114126.18	ENST00000489671.6	9880	13	2	-1	2	1	multi-exon	FALSE	canonical	3	103	junction_10	195.982283779824	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTCTCATTACTAGTGG	-9	True	NA	-12	True	AATAAA	-15	NA	142149542	141944426	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974192_141978519_141978683_141993537_141993586_141995019_141995142_142005440_142005545_142093060_142093128_142101734_142101842_142149182
H1_mix_00063279	chr3	-	6092	11	NIC	ENSG00000114126.18	novel	2360	11	NA	NA	0	-3264	combination_of_known_junctions	FALSE	canonical	3	369	junction_6	81.52398420097	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTCAAAGCAAAGTTAGCT	581	False	NA	NA	False	NA	NA	NA	142028597	141947698	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974192_141978519_141978683_141993537_141993586_141995019_141995142_142005440_142005545_142028578
H1_mix_00063280	chr3	-	2334	11	FSM	ENSG00000114126.18	ENST00000486111.5	2360	11	26	0	7	0	multi-exon	FALSE	canonical	3	200	junction_6	123.58644747706	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTGTACATGTCACCT	539	False	NA	-9	True	AAGAAA	-30	NA	142028639	141951501	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974195_141978519_141978683_141993537_141993586_141995019_141995142_142005440_142005545_142028578
H1_mix_00063281	chr3	-	1435	10	FSM	ENSG00000114126.18	ENST00000495310.5	1442	10	7	0	7	0	multi-exon	FALSE	canonical	3	20	junction_8	187.931298190339	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGAGGAGATAGTGGG	539	False	NA	NA	False	AAGAAA	-6	NA	142028639	141952275	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974192_141978519_141978683_141993537_141993586_142005440_142005545_142028578
H1_mix_00063282	chr3	-	1741	13	NIC	ENSG00000114126.18	novel	1853	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	103	junction_10	207.169599737885	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTCAATATGTGATGCTC	12	True	NA	-38	True	AATAAA	-17	NA	142149470	141952495	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974195_141978519_141978683_141993537_141993586_141995019_141995142_142005440_142005545_142093060_142093128_142101734_142101842_142149182
H1_mix_00063286	chr3	-	10888	17	FSM	ENSG00000175066.16	ENST00000480757.5	4479	17	-27	-6382	0	0	multi-exon	FALSE	canonical	2	11	junction_7	6.45053292372033	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCTGTTATTTGCTTTG	14	True	NA	-2	True	ATTAAA	-18	NA	142225575	142157526	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_142165771_142170324_142170459_142171418_142171479_142172352_142172457_142177481_142177577_142181460_142181566_142182922_142183050_142184710_142185794_142185928_142185990_142186193_142186268_142186451_142186514_142187703_142187780_142198801_142198934_142204694_142204789_142213525_142213602_142215598_142215693_142225308
H1_mix_00063290	chr3	-	10079	41	FSM	ENSG00000114127.11	ENST00000392981.7	10079	41	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_26	5.49494085500472	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTGTTTGTTCTTTTAT	0	True	NA	-2	True	ATTAAA	-19	NA	142448037	142306609	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_142311814_142312597_142312759_142318591_142318695_142318789_142318904_142329433_142329616_142332374_142332535_142332966_142333090_142335447_142335510_142347233_142347343_142355400_142355497_142356911_142357120_142359861_142359932_142365046_142365180_142365309_142365367_142370484_142370621_142371238_142371329_142375797_142375945_142376478_142376595_142380081_142380181_142383299_142383414_142384522_142384686_142397328_142397461_142400443_142400548_142403673_142403773_142403868_142403990_142404906_142405077_142412543_142412664_142414134_142414292_142417139_142417230_142418503_142418610_142418814_142418882_142421015_142421154_142421475_142421544_142422581_142422751_142422834_142422923_142423559_142423643_142425221_142425333_142425428_142425539_142426743_142426842_142432660_142432894_142447869
H1_mix_00063291	chr3	-	2083	12	FSM	ENSG00000114127.11	ENST00000463916.5	2075	12	0	-8	0	8	multi-exon	FALSE	canonical	3	22	junction_1	2.94859540731397	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTAATTTCTAAGTGAAT	4	True	NA	NA	False	ATTAAA	-26	NA	142448010	142417832	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_142418610_142418814_142418882_142421015_142421154_142421475_142421544_142422581_142422751_142422834_142422923_142423559_142423643_142425221_142425333_142425428_142425539_142426743_142426842_142432660_142432894_142447869
H1_mix_00063292	chr3	-	4097	12	FSM	ENSG00000175054.16	ENST00000654170.1	2961	12	-724	-412	-724	173	multi-exon	FALSE	canonical	3	55	junction_9	16.4944268073334	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAATGCAGAATCCAGTGG	NA	False	NA	NA	False	AATAAA	-39	NA	142486927	142448833	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_142449603_142453127_142453234_142457603_142457756_142458957_142459112_142459226_142459384_142461939_142462091_142465096_142465241_142466323_142466534_142467933_142468069_142469336_142469570_142470085_142470184_142485139
H1_mix_00063293	chr3	-	8163	47	FSM	ENSG00000175054.16	ENST00000350721.9	8158	47	0	-5	0	0	multi-exon	FALSE	canonical	2	32	junction_42	17.9070272716854	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCATTATAATTGGAGAAAT	25	True	NA	81	True	AATAAA	-22	NA	142578733	142449229	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_142449603_142453127_142453234_142457603_142457756_142458957_142459112_142459226_142459384_142461939_142462091_142465096_142465241_142466323_142466534_142467933_142468069_142469336_142469570_142470085_142470184_142485139_142485283_142493131_142493312_142496360_142496521_142497012_142497193_142498596_142498775_142499626_142499719_142503361_142503454_142505138_142505304_142507930_142508110_142512259_142512471_142513500_142513639_142515394_142515516_142519668_142519785_142522727_142522842_142523992_142524200_142535079_142535206_142536107_142536202_142538481_142538626_142540903_142541035_142542664_142542758_142547724_142547911_142549478_142549674_142550131_142550303_142553226_142553399_142553639_142553741_142553824_142554016_142555876_142556140_142556382_142556576_142558623_142558777_142559250_142559442_142560262_142560455_142561242_142561422_142562231_142563110_142566120_142566262_142568062_142568155_142578645
H1_mix_00063299	chr3	-	2397	2	NNC	ENSG00000188582.10	novel	1824	3	NA	NA	-328	-6662	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGCAAAGTCCAAATGAC	0	True	NA	NA	False	AATAAA	-10	NA	142964002	142961246	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_142963493_142963851
H1_mix_00063300	chr3	-	565	1	FSM	ENSG00000268129.1	ENST00000597953.1	561	1	0	-4	0	4	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTCATTTTTAATCACA	-15	True	NA	4	True	TTTAAA	-24	NA	143001467	143000902	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_143000900_143001500
H1_mix_00063301	chr3	-	1130	1	FSM	ENSG00000243759.1	ENST00000460666.1	1107	1	22	-45	22	45	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGTTAAAGAAATTGACAT	NA	False	NA	NA	False	AATAAA	-24	NA	143518207	143517077	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_143517100_143518200
H1_mix_00063304	chr3	-	3669	19	FSM	ENSG00000152952.12	ENST00000360060.7	3665	19	0	-4	0	0	multi-exon	FALSE	canonical	3	149	junction_6	32.9734273860065	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTGTTCTATTATTG	2552	False	NA	-16	True	AATAAA	-14	NA	146161167	146069439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_146070873_146071041_146071168_146071276_146071424_146072560_146072666_146073286_146073353_146076781_146076896_146079115_146079258_146081737_146081864_146085168_146085274_146086786_146086909_146088585_146088712_146091799_146091902_146102754_146102853_146104278_146104343_146106531_146106645_146110284_146110449_146121111_146121249_146124137_146124230_146160880
H1_mix_00063305	chr3	-	3749	20	FSM	ENSG00000152952.12	ENST00000282903.10	3749	20	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_7	58.5808625023868	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTGTTCTATTATTG	-1	True	NA	-16	True	AATAAA	-14	NA	146161184	146069439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_146070873_146071041_146071168_146071276_146071424_146072560_146072666_146073286_146073353_146076781_146076896_146077861_146077925_146079115_146079258_146081737_146081864_146085168_146085274_146086786_146086909_146088585_146088712_146091799_146091902_146102754_146102853_146104278_146104343_146106531_146106645_146110284_146110449_146121111_146121249_146124137_146124230_146160880
H1_mix_00063307	chr3	-	3233	9	FSM	ENSG00000114698.15	ENST00000354952.7	3233	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	3.34477204006491	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTTTATTTTTTGACT	-14	True	NA	56	True	AATAAA	-23	NA	146251105	146192334	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_146194456_146195123_146195283_146196631_146196794_146199812_146200040_146201034_146201078_146206525_146206762_146220814_146220926_146222064_146222093_146250959
H1_mix_00063309	chr3	-	675	4	NNC	ENSG00000163746.12	novel	574	4	NA	NA	48344	55026	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1694.72757561667	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTCCTTGGTTTCCATAG	NA	False	NA	NA	False	NA	NA	NA	146411730	146336394	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_146336424_146391416_146391563_146395759_146395922_146411392
H1_mix_00063310	chr3	-	703	3	NNC	ENSG00000163746.12	novel	574	4	NA	NA	48344	61	at_least_one_novel_splicesite	FALSE	canonical	3	3127	junction_1	400.5	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTGTTTAGTTTAGGA	NA	False	NA	48	True	AATAAA	-30	NA	146411730	146391359	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_146391563_146395759_146395922_146411392
H1_mix_00063311	chr3	-	865	4	NNC	ENSG00000241358.1	novel	705	5	NA	NA	4882	0	at_least_one_novel_splicesite	FALSE	canonical	3	160	junction_3	1343.81769596921	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCATTGTGTTTAGTTTA	NA	False	NA	45	True	AATAAA	-27	NA	146411695	146391362	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_146391563_146395759_146395922_146401359_146401560_146411392
H1_mix_00063312	chr3	-	2096	9	FSM	ENSG00000188313.13	ENST00000342435.9	1976	9	-120	0	0	0	multi-exon	FALSE	canonical	3	401	junction_5	39.6579121992069	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGATTTTTGTTTTTAA	4	True	NA	-23	True	AATAAA	-18	NA	146544727	146515179	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_146516102_146517005_146517168_146521543_146521706_146521832_146522054_146525604_146525648_146528613_146528832_146533469_146533551_146536539_146536566_146544466
H1_mix_00063313	chr3	-	1458	8	FSM	ENSG00000188313.13	ENST00000487389.5	1443	8	0	-15	0	0	multi-exon	FALSE	canonical	3	35	junction_7	141.232186884736	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAACTGCTTTGAATTAT	-6	True	NA	-21	True	AAAAAG	-40	NA	146544737	146515801	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_146516102_146517005_146517168_146521543_146521706_146521832_146522054_146525604_146525648_146528613_146528832_146533469_146533551_146544466
H1_mix_00063316	chr3	-	1261	4	FSM	ENSG00000188313.13	ENST00000469266.1	1257	4	0	-4	0	4	multi-exon	FALSE	canonical	3	428	junction_1	44.2743969153982	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTTGCACTAAATTATA	4	True	NA	0	True	AATAAA	-19	NA	146544727	146527938	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_146528832_146533469_146533551_146536539_146536566_146544466
H1_mix_00063318	chr3	-	5352	25	FSM	ENSG00000071794.16	ENST00000465259.5	5306	25	18	-64	0	64	multi-exon	FALSE	canonical	3	144	junction_13	80.1258450293454	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTCTATGCAAGTGTTAC	19	True	NA	-7	True	AATAAA	-19	NA	149086504	149030062	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_149032373_149034917_149034999_149039048_149039230_149039580_149039694_149040030_149040157_149041489_149041669_149042165_149042291_149046079_149046260_149048027_149048164_149048862_149049002_149050231_149050376_149055302_149055401_149059717_149059805_149060642_149060688_149060778_149060859_149063430_149063525_149064790_149064867_149068239_149068336_149071251_149071444_149071582_149071658_149073224_149073323_149074214_149074349_149075880_149076048_149084681_149084890_149086316
H1_mix_00063321	chr3	-	4480	26	NIC	ENSG00000071794.16	novel	3896	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	144	junction_14	97.3056545119553	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTACCTTCCTCGGTGCCA	-10	True	NA	-23	True	AATAAA	-14	NA	149086533	149030126	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_149031364_149032200_149032373_149034917_149034999_149039048_149039230_149039580_149039694_149040030_149040157_149041489_149041669_149042165_149042291_149046079_149046260_149048027_149048164_149048862_149049002_149050231_149050376_149055302_149055401_149059717_149059805_149060642_149060688_149060778_149060859_149063430_149063525_149064790_149064867_149068239_149068336_149071251_149071444_149071582_149071658_149073224_149073323_149074214_149074349_149075880_149076048_149084681_149084890_149086316
H1_mix_00063322	chr3	-	5320	25	FSM	ENSG00000071794.16	ENST00000310053.10	5320	25	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_13	62.675074236538	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTACCTTCCTCGGTGCCA	-10	True	NA	-23	True	AATAAA	-14	NA	149086533	149030126	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_149032373_149034917_149034999_149039048_149039230_149039580_149039694_149040030_149040157_149041489_149041669_149042165_149042291_149046079_149046260_149048027_149048164_149048862_149049002_149050231_149050376_149055302_149055401_149059717_149059808_149060642_149060688_149060778_149060859_149063430_149063525_149064790_149064867_149068239_149068336_149071251_149071444_149071582_149071658_149073224_149073323_149074214_149074349_149075880_149076048_149084681_149084890_149086316
H1_mix_00063327	chr3	-	512	3	FSM	ENSG00000047457.14	ENST00000497902.5	542	3	0	30	0	-30	multi-exon	FALSE	canonical	3	4	junction_1	0.5	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTTTTCAGAGAAGTAAG	392	False	NA	NA	False	NA	NA	NA	149188096	149185192	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_149185447_149186519_149186733_149188051
H1_mix_00063329	chr3	-	906	5	FSM	ENSG00000163762.7	ENST00000470080.5	907	5	1	0	1	0	multi-exon	FALSE	canonical	3	18	junction_1	6.04152298679729	195	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGAAATACTTCTGCCC	192	False	NA	NA	False	NA	NA	NA	149333481	149321276	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_149321493_149322255_149322437_149324879_149325023_149330329_149330420_149333205
H1_mix_00063330	chr3	-	1555	5	FSM	ENSG00000169908.12	ENST00000305366.8	1555	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	0.82915619758885	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTGTTGTTTAGTTTC	-2	True	NA	0	True	AATAAA	-14	NA	149377649	149369021	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_149369881_149371686_149371868_149375442_149375589_149375679_149375770_149377370
H1_mix_00063331	chr3	-	5043	7	FSM	ENSG00000018408.15	ENST00000360632.8	5037	7	0	-6	0	6	multi-exon	FALSE	canonical	3	54	junction_4	9.3392838174146	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGACTTTTCATTATT	-3	True	NA	-14	True	AATAAA	-23	NA	149658025	149517228	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_149520990_149526012_149526126_149527835_149527970_149542334_149542538_149572863_149573001_149656875_149657310_149657764
H1_mix_00063334	chr3	-	207	1	ISM	ENSG00000018408.15	ENST00000474080.1	2143	7	34635	268	1194	-268	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCGTATAACATATGCACAA	NA	False	NA	NA	False	NA	NA	NA	149702079	149701872	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_149701900_149702100
H1_mix_00063335	chr3	-	3694	5	FSM	ENSG00000114744.9	ENST00000473414.6	3694	5	0	0	0	0	multi-exon	FALSE	canonical	3	652	junction_1	41.5030119388943	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGTAGACTGAGGATCT	-17	True	NA	-7	True	AATAAA	-21	NA	149752489	149738471	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_149741719_149750677_149750852_149751402_149751486_149752209_149752288_149752377
H1_mix_00063336	chr3	-	5146	6	FSM	ENSG00000114744.9	ENST00000491617.5	885	6	-40	-4221	-17	1303	multi-exon	FALSE	canonical	3	33	junction_2	345.206952421298	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAGTGAGAGACTGTGTT	NA	False	NA	-10	True	NA	NA	NA	149752512	149737168	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_149741719_149750256_149750383_149750677_149750852_149751402_149751486_149752209_149752288_149752377
H1_mix_00063339	chr3	-	1792	3	FSM	ENSG00000070087.15	ENST00000452853.6	1780	3	0	-12	0	12	multi-exon	FALSE	canonical	3	914	junction_1	104	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTGTTTATATACATTGT	845	False	NA	9	True	AATAAA	-28	NA	149970950	149964891	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_149966265_149968357_149968551_149970724
H1_mix_00063340	chr3	-	2273	3	FSM	ENSG00000070087.15	ENST00000239940.12	2047	3	-214	-12	104	12	multi-exon	FALSE	canonical	3	380	junction_1	371	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTGTTTATATACATTGT	686	False	NA	9	True	AATAAA	-28	NA	149971109	149964891	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_149966587_149968357_149968551_149970724
H1_mix_00063347	chr3	-	701	2	FSM	ENSG00000243069.9	ENST00000659466.1	2136	2	1	1434	1	-327	multi-exon	FALSE	canonical	0	0	junction_1	0	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCGACTGACAAATGGAG	5	True	NA	NA	False	AATAAA	-17	NA	154121327	154119363	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_154119809_154121071
H1_mix_00063348	chr3	-	7449	25	FSM	ENSG00000174953.14	ENST00000496811.6	6723	25	0	-726	0	726	multi-exon	FALSE	canonical	3	270	junction_22	58.9016217235711	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCTTTGTGTGGTTATA	-14	True	NA	-1	True	AATAAA	-22	NA	154324487	154271819	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_154276357_154276746_154276900_154277597_154277719_154280578_154280670_154280762_154280863_154283187_154283272_154284582_154284670_154284813_154284988_154288865_154288965_154289708_154289827_154292550_154292695_154293747_154293813_154295283_154295340_154299837_154299926_154300593_154300697_154300986_154301128_154303328_154303411_154304805_154304973_154305093_154305169_154306215_154306296_154309652_154309824_154311635_154311675_154315045_154315281_154316038_154316164_154324173
H1_mix_00063349	chr3	-	719	3	FSM	ENSG00000174953.14	ENST00000495598.1	719	3	0	0	0	0	multi-exon	FALSE	canonical	3	397	junction_1	84.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCATGACTTGATGTTATA	NA	False	NA	NA	False	AGTAAA	-9	NA	154277835	154276028	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_154276357_154276746_154276900_154277597
H1_mix_00063350	chr3	-	644	2	FSM	ENSG00000174953.14	ENST00000477549.1	644	2	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTGCAGTGTGAATTT	NA	False	NA	NA	False	NA	NA	NA	154277894	154276552	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_154276900_154277597
H1_mix_00063351	chr3	-	2306	3	FSM	ENSG00000174953.14	ENST00000460695.1	2306	3	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_1	19	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAACTT	NA	False	NA	NA	False	NA	NA	NA	154283218	154278494	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_154280670_154280762_154280863_154283187
H1_mix_00063355	chr3	-	832	5	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	188.798172660648	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAGAGTGAAACAGAATAGC	-4	False	NA	NA	False	NA	NA	NA	155280499	155255907	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr3_-_155255931_155260381_155260624_155265037_155265159_155278366_155278560_155280246
H1_mix_00063356	chr3	-	817	4	Intergenic	novelGene_951	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	104	junction_2	180.032095903913	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAACTGGCATTTAATGAT	2	True	NA	-3	True	AATAAA	-39	NA	155280493	155260363	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_155260624_155265037_155265155_155278366_155278560_155280246
H1_mix_00063357	chr3	-	700	3	Intergenic	novelGene_952	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	70	junction_1	231	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAACTGGCATTTAATGAT	2	True	NA	-3	True	AATAAA	-39	NA	155280493	155260363	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_155260624_155278366_155278560_155280246
H1_mix_00063360	chr3	-	6410	23	NNC	ENSG00000114805.18	novel	6417	23	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	36	junction_1	19.3845917340091	75	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGAACTTTTTTTACA	-11	True	NA	-6	True	ATTAAA	-16	NA	155745067	155479880	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_155483049_155485355_155485711_155488027_155488108_155488659_155488807_155490783_155490869_155492728_155492854_155494140_155494249_155494337_155494518_155497319_155497418_155500702_155500795_155504554_155504627_155514722_155514885_155523896_155524005_155549786_155549959_155554075_155554197_155564914_155565119_155568230_155568325_155583471_155583643_155586064_155586193_155593938_155594185_155596231_155596379_155704145_155704265_155744839
H1_mix_00063361	chr3	-	7564	23	NNC	ENSG00000114805.18	novel	6417	23	NA	NA	0	1147	at_least_one_novel_splicesite	TRUE	non_canonical	3	52	junction_1	17.9409614896625	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACTGAGGCTCAGAGTA	-15	True	NA	NA	False	ATTAAA	-22	NA	155745071	155478733	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_155483052_155485355_155485711_155488027_155488108_155488659_155488807_155490783_155490869_155492728_155492854_155494140_155494249_155494337_155494518_155497319_155497418_155500702_155500795_155504554_155504627_155514722_155514885_155523896_155524005_155549786_155549959_155554075_155554197_155564914_155565119_155568230_155568325_155583471_155583643_155586064_155586193_155593938_155594185_155596231_155596379_155704145_155704265_155744839
H1_mix_00063363	chr3	-	1926	6	FSM	ENSG00000174928.16	ENST00000482061.6	1926	6	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_5	29.9599732977184	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCAAAGTAGCTTTTTTC	12	True	NA	-11	True	AATAAA	-19	NA	155806266	155762616	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_155763919_155767508_155767670_155775700_155775849_155802531_155802592_155805596_155805724_155806138
H1_mix_00063364	chr3	-	1818	5	FSM	ENSG00000174928.16	ENST00000340171.7	1811	5	0	-7	0	7	multi-exon	FALSE	canonical	3	56	junction_3	8.6421930087218	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGCTTTTTTCTCCTAAT	0	True	NA	-4	True	AATAAA	-26	NA	155806278	155762609	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_155763919_155767508_155767670_155775700_155775849_155802531_155802592_155806138
H1_mix_00063365	chr3	-	9266	6	FSM	ENSG00000169359.16	ENST00000643144.2	9266	6	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_5	21.1035542030247	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTGTTTTCATTTTTAT	-16	True	NA	NA	False	AATAAA	-13	NA	155854427	155821023	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_155828378_155829687_155829904_155833467_155833586_155833856_155834042_155842431_155842620_155853222
H1_mix_00063366	chr3	-	3565	5	FSM	ENSG00000169359.16	ENST00000468581.2	3558	5	0	-7	0	0	multi-exon	FALSE	canonical	1	1	junction_4	59.8806103843306	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTACATATGAAATGTGT	-5	True	NA	-12	True	AATAAA	-18	NA	155854416	155826525	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_155828378_155829687_155829904_155833467_155833586_155833856_155834042_155853222
H1_mix_00063369	chr3	-	1039	5	FSM	ENSG00000114850.7	ENST00000467789.5	1039	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	514.412954249793	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTACAACTTCTTTTGA	-1	True	NA	96	True	NA	NA	NA	156555149	156542820	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_156543270_156544307_156544440_156548865_156549004_156553654_156553782_156554956
H1_mix_00063370	chr3	-	801	5	FSM	ENSG00000114850.7	ENST00000265044.7	4236	5	0	3435	0	16	multi-exon	FALSE	canonical	3	1009	junction_2	101.819693576439	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTTTATTAAAAGGAAAAAAA	-9	True	NA	7	True	ATTAAA	-33	NA	156555117	156542987	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_156543270_156544307_156544440_156548904_156549004_156553654_156553782_156554956
H1_mix_00063371	chr3	-	6074	5	FSM	ENSG00000114850.7	ENST00000476217.5	807	5	-49	-5218	-25	1767	multi-exon	FALSE	canonical	3	16	junction_1	496.747106181808	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAATTAAACAATGAACATT	NA	False	NA	NA	False	TATAAA	-10	NA	156555174	156537785	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_156543270_156544293_156544440_156548904_156549004_156553654_156553782_156554956
H1_mix_00063372	chr3	-	873	4	FSM	ENSG00000114850.7	ENST00000467733.1	873	4	0	0	0	0	multi-exon	FALSE	canonical	3	1009	junction_1	115.557585452256	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATGGCCAATGCAGTTA	-9	True	NA	NA	False	NA	NA	NA	156555117	156543953	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_156544440_156548904_156549004_156553654_156553782_156554956
H1_mix_00063373	chr3	-	509	2	FSM	ENSG00000243926.3	ENST00000664429.2	512	2	0	3	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTCTTCTAGGCTCTACC	NA	False	NA	NA	False	AATAAA	-17	NA	156674446	156671861	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_156672131_156674206
H1_mix_00063375	chr3	-	536	3	FSM	ENSG00000240875.6	ENST00000654528.1	533	3	0	-3	0	3	multi-exon	FALSE	canonical	1	1	junction_1	2.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAGTATGAGTAATTGTA	NA	False	NA	NA	False	AATAAA	-15	NA	156751655	156747350	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_156747564_156751094_156751184_156751421
H1_mix_00063376	chr3	-	1182	1	FSM	ENSG00000230457.3	ENST00000473864.1	1182	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGGGTCCCATCTCCCCA	6272	False	NA	NA	False	AAGAAA	-15	NA	156810732	156809550	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_156809600_156810700
H1_mix_00063377	chr3	-	2322	11	FSM	ENSG00000163660.12	ENST00000295926.8	2322	11	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_8	39.041132155715	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTTGCTTTTGAATGG	-15	True	NA	NA	False	ATTAAA	-29	NA	157160147	157147552	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_157148590_157149286_157149386_157149484_157149597_157149835_157149978_157150064_157150170_157150281_157150382_157152176_157152242_157153035_157153157_157158865_157158976_157159404_157159480_157159791
H1_mix_00063378	chr3	-	2494	12	NIC	ENSG00000163660.12	novel	2457	13	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	3	17	junction_8	64.646527777747	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAAACCTGATTTGCTTT	-3	True	NA	95	True	ATTAAA	-22	NA	157160178	157147559	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_157148590_157149286_157149386_157149484_157149597_157149835_157149978_157150064_157150170_157150281_157150382_157152176_157152242_157153035_157153157_157156935_157157084_157158865_157158976_157159404_157159480_157159791
H1_mix_00063379	chr3	-	2338	12	NIC	ENSG00000163660.12	novel	2362	13	NA	NA	1	-44	combination_of_known_junctions	FALSE	canonical	3	51	junction_8	57.3154242001197	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATGTGACATTAAATGTT	-2	True	NA	58	True	AGTAAA	-14	NA	157160134	157147596	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_157148590_157149286_157149386_157149484_157149597_157149835_157149978_157150064_157150170_157150281_157150382_157152176_157152242_157153035_157153157_157157010_157157084_157158865_157158976_157159404_157159480_157159791
H1_mix_00063380	chr3	-	4800	6	FSM	ENSG00000163660.12	ENST00000474539.5	4799	6	0	-1	0	0	multi-exon	FALSE	canonical	3	205	junction_4	10.2097992144802	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTCAAATACCTTATTTA	6933	False	NA	-6	True	AATAAA	-25	NA	157153828	157147794	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_157148590_157149286_157149386_157149484_157149597_157149835_157149978_157150064_157150170_157150281
H1_mix_00063384	chr3	-	1301	5	NIC	ENSG00000197415.12	novel	992	4	NA	NA	3	50	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	17.1664644001029	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGCCCACAGTTTACTG	1	True	NA	NA	False	AATAAA	-22	NA	157499551	157459468	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_157459927_157460180_157460356_157470313_157470530_157495211_157495507_157499394
H1_mix_00063387	chr3	-	3983	20	NNC	ENSG00000068885.15	novel	3999	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	27.2146489801646	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCTCATATCCTAGAATT	11	True	NA	-9	True	AATAAA	-33	NA	160399209	160256985	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_160258636_160268412_160268537_160277305_160277479_160277580_160277671_160279192_160279365_160280666_160280815_160282477_160282614_160285803_160285869_160300882_160301047_160303914_160303990_160307662_160307782_160319759_160319940_160356012_160356151_160357488_160357579_160366042_160366153_160375811_160375881_160377429_160377541_160381502_160381723_160384561_160384647_160399145
H1_mix_00063389	chr3	-	4873	21	FSM	ENSG00000068885.15	ENST00000496589.5	3073	21	-607	-1193	0	-1	multi-exon	FALSE	canonical	3	26	junction_19	24.9651757454259	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTCTCATATCCTAGAAT	NA	False	NA	-10	True	AATAAA	-32	NA	160399880	160256986	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_160258636_160268412_160268537_160277305_160277479_160277580_160277671_160279192_160279365_160280666_160280815_160282477_160282614_160285803_160285869_160300882_160301047_160303914_160303990_160307662_160307782_160319759_160319940_160356012_160356151_160357488_160357579_160366042_160366153_160375811_160375881_160377429_160377541_160381502_160381719_160383436_160383505_160384405_160384647_160399145
H1_mix_00063391	chr3	-	4473	3	FSM	ENSG00000213186.8	ENST00000543469.1	4615	3	142	0	142	0	multi-exon	FALSE	canonical	1	2	junction_1	61	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATTTGGTAATTTTCCT	1037	False	NA	NA	False	NA	NA	NA	160448795	160432444	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_160435893_160438231_160439187_160448725
H1_mix_00063392	chr3	-	3882	3	FSM	ENSG00000213186.8	ENST00000309784.9	3824	3	-58	0	-58	0	multi-exon	FALSE	canonical	3	102	junction_2	11	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCACTGTCTTAATGAGA	NA	False	NA	-1	True	AATAAA	-18	NA	160449844	160435502	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_160439187_160448725_160448796_160449716
H1_mix_00063393	chr3	-	860	3	FSM	ENSG00000213186.8	ENST00000479460.5	860	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	59	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGGCGATAAGGAAGCTG	-1	True	NA	34	True	NA	NA	NA	160449725	160438650	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_160439187_160448725_160448796_160449471
H1_mix_00063395	chr3	-	8970	17	FSM	ENSG00000186432.10	ENST00000334256.9	8952	17	0	-18	0	18	multi-exon	FALSE	canonical	3	355	junction_11	34.8146318916343	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATTGTAGTGACTACCTC	-2	True	NA	2	True	AATAAA	-34	NA	160565571	160494988	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_160502203_160504957_160505053_160508106_160508270_160509799_160509872_160514076_160514182_160515451_160515581_160521778_160521911_160525799_160525845_160525937_160526108_160527952_160528040_160530854_160530941_160531461_160531558_160535512_160535566_160535660_160535691_160535807_160535898_160536795_160536841_160565213
H1_mix_00063397	chr3	-	3295	5	FSM	ENSG00000169255.15	ENST00000320474.10	3295	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	5.61248608016091	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGTGTTCTATTCCTAC	59	False	161105383	-2	True	AATAAA	-32	NA	161105349	161083882	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_161086789_161101138_161101234_161103426_161103518_161104318_161104407_161105234
H1_mix_00063398	chr3	-	3528	5	FSM	ENSG00000169255.15	ENST00000651292.1	3604	5	88	-12	10	0	multi-exon	FALSE	canonical	3	22	junction_4	29.0559804515353	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTTTGTGTATTTACTTTT	248	False	NA	-27	True	AATAAA	-7	NA	161105160	161083907	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_161086789_161101138_161101234_161103426_161103515_161104318_161104407_161104784
H1_mix_00063399	chr3	-	3274	5	FSM	ENSG00000169255.15	ENST00000651686.1	3256	5	0	-18	0	-7	multi-exon	FALSE	canonical	3	27	junction_3	22.9932055181525	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATAATTAGAGTGTTCTA	-31	True	NA	-9	True	AATAAA	-25	NA	161105338	161083889	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_161086789_161101138_161101234_161103426_161103515_161104318_161104407_161105234
H1_mix_00063401	chr3	-	3314	3	FSM	ENSG00000196542.9	ENST00000359175.9	3094	3	-212	-8	-212	5	multi-exon	FALSE	canonical	0	0	junction_1	58	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCCAGATTTACTTTTTA	-66	True	NA	NA	False	AATAAA	-24	NA	161373092	161344792	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_161346356_161359801_161359895_161371434
H1_mix_00063402	chr3	-	3453	4	FSM	ENSG00000196542.9	ENST00000497137.1	880	4	-1591	-982	-212	5	multi-exon	FALSE	canonical	0	0	junction_2	51.6999892542435	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCCAGATTTACTTTTTA	-66	True	NA	NA	False	AATAAA	-24	NA	161373092	161344792	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_161346356_161347964_161348104_161359801_161359895_161371434
H1_mix_00063404	chr3	-	545	1	FSM	ENSG00000234851.4	ENST00000471152.1	471	1	0	-74	0	74	mono-exon	FALSE	NA	NA	NA	NA	NA	259	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTTCAAGTTAGAAGAAAAA	13	False	NA	6	True	CATAAA	-18	NA	161429597	161429052	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_161429100_161429600
H1_mix_00063407	chr3	-	1250	6	Intergenic	novelGene_964	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	44	junction_1	378.728609957051	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGATTTTCAGCAGTGAG	0	True	NA	-11	True	AATAAA	-19	NA	164341489	164050784	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_164051172_164074387_164074606_164075972_164076045_164193507_164193677_164196618_164196701_164341167
H1_mix_00063408	chr3	-	1073	4	Intergenic	novelGene_966	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	44	junction_1	450.246105541798	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATATATTTTCCCCCTT	0	True	NA	-34	True	NA	NA	NA	164341489	164050807	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_164051172_164074387_164074606_164193507_164193677_164341167
H1_mix_00063409	chr3	-	3545	3	Intergenic	novelGene_967	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	121	junction_2	191.5	29	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGTATCTATGGTTCTT	0	True	NA	-38	True	TATAAA	-17	NA	164341489	164071454	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_164074606_164075972_164076045_164341167
H1_mix_00063410	chr3	-	2309	4	Intergenic	novelGene_971	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	901	junction_3	94.9982455978355	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTAATCAGATGTCTGTT	1	True	NA	-11	True	AATAAA	-26	NA	164341488	164072868	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_164074606_164193507_164193677_164196618_164196701_164341167
H1_mix_00063411	chr3	-	2299	4	Intergenic	novelGene_972	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	278	junction_2	92.499849849728	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTAATCAGATGTCTGTT	1	True	NA	-11	True	AATAAA	-26	NA	164341488	164072868	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_164074606_164075972_164076045_164193507_164193677_164341167
H1_mix_00063412	chr3	-	2227	3	Intergenic	novelGene_973	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	405	junction_2	361	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTAATCAGATGTCTGTT	1	True	NA	-11	True	AATAAA	-26	NA	164341488	164072868	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_164074606_164193507_164193677_164341167
H1_mix_00063413	chr3	-	2375	5	Intergenic	novelGene_975	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	278	junction_2	311.122463830563	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGGAATAATTAATCAGAT	0	True	NA	-18	True	AATAAA	-19	NA	164341489	164072875	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_164074606_164075972_164076045_164193507_164193677_164196618_164196701_164341167
H1_mix_00063414	chr3	-	3085	4	Intergenic	novelGene_978	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_1	34.4705993887867	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAATTACTTCTTCCATTT	0	True	NA	-6	True	AATAAA	-16	NA	164341489	164189869	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_164192334_164193507_164193677_164257931_164258062_164341167
H1_mix_00063415	chr3	-	4095	3	Intergenic	novelGene_979	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	153	junction_2	454.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGCTTTTTAACTACA	9	False	NA	-21	True	AATAAA	-2	NA	164341480	164189922	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_164193677_164196618_164196701_164341221
H1_mix_00063416	chr3	-	2401	4	FSM	ENSG00000114200.10	ENST00000264381.8	2405	4	0	4	0	-3	multi-exon	FALSE	canonical	3	11	junction_2	3.29983164553722	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCATTGGTCTCTTTGTTTT	-2	True	NA	NA	False	ATTAAA	-14	NA	165837423	165772907	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_165773507_165786144_165786312_165829516_165831042_165837313
H1_mix_00063417	chr3	-	702	3	FSM	ENSG00000114200.10	ENST00000479451.5	702	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	5.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCAGTGCTCTGCTTTTA	1	True	NA	NA	False	AATAAA	-22	NA	165837420	165773078	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_165773507_165786144_165786312_165837313
H1_mix_00063419	chr3	-	726	8	FSM	ENSG00000169064.13	ENST00000474464.5	746	8	20	0	6	0	multi-exon	FALSE	canonical	3	9	junction_7	5.44733598998218	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGGCACTAAAGCTCCACA	24	True	NA	NA	False	NA	NA	NA	167380277	167350456	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_167350516_167359869_167359980_167360674_167360724_167365885_167365977_167368460_167368575_167372833_167372951_167379637_167379793_167380246
H1_mix_00063420	chr3	-	575	4	FSM	ENSG00000174776.12	ENST00000466760.5	575	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.68178700572909	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATACACTAAATGTTGGGC	3945	False	NA	NA	False	NA	NA	NA	167653978	167554772	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_167554799_167560063_167560229_167653260_167653500_167653833
H1_mix_00063424	chr3	-	1040	9	FSM	ENSG00000114209.15	ENST00000470131.5	1026	9	0	-14	0	0	multi-exon	FALSE	canonical	3	25	junction_8	611.442147713093	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTTGACTGTATAAATT	-15	True	NA	NA	False	NA	NA	NA	167734892	167684241	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_167684390_167687233_167687317_167687614_167687694_167695595_167695723_167697008_167697127_167704841_167704896_167720061_167720274_167734213_167734346_167734805
H1_mix_00063426	chr3	-	456	1	FSM	ENSG00000241120.1	ENST00000463578.1	288	1	-37	-131	-37	131	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGAAACATTTAAGGAGGG	NA	False	NA	NA	False	NA	NA	NA	167694679	167694223	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_167694200_167694700
H1_mix_00063429	chr3	-	4328	16	FSM	ENSG00000173905.9	ENST00000470487.6	4310	16	2	-20	2	20	multi-exon	FALSE	canonical	3	10	junction_9	3.87585116099964	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTCTCTTATTAGTTTA	1	True	NA	1	True	AATAAA	-35	NA	168095922	168008668	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_168010419_168010742_168010824_168024525_168024595_168024927_168025096_168027727_168027838_168029222_168029303_168029779_168030037_168032519_168032853_168036835_168036995_168040785_168040870_168041391_168041475_168043378_168043530_168044827_168044882_168046949_168047000_168048290_168048366_168095098
H1_mix_00063430	chr3	-	4331	16	NNC	ENSG00000173905.9	novel	4310	16	NA	NA	2	20	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	4.40403855064366	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTCTCTTATTAGTTTA	1	True	NA	1	True	AATAAA	-35	NA	168095922	168008668	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_168010419_168010742_168010824_168024525_168024595_168024927_168025096_168027727_168027838_168029219_168029303_168029779_168030037_168032519_168032853_168036835_168036995_168040785_168040870_168041391_168041475_168043378_168043530_168044827_168044882_168046949_168047000_168048290_168048366_168095098
H1_mix_00063432	chr3	-	443	1	FSM	ENSG00000270141.3	ENST00000602385.1	541	1	95	3	95	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGACTGGGCCAGTGTG	8374	False	NA	83	True	GGGGCT	-17	NA	169764965	169764522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_169764500_169765000
H1_mix_00063434	chr3	-	3477	1	FSM	ENSG00000269984.1	ENST00000602342.1	3143	1	163	-497	163	497	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTCAACATTGAAATGG	NA	False	NA	NA	False	NA	NA	NA	169780171	169776694	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_169776700_169780200
H1_mix_00063435	chr3	-	2383	11	FSM	ENSG00000171757.17	ENST00000446859.7	2383	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	10.8055541273921	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGTGTCTGGCTTCTTT	1	True	NA	NA	False	TATAAA	-23	NA	169812904	169793002	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_169793839_169795484_169795612_169796213_169796370_169796744_169796900_169800658_169800755_169804052_169804182_169806847_169806932_169807425_169807491_169807587_169807710_169808627_169808746_169812409
H1_mix_00063436	chr3	-	3787	9	FSM	ENSG00000171757.17	ENST00000522596.6	3787	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_8	8.45207075218848	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGTAGGGTAATTTTTTA	-1	True	NA	NA	False	ATTAAA	-28	NA	169812690	169793472	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_169796370_169796744_169796900_169800658_169800755_169804052_169804182_169806847_169806932_169807425_169807491_169807587_169807710_169808627_169808746_169812569
H1_mix_00063438	chr3	-	3068	9	FSM	ENSG00000171757.17	ENST00000522080.5	1475	9	-379	-1214	0	-1039	multi-exon	FALSE	canonical	3	17	junction_2	7.23597781920315	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGCTGGGCCTGTAGTCCC	1	True	NA	NA	False	ACTAAA	-28	NA	169812904	169794565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_169796370_169796744_169796900_169800658_169800755_169804052_169804182_169806847_169806932_169807425_169807491_169807587_169807710_169808627_169808746_169812409
H1_mix_00063439	chr3	-	913	4	FSM	ENSG00000173889.16	ENST00000484068.5	913	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	8.28653526310404	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAAATGGTTTTCTTCTTC	NA	False	NA	NA	False	ATTAAA	-17	NA	170102899	170086731	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_170087102_170097171_170097385_170102478_170102711_170102801
H1_mix_00063441	chr3	-	12650	15	FSM	ENSG00000173889.16	ENST00000495893.7	12652	15	6	-4	1	4	multi-exon	FALSE	canonical	3	15	junction_2	5.84144237150311	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATTGAATAATTTTTTTT	8	True	NA	-2	True	AATAAA	-21	NA	170181727	170087579	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_170097385_170102478_170102711_170102801_170102935_170106831_170106947_170113359_170113520_170117225_170117477_170122590_170122745_170128683_170129553_170136418_170136666_170145422_170145522_170149085_170149245_170171372_170171451_170172556_170172713_170178772_170178939_170181701
H1_mix_00063444	chr3	-	548	2	Antisense	novelGene_ENSG00000285051.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACAAAGCCTGTTTGGTG	17	False	NA	-5	True	AATAAA	-14	NA	170823439	170817649	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr3_-_170817966_170823207
H1_mix_00063447	chr3	-	670	4	FSM	ENSG00000163584.18	ENST00000475836.5	581	4	0	-89	0	89	multi-exon	TRUE	canonical	3	85	junction_2	525.745396767506	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTTTTTCCCACGATTT	-1	True	NA	NA	False	TTTAAA	-16	NA	170870195	170866173	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_170866525_170868012_170868202_170868297_170868391_170870158
H1_mix_00063448	chr3	-	590	4	FSM	ENSG00000163584.18	ENST00000494771.5	587	4	0	-3	0	0	multi-exon	FALSE	canonical	3	85	junction_2	605.991749118748	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTCTCATTTTTTTGA	175	False	NA	40	True	AATAAA	-19	NA	170870208	170866263	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_170866525_170868012_170868202_170868297_170868388_170870158
H1_mix_00063449	chr3	-	506	4	FSM	ENSG00000163584.18	ENST00000463836.1	506	4	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_3	563.562675209146	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTTTTGTCTCATTTTT	-1	True	NA	36	True	AATAAA	-15	NA	170870195	170866267	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_170866525_170868012_170868135_170868297_170868388_170870158
H1_mix_00063450	chr3	-	5534	5	FSM	ENSG00000163577.8	ENST00000295822.7	5534	5	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_2	16.2538456987877	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTCTTGTACATATACAT	10	True	NA	NA	False	AATAAA	-19	NA	170908637	170888417	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_170893420_170894291_170894424_170906988_170907094_170907641_170907842_170908542
H1_mix_00063451	chr3	-	9892	33	FSM	ENSG00000154310.17	ENST00000436636.7	9892	33	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_19	22.5230567627376	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGCCTCCTTGTTCCTCA	-3	True	NA	NA	False	AATAAA	-13	NA	171460405	171058413	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_171063965_171066186_171066327_171066575_171066736_171068847_171068998_171071222_171071324_171079517_171079653_171082250_171082395_171084154_171084326_171085117_171085230_171087341_171087507_171093838_171093969_171101448_171101634_171107182_171107207_171108064_171108163_171110713_171110878_171123595_171123703_171125911_171126152_171128713_171128879_171138190_171138380_171139469_171139557_171140398_171140510_171157459_171157665_171161269_171161337_171167094_171167271_171175251_171175331_171177325_171177381_171188701_171188833_171190696_171190788_171194524_171194636_171211115_171211242_171228164_171228222_171369619_171369686_171460006
H1_mix_00063452	chr3	-	14240	32	FSM	ENSG00000154310.17	ENST00000357327.9	3996	32	-373	-9871	-28	4404	multi-exon	TRUE	canonical	3	29	junction_12	17.2081581697825	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACAGTTTTGTTGTTCT	32	False	NA	NA	False	AATAAA	-41	NA	171460436	171054009	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_171063965_171066186_171066327_171066575_171066736_171068847_171068998_171071222_171071324_171079517_171079653_171082250_171082395_171084154_171084326_171085117_171085230_171087341_171087507_171093838_171093969_171101448_171101634_171107182_171107207_171108064_171108163_171110713_171110878_171123595_171123703_171125911_171126152_171128713_171128879_171138190_171138380_171140398_171140510_171157459_171157665_171161269_171161337_171167094_171167271_171175251_171175331_171177325_171177381_171188701_171188833_171190696_171190788_171194524_171194636_171211115_171211242_171228164_171228222_171369619_171369686_171460006
H1_mix_00063453	chr3	-	13262	31	FSM	ENSG00000154310.17	ENST00000470834.5	3972	31	-420	-8870	-75	3403	multi-exon	FALSE	canonical	3	38	junction_12	15.1202954115762	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGATGTCATATGAAGCA	NA	False	NA	NA	False	AATAAA	-32	NA	171460483	171055010	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_171063965_171066186_171066327_171066575_171066736_171068847_171068998_171071222_171071324_171079517_171079653_171082250_171082395_171084154_171084326_171085117_171085230_171087341_171087507_171093838_171093969_171101448_171101634_171108064_171108163_171110713_171110878_171123595_171123703_171125911_171126152_171128713_171128879_171138190_171138380_171140398_171140510_171157459_171157665_171161269_171161337_171167094_171167271_171175251_171175331_171177325_171177381_171188701_171188833_171190696_171190788_171194524_171194636_171211115_171211242_171228164_171228222_171369619_171369686_171460006
H1_mix_00063454	chr3	-	766	3	FSM	ENSG00000154310.17	ENST00000465393.1	750	3	-31	15	-28	-15	multi-exon	FALSE	canonical	3	11	junction_1	17.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTATTTGATCATGTCT	32	False	NA	-21	True	ATTAAA	-1	NA	171460436	171346948	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_171347219_171369619_171369686_171460006
H1_mix_00063457	chr3	-	4494	5	FSM	ENSG00000144959.11	ENST00000475381.7	4536	5	2	40	2	-40	multi-exon	FALSE	canonical	3	48	junction_4	3.56195171219375	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGACCTTGTCATTACAAAT	15	True	NA	NA	False	NA	NA	NA	172711065	172630288	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_172634093_172635915_172636088_172645622_172645693_172647885_172648115_172710846
H1_mix_00063458	chr3	-	4005	4	FSM	ENSG00000144959.11	ENST00000543711.5	4062	4	57	0	-49	0	multi-exon	FALSE	canonical	1	2	junction_3	25.0377492776186	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCCGTCTCATTTTCTG	35	False	NA	0	True	AATAAA	-28	NA	172711161	172630644	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_172634093_172635915_172636088_172645622_172645693_172710846
H1_mix_00063460	chr3	-	621	1	FSM	ENSG00000227440.1	ENST00000430660.1	441	1	-79	-101	-79	101	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CTAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	ATTAAA	-11	NA	172829255	172828634	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_172828600_172829300
H1_mix_00063461	chr3	-	444	1	FSM	ENSG00000214192.3	ENST00000397758.2	440	1	-6	2	-6	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	415	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAACTAATCAAAAAAAAAAA	-1	True	NA	NA	False	AAGAAA	-41	NA	175718676	175718232	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_175718200_175718700
H1_mix_00063463	chr3	-	2799	2	ISM	ENSG00000288895.1	ENST00000693515.1	641	3	-181	2	-181	-2	intron_retention	FALSE	canonical	3	766	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTGTTTGGTGGTCTCT	NA	False	NA	-5	True	AATAAA	-20	NA	176327249	176321656	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_176322019_176324812
H1_mix_00063464	chr3	-	1035	3	FSM	ENSG00000288895.1	ENST00000690443.1	854	3	-183	2	-181	-2	multi-exon	FALSE	canonical	3	171	junction_2	297.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTGTTTGGTGGTCTCT	NA	False	NA	-5	True	AATAAA	-20	NA	176327249	176321656	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_176322019_176324812_176325001_176326764
H1_mix_00063465	chr3	-	820	3	FSM	ENSG00000288895.1	ENST00000693515.1	641	3	-181	2	-181	-2	multi-exon	FALSE	canonical	3	82	junction_2	342	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTGTTTGGTGGTCTCT	NA	False	NA	-5	True	AATAAA	-20	NA	176327249	176321656	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_176322019_176324812_176325001_176326979
H1_mix_00063467	chr3	-	6576	17	NNC	ENSG00000177565.18	novel	7948	16	NA	NA	0	1917	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	91.9215018371654	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCCTCCAAGCCACTTT	-9	True	NA	NA	False	NA	NA	NA	177196478	177017422	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_177017451_177020754_177025525_177026372_177026475_177032970_177033137_177034197_177034326_177038097_177038173_177038312_177038435_177046128_177046190_177047299_177047398_177047485_177047550_177049996_177050139_177050477_177050611_177051503_177051727_177053772_177053919_177064919_177065023_177098465_177098542_177196339
H1_mix_00063468	chr3	-	6542	17	NNC	ENSG00000177565.18	novel	2535	17	NA	NA	0	1917	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	83.0818261941202	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCCTCCAAGCCACTTT	-4	True	NA	NA	False	NA	NA	NA	177197225	177017422	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_177017451_177020754_177025525_177026372_177026475_177032970_177033137_177034197_177034326_177038097_177038173_177038312_177038435_177046128_177046190_177047299_177047398_177047485_177047550_177049996_177050139_177050477_177050611_177051503_177051727_177053772_177053919_177064919_177065023_177098465_177098542_177197120
H1_mix_00063469	chr3	-	8366	16	FSM	ENSG00000177565.18	ENST00000430069.5	7948	16	-152	-266	-146	251	multi-exon	FALSE	canonical	3	39	junction_15	69.4439502204636	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGAGCACCTCAAATAGAC	5164	False	NA	NA	False	AAAACA	-8	NA	177196630	177019088	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_177025525_177026372_177026475_177032970_177033137_177034197_177034326_177038097_177038173_177038312_177038435_177046128_177046190_177047299_177047398_177047485_177047550_177049996_177050139_177050477_177050611_177051503_177051727_177053772_177053919_177064919_177065023_177098465_177098542_177196339
H1_mix_00063472	chr3	-	7639	2	FSM	ENSG00000177565.18	ENST00000474363.1	6229	2	0	-1410	0	0	multi-exon	FALSE	canonical	3	300	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAATGTTTCTTGGTTGTTG	5261	False	NA	-7	True	ATTAAA	-35	NA	177027830	177019343	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_177025525_177026372
H1_mix_00063473	chr3	-	8182	16	FSM	ENSG00000177565.18	ENST00000457928.7	8182	16	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_15	54.8940798265168	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAATGTTTCTTGGTTGTTG	-22	True	NA	-7	True	ATTAAA	-35	NA	177197482	177019343	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_177025525_177026372_177026475_177032970_177033137_177034197_177034326_177038097_177038173_177038312_177038435_177046128_177046190_177047299_177047398_177047485_177047550_177049996_177050139_177050477_177050611_177051503_177051727_177053772_177053919_177064919_177065023_177098465_177098542_177197120
H1_mix_00063474	chr3	-	8195	16	NIC	ENSG00000177565.18	novel	2535	17	NA	NA	17	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	92.5675729159815	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAGACAATTACTAATGT	-5	True	NA	-20	True	ATTAAA	-22	NA	177197465	177019356	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_177025525_177026372_177026475_177032970_177033137_177034197_177034326_177038097_177038173_177038312_177038435_177046128_177046190_177047299_177047398_177047485_177047550_177049996_177050139_177050477_177050611_177051503_177051727_177053772_177053919_177064919_177065023_177079826_177079946_177197120
H1_mix_00063475	chr3	-	3176	17	NIC	ENSG00000177565.18	novel	2535	17	NA	NA	-7	579	combination_of_known_junctions	FALSE	canonical	3	9	junction_16	93.506015849249	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCTCTGATTCTGCATT	4593	False	NA	NA	False	AATGAA	-26	NA	177197201	177024186	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_177025525_177026372_177026475_177032970_177033137_177034197_177034326_177038097_177038173_177038312_177038435_177046128_177046190_177047299_177047398_177047485_177047550_177049996_177050139_177050477_177050611_177051503_177051727_177053772_177053919_177064919_177065023_177098465_177098542_177160870_177160989_177197120
H1_mix_00063482	chr3	-	391	2	FSM	ENSG00000237978.6	ENST00000421498.1	393	2	2	0	2	0	multi-exon	FALSE	canonical	1	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTACAAGCCATTGATTTG	NA	False	NA	-29	True	AATAAA	-21	NA	178801934	178748987	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_178749237_178801792
H1_mix_00063483	chr3	-	643	3	NIC	ENSG00000237978.6	novel	964	8	NA	NA	-147	0	combination_of_known_splicesites	FALSE	canonical	3	52	junction_1	6.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTACAAGCCATTGATTTG	NA	False	NA	-29	True	AATAAA	-21	NA	178860552	178748987	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_178749237_178859488_178859624_178860293
H1_mix_00063484	chr3	-	2912	7	FSM	ENSG00000172667.11	ENST00000432729.5	2944	7	32	0	32	0	multi-exon	FALSE	canonical	2	6	junction_6	13.4752860204648	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1995	False	NA	NA	False	NA	NA	NA	179072183	179023738	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_179025226_179027422_179027524_179027645_179027813_179030879_179031000_179067482_179067810_179071326_179071448_179071594
H1_mix_00063489	chr3	-	1126	7	FSM	ENSG00000136522.14	ENST00000259038.6	1126	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_6	461.3595849949	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTTAGTCCTTAAAGTA	-3	True	NA	-22	True	AATAAA	-31	NA	179604640	179588454	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_179588996_179592643_179592740_179593764_179593896_179598674_179598772_179601729_179601791_179602651_179602738_179604526
H1_mix_00063490	chr3	-	1175	7	NNC	ENSG00000136522.14	novel	1354	7	NA	NA	0	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	480.836424022418	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATGAGAAATACATTTAGT	-1	True	NA	-32	True	AATAAA	-21	NA	179604638	179588464	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_179588996_179592643_179592740_179593764_179593896_179598674_179598772_179601729_179601791_179602651_179602797_179604524
H1_mix_00063491	chr3	-	1039	6	FSM	ENSG00000136522.14	ENST00000392659.2	673	6	0	-366	0	-10	multi-exon	FALSE	canonical	3	51	junction_5	500.04743774966	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATGAGAAATACATTTAGT	4	True	NA	-32	True	AATAAA	-21	NA	179604649	179588464	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_179588996_179592643_179592740_179593764_179593896_179598674_179598772_179601729_179601791_179604526
H1_mix_00063492	chr3	-	8946	15	FSM	ENSG00000114757.19	ENST00000467460.6	9089	15	0	143	0	-143	multi-exon	FALSE	canonical	0	0	junction_13	4.69693777793531	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTGGAAATCAGGAATGC	-6	True	NA	NA	False	ATTAAA	-35	NA	180036937	179795100	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_179802033_179807673_179807832_179808271_179808438_179809470_179809669_179811800_179811872_179815860_179816005_179819859_179819977_179859061_179859158_179874326_179874424_179875353_179875478_179879928_179880124_179887672_179887785_179898141_179898247_179971593_179971666_180036578
H1_mix_00063493	chr3	-	1416	6	FSM	ENSG00000205981.9	ENST00000382564.8	1416	6	0	0	0	0	multi-exon	FALSE	canonical	3	1370	junction_3	98.8441197037032	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTACTGTTTGTCTAAC	-9	True	NA	-3	True	AATAAA	-24	NA	180989736	180983708	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_180984711_180985925_180985997_180986942_180987023_180988022_180988097_180988177_180988230_180989599
H1_mix_00063494	chr3	-	1327	5	FSM	ENSG00000205981.9	ENST00000469657.5	1239	5	-24	-64	9	0	multi-exon	FALSE	canonical	3	149	junction_2	612.389173646955	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTACTGTTTGTCTAAC	0	True	NA	-3	True	AATAAA	-24	NA	180989727	180983708	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_180984711_180985925_180985997_180988022_180988097_180988177_180988230_180989599
H1_mix_00063495	chr3	-	772	5	FSM	ENSG00000205981.9	ENST00000491873.5	769	5	0	-3	0	0	multi-exon	FALSE	canonical	3	66	junction_4	642.512451241219	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATGATGGAAATTAGCTT	17	True	NA	NA	False	GATAAA	-24	NA	180989710	180984274	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_180984711_180985925_180985997_180986942_180987023_180988022_180988097_180989599
H1_mix_00063496	chr3	-	810	6	FSM	ENSG00000205981.9	ENST00000486355.1	828	6	18	0	-10	0	multi-exon	FALSE	canonical	3	65	junction_2	584.799658002636	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATGATGGAAATTAGCTT	-24	True	NA	NA	False	GATAAA	-24	NA	180989751	180984274	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_180984711_180985925_180985997_180986997_180987023_180988022_180988097_180988177_180988230_180989599
H1_mix_00063497	chr3	-	610	6	FSM	ENSG00000205981.9	ENST00000479269.5	610	6	0	0	0	0	multi-exon	FALSE	canonical	1	67	junction_5	593.691165506107	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGCTACAATTTTAAAAAA	319	False	NA	-54	True	AATAAA	-8	NA	180989518	180984564	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_180984711_180985925_180985997_180986942_180987023_180988022_180988097_180988177_180988230_180989331
H1_mix_00063500	chr3	-	8678	7	FSM	ENSG00000043093.15	ENST00000292782.9	7849	7	0	-829	0	829	multi-exon	FALSE	canonical	3	235	junction_6	36.9207108394312	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATGAATTACATGTCCAT	4	True	NA	NA	False	ATTAAA	-22	NA	182980538	182937244	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_182945174_182947237_182947335_182947549_182947633_182961225_182961357_182963880_182964050_182965536_182965754_182980486
H1_mix_00063501	chr3	-	3279	7	NIC	ENSG00000043093.15	novel	7849	7	NA	NA	-184	-76	combination_of_known_junctions	FALSE	canonical	3	7	junction_6	108.921097844061	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGATTTAATGTGGTGTG	5587	False	NA	2	True	ATTAAA	-30	NA	182980335	182942851	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_182945174_182947237_182947335_182947549_182947633_182961225_182961357_182963880_182964050_182965536_182965754_182980075
H1_mix_00063504	chr3	-	6065	29	FSM	ENSG00000053524.13	ENST00000473233.5	4748	29	-1116	-201	-315	192	multi-exon	TRUE	canonical	2	8	junction_7	34.8959824598296	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACATTATATTTTCTGAA	NA	False	NA	NA	False	NA	NA	NA	183429093	183177848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_183179693_183180070_183180160_183192998_183193097_183195221_183195256_183205875_183205955_183206121_183206215_183207607_183207824_183215968_183216095_183219855_183219925_183223345_183223439_183224097_183224191_183228296_183228367_183229665_183229782_183230950_183231018_183276871_183276958_183289119_183289221_183295299_183295478_183296975_183297168_183300004_183300197_183309715_183309836_183310914_183311030_183311647_183311773_183318067_183318218_183323234_183323352_183338799_183338920_183341539_183341631_183379296_183379412_183389695_183389780_183427901
H1_mix_00063505	chr3	-	5326	30	FSM	ENSG00000053524.13	ENST00000328913.8	5326	30	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	35.160782390492	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTCAAGTTATTTATT	3	True	NA	2	True	ATTAAA	-22	NA	183428619	183178040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_183179504_183179576_183179693_183180070_183180160_183192998_183193097_183195221_183195256_183205875_183205955_183206121_183206215_183207607_183207824_183215968_183216095_183219855_183219925_183223345_183223439_183224097_183224191_183228296_183228367_183229665_183229782_183230950_183231018_183276871_183276958_183289119_183289221_183295299_183295478_183296975_183297168_183300004_183300197_183309715_183309836_183310914_183311030_183311647_183311773_183318067_183318218_183323234_183323352_183338799_183338920_183341539_183341631_183379296_183379412_183389695_183389780_183427901
H1_mix_00063511	chr3	-	722	6	FSM	ENSG00000175193.14	ENST00000417784.5	722	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_5	388.591096140918	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGATGTGTGTGTTCTCTC	NA	False	NA	-4	True	AATAAA	-21	NA	183844274	183829389	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_183829710_183833491_183833590_183833723_183833826_183840569_183840641_183842297_183842385_183844230
H1_mix_00063512	chr3	-	1383	10	FSM	ENSG00000175193.14	ENST00000317096.9	1501	10	0	118	0	1	multi-exon	FALSE	canonical	3	788	junction_5	129.634529007943	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGATGTGTGTGTTCTCTCT	-4	True	NA	-3	True	AATAAA	-22	NA	183884880	183829388	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_183829710_183833491_183833590_183833723_183833826_183840569_183840641_183842297_183842448_183844230_183844327_183862752_183862802_183866624_183866766_183867864_183868061_183884721
H1_mix_00063513	chr3	-	1240	9	FSM	ENSG00000175193.14	ENST00000311101.9	1240	9	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_4	287.433225941261	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGATGTGTGTGTTCTCTC	-12	True	NA	-4	True	AATAAA	-21	NA	183884888	183829389	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_183829710_183833491_183833590_183833723_183833826_183840569_183840641_183844230_183844327_183862752_183862802_183866624_183866766_183867864_183868061_183884721
H1_mix_00063514	chr3	-	1346	10	FSM	ENSG00000175193.14	ENST00000421484.5	1347	10	1	0	0	0	multi-exon	FALSE	canonical	3	75	junction_6	324.586232336219	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGGAAGATGCCAGCATC	-31	True	NA	-74	True	NA	NA	NA	183884907	183829508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_183829710_183833491_183833590_183833723_183833826_183840569_183840641_183842297_183842448_183844230_183844327_183862696_183862802_183866624_183866766_183867864_183868061_183884721
H1_mix_00063515	chr3	-	5846	30	FSM	ENSG00000114770.17	ENST00000334444.11	5790	30	-55	-1	0	1	multi-exon	FALSE	canonical	3	98	junction_20	34.7419226448486	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCGTGTATCAAACAATT	9870	False	NA	-4	True	AATAAA	-23	NA	184017939	183919932	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_183921402_183925554_183925720_183927329_183927444_183928746_183928826_183937900_183938061_183942726_183942917_183945849_183945940_183947323_183947511_183949752_183949882_183949971_183950126_183951440_183951571_183951856_183952004_183953085_183953271_183959732_183959836_183961510_183961655_183963384_183963589_183965184_183965258_183965376_183965502_183967694_183967767_183971562_183971920_183977516_183977625_183978502_183978652_183981726_183981875_183982450_183982625_183982773_183983008_183987769_183987918_183988571_183988728_183989225_183989384_184014263_184014448_184017829
H1_mix_00063516	chr3	-	5325	5	FSM	ENSG00000114770.17	ENST00000427120.6	4697	5	0	-628	0	628	multi-exon	FALSE	canonical	3	202	junction_2	18.7533330370897	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGCGCACTGGTCCCTG	9946	False	NA	NA	False	NA	NA	NA	184017863	183983124	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_183987918_183988571_183988728_183989225_183989384_184014263_184014448_184017829
H1_mix_00063517	chr3	-	2551	7	FSM	ENSG00000114770.17	ENST00000382494.6	1923	7	0	-628	0	628	multi-exon	FALSE	canonical	3	32	junction_1	94.935065527268	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGCGCACTGGTCCCTG	16	True	NA	NA	False	NA	NA	NA	184017889	183983124	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_183984895_183985303_183985379_183987769_183987918_183988571_183988728_183989225_183989384_184014263_184014448_184017829
H1_mix_00063520	chr3	-	883	3	FSM	ENSG00000114770.17	ENST00000446941.2	883	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	120	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCGTGTATGTTTGTCTAT	9870	False	NA	NA	False	ATTAAA	-18	NA	184017939	184000662	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_184001252_184014263_184014448_184017829
H1_mix_00063521	chr3	-	1459	10	NNC	ENSG00000214160.10	novel	1552	9	NA	NA	0	29909	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	259.955599247731	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTTGCTCTACCAGATA	-10	True	NA	NA	False	AAAAAG	-4	NA	184248962	184212391	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_184212421_184242422_184242677_184242812_184242957_184243552_184243631_184243790_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184245712_184245813_184248744
H1_mix_00063522	chr3	-	1453	9	NIC	ENSG00000214160.10	novel	1552	9	NA	NA	0	-29	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	282.469467376564	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAAGAGGCACTTTATTG	23	True	NA	-4	True	GATAAA	-17	NA	184248929	184242329	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_184242677_184242812_184242958_184243553_184243631_184243790_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184245712_184245813_184248781
H1_mix_00063523	chr3	-	1525	9	FSM	ENSG00000214160.10	ENST00000397676.8	1552	9	0	27	0	-27	multi-exon	FALSE	canonical	0	0	junction_2	244.169382806281	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGAGGCACTTTATTGCA	-10	True	NA	-2	True	GATAAA	-19	NA	184248962	184242327	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_184242677_184242812_184242958_184243553_184243631_184243790_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184245712_184245813_184248744
H1_mix_00063524	chr3	-	1425	8	FSM	ENSG00000214160.10	ENST00000411922.5	1452	8	0	27	0	-27	multi-exon	FALSE	canonical	0	0	junction_2	315.774331717175	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGAGGCACTTTATTGCA	-10	True	NA	-2	True	GATAAA	-19	NA	184248962	184242327	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_184242677_184242812_184242958_184243553_184243631_184243790_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184248744
H1_mix_00063525	chr3	-	1533	9	FSM	ENSG00000214160.10	ENST00000445626.6	1533	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	312.138891360881	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTGTGCAACCTACATG	-9	True	NA	-14	True	AATAAA	-14	NA	184249548	184242424	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_184242677_184242812_184242958_184243553_184243631_184243790_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184245712_184245813_184249225
H1_mix_00063528	chr3	-	1706	9	FSM	ENSG00000214160.10	ENST00000455059.5	1697	9	1	-10	1	0	multi-exon	FALSE	canonical	0	0	junction_2	316.944962690685	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCTGCCCTTCCAAATAA	20	True	NA	-48	True	NA	NA	NA	184249519	184242458	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_184242677_184242812_184242958_184243553_184243631_184243790_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184245712_184245813_184248989
H1_mix_00063531	chr3	-	1452	2	FSM	ENSG00000163888.4	ENST00000296238.4	1452	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGGCCGCTGCTTAG	2	True	NA	-4	True	AATAAA	-18	NA	184261553	184259212	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_184260228_184261116
H1_mix_00063532	chr3	-	3190	24	FSM	ENSG00000114859.16	ENST00000344937.11	3187	24	0	-3	0	0	multi-exon	TRUE	canonical	1	1	junction_11	13.9071998597672	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGCCCGTTGGCTCT	1	True	NA	2	True	AATAAA	-28	NA	184361602	184346184	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_184346801_184346934_184347022_184352012_184352118_184352292_184352332_184352442_184352497_184352736_184352811_184353032_184353148_184353249_184353423_184353661_184353796_184354100_184354315_184354547_184354608_184354903_184354974_184355373_184355530_184355693_184355779_184356992_184357095_184357181_184357267_184357361_184357488_184357619_184357699_184357778_184357857_184357961_184358096_184358181_184358311_184358681_184358814_184358974_184359132_184361416
H1_mix_00063536	chr3	-	1652	12	FSM	ENSG00000114859.16	ENST00000485667.1	1652	12	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_7	7.01945348818035	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGACTTCTCCTGGGTGGC	5276	False	NA	NA	False	NA	NA	NA	184361486	184355054	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_184355530_184355693_184355779_184356992_184357095_184357181_184357267_184357361_184357488_184357619_184357699_184357778_184357857_184357961_184358096_184358181_184358311_184358681_184358814_184358974_184359132_184361416
H1_mix_00063537	chr3	-	1854	6	FSM	ENSG00000090534.20	ENST00000647395.1	1918	6	59	5	-8	-5	multi-exon	FALSE	canonical	1	2	junction_5	2.93938769133981	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAGGGAAAGATGTTCTT	2	True	NA	NA	False	AATAAA	-27	NA	184378148	184371939	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_184373179_184373414_184373583_184375514_184375602_184375887_184376016_184376246_184376405_184378074
H1_mix_00063538	chr3	-	2272	1	FSM	ENSG00000177383.5	ENST00000317897.5	1701	1	0	-571	0	571	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACAAAGATGTTGACTGT	29	False	184712093	NA	False	NA	NA	NA	184712064	184709792	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_184709800_184712100
H1_mix_00063539	chr3	-	3798	7	FSM	ENSG00000113790.11	ENST00000231887.8	3801	7	0	3	0	-3	multi-exon	FALSE	canonical	3	59	junction_4	4.05859855396197	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTGTCTCCAAAGTGA	-7	True	NA	-3	True	AATAAA	-19	NA	185254049	185190626	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_185193488_185204415_185204758_185218135_185218241_185229431_185229544_185235289_185235463_185248413_185248518_185253948
H1_mix_00063540	chr3	-	4641	7	NIC	ENSG00000113790.11	novel	3801	7	NA	NA	-860	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_6	21.2870591883635	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTCTCCAAAGTGACTT	8	True	NA	0	True	AATAAA	-22	NA	185282850	185190623	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_185193488_185204415_185204758_185218135_185218241_185229431_185229544_185235289_185235463_185248413_185248518_185281909
H1_mix_00063541	chr3	-	1449	2	Genic_Genomic	ENSG00000229638.1	novel	1284	1	NA	NA	-57	9625	multi-exon	FALSE	non_canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTCAAAATTCTACAAGGA	0	True	NA	NA	False	NA	NA	NA	185418835	185407869	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr3_-_185407895_185417411
H1_mix_00063546	chr3	-	4283	16	FSM	ENSG00000073792.16	ENST00000382199.7	4283	16	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_6	136.318678919003	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGTCTCACTGCATGTGA	-1	True	NA	-1	True	AATAAA	-18	NA	185825042	185643129	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_185645624_185647024_185647139_185649402_185649535_185652093_185652169_185657285_185657403_185658340_185658410_185672540_185672670_185675295_185675432_185675790_185675914_185687056_185687192_185689354_185689628_185692698_185692763_185696611_185696664_185698298_185698348_185823152_185823214_185824782
H1_mix_00063547	chr3	-	509	6	FSM	ENSG00000073792.16	ENST00000461957.5	509	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	397.775112343646	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCCGCTGCGGATCCTG	2046	False	NA	NA	False	NA	NA	NA	185823271	185689454	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_185689628_185692698_185692763_185693176_185693229_185696611_185696664_185698298_185698348_185823152
H1_mix_00063551	chr3	-	4141	8	FSM	ENSG00000136527.19	ENST00000492417.5	4141	8	0	0	0	0	multi-exon	TRUE	canonical	3	1086	junction_5	88.4238401688373	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGTGCAGCTGTTCACA	8947	False	NA	-23	True	AATAAA	-19	NA	185929073	185916743	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_185917726_185918364_185918439_185919436_185919497_185921103_185921188_185922010_185922127_185923795_185923985_185925463_185925627_185926600
H1_mix_00063556	chr3	-	4082	13	FSM	ENSG00000244405.8	ENST00000306376.10	4082	13	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_6	20.4142855754385	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGAACCTGCCTCTTTCTT	5	True	NA	-4	True	AATAAA	-27	NA	186109089	186046313	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_186048861_186052029_186052132_186057074_186057245_186057422_186057492_186064416_186064477_186065812_186066073_186079816_186080105_186081045_186081176_186105304_186105356_186105448_186105497_186105624_186105713_186105823_186105943_186108939
H1_mix_00063558	chr3	-	642	6	FSM	ENSG00000244405.8	ENST00000476890.1	642	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	46.4990322479942	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTACAGGTTGAGTATTA	13	True	NA	-5	True	AATAAA	-21	NA	186109081	186095119	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_186095314_186105304_186105356_186105448_186105497_186105624_186105713_186105823_186105943_186108939
H1_mix_00063560	chr3	-	2700	8	FSM	ENSG00000113838.13	ENST00000338733.10	2700	8	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_4	17.5650394888511	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTCCTTTTTTTGTAAA	-18	True	NA	NA	False	AATAAA	-15	NA	186567339	186546066	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_186546956_186551128_186551280_186554253_186554752_186554897_186555085_186556408_186556776_186558416_186558573_186563993_186564373_186567266
H1_mix_00063561	chr3	-	3064	8	FSM	ENSG00000113838.13	ENST00000424280.5	3058	8	0	-6	0	0	multi-exon	FALSE	canonical	2	15	junction_7	68.2597081381252	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTCCTTTTTTTGTAAA	127	False	NA	NA	False	AATAAA	-15	NA	186570543	186546066	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_186546956_186551128_186551280_186554253_186554752_186554897_186555085_186556408_186556776_186558416_186558573_186563993_186564373_186570106
H1_mix_00063562	chr3	-	938	4	NNC	ENSG00000197099.8	novel	775	7	NA	NA	14054	5803	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	15.3260852434302	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCAGCAACCCTGTAGAT	NA	False	NA	NA	False	NA	NA	NA	186651649	186635706	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_186635783_186641392_186641624_186641953_186642129_186651193
H1_mix_00063565	chr3	-	1457	11	FSM	ENSG00000163918.12	ENST00000392481.6	1448	11	6	-15	6	0	multi-exon	FALSE	canonical	3	248	junction_10	165.023755865633	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTTAACATTCAAACTT	NA	False	NA	-21	True	AATAAA	-40	NA	186806689	186789879	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_186790065_186790141_186790256_186790325_186790407_186791724_186791851_186792489_186792611_186792803_186792948_186794657_186794778_186797534_186797615_186801116_186801196_186804582_186804725_186806424
H1_mix_00063570	chr3	-	654	2	FSM	ENSG00000163923.10	ENST00000455270.5	653	2	0	-1	0	1	multi-exon	FALSE	canonical	3	30	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCTGTCATCTTTAAAAA	8	True	NA	-15	True	AATAAA	-27	NA	187139484	187120946	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_187121329_187139212
H1_mix_00063571	chr3	-	730	3	FSM	ENSG00000163923.10	ENST00000296277.9	729	3	0	-1	0	1	multi-exon	FALSE	canonical	3	493	junction_2	35.5	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCTGTCATCTTTAAAAA	-4	True	NA	-15	True	AATAAA	-27	NA	187139496	187120946	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_187121329_187127998_187128063_187139212
H1_mix_00063572	chr3	-	750	4	FSM	ENSG00000163923.10	ENST00000433055.1	749	4	0	-1	0	1	multi-exon	FALSE	canonical	3	112	junction_2	184.588431080848	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCTGTCATCTTTAAAAA	NA	False	NA	-15	True	AATAAA	-27	NA	187180908	187120946	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_187121329_187127998_187128063_187173615_187173676_187180664
H1_mix_00063574	chr3	-	2524	3	NNC	ENSG00000163923.10	novel	749	4	NA	NA	5	-19936	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_1	132.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTTAAGCTTCAAGAAAATA	NA	False	NA	16	True	AATAAA	-38	NA	187180903	187140883	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_187143109_187173615_187173676_187180664
H1_mix_00063575	chr3	-	996	5	NNC	ENSG00000163923.10	novel	749	4	NA	NA	7	-19955	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	132.387688249323	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAATGTCAAAGTCCTC	NA	False	NA	-3	True	AATAAA	-19	NA	187180901	187140902	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_187141172_187142295_187142393_187142775_187143109_187173615_187173676_187180664
H1_mix_00063576	chr3	-	1376	4	NNC	ENSG00000163923.10	novel	749	4	NA	NA	7	-19958	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	138.516745878933	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTTAAAATGTCAAAGTC	NA	False	NA	-6	True	AATAAA	-16	NA	187180901	187140905	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_187141172_187142295_187143109_187173615_187173676_187180664
H1_mix_00063577	chr3	-	3896	11	FSM	ENSG00000127241.18	ENST00000296280.11	3894	11	0	-2	0	2	multi-exon	TRUE	canonical	2	5	junction_3	2.89136645896019	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTTATGGGTTTTGTT	529	False	187291750	2	True	AATAAA	-22	NA	187291737	187234079	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_187236568_187241480_187241556_187243483_187243622_187250250_187250330_187251633_187251753_187253167_187253316_187256663_187256861_187260740_187260873_187262542_187262721_187285824_187286057_187291627
H1_mix_00063578	chr3	-	3885	10	FSM	ENSG00000127241.18	ENST00000392472.6	3900	10	0	15	0	-15	multi-exon	FALSE	canonical	1	3	junction_9	3.62433476228891	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCGTGGATAACCAACAGCC	1	True	NA	-17	True	AATAAA	-3	NA	187291977	187234098	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_187236568_187241480_187241556_187243483_187243622_187250250_187250330_187251633_187251753_187253167_187253316_187256663_187256861_187260740_187260873_187262542_187262721_187291627
H1_mix_00063580	chr3	-	3306	10	FSM	ENSG00000113916.18	ENST00000406870.7	3306	10	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_5	4.40818542775053	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTTGGTCTGGAGGGCT	0	True	NA	-3	True	AATAAA	-17	NA	187745468	187721380	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_187722602_187724940_187725079_187725498_187725630_187726730_187726899_187728359_187728545_187729049_187730022_187731708_187731931_187733532_187733704_187734868_187734908_187745409
H1_mix_00063581	chr3	-	1869	1	FSM	ENSG00000270959.1	ENST00000605573.1	2852	1	-44	1027	-44	-1027	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATACAAAAATATGAACAT	-1	True	NA	NA	False	NA	NA	NA	188154101	188152232	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_188152200_188154100
H1_mix_00063582	chr3	-	3490	15	FSM	ENSG00000090530.10	ENST00000319332.10	3477	15	0	-13	0	13	multi-exon	FALSE	canonical	3	798	junction_5	73.5535345784252	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTCTCCCAAATGTT	1	True	NA	-1	True	AATAAA	-30	NA	190120897	189956714	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_189958005_189963957_189964099_189970815_189970892_189971889_189972008_189972873_189973025_189973908_189974005_189974557_189974686_189983045_189983141_189984549_189984591_189986787_189986878_189987526_189987670_189988906_189989039_189994093_189994284_189995289_189995443_190120251
H1_mix_00063586	chr3	-	925	3	Intergenic	novelGene_998	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	217	junction_2	15	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCACTGAGTTAAAATATG	722	False	NA	-16	True	ATTAAA	-17	NA	191927395	191915160	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_191915541_191917360_191917487_191926976
H1_mix_00063588	chr3	-	3058	5	FSM	ENSG00000114279.15	ENST00000454309.6	3058	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_4	16.8874953737966	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAAAAACACAAAA	1199	False	NA	NA	False	NA	NA	NA	192409049	192142508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_192144128_192170457_192170657_192335360_192335465_192360427_192360539_192408024
H1_mix_00063589	chr3	-	588	4	FSM	ENSG00000114279.15	ENST00000418610.1	653	4	65	0	40	0	multi-exon	FALSE	canonical	3	22	junction_3	28.7054001888146	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGAGCTTGGTTTCTGGG	108	False	NA	NA	False	NA	NA	NA	192727460	192170563	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_192170657_192335360_192335465_192360427_192360539_192727180
H1_mix_00063590	chr3	-	464	2	FSM	ENSG00000114279.15	ENST00000491636.1	546	2	15	67	0	-67	multi-exon	FALSE	canonical	3	27	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTTTTTTGGGGGGAGG	-4	True	NA	NA	False	NA	NA	NA	192727572	192726948	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_192727324_192727483
H1_mix_00063591	chr3	-	3063	2	FSM	ENSG00000180611.7	ENST00000392452.3	3063	2	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGTTGTTTGTAATC	3	True	NA	0	True	AATAAA	-25	NA	192917856	192796814	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_192799651_192917629
H1_mix_00063592	chr3	-	559	1	FSM	ENSG00000236297.1	ENST00000420064.1	602	1	59	-16	59	16	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGAGAAGATGGGTGTCCA	NA	False	NA	NA	False	NA	NA	NA	193579354	193578795	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_193578800_193579400
H1_mix_00063593	chr3	-	7451	33	FSM	ENSG00000133657.17	ENST00000645538.1	7451	33	0	0	0	0	multi-exon	TRUE	canonical	3	92	junction_31	23.7505756509184	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTTTTTTTCTGTGTCTTT	1	True	NA	-10	True	AATAAA	-21	NA	194487002	194402673	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_194406117_194413758_194413840_194419878_194419968_194425341_194425530_194427074_194427253_194428844_194428918_194429677_194429775_194430071_194430182_194430272_194430316_194430942_194431023_194431103_194431227_194431716_194431893_194433771_194433897_194437094_194437216_194437310_194437465_194437555_194437574_194438855_194438973_194441310_194441462_194444724_194444787_194446926_194447116_194447851_194448010_194448456_194448637_194450144_194450277_194453705_194453779_194454257_194454393_194455892_194455963_194457093_194457175_194459470_194459542_194459788_194459972_194460657_194460832_194462139_194462237_194485793_194485836_194486565
H1_mix_00063594	chr3	-	6954	31	NIC	ENSG00000133657.17	novel	7538	34	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_27	31.8859774125799	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACACTTTTTTTCTGTGTC	9111	False	NA	-13	True	AATAAA	-18	NA	194462212	194402676	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_194406117_194412198_194412289_194413758_194413840_194419878_194419968_194425341_194425530_194427074_194427253_194428844_194428918_194429677_194429775_194430071_194430182_194430272_194430316_194430942_194431023_194431103_194431227_194431716_194431893_194433771_194433897_194437094_194437216_194437310_194437465_194437555_194437574_194438855_194438973_194441310_194441462_194444724_194444787_194446926_194447116_194447851_194448010_194448456_194448637_194450144_194450277_194453705_194453779_194454257_194454393_194455892_194455963_194459470_194459542_194459788_194459972_194460657_194460832_194462139
H1_mix_00063595	chr3	-	7538	34	FSM	ENSG00000133657.17	ENST00000645319.2	7538	34	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_32	23.2361612991301	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACACTTTTTTTCTGTGTC	1	True	NA	-13	True	AATAAA	-18	NA	194487002	194402676	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_194406117_194412198_194412289_194413758_194413840_194419878_194419968_194425341_194425530_194427074_194427253_194428844_194428918_194429677_194429775_194430071_194430182_194430272_194430316_194430942_194431023_194431103_194431227_194431716_194431893_194433771_194433897_194437094_194437216_194437310_194437465_194437555_194437574_194438855_194438973_194441310_194441462_194444724_194444787_194446926_194447116_194447851_194448010_194448456_194448637_194450144_194450277_194453705_194453779_194454257_194454393_194455892_194455963_194457093_194457175_194459470_194459542_194459788_194459972_194460657_194460832_194462139_194462237_194485793_194485836_194486565
H1_mix_00063597	chr3	-	2363	10	FSM	ENSG00000145014.18	ENST00000347147.9	2342	10	0	-21	0	16	multi-exon	FALSE	canonical	3	35	junction_7	10.9047503523425	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGCATGAATCCCTGCACA	-29	True	NA	17	True	AATAAA	-41	NA	194633419	194587656	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_194588640_194604286_194604446_194610915_194611021_194615568_194615698_194617098_194617270_194623223_194623311_194623528_194623696_194625896_194625991_194628382_194628510_194633078
H1_mix_00063598	chr3	-	687	5	FSM	ENSG00000145014.18	ENST00000330115.3	1278	5	60	531	15	145	multi-exon	FALSE	canonical	2	4	junction_4	17.5979402203781	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATGACAGCAAGGAGGGG	97	False	NA	NA	False	NA	NA	NA	194633629	194623078	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_194623311_194623528_194623696_194625896_194625991_194628382_194628510_194633562
H1_mix_00063599	chr3	-	3286	14	FSM	ENSG00000041802.11	ENST00000265245.10	3283	14	0	-3	0	3	multi-exon	FALSE	canonical	0	0	junction_4	71.0141247721871	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCTGGTATTTCTGGT	15	True	NA	NA	False	ATTAAA	-21	NA	194672191	194640787	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_194642248_194644572_194644747_194646163_194646244_194648680_194648805_194650880_194651025_194651114_194651217_194652728_194653143_194658956_194659134_194660072_194660134_194665556_194665644_194666202_194666290_194666451_194666573_194670008_194670136_194672063
H1_mix_00063600	chr3	-	2714	4	FSM	ENSG00000173950.16	ENST00000310380.11	2714	4	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_2	8.17856276425687	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGATTCATGTTGTTT	0	True	NA	-8	True	AATAAA	-14	NA	195271159	195068283	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_195070112_195156448_195156582_195226708_195226857_195270554
H1_mix_00063602	chr3	-	7102	23	FSM	ENSG00000114331.16	ENST00000326793.11	7093	23	0	-9	0	9	multi-exon	FALSE	canonical	3	104	junction_8	25.2365666745828	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGATTTACATTTTCTTG	-8	True	NA	-5	True	AATAAA	-28	NA	195443020	195274735	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_195279429_195285795_195285858_195289120_195289232_195291705_195291816_195292264_195292453_195294718_195294812_195295707_195295893_195297189_195297282_195301574_195301645_195301965_195302175_195306510_195306617_195307222_195307324_195308785_195308838_195320700_195320814_195326884_195326960_195333027_195333124_195336931_195336977_195342470_195342655_195345258_195345318_195381008_195381063_195381902_195382023_195392089_195392148_195442794
H1_mix_00063603	chr3	-	7157	24	NIC	ENSG00000114331.16	novel	7093	23	NA	NA	27	-14	combination_of_known_junctions	FALSE	canonical	3	9	junction_7	48.2074126186001	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTCTGGCTTAGTTCTT	19	True	NA	-28	True	AATAAA	-5	NA	195442993	195274758	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_195279429_195285795_195285858_195289120_195289232_195291705_195291816_195292264_195292453_195294718_195294812_195295195_195295301_195295707_195295893_195297189_195297282_195301574_195301645_195301965_195302175_195306510_195306617_195307222_195307324_195308785_195308838_195320700_195320814_195326884_195326960_195333027_195333124_195336931_195336977_195342470_195342655_195345258_195345318_195381008_195381063_195381902_195382023_195392089_195392148_195442794
H1_mix_00063604	chr3	-	7100	24	NIC	ENSG00000114331.16	novel	7093	23	NA	NA	0	-14	combination_of_known_junctions	FALSE	canonical	3	15	junction_14	46.7748094355452	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTCTGGCTTAGTTCTT	-8	True	NA	-28	True	AATAAA	-5	NA	195443020	195274758	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_195279429_195285795_195285858_195289120_195289232_195291705_195291816_195292264_195292453_195294718_195294812_195295707_195295893_195297189_195297282_195301574_195301645_195301965_195302175_195306510_195306617_195307222_195307324_195308785_195308838_195312946_195312968_195320700_195320814_195326884_195326960_195333027_195333124_195336931_195336977_195342470_195342655_195345258_195345318_195381008_195381063_195381902_195382023_195392089_195392148_195442794
H1_mix_00063608	chr3	-	914	6	FSM	ENSG00000145113.22	ENST00000464234.5	1678	6	764	0	-127	0	multi-exon	FALSE	canonical	0	0	junction_5	1.95959179422654	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGCTGTGGCCTAGGCTA	NA	False	NA	NA	False	NA	NA	NA	195753230	195747172	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_195747381_195748901_195749065_195750888_195751113_195751206_195751272_195752372_195752447_195753050
H1_mix_00063614	chr3	-	1999	13	NIC	ENSG00000185485.14	novel	2491	17	NA	NA	0	-29	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	25.4311434181705	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGGAATAAAAATGCTAACC	NA	False	NA	NA	False	AAAAAG	-2	NA	195990305	195959776	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_195960087_195963299_195963422_195965428_195965543_195967513_195967645_195967878_195967991_195971322_195971445_195974396_195974567_195975704_195975901_195977082_195977252_195979743_195979867_195982161_195982311_195984111_195984277_195990189
H1_mix_00063615	chr3	-	1908	12	NIC	ENSG00000185485.14	novel	2000	15	NA	NA	0	23	combination_of_known_splicesites	FALSE	canonical	3	52	junction_1	21.0560056017476	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATATTTTACTGTTGT	NA	False	NA	8	True	AATAAA	-39	NA	195990305	195963080	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_195963422_195965428_195965543_195967513_195967645_195967878_195967991_195971322_195971445_195974396_195974567_195975704_195975901_195977082_195977252_195979743_195979867_195982161_195982311_195984111_195984277_195990189
H1_mix_00063616	chr3	-	2121	14	NIC	ENSG00000185485.14	novel	2000	15	NA	NA	-12	1	combination_of_known_junctions	FALSE	canonical	3	28	junction_13	23.0866646105547	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTTATTTCCAAATCC	-3	True	NA	-14	True	AATAAA	-17	NA	195990291	195963102	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_195963422_195965428_195965543_195967513_195967645_195967878_195967991_195971322_195971445_195974396_195974567_195975704_195975901_195977082_195977252_195979743_195979867_195982161_195982311_195984111_195984277_195985626_195985790_195986518_195986605_195990189
H1_mix_00063620	chr3	-	757	4	FSM	ENSG00000072274.13	ENST00000483983.5	757	4	0	0	0	0	multi-exon	FALSE	canonical	3	608	junction_3	15.1070255914995	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATCTGAACCAATACAGAG	NA	False	NA	NA	False	NA	NA	NA	196060604	196055110	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_196055302_196058283_196058366_196058573_196058633_196060179
H1_mix_00063622	chr3	-	667	4	ISM	ENSG00000163958.14	ENST00000296326.8	1308	8	3868	4	3854	-3	3prime_fragment	FALSE	canonical	3	20	junction_3	14.7044966667419	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACAACTGTCACGCTGCG	3864	False	NA	-5	True	ATTAAA	-16	NA	196207532	196197455	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_196197726_196198275_196198452_196198788_196198875_196207397
H1_mix_00063625	chr3	-	5546	9	FSM	ENSG00000161217.12	ENST00000431016.6	5546	9	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_8	16.5887763261791	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCATGTCCAGTGGTGT	-23	True	NA	-2	True	AATAAA	-21	NA	196287726	196234367	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_196238895_196239546_196239736_196241947_196242091_196242561_196242641_196247366_196247519_196248206_196248324_196257787_196257888_196270414_196270542_196287614
H1_mix_00063628	chr3	-	652	6	NNC	ENSG00000213123.11	novel	625	5	NA	NA	0	31308	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	243.943108121545	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTCCATTTATATCAT	-30	True	NA	NA	False	AAAAAG	-1	NA	196318240	196259910	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_196259942_196291222_196291375_196296005_196296070_196306942_196307013_196316097_196316232_196318039
H1_mix_00063629	chr3	-	623	6	NNC	ENSG00000213123.11	novel	800	6	NA	NA	0	11392	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	243.943108121545	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGGACTGGATAGGAGTC	-4	True	NA	NA	False	NA	NA	NA	196318214	196279826	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_196279852_196291219_196291375_196296005_196296070_196306942_196307013_196316097_196316232_196318039
H1_mix_00063630	chr3	-	723	6	NNC	ENSG00000213123.11	novel	603	5	NA	NA	-11	11392	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	222.213770950407	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGGACTGGATAGGAGTC	0	True	NA	NA	False	NA	NA	NA	196318310	196279826	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_196279852_196291219_196291375_196296005_196296070_196306942_196307013_196316097_196316232_196318035
H1_mix_00063632	chr3	-	624	5	FSM	ENSG00000213123.11	ENST00000325318.10	625	5	0	1	0	-1	multi-exon	FALSE	canonical	0	0	junction_4	216.121493609497	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTTGTGTTTTAGGCCT	-30	True	NA	-1	True	AATAAA	-24	NA	196318240	196291219	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_196291375_196296005_196296070_196306942_196307013_196316097_196316232_196318039
H1_mix_00063636	chr3	-	2529	1	ISM	ENSG00000163961.4	ENST00000318037.3	5347	6	32457	0	32366	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTATTATGTGTATTTT	NA	False	NA	-20	True	AATAAA	-17	NA	196471311	196468782	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_196468800_196471300
H1_mix_00063637	chr3	-	5362	6	FSM	ENSG00000163961.4	ENST00000318037.3	5347	6	0	-15	0	15	multi-exon	FALSE	canonical	3	13	junction_2	3.81575680566778	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTACCACAACTTAAAAA	-6	True	NA	-5	True	AATAAA	-32	NA	196503768	196468767	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_196472773_196475230_196475313_196483769_196483892_196487398_196487579_196488606_196488684_196502872
H1_mix_00063640	chr3	-	1629	4	FSM	ENSG00000185798.8	ENST00000332629.7	1594	4	7	-42	7	42	multi-exon	FALSE	canonical	3	28	junction_2	36.7695526217005	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGTTTGTTATATGTAA	6	True	NA	46	True	ATTAAA	-26	NA	196568547	196554134	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_196554808_196560995_196561492_196566876_196567308_196568518
H1_mix_00063644	chr3	-	2216	4	FSM	ENSG00000114503.11	ENST00000447325.5	2216	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	363.752968678226	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGTTGCTGCCTGTTTCC	746	False	NA	-5	True	AATAAA	-16	NA	196942377	196935405	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_196937083_196937509_196937649_196939250_196939433_196942159
H1_mix_00063645	chr3	-	2101	4	FSM	ENSG00000114503.11	ENST00000321256.10	2101	4	0	0	0	0	multi-exon	FALSE	canonical	3	779	junction_2	26.6624996744283	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGTTGCTGCCTGTTTCC	14	True	NA	-5	True	AATAAA	-16	NA	196942528	196935405	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_196937083_196937509_196937649_196939250_196939433_196942425
H1_mix_00063646	chr3	-	1946	4	FSM	ENSG00000114503.11	ENST00000427641.2	1946	4	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	346.973902316714	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTTTCAATAAAGCTGGAT	-18	True	NA	10	True	NA	NA	NA	196942560	196935433	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_196937083_196937509_196937632_196939392_196939433_196942425
H1_mix_00063647	chr3	-	2476	4	FSM	ENSG00000114503.11	ENST00000452404.6	1133	4	0	-1343	0	0	multi-exon	FALSE	canonical	3	74	junction_3	346.82015832737	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTTTCAATAAAGCTGGAT	-4	True	NA	10	True	NA	NA	NA	196942440	196935433	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_196937083_196937509_196937649_196939250_196939433_196941934
H1_mix_00063651	chr3	-	1650	7	FSM	ENSG00000163975.13	ENST00000296351.8	1650	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	4.06885187191123	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCTGTGGTTTAATTATA	23	True	NA	NA	False	CATAAA	-18	NA	197029791	197018952	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_197019802_197021403_197021472_197022956_197023114_197024302_197024486_197026659_197026760_197027755_197027911_197029653
H1_mix_00063654	chr3	-	5312	26	NIC	ENSG00000075711.21	novel	5034	26	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_25	75.2685432302233	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTTGTTAAGTGATTTT	21	True	NA	0	True	ATTAAA	-25	NA	197298109	197042559	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_197044730_197051576_197051669_197059888_197059999_197065275_197065449_197065707_197065810_197066703_197066755_197069218_197069261_197076585_197076686_197081050_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197149742_197149797_197161639_197161739_197194424_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197297672
H1_mix_00063655	chr3	-	5034	26	FSM	ENSG00000075711.21	ENST00000346964.6	5034	26	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_25	69.1742611091727	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTTGTTAAGTGATTTT	730	False	NA	0	True	ATTAAA	-25	NA	197298576	197042559	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_197044730_197051576_197051669_197059888_197059999_197065275_197065449_197065707_197065810_197066703_197066755_197069218_197069261_197076585_197076686_197081050_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197149742_197149797_197161639_197161739_197194424_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197298417
H1_mix_00063657	chr3	-	4973	25	FSM	ENSG00000075711.21	ENST00000670455.1	4693	25	-275	-5	-3	0	multi-exon	FALSE	canonical	3	99	junction_24	55.5569652598924	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAAAATCCATATGTTAAG	12	True	NA	-11	True	AATAAA	-7	NA	197298118	197042937	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_197044730_197051576_197051669_197059888_197059999_197065275_197065449_197065707_197065810_197066703_197066755_197069218_197069261_197076585_197076686_197081050_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197149742_197149797_197194424_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197297543
H1_mix_00063658	chr3	-	5182	25	FSM	ENSG00000075711.21	ENST00000669565.1	4574	25	-265	-343	-3	0	multi-exon	FALSE	canonical	0	0	junction_24	69.2720958531564	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATTTATATATTAAAATTT	12	True	NA	-40	True	TATAAA	-7	NA	197298118	197042599	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_197044730_197051576_197051669_197059888_197059999_197065275_197065449_197065707_197065810_197066703_197066755_197069218_197069261_197076585_197076686_197081050_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197149742_197149797_197194424_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197297672
H1_mix_00063660	chr3	-	4641	25	NNC	ENSG00000075711.21	novel	4574	25	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	85.6233576484828	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAAAATCCATATGTTAAG	1395	False	NA	-11	True	AATAAA	-7	NA	197297911	197042937	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_197044730_197051576_197051669_197059888_197059999_197065275_197065449_197065707_197065810_197066703_197066755_197069218_197069261_197076581_197076686_197081050_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197149742_197149797_197194424_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197297672
H1_mix_00063661	chr3	-	4861	24	NIC	ENSG00000075711.21	novel	4693	25	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_4	86.9984029577685	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAAAATCCATATGTTAAG	14	True	NA	-11	True	AATAAA	-7	NA	197298044	197042937	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_197044730_197051576_197051669_197059888_197059999_197065275_197065465_197065707_197065810_197066703_197066755_197069218_197069261_197076585_197076686_197081050_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197194424_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197297543
H1_mix_00063667	chr3	-	3898	25	NIC	ENSG00000075711.21	novel	3095	21	NA	NA	19	36	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	89.1517024047588	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGAAATGCTCTGGGATT	34	True	NA	NA	False	AATAAA	-27	NA	197298096	197046195	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_197047067_197051576_197051669_197059888_197059999_197065275_197065449_197065707_197065810_197066703_197066755_197069218_197069261_197076585_197076683_197081050_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197149742_197149797_197194424_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197297672
H1_mix_00063671	chr3	-	4055	8	FSM	ENSG00000161267.12	ENST00000392379.6	3527	8	-198	-330	-118	330	multi-exon	FALSE	canonical	3	17	junction_6	56.9679465908287	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTCACACCTGTCATCC	NA	False	NA	NA	False	NA	NA	NA	197556166	197509452	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_197512365_197514263_197514417_197522639_197522782_197532411_197532523_197533488_197533562_197546360_197546487_197554561_197554714_197555780
H1_mix_00063672	chr3	-	868	6	FSM	ENSG00000161267.12	ENST00000446746.5	868	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	54.0718041126797	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGCCATCGCCAAGAAGAT	2	True	NA	NA	False	NA	NA	NA	197555972	197512167	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_197512365_197514263_197514417_197522639_197522782_197532411_197532523_197533488_197533562_197555780
H1_mix_00063675	chr3	-	4968	6	NIC	ENSG00000214135.9	novel	2435	7	NA	NA	-4	141	intron_retention	FALSE	canonical	3	31	junction_3	27.5288939116703	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACACTTAGGTTGCTTCC	-8	True	NA	NA	False	NA	NA	NA	197627888	197611389	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_197615686_197619739_197619889_197621703_197621869_197623219_197623383_197624111_197624198_197627779
H1_mix_00063676	chr3	-	1534	8	FSM	ENSG00000214135.9	ENST00000418868.6	1555	8	21	0	-4	0	multi-exon	FALSE	canonical	3	23	junction_1	29.3146198811363	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTCTCAGATATTCAGGG	-8	True	NA	NA	False	AATAAA	-20	NA	197627888	197614026	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_197614623_197615563_197615686_197619739_197619889_197621703_197621869_197622186_197622331_197623219_197623383_197624111_197624198_197627779
H1_mix_00063681	chr3	-	2457	3	ISM	ENSG00000145016.16	ENST00000415452.5	2665	14	2878	17907	1937	293	internal_fragment	FALSE	canonical	3	38	junction_2	1.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCAGGAGTTTGAGACCT	2915	False	NA	NA	False	NA	NA	NA	197698832	197694123	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_197694586_197695865_197695982_197696953
H1_mix_00063682	chr3	-	555	1	FSM	ENSG00000234742.1	ENST00000452862.1	555	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCAGCATTAAAATAAATG	31	False	NA	NA	False	AAGAAA	-34	NA	197850954	197850399	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_197850400_197851000
H1_mix_00063683	chr3	-	1570	4	FSM	ENSG00000114473.14	ENST00000478903.5	1481	4	-35	-54	-35	53	multi-exon	FALSE	canonical	3	39	junction_3	5.43650214343336	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCAGTTGTAAGCTGCTTC	NA	False	NA	42	True	AATACA	-2	NA	197913319	197889023	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_197889715_197891445_197891548_197892627_197892760_197912674
H1_mix_00063684	chr3	-	2014	11	FSM	ENSG00000114473.14	ENST00000455191.5	1981	11	20	-53	20	53	multi-exon	FALSE	canonical	3	39	junction_3	3.78021163428716	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCAGTTGTAAGCTGCTTC	0	True	NA	42	True	AATACA	-2	NA	197949905	197889023	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_197889715_197891445_197891548_197892627_197892760_197912674_197912750_197913880_197914043_197926023_197926106_197932173_197932303_197938547_197938781_197943777_197944052_197945619_197945687_197949838
H1_mix_00063685	chr3	+	292	1	Intergenic	novelGene_873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAATGCCCTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	2617430	2617722	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_2617400_2617700
H1_mix_00063686	chr3	+	2133	1	Intergenic	novelGene_876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTACAAAGGACATGAACTC	NA	False	NA	NA	False	NA	NA	NA	10295591	10297724	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_10295600_10297700
H1_mix_00063687	chr3	+	475	1	Intergenic	novelGene_879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTCCCTCCTCTTT	NA	False	NA	NA	False	GATAAA	-14	NA	17861448	17861923	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_17861400_17861900
H1_mix_00063688	chr3	+	3048	1	Intergenic	novelGene_880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCCATTCTATGACAAAGC	NA	False	NA	NA	False	AATAAA	-13	NA	20164085	20167133	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_20164100_20167100
H1_mix_00063689	chr3	+	301	1	Intergenic	novelGene_881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAAAATCTTATCCCCAAA	NA	False	NA	NA	False	NA	NA	NA	27630246	27630547	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_27630200_27630500
H1_mix_00063690	chr3	+	299	1	Intergenic	novelGene_882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGTGAGCAATTTTAAAG	NA	False	NA	NA	False	NA	NA	NA	30084681	30084980	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_30084700_30085000
H1_mix_00063694	chr3	+	285	1	Intergenic	novelGene_894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	42744522	42744807	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_42744500_42744800
H1_mix_00063696	chr3	+	471	1	Intergenic	novelGene_897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATGTGTAGAAGTAAATAA	1503	False	NA	NA	False	NA	NA	NA	46576037	46576508	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_46576000_46576500
H1_mix_00063698	chr3	+	813	1	Intergenic	novelGene_901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAACCACACAGACAAACAG	NA	False	NA	NA	False	TTTAAA	-35	NA	64330482	64331295	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_64330500_64331300
H1_mix_00063699	chr3	+	2209	1	Intergenic	novelGene_903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGAAAAATGGGGACCAG	3100	False	NA	NA	False	NA	NA	NA	71230687	71232896	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_71230700_71232900
H1_mix_00063700	chr3	+	835	1	Intergenic	novelGene_908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGATGCTTCATGCCCTC	2	True	NA	NA	False	NA	NA	NA	76049428	76050263	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_76049400_76050300
H1_mix_00063701	chr3	+	615	1	Intergenic	novelGene_909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATCATTGCAGGGACGC	NA	False	NA	NA	False	NA	NA	NA	78323836	78324451	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_78323800_78324500
H1_mix_00063702	chr3	+	427	1	Intergenic	novelGene_911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAATGTCAGGTGGATCA	NA	False	NA	NA	False	NA	NA	NA	78584519	78584946	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_78584500_78584900
H1_mix_00063703	chr3	+	253	1	Intergenic	novelGene_913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTATATGGGTTTGGCAC	NA	False	NA	NA	False	NA	NA	NA	78585422	78585675	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_78585400_78585700
H1_mix_00063704	chr3	+	773	1	Intergenic	novelGene_917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAAGGTTACTGCCACT	NA	False	NA	NA	False	NA	NA	NA	94505717	94506490	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_94505700_94506500
H1_mix_00063705	chr3	+	431	1	Intergenic	novelGene_918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTTCACATGGACGCACA	6092	False	NA	26	True	AATAAA	-32	NA	98396742	98397173	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_98396700_98397200
H1_mix_00063708	chr3	+	215	1	Intergenic	novelGene_924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTATTACAAGGACATTTTC	NA	False	NA	NA	False	NA	NA	NA	112696319	112696534	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_112696300_112696500
H1_mix_00063712	chr3	+	268	1	Intergenic	novelGene_934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTGTGGTTTTAAGCTA	NA	False	NA	NA	False	NA	NA	NA	124027370	124027638	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_124027400_124027600
H1_mix_00063713	chr3	+	2402	1	Intergenic	novelGene_935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTTCCACTATTTCTGT	NA	False	NA	12	True	AATAAA	-17	NA	124749724	124752126	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_124749700_124752100
H1_mix_00063714	chr3	+	2207	1	Intergenic	novelGene_937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCAGTTGCTATTCAATGG	NA	False	NA	NA	False	NA	NA	NA	125349198	125351405	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_125349200_125351400
H1_mix_00063715	chr3	+	6506	1	Intergenic	novelGene_940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTGATAAATGCAGCATGA	NA	False	NA	NA	False	NA	NA	NA	126450713	126457219	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_126450700_126457200
H1_mix_00063717	chr3	+	2357	1	Intergenic	novelGene_942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTTCCCATGACATTG	NA	False	NA	NA	False	ACTAAA	-21	NA	130086019	130088376	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_130086000_130088400
H1_mix_00063718	chr3	+	314	1	Intergenic	novelGene_945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCAGGTAGTAAACATTTT	NA	False	NA	NA	False	NA	NA	NA	141826277	141826591	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_141826300_141826600
H1_mix_00063719	chr3	+	296	1	Intergenic	novelGene_947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTCTACAAAACAACAACTC	NA	False	NA	NA	False	NA	NA	NA	148417556	148417852	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_148417600_148417900
H1_mix_00063720	chr3	+	813	1	Intergenic	novelGene_949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCATTGAGCTCCTTTCT	NA	False	NA	NA	False	ACTAAA	-34	NA	148984174	148984987	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_148984200_148985000
H1_mix_00063721	chr3	+	1323	1	Intergenic	novelGene_957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACAGCACTGGGTCTTGT	NA	False	NA	NA	False	NA	NA	NA	158258208	158259531	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_158258200_158259500
H1_mix_00063722	chr3	+	223	1	Intergenic	novelGene_980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGTGATATTGTGGGGAC	NA	False	NA	NA	False	NA	NA	NA	166822973	166823196	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_166823000_166823200
H1_mix_00063724	chr3	+	302	1	Intergenic	novelGene_983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGCTTTTTTGGGGTCA	NA	False	NA	NA	False	NA	NA	NA	170622086	170622388	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_170622100_170622400
H1_mix_00063725	chr3	+	242	1	Intergenic	novelGene_984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCTAGTGCCAACTTAGA	NA	False	NA	NA	False	TTTAAA	-17	NA	171578859	171579101	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_171578900_171579100
H1_mix_00063726	chr3	+	697	1	Intergenic	novelGene_985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTCTTTCAGCTGTACTC	NA	False	NA	NA	False	NA	NA	NA	171579501	171580198	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_171579500_171580200
H1_mix_00063727	chr3	+	240	1	Intergenic	novelGene_987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	347	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTCAGAATTCAGGCCT	NA	False	NA	NA	False	AAAAAG	-27	NA	171580772	171581012	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_171580800_171581000
H1_mix_00063728	chr3	+	217	1	Intergenic	novelGene_989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGCTGCAAGGCTTCAC	NA	False	NA	NA	False	NA	NA	NA	175830831	175831048	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_175830800_175831000
H1_mix_00063729	chr3	+	10415	1	Antisense	novelGene_ENSG00000288895.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATCATATATGATACATAT	NA	False	NA	NA	False	NA	NA	NA	176287128	176297543	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr3_+_176287100_176297500
H1_mix_00063730	chr3	+	278	1	Intergenic	novelGene_991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	183152894	183153172	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_183152900_183153200
H1_mix_00063733	chr3	+	1487	1	Intergenic	novelGene_992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCGTTGTTAAACTTCTTAG	NA	False	NA	NA	False	NA	NA	NA	188582156	188583643	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_188582200_188583600
H1_mix_00063734	chr3	+	306	1	Intergenic	novelGene_993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	668	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATACTATTGTCAGTATGC	NA	False	NA	NA	False	AAAAAG	-9	NA	190201553	190201859	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_190201600_190201900
H1_mix_00063735	chr3	+	333	1	Intergenic	novelGene_994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAACCAACACCAAACAGGTA	NA	False	NA	72	True	AATAAA	-10	NA	190424649	190424982	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_190424600_190425000
H1_mix_00063738	chr3	+	203	1	Intergenic	novelGene_997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCTGACTTCTGAGAAGG	NA	False	NA	NA	False	NA	NA	NA	191896258	191896461	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_191896300_191896500
H1_mix_00063739	chr3	+	258	1	Intergenic	novelGene_1000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCTATATTTTGATTTTA	NA	False	NA	NA	False	ACTAAA	-28	NA	193155168	193155426	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_193155200_193155400
H1_mix_00063740	chr3	+	2651	6	FSM	ENSG00000144619.15	ENST00000484686.1	3064	6	413	0	413	0	multi-exon	FALSE	canonical	2	7	junction_1	1.46969384566991	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAAGATACTTGTCTTTC	NA	False	NA	4	True	AATAAA	-13	NA	3040036	3057953	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_3040272_3042309_3042423_3042976_3043164_3043591_3043705_3053806_3053976_3056119
H1_mix_00063742	chr3	+	1136	7	FSM	ENSG00000072756.17	ENST00000651093.1	1113	7	-23	0	0	0	multi-exon	FALSE	canonical	1	14	junction_5	130.212219941994	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGGTTACCAAATGGAAAAA	-13	True	NA	NA	False	AAGAAA	-43	NA	3126939	3148101	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_3126991_3129013_3129189_3137259_3137454_3140509_3140649_3144583_3144711_3147449_3147704_3147905
H1_mix_00063744	chr3	+	1946	7	FSM	ENSG00000072756.17	ENST00000650755.1	1934	7	-12	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	137.088069826987	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTTTAAAGTGTTATTT	-13	True	NA	-44	True	NA	NA	NA	3126939	3148911	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_3126991_3129013_3129189_3140509_3140649_3144583_3144711_3146429_3146624_3147449_3147704_3147905
H1_mix_00063745	chr3	+	869	4	FSM	ENSG00000072756.17	ENST00000420393.5	854	4	-15	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	18.1903515328563	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTGGGGAGCTTTTAAAG	12	True	NA	NA	False	NA	NA	NA	3126964	3130214	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_3127290_3127945_3128019_3129013_3129189_3129918
H1_mix_00063747	chr3	+	2147	7	FSM	ENSG00000072756.17	ENST00000650839.1	2147	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	138.574488593279	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTATATATTCTCTAAAGA	1948	False	NA	0	True	ATTAAA	-14	NA	3129013	3148955	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_3129189_3137259_3137454_3140509_3140649_3144583_3144711_3146415_3146624_3147449_3147704_3147905
H1_mix_00063748	chr3	+	2751	8	NIC	ENSG00000072756.17	novel	1871	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	30	junction_7	119.738831442027	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTGTCTGGACTTATTT	1948	False	NA	NA	False	NA	NA	NA	3129013	3150879	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_3129189_3137259_3137454_3140509_3140649_3144583_3144711_3146429_3146624_3147449_3147704_3147905_3149234_3150539
H1_mix_00063749	chr3	+	447	3	FSM	ENSG00000072756.17	ENST00000482311.1	447	3	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_1	13.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAACTTGAGAAGTTGCA	2089	False	NA	NA	False	AGTAAA	-21	NA	3129154	3140728	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_3129189_3137259_3137454_3140509
H1_mix_00063750	chr3	+	231	2	FSM	ENSG00000150995.21	ENST00000650079.1	4740	2	769	3740	769	-1642	multi-exon	FALSE	canonical	3	6	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGGTAGGGTGGAGAAA	NA	False	NA	NA	False	NA	NA	NA	4645386	4645728	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_4645471_4645581
H1_mix_00063751	chr3	+	390	3	FSM	ENSG00000150995.21	ENST00000650146.1	1364	3	0	974	0	-974	multi-exon	FALSE	canonical	2	4	junction_1	1	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAACAATGATGTGGAGAAG	NA	False	NA	NA	False	AATAAA	-2	NA	4673293	4675221	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_4673388_4674201_4674344_4675067
H1_mix_00063752	chr3	+	3010	5	FSM	ENSG00000134107.5	ENST00000256495.4	3152	5	0	142	0	-142	multi-exon	FALSE	canonical	2	4	junction_3	2.27760839478607	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTCTCCTGAGTTTTTT	-25	True	NA	23	True	AATAAA	-27	NA	4979436	4985181	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_4979799_4979961_4980032_4980300_4980409_4981391_4981516_4982835
H1_mix_00063753	chr3	+	820	2	FSM	ENSG00000134108.14	ENST00000444332.1	732	2	-22	-66	21	66	multi-exon	FALSE	canonical	3	237	junction_1	0	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAGGCGTGAGCCACCAC	NA	False	NA	NA	False	NA	NA	NA	5122269	5171003	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_5122589_5170502
H1_mix_00063754	chr3	+	1430	5	FSM	ENSG00000071282.12	ENST00000426878.2	1431	5	0	1	0	-1	multi-exon	FALSE	canonical	1	1	junction_4	36.4451642882838	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGAGGGCCGGACTCTTTC	218	False	NA	NA	False	NA	NA	NA	8501806	8550448	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_8501981_8532736_8532826_8537184_8537441_8548567_8548904_8549873
H1_mix_00063756	chr3	+	730	2	FSM	ENSG00000134077.16	ENST00000417036.1	730	2	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACTGTACCTACTGGCT	NA	False	NA	NA	False	NA	NA	NA	9362970	9365190	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9363526_9365015
H1_mix_00063760	chr3	+	6942	23	FSM	ENSG00000168137.20	ENST00000402198.7	6931	23	-11	0	-11	0	multi-exon	FALSE	canonical	3	16	junction_21	112.695789225201	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTGTCCAATTTTGTG	-22	True	NA	25	True	AATAAA	-33	NA	9397603	9478154	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9397978_9424466_9424527_9428822_9429010_9433844_9433951_9434333_9434486_9434823_9434883_9435727_9435907_9440455_9440699_9441592_9441742_9442127_9442246_9443307_9443418_9445047_9445301_9445656_9445741_9447049_9447308_9447685_9448007_9448387_9448631_9453738_9453869_9464424_9464673_9470458_9470930_9473235_9473538_9474448_9474583_9475067_9475157_9475482
H1_mix_00063761	chr3	+	1374	10	NIC	ENSG00000168137.20	novel	5823	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	87	junction_7	82.6854817297988	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCACCAAAGGGTTGAG	-8	True	NA	NA	False	NA	NA	NA	9397855	9440698	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_9397978_9424466_9424527_9428822_9429010_9429826_9430052_9433844_9433951_9434333_9434486_9434589_9434631_9434823_9434883_9435727_9435907_9440455
H1_mix_00063766	chr3	+	1415	4	FSM	ENSG00000168137.20	ENST00000468208.2	1415	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	108.90668788769	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGACTGCGCTGTCTC	NA	False	NA	15	True	AATAAA	-17	NA	9423107	9430831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9423258_9424466_9424540_9428822_9429010_9429826
H1_mix_00063771	chr3	+	2441	18	NIC	ENSG00000163719.20	novel	2452	19	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	3	100	junction_8	169.963704653829	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTGTGTCATCATTTGG	NA	False	NA	23	True	AATAAA	-23	NA	9649439	9702392	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_9649743_9653620_9653770_9662266_9662376_9668718_9668795_9669431_9669493_9671047_9671171_9672684_9672759_9677316_9677388_9683177_9683245_9684584_9684671_9684887_9684965_9685210_9685248_9687820_9687892_9688695_9688755_9688943_9689083_9689963_9690144_9697710_9697867_9701789
H1_mix_00063772	chr3	+	2337	18	NIC	ENSG00000163719.20	novel	2452	19	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_16	167.763323977478	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGTGTCATCATTTGGT	NA	False	NA	24	True	AATAAA	-24	NA	9649439	9702393	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_9649743_9653620_9653770_9662266_9662376_9668718_9668795_9669431_9669493_9671047_9671171_9672684_9672759_9677316_9677388_9677983_9678059_9683177_9683245_9684584_9684671_9684887_9684965_9685210_9685248_9687820_9687892_9688695_9688755_9688943_9689083_9697710_9697867_9701789
H1_mix_00063773	chr3	+	2966	1	FSM	ENSG00000163719.20	ENST00000606184.1	2966	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTGTGTCATCATTTGG	NA	False	NA	23	True	AATAAA	-23	NA	9699426	9702392	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9699400_9702400
H1_mix_00063774	chr3	+	4604	14	FSM	ENSG00000156983.17	ENST00000424362.7	4604	14	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_6	23.0612767471166	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATAAACTGTCAATTTA	87	False	NA	5	True	AATATA	-11	NA	9731847	9747992	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9732139_9734130_9734740_9738998_9739959_9740778_9740942_9741307_9741440_9742024_9742172_9742943_9743254_9743580_9743902_9744223_9744509_9745007_9745156_9745572_9745710_9745811_9745931_9746299_9746455_9747165
H1_mix_00063776	chr3	+	3577	7	FSM	ENSG00000114026.22	ENST00000302003.11	1655	7	14	-1936	6	1936	multi-exon	FALSE	canonical	3	21	junction_6	63.6832439151427	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATGAATGAAGTCCTTCA	-17	True	NA	NA	False	AATAGA	-34	NA	9749957	9759343	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9754703_9754886_9756470_9756622_9756766_9756817_9757043
H1_mix_00063777	chr3	+	2176	6	NIC	ENSG00000114026.22	novel	2220	7	NA	NA	66	-19	intron_retention	FALSE	canonical	3	26	junction_5	59.911267721523	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTAACTGATTAAAGAGGA	59	False	NA	5	True	AATAAA	-14	NA	9750420	9766649	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_9751193_9751769_9751950_9754703_9754886_9756470_9756622_9756766_9756817_9765808
H1_mix_00063780	chr3	+	2097	6	FSM	ENSG00000214021.17	ENST00000430793.1	2097	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	9.47417542586161	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTCCTGGATCCAACA	1335	False	NA	-39	True	NA	NA	NA	9820293	9835358	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9820742_9825799_9825949_9826996_9827241_9828959_9829396_9833103_9833246_9834680
H1_mix_00063789	chr3	+	2209	2	FSM	ENSG00000163703.20	ENST00000684659.1	2198	2	-14	3	0	2	multi-exon	FALSE	canonical	3	124	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATTGGTCATTTTCTCT	-17	True	NA	1	True	AATAAA	-16	NA	9933824	9936255	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9934613_9934834
H1_mix_00063791	chr3	+	2205	12	FSM	ENSG00000163703.20	ENST00000683603.1	2192	12	-13	0	0	0	multi-exon	FALSE	canonical	3	9	junction_10	40.7057573039239	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTATTCATCTCAGGAA	-17	True	NA	-25	True	NA	NA	NA	9933824	9944985	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9933921_9934419_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076_9943173_9943380_9943516_9943674_9944096_9944364
H1_mix_00063792	chr3	+	2872	9	FSM	ENSG00000163703.20	ENST00000682798.1	2863	9	-9	0	0	0	multi-exon	FALSE	canonical	3	90	junction_3	13.8991906239176	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATAAAAGTGTGGTCGCC	-17	True	NA	-19	True	ATTAAA	-44	NA	9933824	9945366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076_9943516_9944364
H1_mix_00063794	chr3	+	2373	10	FSM	ENSG00000163703.20	ENST00000682771.1	2373	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	43.1354455948547	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTCATCTCAGGAAATAAA	354	False	NA	-20	True	NA	NA	NA	9934419	9944990	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941017_9941110_9941207_9942812_9942897_9943076_9943173_9943380_9943516_9943674
H1_mix_00063798	chr3	+	332	3	NNC	ENSG00000180385.9	novel	564	2	NA	NA	-5718	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	6	70	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTTCTTGCAAATCTTGTA	1798	False	NA	23	True	AATAAA	-21	NA	9998549	10006991	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_9998573_9998775_9998900_10006806
H1_mix_00063800	chr3	+	1304	8	FSM	ENSG00000144554.13	ENST00000431693.1	2450	8	5	1141	5	-263	multi-exon	FALSE	canonical	3	97	junction_3	16.0038260731486	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACCATGATCCCTTAAGT	2176	False	NA	NA	False	NA	NA	NA	10028624	10040421	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_10028722_10032831_10032973_10034468_10034537_10034694_10034799_10035172_10035234_10036286_10036340_10039278_10039358_10039720
H1_mix_00063802	chr3	+	3559	30	FSM	ENSG00000144554.13	ENST00000681997.1	3559	30	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	27.3736639708943	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTCCTGAGTATCTCGAG	423	False	NA	5	True	AAGAAA	-20	NA	10045526	10099009	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_10045745_10046579_10046724_10047916_10048052_10049373_10049506_10052386_10052498_10060293_10060404_10062150_10062212_10063791_10063912_10064355_10064430_10064728_10064876_10065393_10065495_10065863_10065980_10067208_10067318_10072870_10072982_10073252_10073363_10074529_10074674_10078080_10078198_10081099_10081229_10081345_10081465_10085811_10085923_10087133_10087265_10088448_10088543_10088827_10088951_10090291_10090386_10092180_10092253_10093284_10093324_10094288_10094364_10095199_10095275_10096325_10096473_10098719
H1_mix_00063804	chr3	+	2708	2	FSM	ENSG00000134086.8	ENST00000345392.2	2696	2	-12	0	-2	0	multi-exon	FALSE	canonical	3	16	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGCCGGGCATGGTGGCT	-26	True	NA	NA	False	NA	NA	NA	10141775	10152082	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_10142188_10149786
H1_mix_00063805	chr3	+	3016	7	ISM	ENSG00000157014.11	ENST00000448281.7	4937	8	19	2059	19	-6	5prime_fragment	FALSE	canonical	3	34	junction_1	14.3923204831219	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGATTTGTTTTGAGTGA	-12	True	NA	21	True	TATAAA	-18	NA	10248477	10279159	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_10249068_10249194_10249615_10260136_10260671_10270130_10271016_10276360_10276489_10278278_10278463_10278884
H1_mix_00063806	chr3	+	1704	4	FSM	ENSG00000240288.8	ENST00000439539.3	1708	4	4	0	4	0	multi-exon	FALSE	canonical	1	3	junction_3	2.16024689946929	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTAGTTGGTTTAGCAAG	NA	False	NA	2	True	NA	NA	NA	10285757	10293449	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_10285854_10287413_10287482_10287944_10288103_10292067
H1_mix_00063807	chr3	+	2986	2	FSM	ENSG00000240288.8	ENST00000662597.1	2986	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCGTAGTACATTTATCAAA	NA	False	NA	NA	False	NA	NA	NA	10287956	10294903	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_10288107_10292067
H1_mix_00063808	chr3	+	616	4	FSM	ENSG00000132164.10	ENST00000454147.1	2794	4	150	2028	123	-2028	multi-exon	FALSE	canonical	2	4	junction_2	1.69967317119759	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAAAAGCCTGATCCTT	123	False	NA	NA	False	GGGGCT	-38	NA	10816350	10823470	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_10816522_10819464_10819600_10819711_10819853_10823301
H1_mix_00063810	chr3	+	430	4	FSM	ENSG00000197548.13	ENST00000427759.5	455	4	1	24	0	-24	multi-exon	FALSE	canonical	1	2	junction_3	50.2946871503895	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGATAAAATAAAATGTAAAT	NA	False	NA	NA	False	NA	NA	NA	11364658	11477283	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_11364735_11379971_11380053_11426803_11426927_11477133
H1_mix_00063811	chr3	+	251	3	ISM	ENSG00000230342.2	ENST00000437591.1	1400	14	23347	7158	23347	-7158	internal_fragment	FALSE	canonical	3	30	junction_2	7	245	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCATAAACCTCCTGCCGC	NA	False	NA	NA	False	NA	NA	NA	11883020	11884014	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_11883135_11883578_11883653_11883951
H1_mix_00063812	chr3	+	353	1	FSM	ENSG00000225026.1	ENST00000419844.1	272	1	5	-86	5	86	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCCTGATGGATGCTTT	NA	False	NA	NA	False	NA	NA	NA	12328007	12328360	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_12328000_12328400
H1_mix_00063813	chr3	+	1098	3	FSM	ENSG00000132170.24	ENST00000682125.1	1672	3	574	0	574	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTGATAGTATTTGAAGA	NA	False	NA	NA	False	ATTAAA	-19	NA	12405881	12434344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_12406082_12416703_12417155_12433897
H1_mix_00063814	chr3	+	2902	5	FSM	ENSG00000154743.19	ENST00000679537.1	2913	5	11	0	3	0	multi-exon	FALSE	canonical	3	81	junction_1	24.1389208540896	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAAACTCTGTCTCAAA	NA	False	NA	NA	False	NA	NA	NA	12484445	12505766	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261
H1_mix_00063817	chr3	+	2362	11	FSM	ENSG00000154743.19	ENST00000679756.1	2373	11	11	0	3	0	multi-exon	FALSE	canonical	3	6	junction_6	36.5069856328895	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGTCCTGTCTCAAAAAAAA	NA	False	NA	NA	False	AATAGA	-4	NA	12484445	12533647	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
H1_mix_00063818	chr3	+	3417	11	FSM	ENSG00000154743.19	ENST00000681713.1	3442	11	25	0	3	0	multi-exon	FALSE	canonical	3	61	junction_6	25.3229145242012	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCCTGTCTCAAAAAAAAAA	NA	False	NA	NA	False	AATAGA	-6	NA	12484445	12533649	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569
H1_mix_00063823	chr3	+	1025	7	FSM	ENSG00000163517.15	ENST00000402271.5	1018	7	-7	0	-7	0	multi-exon	FALSE	canonical	3	19	junction_1	29.7078366017379	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGAAGGGCTTGAGGCCT	-7	True	NA	NA	False	NA	NA	NA	13480295	13504849	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_13480350_13481245_13481395_13483463_13483565_13501870_13501934_13502883_13502981_13504093_13504273_13504467
H1_mix_00063824	chr3	+	583	7	FSM	ENSG00000163517.15	ENST00000458642.5	574	7	-9	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	25.4127046092217	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGGAGCTGCACAGCTC	21	True	NA	NA	False	NA	NA	NA	13480323	13501699	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_13480350_13481245_13481395_13483463_13483565_13496735_13496853_13498512_13498556_13500712_13500790_13501629
H1_mix_00063825	chr3	+	1688	8	NIC	ENSG00000163517.15	novel	2766	9	NA	NA	8	78	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	35.1829040116628	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCAGTGCAAGGGGCAGG	6	True	NA	85	True	NA	NA	NA	13480351	13505412	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_13480447_13481245_13481395_13496735_13496853_13498512_13498556_13501870_13501934_13502883_13502981_13504093_13504273_13504467
H1_mix_00063828	chr3	+	460	6	FSM	ENSG00000163517.15	ENST00000498532.5	565	6	105	0	105	0	multi-exon	FALSE	canonical	3	50	junction_2	13.3775932065525	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGGAGTGGGGCACAGA	NA	False	NA	NA	False	NA	NA	NA	13496692	13504113	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_13496853_13498512_13498556_13500712_13500790_13501870_13501934_13502883_13502981_13504093
H1_mix_00063829	chr3	+	4023	16	NIC	ENSG00000163520.14	novel	4127	17	NA	NA	-4	-5	intron_retention	FALSE	canonical	2	10	junction_13	52.7343868415625	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAGGGTTATAAAGTAAC	-5	True	NA	-23	True	TATAAA	-41	NA	13549120	13638375	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_13549209_13570314_13571662_13608061_13608174_13609512_13609643_13613983_13614165_13618075_13618286_13618903_13619018_13619729_13619832_13626444_13626580_13627831_13627970_13628904_13629049_13629163_13629293_13629819_13629946_13631328_13631458_13636444_13636569_13637561
H1_mix_00063831	chr3	+	5761	19	FSM	ENSG00000154783.12	ENST00000543601.5	5768	19	0	7	0	-7	multi-exon	TRUE	canonical	3	11	junction_17	15.0379150446094	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTCACACTAAGTGATTA	8265	False	NA	61	True	ATTAAA	-12	NA	14818961	14934558	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_14821597_14864127_14864261_14880571_14880631_14880741_14880773_14897508_14897670_14897938_14898096_14898738_14898827_14900402_14900454_14901002_14901062_14907639_14907712_14910860_14910930_14917248_14917333_14918753_14918834_14921917_14922018_14922410_14922549_14923045_14923176_14924007_14924139_14932576_14932732_14933130
H1_mix_00063840	chr3	+	4341	5	FSM	ENSG00000144597.14	ENST00000449565.1	1037	5	-31	-3273	-31	0	multi-exon	FALSE	canonical	3	7	junction_2	37.2860563750043	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTCTTGGTGGGTTT	-26	True	NA	12	True	AATAAA	-20	NA	15427566	15442613	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_15427883_15429912_15430008_15434347_15434539_15436341_15436576_15439108
H1_mix_00063842	chr3	+	2004	10	FSM	ENSG00000154814.14	ENST00000442255.5	1994	10	-10	0	-5	0	multi-exon	FALSE	canonical	1	2	junction_5	56.4074682035615	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATCTTAATAATTT	-18	True	NA	NA	False	AATGAA	-11	NA	16265196	16303983	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_16265506_16269125_16269276_16270944_16271072_16271658_16271723_16272144_16272322_16286341_16286449_16294855_16294998_16301625_16301869_16302639_16302749_16303407
H1_mix_00063846	chr3	+	878	1	FSM	ENSG00000271964.1	ENST00000607464.1	549	1	-242	-87	-242	87	mono-exon	FALSE	NA	NA	NA	NA	NA	875	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACATTTTGCTCTATAA	973	False	NA	-27	True	AAAAAG	-25	NA	16314196	16315074	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_16314200_16315100
H1_mix_00063847	chr3	+	664	3	NNC	ENSG00000274840.4	novel	307	3	NA	NA	-152324	-27168	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	2	28	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCTACATTATGGTGAG	NA	False	NA	NA	False	AAAACA	-17	NA	17860901	18014373	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_17861403_18013654_18013775_18014330
H1_mix_00063849	chr3	+	1130	5	FSM	ENSG00000228956.9	ENST00000598149.6	1131	5	0	1	0	-1	multi-exon	FALSE	canonical	3	18	junction_1	7.39509972887452	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACTTCCTATTTATTGTT	235	False	NA	NA	False	AATAAA	-18	NA	18445236	18469713	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_18445443_18463479_18463546_18464286_18464340_18465962_18466040_18468985
H1_mix_00063850	chr3	+	831	4	FSM	ENSG00000228956.9	ENST00000631076.2	831	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	5.65685424949238	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGCATAAAAGGAGTCAAAAG	NA	False	NA	NA	False	TATAAA	-38	NA	18465982	18530447	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_18466040_18526386_18526541_18527173_18527327_18529980
H1_mix_00063852	chr3	+	753	2	FSM	ENSG00000144566.11	ENST00000443878.1	753	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAATATGCCAGTTCAAA	0	True	NA	NA	False	NA	NA	NA	19947249	19950944	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_19947864_19950805
H1_mix_00063853	chr3	+	826	4	FSM	ENSG00000144566.11	ENST00000469122.5	918	4	0	92	0	-92	multi-exon	FALSE	canonical	3	706	junction_3	52.9905651979671	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAGAACATGACACATAAG	3572	False	NA	NA	False	AATATA	-5	NA	19951000	19978799	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_19951062_19975600_19975753_19976046_19976170_19978309
H1_mix_00063855	chr3	+	827	7	NNC	ENSG00000231304.2	novel	1677	8	NA	NA	238417	66547	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8.61684396980704	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATCAATGAACATAGATT	NA	False	NA	-23	True	NA	NA	NA	20970800	21212514	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_20970857_21034325_21034444_21041751_21041893_21042975_21043124_21085294_21085432_21210997_21211052_21212341
H1_mix_00063856	chr3	+	1801	2	FSM	ENSG00000174748.22	ENST00000490223.1	1785	2	-16	0	0	0	multi-exon	FALSE	canonical	3	22197	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTGCTTACAGGTGTTA	1	True	NA	27	True	AATAAA	-16	NA	23917131	23919551	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_23918577_23919195
H1_mix_00063857	chr3	+	571	4	FSM	ENSG00000174748.22	ENST00000643707.1	571	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	10592.7342394052	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAGCTATCAGAAGAAAT	123	False	NA	NA	False	NA	NA	NA	23917298	23919301	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_23917445_23917849_23918032_23918439_23918577_23919195
H1_mix_00063858	chr3	+	1240	8	ISM	ENSG00000077092.20	ENST00000383772.9	3034	12	345028	1302	246	-368	3prime_fragment	FALSE	canonical	0	0	junction_1	13.988333331307	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGATCAATGCCACCTCTC	NA	False	NA	NA	False	NA	NA	NA	25174364	25596455	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_25174576_25461192_25461342_25501181_25501324_25569757_25569919_25580545_25580723_25593502_25593708_25594519_25594679_25596419
H1_mix_00063859	chr3	+	256	1	FSM	ENSG00000213872.3	ENST00000458542.1	409	1	168	-15	168	15	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTGTGTTTAAATAAAAC	NA	False	NA	NA	False	AAGAAA	-24	NA	25749655	25749911	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_25749700_25749900
H1_mix_00063860	chr3	+	1696	2	FSM	ENSG00000179796.12	ENST00000396641.6	1696	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	636	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGTGACTTATTGGTCAA	-14	True	NA	14	True	AATAAA	-25	NA	26622805	26710776	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_26623238_26709512
H1_mix_00063862	chr3	+	758	1	FSM	ENSG00000272282.1	ENST00000606069.1	1096	1	-731	1069	-731	-1069	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCCTCTAAGCGGTAGGA	NA	False	NA	NA	False	NA	NA	NA	27712178	27712936	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_27712200_27712900
H1_mix_00063863	chr3	+	3749	3	FSM	ENSG00000187118.14	ENST00000477739.1	3749	3	0	0	0	0	multi-exon	FALSE	canonical	3	540	junction_2	4.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTCAAAGTTTTGGTT	-44	True	NA	4	True	AATAAA	-4	NA	28241583	28319762	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_28241813_28263290_28263381_28316332
H1_mix_00063864	chr3	+	761	4	FSM	ENSG00000187118.14	ENST00000334841.10	724	4	-40	3	0	0	multi-exon	FALSE	canonical	3	26	junction_1	315.224082554335	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTTTGGTTTCTTAAAT	-44	True	NA	12	True	AATAAA	-12	NA	28241583	28319770	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_28241902_28263290_28263381_28316332_28316424_28319508
H1_mix_00063866	chr3	+	370	1	FSM	ENSG00000230480.1	ENST00000436725.1	349	1	33	-54	33	54	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATCAAAATTGGACAGAAAG	NA	False	NA	NA	False	AATAAA	-22	NA	28447757	28448127	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_28447800_28448100
H1_mix_00063867	chr3	+	1594	3	FSM	ENSG00000144642.22	ENST00000445077.1	448	3	-379	-767	-126	22	multi-exon	FALSE	canonical	1	3	junction_1	3.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTCCTTATTGGCTT	413	False	NA	NA	False	AAAACA	-45	NA	28576048	28758362	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_28576497_28757108_28757242_28757349
H1_mix_00063872	chr3	+	2064	4	FSM	ENSG00000163527.10	ENST00000463044.1	912	4	0	-1152	0	0	multi-exon	FALSE	canonical	2	62	junction_3	304.050799849119	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAAGTGTTGTTTTTTAC	7593	False	NA	22	True	AATAAA	-17	NA	31626060	31637616	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_31626128_31629297_31629412_31632934_31633185_31635983
H1_mix_00063873	chr3	+	612	5	FSM	ENSG00000152642.11	ENST00000425459.5	599	5	-13	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	12.9807549857472	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGAGACAACACCAAAGCG	-39	True	NA	NA	False	NA	NA	NA	32106619	32158918	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_32106759_32128075_32128254_32140227_32140367_32146621_32146735_32158875
H1_mix_00063874	chr3	+	1128	5	NNC	ENSG00000153551.14	novel	1856	5	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_4	125.309616550367	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCGGCCAGTTGCACAAG	-18	True	NA	5	True	AATAAA	-6	NA	32391874	32454828	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_32392066_32441839_32442014_32449453_32449553_32452391_32452474_32454246
H1_mix_00063876	chr3	+	2573	18	FSM	ENSG00000182973.20	ENST00000331889.10	2573	18	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_12	84.4280984402016	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGTCAATTCTACCCC	7	True	NA	13	True	AATAAA	-20	NA	32685144	32773714	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_32685483_32703867_32703963_32704810_32704973_32708669_32708821_32713226_32713370_32716224_32716312_32717153_32717238_32720113_32720232_32725449_32725600_32727667_32727871_32733422_32733545_32734799_32734977_32759457_32759572_32762732_32762864_32764454_32764491_32764681_32764810_32769886_32769963_32773456
H1_mix_00063877	chr3	+	2554	18	NIC	ENSG00000182973.20	novel	2772	19	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_17	83.7745780699363	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTTACACTTTTATTGA	3	True	NA	17	True	ATTAAA	-18	NA	32685329	32773875	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_32685483_32703867_32703963_32704810_32704973_32708669_32708821_32713226_32713370_32716224_32716312_32717153_32717238_32720113_32720232_32725449_32725600_32727667_32727871_32733422_32733545_32734799_32734977_32737409_32737491_32759457_32759572_32762732_32762864_32764454_32764491_32764681_32764810_32773456
H1_mix_00063881	chr3	+	875	2	FSM	ENSG00000182973.20	ENST00000476967.1	354	2	-158	-363	-158	0	multi-exon	FALSE	canonical	3	435	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTTACACTTTTATTGA	NA	False	NA	17	True	ATTAAA	-18	NA	32769506	32773875	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_32769963_32773456
H1_mix_00063882	chr3	+	1811	6	FSM	ENSG00000170275.15	ENST00000449224.1	1811	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	452.400972589582	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGATGATAATTGTGAAAAC	2	True	NA	15	True	AAGAAA	-12	NA	33114053	33143158	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_33114549_33120343_33120494_33124407_33124580_33132554_33132701_33134181_33134266_33142394
H1_mix_00063887	chr3	+	3070	9	FSM	ENSG00000144681.11	ENST00000457375.6	1366	9	-185	-1519	-185	0	multi-exon	FALSE	canonical	3	15	junction_2	14.6628782986152	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTCCTGATCTCTTCT	NA	False	NA	27	True	AATAAA	-34	NA	36380317	36548007	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_36380755_36443363_36443641_36486133_36486250_36493150_36493230_36504392_36504458_36505745_36505835_36528695_36528748_36528847_36528986_36546190
H1_mix_00063888	chr3	+	1192	3	NNC	ENSG00000144681.11	novel	476	3	NA	NA	-172	-4582	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	25	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTGTAAACTGTTTATTT	NA	False	NA	10	True	AATACA	-9	NA	36380330	36454759	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_36380755_36443363_36443641_36454268
H1_mix_00063889	chr3	+	1535	11	NNC	ENSG00000144681.11	novel	3067	11	NA	NA	-97	4193	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	16.5843299533023	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTTATTGGCAAAGTGT	34	False	NA	11	True	AATAAA	-21	NA	36380405	36533432	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_36380755_36443363_36443641_36482991_36483093_36484976_36485059_36486133_36486250_36493150_36493230_36504392_36504458_36505745_36505835_36528695_36528748_36528847_36528986_36533245
H1_mix_00063890	chr3	+	2265	16	FSM	ENSG00000076242.16	ENST00000673715.1	1978	16	-182	-105	-9	105	multi-exon	FALSE	canonical	3	254	junction_11	18.4306507993855	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTCTACTAAAAAAATAGAAA	3976	False	NA	118	True	NA	NA	NA	36993340	37047845	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_36993664_36996618_36996710_37000954_37001054_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37014431_37014545_37017505_37017600_37020309_37020464_37025636_37026008_37028783_37028933_37040185_37040295_37042267_37042332_37047518
H1_mix_00063891	chr3	+	2576	18	FSM	ENSG00000076242.16	ENST00000536378.5	2567	18	-9	0	-9	0	multi-exon	FALSE	canonical	0	0	junction_1	75.7417301662783	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTTCTTATTTAATTTT	3976	False	NA	27	True	AATAAA	-16	NA	36993340	37050842	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_36993664_37000954_37001054_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37014431_37014545_37017505_37017600_37020309_37020464_37025636_37026008_37028783_37028933_37040185_37040295_37042267_37042332_37047518_37047684_37048516_37048610_37048903_37049018_37050485
H1_mix_00063894	chr3	+	2388	18	NIC	ENSG00000076242.16	novel	2494	19	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	75.5130548533642	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTTCTTATTTAATTTT	8	True	NA	27	True	AATAAA	-16	NA	36993520	37050842	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_36993664_36996618_36996710_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37014431_37014545_37017505_37017600_37020309_37020464_37025636_37026008_37028783_37028933_37040185_37040295_37042267_37042332_37047518_37047684_37048516_37048610_37048903_37049018_37050485
H1_mix_00063895	chr3	+	2227	18	FSM	ENSG00000076242.16	ENST00000673673.1	2205	18	-22	0	0	0	multi-exon	FALSE	canonical	3	19	junction_15	71.2067995664618	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACACAGTGGATTGATTA	60	False	NA	-16	True	NA	NA	NA	36993572	37050799	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_36993664_36996618_36996710_37000954_37001054_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37014431_37014545_37017505_37017600_37020309_37020464_37025636_37026008_37028783_37028933_37040185_37040295_37042267_37042332_37048516_37048610_37048903_37049018_37050485
H1_mix_00063898	chr3	+	7709	24	NIC	ENSG00000144674.17	novel	7806	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_4	65.324231327186	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACATTTGTTTATTGTAC	4	True	NA	6	True	AATAAA	-14	NA	37243251	37366745	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_37243623_37251394_37251485_37273535_37273602_37281957_37282273_37289234_37289292_37294978_37295078_37296086_37296220_37298832_37299021_37299287_37299372_37302184_37302333_37315419_37315599_37319062_37319195_37321730_37321887_37323587_37327826_37328415_37328538_37328962_37329094_37335052_37335167_37337142_37337164_37337665_37337735_37340123_37340200_37347192_37347297_37355100_37355188_37361242_37361306_37366079
H1_mix_00063899	chr3	+	7733	24	NIC	ENSG00000144674.17	novel	7806	24	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_18	64.650054057232	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGTTTATTGTACTTGT	11	True	NA	10	True	AATAAA	-18	NA	37243258	37366749	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_37243623_37251394_37251485_37273535_37273602_37281957_37282273_37286013_37286062_37289234_37289292_37294978_37295078_37296086_37296220_37298832_37299021_37299287_37299372_37302184_37302333_37315419_37315599_37319062_37319195_37321730_37321887_37323587_37327826_37328415_37328538_37328962_37329094_37335052_37335167_37337665_37337735_37340123_37340200_37347192_37347297_37355100_37355188_37361242_37361306_37366079
H1_mix_00063900	chr3	+	1809	1	FSM	ENSG00000230409.3	ENST00000420496.3	906	1	-156	-747	-156	747	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGAAGGCTTTTCATAAA	NA	False	NA	NA	False	NA	NA	NA	37275536	37277345	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_37275500_37277300
H1_mix_00063901	chr3	+	375	1	Intergenic	novelGene_890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTTAAGAATTGGCCC	1454	False	NA	NA	False	AATACA	-21	NA	37277584	37277959	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_37277600_37278000
H1_mix_00063905	chr3	+	254	2	FSM	ENSG00000136059.16	ENST00000460040.1	448	2	194	0	194	0	multi-exon	FALSE	canonical	2	10	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATGGCCCGGCACTGGG	130	False	NA	NA	False	NA	NA	NA	37993586	37994005	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_37993733_37993897
H1_mix_00063907	chr3	+	285	1	FSM	ENSG00000200579.1	ENST00000363709.1	102	1	11	-194	11	194	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGCTCAATATCACTAAT	NA	False	NA	NA	False	TATAAA	-12	NA	38014578	38014863	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_38014600_38014900
H1_mix_00063909	chr3	+	606	2	FSM	ENSG00000172936.16	ENST00000460295.1	1088	2	-24	506	0	-506	multi-exon	FALSE	canonical	3	161	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGGCTGTGAGACCTTG	-31	True	NA	NA	False	NA	NA	NA	38138632	38140073	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_38139029_38139863
H1_mix_00063910	chr3	+	2743	3	FSM	ENSG00000172936.16	ENST00000416282.3	2725	3	-18	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	71.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAACTTGTGTGTGTGTTG	-31	True	NA	3	True	AATAAA	-15	NA	38138632	38143017	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_38139029_38140387_38140849_38141131
H1_mix_00063911	chr3	+	4301	17	NIC	ENSG00000172939.9	novel	1908	15	NA	NA	196	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	92.0298015590602	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTGGTGTATGGACGCT	NA	False	NA	NA	False	AATAAA	-13	NA	38165284	38255484	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_38165515_38183002_38183116_38190730_38190840_38198721_38198864_38216095_38216152_38221577_38221688_38223811_38223914_38224570_38224705_38229686_38229736_38230364_38230431_38236838_38236962_38246074_38246222_38247667_38247733_38249965_38250019_38251402_38251472_38252327_38252393_38252816
H1_mix_00063914	chr3	+	3237	17	FSM	ENSG00000093217.11	ENST00000424034.5	3484	17	-17	264	6	-264	multi-exon	FALSE	canonical	1	1	junction_2	6.21961363349847	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATGAAAATAGATATGGTC	-23	True	NA	NA	False	GATAAA	-32	NA	38346790	38414712	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_38346926_38348549_38348633_38365198_38365286_38365607_38365737_38366807_38366874_38368184_38368258_38370055_38370175_38372654_38372737_38374461_38374503_38375143_38375260_38376116_38376233_38376917_38376992_38379245_38379343_38395504_38395564_38397071_38397160_38400890_38400986_38412935
H1_mix_00063919	chr3	+	4925	2	FSM	ENSG00000114742.14	ENST00000466405.1	4925	2	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAAAGTGTAGTACACAT	NA	False	NA	17	True	AATAAA	-17	NA	39089567	39096664	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_39091702_39093873
H1_mix_00063920	chr3	+	731	3	FSM	ENSG00000168026.19	ENST00000490245.1	830	3	16	83	16	-83	multi-exon	FALSE	canonical	3	8	junction_2	0.5	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGGAGCCACACACACAC	NA	False	NA	NA	False	AATACA	-6	NA	39136747	39137710	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_39137061_39137194_39137388_39137485
H1_mix_00063921	chr3	+	287	1	FSM	ENSG00000270367.1	ENST00000605787.1	1936	1	383	1266	383	-1266	mono-exon	FALSE	NA	NA	NA	NA	NA	689	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CTCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	39286367	39286654	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_39286400_39286700
H1_mix_00063924	chr3	+	2981	16	FSM	ENSG00000170011.14	ENST00000425621.5	2981	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_11	6.69991708074726	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCATGTCAACAATTTGT	14	False	NA	NA	False	AATACA	-16	NA	39809705	40258521	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_39809917_39900786_39900927_40044049_40044272_40151047_40151185_40162729_40162811_40166845_40166944_40167158_40167240_40169949_40170094_40182219_40182374_40189825_40190464_40209853_40210094_40244445_40244608_40250221_40250327_40250438_40250500_40251880_40252000_40258133
H1_mix_00063925	chr3	+	1266	3	FSM	ENSG00000114784.4	ENST00000488260.1	637	3	0	-629	0	0	multi-exon	FALSE	canonical	3	980	junction_2	25.5	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGTTCTCTCATTCTGC	24	False	NA	73	True	AGTAAA	-23	NA	40309825	40312424	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_40309973_40310892_40311057_40311469
H1_mix_00063926	chr3	+	1451	2	FSM	ENSG00000114784.4	ENST00000487151.1	632	2	-67	-752	-67	0	multi-exon	FALSE	canonical	3	980	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGTTCTCTCATTCTGC	759	False	NA	73	True	AGTAAA	-23	NA	40310560	40312424	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_40311057_40311469
H1_mix_00063930	chr3	+	2800	16	FSM	ENSG00000168036.18	ENST00000647390.1	2784	16	-16	0	0	0	multi-exon	FALSE	canonical	2	23	junction_1	255.08834199591	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTAGCCTTGCTTGTTAA	-7	True	NA	NA	False	NA	NA	NA	41199469	41239900	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_41199623_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133_41239355_41239659
H1_mix_00063934	chr3	+	5533	17	FSM	ENSG00000182606.17	ENST00000487159.5	5536	17	0	3	0	-3	multi-exon	FALSE	canonical	3	20	junction_15	40.8113035812384	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACATACTGTTACATGCC	27	True	NA	132	True	ATTAAA	-15	NA	42013801	42225886	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_42014118_42087103_42087401_42125419_42125615_42176813_42176891_42184684_42184802_42188044_42188146_42189015_42189125_42191557_42191637_42193074_42193206_42193823_42193899_42194803_42194942_42199176_42199254_42200817_42201055_42202435_42202753_42209766_42209986_42219493_42219597_42222941
H1_mix_00063937	chr3	+	5015	15	NNC	ENSG00000182606.17	novel	5033	15	NA	NA	0	-113	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_13	51.7275535466193	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTATTCTGATTTGTATT	8	True	NA	22	True	AATAAA	-26	NA	42160211	42225776	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_42160474_42176813_42176891_42184684_42184802_42188044_42188146_42189015_42189125_42191557_42191637_42193074_42193206_42193823_42193899_42194803_42194942_42199176_42199254_42200817_42201055_42202435_42202753_42209766_42210124_42219493_42219597_42222941
H1_mix_00063938	chr3	+	1482	12	FSM	ENSG00000114812.13	ENST00000443646.5	1505	12	23	0	-8	0	multi-exon	FALSE	canonical	1	2	junction_1	7.34059245024958	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTGCCCCCGGCCCCCTG	14	True	NA	NA	False	NA	NA	NA	42502634	42536394	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_42502814_42519222_42519331_42525886_42525994_42527392_42527497_42527990_42528124_42530778_42530933_42531470_42531532_42531802_42531870_42532241_42532334_42534974_42535105_42535342_42535385_42536089
H1_mix_00063939	chr3	+	7236	17	NNC	ENSG00000114857.19	novel	7265	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_5	47.6469765567554	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGAGTCTGTTCATGTTT	40	False	NA	15	True	ATTAAA	-18	NA	42600717	42648735	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_42600779_42600983_42601065_42617569_42617645_42619019_42619128_42619663_42619709_42621428_42621517_42630545_42630576_42631170_42631317_42632600_42632824_42633579_42633736_42634612_42634701_42635220_42635367_42636867_42639751_42642500_42642597_42643338_42643396_42643898_42644004_42645887
H1_mix_00063941	chr3	+	10238	11	ISM	ENSG00000114857.19	ENST00000232978.13	7265	17	26397	0	-103	0	3prime_fragment	FALSE	canonical	3	87	junction_3	42.7017564041574	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGAGTCTGTTCATGTTT	1644	False	NA	15	True	ATTAAA	-18	NA	42627082	42648735	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_42630576_42631170_42631317_42632600_42632824_42633579_42633736_42634612_42634701_42635220_42635367_42636867_42639751_42642500_42642597_42643338_42643396_42643901_42644004_42645887
H1_mix_00063946	chr3	+	829	4	FSM	ENSG00000011198.10	ENST00000456453.5	876	4	47	0	47	0	multi-exon	FALSE	canonical	1	1	junction_1	79.2127935794886	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTAAGTGGTGGTGACAG	NA	False	NA	NA	False	NA	NA	NA	43690159	43702584	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_43690203_43690380_43690711_43699275_43699362_43702214
H1_mix_00063948	chr3	+	3615	11	FSM	ENSG00000179152.20	ENST00000412611.6	3306	11	-312	3	-7	0	multi-exon	FALSE	canonical	3	32	junction_4	14.2579802216162	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTTTTTTTCTTGTTA	0	True	NA	6	True	AATAAA	-17	NA	44338444	44409448	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_44338835_44354738_44354812_44357740_44357877_44361364_44361519_44367531_44367709_44392854_44392978_44396399_44396498_44396742_44396835_44400354_44400588_44401202_44401335_44407441
H1_mix_00063951	chr3	+	3492	6	FSM	ENSG00000196345.13	ENST00000273320.7	3477	6	-15	0	0	0	multi-exon	TRUE	canonical	3	8	junction_5	11.9899958298575	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCACATTGAATTATCC	-18	True	NA	11	True	AATAAA	-18	NA	44555192	44572158	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_44555519_44556929_44557471_44565486_44565656_44567911_44568004_44568306_44568434_44569921
H1_mix_00063953	chr3	+	7647	7	Fusion	ENSG00000186448.15_ENSG00000144792.9	novel	4299	5	NA	NA	0	-4	multi-exon	TRUE	canonical	3	18	junction_2	10.9303349547131	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATCAGGGCTTTCTACAG	6	True	NA	5	True	AATAAA	-15	NA	44584887	44648467	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr3_+_44585008_44586104_44586214_44629073_44629545_44631061_44631222_44632104_44632197_44632472_44632600_44641899
H1_mix_00063956	chr3	+	2948	3	FSM	ENSG00000169981.11	ENST00000296092.7	2503	3	-3	-442	-2	442	multi-exon	FALSE	canonical	3	16	junction_2	12.5	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGAAACAGGTGGTTGC	-9	True	NA	NA	False	NA	NA	NA	44648738	44661233	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_44648835_44650940_44651260_44658700
H1_mix_00063957	chr3	+	2397	1	FSM	ENSG00000272077.1	ENST00000606008.1	1953	1	-454	10	-454	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTGCTATATGTGTTGC	NA	False	NA	5	True	TATAAA	-11	NA	44666957	44669354	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_44667000_44669400
H1_mix_00063958	chr3	+	465	3	FSM	ENSG00000186446.12	ENST00000484233.1	479	3	0	14	0	-14	multi-exon	FALSE	canonical	3	5	junction_2	2.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTATTTTCTGTGGCTGGG	146	False	NA	NA	False	ATTAAA	-5	NA	44729780	44732251	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_44730016_44731475_44731561_44732106
H1_mix_00063960	chr3	+	3087	2	FSM	ENSG00000169964.8	ENST00000477126.1	3071	2	-16	0	-16	0	multi-exon	FALSE	canonical	3	111	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACGGTATCTTAATTCTT	-14	True	NA	28	True	AATAAA	-28	NA	44861887	44865670	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_44864344_44865039
H1_mix_00063961	chr3	+	2808	4	FSM	ENSG00000211456.13	ENST00000463347.5	854	4	-134	-1820	-19	-505	multi-exon	FALSE	canonical	3	556	junction_3	9.84321537348893	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGATTAAAGGGAATCTT	NA	False	NA	NA	False	NA	NA	NA	45689221	45709138	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_45689498_45703437_45703536_45705134_45705210_45706779
H1_mix_00063962	chr3	+	2183	21	FSM	ENSG00000211456.13	ENST00000418611.5	2164	21	-19	0	-19	0	multi-exon	TRUE	canonical	2	22	junction_2	159.920441157471	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGATGACAGAATTGATC	NA	False	NA	NA	False	NA	NA	NA	45689221	45743804	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_45689498_45690347_45690388_45703437_45703536_45705134_45705210_45706779_45706908_45709497_45709648_45713136_45713197_45714045_45714080_45719499_45719602_45721999_45722086_45722868_45722956_45723474_45723544_45731300_45731381_45732052_45732152_45735234_45735374_45737582_45737653_45737771_45737845_45738577_45738672_45738780_45738874_45739586_45739645_45743532
H1_mix_00063963	chr3	+	4625	20	FSM	ENSG00000211456.13	ENST00000455997.5	4661	20	36	0	-19	0	multi-exon	FALSE	canonical	2	22	junction_1	163.139863180183	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATTGGTATCATTCATG	NA	False	NA	28	True	AATAAA	-17	NA	45689221	45745407	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_45690388_45703437_45703536_45705134_45705210_45706779_45706908_45709497_45709648_45713136_45713197_45714045_45714080_45719499_45719602_45721999_45722086_45722868_45722956_45723474_45723544_45731300_45731381_45732052_45732152_45735245_45735374_45737582_45737653_45737771_45737845_45738577_45738672_45738780_45738874_45739586_45739645_45743532
H1_mix_00063967	chr3	+	402	1	FSM	ENSG00000244357.3	ENST00000469955.3	296	1	-360	254	-360	-254	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGAAGTGGGAGGATCA	NA	False	NA	NA	False	NA	NA	NA	45742314	45742716	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_45742300_45742700
H1_mix_00063969	chr3	+	1131	2	Intergenic	novelGene_898	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	35	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAGATGATTAAGAA	4837	False	NA	NA	False	AATAAA	-25	NA	46584553	46585896	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_46585237_46585448
H1_mix_00063970	chr3	+	451	2	FSM	ENSG00000181585.7	ENST00000651652.1	1038	2	90	497	90	-497	multi-exon	FALSE	canonical	2	2	junction_1	0	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTCCCCCTGCCCCACA	4428	False	NA	NA	False	NA	NA	NA	46705888	46709557	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_46705908_46709125
H1_mix_00063973	chr3	+	3508	23	FSM	ENSG00000160796.18	ENST00000443829.5	3508	23	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_15	47.4673659101312	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGCCGCAGCAGCACTTTT	6929	False	NA	NA	False	NA	NA	NA	47002032	47009548	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_47002289_47002370_47002521_47002644_47002803_47002956_47003082_47003173_47003310_47003815_47003977_47004076_47004394_47004494_47004591_47004971_47005097_47005180_47005322_47005488_47005620_47005737_47005848_47005945_47006064_47006164_47006263_47006332_47006450_47007240_47007351_47007524_47007698_47007815_47007911_47008069_47008187_47008282_47008442_47008519_47008669_47008988_47009125_47009218
H1_mix_00063974	chr3	+	4617	10	NNC	ENSG00000114648.12	novel	4622	10	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_6	24.8193472919817	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGTCCTTTCTTGGTT	18	False	NA	17	True	AATAAA	-17	NA	47282963	47346816	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_47283095_47319652_47319784_47322567_47322709_47329950_47330150_47333156_47333318_47334682_47334820_47336519_47336758_47340571_47340677_47342718_47342831_47343554
H1_mix_00063976	chr3	+	413	5	FSM	ENSG00000076201.16	ENST00000477276.2	882	5	469	0	469	0	multi-exon	FALSE	canonical	3	6	junction_1	22.8842194535885	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCTACAGCGAGGAGGG	NA	False	NA	NA	False	NA	NA	NA	47405748	47406750	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_47405799_47405944_47406047_47406324_47406406_47406480_47406613_47406702
H1_mix_00063978	chr3	+	480	1	FSM	ENSG00000271161.1	ENST00000604904.1	567	1	265	-178	265	178	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGTAGCAGGTCACAGAC	NA	False	NA	NA	False	AAAAAG	-3	NA	47500105	47500585	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_47500100_47500600
H1_mix_00063979	chr3	+	3982	21	NIC	ENSG00000132153.15	novel	3855	22	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	66	junction_3	148.853988861569	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGACCACTGCTGTCCAC	3	False	NA	19	True	AATAAA	-15	NA	47802908	47850187	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_47803213_47805325_47805421_47810656_47810712_47827346_47827478_47829023_47829135_47840876_47841179_47841616_47841738_47843105_47843256_47845699_47845853_47846164_47847002_47847272_47847349_47847431_47847537_47847780_47847957_47848179_47848387_47848468_47848551_47848623_47848818_47848919_47849080_47849191_47849350_47849450_47849555_47849629_47849770_47849866
H1_mix_00063980	chr3	+	4559	23	NIC	ENSG00000132153.15	novel	3887	23	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_4	186.099263701964	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGACCACTGCTGTCCAC	3	False	NA	19	True	AATAAA	-15	NA	47802908	47850187	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_47803213_47805325_47805421_47810656_47810712_47818021_47818118_47824766_47825248_47827346_47827478_47829023_47829135_47840876_47841179_47841616_47841738_47843105_47843256_47845699_47845853_47846164_47847002_47847272_47847349_47847431_47847537_47847780_47847957_47848179_47848387_47848468_47848551_47848623_47848818_47848919_47849080_47849191_47849350_47849450_47849555_47849629_47849770_47849866
H1_mix_00063981	chr3	+	4588	24	NIC	ENSG00000132153.15	novel	3887	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_5	220.121482183622	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGACCACTGCTGTCCAC	3	False	NA	19	True	AATAAA	-15	NA	47802908	47850187	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_47803213_47805325_47805421_47810656_47810712_47818021_47818118_47819235_47819265_47824766_47825248_47827346_47827478_47829023_47829135_47840876_47841179_47841616_47841738_47843105_47843256_47845699_47845853_47846164_47847002_47847272_47847349_47847431_47847537_47847780_47847957_47848179_47848387_47848468_47848551_47848623_47848818_47848919_47849080_47849191_47849350_47849450_47849555_47849629_47849770_47849866
H1_mix_00063984	chr3	+	1970	9	FSM	ENSG00000132153.15	ENST00000441384.5	1957	9	-13	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	287.017856587356	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAAGTGTGGCGTTTCCTT	16	False	NA	3	True	AATAAA	-17	NA	47803124	47842679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_47803213_47805325_47805421_47810656_47810712_47818021_47818118_47819235_47819265_47827346_47827478_47829023_47829135_47840876_47841179_47841616
H1_mix_00063985	chr3	+	3660	20	FSM	ENSG00000132153.15	ENST00000446256.6	3660	20	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_2	159.961040963226	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTGTCCACTAGGGGCT	7225	False	NA	27	True	AATAAA	-23	NA	47810683	47850195	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_47810712_47818021_47818118_47827346_47827478_47829023_47829135_47840876_47841179_47841616_47841738_47843105_47843256_47845699_47845853_47846164_47847002_47847272_47847349_47847431_47847537_47847780_47847957_47848179_47848387_47848468_47848551_47848623_47848818_47848919_47849080_47849191_47849350_47849450_47849555_47849629_47849770_47849866
H1_mix_00063988	chr3	+	619	3	FSM	ENSG00000232112.3	ENST00000477624.1	619	3	0	0	0	0	multi-exon	FALSE	canonical	3	16226	junction_1	771.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATGGCGTTCTTGTGTG	6	False	NA	14	True	ATTAAA	-14	NA	48440283	48444203	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_48440459_48440540_48440629_48443847
H1_mix_00063989	chr3	+	700	6	FSM	ENSG00000164053.22	ENST00000635099.1	711	6	11	0	11	0	multi-exon	FALSE	canonical	0	0	junction_1	41.282441788247	999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAGAGGCCCAGAAAAGC	6414	False	NA	NA	False	CATAAA	-3	NA	48446720	48459397	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_48446800_48450036_48450171_48451728_48451900_48454299_48454419_48457258_48457417_48459358
H1_mix_00063990	chr3	+	3585	11	FSM	ENSG00000164053.22	ENST00000634384.2	3585	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_10	28.8868482185233	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGAGTGGTCAATTGGC	7181	False	NA	4	True	AATAAA	-19	NA	48454309	48467645	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_48454419_48457258_48457417_48459358_48459455_48459786_48459917_48460109_48460800_48463744_48463882_48464040_48464133_48464581_48464663_48464830_48465084_48465486_48466310_48466629
H1_mix_00063991	chr3	+	396	3	FSM	ENSG00000164053.22	ENST00000635084.1	545	3	0	149	0	138	multi-exon	FALSE	canonical	3	95	junction_1	7.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTGCCCCGGGCAGTCCTT	7229	False	NA	NA	False	NA	NA	NA	48454357	48459535	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_48454419_48457258_48457417_48459358
H1_mix_00063992	chr3	+	359	1	FSM	ENSG00000271973.1	ENST00000607025.1	279	1	-209	129	-209	-129	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTTTCAGCACCCCAAT	NA	False	NA	NA	False	NA	NA	NA	48672245	48672604	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_48672200_48672600
H1_mix_00063994	chr3	+	565	6	FSM	ENSG00000177479.20	ENST00000482427.5	556	6	-17	8	-2	0	multi-exon	FALSE	canonical	3	16	junction_2	351.513868858684	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTCTGCCACAAAACTT	-30	True	NA	NA	False	NA	NA	NA	48918826	48967275	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_48918999_48922747_48922812_48945135_48945182_48961611_48961680_48964918_48964983_48967124
H1_mix_00063996	chr3	+	691	7	FSM	ENSG00000177479.20	ENST00000483333.5	674	7	-17	0	-2	0	multi-exon	FALSE	canonical	3	22	junction_2	269.184416339431	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGGGTACAGGAGCCTAGAG	-30	True	NA	NA	False	NA	NA	NA	48918826	48970644	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_48918999_48922747_48922812_48961611_48961680_48964918_48964983_48967124_48967276_48968533_48968656_48970594
H1_mix_00064002	chr3	+	2318	9	NNC	ENSG00000178467.18	novel	2268	9	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	40.2049437258654	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCGGGCCCGACAAACT	20	True	NA	27	True	AATAAA	-17	NA	48990258	49007115	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_48990611_48990832_48990915_49001437_49001629_49002499_49002597_49004097_49004261_49004860_49005591_49005717_49005868_49006063_49006188_49006686
H1_mix_00064003	chr3	+	5285	4	FSM	ENSG00000178467.18	ENST00000484115.5	5285	4	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	15.2970585407784	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCGGGCCCGACAAACT	46	False	NA	27	True	AATAAA	-17	NA	48989937	49007115	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_48990915_49001437_49001629_49002499_49006188_49006686
H1_mix_00064004	chr3	+	3377	6	FSM	ENSG00000178252.19	ENST00000448293.5	3377	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	239.092952635581	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGATGGGCTGTCTGTGCCC	184	False	NA	NA	False	NA	NA	NA	49007607	49015347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_49007660_49011634_49014117_49014209_49014294_49014382_49014500_49014599_49014719_49014824
H1_mix_00064006	chr3	+	304	1	FSM	ENSG00000272434.1	ENST00000607245.1	391	1	-61	148	-61	-148	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTGGCCTTGTCACTGAG	58	False	NA	NA	False	AAGAAA	-20	NA	49029254	49029558	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_49029300_49029600
H1_mix_00064008	chr3	+	1107	3	NIC	ENSG00000185909.15	novel	726	5	NA	NA	18	-207	intron_retention	FALSE	canonical	0	0	junction_2	37	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGGTGACTGCTTTTGAA	29	False	NA	NA	False	NA	NA	NA	49171639	49174759	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_49171686_49172635_49173176_49174238
H1_mix_00064010	chr3	+	1901	3	NIC	ENSG00000185909.15	novel	1972	6	NA	NA	-138	0	intron_retention	FALSE	canonical	3	84	junction_2	1	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGGACCCTGGTGTGA	2439	False	NA	25	True	AGTAAA	-18	NA	49174049	49176486	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_49174967_49175061_49175164_49175604
H1_mix_00064012	chr3	+	5575	4	FSM	ENSG00000173402.12	ENST00000538711.5	5582	4	0	7	0	-4	multi-exon	FALSE	canonical	3	25	junction_1	269.407992952449	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACGCCGTTGCATCTGGG	-5	True	NA	11	True	AATAAA	-16	NA	49470131	49535611	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_49470434_49476848_49476906_49510418_49510820_49530796
H1_mix_00064013	chr3	+	5672	4	FSM	ENSG00000173402.12	ENST00000541308.5	5676	4	-2	6	-2	-3	multi-exon	FALSE	canonical	3	5	junction_1	276.515219593184	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACGCCGTTGCATCTGGGC	-7	True	NA	12	True	AATAAA	-17	NA	49470129	49535612	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_49470434_49492822_49492974_49510418_49510820_49530796
H1_mix_00064015	chr3	+	743	5	FSM	ENSG00000164062.13	ENST00000491799.5	733	5	-11	1	0	-1	multi-exon	FALSE	canonical	3	63	junction_1	477.298845064599	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGCAGCAACAGCCTGTG	-22	True	NA	NA	False	NA	NA	NA	49674350	49676515	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_49674622_49675693_49675788_49675890_49675967_49676055_49676220_49676377
H1_mix_00064018	chr3	+	2254	21	NIC	ENSG00000164062.13	novel	2879	22	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_2	277.481999416178	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTCCTGCTGGTACT	8	True	NA	27	True	AATAAA	-13	NA	49674380	49683503	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_49674414_49674488_49674622_49675693_49675788_49675890_49675967_49676055_49676220_49676377_49676516_49676608_49676701_49676776_49676818_49676902_49677025_49677572_49677634_49678851_49678950_49679592_49679645_49680540_49680630_49681100_49681240_49681721_49681806_49681886_49681968_49682347_49682437_49682545_49682737_49682842_49682946_49683039_49683147_49683236
H1_mix_00064023	chr3	+	3928	20	NIC	ENSG00000004534.15	novel	4010	21	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_2	199.960605538474	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTATCTTTTTGTTATTTT	5	True	NA	15	True	AATAAA	-15	NA	49940047	50077247	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_49940226_49962575_49962686_49967197_49968749_49972058_49972149_49975322_49975393_50048244_50048320_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
H1_mix_00064028	chr3	+	820	4	FSM	ENSG00000003756.17	ENST00000492472.1	902	4	0	82	0	-82	multi-exon	FALSE	canonical	3	161	junction_2	26.5120517668642	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTTCACGCCATTCTCCT	34	False	NA	NA	False	NA	NA	NA	50088974	50094248	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_50089030_50090381_50090452_50092042_50092209_50093719
H1_mix_00064029	chr3	+	2672	18	NIC	ENSG00000003756.17	novel	5616	25	NA	NA	93	3	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	66.0045610251638	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTGTCCTGTGTCTCTTT	9846	False	NA	25	True	AAGAAA	-13	NA	50102818	50118960	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_50103167_50105076_50105143_50105548_50105710_50106766_50106865_50107481_50107570_50108069_50108148_50108231_50108305_50109602_50109689_50110378_50110464_50110678_50110771_50113382_50113545_50113949_50114100_50114179_50114252_50115427_50115608_50115905_50115981_50117073_50117172_50117249_50117380_50118330
H1_mix_00064031	chr3	+	434	2	FSM	ENSG00000003756.17	ENST00000474470.1	434	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAGGGGAAAGAGAAGA	NA	False	NA	12	True	NA	NA	NA	50112063	50113492	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_50112129_50113123
H1_mix_00064035	chr3	+	3747	18	NIC	ENSG00000001617.12	novel	3607	19	NA	NA	-4	-1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_8	43.2546975267599	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTTTGGCTTCTCTCCTT	-4	True	NA	27	True	AATAAA	-17	NA	50155040	50189072	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_50155565_50159574_50159735_50173792_50173954_50174051_50174115_50174230_50174351_50175095_50175189_50176767_50176862_50182283_50182404_50182903_50183019_50183185_50183256_50183419_50183565_50184591_50184815_50185442_50185532_50185665_50185708_50185888_50186047_50186280_50186349_50186612_50186747_50187704
H1_mix_00064036	chr3	+	3733	18	NIC	ENSG00000001617.12	novel	3607	19	NA	NA	11	-1	combination_of_known_junctions	FALSE	canonical	3	62	junction_5	28.1206003863709	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTTTGGCTTCTCTCCTT	18	False	NA	27	True	AATAAA	-17	NA	50155101	50189072	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_50155565_50159574_50159735_50173792_50173954_50174051_50174115_50174230_50174351_50176767_50176862_50182283_50182404_50182643_50182784_50182903_50183019_50183185_50183256_50183419_50183565_50184591_50184815_50185442_50185532_50185665_50185708_50185888_50186047_50186280_50186349_50186612_50186747_50187704
H1_mix_00064037	chr3	+	257	3	FSM	ENSG00000188338.15	ENST00000417851.2	438	3	181	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCGTGCTGACAGCAGTCA	2375	False	NA	NA	False	NA	NA	NA	50217916	50218668	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_50217997_50218269_50218371_50218592
H1_mix_00064038	chr3	+	2286	10	NNC	ENSG00000114353.17	novel	2219	9	NA	NA	-57	48341	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	329.871729653651	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACCCAAAATAAATAAAAAGG	5607	False	NA	NA	False	NA	NA	NA	50236146	50307703	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_50236454_50252099_50252143_50252396_50252539_50253023_50253185_50256191_50256321_50256722_50256853_50256936_50257091_50257499_50257715_50258367_50259348_50307678
H1_mix_00064039	chr3	+	451	1	FSM	ENSG00000213600.3	ENST00000395152.3	367	1	-116	32	-116	-32	mono-exon	FALSE	NA	NA	NA	NA	NA	1880	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCACATAGCAAGGGCTCA	3293	False	NA	NA	False	NA	NA	NA	50239501	50239952	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_50239500_50240000
H1_mix_00064040	chr3	+	934	7	FSM	ENSG00000012171.20	ENST00000621029.4	934	7	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_1	6.86577664134866	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGACTCCCGCTGGCTCAA	4	True	NA	NA	False	NA	NA	NA	50267557	50271458	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_50267770_50269160_50269350_50270126_50270285_50270432_50270496_50270889_50271010_50271087_50271182_50271360
H1_mix_00064041	chr3	+	2925	18	FSM	ENSG00000012171.20	ENST00000618865.4	2925	18	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_10	11.9250833312287	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTGGAATGGCCCCAGC	-28	True	NA	6	True	AATAAA	-14	NA	50267607	50277139	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_50267770_50269160_50269350_50270126_50270285_50270432_50270496_50270889_50271010_50271087_50271182_50271360_50271481_50273297_50273444_50273534_50273647_50273758_50273829_50273912_50274058_50274362_50274583_50274842_50274935_50275011_50275054_50275301_50275460_50275559_50275616_50275704_50275845_50276301
H1_mix_00064042	chr3	+	3170	17	FSM	ENSG00000012171.20	ENST00000616701.5	3184	17	14	0	-4	0	multi-exon	FALSE	canonical	3	9	junction_9	12.1475306132563	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-31	True	NA	NA	False	NA	NA	NA	50269160	50277546	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_50269350_50270126_50270285_50270432_50270496_50270889_50271010_50271087_50271182_50271360_50271481_50273297_50273444_50273534_50273647_50273758_50273829_50273912_50274058_50274362_50274583_50274842_50274935_50275011_50275054_50275301_50275460_50275559_50275616_50275704_50275845_50276301
H1_mix_00064043	chr3	+	3072	5	FSM	ENSG00000012171.20	ENST00000419007.5	3283	5	189	22	189	0	multi-exon	FALSE	canonical	3	9	junction_1	13.5899779249269	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTGGAATGGCCCCAGC	384	False	NA	6	True	AATAAA	-14	NA	50273534	50277139	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_50273829_50273912_50274583_50274842_50275460_50275559_50275616_50275704
H1_mix_00064044	chr3	+	474	3	FSM	ENSG00000114738.11	ENST00000497283.1	793	3	256	63	256	-63	multi-exon	FALSE	canonical	1	1	junction_1	1	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAAGGGTTTTGGCCTTC	259	False	NA	NA	False	NA	NA	NA	50612583	50614054	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_50612700_50612847_50612943_50613791
H1_mix_00064045	chr3	+	1177	10	FSM	ENSG00000114738.11	ENST00000430409.5	1160	10	-18	1	-18	-1	multi-exon	TRUE	canonical	3	103	junction_1	67.942422973472	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGTGGGCTCTGCCTCAG	4788	False	NA	NA	False	NA	NA	NA	50617112	50647203	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_50617242_50617513_50617785_50640365_50640506_50641706_50641772_50642252_50642333_50644408_50644533_50645709_50645786_50646139_50646265_50646739_50646826_50647122
H1_mix_00064048	chr3	+	10049	23	NNC	ENSG00000164080.14	novel	9957	23	NA	NA	-1	0	at_least_one_novel_splicesite	TRUE	canonical	3	10	junction_1	12.1591546302493	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGCAGTGTTGTTTGATC	-7	True	NA	12	True	AATAAA	-13	NA	51538717	51668660	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_51538916_51541497_51541651_51590366_51590560_51627552_51627755_51629333_51629474_51630271_51630389_51630704_51630932_51633576_51633760_51633901_51634036_51635592_51635790_51637160_51637504_51638143_51638322_51639418_51639671_51639880_51640000_51641748_51641868_51643874_51643975_51645023_51645230_51645590_51645764_51646284_51646482_51655970_51656171_51657579_51657670_51660025_51660119_51662425
H1_mix_00064049	chr3	+	2376	5	FSM	ENSG00000164081.13	ENST00000415259.5	2290	5	-52	-34	28	0	multi-exon	FALSE	canonical	3	17	junction_1	52.3563510951632	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGATTTGGGTTGTGTAT	4992	False	NA	10	True	AATAAA	-22	NA	51671202	51704317	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_51672302_51674270_51674563_51684412_51684635_51699405_51699575_51703723
H1_mix_00064050	chr3	+	5043	5	NIC	ENSG00000164082.15	novel	3356	6	NA	NA	-7	0	intron_retention	FALSE	canonical	3	14	junction_1	7.96868872525461	402	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCTTTGCCTTTGACCC	-13	True	NA	48	True	AATAAA	-20	NA	51707060	51718613	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_51709434_51712472_51713311_51715061_51716138_51717636_51717818_51718038
H1_mix_00064051	chr3	+	560	4	FSM	ENSG00000041880.15	ENST00000475782.1	771	4	211	0	211	0	multi-exon	FALSE	canonical	3	8	junction_2	0.816496580927726	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGCATCATGCCACATTC	1706	False	NA	NA	False	NA	NA	NA	51944997	51946261	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_51945225_51945494_51945645_51945852_51945940_51946165
H1_mix_00064052	chr3	+	2119	1	FSM	ENSG00000180929.6	ENST00000322241.6	2119	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTACAGAGTGTCTGCTGC	-16	True	NA	NA	False	AAAACA	-14	NA	51955380	51957499	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_51955400_51957500
H1_mix_00064053	chr3	+	1054	6	NNC	ENSG00000248487.10	novel	1066	5	NA	NA	0	741	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	31.9211528613864	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTAGCTGGGCACTGTG	-11	True	NA	NA	False	NA	NA	NA	51975101	51981937	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_51975205_51977870_51978083_51978258_51978375_51980392_51980629_51980835_51981189_51981903
H1_mix_00064054	chr3	+	1409	14	FSM	ENSG00000243989.9	ENST00000476351.5	1409	14	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	85.8760631657744	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACACTCGTGGAGCAAGAA	-55	True	NA	38	True	AATAAA	-38	NA	51983442	51989197	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_51983590_51984046_51984159_51985400_51985466_51985851_51985947_51986254_51986332_51986414_51986505_51986604_51986662_51986987_51987062_51987146_51987197_51987308_51987454_51987555_51987625_51988523_51988604_51988765_51988827_51988910
H1_mix_00064055	chr3	+	757	9	FSM	ENSG00000243989.9	ENST00000469863.1	755	9	-2	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	114.995584154349	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACGTGGCACCCCAGGAGG	37	True	NA	NA	False	NA	NA	NA	51983534	51987061	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_51983590_51984046_51984159_51985206_51985272_51985333_51985466_51985851_51985947_51986254_51986332_51986414_51986505_51986604_51986662_51986987
H1_mix_00064057	chr3	+	2440	12	FSM	ENSG00000023330.15	ENST00000394965.6	2430	12	-10	0	-2	0	multi-exon	FALSE	canonical	3	8	junction_2	114.469022118621	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTCTGCTATTGGCTA	3983	False	NA	33	True	AATAAA	-18	NA	52198083	52214327	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_52198256_52198671_52198849_52199220_52199441_52202506_52202735_52203862_52204013_52204692_52204916_52205838_52206024_52206571_52206752_52208082_52208248_52211282_52211552_52212257_52212421_52214019
H1_mix_00064058	chr3	+	1230	2	FSM	ENSG00000243224.1	ENST00000464958.1	1056	2	-106	-68	-64	68	multi-exon	FALSE	canonical	1	1	junction_1	0	619	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTTACTTTTTCCATC	NA	False	NA	NA	False	NA	NA	NA	52239193	52241165	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_52239436_52240177
H1_mix_00064059	chr3	+	999	6	FSM	ENSG00000168237.18	ENST00000471180.5	992	6	-7	0	0	0	multi-exon	TRUE	canonical	3	9	junction_4	5.88557558782486	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTCTCAGTGCGCCTTC	0	True	NA	6	True	AATAAA	-14	NA	52287827	52293471	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_52287877_52290959_52291112_52291746_52291923_52292259_52292570_52293045_52293193_52293306
H1_mix_00064060	chr3	+	3772	5	FSM	ENSG00000168237.18	ENST00000436784.7	3791	5	0	19	0	-19	multi-exon	FALSE	canonical	3	10	junction_1	7.04893608993584	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATTTTGGATCATTGAAG	0	True	NA	-9	True	CATAAA	-3	NA	52287827	52295238	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_52287877_52290303_52290720_52290959_52291112_52291746_52291923_52292259
H1_mix_00064061	chr3	+	1324	5	NNC	ENSG00000010318.22	novel	962	4	NA	NA	-149	605	intron_retention	FALSE	non_canonical	0	0	junction_4	18.1176709319934	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTTTGATAAATGTATG	-4	True	NA	NA	False	NA	NA	NA	52410510	52415449	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_52411340_52412810_52412921_52413995_52414049_52414495_52414789_52415410
H1_mix_00064062	chr3	+	962	4	FSM	ENSG00000010318.22	ENST00000473145.5	962	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	10.077477638554	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	151	False	NA	NA	False	NA	NA	NA	52410889	52414844	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_52411340_52412810_52412921_52413995_52414049_52414495
H1_mix_00064063	chr3	+	8864	21	NIC	ENSG00000010322.16	novel	5139	21	NA	NA	-91	0	intron_retention	TRUE	canonical	3	34	junction_13	76.266637529132	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATCTTCTAAACCAAGGG	7	True	NA	36	True	AATAAA	-19	NA	52455512	52493068	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_52455735_52457842_52457927_52458661_52458845_52470858_52470908_52471813_52471978_52472302_52472399_52473733_52473830_52476446_52476600_52477573_52477643_52478096_52478283_52478448_52478578_52479748_52479863_52480183_52480296_52480878_52484638_52485777_52485828_52487195_52488606_52489335_52489679_52490074_52490232_52490704_52490834_52491351_52491514_52491871
H1_mix_00064064	chr3	+	3227	13	NNC	ENSG00000010322.16	novel	3168	13	NA	NA	17	0	intron_retention	FALSE	canonical	3	19	junction_10	99.8768686377826	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGCACCTCTCTTTC	19	True	NA	6	True	AATAAA	-16	NA	52455633	52481910	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_52455735_52457842_52457927_52458661_52458845_52470858_52470908_52471813_52471978_52472302_52472399_52473733_52473830_52476446_52476600_52477573_52477643_52478096_52478283_52478372_52478578_52479748_52479863_52480183
H1_mix_00064066	chr3	+	599	4	FSM	ENSG00000163938.17	ENST00000462550.5	597	4	-2	0	0	0	multi-exon	FALSE	canonical	3	1227	junction_2	41.6653333119993	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCCAAGGCTGGTCTCA	9	True	NA	NA	False	NA	NA	NA	52686029	52687827	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_52686106_52686768_52686828_52687245_52687384_52687501
H1_mix_00064069	chr3	+	666	1	FSM	ENSG00000275956.1	ENST00000613728.1	1321	1	89	566	89	-566	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTTAACAGCAATTCAAAC	NA	False	NA	NA	False	NA	NA	NA	52732635	52733301	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_52732600_52733300
H1_mix_00064070	chr3	+	1767	1	FSM	ENSG00000280417.1	ENST00000623443.1	1957	1	190	0	190	0	mono-exon	FALSE	NA	NA	NA	NA	NA	239	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCACTGTCATCGGTTGT	NA	False	NA	5	True	AGTAAA	-17	NA	53046355	53048122	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_53046400_53048100
H1_mix_00064071	chr3	+	497	3	FSM	ENSG00000157388.20	ENST00000637844.1	548	3	-21	72	-21	-72	multi-exon	FALSE	canonical	1	2	junction_1	1.5	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGCCAGATTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	53801242	53805146	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_53801426_53803422_53803573_53804982
H1_mix_00064073	chr3	+	331	1	FSM	ENSG00000229806.1	ENST00000449885.1	432	1	41	60	41	-60	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGCACGGCGGGCCCGG	60	False	NA	NA	False	NA	NA	NA	54626255	54626586	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_54626300_54626600
H1_mix_00064081	chr3	+	1224	1	FSM	ENSG00000272202.1	ENST00000607541.1	1159	1	14	-79	14	79	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGCTTCTCAAATGAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	57078956	57080180	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_57079000_57080200
H1_mix_00064082	chr3	+	2170	20	FSM	ENSG00000157500.12	ENST00000482800.5	2217	20	0	47	0	-47	multi-exon	FALSE	canonical	3	214	junction_8	26.2658473467373	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCTACTGAGGAGGTCTG	33	True	NA	NA	False	AATACA	-37	NA	57227788	57267974	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_57227938_57235565_57235665_57237491_57237552_57238044_57238117_57240464_57240553_57242100_57242143_57242855_57242915_57246075_57246223_57247394_57247478_57248192_57248352_57249359_57249549_57252268_57252312_57253681_57253739_57256956_57257052_57257245_57257429_57259027_57259081_57259844_57260020_57260116_57260154_57260627_57260775_57267741
H1_mix_00064083	chr3	+	883	6	FSM	ENSG00000157500.12	ENST00000464446.5	886	6	0	3	0	2	multi-exon	FALSE	canonical	3	234	junction_4	26.0645352922319	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACCTTTTTCTGCTTGTTA	1018	False	NA	NA	False	AATAAA	-18	NA	57253681	57260436	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_57253739_57256956_57257052_57257245_57257429_57259027_57259081_57259844_57260020_57260116
H1_mix_00064084	chr3	+	500	5	FSM	ENSG00000157500.12	ENST00000488530.1	728	5	228	0	228	0	multi-exon	FALSE	canonical	3	234	junction_1	30.4251129825347	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAATCCAAGATGTGGC	3806	False	NA	NA	False	AAAACA	-23	NA	57258990	57267792	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_57259081_57259844_57260020_57260116_57260154_57260627_57260775_57267741
H1_mix_00064085	chr3	+	3045	2	FSM	ENSG00000174840.9	ENST00000487257.1	3040	2	-5	0	-3	0	multi-exon	FALSE	canonical	3	83	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTCTCATCTTTCATTT	-20	True	NA	9	True	AATAAA	-17	NA	57556270	57560937	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_57557688_57559309
H1_mix_00064086	chr3	+	5431	23	NIC	ENSG00000163681.16	novel	6381	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_12	30.5560384801974	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCATGTTTGAGTTGAATA	18	True	NA	10	True	AATAAA	-18	NA	57756308	57929167	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_57756343_57756547_57757850_57831382_57831531_57841298_57841372_57847196_57847234_57849753_57849817_57857732_57857829_57858087_57858160_57860698_57860840_57861948_57862087_57864547_57864717_57864806_57864858_57890040_57890101_57896510_57896592_57896872_57896933_57907883_57908007_57909075_57909151_57912380_57912702_57913157_57913276_57916905_57917078_57922888_57923024_57925844_57925935_57927295
H1_mix_00064095	chr3	+	6497	19	FSM	ENSG00000136068.16	ENST00000481470.5	6497	19	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	125.149157921238	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTGTTCTTGGA	8795	False	NA	21	True	AATAAA	-17	NA	58132077	58172251	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_58132932_58134615_58134773_58135978_58136169_58138281_58138530_58142649_58142753_58143472_58143614_58145920_58146050_58146819_58146994_58148205_58148365_58148648_58148853_58149849_58150003_58150104_58150228_58153374_58153642_58154790_58154929_58155959_58156076_58159553_58159687_58163153_58163331_58168439_58169794_58170574
H1_mix_00064103	chr3	+	2901	18	NIC	ENSG00000168297.16	novel	3001	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_16	19.9676208485874	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGTCTGTAGCTTGAC	-33	True	NA	15	True	ATTAAA	-16	NA	58332884	58426023	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_58333091_58365873_58365925_58369430_58369479_58382513_58382701_58390581_58390660_58391146_58391221_58391772_58391848_58394997_58395103_58395657_58395760_58397038_58397201_58397604_58397723_58399298_58399378_58403861_58403911_58408923_58409002_58409531_58409619_58410089_58410160_58412903_58412964_58424751
H1_mix_00064106	chr3	+	314	1	FSM	ENSG00000272182.1	ENST00000607214.1	561	1	46	201	46	-201	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAACAGGTAATATAATCA	3428	False	NA	NA	False	NA	NA	NA	58428300	58428614	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_58428300_58428600
H1_mix_00064108	chr3	+	564	2	FSM	ENSG00000168301.13	ENST00000479179.1	564	2	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGCTTCTTGGAGATG	1801	False	NA	NA	False	GGGGCT	-6	NA	58493914	58498782	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_58494409_58498712
H1_mix_00064109	chr3	+	5576	2	FSM	ENSG00000144724.20	ENST00000475527.1	2694	2	-1147	-1735	-865	1735	multi-exon	FALSE	canonical	3	126	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAAAAAAAAAAAAGAA	45	False	NA	NA	False	NA	NA	NA	61560703	61752784	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_61562373_61748877
H1_mix_00064112	chr3	+	3497	6	FSM	ENSG00000114405.11	ENST00000494481.5	3525	6	22	6	-7	-6	multi-exon	FALSE	canonical	3	3	junction_1	104.03768547983	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTATTTTGTCACTTCTG	17	False	NA	NA	False	ATTAAA	-10	NA	62319064	62336207	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_62319233_62319720_62319833_62320459_62320525_62321929_62322054_62331324_62331400_62333254
H1_mix_00064113	chr3	+	4659	4	NNC	ENSG00000244342.5	novel	550	6	NA	NA	-225	-24244	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	33.7671766990109	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACAAAAAAATGCTATGGT	NA	False	NA	NA	False	NA	NA	NA	62950204	63089467	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_62950519_62952006_62952084_62985035_62985120_63085283
H1_mix_00064114	chr3	+	2343	11	NNC	ENSG00000244342.5	novel	1957	9	NA	NA	-134	-2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	28.7708185493566	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTGTCTCGATGTCTGC	NA	False	NA	13	True	AATAAA	-15	NA	62950295	63125060	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_62950519_62952006_62952084_62985035_62985120_62989133_62989266_63102691_63102830_63106302_63106423_63113609_63113767_63118698_63118943_63122255_63122320_63123322_63123449_63124082
H1_mix_00064116	chr3	+	1900	2	ISM	ENSG00000244342.5	ENST00000468072.1	1957	9	172020	38	16516	-38	3prime_fragment	FALSE	canonical	3	85	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGCACTTGCCTTAATA	NA	False	NA	-23	True	NA	NA	NA	63122490	63125024	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_63123449_63124082
H1_mix_00064119	chr3	+	4838	10	FSM	ENSG00000187098.18	ENST00000642352.1	4767	10	-77	6	-51	-2	multi-exon	FALSE	canonical	2	5	junction_4	2.87174399629335	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATAGTGGTGGCCTATTG	NA	False	NA	1	True	ATTAAA	-14	NA	69739404	69968330	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_69739702_69879133_69879384_69937821_69938050_69939097_69939182_69941235_69941332_69949050_69949169_69951829_69951887_69956454_69956531_69959272_69959421_69964846
H1_mix_00064121	chr3	+	3068	1	Intergenic	novelGene_905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAATGTCATCTCTTG	1523	False	NA	-42	True	ATTAAA	-38	NA	72977954	72981022	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_72978000_72981000
H1_mix_00064122	chr3	+	3515	5	FSM	ENSG00000255423.1_ENSG00000163605.15	ENST00000470976.1	1033	5	-43	-2439	-28	556	multi-exon	FALSE	canonical	3	902	junction_2	34.8173807171074	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAACAAAGTTGCAGCAA	NA	False	NA	NA	False	NA	NA	NA	72996774	73063893	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_72997072_72998076_72998159_73047185_73047357_73059036_73059131_73061022
H1_mix_00064130	chr3	+	3722	3	FSM	ENSG00000185008.17	ENST00000470802.1	9570	3	5748	100	-55	-100	multi-exon	FALSE	canonical	1	1	junction_1	3	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGATAACAGTACCATTG	NA	False	NA	NA	False	AATAAA	-26	NA	77634869	77649400	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_77635044_77644703_77644905_77646053
H1_mix_00064131	chr3	+	1579	3	NNC	ENSG00000175161.14	novel	551	2	NA	NA	-23	82113	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	6	330	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCGGGTTTCATTTCTTT	-23	True	NA	13	True	AATAAA	-16	NA	84958965	85042551	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_84959493_84959589_84959669_85041578
H1_mix_00064133	chr3	+	664	2	FSM	ENSG00000083937.10	ENST00000466696.1	664	2	0	0	0	0	multi-exon	FALSE	canonical	3	484	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAAAAAAAAATGAAG	NA	False	NA	NA	False	TATAAA	-44	NA	87253048	87253913	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_87253511_87253711
H1_mix_00064134	chr3	+	2762	3	NNC	ENSG00000179021.10	novel	2414	3	NA	NA	15	394	at_least_one_novel_splicesite	TRUE	canonical	3	32	junction_2	56.5	13	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCGTGTAAAGCACAAATAA	25	True	NA	NA	False	ATTAAA	-9	NA	88150001	88158359	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_88150186_88153229_88153472_88156023
H1_mix_00064135	chr3	+	1666	4	Intergenic	novelGene_915	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	11	junction_2	4.32049379893857	312	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCACTCTCTGTAACTCA	NA	False	NA	16	True	ATTAAA	-22	NA	90083295	90178104	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_90083613_90160159_90160267_90176775_90176892_90176978
H1_mix_00064136	chr3	+	1692	5	Intergenic	novelGene_916	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	7.32717544487642	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATAGCACTCTCTGTAAC	NA	False	NA	13	True	ATTAAA	-19	NA	90083310	90178101	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_90083613_90132396_90132441_90160159_90160267_90176775_90176892_90176978
H1_mix_00064138	chr3	+	3659	11	FSM	ENSG00000169379.17	ENST00000335438.7	3659	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	22.639787984873	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGTTTCTCTTTTCAA	27	True	NA	8	True	AATAAA	-16	NA	93980189	94055279	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_93980483_93995873_93995945_93996562_93996685_94003658_94003909_94035330_94035437_94036551_94036755_94039879_94039989_94043014_94043241_94049405_94049523_94050823_94050893_94053186
H1_mix_00064139	chr3	+	716	1	FSM	ENSG00000243547.1	ENST00000485383.1	1386	1	18	652	18	-652	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGCTGTGGACGCCCAGTG	198	False	NA	NA	False	NA	NA	NA	96349571	96350287	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_96349600_96350300
H1_mix_00064140	chr3	+	339	1	FSM	ENSG00000243547.1	ENST00000485383.1	1386	1	950	97	950	-97	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAGATTGGATCATTACC	1130	False	NA	NA	False	NA	NA	NA	96350503	96350842	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_96350500_96350800
H1_mix_00064142	chr3	+	860	7	FSM	ENSG00000113966.10	ENST00000496713.1	851	7	-9	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	25.2548125226769	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATATCAAATTCCATTT	-7	True	NA	NA	False	NA	NA	NA	97764757	97791347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_97764978_97768080_97768231_97780158_97780221_97780614_97780684_97784954_97785050_97787989_97788120_97791213
H1_mix_00064143	chr3	+	675	3	FSM	ENSG00000113966.10	ENST00000476753.1	675	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	30.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGTGCGCTTTGTTTAT	NA	False	NA	11	True	AATAAA	-20	NA	97785016	97798535	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_97785050_97787989_97788120_97798023
H1_mix_00064144	chr3	+	1690	1	FSM	ENSG00000230301.6	ENST00000615035.3	1113	1	-419	-158	-419	158	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTATTCAATGTGGCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	98263824	98265514	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_98263800_98265500
H1_mix_00064145	chr3	+	2545	1	FSM	ENSG00000244153.1	ENST00000466609.1	2769	1	126	98	126	-98	mono-exon	FALSE	NA	NA	NA	NA	NA	474	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATCTCTTGGATCTACCA	NA	False	NA	NA	False	AAAAAG	-40	NA	98657927	98660472	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_98657900_98660500
H1_mix_00064150	chr3	+	3373	10	FSM	ENSG00000064225.13	ENST00000613264.5	3399	10	26	0	16	0	multi-exon	FALSE	canonical	2	4	junction_1	16.485684025171	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGGATGGCGCTGGT	22	False	NA	NA	False	AATAAA	-19	NA	98732729	98795845	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_98733012_98768429_98768530_98770878_98770957_98772812_98772917_98773919_98773984_98784944_98785041_98788035_98788223_98788325_98788464_98791840_98791994_98793674
H1_mix_00064153	chr3	+	1574	14	Fusion	ENSG00000036054.13_ENSG00000114021.12	novel	7233	10	NA	NA	-2636	0	multi-exon	FALSE	canonical	1	1	junction_1	136.137287128639	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTAATTCGGCCT	NA	False	NA	10	True	ATTAAA	-15	NA	100313226	100355351	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr3_+_100313304_100316098_100316188_100319068_100319205_100320776_100320972_100334628_100334799_100339086_100339206_100339814_100339936_100341072_100341162_100345584_100345679_100346180_100346256_100348802_100348882_100352403_100352503_100354771_100354828_100355176
H1_mix_00064155	chr3	+	640	7	NIC	ENSG00000114021.12	novel	1469	9	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	182.709848910476	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTTTTTTTAATTCGGC	43	False	NA	8	True	ATTAAA	-13	NA	100334775	100355349	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_100334799_100339814_100339936_100341072_100341162_100348802_100348882_100352403_100352503_100354771_100354828_100355176
H1_mix_00064156	chr3	+	1244	10	NIC	ENSG00000114021.12	novel	7233	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	114.845575329829	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTAATTCGGCCT	43	False	NA	10	True	ATTAAA	-15	NA	100334775	100355351	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_100335113_100339086_100339206_100339814_100339936_100341072_100341162_100345584_100345679_100346180_100346256_100348802_100348882_100352403_100352503_100354771_100354828_100355176
H1_mix_00064157	chr3	+	1624	7	NIC	ENSG00000181458.10	novel	1910	8	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_1	53.2585413076834	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGAAATCTTTGTTTTT	25	True	NA	16	True	AATAAA	-25	NA	100492637	100577444	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_100492929_100519532_100519609_100555208_100555402_100556759_100556973_100558404_100558590_100568821_100568968_100576924
H1_mix_00064158	chr3	+	2028	9	FSM	ENSG00000114354.15	ENST00000620299.5	2028	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	379.922607250477	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	3	True	NA	18	True	AATAAA	-15	NA	100709413	100748964	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_100709722_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736717_100744832_100744932_100747413_100747455_100748148
H1_mix_00064159	chr3	+	5864	7	FSM	ENSG00000114354.15	ENST00000676010.1	5864	7	0	0	0	0	multi-exon	FALSE	canonical	3	683	junction_1	117.175675329348	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	6	True	NA	18	True	AATAAA	-15	NA	100709439	100748964	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_100709722_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100736717_100744832_100744932_100748148
H1_mix_00064160	chr3	+	3271	2	FSM	ENSG00000114354.15	ENST00000481203.1	3271	2	0	0	0	0	multi-exon	FALSE	canonical	3	905	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGTGGTCTTGAAATTTT	5817	False	NA	17	True	AATAAA	-14	NA	100742475	100748963	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_100744932_100748148
H1_mix_00064161	chr3	+	397	1	FSM	ENSG00000232830.5	ENST00000468519.1	406	1	-3	12	-3	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGGGAAATAAAAGTCTTT	NA	False	NA	NA	False	NA	NA	NA	101414224	101414621	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_101414200_101414600
H1_mix_00064162	chr3	+	6601	2	Intergenic	novelGene_919	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	4	junction_1	0	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACCTAGTCTCAGATTTTT	11	False	NA	NA	False	AATAAA	-18	NA	101632503	101642810	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_101632806_101636511
H1_mix_00064165	chr3	+	3392	9	NNC	ENSG00000144815.17	novel	8568	8	NA	NA	-11	114	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_4	61.2922048469461	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTGTTTGTTTGTTT	-12	True	NA	17	True	ACTAAA	-14	NA	101779190	101822937	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_101779325_101782109_101782291_101782659_101782781_101785401_101785690_101798657_101798756_101801234_101801990_101807052_101807127_101816794_101817002_101821403
H1_mix_00064167	chr3	+	3811	11	NIC	ENSG00000144802.11	novel	3923	12	NA	NA	0	-1	intron_retention	FALSE	canonical	2	10	junction_9	23.6507927985512	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATTTGTCTTACATGCAT	0	True	NA	18	True	AATAAA	-14	NA	101849513	101861021	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_101849918_101852084_101852225_101852737_101852769_101852885_101852990_101853090_101853864_101854577_101854684_101855061_101855209_101855394_101855459_101855732_101855903_101857291_101857460_101859317
H1_mix_00064170	chr3	+	602	1	FSM	ENSG00000239997.1	ENST00000496394.1	590	1	-181	169	-181	-169	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGACAGCTTAGTACAGA	NA	False	NA	NA	False	AAGAAA	-8	NA	106848489	106849091	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_106848500_106849100
H1_mix_00064172	chr3	+	4901	2	FSM	ENSG00000243701.8	ENST00000660597.1	5519	2	28	590	0	-590	multi-exon	FALSE	canonical	3	12	junction_1	0	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGCATAGCTGTAGAAAAC	-1	True	NA	NA	False	NA	NA	NA	107240691	107250512	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_107241088_107246007
H1_mix_00064173	chr3	+	266	4	FSM	ENSG00000114439.19	ENST00000454540.5	392	4	126	0	126	0	multi-exon	FALSE	canonical	2	2	junction_1	18.7320284243028	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAAGGGGTTGGAAAACG	418	False	NA	-77	True	AATAGA	-22	NA	107523579	107710499	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_107523652_107526326_107526399_107645835_107645910_107710451
H1_mix_00064176	chr3	+	1249	6	NNC	ENSG00000289358.1	novel	913	3	NA	NA	15	-13929	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	6.18384993349612	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGTACATCGTACAAAAAT	13	False	NA	NA	False	TTTAAA	-40	NA	109337754	109366045	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_109337981_109343506_109343651_109346915_109347174_109352998_109353223_109354399_109354604_109365852
H1_mix_00064179	chr3	+	5987	18	FSM	ENSG00000144824.21	ENST00000431670.7	6042	18	-2	57	-2	-5	multi-exon	FALSE	canonical	2	6	junction_1	36.3569386722724	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGACATCATATTGTTGT	-4	True	NA	8	True	AATGAA	-16	NA	111859262	111976460	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_111859577_111884063_111885413_111913318_111913703_111919071_111919216_111920281_111920420_111932268_111932398_111939474_111939631_111940534_111940646_111945267_111945358_111948931_111949076_111952571_111952713_111953929_111954030_111962107_111962313_111966612_111966704_111967677_111967825_111969689_111969910_111973731_111973818_111974422
H1_mix_00064180	chr3	+	5826	17	FSM	ENSG00000144824.21	ENST00000412622.5	5996	17	121	49	10	1	multi-exon	FALSE	canonical	2	6	junction_1	40.4565739404611	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCATATTGTTGTCTGTTT	11	False	NA	14	True	AATGAA	-22	NA	111859300	111976466	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_111859577_111884063_111885413_111913318_111913703_111919071_111919216_111920281_111920420_111939474_111939631_111940534_111940646_111945267_111945358_111948931_111949076_111952571_111952713_111953929_111954030_111962107_111962313_111966612_111966704_111967677_111967825_111969689_111969910_111973731_111973818_111974422
H1_mix_00064181	chr3	+	1333	5	FSM	ENSG00000144834.14	ENST00000393917.6	1488	5	153	2	-30	0	multi-exon	FALSE	canonical	1	1	junction_1	9.12414379544733	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGTGTAAAGTTCATTC	22	False	NA	6	True	AATAAA	-18	NA	111998891	112013885	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_111999115_111999246_111999603_112000771_112000947_112011762_112011866_112013409
H1_mix_00064182	chr3	+	2198	1	FSM	ENSG00000261488.1	ENST00000563632.1	1937	1	-315	54	-315	-54	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGGACTGCTCTTGTGAA	NA	False	NA	NA	False	AAGAAA	-7	NA	112133107	112135305	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_112133100_112135300
H1_mix_00064183	chr3	+	1275	2	Antisense	novelGene_ENSG00000243081.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGGTCCTGGCTCTTGT	NA	False	NA	NA	False	AAAACA	-35	NA	112406174	112419707	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr3_+_112406194_112418451
H1_mix_00064184	chr3	+	2733	1	Intergenic	novelGene_923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGAGTCAGCGAAGGGA	NA	False	NA	NA	False	NA	NA	NA	112420272	112423005	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_112420300_112423000
H1_mix_00064189	chr3	+	696	1	FSM	ENSG00000241889.1	ENST00000478867.1	734	1	-17	55	-17	-55	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGACGTTCATTCTGTGC	362	False	NA	NA	False	NA	NA	NA	113885280	113885976	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_113885300_113886000
H1_mix_00064193	chr3	+	590	6	FSM	ENSG00000163389.12	ENST00000476573.5	567	6	-23	0	-23	0	multi-exon	FALSE	canonical	1	1	junction_1	58.0220647684999	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCTACAGCATATTTCC	NA	False	NA	NA	False	ATTAAA	-45	NA	119468939	119485357	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_119469007_119469819_119469911_119471308_119471453_119477312_119477449_119480050_119480173_119485327
H1_mix_00064194	chr3	+	1384	10	FSM	ENSG00000163389.12	ENST00000497447.5	1361	10	-23	0	-23	0	multi-exon	FALSE	canonical	1	1	junction_5	67.6116360794008	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCCATGGGTTCACTATA	NA	False	NA	NA	False	NA	NA	NA	119468939	119490667	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_119469107_119469819_119469911_119471308_119471453_119477312_119477449_119478333_119478475_119479907_119480173_119485327_119485388_119486832_119487037_119488928_119488988_119490550
H1_mix_00064198	chr3	+	477	2	FSM	ENSG00000183833.16	ENST00000488533.5	475	2	-2	0	-2	0	multi-exon	FALSE	canonical	3	30	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTCAATGGGATAAATTTA	-17	True	NA	NA	False	AATGAA	-23	NA	119703041	119707104	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_119703223_119706808
H1_mix_00064199	chr3	+	1302	3	NNC	ENSG00000286735.1	novel	1466	3	NA	NA	40767	2240	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	25.5	217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTATTTTATTTTTG	10	False	NA	NA	False	NA	NA	NA	120489740	120511915	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_120490051_120499505_120499580_120510997
H1_mix_00064200	chr3	+	807	3	NNC	ENSG00000286735.1	novel	1466	3	NA	NA	40766	-6907	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	29.5	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGCTTTCCCTTTTCTGT	9	False	NA	NA	False	NA	NA	NA	120489739	120502768	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_120490051_120499505_120499580_120502346
H1_mix_00064201	chr3	+	289	1	FSM	ENSG00000240452.1	ENST00000496868.1	288	1	-1	0	-1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTAGACGAAAAAGGAAGGA	NA	False	NA	NA	False	CATAAA	-2	NA	120722022	120722311	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_120722000_120722300
H1_mix_00064202	chr3	+	3159	5	NIC	ENSG00000153767.10	novel	551	3	NA	NA	6980	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	114.881188625466	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAGTTTGTTCATTTTAA	6981	False	NA	22	True	AATAAA	-16	NA	120749741	120783069	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_120749952_120750522_120751001_120770727_120770930_120776422_120776665_120781042
H1_mix_00064205	chr3	+	1651	16	FSM	ENSG00000065485.20	ENST00000489923.5	1651	16	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_11	129.08006128842	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGGTATGGTTTATTT	-40	True	NA	13	True	AATAAA	-14	NA	123067061	123162104	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_123067207_123089167_123089295_123092354_123092443_123102410_123102495_123102750_123102797_123106748_123106842_123110943_123111005_123116230_123116299_123124065_123124158_123124271_123124344_123145521_123145593_123146117_123146260_123150233_123150365_123154970_123155042_123161320_123161456_123161879
H1_mix_00064206	chr3	+	2221	16	ISM	ENSG00000065485.20	ENST00000316218.12	1844	17	47	0	10	0	intron_retention	FALSE	canonical	3	299	junction_12	36.654785953997	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGGTATGGTTTATTT	-30	True	NA	13	True	AATAAA	-14	NA	123067071	123162104	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_123067207_123089167_123089295_123092354_123092443_123102410_123102495_123102750_123102797_123106748_123106842_123110943_123111005_123116230_123116299_123124065_123124158_123124271_123124344_123130479_123130617_123145521_123145593_123146098_123146260_123150233_123150365_123154970_123155042_123161320
H1_mix_00064208	chr3	+	395	4	FSM	ENSG00000065485.20	ENST00000472319.5	395	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	145.549533378389	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGTGTTACGATCTCAG	NA	False	NA	NA	False	NA	NA	NA	123124065	123146258	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_123124158_123124271_123124344_123145521_123145593_123146098
H1_mix_00064211	chr3	+	742	3	FSM	ENSG00000160145.16	ENST00000498499.1	894	3	152	0	152	0	multi-exon	FALSE	canonical	2	5	junction_1	3.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGTGGAAGAGCTTCGCT	NA	False	NA	NA	False	NA	NA	NA	124268742	124326085	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_124269256_124298790_124298914_124325979
H1_mix_00064212	chr3	+	479	4	FSM	ENSG00000160145.16	ENST00000494648.1	562	4	42	41	42	-41	multi-exon	FALSE	canonical	2	5	junction_1	1.24721912892465	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTTTGTGGAGGGTCTC	NA	False	NA	NA	False	NA	NA	NA	124455176	124462633	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_124455360_124456609_124456729_124461889_124461957_124462523
H1_mix_00064213	chr3	+	321	3	FSM	ENSG00000160145.16	ENST00000473056.1	587	3	0	266	0	-266	multi-exon	FALSE	canonical	2	3	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTACTGCTCTCTGCTA	NA	False	NA	NA	False	AATAAA	-13	NA	124488287	124491424	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_124488316_124490693_124490885_124491322
H1_mix_00064214	chr3	+	402	3	NNC	ENSG00000180767.11	novel	1917	3	NA	NA	14	-2068	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	24.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGGGAATAAAAGGAGTGAA	19	False	NA	NA	False	NA	NA	NA	126524168	126541223	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_126524430_126536270_126536354_126541165
H1_mix_00064216	chr3	+	1026	8	NIC	ENSG00000159685.11	novel	1000	8	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_4	139.871369479247	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACTGGCAAACAGTCACT	-39	True	NA	22	True	AATAAA	-28	NA	126704202	126960406	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_126704400_126727077_126727187_126730560_126730631_126733077_126733223_126852643_126852731_126914679_126914751_126957415_126957552_126960195
H1_mix_00064219	chr3	+	521	5	FSM	ENSG00000058262.10	ENST00000481210.5	521	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	455.05020327432	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATTATTATGCTAACATC	-6	True	NA	NA	False	NA	NA	NA	128052425	128060211	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_128052560_128055515_128055582_128055672_128055752_128056708_128056841_128060101
H1_mix_00064221	chr3	+	2028	6	NIC	ENSG00000132394.11	novel	2205	7	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_5	66.9728303120004	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTACTGGTGTCTCTCTCTC	35	True	NA	12	True	AATAAA	-22	NA	128153496	128408642	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_128153824_128246835_128247044_128262127_128262225_128264616_128264782_128341232_128341890_128408068
H1_mix_00064225	chr3	+	3157	17	FSM	ENSG00000177646.20	ENST00000681319.1	3144	17	-13	0	-3	0	multi-exon	FALSE	canonical	3	202	junction_1	21.5970737311794	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTGTACTGTTAGCCTT	-29	True	NA	14	True	TATAAA	-9	NA	128879600	128913099	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_128879842_128884652_128884747_128893554_128893657_128895309_128895417_128896435_128896537_128897631_128897711_128899286_128899462_128901275_128901350_128902552_128902629_128904061_128904133_128904385_128904506_128906120_128906250_128908184_128909100_128909343_128909422_128910020_128910150_128910740_128910814_128912506
H1_mix_00064229	chr3	+	3758	17	FSM	ENSG00000177646.20	ENST00000679715.1	3748	17	-10	0	-10	0	multi-exon	FALSE	canonical	3	201	junction_12	21.6938931499166	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAGCCTTTGCTGTACTT	3483	False	NA	24	True	TATAAA	-19	NA	128883112	128913109	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_128884747_128893554_128893657_128895309_128895417_128896435_128896537_128897631_128897711_128899286_128899462_128901275_128901350_128902552_128902629_128904061_128904133_128904385_128904506_128906120_128906250_128908184_128908265_128908972_128909100_128909343_128909422_128910020_128910150_128910740_128910814_128912506
H1_mix_00064230	chr3	+	2535	8	FSM	ENSG00000114654.8	ENST00000683648.1	3019	8	295	189	-30	-187	multi-exon	TRUE	canonical	1	4	junction_1	2.74791200881019	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCATTAACTCCTGAACTG	-4	True	NA	NA	False	NA	NA	NA	129001598	129040553	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_129002325_129003793_129004078_129030702_129030861_129032818_129032967_129034163_129034330_129036976_129037118_129038830_129038901_129039711
H1_mix_00064231	chr3	+	627	1	FSM	ENSG00000273174.1	ENST00000608909.1	565	1	-67	5	-67	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCATTTCCTCTTTTGGTG	2556	False	NA	NA	False	AATAAA	-13	NA	129123371	129123998	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_129123400_129124000
H1_mix_00064235	chr3	+	1514	6	FSM	ENSG00000183624.14	ENST00000417226.6	1490	6	-24	0	-6	0	multi-exon	FALSE	canonical	0	0	junction_4	254.189692946036	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGCCTACATTTTGGAA	-26	True	NA	44	True	AATAAA	-15	NA	129278821	129305293	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_129278906_129279709_129279916_129288853_129288998_129298353_129298536_129301949_129302143_129304588
H1_mix_00064238	chr3	+	4165	31	FSM	ENSG00000163913.14	ENST00000296266.7	4151	31	-14	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	50.7145497422146	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAATGTGTTTCTTGCCC	1	True	NA	12	True	AATAAA	-12	NA	129440124	129520345	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_129440372_129449870_129449938_129451913_129451999_129458598_129458678_129460853_129461007_129461227_129461305_129463559_129463627_129464634_129464782_129466889_129467067_129469341_129469418_129476314_129476507_129476662_129476802_129478015_129478219_129479784_129479923_129481529_129481695_129483484_129483683_129488256_129488398_129492140_129492195_129495445_129495608_129499901_129500069_129502710_129502883_129504318_129504422_129506408_129506550_129507667_129507763_129512311_129512413_129514388_129514555_129515487_129515600_129517468_129517595_129519106_129519187_129519567_129519733_129520175
H1_mix_00064241	chr3	+	3590	28	FSM	ENSG00000163913.14	ENST00000691583.1	3922	28	195	137	4	0	multi-exon	FALSE	canonical	3	22	junction_15	34.2380915586755	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTTTCTTGCCCAGAT	52	True	NA	16	True	AATAAA	-16	NA	129440319	129520349	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_129440372_129449870_129449938_129451913_129451999_129458598_129458678_129461227_129461305_129463559_129463627_129464634_129464782_129469341_129469418_129476314_129476507_129476662_129476802_129478015_129478219_129479784_129479923_129481529_129481695_129483484_129483683_129488256_129488398_129495445_129495608_129499901_129500069_129502710_129502883_129504318_129504422_129506408_129506550_129507667_129507763_129512311_129512413_129514388_129514555_129515487_129515600_129517468_129517595_129519106_129519187_129519567_129519733_129520175
H1_mix_00064242	chr3	+	3620	29	NIC	ENSG00000163913.14	novel	3952	29	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_8	37.9128296630735	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTTTCTTGCCCAGAT	-32	True	NA	16	True	AATAAA	-16	NA	129440235	129520349	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_129440372_129449870_129449938_129451913_129451999_129458598_129458678_129461227_129461305_129463559_129463627_129464634_129464782_129469341_129469418_129476425_129476507_129476662_129476802_129478015_129478219_129479784_129479923_129481529_129481695_129483484_129483683_129488256_129488398_129492140_129492195_129495445_129495608_129499901_129500069_129502710_129502883_129504318_129504422_129506408_129506550_129507664_129507763_129512311_129512413_129514388_129514555_129515487_129515600_129517468_129517595_129519106_129519187_129519567_129519733_129520175
H1_mix_00064249	chr3	+	569	2	FSM	ENSG00000249846.7	ENST00000507856.1	569	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTGCTCCAGATGGACT	1804	False	NA	NA	False	ATTAAA	-6	NA	130112549	130119430	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_130112745_130119056
H1_mix_00064250	chr3	+	3714	28	FSM	ENSG00000017260.20	ENST00000533801.6	3690	28	-24	0	0	0	multi-exon	FALSE	canonical	2	8	junction_27	127.050566173014	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCCCAAGCTGTGGTGC	-6	True	NA	37	True	ATTAAA	-31	NA	130893990	131016709	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_130894338_130894589_130894776_130930415_130930527_130932021_130932139_130934621_130934712_130937427_130937464_130940629_130940692_130941590_130941700_130953820_130953977_130955011_130955081_130956103_130956180_130959274_130959342_130963970_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605_130997754_130998293_130998390_130999517_130999660_131016151
H1_mix_00064253	chr3	+	3439	28	FSM	ENSG00000017260.20	ENST00000513801.5	3439	28	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_27	122.414293525141	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCAAGCTGTGGTGCATT	-18	True	NA	40	True	ATTAAA	-34	NA	130894177	131016712	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_130894338_130930415_130930527_130932021_130932139_130934621_130934712_130937427_130937464_130940629_130940692_130941590_130941700_130953820_130953977_130955011_130955081_130956103_130956180_130959274_130959342_130963970_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605_130997754_130998293_130998390_130999517_130999660_131001219_131001315_131016151
H1_mix_00064255	chr3	+	3401	28	FSM	ENSG00000017260.20	ENST00000359644.7	3401	28	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_27	105.018059718036	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTATTAAATATTATTCTC	78	False	NA	-3	True	AATACA	-4	NA	130894640	131016669	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_130894776_130930415_130930527_130932021_130932139_130934621_130934712_130937427_130937464_130940629_130940692_130941590_130941700_130953820_130953977_130955011_130955081_130956103_130956180_130959274_130959342_130963970_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605_130997754_130998293_130998390_130999517_130999660_131001219_131001345_131016151
H1_mix_00064258	chr3	+	584	3	FSM	ENSG00000081307.15	ENST00000464101.2	570	3	-14	0	0	0	multi-exon	FALSE	canonical	3	417	junction_2	31	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTACCAGTGGCTTATT	-38	True	NA	NA	False	AGTAAA	-24	NA	132660328	132666151	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_132660699_132665822_132665869_132665983
H1_mix_00064262	chr3	+	735	5	NIC	ENSG00000144868.14	novel	3727	6	NA	NA	-3	-12	combination_of_known_junctions	FALSE	canonical	2	10	junction_3	59.6170068017508	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCATTGATTGCTTCTC	26	False	NA	6	True	AATAAA	-19	NA	133038413	133396216	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_133038436_133045901_133046021_133229265_133229352_133390179_133390335_133395863
H1_mix_00064263	chr3	+	471	3	FSM	ENSG00000091527.17	ENST00000504867.5	471	3	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	236	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTTTACTATTTCAGTT	80	False	NA	NA	False	AATAAA	-38	NA	133574497	133584150	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_133574743_133575038_133575116_133584001
H1_mix_00064264	chr3	+	448	4	FSM	ENSG00000091527.17	ENST00000507408.5	448	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	255.911877193867	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCCTGCAGTCAACTGCC	-2	True	NA	NA	False	AAAACA	-41	NA	133574637	133586682	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_133574743_133575038_133575116_133584004_133584151_133586562
H1_mix_00064265	chr3	+	392	3	FSM	ENSG00000144867.13	ENST00000484684.1	512	3	120	0	-80	0	multi-exon	FALSE	canonical	3	279	junction_1	5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGTCCATTACTGACAGCT	NA	False	NA	NA	False	NA	NA	NA	133805734	133807774	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_133806003_133806608_133806704_133807745
H1_mix_00064266	chr3	+	852	4	FSM	ENSG00000144867.13	ENST00000481356.1	1487	4	635	0	-227	0	multi-exon	FALSE	canonical	3	267	junction_2	7.11805216802087	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGGAATTTTTTTTTTT	5075	False	NA	18	True	NA	NA	NA	133810896	133819909	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_133811200_133815589_133815727_133816877_133816933_133819552
H1_mix_00064268	chr3	+	2723	15	FSM	ENSG00000182923.20	ENST00000683596.1	2723	15	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_14	75.920507568033	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTCTCATACGAATAT	NA	False	NA	14	True	AATAAA	-14	NA	134485698	134561767	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_134486053_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134547334_134547473_134549061_134549177_134550062_134550261_134551925_134552013_134558141_134558348_134559149_134559430_134561376
H1_mix_00064270	chr3	+	2565	14	FSM	ENSG00000182923.20	ENST00000682402.1	2549	14	-16	0	0	0	multi-exon	FALSE	canonical	3	10	junction_13	76.8539689565783	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACCACTTTGCTAGACT	-3	True	NA	-4	True	TTTAAA	-29	NA	134486204	134561749	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_134486557_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134558141_134558348_134559149_134559430_134561376
H1_mix_00064272	chr3	+	1918	12	FSM	ENSG00000182923.20	ENST00000512894.6	1912	12	-6	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	58.9566306493227	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATTAACACTATTTTGC	-3	True	NA	-4	True	AATAAA	-10	NA	134486204	134575004	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_134486557_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134574792
H1_mix_00064273	chr3	+	1798	13	FSM	ENSG00000073711.11	ENST00000490467.5	1782	13	-16	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	26.9241475672346	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTACCATCGCCTTCC	-21	True	NA	NA	False	NA	NA	NA	135965727	136145384	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_135965850_136026831_136027099_136040858_136040963_136049258_136049362_136070477_136070553_136078366_136078454_136082264_136082422_136087882_136087932_136090577_136090668_136102006_136102183_136103257_136103377_136106215_136106323_136145042
H1_mix_00064275	chr3	+	581	1	FSM	ENSG00000227267.3	ENST00000477611.1	581	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTTTAAAAACAAATTGC	NA	False	NA	NA	False	NA	NA	NA	136055183	136055764	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_136055200_136055800
H1_mix_00064276	chr3	+	1989	5	NIC	ENSG00000158092.7	novel	1937	4	NA	NA	3	-6	intron_retention	FALSE	canonical	1	3	junction_1	84.1620460777897	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCAGTGCTTCTCCCTCA	21	True	NA	1	True	AATAAA	-15	NA	136862244	136949120	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_136862320_136867430_136867526_136927983_136928228_136945582_136946296_136948258
H1_mix_00064278	chr3	+	3013	23	FSM	ENSG00000114098.18	ENST00000481646.5	3043	23	30	0	-4	0	multi-exon	FALSE	canonical	3	99	junction_2	78.6746228525548	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAAAAAGAAAAAGTT	2	True	NA	42	True	TATAAA	-6	NA	138187296	138296549	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_138187600_138188454_138188531_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
H1_mix_00064281	chr3	+	2654	23	NIC	ENSG00000114098.18	novel	3043	23	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	90.6399196895182	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACAGTTTGAATGAAATG	19	True	NA	102	True	TATAAA	-17	NA	138187554	138296394	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_138187600_138188400_138188531_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
H1_mix_00064285	chr3	+	4078	6	NIC	ENSG00000158186.13	novel	1534	5	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	10.1862652625975	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTCTTAGTTCCTTTT	0	True	NA	12	True	AATAAA	-14	NA	138348863	138405533	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_138349033_138372865_138373077_138397323_138397478_138398468_138398569_138400533_138400614_138402169
H1_mix_00064289	chr3	+	1219	8	FSM	ENSG00000175110.14	ENST00000310776.9	1202	8	-17	0	-1	0	multi-exon	FALSE	canonical	3	79	junction_1	139.214560580246	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAGCAAAAATTATTACCC	-10	True	NA	19	True	ATTAAA	-26	NA	139344002	139357129	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_139344199_139346880_139347045_139348159_139348325_139350178_139350323_139350976_139351061_139352646_139352793_139355681_139355791_139356918
H1_mix_00064297	chr3	+	903	2	FSM	ENSG00000114120.14	ENST00000502756.1	796	2	-39	-68	-26	68	multi-exon	FALSE	canonical	3	271	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTCCTGATGGTTTGG	-32	True	NA	NA	False	NA	NA	NA	140941803	140957137	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_140942096_140956526
H1_mix_00064306	chr3	+	3160	8	FSM	ENSG00000155893.13	ENST00000393010.6	3160	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	104.182336236396	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTAATGGTTTGTACCTA	28	True	NA	25	True	AATAAA	-25	NA	141231860	141294644	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_141231912_141234215_141234319_141234885_141234957_141260122_141260255_141278341_141278501_141279377_141279505_141287313_141287454_141292267
H1_mix_00064310	chr3	+	551	2	FSM	ENSG00000241570.8	ENST00000493825.1	576	2	25	0	25	0	multi-exon	FALSE	canonical	2	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAGAAAAGAAA	287	False	NA	NA	False	NA	NA	NA	142964464	142965124	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_142964637_142964745
H1_mix_00064311	chr3	+	3196	27	FSM	ENSG00000163714.18	ENST00000488497.7	3557	27	361	0	5	0	multi-exon	FALSE	canonical	0	0	junction_14	238.469193425519	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAACGGTCTGTTTTTTA	4	False	NA	NA	False	NA	NA	NA	143001528	143056500	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_143001674_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841_143016976_143019968_143020037_143020598_143020694_143021349_143021386_143021472_143021556_143022496_143022663_143022852_143023065_143027148_143027254_143028339_143028407_143028482_143028647_143032783_143032947_143033270_143033351_143034887_143034976_143035981_143036105_143037178_143037336_143038107_143038204_143038893_143038961_143043116_143043277_143050938_143051050_143053675_143053795_143054942_143055120_143056311
H1_mix_00064314	chr3	+	3312	27	NIC	ENSG00000163714.18	novel	3491	28	NA	NA	-4	-9	combination_of_known_junctions	FALSE	canonical	3	164	junction_26	171.175746222047	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTATAATGTTGTTTTTT	19	True	NA	12	True	AATAAA	-12	NA	143001616	143056837	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_143001674_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841_143016976_143019968_143020037_143020598_143020694_143021349_143021386_143021472_143021556_143022496_143022663_143022852_143023065_143023974_143024019_143027148_143027254_143028339_143028411_143028486_143028647_143032783_143032947_143033270_143033351_143034887_143034976_143035981_143036105_143037178_143037336_143038107_143038204_143038893_143038961_143043116_143043277_143050938_143051050_143053675_143053795_143056311
H1_mix_00064315	chr3	+	2855	13	FSM	ENSG00000163714.18	ENST00000480029.5	2855	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	233.722235427726	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGAAGGAAAGGTATAACA	149	False	NA	NA	False	AAAAAG	-17	NA	143025781	143053782	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_143027254_143028339_143028407_143028482_143028647_143032783_143032947_143033270_143033351_143034887_143034976_143035981_143036105_143037178_143037336_143038107_143038204_143038893_143038961_143043116_143043277_143050938_143051050_143053675
H1_mix_00064318	chr3	+	254	2	Antisense	novelGene_ENSG00000205412.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	687	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCATTTTCTGGTAGAGA	101	False	NA	NA	False	NA	NA	NA	148151953	148414944	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr3_+_148152058_148414794
H1_mix_00064319	chr3	+	1563	6	FSM	ENSG00000163754.18	ENST00000484197.5	1563	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	92.5410179325903	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTGGTTGTTTAATTAAA	21	False	NA	8	True	AATAAA	-15	NA	148991557	149027631	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_148991648_148994141_148994278_148996301_148996477_148996741_148996905_149009275_149009403_149026759
H1_mix_00064320	chr3	+	1246	2	FSM	ENSG00000163755.9	ENST00000494327.1	556	2	-21	-669	-20	669	multi-exon	FALSE	canonical	2	15	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	-42	True	NA	NA	False	NA	NA	NA	149129617	149131120	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_149129941_149130197
H1_mix_00064321	chr3	+	2503	7	FSM	ENSG00000163755.9	ENST00000462030.5	2486	7	-20	3	-20	-3	multi-exon	FALSE	canonical	1	2	junction_1	131.776852629318	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTCATCTCTTGTTATT	-42	True	NA	NA	False	AATAAA	-14	NA	149129617	149154132	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_149130454_149140003_149140499_149141016_149141189_149141294_149141381_149145353_149145547_149150598_149150681_149153493
H1_mix_00064322	chr3	+	4281	16	FSM	ENSG00000163755.9	ENST00000460120.5	2745	16	-20	-1516	-20	145	multi-exon	TRUE	canonical	3	54	junction_1	76.7163317394384	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTCTATTGCTGCTTTA	-42	True	NA	NA	False	TTTAAA	-6	NA	149129617	149173877	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_149129941_149141016_149141189_149141294_149141381_149145353_149145547_149150598_149150681_149153493_149153649_149155106_149155216_149157349_149157532_149158665_149158847_149160045_149160280_149162147_149162334_149162689_149162879_149163841_149163950_149167033_149167241_149167892_149167984_149172094
H1_mix_00064323	chr3	+	772	8	FSM	ENSG00000082996.20	ENST00000467977.5	761	8	-11	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	140.404953688993	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGCTAACTAAAACCAAAAA	-34	True	NA	NA	False	NA	NA	NA	149813203	149960765	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_149813354_149872028_149872155_149895472_149895571_149902071_149902163_149911977_149912084_149921133_149921228_149960055_149960137_149960739
H1_mix_00064325	chr3	+	767	9	FSM	ENSG00000082996.20	ENST00000467996.1	767	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	107.342617352103	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGTAGACCCTTGGCT	27	True	NA	NA	False	ACTAAA	-34	NA	149813264	149960750	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_149813354_149852515_149852597_149872028_149872155_149895472_149895561_149902071_149902163_149911977_149912084_149921133_149921228_149960055_149960137_149960739
H1_mix_00064326	chr3	+	1025	6	FSM	ENSG00000082996.20	ENST00000459632.5	1008	6	-17	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	138.206222725317	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGTAAGTAATGGATATAA	526	False	NA	NA	False	NA	NA	NA	149813819	149902159	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_149814332_149846010_149846141_149852515_149852597_149872028_149872155_149895472_149895561_149902071
H1_mix_00064328	chr3	+	1029	6	FSM	ENSG00000144895.12	ENST00000474505.5	1010	6	-19	0	0	0	multi-exon	FALSE	canonical	3	458	junction_4	46.4224083821596	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCATTATCACAAATTATTAA	90	False	NA	-29	True	TTTAAA	-14	NA	150546766	150564899	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_150546831_150552355_150552426_150558387_150558463_150562541_150562661_150563514_150563615_150564298
H1_mix_00064329	chr3	+	3474	8	ISM	ENSG00000144895.12	ENST00000273435.9	2083	14	19031	8	-1574	0	3prime_fragment	FALSE	canonical	3	466	junction_7	61.8450994544484	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTAATCACTGTTTTTA	NA	False	NA	5	True	AATGAA	-13	NA	150565824	150584234	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_150567767_150567901_150568047_150568175_150568293_150571957_150572530_150575648_150575763_150581617_150581747_150583199_150583266_150583845
H1_mix_00064331	chr3	+	10701	44	NIC	ENSG00000144893.13	novel	10794	45	NA	NA	0	12	combination_of_known_junctions	FALSE	canonical	2	7	junction_14	4.53386989263622	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGACTTTATTATTTC	-33	True	NA	17	True	AATAAA	-13	NA	151085663	151436665	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_151085937_151086797_151087026_151116337_151116443_151122782_151122975_151127824_151127985_151156160_151156331_151158688_151158800_151159831_151160102_151163892_151164043_151165419_151165520_151165845_151165983_151185329_151185462_151188353_151188481_151190716_151190932_151193489_151193667_151350058_151350207_151355120_151355240_151355895_151356040_151357212_151357377_151360473_151360606_151364978_151365207_151365849_151365992_151367645_151367767_151368149_151368252_151369435_151369550_151372566_151372767_151376025_151376215_151376799_151376875_151376990_151377179_151378011_151378174_151380112_151380225_151382655_151382746_151383778_151383889_151384082_151384219_151385029_151385192_151387809_151388173_151389978_151390136_151394655_151394868_151409242_151409333_151411277_151411508_151413138_151413296_151416311_151416423_151430298_151430381_151432751
H1_mix_00064333	chr3	+	10706	43	FSM	ENSG00000144893.13	ENST00000474524.5	10744	43	0	38	0	-38	multi-exon	FALSE	canonical	2	7	junction_13	4.54581115896498	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCCTTACAGATATAGTT	235	False	NA	NA	False	NA	NA	NA	151086888	151437034	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_151087026_151116337_151116443_151122782_151122975_151127824_151127985_151156160_151156331_151158688_151158800_151159831_151160102_151163892_151164043_151165419_151165520_151165845_151165983_151185329_151185462_151188353_151188481_151190716_151190932_151193489_151193667_151350058_151350207_151355120_151355240_151355895_151356040_151357212_151357377_151360473_151360606_151364978_151365207_151365849_151365992_151367645_151367767_151368149_151368252_151369435_151369550_151372566_151372767_151376025_151376215_151376799_151376875_151376990_151377179_151378011_151378174_151380112_151380225_151382655_151382746_151383778_151383889_151384082_151384219_151385029_151385192_151387809_151388173_151389978_151390136_151394655_151394868_151409242_151409333_151411277_151411508_151413138_151413296_151416311_151416423_151430298_151430381_151432751
H1_mix_00064334	chr3	+	1271	3	FSM	ENSG00000152601.18	ENST00000461436.1	1681	3	0	410	0	-410	multi-exon	FALSE	canonical	1	1	junction_2	9	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCTATTTTTCCATCTC	15	False	NA	NA	False	NA	NA	NA	152268905	152302039	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_152269093_152299404_152300368_152301918
H1_mix_00064336	chr3	+	901	3	FSM	ENSG00000196549.13	ENST00000491597.5	951	3	0	50	0	-50	multi-exon	FALSE	canonical	3	37	junction_1	51.5	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCACCACGCCTGGCTAAT	-4	True	NA	NA	False	NA	NA	NA	155079646	155085679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_155079757_155084157_155084328_155085058
H1_mix_00064338	chr3	+	1740	1	ISM	ENSG00000163655.16	ENST00000496455.7	8631	16	71348	283	46585	-283	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTTGTCATGAAGCTTCC	1238	False	NA	5	True	CATAAA	-21	NA	155941997	155943737	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_155942000_155943700
H1_mix_00064339	chr3	+	3246	2	FSM	ENSG00000243176.7	ENST00000667900.1	3537	2	143	148	143	-148	multi-exon	FALSE	canonical	3	4	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAGCTTGTTTATTCCAA	NA	False	NA	NA	False	CATAAA	-36	NA	157174343	157177782	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_157174556_157174748
H1_mix_00064340	chr3	+	1142	5	FSM	ENSG00000174899.13	ENST00000651325.1	1201	5	57	2	-9	-2	multi-exon	FALSE	canonical	2	3	junction_2	2.48746859276655	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTTTGTTGATAAAAGTG	NA	False	NA	NA	False	AATAAA	-17	NA	157543302	157578883	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_157543510_157553229_157553341_157571176_157571307_157571954_157572044_157578278
H1_mix_00064345	chr3	+	451	2	FSM	ENSG00000118855.21	ENST00000468409.1	685	2	234	0	234	0	multi-exon	FALSE	canonical	3	76	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTTCCCACTTAAAGTG	3722	False	NA	NA	False	TTTAAA	-9	NA	158823427	158824476	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_158823526_158824123
H1_mix_00064347	chr3	+	1638	4	FSM	ENSG00000283154.3	ENST00000638311.1	600	4	-745	-293	142	7	multi-exon	FALSE	canonical	3	17	junction_2	52.8919233489911	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTTTGCTCACTAACA	111	False	NA	22	True	AATAAA	-26	NA	159764357	159897366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_159765139_159866162_159866282_159892096_159892191_159896722
H1_mix_00064349	chr3	+	849	4	FSM	ENSG00000113810.16	ENST00000465903.5	849	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	161.823635136802	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGGATTTTTACTGTTA	-15	True	NA	NA	False	NA	NA	NA	160399637	160402867	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_160399750_160400599_160400966_160401914_160402094_160402675
H1_mix_00064350	chr3	+	584	5	FSM	ENSG00000113810.16	ENST00000485645.5	583	5	-1	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	167.811464149503	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTATGAAGTCATTCCTAA	-15	True	NA	NA	False	AAAACA	-11	NA	160399637	160404336	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_160399698_160400821_160400966_160401914_160402094_160402675_160402868_160404327
H1_mix_00064355	chr3	+	5356	23	FSM	ENSG00000113810.16	ENST00000344722.5	5356	23	0	0	0	0	multi-exon	TRUE	canonical	3	300	junction_10	70.6243115961476	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCGGAAATTCAAGTACGG	829	False	NA	13	True	AATAAA	-17	NA	160400481	160434953	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_160400966_160401914_160402094_160402675_160402868_160404327_160404505_160411919_160412085_160412325_160412454_160413472_160413614_160414366_160414518_160416250_160416416_160417722_160417957_160419357_160419544_160420739_160420902_160423424_160423651_160423760_160423841_160424866_160425020_160426073_160426201_160428752_160428943_160430598_160430744_160431031_160431206_160431642_160431826_160432282_160432516_160433025_160433210_160433656
H1_mix_00064359	chr3	+	3768	1	FSM	ENSG00000229320.3	ENST00000472924.1	1397	1	-2129	-242	276	242	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGATTGAGTCGTTATT	583	False	NA	NA	False	AATAAA	-38	NA	160565722	160569490	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_160565700_160569500
H1_mix_00064362	chr3	+	216	2	NNC	ENSG00000269888.1	novel	248	2	NA	NA	-6178	-372	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	355	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCATAGAGCTTCTTCAC	1859	False	NA	NA	False	NA	NA	NA	161422933	161429241	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_161422966_161429057
H1_mix_00064363	chr3	+	3284	2	Intergenic	novelGene_958	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	38	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGTGTCTGATTTCTT	NA	False	NA	14	True	ATTAAA	-17	NA	163907837	163920144	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_163908084_163917106
H1_mix_00064365	chr3	+	2402	9	FSM	ENSG00000163536.13	ENST00000295777.9	1907	9	-501	6	-21	0	multi-exon	FALSE	canonical	2	13	junction_1	30.0434581065496	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGTGACTAGATCTATT	15	True	NA	11	True	AATAAA	-12	NA	167735221	167825560	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_167736136_167789110_167789379_167790371_167790603_167792589_167792785_167794619_167794825_167807243_167807342_167822985_167823073_167824472_167824563_167825246
H1_mix_00064367	chr3	+	690	4	FSM	ENSG00000206120.11	ENST00000511230.2	690	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.24721912892465	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGCCCTTTGGACAAGG	4	True	NA	NA	False	NA	NA	NA	168249664	168519621	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_168250028_168309304_168309440_168314070_168314177_168519535
H1_mix_00064368	chr3	+	2639	8	FSM	ENSG00000085274.16	ENST00000602751.5	2630	8	-9	0	0	0	multi-exon	FALSE	canonical	2	17	junction_2	70.575187869797	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTACTCCTGTTATGCACT	-5	True	NA	-42	True	NA	NA	NA	169773395	169787502	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_169773463_169774264_169774562_169778883_169779562_169780589_169780750_169782464_169782644_169783476_169783561_169784621_169784709_169786415
H1_mix_00064369	chr3	+	555	3	FSM	ENSG00000173890.17	ENST00000491740.1	550	3	-5	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	8.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCTGCAACACAACTGAT	11	True	NA	NA	False	TTTAAA	-20	NA	170038198	170077276	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_170038471_170038914_170039044_170077122
H1_mix_00064370	chr3	+	1069	2	FSM	ENSG00000136603.14	ENST00000477216.1	554	2	-428	-87	-428	0	multi-exon	FALSE	canonical	2	14	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAACCAAAACTAAGTCGC	588	False	NA	NA	False	NA	NA	NA	170357249	170360160	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_170357857_170359698
H1_mix_00064371	chr3	+	599	2	FSM	ENSG00000136603.14	ENST00000490989.1	599	2	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAACCAAAACTAAGTCGC	43	False	NA	NA	False	NA	NA	NA	170358508	170360160	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_170358646_170359698
H1_mix_00064374	chr3	+	1655	1	FSM	ENSG00000243398.3	ENST00000484215.3	266	1	-1241	-148	-1241	148	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAAAATTAGGTGTTTAG	7263	False	NA	NA	False	TATAAA	-3	NA	172236084	172237739	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_172236100_172237700
H1_mix_00064375	chr3	+	4409	25	FSM	ENSG00000114346.14	ENST00000540509.5	4406	25	-3	0	0	0	multi-exon	TRUE	canonical	3	49	junction_2	158.201869765253	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATGTCTCATGTATTA	NA	False	NA	18	True	AATAAA	-19	NA	172750681	172821473	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_172750858_172752149_172752473_172754508_172754661_172755294_172755375_172756982_172757166_172758979_172759070_172760155_172760264_172761609_172761684_172762415_172762547_172762690_172762807_172762909_172762973_172764277_172764501_172769006_172769144_172773902_172774023_172782162_172782232_172783798_172783910_172784706_172784804_172786492_172786575_172802615_172802695_172802860_172802981_172805730_172805870_172807769_172807925_172815603_172815712_172816690_172816838_172820147
H1_mix_00064376	chr3	+	4363	25	FSM	ENSG00000114346.14	ENST00000417960.5	4363	25	0	0	0	0	multi-exon	FALSE	canonical	1	16	junction_3	179.741012563138	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGTCTCATGTATTAA	-28	True	NA	19	True	AATAAA	-20	NA	172750725	172821474	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_172750858_172752149_172752473_172754508_172754661_172755297_172755375_172756982_172757166_172758979_172759070_172760155_172760264_172761609_172761684_172762415_172762547_172762690_172762807_172762909_172762973_172764277_172764501_172769006_172769144_172773902_172774023_172782162_172782232_172783798_172783910_172784706_172784804_172786492_172786575_172802615_172802695_172802860_172802981_172805730_172805870_172807769_172807925_172815603_172815712_172816690_172816838_172820147
H1_mix_00064377	chr3	+	4395	26	NIC	ENSG00000114346.14	novel	4136	25	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_24	140.326054601417	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGTCTCATGTATTAA	-20	True	NA	19	True	AATAAA	-20	NA	172750733	172821474	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_172750858_172754508_172754661_172755294_172755375_172755482_172755576_172756982_172757166_172758979_172759070_172760155_172760264_172761609_172761684_172762415_172762547_172762690_172762807_172762909_172762973_172764277_172764501_172769006_172769144_172773902_172774023_172782162_172782232_172783798_172783910_172784706_172784804_172786492_172786575_172802615_172802695_172802860_172802981_172805730_172805870_172807769_172807925_172815603_172815712_172816690_172816838_172818547_172818815_172820147
H1_mix_00064386	chr3	+	2754	17	FSM	ENSG00000171109.19	ENST00000263969.9	2754	17	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	14.2619193571553	2021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGTGTGGAATGTCCTT	1001	False	NA	26	True	AGTAAA	-20	NA	179348760	179392496	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_179348964_179351899_179352036_179358839_179359003_179362357_179362483_179364296_179364406_179365117_179365226_179367438_179367593_179368035_179368104_179375219_179375342_179377041_179377169_179377343_179377449_179378340_179378444_179378584_179378815_179385568_179385722_179386432_179386630_179390003_179390139_179391980
H1_mix_00064390	chr3	+	316	3	FSM	ENSG00000136518.17	ENST00000484312.1	316	3	0	0	0	0	multi-exon	FALSE	canonical	3	881	junction_2	8.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGCTTCATTTGTCTGTG	NA	False	NA	NA	False	AGTAAA	-18	NA	179581163	179586708	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_179581221_179583352_179583449_179586545
H1_mix_00064393	chr3	+	5610	20	NIC	ENSG00000058056.10	novel	8038	21	NA	NA	-57	-2207	intron_retention	FALSE	canonical	1	2	junction_15	17.5344536188588	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTATCAAAGTTTTTAT	12	False	NA	7	True	AATGAA	-18	NA	179652974	179786935	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_179653394_179681877_179682004_179690240_179690302_179701007_179701130_179706933_179707077_179708772_179708958_179719939_179720035_179721401_179721590_179730188_179730261_179730615_179730710_179740246_179740373_179742196_179742351_179745042_179745218_179752284_179752374_179754731_179754855_179761111_179761256_179764001_179764169_179765694_179765849_179781738_179781824_179784047
H1_mix_00064395	chr3	+	7601	5	FSM	ENSG00000058056.10	ENST00000679752.1	9431	5	1830	0	-556	0	multi-exon	FALSE	canonical	3	69	junction_1	6.64736790015417	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTTTAAATTAAAAGCTAT	NA	False	NA	-14	True	NA	NA	NA	179759386	179789373	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_179761256_179764001_179764169_179765694_179765849_179781738_179781824_179784047
H1_mix_00064397	chr3	+	4585	10	FSM	ENSG00000163728.11	ENST00000412756.6	4568	10	-17	0	-13	0	multi-exon	FALSE	canonical	3	67	junction_9	9.21485649627348	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTATATGTTCGAATGTTT	-18	True	NA	6	True	ATTAAA	-19	NA	180602175	180610974	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_180602423_180602890_180603016_180603123_180603324_180604224_180604310_180604477_180604608_180604851_180605008_180605765_180605838_180606252_180606373_180606480_180606604_180607647
H1_mix_00064401	chr3	+	2381	18	NIC	ENSG00000114416.18	novel	3277	18	NA	NA	22	0	combination_of_known_junctions	TRUE	canonical	2	25	junction_16	220.646376651446	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATTTTGTTTTCAAAAT	29	True	NA	24	True	ATTAAA	-24	NA	180912512	180976553	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_180912737_180933333_180933387_180935137_180935232_180947864_180947937_180948346_180948496_180948720_180948815_180949226_180949344_180951297_180951469_180953761_180953841_180957818_180957929_180961467_180961555_180962882_180962941_180963027_180963091_180968050_180968255_180970157_180970359_180971074_180971156_180975312_180975405_180976121
H1_mix_00064403	chr3	+	308	1	FSM	ENSG00000278026.1	ENST00000610449.1	109	1	-200	1	-200	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGATATTTTACTTTGTCC	17	False	NA	NA	False	ATTAAA	-23	NA	181714984	181715292	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_181715000_181715300
H1_mix_00064407	chr3	+	4108	2	FSM	ENSG00000176597.12	ENST00000326505.4	4108	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGAGATGTGTATTTAAA	2	True	NA	9	True	AATAAA	-15	NA	183253252	183273385	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_183253473_183269497
H1_mix_00064412	chr3	+	582	4	FSM	ENSG00000114796.16	ENST00000468101.5	574	4	-8	0	-4	0	multi-exon	FALSE	canonical	3	12	junction_1	34.9380403953437	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATAGAGCTGTGCTCTC	-23	True	NA	NA	False	NA	NA	NA	183635614	183650590	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_183635748_183636220_183636312_183643479_183643543_183650295
H1_mix_00064413	chr3	+	596	2	FSM	ENSG00000114796.16	ENST00000482138.1	588	2	-8	0	-4	0	multi-exon	FALSE	canonical	3	7	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTACAGTATCTCTTTGA	-23	True	NA	NA	False	NA	NA	NA	183635614	183650758	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_183635748_183650295
H1_mix_00064414	chr3	+	7293	8	NIC	ENSG00000114796.16	novel	7331	8	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	33.6852174930046	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGTTCTGTTTTATTT	-23	True	NA	13	True	ATTAAA	-17	NA	183635614	183684519	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_183635748_183643479_183643543_183650295_183651277_183663457_183663643_183664920_183665040_183671033_183671223_183672295_183672485_183679085
H1_mix_00064417	chr3	+	2564	16	FSM	ENSG00000145191.15	ENST00000648890.1	2552	16	-12	0	0	0	multi-exon	FALSE	canonical	2	8	junction_9	73.7950314497302	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTGTATTTGGTTTGTC	-5	True	NA	6	True	ATTAAA	-7	NA	184135362	184145302	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184135581_184136611_184136737_184137619_184137806_184137897_184138076_184138165_184138247_184140079_184140158_184140417_184140731_184141924_184142071_184142236_184142395_184142501_184142604_184142778_184142887_184143051_184143143_184143441_184143566_184144098_184144225_184144596_184144708_184144883
H1_mix_00064420	chr3	+	4210	13	FSM	ENSG00000145191.15	ENST00000468748.7	4425	13	-14	229	0	-229	multi-exon	FALSE	canonical	3	245	junction_6	30.4329864894438	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTACTATGTGACAGGCA	21	True	NA	NA	False	NA	NA	NA	184135388	184145898	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184135581_184136611_184136737_184137619_184137806_184137897_184138076_184138165_184138247_184140079_184140731_184141924_184142071_184142236_184142379_184142501_184142604_184142778_184142887_184143051_184144225_184144596_184144708_184144883
H1_mix_00064421	chr3	+	3298	15	FSM	ENSG00000145191.15	ENST00000491008.6	3298	15	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_8	76.2811662635713	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTGTCTCCATCCCT	153	False	NA	15	True	ATTAAA	-16	NA	184135520	184145311	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184135581_184136611_184137806_184137897_184138076_184138165_184138247_184140079_184140158_184140417_184140731_184141924_184142071_184142236_184142395_184142501_184142604_184142778_184142887_184143051_184143143_184143441_184143566_184144098_184144225_184144596_184144708_184144883
H1_mix_00064422	chr3	+	2381	14	NIC	ENSG00000161202.20	novel	5269	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	70	junction_10	163.175441939254	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCGCTAACTGCTCGCAG	0	True	NA	14	True	AATAAA	-15	NA	184155376	184170876	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_184155797_184163656_184163727_184164266_184164389_184164491_184164602_184164795_184164932_184165112_184165207_184165421_184165492_184166125_184166266_184166445_184166523_184166605_184166674_184167579_184167712_184167897_184168066_184170005_184170222_184170318
H1_mix_00064424	chr3	+	796	4	ISM	ENSG00000161203.14	ENST00000472560.6	953	6	-62	810	0	-810	5prime_fragment	FALSE	canonical	3	3854	junction_3	310.441978833762	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGCACTGAGGGGTGGG	-28	True	NA	NA	False	AATACA	-15	NA	184174854	184180476	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_184174960_184176950_184177068_184178856_184179123_184180168
H1_mix_00064425	chr3	+	795	8	ISM	ENSG00000161203.14	ENST00000686364.1	1883	12	2260	2043	-30	-33	internal_fragment	FALSE	canonical	0	0	junction_3	1755.55355535349	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGACAGGGGGCTCAAG	74	False	NA	NA	False	TTTAAA	-28	NA	184176948	184182047	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_184177068_184178856_184179123_184180168_184180252_184180644_184180651_184180848_184180882_184181194_184181227_184181695_184181816_184181911
H1_mix_00064427	chr3	+	1783	11	ISM	ENSG00000161203.14	ENST00000292807.9	1931	12	2096	43	-28	0	3prime_fragment	FALSE	canonical	0	0	junction_3	1291.44511691361	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTCGTCCAGTTACAAA	76	False	NA	-22	True	NA	NA	NA	184176950	184184048	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_184177068_184178856_184179123_184180168_184180252_184180644_184180651_184180848_184180985_184181084_184181227_184181695_184181816_184181911_184182048_184182150_184182249_184182756_184182869_184183481
H1_mix_00064430	chr3	+	686	6	FSM	ENSG00000161204.12	ENST00000421340.5	690	6	4	0	4	0	multi-exon	FALSE	canonical	3	10	junction_3	166.784171910886	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGATGTGTCTTTTGGC	2202	False	NA	NA	False	NA	NA	NA	184186098	184187958	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184186281_184186506_184186655_184186795_184186876_184187363_184187444_184187663_184187762_184187860
H1_mix_00064431	chr3	+	661	2	FSM	ENSG00000161204.12	ENST00000463685.1	661	2	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGGGTTCTCCCTCCAA	-22	True	NA	NA	False	NA	NA	NA	184186159	184187046	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184186281_184186506
H1_mix_00064432	chr3	+	755	5	FSM	ENSG00000161204.12	ENST00000478288.5	754	5	-1	0	0	0	multi-exon	FALSE	canonical	3	377	junction_4	22.1697992773954	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGAGTCGGTTGGAATCA	-22	True	NA	NA	False	TTTAAA	-43	NA	184186159	184187901	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184186281_184186506_184186655_184186795_184186876_184187396_184187762_184187860
H1_mix_00064437	chr3	+	2331	6	FSM	ENSG00000161204.12	ENST00000466742.5	2331	6	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_2	14.9586095610521	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGCCTCATGTCTGCTG	1065	False	NA	19	True	ATTAAA	-16	NA	184189829	184194006	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184191044_184191122_184191256_184192600_184192897_184193101_184193235_184193364_184193453_184193539
H1_mix_00064443	chr3	+	5381	33	NIC	ENSG00000114867.22	novel	5129	34	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	481	junction_5	453.177314867964	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGTGCCTGTAATTATTAA	-10	True	NA	-13	True	NA	NA	NA	184314566	184335317	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_184314675_184315488_184315546_184315762_184315857_184316131_184316219_184317320_184317498_184317746_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323404_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268_184325374_184325479_184325640_184325850_184325952_184326526_184326630_184326880_184326984_184327215_184327449_184327585_184327705_184327829_184328003_184328630_184328757_184328908_184328991_184331265_184331365_184331471_184331607_184331727_184331810_184331945_184332087_184334726
H1_mix_00064445	chr3	+	4989	29	FSM	ENSG00000114867.22	ENST00000350481.9	4990	29	0	1	0	1	multi-exon	FALSE	canonical	3	68	junction_1	469.222569952748	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCACTGCCTTTCTGCTT	29	True	NA	22	True	ATTAAA	-15	NA	184314605	184335352	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184314675_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323407_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268_184325374_184325479_184325640_184325850_184325952_184326526_184326630_184326880_184326984_184327215_184327449_184327585_184327705_184327829_184328003_184328630_184328757_184328908_184328991_184331265_184331365_184331471_184331607_184331727_184331810_184331945_184332087_184334726
H1_mix_00064446	chr3	+	5337	32	NIC	ENSG00000114867.22	novel	5484	33	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	120	junction_1	497.412543361589	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCACTGCCTTTCTGCTT	42	True	NA	22	True	ATTAAA	-15	NA	184314618	184335352	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_184314675_184315762_184315857_184316131_184316219_184317320_184317498_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323404_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268_184325374_184325479_184325640_184325850_184325952_184326526_184326630_184326880_184326984_184327215_184327449_184327585_184327705_184327829_184328003_184328630_184328757_184328908_184328991_184331265_184331365_184331471_184331607_184331727_184331810_184331945_184332087_184334726
H1_mix_00064450	chr3	+	3677	3	FSM	ENSG00000175182.15	ENST00000310585.4	3677	3	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	1	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACATCTGGTCATTGGAG	130	False	NA	25	True	ATTAAA	-29	NA	184340469	184346275	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184342249_184342743_184342861_184344494
H1_mix_00064451	chr3	+	841	2	FSM	ENSG00000163882.10	ENST00000412877.1	836	2	-5	0	-5	0	multi-exon	FALSE	canonical	3	15	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGATATTGACCCGGAGG	-33	True	NA	NA	False	NA	NA	NA	184361717	184363527	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184362147_184363115
H1_mix_00064452	chr3	+	791	5	FSM	ENSG00000163882.10	ENST00000452961.5	791	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	314.640270785543	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGACTGCCCCTCCCCTTT	-1	True	NA	16	True	ATTAAA	-11	NA	184363402	184368533	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184363575_184364965_184365050_184365132_184365227_184366716_184366801_184368176
H1_mix_00064459	chr3	+	835	9	FSM	ENSG00000156931.16	ENST00000422105.5	811	9	-24	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	90.0843354862542	199	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGTATCAACAATGATTG	-11	True	NA	NA	False	NA	NA	NA	184812170	184849141	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184812226_184824146_184824233_184824544_184824786_184826162_184826232_184832688_184832820_184834648_184834743_184838713_184838747_184839697_184839753_184849070
H1_mix_00064461	chr3	+	3259	17	NIC	ENSG00000163904.13	novel	738	7	NA	NA	-32	709	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	56.8747252740618	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCTAACCCTCTCCCT	-1	True	NA	42	True	AATAAA	-39	NA	185582463	185631114	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_185582818_185590113_185590170_185598411_185598546_185598991_185599025_185600764_185600856_185606329_185606499_185609246_185609351_185611650_185611746_185612606_185612659_185613344_185613409_185614563_185614741_185617479_185617612_185619298_185619503_185621825_185621906_185623997_185624083_185626297_185626394_185629781
H1_mix_00064463	chr3	+	3253	17	NIC	ENSG00000163904.13	novel	738	7	NA	NA	41	696	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	60.4550452815975	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATGCTGAAATGATTTC	10	False	NA	29	True	AATAAA	-26	NA	185582536	185631101	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_185582864_185590113_185590170_185598411_185598546_185598957_185599025_185600764_185600856_185606329_185606499_185609246_185609351_185611650_185611746_185612606_185612659_185613344_185613409_185614563_185614741_185617479_185617612_185619298_185619503_185621825_185621906_185623997_185624083_185626297_185626394_185629781
H1_mix_00064467	chr3	+	1841	11	NIC	ENSG00000156976.17	novel	1977	12	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	278	junction_10	630.181275507294	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTGCTTTTGGTCATTT	11	False	NA	27	True	AATAAA	-16	NA	186783589	186789894	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_186783640_186784431_186784478_186784563_186784697_186785882_186786052_186786163_186786274_186786501_186786646_186787126_186787265_186787494_186787585_186787802_186787883_186788309_186788421_186789124
H1_mix_00064468	chr3	+	1729	10	FSM	ENSG00000156976.17	ENST00000443963.5	1729	10	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_3	547.000710948147	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTTTGGTCATTTTAT	18	False	NA	30	True	AATAAA	-19	NA	186783596	186789897	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_186783640_186784428_186784478_186784563_186784697_186785882_186786052_186786163_186786274_186786501_186786646_186787126_186787265_186787494_186787585_186787802_186787883_186789124
H1_mix_00064470	chr3	+	3947	7	FSM	ENSG00000073849.16	ENST00000457772.6	3947	7	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	95.8171000743952	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTCTCTCTTCTTATT	-27	True	NA	27	True	AATAAA	-20	NA	186930525	187078553	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_186930835_186963784_186963927_187038741_187038874_187051248_187051347_187072848_187072948_187074158_187074334_187075561
H1_mix_00064471	chr3	+	4667	9	NIC	ENSG00000073849.16	novel	4510	10	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	105.092518763231	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTCTTTAAGCTGCTTC	-18	True	NA	15	True	AATAAA	-8	NA	186930534	187078541	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_186930835_186948854_186948939_186963784_186963927_187038741_187038874_187042653_187043311_187051248_187051347_187072848_187072948_187074158_187074334_187075561
H1_mix_00064472	chr3	+	3185	3	NNC	ENSG00000175077.6	novel	2214	2	NA	NA	-5746	1045	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	9	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTCCAGCCAGATCCTCA	NA	False	NA	NA	False	AATAAA	-38	NA	187191739	187202507	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_187191770_187197589_187197788_187199550
H1_mix_00064477	chr3	+	277	2	Intergenic	novelGene_995	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	51	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCCTGACAATTACCACAG	NA	False	NA	NA	False	NA	NA	NA	191666422	191672368	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_191666525_191672193
H1_mix_00064478	chr3	+	681	3	FSM	ENSG00000232353.5	ENST00000444729.1	672	3	-41	32	-41	-32	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAACTTAAAGTATAATAA	NA	False	NA	NA	False	NA	NA	NA	192029838	192036525	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_192029907_192032306_192032412_192036017
H1_mix_00064481	chr3	+	4087	30	FSM	ENSG00000198836.11	ENST00000392437.6	4087	30	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_5	115.486820492605	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGGACATTCAAGCAAAG	-3	True	NA	8	True	AATAAA	-16	NA	193593279	193695652	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_193593410_193614722_193615042_193615673_193615771_193617177_193617286_193617783_193617838_193618868_193618937_193631611_193631666_193635417_193635523_193637194_193637282_193637951_193638066_193642764_193642846_193642974_193643050_193643372_193643445_193643527_193643628_193643974_193644106_193645552_193645626_193645727_193645801_193647064_193647181_193648069_193648135_193648794_193648872_193654861_193655028_193657079_193657233_193658886_193658996_193659481_193659562_193662821_193662963_193664879_193664997_193666295_193666390_193667169_193667281_193692062_193692133_193694605
H1_mix_00064494	chr3	+	2720	3	FSM	ENSG00000176945.18	ENST00000445522.6	2842	3	92	30	92	-28	multi-exon	FALSE	canonical	1	2	junction_1	0.5	191	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCATTAAAATTCACTCAGT	3339	False	NA	NA	False	AGTAAA	-36	NA	195724318	195733523	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_195726573_195729647_195729740_195733149
H1_mix_00064506	chr3	+	4134	15	NNC	ENSG00000186001.14	novel	2258	19	NA	NA	2	-1541	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_14	45.5904572900774	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTGTATTTATTTCAT	-16	True	NA	NA	False	AATAAA	-24	NA	197791236	197857898	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_197791541_197814907_197815053_197817175_197817303_197820324_197820431_197826877_197827015_197829563_197829674_197830769_197830864_197832196_197832318_197835673_197835823_197839320_197839398_197847408_197847461_197847871_197848022_197852560_197852621_197854391_197854446_197855450
H1_mix_00064511	chr3	+	687	2	FSM	ENSG00000182899.17	ENST00000474640.1	687	2	0	0	0	0	multi-exon	FALSE	canonical	3	12560	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTTGCTACATGCTTAA	1373	False	NA	48	True	ATTAAA	-18	NA	197953562	197955851	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_197954148_197955749
H1_mix_00064515	chr3	-	215	4	FSM	ENSG00000224318.6	ENST00000451839.5	508	4	242	51	104	-51	multi-exon	FALSE	canonical	0	0	junction_3	2.62466929133727	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCATGATTCTGCCTCAG	NA	False	NA	NA	False	NA	NA	NA	196617	195808	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_195915_195995_196041_196455_196509_196606
H1_mix_00064517	chr3	-	488	4	FSM	ENSG00000113851.16	ENST00000498442.1	488	4	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_3	18.3726850393609	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACGGCCACCAAAAAAGACAT	NA	False	NA	NA	False	NA	NA	NA	3154192	3150987	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_3151046_3152455_3152588_3153423_3153489_3153959
H1_mix_00064518	chr3	-	653	4	FSM	ENSG00000113851.16	ENST00000482844.5	653	4	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_2	11.3431330181157	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGCACTCCAATTTTAG	6772	False	NA	NA	False	AATAAA	-13	NA	3172923	3154549	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_3154832_3156218_3156282_3167633_3167794_3172775
H1_mix_00064522	chr3	-	332	1	FSM	ENSG00000236152.1	ENST00000421291.1	307	1	28	-53	28	53	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCCCAAAATGGCAGATGA	NA	False	NA	NA	False	AATAAA	-3	NA	6773315	6772983	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_6773000_6773300
H1_mix_00064523	chr3	-	1553	2	FSM	ENSG00000227110.7	ENST00000656911.1	2207	2	0	654	0	-654	multi-exon	FALSE	canonical	3	10	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAAAATGTCATTCCCACC	5	True	NA	NA	False	ATTAAA	-10	NA	8501662	8497488	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_8498850_8501470
H1_mix_00064524	chr3	-	600	2	FSM	ENSG00000180914.11	ENST00000449615.1	600	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGCCGCAGTTGCTGTG	933	False	NA	NA	False	NA	NA	NA	8768677	8767911	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_8768330_8768495
H1_mix_00064525	chr3	-	451	2	FSM	ENSG00000180914.11	ENST00000474615.1	532	2	38	43	38	-43	multi-exon	FALSE	canonical	3	15	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGGATTTCTGGGGTGGCG	35	False	NA	NA	False	NA	NA	NA	8769575	8768485	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_8768592_8769230
H1_mix_00064528	chr3	-	8920	22	FSM	ENSG00000196220.17	ENST00000383836.8	8923	22	0	3	0	0	multi-exon	TRUE	canonical	2	7	junction_17	6.75150105087079	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATGCTCCAGTGGTTTT	-5	True	NA	0	True	AATAAA	-18	NA	9249646	8980593	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_8985933_8990511_8990840_8992905_8993056_8994342_8994524_9010307_9010388_9013307_9013536_9013736_9013843_9015596_9015732_9025260_9025339_9026934_9026996_9032649_9032753_9038062_9038091_9047390_9047476_9053026_9053225_9056232_9056335_9058250_9058473_9060230_9060360_9064395_9064582_9080024_9080088_9104679_9104843_9124724_9124918_9248884
H1_mix_00064529	chr3	-	483	2	FSM	ENSG00000254485.5	ENST00000466431.6	484	2	0	1	0	-1	multi-exon	FALSE	canonical	2	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAAATTCAGGATTGATCC	87	False	NA	NA	False	AATAAA	-18	NA	9362941	9349685	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9350067_9362839
H1_mix_00064530	chr3	-	9268	2	FSM	ENSG00000206573.10	ENST00000664877.1	943	2	-8325	0	-12	0	multi-exon	FALSE	canonical	3	72	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCACAGCACTTTAGTAG	2094	False	NA	NA	False	AATAAA	-16	NA	9396695	9385264	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9385924_9388086
H1_mix_00064531	chr3	-	1847	4	NNC	ENSG00000206573.10	novel	793	5	NA	NA	-207	0	intron_retention	FALSE	canonical	0	0	junction_3	34.4222150491349	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATTTTTTTTCTCTTGG	3	True	NA	-4	True	ATTAAA	-16	NA	9398786	9385794	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_9385924_9388086_9388128_9390289_9391827_9398646
H1_mix_00064533	chr3	-	1858	3	ISM	ENSG00000206573.10	ENST00000481221.7	1897	4	1904	-21	9	0	3prime_fragment	FALSE	canonical	3	49	junction_2	24.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAGCACATTTGGTTGAA	3219	False	NA	-9	True	ATTAAA	-15	NA	9395570	9388852	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_9390498_9391678_9391827_9395505
H1_mix_00064539	chr3	-	4900	4	FSM	ENSG00000156959.9	ENST00000287585.8	4900	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	22.0655588845805	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGCTGCCACTTCTCTG	-9	True	NA	-1	True	AATAAA	-21	NA	9553822	9498360	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9502312_9505966_9506204_9552273_9552848_9553684
H1_mix_00064541	chr3	-	1321	11	NIC	ENSG00000134072.11	novel	1453	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_9	14.0499110317468	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTAGCGCTGTCTCCCTC	-1	True	NA	NA	False	AATAAA	-16	NA	9769947	9757346	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_9757622_9757728_9757847_9759487_9759576_9759671_9759751_9760655_9760769_9761460_9761537_9761630_9761758_9762913_9763053_9763138_9763214_9767666_9767782_9769831
H1_mix_00064542	chr3	-	467	1	FSM	ENSG00000269886.1	ENST00000602768.1	336	1	-137	6	-137	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATAGCAATGGCTAATAT	NA	False	NA	NA	False	AATAAA	-45	NA	9813234	9812767	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9812800_9813200
H1_mix_00064545	chr3	-	3368	5	FSM	ENSG00000163704.12	ENST00000295984.7	3368	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	28.0568619057798	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGCTTCCCTCTGGCCA	15	True	NA	-34	True	AATAAA	-15	NA	9952374	9945541	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9945712_9946084_9948002_9948757_9948914_9949100_9950173_9952321
H1_mix_00064546	chr3	-	1382	9	Fusion	ENSG00000163704.12_ENSG00000125037.13	novel	1584	9	NA	NA	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	139.034842755332	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGCTTCCCTCTGGCCA	-11	True	NA	-34	True	AATAAA	-15	NA	9986838	9945541	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr3_-_9945852_9963959_9964198_9969718_9969802_9970581_9970662_9973627_9973710_9974383_9974489_9976956_9977051_9977388_9977447_9986506
H1_mix_00064548	chr3	-	854	3	FSM	ENSG00000186162.11	ENST00000424471.2	1136	3	18	264	9	-263	multi-exon	FALSE	canonical	3	10	junction_1	26	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGTTGGCCAAAGGAGAA	-19	True	NA	NA	False	GGGGCT	-12	NA	10026357	10017752	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_10018072_10023529_10023748_10026040
H1_mix_00064549	chr3	-	1363	10	FSM	ENSG00000157020.18	ENST00000337354.8	1363	10	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_9	407.26267799651	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCTGCGTTATCCTAA	6	True	NA	-22	True	AATAAA	-17	NA	10321082	10300930	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_10301375_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10319138_10319173_10321049
H1_mix_00064550	chr3	-	2837	6	FSM	ENSG00000157020.18	ENST00000479868.6	2374	6	-463	0	-463	0	multi-exon	FALSE	canonical	3	981	junction_5	42.780369329869	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCCTGCTGCGTTATCCT	6654	False	NA	-24	True	AATAAA	-15	NA	10314434	10300932	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_10301375_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578
H1_mix_00064551	chr3	-	1603	9	FSM	ENSG00000157020.18	ENST00000397117.5	1603	9	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_8	389.038478174075	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCATATTGCTTATAAT	27	True	NA	-41	True	ACTAAA	-2	NA	10321061	10300949	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_10301148_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10320508
H1_mix_00064558	chr3	-	1015	5	FSM	ENSG00000144560.16	ENST00000418000.5	792	5	-223	0	-179	0	multi-exon	FALSE	canonical	3	33	junction_4	47.6287728164394	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGTCCCGGGCCTCCT	923	False	NA	NA	False	NA	NA	NA	11719817	11559331	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_11559456_11564796_11565020_11601832_11602023_11702970_11703048_11719416
H1_mix_00064559	chr3	-	746	3	FSM	ENSG00000144559.11	ENST00000498127.5	746	3	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	5.5	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTTGTTACTTTGACC	NA	False	NA	-1	True	AATAAA	-24	NA	11810059	11790441	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_11790582_11807832_11807896_11809516
H1_mix_00064560	chr3	-	2737	3	FSM	ENSG00000144559.11	ENST00000486090.1	2768	3	37	-6	37	0	multi-exon	FALSE	canonical	0	0	junction_2	57	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTTGTTACTTTGACC	NA	False	NA	-1	True	AATAAA	-24	NA	11811522	11790441	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_11790582_11807832_11809683_11810775
H1_mix_00064561	chr3	-	2012	8	NIC	ENSG00000144559.11	novel	1326	8	NA	NA	-2	0	intron_retention	FALSE	canonical	1	1	junction_2	42.1779514893354	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTTGTTACTTTGACC	-29	True	NA	-1	True	AATAAA	-24	NA	11846883	11790441	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_11790582_11807832_11808584_11809516_11809683_11817191_11817338_11829713_11829865_11839221_11839315_11844028_11844212_11846501
H1_mix_00064562	chr3	-	1510	9	NIC	ENSG00000144559.11	novel	1326	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_7	49	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTTGTTACTTTGACC	-9	True	NA	-1	True	AATAAA	-24	NA	11846863	11790441	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_11790582_11807832_11807896_11809516_11809683_11817191_11817338_11829713_11829865_11839221_11839315_11844028_11844212_11844890_11845097_11846501
H1_mix_00064563	chr3	-	1402	10	NIC	ENSG00000144559.11	novel	2558	10	NA	NA	162	-5	combination_of_known_junctions	FALSE	canonical	3	8	junction_8	57.1916854873931	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGACAGAACAGTGTTTG	237	False	NA	-12	True	AATAAA	-13	NA	11846617	11790452	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_11790582_11807832_11807896_11809516_11809683_11817191_11817338_11829713_11829865_11833002_11833152_11839221_11839315_11844028_11844212_11844890_11845097_11846501
H1_mix_00064566	chr3	-	1518	8	FSM	ENSG00000132155.14	ENST00000688326.1	1594	8	76	0	76	0	multi-exon	FALSE	canonical	1	2	junction_4	210.563093457829	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATAAATAAAATGGTCTT	5100	False	NA	NA	False	NA	NA	NA	12604213	12586846	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_12587638_12590797_12590975_12591707_12591793_12599112_12599226_12599690_12599809_12600151_12600280_12600387_12600416_12604135
H1_mix_00064569	chr3	-	1279	1	FSM	ENSG00000213943.3	ENST00000396959.2	1279	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	185	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCCAGCAGAAGCAGGGT	NA	False	NA	NA	False	NA	NA	NA	12788671	12787392	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_12787400_12788700
H1_mix_00064570	chr3	-	1269	1	FSM	ENSG00000272263.1	ENST00000606447.1	510	1	-723	-36	-723	36	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCTTTAAGTGCCAACCT	8106	False	NA	42	True	NA	NA	NA	12833451	12832182	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_12832200_12833500
H1_mix_00064571	chr3	-	620	4	FSM	ENSG00000144713.13	ENST00000435983.5	620	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	6928.99272782287	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTGGCATCTTCCTTCC	12	True	NA	-29	True	AATAAA	-12	NA	12841545	12836049	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_12836224_12839348_12839531_12840141_12840354_12841493
H1_mix_00064572	chr3	-	5464	2	NNC	ENSG00000144711.16	novel	3744	13	NA	NA	64792	7429	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAATCAGAACAAA	NA	False	NA	NA	False	NA	NA	NA	12902668	12889613	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_12889630_12897220
H1_mix_00064573	chr3	-	3075	12	ISM	ENSG00000144711.16	ENST00000273221.8	5279	14	-61	11129	-61	0	5prime_fragment	FALSE	canonical	3	65	junction_11	12.8210828438653	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGCTTGGCCTAGAAC	-20	True	NA	NA	False	NA	NA	NA	12967729	12908348	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_12908526_12909272_12909435_12911628_12911729_12913427_12913554_12915103_12915134_12915593_12915734_12920429_12920597_12922119_12922243_12924580_12924743_12935447_12936698_12941570_12941866_12967386
H1_mix_00064574	chr3	-	3136	20	FSM	ENSG00000132182.12	ENST00000420141.2	3134	20	0	-2	0	0	multi-exon	FALSE	non_canonical	3	209	junction_11	19.2492040343407	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAATTAGCTGGGCATG	23	True	NA	NA	False	AATATA	-37	NA	13420309	13351660	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_13351981_13352079_13352185_13353553_13353661_13353914_13354108_13358221_13358396_13360269_13360492_13365945_13366092_13371833_13372033_13373717_13373874_13375503_13375642_13376290_13376432_13377455_13377563_13378911_13378981_13379562_13379722_13386274_13386408_13388302_13388454_13391210_13391308_13397356_13397489_13399724_13399862_13420059
H1_mix_00064576	chr3	-	773	3	FSM	ENSG00000144596.13	ENST00000422481.5	4116	3	52	3291	52	410	multi-exon	FALSE	canonical	3	32	junction_1	7	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCCTGGCCTGAGCCTAC	NA	False	NA	NA	False	NA	NA	NA	14525931	14523982	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_14524539_14525436_14525573_14525850
H1_mix_00064577	chr3	-	3796	2	FSM	ENSG00000225733.7	ENST00000665738.1	3754	2	-29	-13	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAATTGCTGTTAGCCACC	891	False	NA	-20	True	AATAAA	-14	NA	14947538	14942783	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_14946155_14947113
H1_mix_00064578	chr3	-	823	2	FSM	ENSG00000131368.8	ENST00000496484.1	823	2	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACATCCATGACATATT	NA	False	NA	NA	False	AATACA	-22	NA	15049967	15042459	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_15043023_15049707
H1_mix_00064582	chr3	-	239	1	FSM	ENSG00000226427.1	ENST00000456186.1	273	1	63	-29	63	29	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTGACTGTACAGTTTG	NA	False	NA	NA	False	NA	NA	NA	15375582	15375343	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_15375300_15375600
H1_mix_00064583	chr3	-	2433	7	NIC	ENSG00000206562.12	novel	2618	6	NA	NA	0	-267	combination_of_known_junctions	FALSE	canonical	3	39	junction_2	78.5799309973962	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGTAGCACGTAAAGAGAT	3	True	NA	53	True	AAGAAA	-12	NA	15427540	15410026	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_15411438_15414020_15414163_15415497_15415584_15415771_15415943_15424954_15425090_15426286_15426636_15427401
H1_mix_00064586	chr3	-	626	4	FSM	ENSG00000206562.12	ENST00000453819.5	615	4	0	-11	0	11	multi-exon	FALSE	canonical	3	77	junction_1	68.2853490061293	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTTTCCCATGGCACAAA	3743	False	NA	-26	True	AATAAA	-29	NA	15425035	15413657	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_15413946_15415497_15415584_15415771_15415943_15424954
H1_mix_00064587	chr3	-	883	5	FSM	ENSG00000206561.14	ENST00000680240.1	1682	5	799	0	799	0	multi-exon	FALSE	canonical	2	2	junction_4	3.16227766016838	239	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCGCCCCTGACCACCGA	NA	False	NA	NA	False	NA	NA	NA	15458069	15451241	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_15451714_15453828_15453932_15455898_15456020_15456459_15456580_15458002
H1_mix_00064588	chr3	-	1787	16	ISM	ENSG00000131373.15	ENST00000321169.10	2009	17	23	2659	0	0	5prime_fragment	FALSE	canonical	3	291	junction_11	11.9264412127005	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATACAGTTGCTAAGCA	41	False	NA	NA	False	NA	NA	NA	15601546	15563357	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_15563545_15564550_15564659_15567843_15568003_15568431_15568587_15571667_15571770_15573158_15573243_15574976_15575083_15579909_15580046_15582876_15582990_15585247_15585343_15586524_15586603_15589539_15589613_15591599_15591681_15596383_15596425_15601089_15601195_15601382
H1_mix_00064589	chr3	-	1637	14	FSM	ENSG00000131373.15	ENST00000422591.5	1637	14	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	82.2920186370522	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATACAGTTGCTAAGCA	-3	True	NA	NA	False	NA	NA	NA	15601569	15563357	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_15563545_15564550_15564659_15567843_15568003_15568431_15568587_15571667_15571770_15573158_15573243_15574976_15575083_15579909_15580046_15582876_15582990_15589539_15589613_15591599_15591681_15596383_15596425_15601089_15601195_15601382
H1_mix_00064590	chr3	-	6771	29	NIC	ENSG00000206560.12	novel	4408	29	NA	NA	-40	97	intron_retention	FALSE	canonical	3	31	junction_28	52.5070452026999	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAGCAAAGTTGTTTTA	2	True	NA	NA	False	AATAAA	-9	NA	15859811	15667138	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_15670557_15675897_15675990_15676973_15677057_15677479_15677563_15678208_15678355_15679300_15679385_15679475_15679564_15685225_15685446_15686001_15686120_15686221_15686310_15690018_15690221_15694738_15694814_15695187_15695215_15696133_15696246_15707923_15708065_15709667_15709737_15711210_15711275_15712139_15712223_15713526_15713642_15714577_15714657_15720914_15721128_15724381_15724525_15735409_15735498_15737032_15737234_15751749_15751821_15766233_15766313_15795222_15795307_15814239_15814310_15859376
H1_mix_00064594	chr3	-	1464	2	FSM	ENSG00000229271.2	ENST00000693687.1	1001	2	-337	-126	-337	126	multi-exon	FALSE	canonical	3	13	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCACCTTCACTCAACTGG	37	False	NA	40	True	NA	NA	NA	16697856	16647626	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_16648613_16697378
H1_mix_00064601	chr3	-	1052	1	FSM	ENSG00000213383.2	ENST00000393779.2	870	1	35	-217	35	217	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGGAAGTCATTTGTG	NA	False	NA	NA	False	NA	NA	NA	17872563	17871511	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_17871500_17872600
H1_mix_00064603	chr3	-	7727	1	Genic_Genomic	ENSG00000129810.15	novel	NA	NA	NA	NA	4089	1141	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATCAAATGCTTAGAAGAG	NA	False	NA	NA	False	AGTAAA	-29	NA	20167178	20159451	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr3_-_20159500_20167200
H1_mix_00064604	chr3	-	1582	9	FSM	ENSG00000129810.15	ENST00000419233.6	1582	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	86.1763272308585	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCCTGTTATGGCCCTG	8	True	NA	NA	False	AATAAA	-44	NA	20186191	20160592	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_20161227_20170723_20170816_20171042_20171233_20175004_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20186058
H1_mix_00064606	chr3	-	1213	9	FSM	ENSG00000129810.15	ENST00000425061.5	1213	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	82.8989407350902	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATGGAGGGGTGTTGAC	113	False	NA	NA	False	AATAGA	-23	NA	20186127	20161008	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_20161227_20170723_20170816_20171042_20171233_20175004_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20185947
H1_mix_00064608	chr3	-	202	1	FSM	ENSG00000231395.1	ENST00000434170.1	518	1	14	302	14	-302	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGGATGTAGGTGTTTAG	NA	False	NA	NA	False	AAAACA	-14	NA	23879484	23879282	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_23879300_23879500
H1_mix_00064609	chr3	-	1749	5	NIC	ENSG00000197885.11	novel	1605	5	NA	NA	1	-75	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	40.2305853797829	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAGCTACTTAGTGGTTT	-14	True	NA	95	True	TTTAAA	-9	NA	23916968	23892171	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_23893334_23900803_23901050_23910810_23910922_23911328_23911451_23916860
H1_mix_00064610	chr3	-	6377	11	FSM	ENSG00000151090.20	ENST00000356447.9	6433	11	56	0	4	0	multi-exon	FALSE	canonical	1	2	junction_9	7.01498396291823	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTTTCCTGTCTCTTTC	2	True	NA	-3	True	GATAAA	-43	NA	24494747	24118213	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_24123126_24127498_24127758_24133315_24133463_24143500_24143707_24146674_24146823_24152389_24152491_24190073_24190335_24228937_24229002_24297225_24297372_24337299_24337372_24494686
H1_mix_00064616	chr3	-	3407	23	FSM	ENSG00000033867.17	ENST00000437266.5	3407	23	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	39.3660507342713	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTGAACCAAGAGGCATTA	4	True	NA	NA	False	AAGAAA	-32	NA	27484420	27376763	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_27376846_27383152_27383251_27385891_27386024_27389930_27390105_27391739_27391809_27394517_27394770_27394953_27395116_27397683_27397798_27398191_27398354_27400763_27400870_27403138_27403385_27404829_27404964_27411641_27411749_27418485_27418633_27420699_27420788_27421621_27421780_27424036_27424153_27433915_27434105_27436387_27436549_27437387_27437527_27448650_27448798_27452416_27452499_27484078
H1_mix_00064617	chr3	-	3287	7	NNC	ENSG00000163508.13	novel	3264	6	NA	NA	0	10431	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	104.848568050414	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAGAGAAATGCTTCAGG	0	True	NA	NA	False	NA	NA	NA	27722323	27705517	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_27705544_27715955_27717809_27718586_27718649_27718734_27718894_27719359_27719482_27720170_27720326_27721413
H1_mix_00064618	chr3	-	2649	6	FSM	ENSG00000163508.13	ENST00000461503.2	2080	6	-3	-566	-3	6	multi-exon	FALSE	canonical	2	11	junction_5	110.107947033809	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTCTTCTGTGCTGTTGG	-6	True	NA	-6	True	AATAAA	-29	NA	27722714	27715942	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_27717809_27718586_27718649_27718734_27718894_27719359_27719482_27720170_27720326_27722429
H1_mix_00064624	chr3	-	2479	14	NNC	ENSG00000144635.9	novel	2485	13	NA	NA	0	9439	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	105.183243878953	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAAGTGCTCTTTTTCTGTT	-8	True	NA	NA	False	NA	NA	NA	32570825	32516534	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_32516567_32525978_32526909_32528445_32528602_32529539_32529661_32530283_32530329_32530460_32530521_32532985_32533098_32534510_32534647_32537010_32537105_32541036_32541207_32544875_32545107_32545848_32545966_32570345_32570420_32570624
H1_mix_00064625	chr3	-	2470	14	NNC	ENSG00000144635.9	novel	2485	13	NA	NA	0	9439	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	105.183243878953	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAAGTGCTCTTTTTCTGTT	-8	True	NA	NA	False	NA	NA	NA	32570825	32516534	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_32516565_32525985_32526909_32528445_32528602_32529539_32529661_32530283_32530329_32530460_32530521_32532985_32533098_32534510_32534647_32537010_32537105_32541036_32541207_32544875_32545107_32545848_32545966_32570345_32570420_32570624
H1_mix_00064626	chr3	-	2417	17	NNC	ENSG00000170266.16	novel	2512	16	NA	NA	0	3086	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	173.658327884815	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGGATGTGGTGGTGC	307	False	NA	NA	False	NA	NA	NA	33096835	32993522	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_32993550_32996730_32997345_33014055_33014311_33016708_33016841_33018447_33018562_33021565_33021656_33024250_33024326_33046119_33046233_33051757_33051799_33051882_33052005_33053490_33053550_33058088_33058270_33065462_33065558_33068229_33068291_33068819_33068971_33072543_33072714_33096718
H1_mix_00064627	chr3	-	2436	17	NNC	ENSG00000170266.16	novel	2523	16	NA	NA	0	3086	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	139.616830557781	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGGATGTGGTGGTGC	-4	True	NA	NA	False	NA	NA	NA	33097146	32993522	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_32993550_32996730_32997345_33014055_33014311_33016708_33016841_33018447_33018562_33021565_33021656_33024250_33024326_33046119_33046233_33051757_33051799_33051882_33052005_33053490_33053550_33058088_33058270_33065462_33065558_33068229_33068291_33068819_33068971_33072543_33072714_33097010
H1_mix_00064631	chr3	-	4724	16	NNC	ENSG00000153560.12	novel	4175	16	NA	NA	-14	27	intron_retention	TRUE	canonical	3	26	junction_4	94.1480158521086	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTACTGTCACTTCGTGT	-9	True	NA	27	True	TTTAAA	-11	NA	33440601	33388308	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_33390369_33392562_33392615_33393311_33393455_33396161_33396281_33396444_33396879_33397044_33397136_33400188_33400283_33400961_33401017_33402800_33402905_33409235_33409347_33409448_33409602_33411580_33411688_33412721_33412828_33416757_33416835_33425589_33425742_33439735
H1_mix_00064634	chr3	-	536	3	FSM	ENSG00000153560.12	ENST00000464787.1	536	3	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	55.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAAATCTCAATTCA	NA	False	NA	NA	False	NA	NA	NA	33396302	33392362	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_33392615_33393311_33393455_33396161
H1_mix_00064635	chr3	-	4704	2	FSM	ENSG00000163539.18	ENST00000464961.1	6273	2	1615	-46	1615	46	multi-exon	FALSE	canonical	3	200	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCAAGTAACACGTGGT	8851	False	NA	45	True	AATATA	-9	NA	33503836	33496198	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_33498718_33501651
H1_mix_00064636	chr3	-	825	5	FSM	ENSG00000163539.18	ENST00000487553.5	825	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	81.8138130146738	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTCTGCATGTAACTTT	8157	False	NA	NA	False	NA	NA	NA	33535366	33498466	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_33498718_33501651_33501769_33516022_33516152_33516980_33517175_33535232
H1_mix_00064637	chr3	-	1505	4	FSM	ENSG00000163539.18	ENST00000494261.1	764	4	-577	-164	-577	164	multi-exon	FALSE	canonical	3	226	junction_1	17.6320415405843	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTTTTGGAGAACTTG	NA	False	NA	NA	False	NA	NA	NA	33545688	33535208	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_33535462_33538788_33538943_33543432_33543540_33544697
H1_mix_00064642	chr3	-	5476	9	ISM	ENSG00000168016.15	ENST00000646897.1	11776	26	97515	-4	3305	-2	3prime_fragment	FALSE	canonical	3	10	junction_7	6.64148891439262	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACATGCTGCCGTTTTATT	NA	False	NA	-4	True	TATAAA	-16	NA	36847346	36826821	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_36828376_36829563_36829663_36830872_36833920_36834761_36834908_36838371_36838505_36838612_36838717_36842621_36842711_36846247_36846405_36847199
H1_mix_00064643	chr3	-	2071	15	FSM	ENSG00000093167.18	ENST00000440230.5	1989	15	-19	-63	0	0	multi-exon	FALSE	canonical	3	36	junction_8	47.5446621394998	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGAATGAACACTTTGGA	-18	True	NA	27	True	AATGAA	-15	NA	37176327	37053686	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_37053962_37054410_37054516_37055085_37055166_37058789_37058911_37063741_37063792_37065809_37065943_37075023_37075117_37083635_37083807_37091466_37091539_37094791_37094909_37096615_37096661_37129062_37129150_37148893_37149039_37174538_37174606_37175817
H1_mix_00064644	chr3	-	311	1	FSM	ENSG00000224080.1	ENST00000416536.1	447	1	272	-136	272	136	mono-exon	FALSE	NA	NA	NA	NA	NA	236	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTCCCAGTCCTGTGACC	2146	False	NA	NA	False	NA	NA	NA	37143686	37143375	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_37143400_37143700
H1_mix_00064648	chr3	-	667	5	FSM	ENSG00000235257.10	ENST00000445429.5	532	5	0	-135	0	-114	multi-exon	FALSE	canonical	3	7	junction_2	2.8613807855649	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCACTTTGGGAGGCTAA	39	False	NA	NA	False	AATAAA	-38	NA	37861728	37805942	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_37806229_37808703_37808881_37821013_37821101_37834678_37834768_37861700
H1_mix_00064651	chr3	-	927	8	FSM	ENSG00000060971.19	ENST00000452171.5	927	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	60.8293028205375	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTGTGCAAGATAAAAGCAG	5213	False	NA	NA	False	NA	NA	NA	38131946	38122832	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_38123123_38125564_38125711_38125825_38125882_38126509_38126701_38127785_38127867_38129289_38129389_38131595_38131639_38131925
H1_mix_00064658	chr3	-	3098	5	NNC	ENSG00000144655.15	novel	3164	5	NA	NA	-99	2	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	23.6801604724292	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGGTATGTATTTGTGG	NA	False	NA	-2	True	AATAAA	-18	NA	39154661	39141852	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_39144045_39144136_39144452_39144996_39145257_39146477_39146723_39154575
H1_mix_00064660	chr3	-	2446	3	FSM	ENSG00000280739.4	ENST00000629723.2	2446	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	7.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTTTGATGTTGGGCTG	-6	True	NA	NA	False	ATTAAA	-15	NA	40309508	40289127	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_40291228_40301236_40301397_40309322
H1_mix_00064661	chr3	-	508	1	FSM	ENSG00000280739.4	ENST00000626073.1	415	1	0	-93	0	93	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGCTTGAGAATCACTGC	14	True	NA	NA	False	NA	NA	NA	40309488	40308980	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_40309000_40309500
H1_mix_00064663	chr3	-	1360	6	NIC	ENSG00000093183.14	novel	6340	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_4	77.7652878860485	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTCTTTGCACTTATG	24	True	NA	-22	True	AATAAA	-18	NA	42581942	42547968	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_42548658_42555929_42555996_42557577_42557697_42561116_42561297_42568864_42569074_42581845
H1_mix_00064665	chr3	-	602	5	FSM	ENSG00000280571.2	ENST00000431549.4	602	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1576.19706493192	276	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGGAAACGGTGGACGAG	37	False	42804534	NA	False	NA	NA	NA	42804518	42757176	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_42757215_42758124_42758352_42786027_42786163_42794156_42794276_42804435
H1_mix_00064668	chr3	-	570	4	FSM	ENSG00000160746.13	ENST00000444344.5	575	4	5	0	5	0	multi-exon	FALSE	canonical	3	7	junction_3	124.328418133408	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGGCAAAGTTGTATCCA	5640	False	NA	NA	False	NA	NA	NA	43621892	43598564	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_43598667_43600383_43600582_43605713_43605864_43621772
H1_mix_00064669	chr3	-	1884	1	FSM	ENSG00000280435.1	ENST00000624016.1	1670	1	6	-220	6	220	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCGTTGGTCGTAGGGGA	NA	False	NA	NA	False	NA	NA	NA	44117481	44115597	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_44115600_44117500
H1_mix_00064670	chr3	-	413	1	FSM	ENSG00000271937.1	ENST00000607510.1	612	1	189	10	189	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAACATTTCTTTTCCGG	NA	False	NA	-11	True	TATAAA	-12	NA	44338363	44337950	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_44338000_44338400
H1_mix_00064672	chr3	-	1913	4	NIC	ENSG00000178917.17	novel	1966	5	NA	NA	11	-44	intron_retention	FALSE	canonical	3	13	junction_1	3.09120616516523	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTTAGTAGGAAATTGGG	-5	True	NA	NA	False	NA	NA	NA	44510625	44499013	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_44500635_44502541_44502669_44502964_44503057_44510552
H1_mix_00064673	chr3	-	3872	1	FSM	ENSG00000178917.17	ENST00000463067.1	3535	1	-284	-53	-284	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTTCAATCAAAACTCATA	7226	False	NA	NA	False	TATAAA	-19	NA	44503394	44499522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_44499500_44503400
H1_mix_00064675	chr3	-	1476	7	NIC	ENSG00000163812.15	novel	3902	7	NA	NA	151	-111	combination_of_known_junctions	FALSE	canonical	3	17	junction_5	95.437006565704	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGTCTTCTCTTGGGA	141	False	NA	NA	False	NA	NA	NA	44976015	44917519	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_44918144_44929305_44929437_44933117_44933200_44933887_44933985_44945167_44945293_44959126_44959461_44975932
H1_mix_00064676	chr3	-	537	4	FSM	ENSG00000163812.15	ENST00000455235.5	537	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	113.620225116638	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTGAAGAAGATTGGACAA	-29	True	NA	NA	False	NA	NA	NA	44976185	44933137	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_44933200_44933887_44933985_44945167_44945293_44975932
H1_mix_00064677	chr3	-	759	5	FSM	ENSG00000163818.19	ENST00000480156.5	823	5	0	64	0	-64	multi-exon	FALSE	canonical	3	34	junction_4	7.48331477354788	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTTAACCTTCTAGAGAG	-31	True	NA	NA	False	NA	NA	NA	45842136	45832891	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_45833122_45834237_45834299_45835589_45835785_45837926_45838052_45841988
H1_mix_00064678	chr3	-	232	3	FSM	ENSG00000012223.13	ENST00000462667.1	523	3	0	291	0	-291	multi-exon	FALSE	canonical	2	4	junction_2	1	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAGCAGGGTAATGAGC	9254	False	NA	NA	False	GGGGCT	-38	NA	46455823	46454304	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_46454361_46455294_46455443_46455795
H1_mix_00064679	chr3	-	561	2	FSM	ENSG00000163827.14	ENST00000469912.1	561	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTGGGGCTACTCTGTT	10	True	NA	NA	False	NA	NA	NA	46566234	46551107	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_46551611_46566176
H1_mix_00064680	chr3	-	1022	2	ISM	ENSG00000178038.17	ENST00000498817.5	1065	5	2655	-185	2550	0	3prime_fragment	FALSE	canonical	3	21	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCTGAATTCCAGAGTC	NA	False	NA	-8	True	NA	NA	NA	46672043	46670598	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_46671065_46671487
H1_mix_00064682	chr3	-	764	7	FSM	ENSG00000160808.11	ENST00000292327.6	885	7	101	20	99	-15	multi-exon	FALSE	canonical	1	2	junction_5	0.957427107756338	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTCTTGCCGGCCTTCC	114	False	NA	-20	True	AATAAA	-1	NA	46863343	46857891	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_46858102_46858230_46858273_46858383_46858462_46859474_46859649_46860675_46860826_46860959_46860988_46863261
H1_mix_00064683	chr3	-	609	6	FSM	ENSG00000160808.11	ENST00000395869.5	1012	6	99	304	99	-255	multi-exon	FALSE	canonical	1	2	junction_4	1.01980390271856	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAGTGCTCACTTGACAT	114	False	NA	NA	False	NA	NA	NA	46863343	46858175	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_46858273_46858383_46858462_46859474_46859649_46860675_46860826_46860959_46860988_46863261
H1_mix_00064684	chr3	-	865	8	NNC	ENSG00000160799.12	novel	841	7	NA	NA	0	31229	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	221.952927533782	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGCTGTGAAGATTAAATG	2	True	NA	NA	False	NA	NA	NA	46976745	46890496	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_46890521_46921729_46922140_46922235_46922313_46923328_46923364_46923606_46923669_46925455_46925536_46940997_46941066_46976636
H1_mix_00064689	chr3	-	8612	21	NIC	ENSG00000181555.22	novel	8541	21	NA	NA	-2151	16	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	50.7982283155623	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATCAAGCATATTTGTGT	NA	False	NA	-4	True	AATAAA	-38	NA	47126687	47016411	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_47017255_47017637_47017740_47019759_47019841_47037665_47037778_47042560_47042701_47046486_47046622_47056820_47057491_47062162_47062347_47067069_47067119_47080800_47081084_47083719_47084383_47086194_47086315_47088112_47088248_47097954_47098082_47101457_47101556_47103345_47103424_47105996_47106121_47113875_47114005_47116622_47116755_47120181_47124549_47126647
H1_mix_00064692	chr3	-	3307	22	FSM	ENSG00000088727.14	ENST00000265529.7	3311	22	0	4	0	-2	multi-exon	FALSE	canonical	0	0	junction_7	29.9496175574369	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGTGCTCATCTGAGAAC	NA	False	NA	-15	True	GATAAA	-21	NA	47283451	47228398	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_47228703_47235512_47235618_47236033_47236150_47236442_47236620_47240800_47241016_47243050_47243246_47244790_47244925_47245420_47245512_47246196_47246253_47247372_47247478_47248017_47248087_47257482_47257561_47264285_47264351_47265729_47265878_47266975_47267069_47267179_47267264_47271236_47271462_47273551_47273659_47275324_47275491_47277281_47277380_47282494_47283120_47283400
H1_mix_00064693	chr3	-	3760	21	NNC	ENSG00000114650.21	novel	3748	20	NA	NA	0	37544	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	179.049958112254	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTGGGCTGGGCATGAG	-51	True	NA	NA	False	NA	NA	NA	47475937	47376136	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_47376165_47413710_47414100_47414179_47414387_47414571_47414653_47414826_47414994_47415097_47415181_47417121_47417208_47417303_47417824_47418133_47418250_47418320_47418523_47418654_47418844_47419327_47419705_47420553_47420773_47420930_47421030_47422441_47422537_47423932_47424046_47425484_47425612_47425996_47426170_47435007_47435138_47442871_47443092_47475798
H1_mix_00064694	chr3	-	3354	18	NNC	ENSG00000114650.21	novel	4254	23	NA	NA	0	37544	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	215.02086484418	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTGGGCTGGGCATGAG	-55	True	NA	NA	False	NA	NA	NA	47475941	47376136	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_47376165_47413710_47414100_47414179_47414387_47414571_47414653_47414826_47414994_47415097_47415181_47417121_47417208_47417303_47417827_47418133_47418250_47418320_47418523_47418654_47418844_47419327_47419705_47420553_47420773_47420930_47421030_47422441_47422537_47435007_47435138_47442871_47443092_47475798
H1_mix_00064699	chr3	-	2334	5	FSM	ENSG00000114646.10	ENST00000383738.6	4161	5	1828	-1	-95	0	multi-exon	FALSE	canonical	2	2	junction_1	12.2142335003061	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTTCTTAGTCTTTGT	235	False	NA	-5	True	AATAAA	-17	NA	47578964	47562237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_47562762_47569070_47569228_47572685_47572875_47576832_47577929_47578596
H1_mix_00064701	chr3	-	412	5	FSM	ENSG00000173473.11	ENST00000485833.1	412	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	674.045621601387	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTAGTTTTGCGTTGT	NA	False	NA	NA	False	NA	NA	NA	47746405	47729024	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_47729095_47736033_47736127_47738028_47738111_47745907_47745994_47746324
H1_mix_00064703	chr3	-	6337	20	NNC	ENSG00000047849.22	novel	5142	19	NA	NA	0	41455	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	131.504252482772	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTTACATTCCATAGACA	-14	True	NA	NA	False	NA	NA	NA	48089272	47809234	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_47809259_47850696_47853040_47853162_47853353_47855247_47855361_47857430_47857513_47867245_47867339_47869213_47869328_47870812_47871106_47871226_47871287_47871916_47872101_47875684_47875901_47877416_47877524_47914816_47914940_47915950_47917175_47918718_47918842_47921764_47921879_47928227_47928351_47977864_47977934_47998637_47998880_48088772
H1_mix_00064704	chr3	-	5561	17	NIC	ENSG00000047849.22	novel	5142	19	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	3	85	junction_4	146.127512809874	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGCAGGCTTCGTGCTTCT	38	True	NA	-22	True	AATAAA	-22	NA	48088828	47850696	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_47852939_47853162_47853353_47855247_47855361_47857430_47857513_47870812_47871106_47871226_47871287_47871916_47872101_47875684_47875901_47877416_47877524_47914816_47914940_47915950_47917175_47918718_47918842_47921764_47921879_47928227_47928351_47977864_47977934_47998637_47998880_48088772
H1_mix_00064705	chr3	-	5757	18	NIC	ENSG00000047849.22	novel	5142	19	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	3	60	junction_13	125.677678577914	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGCAGGCTTCGTGCTTCT	27	True	NA	-22	True	AATAAA	-22	NA	48088839	47850696	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_47853040_47853162_47853353_47855247_47855361_47857430_47857513_47867245_47867339_47869213_47869328_47870812_47871106_47871226_47871287_47871916_47872101_47875684_47875901_47877416_47877524_47914816_47914940_47915950_47917175_47921764_47921879_47928227_47928351_47977864_47977934_47998637_47998880_48088772
H1_mix_00064706	chr3	-	5811	18	NIC	ENSG00000047849.22	novel	5142	19	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	3	32	junction_16	132.546890573457	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGCAGGCTTCGTGCTTCT	27	True	NA	-22	True	AATAAA	-22	NA	48088839	47850696	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_47853040_47853162_47853353_47855247_47855361_47857430_47857513_47867245_47867339_47869213_47869328_47870812_47871106_47871226_47871287_47871916_47872101_47875684_47875901_47877416_47877524_47914816_47914940_47915950_47917175_47918718_47918842_47921764_47921879_47928227_47928351_47998637_47998880_48088772
H1_mix_00064707	chr3	-	5787	18	NIC	ENSG00000047849.22	novel	5142	19	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	3	18	junction_4	135.033354843961	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGCAGGCTTCGTGCTTCT	27	True	NA	-22	True	AATAAA	-22	NA	48088839	47850696	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_47853040_47853162_47853353_47855247_47855361_47857430_47857513_47869213_47869328_47870812_47871106_47871226_47871287_47871916_47872101_47875684_47875901_47877416_47877524_47914816_47914940_47915950_47917175_47918718_47918842_47921764_47921879_47928227_47928351_47977864_47977934_47998637_47998880_48088772
H1_mix_00064710	chr3	-	3643	14	FSM	ENSG00000164045.12	ENST00000351231.7	3663	14	0	20	0	-20	multi-exon	FALSE	canonical	3	58	junction_9	85.6249562691548	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTTGATGGATTTAAGGA	43	False	NA	8	True	AATAAA	-28	NA	48188356	48157165	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48159086_48159343_48159456_48164306_48164438_48165635_48165735_48165830_48165894_48167845_48167945_48174283_48174458_48177370_48177443_48177853_48177989_48182928_48183031_48183799_48183837_48184652_48184696_48186702_48186780_48187777
H1_mix_00064711	chr3	-	772	8	FSM	ENSG00000164045.12	ENST00000443342.5	777	8	0	5	0	-5	multi-exon	FALSE	canonical	3	123	junction_4	73.2284655258138	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTTGTTCTAGTGTGTC	433	False	NA	NA	False	NA	NA	NA	48187966	48177370	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48177443_48177853_48177989_48180720_48180841_48182928_48183028_48183799_48183837_48184652_48184696_48186702_48186780_48187777
H1_mix_00064712	chr3	-	730	6	FSM	ENSG00000164045.12	ENST00000437972.1	730	6	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_5	84.3075322850812	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGTGACTTCAATGTA	-3	True	NA	NA	False	NA	NA	NA	48188402	48182928	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48183031_48183799_48183837_48184652_48184696_48186702_48186780_48187777_48188216_48188369
H1_mix_00064713	chr3	-	1453	7	NIC	ENSG00000172113.10	novel	1353	7	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	71.7017356058338	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTATGCTGCCACATTT	-16	True	NA	-25	True	AATAAA	-19	NA	48301391	48293994	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_48294804_48295074_48295236_48296118_48296159_48296726_48296830_48298426_48298524_48300430_48300635_48301352
H1_mix_00064721	chr3	-	2079	7	NNC	ENSG00000164054.17	novel	2034	6	NA	NA	-19	77391	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	684.974796778847	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAAATCCTAGGTGACAT	644	False	NA	NA	False	NA	NA	NA	48504193	48390406	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_48390433_48467875_48469187_48469360_48469574_48469727_48469844_48479176_48479258_48501136_48501294_48504018
H1_mix_00064722	chr3	-	1736	5	NNC	ENSG00000164054.17	novel	1839	4	NA	NA	0	74811	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	800.395019662167	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTACCCCTTCCTCTGCCC	15	True	NA	NA	False	NA	NA	NA	48473079	48392986	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_48393013_48467875_48469187_48469360_48469574_48469727_48469844_48473009
H1_mix_00064723	chr3	-	7431	39	NNC	ENSG00000164050.13	novel	7178	38	NA	NA	-82	0	intron_retention	FALSE	canonical	3	83	junction_3	86.5223139041259	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGAGTCTGATGTGTGAG	9962	False	NA	-7	True	ATTAAA	-14	NA	48430168	48403855	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_48404591_48405723_48405799_48406567_48406741_48406822_48406899_48407026_48407092_48409328_48409477_48409570_48409732_48409904_48410078_48410295_48410381_48410454_48410559_48410867_48411037_48411862_48412010_48412237_48412305_48412441_48412621_48412741_48412960_48413068_48413170_48413669_48413819_48413894_48414072_48414798_48415042_48415175_48415348_48415582_48415760_48416030_48416168_48416345_48416452_48417910_48418063_48418190_48418364_48418448_48418543_48418916_48419040_48419243_48419367_48419576_48420258_48420664_48420774_48420847_48420957_48421227_48421385_48421673_48421807_48422104_48422206_48422330_48422460_48422764_48422948_48423504_48424618_48425280_48425334_48430007
H1_mix_00064724	chr3	-	2875	2	FSM	ENSG00000164050.13	ENST00000483753.1	424	2	-1936	-515	1403	-138	multi-exon	FALSE	canonical	3	418	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCCCTCAGCAGGGCTGG	NA	False	NA	NA	False	NA	NA	NA	48408001	48403993	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48404591_48405723
H1_mix_00064725	chr3	-	851	4	FSM	ENSG00000164050.13	ENST00000461261.1	851	4	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_3	38.9444048184931	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCAGGAGAGGCCCAGGGC	NA	False	NA	NA	False	NA	NA	NA	48412940	48411005	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48411037_48411862_48412305_48412441_48412621_48412741
H1_mix_00064727	chr3	-	1908	3	FSM	ENSG00000164054.17	ENST00000494854.5	1908	3	0	0	0	0	multi-exon	FALSE	canonical	3	1236	junction_2	376	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCCCCCTTTCTTCC	-9	True	NA	-29	True	AATAAA	-15	NA	48473103	48467875	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48469574_48469727_48469844_48473009
H1_mix_00064728	chr3	-	2250	6	FSM	ENSG00000164054.17	ENST00000442747.5	2250	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	742.038974717636	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCTGCCCCCTTTCTTC	-4	True	NA	-30	True	AATAAA	-14	NA	48504795	48467876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48469187_48469360_48469574_48469727_48469844_48479176_48479258_48501136_48501294_48504422
H1_mix_00064731	chr3	-	4555	73	ISM	ENSG00000114270.18	ENST00000328333.12	9276	118	12924	-1	2177	1	3prime_fragment	TRUE	canonical	2	8	junction_65	13.0002374147362	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTGTGACTGTTTGGGA	NA	False	NA	0	True	ATTAAA	-20	NA	48582343	48564071	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_48564423_48564782_48564981_48565108_48565202_48565409_48565497_48565635_48565669_48566266_48566316_48566509_48566564_48566659_48566738_48566906_48567024_48567127_48567191_48567573_48567637_48567709_48567764_48567837_48567892_48568089_48568171_48568498_48568535_48568783_48568856_48569374_48569447_48569591_48569649_48569724_48569761_48569879_48569916_48570133_48570179_48570274_48570335_48570464_48570501_48570638_48570711_48570860_48570969_48571100_48571161_48571242_48571279_48572000_48572046_48572126_48572172_48572379_48572422_48572502_48572539_48572670_48572740_48572861_48572943_48573020_48573057_48573173_48573237_48573315_48573349_48573512_48573558_48573689_48573726_48573854_48573891_48574261_48574307_48574487_48574551_48574676_48574722_48574796_48574866_48575063_48575127_48575206_48575243_48575338_48575540_48575625_48575749_48575866_48575903_48576248_48576297_48576399_48576436_48576521_48576558_48576675_48576772_48576883_48576920_48576991_48577028_48578320_48578366_48578452_48578516_48578918_48578955_48579196_48579278_48579368_48579405_48579479_48579516_48579587_48579669_48579784_48579815_48580030_48580058_48580299_48580345_48580580_48580653_48580881_48580927_48581121_48581158_48581259_48581341_48581447_48581484_48581572_48581633_48581705_48581760_48581910_48581944_48582322
H1_mix_00064732	chr3	-	955	6	FSM	ENSG00000010256.11	ENST00000471189.5	955	6	0	0	0	0	multi-exon	FALSE	canonical	3	3276	junction_1	119.792487243566	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTCATCCCTCTTTTGG	8222	False	NA	-14	True	AATAAA	-16	NA	48601425	48599001	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48599193_48599634_48599711_48600062_48600152_48600481_48600568_48600679_48601119_48601351
H1_mix_00064736	chr3	-	5177	19	NIC	ENSG00000225697.13	novel	2611	21	NA	NA	0	-36	intron_retention	FALSE	canonical	2	116	junction_4	37.6934106957243	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACAGGGAGGGAACTGGT	-6	True	NA	-64	True	NA	NA	NA	48635461	48625781	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_48626001_48626217_48626355_48626630_48626686_48626875_48628039_48628433_48628542_48628621_48628715_48629641_48629712_48629871_48629979_48630061_48630158_48630437_48630516_48630606_48630721_48630992_48631141_48631223_48631307_48631648_48631802_48631879_48632045_48632244_48632397_48632973_48633085_48633250_48633391_48633476
H1_mix_00064738	chr3	-	486	2	NIC	ENSG00000225697.13	novel	556	5	NA	NA	1	-32	intron_retention	FALSE	canonical	3	219	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCATGCCGATACCCGGG	3089	False	NA	NA	False	NA	NA	NA	48632366	48631680	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_48632045_48632244
H1_mix_00064740	chr3	-	813	5	FSM	ENSG00000213672.8	ENST00000470006.1	814	5	1	0	1	0	multi-exon	FALSE	canonical	3	177	junction_2	6.86931583201704	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGAGACCTCACCCCAGT	6171	False	NA	NA	False	NA	NA	NA	48679713	48674634	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48674748_48678563_48678737_48678876_48679184_48679376_48679458_48679574
H1_mix_00064741	chr3	-	1746	6	FSM	ENSG00000068745.15	ENST00000328631.10	1746	6	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_5	17.8728844901991	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTGCTCCTGTCATTCT	-16	True	NA	-3	True	AATACA	-20	NA	48717221	48688002	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48688774_48689537_48689714_48691306_48691483_48692953_48693180_48695089_48695422_48717156
H1_mix_00064744	chr3	-	1283	4	NIC	ENSG00000068745.15	novel	1260	4	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	94	junction_1	120.999540862306	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTGTAATTCTTTGG	22	True	NA	0	True	AATAAA	-21	NA	48717183	48693447	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_48694241_48694693_48694825_48695089_48695422_48717156
H1_mix_00064746	chr3	-	1124	2	FSM	ENSG00000068745.15	ENST00000417896.1	1124	2	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACTGGGTGCCTTTCTCT	-1	True	NA	NA	False	NA	NA	NA	48717206	48694344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48695419_48717156
H1_mix_00064750	chr3	-	1886	10	FSM	ENSG00000178149.17	ENST00000460505.5	1886	10	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_8	22.7861773130819	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTCTTGTCATGGGGA	9	True	NA	-13	True	AATAAA	-21	NA	49018566	49015487	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49015708_49015803_49015873_49015972_49016341_49016428_49016512_49016611_49016674_49016773_49016848_49017227_49017357_49017433_49017514_49017612_49017870_49018022
H1_mix_00064752	chr3	-	1923	12	FSM	ENSG00000178149.17	ENST00000313778.9	1968	12	50	-5	50	0	multi-exon	FALSE	canonical	0	0	junction_11	61.8976761603341	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTCTTGTCATGGGGA	9153	False	NA	-13	True	AATAAA	-21	NA	49021201	49015487	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49015708_49015803_49015873_49015972_49016087_49016157_49016341_49016428_49016512_49016611_49016674_49016773_49016848_49017227_49017357_49017433_49017514_49017612_49017870_49018022_49018319_49020845
H1_mix_00064756	chr3	-	2362	2	FSM	ENSG00000198218.11	ENST00000498392.1	2362	2	0	0	0	0	multi-exon	FALSE	canonical	3	433	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTCCTTTATGACAAGTG	NA	False	NA	-62	True	ATTAAA	-16	NA	49033830	49029930	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49030645_49032182
H1_mix_00064757	chr3	-	3084	11	FSM	ENSG00000198218.11	ENST00000357496.6	3083	11	0	-1	0	0	multi-exon	FALSE	canonical	3	38	junction_10	145.248924264519	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTCCTTTATGACAAGTG	-3	True	NA	-62	True	ATTAAA	-16	NA	49094062	49029930	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49030645_49032182_49032274_49032621_49032774_49033119_49033229_49044389_49044505_49046424_49046580_49047068_49047247_49056861_49057891_49076708_49077039_49092396_49092457_49093911
H1_mix_00064758	chr3	-	2995	11	FSM	ENSG00000198218.11	ENST00000424300.5	3009	11	14	0	14	0	multi-exon	FALSE	canonical	2	4	junction_10	152.171909365691	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTTGCTGGCTGACTCT	11	True	NA	20	True	NA	NA	NA	49093597	49030211	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49030645_49032182_49032274_49032621_49032774_49033119_49033229_49044389_49044505_49046424_49046580_49047068_49047247_49056861_49057891_49076708_49077039_49092396_49092457_49093254
H1_mix_00064759	chr3	-	527	2	FSM	ENSG00000198218.11	ENST00000437939.5	510	2	0	-17	0	17	multi-exon	FALSE	canonical	3	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCAGCCTGTTTAATGTAC	-12	True	NA	NA	False	NA	NA	NA	49094071	49076689	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49077039_49093893
H1_mix_00064761	chr3	-	859	8	FSM	ENSG00000172053.18	ENST00000453392.5	859	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	250.490620623624	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGTGTTATCTCTGCA	5503	False	NA	-3	True	AATAAA	-22	NA	49099595	49095931	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49096080_49098191_49098259_49098352_49098481_49098599_49098693_49098884_49098990_49099109_49099254_49099343_49099432_49099509
H1_mix_00064763	chr3	-	1149	9	FSM	ENSG00000172053.18	ENST00000482261.7	1149	9	0	0	0	0	multi-exon	FALSE	canonical	3	557	junction_8	55.0522479105077	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCAACTTTGGCTATGC	7005	False	NA	NA	False	NA	NA	NA	49104809	49101378	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49101442_49101619_49101706_49101827_49101900_49102204_49102266_49102418_49102473_49103344_49103707_49103862_49103973_49104323_49104472_49104616
H1_mix_00064766	chr3	-	4716	27	NIC	ENSG00000172046.20	novel	4719	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_20	70.564387903791	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTGTAATTTTTTTTG	-22	True	NA	-28	True	TATAAA	-18	NA	49120938	49108130	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_49108529_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112403_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115945_49116046_49116163_49116279_49116352_49116450_49116608_49116720_49116944_49117058_49117362_49117436_49117571_49117656_49117786_49117946_49118121_49119021_49119282_49120755
H1_mix_00064768	chr3	-	4743	27	NNC	ENSG00000172046.20	novel	4721	27	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_22	62.0521349803639	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTGTAATTTTTTTTG	-13	True	NA	-28	True	TATAAA	-18	NA	49120929	49108130	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_49108529_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112403_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115945_49116046_49116163_49116279_49116352_49116450_49116608_49116726_49116944_49117058_49117359_49117436_49117571_49117656_49117831_49117946_49118121_49119021_49119282_49120755
H1_mix_00064777	chr3	-	2973	2	FSM	ENSG00000188315.8	ENST00000479673.1	3330	2	363	-6	363	0	multi-exon	FALSE	canonical	3	24	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTCAGTTTCTTAGTT	3060	False	NA	-3	True	AATAAA	-18	NA	49274171	49268595	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49271446_49274048
H1_mix_00064778	chr3	-	3748	3	FSM	ENSG00000188315.8	ENST00000343010.8	3748	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	3.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTCAGTTTCTTAGTT	-1	True	NA	-3	True	AATAAA	-18	NA	49277232	49268595	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49271446_49274048_49274141_49276426
H1_mix_00064783	chr3	-	1364	1	FSM	ENSG00000233276.8	ENST00000419349.2	1135	1	-213	-16	-172	14	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCATTGTCATTTGGGA	9977	False	NA	0	True	AATAAA	-34	NA	49358525	49357161	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49357200_49358500
H1_mix_00064784	chr3	-	708	2	FSM	ENSG00000233276.8	ENST00000643797.1	708	2	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAGTGCCGGGTGTCAG	3	True	NA	-39	True	NA	NA	NA	49358325	49357200	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49357748_49358164
H1_mix_00064785	chr3	-	388	3	FSM	ENSG00000067560.14	ENST00000265538.3	388	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCCGTCGGTTCTCTCGT	9530	False	NA	NA	False	NA	NA	NA	49412998	49411944	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49412119_49412403_49412603_49412983
H1_mix_00064786	chr3	-	1825	8	FSM	ENSG00000145020.16	ENST00000637682.1	1823	8	0	-2	0	0	multi-exon	TRUE	canonical	3	8	junction_1	187.105557896922	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTAGCTTCATTGTTCT	5	True	NA	-7	True	ATTAAA	-19	NA	49422457	49416777	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49417719_49418970_49419152_49419259_49419406_49419709_49419789_49420210_49420343_49421491_49421573_49422103_49422272_49422360
H1_mix_00064787	chr3	-	3976	5	FSM	ENSG00000145020.16	ENST00000465925.6	3976	5	0	0	0	0	multi-exon	FALSE	canonical	3	495	junction_4	43.629118716747	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTAGCTTCATTGTTCT	-7	True	NA	-7	True	ATTAAA	-19	NA	49422469	49416777	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49417719_49417817_49417974_49418970_49421573_49422103_49422272_49422360
H1_mix_00064790	chr3	-	2677	7	FSM	ENSG00000145020.16	ENST00000636725.1	2677	7	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_6	176.341209653961	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTACTTGCCAGTCTCTA	8	True	NA	-20	True	ATTAAA	-6	NA	49422454	49416790	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419259_49420343_49421491_49421573_49422103_49422258_49422360
H1_mix_00064793	chr3	-	2862	7	FSM	ENSG00000145020.16	ENST00000637268.1	2855	7	0	-7	0	0	multi-exon	FALSE	canonical	3	11	junction_3	275.089934789011	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTACTTGCCAGTCTCTA	-7	True	NA	-20	True	ATTAAA	-6	NA	49422469	49416790	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49417719_49417817_49417974_49418166_49418229_49418970_49420343_49421491_49421573_49422103_49422258_49422360
H1_mix_00064796	chr3	-	2822	6	FSM	ENSG00000145020.16	ENST00000637457.1	2815	6	0	-7	0	0	multi-exon	FALSE	canonical	3	111	junction_5	187.801384446441	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTACTTGCCAGTCTCTA	6801	False	NA	-20	True	ATTAAA	-6	NA	49422491	49416790	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49417719_49417817_49417974_49418970_49420343_49421491_49421573_49422103_49422258_49422360
H1_mix_00064797	chr3	-	4546	3	FSM	ENSG00000145020.16	ENST00000473163.2	4544	3	0	-2	0	0	multi-exon	FALSE	canonical	3	531	junction_2	19.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACTGAATCCTGAAAAAAAA	-1	True	NA	-51	True	NA	NA	NA	49422463	49416821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49417719_49417817_49417974_49418970
H1_mix_00064802	chr3	-	3677	6	FSM	ENSG00000145020.16	ENST00000637914.1	3677	6	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_3	81.8950547957567	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTCTAGTGTGCTGCCC	-7	True	NA	NA	False	NA	NA	NA	49422469	49416968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419259_49421573_49422103_49422272_49422360
H1_mix_00064805	chr3	-	1613	9	FSM	ENSG00000145020.16	ENST00000636978.1	1613	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	175.606805107319	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACTCACTCTTCCACATT	8	True	NA	NA	False	NA	NA	NA	49422454	49416993	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49417358_49417614_49417719_49417817_49417974_49418970_49419406_49419709_49419789_49420210_49420343_49421491_49421573_49422103_49422272_49422360
H1_mix_00064811	chr3	-	2467	5	FSM	ENSG00000145029.14	ENST00000436744.2	1271	5	35	-1231	-3	1	multi-exon	FALSE	canonical	3	4	junction_3	13.3510299228187	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGCTGGCTGCCTGTGT	1	True	NA	-4	True	AATAAA	-16	NA	49429291	49422945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49424875_49424948_49425054_49425366_49425439_49426251_49426429_49429107
H1_mix_00064813	chr3	-	853	5	FSM	ENSG00000173531.16	ENST00000494809.1	859	5	6	0	1	0	multi-exon	FALSE	canonical	2	5	junction_3	4.27200187265877	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCCCCCAGGTTAGGAGT	2616	False	NA	NA	False	NA	NA	NA	49686851	49685481	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49685507_49685595_49685733_49685859_49685963_49686061_49686482_49686683
H1_mix_00064815	chr3	-	7166	2	FSM	ENSG00000176095.12	ENST00000495798.1	541	2	-3509	-3116	-3509	1	multi-exon	FALSE	canonical	3	201	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAGTCTGTCTTTGTGAAA	NA	False	NA	0	True	AATAAA	-17	NA	49731905	49724292	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49727656_49728102
H1_mix_00064818	chr3	-	3157	10	FSM	ENSG00000164076.17	ENST00000475665.5	3157	10	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_6	52.8667087011182	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCACCCTCTCGCCTTT	12	True	NA	-14	True	AATAAA	-19	NA	49869903	49857987	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49859882_49860170_49860259_49860470_49860550_49860715_49860853_49860942_49861301_49861438_49861578_49861790_49861866_49862044_49862177_49862293_49862403_49869757
H1_mix_00064824	chr3	-	1621	5	FSM	ENSG00000164077.15	ENST00000455683.7	1617	5	0	-4	0	4	multi-exon	FALSE	canonical	3	7	junction_3	29.3885606997008	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCAAGCTCTGTCACTT	-13	True	NA	-6	True	ATTAAA	-18	NA	49929889	49908868	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49909155_49909252_49909401_49910118_49910885_49913219_49913360_49929608
H1_mix_00064825	chr3	-	1666	4	NNC	ENSG00000114383.10	novel	1669	3	NA	NA	0	38356	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	352.746682794073	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGCTGCCGGGCGCAG	15	True	NA	NA	False	NA	NA	NA	50328195	50281670	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_50281696_50324908_50326187_50326356_50326478_50327953
H1_mix_00064829	chr3	-	891	2	FSM	ENSG00000214706.12	ENST00000462001.1	891	2	0	0	0	0	multi-exon	FALSE	canonical	3	707	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGCTGTTTCACAGCCTG	-13	True	NA	NA	False	NA	NA	NA	50292436	50290008	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50290680_50292216
H1_mix_00064830	chr3	-	1330	2	FSM	ENSG00000243477.6	ENST00000354862.4	1330	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTGACAGTTTATTTG	-4	True	NA	-4	True	AATAAA	-15	NA	50299416	50296401	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50297528_50299212
H1_mix_00064831	chr3	-	2150	4	FSM	ENSG00000068001.14	ENST00000395139.7	2136	4	0	-14	0	-5	multi-exon	FALSE	canonical	3	449	junction_3	75.021478406002	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTACCTGGGCTAAAGTG	8121	False	NA	-12	True	ATTAAA	-29	NA	50321713	50317794	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50318540_50318955_50319046_50319568_50320536_50321365
H1_mix_00064834	chr3	-	2229	8	FSM	ENSG00000114388.14	ENST00000461020.5	2229	8	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_7	63.7917530336174	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTATTGAGTGCTGTTTCT	-20	True	NA	-4	True	AATAAA	-20	NA	50350782	50347487	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50347674_50347758_50347902_50348123_50348242_50348316_50348411_50348526_50348783_50348873_50349011_50349385_50349829_50349930
H1_mix_00064840	chr3	-	2513	4	FSM	ENSG00000007402.12	ENST00000483620.1	2526	4	13	0	13	0	multi-exon	FALSE	canonical	3	54	junction_2	3.29983164553722	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGGTTTATTACAGAAGA	NA	False	NA	30	True	AAGAAA	-44	NA	50365769	50362854	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50364807_50364887_50365185_50365355_50365483_50365632
H1_mix_00064844	chr3	-	1540	15	NNC	ENSG00000114767.7	novel	1542	15	NA	NA	28	-1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_9	120.53062952238	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTTTCTTGTAGCTTCT	20	True	NA	-8	True	ATTAAA	-17	NA	51941876	51933429	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_51933600_51933707_51933782_51934471_51934552_51934630_51934777_51935196_51935260_51935341_51935477_51935591_51935693_51936256_51936350_51936430_51936583_51937191_51937319_51937544_51937587_51937668_51937737_51938094_51938205_51941408_51941492_51941780
H1_mix_00064845	chr3	-	2217	1	FSM	ENSG00000280422.1	ENST00000624646.1	2054	1	-228	65	-228	-65	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTGCAGAGTTCATGCT	8863	False	NA	-68	True	NA	NA	NA	51954130	51951913	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_51951900_51954100
H1_mix_00064846	chr3	-	2286	11	FSM	ENSG00000090097.22	ENST00000497390.5	2434	11	152	-4	152	0	multi-exon	FALSE	canonical	3	147	junction_1	22.2371311099251	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGAAATACTGGTGTTG	7915	False	NA	-10	True	AATAAA	-20	NA	51961484	51957453	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_51958350_51958789_51958960_51959046_51959100_51959228_51959293_51959366_51959412_51959576_51959652_51959894_51960024_51960188_51960321_51960525_51960899_51961009_51961034_51961159
H1_mix_00064847	chr3	-	2553	12	FSM	ENSG00000090097.22	ENST00000498822.5	2547	12	0	-6	0	0	multi-exon	FALSE	canonical	3	24	junction_11	51.9833094638069	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGAAATACTGGTGTTG	6143	False	NA	-10	True	AATAAA	-20	NA	51963256	51957453	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_51958350_51958789_51958960_51959046_51959100_51959228_51959293_51959366_51959412_51959576_51959652_51959894_51960024_51960188_51960321_51960525_51960899_51961009_51961034_51961159_51961305_51962809
H1_mix_00064848	chr3	-	2002	14	FSM	ENSG00000090097.22	ENST00000484633.5	2009	14	11	-4	4	0	multi-exon	FALSE	canonical	3	10	junction_6	78.4047305661331	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGAAATACTGGTGTTG	7	True	NA	-10	True	AATAAA	-20	NA	51968399	51957453	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_51958350_51958789_51958960_51959046_51959100_51959228_51959293_51959366_51959412_51959576_51959652_51960188_51960321_51960525_51960643_51960865_51960899_51961009_51961034_51961159_51961305_51962809_51962893_51967325_51967435_51968343
H1_mix_00064850	chr3	-	2053	5	FSM	ENSG00000114779.20	ENST00000483233.5	2056	5	0	3	0	2	multi-exon	FALSE	canonical	1	1	junction_4	10.4253297309965	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCGGCTCCTGCTTCTAA	NA	False	NA	-10	True	AATAAA	-17	NA	51983409	51968512	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_51969606_51969942_51970185_51971459_51971699_51973964_51974235_51983200
H1_mix_00064851	chr3	-	840	4	FSM	ENSG00000162244.12	ENST00000648640.1	910	4	-6	76	0	30	multi-exon	FALSE	canonical	2	40	junction_3	3677.22760906758	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTTGGTTGCTCCATCT	547	False	NA	-3	True	AATAAA	-43	NA	51995863	51993597	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_51994127_51995041_51995107_51995424_51995470_51995662
H1_mix_00064855	chr3	-	2399	1	FSM	ENSG00000242797.3	ENST00000624537.1	697	1	-1609	-93	-1609	93	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATCCCAGCACTTTGGA	9268	False	NA	85	True	NA	NA	NA	52290885	52288486	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52288500_52290900
H1_mix_00064856	chr3	-	1052	5	FSM	ENSG00000163930.10	ENST00000471532.5	1052	5	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_2	17.9304210770411	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAGCAAACAGGGCCCC	2485	False	NA	NA	False	NA	NA	NA	52408047	52405810	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52405913_52406252_52406908_52407173_52407317_52407398_52407461_52407957
H1_mix_00064860	chr3	-	7619	29	NIC	ENSG00000163939.18	novel	4980	29	NA	NA	-9	4	combination_of_known_junctions	FALSE	canonical	3	32	junction_28	60.2639919395471	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTCTGTTAAAGTGGTG	-9	True	NA	4	True	AATAAA	-39	NA	52685891	52545347	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_52548236_52550420_52550638_52550746_52550818_52561766_52561969_52563282_52563494_52564049_52564234_52576540_52576699_52579053_52579200_52586424_52586689_52587352_52587511_52589069_52589256_52603520_52603733_52609312_52609956_52615350_52615457_52617261_52617539_52627272_52627371_52628893_52629036_52634601_52634816_52641953_52642046_52643247_52643344_52644703_52644790_52648343_52648443_52651741_52651811_52658198_52658316_52662132_52662277_52668497_52668646_52678499_52678598_52679573_52679724_52685748
H1_mix_00064868	chr3	-	1627	10	FSM	ENSG00000016864.19	ENST00000394783.7	1621	10	0	-6	0	0	multi-exon	FALSE	canonical	2	4	junction_9	77.4789497497287	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTCTTTTTTTATTCCA	4078	False	NA	-2	True	AATAAA	-20	NA	52703619	52694485	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52695036_52695189_52695303_52695420_52695588_52695927_52696041_52696233_52696319_52696541_52696660_52697720_52697935_52700261_52700361_52700444_52700497_52703503
H1_mix_00064872	chr3	-	402	2	FSM	ENSG00000055955.17	ENST00000485894.1	402	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	322	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGCATCAGCACCTCC	6854	False	NA	NA	False	NA	NA	NA	52823817	52820990	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52821131_52823555
H1_mix_00064873	chr3	-	7011	11	NNC	ENSG00000248592.7	novel	1405	10	NA	NA	-37	0	intron_retention	FALSE	non_canonical	0	0	junction_3	76.2957403791326	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAAGGTGTTGGTTGGTC	-25	True	NA	-10	True	AATAAA	-26	NA	52897599	52833120	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_52833431_52833616_52833750_52834939_52837987_52838006_52840611_52842810_52842961_52843720_52843799_52844828_52844942_52849791_52849914_52852602_52852699_52855395_52855445_52897290
H1_mix_00064875	chr3	-	8945	21	Fusion	ENSG00000163935.14_ENSG00000289519.1	novel	4553	21	NA	NA	26894	-8	multi-exon	FALSE	canonical	2	5	junction_20	20.9215200212604	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAAGCATTTTGTCGCA	NA	False	NA	-8	True	ATTAAA	-10	NA	53018375	52899211	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr3_-_52905277_52906112_52906242_52907068_52907315_52907554_52907734_52911002_52911179_52912537_52912648_52913477_52913618_52916149_52916215_52918483_52918527_52920536_52920651_52921704_52921832_52926030_52926114_52928190_52928342_52930328_52930431_52930940_52931036_52932061_52932309_52934812_52934902_52943352_52943594_52954316_52954412_52969100_52969259_53018085
H1_mix_00064876	chr3	-	3591	22	NIC	ENSG00000163935.14	novel	4553	21	NA	NA	18	-1042	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	25.164222524014	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTATGTGGCTCTAGGGT	25	True	NA	-5	True	ATTAAA	-18	NA	53046034	52904613	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_52905277_52906112_52906242_52907068_52907315_52907554_52907734_52911002_52911179_52912537_52912648_52913477_52913618_52916149_52916215_52918483_52918527_52920536_52920651_52921704_52921832_52926030_52926114_52928190_52928342_52930328_52930431_52930940_52931036_52932061_52932309_52934812_52934902_52943352_52943594_52954316_52954412_52969100_52969259_53043135_53043255_53045815
H1_mix_00064877	chr3	-	3600	21	NIC	ENSG00000163935.14	novel	4553	21	NA	NA	9	-868	combination_of_known_junctions	FALSE	canonical	3	14	junction_20	19.6567418459927	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAGGGGGGGAAACTGT	9	True	NA	NA	False	CATAAA	-20	NA	53046632	52904439	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_52905277_52906112_52906242_52907068_52907315_52907554_52907734_52911002_52911179_52912537_52912648_52913477_52913618_52916149_52916215_52918483_52918527_52920536_52920651_52921704_52921832_52926030_52926114_52928190_52928342_52930328_52930431_52930940_52931036_52932061_52932309_52934812_52934902_52943352_52943594_52954316_52954412_52969100_52969259_53046459
H1_mix_00064878	chr3	-	1800	12	FSM	ENSG00000163933.10	ENST00000394738.7	1800	12	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_10	99.435098647184	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCATTTTATAGTAATCA	-14	True	NA	-27	True	TTTAAA	-13	NA	53130453	53091664	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_53092071_53092368_53092619_53099380_53099487_53103952_53104098_53105672_53105804_53106818_53106870_53111829_53111909_53119883_53120022_53121698_53121801_53122373_53122564_53125908_53125995_53130337
H1_mix_00064880	chr3	-	1972	8	FSM	ENSG00000163931.17	ENST00000461139.5	1972	8	0	0	0	0	multi-exon	FALSE	canonical	3	2959	junction_5	310.7313295818	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGAATTGGCCCTGAA	9875	False	NA	-25	True	AATATA	-10	NA	53232299	53225656	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_53225932_53226755_53226879_53228055_53228150_53228275_53228360_53229006_53229138_53229279_53229437_53230456_53230622_53231356
H1_mix_00064881	chr3	-	610	4	FSM	ENSG00000163931.17	ENST00000487660.1	610	4	0	0	0	0	multi-exon	FALSE	canonical	3	2955	junction_2	230.770207975139	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGACTCACAATTTCAAAC	NA	False	NA	NA	False	NA	NA	NA	53242199	53234851	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_53235175_53240250_53240349_53241131_53241246_53242124
H1_mix_00064882	chr3	-	565	2	FSM	ENSG00000163931.17	ENST00000483706.1	565	2	0	0	0	0	multi-exon	FALSE	canonical	3	3273	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAACGCTTTAACTCAAA	NA	False	NA	NA	False	AATACA	-44	NA	53256052	53241894	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_53242243_53255835
H1_mix_00064883	chr3	-	1961	12	NIC	ENSG00000113812.14	novel	3579	13	NA	NA	52	-19	combination_of_known_splicesites	FALSE	canonical	2	2	junction_10	37.4587376294689	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATAAATAGGAACTTTCT	3	True	NA	-33	True	TATAAA	-32	NA	53882100	53868520	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_53868863_53869981_53870146_53871231_53871497_53872383_53872525_53873031_53873128_53874210_53874365_53875947_53876081_53876619_53876714_53877213_53877388_53877646_53877752_53879938_53880110_53881978
H1_mix_00064885	chr3	-	4405	6	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	-17141	3442	at_least_one_novel_splicesite	TRUE	canonical	3	40	junction_1	3735.51894119144	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGAGTGGTTTTTATTTT	NA	False	NA	-5	True	ATTAAA	-19	NA	54656998	54628679	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_54629473_54631643_54632808_54633558_54633741_54634460_54634566_54637690_54639820_54656966
H1_mix_00064886	chr3	-	5130	6	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	-17146	3433	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	3741.16208683879	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAATACCTAGAGTGGT	NA	False	NA	-14	True	ATTAAA	-10	NA	54657003	54628688	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_54630202_54631643_54632808_54633558_54633741_54634460_54634566_54637690_54639820_54656966
H1_mix_00064887	chr3	-	5165	6	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	-17146	3433	at_least_one_novel_splicesite	TRUE	canonical	2	2	junction_1	3648.2566028173	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAATACCTAGAGTGGT	NA	False	NA	-14	True	ATTAAA	-10	NA	54657003	54628688	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_54630542_54631643_54632503_54633558_54633741_54634460_54634566_54637690_54639820_54656966
H1_mix_00064888	chr3	-	704	4	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	16	-201	at_least_one_novel_splicesite	FALSE	canonical	3	371	junction_3	3713.10893995854	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTCCCAAACACATGGA	NA	False	NA	-9	True	AAAACA	-10	NA	54639841	54632322	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_54632503_54633558_54633741_54634460_54634566_54639604
H1_mix_00064889	chr3	-	5257	3	ISM	ENSG00000114251.15	ENST00000497027.5	1299	5	1878	-4204	1405	-74	3prime_fragment	FALSE	canonical	3	6	junction_1	2.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGAAATGAGATAAAGATTA	9565	False	NA	-75	True	NA	NA	NA	55479515	55465788	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_55470551_55474336_55474630_55479313
H1_mix_00064890	chr3	-	4165	9	NIC	ENSG00000187672.14	novel	6239	18	NA	NA	154477	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	5.97782360060917	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCATTCTATCTCTAATA	NA	False	NA	-5	True	AATAAA	-21	NA	56019033	55508307	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_55511277_55699377_55699513_55734770_55734919_55888388_55888550_55950424_55950561_55992056_55992251_56007180_56007322_56010448_56010590_56018893
H1_mix_00064891	chr3	-	7048	17	FSM	ENSG00000163946.14	ENST00000431842.6	7119	17	71	0	71	0	multi-exon	FALSE	canonical	3	13	junction_1	21.4636320318813	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGGAAAAGGGCACTTTT	9940	False	NA	NA	False	AAAACA	-45	NA	56664260	56620544	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_56623567_56624478_56624644_56624827_56625007_56627036_56627146_56627581_56627742_56628491_56628615_56633043_56633844_56638705_56638766_56639985_56640131_56641348_56641753_56646521_56647224_56648821_56648894_56648984_56649058_56660730_56660835_56660913_56661018_56662384_56662491_56663540
H1_mix_00064894	chr3	-	1726	6	NNC	ENSG00000168374.11	novel	1596	6	NA	NA	-11	0	intron_retention	FALSE	canonical	1	104	junction_4	709.498527130254	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTGTTCTTTTTGAG	NA	False	NA	NA	False	AATAAA	-17	NA	57597519	57571362	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_57572299_57575547_57575674_57577315_57577388_57583897_57583963_57584383_57584465_57597073
H1_mix_00064895	chr3	-	1360	4	FSM	ENSG00000168374.11	ENST00000489843.1	1360	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	845.229883259907	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAATTATTCCTAATAAAA	125	False	NA	NA	False	AATACA	-19	NA	57597334	57571397	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_57572299_57575547_57575674_57577315_57577388_57597073
H1_mix_00064897	chr3	-	1616	10	FSM	ENSG00000168291.13	ENST00000469364.5	1616	10	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_3	871.120351424915	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGGAATTTCTAACATG	13	True	NA	7	True	ATTAAA	-42	NA	58433820	58427650	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_58428180_58428472_58428615_58429707_58429942_58430127_58430239_58430656_58430943_58431592_58431629_58431730_58431794_58431876_58431985_58433630_58433685_58433767
H1_mix_00064900	chr3	-	586	4	FSM	ENSG00000168291.13	ENST00000469827.1	586	4	0	0	0	0	multi-exon	FALSE	canonical	3	2637	junction_3	150.147335048686	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTACAGGTCGCGCCACT	4	True	NA	NA	False	NA	NA	NA	58433829	58431431	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_58431794_58431876_58431985_58433630_58433685_58433767
H1_mix_00064901	chr3	-	438	3	FSM	ENSG00000168306.13	ENST00000466810.5	558	3	120	0	120	0	multi-exon	FALSE	canonical	2	4	junction_2	2	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGCAGCTGAACCATGTG	3683	False	NA	NA	False	NA	NA	NA	58533705	58531309	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_58531367_58531692_58531813_58533444
H1_mix_00064902	chr3	-	1646	11	ISM	ENSG00000163689.21	ENST00000482387.7	3291	17	4	124560	4	-5340	5prime_fragment	FALSE	canonical	2	8	junction_5	6.77938050267132	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTGGCATCTTTATTACA	-17	True	NA	NA	False	NA	NA	NA	59050021	58866567	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_58866689_58867816_58867937_58869327_58869491_58870172_58870310_58884544_58884710_58913707_58913865_58937647_58937763_59039556_59039630_59046228_59046323_59047164_59047255_59049610
H1_mix_00064903	chr3	-	733	2	Genic_Genomic	ENSG00000226360.5	novel	652	1	NA	NA	0	34013	multi-exon	FALSE	non_canonical	0	0	junction_1	0	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCAGAGAGCCCAGTTCA	27	False	NA	NA	False	AAAAAG	-2	NA	61743106	61708441	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr3_-_61708472_61742403
H1_mix_00064904	chr3	-	732	2	Genic_Genomic	ENSG00000226360.5	novel	652	1	NA	NA	0	34013	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCAGAGAGCCCAGTTCA	27	False	NA	NA	False	AAAAAG	-2	NA	61743106	61708441	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr3_-_61708472_61742404
H1_mix_00064905	chr3	-	273	1	FSM	ENSG00000237456.3	ENST00000462623.1	405	1	201	-69	201	69	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTTATTTTTCAACCAT	311	False	NA	NA	False	NA	NA	NA	62124407	62124134	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_62124100_62124400
H1_mix_00064906	chr3	-	2723	6	FSM	ENSG00000241472.7	ENST00000664758.1	2758	6	35	0	-2	0	multi-exon	FALSE	canonical	3	9	junction_1	18.6225669551756	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACATTAAACATAATGAAAA	11	False	NA	NA	False	NA	NA	NA	62318925	62261845	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_62264143_62292613_62292718_62294699_62294779_62317105_62317193_62317807_62317904_62318865
H1_mix_00064908	chr3	-	1809	8	FSM	ENSG00000163618.18	ENST00000613879.4	1804	8	0	-5	0	0	multi-exon	FALSE	canonical	0	0	junction_6	13.5300119914875	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATACGTTTGGGTCTGTCTT	1256	False	NA	NA	False	AATAAA	-20	NA	62474325	62398349	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_62399586_62403080_62403186_62438103_62438212_62445764_62445798_62465366_62465451_62466338_62466414_62467297_62467313_62474172
H1_mix_00064909	chr3	-	1633	4	NNC	ENSG00000241359.1	novel	558	5	NA	NA	-95570	1161	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_2	11.4406682011537	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCAATTTTTTATTCAC	NA	False	NA	NA	False	NA	NA	NA	63645621	63422434	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_63423766_63426685_63426807_63549977_63550052_63645514
H1_mix_00064911	chr3	-	2621	2	FSM	ENSG00000163636.11	ENST00000463139.5	2621	2	0	0	0	0	multi-exon	FALSE	canonical	3	1190	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCATTTATTTTTTTCTT	6147	False	NA	-20	True	AATAAA	-18	NA	64013288	64010554	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_64010765_64010877
H1_mix_00064912	chr3	-	1176	8	FSM	ENSG00000163636.11	ENST00000482510.5	1176	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	433.249327283767	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTATAAAATAAATACTGCAT	9	True	NA	-49	True	NA	NA	NA	64023458	64010583	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_64010765_64010877_64010956_64013438_64013608_64018598_64018708_64018817_64019038_64019295_64019442_64022317_64022524_64023391
H1_mix_00064913	chr3	-	4730	1	FSM	ENSG00000163637.13	ENST00000638436.1	4446	1	1732	-2016	1732	145	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGTTTCTAAGCCTCAGCA	14	False	NA	NA	False	TTTAAA	-3	NA	64098454	64093724	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_64093700_64098500
H1_mix_00064914	chr3	-	6890	2	ISM	ENSG00000163637.13	ENST00000640303.1	3704	6	16230	-4632	7354	-18	3prime_fragment	FALSE	canonical	3	14	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAATTTGAATAAAAGA	NA	False	NA	-49	True	AATACA	-14	NA	64147682	64093888	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_64099926_64146829
H1_mix_00064915	chr3	-	387	2	FSM	ENSG00000163637.13	ENST00000639113.1	587	2	174	26	174	-26	multi-exon	FALSE	canonical	3	10	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCATGGATTCAGGGGA	7437	False	NA	NA	False	NA	NA	NA	64163264	64159939	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_64160078_64163015
H1_mix_00064917	chr3	-	5946	22	NNC	ENSG00000151276.24	novel	6225	22	NA	NA	0	-199	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	51.6577345801199	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTTCATAGCTTTATTT	321	False	NA	NA	False	TATAAA	-24	NA	65597886	65354429	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_65357133_65361198_65361338_65363464_65363609_65364664_65364726_65364852_65364947_65375744_65375913_65379260_65379555_65381876_65382070_65383531_65383624_65391141_65391359_65401438_65401471_65429519_65430141_65430698_65430882_65437154_65437248_65439878_65440013_65442791_65442850_65448021_65448058_65453257_65453341_65470282_65470485_65478591_65478799_65493511_65493632_65597814
H1_mix_00064924	chr3	-	1138	10	FSM	ENSG00000172340.15	ENST00000492795.1	1512	10	-3	377	0	-377	multi-exon	FALSE	canonical	1	2	junction_1	171.523744891862	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACGTTCTTGAAGCTTGG	-8	True	NA	NA	False	AATACA	-10	NA	67654610	67408982	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_67409035_67495797_67495941_67498133_67498296_67508806_67508904_67518246_67518337_67520481_67520635_67528131_67528223_67529086_67529187_67609454_67609597_67654502
H1_mix_00064925	chr3	-	2080	6	NNC	ENSG00000163377.16	novel	2229	6	NA	NA	18	-8	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	14.388884598884	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGCATACATGTTTTTG	41	False	NA	-11	True	AGTAAA	-15	NA	68932529	68731773	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_68733154_68739115_68739200_68752862_68753019_68880729_68880846_68885174_68885311_68932321
H1_mix_00064926	chr3	-	1388	15	FSM	ENSG00000144744.17	ENST00000465627.5	1388	15	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_11	289.003389571253	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACCTTCCCTTGAAGACA	-7	True	NA	57	True	AATGAA	-19	NA	69080377	69055297	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_69055526_69055850_69055906_69055999_69056064_69056182_69056284_69056611_69056694_69056778_69056816_69057255_69057310_69061813_69061928_69062076_69062180_69062981_69063138_69063438_69063504_69071534_69071618_69075429_69075511_69077797_69077919_69080333
H1_mix_00064931	chr3	-	5963	24	NIC	ENSG00000114541.15	novel	6283	23	NA	NA	-44	-609	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	4.13797937959286	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACCTTGTCTCAAGAAAAA	88	False	NA	NA	False	NA	NA	NA	69542627	69169390	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_69171982_69176523_69176657_69180898_69181711_69182597_69182718_69187769_69187918_69189895_69189953_69193647_69193874_69195021_69195142_69195230_69195365_69196254_69196397_69196899_69197039_69198697_69198775_69216262_69216350_69218321_69218380_69221857_69221924_69224606_69224691_69249225_69249249_69250042_69250100_69287751_69287837_69302342_69302436_69311262_69311358_69313451_69313518_69432633_69432762_69542205
H1_mix_00064932	chr3	-	452	7	FSM	ENSG00000114541.15	ENST00000483668.5	566	7	113	1	113	-1	multi-exon	FALSE	canonical	3	19	junction_6	3.57848509226398	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGGATCAAAGACGTTTC	63	False	NA	NA	False	NA	NA	NA	69250099	69198697	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_69198775_69216262_69216350_69218321_69218380_69221857_69221924_69224606_69224691_69249225_69249249_69250042
H1_mix_00064933	chr3	-	845	6	FSM	ENSG00000114541.15	ENST00000459638.5	846	6	0	1	0	-1	multi-exon	FALSE	canonical	3	15	junction_2	3.05941170815567	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTGCCCCGTTTGTCAT	9	True	NA	NA	False	NA	NA	NA	69542583	69287751	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_69287837_69302342_69302436_69311262_69311358_69313451_69313518_69432633_69432762_69542205
H1_mix_00064934	chr3	-	5385	3	FSM	ENSG00000114861.24	ENST00000648113.1	785	3	0	-4600	0	87	multi-exon	FALSE	canonical	1	1	junction_2	2.5	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATCTTAAAGCTTTCATG	8110	False	NA	NA	False	ATTAAA	-2	NA	70971167	70954605	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_70959392_70965889_70966057_70970735
H1_mix_00064935	chr3	-	2154	3	FSM	ENSG00000114861.24	ENST00000648155.1	2325	3	171	0	171	0	multi-exon	FALSE	canonical	3	5	junction_1	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCAAGACCCTGTCTCAA	2246	False	NA	NA	False	NA	NA	NA	70978944	70976085	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_70977043_70977642_70977723_70977827
H1_mix_00064936	chr3	-	728	7	FSM	ENSG00000114861.24	ENST00000318779.7	843	7	10	105	10	-101	multi-exon	FALSE	canonical	0	0	junction_2	5.93483127158829	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCAGGTCCCCTTGTGG	30	False	NA	NA	False	NA	NA	NA	71583929	71197986	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_71198069_71198201_71198393_71299819_71299881_71359149_71359245_71493425_71493556_71581548_71581698_71583909
H1_mix_00064938	chr3	-	2764	8	FSM	ENSG00000163412.13	ENST00000295612.7	2764	8	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_7	81.0588095905985	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAATATTTCTAGTTTCTG	-2	True	NA	-6	True	AATAAA	-19	NA	71753624	71682726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_71684729_71690009_71690166_71693874_71693942_71696459_71696521_71699613_71699709_71710411_71710485_71728475_71728624_71753462
H1_mix_00064939	chr3	-	1827	3	FSM	ENSG00000163421.9	ENST00000353065.7	1549	3	-215	-63	-215	62	multi-exon	FALSE	canonical	2	4	junction_1	8	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACCCCAAGGTTGGTAAAA	21	False	NA	61	True	NA	NA	NA	71785421	71771592	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_71772829_71781466_71781593_71784956
H1_mix_00064940	chr3	-	1024	3	FSM	ENSG00000241163.9	ENST00000668168.1	1426	3	297	105	285	-96	multi-exon	FALSE	canonical	1	2	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAGAGGAATAGTGTGGTA	NA	False	NA	NA	False	NA	NA	NA	72059945	72035857	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_72036521_72055860_72055963_72059686
H1_mix_00064942	chr3	-	1518	2	NNC	ENSG00000144736.14	novel	4024	3	NA	NA	28662	324	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATGTGTTGGCGTATGT	NA	False	NA	-2	True	AATAAA	-19	NA	72766928	72749634	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_72750837_72766612
H1_mix_00064943	chr3	-	1045	1	FSM	ENSG00000240135.1	ENST00000490962.1	1366	1	213	108	213	-108	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCAAATAATTTATGAAATG	NA	False	NA	NA	False	NA	NA	NA	72877889	72876844	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_72876800_72877900
H1_mix_00064945	chr3	-	1035	1	FSM	ENSG00000179799.9	ENST00000478335.2	1035	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCCTACATCTGCAAATCC	NA	False	NA	NA	False	AAGAAA	-16	NA	75357501	75356466	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_75356500_75357500
H1_mix_00064946	chr3	-	3009	7	FSM	ENSG00000244026.7	ENST00000484945.6	2406	7	0	-603	0	595	multi-exon	FALSE	canonical	3	7	junction_3	92.7930792438507	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTCATGTAAACTGCAGA	NA	False	NA	NA	False	NA	NA	NA	75435125	75420956	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_75423062_75426449_75426600_75427426_75427693_75427774_75427909_75430831_75430915_75432807_75432871_75434917
H1_mix_00064947	chr3	-	2152	5	FSM	ENSG00000244026.7	ENST00000497543.5	2152	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	80.5543294925853	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACAGATGATCTGTGGCT	17	False	NA	-34	True	AATAAA	-31	NA	75435048	75421551	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_75423062_75426449_75426622_75430831_75430915_75432807_75432871_75434724
H1_mix_00064948	chr3	-	4444	12	NIC	ENSG00000169855.21	novel	6927	31	NA	NA	-13866	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_9	55.9715098720355	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTTTCTTGTGTTGAT	NA	False	NA	-18	True	ATTAAA	-17	NA	78648446	78597238	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_78598928_78600112_78600310_78606732_78607042_78614647_78614801_78617634_78618042_78627320_78627570_78631160_78631306_78633934_78634043_78635772_78635944_78639743_78639899_78646147_78646191_78647628
H1_mix_00064951	chr3	-	548	3	FSM	ENSG00000114480.13	ENST00000484687.1	863	3	0	315	0	-315	multi-exon	FALSE	canonical	3	54	junction_2	9.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGGGTTAGTGCAGACGT	NA	False	NA	NA	False	TTTAAA	-2	NA	81577943	81534981	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_81535326_81536910_81537096_81577924
H1_mix_00064955	chr3	-	3065	14	FSM	ENSG00000184500.16	ENST00000647936.1	3053	14	0	-12	0	0	multi-exon	FALSE	canonical	0	0	junction_1	40.1640128596992	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATAATTTTAAAATGCAT	-11	True	NA	16	True	AATAAA	-40	NA	93973888	93873123	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_93874406_93879162_93879315_93884727_93884897_93886335_93886504_93892932_93893123_93896575_93896692_93898447_93898570_93900803_93900930_93905783_93905916_93906020_93906144_93910618_93910706_93924239_93924265_93927249_93927408_93973673
H1_mix_00064958	chr3	-	1870	9	NIC	ENSG00000170854.18	novel	4854	10	NA	NA	13	-64	intron_retention	FALSE	canonical	3	27	junction_3	28.4492420812928	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGGAAAGCCTGGTATT	11	True	NA	NA	False	NA	NA	NA	97972418	97945240	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_97945888_97947360_97947450_97949843_97950013_97950785_97950889_97954391_97954496_97959050_97959180_97961588_97961709_97967161_97967633_97972380
H1_mix_00064960	chr3	-	1395	6	FSM	ENSG00000080822.17	ENST00000507874.5	1380	6	0	-15	0	15	multi-exon	FALSE	canonical	2	2	junction_1	386.661609162327	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTGACTGCAAACGAATT	4	True	NA	NA	False	NA	NA	NA	98522922	98500824	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_98501521_98517051_98517190_98518884_98518996_98521132_98521443_98521652_98521719_98522848
H1_mix_00064961	chr3	-	1610	2	FSM	ENSG00000080822.17	ENST00000506927.1	520	2	185	-1275	0	101	multi-exon	FALSE	canonical	3	895	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGGCTGTCGTTACATCC	5882	False	NA	92	True	NA	NA	NA	98517160	98515378	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_98516880_98517051
H1_mix_00064962	chr3	-	642	4	FSM	ENSG00000080822.17	ENST00000511081.5	642	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	380.527119781086	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCTATTTTATTTATAC	-14	True	NA	43	True	NA	NA	NA	98522905	98516543	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_98516880_98517051_98517190_98518884_98518996_98522848
H1_mix_00064963	chr3	-	999	5	FSM	ENSG00000080822.17	ENST00000513287.5	999	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	365.017122886037	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCCTGCTTTACAATTG	7263	False	NA	-66	True	AATGAA	-26	NA	98522754	98516652	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_98516880_98517051_98517190_98518884_98518996_98521132_98521443_98522541
H1_mix_00064970	chr3	-	931	3	FSM	ENSG00000080819.9	ENST00000515041.1	1030	3	0	99	0	-99	multi-exon	FALSE	canonical	3	99	junction_2	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTACGGAAAGTACTGTCG	0	True	NA	NA	False	NA	NA	NA	98593610	98590617	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_98590743_98591011_98591156_98592948
H1_mix_00064971	chr3	-	4425	3	FSM	ENSG00000057019.16	ENST00000496736.1	516	3	-47	-3862	-47	-33	multi-exon	FALSE	canonical	3	364	junction_2	61.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAATGCCAGATTCTTC	9519	False	NA	-32	True	AATAAA	-33	NA	98802018	98795973	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_98799842_98800578_98800717_98801599
H1_mix_00064973	chr3	-	543	3	Genic_Genomic	ENSG00000242299.1	novel	459	1	NA	NA	0	70468	multi-exon	FALSE	non_canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATGGAATAAATAAGTGAA	40	False	NA	NA	False	NA	NA	NA	101576947	101506020	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr3_-_101506039_101561334_101561362_101576449
H1_mix_00064974	chr3	-	1086	2	Antisense	novelGene_ENSG00000289629.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCTTTGGCACTGGAGGA	NA	False	NA	NA	False	AAGAAA	-36	NA	101596816	101594658	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr3_-_101594805_101595876
H1_mix_00064975	chr3	-	6555	19	NIC	ENSG00000114423.23	novel	6749	19	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_9	16.9939168491712	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGAGTTGGTACTTTATT	3	True	NA	NA	False	TATAAA	-17	NA	105868994	105655460	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_105659230_105670232_105670353_105678430_105678572_105681478_105681611_105681723_105681819_105685319_105685467_105693493_105693589_105702093_105702460_105703987_105704174_105720046_105720251_105734008_105734141_105737170_105737259_105740493_105740632_105745916_105746039_105751461_105751619_105776395_105776543_105853413_105853665_105867409_105867592_105868911
H1_mix_00064979	chr3	-	509	1	FSM	ENSG00000241634.1	ENST00000489433.1	509	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTATATACCAAAGGAATATA	7196	False	NA	NA	False	NA	NA	NA	108543875	108543366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_108543400_108543900
H1_mix_00064981	chr3	-	3375	21	NNC	ENSG00000163507.15	novel	4066	21	NA	NA	0	564	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_19	14.2421908427039	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCATTGTGTTAAACTAT	-7	True	NA	6	True	AATAAA	-20	NA	108589438	108550551	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_108551320_108552233_108552374_108553647_108553731_108554375_108554490_108557217_108557415_108559756_108559868_108559953_108560029_108560648_108560842_108563125_108563245_108565354_108565455_108566496_108566639_108568154_108568315_108569388_108569608_108576270_108576347_108579280_108579427_108579565_108579689_108581414_108581512_108582107_108582203_108582976_108583081_108585064_108585213_108589273
H1_mix_00064985	chr3	-	280	1	FSM	ENSG00000240787.1	ENST00000462510.1	417	1	93	44	93	-44	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTACCAGGGCAAATGCTTT	9080	False	NA	NA	False	NA	NA	NA	111570961	111570681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_111570700_111571000
H1_mix_00064986	chr3	-	844	1	FSM	ENSG00000244144.1	ENST00000487626.1	519	1	-1	-324	-1	324	mono-exon	FALSE	NA	NA	NA	NA	NA	261	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCACCTTGGGAGTTCT	NA	False	NA	NA	False	NA	NA	NA	112185999	112185155	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_112185200_112186000
H1_mix_00064990	chr3	-	1145	1	FSM	ENSG00000272844.1	ENST00000609673.1	707	1	-178	-260	-178	260	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATGATACAAAAATTAATGAA	NA	False	NA	NA	False	AATAAA	-2	NA	112991331	112990186	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_112990200_112991300
H1_mix_00064991	chr3	-	2179	8	FSM	ENSG00000163608.15	ENST00000472637.5	2179	8	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_6	49.0447525745827	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTTAATTTTATTTATTT	10	True	NA	-13	True	ATTAAA	-23	NA	113019654	113004916	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_113006005_113008170_113008431_113010642_113010705_113011044_113011407_113012733_113012812_113013271_113013404_113013948_113014033_113019541
H1_mix_00064995	chr3	-	6499	5	FSM	ENSG00000121579.14	ENST00000481432.5	958	5	-19	-5522	-19	390	multi-exon	FALSE	canonical	3	100	junction_3	588.956439390894	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCTCTAACATTGGCT	8379	False	NA	NA	False	NA	NA	NA	113746268	113716067	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_113721938_113722905_113722973_113723421_113723542_113723980_113724096_113745941
H1_mix_00064997	chr3	-	248	1	FSM	ENSG00000200372.1	ENST00000363502.1	116	1	69	-201	69	201	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACAGAGGGAGACTCCGTC	NA	False	NA	NA	False	NA	NA	NA	116965158	116964910	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_116964900_116965200
H1_mix_00065006	chr3	-	426	1	FSM	ENSG00000272662.1	ENST00000609598.1	504	1	-78	156	-78	-156	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTCACTCCCTTTAGTT	NA	False	NA	NA	False	NA	NA	NA	119498259	119497833	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_119497800_119498300
H1_mix_00065007	chr3	-	345	4	NNC	ENSG00000138495.7	novel	430	4	NA	NA	0	30804	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1329.27106173104	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTAACTCATTAAATACAG	106	False	NA	NA	False	AAAAAG	-9	NA	119677294	119623708	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_119623743_119669534_119669666_119675144_119675234_119677203
H1_mix_00065008	chr3	-	347	4	NNC	ENSG00000138495.7	novel	430	4	NA	NA	0	30804	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1329.27106173104	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTAACTCATTAAATACAG	106	False	NA	NA	False	AAAAAG	-9	NA	119677294	119623708	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_119623742_119669531_119669666_119675144_119675234_119677203
H1_mix_00065009	chr3	-	1328	4	FSM	ENSG00000121577.14	ENST00000493094.6	1822	4	447	47	443	-44	multi-exon	FALSE	canonical	1	1	junction_2	0.471404520791032	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCCGTGGCACCAAGTAAG	786	False	NA	NA	False	NA	NA	NA	119660142	119642102	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_119642562_119648118_119648669_119654504_119654614_119659932
H1_mix_00065012	chr3	-	546	2	FSM	ENSG00000082701.17	ENST00000679201.1	546	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTTTTTGAACTTTGT	NA	False	NA	NA	False	AAGAAA	-18	NA	119876508	119826405	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_119826856_119876412
H1_mix_00065014	chr3	-	4510	10	FSM	ENSG00000175697.11	ENST00000464295.6	4573	10	63	0	63	0	multi-exon	FALSE	canonical	0	0	junction_7	3.2659863237109	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGCTCTAAATGTATCAT	235	False	NA	NA	False	ATTAAA	-19	NA	120285159	120165477	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_120168385_120173311_120173471_120181124_120181362_120185298_120185395_120186657_120186784_120192938_120193050_120193294_120193425_120243639_120243777_120244002_120244479_120285028
H1_mix_00065015	chr3	-	6793	13	NIC	ENSG00000051341.15	novel	8757	30	NA	NA	-9775	29	combination_of_known_splicesites	FALSE	canonical	2	10	junction_8	24.7683714083551	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAGTTGGTCTAAGAGTG	NA	False	NA	17	True	AATGAA	-41	NA	121491371	121431401	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_121432418_121432917_121433034_121436121_121436276_121439991_121440117_121449314_121449427_121467518_121467641_121468304_121468432_121471989_121472165_121476539_121476734_121481571_121481813_121483385_121483583_121485040_121485185_121487301
H1_mix_00065018	chr3	-	545	5	FSM	ENSG00000160124.9	ENST00000479899.5	545	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	409.434594898868	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGGCGGGCTTTCTAGGA	9	True	NA	55	True	NA	NA	NA	122383227	122359787	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_122359920_122362967_122363028_122368175_122368323_122371674_122371801_122383147
H1_mix_00065019	chr3	-	4589	1	FSM	ENSG00000196981.4	ENST00000330689.6	4217	1	-378	6	-378	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCACCATGGCTCATGCC	NA	False	NA	NA	False	AATAAA	-11	NA	122416440	122411851	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_122411900_122416400
H1_mix_00065020	chr3	-	3060	11	FSM	ENSG00000114030.13	ENST00000470904.5	3060	11	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_10	113.908910977149	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATGACTGCAATCTGTA	753	False	NA	-25	True	AATAAA	-27	NA	122459885	122425679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_122427173_122427537_122427717_122433660_122433789_122437169_122437296_122442037_122442117_122449573_122449738_122451533_122451634_122451975_122452065_122453869_122454002_122457725_122457849_122459438
H1_mix_00065025	chr3	-	4805	22	FSM	ENSG00000082684.16	ENST00000648990.1	4805	22	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	29.1433239925259	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATCTTTAATAGATGATA	NA	False	NA	NA	False	NA	NA	NA	123027878	122909081	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_122910302_122910839_122911046_122911490_122911536_122911919_122912070_122912171_122912343_122912842_122913062_122913198_122913425_122913536_122913682_122913857_122914002_122915439_122915622_122915772_122915891_122921914_122922123_122922239_122922448_122923616_122923753_122926391_122926678_122927789_122928004_122928516_122928616_122928995_122929059_122939424_122939471_122943435_122943536_122948505_122948710_123027463
H1_mix_00065026	chr3	-	4205	11	NNC	ENSG00000173175.15	novel	6643	21	NA	NA	3152	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_10	21.2602916254693	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCCTGGTCTGATTTGC	NA	False	NA	0	True	ATTAAA	-16	NA	123315000	123282295	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_123284737_123286684_123286810_123289749_123289955_123291112_123291377_123296083_123296217_123297352_123297383_123300119_123300296_123303054_123303220_123304066_123304184_123314234_123314323_123314539
H1_mix_00065027	chr3	-	4305	9	NIC	ENSG00000173175.15	novel	6643	21	NA	NA	3152	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_8	21.8771427521969	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCCTGGTCTGATTTGC	NA	False	NA	0	True	ATTAAA	-16	NA	123315000	123282295	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_123284737_123286684_123286810_123289749_123289955_123291112_123291377_123296083_123296217_123297352_123297383_123300119_123300296_123303054_123303220_123314234
H1_mix_00065028	chr3	-	6643	21	FSM	ENSG00000173175.15	ENST00000462833.6	6643	21	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_14	32.0538219250061	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCCTGGTCTGATTTGC	0	True	NA	0	True	ATTAAA	-16	NA	123449090	123282295	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_123284737_123286684_123286810_123289749_123289955_123291112_123291377_123296083_123296217_123297352_123297383_123300119_123300296_123303054_123303220_123304066_123304184_123314234_123314323_123318019_123318118_123319673_123319819_123320748_123320772_123325321_123325463_123327617_123327760_123328643_123328803_123330888_123331017_123332563_123332676_123347781_123347904_123352431_123352582_123447411
H1_mix_00065029	chr3	-	4159	8	NNC	ENSG00000206527.10	novel	4125	7	NA	NA	0	14609	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	109.417194485052	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACTATGTTGTACTGAGC	-11	True	NA	NA	False	NA	NA	NA	123585053	123476210	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_123476241_123491549_123494971_123500514_123500694_123502559_123502682_123528385_123528475_123567761_123567781_123582211_123582330_123584872
H1_mix_00065033	chr3	-	3519	11	NIC	ENSG00000175455.16	novel	3815	12	NA	NA	0	0	intron_retention	FALSE	canonical	2	3	junction_1	70.8779937639321	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGAACCTCCTCGTGTT	164	False	NA	-37	True	ATTAAA	-15	NA	123961272	123913724	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_123915719_123933672_123933756_123944848_123944991_123946802_123947320_123948690_123948786_123948895_123949133_123955842_123955966_123956045_123956116_123956354_123956428_123956739_123956796_123961143
H1_mix_00065038	chr3	-	2675	11	NIC	ENSG00000221955.11	novel	3485	14	NA	NA	17	-17	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	21.0021427478246	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCAAAAGATATATAGAGTG	17	False	NA	-20	True	AATAAA	-24	NA	125212731	125083159	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_125084053_125107480_125108127_125110188_125110336_125118768_125118857_125120598_125120687_125135668_125135783_125177742_125177975_125187236_125187429_125190374_125190522_125211298_125211395_125212699
H1_mix_00065039	chr3	-	2906	13	NIC	ENSG00000221955.11	novel	3485	14	NA	NA	32	-17	combination_of_known_splicesites	FALSE	canonical	2	3	junction_5	25.0765494702388	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCAAAAGATATATAGAGTG	NA	False	NA	-20	True	AATAAA	-24	NA	125212832	125083159	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_125084053_125088309_125088371_125091438_125091557_125092100_125092199_125107480_125108127_125118768_125118857_125120598_125120687_125135668_125135783_125177742_125177975_125187236_125187429_125190374_125190522_125211298_125211395_125212699
H1_mix_00065046	chr3	-	2476	4	NIC	ENSG00000248787.2	novel	427	3	NA	NA	-1486	230	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	7.78888096369861	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCATGCTACTGTCAAGA	NA	False	NA	-62	True	ATTAAA	-3	NA	125911758	125907534	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_125908255_125908436_125908561_125908781_125908875_125910219
H1_mix_00065047	chr3	-	1107	2	NNC	ENSG00000248787.2	novel	427	3	NA	NA	618	-1298	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	40	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTTGAAATCTGGCCCG	NA	False	NA	NA	False	NA	NA	NA	125915742	125909302	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_125910320_125915652
H1_mix_00065048	chr3	-	7591	7	FSM	ENSG00000114544.17	ENST00000512557.5	3828	7	-3757	-6	-3757	0	multi-exon	FALSE	canonical	3	12	junction_1	26.5267160927746	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTTATGTCTTTAAAGAT	NA	False	NA	-29	True	AATAAA	-21	NA	126029547	126006356	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_126006565_126007113_126007226_126008731_126008881_126012614_126012750_126015493_126015574_126016730_126016876_126022785
H1_mix_00065050	chr3	-	3502	7	ISM	ENSG00000070476.15	ENST00000389709.8	3377	10	-146	20934	-146	2548	5prime_fragment	FALSE	canonical	3	57	junction_1	16.0597841413472	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGCGGTGGCTCATACC	-4	True	NA	NA	False	AAAAAG	-14	NA	126476037	126458534	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_126459738_126461534_126462221_126466154_126466326_126470894_126471026_126471972_126472052_126472152_126472306_126474958
H1_mix_00065051	chr3	-	2579	6	FSM	ENSG00000070476.15	ENST00000336332.5	2579	6	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	10.7032705282077	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGGGGTTTATGAGCCTT	44	True	NA	NA	False	AAGAAA	-9	NA	126475865	126461082	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_126462221_126466154_126466326_126470894_126471026_126471972_126472052_126472152_126472306_126474958
H1_mix_00065053	chr3	-	1882	12	NNC	ENSG00000163870.16	novel	4235	13	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_10	77.9316292847468	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTGCTAATGTGGAGGTT	16	False	NA	-21	True	AATAAA	-16	NA	127598213	127573070	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_127573789_127575184_127575266_127575402_127575506_127575748_127575810_127575939_127576051_127576616_127576697_127576820_127576894_127576989_127577077_127579739_127579873_127580021_127580164_127594799_127594934_127598054
H1_mix_00065054	chr3	-	1855	10	FSM	ENSG00000163870.16	ENST00000393400.6	1831	10	0	-24	0	0	multi-exon	FALSE	canonical	3	16	junction_3	70.5923788423176	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCTAATGTGGAGGTTTT	-10	True	NA	-19	True	AATAAA	-18	NA	127590734	127573068	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_127573789_127575184_127575266_127575402_127575506_127575939_127576051_127576616_127576697_127576820_127576894_127576989_127577077_127579739_127579873_127580021_127580164_127590409
H1_mix_00065057	chr3	-	913	5	FSM	ENSG00000175792.12	ENST00000472125.5	913	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	417.215172303213	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAGTTATTAGACTCATG	NA	False	NA	NA	False	AATAAA	-15	NA	128101619	128064781	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_128065221_128097299_128097499_128098881_128098946_128100594_128100745_128101558
H1_mix_00065058	chr3	-	872	6	FSM	ENSG00000175792.12	ENST00000478892.1	872	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	405.054366721308	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCCCTGGGCTTGGGGCT	NA	False	NA	NA	False	NA	NA	NA	128100744	128081181	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_128081410_128082482_128082575_128087705_128087845_128097299_128097499_128098881_128098946_128100594
H1_mix_00065059	chr3	-	700	2	FSM	ENSG00000231305.4	ENST00000480931.1	700	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGGGGCAAGGAGCTCAA	NA	False	NA	NA	False	NA	NA	NA	128865604	128861545	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_128861923_128865281
H1_mix_00065060	chr3	-	4453	4	NNC	ENSG00000172780.17	novel	4478	3	NA	NA	-12	0	intron_retention	TRUE	canonical	0	0	junction_1	98.9949493661167	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGCGCCCAGGACTGGT	334	False	NA	NA	False	ATTAAA	-18	NA	129121816	129087571	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_129090410_129090432_129091347_129094985_129095170_129121299
H1_mix_00065062	chr3	-	837	10	FSM	ENSG00000240682.10	ENST00000485703.1	837	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	97.212253457176	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTATTGGGGTTGGCCCCCT	9438	False	NA	55	True	NA	NA	NA	129161028	129134074	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_129134196_129134831_129134955_129140367_129140486_129144067_129144190_129145760_129145874_129156632_129156676_129156854_129156921_129158507_129158560_129159153_129159177_129160972
H1_mix_00065063	chr3	-	407	1	FSM	ENSG00000273437.1	ENST00000609183.1	335	1	-97	25	-97	-25	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTAATAAAATCAGATTTT	7672	False	NA	-31	True	AATACA	-3	NA	129164037	129163630	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_129163600_129164000
H1_mix_00065064	chr3	-	1620	5	NIC	ENSG00000169714.17	novel	1626	5	NA	NA	0	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_2	2777.87054233994	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGACAGTTTGGACTTTTC	-2	True	NA	-15	True	ATTAAA	-24	NA	129183896	129169483	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_129170571_129171078_129171281_129171445_129171539_129171654_129171772_129183775
H1_mix_00065065	chr3	-	1626	5	FSM	ENSG00000169714.17	ENST00000446936.6	1623	5	0	-3	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2777.87054233994	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGACAGTTTGGACTTTTC	-5	True	NA	-15	True	ATTAAA	-24	NA	129183899	129169483	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_129170571_129171078_129171284_129171445_129171539_129171654_129171772_129183775
H1_mix_00065068	chr3	-	963	1	FSM	ENSG00000286729.1	ENST00000652851.1	1030	1	21	46	21	-46	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGTCTGCAGAAGTAGC	NA	False	NA	NA	False	NA	NA	NA	129278761	129277798	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_129277800_129278800
H1_mix_00065069	chr3	-	5290	5	NIC	ENSG00000251474.7	novel	2161	5	NA	NA	-12	1787	intron_retention	FALSE	canonical	1	1	junction_4	12.2754836971909	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTCTCGTGCCCACTCCTC	NA	False	NA	NA	False	NA	NA	NA	129399667	129389367	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_129393796_129396216_129396421_129397039_129397141_129399007_129399496_129399598
H1_mix_00065071	chr3	-	2457	8	FSM	ENSG00000129071.10	ENST00000503197.5	2099	8	-28	-330	0	11	multi-exon	FALSE	canonical	3	44	junction_1	110.512350404092	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATTGTGTATTGTTGAC	-10	True	NA	NA	False	AATAAA	-37	NA	129440035	129430935	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_129431579_129432555_129432607_129433097_129433248_129433849_129433985_129434061_129434137_129436442_129437309_129437719_129437951_129439729
H1_mix_00065073	chr3	-	508	3	FSM	ENSG00000004399.13	ENST00000503166.1	626	3	118	0	-57	0	multi-exon	FALSE	canonical	3	54	junction_1	4.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTCGGCAGGGCGGGGA	1496	False	NA	NA	False	NA	NA	NA	129566048	129563093	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_129563241_129565339_129565539_129565886
H1_mix_00065076	chr3	-	507	4	FSM	ENSG00000004399.13	ENST00000505237.2	507	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	26.8824602048746	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTCCTGGGGGAGGCAA	NA	False	NA	NA	False	NA	NA	NA	129589527	129585951	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_129586049_129586171_129586273_129586587_129586720_129589350
H1_mix_00065079	chr3	-	528	2	FSM	ENSG00000114686.9	ENST00000506487.1	634	2	0	106	0	-106	multi-exon	FALSE	canonical	3	1275	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCATTGTTCAATTCCCA	NA	False	NA	NA	False	NA	NA	NA	131490023	131487255	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_131487741_131489980
H1_mix_00065080	chr3	-	2214	2	FSM	ENSG00000196353.13	ENST00000514439.1	2312	2	82	16	82	-2	multi-exon	FALSE	canonical	3	6	junction_1	0	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTCTAAGAGTTGTGG	4441	False	NA	NA	False	AATAAA	-15	NA	131543011	131533570	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_131535330_131542556
H1_mix_00065081	chr3	-	3680	20	NIC	ENSG00000240303.8	novel	3231	20	NA	NA	107	125	combination_of_known_junctions	FALSE	canonical	2	8	junction_6	15.3227511759836	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCCCTTCCCTGAATTT	990	False	NA	NA	False	NA	NA	NA	132659955	132558012	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_132559086_132559832_132559943_132561100_132561218_132575771_132575927_132576943_132577016_132578795_132579057_132579491_132579559_132603228_132603328_132605097_132605206_132618633_132618773_132619467_132619546_132626690_132626818_132628339_132628447_132630436_132630559_132631340_132631480_132639491_132639657_132641971_132642134_132642676_132642803_132644796_132644897_132659602
H1_mix_00065082	chr3	-	3602	19	NIC	ENSG00000240303.8	novel	3231	20	NA	NA	-242	-5	intron_retention	FALSE	canonical	3	8	junction_9	16.4785681986192	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTACAATTTTGTAATTTG	621	False	NA	-8	True	ATTAAA	-14	NA	132660324	132558145	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_132559086_132559832_132559943_132561100_132561218_132575771_132575927_132576943_132577016_132578795_132578882_132579491_132579559_132603228_132603328_132605097_132605206_132619467_132619546_132626690_132626818_132628339_132628447_132630436_132630559_132631340_132631480_132639491_132639657_132641971_132642134_132642676_132642803_132644796_132644897_132659602
H1_mix_00065083	chr3	-	1164	6	FSM	ENSG00000240303.8	ENST00000487024.1	1188	6	24	0	24	0	multi-exon	FALSE	canonical	3	58	junction_3	5.84465567848098	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCAAAGGCAATAATCTTG	60	False	NA	NA	False	AATGAA	-16	NA	132627050	132579178	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_132579559_132603228_132603328_132605097_132605206_132618633_132618773_132619467_132619546_132626690
H1_mix_00065084	chr3	-	1891	11	FSM	ENSG00000240303.8	ENST00000481970.2	1891	11	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	6.43816744112795	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACTGATTACCTACTATG	3	True	NA	NA	False	AATAAA	-19	NA	132659844	132618249	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_132618773_132619467_132619546_132626690_132626818_132628339_132628447_132630436_132630559_132631340_132631480_132639491_132639657_132641971_132642134_132642676_132642803_132644796_132644897_132659602
H1_mix_00065085	chr3	-	5361	26	ISM	ENSG00000274810.4	ENST00000471702.2	7784	45	-62	122468	-62	-35772	5prime_fragment	FALSE	canonical	2	4	junction_14	7.57955143791504	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTCCCCACTCTAGTT	-5	True	NA	-25	True	AATAAA	-17	NA	132722521	132680609	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_132682091_132682702_132682819_132683398_132683525_132684553_132684795_132686259_132686388_132687150_132687227_132688649_132688892_132689073_132689264_132690527_132690651_132691191_132691287_132692653_132692819_132694826_132694966_132696730_132696814_132697259_132697363_132699917_132700062_132700333_132700449_132701429_132701534_132704197_132704372_132705739_132705815_132708100_132708258_132713125_132713287_132715084_132715219_132716756_132716910_132718993_132719145_132719704_132719831_132721962
H1_mix_00065094	chr3	-	280	1	FSM	ENSG00000260633.1	ENST00000568384.1	1946	1	1709	-43	1709	43	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTTGAATAGAATTTGTG	9180	False	NA	NA	False	NA	NA	NA	134347524	134347244	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_134347200_134347500
H1_mix_00065096	chr3	-	853	6	FSM	ENSG00000118007.13	ENST00000462818.1	1227	6	0	374	0	-374	multi-exon	FALSE	canonical	3	72	junction_4	8.73155198117723	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTAATTATGATTTATGT	NA	False	NA	NA	False	NA	NA	NA	136604473	136500139	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_136500297_136502627_136502780_136521212_136521418_136542118_136542196_136568764_136568862_136604308
H1_mix_00065097	chr3	-	1122	1	FSM	ENSG00000272609.1	ENST00000609721.1	474	1	-900	252	-900	-252	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTTACTTTTTCTTTGT	NA	False	NA	NA	False	AATAAA	-25	NA	138006022	138004900	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_138004900_138006000
H1_mix_00065098	chr3	-	1811	14	FSM	ENSG00000114107.9	ENST00000489254.5	1811	14	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_12	94.2367031098698	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTTTTAGAGTGGAGTT	26	False	NA	NA	False	NA	NA	NA	138594319	138494757	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_138495077_138498030_138498111_138500109_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138591853_138591957_138594197
H1_mix_00065099	chr3	-	2070	17	NIC	ENSG00000114107.9	novel	2636	18	NA	NA	-4	-40	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	93.3116418245869	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTCATTTCTAAAGCAATT	24	True	NA	NA	False	NA	NA	NA	138594228	138494797	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_138495077_138500109_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138572858_138572933_138591853_138591957_138594197
H1_mix_00065109	chr3	-	3734	23	FSM	ENSG00000184432.11	ENST00000512242.6	3734	23	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_22	261.223630485389	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTTTCTTGACCTCATT	NA	False	NA	-5	True	NA	NA	NA	139389680	139357405	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_139357959_139358199_139358272_139358743_139358813_139358997_139359179_139359269_139359363_139361080_139361296_139362406_139362518_139366567_139366776_139367014_139367146_139368144_139368289_139369260_139369368_139369455_139369545_139371722_139371834_139373212_139373413_139373665_139373809_139374488_139374589_139375467_139375615_139378040_139378190_139379046_139379174_139379379_139379467_139383297_139383436_139385003_139385430_139389547
H1_mix_00065110	chr3	-	1827	5	FSM	ENSG00000163864.17	ENST00000339837.9	1863	5	14	22	-12	3	multi-exon	FALSE	canonical	0	0	junction_3	3.08220700148449	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATTGACATCAAAAAG	-5	True	NA	NA	False	GATAAA	-2	NA	139677984	139560212	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_139561393_139573597_139573681_139578871_139579056_139637962_139638063_139677704
H1_mix_00065112	chr3	-	274	1	FSM	ENSG00000249540.1	ENST00000514722.1	322	1	14	34	14	-34	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTCCATGAACGTCAAAAA	NA	False	NA	NA	False	NA	NA	NA	141307919	141307645	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_141307600_141307900
H1_mix_00065113	chr3	-	471	1	FSM	ENSG00000249986.1	ENST00000508556.1	304	1	-172	5	-172	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	216	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGCTGAAAACTAAATACAT	NA	False	NA	NA	False	NA	NA	NA	141600751	141600280	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_141600300_141600800
H1_mix_00065114	chr3	-	9342	10	FSM	ENSG00000114126.18	ENST00000499676.5	9335	10	0	-7	0	0	multi-exon	FALSE	canonical	3	20	junction_9	188.270490990431	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAGTCTCATTACTAGTG	17	False	NA	-13	True	AATAAA	-14	NA	142000353	141944427	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974192_141978519_141978683_141993537_141993586_141995019_141995142_142000251
H1_mix_00065115	chr3	-	1853	14	FSM	ENSG00000114126.18	ENST00000467072.5	1853	14	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_10	236.892555476606	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCATGTGTGTTTGTAGT	1	True	NA	-23	True	AATAAA	-32	NA	142149532	141952480	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974195_141978519_141978683_141993537_141993586_141995019_141995142_142005440_142005545_142054114_142054150_142093060_142093128_142101734_142101842_142149182
H1_mix_00065116	chr3	-	1134	9	NIC	ENSG00000114126.18	novel	1442	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_7	190.680852473446	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTCAATATGTGATGCTC	-2	True	NA	-38	True	AATAAA	-17	NA	142028606	141952495	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974192_141978519_141978683_142005440_142005545_142028578
H1_mix_00065117	chr3	-	1235	10	NIC	ENSG00000114126.18	novel	1469	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	12	junction_4	186.573257051791	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTCAATATGTGATGCTC	-2	True	NA	-38	True	AATAAA	-17	NA	142028606	141952495	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141974047_141974192_141978519_141978683_141993537_141993586_141995019_141995142_142005440_142005545_142028578
H1_mix_00065118	chr3	-	1469	13	FSM	ENSG00000114126.18	ENST00000487734.5	1469	13	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_10	245.74116916427	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTCAATATGTGATGCTC	29	False	NA	-38	True	AATAAA	-17	NA	142101757	141952495	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974192_141978519_141978683_141993537_141993586_141995019_141995142_142000251_142000355_142005440_142005545_142093060_142093128_142101734
H1_mix_00065119	chr3	-	1571	11	NIC	ENSG00000114126.18	novel	1853	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_7	243.586227032646	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTCAATATGTGATGCTC	12	True	NA	-38	True	AATAAA	-17	NA	142149470	141952495	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974195_141978519_141978683_142005440_142005545_142093060_142093128_142101734_142101842_142149182
H1_mix_00065128	chr3	-	10049	41	NIC	ENSG00000114127.11	novel	10079	41	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_6	6.21364426081828	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTGTTTGTTCTTTTAT	4	True	NA	-2	True	ATTAAA	-19	NA	142448010	142306609	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_142311814_142312597_142312759_142318591_142318695_142318789_142318904_142329433_142329616_142332374_142332532_142332966_142333090_142335447_142335510_142347233_142347343_142355400_142355497_142356911_142357120_142359861_142359932_142365046_142365180_142365309_142365367_142370484_142370621_142371238_142371329_142375797_142375945_142376478_142376595_142380081_142380181_142383299_142383414_142384522_142384686_142397328_142397461_142400443_142400548_142403673_142403773_142403868_142403990_142404906_142405077_142412543_142412664_142414134_142414292_142417139_142417230_142418503_142418610_142418814_142418882_142421015_142421154_142421475_142421544_142422581_142422751_142422834_142422923_142423559_142423643_142425221_142425333_142425428_142425539_142426743_142426842_142432660_142432894_142447869
H1_mix_00065129	chr3	-	7056	44	FSM	ENSG00000175054.16	ENST00000656590.1	7056	44	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	18.9235174650593	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTGCATTATAATTGGA	4878	False	NA	76	True	AATAAA	-17	NA	142561381	142449234	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_142449603_142450465_142450603_142453127_142453234_142457603_142457756_142458957_142459112_142459226_142459384_142461939_142462091_142465096_142465241_142466323_142466534_142467933_142468069_142469336_142469570_142470085_142470184_142485139_142485283_142493131_142493312_142496360_142496521_142497012_142497193_142498596_142498775_142499626_142499719_142503361_142503454_142505138_142505304_142507930_142508110_142512259_142512471_142513500_142513639_142515394_142515516_142519668_142519785_142522727_142522842_142523992_142524200_142535079_142535206_142536107_142536202_142538481_142538626_142540903_142541035_142542664_142542758_142547724_142547911_142549478_142549674_142550131_142550303_142553226_142553399_142553639_142553741_142553824_142554016_142555876_142556140_142556382_142556576_142558623_142558777_142559250_142559442_142560262_142560455_142561242
H1_mix_00065131	chr3	-	773	7	FSM	ENSG00000163710.9	ENST00000480473.5	773	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	53.7204699243118	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGGAAATTTGGCGATTC	NA	False	NA	NA	False	NA	NA	NA	142848344	142820966	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_142821046_142823531_142823616_142829691_142829847_142838769_142838907_142842923_142843049_142843244_142843310_142848216
H1_mix_00065135	chr3	-	2485	1	FSM	ENSG00000188582.10	ENST00000340634.6	9090	1	-41	6646	-41	-6646	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGGTCCTCAAACACAG	287	False	NA	NA	False	AATAAA	-26	NA	142963715	142961230	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_142961200_142963700
H1_mix_00065136	chr3	-	545	6	NNC	ENSG00000181804.15	novel	3564	16	NA	NA	50753	-26166	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	3.6	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCCTTTGTCTGTATGTG	NA	False	NA	NA	False	NA	NA	NA	143797705	143578584	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_143578724_143652254_143652361_143693191_143693308_143795000_143795078_143796825_143796904_143797676
H1_mix_00065138	chr3	-	3724	20	NIC	ENSG00000152952.12	novel	3749	20	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_18	69.3910194002596	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTGTTCTATTATTG	2558	False	NA	-16	True	AATAAA	-14	NA	146161161	146069439	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_146070873_146071041_146071168_146071276_146071424_146072560_146072666_146073286_146073353_146076781_146076896_146079115_146079258_146081737_146081864_146085168_146085274_146086786_146086909_146088585_146088712_146091799_146091902_146102754_146102853_146104278_146104343_146106531_146106645_146110284_146110449_146121111_146121249_146123264_146123326_146124137_146124230_146160880
H1_mix_00065139	chr3	-	2978	4	FSM	ENSG00000152952.12	ENST00000478436.1	3835	4	0	857	0	-857	multi-exon	FALSE	canonical	3	43	junction_1	100.740590958494	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTATTTCATACTCAAC	135	False	NA	NA	False	NA	NA	NA	146086735	146076781	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_146077925_146079115_146079258_146081737_146081864_146085168
H1_mix_00065140	chr3	-	872	5	NNC	ENSG00000241358.1	novel	705	5	NA	NA	4853	54974	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1280.22517550625	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGTTTCCATAGTAGGAA	NA	False	NA	NA	False	NA	NA	NA	146411724	146336388	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_146336424_146391419_146391563_146395759_146395922_146401359_146401560_146411392
H1_mix_00065141	chr3	-	653	4	NNC	ENSG00000163746.12	novel	574	4	NA	NA	48360	55027	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1694.72757561667	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCCTTGGTTTCCATAGT	NA	False	NA	NA	False	NA	NA	NA	146411714	146336393	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_146336425_146391424_146391563_146395759_146395922_146411392
H1_mix_00065142	chr3	-	652	4	NNC	ENSG00000163746.12	novel	574	4	NA	NA	48360	55027	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1694.72757561667	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCCTTGGTTTCCATAGT	NA	False	NA	NA	False	NA	NA	NA	146411714	146336393	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_146336424_146391424_146391563_146395759_146395922_146411392
H1_mix_00065143	chr3	-	2034	10	NNC	ENSG00000188313.13	novel	1976	9	NA	NA	0	21397	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	148.256367881059	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCACCTTGGACTGAAAAAC	220	False	NA	NA	False	NA	NA	NA	146544641	146493782	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_146493809_146515181_146516102_146517005_146517168_146521543_146521706_146521832_146522054_146525604_146525648_146528613_146528832_146533469_146533551_146536539_146536566_146544466
H1_mix_00065144	chr3	-	2023	9	NIC	ENSG00000188313.13	novel	1976	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_4	154.134225190254	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGATTTTTGTTTTTAA	5	True	NA	-23	True	AATAAA	-18	NA	146544726	146515179	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_146516102_146517005_146517168_146521543_146521706_146521832_146521982_146525604_146525648_146528613_146528832_146533469_146533551_146536539_146536566_146544466
H1_mix_00065148	chr3	-	4523	26	NIC	ENSG00000071794.16	novel	3896	26	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_7	115.302981748088	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTACCTTCCTCGGTGCCA	NA	False	NA	-23	True	AATAAA	-14	NA	149086561	149030126	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_149031364_149032200_149032373_149034917_149034999_149039048_149039230_149039580_149039694_149040030_149040157_149041489_149041681_149042165_149042291_149046079_149046260_149048027_149048164_149048862_149049002_149050231_149050376_149055302_149055401_149059717_149059808_149060642_149060688_149060778_149060859_149063430_149063525_149064790_149064867_149068239_149068336_149071251_149071444_149071582_149071658_149073224_149073323_149074214_149074349_149075880_149076048_149084681_149084890_149086316
H1_mix_00065151	chr3	-	231	2	FSM	ENSG00000047457.14	ENST00000473296.1	496	2	0	265	0	113	multi-exon	FALSE	canonical	2	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAATATCCAGGTAGTAAT	NA	False	NA	NA	False	AATGAA	-2	NA	149177907	149176249	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_149176413_149177839
H1_mix_00065156	chr3	-	1601	4	NNC	ENSG00000070087.15	novel	911	4	NA	NA	-14	58258	intron_retention	FALSE	non_canonical	0	0	junction_1	487.344733108801	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAGAATTGAACAAATGAAA	1046	False	NA	NA	False	ATTAAA	-22	NA	149970749	149906645	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_149906671_149964906_149966265_149968357_149968551_149970724
H1_mix_00065157	chr3	-	1732	4	NNC	ENSG00000070087.15	novel	911	4	NA	NA	0	23373	intron_retention	FALSE	non_canonical	0	0	junction_1	487.344733108801	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCTAATTTAAAAATGAGAAA	15	True	NA	NA	False	AGTAAA	-19	NA	149970882	149941530	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_149941554_149964906_149966265_149968357_149968551_149970724
H1_mix_00065159	chr3	-	286	1	FSM	ENSG00000241671.1	ENST00000477323.1	567	1	243	38	243	-38	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGAACTTGGTGCTGCT	NA	False	NA	NA	False	NA	NA	NA	153129397	153129111	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_153129100_153129400
H1_mix_00065160	chr3	-	7445	25	NNC	ENSG00000174953.14	novel	6723	25	NA	NA	2	720	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	96.2104807036231	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATATAAGTCTTTGTGTG	-12	True	NA	-7	True	AATAAA	-16	NA	154324485	154271825	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_154276357_154276746_154276900_154277597_154277719_154280578_154280670_154280762_154280863_154283187_154283272_154284582_154284670_154284813_154284988_154288865_154288965_154289708_154289827_154292550_154292695_154293747_154293813_154295283_154295340_154299837_154299926_154300593_154300697_154300986_154301128_154303328_154303411_154304805_154304973_154305089_154305169_154306215_154306296_154309652_154309824_154311635_154311675_154315045_154315281_154316038_154316164_154324173
H1_mix_00065164	chr3	-	817	4	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	125	junction_1	191.86163996195	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTGCAACAATTTGAAAAA	NA	False	NA	-21	True	ATTAAA	-6	NA	155280508	155250528	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr3_-_155250827_155258618_155258683_155278366_155278560_155280246
H1_mix_00065166	chr3	-	810	4	Intergenic	novelGene_953	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	226	junction_1	138.528777595928	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGGTTATATCCTCTG	-4	False	NA	-20	True	AATAAA	-22	NA	155280499	155260380	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_155260624_155265037_155265159_155278366_155278560_155280246
H1_mix_00065167	chr3	-	818	4	Intergenic	novelGene_954	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	211.307569407461	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGGTTATATCCTCTG	-4	False	NA	-20	True	AATAAA	-22	NA	155280499	155260380	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_155260624_155265029_155265159_155278366_155278560_155280246
H1_mix_00065169	chr3	-	2404	7	FSM	ENSG00000169359.16	ENST00000359479.7	2404	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	41.8864204990379	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTACATATGAAATGTGT	-18	True	NA	-12	True	AATAAA	-18	NA	155854429	155826525	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_155826820_155828181_155828378_155829687_155829904_155833467_155833586_155833856_155834042_155842431_155842620_155853222
H1_mix_00065170	chr3	-	347	1	FSM	ENSG00000242017.1	ENST00000482834.1	794	1	478	-31	478	31	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGTCCTTCCCGCAGC	976	False	NA	NA	False	CATAAA	-31	NA	156044470	156044123	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_156044100_156044500
H1_mix_00065172	chr3	-	3215	3	FSM	ENSG00000240875.6	ENST00000488584.2	3215	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGTACAATATTTATTCAA	NA	False	NA	NA	False	NA	NA	NA	156751525	156747392	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_156750415_156751094_156751184_156751421
H1_mix_00065174	chr3	-	3843	7	FSM	ENSG00000163660.12	ENST00000464316.5	3843	7	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_6	23.3339285638364	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTCAAATACCTTATTTA	6095	False	NA	-6	True	AATAAA	-25	NA	157154666	157147794	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_157148590_157149286_157149386_157149484_157149597_157149835_157149978_157150064_157150170_157150281_157150382_157152176
H1_mix_00065183	chr3	-	1013	1	FSM	ENSG00000244515.1	ENST00000488218.1	1270	1	279	-22	279	22	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGGAGCAGGAGGCCAAT	NA	False	NA	NA	False	NA	NA	NA	157163653	157162640	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_157162600_157163700
H1_mix_00065186	chr3	-	773	4	NIC	ENSG00000197415.12	novel	992	4	NA	NA	71	-12	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	21.2759645296439	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCATGCAAAATATTCTCC	4730	False	NA	-22	True	AATGAA	-17	NA	157499483	157459633	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_157459927_157460180_157460356_157470313_157470530_157499394
H1_mix_00065187	chr3	-	499	4	FSM	ENSG00000118849.10	ENST00000479756.1	839	4	170	170	170	-12	multi-exon	FALSE	canonical	1	1	junction_2	0.942809041582063	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCACAGCTCACTAGTGT	501	False	NA	NA	False	NA	NA	NA	158732272	158704820	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_158704928_158710737_158710934_158713796_158713860_158732139
H1_mix_00065193	chr3	-	4387	2	FSM	ENSG00000186432.10	ENST00000678839.1	4391	2	4	0	4	0	multi-exon	FALSE	canonical	3	374	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTTGGGGAAATAAACAT	7884	False	NA	-70	True	NA	NA	NA	160507350	160500208	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_160502203_160504957
H1_mix_00065194	chr3	-	363	1	FSM	ENSG00000238741.1	ENST00000458797.1	330	1	-95	62	-95	-62	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAGCCTGGCACCCTAAAA	NA	False	NA	NA	False	NA	NA	NA	160515331	160514968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_160515000_160515300
H1_mix_00065196	chr3	-	1660	5	FSM	ENSG00000169255.15	ENST00000488170.5	1660	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	24.9236333627343	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCACATTCTACAAAAAGC	268	False	NA	NA	False	NA	NA	NA	161105140	161085758	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_161086789_161101138_161101234_161103426_161103518_161104318_161104407_161104784
H1_mix_00065197	chr3	-	541	4	FSM	ENSG00000169255.15	ENST00000498216.5	541	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	26.5497436689865	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGCCGATTTACAGACA	458	False	NA	NA	False	NA	NA	NA	161104950	161086592	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_161086789_161103426_161103518_161104318_161104407_161104784
H1_mix_00065199	chr3	-	4401	6	Intergenic	novelGene_960	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	243	junction_1	97.6823423142586	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTGTTGTTCTTTCTT	0	True	NA	-8	True	AATAAA	-13	NA	164341489	164026599	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_164029783_164030259_164030697_164074387_164074606_164075972_164076045_164193507_164193677_164341167
H1_mix_00065200	chr3	-	2731	5	Intergenic	novelGene_961	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	243	junction_1	358.78780288633	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATCTACCTTTTGTCGGT	0	True	NA	NA	False	AATAAA	-20	NA	164341489	164028197	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_164029783_164030259_164030697_164074387_164074606_164193507_164193677_164341167
H1_mix_00065201	chr3	-	2354	7	Intergenic	novelGene_962	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	36	junction_5	446.956746602323	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAATCTTTCTCACTGGT	0	True	NA	NA	False	TTTAAA	-26	NA	164341489	164028786	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_164029783_164030259_164030697_164074387_164074606_164193507_164193677_164196618_164196701_164257931_164258062_164341167
H1_mix_00065202	chr3	-	1601	7	Intergenic	novelGene_963	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	67	junction_2	360.319033018734	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACCTGCCCAAATGTTGT	0	True	NA	-18	True	ATTAAA	-5	NA	164341489	164029289	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_164029783_164030259_164030505_164074387_164074606_164075972_164076045_164193507_164193677_164196618_164196701_164341167
H1_mix_00065203	chr3	-	1140	1	Intergenic	novelGene_965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTTCACTTTGATTTTCA	NA	False	NA	-19	True	AATAAA	-11	NA	164051932	164050792	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_164050800_164051900
H1_mix_00065204	chr3	-	2975	5	Intergenic	novelGene_968	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	153	junction_4	348.407358561785	44	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATGTTATTCTTTTTATC	NA	False	NA	-7	True	TATAAA	-20	NA	164341493	164072225	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_164074606_164075972_164076045_164193507_164193677_164196618_164196701_164341221
H1_mix_00065205	chr3	-	1798	1	Intergenic	novelGene_977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCCTCACCTATAAAATG	5804	False	NA	NA	False	NA	NA	NA	164096560	164094762	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_164094800_164096600
H1_mix_00065206	chr3	-	4393	2	FSM	ENSG00000121871.4	ENST00000241274.3	4391	2	0	-2	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	446	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATTATATATAGAGGATA	14	False	NA	NA	False	AATAAA	-20	NA	165196852	165186719	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_165190852_165196591
H1_mix_00065208	chr3	-	756	3	FSM	ENSG00000169064.13	ENST00000465071.1	756	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	2	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCAAGGGCTTATTCTTCC	NA	False	NA	-10	True	AATAAA	-14	NA	167282572	167240637	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_167240920_167242504_167242644_167282237
H1_mix_00065215	chr3	-	747	1	Genic_Genomic	ENSG00000173905.9	novel	NA	NA	NA	NA	35466	20	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTCTCTTATTAGTTTA	12	False	NA	1	True	AATAAA	-35	NA	168009415	168008668	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr3_-_168008700_168009400
H1_mix_00065216	chr3	-	406	1	FSM	ENSG00000213178.3	ENST00000418623.1	410	1	58	-54	58	54	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGTGGTTTATCCTTGT	NA	False	NA	NA	False	AATAAA	-13	NA	169484022	169483616	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_169483600_169484000
H1_mix_00065220	chr3	-	10091	8	FSM	ENSG00000013293.6	ENST00000231706.6	10140	8	0	49	0	-49	multi-exon	FALSE	canonical	0	0	junction_7	2.87139303460597	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTAAAAAGTACAGCTAA	-7	True	NA	NA	False	AATAAA	-3	NA	170586075	170459596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_170467378_170480288_170481167_170483313_170483523_170486221_170486369_170498666_170498885_170501108_170501346_170526632_170527089_170585910
H1_mix_00065221	chr3	-	545	4	FSM	ENSG00000163584.18	ENST00000466674.5	545	4	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_3	595.288352164077	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTCTCATTTTTTTGA	-2	True	NA	40	True	AATAAA	-19	NA	170870033	170866263	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_170866525_170868012_170868135_170868297_170868391_170869964
H1_mix_00065222	chr3	-	2297	12	FSM	ENSG00000154310.17	ENST00000496492.5	2736	12	439	0	439	0	multi-exon	FALSE	canonical	3	62	junction_10	11.7029345758212	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTAGTTTTCCCCTCTTTT	456	False	NA	NA	False	AAAAAG	-11	NA	171101633	171063260	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_171063965_171066186_171066327_171066575_171066736_171068847_171068998_171071222_171071324_171079517_171079653_171082250_171082395_171084154_171084326_171085117_171085230_171087341_171087507_171093838_171093969_171101448
H1_mix_00065223	chr3	-	4727	31	FSM	ENSG00000154310.17	ENST00000341852.10	4727	31	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_17	20.7814019418004	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCACCAACCCAAAAGGT	-6	True	NA	34	True	NA	NA	NA	171460408	171063329	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_171063965_171066186_171066327_171066575_171066736_171068847_171068998_171071222_171071324_171079517_171079653_171082250_171082395_171084154_171084326_171085117_171085230_171087341_171087507_171093838_171093969_171101448_171101634_171107182_171107207_171108064_171108163_171110713_171110878_171123595_171123703_171125911_171126152_171138190_171138380_171140398_171140510_171157459_171157665_171161269_171161337_171167094_171167271_171175251_171175331_171177325_171177381_171188701_171188833_171190696_171190788_171194524_171194636_171211115_171211242_171228164_171228222_171369619_171369686_171460006
H1_mix_00065226	chr3	-	423	4	FSM	ENSG00000075651.17	ENST00000481505.1	491	4	68	0	68	0	multi-exon	FALSE	canonical	2	9	junction_1	2.35702260395516	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTGGGTTCCCTCCCAG	3014	False	NA	NA	False	NA	NA	NA	171708802	171688694	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_171688877_171692331_171692443_171699744_171699827_171708754
H1_mix_00065227	chr3	-	630	3	NNC	ENSG00000288895.1	novel	854	3	NA	NA	-86	-2	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	379	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTGTTTGGTGGTCTCT	NA	False	NA	-5	True	AATAAA	-20	NA	176327154	176321656	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_176322019_176324812_176325001_176327074
H1_mix_00065228	chr3	-	2780	2	NNC	ENSG00000288895.1	novel	854	3	NA	NA	-181	-2	intron_retention	FALSE	canonical	3	118	junction_1	0	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTGTTTGGTGGTCTCT	NA	False	NA	-5	True	AATAAA	-20	NA	176327249	176321656	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_176322019_176324831
H1_mix_00065230	chr3	-	8936	6	FSM	ENSG00000172667.11	ENST00000311417.7	8936	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	12.7655787177864	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTGGTTATGAGTTGAA	-4	True	NA	0	True	AATAAA	-26	NA	179071809	179017222	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_179025229_179027422_179027524_179027645_179027813_179030879_179031000_179067482_179067810_179071594
H1_mix_00065231	chr3	-	2313	1	FSM	ENSG00000240429.1	ENST00000498774.1	2246	1	13	-80	13	80	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTAGAATGTTCTAAAT	5741	False	NA	NA	False	GGGGCT	-21	NA	179261260	179258947	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_179258900_179261300
H1_mix_00065232	chr3	-	5260	11	NNC	ENSG00000114450.11	novel	6315	10	NA	NA	-94	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.1175348692503	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTGTATTTTTTTATG	-1	True	NA	-3	True	AATAAA	-16	NA	179451570	179396087	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_179398301_179399455_179401320_179405189_179405407_179413411_179413614_179413714_179413782_179414884_179415048_179416492_179416557_179419398_179419506_179420888_179420928_179426143_179426243_179451345
H1_mix_00065234	chr3	-	1190	8	FSM	ENSG00000114450.11	ENST00000674927.1	1696	8	0	506	0	-506	multi-exon	FALSE	canonical	3	43	junction_7	8.46842876301653	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCTTTTAGAAATCACACT	NA	False	NA	NA	False	ATTAAA	-27	NA	179426200	179404915	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_179405407_179413411_179413614_179413714_179413782_179414884_179415048_179416492_179416557_179419398_179419506_179420888_179420928_179426143
H1_mix_00065235	chr3	-	923	8	FSM	ENSG00000114450.11	ENST00000465153.2	978	8	0	55	0	-55	multi-exon	FALSE	canonical	2	2	junction_1	19.5990420423956	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTATCTATCTATCTATCA	NA	False	NA	NA	False	AATGAA	-4	NA	179426200	179410373	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_179410598_179413411_179413614_179413714_179413782_179414884_179415048_179416492_179416557_179419398_179419506_179420888_179420928_179426143
H1_mix_00065238	chr3	-	205	1	FSM	ENSG00000272660.1	ENST00000610007.1	140	1	121	-186	121	186	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTTGTTTGAAGCCACT	6405	False	NA	NA	False	NA	NA	NA	179584289	179584084	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_179584100_179584300
H1_mix_00065239	chr3	-	424	4	FSM	ENSG00000114757.19	ENST00000477829.5	543	4	119	0	119	0	multi-exon	FALSE	canonical	2	9	junction_3	0.471404520791032	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAATTGGATTAAGCAAA	NA	False	NA	NA	False	NA	NA	NA	179819972	179809572	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_179809669_179811800_179811872_179815860_179816005_179819859
H1_mix_00065243	chr3	-	2314	18	FSM	ENSG00000078070.14	ENST00000629669.2	2316	18	4	-2	4	0	multi-exon	FALSE	canonical	2	13	junction_6	51.2443768541442	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTTCTGCCTCAAAT	3723	False	NA	0	True	AATAAA	-28	NA	183099573	183015217	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_183015567_183017265_183017338_183020129_183020238_183022416_183022555_183025754_183025805_183033990_183034078_183039025_183039136_183041566_183041751_183045412_183045541_183052158_183052241_183057310_183057423_183070998_183071121_183071209_183071358_183072365_183072488_183086692_183086789_183092408_183092546_183094558_183094606_183099351
H1_mix_00065244	chr3	-	2830	19	NIC	ENSG00000078070.14	novel	2454	19	NA	NA	81	0	combination_of_known_junctions	FALSE	canonical	2	20	junction_18	48.3979453191053	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTTCTGCCTCAAAT	186	False	NA	0	True	AATAAA	-28	NA	183115994	183015217	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_183015567_183017265_183017338_183020129_183020238_183022416_183022555_183025754_183025805_183033990_183034078_183037217_183037435_183039025_183039136_183041566_183041751_183045412_183045541_183052158_183052241_183057310_183057423_183070998_183071121_183071209_183071358_183072365_183072488_183086692_183086789_183092408_183092546_183094558_183094606_183115473
H1_mix_00065247	chr3	-	5451	16	NNC	ENSG00000053524.13	novel	3031	16	NA	NA	20	-463	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_15	21.868902324737	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAAGTATCATCATTCAG	175	False	NA	-25	True	ATTAAA	-36	NA	183428758	183272482	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_183275925_183276871_183276958_183289119_183289221_183295299_183295478_183296975_183297168_183300004_183300197_183309715_183309836_183310914_183311030_183311647_183311773_183318067_183318218_183323234_183323352_183338799_183338920_183341539_183341631_183379296_183379412_183389695_183389780_183428535
H1_mix_00065248	chr3	-	1414	11	NNC	ENSG00000175193.14	novel	1534	11	NA	NA	0	39752	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	333.224683959637	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATGAATCTGAAACCTAAA	-3	True	NA	NA	False	NA	NA	NA	183884879	183789518	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_183789555_183829392_183829710_183833491_183833590_183833723_183833826_183840569_183840641_183842297_183842448_183844230_183844327_183862752_183862802_183866624_183866766_183867864_183868061_183884721
H1_mix_00065249	chr3	-	890	3	FSM	ENSG00000180834.8	ENST00000431348.1	890	3	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_1	21	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCAGTTGGGAACCGAATT	-29	True	NA	NA	False	NA	NA	NA	183825594	183817061	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_183817386_183817993_183818112_183825146
H1_mix_00065253	chr3	-	5873	31	NNC	ENSG00000114770.17	novel	5790	30	NA	NA	0	3513	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	44.695774098031	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTTGGCAGTTGTGTC	9870	False	NA	NA	False	NA	NA	NA	184017939	183916420	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_183916449_183919933_183921402_183925554_183925720_183927329_183927444_183928746_183928826_183937900_183938061_183942726_183942917_183945849_183945940_183947323_183947511_183949752_183949882_183949971_183950126_183951440_183951571_183951856_183952004_183953085_183953271_183959732_183959836_183961510_183961655_183963384_183963589_183965184_183965258_183965376_183965502_183967694_183967767_183971562_183971920_183977516_183977625_183978502_183978652_183981726_183981875_183982450_183982625_183982773_183983008_183987769_183987918_183988571_183988728_183989225_183989384_184014263_184014448_184017829
H1_mix_00065254	chr3	-	5716	29	FSM	ENSG00000114770.17	ENST00000265586.10	5712	29	0	-4	0	0	multi-exon	FALSE	canonical	2	8	junction_8	44.9965276438082	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTCGTGTATCAAACAAT	9870	False	NA	-5	True	AATAAA	-22	NA	184017939	183919933	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_183921402_183925554_183925720_183927329_183927444_183928746_183928826_183937900_183938061_183942726_183942917_183945849_183945940_183947323_183947511_183949971_183950126_183951440_183951571_183951856_183952004_183953085_183953271_183959732_183959836_183961510_183961655_183963384_183963589_183965184_183965258_183965376_183965502_183967694_183967767_183971562_183971920_183977516_183977625_183978502_183978652_183981726_183981875_183982450_183982625_183982773_183983008_183987769_183987918_183988571_183988728_183989225_183989384_184014263_184014448_184017829
H1_mix_00065255	chr3	-	1452	9	NNC	ENSG00000214160.10	novel	1552	9	NA	NA	0	-30	at_least_one_novel_splicesite	FALSE	non_canonical	1	182	junction_8	232.260629466124	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTAAGAGGCACTTTATT	23	True	NA	-5	True	GATAAA	-16	NA	184248929	184242330	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_184242677_184242812_184242957_184243552_184243631_184243790_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184245712_184245813_184248781
H1_mix_00065259	chr3	-	7142	2	FSM	ENSG00000187068.3	ENST00000335012.3	7159	2	0	17	0	-17	multi-exon	FALSE	canonical	3	11	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATTTAGCATCTCATCC	-37	True	NA	NA	False	AATAAA	-2	NA	185153060	185076854	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_185083564_185152627
H1_mix_00065260	chr3	-	568	6	FSM	ENSG00000113790.11	ENST00000475987.1	568	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	31.1088411870323	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTGTAAACTCAGACCC	-7	True	NA	NA	False	NA	NA	NA	185254049	185218193	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_185218241_185226827_185226859_185229431_185229544_185235289_185235463_185248413_185248518_185253948
H1_mix_00065261	chr3	-	3997	10	FSM	ENSG00000163898.10	ENST00000296252.9	4001	10	4	0	4	0	multi-exon	TRUE	canonical	0	0	junction_1	1.77081971672325	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTCTGTTCTCAGAATC	-10	True	NA	NA	False	AATAAA	-17	NA	185552584	185506261	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_185508878_185511523_185511698_185514409_185514522_185517066_185517163_185519141_185519310_185524070_185524161_185527483_185527586_185533570_185533680_185534764_185535133_185552422
H1_mix_00065263	chr3	-	4956	16	NNC	ENSG00000073792.16	novel	4283	16	NA	NA	165	-6	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_15	311.88918259892	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTTTAGTGTCTCACTGC	590	False	NA	-7	True	AATAAA	-12	NA	185824727	185643135	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_185645624_185647024_185647139_185649402_185649535_185652093_185652169_185657285_185657403_185658340_185658410_185675295_185675432_185675790_185675914_185687056_185687192_185689354_185689628_185692698_185692763_185693176_185693229_185696611_185696664_185698298_185698348_185823152_185823214_185823711
H1_mix_00065264	chr3	-	4126	15	NIC	ENSG00000073792.16	novel	4283	16	NA	NA	1	-6	combination_of_known_splicesites	FALSE	canonical	3	9	junction_2	239.065058176255	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTTTAGTGTCTCACTGC	294	False	185825041	-7	True	AATAAA	-12	NA	185825023	185643135	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_185645624_185647024_185647139_185652093_185652169_185657285_185657403_185658340_185658410_185672540_185672670_185675295_185675432_185675790_185675914_185687056_185687192_185689354_185689628_185692698_185692763_185696611_185696664_185698298_185698348_185823152_185823214_185824782
H1_mix_00065270	chr3	-	543	6	NIC	ENSG00000244405.8	novel	642	6	NA	NA	44	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	68.9712983783835	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATATTTCTACAGGTTG	7	True	NA	-12	True	AATAAA	-14	NA	186108506	186095126	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_186095314_186105304_186105356_186105448_186105497_186105624_186105713_186105823_186105943_186108456
H1_mix_00065271	chr3	-	823	5	NNC	ENSG00000197099.8	novel	775	7	NA	NA	1603	1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	11.2583302491977	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTACCTCCATCACTTCT	NA	False	NA	-14	True	AATAAA	-14	NA	186664100	186641508	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_186641624_186641953_186642129_186651193_186651330_186651409_186651495_186663788
H1_mix_00065272	chr3	-	663	3	NNC	ENSG00000197099.8	novel	534	3	NA	NA	1548	7	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_2	1	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCATCACTTCTGCAGTC	NA	False	NA	-8	True	AATAAA	-20	NA	186664155	186641502	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_186641624_186641953_186642129_186663788
H1_mix_00065273	chr3	-	3071	5	FSM	ENSG00000163918.12	ENST00000479307.5	1043	5	-613	-1415	-548	1403	multi-exon	FALSE	canonical	3	794	junction_2	14.6180539060437	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTGGAGCAACTTAAAAATC	NA	False	NA	NA	False	AATACA	-14	NA	186795407	186788476	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_186790407_186791724_186791851_186792489_186792611_186792803_186792948_186794657
H1_mix_00065275	chr3	-	1722	4	NNC	ENSG00000163923.10	novel	749	4	NA	NA	-299	-19924	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	143.657772346489	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAATAAAATCAATCTCC	NA	False	NA	28	True	TTTAAA	-43	NA	187181207	187140871	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_187141178_187142295_187143109_187173615_187173676_187180664
H1_mix_00065276	chr3	-	3808	2	NNC	ENSG00000163923.10	novel	749	4	NA	NA	4	-50629	at_least_one_novel_splicesite	FALSE	canonical	3	103	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAATATTTTCTTGTACC	NA	False	NA	-7	True	AATAAA	-15	NA	187180904	187171576	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_187175145_187180664
H1_mix_00065286	chr3	-	714	2	Intergenic	novelGene_999	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATGTTGAATCACTTTG	762	False	NA	-61	True	AATAAA	-21	NA	191927355	191915205	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_191915541_191926976
H1_mix_00065288	chr3	-	5353	6	FSM	ENSG00000114279.15	ENST00000445105.7	5353	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	26.615784790233	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTTTTCTGAGCTCAG	27	True	NA	3	True	ATTAAA	-17	NA	192727541	192139389	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_192144128_192170457_192170657_192335360_192335465_192360427_192360539_192727180_192727324_192727483
H1_mix_00065291	chr3	-	661	1	FSM	ENSG00000272707.1	ENST00000609789.1	160	1	-500	-1	-500	1	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGTGTTTTTGTTTTTGT	NA	False	NA	-2	True	NA	NA	NA	194638164	194637503	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_194637500_194638200
H1_mix_00065296	chr3	-	1030	5	FSM	ENSG00000114331.16	ENST00000466876.2	1030	5	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	6.57171971404746	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCATGTGTCTGGCATAT	2855	False	NA	NA	False	TATAAA	-23	NA	195294809	195285327	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_195285858_195289120_195289232_195291705_195291816_195292264_195292453_195294718
H1_mix_00065299	chr3	-	1647	18	FSM	ENSG00000114331.16	ENST00000635383.1	1647	18	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_8	52.8941621310259	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTAAATTTGGGCCAGG	3392	False	NA	NA	False	AAAAAG	-37	NA	195442853	195295759	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_195295893_195297189_195297282_195301574_195301645_195301965_195302175_195306510_195306617_195307222_195307324_195308785_195308838_195312946_195312968_195320700_195320814_195326884_195326960_195333027_195333124_195336931_195336977_195342470_195342655_195345258_195345318_195381008_195381063_195381902_195382023_195392089_195392148_195442794
H1_mix_00065301	chr3	-	769	7	FSM	ENSG00000114331.16	ENST00000480906.5	1802	7	0	1033	0	-1033	multi-exon	FALSE	canonical	3	153	junction_2	17.0880074906351	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGACATTAATTGAAATG	-31	True	NA	NA	False	AAAAAG	-23	NA	195443043	195336931	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_195336977_195342470_195342655_195345258_195345318_195381008_195381063_195381902_195382023_195392089_195392148_195442794
H1_mix_00065303	chr3	-	1168	1	NIC	ENSG00000061938.21	novel	2850	7	NA	NA	5159	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTACTTGTGCCTGCCTGTT	7836	False	NA	-3	True	AATAAA	-22	NA	195864531	195863363	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_195863400_195864500
H1_mix_00065304	chr3	-	6085	14	ISM	ENSG00000061938.21	ENST00000673038.1	4276	15	1995	0	1868	0	3prime_fragment	FALSE	canonical	3	9	junction_7	11.1673658116674	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTACTTGTGCCTGCCTGTT	9983	False	NA	-3	True	AATAAA	-22	NA	195890733	195863363	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_195864188_195866888_195867017_195867168_195867265_195867360_195868710_195870113_195870206_195872275_195872471_195878252_195878348_195878445_195878593_195879048_195879176_195882050_195882329_195883156_195883310_195884811_195885034_195886976_195887048_195888425
H1_mix_00065305	chr3	-	638	4	FSM	ENSG00000185485.14	ENST00000354559.9	615	4	0	-23	0	23	multi-exon	FALSE	canonical	3	5	junction_2	34.3737626039914	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATATTTTACTGTTGT	NA	False	NA	8	True	AATAAA	-39	NA	195967895	195963080	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_195963422_195965428_195965578_195967513_195967645_195967878
H1_mix_00065306	chr3	-	558	3	FSM	ENSG00000185485.14	ENST00000457601.1	560	3	2	0	2	0	multi-exon	FALSE	canonical	3	57	junction_1	15	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAACAGATCTAGGGGG	NA	False	NA	NA	False	NA	NA	NA	195975900	195971252	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_195971445_195974396_195974567_195975704
H1_mix_00065307	chr3	-	1404	6	NIC	ENSG00000185485.14	novel	2000	15	NA	NA	37	3265	combination_of_known_splicesites	FALSE	canonical	3	35	junction_5	30.0971759472546	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTTTTTTTCCTTGTCA	67	False	NA	NA	False	AATAAA	-24	NA	195990221	195976479	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_195977252_195979743_195979867_195982161_195982311_195984111_195984277_195985626_195985790_195990189
H1_mix_00065309	chr3	-	4814	18	FSM	ENSG00000072274.13	ENST00000420415.5	4814	18	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_16	139.613703335917	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTCATTTCTTTAGATAA	-3	True	NA	-6	True	AATAAA	-16	NA	196082094	196049283	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_196052185_196053417_196053559_196055079_196055302_196058283_196058366_196058573_196058633_196060179_196060248_196062581_196062646_196062853_196062940_196064308_196064429_196065442_196065601_196067517_196067658_196068031_196068131_196069454_196069569_196071395_196071499_196072002_196072153_196073929_196074126_196077063_196077123_196082042
H1_mix_00065310	chr3	-	5032	19	FSM	ENSG00000072274.13	ENST00000392396.7	5032	19	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_18	137.514095798249	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAATGAGTTCTGTCAT	1	True	NA	NA	False	NA	NA	NA	196082090	196049475	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_196052185_196053417_196053559_196055079_196055302_196058283_196058366_196058573_196058633_196060179_196060248_196062581_196062646_196062853_196062940_196064308_196064429_196065442_196065601_196067517_196067658_196068031_196068131_196069454_196069569_196071395_196071499_196072002_196072153_196073929_196074126_196075158_196075361_196077063_196077123_196081830
H1_mix_00065318	chr3	-	5597	10	FSM	ENSG00000161217.12	ENST00000292823.6	5597	10	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_9	39.0811122325521	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCATGTCCAGTGGTGT	-10	True	NA	-2	True	AATAAA	-21	NA	196287713	196234367	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_196238895_196239546_196239736_196241947_196242091_196242561_196242641_196247366_196247519_196248206_196248324_196257787_196257888_196270414_196270542_196283474_196283539_196287614
H1_mix_00065319	chr3	-	525	4	NIC	ENSG00000213123.11	novel	603	5	NA	NA	6	-6	combination_of_known_splicesites	FALSE	canonical	3	45	junction_1	208.309065253211	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGAATCTGTTGTGTTT	2	True	NA	-8	True	AATAAA	-17	NA	196318208	196291226	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_196291375_196306942_196307013_196316097_196316232_196318035
H1_mix_00065321	chr3	-	1148	2	NNC	ENSG00000163961.4	novel	5347	6	NA	NA	6	-24454	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAATTTGTGGTACTTTTC	0	True	NA	-3	True	AATAAA	-20	NA	196503762	196496213	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_196496472_196502872
H1_mix_00065323	chr3	-	4162	2	FSM	ENSG00000114503.11	ENST00000463783.1	4161	2	0	-1	0	0	multi-exon	FALSE	canonical	3	782	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGTTGCTGCCTGTTTCC	-18	True	NA	-5	True	AATAAA	-16	NA	196942560	196935405	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_196939433_196942425
H1_mix_00065324	chr3	-	2223	4	FSM	ENSG00000114503.11	ENST00000428425.1	2220	4	0	-3	0	0	multi-exon	FALSE	canonical	3	90	junction_3	339.295675710074	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGTTGCTGCCTGTTTCC	529	False	NA	-5	True	AATAAA	-16	NA	196942594	196935405	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_196937083_196937509_196937649_196939250_196939433_196942369
H1_mix_00065328	chr3	-	627	5	FSM	ENSG00000163975.13	ENST00000439320.1	629	5	1	1	1	-1	multi-exon	FALSE	canonical	2	2	junction_1	7.39932429347437	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGCCGTGTAAACCCGC	28	True	NA	NA	False	NA	NA	NA	197029786	197023854	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_197023911_197024302_197024486_197026659_197026760_197027755_197027911_197029653
H1_mix_00065331	chr3	-	4946	25	FSM	ENSG00000075711.21	ENST00000357674.9	4912	25	19	-53	0	0	multi-exon	FALSE	canonical	3	49	junction_24	62.0758944089142	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTTGTTAAGTGATTTT	33	True	NA	0	True	ATTAAA	-25	NA	197298587	197042559	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_197044730_197051576_197051669_197059888_197059999_197065275_197065449_197065707_197065810_197066703_197066755_197069218_197069261_197076585_197076686_197081050_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197149742_197149797_197194424_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197298417
H1_mix_00065332	chr3	-	4840	25	FSM	ENSG00000075711.21	ENST00000655488.1	4840	25	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_8	86.1464253304931	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATTTATATATTAAAATTT	33	True	NA	-40	True	TATAAA	-7	NA	197298587	197042599	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_197044730_197051576_197051669_197059888_197059999_197065275_197065449_197065707_197065810_197066703_197066755_197069218_197069261_197075836_197075871_197081050_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197149742_197149797_197194424_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197298417
H1_mix_00065334	chr3	-	4539	24	FSM	ENSG00000075711.21	ENST00000661336.1	4534	24	0	-5	0	0	multi-exon	FALSE	canonical	3	24	junction_19	76.2003874978364	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAAAATCCATATGTTAAG	8	True	NA	-11	True	AATAAA	-7	NA	197298612	197042937	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_197044730_197051576_197051669_197059888_197059999_197065275_197065449_197065707_197065810_197066703_197066755_197069218_197069261_197076585_197076686_197081050_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197194424_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197298417
H1_mix_00065337	chr3	-	4895	26	NIC	ENSG00000075711.21	novel	5034	26	NA	NA	5	-6	combination_of_known_junctions	FALSE	canonical	3	57	junction_25	68.2559184247051	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGATGCCATTTATATATTA	19	True	NA	-46	True	TATAAA	-1	NA	197298601	197042605	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_197044730_197051576_197051669_197059888_197059999_197065275_197065449_197065707_197065810_197066703_197066755_197069218_197069261_197076585_197076686_197081050_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197149742_197149797_197161639_197161739_197194424_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197298535
H1_mix_00065353	chr3	+	295	1	Intergenic	novelGene_877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTCTGGGCTTAAGGGA	NA	False	NA	NA	False	NA	NA	NA	15374371	15374666	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_15374400_15374700
H1_mix_00065354	chr3	+	220	1	FSM	ENSG00000271943.3	ENST00000684785.1	2409	1	2284	-95	1794	95	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATACTAGGCTTTGGGGTT	2306	False	NA	NA	False	AATAAA	-35	NA	27635225	27635445	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_27635200_27635400
H1_mix_00065355	chr3	+	445	1	Intergenic	novelGene_885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTGGCATAGTCCTGCC	NA	False	NA	NA	False	NA	NA	NA	34640827	34641272	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_34640800_34641300
H1_mix_00065356	chr3	+	264	1	Intergenic	novelGene_888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTCTTCCTGACTGTTAA	NA	False	NA	NA	False	NA	NA	NA	34755610	34755874	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_34755600_34755900
H1_mix_00065357	chr3	+	259	1	Intergenic	novelGene_892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTTACAAGTGACTGGCA	NA	False	NA	NA	False	NA	NA	NA	38719433	38719692	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_38719400_38719700
H1_mix_00065358	chr3	+	2295	1	Intergenic	novelGene_895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATGTAAGGATATGAATA	NA	False	NA	NA	False	AATGAA	-8	NA	44491765	44494060	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_44491800_44494100
H1_mix_00065359	chr3	+	1292	1	FSM	ENSG00000289507.1	ENST00000685341.1	1319	1	19	8	19	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCCAATCTGTATGCCTT	NA	False	NA	NA	False	AATAAA	-16	NA	47349801	47351093	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_47349800_47351100
H1_mix_00065360	chr3	+	784	1	Intergenic	novelGene_904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACACAACAGGCTACGAG	NA	False	NA	NA	False	NA	NA	NA	71351705	71352489	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_71351700_71352500
H1_mix_00065361	chr3	+	331	1	Intergenic	novelGene_912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGAGTATATGGGTTTGG	NA	False	NA	NA	False	NA	NA	NA	78585341	78585672	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_78585300_78585700
H1_mix_00065362	chr3	+	4401	1	Intergenic	novelGene_914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTCTGCTAAAAATACAAAAA	NA	False	NA	NA	False	NA	NA	NA	85321139	85325540	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_85321100_85325500
H1_mix_00065363	chr3	+	229	1	Intergenic	novelGene_920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	104433010	104433239	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_104433000_104433200
H1_mix_00065364	chr3	+	208	1	Intergenic	novelGene_921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTGGTGTGTGGCGAT	NA	False	NA	NA	False	NA	NA	NA	104441417	104441625	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_104441400_104441600
H1_mix_00065366	chr3	+	473	1	Intergenic	novelGene_925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATCAGGAGCTGAAAGAGG	NA	False	NA	NA	False	NA	NA	NA	112696319	112696792	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_112696300_112696800
H1_mix_00065367	chr3	+	1168	1	Intergenic	novelGene_927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTATACTTGTGGGTTA	4064	False	NA	NA	False	NA	NA	NA	115795158	115796326	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_115795200_115796300
H1_mix_00065368	chr3	+	265	1	Intergenic	novelGene_929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTTTGGAAGTTCTTGTGT	5658	False	NA	NA	False	NA	NA	NA	115796752	115797017	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_115796800_115797000
H1_mix_00065369	chr3	+	2846	1	Intergenic	novelGene_930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAATAGTCAGGGAAGCAG	NA	False	NA	NA	False	NA	NA	NA	116105398	116108244	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_116105400_116108200
H1_mix_00065371	chr3	+	654	1	Intergenic	novelGene_931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATCCTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	117099514	117100168	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_117099500_117100200
H1_mix_00065372	chr3	+	249	1	Intergenic	novelGene_932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAATATAAATGGGATCAT	NA	False	NA	NA	False	NA	NA	NA	117808833	117809082	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_117808800_117809100
H1_mix_00065373	chr3	+	892	1	Intergenic	novelGene_939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	125855784	125856676	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_125855800_125856700
H1_mix_00065374	chr3	+	237	1	Intergenic	novelGene_948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTCACTCTGTTGAGTC	NA	False	NA	NA	False	NA	NA	NA	148417906	148418143	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_148417900_148418100
H1_mix_00065375	chr3	+	478	1	Intergenic	novelGene_950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCAGTTATGGAGGCAAG	NA	False	NA	NA	False	NA	NA	NA	153229300	153229778	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_153229300_153229800
H1_mix_00065376	chr3	+	251	1	Intergenic	novelGene_956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACAGAAAATACCATTAACA	NA	False	NA	NA	False	AATAAA	-13	NA	156929165	156929416	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_156929200_156929400
H1_mix_00065378	chr3	+	308	1	Intergenic	novelGene_982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGACGATTCTTTCTAATC	NA	False	NA	NA	False	NA	NA	NA	170221246	170221554	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_170221200_170221600
H1_mix_00065379	chr3	+	1641	1	Intergenic	novelGene_988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCCCCACTCCCCCAACC	1284	False	NA	NA	False	NA	NA	NA	172149806	172151447	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_172149800_172151400
H1_mix_00065381	chr3	+	7943	1	Antisense	novelGene_ENSG00000288895.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGGGAGGAGAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	176311609	176319552	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr3_+_176311600_176319600
H1_mix_00065382	chr3	+	2265	1	Intergenic	novelGene_990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAATTCAGTCGTACAC	NA	False	NA	NA	False	ACTAAA	-27	NA	183078815	183081080	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_183078800_183081100
H1_mix_00065383	chr3	+	602	1	Intergenic	novelGene_996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAGCCATCAATACCCACA	NA	False	NA	NA	False	NA	NA	NA	191668954	191669556	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_191669000_191669600
H1_mix_00065385	chr3	+	358	3	FSM	ENSG00000134121.10	ENST00000461289.2	462	3	0	104	0	95	multi-exon	FALSE	canonical	0	0	junction_1	2.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTACTATAACGGGAAT	46	False	NA	NA	False	AATAAA	-44	NA	319803	328354	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_319868_325958_326065_328166
H1_mix_00065386	chr3	+	4934	23	NNC	ENSG00000144619.15	novel	4980	22	NA	NA	-28749	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	2.85496522680767	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATACTTGTCTTTCGGG	2187	False	NA	7	True	AATAAA	-16	NA	2542591	3057956	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_2542621_2571415_2571559_2736214_2736342_2745521_2745698_2819485_2819582_2866751_2866950_2883144_2883248_2887039_2887225_2900684_2900822_2902875_2903006_2925628_2925780_2988344_2988473_3026101_3026278_3030854_3030976_3034631_3034791_3037178_3037329_3038932_3039004_3040036_3040272_3042309_3042423_3042976_3043164_3043591_3043705_3053806_3053976_3056119
H1_mix_00065387	chr3	+	3073	3	FSM	ENSG00000072756.17	ENST00000339437.11	987	3	-21	-2065	-14	992	multi-exon	FALSE	canonical	3	39	junction_2	118	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CACAAAAAAAAAACACTGGA	NA	False	NA	NA	False	AATAAA	-37	NA	3126918	3132744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_3126991_3129013_3129189_3129918
H1_mix_00065389	chr3	+	2188	3	NIC	ENSG00000170364.13	novel	701	3	NA	NA	-9	0	intron_retention	FALSE	canonical	2	7	junction_1	24.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATAATGATTTAAAATTC	207	False	NA	14	True	AATAAA	-16	NA	4303598	4317265	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_4303869_4312897_4313762_4316211
H1_mix_00065390	chr3	+	440	4	FSM	ENSG00000150995.21	ENST00000649669.1	586	4	31	115	26	-115	multi-exon	FALSE	canonical	2	9	junction_3	2.44948974278318	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAGAAACCGGGGACCTT	27	False	NA	NA	False	NA	NA	NA	4493375	4521049	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_4493606_4494430_4494507_4516475_4516584_4521023
H1_mix_00065391	chr3	+	696	5	ISM	ENSG00000150995.21	ENST00000647673.1	3058	8	5837	3358	-2670	-3358	internal_fragment	FALSE	canonical	3	9	junction_1	1.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGCGGCCTCTCTCTCTG	NA	False	NA	NA	False	NA	NA	NA	4697160	4710473	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_4697273_4699812_4699942_4702829_4702951_4706166_4706352_4710324
H1_mix_00065392	chr3	+	4202	20	FSM	ENSG00000150995.21	ENST00000649694.1	6907	20	2705	0	2705	0	multi-exon	FALSE	canonical	2	4	junction_16	3.85542033090788	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTTTACAAGAGAATCTC	11	False	NA	NA	False	NA	NA	NA	4733087	4847370	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_4733221_4735163_4735355_4766529_4766711_4768510_4768765_4775241_4775443_4777263_4777375_4779549_4779646_4782618_4782742_4783815_4783921_4787946_4788140_4795064_4795188_4800424_4800601_4806102_4806268_4811264_4811461_4813141_4813235_4814422_4814563_4815052_4815219_4818081_4818243_4836773_4836936_4846138
H1_mix_00065393	chr3	+	1942	5	FSM	ENSG00000150995.21	ENST00000649430.1	2042	5	100	0	100	0	multi-exon	FALSE	canonical	2	4	junction_1	6.13901457890434	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTTGTAAATGCATATATA	242	False	NA	NA	False	TTTAAA	-34	NA	4814422	4847451	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_4814563_4815052_4815219_4818081_4818243_4836773_4836936_4846138
H1_mix_00065394	chr3	+	1083	5	FSM	ENSG00000189229.12	ENST00000433639.1	1083	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.29903810567666	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGAGGATGTGTGCCTG	NA	False	NA	NA	False	NA	NA	NA	6490478	6736129	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_6490673_6717568_6717668_6724449_6724547_6732270_6732496_6735661
H1_mix_00065395	chr3	+	1995	10	NNC	ENSG00000134077.16	novel	2390	10	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	120.653569987039	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGGCTCACGACTGTA	11	True	NA	12	True	TTTAAA	-18	NA	9363076	9384870	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_9363313_9365015_9365321_9366907_9366986_9371059_9371537_9374515_9374647_9377818_9377889_9380502_9380619_9383198_9383310_9384211_9384336_9384523
H1_mix_00065396	chr3	+	6934	24	NNC	ENSG00000168137.20	novel	6581	28	NA	NA	0	11281	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	106.998118457743	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTGAGCTTCAAACAACA	2569	False	NA	NA	False	NA	NA	NA	9428822	9490521	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_9429010_9429826_9430052_9433369_9433563_9433844_9433951_9434333_9434486_9434823_9434883_9435727_9435907_9440455_9440699_9441592_9441742_9442127_9442246_9443307_9443418_9445047_9445301_9445656_9445741_9447049_9447308_9447685_9448007_9448387_9448631_9453738_9453869_9464424_9464673_9470458_9470930_9473235_9473538_9474448_9474583_9475067_9475157_9475482_9478137_9490495
H1_mix_00065398	chr3	+	2352	18	NIC	ENSG00000163719.20	novel	2452	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	88	junction_1	169.135497779137	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCACTCTTGTGTCATCA	NA	False	NA	18	True	AATAAA	-18	NA	9649449	9702387	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_9649743_9662266_9662376_9668718_9668795_9669431_9669493_9671047_9671171_9672684_9672759_9677316_9677388_9677983_9678059_9683177_9683245_9684584_9684671_9684887_9684965_9685210_9685248_9687820_9687892_9688695_9688755_9688943_9689083_9689963_9690144_9697710_9697867_9701789
H1_mix_00065400	chr3	+	4964	14	FSM	ENSG00000156983.17	ENST00000684608.1	4952	14	-12	0	-1	0	multi-exon	FALSE	canonical	3	7	junction_6	29.9650684204756	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTGGTACTAAAAAAAAAAAA	-27	True	NA	NA	False	TTTAAA	-45	NA	9731733	9747865	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9732139_9734130_9734740_9738998_9739959_9740778_9740942_9741307_9741440_9742024_9742542_9742943_9743254_9743577_9743902_9744223_9744509_9745007_9745156_9745572_9745710_9745811_9745931_9746299_9746455_9747165
H1_mix_00065401	chr3	+	4299	13	FSM	ENSG00000156983.17	ENST00000433861.6	4304	13	5	0	-1	0	multi-exon	FALSE	canonical	3	18	junction_8	29.2256546357629	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	-27	True	NA	NA	False	NA	NA	NA	9731733	9747873	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9732139_9734130_9734740_9738998_9739959_9740778_9740942_9741307_9741440_9742024_9742154_9742943_9743254_9743577_9743902_9745007_9745156_9745572_9745710_9745811_9745931_9746299_9746455_9747165
H1_mix_00065402	chr3	+	2048	7	FSM	ENSG00000156983.17	ENST00000684573.1	2048	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	40.1068018614743	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGTTCTTGCCCCCTG	NA	False	NA	28	True	AATAAA	-15	NA	9743580	9748015	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9743902_9744223_9744542_9745007_9745156_9745572_9745710_9745811_9745931_9746299_9746455_9747165
H1_mix_00065403	chr3	+	1948	8	FSM	ENSG00000114026.22	ENST00000449570.6	1948	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	82.4670620704449	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCTGCAGTTTAACAAAAT	13	False	NA	NA	False	AAAAAG	-41	NA	9750071	9766540	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9754703_9754886_9756470_9756622_9756766_9756817_9759233_9759287_9765808
H1_mix_00065405	chr3	+	756	6	FSM	ENSG00000214021.17	ENST00000426827.5	756	6	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	8.16333265278342	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCAGCCCTATGCCTGA	284	False	NA	NA	False	AAAAAG	-18	NA	9810246	9817767	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9810395_9810620_9810710_9812942_9813112_9813247_9813346_9816073_9816203_9817644
H1_mix_00065406	chr3	+	1298	2	FSM	ENSG00000171135.15	ENST00000489724.2	1313	2	15	0	15	0	multi-exon	FALSE	canonical	1	2	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGTGTGTTGCTTGAAA	-20	True	NA	64	True	GGGGCT	-12	NA	9890588	9893883	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9890812_9892808
H1_mix_00065407	chr3	+	2307	17	FSM	ENSG00000163702.20	ENST00000416074.6	2342	17	35	0	0	0	multi-exon	FALSE	canonical	2	5	junction_11	22.9420976318644	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGCCCACACGCGTCTC	-19	True	NA	7	True	AATAAA	-23	NA	9917108	9933620	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9917421_9917712_9917735_9917922_9918076_9918334_9918410_9918499_9918610_9920490_9920603_9920924_9920970_9923880_9924021_9924231_9924292_9928165_9928221_9928304_9928487_9929851_9929898_9930027_9930150_9930399_9930460_9930894_9930944_9932607_9932704_9932952
H1_mix_00065411	chr3	+	2175	11	FSM	ENSG00000163703.20	ENST00000684212.1	2175	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	41.6688132780381	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTGTGGTCGCCATTA	354	False	NA	-15	True	NA	NA	NA	9934419	9945370	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076_9943173_9943380_9943516_9943993_9944096_9944364
H1_mix_00065412	chr3	+	240	3	NIC	ENSG00000180385.9	novel	671	4	NA	NA	25	-5	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	16	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGACCGGTTCTTGCAAAT	330	False	NA	17	True	AATAAA	-15	NA	9987239	10006985	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_9987265_9988711_9988748_10006806
H1_mix_00065413	chr3	+	4439	33	NNC	ENSG00000144554.13	novel	5185	44	NA	NA	-2783	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	29.9196188770846	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTCAGTTGCCTCATTTA	NA	False	NA	20	True	AATAAA	-16	NA	10042743	10101930	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_10043151_10043483_10043593_10043828_10043865_10046579_10046724_10047916_10048052_10049373_10049506_10052386_10052498_10060293_10060404_10062153_10062212_10063791_10063912_10064355_10064430_10064728_10064876_10065393_10065495_10065863_10065980_10067208_10067318_10072870_10072982_10073252_10073363_10074529_10074674_10078080_10078198_10081099_10081229_10081345_10081465_10085811_10085923_10087133_10087265_10088448_10088543_10088827_10088951_10090291_10090386_10092180_10092253_10093284_10093324_10094288_10094364_10095199_10095275_10096325_10096473_10098719_10098816_10101187
H1_mix_00065414	chr3	+	4811	3	Fusion	ENSG00000240288.8_ENSG00000231177.4	novel	1708	4	NA	NA	-1625	211	multi-exon	FALSE	canonical	1	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTCCCAGACCACAATGAA	NA	False	NA	NA	False	AATATA	-29	NA	10282793	10293660	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr3_+_10285854_10287944_10288103_10292067
H1_mix_00065415	chr3	+	1871	13	FSM	ENSG00000154743.19	ENST00000454502.6	1909	13	38	0	1	0	multi-exon	FALSE	canonical	0	0	junction_5	36.8823203656651	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATGAAGACTTAAGTTGC	-13	True	NA	21	True	AATAAA	-24	NA	12484480	12533317	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503470_12503646_12503785_12505153_12505232_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
H1_mix_00065417	chr3	+	2051	10	NIC	ENSG00000163517.15	novel	2766	9	NA	NA	12	53	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	25.1415744421884	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGCCTTAGCAGTAGTC	123	False	NA	60	True	NA	NA	NA	13480468	13505387	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_13480774_13481245_13481395_13483463_13483565_13496735_13496853_13498512_13498556_13500712_13500790_13501870_13501934_13502883_13502981_13504093_13504273_13504467
H1_mix_00065419	chr3	+	589	5	FSM	ENSG00000154781.17	ENST00000463438.5	751	5	-2	164	0	-164	multi-exon	FALSE	canonical	3	172	junction_2	11.7260393995586	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATCCTCAGACTTGCGCT	-2	True	NA	NA	False	NA	NA	NA	14651761	14661736	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_14651879_14654425_14654531_14655528_14655630_14658870_14658930_14661529
H1_mix_00065420	chr3	+	1195	10	NIC	ENSG00000154781.17	novel	2940	11	NA	NA	11	0	combination_of_known_splicesites	TRUE	canonical	3	11	junction_7	54.6422709793231	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTGGGCCAGCACAGAGT	20	True	NA	NA	False	NA	NA	NA	14651783	14671027	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_14651879_14654425_14654531_14655528_14655630_14658870_14658930_14661529_14661708_14665027_14665124_14666804_14666948_14668048_14668182_14669933_14670087_14670895
H1_mix_00065421	chr3	+	495	5	FSM	ENSG00000177463.16	ENST00000435454.5	495	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	4.74341649025257	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATCTTTGAACAAAGAGAA	22	False	NA	NA	False	NA	NA	NA	14947704	15004592	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_14947907_14959156_14959197_14959535_14959642_15003875_15003987_15004556
H1_mix_00065422	chr3	+	1485	4	ISM	ENSG00000177463.16	ENST00000478572.1	2767	8	8085	423	-674	-94	3prime_fragment	FALSE	canonical	3	48	junction_2	18.8738502225228	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGCAATGTTTCGATAG	NA	False	NA	NA	False	NA	NA	NA	15033649	15042914	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_15034810_15037999_15038138_15039121_15039228_15042833
H1_mix_00065423	chr3	+	3731	20	NIC	ENSG00000131375.10	novel	4348	21	NA	NA	-49	0	combination_of_known_splicesites	TRUE	canonical	3	71	junction_16	26.8404540255781	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTGCATAGTTTAAGTTA	NA	False	NA	16	True	AATAAA	-17	NA	15206102	15252302	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_15206598_15212103_15212213_15217424_15217583_15218472_15218541_15220780_15220982_15223474_15223562_15227838_15227966_15228973_15229060_15230441_15230536_15232518_15232666_15233866_15233974_15235024_15235146_15240472_15240618_15240753_15240854_15241452_15241589_15242177_15242254_15246731_15246795_15247326_15247458_15250930_15251024_15251115
H1_mix_00065424	chr3	+	1396	4	FSM	ENSG00000169814.16	ENST00000467027.6	1396	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	18.1169043222683	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTAAAGAATGTCTGACGT	-11	True	NA	-14	True	NA	NA	NA	15601763	15642215	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_15602311_15632590_15632867_15635423_15635689_15641907
H1_mix_00065425	chr3	+	1460	1	FSM	ENSG00000272498.1	ENST00000607363.1	564	1	-809	-87	-809	87	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGCCACCAAAAATGTGAA	17	False	NA	NA	False	NA	NA	NA	16338498	16339958	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_16338500_16340000
H1_mix_00065426	chr3	+	551	2	FSM	ENSG00000272529.1	ENST00000606713.1	551	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCATCTCATTATCC	5783	False	NA	NA	False	ATTAAA	-14	NA	16345125	16346440	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_16345244_16346007
H1_mix_00065427	chr3	+	1068	1	FSM	ENSG00000227309.1	ENST00000449897.1	361	1	-532	-175	-532	175	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTGCTGTTGCAAACAGG	NA	False	NA	NA	False	AATAAA	-8	NA	17464617	17465685	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_17464600_17465700
H1_mix_00065428	chr3	+	547	1	FSM	ENSG00000271841.1	ENST00000607194.1	63	1	-498	14	-498	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGGAAAGCCCCGCTATTT	NA	False	NA	NA	False	NA	NA	NA	17664464	17665011	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_17664500_17665000
H1_mix_00065429	chr3	+	252	1	FSM	ENSG00000236570.1	ENST00000421404.1	1227	1	50	925	50	-925	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTCCTCCACAACAACAA	NA	False	NA	NA	False	NA	NA	NA	18538722	18538974	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_18538700_18539000
H1_mix_00065430	chr3	+	214	1	FSM	ENSG00000261734.1	ENST00000566804.1	2314	1	242	1858	242	-1858	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAAATTTAATTTGGCTG	7250	False	NA	NA	False	ATTAAA	-4	NA	20388490	20388704	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_20388500_20388700
H1_mix_00065431	chr3	+	1591	7	NNC	ENSG00000231304.2	novel	1677	8	NA	NA	238393	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7.19760762722973	193	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCACATTGAGGCCCTTG	NA	False	NA	NA	False	NA	NA	NA	20970776	21145954	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_20970857_21034325_21034444_21041249_21041358_21041751_21041893_21042975_21043124_21085294_21085432_21145095
H1_mix_00065432	chr3	+	515	4	NIC	ENSG00000182247.10	novel	1330	5	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	1	3	junction_3	242.792549766714	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGACTTGGAAGGAGC	NA	False	NA	NA	False	NA	NA	NA	23203021	23270988	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_23203263_23208691_23208876_23217261_23217313_23270949
H1_mix_00065437	chr3	+	411	1	FSM	ENSG00000213872.3	ENST00000458542.1	409	1	-36	34	-36	-34	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGCCAGGCTGCACAGCG	NA	False	NA	NA	False	NA	NA	NA	25749451	25749862	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_25749500_25749900
H1_mix_00065438	chr3	+	386	1	FSM	ENSG00000213871.3	ENST00000396646.3	746	1	0	360	0	-360	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCCTTAATTAAAAAGGGAC	NA	False	NA	NA	False	NA	NA	NA	25754924	25755310	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_25754900_25755300
H1_mix_00065439	chr3	+	2132	1	FSM	ENSG00000272282.1	ENST00000606069.1	1096	1	-648	-388	-648	388	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACAAGTACCAGGTTCTT	NA	False	NA	14	True	ATTAAA	-16	NA	27712261	27714393	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_27712300_27714400
H1_mix_00065443	chr3	+	1691	5	FSM	ENSG00000144642.22	ENST00000432518.6	2144	5	453	0	453	0	multi-exon	FALSE	canonical	0	0	junction_2	3.56195171219375	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCTGTCAATTTCCTGC	NA	False	NA	NA	False	AATAAA	-26	NA	28575243	28758340	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_28575376_28576272_28576497_28756757_28756969_28757108_28757242_28757349
H1_mix_00065444	chr3	+	768	1	FSM	ENSG00000213842.2	ENST00000379452.3	992	1	243	-19	243	19	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACACACACACACACAAAAT	326	False	NA	NA	False	AATAAA	-15	NA	32753152	32753920	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_32753200_32753900
H1_mix_00065445	chr3	+	340	1	FSM	ENSG00000227337.1	ENST00000446445.1	471	1	170	-39	170	39	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCTTTTCAGCATAAAAAAA	179	False	NA	NA	False	AATATA	-10	NA	32785815	32786155	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_32785800_32786200
H1_mix_00065446	chr3	+	2775	2	FSM	ENSG00000153558.16	ENST00000464990.1	2775	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTAAGTCAGAGG	NA	False	NA	NA	False	AATAAA	-16	NA	33382551	33386625	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_33384202_33385500
H1_mix_00065448	chr3	+	2452	19	FSM	ENSG00000076242.16	ENST00000435176.5	2428	19	-24	0	4	0	multi-exon	FALSE	canonical	2	10	junction_3	91.8611405100245	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCTTATTTAATTTTAT	-4	True	NA	29	True	AATAAA	-18	NA	36993779	37050844	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_36993891_36996618_36996710_37000954_37001049_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37014431_37014545_37017505_37017600_37020309_37020464_37025636_37026008_37028783_37028933_37040185_37040295_37042267_37042332_37047518_37047684_37048516_37048610_37048903_37049018_37050485
H1_mix_00065452	chr3	+	3730	8	NIC	ENSG00000144677.15	novel	4753	8	NA	NA	29	0	intron_retention	FALSE	canonical	3	21	junction_7	49.3947035085127	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTGTGGATTGACTAC	22	True	NA	19	True	AATAAA	-15	NA	37861908	37984469	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_37862279_37947056_37947212_37964570_37964673_37967825_37967883_37971406_37971500_37975708_37975895_37980741_37980864_37981824
H1_mix_00065453	chr3	+	4514	6	NIC	ENSG00000144677.15	novel	4640	7	NA	NA	-30	0	intron_retention	FALSE	canonical	2	9	junction_1	61.2973082606406	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTTTGTGGATTGACTA	-4	True	NA	18	True	AATAAA	-14	NA	37861929	37984468	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_37862279_37964570_37964673_37967825_37967883_37971406_37971500_37975708_37975895_37980741
H1_mix_00065456	chr3	+	1120	1	FSM	ENSG00000199075.1	ENST00000362205.1	77	1	69	-1112	69	1112	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGTTTCCCCAGATTCA	NA	False	NA	NA	False	NA	NA	NA	37969472	37970592	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_37969500_37970600
H1_mix_00065457	chr3	+	724	5	FSM	ENSG00000136059.16	ENST00000463080.2	831	5	107	0	107	0	multi-exon	FALSE	canonical	3	27	junction_4	4.69041575982343	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACAGGGTTGGGAGGAGA	5181	False	NA	NA	False	NA	NA	NA	37999338	38003313	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_37999440_38001455_38001594_38001701_38001861_38002395_38002576_38003167
H1_mix_00065458	chr3	+	6696	1	ISM	ENSG00000114739.14	ENST00000352511.5	11782	11	32557	0	13001	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTCTTTCTTAATTACG	751	False	NA	9	True	AATAAA	-16	NA	38486446	38493142	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_38486400_38493100
H1_mix_00065459	chr3	+	1303	7	FSM	ENSG00000168026.19	ENST00000479954.5	2426	7	0	1123	0	-1097	multi-exon	FALSE	canonical	0	0	junction_5	1.69967317119759	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATCAATGTTAACTGATAG	2	True	NA	NA	False	NA	NA	NA	39107716	39118534	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_39107865_39109084_39109215_39110028_39110140_39110850_39111018_39112457_39112581_39114584_39114743_39118068
H1_mix_00065460	chr3	+	1768	1	FSM	ENSG00000228168.1	ENST00000424115.1	961	1	-41	-766	-41	766	mono-exon	FALSE	NA	NA	NA	NA	NA	329	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTGGGAGGCTGAGGCA	5168	False	NA	NA	False	AATACA	-41	NA	39334937	39336705	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_39334900_39336700
H1_mix_00065462	chr3	+	671	2	FSM	ENSG00000188846.14	ENST00000465325.1	788	2	0	117	0	-117	multi-exon	FALSE	canonical	3	2270	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTTGTCTTTTCTGAGC	NA	False	NA	NA	False	NA	NA	NA	40457302	40458499	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_40457364_40457889
H1_mix_00065464	chr3	+	533	5	FSM	ENSG00000177842.12	ENST00000420891.5	533	5	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	14.3527000944073	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCTGCCAGGGAATGTTT	NA	False	NA	NA	False	AAGAAA	-26	NA	40505991	40515944	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_40506126_40506303_40506377_40511469_40511597_40512401_40512516_40515859
H1_mix_00065467	chr3	+	5713	17	NNC	ENSG00000182606.17	novel	5536	17	NA	NA	-154	-115	at_least_one_novel_splicesite	TRUE	canonical	3	20	junction_15	40.8113035812384	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGTATTCTGATTTGTA	1	True	NA	20	True	AATAAA	-24	NA	42013647	42225774	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_42014118_42087103_42087401_42125419_42125615_42176813_42176891_42184684_42184802_42188044_42188146_42189015_42189125_42191557_42191637_42193074_42193206_42193823_42193899_42194803_42194942_42199176_42199254_42200817_42201055_42202435_42202753_42209766_42210124_42219493_42219597_42222941
H1_mix_00065468	chr3	+	778	4	FSM	ENSG00000114812.13	ENST00000473575.1	778	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0.942809041582063	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCCACCCTTGCTCAGCA	NA	False	NA	NA	False	NA	NA	NA	42513798	42527899	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_42513855_42519222_42519331_42525886_42525994_42527392
H1_mix_00065469	chr3	+	1244	4	Fusion	ENSG00000008324.12_ENSG00000289558.1	novel	2697	3	NA	NA	-45	173	multi-exon	FALSE	canonical	3	21	junction_1	517.778803050964	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTTTTCTTTATTTGTT	NA	False	NA	NA	False	NA	NA	NA	42582092	42595287	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr3_+_42582236_42590808_42590967_42591524_42591602_42594421
H1_mix_00065470	chr3	+	6457	8	ISM	ENSG00000114857.19	ENST00000232978.13	7265	17	32813	0	-138	0	3prime_fragment	FALSE	canonical	3	95	junction_6	43.6526175665121	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGAGTCTGTTCATGTTT	3298	False	NA	15	True	ATTAAA	-18	NA	42633498	42648735	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_42633736_42634612_42634701_42635220_42635367_42636867_42639751_42642500_42642597_42643338_42643396_42643901_42644004_42645887
H1_mix_00065471	chr3	+	3384	11	FSM	ENSG00000179152.20	ENST00000342649.9	3370	11	-14	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	17.4482090771517	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTTTTTTTCTTGTTA	1	True	NA	6	True	AATAAA	-17	NA	44338751	44409448	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_44338835_44354738_44354812_44357740_44357877_44361364_44361519_44367455_44367709_44392854_44392978_44396399_44396498_44396742_44396835_44400354_44400588_44401202_44401335_44407441
H1_mix_00065472	chr3	+	6064	7	NNC	ENSG00000196345.13	novel	1692	6	NA	NA	0	53	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	14.4067885233162	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCCTGACAACTTCCAAAT	18	True	NA	75	True	GATAAA	-24	NA	44555228	44583536	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_44555482_44556929_44557471_44565486_44565656_44567911_44568004_44568306_44568434_44577304_44581622_44582971
H1_mix_00065473	chr3	+	5571	4	NNC	ENSG00000144792.9	novel	5834	3	NA	NA	0	128	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	14.0554457615387	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATAAAAGAGATTTTA	-8	True	NA	NA	False	AATGAA	-12	NA	44584961	44599822	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_44585008_44586104_44586214_44594013_44595602_44595994
H1_mix_00065474	chr3	+	3153	3	FSM	ENSG00000196653.12	ENST00000449836.5	3173	3	20	0	3	0	multi-exon	FALSE	canonical	0	0	junction_1	12.5	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTTGGTTATTTGGAAC	6	True	NA	18	True	ATTAAA	-20	NA	44712662	44723829	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_44712745_44720202_44720317_44720872
H1_mix_00065475	chr3	+	4873	36	NNC	ENSG00000163808.17	novel	4760	35	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	46.6600384019717	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGTGACTTACATTGTT	14	True	NA	10	True	AATAAA	-21	NA	44761801	44853256	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_44761885_44766019_44766141_44774394_44774438_44775253_44775438_44778114_44778192_44780884_44780923_44784844_44784943_44786394_44786575_44794216_44794427_44797550_44797677_44797833_44797957_44800313_44800438_44801449_44801527_44801764_44801975_44802813_44802992_44805026_44805169_44805844_44805987_44810845_44811044_44812181_44812290_44813074_44813181_44814910_44815077_44826038_44826190_44826374_44826461_44827458_44827529_44828213_44828301_44829970_44830076_44830895_44831019_44838274_44838422_44840354_44840457_44841073_44841239_44843124_44843235_44847984_44848058_44848520_44848559_44851786_44851953_44852207_44852340_44852672
H1_mix_00065476	chr3	+	838	7	FSM	ENSG00000075914.13	ENST00000468667.5	831	7	-7	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	465.85313016968	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCATTTGCTCTCTGCAT	-15	True	NA	NA	False	AAAACA	-43	NA	44976243	45012253	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_44976335_44997086_44997253_45001537_45001609_45005290_45005415_45007419_45007576_45011234_45011394_45012182
H1_mix_00065477	chr3	+	4174	7	ISM	ENSG00000144791.10	ENST00000273317.5	11442	8	-975	10753	-548	1022	5prime_fragment	FALSE	canonical	3	62	junction_1	13.0724477007517	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGTCACAATTAAAACGTT	NA	False	NA	NA	False	ATTAAA	-26	NA	45593775	45675588	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_45596288_45636149_45636252_45665649_45665718_45668293_45668357_45672689_45672821_45673453_45673506_45674342
H1_mix_00065479	chr3	+	2621	1	FSM	ENSG00000268324.2	ENST00000599511.1	2291	1	-363	33	-363	-33	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTGTGTTCTAAATATT	NA	False	NA	NA	False	NA	NA	NA	46557034	46559655	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_46557000_46559700
H1_mix_00065481	chr3	+	2028	5	NNC	ENSG00000181585.7	novel	1634	4	NA	NA	-710	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTTGTGAATAAAGCTGA	25	True	NA	NA	False	NA	NA	NA	46693817	46710853	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_46694130_46694445_46694619_46705789_46705908_46709125_46709276_46709578
H1_mix_00065482	chr3	+	8671	52	NIC	ENSG00000160796.18	novel	8842	54	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	21	junction_44	45.6690112970371	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTCCGTCTCCGAGTGT	-1	True	NA	22	True	AATAAA	-18	NA	46979665	47009701	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_46979913_46988668_46988758_46988841_46988971_46989084_46989167_46989259_46989382_46989510_46989594_46991218_46991305_46991405_46991689_46991839_46991947_46993936_46994021_46994454_46994554_46995031_46995634_46995713_46995847_46995931_46996052_46996270_46996593_46996750_46996834_46996953_46997047_46997258_46997434_46997560_46997695_46998066_46998227_46998462_46998566_46998716_46998880_46998958_46999118_46999314_46999475_46999629_46999716_46999888_47000405_47001000_47001180_47001278_47001439_47001688_47001827_47001919_47002289_47002370_47002521_47002644_47002803_47002956_47003082_47003173_47003310_47003815_47003977_47004076_47004394_47004494_47004591_47004971_47005097_47005180_47005322_47005488_47005620_47005737_47005848_47005945_47006064_47006164_47006263_47006332_47006450_47007240_47007351_47007524_47007698_47007815_47007911_47008069_47008187_47008282_47008442_47008519_47008669_47008988_47009125_47009218
H1_mix_00065483	chr3	+	1030	8	NIC	ENSG00000160796.18	novel	8842	54	NA	NA	101	-4950	combination_of_known_splicesites	FALSE	canonical	2	4	junction_6	33.3894765286481	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGCCTGGTGTTTGAT	42	False	NA	NA	False	NA	NA	NA	46979766	46992746	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_46979913_46988668_46988758_46988841_46988971_46989084_46989167_46989259_46989382_46989510_46989594_46991839_46991947_46992474
H1_mix_00065484	chr3	+	5119	24	FSM	ENSG00000076201.16	ENST00000602307.5	5119	24	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	21.4897874369007	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGTGTCTGAGTCTGCCC	-23	True	NA	24	True	AATAAA	-16	NA	47381010	47413435	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_47381181_47396142_47396218_47405004_47405082_47405748_47405799_47405914_47406047_47406324_47406406_47406480_47406613_47406702_47406751_47407129_47407187_47407308_47407368_47407504_47407585_47407696_47407812_47407889_47407956_47408344_47408491_47408775_47409088_47409162_47409318_47409416_47409569_47409654_47409835_47409927_47411687_47411782_47411968_47412093_47412199_47412282_47412422_47412513_47412628_47412705
H1_mix_00065485	chr3	+	3619	6	NNC	ENSG00000164048.14	novel	3658	6	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	155.800385108638	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGTGTCTGGAGTTTG	-9	True	NA	-26	True	AATGAA	-38	NA	48241062	48270990	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_48241215_48247624_48247678_48256844_48257023_48257928_48257962_48260812_48260940_48267914
H1_mix_00065487	chr3	+	3285	4	NNC	ENSG00000164048.14	novel	1677	4	NA	NA	-37	-7488	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	195.94953998982	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTCAACCTCATCCTTC	-9	True	NA	NA	False	NA	NA	NA	48241062	48279142	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_48241215_48247624_48247678_48260812_48260940_48276189
H1_mix_00065488	chr3	+	421	5	NNC	ENSG00000232112.3	novel	561	4	NA	NA	0	67712	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	6963.2817334932	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGGGGTGCAGTGGCTCAC	-2	True	NA	NA	False	AATAAA	-25	NA	48440256	48511920	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_48440313_48440402_48440459_48440540_48440629_48443847_48444042_48511893
H1_mix_00065489	chr3	+	543	4	NNC	ENSG00000232112.3	novel	561	4	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	3	2614	junction_2	6231.98432817884	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATGGCGTTCTTGTGTG	7	True	NA	14	True	ATTAAA	-14	NA	48440265	48444203	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_48440313_48440402_48440459_48440544_48440629_48443847
H1_mix_00065490	chr3	+	3835	2	FSM	ENSG00000224424.8	ENST00000669166.1	3944	2	-20	129	0	-112	multi-exon	FALSE	canonical	1	3	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAACTATGGATGCAGAGT	-6	True	NA	NA	False	NA	NA	NA	48847933	48851847	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_48848026_48848104
H1_mix_00065492	chr3	+	826	4	FSM	ENSG00000178057.15	ENST00000496152.1	826	4	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_2	33.5360502544153	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGTATCAGGTGTGTTG	1	True	NA	19	True	NA	NA	NA	49022112	49023287	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_49022539_49022701_49022769_49022875_49022977_49023055
H1_mix_00065493	chr3	+	1228	1	FSM	ENSG00000272434.1	ENST00000607245.1	391	1	0	-837	0	837	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATAGGCTGGACTGAG	119	False	NA	NA	False	NA	NA	NA	49029315	49030543	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_49029300_49030500
H1_mix_00065494	chr3	+	797	2	FSM	ENSG00000164061.5	ENST00000467456.1	862	2	0	65	0	-65	multi-exon	FALSE	canonical	2	7	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGTCAGATGCTTTGCT	343	False	NA	NA	False	NA	NA	NA	49643028	49651284	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_49643153_49650611
H1_mix_00065495	chr3	+	940	10	FSM	ENSG00000164062.13	ENST00000442186.5	924	10	-16	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	357.503000073745	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCGGCAGGTGAGGGACGC	-22	True	NA	NA	False	NA	NA	NA	49674350	49678940	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_49674414_49675693_49675788_49675890_49675967_49676055_49676220_49676377_49676516_49676608_49676701_49676776_49676818_49676902_49677025_49677572_49677634_49678851
H1_mix_00065496	chr3	+	2458	21	NIC	ENSG00000164062.13	novel	2879	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	1103	junction_10	90.9123066476701	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTCCTGCTGGTACT	6	True	NA	27	True	AATAAA	-13	NA	49674378	49683503	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_49674622_49675182_49675310_49675693_49675788_49675890_49675967_49676055_49676220_49676377_49676516_49676608_49676701_49676776_49676818_49676902_49677025_49677572_49677634_49678851_49678950_49679592_49679645_49680540_49680630_49681100_49681240_49681721_49681806_49681886_49681968_49682347_49682437_49682545_49682737_49682842_49682946_49683039_49683147_49683236
H1_mix_00065497	chr3	+	3860	26	NIC	ENSG00000164068.16	novel	4255	39	NA	NA	-3	-4873	combination_of_known_junctions	TRUE	canonical	0	0	junction_10	32.385082985844	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTAGCTGTGTTTTTTT	-3	True	NA	5	True	CATAAA	-7	NA	49689553	49707957	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_49689823_49691129_49691248_49691424_49691510_49697142_49697223_49697362_49697458_49697884_49697940_49698051_49698138_49698439_49698527_49698754_49698823_49698979_49699106_49699467_49699583_49699667_49699773_49700226_49700353_49700471_49700565_49700635_49700710_49701490_49701609_49701810_49701911_49702082_49702145_49702333_49702406_49702632_49702754_49703426_49703529_49704649_49704757_49704983_49705183_49705533_49705680_49705981_49706066_49706790
H1_mix_00065498	chr3	+	4496	39	FSM	ENSG00000164068.16	ENST00000457726.5	4506	39	10	0	-3	0	multi-exon	TRUE	canonical	0	0	junction_10	43.2469235771976	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCCTGGCCCTGGCCCTT	-3	True	NA	26	True	ATTAAA	-14	NA	49689553	49721527	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_49689607_49691129_49691248_49691424_49691510_49697142_49697223_49697362_49697458_49697884_49697940_49698051_49698138_49698439_49698527_49698754_49698823_49698979_49699106_49699467_49699583_49699667_49699773_49700226_49700353_49700471_49700565_49700635_49700710_49701490_49701609_49701810_49701911_49702082_49702145_49702333_49702406_49702632_49702754_49703426_49703529_49704649_49704757_49704983_49705187_49705533_49705680_49705981_49706066_49706790_49706899_49712478_49712893_49713512_49713588_49713737_49713826_49713909_49713998_49714089_49714175_49715574_49715715_49715821_49716011_49716101_49716178_49716392_49716478_49720510_49720654_49720799_49720895_49721019_49721106_49721184
H1_mix_00065499	chr3	+	4157	38	NIC	ENSG00000164068.16	novel	4255	39	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	38.4123755015588	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGCCCTGGCCCTTCT	13	True	NA	28	True	ATTAAA	-16	NA	49689569	49721529	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_49689607_49691129_49691248_49697142_49697223_49697362_49697458_49697884_49697940_49698051_49698138_49698439_49698527_49698754_49698823_49698979_49699106_49699467_49699583_49699667_49699773_49700226_49700353_49700471_49700565_49700635_49700710_49701490_49701609_49701810_49701911_49702082_49702145_49702333_49702406_49702632_49702754_49703426_49703529_49704649_49704757_49704983_49705183_49705533_49705680_49705981_49706066_49706790_49706899_49712478_49712657_49713512_49713588_49713737_49713826_49713909_49713998_49714089_49714175_49715574_49715715_49715821_49716011_49716101_49716178_49716392_49716478_49720510_49720654_49720799_49720895_49721019_49721106_49721184
H1_mix_00065500	chr3	+	1054	2	FSM	ENSG00000185614.7	ENST00000333323.6	1033	2	-21	0	-21	0	multi-exon	FALSE	canonical	3	15	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGGCTCCATACCCCT	1	True	NA	NA	False	AATAAA	-17	NA	49803239	49805030	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_49803444_49804180
H1_mix_00065501	chr3	+	2062	16	NIC	ENSG00000004534.15	novel	2260	17	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_3	215.248528192155	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTTTTTGTTATTTTTT	-12	True	NA	17	True	AATAAA	-17	NA	49940143	50077249	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_49940226_49962575_49962686_50048244_50048320_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
H1_mix_00065502	chr3	+	2905	9	FSM	ENSG00000114353.17	ENST00000266027.9	2169	9	-713	-23	-713	0	multi-exon	FALSE	canonical	2	4	junction_1	348.571728629847	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATGGGTATTCTCTCCCA	2987	False	NA	15	True	AATAAA	-28	NA	50230062	50259362	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_50230999_50252099_50252143_50252396_50252539_50253023_50253185_50256191_50256321_50256722_50256853_50256936_50257091_50257499_50257715_50258367
H1_mix_00065503	chr3	+	603	1	FSM	ENSG00000213600.3	ENST00000395152.3	367	1	-376	140	-376	-140	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCACAGTCGAGCTTGAG	3033	False	NA	NA	False	NA	NA	NA	50239241	50239844	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_50239200_50239800
H1_mix_00065504	chr3	+	1493	11	NIC	ENSG00000114735.10	novel	16993	11	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	3	5	junction_2	23.4446155865265	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGTGACCTAATGTTTTG	-12	True	NA	13	True	AGTAAA	-18	NA	50569491	50580674	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_50569575_50570930_50571295_50571709_50571802_50572114_50572209_50577051_50577187_50577508_50577574_50577825_50577876_50578820_50578927_50579843_50579940_50580115_50580230_50580380
H1_mix_00065507	chr3	+	531	3	FSM	ENSG00000164081.13	ENST00000419358.5	531	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	53.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCGCCCTCCCCTGAGCTC	NA	False	NA	NA	False	NA	NA	NA	51662692	51684467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_51662877_51674270_51674563_51684412
H1_mix_00065510	chr3	+	1319	13	FSM	ENSG00000243989.9	ENST00000476854.5	1319	13	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_9	95.443809821975	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACACTCGTGGAGCAAGAA	-55	True	NA	38	True	AATAAA	-38	NA	51983442	51989197	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_51983590_51984046_51984159_51985206_51985272_51985360_51985466_51985851_51985947_51986254_51986332_51986414_51986505_51986604_51986662_51986987_51987062_51987555_51987625_51988523_51988604_51988765_51988827_51988910
H1_mix_00065512	chr3	+	565	2	FSM	ENSG00000114841.18	ENST00000487254.1	565	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCGAAGAAATGAAGTTCTC	NA	False	NA	NA	False	NA	NA	NA	52394596	52395409	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_52395060_52395307
H1_mix_00065516	chr3	+	2826	10	FSM	ENSG00000056736.10	ENST00000475124.1	2822	10	-4	0	-4	0	multi-exon	FALSE	canonical	3	25	junction_4	7.18709405724277	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAAACATCTAGTCTTCC	11	False	NA	-3	True	AATAAA	-9	NA	53846579	53865588	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_53846649_53848663_53848689_53849654_53849796_53851998_53852127_53852870_53852998_53855293_53855342_53856843_53856987_53857615_53858819_53860129_53860229_53864745
H1_mix_00065519	chr3	+	395	1	FSM	ENSG00000229863.1	ENST00000438827.1	582	1	304	-117	304	117	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGGCTCAATCCTGCAAT	332	False	NA	NA	False	AATAAA	-29	NA	57134445	57134840	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_57134400_57134800
H1_mix_00065520	chr3	+	516	8	FSM	ENSG00000157500.12	ENST00000444459.1	516	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	121.408233590945	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAGAAAATGACA	18	True	NA	11	True	AATAGA	-15	NA	57227873	57242892	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_57227938_57230713_57230768_57235565_57235665_57237491_57237552_57238044_57238117_57240464_57240553_57242100_57242143_57242855
H1_mix_00065524	chr3	+	3229	12	FSM	ENSG00000163681.16	ENST00000670768.1	3213	12	-16	0	0	0	multi-exon	FALSE	canonical	3	21	junction_11	57.0408002447545	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCATGTTTGAGTTGAATAT	NA	False	NA	11	True	AATAAA	-19	NA	57864556	57929168	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_57864717_57864806_57864858_57890040_57890101_57896510_57896592_57896872_57896933_57907883_57908007_57909075_57909151_57912380_57912702_57913157_57913276_57916905_57917078_57922888_57923024_57927295
H1_mix_00065527	chr3	+	3928	10	FSM	ENSG00000136068.16	ENST00000683114.1	3961	10	33	0	33	0	multi-exon	FALSE	canonical	3	491	junction_1	51.2986896085617	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTAAAGTTGCCTTGGTG	NA	False	NA	13	True	AATAAA	-9	NA	58149120	58172243	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_58150003_58150104_58150228_58153374_58153642_58154790_58154929_58155959_58156076_58159553_58159687_58163153_58163331_58168439_58168659_58169589_58169794_58170574
H1_mix_00065529	chr3	+	2158	10	NNC	ENSG00000244342.5	novel	1957	9	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	26.5292756994194	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTCGATGTCTGCTT	-2	True	NA	15	True	AATAAA	-17	NA	62950383	63125062	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_62950519_62952006_62952084_62985035_62985120_63102691_63102830_63106302_63106423_63113576_63113767_63118698_63118943_63122255_63122320_63123322_63123449_63124082
H1_mix_00065531	chr3	+	900	1	FSM	ENSG00000244226.1	ENST00000486302.1	1168	1	-614	882	-614	-882	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAATTGAAGAAGTTGGA	NA	False	NA	NA	False	AATAAA	-41	NA	65686686	65687586	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_65686700_65687600
H1_mix_00065532	chr3	+	2329	4	FSM	ENSG00000241316.8	ENST00000464420.6	2336	4	7	0	7	0	multi-exon	FALSE	canonical	1	2	junction_3	2.86744175568088	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCATTGGAAATAAATAAATG	NA	False	NA	NA	False	AGTAAA	-40	NA	67654683	67748463	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_67655103_67669815_67669910_67670881_67671005_67746770
H1_mix_00065533	chr3	+	4626	10	FSM	ENSG00000187098.18	ENST00000314589.10	4670	10	38	6	3	-2	multi-exon	FALSE	canonical	1	1	junction_1	3.68178700572909	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATAGTGGTGGCCTATTG	1	True	NA	1	True	ATTAAA	-14	NA	69866261	69968330	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_69866347_69879133_69879384_69937821_69938050_69939097_69939182_69941235_69941332_69949050_69949169_69951829_69951887_69956454_69956531_69959272_69959421_69964846
H1_mix_00065534	chr3	+	592	1	FSM	ENSG00000266780.1	ENST00000584390.1	74	1	25	-543	25	543	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTGTTGTTCAGAAATA	NA	False	NA	NA	False	NA	NA	NA	75214500	75215092	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_75214500_75215100
H1_mix_00065535	chr3	+	2248	1	FSM	ENSG00000272690.6	ENST00000610109.1	462	1	-165	-1621	-165	-326	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGTCATTGACAATTTCCT	NA	False	NA	NA	False	NA	NA	NA	75452031	75454279	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_75452000_75454300
H1_mix_00065536	chr3	+	1386	2	FSM	ENSG00000272690.6	ENST00000654726.1	569	2	-170	-647	-170	560	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCGTTGCCAGTGCAGAT	NA	False	NA	NA	False	AATAAA	-17	NA	75536926	75538589	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_75537355_75537631
H1_mix_00065537	chr3	+	1344	6	FSM	ENSG00000242516.3	ENST00000463183.2	1344	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	5.56417109729742	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATACCTCTGGGTATA	102	False	NA	30	True	AATAAA	-34	NA	75672390	75679314	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_75672770_75673193_75673239_75673846_75674007_75675763_75675881_75675967_75676129_75678832
H1_mix_00065539	chr3	+	1170	8	NNC	ENSG00000175161.14	novel	1422	10	NA	NA	75563	-73573	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_7	10.6061206818689	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAACATTGGTCACTGTA	NA	False	NA	1	True	AATAAA	-8	NA	85802044	85993210	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_85802197_85883290_85883444_85886189_85886328_85912372_85912544_85935766_85935858_85961468_85961648_85979163_85979284_85993044
H1_mix_00065540	chr3	+	8069	5	ISM	ENSG00000175105.8	ENST00000636215.2	6460	9	67330	0	40265	0	3prime_fragment	FALSE	canonical	3	21	junction_3	2.06155281280883	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTGTTCAATTTTATGT	NA	False	NA	16	True	AATAAA	-17	NA	88126584	88144660	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_88129012_88129686_88129827_88135060_88135203_88138704_88141049_88141644
H1_mix_00065541	chr3	+	1867	1	FSM	ENSG00000242159.1	ENST00000465687.1	1867	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTCTACCCGGGCTCGCA	62	False	NA	NA	False	NA	NA	NA	88317155	88319022	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_88317200_88319000
H1_mix_00065542	chr3	+	3521	13	FSM	ENSG00000169379.17	ENST00000680430.1	3521	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	26.0122834232001	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTTCACACAATAAAAATA	217	False	NA	-23	True	NA	NA	NA	93980423	94055248	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_93980483_93995873_93995945_93996547_93996685_93997079_93997137_93997246_93997302_94003658_94003909_94035330_94035437_94036551_94036755_94039879_94039989_94043014_94043241_94049405_94049523_94050823_94050893_94053186
H1_mix_00065543	chr3	+	2550	2	Genic_Genomic	ENSG00000243547.1	novel	1386	1	NA	NA	-82	1142	multi-exon	TRUE	canonical	0	0	junction_1	0	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCCTGTAGATGTTTTGT	98	False	NA	NA	False	ATTAAA	-17	NA	96349471	96352081	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr3_+_96350927_96350986
H1_mix_00065544	chr3	+	661	3	NNC	ENSG00000289078.1	novel	677	3	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	14	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTTTGGTGAACTCTTC	14	False	NA	22	True	AATAAA	-22	NA	98191371	98196755	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_98191611_98193423_98193499_98196408
H1_mix_00065545	chr3	+	687	2	FSM	ENSG00000289078.1	ENST00000685464.1	602	2	13	-98	13	98	multi-exon	FALSE	canonical	1	4	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACATGGCATTTATTGCAT	14	False	NA	2	True	TATAAA	-13	NA	98191371	98196853	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_98191611_98196405
H1_mix_00065546	chr3	+	237	1	FSM	ENSG00000230301.6	ENST00000642105.1	978	1	657	84	657	-84	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTATTAAATCCCATGAT	NA	False	NA	NA	False	NA	NA	NA	98264941	98265178	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_98264900_98265200
H1_mix_00065547	chr3	+	375	1	FSM	ENSG00000244153.1	ENST00000466609.1	2769	1	1905	489	1905	-489	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAATGGCATTTTTCTCG	NA	False	NA	NA	False	AATATA	-12	NA	98659706	98660081	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_98659700_98660100
H1_mix_00065551	chr3	+	251	2	FSM	ENSG00000144820.8	ENST00000493081.1	561	2	137	173	79	-173	multi-exon	FALSE	canonical	1	1	junction_1	0	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGCACAAATTCAATTTG	65	False	NA	NA	False	NA	NA	NA	100635676	100637402	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_100635827_100637301
H1_mix_00065552	chr3	+	1232	5	FSM	ENSG00000144820.8	ENST00000481506.1	1991	5	798	-39	798	39	multi-exon	FALSE	canonical	1	3	junction_1	0.433012701892219	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGTGGGGATTTGCTTG	NA	False	NA	-42	True	NA	NA	NA	100654993	100695377	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_100655182_100655898_100655996_100659687_100659844_100668948_100669106_100694743
H1_mix_00065553	chr3	+	2059	9	FSM	ENSG00000114354.15	ENST00000674615.1	2037	9	-22	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	384.817732829453	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	6	True	NA	18	True	AATAAA	-15	NA	100709439	100748964	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_100709722_100710970_100711069_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736717_100744832_100744932_100748148
H1_mix_00065554	chr3	+	1089	1	FSM	ENSG00000175841.8	ENST00000487497.1	1089	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACTTTTGTCATCTAAGA	8558	False	NA	NA	False	AAAAAG	-17	NA	101521890	101522979	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_101521900_101523000
H1_mix_00065555	chr3	+	855	1	FSM	ENSG00000244119.2	ENST00000489621.1	720	1	18	-153	18	43	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTTAAATATTTTGGAACT	NA	False	NA	NA	False	NA	NA	NA	101712489	101713344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_101712500_101713300
H1_mix_00065557	chr3	+	7905	9	NIC	ENSG00000144815.17	novel	8074	8	NA	NA	-10	-10	intron_retention	FALSE	canonical	3	24	junction_2	53.7050684293391	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATGTTACAGGACCATT	-11	True	NA	-2	True	AATAAA	-6	NA	101779191	101827382	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_101779325_101779733_101779901_101782109_101782291_101782659_101782781_101785401_101785690_101801234_101801990_101807052_101807127_101816794_101817002_101821403
H1_mix_00065558	chr3	+	407	1	FSM	ENSG00000239997.1	ENST00000496394.1	590	1	-25	208	-25	-208	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAGAATGATTACCGGGGA	NA	False	NA	NA	False	NA	NA	NA	106848645	106849052	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_106848600_106849100
H1_mix_00065559	chr3	+	871	4	FSM	ENSG00000243701.8	ENST00000667620.1	928	4	2	55	0	-7	multi-exon	FALSE	canonical	1	1	junction_2	5.18544972870135	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCAAGCCACTGACTAAT	-1	True	NA	NA	False	ATTAAA	-9	NA	107240691	107251718	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_107241088_107246007_107246053_107248577_107248832_107251542
H1_mix_00065560	chr3	+	2537	1	NIC	ENSG00000243701.8	novel	1477	3	NA	NA	2493	149	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGCCACTACACCCAGC	2476	False	NA	NA	False	NA	NA	NA	107243219	107245756	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_107243200_107245800
H1_mix_00065561	chr3	+	5597	33	NIC	ENSG00000198919.13	novel	5304	33	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	33.8687580734443	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTATTTTATCTGTGTAT	-3	True	NA	5	True	AATAAA	-16	NA	108589685	108694840	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_108590097_108605334_108605439_108608088_108608159_108611173_108611330_108616540_108616658_108624443_108624525_108625844_108625970_108629061_108629177_108632952_108633073_108634870_108634973_108636615_108636709_108637495_108637549_108642437_108642515_108644163_108644782_108646616_108646650_108647942_108648113_108648917_108648963_108651136_108651163_108654144_108654311_108661876_108661973_108662129_108662258_108669680_108669750_108672559_108672657_108674077_108674182_108675785_108675874_108677496_108677599_108684215_108684342_108686444_108686585_108687975_108688097_108688592_108688737_108688822_108688925_108690786_108690904_108693359
H1_mix_00065562	chr3	+	5546	33	NNC	ENSG00000198919.13	novel	5304	33	NA	NA	-19	9	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_29	42.8747152869555	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGTGTATTTCATTATA	-3	True	NA	14	True	AATAAA	-25	NA	108589685	108694849	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_108590097_108605334_108605439_108608088_108608159_108611173_108611330_108616540_108616658_108624443_108624525_108625844_108625970_108629061_108629177_108632952_108633073_108634870_108634973_108636615_108636709_108637495_108637549_108642437_108642515_108644163_108644782_108646616_108646650_108647942_108648113_108648917_108648963_108651136_108651163_108654144_108654311_108661876_108661973_108662129_108662258_108669680_108669750_108672559_108672657_108674077_108674182_108675785_108675874_108677496_108677599_108684215_108684342_108686444_108686585_108687975_108688097_108688652_108688737_108688822_108688925_108690786_108690904_108693359
H1_mix_00065563	chr3	+	5507	33	NNC	ENSG00000198919.13	novel	5304	33	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	35.9704604284891	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTATTTTATCTGTGTAT	11	True	NA	5	True	AATAAA	-16	NA	108589735	108694840	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_108590057_108605334_108605439_108608088_108608159_108611173_108611330_108616540_108616658_108624443_108624525_108625844_108625970_108629061_108629177_108632952_108633073_108634870_108634973_108636615_108636709_108637495_108637549_108642437_108642515_108644163_108644782_108646616_108646650_108647942_108648113_108648917_108648963_108651136_108651163_108654144_108654311_108661876_108661973_108662129_108662258_108669680_108669750_108672559_108672657_108674077_108674182_108675785_108675874_108677496_108677599_108684215_108684342_108686444_108686585_108687975_108688097_108688592_108688737_108688822_108688925_108690786_108690904_108693359
H1_mix_00065564	chr3	+	5216	33	NNC	ENSG00000198919.13	novel	5304	33	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_29	36.0363856921029	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTATTTTATCTGTGTAT	5	True	NA	5	True	AATAAA	-16	NA	108589749	108694840	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_108589840_108605334_108605439_108608088_108608159_108611173_108611330_108616540_108616658_108624443_108624525_108625844_108625970_108629061_108629177_108632952_108633073_108634870_108634973_108636615_108636709_108637495_108637549_108642437_108642515_108644163_108644782_108646616_108646650_108647942_108648113_108648917_108648963_108651136_108651163_108654144_108654311_108661876_108661973_108662129_108662258_108669680_108669750_108672559_108672657_108674077_108674182_108675785_108675874_108677496_108677599_108684215_108684342_108686444_108686585_108687975_108688097_108688652_108688737_108688822_108688925_108690786_108690904_108693359
H1_mix_00065565	chr3	+	1390	3	NNC	ENSG00000289358.1	novel	1307	3	NA	NA	-9	154	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	9	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAAGAGCAAACCCAGCAT	20	False	NA	NA	False	NA	NA	NA	109337761	109380128	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_109337981_109343506_109343651_109379101
H1_mix_00065566	chr3	+	546	3	Fusion	ENSG00000289358.1_ENSG00000228980.4	novel	913	3	NA	NA	9189	-1177	multi-exon	FALSE	canonical	0	0	junction_2	6.5	217	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACCCATTCAAGTCCACA	8351	False	NA	NA	False	NA	NA	NA	109346959	109417840	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr3_+_109347174_109352998_109353223_109417732
H1_mix_00065568	chr3	+	3356	1	FSM	ENSG00000261488.1	ENST00000563632.1	1937	1	-1422	3	-1422	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTATTGCTTGTCCTT	NA	False	NA	NA	False	AATAAA	-13	NA	112132000	112135356	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_112132000_112135400
H1_mix_00065570	chr3	+	4435	20	NIC	ENSG00000144857.15	novel	5750	14	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	3.01886955783158	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTCATGTGTGAGTCAG	77	False	NA	22	True	AATAAA	-28	NA	113212201	113287459	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_113212522_113216186_113216279_113249721_113249900_113250554_113250834_113268298_113268446_113270800_113270945_113272409_113272704_113273068_113273342_113274374_113274683_113278097_113278258_113278672_113278784_113279248_113279456_113279823_113280006_113280557_113280664_113281030_113281154_113283410_113283633_113284334_113284568_113284781_113284859_113285371_113285566_113286674
H1_mix_00065572	chr3	+	740	3	FSM	ENSG00000178075.20	ENST00000491038.1	740	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACACCCTGAATTGAGT	NA	False	NA	NA	False	AATATA	-36	NA	113939725	113945760	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_113939997_113940239_113940346_113945397
H1_mix_00065573	chr3	+	3538	6	NIC	ENSG00000184307.17	novel	3466	7	NA	NA	16	0	intron_retention	FALSE	canonical	0	0	junction_5	17.0950285170865	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGGTGTTTCTTGGAGT	11	False	NA	7	True	AATAAA	-20	NA	113947916	113962982	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_113948191_113948685_113948964_113953699_113954411_113956338_113956507_113958362_113958539_113961051
H1_mix_00065574	chr3	+	3850	7	NIC	ENSG00000184307.17	novel	3466	7	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_5	16.2967276878928	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATAGCTGGTGTTTCTTG	1	True	NA	3	True	AATAAA	-16	NA	113948012	113962978	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_113948191_113948685_113948964_113953699_113954411_113956338_113956507_113958362_113958539_113959520_113959601_113960719
H1_mix_00065576	chr3	+	1476	7	NNC	ENSG00000113845.10	novel	2379	7	NA	NA	-104	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	204.984891042134	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAATTTTACAGTTCGTA	4617	False	NA	14	True	AATAAA	-21	NA	119498442	119524066	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_119498945_119500694_119500861_119503531_119503621_119503953_119504022_119513640_119513720_119517204_119517316_119523605
H1_mix_00065578	chr3	+	1032	4	NIC	ENSG00000113845.10	novel	2379	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	263.789478351372	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAATTTTACAGTTCGTA	-5	True	NA	14	True	AATAAA	-21	NA	119498546	119524066	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_119498928_119513640_119513720_119517204_119517316_119523605
H1_mix_00065579	chr3	+	1276	6	FSM	ENSG00000113845.10	ENST00000264244.7	1271	6	-5	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	206.486222300666	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAATTTTACAGTTCGTA	-5	True	NA	14	True	AATAAA	-21	NA	119498546	119524066	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_119498928_119500694_119500861_119503531_119503621_119503953_119504022_119517204_119517316_119523605
H1_mix_00065582	chr3	+	1201	5	NIC	ENSG00000113845.10	novel	725	6	NA	NA	10	147	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	246.006478573228	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGTTTCATCTAAATAAAC	5	True	NA	NA	False	NA	NA	NA	119498592	119524213	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_119498928_119503953_119504022_119513640_119513720_119517204_119517316_119523605
H1_mix_00065583	chr3	+	2818	6	NIC	ENSG00000113845.10	novel	2379	7	NA	NA	34	0	intron_retention	FALSE	canonical	3	514	junction_2	33.7069725724515	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAATTTTACAGTTCGTA	200	False	NA	14	True	AATAAA	-21	NA	119498850	119524066	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_119500861_119503531_119503621_119503953_119504022_119513640_119513720_119517204_119517316_119523605
H1_mix_00065584	chr3	+	3579	5	NIC	ENSG00000144843.12	novel	3623	5	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	9.01041064547005	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTGCCATTCTTATCA	7	True	NA	9	True	AATAAA	-20	NA	119579601	119589945	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_119579852_119580484_119580637_119582133_119582468_119586284_119586646_119587463
H1_mix_00065585	chr3	+	1746	4	NNC	ENSG00000286735.1	novel	1466	3	NA	NA	40770	41471	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	26.4112770527204	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAATGTTGGGGATGACT	13	False	NA	NA	False	AATAAA	-19	NA	120489743	120551146	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_120490051_120499505_120499580_120549560_120549742_120549962
H1_mix_00065586	chr3	+	2221	1	FSM	ENSG00000244441.1	ENST00000496098.1	339	1	-908	-974	-908	974	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCTTATTCAATTATTCT	NA	False	NA	9	True	AATAAA	-10	NA	120511941	120514162	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_120511900_120514200
H1_mix_00065587	chr3	+	449	3	FSM	ENSG00000153767.10	ENST00000484715.1	543	3	94	0	-1	0	multi-exon	FALSE	canonical	2	2	junction_1	3.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGCTCAAGTTTGATCGG	-9	True	NA	NA	False	NA	NA	NA	120742730	120750700	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_120742795_120749744_120749952_120750522
H1_mix_00065588	chr3	+	560	1	FSM	ENSG00000213371.4	ENST00000462291.1	880	1	393	-73	393	73	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTTTTCGTTTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	120806258	120806818	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_120806300_120806800
H1_mix_00065590	chr3	+	820	3	NNC	ENSG00000145087.13	novel	2321	9	NA	NA	2	-128600	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	8.5	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCTGGATTGGTTAATGT	16	True	NA	NA	False	AATAAA	-23	NA	120908237	120916846	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_120908335_120909570_120909768_120916320
H1_mix_00065591	chr3	+	4424	22	FSM	ENSG00000163406.11	ENST00000489711.6	5447	22	1	1022	1	-1022	multi-exon	FALSE	canonical	0	0	junction_11	2.73550602216097	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCAGAAGAATTGCTTGA	9	True	NA	NA	False	NA	NA	NA	121894401	121943166	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_121894582_121896405_121896494_121897387_121897530_121911573_121911667_121913020_121913121_121915226_121915318_121915615_121915694_121922219_121922303_121922774_121922862_121923039_121923130_121923221_121923267_121924350_121924384_121924944_121925034_121927757_121927840_121928420_121928556_121928981_121929147_121929301_121929349_121930839_121930951_121931638_121931736_121939348_121939496_121940383_121940489_121940830
H1_mix_00065592	chr3	+	529	3	FSM	ENSG00000239523.7	ENST00000687610.1	558	3	18	11	-2	-11	multi-exon	FALSE	canonical	2	8	junction_1	4	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACAATTCCAAGAAGGCAT	16	True	NA	NA	False	AATAAA	-15	NA	123585561	123612406	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_123585802_123611234_123611356_123612238
H1_mix_00065593	chr3	+	739	4	FSM	ENSG00000160145.16	ENST00000454902.1	722	4	-17	0	6	0	multi-exon	FALSE	canonical	2	5	junction_1	3.68178700572909	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGGCCCTGAGAGGCAG	20	False	NA	NA	False	NA	NA	NA	124584664	124650915	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_124584907_124632419_124632704_124633848_124633954_124650807
H1_mix_00065594	chr3	+	2933	15	NIC	ENSG00000160145.16	novel	10888	27	NA	NA	23	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	3.12086461070764	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAAGACTAGTTGACCCT	6	False	NA	NA	False	AATAAA	-28	NA	124584704	124675427	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_124584907_124632419_124632704_124633848_124633954_124650807_124650939_124655600_124655668_124657447_124657552_124657733_124657804_124658430_124658518_124659364_124659458_124660922_124660974_124661850_124661929_124666448_124666635_124667011_124667184_124671659_124671899_124674363
H1_mix_00065595	chr3	+	1984	2	Antisense	novelGene_ENSG00000248787.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGTCTCAAAAAAAAAAAAAA	7735	False	NA	NA	False	NA	NA	NA	125911350	125914133	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr3_+_125911535_125912333
H1_mix_00065597	chr3	+	1961	12	FSM	ENSG00000114626.18	ENST00000453791.6	1961	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	10.3396852422639	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGAGCCTGTGTCCTGGG	-15	True	NA	10	True	AATAAA	-20	NA	127672957	127680920	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_127673082_127674344_127674419_127674544_127674601_127675969_127676115_127676271_127676432_127676535_127676582_127676966_127677084_127677167_127677287_127677464_127677564_127677675_127677844_127679984_127680186_127680268
H1_mix_00065598	chr3	+	723	2	Antisense	novelGene_ENSG00000261159.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4	junction_1	0	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTCACCTGAAAAAGCAGC	NA	False	NA	NA	False	NA	NA	NA	128832214	128865274	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr3_+_128832537_128864873
H1_mix_00065599	chr3	+	2108	3	FSM	ENSG00000177646.20	ENST00000680638.1	4388	3	9	2271	9	-2114	multi-exon	FALSE	canonical	3	221	junction_2	13.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGGCATGTCTTGGGG	6520	False	NA	NA	False	NA	NA	NA	128907870	128910813	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_128909100_128909343_128910150_128910740
H1_mix_00065600	chr3	+	2306	1	FSM	ENSG00000273174.1	ENST00000608909.1	565	1	-1751	10	-1751	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATCTGCATTTCCTCTTT	872	False	NA	NA	False	AATAAA	-8	NA	129121687	129123993	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_129121700_129124000
H1_mix_00065601	chr3	+	2115	2	ISM	ENSG00000206417.8	ENST00000502789.2	922	5	-1911	5898	805	360	5prime_fragment	FALSE	canonical	3	54	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGTAGTTCTT	1088	False	NA	32	True	ATTAAA	-21	NA	129316324	129318671	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_129318311_129318542
H1_mix_00065602	chr3	+	1365	3	NIC	ENSG00000206417.8	novel	917	4	NA	NA	969	360	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	21.5	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGTAGTTCTT	1252	False	NA	32	True	ATTAAA	-21	NA	129316488	129318671	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_129317346_129317931_129318311_129318542
H1_mix_00065605	chr3	+	3272	24	ISM	ENSG00000017260.20	ENST00000428331.6	4795	27	-647	5398	-103	0	5prime_fragment	FALSE	canonical	3	373	junction_1	56.9342140184434	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATATTCACTGGCCAAGC	NA	False	NA	NA	False	NA	NA	NA	130893887	130997752	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_130894776_130930415_130930527_130932021_130932139_130934621_130934712_130937427_130937464_130940629_130940692_130941590_130941700_130953820_130953977_130955011_130955081_130956103_130956180_130959274_130959342_130963970_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605
H1_mix_00065606	chr3	+	3534	28	NIC	ENSG00000017260.20	novel	3439	28	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_27	117.433353833537	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTTTACTGTTCTCTTT	2	True	NA	12	True	ATTAAA	-6	NA	130894084	131016684	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_130894338_130930415_130930527_130932021_130932139_130934621_130934712_130937427_130937464_130940629_130940692_130941590_130941700_130953820_130953977_130955011_130955081_130956103_130956180_130959274_130959342_130963970_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605_130997754_130998293_130998390_130999517_130999660_131001219_131001345_131016151
H1_mix_00065607	chr3	+	281	1	FSM	ENSG00000248530.1	ENST00000508390.1	733	1	82	370	82	-370	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCCTTGGTGGCCCAGCG	NA	False	NA	NA	False	NA	NA	NA	131526528	131526809	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_131526500_131526800
H1_mix_00065608	chr3	+	7707	57	FSM	ENSG00000138246.17	ENST00000650455.1	7707	57	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_29	25.4766549801891	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTAATGAGATATATTTGT	11	False	NA	19	True	AATAAA	-16	NA	132417707	132539021	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_132417761_132434537_132434619_132446474_132446551_132447320_132447471_132447897_132447940_132450646_132450848_132453297_132453505_132453598_132453695_132454065_132454158_132456234_132456402_132456500_132456581_132456662_132456833_132457268_132457369_132460249_132460358_132461049_132461206_132462466_132462524_132463695_132463818_132465950_132466071_132466298_132466395_132467169_132467314_132473144_132473228_132474931_132475086_132477788_132477893_132477980_132478141_132479226_132479290_132480368_132480471_132482225_132482331_132483374_132483578_132484362_132484489_132484587_132484673_132488297_132488453_132488975_132489022_132490896_132491052_132492413_132492616_132494143_132494260_132495087_132495167_132496527_132496664_132499125_132499311_132499733_132499809_132500793_132500914_132502288_132502469_132503213_132503382_132505301_132505416_132507236_132507354_132511066_132511245_132513007_132513100_132514570_132514671_132516421_132516497_132516703_132516817_132522827_132522998_132523156_132523200_132523539_132523714_132525609_132525790_132526140_132526282_132528188_132528333_132530997_132531098_132538175
H1_mix_00065610	chr3	+	3023	5	NIC	ENSG00000091527.17	novel	3351	5	NA	NA	-130	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_4	195.993622345218	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGGACTGTAATGGTTA	9	False	NA	14	True	AATAAA	-15	NA	133573555	133590260	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_133574285_133575038_133575116_133584001_133584151_133586562_133586723_133588352
H1_mix_00065611	chr3	+	3786	5	NIC	ENSG00000091527.17	novel	3351	5	NA	NA	4	-4	combination_of_known_junctions	FALSE	canonical	3	30	junction_4	213.911780881746	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGATTTTGGACTGTAATG	40	False	NA	10	True	AATAAA	-11	NA	133573979	133590256	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_133574285_133575038_133575116_133584001_133584151_133586562_133586723_133587161
H1_mix_00065612	chr3	+	3621	5	FSM	ENSG00000091527.17	ENST00000420115.6	3621	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	254.043672426613	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGGACTGTAATGGTTA	39	False	NA	14	True	AATAAA	-15	NA	133574456	133590260	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_133574593_133575038_133575116_133584001_133584151_133586562_133586723_133587161
H1_mix_00065613	chr3	+	5144	12	FSM	ENSG00000182923.20	ENST00000682822.1	5149	12	5	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	59.5244237669999	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTAAATCTGAGTTAGT	-1	True	NA	NA	False	ATTAAA	-8	NA	134486054	134565022	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_134486203_134495295_134495361_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134561376
H1_mix_00065614	chr3	+	2192	13	NIC	ENSG00000182923.20	novel	5506	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	68.1475115711009	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAATATTGTAAAGAAAAT	-1	True	NA	-18	True	NA	NA	NA	134486054	134574990	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_134486557_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134547334_134547473_134549061_134549177_134550062_134550261_134551925_134552013_134574792
H1_mix_00065616	chr3	+	588	2	FSM	ENSG00000242070.1	ENST00000479221.1	602	2	0	14	0	-14	multi-exon	TRUE	non_canonical	0	0	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATAAAAATAAAACCATCTC	NA	False	NA	NA	False	AAAAAG	-43	NA	137723773	137724529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_137723921_137724088
H1_mix_00065617	chr3	+	2007	1	FSM	ENSG00000168875.3	ENST00000306087.3	2020	1	10	3	10	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTAACCTTTGATGTGCC	15	False	NA	NA	False	AATAAA	-20	NA	137764324	137766331	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_137764300_137766300
H1_mix_00065618	chr3	+	3181	13	FSM	ENSG00000114098.18	ENST00000358441.6	3181	13	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	108.299225399918	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTTTTGTGTGGTAAAG	11	True	NA	NA	False	AATAAA	-24	NA	138187341	138246887	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_138187600_138188400_138188531_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087
H1_mix_00065619	chr3	+	525	3	NNC	ENSG00000158186.13	novel	271	2	NA	NA	2	457	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	13	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGTTTCTTAATGAGCAT	45	False	NA	NA	False	AATAAA	-14	NA	138348908	138373410	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_138349033_138372865_138373077_138373220
H1_mix_00065622	chr3	+	1625	6	FSM	ENSG00000158234.13	ENST00000338446.8	1622	6	-3	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	78.7918777539919	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTTGATTTGTGTTTAT	19	False	NA	NA	False	AATAAA	-15	NA	138608605	138633376	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_138608938_138610603_138611038_138621406_138621540_138622187_138622417_138629106_138629157_138632929
H1_mix_00065624	chr3	+	8237	6	FSM	ENSG00000248932.7	ENST00000660194.1	8237	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	1.74355957741627	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTATTACTGTTAAATTA	9	True	NA	NA	False	NA	NA	NA	139389844	139606642	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_139390238_139423015_139423115_139459930_139459986_139577791_139577851_139583128_139583881_139599763
H1_mix_00065626	chr3	+	4787	10	NIC	ENSG00000114120.14	novel	5809	9	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	2	7	junction_5	130.677815095083	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAAAATATGGCTTTTTC	18	True	NA	-18	True	ATTAAA	-8	NA	140941853	140979931	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_140942096_140956526_140956692_140959462_140959541_140963126_140963228_140966347_140966435_140966999_140967037_140968682_140968731_140970926_140970994_140973715_140974006_140976259
H1_mix_00065627	chr3	+	2385	3	NNC	ENSG00000175093.5	novel	1752	3	NA	NA	-574	-4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	54	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGCTGCGTATTAAATG	NA	False	NA	19	True	AATAAA	-16	NA	141050772	141148606	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_141050846_141065951_141066799_141147141
H1_mix_00065628	chr3	+	2030	2	NIC	ENSG00000175093.5	novel	2963	3	NA	NA	71	-14	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCAGTCCTTCAGCTGC	65	False	NA	9	True	AATAAA	-6	NA	141051417	141148596	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_141051993_141147141
H1_mix_00065629	chr3	+	742	4	FSM	ENSG00000177311.12	ENST00000504673.5	590	4	-152	0	-131	0	multi-exon	FALSE	canonical	0	0	junction_2	14.7044966667418	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTCGTTGTCAAGAGACA	2207	False	NA	NA	False	NA	NA	NA	141402217	141442670	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_141402450_141403926_141404032_141438242_141438366_141442388
H1_mix_00065630	chr3	+	649	3	FSM	ENSG00000177311.12	ENST00000513570.1	649	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	11	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCACGTCCTGGAGCTGG	75	False	NA	NA	False	TTTAAA	-33	NA	141402817	141442597	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_141403153_141403926_141404032_141442388
H1_mix_00065631	chr3	+	399	2	FSM	ENSG00000177311.12	ENST00000509813.1	855	2	456	0	456	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCTGGGAATATCGTTC	-1	True	NA	NA	False	NA	NA	NA	141432178	141442722	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_141432244_141442388
H1_mix_00065634	chr3	+	1426	3	FSM	ENSG00000241570.8	ENST00000608349.5	280	3	8	-1154	8	842	multi-exon	FALSE	canonical	1	1	junction_1	3	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTTCATGTTAAGTCT	107	False	NA	NA	False	AATAAA	-43	NA	142964065	142965966	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_142964099_142964464_142964637_142964745
H1_mix_00065635	chr3	+	551	6	FSM	ENSG00000163714.18	ENST00000465175.2	571	6	20	0	20	0	multi-exon	FALSE	canonical	1	4	junction_1	351.263206157434	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAAGATTTGCAGATCAAA	650	False	NA	NA	False	AAAAAG	-22	NA	143002247	143016887	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_143002362_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841
H1_mix_00065638	chr3	+	407	1	FSM	ENSG00000241143.1	ENST00000487963.1	407	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGACAGCTCATGTACACAT	NA	False	NA	NA	False	AAGAAA	-7	NA	150150537	150150944	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_150150500_150150900
H1_mix_00065639	chr3	+	228	1	FSM	ENSG00000278234.1	ENST00000622185.1	84	1	-149	5	-149	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTATTGGTACCTGTGGCT	NA	False	NA	NA	False	TTTAAA	-22	NA	150241627	150241855	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_150241600_150241900
H1_mix_00065641	chr3	+	3974	6	FSM	ENSG00000198843.14	ENST00000485923.1	1078	6	-59	-2837	-14	306	multi-exon	FALSE	canonical	2	9	junction_1	380.413985021581	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCCCAACCTGCAGAATT	NA	False	NA	NA	False	NA	NA	NA	150603276	150630742	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_150603687_150622384_150622496_150623042_150623170_150624811_150624900_150627009_150627164_150627658
H1_mix_00065642	chr3	+	3882	7	FSM	ENSG00000198843.14	ENST00000492132.1	819	7	-51	-3012	-14	306	multi-exon	FALSE	canonical	1	1	junction_2	448.843482989585	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCCCAACCTGCAGAATT	NA	False	NA	NA	False	NA	NA	NA	150603276	150630742	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_150603500_150618708_150618804_150622384_150622496_150623042_150623170_150624811_150624900_150627009_150627164_150627658
H1_mix_00065643	chr3	+	668	4	FSM	ENSG00000240137.7	ENST00000475393.2	671	4	3	0	3	0	multi-exon	FALSE	canonical	2	2	junction_1	12.684198393627	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTTTAATGGACTCACAG	2	True	NA	20	True	AATAAA	-34	NA	150704005	150720156	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_150704063_150706926_150707172_150707931_150708010_150719868
H1_mix_00065644	chr3	+	1661	3	FSM	ENSG00000240137.7	ENST00000655051.1	3626	3	1965	0	-1040	0	multi-exon	FALSE	canonical	3	24	junction_1	4	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATTGGATTAAATGATTT	2923	False	NA	NA	False	NA	NA	NA	150706926	150721206	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_150707172_150707931_150708010_150719868
H1_mix_00065645	chr3	+	10601	43	NNC	ENSG00000144893.13	novel	10794	45	NA	NA	-15	23	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_38	5.06717908257398	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATTTCATGTCAGATTA	-15	True	NA	28	True	AATAAA	-24	NA	151085681	151436676	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_151085937_151086797_151087026_151116337_151116443_151122782_151122975_151127824_151127985_151156160_151156331_151158688_151158800_151159831_151160102_151163892_151164043_151165419_151165520_151165845_151165983_151185329_151185462_151188353_151188481_151190716_151190932_151193489_151193667_151350058_151350207_151355120_151355240_151355895_151356040_151357212_151357377_151360473_151360606_151364981_151365207_151365849_151365992_151367645_151367767_151368149_151368252_151369435_151369550_151372566_151372767_151376025_151376215_151376799_151376875_151376990_151377179_151378011_151378174_151380112_151380225_151382655_151382746_151383778_151383889_151384082_151384219_151385029_151385192_151387809_151388173_151389978_151390136_151394655_151394868_151411277_151411508_151413138_151413296_151416311_151416423_151430298_151430381_151432751
H1_mix_00065646	chr3	+	5092	9	FSM	ENSG00000152601.18	ENST00000463374.5	5092	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	4.35889894354067	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCGTGTATCTGAGATTG	102	False	NA	30	True	AATAAA	-38	NA	152299682	152465780	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_152300368_152414940_152415112_152432716_152432921_152445281_152445540_152446703_152446758_152447619_152447774_152456266_152456362_152459270_152459346_152462384
H1_mix_00065648	chr3	+	3590	23	FSM	ENSG00000196549.13	ENST00000462745.5	3590	23	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	27.7308492477241	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTGCTCCCTAAGACTG	-1	True	NA	23	True	AATAAA	-14	NA	155080093	155181584	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_155080296_155084157_155084328_155085058_155085095_155114993_155115156_155116478_155116560_155116663_155116760_155116867_155116987_155118745_155118812_155138101_155138237_155140190_155140293_155141990_155142128_155142236_155142331_155143442_155143572_155144358_155144458_155147143_155147225_155148549_155148654_155160389_155160449_155166901_155167022_155168491_155168626_155168731_155168798_155172116_155172213_155172535_155172613_155180359
H1_mix_00065649	chr3	+	1804	7	ISM	ENSG00000196549.13	ENST00000680282.1	5607	23	76446	2093	0	27	3prime_fragment	FALSE	canonical	3	114	junction_4	6.39444203108363	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTAACTTTAGAAGTGCA	NA	False	NA	50	True	AATAAA	-41	NA	155160389	155181611	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_155160449_155166901_155167022_155168491_155168626_155168731_155168798_155172116_155172213_155172535_155172613_155180359
H1_mix_00065651	chr3	+	977	2	FSM	ENSG00000288032.1	ENST00000663782.1	979	2	2	0	2	0	multi-exon	FALSE	canonical	1	2	junction_1	0	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACAACCAGTTTCCTCAC	8801	False	NA	NA	False	NA	NA	NA	155886616	155890729	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_155887532_155890667
H1_mix_00065652	chr3	+	1826	3	FSM	ENSG00000163661.4	ENST00000295927.4	1884	3	15	43	15	-43	multi-exon	FALSE	canonical	2	3	junction_2	0.5	295	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACGTCATTTAATTATAAA	15	False	NA	6	True	AATAAA	-19	NA	157436864	157443590	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_157437064_157437512_157437915_157442365
H1_mix_00065654	chr3	+	1605	10	FSM	ENSG00000174891.14	ENST00000476899.6	1607	10	2	0	2	0	multi-exon	FALSE	canonical	0	0	junction_7	34.6435107849388	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACCCTAAACAATGTAAGC	-19	True	NA	-92	True	AATAAA	-3	NA	158110078	158544734	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_158110212_158122102_158122299_158123865_158123992_158203071_158203246_158298038_158298076_158354856_158354909_158460934_158461010_158537091_158537199_158543334_158543488_158544182
H1_mix_00065655	chr3	+	1741	10	NIC	ENSG00000174891.14	novel	2746	9	NA	NA	36	-8	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	31.947874212014	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGATCAGCTTCTACTAGA	24	True	NA	1	True	AATAAA	-16	NA	158110422	158544827	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_158110605_158122102_158122299_158123865_158123992_158203071_158203246_158298038_158298076_158354856_158354909_158460934_158461004_158537091_158537199_158543334_158543488_158544182
H1_mix_00065656	chr3	+	994	6	FSM	ENSG00000178053.20	ENST00000491767.6	992	6	-2	0	-2	0	multi-exon	FALSE	canonical	2	6	junction_1	269.105629818479	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAGTAAATTGAGTCTAT	-1	True	NA	8	True	AATAAA	-18	NA	158571160	158605397	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_158571348_158596861_158596946_158598079_158598209_158600013_158600174_158602806_158602940_158605096
H1_mix_00065657	chr3	+	662	3	FSM	ENSG00000168827.15	ENST00000477721.1	739	3	7	70	7	-70	multi-exon	FALSE	canonical	3	299	junction_2	13.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGAATGTGTCATTTT	NA	False	NA	NA	False	NA	NA	NA	158681994	158690516	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_158682158_158684523_158684669_158690162
H1_mix_00065658	chr3	+	2115	8	NNC	ENSG00000283154.3	novel	600	4	NA	NA	-559	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	46.4204388481749	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCATATGTCTTTTTGCTC	NA	False	NA	15	True	AATAAA	-19	NA	159763153	159897359	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_159763283_159764442_159765139_159866162_159866282_159886206_159886325_159887707_159887906_159888819_159888944_159892096_159892191_159896722
H1_mix_00065660	chr3	+	1091	1	FSM	ENSG00000244009.1	ENST00000471720.1	806	1	-131	-154	-131	154	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCATCTCTCCCCCAGCCT	NA	False	NA	NA	False	NA	NA	NA	160452466	160453557	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_160452500_160453600
H1_mix_00065662	chr3	+	1203	6	Antisense	novelGene_ENSG00000114204.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	6.34350061086148	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTCATCTCATTTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	167422745	167474772	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr3_+_167422992_167433569_167433768_167467077_167467197_167469458_167469641_167471064_167471122_167474371
H1_mix_00065663	chr3	+	742	7	FSM	ENSG00000206120.11	ENST00000506760.2	742	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.28521820013368	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGGAGGCTACAAATGCAG	NA	False	NA	NA	False	NA	NA	NA	168519606	168807584	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_168519641_168645249_168645373_168709263_168709387_168792201_168792322_168794014_168794163_168802900_168803039_168807528
H1_mix_00065664	chr3	+	2680	8	NIC	ENSG00000085274.16	novel	2833	9	NA	NA	-572	-630	combination_of_known_splicesites	FALSE	canonical	3	57	junction_6	75.2820546684404	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGCTTTTTAAGTAATGAA	-2	True	NA	63	True	NA	NA	NA	169772823	169786872	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_169773463_169774030_169774098_169774264_169774562_169778767_169779562_169780589_169780750_169782464_169782644_169784621_169784709_169786415
H1_mix_00065665	chr3	+	328	2	FSM	ENSG00000163558.13	ENST00000488541.1	332	2	4	0	4	0	multi-exon	FALSE	canonical	3	869	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTTGCTTTCAGACAGAA	9551	False	NA	NA	False	NA	NA	NA	170280148	170281238	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_170280404_170281165
H1_mix_00065668	chr3	+	229	2	FSM	ENSG00000240497.3	ENST00000467896.2	229	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAGCATGGTCCCTGGA	7183	False	NA	-66	True	NA	NA	NA	171468083	171469633	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_171468256_171469576
H1_mix_00065669	chr3	+	613	1	FSM	ENSG00000243398.3	ENST00000484215.3	266	1	-267	-80	-267	80	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGGGGACTTTTTGTTC	8237	False	NA	NA	False	CATAAA	-18	NA	172237058	172237671	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_172237100_172237700
H1_mix_00065670	chr3	+	4422	26	NIC	ENSG00000114346.14	novel	4136	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_2	135.206366713998	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGTCTCATGTATTAA	9	True	NA	19	True	AATAAA	-20	NA	172750762	172821474	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_172750858_172752149_172752473_172754508_172754661_172755294_172755375_172755482_172755576_172756982_172757166_172758979_172759070_172760155_172760264_172761609_172761684_172762415_172762547_172762690_172762807_172762909_172762973_172764277_172764501_172769006_172769144_172773902_172774023_172782162_172782232_172783798_172783910_172784706_172784804_172786492_172786575_172802615_172802695_172802860_172802981_172805730_172805870_172807769_172807925_172815603_172815712_172816690_172816838_172820147
H1_mix_00065672	chr3	+	288	4	FSM	ENSG00000177694.16	ENST00000489729.5	284	4	-4	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGACCTAATTATTTTAA	6	True	NA	NA	False	NA	NA	NA	174440982	174737746	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_174441033_174536620_174536684_174550568_174550638_174737640
H1_mix_00065674	chr3	+	4273	8	NIC	ENSG00000121864.10	novel	1228	7	NA	NA	0	1924	combination_of_known_junctions	FALSE	canonical	2	17	junction_6	105.797457629266	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAACAAATGTTTCTCAGA	47	True	NA	NA	False	NA	NA	NA	179323075	179336536	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_+_179323292_179325041_179325323_179327560_179327632_179328282_179328352_179329617_179329729_179329933_179330056_179332988_179333124_179333268
H1_mix_00065676	chr3	+	543	5	FSM	ENSG00000171109.19	ENST00000489329.5	543	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	35.387144558441	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGCTTTAGAAGCACAGAA	280	False	NA	NA	False	NA	NA	NA	179359719	179367498	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_179359861_179362357_179362483_179364296_179364406_179365117_179365226_179367438
H1_mix_00065677	chr3	+	951	5	FSM	ENSG00000136521.13	ENST00000611971.4	951	5	0	0	0	0	multi-exon	FALSE	canonical	2	37	junction_4	355.529534638123	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATGCTTTCATGGTTTTT	-14	True	NA	13	True	AATAAA	-31	NA	179604786	179624499	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_179604940_179614970_179615060_179615982_179616050_179616982_179617045_179623919
H1_mix_00065678	chr3	+	2764	13	NNC	ENSG00000163728.11	novel	2274	13	NA	NA	-6	501	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_10	23.4039111166394	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGGAATCTGCAAAGATT	11	True	NA	9	True	AATAAA	-17	NA	180602204	180618329	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_180602423_180602890_180603016_180603123_180603324_180604224_180604310_180604477_180604608_180604851_180605008_180605765_180605838_180606252_180606373_180606480_180606604_180607647_180607766_180608717_180608811_180609629_180610004_180617379
H1_mix_00065680	chr3	+	2131	6	FSM	ENSG00000114416.18	ENST00000476672.1	976	6	0	-1155	0	0	multi-exon	FALSE	canonical	3	648	junction_3	42.1445132846495	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATTTCCTGTGTACAGA	9966	False	NA	-64	True	AAGAAA	-33	NA	180957868	180971816	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_180957929_180961467_180961555_180962882_180962941_180963027_180963091_180968050_180968255_180970157
H1_mix_00065682	chr3	+	4493	29	ISM	ENSG00000058063.16	ENST00000323116.10	7315	30	-29	6879	-28	-499	5prime_fragment	TRUE	canonical	3	89	junction_9	16.8862868527533	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAACTTGCAATGGATTT	4	True	NA	NA	False	TTTAAA	-6	NA	182793474	182914750	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_+_182793787_182820259_182820377_182828119_182828210_182829671_182829753_182836034_182836143_182836341_182836471_182837070_182837175_182842074_182842123_182845457_182845523_182848475_182848558_182857877_182858029_182859161_182859360_182865455_182865699_182866267_182866444_182867375_182867445_182869077_182869152_182869227_182869332_182872355_182872538_182873811_182874016_182879495_182879650_182880878_182880982_182884752_182884899_182885950_182886011_182887585_182887714_182889409_182889549_182896699_182896766_182897302_182897407_182898606_182898773_182913860
H1_mix_00065684	chr3	+	6522	31	NNC	ENSG00000163872.16	novel	6526	31	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_10	29.9897019362017	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGGTGTTTCTGAGTTTG	-13	True	NA	30	True	AATAAA	-16	NA	183697802	183812623	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_+_183697994_183715143_183715263_183717650_183717749_183718499_183718593_183721890_183722137_183724418_183724532_183728689_183728852_183736717_183736830_183747671_183747717_183752072_183752254_183754122_183754366_183756527_183756690_183758861_183758966_183761506_183761615_183762096_183762280_183772304_183772564_183773632_183773795_183775914_183776124_183777541_183777701_183786124_183786302_183790796_183790981_183797922_183798052_183798890_183798990_183800465_183800569_183801454_183801529_183803255_183803336_183803986_183804189_183806865_183807093_183808029_183808105_183809096_183809171_183810474
H1_mix_00065688	chr3	+	2860	20	FSM	ENSG00000161204.12	ENST00000473311.5	2844	20	-16	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	125.887189529096	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCATGTCTGCTGCTCCCT	-22	True	NA	25	True	ATTAAA	-22	NA	184186159	184194012	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_184186281_184186506_184186876_184187396_184187762_184187860_184187984_184188140_184188408_184188663_184188671_184188760_184188842_184188928_184188989_184189087_184189145_184189254_184189278_184189387_184189444_184189556_184189758_184189854_184189932_184190998_184191044_184191122_184191256_184192600_184192690_184192804_184192897_184193101_184193235_184193364_184193453_184193539
H1_mix_00065701	chr3	+	5333	4	FSM	ENSG00000156976.17	ENST00000485101.5	5327	4	-6	0	0	0	multi-exon	FALSE	canonical	3	1463	junction_1	215.74213002255	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTGCTTTTGGTCATTT	-7	True	NA	27	True	AATAAA	-16	NA	186783571	186789894	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_+_186783640_186784431_186784478_186784563_186786052_186786163
H1_mix_00065721	chr3	-	1938	12	NNC	ENSG00000125046.16	novel	1799	12	NA	NA	-2418	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	6.70142454326622	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTACTGCCCATTCTGT	8663	False	NA	-13	True	AATAAA	-26	NA	8636133	8619399	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_8620015_8623548_8623657_8625541_8625648_8626228_8626322_8627697_8627784_8629663_8629727_8630804_8630930_8632048_8632110_8633665_8633996_8635299_8635382_8635758_8635858_8635963
H1_mix_00065722	chr3	-	4284	13	Fusion	ENSG00000070950.10_ENSG00000180914.11	novel	581	6	NA	NA	3	0	multi-exon	FALSE	canonical	2	9	junction_1	40.3039665817426	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAGCTTGATGGATGAAT	17	True	NA	-4	True	AATAAA	-38	NA	8963440	8750380	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr3_-_8753225_8890388_8890452_8898893_8899048_8902379_8902521_8912311_8912373_8913643_8913721_8935870_8936056_8939553_8939654_8941466_8941805_8947219_8947291_8948508_8948571_8958919_8959002_8963334
H1_mix_00065723	chr3	-	3095	4	FSM	ENSG00000206573.10	ENST00000654392.1	3095	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	12.3558353285671	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGTAACTCATTAACAAAC	2106	False	NA	NA	False	NA	NA	NA	9396683	9387433	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9389797_9390289_9390498_9391426_9391827_9396559
H1_mix_00065725	chr3	-	724	3	NNC	ENSG00000206573.10	novel	1809	3	NA	NA	-181	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTTTTCATTTAAGAA	-9	True	NA	-11	True	AATAAA	-19	NA	9398760	9390009	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_9390498_9391704_9391827_9398646
H1_mix_00065727	chr3	-	1073	2	NNC	ENSG00000156959.9	novel	302	2	NA	NA	0	689	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	0	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGCTTGGACTTTTAAT	62	False	NA	0	True	AAAAAG	-22	NA	9553795	9551882	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_9552845_9553684
H1_mix_00065728	chr3	-	1799	5	FSM	ENSG00000171148.14	ENST00000492103.1	1868	5	69	0	69	0	multi-exon	FALSE	canonical	3	293	junction_3	37.8615900352851	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCCAGTCTTTGAATGTC	4973	False	NA	-4	True	AATAAA	-27	NA	9788014	9779966	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9780550_9784027_9784214_9785315_9785426_9787005_9787110_9787198
H1_mix_00065729	chr3	-	1109	8	NIC	ENSG00000156990.14	novel	1225	9	NA	NA	2	47	combination_of_known_junctions	FALSE	canonical	3	79	junction_1	208.731836555511	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCTTACTGCTGAGTTG	12	True	NA	-14	True	AGTAAA	-14	NA	9843993	9837801	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_9838208_9840183_9840308_9840531_9840617_9840697_9840806_9841982_9842083_9842198_9842244_9843464_9843602_9843889
H1_mix_00065730	chr3	-	1225	8	FSM	ENSG00000156990.14	ENST00000433535.6	1178	8	0	-47	0	47	multi-exon	FALSE	canonical	0	0	junction_6	206.463318874846	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCTTACTGCTGAGTTG	-9	True	NA	-14	True	AGTAAA	-14	NA	9844014	9837801	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_9838208_9839031_9839172_9840183_9840308_9840531_9840617_9840697_9840806_9841982_9842083_9843464_9843602_9843889
H1_mix_00065731	chr3	-	357	2	FSM	ENSG00000206567.10	ENST00000621000.1	357	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACACAGGCAGACGGGAC	2716	False	NA	NA	False	NA	NA	NA	10008480	10007343	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_10007624_10008403
H1_mix_00065732	chr3	-	481	3	FSM	ENSG00000206567.10	ENST00000454232.1	598	3	117	0	3	0	multi-exon	FALSE	canonical	1	1	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGCCCAGCAGAACAAGT	13	True	NA	NA	False	AAGAAA	-39	NA	10011092	10007461	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_10007624_10008403_10008653_10011022
H1_mix_00065733	chr3	-	1998	10	NIC	ENSG00000157020.18	novel	1479	10	NA	NA	9	0	intron_retention	FALSE	canonical	2	3	junction_9	413.691511475238	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCTGCGTTATCCTAA	6634	False	NA	-22	True	AATAAA	-17	NA	10321032	10300930	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_10301375_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10319138_10319317_10320508
H1_mix_00065734	chr3	-	1897	10	NIC	ENSG00000157020.18	novel	1479	10	NA	NA	8	0	intron_retention	FALSE	canonical	1	2	junction_9	413.907784803557	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCTGCGTTATCCTAA	6633	False	NA	-22	True	AATAAA	-17	NA	10321033	10300930	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_10301375_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10319138_10319317_10320610
H1_mix_00065736	chr3	-	1746	9	NIC	ENSG00000157020.18	novel	1467	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_8	340.101432480076	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCTGCGTTATCCTAA	28	True	NA	-22	True	AATAAA	-17	NA	10321060	10300930	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_10301375_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10320610
H1_mix_00065737	chr3	-	1856	9	NIC	ENSG00000157020.18	novel	1467	9	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_8	318.769117073784	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCTGCGTTATCCTAA	20	True	NA	-22	True	AATAAA	-17	NA	10321068	10300930	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_10301375_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10320508
H1_mix_00065739	chr3	-	596	1	FSM	ENSG00000274514.1	ENST00000621376.1	277	1	-346	27	-346	-27	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAACAGAGTGAGACCC	NA	False	NA	NA	False	NA	NA	NA	12577583	12576987	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_12577000_12577600
H1_mix_00065742	chr3	-	794	1	FSM	ENSG00000272263.1	ENST00000606447.1	510	1	-209	-75	-209	75	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAATGATTCCCATCCTTA	8620	False	NA	81	True	AAAACA	-14	NA	12832937	12832143	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_12832100_12832900
H1_mix_00065743	chr3	-	571	4	FSM	ENSG00000144713.13	ENST00000273223.10	567	4	0	-4	0	4	multi-exon	FALSE	canonical	1	3	junction_2	5990.4395683641	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTTCCTTCCTTGATTT	11	True	NA	-22	True	AATAAA	-19	NA	12841546	12836042	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_12836224_12839348_12839585_12840141_12840243_12841493
H1_mix_00065745	chr3	-	3260	21	NNC	ENSG00000132182.12	novel	3134	20	NA	NA	40	3195	at_least_one_novel_splicesite	FALSE	non_canonical	2	4	junction_1	57.279053763134	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGTGTACAGTGCCAG	-7	True	NA	NA	False	AATAAA	-42	NA	13420269	13348465	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_13348848_13351878_13351981_13352079_13352185_13353553_13353661_13353914_13354108_13358221_13358396_13360269_13360492_13365945_13366092_13371833_13372033_13373717_13373874_13375503_13375642_13376290_13376432_13377455_13377563_13378911_13378981_13379562_13379722_13386274_13386408_13388302_13388454_13391210_13391308_13397356_13397489_13399724_13399862_13420059
H1_mix_00065746	chr3	-	1456	4	NNC	ENSG00000163528.13	novel	1603	4	NA	NA	0	26261	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	163.426504038428	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTATGTCCTGCTAGCCT	-21	True	NA	NA	False	NA	NA	NA	14124870	14085815	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_14085842_14112079_14113195_14116425_14116525_14124654
H1_mix_00065747	chr3	-	1222	6	FSM	ENSG00000225733.7	ENST00000430166.5	1184	6	-43	5	-43	-5	multi-exon	FALSE	canonical	1	1	junction_4	1.54919333848297	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCATCTATGAGAGTGCAT	NA	False	NA	-8	True	AATAAA	-17	NA	14948467	14920351	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_14920484_14921308_14921460_14922300_14922405_14923090_14923349_14923976_14924099_14948012
H1_mix_00065748	chr3	-	540	2	FSM	ENSG00000131368.8	ENST00000474866.1	540	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATTGTCTCAGCTGGTT	NA	False	NA	NA	False	ACTAAA	-38	NA	15050102	15045098	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_15045244_15049707
H1_mix_00065749	chr3	-	6480	13	NNC	ENSG00000131381.12	novel	3005	13	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_11	26.3927336380468	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGGGGGTGTGTGTGTCT	18	True	NA	-12	True	AATAAA	-13	NA	15099124	15070073	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_15074931_15075605_15075711_15077061_15077165_15078074_15078162_15080731_15080803_15082366_15082609_15084734_15084897_15084999_15085046_15085860_15085962_15090398_15090540_15095972_15096289_15096551_15096711_15099034
H1_mix_00065750	chr3	-	3269	13	NNC	ENSG00000131381.12	novel	3005	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_9	28.5466236571371	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATAAAATAGAAACTAG	NA	False	NA	-69	True	NA	NA	NA	15099163	15073604	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_15074931_15075605_15075711_15077061_15077165_15078074_15078162_15080731_15080803_15082366_15082609_15084734_15084897_15084999_15085046_15085860_15085962_15090134_15090540_15095972_15096289_15096534_15096711_15099034
H1_mix_00065752	chr3	-	365	3	FSM	ENSG00000229271.2	ENST00000426218.1	411	3	0	46	0	-46	multi-exon	FALSE	canonical	1	1	junction_1	4	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTCTGAATCAATACAAAT	414	False	NA	NA	False	AATAGA	-12	NA	16697479	16688031	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_16688212_16692288_16692373_16697378
H1_mix_00065754	chr3	-	6303	21	NIC	ENSG00000131374.14	novel	7854	22	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	1	6	junction_18	21.9658826364888	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATAGCTTGACTTATTCC	173	False	NA	0	True	AATAAA	-20	NA	17742565	17157162	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_17161257_17166766_17166929_17167748_17167829_17185108_17185209_17214206_17214371_17238162_17238420_17258505_17258592_17291894_17292002_17307991_17308135_17372074_17372248_17374470_17374541_17374628_17374680_17376524_17376614_17383912_17384016_17403180_17403249_17404693_17404769_17404871_17404962_17406417_17406527_17508473_17508606_17623848_17623914_17742480
H1_mix_00065755	chr3	-	6497	23	NIC	ENSG00000131374.14	novel	7854	22	NA	NA	4	-1	combination_of_known_junctions	TRUE	canonical	0	0	junction_20	26.8186825839225	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATAGCTTGACTTATTCC	46	True	NA	0	True	AATAAA	-20	NA	17742571	17157162	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_17161257_17166766_17166929_17167748_17167829_17185108_17185209_17214206_17214371_17238162_17238420_17258505_17258592_17291894_17292002_17307991_17308135_17372074_17372248_17374470_17374541_17374628_17374680_17376524_17376614_17383912_17384016_17403180_17403249_17404693_17404769_17404871_17404962_17406417_17406527_17428449_17428520_17508473_17508606_17622647_17622766_17623848_17623914_17742480
H1_mix_00065757	chr3	-	222	1	FSM	ENSG00000214286.2	ENST00000417487.1	715	1	608	-115	608	115	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTCAAATCTTTACATTT	NA	False	NA	NA	False	TATAAA	-4	NA	17877561	17877339	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_17877300_17877600
H1_mix_00065758	chr3	-	3798	11	NIC	ENSG00000182568.17	novel	7822	11	NA	NA	13	-2	combination_of_known_junctions	FALSE	canonical	2	11	junction_10	18.2617085728581	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATGGTAGGGTTTGTCT	729	False	NA	-8	True	ATTAAA	-16	NA	18444860	18347941	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_18349683_18351991_18352196_18378169_18378326_18386398_18386612_18394461_18394917_18397178_18397291_18415110_18415235_18416006_18416134_18416901_18417079_18420756_18420992_18444606
H1_mix_00065759	chr3	-	456	3	FSM	ENSG00000163576.18	ENST00000467602.5	456	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTCTGTCTGTCCTTGC	NA	False	NA	NA	False	TTTAAA	-14	NA	19898824	19884361	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_19884616_19896686_19896842_19898777
H1_mix_00065760	chr3	-	4353	8	NNC	ENSG00000129810.15	novel	2338	9	NA	NA	0	715	intron_retention	FALSE	canonical	0	0	junction_7	77.3892889282252	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCTGAGGCAGGAGAACG	8	True	NA	NA	False	AATAGA	-38	NA	20186191	20168765	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_20170816_20171042_20171233_20174248_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20185367
H1_mix_00065761	chr3	-	2466	8	NNC	ENSG00000129810.15	novel	2338	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	20	junction_7	70.8816201961598	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATAAGCTTCTGGCATC	8	True	NA	NA	False	AATGAA	-27	NA	20186191	20170060	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_20170816_20171042_20171233_20174248_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20185959
H1_mix_00065763	chr3	-	530	6	FSM	ENSG00000163491.17	ENST00000435750.1	671	6	141	0	64	0	multi-exon	FALSE	canonical	2	3	junction_1	1.74355957741627	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTGTTAATCTGTCTGA	72	False	NA	NA	False	NA	NA	NA	27369319	27322225	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_27322262_27344271_27344371_27346085_27346217_27352464_27352526_27352811_27352920_27369224
H1_mix_00065764	chr3	-	439	2	FSM	ENSG00000163512.14	ENST00000476174.2	439	2	0	0	0	0	multi-exon	FALSE	canonical	2	79	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAATTCCTGGGTATTTC	NA	False	NA	NA	False	NA	NA	NA	28327002	28324186	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_28324455_28326831
H1_mix_00065765	chr3	-	1485	7	FSM	ENSG00000163512.14	ENST00000463512.5	1485	7	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	32.1735743878247	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACACCAAAAGCAAATTTTC	21	True	NA	NA	False	NA	NA	NA	28348972	28326489	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_28326951_28332368_28332428_28336736_28336886_28337936_28338037_28338492_28338616_28340401_28340623_28348600
H1_mix_00065767	chr3	-	1339	1	FSM	ENSG00000213854.3	ENST00000439038.1	900	1	722	-1161	722	1161	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAAATAGCCATACT	NA	False	NA	NA	False	AATAAA	-18	NA	31181928	31180589	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_31180600_31181900
H1_mix_00065768	chr3	-	1827	11	FSM	ENSG00000144635.9	ENST00000432458.6	1827	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	117.255447634641	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTATCAGATAGCGTTT	33	False	32570891	87	True	AATAAA	-29	NA	32570858	32526283	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_32526909_32528445_32528602_32529539_32529661_32530283_32530329_32530460_32530521_32532985_32533098_32534510_32534647_32537010_32537105_32541036_32541207_32570345_32570420_32570624
H1_mix_00065769	chr3	-	4396	16	NIC	ENSG00000153560.12	novel	4175	16	NA	NA	-13	0	intron_retention	FALSE	canonical	3	47	junction_4	90.8320550368768	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGTCTCATTTAAAATC	-8	True	NA	0	True	AATAAA	-23	NA	33440600	33388335	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_33390369_33392562_33392615_33393311_33393455_33396161_33396281_33396744_33396879_33397044_33397136_33400188_33400283_33400961_33401017_33402800_33402905_33409235_33409347_33409448_33409602_33411580_33411688_33412721_33412828_33416757_33416835_33425589_33425742_33439735
H1_mix_00065771	chr3	-	412	1	FSM	ENSG00000272334.1	ENST00000607089.1	556	1	142	2	142	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGATCTCTCATCTTTTGT	NA	False	NA	NA	False	ATTAAA	-18	NA	36973530	36973118	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_36973100_36973500
H1_mix_00065772	chr3	-	613	1	FSM	ENSG00000224858.5	ENST00000494408.1	492	1	3	-124	3	124	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAAACAAAACAAAACAGT	15	False	NA	NA	False	AATAAA	-15	NA	37017011	37016398	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_37016400_37017000
H1_mix_00065774	chr3	-	688	2	FSM	ENSG00000187091.14	ENST00000417185.6	685	2	0	-3	0	3	multi-exon	FALSE	canonical	3	138	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGTCTCTTTACCTGGA	NA	False	NA	-2	True	TATAAA	-21	NA	38008335	38007492	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_38007859_38008013
H1_mix_00065775	chr3	-	703	1	FSM	ENSG00000232439.1	ENST00000435924.1	524	1	-114	-65	-114	65	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACTTCATT	NA	False	NA	NA	False	AATAAA	-28	NA	38527439	38526736	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_38526700_38527400
H1_mix_00065776	chr3	-	8524	28	FSM	ENSG00000183873.18	ENST00000413689.6	8519	28	0	-5	0	0	multi-exon	TRUE	canonical	1	1	junction_11	10.0750271880281	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTAGGCTCTGTCCTTGTGC	2	True	NA	-7	True	AATAAA	-18	NA	38649687	38548056	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_38551559_38554278_38554550_38555655_38555761_38556440_38556579_38557230_38557285_38560146_38560429_38562414_38562538_38566408_38566583_38575296_38575452_38576660_38576782_38579333_38579496_38580930_38581372_38585690_38586042_38587399_38587574_38597728_38597968_38598917_38599051_38603711_38604084_38604728_38604909_38605950_38606149_38606668_38606811_38608150_38608215_38609733_38609965_38613974_38614067_38620842_38620972_38622399_38622490_38630310_38630430_38633034_38633360_38649530
H1_mix_00065777	chr3	-	784	2	FSM	ENSG00000183873.18	ENST00000476683.1	774	2	0	-10	0	10	multi-exon	FALSE	canonical	3	30	junction_1	0	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACATGTGGGCATCTTTT	411	False	NA	NA	False	AATAAA	-16	NA	38633220	38629831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_38630430_38633034
H1_mix_00065778	chr3	-	445	2	FSM	ENSG00000238267.1	ENST00000435940.1	476	2	1	30	1	-30	multi-exon	FALSE	non_canonical	0	0	junction_1	0	469	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATAAGCACATATTAAAACA	NA	False	NA	NA	False	TATAAA	-4	NA	39338878	39338158	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_39338448_39338722
H1_mix_00065779	chr3	-	2012	2	Intergenic	novelGene_893	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	2	junction_1	0	22	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCCAGCCTGGGTAACAG	NA	False	NA	NA	False	NA	NA	NA	40522302	40519852	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_40520091_40520528
H1_mix_00065780	chr3	-	1357	1	FSM	ENSG00000226845.1	ENST00000421044.1	1288	1	13	-82	13	82	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAACTAGCATTTATAAA	28	False	NA	NA	False	ATTAAA	-22	NA	40597481	40596124	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_40596100_40597500
H1_mix_00065781	chr3	-	954	3	NIC	ENSG00000093183.14	novel	1458	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	105.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTCTTTGCACTTATG	421	False	NA	-22	True	AATAAA	-18	NA	42581901	42547968	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_42548658_42568864_42569074_42581845
H1_mix_00065782	chr3	-	1458	6	FSM	ENSG00000093183.14	ENST00000423701.6	1458	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	72.6652599252215	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTCTTTGCACTTATG	24	True	NA	-22	True	AATAAA	-18	NA	42581942	42547968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_42548658_42557577_42557697_42561116_42561297_42563522_42563687_42568864_42569074_42581845
H1_mix_00065783	chr3	-	983	3	FSM	ENSG00000181061.14	ENST00000470543.1	983	3	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_2	1822	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATTTTTTCCATAAGAAT	3	True	NA	NA	False	AATGAA	-23	NA	42804488	42784525	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_42785321_42786027_42786163_42804435
H1_mix_00065784	chr3	-	2353	17	FSM	ENSG00000012223.13	ENST00000231751.9	2721	17	0	368	0	6	multi-exon	FALSE	canonical	1	1	junction_3	1.78535710713571	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCTTATAAAGTGTCACT	0	True	NA	NA	False	AGTAAA	-23	NA	46464905	46436012	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_46436230_46437939_46438130_46439295_46439481_46441415_46441484_46443440_46443583_46445280_46445437_46446439_46446494_46447307_46447399_46448862_46449018_46449853_46450029_46450494_46450674_46454304_46454361_46455294_46455443_46455795_46455979_46456289_46456399_46459655_46459820_46464824
H1_mix_00065785	chr3	-	3937	26	FSM	ENSG00000178038.17	ENST00000434140.5	3937	26	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_14	5.27636238330917	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGACCCTGCTGTAGTT	-13	True	NA	0	True	AATAAA	-16	NA	46693704	46670281	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_46671065_46671487_46671585_46671883_46672034_46672139_46672202_46673338_46673382_46674565_46674740_46675617_46675977_46676244_46676403_46676641_46676739_46676848_46677023_46678258_46678390_46679209_46679288_46680429_46680542_46681245_46681408_46681503_46681599_46682028_46682095_46683129_46683327_46683781_46683849_46683988_46684048_46685524_46685645_46686307_46686440_46686982_46687149_46687618_46687685_46688097_46688297_46689337_46689466_46693642
H1_mix_00065787	chr3	-	1207	5	NNC	ENSG00000088727.14	novel	3311	22	NA	NA	-308	4	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	49.1191154236312	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTGTCTGTCTCCATG	NA	False	NA	-1	True	AATAAA	-26	NA	47283759	47275223	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_47275491_47277281_47277380_47282494_47283120_47283400_47283515_47283656
H1_mix_00065788	chr3	-	855	4	ISM	ENSG00000088727.14	ENST00000452770.6	2707	22	-173	46584	2	-8	5prime_fragment	FALSE	canonical	3	9	junction_3	48.1456124688429	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTATCATTTGTATGTTTG	33	False	NA	-13	True	AATAAA	-14	NA	47282750	47275235	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_47275491_47277281_47277380_47282139_47282386_47282494
H1_mix_00065789	chr3	-	4282	24	NIC	ENSG00000114650.21	novel	4188	24	NA	NA	25	-12	combination_of_known_splicesites	FALSE	canonical	1	3	junction_23	171.438570236803	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGAGCTACTTGTGTC	-26	True	NA	-11	True	ATTAAA	-36	NA	47475912	47413692	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_47414100_47414179_47414387_47414571_47414653_47414826_47414994_47415097_47415181_47417121_47417208_47417303_47417824_47418133_47418250_47418320_47418523_47418654_47418844_47419327_47419705_47420553_47420773_47420930_47421030_47422441_47422537_47423932_47424046_47425484_47425612_47425996_47426170_47427156_47427263_47427446_47427668_47428512_47428671_47435007_47435138_47442871_47443092_47466375_47466448_47475798
H1_mix_00065790	chr3	-	3726	20	NIC	ENSG00000114650.21	novel	4254	23	NA	NA	13	6	combination_of_known_junctions	FALSE	canonical	3	45	junction_17	176.2507814171	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCTGTCAGGCACTTTGG	-38	True	NA	-25	True	ATTAAA	-22	NA	47475924	47413706	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_47414100_47414179_47414387_47414571_47414653_47414826_47414994_47415097_47415181_47417121_47417208_47417303_47417827_47418133_47418250_47418320_47418523_47418654_47418844_47419327_47419705_47420553_47420773_47420930_47421030_47422441_47422537_47423932_47424046_47425484_47425612_47425996_47426170_47435007_47435138_47442871_47443092_47475798
H1_mix_00065792	chr3	-	1565	7	NNC	ENSG00000163832.16	novel	1352	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	91.5964882878523	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCCTGTGGGTTGTCTTG	316	False	NA	-1	True	AATAAA	-19	NA	47513381	47495639	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_47496198_47498285_47498433_47501649_47501852_47504329_47504449_47510183_47510255_47511147_47511227_47512992
H1_mix_00065796	chr3	-	3790	16	NNC	ENSG00000164045.12	novel	3844	15	NA	NA	0	41545	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	92.4977837572339	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCACGCGCGGTGGCTCAT	43	False	NA	NA	False	NA	NA	NA	48188356	48115600	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_48115641_48157178_48159086_48159343_48159456_48164306_48164438_48165635_48165735_48165830_48165894_48167845_48167945_48174283_48174458_48177370_48177443_48177853_48177989_48180720_48180841_48182928_48183031_48183799_48183837_48184652_48184696_48186702_48186780_48187777
H1_mix_00065797	chr3	-	3878	17	NNC	ENSG00000164045.12	novel	3844	15	NA	NA	-185	41545	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	105.737421681021	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCACGCGCGGTGGCTCAT	NA	False	NA	NA	False	NA	NA	NA	48188602	48115600	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_48115640_48157178_48159086_48159343_48159456_48164306_48164438_48165635_48165735_48165830_48165894_48167845_48167945_48174283_48174458_48177370_48177443_48177853_48177989_48180720_48180841_48182928_48183028_48183799_48183837_48184652_48184696_48186702_48186780_48187777_48188216_48188369
H1_mix_00065798	chr3	-	1233	5	NIC	ENSG00000172113.10	novel	2004	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_2	65.4078550328628	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTATGCTGCCACATTT	17	True	NA	-25	True	AATAAA	-19	NA	48301358	48293994	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_48294804_48295074_48295236_48296726_48296830_48298426_48298524_48301295
H1_mix_00065800	chr3	-	2993	18	NNC	ENSG00000164050.13	novel	7178	38	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_8	90.6446730227698	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTCTGATGTGTGAGCC	9610	False	NA	-5	True	ATTAAA	-16	NA	48414957	48403853	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_48404591_48405723_48405799_48406822_48406899_48407026_48407092_48409328_48409477_48409570_48409732_48409904_48410078_48410295_48410384_48410454_48410559_48410867_48411037_48411862_48412010_48412237_48412305_48412441_48412621_48412741_48412960_48413068_48413170_48413669_48413819_48413894_48414072_48414798
H1_mix_00065801	chr3	-	3489	21	NNC	ENSG00000164050.13	novel	7178	38	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_3	87.2807395706521	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTCTGATGTGTGAGCC	9706	False	NA	-5	True	ATTAAA	-16	NA	48415652	48403853	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_48404591_48405723_48405799_48406567_48406741_48406822_48406899_48407026_48407092_48409328_48409477_48409570_48409732_48409904_48410078_48410295_48410381_48410454_48410559_48410867_48411037_48411862_48412010_48412237_48412305_48412441_48412621_48412741_48412960_48413068_48413170_48413669_48413819_48413894_48414072_48414798_48415042_48415175_48415348_48415582
H1_mix_00065802	chr3	-	7124	38	NNC	ENSG00000164050.13	novel	7178	38	NA	NA	58	0	intron_retention	FALSE	canonical	3	38	junction_30	87.0364524021369	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTCTGATGTGTGAGCC	0	True	NA	-5	True	ATTAAA	-16	NA	48430028	48403853	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_48404591_48405723_48405799_48406822_48406899_48407026_48407092_48409328_48409477_48409570_48409732_48409904_48410078_48410295_48410381_48410454_48410559_48410867_48411037_48411862_48412010_48412237_48412305_48412441_48412621_48412741_48412960_48413068_48413170_48413669_48413819_48413894_48414072_48414798_48415042_48415175_48415348_48415582_48415760_48416030_48416168_48416345_48416452_48417910_48418063_48418190_48418364_48418448_48418543_48418916_48419040_48419243_48419367_48419576_48420258_48420664_48420774_48420847_48420957_48421223_48421385_48421673_48421807_48422104_48422206_48422330_48422460_48422764_48422948_48423504_48424618_48425280_48425334_48430007
H1_mix_00065803	chr3	-	5859	37	FSM	ENSG00000164050.13	ENST00000456774.5	5859	37	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_28	87.8303771728266	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCCAGGAGCCACGGCCT	9354	False	NA	NA	False	AAAACA	-18	NA	48424611	48404485	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48404591_48405723_48405799_48406822_48406899_48407026_48407092_48409328_48409477_48409570_48409732_48409904_48410078_48410295_48410381_48410454_48410559_48410867_48411037_48411862_48412010_48412237_48412305_48412441_48412621_48412741_48412960_48413068_48413170_48413669_48413819_48413894_48414072_48414798_48415042_48415175_48415348_48415582_48415760_48416030_48416168_48416345_48416452_48417910_48418063_48418190_48418364_48418448_48418543_48418916_48419040_48419243_48419367_48419576_48419675_48420223_48420258_48420664_48420774_48420847_48420957_48421227_48421385_48421673_48421807_48422104_48422206_48422330_48422460_48422764_48422948_48423504
H1_mix_00065806	chr3	-	2081	6	FSM	ENSG00000164054.17	ENST00000444115.5	2081	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	743.865417935261	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCCTTTCTTCCTGGCCT	11	False	NA	-23	True	AATAAA	-21	NA	48504826	48467869	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48469187_48469360_48469574_48469727_48469844_48479176_48479258_48501136_48501294_48504629
H1_mix_00065808	chr3	-	1700	15	FSM	ENSG00000114268.12	ENST00000490115.5	1757	15	57	0	24	0	multi-exon	FALSE	canonical	0	0	junction_11	23.775308749256	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGATAGTCACCATGCCA	9369	False	NA	NA	False	NA	NA	NA	48556866	48519673	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48519807_48521985_48522051_48523536_48523600_48523700_48523831_48525564_48525670_48535511_48535659_48536255_48536464_48538497_48538620_48539253_48539311_48539696_48539772_48543579_48543647_48548531_48548660_48549863_48549961_48550117_48550235_48556680
H1_mix_00065810	chr3	-	3900	59	ISM	ENSG00000114270.18	ENST00000328333.12	9276	118	15860	0	5113	0	3prime_fragment	FALSE	canonical	3	12	junction_27	12.502461113246	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTGTGACTGTTTGGG	NA	False	NA	-1	True	ATTAAA	-19	NA	48579407	48564072	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_48564423_48564782_48564981_48565108_48565202_48565409_48565497_48565635_48565669_48566266_48566316_48566509_48566564_48566659_48566738_48566906_48567024_48567127_48567191_48567573_48567637_48567709_48567764_48567837_48567892_48568089_48568171_48568498_48568535_48568783_48568856_48569374_48569447_48569591_48569649_48569724_48569761_48569879_48569916_48570133_48570179_48570274_48570335_48570464_48570501_48570638_48570711_48570860_48570969_48571100_48571161_48571242_48571279_48572000_48572046_48572126_48572172_48572379_48572422_48572502_48572539_48572670_48572740_48572861_48572943_48573020_48573057_48573173_48573237_48573315_48573349_48573512_48573558_48573689_48573726_48573854_48573891_48574261_48574307_48574487_48574551_48574676_48574722_48574796_48574866_48575063_48575127_48575206_48575243_48575338_48575540_48575625_48575749_48575866_48575903_48576248_48576297_48576399_48576436_48576521_48576558_48576675_48576772_48576883_48576920_48576991_48577028_48578320_48578366_48578452_48578516_48578918_48578955_48579196_48579278_48579368
H1_mix_00065811	chr3	-	2438	20	NIC	ENSG00000225697.13	novel	2630	21	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_16	71.5168848590639	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCAGTCTCTGCTGTGGCT	8	True	NA	-5	True	AATAAA	-16	NA	48635447	48625722	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_48626001_48626217_48626355_48626630_48626686_48626875_48627053_48627945_48628039_48628433_48628542_48628621_48628715_48629641_48629712_48629871_48629979_48630061_48630158_48630437_48630516_48630606_48630721_48630992_48631141_48631223_48631307_48631648_48631798_48631879_48632045_48632973_48633085_48633250_48633391_48633476_48633636_48635370
H1_mix_00065812	chr3	-	2729	20	FSM	ENSG00000225697.13	ENST00000358747.10	2729	20	0	0	0	0	multi-exon	FALSE	canonical	2	97	junction_4	44.6049448831992	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCAGTCTCTGCTGTGG	1609	False	NA	-7	True	AATAAA	-14	NA	48633846	48625724	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48626001_48626217_48626355_48626630_48626686_48626875_48627056_48627945_48628039_48628433_48628542_48628621_48628715_48629641_48629712_48629871_48629979_48630061_48630158_48630437_48630516_48630606_48630721_48630992_48631141_48631223_48631307_48631648_48631802_48631879_48632045_48632244_48632397_48632973_48633085_48633250_48633391_48633476
H1_mix_00065813	chr3	-	5682	12	FSM	ENSG00000225697.13	ENST00000489483.5	5682	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	70.2791364829804	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCAGTCTCTGCTGTGG	1128	False	NA	-7	True	AATAAA	-14	NA	48634327	48625724	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48626001_48626217_48626355_48626630_48626686_48626875_48628542_48629641_48629712_48629871_48629979_48630061_48630158_48630437_48630516_48630606_48630721_48630992_48633085_48633250_48633391_48633476
H1_mix_00065814	chr3	-	8257	35	NNC	ENSG00000008300.17	novel	11933	35	NA	NA	3679	0	at_least_one_novel_splicesite	TRUE	canonical	2	5	junction_34	19.9751792349187	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTGCCTTTTCCTGTTG	4880	False	NA	-3	True	AATAAA	-16	NA	48659207	48636462	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_48638233_48639673_48640560_48641323_48641525_48641850_48642010_48642357_48642468_48642735_48642885_48642966_48643084_48643553_48643681_48644215_48644296_48644715_48644829_48645034_48645210_48645442_48645650_48645741_48645869_48646089_48646258_48646762_48646929_48647840_48647997_48648265_48648462_48648718_48648929_48649120_48649216_48650479_48650582_48650891_48651076_48651358_48651480_48651576_48651719_48651876_48652049_48652436_48652554_48653001_48653188_48653618_48653789_48653877_48654004_48654288_48654453_48655043_48655202_48655305_48655395_48655735_48655852_48656139_48656366_48656697_48657349_48658886
H1_mix_00065816	chr3	-	2036	5	NIC	ENSG00000068745.15	novel	1746	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	169	junction_3	95.7418403833977	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGGGGATGCTAGGGCT	-16	True	NA	NA	False	NA	NA	NA	48717221	48689537	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_48689714_48691306_48691483_48692953_48694241_48695089_48695422_48717156
H1_mix_00065817	chr3	-	1138	4	NIC	ENSG00000068745.15	novel	1309	4	NA	NA	0	-25	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	111.79445424528	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAAAATTCCCGCAAACT	2	True	NA	-98	True	TTTAAA	-37	NA	48717203	48693545	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_48694241_48694458_48694526_48695089_48695419_48717156
H1_mix_00065820	chr3	-	555	2	FSM	ENSG00000235236.1	ENST00000429681.1	555	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAAAAAAAAAGAT	NA	False	NA	NA	False	AATAAA	-22	NA	48983866	48979931	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_48980347_48983726
H1_mix_00065823	chr3	-	1749	13	FSM	ENSG00000178035.13	ENST00000472328.2	1749	13	0	0	0	0	multi-exon	FALSE	canonical	3	1231	junction_1	283.116142245546	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGCCTGATCTTTCAAC	-13	True	NA	31	True	AATAAA	-18	NA	49029416	49024324	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49024405_49024494_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028323_49028430_49028533_49028757_49028807_49029252
H1_mix_00065824	chr3	-	4923	2	FSM	ENSG00000178035.13	ENST00000678177.1	4906	2	0	-17	0	0	multi-exon	FALSE	canonical	3	2098	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAAAGTGATGCCTGAT	3812	False	NA	23	True	AATAAA	-10	NA	49029354	49024332	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49026420_49026518
H1_mix_00065828	chr3	-	331	3	FSM	ENSG00000198218.11	ENST00000498440.5	331	3	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_2	4	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCCTCTGACATATATTT	NA	False	NA	NA	False	NA	NA	NA	49046458	49033046	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49033229_49044389_49044505_49046424
H1_mix_00065829	chr3	-	967	6	FSM	ENSG00000172053.18	ENST00000470113.2	954	6	0	-13	0	0	multi-exon	FALSE	canonical	3	732	junction_3	42.4951761968344	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAATTCTCCTAGAGTCT	5751	False	NA	-19	True	AATAAA	-6	NA	49099347	49095947	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49096080_49097991_49098481_49098599_49098693_49098884_49098990_49099109_49099254_49099343
H1_mix_00065832	chr3	-	3823	22	NIC	ENSG00000172046.20	novel	4719	27	NA	NA	442	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_20	71.2237380490381	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACTGTGATCCACCACAT	3647	False	NA	-16	True	AATAAA	-20	NA	49117269	49108045	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_49108529_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112403_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115939_49116046_49116163_49116279_49116352_49116450_49116608_49116720_49116944_49117058
H1_mix_00065833	chr3	-	4691	27	NIC	ENSG00000172046.20	novel	4721	27	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	95	junction_17	52.8269475791716	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACTGTGATCCACCACAT	12	True	NA	-16	True	AATAAA	-20	NA	49120795	49108045	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_49108529_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112403_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115939_49116046_49116163_49116279_49116352_49116450_49116608_49116726_49116944_49117058_49117362_49117436_49117571_49117656_49117831_49117946_49118121_49119021_49119282_49120755
H1_mix_00065834	chr3	-	4520	26	NIC	ENSG00000172046.20	novel	4721	27	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_21	62.910094579487	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACTGTGATCCACCACAT	-5	True	NA	-16	True	AATAAA	-20	NA	49120921	49108045	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_49108529_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112403_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115945_49116046_49116163_49116279_49116352_49116450_49116608_49116726_49116944_49117436_49117571_49117656_49117831_49117946_49118121_49119021_49119282_49120755
H1_mix_00065835	chr3	-	4302	26	NIC	ENSG00000172046.20	novel	4384	26	NA	NA	12	-1	combination_of_known_junctions	FALSE	canonical	3	38	junction_21	70.2862262466836	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATTGTAATTTTTTTT	12	True	NA	-29	True	TATAAA	-17	NA	49120795	49108131	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_49108529_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112403_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115939_49116046_49116163_49116279_49116352_49116450_49116608_49116726_49116944_49117436_49117571_49117656_49117831_49117946_49118121_49119021_49119282_49120755
H1_mix_00065837	chr3	-	3647	22	NNC	ENSG00000114316.13	novel	4070	22	NA	NA	0	4610	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	53.0470633466662	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTAGGAGAAAAATTAGAAG	8	True	NA	NA	False	AAAAAG	-1	NA	49340029	49272533	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_49272563_49277430_49278452_49278813_49278903_49280743_49280848_49283986_49284137_49284465_49284585_49284848_49284920_49286097_49286326_49292509_49292599_49294406_49294599_49297869_49297965_49298551_49298636_49300466_49300692_49302383_49302543_49305714_49305889_49310619_49310738_49324701_49324764_49324893_49325040_49325718_49325846_49327685_49327817_49335468_49335597_49339923
H1_mix_00065838	chr3	-	894	3	NNC	ENSG00000233276.8	novel	899	2	NA	NA	0	74167	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1188.5	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCGGCACAGTGGCTCA	3	True	NA	NA	False	NA	NA	NA	49358325	49283008	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_49283035_49357178_49357748_49358026
H1_mix_00065839	chr3	-	893	3	NNC	ENSG00000233276.8	novel	899	2	NA	NA	0	74167	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1188.5	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCGGCACAGTGGCTCA	3	True	NA	NA	False	NA	NA	NA	49358325	49283008	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_49283034_49357178_49357748_49358026
H1_mix_00065840	chr3	-	1775	7	NNC	ENSG00000114316.13	novel	1454	7	NA	NA	-165	110	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	103.747155248817	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAACCGGGCTTGGTGGCT	-9	True	NA	NA	False	AATAAA	-31	NA	49340218	49316621	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_49317479_49324701_49324764_49324864_49325040_49325718_49325846_49327685_49327817_49335468_49335597_49339923
H1_mix_00065842	chr3	-	1649	4	FSM	ENSG00000067560.14	ENST00000454011.7	1641	4	0	-8	0	7	multi-exon	FALSE	canonical	0	0	junction_1	1135.62082873936	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTTGTGTTGCTCTCTC	46	True	NA	3	True	AATAAA	-28	NA	49411928	49359131	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49360383_49362495_49362627_49375433_49375592_49411819
H1_mix_00065844	chr3	-	3256	8	FSM	ENSG00000283189.2	ENST00000636204.1	3240	8	0	-16	0	-1	multi-exon	FALSE	canonical	3	372	junction_3	82.0308553197502	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTAGCTTCATTGTTCT	5649	False	NA	-7	True	ATTAAA	-19	NA	49423643	49416777	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49419789_49420210_49420343_49421491_49421573_49422103
H1_mix_00065846	chr3	-	1842	9	FSM	ENSG00000173531.16	ENST00000492329.5	2006	9	164	0	7	0	multi-exon	FALSE	canonical	3	8	junction_8	6.01560470775798	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCCATGTTTCCTCTTT	2671	False	NA	-54	True	NA	NA	NA	49686796	49683975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49684190_49684313_49684454_49684549_49684657_49684737_49684885_49685011_49685090_49685261_49685383_49685470_49685507_49685595_49686482_49686683
H1_mix_00065847	chr3	-	986	10	NNC	ENSG00000173531.16	novel	3042	18	NA	NA	-246	-116	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	7.09372875533883	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTACCCACAACTGCTGG	2951	False	NA	NA	False	NA	NA	NA	49686516	49684164	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_49684190_49684313_49684454_49684549_49684657_49684737_49684885_49685011_49685090_49685261_49685383_49685470_49685507_49685595_49685733_49685859_49685963_49686424
H1_mix_00065848	chr3	-	4808	6	FSM	ENSG00000176095.12	ENST00000613416.4	4806	6	0	-2	0	1	multi-exon	FALSE	canonical	1	2	junction_5	73.1721258403772	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAGTCTGTCTTTGTGAAA	338	False	NA	0	True	AATAAA	-17	NA	49786194	49724292	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49727656_49728102_49728279_49732790_49732973_49738211_49738423_49747817_49748169_49785669
H1_mix_00065850	chr3	-	330	2	FSM	ENSG00000182179.13	ENST00000497908.1	608	2	293	-15	293	0	multi-exon	FALSE	canonical	0	0	junction_1	0	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCATTGCAGAGAGGATGGA	7928	False	NA	2	True	AATAAA	-16	NA	49805997	49805208	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_49805438_49805896
H1_mix_00065852	chr3	-	2861	4	NIC	ENSG00000164077.15	novel	2527	7	NA	NA	5	2	intron_retention	FALSE	canonical	3	51	junction_1	11.2644968324772	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGTCAAGCTCTGTCAC	-8	True	NA	-8	True	ATTAAA	-16	NA	49929829	49908870	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_49910885_49911525_49912012_49913219_49913360_49929608
H1_mix_00065853	chr3	-	1313	5	NIC	ENSG00000164077.15	novel	2527	7	NA	NA	24	2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	29.6426635105552	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGTCAAGCTCTGTCAC	13	True	NA	-8	True	ATTAAA	-16	NA	49929863	49908870	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_49909155_49909252_49909401_49911525_49912012_49913219_49913360_49929608
H1_mix_00065855	chr3	-	1635	3	FSM	ENSG00000186792.17	ENST00000359051.7	1635	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGGTTTGGCTGTTGCTC	10	True	NA	-4	True	CATAAA	-19	NA	50298859	50292830	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50293516_50294708_50295620_50298820
H1_mix_00065856	chr3	-	1165	2	FSM	ENSG00000243477.6	ENST00000417393.1	1163	2	0	-2	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTGACAGTTTATTTG	10	True	NA	-4	True	AATAAA	-15	NA	50298859	50296401	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50297528_50298820
H1_mix_00065857	chr3	-	2514	3	FSM	ENSG00000114378.17	ENST00000266031.8	2517	3	0	3	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGCTGTTTACTGAGCGC	1	True	NA	-3	True	AATAAA	-15	NA	50303572	50299892	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50300801_50300987_50301078_50302056
H1_mix_00065858	chr3	-	745	2	FSM	ENSG00000068001.14	ENST00000458018.1	745	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGACACAGGAGTCTGCGGG	8617	False	NA	NA	False	NA	NA	NA	50321217	50320126	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50320536_50320881
H1_mix_00065860	chr3	-	1773	5	FSM	ENSG00000068028.18	ENST00000395117.6	1745	5	-26	-2	-26	0	multi-exon	FALSE	canonical	0	0	junction_4	45.7295036054405	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTTGGAATCTTTTAT	9895	False	NA	-10	True	AATAAA	-16	NA	50340867	50329785	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50330728_50331333_50331450_50331558_50331857_50332049_50332155_50340555
H1_mix_00065861	chr3	-	1021	9	FSM	ENSG00000114388.14	ENST00000433999.5	1006	9	0	-15	0	0	multi-exon	FALSE	canonical	2	3	junction_7	69.4917935802495	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGCAGCATGTTGATGAA	17	True	NA	NA	False	NA	NA	NA	50350745	50348145	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_50348242_50348316_50348411_50348526_50348564_50348684_50348783_50348873_50349011_50349385_50349495_50349664_50349834_50349912_50350023_50350574
H1_mix_00065863	chr3	-	1886	12	NIC	ENSG00000090097.22	novel	2015	13	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	10	junction_6	56.9440787015959	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGAAATACTGGTGTTG	-10	True	NA	-10	True	AATAAA	-20	NA	51967457	51957453	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_51958350_51958789_51958960_51959046_51959100_51959228_51959293_51959366_51959412_51959576_51959652_51960188_51960321_51960525_51960643_51960865_51960899_51961009_51961034_51961159_51961305_51967325
H1_mix_00065864	chr3	-	2267	16	NIC	ENSG00000090097.22	novel	2156	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_13	73.4261231140223	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGAAATACTGGTGTTG	7452	False	NA	-10	True	AATAAA	-20	NA	51968387	51957453	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_51958350_51958789_51958960_51959046_51959100_51959228_51959293_51959366_51959412_51959576_51959652_51959894_51960024_51960188_51960321_51960525_51960643_51960865_51960899_51961009_51961034_51961159_51961305_51961940_51962089_51962809_51962893_51967325_51967435_51968343
H1_mix_00065865	chr3	-	1814	13	NIC	ENSG00000090097.22	novel	2015	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	53.9866238577257	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGTTGTGAAATACTGGT	-10	True	NA	-14	True	AATAAA	-16	NA	51967457	51957457	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_51958153_51958789_51958960_51959046_51959100_51959228_51959293_51959366_51959412_51959576_51959652_51959894_51960024_51960188_51960321_51960525_51960643_51960865_51960899_51961009_51961034_51961159_51961305_51967325
H1_mix_00065866	chr3	-	2202	15	NIC	ENSG00000090097.22	novel	2156	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_13	65.6953777145792	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGTTGTGAAATACTGGT	-3	True	NA	-14	True	AATAAA	-16	NA	51968409	51957457	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_51958350_51958789_51958960_51959046_51959100_51959228_51959293_51959366_51959412_51959576_51959652_51959894_51960024_51960188_51960321_51960525_51960643_51960865_51960899_51961009_51961034_51961159_51961305_51961940_51962089_51967325_51967435_51968343
H1_mix_00065867	chr3	-	1833	4	FSM	ENSG00000114779.20	ENST00000395008.6	1818	4	0	-15	0	0	multi-exon	FALSE	canonical	2	6	junction_3	9.56846672960488	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCACCGGCTCCTGCTTCT	-4	True	NA	-12	True	AATAAA	-15	NA	51974031	51968514	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_51969606_51969942_51970185_51971459_51971893_51973964
H1_mix_00065868	chr3	-	719	5	FSM	ENSG00000162244.12	ENST00000480306.5	719	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	3214.55148504422	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTAGCCTCTGTCTATG	1	True	NA	-33	True	AATAAA	-13	NA	51995881	51993627	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_51994127_51994772_51994858_51995041_51995107_51995424_51995470_51995856
H1_mix_00065869	chr3	-	713	4	FSM	ENSG00000162244.12	ENST00000495383.5	713	4	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_3	3616.91203468742	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTTAGCCTCTGTCTAT	566	False	NA	-34	True	AATAAA	-12	NA	51995844	51993628	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_51994127_51995041_51995107_51995424_51995470_51995739
H1_mix_00065871	chr3	-	1531	8	FSM	ENSG00000247596.10	ENST00000678352.1	1531	8	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_7	34.4164175346355	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTGCTTGGCCCTGAG	-1	True	NA	-20	True	AATAAA	-16	NA	52235190	52228611	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52229202_52229660_52229783_52229919_52230071_52230869_52230996_52231126_52231232_52231443_52231540_52231943_52232123_52235028
H1_mix_00065874	chr3	-	2979	6	FSM	ENSG00000247596.10	ENST00000472755.2	2955	6	0	-24	0	0	multi-exon	FALSE	canonical	3	485	junction_4	37.9452236783498	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAATATTTTTAAATCA	-26	True	NA	-41	True	NA	NA	NA	52239149	52228632	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52230996_52231126_52231232_52231443_52231540_52231943_52232123_52235028_52235107_52238991
H1_mix_00065875	chr3	-	665	1	FSM	ENSG00000242797.3	ENST00000624537.1	697	1	36	-4	36	4	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCATACAATGTTTAGGAC	9658	False	NA	-4	True	AATAAA	-26	NA	52289240	52288575	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52288600_52289200
H1_mix_00065876	chr3	-	2722	7	ISM	ENSG00000163930.10	ENST00000296288.9	3434	17	4419	0	158	0	3prime_fragment	FALSE	canonical	3	315	junction_5	28.6400069832394	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAATCTCCTGAGAAATG	5037	False	NA	-1	True	AATAAA	-8	NA	52405495	52401025	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_52402422_52402601_52402675_52402778_52402872_52403137_52403299_52403415_52403895_52404452_52404587_52405109
H1_mix_00065877	chr3	-	4817	16	FSM	ENSG00000010319.7	ENST00000231721.7	4993	16	22	154	4	-154	multi-exon	FALSE	canonical	0	0	junction_1	1.72046505340853	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGCTGGAAAAGGACTTAAA	8959	False	NA	NA	False	NA	NA	NA	52445081	52433188	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52436074_52437526_52437667_52437970_52438200_52438919_52438962_52439679_52439772_52439866_52440099_52440376_52440522_52440753_52440824_52440933_52441049_52441263_52441410_52441573_52441691_52441818_52441910_52442184_52442305_52442558_52442622_52442746_52442908_52444912
H1_mix_00065879	chr3	-	1901	15	NNC	ENSG00000168268.11	novel	1877	14	NA	NA	0	60670	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	566.583495296904	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGTTCAATAACATTAGTC	-22	True	NA	NA	False	NA	NA	NA	52533857	52463714	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_52463740_52524387_52524732_52524816_52524882_52524962_52525104_52525208_52525296_52527293_52527376_52527616_52527719_52527828_52527932_52528012_52528074_52528182_52528312_52528445_52528540_52528636_52528693_52528860_52528936_52529149_52529335_52533505
H1_mix_00065880	chr3	-	7714	30	NIC	ENSG00000163939.18	novel	5015	30	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	3	53	junction_29	65.3644497879092	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGTTTGGTTGTTCTGTT	87	False	NA	-5	True	AATAAA	-30	NA	52685850	52545356	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_52548236_52550420_52550638_52550746_52550818_52561766_52561969_52563282_52563494_52564049_52564234_52576540_52576699_52579053_52579200_52586424_52586689_52587352_52587511_52589069_52589256_52603520_52603733_52609312_52609956_52615350_52615457_52617261_52617539_52627272_52627371_52628893_52629036_52634601_52634816_52641953_52642046_52643247_52643344_52644703_52644790_52648343_52648443_52651741_52651811_52658198_52658316_52662132_52662277_52668497_52668646_52678499_52678598_52679573_52679727_52682091_52682234_52685748
H1_mix_00065882	chr3	-	6252	4	NIC	ENSG00000248592.7	novel	755	5	NA	NA	2	3	intron_retention	FALSE	canonical	3	29	junction_2	59.6713219785406	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGGTGTTGGTTGGTCCCT	222	False	NA	-7	True	AATAAA	-29	NA	52842945	52833117	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_52833431_52833616_52833750_52834939_52840611_52842810
H1_mix_00065883	chr3	-	4828	9	NNC	ENSG00000213533.13	novel	4744	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	79.6773768079748	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCACATTTGTGGTTGTG	26	True	NA	NA	False	AATAAA	-37	NA	52897548	52836732	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_52840611_52842810_52842961_52843720_52843799_52844828_52844942_52847467_52847552_52849791_52849914_52852602_52852699_52855395_52855445_52897290
H1_mix_00065884	chr3	-	612	1	FSM	ENSG00000279144.1	ENST00000624222.1	469	1	57	-200	57	200	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCGAGTTGCCCTGACTT	NA	False	NA	NA	False	NA	NA	NA	52848496	52847884	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52847900_52848500
H1_mix_00065886	chr3	-	1034	5	FSM	ENSG00000163935.14	ENST00000482396.5	850	5	-184	0	-163	0	multi-exon	FALSE	canonical	0	0	junction_3	36.3490027373517	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATGAAATACTTCCTATC	435	False	NA	NA	False	NA	NA	NA	53046236	52943352	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_52943594_52954316_52954412_52969100_52969259_53043135_53043255_53045815
H1_mix_00065887	chr3	-	7286	6	FSM	ENSG00000163931.17	ENST00000460343.5	7286	6	0	0	0	0	multi-exon	FALSE	canonical	3	2959	junction_3	320.716323251561	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTGGCCCTGAAATGTT	6567	False	NA	-20	True	AATATA	-15	NA	53235607	53225651	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_53228150_53228275_53228360_53229006_53229138_53229279_53229437_53230456_53230622_53231356
H1_mix_00065890	chr3	-	693	2	FSM	ENSG00000163931.17	ENST00000466765.1	693	2	0	0	0	0	multi-exon	FALSE	canonical	3	3176	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAACTGTTCCCTCCAGGA	7014	False	NA	NA	False	NA	NA	NA	53235160	53232759	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_53233275_53234982
H1_mix_00065891	chr3	-	2773	6	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	0	3442	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	3512.04398605712	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGAGTGGTTTTTATTTT	NA	False	NA	-5	True	ATTAAA	-19	NA	54639857	54628679	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_54629473_54631643_54632808_54633558_54633741_54634460_54634566_54637673_54637950_54639604
H1_mix_00065892	chr3	-	2449	3	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	0	-204	at_least_one_novel_splicesite	FALSE	canonical	3	144	junction_1	3993.5	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTTTCCCAAACACAT	NA	False	NA	-12	True	AAAACA	-7	NA	54639857	54632325	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_54632503_54634460_54634566_54637690
H1_mix_00065893	chr3	-	2647	3	ISM	ENSG00000265992.1	ENST00000583516.1	3140	4	0	1244	0	-1244	5prime_fragment	FALSE	canonical	3	8131	junction_2	590	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACTAAGGCACAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	54639857	54633365	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_54633741_54634460_54634566_54637690
H1_mix_00065894	chr3	-	3158	2	ISM	ENSG00000187672.14	ENST00000486496.5	3488	3	3944	-5	944	5	3prime_fragment	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATTCTATCTCTAATAAA	9093	False	NA	-3	True	AATAAA	-23	NA	55606966	55508305	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_55511277_55606779
H1_mix_00065895	chr3	-	3302	16	NNC	ENSG00000187672.14	novel	1585	12	NA	NA	-36	-20176	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.84884418472684	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGACAAGTTGTGAGTAC	50	False	NA	NA	False	NA	NA	NA	56468503	55626771	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_55626843_55699377_55699513_55734770_55734919_55888388_55888550_55950424_55950561_55992056_55992251_56007180_56007322_56010448_56010590_56018893_56019032_56080816_56080985_56139508_56139677_56148976_56149133_56173445_56173521_56296018_56296436_56434350_56435148_56468247
H1_mix_00065899	chr3	-	426	1	FSM	ENSG00000272360.1	ENST00000607592.1	462	1	29	7	29	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATCAACATAACTGAGTGC	644	False	NA	NA	False	AATAAA	-12	NA	58491262	58490836	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_58490800_58491300
H1_mix_00065900	chr3	-	412	4	FSM	ENSG00000163689.21	ENST00000486145.6	461	4	0	49	0	-47	multi-exon	FALSE	canonical	1	1	junction_1	10.2740233382816	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCATGAACTTGAGCGGA	NA	False	NA	NA	False	NA	NA	NA	58831725	58717413	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_58717629_58753768_58753864_58806394_58806457_58831685
H1_mix_00065901	chr3	-	3113	16	NIC	ENSG00000163689.21	novel	3291	17	NA	NA	5	-3	combination_of_known_junctions	FALSE	canonical	1	7	junction_11	7.37443029814658	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAGCTTTTAAACTGCTT	-3	True	NA	-11	True	AATAAA	-16	NA	59050007	58742010	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_58742573_58753768_58753864_58806394_58806457_58831685_58831890_58849031_58849410_58863557_58863893_58866565_58866689_58867816_58867937_58869327_58869491_58870172_58870310_58884544_58884710_58937647_58937763_59039556_59039630_59046228_59046323_59047164_59047255_59049610
H1_mix_00065902	chr3	-	1123	2	FSM	ENSG00000241472.7	ENST00000662235.1	1109	2	0	-14	0	6	multi-exon	FALSE	canonical	1	1	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATGGGGTTTGCCTGAGG	NA	False	NA	-3	True	AATAAA	-27	NA	62263505	62260858	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_62261096_62262619
H1_mix_00065903	chr3	-	2017	5	FSM	ENSG00000241472.7	ENST00000669571.1	2521	5	40	464	-5	-136	multi-exon	FALSE	canonical	3	17	junction_1	18.2277261335582	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTTTTGCCCCCCGATC	-4	True	NA	NA	False	NA	NA	NA	62318897	62290994	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_62292718_62294699_62294779_62317105_62317193_62317807_62317904_62318865
H1_mix_00065904	chr3	-	296	4	NNC	ENSG00000241472.7	novel	1841	6	NA	NA	0	-21523	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	20.6774165590278	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAGTCTGTTCATTTTAT	1	True	NA	NA	False	AATAAA	-29	NA	62318892	62315795	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_62315885_62317105_62317193_62317807_62317901_62318865
H1_mix_00065906	chr3	-	3129	17	ISM	ENSG00000163618.18	ENST00000612439.4	5455	28	338808	0	0	0	3prime_fragment	TRUE	canonical	2	15	junction_14	5.20666639991463	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTGGGTCTGTCTTCCTC	NA	False	NA	NA	False	AATAAA	-24	NA	62536581	62398345	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_62399586_62403080_62403186_62438103_62438212_62445764_62445798_62465366_62465451_62466338_62466414_62474172_62474321_62478260_62478417_62491338_62491481_62492289_62492447_62499161_62499269_62516058_62516183_62516579_62516644_62518148_62518251_62530653_62530813_62532870_62533059_62536444
H1_mix_00065908	chr3	-	8269	8	FSM	ENSG00000163637.13	ENST00000564377.6	8032	8	15	-252	15	252	multi-exon	FALSE	canonical	1	3	junction_7	4.02542937245868	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTAGATGCCAGTAGCAG	40	False	NA	NA	False	NA	NA	NA	64268159	64093617	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_64099926_64146829_64147703_64153181_64153369_64157161_64157366_64159939_64160078_64163015_64163130_64198783_64198968_64267898
H1_mix_00065909	chr3	-	7586	40	FSM	ENSG00000163638.13	ENST00000498707.5	7624	40	31	7	21	-4	multi-exon	FALSE	canonical	2	2	junction_20	2.59899338223868	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAAACCATTTGTGTTTC	62	False	NA	-7	True	AATAAA	-12	NA	64687969	64515660	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_64517122_64522165_64522261_64533165_64533271_64539202_64539295_64541094_64541229_64541319_64541415_64541525_64541621_64541837_64541971_64546757_64546953_64550891_64551063_64561577_64561752_64568367_64568536_64594257_64594435_64596829_64596992_64601943_64602214_64603921_64604090_64604226_64604332_64606959_64607080_64613344_64613510_64615320_64615486_64615959_64616171_64621113_64621241_64622197_64622328_64622419_64622587_64631454_64631551_64631807_64631926_64633471_64633609_64633697_64633880_64641847_64641994_64647939_64648045_64649636_64649779_64651016_64651164_64654352_64654459_64654571_64654613_64655575_64655692_64655791_64655876_64658501_64658792_64681200_64681364_64686567_64686969_64687542
H1_mix_00065910	chr3	-	7791	22	NIC	ENSG00000151276.24	novel	7851	23	NA	NA	0	56	combination_of_known_junctions	FALSE	canonical	3	59	junction_16	39.1281399745564	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGTAATCAATTGAGGGC	16	True	NA	51	True	NA	NA	NA	66038834	65353468	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_65357133_65361198_65361338_65363464_65363609_65364664_65364726_65364852_65364947_65375744_65375949_65379260_65379555_65381876_65382070_65383531_65383624_65391141_65391359_65401438_65401471_65429519_65430141_65430698_65430882_65437154_65437248_65439878_65440013_65442791_65442850_65453257_65453341_65470282_65470485_65478591_65478799_65493511_65493632_65621971_65622089_66037995
H1_mix_00065911	chr3	-	692	6	ISM	ENSG00000114861.24	ENST00000649431.2	1596	12	0	74775	0	1115	5prime_fragment	FALSE	canonical	0	0	junction_2	4.31740662898458	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAACAGGAACAGTTGCA	-18	True	NA	NA	False	TATAAA	-1	NA	71306053	71052602	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_71052627_71053635_71053774_71112535_71112638_71198201_71198393_71299819_71299881_71305877
H1_mix_00065912	chr3	-	728	5	ISM	ENSG00000114861.24	ENST00000649610.2	2657	21	-13	340473	-2	-3	5prime_fragment	FALSE	canonical	2	5	junction_1	4.63680924774785	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACATATGTGGTGTATTTT	218	False	NA	NA	False	AATAAA	-22	NA	71583741	71299697	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_71299881_71359149_71359245_71493425_71493556_71581548_71581698_71583570
H1_mix_00065915	chr3	-	399	3	FSM	ENSG00000113805.9	ENST00000477856.1	560	3	161	0	161	0	multi-exon	FALSE	canonical	2	3	junction_1	1	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTATTGGAAAGTTATT	NA	False	NA	NA	False	NA	NA	NA	74267378	74264384	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_74264502_74266480_74266650_74267265
H1_mix_00065916	chr3	-	293	2	Intergenic	novelGene_906	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75067427	75065268	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_75065495_75067360
H1_mix_00065917	chr3	-	727	6	FSM	ENSG00000244026.7	ENST00000689507.1	2116	6	77	1312	0	-1	multi-exon	FALSE	canonical	3	16	junction_2	83.7338641172137	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTTGGAGAATGTTAAAT	17	False	NA	-37	True	GATAAA	-18	NA	75435048	75422863	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_75423062_75426449_75426600_75429135_75429238_75430831_75430915_75432807_75432871_75434917
H1_mix_00065918	chr3	-	222	1	FSM	ENSG00000272710.2	ENST00000642053.1	222	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGACGCGGGCGCAGG	NA	False	NA	NA	False	NA	NA	NA	75580199	75579977	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_75580000_75580200
H1_mix_00065919	chr3	-	468	1	FSM	ENSG00000243422.3	ENST00000492925.1	468	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGTCCAGCTGGCTAAC	13	False	NA	-107	True	NA	NA	NA	75625153	75624685	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_75624700_75625200
H1_mix_00065920	chr3	-	393	1	FSM	ENSG00000241532.1	ENST00000493675.1	1213	1	271	549	271	-549	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACATTCACCCTGGCAG	NA	False	NA	NA	False	GATAAA	-28	NA	75654502	75654109	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_75654100_75654500
H1_mix_00065921	chr3	-	4090	12	ISM	ENSG00000169855.21	ENST00000464233.6	6927	31	1120148	-77	-13270	77	3prime_fragment	FALSE	canonical	3	142	junction_11	29.1587277664626	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAACATTTCACCCCTGT	NA	False	NA	59	True	NA	NA	NA	78647850	78597161	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_78598928_78600112_78600310_78606732_78607042_78614647_78614801_78617634_78618042_78627320_78627570_78631160_78631306_78633934_78634043_78635772_78636109_78639743_78639899_78646147_78646191_78647628
H1_mix_00065922	chr3	-	481	1	FSM	ENSG00000241095.1	ENST00000492267.1	1507	1	674	352	674	-352	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTAAAACTGTGGCAGGG	NA	False	NA	NA	False	NA	NA	NA	82807347	82806866	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_82806900_82807300
H1_mix_00065923	chr3	-	10349	4	NIC	ENSG00000206538.9	novel	10438	4	NA	NA	-70	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_3	17.931970208417	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACGAGGTTCTTTCTTTG	89	False	NA	-2	True	AATAAA	-16	NA	86991219	86937972	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_86947068_86968589_86969124_86978525_86978644_86990617
H1_mix_00065924	chr3	-	280	1	FSM	ENSG00000241535.1	ENST00000468470.1	561	1	290	-9	290	9	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTGTCACTTCTCTTAG	NA	False	NA	NA	False	AAAACA	-22	NA	88095678	88095398	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_88095400_88095700
H1_mix_00065925	chr3	-	989	1	FSM	ENSG00000269028.3	ENST00000600213.3	1049	1	60	0	60	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTTACTACATACAACTA	40	False	NA	NA	False	NA	NA	NA	96618176	96617187	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_96617200_96618200
H1_mix_00065926	chr3	-	2156	2	FSM	ENSG00000286447.1	ENST00000657027.1	2638	2	0	482	0	10	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATACACACACAAAGATGCA	NA	False	NA	NA	False	NA	NA	NA	96813682	96811322	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_96813111_96813314
H1_mix_00065928	chr3	-	1882	9	NIC	ENSG00000170854.18	novel	4854	10	NA	NA	2	-66	intron_retention	FALSE	canonical	3	86	junction_3	10.5593560409714	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAAAGGAAAGCCTGGTA	0	True	NA	NA	False	NA	NA	NA	97972429	97945242	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_97945888_97947360_97947450_97949843_97950016_97950785_97950889_97954391_97954496_97959050_97959180_97961588_97961709_97967161_97967633_97972380
H1_mix_00065929	chr3	-	563	3	FSM	ENSG00000289509.1	ENST00000688712.1	580	3	14	3	14	0	multi-exon	FALSE	canonical	1	1	junction_1	1.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTTGTCTTATAACTAT	-3	True	NA	NA	False	AATAAA	-16	NA	98325171	98262716	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_98263143_98277417_98277476_98325092
H1_mix_00065930	chr3	-	2410	4	FSM	ENSG00000239445.6	ENST00000654439.1	4498	4	0	2088	0	-49	multi-exon	FALSE	canonical	1	2	junction_1	0.471404520791032	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGCGCTCACGATTGC	1246	False	NA	-92	True	NA	NA	NA	98732455	98713372	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_98715522_98715649_98715778_98718418_98718522_98732425
H1_mix_00065932	chr3	-	825	2	FSM	ENSG00000154174.8	ENST00000483945.1	905	2	80	0	80	0	multi-exon	FALSE	canonical	3	276	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTTTCTTTCTTAAAGC	NA	False	NA	NA	False	AATAAA	-16	NA	100373645	100372005	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_100372723_100373537
H1_mix_00065933	chr3	-	618	1	FSM	ENSG00000282978.1	ENST00000635481.1	492	1	1	-127	1	127	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCCTTTGGACACTGCA	NA	False	NA	NA	False	GATAAA	-27	NA	101457731	101457113	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_101457100_101457700
H1_mix_00065934	chr3	-	577	2	Genic_Genomic	ENSG00000242299.1	novel	459	1	NA	NA	-50	15154	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTCTAATCCTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	101576997	101561334	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr3_-_101561362_101576447
H1_mix_00065935	chr3	-	402	1	FSM	ENSG00000243396.1	ENST00000477747.1	402	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGACAGCTTATGTGCACG	NA	False	NA	NA	False	NA	NA	NA	101599644	101599242	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_101599200_101599600
H1_mix_00065937	chr3	-	3859	19	NNC	ENSG00000114423.23	novel	6749	19	NA	NA	-1	47421	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	41.5819880284128	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTGCCCAATCATACTC	1	True	NA	NA	False	AAAAAG	-3	NA	105869040	105608039	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_105608065_105658271_105659230_105670232_105670353_105678430_105678572_105681723_105681819_105685319_105685467_105693493_105693589_105702093_105702460_105703987_105704174_105720046_105720251_105734008_105734141_105737170_105737259_105740493_105740632_105745916_105746039_105751461_105751619_105776395_105776543_105853413_105853665_105867409_105867592_105868735
H1_mix_00065939	chr3	-	3488	4	NNC	ENSG00000121570.13	novel	3043	2	NA	NA	267	47269	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1917.67359057792	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTTTCCTCAAGGCTGT	7093	False	NA	NA	False	NA	NA	NA	109330493	109278874	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_109278900_109326145_109328025_109328889_109330313_109330332
H1_mix_00065940	chr3	-	2810	8	NNC	ENSG00000121570.13	novel	2788	7	NA	NA	0	47269	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1185.85043968711	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTTTCCTCAAGGCTGT	1	True	NA	NA	False	NA	NA	NA	109337545	109278874	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_109278900_109326145_109328025_109328889_109329089_109330523_109330813_109331733_109331785_109331870_109332032_109333869_109333994_109337463
H1_mix_00065941	chr3	-	1450	9	NNC	ENSG00000163530.4	novel	1383	9	NA	NA	1481	4	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	15.0701484730576	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGTGTGTGTTAAAGATC	1473	False	NA	-3	True	AATAAA	-26	NA	109315036	109293783	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_109294005_109300370_109300436_109304474_109304671_109308031_109308294_109309025_109309080_109309169_109309331_109312544_109312693_109314509_109314556_109314739
H1_mix_00065945	chr3	-	3557	8	FSM	ENSG00000091986.16	ENST00000439685.6	3557	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	17.1357127969987	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAGCTTTTTCTTATTT	-1	True	NA	NA	False	TATAAA	-18	NA	112641300	112605100	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_112605764_112607175_112607257_112609977_112610082_112616709_112616859_112618967_112619105_112630112_112630270_112638027_112639917_112640923
H1_mix_00065946	chr3	-	4672	7	FSM	ENSG00000163608.15	ENST00000383675.6	4672	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	49.1169239898247	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGATTTGTTGGCCTCTTT	NA	False	NA	-5	True	ATTAAA	-18	NA	113019733	113002443	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_113006005_113008170_113008431_113010642_113010705_113011044_113011407_113013952_113014033_113017447_113017603_113019541
H1_mix_00065947	chr3	-	4568	7	NIC	ENSG00000163608.15	novel	2056	8	NA	NA	6	-2	combination_of_known_junctions	TRUE	canonical	1	3	junction_2	48.9946142164853	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGATTTGTTGGCCTCT	82	False	NA	-7	True	ATTAAA	-16	NA	113019638	113002445	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_113006005_113008170_113008431_113011044_113011407_113012733_113012812_113013271_113013404_113013952_113014033_113019541
H1_mix_00065948	chr3	-	1512	4	FSM	ENSG00000163608.15	ENST00000469809.5	1512	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	62.0053761110008	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCTCATATTAAAGTGAG	6	True	NA	-50	True	NA	NA	NA	113019658	113004953	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_113006005_113008170_113008431_113013948_113014033_113019541
H1_mix_00065950	chr3	-	301	2	FSM	ENSG00000206530.11	ENST00000484923.1	721	2	420	0	420	0	multi-exon	FALSE	canonical	2	3	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGATTTCTGACATAACTC	8419	False	NA	NA	False	NA	NA	NA	113294036	113291532	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_113291749_113293951
H1_mix_00065953	chr3	-	480	1	FSM	ENSG00000240776.1	ENST00000485426.1	495	1	-3	18	-3	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCAGCCACCTCAGTAAAA	34	False	NA	NA	False	TTTAAA	-22	NA	113850734	113850254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_113850300_113850700
H1_mix_00065954	chr3	-	336	1	FSM	ENSG00000174255.8	ENST00000482457.4	2948	1	1194	1418	1194	-1413	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTCAACGTCAGAGAACTT	1178	False	NA	NA	False	GATAAA	-45	NA	114236384	114236048	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_114236000_114236400
H1_mix_00065955	chr3	-	3176	10	NNC	ENSG00000176142.13	novel	4853	9	NA	NA	0	4276	intron_retention	FALSE	non_canonical	0	0	junction_1	55.7277331937482	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCAGGTGTGGTGGCAG	13	True	NA	NA	False	ACTAAA	-33	NA	119463615	119424672	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_119424700_119430652_119432215_119434761_119434883_119436790_119436979_119437754_119438104_119447017_119447173_119452446_119452531_119458017_119458241_119461961_119462149_119463335
H1_mix_00065956	chr3	-	504	1	FSM	ENSG00000272662.1	ENST00000609598.1	504	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTCAATATTCGTGTAA	NA	False	NA	NA	False	ATTAAA	-17	NA	119498181	119497677	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_119497700_119498200
H1_mix_00065957	chr3	-	1816	7	FSM	ENSG00000121594.12	ENST00000264246.8	2737	7	7	914	7	-914	multi-exon	TRUE	canonical	1	2	junction_1	1.15470053837925	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTTACCCAGTATTCC	7	True	NA	NA	False	NA	NA	NA	119559607	119525206	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_119525750_119527732_119527842_119529841_119529938_119537136_119537419_119544549_119544868_119557628_119557929_119559439
H1_mix_00065958	chr3	-	1495	6	FSM	ENSG00000121594.12	ENST00000478182.5	1491	6	0	-4	0	4	multi-exon	FALSE	canonical	1	2	junction_3	1.16619037896906	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAATATTCCTGTGGTA	3097	False	NA	-5	True	ATTAAA	-17	NA	119559556	119527459	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_119527842_119529841_119529938_119537136_119537419_119544549_119544868_119557628_119557929_119559439
H1_mix_00065959	chr3	-	534	1	FSM	ENSG00000242052.1	ENST00000495649.1	625	1	64	27	64	-27	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAAGTGGTGGGCCCTGCA	7160	False	NA	NA	False	NA	NA	NA	119636086	119635552	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_119635600_119636100
H1_mix_00065960	chr3	-	565	6	FSM	ENSG00000163430.12	ENST00000469005.1	565	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	915.463030384078	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGGCAGCAACTACAGTG	1	True	NA	NA	False	NA	NA	NA	120450991	120409574	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_120409663_120410951_120410985_120411853_120411984_120415922_120416028_120450683_120450798_120450896
H1_mix_00065962	chr3	-	7092	15	ISM	ENSG00000051341.15	ENST00000264233.6	8757	30	54617	-5	-9775	5	3prime_fragment	FALSE	canonical	3	47	junction_3	14.0864676703768	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAACAATTGTTTTGTTA	NA	False	NA	-7	True	AATAAA	-22	NA	121491371	121431425	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_121432418_121432917_121433034_121436121_121436276_121439991_121440117_121449314_121449427_121460049_121460235_121467518_121467641_121468304_121468432_121471989_121472165_121473349_121473488_121476539_121476734_121481571_121481813_121483385_121483583_121485040_121485185_121487301
H1_mix_00065964	chr3	-	1496	9	FSM	ENSG00000180353.11	ENST00000473883.5	2710	9	1202	12	1202	-12	multi-exon	FALSE	canonical	1	2	junction_8	3.01817411691241	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTCACCTGTATGCTGAG	NA	False	NA	-13	True	AATAAA	-10	NA	121642981	121631411	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_121631983_121632100_121632185_121632331_121632564_121633066_121633172_121634206_121634419_121635734_121635805_121636433_121636490_121637145_121637257_121642926
H1_mix_00065967	chr3	-	1919	12	FSM	ENSG00000173226.17	ENST00000349820.10	1919	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	78.9880208513704	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTCAGGATTATTTCAAC	-2	True	NA	0	True	AATAAA	-26	NA	121835034	121769993	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_121770575_121772556_121772714_121781742_121781875_121788283_121788433_121790072_121790216_121807343_121807444_121808915_121809010_121826050_121826181_121828469_121828633_121828860_121828973_121834390_121834480_121834965
H1_mix_00065968	chr3	-	2953	10	ISM	ENSG00000138496.17	ENST00000471785.5	3040	11	4532	-44	4532	0	3prime_fragment	TRUE	canonical	3	10	junction_1	4.90904934097212	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTAGGTATGAAAATAAAT	5071	False	NA	-37	True	TATAAA	-4	NA	122559710	122527960	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_122528744_122536167_122536343_122536933_122537074_122540471_122540853_122545431_122545490_122550583_122550803_122552417_122552640_122555285_122556122_122558433_122558468_122559605
H1_mix_00065969	chr3	-	4684	3	ISM	ENSG00000169087.11	ENST00000306103.3	1964	8	37735	-190	12646	190	intron_retention	FALSE	canonical	3	62	junction_2	7	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAACAGCTGCAGAATTCT	2799	False	NA	NA	False	NA	NA	NA	122756096	122739808	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_122740876_122741002_122741114_122752590
H1_mix_00065970	chr3	-	4713	24	NNC	ENSG00000082684.16	novel	4855	23	NA	NA	0	4811	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27.2675603743948	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCCCTAGAGCCTCAGG	-8	True	NA	NA	False	NA	NA	NA	123027711	122904270	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_122904297_122909197_122910302_122910839_122911046_122911490_122911536_122911919_122912070_122912171_122912343_122912842_122913062_122913198_122913425_122913533_122913682_122913857_122914002_122915439_122915622_122915772_122915891_122921914_122922123_122922239_122922448_122923616_122923753_122926391_122926678_122927789_122928004_122928516_122928616_122928995_122929059_122939424_122939471_122943435_122943536_122948505_122948710_122961139_122961302_123027463
H1_mix_00065973	chr3	-	1719	10	NNC	ENSG00000175455.16	novel	4131	13	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_8	74.2278773627387	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATACACCTTTTTTTGTT	3	True	NA	NA	False	AATAAA	-21	NA	123961229	123933526	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_123933756_123944848_123944991_123946802_123947320_123948690_123948786_123948895_123949133_123955842_123955966_123956045_123956116_123956354_123956428_123956648_123956796_123961143
H1_mix_00065976	chr3	-	490	4	FSM	ENSG00000082781.12	ENST00000476988.2	492	4	2	0	2	0	multi-exon	FALSE	canonical	2	21	junction_3	555.268903825485	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTCATCAGTTTCTTCC	8396	False	NA	NA	False	NA	NA	NA	124833018	124817620	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_124817711_124819738_124819835_124821312_124821475_124832876
H1_mix_00065977	chr3	-	1155	7	FSM	ENSG00000082781.12	ENST00000465464.5	1164	7	9	0	9	0	multi-exon	FALSE	canonical	2	2	junction_4	638.194175432176	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCATCCAACCAGATGGT	NA	False	NA	NA	False	NA	NA	NA	124887818	124821330	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_124821475_124841382_124841552_124848308_124848559_124857231_124857314_124859241_124859447_124873445_124873532_124887599
H1_mix_00065978	chr3	-	779	5	FSM	ENSG00000082781.12	ENST00000608657.5	825	5	46	0	-28	0	multi-exon	FALSE	canonical	3	114	junction_4	536.023495287287	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCTTTGATGCAGTACTC	5346	False	NA	NA	False	NA	NA	NA	124901372	124841420	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_124841552_124848308_124848559_124859241_124859447_124873445_124873532_124901265
H1_mix_00065979	chr3	-	215	1	FSM	ENSG00000243986.2	ENST00000484903.2	1224	1	618	391	618	-391	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAGCAGGATGTTGGGA	NA	False	NA	NA	False	NA	NA	NA	124862699	124862484	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_124862500_124862700
H1_mix_00065982	chr3	-	5372	14	Fusion	ENSG00000252965.1_ENSG00000144909.8	novel	4598	13	NA	NA	-92	1481	multi-exon	TRUE	non_canonical	0	0	junction_1	41.1037077755694	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCCAAGACTGAAAGTAACA	NA	False	NA	NA	False	NA	NA	NA	125595589	125526762	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr3_-_125526795_125528207_125530581_125531860_125532015_125538450_125538634_125547405_125547593_125552180_125552680_125560378_125560520_125563697_125563844_125567393_125567596_125576188_125576366_125578959_125579040_125579864_125580041_125582909_125582979_125594636
H1_mix_00065983	chr3	-	219	1	FSM	ENSG00000239804.1	ENST00000486999.1	259	1	228	-188	228	188	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCACTTCCATTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	125787918	125787699	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_125787700_125787900
H1_mix_00065984	chr3	-	312	2	FSM	ENSG00000241288.8	ENST00000617582.1	289	2	0	-23	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTGTCTTGCCTGATG	NA	False	NA	-1	True	GATAAA	-15	NA	125861799	125827239	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_125827456_125861703
H1_mix_00065985	chr3	-	519	3	FSM	ENSG00000241288.8	ENST00000594843.1	502	3	0	-17	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTGTCTTGCCTGATG	NA	False	NA	-1	True	GATAAA	-15	NA	125886077	125827239	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_125827456_125873740_125873846_125885879
H1_mix_00065987	chr3	-	1771	2	NIC	ENSG00000248787.2	novel	981	6	NA	NA	583	-1288	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGCCCGAAATCTCTGA	NA	False	NA	NA	False	NA	NA	NA	125915777	125909292	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_125910939_125915652
H1_mix_00065988	chr3	-	4491	6	FSM	ENSG00000114544.17	ENST00000506102.5	2351	6	-2069	-71	-43	65	multi-exon	FALSE	canonical	3	74	junction_3	6.08604962188118	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCATTTCTCTAGTGCA	NA	False	NA	36	True	TATAAA	-12	NA	126025833	126006291	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_126007226_126008731_126008881_126012614_126012750_126015493_126015574_126016730_126016876_126022785
H1_mix_00065989	chr3	-	1743	12	FSM	ENSG00000114544.17	ENST00000315891.10	1797	12	135	-81	0	65	multi-exon	FALSE	canonical	3	12	junction_1	21.7057710267977	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCATTTCTCTAGTGCA	127	False	NA	36	True	TATAAA	-12	NA	126084169	126006291	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_126006565_126007113_126007226_126008731_126008881_126012614_126012750_126015493_126015574_126016730_126016876_126022785_126022933_126026334_126026480_126033606_126033679_126050942_126051051_126067946_126068247_126084092
H1_mix_00065991	chr3	-	3070	23	FSM	ENSG00000144908.14	ENST00000393434.7	3064	23	0	-6	0	-2	multi-exon	FALSE	canonical	0	0	junction_10	3.29913587484074	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATCTCTGCGTTTCTCTGC	-4	True	NA	NA	False	AATAAA	-22	NA	126180586	126103563	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_126103847_126105725_126105926_126107140_126107247_126109943_126110110_126112781_126112881_126114556_126114657_126118004_126118099_126124363_126124452_126125615_126125722_126130222_126130294_126131383_126131535_126135534_126135663_126136763_126136884_126137812_126137961_126146834_126146927_126150405_126150532_126153443_126153582_126154553_126154644_126155401_126155504_126157342_126157509_126158404_126158640_126160852_126161003_126180475
H1_mix_00065992	chr3	-	2351	15	FSM	ENSG00000197763.20	ENST00000523403.3	2351	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	18.6034065346613	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTGGTTTTCTAGTGCGT	16	True	NA	41	True	TATAAA	-1	NA	126655101	126607488	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_126607974_126608498_126608634_126611036_126611133_126621741_126621899_126622463_126622541_126629378_126629472_126630711_126630938_126631763_126631880_126633908_126634052_126642031_126642152_126643980_126644054_126644296_126644402_126646110_126646221_126647235_126647297_126654747
H1_mix_00065993	chr3	-	1725	9	NIC	ENSG00000163870.16	novel	1831	10	NA	NA	-11	-3	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	78.8447842282544	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGTGCTAATGTGGAGGT	6	True	NA	-22	True	AATAAA	-15	NA	127590718	127573071	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_127573789_127575184_127575266_127575402_127575506_127576616_127576697_127576820_127576894_127576989_127577077_127579739_127579873_127580021_127580164_127590409
H1_mix_00065995	chr3	-	4225	8	FSM	ENSG00000074416.16	ENST00000398104.6	4256	8	21	10	21	-6	multi-exon	FALSE	canonical	0	0	junction_1	1.88441513689613	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGAATGGCGTCTGTCTGT	-19	True	NA	-4	True	AATAAA	-11	NA	127823250	127689071	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_127692324_127694974_127695191_127710575_127710666_127721052_127721164_127722429_127722567_127781788_127781896_127821693_127821839_127823083
H1_mix_00065996	chr3	-	3990	1	FSM	ENSG00000175792.12	ENST00000582176.1	4062	1	160	-88	160	-63	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATAGCACATTTGTCACCG	9814	False	NA	79	True	NA	NA	NA	128084862	128080872	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_128080900_128084900
H1_mix_00065997	chr3	-	760	1	FSM	ENSG00000242992.3	ENST00000480365.1	553	1	10	-217	10	217	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGGTCGAGGCTGTCAC	208	False	NA	NA	False	AAGAAA	-43	NA	128765008	128764248	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_128764200_128765000
H1_mix_00065998	chr3	-	408	1	FSM	ENSG00000239483.1	ENST00000472521.1	361	1	356	-403	356	403	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATGTTTACCTAAAGCA	NA	False	NA	NA	False	AATAAA	-28	NA	128798845	128798437	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_128798400_128798800
H1_mix_00065999	chr3	-	1755	1	FSM	ENSG00000261159.1	ENST00000567253.1	811	1	-1019	75	-1019	-75	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTTCGTTGCTCAGCC	NA	False	NA	-78	True	AATAAA	-13	NA	128861545	128859790	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_128859800_128861500
H1_mix_00066000	chr3	-	2234	1	Genic_Genomic	ENSG00000287110.2_ENSG00000231305.4	novel	NA	NA	NA	NA	-728	1878	mono-exon	FALSE	NA	NA	NA	NA	NA	253	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGCAGTGTAGATCATAG	7151	False	NA	NA	False	NA	NA	NA	128872268	128870034	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr3_-_128870000_128872300
H1_mix_00066001	chr3	-	2966	1	FSM	ENSG00000279507.1	ENST00000624189.1	228	1	-1024	-1714	-1024	1714	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCTAACAGTACACAGATT	NA	False	NA	NA	False	ATTAAA	-37	NA	128916084	128913118	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_128913100_128916100
H1_mix_00066002	chr3	-	5895	8	FSM	ENSG00000114656.13	ENST00000265068.9	6034	8	33	106	-6	-106	multi-exon	FALSE	canonical	1	3	junction_7	7.29830844253989	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGCTGAGGCAGGAGAAT	-8	True	NA	NA	False	NA	NA	NA	128994082	128966694	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_128971434_128975778_128975904_128976978_128977067_128978044_128978186_128987615_128987830_128988727_128988919_128993042_128993337_128993979
H1_mix_00066003	chr3	-	1627	4	FSM	ENSG00000172780.17	ENST00000476465.5	1627	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	93.1032879238012	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTCTGTGTAGCTTCT	5	True	NA	NA	False	NA	NA	NA	129121781	129090493	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_129091347_129092499_129092594_129094985_129095170_129121285
H1_mix_00066004	chr3	-	253	1	FSM	ENSG00000286729.1	ENST00000652851.1	1030	1	726	51	726	-51	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGCATGAGTCTGCAGAA	NA	False	NA	NA	False	NA	NA	NA	129278056	129277803	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_129277800_129278100
H1_mix_00066005	chr3	-	4145	3	NNC	ENSG00000251474.7	novel	593	2	NA	NA	-391	-1478	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	4.5	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATACAGAAAGTAAGAACTT	2746	False	NA	NA	False	NA	NA	NA	129396684	129386879	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_129390396_129393634_129393796_129396216
H1_mix_00066007	chr3	-	4724	20	ISM	ENSG00000004399.13	ENST00000324093.9	6913	36	-99	13906	-99	69	5prime_fragment	FALSE	canonical	3	35	junction_8	9.3159381492745	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCCACCATGGGCAGGCA	0	True	NA	43	True	NA	NA	NA	129606775	129569119	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_129569958_129570785_129570936_129571039_129571304_129571508_129571600_129571676_129571845_129572608_129572749_129572841_129572942_129573593_129573746_129574335_129574491_129575468_129575563_129575765_129575856_129578328_129578434_129583566_129583670_129584124_129584234_129584384_129584563_129585951_129586082_129586171_129586273_129586587_129586720_129589350_129589528_129605328
H1_mix_00066008	chr3	-	921	4	NIC	ENSG00000253540.6	novel	930	5	NA	NA	0	84	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	1.69967317119759	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACAAAGCCAAGCTCGCT	-9	True	NA	NA	False	NA	NA	NA	130111487	130098880	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_130099359_130104165_130104298_130105529_130105632_130111278
H1_mix_00066009	chr3	-	216	1	FSM	ENSG00000248618.1	ENST00000509123.1	241	1	87	-62	87	62	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGTCAGCTCTAGGGAGGC	NA	False	NA	NA	False	NA	NA	NA	130167943	130167727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_130167700_130167900
H1_mix_00066011	chr3	-	640	4	FSM	ENSG00000114686.9	ENST00000510043.1	640	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	608.101599698238	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATTACCACATTAAATA	NA	False	NA	-75	True	ATTAAA	-10	NA	131471334	131462553	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_131462876_131468090_131468169_131469695_131469774_131471172
H1_mix_00066012	chr3	-	809	1	FSM	ENSG00000242899.1	ENST00000479738.1	738	1	6	-77	6	77	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACCAAAAAGTATTATTAAG	25	False	NA	NA	False	AATAAA	-33	NA	132244259	132243450	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_132243400_132244300
H1_mix_00066016	chr3	-	1559	1	ISM	ENSG00000240086.7	ENST00000653803.1	1974	4	83503	18	83497	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAACATTTATATATAAGT	NA	False	NA	NA	False	AATAAA	-7	NA	135356361	135354802	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_135354800_135356400
H1_mix_00066017	chr3	-	5951	33	FSM	ENSG00000118007.13	ENST00000236698.9	5951	33	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	20.8917410416174	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTGTGGTAGTCATCCTA	6	True	NA	-2	True	AATAAA	-14	NA	136752378	136336235	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_136338278_136338369_136338451_136340490_136340606_136343831_136344007_136349157_136349364_136357719_136357849_136359147_136359297_136363365_136363468_136366942_136367083_136369107_136369283_136377659_136377753_136398748_136398830_136417884_136417973_136421092_136421164_136422409_136422614_136422767_136422858_136422951_136423045_136433555_136433660_136443286_136443405_136452032_136452148_136464880_136464989_136472412_136472493_136473538_136473638_136477288_136477413_136500222_136500297_136502627_136502780_136521212_136521418_136542118_136542196_136568764_136568862_136604308_136604474_136623145_136623249_136630869_136630982_136752194
H1_mix_00066018	chr3	-	744	1	FSM	ENSG00000240695.1	ENST00000468074.1	730	1	-14	0	-14	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGACCACCCGGGGTCA	2259	False	NA	NA	False	AGTAAA	-13	NA	136737243	136736499	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_136736500_136737200
H1_mix_00066019	chr3	-	1721	1	FSM	ENSG00000273486.1	ENST00000609553.1	1684	1	-50	13	-50	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCACCCAAGAAGCCAATT	NA	False	NA	NA	False	ACTAAA	-3	NA	136839071	136837350	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_136837400_136839100
H1_mix_00066022	chr3	-	768	1	FSM	ENSG00000240668.1	ENST00000489121.1	1440	1	599	73	599	-73	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGTTGTGAAGAAGATAG	5952	False	NA	NA	False	NA	NA	NA	138102318	138101550	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_138101600_138102300
H1_mix_00066023	chr3	-	4888	23	NIC	ENSG00000051382.9	novel	6259	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_12	51.909488933357	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAGCCTCTTCTTTATGG	25	False	138834953	-3	True	AATAAA	-33	NA	138834928	138654017	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_138655527_138656141_138656275_138657689_138657836_138663905_138664030_138665035_138665204_138681966_138682046_138683677_138683788_138684624_138684804_138688874_138688975_138690999_138691144_138694785_138694908_138698906_138699096_138707158_138707290_138712207_138712305_138714467_138714720_138733360_138733439_138734633_138734805_138737706_138737887_138742557_138742782_138755753_138755980_138759172_138759360_138796462_138796568_138834694
H1_mix_00066024	chr3	-	211	1	FSM	ENSG00000272656.1	ENST00000608472.1	348	1	80	57	80	-57	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCAAATCGTTTTCTAAC	NA	False	NA	NA	False	AATATA	-22	NA	139349291	139349080	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_139349100_139349300
H1_mix_00066025	chr3	-	6873	23	FSM	ENSG00000184432.11	ENST00000677073.1	6872	23	0	-1	0	1	multi-exon	FALSE	canonical	3	10	junction_21	274.787900927002	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCGTTGCTCTAATTT	6	True	NA	-2	True	AATAAA	-17	NA	139389648	139353944	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_139357959_139358199_139358272_139358743_139358813_139358997_139359179_139359269_139359363_139361080_139361296_139362406_139362518_139366567_139366776_139367014_139367146_139368144_139368289_139369260_139369368_139369455_139369545_139371722_139371834_139373212_139373413_139373665_139373809_139374488_139374589_139375467_139375615_139378040_139378190_139379046_139379174_139379379_139379467_139379771_139379908_139383297_139383436_139389547
H1_mix_00066026	chr3	-	3221	22	FSM	ENSG00000184432.11	ENST00000507777.6	3221	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	210.634071361071	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTTTCTTGACCTCATT	-22	False	NA	-5	True	NA	NA	NA	139389676	139357405	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_139357959_139358199_139358272_139358743_139358813_139358997_139359179_139359269_139359363_139361080_139361296_139362406_139362518_139366567_139366776_139367014_139367146_139368144_139368289_139369260_139369368_139369455_139369545_139371722_139371834_139373212_139373413_139373665_139373809_139374488_139374589_139375467_139375615_139378040_139378190_139379046_139379174_139379379_139379467_139383297_139383436_139389630
H1_mix_00066028	chr3	-	237	1	FSM	ENSG00000249986.1	ENST00000508556.1	304	1	108	-41	108	41	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACCTTTTTACACATCT	NA	False	NA	NA	False	AATACA	-28	NA	141600471	141600234	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_141600200_141600500
H1_mix_00066029	chr3	-	1379	12	NNC	ENSG00000114126.18	novel	2360	11	NA	NA	7	69648	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	175.723063487188	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGGAAGTAGTTAACTAT	539	False	NA	NA	False	NA	NA	NA	142028639	141874779	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_141874814_141952487_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974192_141978519_141978683_141993537_141993586_141995019_141995142_142005440_142005545_142028578
H1_mix_00066031	chr3	-	9093	1	FSM	ENSG00000188582.10	ENST00000340634.6	9090	1	0	-3	0	3	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGGATCGTACACATCTG	-3	True	NA	NA	False	AATAAA	-19	NA	142963674	142954581	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_142954600_142963700
H1_mix_00066032	chr3	-	2506	9	ISM	ENSG00000181804.15	ENST00000316549.11	3564	16	274293	0	123974	0	3prime_fragment	FALSE	canonical	2	4	junction_5	3.56195171219375	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTGTTTGGCTAATGC	NA	False	NA	NA	False	AATAAA	-17	NA	143574175	143265221	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_143266930_143268874_143268981_143363483_143363564_143382059_143382115_143467036_143467191_143493652_143493765_143495334_143495449_143552361_143552451_143574087
H1_mix_00066033	chr3	-	714	2	FSM	ENSG00000181804.15	ENST00000498717.2	712	2	0	-2	0	2	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTCTTTATGCAGTACT	-9	True	NA	NA	False	AATAAA	-18	NA	143848469	143847591	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_143847984_143848147
H1_mix_00066034	chr3	-	521	1	FSM	ENSG00000239797.1	ENST00000463605.1	483	1	-25	-13	-25	13	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTAATTTATTGAGAGTTT	14	False	NA	NA	False	NA	NA	NA	145824764	145824243	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_145824200_145824800
H1_mix_00066035	chr3	-	3000	7	FSM	ENSG00000114698.15	ENST00000383083.6	3033	7	37	-4	1	0	multi-exon	FALSE	canonical	1	1	junction_3	5.74456264653803	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTTTATTTTTTGACT	0	True	NA	56	True	AATAAA	-23	NA	146251142	146192334	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_146194456_146195123_146195283_146196631_146196794_146206525_146206762_146220814_146220926_146222064_146222093_146250959
H1_mix_00066036	chr3	-	726	4	NNC	ENSG00000241358.1	novel	705	5	NA	NA	4853	54974	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1694.72757561667	352	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGTTTCCATAGTAGGAA	NA	False	NA	NA	False	NA	NA	NA	146411724	146336388	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_146336421_146391362_146391563_146395759_146395922_146411392
H1_mix_00066037	chr3	-	674	4	NNC	ENSG00000163746.12	novel	574	4	NA	NA	48350	55032	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1694.72757561667	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGTTTCCATAGTAGGAA	NA	False	NA	NA	False	NA	NA	NA	146411724	146336388	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_146336424_146391417_146391563_146395759_146395922_146411392
H1_mix_00066039	chr3	-	787	4	NNC	ENSG00000163746.12	novel	574	4	NA	NA	48350	55032	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1401.80906926253	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGTTTCCATAGTAGGAA	NA	False	NA	NA	False	NA	NA	NA	146411724	146336388	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_146336424_146391419_146391563_146395759_146395922_146411277
H1_mix_00066040	chr3	-	701	6	FSM	ENSG00000188313.13	ENST00000463777.5	701	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	221.432969541575	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAACTGCTTTGAATTAT	-5	True	NA	-21	True	AAAAAG	-40	NA	146544555	146515801	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_146516102_146517005_146517168_146525604_146525648_146533469_146533551_146536539_146536566_146544466
H1_mix_00066041	chr3	-	1468	9	NIC	ENSG00000188313.13	novel	1976	9	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	1	4	junction_3	155.132554207684	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAAACTGCTTTGAATTA	5	True	NA	-22	True	AAAAAG	-39	NA	146544726	146515802	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_146516102_146517005_146517168_146521543_146521702_146521832_146522054_146525604_146525648_146528613_146528832_146533469_146533551_146536539_146536566_146544466
H1_mix_00066042	chr3	-	410	2	FSM	ENSG00000047457.14	ENST00000474204.1	712	2	302	0	302	0	multi-exon	FALSE	canonical	2	6	junction_1	0	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGATTCATACAGTCTAAT	NA	False	NA	NA	False	AATAAA	-1	NA	149176412	149173483	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_149173731_149176249
H1_mix_00066043	chr3	-	589	3	FSM	ENSG00000047457.14	ENST00000497797.5	606	3	17	0	17	0	multi-exon	FALSE	canonical	1	1	junction_2	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAATCTCACTGGTTATTT	9530	False	NA	NA	False	AATAAA	-22	NA	149199804	149187918	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_149188203_149198366_149198579_149199711
H1_mix_00066044	chr3	-	942	3	FSM	ENSG00000070087.15	ENST00000460404.5	942	3	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_2	442	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGCTTCCATCTTTTTT	-7	True	NA	NA	False	NA	NA	NA	149970904	149965688	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_149966265_149968357_149968544_149970724
H1_mix_00066047	chr3	-	250	3	FSM	ENSG00000138271.6	ENST00000260843.5	1493	3	142	1101	142	-1101	multi-exon	FALSE	canonical	1	1	junction_1	0	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACAATTCAGGCAACAGGA	308	False	NA	NA	False	NA	NA	NA	151316678	151295186	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_151295212_151300066_151300199_151316585
H1_mix_00066049	chr3	-	1333	5	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	208.233042526877	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTCTTGCATAACTTT	-4	False	NA	-12	True	AATAAA	-34	NA	155280499	155226743	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr3_-_155227446_155258618_155258683_155265037_155265159_155278366_155278560_155280246
H1_mix_00066050	chr3	-	574	3	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	28	junction_2	48.5	240	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTTTTTCAACAAATGCA	7	False	NA	-51	True	NA	NA	NA	155280488	155250558	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr3_-_155250827_155258618_155258683_155280246
H1_mix_00066051	chr3	-	2235	1	Intergenic	novelGene_955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAAGCCTATTTGGTGGT	3782	False	NA	-3	True	AATAAA	-16	NA	155276713	155274478	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_155274500_155276700
H1_mix_00066052	chr3	-	781	3	FSM	ENSG00000240045.2	ENST00000489090.2	783	3	0	2	0	-2	multi-exon	FALSE	canonical	1	2	junction_2	0.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGTTGGTAAGACTGTG	-2	True	NA	NA	False	AATAAA	-15	NA	155293683	155290228	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_155290847_155290939_155291039_155293619
H1_mix_00066053	chr3	-	7479	23	NNC	ENSG00000114805.18	novel	6417	23	NA	NA	21	1137	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	30.3338176935869	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCACACATGAAAAAACTGAG	6	True	NA	NA	False	ATTAAA	-12	NA	155745050	155478743	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_155483052_155485355_155485711_155488027_155488108_155488659_155488807_155490783_155490869_155492728_155492854_155494140_155494249_155494337_155494518_155497319_155497418_155500702_155500795_155504554_155504627_155514722_155514885_155549786_155549959_155554075_155554197_155564914_155565119_155568230_155568325_155583471_155583643_155586064_155586193_155593938_155594185_155596231_155596379_155704145_155704265_155705673_155705728_155744839
H1_mix_00066054	chr3	-	1585	1	FSM	ENSG00000214919.3	ENST00000399242.3	1585	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGAGCTGTGAGTCCTGA	1330	False	NA	NA	False	AATAAA	-24	NA	155743726	155742141	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_155742100_155743700
H1_mix_00066055	chr3	-	663	2	NNC	ENSG00000114805.18	novel	6417	23	NA	NA	6	-253279	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	0	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAAAACCCAACT	-9	True	NA	NA	False	ATTAAA	-17	NA	155745065	155744020	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_155744458_155744839
H1_mix_00066056	chr3	-	1577	3	NIC	ENSG00000174928.16	novel	1811	5	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	30	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCAAAGTAGCTTTTTTC	26	False	NA	-11	True	AATAAA	-19	NA	155806252	155762616	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_155763919_155767508_155767670_155806138
H1_mix_00066058	chr3	-	1432	1	FSM	ENSG00000272990.1	ENST00000609190.1	508	1	-533	-391	-533	391	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTCAATTCACTGCTAAT	2080	False	NA	NA	False	AAGAAA	-43	NA	156524780	156523348	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_156523300_156524800
H1_mix_00066062	chr3	-	1155	6	ISM	ENSG00000197415.12	ENST00000392832.6	3044	14	135073	4569	0	-4569	internal_fragment	FALSE	canonical	2	12	junction_3	2.33238075793812	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCACCAATAGCTAAACGTT	NA	False	NA	NA	False	NA	NA	NA	157364481	157265477	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_157265663_157286556_157286675_157313620_157313756_157317061_157317202_157363363_157363762_157364302
H1_mix_00066063	chr3	-	1401	4	ISM	ENSG00000197415.12	ENST00000494677.5	1714	5	4024	103	4	0	3prime_fragment	FALSE	canonical	3	34	junction_2	7.11805216802087	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTCTCCTTGTCTTCTTTT	2	True	NA	-10	True	AATGAA	-29	NA	157499550	157459621	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_157460356_157470313_157470530_157495211_157495507_157499394
H1_mix_00066064	chr3	-	583	3	FSM	ENSG00000197415.12	ENST00000482434.1	779	3	196	0	196	0	multi-exon	FALSE	canonical	1	1	junction_2	24.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACCTAGAGTATTAGAAGC	6363	False	NA	NA	False	TTTAAA	-38	NA	157489160	157460094	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_157460356_157470313_157470530_157489054
H1_mix_00066065	chr3	-	1462	6	FSM	ENSG00000118849.10	ENST00000237696.10	1713	6	35	216	20	-216	multi-exon	FALSE	canonical	1	1	junction_1	0.979795897113271	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATGTGTTGAATGTTCT	351	False	NA	NA	False	AATAAA	-20	NA	158732422	158697107	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_158697828_158697907_158697971_158704790_158704928_158710737_158710934_158713796_158713860_158732139
H1_mix_00066066	chr3	-	540	4	FSM	ENSG00000068885.15	ENST00000483325.1	554	4	0	14	0	-14	multi-exon	FALSE	canonical	3	6	junction_1	44.3045019031801	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGTCCCTGTGATCACTA	NA	False	NA	NA	False	AATAAA	-10	NA	160307781	160299092	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_160299275_160300882_160301047_160303914_160303990_160307662
H1_mix_00066067	chr3	-	591	6	FSM	ENSG00000068885.15	ENST00000478460.5	591	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	51.1624862570223	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACATGTGGTGGAACAAC	-1	True	NA	NA	False	NA	NA	NA	160399221	160319832	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_160319940_160356012_160356151_160357488_160357579_160375811_160375881_160377429_160377541_160399145
H1_mix_00066068	chr3	-	4038	3	FSM	ENSG00000213186.8	ENST00000494486.1	577	3	-115	-3346	-3	0	multi-exon	FALSE	canonical	3	12	junction_2	56	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCACTGTCTTAATGAGA	-4	True	NA	-1	True	AATAAA	-18	NA	160449728	160435502	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_160439187_160448725_160448796_160449444
H1_mix_00066070	chr3	-	3740	18	FSM	ENSG00000186432.10	ENST00000678630.1	3740	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	132.327605418179	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTACATGGGGTGTGTGT	8	True	NA	-34	True	AATAAA	-20	NA	160565389	160500172	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_160502203_160504957_160505053_160508106_160508270_160509799_160509872_160514076_160514182_160515451_160515581_160521778_160521911_160525799_160525845_160525937_160526108_160527952_160528040_160530854_160530941_160531461_160531558_160535512_160535566_160535660_160535691_160535807_160535898_160536795_160536841_160564504_160564641_160565213
H1_mix_00066071	chr3	-	3456	7	FSM	ENSG00000169255.15	ENST00000651953.1	3433	7	0	-23	0	-7	multi-exon	FALSE	canonical	3	9	junction_1	27.2361075698338	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATAATTAGAGTGTTCTA	2	True	NA	-9	True	AATAAA	-25	NA	161105305	161083889	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_161086789_161089943_161090063_161101138_161101234_161103112_161103206_161103426_161103518_161104318_161104407_161105234
H1_mix_00066072	chr3	-	3214	4	FSM	ENSG00000169255.15	ENST00000392779.6	3221	4	0	7	0	-7	multi-exon	FALSE	canonical	3	8	junction_1	29.9592315581618	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATAATTAGAGTGTTCTA	38	False	NA	-9	True	AATAAA	-25	NA	161105370	161083889	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_161086789_161103426_161103518_161104318_161104407_161105234
H1_mix_00066073	chr3	-	2458	6	FSM	ENSG00000169255.15	ENST00000652596.1	2458	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	29.1094486378564	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATCATTCTTTACATGCA	163	False	NA	NA	False	GATAAA	-9	NA	161105245	161085158	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_161086789_161101138_161101234_161103112_161103206_161103426_161103518_161104318_161104407_161104784
H1_mix_00066074	chr3	-	572	5	FSM	ENSG00000169255.15	ENST00000473142.5	572	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	33.1096662622866	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACAAGACTTTCACTTCA	9	True	NA	NA	False	NA	NA	NA	161105298	161086578	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_161086789_161089943_161090063_161103426_161103518_161104318_161104407_161105234
H1_mix_00066075	chr3	-	550	2	Genic_Genomic	ENSG00000234851.4	novel	471	1	NA	NA	0	59741	multi-exon	FALSE	non_canonical	0	0	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAGAAAGAGAGACAGAG	13	False	NA	NA	False	NA	NA	NA	161429597	161369385	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr3_-_161369413_161429074
H1_mix_00066076	chr3	-	3729	3	Intergenic	novelGene_959	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	91	junction_1	87.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTTGTTCTTTCTTTT	NA	False	NA	-6	True	AATAAA	-15	NA	164341493	164026597	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_164029783_164074387_164074606_164341167
H1_mix_00066077	chr3	-	2706	2	Intergenic	novelGene_969	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	266	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATGTTATTCTTTTTATC	NA	False	NA	-7	True	TATAAA	-20	NA	164341493	164072225	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_164074606_164341167
H1_mix_00066078	chr3	-	2243	4	Intergenic	novelGene_970	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	153	junction_3	444.619937574654	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTAATCAGATGTCTGTT	13	False	NA	-11	True	AATAAA	-26	NA	164341476	164072868	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_164074606_164193507_164193677_164196618_164196701_164341221
H1_mix_00066079	chr3	-	2419	5	Intergenic	novelGene_974	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	65	junction_3	483.90830743024	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTAATCAGATGTCTGTT	1	True	NA	-11	True	AATAAA	-26	NA	164341488	164072868	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_-_164074606_164193507_164193677_164196618_164196701_164298707_164298818_164341167
H1_mix_00066080	chr3	-	3233	21	FSM	ENSG00000169064.13	ENST00000392766.6	3250	21	17	0	-1	0	multi-exon	FALSE	canonical	2	6	junction_19	5.02468904510518	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTGTGAAACTTTTCATA	17	True	NA	NA	False	AATAAA	-27	NA	167380284	167240286	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_167240920_167242504_167242644_167282237_167282496_167298304_167298459_167305642_167305951_167313973_167314117_167315749_167315830_167317004_167317106_167317487_167317598_167322116_167322238_167327941_167328117_167333826_167333986_167350419_167350516_167359869_167359980_167360674_167360724_167365885_167365977_167368460_167368575_167372833_167372951_167373705_167373788_167379637_167379793_167380246
H1_mix_00066081	chr3	-	2515	10	NIC	ENSG00000171757.17	novel	2383	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	6	junction_1	9.51931110693507	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGTAGGGTAATTTTTTA	1	True	NA	NA	False	ATTAAA	-28	NA	169812904	169793472	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_169793839_169795484_169796370_169796744_169796900_169800658_169800755_169804052_169804182_169806847_169806932_169807425_169807491_169807587_169807710_169808627_169808746_169812409
H1_mix_00066082	chr3	-	1730	2	FSM	ENSG00000239219.2	ENST00000469301.1	1738	2	0	8	0	-8	multi-exon	FALSE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACAGAGGAGTGTTTTCC	NA	False	NA	NA	False	AATAAA	-10	NA	169966734	169954234	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_169955208_169965977
H1_mix_00066083	chr3	-	5030	15	FSM	ENSG00000173889.16	ENST00000494943.5	5030	15	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_14	8.21676981072544	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACTCTATAATGAGTTTT	2	True	NA	-8	True	ATTAAA	-17	NA	170181733	170095220	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_170097385_170102478_170102711_170102801_170102935_170106831_170106947_170113359_170113520_170117225_170117477_170122590_170122745_170128683_170129553_170136418_170136666_170145422_170145522_170149085_170149245_170171372_170171451_170172556_170172713_170178772_170178939_170181686
H1_mix_00066087	chr3	-	532	4	FSM	ENSG00000075651.17	ENST00000418087.1	621	4	89	0	89	0	multi-exon	FALSE	canonical	2	3	junction_3	3.74165738677394	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTAGAAGGTAACCATTTT	6501	False	NA	NA	False	NA	NA	NA	171771270	171735500	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_171735638_171737531_171737660_171737891_171738083_171771194
H1_mix_00066088	chr3	-	11486	2	NNC	ENSG00000288895.1	novel	854	3	NA	NA	-1056	10310	at_least_one_novel_splicesite	TRUE	canonical	3	59	junction_1	0	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTACCTTTATTATTTCT	NA	False	NA	NA	False	NA	NA	NA	176328124	176311344	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_176322019_176327312
H1_mix_00066089	chr3	-	628	4	NNC	ENSG00000223715.3	novel	3331	6	NA	NA	145372	-2754	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	6.59966329107444	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAATTTTAATGGGCATTT	NA	False	NA	-9	True	AATAAA	-16	NA	176491407	176418192	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_176418526_176420931_176420997_176424312_176424474_176491338
H1_mix_00066091	chr3	-	336	1	FSM	ENSG00000271131.1	ENST00000603675.1	484	1	121	27	121	-27	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCACCATTGCTGACTG	NA	False	NA	NA	False	NA	NA	NA	178493689	178493353	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_178493400_178493700
H1_mix_00066092	chr3	-	594	4	NIC	ENSG00000237978.6	novel	844	8	NA	NA	0	26	combination_of_known_junctions	FALSE	canonical	2	15	junction_1	23.5702260395516	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAATCTTTGTTTTGTTAT	NA	False	NA	-3	True	NA	NA	NA	178860405	178748961	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_178749237_178841544_178841617_178859488_178859624_178860293
H1_mix_00066093	chr3	-	6112	6	ISM	ENSG00000172667.11	ENST00000652290.1	2826	10	27	59918	5	-2816	5prime_fragment	FALSE	canonical	3	16	junction_5	9.68710483064987	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGTCATTATTGATCAG	1	True	NA	NA	False	AATAAA	-24	NA	179071804	179020038	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr3_-_179025226_179027422_179027524_179027645_179027813_179030879_179031000_179067482_179067810_179071594
H1_mix_00066094	chr3	-	4125	5	FSM	ENSG00000171121.17	ENST00000392686.6	2055	5	-1514	-556	-1514	477	multi-exon	FALSE	canonical	0	0	junction_1	6.02079728939615	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGACAGATTAAATAAGGT	5596	False	NA	NA	False	NA	NA	NA	179261405	179239264	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_179240065_179242808_179243285_179244494_179244694_179250742_179250935_179258947
H1_mix_00066095	chr3	-	1099	3	FSM	ENSG00000171121.17	ENST00000392685.7	1085	3	-7	-7	-7	7	multi-exon	FALSE	canonical	3	8	junction_2	4.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCATTTTGTATTCTATT	382	False	NA	NA	False	ATTAAA	-34	NA	179251121	179242763	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_179243285_179244494_179244694_179250742
H1_mix_00066096	chr3	-	470	1	FSM	ENSG00000272910.1	ENST00000608818.1	501	1	-63	94	-63	-94	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCCTAGGATAAAAATACAA	6869	False	NA	NA	False	NA	NA	NA	179583825	179583355	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_179583400_179583800
H1_mix_00066107	chr3	-	1519	11	FSM	ENSG00000175193.14	ENST00000638817.1	1534	11	10	5	-9	0	multi-exon	FALSE	canonical	3	45	junction_6	407.258505129113	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGATGTGTGTGTTCTCTC	-21	True	NA	-4	True	AATAAA	-21	NA	183884897	183829389	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_183829710_183833491_183833590_183833723_183833826_183840569_183840641_183842297_183842448_183844230_183844327_183856431_183856552_183862752_183862802_183866624_183866766_183867864_183868061_183884721
H1_mix_00066108	chr3	-	1098	8	FSM	ENSG00000175193.14	ENST00000435888.5	1098	8	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_2	434.384293322991	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAAGCAGATGTGTGTG	21	True	NA	-11	True	AATAAA	-14	NA	183884855	183829396	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr3_-_183829710_183833491_183833590_183840569_183840641_183844230_183844327_183862752_183862802_183866624_183866766_183867864_183868061_183884721
H1_mix_00066124	chr3	-	1338	11	NNC	ENSG00000163918.12	novel	1365	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	84	junction_2	225.520642070743	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACCTTTAAAGTGAATATA	11	True	NA	-44	True	AATAAA	-17	NA	186806468	186789902	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_186790065_186790141_186790246_186790325_186790407_186791724_186791851_186792489_186792611_186792803_186792948_186794657_186794778_186797534_186797615_186801116_186801196_186804582_186804725_186806289
H1_mix_00066125	chr3	-	1414	10	NIC	ENSG00000163918.12	novel	1365	11	NA	NA	0	-11	intron_retention	FALSE	canonical	3	447	junction_9	113.783202995656	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGACCAAAAGCACCTTTA	11	True	NA	-55	True	AATAAA	-6	NA	186806468	186789913	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_186790256_186790325_186790407_186791724_186791851_186792489_186792611_186792803_186792948_186794657_186794778_186797534_186797615_186801116_186801196_186804582_186804725_186806289
H1_mix_00066126	chr3	-	436	3	NNC	ENSG00000163923.10	novel	749	4	NA	NA	67	-20025	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	169	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTGTTTCAATCAATAAA	NA	False	NA	0	True	AATAAA	-24	NA	187180841	187140972	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_187141172_187173615_187173676_187180664
H1_mix_00066127	chr3	-	7002	3	NNC	ENSG00000163923.10	novel	749	4	NA	NA	-1093	-49915	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	19	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAAATCTAAATCT	NA	False	NA	NA	False	AATGAA	-9	NA	187182001	187170862	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_187175145_187178712_187181400_187181968
H1_mix_00066128	chr3	-	2573	3	NNC	ENSG00000163923.10	novel	749	4	NA	NA	54	-50629	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAATATTTTCTTGTACC	NA	False	NA	-7	True	AATAAA	-15	NA	187180854	187171576	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_187173676_187178712_187178997_187180664
H1_mix_00066129	chr3	-	427	3	NNC	ENSG00000163923.10	novel	749	4	NA	NA	6	-50629	at_least_one_novel_splicesite	FALSE	canonical	3	125	junction_1	111.5	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAATATTTTCTTGTACC	NA	False	NA	-7	True	AATAAA	-15	NA	187180902	187171576	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr3_-_187171706_187173615_187173676_187180664
H1_mix_00066156	chr3	-	4796	26	NIC	ENSG00000075711.21	novel	5034	26	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	99	junction_25	63.8507509744404	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGAGGAGAACAGCTAAT	2	True	NA	-40	True	NA	NA	NA	197297871	197042966	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_197044730_197051576_197051669_197059888_197059999_197065275_197065449_197065707_197065810_197066703_197066755_197069218_197069261_197076585_197076686_197081050_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197149742_197149797_197161639_197161739_197194424_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197297543
H1_mix_00066162	chr3	-	1677	8	NIC	ENSG00000214135.9	novel	1555	8	NA	NA	3	7	combination_of_known_junctions	FALSE	canonical	3	10	junction_7	34.5489891756796	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAATTGACTGAGACCAG	41	False	NA	NA	False	AATAAA	-4	NA	197627839	197614042	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr3_-_197614623_197615563_197615686_197619739_197619889_197621703_197621869_197622186_197622331_197623219_197623383_197624111_197624198_197627571
H1_mix_00066167	chr3	+	1586	1	Intergenic	novelGene_875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	19	True	AATAAA	-22	NA	8181094	8182680	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_8181100_8182700
H1_mix_00066168	chr3	+	375	1	Intergenic	novelGene_878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCCCCCCAAAACAATGAAG	NA	False	NA	NA	False	NA	NA	NA	15374529	15374904	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_15374500_15374900
H1_mix_00066170	chr3	+	1703	1	Intergenic	novelGene_883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTGTTTCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33083563	33085266	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_33083600_33085300
H1_mix_00066171	chr3	+	232	1	Intergenic	novelGene_886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAAGGTGATTTGGCATA	NA	False	NA	NA	False	TATAAA	-44	NA	34641032	34641264	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_34641000_34641300
H1_mix_00066172	chr3	+	333	1	Intergenic	novelGene_887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	254	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGAAGCTTTGCGGCAG	NA	False	NA	NA	False	AAGAAA	-30	NA	34641906	34642239	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_34641900_34642200
H1_mix_00066173	chr3	+	292	1	Intergenic	novelGene_889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATAGAATTTTCTAGGAA	9722	False	NA	NA	False	NA	NA	NA	36968559	36968851	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_36968600_36968900
H1_mix_00066174	chr3	+	325	1	Intergenic	novelGene_891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTTACAAGTGACTGGCA	NA	False	NA	NA	False	NA	NA	NA	38719367	38719692	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_38719400_38719700
H1_mix_00066175	chr3	+	209	1	Intergenic	novelGene_896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGAAGGAGAAAAACAGGT	4346	False	NA	NA	False	ACTAAA	-8	NA	46246806	46247015	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_46246800_46247000
H1_mix_00066176	chr3	+	409	1	Intergenic	novelGene_899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGCGCTGCGTCTAACC	NA	False	NA	NA	False	NA	NA	NA	49585218	49585627	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_49585200_49585600
H1_mix_00066177	chr3	+	295	1	Intergenic	novelGene_900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTGTGTTCTTAAAAGCA	2243	False	NA	NA	False	NA	NA	NA	51996170	51996465	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_51996200_51996500
H1_mix_00066178	chr3	+	488	1	Intergenic	novelGene_907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGAGATGGGAGGATAGC	NA	False	NA	NA	False	NA	NA	NA	75424557	75425045	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_75424600_75425000
H1_mix_00066179	chr3	+	223	1	Intergenic	novelGene_910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACACGGACGTGCATGAA	NA	False	NA	NA	False	AATAAA	-39	NA	78323862	78324085	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_78323900_78324100
H1_mix_00066180	chr3	+	1768	1	Intergenic	novelGene_922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGGAGAACTCCCAAGGT	NA	False	NA	NA	False	NA	NA	NA	112183361	112185129	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_112183400_112185100
H1_mix_00066181	chr3	+	431	1	Intergenic	novelGene_926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGACATGAGGCCTAGGCT	4064	False	NA	NA	False	ATTAAA	-20	NA	115795158	115795589	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_115795200_115795600
H1_mix_00066182	chr3	+	260	1	Intergenic	novelGene_928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGATGGGTCGCCAAGG	4940	False	NA	NA	False	NA	NA	NA	115796034	115796294	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_115796000_115796300
H1_mix_00066183	chr3	+	288	1	Intergenic	novelGene_933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	123253431	123253719	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_123253400_123253700
H1_mix_00066184	chr3	+	228	1	Intergenic	novelGene_936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	273	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATTGAAGATAGGAGAGC	NA	False	NA	NA	False	AAGAAA	-43	NA	124754846	124755074	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_124754800_124755100
H1_mix_00066185	chr3	+	273	1	Intergenic	novelGene_938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCCCGCCTTCCTAACC	NA	False	NA	NA	False	NA	NA	NA	125595869	125596142	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_125595900_125596100
H1_mix_00066186	chr3	+	357	1	Intergenic	novelGene_941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGACGCCGAGCTTCCGGT	NA	False	NA	NA	False	NA	NA	NA	128961854	128962211	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_128961900_128962200
H1_mix_00066187	chr3	+	1572	1	Intergenic	novelGene_943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATAGCAGCATGATTTAG	NA	False	NA	9	True	AATAAA	-19	NA	132370135	132371707	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_132370100_132371700
H1_mix_00066188	chr3	+	280	1	Intergenic	novelGene_944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	141483854	141484134	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_141483900_141484100
H1_mix_00066189	chr3	+	948	1	Intergenic	novelGene_946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCATACCTGATGCATAT	NA	False	NA	NA	False	NA	NA	NA	148417149	148418097	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_148417100_148418100
H1_mix_00066190	chr3	+	2684	1	Intergenic	novelGene_976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATAAAACCTGTTTAAAGG	NA	False	NA	NA	False	AATATA	-6	NA	164093369	164096053	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_164093400_164096100
H1_mix_00066191	chr3	+	3549	1	Intergenic	novelGene_981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGCCAGGCGTAGTAGTG	NA	False	NA	NA	False	AAAAAG	-15	NA	170140641	170144190	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_170140600_170144200
H1_mix_00066192	chr3	+	316	1	Intergenic	novelGene_986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTCTTTCAGCTGTACTC	NA	False	NA	NA	False	NA	NA	NA	171579882	171580198	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr3_+_171579900_171580200
H1_mix_00066195	chr4	+	1997	2	FSM	ENSG00000272602.6	ENST00000608255.2	1999	2	2	0	2	0	multi-exon	FALSE	canonical	2	20	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGTATTATTTTTCTT	NA	False	NA	11	True	AATAAA	-23	NA	53287	87523	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_53492_85730
H1_mix_00066196	chr4	+	6168	4	FSM	ENSG00000289361.1_ENSG00000272602.6	ENST00000610261.6	2872	4	-21	-3275	-4	-5	multi-exon	FALSE	canonical	3	74	junction_3	8.05536398239638	246	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAACACAATTGTCTGCTT	NA	False	NA	4	True	AATAAA	-16	NA	53299	91483	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_53492_59429_59557_60057_60154_85730
H1_mix_00066197	chr4	+	4953	4	NNC	ENSG00000272602.6	novel	2872	4	NA	NA	5	1722	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	34.4222150491349	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTCTTTTTTTTTT	-6	True	NA	NA	False	NA	NA	NA	53333	89930	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_53864_59429_59557_60057_60154_85730
H1_mix_00066198	chr4	+	3125	2	NNC	ENSG00000250312.8	novel	2772	4	NA	NA	0	-33525	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATTGGTCTAGAAAAACAT	-10	True	NA	11	True	AATAAA	-17	NA	124500	129176	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_125297_126847
H1_mix_00066199	chr4	+	3647	4	FSM	ENSG00000250312.8	ENST00000510175.6	3647	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	4.02768199119819	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTTGGACATCTGGC	-10	True	NA	NA	False	AATAAA	-22	NA	124500	164162	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_124674_130787_130915_131409_131506_160911
H1_mix_00066200	chr4	+	2110	1	FSM	ENSG00000275426.1	ENST00000618815.1	580	1	-1521	-9	-1521	9	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCCTGCTTTGAATATT	NA	False	NA	13	True	AATAAA	-28	NA	148216	150326	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_148200_150300
H1_mix_00066201	chr4	+	2614	2	FSM	ENSG00000198155.5	ENST00000356347.3	2598	2	-16	0	-16	0	multi-exon	FALSE	canonical	3	68	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAGATGCAAGTTCACA	1	True	NA	NA	False	TATAAA	-15	NA	212593	255985	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_212782_253559
H1_mix_00066202	chr4	+	3294	4	NNC	ENSG00000131127.14	novel	720	4	NA	NA	-79	2171	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	31.6262900483478	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATAAATATATATGTGAC	NA	False	NA	NA	False	AATAAA	-27	NA	337734	360721	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_337987_343781_343909_344334_344431_357902
H1_mix_00066203	chr4	+	12603	4	FSM	ENSG00000131127.14	ENST00000240499.8	12601	4	-2	0	-2	0	multi-exon	FALSE	canonical	3	62	junction_3	13.1233464566864	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTGATGTCTGTGTGCC	4	True	NA	NA	False	AATAAA	-20	NA	337811	384868	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_337987_343781_343909_344334_344431_372663
H1_mix_00066204	chr4	+	1799	9	FSM	ENSG00000174227.16	ENST00000504187.5	1784	9	-15	0	-15	0	multi-exon	FALSE	canonical	3	9	junction_3	46.218063297806	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGTGACGTAGTCCTTC	NA	False	NA	NA	False	NA	NA	NA	499194	521961	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_499490_500395_500602_501100_501171_505717_505928_507404_507594_508828_508971_515972_516186_521055_521228_521659
H1_mix_00066205	chr4	+	3905	13	FSM	ENSG00000174227.16	ENST00000453061.7	3909	13	2	2	2	2	multi-exon	FALSE	canonical	3	40	junction_11	32.4819394262241	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAATGTTTTACATTTTTA	-31	True	NA	7	True	AATAAA	-18	NA	499211	540198	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_499490_500395_500602_505717_505928_507404_507594_508828_508971_515972_516186_521055_521274_521659_521942_523458_523914_527038_527231_530435_530746_533817_533982_539152
H1_mix_00066206	chr4	+	1189	3	FSM	ENSG00000174227.16	ENST00000502311.1	1189	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	40	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGCTAGAACAGAAAGCCC	-3	True	NA	NA	False	NA	NA	NA	499239	502329	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_499490_500395_500602_501596
H1_mix_00066208	chr4	+	2192	9	NIC	ENSG00000174227.16	novel	3909	13	NA	NA	-4	-6	combination_of_known_splicesites	FALSE	canonical	3	14	junction_8	35.9494002036195	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGACAGATGAGCGTGAAT	11	True	NA	NA	False	AATAAA	-22	NA	499253	527534	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_499490_500395_500602_505717_505928_507404_507594_508828_508971_515972_516186_521055_521274_521659_521942_527038
H1_mix_00066212	chr4	+	7213	2	ISM	ENSG00000174227.16	ENST00000510235.1	752	3	0	-3256	0	0	intron_retention	FALSE	canonical	3	25	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGCGCCTCTCTGCCGT	NA	False	NA	NA	False	NA	NA	NA	525567	533981	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_525838_527038
H1_mix_00066213	chr4	+	3519	2	FSM	ENSG00000174227.16	ENST00000513239.5	3519	2	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGTATCATATTTTCC	NA	False	NA	7	True	AATAAA	-17	NA	530839	539529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_533982_539152
H1_mix_00066215	chr4	+	546	2	FSM	ENSG00000133256.13	ENST00000460119.1	541	2	-5	0	-5	0	multi-exon	FALSE	canonical	3	35	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTGGGAAGTCCAGAGCA	4	True	NA	NA	False	NA	NA	NA	663717	664922	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_664222_664880
H1_mix_00066216	chr4	+	1326	7	ISM	ENSG00000133256.13	ENST00000429163.6	2120	20	10590	-555	0	6	3prime_fragment	FALSE	canonical	0	0	junction_5	13.3343749593131	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTATCTGTGGTAAAATGA	56	False	NA	16	True	AATAAA	-22	NA	663769	670788	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_663871_664113_664222_664880_664945_665254_665330_666530_666615_667855_668007_670045
H1_mix_00066217	chr4	+	1106	7	NIC	ENSG00000133256.13	novel	2120	20	NA	NA	11	-138	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	15.9234278833282	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGAAATCACTGAGAACAT	67	False	NA	77	True	NA	NA	NA	663780	670644	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_663871_664113_664222_664880_664945_665254_665330_666530_666615_667855_667942_670045
H1_mix_00066218	chr4	+	830	8	NIC	ENSG00000215375.6	novel	1780	8	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	11.9129495653654	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCCTGCGAGTCTGCCG	0	True	NA	23	True	AATAAA	-15	NA	674543	682028	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_674684_676072_676210_678657_678766_678957_679034_679913_680019_680508_680588_681091_681141_681892
H1_mix_00066221	chr4	+	531	2	FSM	ENSG00000215375.6	ENST00000503612.1	531	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCCTGCGAGTCTGCCG	2410	False	NA	23	True	AATAAA	-15	NA	680745	682028	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_681141_681892
H1_mix_00066222	chr4	+	6116	11	FSM	ENSG00000185619.18	ENST00000362003.9	5685	11	5	-436	5	436	multi-exon	FALSE	canonical	3	47	junction_3	22.5390771772049	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGGACTTGG	-17	True	NA	NA	False	TTTAAA	-14	NA	705769	771076	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_705971_730629_730669_730969_731111_733671_733790_734930_735028_737465_737522_743473_743585_744599_744689_761278_761417_764983_765065_766031
H1_mix_00066223	chr4	+	1189	4	FSM	ENSG00000185619.18	ENST00000400151.6	1175	4	-14	0	5	0	multi-exon	TRUE	canonical	3	47	junction_3	26.1661358757205	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGACTTTAACGTTAATC	-17	True	NA	9	True	AATAAA	-22	NA	705769	734479	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_705971_730629_730669_730969_731111_733671
H1_mix_00066224	chr4	+	3571	11	NIC	ENSG00000185619.18	novel	3609	13	NA	NA	0	-366	intron_retention	FALSE	canonical	3	13	junction_4	34.006469972639	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCCTTGGCCACCATTCAG	-3	True	NA	NA	False	NA	NA	NA	705783	767498	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_705971_730629_730669_730969_731111_733671_733790_733883_735028_737465_737522_743473_743585_744599_744689_761278_761417_764983_765065_766031
H1_mix_00066225	chr4	+	2532	12	NIC	ENSG00000185619.18	novel	3609	13	NA	NA	0	-366	intron_retention	FALSE	canonical	3	31	junction_3	28.4906828325413	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCCTTGGCCACCATTCAG	39	False	NA	NA	False	NA	NA	NA	705874	767498	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_705971_730629_730669_730969_731111_732399_732499_733671_733790_734930_735028_737465_737522_743473_743585_744599_744689_761278_761417_764983_765065_766031
H1_mix_00066226	chr4	+	3804	10	FSM	ENSG00000127419.17	ENST00000515876.5	1007	10	-55	-2742	2	30	multi-exon	TRUE	canonical	3	34	junction_3	9.78661217060213	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCACAGGAACTGGAAATGT	18	False	NA	42	True	NA	NA	NA	932405	958686	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_932541_947708_947893_948115_948155_950420_950519_951206_951259_951681_951718_952366_952451_953189_953355_955404_955484_955754
H1_mix_00066228	chr4	+	2189	14	FSM	ENSG00000127415.13	ENST00000514224.2	2174	14	-15	0	-15	0	multi-exon	FALSE	canonical	2	12	junction_10	8.45314268788686	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCGGGTTGAGGCTCTGT	7	True	NA	9	True	TTTAAA	-19	NA	987028	1004564	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_987243_987808_987950_1000611_1000698_1000881_1000990_1001467_1001564_1001678_1001882_1001981_1002162_1002268_1002486_1002731_1002945_1003035_1003158_1003344_1003471_1003548_1003626_1004011_1004113_1004259
H1_mix_00066229	chr4	+	1004	4	FSM	ENSG00000127415.13	ENST00000506561.5	692	4	142	-454	131	-82	multi-exon	FALSE	canonical	3	21	junction_3	2.16024689946929	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCATCCCCAGGGCAGGTG	164	False	NA	NA	False	NA	NA	NA	987217	1001633	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_987243_987808_987950_1000611_1000698_1000881
H1_mix_00066230	chr4	+	3710	6	ISM	ENSG00000127418.15	ENST00000510644.6	3411	7	-60	1	-60	0	intron_retention	FALSE	canonical	3	70	junction_1	13.4402380931292	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGGTGTTTCTGCCCAT	545	False	NA	25	True	NA	NA	NA	1011565	1026897	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_1011955_1012469_1012565_1022202_1022476_1023640_1023722_1023816_1024102_1024310
H1_mix_00066231	chr4	+	3427	7	FSM	ENSG00000127418.15	ENST00000510644.6	3411	7	-17	1	-17	0	multi-exon	FALSE	canonical	3	70	junction_1	13.1370975992924	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGGTGTTTCTGCCCAT	-21	True	NA	25	True	NA	NA	NA	1011608	1026897	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1011955_1012469_1012565_1022202_1022476_1023640_1023722_1023816_1024102_1024310_1024665_1024904
H1_mix_00066232	chr4	+	3414	7	NNC	ENSG00000127418.15	novel	3411	7	NA	NA	31	1	at_least_one_novel_splicesite	TRUE	canonical	2	14	junction_1	32.354374596885	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGTTTCTGCCCATGT	27	False	NA	27	True	NA	NA	NA	1011656	1026899	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_1011988_1012469_1012565_1022202_1022476_1023640_1023722_1023816_1024102_1024310_1024665_1024904
H1_mix_00066233	chr4	+	303	1	FSM	ENSG00000273179.1	ENST00000609548.1	397	1	8	86	8	-86	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACAGGACTCAGACCTTT	NA	False	NA	NA	False	NA	NA	NA	1167785	1168088	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1167800_1168100
H1_mix_00066234	chr4	+	2866	3	FSM	ENSG00000196810.5	ENST00000578730.1	2757	3	-151	42	0	-42	multi-exon	FALSE	canonical	3	6	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATGATCCTTAACCTTGG	32	False	NA	NA	False	NA	NA	NA	1249299	1288249	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1251823_1287604_1287724_1288025
H1_mix_00066235	chr4	+	2059	8	FSM	ENSG00000090316.16	ENST00000264750.10	2058	8	-1	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	247.856772334017	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCGTGTGAGCCGAGGC	-5	True	NA	36	True	AATAAA	-44	NA	1289889	1340136	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1289983_1311978_1312162_1315396_1315601_1327626_1327704_1332756_1332866_1336860_1336995_1338421_1338618_1339073
H1_mix_00066236	chr4	+	2238	9	FSM	ENSG00000090316.16	ENST00000303400.9	2182	9	-52	-4	-48	4	multi-exon	FALSE	canonical	3	633	junction_4	43.9912988555692	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGAGCCGAGGCTGCCG	NA	False	NA	41	True	AATAAA	-23	NA	1289838	1340141	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1289983_1311978_1312162_1315396_1315601_1322380_1322504_1327626_1327704_1332756_1332866_1336860_1336995_1338421_1338618_1339073
H1_mix_00066237	chr4	+	2426	5	FSM	ENSG00000090316.16	ENST00000512289.5	2426	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	300.202015316353	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAATGGTTTTCTATTT	NA	False	NA	13	True	AATAAA	-21	NA	1329056	1340113	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1330004_1332756_1332866_1336860_1336995_1338421_1338618_1339073
H1_mix_00066238	chr4	+	3854	15	FSM	ENSG00000163945.19	ENST00000679192.1	3869	15	15	0	15	0	multi-exon	FALSE	canonical	0	0	junction_14	17.6451704671938	977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAAGGCTGTTTTGACT	13	True	NA	NA	False	NA	NA	NA	1347073	1387868	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1347230_1348089_1348190_1349523_1349855_1351714_1351836_1353029_1353414_1354734_1354848_1355116_1355246_1366319_1366432_1375363_1375509_1376033_1376169_1380046_1380231_1380879_1380989_1383765_1383941_1385867_1386399_1386739
H1_mix_00066239	chr4	+	4553	14	NNC	ENSG00000163945.19	novel	12504	14	NA	NA	0	0	intron_retention	FALSE	canonical	2	7	junction_13	15.5681361731366	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAAGGCTGTTTTGACT	39	False	NA	NA	False	NA	NA	NA	1347265	1387868	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_1347888_1348089_1348190_1349523_1349855_1351714_1351836_1353029_1353414_1354734_1354848_1355116_1355246_1366319_1366432_1375363_1375509_1376033_1376169_1380046_1380231_1380879_1380989_1383765_1383833_1385867
H1_mix_00066240	chr4	+	12504	14	FSM	ENSG00000163945.19	ENST00000511216.6	12504	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.8383102320266	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTGTTTGTGACCAAGT	39	False	NA	26	True	ATTAAA	-15	NA	1347265	1395989	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1347610_1348089_1348190_1349523_1349855_1351714_1351836_1353029_1353414_1354734_1354848_1355116_1355246_1366319_1366432_1375363_1375509_1376033_1376169_1380046_1380231_1380879_1380989_1383765_1383941_1385867
H1_mix_00066241	chr4	+	2597	14	FSM	ENSG00000163945.19	ENST00000507531.5	2597	14	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	13.8239137626063	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGTGCTTGTCGTGGTGT	479	False	NA	NA	False	NA	NA	NA	1347705	1386244	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1347888_1348089_1348190_1349523_1349855_1351714_1351836_1353029_1353414_1354734_1354848_1355116_1355246_1366319_1366432_1375363_1375509_1376033_1376169_1380046_1380231_1380879_1380989_1383765_1383941_1385867
H1_mix_00066242	chr4	+	549	2	FSM	ENSG00000163945.19	ENST00000505716.1	549	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGAGCCTGAGGGAGGGG	7280	False	NA	NA	False	AATACA	-11	NA	1354506	1355214	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1354848_1355006
H1_mix_00066243	chr4	+	1805	15	FSM	ENSG00000013810.21	ENST00000612220.5	1732	15	-46	-27	-46	19	multi-exon	FALSE	canonical	3	11	junction_3	207.115379950995	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATGAAGCAAAGGTTTCC	826	False	NA	49	True	AATAAA	-39	NA	1721453	1745190	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1721644_1723420_1723584_1723727_1723871_1730886_1730963_1731171_1731302_1735272_1735326_1735730_1735835_1737240_1737329_1737597_1737703_1739701_1739779_1739958_1740003_1740825_1740987_1744517_1744625_1744711_1744833_1744947
H1_mix_00066254	chr4	+	7560	22	FSM	ENSG00000109685.19	ENST00000508803.6	7560	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	77.3101360938987	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTCTTAACTTATTTTA	-7	True	NA	13	True	ATTAAA	-15	NA	1871392	1982192	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1871543_1900625_1901252_1904215_1904379_1916870_1917038_1918140_1918624_1930625_1930771_1935143_1935263_1938450_1938533_1939653_1939779_1951071_1951204_1952107_1952232_1953323_1953525_1955160_1955341_1955692_1955850_1955982_1956189_1957932_1958037_1959470_1959741_1961034_1961152_1974862_1975005_1975293_1975401_1976474_1976680_1978637
H1_mix_00066255	chr4	+	2822	5	FSM	ENSG00000109685.19	ENST00000508355.5	2092	5	-390	-340	-329	340	multi-exon	FALSE	canonical	3	247	junction_4	30.3263499287336	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATCATATTCTCATGCTTA	498	False	NA	61	True	NA	NA	NA	1871063	1919527	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1871543_1900625_1901252_1904215_1904379_1916870_1917038_1918140
H1_mix_00066256	chr4	+	3971	9	FSM	ENSG00000109685.19	ENST00000514045.5	3964	9	-7	0	0	0	multi-exon	FALSE	canonical	3	187	junction_7	46.4515877016061	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCATTAGTGTTCATTT	10	True	NA	-79	True	ATTAAA	-25	NA	1871453	1941750	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1871543_1900625_1901252_1904215_1904379_1916870_1917038_1918140_1918624_1930625_1930771_1935143_1935263_1938450_1938533_1939653
H1_mix_00066260	chr4	+	2666	12	FSM	ENSG00000109685.19	ENST00000382888.3	2666	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	96.1640299756464	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGCCGCTTGGCCGGATCC	NA	False	NA	NA	False	GGGGCT	-33	NA	1952104	1978915	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1952232_1952751_1953525_1955160_1955341_1955692_1955850_1955982_1956189_1957932_1958037_1959470_1959741_1961034_1961152_1974862_1975005_1975293_1975401_1976474_1976680_1978637
H1_mix_00066262	chr4	+	4918	6	FSM	ENSG00000109685.19	ENST00000679039.1	4552	6	-327	-39	-327	5	multi-exon	FALSE	canonical	3	295	junction_1	20.7402989370935	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGGATTGTTTGATTTTT	NA	False	NA	33	True	ATTAAA	-35	NA	1958968	1982212	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1959741_1961034_1961152_1974862_1975005_1975293_1975401_1976474_1976680_1978637
H1_mix_00066263	chr4	+	4220	4	FSM	ENSG00000109685.19	ENST00000677895.1	4220	4	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_1	9.41629792788369	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAACATTTTAAAGGCT	NA	False	NA	-6	True	TTTAAA	-44	NA	1974632	1982173	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1975005_1975293_1975401_1976474_1976680_1978637
H1_mix_00066266	chr4	+	6067	3	FSM	ENSG00000185818.8	ENST00000423729.3	6056	3	-11	0	-11	0	multi-exon	FALSE	canonical	3	19	junction_2	2.5	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCTCCCGTGCTCTCTT	14	True	NA	26	True	AATAAA	-17	NA	2059315	2069089	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_2059888_2060997_2061163_2063759
H1_mix_00066267	chr4	+	911	5	FSM	ENSG00000063978.16	ENST00000509258.5	893	5	-18	0	-9	0	multi-exon	FALSE	canonical	0	0	junction_4	305.256040071282	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGGCAGGGAAGGAAGAGG	NA	False	NA	NA	False	NA	NA	NA	2469087	2512334	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_2469259_2490336_2490503_2497006_2497122_2500658_2500739_2511955
H1_mix_00066270	chr4	+	2978	8	FSM	ENSG00000063978.16	ENST00000314289.13	2921	8	-60	3	-22	0	multi-exon	FALSE	canonical	0	0	junction_4	312.750666812777	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATCTTTTACACATTCA	NA	False	NA	14	True	AATAAA	-17	NA	2469045	2515854	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_2469259_2490336_2490503_2497006_2497122_2500658_2500739_2511955_2511966_2512437_2512598_2513082_2513132_2513669
H1_mix_00066271	chr4	+	2818	7	FSM	ENSG00000063978.16	ENST00000541204.5	2796	7	-22	0	-22	0	multi-exon	FALSE	canonical	0	0	junction_4	351.581861812517	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATCTTTTACACATTCA	NA	False	NA	14	True	AATAAA	-17	NA	2469045	2515854	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_2469259_2490336_2490503_2497006_2497122_2500658_2500739_2511955_2511966_2513082_2513132_2513669
H1_mix_00066273	chr4	+	5530	21	FSM	ENSG00000125386.16	ENST00000637812.2	5522	21	-8	0	-8	0	multi-exon	FALSE	canonical	2	39	junction_1	22.8245481882994	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTCGGCTGCTTCTTTCT	-23	True	NA	21	True	AATACA	-15	NA	2536638	2732573	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_2537171_2596083_2596330_2625261_2625396_2626409_2626578_2630934_2631170_2639734_2639860_2646684_2646833_2657802_2657881_2659557_2659671_2659811_2660055_2662837_2662992_2663108_2663289_2672120_2672373_2689505_2689705_2690697_2690971_2693585_2693875_2694945_2695130_2696362_2696594_2699679_2700545_2716022_2716105_2731774
H1_mix_00066276	chr4	+	615	4	FSM	ENSG00000087266.17	ENST00000512131.5	615	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	50.4997249717483	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGCCAGCGCCCACAC	5	True	NA	NA	False	NA	NA	NA	2793071	2824917	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_2793139_2820613_2820754_2822934_2823038_2824612
H1_mix_00066279	chr4	+	9153	13	FSM	ENSG00000087266.17	ENST00000511747.6	2351	13	5	-6807	5	0	multi-exon	TRUE	canonical	1	35	junction_9	27.7288457907806	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTGTCTCACTTGTGTT	1	True	NA	7	True	ATTAAA	-23	NA	2818189	2841096	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_2818391_2820613_2820754_2822934_2823038_2824612_2824731_2825125_2825197_2827229_2827319_2827605_2827675_2829492_2830148_2831570_2831680_2831922_2831979_2832330_2832413_2832989_2833050_2833696
H1_mix_00066285	chr4	+	4060	15	FSM	ENSG00000087274.19	ENST00000264758.11	4045	15	-15	0	-2	0	multi-exon	FALSE	canonical	3	89	junction_10	264.053565994261	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTGGGAAGCAGTTTTA	-32	True	NA	25	True	AATAAA	-25	NA	2843841	2930073	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_2844025_2875895_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258_2899436_2904763_2905109_2907742_2907845_2908514_2908605_2914883_2915041_2926013_2926113_2928170
H1_mix_00066286	chr4	+	4142	16	FSM	ENSG00000087274.19	ENST00000683351.1	4140	16	-2	0	-2	0	multi-exon	TRUE	canonical	3	22	junction_12	401.231216244311	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTTGTCTAAATCTGGG	-32	True	NA	14	True	AATAAA	-14	NA	2843841	2930062	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_2844025_2875895_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258_2899436_2904763_2905109_2907742_2907845_2908514_2908605_2909338_2909432_2914883_2915041_2926013_2926113_2928170
H1_mix_00066288	chr4	+	3978	16	NIC	ENSG00000087274.19	novel	4079	16	NA	NA	-3	0	intron_retention	FALSE	canonical	3	342	junction_14	236.294787641765	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTTGTCTAAATCTGGG	-20	True	NA	14	True	AATAAA	-14	NA	2843853	2930062	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_2844025_2875895_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258_2899436_2904763_2905016_2907742_2907845_2908514_2908605_2914883_2915041_2926013_2926113_2926641_2926676_2928170
H1_mix_00066291	chr4	+	3923	15	NIC	ENSG00000087274.19	novel	4140	16	NA	NA	3	0	intron_retention	FALSE	canonical	3	599	junction_14	122.586766439622	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTTGTCTAAATCTGGG	1	True	NA	14	True	AATAAA	-14	NA	2843874	2930062	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_2844025_2875895_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258_2899436_2904763_2905016_2907742_2907845_2908514_2908605_2914883_2915041_2926013_2926113_2928170
H1_mix_00066293	chr4	+	3787	14	FSM	ENSG00000087274.19	ENST00000398129.5	3787	14	0	0	0	0	multi-exon	FALSE	canonical	3	599	junction_13	126.100598518586	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGGAAGCAGTTTTATAT	7816	False	NA	28	True	AATAAA	-28	NA	2875895	2930076	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258_2899436_2904763_2905016_2907742_2907845_2908514_2908605_2914883_2915041_2926013_2926113_2928170
H1_mix_00066298	chr4	+	5135	4	FSM	ENSG00000249673.8	ENST00000515194.6	5112	4	-23	0	5	0	multi-exon	FALSE	canonical	1	2	junction_2	9.20144916122817	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGATGGCAGCCCACAC	-33	True	NA	NA	False	AAAACA	-14	NA	2934886	2951683	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_2938143_2938692_2938793_2946872_2947121_2950152
H1_mix_00066302	chr4	+	13494	67	FSM	ENSG00000197386.14	ENST00000355072.11	13472	67	-22	0	-22	0	multi-exon	TRUE	canonical	3	20	junction_1	37.6898560958417	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTGTTGCTGTGTGAGG	NA	False	NA	27	True	ATTAAA	-19	NA	3074658	3243957	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_3075089_3086938_3087023_3099273_3099395_3103823_3103884_3105356_3105437_3107284_3107424_3115303_3115446_3116084_3116264_3121227_3121433_3122888_3122937_3125548_3125630_3127263_3127605_3129923_3130048_3130304_3130424_3131285_3131398_3131637_3131776_3132561_3132721_3132813_3132912_3134400_3134541_3135903_3135968_3136225_3136327_3140509_3140657_3142765_3142887_3145151_3145229_3146796_3146949_3148004_3148208_3154292_3154420_3157071_3157200_3160281_3160393_3172319_3172398_3172907_3173132_3174720_3174800_3174945_3175108_3177331_3177388_3178297_3178447_3180514_3180652_3182353_3182471_3186596_3186720_3187650_3187887_3188950_3189094_3199731_3199940_3204006_3204149_3206495_3206676_3206806_3206984_3207280_3207358_3208772_3208912_3209826_3209950_3211928_3212143_3212563_3212710_3213957_3214136_3215109_3215212_3217764_3217953_3220181_3220309_3222386_3222488_3223405_3223561_3223991_3224132_3225660_3225744_3228614_3228746_3228879_3229010_3229886_3230043_3233162_3233354_3235283_3235399_3235564_3235779_3236148_3236255_3238446_3238610_3238817_3238979_3239845
H1_mix_00066304	chr4	+	5599	17	ISM	ENSG00000159788.20	ENST00000336727.8	4753	18	-10	7663	-10	0	5prime_fragment	FALSE	canonical	3	27	junction_16	10.2024430285104	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGAAATATCACACATTTT	-15	True	NA	14	True	AATAAA	-15	NA	3293010	3432250	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_3293100_3316069_3318052_3342936_3343054_3386415_3386438_3414071_3414242_3414751_3414845_3415977_3416122_3416912_3417093_3417387_3417542_3420641_3420719_3422375_3422571_3422904_3422979_3423514_3423642_3425463_3425561_3428089_3428170_3428557_3428712_3430406
H1_mix_00066306	chr4	+	4726	17	NIC	ENSG00000159788.20	novel	4753	18	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	2	8	junction_3	15.4145831925485	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCGTCGGCCTGGTGCTGG	-2	True	NA	7	True	AATAAA	-17	NA	3293023	3439911	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_3293100_3316069_3318052_3342936_3343054_3414071_3414242_3414751_3414845_3415977_3416122_3416912_3417093_3417387_3417542_3420641_3420719_3422375_3422571_3422904_3422979_3423514_3423642_3425463_3425561_3428089_3428170_3428557_3428712_3430406_3430956_3439454
H1_mix_00066307	chr4	+	4715	18	FSM	ENSG00000159788.20	ENST00000336727.8	4753	18	29	9	22	-1	multi-exon	FALSE	canonical	3	18	junction_17	12.0638440051225	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACCCAAGCGTCGGCCTG	24	True	NA	0	True	AATAAA	-10	NA	3293049	3439904	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_3293100_3316069_3318052_3342936_3343054_3386415_3386438_3414071_3414242_3414751_3414845_3415977_3416122_3416912_3417093_3417387_3417542_3420641_3420719_3422375_3422571_3422904_3422979_3423514_3423642_3425463_3425561_3428089_3428170_3428557_3428712_3430406_3430956_3439454
H1_mix_00066311	chr4	+	3649	2	Antisense	novelGene_ENSG00000253917.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	114	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGGTGGTCTCTTCAC	NA	False	NA	16	True	AATAAA	-24	NA	3927750	3933046	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_+_3927996_3929642
H1_mix_00066313	chr4	+	615	2	Antisense	novelGene_ENSG00000253917.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	71	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	14	True	AATAAA	-22	NA	3927762	3933044	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_+_3927996_3932662
H1_mix_00066314	chr4	+	606	2	Antisense	novelGene_ENSG00000253917.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	54	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	14	True	AATAAA	-22	NA	3927774	3933044	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_+_3927996_3932659
H1_mix_00066317	chr4	+	2871	5	FSM	ENSG00000168824.15	ENST00000621129.5	2279	5	-592	0	-28	0	multi-exon	FALSE	canonical	3	120	junction_1	55.2330290677598	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTGCCCAGTGGACT	143	False	NA	12	True	AATAAA	-14	NA	4386509	4419058	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_4387174_4387603_4387759_4391474_4391592_4409572_4409684_4417234
H1_mix_00066318	chr4	+	2790	6	FSM	ENSG00000168824.15	ENST00000397958.5	2650	6	-143	3	-143	-3	multi-exon	TRUE	canonical	2	8	junction_1	95.6460140309046	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGTGCTGCCCAGTGG	380	False	NA	9	True	AATAAA	-11	NA	4386112	4419055	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_4386644_4387118_4387174_4387603_4387759_4391474_4391592_4409572_4409684_4417234
H1_mix_00066325	chr4	+	6444	21	FSM	ENSG00000072840.13	ENST00000264956.11	6427	21	-17	0	-17	0	multi-exon	FALSE	canonical	2	8	junction_20	22.561028345357	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCCTCTGACCTGTACTT	-7	True	NA	7	True	NA	NA	NA	5711183	5814305	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_5711555_5719247_5719374_5729306_5729391_5731424_5731658_5733350_5733436_5741715_5741815_5745203_5745342_5748147_5748307_5752835_5753053_5753784_5753934_5756263_5756363_5783551_5783765_5793607_5793718_5797021_5797233_5798585_5798793_5801949_5802095_5804729_5804842_5808200_5808328_5809517_5809612_5810338_5810451_5810952
H1_mix_00066326	chr4	+	6467	24	NNC	ENSG00000072840.13	novel	6427	21	NA	NA	-7	6145	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_15	22.6472080011145	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGAGCTTCCAGTCTGAG	3	True	NA	NA	False	AAGAAA	-16	NA	5711193	5820450	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_5711555_5719247_5719374_5729306_5729391_5731424_5731658_5733350_5733436_5741715_5741815_5745203_5745342_5748147_5748307_5752835_5753053_5753784_5753934_5756263_5756363_5783551_5783765_5793607_5793718_5797021_5797233_5798585_5798793_5801749_5801833_5801949_5802095_5804729_5804842_5808200_5808328_5809517_5809612_5810338_5810451_5810952_5814163_5818210_5818255_5820401
H1_mix_00066329	chr4	+	3265	8	FSM	ENSG00000109501.15	ENST00000503569.5	3255	8	-10	0	-10	0	multi-exon	FALSE	canonical	3	44	junction_1	59.7122350980782	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAGCATTTCTTATTTGT	-11	True	NA	26	True	TTTAAA	-29	NA	6269838	6302883	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_6270015_6277454_6277688_6287092_6287176_6288986_6289132_6291196_6291368_6291916_6291998_6295040_6295190_6300656
H1_mix_00066330	chr4	+	3643	8	FSM	ENSG00000109501.15	ENST00000673991.1	3633	8	-10	0	-10	0	multi-exon	FALSE	canonical	1	2	junction_6	86.9050619694754	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTGAGTGGCTGAAATAAA	-11	True	NA	-9	True	NA	NA	NA	6269838	6303225	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_6270015_6277454_6277688_6287092_6287176_6288986_6289132_6291196_6291368_6291916_6291998_6295004_6295190_6300656
H1_mix_00066332	chr4	+	662	2	FSM	ENSG00000109501.15	ENST00000513395.1	570	2	-92	0	-92	0	multi-exon	FALSE	canonical	3	240	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGACTTCTTCGCCTTCTTC	NA	False	NA	NA	False	NA	NA	NA	6294678	6300807	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_6295190_6300656
H1_mix_00066333	chr4	+	4180	19	FSM	ENSG00000013288.9	ENST00000285599.8	5129	19	-15	964	-15	-3	multi-exon	TRUE	canonical	3	14	junction_12	6.42453822138406	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAATTTTATGGTCTGTGA	-17	True	NA	10	True	ATTAAA	-12	NA	6575173	6622398	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_6575349_6576577_6576725_6578392_6578499_6586995_6587169_6589044_6589161_6593172_6593351_6594533_6594733_6597112_6597304_6598197_6598355_6600622_6600757_6605054_6605330_6609106_6609299_6609797_6610051_6610879_6610991_6611085_6611279_6614217_6614356_6617379_6617493_6619926_6620045_6621187
H1_mix_00066335	chr4	+	1574	2	FSM	ENSG00000179010.16	ENST00000382581.5	1574	2	0	0	0	0	multi-exon	FALSE	canonical	3	672	junction_1	0	683	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACGAAAGACCTAAAAGGTT	-4	True	NA	21	True	AATAAA	-21	NA	6640684	6642729	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_6641259_6641729
H1_mix_00066336	chr4	+	2045	1	FSM	ENSG00000170846.17	ENST00000635031.1	2045	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGGTAAGGTAAATAAAC	15	False	NA	-25	True	NA	NA	NA	6673968	6676013	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_6674000_6676000
H1_mix_00066337	chr4	+	1690	2	FSM	ENSG00000170846.17	ENST00000444232.3	1605	2	-119	34	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGGTAAGGTAAATAAAC	15	False	NA	-25	True	NA	NA	NA	6673968	6676013	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_6674638_6674992
H1_mix_00066338	chr4	+	2232	2	FSM	ENSG00000170846.17	ENST00000307533.10	2311	2	79	0	79	0	multi-exon	FALSE	canonical	3	30	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTCCTTGATAGTGGTC	81	False	NA	9	True	AATAAA	-16	NA	6673529	6676047	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_6674707_6674992
H1_mix_00066342	chr4	+	4887	14	FSM	ENSG00000132405.19	ENST00000448507.5	4887	14	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	86.4933557663014	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCACCATCGTTTGTTTA	188	False	NA	27	True	AATAAA	-24	NA	6909443	7033118	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_6909506_6923372_6924112_6967303_6967425_6994183_6994303_6996324_6996408_6999084_6999203_7001144_7001252_7004843_7004925_7006631_7006727_7009876_7009949_7010652_7010782_7014447_7014558_7025003_7025263_7030326
H1_mix_00066343	chr4	+	4947	14	FSM	ENSG00000132405.19	ENST00000409757.9	4947	14	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	73.7825848184055	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGTTCACCATCGTTTG	17	True	NA	23	True	AATAAA	-20	NA	6909825	7033114	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_6909952_6923372_6924112_6967303_6967425_6994183_6994303_6996324_6996408_6999084_6999203_7001144_7001252_7004843_7004925_7006631_7006727_7009876_7009949_7010652_7010782_7014447_7014558_7025003_7025263_7030326
H1_mix_00066345	chr4	+	4162	12	FSM	ENSG00000132405.19	ENST00000451522.6	4149	12	-13	0	-13	0	multi-exon	FALSE	canonical	3	161	junction_1	42.5361295142093	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGTTCACCATCGTTTG	NA	False	NA	23	True	AATAAA	-20	NA	6987148	7033114	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_6987350_6994183_6994303_6996324_6996408_6999084_6999203_7001144_7001252_7004843_7004925_7006631_7006727_7009876_7009949_7010652_7010782_7014447_7014558_7025003_7025263_7030326
H1_mix_00066349	chr4	+	2044	7	FSM	ENSG00000170801.10	ENST00000382512.3	2023	7	-23	2	0	-2	multi-exon	FALSE	canonical	2	6	junction_6	6.03922364399781	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCCAGTTAATCTAAAGTT	0	True	NA	12	True	AATAAA	-14	NA	8269753	8296472	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_8270354_8282436_8282537_8286560_8286784_8291369_8291565_8292320_8292354_8294086_8294202_8295694
H1_mix_00066351	chr4	+	1767	2	NNC	ENSG00000155275.19	novel	770	2	NA	NA	6	983	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGTGTCTGAGGAGTTTT	6	True	NA	28	True	AATAAA	-17	NA	8436145	8440284	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_8436400_8438771
H1_mix_00066352	chr4	+	2874	11	FSM	ENSG00000155275.19	ENST00000389737.5	2874	11	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	15.1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGCCACTCTAAGTGGC	-15	True	NA	18	True	AATAAA	-20	NA	8440776	8476555	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_8441442_8446475_8446591_8449668_8449889_8451959_8452029_8452881_8452990_8454741_8454814_8463984_8464092_8465377_8465562_8467913_8468347_8471083_8471201_8475771
H1_mix_00066355	chr4	+	2183	10	FSM	ENSG00000109625.19	ENST00000315782.6	2136	10	-47	0	1	0	multi-exon	FALSE	canonical	3	25	junction_1	48.297688005397	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCACTGGAATGAGAGGA	57	False	NA	28	True	ATTAAA	-15	NA	8592708	8619749	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_8592922_8601122_8601498_8603975_8604189_8605988_8606186_8606736_8606899_8607266_8607426_8612026_8612163_8614358_8614499_8618428_8618529_8619261
H1_mix_00066361	chr4	+	4010	3	FSM	ENSG00000287778.2	ENST00000656610.1	4065	3	55	0	55	0	multi-exon	FALSE	canonical	1	1	junction_1	1	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATACCCCAGTATTCTGT	72	False	NA	NA	False	TATAAA	-7	NA	11429746	11438505	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_11433320_11434320_11434416_11438163
H1_mix_00066363	chr4	+	1322	1	FSM	ENSG00000205940.8	ENST00000507090.2	2176	1	-12	866	-12	-511	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAATCCACAAGGACTCC	83	False	NA	NA	False	AAGAAA	-32	NA	13336469	13337791	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_13336500_13337800
H1_mix_00066364	chr4	+	607	1	FSM	ENSG00000266240.1	ENST00000578707.1	93	1	43	-557	43	557	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAGATAAATTAAGTATGT	NA	False	NA	NA	False	NA	NA	NA	13627907	13628514	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_13627900_13628500
H1_mix_00066366	chr4	+	774	3	FSM	ENSG00000048342.18	ENST00000652443.1	754	3	-20	0	-8	0	multi-exon	FALSE	canonical	3	12	junction_2	15.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCCAGTCTCAGATATTC	5	False	NA	NA	False	AATAAA	-18	NA	15479195	15481713	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_15479329_15480703_15480828_15481196
H1_mix_00066368	chr4	+	935	6	ISM	ENSG00000048342.18	ENST00000651385.1	3427	15	12	28613	12	-9	5prime_fragment	FALSE	canonical	3	29	junction_5	6.01996677731696	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTAAATAATGTGGCTT	3	True	NA	0	True	ATTAAA	-28	NA	15479227	15511663	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_15479329_15480703_15480828_15502428_15502518_15502821_15502924_15510138_15510241_15511246
H1_mix_00066369	chr4	+	605	3	FSM	ENSG00000237765.8	ENST00000502502.5	588	3	-17	0	7	0	multi-exon	FALSE	canonical	3	10	junction_1	19.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTGTCTAAAAAACAAAAT	1	True	NA	-33	True	AATGAA	-2	NA	15681739	15686568	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_15681902_15684849_15684960_15686235
H1_mix_00066371	chr4	+	1044	2	FSM	ENSG00000237765.8	ENST00000503617.1	1027	2	-17	0	7	0	multi-exon	FALSE	canonical	3	113	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATCTGGAATTGTGAAT	1	True	NA	NA	False	AATATA	-25	NA	15681739	15687050	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_15681969_15686235
H1_mix_00066372	chr4	+	3789	3	FSM	ENSG00000237765.8	ENST00000507305.5	800	3	-4	-2985	-4	0	multi-exon	FALSE	canonical	3	100	junction_2	68.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCTGTGAATAGCTCATA	-9	True	NA	5	True	AATAAA	-15	NA	15681786	15690447	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_15681902_15686235_15686463_15687000
H1_mix_00066376	chr4	+	4291	2	FSM	ENSG00000237765.8	ENST00000422728.3	4287	2	-4	0	0	0	multi-exon	FALSE	canonical	3	237	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCTGTGAATAGCTCATA	-15	True	NA	5	True	AATAAA	-15	NA	15681822	15690447	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_15681902_15686235
H1_mix_00066377	chr4	+	958	4	FSM	ENSG00000237765.8	ENST00000502856.5	958	4	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_3	11.0252236056942	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTCTTTGTATTTCTTA	23	False	NA	12	True	AATAAA	-14	NA	15681860	15688972	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_15682022_15686235_15686463_15687000_15687149_15688550
H1_mix_00066378	chr4	+	1752	1	NIC	ENSG00000263327.6	novel	2165	3	NA	NA	28000	52	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCGTTCAGGACTCGCAG	NA	False	NA	NA	False	NA	NA	NA	16255044	16256796	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_16255000_16256800
H1_mix_00066386	chr4	+	900	3	FSM	ENSG00000145147.20	ENST00000508541.1	2947	3	2047	0	2047	0	multi-exon	FALSE	canonical	2	4	junction_2	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAATGC	NA	False	NA	NA	False	AATAAA	-21	NA	20616909	20619166	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_20617199_20617438_20617651_20618767
H1_mix_00066388	chr4	+	6309	9	FSM	ENSG00000163138.19	ENST00000503585.6	6309	9	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_8	7.8491639682198	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTTTTGTTTCAGTAAA	2	True	NA	NA	False	ATTAAA	-17	NA	20700457	20732557	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_20700788_20704465_20704534_20704659_20704815_20707802_20707871_20709682_20709774_20712787_20712923_20713431_20713540_20724807_20724889_20727284
H1_mix_00066397	chr4	+	1515	9	FSM	ENSG00000168228.16	ENST00000505451.5	1504	9	-11	0	0	0	multi-exon	FALSE	canonical	3	4	junction_8	43.6999713958716	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGACTACAAACATGTGCCA	-17	True	NA	NA	False	NA	NA	NA	25312773	25352541	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_25312937_25314045_25314165_25315317_25315401_25333182_25333459_25333907_25333989_25345547_25345621_25349491_25349643_25351588_25351690_25352073
H1_mix_00066413	chr4	+	6221	12	NNC	ENSG00000168214.22	novel	5395	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	384.664735422531	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTCTGTCGAATGTGCCT	393	False	NA	23	True	AATAAA	-29	NA	26319661	26434923	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_26320174_26320699_26321049_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
H1_mix_00066423	chr4	+	5398	11	FSM	ENSG00000168214.22	ENST00000355476.8	5395	11	-3	0	0	0	multi-exon	FALSE	canonical	3	479	junction_1	227.113385778998	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTCTGTCGAATGTGCCT	-2	True	NA	23	True	AATAAA	-29	NA	26321010	26434923	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_26321049_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
H1_mix_00066427	chr4	+	5761	11	FSM	ENSG00000168214.22	ENST00000342320.8	5761	11	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_1	232.968152329884	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGAAATGGGCTTTGTCA	NA	False	NA	140	True	TTTAAA	-24	NA	26362435	26435131	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_26362629_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
H1_mix_00066435	chr4	+	6141	13	FSM	ENSG00000109689.19	ENST00000465503.6	3613	13	-158	-2370	-111	955	multi-exon	FALSE	canonical	3	40	junction_9	42.3952139594397	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTACTGTTTTTCTAAAT	2941	False	NA	NA	False	NA	NA	NA	26860682	27026336	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_26861370_26919503_26919635_26957611_26957727_26995378_26995491_26999231_26999348_27002216_27002395_27002926_27003105_27007532_27007701_27007982_27008007_27008427_27008529_27008763_27009003_27017710_27017985_27022518
H1_mix_00066436	chr4	+	5004	12	FSM	ENSG00000109689.19	ENST00000467087.7	5004	12	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_8	27.84965539796	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAT	5	True	NA	NA	False	TTTAAA	-21	NA	26860840	27025381	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_26861370_26919503_26919635_26957611_26957727_26995378_26995491_26999231_26999348_27002216_27002395_27002926_27003105_27007532_27007701_27008427_27008529_27008763_27009003_27017710_27017985_27022518
H1_mix_00066437	chr4	+	6414	2	FSM	ENSG00000169851.15	ENST00000361762.3	6403	2	0	-11	0	11	multi-exon	FALSE	canonical	3	46	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTTATTGACCAGATACAG	35	False	NA	15	True	ATTAAA	-29	NA	30720414	30732984	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_30724597_30730752
H1_mix_00066439	chr4	+	4457	1	FSM	ENSG00000169851.15	ENST00000543491.2	4457	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATACATTGCATGAGCC	253	False	NA	NA	False	ATTAAA	-12	NA	30720852	30725309	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_30720900_30725300
H1_mix_00066443	chr4	+	1582	3	FSM	ENSG00000065882.17	ENST00000402522.1	1567	3	-15	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	9.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATGTCCATCTCTTGAA	-15	True	NA	0	True	AATAAA	-21	NA	37891083	37952812	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_37891349_37902002_37902513_37952005
H1_mix_00066444	chr4	+	5703	20	FSM	ENSG00000065882.17	ENST00000261439.9	5703	20	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	103.043357466678	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATGGTGGTTTTTTTT	-15	True	NA	19	True	AATAAA	-24	NA	37891083	38139173	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_37891349_37902002_37902513_38014508_38014974_38018353_38018444_38020590_38020696_38021585_38021719_38027787_38027880_38035587_38035699_38044361_38044491_38045816_38045904_38049617_38049899_38054198_38054339_38089931_38090118_38095928_38096091_38102998_38103158_38115709_38115955_38118032_38118193_38124961_38125132_38133083_38133258_38137134
H1_mix_00066445	chr4	+	7538	19	NNC	ENSG00000065882.17	novel	2977	17	NA	NA	-18	2409	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_10	75.7160264849303	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAATAATGAGCACTTCA	2	True	NA	NA	False	GATAAA	-19	NA	37977291	38141584	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_37977530_38014508_38014974_38018353_38018444_38020590_38020696_38021585_38021719_38027787_38027880_38035587_38035699_38044361_38044491_38045816_38045904_38049617_38049860_38054198_38054339_38089931_38090118_38095928_38096091_38102998_38103158_38115709_38115955_38118032_38118193_38124961_38125132_38133083_38133258_38137134
H1_mix_00066446	chr4	+	5433	21	NIC	ENSG00000065882.17	novel	2977	17	NA	NA	-5	-2	combination_of_known_junctions	FALSE	canonical	3	20	junction_11	110.741263763784	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTTATGGTGGTTTTTT	15	True	NA	17	True	AATAAA	-22	NA	37977304	38139171	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_37977530_38014508_38014974_38018353_38018444_38020590_38020696_38021585_38021719_38027787_38027880_38035587_38035699_38044361_38044491_38045816_38045904_38049617_38049899_38051898_38052061_38053105_38053226_38054198_38054339_38089931_38090118_38095928_38096091_38102998_38103158_38115709_38115955_38118032_38118193_38124961_38125132_38133083_38133258_38137134
H1_mix_00066447	chr4	+	5321	20	NIC	ENSG00000065882.17	novel	2977	17	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_11	88.7769778746383	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATGGTGGTTTTTTTT	9	True	NA	19	True	AATAAA	-24	NA	37977298	38139173	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_37977530_38014508_38014974_38018353_38018444_38020590_38020696_38021585_38021719_38027787_38027880_38035587_38035699_38044361_38044491_38045816_38045904_38049617_38049899_38051898_38052061_38054198_38054339_38089931_38090118_38095928_38096091_38102998_38103158_38115709_38115955_38118032_38118193_38124961_38125132_38133083_38133258_38137134
H1_mix_00066448	chr4	+	5157	19	NIC	ENSG00000065882.17	novel	2977	17	NA	NA	-11	-2	combination_of_known_junctions	FALSE	canonical	3	255	junction_10	42.1247779054115	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTTATGGTGGTTTTTT	9	True	NA	17	True	AATAAA	-22	NA	37977298	38139171	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_37977530_38014508_38014974_38018353_38018444_38020590_38020696_38021585_38021719_38027787_38027880_38035587_38035699_38044361_38044491_38045816_38045904_38049617_38049899_38054198_38054339_38089931_38090118_38095928_38096091_38102998_38103158_38115709_38115955_38118032_38118193_38124961_38125132_38133083_38133258_38137134
H1_mix_00066452	chr4	+	4060	15	FSM	ENSG00000197712.12	ENST00000358869.5	4060	15	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	20.2016618835467	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGATTGCCAGAAATGTTT	4	True	NA	11	True	ATTAAA	-15	NA	38867805	38945739	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_38867835_38868397_38868547_38878070_38878427_38891742_38891831_38905521_38905636_38905754_38905862_38908591_38908727_38914920_38915074_38922769_38922894_38929241_38929334_38931450_38931613_38932234_38932375_38935717_38935791_38940967_38941022_38943455
H1_mix_00066454	chr4	+	3962	14	NIC	ENSG00000197712.12	novel	4060	15	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_9	10.915490323118	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGATTGCCAGAAATGTTT	-1	True	NA	11	True	ATTAAA	-15	NA	38867754	38945739	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_38867835_38878070_38878427_38891742_38891831_38905521_38905636_38905754_38905862_38908591_38908727_38914920_38915074_38922769_38922894_38929241_38929334_38931450_38931613_38932234_38932375_38935717_38935791_38940967_38941022_38943455
H1_mix_00066455	chr4	+	7840	12	NNC	ENSG00000109790.18	novel	3425	12	NA	NA	-400	-6	at_least_one_novel_splicesite	TRUE	canonical	2	9	junction_1	66.8789457783969	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTGACTAGATAATACTCA	-23	True	NA	2	True	AATAAA	-17	NA	39044638	39126227	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_39045097_39062561_39063036_39075964_39076148_39081102_39081240_39081962_39082160_39086514_39086728_39096691_39096879_39103286_39103512_39107568_39107732_39113019_39113233_39115158_39115331_39121009
H1_mix_00066456	chr4	+	3425	12	FSM	ENSG00000109790.18	ENST00000261425.7	3425	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	64.9213128294871	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGATGTCTAAGATGCTT	38	False	NA	11	True	GATAAA	-20	NA	39045038	39122209	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_39045097_39062558_39063036_39075964_39076148_39081102_39081240_39081962_39082160_39086514_39086728_39096691_39096879_39103286_39103512_39107568_39107732_39113019_39113233_39115158_39115331_39121009
H1_mix_00066460	chr4	+	4395	37	FSM	ENSG00000157796.18	ENST00000399820.8	4395	37	0	0	0	0	multi-exon	FALSE	canonical	2	29	junction_12	13.0373099455863	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTGACGTTTTTCTGG	9	True	NA	13	True	AATAAA	-14	NA	39182528	39285810	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_39182564_39185725_39185818_39186538_39186605_39189655_39189782_39194543_39194660_39199477_39199594_39203641_39203723_39205153_39205267_39205562_39205737_39214600_39214672_39215840_39216014_39216095_39216211_39217133_39217241_39217982_39218106_39224883_39225034_39228209_39228358_39228485_39228691_39231796_39231957_39232161_39232273_39234765_39234876_39240276_39240335_39244247_39244389_39244469_39244553_39245368_39245453_39253145_39253293_39253905_39254031_39255847_39255961_39257485_39257555_39266062_39266141_39267994_39268092_39269975_39270101_39272979_39273062_39274807_39274959_39277019_39277144_39278130_39278208_39278538_39278664_39285486
H1_mix_00066462	chr4	+	842	4	FSM	ENSG00000121897.15	ENST00000424936.6	1011	4	-5	174	-3	-174	multi-exon	FALSE	canonical	3	100	junction_1	6.23609564462324	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGTCTTTTAAAATCAT	0	True	NA	NA	False	NA	NA	NA	39459052	39463989	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_39459163_39460789_39460963_39462195_39462290_39463524
H1_mix_00066464	chr4	+	1596	10	FSM	ENSG00000121897.15	ENST00000381846.2	1578	10	-18	0	0	0	multi-exon	TRUE	canonical	3	5	junction_6	29.9481032602883	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATATCTTTGTAAGAAT	-8	True	NA	10	True	ATTAAA	-25	NA	39459044	39477648	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_39459163_39460789_39460963_39462195_39462290_39463524_39463606_39465045_39465203_39465284_39465343_39470018_39470165_39471235_39471307_39473099_39473212_39477062
H1_mix_00066465	chr4	+	2030	4	FSM	ENSG00000121897.15	ENST00000640816.1	2030	4	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_3	7.40870359029762	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAAACAGTTGCTTGCTGT	9781	False	NA	-20	True	NA	NA	NA	39468873	39477618	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_39470165_39471235_39471307_39473099_39473212_39477062
H1_mix_00066468	chr4	+	2265	7	FSM	ENSG00000078140.14	ENST00000438068.6	2262	7	-3	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	446.105244184474	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATATTGTAATGTTAAAG	3	True	NA	8	True	AATAAA	-14	NA	39698135	39779992	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_39698303_39737419_39737514_39745751_39745811_39755656_39755740_39774833_39774934_39777681_39777811_39778359
H1_mix_00066470	chr4	+	2681	5	FSM	ENSG00000078140.14	ENST00000503368.5	891	5	-517	-1273	-463	0	multi-exon	FALSE	canonical	3	41	junction_1	405.015431804765	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATTATTAAATATATTGTA	NA	False	NA	-1	True	AATAAA	-5	NA	39697645	39779983	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_39698391_39755656_39755740_39774833_39774934_39777681_39777811_39778359
H1_mix_00066471	chr4	+	2188	6	FSM	ENSG00000078140.14	ENST00000445950.2	2175	6	-13	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	448.597547920182	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATTATTAAATATATTGTA	-4	True	NA	-1	True	AATAAA	-5	NA	39698162	39779983	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_39698391_39737419_39737514_39745751_39745811_39755656_39755740_39774833_39774934_39778359
H1_mix_00066473	chr4	+	9720	18	FSM	ENSG00000078177.14	ENST00000261435.11	9720	18	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	26.8941279398879	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAGTGTGAGGAAATCCT	-15	True	NA	14	True	AATAAA	-15	NA	40056849	40158252	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_40057031_40073454_40073552_40097226_40097570_40102074_40103219_40106899_40107025_40112083_40112173_40113431_40113509_40117868_40118025_40119931_40122310_40123126_40123213_40124159_40124206_40126133_40126331_40131800_40131920_40136943_40137083_40142672_40142862_40144631_40144801_40152779_40152904_40154191
H1_mix_00066474	chr4	+	9747	19	FSM	ENSG00000078177.14	ENST00000511480.5	9747	19	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	36.4034322082851	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCAGTGTGAGGAAATCC	48	True	NA	13	True	AATAAA	-14	NA	40056912	40158251	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_40057031_40073454_40073552_40097226_40097570_40100035_40100127_40102074_40103219_40106899_40107025_40112083_40112173_40113431_40113509_40117868_40118025_40119931_40122310_40123126_40123213_40124159_40124206_40126133_40126331_40131800_40131920_40136943_40137083_40142672_40142862_40144631_40144801_40152779_40152904_40154191
H1_mix_00066479	chr4	+	1768	6	FSM	ENSG00000179299.17	ENST00000473399.5	1759	6	-9	0	0	0	multi-exon	FALSE	canonical	3	162	junction_4	29.5472502950782	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGTAGTTTAAATTCA	10	True	NA	NA	False	AATAAA	-7	NA	40749954	40775456	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_40750301_40750602_40750992_40760433_40760493_40761170_40761302_40774264_40774418_40774766
H1_mix_00066480	chr4	+	4839	12	FSM	ENSG00000179299.17	ENST00000381782.7	4839	12	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_10	78.1193196282044	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTTTTCTTCTTTGAG	10	True	NA	NA	False	ATTAAA	-17	NA	40749954	40811184	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_40750301_40750602_40750992_40760433_40760493_40761170_40761302_40774264_40774418_40774766_40774951_40776048_40776260_40790601_40790746_40794374_40794477_40798786_40798905_40807060_40807185_40808306
H1_mix_00066481	chr4	+	1757	8	NNC	ENSG00000179299.17	novel	3546	11	NA	NA	8	10372	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_7	76.740750955036	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATGCCCAACTCTGTTG	27	True	NA	10	True	ATTAAA	-20	NA	40749971	40786848	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_40750301_40750602_40750992_40760433_40760493_40761170_40761302_40774264_40774418_40774766_40774951_40776048_40776260_40786547
H1_mix_00066482	chr4	+	2045	7	ISM	ENSG00000179299.17	ENST00000316607.5	3546	11	-226	33410	-226	99	5prime_fragment	FALSE	canonical	3	108	junction_6	45.5829524664162	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTGCTTAAGTGACAAAG	NA	False	NA	NA	False	AATAAA	-33	NA	40749698	40776575	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_40750301_40750602_40750992_40760433_40760493_40761170_40761302_40774264_40774418_40774766_40774951_40776048
H1_mix_00066484	chr4	+	1248	10	FSM	ENSG00000154277.13	ENST00000503431.5	917	10	-160	-171	-160	0	multi-exon	FALSE	canonical	1	47	junction_1	921.275256785632	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCACAGCTGATTCTCAT	NA	False	NA	27	True	AATAAA	-19	NA	41256608	41268427	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_41256804_41256949_41257010_41257114_41257127_41257608_41257738_41260646_41260798_41261714_41261801_41261875_41261924_41263224_41263292_41264102_41264162_41267986
H1_mix_00066485	chr4	+	1131	9	FSM	ENSG00000154277.13	ENST00000284440.9	1103	9	-55	27	-35	0	multi-exon	FALSE	canonical	3	2216	junction_2	269.248026919419	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCACAGCTGATTCTCATT	NA	False	NA	28	True	AATAAA	-20	NA	41256872	41268428	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_41257010_41257114_41257127_41257608_41257738_41260646_41260798_41261714_41261801_41261875_41261924_41263224_41263292_41264102_41264162_41267986
H1_mix_00066486	chr4	+	1578	8	FSM	ENSG00000154277.13	ENST00000381760.8	1578	8	0	0	0	0	multi-exon	FALSE	canonical	3	2776	junction_6	118.673278115907	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCACAGCTGATTCTCATT	NA	False	NA	28	True	AATAAA	-20	NA	41256907	41268428	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_41257010_41257114_41257738_41260646_41260798_41261714_41261801_41261875_41261924_41263224_41263292_41264102_41264162_41267986
H1_mix_00066489	chr4	+	6063	25	NIC	ENSG00000064042.18	novel	5071	26	NA	NA	-13	0	intron_retention	FALSE	canonical	1	6	junction_1	5.75905084772366	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTATTCCATTAATTAT	4	True	NA	3	True	AATAAA	-14	NA	41360771	41700044	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_41360937_41494535_41494607_41524408_41524479_41598919_41599027_41603874_41603906_41605893_41606005_41613465_41613662_41619187_41619441_41644499_41644627_41646122_41646281_41646484_41646894_41650392_41650609_41661419_41661511_41662820_41662985_41666560_41666667_41671553_41671595_41676381_41676463_41680005_41680099_41680954_41681060_41682332_41682461_41684396_41684519_41685709_41685831_41689526_41689636_41692281_41692385_41697159
H1_mix_00066494	chr4	+	8985	8	NNC	ENSG00000109133.13	novel	7404	7	NA	NA	-4	1344	intron_retention	FALSE	canonical	3	6	junction_7	99.0777884455709	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTGAGTTTGTGAATTT	-7	True	NA	NA	False	AATAAA	-14	NA	41935147	41962147	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_41935530_41938601_41938697_41939195_41939384_41943746_41943815_41944792_41944927_41949301_41949386_41954069_41956105_41956148
H1_mix_00066495	chr4	+	7404	7	FSM	ENSG00000109133.13	ENST00000504986.6	7404	7	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_5	25.2151850192608	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTTGATTCTGTACT	0	True	NA	19	True	AAAAAG	-29	NA	41935428	41960803	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_41935530_41938601_41938697_41939195_41939384_41943746_41943815_41944792_41944927_41949301_41949386_41954069
H1_mix_00066497	chr4	+	2376	17	ISM	ENSG00000014824.14	ENST00000264451.12	6164	18	9	11535	9	75	5prime_fragment	FALSE	canonical	3	548	junction_16	52.3305300470003	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTTTTTCTGCAGTTGA	18	True	NA	40	True	AATAAA	-42	NA	41990538	42078926	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_41990761_42001615_42001781_42018110_42018171_42020415_42020516_42022837_42022931_42023301_42023385_42035274_42035334_42038985_42039054_42049376_42049480_42060190_42060247_42062985_42063122_42065309_42065350_42066549_42066622_42067084_42067193_42070525_42070692_42075656_42075787_42078211
H1_mix_00066499	chr4	+	2322	2	FSM	ENSG00000178343.5	ENST00000319234.5	2322	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATTTTAATGTGATTC	7	True	NA	19	True	AATAAA	-30	NA	42397487	42402487	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_42398334_42401011
H1_mix_00066509	chr4	+	549	6	FSM	ENSG00000109180.15	ENST00000509664.5	538	6	-11	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	364.740675000746	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTCCATCCCTAAACTTAT	NA	False	NA	-83	True	NA	NA	NA	48830997	48848424	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_48831053_48831226_48831497_48832619_48832683_48833400_48833482_48842635_48842690_48848398
H1_mix_00066511	chr4	+	1213	6	FSM	ENSG00000109180.15	ENST00000512981.5	1209	6	-4	0	-4	0	multi-exon	FALSE	canonical	2	4	junction_1	311.618099602703	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTGCAACAACATCAAT	-23	True	NA	NA	False	NA	NA	NA	48831054	48852504	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_48831250_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805
H1_mix_00066512	chr4	+	1596	9	FSM	ENSG00000109180.15	ENST00000381473.7	1594	9	-2	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	214.2782945144	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTATCTTAATGTTTAT	4	True	NA	-19	True	ATTAAA	-25	NA	48831081	48861200	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_48831497_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48851976_48857212_48857366_48860724
H1_mix_00066513	chr4	+	1964	9	FSM	ENSG00000109180.15	ENST00000264312.12	1958	9	-6	0	0	0	multi-exon	FALSE	canonical	3	574	junction_1	86.499187134909	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGACTGATATTATGTTA	4	True	NA	2	True	AATAAA	-17	NA	48831081	48861815	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_48831250_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48851976_48857212_48857366_48860724
H1_mix_00066514	chr4	+	1780	8	FSM	ENSG00000109180.15	ENST00000444354.6	1756	8	-24	0	0	0	multi-exon	FALSE	canonical	3	39	junction_7	258.261218813157	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAAAACAATAAAAATTTGG	6	True	NA	-27	True	AGTAAA	-44	NA	48831083	48861786	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_48831250_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48851976_48860724
H1_mix_00066517	chr4	+	1915	8	FSM	ENSG00000109180.15	ENST00000425583.6	1915	8	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_7	310.785115079699	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACTGATATTATGTTAAA	4	True	NA	4	True	AATAAA	-19	NA	48831226	48861817	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_48831497_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48851976_48860724
H1_mix_00066518	chr4	+	1288	9	FSM	ENSG00000109180.15	ENST00000513391.2	1288	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	255.255141965838	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCATCTTCCTTGATTT	17	True	NA	31	True	AATAAA	-21	NA	48831341	48861250	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_48831399_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48851976_48857212_48857366_48860724
H1_mix_00066519	chr4	+	1916	2	FSM	ENSG00000109180.15	ENST00000502972.1	1916	2	0	0	0	0	multi-exon	FALSE	canonical	3	785	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCCCTCATCTTCCTTG	5950	False	NA	27	True	AATAAA	-17	NA	48855971	48861246	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_48857366_48860724
H1_mix_00066521	chr4	+	6861	11	FSM	ENSG00000272576.1_ENSG00000109184.15	ENST00000334635.10	4222	11	-98	-2541	-6	-3	multi-exon	FALSE	canonical	3	258	junction_8	69.7352851861954	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGCAACCTGTTCCATGT	NA	False	NA	-1	True	AATAAA	-14	NA	51843054	51919378	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_51843268_51863436_51863508_51863669_51863710_51874270_51874386_51877762_51877855_51886567_51886639_51891759_51891852_51899269_51899379_51911069_51911175_51913289_51913393_51913528
H1_mix_00066528	chr4	+	6058	2	FSM	ENSG00000226950.8	ENST00000441504.2	6065	2	0	7	0	-7	multi-exon	FALSE	canonical	3	1537	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCATCATTTGACTGGA	NA	False	NA	NA	False	ATTAAA	-11	NA	52712404	52718758	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_52712528_52712823
H1_mix_00066529	chr4	+	2115	5	FSM	ENSG00000226950.8	ENST00000675590.1	2115	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	1127.94547740571	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTCAATACATAGTGTCA	NA	False	NA	NA	False	NA	NA	NA	52712453	52721683	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_52712528_52712823_52712960_52713493_52713543_52714198_52714239_52719867
H1_mix_00066530	chr4	+	507	5	FSM	ENSG00000226950.8	ENST00000676199.1	499	5	-8	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	1129.36652597817	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTTATTAGTGCCGTG	-2	True	NA	NA	False	AATATA	-38	NA	52712503	52717188	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_52712528_52712823_52712960_52713493_52713543_52714198_52714239_52716930
H1_mix_00066531	chr4	+	1644	5	FSM	ENSG00000226950.8	ENST00000675988.1	1644	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	1110.27324902476	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAATAGGAAAATGATATAT	-2	True	NA	NA	False	AATAAA	-20	NA	52712503	52721102	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_52712528_52712823_52712960_52713493_52713703_52714198_52714239_52719867
H1_mix_00066532	chr4	+	1093	2	FSM	ENSG00000226950.8	ENST00000425653.2	1059	2	-34	0	0	0	multi-exon	FALSE	canonical	3	2709	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGGTCTCTTGTCTTTTC	6	True	NA	31	True	AATAAA	-16	NA	52712511	52714138	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_52712960_52713493
H1_mix_00066535	chr4	+	2202	18	FSM	ENSG00000145216.16	ENST00000358575.9	2180	18	-22	0	-18	0	multi-exon	FALSE	canonical	3	130	junction_13	117.65626434573	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCCAAGAAAGGAATGTGA	9	False	NA	76	True	AATAAA	-19	NA	53377622	53459668	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_53377924_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53391429_53391499_53399729_53399840_53414614_53414723_53425871_53425966_53428026_53428184_53440581_53440609_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
H1_mix_00066536	chr4	+	3414	18	FSM	ENSG00000145216.16	ENST00000337488.11	3396	18	-18	0	-18	0	multi-exon	FALSE	canonical	3	179	junction_1	107.073916195364	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTATTTGTGATTTTTCTG	9	False	NA	24	True	TATAAA	-36	NA	53377622	53460862	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_53377924_53379072_53379118_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53391429_53391499_53399729_53399840_53414614_53414723_53425871_53425966_53428026_53428184_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
H1_mix_00066537	chr4	+	2028	16	NIC	ENSG00000145216.16	novel	3396	18	NA	NA	-12	-3	combination_of_known_junctions	FALSE	canonical	3	176	junction_9	107.240829703782	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATATCCAAGAAAGGAATG	-1	True	NA	73	True	AATAAA	-16	NA	53377658	53459665	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_53377924_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53391429_53391499_53399729_53399840_53425871_53425966_53428026_53428184_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
H1_mix_00066538	chr4	+	2010	16	NIC	ENSG00000145216.16	novel	3396	18	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	194	junction_7	96.1626862261149	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTGTACTATTTC	12	True	NA	29	True	AATAAA	-30	NA	53377671	53459621	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_53377924_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53399729_53399840_53414614_53414723_53425871_53425966_53428026_53428184_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
H1_mix_00066540	chr4	+	1795	16	NIC	ENSG00000145216.16	novel	3396	18	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_14	135.150188062516	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTGTACTATTTC	19	True	NA	29	True	AATAAA	-30	NA	53377678	53459621	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_53377924_53379072_53379118_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53391429_53391499_53399729_53399840_53425871_53425966_53428026_53428184_53442652_53442708_53444047_53444104_53458652_53458791_53459301
H1_mix_00066541	chr4	+	2026	17	NIC	ENSG00000145216.16	novel	2180	18	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	130	junction_12	115.587882555872	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTGTACTATTTC	23	True	NA	29	True	AATAAA	-30	NA	53377682	53459621	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_53377924_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53399729_53399840_53414614_53414723_53425871_53425966_53428026_53428184_53440581_53440609_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
H1_mix_00066542	chr4	+	2033	17	NIC	ENSG00000145216.16	novel	3396	18	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	176	junction_10	112.266911309611	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTGTACTATTTC	-5	True	NA	29	True	AATAAA	-30	NA	53377654	53459621	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_53377924_53379072_53379118_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53391429_53391499_53399729_53399840_53425871_53425966_53428026_53428184_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
H1_mix_00066543	chr4	+	1943	16	NIC	ENSG00000145216.16	novel	3396	18	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	176	junction_9	108.683148034397	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTGTACTATTTC	16	True	NA	29	True	AATAAA	-30	NA	53377675	53459621	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_53377924_53379072_53379118_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53399729_53399840_53425871_53425966_53428026_53428184_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
H1_mix_00066544	chr4	+	1878	15	FSM	ENSG00000145216.16	ENST00000306932.10	1878	15	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_8	101.481072931189	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTGTACTATTTC	-6	True	NA	29	True	AATAAA	-30	NA	53377695	53459621	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_53377924_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53399729_53399840_53425871_53425966_53428026_53428184_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
H1_mix_00066545	chr4	+	2140	17	NIC	ENSG00000145216.16	novel	2180	18	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	182	junction_8	101.938630435179	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCCAAGAAAGGAATGTGA	-2	True	NA	76	True	AATAAA	-19	NA	53377657	53459668	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_53377924_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53391429_53391499_53399729_53399840_53414614_53414723_53425871_53425966_53428026_53428184_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
H1_mix_00066550	chr4	+	5165	21	FSM	ENSG00000157404.17	ENST00000288135.6	5147	21	-18	0	0	0	multi-exon	FALSE	canonical	3	67	junction_9	79.6018215871974	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGTCATTTGATTGTTG	0	True	NA	15	True	AATAAA	-20	NA	54657938	54740715	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_54658082_54695511_54695782_54698283_54698566_54699629_54699767_54703723_54703893_54707097_54707288_54709423_54709540_54723583_54723699_54725856_54726051_54727217_54727325_54727415_54727543_54727822_54727928_54728010_54728122_54729334_54729486_54731327_54731420_54731870_54731999_54733069_54733193_54736497_54736610_54736720_54736821_54737174_54737281_54738428
H1_mix_00066552	chr4	+	2782	4	FSM	ENSG00000128039.13	ENST00000679836.1	2766	4	-16	0	-16	0	multi-exon	FALSE	canonical	3	23	junction_3	128.224629286091	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAAGTGCTGGGATTACA	79	False	NA	NA	False	NA	NA	NA	55346196	55371911	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_55346558_55359345_55359489_55364073_55364272_55369831
H1_mix_00066556	chr4	+	1931	6	FSM	ENSG00000134851.13	ENST00000381334.10	1931	6	0	0	0	0	multi-exon	FALSE	canonical	3	615	junction_1	23.2120658279266	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTTTCCTTGTGTGTC	-4	True	NA	21	True	AATAAA	-17	NA	55395956	55426175	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_55396397_55411613_55411840_55417071_55417248_55417802_55417986_55424537_55424644_55425375
H1_mix_00066559	chr4	+	4219	2	FSM	ENSG00000134851.13	ENST00000515591.1	1786	2	-1889	-544	-1889	0	multi-exon	FALSE	canonical	3	666	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTTTCCTTGTGTGTC	NA	False	NA	21	True	AATAAA	-17	NA	55421224	55426175	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_55424644_55425375
H1_mix_00066562	chr4	+	3378	19	FSM	ENSG00000090989.18	ENST00000346134.11	3357	19	-21	0	6	0	multi-exon	FALSE	canonical	3	42	junction_1	23.3685580679005	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTCTATCATATGCTGTC	-65	True	NA	27	True	AATAAA	-44	NA	55853653	55905034	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_55853798_55858313_55858448_55860410_55860542_55864226_55864387_55868335_55868524_55870677_55870906_55871100_55871234_55871848_55871959_55877916_55878067_55883822_55883929_55888887_55888933_55890222_55890387_55891314_55891423_55892634_55892712_55893551_55893781_55896716_55896901_55899684_55899885_55902343_55902539_55904342
H1_mix_00066564	chr4	+	3460	18	NIC	ENSG00000090989.18	novel	3592	19	NA	NA	6	-2	combination_of_known_junctions	FALSE	canonical	3	22	junction_10	26.577171045114	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAAAAGTTGACATTTGA	-65	True	NA	-2	True	AATAAA	-15	NA	55853653	55905005	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_55853954_55858313_55858448_55860410_55860542_55864226_55864387_55868335_55868524_55870677_55870906_55871100_55871234_55871848_55871959_55877916_55878067_55883822_55883929_55890222_55890387_55891314_55891423_55892634_55892712_55893551_55893781_55896716_55896901_55899684_55899885_55902343_55902539_55904342
H1_mix_00066566	chr4	+	5596	26	FSM	ENSG00000174799.11	ENST00000257287.5	5596	26	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_14	10.8406641862941	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTCTCTTTCTTACA	-4	True	NA	13	True	AATAAA	-13	NA	55948944	56033361	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_55949060_55952085_55952244_55953084_55953276_55954215_55954384_55957222_55957365_55959681_55959767_55964273_55964403_55965643_55965860_55969062_55969129_55971269_55971409_55974745_55974970_55980142_55980296_55981226_55981380_55985280_55985359_55991933_55992086_55999301_55999418_55999490_55999646_56008326_56008383_56009734_56009904_56011411_56011523_56011799_56011986_56017647_56017858_56019352_56019556_56020675_56020781_56024500_56024615_56031359
H1_mix_00066571	chr4	+	491	2	FSM	ENSG00000128050.9	ENST00000504188.1	491	2	0	0	0	0	multi-exon	FALSE	canonical	3	3074	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGCTCCCTCAAAGTCTC	284	False	NA	NA	False	AATAAA	-41	NA	56436038	56441863	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_56436329_56441662
H1_mix_00066572	chr4	+	6371	9	FSM	ENSG00000128050.9	ENST00000512576.3	6371	9	0	0	0	0	multi-exon	FALSE	canonical	3	2648	junction_2	243.876505633487	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCTTCTTTGTTGTCAG	5	True	NA	2	True	AATAAA	-14	NA	56436259	56464578	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_56436329_56441662_56441861_56446694_56446874_56448417_56448598_56448709_56448824_56450618_56450703_56451871_56452053_56453602_56453762_56459371
H1_mix_00066573	chr4	+	2044	2	NNC	ENSG00000128050.9	novel	3340	10	NA	NA	7482	0	at_least_one_novel_splicesite	FALSE	canonical	3	278	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTTTCATGGTCTCTG	NA	False	NA	25	True	ATTAAA	-18	NA	56456180	56461361	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_56456235_56459371
H1_mix_00066577	chr4	+	1447	4	FSM	ENSG00000196503.5	ENST00000640821.3	1447	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	1.24721912892465	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTGTCCCATTTATTGT	0	True	NA	NA	False	AATGAA	-10	NA	56505790	56524453	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_56506142_56511184_56511348_56518677_56518854_56523696
H1_mix_00066578	chr4	+	7309	4	FSM	ENSG00000084093.19	ENST00000309042.12	7309	4	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_1	43.4920171474669	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCCTTTGTTTATTATT	-13	True	NA	9	True	AATAAA	-14	NA	56907899	56935844	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_56908214_56910629_56911537_56919786_56919871_56929840
H1_mix_00066579	chr4	+	7568	4	NIC	ENSG00000084093.19	novel	7069	5	NA	NA	351	0	intron_retention	FALSE	canonical	3	64	junction_1	132.033665740556	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAATAAAGTTTTAAAAAC	324	False	NA	-13	True	NA	NA	NA	56908444	56935822	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_56909040_56910629_56911537_56919786_56919871_56929840
H1_mix_00066595	chr4	+	356	1	FSM	ENSG00000270257.1	ENST00000604441.1	183	1	-279	106	-279	-106	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTGCCAAGAAGACAGAC	5058	False	NA	NA	False	AAAACA	-25	NA	67637897	67638253	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_67637900_67638300
H1_mix_00066597	chr4	+	2576	3	FSM	ENSG00000248049.8	ENST00000654961.1	2595	3	19	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	12.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTCTCCAAATATTTTA	8	True	NA	-9	True	NA	NA	NA	67701279	67723217	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_67701485_67720421_67721052_67721476
H1_mix_00066607	chr4	+	6952	6	FSM	ENSG00000173542.9	ENST00000309395.7	6930	6	-22	0	0	0	multi-exon	FALSE	canonical	3	64	junction_5	10.6282642044691	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGACTTTGCATTACTGT	-6	True	NA	6	True	AATAAA	-21	NA	70902346	70988168	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_70902551_70958873_70959041_70969930_70970025_70975152_70975287_70979127_70979292_70981979
H1_mix_00066616	chr4	+	2373	8	FSM	ENSG00000163738.19	ENST00000395759.6	2354	8	-19	0	-15	0	multi-exon	FALSE	canonical	3	15	junction_7	10.1337987719818	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAAGCTGTATTCTTTT	NA	False	NA	NA	False	AATAAA	-10	NA	74158092	74303092	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_74158282_74174505_74174691_74175280_74175404_74199793_74199947_74201262_74201371_74225301_74225395_74281424_74281551_74301696
H1_mix_00066617	chr4	+	2376	2	FSM	ENSG00000163738.19	ENST00000461101.1	2363	2	-13	0	-3	0	multi-exon	FALSE	canonical	3	166	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAACCATCTTGCTGCTTT	-32	True	NA	27	True	ATTAAA	-19	NA	74158104	74162253	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_74158282_74160054
H1_mix_00066621	chr4	+	2447	4	FSM	ENSG00000174796.12	ENST00000503831.1	655	4	-48	-1744	3	1212	multi-exon	FALSE	canonical	3	42	junction_3	13.4742552876052	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGTCTCAAAAAAAAAAAAAA	-5	True	NA	NA	False	NA	NA	NA	75514440	75523794	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_75514521_75515432_75515533_75516771_75516980_75521735
H1_mix_00066628	chr4	+	10098	10	NIC	ENSG00000138771.16	novel	3766	4	NA	NA	-222	0	combination_of_known_junctions	FALSE	canonical	3	75	junction_2	23.9464422987097	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGTCATATTTATTCTA	-3	True	NA	18	True	AATAAA	-21	NA	76689348	76783253	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_76689703_76710155_76710288_76730803_76730936_76738760_76741927_76749016_76749091_76754310_76755193_76756448_76756938_76759544_76759696_76770625_76770899_76778808
H1_mix_00066635	chr4	+	16682	74	FSM	ENSG00000138759.20	ENST00000512123.4	15871	74	-811	0	-811	0	multi-exon	TRUE	canonical	3	30	junction_26	46.0456910807572	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGTTTTCCTATGTT	NA	False	NA	25	True	AATAAA	-19	NA	78056511	78544269	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_78058086_78065984_78066017_78237509_78237618_78245232_78245326_78252391_78252552_78255241_78255376_78265024_78265109_78266833_78266936_78267240_78267433_78278654_78278745_78281397_78281434_78282819_78282968_78284404_78284549_78286404_78286540_78308065_78308210_78315593_78315735_78317367_78317509_78318809_78318987_78333271_78333413_78337673_78337818_78363512_78363666_78363907_78364055_78369837_78369985_78372717_78372859_78374110_78374252_78375738_78375880_78379725_78379997_78384058_78384144_78387374_78387702_78400733_78400888_78407662_78407842_78412968_78413086_78418948_78419064_78421862_78422001_78424387_78424421_78429094_78429227_78430291_78430418_78432356_78432605_78438569_78438719_78438901_78439065_78441161_78441298_78445521_78445713_78446726_78446881_78448052_78448317_78450150_78450340_78451771_78451892_78452174_78452355_78464020_78464146_78464442_78464584_78466207_78466436_78469977_78470092_78472179_78472331_78473437_78473598_78475437_78475607_78477814_78478062_78479373_78479719_78481803_78481965_78482387_78482536_78488874_78489081_78496804_78496962_78499720_78499922_78507420_78507609_78508730_78509007_78511273_78511507_78513391_78513553_78515798_78516014_78519330_78519482_78521522_78521631_78522648_78522809_78526540_78526658_78534448_78534616_78536994_78537201_78539293_78539441_78540530
H1_mix_00066636	chr4	+	7266	45	FSM	ENSG00000138759.20	ENST00000684159.1	7266	45	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_26	14.6047619031579	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCATTTGTTCTCTTCCT	-16	True	NA	NA	False	AATAAA	-24	NA	78057322	78450455	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_78058086_78065984_78066017_78237509_78237618_78245232_78245326_78252391_78252552_78255241_78255376_78265024_78265109_78266833_78266936_78267240_78267433_78278654_78278745_78281397_78281434_78282819_78282968_78284404_78284549_78286404_78286540_78308065_78308210_78315593_78315735_78317367_78317509_78318809_78318987_78333271_78333413_78337673_78337818_78363512_78363666_78363907_78364055_78369837_78369985_78372717_78372859_78374110_78374252_78375738_78375880_78379725_78379997_78384058_78384144_78387374_78387702_78400733_78400888_78407662_78407842_78412968_78413086_78418948_78419064_78421862_78422001_78424387_78424421_78429094_78429227_78430291_78430418_78432356_78432605_78438569_78438719_78438901_78439065_78441161_78441298_78445521_78445713_78446726_78446881_78448052_78448317_78450150
H1_mix_00066637	chr4	+	11473	64	FSM	ENSG00000138759.20	ENST00000682513.1	11473	64	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_26	29.8921046243193	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAAAATGAGTTCCTTTG	-16	True	NA	NA	False	CATAAA	-3	NA	78057322	78512279	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_78058086_78065984_78066017_78237509_78237618_78245232_78245326_78252391_78252552_78255241_78255376_78265024_78265109_78266833_78266936_78267240_78267433_78278654_78278745_78281397_78281434_78282819_78282968_78284404_78284549_78286404_78286540_78308065_78308210_78315593_78315735_78317367_78317509_78318809_78318987_78333271_78333413_78337673_78337818_78363512_78363666_78363907_78364055_78369837_78369985_78372717_78372859_78374110_78374252_78375738_78375880_78379725_78379997_78384058_78384144_78387374_78387702_78400733_78400888_78407662_78407842_78412968_78413086_78418948_78419064_78421862_78422001_78424387_78424421_78429094_78429227_78430291_78430418_78432356_78432605_78438569_78438719_78438901_78439065_78441161_78441298_78445521_78445713_78446726_78446881_78448052_78448317_78450150_78450340_78451771_78451892_78452174_78452355_78464020_78464146_78464442_78464584_78466207_78466436_78469977_78470092_78472179_78472331_78473437_78473598_78475437_78475607_78477814_78478062_78479373_78479719_78481803_78481965_78482387_78482536_78488874_78489081_78496804_78496962_78499720_78499922_78507420_78507609_78508730_78509007_78511273
H1_mix_00066638	chr4	+	3882	19	NNC	ENSG00000138759.20	novel	2871	19	NA	NA	4	-6778	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_18	16.1077582718145	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGATCAAATATTTATTA	169	False	NA	NA	False	AATAAA	-22	NA	78057573	78331259	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_78058086_78065984_78066017_78237509_78237618_78245232_78245326_78252391_78252552_78255241_78255376_78265024_78265109_78266833_78266936_78267240_78267433_78278654_78278745_78281397_78281434_78282819_78282968_78284404_78284549_78286404_78286540_78308065_78308210_78315593_78315735_78317367_78317509_78318809_78318987_78329950
H1_mix_00066639	chr4	+	3909	21	NNC	ENSG00000138759.20	novel	7217	42	NA	NA	-365	17163	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_20	14.3687160177937	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTAATGTGTTTATTAA	NA	False	NA	33	True	AATAAA	-43	NA	78056957	78355200	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_78058086_78065984_78066017_78237509_78237618_78245232_78245326_78252391_78252552_78255241_78255376_78265024_78265109_78266833_78266936_78267240_78267433_78278654_78278745_78281397_78281434_78282819_78282968_78284404_78284549_78286404_78286540_78308065_78308210_78315593_78315735_78317367_78317509_78318809_78318987_78333271_78333413_78337673_78337818_78354765
H1_mix_00066640	chr4	+	9868	31	NIC	ENSG00000138759.20	novel	15871	74	NA	NA	26921	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_7	47.9608173408252	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGTTTTCCTATGTT	NA	False	NA	25	True	AATAAA	-19	NA	78445958	78544269	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_78446881_78448052_78448317_78450150_78450340_78451771_78451892_78452174_78452355_78464020_78464146_78464442_78464584_78469977_78470092_78472179_78472331_78473437_78473598_78475437_78475607_78477814_78478062_78479373_78479719_78481803_78481965_78482387_78482536_78488874_78489081_78496804_78496962_78499720_78499922_78507420_78507609_78508730_78509007_78511273_78511507_78513391_78513553_78515798_78516014_78519330_78519482_78521522_78521631_78522648_78522809_78526540_78526658_78534448_78534616_78536994_78537201_78539293_78539441_78540530
H1_mix_00066642	chr4	+	1977	4	FSM	ENSG00000138772.13	ENST00000505805.1	832	4	-1057	-88	-1057	0	multi-exon	FALSE	canonical	3	249	junction_3	30.0111090542597	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTGTTTGCTTTCAGA	627	False	NA	30	True	AATAAA	-25	NA	78596015	78610451	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_78597415_78601509_78601569_78604276_78604400_78610055
H1_mix_00066644	chr4	+	3080	14	FSM	ENSG00000138756.19	ENST00000502871.5	3195	14	0	115	0	-115	multi-exon	TRUE	canonical	0	0	junction_13	29.9782958963993	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAAATTTGTATTTTATA	15	True	NA	NA	False	NA	NA	NA	78776377	78879854	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_78776722_78826036_78826156_78833581_78833688_78842384_78842528_78844927_78845050_78847187_78847270_78850923_78851057_78859583_78859688_78861388_78861469_78865556_78865721_78870782_78871061_78871849_78871949_78872613_78872799_78878733
H1_mix_00066652	chr4	+	3825	5	FSM	ENSG00000168152.13	ENST00000302236.10	3825	5	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	21.4767315949145	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGATGTTTGTTTATT	22	True	NA	11	True	ATTAAA	-18	NA	82900734	82919969	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_82900883_82904735_82904932_82906323_82906628_82907784_82907936_82916943
H1_mix_00066653	chr4	+	4419	6	NNC	ENSG00000168152.13	novel	565	4	NA	NA	2288	319	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	58.5047006658439	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTGCATTATTCTTTC	779	False	NA	8	True	AATACA	-16	NA	82903056	82920288	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_82903365_82904735_82904932_82906323_82906628_82907784_82907936_82910696_82910812_82916943
H1_mix_00066654	chr4	+	565	4	FSM	ENSG00000168152.13	ENST00000506208.1	565	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	55.6796392070048	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTCATTGTTAATAAAAAG	4148	False	NA	NA	False	NA	NA	NA	82906425	82917040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_82906628_82907784_82907936_82910696_82910812_82916943
H1_mix_00066656	chr4	+	1663	10	FSM	ENSG00000138663.9	ENST00000264389.7	1651	10	-12	0	0	0	multi-exon	FALSE	canonical	3	444	junction_9	62.7764994953437	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAAGAGTATTTTGTTCCC	-21	True	NA	36	True	AATAAA	-44	NA	83035170	83075818	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_83035299_83045625_83045706_83049165_83049318_83049880_83049985_83056925_83057080_83057257_83057409_83063075_83063247_83066437_83066554_83068437_83068523_83075296
H1_mix_00066657	chr4	+	1713	11	FSM	ENSG00000138663.9	ENST00000511653.1	1695	11	-18	0	0	0	multi-exon	FALSE	canonical	2	8	junction_10	224.784897179504	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGGTTATTCTAATAAAT	15	True	NA	-26	True	NA	NA	NA	83035206	83075756	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_83035299_83045625_83045706_83049165_83049318_83049880_83049985_83056925_83057080_83057257_83057409_83063075_83063247_83066437_83066554_83068437_83068523_83073205_83073354_83075296
H1_mix_00066662	chr4	+	490	5	FSM	ENSG00000163319.11	ENST00000505719.1	490	5	0	0	0	0	multi-exon	TRUE	canonical	3	87	junction_3	764.934147492449	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATGTCCATTAAGCAGAT	28	False	NA	-63	True	NA	NA	NA	83456089	83461328	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_83456178_83456908_83456959_83458345_83458430_83460972_83461033_83461120
H1_mix_00066666	chr4	+	3314	4	FSM	ENSG00000180769.10	ENST00000652490.2	3314	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	2.16024689946929	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTTCTCTACTGTTTTC	14	True	NA	-2	True	AATAAA	-8	NA	84966792	85008735	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_84967128_84969724_84969877_85004229_85004328_85006006
H1_mix_00066671	chr4	+	8487	47	FSM	ENSG00000163629.13	ENST00000427191.6	8487	47	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_19	63.5780038290639	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTGTGTGCAGACAAAT	-3	True	NA	19	True	AATAAA	-27	NA	86594314	86815157	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_86594790_86635251_86635372_86672364_86672544_86686709_86686776_86689004_86689191_86693586_86693675_86701240_86701802_86716529_86716626_86717023_86717118_86722211_86722435_86732399_86732475_86732591_86732767_86734302_86734457_86734736_86734876_86735593_86735747_86741633_86741817_86744965_86745129_86750469_86750888_86751026_86751125_86758259_86758350_86758677_86758786_86758941_86759074_86762726_86763191_86764592_86764725_86765394_86765489_86766431_86766518_86767816_86767977_86769768_86769984_86770100_86770200_86771170_86771536_86772777_86772959_86774372_86774532_86775170_86775343_86775441_86775653_86780401_86780473_86782200_86782263_86784464_86784559_86785230_86785369_86785847_86785937_86796873_86796930_86799100_86799205_86803708_86803858_86805278_86805370_86807559_86807898_86809768_86809985_86811045_86811109_86814455
H1_mix_00066672	chr4	+	8555	48	FSM	ENSG00000163629.13	ENST00000411767.7	8548	48	-7	0	-7	0	multi-exon	TRUE	canonical	3	90	junction_20	67.6750417219584	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTGTGCAGACAAATTAGA	-10	True	NA	23	True	AATAAA	-31	NA	86594307	86815161	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_86594790_86635251_86635372_86672364_86672544_86686709_86686776_86689004_86689191_86693586_86693675_86701240_86701802_86716529_86716626_86717023_86717118_86722211_86722435_86732399_86732475_86732591_86732767_86734302_86734457_86734736_86734876_86735593_86735747_86741633_86741817_86744965_86745129_86750469_86750888_86751026_86751125_86753008_86753066_86758259_86758350_86758677_86758786_86758941_86759074_86762726_86763191_86764592_86764725_86765394_86765489_86766431_86766518_86767816_86767977_86769768_86769984_86770100_86770200_86771170_86771536_86772777_86772959_86774372_86774532_86775170_86775343_86775441_86775653_86780401_86780473_86782200_86782263_86784464_86784559_86785230_86785369_86785847_86785937_86796873_86796930_86799100_86799205_86803708_86803858_86805278_86805370_86807559_86807898_86809768_86809985_86811045_86811109_86814455
H1_mix_00066674	chr4	+	7492	46	NIC	ENSG00000163629.13	novel	8573	48	NA	NA	31	-1	combination_of_known_splicesites	FALSE	canonical	3	27	junction_23	75.5529607397567	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAACTGTGTGCAGACAAA	414	False	NA	18	True	AATAAA	-26	NA	86594762	86815156	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_86594790_86635251_86635372_86672364_86672544_86686709_86686776_86689004_86689191_86693586_86693675_86716529_86716626_86717023_86717118_86722211_86722435_86732399_86732475_86732591_86732767_86734302_86734457_86734736_86734876_86735593_86735747_86741633_86741817_86744965_86745129_86750469_86750888_86751026_86751125_86758259_86758350_86758677_86758786_86758941_86759074_86762726_86763191_86764592_86764740_86765394_86765489_86766431_86766518_86767816_86767977_86769768_86769984_86770100_86770200_86771170_86771536_86772777_86772959_86774372_86774532_86775170_86775343_86775441_86775653_86780401_86780473_86782200_86782263_86784464_86784559_86785230_86785369_86785847_86785937_86796873_86796930_86799100_86799205_86803708_86803858_86805278_86805370_86807559_86807898_86809768_86809985_86811045_86811109_86814455
H1_mix_00066680	chr4	+	9625	20	FSM	ENSG00000172493.23	ENST00000544085.6	9625	20	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	27.3102620916106	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTGGGGTTGAATCCAT	4	True	NA	7	True	AATAAA	-12	NA	87006752	87141035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_87007425_87046165_87046287_87046694_87047595_87084119_87084165_87089983_87090071_87091792_87091830_87094914_87094970_87105627_87105683_87105807_87105846_87108158_87108316_87114366_87115300_87125036_87125144_87126098_87126337_87127025_87127118_87127642_87127704_87131082_87131220_87131792_87131865_87132270_87132409_87134470_87134695_87135579
H1_mix_00066682	chr4	+	6072	2	ISM	ENSG00000172493.23	ENST00000307808.10	9390	20	127095	-1	19140	0	3prime_fragment	FALSE	canonical	3	138	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGGTTGAATCCATGCTT	7801	False	NA	11	True	AATAAA	-16	NA	87134082	87141039	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_87134695_87135579
H1_mix_00066684	chr4	+	2502	8	FSM	ENSG00000170502.13	ENST00000473942.5	2458	8	-43	-1	-19	0	multi-exon	FALSE	canonical	3	30	junction_1	111.96355092035	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATGTGTGAATTTTAAAC	NA	False	NA	10	True	AATAAA	-18	NA	87422553	87459455	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_87422676_87434980_87435221_87438276_87438373_87441828_87441916_87449141_87449254_87451588_87451736_87454370_87454456_87457842
H1_mix_00066688	chr4	+	5439	3	Intergenic	novelGene_1053	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	670	junction_2	199	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTTTCATTTCATTCTTG	NA	False	NA	17	True	AATAAA	-23	NA	87922149	87934278	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_87924395_87926696_87926987_87931374
H1_mix_00066689	chr4	+	3559	4	Intergenic	novelGene_1055	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	195	junction_2	214.501489246319	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTCATTCTTGAGTGG	NA	False	NA	22	True	AATAAA	-28	NA	87922149	87934283	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_87922401_87924258_87924395_87926723_87926987_87931374
H1_mix_00066690	chr4	+	928	2	Intergenic	novelGene_1056	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	619	junction_1	0	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGACCTGGTGTCTGCC	NA	False	NA	27	True	AATAAA	-28	NA	87922157	87927381	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_87922401_87926696
H1_mix_00066691	chr4	+	3413	3	Intergenic	novelGene_1060	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	451	junction_2	193	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCATTTCATTCTTGAGT	NA	False	NA	20	True	AATAAA	-26	NA	87922159	87934281	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_87922401_87924129_87924395_87931374
H1_mix_00066692	chr4	+	3160	2	Intergenic	novelGene_1051	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	1377	junction_1	0	229	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTCATTCTTGAGTG	NA	False	NA	21	True	AATAAA	-27	NA	87922148	87934282	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_87922401_87931374
H1_mix_00066693	chr4	+	1193	3	Intergenic	novelGene_1059	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	837	junction_1	115.5	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGACCTGGTGTCTGCCTC	NA	False	NA	29	True	AATAAA	-30	NA	87922159	87927383	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_87922401_87924129_87924395_87926696
H1_mix_00066694	chr4	+	3450	3	Intergenic	novelGene_1052	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	619	junction_1	25.5	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTCATTCTTGAGTG	NA	False	NA	21	True	AATAAA	-27	NA	87922148	87934282	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_87922401_87926696_87926987_87931374
H1_mix_00066695	chr4	+	1012	3	Intergenic	novelGene_1057	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	270	junction_1	399	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGACCTGGTGTCTGCCTC	NA	False	NA	29	True	AATAAA	-30	NA	87922158	87927383	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_87922401_87924311_87924395_87926696
H1_mix_00066696	chr4	+	3869	3	Intergenic	novelGene_1050	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	238	junction_1	415	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTATAGTAGAATGATTT	NA	False	NA	7	True	AATAAA	-17	NA	87922148	87930177	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_87922401_87924258_87924395_87926696
H1_mix_00066697	chr4	+	1777	3	Intergenic	novelGene_1061	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	161	junction_1	453.5	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGACCTGGTGTCTGCCT	NA	False	NA	28	True	AATAAA	-29	NA	87922160	87927382	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_87922401_87923543_87924395_87926696
H1_mix_00066698	chr4	+	3517	4	Intergenic	novelGene_1066	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	270	junction_1	325.782476849542	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTTTCATTTCATTCTTG	NA	False	NA	17	True	AATAAA	-23	NA	87922160	87934278	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_87922401_87924311_87924395_87926696_87926987_87931374
H1_mix_00066699	chr4	+	3710	4	Intergenic	novelGene_1054	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	670	junction_3	163.1815621393	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTTTCATTTCATTCTTG	NA	False	NA	17	True	AATAAA	-23	NA	87922149	87934278	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_87922401_87924129_87924395_87926696_87926987_87931374
H1_mix_00066700	chr4	+	3566	4	Intergenic	novelGene_1069	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	238	junction_1	338.940833905991	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAACTTTCATTTCATTC	NA	False	NA	14	True	AATAAA	-20	NA	87922161	87934275	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_87922401_87924258_87924395_87926696_87926987_87931374
H1_mix_00066701	chr4	+	3994	3	Intergenic	novelGene_1065	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	161	junction_1	145	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACTTTCATTTCATTCTT	NA	False	NA	16	True	AATAAA	-22	NA	87922160	87934277	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_87922401_87923543_87924395_87931374
H1_mix_00066702	chr4	+	3227	3	Intergenic	novelGene_1067	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	270	junction_1	90.5	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTTTCATTTCATTCTTG	NA	False	NA	17	True	AATAAA	-23	NA	87922160	87934278	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_87922401_87924311_87924395_87931374
H1_mix_00066703	chr4	+	3427	3	Intergenic	novelGene_1048	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	114	junction_1	278	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTTTCATTTCATTCTTG	NA	False	NA	17	True	AATAAA	-23	NA	87922140	87934278	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_87922401_87926723_87926987_87931374
H1_mix_00066704	chr4	+	2135	2	Intergenic	novelGene_1075	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTCTCTTCTTATCTCA	9181	False	NA	25	True	AATAAA	-22	NA	87941067	87943509	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_87941577_87941883
H1_mix_00066705	chr4	+	2531	1	Intergenic	novelGene_1074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTCTTTCTCTTCTTATC	9089	False	NA	22	True	AATAAA	-19	NA	87940975	87943506	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_87941000_87943500
H1_mix_00066707	chr4	+	1577	7	FSM	ENSG00000118785.15	ENST00000395080.8	1561	7	-16	0	4	0	multi-exon	FALSE	canonical	3	73	junction_4	32.401988965014	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATGTTTTTAAAGGTTT	NA	False	NA	12	True	AATAAA	-23	NA	87975697	87983411	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_87975801_87976881_87976950_87977058_87977098_87980045_87980127_87980392_87980435_87981474_87981799_87982491
H1_mix_00066710	chr4	+	1720	10	FSM	ENSG00000118762.8	ENST00000508588.5	1720	10	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	71.9286340414006	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTCAAAGATTTTTTTTT	NA	False	NA	NA	False	TATAAA	-10	NA	88043260	88075858	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_88043458_88051990_88052159_88056085_88056268_88057982_88058104_88061905_88062005_88065373_88065496_88065761_88065880_88067897_88068062_88074811_88074960_88075457
H1_mix_00066711	chr4	+	5432	9	ISM	ENSG00000118762.8	ENST00000508588.5	1720	10	6740	-1919	-2069	0	3prime_fragment	FALSE	canonical	3	190	junction_3	19.3709673222583	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGAGAGTTGTCTGTTT	NA	False	NA	16	True	AATAAA	-18	NA	88050000	88077777	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_88052159_88056085_88056268_88057982_88058104_88061905_88062005_88065373_88065496_88065761_88065880_88067897_88068062_88074811_88074960_88075457
H1_mix_00066714	chr4	+	3776	23	FSM	ENSG00000138642.16	ENST00000264346.12	3776	23	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_10	6.62576987574131	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGCATGTCGCTCAATT	1	True	NA	13	True	AATAAA	-20	NA	88378851	88443097	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_88379121_88383220_88383381_88385498_88385576_88390651_88390880_88393487_88393583_88396014_88396143_88396850_88396988_88398141_88398210_88404875_88404998_88405553_88405614_88408523_88408618_88413076_88413267_88417424_88417580_88423859_88423974_88424594_88424703_88428579_88428751_88431161_88431306_88435724_88435892_88436904_88436972_88437710_88437782_88439873_88440058_88440147_88440251_88442233
H1_mix_00066724	chr4	+	659	2	Intergenic	novelGene_1080	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTGTTTGGTGGTCTCT	NA	False	NA	NA	False	AATAAA	-20	NA	91623999	91629661	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_91624238_91629240
H1_mix_00066728	chr4	+	11099	4	NNC	ENSG00000152208.13	novel	5783	16	NA	NA	134335	-512646	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	121.864223170252	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACTTCAAAACAGATTTAC	NA	False	NA	NA	False	AAAACA	-36	NA	92438991	92599601	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_92439605_92440354_92442311_92590130_92590287_92591227
H1_mix_00066731	chr4	+	1232	2	ISM	ENSG00000152208.13	ENST00000611049.4	4844	14	684252	1459	8	596	3prime_fragment	FALSE	canonical	3	190	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTCTTGCACTGCAACAG	NA	False	NA	NA	False	AAAAAG	-34	NA	93769237	93773094	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_93769451_93772075
H1_mix_00066733	chr4	+	5017	24	FSM	ENSG00000163104.18	ENST00000359052.8	5017	24	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_18	57.6282329463101	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGTATTTTCACACCCT	-10	True	NA	15	True	AATAAA	-16	NA	94207610	94291290	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_94207736_94208345_94208585_94226118_94226297_94233953_94234123_94236951_94237019_94240905_94241007_94249653_94249756_94250751_94250834_94252615_94253008_94264706_94264907_94270727_94270819_94273616_94273717_94274737_94274798_94274889_94274966_94276338_94276475_94277021_94277160_94278421_94278518_94278615_94278734_94278922_94279051_94280591_94280781_94281471_94281591_94283120_94283304_94284959_94285070_94289472
H1_mix_00066734	chr4	+	4986	24	NIC	ENSG00000163104.18	novel	5017	24	NA	NA	24	-1	combination_of_known_junctions	FALSE	canonical	3	125	junction_1	53.1532719722978	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTGTATTTTCACACCC	14	True	NA	14	True	AATAAA	-15	NA	94207634	94291289	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_94207736_94208345_94208585_94226118_94226297_94233953_94234123_94236951_94237019_94240905_94241007_94249653_94249756_94250751_94250834_94252615_94253008_94264706_94264907_94270727_94270819_94273616_94273717_94274737_94274798_94274889_94274966_94276338_94276475_94277021_94277160_94278421_94278518_94278615_94278734_94278928_94279051_94280591_94280781_94281471_94281591_94283120_94283304_94284959_94285070_94289472
H1_mix_00066735	chr4	+	4649	24	FSM	ENSG00000163104.18	ENST00000457823.6	4649	24	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_18	55.8308273756017	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGTTAATTTTTGGAAA	142	False	NA	101	True	AATAAA	-18	NA	94207844	94290821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_94208071_94208345_94208585_94226118_94226297_94233953_94234123_94236951_94237019_94240905_94241007_94249653_94249756_94250751_94250834_94252615_94253008_94264706_94264907_94270727_94270819_94273616_94273717_94274737_94274798_94274889_94274966_94276338_94276475_94277021_94277160_94278421_94278518_94278615_94278734_94278922_94279051_94280591_94280781_94281471_94281591_94283120_94283304_94284959_94285070_94289472
H1_mix_00066736	chr4	+	5114	24	FSM	ENSG00000163104.18	ENST00000354268.9	5094	24	-20	0	0	0	multi-exon	FALSE	canonical	3	138	junction_18	51.1679838462341	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTATTTTCACACCCTTT	142	False	NA	17	True	AATAAA	-18	NA	94207844	94291292	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_94208071_94208345_94208585_94226118_94226297_94233953_94234123_94236951_94237019_94240905_94241007_94249653_94249756_94250751_94250834_94252615_94253008_94264706_94264907_94270727_94270819_94273616_94273717_94274737_94274798_94274889_94274966_94276338_94276475_94277021_94277160_94278421_94278518_94278615_94278734_94278928_94279051_94280591_94280781_94281471_94281591_94283120_94283304_94284959_94285070_94289472
H1_mix_00066742	chr4	+	6065	13	FSM	ENSG00000163110.15	ENST00000317968.9	6043	13	-22	0	0	0	multi-exon	FALSE	canonical	3	172	junction_8	31.2786535302699	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCTCTCCTTTTTGTTGT	191	False	NA	23	True	AATAAA	-23	NA	94451919	94668223	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_94451996_94455246_94455385_94523723_94523876_94573350_94573394_94575615_94576035_94585564_94585738_94586407_94586445_94618003_94618192_94640275_94640451_94654459_94654641_94657426_94657548_94662421_94662538_94663977
H1_mix_00066743	chr4	+	534	4	NIC	ENSG00000163110.15	novel	743	4	NA	NA	3	-14	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	123.307204439427	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCATATTTGTATAATGAT	-11	True	NA	14	True	AATAAA	-16	NA	94451930	94549972	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_94451996_94455246_94455385_94523723_94523876_94549793
H1_mix_00066744	chr4	+	3012	1	ISM	ENSG00000138696.11	ENST00000515059.6	5580	13	397476	6	51076	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACATGACTGTTATGT	NA	False	NA	NA	False	AATAAA	-23	NA	95155430	95158442	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_95155400_95158400
H1_mix_00066746	chr4	+	2423	14	NIC	ENSG00000138698.15	novel	3747	15	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_6	49.6683676555021	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGGTTTCTCCTTTTTC	-10	True	NA	23	True	AATAAA	-24	NA	98261389	98442666	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_98261570_98293407_98293516_98343138_98343262_98352475_98352602_98379016_98379164_98391951_98392081_98416744_98416889_98417366_98417499_98418656_98418792_98420018_98420145_98421254_98421395_98433935_98434063_98436939_98437069_98441989
H1_mix_00066747	chr4	+	951	6	FSM	ENSG00000138698.15	ENST00000505378.5	934	6	-17	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	24.0881713710277	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTATGATTGCATTGTTT	17	True	NA	-3	True	AGTAAA	-10	NA	98261416	98392245	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_98261570_98293407_98293516_98343138_98343262_98352475_98352602_98379016_98379164_98391951
H1_mix_00066753	chr4	+	4318	24	FSM	ENSG00000109320.13	ENST00000394820.8	3693	24	-238	-387	-238	0	multi-exon	FALSE	canonical	3	21	junction_3	6.88797752642507	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTTTGATCTGTGCAAA	13	False	NA	16	True	AATAAA	-25	NA	102501092	102617302	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_102501789_102525511_102525558_102529835_102529915_102533847_102533886_102537857_102537957_102566986_102567136_102576875_102577040_102578880_102579040_102580534_102580640_102582865_102582958_102584681_102584821_102593424_102593569_102594891_102594982_102596137_102596333_102597519_102597662_102600894_102601010_102606495_102606698_102607149_102607320_102607648_102607752_102610574_102610700_102612043_102612111_102612433_102612607_102613424_102613582_102616433
H1_mix_00066754	chr4	+	4231	24	FSM	ENSG00000109320.13	ENST00000226574.9	4055	24	-177	1	-149	-1	multi-exon	FALSE	canonical	3	25	junction_3	6.42449235966509	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGTTTGATCTGTGCAA	102	False	NA	15	True	AATAAA	-24	NA	102501181	102617301	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_102501789_102525511_102525558_102529835_102529915_102533844_102533886_102537857_102537957_102566986_102567136_102576875_102577040_102578880_102579040_102580534_102580640_102582865_102582958_102584681_102584821_102593424_102593569_102594891_102594982_102596137_102596333_102597519_102597662_102600894_102601010_102606495_102606698_102607149_102607320_102607648_102607752_102610574_102610700_102612043_102612111_102612433_102612607_102613424_102613582_102616433
H1_mix_00066756	chr4	+	5870	3	FSM	ENSG00000145354.12	ENST00000273986.10	5878	3	0	8	0	-8	multi-exon	FALSE	canonical	3	1084	junction_2	47.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTAAATTTTCAGATTTC	-5	True	NA	NA	False	AATAAA	-11	NA	102868991	102892799	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_102869188_102885215_102885431_102887340
H1_mix_00066763	chr4	+	5487	7	FSM	ENSG00000164022.18	ENST00000671960.1	5487	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	215.871425210059	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCTAAACACAAAATGAATT	1701	False	NA	-69	True	NA	NA	NA	106318378	106349142	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_106321452_106324984_106325119_106327450_106327565_106328075_106328244_106331671_106331884_106336868_106337038_106347525
H1_mix_00066766	chr4	+	1803	8	FSM	ENSG00000138796.18	ENST00000309522.8	1803	8	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_4	21.3331207472401	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTATTTCTCCTCTTCTTTG	-6	True	NA	24	True	AGTAAA	-21	NA	107989888	108035171	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_107990065_108009758_108009888_108014430_108014589_108019539_108019667_108023473_108023564_108027687_108027761_108033175_108033293_108034238
H1_mix_00066768	chr4	+	6611	2	FSM	ENSG00000138796.18	ENST00000514776.3	6677	2	0	66	0	1	multi-exon	FALSE	canonical	3	357	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCCTCTTCTTTGACCT	NA	False	NA	28	True	AGTAAA	-25	NA	108027618	108035175	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_108033293_108034238
H1_mix_00066769	chr4	+	544	5	FSM	ENSG00000109475.17	ENST00000394665.5	529	5	-14	-1	0	1	multi-exon	FALSE	canonical	3	2142	junction_1	9300.97281202348	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGACTTTTTTTTTTTC	1	True	NA	17	True	AATAAA	-44	NA	108620575	108625256	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_108620713_108621950_108622025_108622104_108622205_108622514_108622619_108625127
H1_mix_00066770	chr4	+	546	5	FSM	ENSG00000109475.17	ENST00000394667.8	546	5	0	0	0	0	multi-exon	FALSE	canonical	3	12362	junction_1	5106.08707818423	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTTTGGTTTGG	1	True	NA	131	True	NA	NA	NA	108620575	108625370	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_108620601_108621950_108622025_108622104_108622205_108622514_108622619_108625127
H1_mix_00066771	chr4	+	818	6	NIC	ENSG00000109475.17	novel	560	6	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	511	junction_5	9158.20503373887	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTCTCTATGTGACCA	4	True	NA	30	True	TATAAA	-25	NA	108620578	108630412	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_108620601_108621950_108622025_108622104_108622205_108622514_108622619_108625127_108625254_108630020
H1_mix_00066772	chr4	+	419	4	ISM	ENSG00000109475.17	ENST00000506397.5	549	6	1305	-3	-105	0	3prime_fragment	FALSE	canonical	3	19491	junction_3	2521.40573666534	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATGACTTTTTTTTTTT	1307	False	NA	16	True	AATAAA	-43	NA	108621937	108625255	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_108622025_108622104_108622205_108622514_108622619_108625127
H1_mix_00066774	chr4	+	947	3	FSM	ENSG00000198856.13	ENST00000613215.4	876	3	2	-73	2	71	multi-exon	FALSE	canonical	3	64	junction_2	1447	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGACTTTCTTTAGCTAC	NA	False	NA	100	True	NA	NA	NA	108650586	108667891	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_108650795_108655563_108655658_108667246
H1_mix_00066777	chr4	+	4947	24	FSM	ENSG00000138802.11	ENST00000265175.5	5083	24	-2	138	0	-138	multi-exon	FALSE	canonical	3	42	junction_3	29.8473748342975	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATCCCAGCTACTCAGG	-27	True	NA	NA	False	NA	NA	NA	109433812	109540758	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_109434003_109462900_109463645_109473003_109473187_109481676_109481782_109491326_109491408_109494614_109494857_109506327_109506513_109510008_109510112_109511956_109512084_109513746_109513857_109516527_109516641_109520365_109520485_109521116_109521173_109521419_109521627_109524817_109524942_109525345_109525505_109526225_109526400_109527321_109527433_109530288_109530465_109531384_109531523_109532638_109532744_109533592_109533686_109538492_109538597_109539560
H1_mix_00066778	chr4	+	4567	23	NIC	ENSG00000138802.11	novel	4066	25	NA	NA	13	-438	combination_of_known_junctions	FALSE	canonical	3	51	junction_5	25.7494684210556	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTTGGTGATTTTTTGG	NA	False	NA	13	True	ATTAAA	-19	NA	109433784	109540458	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_109434003_109462900_109463645_109473003_109473187_109491326_109491408_109494614_109494857_109506330_109506513_109510008_109510112_109511956_109512084_109513746_109513857_109516527_109516641_109520365_109520485_109521116_109521173_109521419_109521627_109524817_109524942_109525345_109525505_109526225_109526400_109527321_109527433_109530288_109530465_109531384_109531523_109532638_109532744_109533592_109533686_109538492_109538597_109539560
H1_mix_00066780	chr4	+	741	5	FSM	ENSG00000005059.16	ENST00000472310.5	1193	5	0	452	0	-452	multi-exon	FALSE	canonical	3	214	junction_3	7.62807315119618	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGGAAGCATCACGGTTG	6	True	NA	NA	False	NA	NA	NA	109560208	109682742	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_109560437_109659010_109659087_109660194_109660366_109664289_109664395_109682581
H1_mix_00066781	chr4	+	2230	8	FSM	ENSG00000005059.16	ENST00000394650.7	2230	8	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_3	35.7850727059682	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAATACAAGTTAAATCAG	-15	True	NA	-59	True	AATAAA	-18	NA	109560245	109688719	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_109560437_109659010_109659087_109660194_109660366_109664289_109664395_109682581_109682743_109684442_109684647_109685250_109685368_109687514
H1_mix_00066782	chr4	+	1290	9	NNC	ENSG00000005059.16	novel	2230	8	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	103.974756551771	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTGTTTGAAGTTCTCAA	-3	True	NA	17	True	ATTAAA	-17	NA	109560257	109687716	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_109560437_109659010_109659087_109660194_109660366_109663800_109663876_109664289_109664395_109682581_109682743_109684442_109684647_109685250_109685368_109687514
H1_mix_00066784	chr4	+	1015	7	FSM	ENSG00000109534.17	ENST00000226796.7	1015	7	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_1	64.5327221045434	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTTAGAGTGTGTTTAT	-1	True	NA	18	True	AATAAA	-18	NA	109815761	109824737	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_109815805_109816152_109816379_109817935_109818091_109819000_109819061_109822346_109822489_109823964_109824034_109824417
H1_mix_00066785	chr4	+	1146	4	FSM	ENSG00000109534.17	ENST00000503671.2	1146	4	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_1	173.253186598881	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTCAGAGTTATCTTGG	13	False	NA	NA	False	NA	NA	NA	109815827	109819587	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_109816006_109816152_109816379_109817935_109818091_109819000
H1_mix_00066790	chr4	+	5519	10	FSM	ENSG00000138660.12	ENST00000274000.10	5915	10	0	396	0	-396	multi-exon	FALSE	canonical	3	372	junction_7	8.96632933414756	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGTCTCTTGGCTGAAT	-1	True	NA	NA	False	AATAAA	-24	NA	112231786	112272714	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_112232175_112253207_112253257_112254746_112254774_112257771_112257798_112260765_112260863_112262987_112263087_112265008_112265068_112265733_112265808_112266587_112266717_112268143
H1_mix_00066794	chr4	+	2175	13	FSM	ENSG00000174720.17	ENST00000324052.10	2164	13	-14	3	-14	3	multi-exon	FALSE	canonical	3	39	junction_1	164.019540671904	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAATGTGTTGATTTTGTT	283	False	NA	12	True	AATAAA	-20	NA	112637441	112657589	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_112637604_112644667_112644872_112646350_112646452_112646587_112646672_112646790_112646956_112647033_112647128_112647198_112647550_112647689_112647835_112649534_112649687_112650460_112650583_112653076_112653237_112654067_112654160_112657246
H1_mix_00066795	chr4	+	1003	6	ISM	ENSG00000174720.17	ENST00000511529.2	1954	13	10058	3294	321	-868	internal_fragment	FALSE	canonical	3	207	junction_3	111.816635613848	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAAAACTTAATCAGCCTC	143	False	NA	NA	False	NA	NA	NA	112647210	112654113	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_112647550_112647650_112647835_112649534_112649687_112650460_112650583_112653076_112653237_112654067
H1_mix_00066796	chr4	+	775	4	NNC	ENSG00000174720.17	novel	1472	3	NA	NA	184	0	at_least_one_novel_splicesite	FALSE	canonical	3	143	junction_1	170.882675800939	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAAATGTGTTGATTTT	1992	False	NA	9	True	AATAAA	-17	NA	112652490	112657586	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_112652674_112653076_112653237_112654067_112654160_112657246
H1_mix_00066800	chr4	+	5623	23	FSM	ENSG00000145362.21	ENST00000681990.1	6006	23	94	289	84	-20	multi-exon	FALSE	canonical	3	26	junction_14	16.1703866669501	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGAAATTCTTATTGTTC	-7	True	NA	NA	False	GATAAA	-19	NA	113293421	113383932	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_113293539_113302766_113302840_113311254_113311400_113317706_113317810_113318516_113318621_113330245_113330471_113333053_113333209_113335845_113336058_113336576_113336782_113339225_113339323_113341687_113341917_113343016_113343143_113345899_113346023_113348275_113348309_113350227_113350250_113360822_113360898_113363337_113363470_113365038_113365183_113367565_113367852_113369513_113369806_113373089_113373174_113373284_113373450_113381456
H1_mix_00066801	chr4	+	5160	20	FSM	ENSG00000145362.21	ENST00000514960.5	5160	20	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_9	22.6958695157245	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGCAACGGTGATTTGTT	44	False	NA	16	True	AATAAA	-17	NA	113318584	113383732	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_113318621_113330245_113330471_113333053_113333209_113335845_113336058_113336576_113336782_113339225_113339323_113341687_113341917_113343016_113343143_113345899_113346023_113350227_113350250_113360822_113360898_113363337_113363470_113365038_113365183_113367565_113367852_113369513_113369806_113372532_113372626_113373089_113373174_113373284_113373450_113374763_113374947_113381456
H1_mix_00066802	chr4	+	4642	8	FSM	ENSG00000145362.21	ENST00000683908.1	5123	8	0	481	0	0	multi-exon	FALSE	canonical	3	48	junction_7	14.0087436252929	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTGATTTGTTCTTCTTTA	4363	False	NA	24	True	AATAAA	-25	NA	113359642	113383740	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_113360898_113363337_113363470_113365038_113365183_113367565_113367852_113369513_113369806_113373089_113373174_113373284_113373450_113381456
H1_mix_00066804	chr4	+	3972	6	NNC	ENSG00000174607.11	novel	2448	5	NA	NA	207	363	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	62.4608677493357	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTCATTTATTATTTAG	68	False	NA	10	True	AATAAA	-16	NA	114599013	114678588	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_114599058_114622878_114623703_114663994_114664138_114665679_114665757_114668084_114668305_114675924
H1_mix_00066805	chr4	+	4681	7	NIC	ENSG00000174607.11	novel	3733	6	NA	NA	-449	359	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	79.463653466363	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATTTATTCATTTATTAT	NA	False	NA	6	True	AATAAA	-12	NA	114598320	114678584	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_114598975_114619422_114619526_114622878_114623703_114663994_114664138_114665679_114665757_114668084_114668305_114675924
H1_mix_00066806	chr4	+	3733	6	FSM	ENSG00000174607.11	ENST00000310836.11	3733	6	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	23.1257432312996	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGTTGTTGGAATAAAA	24	True	NA	NA	False	AATAAA	-17	NA	114598806	114678225	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_114598975_114622878_114623703_114663994_114664138_114665679_114665757_114668084_114668305_114675924
H1_mix_00066808	chr4	+	1231	3	Intergenic	novelGene_1095	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	0.5	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAAGTATTTACTTTTT	NA	False	NA	6	True	AATAAA	-18	NA	117257678	117260174	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_117257722_117258103_117258166_117259048
H1_mix_00066809	chr4	+	327	3	FSM	ENSG00000269893.9	ENST00000602520.6	335	3	4	4	1	0	multi-exon	FALSE	canonical	3	282	junction_1	264.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTGTTCCTTGACTGAG	NA	False	NA	15	True	AATAAA	-21	NA	118278708	118279823	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_118278793_118279388_118279432_118279623
H1_mix_00066811	chr4	+	815	2	FSM	ENSG00000269893.9	ENST00000652022.2	818	2	0	3	0	-1	multi-exon	FALSE	canonical	3	415	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTCATTGTTCCTTGACT	-4	True	NA	12	True	AATAAA	-18	NA	118278754	118279820	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_118279138_118279388
H1_mix_00066812	chr4	+	473	4	FSM	ENSG00000269893.9	ENST00000688996.1	528	4	49	6	0	0	multi-exon	FALSE	canonical	3	82	junction_1	297.983221004136	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCATTGTTCCTTGACTG	-4	True	NA	13	True	AATAAA	-19	NA	118278754	118279821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_118278793_118278943_118279138_118279388_118279432_118279623
H1_mix_00066819	chr4	+	6751	11	FSM	ENSG00000145388.15	ENST00000388822.10	6642	11	-6	-103	-6	100	multi-exon	FALSE	canonical	2	157	junction_3	28.6048946860498	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTCTACTATTGAGC	-7	True	NA	118	True	AATAAA	-17	NA	118685385	118715533	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_118685601_118687922_118688012_118689369_118689458_118691531_118691613_118691980_118692069_118694435_118694527_118697181_118697324_118700549_118700643_118703934_118704052_118705610_118705822_118709997
H1_mix_00066822	chr4	+	5694	16	NIC	ENSG00000145390.12	novel	6356	17	NA	NA	-32	-8	combination_of_known_splicesites	FALSE	canonical	3	6	junction_2	17.2528902570619	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTTATATGATTGGACT	11	False	NA	7	True	GATAAA	-9	NA	119212680	119295510	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_119212874_119217549_119217674_119245336_119245430_119248747_119248883_119256245_119256360_119256440_119256524_119259819_119259926_119260506_119260654_119261714_119261865_119267319_119267483_119268267_119268421_119269690_119269838_119271295_119272035_119273631_119273709_119291164_119291262_119292337
H1_mix_00066824	chr4	+	6072	15	ISM	ENSG00000145390.12	ENST00000692078.1	6631	19	26503	1	-424	-1	3prime_fragment	FALSE	canonical	3	20	junction_1	15.7488256769856	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGATTGGACTTCTCTTT	NA	False	NA	14	True	GATAAA	-16	NA	119239215	119295517	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_119239904_119245336_119245430_119248747_119248883_119256245_119256360_119256440_119256524_119259819_119259926_119260506_119260654_119261714_119261865_119267319_119267483_119268267_119268421_119269690_119269838_119271295_119272035_119273631_119273709_119291164_119291262_119292337
H1_mix_00066826	chr4	+	1429	9	FSM	ENSG00000245958.7	ENST00000686002.1	1438	9	1	8	1	0	multi-exon	TRUE	canonical	3	82	junction_7	32.714436797842	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATAAATGTAGA	NA	False	NA	59	True	AATAAA	-24	NA	119454785	119499976	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_119455134_119460182_119460243_119460730_119460828_119461716_119461852_119462895_119462980_119493332_119493438_119494432_119494524_119497810_119497904_119499560
H1_mix_00066829	chr4	+	1869	6	FSM	ENSG00000245958.7	ENST00000693650.1	1806	6	-31	-32	-2	32	multi-exon	FALSE	canonical	3	13	junction_5	59.1831056974877	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTCTTTAATCCAGGG	NA	False	NA	53	True	NA	NA	NA	119454782	119480967	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_119455134_119460182_119460243_119460730_119460828_119461716_119461852_119462895_119462980_119479825
H1_mix_00066834	chr4	+	1538	13	FSM	ENSG00000123737.13	ENST00000379663.7	1529	13	-9	0	-7	0	multi-exon	FALSE	canonical	3	153	junction_10	188.49320279522	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGAACCCTGGGTATT	NA	False	NA	16	True	ATTAAA	-17	NA	121801310	121816909	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_121801491_121801826_121801922_121802673_121802794_121802914_121803018_121804621_121804760_121807539_121807623_121809966_121810100_121811582_121811672_121813233_121813381_121813865_121814048_121816143_121816195_121816368_121816448_121816771
H1_mix_00066843	chr4	+	4650	24	FSM	ENSG00000138688.17	ENST00000306802.8	4650	24	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	17.011060562895	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTAGTAGTTTTTCAAT	2447	False	NA	27	True	AATAAA	-19	NA	122324463	122362752	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_122324537_122325229_122325321_122325854_122325918_122328103_122328358_122331325_122331542_122333628_122333810_122334343_122334441_122336191_122336354_122336880_122337021_122339206_122339409_122343409_122343611_122344381_122344562_122346622_122346761_122347521_122347780_122348566_122348718_122349157_122349316_122349449_122349643_122349856_122350075_122352903_122353156_122353813_122354018_122355795_122355991_122356620_122356756_122359556_122359723_122362030
H1_mix_00066850	chr4	+	2603	2	FSM	ENSG00000164056.11	ENST00000622283.1	2352	2	-201	-50	0	50	multi-exon	FALSE	canonical	3	121	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTGACTTTTTCTTC	305	False	NA	NA	False	NA	NA	NA	123398184	123403810	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_123398514_123401536
H1_mix_00066852	chr4	+	13217	16	FSM	ENSG00000164066.13	ENST00000335251.11	13208	16	-9	0	-9	0	multi-exon	FALSE	canonical	3	16	junction_7	9.37988391304616	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTGCCTTTTTCATG	1	True	NA	14	True	AATAAA	-24	NA	127632947	127726737	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_127633181_127643520_127644057_127656635_127656722_127663380_127663585_127669035_127669155_127674123_127674214_127684408_127684487_127687677_127687868_127700009_127700064_127704227_127704291_127705590_127705813_127706486_127706970_127708570_127708669_127710912_127711103_127713935_127714094_127716324
H1_mix_00066855	chr4	+	5753	13	FSM	ENSG00000164074.16	ENST00000645843.2	5753	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	20.9138444311152	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTATCTCAATGTTGCTC	-2	True	NA	NA	False	AATAAA	-16	NA	127965405	128039953	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_127965607_127982938_127983048_127984338_127984424_127989720_127989822_128008919_128008999_128009106_128009192_128011672_128011701_128017362_128017502_128020079_128020170_128021136_128021239_128028474_128028854_128030509_128030673_128035761
H1_mix_00066856	chr4	+	498	3	ISM	ENSG00000164074.16	ENST00000611882.1	1493	11	-97	46276	-2	-24428	5prime_fragment	FALSE	canonical	3	71	junction_1	6	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCGTATGGATTTTTCAT	1	True	NA	NA	False	AATAAA	-14	NA	127965408	127984529	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_127965607_127982938_127983048_127984338
H1_mix_00066857	chr4	+	3105	12	FSM	ENSG00000138709.19	ENST00000512292.5	3105	12	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_11	45.098789633939	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGTGCTGATCTTATTC	-19	True	NA	-21	True	ATTAAA	-22	NA	128061285	128123869	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_128061402_128074459_128074519_128074933_128074994_128077787_128077963_128082164_128082306_128091000_128091145_128091346_128091513_128098185_128098331_128107138_128107314_128114569_128114743_128121825_128122189_128122481
H1_mix_00066858	chr4	+	3838	12	NIC	ENSG00000138709.19	novel	3105	12	NA	NA	23	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	51.3601768746472	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGTGCTGATCTTATTC	24	False	NA	-21	True	ATTAAA	-22	NA	128061370	128123869	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_128062220_128074459_128074519_128074933_128074994_128077787_128077963_128082164_128082306_128091000_128091145_128091346_128091513_128098185_128098331_128107138_128107314_128114569_128114743_128121825_128122189_128122481
H1_mix_00066859	chr4	+	2174	10	FSM	ENSG00000138709.19	ENST00000394288.7	2151	10	-23	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	19.9115327336313	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTTGTACATTTTTGTG	7	True	NA	12	True	AATAAA	-19	NA	128061311	128108901	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_128061402_128074459_128074519_128074933_128074994_128077787_128077963_128082164_128082306_128091000_128091145_128091346_128091513_128098185_128098331_128107138_128107314_128107882
H1_mix_00066860	chr4	+	2707	9	FSM	ENSG00000138709.19	ENST00000432347.6	2707	9	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	20.6700266085944	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTTGTACATTTTTGTG	1	True	NA	12	True	AATAAA	-19	NA	128061347	128108901	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_128061402_128074459_128074519_128074933_128074994_128077787_128077963_128082164_128082306_128091000_128091145_128091346_128091513_128098185_128098331_128107138
H1_mix_00066861	chr4	+	2563	10	FSM	ENSG00000138709.19	ENST00000648358.1	2563	10	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	38.1345894639007	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATTAACCATTTATGCAT	161	False	NA	-35	True	NA	NA	NA	128061693	128108854	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_128062220_128074459_128074519_128074933_128074994_128077787_128077963_128082164_128082306_128091000_128091145_128091346_128091513_128098185_128098331_128107138_128107314_128107882
H1_mix_00066865	chr4	+	5695	11	FSM	ENSG00000077684.16	ENST00000226319.11	5695	11	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_1	116.281726853362	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTGTCTTTTGAAAT	-17	True	NA	13	True	AATAAA	-22	NA	128809699	128875224	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_128809878_128831732_128831811_128842952_128843039_128846374_128846533_128848979_128849168_128852056_128852269_128855629_128855798_128857337_128857455_128861703_128862226_128867855_128867974_128871354
H1_mix_00066867	chr4	+	5644	11	FSM	ENSG00000077684.16	ENST00000610919.4	5644	11	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_1	157.677645847469	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTGTCTTTTGAAAT	-12	True	NA	13	True	AATAAA	-22	NA	128811269	128875224	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_128811397_128831732_128831811_128842952_128843039_128846374_128846533_128848979_128849168_128852056_128852269_128855629_128855798_128857337_128857455_128861703_128862226_128867855_128867974_128871354
H1_mix_00066868	chr4	+	4012	9	FSM	ENSG00000077684.16	ENST00000413543.6	4012	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	242.895939653177	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGTTTTCTCAAGTAAG	6	True	NA	8	True	AATAAA	-19	NA	128811325	128864630	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_128811404_128831732_128831811_128842952_128843039_128846374_128846533_128848979_128849168_128852056_128852269_128855629_128855798_128857337_128857455_128861703
H1_mix_00066869	chr4	+	6167	6	FSM	ENSG00000151470.13	ENST00000281146.9	6170	6	0	3	0	0	multi-exon	FALSE	canonical	3	11	junction_1	15.957443404255	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTATGTTTTTGAATTAGTT	NA	False	NA	NA	False	AATAAA	-19	NA	129093316	129116637	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_129094029_129102601_129102792_129106586_129106648_129109306_129109359_129109472_129109673_129111685
H1_mix_00066870	chr4	+	866	5	FSM	ENSG00000151470.13	ENST00000502887.5	1126	5	0	260	0	170	multi-exon	FALSE	canonical	3	11	junction_1	17.5837282736057	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACGAGTTTTTTCGAAATT	-20	True	NA	NA	False	AATAAA	-19	NA	129093699	129109706	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_129094029_129102601_129102792_129106586_129106648_129109306_129109359_129109472
H1_mix_00066871	chr4	+	5286	6	FSM	ENSG00000151470.13	ENST00000425929.6	5513	6	-15	242	8	-242	multi-exon	FALSE	canonical	3	46	junction_3	4.53431361950185	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCGCAGAGAATGCAAGGTT	-4	True	NA	NA	False	NA	NA	NA	129096136	129116395	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_129096210_129102601_129102792_129106586_129106648_129109306_129109359_129109472_129109673_129111685
H1_mix_00066878	chr4	+	6072	20	FSM	ENSG00000164134.13	ENST00000398947.1	6072	20	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_17	79.7179237588452	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTTTGGAAAAGATTAC	73	False	NA	-7	True	AATAAA	-1	NA	139301587	139391368	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_139301832_139334173_139334259_139336847_139336953_139340911_139341070_139342825_139342961_139344185_139344340_139349461_139349582_139351190_139351287_139351504_139351612_139354025_139354099_139357385_139357556_139359742_139359896_139360499_139360629_139361723_139361938_139370210_139370405_139376364_139376474_139378755_139378855_139384834_139384979_139386132_139386231_139387883
H1_mix_00066879	chr4	+	4463	2	FSM	ENSG00000172007.7	ENST00000305626.6	4248	2	-7	-208	-7	208	multi-exon	FALSE	canonical	3	105	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCATTCTCCATGTAAAGG	-3	True	NA	NA	False	NA	NA	NA	139454113	139476817	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_139454445_139472685
H1_mix_00066880	chr4	+	650	4	FSM	ENSG00000085871.9	ENST00000506797.5	634	4	-16	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	343.636435786428	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGTCTTTATTCTGTTT	-1	True	NA	2	True	AATAAA	-2	NA	139665818	139704224	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_139666078_139678542_139678643_139703454_139703537_139704015
H1_mix_00066884	chr4	+	1823	3	FSM	ENSG00000153130.18	ENST00000506597.2	1838	3	15	0	15	0	multi-exon	FALSE	canonical	3	59	junction_2	300	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGAGGTTGTGTGTGTTT	NA	False	NA	25	True	AATAAA	-8	NA	140373550	140382545	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_140373718_140379120_140379193_140380961
H1_mix_00066885	chr4	+	4995	4	FSM	ENSG00000153130.18	ENST00000608372.6	4995	4	0	0	0	0	multi-exon	FALSE	canonical	3	626	junction_3	14.522013940528	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGTGGTGATTGTCAT	4	True	NA	NA	False	AATAAA	-20	NA	140373645	140385728	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_140373718_140379120_140379193_140379568_140379653_140380961
H1_mix_00066888	chr4	+	4382	9	NNC	ENSG00000179387.10	novel	4399	9	NA	NA	-2	0	at_least_one_novel_splicesite	TRUE	canonical	3	23	junction_1	77.2422123906352	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGCCTTCCTGTTGATA	-14	True	NA	15	True	AATAAA	-18	NA	140524179	140553770	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_140524276_140525419_140525571_140527465_140527495_140535732_140535831_140537411_140537542_140540167_140540302_140542573_140542643_140543452_140543587_140550229
H1_mix_00066890	chr4	+	738	2	FSM	ENSG00000109445.11	ENST00000514826.5	733	2	-5	0	-5	0	multi-exon	FALSE	canonical	3	245	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCTACCTGTGCTAAGTG	-47	True	NA	NA	False	NA	NA	NA	141220881	141222876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_141221109_141222365
H1_mix_00066894	chr4	+	6977	10	FSM	ENSG00000170185.11	ENST00000307017.9	7081	10	-4	108	-4	0	multi-exon	FALSE	canonical	3	42	junction_1	4.83045891539648	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATTTCAAAAATACTGTAC	-5	True	NA	8	True	TATAAA	-18	NA	143184912	143223766	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_143186133_143187825_143187962_143195715_143195846_143197822_143197925_143203407_143203567_143206032_143206227_143209563_143209658_143212317_143212425_143213580_143214944_143220294
H1_mix_00066897	chr4	+	7683	24	FSM	ENSG00000153147.6	ENST00000283131.4	7684	24	0	1	0	-1	multi-exon	FALSE	canonical	3	1359	junction_9	145.577242243962	232	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGTTCATGTGATTATT	-19	True	NA	4	True	ATTAAA	-15	NA	143513701	143557485	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_143514102_143517354_143517430_143521428_143521596_143524366_143524468_143525450_143525552_143526280_143526461_143527867_143528024_143528582_143528715_143530457_143530527_143534854_143534965_143536451_143536679_143538589_143538712_143538785_143538939_143540362_143540496_143543508_143543658_143543852_143543973_143544736_143544848_143545469_143545584_143545924_143546048_143546775_143546909_143547384_143547504_143547927_143548141_143549996_143550105_143553118
H1_mix_00066898	chr4	+	1868	4	FSM	ENSG00000164161.10	ENST00000434550.2	1770	4	-117	19	-101	-19	multi-exon	FALSE	canonical	3	26	junction_1	3.74165738677394	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATACTACTTATACTACA	325	False	NA	NA	False	NA	NA	NA	144646054	144660254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_144646955_144652604_144652798_144658789_144658947_144659636
H1_mix_00066907	chr4	+	1221	4	FSM	ENSG00000151611.17	ENST00000506919.1	1687	4	0	466	0	-466	multi-exon	FALSE	canonical	3	23	junction_1	8.64098759787715	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGTGATATTCTATTT	NA	False	NA	NA	False	NA	NA	NA	145618984	145646156	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_145619408_145639074_145639579_145642362_145642486_145645985
H1_mix_00066912	chr4	+	887	1	FSM	ENSG00000279845.1	ENST00000625025.1	466	1	-208	-213	-208	213	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATCCTTCTCCACACAAA	4911	False	NA	NA	False	NA	NA	NA	146180642	146181529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_146180600_146181500
H1_mix_00066914	chr4	+	4154	8	FSM	ENSG00000151617.17	ENST00000324300.10	4150	8	-4	0	-4	0	multi-exon	FALSE	canonical	3	22	junction_7	3.44045559394066	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTGTCTCTTCATTTTTA	139	False	NA	11	True	AATAAA	-18	NA	147480912	147544954	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_147481377_147485611_147486102_147519850_147519979_147532505_147532705_147535876_147536030_147539816_147539951_147540376_147540486_147542477
H1_mix_00066918	chr4	+	3270	23	FSM	ENSG00000071205.12	ENST00000336498.8	3270	23	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_21	7.67105216527134	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTTGTCTGTCCTAAT	-20	True	NA	14	True	AATAAA	-14	NA	147732087	148072776	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_147732456_147822726_147822823_147822895_147822958_147847150_147847223_147857552_147857655_147864845_147864957_147866711_147866817_147875020_147875151_147879231_147879339_147881837_147881933_147906637_147906720_147909731_147909778_147913073_147913140_147939824_147939900_147946616_147946705_147955315_147955375_147965023_147965130_147966679_147966840_148023262_148023414_148046891_148047052_148063147_148063301_148064415_148064508_148071992
H1_mix_00066920	chr4	+	576	4	FSM	ENSG00000145425.10	ENST00000509736.5	576	4	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	8514.79032168275	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGCTTCTGAACATTC	13	True	NA	13	True	AATAAA	-16	NA	151099623	151104637	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_151099715_151102870_151103080_151104176_151104287_151104471
H1_mix_00066924	chr4	+	1113	1	FSM	ENSG00000270681.1	ENST00000603472.1	1113	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	182	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGATATTTTAGGTCT	4869	False	NA	NA	False	AATAAA	-25	NA	151139990	151141103	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_151140000_151141100
H1_mix_00066927	chr4	+	4224	12	NIC	ENSG00000164142.16	novel	11517	14	NA	NA	16	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	13.2353146437479	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATTTCATAGTGGGTTT	107	False	NA	16	True	TATAAA	-22	NA	151409367	151663635	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_151409466_151566137_151566365_151577449_151578077_151586640_151586800_151588839_151588927_151629701_151629870_151638676_151638757_151646557_151646749_151649458_151650593_151656231_151656411_151656759_151656899_151662500
H1_mix_00066931	chr4	+	2933	8	FSM	ENSG00000164144.16	ENST00000405727.6	1601	8	-84	-1248	-50	-445	multi-exon	FALSE	canonical	3	90	junction_1	78.8778440736959	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTTTCTCTGGACCTTCAT	21	True	NA	12	True	ATTAAA	-19	NA	152779886	152911912	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_152780092_152829624_152829727_152863605_152863715_152872451_152872565_152880962_152881185_152882722_152882881_152888132_152888308_152910063
H1_mix_00066932	chr4	+	4585	8	FSM	ENSG00000164144.16	ENST00000356064.3	1302	8	-14	-3269	0	1156	multi-exon	FALSE	canonical	3	184	junction_3	45.7116070643788	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTAGTCATTCAAGTAT	0	True	NA	NA	False	AATAAA	-15	NA	152779970	152913513	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_152780227_152829624_152829727_152863605_152863715_152872451_152872565_152880962_152881185_152882722_152882881_152888132_152888308_152910063
H1_mix_00066936	chr4	+	6774	12	FSM	ENSG00000109654.16	ENST00000675293.1	6752	12	-22	0	-22	0	multi-exon	TRUE	canonical	3	38	junction_1	44.3990171881397	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCAGAGTGAATATTTAT	-23	True	NA	14	True	AATAAA	-15	NA	153204420	153339317	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_153204561_153270337_153270520_153275892_153276131_153292981_153293134_153294304_153294486_153295312_153296037_153315484_153315589_153315831_153316000_153322647_153322817_153324077_153324149_153328529_153328671_153334813
H1_mix_00066939	chr4	+	7307	12	FSM	ENSG00000109654.16	ENST00000674872.1	7307	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	68.1696958920643	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATTTGCAGAGTGAAT	64	False	NA	8	True	AATAAA	-9	NA	153222306	153339311	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_153223040_153270334_153270520_153275892_153276131_153292981_153293134_153294304_153294429_153295312_153296037_153315484_153315589_153315831_153316000_153322647_153322817_153324077_153324149_153328529_153328671_153334813
H1_mix_00066941	chr4	+	790	3	FSM	ENSG00000109654.16	ENST00000482578.3	766	3	-24	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	65	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGACTACCTGCTCACT	-6	True	NA	14	True	ATTAAA	-17	NA	153257378	153276268	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_153257608_153270334_153270520_153275892
H1_mix_00066942	chr4	+	8108	11	FSM	ENSG00000109654.16	ENST00000675019.1	8088	11	-20	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	51.563165147225	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTGTTTTCTCCATTTG	-6	True	NA	-2	True	NA	NA	NA	153257378	153339301	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_153257608_153270337_153270520_153275892_153276131_153292981_153293134_153294304_153294486_153295312_153296037_153315484_153315589_153315831_153316000_153322647_153324149_153328529_153328671_153334813
H1_mix_00066944	chr4	+	929	8	FSM	ENSG00000121211.8	ENST00000240488.8	929	8	0	0	0	0	multi-exon	TRUE	canonical	3	259	junction_6	34.1461444920722	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAGATCAAAACCAT	-11	True	NA	29	True	AATAAA	-42	NA	153344687	153415118	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_153344741_153350063_153350130_153355653_153355712_153358473_153358623_153394261_153394337_153397218_153397334_153408970_153409016_153414750
H1_mix_00066946	chr4	+	5056	35	FSM	ENSG00000121210.16	ENST00000409663.7	5017	35	-39	0	-39	0	multi-exon	FALSE	canonical	3	73	junction_11	22.7275308258387	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGTGCTCTGTTTTTTT	NA	False	NA	99	True	AATAAA	-14	NA	153466306	153636711	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_153466522_153467210_153467282_153473844_153473889_153550072_153550142_153555786_153555911_153556965_153557083_153558257_153558369_153580825_153580904_153581406_153581561_153583189_153583249_153583563_153583673_153584837_153584932_153585457_153585612_153586208_153586380_153587741_153587812_153588889_153589008_153591052_153591195_153592474_153592585_153593798_153593872_153596257_153596386_153598589_153598733_153602151_153602339_153602541_153602728_153603302_153603453_153603801_153604431_153612251_153612401_153620755_153620881_153621682_153621850_153622897_153623084_153626146_153626226_153627604_153627688_153632717_153632839_153634191_153634281_153635431_153635572_153636300
H1_mix_00066948	chr4	+	5047	35	FSM	ENSG00000121210.16	ENST00000409959.8	5006	35	-41	0	-27	0	multi-exon	FALSE	canonical	3	115	junction_11	18.4578684190346	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGTGCTCTGTTTTTTT	NA	False	NA	99	True	AATAAA	-14	NA	153466318	153636711	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_153466522_153467210_153467282_153473844_153473889_153550072_153550142_153555786_153555911_153556965_153557083_153558257_153558369_153580825_153580904_153581406_153581561_153583189_153583249_153583563_153583673_153584834_153584932_153585457_153585612_153586208_153586380_153587741_153587812_153588889_153589008_153591052_153591195_153592474_153592585_153593798_153593872_153596257_153596386_153598589_153598733_153602151_153602339_153602541_153602728_153603302_153603453_153603801_153604431_153612251_153612401_153620755_153620881_153621682_153621850_153622897_153623084_153626146_153626226_153627604_153627688_153632717_153632839_153634191_153634281_153635431_153635572_153636300
H1_mix_00066950	chr4	+	4967	35	NNC	ENSG00000121210.16	novel	5017	35	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_28	29.2192671183631	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGTGCTCTGTTTTTTT	36	False	NA	99	True	AATAAA	-14	NA	153466392	153636711	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_153466522_153467210_153467282_153473844_153473889_153550072_153550142_153555786_153555911_153556965_153557083_153558257_153558369_153580825_153580904_153581406_153581561_153583189_153583249_153583563_153583673_153584837_153584932_153585457_153585612_153586208_153586380_153587741_153587812_153588889_153589008_153591052_153591195_153592474_153592585_153593798_153593872_153596257_153596386_153598589_153598733_153602151_153602339_153602541_153602728_153603302_153603453_153603801_153604431_153612251_153612401_153620755_153620881_153621682_153621850_153622900_153623084_153626146_153626226_153627604_153627688_153632717_153632839_153634191_153634281_153635431_153635572_153636300
H1_mix_00066955	chr4	+	4901	3	FSM	ENSG00000121207.12	ENST00000336356.4	4901	3	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_1	85.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCTCTTTAAATTTTAAA	0	True	NA	9	True	AATAAA	-18	NA	154743999	154753120	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_154744223_154744325_154744867_154748983
H1_mix_00066959	chr4	+	3029	10	FSM	ENSG00000109738.11	ENST00000264428.9	3033	10	4	0	4	0	multi-exon	TRUE	canonical	2	4	junction_9	3.23178657161089	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGTAATTCAGTGCTAT	-27	True	NA	NA	False	AATAAA	-21	NA	157076153	157172090	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_157076298_157077995_157078147_157120555_157120663_157122329_157122398_157136468_157136699_157136803_157136887_157138808_157138950_157143806_157143960_157152717_157153011_157170431
H1_mix_00066960	chr4	+	608	3	FSM	ENSG00000164124.11	ENST00000509278.5	1633	3	-103	1128	-77	190	multi-exon	FALSE	canonical	3	22	junction_1	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAATAGAGCTTAAAATTA	40	False	NA	NA	False	AATAAA	-22	NA	158210381	158212888	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_158210587_158211452_158211575_158212607
H1_mix_00066965	chr4	+	3111	13	FSM	ENSG00000171503.13	ENST00000511912.6	3111	13	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_6	11.1080551353011	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACTAAGGTGTCAAAAGAA	-20	True	NA	NA	False	NA	NA	NA	158672295	158709623	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_158672491_158680466_158680608_158682194_158682425_158684591_158684674_158685100_158685220_158690347_158690426_158695496_158695644_158697558_158697700_158698986_158699131_158703422_158703592_158706188_158706372_158706628_158706851_158708363
H1_mix_00066966	chr4	+	5817	12	FSM	ENSG00000171503.13	ENST00000684611.1	5797	12	-20	0	0	0	multi-exon	FALSE	canonical	3	59	junction_5	7.77897144192051	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTGGAACAAAATTTACC	-20	True	NA	NA	False	ATTAAA	-1	NA	158672295	158710742	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_158672491_158680466_158682425_158684591_158684674_158685100_158685220_158690347_158690426_158695496_158695644_158697558_158697700_158698986_158699131_158703422_158703592_158706188_158706372_158706628_158706851_158708363
H1_mix_00066968	chr4	+	3187	13	NIC	ENSG00000171503.13	novel	4614	14	NA	NA	-10	0	intron_retention	FALSE	canonical	3	36	junction_1	15.2260741274083	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAGAATAGTCACAAAATGA	79	False	NA	-41	True	NA	NA	NA	158672394	158708621	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_158672491_158679289_158680608_158682194_158682425_158684591_158684674_158685100_158685220_158690347_158690426_158695496_158695644_158697558_158697700_158698986_158699131_158703422_158703592_158706188_158706372_158706628_158706851_158708363
H1_mix_00066969	chr4	+	2466	2	FSM	ENSG00000171503.13	ENST00000683799.1	2444	2	-22	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCCCATAACCTAAGCAG	7786	False	NA	NA	False	AAGAAA	-13	NA	158680101	158683147	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_158681615_158682194
H1_mix_00066970	chr4	+	4399	12	FSM	ENSG00000171503.13	ENST00000682452.1	4399	12	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_5	11.4639211268791	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTTGGAACAAAATTTAC	7786	False	NA	NA	False	TATAAA	-27	NA	158680101	158710741	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_158680608_158682194_158682425_158684591_158684674_158685100_158685220_158690347_158690426_158695496_158695644_158697558_158697700_158698986_158699131_158703422_158703592_158706188_158706372_158706628_158706851_158708363
H1_mix_00066973	chr4	+	8055	29	NIC	ENSG00000109756.10	novel	8101	30	NA	NA	0	-18	combination_of_known_junctions	TRUE	canonical	3	16	junction_22	17.1477299622178	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGCCTATATTCTTAATG	7	True	NA	NA	False	AATAAA	-17	NA	159103078	159360151	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_159104232_159186641_159186713_159193199_159193257_159210499_159210584_159238808_159238885_159241200_159241369_159243773_159243792_159304341_159304474_159314590_159314769_159322346_159322484_159323458_159323618_159329857_159330011_159330333_159330499_159331430_159331539_159331629_159331834_159331925_159332035_159332450_159332698_159338310_159338469_159339113_159339355_159341563_159341948_159342978_159343191_159343280_159343405_159345105_159345330_159346788_159346999_159350136_159350290_159352684_159352911_159353486_159354047_159355852_159356159_159358113
H1_mix_00066976	chr4	+	2433	4	FSM	ENSG00000164129.12	ENST00000338566.8	1890	4	-74	-469	-74	469	multi-exon	FALSE	canonical	3	9	junction_3	1.69967317119759	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAATGTGCACAGATAA	551	False	NA	NA	False	ATTAAA	-16	NA	163343817	163352403	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_163344001_163345713_163345754_163347451_163347523_163350264
H1_mix_00066978	chr4	+	803	6	FSM	ENSG00000198498.10	ENST00000513272.5	803	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	345.144955055119	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTGATCTGCAGAAGTT	2	True	NA	NA	False	AATAGA	-2	NA	163494666	163519719	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_163494805_163507032_163507146_163512821_163512860_163514073_163514159_163517433_163517477_163519333
H1_mix_00066984	chr4	+	566	2	FSM	ENSG00000248329.6	ENST00000515275.1	551	2	-16	1	0	-1	multi-exon	FALSE	canonical	3	618	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTAACAGCTATTTGGGG	-7	True	NA	NA	False	NA	NA	NA	164877177	164879255	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_164877408_164878919
H1_mix_00066989	chr4	+	3164	15	FSM	ENSG00000109466.14	ENST00000226725.11	3185	15	21	0	21	0	multi-exon	FALSE	canonical	3	53	junction_1	13.4952750612795	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTCACAGTGTTCTTG	21	False	NA	12	True	AATAAA	-14	NA	165207581	165323147	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_165207903_165219933_165220060_165228806_165228914_165238777_165238900_165263196_165263360_165294358_165294469_165297608_165297726_165299506_165299657_165305607_165305726_165310552_165310751_165311463_165311566_165313237_165313367_165314025_165314167_165317825_165317970_165322031
H1_mix_00066990	chr4	+	1799	5	FSM	ENSG00000052802.13	ENST00000393766.6	1789	5	-10	0	7	0	multi-exon	FALSE	canonical	3	284	junction_1	603.396791091898	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCACTTTGAGCTCTTGAA	-29	True	NA	-15	True	ATTAAA	-39	NA	165327675	165343029	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_165327765_165337788_165337938_165338651_165338779_165340220_165340376_165341750
H1_mix_00066992	chr4	+	1555	6	NIC	ENSG00000052802.13	novel	2227	6	NA	NA	31	-636	combination_of_known_junctions	FALSE	canonical	3	150	junction_1	608.268493348127	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCCTTGGCTGGAGTGT	47	False	NA	NA	False	NA	NA	NA	165327751	165342393	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_165327947_165333339_165333626_165337788_165337938_165338651_165338779_165340220_165340376_165341750
H1_mix_00066997	chr4	+	4408	12	FSM	ENSG00000129116.19	ENST00000507735.6	4392	12	-16	0	7	0	multi-exon	FALSE	canonical	3	249	junction_1	23.0102384685636	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCAGTTTTAGTTTTCTG	NA	False	NA	5	True	AATAAA	-43	NA	168832011	168928445	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_168832172_168877722_168878395_168890921_168891058_168894578_168894678_168898492_168898715_168903756_168903907_168913926_168914022_168915894_168916028_168921533_168921742_168924254_168924421_168924944_168925079_168926212
H1_mix_00066998	chr4	+	3666	11	NIC	ENSG00000129116.19	novel	4392	12	NA	NA	26	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	74.3892465346975	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGCAGTTTTGTGAAGC	20	False	NA	-23	True	AATAAA	-15	NA	168832053	168928417	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_168832172_168890921_168891058_168894578_168894678_168898492_168898715_168903756_168903907_168913926_168914022_168915894_168916028_168921533_168921742_168924254_168924421_168924944_168925079_168926212
H1_mix_00067000	chr4	+	6151	13	FSM	ENSG00000109572.15	ENST00000513761.6	6635	13	0	484	0	2	multi-exon	FALSE	canonical	3	87	junction_12	15.7788536409405	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTGGCCTTTAATTATA	15	True	NA	12	True	ATTAAA	-18	NA	169620577	169723189	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_169621064_169635912_169636089_169680049_169680208_169687657_169687758_169689042_169689231_169690529_169690653_169692113_169692321_169695611_169695693_169697188_169697735_169703997_169704185_169706867_169707267_169713078_169713296_169719906
H1_mix_00067003	chr4	+	1569	4	FSM	ENSG00000250266.3	ENST00000654867.1	1569	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	172.541782379419	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCGTTGCGCATGTTTC	-3	True	NA	NA	False	AATAAA	-23	NA	170226587	170283723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_170226784_170273658_170273965_170276581_170276676_170282750
H1_mix_00067009	chr4	+	3290	11	FSM	ENSG00000164118.13	ENST00000457424.6	3290	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	33.8439063939138	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTTTATTTTATGCAT	-12	True	NA	NA	False	AATAAA	-13	NA	174283903	174333380	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_174284062_174297965_174298063_174299071_174299211_174302038_174302187_174303702_174303850_174304246_174304370_174308688_174308860_174309849_174310057_174310782_174310859_174316165_174316291_174331481
H1_mix_00067011	chr4	+	4358	12	ISM	ENSG00000164118.13	ENST00000396791.7	3824	14	64	11965	0	0	intron_retention	FALSE	canonical	3	26	junction_1	22.7134503421713	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTTGTTTCATGCCATT	-11	True	NA	14	True	AATAAA	-15	NA	174283968	174320328	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_174284062_174297965_174298063_174299071_174299211_174302038_174302187_174303702_174303850_174304246_174304370_174308688_174308860_174309849_174310057_174310782_174310859_174316165_174316291_174316529_174316568_174317334
H1_mix_00067014	chr4	+	4569	5	FSM	ENSG00000129128.13	ENST00000503362.2	4569	5	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_3	25.1843205189261	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTTGTGTTTCTAATGTG	-17	True	NA	15	True	AATAAA	-18	NA	176319965	176332245	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_176320220_176322169_176322244_176324180_176324258_176327161_176327278_176328197
H1_mix_00067015	chr4	+	2655	4	FSM	ENSG00000129128.13	ENST00000507678.5	2655	4	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_2	29.0631496343164	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTGTTGGTTTGTTTTT	8	True	NA	42	True	AATGAA	-35	NA	176319990	176328406	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_176322244_176324180_176324258_176327161_176327278_176328197
H1_mix_00067020	chr4	+	326	1	FSM	ENSG00000225356.3	ENST00000511599.1	336	1	11	-1	11	1	mono-exon	FALSE	NA	NA	NA	NA	NA	237	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTCCTATAATTTGAAGAT	NA	False	NA	NA	False	GATAAA	-36	NA	181522676	181523002	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_181522700_181523000
H1_mix_00067022	chr4	+	10966	29	NIC	ENSG00000218336.9	novel	3394	15	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_19	42.9332657285985	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTTTTTATATTTTTT	-18	True	NA	14	True	AATAAA	-16	NA	182144657	182803024	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_182144755_182323945_182324253_182346650_182346930_182600923_182601162_182628650_182628890_182653770_182653894_182673004_182673220_182679665_182679877_182680247_182680350_182680542_182680738_182681813_182682015_182688165_182688352_182714086_182714234_182728964_182729182_182730199_182730320_182730877_182731140_182736807_182737076_182738400_182738545_182743169_182743420_182744142_182744164_182751799_182752033_182753449_182753605_182754384_182755260_182773471_182773648_182774917_182775154_182789092_182789390_182792273_182793886_182796636_182796768_182799595
H1_mix_00067025	chr4	+	8463	26	NIC	ENSG00000218336.9	novel	3394	15	NA	NA	-11	-1895	combination_of_known_junctions	FALSE	canonical	3	53	junction_1	31.5942779629477	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTGTGATTTTTTTAAAA	8	True	NA	NA	False	AATAAA	-16	NA	182448987	182801129	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_182449084_182600923_182601162_182628650_182628890_182653770_182653894_182673004_182673220_182679665_182679877_182680247_182680350_182680542_182680738_182681813_182682015_182688165_182688352_182714086_182714234_182728964_182729182_182730199_182730320_182730877_182731140_182736807_182737076_182738400_182738545_182743169_182743420_182751799_182752033_182753449_182753605_182754384_182755260_182773471_182773648_182774917_182775154_182789092_182789390_182792273_182793886_182796636_182796768_182799595
H1_mix_00067028	chr4	+	8989	23	FSM	ENSG00000151718.16	ENST00000403733.8	8862	23	-118	-9	-118	9	multi-exon	FALSE	canonical	3	339	junction_9	45.7540135077363	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTAACTCACTCCTGCGT	0	True	NA	35	True	AATAAA	-26	NA	183099138	183320786	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_183099623_183193598_183193709_183207952_183208157_183208948_183209026_183240182_183240263_183245415_183245546_183248713_183248861_183249919_183249994_183253756_183254000_183259638_183259729_183260909_183261533_183264977_183265108_183265687_183265769_183265864_183265952_183268970_183269164_183271079_183271242_183280775_183280898_183282707_183282907_183284225_183284391_183285966_183286060_183289392_183289636_183312340_183312469_183315662
H1_mix_00067029	chr4	+	6356	23	FSM	ENSG00000151718.16	ENST00000448232.6	6356	23	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_17	96.1058838422024	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACTGGTTTCTGCACTTT	222	False	NA	5	True	AATACA	-10	NA	183099491	183318434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_183099623_183193598_183193709_183207952_183208157_183208948_183209026_183240182_183240263_183245415_183245546_183248713_183248861_183249919_183249994_183253756_183254000_183259638_183259729_183260909_183261533_183264977_183265108_183265687_183265769_183265864_183265952_183268970_183269164_183271079_183271242_183280775_183280970_183282707_183282907_183284225_183284391_183285966_183286060_183289392_183289636_183312340_183312469_183315662
H1_mix_00067032	chr4	+	2812	3	FSM	ENSG00000168564.6	ENST00000302350.4	2646	3	-166	0	-166	0	multi-exon	FALSE	canonical	3	48	junction_2	29.5	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTTTTTTTTCTCCAA	NA	False	NA	20	True	ATTAAA	-30	NA	183444468	183448198	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_183445070_183445534_183445635_183446087
H1_mix_00067035	chr4	+	2723	2	FSM	ENSG00000168556.7	ENST00000412117.1	599	2	14	-2138	14	352	multi-exon	FALSE	canonical	3	46	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCACTTTTTCATACGTA	-6	True	NA	NA	False	NA	NA	NA	183506095	183512781	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_183506319_183510281
H1_mix_00067037	chr4	+	4532	30	FSM	ENSG00000168538.16	ENST00000334690.11	4523	30	-9	0	-9	0	multi-exon	TRUE	canonical	3	143	junction_19	18.2479943679907	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGCTTGTCTGTCTCTAT	NA	False	NA	10	True	AATAAA	-16	NA	183659283	183713589	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_183659448_183663846_183664072_183666256_183666427_183667059_183667131_183668002_183668118_183674712_183674813_183675163_183675238_183677457_183677555_183679352_183679487_183680119_183680268_183682731_183682826_183683974_183684055_183684144_183684224_183684304_183684360_183684695_183684842_183685083_183685146_183685270_183685404_183686617_183686749_183691315_183691472_183692959_183693148_183693588_183693738_183693916_183694039_183694603_183694724_183697502_183697569_183697678_183697836_183701696_183701809_183704978_183705071_183706806_183706941_183708406_183708575_183712599
H1_mix_00067043	chr4	+	2031	13	FSM	ENSG00000164306.11	ENST00000515774.5	2007	13	-24	0	-24	0	multi-exon	FALSE	canonical	3	5	junction_2	14.5342029556338	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCCTTATTAATTAATCAA	NA	False	NA	16	True	ATTAAA	-30	NA	184649642	184694963	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_184649909_184652022_184652101_184659339_184659438_184661773_184661904_184665916_184666065_184672172_184672461_184678231_184678395_184682247_184682337_184685408_184685499_184685575_184685685_184691498_184691582_184691665_184691713_184694521
H1_mix_00067044	chr4	+	2164	14	FSM	ENSG00000164306.11	ENST00000314970.11	2164	14	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_6	10.6798488564976	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGGAGAAATCGCCTTAT	-9	True	NA	5	True	ATTAAA	-19	NA	184649737	184694952	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_184649909_184652022_184652101_184657081_184657321_184659339_184659438_184661773_184661904_184665916_184666065_184672172_184672461_184678231_184678395_184682247_184682337_184685408_184685499_184685575_184685685_184691498_184691582_184691665_184691713_184694521
H1_mix_00067046	chr4	+	1678	4	FSM	ENSG00000151729.11	ENST00000491736.1	1666	4	-12	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	841.299127672329	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGAAACATCAATAAAGACC	0	True	NA	-24	True	NA	NA	NA	185143265	185147241	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_185143484_185144763_185145251_185145354_185145900_185146813
H1_mix_00067055	chr4	+	2718	14	FSM	ENSG00000109794.14	ENST00000227065.8	2708	14	-12	2	-12	-2	multi-exon	FALSE	canonical	3	21	junction_2	9.57869924832912	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGTGATGTCATCTTTAT	-43	True	NA	NA	False	ATTAAA	-8	NA	186144828	186172665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_186145113_186149172_186149284_186149565_186149705_186151902_186152046_186153644_186153771_186154467_186154639_186155999_186156191_186157564_186157720_186162844_186162949_186163423_186163634_186165343_186165465_186166967_186167097_186167180_186167263_186171913
H1_mix_00067060	chr4	+	800	1	FSM	ENSG00000272218.1	ENST00000606881.1	432	1	-368	0	-368	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCGTATTTGGTATTCAT	1249	False	NA	7	True	AATAAA	-16	NA	186892183	186892983	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_186892200_186893000
H1_mix_00067068	chr4	+	970	6	FSM	ENSG00000249378.7	ENST00000667802.1	1139	6	-22	191	0	0	multi-exon	FALSE	canonical	1	2	junction_5	10.2097992144802	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGATTTCTCATACTACTT	1343	False	NA	NA	False	AATAAA	-24	NA	188455558	188486429	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_188455675_188456663_188456763_188476697_188476757_188477637_188477913_188485778_188485866_188486095
H1_mix_00067076	chr4	-	1428	4	NNC	ENSG00000186777.12	novel	2179	3	NA	NA	5	23664	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	25.5081686262787	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTTATACTCTTTCCCT	-9	True	NA	-9	True	TTTAAA	-6	NA	305469	247010	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_248054_295437_295534_296028_296156_305307
H1_mix_00067077	chr4	-	310	1	FSM	ENSG00000251689.1	ENST00000507882.1	310	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTTTTTTTTTTGAGA	NA	False	NA	NA	False	ATTAAA	-24	NA	270175	269865	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_269900_270200
H1_mix_00067080	chr4	-	1423	4	FSM	ENSG00000251595.7	ENST00000514396.5	1423	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	125.990299450218	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATTGATATAACAGTTC	87	False	NA	NA	False	NA	NA	NA	474051	425814	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_426974_437445_437512_472574_472702_473980
H1_mix_00067081	chr4	-	1649	5	NIC	ENSG00000182903.16	novel	1679	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	113.924042677567	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATTGATATAACAGTTC	-29	True	NA	NA	False	NA	NA	NA	474167	425814	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_426974_435769_435880_437445_437512_472574_472702_473980
H1_mix_00067082	chr4	-	466	4	NNC	ENSG00000182903.16	novel	664	3	NA	NA	0	-263	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	113.391161717109	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTGGGCATGATAATTTA	-29	True	NA	-132	True	NA	NA	NA	474167	444345	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_444433_467616_467682_472574_472702_473980
H1_mix_00067083	chr4	-	621	3	NNC	ENSG00000251595.7	novel	1815	3	NA	NA	-24	-30233	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	125	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGGTGATCATGACTG	-15	True	NA	NA	False	AATAAA	-36	NA	474153	456047	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_456369_472574_472702_473980
H1_mix_00067084	chr4	-	329	5	NNC	ENSG00000169020.10	novel	303	4	NA	NA	9	56016	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4832.3832823463	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAGAATTTGAGGAGCCAA	2	True	NA	NA	False	ACTAAA	-43	NA	674267	616419	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_616457_672437_672520_673302_673402_673911_673967_674211
H1_mix_00067085	chr4	-	779	1	FSM	ENSG00000242686.4	ENST00000598370.1	411	1	-423	55	106	50	mono-exon	FALSE	NA	NA	NA	NA	NA	380	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTCACCAACTTGTTTT	9939	False	NA	-7	True	NA	NA	NA	653683	652904	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_652900_653700
H1_mix_00067086	chr4	-	2195	4	FSM	ENSG00000242686.4	ENST00000468356.3	2120	4	79	-154	79	50	multi-exon	FALSE	canonical	1	2	junction_1	0.816496580927726	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTCACCAACTTGTTTT	8067	False	NA	-7	True	NA	NA	NA	656134	652904	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_653684_653757_653972_654064_654214_655081
H1_mix_00067087	chr4	-	937	1	FSM	ENSG00000272927.1	ENST00000609172.1	737	1	-203	3	-203	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCCATTCACCATCCATC	2053	False	NA	-17	True	AATAAA	-10	NA	662148	661211	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_661200_662100
H1_mix_00067088	chr4	-	393	3	FSM	ENSG00000169020.10	ENST00000515202.5	393	3	0	0	0	0	multi-exon	FALSE	canonical	3	11622	junction_1	69	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGCTCCTCATTTGCTG	7844	False	NA	-12	True	AATAAA	-21	NA	674121	672435	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_672520_673302_673402_673911
H1_mix_00067089	chr4	-	303	4	FSM	ENSG00000169020.10	ENST00000304312.5	303	4	0	0	0	0	multi-exon	FALSE	canonical	3	9537	junction_3	1016.96705944686	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGCTCCTCATTTGCTG	-7	True	NA	-12	True	AATAAA	-21	NA	674276	672435	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_672520_673302_673402_673911_673967_674211
H1_mix_00067090	chr4	-	300	3	FSM	ENSG00000169020.10	ENST00000505852.1	300	3	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	5763.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCGGCTCCTCATTTGC	-2	True	NA	-14	True	AATAAA	-19	NA	674330	672437	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_672520_673302_673402_674211
H1_mix_00067091	chr4	-	1239	8	NIC	ENSG00000169026.13	novel	1833	10	NA	NA	14	-288	combination_of_known_junctions	FALSE	canonical	3	21	junction_2	9.55328771274314	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGCTAGAGGACCCCAGAGG	28	False	NA	NA	False	NA	NA	NA	689169	682149	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_682377_682780_682891_683209_683368_683608_683762_684482_684600_684718_684857_686531_686691_688992
H1_mix_00067092	chr4	-	719	1	FSM	ENSG00000272588.1	ENST00000607877.1	719	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCAGGACTGAACGAATTA	NA	False	NA	NA	False	ATTAAA	-19	NA	757740	757021	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_757000_757700
H1_mix_00067093	chr4	-	618	2	FSM	ENSG00000249592.7	ENST00000503185.5	618	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAATGGGCGAGGCTGGAA	-2	True	NA	NA	False	AAAACA	-41	NA	781849	780148	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_780689_781771
H1_mix_00067094	chr4	-	3150	3	FSM	ENSG00000178950.18	ENST00000511345.5	3567	3	419	-2	419	0	multi-exon	FALSE	canonical	3	354	junction_1	9	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGTCTCCAGTGTGGA	NA	False	NA	-2	True	ATTAAA	-16	NA	853409	849275	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_849775_849891_850069_850935
H1_mix_00067095	chr4	-	2634	7	FSM	ENSG00000178950.18	ENST00000515868.5	3903	7	1272	-3	1272	1	multi-exon	FALSE	canonical	2	10	junction_3	123.609151045633	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTCTCCAGTGTGGAT	8840	False	NA	-1	True	ATTAAA	-17	NA	868685	849274	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_849775_849891_850069_850935_851975_865121_865245_866363_866535_866955_867433_868538
H1_mix_00067096	chr4	-	4191	25	NIC	ENSG00000178950.18	novel	4280	25	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	35	junction_24	72.8605855765348	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTCTCCAGTGTGGAT	-6	True	NA	-1	True	ATTAAA	-17	NA	932314	849274	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_849775_849891_850069_850935_851085_851749_851975_859605_859723_865121_865245_866363_866502_866955_867433_868538_868686_870710_870905_876529_876610_877089_877208_877614_877810_881906_882041_882696_882820_883314_883464_884036_884087_888846_888971_890531_890623_893376_893490_893873_894010_896459_896550_898032_898159_904636_904780_932042
H1_mix_00067097	chr4	-	4467	28	FSM	ENSG00000178950.18	ENST00000314167.9	4461	28	0	-6	0	5	multi-exon	FALSE	canonical	3	195	junction_7	39.8246499480438	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCCAGTGTGGATCCAC	-8	True	NA	3	True	ATTAAA	-21	NA	932316	849270	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_849775_849891_850069_850935_851085_851749_851975_859605_859723_865121_865245_866363_866535_866955_867433_868538_868686_870710_870905_876529_876610_877089_877208_877614_877810_881906_882041_882696_882820_883314_883464_884036_884087_888846_888971_890531_890623_893376_893490_893873_894010_896459_896550_898032_898159_904636_904780_911672_911788_912734_912795_913606_913669_932042
H1_mix_00067098	chr4	-	4287	25	FSM	ENSG00000178950.18	ENST00000511163.5	4280	25	0	-7	0	5	multi-exon	FALSE	canonical	3	35	junction_24	61.1385039616334	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCCAGTGTGGATCCAC	18	False	NA	3	True	ATTAAA	-21	NA	932373	849270	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_849775_849891_850069_850935_851085_851749_851975_859605_859723_865121_865245_866363_866535_866955_867433_868538_868686_870710_870905_876529_876610_877089_877208_877614_877810_881906_882041_882696_882820_883314_883464_884036_884087_888846_888971_890531_890623_893376_893490_893873_894010_896459_896550_898032_898159_904636_904780_932042
H1_mix_00067099	chr4	-	4285	26	NIC	ENSG00000178950.18	novel	4461	28	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_24	63.3495193351931	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGTCTCCAGTGTGGA	-6	True	NA	-2	True	ATTAAA	-16	NA	932314	849275	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_849775_849891_850069_850935_851085_851749_851975_859605_859723_865121_865245_866363_866535_866955_867433_868538_868686_870710_870905_876529_876610_877089_877208_877614_877810_881906_882041_882696_882820_883314_883464_884036_884087_888846_888971_890531_890623_893376_893490_893873_894010_896459_896550_898032_898159_904636_904780_913606_913669_932042
H1_mix_00067101	chr4	-	555	3	FSM	ENSG00000178950.18	ENST00000504947.1	555	3	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_1	10	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACATCTGCAGGAACATG	NA	False	NA	NA	False	NA	NA	NA	884390	882767	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_882820_883314_883464_884036
H1_mix_00067106	chr4	-	4649	23	FSM	ENSG00000145214.14	ENST00000273814.8	4649	23	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_10	12.4532182438155	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTCTTCCTCATCTTTG	-5	True	NA	-2	True	AATACA	-21	NA	973569	958886	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_960722_961048_961202_961466_961579_961687_961835_961981_962083_962434_962614_962771_962921_963138_963291_965175_965292_965490_965530_965927_966079_966465_966528_966747_966803_966963_967055_967128_967362_967548_967650_967727_967803_967879_968028_968281_968408_968478_968565_968810_968911_970992_971073_973211
H1_mix_00067107	chr4	-	659	6	FSM	ENSG00000178222.13	ENST00000514757.5	991	6	338	-6	-16	2	multi-exon	FALSE	canonical	1	2	junction_1	5.23067873224881	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGCATACATGTGATATGT	NA	False	NA	-2	True	AATAAA	-22	NA	1081619	1056247	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_1056504_1056837_1057005_1058320_1058394_1073598_1073663_1079642_1079689_1081566
H1_mix_00067108	chr4	-	2336	10	FSM	ENSG00000178222.13	ENST00000382968.9	2335	10	-32	31	-30	-31	multi-exon	FALSE	canonical	2	6	junction_1	3.47832796499967	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATCAGATAAATATGTATC	NA	False	NA	-53	True	NA	NA	NA	1113594	1071508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_1073141_1073598_1073663_1079642_1079689_1081418_1081468_1081566_1081620_1085895_1085955_1090781_1090839_1096764_1096840_1108342_1108405_1113355
H1_mix_00067109	chr4	-	886	2	FSM	ENSG00000159674.12	ENST00000509697.1	886	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTGATATGGGTGTGGG	2442	False	NA	NA	False	NA	NA	NA	1171070	1169762	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_1170577_1170998
H1_mix_00067110	chr4	-	2500	10	FSM	ENSG00000159692.16	ENST00000382952.8	2488	10	0	-12	0	12	multi-exon	FALSE	canonical	3	764	junction_9	169.005661385194	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTCTGGTGACTTTCTC	-12	True	NA	-4	True	AATAAA	-30	NA	1249130	1211432	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_1212424_1212912_1213031_1213477_1213606_1214342_1214474_1215990_1216206_1225359_1225567_1228198_1228344_1238182_1238338_1241324_1241520_1248915
H1_mix_00067111	chr4	-	2329	10	NIC	ENSG00000159692.16	novel	2488	10	NA	NA	22	1	combination_of_known_junctions	FALSE	canonical	3	152	junction_9	351.906904075215	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGTGCCCAGCATCTATT	-12	True	NA	-18	True	AATAAA	-16	NA	1248718	1211446	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_1212424_1212912_1213031_1213477_1213606_1214342_1214474_1215990_1216206_1225359_1225567_1228198_1228344_1238182_1238338_1241324_1241520_1248660
H1_mix_00067112	chr4	-	2489	10	NIC	ENSG00000159692.16	novel	2488	10	NA	NA	2	12	combination_of_known_junctions	FALSE	canonical	3	475	junction_1	282.507205195999	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTCTGGTGACTTTCTC	2	True	NA	-4	True	AATAAA	-30	NA	1249116	1211432	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_1212427_1212912_1213031_1213477_1213606_1214342_1214474_1215990_1216206_1225359_1225567_1228198_1228344_1238182_1238338_1241324_1241520_1248915
H1_mix_00067113	chr4	-	2280	9	NIC	ENSG00000159692.16	novel	2297	9	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	172	junction_8	424.600105982088	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGTGCCCAGCATCTATT	2	True	NA	-18	True	AATAAA	-16	NA	1249116	1211446	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_1212427_1212912_1213031_1213477_1213606_1214342_1214474_1215990_1216206_1225359_1225567_1228198_1228344_1238182_1238338_1248915
H1_mix_00067114	chr4	-	2312	9	FSM	ENSG00000159692.16	ENST00000290921.10	2297	9	0	-15	0	12	multi-exon	FALSE	canonical	3	172	junction_8	366.694610677605	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTCTGGTGACTTTCTC	-19	True	NA	-4	True	AATAAA	-30	NA	1249137	1211432	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_1212424_1212912_1213031_1213477_1213606_1214342_1214474_1215990_1216206_1225359_1225567_1228198_1228344_1238182_1238338_1248915
H1_mix_00067118	chr4	-	582	2	FSM	ENSG00000244459.3	ENST00000466692.2	853	2	274	-3	211	3	multi-exon	FALSE	canonical	2	5	junction_1	0	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTCTGGTGTGCAGTGTG	216	False	NA	-4	True	NA	NA	NA	1580253	1574058	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_1574545_1580157
H1_mix_00067119	chr4	-	628	2	FSM	ENSG00000174137.14	ENST00000489029.1	628	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTGCCGACTGCTCCTG	NA	False	NA	NA	False	NA	NA	NA	1655408	1617914	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_1618112_1654977
H1_mix_00067120	chr4	-	1810	8	FSM	ENSG00000163950.13	ENST00000489418.6	1810	8	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_7	27.2021907881235	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTGCCTTTCTTGTG	-2	True	NA	-5	True	NA	NA	NA	1712319	1692730	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_1693714_1694773_1694841_1696201_1696352_1699563_1699702_1700010_1700071_1703595_1703701_1711873_1711991_1712129
H1_mix_00067121	chr4	-	1635	8	FSM	ENSG00000163950.13	ENST00000318386.8	1635	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	167.299072298195	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACGTTTCTATTGCTTTT	9085	False	NA	-27	True	NA	NA	NA	1712250	1692857	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_1693714_1694773_1694841_1696201_1696352_1699563_1699702_1700010_1700092_1703595_1703701_1711873_1711991_1712129
H1_mix_00067122	chr4	-	2813	4	FSM	ENSG00000168936.11	ENST00000382936.8	2803	4	0	-10	0	10	multi-exon	FALSE	canonical	3	228	junction_3	11.0855260988773	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTGCCCGATATTAA	12	True	NA	7	True	AATAAA	-27	NA	1721323	1715941	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_1717429_1717515_1717676_1718151_1718627_1720632
H1_mix_00067124	chr4	-	2675	3	FSM	ENSG00000168936.11	ENST00000303277.6	2678	3	13	-10	13	10	multi-exon	FALSE	canonical	3	30	junction_1	99	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTGCCCGATATTAA	-10	True	NA	7	True	AATAAA	-27	NA	1721345	1715941	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_1717429_1718151_1718627_1720632
H1_mix_00067125	chr4	-	3029	4	NNC	ENSG00000168936.11	novel	2803	4	NA	NA	13	10	intron_retention	TRUE	canonical	3	17	junction_3	109.693512418313	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTGCCCGATATTAA	-10	True	NA	7	True	AATAAA	-27	NA	1721345	1715941	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_1717429_1717515_1717676_1718151_1718627_1720438
H1_mix_00067126	chr4	-	5317	2	FSM	ENSG00000168936.11	ENST00000476253.1	958	2	-3436	-923	13	10	multi-exon	FALSE	canonical	3	244	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTGCCCGATATTAA	-10	True	NA	7	True	AATAAA	-27	NA	1721345	1715941	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_1717429_1717515
H1_mix_00067127	chr4	-	1100	3	FSM	ENSG00000168936.11	ENST00000460722.1	1100	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	117.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACAGGTCAGAGCGCCCTC	3100	False	NA	NA	False	GGGGCT	-26	NA	1718235	1716600	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_1717429_1717515_1717704_1718151
H1_mix_00067128	chr4	-	5375	14	FSM	ENSG00000168924.15	ENST00000302787.3	5371	14	0	-4	0	4	multi-exon	FALSE	canonical	3	164	junction_11	23.8183460691009	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAGTAATAATATTTCTG	-19	True	NA	-1	True	ATTAAA	-28	NA	1856156	1811474	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_1814574_1815663_1815803_1816726_1816915_1819337_1819473_1822180_1822313_1822987_1823132_1823643_1823776_1825563_1825684_1832743_1832948_1834844_1834983_1836428_1836573_1841346_1841798_1849148_1849210_1855868
H1_mix_00067129	chr4	-	746	4	FSM	ENSG00000168924.15	ENST00000511977.1	746	4	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_2	15.7973274814304	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGGAGATATACCTTAGCC	6468	False	NA	NA	False	NA	NA	NA	1832879	1822773	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_1823132_1823643_1823776_1825563_1825684_1832743
H1_mix_00067131	chr4	-	2508	10	FSM	ENSG00000185049.16	ENST00000463820.5	2495	10	0	-13	0	0	multi-exon	FALSE	canonical	3	381	junction_3	25.0530301757623	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTGTGTTTGGGGCCAG	NA	False	NA	-6	True	ATTAAA	-27	NA	1992244	1982716	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_1983504_1983595_1983696_1983847_1984114_1984807_1984920_1985775_1985865_1986113_1986184_1986271_1986403_1987917_1988008_1989707_1989870_1991543
H1_mix_00067134	chr4	-	5879	6	FSM	ENSG00000214367.9	ENST00000443786.3	5879	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_5	44.3558338891289	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAAGCAGTGATATGCTC	4	True	NA	NA	False	NA	NA	NA	2242121	2228348	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_2232161_2236227_2236457_2238603_2239044_2240037_2241094_2241519_2241791_2242050
H1_mix_00067135	chr4	-	7221	5	FSM	ENSG00000214367.9	ENST00000243706.8	5620	5	12	-1613	0	728	multi-exon	FALSE	canonical	3	24	junction_4	61.4750965839014	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTAAGTCACACCAAACTG	4	True	NA	NA	False	AATAAA	-24	NA	2242121	2226735	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_2232161_2236227_2236457_2238603_2239044_2240037_2241094_2242050
H1_mix_00067136	chr4	-	7752	5	ISM	ENSG00000214367.9	ENST00000443786.3	5879	6	0	-1613	0	728	intron_retention	FALSE	canonical	3	145	junction_4	11.247221879202	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTAAGTCACACCAAACTG	4	True	NA	NA	False	AATAAA	-24	NA	2242121	2226735	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_2232161_2236227_2236457_2238603_2239044_2240037_2241094_2241519
H1_mix_00067137	chr4	-	574	3	FSM	ENSG00000214367.9	ENST00000502440.1	574	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	62.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAATTGGTTATCCC	-3	True	NA	NA	False	NA	NA	NA	2242128	2240915	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_2241094_2241519_2241838_2242050
H1_mix_00067138	chr4	-	3871	6	FSM	ENSG00000123933.17	ENST00000337190.7	3871	6	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_2	29.5607848339654	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGCTGGCTCCGGCTCTT	-5	True	NA	-3	True	TATAAA	-20	NA	2262109	2247431	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_2250702_2251083_2251247_2252407_2252523_2257981_2258012_2261724_2261825_2261916
H1_mix_00067139	chr4	-	4228	3	FSM	ENSG00000123933.17	ENST00000513372.5	4228	3	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_2	11.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAACCATTT	7067	False	NA	NA	False	NA	NA	NA	2255234	2249463	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_2250702_2251083_2251247_2252407
H1_mix_00067140	chr4	-	624	6	FSM	ENSG00000123933.17	ENST00000513380.1	624	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	219.718365185981	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTTGGCAGCAGCAGTGA	502	False	NA	NA	False	NA	NA	NA	2261799	2250657	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_2250702_2251083_2251247_2252407_2252523_2255154_2255352_2257981_2258012_2261724
H1_mix_00067142	chr4	-	4119	13	FSM	ENSG00000159733.14	ENST00000290974.7	4114	13	0	-5	0	5	multi-exon	FALSE	canonical	2	5	junction_5	3.41869858279434	187	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTTCTTCCATGAACG	13	True	NA	6	True	CATAAA	-23	NA	2418645	2269591	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_2270857_2271310_2271415_2271674_2271780_2273172_2273290_2274061_2274217_2304288_2305537_2320169_2320272_2335704_2335795_2337406_2337497_2339452_2339656_2341477_2341616_2353932_2354074_2418284
H1_mix_00067145	chr4	-	1994	6	FSM	ENSG00000168884.15	ENST00000510267.5	2006	6	0	12	0	-12	multi-exon	FALSE	canonical	3	13	junction_5	137.505490799459	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGAATTTGTGTTGGAA	16	True	NA	-6	True	AATAAA	-22	NA	2756331	2741659	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_2742521_2744386_2744507_2744696_2744946_2745445_2745536_2747654_2747946_2755948
H1_mix_00067146	chr4	-	1934	6	FSM	ENSG00000168884.15	ENST00000315423.12	1946	6	0	12	0	-12	multi-exon	FALSE	canonical	3	289	junction_2	38.270615359568	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGAATTTGTGTTGGAA	11	True	NA	-6	True	AATAAA	-22	NA	2756336	2741659	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_2742521_2744386_2744507_2744696_2744946_2745445_2745536_2747654_2747946_2756013
H1_mix_00067148	chr4	-	923	2	FSM	ENSG00000168884.15	ENST00000502256.1	923	2	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCCAGTGAGGCTGGAG	1370	False	NA	NA	False	NA	NA	NA	2744863	2742074	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_2742521_2744386
H1_mix_00067151	chr4	-	1772	11	FSM	ENSG00000109736.15	ENST00000514800.5	1776	11	0	4	0	0	multi-exon	FALSE	canonical	3	582	junction_8	79.7095351887088	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGCCTTTCGCCATAT	8491	False	NA	-8	True	AATAAA	-19	NA	2933947	2930564	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_2931151_2931226_2931275_2931374_2931466_2931554_2931664_2931824_2931937_2932044_2932154_2932350_2932513_2932599_2932759_2933105_2933210_2933566_2933664_2933752
H1_mix_00067152	chr4	-	2173	12	FSM	ENSG00000109736.15	ENST00000329687.8	2173	12	0	0	0	0	multi-exon	FALSE	canonical	3	582	junction_9	78.0164212423966	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCAAGTGCCTTTCGCCA	7980	False	NA	-11	True	AATAAA	-16	NA	2934458	2930567	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_2930954_2931060_2931151_2931226_2931275_2931374_2931466_2931554_2931664_2931824_2931937_2932044_2932154_2932350_2932513_2932599_2932759_2933105_2933210_2933566_2933664_2933752
H1_mix_00067154	chr4	-	1579	12	FSM	ENSG00000109736.15	ENST00000507555.1	1573	12	0	-6	0	0	multi-exon	FALSE	canonical	3	17	junction_4	226.644221867192	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTTTCTGATGATGAAATA	-12	True	NA	21	True	TTTAAA	-10	NA	2934834	2930604	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_2930954_2931060_2931151_2931226_2931275_2931374_2931466_2931824_2931937_2932044_2932154_2932350_2932513_2932599_2932759_2933105_2933210_2933566_2933664_2933752_2933945_2934768
H1_mix_00067156	chr4	-	1178	6	FSM	ENSG00000109736.15	ENST00000509676.1	1178	6	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_5	134.866452463168	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCCACCCTCTGGAGACA	26	True	NA	NA	False	NA	NA	NA	2934796	2932064	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_2932154_2932350_2932513_2932599_2933210_2933566_2933664_2933752_2933945_2934768
H1_mix_00067157	chr4	-	2895	19	FSM	ENSG00000087269.16	ENST00000314262.10	2889	19	0	-6	0	0	multi-exon	FALSE	canonical	2	5	junction_1	36.2545867681373	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTTTGCAGATATTTTAG	12	True	NA	-25	True	TATAAA	-6	NA	2963368	2937935	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_2938189_2938811_2938931_2939187_2939344_2939526_2939646_2941581_2941730_2942191_2942352_2944072_2944227_2945127_2945230_2946411_2946548_2947525_2947612_2948277_2948409_2949933_2950214_2951113_2951246_2952274_2952398_2953510_2953646_2954423_2954564_2956669_2956812_2957605_2957741_2963124
H1_mix_00067158	chr4	-	3556	18	FSM	ENSG00000087269.16	ENST00000416614.7	3556	18	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_11	14.4705882352941	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTTTGCAGATATTTTAG	-26	True	NA	-25	True	TATAAA	-6	NA	2963406	2937935	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_2938931_2939187_2939344_2939526_2939646_2941581_2941730_2942191_2942352_2944072_2944227_2945127_2945230_2946411_2946548_2947525_2947612_2948277_2948409_2949933_2950214_2951113_2951246_2952274_2952398_2953510_2953646_2954423_2954564_2956669_2956812_2957605_2957741_2963124
H1_mix_00067159	chr4	-	10449	8	FSM	ENSG00000163956.13	ENST00000650182.1	10446	8	0	-3	0	3	multi-exon	TRUE	canonical	3	904	junction_4	46.5639783699015	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCTTTGATCCATGTG	-1	True	NA	-11	True	NA	NA	NA	3532422	3503608	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_3513037_3514751_3514929_3516115_3516199_3518033_3518193_3518870_3518992_3520071_3520194_3524906_3525052_3532208
H1_mix_00067160	chr4	-	654	3	NNC	ENSG00000271977.1	novel	530	4	NA	NA	-5320	-6192	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	0.5	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGGGCACAGTGGCTCA	NA	False	NA	-9	True	AATAAA	-20	NA	3929594	3921378	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_3921783_3924070_3924268_3929541
H1_mix_00067161	chr4	-	1607	3	FSM	ENSG00000251669.6	ENST00000507301.5	624	3	-70	-913	-1	-179	multi-exon	FALSE	canonical	3	36	junction_1	2	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAATCTACAGATGATCTG	-3	True	NA	-10	True	AATAAA	-26	NA	3955433	3941938	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_3943373_3953110_3953174_3955323
H1_mix_00067166	chr4	-	350	2	Intergenic	novelGene_1004	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	42	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCCGTACTGCTTTACTTC	NA	False	NA	NA	False	AGTAAA	-21	NA	4036988	4035809	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_-_4036083_4036911
H1_mix_00067169	chr4	-	1753	5	FSM	ENSG00000132406.12	ENST00000254742.6	1737	5	0	-16	0	16	multi-exon	FALSE	canonical	3	29	junction_4	137.190333114254	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCGAACTTTGGAATAACT	5	True	NA	10	True	AATAAA	-33	NA	4248212	4235525	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_4236257_4237826_4237936_4240320_4240480_4246201_4246344_4247600
H1_mix_00067170	chr4	-	1259	5	FSM	ENSG00000132406.12	ENST00000382753.5	1243	5	0	-16	0	16	multi-exon	FALSE	canonical	3	268	junction_1	42.9592830480212	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCGAACTTTGGAATAACT	-6	True	NA	10	True	AATAAA	-33	NA	4248223	4235525	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_4236257_4237826_4237936_4240320_4240480_4246201_4246344_4248105
H1_mix_00067171	chr4	-	2069	5	NNC	ENSG00000132406.12	novel	1737	5	NA	NA	0	16	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_1	128.967050055431	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCGAACTTTGGAATAACT	5	True	NA	10	True	AATAAA	-33	NA	4248212	4235525	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_4237078_4237826_4237936_4240320_4240480_4246201_4246344_4248105
H1_mix_00067173	chr4	-	1624	10	FSM	ENSG00000145220.14	ENST00000343470.9	1554	10	0	-70	0	70	multi-exon	FALSE	canonical	3	317	junction_4	31.6290224592603	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGCAACAAGTAAAAAAGTAA	6	True	NA	70	True	NA	NA	NA	4290154	4267630	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_4268024_4268529_4268616_4273582_4273670_4274366_4274770_4279446_4279531_4279641_4279750_4281782_4281898_4283620_4283796_4286518_4286573_4290035
H1_mix_00067174	chr4	-	2141	11	FSM	ENSG00000168818.10	ENST00000306200.7	2158	11	17	0	0	0	multi-exon	FALSE	canonical	3	166	junction_4	23.7915951545919	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGGCTCGGCCTCTGCAC	310	False	4542051	NA	False	AATAAA	-20	NA	4542031	4418967	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_4420130_4420863_4420945_4423517_4423588_4425163_4425223_4434769_4434859_4438393_4438510_4457190_4457258_4457422_4457501_4459371_4459488_4471638_4471707_4541796
H1_mix_00067175	chr4	-	989	4	FSM	ENSG00000170891.11	ENST00000307746.9	989	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	8.48528137423857	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGTCCTGTTATATCTG	-2	True	NA	0	True	AATAAA	-21	NA	5019458	5014585	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_5015235_5016835_5016965_5017134_5017180_5019292
H1_mix_00067176	chr4	-	4400	22	FSM	ENSG00000173040.13	ENST00000344408.10	4382	22	0	-18	0	18	multi-exon	FALSE	canonical	3	19	junction_17	5.11677690501468	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTGCTTTATGTAGGA	-2	True	NA	NA	False	AATAAA	-34	NA	5708559	5562420	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_5563116_5565257_5565360_5568443_5568641_5574684_5574773_5576239_5576455_5584622_5584851_5615421_5615545_5618477_5618683_5622536_5622992_5625748_5625909_5628558_5628735_5631792_5632033_5640513_5640839_5663106_5663247_5665514_5665650_5681259_5681314_5685369_5685480_5689156_5689344_5691264_5691334_5694334_5694502_5697592_5697648_5708285
H1_mix_00067177	chr4	-	4331	22	FSM	ENSG00000173040.13	ENST00000310917.6	4828	22	515	-18	30	18	multi-exon	FALSE	canonical	3	7	junction_21	6.83229625446991	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTGCTTTATGTAGGA	NA	False	NA	NA	False	AATAAA	-34	NA	5709033	5562420	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_5563116_5565257_5565360_5568443_5568641_5574684_5574773_5576239_5576455_5584622_5584851_5615421_5615545_5618477_5618683_5622536_5622992_5625748_5625909_5628558_5628735_5631792_5632033_5640513_5640839_5663106_5663247_5665514_5665650_5681259_5681314_5685369_5685480_5689156_5689344_5691264_5691334_5694334_5694502_5697592_5697648_5708828
H1_mix_00067178	chr4	-	2930	14	FSM	ENSG00000072832.15	ENST00000397890.6	2911	14	0	-19	0	0	multi-exon	FALSE	canonical	3	556	junction_3	43.689192738367	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGGTGGTGTCTGGA	-19	True	NA	-4	True	AATAAA	-40	NA	5888481	5820763	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_5821852_5825493_5825660_5828488_5828669_5835914_5836086_5836764_5836907_5839521_5839679_5841307_5841429_5843092_5843162_5849391_5849473_5851407_5851470_5856142_5856308_5861025_5861211_5866667_5866757_5888227
H1_mix_00067180	chr4	-	5048	14	FSM	ENSG00000072832.15	ENST00000324989.12	3174	14	0	-1874	0	1874	multi-exon	FALSE	canonical	3	41	junction_13	161.17765566725	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACTTCTGTTACCGATTT	-3	True	NA	NA	False	NA	NA	NA	5893086	5818889	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_5821852_5825493_5825660_5828488_5828669_5835914_5836086_5836764_5836907_5839521_5839679_5841307_5841429_5843092_5843162_5849391_5849473_5851407_5851470_5856142_5856308_5861025_5861211_5866667_5866757_5892588
H1_mix_00067181	chr4	-	2575	13	FSM	ENSG00000152969.20	ENST00000282924.9	2585	13	12	-2	12	2	multi-exon	FALSE	canonical	3	27	junction_11	9.78199877325692	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTTTTTTATTTGTG	-5	True	NA	0	True	AATAAA	-20	NA	6200579	6053754	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_6054149_6056696_6056760_6060423_6060508_6062311_6062441_6064879_6065009_6078938_6078999_6080171_6080313_6081608_6081756_6084845_6084966_6085419_6085630_6105472_6105968_6112721_6112998_6200252
H1_mix_00067182	chr4	-	4450	9	FSM	ENSG00000074211.14	ENST00000382599.9	4450	9	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_1	2.10653744329409	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGGTCCAGAATGCTGTTT	-8	True	NA	0	True	AATAAA	-23	NA	6472614	6320580	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_6323594_6329261_6329354_6333561_6333732_6347845_6348011_6372522_6372701_6375818_6375932_6378406_6378573_6380996_6381095_6472159
H1_mix_00067183	chr4	-	1712	2	FSM	ENSG00000251580.3	ENST00000656634.1	1719	2	0	7	0	-7	multi-exon	FALSE	canonical	3	22	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTTTCCCCATGTCTTC	135	False	NA	NA	False	ATTAAA	-11	NA	6673965	6669569	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_6671000_6673683
H1_mix_00067184	chr4	-	1161	2	FSM	ENSG00000251580.3	ENST00000654965.1	1161	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAGACTTCTTGCTTGAG	151	False	NA	NA	False	AATAAA	-33	NA	6673949	6670098	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_6670994_6673683
H1_mix_00067185	chr4	-	1589	2	FSM	ENSG00000178988.11	ENST00000320848.7	1578	2	0	-11	0	11	multi-exon	FALSE	canonical	3	224	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGTTCTTCATTGAGTG	-7	True	NA	-3	True	AATAAA	-27	NA	6709865	6707689	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_6708644_6709230
H1_mix_00067186	chr4	-	1594	2	NNC	ENSG00000178988.11	novel	1578	2	NA	NA	0	11	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGTTCTTCATTGAGTG	-7	True	NA	-3	True	AATAAA	-27	NA	6709865	6707689	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_6708644_6709225
H1_mix_00067187	chr4	-	2198	1	FSM	ENSG00000178988.11	ENST00000500563.2	2127	1	-68	-3	-30	3	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGAATGGATGTTCTTC	NA	False	NA	-11	True	AATAAA	-19	NA	6709895	6707697	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_6707700_6709900
H1_mix_00067188	chr4	-	1113	1	FSM	ENSG00000287104.1	ENST00000664676.1	1111	1	0	-2	0	2	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGAGTGGATCTCATGGT	1	True	NA	-10	True	ATTAAA	-16	NA	6987036	6985923	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_6985900_6987000
H1_mix_00067189	chr4	-	2176	1	FSM	ENSG00000173013.6	ENST00000310085.6	2153	1	-23	0	-23	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTAGTCCCGAGACACT	NA	False	NA	NA	False	ATTAAA	-19	NA	7043024	7040848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_7040800_7043000
H1_mix_00067190	chr4	-	2653	4	FSM	ENSG00000109519.13	ENST00000264954.5	2653	4	0	0	0	0	multi-exon	FALSE	canonical	3	479	junction_2	14.8548533034381	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGGCCCCTCATTGACT	-4	True	NA	-1	True	AGTAAA	-25	NA	7068064	7058894	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_7061209_7062384_7062467_7064060_7064224_7067970
H1_mix_00067191	chr4	-	2195	3	FSM	ENSG00000109519.13	ENST00000504920.5	2195	3	0	0	0	0	multi-exon	FALSE	canonical	3	479	junction_1	16	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGTTTGGCTACCTGG	-4	True	NA	-22	True	AATAAA	-12	NA	7068064	7060528	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_7062467_7064060_7064224_7067970
H1_mix_00067192	chr4	-	7676	17	FSM	ENSG00000196526.11	ENST00000358461.6	7516	17	23	-183	23	182	multi-exon	TRUE	canonical	3	36	junction_9	10.7163353694255	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAAAGTAGCTTCGAGT	NA	False	NA	NA	False	NA	NA	NA	7939903	7758531	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_7763792_7768843_7769009_7772819_7773011_7774738_7774904_7778761_7778877_7786193_7786312_7793680_7793827_7800441_7800654_7809613_7809764_7816017_7816100_7819075_7819172_7838523_7838704_7843138_7843351_7855465_7855575_7868621_7868720_7871951_7872081_7939655
H1_mix_00067193	chr4	-	6325	1	FSM	ENSG00000251615.3	ENST00000505448.3	3249	1	-3085	9	-3085	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTTATTTTGGTCACC	NA	False	NA	NA	False	AATAAA	-17	NA	8361423	8355098	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_8355100_8361400
H1_mix_00067195	chr4	-	2805	17	NIC	ENSG00000087008.16	novel	2253	18	NA	NA	30	-4	combination_of_known_junctions	FALSE	canonical	3	63	junction_2	74.0083399016624	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACATGTATGATCTGTTT	18	True	NA	-9	True	NA	NA	NA	8428431	8366285	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_8367081_8370907_8370995_8374977_8375153_8381491_8381608_8389172_8389287_8389611_8389735_8392332_8392454_8394619_8394743_8396936_8397120_8399555_8399653_8405954_8406044_8410211_8410356_8414291_8414382_8414853_8414929_8415765_8416000_8416377_8416536_8428350
H1_mix_00067196	chr4	-	2453	18	NNC	ENSG00000087008.16	novel	2872	18	NA	NA	4710	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_8	88.3707979135383	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGCCGTGGGTTTTTTGAT	4712	False	NA	-25	True	AAGAAA	-24	NA	8436013	8366711	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_8367081_8370907_8370995_8373560_8373629_8374977_8375153_8381491_8381608_8389172_8389287_8389611_8389735_8392332_8392450_8394619_8394743_8396936_8397120_8399555_8399653_8405954_8406044_8410211_8410356_8414291_8414382_8414853_8414929_8415765_8416000_8416377_8416536_8435922
H1_mix_00067197	chr4	-	2869	18	NNC	ENSG00000087008.16	novel	2872	18	NA	NA	4710	-18	at_least_one_novel_splicesite	FALSE	canonical	3	186	junction_17	42.6491277388625	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCACTTTATTGGTAACA	4712	False	NA	-23	True	NA	NA	NA	8436013	8366299	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_8367081_8370907_8370995_8373560_8373629_8374977_8375153_8381491_8381608_8389172_8389287_8389611_8389735_8392332_8392454_8394619_8394743_8396936_8397120_8399555_8399653_8405954_8406044_8410211_8410356_8414291_8414382_8414853_8414929_8415765_8416000_8416377_8416536_8435922
H1_mix_00067199	chr4	-	2251	18	FSM	ENSG00000087008.16	ENST00000503233.5	2253	18	2	0	2	0	multi-exon	FALSE	canonical	3	233	junction_17	33.3929110020422	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGACTGGCACACATTCAG	7477	False	NA	NA	False	NA	NA	NA	8428484	8366960	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_8367081_8370907_8370995_8373560_8373629_8374977_8375153_8381491_8381608_8389172_8389287_8389611_8389735_8392332_8392454_8394619_8394743_8396936_8397120_8399555_8399653_8405954_8406044_8410211_8410356_8414291_8414382_8414853_8414929_8415765_8416000_8416377_8416536_8428350
H1_mix_00067200	chr4	-	1643	2	FSM	ENSG00000215612.8	ENST00000400677.5	1917	2	266	8	49	-8	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGACAGTTTCACTGC	428	False	NA	NA	False	AATAAA	-10	NA	8871573	8867055	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_8868346_8871220
H1_mix_00067203	chr4	-	5146	16	Fusion	ENSG00000261490.1_ENSG00000071127.17	novel	3142	15	NA	NA	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	469.712990381715	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTCATGTGATTAATTCT	3	True	NA	-4	True	AATAAA	-44	NA	10116868	10068088	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr4_-_10069825_10073990_10075485_10077303_10077449_10077752_10077927_10078890_10079002_10081356_10081445_10083021_10083177_10084440_10084531_10087706_10087941_10088292_10088374_10088663_10088742_10097710_10097892_10098991_10099140_10103895_10103987_10116112_10116235_10116650
H1_mix_00067204	chr4	-	2993	15	FSM	ENSG00000071127.17	ENST00000499869.7	2993	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	363.346190404733	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGGTCACTGACTTTGT	-6	True	NA	-7	True	ATTAAA	-16	NA	10116799	10074338	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_10075485_10077303_10077449_10077752_10077927_10078890_10079002_10081356_10081445_10083021_10083179_10084442_10084531_10087706_10087941_10088292_10088374_10088663_10088742_10097710_10097892_10098991_10099140_10103895_10103987_10116112_10116235_10116650
H1_mix_00067205	chr4	-	2723	12	FSM	ENSG00000071127.17	ENST00000382451.6	2722	12	0	-1	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	526.01500465668	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGGTCACTGACTTTGT	22	False	NA	-7	True	ATTAAA	-16	NA	10116949	10074338	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_10075485_10077303_10077449_10077752_10077927_10078890_10079002_10081356_10081445_10083021_10083177_10084440_10084531_10087706_10087941_10088292_10088374_10088663_10088742_10116112_10116235_10116650
H1_mix_00067206	chr4	-	3143	15	FSM	ENSG00000071127.17	ENST00000382452.6	3142	15	0	-1	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	363.346190404733	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGGTCACTGACTTTGT	22	False	NA	-7	True	ATTAAA	-16	NA	10116949	10074338	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_10075485_10077303_10077449_10077752_10077927_10078890_10079002_10081356_10081445_10083021_10083177_10084440_10084531_10087706_10087941_10088292_10088374_10088663_10088742_10097710_10097892_10098991_10099140_10103895_10103987_10116112_10116235_10116650
H1_mix_00067208	chr4	-	7151	3	NIC	ENSG00000178163.8	novel	6954	3	NA	NA	0	7	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	19.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTATGCAGGTGACTTTAT	6	True	NA	-4	True	AATAAA	-35	NA	10457405	10439872	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_10446540_10454593_10454989_10457316
H1_mix_00067209	chr4	-	6949	3	FSM	ENSG00000178163.8	ENST00000326756.4	6954	3	0	5	0	-5	multi-exon	FALSE	canonical	3	23	junction_1	16	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATTTCAAACGTTATGC	-15	True	NA	-16	True	AATAAA	-23	NA	10457426	10439884	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_10446540_10454804_10454989_10457316
H1_mix_00067212	chr4	-	4197	2	FSM	ENSG00000178163.8	ENST00000503068.1	4196	2	5	-6	0	6	multi-exon	FALSE	canonical	3	55	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATTCTTTTCTGTGTTTTC	6	True	NA	NA	False	AATAAA	-35	NA	10457405	10450880	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_10454989_10457316
H1_mix_00067214	chr4	-	7071	2	FSM	ENSG00000002587.10	ENST00000002596.6	7160	2	0	89	0	-89	multi-exon	FALSE	canonical	3	8	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGGCCCAACAAATATGAAG	-8	True	NA	NA	False	CATAAA	-8	NA	11428894	11393238	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_11400114_11428698
H1_mix_00067215	chr4	-	1552	6	FSM	ENSG00000157869.16	ENST00000508274.5	1551	6	0	-1	0	1	multi-exon	FALSE	canonical	3	19	junction_3	134.076992806372	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGGCAATTTTCTTT	-1	True	NA	-10	True	AATAAA	-15	NA	13484331	13367722	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_13368651_13376544_13376623_13381490_13381595_13474317_13474407_13479429_13479527_13484075
H1_mix_00067216	chr4	-	1691	7	FSM	ENSG00000157869.16	ENST00000330852.10	1690	7	0	-1	0	1	multi-exon	FALSE	canonical	3	262	junction_1	41.7708697007323	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGGCAATTTTCTTT	-10	True	NA	-10	True	AATAAA	-15	NA	13484340	13367722	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_13368651_13376544_13376623_13381490_13381595_13460698_13460829_13474317_13474407_13479429_13479527_13484075
H1_mix_00067217	chr4	-	1786	8	FSM	ENSG00000157869.16	ENST00000288723.9	1785	8	0	-1	0	1	multi-exon	FALSE	canonical	3	104	junction_1	112.979138403007	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGGCAATTTTCTTT	-10	True	NA	-10	True	AATAAA	-15	NA	13484340	13367722	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_13368651_13369870_13369966_13376544_13376623_13381490_13381595_13460698_13460829_13474317_13474407_13479429_13479527_13484075
H1_mix_00067218	chr4	-	1778	8	FSM	ENSG00000157869.16	ENST00000338176.8	1787	8	11	-2	11	1	multi-exon	FALSE	canonical	2	3	junction_1	158.384188037847	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGGCAATTTTCTTT	622	False	NA	-10	True	AATAAA	-15	NA	13484354	13367722	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_13368651_13371794_13371868_13376544_13376623_13381490_13381595_13460698_13460829_13474317_13474407_13479429_13479527_13484075
H1_mix_00067219	chr4	-	10573	26	FSM	ENSG00000038219.13	ENST00000040738.10	10567	26	0	-6	0	6	multi-exon	FALSE	canonical	3	42	junction_24	35.0765106588441	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAAGAATTTTATTTGTG	-29	True	NA	-13	True	TATAAA	-27	NA	13627725	13568731	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_13570129_13576837_13576992_13577402_13577488_13577581_13577632_13579927_13579974_13581019_13581055_13581131_13581208_13582236_13582311_13582651_13582737_13586395_13586476_13587698_13587772_13588721_13588793_13590385_13590447_13591922_13591967_13595859_13595945_13597103_13597169_13598945_13605085_13607116_13607190_13608529_13608669_13609294_13609407_13610933_13611101_13613511_13613662_13614195_13614811_13615311_13615503_13619942_13620068_13627344
H1_mix_00067221	chr4	-	1130	4	FSM	ENSG00000038219.13	ENST00000505343.1	1202	4	72	0	72	0	multi-exon	FALSE	canonical	3	98	junction_1	24.5673676969177	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCTGAACTCAAAACAAAGT	NA	False	NA	NA	False	GATAAA	-21	NA	13578129	13569785	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_13570129_13576837_13576992_13577402_13577488_13577581
H1_mix_00067222	chr4	-	395	1	FSM	ENSG00000273133.1	ENST00000609724.1	556	1	200	-39	200	39	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCTTTGCAAGAACCCT	NA	False	NA	NA	False	NA	NA	NA	15564053	15563658	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_15563700_15564100
H1_mix_00067223	chr4	-	3488	11	FSM	ENSG00000118564.15	ENST00000341285.8	3488	11	0	0	0	0	multi-exon	FALSE	canonical	3	509	junction_9	31.8447797919847	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATGTATGTTCTGATTG	-14	True	NA	NA	False	GATAAA	-1	NA	15655357	15604380	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_15605800_15612265_15612415_15625251_15625978_15626872_15626956_15627884_15628034_15630665_15630792_15636493_15636677_15638507_15638695_15640787_15640884_15644492_15644709_15655203
H1_mix_00067224	chr4	-	2837	11	FSM	ENSG00000118564.15	ENST00000412094.6	2837	11	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_10	149.142381635805	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTTGTGTTGTGATTTT	-39	True	NA	-1	True	AATAAA	-28	NA	15655382	15605005	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_15605800_15612265_15612415_15625251_15625978_15626872_15626956_15627884_15628034_15630665_15630792_15636493_15636677_15638507_15638695_15640787_15640884_15644492_15644658_15655203
H1_mix_00067226	chr4	-	786	2	NNC	ENSG00000118564.15	novel	591	3	NA	NA	-17	-7829	at_least_one_novel_splicesite	FALSE	canonical	3	371	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTGCCTGTGATCTGTG	32	False	15681616	-2	True	ATTAAA	-22	NA	15681584	15667559	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_15668041_15681279
H1_mix_00067227	chr4	-	705	2	NNC	ENSG00000118564.15	novel	532	4	NA	NA	-9	-7829	at_least_one_novel_splicesite	FALSE	canonical	3	126	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTGCCTGTGATCTGTG	-27	True	NA	-2	True	ATTAAA	-22	NA	15681576	15667559	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_15668041_15681352
H1_mix_00067228	chr4	-	2919	2	FSM	ENSG00000007062.12	ENST00000513448.5	2042	2	-872	-5	-872	3	multi-exon	FALSE	canonical	3	269	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTATGTTACTTCCTTGA	NA	False	NA	0	True	AATAAA	-21	NA	15972817	15968224	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_15969369_15971042
H1_mix_00067229	chr4	-	4115	27	FSM	ENSG00000007062.12	ENST00000508167.5	4014	27	-100	-1	-100	-1	multi-exon	FALSE	canonical	3	41	junction_26	42.5147555311073	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTCTGTATGTTACTTCC	314	False	NA	-4	True	AATAAA	-17	NA	16083832	15968228	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_15969369_15971042_15971083_15979394_15979464_15979880_15979905_15980421_15980538_15984262_15984356_15985759_15985829_15985956_15986038_15987662_15987717_15989731_15989825_15991221_15991294_15992247_15992392_15993986_15994072_15998384_15998489_16000495_16000620_16006537_16006691_16008948_16009109_16013274_16013339_16016165_16016241_16018322_16018541_16023325_16023416_16024294_16024359_16025191_16025313_16033303_16033510_16038945_16039002_16075686_16076119_16083664
H1_mix_00067230	chr4	-	4352	27	FSM	ENSG00000007062.12	ENST00000505450.5	4349	27	0	-3	0	3	multi-exon	TRUE	canonical	3	140	junction_26	28.9711139548859	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTATGTTACTTCCTTGA	NA	False	NA	0	True	AATAAA	-21	NA	16084378	15968224	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_15969369_15971042_15971083_15979394_15979464_15979880_15979905_15980421_15980538_15984262_15984356_15985759_15985829_15985956_15986038_15987662_15987717_15989731_15989825_15991221_15991294_15992247_15992392_15993986_15994072_15998384_15998489_16000495_16000620_16006537_16006691_16008948_16009109_16013274_16013339_16016165_16016241_16018322_16018541_16023325_16023416_16024294_16024359_16025191_16025313_16033303_16033510_16038945_16039002_16075686_16076119_16083977
H1_mix_00067231	chr4	-	3927	27	FSM	ENSG00000007062.12	ENST00000513946.2	3927	27	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_25	77.3394500403538	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCATTTGAATAAAAAGGAAC	-3	True	NA	-33	True	NA	NA	NA	16083704	15968257	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_15969369_15971042_15971083_15979394_15979464_15979880_15979905_15980276_15980302_15980421_15980538_15984262_15984356_15985759_15985829_15985956_15986038_15987662_15987717_15989731_15989825_15991221_15991294_15992247_15992392_15993986_15994072_15998384_15998489_16000495_16000620_16006537_16006691_16008948_16009109_16013274_16013339_16016165_16016241_16018322_16018541_16023325_16023416_16024294_16024359_16025191_16025313_16033303_16033510_16075686_16076119_16083664
H1_mix_00067235	chr4	-	4424	14	FSM	ENSG00000169762.17	ENST00000405303.7	4521	14	0	97	0	-97	multi-exon	TRUE	canonical	3	34	junction_8	10.1258354904027	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCGATGAAATAATGTCT	1	True	NA	NA	False	NA	NA	NA	16226471	16160601	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_16163538_16166632_16166794_16170652_16170730_16174203_16174273_16174669_16174730_16176118_16176229_16179576_16179658_16186534_16186605_16186780_16186879_16188219_16188356_16191360_16191524_16202461_16202581_16213767_16213899_16226258
H1_mix_00067238	chr4	-	2304	8	FSM	ENSG00000169744.13	ENST00000515064.5	2295	8	0	-9	0	9	multi-exon	FALSE	canonical	3	32	junction_1	42.1832735978204	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTATTTGTGTGAGTA	4	True	NA	-4	True	AATAAA	-27	NA	16898562	16501531	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_16502874_16508540_16508687_16511980_16512105_16585921_16586006_16588709_16588833_16595702_16595876_16759157_16759261_16898353
H1_mix_00067239	chr4	-	2485	9	FSM	ENSG00000169744.13	ENST00000441778.6	2476	9	0	-9	0	9	multi-exon	FALSE	canonical	3	29	junction_2	48.8964147458686	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTATTTGTGTGAGTA	341	False	NA	-4	True	AATAAA	-27	NA	16898594	16501531	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_16502874_16505839_16505983_16508534_16508687_16511980_16512105_16585921_16586006_16588709_16588833_16595702_16595876_16759157_16759261_16898353
H1_mix_00067240	chr4	-	2381	8	NIC	ENSG00000169744.13	novel	2384	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	43	junction_2	42.8999785928304	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTGAATCTGGCTATTT	11	True	NA	-13	True	AATAAA	-18	NA	16898645	16501540	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_16502874_16508534_16508684_16511980_16512105_16585921_16586006_16588709_16588833_16595702_16595876_16759157_16759261_16898353
H1_mix_00067241	chr4	-	2393	8	FSM	ENSG00000169744.13	ENST00000304523.10	2384	8	0	-9	0	9	multi-exon	FALSE	canonical	3	70	junction_1	30.9416831329849	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTATTTGTGTGAGTA	11	True	NA	-4	True	AATAAA	-27	NA	16898645	16501531	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_16502874_16508534_16508687_16511980_16512105_16585921_16586006_16588709_16588833_16595702_16595876_16759157_16759261_16898353
H1_mix_00067242	chr4	-	246	2	Intergenic	novelGene_1012	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCAGGGAAGGGAGATAAG	NA	False	NA	NA	False	NA	NA	NA	16998346	16975221	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_-_16975318_16998196
H1_mix_00067243	chr4	-	1507	7	FSM	ENSG00000151552.12	ENST00000281243.10	1507	7	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_4	33.4265363645911	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGGCCTGATTCTGCCTT	-2	True	NA	-3	True	AATAAA	-17	NA	17512090	17486394	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_17487237_17490661_17490746_17492231_17492341_17501718_17501860_17504378_17504476_17509270_17509364_17511949
H1_mix_00067244	chr4	-	1278	6	FSM	ENSG00000151552.12	ENST00000428702.6	1278	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	177.018191155598	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAAATCACATCTTATAT	2	True	NA	-16	True	AATAAA	-24	NA	17512086	17486526	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_17487237_17490661_17490746_17492231_17492341_17501718_17501860_17504378_17504476_17511949
H1_mix_00067246	chr4	-	3228	7	ISM	ENSG00000047662.5	ENST00000265018.4	6731	18	133795	1025	133795	-1025	3prime_fragment	FALSE	canonical	1	1	junction_3	1.88561808316413	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTCTTAATACTATTACAT	5335	False	NA	NA	False	NA	NA	NA	17647826	17630330	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_17632626_17633688_17633889_17635008_17635114_17636527_17636646_17639249_17639397_17642055_17642229_17647636
H1_mix_00067248	chr4	-	4486	3	NIC	ENSG00000163257.11	novel	4547	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	25	junction_1	13	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTATGGTCATTTGTCC	17	True	NA	0	True	AATAAA	-24	NA	17810711	17800654	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_17804757_17805106_17805226_17810446
H1_mix_00067249	chr4	-	4547	3	FSM	ENSG00000163257.11	ENST00000382247.6	4547	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	12	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTATGGTCATTTGTCC	-29	True	NA	0	True	AATAAA	-24	NA	17810757	17800654	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_17804772_17805106_17805226_17810446
H1_mix_00067251	chr4	-	1342	2	FSM	ENSG00000163257.11	ENST00000507731.1	533	2	0	-809	0	809	multi-exon	FALSE	canonical	3	13	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTTTTGTTTTAATG	17	True	NA	NA	False	NA	NA	NA	17810711	17808615	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_17809693_17810446
H1_mix_00067252	chr4	-	5604	7	FSM	ENSG00000178177.16	ENST00000326877.8	5604	7	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	48.7399562303182	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAATTTCAGATTTTTT	NA	False	NA	-23	True	AATAAA	-13	NA	18021876	17841198	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_17845902_17886067_17886162_17909093_17909346_17961902_17962033_17962969_17963050_17972819_17972886_18021597
H1_mix_00067253	chr4	-	721	5	NIC	ENSG00000178177.16	novel	5604	7	NA	NA	11	48	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	76.5669641555678	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTTGATTATATTCTTT	12	True	NA	31	True	ATTAAA	-14	NA	18021732	17845591	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_17845902_17961902_17962033_17962969_17963050_17972819_17972886_18021597
H1_mix_00067255	chr4	-	6497	7	NIC	ENSG00000178177.16	novel	5009	7	NA	NA	15	1590	combination_of_known_junctions	FALSE	canonical	3	11	junction_6	61.053027952938	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTAAATATATTTTATTC	16	True	NA	NA	False	ATTAAA	-21	NA	18021728	17879004	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_17884753_17886067_17886162_17909093_17909346_17961902_17962033_17962969_17963050_17972819_17972886_18021601
H1_mix_00067257	chr4	-	4111	6	FSM	ENSG00000178177.16	ENST00000674942.1	1978	6	-147	-1986	-26	1986	multi-exon	FALSE	canonical	3	13	junction_1	63.5641408342786	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTCACTTAATCCTGAAG	NA	False	NA	NA	False	AATAAA	-10	NA	18021902	17890305	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_17893584_17909093_17909346_17961902_17962033_17962969_17963050_17972819_17972886_18021597
H1_mix_00067259	chr4	-	3992	3	FSM	ENSG00000152990.14	ENST00000499527.6	3968	3	0	-24	0	0	multi-exon	FALSE	canonical	3	319	junction_2	44	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTTATTTTTATATTT	NA	False	NA	-1	True	AATAAA	-21	NA	22394868	22387375	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_22388948_22389087_22389184_22392544
H1_mix_00067261	chr4	-	2870	12	FSM	ENSG00000152990.14	ENST00000502482.1	2870	12	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_8	31.1355341628067	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTGTATTTTTGTATACT	48	False	NA	NA	False	AATAAA	-20	NA	22515997	22420037	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_22421090_22424190_22424353_22435310_22435467_22436439_22436642_22438255_22438421_22442649_22442864_22444972_22445134_22447439_22447512_22454865_22454938_22461736_22461809_22473771_22473844_22515527
H1_mix_00067264	chr4	-	1330	1	Genic_Genomic	ENSG00000251292.1	novel	NA	NA	NA	NA	9040	52	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCTTAGCTGATGACATT	9025	False	NA	NA	False	NA	NA	NA	23724539	23723209	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr4_-_23723200_23724500
H1_mix_00067265	chr4	-	267	1	NIC	ENSG00000251292.1	novel	639	4	NA	NA	6277	-3774	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACATTTCAAGGGTGTCAG	6262	False	NA	NA	False	NA	NA	NA	23727302	23727035	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_23727000_23727300
H1_mix_00067266	chr4	-	6186	13	FSM	ENSG00000109819.9	ENST00000264867.7	6288	13	92	10	74	-10	multi-exon	FALSE	canonical	1	2	junction_12	7.14677471933241	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAATCTACTTCTGCTTT	140	False	NA	-9	True	AATAAA	-14	NA	23889955	23792030	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_23795926_23801729_23801882_23802223_23802346_23812746_23812868_23813020_23813126_23813689_23814606_23824279_23824354_23824462_23824509_23828399_23828605_23829462_23829586_23831556_23831752_23884751_23884932_23889903
H1_mix_00067267	chr4	-	2550	13	FSM	ENSG00000109819.9	ENST00000506055.5	2627	13	77	0	74	0	multi-exon	FALSE	canonical	1	2	junction_12	7.56453714527348	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAACAAAACAACAACAAT	140	False	NA	NA	False	NA	NA	NA	23889955	23795697	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_23795926_23801729_23801882_23802223_23802346_23812746_23812868_23813020_23813126_23813689_23814606_23824279_23824385_23824462_23824509_23828399_23828605_23829462_23829586_23831556_23831752_23884751_23884932_23889903
H1_mix_00067268	chr4	-	6104	1	FSM	ENSG00000207697.1	ENST00000384964.1	99	1	-3241	-2764	-3241	2764	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTAGTTGTGTTATTTT	NA	False	NA	0	True	ATTAAA	-24	NA	24523531	24517427	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_24517400_24523500
H1_mix_00067269	chr4	-	1850	2	FSM	ENSG00000109606.13	ENST00000513036.5	1848	2	0	-2	0	0	multi-exon	FALSE	canonical	3	1323	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGCCAAAGCCCTTTGG	NA	False	NA	-28	True	AATAAA	-16	NA	24530883	24527474	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_24528042_24529600
H1_mix_00067270	chr4	-	3041	4	FSM	ENSG00000109606.13	ENST00000508032.5	3028	4	0	-13	0	13	multi-exon	FALSE	canonical	3	1243	junction_3	43.2049379893857	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGGTATCTTTGTTCTA	NA	False	NA	-15	True	AATAAA	-29	NA	24539150	24527461	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_24528042_24529600_24529771_24532863_24533055_24537050
H1_mix_00067271	chr4	-	2998	14	FSM	ENSG00000109606.13	ENST00000336812.5	2998	14	0	0	0	0	multi-exon	FALSE	canonical	3	1104	junction_5	93.1059077565521	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGCCAAAGCCCTTTGG	-13	True	NA	-28	True	AATAAA	-16	NA	24584554	24527474	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_24528042_24529600_24529771_24532863_24533055_24537050_24537174_24540107_24540300_24540839_24540949_24541872_24542023_24542939_24543027_24548854_24549023_24554724_24554944_24556250_24556411_24570653_24570848_24576242_24576679_24584322
H1_mix_00067275	chr4	-	5509	11	FSM	ENSG00000109618.13	ENST00000382103.7	5503	11	0	-6	0	6	multi-exon	FALSE	canonical	3	25	junction_10	6.72606868832009	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACGTTATTTTACCTAATC	127	False	25160476	-2	True	AATAAA	-21	NA	25160449	25120007	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_25124226_25125693_25125785_25127263_25127358_25144773_25144866_25145003_25145134_25151959_25152063_25154997_25155152_25156036_25156196_25156855_25156975_25158952_25159108_25160255
H1_mix_00067277	chr4	-	4553	24	FSM	ENSG00000091490.11	ENST00000399878.8	4543	24	0	-10	0	10	multi-exon	TRUE	canonical	3	308	junction_16	28.2249939513523	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTTTTTTCCCCTTTT	1	True	NA	3	True	AATAAA	-30	NA	25862988	25747422	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_25748565_25757533_25757607_25757687_25757791_25758940_25759069_25765325_25765436_25767524_25767610_25767739_25767831_25776276_25776361_25779075_25779204_25782241_25782419_25784227_25784291_25788223_25788365_25790454_25790575_25802282_25802463_25804540_25804753_25818137_25818279_25819807_25819941_25821995_25822129_25830097_25830157_25832994_25833111_25833447_25833570_25835196_25835324_25847293_25847865_25862674
H1_mix_00067278	chr4	-	436	2	Antisense	novelGene_ENSG00000168214.22_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	22	junction_1	0	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAGGTAATTTGTTACT	NA	False	NA	0	True	AATAAA	-28	NA	26299136	26288152	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_-_26288450_26298997
H1_mix_00067281	chr4	-	1239	7	FSM	ENSG00000181826.10	ENST00000314117.8	1326	7	58	29	58	-29	multi-exon	FALSE	canonical	2	2	junction_1	4.34613493680177	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCATTAAAGCAGATGCT	58	False	NA	NA	False	NA	NA	NA	37686318	37590828	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_37591218_37631384_37631524_37634886_37635124_37638446_37638505_37647367_37647440_37649275_37649501_37686199
H1_mix_00067283	chr4	-	3593	7	FSM	ENSG00000181826.10	ENST00000454158.7	3617	7	21	3	21	-3	multi-exon	FALSE	canonical	2	7	junction_1	2.91070819942883	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTGTGTTGTCTTGTGGG	21	False	NA	-6	True	AATAAA	-11	NA	37686355	37610636	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_37613343_37631384_37631524_37634886_37635124_37638446_37638505_37647367_37647440_37649275_37649501_37686199
H1_mix_00067287	chr4	-	4871	25	FSM	ENSG00000035928.17	ENST00000349703.7	4870	25	0	-1	0	1	multi-exon	FALSE	canonical	3	179	junction_12	39.1341842255591	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGAGTCACGACCCTGT	2	True	NA	-6	True	AATAAA	-20	NA	39366362	39287454	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_39288845_39289847_39290040_39291638_39291853_39295613_39295760_39300020_39300139_39300259_39300415_39302277_39302377_39302499_39302596_39302736_39302875_39303059_39303152_39304813_39304929_39306591_39306702_39308635_39309033_39311444_39311550_39312751_39312932_39316914_39317023_39320382_39320670_39321286_39321375_39323339_39323418_39326562_39326641_39327523_39327757_39342344_39342468_39345400_39345477_39351347_39351477_39366238
H1_mix_00067288	chr4	-	4887	25	FSM	ENSG00000035928.17	ENST00000381897.5	4886	25	0	-1	0	1	multi-exon	FALSE	canonical	3	90	junction_12	51.7984207180961	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGAGTCACGACCCTGT	-11	True	NA	-6	True	AATAAA	-20	NA	39366375	39287454	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_39288845_39289847_39290040_39291638_39291853_39295613_39295760_39300020_39300139_39300259_39300415_39302277_39302377_39302499_39302596_39302736_39302875_39303059_39303152_39304813_39304929_39306591_39306705_39308635_39309033_39311444_39311550_39312751_39312932_39316914_39317023_39320382_39320670_39321286_39321375_39323339_39323418_39326562_39326641_39327523_39327757_39342344_39342468_39345400_39345477_39351347_39351477_39366238
H1_mix_00067290	chr4	-	2420	8	FSM	ENSG00000163682.17	ENST00000645496.2	2420	8	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_7	2730.76545297901	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTTGACCACCGTATTAA	4	True	NA	-72	True	NA	NA	NA	39458923	39452586	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_39454226_39454532_39454650_39454863_39454945_39456405_39456539_39457585_39457682_39458193_39458310_39458393_39458599_39458890
H1_mix_00067291	chr4	-	724	8	FSM	ENSG00000163682.17	ENST00000295955.14	724	8	0	0	0	0	multi-exon	FALSE	canonical	3	4712	junction_7	1325.20159421355	3003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGTTATCCTTTTTAGCTA	5	True	NA	-6	True	AATAAA	-31	NA	39458922	39454123	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_39454226_39454532_39454650_39454863_39454945_39456405_39456539_39457585_39457682_39458193_39458310_39458393_39458441_39458890
H1_mix_00067292	chr4	-	619	3	FSM	ENSG00000163682.17	ENST00000511643.6	619	3	0	0	0	0	multi-exon	FALSE	canonical	3	6708	junction_1	830.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCTTCTTAAACCGGTTA	3651	False	NA	-19	True	AATAAA	-18	NA	39455276	39454136	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_39454226_39454532_39454650_39454863
H1_mix_00067293	chr4	-	1127	7	FSM	ENSG00000163682.17	ENST00000449470.6	1127	7	0	0	0	0	multi-exon	FALSE	canonical	3	5878	junction_3	980.516360563827	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCTTCTTAAACCGGTTA	-5	True	NA	-19	True	AATAAA	-18	NA	39458888	39454136	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_39454226_39454532_39454650_39454863_39454945_39456405_39456539_39457585_39457682_39458193_39458310_39458393
H1_mix_00067294	chr4	-	1028	5	FSM	ENSG00000163682.17	ENST00000511075.5	1028	5	0	0	0	0	multi-exon	FALSE	canonical	3	4712	junction_4	1502.59631554852	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAGCTTTAAAAAAAATTT	-4	True	NA	NA	False	AGTAAA	-4	NA	39458931	39455810	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_39456539_39457585_39457682_39458193_39458310_39458393_39458441_39458890
H1_mix_00067296	chr4	-	2834	11	FSM	ENSG00000109814.12	ENST00000501493.6	2826	11	0	-8	0	0	multi-exon	FALSE	canonical	3	17	junction_8	344.615495879103	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGGTGTAATTTTTGTCA	1	True	NA	0	True	AATAAA	-21	NA	39527437	39498754	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_39500254_39503874_39503986_39504416_39504509_39505236_39505371_39505617_39505749_39508565_39508661_39509759_39509908_39510352_39510551_39514082_39514185_39521350_39521520_39527282
H1_mix_00067301	chr4	-	6506	5	FSM	ENSG00000163683.12	ENST00000295958.10	6252	5	-28	-226	0	226	multi-exon	FALSE	canonical	3	416	junction_1	60.6315718087532	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACATAGTATCACTCTGT	193	False	NA	NA	False	NA	NA	NA	39638893	39546109	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_39552159_39556427_39556571_39572414_39572464_39605070_39605181_39638738
H1_mix_00067302	chr4	-	2375	6	NNC	ENSG00000163683.12	novel	6252	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	207.318498933404	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGATTTTCCAAAATAATT	-1	True	NA	NA	False	NA	NA	NA	39638865	39547835	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_39548204_39550580_39552159_39556427_39556571_39572414_39572464_39605070_39605181_39638738
H1_mix_00067306	chr4	-	4217	4	FSM	ENSG00000121892.15	ENST00000507766.1	4196	4	0	-21	0	21	multi-exon	FALSE	canonical	1	147	junction_2	134.494113873681	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAAATGCAAAAAGTTAGC	876	False	NA	NA	False	ACTAAA	-19	NA	39848561	39836990	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_39838209_39841947_39842057_39844655_39844802_39845817
H1_mix_00067307	chr4	-	2708	16	FSM	ENSG00000121892.15	ENST00000503396.5	2685	16	0	-23	0	23	multi-exon	FALSE	canonical	3	379	junction_12	44.988887516808	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTAAATTCCTATCTAGA	7	False	NA	22	True	AATAAA	-45	NA	39977956	39897990	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_39898529_39898776_39898826_39900425_39900508_39902346_39902461_39904039_39904192_39908394_39908541_39910243_39910339_39913610_39913727_39917047_39917189_39920318_39920400_39922621_39922749_39925835_39925934_39926774_39926862_39927960_39928165_39976439_39976618_39977456
H1_mix_00067311	chr4	-	4751	7	NNC	ENSG00000163694.15	novel	5114	7	NA	NA	36	1665	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	147.659142020473	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTACACTCAAGACTCCTT	1	True	NA	NA	False	NA	NA	NA	40630750	40421601	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_40421627_40423279_40426144_40432650_40432863_40437770_40438925_40466576_40466700_40544421_40544507_40630462
H1_mix_00067312	chr4	-	5114	7	FSM	ENSG00000163694.15	ENST00000295971.12	5114	7	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_6	72.2213034129589	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCAAGACCTTATTTTAAA	-7	True	NA	-17	True	AATAAA	-17	NA	40629864	40423279	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_40426144_40432650_40432863_40436440_40436648_40437770_40438925_40466576_40466700_40544421_40544507_40629395
H1_mix_00067313	chr4	-	4880	7	NNC	ENSG00000163694.15	novel	5114	7	NA	NA	-77	0	at_least_one_novel_splicesite	FALSE	canonical	3	117	junction_3	97.9190425243675	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCAAGACCTTATTTTAAA	3	True	NA	-17	True	AATAAA	-17	NA	40630700	40423279	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_40426144_40432650_40432863_40436440_40436645_40437770_40438925_40466576_40466700_40544421_40544507_40630462
H1_mix_00067314	chr4	-	4940	7	NIC	ENSG00000163694.15	novel	5114	7	NA	NA	35	6	combination_of_known_junctions	FALSE	canonical	3	164	junction_6	73.403943278879	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTTATTTTAAATTGTGT	0	True	NA	-11	True	AATAAA	-23	NA	40630751	40423273	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_40426144_40432650_40432863_40436440_40436648_40437770_40438925_40466576_40466700_40544421_40544507_40630462
H1_mix_00067315	chr4	-	4863	8	NIC	ENSG00000163694.15	novel	5114	7	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_7	116.051536757052	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCAAGACCTTATTTTAAA	6	True	NA	-17	True	AATAAA	-17	NA	40630837	40423279	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_40426144_40432650_40432863_40436440_40436648_40437770_40438925_40466576_40466700_40544421_40544507_40630462_40630622_40630778
H1_mix_00067316	chr4	-	4868	8	NNC	ENSG00000163694.15	novel	5114	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_7	126.022511756383	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCAAGACCTTATTTTAAA	-2	True	NA	-17	True	AATAAA	-17	NA	40630845	40423279	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_40426144_40432650_40432863_40436440_40436645_40437770_40438925_40466576_40466700_40544421_40544507_40630462_40630622_40630778
H1_mix_00067320	chr4	-	8972	18	FSM	ENSG00000163697.17	ENST00000295974.12	8972	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	99.9181672090131	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATATGTCTATGAATGTT	-7	True	NA	-2	True	AATAAA	-20	NA	41214618	40810026	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_40816260_40821870_40822051_40823643_40823760_40825886_40825971_40827131_40827220_40830462_40830578_40890363_40890492_40893264_40893412_40934455_40934517_40934613_40934700_40935076_40935140_40944864_40945071_41013582_41014399_41033235_41033305_41065575_41065674_41100638_41100751_41142986_41143143_41214404
H1_mix_00067321	chr4	-	8899	18	FSM	ENSG00000163697.17	ENST00000508593.6	8899	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	99.7556530298844	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATATGTCTATGAATGTT	0	True	NA	-2	True	AATAAA	-20	NA	41214542	40810026	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_40816260_40821870_40822051_40823643_40823760_40825886_40825971_40827131_40827220_40830462_40830578_40890363_40890492_40893264_40893412_40934455_40934517_40934613_40934700_40935076_40935140_40944864_40945074_41013582_41014399_41033235_41033305_41065575_41065674_41100638_41100751_41142986_41143143_41214404
H1_mix_00067323	chr4	-	4166	17	FSM	ENSG00000163697.17	ENST00000513140.5	4166	17	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	94.615009380119	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGCTATGTACTTGTCAA	3	True	NA	NA	False	TATAAA	-21	NA	41214458	40814606	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_40816260_40821870_40822051_40823643_40823760_40825886_40825968_40827131_40827220_40830462_40830578_40890363_40890492_40893264_40893412_40934455_40934517_40934613_40934700_40944864_40945071_41013582_41014399_41033235_41033305_41065575_41065674_41100638_41100751_41142986_41143143_41214404
H1_mix_00067324	chr4	-	4702	7	FSM	ENSG00000163697.17	ENST00000502841.5	1681	7	0	-3021	0	-2284	multi-exon	FALSE	canonical	3	151	junction_6	49.9357921067978	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATAAAACGTTCGGCTCA	-14	True	NA	NA	False	AATAAA	-7	NA	40857155	40812311	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_40816260_40821870_40822051_40823643_40823760_40825886_40825971_40827131_40827220_40830462_40830578_40856984
H1_mix_00067330	chr4	-	500	1	FSM	ENSG00000272862.1	ENST00000608029.1	497	1	0	-3	0	3	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCAGTTGTCTTGGTAT	NA	False	NA	NA	False	AATAAA	-27	NA	41989237	41988737	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_41988700_41989200
H1_mix_00067331	chr4	-	8629	6	FSM	ENSG00000188848.17	ENST00000502486.6	8627	6	0	-2	0	2	multi-exon	TRUE	canonical	2	9	junction_1	39.7713464695376	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGAGTTTTGCTTGTCTCT	-1	True	NA	3	True	AATACA	-22	NA	42152655	42110850	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_42117736_42120053_42120295_42125582_42125675_42143427_42143995_42151656_42152377_42152531
H1_mix_00067332	chr4	-	8745	6	FSM	ENSG00000188848.17	ENST00000504360.5	8692	6	33	-86	33	-1	multi-exon	FALSE	canonical	3	9	junction_5	34.4766587708264	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAAGAGTTTTGCTTGTC	NA	False	NA	0	True	AATACA	-19	NA	42152845	42110853	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_42117736_42120124_42120295_42125582_42125675_42143427_42143995_42151656_42152377_42152531
H1_mix_00067333	chr4	-	3912	5	ISM	ENSG00000188848.17	ENST00000502486.6	8627	6	0	7033	0	-6946	5prime_fragment	FALSE	canonical	3	9	junction_4	35.3721288587498	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGACATCATCATGGCATT	-1	True	NA	NA	False	AATAAA	-13	NA	42152655	42117885	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_42120295_42125582_42125675_42143427_42143995_42151656_42152377_42152531
H1_mix_00067335	chr4	-	8259	36	FSM	ENSG00000124406.16	ENST00000264449.14	8209	36	-46	-4	-34	0	multi-exon	FALSE	canonical	3	19	junction_22	5.99686993185544	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGAAGTTTTGATTGCT	-25	True	NA	-3	True	AATAAA	-19	NA	42657139	42408372	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_42413014_42414626_42414719_42422806_42422900_42423616_42423706_42443564_42443673_42444577_42444635_42446582_42446645_42451980_42452060_42455296_42455420_42455524_42455600_42464689_42464801_42464892_42465077_42485495_42485669_42503449_42503515_42507015_42507155_42522159_42522300_42524762_42524848_42543916_42543987_42549012_42549063_42551197_42551281_42552504_42552611_42555967_42556041_42574618_42574708_42575621_42575700_42578259_42578388_42579812_42579979_42581620_42581733_42586348_42586477_42588259_42588330_42594288_42594363_42600477_42600519_42616032_42616079_42624535_42624635_42625613_42625714_42626994_42627110_42656824
H1_mix_00067336	chr4	-	2235	7	FSM	ENSG00000163281.12	ENST00000295448.8	2235	7	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_1	15.0296004234607	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCCTTATAAATGTTTTT	12	True	NA	NA	False	NA	NA	NA	44726556	44701794	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_44703143_44707751_44707927_44710952_44711138_44717112_44717296_44718308_44718411_44722083_44722243_44726473
H1_mix_00067337	chr4	-	5382	6	FSM	ENSG00000163281.12	ENST00000509756.1	5382	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	10.8185026690388	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGGCTTACTGTGTCTT	23	True	NA	NA	False	AATAAA	-25	NA	44726545	44703245	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_44707927_44710952_44711138_44717112_44717296_44718308_44718411_44722083_44722243_44726473
H1_mix_00067338	chr4	-	952	1	FSM	ENSG00000249936.3	ENST00000511164.1	579	1	-200	-173	-200	173	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTATTTATGATAAACCCAA	4	True	NA	NA	False	CATAAA	-31	NA	46724608	46723656	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_46723700_46724600
H1_mix_00067339	chr4	-	1461	5	FSM	ENSG00000169019.11	ENST00000381571.6	1461	5	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_3	21.1113121335458	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTTGTTTTATTTTTAT	-23	True	NA	66	True	AATGAA	-3	NA	47463702	47450786	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_47451666_47453058_47453215_47456576_47456730_47460143_47460300_47463585
H1_mix_00067340	chr4	-	1393	5	NNC	ENSG00000169019.11	novel	1461	5	NA	NA	19	-6	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_2	77.7206536256612	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAAGTGTCTTGTTTTAT	9578	False	NA	60	True	NA	NA	NA	47463646	47450792	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_47451666_47453058_47453215_47456582_47456730_47460143_47460300_47463585
H1_mix_00067342	chr4	-	10819	23	FSM	ENSG00000259959.1_ENSG00000170448.12	ENST00000329043.7	3723	23	15	-7111	15	0	multi-exon	FALSE	canonical	3	12	junction_22	23.110764548507	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGTTTCTTTTTGTAAA	NA	False	NA	-8	True	AATAAA	-16	NA	47914652	47840121	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_47848337_47851094_47851149_47851855_47851943_47855058_47855164_47862845_47862916_47875126_47875294_47878524_47878666_47879095_47879118_47884345_47884438_47885497_47885658_47885878_47886000_47890612_47890704_47894179_47894303_47896522_47896648_47897966_47898082_47898756_47898858_47898958_47899121_47899369_47899549_47903192_47903324_47905236_47905347_47910823_47910995_47913968_47914206_47914612
H1_mix_00067343	chr4	-	11116	23	FSM	ENSG00000259959.1_ENSG00000170448.12	ENST00000507489.2	3880	23	-114	-7122	-30	4	multi-exon	FALSE	canonical	2	3	junction_22	24.8107298169479	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTCTTTTTGTAAAATTA	NA	False	NA	-4	True	AATAAA	-20	NA	47914697	47840117	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_47848337_47851094_47851149_47851855_47851943_47855058_47855164_47862845_47862916_47875126_47875294_47878524_47878666_47879095_47879118_47884345_47884438_47885497_47885658_47885878_47886000_47890612_47890704_47894179_47894303_47896522_47896648_47897966_47898082_47898756_47898858_47898958_47899121_47899369_47899549_47903192_47903324_47905236_47905347_47910823_47910995_47913968_47914206_47914364
H1_mix_00067344	chr4	-	10931	23	FSM	ENSG00000259959.1_ENSG00000170448.12	ENST00000381538.7	3728	23	-81	-7122	-30	4	multi-exon	FALSE	canonical	3	46	junction_22	17.0230762192661	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTCTTTTTGTAAAATTA	NA	False	NA	-4	True	AATAAA	-20	NA	47914697	47840117	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_47848337_47851094_47851149_47851855_47851943_47855058_47855164_47862845_47862916_47875126_47875294_47878524_47878666_47879095_47879118_47884345_47884438_47885497_47885658_47885878_47886000_47890612_47890704_47894179_47894303_47896522_47896648_47897966_47898082_47898756_47898858_47898958_47899121_47899369_47899549_47903192_47903324_47905236_47905347_47910823_47910995_47913968_47914206_47914549
H1_mix_00067345	chr4	-	4496	3	ISM	ENSG00000170448.12	ENST00000502448.5	1760	7	23504	0	-2992	0	intron_retention	FALSE	canonical	3	105	junction_2	8.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTAATCTAGAATATTTA	243	False	NA	3	True	ATTAAA	-16	NA	47855200	47847239	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_47848337_47851094_47851149_47851855
H1_mix_00067346	chr4	-	3850	18	FSM	ENSG00000135605.13	ENST00000381501.8	3661	18	-43	-146	-43	146	multi-exon	TRUE	canonical	2	8	junction_8	5.85877628140646	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCACCTATCAAAAACTCAT	NA	False	NA	NA	False	NA	NA	NA	48269881	48135636	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_48137500_48138664_48138823_48138903_48139023_48141354_48141420_48145078_48145296_48145407_48145580_48146324_48146400_48149556_48149691_48150862_48150943_48156679_48156735_48163701_48163768_48167777_48167954_48168585_48168627_48170247_48170377_48171367_48171450_48176081_48176187_48228476_48228660_48269751
H1_mix_00067347	chr4	-	11744	64	NNC	ENSG00000075539.15	novel	11692	64	NA	NA	-18	10	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_22	12.4963486730617	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCATTAGGATGGCCTTC	-17	True	NA	12	True	AATAAA	-35	NA	48780297	48497346	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_48499681_48500029_48500221_48501622_48501734_48505546_48505616_48510058_48510158_48510834_48510985_48512480_48512689_48515027_48515276_48521047_48521216_48522900_48523105_48527476_48527654_48527970_48528046_48528174_48528337_48531155_48531354_48534544_48534686_48535656_48535828_48539970_48540069_48540352_48540961_48542026_48542122_48543806_48543998_48544782_48544905_48546066_48546269_48547583_48547770_48548689_48548794_48549472_48549624_48550591_48550705_48551493_48551579_48553214_48553384_48556977_48557119_48557452_48557713_48561467_48561637_48562888_48562989_48563947_48564103_48564932_48565044_48565530_48565692_48567247_48567421_48570826_48570919_48573185_48573244_48575116_48575242_48576029_48576223_48578972_48579242_48580864_48580952_48581419_48581606_48582496_48582735_48586620_48586729_48589744_48589878_48590658_48590831_48593929_48594017_48595589_48595699_48595896_48596001_48598828_48598874_48602019_48602122_48603289_48603389_48605740_48605834_48606437_48606607_48608986_48609068_48609743_48609824_48619273_48619371_48620638_48620779_48623125_48623180_48634290_48634491_48684672_48684796_48710518_48710699_48780077
H1_mix_00067349	chr4	-	3482	4	FSM	ENSG00000075539.15	ENST00000503339.5	3482	4	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	6.48074069840786	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGTGTTGTATTTTAAC	NA	False	NA	-12	True	AATAAA	-17	NA	48506612	48497566	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_48499681_48500029_48500221_48501622_48501734_48505546
H1_mix_00067350	chr4	-	11240	63	NNC	ENSG00000075539.15	novel	11692	64	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_24	13.5926312901593	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGTGTTGTATTTTAAC	116	False	NA	-12	True	AATAAA	-17	NA	48780164	48497566	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_48499681_48500029_48500221_48501622_48501734_48505546_48505616_48510058_48510158_48510834_48510985_48512480_48512689_48515027_48515276_48521047_48521216_48522900_48523105_48527476_48527654_48527970_48528046_48528174_48528337_48531155_48531354_48534544_48534686_48535656_48535828_48539970_48540069_48540352_48540961_48542026_48542122_48543806_48543998_48544782_48544905_48546066_48546269_48547583_48547770_48548689_48548794_48550591_48550705_48551493_48551579_48553214_48553384_48556977_48557119_48557452_48557713_48561467_48561637_48562888_48562989_48563947_48564103_48564932_48565044_48565530_48565692_48567247_48567421_48570826_48570919_48573185_48573244_48575116_48575242_48576029_48576223_48578972_48579242_48580864_48580952_48581419_48581606_48582496_48582735_48586620_48586729_48589744_48589878_48590658_48590831_48593929_48594017_48595589_48595699_48595896_48596001_48598828_48598874_48602019_48602122_48603289_48603389_48605740_48605834_48606437_48606607_48608986_48609068_48609743_48609824_48619273_48619371_48620638_48620779_48623125_48623180_48634290_48634491_48684672_48684796_48710518_48710699_48780077
H1_mix_00067356	chr4	-	636	6	FSM	ENSG00000145247.12	ENST00000273860.8	636	6	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_1	794.695312682792	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAACATTGTGTCTGTCA	24	False	NA	NA	False	AATAAA	-16	NA	48906788	48885387	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_48885566_48894005_48894054_48897803_48897858_48899828_48899926_48904483_48904612_48906657
H1_mix_00067357	chr4	-	812	6	FSM	ENSG00000145247.12	ENST00000508069.6	812	6	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_4	812.464497685899	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTCTGTCACTCACT	NA	False	NA	NA	False	AATAAA	-22	NA	48906937	48885381	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_48885566_48892771_48892890_48894005_48894054_48897803_48897858_48904483_48904612_48906657
H1_mix_00067358	chr4	-	471	4	FSM	ENSG00000145247.12	ENST00000506226.6	459	4	0	-12	0	0	multi-exon	FALSE	canonical	3	133	junction_2	1090.4990702528	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAACATTGTGTCTGTCA	38	False	48906796	NA	False	AATAAA	-16	NA	48906774	48885387	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_48885566_48894005_48894054_48904483_48904612_48906657
H1_mix_00067360	chr4	-	4248	6	FSM	ENSG00000163069.13	ENST00000381431.10	4248	6	0	0	0	0	multi-exon	FALSE	canonical	3	542	junction_4	76.8130197297307	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTGTTAATTTTTTAAG	-16	True	NA	-26	True	AATAAA	-15	NA	52038299	52020705	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_52024161_52027967_52028100_52028729_52028922_52029677_52029864_52033430_52033641_52038226
H1_mix_00067361	chr4	-	663	5	FSM	ENSG00000163069.13	ENST00000506357.5	663	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	293.216963185966	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGAAAAGTTTGAATGTT	998	False	NA	NA	False	NA	NA	NA	52038245	52028770	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_52028922_52029677_52029864_52031864_52031962_52033430_52033641_52038226
H1_mix_00067364	chr4	-	4211	3	FSM	ENSG00000226887.8	ENST00000443173.6	3614	3	-189	-408	-28	408	multi-exon	FALSE	canonical	3	93	junction_1	2	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTGAGATTCTGTGGCA	-9	True	NA	NA	False	NA	NA	NA	52751614	52742144	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_52745944_52750929_52751070_52751342
H1_mix_00067365	chr4	-	4331	4	FSM	ENSG00000226887.8	ENST00000440542.1	2744	4	-215	-1372	-28	408	multi-exon	FALSE	canonical	3	43	junction_2	24.1660919471891	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTGAGATTCTGTGGCA	-9	True	NA	NA	False	NA	NA	NA	52751614	52742144	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_52745944_52750709_52750830_52750929_52751070_52751342
H1_mix_00067366	chr4	-	706	2	Antisense	novelGene_ENSG00000250302.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTTCCAGCCAGAACTTA	NA	False	NA	25	True	AATAAA	-43	NA	52862176	52861118	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_-_52861732_52862083
H1_mix_00067367	chr4	-	3542	9	FSM	ENSG00000184178.17	ENST00000401642.8	3162	9	0	-380	0	380	multi-exon	FALSE	canonical	1	13	junction_3	14.1680759102992	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTCATTCCTAAAGATT	-23	True	NA	13	True	AATAAA	-43	NA	53366061	52872601	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_52874062_52885746_52885867_52907456_52907592_52920724_52920871_53145332_53145583_53273825_53274002_53313635_53313764_53352597_53352767_53365103
H1_mix_00067368	chr4	-	1030	3	ISM	ENSG00000072201.14	ENST00000306888.6	3757	10	81181	1155	31347	-1155	3prime_fragment	FALSE	canonical	3	41	junction_2	4	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGTCTTTTAGTATGTG	28	False	NA	-1	True	AATAAA	-17	NA	53477036	53460455	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_53461043_53461434_53461594_53476752
H1_mix_00067369	chr4	-	3980	11	FSM	ENSG00000072201.14	ENST00000263925.8	3978	11	0	-2	0	2	multi-exon	FALSE	canonical	2	8	junction_7	13.5679770046975	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	-2	True	NA	NA	False	NA	NA	NA	53591486	53459298	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_53461043_53461434_53461594_53476752_53476982_53478564_53478743_53481719_53481855_53496022_53496395_53498640_53498844_53507316_53507470_53507985_53508228_53573622_53574089_53591387
H1_mix_00067370	chr4	-	1109	6	FSM	ENSG00000109220.11	ENST00000263921.8	1109	6	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_4	17.5840837122666	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCCAGCCTTTTTTATTT	-3	True	NA	-10	True	CATAAA	-3	NA	54064605	54009788	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_54010146_54013836_54013897_54014062_54014120_54048954_54049111_54049250_54049306_54064181
H1_mix_00067371	chr4	-	953	6	FSM	ENSG00000109220.11	ENST00000510894.1	528	6	-425	0	-118	0	multi-exon	FALSE	canonical	3	15	junction_3	68.7592902813867	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTGTTTTTGTTTTTT	1028	False	NA	-8	True	NA	NA	NA	54064723	54009978	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_54010146_54013836_54013897_54014062_54014120_54049038_54049111_54049250_54049306_54064181
H1_mix_00067372	chr4	-	248	1	FSM	ENSG00000244422.3	ENST00000484463.3	213	1	8	-43	8	43	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAACAAGAAAGCAAGG	NA	False	NA	NA	False	ATTAAA	-14	NA	54976363	54976115	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_54976100_54976400
H1_mix_00067373	chr4	-	5833	30	FSM	ENSG00000128052.10	ENST00000263923.5	5833	30	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_27	31.9526626684731	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATCCCTTTGCAAGGTTG	-1	True	NA	-13	True	ATTAAA	-20	NA	55125595	55078480	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_55080164_55081955_55082042_55082535_55082636_55087606_55087759_55088867_55088974_55089373_55089474_55089690_55089803_55089955_55090079_55092616_55092715_55094801_55094956_55095576_55095666_55096228_55096343_55097661_55097767_55098136_55098273_55098696_55098804_55101896_55102029_55102361_55102509_55104642_55104985_55105831_55105941_55106686_55106811_55107736_55107894_55110402_55110567_55110653_55110769_55113303_55113482_55114125_55114266_55114873_55115043_55115280_55115412_55118603_55118801_55121096_55121191_55125226
H1_mix_00067374	chr4	-	10304	22	FSM	ENSG00000134852.15	ENST00000309964.8	10304	22	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_20	7.83329714856312	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATTTCCCTTTCTTTTA	NA	False	NA	0	True	ATTAAA	-21	NA	55510027	55427902	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_55435595_55438281_55438538_55442431_55442635_55443686_55443897_55444632_55444786_55448778_55448869_55449395_55449497_55450090_55450233_55453053_55453130_55453676_55453825_55455896_55456004_55456217_55456301_55458891_55459011_55459147_55459262_55463684_55463806_55470716_55470807_55475962_55476055_55478814_55478964_55479639_55479700_55482738_55482829_55489373_55489466_55509911
H1_mix_00067379	chr4	-	890	9	FSM	ENSG00000109255.11	ENST00000511469.5	756	9	-136	2	-122	0	multi-exon	FALSE	canonical	3	23	junction_7	60.5411791675716	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCTTAGTGTTTTAAT	373	False	NA	-17	True	ATTAAA	-14	NA	55636420	55595230	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_55595412_55599141_55599182_55600521_55600576_55605274_55605350_55607297_55607349_55607436_55607467_55609119_55609180_55630401_55630461_55636080
H1_mix_00067380	chr4	-	818	10	FSM	ENSG00000109255.11	ENST00000264218.7	816	10	0	-2	0	0	multi-exon	TRUE	canonical	3	146	junction_9	21.7942114865619	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTTAGTGTTTTAATGA	-2	True	NA	-15	True	ATTAAA	-16	NA	55636298	55595228	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_55595412_55599141_55599182_55600521_55600576_55605274_55605350_55607297_55607349_55607436_55607467_55609119_55609180_55616337_55616386_55630401_55630461_55636080
H1_mix_00067381	chr4	-	836	10	NIC	ENSG00000109255.11	novel	816	10	NA	NA	-83	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_9	46.2769441034686	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCTTAGTGTTTTAAT	12	False	NA	-17	True	ATTAAA	-14	NA	55636781	55595230	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_55595412_55599141_55599182_55600521_55600576_55605274_55605350_55607297_55607349_55607436_55607467_55609119_55609180_55616337_55616386_55630401_55630461_55636543
H1_mix_00067382	chr4	-	658	9	FSM	ENSG00000109255.11	ENST00000507338.1	658	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	63.5136550278757	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAACAATGTTGTAAATGT	-1	True	NA	-70	True	NA	NA	NA	55636268	55595283	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_55595412_55599141_55599182_55600521_55600576_55607297_55607349_55607436_55607467_55609119_55609180_55616337_55616386_55630401_55630461_55636080
H1_mix_00067383	chr4	-	3681	15	FSM	ENSG00000157426.14	ENST00000205214.11	3581	15	68	-168	0	165	multi-exon	FALSE	canonical	3	37	junction_4	8.54400374531753	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGATGCTCAGATGATTG	39	True	NA	NA	False	NA	NA	NA	56387423	56338121	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_56338792_56342834_56342967_56343561_56343685_56345126_56345291_56349262_56350059_56351341_56351458_56353403_56353597_56354038_56354212_56354704_56354812_56355181_56355424_56371450_56371644_56378147_56378465_56382476_56382598_56384069_56384342_56387361
H1_mix_00067385	chr4	-	2999	12	NIC	ENSG00000157426.14	novel	3581	15	NA	NA	99	-12	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	20.8108363380934	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTGGCTAAGAAACGGAA	3262	False	NA	NA	False	ATTAAA	-10	NA	56384200	56338304	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_56338792_56343561_56343685_56349262_56350059_56351341_56351458_56353403_56353597_56354038_56354212_56354704_56354812_56355181_56355424_56371450_56371644_56378147_56378465_56382476_56382598_56384069
H1_mix_00067386	chr4	-	3150	11	FSM	ENSG00000157426.14	ENST00000502617.1	3004	11	-97	-49	-89	49	multi-exon	FALSE	canonical	3	48	junction_8	6.24579858785088	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAGTTCTGGCTCAGGGC	NA	False	NA	54	True	NA	NA	NA	56387597	56348878	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_56350059_56351341_56351458_56353403_56353597_56354038_56354212_56354704_56354812_56355181_56355424_56371450_56371644_56378147_56378465_56382476_56382598_56384069_56384342_56387361
H1_mix_00067389	chr4	-	613	4	FSM	ENSG00000128040.12	ENST00000248701.8	613	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	0.942809041582063	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTACTGTTCTCTGTTG	-29	True	NA	1	True	AATAAA	-17	NA	56821742	56809860	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_56810185_56811684_56811795_56820535_56820580_56821607
H1_mix_00067392	chr4	-	3668	2	NNC	ENSG00000289308.1	novel	710	2	NA	NA	-34	2	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGGTGGTCTCTTCAC	6579	False	NA	3	True	AATAAA	-24	NA	61769683	61764251	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_61767631_61769394
H1_mix_00067393	chr4	-	262	1	FSM	ENSG00000226439.3	ENST00000461060.1	402	1	-122	262	-122	-262	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTTTGTGTGCTTGCAT	290	False	NA	NA	False	NA	NA	NA	61775972	61775710	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_61775700_61776000
H1_mix_00067394	chr4	-	6821	19	FSM	ENSG00000145241.11	ENST00000273853.11	6823	19	0	2	0	-2	multi-exon	FALSE	canonical	3	69	junction_4	13.3041346956501	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTTTTTGTGTAAATTTA	-10	True	NA	-13	True	AATAAA	-21	NA	67545503	67468763	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_67472676_67474887_67474979_67489966_67490122_67492179_67492276_67492868_67492998_67493883_67493989_67495158_67495213_67505204_67505285_67506787_67506935_67508813_67509106_67512401_67512570_67514073_67514688_67518155_67518369_67519216_67519503_67530814_67530915_67539839_67539935_67540979_67541051_67544148_67544196_67545337
H1_mix_00067395	chr4	-	508	3	FSM	ENSG00000145241.11	ENST00000507196.1	508	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	21	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGACAGTTTTTTAAGTA	NA	False	NA	NA	False	AAGAAA	-3	NA	67508919	67505029	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_67505285_67506787_67506935_67508813
H1_mix_00067398	chr4	-	1667	13	FSM	ENSG00000033178.13	ENST00000420827.2	1664	13	0	-3	0	3	multi-exon	FALSE	canonical	3	104	junction_5	30.2696217353306	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAAGATTCTATTATTTT	-7	True	NA	NA	False	TATAAA	-23	NA	67701153	67661659	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_67662256_67663138_67663216_67663884_67663948_67665188_67665293_67668550_67668675_67670469_67670593_67673696_67673778_67677610_67677723_67678438_67678534_67681562_67681592_67682118_67682214_67696644_67696708_67701048
H1_mix_00067400	chr4	-	6247	17	FSM	ENSG00000083896.13	ENST00000579690.5	2983	17	-341	-2923	-4	-14	multi-exon	FALSE	canonical	3	91	junction_4	58.7084959780099	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTTAAATACTACTATGT	11	False	68350105	NA	False	AATAAA	-12	NA	68350094	68310400	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_68314324_68316313_68316449_68318518_68318582_68318689_68318754_68318825_68318863_68320122_68320206_68322748_68322916_68324138_68324224_68330001_68330120_68330201_68330311_68332102_68332198_68332793_68332848_68333307_68333398_68337026_68337451_68337571_68337901_68338282_68338385_68349725
H1_mix_00067401	chr4	-	3244	16	FSM	ENSG00000083896.13	ENST00000355665.7	3244	16	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_11	75.8816622555586	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTTGTATCTTTTTCT	16	False	68350105	-22	True	AATAAA	-19	NA	68350089	68313320	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_68314324_68316313_68316449_68318518_68318582_68318689_68318730_68318825_68318863_68320122_68320206_68322748_68322916_68324138_68324224_68330001_68330120_68330201_68330311_68332102_68332198_68333307_68333398_68337026_68337451_68337571_68337901_68338282_68338385_68349725
H1_mix_00067403	chr4	-	6612	10	FSM	ENSG00000132463.15	ENST00000254799.11	6610	10	0	-2	0	2	multi-exon	FALSE	canonical	3	549	junction_5	69.9181178942665	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTGAACCTACATTTT	-6	True	NA	-8	True	AATAAA	-23	NA	70839890	70815780	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_70820862_70824293_70824369_70825295_70825432_70826123_70826246_70827851_70828037_70831538_70831675_70832306_70832451_70833117_70833274_70836157_70836315_70839470
H1_mix_00067404	chr4	-	3561	9	FSM	ENSG00000132463.15	ENST00000505068.5	3561	9	0	0	0	0	multi-exon	FALSE	canonical	3	549	junction_4	73.8884294054218	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTACCTAAGAGTATTTAT	3353	False	NA	-7	True	AATAAA	-23	NA	70839897	70819530	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_70820862_70824293_70824369_70825295_70826246_70827851_70828037_70831538_70831675_70832306_70832451_70833117_70833274_70836157_70836315_70839470
H1_mix_00067406	chr4	-	6303	10	FSM	ENSG00000132463.15	ENST00000499044.6	2491	10	160	-3972	0	-3	multi-exon	FALSE	canonical	3	8	junction_9	232.07948829849	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTTTTTGTGAACCTAC	3907	False	NA	-13	True	AATAAA	-18	NA	70839343	70815785	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_70820862_70824293_70824369_70825295_70825432_70826123_70826246_70827851_70828037_70831538_70831675_70832306_70832451_70833117_70833274_70836157_70836315_70839227
H1_mix_00067410	chr4	-	6824	6	FSM	ENSG00000163626.17	ENST00000507544.3	6824	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	14.1844985811977	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTGATCTATGTACAGT	14	True	NA	NA	False	AATAAA	-20	NA	73069716	73052361	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_73058288_73061812_73061921_73064777_73064903_73065249_73065414_73068028_73068130_73069316
H1_mix_00067411	chr4	-	2301	7	NNC	ENSG00000163626.17	novel	6824	6	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	18.1169043222683	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCATTTCTTTGATTGAT	14	True	NA	-5	True	AATAAA	-24	NA	73069716	73056078	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_73057164_73057966_73058288_73061812_73061921_73064777_73064900_73065249_73065414_73068028_73068130_73069316
H1_mix_00067413	chr4	-	11793	34	FSM	ENSG00000132466.20	ENST00000358602.9	10797	34	-335	-661	-335	661	multi-exon	FALSE	canonical	0	0	junction_15	56.6711714300846	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTAGCTTTGGTTTTGA	-4	True	NA	NA	False	AATAAA	-22	NA	73259133	73072714	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_73076291_73076939_73077105_73077354_73077534_73078641_73078891_73085248_73085447_73090666_73092301_73094078_73094229_73097116_73097273_73098072_73098521_73102375_73102548_73113791_73113909_73115820_73115917_73118687_73118851_73120161_73120338_73120880_73121095_73121616_73121760_73124912_73125059_73125200_73125313_73135116_73135266_73139530_73140284_73141740_73141844_73142241_73142386_73142639_73142768_73144744_73144833_73146763_73146874_73147240_73147433_73148812_73149051_73151429_73151525_73153879_73154114_73155630_73155779_73156018_73156167_73161191_73161349_73177379_73177534_73258275
H1_mix_00067414	chr4	-	11790	34	FSM	ENSG00000132466.20	ENST00000558247.5	8456	34	-811	-2523	-335	661	multi-exon	FALSE	canonical	0	0	junction_15	62.1289573885573	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTAGCTTTGGTTTTGA	-4	True	NA	NA	False	AATAAA	-22	NA	73259133	73072714	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_73076291_73076939_73077105_73077354_73077534_73078641_73078891_73085248_73085447_73090666_73092301_73094078_73094229_73097116_73097273_73098072_73098521_73102375_73102548_73113791_73113909_73115820_73115917_73118687_73118851_73120161_73120338_73120880_73121095_73121616_73121760_73124912_73125059_73125200_73125313_73135116_73135263_73139530_73140284_73141740_73141844_73142241_73142386_73142639_73142768_73144744_73144833_73146763_73146874_73147240_73147433_73148812_73149051_73151429_73151525_73153879_73154114_73155630_73155779_73156018_73156167_73161191_73161349_73177379_73177534_73258275
H1_mix_00067415	chr4	-	7734	33	FSM	ENSG00000132466.20	ENST00000330838.10	7734	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	60.712951666016	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTACTGGTGTAATTT	-2	True	NA	NA	False	ATTAAA	-17	NA	73258798	73075685	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_73076291_73076939_73077105_73077354_73077534_73078641_73078891_73085248_73085447_73090666_73092301_73094078_73094229_73097116_73097273_73098072_73098521_73102375_73102548_73113791_73113909_73115820_73115917_73118687_73118851_73120161_73120338_73120880_73121095_73121616_73121760_73124912_73125059_73125200_73125313_73135116_73135266_73141740_73141844_73142241_73142386_73142639_73142768_73144744_73144833_73146763_73146874_73147240_73147433_73148812_73149051_73151429_73151525_73153879_73154114_73155630_73155779_73156018_73156167_73161191_73161349_73177379_73177534_73258275
H1_mix_00067416	chr4	-	3095	6	ISM	ENSG00000132466.20	ENST00000514252.1	3259	19	32363	-1623	-17492	1623	3prime_fragment	FALSE	canonical	3	33	junction_1	82.7221856577787	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGCCGTTCTGAGTAGT	NA	False	NA	-4	True	AATAAA	-20	NA	73121572	73111460	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_73113312_73113791_73113909_73115820_73115917_73118687_73118851_73120161_73120338_73120880
H1_mix_00067419	chr4	-	2735	10	FSM	ENSG00000169435.14	ENST00000395777.6	2735	10	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_4	6.09188896083235	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGGTACCCTAAGGCTG	8	True	NA	NA	False	AATAAA	-9	NA	73620412	73574570	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_73576311_73576409_73576508_73576612_73576732_73581816_73581869_73585179_73585365_73587839_73587935_73593450_73593594_73598639_73598719_73611730_73611830_73620287
H1_mix_00067420	chr4	-	525	3	FSM	ENSG00000163737.5	ENST00000296029.4	773	3	0	248	0	15	multi-exon	FALSE	canonical	3	7	junction_1	2.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTCTTAATAATAGTGCA	-3	True	NA	4	True	AATAAA	-32	NA	73982027	73981058	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_73981292_73981416_73981544_73981862
H1_mix_00067421	chr4	-	2436	4	FSM	ENSG00000163735.7	ENST00000296027.5	2436	4	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_3	13.1993265821489	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATATTGTTTCTCCTTCC	1	True	NA	-3	True	AATAAA	-24	NA	73998677	73995641	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_73997656_73998011_73998096_73998205_73998339_73998472
H1_mix_00067425	chr4	-	1237	3	FSM	ENSG00000081041.9	ENST00000296031.4	577	3	-43	-617	-42	-19	multi-exon	FALSE	canonical	3	9	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAATATTTAAAAATAT	NA	False	NA	NA	False	NA	NA	NA	74099238	74097058	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_74097772_74098600_74098685_74098798
H1_mix_00067429	chr4	-	5186	9	FSM	ENSG00000163743.14	ENST00000324439.10	4408	9	2	-780	2	780	multi-exon	FALSE	canonical	3	615	junction_6	19.6941457037364	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGGGTTGTCTCTTCAT	8	True	NA	NA	False	TATAAA	-14	NA	75514401	75478252	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75482667_75490580_75490702_75491610_75491638_75491723_75491783_75491888_75491934_75494100_75494180_75508819_75508936_75509176_75509297_75514196
H1_mix_00067430	chr4	-	1121	9	FSM	ENSG00000163743.14	ENST00000504085.5	1123	9	2	0	2	0	multi-exon	FALSE	canonical	3	8	junction_2	274.731687287797	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCACTGTGCTTGTGTT	8	True	NA	NA	False	NA	NA	NA	75514401	75482341	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75482667_75490580_75490702_75491582_75491638_75491723_75491783_75491888_75491934_75494100_75494180_75508823_75508936_75509176_75509297_75514196
H1_mix_00067431	chr4	-	1011	9	FSM	ENSG00000163743.14	ENST00000512706.5	1011	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_8	209.175763414407	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAATCATATTACAAGTA	-21	True	NA	NA	False	NA	NA	NA	75514430	75482412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75482667_75490580_75490702_75491610_75491638_75491723_75491783_75491888_75491934_75494100_75494180_75508819_75508936_75509176_75509297_75514240
H1_mix_00067434	chr4	-	5142	11	FSM	ENSG00000138757.15	ENST00000678552.1	5142	11	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_10	739.794998631378	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	185	False	NA	NA	False	NA	NA	NA	75673205	75641848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75673018
H1_mix_00067435	chr4	-	5285	12	FSM	ENSG00000138757.15	ENST00000676974.1	5285	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_11	1094.21813287573	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	-24	True	NA	NA	False	NA	NA	NA	75673414	75641848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75653982_75654082_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662074_75673207
H1_mix_00067436	chr4	-	5095	10	FSM	ENSG00000138757.15	ENST00000678244.1	5095	10	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_9	762.220310979139	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	NA	False	NA	NA	False	NA	NA	NA	75673466	75641848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75673207
H1_mix_00067437	chr4	-	5367	13	FSM	ENSG00000138757.15	ENST00000678971.1	5367	13	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_12	1154.57965836057	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	-30	True	NA	NA	False	NA	NA	NA	75724456	75641848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75653982_75654082_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75694797_75694930_75724275
H1_mix_00067438	chr4	-	5398	13	FSM	ENSG00000138757.15	ENST00000677265.1	5398	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_11	1058.49850089119	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	-39	True	NA	NA	False	NA	NA	NA	75724465	75641848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75694797_75694930_75724055_75724177_75724275
H1_mix_00067440	chr4	-	5385	13	FSM	ENSG00000138757.15	ENST00000678100.1	5385	13	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_5	1122.98830940289	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	-59	True	NA	NA	False	NA	NA	NA	75724485	75641848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75653982_75654082_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75724055_75724177_75724275
H1_mix_00067441	chr4	-	5327	12	FSM	ENSG00000138757.15	ENST00000678062.1	5327	12	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_5	1038.46358220703	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	NA	False	NA	NA	False	NA	NA	NA	75724548	75641848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75653982_75654082_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75724275
H1_mix_00067442	chr4	-	5390	12	FSM	ENSG00000138757.15	ENST00000676666.1	5390	12	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_11	913.854003928345	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	NA	False	NA	NA	False	NA	NA	NA	75724589	75641848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75724055_75724177_75724275
H1_mix_00067444	chr4	-	4325	12	FSM	ENSG00000138757.15	ENST00000359707.9	4321	12	0	-4	0	0	multi-exon	FALSE	canonical	3	161	junction_5	920.606914436933	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTCCCTAATTTAATC	-21	True	NA	-16	True	AATAAA	-23	NA	75673411	75642781	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75653982_75654082_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75673207
H1_mix_00067448	chr4	-	2622	11	FSM	ENSG00000138757.15	ENST00000357854.7	2609	11	0	-13	0	0	multi-exon	FALSE	canonical	3	2013	junction_4	263.269063887119	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATCTTGTTCTTCAGT	-11	True	NA	-23	True	AGTAAA	-15	NA	75673401	75644375	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75673207
H1_mix_00067452	chr4	-	313	1	FSM	ENSG00000201644.2	ENST00000364774.2	94	1	-312	93	-312	-93	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGTCTGATGGTAGTGGG	4762	False	NA	NA	False	NA	NA	NA	75662525	75662212	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75662200_75662500
H1_mix_00067453	chr4	-	1506	9	Fusion	ENSG00000138744.16_ENSG00000198301.12	novel	1425	7	NA	NA	0	2809	multi-exon	FALSE	canonical	3	7	junction_1	17.9474058013965	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAAGCCTATTTGGTGGT	15	True	NA	-4	True	ATTAAA	-16	NA	75940983	75910850	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr4_-_75911354_75919908_75919976_75920737_75920801_75920950_75921124_75925734_75925812_75931213_75931305_75936108_75936236_75940000_75940166_75940743
H1_mix_00067457	chr4	-	4875	22	FSM	ENSG00000198301.12	ENST00000356260.10	3003	22	8	-1880	0	1871	multi-exon	TRUE	canonical	3	349	junction_13	40.2941564946959	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAGAGTATTATGCAGCC	4	True	NA	-2	True	AATAAA	-18	NA	75990937	75948034	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75950798_75955974_75956137_75957324_75957410_75957517_75957709_75957846_75957942_75960065_75960193_75961027_75961105_75961210_75961309_75964134_75964212_75965763_75965823_75967276_75967335_75969295_75969400_75970308_75970379_75971356_75971459_75973316_75973392_75974075_75974134_75975743_75975845_75975923_75975996_75977645_75977757_75981371_75981471_75981932_75982038_75990751
H1_mix_00067458	chr4	-	3080	22	FSM	ENSG00000198301.12	ENST00000395710.5	3080	22	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_20	93.5116857625273	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTGGAGTGGTGTGTGG	3	True	NA	-2	True	AATAAA	-29	NA	75990938	75949905	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75950798_75955974_75956137_75957324_75957410_75957517_75957709_75957846_75957942_75960065_75960193_75961027_75961105_75961210_75961309_75964134_75964212_75965763_75965823_75967276_75967335_75969295_75969400_75970308_75970379_75971356_75971459_75973316_75973392_75974075_75974134_75975743_75975845_75975923_75975996_75977645_75977757_75981371_75981546_75981932_75982038_75990751
H1_mix_00067464	chr4	-	4698	12	FSM	ENSG00000138760.11	ENST00000264896.8	4694	12	0	-4	0	4	multi-exon	TRUE	canonical	3	223	junction_8	25.1264570318859	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGAAGTCATATGTCATT	0	True	NA	-17	True	AATAAA	-23	NA	76213824	76158732	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_76161752_76163224_76163384_76166249_76166302_76168402_76168477_76169866_76169986_76174143_76174314_76175790_76175911_76176436_76176529_76179516_76179706_76180953_76181102_76195706_76195865_76213426
H1_mix_00067465	chr4	-	4505	12	FSM	ENSG00000138760.11	ENST00000638295.1	4507	12	2	0	2	0	multi-exon	FALSE	canonical	2	4	junction_11	83.2993208826106	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAAACCACTTTATATA	-5	True	NA	-44	True	AATGAA	-12	NA	76234534	76158759	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_76161752_76163224_76163384_76166249_76166302_76168402_76168477_76169866_76169986_76174143_76174314_76175790_76175911_76176436_76176529_76179516_76179706_76180953_76181102_76195706_76195865_76234302
H1_mix_00067467	chr4	-	4048	1	FSM	ENSG00000186212.4	ENST00000334306.4	3993	1	-55	0	-55	0	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGCTGATTACTGTTTT	NA	False	NA	NA	False	ATTAAA	-30	NA	76898199	76894151	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_76894200_76898200
H1_mix_00067470	chr4	-	9356	13	NNC	ENSG00000138767.14	novel	8772	12	NA	NA	-649	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	5.99247212944893	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTTTGTCTTGGTTTTTG	-7	True	NA	-14	True	AATAAA	-20	NA	77820264	77713386	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_77714439_77714464_77720644_77726166_77726370_77728853_77729082_77731386_77731539_77742140_77742296_77744717_77744876_77748315_77748385_77756861_77756952_77773080_77773167_77774529_77774717_77776270_77776393_77819589
H1_mix_00067475	chr4	-	9811	6	FSM	ENSG00000163291.14	ENST00000512733.5	9811	6	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_5	45.5306490179967	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGTAGTGAATTTTGTC	-39	True	NA	NA	False	AATACA	-18	NA	78939438	78911877	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_78920682_78923856_78923948_78926520_78926719_78930169_78930326_78935120_78935284_78939039
H1_mix_00067477	chr4	-	3372	5	FSM	ENSG00000163291.14	ENST00000515853.5	3370	5	0	-2	0	0	multi-exon	FALSE	canonical	3	57	junction_4	127.758316754722	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAACTGCTGCTTGTCA	-1	True	NA	NA	False	AATAAA	-17	NA	78939224	78917939	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_78920682_78923856_78923948_78926520_78926719_78930169_78930326_78939039
H1_mix_00067480	chr4	-	2941	14	FSM	ENSG00000138670.19	ENST00000264400.7	2941	14	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_10	11.9153821323928	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGGCGTCTTTCTTTTC	2	True	NA	0	True	AATATA	-22	NA	81471907	81426392	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_81427793_81432298_81432372_81433839_81433964_81434638_81434735_81440833_81440930_81442296_81442377_81445525_81445629_81445742_81445839_81447503_81447579_81448068_81448285_81456650_81456789_81457498_81457622_81459331_81459515_81471769
H1_mix_00067481	chr4	-	1804	14	NIC	ENSG00000138670.19	novel	2941	14	NA	NA	0	-61	combination_of_known_junctions	FALSE	canonical	3	23	junction_10	8.86252665430264	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGCACATTATTCATCTC	19	False	NA	NA	False	NA	NA	NA	81471890	81427509	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_81427793_81432298_81432372_81433839_81433964_81434638_81434735_81440833_81440930_81442296_81442377_81445525_81445629_81445742_81445839_81447503_81447579_81448068_81448282_81456650_81456789_81457498_81457622_81459331_81459515_81471769
H1_mix_00067483	chr4	-	3068	9	FSM	ENSG00000138668.19	ENST00000313899.12	3068	9	0	0	0	0	multi-exon	FALSE	canonical	3	3276	junction_3	1531.48771114071	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGGTCTCCCTCTGTCGTT	-14	True	NA	-5	True	AATAAA	-18	NA	82373991	82352497	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82354155_82355303_82355402_82356536_82356684_82356795_82356896_82357312_82357445_82358658_82358821_82359470_82359640_82371527_82371585_82373445
H1_mix_00067484	chr4	-	1585	8	FSM	ENSG00000138668.19	ENST00000353341.8	1585	8	0	0	0	0	multi-exon	FALSE	canonical	3	4190	junction_2	1238.97880926024	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGGCTCTTTTATCAT	-9	True	NA	-29	True	AATAAA	-17	NA	82373986	82353828	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82354155_82355303_82355402_82356795_82356896_82357312_82357445_82358658_82358821_82359470_82359640_82371527_82371585_82373445
H1_mix_00067486	chr4	-	1667	8	FSM	ENSG00000138668.19	ENST00000352301.8	1667	8	0	0	0	0	multi-exon	FALSE	canonical	3	1908	junction_7	2114.08190137333	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	-6	True	NA	30	True	AATAAA	-12	NA	82373983	82353833	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82354155_82355303_82355402_82356536_82356684_82356795_82356896_82357312_82357445_82358658_82358821_82359470_82359640_82373445
H1_mix_00067487	chr4	-	1681	7	NIC	ENSG00000138668.19	novel	1667	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	1908	junction_6	2046.59093915277	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	27	True	NA	30	True	AATAAA	-12	NA	82374144	82353833	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_82354155_82355303_82355402_82356795_82356896_82357312_82357445_82358658_82358821_82359470_82359640_82373445
H1_mix_00067488	chr4	-	1796	11	NNC	ENSG00000138668.19	novel	3068	9	NA	NA	165	0	intron_retention	FALSE	canonical	2	3	junction_10	2636.13879755979	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	30	True	AATAAA	-12	NA	82374338	82353833	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_82354155_82355303_82355402_82356536_82356684_82356795_82356896_82357312_82357445_82358658_82358821_82359470_82359640_82371527_82371585_82373445_82373978_82374118_82374156_82374297
H1_mix_00067493	chr4	-	3971	7	FSM	ENSG00000152795.18	ENST00000614627.4	3968	7	0	-3	0	3	multi-exon	FALSE	canonical	3	168	junction_2	883.3912716848	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGATAAGCAGAGCTTATT	2	True	NA	-17	True	ATTAAA	-26	NA	82430225	82422561	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82424884_82426036_82426130_82427189_82427305_82427432_82427565_82428017_82428180_82428277_82428447_82429247
H1_mix_00067494	chr4	-	4379	8	FSM	ENSG00000152795.18	ENST00000295470.10	4372	8	0	-7	0	3	multi-exon	FALSE	canonical	3	2074	junction_1	291.866128104468	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGATAAGCAGAGCTTATT	-23	True	NA	-17	True	ATTAAA	-26	NA	82430462	82422561	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82424884_82426036_82426130_82426462_82426634_82427189_82427305_82427432_82427565_82428017_82428180_82428277_82428447_82429247
H1_mix_00067495	chr4	-	2406	7	FSM	ENSG00000152795.18	ENST00000507721.5	2404	7	0	-2	0	2	multi-exon	FALSE	canonical	3	2322	junction_4	218.13483343005	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCGTCAGGTACTACA	1324	False	NA	-21	True	AATAAA	-21	NA	82429397	82424622	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82426130_82426462_82426634_82427189_82427305_82427432_82427565_82428017_82428180_82428277_82428447_82429247
H1_mix_00067496	chr4	-	2356	9	FSM	ENSG00000152795.18	ENST00000502762.4	2356	9	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_2	1068.79446544927	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCTTTTCTGCGTCAGGT	320	False	NA	-27	True	AATAAA	-15	NA	82430401	82424628	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82424884_82425562_82425668_82426036_82426130_82426462_82426634_82427189_82427305_82427432_82427565_82428017_82428180_82428277_82428447_82429247
H1_mix_00067497	chr4	-	1318	9	FSM	ENSG00000152795.18	ENST00000630827.1	1318	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_8	889.931317574564	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGCTTTTCTGCGTCAG	322	False	NA	26	True	AATAAA	-13	NA	82430399	82424630	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82424884_82426036_82426130_82426462_82426634_82427189_82427305_82427432_82427565_82428017_82428180_82428277_82428447_82429247_82429413_82430341
H1_mix_00067498	chr4	-	3184	8	FSM	ENSG00000249242.8	ENST00000449862.7	3178	8	0	-6	0	0	multi-exon	TRUE	canonical	3	46	junction_7	6.1145527311522	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTGTCTCTTACACCA	-12	True	NA	0	True	AATAAA	-23	NA	82561988	82483169	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82485720_82490060_82490239_82496067_82496196_82502726_82502795_82502894_82502928_82503058_82503113_82504577_82504668_82561905
H1_mix_00067499	chr4	-	3173	8	FSM	ENSG00000249242.8	ENST00000515780.6	3296	8	117	6	117	0	multi-exon	FALSE	canonical	1	4	junction_7	19.4558631842665	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTATTTCTTTGTCTCTT	8402	False	NA	-6	True	AATAAA	-17	NA	82562240	82483175	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82485720_82490060_82490239_82496067_82496196_82502726_82502795_82502894_82502928_82503058_82503113_82504577_82504668_82562162
H1_mix_00067500	chr4	-	4298	27	FSM	ENSG00000138674.17	ENST00000395310.7	4298	27	0	0	0	0	multi-exon	TRUE	canonical	3	223	junction_14	170.42171848147	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGAAAAGACTGGACATTT	28	True	NA	-1	True	AATAAA	-26	NA	82891153	82818508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842139_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82861630_82861709_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
H1_mix_00067501	chr4	-	4053	26	NIC	ENSG00000138674.17	novel	4298	27	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_13	171.604177105337	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGTGTATAGTCTT	43	True	NA	-35	True	ATTAAA	-14	NA	82891138	82818660	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842139_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
H1_mix_00067502	chr4	-	4012	25	FSM	ENSG00000138674.17	ENST00000348405.8	4012	25	0	0	0	0	multi-exon	FALSE	canonical	3	397	junction_13	108.973206441869	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGTGTATAGTCTT	45	True	NA	-35	True	ATTAAA	-14	NA	82891136	82818660	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842139_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
H1_mix_00067503	chr4	-	3687	24	FSM	ENSG00000138674.17	ENST00000513858.5	3687	24	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	173.417773044061	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGTGTATAGTCTT	28	True	NA	-35	True	ATTAAA	-14	NA	82891153	82818660	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
H1_mix_00067504	chr4	-	3905	26	FSM	ENSG00000138674.17	ENST00000311785.11	3909	26	4	0	4	0	multi-exon	FALSE	canonical	3	18	junction_5	211.983825798102	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTGTGTATAGTCT	-1	True	NA	-36	True	ATTAAA	-13	NA	82891255	82818661	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82861630_82861709_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
H1_mix_00067505	chr4	-	4244	27	FSM	ENSG00000138674.17	ENST00000448323.5	4255	27	11	0	4	0	multi-exon	FALSE	canonical	3	188	junction_26	191.949358459511	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTGTGTATAGTCT	-1	True	NA	-36	True	ATTAAA	-13	NA	82891255	82818661	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842139_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82861630_82861709_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881938_82891087
H1_mix_00067508	chr4	-	4184	27	FSM	ENSG00000138674.17	ENST00000508502.5	3801	27	-44	-339	-7	0	multi-exon	FALSE	canonical	3	169	junction_5	192.148969113448	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTAATCCTATTTTATGTG	9696	False	82891254	-46	True	ATTAAA	-3	NA	82891247	82818671	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842184_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82861630_82861709_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
H1_mix_00067509	chr4	-	3602	25	FSM	ENSG00000138674.17	ENST00000505984.5	3596	25	0	-6	0	0	multi-exon	FALSE	canonical	3	169	junction_5	146.546914890382	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCCAAAGAAACATGTTAAAA	33	True	NA	NA	False	NA	NA	NA	82891148	82819037	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842184_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
H1_mix_00067511	chr4	-	1717	12	FSM	ENSG00000138674.17	ENST00000436790.6	1717	12	0	0	0	0	multi-exon	FALSE	canonical	3	560	junction_11	89.4203556244326	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTGGTTGCCAGCG	-3	True	NA	NA	False	AATAAA	-14	NA	82891184	82863210	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
H1_mix_00067512	chr4	-	2739	5	FSM	ENSG00000251022.6	ENST00000504520.6	2770	5	31	0	31	0	multi-exon	FALSE	canonical	3	236	junction_2	84.6149366246882	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAGTGAGCAATTCAGTT	14	False	NA	NA	False	ATTAAA	-17	NA	82900929	82893008	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82894848_82895691_82895775_82897988_82898063_82900076_82900224_82900333
H1_mix_00067513	chr4	-	2200	3	FSM	ENSG00000251022.6	ENST00000512932.5	971	3	0	-1229	0	-12	multi-exon	FALSE	canonical	3	50	junction_1	209.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAAACATTCTTCTAGTG	-10	True	NA	NA	False	ATTAAA	-5	NA	82900559	82893020	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82894848_82900076_82900224_82900333
H1_mix_00067518	chr4	-	6092	13	FSM	ENSG00000189308.11	ENST00000340417.8	6121	13	29	0	27	0	multi-exon	TRUE	canonical	3	26	junction_12	18.683028543455	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTGACAGCATTTAAGA	2	True	NA	NA	False	ATTAAA	-22	NA	83010794	82924602	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82928304_82930942_82931146_82935980_82936119_82936278_82936382_82937226_82937299_82938412_82938505_82939538_82939737_82939888_82939963_82946257_82946475_82970326_82970470_82978882_82979007_82984160_82984877_83010483
H1_mix_00067520	chr4	-	5279	13	FSM	ENSG00000189308.11	ENST00000510557.5	2257	13	-65	-2957	-26	0	multi-exon	FALSE	canonical	3	25	junction_11	17.8068338941355	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTGACAGCATTTAAGA	-12	True	NA	NA	False	ATTAAA	-22	NA	83012952	82924602	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82928304_82930942_82931146_82935980_82936119_82936278_82936382_82937226_82937299_82938412_82938505_82939538_82939737_82939888_82939963_82946257_82946475_82970326_82970470_82978882_82979007_82984823_82984877_83012791
H1_mix_00067522	chr4	-	6002	13	FSM	ENSG00000189308.11	ENST00000505397.1	2742	13	-86	-3174	-86	0	multi-exon	FALSE	canonical	3	42	junction_10	14.9803111523834	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTGACAGCATTTAAGA	NA	False	NA	NA	False	ATTAAA	-22	NA	83013012	82924602	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82928304_82930942_82931146_82935980_82936119_82936278_82936382_82937226_82937299_82938412_82938505_82939538_82939737_82939888_82939963_82946257_82946475_82970326_82970470_82978882_82979007_82984160_82984877_83012791
H1_mix_00067523	chr4	-	786	5	FSM	ENSG00000145287.11	ENST00000411416.6	786	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	3.49106001094224	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTTCATGCTTCTTTGC	4914	False	NA	-1	True	TATAAA	-25	NA	83109843	83090687	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_83090972_83094677_83094792_83104895_83105021_83107803_83107951_83109727
H1_mix_00067524	chr4	-	1538	7	FSM	ENSG00000173085.15	ENST00000647002.2	1525	7	-13	0	-13	0	multi-exon	FALSE	canonical	3	156	junction_5	9.56411115693571	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGCCTTACTGTTCTTT	323	False	NA	-16	True	AATAAA	-15	NA	83284811	83263823	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_83264364_83267585_83267775_83269859_83269994_83272086_83272173_83273495_83273618_83278947_83279115_83284511
H1_mix_00067526	chr4	-	932	3	FSM	ENSG00000173083.16	ENST00000680713.1	932	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	3	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGGAGGGCCCTGAGTCA	377	False	NA	NA	False	NA	NA	NA	83334801	83318929	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_83319470_83322218_83322365_83334555
H1_mix_00067528	chr4	-	1224	2	ISM	ENSG00000163312.11	ENST00000510985.1	3315	17	0	45776	0	571	5prime_fragment	FALSE	canonical	3	48	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTCCATACTGTTTCTC	20	True	NA	32	True	AGTAAA	-17	NA	83455823	83453148	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_83453946_83455396
H1_mix_00067529	chr4	-	1555	2	FSM	ENSG00000163312.11	ENST00000515482.1	574	2	-21	-960	-21	960	multi-exon	FALSE	canonical	3	22	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACCTTACCTGACTTCTC	-33	True	NA	NA	False	NA	NA	NA	83455876	83452759	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_83453946_83455507
H1_mix_00067531	chr4	-	682	6	FSM	ENSG00000163322.14	ENST00000511801.1	682	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	48.0083326100793	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATGTTGGCCAGTCACT	-3	True	NA	NA	False	TATAAA	-12	NA	83485103	83470202	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_83470397_83472221_83472289_83476642_83476680_83482153_83482245_83483991_83484167_83484985
H1_mix_00067540	chr4	-	3754	14	FSM	ENSG00000109339.24	ENST00000641718.1	3746	14	0	-8	0	0	multi-exon	TRUE	canonical	3	12	junction_5	12.4187298896065	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTCTCTATTTTGCTA	244	False	NA	-13	True	AATAAA	-7	NA	86453174	86015134	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_86017371_86029196_86029275_86031367_86031432_86064265_86064391_86067772_86067956_86089205_86089278_86101051_86101218_86101893_86102033_86103185_86103245_86107222_86107353_86159297_86159468_86194335_86194408_86354529_86354645_86453029
H1_mix_00067541	chr4	-	3109	15	FSM	ENSG00000109339.24	ENST00000641050.1	3109	15	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_14	11.9174456241294	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATGAAACCCCCAAACCA	13	True	NA	-21	True	AATAAA	-13	NA	86594062	86015944	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_86017376_86029196_86029275_86031367_86031432_86064265_86064391_86067772_86067956_86098523_86098596_86101051_86101218_86101893_86102033_86103185_86103245_86107222_86107353_86159297_86159468_86194335_86194408_86354529_86354645_86453029_86453182_86593909
H1_mix_00067542	chr4	-	2635	14	FSM	ENSG00000109339.24	ENST00000395157.9	2665	14	30	0	4	0	multi-exon	FALSE	canonical	2	5	junction_13	12.6818138437238	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTAGAAAGAACATATGT	5	True	NA	-14	True	ATTAAA	-18	NA	86360021	86016477	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_86017376_86029196_86029275_86031367_86031432_86064265_86064391_86067772_86067956_86098523_86098596_86101051_86101218_86101893_86102033_86103185_86103245_86107222_86107353_86159297_86159468_86194335_86194408_86354529_86354645_86359657
H1_mix_00067543	chr4	-	1596	5	FSM	ENSG00000163633.12	ENST00000462714.6	1610	5	11	3	11	-3	multi-exon	FALSE	canonical	1	2	junction_3	5.87367006223537	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAGCAGCATGATTTATA	22	False	NA	NA	False	AATAAA	-20	NA	86892399	86886799	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_86887894_86888120_86888276_86890047_86890139_86891455_86891594_86892281
H1_mix_00067551	chr4	-	6318	7	FSM	ENSG00000163644.15	ENST00000608933.6	6309	7	0	-9	0	9	multi-exon	FALSE	canonical	3	60	junction_6	9.71968220788222	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAACTGTGTTTATTTGGC	-1	True	NA	-3	True	AATAAA	-27	NA	88284561	88257610	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_88262727_88265000_88265136_88268189_88268335_88268740_88268907_88277142_88277244_88278143_88278643_88284405
H1_mix_00067552	chr4	-	5889	6	FSM	ENSG00000163644.15	ENST00000508256.5	923	6	0	-4966	0	9	multi-exon	FALSE	canonical	3	30	junction_5	20.448960853794	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAACTGTGTTTATTTGGC	112	False	NA	-3	True	AATAAA	-27	NA	88284631	88257610	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_88262727_88265000_88265136_88268189_88268335_88268740_88268907_88277142_88277244_88284405
H1_mix_00067553	chr4	-	511	2	FSM	ENSG00000163644.15	ENST00000505022.1	566	2	55	0	55	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGCAGCAGCTGATTTC	908	False	NA	NA	False	NA	NA	NA	88283835	88278192	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_88278643_88283774
H1_mix_00067555	chr4	-	1924	1	FSM	ENSG00000177432.8	ENST00000323061.7	1917	1	0	-7	0	7	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCGGTACTGTGACTGCC	-3	True	NA	NA	False	AATAAA	-29	NA	88697829	88695905	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_88695900_88697800
H1_mix_00067556	chr4	-	5897	24	FSM	ENSG00000138640.15	ENST00000264344.10	5866	24	0	-31	0	26	multi-exon	FALSE	canonical	3	13	junction_17	14.2393793539477	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCGTAAACGTTGAAATAGA	-14	True	NA	NA	False	NA	NA	NA	89057185	88725928	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_88728660_88731326_88731429_88732001_88732199_88737471_88737556_88739029_88739126_88746931_88747016_88747630_88747852_88748951_88749034_88749770_88749910_88750423_88750638_88758753_88758902_88767552_88767596_88767982_88768060_88781164_88781352_88787752_88787933_88790585_88790628_88805010_88805053_88851019_88851184_88906378_88906463_88938087_88938242_88990972_88991151_89020459_89020670_89029459_89029650_89056937
H1_mix_00067557	chr4	-	2157	4	ISM	ENSG00000138640.15	ENST00000515600.1	2206	5	185	-7	0	7	intron_retention	FALSE	canonical	3	49	junction_1	13.7679176187089	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTTGTTCTTTTTAAG	11	True	NA	-5	True	AATAAA	-15	NA	89057160	88989616	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_88991151_89020459_89020670_89029459_89029650_89056937
H1_mix_00067560	chr4	-	3045	6	FSM	ENSG00000145335.17	ENST00000336904.7	3041	6	0	-4	0	4	multi-exon	TRUE	canonical	3	38	junction_5	96.7313806373092	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTCTGCCTCCAGTT	-10	True	NA	1	True	AATAAA	-25	NA	89838315	89724094	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_89726661_89729193_89729278_89822245_89822389_89828142_89828185_89835546_89835693_89838251
H1_mix_00067561	chr4	-	1420	6	FSM	ENSG00000145335.17	ENST00000394986.5	1420	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	95.1419991381304	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTTTTATCCCATCTC	25	True	NA	-3	True	AATAAA	-23	NA	89837139	89726052	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_89726661_89729193_89729278_89822245_89822389_89828142_89828185_89835546_89835693_89836742
H1_mix_00067564	chr4	-	10849	3	Fusion	ENSG00000249152.1_ENSG00000280056.1	novel	616	2	NA	NA	-227	7493	multi-exon	FALSE	canonical	3	891	junction_1	46	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTCTCATGTATATCTTT	NA	False	NA	-14	True	AATAAA	-22	NA	92277302	92252873	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr4_-_92263356_92269242_92269357_92277049
H1_mix_00067565	chr4	-	4561	5	NNC	ENSG00000249152.1	novel	616	2	NA	NA	-236	15892	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	392.611369550093	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCTCATGTATATCTT	NA	False	NA	-15	True	AATAAA	-21	NA	92277311	92252874	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_92256732_92257852_92258021_92263190_92263351_92269242_92269357_92277049
H1_mix_00067566	chr4	-	16744	2	FSM	ENSG00000249152.1_ENSG00000280056.1	ENST00000502518.1	616	2	-236	-15892	-236	7492	multi-exon	FALSE	canonical	3	983	junction_1	0	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCTCATGTATATCTT	NA	False	NA	-15	True	AATAAA	-21	NA	92277311	92252874	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_92269357_92277049
H1_mix_00067568	chr4	-	5487	3	NNC	ENSG00000249152.1	novel	616	2	NA	NA	-227	15878	at_least_one_novel_splicesite	FALSE	canonical	3	130	junction_2	22	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTAAGTTGCCCAGT	NA	False	NA	-29	True	AATAAA	-7	NA	92277302	92252888	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_92257958_92263190_92263356_92277049
H1_mix_00067571	chr4	-	922	1	FSM	ENSG00000249239.2	ENST00000510601.2	933	1	-13	24	-13	-24	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGGCCATCAGCACCTG	NA	False	NA	NA	False	NA	NA	NA	92822931	92822009	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_92822000_92822900
H1_mix_00067575	chr4	-	3347	8	FSM	ENSG00000168785.8	ENST00000305798.8	3347	8	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_5	23.9685167650893	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGTGTCTTTCTTCAT	-1	True	NA	-5	True	AATAAA	-32	NA	98658611	98470366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_98472588_98476188_98476306_98476412_98476461_98478684_98478811_98482004_98482176_98486737_98486885_98507677_98507729_98658145
H1_mix_00067576	chr4	-	2427	7	FSM	ENSG00000151247.13	ENST00000450253.7	2427	7	0	0	0	0	multi-exon	FALSE	canonical	3	1488	junction_6	341.078518167819	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATTTCATTGTAAAATTT	1	True	NA	-4	True	AATAAA	-17	NA	98929133	98879275	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_98881143_98884921_98885062_98887078_98887193_98887888_98887953_98891236_98891333_98901875_98901983_98929094
H1_mix_00067582	chr4	-	2659	9	FSM	ENSG00000197894.12	ENST00000296412.14	2652	9	0	-7	0	7	multi-exon	FALSE	canonical	3	2244	junction_8	205.407521770747	1508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGTGGTAAGTAACATTT	NA	False	NA	23	True	AATAAA	-29	NA	99088788	99070970	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_99072442_99072572_99072712_99074913_99075050_99076291_99076553_99076703_99076924_99081364_99081453_99081974_99082117_99085114_99085217_99088688
H1_mix_00067583	chr4	-	1909	6	FSM	ENSG00000197894.12	ENST00000508511.5	1909	6	0	0	0	0	multi-exon	FALSE	canonical	3	2244	junction_5	244.553797762374	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAAAAATTAAAATAT	9	True	NA	NA	False	NA	NA	NA	99088717	99075224	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_99076553_99076703_99076924_99081364_99081453_99081974_99082117_99085114_99085217_99088688
H1_mix_00067587	chr4	-	3549	8	FSM	ENSG00000145331.14	ENST00000394877.7	3516	8	-21	-12	1	12	multi-exon	FALSE	canonical	3	16	junction_7	9.99591753402052	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACAGAATTTCCTCACAT	-3	True	NA	NA	False	AATAAA	-27	NA	99564038	99546696	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_99549357_99550884_99550991_99553784_99553935_99556145_99556221_99557344_99557417_99558048_99558212_99559153_99559351_99563912
H1_mix_00067588	chr4	-	3560	8	FSM	ENSG00000145331.14	ENST00000394876.7	3547	8	1	-14	1	12	multi-exon	FALSE	canonical	3	9	junction_7	12.0559918204812	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACAGAATTTCCTCACAT	-3	True	NA	NA	False	AATAAA	-27	NA	99564038	99546696	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_99549357_99550884_99550991_99553784_99553935_99556145_99556221_99557344_99557417_99558048_99558212_99559153_99559362_99563912
H1_mix_00067591	chr4	-	5968	8	FSM	ENSG00000164031.17	ENST00000442697.7	5967	8	0	-1	0	1	multi-exon	TRUE	canonical	3	124	junction_5	14.0900891496434	222	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTTTATCATGTTTT	3919	False	99946632	5	True	AATAAA	-24	NA	99946618	99896246	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_99901153_99903725_99903899_99905596_99905707_99906516_99906612_99908710_99908897_99923039_99923186_99930449_99930622_99946438
H1_mix_00067596	chr4	-	1844	2	FSM	ENSG00000164032.12	ENST00000511348.1	1843	2	0	-1	0	1	multi-exon	FALSE	canonical	3	11803	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGTATTAAATTTGCTT	-1	True	NA	-32	True	AATAAA	-18	NA	99950355	99948084	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_99949741_99950167
H1_mix_00067597	chr4	-	866	5	FSM	ENSG00000164032.12	ENST00000296417.6	866	5	0	0	0	0	multi-exon	FALSE	canonical	3	11681	junction_1	462.875793275043	1052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTTGTGTATTAAATTTG	-2	True	NA	-35	True	AATAAA	-15	NA	99950275	99948087	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_99948524_99948810_99948941_99949272_99949387_99949662_99949741_99950167
H1_mix_00067598	chr4	-	1880	2	FSM	ENSG00000164032.12	ENST00000511203.1	1880	2	0	0	0	0	multi-exon	FALSE	canonical	3	12409	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTTGTGTATTAAATTTG	238	False	NA	-35	True	AATAAA	-15	NA	99950299	99948087	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_99948941_99949272
H1_mix_00067599	chr4	-	1254	4	FSM	ENSG00000164032.12	ENST00000511319.5	1254	4	0	0	0	0	multi-exon	FALSE	canonical	3	11681	junction_1	472.057435300221	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGATAAGTTCAATAAAGG	5	True	NA	48	True	NA	NA	NA	99950268	99948119	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_99948524_99948810_99948941_99949272_99949387_99949662
H1_mix_00067600	chr4	-	2604	3	FSM	ENSG00000145358.6	ENST00000273990.6	2604	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	1.5	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTGTCCTCTTTTTTT	-2	True	NA	-3	True	AATAAA	-18	NA	100190468	100185869	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_100188168_100189892_100190033_100190302
H1_mix_00067601	chr4	-	4958	13	FSM	ENSG00000138814.17	ENST00000394853.8	3604	13	-199	-1155	0	236	multi-exon	FALSE	canonical	3	33	junction_4	10.2007624987329	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTCCCCCGACCTCCTG	-23	True	NA	NA	False	NA	NA	NA	101347526	101023172	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_101026062_101032266_101032365_101040481_101040567_101061086_101061162_101063231_101063358_101080531_101080627_101083185_101083264_101093775_101093916_101098366_101098513_101099610_101099723_101108953_101109079_101195915_101196117_101346738
H1_mix_00067603	chr4	-	4743	14	FSM	ENSG00000138814.17	ENST00000394854.8	4743	14	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	18.6636373986087	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTGCTTGGTCTTTCTGA	-23	True	NA	1	True	AATAAA	-32	NA	101347526	101023417	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_101026062_101029165_101029196_101032266_101032365_101040481_101040567_101061086_101061162_101063231_101063358_101080531_101080627_101083185_101083264_101093775_101093916_101098366_101098513_101099610_101099723_101108953_101109079_101195915_101196117_101346738
H1_mix_00067604	chr4	-	2391	1	ISM	ENSG00000138814.17	ENST00000512215.5	4007	8	321653	25	132495	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCAGTTGATGTGAGTAT	-5	True	NA	-15	True	AATAAA	-16	NA	101025824	101023433	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_101023400_101025800
H1_mix_00067605	chr4	-	3238	8	FSM	ENSG00000138821.14	ENST00000394833.6	3238	8	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_1	34.3546925173139	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGTGTCATTTGTTAT	340	False	NA	-2	True	ATTAAA	-42	NA	102345139	102261665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_102263194_102267489_102267675_102267871_102268080_102304316_102304482_102304988_102305112_102307435_102307606_102315667_102315831_102344443
H1_mix_00067606	chr4	-	3152	9	FSM	ENSG00000138821.14	ENST00000356736.5	3152	9	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_8	74.0049618268937	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGTGTCATTTGTTAT	-3	True	NA	-2	True	ATTAAA	-42	NA	102345482	102261665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_102263194_102267489_102267675_102267871_102268080_102304316_102304482_102304988_102305112_102307435_102307606_102315667_102315831_102344443_102344916_102345344
H1_mix_00067611	chr4	-	1739	1	FSM	ENSG00000248971.2	ENST00000512037.2	1426	1	-263	-50	-263	50	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGAAGGGAGCACAGGGA	NA	False	NA	NA	False	NA	NA	NA	102730434	102728695	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_102728700_102730400
H1_mix_00067612	chr4	-	575	2	FSM	ENSG00000109323.11	ENST00000507358.1	582	2	16	-9	4	9	multi-exon	FALSE	canonical	3	24	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTATGTTGAAATCTTTT	3	True	NA	NA	False	AATGAA	-29	NA	102760978	102753681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_102753996_102760717
H1_mix_00067613	chr4	-	3866	8	FSM	ENSG00000109332.20	ENST00000453744.7	3729	8	0	-137	0	137	multi-exon	FALSE	canonical	0	0	junction_3	1198.44547269386	3872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTAGGAAATTCTTTGTA	1	True	NA	NA	False	NA	NA	NA	102827551	102794245	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826637_102827426
H1_mix_00067614	chr4	-	2371	8	FSM	ENSG00000109332.20	ENST00000394801.8	2368	8	0	-3	0	3	multi-exon	FALSE	canonical	0	0	junction_3	1498.1571400646	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGTTTGACAAGTGCT	235	False	NA	-20	True	AATAAA	-20	NA	102827948	102795972	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826637_102827591
H1_mix_00067615	chr4	-	3722	8	FSM	ENSG00000109332.20	ENST00000394803.9	2227	8	95	-1590	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1399.8698627562	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTTGGTCTTACTCGGT	-5	True	NA	-4	True	ATTAAA	-15	NA	102828064	102794385	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826637_102827943
H1_mix_00067616	chr4	-	4819	6	FSM	ENSG00000109332.20	ENST00000508474.5	4819	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1348.97955507117	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTCATGAGGCTGTGTT	NA	False	NA	-26	True	AATAAA	-19	NA	102812973	102796133	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791
H1_mix_00067617	chr4	-	1087	8	FSM	ENSG00000109332.20	ENST00000321805.11	1087	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1495.47454757645	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGGACAATAACTGCTTT	-1	True	NA	NA	False	NA	NA	NA	102827553	102797234	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826845_102827426
H1_mix_00067618	chr4	-	913	8	FSM	ENSG00000109332.20	ENST00000338145.7	896	8	0	-17	0	0	multi-exon	TRUE	canonical	0	0	junction_3	1484.59358830927	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGGACAATAACTGCTTT	17	True	NA	NA	False	NA	NA	NA	102868875	102797234	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826637_102868714
H1_mix_00067619	chr4	-	3587	8	FSM	ENSG00000109332.20	ENST00000502404.5	574	8	0	-3013	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1645.49428092942	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTTGGTCTTACTCGGT	-2	True	NA	-4	True	ATTAAA	-15	NA	102825780	102794385	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102825238_102825318_102825721
H1_mix_00067627	chr4	-	366	3	FSM	ENSG00000164037.17	ENST00000511253.1	629	3	4	259	4	-259	multi-exon	FALSE	canonical	2	4	junction_1	1	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGAATAATTAGAGCACA	NA	False	NA	NA	False	NA	NA	NA	102911537	102906535	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_102906645_102910438_102910589_102911430
H1_mix_00067630	chr4	-	2046	9	FSM	ENSG00000164039.15	ENST00000492366.5	2046	9	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_8	39.2515923243886	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGGAGAATAGTTTTTAA	-3	True	NA	-8	True	AATAAA	-15	NA	103099828	103079476	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_103079756_103082080_103082174_103082870_103082930_103085348_103086541_103091176_103091286_103092599_103092697_103095202_103095282_103096182_103096275_103099782
H1_mix_00067631	chr4	-	1183	11	NIC	ENSG00000164039.15	novel	2920	10	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	3	32	junction_9	140.140964746215	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCAGGAGAATAGTTTTTA	1	True	NA	-9	True	AATAAA	-14	NA	103099824	103079477	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_103079756_103082080_103082174_103082870_103082930_103085348_103085463_103086479_103086541_103091176_103091286_103092599_103092697_103095202_103095282_103096182_103096275_103098643_103098803_103099782
H1_mix_00067633	chr4	-	8700	48	NIC	ENSG00000138778.14	novel	8541	49	NA	NA	5	-7	combination_of_known_splicesites	FALSE	canonical	3	27	junction_32	29.1048431843547	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGAACTTTTTTGTGTGG	5	True	NA	NA	False	NA	NA	NA	103198338	103105355	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_103106317_103108802_103109090_103110827_103111012_103114454_103114553_103116576_103116690_103120147_103120334_103122870_103123090_103132692_103132897_103133694_103133893_103136140_103136360_103138350_103138450_103140255_103140415_103140813_103141105_103141749_103141909_103143247_103143407_103144330_103144619_103145049_103145335_103145522_103145682_103145828_103146108_103147355_103147647_103148843_103149000_103149117_103149409_103151218_103151378_103153046_103153251_103158299_103158459_103158613_103158887_103159009_103159325_103160624_103160780_103161085_103161252_103161334_103161458_103163136_103163257_103163478_103163554_103174735_103174904_103175959_103176049_103176898_103177047_103180310_103180470_103181336_103181457_103182761_103182892_103183200_103183289_103185809_103185862_103194228_103194295_103194373_103194442_103194602_103194685_103195113_103195234_103195919_103196039_103196162_103196253_103196758_103196851_103198263
H1_mix_00067634	chr4	-	8171	47	NIC	ENSG00000138778.14	novel	8541	49	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_31	29.2269733899179	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCGCTCTTCTATATAAT	4	True	NA	-13	True	AATAAA	-18	NA	103198339	103105810	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_103106317_103108802_103109090_103110827_103111012_103114454_103114553_103116576_103116690_103120147_103120334_103122870_103123090_103132692_103132897_103133694_103133893_103136140_103136360_103138350_103138450_103140255_103140415_103140813_103141105_103141749_103141909_103143247_103143407_103144330_103144619_103145049_103145335_103145522_103145682_103145828_103146108_103147355_103147647_103148843_103149000_103149117_103149409_103151218_103151378_103153046_103153251_103158299_103158459_103158613_103158887_103159009_103159325_103160624_103160780_103161085_103161252_103161334_103161458_103163136_103163257_103174735_103174904_103175959_103176049_103176898_103177047_103180310_103180470_103181336_103181457_103182761_103182892_103183200_103183289_103185809_103185862_103194228_103194295_103194373_103194442_103194602_103194685_103195113_103195234_103195919_103196039_103196162_103196253_103196758_103196851_103198263
H1_mix_00067635	chr4	-	8541	49	FSM	ENSG00000138778.14	ENST00000265148.9	8541	49	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_11	30.8335304047756	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCGCTCTTCTATATAAT	0	True	NA	-13	True	AATAAA	-18	NA	103198343	103105810	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_103106317_103108802_103109090_103110827_103111012_103114454_103114553_103116576_103116690_103120147_103120334_103122870_103123090_103132692_103132897_103133694_103133893_103136140_103136360_103138350_103138450_103139788_103140080_103140255_103140415_103140813_103141105_103141749_103141909_103143247_103143407_103144330_103144619_103145049_103145335_103145522_103145682_103145828_103146108_103147355_103147647_103148843_103149000_103149117_103149409_103151218_103151378_103153046_103153251_103158299_103158459_103158613_103158887_103159009_103159325_103160624_103160780_103161085_103161252_103161334_103161458_103163136_103163257_103163478_103163554_103174735_103174904_103175959_103176049_103176898_103177047_103180310_103180470_103181336_103181457_103182761_103182892_103183200_103183289_103185809_103185862_103194228_103194295_103194373_103194442_103194602_103194685_103195113_103195234_103195919_103196039_103196162_103196253_103196758_103196851_103198263
H1_mix_00067637	chr4	-	5569	3	FSM	ENSG00000168772.11	ENST00000394767.3	5569	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	4.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTCTATTTTTCCATGAT	1	True	NA	-6	True	AATAAA	-19	NA	104494894	104468307	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_104472367_104490743_104492060_104494700
H1_mix_00067640	chr4	-	1590	11	FSM	ENSG00000138777.20	ENST00000348706.9	1414	11	-3	-173	0	7	multi-exon	TRUE	canonical	3	91	junction_6	172.855691257187	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACTTTCATTTTCATACT	-2	True	NA	-9	True	AATAAA	-25	NA	105474067	105369069	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105424195_105424323_105446382_105446503_105449349_105449404_105453597_105453643_105456680_105456746_105473893
H1_mix_00067643	chr4	-	671	6	FSM	ENSG00000138777.20	ENST00000354147.7	667	6	0	-4	0	0	multi-exon	TRUE	canonical	3	27	junction_5	259.885821083029	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTTGGACATTTATTG	15	True	NA	-1	True	AATAAA	-21	NA	105474050	105369560	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105473893
H1_mix_00067644	chr4	-	1076	10	FSM	ENSG00000138777.20	ENST00000351450.10	1072	10	0	-4	0	0	multi-exon	FALSE	canonical	3	30	junction_9	199.232415925611	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTTGGACATTTATTG	-2	True	NA	-1	True	AATAAA	-21	NA	105474067	105369560	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105424195_105424323_105437949_105438037_105446382_105446503_105449349_105449404_105473893
H1_mix_00067645	chr4	-	1042	11	NIC	ENSG00000138777.20	novel	1665	12	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	50	junction_10	183.975786450283	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCCTTTGGACATTTATT	76	False	NA	-2	True	AATAAA	-20	NA	105473989	105369561	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105424195_105424323_105437949_105438037_105446382_105446503_105449349_105449404_105453597_105453643_105473893
H1_mix_00067647	chr4	-	842	8	FSM	ENSG00000138777.20	ENST00000502833.5	842	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	224.136255934844	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGTGAAGTGCATGTAACCT	6	True	NA	NA	False	NA	NA	NA	105474059	105423203	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_105423382_105424195_105424323_105437949_105438037_105446382_105446503_105449349_105449404_105453597_105453643_105456680_105456746_105473893
H1_mix_00067648	chr4	-	644	5	FSM	ENSG00000138777.20	ENST00000499847.6	631	5	0	-13	0	13	multi-exon	FALSE	canonical	3	566	junction_3	47.4150556258242	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTTCTTGGAGTCAGGC	6	True	NA	12	True	AATAAA	-31	NA	105474059	105446188	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_105446503_105449349_105449404_105453597_105453643_105456680_105456746_105473893
H1_mix_00067649	chr4	-	2245	7	NIC	ENSG00000138785.16	novel	1927	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	11	junction_6	73.6215925451826	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTATTGTTTCTTACCTT	18	True	NA	0	True	AATAAA	-17	NA	105708659	105682626	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_105683318_105686691_105686839_105691975_105692136_105693298_105693487_105695515_105695669_105699849_105700015_105707918
H1_mix_00067650	chr4	-	1718	8	FSM	ENSG00000138785.16	ENST00000340139.10	1718	8	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_7	57.3378814838953	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTATTGTTTCTTACCTT	-12	True	NA	0	True	AATAAA	-17	NA	105708689	105682626	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_105683318_105686691_105686839_105691975_105692136_105693298_105693487_105695515_105695669_105699849_105700015_105703647_105703810_105708637
H1_mix_00067651	chr4	-	1975	7	FSM	ENSG00000138785.16	ENST00000451321.6	1975	7	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_6	51.1351694585591	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTATTGTTTCTTACCTT	NA	False	NA	0	True	AATAAA	-17	NA	105709108	105682626	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_105683318_105686691_105686839_105691975_105692136_105693298_105693487_105695515_105695669_105699849_105700015_105708637
H1_mix_00067653	chr4	-	995	3	FSM	ENSG00000138785.16	ENST00000416543.5	995	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	115.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTGAAAAGGTAAAGAAGGAA	38	False	NA	NA	False	NA	NA	NA	105708639	105695559	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_105695669_105699849_105700015_105707918
H1_mix_00067654	chr4	-	7959	26	FSM	ENSG00000145348.17	ENST00000394708.7	7961	26	0	2	0	-2	multi-exon	FALSE	canonical	0	0	junction_25	23.9407936376387	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTCTGTTCTAATTGGT	-11	True	NA	NA	False	AATAAA	-12	NA	106316209	106041600	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_106046681_106095481_106095642_106116202_106116379_106171094_106171271_106193608_106193771_106194717_106194755_106212749_106212836_106230362_106230447_106231728_106231780_106232937_106233065_106233587_106233651_106235268_106235368_106236389_106236520_106236758_106236809_106242469_106242570_106244625_106244765_106247138_106247288_106248244_106248307_106248920_106248983_106250417_106250479_106251865_106252008_106260436_106260511_106262097_106262213_106295093_106295167_106308767_106308990_106315930
H1_mix_00067655	chr4	-	2826	17	FSM	ENSG00000145348.17	ENST00000510927.5	2826	17	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_11	15.7657411417922	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGGGATGTGTGTGTGTG	NA	False	NA	NA	False	AATAAA	-32	NA	106247722	106046078	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_106046681_106095481_106095642_106116202_106116379_106171094_106171271_106193608_106193771_106194717_106194755_106212749_106212836_106230362_106230447_106231728_106231780_106232937_106233065_106233587_106233651_106235268_106235368_106236389_106236520_106236758_106236809_106242469_106242570_106244625_106244765_106247138
H1_mix_00067656	chr4	-	3472	26	NIC	ENSG00000145348.17	novel	7961	26	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_25	18.112272082762	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGGGGATGTGTGTGTGT	1	True	NA	NA	False	AATAAA	-31	NA	106316197	106046079	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_106046681_106095481_106095642_106116202_106116379_106171094_106171271_106193608_106193771_106194717_106194755_106212749_106212836_106230362_106230447_106231728_106231780_106232937_106233065_106233587_106233651_106235268_106235368_106236389_106236520_106236758_106236809_106242469_106242570_106244625_106244765_106247138_106247288_106248244_106248307_106248920_106248983_106250417_106250479_106251865_106252008_106260436_106260511_106262097_106262213_106295093_106295167_106308767_106308990_106315926
H1_mix_00067661	chr4	-	1445	3	ISM	ENSG00000188517.17	ENST00000399126.1	2674	35	-200	476360	-91	1573	5prime_fragment	FALSE	canonical	3	6	junction_2	15	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAATTCCTGGCTCGCTC	NA	False	NA	NA	False	ATTAAA	-45	NA	109302843	109300235	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_109300653_109301722_109302076_109302168
H1_mix_00067663	chr4	-	1775	3	FSM	ENSG00000247950.8	ENST00000657290.1	1775	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	4	311	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGGCTGTGTTTTTTTT	787	False	NA	-20	True	ATTAAA	-5	NA	109432974	109430094	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_109430781_109431691_109431747_109431940
H1_mix_00067668	chr4	-	5392	3	FSM	ENSG00000123739.11	ENST00000507961.1	755	3	-135	-4502	-21	229	multi-exon	FALSE	canonical	3	80	junction_2	225	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAGTTGTAGAATTATC	-44	True	NA	NA	False	ATTAAA	-23	NA	109730091	109709759	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_109714496_109717547_109717714_109729601
H1_mix_00067669	chr4	-	5220	4	FSM	ENSG00000123739.11	ENST00000243501.10	5219	4	0	-1	0	1	multi-exon	FALSE	canonical	3	421	junction_2	51.3830927662225	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGTGTCATCTTTTATA	-23	True	NA	-1	True	AATAAA	-14	NA	109730070	109709987	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_109714496_109717547_109717714_109718682_109718760_109729601
H1_mix_00067670	chr4	-	6570	4	FSM	ENSG00000170522.10	ENST00000302274.8	6570	4	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_3	29.227080289044	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTTTCTGTTTTCTCTT	-15	True	NA	0	True	AATAAA	-27	NA	110198615	110045845	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_110051763_110059602_110059755_110105496_110105629_110198246
H1_mix_00067671	chr4	-	6454	5	FSM	ENSG00000170522.10	ENST00000394607.7	6454	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	124.8466559424	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTTTCTGTTTTCTCTT	-1	True	NA	0	True	AATAAA	-27	NA	110198653	110045845	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_110051763_110059602_110059755_110105496_110105629_110198246_110198368_110198521
H1_mix_00067673	chr4	-	2304	3	FSM	ENSG00000164093.18	ENST00000644743.1	2294	3	0	-10	0	10	multi-exon	FALSE	canonical	3	18	junction_2	4.5	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTCTCCCCTCCTCTGT	-4	True	NA	1	True	AGTAAA	-27	NA	110623077	110617412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_110618689_110621163_110621370_110622255
H1_mix_00067675	chr4	-	1889	2	FSM	ENSG00000164093.18	ENST00000557119.2	1889	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCTTTGCTGTTAAAAAAA	55	False	NA	NA	False	AAAACA	-28	NA	110623051	110620276	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_110621370_110622255
H1_mix_00067678	chr4	-	4146	2	FSM	ENSG00000145365.11	ENST00000361717.4	4163	2	0	17	0	-17	multi-exon	FALSE	canonical	3	40	junction_1	0	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATATTATTAAGATAACAG	2	True	NA	-17	True	NA	NA	NA	112285904	112274553	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_112278435_112285639
H1_mix_00067680	chr4	-	3095	16	FSM	ENSG00000138658.16	ENST00000445413.6	3089	16	0	-6	0	0	multi-exon	FALSE	canonical	3	18	junction_5	28.0480540026101	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTGTTTGCCAAAGAAAT	NA	False	NA	1	True	AATAAA	-27	NA	112587750	112539332	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_112539690_112539862_112540125_112540820_112540956_112541091_112541269_112547284_112547409_112553834_112553983_112554704_112554783_112558149_112558310_112560732_112560996_112562370_112562486_112563130_112563275_112581662_112581803_112583977_112584175_112585540_112585726_112586444_112586584_112587279
H1_mix_00067682	chr4	-	2279	10	FSM	ENSG00000138658.16	ENST00000506675.1	2279	10	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_5	24.2751714848172	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTAAACACATGTAAAAATT	NA	False	NA	-95	True	ATTAAA	-22	NA	112561538	112539428	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_112539690_112539862_112540125_112540820_112540956_112541091_112541269_112547284_112547409_112548252_112548381_112553834_112553983_112554704_112554783_112558149_112558310_112560732
H1_mix_00067687	chr4	-	294	2	FSM	ENSG00000249532.6	ENST00000505215.2	336	2	37	5	-3	0	multi-exon	FALSE	canonical	3	15732	junction_1	0	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATATTGTTTCTGTGCCAG	-2	True	NA	-18	True	AATAAA	-13	NA	112648703	112646724	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_112646969_112648653
H1_mix_00067688	chr4	-	1109	2	FSM	ENSG00000250046.3	ENST00000505632.1	740	2	-53	-316	-53	316	multi-exon	FALSE	canonical	3	111	junction_1	0	228	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTTGTATTCTTGTGTT	NA	False	NA	NA	False	AATAAA	-31	NA	112706863	112692730	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_112693686_112706709
H1_mix_00067689	chr4	-	864	1	FSM	ENSG00000241741.1	ENST00000482859.1	796	1	-12	-56	-12	56	mono-exon	FALSE	NA	NA	NA	NA	NA	1197	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAAAGAAATACATTGGGT	8	False	NA	NA	False	ATTAAA	-17	NA	112788890	112788026	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_112788000_112788900
H1_mix_00067690	chr4	-	472	1	FSM	ENSG00000196656.7	ENST00000485827.1	348	1	-30	-94	-30	94	mono-exon	FALSE	NA	NA	NA	NA	NA	1251	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACAGCATTTTGTCGTT	NA	False	NA	NA	False	AATAAA	-43	NA	113214423	113213951	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_113214000_113214400
H1_mix_00067691	chr4	-	5295	18	FSM	ENSG00000145349.18	ENST00000394524.7	5294	18	0	-1	0	1	multi-exon	FALSE	canonical	3	83	junction_1	15.6488278522319	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCATGGCTCTGTGGTCT	1	True	NA	-5	True	AATAAA	-22	NA	113761445	113451030	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_113454516_113457334_113457564_113460146_113460242_113465528_113465605_113500462_113500512_113509637_113509676_113513327_113513371_113513829_113513914_113515068_113515192_113517562_113517658_113531215_113531300_113537340_113537444_113548656_113548730_113552030_113552097_113609151_113609207_113661712_113661773_113759319_113759415_113761003
H1_mix_00067692	chr4	-	5821	18	FSM	ENSG00000145349.18	ENST00000296402.9	5820	18	0	-1	0	1	multi-exon	FALSE	canonical	3	14	junction_1	28.548750268068	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCATGGCTCTGTGGTCT	692	False	NA	-5	True	AATAAA	-22	NA	113761927	113451030	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_113454516_113457290_113457564_113460146_113460242_113465528_113465605_113500462_113500512_113509637_113509676_113513327_113513371_113513829_113513914_113515068_113515192_113517562_113517658_113531215_113531300_113537340_113537444_113548656_113548730_113552030_113552097_113609151_113609207_113661712_113661773_113759319_113759415_113761003
H1_mix_00067693	chr4	-	8920	17	FSM	ENSG00000145349.18	ENST00000379773.6	1642	17	-1122	-6156	-325	0	multi-exon	FALSE	canonical	3	95	junction_3	12.8640730330638	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTCATGGCTCTGTGGTC	367	False	NA	-6	True	AATAAA	-21	NA	113762252	113451031	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_113457564_113460146_113460242_113465528_113465605_113500462_113500512_113509637_113509676_113513327_113513371_113513829_113513914_113515068_113515192_113517562_113517658_113531215_113531300_113537340_113537444_113548656_113548730_113552030_113552097_113609151_113609207_113661712_113661773_113759319_113759415_113761003
H1_mix_00067695	chr4	-	3458	1	FSM	ENSG00000174599.5	ENST00000310754.5	2023	1	27	-1462	27	1462	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTACAAATGAAATTTAGC	14	True	NA	NA	False	AATAAA	-41	NA	117085549	117082091	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_117082100_117085500
H1_mix_00067696	chr4	-	1322	1	FSM	ENSG00000213492.2	ENST00000441170.1	1663	1	82	259	17	-259	mono-exon	FALSE	NA	NA	NA	NA	NA	461	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTGGAAATTTTAAAATA	NA	False	NA	NA	False	NA	NA	NA	117576092	117574770	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_117574800_117576100
H1_mix_00067699	chr4	-	4111	23	NNC	ENSG00000150961.15	novel	4018	23	NA	NA	-45	0	at_least_one_novel_splicesite	TRUE	canonical	3	94	junction_18	88.1891749508544	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTAGATTTATTTATTT	2443	False	NA	-2	True	AATAAA	-19	NA	118836216	118722822	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_118723656_118728560_118728651_118731315_118731508_118732732_118732913_118738260_118738380_118739148_118739288_118740662_118740809_118740940_118741038_118743987_118744159_118744943_118745061_118751995_118752090_118752696_118752889_118757720_118757846_118764801_118764918_118768172_118768312_118797682_118797811_118805842_118805955_118815027_118815159_118815450_118815727_118817263_118817413_118824619_118824750_118833578_118833738_118835940
H1_mix_00067700	chr4	-	359	2	FSM	ENSG00000150961.15	ENST00000502526.1	351	2	0	-8	0	8	multi-exon	FALSE	canonical	3	426	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTATAGCCAACATTTA	NA	False	NA	NA	False	GGGGCT	-10	NA	118739223	118738095	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_118738380_118739148
H1_mix_00067710	chr4	-	2092	4	FSM	ENSG00000164109.14	ENST00000333047.9	1277	4	0	-815	0	815	multi-exon	FALSE	canonical	3	64	junction_2	593.265164623337	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTATTCTGTCGCCCAG	-11	True	NA	NA	False	ACTAAA	-33	NA	120066833	120058621	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_120060291_120060873_120060978_120065671_120065819_120066661
H1_mix_00067713	chr4	-	210	2	FSM	ENSG00000138738.11	ENST00000513741.1	210	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATGACATCCTATGAGA	NA	False	NA	NA	False	AAAAAG	-2	NA	120710411	120684918	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_120685026_120710308
H1_mix_00067714	chr4	-	2338	15	FSM	ENSG00000138738.11	ENST00000428209.6	2338	15	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_10	12.1573442991536	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCTCTGTAATGAAGTTT	-9	True	NA	-49	True	TATAAA	-36	NA	120922858	120694822	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_120695276_120710308_120710414_120754552_120754639_120777187_120777282_120781142_120781304_120784997_120785092_120798266_120798425_120799660_120799746_120811369_120811450_120816452_120816575_120818352_120818528_120821170_120821346_120853417_120853541_120907473_120907558_120922515
H1_mix_00067715	chr4	-	532	2	FSM	ENSG00000138738.11	ENST00000507611.1	535	2	3	0	3	0	multi-exon	FALSE	canonical	3	51	junction_1	0	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATGTTGATTATTAAAAT	NA	False	NA	NA	False	NA	NA	NA	120821345	120818170	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_120818528_120821170
H1_mix_00067717	chr4	-	2913	4	FSM	ENSG00000173376.14	ENST00000379692.9	2902	4	0	-11	0	11	multi-exon	FALSE	canonical	3	9	junction_2	5.09901951359278	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTCAATTTCTAATCTGT	-4	True	NA	16	True	NA	NA	NA	121072535	121035601	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_121037658_121039929_121040055_121045649_121045839_121071992
H1_mix_00067718	chr4	-	2349	6	FSM	ENSG00000186867.11	ENST00000394427.3	2339	6	0	-10	0	10	multi-exon	FALSE	canonical	2	5	junction_4	3.26190128606002	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGATTGAATAAGAAAATAA	-4	True	NA	NA	False	NA	NA	NA	121381018	121328631	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_121329715_121330425_121330524_121332820_121333057_121336806_121336869_121340451_121340611_121380307
H1_mix_00067719	chr4	-	911	2	FSM	ENSG00000186867.11	ENST00000512235.1	1230	2	0	319	0	-319	multi-exon	FALSE	canonical	3	9	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGCCACTGGATGTGCC	NA	False	NA	NA	False	AATACA	-28	NA	121381059	121340451	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_121340611_121380307
H1_mix_00067720	chr4	-	1638	13	FSM	ENSG00000164111.15	ENST00000296511.10	1638	13	0	0	0	0	multi-exon	FALSE	canonical	3	2152	junction_4	199.186871360093	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTCTTTTTAAGCTAATAA	-7	True	NA	43	True	ATTAAA	-17	NA	121696980	121667945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_121668528_121669601_121669725_121669953_121670013_121671546_121671643_121672532_121672627_121677893_121677951_121678414_121678495_121681670_121681762_121683363_121683478_121684676_121684772_121686287_121686373_121696580_121696625_121696862
H1_mix_00067721	chr4	-	1083	6	FSM	ENSG00000164111.15	ENST00000509648.5	1083	6	0	0	0	0	multi-exon	FALSE	canonical	3	2152	junction_4	182.659245591347	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAAGTTTAATGCCTGGC	8040	False	NA	-38	True	ACTAAA	-14	NA	121678322	121668245	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_121668528_121669601_121669725_121669953_121670013_121671546_121671643_121672532_121672627_121677893
H1_mix_00067722	chr4	-	1036	9	FSM	ENSG00000164111.15	ENST00000511552.5	1036	9	0	0	0	0	multi-exon	FALSE	canonical	3	2152	junction_1	229.272456642746	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGATTTCAAATTGAGGAAA	-2	True	NA	NA	False	NA	NA	NA	121696975	121671617	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_121671643_121672532_121672627_121677893_121677951_121678414_121678495_121681670_121681762_121683363_121683478_121684676_121684772_121686287_121686373_121696580
H1_mix_00067725	chr4	-	3888	19	FSM	ENSG00000138686.10	ENST00000264499.9	3840	19	24	-72	0	72	multi-exon	FALSE	canonical	3	36	junction_1	78.7098320054171	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAAGCTAACTAGACGTC	15	True	NA	NA	False	AAAAAG	-3	NA	121870450	121824256	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_121825994_121828145_121828270_121828401_121828506_121828618_121828729_121833230_121833396_121835143_121835284_121839630_121839697_121843926_121844002_121845503_121845697_121847403_121847507_121848843_121848929_121852955_121853087_121854703_121854821_121855488_121855562_121858991_121859179_121861503_121861680_121863216_121863280_121867980_121868047_121870277
H1_mix_00067726	chr4	-	2570	18	FSM	ENSG00000138686.10	ENST00000506636.1	2570	18	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_12	79.431718625971	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTGTGTCAATTTAT	15	True	NA	-2	True	AATAAA	-13	NA	121870450	121827726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_121828270_121828401_121828506_121828618_121828729_121833230_121833396_121835143_121835284_121839630_121839697_121843926_121844002_121845503_121845697_121847403_121847507_121848843_121848929_121852955_121853087_121854703_121854821_121855488_121855562_121858991_121859179_121861503_121861680_121863216_121863280_121867980_121868047_121870277
H1_mix_00067729	chr4	-	1227	5	FSM	ENSG00000170917.14	ENST00000304430.10	1227	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	42.204117097743	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTTTGTTATTTTTCTT	-16	True	NA	65	True	TATAAA	-20	NA	122922597	122892576	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_122893226_122897623_122897679_122912567_122912624_122917500_122917705_122922334
H1_mix_00067730	chr4	-	1065	5	FSM	ENSG00000170917.14	ENST00000339154.6	1065	5	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	25.3968501984006	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGCTCTAGGTAAGCTT	-14	True	NA	-2	True	AATAAA	-19	NA	122922968	122892643	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_122893226_122897623_122897679_122912567_122912624_122917500_122917705_122922800
H1_mix_00067734	chr4	-	432	3	Intergenic	novelGene_1101	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	27.5	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACCCATGCCCTAGAAGT	NA	False	NA	NA	False	NA	NA	NA	125565075	125511956	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_-_125512009_125561583_125561708_125564819
H1_mix_00067735	chr4	-	655	3	FSM	ENSG00000250945.1	ENST00000506852.1	648	3	0	-7	0	7	multi-exon	FALSE	canonical	0	0	junction_1	0.5	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTATGGATCACCAATTT	NA	False	NA	NA	False	AATAAA	-20	NA	127077762	127043422	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_127043935_127073775_127073891_127077734
H1_mix_00067737	chr4	-	560	1	FSM	ENSG00000244021.4	ENST00000491435.2	481	1	-29	-50	-29	50	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAACAAAACAAAAACAA	NA	False	NA	NA	False	AATAAA	-25	NA	127813229	127812669	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_127812700_127813200
H1_mix_00067738	chr4	-	378	1	FSM	ENSG00000261668.1	ENST00000565254.1	3843	1	36	3429	36	-3429	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATCCCTAGTGGAAAGGTG	NA	False	NA	NA	False	NA	NA	NA	127844004	127843626	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_127843600_127844000
H1_mix_00067740	chr4	-	3218	13	FSM	ENSG00000164073.11	ENST00000641434.1	3209	13	0	-9	0	0	multi-exon	FALSE	canonical	3	5	junction_1	30.9258746395671	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGAAGACTTATTTGTAA	-12	True	NA	-103	True	AATAGA	-42	NA	127965171	127917888	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_127919339_127920456_127920837_127921523_127921772_127921859_127921964_127930682_127930818_127932984_127933094_127938782_127938839_127939852_127939998_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965071
H1_mix_00067741	chr4	-	4860	10	FSM	ENSG00000164073.11	ENST00000641482.1	4860	10	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	28.4661375612204	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTTGAGAAGAAATTCT	11	True	NA	NA	False	GATAAA	-35	NA	127965148	127917924	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_127921772_127930682_127930818_127932984_127933094_127938782_127938839_127939852_127939998_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965071
H1_mix_00067743	chr4	-	1865	11	FSM	ENSG00000164073.11	ENST00000641742.1	1823	11	34	-76	0	0	multi-exon	FALSE	canonical	3	21	junction_6	30.5122926047847	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACACCTACTTTTTATTTA	14	True	NA	NA	False	TTTAAA	-32	NA	127965145	127920188	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_127920837_127921523_127921772_127921859_127921964_127930682_127930818_127932984_127933094_127938782_127938839_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965071
H1_mix_00067745	chr4	-	3644	3	FSM	ENSG00000164040.18	ENST00000613358.4	3783	3	138	1	138	-1	multi-exon	FALSE	canonical	3	537	junction_2	37	195	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGAATGTTTCTCATTCT	235	False	NA	-1	True	AATAAA	-30	NA	128288684	128269237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_128271414_128272361_128272518_128287372
H1_mix_00067747	chr4	-	3234	6	FSM	ENSG00000151466.12	ENST00000506368.5	2096	6	-162	-976	0	976	multi-exon	FALSE	canonical	3	17	junction_1	23.2980685894775	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGTCATTTTTTATTTT	929	False	129093561	NA	False	AGTAAA	-17	NA	129093539	129035618	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_129038127_129039040_129039097_129043394_129043468_129043992_129044052_129082305_129082374_129093069
H1_mix_00067748	chr4	-	1736	5	FSM	ENSG00000151466.12	ENST00000511426.5	1696	5	-55	15	0	-15	multi-exon	FALSE	canonical	3	24	junction_1	22.6646751576104	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTATCTGTAAACTAGT	-2	True	NA	NA	False	AATAAA	-10	NA	129093600	129039207	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_129040213_129043394_129043468_129043992_129044052_129082305_129082374_129093069
H1_mix_00067751	chr4	-	1205	8	FSM	ENSG00000250241.7	ENST00000659189.1	1205	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	7.07106781186548	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATGACAAAGAGGCCAAAAC	1882	False	NA	NA	False	NA	NA	NA	133149094	133110267	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_133110911_133138959_133139034_133139825_133139882_133140585_133140660_133142710_133142783_133145603_133145746_133147198_133147277_133149028
H1_mix_00067754	chr4	-	5065	2	FSM	ENSG00000254535.4	ENST00000421491.4	4985	2	-80	0	-80	0	multi-exon	FALSE	canonical	3	11	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGTTTGAAAATGATTTT	35	False	NA	NA	False	AATAAA	-23	NA	134201869	134196332	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_134201246_134201717
H1_mix_00067755	chr4	-	269	1	FSM	ENSG00000241411.1	ENST00000459634.1	631	1	477	-115	477	115	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAAAATGATGGG	NA	False	NA	NA	False	AATAAA	-23	NA	134952412	134952143	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_134952100_134952400
H1_mix_00067757	chr4	-	5102	4	FSM	ENSG00000189184.12	ENST00000412923.6	5102	4	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_3	31.6262900483478	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAAGGAACTGTCTATAAG	26	True	NA	-17	True	AATAAA	-18	NA	137532459	137519702	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_137521697_137528477_137528642_137528731_137528818_137529601
H1_mix_00067760	chr4	-	4522	10	FSM	ENSG00000109381.21	ENST00000394235.6	4012	10	0	-510	0	510	multi-exon	FALSE	canonical	3	95	junction_6	37.2024823279042	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTCTACTAAAAATACAAAAA	-7	True	NA	NA	False	NA	NA	NA	139177218	139056709	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_139059608_139060323_139060675_139061864_139062058_139067683_139067771_139071865_139072004_139073453_139073568_139125163_139125330_139137629_139137868_139139412_139139498_139176966
H1_mix_00067761	chr4	-	4143	7	FSM	ENSG00000109381.21	ENST00000358635.7	3036	7	38	-1145	38	510	multi-exon	FALSE	canonical	3	63	junction_6	49.2803769826851	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTCTACTAAAAATACAAAAA	NA	False	NA	NA	False	NA	NA	NA	139084458	139056709	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_139059608_139060323_139060675_139061864_139062058_139067683_139067771_139071865_139072040_139073453_139073568_139084132
H1_mix_00067765	chr4	-	1965	7	FSM	ENSG00000109381.21	ENST00000510408.5	1965	7	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_6	47.8553956089477	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTCACTACGATATCAAG	6	True	NA	NA	False	AAAAAG	-18	NA	139084325	139058718	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_139059608_139060323_139060675_139061864_139062058_139067683_139067771_139071865_139072004_139073453_139073568_139084132
H1_mix_00067766	chr4	-	445	1	FSM	ENSG00000179967.11	ENST00000509033.1	445	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTCCCCGACCCAGGAGAA	NA	False	NA	NA	False	NA	NA	NA	139115374	139114929	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_139114900_139115400
H1_mix_00067769	chr4	-	628	6	FSM	ENSG00000109390.13	ENST00000503997.5	628	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	1509.83821649871	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCACAGCAGTCAGTGCT	4	True	NA	NA	False	CATAAA	-42	NA	139295815	139266879	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_139267042_139268671_139268766_139275288_139275393_139292529_139292610_139295042_139295147_139295731
H1_mix_00067770	chr4	-	1204	5	FSM	ENSG00000109390.13	ENST00000539002.5	1198	5	0	-6	0	6	multi-exon	FALSE	canonical	3	54	junction_4	1338.35206504118	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATGTTAATTCTAAGGT	1312	False	NA	8	True	GATAAA	-21	NA	139301210	139289910	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_139290093_139292529_139292610_139295042_139295147_139295731_139295961_139300601
H1_mix_00067771	chr4	-	712	6	FSM	ENSG00000109390.13	ENST00000394223.2	696	6	0	-16	0	2	multi-exon	FALSE	canonical	2	8	junction_5	1535.81241041997	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAGAAAATGTTAATTCTA	10	True	NA	4	True	AATAAA	-42	NA	139302477	139289914	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_139290093_139292529_139292610_139295042_139295147_139295731_139295961_139297384_139297444_139302415
H1_mix_00067772	chr4	-	731	5	FSM	ENSG00000109390.13	ENST00000539387.5	725	5	0	-6	0	6	multi-exon	FALSE	canonical	3	161	junction_4	1292.0734063899	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATGTTAATTCTAAGGT	NA	False	NA	8	True	GATAAA	-21	NA	139302551	139289910	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_139290093_139292529_139292610_139295042_139295147_139295731_139295961_139302415
H1_mix_00067775	chr4	-	2778	3	FSM	ENSG00000273247.6	ENST00000609359.1	627	3	-291	-1860	-291	-37	multi-exon	FALSE	canonical	3	8	junction_2	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGCTTCAAAATTAATCT	NA	False	NA	-9	True	ATTAAA	-21	NA	139454325	139411963	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_139414025_139415936_139416013_139453684
H1_mix_00067777	chr4	-	6815	8	FSM	ENSG00000145391.14	ENST00000274031.8	6808	8	0	-7	0	7	multi-exon	FALSE	canonical	3	14	junction_5	6.88387645894672	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTTCCTTTGGTCATCT	3	True	NA	2	True	ATTAAA	-23	NA	139556219	139506030	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_139511844_139517884_139518043_139520276_139520395_139523353_139523436_139529030_139529221_139533164_139533367_139546919_139547050_139556097
H1_mix_00067778	chr4	-	1773	3	FSM	ENSG00000145391.14	ENST00000404104.7	1590	3	-80	-103	-80	103	multi-exon	FALSE	canonical	3	18	junction_1	9	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTTATCTTTATTTTAT	550	False	NA	NA	False	AATACA	-10	NA	139556849	139532475	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_139533367_139546919_139547050_139556097
H1_mix_00067781	chr4	-	426	3	FSM	ENSG00000196951.12	ENST00000608178.6	478	3	25	27	3	-27	multi-exon	FALSE	canonical	3	51	junction_1	7.5	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGGCTGAATAAACGAGTG	12	True	NA	NA	False	NA	NA	NA	140373381	140360708	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_140360975_140369309_140369351_140373262
H1_mix_00067784	chr4	-	10405	7	FSM	ENSG00000170153.11	ENST00000515673.7	10432	7	27	0	20	0	multi-exon	FALSE	canonical	3	9	junction_3	2.92498812913071	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTGTCTGTGTCATCT	23	True	NA	-14	True	AATAAA	-12	NA	141133442	140859806	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_140868380_140911143_140911355_140925976_140926074_140947653_140947737_140949300_140949373_140967622_140967874_141132324
H1_mix_00067786	chr4	-	1636	3	FSM	ENSG00000248810.3	ENST00000652978.1	1741	3	98	7	12	-7	multi-exon	FALSE	canonical	0	0	junction_2	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATAATATTCTTTCATTT	10	False	NA	NA	False	AATAAA	-18	NA	141332605	141322540	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_141323619_141324801_141324913_141332158
H1_mix_00067794	chr4	-	1680	6	NIC	ENSG00000164162.14	novel	963	7	NA	NA	0	210	combination_of_known_junctions	FALSE	canonical	2	10	junction_2	104.660594303682	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTTTGCTTTATTCTGG	21	True	NA	NA	False	ATTAAA	-24	NA	145098183	144994364	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_144995604_144999256_144999295_145064571_145064693_145081659_145081751_145095984_145096112_145098119
H1_mix_00067795	chr4	-	1658	5	FSM	ENSG00000164162.14	ENST00000309439.9	868	5	3	-793	3	210	multi-exon	FALSE	canonical	3	48	junction_4	79.8342031963744	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTTTGCTTTATTCTGG	-6	True	NA	NA	False	ATTAAA	-24	NA	145098210	144994364	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_144995604_145064571_145064693_145081659_145081751_145095984_145096112_145098130
H1_mix_00067796	chr4	-	1444	5	FSM	ENSG00000164162.14	ENST00000507656.6	1444	5	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	35.202095108104	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGGAAATGTGGTTTTT	8	True	NA	NA	False	ATTAAA	-15	NA	145098196	144994575	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_144995604_145064571_145064693_145081659_145081751_145095984_145096112_145098119
H1_mix_00067798	chr4	-	687	4	FSM	ENSG00000164162.14	ENST00000511466.5	687	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	106.615612782035	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATGTAATAAAGCTCACAT	13	True	NA	NA	False	AATAAA	-31	NA	145098191	144995195	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_144995604_145081659_145081751_145095984_145096112_145098130
H1_mix_00067804	chr4	-	6742	14	FSM	ENSG00000151612.18	ENST00000655597.2	6742	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_13	12.9879324964578	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTTTCTTTTTCTTTT	NA	False	NA	NA	False	ATTAAA	-22	NA	145902737	145757626	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_145761599_145763401_145763469_145764987_145765166_145765546_145765739_145774505_145774673_145775788_145775961_145779373_145779512_145823421_145823526_145845955_145846014_145849321_145849562_145870244_145870479_145885677_145886159_145892242_145892410_145902165
H1_mix_00067807	chr4	-	1418	1	FSM	ENSG00000279481.1	ENST00000623323.1	2525	1	-232	1339	-232	-1339	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCCGTCCTTTTTCCTCCT	2929	False	NA	NA	False	NA	NA	NA	145833212	145831794	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_145831800_145833200
H1_mix_00067812	chr4	-	3461	12	FSM	ENSG00000164169.13	ENST00000322396.7	3461	12	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_9	27.0432772232806	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTGCGTGCTCTTTGTA	-21	True	NA	NA	False	AATAAA	-25	NA	147684163	147637784	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_147638748_147638959_147639083_147642786_147642941_147653851_147654567_147657791_147657976_147660845_147661039_147668538_147668646_147670640_147670744_147672958_147673127_147673637_147673875_147680322_147680472_147683798
H1_mix_00067814	chr4	-	10353	58	FSM	ENSG00000198589.14	ENST00000357115.9	10353	58	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_19	62.1350409333433	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGATTCAGTCCTAGTTT	-1	True	NA	-5	True	AATAAA	-32	NA	151015727	150264434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_150265813_150277852_150278005_150282449_150282647_150285932_150286035_150302624_150302793_150310228_150310385_150315560_150315624_150321190_150321369_150325808_150325899_150349991_150350160_150415437_150415591_150435588_150435709_150436723_150436865_150467672_150467786_150471623_150471740_150487731_150487835_150490917_150491036_150588047_150588185_150590712_150590860_150597082_150597116_150599006_150599132_150683550_150683718_150735257_150735367_150761782_150761848_150798080_150798143_150806270_150806405_150808319_150808399_150817123_150817258_150828179_150828622_150831816_150831977_150844099_150844208_150844657_150844780_150848817_150848999_150849421_150849576_150850723_150850903_150851884_150852944_150867670_150867864_150868181_150868306_150870524_150870607_150871344_150871454_150872662_150872756_150893051_150893150_150896393_150896457_150897738_150897819_150900048_150900218_150905837_150905991_150906296_150906406_150908333_150908468_150908659_150908858_150914194_150914342_150915607_150915728_150916400_150916528_150916616_150916739_150921197_150921294_150928515_150928617_150928833_150929066_151014426_151014862_151015472
H1_mix_00067816	chr4	-	7321	39	FSM	ENSG00000198589.14	ENST00000651695.1	7321	39	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_8	47.0047147985859	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCATAAATAAATTCTTTGT	NA	False	NA	-58	True	NA	NA	NA	150871425	150264688	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_150265813_150277852_150278005_150282449_150282647_150285932_150286035_150302624_150302793_150310228_150310385_150315560_150315624_150321190_150321384_150325808_150325899_150349991_150350160_150415437_150415591_150435588_150435709_150436723_150436865_150467672_150467786_150471623_150471740_150487731_150487835_150490917_150491036_150588047_150588185_150590712_150590860_150599006_150599132_150683550_150683718_150735257_150735367_150761782_150761848_150798080_150798143_150806270_150806405_150808319_150808399_150817123_150817258_150828179_150828622_150831816_150831977_150844099_150844208_150844657_150844780_150848817_150848999_150849421_150849576_150850723_150850903_150851884_150852944_150867670_150867864_150868181_150868306_150870524_150870607_150871344
H1_mix_00067817	chr4	-	10332	58	NNC	ENSG00000198589.14	novel	10353	58	NA	NA	-33941	-7	at_least_one_novel_splicesite	TRUE	canonical	3	39	junction_56	54.0407037409647	858	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAAACTCTGATTCAGTC	6193	False	NA	-12	True	AATAAA	-25	NA	151049668	150264441	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_150265813_150277852_150278005_150282449_150282647_150285932_150286035_150302624_150302793_150310228_150310385_150315560_150315624_150321190_150321369_150325808_150325899_150349991_150350160_150415437_150415591_150435588_150435709_150436723_150436865_150467672_150467786_150471623_150471740_150487731_150487835_150490917_150491036_150588047_150588185_150590712_150590860_150599006_150599132_150683550_150683718_150735257_150735367_150761782_150761848_150798080_150798143_150806270_150806405_150808319_150808399_150817123_150817258_150828179_150828622_150831816_150831977_150844099_150844208_150844657_150844780_150848817_150848999_150849421_150849576_150850723_150850903_150851884_150852944_150867670_150867864_150868181_150868306_150870524_150870607_150871344_150871454_150872662_150872756_150893051_150893150_150896393_150896457_150897738_150897819_150900048_150900218_150905837_150905991_150906296_150906406_150908333_150908468_150908659_150908858_150914194_150914342_150915607_150915728_150916400_150916528_150916616_150916739_150921197_150921294_150928515_150928617_150928833_150929066_151014426_151014862_151049349_151049387_151049431
H1_mix_00067819	chr4	-	4912	20	FSM	ENSG00000109686.19	ENST00000409252.6	4888	20	0	-24	0	19	multi-exon	FALSE	canonical	3	87	junction_9	59.5086995199824	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTGAGAATGGAGGTGG	1857	False	NA	19	True	AATAAA	-43	NA	151226066	151120259	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_151122208_151127617_151127716_151128169_151128357_151132330_151132384_151133033_151133237_151135073_151135133_151137731_151137863_151139774_151139848_151143909_151144051_151144219_151144289_151147921_151148187_151149499_151149562_151159239_151159353_151165588_151165697_151174669_151175675_151176533_151176688_151176816_151176956_151179354_151179398_151187422_151187464_151226046
H1_mix_00067820	chr4	-	5487	20	FSM	ENSG00000109686.19	ENST00000604030.7	5207	20	-280	0	-280	0	multi-exon	FALSE	canonical	3	179	junction_9	33.0358656773609	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTCTCATACTAGACTGA	NA	False	NA	-2	True	AATAAA	-22	NA	151325885	151120280	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_151122208_151127617_151127716_151128169_151128357_151132330_151132384_151133033_151133237_151135073_151135133_151137731_151137863_151139774_151139848_151143909_151144051_151147921_151148187_151149499_151149562_151159239_151159353_151165588_151165697_151174669_151175675_151176533_151176688_151176816_151176956_151179354_151179398_151187422_151187464_151226046_151226087_151325240
H1_mix_00067821	chr4	-	5327	19	NIC	ENSG00000109686.19	novel	5207	20	NA	NA	-158	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_14	80.9953511849924	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCCCTTTCTCATACTA	NA	False	NA	-8	True	AATAAA	-16	NA	151325763	151120286	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_151122208_151127617_151127716_151128169_151128357_151132330_151132384_151133033_151133237_151135073_151135133_151137731_151137863_151139774_151139848_151143909_151144051_151147921_151148187_151149499_151149562_151159239_151159353_151165588_151165697_151174669_151175675_151176524_151176688_151176816_151176956_151179354_151179398_151226046_151226087_151325240
H1_mix_00067822	chr4	-	5268	21	NIC	ENSG00000109686.19	novel	5207	20	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	87	junction_9	58.0324047407998	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGTCCCTTTCTCATAC	9	True	NA	-10	True	AATAAA	-14	NA	151325605	151120288	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_151122208_151127617_151127716_151128169_151128357_151132330_151132384_151133033_151133237_151135073_151135133_151137731_151137863_151139774_151139848_151143909_151144051_151144219_151144289_151147921_151148187_151149499_151149562_151159239_151159353_151165588_151165697_151174669_151175675_151176533_151176688_151176816_151176956_151179354_151179398_151187422_151187464_151226046_151226087_151325240
H1_mix_00067823	chr4	-	5048	19	NIC	ENSG00000109686.19	novel	5207	20	NA	NA	116	0	combination_of_known_splicesites	FALSE	canonical	1	7	junction_18	66.6878901402498	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCTTTCTCATACTAGAC	44	True	NA	-5	True	AATAAA	-19	NA	151325489	151120283	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_151122208_151127617_151127716_151128169_151128357_151132330_151132384_151133033_151133237_151135073_151135133_151137731_151137863_151139774_151139848_151143909_151144051_151147921_151148187_151149499_151149562_151159239_151159353_151165588_151165697_151174669_151175675_151176533_151176688_151176816_151176956_151179354_151179398_151187422_151187464_151325240
H1_mix_00067826	chr4	-	3698	2	FSM	ENSG00000059691.12	ENST00000510396.1	3745	2	47	0	47	0	multi-exon	FALSE	canonical	2	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTTTCATTCTGCAGT	NA	False	NA	-4	True	AATAAA	-34	NA	151675841	151670837	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_151671303_151672608
H1_mix_00067827	chr4	-	5778	12	FSM	ENSG00000109670.16	ENST00000603548.6	5653	12	-44	-81	-15	81	multi-exon	FALSE	canonical	3	29	junction_11	18.3523817897125	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATCCAGTAATCTCAACTA	-27	True	NA	NA	False	NA	NA	NA	152536107	152320462	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_152323150_152324183_152324395_152326005_152326232_152328207_152328390_152329671_152329786_152330731_152330869_152332595_152332720_152337801_152337937_152346929_152347072_152350041_152350125_152411302_152411873_152534940
H1_mix_00067828	chr4	-	5603	13	ISM	ENSG00000109670.16	ENST00000281708.10	5639	14	29	100	0	-100	intron_retention	FALSE	canonical	3	23	junction_11	23.7046350366805	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGACTGTTCTGTAGCC	17	True	NA	NA	False	ACTAAA	-39	NA	152536063	152320643	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_152323150_152324183_152324395_152326005_152326232_152328207_152328390_152329671_152329786_152330731_152330869_152332595_152332720_152337801_152337937_152346929_152347072_152350041_152350125_152411302_152411873_152412479_152412530_152534940
H1_mix_00067831	chr4	-	911	4	FSM	ENSG00000109670.16	ENST00000604872.6	921	4	0	10	0	-10	multi-exon	FALSE	canonical	3	23	junction_1	6.48074069840786	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTCTTACAGAAGGTAATG	889	False	NA	NA	False	AATAAA	-14	NA	152535191	152411169	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_152411873_152412479_152412530_152534940_152535034_152535126
H1_mix_00067833	chr4	-	6693	7	FSM	ENSG00000170006.12	ENST00000304385.8	10534	7	0	3841	0	-3841	multi-exon	FALSE	canonical	1	3	junction_1	0.471404520791032	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATTTGTTTACTAAAATG	5	True	NA	NA	False	AATAAA	-18	NA	152679997	152622468	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_152628562_152640927_152640986_152643087_152643174_152644414_152644443_152652537_152652577_152652666_152652928_152679869
H1_mix_00067838	chr4	-	1230	7	NIC	ENSG00000145428.15	novel	1358	9	NA	NA	-169	0	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_1	26.1369257734893	2429	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGTTTCTTAACTCATG	-10	True	NA	NA	False	AATAAA	-34	NA	153760193	153710159	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_153710490_153712474_153712577_153715528_153715663_153720183_153720305_153723350_153723459_153751437_153751476_153759796
H1_mix_00067839	chr4	-	1996	3	FSM	ENSG00000145423.5	ENST00000274063.5	1996	3	0	0	0	0	multi-exon	FALSE	canonical	3	1464	junction_1	10.5	718	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGTCTTCTGTCTTGT	-9	True	NA	-3	True	TATAAA	-22	NA	153789083	153780590	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_153781756_153785863_153785945_153788333
H1_mix_00067840	chr4	-	3322	15	FSM	ENSG00000171566.12	ENST00000499023.7	3317	15	0	-5	0	5	multi-exon	TRUE	canonical	3	491	junction_4	57.9583330276755	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTCCTGAGAGATTCTGA	8	True	NA	-3	True	AATAAA	-21	NA	154550400	154534999	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_154536745_154537285_154537480_154537968_154538109_154539104_154539214_154539950_154540054_154540593_154540696_154540784_154540935_154542186_154542280_154544444_154544547_154545835_154545924_154546122_154546214_154547010_154547065_154547710_154547854_154548828_154548936_154550299
H1_mix_00067841	chr4	-	365	3	FSM	ENSG00000171566.12	ENST00000503251.5	365	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	272	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCTCTGGCTGGGAATA	NA	False	NA	13	True	ATTAAA	-40	NA	154539184	154536599	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_154536745_154537968_154538109_154539104
H1_mix_00067846	chr4	-	7296	14	FSM	ENSG00000164114.19	ENST00000311277.9	7328	14	45	-13	-35	13	multi-exon	FALSE	canonical	3	30	junction_10	14.8813850599255	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTTTCCAGAACTATAAG	35	False	NA	-24	True	AATAAA	-33	NA	155376920	155342644	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_155347906_155352595_155352729_155352911_155353058_155353178_155353341_155355070_155355161_155355715_155355885_155357448_155357520_155360167_155360416_155362047_155362142_155368585_155368813_155373135_155373457_155374936_155375022_155375775_155375915_155376770
H1_mix_00067853	chr4	-	896	3	Intergenic	novelGene_1117	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	10	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAAAGTTAAAAGTTTTAT	NA	False	NA	NA	False	AATAAA	-14	NA	156108989	156073174	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_-_156073661_156106678_156106848_156108748
H1_mix_00067854	chr4	-	4163	1	Intergenic	novelGene_1118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCATTCCCTTCTGCCAG	NA	False	NA	NA	False	NA	NA	NA	156108999	156104836	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_-_156104800_156109000
H1_mix_00067862	chr4	-	863	3	Intergenic	novelGene_1120	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_2	4	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGTTTCAAGCATTTACT	NA	False	NA	NA	False	ATTAAA	-20	NA	159600298	159585950	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_-_159586427_159592131_159592240_159600019
H1_mix_00067863	chr4	-	910	3	Intergenic	novelGene_1121	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_2	3	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGTTTCAAGCATTTACT	NA	False	NA	NA	False	ATTAAA	-20	NA	159600301	159585950	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_-_159586427_159592131_159592284_159600019
H1_mix_00067864	chr4	-	1876	8	FSM	ENSG00000145414.9	ENST00000274054.3	1876	8	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	37.2279245640546	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAATTCATGCCTTCTC	-11	True	NA	-26	True	ATTAAA	-22	NA	163166890	163128668	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_163129349_163133153_163133257_163137198_163137251_163140222_163140384_163145781_163145865_163148340_163148435_163164216_163164392_163166362
H1_mix_00067865	chr4	-	1163	4	FSM	ENSG00000145414.9	ENST00000502973.1	1159	4	0	-4	0	4	multi-exon	FALSE	canonical	3	25	junction_1	78.3212756677406	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTTGCTGTTCTTTGA	127	False	NA	-3	True	AATAAA	-13	NA	163166752	163156959	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_163157455_163158224_163158328_163164216_163164392_163166362
H1_mix_00067866	chr4	-	2762	3	FSM	ENSG00000164128.7	ENST00000296533.3	2762	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	4.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCTCTTTCAGTTTCAT	-1	True	NA	-2	True	ATTAAA	-27	NA	163332596	163323961	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_163325759_163325855_163326706_163332481
H1_mix_00067867	chr4	-	533	3	FSM	ENSG00000145416.14	ENST00000515471.5	584	3	51	0	2	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTAATCCCAGCACGGGAG	-14	True	NA	NA	False	NA	NA	NA	164383515	163988580	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_163988710_164111587_164111663_164383186
H1_mix_00067870	chr4	-	364	1	FSM	ENSG00000240674.1	ENST00000494303.1	480	1	128	-12	128	12	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAAATAAATAAAAGACC	NA	False	NA	NA	False	NA	NA	NA	165012717	165012353	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_165012400_165012700
H1_mix_00067871	chr4	-	9909	6	FSM	ENSG00000170088.14	ENST00000306480.11	9953	6	0	44	0	-44	multi-exon	TRUE	canonical	3	33	junction_2	5.03587132480567	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAATAACAACATATCA	3	True	NA	-49	True	TTTAAA	-21	NA	165112860	165070651	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_165079797_165085585_165085689_165088467_165088603_165100627_165100893_165102949_165103097_165112746
H1_mix_00067873	chr4	-	409	2	Intergenic	novelGene_1123	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCAAGTCACAGGGGATG	NA	False	NA	NA	False	NA	NA	NA	166722064	166716176	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_-_166716310_166721788
H1_mix_00067874	chr4	-	361	2	Intergenic	novelGene_1122	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	137	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCAAGTCACAGGGGATG	NA	False	NA	NA	False	NA	NA	NA	166722016	166716176	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_-_166716241_166721719
H1_mix_00067875	chr4	-	3124	11	FSM	ENSG00000196104.11	ENST00000357545.9	2884	11	-112	-128	-16	128	multi-exon	FALSE	canonical	3	16	junction_10	8.38093073590279	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAGCGCTCTTGGAAT	NA	False	NA	NA	False	NA	NA	NA	167234606	166733255	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_166735091_166737466_166737605_166741996_166742060_166754507_166754730_166792169_166792290_166889129_166889245_166912619_166912744_167000348_167000464_167062491_167062538_167233984_167234174_167234449
H1_mix_00067876	chr4	-	2903	11	FSM	ENSG00000196104.11	ENST00000504953.5	2900	11	0	-3	0	0	multi-exon	FALSE	canonical	3	19	junction_10	7.66093989011792	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAACTGTTCCTCAATGGT	NA	False	NA	-2	True	AATAAA	-17	NA	167234757	166733383	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_166735091_166737466_166737605_166741996_166742060_166754507_166754730_166792169_166792290_166889129_166889245_166912619_166912744_167000348_167000464_167062491_167062538_167233984_167234174_167234693
H1_mix_00067877	chr4	-	1402	8	FSM	ENSG00000196104.11	ENST00000512648.5	1456	8	0	54	0	-54	multi-exon	FALSE	canonical	3	16	junction_7	9.35687022503589	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGTGGAGTTTTAATGTT	9	True	NA	NA	False	AATAAA	-18	NA	167234552	166754139	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_166754730_166792169_166792290_166889129_166889245_166912619_166912744_167000348_167000464_167062491_167062538_167233984_167234174_167234449
H1_mix_00067878	chr4	-	6053	38	FSM	ENSG00000137628.18	ENST00000393743.8	6015	38	-40	2	15	-1	multi-exon	FALSE	canonical	0	0	junction_2	2.57026884929054	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCATTGGTCTCATTGTGT	3	True	NA	-3	True	AATAAA	-17	NA	168318792	168216295	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_168217033_168220654_168220718_168221729_168221882_168224242_168224386_168225528_168225677_168236251_168236374_168237285_168237428_168237690_168237796_168246417_168246619_168248187_168248293_168250953_168251107_168252508_168252657_168255710_168255870_168260864_168260990_168261999_168262129_168262682_168262788_168267581_168267692_168267840_168267984_168268853_168268970_168272042_168272139_168273278_168273399_168273933_168274084_168275344_168275504_168276014_168276182_168280334_168280591_168283445_168283607_168284819_168284936_168285392_168285499_168287047_168287204_168288173_168288316_168291747_168291907_168293786_168293946_168302299_168302417_168306378_168306721_168308005_168308196_168310997_168311068_168311255_168311366_168318621
H1_mix_00067882	chr4	-	3520	6	NNC	ENSG00000145439.12	novel	3440	5	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_2	70.0325638542528	19	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTCTGATGTTAATTT	9	True	NA	-8	True	AATAAA	-16	NA	169010254	168987592	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_168990329_168998201_168998286_169002070_169002206_169006754_169006892_169007635_169007757_169009947
H1_mix_00067884	chr4	-	5106	11	NNC	ENSG00000154447.15	novel	5120	12	NA	NA	-846	0	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_6	48.6601479652498	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGTCCCTTGTGTCAGT	NA	False	NA	-3	True	ATTAAA	-19	NA	169271802	169094258	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_169096688_169106846_169107206_169116268_169116631_169117522_169117783_169120818_169120990_169122099_169122267_169136317_169136621_169155479_169155576_169156403_169156680_169268819_169269308_169271607
H1_mix_00067886	chr4	-	5658	34	FSM	ENSG00000137601.18	ENST00000439128.6	5653	34	0	-5	0	5	multi-exon	FALSE	canonical	3	14	junction_18	9.16274646953705	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAATTGTCTTTTATTTA	-7	True	NA	1	True	ATTAAA	-23	NA	169612612	169393269	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_169394524_169400224_169400358_169400520_169400652_169401651_169401861_169406595_169406748_169424552_169424801_169426145_169426235_169433544_169433666_169438082_169438260_169463242_169463396_169477123_169477353_169477431_169477498_169479402_169479535_169507036_169507133_169507714_169507793_169508247_169508332_169537808_169537912_169555719_169555852_169555931_169556096_169561479_169561555_169561686_169561738_169561831_169561892_169562136_169562197_169576927_169577080_169580841_169580903_169585348_169585550_169587558_169587614_169588648_169588736_169589446_169589515_169590725_169590810_169599099_169599198_169602007_169602105_169602513_169602679_169612019
H1_mix_00067890	chr4	-	6341	3	FSM	ENSG00000198948.12	ENST00000361618.4	6301	3	-35	-5	0	0	multi-exon	FALSE	canonical	3	9	junction_2	8.5	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTTGTGTCCCACCTG	-7	True	NA	-30	True	AATAAA	-23	NA	170026430	169986596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_169992310_170005579_170006011_170026233
H1_mix_00067896	chr4	-	2108	14	FSM	ENSG00000109576.14	ENST00000353187.6	2101	14	0	-7	0	0	multi-exon	TRUE	canonical	3	46	junction_13	31.64185678167	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAAGGCATCAGACCCAT	-7	True	NA	-7	True	AATAAA	-19	NA	170090221	170060221	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_170060970_170061891_170061994_170064718_170064826_170066413_170066479_170067326_170067389_170068590_170068688_170069147_170069231_170070586_170070653_170073135_170073346_170078508_170078584_170087115_170087249_170088395_170088565_170089623_170089737_170090143
H1_mix_00067898	chr4	-	1165	5	NNC	ENSG00000109576.14	novel	2250	13	NA	NA	0	-2022	intron_retention	FALSE	canonical	3	39	junction_1	52.0210294015795	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATTGGATACTCATAATT	-7	True	NA	-3	True	AATAAA	-29	NA	170090221	170075271	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_170075462_170078508_170078584_170087115_170087249_170088395_170088565_170089623
H1_mix_00067899	chr4	-	747	6	NNC	ENSG00000109576.14	novel	2250	13	NA	NA	5	-2021	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_1	56.6413276680552	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTGGATACTCATAATTT	5	True	NA	-2	True	AATAAA	-30	NA	170090209	170075270	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_170075462_170078508_170078584_170087115_170087249_170088395_170088565_170089623_170089737_170090143
H1_mix_00067900	chr4	-	2454	4	FSM	ENSG00000245213.7	ENST00000499322.7	2585	4	0	131	0	-131	multi-exon	FALSE	canonical	1	3	junction_1	7.11805216802087	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCTGCATAATTTTCTG	348	False	NA	NA	False	NA	NA	NA	173169155	173143647	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_173145512_173166644_173166791_173167961_173168114_173168863
H1_mix_00067902	chr4	-	1441	5	FSM	ENSG00000164104.12	ENST00000296503.10	1441	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1069.70238267473	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATATATATACACATATAT	-4	True	NA	NA	False	NA	NA	NA	173334358	173331375	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_173332239_173332820_173332996_173333068_173333215_173333499_173333670_173334271
H1_mix_00067904	chr4	-	1460	5	FSM	ENSG00000164104.12	ENST00000446922.6	1175	5	0	-285	0	-40	multi-exon	FALSE	canonical	3	144	junction_4	1007.36745406033	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGTGTATATATATATAC	-1	True	NA	NA	False	NA	NA	NA	173334391	173331415	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_173332239_173332820_173332996_173333068_173333215_173333499_173333670_173334245
H1_mix_00067905	chr4	-	1841	3	FSM	ENSG00000164104.12	ENST00000511316.1	1841	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1227	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTTCTATTGTCTTTGT	710	False	NA	-21	True	AATAAA	-10	NA	173334432	173331704	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_173333215_173333499_173333670_173334271
H1_mix_00067907	chr4	-	997	3	FSM	ENSG00000272870.4	ENST00000609153.2	1026	3	29	0	29	0	multi-exon	TRUE	canonical	3	9	junction_2	5.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTGGGTTTCAATG	1173	False	NA	-16	True	AATAAA	-13	NA	173370692	173363779	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_173364199_173369433_173369611_173370291
H1_mix_00067908	chr4	-	1028	1	FSM	ENSG00000234801.3	ENST00000447135.2	971	1	85	-142	85	142	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGGGGTAATAGCTCCT	NA	False	NA	NA	False	TTTAAA	-10	NA	173616821	173615793	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_173615800_173616800
H1_mix_00067910	chr4	-	2730	7	FSM	ENSG00000164120.14	ENST00000296522.11	2619	7	-197	86	-44	-84	multi-exon	FALSE	canonical	2	6	junction_2	1.95078331845327	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTCTAAATAAATTCATAT	113	False	NA	NA	False	TTTAAA	-18	NA	174522685	174490260	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_174492095_174493150_174493315_174495547_174495625_174508695_174508793_174517970_174518078_174521943_174522068_174522358
H1_mix_00067912	chr4	-	2202	7	FSM	ENSG00000150630.4	ENST00000618562.2	2259	7	64	-7	64	7	multi-exon	FALSE	canonical	0	0	junction_6	2.62995563967658	212	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCAGTCCATTATCATCT	12	True	NA	NA	False	AATAAA	-26	NA	176792858	176683530	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_176684041_176687186_176687521_176687820_176687928_176711498_176711651_176727777_176727969_176729532_176729747_176792164
H1_mix_00067916	chr4	-	805	5	FSM	ENSG00000177822.9	ENST00000513752.5	805	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	9.54921462739214	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAACGCAGCCGGTCGTG	NA	False	NA	NA	False	NA	NA	NA	182144500	182141185	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_182141485_182143437_182143546_182143702_182143845_182144046_182144141_182144338
H1_mix_00067918	chr4	-	1836	5	FSM	ENSG00000129187.15	ENST00000500813.6	1829	5	0	-7	0	7	multi-exon	FALSE	canonical	3	6	junction_3	196.923843147548	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTCCTGTCCTTTCTGT	-5	True	NA	-12	True	NA	NA	NA	182917369	182890052	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_182891478_182893030_182893128_182894488_182894606_182915460_182915576_182917287
H1_mix_00067919	chr4	-	1944	6	FSM	ENSG00000129187.15	ENST00000357067.7	1931	6	0	-13	0	0	multi-exon	FALSE	canonical	3	342	junction_5	79.3332212884363	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACATTTTTATGTTATTA	-15	True	NA	-7	True	ATTAAA	-30	NA	182917379	182890090	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_182891478_182893030_182893128_182894488_182894606_182914922_182915059_182915460_182915576_182917287
H1_mix_00067920	chr4	-	1928	6	FSM	ENSG00000129187.15	ENST00000438320.7	1928	6	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_5	147.510541996157	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACATTTTTATGTTATTA	-22	True	NA	-7	True	ATTAAA	-30	NA	182917386	182890090	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_182891478_182893030_182893128_182894488_182894606_182914922_182915059_182915460_182915576_182917310
H1_mix_00067923	chr4	-	2591	7	FSM	ENSG00000182552.15	ENST00000327570.13	2590	7	0	-1	0	0	multi-exon	FALSE	canonical	0	0	junction_1	66.3994645226066	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTACACATTTTATTT	1	True	NA	0	True	AATAAA	-21	NA	183659178	183639634	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_183641469_183646487_183646538_183649450_183649569_183650983_183651132_183651217_183651328_183655880_183655962_183658928
H1_mix_00067924	chr4	-	2574	7	NIC	ENSG00000182552.15	novel	1620	8	NA	NA	5	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	71.9901613648235	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGCGATTTTTCTACACA	6	True	NA	-8	True	AATAAA	-13	NA	183659173	183639642	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_183641469_183646487_183646538_183649450_183649569_183650983_183651132_183651217_183651324_183655880_183655962_183658928
H1_mix_00067925	chr4	-	3880	8	NIC	ENSG00000168310.11	novel	2257	9	NA	NA	11	0	intron_retention	FALSE	canonical	3	45	junction_3	6.86309265683675	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAAGGGGCATCACTCC	0	True	NA	-17	True	AATAAA	-22	NA	184474537	184387728	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_184390750_184398914_184399080_184408157_184408276_184418166_184418214_184418531_184418709_184419468_184419569_184428977_184429071_184474378
H1_mix_00067929	chr4	-	2646	8	FSM	ENSG00000164305.19	ENST00000308394.9	2645	8	0	-1	0	1	multi-exon	FALSE	canonical	3	53	junction_7	336.723225531363	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGTCTTTGAGTTTTTTG	-2	True	NA	-1	True	AATATA	-20	NA	184649447	184627694	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_184629502_184631036_184631158_184631764_184631941_184632267_184632397_184635293_184635419_184638400_184638469_184648464_184648632_184649394
H1_mix_00067932	chr4	-	2889	13	FSM	ENSG00000151725.12	ENST00000281453.10	2494	13	0	-395	0	395	multi-exon	FALSE	canonical	3	1165	junction_8	107.525061678145	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGGACAGACAGCAGAGTT	-14	True	NA	NA	False	NA	NA	NA	184734096	184693689	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_184695402_184697646_184697804_184700819_184700882_184702088_184702137_184702362_184702442_184710071_184710181_184712943_184713014_184716396_184716634_184717135_184717197_184724956_184725063_184728917_184729036_184730919_184730969_184734015
H1_mix_00067933	chr4	-	1549	12	FSM	ENSG00000151725.12	ENST00000510146.5	1549	12	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	386.634386417363	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGATGTGAACATAATTTT	0	True	NA	-14	True	AATAAA	-14	NA	184734130	184695001	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_184695402_184697646_184697804_184702088_184702137_184702362_184702442_184710071_184710181_184712943_184713014_184716396_184716634_184717135_184717197_184724956_184725063_184728917_184729036_184730919_184730969_184734015
H1_mix_00067934	chr4	-	3862	21	NIC	ENSG00000151726.15	novel	3712	21	NA	NA	51	-2	combination_of_known_junctions	FALSE	canonical	3	22	junction_20	11.7536164647312	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTGAGTGAGGCATCTT	9387	False	NA	-11	True	AATAAA	-13	NA	184805737	184755602	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_184757266_184757634_184757707_184757818_184757921_184760356_184760501_184762406_184762524_184763166_184763256_184764852_184764926_184765890_184765987_184766621_184766757_184768315_184768451_184770398_184770477_184773080_184773155_184773662_184773715_184773842_184773876_184776483_184776663_184776883_184776984_184780331_184780434_184783926_184783992_184788616_184788732_184803319_184803547_184805526
H1_mix_00067938	chr4	-	4928	5	NIC	ENSG00000164323.15	novel	4851	5	NA	NA	36	0	combination_of_known_junctions	FALSE	canonical	3	96	junction_4	81.4167519617431	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTTTTGATCCTATGTT	8	True	NA	-3	True	AATAAA	-15	NA	185203964	185159664	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_185162926_185164028_185164180_185175785_185176052_185190142_185191213_185203784
H1_mix_00067940	chr4	-	2361	12	FSM	ENSG00000109775.11	ENST00000264689.11	2361	12	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_3	22.1825633257854	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGAACTTAAGTCTTTTT	1	True	NA	NA	False	CATAAA	-34	NA	185425964	185399536	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_185400479_185403493_185403619_185405779_185405857_185407935_185408061_185408270_185408436_185413725_185413873_185415154_185415348_185415709_185415868_185418440_185418508_185418586_185418771_185422484_185422564_185425865
H1_mix_00067941	chr4	-	667	5	FSM	ENSG00000168491.10	ENST00000507501.5	705	5	38	0	38	0	multi-exon	FALSE	canonical	1	3	junction_3	1.78535710713571	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATCCAAAATTACTGTG	685	False	NA	NA	False	NA	NA	NA	185471065	185459925	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_185460239_185461048_185461160_185462642_185462709_185462993_185463050_185470944
H1_mix_00067943	chr4	-	2086	7	FSM	ENSG00000154553.16	ENST00000284771.7	2658	7	0	572	0	465	multi-exon	FALSE	canonical	3	29	junction_1	10.3708994574027	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCACCTCCAAAACTCTCA	-1	True	NA	NA	False	NA	NA	NA	185535507	185501231	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_185502484_185504474_185504587_185506521_185506653_185514702_185514891_185523361_185523447_185525019_185525172_185535341
H1_mix_00067944	chr4	-	6253	5	FSM	ENSG00000154553.16	ENST00000504011.5	2819	5	-93	-3341	-77	-452	multi-exon	FALSE	canonical	3	6	junction_1	21.8460522749535	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCACCGTCTTCCCTTT	53	False	NA	-46	True	ATTAAA	-18	NA	185535584	185508752	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_185514338_185514702_185514891_185523361_185523447_185525019_185525172_185535341
H1_mix_00067945	chr4	-	4509	21	NIC	ENSG00000154556.18	novel	4622	24	NA	NA	20	-12	combination_of_known_junctions	FALSE	canonical	3	43	junction_2	29.3540457177541	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAAAATGCATTTTGTTG	-7	True	NA	47	True	TATAAA	-33	NA	185775502	185585455	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_185587689_185589678_185589786_185593885_185593936_185611779_185611981_185614830_185614960_185615044_185615160_185618584_185618632_185620062_185620152_185626831_185627020_185630548_185630599_185646667_185646783_185649466_185649657_185651783_185651829_185652661_185652729_185657423_185657597_185662103_185662243_185678422_185678548_185678795_185678823_185684753_185684847_185690561_185690612_185775226
H1_mix_00067950	chr4	-	1790	12	FSM	ENSG00000154556.18	ENST00000470685.5	1790	12	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_11	33.2834061352942	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCCAATAAACCTGAATTT	887	False	NA	-31	True	ATTAAA	-33	NA	185812238	185646616	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_185646783_185649466_185649657_185651783_185651829_185652661_185652729_185657423_185657597_185662103_185662243_185678422_185678548_185678795_185678823_185684753_185684847_185690561_185690612_185775226_185775367_185811663
H1_mix_00067951	chr4	-	575	6	FSM	ENSG00000154556.18	ENST00000445115.5	575	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	54.1974169126168	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCGCATTACCCAGGGAT	30	True	NA	NA	False	NA	NA	NA	185775413	185657486	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_185657597_185662103_185662243_185678422_185678479_185678795_185678823_185734098_185734155_185775226
H1_mix_00067957	chr4	-	540	3	Antisense	novelGene_ENSG00000164344.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	93	junction_2	71	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTAGTGGTCTCTTC	NA	False	NA	-1	True	ATTAAA	-22	NA	186247322	186241993	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_-_186242333_186245315_186245479_186247284
H1_mix_00067958	chr4	-	610	2	Antisense	novelGene_ENSG00000164344.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	526	junction_1	0	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTAGTGGTCTCTTC	NA	False	NA	-1	True	ATTAAA	-22	NA	186247344	186241993	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_-_186242330_186247070
H1_mix_00067960	chr4	-	2561	2	Antisense	novelGene_ENSG00000164344.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	146	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTAGTGGTCTCTTC	NA	False	NA	-1	True	ATTAAA	-22	NA	186247540	186241993	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_-_186242330_186245315
H1_mix_00067961	chr4	-	972	3	Antisense	novelGene_ENSG00000164344.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	78	junction_2	78.5	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTAGTGGTCTCTTC	NA	False	NA	-1	True	ATTAAA	-22	NA	186247540	186241993	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_-_186242333_186245315_186245479_186247070
H1_mix_00067964	chr4	-	2022	8	NIC	ENSG00000179046.9	novel	1998	8	NA	NA	0	27	combination_of_known_junctions	FALSE	canonical	3	31	junction_7	30.8888725754048	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCATTTGTGTAACTGT	3	True	NA	3	True	AATAAA	-41	NA	188109603	188091244	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_188091942_188097060_188097162_188097323_188097347_188099034_188099176_188101055_188101251_188104836_188104933_188105179_188105588_188109242
H1_mix_00067965	chr4	-	1998	8	FSM	ENSG00000179046.9	ENST00000682553.1	1998	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_7	31.1985085985774	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAGCCTGATTTAATAT	3	True	NA	-24	True	AATAAA	-14	NA	188109603	188091271	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_188091942_188097060_188097162_188097323_188097347_188099034_188099176_188101055_188101251_188104836_188104933_188105179_188105591_188109242
H1_mix_00067969	chr4	+	5227	1	Intergenic	novelGene_1008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCCCTCTGAAGAAGAGG	NA	False	NA	NA	False	NA	NA	NA	9597378	9602605	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_9597400_9602600
H1_mix_00067970	chr4	+	241	1	Intergenic	novelGene_1014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTTTTCCCCCAGTTCAA	2113	False	NA	NA	False	NA	NA	NA	17000248	17000489	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_17000200_17000500
H1_mix_00067971	chr4	+	351	1	Intergenic	novelGene_1015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCAGCAGCTGCCGCTGCT	2822	False	NA	NA	False	NA	NA	NA	17000957	17001308	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_17001000_17001300
H1_mix_00067973	chr4	+	4558	1	Intergenic	novelGene_1019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGCCTATTTGGTGGTC	2161	False	NA	NA	False	AATAAA	-17	NA	24323611	24328169	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_24323600_24328200
H1_mix_00067974	chr4	+	1984	1	Intergenic	novelGene_1028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTCAATGAATGAATTTCA	NA	False	NA	NA	False	ACTAAA	-15	NA	44398830	44400814	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_44398800_44400800
H1_mix_00067975	chr4	+	2173	1	Intergenic	novelGene_1030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGTACCACAAATACCCA	NA	False	NA	NA	False	AAGAAA	-42	NA	52739046	52741219	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_52739000_52741200
H1_mix_00067976	chr4	+	5135	1	Intergenic	novelGene_1032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAAGTGAGAGTTGACTC	4200	False	NA	NA	False	NA	NA	NA	61737028	61742163	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_61737000_61742200
H1_mix_00067977	chr4	+	3377	1	Intergenic	novelGene_1034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGCAACCCACTCAGATC	NA	False	NA	NA	False	NA	NA	NA	67431323	67434700	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_67431300_67434700
H1_mix_00067980	chr4	+	299	1	Intergenic	novelGene_1042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGATAAGGCGCAGATCCT	NA	False	NA	NA	False	AAAACA	-6	NA	78716139	78716438	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_78716100_78716400
H1_mix_00067981	chr4	+	561	1	Intergenic	novelGene_1043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATGATAATGAAGGAAGCA	NA	False	NA	NA	False	NA	NA	NA	78717771	78718332	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_78717800_78718300
H1_mix_00067982	chr4	+	2643	1	Intergenic	novelGene_1045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGCCCATAGTGAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	79555807	79558450	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_79555800_79558400
H1_mix_00067983	chr4	+	290	1	Intergenic	novelGene_1047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCTCCTTTCTTTTAGC	NA	False	NA	NA	False	NA	NA	NA	81379563	81379853	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_81379600_81379900
H1_mix_00067984	chr4	+	1683	1	Intergenic	novelGene_1072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACACCTTGTCCTCACAAG	3978	False	NA	NA	False	NA	NA	NA	87935864	87937547	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_87935900_87937500
H1_mix_00067989	chr4	+	962	1	Intergenic	novelGene_1086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATACAAGTCCTTTCTAC	NA	False	NA	NA	False	NA	NA	NA	93137966	93138928	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_93138000_93138900
H1_mix_00067990	chr4	+	354	1	Intergenic	novelGene_1090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAAGGGGACTGACTTAC	NA	False	NA	NA	False	NA	NA	NA	94087443	94087797	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_94087400_94087800
H1_mix_00067991	chr4	+	272	1	Intergenic	novelGene_1091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACTGTGAGAGTTACCCG	6341	False	NA	NA	False	NA	NA	NA	94296141	94296413	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_94296100_94296400
H1_mix_00067992	chr4	+	2497	1	Intergenic	novelGene_1094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	286	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTCTTAAAGACTATCTT	2638	False	NA	NA	False	NA	NA	NA	105250378	105252875	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_105250400_105252900
H1_mix_00067994	chr4	+	754	1	Intergenic	novelGene_1096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTTGAAAAAAAAATTCCCT	NA	False	NA	NA	False	NA	NA	NA	118554277	118555031	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_118554300_118555000
H1_mix_00067995	chr4	+	201	1	Intergenic	novelGene_1097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATTTTTATTTTGTATG	NA	False	NA	NA	False	TATAAA	-18	NA	118555796	118555997	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_118555800_118556000
H1_mix_00067996	chr4	+	371	1	Intergenic	novelGene_1100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAAGAAAGAGGCCCAGAG	NA	False	NA	NA	False	NA	NA	NA	122075994	122076365	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_122076000_122076400
H1_mix_00067999	chr4	+	680	1	Intergenic	novelGene_1107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTATATCTTGGAGTATT	NA	False	NA	NA	False	NA	NA	NA	132077452	132078132	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_132077500_132078100
H1_mix_00068000	chr4	+	267	1	Intergenic	novelGene_1110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTACTCCCTCCTTGGTG	NA	False	NA	NA	False	NA	NA	NA	138930502	138930769	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_138930500_138930800
H1_mix_00068001	chr4	+	299	1	Intergenic	novelGene_1111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGCCGGGCGCGGTGGCT	870	False	NA	NA	False	NA	NA	NA	139178977	139179276	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_139179000_139179300
H1_mix_00068002	chr4	+	238	1	Intergenic	novelGene_1113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTCCCAATCCAAAGCCT	NA	False	NA	NA	False	NA	NA	NA	140216089	140216327	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_140216100_140216300
H1_mix_00068004	chr4	+	274	1	Intergenic	novelGene_1114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCCAAACAACTTGACCT	NA	False	NA	NA	False	NA	NA	NA	145836066	145836340	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_145836100_145836300
H1_mix_00068007	chr4	+	2349	1	Intergenic	novelGene_1115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCTGAGTGTGATGATGC	NA	False	NA	NA	False	NA	NA	NA	145862095	145864444	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_145862100_145864400
H1_mix_00068015	chr4	+	768	1	Intergenic	novelGene_1125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGGTGTTCAGGTTTGCT	7815	False	NA	NA	False	NA	NA	NA	174291829	174292597	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_174291800_174292600
H1_mix_00068017	chr4	+	3702	1	Intergenic	novelGene_1127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATATTGATGAAGTCTAG	NA	False	NA	NA	False	CATAAA	-6	NA	179188794	179192496	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_179188800_179192500
H1_mix_00068018	chr4	+	245	1	Intergenic	novelGene_1128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTACCCAAAACTCCGGC	5345	False	NA	NA	False	NA	NA	NA	182814797	182815042	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_182814800_182815000
H1_mix_00068021	chr4	+	2772	4	FSM	ENSG00000250312.8	ENST00000609714.1	2772	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	19.9053315024448	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCTTTGACATTAGAGAA	27	False	NA	NA	False	AAGAAA	-22	NA	124537	162701	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_125297_130787_130915_131409_131506_160911
H1_mix_00068022	chr4	+	8737	3	NNC	ENSG00000198155.5	novel	2598	2	NA	NA	-16	6163	at_least_one_novel_splicesite	TRUE	canonical	3	28	junction_2	20	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACCAGGAGTTCCATTAA	1	True	NA	NA	False	NA	NA	NA	212593	262148	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_212782_253559_256833_256872
H1_mix_00068023	chr4	+	741	4	FSM	ENSG00000131127.14	ENST00000503699.1	720	4	-21	0	-2	0	multi-exon	FALSE	canonical	3	6	junction_3	36.1201698039567	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGCATTTTATTTTTCT	4	True	NA	NA	False	NA	NA	NA	337811	358550	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_337987_343781_343909_344334_344431_358207
H1_mix_00068024	chr4	+	538	2	FSM	ENSG00000131127.14	ENST00000366506.4	536	2	-2	0	-2	0	multi-exon	FALSE	canonical	3	9	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCCTACACTTGTGAAGAA	4	True	NA	NA	False	NA	NA	NA	337811	373026	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_337987_372663
H1_mix_00068025	chr4	+	1906	1	ISM	ENSG00000131127.14	ENST00000240499.8	12601	4	44255	894	4030	3	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGTTTTTCATTCCT	NA	False	NA	28	True	AATAAA	-19	NA	382068	383974	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_382100_384000
H1_mix_00068027	chr4	+	3203	13	FSM	ENSG00000174227.16	ENST00000310340.9	3203	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	38.3709959908957	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGTATCATATTTTCC	-22	True	NA	7	True	AATAAA	-17	NA	499220	539529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_499490_500395_500602_505717_505928_507404_507594_508828_508971_515972_516186_521055_521250_521659_521942_523458_523914_527038_527231_530435_530746_533817_533982_539152
H1_mix_00068028	chr4	+	2804	8	NIC	ENSG00000174227.16	novel	3203	13	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	11	junction_7	45.3885717882772	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTCATCTTTACTTTTGA	10	True	NA	18	True	AATAAA	-14	NA	499252	522836	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_499726_500395_500602_505717_505928_507404_507594_508828_508971_515972_516186_521055_521250_521659
H1_mix_00068029	chr4	+	1936	8	NIC	ENSG00000174227.16	novel	3909	13	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	49.9991836668054	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACAGTTTGTATCATATT	44	True	NA	3	True	AATAAA	-13	NA	499286	539525	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_499726_500395_500602_505717_505928_507404_507594_508828_508971_515972_516186_533817_533982_539152
H1_mix_00068031	chr4	+	567	6	FSM	ENSG00000185619.18	ENST00000419774.5	589	6	22	0	5	0	multi-exon	FALSE	canonical	3	8	junction_3	35.4197684916206	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGTGAAGTACCTGGAGG	-17	True	NA	NA	False	NA	NA	NA	705769	734943	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_705971_730629_730669_730969_731111_732443_732499_733671_733790_734930
H1_mix_00068033	chr4	+	1801	11	FSM	ENSG00000127419.17	ENST00000264771.9	1787	11	-14	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	9.64157663455516	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTCTCCACTTTTTGCGG	-17	True	NA	12	True	NA	NA	NA	932445	958656	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_932541_947708_947893_948115_948155_950420_950519_951206_951259_951681_951718_952366_952451_953189_953355_955404_955484_955754_955891_957823
H1_mix_00068034	chr4	+	2259	11	FSM	ENSG00000127419.17	ENST00000438836.6	2236	11	-23	0	3	0	multi-exon	FALSE	canonical	2	8	junction_3	15.3609895514579	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTCTCCACTTTTTGCGG	-14	True	NA	12	True	NA	NA	NA	932448	958656	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_932541_947708_947893_948115_948616_950420_950519_951206_951259_951681_951718_952366_952451_953189_953355_955404_955484_955754_955891_957823
H1_mix_00068036	chr4	+	2590	13	NNC	ENSG00000127415.13	novel	697	6	NA	NA	-877	-89	intron_retention	FALSE	canonical	1	1	junction_1	13.378050015687	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACCTCCACCGGCAGTCA	3894	False	NA	-76	True	NA	NA	NA	990947	1004416	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_991500_991716_991941_1000611_1000698_1000881_1000990_1001467_1001564_1001650_1002162_1002268_1002486_1002731_1002945_1003035_1003158_1003344_1003471_1003548_1003626_1004011_1004113_1004259
H1_mix_00068038	chr4	+	3431	6	ISM	ENSG00000127418.15	ENST00000504138.5	1663	7	22	-1550	12	0	intron_retention	FALSE	canonical	1	8	junction_1	37.8227444800083	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGGTGTTTCTGCCCAT	27	False	NA	25	True	NA	NA	NA	1012167	1026897	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_1012278_1012469_1012565_1022202_1022476_1023640_1023722_1023816_1024102_1024310
H1_mix_00068039	chr4	+	499	1	FSM	ENSG00000273179.1	ENST00000609548.1	397	1	-170	68	-170	-68	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTATCGTTCTCGTTT	NA	False	NA	NA	False	NA	NA	NA	1167607	1168106	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1167600_1168100
H1_mix_00068040	chr4	+	7575	1	FSM	ENSG00000196810.5	ENST00000581398.1	5652	1	-1343	-580	-384	580	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTCTTGCATATGT	-11	True	NA	NA	False	ATTAAA	-19	NA	1248915	1256490	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1248900_1256500
H1_mix_00068041	chr4	+	739	2	FSM	ENSG00000196810.5	ENST00000507044.1	739	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGCCCTGCAGAGATCTA	32	False	NA	NA	False	NA	NA	NA	1249299	1250446	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1249703_1250110
H1_mix_00068042	chr4	+	940	2	FSM	ENSG00000196810.5	ENST00000514984.1	533	2	-407	0	-57	0	multi-exon	FALSE	canonical	3	7	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCTCCAACTGGGGTCC	246	False	NA	NA	False	NA	NA	NA	1249702	1251187	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1250351_1250895
H1_mix_00068048	chr4	+	5371	3	FSM	ENSG00000090316.16	ENST00000506530.5	5371	3	0	0	0	0	multi-exon	FALSE	canonical	3	692	junction_1	3.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCGTGTGAGCCGAGGC	NA	False	NA	36	True	AATAAA	-44	NA	1329343	1340136	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1332866_1336860_1336995_1338421
H1_mix_00068049	chr4	+	2069	4	FSM	ENSG00000090316.16	ENST00000503162.1	2069	4	0	0	0	0	multi-exon	FALSE	canonical	3	692	junction_1	14.6590889515307	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAATGGTTTTCTATTT	2241	False	NA	13	True	AATAAA	-21	NA	1332166	1340113	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1332866_1336860_1336995_1338421_1338618_1339073
H1_mix_00068050	chr4	+	3130	3	FSM	ENSG00000090316.16	ENST00000515766.1	3136	3	0	6	0	4	multi-exon	FALSE	canonical	3	692	junction_1	17	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGAGCCGAGGCTGCCG	2635	False	NA	41	True	AATAAA	-23	NA	1332560	1340141	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1332866_1336860_1338618_1339073
H1_mix_00068051	chr4	+	2715	10	FSM	ENSG00000013810.21	ENST00000484651.5	2715	10	0	0	0	0	multi-exon	FALSE	canonical	3	591	junction_4	63.2346209283381	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGGTGTCATCTCCGCA	16	True	NA	NA	False	NA	NA	NA	1721518	1738350	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1721644_1723420_1723584_1723727_1723871_1727707_1728788_1730886_1730963_1731171_1731302_1735272_1735326_1735730_1735835_1737240_1737329_1737597
H1_mix_00068055	chr4	+	4294	18	FSM	ENSG00000068078.20	ENST00000412135.7	4294	18	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_4	57.3167004654763	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGCTTTCTGTCTCCA	-1	True	NA	17	True	AATAAA	-22	NA	1793292	1808872	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1793466_1793832_1794044_1799253_1799524_1799746_1799801_1801366_1801537_1801619_1801744_1801834_1802026_1803691_1803837_1804329_1804521_1804823_1804970_1805354_1805477_1805558_1805670_1805749_1805941_1806050_1806174_1806256_1806328_1806545_1806684_1806828_1806935_1807115
H1_mix_00068056	chr4	+	4322	19	NNC	ENSG00000068078.20	novel	2841	19	NA	NA	114	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_8	80.478296284399	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCCCTGTGCTTTCTGT	132	False	NA	12	True	AATAAA	-17	NA	1793425	1808867	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_1793466_1793832_1794044_1799253_1799524_1799746_1799813_1801366_1801537_1801619_1801744_1801834_1802026_1802913_1803065_1803691_1803837_1804329_1804521_1804823_1804970_1805354_1805477_1805558_1805670_1805749_1805941_1806050_1806174_1806256_1806328_1806545_1806684_1806828_1806935_1807112
H1_mix_00068057	chr4	+	3314	13	NIC	ENSG00000068078.20	novel	4301	18	NA	NA	91	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_4	64.1821950907467	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCCCTGTGCTTTCTGT	7934	False	NA	12	True	AATAAA	-17	NA	1801719	1808867	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_1801744_1801834_1802026_1803691_1803837_1804329_1804521_1804820_1804970_1805354_1805477_1805558_1805670_1805749_1805941_1806050_1806174_1806256_1806328_1806545_1806684_1806828_1806935_1807115
H1_mix_00068058	chr4	+	7493	20	NIC	ENSG00000109685.19	novel	7560	22	NA	NA	-159	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	90.5220011211673	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAACATTTTAAAGGCT	668	False	NA	-6	True	TTTAAA	-44	NA	1871233	1982173	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_1871543_1900625_1901252_1904215_1904379_1916870_1917038_1918140_1918624_1930625_1930771_1935143_1935263_1951071_1951204_1952107_1952232_1953323_1953525_1955160_1955341_1955692_1955850_1955982_1956189_1957932_1958037_1959470_1959741_1961034_1961152_1974862_1975005_1975293_1975401_1976474_1976680_1978637
H1_mix_00068059	chr4	+	3267	10	NIC	ENSG00000109685.19	novel	7560	22	NA	NA	1	-189	combination_of_known_junctions	FALSE	canonical	3	40	junction_9	87.0816276636077	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGATTTGTGTGTGTGGCG	-6	True	NA	7	True	AATAAA	-19	NA	1871393	1943546	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_1871543_1900625_1901252_1904215_1904379_1916870_1917038_1918140_1918624_1930625_1930771_1935143_1935263_1938450_1938533_1939653_1939779_1942338
H1_mix_00068060	chr4	+	8465	10	FSM	ENSG00000109685.19	ENST00000398261.6	8465	10	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	109.728733983986	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCTGTTCCTTCCTCTGA	NA	False	NA	-9	True	AATAAA	-2	NA	1892169	1948799	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1892264_1900625_1901252_1904215_1904379_1916870_1917038_1918140_1918624_1930625_1930771_1935143_1935263_1938450_1938533_1939653_1939779_1942338
H1_mix_00068065	chr4	+	5020	12	NIC	ENSG00000087266.17	novel	2351	13	NA	NA	32	2757	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	37.0266823603138	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTCTTTTTTTTTTGGG	28	True	NA	20	True	AATAAA	-20	NA	2818216	2837046	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_2818391_2820613_2820754_2822934_2823038_2824612_2824731_2825125_2825197_2827229_2827319_2827605_2827675_2829492_2830148_2831570_2831680_2832330_2832413_2832989_2833050_2833696
H1_mix_00068071	chr4	+	2562	5	FSM	ENSG00000249673.8	ENST00000658490.1	2541	5	-21	0	4	0	multi-exon	FALSE	canonical	3	10	junction_1	5.06828373317832	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCACAGCCACACCAGCAG	-34	True	NA	-5	True	AATAAA	-8	NA	2934885	2940497	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_2936891_2937751_2937845_2937974_2938143_2938692_2938793_2940301
H1_mix_00068077	chr4	+	4672	17	ISM	ENSG00000159788.20	ENST00000344733.9	5469	18	1923	-6	2	-2	3prime_fragment	FALSE	canonical	3	18	junction_16	12.2365998136737	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCGTCGGCCTGGTGCTGG	1810	False	NA	7	True	AATAAA	-17	NA	3316069	3439911	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_3318052_3342936_3343054_3386415_3386438_3414071_3414242_3414751_3414845_3415977_3416122_3416912_3417093_3417387_3417542_3420641_3420719_3422375_3422571_3422904_3422979_3423514_3423642_3425463_3425561_3428089_3428170_3428557_3428712_3430406_3430956_3439454
H1_mix_00068080	chr4	+	883	3	Antisense	novelGene_ENSG00000253917.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_2	55.5	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACACAAAGCCTGTTTGGT	NA	False	NA	5	True	AATAAA	-13	NA	3927763	3933035	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_+_3927996_3929642_3929921_3932662
H1_mix_00068081	chr4	+	3705	1	Intergenic	novelGene_1003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	3901	False	NA	NA	False	NA	NA	NA	4035799	4039504	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_4035800_4039500
H1_mix_00068082	chr4	+	1609	2	FSM	ENSG00000168826.16	ENST00000504302.1	523	2	0	-1086	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGTTTCCTCTAGCAT	NA	False	NA	NA	False	AATAAA	-18	NA	4302626	4321783	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_4303092_4320639
H1_mix_00068083	chr4	+	3407	3	FSM	ENSG00000247708.8	ENST00000663324.1	3167	3	-30	-210	-18	203	multi-exon	FALSE	canonical	3	7	junction_2	10	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGATCCCCCCTTTGGGA	NA	False	NA	NA	False	NA	NA	NA	4542112	4563117	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_4542626_4544737_4544908_4560393
H1_mix_00068086	chr4	+	1092	1	FSM	ENSG00000280310.1	ENST00000624794.1	1048	1	1	-45	1	45	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATGAGAATGGACTGATA	NA	False	NA	35	True	CATAAA	-30	NA	4820405	4821497	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_4820400_4821500
H1_mix_00068087	chr4	+	3680	13	FSM	ENSG00000152953.13	ENST00000512018.5	1989	13	-149	-1542	-33	2	multi-exon	FALSE	canonical	0	0	junction_2	5.42307313450798	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTCTCACCACTTTGTT	0	True	NA	15	True	AATAAA	-15	NA	5051446	5500991	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_5051916_5139904_5139961_5140196_5140307_5168298_5168451_5331219_5331394_5398206_5398245_5416844_5416935_5446672_5446777_5456806_5456924_5460102_5460229_5466702_5466835_5468005_5468071_5498944
H1_mix_00068088	chr4	+	523	2	FSM	ENSG00000072840.13	ENST00000514919.1	523	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGGTGACTCACATCCCCA	6	True	NA	NA	False	NA	NA	NA	5752674	5753929	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_5753053_5753784
H1_mix_00068089	chr4	+	586	4	FSM	ENSG00000072840.13	ENST00000515113.1	586	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	5.65685424949238	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCTGCTTCCTGACCAA	NA	False	NA	NA	False	TTTAAA	-15	NA	5793607	5801807	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_5793718_5797021_5797233_5798585_5798793_5801749
H1_mix_00068090	chr4	+	4604	4	FSM	ENSG00000249896.2	ENST00000636374.1	2635	4	-150	-1819	-150	1819	multi-exon	FALSE	canonical	3	14	junction_2	1.4142135623731	215	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTACTTTATTTTTATTT	NA	False	NA	4	True	ACTAAA	-16	NA	6222068	6236646	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_6222685_6226925_6227004_6228016_6228140_6232859
H1_mix_00068091	chr4	+	814	3	FSM	ENSG00000109501.15	ENST00000506588.6	1439	3	0	625	0	-625	multi-exon	FALSE	canonical	3	143	junction_1	34	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCACTCTTGTCTCCCTG	0	True	NA	NA	False	NA	NA	NA	6269849	6287504	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_6270015_6277450_6277688_6287092
H1_mix_00068092	chr4	+	3662	8	FSM	ENSG00000109501.15	ENST00000682275.1	3662	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	74.5949607095902	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGAACCTGCAGCGCTT	0	True	NA	17	True	AATAAA	-7	NA	6269849	6303251	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_6270015_6277450_6277688_6287092_6287176_6288986_6289132_6291196_6291368_6291916_6291998_6295004_6295190_6300656
H1_mix_00068096	chr4	+	7854	10	FSM	ENSG00000170871.12	ENST00000307659.6	7854	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	11.7094453801669	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTCAACATAAGTTCCAT	-2	True	NA	13	True	AATAAA	-16	NA	6782726	6884164	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_6782842_6804522_6804607_6824184_6824685_6842066_6842205_6857163_6857231_6858424_6858507_6860900_6864184_6871573_6871683_6876659_6876758_6880786
H1_mix_00068098	chr4	+	896	1	FSM	ENSG00000228919.5	ENST00000623059.1	1295	1	-15	414	-15	-414	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGCCCGCCGCCCGCCGTC	NA	False	NA	NA	False	GGGGCT	-36	NA	7938985	7939881	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_7939000_7939900
H1_mix_00068099	chr4	+	2670	12	NIC	ENSG00000155275.19	novel	1666	9	NA	NA	21	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	35.2532748610643	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGCCACTCTAAGTGGC	21	False	NA	18	True	AATAAA	-20	NA	8436160	8476555	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_8436400_8438791_8439043_8446475_8446591_8449697_8449889_8451959_8452029_8452881_8452990_8454741_8454814_8463984_8464092_8465377_8465562_8467913_8468347_8471083_8471201_8475771
H1_mix_00068100	chr4	+	2484	11	FSM	ENSG00000109625.19	ENST00000515606.1	2464	11	-12	-8	6	0	multi-exon	FALSE	canonical	2	4	junction_2	53.4419311028335	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGAGGATCTGTGTAAG	62	False	NA	38	True	ATTAAA	-25	NA	8592713	8619759	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_8592922_8599452_8599583_8600956_8601498_8603975_8604189_8605988_8606186_8606736_8606899_8607266_8607426_8612026_8612163_8614358_8614499_8618428_8618529_8619261
H1_mix_00068101	chr4	+	2242	11	NIC	ENSG00000109625.19	novel	2538	11	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	52.9051982323098	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGCACTGGAATGAGAGG	1	True	NA	27	True	ATTAAA	-14	NA	8592778	8619748	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_8592922_8599452_8599583_8601122_8601498_8603975_8604189_8605988_8606186_8606736_8606899_8607266_8607426_8612026_8612163_8614358_8614499_8618428_8618529_8619261
H1_mix_00068102	chr4	+	218	1	FSM	ENSG00000284636.1	ENST00000641589.1	218	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGACGCGGGCGCAGG	NA	False	NA	NA	False	NA	NA	NA	9000840	9001058	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_9000800_9001100
H1_mix_00068103	chr4	+	219	1	FSM	ENSG00000284648.1	ENST00000641197.1	219	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGACGCGGGCGTGGG	56	False	NA	NA	False	NA	NA	NA	9532428	9532647	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_9532400_9532600
H1_mix_00068105	chr4	+	1042	1	FSM	ENSG00000250896.1	ENST00000507437.1	918	1	-124	0	-124	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3201	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGCCACTGAAGCTCTCG	3241	False	NA	NA	False	NA	NA	NA	11371850	11372892	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_11371800_11372900
H1_mix_00068106	chr4	+	240	1	Intergenic	novelGene_1009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAACAAAAGGGGCAACA	724	False	NA	NA	False	AATAAA	-36	NA	11373511	11373751	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_11373500_11373800
H1_mix_00068107	chr4	+	729	3	ISM	ENSG00000249631.7	ENST00000668579.1	1270	6	99803	-59	51842	59	3prime_fragment	FALSE	canonical	2	7	junction_2	1	196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTTACAATCC	NA	False	NA	NA	False	NA	NA	NA	11822261	11823965	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_11822475_11823038_11823209_11823619
H1_mix_00068110	chr4	+	667	3	FSM	ENSG00000237765.8	ENST00000510920.5	662	3	-5	0	-5	0	multi-exon	FALSE	canonical	3	42	junction_1	29	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTTATTGATAAGCCTC	-19	True	NA	NA	False	ATTAAA	-25	NA	15681656	15687312	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_15681785_15686235_15686463_15687000
H1_mix_00068111	chr4	+	780	4	FSM	ENSG00000002549.13	ENST00000512397.1	689	4	-148	57	0	-57	multi-exon	FALSE	canonical	3	457	junction_3	15.542057635833	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTTCGCTCTTGTCAT	88	False	NA	NA	False	AATATA	-29	NA	17577303	17582632	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_17577568_17579823_17579940_17581759_17581815_17582287
H1_mix_00068113	chr4	+	537	3	FSM	ENSG00000109805.10	ENST00000509719.1	537	3	0	0	0	0	multi-exon	TRUE	canonical	3	304	junction_1	5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAATTTGCCCTTCTAATT	6246	False	NA	NA	False	NA	NA	NA	17817231	17823147	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_17817454_17817938_17818089_17822982
H1_mix_00068116	chr4	+	1256	9	FSM	ENSG00000163138.19	ENST00000506702.5	1233	9	-23	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	8.87323926196065	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTGACTTCTTGGAATC	18	False	NA	23	True	AATAAA	-19	NA	20700435	20752900	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_20700618_20704465_20704534_20704659_20704815_20707802_20707871_20709682_20709774_20712787_20712923_20713431_20713540_20727284_20727398_20752564
H1_mix_00068117	chr4	+	320	3	FSM	ENSG00000163138.19	ENST00000506552.1	414	3	89	5	89	5	multi-exon	FALSE	canonical	3	8	junction_2	7	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTGTAAGTAGAATATTAT	NA	False	NA	NA	False	NA	NA	NA	20712787	20724884	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_20712923_20713431_20713540_20724807
H1_mix_00068118	chr4	+	330	1	FSM	ENSG00000244538.1	ENST00000480875.1	255	1	-10	-65	-10	65	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTGAAAGCTCTGGAAAC	26	False	NA	NA	False	AATAAA	-24	NA	22594185	22594515	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_22594200_22594500
H1_mix_00068119	chr4	+	595	6	FSM	ENSG00000053900.11	ENST00000505991.1	595	6	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_5	27.8754372163021	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATTAAGCTCTTGGGA	11	True	NA	NA	False	AAGAAA	-10	NA	25377319	25388854	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_25377557_25380373_25380480_25383260_25383394_25388499_25388575_25388716_25388744_25388837
H1_mix_00068120	chr4	+	590	8	FSM	ENSG00000053900.11	ENST00000503805.5	590	8	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_2	37.8563342231697	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAATAGCAGCCACCTTAA	NA	False	NA	NA	False	NA	NA	NA	25394757	25409769	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_25394906_25396663_25396765_25396847_25396900_25402970_25403027_25405572_25405620_25406828_25406886_25407196_25407254_25409697
H1_mix_00068122	chr4	+	3807	8	FSM	ENSG00000053900.11	ENST00000504256.5	3807	8	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_6	35.5280860441311	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGCTTCATCTTCTCT	NA	False	NA	14	True	AATAAA	-21	NA	25405600	25418498	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_25405620_25406828_25406886_25407196_25407254_25409697_25409792_25413644_25414505_25414598_25414701_25415465_25417740_25418154
H1_mix_00068123	chr4	+	2089	7	FSM	ENSG00000053900.11	ENST00000515848.1	2089	7	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_3	30.3118055476007	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAAGGAAGAAGTGT	NA	False	NA	NA	False	NA	NA	NA	25412917	25418261	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_25414386_25414465_25414505_25414598_25414701_25415465_25415541_25416424_25416599_25417615_25417740_25418154
H1_mix_00068126	chr4	+	8855	4	FSM	ENSG00000169851.15	ENST00000509759.2	865	4	-4139	-3851	-27	0	multi-exon	FALSE	canonical	0	0	junction_3	10.8730042868667	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTAAGTGTACTTCTCTG	8	True	NA	33	True	ATTAAA	-27	NA	30720387	31146805	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_30724597_30920152_30920370_30950119_30950216_31142472
H1_mix_00068127	chr4	+	8735	3	FSM	ENSG00000169851.15	ENST00000511884.6	6769	3	-1966	0	-27	0	multi-exon	FALSE	canonical	0	0	junction_2	12	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTAAGTGTACTTCTCTG	8	True	NA	33	True	ATTAAA	-27	NA	30720387	31146805	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_30724597_30920152_30920346_31142472
H1_mix_00068128	chr4	+	3480	4	FSM	ENSG00000154274.15	ENST00000381980.9	3643	4	5	158	5	-158	multi-exon	FALSE	canonical	1	4	junction_1	1.69967317119759	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCCACGTATCAATGACCC	-13	True	NA	NA	False	NA	NA	NA	37453929	37593352	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_37454041_37558026_37558077_37588845_37588900_37590087
H1_mix_00068131	chr4	+	4499	20	NNC	ENSG00000065882.17	novel	5703	20	NA	NA	-390	-1	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_2	117.162221511819	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTGGTTCCTTTTTGA	15	True	NA	9	True	AATAAA	-15	NA	37890693	38137618	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_37891349_37902002_37902513_38014508_38014974_38018353_38018444_38020590_38020696_38021585_38021719_38027787_38027880_38035587_38035699_38044361_38044491_38045816_38045904_38049617_38049860_38054198_38054339_38089931_38090118_38095928_38096091_38102998_38103158_38115709_38115955_38118032_38118193_38124961_38125132_38133083_38133258_38137134
H1_mix_00068133	chr4	+	3161	19	NIC	ENSG00000065882.17	novel	5703	20	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	58	junction_10	90.9249622789699	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTGGTTCCTTTTTGA	NA	False	NA	9	True	AATAAA	-15	NA	38014882	38137618	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_38014974_38018353_38018444_38020590_38020696_38021585_38021719_38027787_38027880_38035587_38035699_38044361_38044491_38045816_38045904_38049617_38049899_38051898_38052061_38054198_38054339_38089931_38090118_38095928_38096091_38102998_38103158_38115709_38115955_38118032_38118193_38124961_38125132_38133083_38133258_38137134
H1_mix_00068136	chr4	+	2993	10	NIC	ENSG00000109790.18	novel	2926	11	NA	NA	-232	-1	combination_of_known_splicesites	FALSE	canonical	3	22	junction_1	55.9207993725871	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATTGAGATGTCTAAGAT	-12	True	NA	7	True	GATAAA	-16	NA	39044806	39122205	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_39045097_39081102_39081240_39081962_39082160_39086514_39086728_39096691_39096879_39103286_39103512_39107568_39107732_39113019_39113233_39115158_39115331_39121009
H1_mix_00068137	chr4	+	2947	11	FSM	ENSG00000109790.18	ENST00000508137.6	2926	11	-21	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	24.871871662583	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAGATGTCTAAGATGCT	38	False	NA	10	True	GATAAA	-19	NA	39045038	39122208	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_39045097_39075964_39076148_39081102_39081240_39081962_39082160_39086514_39086728_39096691_39096879_39103286_39103512_39107568_39107732_39113019_39113233_39115158_39115331_39121009
H1_mix_00068138	chr4	+	6160	36	NIC	ENSG00000157796.18	novel	4395	37	NA	NA	-2	0	intron_retention	FALSE	canonical	1	3	junction_19	15.7434534499459	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTGACGTTTTTCTGG	26	False	NA	13	True	AATAAA	-14	NA	39182545	39285810	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_39182564_39185725_39185818_39186538_39186605_39189655_39189782_39194543_39194660_39199477_39199594_39203641_39203723_39205153_39205267_39205562_39205737_39214600_39214672_39215840_39216014_39216095_39216211_39217133_39217241_39217982_39218106_39224883_39225034_39228209_39228358_39228485_39228691_39231796_39231957_39232161_39232309_39234765_39234876_39240276_39240335_39244247_39244389_39244469_39244553_39245368_39245453_39253145_39253293_39253905_39254031_39255847_39255961_39257485_39257555_39266062_39266141_39267994_39268092_39269975_39270101_39272979_39274959_39277019_39277144_39278130_39278208_39278538_39278664_39285486
H1_mix_00068139	chr4	+	2613	4	FSM	ENSG00000255458.8	ENST00000667934.1	2615	4	0	2	0	-1	multi-exon	FALSE	canonical	2	3	junction_1	5.43650214343336	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTGAGATCTTTGCATT	NA	False	NA	-13	True	AATAAA	-2	NA	39639106	39653513	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_39639295_39641693_39641793_39650376_39650455_39651265
H1_mix_00068140	chr4	+	9376	17	NIC	ENSG00000078177.14	novel	9720	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_2	27.7971867956094	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCAGTGTGAGGAAATCC	-15	True	NA	13	True	AATAAA	-14	NA	40056849	40158251	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_40057031_40073454_40073552_40102074_40103219_40106899_40107025_40112083_40112173_40113431_40113509_40117868_40118025_40119931_40122310_40123126_40123213_40124159_40124206_40126133_40126331_40131800_40131920_40136943_40137083_40142672_40142862_40144631_40144801_40152779_40152904_40154191
H1_mix_00068141	chr4	+	2595	2	ISM	ENSG00000179299.17	ENST00000473399.5	1759	6	-39	22635	0	-22635	5prime_fragment	FALSE	canonical	3	255	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTTTGTTTTTTGTTTC	-20	True	NA	NA	False	AATATA	-23	NA	40749924	40752821	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_40750301_40750602
H1_mix_00068142	chr4	+	3370	11	NIC	ENSG00000179299.17	novel	4839	12	NA	NA	12	-105	combination_of_known_junctions	FALSE	canonical	3	6	junction_7	84.089535615319	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTCTCAATTGCCTACC	31	True	NA	24	True	ATTAAA	-18	NA	40749975	40809880	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_40750301_40750602_40750992_40760433_40760493_40761170_40761302_40774264_40774418_40774766_40774951_40776048_40776260_40794374_40794477_40798786_40798905_40807060_40807185_40808306
H1_mix_00068143	chr4	+	862	6	FSM	ENSG00000154277.13	ENST00000514764.5	862	6	0	0	0	0	multi-exon	FALSE	canonical	3	2776	junction_4	101.832018540339	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGCTGATTCTCATTT	2958	False	NA	29	True	AATAAA	-21	NA	41260638	41268429	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_41260798_41261714_41261801_41261875_41261924_41263224_41263292_41264102_41264162_41267986
H1_mix_00068144	chr4	+	5729	20	FSM	ENSG00000064042.18	ENST00000381753.8	5705	20	-24	0	-24	0	multi-exon	FALSE	canonical	2	4	junction_1	6.12338508305221	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTATTCCATTAATTAT	4	True	NA	3	True	AATAAA	-14	NA	41612877	41700044	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_41613099_41613465_41613662_41619187_41619441_41644499_41644627_41646122_41646281_41646484_41646894_41650392_41650609_41661419_41661511_41662820_41662985_41666560_41666667_41671553_41671595_41676381_41676463_41680005_41680099_41680954_41681060_41682332_41682461_41684396_41684519_41685709_41685831_41689526_41689636_41692281_41692385_41697159
H1_mix_00068145	chr4	+	3182	18	NNC	ENSG00000014824.14	novel	6164	18	NA	NA	39	1145	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	157.868939554697	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAATGGTGATTTTTGA	13	False	NA	16	True	AATAAA	-16	NA	41990568	42087521	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_41990761_42001615_42001781_42018113_42018171_42020415_42020516_42022837_42022931_42023301_42023385_42035274_42035334_42038985_42039054_42049376_42049480_42060190_42060247_42062985_42063122_42065309_42065350_42066549_42066622_42067084_42067193_42070525_42070692_42075656_42075787_42078211_42078326_42086081
H1_mix_00068146	chr4	+	241	1	FSM	ENSG00000249212.1	ENST00000509767.1	915	1	15	659	15	-659	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGACTGAAATTGCCTTT	NA	False	NA	NA	False	NA	NA	NA	42029223	42029464	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_42029200_42029500
H1_mix_00068147	chr4	+	204	1	FSM	ENSG00000124399.4	ENST00000513465.1	390	1	209	-23	209	23	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCCTGCATAAATAAATTG	NA	False	NA	NA	False	NA	NA	NA	43899170	43899374	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_43899200_43899400
H1_mix_00068150	chr4	+	561	1	FSM	ENSG00000272936.1	ENST00000610267.1	561	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGTCTTGTGATTAAC	NA	False	NA	NA	False	AATAAA	-21	NA	44704404	44704965	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_44704400_44705000
H1_mix_00068154	chr4	+	5646	7	FSM	ENSG00000109171.15	ENST00000512093.5	4219	7	-131	-1296	-131	110	multi-exon	FALSE	canonical	3	14	junction_4	86.5301809903471	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTTGTATTGTTTATAA	NA	False	NA	NA	False	GATAAA	-13	NA	48377769	48426311	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_48378061_48379689_48379849_48382567_48382928_48383646_48383785_48394575_48394654_48420124_48420444_48422010
H1_mix_00068155	chr4	+	452	5	FSM	ENSG00000109180.15	ENST00000507546.5	496	5	-179	223	0	0	multi-exon	FALSE	canonical	3	574	junction_1	112.828409542987	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTATGAACAACATTGT	1	True	NA	-61	True	NA	NA	NA	48831043	48848446	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_48831250_48832619_48832683_48833400_48833482_48842635_48842690_48848398
H1_mix_00068157	chr4	+	1312	8	FSM	ENSG00000109180.15	ENST00000396448.6	1306	8	-6	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	270.765505897028	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCCTCATCTTCCTTGAT	-19	True	NA	29	True	AATAAA	-19	NA	48831058	48861248	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_48831250_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48852021_48860724
H1_mix_00068162	chr4	+	4269	11	FSM	ENSG00000109184.15	ENST00000451288.6	4269	11	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	132.634422379713	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGATGTGTAAATTTTTT	56	False	NA	16	True	AATAAA	-23	NA	51843578	51916835	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_51843743_51863436_51863508_51863669_51863710_51874270_51874386_51877762_51877855_51886567_51886639_51891759_51891852_51899269_51899379_51911069_51911175_51913289_51913393_51913528
H1_mix_00068166	chr4	+	3484	19	NIC	ENSG00000145216.16	novel	3396	18	NA	NA	-62	0	combination_of_known_junctions	TRUE	canonical	3	130	junction_14	119.78814890165	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTATTTGTGATTTTTCT	NA	False	NA	23	True	TATAAA	-35	NA	53377578	53460861	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_53377924_53379072_53379118_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53391429_53391499_53399729_53399840_53414614_53414723_53425871_53425966_53428026_53428184_53440581_53440609_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
H1_mix_00068167	chr4	+	1464	13	FSM	ENSG00000145216.16	ENST00000513975.5	1464	13	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_12	124.161073699538	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGATTTTTTAATTTTAGTC	89	False	NA	NA	False	NA	NA	NA	53377842	53440983	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_53377924_53379072_53379118_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53391429_53391499_53399729_53399840_53425871_53425966_53428026_53428184_53440581
H1_mix_00068170	chr4	+	6631	23	NNC	ENSG00000134853.12	novel	1146	5	NA	NA	2746	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	6.62389862979886	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAAGGTTTCAGCATTTT	1090	False	NA	8	True	AATAAA	-21	NA	54233067	54298245	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_54233444_54258756_54258818_54261094_54261413_54263666_54263928_54264918_54265050_54267288_54267461_54267551_54267742_54270632_54270749_54272393_54272521_54273536_54273731_54274530_54274626_54274840_54274974_54277387_54277493_54277895_54278007_54278361_54278516_54280315_54280483_54285370_54285487_54285840_54285964_54287429_54287542_54288798_54288899_54289008_54289115_54290312_54290555_54295124
H1_mix_00068171	chr4	+	5191	21	FSM	ENSG00000157404.17	ENST00000686011.1	5135	21	-44	-12	9	0	multi-exon	FALSE	canonical	3	115	junction_14	68.6129725343539	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGTCATTTGATTGTTG	96	False	NA	15	True	AATAAA	-20	NA	54657897	54740715	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_54658082_54695511_54695782_54698283_54698566_54699629_54699767_54703723_54703893_54707097_54707288_54709423_54709540_54723583_54723699_54725856_54726039_54727217_54727325_54727415_54727543_54727822_54727928_54728010_54728122_54729334_54729486_54731330_54731420_54731870_54731999_54733069_54733193_54736497_54736610_54736720_54736821_54737174_54737281_54738428
H1_mix_00068172	chr4	+	746	4	FSM	ENSG00000157404.17	ENST00000512959.1	746	4	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_1	81.5284544738148	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTAATTTTGGGGCATG	2495	False	NA	NA	False	AATAGA	-15	NA	54729291	54733401	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_54729486_54731327_54731420_54731870_54731999_54733069
H1_mix_00068175	chr4	+	639	1	FSM	ENSG00000272969.1	ENST00000609234.1	778	1	-1	140	-1	-140	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTGGTCCACATGAGAA	NA	False	NA	NA	False	NA	NA	NA	55547110	55547749	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_55547100_55547700
H1_mix_00068176	chr4	+	672	4	FSM	ENSG00000090989.18	ENST00000505501.1	818	4	0	146	0	-146	multi-exon	FALSE	canonical	3	100	junction_3	10.6562449087639	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGCCTTTATAGTGTGTT	4620	False	NA	NA	False	NA	NA	NA	55858338	55868607	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_55858448_55860410_55860542_55864226_55864387_55868335
H1_mix_00068178	chr4	+	2216	6	FSM	ENSG00000174799.11	ENST00000422247.6	2092	6	-43	-81	-43	81	multi-exon	FALSE	canonical	3	47	junction_4	5.27636238330917	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCAGGAGAATCTCTTGA	0	True	NA	NA	False	NA	NA	NA	55948827	55961006	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_55949060_55952085_55952244_55953084_55953276_55954215_55954384_55957222_55957365_55959681
H1_mix_00068180	chr4	+	6908	10	NIC	ENSG00000109265.15	novel	7044	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_5	10.788654305723	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCGGCACTGATGGAATT	-17	True	NA	5	True	AATAAA	-15	NA	56049097	56330609	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_56049300_56179283_56179431_56272320_56272493_56307534_56307700_56310665_56310735_56313196_56313380_56314039_56316690_56323376_56323568_56324103_56324267_56327643
H1_mix_00068181	chr4	+	7044	11	FSM	ENSG00000109265.15	ENST00000682029.1	7044	11	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_4	12.3486841404257	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCGGCACTGATGGAATT	-17	True	NA	5	True	AATAAA	-15	NA	56049097	56330609	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_56049300_56179283_56179431_56272320_56272493_56298213_56298350_56307534_56307700_56310665_56310735_56313196_56313380_56314039_56316690_56323376_56323568_56324103_56324267_56327643
H1_mix_00068182	chr4	+	529	1	FSM	ENSG00000269921.1	ENST00000602927.1	529	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	194	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCTGGTGGCAGAATAAT	106	False	NA	NA	False	TTTAAA	-5	NA	56387624	56388153	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_56387600_56388200
H1_mix_00068183	chr4	+	3297	10	FSM	ENSG00000128050.9	ENST00000399688.7	3297	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1222.25839340416	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTTTCATGGTCTCTG	-6	True	NA	25	True	ATTAAA	-18	NA	56436137	56461361	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_56436329_56441662_56441861_56446356_56446378_56446694_56446874_56448417_56448598_56448709_56448824_56450618_56450703_56451871_56452053_56453602_56453762_56459371
H1_mix_00068184	chr4	+	1006	12	FSM	ENSG00000174780.17	ENST00000505314.2	1006	12	0	0	0	0	multi-exon	FALSE	canonical	2	33	junction_8	181.411681947739	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCATGTATAGCCATGAAG	120	False	NA	NA	False	NA	NA	NA	56467735	56489401	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_56467745_56469652_56469774_56471719_56471844_56474053_56474198_56474279_56474392_56476670_56476703_56478378_56478504_56478591_56478650_56484735_56484865_56486324_56486398_56487948_56488014_56489387
H1_mix_00068185	chr4	+	821	4	FSM	ENSG00000196503.5	ENST00000360096.3	1392	4	208	363	208	-363	multi-exon	FALSE	canonical	2	3	junction_1	0.816496580927726	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACTGAAGAATAATAACACA	94	False	NA	108	True	AGTAAA	-3	NA	56505416	56524085	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_56505510_56511184_56511348_56518677_56518854_56523696
H1_mix_00068186	chr4	+	2678	1	FSM	ENSG00000248590.2	ENST00000510885.2	2678	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGCCATTTTCTGAAC	548	False	NA	NA	False	NA	NA	NA	56593003	56595681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_56593000_56595700
H1_mix_00068187	chr4	+	8068	4	FSM	ENSG00000084093.19	ENST00000675105.1	7371	4	-697	0	399	0	multi-exon	FALSE	canonical	3	7	junction_1	158.896891795347	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAATAAAGTTTTAAAAAC	20	False	NA	-13	True	NA	NA	NA	56908492	56935822	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_56909588_56910629_56911537_56919786_56919871_56929840
H1_mix_00068189	chr4	+	4248	26	NNC	ENSG00000047315.17	novel	4108	26	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	115.18715206133	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTGTGATCTTTATTT	21	True	NA	32	True	AATAAA	-16	NA	56977761	57031158	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_56977969_56978639_56979005_56986353_56986427_56990747_56990899_56994403_56994517_56994646_56994867_56995250_56995410_56999616_56999782_57005245_57005443_57005599_57005720_57006815_57007003_57010360_57010505_57010747_57010888_57010988_57011101_57015501_57015657_57017042_57017242_57017559_57017729_57020898_57020996_57022151_57022247_57023329_57023581_57023661_57023752_57024004_57024113_57024885_57025000_57025376_57025538_57030203_57030400_57030898
H1_mix_00068196	chr4	+	950	2	Genic_Genomic	ENSG00000243199.1	novel	870	1	NA	NA	-9	85031	multi-exon	FALSE	non_canonical	0	0	junction_1	0	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAAAGGTAAAGCATAGAT	9	False	NA	NA	False	NA	NA	NA	65573449	65659359	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr4_+_65574362_65659321
H1_mix_00068198	chr4	+	1182	1	FSM	ENSG00000227725.3	ENST00000509133.1	1104	1	19	-97	19	97	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAATTTTATAAAGTTACA	NA	False	NA	NA	False	NA	NA	NA	68038562	68039744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_68038600_68039700
H1_mix_00068200	chr4	+	7631	2	Intergenic	novelGene_1035	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGATCTAGTTTCCTCTT	NA	False	NA	11	True	AATAAA	-21	NA	68407210	68427635	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_68407457_68420250
H1_mix_00068201	chr4	+	3599	17	NIC	ENSG00000018189.13	novel	2143	12	NA	NA	338	-174	combination_of_known_splicesites	FALSE	canonical	2	9	junction_15	37.3779263068459	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAATTCTGGGGTGGAAA	27	True	NA	-46	True	NA	NA	NA	70705138	70808445	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_70705295_70762518_70762693_70763551_70763670_70764474_70764577_70768537_70768662_70773510_70773573_70775167_70775234_70778368_70778439_70783090_70783184_70784795_70784880_70788805_70788974_70789494_70789593_70793784_70793905_70794794_70794895_70800140_70800206_70804347_70804417_70806515
H1_mix_00068205	chr4	+	609	4	FSM	ENSG00000173542.9	ENST00000509041.5	2056	4	-10	1457	-10	32	multi-exon	FALSE	canonical	3	70	junction_1	9.56846672960488	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAATTAATTTTTGTAAG	-16	True	NA	NA	False	NA	NA	NA	70902336	70975286	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_70902551_70958873_70959041_70969930_70970025_70975152
H1_mix_00068207	chr4	+	1177	4	FSM	ENSG00000163739.5	ENST00000395761.4	1174	4	-69	66	-69	-66	multi-exon	FALSE	canonical	0	0	junction_3	2.49443825784929	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTTGATTTTTGGGGGG	230	False	NA	NA	False	AATAAA	-17	NA	73869323	73871242	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_73869571_73869668_73869793_73869905_73869990_73870520
H1_mix_00068208	chr4	+	1321	3	FSM	ENSG00000174796.12	ENST00000504384.5	1132	3	3	-192	3	192	multi-exon	FALSE	canonical	3	65	junction_2	4.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTGGAAAATTCAGGGAG	-5	True	NA	NA	False	NA	NA	NA	75514440	75517912	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_75514521_75515432_75515533_75516771
H1_mix_00068209	chr4	+	3323	6	FSM	ENSG00000174796.12	ENST00000507556.5	1134	6	-32	-2157	3	454	multi-exon	FALSE	canonical	3	16	junction_4	23.6643191323985	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAACAGTGATGCTTAGG	-5	True	NA	NA	False	NA	NA	NA	75514440	75545116	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_75514521_75515432_75515533_75516771_75516980_75521735_75521862_75539858_75539960_75542408
H1_mix_00068210	chr4	+	5708	11	ISM	ENSG00000138768.15	ENST00000264904.8	4135	26	71744	0	-8667	0	3prime_fragment	FALSE	canonical	3	741	junction_1	213.352033034607	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGAGGCGACTTTTCTTA	NA	False	NA	18	True	AATAAA	-19	NA	75796341	75814286	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_75799733_75800350_75800470_75800617_75800800_75801078_75801201_75804133_75804273_75805139_75805304_75806485_75806573_75808952_75809052_75810431_75810540_75812159_75812376_75813205
H1_mix_00068214	chr4	+	2525	9	FSM	ENSG00000138758.12	ENST00000502584.5	2615	9	0	90	0	-90	multi-exon	FALSE	canonical	3	522	junction_8	46.9813792900975	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACTTAGTCTTGGTGAAT	-2	True	NA	NA	False	NA	NA	NA	76949750	77032068	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_76949931_76996424_76996540_77005600_77005797_77011734_77011922_77014855_77015018_77019164_77019262_77020501_77020671_77028628_77028762_77030782
H1_mix_00068217	chr4	+	580	4	FSM	ENSG00000169288.18	ENST00000511521.1	580	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	198.488174850684	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTGCTGTATTTACAGA	-4	True	NA	NA	False	NA	NA	NA	77862867	77885318	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_77863014_77871743_77871856_77883241_77883501_77885255
H1_mix_00068218	chr4	+	832	6	FSM	ENSG00000169288.18	ENST00000506674.1	832	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	196.000612243942	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGACATGAAATTAAGGTAGA	NA	False	NA	NA	False	TTTAAA	-4	NA	77883248	77909312	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_77883501_77885255_77885340_77887219_77887292_77894138_77894251_77906945_77907211_77909265
H1_mix_00068219	chr4	+	15991	73	NIC	ENSG00000138759.20	novel	15871	74	NA	NA	-348	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_49	46.431598353032	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGTTTTCCTATGTT	4	True	NA	25	True	AATAAA	-19	NA	78056974	78544269	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_78058086_78065984_78066017_78237509_78237618_78245232_78245326_78252391_78252552_78255241_78255376_78265024_78265109_78266833_78266936_78267240_78267433_78278654_78278745_78281397_78281434_78282819_78282968_78284404_78284549_78286404_78286540_78308065_78308210_78315593_78315735_78317367_78317509_78318809_78318987_78333271_78333413_78337673_78337818_78363512_78363666_78363907_78364055_78369837_78369985_78372717_78372859_78374110_78374252_78375738_78375880_78379725_78379997_78384058_78384144_78387374_78387702_78400733_78400888_78407662_78407842_78412968_78413086_78418948_78419064_78421862_78422001_78424387_78424421_78429094_78429227_78430291_78430418_78432356_78432605_78438569_78438719_78438901_78439065_78441161_78441298_78445521_78445713_78446726_78446881_78448052_78448317_78450150_78450340_78451771_78451892_78452174_78452355_78464020_78464146_78464442_78464584_78469977_78470092_78472179_78472331_78473437_78473598_78475437_78475607_78477814_78478062_78479373_78479719_78481803_78481965_78482387_78482536_78488874_78489081_78496804_78496962_78499720_78499922_78507420_78507609_78508730_78509007_78511273_78511507_78513391_78513553_78515798_78516014_78519330_78519482_78521522_78521631_78522648_78522809_78526540_78526658_78534448_78534616_78536994_78537201_78539293_78539441_78540530
H1_mix_00068220	chr4	+	2871	19	FSM	ENSG00000138759.20	ENST00000502446.6	2871	19	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_18	17.9698822107065	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAAACCCAATTGCCTTTT	165	False	NA	NA	False	ATTAAA	-24	NA	78057569	78319653	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_78058086_78065984_78066017_78237509_78237618_78245232_78245326_78252391_78252552_78255241_78255376_78265024_78265109_78266833_78266936_78267240_78267433_78278654_78278745_78281397_78281434_78282819_78282968_78284404_78284549_78286404_78286540_78308065_78308210_78315593_78315735_78317367_78317509_78318809_78318987_78319359
H1_mix_00068222	chr4	+	534	4	FSM	ENSG00000138756.19	ENST00000505725.1	566	4	32	0	32	0	multi-exon	FALSE	canonical	3	67	junction_1	10.6562449087639	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGATTTGATTTCCTGAC	NA	False	NA	2	True	AATAAA	-5	NA	78850923	78865773	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_78851057_78859583_78859688_78861388_78861469_78865556
H1_mix_00068223	chr4	+	1703	5	FSM	ENSG00000145293.17	ENST00000505846.5	1689	5	-14	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	312.805450719772	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTTTTATATAGGTTCC	4	True	NA	15	True	AATAAA	-16	NA	82430647	82461087	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_82430885_82447919_82448022_82454721_82454855_82456914_82457039_82459980
H1_mix_00068225	chr4	+	821	4	FSM	ENSG00000168152.13	ENST00000514244.5	821	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	60.4005150824248	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTCCATCCTCAGAAC	-10	True	NA	NA	False	AAGAAA	-17	NA	82900702	82907915	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_82900883_82904735_82904942_82906323_82906628_82907784
H1_mix_00068227	chr4	+	2369	11	FSM	ENSG00000138663.9	ENST00000503682.5	1702	11	-646	-21	114	0	multi-exon	FALSE	canonical	2	4	junction_7	226.856540571349	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAAGAGTATTTTGTTCCC	NA	False	NA	36	True	AATAAA	-44	NA	83034560	83075818	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_83035299_83045625_83045706_83049165_83049318_83049880_83049985_83056925_83057080_83057257_83057409_83063075_83063247_83065059_83065156_83066437_83066554_83068437_83068523_83075296
H1_mix_00068229	chr4	+	350	4	FSM	ENSG00000163319.11	ENST00000507349.5	350	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	860.418631959015	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTTGTATGATGCCAATA	-7	True	NA	34	True	AATAAA	-40	NA	83456054	83461237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_83456178_83456908_83456959_83460972_83461033_83461120
H1_mix_00068230	chr4	+	2609	12	FSM	ENSG00000138678.11	ENST00000264409.5	2928	12	316	3	117	0	multi-exon	FALSE	canonical	2	3	junction_9	3.33278232360425	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTGTTGCATTATTC	41	False	NA	3	True	AATAAA	-13	NA	83536423	83605872	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_83536764_83544535_83544603_83581561_83581833_83587254_83587330_83588209_83588300_83590198_83590293_83594844_83594961_83596857_83596914_83597429_83597516_83598050_83598180_83598643_83598724_83604667
H1_mix_00068231	chr4	+	4420	12	NIC	ENSG00000163624.6	novel	4309	13	NA	NA	-231	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_10	32.2746478301775	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTTTGTTGTGCCAT	-4	True	NA	14	True	AATAAA	-17	NA	84582895	84651334	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_84583519_84604242_84604371_84609428_84609526_84617563_84617662_84619393_84619534_84631818_84631878_84633856_84633940_84635263_84635352_84638923_84638993_84640837_84640991_84645221_84645326_84648556
H1_mix_00068232	chr4	+	3380	5	FSM	ENSG00000180769.10	ENST00000651209.1	3364	5	-16	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	5.53962995154008	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTACTAAATATGAAAAATA	14	True	NA	-31	True	NA	NA	NA	84966792	85008706	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_84967128_84969724_84969877_85004229_85004328_85005473_85005569_85006006
H1_mix_00068233	chr4	+	3241	5	FSM	ENSG00000180769.10	ENST00000318186.8	3241	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	3.77491721763537	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCACATACTTTCTCTACT	156	False	NA	-8	True	AATAAA	-2	NA	84966934	85008729	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_84967128_84969724_84969877_85000690_85000766_85004229_85004328_85006006
H1_mix_00068234	chr4	+	4851	5	NNC	ENSG00000138639.18	novel	725	5	NA	NA	-39243	3274	intron_retention	FALSE	canonical	3	51	junction_1	8.347903928532	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGATTTGTTGATCCAC	NA	False	NA	NA	False	NA	NA	NA	85884490	85979040	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_85884725_85923647_85923771_85942065_85942274_85972035_85972169_85974887
H1_mix_00068235	chr4	+	8580	48	FSM	ENSG00000163629.13	ENST00000436978.5	8573	48	-7	0	-7	0	multi-exon	FALSE	canonical	3	27	junction_25	74.0913510022958	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATTAGACATTTTCAGT	-10	True	NA	33	True	AATAAA	-41	NA	86594307	86815171	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_86594790_86635251_86635372_86672364_86672544_86686709_86686776_86689004_86689191_86693586_86693675_86701240_86701802_86716529_86716626_86717023_86717118_86722211_86722435_86732399_86732475_86732591_86732767_86734302_86734457_86734736_86734876_86735593_86735747_86741633_86741817_86744965_86745129_86750469_86750888_86751026_86751125_86753008_86753066_86758259_86758350_86758677_86758786_86758941_86759074_86762726_86763191_86764592_86764740_86765394_86765489_86766431_86766518_86767816_86767977_86769768_86769984_86770100_86770200_86771170_86771536_86772777_86772959_86774372_86774532_86775170_86775343_86775441_86775653_86780401_86780473_86782200_86782263_86784464_86784559_86785230_86785369_86785847_86785937_86796873_86796930_86799100_86799205_86803708_86803858_86805278_86805370_86807559_86807898_86809768_86809985_86811045_86811109_86814455
H1_mix_00068237	chr4	+	8084	47	NNC	ENSG00000163629.13	novel	8573	48	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_9	77.388898350485	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTGTGCAGACAAATTAGA	385	False	NA	23	True	AATAAA	-31	NA	86594733	86815161	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_86594790_86635251_86635372_86672364_86672544_86686709_86686776_86689004_86689191_86693586_86693675_86701240_86701802_86716529_86716626_86717023_86717118_86722214_86722435_86732399_86732475_86732591_86732767_86734302_86734457_86734736_86734876_86735593_86735747_86741633_86741817_86744965_86745129_86750469_86750888_86751026_86751125_86758259_86758350_86758677_86758786_86758941_86759074_86762726_86763191_86764592_86764740_86765394_86765489_86766431_86766518_86767816_86767977_86769768_86769984_86770100_86770200_86771170_86771536_86772777_86772959_86774372_86774532_86775170_86775343_86775441_86775653_86780401_86780473_86782200_86782263_86784464_86784559_86785230_86785369_86785847_86785937_86796873_86796930_86799100_86799205_86803708_86803858_86805278_86805370_86807559_86807898_86809768_86809985_86811045_86811109_86814455
H1_mix_00068238	chr4	+	315	1	FSM	ENSG00000250202.2	ENST00000512654.2	315	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACATACACAGTGTATCT	NA	False	NA	NA	False	AAGAAA	-21	NA	86876337	86876652	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_86876300_86876700
H1_mix_00068239	chr4	+	1187	3	NNC	ENSG00000172493.23	novel	1668	3	NA	NA	28	17733	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	48.5	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGACTGGGTTTTCATGTT	14	False	NA	NA	False	AATAAA	-18	NA	86935101	86991801	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_86935241_86948497_86948572_86990827
H1_mix_00068243	chr4	+	3510	4	Intergenic	novelGene_1049	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	195	junction_2	208.499933386613	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTTTCATTTCATTCTTG	NA	False	NA	17	True	AATAAA	-23	NA	87922140	87934278	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_87922401_87924311_87924395_87926723_87926987_87931374
H1_mix_00068244	chr4	+	3272	3	Intergenic	novelGene_1064	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	238	junction_1	106.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCAAAACAACTTTCATTT	NA	False	NA	9	True	AATAAA	-15	NA	87922160	87934270	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_87922401_87924258_87924395_87931374
H1_mix_00068249	chr4	+	677	2	FSM	ENSG00000138642.16	ENST00000506842.1	706	2	29	0	29	0	multi-exon	FALSE	canonical	3	50	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACAGGTGGGTAGCTACT	NA	False	NA	NA	False	NA	NA	NA	88439873	88440640	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_88440058_88440147
H1_mix_00068250	chr4	+	719	6	FSM	ENSG00000138641.18	ENST00000431413.5	761	6	42	0	-4	0	multi-exon	FALSE	canonical	1	1	junction_3	5.87877538267963	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGCTGAACCAGCAAACAA	2	True	NA	NA	False	AATACA	-1	NA	88592475	88652020	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_88592575_88595556_88595615_88597949_88598088_88605794_88606050_88649839_88650000_88652011
H1_mix_00068251	chr4	+	1255	9	FSM	ENSG00000138641.18	ENST00000407637.5	2634	9	-20	1399	-4	-1399	multi-exon	FALSE	canonical	3	7	junction_6	2.91279504943276	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAATGATTGTCTCTGG	2	True	NA	NA	False	NA	NA	NA	88592475	88656035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_88592575_88595556_88595615_88605794_88606050_88649839_88650000_88652011_88652089_88652868_88653091_88654041_88654134_88655173_88655305_88655874
H1_mix_00068253	chr4	+	6011	1	Intergenic	novelGene_1078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGCTATCATAAAAAATTC	NA	False	NA	NA	False	NA	NA	NA	91623690	91629701	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_91623700_91629700
H1_mix_00068255	chr4	+	257	2	Intergenic	novelGene_1081	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTCACAGTGGAGGATC	NA	False	NA	NA	False	NA	NA	NA	92026216	92028190	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_92026389_92028105
H1_mix_00068256	chr4	+	614	1	Intergenic	novelGene_1083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGGGGATGTAAGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	92438989	92439603	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_92439000_92439600
H1_mix_00068259	chr4	+	893	4	FSM	ENSG00000163110.15	ENST00000509333.5	743	4	-64	-86	7	86	multi-exon	FALSE	canonical	3	213	junction_3	32.6224190124249	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATGTCTTCAAAATAATT	135	False	NA	NA	False	NA	NA	NA	94451863	94573821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_94451996_94455246_94455385_94523723_94523876_94573350
H1_mix_00068261	chr4	+	824	6	FSM	ENSG00000138698.15	ENST00000507303.5	875	6	-121	172	-2	0	multi-exon	FALSE	canonical	3	62	junction_1	54.9836339286519	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTCTTAGTCATGAACC	-18	True	NA	NA	False	NA	NA	NA	98261381	98392080	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_98261570_98293404_98293516_98343138_98343262_98352475_98352602_98379016_98379164_98391951
H1_mix_00068267	chr4	+	718	8	FSM	ENSG00000164024.12	ENST00000507537.5	718	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	208.314127005837	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAATGAAGTCATTTGCC	-10	True	NA	NA	False	NA	NA	NA	98995720	99043319	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_98995868_99005768_99005867_99028866_99028919_99034229_99034343_99035399_99035461_99039373_99039466_99041042_99041127_99043248
H1_mix_00068268	chr4	+	2542	10	NIC	ENSG00000164024.12	novel	2686	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_8	144.346376965998	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTAGTCATTAACTTTG	-10	True	NA	27	True	ATTAAA	-21	NA	98995720	99062809	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_98995868_99028866_99028919_99034229_99034343_99035399_99035461_99039373_99039466_99041042_99041127_99043248_99043388_99045178_99045311_99057752_99057819_99061153
H1_mix_00068269	chr4	+	1442	4	ISM	ENSG00000164024.12	ENST00000296411.11	2686	11	33	26247	0	1102	5prime_fragment	FALSE	canonical	3	451	junction_2	35.4620297720753	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTGCCATCTATACACAAA	23	False	NA	NA	False	NA	NA	NA	98995753	99036562	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_98995868_99028866_99028919_99034229_99034343_99035399
H1_mix_00068270	chr4	+	4540	12	NNC	ENSG00000164024.12	novel	2686	11	NA	NA	0	2521	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	135.528655748242	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCACACTTGTGGCAGTG	23	False	NA	NA	False	NA	NA	NA	98995753	99065330	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_98995868_99028866_99028919_99034229_99034343_99035399_99035461_99039373_99039466_99041042_99041127_99043248_99043388_99045178_99045311_99048732_99048877_99057752_99057819_99061153_99062807_99063440
H1_mix_00068271	chr4	+	2602	11	NIC	ENSG00000164024.12	novel	2686	11	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_2	136.073362565934	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTAGTCATTAACTTTG	71	False	NA	27	True	ATTAAA	-21	NA	98995801	99062809	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_98995868_99028866_99028919_99034232_99034343_99035399_99035461_99039373_99039466_99041042_99041127_99043248_99043388_99045178_99045311_99048732_99048877_99057752_99057819_99061153
H1_mix_00068272	chr4	+	8136	9	ISM	ENSG00000164024.12	ENST00000296411.11	2686	11	35381	-2521	-8101	2521	3prime_fragment	FALSE	canonical	3	376	junction_7	43.6718945661852	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCACACTTGTGGCAGTG	8337	False	NA	NA	False	NA	NA	NA	99031101	99065330	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_99034343_99035399_99035461_99039373_99039466_99041042_99041127_99043248_99043388_99045178_99045311_99048732_99048877_99057752_99057819_99061153
H1_mix_00068275	chr4	+	429	5	FSM	ENSG00000153064.12	ENST00000504403.1	2090	5	1661	0	1661	0	multi-exon	FALSE	canonical	2	4	junction_4	0.82915619758885	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTTGAAAATTCTCTCA	NA	False	NA	NA	False	ATTAAA	-24	NA	102063076	102074220	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_102063139_102071274_102071305_102072344_102072401_102073683_102073749_102074004
H1_mix_00068277	chr4	+	956	1	FSM	ENSG00000251288.2	ENST00000513388.2	1241	1	191	94	191	-94	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATAGGGACACAGGGCTAC	NA	False	NA	NA	False	NA	NA	NA	102751591	102752547	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_102751600_102752500
H1_mix_00068278	chr4	+	908	2	FSM	ENSG00000246560.3	ENST00000501133.3	1351	2	489	-46	-188	46	multi-exon	FALSE	canonical	3	11	junction_1	0	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGGTGGCCACAGGAAAT	134	False	NA	NA	False	NA	NA	NA	102828099	102844145	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_102828186_102843323
H1_mix_00068279	chr4	+	4942	3	FSM	ENSG00000168769.14	ENST00000413648.2	4973	3	0	31	0	-31	multi-exon	FALSE	canonical	0	0	junction_1	2.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTCATAGAATAAAGTTAT	-13	True	NA	-5	True	AATAAA	-20	NA	105146885	105242731	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_105146980_105233896_105237352_105241338
H1_mix_00068282	chr4	+	568	5	FSM	ENSG00000164022.18	ENST00000510207.5	568	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	259.567428619232	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTCCCGTCTGGATCT	0	True	NA	NA	False	AAAACA	-38	NA	106315543	106331730	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_106315637_106324984_106325119_106327450_106327565_106328075_106328244_106331671
H1_mix_00068283	chr4	+	1607	8	FSM	ENSG00000164022.18	ENST00000672337.1	1607	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	268.212830507751	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACCAAAAGACATTAGAGAAA	4	True	NA	-39	True	AATAAA	-12	NA	106316549	106347704	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_106316595_106320865_106321452_106324984_106325119_106327450_106327565_106328075_106328244_106331671_106331884_106336868_106337038_106347525
H1_mix_00068284	chr4	+	2715	7	FSM	ENSG00000164022.18	ENST00000673123.1	2710	7	-5	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	228.901482932918	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATATGTCATTCTTTTGGG	4	True	NA	-28	True	AATGAA	-24	NA	106316549	106349183	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_106316810_106324984_106325119_106327450_106327565_106328075_106328244_106331671_106331884_106336868_106337038_106347525
H1_mix_00068287	chr4	+	1835	8	FSM	ENSG00000138796.18	ENST00000626637.2	1815	8	214	-234	-130	0	multi-exon	FALSE	canonical	2	9	junction_1	114.491243761081	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTAGGCAGAAGCTATT	59	False	NA	10	True	AGTAAA	-7	NA	108004695	108035157	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_108004918_108009758_108009888_108014430_108014589_108019539_108019667_108023473_108023564_108027687_108027761_108033175_108033293_108034238
H1_mix_00068288	chr4	+	457	6	NNC	ENSG00000109475.17	novel	546	5	NA	NA	0	30830	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	9335.93246333755	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGATTGTTTATTAGCTT	1	True	NA	NA	False	AATAAA	-1	NA	108620575	108661242	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_108620601_108621950_108622025_108622104_108622205_108622514_108622619_108625127_108625257_108661217
H1_mix_00068289	chr4	+	2303	2	FSM	ENSG00000109475.17	ENST00000503574.1	2627	2	0	324	0	-324	multi-exon	FALSE	canonical	3	24352	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGGAGATGATGGACAAC	-5	True	NA	NA	False	NA	NA	NA	108620625	108623008	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_108622025_108622104
H1_mix_00068290	chr4	+	853	6	FSM	ENSG00000109475.17	ENST00000394668.2	853	6	0	0	0	0	multi-exon	FALSE	canonical	3	511	junction_5	10818.5164713097	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTCTCTATGTGACCA	25	False	NA	30	True	TATAAA	-25	NA	108620655	108630412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_108620713_108621950_108622025_108622104_108622205_108622514_108622619_108625127_108625254_108630020
H1_mix_00068292	chr4	+	1130	2	FSM	ENSG00000005059.16	ENST00000494604.1	1130	2	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTGTTTGAAGTTCTCAA	NA	False	NA	17	True	ATTAAA	-17	NA	109684439	109687716	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_109685368_109687514
H1_mix_00068293	chr4	+	831	5	FSM	ENSG00000109534.17	ENST00000506840.5	831	5	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_1	71.8574978690463	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATAGCAAACCTCCCTTA	114	False	NA	NA	False	AATACA	-12	NA	109815634	109822566	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_109815805_109816152_109816379_109817935_109818091_109819000_109819061_109822346
H1_mix_00068294	chr4	+	406	4	FSM	ENSG00000138798.13	ENST00000504633.1	584	4	178	0	178	0	multi-exon	FALSE	canonical	3	10	junction_2	1.24721912892465	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCGTTCCTCTTAGCC	NA	False	NA	NA	False	NA	NA	NA	109959311	109963206	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_109959438_109960866_109960990_109961862_109961986_109963172
H1_mix_00068295	chr4	+	414	3	FSM	ENSG00000138798.13	ENST00000502579.1	580	3	166	0	166	0	multi-exon	FALSE	canonical	3	10	junction_1	2.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTGATTGAAATGGCCAA	NA	False	NA	NA	False	NA	NA	NA	109968970	109976171	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_109969120_109974702_109974808_109976011
H1_mix_00068296	chr4	+	3028	10	NIC	ENSG00000138798.13	novel	4489	23	NA	NA	-655	-750	intron_retention	FALSE	canonical	2	8	junction_7	4.49141842920172	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGATGGGAGGATGACTT	NA	False	NA	49	True	NA	NA	NA	109979985	110013005	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_109980140_109980825_109980976_109983421_109983542_109987743_109987861_109988583_109988710_109993246_109993370_109994732_109994881_109999678_109999847_110004504_110004623_110011201
H1_mix_00068298	chr4	+	491	3	FSM	ENSG00000138798.13	ENST00000537316.5	491	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTCGATGCACAGTATCT	NA	False	NA	NA	False	ATTAAA	-23	NA	110004500	110011491	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_110004623_110008151_110008231_110011201
H1_mix_00068299	chr4	+	571	3	FSM	ENSG00000138792.10	ENST00000502711.1	579	3	0	8	0	-8	multi-exon	FALSE	canonical	3	27	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTCATTTTTCTTTGGG	1261	False	NA	NA	False	NA	NA	NA	110549427	110553509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_110549633_110549715_110549887_110553314
H1_mix_00068300	chr4	+	1053	7	FSM	ENSG00000138660.12	ENST00000510527.5	1044	7	-9	0	-9	0	multi-exon	FALSE	canonical	3	377	junction_1	7.84573486395988	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCTTTGGGTGAGTTGT	-10	True	NA	NA	False	NA	NA	NA	112231730	112265319	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_112232175_112253207_112253257_112254746_112254774_112257771_112257798_112260765_112260863_112262987_112263087_112265008
H1_mix_00068303	chr4	+	1151	1	FSM	ENSG00000250966.2	ENST00000321285.4	411	1	-612	-128	-612	128	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCAAAAGAAACTACCATCA	NA	False	NA	NA	False	AAAAAG	-12	NA	112564375	112565526	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_112564400_112565500
H1_mix_00068304	chr4	+	2020	13	FSM	ENSG00000174720.17	ENST00000509622.5	2020	13	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_2	166.321705505392	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAAATGTGTTGATTTT	-32	True	NA	9	True	AATAAA	-17	NA	112637126	112657586	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_112637240_112644667_112644769_112646350_112646452_112646587_112646672_112646790_112646956_112647033_112647128_112647198_112647550_112647689_112647835_112649534_112649687_112650460_112650583_112653076_112653237_112654067_112654160_112657246
H1_mix_00068308	chr4	+	8064	45	FSM	ENSG00000145362.21	ENST00000672088.1	8080	45	16	0	1	0	multi-exon	FALSE	canonical	1	3	junction_1	17.4138374730325	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAAATGTGGCAACGGTG	-17	True	NA	9	True	AATAAA	-10	NA	112818109	113383725	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_112818265_112904454_112904515_113174415_113174518_113196367_113196467_113199010_113199110_113232160_113232260_113236986_113237173_113240484_113240584_113242110_113242210_113249763_113249863_113255734_113255933_113258049_113258149_113258312_113258412_113264896_113264996_113274451_113274650_113277836_113277936_113278459_113278559_113282674_113282873_113287604_113287704_113288387_113288487_113292415_113292515_113293439_113293539_113302766_113302840_113311254_113311400_113317706_113317810_113318516_113318621_113330245_113330471_113333053_113333209_113335845_113336058_113336576_113336782_113339225_113339323_113341687_113341917_113343016_113343143_113345899_113346023_113348275_113348309_113350227_113350250_113360822_113360898_113363337_113363470_113365038_113365183_113367565_113367852_113369513_113369806_113373089_113373174_113373284_113373450_113374763_113374947_113381456
H1_mix_00068309	chr4	+	2410	1	FSM	ENSG00000234841.4	ENST00000504528.2	1301	1	-454	-655	-454	655	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTCTGTCGCCCAGGCT	7625	False	NA	NA	False	NA	NA	NA	112825852	112828262	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_112825900_112828300
H1_mix_00068312	chr4	+	5915	25	FSM	ENSG00000145362.21	ENST00000673353.1	5956	25	41	0	-16	0	multi-exon	FALSE	canonical	3	9	junction_1	18.1857697726058	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAAATGTGGCAACGGTG	89	False	NA	9	True	AATAAA	-10	NA	113292965	113383725	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_113293300_113293439_113293539_113302766_113302840_113311254_113311400_113317706_113317810_113318516_113318621_113330245_113330471_113333053_113333209_113335845_113336058_113336576_113336782_113339225_113339323_113341687_113341917_113343016_113343143_113345899_113346023_113348275_113348309_113350227_113350250_113360822_113360898_113363337_113363470_113365038_113365183_113367565_113367852_113369513_113369806_113373089_113373174_113373284_113373450_113374763_113374947_113381456
H1_mix_00068313	chr4	+	877	2	FSM	ENSG00000269893.9	ENST00000665363.2	901	2	24	0	0	0	multi-exon	FALSE	canonical	3	811	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTGTTCCTTGACTGAG	-4	True	NA	15	True	AATAAA	-21	NA	118278754	118279823	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_118279432_118279623
H1_mix_00068314	chr4	+	1889	2	ISM	ENSG00000154608.14	ENST00000502249.6	4587	17	42347	38769	42347	-38769	internal_fragment	TRUE	canonical	3	80	junction_1	0	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGTATGACCTCAGCTC	NA	False	NA	NA	False	NA	NA	NA	118509936	118515331	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_118510031_118513536
H1_mix_00068316	chr4	+	263	1	NIC	ENSG00000154608.14	novel	4587	17	NA	NA	86213	-35	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGGAAGAGGAAGATGTT	NA	False	NA	NA	False	AATAGA	-11	NA	118553802	118554065	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_118553800_118554100
H1_mix_00068317	chr4	+	853	7	NNC	ENSG00000260404.4	novel	4395	10	NA	NA	4	9822	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	15.5857841210081	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTCAAGGGATTTCTCCC	33	False	NA	NA	False	NA	NA	NA	118591776	118619306	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_118591896_118595911_118596023_118597093_118597226_118605583_118605820_118608657_118608723_118618001_118618120_118619234
H1_mix_00068318	chr4	+	5833	6	NNC	ENSG00000260404.4	novel	4395	10	NA	NA	23425	1292	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	6.79411510058521	215	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCCAGAATTTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	118619336	118635021	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_118620077_118620413_118620611_118621462_118621528_118628035_118628227_118630288_118630347_118630439
H1_mix_00068320	chr4	+	432	4	FSM	ENSG00000145388.15	ENST00000502564.2	432	4	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_1	10.2740233382816	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTATTTTCAAATGAATAT	6091	False	NA	NA	False	AATGAA	-3	NA	118691533	118697355	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_118691613_118691980_118692069_118694435_118694527_118697181
H1_mix_00068321	chr4	+	484	1	ISM	ENSG00000172403.11	ENST00000448416.6	4298	3	169420	2501	30926	810	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAGGCGTGAGCCACCAC	NA	False	NA	NA	False	NA	NA	NA	119058260	119058744	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_119058300_119058700
H1_mix_00068322	chr4	+	1406	10	FSM	ENSG00000245958.7	ENST00000689183.1	1492	10	78	8	8	-8	multi-exon	FALSE	canonical	3	21	junction_6	55.0254710941742	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTGTATATATATATATA	32	True	NA	49	True	AATAAA	-14	NA	119454871	119499966	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_119455134_119460182_119460243_119460730_119460828_119461716_119461852_119462895_119462980_119488644_119488718_119493332_119493438_119494432_119494524_119497810_119497904_119499560
H1_mix_00068325	chr4	+	643	2	Intergenic	novelGene_1098	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	33	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAACCTCGTATCTCTGTG	-1	True	NA	NA	False	NA	NA	NA	119994011	119994784	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_119994264_119994393
H1_mix_00068332	chr4	+	2852	5	ISM	ENSG00000138688.17	ENST00000688874.1	5413	9	6570	-45	-9	0	3prime_fragment	FALSE	canonical	3	72	junction_2	11.1803398874989	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTAGTAGTTTTTCAAT	NA	False	NA	27	True	AATAAA	-19	NA	122352383	122362752	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_122354018_122355795_122355991_122356620_122356756_122359556_122359723_122362030
H1_mix_00068333	chr4	+	6667	4	NNC	ENSG00000138685.17	novel	6652	3	NA	NA	0	17260	intron_retention	FALSE	non_canonical	0	0	junction_3	322.949256419987	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACTCTGCACCTTTCCA	-1	True	NA	NA	False	NA	NA	NA	122826830	122915496	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_122827353_122876320_122876425_122892210_122898223_122915467
H1_mix_00068334	chr4	+	3029	1	ISM	ENSG00000196159.14	ENST00000674496.2	12001	17	174986	0	43793	0	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTATTCATAGTGTAAT	3438	False	NA	NA	False	ATTAAA	-17	NA	125489903	125492932	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_125489900_125492900
H1_mix_00068335	chr4	+	3231	16	NIC	ENSG00000164066.13	novel	483	4	NA	NA	11	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	11.9156293254793	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCAATTTGTTGTTGTTT	325	False	NA	26	True	AATATA	-23	NA	127623281	127716774	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_127623492_127643520_127644057_127656635_127656722_127663380_127663585_127669035_127669155_127674123_127674214_127684408_127684487_127687677_127687868_127700009_127700064_127704227_127704291_127705590_127705813_127706486_127706970_127708570_127708669_127710912_127711103_127713935_127714094_127716324
H1_mix_00068336	chr4	+	10522	19	FSM	ENSG00000164070.12	ENST00000296464.9	10608	19	0	86	0	-86	multi-exon	FALSE	canonical	2	8	junction_14	2.96741563579414	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGTTCATTTTTGGATG	16	True	NA	NA	False	AGTAAA	-33	NA	127782321	127840647	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_127782658_127794076_127794135_127795767_127795909_127798586_127798710_127801137_127801238_127801784_127801919_127803628_127803874_127804010_127804088_127805072_127805225_127805686_127805794_127807995_127808130_127811436_127811637_127818324_127818421_127820427_127820566_127822768_127822895_127823516_127823625_127827304_127827425_127830637_127830800_127832682
H1_mix_00068339	chr4	+	3551	16	NIC	ENSG00000142731.11	novel	3838	16	NA	NA	-2	4	combination_of_known_junctions	FALSE	canonical	3	32	junction_5	43.9703940800575	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATCTTTTGATTCATTT	13	True	NA	3	True	AATAAA	-16	NA	127880924	127899071	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_127881165_127881830_127881927_127883261_127883358_127883438_127883554_127885707_127886627_127887395_127887497_127889865_127890237_127891091_127891197_127891578_127891682_127892364_127892515_127893284_127893419_127893512_127893605_127893733_127893882_127894952_127895094_127896800_127896908_127898438
H1_mix_00068342	chr4	+	5321	15	NNC	ENSG00000164074.16	novel	5753	13	NA	NA	13	-217	at_least_one_novel_splicesite	FALSE	non_canonical	2	3	junction_8	29.8520159644681	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTAATTAGAAAAAGGTTC	22	True	NA	NA	False	NA	NA	NA	127965486	128039494	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_127965607_127982938_127983048_127984338_127984424_127989720_127989822_128001715_128001761_128008919_128008999_128009106_128009192_128009548_128009622_128011682_128011701_128017362_128017502_128020079_128020170_128021136_128021239_128028474_128028854_128030509_128030673_128035761
H1_mix_00068345	chr4	+	4275	19	NNC	ENSG00000138709.19	novel	1593	8	NA	NA	-472	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_11	66.9299431043432	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTTTTGAATTGATTT	2	True	NA	NA	False	AATAAA	-11	NA	128060813	128211130	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_128061226_128074459_128074519_128074933_128074994_128077787_128077963_128082164_128082306_128091000_128091145_128091346_128091513_128098185_128098331_128107138_128107314_128114569_128114743_128121825_128122189_128162193_128162318_128178430_128178643_128179405_128179513_128199438_128199600_128200520_128200666_128206427_128206538_128207255_128207384_128209855
H1_mix_00068346	chr4	+	2868	9	NIC	ENSG00000138709.19	novel	2563	10	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_4	58.7323111668526	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTTGTACATTTTTGTG	-10	True	NA	12	True	AATAAA	-19	NA	128061294	128108901	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_128062220_128074459_128074519_128074933_128074994_128077787_128077963_128091000_128091145_128091346_128091513_128098185_128098331_128107138_128107314_128107882
H1_mix_00068347	chr4	+	1977	11	ISM	ENSG00000138709.19	ENST00000649983.1	4606	20	490	88783	310	-4	5prime_fragment	FALSE	canonical	3	39	junction_1	47.3633824805619	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGGAATCGTTTTATTT	471	False	NA	3	True	AATATA	-15	NA	128062003	128122348	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_128062220_128074459_128074519_128074933_128074994_128077787_128077963_128082164_128082306_128091000_128091145_128091346_128091513_128098185_128098331_128107138_128107314_128114569_128114743_128121825
H1_mix_00068349	chr4	+	551	5	FSM	ENSG00000077684.16	ENST00000511925.5	529	5	-22	0	0	0	multi-exon	FALSE	canonical	2	27	junction_3	316.815798217197	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATCATGCCATAGAGACT	-12	True	NA	NA	False	NA	NA	NA	128811269	128852128	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_128811397_128831732_128831811_128842952_128843039_128848979_128849168_128852056
H1_mix_00068350	chr4	+	3496	9	ISM	ENSG00000077684.16	ENST00000610919.4	5644	11	16	11143	-2	0	5prime_fragment	FALSE	canonical	3	246	junction_1	171.491936763802	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGGCATTACTTACA	4	True	NA	18	True	AATAAA	-19	NA	128811285	128864081	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_128811397_128831732_128831811_128842952_128843039_128846374_128846533_128848979_128849168_128852056_128852269_128855629_128855798_128857337_128857455_128861703
H1_mix_00068351	chr4	+	396	4	FSM	ENSG00000151470.13	ENST00000508673.5	396	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	23.6220236220354	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTGGAGTTATTTTCCA	-12	True	NA	NA	False	NA	NA	NA	129096128	129109536	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_129096210_129102601_129102792_129106586_129106648_129109472
H1_mix_00068352	chr4	+	4595	1	FSM	ENSG00000138650.9	ENST00000618019.1	4574	1	-21	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGCTTATTGAGCGTG	1	True	NA	21	True	AATAAA	-30	NA	133149293	133153888	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_133149300_133153900
H1_mix_00068353	chr4	+	918	1	FSM	ENSG00000248795.1	ENST00000502915.1	1238	1	392	-72	392	72	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCGTCTCCAGGACCAC	410	False	NA	NA	False	NA	NA	NA	138561095	138562013	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_138561100_138562000
H1_mix_00068354	chr4	+	312	1	FSM	ENSG00000276396.1	ENST00000615106.1	292	1	-235	215	-235	-215	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTCACTACGCCAATC	NA	False	NA	NA	False	NA	NA	NA	139154917	139155229	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_139154900_139155200
H1_mix_00068357	chr4	+	412	1	FSM	ENSG00000273472.1	ENST00000609937.1	1394	1	-113	1095	-113	-1095	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCCCGACGCCCATCCCA	185	False	NA	NA	False	NA	NA	NA	140756414	140756826	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_140756400_140756800
H1_mix_00068359	chr4	+	1988	8	FSM	ENSG00000164136.17	ENST00000296545.11	2472	8	265	219	-80	-217	multi-exon	FALSE	canonical	0	0	junction_2	1.59078981795143	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCCCAAATACAGGTATT	-14	True	NA	NA	False	NA	NA	NA	141636866	141733768	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_141637225_141656185_141656308_141719365_141719477_141720468_141720567_141721923_141722009_141727939_141727985_141729846_141729985_141732737
H1_mix_00068360	chr4	+	5434	8	ISM	ENSG00000109458.9	ENST00000262995.8	7981	11	101495	1269	0	-1266	3prime_fragment	FALSE	canonical	2	6	junction_4	12.9583319662269	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGTTTCAAGACCTTAAA	4681	False	NA	13	True	AATAAA	-14	NA	143438256	143473299	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_143438601_143439801_143439888_143440078_143440383_143457679_143457770_143459384_143459479_143460363_143460488_143466102_143466226_143469030
H1_mix_00068362	chr4	+	9937	13	FSM	ENSG00000164161.10	ENST00000296575.8	9937	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	11.7269277022302	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACATGTGCTATTTTAAA	-19	True	NA	NA	False	ATTAAA	-19	NA	144646155	144745271	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_144646955_144652604_144652798_144658789_144658947_144659636_144659839_144706530_144706683_144707086_144707261_144708167_144708312_144711949_144712072_144714224_144714349_144715299_144715431_144718874_144718957_144734740_144734890_144737763
H1_mix_00068364	chr4	+	3522	18	NIC	ENSG00000164163.11	novel	3887	18	NA	NA	-2	-364	combination_of_known_junctions	FALSE	canonical	3	96	junction_1	160.230176129718	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTATTTACTGATCCTGG	2	True	NA	14	True	AATAAA	-15	NA	145098308	145129160	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_145098420_145104388_145104516_145105604_145105691_145108014_145108113_145109131_145109250_145110102_145110241_145110374_145110445_145110967_145111065_145112238_145112329_145117292_145117415_145119931_145120154_145121173_145121234_145121332_145121392_145123020_145123132_145123214_145123358_145123477_145123601_145124989_145125102_145127525
H1_mix_00068366	chr4	+	750	5	FSM	ENSG00000164163.11	ENST00000515678.5	750	5	0	0	0	0	multi-exon	FALSE	canonical	3	549	junction_1	78.2380182519982	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTAGAAATTCTAGACTTG	NA	False	NA	NA	False	AGTAAA	-37	NA	145121009	145123690	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_145121234_145121332_145121392_145123020_145123132_145123214_145123358_145123477
H1_mix_00068368	chr4	+	724	1	FSM	ENSG00000278943.1	ENST00000624774.1	1049	1	182	143	182	-143	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTAAGAAAAACCTGC	1078	False	NA	NA	False	NA	NA	NA	145377090	145377814	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_145377100_145377800
H1_mix_00068369	chr4	+	255	2	FSM	ENSG00000164167.12	ENST00000507449.1	371	2	0	116	0	-116	multi-exon	FALSE	canonical	3	1301	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATAATCCAGATCACCAA	7191	False	NA	NA	False	NA	NA	NA	146182922	146187435	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_146183016_146187273
H1_mix_00068370	chr4	+	638	3	FSM	ENSG00000164168.8	ENST00000506826.1	638	3	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_2	22.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGGGACATCCCAGGAAAA	NA	False	NA	NA	False	ATTAAA	-12	NA	147632546	147634178	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_147633003_147633764_147633937_147634168
H1_mix_00068371	chr4	+	864	5	FSM	ENSG00000071205.12	ENST00000510379.1	1559	5	0	695	0	-695	multi-exon	FALSE	canonical	3	28	junction_1	4.5	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAAAAAAGTCCTTGTGA	1	True	NA	NA	False	CATAAA	-2	NA	147732062	147857793	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_147732456_147822726_147822823_147822895_147822958_147847150_147847223_147857552
H1_mix_00068372	chr4	+	2543	1	FSM	ENSG00000181541.6	ENST00000317605.6	2543	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTGTTTGTGGATTGTT	9	True	NA	NA	False	AATAAA	-21	NA	150582150	150584693	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_150582200_150584700
H1_mix_00068373	chr4	+	860	6	FSM	ENSG00000145425.10	ENST00000512690.5	845	6	-15	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	7473.27948360022	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGCTTCTGAACATTC	13	True	NA	13	True	AATAAA	-16	NA	151099623	151104637	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_151099715_151100484_151100589_151100974_151101163_151102870_151103080_151104184_151104287_151104471
H1_mix_00068374	chr4	+	4575	9	FSM	ENSG00000164144.16	ENST00000451320.6	3424	9	5	-1156	3	1156	multi-exon	TRUE	canonical	3	90	junction_1	83.9455738857029	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTAGTCATTCAAGTAT	-29	True	NA	NA	False	AATAAA	-15	NA	152779941	152913513	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_152780092_152829624_152829727_152863605_152863715_152870752_152870849_152872451_152872565_152880962_152881185_152882722_152882881_152888132_152888308_152910063
H1_mix_00068378	chr4	+	8022	11	FSM	ENSG00000109654.16	ENST00000674718.1	8000	11	-22	0	-22	0	multi-exon	TRUE	canonical	3	92	junction_1	32.2521317124931	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTGTTTTCTCCATTTG	-23	True	NA	-2	True	NA	NA	NA	153204420	153339301	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_153204561_153270334_153270520_153275892_153276131_153292981_153293134_153294304_153294486_153295312_153296037_153315484_153315589_153315831_153316000_153322647_153324149_153328529_153328671_153334813
H1_mix_00068380	chr4	+	6952	12	FSM	ENSG00000109654.16	ENST00000674896.1	6889	12	-63	0	-55	0	multi-exon	FALSE	canonical	3	20	junction_1	49.1958474361269	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATTTGCAGAGTGAAT	NA	False	NA	8	True	AATAAA	-9	NA	153257283	153339311	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_153257608_153270337_153270520_153275892_153276131_153292981_153293134_153294304_153294486_153295312_153296037_153315484_153315589_153315831_153316000_153322647_153322817_153324077_153324149_153328529_153328671_153334813
H1_mix_00068383	chr4	+	5833	34	NNC	ENSG00000121210.16	novel	5006	35	NA	NA	-27	899	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_17	37.6921218747807	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTTGTCTTTATATT	NA	False	NA	6	True	AATAAA	-15	NA	153466318	153637610	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_153466522_153467210_153467282_153473844_153473889_153550072_153550142_153555786_153555911_153556965_153557083_153558257_153558369_153580825_153580904_153581406_153581561_153583189_153583249_153583563_153583673_153584834_153584932_153585457_153585612_153586208_153586380_153587741_153587812_153588889_153589008_153591052_153591195_153593798_153593872_153596257_153596386_153598589_153598733_153602151_153602339_153602541_153602728_153603302_153603453_153603801_153604431_153612251_153612401_153620755_153620881_153621682_153621850_153622900_153623084_153626146_153626226_153627604_153627688_153632717_153632839_153634191_153634281_153635431_153635572_153636300
H1_mix_00068385	chr4	+	601	4	FSM	ENSG00000137462.9	ENST00000646219.1	601	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.942809041582063	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAGAATCCTCCAATCAG	-21	True	NA	NA	False	NA	NA	NA	153684260	153702962	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_153684361_153687901_153688048_153702226_153702511_153702891
H1_mix_00068386	chr4	+	511	1	FSM	ENSG00000249013.1	ENST00000512179.1	511	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	250	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCCCCGAGACAGTGACA	NA	False	NA	NA	False	NA	NA	NA	156006477	156006988	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_156006500_156007000
H1_mix_00068387	chr4	+	2805	9	FSM	ENSG00000109738.11	ENST00000541722.5	2765	9	29	-69	4	69	multi-exon	FALSE	canonical	1	4	junction_8	3.278719262151	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTAATGGGATATAATC	-27	True	NA	NA	False	TTTAAA	-21	NA	157076153	157172159	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_157076298_157077995_157078147_157120555_157120663_157122329_157122398_157136468_157136699_157136803_157136887_157138808_157138950_157143806_157143960_157170431
H1_mix_00068390	chr4	+	370	4	FSM	ENSG00000164124.11	ENST00000512272.1	558	4	188	0	188	0	multi-exon	FALSE	canonical	3	24	junction_1	2.35702260395516	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCATGTTTAAGGAAATAAA	NA	False	NA	NA	False	NA	NA	NA	158237524	158244328	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_158237644_158240298_158240419_158241508_158241607_158244295
H1_mix_00068391	chr4	+	1079	2	FSM	ENSG00000171503.13	ENST00000510353.5	987	2	-92	0	18	0	multi-exon	FALSE	canonical	3	36	junction_1	0	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAAAAGAAGAAGA	92	False	NA	24	True	NA	NA	NA	158672223	158680101	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_158672491_158679289
H1_mix_00068392	chr4	+	219	1	FSM	ENSG00000271817.2	ENST00000607547.2	219	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCCATTTAGGTAAAGAAAA	-1	True	NA	NA	False	NA	NA	NA	158700690	158700909	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_158700700_158700900
H1_mix_00068393	chr4	+	7038	17	FSM	ENSG00000052795.13	ENST00000264433.11	7038	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	8.35141267990033	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTCCTGGTGCTGCATG	20	True	NA	10	True	AATAAA	-21	NA	158769025	158908050	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_158769320_158825915_158826043_158829078_158829226_158831860_158831962_158832066_158832139_158833527_158833629_158835404_158835477_158851320_158851451_158859056_158859259_158859577_158859667_158861341_158861489_158861606_158861777_158868101_158869429_158870312_158870470_158891445_158891647_158895749_158895866_158904465
H1_mix_00068395	chr4	+	724	7	FSM	ENSG00000052795.13	ENST00000504715.1	724	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	5.61990510002912	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTCTGGGAGAATTCAGG	6123	False	NA	NA	False	NA	NA	NA	158832079	158859647	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_158832139_158833527_158833629_158833800_158833891_158835404_158835477_158851320_158851451_158859056_158859259_158859577
H1_mix_00068396	chr4	+	8067	29	NIC	ENSG00000109756.10	novel	8101	30	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_6	15.2504181943329	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGCATGCTTTTTATTAT	-4	True	NA	NA	False	AATAAA	-39	NA	159103094	159360173	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_159104232_159186641_159186713_159193199_159193257_159210499_159210584_159238808_159238885_159241200_159241369_159304341_159304474_159314590_159314769_159322346_159322484_159323458_159323618_159329857_159330011_159330333_159330499_159331430_159331539_159331629_159331834_159331925_159332035_159332450_159332698_159338310_159338469_159339113_159339355_159341563_159341948_159342978_159343191_159343280_159343405_159344035_159344060_159345105_159345330_159346788_159346999_159350136_159350290_159352684_159352911_159353486_159354047_159355852_159356159_159358113
H1_mix_00068397	chr4	+	7149	29	NIC	ENSG00000109756.10	novel	8225	30	NA	NA	-95	-25	combination_of_known_junctions	FALSE	canonical	3	16	junction_21	17.6500491414012	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAAGCCTTGCCTATATT	3	True	NA	NA	False	AATAAA	-10	NA	159104082	159360144	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_159104232_159186641_159186713_159193199_159193257_159210499_159210584_159238808_159238885_159241200_159241369_159304341_159304474_159314590_159314769_159322346_159322484_159323458_159323618_159329857_159330011_159330333_159330499_159331430_159331539_159331629_159331834_159331925_159332035_159332450_159332698_159338310_159338469_159339113_159339355_159341563_159341948_159342978_159343191_159343280_159343405_159345105_159345330_159346788_159346999_159350136_159350290_159351058_159351182_159352684_159352911_159353486_159354047_159355852_159356159_159358113
H1_mix_00068398	chr4	+	1642	1	FSM	ENSG00000273449.1	ENST00000609356.1	927	1	-907	192	-907	-192	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTCTTTTCAAAATGCT	NA	False	NA	11	True	AGTAAA	-3	NA	163528863	163530505	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_163528900_163530500
H1_mix_00068399	chr4	+	349	1	FSM	ENSG00000177803.7	ENST00000436268.2	657	1	36	272	36	-272	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCATGTGGTAATGATCAA	NA	False	NA	NA	False	AATGAA	-30	NA	163932561	163932910	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_163932600_163932900
H1_mix_00068402	chr4	+	2982	14	NIC	ENSG00000109466.14	novel	3185	15	NA	NA	96	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	21.3635757040788	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTCACAGTGTTCTTG	34	True	NA	12	True	AATAAA	-14	NA	165207656	165323147	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_165207903_165219933_165220060_165238777_165238900_165263196_165263360_165294358_165294469_165297608_165297726_165299506_165299657_165305607_165305726_165310552_165310751_165311463_165311566_165313237_165313367_165314025_165314167_165317825_165317970_165322031
H1_mix_00068404	chr4	+	980	5	FSM	ENSG00000052802.13	ENST00000507013.5	973	5	-7	0	-7	0	multi-exon	FALSE	canonical	3	150	junction_1	661.166393580315	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAGAAACTATTGATGTCC	-45	True	NA	NA	False	NA	NA	NA	165327659	165340351	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_165327947_165333339_165333626_165337788_165337938_165338651_165338779_165340220
H1_mix_00068406	chr4	+	2553	10	NNC	ENSG00000109472.14	novel	2582	9	NA	NA	-182	41077	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	355.867363278671	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAAAATAGCCGAG	NA	False	NA	NA	False	AAAAAG	-9	NA	165378825	165539624	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_165379529_165464389_165464587_165467687_165467856_165482241_165482360_165484421_165484605_165487437_165487578_165493170_165493271_165495558_165495678_165497511_165498305_165539592
H1_mix_00068407	chr4	+	969	1	FSM	ENSG00000279384.1	ENST00000624842.1	748	1	-379	158	-379	-158	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGATTTCTGTGGTATTC	4914	False	NA	NA	False	NA	NA	NA	168843608	168844577	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_168843600_168844600
H1_mix_00068412	chr4	+	722	3	NNC	ENSG00000289508.1	novel	666	3	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTCC	-6	True	NA	22	True	AATAAA	-22	NA	169940255	169941684	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_169940379_169940520_169940661_169941225
H1_mix_00068413	chr4	+	701	3	FSM	ENSG00000289508.1	ENST00000691072.1	666	3	-35	0	-35	0	multi-exon	FALSE	canonical	2	4	junction_1	3.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTCC	34	False	NA	22	True	AATAAA	-22	NA	169940240	169941684	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_169940343_169940520_169940661_169941225
H1_mix_00068416	chr4	+	1567	6	FSM	ENSG00000109586.12	ENST00000512285.5	1567	6	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_5	184.217697304032	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCGTTATTAAAACTGTA	-1	True	NA	NA	False	NA	NA	NA	173168810	173298371	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_173168962_173247979_173248441_173292107_173292275_173295395_173295527_173295763_173295844_173297794
H1_mix_00068417	chr4	+	1658	10	FSM	ENSG00000109586.12	ENST00000505308.5	1658	10	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_4	186.127063992901	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAGCATGTTGTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	173292130	173322011	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_173292275_173295395_173295527_173295763_173295844_173297794_173297978_173302046_173302165_173303995_173304119_173313957_173314177_173317633_173317733_173318430_173318560_173321579
H1_mix_00068418	chr4	+	583	4	FSM	ENSG00000109586.12	ENST00000506317.1	583	4	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_1	67.8101926130742	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATATGGGGATATATCGG	NA	False	NA	NA	False	TATAAA	-39	NA	173298035	173314037	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_173298298_173302046_173302165_173303995_173304119_173313957
H1_mix_00068419	chr4	+	4511	12	FSM	ENSG00000164118.13	ENST00000503780.6	4298	12	-213	0	-32	0	multi-exon	FALSE	canonical	3	6	junction_1	27.6913328923577	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTTGTTTCATGCCATT	23	False	NA	14	True	AATAAA	-15	NA	174283697	174320328	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_174283944_174297965_174298063_174299071_174299211_174302038_174302187_174303702_174303850_174304246_174304370_174308688_174308860_174309849_174310057_174310782_174310859_174316165_174316291_174316529_174316568_174317334
H1_mix_00068423	chr4	+	10904	29	NIC	ENSG00000218336.9	novel	3394	15	NA	NA	140	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	44.0963694187897	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTTTTTATATTTTTT	8	False	NA	14	True	AATAAA	-16	NA	182144126	182803024	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_182144162_182323945_182324253_182346650_182346930_182600923_182601162_182628650_182628890_182653770_182653894_182673004_182673220_182679665_182679877_182680247_182680350_182680542_182680738_182681813_182682015_182688165_182688352_182714086_182714234_182728964_182729182_182730199_182730320_182730877_182731140_182736807_182737076_182738400_182738545_182743169_182743420_182744142_182744164_182751799_182752033_182753449_182753605_182754384_182755260_182773471_182773648_182774917_182775154_182789092_182789390_182792273_182793886_182796636_182796768_182799595
H1_mix_00068424	chr4	+	10913	28	NIC	ENSG00000218336.9	novel	3394	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	37.302897646691	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTTTTTATATTTTTT	14	True	NA	14	True	AATAAA	-16	NA	182144689	182803024	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_182144755_182323945_182324253_182346650_182346930_182600923_182601162_182628650_182628890_182653770_182653894_182673004_182673220_182679665_182679877_182680247_182680350_182680542_182680738_182681813_182682015_182688165_182688352_182714086_182714234_182728964_182729182_182730199_182730320_182730877_182731140_182736807_182737076_182738400_182738545_182743169_182743420_182751799_182752033_182753449_182753605_182754384_182755260_182773471_182773648_182774917_182775154_182789092_182789390_182792273_182793886_182796636_182796768_182799595
H1_mix_00068428	chr4	+	5442	30	NNC	ENSG00000168538.16	novel	4523	30	NA	NA	-6	-5	intron_retention	FALSE	canonical	3	32	junction_1	33.3321838882276	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAGTATGCTTGTCTGTC	7	True	NA	5	True	AATAAA	-11	NA	183659316	183713584	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_183660396_183663846_183664072_183666256_183666427_183667059_183667131_183668002_183668118_183674712_183674813_183675163_183675238_183677457_183677555_183679352_183679487_183680119_183680268_183682731_183682826_183683974_183684055_183684144_183684224_183684304_183684360_183684695_183684842_183685083_183685146_183685270_183685404_183686617_183686749_183691315_183691472_183692959_183693148_183693588_183693738_183693916_183694039_183694603_183694724_183697502_183697569_183697678_183697836_183701696_183701809_183704978_183705071_183706806_183706941_183708406_183708575_183712599
H1_mix_00068438	chr4	+	2111	14	NIC	ENSG00000109794.14	novel	2070	14	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_13	12.3254679328338	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTTGCACTGTAAAGAGA	-15	True	NA	7	True	AATAAA	-16	NA	186144856	186172142	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_186145113_186149172_186149284_186149592_186149705_186151902_186152046_186153644_186153771_186154467_186154639_186155999_186156191_186157564_186157720_186162844_186162949_186163423_186163634_186165343_186165465_186166967_186167097_186167180_186167263_186171942
H1_mix_00068441	chr4	+	1983	10	NNC	ENSG00000164344.16	novel	720	4	NA	NA	-9036	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	52.5230108301749	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCAAGTGTTTTCTTCTG	NA	False	NA	23	True	AATAAA	-18	NA	186241995	186258474	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_186242367_186250242_186250434_186251218_186251329_186251486_186251650_186251748_186251862_186252016_186252186_186254587_186254764_186255991_186256088_186257225_186257366_186258020
H1_mix_00068442	chr4	+	3232	9	ISM	ENSG00000164344.16	ENST00000264690.11	2258	15	21089	-7	-2436	7	3prime_fragment	FALSE	canonical	0	0	junction_1	51.393092921131	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTGTTTTCTTCTGGTTG	6313	False	NA	27	True	AATAAA	-22	NA	186248595	186258478	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_186250403_186251218_186251329_186251486_186251650_186251748_186251862_186252016_186252186_186254587_186254764_186255991_186256088_186257225_186257366_186258020
H1_mix_00068445	chr4	+	1081	5	FSM	ENSG00000249378.7	ENST00000655286.1	1198	5	29	88	0	-88	multi-exon	FALSE	canonical	3	10	junction_3	9.06917857360853	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAAAATGTGTATATATT	2	True	NA	NA	False	AAGAAA	-38	NA	188455580	188486332	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_188455675_188456663_188456763_188476697_188476757_188477637_188477913_188485778
H1_mix_00068448	chr4	-	650	4	NNC	ENSG00000186777.12	novel	2179	3	NA	NA	6	51616	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	43.8710230866191	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTTAAGATGTGGAAAAC	-8	True	NA	-6	True	AATAAA	-27	NA	305468	219058	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_219325_295437_295534_296028_296156_305307
H1_mix_00068449	chr4	-	647	4	NNC	ENSG00000186777.12	novel	2179	3	NA	NA	12	37659	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_1	39.6316371938716	469	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTACATCAGAATTTATT	-2	True	NA	-10	True	AATAAA	-10	NA	305462	233015	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_233285_295437_295534_296028_296156_305307
H1_mix_00068450	chr4	-	1631	1	FSM	ENSG00000251188.1	ENST00000511111.1	550	1	-909	-172	-909	172	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCTGGCCAACATGGTGA	NA	False	NA	NA	False	NA	NA	NA	270440	268809	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_268800_270400
H1_mix_00068451	chr4	-	717	1	FSM	ENSG00000248564.1	ENST00000508039.1	487	1	-93	-137	-93	137	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTTAGCTACCAATCATC	NA	False	NA	NA	False	NA	NA	NA	338676	337959	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_338000_338700
H1_mix_00068452	chr4	-	2509	3	NIC	ENSG00000182903.16	novel	1679	5	NA	NA	36449	1083	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	14	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGGCGGGGGTTGCAGTG	NA	False	NA	NA	False	NA	NA	NA	437602	424731	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_426974_435769_435880_437445
H1_mix_00068453	chr4	-	1503	3	FSM	ENSG00000251595.7	ENST00000507854.1	1503	3	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_1	138	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATTGATATAACAGTTC	87	False	NA	NA	False	NA	NA	NA	474051	425814	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_427120_472574_472702_473980
H1_mix_00068454	chr4	-	654	3	FSM	ENSG00000182903.16	ENST00000505900.1	664	3	10	0	10	0	multi-exon	FALSE	canonical	3	222	junction_1	29.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATTCATGCTGGAGAGAA	-19	True	NA	NA	False	CATAAA	-1	NA	474157	444082	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_444433_472574_472702_473980
H1_mix_00068455	chr4	-	329	5	NNC	ENSG00000169020.10	novel	303	4	NA	NA	9	56015	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4832.3832823463	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAGAATTTGAGGAGCCA	2	True	NA	NA	False	ACTAAA	-42	NA	674267	616420	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_616458_672437_672520_673302_673402_673911_673967_674211
H1_mix_00068456	chr4	-	496	3	FSM	ENSG00000169020.10	ENST00000506525.5	496	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	5806	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCGGCTCCTCATTTGC	8144	False	NA	-14	True	AATAAA	-19	NA	673821	672437	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_672520_673302_673402_673506
H1_mix_00068459	chr4	-	1833	10	FSM	ENSG00000169026.13	ENST00000322224.9	1833	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_8	14.7204401437148	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCCCCGGGTGTGGTTTC	0	True	NA	-6	True	NA	NA	NA	689151	681828	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_682377_682780_682891_683209_683368_683608_683762_684482_684600_684718_684857_685834_685912_686088_686303_686531_686691_688992
H1_mix_00068460	chr4	-	1556	8	FSM	ENSG00000169026.13	ENST00000515118.5	1556	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	12.9488790784282	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGGAGCGAATTACAAGCGC	6	True	NA	-35	True	NA	NA	NA	689191	681857	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_682377_682780_682891_683209_683368_683608_683762_684482_684603_684718_684857_686531_686691_688992
H1_mix_00068461	chr4	-	2797	1	FSM	ENSG00000272588.1	ENST00000607877.1	719	1	-961	-1117	-961	1117	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACAATTCTGAAGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	758701	755904	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_755900_758700
H1_mix_00068462	chr4	-	504	2	Intergenic	novelGene_1001	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	52	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGTTGACACACCTATGG	NA	False	NA	NA	False	NA	NA	NA	771371	770549	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_-_770931_771248
H1_mix_00068465	chr4	-	1413	7	NIC	ENSG00000178950.18	novel	4461	28	NA	NA	29	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_3	121.895333061698	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTGTCTCCAGTGTGG	5590	False	NA	-3	True	ATTAAA	-15	NA	867133	849276	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_849775_849891_850069_850935_851085_859605_859723_865121_865245_866363_866535_866955
H1_mix_00068467	chr4	-	4301	28	NIC	ENSG00000178950.18	novel	4461	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_7	54.9983164725504	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTGTACAGAATTAAACTA	171	False	NA	-34	True	NA	NA	NA	932220	849307	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_849775_849891_850069_850935_851085_851749_851975_859605_859723_865121_865245_866363_866502_866955_867433_868538_868686_870710_870905_876529_876610_877089_877208_877614_877810_881906_882041_882696_882820_883314_883464_884036_884087_888846_888971_890531_890623_893376_893490_893873_894010_896459_896550_898032_898159_904636_904780_911672_911788_912734_912795_913606_913669_932042
H1_mix_00068469	chr4	-	4360	23	NNC	ENSG00000145214.14	novel	4649	23	NA	NA	42	0	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_10	17.7712740628854	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTCTTCCTCATCTTTG	284	False	NA	-2	True	AATACA	-21	NA	973280	958886	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_960722_961048_961202_961466_961579_961687_961835_961981_962083_962434_962614_962771_962921_963138_963291_965175_965292_965490_965530_966150_966302_966465_966528_966747_966803_966963_967055_967128_967362_967548_967650_967727_967803_967879_968028_968281_968408_968478_968565_968810_968911_970992_971073_973211
H1_mix_00068470	chr4	-	818	9	FSM	ENSG00000145214.14	ENST00000502309.1	818	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	30.6530483802182	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGTGAGTCCAGCAGGACC	6389	False	NA	NA	False	NA	NA	NA	967175	963141	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_963291_964072_964094_965175_965292_965490_965530_966063_966302_966465_966528_966747_966803_966963_967055_967128
H1_mix_00068471	chr4	-	473	5	FSM	ENSG00000178222.13	ENST00000503206.5	470	5	0	-3	0	-1	multi-exon	FALSE	canonical	1	2	junction_4	5.44862367942584	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACGAGCATACATGTGATA	NA	False	NA	-5	True	AATAAA	-19	NA	1081603	1056250	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_1056504_1058320_1058394_1073598_1073663_1079642_1079689_1081566
H1_mix_00068472	chr4	-	804	8	FSM	ENSG00000178222.13	ENST00000508428.5	804	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	5.04267502706365	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTGAGTGTTTTCAATT	34	False	NA	NA	False	AAAAAG	-33	NA	1113515	1072850	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_1073141_1073598_1073663_1079642_1079689_1081566_1081620_1085895_1085955_1090781_1090839_1096764_1096840_1113355
H1_mix_00068474	chr4	-	1928	6	FSM	ENSG00000159674.12	ENST00000290902.10	1579	6	-246	-103	16	103	multi-exon	FALSE	canonical	3	13	junction_4	1.85472369909914	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGGCCATGAGGCACGTG	683	False	NA	84	True	NA	NA	NA	1172829	1166828	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_1167657_1170401_1170577_1170998_1171191_1171262_1171487_1171851_1172075_1172543
H1_mix_00068477	chr4	-	2911	10	NNC	ENSG00000159692.16	novel	2488	10	NA	NA	-367	1	at_least_one_novel_splicesite	FALSE	canonical	3	123	junction_9	360.817282168012	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGTGCCCAGCATCTATT	7135	False	NA	-18	True	AATAAA	-16	NA	1242290	1211446	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_1212424_1212912_1213031_1213477_1213606_1214342_1214474_1215990_1216206_1225359_1225567_1228198_1228344_1238182_1238338_1241324_1241520_1241650
H1_mix_00068483	chr4	-	2802	5	FSM	ENSG00000174137.14	ENST00000308132.11	2848	5	52	-6	52	6	multi-exon	FALSE	canonical	3	7	junction_4	4.76313972081441	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTTTGAAATTTTCTT	40	False	NA	NA	False	AATAAA	-44	NA	1684261	1639880	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_1641608_1654977_1655724_1657407_1657469_1668666_1668906_1684232
H1_mix_00068484	chr4	-	594	1	FSM	ENSG00000207009.1	ENST00000384282.1	110	1	-510	26	-510	-26	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTACTGCACTTGACTAG	262	False	NA	NA	False	NA	NA	NA	1684039	1683445	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_1683400_1684000
H1_mix_00068485	chr4	-	987	7	FSM	ENSG00000163950.13	ENST00000488267.5	987	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	169.073619730841	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAACATTAATTTTATGT	0	True	NA	NA	False	NA	NA	NA	1712317	1693446	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_1693714_1694773_1694841_1696201_1696352_1699563_1699702_1700010_1700071_1711873_1711991_1712129
H1_mix_00068486	chr4	-	4649	2	ISM	ENSG00000168936.11	ENST00000303277.6	2678	3	35	0	0	0	intron_retention	FALSE	canonical	3	30	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACTGTGTTTTGTGTTGC	12	True	NA	-3	True	AATAAA	-17	NA	1721323	1715951	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_1717429_1718151
H1_mix_00068487	chr4	-	5434	14	NNC	ENSG00000168924.15	novel	5371	14	NA	NA	-62	4	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_5	54.0073411621817	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAGTAATAATATTTCTG	17	False	NA	-1	True	ATTAAA	-28	NA	1856218	1811474	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_1814574_1815663_1815803_1816726_1816915_1819337_1819473_1822180_1822310_1822987_1823132_1823643_1823776_1825563_1825684_1832743_1832948_1834844_1834983_1836428_1836573_1841346_1841798_1849148_1849210_1855868
H1_mix_00068489	chr4	-	1713	7	FSM	ENSG00000185049.16	ENST00000467661.5	1707	7	0	-6	0	0	multi-exon	FALSE	canonical	3	381	junction_3	22.4400435729424	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTGTGTTTGGGGCCAG	NA	False	NA	-6	True	ATTAAA	-27	NA	1986560	1982716	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_1983504_1983595_1983696_1983847_1984114_1984807_1984920_1985775_1985865_1986113_1986184_1986271
H1_mix_00068491	chr4	-	447	3	FSM	ENSG00000130997.16	ENST00000510344.1	468	3	0	21	0	-21	multi-exon	FALSE	canonical	2	8	junction_1	1.5	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATCTTCCTTTTCAGATT	NA	False	NA	NA	False	AAAAAG	-12	NA	2159211	2156517	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_2156854_2157857_2157912_2159154
H1_mix_00068492	chr4	-	5431	6	NIC	ENSG00000214367.9	novel	4600	19	NA	NA	0	14379	intron_retention	FALSE	canonical	2	8	junction_1	61.6266176258279	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTTGAAGACAGGAAGACT	4	True	NA	NA	False	GATAAA	-27	NA	2242121	2213084	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_2213127_2229098_2232161_2236227_2236457_2238603_2239044_2240037_2241094_2241519
H1_mix_00068494	chr4	-	1789	14	NNC	ENSG00000109736.15	novel	1717	13	NA	NA	-31	50097	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	216.225090914141	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAGAAATATCTTGT	7573	False	NA	NA	False	NA	NA	NA	2934865	2880463	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_2880494_2930564_2930954_2931060_2931151_2931226_2931275_2931374_2931466_2931554_2931664_2931824_2931937_2932044_2932154_2932350_2932513_2932599_2932759_2933105_2933210_2933566_2933664_2933752_2933945_2934768
H1_mix_00068496	chr4	-	1605	13	FSM	ENSG00000109736.15	ENST00000503596.5	1589	13	0	-16	0	0	multi-exon	FALSE	canonical	3	61	junction_8	210.458362205502	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAAGTGCCTTTCGCCAT	6	True	NA	-10	True	AATAAA	-17	NA	2934816	2930566	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_2930954_2931060_2931151_2931226_2931275_2931374_2931466_2931554_2931664_2931824_2931937_2932044_2932154_2932350_2932410_2932599_2932759_2933105_2933210_2933566_2933664_2933752_2933945_2934768
H1_mix_00068501	chr4	-	6563	1	Genic_Genomic	ENSG00000284727.1	novel	NA	NA	NA	NA	58717	5993	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTTGTACTCTGTCCT	NA	False	NA	-2	True	TTTAAA	-6	NA	4048780	4042217	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr4_-_4042200_4048800
H1_mix_00068502	chr4	-	277	1	FSM	ENSG00000243894.1	ENST00000485355.1	781	1	181	323	181	-323	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTATGATCAGCACCAACA	NA	False	NA	NA	False	ACTAAA	-28	NA	4077310	4077033	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_4077000_4077300
H1_mix_00068503	chr4	-	1617	11	NNC	ENSG00000145220.14	novel	1554	10	NA	NA	-42	15185	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	110.999279276939	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCGTCTCTACTAAAAATA	NA	False	NA	NA	False	NA	NA	NA	4290196	4252515	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_4252541_4267704_4268024_4268529_4268616_4273582_4273670_4274366_4274770_4279446_4279531_4279641_4279750_4281782_4281898_4283620_4283796_4286518_4286573_4290035
H1_mix_00068504	chr4	-	1183	3	FSM	ENSG00000168818.10	ENST00000515687.5	1183	3	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	1.5	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAACAGGCAGGGGGTGT	NA	False	NA	NA	False	GGGGCT	-33	NA	4423823	4419333	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_4420130_4420863_4420945_4423517
H1_mix_00068506	chr4	-	895	2	FSM	ENSG00000168818.10	ENST00000510296.1	895	2	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGAGCACGTGGGAAGAG	NA	False	NA	NA	False	NA	NA	NA	4423688	4420220	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_4420945_4423517
H1_mix_00068509	chr4	-	2734	4	ISM	ENSG00000087008.16	ENST00000413009.6	2374	17	57725	-596	-8831	166	3prime_fragment	FALSE	canonical	3	63	junction_2	136.894931324071	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCAGTGTTAGGTTCCCG	NA	False	NA	NA	False	NA	NA	NA	8382998	8366115	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_8367081_8370907_8370995_8374977_8375153_8381491
H1_mix_00068510	chr4	-	2872	18	FSM	ENSG00000087008.16	ENST00000356406.10	2872	18	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_17	81.865363348995	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTATGATCTGTTTGTCC	2	True	NA	-5	True	NA	NA	NA	8440723	8366281	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_8367081_8370907_8370995_8373560_8373629_8374977_8375153_8381491_8381608_8389172_8389287_8389611_8389735_8392332_8392454_8394619_8394743_8396936_8397120_8399555_8399653_8405954_8406044_8410211_8410356_8414291_8414382_8414853_8414929_8415765_8416000_8416377_8416536_8440647
H1_mix_00068513	chr4	-	1050	2	ISM	ENSG00000288075.1	ENST00000659603.1	1440	3	87085	69	-67	-69	3prime_fragment	FALSE	canonical	3	33	junction_1	0	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGGAACTCAGAGACCGG	NA	False	NA	-21	True	AATAAA	-20	NA	9064333	9034587	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_9035546_9064241
H1_mix_00068514	chr4	-	995	3	NNC	ENSG00000288075.1	novel	1440	3	NA	NA	-23	-14679	intron_retention	FALSE	canonical	3	20	junction_2	0.5	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGGAGTGAAGCTGCAGA	92	False	NA	NA	False	NA	NA	NA	9152298	9144622	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_9144867_9151094_9151440_9151892
H1_mix_00068516	chr4	-	10575	27	NNC	ENSG00000038219.13	novel	10567	26	NA	NA	12	33577	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	38.7921177865667	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAAGTGTGTTCTCGCCA	-17	True	NA	NA	False	NA	NA	NA	13627713	13535160	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_13535187_13568743_13570129_13576837_13576992_13577402_13577488_13577581_13577632_13579927_13579974_13581019_13581055_13581131_13581208_13582236_13582311_13582651_13582737_13586395_13586476_13587698_13587772_13588721_13588793_13590385_13590447_13591922_13591967_13595859_13595945_13597103_13597169_13598945_13605085_13607116_13607190_13608529_13608669_13609294_13609407_13610933_13611101_13613511_13613662_13614195_13614811_13615311_13615503_13619942_13620068_13627344
H1_mix_00068522	chr4	-	3756	27	NIC	ENSG00000007062.12	novel	4349	27	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	3	14	junction_4	60.709951612994	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTCTGTATGTTACTTCC	8244	False	NA	-4	True	AATAAA	-17	NA	16075902	15968228	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_15969369_15971042_15971083_15979394_15979464_15979880_15979905_15980276_15980302_15980421_15980538_15984262_15984356_15985759_15985829_15985956_15986038_15987662_15987717_15989731_15989825_15991221_15991294_15992247_15992392_15993986_15994072_15998384_15998489_16000495_16000620_16006537_16006691_16008948_16009109_16013274_16013339_16016165_16016241_16018322_16018541_16023325_16023416_16024294_16024359_16025191_16025313_16033303_16033510_16038945_16039002_16075686
H1_mix_00068524	chr4	-	3900	25	NIC	ENSG00000007062.12	novel	4021	28	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	6	junction_2	51.5180490216778	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTCTGTATGTTACTTCC	-8	True	NA	-4	True	AATAAA	-17	NA	16084023	15968228	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_15969369_15971042_15971083_15980421_15980538_15984262_15984356_15985759_15985829_15985956_15986038_15987662_15987717_15989731_15989825_15991221_15991294_15992247_15992392_15993986_15994072_15998384_15998489_16000495_16000620_16006537_16006691_16008948_16009109_16013274_16013339_16016165_16016241_16018322_16018541_16023325_16023416_16024294_16024359_16025191_16025313_16033303_16033510_16038945_16039002_16075686_16076119_16083977
H1_mix_00068525	chr4	-	4020	28	FSM	ENSG00000007062.12	ENST00000447510.7	4021	28	0	1	0	-1	multi-exon	FALSE	canonical	3	6	junction_25	61.5833159313251	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTCTGTATGTTACTTCC	-8	True	NA	-4	True	AATAAA	-17	NA	16084023	15968228	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_15969369_15971042_15971083_15979394_15979464_15979880_15979905_15980421_15980538_15984262_15984356_15985759_15985829_15985956_15986038_15987662_15987717_15989731_15989825_15991221_15991294_15992247_15992392_15993986_15994072_15998384_15998489_16000495_16000620_16006537_16006691_16008948_16009109_16013274_16013339_16016165_16016241_16018322_16018541_16023325_16023416_16024294_16024359_16025191_16025313_16033303_16033510_16035734_16035762_16038945_16039002_16075686_16076119_16083977
H1_mix_00068527	chr4	-	4141	13	FSM	ENSG00000169762.17	ENST00000505603.5	1634	13	-14	-2493	-14	-263	multi-exon	FALSE	canonical	1	3	junction_12	16.6756225937411	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATTTACAAAATAATGTAA	417	False	NA	NA	False	AATATA	-37	NA	16226485	16160767	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_16163538_16166632_16166794_16170652_16170730_16174203_16174273_16174669_16174730_16176118_16176229_16179576_16179658_16186534_16186605_16186780_16186879_16188219_16188356_16191360_16191524_16202461_16202581_16226258
H1_mix_00068528	chr4	-	1527	1	Genic_Genomic	ENSG00000169762.17	novel	NA	NA	NA	NA	-1282	-24627	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCAAGCTCCTTCTTGCC	NA	False	NA	NA	False	NA	NA	NA	16228692	16227165	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr4_-_16227200_16228700
H1_mix_00068529	chr4	-	2530	9	NIC	ENSG00000169744.13	novel	2476	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	10	junction_2	57.7862440378331	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAAGTGAATCTGGCTA	-4	True	NA	-16	True	AATAAA	-15	NA	16898660	16501543	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_16502874_16505839_16505983_16508540_16508684_16511980_16512105_16585921_16586006_16588709_16588833_16595702_16595876_16759157_16759261_16898353
H1_mix_00068531	chr4	-	343	3	Intergenic	novelGene_1011	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_2	476.5	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGGCCATTTACACTTCTT	NA	False	NA	NA	False	NA	NA	NA	16998246	16974993	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_-_16975080_16975110_16975318_16998196
H1_mix_00068532	chr4	-	1377	6	FSM	ENSG00000151552.12	ENST00000507439.5	1374	6	0	-3	0	0	multi-exon	FALSE	canonical	3	16	junction_2	196.33481606684	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGGCCTGATTCTGCCTT	-6	True	NA	-3	True	AATAAA	-17	NA	17512069	17486394	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_17487237_17490661_17490746_17501718_17501860_17504378_17504476_17509270_17509364_17511949
H1_mix_00068536	chr4	-	1897	2	FSM	ENSG00000152990.14	ENST00000506155.1	671	2	-36	-1190	-36	1190	multi-exon	FALSE	canonical	3	309	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGAAGTAAACCTGAATTA	5124	False	NA	NA	False	NA	NA	NA	22414122	22412015	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_22413391_22413600
H1_mix_00068537	chr4	-	699	1	FSM	ENSG00000237350.1	ENST00000421246.1	576	1	-30	-93	-30	93	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTCCAATAATGACAAATG	43	False	NA	NA	False	ATTAAA	-14	NA	22727980	22727281	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_22727300_22728000
H1_mix_00068539	chr4	-	1146	2	NNC	ENSG00000289201.1	novel	1291	2	NA	NA	-210	-7	intron_retention	FALSE	canonical	3	38	junction_1	0	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGCCCCCACCGCTTG	NA	False	NA	-26	True	ATTAAA	-13	NA	24473161	24471474	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_24472465_24473005
H1_mix_00068540	chr4	-	1014	3	NNC	ENSG00000289201.1	novel	1299	2	NA	NA	-262	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	12.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCACCGCTTGTTGGTGA	NA	False	NA	-19	True	ATTAAA	-20	NA	24473213	24471467	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_24472184_24472374_24472465_24473005
H1_mix_00068541	chr4	-	3006	15	NNC	ENSG00000109606.13	novel	2998	14	NA	NA	0	2052	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	334.307142170374	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTATTCCCTAAGCATA	4	True	NA	NA	False	NA	NA	NA	24584537	24515388	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_24515417_24527477_24528042_24529600_24529771_24532863_24533055_24537050_24537174_24540107_24540300_24540839_24540949_24541872_24542023_24542939_24543027_24548854_24549023_24554724_24554944_24556250_24556411_24570653_24570848_24576242_24576679_24584322
H1_mix_00068542	chr4	-	763	1	FSM	ENSG00000207697.1	ENST00000384964.1	99	1	-572	-92	-572	92	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTGGACAGTCACTGTT	183	False	NA	NA	False	TTTAAA	-12	NA	24520862	24520099	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_24520100_24520900
H1_mix_00068546	chr4	-	3419	24	FSM	ENSG00000091490.11	ENST00000502949.5	3500	24	81	0	81	0	multi-exon	FALSE	canonical	2	2	junction_23	79.437412202733	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGTACCCAGATCAGGCA	6052	False	NA	34	True	TTTAAA	-13	NA	25863456	25748265	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_25748565_25757533_25757607_25757687_25757791_25758940_25759069_25765325_25765436_25767524_25767610_25767739_25767831_25776276_25776361_25779075_25779204_25782241_25782419_25784227_25784291_25788223_25788365_25790454_25790575_25802282_25802463_25804540_25804753_25818137_25818279_25819807_25819941_25821995_25822129_25830097_25830157_25832994_25833111_25833447_25833570_25835196_25835324_25847293_25847865_25863433
H1_mix_00068547	chr4	-	1326	5	FSM	ENSG00000091490.11	ENST00000510448.5	1326	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	161.048711575101	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTGCCAGGTATAGTCA	NA	False	NA	3	True	AATAAA	-34	NA	25765360	25755921	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_25756909_25757533_25757607_25757687_25757791_25758940_25759069_25765325
H1_mix_00068548	chr4	-	611	4	FSM	ENSG00000091490.11	ENST00000513364.1	611	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	165.029963609306	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAACTAAATTCATCATA	1	True	NA	NA	False	NA	NA	NA	25862988	25833062	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_25833111_25833447_25833570_25835196_25835324_25862674
H1_mix_00068550	chr4	-	297	1	FSM	ENSG00000251332.1	ENST00000505310.1	710	1	447	-34	447	34	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGAGGGGGCGGGGAAA	NA	False	NA	NA	False	AAAACA	-13	NA	37995756	37995459	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_37995500_37995800
H1_mix_00068551	chr4	-	4872	26	NNC	ENSG00000035928.17	novel	4886	25	NA	NA	0	42529	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	75.8878119331425	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGAAAATCTTGGCTCC	29	True	NA	NA	False	AAAAAG	-12	NA	39366335	39244926	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_39244954_39287456_39288845_39289847_39290040_39291638_39291853_39295613_39295760_39300020_39300139_39300259_39300415_39302277_39302377_39302499_39302596_39302736_39302875_39303059_39303152_39304813_39304929_39306591_39306705_39308635_39309033_39311444_39311550_39312751_39312932_39316914_39317023_39320382_39320670_39321286_39321375_39323339_39323418_39326562_39326641_39327523_39327757_39342344_39342468_39345400_39345477_39351347_39351477_39366238
H1_mix_00068553	chr4	-	4872	26	NNC	ENSG00000035928.17	novel	4886	25	NA	NA	0	3124	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	75.8878119331425	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTACTTACTTAGAA	29	True	NA	NA	False	NA	NA	NA	39366335	39284331	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_39284357_39287454_39288845_39289847_39290040_39291638_39291853_39295613_39295760_39300020_39300139_39300259_39300415_39302277_39302377_39302499_39302596_39302736_39302875_39303059_39303152_39304813_39304929_39306591_39306705_39308635_39309033_39311444_39311550_39312751_39312932_39316914_39317023_39320382_39320670_39321286_39321375_39323339_39323418_39326562_39326641_39327523_39327757_39342344_39342468_39345400_39345477_39351347_39351477_39366238
H1_mix_00068554	chr4	-	4778	24	NIC	ENSG00000035928.17	novel	4870	25	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	71.6054881676523	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGAGTCACGACCCTGT	3	True	NA	-6	True	AATAAA	-20	NA	39366361	39287454	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_39288845_39289847_39290040_39291638_39291853_39295613_39295760_39300020_39300139_39300259_39300415_39302277_39302377_39302499_39302596_39302736_39302875_39304813_39304929_39306591_39306702_39308635_39309033_39311444_39311550_39312751_39312932_39316914_39317023_39320382_39320670_39321286_39321375_39323339_39323418_39326562_39326641_39327523_39327757_39342344_39342468_39345400_39345477_39351347_39351477_39366238
H1_mix_00068562	chr4	-	4378	6	NNC	ENSG00000163683.12	novel	6252	5	NA	NA	0	559	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	209.63587479246	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGTGGGAAGAGAAGCAA	241	False	NA	17	True	AATAAA	-39	NA	39638845	39547276	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_39548943_39549855_39552159_39556427_39556571_39572414_39572464_39605070_39605181_39638738
H1_mix_00068563	chr4	-	680	4	FSM	ENSG00000163683.12	ENST00000507613.5	680	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	227.779620588751	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAACTGTGATTATAATTT	241	False	NA	NA	False	GGGGCT	-44	NA	39638845	39551838	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_39552159_39556427_39556571_39605070_39605181_39638738
H1_mix_00068564	chr4	-	490	1	Genic_Genomic	ENSG00000249019.2	novel	NA	NA	NA	NA	260	140	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGGGTACAGAGTTTCA	NA	False	NA	NA	False	NA	NA	NA	39714191	39713701	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr4_-_39713700_39714200
H1_mix_00068566	chr4	-	7199	34	NNC	ENSG00000121892.15	novel	7131	33	NA	NA	0	13927	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	96.317379787967	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATCAATCTTGCAGTACA	7	False	NA	NA	False	AAAAAG	-2	NA	39977956	39808935	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_39808962_39822865_39825489_39837855_39838209_39841947_39842057_39844655_39844802_39845817_39845881_39848850_39848971_39849519_39849653_39862218_39862334_39862868_39863074_39863335_39863460_39866860_39866998_39869393_39869463_39872985_39873145_39874288_39874413_39876992_39877154_39879727_39879834_39890248_39890365_39898388_39898529_39898776_39898826_39900425_39900508_39902346_39902461_39904039_39904192_39908394_39908541_39910243_39910339_39913610_39913727_39917047_39917189_39920318_39920400_39922621_39922749_39925835_39925934_39926774_39926862_39927960_39928165_39976439_39976618_39977456
H1_mix_00068567	chr4	-	7622	34	NNC	ENSG00000121892.15	novel	7131	33	NA	NA	-45	13927	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	117.744700554732	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATCAATCTTGCAGTACA	NA	False	NA	NA	False	AAAAAG	-2	NA	39978001	39808935	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_39808962_39822865_39825489_39837477_39838209_39841947_39842057_39844655_39844802_39845817_39845881_39848850_39848971_39849519_39849653_39862218_39862334_39862868_39863074_39863335_39863460_39866860_39866998_39869393_39869463_39872985_39873145_39874288_39874413_39876992_39877154_39879727_39879834_39890248_39890365_39898388_39898529_39898776_39898826_39900425_39900508_39902346_39902461_39904039_39904192_39908394_39908541_39910243_39910339_39913610_39913727_39917047_39917189_39920318_39920400_39922621_39922749_39925835_39925934_39926774_39926862_39927960_39928165_39976439_39976618_39977456
H1_mix_00068569	chr4	-	5092	7	NNC	ENSG00000163694.15	novel	5114	7	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	3	117	junction_3	97.1638078481672	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCAAGACCTTATTTTAAA	12	True	NA	-17	True	AATAAA	-17	NA	40629845	40423279	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_40426144_40432650_40432863_40436440_40436645_40437770_40438925_40466576_40466700_40544421_40544507_40629395
H1_mix_00068570	chr4	-	4890	8	NNC	ENSG00000163694.15	novel	5114	7	NA	NA	35	0	at_least_one_novel_splicesite	TRUE	non_canonical	3	117	junction_4	98.9271015878431	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCAAGACCTTATTTTAAA	0	True	NA	-17	True	AATAAA	-17	NA	40630751	40423279	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_40423673_40423713_40426144_40432650_40432863_40436440_40436645_40437770_40438925_40466576_40466700_40544421_40544507_40630462
H1_mix_00068573	chr4	-	4740	8	NNC	ENSG00000163697.17	novel	1274	8	NA	NA	0	10958	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	102.5216751597	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCCTATGGAATCTTGGT	-14	True	NA	NA	False	AAAAAG	-5	NA	40857155	40799068	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_40799104_40812308_40816260_40821870_40822051_40823643_40823760_40825886_40825971_40827131_40827220_40830462_40830578_40856984
H1_mix_00068574	chr4	-	6492	17	NIC	ENSG00000163697.17	novel	8899	18	NA	NA	0	-2284	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	101.039731510679	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATAAAACGTTCGGCTCA	-14	True	NA	NA	False	AATAAA	-7	NA	41214518	40812311	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_40816260_40821870_40822051_40823643_40823760_40825886_40825971_40827131_40827220_40830462_40830578_40890363_40890492_40893264_40893412_40934455_40934517_40934613_40934700_40935076_40935140_40944864_40945074_41013582_41014399_41033235_41033305_41100638_41100751_41142986_41143143_41214404
H1_mix_00068580	chr4	-	230	1	FSM	ENSG00000272862.1	ENST00000608029.1	497	1	-54	321	-54	-321	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTAGAAGAAAATGTTC	NA	False	NA	NA	False	NA	NA	NA	41989291	41989061	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_41989100_41989300
H1_mix_00068581	chr4	-	3757	2	NNC	ENSG00000188848.17	novel	8692	6	NA	NA	28938	9252	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGCCTATTTGTCATCA	NA	False	NA	NA	False	NA	NA	NA	42123717	42101600	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_42101765_42120124
H1_mix_00068582	chr4	-	7616	32	NNC	ENSG00000124406.16	novel	8209	36	NA	NA	4945	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_31	7.72417317236415	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGAAGTTTTGATTGCT	NA	False	NA	-3	True	AATAAA	-19	NA	42611133	42408372	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_42413014_42414626_42414719_42422806_42422900_42423616_42423706_42443564_42443673_42444577_42444635_42446582_42446645_42451980_42452060_42455296_42455420_42455524_42455600_42464689_42464801_42464892_42465077_42485495_42485669_42503449_42503515_42507015_42507155_42522159_42522300_42524762_42524848_42543916_42543987_42549012_42549063_42551197_42551281_42552504_42552611_42555967_42556041_42574618_42574708_42575621_42575700_42578259_42578388_42579812_42579979_42581620_42581733_42586348_42586477_42588259_42588330_42594288_42594363_42600477_42600519_42611101
H1_mix_00068583	chr4	-	2737	2	FSM	ENSG00000183783.7	ENST00000360029.4	2595	2	-142	0	-142	0	multi-exon	FALSE	canonical	1	5	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGATTTCTATTGACT	NA	False	NA	2	True	ATTAAA	-21	NA	44448951	44173902	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_44175251_44447562
H1_mix_00068585	chr4	-	1050	6	FSM	ENSG00000163281.12	ENST00000507534.5	1050	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	21.3766227454198	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGAGTGTCCACATCAGG	-3	True	NA	NA	False	TATAAA	-42	NA	44726523	44702787	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_44703143_44707751_44707927_44710952_44711138_44717112_44717296_44718308_44718411_44726473
H1_mix_00068586	chr4	-	579	1	FSM	ENSG00000249936.3	ENST00000511164.1	579	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTCAGCCCCTCGTTCT	204	False	NA	NA	False	NA	NA	NA	46724408	46723829	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_46723800_46724400
H1_mix_00068588	chr4	-	10865	54	NNC	ENSG00000075539.15	novel	11692	64	NA	NA	-251	211	at_least_one_novel_splicesite	TRUE	canonical	3	15	junction_22	12.9911654949999	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTACGCTTATAAGACAACA	NA	False	NA	NA	False	ACTAAA	-17	NA	48606097	48497145	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_48499681_48500029_48500221_48501622_48501734_48505546_48505616_48510058_48510158_48510834_48510985_48512480_48512689_48515027_48515276_48521047_48521216_48522900_48523105_48527476_48527654_48527970_48528046_48528174_48528337_48531155_48531354_48534544_48534686_48535656_48535828_48539970_48540069_48540352_48540961_48542026_48542122_48543806_48543998_48544782_48544905_48546066_48546269_48547583_48547770_48548689_48548794_48549472_48549624_48550591_48550705_48551493_48551579_48553214_48553384_48556977_48557119_48557452_48557713_48561467_48561637_48562888_48562989_48563947_48564103_48564932_48565044_48565530_48565692_48567247_48567421_48570826_48570919_48573185_48573244_48575116_48575242_48576029_48576223_48578972_48579242_48580864_48580952_48581419_48581606_48582496_48582735_48586620_48586729_48589744_48589878_48590658_48590831_48593929_48594017_48595589_48595699_48595896_48596001_48598828_48598874_48602019_48602122_48603289_48603389_48605740
H1_mix_00068589	chr4	-	11497	64	NNC	ENSG00000075539.15	novel	11692	64	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_39	11.9555108783695	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGTGTTGTATTTTAAC	13	True	NA	-12	True	AATAAA	-17	NA	48780267	48497566	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_48499681_48500029_48500221_48501622_48501734_48505546_48505616_48510058_48510158_48510834_48510985_48512480_48512689_48515027_48515276_48521047_48521216_48522900_48523105_48527476_48527654_48527970_48528046_48528174_48528337_48531155_48531354_48534544_48534686_48535656_48535828_48539970_48540069_48540352_48540961_48542026_48542122_48543806_48543998_48544782_48544905_48546066_48546272_48547583_48547770_48548689_48548794_48549472_48549624_48550591_48550705_48551493_48551579_48553214_48553384_48556977_48557119_48557452_48557713_48561467_48561637_48562888_48562989_48563947_48564103_48564932_48565044_48565530_48565692_48567247_48567421_48570826_48570919_48573185_48573244_48575116_48575242_48576029_48576223_48578972_48579242_48580864_48580952_48581419_48581606_48582496_48582735_48586620_48586729_48589744_48589878_48590658_48590831_48593929_48594017_48595589_48595699_48595896_48596001_48598828_48598874_48602019_48602122_48603289_48603389_48605740_48605834_48606437_48606607_48608986_48609068_48609743_48609824_48619273_48619371_48620638_48620779_48623125_48623180_48634290_48634491_48684672_48684796_48710518_48710699_48780077
H1_mix_00068592	chr4	-	773	8	NNC	ENSG00000145247.12	novel	1109	7	NA	NA	0	99172	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	785.67750563265	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAAGAAGCACCTGATCA	38	False	48906796	NA	False	AAAAAG	-2	NA	48906774	48785846	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_48785874_48885381_48885566_48892771_48892890_48894005_48894054_48897803_48897858_48899828_48899926_48904483_48904612_48906657
H1_mix_00068593	chr4	-	771	8	NNC	ENSG00000145247.12	novel	1109	7	NA	NA	0	99171	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	785.67750563265	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCAAAGAAGCACCTGATC	38	False	48906796	NA	False	AAAAAG	-1	NA	48906774	48785847	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_48785873_48885381_48885566_48892771_48892890_48894005_48894054_48897803_48897858_48899828_48899926_48904483_48904612_48906657
H1_mix_00068594	chr4	-	4262	6	NNC	ENSG00000163069.13	novel	4248	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	321.820198247406	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTGTTAATTTTTTAAG	5603	False	NA	-26	True	AATAAA	-15	NA	52033640	52020705	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_52024161_52027967_52028100_52028729_52028922_52029677_52029864_52031874_52031962_52033430
H1_mix_00068595	chr4	-	1554	6	NIC	ENSG00000163069.13	novel	4248	6	NA	NA	0	-2731	combination_of_known_junctions	FALSE	canonical	3	52	junction_4	307.793047354874	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATGGTTCCTTAGTTTT	5603	False	NA	NA	False	ATTAAA	-24	NA	52033640	52023436	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_52024161_52027967_52028100_52028729_52028922_52029677_52029864_52031851_52031962_52033430
H1_mix_00068596	chr4	-	2221	8	FSM	ENSG00000184178.17	ENST00000388940.8	2221	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	17.855428489135	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGTT	-23	True	NA	NA	False	NA	NA	NA	53366061	52873787	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_52874062_52885746_52885867_52920724_52920871_53145332_53145583_53273825_53274002_53313635_53313764_53352597_53352767_53365103
H1_mix_00068598	chr4	-	10470	23	FSM	ENSG00000134852.15	ENST00000513440.6	10470	23	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_22	9.73151988842663	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATTTCCCTTTCTTTTA	0	True	NA	0	True	ATTAAA	-21	NA	55546909	55427902	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_55435595_55438281_55438538_55442431_55442635_55443686_55443897_55444632_55444786_55448778_55448869_55449395_55449497_55450090_55450233_55453053_55453130_55453676_55453825_55455896_55456004_55456217_55456301_55458891_55459011_55459147_55459262_55463684_55463806_55470716_55470807_55475962_55476055_55478814_55478964_55479639_55479700_55482738_55482829_55489373_55489466_55509911_55510066_55546781
H1_mix_00068601	chr4	-	3179	12	FSM	ENSG00000157426.14	ENST00000451613.5	3182	12	0	3	0	0	multi-exon	FALSE	canonical	3	5	junction_1	16.1716004513166	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGAAACTTGTCTACACTTG	NA	False	NA	NA	False	ATTAAA	-25	NA	56387508	56338289	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_56338792_56349262_56350059_56351341_56351458_56353403_56353597_56354038_56354212_56354704_56354812_56355181_56355424_56371450_56371644_56378147_56378465_56382476_56382598_56384069_56384342_56387361
H1_mix_00068604	chr4	-	545	3	FSM	ENSG00000157426.14	ENST00000510012.1	1222	3	0	677	0	-12	multi-exon	FALSE	canonical	3	55	junction_1	5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTCAATTGAAACATTC	-10	True	NA	NA	False	NA	NA	NA	56387472	56382435	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_56382598_56384069_56384342_56387361
H1_mix_00068605	chr4	-	4043	3	FSM	ENSG00000128059.8	ENST00000425339.2	4043	3	5	-5	5	2	multi-exon	FALSE	canonical	3	544	junction_2	15	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCCTTTTTTTTTTT	NA	False	NA	-9	True	GATAAA	-26	NA	56400911	56393359	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_56395549_56396618_56396740_56399178
H1_mix_00068607	chr4	-	722	4	FSM	ENSG00000128040.12	ENST00000506738.6	722	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2.49443825784929	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTACTGTTCTCTGTTG	12	True	NA	1	True	AATAAA	-17	NA	56821701	56809860	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_56810185_56811684_56811795_56820535_56820580_56821457
H1_mix_00068609	chr4	-	7653	1	NIC	ENSG00000289308.1	novel	1948	3	NA	NA	14	2272	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCTGATAATTTTATTTA	6628	False	NA	NA	False	AATAAA	-16	NA	61769634	61761981	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_61762000_61769600
H1_mix_00068610	chr4	-	3743	2	NNC	ENSG00000289308.1	novel	703	2	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	6627	False	NA	-3	True	AATAAA	-18	NA	61769635	61764257	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_61767760_61769394
H1_mix_00068611	chr4	-	2968	2	FSM	ENSG00000289308.1	ENST00000693254.1	710	2	13	-2271	13	2271	multi-exon	FALSE	canonical	3	19	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTCTGATAATTTTATTT	6627	False	NA	NA	False	AATAAA	-15	NA	61769635	61761982	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_61764710_61769394
H1_mix_00068612	chr4	-	763	3	FSM	ENSG00000250075.7	ENST00000503987.1	763	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAGAGCACTTCTGCTAT	NA	False	NA	NA	False	NA	NA	NA	67421054	67418541	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_67418992_67419893_67420050_67420897
H1_mix_00068613	chr4	-	1641	12	NNC	ENSG00000145241.11	novel	2799	15	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_4	27.2533264328025	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTGTATTTGATAAACAT	NA	False	NA	-29	True	AATAAA	-22	NA	67514222	67472476	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_67472676_67474887_67474979_67489966_67490122_67492179_67492252_67492868_67492998_67493883_67493989_67495158_67495213_67505204_67505285_67506787_67506935_67508813_67509106_67512401_67512570_67514073
H1_mix_00068614	chr4	-	3277	19	NIC	ENSG00000145241.11	novel	6823	19	NA	NA	-51	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_4	21.7045964296238	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTGTATTTGATAAACAT	8	False	NA	-29	True	AATAAA	-22	NA	67545554	67472476	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_67472676_67474887_67474979_67489966_67490122_67492179_67492276_67492750_67492998_67493883_67493989_67495158_67495213_67505204_67505285_67506787_67506935_67508813_67509106_67512401_67512570_67514073_67514688_67518155_67518369_67519216_67519503_67530814_67530915_67539839_67539935_67540979_67541051_67544148_67544196_67545337
H1_mix_00068616	chr4	-	2025	1	FSM	ENSG00000279464.1	ENST00000623308.1	2458	1	50	383	50	-383	mono-exon	FALSE	NA	NA	NA	NA	NA	230	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTGTTGTTTCTTCCA	7768	False	NA	NA	False	NA	NA	NA	67610263	67608238	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_67608200_67610300
H1_mix_00068617	chr4	-	2201	11	FSM	ENSG00000033178.13	ENST00000429659.7	2387	11	0	186	0	-186	multi-exon	FALSE	canonical	3	104	junction_3	29.8008389143661	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCCAACATGGCGAAACCC	-2	True	NA	NA	False	NA	NA	NA	67701148	67662672	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_67663948_67665188_67665293_67668550_67668675_67670469_67670593_67673696_67673778_67677610_67677723_67678438_67678534_67681562_67681592_67682118_67682214_67696644_67696708_67701048
H1_mix_00068618	chr4	-	4687	9	NNC	ENSG00000083896.13	novel	3244	16	NA	NA	0	-1309	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_6	90.2898111638296	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGTTGGCTCACATAAT	7527	False	NA	NA	False	AAAAAG	-44	NA	68330073	68311695	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_68314324_68316313_68316449_68318518_68318582_68318689_68318730_68318825_68318863_68320122_68320206_68321371_68322916_68324138_68324224_68330001
H1_mix_00068620	chr4	-	887	1	FSM	ENSG00000272986.1	ENST00000609599.1	745	1	-201	59	-201	-59	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTACTTCTTTGAAAGGA	614	False	NA	-47	True	NA	NA	NA	70704692	70703805	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_70703800_70704700
H1_mix_00068621	chr4	-	9747	35	NNC	ENSG00000132466.20	novel	10797	34	NA	NA	-322	22070	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	65.7729198805966	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGCAAGATAAATTTAAAAA	9	True	NA	NA	False	AAAAAG	-4	NA	73259120	73051305	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_73051337_73074778_73076291_73076939_73077105_73077354_73077534_73078641_73078891_73085248_73085447_73090666_73092301_73094078_73094229_73097116_73097273_73098072_73098521_73102375_73102548_73113791_73113909_73115820_73115917_73118687_73118851_73120161_73120338_73120880_73121095_73121616_73121760_73124912_73125059_73125200_73125313_73135116_73135266_73139530_73140284_73141740_73141844_73142241_73142386_73142639_73142768_73144744_73144833_73146763_73146874_73147240_73147433_73148812_73149051_73151429_73151525_73153879_73154114_73155630_73155779_73156018_73156167_73161191_73161349_73177379_73177534_73258275
H1_mix_00068622	chr4	-	6846	6	FSM	ENSG00000163626.17	ENST00000295890.8	6846	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	6.41872261435249	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTGATCTATGTACAGT	-11	True	NA	NA	False	AATAAA	-20	NA	73069741	73052361	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_73058288_73061812_73061921_73064777_73064900_73065249_73065414_73068028_73068130_73069316
H1_mix_00068625	chr4	-	552	2	FSM	ENSG00000260265.1	ENST00000561705.1	785	2	0	233	0	-10	multi-exon	FALSE	canonical	3	27	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCACAAATTATGACTGG	NA	False	NA	-8	True	AATAAA	-25	NA	75084717	75081934	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75082358_75084588
H1_mix_00068626	chr4	-	1735	8	FSM	ENSG00000163743.14	ENST00000380840.6	1735	8	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_7	225.25468578786	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATACCTCTTACTTCAG	18	True	NA	NA	False	NA	NA	NA	75514286	75481468	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75482667_75490580_75490702_75491610_75491638_75491723_75491783_75491888_75491934_75494100_75494180_75508819_75508936_75514196
H1_mix_00068627	chr4	-	1105	6	FSM	ENSG00000163743.14	ENST00000512567.5	1164	6	59	0	59	0	multi-exon	FALSE	canonical	3	639	junction_5	17.2673101553195	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTTCTAAGACAGTCCT	180	False	NA	-91	True	ATTAAA	-10	NA	75494372	75482085	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75482667_75490580_75490702_75491610_75491638_75491723_75491783_75491888_75491934_75494100
H1_mix_00068629	chr4	-	650	7	FSM	ENSG00000163743.14	ENST00000507014.1	650	7	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_6	298.506700092309	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGCCTACACAGTACTGGA	7	True	NA	NA	False	NA	NA	NA	75514297	75482537	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75482667_75490580_75490702_75491723_75491783_75491888_75491934_75494100_75494180_75508819_75508936_75514196
H1_mix_00068632	chr4	-	4666	12	FSM	ENSG00000138769.11	ENST00000429927.6	3383	12	226	-1509	-4	0	multi-exon	TRUE	canonical	2	7	junction_4	3.72394529968437	175	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTTTTCTCAAGGGTCT	20	True	NA	-1	True	AATAAA	-15	NA	75630490	75576495	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75579179_75581809_75581899_75596246_75596341_75596934_75597237_75598076_75598213_75600280_75600370_75603816_75603957_75605521_75605635_75607182_75607362_75614254_75614450_75625820_75626018_75630041
H1_mix_00068633	chr4	-	5595	14	FSM	ENSG00000138757.15	ENST00000677606.1	5595	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_12	1186.1204275448	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	7	True	NA	NA	False	NA	NA	NA	75724419	75641848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75653982_75654082_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75694797_75695074_75724055_75724177_75724275
H1_mix_00068634	chr4	-	5515	13	FSM	ENSG00000138757.15	ENST00000676470.1	5515	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_11	1059.24000532877	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	-12	True	NA	NA	False	NA	NA	NA	75724438	75641848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75694797_75695074_75724055_75724177_75724275
H1_mix_00068639	chr4	-	532	6	FSM	ENSG00000138744.16	ENST00000513045.6	532	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	22.8962879087419	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCACCTTAAAAAATAAGACA	NA	False	NA	NA	False	AATGAA	-15	NA	75925811	75914304	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75914339_75914867_75914986_75919908_75919976_75920737_75920801_75920950_75921124_75925734
H1_mix_00068640	chr4	-	2337	10	NIC	ENSG00000138744.16	novel	1300	9	NA	NA	0	-31	combination_of_known_splicesites	FALSE	canonical	3	8	junction_1	16.9275872432117	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGTCAAAATAAAATTGTTA	15	True	NA	NA	False	TTTAAA	-18	NA	75940983	75916468	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_75917774_75918760_75918790_75919908_75919976_75920737_75920801_75920950_75921124_75925734_75925812_75931213_75931305_75936108_75936236_75940000_75940166_75940743
H1_mix_00068641	chr4	-	1678	3	FSM	ENSG00000138744.16	ENST00000507187.2	1750	3	0	72	0	-72	multi-exon	FALSE	canonical	3	59	junction_1	4.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGCTAATACTCTTAATAA	15	True	NA	NA	False	NA	NA	NA	75940983	75934962	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75936236_75940000_75940166_75940743
H1_mix_00068646	chr4	-	1563	11	FSM	ENSG00000138750.15	ENST00000514987.5	1563	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	195.27521604136	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGTCACCTCACAGCTC	-2	True	NA	NA	False	NA	NA	NA	76148397	76115205	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_76115495_76117663_76117775_76118074_76118195_76124648_76124757_76130655_76130750_76131229_76131285_76132522_76132720_76134174_76134363_76136185_76136413_76144389_76144474_76148307
H1_mix_00068647	chr4	-	1499	11	FSM	ENSG00000138750.15	ENST00000512151.5	1385	11	-19	-95	0	0	multi-exon	FALSE	canonical	3	20	junction_8	193.577374710993	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGTCACCTCACAGCTC	13	False	NA	NA	False	NA	NA	NA	76148416	76115205	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_76115495_76117663_76117775_76118074_76118195_76124648_76124757_76130655_76130750_76131229_76131285_76132522_76132720_76134174_76134363_76144148_76144293_76144389_76144474_76148307
H1_mix_00068648	chr4	-	314	2	FSM	ENSG00000138750.15	ENST00000504173.1	314	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTTAAAATAGAAAAAAAA	NA	False	NA	NA	False	AATATA	-3	NA	76148444	76124579	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_76124757_76148307
H1_mix_00068649	chr4	-	537	2	FSM	ENSG00000138750.15	ENST00000514313.1	537	2	0	0	0	0	multi-exon	FALSE	canonical	3	592	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTTTGAGAAATAGTGAA	NA	False	NA	NA	False	NA	NA	NA	76134311	76132319	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_76132720_76134174
H1_mix_00068653	chr4	-	1341	1	FSM	ENSG00000249565.2	ENST00000510079.2	1181	1	-197	37	-197	-37	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGATGACCCAGAGGCAT	NA	False	NA	NA	False	NA	NA	NA	78182243	78180902	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_78180900_78182200
H1_mix_00068658	chr4	-	2449	2	Antisense	novelGene_ENSG00000250334.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTTATTTCTTTATTA	NA	False	NA	NA	False	AATGAA	-36	NA	79554653	79539452	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_-_79541160_79553911
H1_mix_00068662	chr4	-	1756	13	FSM	ENSG00000138670.19	ENST00000335927.11	1756	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_11	13.3694822471013	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTCTTTTGTGTGTGTGT	5	True	NA	NA	False	NA	NA	NA	81471904	81427448	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_81427793_81432298_81432372_81433839_81433964_81434638_81434735_81440833_81440930_81442296_81442377_81445525_81445629_81445742_81445839_81447503_81447579_81448068_81448282_81456650_81456789_81459331_81459515_81471769
H1_mix_00068664	chr4	-	1047	4	FSM	ENSG00000138670.19	ENST00000514050.6	537	4	-506	-4	-506	4	multi-exon	FALSE	canonical	2	12	junction_1	7.1336448530109	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTATAATTCAAAGTTTG	NA	False	NA	-8	True	AATAAA	-20	NA	82044750	81602727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_81602923_81824517_81824572_81915310_81915359_82044000
H1_mix_00068666	chr4	-	1507	1	ISM	ENSG00000273156.2	ENST00000610058.2	1899	2	460	0	460	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATTTTTTGCACTGTCTG	3028	False	NA	-3	True	ATTAAA	-16	NA	82346382	82344875	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_82344900_82346400
H1_mix_00068668	chr4	-	4597	2	FSM	ENSG00000138668.19	ENST00000514325.1	4597	2	0	0	0	0	multi-exon	FALSE	canonical	3	6913	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGGCTCTTTTATCAT	786	False	NA	-29	True	AATAAA	-17	NA	82358842	82353828	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82356896_82357312
H1_mix_00068669	chr4	-	2351	9	NNC	ENSG00000152795.18	novel	4372	8	NA	NA	0	12058	intron_retention	FALSE	non_canonical	0	0	junction_1	899.064505124632	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAGAAAGAACAAAAGAA	-23	True	NA	NA	False	AAAAAG	-3	NA	82430462	82410506	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_82410545_82424627_82424884_82426036_82426130_82426462_82426634_82427189_82427305_82427432_82427565_82428017_82428180_82428277_82428447_82429247
H1_mix_00068671	chr4	-	344	1	FSM	ENSG00000214988.4	ENST00000488538.1	813	1	68	401	68	-401	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCCTTCGAGTAGGAGTT	NA	False	NA	NA	False	AAGAAA	-38	NA	82491567	82491223	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82491200_82491600
H1_mix_00068672	chr4	-	304	1	FSM	ENSG00000248113.2	ENST00000506227.2	1268	1	391	573	391	-573	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAAGGCTGGAGAAGGGA	NA	False	NA	NA	False	AAGAAA	-38	NA	82580993	82580689	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82580700_82581000
H1_mix_00068675	chr4	-	4043	26	NIC	ENSG00000138674.17	novel	4255	27	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_13	194.574818514627	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGTGTATAGTCTT	50	True	NA	-35	True	ATTAAA	-14	NA	82891131	82818660	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842139_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881938_82891087
H1_mix_00068676	chr4	-	4057	25	NIC	ENSG00000138674.17	novel	4255	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	188	junction_24	146.807106057196	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGTGTATAGTCTT	-3	True	NA	-35	True	ATTAAA	-14	NA	82891184	82818660	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842139_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881938_82891087
H1_mix_00068677	chr4	-	4081	26	NIC	ENSG00000138674.17	novel	3801	27	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_13	194.681212241962	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGTGTATAGTCTT	-30	True	NA	-35	True	ATTAAA	-14	NA	82891211	82818660	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842184_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
H1_mix_00068678	chr4	-	4043	26	FSM	ENSG00000138674.17	ENST00000443462.6	4042	26	0	-1	0	0	multi-exon	FALSE	canonical	2	19	junction_25	226.529277577977	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGTGTATAGTCTT	3	True	NA	-35	True	ATTAAA	-14	NA	82891178	82818660	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842184_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82861630_82861709_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82891087
H1_mix_00068690	chr4	-	7372	3	FSM	ENSG00000251022.6	ENST00000509007.1	566	3	-410	-6396	-9	-140	multi-exon	FALSE	canonical	3	45	junction_1	212	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCGCGCTGTGATCATT	NA	False	NA	NA	False	NA	NA	NA	82900969	82893148	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82899738_82900076_82900224_82900333
H1_mix_00068691	chr4	-	1768	4	NIC	ENSG00000251022.6	novel	2770	5	NA	NA	21	39	combination_of_known_splicesites	FALSE	canonical	3	33	junction_1	181.382346317263	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTACTGGCTGCTATGGAA	11	True	NA	-56	True	ACTAAA	-41	NA	82900538	82893505	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_82894848_82897988_82898063_82900076_82900224_82900333
H1_mix_00068692	chr4	-	1739	4	NIC	ENSG00000251022.6	novel	516	4	NA	NA	21	39	combination_of_known_junctions	FALSE	canonical	3	41	junction_3	117.109635242651	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTACTGGCTGCTATGGAA	11	True	NA	-56	True	ACTAAA	-41	NA	82900538	82893505	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_82894848_82895691_82895775_82900076_82900224_82900371
H1_mix_00068700	chr4	-	667	5	FSM	ENSG00000145287.11	ENST00000311507.9	1374	5	17	690	3	-50	multi-exon	FALSE	canonical	1	1	junction_4	5.33853912601566	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAATTACATTTGAAA	45	False	NA	-51	True	TATAAA	-2	NA	83114712	83090737	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_83090972_83094677_83094792_83104895_83105021_83107803_83107951_83114665
H1_mix_00068702	chr4	-	2209	9	NNC	ENSG00000163312.11	novel	3543	18	NA	NA	0	16848	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	13.3229125944742	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACCAGCTCGAAGGTAAGA	-12	True	NA	NA	False	NA	NA	NA	83455855	83436871	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_83437098_83439862_83440009_83441304_83441404_83443503_83443615_83446013_83446087_83446834_83447036_83448782_83448962_83453230_83453946_83455396
H1_mix_00068705	chr4	-	14422	67	NIC	ENSG00000163625.16	novel	14559	68	NA	NA	36	-17	combination_of_known_junctions	FALSE	canonical	3	17	junction_65	16.7354572093907	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAATAGTCCAGGTACTT	18	True	NA	-33	True	AATACA	-8	NA	84966654	84669613	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_84672992_84677198_84677397_84678167_84678280_84678918_84679243_84682373_84682471_84683942_84684126_84688085_84688266_84690505_84690665_84691630_84691786_84692884_84693033_84695969_84696183_84696731_84696824_84702352_84702507_84704337_84704445_84705393_84705512_84708908_84709029_84709292_84709348_84713158_84713240_84715297_84715384_84716895_84717017_84718421_84718571_84721408_84721573_84724425_84724595_84726860_84726912_84733381_84733610_84735042_84735121_84736169_84736328_84737183_84737367_84739009_84739120_84740186_84740417_84741760_84741922_84743699_84743800_84751482_84751717_84753696_84753877_84755265_84755401_84756925_84757162_84765809_84766028_84766251_84766373_84772834_84772930_84774819_84774982_84775064_84775139_84778502_84778656_84780107_84780299_84782962_84783075_84785978_84786140_84787481_84787714_84789725_84789908_84794518_84794738_84794878_84794980_84796520_84796753_84797995_84798109_84801649_84801865_84803289_84803468_84809886_84810345_84817391_84817586_84820084_84820187_84821083_84821552_84826814_84826982_84829003_84829191_84831412_84831606_84836928_84837091_84841153_84841264_84849901_84850026_84860411_84860623_84896910_84897011_84932269_84932364_84966208
H1_mix_00068706	chr4	-	277	1	FSM	ENSG00000252062.1	ENST00000516253.1	101	1	33	-209	33	209	mono-exon	FALSE	NA	NA	NA	NA	NA	598	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAAAGTAGTTAATGTT	NA	False	NA	NA	False	ATTAAA	-34	NA	84886453	84886176	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_84886200_84886500
H1_mix_00068707	chr4	-	1705	4	FSM	ENSG00000109339.24	ENST00000641824.1	1871	4	166	0	166	0	multi-exon	FALSE	canonical	1	1	junction_3	15.9234278833282	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTTTATTTTGAGAAATAA	NA	False	NA	-78	True	NA	NA	NA	86032412	86016001	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_86017371_86029196_86029275_86031367_86031432_86032218
H1_mix_00068708	chr4	-	2646	15	FSM	ENSG00000109339.24	ENST00000641737.1	2633	15	0	-13	0	0	multi-exon	FALSE	canonical	2	9	junction_11	12.7663460644279	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTAGAAAGAACATATGT	234	False	NA	-14	True	ATTAAA	-18	NA	86594110	86016477	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_86017371_86029196_86029275_86031367_86031432_86064265_86064391_86067772_86067956_86098523_86098596_86101051_86101218_86101893_86102033_86103185_86103245_86107222_86107353_86159297_86159468_86194308_86194408_86354529_86354645_86453029_86453182_86593909
H1_mix_00068712	chr4	-	4878	16	FSM	ENSG00000118777.12	ENST00000237612.8	4206	16	-498	-174	-113	55	multi-exon	FALSE	canonical	3	9	junction_15	8.8954420288645	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCGATCTCGGCTCACTGCA	153	False	NA	NA	False	NA	NA	NA	88159137	88090094	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_88092382_88094576_88094660_88095519_88095610_88097452_88097608_88099323_88099449_88101229_88101320_88107183_88107267_88113302_88113554_88114956_88115059_88118108_88118261_88121634_88121793_88131060_88131214_88131802_88131918_88132575_88132636_88139792_88140015_88158385
H1_mix_00068713	chr4	-	2501	16	NIC	ENSG00000118777.12	novel	4206	16	NA	NA	117	-1782	combination_of_known_junctions	FALSE	canonical	2	12	junction_15	8.41321711488668	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACATCATGTATCGCATA	-20	True	NA	NA	False	ATTAAA	-14	NA	88158907	88092050	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_88092382_88094576_88094660_88095519_88095610_88097452_88097608_88099323_88099449_88101229_88101320_88107183_88107267_88113302_88113554_88114956_88115059_88118108_88118261_88121634_88121793_88131060_88131214_88131802_88131918_88132575_88132636_88139792_88140015_88158576
H1_mix_00068715	chr4	-	582	2	FSM	ENSG00000163644.15	ENST00000511506.1	582	2	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAAGGTACTACCACC	7176	False	NA	NA	False	AAGAAA	-7	NA	88277567	88268749	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_88268907_88277142
H1_mix_00068716	chr4	-	424	1	FSM	ENSG00000200469.1	ENST00000363599.1	104	1	0	-320	0	320	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATTTAAAAATTTTATTC	9435	False	NA	NA	False	TTTAAA	-16	NA	88275308	88274884	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_88274900_88275300
H1_mix_00068723	chr4	-	2767	5	FSM	ENSG00000138640.15	ENST00000509094.5	2762	5	0	-5	0	5	multi-exon	FALSE	canonical	3	16	junction_1	22.7211355350035	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCTTAAGTATTTCTTTA	9	True	NA	NA	False	AATAAA	-6	NA	89057162	88936277	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_88938242_88990972_88991151_89020459_89020670_89029459_89029650_89056937
H1_mix_00068724	chr4	-	12270	2	FSM	ENSG00000185477.5	ENST00000609438.2	14037	2	0	1767	0	-1767	multi-exon	FALSE	canonical	0	0	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCTCCAGCTGCTGTGT	-16	True	NA	NA	False	TTTAAA	-34	NA	89307800	89238149	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_89250234_89307614
H1_mix_00068725	chr4	-	905	6	FSM	ENSG00000145335.17	ENST00000508895.5	905	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	111.84560787085	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTTTTAATGATACTG	0	True	NA	64	True	NA	NA	NA	89836213	89726257	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_89726661_89729193_89729278_89822245_89822389_89828142_89828185_89835546_89835693_89836126
H1_mix_00068727	chr4	-	10844	3	Fusion	ENSG00000249152.1_ENSG00000280056.1	novel	616	2	NA	NA	-227	7493	multi-exon	FALSE	canonical	3	190	junction_1	396.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTCTCATGTATATCTTT	NA	False	NA	-14	True	AATAAA	-22	NA	92277302	92252873	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr4_-_92263351_92269242_92269357_92277049
H1_mix_00068728	chr4	-	5614	4	NNC	ENSG00000249152.1	novel	616	2	NA	NA	-227	15891	at_least_one_novel_splicesite	FALSE	canonical	3	174	junction_1	361.637325998791	175	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGTCTCATGTATATCT	NA	False	NA	-16	True	AATAAA	-20	NA	92277302	92252875	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_92257958_92263190_92263356_92269242_92269357_92277049
H1_mix_00068729	chr4	-	292	1	FSM	ENSG00000249239.2	ENST00000510601.2	933	1	637	4	637	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGATATTTATGGCAGAAC	574	False	NA	NA	False	NA	NA	NA	92822281	92821989	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_92822000_92822300
H1_mix_00068731	chr4	-	660	5	NNC	ENSG00000246541.2	novel	1042	9	NA	NA	31916	-46203	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	14.6116391962025	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGCTATTATGATAGTAA	NA	False	NA	NA	False	AATAAA	-18	NA	94175640	94163994	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_94164229_94165115_94165197_94165847_94165926_94170814_94171012_94175570
H1_mix_00068732	chr4	-	3419	3	Antisense	novelGene_ENSG00000253170.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	8	junction_1	5	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAGGAAAACAAGGAGCTG	NA	False	NA	NA	False	NA	NA	NA	97141454	97107353	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_-_97110427_97134546_97134736_97141297
H1_mix_00068737	chr4	-	825	1	FSM	ENSG00000272777.1	ENST00000609071.1	870	1	207	-162	207	162	mono-exon	FALSE	NA	NA	NA	NA	NA	1071	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGCACAAATAGGAGATTG	7113	False	NA	NA	False	AATAAA	-22	NA	99067918	99067093	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_99067100_99067900
H1_mix_00068746	chr4	-	3245	10	NNC	ENSG00000138821.14	novel	3068	9	NA	NA	97	58296	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	121.755776601369	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGGATATTGTGTCCTG	139	False	NA	NA	False	NA	NA	NA	102345340	102192783	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_102192817_102261665_102263194_102267489_102267675_102267871_102268080_102304316_102304482_102304988_102305112_102307435_102307606_102315667_102315831_102344443_102344916_102345142
H1_mix_00068747	chr4	-	3233	10	NNC	ENSG00000138821.14	novel	3152	9	NA	NA	-1	58296	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	108.495775647411	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGGATATTGTGTCCTG	NA	False	NA	NA	False	NA	NA	NA	102345532	102192783	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_102192815_102261665_102263194_102267489_102267675_102267871_102268080_102304316_102304482_102304988_102305112_102307435_102307606_102315667_102315831_102344443_102344916_102345344
H1_mix_00068748	chr4	-	3068	9	FSM	ENSG00000138821.14	ENST00000682227.1	3068	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_8	97.2605232095736	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAAACCATGTATTGTG	-1	True	NA	-13	True	ATTAAA	-31	NA	102345207	102261676	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_102263194_102267489_102267675_102267871_102268080_102304316_102304482_102304988_102305112_102307435_102307606_102315667_102315831_102344443_102344916_102345142
H1_mix_00068749	chr4	-	374	1	FSM	ENSG00000260651.1	ENST00000563833.1	479	1	-94	199	-94	-199	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAGGGAAGCCCCCAGGAA	397	False	NA	NA	False	GGGGCT	-45	NA	102501413	102501039	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_102501000_102501400
H1_mix_00068750	chr4	-	2577	16	FSM	ENSG00000109323.11	ENST00000505239.1	2577	16	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_13	29.9387522934555	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAACAGAGACAAGGAGAG	11	True	NA	NA	False	AATAAA	-30	NA	102760933	102631987	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_102632282_102634787_102635046_102635864_102636008_102639712_102639858_102650536_102650702_102657681_102657901_102664684_102664853_102668962_102669050_102671280_102671399_102673918_102674071_102689573_102689685_102690595_102690772_102714437_102714562_102723861_102723968_102726588_102726684_102760717
H1_mix_00068752	chr4	-	4150	8	FSM	ENSG00000109332.20	ENST00000394804.6	4166	8	16	0	16	0	multi-exon	FALSE	canonical	0	0	junction_3	1498.1571400646	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTTGGTCTTACTCGGT	251	False	NA	-4	True	ATTAAA	-15	NA	102827932	102794385	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826845_102827591
H1_mix_00068758	chr4	-	805	4	FSM	ENSG00000164038.16	ENST00000515424.5	793	4	0	-12	0	12	multi-exon	TRUE	canonical	2	7	junction_2	9.46337971105226	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCAACAGCTACTATTGT	9825	False	NA	NA	False	AATAAA	-12	NA	103067499	103048578	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_103049021_103050239_103050383_103066326_103066508_103067460
H1_mix_00068759	chr4	-	824	4	FSM	ENSG00000164038.16	ENST00000505838.1	824	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	9.46337971105226	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACCTCACATAGCTGTC	-1	True	NA	NA	False	NA	NA	NA	103076336	103065410	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_103065769_103066326_103066508_103067460_103067593_103076183
H1_mix_00068763	chr4	-	8673	47	FSM	ENSG00000138778.14	ENST00000380026.8	8742	47	63	6	-33	-6	multi-exon	FALSE	canonical	3	15	junction_11	30.1846945404298	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAACTTTTTTGTGTGGA	10	True	NA	NA	False	NA	NA	NA	103198382	103105354	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_103106317_103108802_103109090_103110827_103111012_103114454_103114553_103116576_103116690_103120147_103120334_103122870_103123090_103132692_103132897_103133694_103133893_103136140_103136360_103138350_103138453_103140255_103140415_103140813_103141105_103141749_103141909_103143247_103143407_103144330_103144619_103145049_103145335_103145522_103145682_103145828_103146108_103147355_103147647_103148843_103149000_103149117_103149409_103151218_103151378_103153046_103153251_103158299_103158459_103158613_103158887_103159009_103159325_103160624_103160780_103161085_103161252_103161334_103161458_103163136_103163257_103174735_103174904_103175959_103176049_103176898_103177047_103180310_103180470_103181336_103181457_103182761_103182892_103183200_103183289_103185809_103185862_103194228_103194295_103194373_103194442_103194602_103194685_103195113_103195234_103195919_103196039_103196162_103196253_103196758_103196851_103198263
H1_mix_00068764	chr4	-	11467	30	NIC	ENSG00000138778.14	novel	8541	49	NA	NA	16091	0	intron_retention	FALSE	canonical	3	37	junction_29	26.9135224974799	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCGCTCTTCTATATAAT	NA	False	NA	-13	True	AATAAA	-18	NA	103165872	103105810	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_103109090_103110827_103111012_103114454_103114553_103116576_103116690_103120147_103120334_103122870_103123090_103132692_103132897_103133694_103133893_103136140_103136360_103138350_103138450_103140255_103140415_103140813_103141105_103141749_103141909_103143247_103143407_103144330_103144619_103145049_103145335_103145522_103145682_103145828_103146108_103147355_103147647_103148843_103149000_103149117_103149409_103151218_103151378_103153046_103153251_103158299_103158459_103158613_103158887_103159009_103159325_103160624_103160780_103161085_103161458_103163136_103163257_103163478
H1_mix_00068767	chr4	-	466	2	FSM	ENSG00000138785.16	ENST00000493425.1	644	2	178	0	178	0	multi-exon	FALSE	canonical	3	176	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACGCCCACTGTACCTTTA	1816	False	NA	NA	False	NA	NA	NA	105686901	105683061	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_105683318_105686691
H1_mix_00068771	chr4	-	3430	4	FSM	ENSG00000155011.9	ENST00000285311.8	3654	4	224	0	224	0	multi-exon	FALSE	canonical	0	0	junction_3	0.471404520791032	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAAGCTCCTTGTCTTTT	221	False	NA	NA	False	ATTAAA	-23	NA	107036089	106921801	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_106924205_106924544_106924701_106925798_106925950_107035369
H1_mix_00068772	chr4	-	587	5	FSM	ENSG00000138801.9	ENST00000514489.5	579	5	-8	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	307.487703006153	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTCTGCATGTTTGTGA	-2	True	NA	NA	False	NA	NA	NA	107720234	107687111	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_107687178_107693770_107694007_107701170_107701286_107718341_107718397_107720119
H1_mix_00068776	chr4	-	6339	23	NIC	ENSG00000188517.17	novel	8026	39	NA	NA	-66482	0	intron_retention	FALSE	canonical	0	0	junction_15	4.91434903586233	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCCTCTTTTCTTTGA	NA	False	NA	NA	False	TATAAA	-23	NA	108899174	108808724	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_108813930_108817396_108817436_108819811_108819899_108824173_108824228_108825195_108825223_108827134_108827189_108832379_108832434_108834354_108834391_108838097_108838179_108841694_108841722_108844518_108844570_108845188_108845252_108846138_108846220_108848758_108848804_108852235_108852281_108859655_108859734_108860926_108860972_108863318_108863388_108869087_108869151_108889220_108889257_108889700_108889734_108896666_108896712_108899153
H1_mix_00068777	chr4	-	538	4	FSM	ENSG00000138794.10	ENST00000505486.1	538	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	140.729054095687	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAGGAGACAAGTGTCAC	NA	False	NA	NA	False	NA	NA	NA	109703583	109694580	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_109694701_109697621_109697769_109698299_109698343_109703355
H1_mix_00068780	chr4	-	6594	5	NNC	ENSG00000170522.10	novel	6570	4	NA	NA	0	12998	intron_retention	TRUE	non_canonical	0	0	junction_1	124.8466559424	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGAGTTGCCAGCTCTTT	-15	True	NA	NA	False	NA	NA	NA	110198615	110032847	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_110032872_110045845_110051763_110059602_110059755_110105496_110105629_110198246
H1_mix_00068783	chr4	-	2100	4	FSM	ENSG00000164093.18	ENST00000355080.9	2100	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	10.1434160364686	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTGGATTCTTTCTCC	4827	False	NA	-9	True	AGTAAA	-17	NA	110637352	110617422	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_110618689_110621163_110621370_110632952_110633009_110636780
H1_mix_00068784	chr4	-	1496	1	FSM	ENSG00000164093.18	ENST00000607868.1	1398	1	-94	-4	-94	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGTCTGGATTCTTTCT	4186	False	NA	-11	True	AGTAAA	-15	NA	110618920	110617424	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_110617400_110618900
H1_mix_00068785	chr4	-	6529	27	NIC	ENSG00000138658.16	novel	6648	28	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	47	junction_17	22.2800890228003	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTAAACACATGTAAAAATT	-11	True	NA	-95	True	ATTAAA	-22	NA	112636898	112539428	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_112539690_112539862_112540125_112540820_112540956_112541091_112541269_112547284_112547409_112548252_112548381_112553834_112553983_112554704_112554783_112558149_112558310_112560732_112560996_112562370_112562486_112563130_112563275_112581662_112581803_112583977_112584175_112585540_112585726_112586444_112586584_112587279_112587930_112589723_112589875_112606007_112606092_112609378_112609430_112612523_112612589_112617439_112619691_112620001_112620191_112623816_112623877_112631929_112632011_112633155_112633243_112636694
H1_mix_00068786	chr4	-	3347	11	FSM	ENSG00000138658.16	ENST00000309071.9	3347	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	32.5570268912872	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCAGTGTCATATCCCTT	484	False	112636928	NA	False	AATATA	-12	NA	112636910	112589629	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_112589875_112603523_112603698_112606007_112606092_112609378_112609430_112612523_112612589_112617439_112619691_112620001_112620191_112623816_112623877_112631929_112632011_112633155_112633243_112636850
H1_mix_00068787	chr4	-	380	5	NNC	ENSG00000249532.6	novel	389	3	NA	NA	0	54379	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11646.1993907884	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATGAATGAGAGGTAAGAA	2	True	NA	NA	False	NA	NA	NA	112648699	112592096	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_112592116_112639208_112639228_112646725_112646969_112647414_112647468_112648653
H1_mix_00068788	chr4	-	640	3	FSM	ENSG00000249532.6	ENST00000510655.1	640	3	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	9.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTAGTTATTCTTGATTC	1679	False	NA	NA	False	TATAAA	-13	NA	112650051	112646475	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_112646969_112648512_112648600_112649991
H1_mix_00068789	chr4	-	1940	19	FSM	ENSG00000145349.18	ENST00000342666.9	1940	19	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	38.308405743613	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTTTTTTTTTTTTTAA	1551	False	NA	NA	False	NA	NA	NA	113761068	113454104	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_113454516_113455725_113455822_113457334_113457564_113460146_113460242_113465528_113465605_113500462_113500512_113509637_113509676_113513327_113513371_113513829_113513914_113515068_113515192_113517562_113517658_113531215_113531300_113537340_113537444_113548656_113548730_113552030_113552097_113609151_113609207_113661712_113661773_113759319_113759415_113761003
H1_mix_00068791	chr4	-	879	4	FSM	ENSG00000164099.3	ENST00000515089.1	879	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	7.71722460186015	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTATTTTCTGTTTTTTG	13	True	NA	NA	False	NA	NA	NA	118313276	118303277	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_118303880_118305944_118306004_118308435_118308578_118313200
H1_mix_00068793	chr4	-	4753	3	ISM	ENSG00000283050.3	ENST00000652173.1	770	5	2764	-4362	2764	-7	3prime_fragment	FALSE	canonical	3	8	junction_2	4	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCCGTGATCAACGTGTT	NA	False	NA	-10	True	AATAAA	-5	NA	119410602	119405529	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_119410139_119410231_119410290_119410516
H1_mix_00068794	chr4	-	950	2	FSM	ENSG00000283050.3	ENST00000690009.1	1175	2	36	189	-1	0	multi-exon	FALSE	canonical	1	1	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTAAGCTTGTATACATTT	NA	False	NA	NA	False	AATAAA	-19	NA	119454611	119449566	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_119450151_119454245
H1_mix_00068795	chr4	-	2685	20	ISM	ENSG00000138735.16	ENST00000354960.8	6959	21	18	6687	18	-267	5prime_fragment	TRUE	canonical	3	69	junction_14	12.4606860991256	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCCTATATTTTGCTTCTA	239	False	NA	NA	False	NA	NA	NA	119628786	119501089	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_119501254_119502580_119502656_119504535_119504600_119505854_119505933_119507603_119507705_119511046_119511135_119519044_119519140_119520934_119521061_119525548_119525696_119538959_119539020_119542458_119542635_119552549_119552638_119553637_119553747_119560295_119560364_119562832_119562971_119565320_119565411_119567072_119567145_119596522_119596613_119606708_119607298_119628519
H1_mix_00068797	chr4	-	5078	16	NNC	ENSG00000138738.11	novel	5207	16	NA	NA	0	46542	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	16.7087468776752	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAGAAAGAAAGA	168	False	NA	NA	False	NA	NA	NA	120922681	120638376	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_120638392_120691920_120695276_120710308_120710414_120754552_120754639_120777187_120777282_120781142_120781304_120784997_120785092_120798266_120798425_120799660_120799746_120811369_120811450_120816452_120816575_120818352_120818528_120821170_120821346_120853417_120853541_120907473_120907558_120922515
H1_mix_00068798	chr4	-	5201	16	FSM	ENSG00000138738.11	ENST00000264808.8	5207	16	0	6	0	-6	multi-exon	FALSE	canonical	3	13	junction_10	15.3674981698388	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACCAGACTTGGTGTTAGC	-7	True	NA	-7	True	AATAAA	-14	NA	120922726	120691920	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_120695276_120710308_120710414_120754552_120754639_120777187_120777282_120781142_120781304_120784997_120785092_120798266_120798425_120799660_120799746_120811369_120811450_120816452_120816575_120816831_120816925_120818352_120818528_120821170_120821346_120853417_120853541_120907473_120907558_120922515
H1_mix_00068803	chr4	-	2957	20	NIC	ENSG00000138686.10	novel	3840	19	NA	NA	46	-194	combination_of_known_junctions	FALSE	canonical	3	4	junction_1	79.516440224195	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGCATCTTCATTAGGA	8825	False	NA	-43	True	NA	NA	NA	121870404	121824522	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_121825229_121825847_121825994_121828145_121828270_121828401_121828506_121828618_121828729_121833230_121833396_121835143_121835284_121839630_121839697_121843926_121844002_121845503_121845697_121847403_121847507_121848843_121848929_121852955_121853087_121854703_121854821_121855488_121855562_121858991_121859179_121861503_121861680_121863216_121863280_121867980_121868047_121870277
H1_mix_00068804	chr4	-	250	1	FSM	ENSG00000237868.1	ENST00000413478.1	479	1	279	-50	279	50	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGCCACCCCAACTCCTG	NA	False	NA	NA	False	NA	NA	NA	122078039	122077789	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_122077800_122078000
H1_mix_00068805	chr4	-	1360	3	FSM	ENSG00000224786.3	ENST00000641807.2	1455	3	0	95	0	-25	multi-exon	FALSE	canonical	1	2	junction_2	1.5	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCATTTTACATACAAGAAAA	40	False	NA	NA	False	AGTAAA	-34	NA	122732474	122729605	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_122730636_122732051_122732194_122732286
H1_mix_00068806	chr4	-	1240	3	FSM	ENSG00000224786.3	ENST00000641995.1	1253	3	-12	25	-4	-25	multi-exon	FALSE	canonical	1	2	junction_2	1.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCATTTTACATACAAGAAAA	28	False	NA	NA	False	AGTAAA	-34	NA	122732486	122729605	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_122730636_122732051_122732194_122732418
H1_mix_00068810	chr4	-	4160	4	FSM	ENSG00000164073.11	ENST00000641146.1	4780	4	620	0	144	0	multi-exon	FALSE	canonical	3	44	junction_2	20.4178571081514	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTTACCTGCATCTGTT	NA	False	NA	NA	False	CATAAA	-37	NA	127933093	127917959	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_127921772_127921859_127921964_127930682_127930818_127932984
H1_mix_00068812	chr4	-	1813	11	FSM	ENSG00000164073.11	ENST00000513559.6	1813	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	40.1746188532013	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATACCCACTGCAGAAGTG	-10	True	NA	-10	True	AATAAA	-17	NA	127965230	127920321	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_127920837_127921523_127921772_127921859_127921964_127930682_127930818_127932984_127933094_127938782_127938837_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957591_127965071
H1_mix_00068814	chr4	-	6959	9	FSM	ENSG00000250241.7	ENST00000667505.1	8044	9	35	1050	0	-1050	multi-exon	FALSE	canonical	3	8	junction_2	5.73230974389905	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCATCCTGAAACCTAGCT	-4	True	NA	NA	False	NA	NA	NA	133149112	133089719	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_133095951_133096735_133096884_133138959_133139034_133139825_133139882_133140585_133140660_133142710_133142783_133145603_133145746_133147198_133147277_133149028
H1_mix_00068815	chr4	-	326	3	Intergenic	novelGene_1108	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	14	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCAAGTAATCTGTCTTC	1	True	NA	NA	False	AATAAA	-18	NA	133534236	133497713	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_-_133497767_133525877_133525973_133534058
H1_mix_00068816	chr4	-	227	1	FSM	ENSG00000249311.4	ENST00000505638.2	1227	1	845	155	845	-155	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCTGAGATCTGGCGTG	NA	False	NA	NA	False	AAAAAG	-27	NA	136355491	136355264	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_136355300_136355500
H1_mix_00068817	chr4	-	4625	5	FSM	ENSG00000189184.12	ENST00000507846.5	4625	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	99.3994466785404	1775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAAGGAACTGTCTATAAG	-9	True	NA	-17	True	AATAAA	-18	NA	137532494	137519702	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_137521697_137528477_137528642_137528731_137528818_137529601_137531743_137532254
H1_mix_00068818	chr4	-	1483	5	FSM	ENSG00000189184.12	ENST00000510305.5	1483	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	114.569847691266	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATACATTTGTACCTTA	-9	True	NA	30	True	NA	NA	NA	137532494	137520837	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_137521697_137528477_137528642_137528731_137528821_137529601_137529733_137532254
H1_mix_00068819	chr4	-	355	2	FSM	ENSG00000249091.1	ENST00000507220.1	405	2	0	50	0	-50	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTGTACGGACTAAGATA	7835	False	NA	NA	False	NA	NA	NA	138281784	138277164	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_138277474_138281738
H1_mix_00068820	chr4	-	3278	9	FSM	ENSG00000109381.21	ENST00000379550.5	3278	9	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_5	40.3513862834971	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATATCTGCATGTTGCCA	25	False	NA	NA	False	AAGAAA	-28	NA	139139476	139057716	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_139059608_139060323_139060675_139061864_139062058_139067683_139067771_139071865_139072040_139073453_139073568_139125163_139125330_139137629_139137868_139139412
H1_mix_00068821	chr4	-	3838	10	FSM	ENSG00000109381.21	ENST00000686138.1	4003	10	-432	597	-432	-7	multi-exon	FALSE	canonical	3	89	junction_5	38.2499899136596	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGTTTTGGTCTCTGG	256	False	NA	-5	True	AATATA	-14	NA	139177650	139057861	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_139059608_139060323_139060675_139061864_139062058_139067683_139067771_139071865_139072040_139073453_139073568_139125163_139125330_139137629_139137868_139139412_139139498_139176966
H1_mix_00068822	chr4	-	4172	11	NNC	ENSG00000109381.21	novel	4003	10	NA	NA	-663	-7	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_7	58.2010309187045	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGTTTTGGTCTCTGG	25	False	NA	-5	True	AATATA	-14	NA	139177881	139057861	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_139059608_139060323_139060675_139061864_139062058_139067683_139067771_139071865_139072040_139073453_139073568_139116648_139116752_139125163_139125330_139137629_139137868_139139412_139139498_139176966
H1_mix_00068825	chr4	-	1263	6	FSM	ENSG00000109390.13	ENST00000544855.5	1257	6	0	-6	0	6	multi-exon	FALSE	canonical	2	5	junction_5	1536.54724626352	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATGTTAATTCTAAGGT	1312	False	NA	8	True	GATAAA	-21	NA	139301210	139289910	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_139290093_139292529_139292610_139295042_139295147_139295731_139295961_139297384_139297444_139300601
H1_mix_00068826	chr4	-	767	6	FSM	ENSG00000109390.13	ENST00000394228.5	761	6	0	-6	0	6	multi-exon	FALSE	canonical	3	4	junction_5	1537.03681153055	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATGTTAATTCTAAGGT	NA	False	NA	8	True	GATAAA	-21	NA	139302551	139289910	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_139290093_139292529_139292610_139295042_139295147_139295731_139295961_139296331_139296368_139302415
H1_mix_00068827	chr4	-	2282	4	FSM	ENSG00000109390.13	ENST00000676245.1	2282	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	1490.23853422494	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATATGTGAATATATATC	10	True	NA	-101	True	NA	NA	NA	139302477	139290019	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_139290093_139295042_139295147_139295731_139295961_139300601
H1_mix_00068829	chr4	-	5334	1	FSM	ENSG00000273247.6	ENST00000610159.1	5334	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAATAAAATGAAGATATT	257	False	NA	NA	False	NA	NA	NA	139453776	139448442	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_139448400_139453800
H1_mix_00068830	chr4	-	4839	18	ISM	ENSG00000109436.8	ENST00000442267.3	5554	21	76543	14	-2741	-14	3prime_fragment	TRUE	canonical	3	13	junction_17	3.85193071617527	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAAATACTCAGATACAGC	NA	False	NA	-24	True	AATAAA	-5	NA	140679842	140620795	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_140622918_140624115_140624220_140624313_140624389_140627440_140627528_140628299_140628366_140633947_140634189_140639085_140639155_140639329_140639429_140657096_140657227_140657526_140657813_140659587_140659706_140661892_140662108_140668916_140669068_140669633_140669805_140670719_140670927_140676893_140677102_140678941_140679204_140679614
H1_mix_00068831	chr4	-	946	1	FSM	ENSG00000228981.3	ENST00000475555.1	843	1	-10	-93	-10	93	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAATCTAGGAAGGGGG	4682	False	NA	NA	False	AATAAA	-38	NA	143350127	143349181	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_143349200_143350100
H1_mix_00068832	chr4	-	262	1	FSM	ENSG00000249741.2	ENST00000502554.2	540	1	274	4	274	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	282	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGTAGCTTAACATTATAAA	NA	False	NA	NA	False	NA	NA	NA	143911779	143911517	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_143911500_143911800
H1_mix_00068833	chr4	-	663	4	NIC	ENSG00000164162.14	novel	689	7	NA	NA	0	-24	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	95.6184547505809	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATATTATCTTTATTTTC	390	False	NA	NA	False	AATAAA	-7	NA	145098180	144995219	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_144995604_145081659_145081751_145095984_145096112_145098119
H1_mix_00068834	chr4	-	7776	22	NNC	ENSG00000164164.17	novel	7741	21	NA	NA	-1	83852	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	36.576822518888	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	33	False	145180623	NA	False	NA	NA	NA	145180590	145026985	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_145027019_145133648_145138651_145139950_145139992_145141378_145141640_145142195_145142335_145143364_145143446_145143945_145144002_145144310_145144435_145146266_145146430_145150512_145150700_145150801_145150906_145152540_145152636_145155410_145155476_145155568_145155687_145155935_145155997_145159502_145159636_145162639_145162722_145164153_145164227_145165150_145165198_145171669_145171721_145174660_145174745_145179814
H1_mix_00068836	chr4	-	7342	21	NIC	ENSG00000164164.17	novel	7741	21	NA	NA	-264	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_13	30.8129842761132	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTGTGATTCTTTGGT	-3	True	NA	-4	True	ATTAAA	-15	NA	145180192	145133648	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_145138651_145139950_145139992_145141378_145141640_145142195_145142335_145143364_145143446_145143945_145144002_145144310_145144435_145146266_145146430_145150512_145150700_145150801_145150906_145152540_145152636_145155410_145155476_145155568_145155684_145155935_145155997_145159502_145159636_145162639_145162722_145164153_145164227_145165150_145165198_145171669_145171721_145174660_145174745_145179814
H1_mix_00068838	chr4	-	7187	14	FSM	ENSG00000151612.18	ENST00000503462.3	7187	14	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	9.55024086563873	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATATACTCTAATTAAAAAA	593	False	NA	NA	False	NA	NA	NA	145938430	145757664	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_145761599_145764987_145765166_145765546_145765739_145774505_145774673_145775788_145775961_145779373_145779512_145823421_145823526_145845955_145846014_145849321_145849562_145870244_145870479_145885677_145886159_145892242_145892416_145902165_145903216_145938364
H1_mix_00068839	chr4	-	7857	15	FSM	ENSG00000151612.18	ENST00000379448.9	4156	15	-628	-3073	-235	0	multi-exon	FALSE	canonical	0	0	junction_2	10.7383064069618	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATATACTCTAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	145939058	145757664	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_145761599_145763089_145763123_145764978_145765166_145765546_145765739_145774505_145774673_145775788_145775961_145779373_145779512_145823421_145823526_145845955_145846014_145849321_145849562_145870244_145870479_145885677_145886159_145892242_145892416_145902165_145903216_145938364
H1_mix_00068840	chr4	-	529	1	FSM	ENSG00000151612.18	ENST00000671983.1	3524	1	922	2073	922	-997	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCCAAAAAGGGCCGTTC	NA	False	NA	NA	False	NA	NA	NA	145762300	145761771	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_145761800_145762300
H1_mix_00068841	chr4	-	502	1	FSM	ENSG00000279481.1	ENST00000623323.1	2525	1	-140	2163	-140	-2163	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGACATGACTCAAAACAG	3021	False	NA	NA	False	NA	NA	NA	145833120	145832618	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_145832600_145833100
H1_mix_00068842	chr4	-	3843	13	FSM	ENSG00000120519.16	ENST00000507030.5	1134	13	-205	-2504	0	-6	multi-exon	FALSE	canonical	1	1	junction_2	3.22641011376766	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACAAGAGAAACTGTGGCT	4	True	NA	-9	True	ATTAAA	-19	NA	146521922	146253986	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_146256521_146256825_146256937_146258691_146258838_146283191_146283266_146292928_146292981_146293929_146294096_146305925_146306010_146325960_146325997_146442782_146442822_146503848_146503925_146509912_146510050_146517037_146517121_146521617
H1_mix_00068845	chr4	-	4044	13	FSM	ENSG00000109686.19	ENST00000478503.6	4038	13	0	-6	0	0	multi-exon	FALSE	canonical	3	179	junction_9	34.4773476358028	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTCTCATACTAGACTGA	9246	False	NA	-2	True	AATAAA	-22	NA	151166320	151120280	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_151122208_151127617_151127716_151128169_151128357_151132330_151132384_151133033_151133237_151135073_151135133_151137731_151137863_151139774_151139848_151143909_151144051_151147921_151148187_151149499_151149562_151159239_151159353_151165588
H1_mix_00068846	chr4	-	1860	13	FSM	ENSG00000059691.12	ENST00000503160.5	1860	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_10	41.064650924555	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGATACTGTTACCCATT	67	False	NA	-29	True	AATAAA	-9	NA	151760930	151670862	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_151671303_151672761_151672897_151679812_151679892_151688629_151688764_151701328_151701519_151703850_151703896_151705184_151705270_151707987_151708102_151716008_151716132_151716875_151717002_151719424_151719539_151758771_151758923_151760806
H1_mix_00068847	chr4	-	1519	8	FSM	ENSG00000059691.12	ENST00000512306.5	1519	8	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_3	19.025224930956	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGATAATTGAAACTTTTA	12	True	NA	NA	False	AATAAA	-21	NA	151760985	151703341	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_151703896_151705184_151705270_151707987_151708102_151716008_151716132_151716875_151717075_151719424_151719539_151758771_151758923_151760806
H1_mix_00068848	chr4	-	371	2	FSM	ENSG00000170006.12	ENST00000510252.1	811	2	440	0	440	0	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCAACTTCTAGCTCACT	2504	False	NA	NA	False	NA	NA	NA	152640985	152628248	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_152628562_152640927
H1_mix_00068850	chr4	-	1256	7	NIC	ENSG00000145428.15	novel	1358	9	NA	NA	-150	-8	combination_of_known_splicesites	FALSE	canonical	3	14	junction_5	24.5249306262469	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCATTACAGCTGTTTCTT	9	True	NA	NA	False	AATAAA	-26	NA	153760174	153710167	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_153710490_153715528_153715663_153720183_153720305_153723350_153723459_153728206_153728362_153751437_153751476_153759796
H1_mix_00068851	chr4	-	1185	8	NIC	ENSG00000145428.15	novel	1358	9	NA	NA	1	-3	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_1	27.5651362175825	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGCTGTTTCTTAACTC	5	True	NA	NA	False	AATAAA	-31	NA	153759996	153710162	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_153710490_153712474_153712577_153715528_153715663_153720183_153720305_153723350_153723459_153728206_153728362_153751437_153751476_153759796
H1_mix_00068853	chr4	-	473	1	FSM	ENSG00000197410.14	ENST00000624983.1	2280	1	2171	-364	2171	364	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTTTGTCTGATGGAA	NA	False	NA	NA	False	NA	NA	NA	154332997	154332524	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_154332500_154333000
H1_mix_00068854	chr4	-	3325	15	FSM	ENSG00000171566.12	ENST00000302078.9	1673	15	-38	-1614	-35	0	multi-exon	FALSE	canonical	3	26	junction_11	153.884929179473	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTGCATTCCTGAGAGAT	-27	True	NA	-8	True	AATAAA	-16	NA	154550435	154535004	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_154536745_154537285_154537480_154537968_154538109_154539104_154539214_154539950_154540054_154540593_154540696_154540784_154540935_154542186_154542280_154544444_154544547_154545835_154545924_154546122_154546214_154547037_154547065_154547710_154547854_154548828_154548936_154550299
H1_mix_00068855	chr4	-	570	2	FSM	ENSG00000171566.12	ENST00000512773.1	570	2	0	0	0	0	multi-exon	FALSE	canonical	3	508	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTATTCTAGATGTAATA	NA	False	NA	77	True	AGTAAA	-18	NA	154537542	154536431	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_154536745_154537285
H1_mix_00068856	chr4	-	543	3	FSM	ENSG00000171566.12	ENST00000506918.1	543	3	0	0	0	0	multi-exon	FALSE	canonical	3	521	junction_2	54.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATACTTACATTGTTCT	4454	False	NA	NA	False	TTTAAA	-40	NA	154545954	154541957	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_154542280_154544444_154544547_154545835
H1_mix_00068858	chr4	-	7532	14	NIC	ENSG00000164114.19	novel	7328	14	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	18	junction_13	18.1685077691101	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGATGCCTTTTTATGTT	-2	True	NA	-38	True	AATAAA	-19	NA	155376778	155342658	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_155347906_155352595_155352729_155352911_155353058_155353178_155353341_155355070_155355161_155355715_155355885_155357448_155357520_155360167_155360416_155362047_155362142_155368585_155368810_155373135_155373457_155374936_155375022_155375775_155375915_155376375
H1_mix_00068862	chr4	-	3387	3	NNC	ENSG00000205208.5	novel	3366	2	NA	NA	5	58395	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	288.5	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGGAATACAAATTGCTC	-7	True	NA	NA	False	NA	NA	NA	158671882	158608279	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_158608309_158666677_158669769_158671615
H1_mix_00068864	chr4	-	543	1	FSM	ENSG00000240674.1	ENST00000494303.1	480	1	-23	-40	-23	40	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GTAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	AATAAA	-18	NA	165012868	165012325	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_165012300_165012900
H1_mix_00068868	chr4	-	475	2	FSM	ENSG00000154447.15	ENST00000502315.1	487	2	12	0	12	0	multi-exon	FALSE	canonical	2	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGCACTGTGGCTAATT	207	False	NA	NA	False	NA	NA	NA	169270837	169268913	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_169269308_169270756
H1_mix_00068871	chr4	-	548	2	FSM	ENSG00000056050.7	ENST00000515204.1	548	2	0	0	0	0	multi-exon	FALSE	canonical	3	695	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTTTATAAGGTTCTTC	NA	False	NA	-16	True	AATAAA	-11	NA	169732018	169729476	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_169729710_169731703
H1_mix_00068874	chr4	-	629	5	FSM	ENSG00000109576.14	ENST00000505906.1	629	5	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_2	34.2819194328439	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAAAATAAATCAATTATG	3266	False	NA	NA	False	NA	NA	NA	170088430	170070476	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_170070653_170073135_170073346_170078508_170078584_170087115_170087249_170088395
H1_mix_00068876	chr4	-	315	1	FSM	ENSG00000181359.5	ENST00000506634.1	735	1	304	116	-162	-116	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTCAAAATCAGAAGAAGCT	NA	False	NA	NA	False	CATAAA	-20	NA	170605146	170604831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_170604800_170605100
H1_mix_00068878	chr4	-	615	5	FSM	ENSG00000164120.14	ENST00000512410.1	666	5	0	51	0	-51	multi-exon	FALSE	canonical	3	8	junction_1	1.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTTATCAGATCACATAA	-3	True	NA	NA	False	NA	NA	NA	174522432	174495411	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_174495625_174508695_174508793_174517970_174518078_174521943_174522068_174522358
H1_mix_00068904	chr4	-	7498	13	NIC	ENSG00000154556.18	novel	1790	12	NA	NA	0	-1032	combination_of_known_junctions	FALSE	canonical	3	20	junction_12	37.7435608930701	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAGCACTGCGAAGGTTA	1273	False	NA	33	True	NA	NA	NA	185811852	185639926	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_185646072_185646667_185646783_185649466_185649657_185651783_185651829_185652661_185652729_185657423_185657597_185662103_185662243_185678422_185678548_185678795_185678823_185684753_185684847_185690561_185690612_185775226_185775367_185811663
H1_mix_00068919	chr4	-	2347	2	Antisense	novelGene_ENSG00000164344.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	235	junction_1	0	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTAGTGGTCTCTTC	NA	False	NA	-1	True	ATTAAA	-22	NA	186247323	186241993	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_-_186242333_186245315
H1_mix_00068921	chr4	-	426	3	FSM	ENSG00000083857.15	ENST00000507662.1	428	3	2	0	2	0	multi-exon	FALSE	canonical	1	2	junction_1	96.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACGCACGGCTCCTATCA	7088	False	NA	NA	False	NA	NA	NA	186598125	186597110	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_186597272_186597681_186597793_186597971
H1_mix_00068924	chr4	+	2727	1	Antisense	novelGene_ENSG00000249592.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACCAGCCTGGGCAACATA	2378	False	NA	NA	False	NA	NA	NA	776725	779452	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_+_776700_779500
H1_mix_00068925	chr4	+	364	1	Intergenic	novelGene_1002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAGTTCAAGACCA	NA	False	NA	NA	False	NA	NA	NA	1706926	1707290	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_1706900_1707300
H1_mix_00068926	chr4	+	1646	1	Intergenic	novelGene_1006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCTAGAGATGTCCATGT	NA	False	NA	NA	False	NA	NA	NA	9066346	9067992	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_9066300_9068000
H1_mix_00068927	chr4	+	1154	1	Intergenic	novelGene_1007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGACTTCAAGCATCCAGAAC	NA	False	NA	NA	False	NA	NA	NA	9544389	9545543	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_9544400_9545500
H1_mix_00068928	chr4	+	762	1	Intergenic	novelGene_1017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGGGGAATTGTAAGGAGA	NA	False	NA	NA	False	NA	NA	NA	23723901	23724663	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_23723900_23724700
H1_mix_00068929	chr4	+	439	1	Intergenic	novelGene_1018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	546	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAGAAGGGGACGGGCTT	NA	False	NA	NA	False	NA	NA	NA	23724745	23725184	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_23724700_23725200
H1_mix_00068930	chr4	+	201	1	Intergenic	novelGene_1025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAGCAAAGGCAGGTTATG	3506	False	NA	NA	False	NA	NA	NA	24504819	24505020	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_24504800_24505000
H1_mix_00068931	chr4	+	7002	1	Intergenic	novelGene_1029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAATAGTACTGTTT	NA	False	NA	NA	False	NA	NA	NA	44398836	44405838	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_44398800_44405800
H1_mix_00068934	chr4	+	529	1	Intergenic	novelGene_1033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGATGTACCACAGTTT	NA	False	NA	NA	False	NA	NA	NA	61980306	61980835	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_61980300_61980800
H1_mix_00068935	chr4	+	297	1	Intergenic	novelGene_1036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	237	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAAGACTTCCCAAG	NA	False	NA	NA	False	NA	NA	NA	72898621	72898918	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_72898600_72898900
H1_mix_00068936	chr4	+	356	1	Intergenic	novelGene_1039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGGACATCTATGACACC	NA	False	NA	NA	False	NA	NA	NA	77548051	77548407	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_77548100_77548400
H1_mix_00068938	chr4	+	1162	1	Intergenic	novelGene_1041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGGAAATGCAGAAATCACC	NA	False	NA	NA	False	NA	NA	NA	78306627	78307789	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_78306600_78307800
H1_mix_00068939	chr4	+	554	1	Intergenic	novelGene_1046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGAGGAGAACGCAAAGGA	NA	False	NA	NA	False	NA	NA	NA	79556282	79556836	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_79556300_79556800
H1_mix_00068943	chr4	+	1442	1	Intergenic	novelGene_1085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTCAGCAATCCCACTGT	NA	False	NA	NA	False	TTTAAA	-23	NA	92958039	92959481	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_92958000_92959500
H1_mix_00068944	chr4	+	5447	1	Intergenic	novelGene_1087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTCAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	93145670	93151117	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_93145700_93151100
H1_mix_00068945	chr4	+	200	1	Intergenic	novelGene_1092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCGGTCTGAGGACCTGA	8349	False	NA	NA	False	AAAAAG	-44	NA	94298149	94298349	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_94298100_94298300
H1_mix_00068947	chr4	+	250	1	Intergenic	novelGene_1093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	503	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACGGAAATAGGCCCTTAAA	NA	False	NA	NA	False	NA	NA	NA	103556619	103556869	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_103556600_103556900
H1_mix_00068948	chr4	+	1162	1	Intergenic	novelGene_1099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTCCTTCCTTTATAAA	NA	False	NA	NA	False	AAAACA	-4	NA	120903048	120904210	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_120903000_120904200
H1_mix_00068952	chr4	+	2785	1	Intergenic	novelGene_1106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCAGGATCTATGCCTTA	NA	False	NA	NA	False	NA	NA	NA	130767705	130770490	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_130767700_130770500
H1_mix_00068953	chr4	+	247	1	Intergenic	novelGene_1109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTGTAATCTCAGCACT	NA	False	NA	NA	False	NA	NA	NA	136354228	136354475	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_136354200_136354500
H1_mix_00068955	chr4	+	238	1	Intergenic	novelGene_1112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGACCCCACTGGAAATCG	NA	False	NA	NA	False	NA	NA	NA	140215604	140215842	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_140215600_140215800
H1_mix_00068960	chr4	+	516	1	Intergenic	novelGene_1116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGAATTGTAAGGAGAGTT	NA	False	NA	NA	False	NA	NA	NA	152743459	152743975	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_152743500_152744000
H1_mix_00068961	chr4	+	864	1	Intergenic	novelGene_1119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGGCCCAGACTTCAT	8382	False	NA	NA	False	NA	NA	NA	156603250	156604114	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_156603200_156604100
H1_mix_00068963	chr4	+	1022	1	Intergenic	novelGene_1124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	230	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATTGGGACCTAGCTCG	NA	False	NA	NA	False	GATAAA	-33	NA	167438803	167439825	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_167438800_167439800
H1_mix_00068964	chr4	+	247	1	Intergenic	novelGene_1126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCTTGCCTTTGCTGGTG	NA	False	NA	NA	False	NA	NA	NA	175462637	175462884	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_175462600_175462900
H1_mix_00068967	chr4	+	3101	1	FSM	ENSG00000275426.1	ENST00000618815.1	580	1	-2114	-407	-2114	407	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGACATACTGATTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	147623	150724	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_147600_150700
H1_mix_00068968	chr4	+	7958	6	NNC	ENSG00000131127.14	novel	1611	5	NA	NA	-1257	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	37.259092849934	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATAAAATCTTGCTTTTG	NA	False	NA	2	True	GGGGCT	-31	NA	336556	383948	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_336929_337018_337987_343781_343909_344334_344431_372663_378205_383094
H1_mix_00068969	chr4	+	1988	4	FSM	ENSG00000131127.14	ENST00000505939.5	2146	4	-20	178	0	-178	multi-exon	FALSE	canonical	1	1	junction_3	38.3869190682914	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATACAACACCCTTAGCGG	6	True	NA	NA	False	NA	NA	NA	337813	384686	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_337987_343781_343909_344334_344431_383094
H1_mix_00068972	chr4	+	4502	8	NIC	ENSG00000174227.16	novel	3121	8	NA	NA	7	-404	intron_retention	FALSE	canonical	3	24	junction_1	35.5441662597682	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGATGAGGAGGGTGTCCG	7	True	NA	NA	False	NA	NA	NA	499249	524507	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_499726_500395_500602_505717_505928_507404_507594_508828_508971_515972_516186_521055_521274_521659
H1_mix_00068973	chr4	+	2555	8	ISM	ENSG00000174227.16	ENST00000506402.5	2387	9	-7	-6	-7	0	intron_retention	FALSE	canonical	3	22	junction_7	35.4913039075944	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTACTTTTGACTGCTTT	8	True	NA	25	True	AATAAA	-21	NA	499250	522843	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_499490_500395_500602_505717_505928_507404_507594_508828_508971_515972_516186_521055_521228_521659
H1_mix_00068974	chr4	+	2592	8	NNC	ENSG00000174227.16	novel	3121	8	NA	NA	0	0	intron_retention	FALSE	canonical	2	5	junction_7	40.4782632522489	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTACTTTTGACTGCTTT	46	True	NA	25	True	AATAAA	-21	NA	499288	522843	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_499490_500395_500602_505717_505928_507404_507594_508828_508971_515972_516186_521055_521303_521659
H1_mix_00068975	chr4	+	626	3	FSM	ENSG00000174227.16	ENST00000503261.5	626	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	7	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGCGCCTCTCTGCCGT	NA	False	NA	NA	False	NA	NA	NA	525364	533981	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_525635_527038_527231_533817
H1_mix_00068978	chr4	+	1695	10	NIC	ENSG00000127419.17	novel	1787	11	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	3	13	junction_6	15.1934033768883	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAATTGTTCTCCACTTT	-1	True	NA	6	True	NA	NA	NA	932461	958650	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_932541_947708_947893_948115_948155_950420_950519_951206_951259_951681_951718_953189_953355_955404_955484_955754_955891_957823
H1_mix_00068979	chr4	+	1025	7	FSM	ENSG00000090316.16	ENST00000509531.5	1001	7	-24	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	264.426423288849	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGCGCACGCCTCGGGG	-5	True	NA	NA	False	NA	NA	NA	1289889	1339179	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1289983_1311978_1312162_1315396_1315601_1332756_1332866_1336860_1336995_1338421_1338618_1339073
H1_mix_00068980	chr4	+	4819	5	FSM	ENSG00000163945.19	ENST00000503548.1	4819	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	21.5682057668226	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTGATTATCTTTCCAT	9957	False	NA	19	True	ATTAAA	-16	NA	1376033	1388049	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1376169_1380046_1380231_1380640_1380748_1380879_1380989_1383765
H1_mix_00068981	chr4	+	792	4	FSM	ENSG00000013810.21	ENST00000467746.6	792	4	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_2	295.977476620547	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCGAGGAAGAATGCAAAG	32	False	NA	NA	False	NA	NA	NA	1721534	1728058	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_1721644_1723420_1723584_1723701_1723871_1727707
H1_mix_00068984	chr4	+	1298	1	Genic_Genomic	ENSG00000063978.16	novel	NA	NA	NA	NA	-1043	-21815	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAACAGATGGTTTTCTTA	8821	False	NA	NA	False	TTTAAA	-3	NA	2467685	2468983	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr4_+_2467700_2469000
H1_mix_00068986	chr4	+	9211	13	FSM	ENSG00000087266.17	ENST00000356331.9	9211	13	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	38.3315216963214	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTCTCACTTGTGTTTG	47	False	NA	9	True	ATTAAA	-25	NA	2818813	2841098	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_2819071_2820613_2820754_2822934_2823038_2824612_2824731_2825125_2825197_2827229_2827319_2827605_2827675_2829492_2830148_2831570_2831680_2831922_2831979_2832330_2832413_2832989_2833050_2833696
H1_mix_00068987	chr4	+	4018	15	NIC	ENSG00000087274.19	novel	4743	18	NA	NA	10	0	intron_retention	FALSE	canonical	3	18	junction_1	278.76121740036	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTTGTCTAAATCTGGG	27	True	NA	14	True	AATAAA	-14	NA	2867884	2930062	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_2868130_2875895_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258_2899436_2904763_2905016_2907742_2907845_2908514_2908605_2914883_2915041_2926013_2926113_2928170
H1_mix_00068988	chr4	+	3527	2	FSM	ENSG00000249673.8	ENST00000507702.2	3301	2	0	-226	0	-179	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATCCCAGATGACACACCA	20	True	NA	NA	False	NA	NA	NA	2934939	2947494	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_2937845_2946872
H1_mix_00068989	chr4	+	232	3	FSM	ENSG00000125388.20	ENST00000504308.1	428	3	0	196	0	-196	multi-exon	FALSE	canonical	1	1	junction_2	0.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTGGGTGTTTCAAAGAC	NA	False	NA	NA	False	NA	NA	NA	3029322	3038382	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_3029410_3037373_3037512_3038375
H1_mix_00068990	chr4	+	259	2	FSM	ENSG00000286900.1	ENST00000668606.1	584	2	0	325	0	-325	multi-exon	FALSE	canonical	1	1	junction_1	0	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACCCTCAGGTTGGCTG	4577	False	NA	NA	False	NA	NA	NA	3450637	3452783	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_3450668_3452554
H1_mix_00068991	chr4	+	1305	3	Antisense	novelGene_ENSG00000284727.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAGTGACTTGTTATAC	6207	False	NA	13	True	AATAAA	-26	NA	4038105	4059745	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_+_4039013_4042060_4042150_4059436
H1_mix_00068992	chr4	+	2024	3	Antisense	novelGene_ENSG00000284727.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	7	junction_2	0.5	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGTCTCTGTGTCTGA	6207	False	NA	8	True	NA	NA	NA	4038105	4075223	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_+_4039013_4042060_4042150_4074195
H1_mix_00068993	chr4	+	2623	6	NIC	ENSG00000168826.16	novel	2886	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_4	7.72010362624751	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGTTTCCTCTAGCAT	18	True	NA	NA	False	AATAAA	-18	NA	4290268	4321783	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_4290353_4299926_4300098_4301988_4303092_4306137_4306185_4313040_4313115_4320639
H1_mix_00068994	chr4	+	1486	6	FSM	ENSG00000168824.15	ENST00000513829.5	1486	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	98.0542706872067	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTGCCCAGTGGACT	34	False	NA	12	True	AATAAA	-14	NA	4387038	4419058	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_4387174_4387603_4387759_4391474_4391592_4409572_4409684_4417234_4417928_4418783
H1_mix_00068995	chr4	+	3008	3	FSM	ENSG00000247708.8	ENST00000507244.6	3024	3	16	0	-3	0	multi-exon	FALSE	canonical	3	7	junction_2	7	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTCATGATGCATACAT	3	True	NA	NA	False	NA	NA	NA	4542158	4562914	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_4542476_4544737_4544908_4560393
H1_mix_00068996	chr4	+	3505	12	FSM	ENSG00000152953.13	ENST00000282908.10	3535	12	20	10	20	-9	multi-exon	FALSE	canonical	2	7	junction_10	3.06944418475166	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTGGACATTCCTTCT	-8	True	NA	3	True	AATAAA	-3	NA	5051499	5500979	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_5051916_5139904_5139961_5168298_5168451_5331219_5331394_5398206_5398245_5416844_5416935_5446672_5446777_5456806_5456924_5460102_5460229_5466702_5466835_5468005_5468071_5498944
H1_mix_00068997	chr4	+	1922	12	NNC	ENSG00000072840.13	novel	1960	12	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_11	25.6849957808924	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTTTGCGGCGCTTTGT	-7	True	NA	11	True	AATAAA	-19	NA	5711183	5758311	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_5711555_5719247_5719374_5729306_5729391_5731493_5731658_5733350_5733436_5741715_5741815_5745203_5745342_5748147_5748307_5752835_5753053_5753784_5753934_5756263_5756363_5758080
H1_mix_00068998	chr4	+	2013	7	FSM	ENSG00000109501.15	ENST00000673642.1	2013	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	75.5108527887806	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCGCTGACGGCTCGCGCA	123	False	NA	NA	False	NA	NA	NA	6277656	6302149	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_6277688_6287092_6287176_6288986_6289132_6291196_6291368_6291916_6291998_6295040_6295190_6300796
H1_mix_00068999	chr4	+	4314	20	NNC	ENSG00000013288.9	novel	5129	19	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	9.04650955783806	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTATGGTCTGTGAATT	13	True	NA	13	True	ATTAAA	-15	NA	6575203	6622401	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_6575349_6576577_6576725_6578392_6578499_6586995_6587169_6589044_6589161_6593172_6593351_6594533_6594733_6597112_6597304_6598197_6598355_6600622_6600757_6605054_6605330_6605950_6606112_6609106_6609299_6609797_6610051_6610879_6610991_6611085_6611279_6614217_6614356_6617379_6617493_6619926_6620045_6621187
H1_mix_00069000	chr4	+	6848	8	NIC	ENSG00000170871.12	novel	7771	9	NA	NA	22	-797	combination_of_known_splicesites	FALSE	canonical	2	10	junction_7	8.71779788708135	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGTTGTTTTTATTTC	25	True	NA	16	True	AATAAA	-13	NA	6782753	6883367	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_6782842_6824184_6824685_6842066_6842205_6857163_6857231_6858424_6858507_6860900_6864184_6871573_6871683_6880786
H1_mix_00069001	chr4	+	6151	27	FSM	ENSG00000184985.16	ENST00000507866.6	6152	27	1	0	1	0	multi-exon	TRUE	canonical	0	0	junction_1	1.00073937163521	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCCTTATTGTGAAGAT	-14	True	NA	7	True	ATTAAA	-15	NA	7192538	7742827	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_7193127_7396287_7396356_7531529_7531630_7638327_7638493_7654133_7654208_7661499_7661565_7664352_7664472_7667123_7667214_7676049_7676230_7682742_7682890_7689485_7689589_7697197_7697275_7703279_7703372_7704176_7704285_7712732_7712854_7714239_7714374_7715182_7715312_7718011_7718184_7723696_7723884_7725153_7725288_7726779_7726904_7728349_7728463_7729586_7729713_7733321_7733422_7734271_7734375_7737068_7737173_7740199
H1_mix_00069002	chr4	+	5119	12	NIC	ENSG00000155275.19	novel	2874	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_3	23.8864393217381	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGCCACTCTAAGTGGC	0	True	NA	18	True	AATAAA	-20	NA	8436139	8476555	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_8436400_8438791_8441442_8446475_8446591_8449668_8449889_8451959_8452029_8452881_8452990_8454741_8454814_8463984_8464092_8465377_8465562_8467913_8468347_8471083_8471201_8475771
H1_mix_00069003	chr4	+	4601	12	NIC	ENSG00000155275.19	novel	2874	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_11	29.3854408207773	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAAGCTCTTTATTGCAA	0	True	NA	21	True	AATAAA	-33	NA	8436139	8493531	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_8436400_8438791_8441442_8446475_8446591_8449668_8449889_8451959_8452029_8452881_8452990_8454741_8454814_8463984_8464092_8465377_8465562_8467913_8468347_8471083_8471201_8493265
H1_mix_00069005	chr4	+	2964	11	NNC	ENSG00000155275.19	novel	2874	11	NA	NA	-62	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_10	27.564469884255	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGCCACTCTAAGTGGC	108	False	NA	18	True	AATAAA	-20	NA	8440899	8476555	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_8441442_8446475_8446591_8449697_8449889_8451959_8452029_8452881_8452990_8454741_8454814_8463984_8464092_8465377_8465562_8467913_8468347_8471083_8471201_8475529
H1_mix_00069007	chr4	+	2249	11	NIC	ENSG00000109625.19	novel	2163	11	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_2	52.6373441579265	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCACTGGAATGAGAGGA	-1	True	NA	28	True	ATTAAA	-15	NA	8592776	8619749	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_8592922_8599452_8599587_8601122_8601498_8603975_8604189_8605988_8606186_8606736_8606899_8607266_8607426_8612026_8612163_8614358_8614499_8618428_8618529_8619261
H1_mix_00069008	chr4	+	669	2	Genic_Genomic	ENSG00000284636.1	novel	218	1	NA	NA	-139	6201	multi-exon	FALSE	canonical	2	11	junction_1	0	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATTTTTAATAATTATT	NA	False	NA	12	True	AATAAA	-26	NA	9000701	9007259	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr4_+_9001059_9006947
H1_mix_00069009	chr4	+	496	1	FSM	ENSG00000250942.1	ENST00000505915.1	627	1	40	91	40	-91	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGAGTTTCCAGAGCATT	NA	False	NA	NA	False	NA	NA	NA	9677347	9677843	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_9677300_9677800
H1_mix_00069010	chr4	+	2269	1	FSM	ENSG00000169676.6	ENST00000304374.4	2376	1	11	96	11	-96	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTCTTCTCTCTGTGCT	10	False	NA	NA	False	NA	NA	NA	9781644	9783913	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_9781600_9783900
H1_mix_00069011	chr4	+	808	1	FSM	ENSG00000205940.8	ENST00000507090.2	2176	1	656	712	656	-357	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGAGCAGGTTGCCAACT	751	False	NA	NA	False	NA	NA	NA	13337137	13337945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_13337100_13337900
H1_mix_00069016	chr4	+	765	5	FSM	ENSG00000109743.11	ENST00000514989.1	801	5	0	36	0	-31	multi-exon	FALSE	canonical	1	1	junction_4	3.20156211871642	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTCTAAACATTAAAGCCT	NA	False	NA	NA	False	NA	NA	NA	15715327	15738277	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_15715362_15715706_15715800_15718906_15718994_15722874_15722935_15737786
H1_mix_00069017	chr4	+	352	1	NIC	ENSG00000263327.6	novel	1031	3	NA	NA	29192	-156	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGCGAGAGAAAGCCGAGGG	NA	False	NA	NA	False	NA	NA	NA	16256236	16256588	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_16256200_16256600
H1_mix_00069018	chr4	+	811	4	FSM	ENSG00000163138.19	ENST00000502938.5	810	4	-1	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	13.0724477007517	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTACAATTTTGAGGTTT	2	True	NA	NA	False	ATTAAA	-13	NA	20700457	20727542	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_20700788_20704465_20704534_20704659_20704815_20727284
H1_mix_00069019	chr4	+	1045	3	Antisense	novelGene_ENSG00000237350.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	101.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAGCCTTCAGGTCACGG	NA	False	NA	NA	False	AATACA	-44	NA	22691269	22727493	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_+_22691297_22726413_22726479_22726540
H1_mix_00069020	chr4	+	1354	2	Intergenic	novelGene_1023	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAAGCTTCACAGACAGC	7	False	NA	NA	False	NA	NA	NA	24501320	24504372	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_24501574_24503271
H1_mix_00069021	chr4	+	1168	2	Intergenic	novelGene_1024	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAAGCTTCACAGACAGC	7	False	NA	NA	False	NA	NA	NA	24501320	24504372	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_24501574_24503457
H1_mix_00069022	chr4	+	2146	11	NIC	ENSG00000168228.16	novel	2797	13	NA	NA	21	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_6	40.1403786728526	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTATTCTTCAAGTACT	25	False	NA	3	True	NA	NA	NA	25312815	25370026	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_25312937_25314045_25314165_25315317_25315401_25333182_25333459_25333907_25333989_25345547_25345621_25361858_25361981_25362225_25362302_25364453_25364506_25365021_25365167_25369028
H1_mix_00069023	chr4	+	2665	28	NIC	ENSG00000053900.11	novel	2635	29	NA	NA	4	0	intron_retention	FALSE	canonical	3	277	junction_8	31.0101978889825	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTCATATTCTGCTTC	-12	True	NA	5	True	AATAAA	-12	NA	25377296	25418489	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_25377557_25380373_25380480_25383260_25383394_25388499_25388575_25388716_25388744_25388837_25388883_25390135_25390221_25390910_25391016_25392337_25392422_25393804_25393892_25394309_25394375_25394670_25394714_25394828_25394906_25396663_25396765_25396847_25396900_25402970_25403027_25405572_25405620_25406828_25406886_25407196_25407254_25409697_25409792_25413644_25413743_25414323_25414386_25414465_25414505_25414598_25414701_25415465_25415541_25416424_25416599_25417615_25417740_25418154
H1_mix_00069024	chr4	+	4541	13	Fusion	ENSG00000242640.1_ENSG00000157765.13	novel	549	5	NA	NA	-47	93	multi-exon	FALSE	canonical	1	1	junction_1	6.40475084084723	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAACGAACAAAAAAAAAT	89	False	NA	NA	False	AATAAA	-18	NA	25655253	25679113	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr4_+_25655358_25662497_25662613_25662707_25662843_25664201_25664331_25666127_25666272_25667879_25667992_25669646_25669843_25670737_25670834_25671600_25671722_25673086_25673255_25674295_25674413_25674504_25674630_25676134
H1_mix_00069027	chr4	+	1059	2	FSM	ENSG00000109689.19	ENST00000478425.1	407	2	-668	16	-21	-16	multi-exon	FALSE	canonical	3	8	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTTGTTTAAAGAATCCT	NA	False	NA	11	True	ACTAAA	-3	NA	26857579	26858903	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_26858348_26858612
H1_mix_00069028	chr4	+	1477	6	FSM	ENSG00000251129.3	ENST00000665582.2	1513	6	22	14	16	-14	multi-exon	FALSE	canonical	0	0	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTATTAATATAATTTTCT	21	False	NA	NA	False	AATAAA	-19	NA	31997400	32228529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_31997823_32146052_32146268_32155313_32155407_32157955_32158082_32225023_32225122_32228006
H1_mix_00069029	chr4	+	940	3	ISM	ENSG00000197712.12	ENST00000358869.5	4060	15	-230	67137	-101	-13193	5prime_fragment	FALSE	canonical	3	8	junction_2	3	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGCATTTTGATAAGTG	NA	False	NA	5	True	TATAAA	-16	NA	38867575	38878602	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_38867835_38868397_38868547_38878070
H1_mix_00069030	chr4	+	909	5	FSM	ENSG00000109790.18	ENST00000515612.1	909	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	74.8665479369792	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTAACTAGAATTTTTA	NA	False	NA	NA	False	NA	NA	NA	39103314	39126857	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_39103512_39107568_39107732_39113019_39113233_39115158_39115331_39126693
H1_mix_00069031	chr4	+	6053	35	NIC	ENSG00000157796.18	novel	4395	37	NA	NA	-4	0	intron_retention	TRUE	canonical	2	15	junction_4	13.607447584238	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTGTGACGTTTTTCTG	-20	True	NA	12	True	AATAAA	-13	NA	39182499	39285809	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_39182564_39185725_39185818_39186538_39186605_39189655_39189782_39199477_39199594_39203641_39203723_39205153_39205267_39205562_39205737_39214600_39214672_39215840_39216014_39216095_39216211_39217133_39217241_39217982_39218106_39224883_39225034_39228209_39228358_39228485_39228691_39231796_39231957_39232161_39232273_39234765_39234876_39240276_39240335_39244247_39244389_39244469_39244553_39245368_39245453_39253145_39253293_39253905_39254031_39255847_39255961_39257485_39257555_39266062_39266141_39267994_39268092_39269975_39270101_39272979_39274959_39277019_39277144_39278130_39278208_39278538_39278664_39285486
H1_mix_00069035	chr4	+	589	5	FSM	ENSG00000078140.14	ENST00000510934.5	589	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	479.15915936148	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATCATGGGATGTAGAG	NA	False	NA	NA	False	NA	NA	NA	39698108	39778384	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_39698391_39737419_39737514_39745751_39745811_39777681_39777811_39778359
H1_mix_00069036	chr4	+	317	1	FSM	ENSG00000252970.1	ENST00000517161.1	103	1	-259	45	-259	-45	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTGGATGGTAGATCAC	NA	False	NA	NA	False	TATAAA	-39	NA	39936493	39936810	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_39936500_39936800
H1_mix_00069037	chr4	+	6259	18	NNC	ENSG00000078177.14	novel	9720	18	NA	NA	-229	1	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_1	37.0086495080313	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGTGTGAGGAAATCCTT	454	False	NA	15	True	AATAAA	-16	NA	40056620	40158253	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_40057031_40097226_40097570_40102074_40103219_40106899_40107025_40112083_40112173_40113431_40113509_40117868_40118025_40119931_40122310_40123126_40123213_40124159_40124206_40126133_40126331_40131800_40131920_40136943_40137083_40142672_40142862_40144631_40144801_40152779_40152904_40154191_40154268_40157861
H1_mix_00069038	chr4	+	9279	16	NIC	ENSG00000078177.14	novel	9720	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	30.989890824805	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCAGTGTGAGGAAATCC	-15	True	NA	13	True	AATAAA	-14	NA	40056849	40158251	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_40057031_40102074_40103219_40106899_40107025_40112083_40112173_40113431_40113509_40117868_40118025_40119931_40122310_40123126_40123213_40124159_40124206_40126133_40126331_40131800_40131920_40136943_40137083_40142672_40142862_40144631_40144801_40152779_40152904_40154191
H1_mix_00069039	chr4	+	9856	20	NNC	ENSG00000078177.14	novel	9747	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_3	42.1117758121153	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCAGTGTGAGGAAATCC	48	True	NA	13	True	AATAAA	-14	NA	40056912	40158251	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_40057031_40073454_40073552_40080370_40080480_40097226_40097570_40100035_40100127_40102074_40103219_40106899_40107025_40112083_40112173_40113431_40113509_40117868_40118025_40119931_40122310_40123126_40123213_40124159_40124206_40126133_40126331_40131800_40131920_40136943_40137083_40142672_40142862_40144631_40144801_40152779_40152904_40154191
H1_mix_00069040	chr4	+	9845	20	NNC	ENSG00000078177.14	novel	9747	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	39.6646608274867	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCAGTGTGAGGAAATCC	48	True	NA	13	True	AATAAA	-14	NA	40056912	40158251	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_40057031_40073454_40073552_40080370_40080480_40095530_40095611_40097226_40097570_40102074_40103219_40106899_40107025_40112083_40112173_40113431_40113509_40117868_40118025_40119931_40122310_40123126_40123213_40124159_40124206_40126133_40126331_40131800_40131920_40136943_40137083_40142672_40142862_40144631_40144801_40152779_40152904_40154191
H1_mix_00069041	chr4	+	2144	4	FSM	ENSG00000168421.13	ENST00000610353.4	2268	4	124	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13.6707311029399	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAATGGCAACAGAACTT	-15	True	NA	NA	False	NA	NA	NA	40197030	40244764	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_40197301_40235192_40235359_40242713_40242835_40243177
H1_mix_00069042	chr4	+	622	3	FSM	ENSG00000174343.6	ENST00000502377.1	622	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGGTGAATCTGTTGGAC	1532	False	NA	NA	False	NA	NA	NA	40337285	40348139	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_40337365_40338051_40338242_40347786
H1_mix_00069043	chr4	+	220	2	Intergenic	novelGene_1027	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCGGCCACAAATCCCAG	NA	False	NA	NA	False	NA	NA	NA	40691457	40705103	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_40691483_40704908
H1_mix_00069044	chr4	+	1235	5	NIC	ENSG00000179299.17	novel	1759	6	NA	NA	47	-346	combination_of_known_splicesites	FALSE	canonical	3	12	junction_3	92.8880374429345	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGTGCATCTGGTTGGCG	16	False	NA	6	True	AATAAA	-16	NA	40750010	40775110	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_40750301_40750602_40750992_40760433_40760493_40774264_40774418_40774766
H1_mix_00069045	chr4	+	1731	8	NNC	ENSG00000179299.17	novel	3546	11	NA	NA	252	10383	at_least_one_novel_splicesite	TRUE	canonical	3	9	junction_7	76.1571951121293	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTTGCCTTGTGGAAG	20	True	NA	21	True	ATTAAA	-31	NA	40750215	40786859	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_40750301_40750602_40750992_40760433_40760493_40761170_40761302_40774264_40774418_40774766_40774951_40776048_40776260_40786340
H1_mix_00069047	chr4	+	2090	2	Antisense	novelGene_ENSG00000163697.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGCAGATCACGAGGTCAG	NA	False	NA	NA	False	NA	NA	NA	40877148	40894058	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_+_40879187_40894006
H1_mix_00069048	chr4	+	827	8	FSM	ENSG00000154277.13	ENST00000508768.5	827	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	1020.47129967941	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCACAGCTGTCCACTGG	10	False	NA	102	True	NA	NA	NA	41256939	41268239	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_41257010_41257114_41257127_41257608_41257738_41260646_41260798_41261714_41261801_41263224_41263292_41264102_41264162_41267986
H1_mix_00069049	chr4	+	5764	21	FSM	ENSG00000064042.18	ENST00000396595.7	5740	21	-24	0	-24	0	multi-exon	FALSE	canonical	1	2	junction_3	7.05974503788912	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGTATTCCATTAATTA	4	True	NA	2	True	AATAAA	-13	NA	41612877	41700043	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_41613099_41613465_41613662_41619187_41619441_41638931_41638968_41644499_41644627_41646122_41646281_41646484_41646894_41650392_41650609_41661419_41661511_41662820_41662985_41666560_41666667_41671553_41671595_41676381_41676463_41680005_41680099_41680954_41681060_41682332_41682461_41684396_41684519_41685709_41685831_41689526_41689636_41692281_41692385_41697159
H1_mix_00069050	chr4	+	4078	16	NIC	ENSG00000151806.14	novel	4460	17	NA	NA	0	-13	combination_of_known_junctions	FALSE	canonical	3	13	junction_14	66.5727338246589	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTCTAAACTGACTTGAG	-27	True	NA	-4	True	NA	NA	NA	44678419	44700666	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_44678788_44680440_44680553_44680693_44680843_44681122_44681204_44682333_44682412_44683234_44683319_44685958_44686024_44686509_44686714_44688006_44688147_44689285_44689410_44689842_44689976_44690716_44690861_44691665_44691800_44694411_44694514_44697407_44697445_44698543
H1_mix_00069051	chr4	+	2203	15	NIC	ENSG00000151806.14	novel	4460	17	NA	NA	27	-1722	combination_of_known_splicesites	FALSE	canonical	3	35	junction_1	81.1457494454344	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAAGTTGTTGTTGTGAAG	7	True	NA	12	True	AGTAAA	-23	NA	44678453	44698957	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_44678788_44680693_44680843_44681122_44681204_44682333_44682412_44683234_44683319_44685958_44686024_44686509_44686714_44689285_44689410_44689842_44689976_44690716_44690861_44691665_44691800_44694411_44694514_44695614_44695735_44697407_44697445_44698543
H1_mix_00069052	chr4	+	5480	8	NIC	ENSG00000109171.15	novel	6081	8	NA	NA	0	-79	intron_retention	FALSE	canonical	3	14	junction_5	85.930916723724	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAAGTGGAAGGGTAGAA	NA	False	NA	-62	True	NA	NA	NA	48369848	48426122	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_48369998_48377895_48378061_48379689_48379849_48382567_48382928_48383646_48383785_48394575_48394654_48420124_48420444_48422010
H1_mix_00069054	chr4	+	627	1	FSM	ENSG00000272576.1	ENST00000610270.1	610	1	-81	64	-81	-64	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGACAAGGTTTGTAATCC	3848	False	NA	-62	True	NA	NA	NA	51918690	51919317	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_51918700_51919300
H1_mix_00069055	chr4	+	3447	3	NNC	ENSG00000248866.1	novel	1048	2	NA	NA	93	2661	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCCTAATACAATAGCCTAA	57	False	NA	NA	False	TATAAA	-41	NA	52659498	52664329	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_52659677_52660891_52662361_52662529
H1_mix_00069056	chr4	+	1948	2	FSM	ENSG00000250302.3	ENST00000653034.1	1948	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTACCCCAAGCTACTT	NA	False	NA	NA	False	ATTAAA	-10	NA	52750882	52753440	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_52751424_52752033
H1_mix_00069058	chr4	+	1871	16	NIC	ENSG00000145216.16	novel	3396	18	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_14	128.536825678696	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTGTACTATTTC	6	True	NA	29	True	AATAAA	-30	NA	53377665	53459621	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_53377924_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53391429_53391499_53399729_53399840_53414614_53414723_53425871_53425966_53428026_53428184_53442652_53442708_53444047_53444104_53458652_53458791_53459301
H1_mix_00069059	chr4	+	2050	17	NIC	ENSG00000145216.16	novel	3396	18	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	179	junction_1	103.342800305585	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTGTACTATTTC	17	True	NA	29	True	AATAAA	-30	NA	53377676	53459621	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_53377924_53379072_53379118_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53399729_53399840_53414614_53414723_53425871_53425966_53428026_53428184_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
H1_mix_00069060	chr4	+	2043	16	NNC	ENSG00000145216.16	novel	3396	18	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_7	122.754207893479	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATATCCAAGAAAGGAATG	17	True	NA	73	True	AATAAA	-16	NA	53377676	53459665	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_53377924_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53399735_53399840_53414614_53414723_53425871_53425966_53428026_53428184_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
H1_mix_00069063	chr4	+	6368	23	FSM	ENSG00000134853.12	ENST00000257290.10	6378	23	10	0	-8	0	multi-exon	FALSE	canonical	2	3	junction_4	6.57333079085104	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAAGGTTTCAGCATTTT	18	True	NA	8	True	AATAAA	-21	NA	54229302	54298245	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_54229416_54258756_54258818_54261094_54261413_54263666_54263928_54264918_54265050_54267288_54267461_54267551_54267742_54270632_54270749_54272393_54272521_54273536_54273731_54274530_54274626_54274840_54274974_54277387_54277493_54277895_54278007_54278361_54278516_54280315_54280483_54285370_54285487_54285840_54285964_54287429_54287542_54288798_54288899_54289008_54289115_54290312_54290555_54295124
H1_mix_00069064	chr4	+	5209	21	FSM	ENSG00000157404.17	ENST00000687109.1	5249	21	-15	55	9	0	multi-exon	FALSE	canonical	3	38	junction_4	107.648258230219	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGTCATTTGATTGTTG	96	False	NA	15	True	AATAAA	-20	NA	54657897	54740715	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_54658082_54695511_54695782_54698283_54698566_54699629_54699767_54703720_54703893_54707097_54707288_54709423_54709540_54723583_54723699_54725856_54726051_54727217_54727325_54727415_54727543_54727822_54727928_54728010_54728122_54729334_54729486_54731327_54731420_54731870_54731999_54733069_54733193_54736497_54736610_54736720_54736821_54737174_54737281_54738428
H1_mix_00069066	chr4	+	225	1	FSM	ENSG00000239040.1	ENST00000459077.1	103	1	-152	30	-152	-30	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCACTGCTTCACTTTA	8723	False	NA	NA	False	NA	NA	NA	55412483	55412708	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_55412500_55412700
H1_mix_00069067	chr4	+	880	1	FSM	ENSG00000242083.2	ENST00000470544.2	798	1	-65	-17	-65	17	mono-exon	FALSE	NA	NA	NA	NA	NA	182	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTGTAAATAAAAATAATTA	NA	False	NA	NA	False	ACTAAA	-28	NA	56356069	56356949	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_56356100_56356900
H1_mix_00069068	chr4	+	778	1	FSM	ENSG00000269921.1	ENST00000602927.1	529	1	-91	-158	-91	158	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGCAAAAAATATCTCCAC	15	False	NA	NA	False	AAGAAA	-15	NA	56387533	56388311	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_56387500_56388300
H1_mix_00069069	chr4	+	392	1	FSM	ENSG00000270147.1	ENST00000602749.1	560	1	139	29	139	-29	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGGTAATAAATTATTCT	8932	False	NA	NA	False	AATACA	-37	NA	56396450	56396842	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_56396400_56396800
H1_mix_00069071	chr4	+	7298	5	NNC	ENSG00000084093.19	novel	7165	5	NA	NA	-35	0	intron_retention	TRUE	canonical	1	1	junction_4	140.391194524443	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAATAAAGTTTTAAAAAC	NA	False	NA	-13	True	NA	NA	NA	56907840	56935822	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_56908214_56910629_56911537_56919786_56919871_56929840_56931121_56931168
H1_mix_00069073	chr4	+	3666	24	FSM	ENSG00000047315.17	ENST00000431623.6	3666	24	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	117.918894942664	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTGTGATCTTTATTT	-1	True	NA	32	True	AATAAA	-16	NA	56978863	57031158	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_56979005_56986353_56986427_56994403_56994517_56994646_56994867_56995250_56995410_56999616_56999782_57005245_57005443_57005599_57005720_57006815_57007003_57010360_57010505_57010747_57010888_57010988_57011101_57015501_57015657_57017042_57017242_57017559_57017729_57020898_57020996_57022151_57022247_57023329_57023581_57023661_57023752_57024004_57024113_57024885_57025000_57025376_57025538_57030203_57030400_57030898
H1_mix_00069074	chr4	+	949	2	Genic_Genomic	ENSG00000243199.1	novel	870	1	NA	NA	-10	85032	multi-exon	FALSE	non_canonical	0	0	junction_1	0	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGGTAAAGCATAGATG	8	False	NA	NA	False	AAAACA	-1	NA	65573448	65659360	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr4_+_65574360_65659322
H1_mix_00069075	chr4	+	366	2	FSM	ENSG00000250846.6	ENST00000514260.1	422	2	56	0	-23	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGATTTAGTCATCTCTG	995	False	NA	NA	False	AATAAA	-18	NA	65670585	65693386	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_65670674_65693108
H1_mix_00069076	chr4	+	471	1	FSM	ENSG00000250030.2	ENST00000508720.2	308	1	-170	7	-170	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTGATGTAAGTGGGAA	71	False	NA	NA	False	TTTAAA	-3	NA	67446096	67446567	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_67446100_67446600
H1_mix_00069077	chr4	+	389	3	FSM	ENSG00000248049.8	ENST00000693410.1	477	3	88	0	11	0	multi-exon	FALSE	canonical	3	23	junction_2	6.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTATGGTATTTTAATTAT	3	True	NA	11	True	ATTAAA	-21	NA	67701371	67730202	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_67701485_67728539_67728687_67730073
H1_mix_00069078	chr4	+	204	1	FSM	ENSG00000162840.4	ENST00000262499.5	183	1	-33	12	-33	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGTGCCTGATGCTG	42	False	NA	NA	False	NA	NA	NA	68376289	68376493	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_68376300_68376500
H1_mix_00069079	chr4	+	5225	11	NNC	ENSG00000087128.10	novel	794	6	NA	NA	-41185	2942	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	6.03655530911463	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTGTGTGGACATAAGT	NA	False	NA	17	True	AATAAA	-25	NA	68406277	68500546	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_68406386_68436128_68436243_68461820_68461946_68466630_68466753_68468878_68468947_68471459_68471624_68474722_68474762_68476260_68476439_68477368_68477629_68478848_68478992_68496642
H1_mix_00069080	chr4	+	207	1	FSM	ENSG00000207448.1	ENST00000384717.1	104	1	-200	97	-200	-97	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCAGCAGCACATATACTA	NA	False	NA	NA	False	CATAAA	-43	NA	70701554	70701761	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_70701600_70701800
H1_mix_00069081	chr4	+	4137	16	NIC	ENSG00000018189.13	novel	2143	12	NA	NA	-95	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	40.0829140657213	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTGATTGATGATTGT	1	True	NA	18	True	AATAAA	-20	NA	70704705	70808619	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_70705295_70762518_70762693_70763551_70763670_70764474_70764577_70768537_70768662_70773510_70773573_70775167_70775234_70778368_70778439_70783090_70783184_70784795_70784880_70788805_70788974_70789494_70789593_70793784_70793905_70794794_70794895_70800140_70800206_70806515
H1_mix_00069082	chr4	+	4896	18	NIC	ENSG00000018189.13	novel	2143	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_12	37.3443714115604	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAATTTTGCTCATTTTCT	34	True	NA	-40	True	NA	NA	NA	70704800	70806816	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_70705295_70762518_70762693_70763551_70763670_70764474_70764577_70768537_70768662_70773510_70773573_70775167_70775234_70778368_70778439_70783090_70783184_70784795_70784880_70788805_70788974_70789494_70789593_70791224_70793905_70794794_70794895_70800140_70800206_70802955_70802984_70804347_70804417_70806515
H1_mix_00069085	chr4	+	1597	4	FSM	ENSG00000056291.19	ENST00000308744.12	1964	4	116	251	116	-4	multi-exon	FALSE	canonical	0	0	junction_1	1.63299316185545	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGTTTACAAAGCCTCAT	18	False	NA	NA	False	AATAAA	-14	NA	72032115	72148054	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_72032201_72128584_72128920_72138039_72138140_72146977
H1_mix_00069086	chr4	+	582	4	NNC	ENSG00000081051.8	novel	476	4	NA	NA	-242	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	38.0292285252044	22	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCCTTATCACAGAAATAA	2502	False	NA	-28	True	GATAAA	-16	NA	73453247	73455741	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_73453531_73453764_73453898_73455235_73455291_73455630
H1_mix_00069087	chr4	+	601	3	FSM	ENSG00000109272.4	ENST00000226524.4	743	3	136	6	136	-6	multi-exon	FALSE	canonical	0	0	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTACTCGACAGCTTTTT	118	False	NA	NA	False	AATAAA	-17	NA	73853431	73854477	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_73853463_73853782_73853910_73854034
H1_mix_00069088	chr4	+	1208	5	FSM	ENSG00000174796.12	ENST00000514480.1	1161	5	-47	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	23.0705439901187	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTTCATGTTACGTTC	0	True	NA	NA	False	NA	NA	NA	75514472	75527214	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_75514992_75515432_75515533_75516771_75516980_75521735_75521862_75526959
H1_mix_00069089	chr4	+	1463	3	FSM	ENSG00000272414.6	ENST00000514365.5	1465	3	2	0	1	0	multi-exon	FALSE	canonical	1	2	junction_2	3.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTCAAGCTTGAGCCTTT	14	True	NA	NA	False	AAAACA	-16	NA	76251733	76310379	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_76251821_76263703_76263844_76309143
H1_mix_00069090	chr4	+	578	4	FSM	ENSG00000138764.15	ENST00000512918.5	578	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	58.6420402858639	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCACTTATACCATACTA	99	False	NA	-36	True	NA	NA	NA	77158355	77160926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_77158452_77158532_77158671_77159366_77159505_77160720
H1_mix_00069091	chr4	+	16113	74	NNC	ENSG00000138759.20	novel	15871	74	NA	NA	-365	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_38	46.5684120548851	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGTTTTCCTATGTT	NA	False	NA	25	True	AATAAA	-19	NA	78056957	78544269	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_78058086_78065984_78066017_78237509_78237618_78245232_78245326_78252391_78252552_78255241_78255376_78265024_78265109_78266833_78266936_78267240_78267433_78278654_78278745_78281397_78281434_78282819_78282968_78284404_78284549_78286404_78286540_78308065_78308210_78315593_78315735_78317367_78317509_78318809_78318987_78333271_78333413_78337673_78337818_78363512_78363666_78363907_78364055_78369837_78369985_78372717_78372859_78374110_78374252_78375738_78375880_78379725_78379997_78384058_78384144_78387374_78387702_78400733_78400888_78407662_78407842_78412968_78413086_78418948_78419064_78421862_78422001_78424387_78424421_78429094_78429227_78430291_78430418_78432356_78432482_78438569_78438719_78438901_78439065_78441161_78441298_78445521_78445713_78446726_78446881_78448052_78448317_78450150_78450340_78451771_78451892_78452174_78452355_78464020_78464146_78464442_78464584_78466207_78466436_78469977_78470092_78472179_78472331_78473437_78473598_78475437_78475607_78477814_78478062_78479373_78479719_78481803_78481965_78482387_78482536_78488874_78489081_78496804_78496962_78499720_78499922_78507420_78507609_78508730_78509007_78511273_78511507_78513391_78513553_78515798_78516014_78519330_78519482_78521522_78521631_78522648_78522809_78526540_78526658_78534448_78534616_78536994_78537201_78539293_78539441_78540530
H1_mix_00069092	chr4	+	2449	3	NIC	ENSG00000138759.20	novel	2297	4	NA	NA	35	43	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	35	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCATGGGAGTGTTATC	19	True	NA	NA	False	ATTAAA	-17	NA	78057357	78072150	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_78058086_78065984_78066017_78070461
H1_mix_00069093	chr4	+	6067	43	ISM	ENSG00000138759.20	ENST00000684159.1	7266	45	711	3494	344	328	5prime_fragment	FALSE	canonical	3	30	junction_26	14.8035702318724	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTCTTTTCTTGTATAT	430	False	NA	NA	False	AATAAA	-19	NA	78058033	78446961	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_78058086_78065984_78066017_78237509_78237618_78245232_78245326_78252391_78252552_78255241_78255376_78265024_78265109_78266833_78266936_78267240_78267433_78278654_78278745_78281397_78281434_78282819_78282968_78284404_78284549_78286404_78286540_78308065_78308210_78315593_78315735_78317367_78317509_78318809_78318987_78333271_78333413_78337673_78337818_78363512_78363666_78363907_78364055_78369837_78369985_78372717_78372859_78374110_78374252_78375738_78375880_78379725_78379997_78384058_78384144_78387374_78387702_78400733_78400888_78407662_78407842_78412968_78413086_78418948_78419064_78421862_78422001_78424387_78424421_78429094_78429227_78430291_78430418_78432356_78432605_78438569_78438719_78438901_78439065_78441161_78441298_78445521_78445713_78446726
H1_mix_00069094	chr4	+	1335	12	FSM	ENSG00000138772.13	ENST00000512884.5	1335	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	82.084314645027	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGATAATAAAAATTGTTG	-29	True	NA	-6	True	ATTAAA	-8	NA	78551746	78610415	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_78551860_78554435_78554489_78579026_78579122_78582176_78582291_78586259_78586351_78591543_78591624_78595380_78595438_78595793_78595888_78597318_78597415_78601509_78601569_78604276_78604400_78610055
H1_mix_00069095	chr4	+	3068	5	FSM	ENSG00000180769.10	ENST00000652652.2	3132	5	86	-22	86	0	multi-exon	FALSE	canonical	2	3	junction_4	4.06201920231798	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCACATACTTTCTCTACT	87	False	NA	-8	True	AATAAA	-2	NA	84967102	85008729	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_84967128_84969724_84969877_85000690_85000766_85004229_85004328_85006011
H1_mix_00069096	chr4	+	8086	47	NIC	ENSG00000163629.13	novel	8573	48	NA	NA	-12	-3	combination_of_known_junctions	FALSE	canonical	3	27	junction_24	70.7252732211882	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAACAAGCCAAAACTGTG	371	False	NA	8	True	AATAAA	-16	NA	86594719	86815146	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_86594790_86635251_86635372_86672364_86672544_86686709_86686776_86689004_86689191_86693586_86693675_86701240_86701802_86716529_86716626_86717023_86717118_86722211_86722435_86732399_86732475_86732591_86732767_86734302_86734457_86734736_86734876_86735593_86735747_86741633_86741817_86744965_86745129_86750469_86750888_86751026_86751125_86758259_86758350_86758677_86758786_86758941_86759074_86762726_86763191_86764592_86764740_86765394_86765489_86766431_86766518_86767816_86767977_86769768_86769984_86770100_86770200_86771170_86771536_86772777_86772959_86774372_86774532_86775170_86775343_86775441_86775653_86780401_86780473_86782200_86782263_86784464_86784559_86785230_86785369_86785847_86785937_86796873_86796930_86799100_86799205_86803708_86803858_86805278_86805370_86807559_86807898_86809768_86809985_86811045_86811109_86814455
H1_mix_00069097	chr4	+	7546	45	FSM	ENSG00000163629.13	ENST00000316707.10	7546	45	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_17	70.7684356729984	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGCCAAAACTGTGTGC	383	False	NA	11	True	AATAAA	-19	NA	86594731	86815149	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_86594790_86635251_86635372_86672364_86672544_86686709_86686776_86689004_86689191_86693586_86693675_86701240_86701802_86716529_86716626_86717023_86717118_86722211_86722435_86732399_86732475_86732591_86732767_86734302_86734457_86734736_86734876_86735593_86735747_86741633_86741817_86744965_86745129_86758259_86758350_86758677_86758786_86758941_86759074_86762726_86763191_86764592_86764725_86765394_86765489_86766431_86766518_86767816_86767977_86769768_86769984_86770100_86770200_86771170_86771536_86772777_86772959_86774372_86774532_86775170_86775343_86775441_86775653_86780401_86780473_86782200_86782263_86784464_86784559_86785230_86785369_86785847_86785937_86796873_86796930_86799100_86799205_86803708_86803858_86805278_86805370_86807559_86807898_86809768_86809985_86811045_86811109_86814455
H1_mix_00069098	chr4	+	2613	3	NNC	ENSG00000172493.23	novel	1668	3	NA	NA	-2	16708	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	40	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGTTTGGGTGGAAAAT	-7	True	NA	5	True	AATAAA	-17	NA	86935040	86990776	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_86935241_86948497_86948572_86988437
H1_mix_00069099	chr4	+	5607	1	NIC	ENSG00000172493.23	novel	9261	21	NA	NA	20490	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGGTTGAATCCATGCTT	9151	False	NA	11	True	AATAAA	-16	NA	87135432	87141039	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_87135400_87141000
H1_mix_00069100	chr4	+	902	2	Intergenic	novelGene_1058	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	114	junction_1	0	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGACCTGGTGTCTGCCTC	NA	False	NA	29	True	AATAAA	-30	NA	87922158	87927383	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_87922401_87926723
H1_mix_00069101	chr4	+	982	3	Intergenic	novelGene_1062	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	195	junction_2	37.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGACCTGGTGTCTGCCT	NA	False	NA	28	True	AATAAA	-29	NA	87922160	87927382	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_87922401_87924311_87924395_87926723
H1_mix_00069102	chr4	+	1165	3	Intergenic	novelGene_1063	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	195	junction_2	321	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGACCTGGTGTCTGCCTC	NA	False	NA	29	True	AATAAA	-30	NA	87922160	87927383	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_87922401_87924129_87924395_87926723
H1_mix_00069103	chr4	+	4285	4	Intergenic	novelGene_1068	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	161	junction_1	371.204346238924	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTTTCATTTCATTCTTG	NA	False	NA	17	True	AATAAA	-23	NA	87922160	87934278	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_87922401_87923543_87924395_87926696_87926987_87931374
H1_mix_00069104	chr4	+	1031	3	Intergenic	novelGene_1070	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	195	junction_2	21.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGACCTGGTGTCTGCCT	NA	False	NA	28	True	AATAAA	-29	NA	87922164	87927382	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_87922401_87924258_87924395_87926723
H1_mix_00069105	chr4	+	2594	4	Intergenic	novelGene_1071	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	161	junction_1	232.346006349725	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTAAGGTTGTTCATTG	NA	False	NA	20	True	AATAAA	-20	NA	87922166	87932620	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_87922401_87923543_87924395_87926723_87926987_87931374
H1_mix_00069106	chr4	+	5958	1	Intergenic	novelGene_1073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTCTTTCTCTTCTTAT	5661	False	NA	21	True	AATAAA	-18	NA	87937547	87943505	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_87937500_87943500
H1_mix_00069107	chr4	+	334	1	FSM	ENSG00000241853.1	ENST00000471148.1	389	1	94	-39	94	39	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTATATATTTTTTTTAA	NA	False	NA	NA	False	TATAAA	-5	NA	88163672	88164006	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_88163700_88164000
H1_mix_00069108	chr4	+	2835	23	NIC	ENSG00000138642.16	novel	3776	23	NA	NA	-30	-795	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	10.6967980070349	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAACTTTCAGTGAAAGA	-13	True	NA	NA	False	NA	NA	NA	88379033	88442302	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_88379121_88383184_88383381_88385498_88385576_88390651_88390880_88393487_88393583_88396014_88396143_88396850_88396988_88398141_88398210_88404875_88404998_88405553_88405614_88408523_88408618_88413076_88413267_88417424_88417580_88423859_88423974_88424594_88424703_88428579_88428751_88431161_88431306_88435724_88435892_88436904_88436972_88437710_88437782_88439873_88440058_88440147_88440251_88442233
H1_mix_00069109	chr4	+	2433	2	FSM	ENSG00000251095.8	ENST00000612706.1	2422	2	-11	0	7	0	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCATTTTCATATCTGGC	7	False	NA	NA	False	CATAAA	-16	NA	89681511	89686704	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_89681685_89684444
H1_mix_00069110	chr4	+	266	1	FSM	ENSG00000274238.1	ENST00000610572.1	514	1	273	-25	273	25	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTATTTGCTTTATACCC	NA	False	NA	NA	False	AAAACA	-42	NA	89744064	89744330	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_89744100_89744300
H1_mix_00069111	chr4	+	913	2	Intergenic	novelGene_1079	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	0	62	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTGTTTGGTGGTCTCT	NA	False	NA	NA	False	AATAAA	-20	NA	91623748	91629661	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_91624238_91629237
H1_mix_00069112	chr4	+	486	2	Intergenic	novelGene_1084	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGCAACATAATAAATGACAA	NA	False	NA	NA	False	TTTAAA	-22	NA	92438992	92444728	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_92439354_92444603
H1_mix_00069113	chr4	+	6993	16	NNC	ENSG00000152208.13	novel	4844	14	NA	NA	135652	0	at_least_one_novel_splicesite	FALSE	canonical	3	190	junction_15	19.9866622192568	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGCTCTCATACTATT	NA	False	NA	9	True	AATAAA	-11	NA	92440308	93774553	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_92442311_92590130_92590287_93084994_93085280_93110747_93110954_93207403_93207458_93216737_93216912_93224613_93224776_93238370_93238491_93395606_93395709_93422770_93422969_93455661_93455975_93490638_93490778_93515215_93515412_93626268_93626436_93769209_93769451_93772075
H1_mix_00069114	chr4	+	1036	6	NNC	ENSG00000152208.13	novel	5783	16	NA	NA	137255	-438251	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	102.927935955211	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGGCAGTTGACATTCC	63	False	NA	NA	False	AATAAA	-20	NA	92441911	92673996	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_92442311_92590130_92590287_92660577_92660630_92666673_92666741_92670425_92670466_92673674
H1_mix_00069116	chr4	+	487	5	FSM	ENSG00000138696.11	ENST00000506363.5	731	5	244	0	97	0	multi-exon	FALSE	canonical	1	3	junction_1	3.11247489949718	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTTTACTTATATCTGT	113	False	NA	NA	False	NA	NA	NA	94996039	95123835	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_94996135_95104407_95104568_95114719_95114823_95115684_95115788_95123809
H1_mix_00069118	chr4	+	2479	15	FSM	ENSG00000138698.15	ENST00000453712.6	2470	15	-9	0	0	0	multi-exon	FALSE	canonical	3	9	junction_11	51.6827054324396	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGGTTTCTCCTTTTTC	3	True	NA	23	True	AATAAA	-24	NA	98261459	98442666	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_98261570_98293404_98293516_98343138_98343262_98352475_98352602_98379016_98379164_98391951_98392081_98404476_98404603_98416744_98416889_98417366_98417499_98418656_98418792_98420018_98420145_98421257_98421395_98433935_98434063_98436939_98437069_98441989
H1_mix_00069119	chr4	+	676	4	FSM	ENSG00000246090.8	ENST00000509939.1	677	4	1	0	1	0	multi-exon	FALSE	canonical	2	5	junction_1	0.816496580927726	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGTATGTTTGTCGCAAT	NA	False	NA	NA	False	ATTAAA	-19	NA	99290936	99301298	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_99291006_99300298_99300371_99300468_99300656_99300950
H1_mix_00069120	chr4	+	3302	17	FSM	ENSG00000153064.12	ENST00000322953.9	3322	17	-53	73	-53	0	multi-exon	TRUE	canonical	0	0	junction_2	2.11301768804712	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTGAGTTTTTAAAGTAA	11	True	NA	NA	False	AATAAA	-18	NA	101790676	102074739	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_101790951_101829807_101830207_101855034_101855190_101862525_101862665_101870504_101870645_101895304_101895411_101917992_101918190_102021513_102021593_102025200_102025510_102029959_102030266_102043838_102043908_102060210_102060390_102063074_102063139_102071274_102071305_102072344_102072401_102073683_102073749_102074004
H1_mix_00069121	chr4	+	322	1	FSM	ENSG00000251288.2	ENST00000513388.2	1241	1	-39	958	-39	-958	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCATGTTCCATGATGAC	NA	False	NA	NA	False	AATAGA	-33	NA	102751361	102751683	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_102751400_102751700
H1_mix_00069122	chr4	+	4041	12	FSM	ENSG00000138780.15	ENST00000394730.7	4043	12	2	0	-1	0	multi-exon	FALSE	canonical	3	15	junction_2	27.5624010277266	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATTTCTCCTAAGATTT	-13	True	NA	9	True	AATAAA	-21	NA	105708785	105847725	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_105709017_105717592_105717779_105719059_105719528_105726578_105726831_105729405_105729500_105822953_105823070_105823230_105823276_105825671_105825801_105834460_105834595_105837858_105837890_105842064_105842135_105845440
H1_mix_00069123	chr4	+	4271	12	NNC	ENSG00000138780.15	novel	4304	12	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	30.7259278888059	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATTTCTCCTAAGATTT	13	True	NA	9	True	AATAAA	-21	NA	105708811	105847725	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_105709017_105717592_105718040_105719059_105719528_105726578_105726831_105729405_105729500_105822953_105823065_105823230_105823276_105825671_105825801_105834460_105834595_105837858_105837890_105842064_105842135_105845440
H1_mix_00069124	chr4	+	2007	1	FSM	ENSG00000164022.18	ENST00000682186.1	2001	1	-6	0	-6	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTAAAATTACTATATTC	1	True	NA	NA	False	AAGAAA	-10	NA	106316516	106318523	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_106316500_106318500
H1_mix_00069125	chr4	+	5955	7	FSM	ENSG00000138796.18	ENST00000640752.2	5955	7	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_4	21.5619263208709	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTAGGCAGAAGCTATT	0	True	NA	10	True	AGTAAA	-7	NA	107989846	108035157	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_107990065_108009758_108009888_108014430_108014589_108019539_108019667_108023473_108027761_108033175_108033293_108034238
H1_mix_00069126	chr4	+	1908	9	FSM	ENSG00000138796.18	ENST00000640060.1	1895	9	-13	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	142.572788427526	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAATCACTGTTGCAAAT	-6	True	NA	-36	True	NA	NA	NA	107989888	108035022	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_107990065_108004663_108004918_108009758_108009888_108014430_108014589_108019539_108019667_108023473_108023564_108027687_108027761_108033175_108033293_108034238
H1_mix_00069127	chr4	+	1187	5	FSM	ENSG00000198856.13	ENST00000512478.2	663	5	-70	-454	-8	29	multi-exon	FALSE	canonical	3	4	junction_3	1450.17677801708	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTAAGTTTTTGGTCTAT	NA	False	NA	58	True	NA	NA	NA	108650576	108667849	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_108650795_108655563_108655658_108657449_108657648_108663232_108663307_108667246
H1_mix_00069128	chr4	+	4589	24	NIC	ENSG00000138802.11	novel	4066	25	NA	NA	44	-447	combination_of_known_junctions	FALSE	canonical	3	42	junction_3	32.6334398871125	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGACAGTATGGTTTGGTG	19	True	NA	4	True	ATTAAA	-10	NA	109433858	109540449	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_109434003_109462900_109463645_109473003_109473187_109481676_109481782_109491326_109491408_109494614_109494857_109506330_109506513_109510008_109510112_109511956_109512084_109513746_109513857_109516527_109516641_109520365_109520485_109521116_109521173_109521419_109521627_109524817_109524942_109525345_109525505_109526225_109526400_109527321_109527433_109530288_109530465_109531384_109531523_109532638_109532744_109533592_109533686_109538492_109538597_109539560
H1_mix_00069129	chr4	+	700	1	FSM	ENSG00000273447.1	ENST00000608733.1	700	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCACGACCACCTCCTGAT	NA	False	NA	NA	False	AGTAAA	-19	NA	109692003	109692703	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_109692000_109692700
H1_mix_00069131	chr4	+	411	1	FSM	ENSG00000250966.2	ENST00000321285.4	411	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCCACTATGATGGGAAA	115	False	NA	NA	False	NA	NA	NA	112564987	112565398	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_112565000_112565400
H1_mix_00069136	chr4	+	2149	2	FSM	ENSG00000164100.9	ENST00000394488.2	2184	2	0	35	0	-35	multi-exon	FALSE	canonical	2	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGATTGTTTACTATTAA	245	False	NA	NA	False	CATAAA	-2	NA	118033617	118055610	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_118033912_118053755
H1_mix_00069137	chr4	+	1114	1	FSM	ENSG00000269893.9	ENST00000667980.1	1105	1	-9	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCATTGTTCCTTGACTGA	NA	False	NA	14	True	AATAAA	-20	NA	118278708	118279822	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_118278700_118279800
H1_mix_00069138	chr4	+	309	4	FSM	ENSG00000269893.9	ENST00000602483.6	353	4	41	3	0	-1	multi-exon	FALSE	canonical	3	26	junction_1	320.479155155041	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTCATTGTTCCTTGACT	-4	True	NA	12	True	AATAAA	-18	NA	118278754	118279820	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_118278793_118279106_118279138_118279388_118279432_118279623
H1_mix_00069139	chr4	+	657	5	ISM	ENSG00000154608.14	ENST00000502249.6	4587	17	55722	2937	55722	-2937	internal_fragment	FALSE	canonical	3	36	junction_2	39.7138200126858	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGAGCATGGTATAGTAATT	6981	False	NA	NA	False	NA	NA	NA	118523311	118551163	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_118523446_118537860_118538039_118540218_118540390_118544315_118544405_118551078
H1_mix_00069141	chr4	+	934	6	NNC	ENSG00000260404.4	novel	4395	10	NA	NA	40	1771	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_5	11.9230868486311	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGCATGATTGATAAAATC	25	False	NA	NA	False	NA	NA	NA	118591812	118611255	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_118591896_118595911_118596023_118597093_118597226_118605583_118605820_118608657_118608723_118610948
H1_mix_00069143	chr4	+	911	3	NNC	ENSG00000172403.11	novel	3934	5	NA	NA	-349	-185762	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	2	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAACAGAAAAATGTAG	NA	False	NA	93	True	ATTAAA	-13	NA	118850338	118851685	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_118850589_118850711_118850941_118851253
H1_mix_00069147	chr4	+	880	4	FSM	ENSG00000245958.7	ENST00000692067.1	917	4	38	-1	-1	1	multi-exon	FALSE	canonical	3	132	junction_1	18.6607133363712	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGGTCTCAATGTGGCA	NA	False	NA	NA	False	AATAAA	-18	NA	119454799	119462105	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_119455134_119460182_119460243_119460730_119460828_119461716
H1_mix_00069148	chr4	+	1514	11	NIC	ENSG00000245958.7	novel	1472	12	NA	NA	4	3	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	68.6848600493588	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTATTATCATTAATACTG	-10	True	NA	31	True	AATATA	-41	NA	119454829	119519654	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_119455134_119457970_119458171_119460182_119460243_119460730_119460828_119461716_119461852_119462895_119462980_119493332_119493438_119494432_119494524_119512350_119512465_119512812_119512971_119519488
H1_mix_00069150	chr4	+	1059	8	FSM	ENSG00000245958.7	ENST00000510011.6	1487	8	208	220	162	-220	multi-exon	FALSE	canonical	3	6	junction_7	53.1140474904363	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAAAGACACTGT	218	False	NA	NA	False	AATACA	-40	NA	119455057	119498072	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_119455134_119460182_119460243_119460730_119460828_119461716_119461852_119462895_119462980_119493332_119493438_119494432_119494524_119497661
H1_mix_00069153	chr4	+	3741	23	NIC	ENSG00000138688.17	novel	5111	29	NA	NA	-10568	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_16	3.37498086924483	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAGAAAAAGCAAA	NA	False	NA	NA	False	NA	NA	NA	122186180	122239929	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_122186223_122187430_122187513_122187894_122188089_122189999_122190080_122192228_122192380_122196634_122196792_122197195_122197275_122199358_122199451_122201008_122201127_122207109_122207266_122207540_122207639_122209158_122209338_122209817_122209925_122210886_122211096_122219339_122219568_122220332_122220471_122224500_122224678_122226706_122226836_122229120_122229241_122229930_122230212_122234772_122235024_122238091_122238351_122239515
H1_mix_00069154	chr4	+	10737	57	NIC	ENSG00000138688.17	novel	16162	88	NA	NA	-2366	0	combination_of_known_junctions	TRUE	canonical	2	4	junction_20	22.2812495527664	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTGTAGTAGTTTTTCA	3878	False	NA	25	True	AATAAA	-17	NA	122243853	122362750	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_122244028_122245019_122245141_122246151_122246299_122246682_122246811_122247157_122247358_122249484_122249683_122250361_122250574_122254194_122254347_122254804_122254956_122255130_122255284_122257254_122257496_122258700_122258844_122262763_122262984_122263441_122263601_122264251_122264428_122266782_122266959_122271017_122271725_122272159_122272406_122274342_122274437_122275971_122276023_122279774_122279982_122281535_122281775_122286540_122286786_122289086_122289193_122301299_122301398_122304797_122304984_122305876_122306046_122307948_122308161_122309265_122309465_122313627_122313688_122315461_122315689_122316731_122316863_122318146_122318271_122324426_122324537_122325229_122325321_122325854_122325918_122328103_122328358_122331325_122331542_122333628_122333810_122334343_122334441_122336191_122336354_122336880_122337021_122339206_122339409_122343409_122343611_122344381_122344562_122346622_122346761_122347521_122347780_122348566_122348718_122349157_122349316_122349449_122349643_122349856_122350075_122352903_122353156_122353813_122354018_122355795_122355991_122356620_122356756_122359556_122359723_122362030
H1_mix_00069155	chr4	+	823	2	FSM	ENSG00000145375.9	ENST00000675392.1	1372	2	20	529	20	-529	multi-exon	FALSE	canonical	3	47	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGATTTCAGTTGCTTTG	NA	False	NA	NA	False	NA	NA	NA	122933438	122934860	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_122933498_122934096
H1_mix_00069157	chr4	+	2504	2	FSM	ENSG00000164056.11	ENST00000394339.2	2504	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCTCGATTTCTTCAT	1035	False	NA	NA	False	AATATA	-14	NA	123399509	123403755	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_123399795_123401536
H1_mix_00069161	chr4	+	2454	10	NNC	ENSG00000138709.19	novel	1593	8	NA	NA	-477	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	40.8577780195076	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATTAACCATTTATGCAT	-3	True	NA	-35	True	NA	NA	NA	128060808	128108854	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_+_128061226_128074459_128074519_128074933_128074994_128077787_128077963_128082164_128082306_128091000_128091145_128091346_128091513_128098185_128098331_128107138_128107314_128107882
H1_mix_00069163	chr4	+	1122	8	FSM	ENSG00000138709.19	ENST00000503725.1	1181	8	59	0	59	0	multi-exon	FALSE	canonical	1	1	junction_7	7.92309978506403	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGTTGTCTTTATTGTG	51	False	NA	NA	False	NA	NA	NA	128179405	128222595	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_128179513_128199438_128199600_128200520_128200666_128206427_128206538_128207255_128207384_128209855_128209994_128220354_128220441_128222348
H1_mix_00069164	chr4	+	3526	9	ISM	ENSG00000077684.16	ENST00000512960.5	3000	11	230	8255	118	-2	5prime_fragment	FALSE	canonical	3	44	junction_1	237.330959579655	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGTGGCATTACTTA	172	False	NA	16	True	AATAAA	-17	NA	128810148	128864079	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_128810292_128831732_128831811_128842952_128843039_128846374_128846533_128848979_128849168_128852056_128852269_128855629_128855798_128857337_128857455_128861703
H1_mix_00069165	chr4	+	1357	2	Intergenic	novelGene_1104	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	18	junction_1	0	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGATGGTATTCCTTTCT	NA	False	NA	NA	False	NA	NA	NA	130440692	130442076	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_130440821_130440847
H1_mix_00069173	chr4	+	1760	10	NIC	ENSG00000109445.11	novel	1891	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	77.4711415804477	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTTGACATTATATTTA	5	True	NA	NA	False	AATAAA	-19	NA	141220933	141234697	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_141221017_141222365_141222492_141224486_141224507_141224606_141224678_141226766_141226847_141229570_141229698_141230165_141230271_141231438_141231486_141232524_141232643_141233714
H1_mix_00069180	chr4	+	665	5	FSM	ENSG00000164167.12	ENST00000515311.5	545	5	-34	-86	-34	86	multi-exon	FALSE	canonical	0	0	junction_4	541.024491127712	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAGTTAGGAGGAATAAG	NA	False	NA	NA	False	NA	NA	NA	146175668	146200086	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_146175812_146182911_146183016_146187273_146187388_146189621_146189782_146199942
H1_mix_00069182	chr4	+	673	6	FSM	ENSG00000145425.10	ENST00000515792.5	671	6	-2	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	7460.13073343893	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGCTTCTGAACATTC	26	False	NA	13	True	AATAAA	-16	NA	151099668	151104637	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_151099715_151100484_151100589_151100974_151101013_151102870_151103080_151104176_151104287_151104471
H1_mix_00069185	chr4	+	11322	13	NIC	ENSG00000164142.16	novel	11517	14	NA	NA	0	0	intron_retention	FALSE	canonical	2	13	junction_2	9.32253840014737	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTAATTCATTTATTC	0	True	NA	40	True	ATTAAA	-17	NA	151409245	151670503	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_151409466_151454700_151454809_151566137_151566365_151577449_151578077_151586640_151586800_151588839_151588927_151629701_151629870_151638676_151638757_151646557_151646749_151649458_151650593_151656231_151656411_151656759_151656899_151662500
H1_mix_00069189	chr4	+	7789	10	FSM	ENSG00000109654.16	ENST00000675363.1	7789	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	57.8761982250705	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTGTTTTCTCCATTTG	25	True	NA	-2	True	NA	NA	NA	153204468	153339301	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_153204561_153275892_153276131_153292981_153293134_153294304_153294486_153295312_153296037_153315484_153315589_153315831_153316000_153322647_153324149_153328529_153328671_153334813
H1_mix_00069190	chr4	+	760	3	ISM	ENSG00000109654.16	ENST00000675019.1	8088	11	-7	63047	-7	-14	5prime_fragment	FALSE	canonical	3	20	junction_1	75	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTTTACCAGCCCTCAG	7	True	NA	0	True	ATTAAA	-3	NA	153257391	153276254	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_+_153257608_153270337_153270520_153275892
H1_mix_00069191	chr4	+	931	3	NIC	ENSG00000109654.16	novel	766	3	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	83.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGACTACCTGCTCACT	12	True	NA	14	True	ATTAAA	-17	NA	153257396	153276268	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_153257767_153270334_153270520_153275892
H1_mix_00069195	chr4	+	6369	4	FSM	ENSG00000171503.13	ENST00000683209.1	6369	4	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	5.31245915016974	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGTTGTCTATTTTAAAAA	NA	False	NA	NA	False	TATAAA	-2	NA	158699980	158710716	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_158703592_158706188_158706372_158706628_158706851_158708363
H1_mix_00069196	chr4	+	7529	30	NIC	ENSG00000109756.10	novel	8225	30	NA	NA	-433	-7	combination_of_known_junctions	FALSE	canonical	3	26	junction_6	15.9033196752883	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAATGAATCATGCATG	558	False	NA	NA	False	AATAAA	-28	NA	159103744	159360162	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_159104232_159186641_159186713_159193199_159193257_159210499_159210584_159238808_159238885_159241200_159241369_159304341_159304474_159314590_159314769_159322346_159322484_159323458_159323618_159329857_159330011_159330333_159330499_159331430_159331539_159331629_159331834_159331925_159332035_159332450_159332698_159338310_159338469_159339113_159339355_159341563_159341948_159342978_159343191_159343280_159343405_159344035_159344060_159345105_159345330_159346788_159346999_159350136_159350290_159351058_159351182_159352684_159352911_159353486_159354047_159355852_159356159_159358113
H1_mix_00069205	chr4	+	9010	28	NIC	ENSG00000218336.9	novel	3394	15	NA	NA	118	-1895	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	38.7612013103737	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTGTGATTTTTTTAAAA	55	False	NA	NA	False	AATAAA	-16	NA	182144104	182801129	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_182144162_182323945_182324253_182346650_182346930_182600923_182601162_182628650_182628890_182653770_182653894_182673004_182673220_182679665_182679877_182680247_182680350_182680542_182680738_182681813_182682015_182688165_182688352_182714086_182714234_182728964_182729182_182730199_182730320_182730877_182731140_182736807_182737076_182738400_182738545_182743169_182743420_182751799_182752033_182753449_182753605_182754384_182755260_182773471_182773648_182774917_182775154_182789092_182789390_182792273_182793886_182796636_182796768_182799595
H1_mix_00069207	chr4	+	8247	26	NIC	ENSG00000218336.9	novel	3394	15	NA	NA	31	-1895	combination_of_known_splicesites	FALSE	canonical	3	8	junction_7	45.9198257836416	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTGTGATTTTTTTAAAA	0	True	NA	NA	False	AATAAA	-16	NA	182449029	182801129	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_+_182449084_182600923_182601162_182628650_182628890_182653770_182653894_182673004_182673220_182679665_182679877_182680247_182680350_182681813_182682015_182688165_182688352_182714086_182714234_182728964_182729182_182730199_182730320_182730877_182731140_182736807_182737076_182738400_182738545_182743169_182743420_182744142_182744164_182751799_182752033_182753449_182753605_182754384_182755260_182773471_182773648_182774917_182775154_182789092_182789390_182792273_182793886_182796636_182796768_182799595
H1_mix_00069214	chr4	+	2140	14	FSM	ENSG00000109794.14	ENST00000514153.5	2070	14	-72	2	-8	0	multi-exon	FALSE	canonical	3	25	junction_2	9.03445082864188	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACTTTGCACTGTAAAGA	-17	True	NA	5	True	AATAAA	-14	NA	186144854	186172140	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_+_186145113_186149172_186149284_186149592_186149705_186151902_186152046_186153644_186153771_186154467_186154639_186155999_186156191_186157564_186157720_186162844_186162949_186163423_186163634_186165343_186165465_186166967_186167097_186167180_186167263_186171913
H1_mix_00069222	chr4	-	2639	1	FSM	ENSG00000251188.1	ENST00000511111.1	550	1	-868	-1221	-868	1221	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGTGTAGGTAAGAGATG	NA	False	NA	54	True	NA	NA	NA	270399	267760	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_267800_270400
H1_mix_00069223	chr4	-	478	1	FSM	ENSG00000248564.1	ENST00000508039.1	487	1	36	-27	36	27	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCAGACTCGGTCCCGCCG	NA	False	NA	NA	False	NA	NA	NA	338547	338069	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_338100_338500
H1_mix_00069224	chr4	-	213	1	FSM	ENSG00000272885.1	ENST00000609771.1	420	1	-72	279	-72	-279	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTACTTTTTTTAACCCA	NA	False	NA	NA	False	NA	NA	NA	416609	416396	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_416400_416600
H1_mix_00069225	chr4	-	2440	4	NIC	ENSG00000182903.16	novel	1679	5	NA	NA	7	865	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	6.59966329107444	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGTGGCAAGCTGGGC	0	True	NA	NA	False	AATAAA	-19	NA	499149	424949	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_427120_435769_435880_437445_437512_499055
H1_mix_00069226	chr4	-	1679	5	FSM	ENSG00000182903.16	ENST00000515578.5	1679	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	115.813157715348	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATTGATATAACAGTTC	87	False	NA	NA	False	NA	NA	NA	474051	425814	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_427120_435769_435880_437445_437512_472574_472702_473980
H1_mix_00069228	chr4	-	2738	2	FSM	ENSG00000249592.7	ENST00000665579.1	2441	2	29	-326	0	41	multi-exon	FALSE	canonical	1	3	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCGACACGGTGCAGTCA	17	True	NA	NA	False	AATACA	-11	NA	781830	760160	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_762840_781771
H1_mix_00069229	chr4	-	2617	2	FSM	ENSG00000249592.7	ENST00000660016.1	2617	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATTCAGGAAGCAAAAGAA	-2	True	NA	NA	False	AAGAAA	-42	NA	781849	760201	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_762741_781771
H1_mix_00069230	chr4	-	1441	2	FSM	ENSG00000249592.7	ENST00000652800.1	1441	2	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTTGTTGAGTGTGAAT	11	True	NA	-74	True	NA	NA	NA	781836	766239	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_767616_781771
H1_mix_00069234	chr4	-	710	4	ISM	ENSG00000159692.16	ENST00000290921.10	2297	9	19	13912	0	0	5prime_fragment	FALSE	canonical	3	172	junction_3	540.094024736023	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGTCGGCCGCAGCTCCA	0	True	NA	NA	False	NA	NA	NA	1249118	1225359	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_1225567_1228198_1228344_1238182_1238338_1248915
H1_mix_00069236	chr4	-	1623	7	FSM	ENSG00000163950.13	ENST00000429429.6	1623	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	180.127424033346	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCACTGACTGGGGCTGTT	-1	True	NA	-10	True	AATAAA	-16	NA	1712318	1692799	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_1693714_1694773_1694841_1696201_1696352_1699563_1699702_1700010_1700071_1703595_1703701_1712129
H1_mix_00069237	chr4	-	546	4	FSM	ENSG00000130997.16	ENST00000511777.1	566	4	17	3	5	-3	multi-exon	TRUE	canonical	2	3	junction_1	1.24721912892465	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTCATCCTTGTCTGAGT	NA	False	NA	-6	True	AGTAAA	-16	NA	2081036	2071962	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_2072300_2072967_2073030_2075451_2075520_2080957
H1_mix_00069238	chr4	-	2259	10	NNC	ENSG00000130997.16	novel	2183	17	NA	NA	6244	-13336	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	3.0951973949298	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAAATCCTCTTCTTCTTC	6227	False	NA	NA	False	NA	NA	NA	2222987	2169832	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_2170775_2171097_2171182_2173954_2174020_2174690_2174752_2179307_2179466_2193203_2193317_2198523_2198718_2207986_2208488_2213046_2213127_2222926
H1_mix_00069239	chr4	-	3835	7	NNC	ENSG00000123933.17	novel	3871	6	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	160.890922332147	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGCTGGCTCCGGCTCTT	-8	True	NA	-3	True	TATAAA	-20	NA	2262153	2247431	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_2248117_2248196_2250702_2251083_2251247_2252407_2252523_2257981_2258012_2261724_2261825_2261916
H1_mix_00069240	chr4	-	1812	12	NIC	ENSG00000109736.15	novel	1717	13	NA	NA	2	0	intron_retention	FALSE	canonical	3	409	junction_11	117.058931262974	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAAGTGCCTTTCGCCAT	9	True	NA	-10	True	AATAAA	-17	NA	2934813	2930566	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_2931151_2931226_2931275_2931374_2931466_2931554_2931664_2931824_2931937_2932044_2932154_2932350_2932513_2932599_2932759_2933105_2933210_2933566_2933664_2933752_2933945_2934768
H1_mix_00069241	chr4	-	974	3	NIC	ENSG00000251669.6	novel	741	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	13	junction_2	11.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCTTACTGTGCAGCAGG	22	False	NA	NA	False	NA	NA	NA	3955408	3942910	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_3943373_3953110_3953174_3954959
H1_mix_00069242	chr4	-	1068	5	NNC	ENSG00000170891.11	novel	989	4	NA	NA	2	-13	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	18.2208671582886	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCACATGAGAAACACGTGT	50	False	NA	-13	True	AATAAA	-8	NA	5019435	5014598	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_5015235_5016835_5016965_5017134_5017180_5018240_5018356_5019292
H1_mix_00069243	chr4	-	262	3	FSM	ENSG00000251580.3	ENST00000667300.1	1607	3	0	1345	0	-1345	multi-exon	FALSE	canonical	3	3	junction_1	0.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTGCCACCACATCTGG	371	False	NA	NA	False	NA	NA	NA	6673729	6659451	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_6659571_6661939_6662037_6673683
H1_mix_00069244	chr4	-	2907	18	NNC	ENSG00000087008.16	novel	2872	18	NA	NA	-788	25	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_17	80.9547697204089	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTACCCAGCAAGTCCT	6687	False	NA	20	True	NA	NA	NA	8429274	8366256	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_8367081_8370907_8370995_8373560_8373629_8374977_8375153_8381491_8381608_8389172_8389287_8389611_8389735_8392332_8392454_8394619_8394743_8396936_8397120_8399555_8399653_8405954_8406044_8410211_8410356_8414291_8414382_8414853_8414929_8415765_8416000_8416377_8416536_8429188
H1_mix_00069245	chr4	-	2402	17	NNC	ENSG00000087008.16	novel	2374	17	NA	NA	4697	0	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_2	78.1928455406887	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGCCGTGGGTTTTTTGAT	4699	False	NA	-25	True	AAGAAA	-24	NA	8436026	8366711	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_8367081_8370907_8370995_8374977_8375153_8381491_8381608_8389172_8389287_8389611_8389735_8392332_8392454_8394619_8394743_8396936_8397120_8399555_8399653_8405954_8406044_8410211_8410356_8414291_8414382_8414853_8414929_8415765_8416000_8416377_8416536_8435922
H1_mix_00069247	chr4	-	1826	4	NIC	ENSG00000288075.1	novel	1440	3	NA	NA	27	9	intron_retention	FALSE	canonical	0	0	junction_2	13.5728487143349	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATACTTTGTTTCTGTGTC	142	False	NA	-4	True	NA	NA	NA	9152248	9034509	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_9035546_9064241_9064331_9151094_9151440_9151892
H1_mix_00069248	chr4	-	4618	17	Fusion	ENSG00000261490.1_ENSG00000071127.17	novel	3142	15	NA	NA	0	0	multi-exon	FALSE	non_canonical	0	0	junction_8	535.616875667674	422	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTCATGTGATTAATTCT	3	True	NA	-4	True	AATAAA	-44	NA	10116868	10068088	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr4_-_10069148_10069675_10069825_10073990_10075485_10077303_10077449_10077752_10077927_10078890_10079002_10081356_10081445_10083021_10083177_10084440_10084531_10087706_10087941_10088292_10088374_10088663_10088742_10097710_10097892_10098991_10099140_10103895_10103987_10116112_10116235_10116650
H1_mix_00069249	chr4	-	723	1	FSM	ENSG00000273133.1	ENST00000609724.1	556	1	-102	-65	-102	65	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGCTGAACAATAACCACG	NA	False	NA	NA	False	NA	NA	NA	15564355	15563632	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_15563600_15564400
H1_mix_00069250	chr4	-	2837	11	NIC	ENSG00000118564.15	novel	2951	12	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_7	168.620995134058	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTTGTGTTGTGATTTT	6	True	NA	-1	True	AATAAA	-28	NA	15655337	15605005	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_15605800_15612265_15612415_15625251_15625978_15626872_15626956_15627884_15628034_15630665_15630792_15636493_15636671_15638507_15638695_15640787_15640884_15644492_15644709_15655203
H1_mix_00069251	chr4	-	1128	2	FSM	ENSG00000137441.8	ENST00000259989.7	1105	2	-31	8	-31	-5	multi-exon	FALSE	canonical	0	0	junction_1	0	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGAAATACGACTTTAGT	11	False	NA	NA	False	AATAAA	-9	NA	15963206	15960252	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_15960612_15962437
H1_mix_00069255	chr4	-	2718	2	FSM	ENSG00000169744.13	ENST00000509803.1	2718	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAAGTGAATCTGGCTA	NA	False	NA	-16	True	AATAAA	-15	NA	16507227	16501543	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_16502874_16505839
H1_mix_00069256	chr4	-	2492	9	NIC	ENSG00000169744.13	novel	2476	9	NA	NA	5	0	intron_retention	FALSE	canonical	3	29	junction_2	54.1720349903896	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAAGTGAATCTGGCTA	319	False	NA	-16	True	AATAAA	-15	NA	16898616	16501543	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_16502874_16505839_16505983_16508534_16508684_16511980_16512105_16585921_16586006_16588709_16588833_16595702_16595876_16759157_16759261_16898353
H1_mix_00069257	chr4	-	2527	9	NIC	ENSG00000169744.13	novel	2476	9	NA	NA	6	0	intron_retention	FALSE	canonical	3	10	junction_2	53.197156878916	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAAGTGAATCTGGCTA	2	True	NA	-16	True	AATAAA	-15	NA	16898654	16501543	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_16502874_16505839_16505983_16508540_16508687_16511980_16512105_16585921_16586006_16588709_16588833_16595702_16595876_16759157_16759261_16898353
H1_mix_00069258	chr4	-	2626	8	FSM	ENSG00000169744.13	ENST00000502640.5	2626	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	51.4265872633118	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAGCAAGTGAATCTGGC	22	True	NA	-18	True	AATAAA	-13	NA	16898634	16501545	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_16503132_16508534_16508687_16511980_16512105_16585921_16586006_16588709_16588833_16595702_16595876_16759157_16759261_16898353
H1_mix_00069260	chr4	-	299	2	Intergenic	novelGene_1010	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	953	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGGCCATTTACACTTCTT	NA	False	NA	NA	False	NA	NA	NA	16975323	16974993	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_-_16975080_16975110
H1_mix_00069261	chr4	-	275	2	Intergenic	novelGene_1013	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTTCAGGCCATCTGGG	NA	False	NA	NA	False	NA	NA	NA	17003827	16997824	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_-_16997932_17003659
H1_mix_00069262	chr4	-	2236	3	NNC	ENSG00000163257.11	novel	757	2	NA	NA	0	7220	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	9	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTTGGTTTTTTGTG	17	True	NA	-2	True	AATAAA	-28	NA	17810711	17793434	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_17795053_17804403_17804757_17810446
H1_mix_00069263	chr4	-	4657	4	NNC	ENSG00000163257.11	novel	4547	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	9.0921211313239	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTATGGTCATTTGTCC	17	True	NA	0	True	AATAAA	-24	NA	17810711	17800654	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_17804772_17805106_17805226_17809536_17809693_17810446
H1_mix_00069264	chr4	-	10430	8	FSM	ENSG00000178177.16	ENST00000635767.1	10430	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	71.7842572702172	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAATTTCAGATTTTTT	NA	False	NA	-23	True	AATAAA	-13	NA	18021876	17841198	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_17845902_17873387_17878214_17886067_17886162_17909093_17909346_17961902_17962033_17962969_17963050_17972819_17972886_18021597
H1_mix_00069265	chr4	-	575	5	FSM	ENSG00000152990.14	ENST00000511051.5	682	5	0	107	0	-107	multi-exon	FALSE	canonical	1	1	junction_1	167.407437110781	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGCAACTAGTGAAAGTCAA	NA	False	NA	NA	False	NA	NA	NA	22401504	22345177	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_22345346_22346732_22346824_22389087_22389184_22392544_22392691_22401430
H1_mix_00069267	chr4	-	629	2	ISM	ENSG00000251292.1	ENST00000507666.1	639	4	5648	3752	5648	-3752	internal_fragment	FALSE	canonical	1	1	junction_1	0	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGCAGGGACACCTGCCTT	5633	False	NA	NA	False	NA	NA	NA	23727931	23727013	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_23727432_23727720
H1_mix_00069268	chr4	-	6256	13	NNC	ENSG00000109819.9	novel	6288	13	NA	NA	-116046	-4	at_least_one_novel_splicesite	TRUE	canonical	2	6	junction_7	6.23776580373311	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACTTCTGCTTTTCTTAT	NA	False	NA	-3	True	AATAAA	-20	NA	24020135	23792024	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_23795926_23801729_23801882_23802223_23802346_23812746_23812868_23813020_23813126_23813689_23814606_23824279_23824354_23824462_23824509_23828399_23828605_23829462_23829586_23831556_23831752_23884751_23884932_24020019
H1_mix_00069269	chr4	-	7509	2	NNC	ENSG00000109606.13	novel	470	3	NA	NA	5168	2052	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTATTCCCTAAGCATA	NA	False	NA	NA	False	NA	NA	NA	24524911	24515388	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_24515417_24517430
H1_mix_00069270	chr4	-	2072	3	FSM	ENSG00000109606.13	ENST00000512903.1	2071	3	0	-1	0	-1	multi-exon	FALSE	canonical	3	1323	junction_1	10	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGGCCAAAGCCCTTTG	NA	False	NA	-29	True	AATAAA	-15	NA	24534199	24527475	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_24528042_24529600_24529771_24532863
H1_mix_00069271	chr4	-	608	3	NNC	ENSG00000181982.19	novel	3869	12	NA	NA	2	-69929	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	2	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTCCGCTGCCCCTGAGT	130	False	NA	NA	False	AATAAA	-38	NA	24912884	24906364	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_24906850_24910771_24910827_24912816
H1_mix_00069275	chr4	-	629	4	FSM	ENSG00000047365.13	ENST00000512804.1	758	4	129	0	129	0	multi-exon	FALSE	canonical	2	2	junction_1	0.942809041582063	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGCTCAAAGAAAATGGAC	2179	False	NA	NA	False	NA	NA	NA	36159612	36148440	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_36148508_36150899_36151045_36158729_36158865_36159330
H1_mix_00069276	chr4	-	1341	8	FSM	ENSG00000231160.11	ENST00000669212.1	2149	8	0	808	0	45	multi-exon	FALSE	canonical	1	1	junction_3	3.09047252182628	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTCCCCAGAAATTATTA	5	True	NA	NA	False	TATAAA	-1	NA	38664873	38612600	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_38613260_38614624_38614709_38624421_38624530_38625601_38625763_38628038_38628103_38630499_38630582_38635955_38636059_38664793
H1_mix_00069278	chr4	-	4619	6	NNC	ENSG00000163683.12	novel	6252	5	NA	NA	0	740	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	209.63587479246	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTTGGAAATTAGATTGC	-1	True	NA	NA	False	CATAAA	-39	NA	39638865	39547095	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_39548984_39549856_39552159_39556427_39556571_39572414_39572464_39605070_39605181_39638738
H1_mix_00069280	chr4	-	4638	7	NIC	ENSG00000163697.17	novel	1681	7	NA	NA	32	-2275	combination_of_known_junctions	FALSE	canonical	3	69	junction_6	80.2982288444493	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTCGGCTCATTTATCTGA	18	True	NA	NA	False	AATAAA	-16	NA	40857123	40812302	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_40816260_40821870_40822051_40823643_40823760_40825886_40825971_40827131_40827220_40830462_40830578_40857025
H1_mix_00069282	chr4	-	1637	3	NNC	ENSG00000188848.17	novel	8627	6	NA	NA	0	-32185	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	4	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATTTCTTGATGTGCTG	-1	True	NA	NA	False	ATTAAA	-22	NA	42152655	42143124	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_42143995_42151733_42152377_42152531
H1_mix_00069283	chr4	-	8208	37	NIC	ENSG00000124406.16	novel	8270	37	NA	NA	50	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_22	8.84991455632884	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGAAGTTTTGATTGCT	18	True	NA	-3	True	AATAAA	-19	NA	42657043	42408372	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_42413014_42414626_42414719_42422806_42422900_42423616_42423706_42443564_42443673_42444577_42444635_42446582_42446645_42451980_42452060_42455296_42455420_42455524_42455600_42464689_42464801_42464892_42465077_42485495_42485669_42503449_42503515_42507015_42507155_42522159_42522300_42524762_42524848_42543916_42543987_42549012_42549063_42551197_42551281_42552504_42552611_42555967_42556041_42569160_42569206_42574618_42574708_42575621_42575700_42578259_42578388_42579812_42579979_42581620_42581733_42586348_42586477_42588259_42588330_42594288_42594363_42600477_42600519_42616032_42616079_42624535_42624635_42625613_42625714_42626994_42627110_42656824
H1_mix_00069284	chr4	-	441	1	FSM	ENSG00000273369.1	ENST00000610260.1	441	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGGCTCTTCAGCTTGC	NA	False	NA	NA	False	AATAAA	-19	NA	44694386	44693945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_44693900_44694400
H1_mix_00069285	chr4	-	3178	7	NNC	ENSG00000163281.12	novel	5382	6	NA	NA	0	78	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	17.3877351409933	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAACTGTGCTTTTTTTCT	-3	True	NA	NA	False	AATAAA	-7	NA	44726523	44703167	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_44705492_44707751_44707927_44710952_44711138_44717112_44717296_44718308_44718411_44722083_44722243_44726473
H1_mix_00069286	chr4	-	9986	9	FSM	ENSG00000109158.11	ENST00000264318.4	11147	9	0	1161	0	-1161	multi-exon	FALSE	canonical	0	0	junction_3	1.22474487139159	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCAGCATGTTGGCTTGT	0	True	NA	NA	False	NA	NA	NA	46993581	46920060	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_46928756_46964969_46965230_46971082_46971236_46974231_46974376_46977060_46977144_46977409_46977631_46979030_46979099_46992827_46992947_46993338
H1_mix_00069287	chr4	-	255	3	FSM	ENSG00000198515.16	ENST00000514520.6	405	3	102	48	-16	-46	multi-exon	FALSE	canonical	1	1	junction_1	1	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGCCATTGCACTTTTTA	NA	False	NA	NA	False	NA	NA	NA	47952705	47949880	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_47949896_47951352_47951470_47952582
H1_mix_00069288	chr4	-	11363	63	NNC	ENSG00000075539.15	novel	11692	64	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_61	13.3926241989553	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGTGTTGTATTTTAA	23	True	NA	-13	True	AATAAA	-16	NA	48780257	48497567	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_48499681_48500029_48500221_48501622_48501734_48505546_48505616_48510058_48510158_48510834_48510985_48512480_48512689_48515027_48515276_48521047_48521216_48522900_48523105_48527476_48527654_48527970_48528046_48528174_48528337_48531155_48531354_48534544_48534686_48535656_48535828_48539970_48540069_48540352_48540961_48542026_48542122_48543806_48543998_48544782_48544905_48546066_48546272_48547583_48547770_48548689_48548794_48549472_48549624_48550591_48550705_48551493_48551579_48553214_48553384_48556977_48557119_48557452_48557713_48561467_48561637_48562888_48562989_48563947_48564103_48564932_48565044_48565530_48565692_48567247_48567421_48570826_48570919_48573185_48573244_48575116_48575242_48576029_48576223_48578972_48579242_48580864_48580952_48581419_48581606_48582496_48582735_48586620_48586729_48589744_48589878_48590658_48590831_48593929_48594017_48595589_48595699_48595896_48596001_48598828_48598874_48602019_48602122_48603289_48603389_48605740_48605834_48606437_48606607_48608986_48609068_48609743_48609824_48619273_48619371_48620638_48620779_48623125_48623180_48634290_48634491_48710518_48710699_48780077
H1_mix_00069289	chr4	-	1886	6	FSM	ENSG00000145247.12	ENST00000514576.5	1886	6	0	0	0	0	multi-exon	FALSE	canonical	3	2038	junction_4	188.05467290126	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTCTGTCACTCACT	-2	True	NA	NA	False	AATAAA	-22	NA	48906798	48885381	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_48885566_48892771_48894054_48897803_48897858_48899828_48899926_48904483_48904612_48906657
H1_mix_00069290	chr4	-	1127	1	FSM	ENSG00000250473.1	ENST00000507982.1	486	1	-953	312	-953	-312	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTATGGAGAAAGCTCTTG	NA	False	NA	NA	False	NA	NA	NA	51866488	51865361	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_51865400_51866500
H1_mix_00069291	chr4	-	4012	5	NIC	ENSG00000163069.13	novel	4248	6	NA	NA	26	0	combination_of_known_splicesites	FALSE	canonical	3	42	junction_4	288.630386480703	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTGTTAATTTTTTAAG	10	True	NA	-26	True	AATAAA	-15	NA	52038273	52020705	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_52024161_52027967_52028100_52028729_52028922_52029677_52029864_52038226
H1_mix_00069292	chr4	-	1589	10	FSM	ENSG00000109189.13	ENST00000514536.5	1589	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	87.7141823069552	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTTATTTCAGTCTGAC	-23	True	NA	NA	False	NA	NA	NA	52659298	52597466	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_52597742_52598568_52598707_52601856_52602055_52604500_52604585_52610540_52610618_52626017_52626248_52627949_52628164_52631063_52631145_52658173_52658282_52659114
H1_mix_00069294	chr4	-	8097	24	NIC	ENSG00000134852.15	novel	4059	24	NA	NA	34	2140	combination_of_known_junctions	FALSE	canonical	3	9	junction_20	9.98543362544115	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGAGTGTTTATAACAG	431	False	NA	80	True	AATAAA	-17	NA	55546512	55430335	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_55435595_55438281_55438538_55442431_55442635_55443686_55443897_55444632_55444786_55448778_55448869_55449395_55449497_55450090_55450233_55453053_55453130_55453676_55453825_55455896_55456004_55456217_55456301_55458891_55459011_55459147_55459262_55463684_55463806_55470716_55470807_55475962_55476055_55478814_55478964_55479639_55479700_55482738_55482829_55486392_55486550_55489373_55489466_55509911_55510066_55546481
H1_mix_00069295	chr4	-	750	9	NIC	ENSG00000109255.11	novel	756	9	NA	NA	-47	1	combination_of_known_junctions	FALSE	canonical	3	23	junction_7	71.2459428669451	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTGCTTAGTGTTTTA	48	False	NA	-19	True	ATTAAA	-12	NA	55636745	55595232	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_55595412_55599141_55599182_55600521_55600576_55605274_55605350_55607297_55607349_55607436_55607467_55609119_55609180_55630401_55630461_55636543
H1_mix_00069297	chr4	-	441	1	FSM	ENSG00000227040.4	ENST00000514020.1	567	1	-45	171	-45	-171	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTTGTGAGAGACTGCA	NA	False	NA	NA	False	AAAAAG	-6	NA	56761530	56761089	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_56761100_56761500
H1_mix_00069298	chr4	-	609	2	FSM	ENSG00000128040.12	ENST00000618802.3	608	2	0	-1	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTACTGTTCTCTGTTG	-29	True	NA	1	True	AATAAA	-17	NA	56821742	56809860	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_56810185_56821457
H1_mix_00069299	chr4	-	447	1	FSM	ENSG00000269949.1	ENST00000602820.1	447	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAACTTGTTGTAGACCTT	NA	False	NA	-3	True	ATTAAA	-26	NA	56961373	56960926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_56960900_56961400
H1_mix_00069300	chr4	-	1014	1	FSM	ENSG00000250656.2	ENST00000513810.2	1014	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGTGAAGGGTTGAGGAT	NA	False	NA	NA	False	AATAAA	-25	NA	67717388	67716374	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_67716400_67717400
H1_mix_00069301	chr4	-	4662	17	NNC	ENSG00000083896.13	novel	6233	17	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_6	71.0717067474814	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTTTTGTATCTTTTTC	28	False	68350105	-23	True	AATAAA	-18	NA	68350077	68313321	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_68314324_68316313_68316449_68318518_68318582_68318689_68318730_68318825_68318863_68320122_68320206_68321371_68322916_68324138_68324224_68330001_68330120_68330201_68330311_68332102_68332198_68332793_68332848_68333307_68333398_68337026_68337451_68337571_68337901_68338282_68338385_68349725
H1_mix_00069302	chr4	-	459	2	FSM	ENSG00000272626.1	ENST00000608365.1	477	2	18	0	18	0	multi-exon	FALSE	canonical	1	2	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGGCACTCATTTT	248	False	NA	NA	False	AATAAA	-21	NA	68906965	68901007	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_68901376_68906874
H1_mix_00069303	chr4	-	2180	1	FSM	ENSG00000272986.1	ENST00000609599.1	745	1	-1473	38	-1473	-38	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAAACATTTTTATTACT	NA	False	NA	-26	True	NA	NA	NA	70705964	70703784	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_70703800_70706000
H1_mix_00069304	chr4	-	6247	22	FSM	ENSG00000156140.10	ENST00000286657.10	6244	22	-4	1	-4	-1	multi-exon	FALSE	canonical	0	0	junction_18	4.00339991561594	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTGGCTCTATCTAGAT	-1	True	NA	NA	False	AATAAA	-17	NA	72569225	72280969	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_72283705_72288750_72288869_72290854_72291063_72295653_72295787_72298276_72298443_72303916_72304081_72305986_72306068_72309396_72309521_72311047_72311182_72312290_72312467_72313676_72313823_72315857_72315972_72318571_72318705_72319331_72319476_72319857_72319964_72320713_72320871_72323013_72323098_72339493_72339694_72414814_72414972_72548477_72548885_72567373_72567402_72568693
H1_mix_00069305	chr4	-	3027	5	FSM	ENSG00000163626.17	ENST00000449739.6	3027	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	20.6215906273013	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTCATTTCTTTGATTGA	-11	True	NA	-6	True	AATAAA	-23	NA	73069741	73056079	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_73058288_73061812_73061921_73064777_73064900_73065249_73065414_73069316
H1_mix_00069306	chr4	-	11037	33	NIC	ENSG00000132466.20	novel	8456	34	NA	NA	-335	661	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	63.5306197706075	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTAGCTTTGGTTTTGA	-4	True	NA	NA	False	AATAAA	-22	NA	73259133	73072714	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_73076291_73076939_73077105_73077354_73077534_73078641_73078891_73085248_73085447_73090666_73092301_73094078_73094229_73097116_73097273_73098072_73098521_73102375_73102548_73113791_73113909_73115820_73115917_73118687_73118851_73120161_73120338_73120880_73121095_73121616_73121760_73124912_73125059_73125200_73125313_73135116_73135263_73141740_73141844_73142241_73142386_73142639_73142768_73144744_73144833_73146763_73146874_73147240_73147433_73148812_73149051_73151429_73151525_73153879_73154114_73155630_73155779_73156018_73156167_73161191_73161349_73177379_73177534_73258275
H1_mix_00069307	chr4	-	7818	34	NNC	ENSG00000132466.20	novel	10797	34	NA	NA	146	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	75.2508873796404	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTATATTGGATGATATT	953	False	NA	-15	True	ATTAAA	-15	NA	73258176	73075237	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_73076291_73076939_73077105_73077354_73077534_73078641_73078891_73085248_73085447_73090666_73092301_73094078_73094229_73097116_73097273_73098072_73098521_73102375_73102548_73113791_73113909_73115820_73115917_73118687_73118851_73120161_73120338_73120880_73121095_73121616_73121760_73124912_73125059_73125200_73125313_73135116_73135266_73141740_73141844_73142241_73142386_73142639_73142768_73144744_73144833_73146763_73146874_73147240_73147433_73148812_73149051_73151429_73151525_73153879_73154114_73155630_73155779_73156018_73156167_73161191_73161349_73177379_73177534_73234980_73235081_73258117
H1_mix_00069308	chr4	-	5619	24	NIC	ENSG00000132466.20	novel	3259	19	NA	NA	14	1627	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	64.2523675025181	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCGTTCTGAGTAGTGTGA	345	False	NA	0	True	AATAAA	-24	NA	73258784	73111456	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_73113312_73113791_73113909_73115820_73115917_73118687_73118851_73120161_73120338_73120880_73121095_73121616_73121760_73124912_73125059_73125200_73125313_73135116_73135266_73141740_73141844_73142241_73142386_73142639_73142768_73144744_73144833_73146763_73146874_73147240_73147433_73148812_73149051_73151429_73151525_73153879_73154114_73155630_73155779_73156018_73156167_73161191_73161349_73177379_73177534_73258275
H1_mix_00069309	chr4	-	6375	25	NIC	ENSG00000132466.20	novel	3259	19	NA	NA	11	1627	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	59.0613499300139	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCGTTCTGAGTAGTGTGA	9	True	NA	0	True	AATAAA	-24	NA	73258787	73111456	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_73113312_73113791_73113909_73115820_73115917_73118687_73118851_73120161_73120338_73120880_73121095_73121616_73121760_73124912_73125059_73125200_73125313_73135116_73135266_73139530_73140284_73141740_73141844_73142241_73142386_73142639_73142768_73144744_73144833_73146763_73146874_73147240_73147433_73148812_73149051_73151429_73151525_73153879_73154114_73155630_73155779_73156018_73156167_73161191_73161349_73177379_73177534_73258275
H1_mix_00069310	chr4	-	5986	25	NNC	ENSG00000132466.20	novel	3259	19	NA	NA	11	1242	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	62.0406312875325	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTTGTTGAATGAATAAA	9	True	NA	NA	False	CATAAA	-33	NA	73258787	73111841	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_73113308_73113791_73113909_73115820_73115917_73118687_73118851_73120161_73120338_73120880_73121095_73121616_73121760_73124912_73125059_73125200_73125313_73135116_73135266_73139530_73140284_73141740_73141844_73142241_73142386_73142639_73142768_73144744_73144833_73146763_73146874_73147240_73147433_73148812_73149051_73151429_73151525_73153879_73154114_73155630_73155779_73156018_73156167_73161191_73161349_73177379_73177534_73258275
H1_mix_00069311	chr4	-	561	3	FSM	ENSG00000163736.4	ENST00000296028.4	1307	3	35	711	35	-711	multi-exon	FALSE	canonical	0	0	junction_2	1.5	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCATTCTGTCTCAAAAA	8841	False	NA	NA	False	ATTAAA	-13	NA	73988155	73987149	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_73987375_73987516_73987653_73987955
H1_mix_00069314	chr4	-	6181	11	FSM	ENSG00000138757.15	ENST00000677192.1	6181	11	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_10	962.385141198678	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	-9	True	NA	NA	False	NA	NA	NA	75673161	75641848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75653982_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75673018
H1_mix_00069316	chr4	-	5117	11	FSM	ENSG00000138757.15	ENST00000677889.1	5117	11	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_10	1084.75556693663	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	1	True	NA	NA	False	NA	NA	NA	75673389	75641848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75653982_75654082_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75673207
H1_mix_00069318	chr4	-	6379	11	FSM	ENSG00000138757.15	ENST00000678875.1	6379	11	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_4	723.449072153666	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	NA	False	NA	NA	False	NA	NA	NA	75673548	75641848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75653982_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75673207
H1_mix_00069319	chr4	-	5189	12	FSM	ENSG00000138757.15	ENST00000677583.1	5189	12	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_11	963.60151738025	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	49	True	NA	NA	False	NA	NA	NA	75724377	75641848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75694797_75694930_75724275
H1_mix_00069320	chr4	-	5456	14	FSM	ENSG00000138757.15	ENST00000677620.1	5456	14	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_12	1185.59732529703	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	2	True	NA	NA	False	NA	NA	NA	75724424	75641848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75653982_75654082_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75694797_75694930_75724055_75724177_75724275
H1_mix_00069323	chr4	-	4117	11	NNC	ENSG00000138757.15	novel	2609	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	763.870152578303	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTTTGGACTAAACAAACA	0	True	NA	-63	True	NA	NA	NA	75673350	75642828	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658843_75658925_75661930_75662050_75673207
H1_mix_00069324	chr4	-	639	3	NIC	ENSG00000138757.15	novel	2441	2	NA	NA	1	18	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	79.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGAGTGATCTTTTTCTA	8	True	NA	NA	False	ATTAAA	-17	NA	75724418	75721869	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_75722245_75724055_75724177_75724275
H1_mix_00069325	chr4	-	1345	2	FSM	ENSG00000138757.15	ENST00000677094.1	2441	2	0	1096	0	482	multi-exon	FALSE	canonical	3	180	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTAAGGGCAGGACTATG	-1	True	NA	NA	False	AATAAA	-17	NA	75724427	75722983	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_75724177_75724275
H1_mix_00069326	chr4	-	1691	10	Fusion	ENSG00000138744.16_ENSG00000198301.12	novel	734	8	NA	NA	11	3	multi-exon	FALSE	canonical	3	8	junction_1	16.9275872432117	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCAAGTAGTGTTTTTC	36	False	NA	NA	False	AATAAA	-22	NA	75940962	75916434	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr4_-_75917115_75918760_75918790_75919908_75919976_75920737_75920801_75920950_75921124_75925734_75925812_75931213_75931305_75936108_75936236_75940000_75940166_75940743
H1_mix_00069329	chr4	-	1359	4	FSM	ENSG00000169248.13	ENST00000306621.8	1479	4	6	114	6	-114	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTGTTCATGCCTATA	10	True	NA	NA	False	AATACA	-13	NA	76036064	76033795	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_76034817_76035046_76035120_76035215_76035343_76035926
H1_mix_00069331	chr4	-	964	1	FSM	ENSG00000271676.1	ENST00000603335.1	964	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGCACTTTCACCTCTG	-5	False	NA	NA	False	NA	NA	NA	77113458	77112494	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_77112500_77113500
H1_mix_00069332	chr4	-	9361	13	NNC	ENSG00000138767.14	novel	1890	12	NA	NA	-646	5	at_least_one_novel_splicesite	TRUE	non_canonical	2	10	junction_1	4.12563126482885	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTTGGTTTTTGACTCT	-4	True	NA	-9	True	AATAAA	-25	NA	77820261	77713381	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_77714439_77714461_77720644_77726166_77726370_77728853_77729082_77731386_77731539_77742140_77742296_77744717_77744876_77748315_77748385_77756861_77756952_77773080_77773167_77774529_77774717_77776270_77776393_77819589
H1_mix_00069333	chr4	-	2288	8	FSM	ENSG00000163291.14	ENST00000511594.5	2288	8	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	146.367164824545	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTCATCATCTTGCTCT	-2	True	NA	NA	False	ATTAAA	-24	NA	78939225	78910837	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_78912064_78917760_78917881_78920533_78920682_78923856_78923948_78926520_78926719_78930169_78930326_78935120_78935284_78939039
H1_mix_00069334	chr4	-	2523	2	Antisense	novelGene_ENSG00000250334.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCTGTATTCTTTACTTC	NA	False	NA	NA	False	ATTAAA	-23	NA	79559352	79538877	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_-_79541160_79559111
H1_mix_00069335	chr4	-	4565	1	FSM	ENSG00000289480.1	ENST00000685826.1	1190	1	-1	-3374	-1	3374	mono-exon	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCATTTTTTGCACTGTC	7952	False	NA	-5	True	ATTAAA	-14	NA	82349442	82344877	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82344900_82349400
H1_mix_00069336	chr4	-	566	7	FSM	ENSG00000249242.8	ENST00000508701.5	566	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	21.2400303410539	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATCACTCTCTGTGTGGTC	21	True	NA	NA	False	AATGAA	-41	NA	82561955	82490084	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82490239_82496078_82496196_82502726_82502795_82502894_82502928_82503058_82503113_82504577_82504668_82561905
H1_mix_00069337	chr4	-	937	1	FSM	ENSG00000248113.2	ENST00000506227.2	1268	1	391	-60	391	60	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCAAGAGCAGATGCAAGA	NA	False	NA	NA	False	AATAGA	-28	NA	82580993	82580056	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82580100_82581000
H1_mix_00069339	chr4	-	2577	4	FSM	ENSG00000251022.6	ENST00000504792.6	2577	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	211.282328229841	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGAAATGGATGCTACTG	-16	True	NA	-95	True	AATAAA	-23	NA	82900508	82893544	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_82895775_82899712_82899738_82900076_82900224_82900333
H1_mix_00069340	chr4	-	1301	7	FSM	ENSG00000173085.15	ENST00000503915.5	1301	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	76.7407251000985	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGCCTTACTGTTCTTT	6076	False	NA	-16	True	AATAAA	-15	NA	83279058	83263823	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_83264364_83267089_83267209_83267585_83267775_83269859_83269994_83272086_83272173_83273495_83273618_83278947
H1_mix_00069341	chr4	-	3542	18	FSM	ENSG00000163312.11	ENST00000295488.8	3543	18	0	1	0	-1	multi-exon	TRUE	canonical	2	5	junction_12	9.14663324147083	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACTACGAATAATGTTTG	20	True	NA	NA	False	TATAAA	-29	NA	83455823	83407346	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_83407561_83416730_83416866_83418092_83418207_83421562_83421737_83425993_83426093_83427562_83427721_83429523_83429747_83431663_83431769_83432125_83432268_83436857_83437098_83439862_83440009_83441304_83441404_83443516_83443615_83446013_83446087_83446834_83447036_83448782_83448962_83453230_83453946_83455396
H1_mix_00069342	chr4	-	3426	18	NIC	ENSG00000163312.11	novel	3543	18	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	2	5	junction_12	4.30417838351217	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACTACGAATAATGTTT	24	True	NA	NA	False	TATAAA	-28	NA	83455819	83407347	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_83407561_83416730_83416866_83418092_83418207_83421562_83421737_83425993_83426093_83427562_83427721_83429523_83429747_83431663_83431769_83432125_83432268_83436857_83437098_83439862_83440009_83441304_83441404_83443516_83443615_83446013_83446087_83446834_83447036_83448782_83448962_83453230_83453946_83455507
H1_mix_00069344	chr4	-	2715	8	FSM	ENSG00000163322.14	ENST00000475656.6	2718	8	3	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	47.2604593757632	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATGTCAATATTTAAA	0	True	NA	-17	True	AATAAA	-17	NA	83485100	83460944	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_83462903_83463493_83463609_83467453_83467539_83469031_83469152_83470202_83470397_83476642_83476680_83482153_83482245_83484985
H1_mix_00069346	chr4	-	1732	3	FSM	ENSG00000163322.14	ENST00000515303.2	1732	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	74.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGTCTATAATATATATAG	92	False	NA	NA	False	AATAAA	-17	NA	83485065	83478807	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_83480369_83482153_83482245_83484985
H1_mix_00069347	chr4	-	2899	3	FSM	ENSG00000163623.10	ENST00000295886.5	3472	3	-86	659	-86	-657	multi-exon	FALSE	canonical	0	0	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGACTCAAGCCACACCTT	NA	False	NA	NA	False	TATAAA	-39	NA	84499378	84492643	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_84493550_84495671_84495845_84497558
H1_mix_00069348	chr4	-	14559	68	FSM	ENSG00000163625.16	ENST00000295888.9	14559	68	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_54	18.1669321795458	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAGTAATTTTTTTTTCA	-18	True	NA	-16	True	ATTAAA	-17	NA	84966690	84669596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_84672992_84677198_84677397_84678167_84678280_84678918_84679243_84682373_84682471_84683942_84684126_84688085_84688266_84690505_84690665_84691630_84691786_84692884_84693033_84695969_84696183_84696731_84696824_84702352_84702507_84704337_84704445_84705393_84705512_84708908_84709029_84709292_84709348_84713158_84713240_84715297_84715384_84716895_84717017_84718421_84718571_84721408_84721573_84724425_84724595_84726860_84726912_84733381_84733610_84735042_84735121_84736169_84736328_84737183_84737367_84739009_84739120_84740186_84740417_84741760_84741922_84743699_84743800_84751482_84751717_84753696_84753877_84755265_84755401_84756925_84757162_84765809_84766028_84766251_84766373_84772834_84772930_84774819_84774982_84775064_84775139_84778502_84778656_84780107_84780299_84782962_84783075_84785978_84786140_84787481_84787714_84789725_84789908_84794518_84794738_84794878_84794980_84796520_84796753_84797995_84798109_84801649_84801865_84803289_84803468_84808333_84808418_84809886_84810345_84817391_84817586_84820084_84820187_84821083_84821552_84826814_84826982_84829003_84829191_84831412_84831606_84836928_84837091_84841153_84841264_84849901_84850026_84860411_84860623_84896910_84897011_84932269_84932364_84966208
H1_mix_00069350	chr4	-	2423	14	FSM	ENSG00000109339.24	ENST00000395160.9	2448	14	38	-13	-1	0	multi-exon	FALSE	canonical	3	12	junction_5	13.1769926802239	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTAGAAAGAACATATGT	19	True	NA	-14	True	ATTAAA	-18	NA	86453181	86016477	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_86017376_86029196_86029275_86031367_86031432_86064265_86064391_86067772_86067956_86089205_86089278_86101051_86101218_86101893_86102033_86103185_86103245_86107222_86107353_86159297_86159468_86194335_86194408_86354529_86354645_86453029
H1_mix_00069351	chr4	-	2451	15	FSM	ENSG00000109339.24	ENST00000641157.1	2449	15	0	-2	0	0	multi-exon	FALSE	canonical	0	0	junction_14	14.6941609949986	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGAAGATGTAGCTTCCA	-13	True	NA	-68	True	AATATA	-25	NA	86594088	86016531	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_86017371_86029196_86029275_86031367_86031432_86064265_86064391_86067772_86067956_86098523_86098596_86101051_86101218_86101893_86102033_86103185_86103245_86107222_86107353_86159297_86159468_86194335_86194408_86354529_86354645_86399746_86399807_86593909
H1_mix_00069352	chr4	-	2069	4	FSM	ENSG00000284968.1	ENST00000508280.6	2158	4	0	89	0	-89	multi-exon	FALSE	canonical	1	3	junction_1	3.09120616516523	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCACAGAAAATTTGTCACA	2	True	NA	NA	False	AGTAAA	-28	NA	86936202	86924718	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_86926327_86932221_86932320_86933394_86933543_86935987
H1_mix_00069355	chr4	-	1647	8	ISM	ENSG00000152583.13	ENST00000503414.5	2520	12	35081	-83	34608	0	3prime_fragment	FALSE	canonical	2	2	junction_6	5.2566769979926	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTATGCAAGTGTATTTC	5549	False	NA	-5	True	AATAAA	-20	NA	87494011	87473334	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_87473804_87479429_87479579_87480371_87480521_87482423_87482561_87490272_87490394_87490759_87490879_87491617_87491691_87493581
H1_mix_00069356	chr4	-	3169	18	FSM	ENSG00000138640.15	ENST00000508369.5	3169	18	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_17	8.90783256291103	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCACTAGCCAAACATAAAG	-15	True	NA	NA	False	GGGGCT	-11	NA	88823201	88727654	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_88728660_88731326_88731429_88732001_88732199_88737471_88737556_88739029_88739126_88746931_88747016_88747630_88747852_88748951_88749034_88749770_88749910_88750423_88750638_88758753_88758902_88767552_88767596_88767982_88768060_88781164_88781352_88787752_88787933_88790585_88790628_88805010_88805053_88822975
H1_mix_00069357	chr4	-	2590	16	FSM	ENSG00000138640.15	ENST00000513837.5	2590	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_15	9.92773891679269	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCTGGATAACTGAGAAACA	0	True	NA	NA	False	AATATA	-11	NA	88823230	88728178	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_88728660_88731326_88731429_88732001_88732199_88737471_88737556_88739029_88739126_88746931_88747016_88747630_88747852_88748951_88749034_88749770_88749910_88750423_88750638_88758753_88758902_88767552_88767596_88767982_88768060_88781164_88781352_88787752_88787933_88822975
H1_mix_00069358	chr4	-	950	4	ISM	ENSG00000138640.15	ENST00000512339.5	1511	6	7	82531	7	-1615	5prime_fragment	FALSE	canonical	3	12	junction_1	27.956315128349	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAATAGCAATTTTATGT	28	False	NA	NA	False	ATTAAA	-27	NA	89057143	88937897	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_88938242_89020459_89020670_89029459_89029650_89056937
H1_mix_00069359	chr4	-	395	1	Genic_Genomic	ENSG00000185477.5	novel	NA	NA	NA	NA	-209	-62680	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGAGACGCCCCCTGCGC	19	True	NA	NA	False	NA	NA	NA	89308009	89307614	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr4_-_89307600_89308000
H1_mix_00069360	chr4	-	1120	1	FSM	ENSG00000249239.2	ENST00000510601.2	933	1	851	-1038	851	1038	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATTGCTTCTAGGTTATT	788	False	NA	NA	False	NA	NA	NA	92822067	92820947	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_92820900_92822100
H1_mix_00069361	chr4	-	408	4	NNC	ENSG00000246541.2	novel	1042	9	NA	NA	31879	-7164	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	10.1980390271856	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGCATTGAGGAGAATAATA	NA	False	NA	NA	False	NA	NA	NA	94175677	94124955	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_94125043_94136023_94136160_94165847_94165926_94175570
H1_mix_00069362	chr4	-	528	4	NNC	ENSG00000246541.2	novel	1042	9	NA	NA	31879	-46178	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	13.8162545173751	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTCCTTGCACATAAATAT	NA	False	NA	NA	False	AATAAA	-43	NA	94175677	94163969	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_94164232_94165115_94165197_94165847_94165926_94175570
H1_mix_00069364	chr4	-	1871	4	Antisense	novelGene_ENSG00000253170.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_3	15.6276108929747	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTCTCTCAGTGATTAA	NA	False	NA	-15	True	AATAAA	-41	NA	97141382	97133325	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr4_-_97134736_97139504_97139759_97139856_97139979_97141297
H1_mix_00069365	chr4	-	3331	7	NIC	ENSG00000168785.8	novel	3347	8	NA	NA	-131	0	combination_of_known_splicesites	FALSE	canonical	3	58	junction_5	58.2802139094679	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGTGTCTTTCTTCAT	43	False	NA	-5	True	AATAAA	-32	NA	98658742	98470366	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_98472588_98476188_98476306_98476412_98476461_98478684_98478811_98482004_98482176_98507677_98507729_98658145
H1_mix_00069366	chr4	-	4213	1	FSM	ENSG00000272777.1	ENST00000609071.1	870	1	438	-3781	438	3781	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTTTTTTTTTTTTTTT	7344	False	NA	NA	False	AAAAAG	-13	NA	99067687	99063474	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_99063500_99067700
H1_mix_00069367	chr4	-	1475	7	FSM	ENSG00000197894.12	ENST00000512621.5	1475	7	0	0	0	0	multi-exon	FALSE	canonical	3	2669	junction_1	96.7585769956453	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAACATAATAAAAGTAA	3510	False	NA	-61	True	CATAAA	-25	NA	99085216	99072185	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_99072712_99074913_99075050_99076291_99076553_99076703_99076924_99081364_99081453_99081974_99082117_99085114
H1_mix_00069368	chr4	-	3453	8	NIC	ENSG00000145331.14	novel	3694	8	NA	NA	71	2	combination_of_known_junctions	FALSE	canonical	3	8	junction_7	12.3618900873051	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTGCTGAAATACAGAAT	438	False	NA	NA	False	AATAAA	-44	NA	99563597	99546706	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_99549357_99550884_99550991_99553784_99553935_99556145_99556221_99557344_99557417_99558048_99558212_99559153_99559351_99563557
H1_mix_00069370	chr4	-	1512	3	NIC	ENSG00000164032.12	novel	866	5	NA	NA	0	32	intron_retention	FALSE	canonical	3	11803	junction_2	510	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTGTTTTGAGTATCTC	5	True	NA	-1	True	ATTAAA	-19	NA	99950268	99948053	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_99949387_99949662_99949741_99950167
H1_mix_00069371	chr4	-	539	1	FSM	ENSG00000248820.2	ENST00000503440.2	264	1	10	-285	10	285	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAACACTGCATCAGTAC	NA	False	NA	NA	False	AATAAA	-28	NA	100042094	100041555	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_100041600_100042100
H1_mix_00069372	chr4	-	3339	9	NNC	ENSG00000138821.14	novel	3068	9	NA	NA	0	58296	intron_retention	FALSE	non_canonical	0	0	junction_1	101.014773053252	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGGATATTGTGTCCTG	-1	True	NA	NA	False	NA	NA	NA	102345207	102192783	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_102192817_102261665_102263194_102267489_102267675_102267871_102268080_102304316_102304482_102304988_102305112_102307435_102307606_102315667_102315831_102344443
H1_mix_00069374	chr4	-	627	4	FSM	ENSG00000109323.11	ENST00000511813.1	628	4	1	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	23.6126143312331	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAATAGATATGTAAGTAT	-1	True	NA	NA	False	AATGAA	-28	NA	102760982	102723873	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_102723968_102726588_102726684_102753822_102753996_102760717
H1_mix_00069378	chr4	-	660	1	NIC	ENSG00000250920.3	novel	1314	4	NA	NA	2008	-5518	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCCTTTTAAAGCCTATAA	NA	False	NA	NA	False	ATTAAA	-28	NA	103557104	103556444	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_103556400_103557100
H1_mix_00069379	chr4	-	238	1	ISM	ENSG00000251259.1	ENST00000504082.1	549	2	3050	52	3050	-52	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTGCTAAATGTAATAGT	9248	False	NA	NA	False	NA	NA	NA	105137569	105137331	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_105137300_105137600
H1_mix_00069383	chr4	-	2711	13	NIC	ENSG00000164089.9	novel	2086	13	NA	NA	-12	3	combination_of_known_splicesites	FALSE	canonical	3	7	junction_12	6.82316316348624	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTACTAGAAAAGTGT	31	False	NA	NA	False	AATAAA	-22	NA	108763020	108742044	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_108742613_108743788_108743857_108746398_108746530_108746761_108746852_108748004_108748160_108749237_108749464_108750935_108751019_108752894_108753012_108754619_108754711_108756417_108756493_108759748_108759909_108760187_108760307_108762192
H1_mix_00069384	chr4	-	5680	9	ISM	ENSG00000188517.17	ENST00000642955.1	8026	39	464532	-1	-5528	1	3prime_fragment	FALSE	canonical	2	4	junction_8	4.17582327212252	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCCTCTTTTCTTTGAT	NA	False	NA	NA	False	TATAAA	-24	NA	108838220	108808723	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_108813930_108817396_108817436_108819811_108819899_108824173_108824228_108825195_108825223_108827134_108827189_108832379_108832434_108834354_108834391_108838097
H1_mix_00069385	chr4	-	1653	3	ISM	ENSG00000188517.17	ENST00000399126.1	2674	35	-165	225807	-56	-225509	intron_retention	FALSE	canonical	2	12	junction_1	12	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTGTCATGCTTTTACT	NA	False	NA	NA	False	NA	NA	NA	109302808	109049682	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_109050180_109300582_109300653_109301722
H1_mix_00069386	chr4	-	327	1	FSM	ENSG00000243227.3	ENST00000464534.3	297	1	-70	40	-70	-40	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTACTCCAGCCTGAGCA	NA	False	NA	NA	False	NA	NA	NA	109451138	109450811	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_109450800_109451100
H1_mix_00069387	chr4	-	604	1	FSM	ENSG00000225094.3	ENST00000457046.3	852	1	364	-116	364	116	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGGTCTCTTTTCTCTA	7182	False	NA	NA	False	NA	NA	NA	109553730	109553126	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_109553100_109553700
H1_mix_00069388	chr4	-	4044	5	NNC	ENSG00000123739.11	novel	5219	4	NA	NA	0	32186	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	202.969209487548	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTTCCTTATAAGGAAC	14	True	NA	NA	False	AATAAA	-32	NA	109729956	109677802	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_109677831_109711077_109714496_109717547_109717714_109718682_109718760_109729601
H1_mix_00069390	chr4	-	364	1	FSM	ENSG00000272795.1	ENST00000609440.1	364	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTGTGTGTGTAATTT	NA	False	NA	NA	False	ATTAAA	-14	NA	109815410	109815046	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_109815000_109815400
H1_mix_00069391	chr4	-	6339	5	NNC	ENSG00000170522.10	novel	6454	5	NA	NA	0	12998	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	124.8466559424	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGAGTTGCCAGCTCTTT	825	False	NA	NA	False	NA	NA	NA	110198366	110032847	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_110032876_110045855_110051763_110059602_110059755_110105496_110105629_110198246
H1_mix_00069392	chr4	-	1922	1	ISM	ENSG00000170522.10	ENST00000302274.8	6570	4	150848	0	12272	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTTTCTGTTTTCTCTT	3609	False	NA	0	True	AATAAA	-27	NA	110047767	110045845	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_110045800_110047800
H1_mix_00069393	chr4	-	1444	2	NNC	ENSG00000164093.18	novel	1608	3	NA	NA	-639	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTGGATTCTTTCTCC	3641	False	NA	-9	True	AGTAAA	-17	NA	110619465	110617422	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_110618689_110619287
H1_mix_00069394	chr4	-	1608	3	FSM	ENSG00000164093.18	ENST00000645131.1	1608	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	13.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTGGATTCTTTCTCC	1372	False	NA	-9	True	AGTAAA	-17	NA	110621734	110617422	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_110618689_110621163_110621370_110621598
H1_mix_00069395	chr4	-	2749	5	ISM	ENSG00000138658.16	ENST00000506675.1	2279	10	12433	-93	12433	-3	intron_retention	FALSE	canonical	3	119	junction_4	2.34520787991171	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTCTGTTTGCCAAAGA	NA	False	NA	-2	True	AATAAA	-24	NA	112549105	112539335	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_112539690_112539862_112540125_112540820_112540956_112541091_112541269_112547284
H1_mix_00069396	chr4	-	7981	26	NIC	ENSG00000138658.16	novel	6648	28	NA	NA	13	0	intron_retention	FALSE	canonical	3	47	junction_16	21.8509130244024	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGATTTCTGTTTGCCAA	2	True	NA	-5	True	AATAAA	-21	NA	112636885	112539338	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_112539690_112539862_112540125_112540820_112540956_112541091_112541269_112547284_112547409_112548252_112548381_112553834_112553983_112554704_112554783_112558149_112558310_112560732_112562486_112563130_112563275_112581662_112581803_112583977_112584175_112585540_112585726_112586444_112586584_112587279_112587930_112589723_112589875_112606007_112606092_112609378_112609430_112612523_112612589_112617439_112619691_112620001_112620191_112623816_112623877_112631929_112632011_112633155_112633243_112636694
H1_mix_00069397	chr4	-	708	2	ISM	ENSG00000249532.6	ENST00000509938.2	389	3	669	198	628	-193	3prime_fragment	FALSE	canonical	3	26819	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACAAACGCAAATCCCTTT	3659	False	NA	66	True	NA	NA	NA	112648071	112646917	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr4_-_112646969_112647414
H1_mix_00069398	chr4	-	1914	3	FSM	ENSG00000145349.18	ENST00000509907.1	860	3	-836	-218	-325	218	multi-exon	FALSE	canonical	2	3	junction_1	60.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCATTTCCATTGAAATG	367	False	NA	-64	True	NA	NA	NA	113762252	113754520	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_113755091_113759319_113759415_113761003
H1_mix_00069399	chr4	-	392	1	FSM	ENSG00000178636.8	ENST00000624134.1	423	1	123	-92	123	92	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTATATTTTAATCAGTTT	NA	False	NA	NA	False	AATAAA	-42	NA	119195568	119195176	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_119195200_119195600
H1_mix_00069402	chr4	-	5253	15	NIC	ENSG00000138738.11	novel	5207	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	18.1362473899028	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGGTGTTAGCATTTTA	-9	True	NA	-1	True	AATAAA	-20	NA	120922858	120691914	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_120695276_120710308_120710414_120777187_120777282_120781142_120781304_120784997_120785092_120798266_120798425_120799660_120799746_120811369_120811450_120816452_120816575_120816831_120816925_120818352_120818528_120821170_120821346_120853417_120853541_120907473_120907558_120922515
H1_mix_00069404	chr4	-	314	2	Genic_Genomic	ENSG00000237868.1	novel	479	1	NA	NA	48	50	multi-exon	FALSE	canonical	3	67	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGCCACCCCAACTCCTG	NA	False	NA	NA	False	NA	NA	NA	122078270	122077789	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr4_-_122078050_122078216
H1_mix_00069405	chr4	-	1527	4	Intergenic	novelGene_1102	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGCCCAAGGCTACACTA	NA	False	NA	NA	False	NA	NA	NA	125567438	125517051	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_-_125517097_125561583_125562218_125564838_125565108_125566859
H1_mix_00069406	chr4	-	4196	2	FSM	ENSG00000164073.11	ENST00000504126.1	545	2	-108	-3543	-108	0	multi-exon	FALSE	canonical	3	50	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATATGTACCTTAAGCTTT	NA	False	NA	-28	True	AATAAA	-13	NA	127922097	127917813	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_127921772_127921859
H1_mix_00069408	chr4	-	1380	3	Intergenic	novelGene_1105	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	3.5	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAACTAACAAACAGAAAG	NA	False	NA	NA	False	NA	NA	NA	130576374	130442110	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_-_130443340_130574332_130574373_130576263
H1_mix_00069410	chr4	-	509	2	FSM	ENSG00000109381.21	ENST00000515489.1	510	2	0	1	0	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTAAAAATCTGGTGATC	NA	False	NA	NA	False	AATAAA	-16	NA	139060595	139028112	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_139028350_139060323
H1_mix_00069411	chr4	-	2748	6	NIC	ENSG00000109381.21	novel	1965	7	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	3	29	junction_3	67.6047335620813	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGTTTTGGTCTCTGG	-7	True	NA	-5	True	AATATA	-14	NA	139084338	139057861	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_139059608_139060323_139060675_139061864_139062058_139071865_139072004_139073453_139073568_139084132
H1_mix_00069412	chr4	-	611	5	NNC	ENSG00000109390.13	novel	664	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_4	1352.19312599939	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTGTATTCTTCAGATA	10	True	NA	-34	True	AATAAA	-14	NA	139302477	139289952	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_139290093_139292529_139292610_139295042_139295147_139295731_139295957_139302415
H1_mix_00069413	chr4	-	242	1	FSM	ENSG00000239005.1	ENST00000459613.1	127	1	35	-150	35	150	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTCCGTCTTTCAAATA	NA	False	NA	NA	False	NA	NA	NA	139436459	139436217	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_139436200_139436500
H1_mix_00069417	chr4	-	689	7	FSM	ENSG00000164162.14	ENST00000513054.5	689	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	107.649766475465	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACACCAGTAGAAGAGAGC	390	False	NA	NA	False	ATTAAA	-5	NA	145098180	144995455	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_144995604_145064571_145064693_145081659_145081751_145095984_145096112_145097494_145097563_145097687_145097761_145098119
H1_mix_00069420	chr4	-	2784	12	NNC	ENSG00000164169.13	novel	3461	12	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_8	40.7639850767665	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAATAAAAGGGTAGCATT	19	True	NA	-10	True	AATAAA	-18	NA	147684123	147638386	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_147638748_147638959_147639083_147642786_147642941_147653851_147654567_147657791_147657976_147660845_147661039_147668538_147668646_147670640_147670709_147672958_147673127_147673637_147673875_147680322_147680472_147683798
H1_mix_00069421	chr4	-	9815	56	NIC	ENSG00000198589.14	novel	10148	57	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_52	58.2059211438007	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGATCTCTATTTCTCTT	-5	True	NA	-28	True	AATAAA	-19	NA	151015256	150264658	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_150265813_150277852_150278005_150282449_150282647_150285932_150286035_150302624_150302793_150310228_150310385_150315560_150315624_150321190_150321384_150325808_150325899_150349991_150350160_150415437_150415591_150435588_150435709_150436723_150436865_150467672_150467786_150471623_150471740_150487731_150487835_150490917_150491036_150588047_150588185_150590712_150590860_150599006_150599132_150683550_150683718_150735257_150735367_150761782_150761848_150798080_150798143_150806270_150806405_150808319_150808399_150817123_150817258_150828179_150828622_150831816_150831977_150844099_150844208_150844657_150844780_150848817_150848999_150849421_150849576_150850723_150850903_150851884_150852944_150867670_150867864_150868181_150868306_150870524_150870607_150871344_150871454_150872662_150872756_150893051_150893150_150896393_150896457_150897738_150897819_150900048_150900218_150905837_150905991_150906296_150906406_150908333_150908468_150908659_150908858_150914194_150914342_150915607_150915728_150916400_150916528_150916616_150916739_150928515_150928617_150928833_150929066_151014426_151014862_151015201
H1_mix_00069422	chr4	-	10125	58	NNC	ENSG00000198589.14	novel	10353	58	NA	NA	-33936	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_56	56.8688695923924	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGATCTCTATTTCTCTT	6198	False	NA	-28	True	AATAAA	-19	NA	151049663	150264658	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr4_-_150265813_150277852_150278005_150282449_150282647_150285932_150286035_150302624_150302793_150310228_150310385_150315560_150315624_150321190_150321384_150325808_150325899_150349991_150350160_150415437_150415591_150435588_150435709_150436723_150436865_150467672_150467786_150471623_150471740_150487731_150487835_150490917_150491036_150588047_150588185_150590712_150590860_150599006_150599132_150683550_150683718_150735257_150735367_150761782_150761848_150798080_150798143_150806270_150806405_150808319_150808399_150817123_150817258_150828179_150828622_150831816_150831977_150844099_150844208_150844657_150844780_150848817_150848999_150849421_150849576_150850723_150850903_150851884_150852944_150867670_150867864_150868181_150868306_150870524_150870607_150871344_150871454_150872662_150872756_150893051_150893150_150896393_150896457_150897738_150897819_150900048_150900218_150905837_150905991_150906296_150906406_150908333_150908468_150908659_150908858_150914194_150914342_150915607_150915728_150916400_150916528_150916616_150916739_150921197_150921294_150928515_150928617_150928833_150929066_151014426_151014862_151049349_151049387_151049431
H1_mix_00069424	chr4	-	5096	19	NIC	ENSG00000109686.19	novel	5207	20	NA	NA	67	0	combination_of_known_splicesites	TRUE	canonical	3	29	junction_17	62.1480957268132	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCTTTCTCATACTAGAC	-5	True	NA	-5	True	AATAAA	-19	NA	151325538	151120283	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_151122208_151127617_151127716_151128169_151128357_151132330_151132384_151133033_151133237_151135073_151135133_151137731_151137863_151139774_151139848_151143909_151144051_151147921_151148187_151149499_151149562_151159239_151159353_151165588_151165697_151174669_151175675_151176533_151176688_151176816_151176956_151179354_151179398_151226046_151226087_151325240
H1_mix_00069426	chr4	-	2167	8	NIC	ENSG00000109686.19	novel	659	7	NA	NA	-177	-56	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	88.8268207335637	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTATATTATTCAAGGTT	NA	False	NA	3	True	AATAAA	-18	NA	151325782	151170588	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_151170792_151174669_151175675_151176533_151176688_151176816_151176956_151179354_151179398_151187422_151187464_151226046_151226087_151325240
H1_mix_00069427	chr4	-	590	3	FSM	ENSG00000059691.12	ENST00000508611.1	605	3	0	15	0	-15	multi-exon	FALSE	canonical	1	4	junction_1	88	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTATCACTGTAATGTTT	7	True	NA	-13	True	ATTAAA	-9	NA	151760990	151721960	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_151722216_151758771_151758923_151760806
H1_mix_00069442	chr4	-	629	4	FSM	ENSG00000164104.12	ENST00000506267.1	629	4	0	0	0	0	multi-exon	FALSE	canonical	1	26	junction_3	1158.23898896366	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAGTCAGCCAAAGATAAA	893	False	NA	-63	True	AAGAAA	-20	NA	173334249	173332888	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr4_-_173332996_173333068_173333215_173333499_173333670_173334043
H1_mix_00069454	chr4	-	7054	11	NIC	ENSG00000154556.18	novel	1790	12	NA	NA	0	-1066	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	36.0456654814417	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGCTTTTGTTGGAATAT	NA	False	NA	-1	True	AATAAA	-22	NA	185690599	185639960	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_185646072_185646667_185646783_185649466_185649657_185651783_185651829_185652661_185652729_185657423_185657597_185662103_185662243_185678422_185678479_185678795_185678823_185684753_185684847_185690561
H1_mix_00069455	chr4	-	7217	10	NIC	ENSG00000154556.18	novel	1790	12	NA	NA	0	-1066	combination_of_known_junctions	FALSE	canonical	3	20	junction_9	41.4499549509055	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGCTTTTGTTGGAATAT	-8	True	NA	-1	True	AATAAA	-22	NA	185775451	185639960	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr4_-_185646072_185646667_185646783_185649466_185649657_185651783_185651829_185652661_185652729_185657423_185657597_185662103_185662243_185678422_185678548_185678795_185678823_185775226
H1_mix_00069460	chr4	+	639	1	Intergenic	novelGene_1005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTTTTCTTATAGGGGT	NA	False	NA	NA	False	CATAAA	-42	NA	4664280	4664919	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_4664300_4664900
H1_mix_00069461	chr4	+	1225	1	Intergenic	novelGene_1016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTACGGAGGCAAGGGAAA	NA	False	NA	NA	False	NA	NA	NA	23723892	23725117	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_23723900_23725100
H1_mix_00069462	chr4	+	249	1	Intergenic	novelGene_1020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCCTCACTATCCCTCAA	2195	False	NA	NA	False	NA	NA	NA	24323645	24323894	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_24323600_24323900
H1_mix_00069463	chr4	+	1687	1	Intergenic	novelGene_1021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCCTGCCCACCAGAGAA	4876	False	NA	NA	False	NA	NA	NA	24326326	24328013	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_24326300_24328000
H1_mix_00069464	chr4	+	6513	1	Intergenic	novelGene_1022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTTTGTGCAAAAAGTTA	1166	False	NA	NA	False	AATAAA	-43	NA	24330439	24336952	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_24330400_24337000
H1_mix_00069465	chr4	+	2445	1	Intergenic	novelGene_1026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCATTTTTCCCACTTCA	5487	False	NA	NA	False	AATAAA	-34	NA	39533496	39535941	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_39533500_39535900
H1_mix_00069466	chr4	+	3992	1	Intergenic	novelGene_1031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCCCTCTAACTCATCA	143	False	NA	NA	False	NA	NA	NA	61215713	61219705	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_61215700_61219700
H1_mix_00069467	chr4	+	7330	1	Intergenic	novelGene_1037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTTTATTTTAACTTG	4330	False	NA	NA	False	AATAAA	-12	NA	74162517	74169847	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_74162500_74169800
H1_mix_00069468	chr4	+	268	1	Intergenic	novelGene_1038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75599278	75599546	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_75599300_75599500
H1_mix_00069469	chr4	+	509	1	Intergenic	novelGene_1040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTACATGAGAAAAAGTGAC	NA	False	NA	NA	False	NA	NA	NA	77548051	77548560	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_77548100_77548600
H1_mix_00069470	chr4	+	1619	1	Intergenic	novelGene_1044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGGAAGGGGCCTGAAG	NA	False	NA	NA	False	NA	NA	NA	79553911	79555530	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_79553900_79555500
H1_mix_00069472	chr4	+	249	1	Intergenic	novelGene_1076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCGGCCTGGGCGACAGA	NA	False	NA	NA	False	NA	NA	NA	88327355	88327604	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_88327400_88327600
H1_mix_00069473	chr4	+	230	1	Intergenic	novelGene_1077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGTGAAAGCGAAGAGAGG	NA	False	NA	NA	False	NA	NA	NA	89966987	89967217	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_89967000_89967200
H1_mix_00069474	chr4	+	6745	1	Intergenic	novelGene_1082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTGATTTAAAATTGGTGA	NA	False	NA	NA	False	NA	NA	NA	92270302	92277047	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_92270300_92277000
H1_mix_00069475	chr4	+	825	1	Intergenic	novelGene_1088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGCAGCAGCTGCTGCAC	NA	False	NA	NA	False	NA	NA	NA	94085873	94086698	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_94085900_94086700
H1_mix_00069476	chr4	+	941	1	Intergenic	novelGene_1089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTACATTGACAATAAAATG	NA	False	NA	NA	False	AATAAA	-2	NA	94087389	94088330	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_94087400_94088300
H1_mix_00069478	chr4	+	205	1	Intergenic	novelGene_1103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTAATGTGGAGTGGGGA	NA	False	NA	NA	False	NA	NA	NA	127514375	127514580	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr4_+_127514400_127514600
H1_mix_00069488	chr5	+	2565	12	NNC	ENSG00000153404.15	novel	12591	20	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_2	77.174054647555	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGTGGAGAAAAAAAATTT	-38	True	NA	18	True	AATAAA	-29	NA	92114	157110	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_92277_113250_113449_139605_140110_140224_140717_143046_143257_143379_143504_144826_144921_151512_151600_154874_154992_155344_155444_156070_156211_156772
H1_mix_00069489	chr5	+	12631	20	FSM	ENSG00000153404.15	ENST00000637938.2	12591	20	-40	0	-40	0	multi-exon	FALSE	canonical	3	21	junction_13	83.9776384956913	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTACTGTGTCCTTCG	-25	True	NA	12	True	CATAAA	-16	NA	92127	189966	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_92277_113250_113449_139482_140717_143046_143257_143379_143504_144826_144921_151512_151600_154874_154992_155344_155444_156070_156211_156772_156912_161782_161945_162721_163549_169339_169593_171042_171133_171213_171445_172896_173068_173917_174099_181513_181676_182003
H1_mix_00069490	chr5	+	2754	11	ISM	ENSG00000153404.15	ENST00000637938.2	12591	20	-4	32856	-4	0	5prime_fragment	FALSE	canonical	3	161	junction_3	33.1246132052889	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGTGGAGAAAAAAAATTT	11	True	NA	18	True	AATAAA	-29	NA	92163	157110	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_92277_113250_113449_139482_140717_143046_143257_143379_143504_144826_144921_151512_151600_154874_154992_155344_155444_156070_156211_156772
H1_mix_00069494	chr5	+	2710	15	FSM	ENSG00000073578.18	ENST00000264932.11	2693	15	-17	0	0	0	multi-exon	FALSE	canonical	3	414	junction_7	49.6243028018674	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCCTGGCCTTGTAGTT	0	True	NA	NA	False	NA	NA	NA	218302	257082	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_218419_223481_223569_224359_224522_225418_225563_225882_226048_228184_228334_230875_231001_233476_233646_235143_235340_236427_236600_240357_240477_250991_251104_251337_251469_254392_254507_256333
H1_mix_00069495	chr5	+	2067	13	FSM	ENSG00000073578.18	ENST00000504309.5	2067	13	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_11	136.606770411361	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTTTATTTCCAAATC	0	True	NA	NA	False	AATAAA	-16	NA	218302	256682	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_218419_223481_223569_224359_224522_225418_225563_225882_226048_228184_228334_230875_231001_233476_233646_235143_235340_236427_236600_240357_240477_254392_254507_256333
H1_mix_00069496	chr5	+	2278	6	FSM	ENSG00000073578.18	ENST00000511810.5	3001	6	723	0	723	0	multi-exon	FALSE	canonical	3	477	junction_3	54.2313562434133	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTCTTTTATTTCCAA	6960	False	NA	NA	False	AATAAA	-13	NA	235143	256679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_236600_240357_240477_250991_251104_251337_251469_254392_254507_256333
H1_mix_00069498	chr5	+	695	4	FSM	ENSG00000249915.9	ENST00000505221.5	672	4	-23	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	361.36254494467	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGTCTCTGGTTCTATA	0	True	NA	1	True	NA	NA	NA	271623	314806	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_271822_272710_272773_304176_304222_314416
H1_mix_00069499	chr5	+	1126	6	FSM	ENSG00000249915.9	ENST00000264933.9	1110	6	-16	0	5	0	multi-exon	FALSE	canonical	3	535	junction_4	100.246895213767	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGCCTTCAGCTTTTCA	6	False	NA	24	True	AATAAA	-18	NA	271629	314974	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_271822_272710_272773_304176_304222_306601_306761_311292_311403_314416
H1_mix_00069500	chr5	+	1082	5	NIC	ENSG00000249915.9	novel	1110	6	NA	NA	-9	0	intron_retention	FALSE	canonical	3	30	junction_1	297.619303809414	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGCCTTCAGCTTTTCA	228	False	NA	24	True	AATAAA	-18	NA	271611	314974	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_271822_304176_304222_306601_306761_311292_311403_314416
H1_mix_00069501	chr5	+	940	4	FSM	ENSG00000249915.9	ENST00000618970.4	931	4	-9	0	-9	0	multi-exon	FALSE	canonical	3	48	junction_2	347.39059029027	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGCCTTCAGCTTTTCA	228	False	NA	24	True	AATAAA	-18	NA	271611	314974	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_271822_272710_272773_311292_311403_314416
H1_mix_00069502	chr5	+	1201	3	FSM	ENSG00000249915.9	ENST00000509581.5	1156	3	-45	0	-9	0	multi-exon	FALSE	canonical	3	51	junction_2	383	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTTTGATCCCTTTT	228	False	NA	13	True	AATAAA	-14	NA	271611	276940	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_271822_272710_272773_276011
H1_mix_00069503	chr5	+	1106	6	FSM	ENSG00000249915.9	ENST00000507528.5	1088	6	-33	15	0	0	multi-exon	FALSE	canonical	3	126	junction_4	262.262921511982	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGGAATGTTAGACGTGT	0	True	NA	4	True	AAAAAG	-40	NA	271623	314954	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_271822_272710_272773_304176_304222_306601_306755_311292_311403_314416
H1_mix_00069504	chr5	+	3763	2	FSM	ENSG00000249915.9	ENST00000512466.1	3763	2	0	0	0	0	multi-exon	FALSE	canonical	3	748	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTGCCTTCAGCTTTTC	3974	False	NA	23	True	AATAAA	-17	NA	308196	314973	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_311403_314416
H1_mix_00069505	chr5	+	217	2	FSM	ENSG00000063438.20	ENST00000510910.1	569	2	352	0	352	0	multi-exon	FALSE	canonical	1	2	junction_1	0	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCATCTGCCGTGTGCGC	1806	False	NA	NA	False	NA	NA	NA	422728	423927	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_422859_423840
H1_mix_00069506	chr5	+	2792	13	FSM	ENSG00000180104.16	ENST00000512944.6	2801	13	4	5	4	0	multi-exon	FALSE	canonical	3	119	junction_1	31.1884950297738	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATGAAAACGCCATGCA	-3	True	NA	6	True	ATTAAA	-19	NA	443179	467285	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_443291_446149_446350_447532_447753_453369_454052_456888_457007_457899_458026_459358_459460_461959_462071_462156_462308_464289_464413_465110_465273_465717_465846_466726
H1_mix_00069507	chr5	+	1028	2	NNC	ENSG00000225138.8	novel	1357	7	NA	NA	0	-932	at_least_one_novel_splicesite	TRUE	canonical	3	15	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCTGCGGAGAGGGGTTA	-22	True	NA	NA	False	NA	NA	NA	473235	474365	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_474208_474309
H1_mix_00069508	chr5	+	1195	2	FSM	ENSG00000225138.8	ENST00000658086.1	460	2	-512	-223	0	223	multi-exon	FALSE	canonical	3	20	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCCTCCCTTAGCCACGA	-22	True	NA	NA	False	NA	NA	NA	473235	475520	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_474047_475136
H1_mix_00069509	chr5	+	1963	6	NIC	ENSG00000225138.8	novel	1357	7	NA	NA	-371	0	intron_retention	FALSE	canonical	3	14	junction_1	29.7159889621732	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACAAACTCTTTTTTTTA	1655	False	NA	21	True	AATAAA	-22	NA	474912	480884	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_475320_476231_476564_477243_477466_477805_477850_479781_480217_480361
H1_mix_00069510	chr5	+	4036	4	NIC	ENSG00000225138.8	novel	1357	7	NA	NA	400	0	intron_retention	FALSE	canonical	3	32	junction_1	28.6472802664872	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACAAACTCTTTTTTTTA	2426	False	NA	21	True	AATAAA	-22	NA	475683	480884	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_476564_477243_477466_477805_480217_480361
H1_mix_00069512	chr5	+	1440	4	FSM	ENSG00000225138.8	ENST00000667376.1	1440	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	29.3295452099452	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTATAAGTGTCACATGT	3716	False	NA	-33	True	NA	NA	NA	476973	480830	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_477466_477805_477850_479781_480217_480361
H1_mix_00069514	chr5	+	2762	1	FSM	ENSG00000225138.8	ENST00000534918.1	2762	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACAAACTCTTTTTTTTA	4865	False	NA	21	True	AATAAA	-22	NA	478122	480884	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_478100_480900
H1_mix_00069516	chr5	+	2375	12	FSM	ENSG00000112877.8	ENST00000264935.6	2366	12	-9	0	-9	0	multi-exon	FALSE	canonical	3	78	junction_9	15.0453858828425	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAACTTTTTCAGTGGCTG	-15	True	NA	17	True	AATAAA	-21	NA	612330	653553	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_612444_618989_619118_620068_620262_624470_624580_633768_633948_635371_635585_637516_637819_639088_639225_640407_640605_644298_644426_647804_647917_652987
H1_mix_00069517	chr5	+	2479	4	NNC	ENSG00000112877.8	novel	656	3	NA	NA	-1915	227	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	42.9909551210743	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGTAGTTCTGAAAATTAT	NA	False	NA	NA	False	NA	NA	NA	642222	653780	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_643670_644298_644426_647804_647917_652987
H1_mix_00069519	chr5	+	307	1	FSM	ENSG00000271781.1	ENST00000607068.1	791	1	472	12	472	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCGGACAGGACGGGGCTC	3250	False	NA	-3	True	AATAAA	-14	NA	676297	676604	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_676300_676600
H1_mix_00069520	chr5	+	949	2	FSM	ENSG00000288930.1	ENST00000686940.1	1104	2	29	126	29	-110	multi-exon	FALSE	canonical	3	31	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTGGTGTGTTCTTAC	-9	True	NA	NA	False	AAGAAA	-14	NA	784853	786160	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_785055_785412
H1_mix_00069521	chr5	+	1657	9	FSM	ENSG00000071539.14	ENST00000512024.5	1452	9	-30	-175	-30	175	multi-exon	FALSE	canonical	3	350	junction_3	37.0790961998806	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGAATGGCTGTCCCCTG	-34	True	NA	NA	False	NA	NA	NA	892853	909107	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_893091_894786_894953_896664_896795_900493_900550_901340_901432_904147_904221_907129_907194_907987_908075_908354
H1_mix_00069522	chr5	+	2431	13	FSM	ENSG00000071539.14	ENST00000166345.8	2431	13	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_3	30.7411911502032	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAAGCCTGATTTATGGT	-4	True	NA	88	True	ACTAAA	-23	NA	892883	918120	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_893091_894786_894953_896664_896795_900493_900550_901340_901432_904147_904221_907129_907194_907987_908075_908354_908462_911842_911997_914464_914578_915903_915974_917007
H1_mix_00069524	chr5	+	2095	10	FSM	ENSG00000145506.14	ENST00000296849.10	2182	10	-14	101	-14	-101	multi-exon	FALSE	canonical	3	16	junction_8	4.29469957557504	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCCGGTGGGGGGAAGCA	208	False	NA	NA	False	NA	NA	NA	1008787	1038842	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_1009083_1009178_1009215_1009480_1009561_1032151_1032213_1033371_1033500_1034234_1034331_1034755_1034904_1035388_1035474_1036256_1036385_1037804
H1_mix_00069526	chr5	+	2465	1	FSM	ENSG00000248126.1	ENST00000509920.1	121	1	-2052	-292	-2052	292	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGAAGGCTTTGCTGCT	NA	False	NA	NA	False	NA	NA	NA	1596074	1598539	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_1596100_1598500
H1_mix_00069527	chr5	+	274	2	FSM	ENSG00000145494.12	ENST00000510329.1	260	2	-14	0	0	0	multi-exon	FALSE	canonical	1	11	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCCGTAAAAGTCACACAT	1	True	NA	NA	False	NA	NA	NA	1801406	1802279	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_1801550_1802148
H1_mix_00069528	chr5	+	518	4	FSM	ENSG00000145494.12	ENST00000274137.10	518	4	0	0	0	0	multi-exon	FALSE	canonical	3	2761	junction_3	121.658903861941	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTGTAAGTTTGTTTCT	1	True	NA	30	True	AATAAA	-22	NA	1801406	1816048	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_1801550_1802320_1802375_1814338_1814462_1815850
H1_mix_00069529	chr5	+	996	2	FSM	ENSG00000186493.14	ENST00000649739.1	387	2	-314	-295	-314	0	multi-exon	FALSE	canonical	3	59	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTAAGCGACTCCTGATC	1457	False	NA	-9	True	AAGAAA	-26	NA	2751816	2755376	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_2752465_2755028
H1_mix_00069530	chr5	+	905	4	FSM	ENSG00000186493.14	ENST00000647681.1	890	4	-17	2	0	-2	multi-exon	FALSE	canonical	2	8	junction_3	5.35412613473634	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTCTCATTGTGGTTCCT	8	True	NA	10	True	AATAAA	-19	NA	2752130	2755395	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_2752465_2752621_2752755_2753284_2753356_2755028
H1_mix_00069531	chr5	+	1459	3	FSM	ENSG00000186493.14	ENST00000515640.5	1441	3	-18	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	2.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGTCGACTCTTACTAC	-17	True	NA	13	True	AATAAA	-22	NA	2752227	2754373	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_2752465_2752621_2752755_2753284
H1_mix_00069532	chr5	+	681	3	FSM	ENSG00000186493.14	ENST00000397835.4	681	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	6.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTAAGCGACTCCTGATC	20	True	NA	-9	True	AAGAAA	-26	NA	2752264	2755376	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_2752465_2752621_2752755_2755028
H1_mix_00069533	chr5	+	2080	4	FSM	ENSG00000170549.4	ENST00000302006.4	2080	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	8.17856276425687	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCCTCCCCGCTCCTGCTG	0	True	NA	9	True	AATAAA	-16	NA	3595831	3601403	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_3596382_3599224_3600261_3600608_3600682_3600982
H1_mix_00069534	chr5	+	4996	23	FSM	ENSG00000145536.15	ENST00000274181.7	4979	23	-17	0	-17	0	multi-exon	TRUE	canonical	3	10	junction_19	4.39571541954058	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGAACTACCTCATGAT	12	False	NA	14	True	AATAAA	-20	NA	5140312	5320304	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_5140540_5140663_5140767_5146129_5146456_5182043_5182306_5186051_5186252_5187724_5187809_5189970_5190131_5191684_5191791_5200131_5200270_5209092_5209247_5222788_5222885_5232367_5232517_5235013_5235187_5236968_5237100_5239150_5239275_5239680_5239926_5242052_5242192_5262656_5262784_5303267_5303470_5303571_5303767_5306503_5306729_5318133_5318282_5319022
H1_mix_00069535	chr5	+	7947	19	FSM	ENSG00000164151.12	ENST00000296564.9	7930	19	-17	0	-17	0	multi-exon	FALSE	canonical	3	188	junction_9	37.5629923603236	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACTGTTCTGATTATTA	NA	False	NA	18	True	AATAAA	-21	NA	5422659	5490220	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_5423000_5436417_5436477_5437079_5437115_5439894_5439914_5441111_5441224_5443167_5443245_5444288_5444327_5447426_5447510_5447720_5447761_5447840_5447898_5454551_5454639_5457331_5457742_5460435_5465227_5466333_5466503_5468827_5468989_5473557_5473749_5475972_5476080_5486720_5486820_5489148
H1_mix_00069538	chr5	+	1765	2	FSM	ENSG00000215218.4	ENST00000399816.4	5895	2	0	4130	0	-4130	multi-exon	FALSE	canonical	3	8	junction_1	0	162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACTGCCTCAAGGATCCA	-4	True	NA	3	True	AATAAA	-16	NA	6448858	6492593	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_6449248_6491217
H1_mix_00069540	chr5	+	9092	4	FSM	ENSG00000145545.12	ENST00000513117.1	1467	4	-57	-7568	-57	2154	multi-exon	FALSE	canonical	2	6	junction_1	55.4276304943863	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTCTCTCGGCTGAAT	-19	True	NA	4	True	AATAAA	-24	NA	6633369	6676540	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_6633870_6656077_6656180_6662815_6662967_6668201
H1_mix_00069541	chr5	+	7048	5	FSM	ENSG00000145545.12	ENST00000274192.7	7035	5	-13	0	0	0	multi-exon	FALSE	canonical	3	105	junction_2	8.38152730712011	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCGTTTTGCTCATTGGAT	-17	True	NA	35	True	ATTAAA	-30	NA	6633426	6674386	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_6633870_6651841_6652009_6656077_6656180_6662815_6662967_6668201
H1_mix_00069542	chr5	+	5030	13	FSM	ENSG00000112941.14	ENST00000230859.8	5030	13	0	0	0	0	multi-exon	TRUE	canonical	3	44	junction_6	14.5914263258333	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGTTTGTGTCCAAG	-15	True	NA	13	True	AATAAA	-13	NA	6713431	6757044	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_6714700_6737509_6737634_6738682_6738730_6739731_6739853_6742489_6742598_6743711_6743841_6746213_6746428_6748463_6748591_6749556_6749658_6750330_6750504_6751038_6751198_6752872_6753038_6754750
H1_mix_00069543	chr5	+	6993	1	Intergenic	novelGene_1135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCGGATCGGGGGACCT	NA	False	NA	-71	True	NA	NA	NA	7262350	7269343	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_7262400_7269300
H1_mix_00069544	chr5	+	2081	3	NNC	ENSG00000285689.1	novel	536	3	NA	NA	-1436	-2994	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	2.5	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTTCAGGTTCCTTTTA	6747	False	NA	31	True	NA	NA	NA	7271355	7273929	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_7271629_7271719_7272921_7273322
H1_mix_00069545	chr5	+	5926	25	FSM	ENSG00000078295.17	ENST00000338316.9	6645	25	0	719	0	-719	multi-exon	FALSE	canonical	3	209	junction_19	118.379656426075	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGATTAGCAGTTGAGGC	18	True	NA	NA	False	NA	NA	NA	7396137	7829362	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_7396507_7414572_7414771_7520737_7520900_7626166_7626317_7690690_7690840_7695751_7695864_7698246_7698375_7706743_7706903_7707705_7707839_7709210_7709388_7712855_7712900_7717156_7717238_7724544_7724615_7727163_7727262_7743667_7743753_7757448_7757587_7766686_7766807_7772931_7773102_7784364_7784450_7789641_7789801_7802217_7802365_7804584_7804693_7816865_7816981_7820564_7820690_7826718
H1_mix_00069546	chr5	+	9908	5	FSM	ENSG00000078295.17	ENST00000489501.1	9908	5	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_1	24.3246274380513	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACAGTGCCTGTATCTTT	NA	False	NA	17	True	ATTAAA	-18	NA	7793618	7827532	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_7802365_7804584_7804693_7816865_7816981_7820564_7820690_7826718
H1_mix_00069548	chr5	+	3245	15	FSM	ENSG00000124275.15	ENST00000440940.7	3245	15	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_3	40.2307756092578	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCTTAAAACTTGGTAAG	-19	True	NA	6	True	AATAAA	-19	NA	7869147	7901113	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_7869216_7870769_7870924_7873372_7873527_7875257_7875376_7877943_7878323_7883154_7883278_7885700_7885855_7886614_7886704_7889094_7889276_7891371_7891415_7892726_7892914_7895733_7895853_7896863_7896957_7897064_7897248_7899913
H1_mix_00069549	chr5	+	3230	15	FSM	ENSG00000124275.15	ENST00000264668.6	3274	15	44	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	55.651246387568	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTAAGTTTTTGTGGCT	-19	True	NA	17	True	AATAAA	-30	NA	7869147	7901124	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_7869190_7870769_7870924_7873372_7873527_7875257_7875376_7877943_7878323_7883154_7883278_7885700_7885855_7886614_7886704_7889094_7889276_7891371_7891415_7892726_7892914_7895733_7895853_7896863_7896957_7897064_7897248_7899913
H1_mix_00069550	chr5	+	3076	14	FSM	ENSG00000124275.15	ENST00000511461.5	3076	14	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	51.1485827251636	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTAAGTTTTTGTGGCT	-19	True	NA	17	True	AATAAA	-30	NA	7869147	7901124	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_7869190_7870769_7870924_7875257_7875376_7877943_7878323_7883154_7883278_7885700_7885855_7886614_7886704_7889094_7889276_7891371_7891415_7892726_7892914_7895733_7895853_7896863_7896957_7897064_7897248_7899913
H1_mix_00069551	chr5	+	3089	14	NIC	ENSG00000124275.15	novel	3076	14	NA	NA	13	0	intron_retention	FALSE	canonical	3	141	junction_2	29.4578226216648	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTAAGTTTTTGTGGCT	-6	True	NA	17	True	AATAAA	-30	NA	7869160	7901124	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_7869216_7870769_7870924_7875257_7875376_7877943_7878323_7883154_7883278_7885700_7885855_7886614_7886704_7889094_7889276_7891371_7891415_7892726_7892914_7895733_7895853_7896863_7896957_7897064_7897248_7899913
H1_mix_00069552	chr5	+	2965	13	NIC	ENSG00000124275.15	novel	3245	15	NA	NA	2	0	intron_retention	FALSE	canonical	3	21	junction_6	56.4306358874917	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTAAGTTTTTGTGGCT	29	True	NA	17	True	AATAAA	-30	NA	7869195	7901124	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_7869216_7870769_7870924_7875257_7875376_7877943_7878323_7883154_7883278_7885700_7885855_7889094_7889276_7891371_7891415_7892726_7892914_7895733_7895853_7896863_7896957_7897064_7897248_7899913
H1_mix_00069554	chr5	+	3091	13	FSM	ENSG00000124275.15	ENST00000510525.5	3091	13	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	62.4773292216198	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAAACTTGGTAAGTTT	1603	False	NA	9	True	AATAAA	-22	NA	7870769	7901116	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_7870924_7873372_7873527_7875257_7875376_7877943_7878323_7883154_7883278_7885700_7885855_7889094_7889276_7891371_7891415_7892726_7892914_7895733_7895853_7896863_7896957_7897064_7897248_7899913
H1_mix_00069558	chr5	+	1952	3	FSM	ENSG00000250786.3	ENST00000508179.2	1919	3	29	-62	29	62	multi-exon	FALSE	canonical	3	44	junction_2	33	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATGAAAAGATGATTAAGT	19	False	NA	NA	False	NA	NA	NA	9546224	9550787	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_9546531_9548989_9549150_9549301
H1_mix_00069559	chr5	+	847	2	FSM	ENSG00000250786.3	ENST00000655411.1	436	2	0	-411	0	411	multi-exon	FALSE	canonical	3	110	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAACGTCTTTAGGGTTCT	-25	True	NA	NA	False	NA	NA	NA	9546284	9549590	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_9546531_9548989
H1_mix_00069560	chr5	+	1728	10	FSM	ENSG00000150753.12	ENST00000515390.5	1728	10	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_2	1175.56161519127	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCACTTGTTCAAAGCT	5	False	NA	20	True	AATAAA	-21	NA	10250215	10264925	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_10250446_10254144_10254206_10255954_10256154_10258110_10258304_10258385_10258536_10260791_10260912_10261559_10261746_10262480_10262619_10263133_10263315_10264655
H1_mix_00069562	chr5	+	1997	11	FSM	ENSG00000150753.12	ENST00000515676.5	1997	11	0	0	0	0	multi-exon	FALSE	canonical	2	152	junction_1	1147.78449196702	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAGCTGTTTGGTAAC	231	False	NA	-3	True	NA	NA	NA	10250536	10264902	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_10250894_10254144_10254206_10254673_10254839_10255954_10256154_10258110_10258304_10258385_10258536_10260791_10260912_10261559_10261746_10262480_10262619_10263133_10263315_10264655
H1_mix_00069563	chr5	+	1091	3	FSM	ENSG00000150753.12	ENST00000511995.1	1091	3	0	0	0	0	multi-exon	FALSE	canonical	3	3938	junction_2	119	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATAGTTTCACTTGTTCAA	3743	False	NA	16	True	AATAAA	-17	NA	10261974	10264921	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_10262619_10263133_10263315_10264655
H1_mix_00069566	chr5	+	4746	25	FSM	ENSG00000145495.16	ENST00000511802.5	4734	25	-12	0	0	0	multi-exon	TRUE	canonical	3	150	junction_1	33.0213525195777	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTACTGCCTGATTTTT	-21	True	NA	12	True	NA	NA	NA	10353702	10434285	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_10353918_10377797_10377895_10378758_10378833_10381799_10381944_10386993_10387067_10390331_10390501_10391541_10391732_10394081_10394144_10394752_10394786_10397292_10397345_10400783_10402140_10402383_10402453_10402532_10402608_10403406_10403542_10405557_10405678_10407101_10407203_10410138_10410277_10411332_10411538_10414432_10414503_10415487_10415670_10417269_10417405_10423734_10423825_10426389_10426523_10429892_10430029_10433593
H1_mix_00069568	chr5	+	1024	5	FSM	ENSG00000145491.12	ENST00000274134.5	1061	5	34	3	34	-1	multi-exon	FALSE	canonical	0	0	junction_1	2.8613807855649	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACACCTCTGTAGTGTGAG	11	True	NA	NA	False	AATACA	-15	NA	10441912	10465023	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_10442299_10448259_10448384_10449951_10450114_10461183_10461360_10464847
H1_mix_00069572	chr5	+	5156	1	NIC	ENSG00000248131.6	novel	1262	2	NA	NA	529	-1029	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTATTTTTGTTACTTC	NA	False	NA	NA	False	NA	NA	NA	12649492	12654648	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_12649500_12654600
H1_mix_00069573	chr5	+	11483	57	FSM	ENSG00000038382.21	ENST00000344204.9	11460	57	-23	0	-23	0	multi-exon	FALSE	canonical	1	1	junction_44	6.11181421176918	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTGTTAGGCTTTTTA	7	False	NA	14	True	ATTAAA	-14	NA	14143318	14510204	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_14143883_14270824_14270900_14280321_14280437_14286870_14287064_14290715_14291229_14293011_14293135_14297071_14297264_14304460_14304593_14316512_14316744_14330777_14330901_14336535_14336728_14358177_14358348_14359356_14359532_14363731_14363928_14364649_14364817_14366859_14366980_14368707_14368900_14369373_14369524_14374228_14374344_14378011_14378128_14381129_14381253_14387437_14387633_14387731_14387848_14388612_14388680_14389288_14389399_14390230_14390301_14390900_14390991_14394037_14394131_14397042_14397155_14398879_14399071_14400962_14401065_14405847_14405991_14406572_14406673_14419777_14420022_14461018_14461312_14462754_14462926_14465544_14465641_14471317_14471467_14472591_14472659_14473993_14474098_14476893_14476964_14479260_14479351_14479918_14480012_14481233_14481285_14481540_14481619_14482581_14482774_14485068_14485247_14487463_14488261_14492566_14492815_14496878_14497018_14497846_14497875_14498088_14498252_14498518_14498641_14502578_14502658_14504392_14504594_14507121_14507261_14507879
H1_mix_00069574	chr5	+	5191	30	ISM	ENSG00000038382.21	ENST00000512070.6	8907	57	-266	109184	-131	92	5prime_fragment	FALSE	canonical	2	8	junction_1	5.89604756868731	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAATATAAGTGCATGAG	64	False	NA	NA	False	AATAAA	-4	NA	14143570	14399492	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_14143883_14270824_14270900_14280321_14280437_14286870_14287064_14290715_14291229_14293011_14293135_14297071_14297264_14304460_14304593_14316512_14316744_14330777_14330901_14336535_14336728_14358177_14358348_14359356_14359532_14363731_14363928_14364649_14364817_14366859_14366980_14368707_14368900_14369373_14369524_14374228_14374344_14378011_14378128_14381129_14381253_14387437_14387633_14387731_14387848_14388612_14388680_14389288_14389399_14390230_14390301_14390900_14390991_14394037_14394131_14397042_14397155_14398879
H1_mix_00069577	chr5	+	932	5	FSM	ENSG00000154124.5	ENST00000503023.1	911	5	-21	0	-21	0	multi-exon	FALSE	canonical	3	18	junction_1	38.2687862363049	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCAACCAGGTGGGACAC	10	False	NA	NA	False	NA	NA	NA	14664642	14690270	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_14664978_14678680_14678776_14681463_14681608_14687520_14687647_14690038
H1_mix_00069578	chr5	+	8138	7	FSM	ENSG00000154124.5	ENST00000284274.5	7969	7	-54	-115	0	115	multi-exon	FALSE	canonical	3	83	junction_5	12.347964294661	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCCATTGGAGAGCACGA	-43	True	NA	NA	False	NA	NA	NA	14664663	14699965	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_14664978_14673641_14673719_14678680_14678776_14681463_14681608_14687520_14687647_14690038_14690309_14692853
H1_mix_00069583	chr5	+	1807	2	FSM	ENSG00000176788.9	ENST00000322611.4	1807	2	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_1	0	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATAAAGACTATTGGGTT	2	True	NA	4	True	AATAAA	-20	NA	17217630	17276834	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_17217811_17275207
H1_mix_00069585	chr5	+	294	1	FSM	ENSG00000241552.3	ENST00000473445.3	294	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGCAACAATAAATAG	NA	False	NA	NA	False	NA	NA	NA	18547311	18547605	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_18547300_18547600
H1_mix_00069586	chr5	+	1305	4	FSM	ENSG00000183666.18	ENST00000685140.1	1644	4	61	278	0	1	multi-exon	FALSE	canonical	2	12	junction_3	6.94422221866655	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTATTTTTATTTATGT	-7	True	NA	NA	False	AATAAA	-22	NA	21459512	21474439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_21459585_21459677_21459744_21461782_21461867_21473356
H1_mix_00069590	chr5	+	1335	4	FSM	ENSG00000250337.8	ENST00000659860.1	1325	4	-10	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	14.3836326735943	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTAGCCTAATGTCATT	-18	True	NA	NA	False	AATAAA	-28	NA	27472269	27485686	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_27472520_27475534_27475696_27477638_27477802_27484925
H1_mix_00069593	chr5	+	952	4	FSM	ENSG00000250337.8	ENST00000659077.1	971	4	19	0	-3	0	multi-exon	FALSE	canonical	1	3	junction_3	21.2289111041209	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTCATTTTGTAATTA	1	True	NA	NA	False	AATAAA	-26	NA	27472288	27496404	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_27472520_27475534_27475696_27484925_27485030_27495948
H1_mix_00069596	chr5	+	8388	12	FSM	ENSG00000113361.13	ENST00000265071.3	8540	12	81	71	-2	-71	multi-exon	FALSE	canonical	2	4	junction_5	4.5144396428855	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTTTTGCAAATCAATTT	6	True	NA	NA	False	AGTAAA	-3	NA	31193766	31329075	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_31193887_31267345_31267702_31293961_31294257_31297288_31297409_31299463_31299632_31302110_31302299_31305173_31305428_31313317_31313455_31316207_31316330_31317374_31317493_31317672_31317925_31322817
H1_mix_00069600	chr5	+	3127	9	FSM	ENSG00000082213.18	ENST00000510659.5	3117	9	-10	0	-10	0	multi-exon	FALSE	canonical	3	20	junction_3	90.960156112443	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAAGGTTTGTTTAATTC	NA	False	NA	25	True	AATAAA	-18	NA	31532276	31554808	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_31532474_31534271_31534418_31535743_31535894_31538483_31538690_31540948_31541012_31541280_31541403_31545645_31545713_31551292_31551433_31552772
H1_mix_00069605	chr5	+	381	4	FSM	ENSG00000133401.16	ENST00000509256.1	498	4	117	0	117	0	multi-exon	FALSE	canonical	3	8	junction_2	1.88561808316413	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACCCACACACATGAGCAG	NA	False	NA	NA	False	NA	NA	NA	32052610	32057949	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_32052731_32053768_32053884_32057654_32057729_32057877
H1_mix_00069606	chr5	+	802	1	FSM	ENSG00000272086.1	ENST00000606994.1	802	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGGCTGTGGCTAAAGA	67	False	NA	23	True	AATAAA	-20	NA	32174470	32175272	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_32174500_32175300
H1_mix_00069610	chr5	+	3449	5	FSM	ENSG00000113387.12	ENST00000265073.9	3449	5	0	0	0	0	multi-exon	FALSE	canonical	3	3967	junction_4	143.147651046044	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTGTGTTATCCCGGTT	-8	True	NA	26	True	AATAAA	-14	NA	32585556	32604079	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_32585626_32588511_32588585_32591562_32591686_32598960_32599070_32601004
H1_mix_00069611	chr5	+	785	6	FSM	ENSG00000113387.12	ENST00000515355.5	771	6	-14	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	2022.0275566866	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTGCCCACCACCTAG	-8	True	NA	-31	True	ATTAAA	-42	NA	32585556	32601282	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_32585626_32586368_32586502_32588511_32588585_32591562_32591686_32598960_32599070_32601004
H1_mix_00069612	chr5	+	1660	6	FSM	ENSG00000113387.12	ENST00000511615.5	1658	6	-2	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	1989.4890399296	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAATTATATGTAGCCAG	-8	True	NA	40	True	NA	NA	NA	32585556	32601988	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_32585626_32588511_32588585_32591562_32591686_32594570_32594873_32598960_32599070_32601004
H1_mix_00069617	chr5	+	3024	19	FSM	ENSG00000113407.14	ENST00000265112.8	2672	19	-347	-5	-78	0	multi-exon	FALSE	canonical	3	1294	junction_9	190.44275897089	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCAAGACTGCTCTGTCC	NA	False	NA	17	True	AATAAA	-21	NA	33440617	33468091	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_33441144_33445323_33445405_33448540_33448732_33453288_33453413_33454944_33455067_33455586_33455705_33456001_33456067_33456148_33456228_33457256_33457404_33458565_33458665_33459694_33459862_33460901_33461065_33461157_33461296_33461666_33461745_33461905_33462007_33462098_33462204_33463752_33463826_33466870_33466986_33467559
H1_mix_00069618	chr5	+	2481	18	FSM	ENSG00000113407.14	ENST00000508361.5	2481	18	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_2	407.182793091284	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAAGTTTCAAGACTGCT	-12	True	NA	11	True	AATAAA	-15	NA	33440963	33468085	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_33441144_33445323_33445405_33453288_33453413_33454944_33455067_33455586_33455705_33456001_33456067_33456148_33456228_33457256_33457404_33458565_33458665_33459694_33459862_33460901_33461065_33461157_33461296_33461666_33461745_33461905_33462007_33462098_33462204_33463752_33463826_33466870_33466986_33467559
H1_mix_00069619	chr5	+	633	5	FSM	ENSG00000113407.14	ENST00000504698.1	633	5	0	0	0	0	multi-exon	FALSE	canonical	3	1294	junction_3	342.462771699348	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGCATTTAAACGCAACA	6562	False	NA	3	True	ATTAAA	-19	NA	33456033	33459969	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_33456067_33456148_33456228_33457256_33457404_33458565_33458665_33459694
H1_mix_00069624	chr5	+	4986	18	FSM	ENSG00000039560.14	ENST00000265109.8	4986	18	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_10	92.5067658612266	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGTGTTGATTTTTGG	11	True	NA	17	True	AATAAA	-17	NA	34656327	34832612	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_34656476_34686871_34686956_34757467_34757599_34795938_34796028_34803711_34803777_34807799_34807858_34808583_34808655_34811011_34811119_34811766_34811946_34812179_34812209_34813573_34813661_34814582_34814670_34818796_34818852_34821731_34821851_34822955_34824492_34826329_34826480_34829731_34829798_34830687
H1_mix_00069626	chr5	+	5064	18	FSM	ENSG00000039560.14	ENST00000428746.6	5064	18	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	186.255656424639	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGGTGTTGATTTTTG	-4	True	NA	16	True	AATAAA	-16	NA	34656469	34832611	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_34656697_34686871_34686956_34757467_34757599_34795938_34796028_34803711_34803777_34807799_34807858_34808583_34808655_34811011_34811119_34811766_34811946_34812179_34812209_34813573_34813661_34814582_34814670_34818796_34818852_34821731_34821851_34822955_34824492_34826329_34826480_34829731_34829798_34830687
H1_mix_00069628	chr5	+	969	7	FSM	ENSG00000205838.14	ENST00000610313.1	973	7	0	4	0	1	multi-exon	FALSE	canonical	0	0	junction_2	1.95078331845327	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATATGATCAATGCATAA	1252	False	NA	NA	False	AAAACA	-3	NA	34840671	34880309	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_34840740_34845486_34845674_34850184_34850309_34862897_34863055_34864436_34864563_34866891_34867070_34880180
H1_mix_00069629	chr5	+	2360	3	FSM	ENSG00000113460.13	ENST00000510834.1	2380	3	-6	26	0	-26	multi-exon	FALSE	canonical	3	1168	junction_2	63.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGCATCGCAAAAAAAAAAAA	-12	True	NA	NA	False	NA	NA	NA	34915709	34921899	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_34915898_34918363_34918476_34919839
H1_mix_00069630	chr5	+	1592	10	FSM	ENSG00000113460.13	ENST00000336767.6	1591	10	-1	0	0	0	multi-exon	FALSE	canonical	3	1152	junction_9	58.1587864767177	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGGCTGTGTTGAAAGC	-12	True	NA	NA	False	ATTAAA	-28	NA	34915709	34925996	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_34915898_34918363_34918476_34919839_34919884_34922216_34922288_34922538_34922589_34922694_34922769_34923000_34923052_34923132_34923235_34924846_34924976_34925225
H1_mix_00069632	chr5	+	6117	12	FSM	ENSG00000168724.17	ENST00000648817.1	6107	12	-10	0	-10	0	multi-exon	FALSE	canonical	3	236	junction_8	24.2330284822489	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGCTTCTGCAGTCTAT	3	True	NA	8	True	AATAAA	-18	NA	34929548	34958964	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_34929917_34933814_34933909_34935709_34935834_34936143_34936267_34937325_34937631_34938857_34939010_34941095_34941184_34944866_34945026_34945760_34945804_34950169_34950343_34953925_34954002_34954552
H1_mix_00069633	chr5	+	6208	13	FSM	ENSG00000168724.17	ENST00000382021.2	6208	13	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_9	78.5550054986243	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGCTTCTGCAGTCTAT	-36	True	NA	8	True	AATAAA	-18	NA	34929592	34958964	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_34929917_34933814_34933909_34935709_34935834_34936143_34936267_34937325_34937631_34938857_34939010_34941095_34941184_34944866_34945026_34945760_34945804_34949542_34949678_34950169_34950343_34953925_34954002_34954552
H1_mix_00069634	chr5	+	2516	3	FSM	ENSG00000168724.17	ENST00000512136.1	2516	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	112.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTCCTTATATTGAGCAAA	9615	False	NA	NA	False	AATAAA	-5	NA	34945760	34952743	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_34945804_34950169_34950343_34950443
H1_mix_00069637	chr5	+	4051	9	FSM	ENSG00000145604.17	ENST00000677911.1	3294	9	-27	-730	-3	417	multi-exon	FALSE	canonical	3	58	junction_2	227.784403274236	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTATAGCAACATGATTTA	-47	True	NA	NA	False	AATAAA	-18	NA	36152079	36184736	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_36152271_36152770_36153043_36166518_36166663_36168312_36168448_36170343_36170443_36171602_36171734_36176964_36177017_36177184_36177293_36181817
H1_mix_00069638	chr5	+	3303	9	FSM	ENSG00000145604.17	ENST00000620197.5	3299	9	-4	0	-3	0	multi-exon	FALSE	canonical	3	25	junction_4	236.944481893966	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACACATTTTTATAAAAATG	-47	True	NA	-1	True	TTTAAA	-8	NA	36152079	36184011	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_36152271_36152770_36153043_36163644_36163757_36166518_36166663_36170343_36170443_36171602_36171734_36176964_36177017_36177184_36177293_36181817
H1_mix_00069640	chr5	+	3719	10	FSM	ENSG00000145604.17	ENST00000274255.11	3715	10	-4	0	0	0	multi-exon	FALSE	canonical	3	479	junction_9	86.5778747432722	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTACATATGTATACATGTG	-20	True	NA	NA	False	TTTAAA	-45	NA	36152106	36184319	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_36152271_36152770_36153043_36163644_36163757_36166518_36166663_36168312_36168448_36170343_36170443_36171602_36171734_36176964_36177017_36177184_36177293_36181817
H1_mix_00069644	chr5	+	3940	10	FSM	ENSG00000079215.15	ENST00000265113.9	3919	10	-21	0	-11	0	multi-exon	FALSE	canonical	3	62	junction_3	9.27095557555696	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTTGCACGTTGTTGTT	376	False	NA	18	True	AATAAA	-23	NA	36606584	36688334	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_36606736_36608328_36608605_36629449_36629588_36671028_36671234_36674048_36674092_36676891_36677185_36679626_36679861_36680394_36680590_36683863_36683999_36686064
H1_mix_00069645	chr5	+	6683	7	FSM	ENSG00000079215.15	ENST00000624112.2	6683	7	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_6	8.11719710792395	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACATCTTTGCACGTTGT	6899	False	NA	14	True	AATAAA	-19	NA	36667716	36688330	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_36671234_36674048_36674092_36676891_36677185_36679626_36679861_36680394_36680590_36683863_36683999_36686064
H1_mix_00069646	chr5	+	10430	46	FSM	ENSG00000164190.19	ENST00000448238.2	8729	46	-72	-1629	-51	317	multi-exon	FALSE	canonical	3	28	junction_1	29.7991962771722	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTGTATGCTTCAATTT	701	False	NA	NA	False	TATAAA	-17	NA	36876717	37065819	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_36877179_36953617_36953761_36955471_36955638_36958103_36958232_36961483_36961584_36962122_36962275_36970875_36971037_36971944_36972042_36975775_36976403_36984675_36986302_36995621_36995805_37000372_37000571_37000816_37000889_37000988_37001079_37002661_37002766_37003260_37003348_37006356_37006589_37007322_37007475_37008007_37008089_37008622_37008724_37010086_37010226_37014682_37014766_37016037_37016171_37017018_37017163_37019310_37019401_37020458_37020674_37020774_37020878_37022050_37022150_37022243_37022391_37024584_37024720_37026228_37026328_37027358_37027413_37036378_37036488_37038601_37038739_37044346_37044488_37044635_37044730_37045442_37045598_37046108_37046200_37048501_37048676_37049110_37049302_37051778_37051887_37052365_37052567_37057185_37057333_37058890_37059166_37060843_37061019_37063789
H1_mix_00069647	chr5	+	10413	47	FSM	ENSG00000164190.19	ENST00000282516.13	10425	47	-6	18	-6	-18	multi-exon	FALSE	canonical	3	28	junction_1	29.6586519125587	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACCACTATGAAAATAACT	1	True	NA	-10	True	NA	NA	NA	36876762	37066395	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_36877179_36953617_36953761_36955471_36955638_36958103_36958232_36961483_36961584_36962122_36962275_36970875_36971037_36971944_36972042_36975775_36976403_36984675_36986302_36995621_36995805_37000372_37000571_37000816_37000889_37000988_37001079_37002661_37002766_37003260_37003348_37006356_37006589_37007322_37007475_37008007_37008089_37008622_37008724_37010086_37010226_37014682_37014766_37016037_37016171_37017018_37017163_37019310_37019401_37020458_37020674_37020774_37020878_37022050_37022150_37022243_37022391_37024584_37024720_37026228_37026328_37027358_37027413_37036378_37036488_37038601_37038739_37044346_37044488_37044635_37044730_37045442_37045598_37046108_37046200_37048501_37048676_37049110_37049302_37051778_37051887_37052365_37052567_37057185_37057333_37058890_37059166_37060843_37061019_37063789_37063979_37064526
H1_mix_00069648	chr5	+	2182	7	FSM	ENSG00000164190.19	ENST00000514335.1	2948	7	766	0	766	0	multi-exon	FALSE	canonical	3	31	junction_6	37.2111094522411	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGTCTGTTTCCATTTG	NA	False	NA	20	True	AATAAA	-20	NA	37051708	37065502	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_37051887_37052365_37052567_37057185_37057333_37058890_37059166_37060843_37061019_37063789_37064020_37064526
H1_mix_00069650	chr5	+	2715	18	FSM	ENSG00000082068.9	ENST00000265107.9	2877	18	0	162	0	-162	multi-exon	FALSE	canonical	3	209	junction_11	19.1088667619861	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGTACCTGGAACACAGTA	-9	True	NA	NA	False	ATTAAA	-28	NA	37379317	37753273	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_37379393_37379488_37379555_37381601_37381686_37391999_37392121_37396374_37396571_37437921_37437982_37443238_37443373_37479833_37479988_37516513_37516591_37605063_37605239_37697654_37697755_37701057_37701143_37702948_37703088_37721114_37721216_37722854_37722935_37724933_37725051_37726882_37727046_37752485
H1_mix_00069651	chr5	+	3660	3	FSM	ENSG00000248587.8	ENST00000514532.3	3660	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	2	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCATGGACAACATTTTCA	6100	False	NA	NA	False	NA	NA	NA	37869906	37875641	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_37872466_37874106_37874267_37874700
H1_mix_00069662	chr5	+	1050	6	FSM	ENSG00000172262.12	ENST00000515326.5	1050	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	49.3906873813273	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAGCGCATGGAAACAGC	NA	False	NA	NA	False	AATAAA	-12	NA	43120882	43161773	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_43121124_43122038_43122178_43123208_43123311_43139164_43139310_43161248_43161607_43161708
H1_mix_00069663	chr5	+	3286	7	FSM	ENSG00000172262.12	ENST00000682664.1	3286	7	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	46.9136322286911	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCATGACTCTTTTTTAA	-8	True	NA	21	True	AGTAAA	-14	NA	43120913	43176322	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_43121124_43122038_43122178_43123208_43123311_43139164_43139310_43161248_43161932_43173317_43173449_43174446
H1_mix_00069665	chr5	+	3232	8	FSM	ENSG00000172262.12	ENST00000505606.6	3209	8	-23	0	-23	0	multi-exon	FALSE	canonical	3	58	junction_1	39.1397287592408	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATGACTCTTTTTTAAAA	9	True	NA	23	True	AGTAAA	-16	NA	43121572	43176324	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_43121829_43122038_43122178_43123208_43123311_43139164_43139310_43161248_43161607_43161708_43161932_43173317_43173449_43174446
H1_mix_00069666	chr5	+	3350	7	FSM	ENSG00000172262.12	ENST00000509634.5	3340	7	-10	0	-8	0	multi-exon	FALSE	canonical	3	106	junction_4	21.694853460364	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAATATGCTATTTTTTT	24	False	NA	16	True	AATAAA	-17	NA	43121587	43176247	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_43122178_43123208_43123311_43139164_43139310_43161248_43161607_43161708_43161932_43173317_43173449_43174446
H1_mix_00069670	chr5	+	6489	22	FSM	ENSG00000112992.18	ENST00000264663.9	6483	22	-18	12	0	-3	multi-exon	FALSE	canonical	3	29	junction_1	17.3147467066296	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTAAATGTATAAGTTTT	12	True	NA	NA	False	AATAAA	-17	NA	43602704	43707393	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_43602891_43609142_43609347_43612907_43613138_43615847_43616066_43619031_43619120_43624031_43624121_43628199_43628388_43644191_43644326_43644610_43644803_43645356_43645511_43649146_43649309_43650476_43650588_43651738_43651885_43653017_43653214_43655839_43656074_43656652_43656814_43659170_43659351_43675510_43675671_43677724_43677807_43700118_43700238_43702620_43702737_43704254
H1_mix_00069671	chr5	+	6377	22	FSM	ENSG00000112992.18	ENST00000344920.9	6421	22	0	44	0	-44	multi-exon	FALSE	canonical	3	61	junction_1	12.5703462737578	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAATATGTTATACACA	-26	True	NA	NA	False	NA	NA	NA	43603179	43707352	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_43603295_43609142_43609347_43612907_43613138_43615847_43616066_43619031_43619120_43624031_43624121_43628199_43628388_43644191_43644326_43644610_43644803_43645356_43645511_43649146_43649309_43650476_43650588_43651738_43651885_43653017_43653214_43655839_43656074_43656652_43656814_43659170_43659351_43675510_43675671_43677724_43677807_43700118_43700238_43702620_43702737_43704254
H1_mix_00069675	chr5	+	339	1	FSM	ENSG00000250017.1	ENST00000505789.1	2023	1	769	915	769	-915	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTACTGCTCAGAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	45575358	45575697	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_45575400_45575700
H1_mix_00069676	chr5	+	7889	26	FSM	ENSG00000151883.19	ENST00000281631.10	7475	26	-414	0	-151	0	multi-exon	TRUE	canonical	3	34	junction_13	18.2829319311756	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACGGTATATGTGGGCAGT	292	False	NA	NA	False	AATAAA	-19	NA	50666222	50846519	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_50667187_50668070_50668126_50750150_50750189_50759642_50759733_50760291_50760363_50761820_50761899_50763147_50763243_50778068_50778130_50778559_50778651_50788522_50788590_50794206_50794333_50794852_50795418_50796981_50797033_50797137_50797234_50815431_50815525_50821212_50821339_50822334_50822401_50824907_50824976_50826754_50826804_50827943_50828057_50828311_50828385_50829891_50829962_50832780_50832855_50833978_50834049_50834930_50835016_50841965
H1_mix_00069678	chr5	+	2893	25	ISM	ENSG00000151883.19	ENST00000505554.5	3825	26	368	1033	32	0	3prime_fragment	FALSE	canonical	3	34	junction_12	17.7998127330973	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTTGTGCTGATATTTT	8	True	NA	18	True	AATAAA	-14	NA	50667924	50842341	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_50668126_50750150_50750189_50759642_50759733_50760291_50760363_50761820_50761899_50763147_50763243_50778068_50778130_50778559_50778651_50788522_50788590_50794206_50794333_50794852_50795418_50796981_50797033_50797137_50797234_50815431_50815525_50821212_50821339_50822334_50822401_50824907_50824976_50826754_50826804_50827943_50828057_50828311_50828385_50829891_50829962_50832780_50832855_50833978_50834049_50834930_50835016_50841965
H1_mix_00069683	chr5	+	7841	30	FSM	ENSG00000164171.11	ENST00000296585.10	7843	30	0	2	0	-2	multi-exon	FALSE	canonical	1	3	junction_24	3.98689887801231	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATTTTACTATTTTTA	-2	True	NA	NA	False	AATAAA	-27	NA	52989351	53094777	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_52989533_53026747_53026869_53042111_53042222_53045000_53045093_53048362_53048478_53048642_53048771_53051410_53051560_53055537_53055689_53055983_53056150_53058024_53058102_53059873_53060013_53060900_53061047_53062785_53062930_53064911_53065116_53065840_53065978_53067117_53067258_53070108_53070261_53071937_53072049_53072612_53072696_53073117_53073260_53074384_53074478_53075060_53075138_53075220_53075305_53078771_53078875_53080510_53080622_53081591_53081697_53083339_53083454_53086951_53087042_53089945_53090063_53090518
H1_mix_00069686	chr5	+	2302	6	FSM	ENSG00000134363.12	ENST00000256759.8	2299	6	-3	0	0	0	multi-exon	FALSE	canonical	3	170	junction_4	35.4141214771735	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTCAATTCCTGATGAT	-2	True	NA	13	True	AATAAA	-38	NA	53480625	53487134	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_53480877_53482879_53483072_53483503_53483723_53484068_53484294_53484996_53485228_53485950
H1_mix_00069689	chr5	+	674	5	FSM	ENSG00000164258.12	ENST00000296684.10	669	5	-6	1	0	-1	multi-exon	FALSE	canonical	3	991	junction_2	55.3466349473931	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATACATTTTGTGGTGTCT	-13	True	NA	24	True	AATAAA	-42	NA	53560632	53683337	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_53560761_53603451_53603531_53646232_53646406_53658550_53658625_53683117
H1_mix_00069690	chr5	+	975	6	FSM	ENSG00000164258.12	ENST00000506974.5	833	6	-135	-7	-121	7	multi-exon	FALSE	canonical	3	58	junction_2	480.399167359811	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGTGTCTATTTTAAA	NA	False	NA	32	True	AATAAA	-26	NA	53560511	53683345	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_53560761_53603451_53603531_53604723_53604896_53646232_53646406_53658550_53658625_53683117
H1_mix_00069691	chr5	+	559	4	FSM	ENSG00000164258.12	ENST00000506765.1	559	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	485.245184302625	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACATTTTGTGGTGTCTA	29	False	NA	25	True	AATAAA	-43	NA	53560674	53683338	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_53560761_53603451_53603531_53646232_53646406_53683117
H1_mix_00069695	chr5	+	3767	4	FSM	ENSG00000164294.14	ENST00000506123.5	3422	4	-119	-226	-118	0	multi-exon	FALSE	canonical	3	73	junction_1	72.7751483833748	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCCTGAAAGTTGTATT	NA	False	NA	9	True	AATAAA	-18	NA	55160048	55167297	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_55160244_55160329_55160397_55160993_55161256_55164054
H1_mix_00069702	chr5	+	1031	5	FSM	ENSG00000155542.12	ENST00000418299.5	1009	5	-22	0	0	0	multi-exon	TRUE	canonical	3	11	junction_1	18.3762754659371	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGTGTCTATGTATAAT	-21	True	NA	NA	False	AGTAAA	-29	NA	56909592	56917348	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_56909744_56913010_56913135_56913873_56913990_56914860_56914967_56916814
H1_mix_00069703	chr5	+	4516	12	FSM	ENSG00000062194.16	ENST00000506184.7	4506	12	-10	0	0	0	multi-exon	FALSE	canonical	1	350	junction_10	217.300911066689	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTATGGTTATTCTATGC	-8	True	NA	9	True	TATAAA	-15	NA	57174048	57264673	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_57174212_57175447_57176401_57214073_57214194_57230845_57230970_57231097_57231322_57235965_57236033_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
H1_mix_00069706	chr5	+	3364	13	NNC	ENSG00000062194.16	novel	2243	12	NA	NA	-97	0	at_least_one_novel_splicesite	FALSE	canonical	1	166	junction_3	325.897851668621	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTTTTCTGTAGTGTT	-10	True	NA	10	True	AATAAA	-17	NA	57173850	57263587	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_57173927_57175447_57176401_57214073_57214194_57221375_57221397_57230845_57230970_57231097_57231322_57235965_57236033_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
H1_mix_00069708	chr5	+	2881	14	NNC	ENSG00000062194.16	novel	2243	12	NA	NA	-56	0	at_least_one_novel_splicesite	FALSE	canonical	1	166	junction_3	354.998458201502	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTCC	31	True	NA	20	True	AATAAA	-23	NA	57173891	57263085	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_57173927_57175447_57176401_57214073_57214194_57221375_57221397_57230845_57230970_57231097_57231322_57235965_57236033_57237112_57237173_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
H1_mix_00069709	chr5	+	4949	13	FSM	ENSG00000062194.16	ENST00000424459.7	4683	13	-116	-150	-116	150	multi-exon	FALSE	canonical	1	216	junction_6	299.364697688659	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTTTTAAAGAGAGCCT	-29	True	NA	NA	False	GATAAA	-14	NA	57173831	57264829	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_57174212_57175447_57176401_57214073_57214194_57230845_57230970_57231097_57231322_57235965_57236033_57237112_57237173_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
H1_mix_00069710	chr5	+	3604	11	FSM	ENSG00000062194.16	ENST00000514387.6	3310	11	-294	0	-193	0	multi-exon	FALSE	canonical	1	50	junction_2	315.489524390272	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTTTTCTGTAGTGTT	NA	False	NA	10	True	AATAAA	-17	NA	57173754	57263587	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_57174212_57175447_57176401_57230845_57230970_57231097_57231322_57235965_57236033_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
H1_mix_00069711	chr5	+	2907	13	NIC	ENSG00000062194.16	novel	4683	13	NA	NA	32	0	combination_of_known_junctions	FALSE	canonical	1	166	junction_3	312.040183932917	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTCC	34	True	NA	20	True	AATAAA	-23	NA	57174090	57263085	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_57174212_57175447_57176401_57214073_57214194_57221375_57221397_57230845_57230970_57231097_57231322_57235965_57236033_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
H1_mix_00069713	chr5	+	8857	5	FSM	ENSG00000152932.8	ENST00000282878.6	8861	5	0	4	0	-4	multi-exon	FALSE	canonical	3	34	junction_1	19.8557296516648	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTCTTAGCCTTAGTC	-11	True	NA	9	True	AATAAA	-21	NA	58583074	58859390	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_58583233_58617642_58617871_58726001_58726121_58825037_58825163_58851163
H1_mix_00069715	chr5	+	632	4	FSM	ENSG00000164182.12	ENST00000296597.10	632	4	0	0	0	0	multi-exon	FALSE	canonical	3	671	junction_2	52.9591037184984	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTTGTATTTTCTGAA	-10	True	NA	28	True	AATAAA	-16	NA	60945204	61153026	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_60945383_61073124_61073215_61098991_61099033_61152703
H1_mix_00069719	chr5	+	7541	20	FSM	ENSG00000068796.19	ENST00000676271.1	7541	20	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_5	80.0684264150811	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTCACCTTGACTCTTT	10	True	NA	23	True	AATAAA	-19	NA	62306451	62391025	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_62306537_62347129_62347225_62348047_62348168_62350065_62350121_62352587_62352654_62353274_62353376_62355158_62355255_62357690_62357746_62358136_62358300_62361241_62361333_62361465_62361530_62362449_62362542_62363177_62363321_62363694_62363900_62365242_62365354_62366413_62366482_62373686_62373838_62377660_62377763_62381117_62381254_62385483
H1_mix_00069726	chr5	+	1143	4	FSM	ENSG00000145642.12	ENST00000509189.5	846	4	-305	8	-305	0	multi-exon	FALSE	canonical	3	238	junction_1	175.797231680896	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGAAACGGTTTGTAATA	NA	False	NA	11	True	AATAAA	-13	NA	64690136	64718082	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_64690815_64694086_64694200_64695506_64695665_64717888
H1_mix_00069727	chr5	+	1334	3	FSM	ENSG00000145642.12	ENST00000389074.6	772	3	-670	108	-609	0	multi-exon	FALSE	canonical	3	442	junction_1	95.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGAAACGGTTTGTAATA	NA	False	NA	11	True	AATAAA	-13	NA	64689832	64718082	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_64690815_64695506_64695665_64717888
H1_mix_00069734	chr5	+	2154	12	FSM	ENSG00000113593.12	ENST00000535264.5	2195	12	41	0	-10	0	multi-exon	FALSE	canonical	2	3	junction_1	160.957927873884	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTACCTTTGACTTTT	-9	True	NA	15	True	ATTAAA	-12	NA	65563279	65587541	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_65563507_65563802_65563840_65567512_65567616_65569631_65569733_65569877_65569999_65571838_65572287_65576878_65577070_65579423_65579614_65583037_65583220_65585013_65585096_65585998_65586182_65587252
H1_mix_00069736	chr5	+	987	4	FSM	ENSG00000113593.12	ENST00000507608.1	987	4	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_3	28.3117564901148	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCCGACGAATGGCTGT	5955	False	NA	NA	False	NA	NA	NA	65569362	65576926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_65569733_65569877_65569999_65571838_65572287_65576878
H1_mix_00069740	chr5	+	3912	12	FSM	ENSG00000113597.18	ENST00000505553.5	1410	12	-327	-2175	-286	708	multi-exon	FALSE	canonical	3	80	junction_10	26.2763445134923	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTCCTCTTCTGTTTCC	NA	False	NA	NA	False	AATAAA	-16	NA	65624717	65666941	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_65625107_65635300_65635370_65635943_65636044_65637695_65637781_65647054_65647183_65650809_65650883_65652500_65652546_65658367_65658502_65660698_65660898_65662049_65662151_65664233_65664385_65664503
H1_mix_00069741	chr5	+	3226	13	FSM	ENSG00000113597.18	ENST00000399438.8	2910	13	-316	0	-293	0	multi-exon	FALSE	canonical	3	37	junction_7	47.7237420531496	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCTCTATATTTTAATTA	NA	False	NA	115	True	AGTAAA	-18	NA	65624710	65666233	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_65625107_65635300_65635370_65635943_65636044_65637695_65637781_65647054_65647183_65650809_65650883_65652500_65652546_65655635_65655654_65658367_65658502_65660698_65660898_65662049_65662151_65664236_65664385_65664503
H1_mix_00069742	chr5	+	2721	12	FSM	ENSG00000113597.18	ENST00000231526.8	2715	12	-6	0	0	0	multi-exon	FALSE	canonical	3	74	junction_10	27.7074444750656	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAAGTCTGTCTTTGTTTC	2	True	NA	7	True	AATAAA	-18	NA	65625033	65666069	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_65625107_65635300_65635370_65635943_65636044_65637695_65637781_65647054_65647183_65650809_65650883_65652500_65652546_65658367_65658502_65660698_65660898_65662049_65662151_65664236_65664385_65664503
H1_mix_00069743	chr5	+	1623	2	FSM	ENSG00000253251.3	ENST00000510585.3	1541	2	-307	225	-307	-225	multi-exon	FALSE	canonical	3	32	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGGAGTGCTATTTATG	NA	False	NA	19	True	AATAAA	-15	NA	65624719	65630703	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_65625107_65629467
H1_mix_00069746	chr5	+	8652	13	FSM	ENSG00000123213.23	ENST00000380985.10	8652	13	0	0	0	0	multi-exon	FALSE	canonical	3	883	junction_12	77.6292828483914	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTGTTATAAAGATGCC	-21	True	NA	NA	False	AATAAA	-20	NA	65722204	65829283	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_65722415_65758566_65758827_65762959_65763109_65777426_65777535_65780178_65780282_65781260_65781422_65785774_65785911_65788117_65788485_65792453_65792656_65809514_65809702_65810036_65810166_65812254_65812392_65822780
H1_mix_00069748	chr5	+	8354	12	FSM	ENSG00000123213.23	ENST00000502464.5	8354	12	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	282.582073209136	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTGTTATAAAGATGCC	17	True	NA	NA	False	AATAAA	-20	NA	65722242	65829283	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_65722415_65762959_65763109_65777426_65777535_65780178_65780282_65781260_65781422_65785774_65785911_65788117_65788485_65792453_65792656_65809514_65809702_65810036_65810166_65812254_65812392_65822780
H1_mix_00069750	chr5	+	1658	8	FSM	ENSG00000123213.23	ENST00000511299.5	1658	8	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_4	324.06040001386	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTCTGGTAAATATTTT	NA	False	NA	11	True	GATAAA	-12	NA	65781415	65823328	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_65781422_65785774_65785911_65788117_65788485_65792453_65792602_65809514_65809702_65810036_65810166_65812254_65812392_65822780
H1_mix_00069751	chr5	+	7701	25	FSM	ENSG00000112851.15	ENST00000511297.5	4257	25	-967	-2477	-796	0	multi-exon	FALSE	canonical	3	11	junction_17	37.8656249856721	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGGAGAAGACATTTTTAG	3	True	NA	NA	False	AATAAA	-40	NA	65925759	66081023	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_65926807_65988634_65988683_65992709_65992908_65994746_65994865_66012048_66012128_66013548_66013639_66014668_66014726_66021321_66021386_66023289_66023365_66024305_66024451_66025479_66025553_66025847_66025978_66026301_66026418_66028273_66028344_66038382_66038483_66043076_66043199_66044136_66044299_66046352_66046539_66048666_66048782_66050782_66050967_66053405_66054952_66075023_66075231_66076315_66076409_66076874_66076950_66078422
H1_mix_00069752	chr5	+	5466	4	ISM	ENSG00000112851.15	ENST00000284037.10	8544	26	147481	1	-1090	-1	3prime_fragment	FALSE	canonical	3	177	junction_2	11.4406682011537	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGCCTATAAATACTGAC	2313	False	NA	NA	False	AATAAA	-18	NA	66074055	66082545	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_66075231_66076315_66076409_66076874_66076950_66078422
H1_mix_00069756	chr5	+	6778	12	FSM	ENSG00000153914.16	ENST00000334121.11	6699	12	-82	3	0	-3	multi-exon	FALSE	canonical	3	177	junction_5	20.5663610444719	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCCACTGTTGAGTAGTA	-20	True	NA	16	True	AATAAA	-17	NA	66144217	66183612	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_66144538_66153462_66153597_66159218_66159335_66162108_66162274_66162413_66162593_66163791_66163923_66164782_66164898_66170050_66170171_66170584_66170948_66174945_66175042_66177513_66177659_66178718
H1_mix_00069761	chr5	+	8825	5	FSM	ENSG00000153914.16	ENST00000519259.5	9353	5	528	0	319	0	multi-exon	FALSE	canonical	3	203	junction_2	15.9902313929474	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGAAAATGTTTGTTTAT	1560	False	NA	11	True	AATAAA	-13	NA	66164110	66180879	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_66170171_66170584_66170948_66174945_66175042_66177513_66177659_66178718
H1_mix_00069767	chr5	+	1329	4	FSM	ENSG00000145740.20	ENST00000380860.8	1317	4	-57	45	-57	0	multi-exon	FALSE	canonical	3	103	junction_3	75.4895136205464	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCTTTGTGGACCACTAA	NA	False	NA	-31	True	NA	NA	NA	69093933	69104695	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_69094339_69100806_69100930_69103061_69103129_69103961
H1_mix_00069768	chr5	+	4015	16	FSM	ENSG00000145740.20	ENST00000396591.8	3992	16	-23	0	0	0	multi-exon	FALSE	canonical	3	159	junction_14	27.371193291894	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGCATATTGATGTTTT	-47	True	NA	16	True	ATTAAA	-21	NA	69093990	69131069	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_69094339_69100806_69100930_69103061_69103129_69104630_69104717_69108348_69108437_69113139_69113228_69114419_69114497_69115236_69115408_69115925_69116215_69116393_69116603_69117238_69117397_69118498_69118629_69121693_69121896_69123198_69123426_69128003_69128133_69129446
H1_mix_00069769	chr5	+	4582	16	NIC	ENSG00000145740.20	novel	3992	16	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	103	junction_3	41.6237111912589	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAATTGCATATTGATG	51	True	NA	12	True	ATTAAA	-17	NA	69094088	69131065	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_69094339_69100806_69100930_69103061_69103129_69103961_69104717_69108348_69108437_69113139_69113228_69114419_69114497_69115236_69115408_69115925_69116215_69116393_69116603_69117238_69117397_69118498_69118629_69121693_69121896_69123198_69123426_69128003_69128133_69129446
H1_mix_00069770	chr5	+	3879	15	NIC	ENSG00000145740.20	novel	3992	16	NA	NA	10	-3	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	48.2521015720813	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATTGCATATTGATGT	-37	True	NA	13	True	ATTAAA	-18	NA	69094000	69131066	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_69094339_69103061_69103129_69104630_69104717_69108348_69108437_69113139_69113228_69114419_69114497_69115236_69115408_69115925_69116215_69116393_69116603_69117238_69117397_69118498_69118629_69121693_69121896_69123198_69123426_69128003_69128133_69129446
H1_mix_00069773	chr5	+	3200	8	NIC	ENSG00000134057.15	novel	2029	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	5011	junction_3	264.374193683336	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTGCATTTACTTTTAAT	-15	True	NA	-11	True	AATAAA	-31	NA	69167134	69177700	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_69167284_69167907_69168079_69168172_69168344_69171269_69171453_69174250_69174410_69174876_69175114_69175396_69177350_69177523
H1_mix_00069775	chr5	+	1992	9	NIC	ENSG00000134057.15	novel	2029	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	202	junction_7	1700.11865394742	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATCTTTTTTAAAAAGTT	-15	True	NA	17	True	AATAAA	-20	NA	69167134	69178245	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_69167284_69167907_69168079_69168172_69168344_69171269_69171453_69174250_69174410_69174876_69175114_69175396_69175538_69177290_69177350_69177523
H1_mix_00069785	chr5	+	1587	4	FSM	ENSG00000134056.12	ENST00000602380.1	1200	4	-110	-277	-38	-6	multi-exon	FALSE	canonical	3	52	junction_1	469.453819761741	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTAATGATTTCTAGAATA	NA	False	NA	16	True	AATAAA	-14	NA	69217721	69230152	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_69218112_69226337_69226402_69228199_69228388_69229207
H1_mix_00069788	chr5	+	1432	12	FSM	ENSG00000134058.12	ENST00000256443.8	1426	12	-7	1	0	0	multi-exon	FALSE	canonical	3	510	junction_4	42.187499617386	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCCATATAGTATCACAAAT	-12	True	NA	17	True	AATAAA	-29	NA	69234878	69277429	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_69235042_69235393_69235454_69252417_69252452_69254601_69254670_69255459_69255529_69258042_69258154_69259817_69259937_69262204_69262305_69269206_69269294_69272891_69273042_69276542_69276691_69277106
H1_mix_00069791	chr5	+	3057	18	FSM	ENSG00000152942.19	ENST00000616683.4	3057	18	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	48.2435430536231	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTGTTTCTCCTGTCTT	12	False	NA	11	True	ATTAAA	-12	NA	69370059	69414799	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_69370285_69371034_69371172_69372033_69372218_69373829_69374088_69374627_69374712_69381900_69382058_69384796_69384934_69386042_69386096_69386179_69386306_69386395_69386466_69389033_69389146_69391830_69392014_69393154_69393241_69393353_69393501_69396396_69396547_69400048_69400170_69410492_69410551_69414030
H1_mix_00069792	chr5	+	3164	17	FSM	ENSG00000152942.19	ENST00000305138.8	3164	17	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_10	19.0975088362331	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTCTCCTGTCTTTT	657	False	NA	13	True	ATTAAA	-14	NA	69370704	69414801	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_69371172_69372033_69372218_69373829_69374088_69374627_69374712_69381900_69382058_69384796_69384934_69386042_69386096_69386179_69386306_69386395_69386466_69389033_69389146_69391830_69392014_69393154_69393241_69393353_69393501_69396396_69396547_69400048_69400170_69410492_69410551_69414030
H1_mix_00069793	chr5	+	2648	16	FSM	ENSG00000152942.19	ENST00000358030.6	2648	16	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	52.8038719119052	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTGTTTCTCCTGTCTT	277	False	NA	11	True	ATTAAA	-12	NA	69371034	69414799	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_69371172_69373829_69374088_69374627_69374712_69381900_69382058_69384796_69384934_69386042_69386096_69386179_69386306_69386395_69386466_69389033_69389146_69391830_69392014_69393154_69393241_69393353_69393501_69396396_69396547_69400048_69400170_69410492_69410551_69414030
H1_mix_00069797	chr5	+	4395	6	FSM	ENSG00000152939.17	ENST00000454295.6	4376	6	-19	0	-8	0	multi-exon	FALSE	canonical	3	26	junction_2	66.8987294348704	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCACGATGCTCAGGTGAC	-10	True	NA	12	True	AATAAA	-25	NA	69415107	69444330	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_69415171_69419370_69420532_69432526_69432676_69432921_69433094_69440449_69440501_69441531
H1_mix_00069798	chr5	+	4864	7	NIC	ENSG00000152939.17	novel	1581	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	125	junction_1	21.674998398052	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCACGATGCTCAGGTGAC	6	True	NA	12	True	AATAAA	-25	NA	69415228	69444330	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_69415725_69419370_69420532_69424600_69424637_69432526_69432676_69432921_69433094_69440449_69440501_69441531
H1_mix_00069801	chr5	+	4774	9	FSM	ENSG00000197822.12	ENST00000396442.7	6181	9	-55	1462	-38	1367	multi-exon	FALSE	canonical	3	411	junction_3	34.0640481299566	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTATCCTATATTAATTT	114	False	NA	NA	False	NA	NA	NA	69492734	69556642	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_69492901_69504176_69504295_69509140_69509820_69513947_69514110_69534693_69534840_69544903_69545120_69547929_69548102_69551543_69551586_69553569
H1_mix_00069802	chr5	+	3185	8	FSM	ENSG00000197822.12	ENST00000680784.1	3168	8	-17	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	156.345770649545	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTATTTTTTTTTTTT	-26	True	NA	NA	False	NA	NA	NA	69492772	69555253	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_69492901_69504176_69504295_69509140_69509820_69534693_69534840_69544903_69545120_69547929_69548102_69551543_69551586_69553569
H1_mix_00069803	chr5	+	2059	8	NIC	ENSG00000197822.12	novel	3309	9	NA	NA	2	-64	combination_of_known_junctions	FALSE	canonical	1	7	junction_1	209.19261703131	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATCTACCAGCCTCCC	4	True	NA	NA	False	AATAAA	-36	NA	69492802	69554217	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_69492841_69504176_69504295_69509140_69509820_69534693_69534840_69544903_69545120_69547929_69548102_69551543_69551586_69553569
H1_mix_00069805	chr5	+	4555	17	FSM	ENSG00000183474.16	ENST00000380729.8	4555	17	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	132.188785454743	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTGATATATTTTATTAT	NA	False	NA	NA	False	AATAAA	-24	NA	69560190	69595221	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_69560404_69562672_69562771_69565099_69565189_69566130_69566209_69566588_69566626_69566966_69567054_69567726_69567778_69568152_69568208_69572444_69572551_69578711_69578803_69579020_69579109_69579756_69579865_69582365_69582430_69585593_69585698_69586253_69586357_69590327_69590368_69592078
H1_mix_00069806	chr5	+	2971	16	FSM	ENSG00000183474.16	ENST00000510979.5	2952	16	-19	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	111.356604354359	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTACTAAACATACAAAAAAT	9	False	NA	NA	False	NA	NA	NA	69560222	69593767	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_69560404_69565099_69565189_69566130_69566209_69566588_69566626_69566966_69567054_69567726_69567778_69568152_69568208_69572444_69572551_69578711_69578803_69579020_69579109_69579756_69579865_69582365_69582430_69585593_69585698_69586253_69586357_69590327_69590368_69592078
H1_mix_00069808	chr5	+	710	3	FSM	ENSG00000205572.10	ENST00000380751.9	703	3	-7	0	-7	0	multi-exon	FALSE	canonical	3	1899	junction_1	67	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTTAACATAGTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	70025239	70032696	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_70025459_70026406_70026516_70032314
H1_mix_00069809	chr5	+	1932	3	FSM	ENSG00000205572.10	ENST00000380750.8	1907	3	-35	10	-31	0	multi-exon	FALSE	canonical	3	51	junction_2	924	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATGGCACTGTCTTGTC	NA	False	NA	NA	False	NA	NA	NA	70025215	70043103	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_70025459_70026406_70026516_70041523
H1_mix_00069810	chr5	+	1683	4	FSM	ENSG00000205572.10	ENST00000506542.1	1666	4	-17	0	0	0	multi-exon	FALSE	canonical	3	3	junction_3	882.686807423788	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATGGCACTGTCTTGTC	44	False	NA	NA	False	NA	NA	NA	70025355	70043103	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_70025459_70026406_70026516_70041523_70041632_70041740
H1_mix_00069811	chr5	+	624	3	FSM	ENSG00000205572.10	ENST00000514285.1	433	3	9	-200	9	-1	multi-exon	TRUE	canonical	3	302	junction_1	865.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCTTTGTTAACATAGTT	284	False	NA	NA	False	AATAAA	-13	NA	70025595	70032693	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_70025732_70026406_70026516_70032314
H1_mix_00069812	chr5	+	1456	8	FSM	ENSG00000205571.14	ENST00000626847.2	1440	8	-16	0	0	0	multi-exon	FALSE	canonical	3	414	junction_7	388.810535676518	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTATCTGTGATTGT	NA	False	NA	NA	False	AATAAA	-22	NA	70049637	70077592	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_70049767_70063414_70063487_70065964_70066085_70066933_70067135_70067293_70067447_70069234_70069331_70070640_70070752_70077018
H1_mix_00069821	chr5	+	2472	3	FSM	ENSG00000172058.16	ENST00000507348.5	663	3	-344	-1465	-35	1465	multi-exon	TRUE	canonical	3	305	junction_1	863	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGGTTTCTGTAATTCT	NA	False	NA	NA	False	AATAAA	-45	NA	70900633	70909580	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_70901150_70901824_70901934_70907733
H1_mix_00069824	chr5	+	1482	9	FSM	ENSG00000172062.17	ENST00000380707.9	1482	9	0	0	0	0	multi-exon	FALSE	canonical	3	870	junction_8	283.696333030584	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTATCTGTGATTGTATT	-1	True	NA	NA	False	AATAAA	-25	NA	70925086	70953015	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_70925185_70938838_70938911_70941388_70941509_70942357_70942559_70942717_70942871_70944657_70944754_70946065_70946177_70951940_70951995_70952438
H1_mix_00069827	chr5	+	7004	32	FSM	ENSG00000145734.20	ENST00000508917.6	7194	32	0	190	0	-190	multi-exon	FALSE	canonical	3	19	junction_8	11.7083888031738	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTACATACAATAAACTTC	-1	True	NA	NA	False	AAAAAG	-6	NA	71455685	71545287	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_71456090_71458578_71458856_71461816_71461927_71464057_71464118_71466095_71466222_71467353_71467488_71470394_71470490_71483841_71483897_71486483_71486628_71489403_71489683_71490983_71491132_71495249_71495409_71497269_71497427_71501561_71501654_71502598_71502792_71504620_71504752_71509464_71511152_71512240_71512429_71513184_71513408_71514943_71515123_71516060_71516272_71517321_71517453_71522288_71522491_71522755_71522950_71523938_71524324_71532307_71532428_71539041_71539079_71539556_71539650_71541453_71541683_71542104_71542266_71544356_71544508_71545038
H1_mix_00069829	chr5	+	3643	17	FSM	ENSG00000131844.17	ENST00000682727.1	3621	17	-22	0	-2	0	multi-exon	FALSE	canonical	1	12	junction_10	114.211358344956	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAAATGTTTTCCTAATA	-6	True	NA	-10	True	AATAGA	-3	NA	71587273	71658668	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_71587555_71592925_71592993_71596279_71596365_71599658_71599761_71602505_71602634_71604355_71604469_71626639_71626754_71632120_71632186_71634942_71635043_71635150_71635247_71636103_71636168_71643818_71643896_71646210_71646278_71649096_71649254_71650068_71650184_71652668_71652755_71656742
H1_mix_00069831	chr5	+	3647	17	FSM	ENSG00000131844.17	ENST00000340941.11	3624	17	-23	0	0	0	multi-exon	FALSE	canonical	1	81	junction_12	68.8548915746006	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTGTGATATTTAGTA	13	False	NA	28	True	AATAAA	-17	NA	71587316	71658706	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_71587555_71592925_71592993_71596279_71596365_71599658_71599761_71602505_71602634_71604355_71604469_71626639_71626754_71632120_71632186_71634942_71635043_71635150_71635247_71641002_71641076_71643818_71643896_71646210_71646278_71649096_71649254_71650068_71650184_71652668_71652755_71656742
H1_mix_00069833	chr5	+	5555	5	FSM	ENSG00000131844.17	ENST00000682438.1	5535	5	-20	0	0	0	multi-exon	FALSE	canonical	3	292	junction_1	26.3201443765037	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTGTGTGATATTTAG	NA	False	NA	26	True	AATAAA	-15	NA	71643042	71658704	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_71646278_71649096_71649254_71650068_71650184_71652668_71652755_71656742
H1_mix_00069838	chr5	+	603	1	FSM	ENSG00000226544.4	ENST00000466005.2	733	1	-26	156	-26	-156	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGGGAAGCATTTACAGGA	-12	True	NA	NA	False	NA	NA	NA	72725392	72725995	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_72725400_72726000
H1_mix_00069845	chr5	+	1287	11	FSM	ENSG00000157107.14	ENST00000287761.7	1287	11	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_10	23.9633052812003	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTTTAGATTAGCTAAC	15	True	NA	NA	False	AATAAA	-41	NA	72956070	73038123	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_72956130_72968497_72968590_72989426_72989502_72990477_72990620_72990711_72990865_73006444_73006550_73015625_73015725_73017211_73017309_73034656_73034702_73037142_73037216_73037776
H1_mix_00069848	chr5	+	2186	4	FSM	ENSG00000145741.17	ENST00000679077.1	2165	4	-21	0	0	0	multi-exon	FALSE	canonical	3	574	junction_1	2142.33055857919	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTAATAAAGTTCTTTGC	-5	True	NA	3	True	NA	NA	NA	73498435	73505469	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_73498800_73499133_73499203_73502487_73503118_73504346
H1_mix_00069849	chr5	+	1183	5	FSM	ENSG00000145741.17	ENST00000514360.5	1177	5	-6	0	0	0	multi-exon	FALSE	canonical	3	4783	junction_1	172.322916351831	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTTTATTTTTTTATT	-5	True	NA	29	True	AATAAA	-16	NA	73498435	73505495	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_73498559_73499133_73499203_73502487_73503118_73504346_73504404_73505191
H1_mix_00069857	chr5	+	1812	14	FSM	ENSG00000049860.14	ENST00000261416.12	1812	14	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_8	50.2630947935446	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGACCCTCTATCTTAT	0	True	NA	28	True	AATAAA	-19	NA	74685232	74721288	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_74685560_74689327_74689474_74693638_74693705_74696692_74696740_74696995_74697107_74705218_74705321_74713505_74713636_74715509_74715691_74716586_74716674_74718290_74718364_74718796_74718972_74720427_74720519_74720642_74720748_74721117
H1_mix_00069860	chr5	+	4338	6	FSM	ENSG00000164346.10	ENST00000610426.5	4337	6	-1	0	0	0	multi-exon	FALSE	canonical	3	429	junction_5	24.5519856630783	309	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCAGTGTTTTTTTTCTTC	-2	True	NA	NA	False	AATAAA	-16	NA	74767247	74780113	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_74767364_74768930_74769119_74769213_74769365_74770630_74770811_74773867_74774061_74776603
H1_mix_00069864	chr5	+	3693	19	FSM	ENSG00000113161.17	ENST00000343975.9	3681	19	-12	0	0	0	multi-exon	TRUE	canonical	3	76	junction_12	145.221765280247	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAGCCTGGGCCAGAGAA	-16	True	NA	19	True	AATAAA	-26	NA	75337219	75361423	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_75337301_75342582_75342771_75343852_75343965_75344244_75344333_75345573_75345659_75347203_75347310_75350041_75350149_75350257_75350375_75350788_75350950_75351067_75351316_75351423_75351603_75354502_75354698_75355364_75355523_75356342_75356449_75358656_75358828_75359169_75359311_75359397_75359557_75359984_75360140_75360287
H1_mix_00069866	chr5	+	4530	20	FSM	ENSG00000113161.17	ENST00000287936.9	4530	20	0	0	0	0	multi-exon	FALSE	canonical	3	551	junction_12	58.2375972077476	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGTAAGCAGTAACCTT	-16	True	NA	15	True	AGTAAA	-25	NA	75337219	75362101	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_75337301_75342582_75342771_75343852_75343965_75344244_75344333_75345573_75345659_75347203_75347310_75350041_75350149_75350257_75350375_75350788_75350950_75351067_75351316_75351423_75351603_75354502_75354698_75355055_75355215_75355364_75355523_75356342_75356449_75358656_75358828_75359169_75359311_75359397_75359557_75359984_75360140_75360287
H1_mix_00069879	chr5	+	3788	3	FSM	ENSG00000250802.7	ENST00000643974.1	3788	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATGAGCTGTTAATAAA	246	False	NA	-36	True	TATAAA	-14	NA	77087012	77142239	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_77087620_77118319_77118522_77139260
H1_mix_00069881	chr5	+	3025	1	FSM	ENSG00000251566.1	ENST00000503360.1	598	1	-1443	-984	-1443	984	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACAATTGTCTCATTTGT	5848	False	NA	NA	False	TTTAAA	-16	NA	77145124	77148149	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_77145100_77148100
H1_mix_00069885	chr5	+	576	5	FSM	ENSG00000085365.18	ENST00000511551.2	559	5	-17	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	224.615783060764	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCAGTCAACATGGTAGTA	-10	True	NA	59	True	AAGAAA	-40	NA	78360610	78416635	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_78360729_78370619_78370806_78388836_78388915_78415519_78415619_78416540
H1_mix_00069886	chr5	+	6149	9	FSM	ENSG00000085365.18	ENST00000621999.5	6143	9	-6	0	0	0	multi-exon	FALSE	canonical	3	336	junction_7	42.4144359269341	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGGTACCTCTGCTAA	-10	True	NA	11	True	AATAAA	-22	NA	78360610	78480739	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_78360729_78388836_78388915_78415519_78415619_78416540_78416650_78418774_78418904_78421800_78421961_78449932_78450035_78459244_78459363_78475503
H1_mix_00069887	chr5	+	6189	8	FSM	ENSG00000085365.18	ENST00000618166.4	1358	8	6	-4837	0	124	multi-exon	FALSE	canonical	1	3	junction_1	138.536667215814	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGTCATAATGGCGCAAT	-4	True	NA	NA	False	TTTAAA	-26	NA	78360616	78480863	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_78360729_78415519_78415619_78416540_78416650_78418774_78418904_78421800_78421961_78449932_78450035_78459244_78459363_78475503
H1_mix_00069888	chr5	+	5679	3	FSM	ENSG00000085365.18	ENST00000506858.2	1603	3	-42	-4034	-42	124	multi-exon	FALSE	canonical	3	9	junction_1	184	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGTCATAATGGCGCAAT	NA	False	NA	NA	False	TTTAAA	-26	NA	78457750	78480863	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_78457952_78459244_78459363_78475503
H1_mix_00069892	chr5	+	3215	16	FSM	ENSG00000164329.14	ENST00000423041.6	3223	16	8	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	46.3338609082674	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGCCTTTTTTTTCTGT	-11	True	NA	11	True	AATAAA	-21	NA	79612440	79686648	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_79612736_79613010_79613076_79619611_79619786_79619993_79620084_79623251_79623490_79640850_79640966_79641104_79641197_79642843_79642911_79645122_79645193_79648616_79648694_79649061_79649191_79656957_79657002_79668891_79669029_79679578_79679671_79681981_79682062_79685198
H1_mix_00069894	chr5	+	3478	15	NIC	ENSG00000164329.14	novel	3223	16	NA	NA	8	-4	intron_retention	FALSE	canonical	3	98	junction_6	28.7363099615118	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGAGGTGCCTTTTTTTT	-3	True	NA	7	True	AATAAA	-17	NA	79612448	79686644	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_79613076_79619611_79619786_79619993_79620084_79623251_79623490_79640850_79640966_79641104_79641197_79642843_79642911_79645122_79645193_79648616_79648694_79649061_79649191_79656957_79657002_79668891_79669029_79679578_79679671_79681981_79682062_79685198
H1_mix_00069895	chr5	+	3199	16	FSM	ENSG00000164329.14	ENST00000296783.7	3129	16	-70	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	46.7430802959706	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGCCTTTTTTTTCTGT	-4	True	NA	11	True	AATAAA	-21	NA	79612502	79686648	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_79612770_79613010_79613076_79619611_79619786_79619993_79620084_79623251_79623490_79640850_79640966_79641104_79641197_79642831_79642911_79645122_79645193_79648616_79648694_79649061_79649191_79656957_79657002_79668891_79669029_79679578_79679671_79681981_79682062_79685198
H1_mix_00069896	chr5	+	3097	16	NIC	ENSG00000164329.14	novel	3129	16	NA	NA	11	-7	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	46.1343930514125	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTGAGGTGCCTTTTT	11	False	NA	4	True	AATAAA	-14	NA	79612585	79686641	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_79612770_79613010_79613076_79619611_79619786_79619993_79620084_79623251_79623490_79640850_79640966_79641104_79641197_79642843_79642911_79645122_79645193_79648616_79648694_79649061_79649191_79656957_79657002_79668891_79669029_79679578_79679671_79681981_79682062_79685198
H1_mix_00069900	chr5	+	782	3	NNC	ENSG00000113296.14	novel	573	5	NA	NA	-10	-35804	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	21	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCTCCTGTGTATGTG	NA	False	NA	10	True	AATAAA	-24	NA	79991300	80020102	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_79991413_79998331_79998376_80019476
H1_mix_00069904	chr5	+	10814	19	FSM	ENSG00000039319.17	ENST00000505560.5	10805	19	-9	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	24.0491395087457	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGGGATTTTCAATGC	-6	True	NA	NA	False	AATAAA	-16	NA	80408054	80483379	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_80408154_80427491_80427546_80434108_80434218_80436755_80439008_80439935_80440033_80443122_80443285_80445262_80445406_80448025_80448405_80449590_80449714_80450430_80450587_80451484_80451710_80455691_80455775_80456460_80456566_80456944_80457093_80459413_80459495_80472760_80472924_80473753_80473860_80474662_80474831_80477218
H1_mix_00069906	chr5	+	5143	7	FSM	ENSG00000039319.17	ENST00000512907.5	5143	7	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_4	6.81705377873919	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGGAGGCACATTTTGAA	NA	False	NA	20	True	AATAAA	-22	NA	80453988	80479118	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_80456566_80456944_80457093_80459413_80459495_80472760_80472924_80473753_80473860_80474662_80474831_80477218
H1_mix_00069916	chr5	+	4626	5	FSM	ENSG00000131732.12	ENST00000254037.6	4606	5	-20	0	-4	0	multi-exon	FALSE	canonical	3	182	junction_1	12.4699639133399	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAAGGATTCCAAGTTAC	-7	True	NA	NA	False	AATAAA	-30	NA	81301582	81313297	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_81305142_81308560_81308712_81308945_81309039_81311210_81311280_81312543
H1_mix_00069918	chr5	+	1373	6	FSM	ENSG00000131732.12	ENST00000380199.9	1372	6	-1	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	51.2288980947277	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTATAATTTTTCTGAATA	8	True	NA	31	True	AATAAA	-35	NA	81301622	81313154	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_81301671_81304740_81305142_81308560_81308712_81308945_81309039_81311210_81311280_81312543
H1_mix_00069920	chr5	+	1452	4	FSM	ENSG00000152348.16	ENST00000355178.8	1438	4	-14	0	-12	0	multi-exon	FALSE	canonical	2	8	junction_3	65.4285021140549	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTATTTTTCTGTGAGT	NA	False	NA	NA	False	AATAAA	-20	NA	81972010	82148117	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_81972307_81987558_81987679_82058494_82058603_82147189
H1_mix_00069928	chr5	+	1645	8	FSM	ENSG00000152422.16	ENST00000511817.1	1636	8	-36	27	0	0	multi-exon	FALSE	canonical	3	23	junction_1	38.1639855874405	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGTGTTTTTAATAAA	11	False	NA	17	True	AATAAA	-18	NA	83077556	83353760	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_83077663_83104909_83105059_83111027_83111204_83195769_83195937_83203551_83203708_83204814_83204922_83258529_83258678_83353124
H1_mix_00069929	chr5	+	9841	13	ISM	ENSG00000038427.16	ENST00000343200.9	9455	14	-243	1	-187	0	intron_retention	FALSE	canonical	3	247	junction_6	232.632518984103	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGACTGGTCTGGTTATT	-2	True	NA	17	True	AAGAAA	-24	NA	83471430	83582302	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_83472024_83483512_83483589_83490097_83490473_83493545_83493721_83493803_83493932_83512102_83512397_83537006_83542269_83545536_83545651_83547970_83548085_83553363_83553523_83554955_83555039_83572415_83572561_83579979
H1_mix_00069930	chr5	+	9455	14	FSM	ENSG00000038427.16	ENST00000343200.9	9455	14	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_6	223.545079048643	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGACTGGTCTGGTTATTT	-6	True	NA	18	True	AAGAAA	-25	NA	83471673	83582303	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_83472024_83483512_83483589_83490097_83490473_83493545_83493721_83493803_83493932_83512102_83512397_83537006_83542269_83545536_83545651_83547970_83548085_83553363_83553523_83554955_83555039_83572415_83572561_83579979_83580163_83580306
H1_mix_00069931	chr5	+	12345	15	FSM	ENSG00000038427.16	ENST00000265077.8	12345	15	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_6	271.235758584103	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGACTGGTCTGGTTATT	-3	True	NA	17	True	AAGAAA	-24	NA	83471743	83582302	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_83472024_83483512_83483589_83490097_83490473_83493545_83493721_83493803_83493932_83512102_83512397_83519348_83522310_83537006_83542269_83545536_83545651_83547970_83548085_83553363_83553523_83554955_83555039_83572415_83572561_83579979_83580163_83580306
H1_mix_00069935	chr5	+	4368	2	FSM	ENSG00000250320.7	ENST00000654215.1	3603	2	-8	-757	-8	757	multi-exon	FALSE	canonical	3	55	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATAAGTGTCCATGAAT	1308	False	NA	NA	False	AAAAAG	-28	NA	84385880	84392014	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_84386056_84387821
H1_mix_00069943	chr5	+	586	3	FSM	ENSG00000247828.9	ENST00000504922.6	633	3	47	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	30.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATTTTGATGAACTATAC	-2	True	NA	41	True	AATAAA	-37	NA	88268914	88436685	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_88269028_88270525_88270586_88436272
H1_mix_00069944	chr5	+	632	5	NIC	ENSG00000247828.9	novel	1101	8	NA	NA	4	-99	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	47.4414112353332	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATATTGTTTATGTTCCTC	20	True	NA	-78	True	AATACA	-19	NA	88268936	88436566	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_88269028_88270525_88270586_88282041_88282107_88410072_88410195_88436272
H1_mix_00069945	chr5	+	4649	4	FSM	ENSG00000247828.9	ENST00000660783.1	4644	4	-5	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	44.6119067315243	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTACTAAGTAACTTT	-26	True	NA	NA	False	NA	NA	NA	88269009	88287016	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_88269120_88270525_88270586_88282041_88282107_88282602
H1_mix_00069946	chr5	+	730	6	FSM	ENSG00000247828.9	ENST00000662970.2	715	6	-19	4	0	-2	multi-exon	FALSE	canonical	3	10	junction_4	39.2295806758115	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTTTGTGGTAGTTTGT	0	True	NA	7	True	AATAAA	-19	NA	88268995	88287653	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_88269120_88270525_88270586_88282041_88282107_88282714_88282867_88285740_88285852_88287435
H1_mix_00069948	chr5	+	566	3	FSM	ENSG00000247828.9	ENST00000657972.2	558	3	-14	6	0	-1	multi-exon	FALSE	canonical	3	29	junction_2	30	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATATTTGGTTTCTTGTG	-26	True	NA	24	True	AATAAA	-43	NA	88269009	88436668	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_88269120_88270525_88270586_88436272
H1_mix_00069950	chr5	+	497	3	FSM	ENSG00000247828.9	ENST00000684909.1	502	3	5	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	10.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGGTTTCTTGTGATTT	3	True	NA	28	True	AATAAA	-24	NA	88269038	88436672	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_88269076_88270525_88270586_88436272
H1_mix_00069951	chr5	+	966	3	FSM	ENSG00000247828.9	ENST00000665319.2	3349	3	105	2278	91	137	multi-exon	FALSE	canonical	0	0	junction_1	14	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTTTATAAAATTATTTT	9	True	NA	NA	False	NA	NA	NA	88392285	88437059	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_88392343_88410072_88410195_88436272
H1_mix_00069953	chr5	+	763	8	FSM	ENSG00000113356.13	ENST00000503373.5	763	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	324.762519200648	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTATTAGGCATGAAATT	NA	False	NA	NA	False	NA	NA	NA	90474260	90512129	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_90474319_90485524_90485685_90487999_90488130_90495676_90495734_90497655_90497707_90501905_90501989_90506527_90506675_90512052
H1_mix_00069955	chr5	+	3240	8	NNC	ENSG00000113356.13	novel	3251	8	NA	NA	-4	-12	at_least_one_novel_splicesite	FALSE	canonical	3	186	junction_5	297.347251130899	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCACAAACAACAAAACTCT	-10	True	NA	163	True	AATAAA	-6	NA	90474884	90514541	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_90475021_90485534_90485685_90487999_90488130_90495676_90495734_90497655_90497707_90501908_90501989_90506527_90506675_90512052
H1_mix_00069956	chr5	+	688	4	FSM	ENSG00000113356.13	ENST00000514483.5	682	4	-6	0	0	0	multi-exon	FALSE	canonical	3	120	junction_3	368.859804743693	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAGTGAAAAAGAATTGGC	-6	True	NA	93	True	CATAAA	-20	NA	90474888	90490858	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_90475021_90485524_90485685_90487999_90488130_90490592
H1_mix_00069957	chr5	+	3251	8	FSM	ENSG00000113356.13	ENST00000504930.5	3251	8	0	0	0	0	multi-exon	FALSE	canonical	3	457	junction_1	181.576767371213	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTCTGGTTAATGATTA	-6	True	NA	NA	False	AATAAA	-18	NA	90474888	90514553	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_90475021_90485534_90485685_90487999_90488130_90495676_90495734_90497655_90497707_90501905_90501989_90506527_90506675_90512052
H1_mix_00069958	chr5	+	581	4	NIC	ENSG00000113356.13	novel	682	4	NA	NA	11	-80	combination_of_known_junctions	FALSE	canonical	3	120	junction_3	372.578701603955	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACATTTATATGTGCCTA	11	True	NA	13	True	AATAAA	-18	NA	90474905	90490778	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_90475021_90485534_90485685_90487999_90488130_90490592
H1_mix_00069966	chr5	+	1546	8	NNC	ENSG00000164199.18	novel	893	6	NA	NA	-94	1	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	36.9710311305641	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTGGTATCATCCAGCT	NA	False	NA	11	True	AATAAA	-11	NA	90929145	91164213	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_90929314_90965414_90965532_90985343_90985523_91072446_91072605_91102218_91102341_91150029_91150222_91153220_91153399_91163781
H1_mix_00069967	chr5	+	1519	8	NIC	ENSG00000164199.18	novel	893	6	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	36.9710311305641	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGTATCATCCAGCTTC	NA	False	NA	13	True	AATAAA	-13	NA	90929259	91164215	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_90929399_90965414_90965532_90985343_90985523_91072446_91072605_91102218_91102341_91150029_91150222_91153220_91153399_91163781
H1_mix_00069978	chr5	+	2644	6	FSM	ENSG00000175449.14	ENST00000380005.9	2582	6	-42	-20	-19	20	multi-exon	FALSE	canonical	3	20	junction_2	17.6113599702011	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTGGTAAGTAATATTTT	-29	True	NA	NA	False	AATAAA	-44	NA	95646734	95658102	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_95646818_95652136_95652332_95653116_95653215_95654060_95654237_95654332_95654368_95656045
H1_mix_00069979	chr5	+	5395	12	FSM	ENSG00000164292.13	ENST00000379982.8	5370	12	0	-25	0	25	multi-exon	FALSE	canonical	3	507	junction_7	69.4305051207487	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCTTGGATGTTGAAAT	-2	True	NA	100	True	AATAAA	-41	NA	95731335	95796386	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_95731685_95731858_95732085_95736888_95737076_95748332_95748488_95752238_95752351_95755395_95755762_95763507_95763621_95768045_95768167_95780251_95780426_95783796_95783964_95788761_95788859_95793058
H1_mix_00069984	chr5	+	4623	32	NIC	ENSG00000153113.24	novel	4490	32	NA	NA	3	0	intron_retention	FALSE	canonical	3	39	junction_5	56.5622510285366	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTGTGTATTTTTTT	-19	True	NA	NA	False	ATTAAA	-22	NA	96662239	96774683	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_96662498_96675538_96675602_96695835_96695908_96722638_96722699_96726793_96726860_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765223_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
H1_mix_00069985	chr5	+	4839	32	FSM	ENSG00000153113.24	ENST00000675179.1	4490	32	-139	-210	0	210	multi-exon	FALSE	canonical	3	39	junction_5	51.0064777261792	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACACATTTTGACATTTTT	-22	True	NA	NA	False	NA	NA	NA	96662236	96774893	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_96662498_96675538_96675602_96695835_96695908_96722638_96722699_96726793_96726860_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765220_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
H1_mix_00069986	chr5	+	608	3	FSM	ENSG00000153113.24	ENST00000515160.5	617	3	0	9	0	-9	multi-exon	FALSE	canonical	3	124	junction_2	10.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGTAATTATATCACGTA	22	False	NA	NA	False	NA	NA	NA	96662402	96696285	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_96662498_96675538_96675602_96695835
H1_mix_00069988	chr5	+	4241	29	NIC	ENSG00000153113.24	novel	3273	30	NA	NA	3	0	intron_retention	FALSE	canonical	3	62	junction_22	42.3831376509911	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATCAAGGCATAAAATACA	-1	True	NA	NA	False	NA	NA	NA	96702791	96774636	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_96702916_96722638_96722699_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765223_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
H1_mix_00069989	chr5	+	4383	29	FSM	ENSG00000153113.24	ENST00000309190.9	4282	29	-105	4	-85	0	multi-exon	FALSE	canonical	3	95	junction_1	31.961452388393	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCTTGGTTGTGTATTT	36	False	NA	NA	False	ATTAAA	-18	NA	96702695	96774679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_96702916_96722638_96722699_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765220_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
H1_mix_00069990	chr5	+	4616	18	FSM	ENSG00000113441.16	ENST00000231368.10	12134	18	28	7490	28	987	multi-exon	TRUE	canonical	1	2	junction_6	3.0338345784065	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACAGAGTCAGACAGTGG	8	True	NA	NA	False	CATAAA	-36	NA	96936107	97030023	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_96936175_96979137_96979979_96985079_96985219_96986538_96986671_96993014_96993136_96993816_96993972_96996389_96996504_96998013_96998146_97003414_97003547_97006072_97006234_97006426_97006516_97013647_97013832_97014938_97015096_97022299_97022485_97024520_97024683_97026616_97026758_97027732_97027815_97028401
H1_mix_00070000	chr5	+	3997	26	FSM	ENSG00000145730.21	ENST00000438793.8	3990	26	-7	0	0	0	multi-exon	FALSE	canonical	0	0	junction_24	61.608129333717	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCAGTGTATTTTCCAG	-5	True	NA	18	True	AATAAA	-18	NA	102755297	103029716	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_102755349_102865822_102866285_102867272_102867394_102901355_102901414_102913933_102914022_102924956_102925043_102926584_102926669_102946836_102946886_102948377_102948446_102949536_102949618_102949901_102949979_102950716_102950821_102959874_102960060_102961157_102961230_102974115_102974437_102990271_102990402_103003032_103003150_103005153_103005227_103006800_103007012_103007456_103007658_103009750_103009867_103017333_103017434_103019789_103019844_103025130_103025335_103028184_103028239_103028886
H1_mix_00070002	chr5	+	3216	23	FSM	ENSG00000145730.21	ENST00000346918.7	3216	23	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_22	58.5753029501554	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGTTCATAACAGTGCC	8	True	NA	NA	False	NA	NA	NA	102865822	103029244	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_102866285_102867272_102867394_102901355_102901414_102913933_102914022_102924956_102925043_102926584_102926669_102946836_102946886_102948377_102948446_102949536_102949618_102949901_102949979_102950716_102950821_102959874_102960060_102961157_102961230_102974115_102974437_102990271_102990402_103003032_103003150_103005153_103005227_103006800_103007012_103007456_103007658_103009750_103009867_103017333_103017434_103019789_103019844_103028886
H1_mix_00070004	chr5	+	3289	23	NIC	ENSG00000145730.21	novel	3649	25	NA	NA	132	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_21	41.8168972134708	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTCAGTGTATTTTC	11	False	NA	15	True	AATAAA	-15	NA	102865954	103029713	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_102866285_102867272_102867394_102901355_102901414_102913933_102914022_102924956_102925043_102926584_102926669_102946836_102946886_102948377_102948446_102949536_102949618_102949901_102949979_102950716_102950821_102959874_102960060_102961157_102961230_102990271_102990402_103003032_103003150_103005153_103005227_103006800_103007012_103007456_103007658_103009750_103009867_103017333_103017434_103019789_103019844_103028181_103028239_103028886
H1_mix_00070008	chr5	+	5407	28	NIC	ENSG00000145725.20	novel	15407	30	NA	NA	15	-27	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	34.4915249724415	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACTTAAATGGTAAATTT	-28	True	NA	17	True	ATTAAA	-18	NA	103120315	103203209	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_103120489_103129305_103129704_103133452_103133649_103136731_103136823_103138383_103138470_103146526_103146682_103147930_103148033_103149151_103149314_103151252_103151375_103152647_103152750_103153847_103153935_103154669_103154746_103154833_103154944_103155908_103155995_103158187_103158314_103158451_103158574_103159145_103159329_103167178_103167321_103168071_103168296_103173154_103173283_103173857_103173973_103177666_103177775_103177863_103177981_103180020_103180189_103184671_103184745_103190841_103190983_103194899_103195026_103201521
H1_mix_00070009	chr5	+	5661	30	NNC	ENSG00000145725.20	novel	15407	30	NA	NA	-37	-27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	45.5242680051843	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACTTAAATGGTAAATTT	9	True	NA	17	True	ATTAAA	-18	NA	103120352	103203209	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_103120489_103129305_103129704_103133452_103133649_103136731_103136823_103138383_103138470_103146526_103146682_103147930_103148033_103149151_103149314_103151252_103151375_103152647_103152750_103153847_103153935_103154669_103154746_103154833_103154944_103155908_103155995_103158187_103158314_103158454_103158574_103159145_103159329_103167178_103167321_103168071_103168296_103173154_103173283_103173857_103173973_103177666_103177775_103177863_103177981_103180020_103180189_103183233_103183408_103184671_103184745_103186319_103186440_103190841_103190983_103194899_103195026_103201521
H1_mix_00070010	chr5	+	5519	30	NIC	ENSG00000145725.20	novel	15369	31	NA	NA	-1	-25	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	41.3008163554791	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTAAATGGTAAATTTTT	2	True	NA	19	True	ATTAAA	-20	NA	103120388	103203211	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_103120489_103129305_103129704_103133452_103133649_103136731_103136823_103138383_103138470_103146526_103146682_103147930_103148033_103149151_103149314_103151252_103151375_103152647_103152750_103153847_103153935_103154669_103154746_103154833_103154944_103155908_103155995_103158187_103158314_103158451_103158574_103159145_103159329_103167178_103167321_103168071_103168296_103173154_103173283_103173857_103173973_103177666_103177775_103177863_103177981_103180020_103180189_103184671_103184745_103186319_103186440_103187313_103187377_103190841_103190983_103194899_103195026_103201521
H1_mix_00070012	chr5	+	2988	3	FSM	ENSG00000181751.10	ENST00000319933.7	2988	3	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	13.5	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTTGTTTTTT	0	True	NA	10	True	AATAAA	-15	NA	103258762	103278660	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_103258897_103265907_103265998_103275896
H1_mix_00070013	chr5	+	2716	3	FSM	ENSG00000181751.10	ENST00000515669.5	1573	3	0	-1143	0	0	multi-exon	FALSE	canonical	3	37	junction_1	66	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTGTTGTGTGGTGCTTT	-10	True	NA	17	True	AATAAA	-17	NA	103259035	103278371	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_103259187_103265907_103265998_103275896
H1_mix_00070021	chr5	+	8026	1	ISM	ENSG00000151422.14	ENST00000281092.9	12044	20	440919	0	11299	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCCTTGTCTTATTTAA	NA	False	NA	9	True	AATAAA	-21	NA	109188815	109196841	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_109188800_109196800
H1_mix_00070026	chr5	+	6258	3	FSM	ENSG00000164209.17	ENST00000513706.2	6236	3	-22	0	-22	0	multi-exon	FALSE	canonical	3	179	junction_1	34.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTTTCTCCTACTGATG	NA	False	NA	14	True	AATAAA	-18	NA	110753279	110765161	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_110755522_110756701_110756760_110761203
H1_mix_00070033	chr5	+	1370	2	FSM	ENSG00000224032.8	ENST00000427306.3	1373	2	-3	6	0	-6	multi-exon	FALSE	canonical	3	408	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCACTTTGGCATTTGTGT	NA	False	NA	27	True	AATAAA	-8	NA	112160525	112162302	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_112161296_112161702
H1_mix_00070041	chr5	+	3063	5	FSM	ENSG00000153037.15	ENST00000505459.6	2776	5	-24	-263	-24	263	multi-exon	FALSE	canonical	3	957	junction_3	338.070258969937	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTCTCAAAATATTGTGC	NA	False	NA	11	True	AATAAA	-21	NA	112861262	112870051	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_112861418_112862507_112862584_112864456_112864529_112864620_112864733_112867403
H1_mix_00070045	chr5	+	937	2	FSM	ENSG00000172795.17	ENST00000504961.1	852	2	-82	-3	21	3	multi-exon	FALSE	canonical	3	62	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTTGCAGTGTTGTTTT	-1	True	NA	16	True	ATTAAA	-17	NA	112976730	112984654	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_112976987_112983973
H1_mix_00070047	chr5	+	13441	11	FSM	ENSG00000172795.17	ENST00000389063.3	10110	11	-67	-3264	21	3264	multi-exon	TRUE	canonical	2	184	junction_10	35.5589651142999	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACTAAAAATACAAAAAAACT	-1	True	NA	NA	False	NA	NA	NA	112976730	113025459	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_112976987_112985834_112985987_112992120_112992249_112992671_112992771_113001083_113001237_113001356_113001470_113001566_113001675_113003941_113004078_113007937_113008043_113010755_113010808_113013320
H1_mix_00070050	chr5	+	6402	29	ISM	ENSG00000047188.16	ENST00000161863.9	6305	30	-6	0	-6	0	intron_retention	FALSE	canonical	3	87	junction_13	16.0765071340964	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTCAGATCTTATTTCT	-10	True	NA	15	True	ATTAAA	-16	NA	113513687	113595284	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_113514083_113515271_113515363_113524980_113525178_113526585_113526786_113532878_113533046_113534304_113534408_113535641_113535799_113539073_113539182_113540967_113541117_113542367_113542504_113548540_113548668_113548954_113549021_113553180_113553360_113553589_113553687_113553766_113553855_113553941_113554023_113556051_113556135_113561079_113561186_113563372_113563493_113563858_113564132_113565892_113566020_113567091_113567298_113567653_113567850_113579585_113579696_113581416_113581710_113584301_113584480_113591040_113591245_113591995_113592179_113593302
H1_mix_00070053	chr5	+	1459	6	FSM	ENSG00000080709.16	ENST00000503706.5	1457	6	-2	0	-2	0	multi-exon	FALSE	canonical	0	0	junction_1	49.4958584125985	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTTTGGTCACTTGACAT	15	False	NA	8	True	AATAAA	-22	NA	114433527	114496500	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_114433930_114463048_114463191_114473053_114473165_114487049_114487178_114493402_114493473_114495894
H1_mix_00070063	chr5	+	11544	44	FSM	ENSG00000172869.15	ENST00000539542.6	11538	44	-6	0	-6	0	multi-exon	FALSE	canonical	3	10	junction_34	26.2088173950723	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGGGGGTATACTATTGT	6	True	NA	18	True	AATAAA	-19	NA	119071080	119249127	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_119071657_119097978_119098105_119101934_119102007_119105179_119105259_119110150_119110284_119114474_119114542_119116157_119116337_119118814_119119005_119120970_119121140_119129210_119129424_119133131_119133386_119133493_119134179_119134267_119134390_119143840_119143931_119144535_119144639_119146836_119146957_119147248_119147471_119148738_119150422_119151928_119152037_119164506_119164677_119165182_119165281_119166615_119166782_119167602_119167865_119170189_119171281_119171777_119171970_119175260_119175338_119177356_119177485_119177995_119178245_119189707_119189887_119193827_119193971_119196370_119196457_119197754_119197957_119203318_119203437_119206833_119206897_119216900_119216988_119220471_119220594_119220939_119221082_119224708_119224770_119233339_119233468_119237321_119237415_119238988_119239081_119240418_119240472_119244358_119244577_119246994
H1_mix_00070064	chr5	+	11247	44	NIC	ENSG00000172869.15	novel	11538	44	NA	NA	-76	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_19	23.8869022586281	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTTTTAGGGGGTATA	NA	False	NA	11	True	AATAAA	-12	NA	119071010	119249120	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_119071258_119071554_119071657_119097978_119098105_119101934_119102007_119105179_119105259_119110150_119110284_119114474_119114542_119116157_119116337_119118814_119119005_119120970_119121140_119129210_119129424_119133131_119133386_119133493_119134179_119134267_119134390_119143840_119143931_119144535_119144639_119146836_119146957_119147248_119147471_119148738_119150422_119151928_119152037_119164506_119164677_119165182_119165281_119166615_119166782_119167602_119167865_119170189_119171281_119171777_119171970_119175260_119175338_119177356_119177485_119177995_119178245_119189707_119189887_119193827_119193971_119196370_119196457_119197754_119197957_119203318_119203437_119216900_119216988_119220471_119220594_119220939_119221082_119224708_119224770_119233339_119233468_119237321_119237415_119238988_119239081_119240418_119240472_119244358_119244577_119246994
H1_mix_00070065	chr5	+	11474	43	FSM	ENSG00000172869.15	ENST00000311085.8	11072	43	-409	7	-6	0	multi-exon	FALSE	canonical	3	31	junction_18	23.4610208885672	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTTTTAGGGGGTATA	6	True	NA	11	True	AATAAA	-12	NA	119071080	119249120	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_119071657_119097978_119098105_119101934_119102007_119105179_119105259_119110150_119110284_119114474_119114542_119116157_119116337_119118814_119119005_119120970_119121140_119129210_119129424_119133131_119133386_119133493_119134179_119134267_119134390_119143840_119143931_119144535_119144639_119146836_119146957_119147248_119147471_119148738_119150422_119151928_119152037_119164506_119164677_119165182_119165281_119166615_119166782_119167602_119167865_119170189_119171281_119171777_119171970_119175260_119175338_119177356_119177485_119177995_119178245_119189707_119189887_119193827_119193971_119196370_119196457_119197754_119197957_119203318_119203437_119216900_119216988_119220471_119220594_119220939_119221082_119224708_119224770_119233339_119233468_119237321_119237415_119238988_119239081_119240418_119240472_119244358_119244577_119246994
H1_mix_00070070	chr5	+	2497	23	FSM	ENSG00000133835.18	ENST00000684214.1	2494	23	-3	0	0	0	multi-exon	FALSE	canonical	2	6	junction_21	280.557462330663	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTTGATACCTTTGTTT	0	True	NA	7	True	AATAAA	-1	NA	119452472	119542316	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_119452634_119456314_119456369_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119536422_119536551_119541904
H1_mix_00070071	chr5	+	2652	24	FSM	ENSG00000133835.18	ENST00000510025.7	2628	24	-24	0	0	0	multi-exon	FALSE	canonical	3	1169	junction_10	86.899176743595	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTGTGATTTTCTGT	0	True	NA	23	True	AATAAA	-17	NA	119452472	119542332	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_119452634_119456314_119456369_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
H1_mix_00070072	chr5	+	2599	25	FSM	ENSG00000133835.18	ENST00000645832.1	2589	25	-10	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	358.202512457067	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGTGATAGCATTGATA	4	True	NA	26	True	AATAAA	-29	NA	119452527	119542269	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_119452634_119456314_119456369_119471635_119471701_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
H1_mix_00070073	chr5	+	4449	24	FSM	ENSG00000133835.18	ENST00000683265.1	4449	24	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	411.358669084997	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAAAGTCTTTGTGCTCC	26	True	NA	NA	False	TTTAAA	-5	NA	119452735	119542446	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_119452822_119456314_119456369_119471635_119471701_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
H1_mix_00070076	chr5	+	4673	14	FSM	ENSG00000133835.18	ENST00000683372.1	4673	14	0	0	0	0	multi-exon	FALSE	canonical	3	1183	junction_9	89.6258495045279	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAAAGTCTTTGTGCTCC	NA	False	NA	NA	False	TTTAAA	-5	NA	119491068	119542446	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
H1_mix_00070086	chr5	+	2054	15	FSM	ENSG00000205302.7	ENST00000514949.1	2119	15	65	0	65	0	multi-exon	FALSE	canonical	0	0	junction_1	337.606158663237	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACATGTGGTTTTATAT	203	False	NA	NA	False	AATAAA	-18	NA	122775267	122829755	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_122775763_122795265_122795384_122799691_122799856_122801868_122801936_122802080_122802125_122803471_122803614_122808276_122808356_122815895_122815972_122816914_122817029_122817279_122817374_122818817_122819024_122826049_122826194_122827378_122827460_122827574_122827647_122829597
H1_mix_00070089	chr5	+	1995	7	FSM	ENSG00000064652.11	ENST00000261369.9	1987	7	-8	0	0	0	multi-exon	FALSE	canonical	3	89	junction_6	20.5406101824329	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGAGTTTGTCTTCTCC	1	True	NA	14	True	AATAAA	-16	NA	122845604	123009205	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_122845694_122936733_122936818_122946054_122946160_122999911_123000007_123001404_123001438_123001939_123002005_123007681
H1_mix_00070092	chr5	+	4879	12	NIC	ENSG00000151292.17	novel	4635	13	NA	NA	0	424	combination_of_known_junctions	FALSE	canonical	3	117	junction_8	36.1118556114537	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAATTTAACCTGGCTTG	13	True	NA	NA	False	AATGAA	-41	NA	123512259	123617469	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_123512571_123545416_123545842_123553106_123553148_123557494_123557565_123573392_123573542_123575728_123575964_123588067_123588154_123588426_123588512_123590412_123590559_123591318_123591415_123604723_123604831_123614341
H1_mix_00070093	chr5	+	4510	12	NIC	ENSG00000151292.17	novel	1979	12	NA	NA	-187	-291	combination_of_known_junctions	TRUE	canonical	3	62	junction_8	47.9438376670864	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAAGTAGTTTTTTTA	NA	False	NA	-6	True	AATAAA	-4	NA	123511911	123616749	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_123512571_123545416_123545842_123553106_123553148_123557494_123557565_123573392_123573542_123575728_123575964_123588067_123588154_123588426_123588512_123590409_123590559_123591318_123591415_123604723_123604831_123614341
H1_mix_00070094	chr5	+	4047	13	FSM	ENSG00000151292.17	ENST00000360683.6	4047	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_9	79.4485770098426	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGGGAAATAGCATCATT	204	False	NA	NA	False	ATTAAA	-17	NA	123545633	123617045	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_123545842_123553106_123553148_123557494_123557565_123573392_123573542_123575728_123575964_123588067_123588154_123588426_123588512_123590412_123590559_123591318_123591415_123595038_123595135_123604723_123604831_123605338_123605363_123614341
H1_mix_00070098	chr5	+	3631	5	FSM	ENSG00000164902.14	ENST00000297540.5	3609	5	-22	0	0	0	multi-exon	FALSE	canonical	3	490	junction_4	64.7649596618418	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCTTCAAGTGATTATAT	-19	True	NA	50	True	AATAAA	-24	NA	126600924	126627252	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_126601059_126603569_126604184_126608363_126608485_126617249_126617334_126624574
H1_mix_00070103	chr5	+	6142	2	Intergenic	novelGene_1197	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	301	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTCAGTTAGTTAAGGC	NA	False	NA	NA	False	NA	NA	NA	126839348	126845619	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_126844452_126844580
H1_mix_00070105	chr5	+	5919	3	Intergenic	novelGene_1200	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_2	20.5	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAAGGCCATCTGGGCTTA	NA	False	NA	NA	False	NA	NA	NA	126839371	126845631	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_126844198_126844409_126844494_126844622
H1_mix_00070108	chr5	+	7607	26	FSM	ENSG00000145794.17	ENST00000274473.6	7594	26	-13	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	29.8757426685932	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTAGTGTTTCTTTCTATA	17	True	NA	5	True	AATAAA	-16	NA	127290845	127461222	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_127291057_127299995_127300047_127331290_127331425_127339119_127339222_127340529_127340631_127369909_127370003_127396531_127396779_127398675_127398797_127402545_127402683_127410388_127410602_127417637_127417813_127419119_127419241_127420043_127420208_127422669_127422773_127433362_127433510_127434686_127434822_127435360_127435490_127438438_127438568_127440738_127440868_127442997_127443127_127445456_127445694_127447556_127447685_127449098_127449223_127454565_127454611_127455400_127455608_127457127
H1_mix_00070116	chr5	+	1942	5	FSM	ENSG00000066583.12	ENST00000173527.6	1942	5	0	0	0	0	multi-exon	FALSE	canonical	3	508	junction_3	22.2977016752848	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTGTGATTGAAATTAT	13	True	NA	7	True	ATTAAA	-15	NA	129094748	129114028	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_129095076_129104955_129105076_129105184_129105389_129106945_129107063_129112854
H1_mix_00070117	chr5	+	684	4	FSM	ENSG00000145808.10	ENST00000505791.5	684	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	40.2740611312045	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAAAGTCTTGAGTTTT	-19	True	NA	NA	False	GATAAA	-26	NA	129460280	129527831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_129460483_129509076_129509243_129526283_129526516_129527747
H1_mix_00070124	chr5	+	3663	6	FSM	ENSG00000158985.14	ENST00000360515.7	3591	6	-90	18	-24	0	multi-exon	FALSE	canonical	3	77	junction_5	127.313785585065	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGCCTTTCCTTTAAATT	NA	False	NA	38	True	AATAAA	-19	NA	131263984	131394672	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_131264167_131315975_131316145_131359208_131359548_131385542_131385645_131390992_131391109_131391917
H1_mix_00070125	chr5	+	4404	5	FSM	ENSG00000158985.14	ENST00000505065.2	4404	5	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_1	32.2645316098034	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGCCTTTCCTTTAAATT	-23	True	NA	38	True	AATAAA	-19	NA	131264052	131394672	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_131264167_131315975_131316145_131359208_131359548_131385542_131385645_131390992
H1_mix_00070126	chr5	+	3756	6	NNC	ENSG00000158985.14	novel	3591	6	NA	NA	-28	0	intron_retention	FALSE	canonical	3	270	junction_5	54.9821789309955	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGCCTTTCCTTTAAATT	NA	False	NA	38	True	AATAAA	-19	NA	131263980	131394672	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_131264167_131315975_131316145_131359208_131359548_131385542_131385645_131390992_131391109_131391828
H1_mix_00070133	chr5	+	609	2	FSM	ENSG00000164405.11	ENST00000378665.1	586	2	-23	0	-7	0	multi-exon	FALSE	canonical	3	5784	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACTGTTGTGATATTACA	NA	False	NA	9	True	AATAAA	-13	NA	132866622	132867683	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_132867036_132867487
H1_mix_00070139	chr5	+	4774	19	FSM	ENSG00000170606.16	ENST00000304858.7	4774	19	0	0	0	0	multi-exon	FALSE	canonical	3	1255	junction_6	135.979119675244	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTTCCTTAATTCCATAA	-27	True	NA	31	True	AATAAA	-23	NA	133052012	133106449	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_133052358_133064979_133065038_133067416_133067558_133070373_133070497_133073229_133073330_133073992_133074127_133076653_133076899_133086781_133086859_133088403_133088556_133089054_133089162_133089561_133089696_133091192_133091375_133092699_133092790_133096097_133096251_133097160_133097287_133099544_133099653_133101758_133101879_133103864_133104027_133104232
H1_mix_00070141	chr5	+	690	3	FSM	ENSG00000170606.16	ENST00000514825.1	690	3	0	0	0	0	multi-exon	FALSE	canonical	3	1595	junction_1	43	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTTGTCAACTTTGTTC	4406	False	NA	18	True	ATTAAA	-19	NA	133101595	133104477	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_133101879_133103864_133104027_133104232
H1_mix_00070143	chr5	+	3347	11	FSM	ENSG00000081059.20	ENST00000395029.5	3330	11	-17	0	14	0	multi-exon	FALSE	canonical	3	21	junction_10	11.6811814470969	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTTTCAAAGCCTGAC	-19	True	NA	2	True	AATAAA	-17	NA	134114694	134148210	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_134115156_134115320_134115388_134115908_134116034_134138058_134138165_134138950_134139039_134142184_134142305_134142720_134142884_134142992_134143101_134143591_134143641_134144796_134144870_134146223
H1_mix_00070144	chr5	+	3274	10	FSM	ENSG00000081059.20	ENST00000342854.10	3288	10	14	0	14	0	multi-exon	FALSE	canonical	2	5	junction_9	16.0146537834094	2232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTTTCAAAGCCTGAC	-19	True	NA	2	True	AATAAA	-17	NA	134114694	134148210	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_134115156_134115320_134115388_134115908_134116034_134138058_134138165_134138950_134139039_134142184_134142305_134142720_134142884_134142992_134143101_134143591_134143641_134146223
H1_mix_00070149	chr5	+	7158	12	NIC	ENSG00000043143.22	novel	6757	12	NA	NA	-391	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_11	28.7278480955039	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGGTGTGAGGCTCCA	-26	True	NA	20	True	AATAAA	-16	NA	134525265	134583227	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_134526012_134535857_134535916_134537988_134538084_134552051_134552210_134559829_134559991_134560745_134560958_134562199_134562368_134564493_134564611_134566115_134566581_134573644_134573763_134576767_134576897_134578496
H1_mix_00070150	chr5	+	7122	12	FSM	ENSG00000043143.22	ENST00000681547.2	6757	12	-365	0	-352	0	multi-exon	FALSE	canonical	3	28	junction_11	28.3368171573938	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGGTGTGAGGCTCCA	13	True	NA	20	True	AATAAA	-16	NA	134525304	134583227	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_134526012_134535857_134535916_134537988_134538084_134552051_134552210_134559829_134559991_134560745_134560958_134562199_134562368_134564493_134564611_134566115_134566581_134573644_134573763_134576767_134576897_134578493
H1_mix_00070152	chr5	+	7020	11	FSM	ENSG00000043143.22	ENST00000361895.6	3212	11	-395	-3413	-379	0	multi-exon	FALSE	canonical	3	19	junction_10	28.9006920332369	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGGTGTGAGGCTCCA	-14	True	NA	20	True	AATAAA	-16	NA	134525277	134583227	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_134526012_134535857_134535916_134537988_134538084_134552051_134552210_134559829_134559991_134560745_134560958_134562199_134562368_134564493_134564611_134566115_134566581_134573644_134573763_134578493
H1_mix_00070153	chr5	+	6465	11	FSM	ENSG00000043143.22	ENST00000395003.5	6465	11	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_10	39.1776722126264	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGTGAGGCTCCATTG	-12	True	NA	23	True	AATAAA	-19	NA	134526107	134583230	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_134526287_134535857_134535916_134537988_134538084_134552051_134552210_134559829_134559991_134560745_134560958_134562199_134562368_134564493_134564611_134566115_134566581_134573644_134573763_134578496
H1_mix_00070154	chr5	+	7426	12	NNC	ENSG00000043143.22	novel	2802	11	NA	NA	-3278	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	35.7040174140689	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGGTGTGAGGCTCCA	6364	False	NA	20	True	AATAAA	-16	NA	134532579	134583227	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_134533591_134535857_134535916_134537988_134538084_134552051_134552210_134559829_134559991_134560745_134560958_134562199_134562368_134564493_134564611_134566115_134566581_134573644_134573763_134576767_134576897_134578493
H1_mix_00070159	chr5	+	2027	4	FSM	ENSG00000164615.6	ENST00000678771.1	2027	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	88.0769865263086	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCACTGCACCTGGCCTT	86	False	NA	NA	False	NA	NA	NA	134738494	134751963	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_134738793_134741065_134741524_134743986_134744053_134750758
H1_mix_00070160	chr5	+	1325	3	NIC	ENSG00000164615.6	novel	2171	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_2	104.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTAATGTTAACTCTGC	-4	True	NA	15	True	AATAAA	-16	NA	134738547	134751377	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_134738793_134741062_134741524_134750758
H1_mix_00070161	chr5	+	2171	4	FSM	ENSG00000164615.6	ENST00000297156.4	2171	4	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_2	16.2138486760204	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTCTTTAAGTCTTGATT	-4	True	NA	NA	False	ATTAAA	-23	NA	134738547	134752157	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_134738793_134741062_134741524_134743986_134744053_134750758
H1_mix_00070162	chr5	+	895	3	FSM	ENSG00000164615.6	ENST00000514518.1	895	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	80	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTAATGTTAACTCTGC	31	False	NA	15	True	AATAAA	-16	NA	134738582	134751377	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_134738793_134743986_134744053_134750758
H1_mix_00070164	chr5	+	5646	23	FSM	ENSG00000145833.16	ENST00000354283.8	3821	23	0	-1825	0	0	multi-exon	FALSE	canonical	2	256	junction_19	106.646603011462	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCACTTTCTTAAAATTA	18	False	NA	9	True	AATAAA	-17	NA	134758803	134831121	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_134758956_134763903_134764093_134766916_134767061_134770902_134771000_134773695_134773862_134777573_134777726_134781132_134781247_134781920_134782087_134782944_134783066_134784365_134784542_134785464_134785587_134788512_134788592_134790469_134790553_134794849_134795015_134795987_134796151_134807747_134807942_134811220_134811359_134811695_134811846_134816429_134816604_134817495_134817715_134818859_134819005_134826946_134827021_134828658
H1_mix_00070167	chr5	+	5603	2	FSM	ENSG00000181904.9	ENST00000508791.1	643	2	-150	-4810	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCTATGTTTACTATGTT	16	False	NA	26	True	AATAAA	-16	NA	134846095	134859732	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_134846864_134854897
H1_mix_00070168	chr5	+	2923	3	FSM	ENSG00000181904.9	ENST00000504727.1	2923	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	33	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCTATGTTTACTATGTT	16	False	NA	26	True	AATAAA	-16	NA	134846095	134859732	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_134846213_134854897_134855328_134857356
H1_mix_00070177	chr5	+	6940	7	FSM	ENSG00000113658.18	ENST00000545620.5	6937	7	-3	0	-1	0	multi-exon	FALSE	canonical	3	143	junction_1	43.4117879536576	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATGTGTCTTTTTTTGTT	-36	True	NA	20	True	AATAAA	-14	NA	136132843	136182734	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_136132963_136153591_136154164_136160855_136161108_136163271_136163392_136172433_136172656_136174375_136174633_136177336
H1_mix_00070180	chr5	+	3095	19	FSM	ENSG00000112984.12	ENST00000394894.8	3095	19	0	0	0	0	multi-exon	TRUE	canonical	3	389	junction_8	57.2461923904977	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGAATCAAACATCATTC	-4	True	NA	82	True	ATTAAA	-26	NA	138179111	138187723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_138179203_138179659_138179846_138181421_138181512_138181608_138181729_138182322_138182462_138182585_138182774_138182860_138182991_138183168_138183364_138183469_138183582_138183687_138183757_138183961_138184106_138184238_138184405_138184511_138184677_138184806_138184947_138185094_138185198_138185511_138185711_138185960_138186053_138186293_138186432_138187095
H1_mix_00070186	chr5	+	2131	8	FSM	ENSG00000132563.17	ENST00000378339.7	2131	8	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_5	40.2400957519046	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATTTTGGCCTCTGTGCT	-12	True	NA	30	True	AATAAA	-19	NA	138439056	138446965	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_138439241_138441015_138441089_138441384_138441462_138444414_138444536_138444753_138444868_138445227_138445376_138445467_138445599_138445682
H1_mix_00070188	chr5	+	2099	8	FSM	ENSG00000132563.17	ENST00000254901.9	2099	8	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_5	86.8524434818935	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGCCTCTGTGCTTTGT	18	True	NA	34	True	AATAAA	-23	NA	138439086	138446969	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_138439241_138441015_138441089_138441384_138441462_138444414_138444536_138444753_138444868_138445233_138445376_138445467_138445599_138445682
H1_mix_00070189	chr5	+	709	5	FSM	ENSG00000132563.17	ENST00000510467.5	709	5	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_3	25.043711785596	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGTGGGGAGGGCACCG	20	False	NA	NA	False	NA	NA	NA	138439167	138445118	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_138439241_138441015_138441089_138441384_138441462_138444414_138444536_138444753
H1_mix_00070199	chr5	+	1276	5	FSM	ENSG00000281398.4	ENST00000648842.1	1264	5	-12	0	-12	0	multi-exon	FALSE	canonical	3	61	junction_4	62.1384542775245	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTCGATTTTTTTTTT	263	False	NA	13	True	AATAAA	-17	NA	139274089	139280947	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139279934
H1_mix_00070204	chr5	+	6005	4	FSM	ENSG00000281398.4	ENST00000514110.5	679	4	-13	-5313	0	0	multi-exon	FALSE	canonical	3	168	junction_1	21.3541565040626	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATTTTTTGTCATTAGGG	2	True	NA	12	True	AATAAA	-13	NA	139274117	139284899	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050
H1_mix_00070205	chr5	+	2396	5	FSM	ENSG00000281398.4	ENST00000505522.6	2383	5	-13	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	77.5806032459145	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATTTTTTGTCATTAGGG	2	True	NA	12	True	AATAAA	-13	NA	139274117	139284899	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139282738
H1_mix_00070206	chr5	+	3996	15	NIC	ENSG00000015479.20	novel	5069	15	NA	NA	0	-11	combination_of_known_junctions	FALSE	canonical	3	264	junction_12	710.565831588044	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTAGGCCATGTTAATTG	-5	True	NA	5	True	AATAAA	-7	NA	139293673	139330394	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_139293806_139307238_139308328_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325295_139325663_139326162_139326285_139329344
H1_mix_00070207	chr5	+	5093	15	FSM	ENSG00000015479.20	ENST00000394805.8	5069	15	-24	0	0	0	multi-exon	FALSE	canonical	3	1711	junction_1	426.552057975654	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTTACAGTTCTTTT	2	True	NA	12	True	AATGAA	-20	NA	139293715	139331677	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_139293806_139307238_139308328_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
H1_mix_00070208	chr5	+	2526	14	FSM	ENSG00000015479.20	ENST00000503811.5	2518	14	-8	0	0	0	multi-exon	FALSE	canonical	3	486	junction_1	660.11611852827	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCCTGCTAGATTTCGTA	-1	True	NA	NA	False	AAGAAA	-42	NA	139293741	139330002	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_139294029_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
H1_mix_00070209	chr5	+	4018	15	FSM	ENSG00000015479.20	ENST00000618441.5	4018	15	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_1	683.254550378002	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTATTTGTCAGTTGTGGTT	35	False	NA	52	True	NA	NA	NA	139293777	139330441	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_139294029_139307238_139308328_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
H1_mix_00070213	chr5	+	7306	13	FSM	ENSG00000015479.20	ENST00000505625.5	7306	13	0	0	0	0	multi-exon	FALSE	canonical	3	2144	junction_10	369.296403087457	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACGTATTTGTCAGTTGT	1861	False	NA	48	True	AAGAAA	-44	NA	139310042	139330437	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
H1_mix_00070217	chr5	+	1456	4	FSM	ENSG00000120727.13	ENST00000265192.9	1456	4	0	0	0	0	multi-exon	FALSE	canonical	3	3843	junction_3	248.415422673839	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGATGGTTGTGTTTATTG	-6	True	NA	14	True	AATAAA	-16	NA	139341853	139369717	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_139341981_139363758_139363923_139364563_139364744_139368732
H1_mix_00070219	chr5	+	2259	4	FSM	ENSG00000120727.13	ENST00000394795.6	2297	4	38	0	29	0	multi-exon	FALSE	canonical	2	20	junction_1	1837.06148206555	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTTGTGTTTATTGGTG	5	True	NA	17	True	AATAAA	-19	NA	139342479	139369720	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_139343407_139363758_139363923_139364563_139364744_139368732
H1_mix_00070221	chr5	+	2530	7	FSM	ENSG00000131508.16	ENST00000398733.8	2530	7	0	0	0	0	multi-exon	FALSE	canonical	3	1957	junction_1	302.144005401398	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTCACCTTGTCTTATC	-15	True	NA	10	True	AATAAA	-24	NA	139561338	139628434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_139561816_139600371_139600436_139614585_139614618_139614696_139614775_139614860_139614967_139623367_139623462_139626755
H1_mix_00070223	chr5	+	568	2	FSM	ENSG00000171604.12	ENST00000504944.1	568	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGGCCACTGCGGCTGCA	9166	False	NA	NA	False	NA	NA	NA	139647903	139680830	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_139648005_139680363
H1_mix_00070224	chr5	+	2935	3	FSM	ENSG00000171604.12	ENST00000511048.1	1892	3	-754	-289	-170	0	multi-exon	FALSE	canonical	3	76	junction_1	257	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCGCTGGCTTCTTGCTC	9441	False	NA	35	True	AATAAA	-25	NA	139648178	139683882	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_139649010_139680363_139681448_139682862
H1_mix_00070225	chr5	+	2601	3	FSM	ENSG00000171604.12	ENST00000302517.8	2601	3	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_1	50	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCGCTGGCTTCTTGCTC	-28	True	NA	35	True	AATAAA	-25	NA	139648348	139683882	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_139648846_139680363_139681448_139682862
H1_mix_00070231	chr5	+	8214	34	FSM	ENSG00000131503.21	ENST00000360839.7	8195	34	-19	0	0	0	multi-exon	FALSE	canonical	3	42	junction_30	84.2931393016854	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGAAGTGGGGTGTGATC	-16	True	NA	18	True	AATAAA	-14	NA	140401813	140539849	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140402274_140436103_140436258_140438460_140438618_140440118_140440267_140440994_140441143_140445741_140445976_140449210_140449306_140458624_140458863_140459163_140459356_140464666_140464777_140482579_140482668_140485120_140485249_140485588_140485733_140486957_140487061_140496519_140497279_140504820_140504967_140505121_140505234_140505723_140505870_140506834_140506978_140507784_140507999_140509636_140509813_140510018_140510182_140512827_140512924_140513362_140513480_140524065_140524241_140525995_140526444_140526927_140527075_140527872_140528023_140528183_140529797_140535361_140535539_140537388_140537590_140538085_140538262_140538918_140539084_140539358
H1_mix_00070232	chr5	+	2139	11	FSM	ENSG00000131503.21	ENST00000394723.7	2135	11	-4	0	0	0	multi-exon	FALSE	canonical	3	267	junction_2	32.698012171996	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTTCCTTAGTCTTCT	20	True	NA	20	True	AATAAA	-22	NA	140401849	140472477	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140402274_140436103_140436258_140438460_140438618_140440118_140440267_140440994_140441143_140445741_140445976_140449210_140449306_140458624_140458863_140459163_140459356_140464666_140464777_140472238
H1_mix_00070234	chr5	+	2048	11	FSM	ENSG00000131503.21	ENST00000394722.7	2035	11	-13	0	-13	0	multi-exon	FALSE	canonical	3	13	junction_2	99.6682497087212	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTTCCTTAGTCTTCT	26	False	NA	20	True	AATAAA	-22	NA	140401907	140472477	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140402274_140436103_140436258_140438493_140438618_140440118_140440267_140440994_140441143_140445741_140445976_140449210_140449306_140458624_140458863_140459163_140459356_140464666_140464777_140472238
H1_mix_00070235	chr5	+	8246	36	FSM	ENSG00000254996.5	ENST00000532219.5	8246	36	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_30	88.5058466879968	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATGCCTTGGCTCCA	26	False	NA	1	True	AGTAAA	-6	NA	140401907	140549569	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140402274_140436103_140436258_140438460_140438618_140440118_140440267_140440994_140441143_140445741_140445976_140449210_140449306_140458624_140458863_140459163_140459356_140464666_140464777_140482579_140482668_140485120_140485249_140485588_140485733_140486957_140487061_140496519_140497279_140504820_140504967_140505121_140505234_140505723_140505870_140506834_140506978_140507784_140507999_140509636_140509813_140510018_140510182_140512827_140512924_140513362_140513480_140524065_140524241_140525995_140526444_140526927_140527075_140527872_140528023_140528183_140529797_140535361_140535539_140537388_140537590_140538085_140538262_140538918_140539084_140542171_140542282_140548905_140549077_140549233
H1_mix_00070239	chr5	+	4079	13	FSM	ENSG00000131503.21	ENST00000431508.5	4079	13	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_9	26.6374840320094	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGAAGTGGGGTGTGATC	88	False	NA	18	True	AATAAA	-14	NA	140510109	140539849	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140510182_140512827_140512924_140513362_140513480_140524065_140524241_140525995_140526444_140526927_140527075_140527872_140528023_140528183_140529797_140535361_140535539_140537337_140537590_140538085_140538262_140538918_140539084_140539358
H1_mix_00070242	chr5	+	5446	7	FSM	ENSG00000254996.5	ENST00000474060.1	5446	7	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_5	43.7518253587461	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATGCCTTGGCTCCA	637	False	NA	1	True	AGTAAA	-6	NA	140528825	140549569	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140529797_140535361_140535539_140537337_140537590_140538085_140538262_140538918_140542282_140548905_140549077_140549233
H1_mix_00070243	chr5	+	2243	8	FSM	ENSG00000254996.5	ENST00000437495.1	2243	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	60.4175944099541	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATGCCTTGGCTCCA	725	False	NA	1	True	AGTAAA	-6	NA	140528913	140549569	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140529797_140535361_140535539_140537337_140537590_140538085_140538235_140538918_140539084_140542171_140542282_140548905_140549077_140549233
H1_mix_00070244	chr5	+	2082	8	NIC	ENSG00000254996.5	novel	2243	8	NA	NA	195	7	combination_of_known_junctions	FALSE	canonical	3	63	junction_5	47.3971496602735	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGGCTCCAGTGTTCT	920	False	NA	8	True	AGTAAA	-13	NA	140529108	140549576	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_140529797_140535361_140535539_140537337_140537590_140538085_140538262_140538918_140539084_140542171_140542282_140548905_140549077_140549233
H1_mix_00070246	chr5	+	700	3	FSM	ENSG00000243056.2	ENST00000310331.3	693	3	-7	0	-7	0	multi-exon	FALSE	canonical	3	42	junction_1	34.5	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGGCTCCAGTGTTCT	-3	True	NA	8	True	AGTAAA	-13	NA	140547654	140549576	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140547841_140548905_140549077_140549233
H1_mix_00070247	chr5	+	2675	3	FSM	ENSG00000176087.16	ENST00000323146.8	2666	3	-9	0	0	0	multi-exon	FALSE	canonical	3	456	junction_1	145	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTCTTGTGTCTTCTG	-7	True	NA	19	True	AATAAA	-40	NA	140564818	140569100	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140564859_140565872_140565972_140566564
H1_mix_00070249	chr5	+	1889	12	FSM	ENSG00000113119.13	ENST00000394671.8	1865	12	-24	0	-8	0	multi-exon	FALSE	canonical	3	62	junction_3	14.4159003124391	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACTTTGCCTCAGTGGTT	-25	True	NA	19	True	AATAAA	-19	NA	140639426	140645404	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140639613_140639738_140639852_140641664_140641781_140641869_140642054_140642314_140642420_140642585_140642672_140642924_140643042_140643563_140643676_140643779_140643967_140644099_140644195_140644572_140644741_140644984
H1_mix_00070251	chr5	+	1847	12	FSM	ENSG00000113119.13	ENST00000252100.6	1834	12	-13	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	27.9610118167813	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCTCAGTGGTTGCAC	39	False	NA	23	True	AATAAA	-23	NA	140639490	140645408	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140639613_140639738_140639852_140641664_140641781_140641869_140642054_140642314_140642420_140642585_140642672_140642906_140643042_140643563_140643676_140643779_140643967_140644099_140644195_140644572_140644741_140644984
H1_mix_00070252	chr5	+	1953	10	FSM	ENSG00000113119.13	ENST00000510336.5	1953	10	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	15.3727352040657	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCTCAGTGGTTGCAC	1798	False	NA	23	True	AATAAA	-23	NA	140641305	140645408	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140641781_140641869_140642054_140642314_140642420_140642585_140642672_140642924_140643042_140643563_140643676_140643779_140643967_140644099_140644195_140644572_140644741_140644984
H1_mix_00070254	chr5	+	3852	7	FSM	ENSG00000120314.19	ENST00000358337.10	3852	7	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_5	16.4991582276861	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGACTCTAAGATCTTG	-1	True	NA	26	True	AGTAAA	-19	NA	140664903	140672345	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140665104_140668233_140668335_140668414_140668503_140668611_140668792_140668890_140668991_140669078_140669249_140669332
H1_mix_00070257	chr5	+	2369	12	FSM	ENSG00000112855.17	ENST00000642752.1	2346	12	-23	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	41.7705262057367	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATGTTAAATAAAATATTAA	-35	True	NA	-13	True	NA	NA	NA	140691429	140699280	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140691757_140693590_140693666_140693934_140694055_140694184_140694281_140695507_140695634_140695737_140695846_140696520_140696615_140696942_140697071_140697163_140697407_140697568_140697686_140697931_140698079_140698492
H1_mix_00070261	chr5	+	2821	2	FSM	ENSG00000204967.12	ENST00000672575.1	2808	2	-13	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTTGACTTATTACCTCA	-7	True	NA	NA	False	NA	NA	NA	140807067	140817546	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140809573_140817230
H1_mix_00070262	chr5	+	4624	1	FSM	ENSG00000204965.9	ENST00000614258.1	4248	1	136	-512	103	512	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATAGAAAGTCAGTGATAA	124	False	NA	NA	False	AAGAAA	-30	NA	140821739	140826363	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140821700_140826400
H1_mix_00070264	chr5	+	5383	4	FSM	ENSG00000081842.18	ENST00000529310.6	5395	4	12	0	12	0	multi-exon	FALSE	canonical	0	0	junction_1	68.8202166679401	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGGTGGTCATTTCTAA	4	True	NA	NA	False	AATAAA	-20	NA	140827971	141012347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140830486_140978948_140979008_140982474_140982564_141009626
H1_mix_00070266	chr5	+	18670	4	FSM	ENSG00000249504.3_ENSG00000249158.7	ENST00000398640.7	5407	4	-13266	3	-5533	-3	multi-exon	FALSE	canonical	3	32	junction_1	54.0637483799347	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATGGTGGTCATTTC	7315	False	NA	NA	False	AATAAA	-17	NA	140855690	141012344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140871495_140978948_140979008_140982474_140982564_141009626
H1_mix_00070269	chr5	+	2605	1	FSM	ENSG00000251664.5	ENST00000613593.1	2588	1	-67	50	-67	-50	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTTATTAATATTATTT	6278	False	NA	NA	False	TTTAAA	-14	NA	140875234	140877839	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140875200_140877800
H1_mix_00070270	chr5	+	5516	4	FSM	ENSG00000251664.5	ENST00000398631.3	5401	4	-118	3	-112	-3	multi-exon	FALSE	canonical	3	54	junction_1	44.0479536666827	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATGGTGGTCATTTC	6233	False	NA	NA	False	AATAAA	-17	NA	140875189	141012344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140877840_140978948_140979008_140982474_140982564_141009626
H1_mix_00070271	chr5	+	3242	5	NIC	ENSG00000251664.5	novel	5438	5	NA	NA	1700	-20	combination_of_known_splicesites	FALSE	canonical	3	42	junction_4	49.1750699033565	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAAATGGTGGTATGAAA	1697	False	NA	NA	False	NA	NA	NA	140877009	141012327	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_140877840_140978948_140979008_140982474_140982564_141009626_141009729_141010165
H1_mix_00070272	chr5	+	5674	4	FSM	ENSG00000243232.6	ENST00000289269.7	5725	4	51	0	51	0	multi-exon	FALSE	canonical	3	29	junction_1	55.4396568852618	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGGTGGTCATTTCTAA	-1	True	NA	NA	False	AATAAA	-20	NA	140966526	141012347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140969332_140978948_140979008_140982474_140982564_141009626
H1_mix_00070273	chr5	+	2249	2	FSM	ENSG00000112852.7	ENST00000622947.1	2231	2	-18	0	-18	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTCCTTTTATTAGAAAG	11	False	NA	-83	True	NA	NA	NA	141094587	141097264	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141094832_141095259
H1_mix_00070274	chr5	+	4109	1	FSM	ENSG00000112852.7	ENST00000194155.7	4089	1	-20	0	-11	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTGCTGGAATCAAATA	18	False	NA	14	True	AATAAA	-21	NA	141094594	141098703	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141094600_141098700
H1_mix_00070288	chr5	+	4784	4	FSM	ENSG00000253953.3	ENST00000519479.2	4761	4	-23	0	-23	0	multi-exon	FALSE	canonical	2	12	junction_1	96.1491896308371	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACGTTTCTGTATAAG	4739	False	NA	24	True	AATAAA	-17	NA	141387674	141512975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141390282_141494806_141494866_141505392_141505482_141510946
H1_mix_00070289	chr5	+	4731	4	FSM	ENSG00000276547.2	ENST00000617380.2	4755	4	18	6	18	-6	multi-exon	FALSE	canonical	2	9	junction_1	97.5431528435834	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAGCTGAACGTTTCTG	2	True	NA	18	True	AATAAA	-11	NA	141397964	141512969	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141400525_141494806_141494866_141505392_141505482_141510946
H1_mix_00070290	chr5	+	4601	1	FSM	ENSG00000253305.3	ENST00000616430.1	4601	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAATTATAAGACTTTT	6	True	NA	NA	False	AATAAA	-22	NA	141408020	141412621	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141408000_141412600
H1_mix_00070291	chr5	+	4842	4	FSM	ENSG00000253305.3	ENST00000520790.2	4777	4	-65	0	-65	0	multi-exon	FALSE	canonical	3	21	junction_1	91.9710099252295	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACGTTTCTGTATAAG	5157	False	NA	24	True	AATAAA	-17	NA	141407955	141512975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141410621_141494806_141494866_141505392_141505482_141510946
H1_mix_00070294	chr5	+	4775	4	FSM	ENSG00000254122.3	ENST00000398594.4	4775	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	85.9470120998333	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACGTTTCTGTATAAG	-19	True	NA	24	True	AATAAA	-17	NA	141417676	141512975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141420275_141494806_141494866_141505392_141505482_141510946
H1_mix_00070295	chr5	+	5066	4	FSM	ENSG00000253873.6	ENST00000398587.7	4787	4	-279	0	-275	0	multi-exon	FALSE	canonical	3	39	junction_1	83.6341238171756	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACGTTTCTGTATAAG	3038	False	NA	24	True	AATAAA	-17	NA	141420771	141512975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141423661_141494806_141494866_141505392_141505482_141510946
H1_mix_00070297	chr5	+	4771	4	FSM	ENSG00000240184.7	ENST00000308177.5	4758	4	-13	0	6	0	multi-exon	FALSE	canonical	3	58	junction_1	74.8702581507207	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACGTTTCTGTATAAG	-17	True	NA	24	True	AATAAA	-17	NA	141475952	141512975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141478547_141494806_141494866_141505392_141505482_141510946
H1_mix_00070298	chr5	+	4773	4	FSM	ENSG00000242419.6	ENST00000306593.2	4763	4	-10	0	-10	0	multi-exon	FALSE	canonical	3	13	junction_1	95.6846672960488	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACGTTTCTGTATAAG	-21	True	NA	24	True	AATAAA	-17	NA	141485019	141512975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141487616_141494806_141494866_141505392_141505482_141510946
H1_mix_00070301	chr5	+	2548	7	FSM	ENSG00000164620.9	ENST00000297164.8	2536	7	-12	0	-12	0	multi-exon	TRUE	canonical	3	136	junction_1	32.2783036866699	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGCTTCGCATCCTGGC	4	True	NA	14	True	AATAAA	-17	NA	141636984	141641064	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141638410_141638794_141638861_141638954_141639022_141639463_141639650_141639919_141640296_141640411_141640446_141640670
H1_mix_00070306	chr5	+	1464	8	ISM	ENSG00000081791.9	ENST00000508751.1	998	9	-54	444	1	0	5prime_fragment	FALSE	canonical	3	197	junction_5	12.5795428358579	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATAGAGTGATCTAAGTCT	21	True	NA	14	True	ATTAAA	-25	NA	141923855	141933882	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258
H1_mix_00070308	chr5	+	2286	13	NIC	ENSG00000081791.9	novel	2203	13	NA	NA	-35	0	combination_of_known_splicesites	FALSE	canonical	3	51	junction_12	48.3034390310071	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGTTTAATAAAACAGATAT	-15	True	NA	-12	True	NA	NA	NA	141923819	141940120	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493_141934587_141937197_141937358_141938520_141938761_141939505
H1_mix_00070317	chr5	+	1517	1	FSM	ENSG00000261757.1	ENST00000566527.1	1640	1	-94	217	-94	-217	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTATCTCCGTATGTGT	288	False	NA	NA	False	TTTAAA	-34	NA	142703687	142705204	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_142703700_142705200
H1_mix_00070319	chr5	+	2363	5	FSM	ENSG00000236714.3	ENST00000658433.1	2360	5	-3	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	9.61769203083567	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGTGTCTATAAATTTT	-4	True	NA	6	True	CATAAA	-19	NA	142745596	142760998	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_142745719_142753100_142753228_142756706_142756831_142757826_142757904_142759085
H1_mix_00070330	chr5	+	3654	21	FSM	ENSG00000113649.13	ENST00000394421.7	3632	21	-22	0	0	0	multi-exon	FALSE	canonical	3	524	junction_11	101.328611457969	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGGGGTTTGTTTTGTTT	-12	True	NA	NA	False	AAGAAA	-6	NA	146447310	146511023	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_146447409_146455055_146455282_146457182_146457336_146458883_146459338_146463550_146463794_146469543_146469745_146470635_146470749_146471487_146471577_146478492_146478654_146479854_146479912_146480027_146480095_146482591_146482728_146483539_146483630_146492919_146493039_146498535_146498687_146503374_146503540_146503823_146504007_146507027_146507208_146507872_146507957_146509144_146509246_146510440
H1_mix_00070331	chr5	+	4665	22	FSM	ENSG00000113649.13	ENST00000296702.9	4654	22	-11	0	-10	0	multi-exon	FALSE	canonical	3	216	junction_6	179.52344322307	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATGTTAATAGAATAA	NA	False	NA	NA	False	AATAAA	-14	NA	146447300	146511961	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_146447409_146455055_146455282_146457182_146457336_146458883_146459338_146463550_146463794_146468340_146468404_146469543_146469745_146470635_146470749_146471487_146471577_146478492_146478654_146479854_146479912_146480027_146480095_146482591_146482728_146483539_146483630_146492919_146493039_146498535_146498687_146503374_146503540_146503823_146504007_146507027_146507208_146507872_146507957_146509144_146509246_146510440
H1_mix_00070332	chr5	+	4706	23	FSM	ENSG00000113649.13	ENST00000679501.2	4684	23	-22	0	0	0	multi-exon	FALSE	canonical	3	102	junction_13	243.53225387551	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATGTTAATAGAATAA	-12	True	NA	NA	False	AATAAA	-14	NA	146447310	146511961	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_146447409_146455055_146455282_146457182_146457336_146458883_146459338_146463550_146463794_146468340_146468404_146469543_146469745_146470635_146470749_146471487_146471577_146478492_146478654_146479854_146479912_146480027_146480095_146481149_146481201_146482591_146482728_146483539_146483630_146492919_146493039_146498535_146498687_146503374_146503540_146503823_146504007_146507027_146507208_146507872_146507957_146509144_146509246_146510440
H1_mix_00070334	chr5	+	4138	22	NIC	ENSG00000113649.13	novel	4684	23	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	102	junction_12	208.241160562414	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCTGTATTGTATATGAT	13	False	NA	15	True	AATAAA	-15	NA	146447359	146511505	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_146447409_146455055_146455282_146457182_146457336_146458883_146459338_146463550_146463794_146469543_146469745_146470635_146470749_146471487_146471577_146478492_146478654_146479854_146479912_146480027_146480095_146481149_146481201_146482591_146482728_146483539_146483630_146492919_146493039_146498535_146498687_146503374_146503540_146503823_146504007_146507027_146507208_146507872_146507957_146509144_146509246_146510440
H1_mix_00070336	chr5	+	3787	11	FSM	ENSG00000113649.13	ENST00000506524.5	3787	11	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_9	270.820309430441	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTATTGTATATGATTAT	NA	False	NA	18	True	AATAAA	-18	NA	146481175	146511508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_146482728_146483539_146483630_146492919_146493039_146498535_146498687_146503374_146503540_146503823_146504007_146507027_146507208_146507872_146507957_146509144_146509246_146510066_146510161_146510440
H1_mix_00070338	chr5	+	1846	4	FSM	ENSG00000113649.13	ENST00000511077.1	1846	4	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	313.098848431113	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCTGTATTGTATATGAT	NA	False	NA	15	True	AATAAA	-15	NA	146507370	146511505	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_146507957_146509144_146509246_146510066_146510161_146510440
H1_mix_00070343	chr5	+	2343	3	FSM	ENSG00000286468.1	ENST00000660170.1	2387	3	44	0	44	0	multi-exon	FALSE	canonical	3	55	junction_1	28.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTCAATAAAATGGGTTAA	NA	False	NA	NA	False	NA	NA	NA	147093302	147097240	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_147093462_147093948_147094057_147095164
H1_mix_00070346	chr5	+	624	1	FSM	ENSG00000272239.1	ENST00000607270.1	237	1	-393	6	-393	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAAGATTCATCCTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	147401366	147401990	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_147401400_147402000
H1_mix_00070349	chr5	+	740	4	FSM	ENSG00000280780.3	ENST00000630514.2	720	4	-20	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	85.2655981168386	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGCACTGGACAAAAGGTA	-1	True	NA	NA	False	NA	NA	NA	147559993	147660814	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_147560138_147594359_147594478_147595424_147595541_147660452
H1_mix_00070353	chr5	+	1122	4	NNC	ENSG00000164265.9	novel	672	3	NA	NA	-811	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	413.629732436579	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTCGTCCTATTTTT	NA	False	NA	13	True	AATAAA	-13	NA	147869870	147882191	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_147870480_147872176_147872322_147881445_147881649_147882026
H1_mix_00070354	chr5	+	1510	4	NNC	ENSG00000164265.9	novel	549	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	315	junction_1	282.35556779824	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCAGTCGTCCTATTTT	NA	False	NA	12	True	AATAAA	-12	NA	147870681	147882190	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_147871680_147872176_147872322_147881445_147881649_147882026
H1_mix_00070355	chr5	+	1431	4	NNC	ENSG00000164265.9	novel	440	3	NA	NA	-846	0	at_least_one_novel_splicesite	FALSE	canonical	3	106	junction_1	369.305955663984	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCAGTCGTCCTATTTT	NA	False	NA	12	True	AATAAA	-12	NA	147869835	147882190	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_147870755_147872176_147872322_147881445_147881649_147882026
H1_mix_00070356	chr5	+	568	3	FSM	ENSG00000164265.9	ENST00000507160.5	549	3	-20	1	-20	-1	multi-exon	FALSE	canonical	3	95	junction_1	455.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCAGTCGTCCTATTT	NA	False	NA	11	True	AATAAA	-11	NA	147871477	147882189	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_147871680_147881445_147881649_147882026
H1_mix_00070357	chr5	+	464	3	NNC	ENSG00000164265.9	novel	672	3	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	103	junction_1	451.5	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTCGTCCTATTTTT	NA	False	NA	13	True	AATAAA	-13	NA	147872022	147882191	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_147872119_147881445_147881649_147882026
H1_mix_00070359	chr5	+	516	3	FSM	ENSG00000164265.9	ENST00000296694.5	516	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	477	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTCGTCCTATTTTT	0	True	NA	13	True	AATAAA	-13	NA	147878710	147882191	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_147878859_147881445_147881649_147882026
H1_mix_00070362	chr5	+	4132	22	FSM	ENSG00000145868.17	ENST00000394370.7	4132	22	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_15	22.306563304102	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGCCTTGGACCTGAA	2	True	NA	21	True	AATAAA	-18	NA	148384001	148442836	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_148384040_148394713_148394905_148398998_148399133_148401981_148402146_148402347_148402514_148404684_148404823_148406256_148406395_148409123_148409218_148410634_148410766_148414135_148414307_148415927_148416071_148416993_148417205_148423997_148424118_148425521_148425702_148427212_148427723_148433423_148433525_148433634_148433738_148438331_148438499_148439646_148439793_148440423_148440528_148441123_148441238_148441968
H1_mix_00070368	chr5	+	4289	4	FSM	ENSG00000164284.15	ENST00000507562.1	4109	4	-180	0	9	0	multi-exon	FALSE	canonical	3	7	junction_1	148.553768791715	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGTTTAGAGTCTT	421	False	NA	17	True	AATAAA	-22	NA	149345438	149354583	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_149345826_149348271_149348426_149349653_149349736_149350917
H1_mix_00070369	chr5	+	4020	4	FSM	ENSG00000164284.15	ENST00000329271.8	4020	4	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_1	11.6141675934562	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGTTTAGAGTCTT	-11	True	NA	17	True	AATAAA	-22	NA	149345498	149354583	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_149345617_149348271_149348426_149349653_149349736_149350917
H1_mix_00070370	chr5	+	2507	6	FSM	ENSG00000145882.11	ENST00000274569.9	2507	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	2.31516738055805	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGACCTGTTCTTTTCT	17	True	NA	11	True	AGTAAA	-16	NA	149358045	149369653	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_149358157_149362636_149362844_149364035_149364211_149365941_149366154_149367359_149367501_149367992
H1_mix_00070375	chr5	+	5227	21	FSM	ENSG00000113716.13	ENST00000503427.5	5275	21	48	0	48	0	multi-exon	TRUE	canonical	1	1	junction_7	41.5925474093617	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAAGAGCATCCCCTTC	NA	False	NA	NA	False	NA	NA	NA	150000368	150052823	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_150001180_150004850_150004990_150006472_150006648_150010110_150010609_150012254_150012354_150018565_150018698_150024261_150024409_150024504_150024681_150026705_150026882_150027019_150027118_150030740_150030840_150032453_150032604_150036635_150036938_150037399_150037528_150040747_150040880_150041784_150041970_150045465_150045686_150047623_150047758_150048568_150048686_150050251_150050462_150051724
H1_mix_00070376	chr5	+	5258	20	FSM	ENSG00000113716.13	ENST00000502717.6	5258	20	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_3	30.5914912219077	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTTTGGTGTAGCAGG	2	True	NA	14	True	AATAAA	-14	NA	150000738	150053128	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_150001180_150004850_150004990_150006472_150006648_150010110_150010609_150012254_150012354_150018565_150018698_150024261_150024681_150026705_150026882_150027019_150027118_150030740_150030840_150032453_150032604_150036635_150036938_150037399_150037528_150040747_150040880_150041784_150041970_150045465_150045686_150047623_150047758_150048568_150048686_150050251_150050462_150051724
H1_mix_00070378	chr5	+	5237	11	ISM	ENSG00000113716.13	ENST00000502717.6	5258	20	27846	0	1522	0	3prime_fragment	FALSE	canonical	3	116	junction_1	23.4522919988644	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTTTGGTGTAGCAGG	NA	False	NA	14	True	AATAAA	-14	NA	150028584	150053128	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_150030840_150032453_150032604_150036635_150036938_150037399_150037528_150040747_150040880_150041784_150041970_150045465_150045686_150047623_150047758_150048568_150048686_150050251_150050462_150051724
H1_mix_00070382	chr5	+	4849	26	FSM	ENSG00000070814.22	ENST00000439160.6	4644	26	-41	-164	1	0	multi-exon	FALSE	canonical	0	0	junction_15	267.300861203252	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTCCTCTCGTCAGTTCT	-30	True	NA	-63	True	NA	NA	NA	150357672	150400206	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150372005_150372237_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150387901_150388089_150389886_150390024_150391956_150392177_150392704_150392791_150393371_150393553_150396281_150396843_150398353_150398452_150399021_150399071_150399809
H1_mix_00070383	chr5	+	4825	26	FSM	ENSG00000070814.22	ENST00000445265.6	4825	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	260.71693769297	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCTCCCAGTGCATCTG	-37	True	NA	23	True	AATAAA	-18	NA	150357665	150400292	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150387901_150388089_150389886_150390024_150391543_150391658_150391956_150392177_150392704_150392791_150393371_150393553_150396281_150396843_150398353_150398452_150399021_150399071_150399809
H1_mix_00070385	chr5	+	5105	27	FSM	ENSG00000070814.22	ENST00000377797.7	5095	27	-10	0	0	0	multi-exon	TRUE	canonical	0	0	junction_15	255.477615712566	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGGGCACATGTTTCTT	NA	False	NA	38	True	AATAAA	-33	NA	150357628	150400307	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150372005_150372237_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150387901_150388089_150389886_150390024_150391543_150391658_150391956_150392177_150392707_150392791_150393371_150393553_150396281_150396843_150398353_150398452_150399021_150399071_150399809
H1_mix_00070386	chr5	+	4838	26	FSM	ENSG00000070814.22	ENST00000323668.11	4832	26	-6	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	287.527250882416	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGGCACATGTTTCTTG	-37	True	NA	39	True	AATAAA	-34	NA	150357665	150400308	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150387901_150388089_150389886_150390024_150391543_150391658_150391956_150392177_150392707_150392791_150393371_150393553_150396281_150396843_150398353_150398452_150399021_150399071_150399809
H1_mix_00070387	chr5	+	3539	19	NIC	ENSG00000070814.22	novel	3526	19	NA	NA	-10	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	342.076217952796	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCAACATCGGTAACTCC	-16	True	NA	-4	True	AGTAAA	-10	NA	150357686	150384246	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150372005_150372237_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150383061_150383173_150383737
H1_mix_00070388	chr5	+	3421	18	FSM	ENSG00000070814.22	ENST00000394269.7	3400	18	-21	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	307.560430948328	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACATCGGTAACTCCCTG	-6	True	NA	-1	True	AGTAAA	-13	NA	150357696	150384249	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150372005_150372237_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150383737
H1_mix_00070389	chr5	+	3533	19	FSM	ENSG00000070814.22	ENST00000513538.2	3526	19	-7	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	354.334139053472	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGGTAACTCCCTGTATT	-6	True	NA	3	True	AGTAAA	-17	NA	150357696	150384253	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150372005_150372237_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150383064_150383173_150383737
H1_mix_00070390	chr5	+	3981	23	NNC	ENSG00000070814.22	novel	4800	26	NA	NA	0	-251	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	336.735212453027	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCCAGGAGCAAGAAGAAGA	1	True	NA	NA	False	NA	NA	NA	150357703	150396573	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150372005_150372237_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150387901_150388089_150389886_150390024_150391956_150392177_150392707_150392791_150393371_150393532_150396281
H1_mix_00070393	chr5	+	4822	26	FSM	ENSG00000070814.22	ENST00000427724.7	4800	26	-22	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	293.131981196184	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTCCTCTCGTCAGTTCT	-6	True	NA	-63	True	NA	NA	NA	150357696	150400206	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150372005_150372237_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150387901_150388089_150389886_150390024_150391956_150392177_150392707_150392791_150393371_150393553_150396281_150396843_150398353_150398452_150399021_150399071_150399809
H1_mix_00070394	chr5	+	4605	27	NNC	ENSG00000070814.22	novel	5095	27	NA	NA	0	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	300.00372778749	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTCGCTCCACAGAAGAA	-6	True	NA	NA	False	ACTAAA	-10	NA	150357696	150399896	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150372005_150372237_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150387901_150388089_150389886_150390024_150391543_150391658_150391956_150392177_150392707_150392791_150393371_150393532_150396281_150396843_150398353_150398452_150399021_150399071_150399809
H1_mix_00070399	chr5	+	8175	15	NIC	ENSG00000070614.15	novel	777	2	NA	NA	-74	0	combination_of_known_junctions	FALSE	canonical	2	55	junction_1	28.8405185495005	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGGTCCTGTCTGACC	330	False	NA	18	True	AATAAA	-18	NA	150485743	150558211	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_150486004_150520867_150521768_150527803_150528299_150532944_150533033_150534866_150535022_150535699_150535886_150539227_150539357_150540081_150540265_150541569_150541667_150542847_150542972_150545311_150545487_150548217_150548389_150549677_150549788_150551752_150551856_150553212
H1_mix_00070406	chr5	+	4880	6	NNC	ENSG00000164591.14	novel	665	3	NA	NA	-1076	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28.1211664053965	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAGTAAAATGTGAAGTG	6691	False	NA	NA	False	AATAAA	-16	NA	150668016	150679363	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_150669181_150669950_150670639_150671596_150671651_150671754_150671909_150672339_150672503_150676706
H1_mix_00070409	chr5	+	3680	3	FSM	ENSG00000164591.14	ENST00000521300.1	665	3	0	-3015	0	604	multi-exon	FALSE	canonical	3	52	junction_2	12	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCCATCTCAAAATAAATAAA	55	False	NA	NA	False	NA	NA	NA	150671657	150679972	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_150671909_150672339_150672503_150676706
H1_mix_00070411	chr5	+	3290	2	FSM	ENSG00000164591.14	ENST00000456566.2	3290	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAGTAAAATGTGAAGTG	567	False	NA	NA	False	AATAAA	-16	NA	150672651	150679363	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_150673285_150676706
H1_mix_00070422	chr5	+	1699	12	FSM	ENSG00000145907.16	ENST00000522761.6	1691	12	-8	0	0	0	multi-exon	FALSE	canonical	3	192	junction_1	835.44150746578	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGCTCCCTCTCCCTC	5	True	NA	50	True	TATAAA	-43	NA	151771929	151804237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_151772033_151786571_151786716_151790322_151790405_151790888_151791063_151794158_151794250_151795478_151795576_151797226_151797429_151799211_151799314_151799888_151800001_151800217_151800347_151800759_151800870_151803884
H1_mix_00070432	chr5	+	5996	12	FSM	ENSG00000164574.16	ENST00000297107.11	5958	12	-38	0	-35	0	multi-exon	FALSE	canonical	3	79	junction_7	12.5415013534404	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTCTCTGCCTTCTTCCT	113	False	NA	28	True	AGTAAA	-20	NA	154190694	154420984	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_154191026_154294815_154294919_154297940_154298080_154329571_154329739_154376276_154376463_154380447_154380632_154386312_154386431_154404103_154404212_154409540_154409763_154412888_154413006_154415782_154415933_154416813
H1_mix_00070435	chr5	+	792	3	FSM	ENSG00000164576.12	ENST00000440364.6	792	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	129	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTAATCACCTTATCCA	539	False	NA	65	True	ATTAAA	-34	NA	154446544	154456331	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_154446806_154453401_154453501_154455899
H1_mix_00070436	chr5	+	792	2	FSM	ENSG00000164576.12	ENST00000517926.1	792	2	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTATTTCAGCATTCAACA	7072	False	NA	2	True	ATTAAA	-14	NA	154453077	154456268	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_154453501_154455899
H1_mix_00070439	chr5	+	7285	19	FSM	ENSG00000155506.19	ENST00000518297.6	7181	19	-104	0	-104	0	multi-exon	FALSE	canonical	3	254	junction_6	73.4361442611921	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGCTGGTCTTCCATCT	-5	True	NA	33	True	AATAAA	-18	NA	154755272	154817605	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_154756194_154790324_154790387_154790644_154790711_154792621_154792797_154793594_154793724_154793799_154794001_154794099_154794263_154795174_154795320_154799590_154799760_154799872_154800043_154802006_154802400_154803289_154803414_154803539_154803746_154804200_154804308_154805880_154806033_154808458_154808604_154811246_154811357_154811512_154811641_154813886
H1_mix_00070446	chr5	+	2604	7	FSM	ENSG00000155508.14	ENST00000403027.6	2604	7	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	158.436895955456	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGTTTGGTCTTTCATA	5	True	NA	14	True	AATAAA	-23	NA	154858516	154876792	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_154858817_154863206_154863396_154865191_154865386_154870660_154870823_154871729_154871875_154872540_154872652_154875289
H1_mix_00070448	chr5	+	923	6	FSM	ENSG00000155508.14	ENST00000520671.5	923	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	191.341161280055	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGCCTGATCCCAGAGTG	-22	True	NA	NA	False	NA	NA	NA	154858626	154875458	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_154858769_154865191_154865386_154870660_154870823_154871729_154871875_154872540_154872652_154875289
H1_mix_00070449	chr5	+	2446	7	FSM	ENSG00000155508.14	ENST00000285896.11	2446	7	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_1	40.8224475285623	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGTTTGGTCTTTCATA	-22	True	NA	14	True	AATAAA	-23	NA	154858626	154876792	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_154858769_154863206_154863396_154865191_154865386_154870660_154870823_154871729_154871875_154872540_154872652_154875289
H1_mix_00070453	chr5	+	806	6	FSM	ENSG00000082515.18	ENST00000439747.7	784	6	-22	0	0	0	multi-exon	FALSE	canonical	3	1788	junction_1	119.290234302729	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAATGCTTTTTATGATTT	-16	True	NA	9	True	AATAAA	-13	NA	154941072	154966966	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_154941266_154950820_154950939_154956370_154956437_154957134_154957213_154959979_154960050_154966685
H1_mix_00070454	chr5	+	2774	7	FSM	ENSG00000082515.18	ENST00000522038.5	3162	7	0	388	0	-388	multi-exon	FALSE	canonical	3	15	junction_2	727.803411338224	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTAACATCCATGAACAT	13	True	NA	NA	False	NA	NA	NA	154941101	154969023	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_154941139_154941216_154941266_154950802_154950939_154956370_154956437_154957134_154957213_154959979_154960050_154966685
H1_mix_00070460	chr5	+	1289	8	FSM	ENSG00000055163.20	ENST00000622696.4	1294	8	-13	18	0	-18	multi-exon	FALSE	canonical	3	172	junction_1	27.4174084427082	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTATTTCAATAGT	11	True	NA	NA	False	AATAAA	-3	NA	157266122	157304764	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_157266196_157285338_157285479_157287018_157287109_157294782_157294861_157296672_157296775_157300714_157300897_157302793_157302891_157304237
H1_mix_00070461	chr5	+	3673	28	FSM	ENSG00000055163.20	ENST00000435847.6	3673	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	51.5539857147117	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAACAGGGCAGTGTGTG	11	True	NA	NA	False	CATAAA	-19	NA	157266122	157393223	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_157266196_157285338_157285479_157287018_157287109_157294782_157294861_157296672_157296775_157307760_157307866_157309742_157309835_157311663_157311782_157314343_157314464_157314968_157315095_157319761_157319929_157320654_157320803_157323920_157324075_157325481_157325639_157326170_157326268_157327972_157328050_157330741_157330851_157333326_157333447_157339056_157339257_157341069_157341158_157359004_157359149_157360281_157360373_157361467_157361599_157382589_157382663_157383264_157383360_157389188_157389428_157390520_157390669_157392832
H1_mix_00070463	chr5	+	7052	31	NIC	ENSG00000055163.20	novel	6452	31	NA	NA	-167	0	combination_of_known_junctions	TRUE	canonical	2	59	junction_1	40.0339300538375	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACTTGGTCTTGATTCCT	NA	False	NA	NA	False	ATTAAA	-25	NA	157265911	157395594	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_157266585_157285338_157285479_157287018_157287109_157294782_157294861_157296672_157296775_157300714_157300897_157302793_157302891_157304237_157304367_157307760_157307866_157309742_157309835_157311663_157311782_157314343_157314464_157314968_157315095_157319761_157319929_157320654_157320803_157323920_157324075_157325481_157325639_157326170_157326268_157327972_157328050_157330741_157330851_157333326_157333447_157339056_157339257_157341069_157341158_157359004_157359149_157360281_157360373_157361467_157361599_157382589_157382663_157383264_157383360_157389188_157389428_157390520_157390669_157392832
H1_mix_00070468	chr5	+	2220	7	FSM	ENSG00000113312.12	ENST00000682151.1	2208	7	-12	0	0	0	multi-exon	FALSE	canonical	3	608	junction_1	68.0343050722697	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	160009112	160052548	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_160009194_160010499_160010859_160035139_160035201_160036690_160036804_160043132_160043170_160049513_160049663_160051128
H1_mix_00070469	chr5	+	1432	8	FSM	ENSG00000113312.12	ENST00000522793.5	1432	8	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	236.304542348838	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCTGTGGTAATAAAAGC	NA	False	NA	-16	True	NA	NA	NA	160009112	160065511	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_160009191_160010499_160010859_160035139_160035201_160036690_160036804_160043132_160043170_160049513_160049663_160051128_160051184_160064931
H1_mix_00070470	chr5	+	1380	7	FSM	ENSG00000113312.12	ENST00000684137.1	1366	7	-14	0	0	0	multi-exon	FALSE	canonical	3	5	junction_6	271.377146339841	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCTGTGGTAATAAAAGC	NA	False	NA	-16	True	NA	NA	NA	160009112	160065511	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_160009194_160010499_160010859_160035139_160035201_160036690_160036804_160043132_160043170_160049513_160049663_160064931
H1_mix_00070476	chr5	+	907	6	FSM	ENSG00000164611.13	ENST00000520452.5	895	6	-12	0	-12	0	multi-exon	FALSE	canonical	3	79	junction_1	1304.92690983059	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTATTTGTATTAATAAA	13	False	NA	-7	True	TTTAAA	-23	NA	160421891	160428704	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_160422156_160422301_160422404_160422708_160422894_160424236_160424331_160427714_160427874_160428601
H1_mix_00070477	chr5	+	1145	5	FSM	ENSG00000164611.13	ENST00000393964.1	1070	5	-110	35	-55	0	multi-exon	FALSE	canonical	3	2777	junction_4	312.198154222603	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTATTTGTATTAATAAA	2335	False	NA	-7	True	TTTAAA	-23	NA	160421799	160428704	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_160422404_160422708_160422894_160424236_160424331_160427714_160427874_160428601
H1_mix_00070479	chr5	+	3988	10	FSM	ENSG00000022355.18	ENST00000437025.6	4087	10	94	5	-19	-5	multi-exon	FALSE	canonical	3	20	junction_1	10.9251098251394	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATGGAATACTTGACTC	-18	True	NA	3	True	AATAAA	-19	NA	161848537	161899949	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_161848613_161850795_161850885_161854157_161854271_161865720_161865789_161873116_161873338_161875559_161875643_161882557_161882702_161890897_161891051_161895665_161895869_161897110
H1_mix_00070483	chr5	+	2444	7	FSM	ENSG00000113328.19	ENST00000340828.7	2444	7	0	0	0	0	multi-exon	TRUE	canonical	3	3745	junction_3	194.332189819391	1094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTGCTGGGTGGCTTTT	-5	True	NA	16	True	AATAAA	-16	NA	163437594	163445016	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_163437805_163439256_163439521_163441077_163441332_163441885_163441965_163442044_163442144_163442373_163442569_163443673
H1_mix_00070486	chr5	+	766	4	FSM	ENSG00000072571.20	ENST00000517936.1	528	4	-191	-47	103	47	multi-exon	FALSE	canonical	3	178	junction_3	132.093401298728	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGTTCGAGACCAGCCTG	NA	False	NA	NA	False	NA	NA	NA	163460468	163469957	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_163460739_163463855_163463955_163464722_163464803_163469640
H1_mix_00070488	chr5	+	3016	18	FSM	ENSG00000072571.20	ENST00000393915.9	3016	18	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_3	70.6613836679449	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTTTCAGCTTGTATT	-18	True	NA	13	True	AATAAA	-26	NA	163460631	163491941	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_163460739_163463855_163463955_163464722_163464803_163467700_163467749_163469640_163469830_163471184_163471272_163471362_163471464_163473178_163473254_163473378_163473558_163474056_163474206_163475457_163475673_163478683_163478801_163482641_163482789_163483019_163483173_163483267_163483368_163484068_163484246_163490389_163490553_163491111
H1_mix_00070490	chr5	+	2069	7	FSM	ENSG00000038274.17	ENST00000321757.11	2064	7	-5	0	0	0	multi-exon	FALSE	canonical	3	419	junction_1	110.554159678513	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTAGAATGTTACAGTTAC	3	True	NA	37	True	AATAAA	-38	NA	163505613	163519354	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_163505750_163512001_163512197_163513554_163513670_163513841_163513995_163516517_163516712_163517560_163517675_163518192
H1_mix_00070493	chr5	+	4660	23	NIC	ENSG00000113645.15	novel	3562	23	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	3	75	junction_20	17.3544121143504	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCTCTTGCTCTCTTTT	12	False	NA	15	True	AATAAA	-19	NA	168291591	168469759	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_168292272_168371423_168371534_168385210_168385415_168397723_168397801_168399487_168399568_168406197_168406328_168408506_168408654_168409921_168409996_168414347_168414591_168422007_168422098_168423532_168424069_168428032_168428142_168428706_168428788_168430136_168430224_168431251_168431445_168441681_168441835_168444493_168444586_168453967_168454101_168455355_168455521_168460649_168460743_168464710_168464963_168467842_168467965_168468950
H1_mix_00070495	chr5	+	7136	23	FSM	ENSG00000113645.15	ENST00000265293.9	7136	23	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_20	17.4021467280276	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCATGTGTCTTTTCCA	-26	True	NA	7	True	AATAAA	-18	NA	168291644	168472303	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_168292272_168371423_168371534_168385210_168385415_168397723_168397801_168399487_168399568_168406197_168406328_168408506_168408654_168409921_168409996_168414347_168414591_168422007_168422098_168423532_168424069_168428032_168428142_168428706_168428788_168430136_168430224_168431251_168431445_168441681_168441835_168444493_168444586_168453967_168454101_168455355_168455521_168460649_168460743_168464728_168464963_168467839_168467965_168468950
H1_mix_00070497	chr5	+	3429	18	FSM	ENSG00000113645.15	ENST00000524228.5	3408	18	-21	0	0	0	multi-exon	FALSE	canonical	3	76	junction_15	19.1898185230631	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTCCTCTTGCTCTCTT	NA	False	NA	13	True	AATAAA	-17	NA	168406257	168469757	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_168406328_168408506_168408654_168409921_168409996_168414347_168414591_168422007_168422098_168423532_168424069_168428032_168428142_168428706_168428788_168430136_168430224_168431251_168431445_168441681_168441835_168444493_168444586_168453967_168454101_168455355_168455521_168460649_168460743_168464728_168464963_168467842_168467965_168468950
H1_mix_00070503	chr5	+	2546	12	FSM	ENSG00000040275.17	ENST00000265295.9	2529	12	-17	0	0	0	multi-exon	FALSE	canonical	3	357	junction_11	38.4290695753846	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTACTCTCTATAGGTA	-8	True	NA	26	True	AATAAA	-23	NA	169583755	169604778	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_169583890_169588393_169588576_169591047_169591225_169593353_169593549_169594144_169594295_169594393_169594493_169594570_169594682_169596560_169596702_169598475_169598580_169598971_169599160_169601279_169601626_169604059
H1_mix_00070513	chr5	+	3112	9	FSM	ENSG00000094755.17	ENST00000519385.5	1567	9	4	-1549	4	0	multi-exon	FALSE	canonical	1	3	junction_3	1.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGTGGTCATCTATACAA	5	True	NA	7	True	AATAAA	-26	NA	170783728	170814047	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_170783875_170788573_170788669_170789128_170789248_170794230_170794299_170795207_170795426_170797465_170797549_170805715_170805854_170808599_170808753_170811955
H1_mix_00070514	chr5	+	3310	10	FSM	ENSG00000094755.17	ENST00000265294.9	3304	10	-6	0	-6	0	multi-exon	FALSE	canonical	1	2	junction_8	2.0427529234278	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGTGGTCATCTATACAA	-5	True	NA	7	True	AATAAA	-26	NA	170783718	170814047	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_170783875_170788573_170788669_170789128_170789248_170794230_170794299_170795207_170795426_170797465_170797549_170805715_170805854_170808599_170808753_170809567_170809756_170811955
H1_mix_00070516	chr5	+	4674	28	FSM	ENSG00000204764.14	ENST00000523189.6	4440	28	-123	-111	25	111	multi-exon	TRUE	canonical	3	32	junction_15	14.7537630920802	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAGGAACTCAGGGGAAA	10	True	NA	NA	False	NA	NA	NA	170861894	171300126	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_170862052_170878096_170878244_170881805_170881897_170892386_170892554_170896049_170896116_170909660_170909766_170910968_170911135_170914166_170914241_170916464_170916585_170918712_170918860_170919440_170919614_170924356_170924551_170953596_170953703_170968241_170968378_171170129_171170204_171171205_171171287_171183166_171183231_171183321_171183431_171199669_171199774_171205523_171205613_171213630_171213739_171221757_171221841_171240927_171241143_171242681_171242821_171265680_171265848_171293882_171293982_171295886_171296015_171298761
H1_mix_00070523	chr5	+	2677	10	FSM	ENSG00000181163.14	ENST00000678186.1	2674	10	0	-3	0	0	multi-exon	FALSE	canonical	3	707	junction_7	8047.95416377493	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTTCTATTGACTTATTT	NA	False	NA	17	True	AATAAA	-25	NA	171387694	171410887	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171405301_171405404_171406396_171407775_171410526
H1_mix_00070524	chr5	+	886	5	FSM	ENSG00000181163.14	ENST00000677297.1	883	5	0	-3	0	0	multi-exon	FALSE	canonical	1	65	junction_3	8711.00973983499	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTTCTATTGACTTATTT	NA	False	NA	17	True	AATAAA	-25	NA	171387756	171410887	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171407699_171407775_171410526
H1_mix_00070526	chr5	+	2897	10	FSM	ENSG00000181163.14	ENST00000679006.1	1116	10	-71	-1710	0	-1073	multi-exon	FALSE	canonical	3	18185	junction_5	1153.33405052429	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGAATCCTGAGTCATC	NA	False	NA	NA	False	NA	NA	NA	171387756	171409633	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407699
H1_mix_00070527	chr5	+	1913	12	FSM	ENSG00000181163.14	ENST00000678280.1	1913	12	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_10	7685.71947841101	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATGTGTTGTCCAAAAT	NA	False	NA	NA	False	GATAAA	-22	NA	171387826	171410706	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171406396_171407162_171407699_171407775_171410526
H1_mix_00070528	chr5	+	2600	11	FSM	ENSG00000181163.14	ENST00000677467.1	2600	11	0	0	0	0	multi-exon	FALSE	canonical	3	1671	junction_9	5787.62785258347	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATAAAACTCAGTATTTT	NA	False	NA	-15	True	AATATA	-6	NA	171387826	171410855	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171406396_171407775_171410526
H1_mix_00070529	chr5	+	3606	10	FSM	ENSG00000181163.14	ENST00000676625.1	3605	10	-1	0	0	0	multi-exon	FALSE	canonical	3	18185	junction_5	1244.47026758922	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTTAATAAAGTAGCAC	NA	False	NA	-2	True	AATAAA	-6	NA	171387826	171410868	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171407775_171410526
H1_mix_00070530	chr5	+	1940	10	FSM	ENSG00000181163.14	ENST00000676504.1	1936	10	-4	0	0	0	multi-exon	FALSE	canonical	3	18185	junction_5	1219.42955698328	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTAATAAAGTAGCACGG	NA	False	NA	0	True	AATAAA	-8	NA	171387826	171410870	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400926_171405301_171405404_171407699_171407775_171410526
H1_mix_00070531	chr5	+	1242	10	FSM	ENSG00000181163.14	ENST00000351986.10	1237	10	-2	-3	0	0	multi-exon	FALSE	canonical	3	707	junction_7	6278.76010406867	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTTCTATTGACTTATTT	NA	False	NA	17	True	AATAAA	-25	NA	171387826	171410887	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171405301_171405404_171407699_171407775_171410526
H1_mix_00070532	chr5	+	1362	12	FSM	ENSG00000181163.14	ENST00000677357.1	1346	12	-16	0	0	0	multi-exon	FALSE	canonical	3	32	junction_9	7990.83906681492	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTTCTATTGACTTATTT	NA	False	NA	17	True	AATAAA	-25	NA	171387826	171410887	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407128_171407162_171407699_171407775_171410526
H1_mix_00070533	chr5	+	1521	11	FSM	ENSG00000181163.14	ENST00000296930.10	1320	11	-214	13	-60	0	multi-exon	FALSE	canonical	3	18185	junction_5	1182.26310100586	4946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTTCTATTGACTTATTT	NA	False	NA	17	True	AATAAA	-25	NA	171387634	171410887	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407699_171407775_171410526
H1_mix_00070534	chr5	+	1304	12	NNC	ENSG00000181163.14	novel	1346	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	9159.34360310112	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATAAAACTCAGTATTTT	0	True	NA	-15	True	AATATA	-6	NA	171387851	171410855	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400925_171405301_171405404_171407128_171407162_171407699_171407775_171410526
H1_mix_00070536	chr5	+	1382	10	FSM	ENSG00000181163.14	ENST00000518587.2	1382	10	0	0	0	0	multi-exon	FALSE	canonical	3	19193	junction_9	932.916031048698	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTTAATAAAGTAGCAC	0	True	NA	-2	True	AATAAA	-6	NA	171387851	171410868	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407699_171407775_171410526
H1_mix_00070537	chr5	+	1571	10	FSM	ENSG00000181163.14	ENST00000521260.2	1571	10	0	0	0	0	multi-exon	FALSE	canonical	3	18185	junction_4	1011.6003944368	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATAAAGTAGCACGGTTT	0	True	NA	3	True	AATAAA	-11	NA	171387851	171410873	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_171388007_171390050_171390131_171391304_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407699_171407775_171410526
H1_mix_00070538	chr5	+	2464	10	FSM	ENSG00000181163.14	ENST00000677741.1	2459	10	-5	0	0	0	multi-exon	FALSE	canonical	3	18185	junction_4	1231.27198106593	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATAAAGTAGCACGGTTT	0	True	NA	3	True	AATAAA	-11	NA	171387851	171410873	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_171388007_171390050_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407699_171407775_171410526
H1_mix_00070539	chr5	+	1517	9	Fusion	ENSG00000181163.14_ENSG00000156427.8	novel	1237	10	NA	NA	0	-3	multi-exon	FALSE	canonical	0	0	junction_8	8871.2140155322	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGAGGCGAGTGGTGGCT	0	True	NA	NA	False	ATTAAA	-26	NA	171387851	171457623	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171407699_171407775_171410526_171410882_171457157
H1_mix_00070540	chr5	+	2629	11	FSM	ENSG00000181163.14	ENST00000677672.1	2627	11	-2	0	-2	0	multi-exon	FALSE	canonical	2	21	junction_1	7948.21517637765	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGGTTTCTATTGACTTA	766	False	NA	14	True	AATAAA	-22	NA	171388617	171410884	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_171388798_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171406396_171407775_171410526
H1_mix_00070541	chr5	+	1353	10	FSM	ENSG00000181163.14	ENST00000677907.1	1335	10	-18	0	-2	0	multi-exon	FALSE	canonical	2	21	junction_1	8332.35091542464	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAATATTCTCTCTGGAG	766	False	NA	128	True	NA	NA	NA	171388617	171410998	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_171388798_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171405301_171405404_171407699_171407775_171410526
H1_mix_00070542	chr5	+	2252	11	FSM	ENSG00000181163.14	ENST00000677325.1	2258	11	6	0	-2	0	multi-exon	FALSE	canonical	2	21	junction_1	6242.98868251417	2140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATTCCTTTTTGTTTAA	766	False	NA	-34	True	NA	NA	NA	171388617	171411810	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_171388798_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407699_171407775_171410526
H1_mix_00070544	chr5	+	2537	4	FSM	ENSG00000181163.14	ENST00000677682.1	2534	4	0	-3	0	0	multi-exon	FALSE	canonical	3	1671	junction_2	8830.67405254108	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTTCTATTGACTTATTT	2411	False	NA	17	True	AATAAA	-25	NA	171400229	171410887	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_171400926_171405301_171405404_171406396_171407775_171410526
H1_mix_00070545	chr5	+	1995	5	FSM	ENSG00000156427.8	ENST00000274625.6	1998	5	0	3	0	-3	multi-exon	FALSE	canonical	2	5	junction_2	1.08972473588517	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGAGGCGAGTGGTGGCT	0	True	NA	NA	False	ATTAAA	-26	NA	171419646	171457623	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_171420232_171420406_171420444_171436092_171436274_171449146_171449254_171456538
H1_mix_00070549	chr5	+	3621	2	FSM	ENSG00000113719.17	ENST00000523215.1	3621	2	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTATGGTGTGATTCT	9648	False	NA	26	True	ATTAAA	-15	NA	172933661	172952680	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_172935311_172950708
H1_mix_00070551	chr5	+	722	4	FSM	ENSG00000037241.7	ENST00000265100.6	722	4	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_1	191.628691890217	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCCTTTGCCAGTCTTTT	-23	True	NA	11	True	AATAAA	-17	NA	172959423	172969771	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_172959469_172959864_172960042_172968458_172968600_172969412
H1_mix_00070552	chr5	+	679	4	FSM	ENSG00000037241.7	ENST00000519239.5	679	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	379.484152794583	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTCCACATAGTATTTGC	13	True	NA	20	True	AATAAA	-17	NA	172959459	172969718	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_172959515_172959864_172960042_172968458_172968600_172969412
H1_mix_00070553	chr5	+	738	3	FSM	ENSG00000037241.7	ENST00000519156.1	493	3	-245	0	0	0	multi-exon	FALSE	canonical	3	852	junction_2	16.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAGAGAAAGGCAAATA	5	False	NA	-27	True	NA	NA	NA	172959519	172969487	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_172960042_172968458_172968600_172969412
H1_mix_00070556	chr5	+	773	3	FSM	ENSG00000113732.9	ENST00000265093.4	773	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	820.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGCTCGGTGTTTGTAA	9	True	NA	34	True	AATAAA	-24	NA	172983815	173034892	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_172983965_173020237_173020368_173034398
H1_mix_00070559	chr5	+	1295	7	FSM	ENSG00000113734.18	ENST00000231668.13	1339	7	44	0	44	0	multi-exon	FALSE	canonical	3	16	junction_2	62.9197019135413	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGATTTTATTTAATAGA	NA	False	NA	-12	True	AAGAAA	-34	NA	173144485	173164340	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_173144630_173146865_173146959_173151565_173151695_173154321_173154414_173158743_173158846_173159932_173160052_173163724
H1_mix_00070567	chr5	+	4066	11	FSM	ENSG00000164466.13	ENST00000321442.10	4066	11	0	0	0	0	multi-exon	FALSE	canonical	3	607	junction_9	90.4416386406173	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTCTTTTATTTGTACA	-6	True	NA	-14	True	AATAAA	-18	NA	175478559	175529742	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_175478640_175492094_175492268_175509031_175509203_175510108_175510208_175511450_175511527_175512110_175512197_175513462_175513591_175516613_175516664_175521918_175521969_175522374_175522423_175526637
H1_mix_00070570	chr5	+	3305	10	FSM	ENSG00000170085.18	ENST00000429602.7	3305	10	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_5	12.9957257930786	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAAGTTCAGTGTGACTC	-6	True	NA	8	True	AATAAA	-21	NA	176238423	176345989	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_176238638_176289653_176290956_176295029_176295263_176296250_176296321_176313690_176313846_176322272_176322426_176324628_176324758_176336719_176336877_176337061_176337147_176345182
H1_mix_00070577	chr5	+	617	3	FSM	ENSG00000113194.13	ENST00000513627.1	656	3	0	39	0	-39	multi-exon	FALSE	canonical	3	342	junction_1	18	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTGGGCAGCAAAGCGAG	NA	False	NA	NA	False	NA	NA	NA	176494021	176496947	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_176494085_176494183_176494276_176496485
H1_mix_00070580	chr5	+	2492	9	FSM	ENSG00000048140.18	ENST00000508164.6	2475	9	-17	0	0	0	multi-exon	FALSE	canonical	3	289	junction_8	49.8395864248491	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCATGTGTCTTGCATT	-20	True	NA	35	True	AATAAA	-15	NA	176647466	176659051	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_176647703_176651615_176651667_176651753_176651901_176652742_176652914_176654894_176655021_176656077_176656126_176656699_176656817_176656894_176656957_176657517
H1_mix_00070582	chr5	+	4445	8	FSM	ENSG00000048140.18	ENST00000514705.5	4445	8	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_7	53.2805436020562	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCATGTGTCTTGCATTTT	10	True	NA	37	True	AATAAA	-17	NA	176647496	176659053	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_176647703_176651615_176651667_176651753_176651901_176652742_176655021_176656077_176656126_176656699_176656817_176656894_176656957_176657517
H1_mix_00070583	chr5	+	2368	9	FSM	ENSG00000048140.18	ENST00000515708.5	2361	9	-7	0	0	0	multi-exon	FALSE	canonical	3	38	junction_8	130.830042421456	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCATGTGTCTTGCATTTT	74	False	NA	37	True	AATAAA	-17	NA	176647560	176659053	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_176647703_176651615_176651667_176651753_176651901_176652742_176652914_176654894_176655021_176656077_176656126_176656699_176656817_176656894_176656925_176657517
H1_mix_00070588	chr5	+	2322	7	FSM	ENSG00000113761.12	ENST00000511834.5	2306	7	-16	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	50.1356493259371	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCCAGACTACAACTTAACA	13	True	NA	24	True	AATAAA	-15	NA	177022715	177065965	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_177022914_177041125_177041230_177041777_177041871_177044388_177044534_177050702_177050937_177062057_177062152_177064511
H1_mix_00070589	chr5	+	2793	9	FSM	ENSG00000113761.12	ENST00000503039.1	2774	9	-19	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	60.8069434768761	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAGAGGA	13	True	NA	NA	False	AATAAA	-9	NA	177022715	177081189	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_177022914_177023159_177023235_177041125_177041230_177041777_177041871_177044388_177044534_177050750_177050937_177062057_177062152_177064511_177064602_177079381
H1_mix_00070591	chr5	+	3103	18	FSM	ENSG00000160867.15	ENST00000292408.9	3093	18	-10	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	94.0906211197427	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCTGAGCAACATGGAGT	-4	True	NA	34	True	AATAAA	-19	NA	177086904	177098144	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_177087078_177089549_177089694_177090389_177090654_177090744_177090826_177090937_177091105_177091684_177091809_177092320_177092512_177092645_177092785_177093137_177093332_177093405_177093552_177093653_177093776_177095329_177095441_177095532_177095724_177096056_177096180_177096286_177096358_177096603_177096742_177097291_177097398_177097526
H1_mix_00070592	chr5	+	3103	18	NIC	ENSG00000160867.15	novel	3093	18	NA	NA	-59	0	combination_of_known_junctions	TRUE	canonical	3	99	junction_1	85.1854480156864	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCTGAGCAACATGGAGT	NA	False	NA	34	True	AATAAA	-19	NA	177086845	177098144	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_177087019_177089549_177089694_177090389_177090654_177090744_177090826_177090937_177091105_177091684_177091809_177092320_177092512_177092645_177092785_177093137_177093332_177093405_177093552_177093653_177093776_177095329_177095441_177095532_177095724_177096056_177096180_177096286_177096358_177096603_177096742_177097291_177097398_177097526
H1_mix_00070597	chr5	+	831	4	NIC	ENSG00000165671.22	novel	1436	6	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_3	63.6727745761265	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCCTGCTGTTCTTTAAA	8	True	NA	NA	False	ATTAAA	-17	NA	177131839	177137404	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_177131935_177135086_177135201_177135940_177136031_177136872
H1_mix_00070598	chr5	+	7955	24	NNC	ENSG00000165671.22	novel	12136	24	NA	NA	40	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	47.7870987327438	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGAATTCAATTCCGCT	28	False	NA	12	True	AATAAA	-20	NA	177133118	177295762	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_177133403_177135086_177135201_177135940_177136031_177191883_177192020_177204119_177204293_177209635_177212196_177235820_177235946_177238236_177238508_177239755_177239866_177244194_177244271_177246677_177246797_177248180_177248325_177251729_177251854_177256950_177257152_177259988_177260169_177267561_177267719_177269601_177269808_177273671_177273785_177280564_177280835_177282464_177282582_177283786_177283929_177288818_177288926_177291953_177292159_177293831
H1_mix_00070599	chr5	+	13152	23	FSM	ENSG00000165671.22	ENST00000439151.7	13042	23	-113	3	60	-3	multi-exon	FALSE	canonical	3	134	junction_1	29.2879689286735	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATATGGCCCTTGCCCTGT	26	False	NA	24	True	AGTAAA	-15	NA	177133659	177300210	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_177133953_177135086_177136031_177191883_177192020_177204119_177204293_177209635_177212196_177235820_177235946_177238236_177238508_177239755_177239866_177244194_177244271_177246677_177246797_177248180_177248325_177251729_177251854_177256950_177257152_177259988_177260169_177267561_177267719_177269601_177269808_177273671_177273785_177280564_177280835_177282464_177282582_177283786_177283929_177288818_177288926_177291953_177292159_177293831
H1_mix_00070600	chr5	+	1414	2	FSM	ENSG00000165671.22	ENST00000602285.1	1414	2	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGGTTTTGGCCTGCCAG	14	True	NA	NA	False	ATTAAA	-14	NA	177133797	177136345	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_177133953_177135086
H1_mix_00070601	chr5	+	12274	24	FSM	ENSG00000165671.22	ENST00000689345.1	12113	24	-102	-59	0	-3	multi-exon	FALSE	canonical	3	134	junction_1	29.3864158527876	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATATGGCCCTTGCCCTGT	14	True	NA	24	True	AGTAAA	-15	NA	177133797	177300210	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_177133953_177135086_177135201_177135940_177136031_177191883_177192020_177204119_177204293_177209635_177212196_177235820_177235946_177238236_177238508_177239755_177239866_177244194_177244271_177246677_177246797_177248180_177248325_177251729_177251854_177256950_177257152_177259988_177260169_177267561_177267719_177269601_177269808_177273671_177273785_177280564_177280835_177282464_177282582_177283786_177283929_177288818_177288926_177291953_177292159_177293831
H1_mix_00070604	chr5	+	1193	5	FSM	ENSG00000169230.10	ENST00000503216.5	1171	5	-22	0	0	0	multi-exon	FALSE	canonical	3	149	junction_4	2166.80783354224	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCCCCAGCTCTGGAGT	5	True	NA	14	True	AATAAA	-16	NA	177303798	177306949	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_177304078_177304624_177304851_177305870_177305985_177306097_177306177_177306454
H1_mix_00070606	chr5	+	608	4	FSM	ENSG00000169230.10	ENST00000503853.1	608	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	2408.99997693833	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCCTCCCTTCATTG	93	False	NA	-16	True	NA	NA	NA	177304687	177306614	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_177304851_177305870_177305985_177306097_177306177_177306362
H1_mix_00070609	chr5	+	2329	8	FSM	ENSG00000169220.18	ENST00000425155.6	2329	8	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	32.2464995727269	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTTGTCTTCCTTGTG	9428	False	NA	9	True	NA	NA	NA	177367313	177372596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_177368267_177368716_177368921_177370587_177370665_177370904_177371032_177371164_177371247_177371349_177371397_177371474_177371590_177371872
H1_mix_00070610	chr5	+	1762	10	ISM	ENSG00000169220.18	ENST00000511890.1	1536	11	449	-296	78	-2	3prime_fragment	FALSE	canonical	3	53	junction_3	30.0813711271426	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGAGTTGTCTTCCTTG	9506	False	NA	7	True	NA	NA	NA	177367391	177372594	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_177367558_177367713_177367826_177368156_177368267_177368716_177368921_177370587_177370665_177370904_177371032_177371164_177371247_177371349_177371397_177371474_177371590_177371872
H1_mix_00070611	chr5	+	1179	5	FSM	ENSG00000169220.18	ENST00000514102.5	875	5	0	-304	0	0	multi-exon	FALSE	canonical	3	91	junction_1	22.1528779168757	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTTGTCTTCCTTGTG	155	False	NA	9	True	NA	NA	NA	177370820	177372596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_177371032_177371164_177371247_177371349_177371397_177371474_177371590_177371872
H1_mix_00070625	chr5	+	1646	6	NIC	ENSG00000027847.14	novel	1698	6	NA	NA	3	-68	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	70.3289414110578	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCATGCCGGAATGTGGG	7	True	NA	-47	True	NA	NA	NA	177600164	177610198	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_177600261_177604065_177604542_177607301_177607528_177608538_177608623_177608909_177609015_177609539
H1_mix_00070626	chr5	+	2653	4	FSM	ENSG00000027847.14	ENST00000505145.1	2653	4	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_2	8.5764535535124	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTTAAGTGATATCTTC	1883	False	NA	21	True	AAGAAA	-12	NA	177605790	177610266	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_177607528_177608538_177608623_177608909_177609015_177609539
H1_mix_00070629	chr5	+	699	1	FSM	ENSG00000249129.1	ENST00000505831.1	966	1	242	25	242	-25	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCACCGGCGCTCAGCTG	NA	False	NA	NA	False	NA	NA	NA	177971557	177972256	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_177971600_177972300
H1_mix_00070632	chr5	+	2546	10	NIC	ENSG00000145916.19	novel	3911	11	NA	NA	-463	0	intron_retention	FALSE	canonical	3	318	junction_2	17.3809886206769	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATGTATTTACTGCCC	NA	False	NA	45	True	NA	NA	NA	178130532	178148540	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_178131377_178138107_178138259_178142582_178142729_178142851_178142993_178143626_178143728_178143941_178144109_178146113_178146280_178147532_178147636_178147728_178147884_178147968
H1_mix_00070633	chr5	+	759	5	FSM	ENSG00000145916.19	ENST00000512663.5	738	5	-21	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	135.216493076843	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGGAGCTGTGCCAGGTAC	NA	False	NA	NA	False	NA	NA	NA	178130995	178142976	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_178131055_178131236_178131377_178138107_178138397_178142582_178142729_178142851
H1_mix_00070634	chr5	+	822	5	FSM	ENSG00000145916.19	ENST00000507457.5	808	5	-14	0	0	0	multi-exon	FALSE	canonical	3	318	junction_2	17.6688284840846	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGGATTTCAAGCAGCC	-9	True	NA	NA	False	NA	NA	NA	178131010	178143644	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_178131377_178138107_178138259_178142582_178142729_178142851_178142993_178143626
H1_mix_00070635	chr5	+	3929	11	FSM	ENSG00000145916.19	ENST00000313386.9	3911	11	-18	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	69.2257899918809	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGAGTCTCACTTTGTTG	NA	False	NA	6	True	ATTAAA	-18	NA	178130995	178150568	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_178131055_178131236_178131377_178138107_178138259_178142582_178142729_178142851_178142993_178143626_178143728_178143941_178144109_178146113_178146280_178147532_178147636_178147728_178147884_178147968
H1_mix_00070637	chr5	+	4967	8	FSM	ENSG00000145916.19	ENST00000515360.5	2820	8	-52	-2095	-52	93	multi-exon	FALSE	canonical	3	327	junction_4	15.535344823193	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGCCACAGCGCCTGGG	NA	False	NA	99	True	NA	NA	NA	178141287	178150661	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_178142729_178142851_178142993_178143626_178143728_178143941_178144109_178146113_178146280_178147532_178147636_178147728_178147884_178147968
H1_mix_00070638	chr5	+	4250	6	FSM	ENSG00000145916.19	ENST00000513162.5	4250	6	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_2	16.9280831755991	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAAACTCAATCAGACTT	NA	False	NA	NA	False	TTTAAA	-24	NA	178141671	178149991	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_178142993_178143626_178144109_178146113_178146280_178147532_178147636_178147728_178147884_178147968
H1_mix_00070640	chr5	+	2425	6	FSM	ENSG00000197451.12	ENST00000506259.5	1674	6	-694	-57	-679	43	multi-exon	FALSE	canonical	3	933	junction_5	415.555243018302	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCGAGGGAGGCGGGGGG	NA	False	NA	64	True	NA	NA	NA	178203853	178211206	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_178205047_178205841_178206011_178206731_178206891_178207093_178207226_178209329_178209448_178210552
H1_mix_00070641	chr5	+	1608	7	FSM	ENSG00000197451.12	ENST00000355836.9	1602	7	-6	0	0	0	multi-exon	FALSE	canonical	3	933	junction_6	381.711678568466	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAATTTAAAAACCCCCA	1	True	NA	0	True	NA	NA	NA	178204532	178211142	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_178204741_178204814_178205047_178205841_178206011_178206731_178206891_178207093_178207226_178209329_178209448_178210552
H1_mix_00070642	chr5	+	1770	8	FSM	ENSG00000197451.12	ENST00000358344.8	1770	8	0	0	0	0	multi-exon	FALSE	canonical	3	1481	junction_6	199.950606145516	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGGTGAGTGTGGGATA	1	True	NA	21	True	AATAAA	-17	NA	178204532	178211163	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_178204741_178204814_178205047_178205841_178206011_178206731_178206891_178207093_178207226_178209329_178209448_178210131_178210273_178210552
H1_mix_00070643	chr5	+	1785	7	FSM	ENSG00000197451.12	ENST00000504898.5	1785	7	0	0	0	0	multi-exon	FALSE	canonical	3	1481	junction_5	200.757454545418	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAATTTAAAAACCCCCA	39	False	NA	0	True	NA	NA	NA	178204570	178211142	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_178205047_178205841_178206011_178206731_178206891_178207093_178207226_178209329_178209448_178210131_178210273_178210552
H1_mix_00070644	chr5	+	5146	6	NIC	ENSG00000178338.11	novel	2794	5	NA	NA	0	1351	intron_retention	FALSE	canonical	3	18	junction_5	15.0651916682132	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGGTCTTGTTCGTTCCCA	-13	True	NA	NA	False	AATAAA	-41	NA	178859952	178889473	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_178861081_178866243_178866371_178866975_178867072_178882708_178884519_178885613_178885734_178887608
H1_mix_00070645	chr5	+	3516	4	FSM	ENSG00000178338.11_ENSG00000206624.1	ENST00000520377.1	763	4	-728	-2025	6	0	multi-exon	FALSE	canonical	3	49	junction_3	1.4142135623731	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATATATATATATGCAG	-7	True	NA	NA	False	NA	NA	NA	178859958	178884879	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_178861081_178866243_178866371_178866975_178867072_178882708
H1_mix_00070647	chr5	+	3032	5	FSM	ENSG00000234284.7	ENST00000444149.7	3252	5	0	220	0	-220	multi-exon	FALSE	canonical	3	20	junction_1	5.11737237261468	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCACTTAAGGGCTGAAAC	-1	True	NA	NA	False	NA	NA	NA	179023803	179034844	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_179023905_179024969_179025038_179027472_179027600_179028031_179028128_179032204
H1_mix_00070652	chr5	+	2409	18	FSM	ENSG00000176783.15	ENST00000393438.6	2454	18	45	0	-4	0	multi-exon	TRUE	canonical	3	49	junction_1	62.3995386372794	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGTGCGTGCAGAAGCT	-36	True	NA	15	True	AATAAA	-16	NA	179559736	179610012	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_179559836_179560024_179560199_179562546_179562665_179567460_179567563_179569301_179569426_179577074_179577137_179580946_179581013_179585795_179585866_179589545_179589648_179591624_179591742_179593477_179593646_179594865_179594964_179596561_179596682_179598691_179598822_179601891_179601987_179605875_179605925_179607581_179607660_179609375
H1_mix_00070653	chr5	+	2583	17	FSM	ENSG00000176783.15	ENST00000437570.6	2642	17	59	0	10	0	multi-exon	FALSE	canonical	3	205	junction_5	37.402372919375	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGGTGCGTGCAGAAGC	-22	True	NA	14	True	AATAAA	-15	NA	179559750	179610011	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_179560199_179562546_179562665_179567460_179567563_179569301_179569426_179577074_179577137_179580946_179581013_179585795_179585866_179589545_179589648_179591624_179591742_179593477_179593646_179594865_179594964_179596561_179596682_179598691_179598822_179601891_179601987_179605875_179605925_179607581_179607660_179609375
H1_mix_00070654	chr5	+	3122	13	NIC	ENSG00000176783.15	novel	2642	17	NA	NA	2545	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	96.7342795152439	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACCTATCATTGGCCCTG	NA	False	NA	-27	True	NA	NA	NA	179579657	179609970	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_179581013_179585795_179585866_179586330_179586476_179589545_179589648_179591624_179591742_179593477_179593646_179594865_179594964_179596561_179596682_179598691_179598822_179601891_179601987_179605875_179605925_179607581_179607660_179609375
H1_mix_00070659	chr5	+	4217	15	FSM	ENSG00000127022.16	ENST00000452673.6	4207	15	-10	0	-10	0	multi-exon	FALSE	canonical	3	386	junction_1	900.528767571858	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTTGACTGAATTTCTT	496	False	NA	33	True	ATTAAA	-18	NA	179698895	179730925	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_179699050_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679_179726760_179728590
H1_mix_00070661	chr5	+	5120	14	FSM	ENSG00000127022.16	ENST00000680614.1	5103	14	-17	0	0	0	multi-exon	FALSE	canonical	3	3164	junction_13	280.020836080198	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAGTCCTGTTCAAATT	506	False	NA	-4	True	CATAAA	-10	NA	179698905	179729954	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_179699103_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679
H1_mix_00070662	chr5	+	4785	15	FSM	ENSG00000127022.16	ENST00000680894.1	4768	15	-17	0	0	0	multi-exon	FALSE	canonical	3	37	junction_13	987.40583637848	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTAAAATTTGTTTGAAT	506	False	NA	NA	False	AAGAAA	-13	NA	179698905	179731453	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_179699103_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726682_179726760_179728590
H1_mix_00070663	chr5	+	5525	14	FSM	ENSG00000127022.16	ENST00000679395.1	5525	14	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_1	931.147469237529	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCATGAGCCCTAGTAAAA	-57	True	NA	-4	True	AATAAA	-2	NA	179698922	179731620	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_179699050_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723780_179724656_179724784_179726679_179726760_179728590
H1_mix_00070664	chr5	+	5185	16	FSM	ENSG00000127022.16	ENST00000680984.1	5030	16	-136	-19	-107	0	multi-exon	FALSE	canonical	3	8	junction_7	1289.50638962701	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAGAGTAACGAATGTTTG	399	False	NA	17	True	AATAAA	-23	NA	179698798	179731641	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_179699103_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179715898_179716001_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679_179726760_179728590
H1_mix_00070665	chr5	+	4843	15	FSM	ENSG00000127022.16	ENST00000681476.1	4822	15	-21	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	972.922561782021	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGAGCCCTAGTAAAAAG	-57	True	NA	-2	True	AATAAA	-4	NA	179698922	179731622	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_179699006_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679_179726760_179728590
H1_mix_00070666	chr5	+	5167	16	FSM	ENSG00000127022.16	ENST00000680042.1	5143	16	-24	0	5	0	multi-exon	FALSE	canonical	2	4	junction_1	1268.83426113193	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGAGCCCTAGTAAAAAG	511	False	NA	-2	True	AATAAA	-4	NA	179698910	179731622	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_179699103_179704215_179704431_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679_179726760_179728590
H1_mix_00070667	chr5	+	5574	14	FSM	ENSG00000127022.16	ENST00000679719.1	5562	14	-12	0	5	0	multi-exon	FALSE	canonical	3	3164	junction_12	292.913097761498	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGAGCCCTAGTAAAAAG	511	False	NA	-2	True	AATAAA	-4	NA	179698910	179731622	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_179699103_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679_179726760_179728590
H1_mix_00070668	chr5	+	5340	16	FSM	ENSG00000127022.16	ENST00000513246.6	5162	16	-178	0	-107	0	multi-exon	FALSE	canonical	3	117	junction_2	1244.79430518549	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGAGCCCTAGTAAAAAG	399	False	NA	-2	True	AATAAA	-4	NA	179698798	179731622	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_179699103_179704154_179704431_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679_179726760_179728590
H1_mix_00070669	chr5	+	5279	16	FSM	ENSG00000127022.16	ENST00000681072.1	5103	16	-157	-19	-107	0	multi-exon	FALSE	canonical	3	52	junction_1	1253.88786668594	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAGAGTAACGAATGTTTG	399	False	NA	17	True	AATAAA	-23	NA	179698798	179731641	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_179699103_179699574_179699771_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679_179726760_179728590
H1_mix_00070670	chr5	+	4926	15	FSM	ENSG00000127022.16	ENST00000247461.9	4915	15	-11	0	0	0	multi-exon	FALSE	canonical	3	3164	junction_13	285.415388298443	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAGAGTAACGAATGTTTG	-24	True	NA	17	True	AATAAA	-23	NA	179698955	179731641	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_179699103_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679_179726760_179728590
H1_mix_00070672	chr5	+	5436	15	FSM	ENSG00000127022.16	ENST00000680013.1	5436	15	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	956.185910217233	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGAGCCCTAGTAAAAAG	43	False	NA	-2	True	AATAAA	-4	NA	179699094	179731622	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_179699771_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679_179726760_179728590
H1_mix_00070676	chr5	+	1930	9	NNC	ENSG00000161011.20	novel	2253	7	NA	NA	-241	0	at_least_one_novel_splicesite	TRUE	canonical	1	165	junction_1	165.464828211315	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACGTTTGCATAGAGAGAAA	62	False	NA	23	True	ATTAAA	-23	NA	179807082	179837255	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_179807124_179811573_179811683_179822957_179823054_179823857_179824088_179824181_179824324_179825145_179825227_179833031_179833247_179833586_179833783_179836435
H1_mix_00070677	chr5	+	2840	8	FSM	ENSG00000161011.20	ENST00000389805.9	2840	8	0	0	0	0	multi-exon	FALSE	canonical	1	172	junction_6	133.370437014309	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCTGCTAAATTGCATGA	0	True	NA	22	True	AATAAA	-22	NA	179820904	179838078	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_179821142_179822957_179823054_179823857_179824088_179824181_179824324_179825145_179825227_179833031_179833247_179833586_179833783_179836435
H1_mix_00070681	chr5	+	2181	10	NIC	ENSG00000113300.13	novel	6219	12	NA	NA	0	1956	intron_retention	TRUE	canonical	3	64	junction_5	54.4099664073085	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTTTCTTTCTTTTTGT	28	True	NA	NA	False	AATAAA	-21	NA	180494411	180569924	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_180494764_180529274_180529389_180549930_180550118_180553385_180553472_180564488_180564579_180564674_180564744_180565819_180565978_180567087_180567243_180567848_180568004_180569109
H1_mix_00070682	chr5	+	2198	10	ISM	ENSG00000113300.13	ENST00000261951.9	6219	12	33	8432	0	1958	5prime_fragment	FALSE	canonical	3	157	junction_5	29.8961164330382	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTCTTTCTTTTTGTGT	28	True	NA	NA	False	AATAAA	-23	NA	180494411	180569926	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_180494764_180529274_180529389_180549930_180550118_180553385_180553472_180564488_180564594_180564674_180564744_180565819_180565978_180567087_180567243_180567848_180568004_180569109
H1_mix_00070685	chr5	+	6250	13	FSM	ENSG00000113300.13	ENST00000618123.4	6250	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	81.7868163785175	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGCAAACATTGTGTTGG	61	False	NA	9	True	AATAAA	-14	NA	180494506	180578349	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_180494764_180495420_180495589_180529274_180529389_180549930_180550118_180553385_180553472_180564488_180564594_180564674_180564744_180565819_180565978_180567087_180567243_180567848_180568004_180569109_180569341_180571229_180571433_180573987
H1_mix_00070687	chr5	+	1809	2	FSM	ENSG00000245060.8	ENST00000501937.2	1809	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAATAAATGTTTTTGA	345	False	NA	-17	True	NA	NA	NA	180831364	180835678	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_180831807_180834311
H1_mix_00070691	chr5	+	3118	8	FSM	ENSG00000146063.20	ENST00000351937.9	2696	8	-424	2	367	0	multi-exon	FALSE	canonical	3	11	junction_6	4.22335585688414	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGAGGTCTGTTCCTTC	NA	False	NA	16	True	AATAAA	-17	NA	181222865	181235806	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_181224813_181230743_181230840_181232658_181232890_181233412_181233436_181233635_181233764_181234173_181234350_181234931_181234996_181235353
H1_mix_00070696	chr5	+	1167	2	FSM	ENSG00000248275.3	ENST00000657194.2	1170	2	0	3	0	-3	multi-exon	FALSE	canonical	3	167	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCTGCGTGTGATGGTGT	NA	False	NA	NA	False	AATAAA	-23	NA	181261168	181264578	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_181261385_181263627
H1_mix_00070697	chr5	+	687	3	FSM	ENSG00000248275.3	ENST00000507434.1	672	3	-15	0	2	0	multi-exon	FALSE	canonical	1	4	junction_1	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTCTGTCAGTAAATGT	9	True	NA	NA	False	AATAAA	-19	NA	181261206	181272307	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_181261385_181271572_181271690_181271915
H1_mix_00070700	chr5	-	9283	3	FSM	ENSG00000164366.4	ENST00000296824.4	9283	3	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	20.5	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTCTTACTTCTTTT	-4	True	NA	NA	False	NA	NA	NA	218153	196867	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_205959_216728_216860_218092
H1_mix_00070704	chr5	-	1448	1	FSM	ENSG00000221990.5	ENST00000623673.1	1663	1	51	164	51	-164	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCCCTGGAGTCCCAGC	-5	True	NA	NA	False	AATACA	-24	NA	443109	441661	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_441700_443100
H1_mix_00070705	chr5	-	5978	4	FSM	ENSG00000171368.12	ENST00000360578.7	5979	4	1	0	1	0	multi-exon	FALSE	canonical	1	2	junction_2	1.69967317119759	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCTGTTCCTCAGAGCA	-15	True	NA	1	True	AATAAA	-17	NA	693351	659861	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_665297_665969_666124_677749_678065_693277
H1_mix_00070706	chr5	-	229	2	FSM	ENSG00000249908.2	ENST00000506203.2	239	2	0	10	0	-10	multi-exon	FALSE	canonical	3	84	junction_1	0	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGTGTTGGCCCCGGGGA	8656	False	NA	NA	False	NA	NA	NA	768930	767391	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_767525_768834
H1_mix_00070707	chr5	-	1497	7	NIC	ENSG00000188818.13	novel	2606	13	NA	NA	4921	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_4	4.6696419087073	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGCTGTTTTTGTGTTTC	NA	False	NA	0	True	AATATA	-21	NA	837574	795604	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_796581_801099_801165_814760_814796_819524_819613_825163_825252_833772_833808_837364
H1_mix_00070708	chr5	-	467	2	FSM	ENSG00000188818.13	ENST00000505815.1	489	2	22	0	22	0	multi-exon	FALSE	canonical	2	2	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGAGCTGGCAGGCTCTG	6847	False	NA	NA	False	NA	NA	NA	843724	841577	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_841920_843599
H1_mix_00070709	chr5	-	3701	16	NNC	ENSG00000028310.18	novel	2843	16	NA	NA	0	1040	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	73.9567441143808	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAGCCAAATAAGCCTCG	-1	True	NA	NA	False	NA	NA	NA	892800	862700	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_864569_865413_865582_870472_870576_871525_871565_876100_876213_878354_878488_879793_879890_881106_881183_883937_884071_886591_886705_887360_887472_889020_889166_889586_889648_891154_891288_891639_891855_892605
H1_mix_00070711	chr5	-	2668	16	NNC	ENSG00000028310.18	novel	2665	16	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	65.1620202947153	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTACTGAGTGCCCATTT	1	True	NA	-20	True	CATAAA	-17	NA	892798	863740	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_864569_865413_865582_870472_870576_871525_871565_876100_876213_878354_878488_879793_879890_881106_881183_883937_884071_886591_886708_887360_887472_889020_889166_889586_889648_891148_891288_891639_891855_892605
H1_mix_00070712	chr5	-	2664	16	FSM	ENSG00000028310.18	ENST00000467963.6	2665	16	1	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	65.3531942601125	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTACTGAGTGCCCATTT	-1	True	NA	-20	True	CATAAA	-17	NA	892800	863740	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_864569_865413_865582_870472_870576_871525_871565_876100_876213_878354_878488_879793_879890_881106_881183_883937_884071_886591_886708_887360_887472_889020_889166_889586_889648_891154_891288_891639_891855_892605
H1_mix_00070713	chr5	-	2843	16	FSM	ENSG00000028310.18	ENST00000495265.5	2843	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	74.9647620923028	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTACTGAGTGCCCATTT	-1	True	NA	-20	True	CATAAA	-17	NA	892800	863740	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_864569_865413_865582_870472_870576_871525_871565_876100_876213_878354_878488_879793_879890_881106_881183_883937_884071_886591_886768_887360_887472_889020_889166_889586_889767_891154_891288_891639_891855_892605
H1_mix_00070715	chr5	-	5308	24	FSM	ENSG00000113504.21	ENST00000264930.10	5300	24	0	-8	0	8	multi-exon	TRUE	non_canonical	3	107	junction_17	17.7355068762861	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATCTCTTGAGTCTCAT	0	True	NA	-3	True	AATAAA	-25	NA	1112063	1050375	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_1052452_1053348_1053483_1057470_1057650_1060343_1060452_1063843_1063976_1064082_1064253_1065282_1065479_1073632_1073802_1074566_1074672_1075370_1075491_1076137_1076237_1076693_1076813_1077832_1078008_1078700_1078759_1079397_1079497_1081576_1081745_1083744_1083957_1085231_1085474_1086902_1087034_1088305_1088361_1088981_1089129_1093532_1093656_1094153_1094249_1111867
H1_mix_00070716	chr5	-	601	3	FSM	ENSG00000113504.21	ENST00000514994.1	586	3	0	-15	0	15	multi-exon	FALSE	canonical	3	124	junction_2	23	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCCTTCTAGTGCCAAGCG	9906	False	NA	NA	False	NA	NA	NA	1063882	1057195	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_1057650_1060343_1060452_1063843
H1_mix_00070718	chr5	-	4039	16	FSM	ENSG00000164362.21	ENST00000310581.10	4039	16	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_14	8.50098033562404	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATGTTTGAATCCTAAT	-11	True	NA	-17	True	AGTAAA	-37	NA	1295068	1253166	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_1253832_1254367_1254506_1255286_1255412_1258597_1258660_1260473_1260601_1264403_1264593_1266463_1266536_1268519_1268634_1271118_1271205_1272184_1272281_1278640_1278797_1279290_1279471_1280157_1280339_1282428_1282625_1293312_1294667_1294770
H1_mix_00070719	chr5	-	493	5	FSM	ENSG00000164362.21	ENST00000667927.1	493	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	18.8414436814168	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAGAGATGGAGCCACCC	NA	False	NA	NA	False	AAGAAA	-40	NA	1264534	1254616	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_1254665_1255286_1255412_1258597_1258660_1260473_1260601_1264403
H1_mix_00070720	chr5	-	2500	17	FSM	ENSG00000049656.14	ENST00000320895.10	2492	17	0	-8	0	8	multi-exon	FALSE	canonical	3	928	junction_14	76.2757128776913	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGAGTCATGAGTGTT	-5	True	NA	-8	True	ATTAAA	-28	NA	1345099	1317743	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_1318454_1320615_1320732_1321634_1321680_1321763_1321820_1322876_1322912_1323786_1323870_1324762_1324814_1325750_1325817_1330279_1330384_1331798_1331884_1334288_1334384_1335056_1335175_1337903_1337983_1338859_1339006_1341670_1341861_1344350_1344452_1344679
H1_mix_00070721	chr5	-	3540	8	FSM	ENSG00000049656.14	ENST00000503042.5	3540	8	0	0	0	0	multi-exon	FALSE	canonical	3	1065	junction_7	50.9108865307504	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTCTTGACCTGGTATA	9908	False	NA	-12	True	AATAAA	-17	NA	1331844	1317867	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_1318454_1320615_1320732_1321634_1321680_1321763_1321820_1322876_1322912_1323786_1323870_1324762_1325817_1330279
H1_mix_00070722	chr5	-	2032	16	FSM	ENSG00000049656.14	ENST00000630539.1	2032	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	282.621584455257	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAATTTTTCTGGCTG	207	False	NA	12	True	TTTAAA	-23	NA	1344887	1317891	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_1318454_1320615_1320732_1321634_1321680_1321763_1321820_1322876_1322912_1323786_1323870_1324762_1324814_1325750_1325817_1331802_1331884_1334288_1334384_1335056_1335175_1337903_1337983_1338859_1339006_1341670_1341861_1344350_1344452_1344679
H1_mix_00070724	chr5	-	3020	5	FSM	ENSG00000049656.14	ENST00000511268.6	704	5	0	-2316	0	0	multi-exon	FALSE	canonical	3	1098	junction_2	53.2511736959853	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAATTTTTCTGGCTG	2486	False	NA	12	True	TTTAAA	-23	NA	1323830	1317891	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_1320732_1321634_1321680_1321763_1321820_1322876_1322912_1323786
H1_mix_00070726	chr5	-	3948	14	FSM	ENSG00000153395.10	ENST00000283415.4	3945	14	0	-3	0	3	multi-exon	FALSE	canonical	3	741	junction_2	75.8339824841626	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTTTGTGTGGTTCTT	-14	True	NA	-1	True	AGTAAA	-26	NA	1523960	1461423	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_1463836_1466748_1466891_1470825_1470925_1473956_1474111_1474559_1474686_1477403_1477487_1479620_1479676_1480941_1480977_1483427_1483487_1488390_1488452_1489745_1489859_1494699_1494915_1501460_1501604_1523709
H1_mix_00070727	chr5	-	2825	1	Genic_Genomic	ENSG00000185986.13	novel	NA	NA	NA	NA	22978	8	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTATACTTTGTCTCTGTG	1479	False	NA	-7	True	NA	NA	NA	1570311	1567486	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr5_-_1567500_1570300
H1_mix_00070728	chr5	-	1316	8	FSM	ENSG00000185986.13	ENST00000689786.1	1332	8	11	5	-2	-5	multi-exon	FALSE	canonical	3	16	junction_4	23.0279333481256	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACTTTCTTTTATTTCCA	-11	True	NA	NA	False	AATAAA	-12	NA	1594490	1571960	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_1572287_1574181_1574296_1576178_1576310_1579276_1579485_1584983_1585134_1589246_1589366_1593112_1593285_1594394
H1_mix_00070729	chr5	-	1548	7	NIC	ENSG00000185986.13	novel	1332	8	NA	NA	-279	-5	combination_of_known_splicesites	TRUE	canonical	3	23	junction_3	19.6694913225759	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACTTTCTTTTATTTCCA	NA	False	NA	NA	False	AATAAA	-12	NA	1594930	1571960	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_1572287_1574181_1574296_1576178_1576310_1584983_1585134_1589246_1589366_1593112_1593285_1594394
H1_mix_00070730	chr5	-	2861	6	NIC	ENSG00000185986.13	novel	1332	8	NA	NA	3	-130	intron_retention	FALSE	canonical	3	23	junction_2	21.2978872191586	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACCCAGGCTGGGAGCTT	6	True	NA	NA	False	NA	NA	NA	1594473	1572085	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_1574296_1576178_1576310_1584983_1585134_1589246_1589366_1593112_1593285_1594394
H1_mix_00070731	chr5	-	3884	6	NNC	ENSG00000185986.13	novel	736	3	NA	NA	-279	-2705	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	32.2279381903342	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGTGTGTGTCTTTA	NA	False	NA	0	True	NA	NA	NA	1594930	1577933	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_1578422_1579276_1581696_1584983_1585134_1589246_1589366_1593112_1593285_1594394
H1_mix_00070732	chr5	-	1033	5	FSM	ENSG00000188002.11	ENST00000507290.5	1033	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	49.9168057872296	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTTTTCTTTTTTTTTTT	-17	True	NA	2	True	ATTAAA	-20	NA	1633981	1598919	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_1599270_1599626_1599828_1602690_1602736_1632643_1632907_1633807
H1_mix_00070733	chr5	-	2317	7	FSM	ENSG00000188002.11	ENST00000507841.5	2338	7	21	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	46.721693747837	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTTTTCTTTTTTTTTTT	-20	True	NA	2	True	ATTAAA	-20	NA	1633984	1598919	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_1599828_1602690_1602736_1626785_1626927_1628754_1629631_1632643_1632752_1632844_1632907_1633807
H1_mix_00070734	chr5	-	781	5	FSM	ENSG00000188002.11	ENST00000692393.1	835	5	37	17	0	-17	multi-exon	FALSE	canonical	3	39	junction_1	39.8395218344799	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGGTTTTCCAAAACTG	17	True	NA	-15	True	ATTAAA	-3	NA	1633947	1598936	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_1599270_1599626_1599828_1602690_1602736_1632844_1632907_1633807
H1_mix_00070735	chr5	-	1009	4	FSM	ENSG00000188002.11	ENST00000507505.5	1009	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	39.9360600070774	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACAAAACTCACTCCTC	3	True	NA	NA	False	NA	NA	NA	1634002	1599120	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_1599828_1602690_1602736_1632844_1632907_1633807
H1_mix_00070736	chr5	-	1556	3	FSM	ENSG00000188002.11	ENST00000690916.1	1584	3	25	3	0	1	multi-exon	FALSE	canonical	3	28	junction_1	56.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTTTGTTTGTTTG	-20	True	NA	-4	True	TTTAAA	-42	NA	1633984	1628514	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_1629631_1632643_1632907_1633807
H1_mix_00070737	chr5	-	611	2	FSM	ENSG00000171421.13	ENST00000505059.7	609	2	0	-2	0	2	multi-exon	FALSE	canonical	3	556	junction_1	0	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTCATTCATTCTCTCT	-5	True	NA	-7	True	ATTAAA	-19	NA	1799837	1798382	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_1798948_1799791
H1_mix_00070738	chr5	-	2216	5	FSM	ENSG00000113430.10	ENST00000231357.7	2394	5	178	0	-3	0	multi-exon	FALSE	canonical	2	4	junction_4	1.4790199457749	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAACACATTTAAAACCAGG	4386	False	NA	14	True	AATAAA	-29	NA	1882747	1877412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_1878793_1879503_1879833_1880724_1880835_1881807_1882060_1882602
H1_mix_00070739	chr5	-	2639	5	FSM	ENSG00000170561.13	ENST00000382611.10	2630	5	0	-9	0	9	multi-exon	FALSE	canonical	3	67	junction_1	44.1665880502445	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATTTCTGATGCTGGC	-3	True	NA	0	True	AATAAA	-26	NA	2751662	2745835	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_2746787_2747540_2747617_2748344_2749053_2749381_2749788_2751164
H1_mix_00070740	chr5	-	2240	5	NNC	ENSG00000170561.13	novel	2630	5	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	64.3467170879758	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGTTTGGGGCTTATT	-1	True	NA	77	True	AATAAA	-21	NA	2751660	2746164	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_2746719_2747540_2747617_2748344_2749053_2749381_2749788_2751164
H1_mix_00070741	chr5	-	3079	4	FSM	ENSG00000170561.13	ENST00000302057.6	3079	4	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_3	24.9131825880731	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGTTTGGGGCTTATT	5	True	NA	77	True	AATAAA	-21	NA	2751677	2746164	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_2747617_2748344_2749053_2749381_2749788_2751164
H1_mix_00070742	chr5	-	1650	4	FSM	ENSG00000250579.3	ENST00000512155.3	1684	4	34	0	34	0	multi-exon	TRUE	canonical	3	27	junction_3	18.006171781426	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTCTTCTAATTTAAAA	-16	False	NA	-22	True	AATAAA	-21	NA	5140119	5132083	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_5133233_5133636_5133771_5133867_5134071_5139955
H1_mix_00070743	chr5	-	7605	3	FSM	ENSG00000250579.3	ENST00000654665.1	5854	3	-1734	-17	-36	0	multi-exon	FALSE	canonical	3	57	junction_1	6.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTCTTCTAATTTAAAA	NA	False	NA	-22	True	AATAAA	-21	NA	5140189	5132083	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_5133233_5133636_5133771_5133867
H1_mix_00070744	chr5	-	1723	3	FSM	ENSG00000286753.2	ENST00000669435.1	1912	3	110	79	110	-68	multi-exon	FALSE	canonical	1	1	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACATGAACTGAGAAGTG	126	False	NA	-72	True	AAGAAA	-10	NA	5422006	5390174	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_5391204_5420750_5420841_5421402
H1_mix_00070745	chr5	-	1087	4	FSM	ENSG00000133398.4	ENST00000255764.4	1101	4	0	14	0	-14	multi-exon	FALSE	canonical	3	437	junction_3	33.6386021641143	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTAAACAGTTAATTATTA	-6	True	NA	30	True	AATATA	-13	NA	6378547	6371887	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_6372602_6374323_6374427_6377165_6377250_6378361
H1_mix_00070747	chr5	-	3061	19	FSM	ENSG00000037474.15	ENST00000264670.11	3056	19	0	-5	0	5	multi-exon	FALSE	canonical	3	628	junction_5	61.6397588942657	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGATTCCTGTTTTTGCT	2	True	NA	NA	False	AATAAA	-20	NA	6633044	6599233	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_6600233_6602460_6602501_6604137_6604277_6604604_6604686_6605272_6605409_6606819_6606913_6607199_6607385_6609825_6609923_6610954_6611086_6611724_6611799_6616726_6616858_6617949_6618025_6620105_6620299_6622015_6622101_6623213_6623286_6625563_6625670_6631872_6631978_6632598_6632757_6632883
H1_mix_00070748	chr5	-	1290	4	FSM	ENSG00000037474.15	ENST00000513888.5	1290	4	0	0	0	0	multi-exon	FALSE	canonical	3	713	junction_1	42.1610668218388	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGTAAAATAAACTCTCCC	NA	False	NA	-40	True	NA	NA	NA	6604882	6599399	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_6600233_6602460_6602501_6604137_6604277_6604604
H1_mix_00070749	chr5	-	2619	18	FSM	ENSG00000037474.15	ENST00000506139.5	2619	18	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_16	172.021624938165	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTGCAGTATTTTTTAAA	4	True	NA	NA	False	NA	NA	NA	6633042	6599568	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_6600233_6602460_6602501_6604137_6604277_6604604_6604686_6605272_6605409_6606819_6606913_6607199_6607385_6609825_6609923_6610954_6611086_6611724_6611799_6616726_6616858_6617949_6618025_6620105_6620299_6622015_6622101_6623213_6623286_6625563_6625670_6632598_6632757_6632883
H1_mix_00070751	chr5	-	1987	3	FSM	ENSG00000215217.7	ENST00000399810.7	2028	3	0	41	0	-41	multi-exon	FALSE	canonical	3	17	junction_2	1	4744	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATCTGTAAGTGACTGTA	-22	True	NA	NA	False	TATAAA	-37	NA	7851133	7830418	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_7832030_7835381_7835499_7850874
H1_mix_00070752	chr5	-	2321	7	NIC	ENSG00000124279.12	novel	2431	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	18	junction_6	29.2617497767991	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCATAGTTATCTGCT	17	True	NA	-13	True	AATAAA	-16	NA	7869010	7859158	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_7859540_7861148_7861264_7861582_7861653_7862822_7862998_7865897_7865984_7866645_7868108_7868978
H1_mix_00070753	chr5	-	2431	7	FSM	ENSG00000124279.12	ENST00000264669.10	2431	7	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_6	19.4028921097403	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCATAGTTATCTGCT	-4	True	NA	-13	True	AATAAA	-16	NA	7869031	7859158	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_7859540_7861148_7861264_7861582_7861653_7862822_7862998_7865897_7865984_7866645_7868197_7868978
H1_mix_00070754	chr5	-	819	6	FSM	ENSG00000124279.12	ENST00000513658.5	819	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	43.6091733469003	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTAGACTGGTGATCTGA	1	True	NA	NA	False	ATTAAA	-39	NA	7869026	7859335	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_7859540_7861148_7861264_7861582_7861774_7862822_7862998_7865897_7865984_7868978
H1_mix_00070755	chr5	-	11768	23	FSM	ENSG00000112902.12	ENST00000382496.10	11755	23	0	-13	0	13	multi-exon	FALSE	canonical	3	18	junction_1	5.69833961607812	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTTTGTATTGCCTCT	0	True	NA	10	True	AATAAA	-31	NA	9546075	9035019	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_9043017_9044372_9044585_9050409_9050458_9051872_9052029_9054086_9054258_9062886_9063106_9066420_9066647_9108139_9108288_9118997_9119142_9122655_9122838_9136503_9136622_9154487_9154696_9190266_9190472_9197167_9197304_9201954_9202241_9224673_9224888_9226868_9226968_9237827_9237891_9318371_9318418_9337712_9337813_9379822_9380024_9437755_9437853_9545583
H1_mix_00070756	chr5	-	2743	5	FSM	ENSG00000150756.14	ENST00000511437.6	2651	5	0	-92	0	92	multi-exon	FALSE	canonical	3	25	junction_2	13.9642400437689	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAACTTTGGAACTGGAT	3	True	NA	89	True	AGTAAA	-36	NA	10249888	10225414	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_10227648_10235210_10235262_10236477_10236616_10239066_10239357_10249857
H1_mix_00070757	chr5	-	406	1	FSM	ENSG00000271715.1	ENST00000607847.1	430	1	-9	33	-9	-33	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAACTATATAAAGTTAA	NA	False	NA	NA	False	GATAAA	-41	NA	10269927	10269521	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_10269500_10269900
H1_mix_00070758	chr5	-	3893	6	FSM	ENSG00000164237.9	ENST00000296658.4	3893	6	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_2	19.9659710507654	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAAGTGAAATTAATTTTA	-29	True	NA	NA	False	ATTAAA	-14	NA	10307902	10277594	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_10280633_10282196_10282289_10286353_10286497_10288421_10288530_10290547_10290782_10307624
H1_mix_00070759	chr5	-	2652	4	FSM	ENSG00000164237.9	ENST00000511963.5	796	4	-299	-1557	0	1557	multi-exon	FALSE	canonical	1	3	junction_3	62.6968012652072	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATTGAATTCTGTACTG	-29	True	NA	-8	True	AATAAA	-20	NA	10307902	10284574	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_10286497_10288421_10288530_10290547_10290782_10307514
H1_mix_00070760	chr5	-	922	1	FSM	ENSG00000259802.1	ENST00000561606.1	901	1	-23	2	-23	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGCGCTTGACTAATGT	-11	True	NA	-1	True	AATAAA	-27	NA	10353624	10352702	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_10352700_10353600
H1_mix_00070761	chr5	-	2363	4	FSM	ENSG00000112977.16	ENST00000230895.11	2301	4	-59	-3	-59	3	multi-exon	FALSE	canonical	3	521	junction_1	25.4863798048204	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTTTCTTATAGATCA	-92	True	NA	1	True	AATAAA	-23	NA	10761293	10679226	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_10681170_10683528_10683572_10748174_10748272_10761013
H1_mix_00070763	chr5	-	5884	22	FSM	ENSG00000169862.20	ENST00000304623.13	5888	22	0	4	0	-4	multi-exon	FALSE	canonical	3	21	junction_16	8.76293989744643	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTGGCTGCCATCGTCC	-6	True	NA	NA	False	AATAAA	-17	NA	11904446	10971839	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_10973714_10981772_10981847_10988110_10988243_10992550_10992678_11017973_11018059_11022768_11022980_11082695_11082847_11098574_11098749_11110857_11111044_11117449_11117568_11159575_11159760_11199447_11199662_11236690_11236824_11346371_11346628_11364695_11364891_11384664_11385230_11397030_11397204_11411535_11411653_11412034_11412070_11564943_11565057_11732135_11732273_11903816
H1_mix_00070764	chr5	-	5676	3	Antisense	novelGene_ENSG00000248131.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	167	junction_2	33.5	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTCAAAAATATCTGTTTA	4	False	NA	NA	False	NA	NA	NA	12668006	12655690	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr5_-_12660808_12665722_12666011_12667735
H1_mix_00070765	chr5	-	5462	4	Antisense	novelGene_ENSG00000248131.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	100.615881229335	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTCAAAAATATCTGTTTA	4	False	NA	NA	False	NA	NA	NA	12668006	12655690	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr5_-_12656089_12656116_12660808_12665722_12665825_12667735
H1_mix_00070766	chr5	-	919	2	Antisense	novelGene_ENSG00000248131.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	1181	junction_1	0	224	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGGAACAGAGTGTGGCC	8	False	NA	-36	True	AATAAA	-18	NA	12668002	12660155	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr5_-_12660808_12667735
H1_mix_00070767	chr5	-	1762	1	FSM	ENSG00000250182.3	ENST00000503537.1	1389	1	-62	-311	-62	311	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATGATGTAAAATTATAG	-1	True	NA	NA	False	ATTAAA	-30	NA	14653391	14651629	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_14651600_14653400
H1_mix_00070768	chr5	-	8200	12	FSM	ENSG00000154122.14	ENST00000284268.8	8207	12	0	7	0	-7	multi-exon	FALSE	canonical	3	41	junction_10	3.14655787270487	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTGAGATTGCTTTTAGT	4	True	NA	NA	False	AGTAAA	-19	NA	14871778	14704806	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_14711311_14712873_14712974_14713543_14713668_14716705_14716836_14741826_14741923_14745869_14745963_14749171_14749307_14751068_14751240_14755860_14755945_14758479_14758599_14768974_14769192_14871351
H1_mix_00070770	chr5	-	1276	1	FSM	ENSG00000249485.1	ENST00000502424.1	1276	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGTCTTTACTTCTTG	32	False	NA	NA	False	NA	NA	NA	14798400	14797124	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_14797100_14798400
H1_mix_00070771	chr5	-	1756	4	FSM	ENSG00000183654.9	ENST00000332432.9	1757	4	0	1	0	-1	multi-exon	FALSE	canonical	3	13	junction_2	6.12825877028341	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCTCTGTGTGTAATTTTT	0	True	NA	-2	True	AATATA	-16	NA	16179791	16067139	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_16067794_16090888_16091082_16177725_16177882_16179038
H1_mix_00070772	chr5	-	3616	6	FSM	ENSG00000173545.5	ENST00000308683.3	1707	6	0	-1909	0	1909	multi-exon	FALSE	canonical	3	272	junction_5	30.0798936168332	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTCTGGAGTAGAATTC	0	True	NA	NA	False	TATAAA	-14	NA	16465800	16449609	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_16451785_16453012_16453157_16458516_16458630_16463107_16463271_16463481_16463743_16465040
H1_mix_00070773	chr5	-	3208	9	FSM	ENSG00000154153.15	ENST00000306320.10	3208	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	2.54950975679639	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCGTTATCAGTATTTTT	2	True	NA	-15	True	TATAAA	-2	NA	16616997	16473052	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_16475235_16477661_16477789_16478033_16478099_16478849_16478988_16481008_16481094_16483345_16483473_16565762_16565794_16571995_16572103_16616651
H1_mix_00070774	chr5	-	7470	24	NNC	ENSG00000145555.15	novel	4839	23	NA	NA	-101	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	141.610531151752	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGTATTTGTGGATG	6268	False	NA	0	True	AATAAA	-17	NA	16738515	16661906	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_16663359_16665301_16666794_16668276_16668469_16670525_16670979_16671421_16671543_16672688_16672826_16673681_16673890_16674852_16675151_16676030_16676155_16679946_16680105_16681308_16681504_16681870_16682014_16683879_16683936_16685737_16685832_16689823_16689920_16694370_16694615_16699449_16699574_16700962_16701839_16702542_16702589_16702924_16703159_16704578_16704686_16710907_16711023_16711120_16711246_16738135
H1_mix_00070776	chr5	-	11442	41	FSM	ENSG00000145555.15	ENST00000513610.6	11442	41	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	181.48490123148	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGTATTTGTGGATG	-18	True	NA	0	True	AATAAA	-17	NA	16936288	16661906	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_16666794_16668276_16668469_16670525_16670979_16671421_16671543_16672688_16672826_16673681_16673890_16674852_16675151_16676030_16676155_16679946_16680105_16681308_16681504_16681870_16682014_16683879_16683936_16685737_16685832_16689823_16689920_16694370_16694615_16699449_16699574_16700962_16701839_16702542_16702589_16702924_16703159_16704578_16704686_16710907_16711023_16711120_16711246_16754827_16754909_16758117_16758227_16761463_16761547_16762044_16762114_16762544_16762638_16763480_16763548_16763654_16763756_16764249_16764397_16766079_16766199_16769073_16769204_16779544_16779649_16780523_16780609_16780727_16780742_16781704_16781830_16783334_16783470_16794645_16794834_16818008_16818168_16877608_16877708_16935787
H1_mix_00070777	chr5	-	4803	23	FSM	ENSG00000145555.15	ENST00000505695.5	4803	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	123.629043900969	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGGTGTCTCCGAGGATC	0	True	NA	NA	False	AAAACA	-42	NA	16742228	16666561	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_16666794_16668276_16668469_16670525_16670979_16671421_16671543_16672688_16672826_16673681_16673890_16674852_16675151_16676030_16676155_16679946_16680105_16681308_16681504_16681870_16682014_16683879_16683936_16685737_16685832_16689823_16689920_16694370_16694615_16699449_16699574_16700962_16701839_16702542_16702589_16702924_16703159_16704578_16704686_16710907_16711023_16711120_16711246_16741803
H1_mix_00070778	chr5	-	2750	23	FSM	ENSG00000145555.15	ENST00000513882.5	2910	23	160	0	160	0	multi-exon	FALSE	canonical	0	0	junction_3	98.2485463480459	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAGAAACAGGAAGAG	156	False	NA	9	True	NA	NA	NA	16916367	16702976	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_16703159_16704578_16704686_16710907_16711023_16711120_16711246_16754827_16754909_16758117_16758227_16761463_16761547_16762044_16762114_16762544_16762638_16763480_16763548_16763654_16763756_16764249_16764397_16766079_16766199_16769073_16769204_16779544_16779649_16780523_16780609_16780727_16780742_16781704_16781830_16783334_16783470_16794645_16794834_16818008_16818168_16877608_16877708_16916054
H1_mix_00070779	chr5	-	487	1	FSM	ENSG00000243538.1	ENST00000470806.1	348	1	-72	-67	-72	67	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAATTAGCC	NA	False	NA	NA	False	AATAAA	-16	NA	16902713	16902226	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_16902200_16902700
H1_mix_00070780	chr5	-	1663	3	FSM	ENSG00000215196.5	ENST00000665653.1	542	3	-1182	61	-368	-61	multi-exon	FALSE	canonical	0	0	junction_2	1	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTATTCAAAATGGCTTT	1813	False	NA	NA	False	NA	NA	NA	17217415	17144922	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_17145150_17162468_17162566_17216076
H1_mix_00070781	chr5	-	919	1	FSM	ENSG00000223361.5	ENST00000401830.3	930	1	6	5	6	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGTGAAGAGATAGGAG	12	False	NA	NA	False	CATAAA	-27	NA	17354618	17353699	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_17353700_17354600
H1_mix_00070782	chr5	-	430	2	Intergenic	novelGene_1142	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	359	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCTCAGGGCTGCTTCA	NA	False	NA	NA	False	NA	NA	NA	18543901	18538869	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_-_18539004_18543605
H1_mix_00070783	chr5	-	1343	5	Intergenic	novelGene_1144	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	132.085199776508	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACATTGGCATAAAAGTTT	16	False	NA	NA	False	AGTAAA	-14	NA	18674239	18615213	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_-_18615996_18658426_18658540_18664323_18664435_18672041_18672144_18674004
H1_mix_00070784	chr5	-	14335	2	Intergenic	novelGene_1146	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	329	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATATATATATATATAATA	8594	False	NA	NA	False	NA	NA	NA	18665661	18645542	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_-_18658540_18664323
H1_mix_00070785	chr5	-	2213	4	Intergenic	novelGene_1147	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	28	junction_1	133.102299838215	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAGGTAATGGCTATAGC	9	False	NA	NA	False	AAAACA	-9	NA	18674246	18652316	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_-_18654064_18658426_18658540_18664323_18664435_18674004
H1_mix_00070786	chr5	-	5385	4	Intergenic	novelGene_1150	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_3	140.504646028363	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAACTGGGCATAACTCA	24	False	NA	NA	False	NA	NA	NA	18674231	18653594	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_-_18658540_18664323_18664435_18672041_18672144_18674004
H1_mix_00070790	chr5	-	23941	3	NNC	ENSG00000248605.5	novel	638	3	NA	NA	2083	3470	at_least_one_novel_splicesite	FALSE	canonical	3	103	junction_2	12	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTTTTGAGAAGTGTCT	807	False	NA	NA	False	CATAAA	-3	NA	25443824	25409968	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_25413845_25422729_25434212_25435241
H1_mix_00070791	chr5	-	3668	4	NNC	ENSG00000248605.5	novel	638	3	NA	NA	70	2892	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	58.5054603339628	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACTGTTTAAATACATCTT	NA	False	NA	NA	False	TATAAA	-28	NA	25445837	25410546	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_25413845_25415574_25415801_25422729_25422856_25445819
H1_mix_00070794	chr5	-	8888	2	NNC	ENSG00000248605.5	novel	638	3	NA	NA	0	-9766	at_least_one_novel_splicesite	FALSE	canonical	3	231	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAAGCTTTCTTTGTCTAT	NA	False	NA	-5	True	AATAAA	-23	NA	25445907	25425411	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_25434212_25445819
H1_mix_00070795	chr5	-	3078	12	FSM	ENSG00000113100.10	ENST00000231021.9	3082	12	0	4	0	-4	multi-exon	FALSE	canonical	1	3	junction_1	2.04898684901539	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATTTCATTTTATTTAAT	-2	True	NA	NA	False	AATAAA	-16	NA	27038586	26880600	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_26881624_26885613_26885866_26885965_26886084_26889835_26889958_26890427_26890565_26902475_26902730_26903636_26903825_26905958_26906127_26906718_26906839_26915629_26915925_26988105_26988383_27038462
H1_mix_00070796	chr5	-	1624	6	FSM	ENSG00000113100.10	ENST00000505045.1	1801	6	0	177	0	-177	multi-exon	FALSE	canonical	2	5	junction_2	2.0591260281974	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATATTATCATTTCATAT	-2	True	NA	NA	False	AATAGA	-3	NA	27038586	26903184	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_26903825_26905958_26906127_26906718_26906839_26915629_26915925_26988105_26988383_27038462
H1_mix_00070797	chr5	-	5506	35	FSM	ENSG00000113360.17	ENST00000511367.6	5305	35	0	-201	0	198	multi-exon	FALSE	canonical	3	160	junction_34	66.6489343487725	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCAATGAGGTGTTTGA	22	True	NA	NA	False	AATAAA	-20	NA	31532061	31400295	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_31401563_31405676_31405724_31406852_31406946_31409055_31409160_31409249_31409333_31410745_31410888_31421271_31421378_31422786_31422945_31424426_31424472_31429474_31429546_31431575_31431679_31435764_31435865_31437238_31437299_31448546_31448608_31449280_31449420_31451532_31451641_31464235_31464344_31466181_31466282_31467938_31468064_31472062_31472233_31483553_31483629_31484880_31484963_31486490_31486563_31493206_31493294_31495285_31495373_31504554_31504636_31508620_31508776_31511034_31511177_31514987_31515220_31515453_31515565_31521122_31521216_31526078_31526913_31529039_31529106_31530797_31530925_31531989
H1_mix_00070798	chr5	-	5291	35	NIC	ENSG00000113360.17	novel	5416	36	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_30	80.753442726058	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTCATTCATCATTTC	22	True	NA	NA	False	AATAAA	-25	NA	31532061	31400493	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_31401563_31405676_31405724_31406852_31406946_31409055_31409160_31409249_31409333_31410745_31410888_31421271_31421378_31422786_31422945_31424426_31424472_31429474_31429546_31431575_31431679_31435764_31435865_31437238_31437299_31448546_31448608_31449280_31449420_31451532_31451641_31464235_31464344_31466181_31466282_31467938_31468064_31472062_31472233_31483553_31483629_31484880_31484963_31486490_31486563_31493206_31493294_31495285_31495373_31504554_31504636_31508620_31508776_31511034_31511177_31514987_31515220_31515453_31515565_31526078_31526913_31529039_31529106_31530797_31530925_31531449_31531526_31531989
H1_mix_00070799	chr5	-	5416	36	FSM	ENSG00000113360.17	ENST00000344624.8	5416	36	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_30	68.6537363164168	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTCATTCATCATTTC	-10	True	NA	NA	False	AATAAA	-25	NA	31532093	31400493	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_31401563_31405676_31405724_31406852_31406946_31409055_31409160_31409249_31409333_31410745_31410888_31421271_31421378_31422786_31422945_31424426_31424472_31429474_31429546_31431575_31431679_31435764_31435865_31437238_31437299_31448546_31448608_31449280_31449420_31451532_31451641_31464235_31464344_31466181_31466282_31467938_31468064_31472062_31472233_31483553_31483629_31484880_31484963_31486490_31486563_31493206_31493294_31495285_31495373_31504554_31504636_31508620_31508776_31511034_31511177_31514987_31515220_31515453_31515565_31521122_31521216_31526078_31526913_31529039_31529106_31530797_31530925_31531449_31531526_31531989
H1_mix_00070801	chr5	-	4681	35	FSM	ENSG00000113360.17	ENST00000513349.5	4681	35	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_29	73.0224701161808	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTTTCCATCTGTGTCC	-26	True	NA	NA	False	AATAAA	-33	NA	31532109	31401133	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_31401563_31405676_31405724_31406852_31406946_31409055_31409160_31409249_31409333_31410745_31410888_31421271_31421378_31422786_31422945_31424426_31424472_31429474_31429546_31431575_31431679_31435764_31435865_31437238_31437299_31448546_31448608_31449280_31449420_31451532_31451641_31464235_31464344_31466181_31466282_31467938_31468064_31472062_31472233_31483553_31483629_31484880_31484963_31486490_31486563_31493206_31493294_31495285_31495373_31504554_31504636_31508620_31508776_31511034_31511177_31514987_31515220_31521122_31521216_31526078_31526913_31529039_31529106_31530797_31530925_31531449_31531526_31531989
H1_mix_00070802	chr5	-	4627	35	NNC	ENSG00000113360.17	novel	5305	35	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	3	117	junction_18	76.3642473275039	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTGGAATAGATCCTG	22	True	NA	NA	False	AATAAA	-16	NA	31532061	31401150	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_31401563_31405676_31405724_31406852_31406946_31409055_31409160_31409249_31409333_31410745_31410888_31421271_31421378_31422786_31422945_31424426_31424472_31429474_31429546_31431575_31431679_31435764_31435865_31437238_31437299_31448546_31448608_31449280_31449420_31451532_31451641_31464235_31464344_31466181_31466282_31467962_31468064_31472062_31472233_31483553_31483629_31484880_31484963_31486490_31486563_31493206_31493294_31495285_31495373_31504554_31504636_31508620_31508776_31511034_31511177_31514987_31515220_31515453_31515565_31521122_31521216_31526078_31526913_31529039_31529106_31530797_31530925_31531989
H1_mix_00070803	chr5	-	4700	36	NNC	ENSG00000113360.17	novel	5416	36	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_31	94.0161514565124	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTATGTGGAATAGATCCT	22	True	NA	NA	False	AATAAA	-15	NA	31532061	31401151	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_31401563_31405676_31405724_31406852_31406946_31409055_31409160_31409249_31409333_31410745_31410888_31421271_31421378_31422786_31422945_31424426_31424472_31429474_31429546_31431575_31431679_31435764_31435865_31437238_31437299_31448546_31448608_31449280_31449420_31451532_31451641_31464235_31464344_31466181_31466282_31467962_31468064_31472062_31472233_31483553_31483629_31484880_31484963_31486490_31486563_31493206_31493294_31495285_31495373_31504554_31504636_31508620_31508776_31511034_31511177_31514987_31515220_31515453_31515565_31521122_31521214_31526078_31526913_31529039_31529106_31530797_31530925_31531449_31531526_31531989
H1_mix_00070804	chr5	-	4588	35	NNC	ENSG00000113360.17	novel	4681	35	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_28	98.5356846115584	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTATGTGGAATAGATCCT	22	True	NA	NA	False	AATAAA	-15	NA	31532061	31401151	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_31401563_31405676_31405724_31406852_31406946_31409055_31409160_31409249_31409333_31410745_31410888_31421271_31421378_31422786_31422945_31424426_31424472_31429474_31429546_31431575_31431679_31435764_31435865_31437238_31437299_31448546_31448608_31449280_31449420_31451532_31451641_31464235_31464344_31466181_31466282_31467962_31468064_31472062_31472233_31483553_31483629_31484880_31484963_31486490_31486563_31493206_31493294_31495285_31495373_31504554_31504636_31508620_31508776_31511034_31511177_31514990_31515220_31521122_31521216_31526078_31526913_31529039_31529106_31530797_31530925_31531449_31531526_31531989
H1_mix_00070805	chr5	-	4533	34	NNC	ENSG00000113360.17	novel	5305	35	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_30	87.8652340644947	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTATGTGGAATAGATCCT	22	True	NA	NA	False	AATAAA	-15	NA	31532061	31401151	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_31401563_31405676_31405724_31406852_31406946_31409055_31409160_31409249_31409333_31410745_31410888_31421271_31421378_31422786_31422945_31424426_31424472_31429474_31429546_31431575_31431679_31435764_31435865_31437238_31437299_31448546_31448608_31449280_31449420_31451532_31451641_31464235_31464344_31466181_31466282_31467962_31468064_31472062_31472233_31483553_31483629_31484880_31484963_31486490_31486563_31493206_31493294_31495285_31495373_31504554_31504636_31508620_31508776_31511034_31511177_31514987_31515220_31515453_31515565_31526078_31526913_31529039_31529106_31530797_31530925_31531989
H1_mix_00070809	chr5	-	2678	4	FSM	ENSG00000113384.14	ENST00000265070.7	2678	4	0	0	0	0	multi-exon	FALSE	canonical	3	909	junction_2	17.1075032271418	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGCAAGCATGTCATTT	-12	True	NA	-17	True	AATAAA	-28	NA	32174319	32124715	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_32126637_32135571_32135687_32143748_32143881_32173809
H1_mix_00070810	chr5	-	5129	16	FSM	ENSG00000150712.11	ENST00000382142.8	5116	16	0	-13	0	0	multi-exon	FALSE	canonical	3	252	junction_1	35.0570328972028	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTTGGTATAACACATGG	5	True	NA	-20	True	ATTAAA	-31	NA	32312939	32226993	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_32230348_32233772_32233935_32234961_32235130_32239000_32239174_32242056_32242128_32243520_32243600_32248001_32248127_32248771_32248879_32255692_32255769_32263112_32263243_32268700_32268795_32270816_32270948_32271832_32271906_32273979_32274123_32276681_32276743_32312757
H1_mix_00070814	chr5	-	4717	20	FSM	ENSG00000056097.16	ENST00000265069.13	4717	20	0	0	0	0	multi-exon	TRUE	canonical	1	196	junction_12	110.843604728199	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTACTGCATCTTGTTA	4	True	NA	-12	True	AGTAAA	-17	NA	32444740	32354349	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_32355940_32363947_32364046_32364163_32364276_32379114_32379211_32380074_32380173_32385507_32385650_32387548_32387700_32388468_32388675_32390274_32390438_32395158_32395305_32397218_32397339_32400006_32400204_32403105_32403398_32403905_32404098_32406773_32407022_32414968_32415188_32417647_32417793_32419820_32420104_32444228_32444329_32444621
H1_mix_00070815	chr5	-	3017	4	FSM	ENSG00000056097.16	ENST00000514356.5	3109	4	92	0	92	0	multi-exon	FALSE	canonical	3	691	junction_2	5.8878405775519	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGAGTACTGCATCTTGTT	8283	False	NA	-13	True	AGTAAA	-16	NA	32380332	32354350	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_32355940_32363947_32364046_32364163_32364276_32379114
H1_mix_00070820	chr5	-	8576	24	FSM	ENSG00000151388.11	ENST00000504830.6	8572	24	0	-4	0	4	multi-exon	FALSE	canonical	3	26	junction_3	11.2983261553667	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTGTGTGATTCTTTT	-4	True	NA	-1	True	AATAAA	-17	NA	33891990	33523530	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_33527367_33534832_33534993_33546058_33546203_33549206_33549384_33561026_33561180_33576053_33577161_33588598_33588810_33595933_33596061_33614237_33614377_33615827_33616073_33624230_33624352_33630779_33630914_33637576_33637747_33641809_33641956_33643377_33643471_33648821_33648967_33649553_33649698_33658183_33658334_33661915_33662041_33683017_33683102_33683858_33684056_33751403_33751549_33881118_33881481_33891729
H1_mix_00070821	chr5	-	1194	3	FSM	ENSG00000151388.11	ENST00000515401.1	1003	3	-168	-23	-168	23	multi-exon	FALSE	canonical	3	66	junction_1	2.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAATGAGAAGGAAATAAAA	NA	False	NA	-52	True	TATAAA	-38	NA	33892187	33751174	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_33751549_33881118_33881481_33891729
H1_mix_00070822	chr5	-	4087	5	FSM	ENSG00000242110.8	ENST00000335606.11	4108	5	0	21	0	-21	multi-exon	FALSE	canonical	3	106	junction_4	3.34477204006491	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAAAAAGTTTATGAAAAG	-5	True	NA	NA	False	AGTAAA	-19	NA	34008050	33986185	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_33989503_33998640_33998828_34004573_34004735_34005755_34005900_34007772
H1_mix_00070823	chr5	-	4146	6	NNC	ENSG00000242110.8	novel	1195	6	NA	NA	-69	-65	intron_retention	TRUE	non_canonical	1	7	junction_5	41.408211745981	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTGGAAAACTTGT	NA	False	NA	NA	False	TTTAAA	-23	NA	34008173	33986229	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_33989503_33998640_33998828_34004573_34004735_34005755_34005900_34007772_34008102_34008121
H1_mix_00070824	chr5	-	1543	5	ISM	ENSG00000082196.21	ENST00000231338.7	1959	6	7455	244	-2445	0	3prime_fragment	FALSE	canonical	2	2	junction_3	5.7227615711298	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCTAAACTTGTGTTTA	7474	False	NA	-1	True	AATAAA	-19	NA	34035758	34019696	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_34020743_34023908_34024009_34028753_34028884_34033303_34033459_34035646
H1_mix_00070825	chr5	-	4831	8	NNC	ENSG00000215158.9	novel	5001	6	NA	NA	-77	10	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	12.076288117376	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTCTCTTCCATTTTGT	272	False	NA	NA	False	AATAAA	-24	NA	34244873	34164687	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_34168476_34169026_34169154_34175444_34175538_34175821_34175958_34179012_34179098_34182679_34182868_34218294_34218451_34244615
H1_mix_00070826	chr5	-	458	4	FSM	ENSG00000215158.9	ENST00000507274.1	458	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	14.7044966667418	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGGCAGTTTAGCGCA	NA	False	NA	NA	False	NA	NA	NA	34218343	34175821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_34175958_34179012_34179098_34182679_34182868_34218294
H1_mix_00070827	chr5	-	1314	2	FSM	ENSG00000272323.1	ENST00000606401.1	1565	2	0	251	0	-251	multi-exon	FALSE	canonical	3	6	junction_1	0	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAAAGGTTTTAATGTTC	NA	False	NA	-86	True	NA	NA	NA	34839278	34837799	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_34839018_34839182
H1_mix_00070829	chr5	-	4513	6	FSM	ENSG00000113456.19	ENST00000382038.7	4512	6	0	-1	0	1	multi-exon	FALSE	canonical	3	214	junction_4	59.030161781923	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGAGTGTATAGTATTTTTT	3	True	NA	1	True	AATAAA	-22	NA	34915504	34905258	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_34908949_34909257_34909357_34911553_34911813_34913469_34913579_34914694_34914962_34915415
H1_mix_00070830	chr5	-	4604	5	FSM	ENSG00000113456.19	ENST00000325577.8	1153	5	0	-3451	0	157	multi-exon	FALSE	canonical	3	87	junction_3	109.984942151187	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGTGTTCTAAACAGAAAC	-6	True	NA	NA	False	NA	NA	NA	34915548	34905102	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_34908949_34909257_34909357_34911553_34911813_34914694_34914962_34915415
H1_mix_00070831	chr5	-	664	4	FSM	ENSG00000113456.19	ENST00000511456.3	664	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	169.431074153736	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAATTGGATATGACGAGT	-10	True	NA	22	True	AATAAA	-38	NA	34915517	34911617	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_34911813_34913926_34914027_34914694_34914962_34915415
H1_mix_00070834	chr5	-	4874	7	FSM	ENSG00000145626.12	ENST00000274278.8	4918	7	0	44	0	-44	multi-exon	FALSE	canonical	3	26	junction_1	6.04611904907235	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTATACAATCAATCAACAG	5	True	NA	NA	False	TTTAAA	-22	NA	35991390	35951049	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_35954479_35955644_35955865_35957187_35957420_35965385_35965918_35968018_35968134_35988449_35988552_35991146
H1_mix_00070835	chr5	-	3005	7	NIC	ENSG00000145626.12	novel	4918	7	NA	NA	0	7	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	9.62057979310787	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCAAATGCATGGTGTCT	5	True	NA	-11	True	AATAAA	-23	NA	35991390	35953100	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_35954479_35955644_35955865_35957187_35957420_35965385_35965918_35968018_35968134_35988449_35988552_35990964
H1_mix_00070836	chr5	-	2342	7	FSM	ENSG00000168671.10	ENST00000282507.8	2342	7	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_3	24.5181338785987	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAATGATTGGCCAAGAGA	13	True	NA	-19	True	AATAAA	-31	NA	36066882	36035020	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_36035975_36037796_36038017_36039476_36039709_36048888_36049421_36051869_36051985_36064248_36064351_36066695
H1_mix_00070837	chr5	-	1233	4	ISM	ENSG00000168671.10	ENST00000515131.1	572	5	404	-727	2	727	3prime_fragment	FALSE	canonical	3	212	junction_1	28.5228952870419	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATTTTGTGTGATCAC	15	True	NA	-5	True	ATTAAA	-20	NA	36066880	36048589	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_36049421_36051869_36051985_36064248_36064351_36066695
H1_mix_00070838	chr5	-	8108	18	FSM	ENSG00000164187.7	ENST00000296603.5	8116	18	0	8	0	-8	multi-exon	FALSE	canonical	3	28	junction_2	6.27346805077407	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACATTACTTTTTCTTATG	11	True	NA	-7	True	AATAAA	-18	NA	36151887	36098414	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_36104107_36105067_36105198_36108533_36108640_36109944_36109992_36111154_36111259_36114423_36114522_36115014_36115121_36116459_36116594_36117734_36117917_36122279_36122464_36122847_36122962_36124190_36124266_36136308_36136520_36137273_36137442_36141106_36141203_36142501_36142600_36143175_36143407_36151555
H1_mix_00070839	chr5	-	4012	12	FSM	ENSG00000152620.13	ENST00000381937.9	4011	12	0	-1	0	1	multi-exon	FALSE	canonical	3	99	junction_5	15.9192175562528	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGATTTCACTTTTTAATA	-12	True	NA	NA	False	ATTAAA	-22	NA	36241925	36192587	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_36195283_36197540_36197665_36200226_36200281_36201105_36201162_36207169_36207266_36211843_36211923_36217747_36217885_36219595_36219680_36225541_36225624_36226474_36226564_36227476_36227566_36241498
H1_mix_00070842	chr5	-	5320	1	FSM	ENSG00000285967.1	ENST00000649921.1	5337	1	20	-3	20	3	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTTTCTATTTCTTCC	-8	True	NA	NA	False	AATAAA	-17	NA	36876680	36871360	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_36871400_36876700
H1_mix_00070847	chr5	-	447	2	FSM	ENSG00000197603.16	ENST00000505431.1	447	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGATATTTATTTTTATT	7241	False	NA	NA	False	AATAAA	-17	NA	37206382	37205193	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_37205455_37206196
H1_mix_00070848	chr5	-	8068	35	FSM	ENSG00000113569.16	ENST00000231498.8	8068	35	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_17	38.2707527889267	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAGTCTTCCATTAAAT	-11	True	NA	-7	True	AATAAA	-15	NA	37371106	37288136	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_37292039_37292878_37292986_37294328_37294466_37298867_37298979_37299447_37299569_37301436_37301551_37302778_37302909_37303259_37303415_37304738_37304844_37305056_37305211_37307296_37307433_37309128_37309268_37310551_37310744_37314197_37314329_37317987_37318086_37323991_37324108_37325900_37325968_37327628_37327777_37328357_37328421_37329189_37329279_37330037_37330133_37331684_37331796_37333462_37333634_37337817_37337919_37341089_37341243_37342548_37342647_37348504_37348597_37349171_37349246_37350159_37350266_37351189_37351357_37352736_37352830_37358080_37358152_37363887_37363985_37364246_37364385_37370820
H1_mix_00070849	chr5	-	9344	35	FSM	ENSG00000113569.16	ENST00000381843.6	4200	35	-353	-4791	-32	1089	multi-exon	FALSE	canonical	3	18	junction_34	58.295631250012	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTATAATCCCAGCTACTC	1	True	NA	NA	False	ACTAAA	-33	NA	37371138	37287047	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_37292039_37292878_37292986_37294328_37294466_37298867_37298979_37299447_37299569_37301436_37301551_37302778_37302909_37303259_37303415_37304738_37304844_37305056_37305211_37307296_37307433_37309128_37309268_37310551_37310744_37314197_37314329_37317987_37318086_37323991_37324108_37325900_37325968_37327628_37327777_37328357_37328421_37329189_37329279_37330037_37330133_37331684_37331796_37333462_37333634_37337817_37337919_37341089_37341243_37342548_37342647_37348504_37348597_37349171_37349246_37350159_37350266_37351189_37351357_37352736_37352830_37358080_37358152_37363887_37363985_37364246_37364385_37370665
H1_mix_00070851	chr5	-	5945	6	NNC	ENSG00000248730.1	novel	1579	4	NA	NA	-50386	0	intron_retention	FALSE	canonical	2	3	junction_2	20.441134997842	13	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTAAGTTCTGTT	NA	False	NA	-4	True	AATAAA	-16	NA	38341372	38282263	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_38285367_38285982_38286362_38296342_38298509_38316870_38317024_38325773_38325817_38341271
H1_mix_00070852	chr5	-	947	4	Antisense	novelGene_ENSG00000164318.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	19.0262975904404	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATACTTCTCTCTTTTTTCC	NA	False	NA	-4	True	AATAAA	-19	NA	38341357	38311915	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr5_-_38312581_38316870_38317024_38325773_38325817_38341271
H1_mix_00070853	chr5	-	890	3	Antisense	novelGene_ENSG00000164318.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	6.5	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATAAGTCCCATACTTCT	NA	False	NA	-15	True	AATAAA	-8	NA	38341354	38311926	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr5_-_38312581_38316870_38317024_38341271
H1_mix_00070854	chr5	-	4090	4	Antisense	novelGene_ENSG00000164318.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_2	13.1402688962847	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTTTGGCTCAAAACCA	NA	False	NA	-22	True	GATAAA	-19	NA	38341345	38313170	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr5_-_38317024_38325773_38325817_38336287_38336408_38341271
H1_mix_00070855	chr5	-	3982	3	Antisense	novelGene_ENSG00000164318.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	42	junction_1	6	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTTTGGCTCAAAACCA	NA	False	NA	-22	True	GATAAA	-19	NA	38341357	38313170	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr5_-_38317024_38325773_38325817_38341271
H1_mix_00070856	chr5	-	2007	3	Antisense	novelGene_ENSG00000164318.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	1.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTGTGTTTGGCTCAAA	NA	False	NA	-26	True	GATAAA	-15	NA	38341357	38313174	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr5_-_38314943_38316870_38317024_38341271
H1_mix_00070857	chr5	-	10542	20	FSM	ENSG00000113594.10	ENST00000453190.7	10553	20	0	11	0	-11	multi-exon	FALSE	canonical	3	89	junction_12	13.8468072862361	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAAAGTAATGGTTTTTA	1	True	NA	NA	False	AATAAA	-15	NA	38556646	38474678	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_38482219_38482588_38482668_38484774_38484869_38485818_38485981_38489077_38489246_38490189_38490292_38493605_38493786_38496381_38496596_38499512_38499584_38502636_38502800_38503975_38504122_38505904_38506075_38506502_38506633_38510463_38510719_38511789_38511965_38523418_38523583_38527154_38527295_38528725_38528841_38530505_38530667_38556333
H1_mix_00070858	chr5	-	511	2	FSM	ENSG00000113594.10	ENST00000508477.5	552	2	0	41	0	-41	multi-exon	FALSE	canonical	3	111	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATTTGAAGTTATTTCC	NA	False	NA	NA	False	AAAAAG	-31	NA	38489245	38485637	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_38485981_38489077
H1_mix_00070859	chr5	-	760	5	FSM	ENSG00000113594.10	ENST00000506990.5	760	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	58.0689245638319	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTAAATGAACAAAACGTTT	11	True	NA	NA	False	AATAAA	-40	NA	38556636	38527174	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_38527295_38528725_38528841_38530505_38530667_38555004_38555066_38556333
H1_mix_00070861	chr5	-	9533	38	FSM	ENSG00000164327.13	ENST00000357387.8	9533	38	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_21	6.04221815992969	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCATTGTTTTATTTG	-4	True	NA	0	True	AATAAA	-21	NA	39074399	38937919	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_38942379_38942832_38942972_38944445_38944570_38944912_38945069_38945490_38945725_38946467_38946553_38947263_38947442_38949711_38950721_38952195_38952426_38952984_38953092_38953460_38953554_38954773_38954862_38955594_38955705_38957651_38957731_38958442_38958520_38958666_38958832_38959194_38959322_38959778_38959979_38960397_38960534_38962314_38962362_38962484_38962587_38962875_38963042_38964791_38964893_38966640_38966722_38967160_38967228_38967336_38967428_38967942_38968031_38971876_38971960_38975536_38975605_38978582_38978651_38981866_38982037_38990948_38991076_38996818_38996883_39002534_39002667_39003557_39003623_39021038_39021137_39074110_39074159_39074328
H1_mix_00070862	chr5	-	9595	39	FSM	ENSG00000164327.13	ENST00000296782.9	7505	39	10	-2100	0	0	multi-exon	FALSE	canonical	2	5	junction_8	7.83609801705951	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCATTGTTTTATTTG	6	True	NA	0	True	AATAAA	-21	NA	39074389	38937919	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_38942379_38942832_38942972_38944445_38944570_38944912_38945069_38945490_38945725_38946467_38946553_38947263_38947442_38949355_38949428_38949711_38950721_38952195_38952426_38952984_38953092_38953460_38953554_38954773_38954862_38955594_38955705_38957651_38957731_38958442_38958520_38958666_38958832_38959194_38959322_38959778_38959979_38960397_38960534_38962314_38962362_38962484_38962587_38962875_38963042_38964791_38964893_38966640_38966722_38967160_38967228_38967336_38967428_38967942_38968031_38971876_38971960_38975536_38975605_38978582_38978651_38981866_38982037_38990948_38991076_38996818_38996883_39002534_39002667_39003557_39003623_39021038_39021137_39074110_39074159_39074328
H1_mix_00070864	chr5	-	4511	15	FSM	ENSG00000153071.15	ENST00000320816.11	4345	15	-166	0	87	0	multi-exon	FALSE	canonical	3	25	junction_8	8.01783725737273	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTGGTACCATCGGTTT	4	True	NA	-2	True	AATAAA	-43	NA	39425146	39371676	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_39373426_39375013_39375085_39375996_39376107_39376649_39377283_39381453_39381617_39382617_39383272_39388304_39388368_39388798_39388853_39389096_39389124_39389851_39389933_39390443_39390576_39392364_39392464_39393253_39393394_39394229_39394422_39424803
H1_mix_00070867	chr5	-	1707	3	FSM	ENSG00000113638.14	ENST00000503936.6	1707	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	61	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTGTTATTAGAGTGCCA	-15	True	NA	NA	False	AATAAA	-7	NA	40755945	40715135	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_40716499_40746797_40747020_40755823
H1_mix_00070868	chr5	-	5078	9	FSM	ENSG00000132356.12	ENST00000397128.7	5254	9	176	0	-9	0	multi-exon	FALSE	canonical	3	125	junction_1	12.9034879005639	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTGTTACAATGTACTT	215	False	NA	-9	True	AATAAA	-16	NA	40798198	40759388	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_40763023_40764513_40764641_40764751_40765239_40767465_40767691_40769415_40769504_40771718_40771864_40775409_40775504_40777444_40777587_40798062
H1_mix_00070869	chr5	-	1918	10	FSM	ENSG00000132356.12	ENST00000354209.7	1918	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	56.7145766966178	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTTATTTCTTTTGCA	8	True	NA	-8	True	AATAAA	-8	NA	40798374	40762769	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_40763023_40764513_40764641_40764751_40765239_40767465_40767691_40769415_40769504_40771718_40771864_40774927_40774973_40775409_40775504_40777444_40777587_40798062
H1_mix_00070870	chr5	-	436	2	FSM	ENSG00000132356.12	ENST00000513152.1	436	2	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTTTGGTGTAGTTCAT	5089	False	NA	NA	False	NA	NA	NA	40764788	40764241	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_40764641_40764751
H1_mix_00070871	chr5	-	692	5	FSM	ENSG00000132356.12	ENST00000509874.5	692	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	63.0991283616501	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTGGATCCCATGAAGAG	-14	True	NA	NA	False	TTTAAA	-35	NA	40798189	40767506	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_40767691_40771718_40771864_40775409_40775504_40777444_40777587_40798062
H1_mix_00070872	chr5	-	668	2	FSM	ENSG00000132356.12	ENST00000511248.1	668	2	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTCCCATTCATGTAT	254	False	NA	NA	False	AATAAA	-2	NA	40798159	40777015	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_40777587_40798062
H1_mix_00070873	chr5	-	3078	5	NIC	ENSG00000145592.14	novel	7573	4	NA	NA	0	5	combination_of_known_splicesites	FALSE	canonical	3	59	junction_1	4788.51733316274	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGCAGCAAATTTGTCT	5	True	NA	NA	False	AATAAA	-23	NA	40835212	40825256	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_40827952_40832441_40832574_40834180_40834266_40834470_40834607_40835182
H1_mix_00070874	chr5	-	7578	4	FSM	ENSG00000145592.14	ENST00000274242.10	7573	4	0	-5	0	5	multi-exon	FALSE	canonical	3	8479	junction_3	1607.97104727942	2760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGCAGCAAATTTGTCT	-5	True	NA	NA	False	AATAAA	-23	NA	40835222	40825256	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_40832574_40834180_40834266_40834470_40834607_40835182
H1_mix_00070875	chr5	-	506	4	FSM	ENSG00000145592.14	ENST00000504562.1	505	4	0	-1	0	1	multi-exon	FALSE	canonical	3	715	junction_3	5211.97367180184	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATCTGGTTTTGGTAAG	2	True	NA	-32	True	AATAAA	-20	NA	40835186	40832456	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_40832574_40834180_40834266_40834470_40834607_40835018
H1_mix_00070880	chr5	-	2056	5	FSM	ENSG00000250722.6	ENST00000514985.6	2056	5	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_1	116.233332138419	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTTTGTTATGTAGGCT	-1	True	NA	-2	True	AATAAA	-24	NA	42811892	42799879	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_42801332_42804655_42804774_42806895_42807109_42808150_42808367_42811835
H1_mix_00070882	chr5	-	770	2	FSM	ENSG00000177738.5	ENST00000665537.1	768	2	0	-2	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATTTATTTATTTATT	11	True	NA	89	True	GATAAA	-40	NA	43067436	43014730	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_43015151_43067086
H1_mix_00070883	chr5	-	551	1	Genic_Genomic	ENSG00000177738.5	novel	NA	NA	NA	NA	-78	-2285	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCCGAGAAACTCCGTACAA	777	False	NA	NA	False	AAAAAG	-12	NA	43018889	43018338	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr5_-_43018300_43018900
H1_mix_00070884	chr5	-	5350	11	FSM	ENSG00000112972.15	ENST00000325110.11	5350	11	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_10	43.6312961072669	925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTCTCTCAGGCTCTGT	-1	True	NA	-1	True	AATAAA	-15	NA	43313412	43287469	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_43291221_43292473_43292638_43292847_43292974_43294055_43294163_43294690_43294862_43295751_43295918_43297001_43297167_43298008_43298135_43298517_43298976_43307765_43307825_43313355
H1_mix_00070885	chr5	-	3438	10	FSM	ENSG00000112972.15	ENST00000433297.2	3466	10	28	0	-10	0	multi-exon	FALSE	canonical	3	106	junction_9	36.3318042491699	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACTTGAGTATTCTTTTT	NA	False	NA	-8	True	AATAAA	-20	NA	43313484	43289394	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_43291221_43292473_43292638_43292847_43292974_43294055_43294163_43294690_43294862_43295751_43295918_43297001_43297167_43298008_43298135_43298517_43298976_43313355
H1_mix_00070887	chr5	-	2821	5	FSM	ENSG00000151881.15	ENST00000500337.6	2950	5	0	129	0	-129	multi-exon	FALSE	canonical	1	1	junction_3	30.144443932506	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTTGAACCTGGGAGGCA	27	True	NA	NA	False	NA	NA	NA	43483836	43444380	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_43446558_43453657_43454044_43476113_43476259_43479889_43479988_43483821
H1_mix_00070888	chr5	-	2678	3	FSM	ENSG00000151881.15	ENST00000397080.8	2736	3	0	58	0	-58	multi-exon	FALSE	canonical	3	67	junction_2	6.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGAGACTGTCTTAAAAAA	-2	True	NA	NA	False	NA	NA	NA	43483865	43444309	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_43446558_43453657_43454044_43483821
H1_mix_00070889	chr5	-	2631	4	FSM	ENSG00000151881.15	ENST00000506860.1	736	4	-28	-1867	6	-223	multi-exon	FALSE	canonical	1	2	junction_2	33.9542175419916	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAAACCCCGTCTCTACT	-22	True	NA	NA	False	NA	NA	NA	43483885	43444474	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_43446558_43453657_43454044_43479889_43479988_43483821
H1_mix_00070891	chr5	-	2506	13	FSM	ENSG00000172244.9	ENST00000306862.7	2502	13	0	-4	0	4	multi-exon	TRUE	canonical	2	47	junction_12	15.4919333848297	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCACATTTAATTCTTAT	2	True	NA	-5	True	AATAAA	-19	NA	43515148	43486704	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_43487112_43487908_43487950_43490630_43490730_43492214_43492310_43492719_43492891_43493542_43493613_43494509_43494602_43502371_43502496_43503664_43503761_43505747_43506395_43508576_43508667_43509144_43509376_43514805
H1_mix_00070894	chr5	-	1680	1	FSM	ENSG00000249855.1	ENST00000513637.1	1382	1	-23	-275	-23	275	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAGTTTAATGAGAAA	NA	False	NA	NA	False	NA	NA	NA	43496477	43494797	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_43494800_43496500
H1_mix_00070895	chr5	-	2800	11	FSM	ENSG00000172239.14	ENST00000306846.8	2780	11	0	-20	0	20	multi-exon	FALSE	canonical	3	890	junction_10	160.119830127314	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAAATAATTTGCTGTT	-15	True	NA	14	True	AATAAA	-45	NA	43557077	43526246	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_43527470_43529785_43529880_43533737_43533793_43534852_43534971_43535533_43535641_43536818_43536945_43538923_43539036_43543003_43543117_43547727_43547914_43555829_43556000_43556581
H1_mix_00070896	chr5	-	1734	11	FSM	ENSG00000172239.14	ENST00000436644.6	1734	11	0	0	0	0	multi-exon	FALSE	canonical	3	452	junction_10	266.042552987299	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTTGGTTAGATGCTTAT	-31	True	NA	1	True	AATAAA	-37	NA	43557093	43527091	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_43527470_43529785_43529880_43533737_43533793_43534852_43534971_43535533_43535641_43536818_43536945_43538923_43539036_43543003_43543117_43547727_43547914_43555829_43556000_43556818
H1_mix_00070897	chr5	-	2421	11	FSM	ENSG00000172239.14	ENST00000338972.8	1814	11	239	-846	239	20	multi-exon	FALSE	canonical	3	88	junction_10	366.83238679266	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAAATAATTTGCTGTT	240	False	NA	14	True	AATAAA	-45	NA	43557456	43526246	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_43527470_43529785_43529880_43533737_43533793_43534852_43534971_43535533_43535641_43536818_43536945_43538923_43539036_43543003_43543117_43547727_43547914_43555829_43556000_43557339
H1_mix_00070898	chr5	-	4864	3	FSM	ENSG00000248092.8	ENST00000513560.7	4803	3	-156	95	-64	-95	multi-exon	FALSE	canonical	3	20	junction_2	1	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATATATAGAGTCCTAGTC	641	False	NA	-4	True	ATTAAA	-16	NA	43603294	43571688	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_43575936_43583466_43583567_43602777
H1_mix_00070901	chr5	-	775	3	FSM	ENSG00000251141.6	ENST00000503179.5	775	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	2.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTAGAATTTATAGCACC	-1	True	NA	NA	False	AAGAAA	-14	NA	44808759	44776755	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_44777329_44777908_44777993_44808641
H1_mix_00070903	chr5	-	4756	2	FSM	ENSG00000164588.8	ENST00000634658.1	4738	2	0	-18	0	18	multi-exon	FALSE	canonical	3	40	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCTTTGTAGGACTTAAT	NA	False	NA	NA	False	AATACA	-21	NA	45696498	45641682	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_45645609_45695668
H1_mix_00070904	chr5	-	7225	7	FSM	ENSG00000170571.12	ENST00000505896.5	2649	7	0	-4576	0	2741	multi-exon	FALSE	canonical	3	202	junction_5	24.5696289484938	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTGTCATGCTTTTT	2529	False	NA	NA	False	AATAAA	-35	NA	50411998	50393450	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_50399291_50399858_50399914_50402285_50402320_50403177_50403455_50405724_50405853_50410876_50410966_50411196
H1_mix_00070905	chr5	-	4545	9	FSM	ENSG00000170571.12	ENST00000303221.10	4202	9	-343	0	-281	0	multi-exon	FALSE	canonical	3	195	junction_7	26.4988207284777	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTGCTTCTTTTACTTT	6	True	NA	-1	True	AATAAA	-25	NA	50441631	50396191	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_50399291_50399858_50399914_50402285_50402320_50403177_50403455_50405724_50405853_50410876_50410966_50411196_50411384_50428143_50428228_50441039
H1_mix_00070906	chr5	-	3685	7	FSM	ENSG00000164172.20	ENST00000450852.8	3705	7	0	20	0	-20	multi-exon	FALSE	canonical	3	214	junction_6	21.3229141222926	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGCTCTCTTTCTCTAA	0	True	NA	-18	True	AATAAA	-3	NA	53109757	53095698	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_53098668_53100410_53100535_53101358_53101510_53102096_53102225_53107076_53107222_53108521_53108644_53109711
H1_mix_00070907	chr5	-	4118	7	FSM	ENSG00000164172.20	ENST00000396954.8	4166	7	0	48	0	-48	multi-exon	FALSE	canonical	2	14	junction_6	87.9974747112413	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCTCTGTGAAAAACAAAGA	0	True	NA	-46	True	AATACA	-33	NA	53109757	53095726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_53098668_53100410_53100535_53101358_53101510_53102096_53102225_53107076_53107222_53108521_53108644_53109250
H1_mix_00070908	chr5	-	3329	5	FSM	ENSG00000185305.12	ENST00000504924.6	3328	5	0	-1	0	1	multi-exon	FALSE	canonical	3	142	junction_3	5.09901951359278	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTCAGACTAACTCCTT	10	True	NA	-29	True	AATAAA	-17	NA	54310573	53883940	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_53886714_54113201_54113411_54154579_54154640_54171783_54171929_54310431
H1_mix_00070912	chr5	-	844	6	FSM	ENSG00000067248.11	ENST00000513447.1	844	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	113.379715998939	256	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTTGGAGGAATTATGC	NA	False	NA	NA	False	NA	NA	NA	55276360	55270443	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_55270707_55272086_55272176_55273292_55273427_55274613_55274732_55274865_55275011_55276265
H1_mix_00070913	chr5	-	1542	6	FSM	ENSG00000067113.17	ENST00000307259.9	1542	6	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_5	141.123208580304	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACACTTGCAGGCATTTG	-1	True	NA	-11	True	ATTAAA	-19	NA	55534964	55424853	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_55425335_55425862_55426040_55441850_55441909_55467868_55468150_55475298_55475451_55534571
H1_mix_00070914	chr5	-	1550	6	FSM	ENSG00000067113.17	ENST00000264775.9	1550	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	322.582454575571	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACACTTGCAGGCATTTG	-6	True	NA	-11	True	ATTAAA	-19	NA	55534969	55424853	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_55425335_55425862_55426040_55441850_55441909_55467868_55468150_55490959_55491115_55534571
H1_mix_00070916	chr5	-	7150	17	NIC	ENSG00000177058.12	novel	2522	16	NA	NA	0	4575	combination_of_known_junctions	TRUE	canonical	3	80	junction_14	48.448426187029	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGGATTTTGTTTAATTG	-4	True	NA	3	True	ATTAAA	-27	NA	55712261	55621269	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_55626660_55627890_55627981_55633753_55633903_55635543_55635658_55645788_55645896_55649206_55649315_55652528_55652724_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55704321_55704435_55711451_55711500_55712216
H1_mix_00070917	chr5	-	2381	15	FSM	ENSG00000177058.12	ENST00000508124.5	2370	15	0	-11	0	0	multi-exon	FALSE	canonical	3	12	junction_12	56.3679602147843	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCCTCTTTTATTTCTAA	8	True	NA	-2	True	AATAAA	-27	NA	55712315	55625846	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_55626660_55627890_55627981_55633753_55633903_55635543_55635658_55645788_55645896_55649206_55649315_55652528_55652724_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55697845_55697993_55711451_55711500_55712216
H1_mix_00070919	chr5	-	2348	15	NIC	ENSG00000177058.12	novel	2522	16	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	60.4242230789431	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCTGTCTAACTCCTCT	7	True	NA	-13	True	AATAAA	-16	NA	55712250	55625857	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_55626660_55633753_55633903_55635543_55635658_55645788_55645896_55649206_55649315_55652528_55652724_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55711451_55711500_55712216
H1_mix_00070920	chr5	-	2482	17	NIC	ENSG00000177058.12	novel	2522	16	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	67.1863081289633	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCTGTCTAACTCCTCT	14	True	NA	-13	True	AATAAA	-16	NA	55712275	55625857	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_55626660_55627890_55627981_55633753_55633809_55635543_55635658_55645788_55645896_55649206_55649315_55652528_55652724_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55704321_55704435_55711451_55711500_55712216
H1_mix_00070921	chr5	-	2387	15	NIC	ENSG00000177058.12	novel	2522	16	NA	NA	-5	0	combination_of_known_junctions	TRUE	canonical	3	20	junction_5	58.1448314863104	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCTGTCTAACTCCTCT	16	False	NA	-13	True	AATAAA	-16	NA	55712307	55625857	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_55626660_55627890_55627981_55633753_55633903_55635543_55635658_55645788_55645896_55652528_55652724_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55711451_55711500_55712216
H1_mix_00070923	chr5	-	1260	10	NIC	ENSG00000177058.12	novel	2522	16	NA	NA	3	-17	combination_of_known_junctions	FALSE	canonical	3	17	junction_7	87.681381668847	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAATTTTGGAAAATATAT	11	True	NA	NA	False	AATAAA	-16	NA	55712312	55664576	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55702738_55702895_55704321_55704435_55711451_55711500_55712216
H1_mix_00070928	chr5	-	6815	3	FSM	ENSG00000134352.20	ENST00000523039.5	481	3	-23	-6311	-23	-87	multi-exon	FALSE	canonical	3	52	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTATTTAAACATCTGT	3881	False	NA	NA	False	NA	NA	NA	55947617	55935211	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_55941820_55942669_55942752_55947492
H1_mix_00070929	chr5	-	9017	17	FSM	ENSG00000134352.20	ENST00000381298.7	9027	17	0	10	0	-6	multi-exon	FALSE	canonical	3	17	junction_5	10.1665812837945	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCAAAACCCTCAGGTA	23	True	NA	NA	False	AATAAA	-10	NA	55994963	55935104	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_55941820_55942669_55942752_55947492_55947590_55951463_55951605_55951928_55952076_55952249_55952352_55954809_55954993_55956024_55956236_55957208_55957292_55960401_55960562_55963351_55963507_55964145_55964313_55968275_55968397_55969549_55969856_55976214_55976294_55982723_55982812_55994783
H1_mix_00070931	chr5	-	5649	13	FSM	ENSG00000155545.20	ENST00000381199.8	5199	13	1	-451	0	450	multi-exon	FALSE	canonical	3	46	junction_12	11.1679103785006	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCCATCTCAAAAAAAAAAAA	-2	True	NA	NA	False	NA	NA	NA	56952122	56919151	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_56923586_56923690_56923834_56923914_56924043_56928766_56928862_56930663_56930746_56933246_56933399_56935427_56935501_56935665_56935752_56937577_56937699_56938882_56939018_56946925_56947072_56950627_56950653_56952093
H1_mix_00070932	chr5	-	5241	14	FSM	ENSG00000155545.20	ENST00000452157.5	5240	14	0	-1	0	0	multi-exon	TRUE	canonical	2	3	junction_9	24.7460474400524	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTGGTTTGTGTGAAT	-2	True	NA	-4	True	AATAAA	-16	NA	56952122	56919602	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_56923586_56923690_56923834_56923914_56924043_56928766_56928862_56930663_56930746_56933246_56933399_56935427_56935501_56935665_56935752_56937577_56937699_56938295_56938339_56938882_56939018_56946925_56947072_56950627_56950653_56952093
H1_mix_00070933	chr5	-	5198	13	FSM	ENSG00000155545.20	ENST00000381213.7	5198	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	16.4170896730612	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTGGTTTGTGTGAAT	-5	True	NA	-4	True	AATAAA	-16	NA	56952125	56919602	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_56923586_56923690_56923834_56923914_56924043_56928766_56928859_56930663_56930746_56933246_56933399_56935427_56935501_56935665_56935752_56937577_56937699_56938882_56939018_56946925_56947072_56950627_56950653_56952093
H1_mix_00070934	chr5	-	2786	14	FSM	ENSG00000145632.15	ENST00000274289.8	2786	14	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_7	11.2006973578334	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGTCTCCTGTCTTTAG	-2	True	NA	59	True	AATAAA	-20	NA	58460086	58453981	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_58454775_58454910_58455022_58455284_58455415_58455538_58455780_58456025_58456156_58456491_58456590_58456944_58457093_58457180_58457380_58457487_58457584_58458083_58458172_58458398_58458529_58458724_58458842_58458984_58459093_58459689
H1_mix_00070939	chr5	-	3828	8	FSM	ENSG00000164181.14	ENST00000425382.5	3827	8	0	-1	0	0	multi-exon	FALSE	canonical	2	14	junction_7	5.19418827505653	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTGTGTATATTTTTCAT	2	True	NA	-1	True	AATAAA	-19	NA	60844274	60751790	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_60754834_60757508_60757646_60764226_60764333_60766573_60766631_60767822_60767904_60771902_60772094_60787333_60787432_60844159
H1_mix_00070940	chr5	-	9414	12	FSM	ENSG00000049167.16	ENST00000676185.1	9414	12	0	0	0	0	multi-exon	TRUE	canonical	3	97	junction_2	25.0862973363864	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGCCAATAGAACTTTTT	-16	True	NA	NA	False	AATAAA	-30	NA	60945070	60866453	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_60874684_60887439_60887521_60890888_60891087_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60928863_60928960_60944931
H1_mix_00070941	chr5	-	2082	13	FSM	ENSG00000049167.16	ENST00000675042.2	2091	13	9	0	0	0	multi-exon	FALSE	canonical	1	2	junction_12	55.1323533770225	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCACACGTGATTATCAT	-10	True	NA	-5	True	AATAAA	-30	NA	60945064	60873821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_60874684_60887439_60887521_60890888_60891087_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60928863_60928960_60932106_60932149_60944931
H1_mix_00070942	chr5	-	1248	10	FSM	ENSG00000049167.16	ENST00000683199.1	1248	10	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	17.9009621094634	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATAATACTGTGCAACTT	391	False	NA	NA	False	AATGAA	-3	NA	60945030	60890703	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_60891087_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60928863_60928960_60944931
H1_mix_00070944	chr5	-	881	6	FSM	ENSG00000049167.16	ENST00000675229.1	881	6	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_4	12.7216351150314	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTGTACTTGTCTCAT	3	True	NA	0	True	ATTAAA	-18	NA	60945051	60903359	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60928863_60928960_60944931
H1_mix_00070945	chr5	-	4695	3	FSM	ENSG00000188725.8	ENST00000339020.8	2888	3	0	-1807	0	1807	multi-exon	FALSE	canonical	3	512	junction_2	0.5	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTACAAGCATTCCTACACA	-51	True	NA	NA	False	NA	NA	NA	61162468	61155896	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_61160200_61161087_61161228_61162216
H1_mix_00070946	chr5	-	2831	12	FSM	ENSG00000086189.11	ENST00000199320.9	2831	12	0	0	0	0	multi-exon	TRUE	canonical	3	420	junction_6	21.066208106039	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTACAGCTGCAAGAAAAC	-11	True	NA	NA	False	AATAAA	-16	NA	62403905	62387253	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_62389053_62390875_62390983_62392170_62392235_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62402035_62402123_62403272_62403347_62403693
H1_mix_00070950	chr5	-	709	1	FSM	ENSG00000268942.2	ENST00000600888.2	237	1	26	-498	26	498	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCCTTGGGGATGAAATA	NA	False	NA	NA	False	AATAAA	-10	NA	62512456	62511747	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_62511700_62512500
H1_mix_00070951	chr5	-	471	1	FSM	ENSG00000217416.4	ENST00000426679.1	387	1	38	-122	38	122	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTGTGTTGGATTCCGG	NA	False	NA	NA	False	AATAAA	-22	NA	62777225	62776754	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_62776800_62777200
H1_mix_00070952	chr5	-	4622	1	FSM	ENSG00000178394.5	ENST00000323865.5	4572	1	79	-129	79	129	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAGTAACACATGCATCT	76	False	NA	NA	False	AATAAA	-35	NA	63962366	63957744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_63957700_63962400
H1_mix_00070955	chr5	-	361	2	FSM	ENSG00000250081.1	ENST00000510261.1	365	2	4	0	4	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGAAGTGCTAAATACGG	NA	False	NA	NA	False	AAGAAA	-36	NA	65487044	65486443	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_65486653_65486892
H1_mix_00070957	chr5	-	1615	10	ISM	ENSG00000123219.13	ENST00000508421.5	1586	11	1561	-57	0	3	3prime_fragment	TRUE	canonical	3	51	junction_9	128.649394350174	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGTGATGTGGGATATTT	1582	False	NA	2	True	AATAAA	-24	NA	65561564	65517762	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_65518634_65521474_65521529_65528451_65528579_65528918_65529018_65529116_65529200_65542801_65542849_65551563_65551637_65552492_65552550_65554796_65554899_65561462
H1_mix_00070959	chr5	-	1700	11	FSM	ENSG00000123219.13	ENST00000514814.5	1697	11	0	-3	0	3	multi-exon	FALSE	canonical	3	95	junction_9	110.586843702133	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGTGATGTGGGATATTT	-22	True	NA	2	True	AATAAA	-24	NA	65563168	65517762	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_65518634_65521474_65521529_65528451_65528579_65528918_65529018_65529116_65529200_65542801_65542849_65551563_65551637_65552492_65552550_65554796_65554947_65561496_65561565_65563097
H1_mix_00070960	chr5	-	1040	10	FSM	ENSG00000123219.13	ENST00000510693.5	1040	10	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	142.779550356485	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATCTATTATTCATTTTT	1	True	NA	NA	False	NA	NA	NA	65563145	65518334	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_65518634_65521474_65521529_65528451_65528579_65529116_65529200_65542801_65542849_65551563_65551637_65552492_65552550_65554796_65554947_65561462_65561565_65563097
H1_mix_00070966	chr5	-	269	1	FSM	ENSG00000269961.1	ENST00000602982.1	507	1	131	107	131	-107	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATAATTAGCCTCTGGGTC	1514	False	NA	NA	False	NA	NA	NA	65925004	65924735	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_65924700_65925000
H1_mix_00070967	chr5	-	405	1	FSM	ENSG00000250669.1	ENST00000515142.1	405	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGCAAAGTGCATCTGC	9202	False	NA	NA	False	CATAAA	-28	NA	67690437	67690032	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_67690000_67690400
H1_mix_00070968	chr5	-	267	1	FSM	ENSG00000249721.1	ENST00000514578.1	389	1	105	17	105	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAAAAAGGCTTGACTA	6544	False	NA	NA	False	NA	NA	NA	67693095	67692828	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_67692800_67693100
H1_mix_00070972	chr5	-	1189	4	NNC	ENSG00000273841.6	novel	1163	3	NA	NA	0	44052	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	761.83652372992	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAGAGACAAGGTCTCAC	-9	True	NA	NA	False	NA	NA	NA	69369520	69317973	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_69318001_69364743_69365755_69366502_69366596_69369462
H1_mix_00070973	chr5	-	1626	5	FSM	ENSG00000085231.14	ENST00000380822.9	1626	5	0	0	0	0	multi-exon	FALSE	canonical	3	838	junction_1	380.153258568173	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCTTTTGTGTCCAGT	-9	True	NA	NA	False	TATAAA	-16	NA	69369520	69350983	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_69352254_69355648_69355795_69355894_69355954_69366502_69366596_69369462
H1_mix_00070975	chr5	-	1183	5	FSM	ENSG00000085231.14	ENST00000380818.7	1183	5	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_4	373.43699267748	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGTATTCCTTTTTTCTT	NA	False	NA	-6	True	AATAAA	-17	NA	69370013	69351725	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_69352254_69355648_69355795_69355894_69355954_69366502_69366596_69369656
H1_mix_00070977	chr5	-	1330	2	FSM	ENSG00000273841.6	ENST00000687205.1	1331	2	0	1	0	0	multi-exon	FALSE	canonical	3	1373	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTGGTGCTTTGGCAGT	3172	False	NA	-17	True	AATAAA	-16	NA	69366821	69364743	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_69365755_69366502
H1_mix_00070978	chr5	-	1162	3	FSM	ENSG00000273841.6	ENST00000217893.10	1163	3	0	1	0	0	multi-exon	FALSE	canonical	3	1373	junction_1	204	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTGGTGCTTTGGCAGT	-9	True	NA	-17	True	AATAAA	-16	NA	69369520	69364743	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_69365755_69366502_69366596_69369462
H1_mix_00070979	chr5	-	1461	3	FSM	ENSG00000273841.6	ENST00000328663.8	1461	3	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	657.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTGGTGCTTTGGCAGT	NA	False	NA	-17	True	AATAAA	-16	NA	69370013	69364743	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_69365755_69366502_69366596_69369656
H1_mix_00070982	chr5	-	1057	3	FSM	ENSG00000273841.6	ENST00000508954.4	1705	3	0	648	0	-489	multi-exon	FALSE	canonical	3	53	junction_2	660	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGCCATTGATCAAGCC	528	False	NA	NA	False	AAGAAA	-8	NA	69369465	69365431	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_69365755_69366502_69366596_69368824
H1_mix_00070983	chr5	-	853	2	Intergenic	novelGene_1155	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTAAAATGGTTTAATTG	NA	False	NA	NA	False	AATAAA	-17	NA	69625903	69624186	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_-_69624355_69625218
H1_mix_00070986	chr5	-	2981	5	Fusion	ENSG00000253816.3_ENSG00000254701.3	novel	497	4	NA	NA	-14308	59966	multi-exon	FALSE	canonical	3	19	junction_3	59.0973772683695	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGGCAGAGTTTGCAGT	NA	False	NA	NA	False	NA	NA	NA	70222053	70137288	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr5_-_70139721_70142330_70142446_70197254_70197391_70219917_70220093_70221930
H1_mix_00070989	chr5	-	295	1	FSM	ENSG00000254335.1	ENST00000518435.1	295	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAGTAGGCAAATCAAAAT	NA	False	NA	NA	False	NA	NA	NA	70860579	70860284	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_70860300_70860600
H1_mix_00070990	chr5	-	5935	6	FSM	ENSG00000249437.8	ENST00000315147.8	5935	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	0.632455532033676	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATTAACTGGAGCTAC	NA	False	NA	NA	False	AATAAA	-15	NA	70987150	70968482	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_70970469_70974128_70974294_70976159_70976247_70976905_70977059_70979868_70980037_70983774
H1_mix_00070992	chr5	-	4334	16	FSM	ENSG00000145736.14	ENST00000274400.9	4336	16	0	2	0	-2	multi-exon	FALSE	canonical	3	131	junction_3	135.961007482129	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCACTGATATATTTTATT	80	False	NA	NA	False	AATAAA	-22	NA	71067601	71032671	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_71035797_71037506_71037547_71041521_71041625_71042180_71042285_71045443_71045508_71048005_71048114_71048761_71048850_71049067_71049159_71055351_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71067493
H1_mix_00070994	chr5	-	2077	17	FSM	ENSG00000145736.14	ENST00000330280.11	2077	17	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_16	146.977676876456	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGGCTGAGGCAGGAGA	31	False	NA	NA	False	NA	NA	NA	71067650	71035075	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_71035797_71037506_71037547_71041521_71041625_71042180_71042285_71045443_71045508_71048005_71048114_71048761_71048850_71049067_71049159_71055351_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71065124_71065223_71067493
H1_mix_00070995	chr5	-	1883	18	NNC	ENSG00000145736.14	novel	2077	17	NA	NA	0	-18	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	174.444625413454	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGTTAATTCATTAATT	7	True	NA	NA	False	ATTAAA	-17	NA	71067674	71035346	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_71035797_71037506_71037547_71038428_71038482_71041521_71041625_71042180_71042285_71045443_71045508_71048005_71048114_71048761_71048850_71049067_71049159_71055351_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71065124_71065223_71067493
H1_mix_00070996	chr5	-	1583	16	NIC	ENSG00000145736.14	novel	4336	16	NA	NA	0	-21	combination_of_known_junctions	FALSE	canonical	3	131	junction_3	138.887228434519	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTATGTTAATTCATTA	-8	True	NA	NA	False	ATTAAA	-14	NA	71067689	71035349	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_71035797_71037506_71037547_71041521_71041625_71042180_71042285_71045443_71045508_71048005_71048114_71048761_71048850_71049067_71049159_71055351_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71067654
H1_mix_00070998	chr5	-	1079	9	ISM	ENSG00000145736.14	ENST00000330280.11	2077	17	-26	19981	0	-27	5prime_fragment	FALSE	canonical	3	67	junction_8	174.211796385893	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAATTGTAAGTTGGTTG	5	True	NA	NA	False	ATTAAA	-19	NA	71067676	71055056	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71065124_71065223_71067493
H1_mix_00070999	chr5	-	860	8	FSM	ENSG00000145736.14	ENST00000523003.5	860	8	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_7	143.187047641345	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAACATTTATTAATTTAT	-8	True	NA	NA	False	AATATA	-31	NA	71067689	71055029	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71067654
H1_mix_00071000	chr5	-	1005	9	NIC	ENSG00000145736.14	novel	860	8	NA	NA	-47	0	combination_of_known_splicesites	FALSE	canonical	3	55	junction_8	177.134129969354	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAACATTTATTAATTTAT	NA	False	NA	NA	False	AATATA	-31	NA	71067736	71055029	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71065124_71065223_71067654
H1_mix_00071001	chr5	-	975	8	ISM	ENSG00000145736.14	ENST00000522654.5	1106	10	10	6962	10	-21	5prime_fragment	FALSE	canonical	3	164	junction_7	133.980199572739	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTAAGTTGGTTGTACCTT	17	False	NA	NA	False	ATTAAA	-25	NA	71067664	71055050	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71067493
H1_mix_00071005	chr5	-	2774	11	FSM	ENSG00000113048.17	ENST00000261413.10	2770	11	0	-4	0	4	multi-exon	FALSE	canonical	3	644	junction_5	58.7676781913324	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCACCACTAATATTTATT	-6	True	NA	NA	False	ATTAAA	-29	NA	72320240	72219398	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_72221149_72223682_72223851_72226056_72226200_72228265_72228369_72232442_72232559_72234118_72234198_72238013_72238129_72295530_72295590_72297631_72297703_72314080_72314159_72320148
H1_mix_00071007	chr5	-	436	1	FSM	ENSG00000272081.1	ENST00000606587.1	494	1	158	-100	158	100	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTCAGGTGACTTAAAAC	1189	False	NA	NA	False	AATAGA	-21	NA	72955541	72955105	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_72955100_72955500
H1_mix_00071008	chr5	-	896	1	FSM	ENSG00000272525.1	ENST00000607001.1	744	1	-157	5	-157	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTTTGTGGTCTTAACC	6913	False	NA	-16	True	AATAAA	-16	NA	73498450	73497554	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_73497600_73498400
H1_mix_00071011	chr5	-	4821	3	FSM	ENSG00000171617.15	ENST00000302351.9	4821	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGTGTGGGTCTTCAT	-1	True	NA	-2	True	AATAAA	-22	NA	74640728	74627408	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_74629993_74634683_74636499_74640306
H1_mix_00071014	chr5	-	469	2	FSM	ENSG00000164347.18	ENST00000513331.1	469	2	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTATGCAATCACATAT	NA	False	NA	NA	False	NA	NA	NA	74741848	74739988	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_74740138_74741528
H1_mix_00071015	chr5	-	566	5	FSM	ENSG00000164347.18	ENST00000506778.1	566	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	116.674761623926	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATACACCAGGTATGGTAC	-17	True	NA	NA	False	NA	NA	NA	74767147	74751378	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_74751494_74758848_74758947_74759368_74759427_74760901_74760987_74766937
H1_mix_00071017	chr5	-	5953	12	FSM	ENSG00000198780.13	ENST00000510609.5	5908	12	-43	-2	0	0	multi-exon	FALSE	canonical	3	39	junction_8	67.5103909969568	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGTGATTATAGATTAAT	-13	True	NA	-1	True	AATAAA	-14	NA	74866387	74777573	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_74782009_74782930_74783135_74796029_74796187_74800879_74801031_74801589_74801630_74804492_74804606_74805155_74805285_74813839_74814020_74838964_74839051_74840073_74840174_74841544_74841680_74866164
H1_mix_00071019	chr5	-	6518	13	FSM	ENSG00000198780.13	ENST00000389156.9	6118	13	0	-400	0	400	multi-exon	TRUE	canonical	3	44	junction_12	65.3496471978915	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACAGGTGAAAAGATTTCT	6	True	NA	NA	False	NA	NA	NA	74866966	74777173	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_74782009_74782930_74783135_74796029_74796187_74800879_74801031_74801589_74801630_74804492_74804606_74805155_74805285_74813839_74814020_74834425_74834598_74838964_74839051_74840073_74840174_74841544_74841680_74866750
H1_mix_00071023	chr5	-	2038	17	FSM	ENSG00000113163.19	ENST00000644445.1	2038	17	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	27.9642629082191	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTTTACTGTGGTTCT	751	False	NA	0	True	AATAAA	-22	NA	75511266	75368485	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_75368659_75379336_75379474_75381071_75381202_75381948_75382078_75384641_75384713_75385901_75386035_75389591_75389688_75400204_75400298_75402971_75403059_75411010_75411104_75416875_75417034_75419340_75419425_75425360_75425500_75426370_75426479_75459064_75459182_75505981_75506117_75511111
H1_mix_00071024	chr5	-	2467	18	FSM	ENSG00000113163.19	ENST00000261415.12	2465	18	0	-2	0	0	multi-exon	FALSE	canonical	3	15	junction_7	43.7102760834808	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTTTACTGTGGTTCT	0	True	NA	0	True	AATAAA	-22	NA	75511617	75368485	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_75368659_75379336_75379474_75381071_75381202_75381948_75382078_75384641_75384713_75385901_75386035_75389591_75389688_75399309_75399388_75400204_75400298_75402971_75403059_75411010_75411104_75416875_75417034_75419340_75419425_75425360_75425500_75426370_75426479_75459064_75459182_75505981_75506117_75511111
H1_mix_00071026	chr5	-	3983	17	FSM	ENSG00000113163.19	ENST00000646713.1	3983	17	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	34.0236590477861	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTGTGATGTTTAAAAA	0	True	NA	-40	True	NA	NA	NA	75511617	75372418	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_75374192_75379336_75379474_75381071_75381202_75381948_75382078_75384641_75384713_75385901_75386035_75389591_75389688_75400204_75400292_75402971_75403059_75411010_75411104_75416875_75417034_75419340_75419425_75425360_75425500_75426370_75426479_75459064_75459182_75505981_75506117_75511111
H1_mix_00071027	chr5	-	5278	17	FSM	ENSG00000113163.19	ENST00000645483.1	3154	17	26	-2150	0	0	multi-exon	FALSE	canonical	3	69	junction_1	18.1929759797566	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATTATGGACAAATATGC	10	True	NA	12	True	ATTAAA	-29	NA	75511607	75371119	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_75374192_75379336_75379474_75381071_75381202_75381948_75382078_75384641_75384713_75385901_75386035_75389591_75389688_75400204_75400298_75402971_75403059_75411010_75411104_75416875_75417034_75419340_75419425_75425360_75425500_75426370_75426479_75459064_75459182_75505981_75506117_75511111
H1_mix_00071028	chr5	-	4628	16	FSM	ENSG00000113163.19	ENST00000646511.1	3056	16	21	-1593	0	850	multi-exon	FALSE	canonical	3	112	junction_4	11.0915383163122	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATGAAATAATTTTAAACAA	0	True	NA	NA	False	NA	NA	NA	75511617	75376924	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_75379474_75381071_75381202_75381948_75382078_75384641_75384713_75385901_75386035_75389591_75389688_75400204_75400298_75402971_75403059_75411010_75411104_75416875_75417034_75419340_75419425_75425360_75425500_75426370_75426479_75459064_75459182_75505981_75506117_75511111
H1_mix_00071029	chr5	-	4576	17	FSM	ENSG00000113163.19	ENST00000643780.2	3868	17	363	-1071	0	1071	multi-exon	FALSE	canonical	3	15	junction_6	38.9326341261415	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGAATATAGCCTTACCC	751	False	NA	NA	False	ATTAAA	-36	NA	75511266	75376703	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_75379474_75381071_75381202_75381948_75382078_75384641_75384713_75385901_75386035_75389591_75389688_75399309_75399388_75400204_75400298_75402971_75403059_75411010_75411104_75416875_75417034_75419340_75419425_75425360_75425500_75426370_75426479_75459064_75459182_75505981_75506117_75511111
H1_mix_00071030	chr5	-	2111	12	FSM	ENSG00000152359.15	ENST00000428202.7	2185	12	0	74	0	4	multi-exon	FALSE	canonical	3	55	junction_2	12.7849343156133	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGACTTTATTTCTTTAAT	-27	True	NA	NA	False	ATTAAA	-8	NA	75717437	75674197	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_75674579_75677773_75677951_75685206_75685485_75689011_75689166_75690382_75690563_75692395_75692501_75694654_75694832_75702604_75702811_75705703_75705788_75707736_75707876_75712853_75712952_75717305
H1_mix_00071031	chr5	-	1676	10	NNC	ENSG00000152359.15	novel	896	7	NA	NA	-17	3565	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	20.5035377856699	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTACCGATTCTTTGC	NA	False	NA	-13	True	AATAAA	-13	NA	75717465	75686955	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_75687329_75689011_75689166_75690382_75690563_75692395_75692501_75694654_75694832_75702604_75702811_75705703_75705788_75707736_75707876_75712853_75712952_75717305
H1_mix_00071034	chr5	-	1278	1	FSM	ENSG00000254893.6	ENST00000506621.3	555	1	-171	-552	-171	552	mono-exon	FALSE	NA	NA	NA	NA	NA	230	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTGTATTTTTTTTT	2	True	NA	NA	False	NA	NA	NA	76174354	76173076	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_76173100_76174400
H1_mix_00071035	chr5	-	463	1	FSM	ENSG00000249014.2	ENST00000506772.2	381	1	13	-95	13	95	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTATTTTATTTTTTTT	NA	False	NA	NA	False	TATAAA	-18	NA	76242391	76241928	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_76241900_76242400
H1_mix_00071037	chr5	-	278	1	Intergenic	novelGene_1166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTCATCAGTTAAGGCGG	NA	False	NA	NA	False	NA	NA	NA	76363035	76362757	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_-_76362800_76363000
H1_mix_00071038	chr5	-	6069	3	FSM	ENSG00000132846.6	ENST00000255198.3	6134	3	102	-37	0	37	multi-exon	FALSE	canonical	3	27	junction_2	6	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCGTGGGCTTTTGGTCA	151	False	NA	NA	False	ATTAAA	-33	NA	77087183	77072034	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_77077896_77078593_77078729_77087110
H1_mix_00071041	chr5	-	2520	13	NIC	ENSG00000164253.14	novel	3678	13	NA	NA	3	0	intron_retention	FALSE	canonical	3	27	junction_12	88.0802979609452	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTACACATTAAAGATTGA	-2	True	NA	-32	True	AATGAA	-15	NA	77492484	77432243	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_77433288_77436260_77436395_77437335_77437425_77438239_77438362_77440812_77440998_77449759_77449871_77451290_77451354_77453816_77453929_77459061_77459125_77463094_77463227_77464760_77464810_77489456_77489558_77492169
H1_mix_00071043	chr5	-	949	10	FSM	ENSG00000164253.14	ENST00000509701.5	949	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	106.201183411602	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGATGGCAGTGTACGCA	22	True	NA	NA	False	NA	NA	NA	77492220	77437406	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_77437425_77438239_77438362_77440812_77440998_77449759_77449861_77453816_77453929_77459061_77459125_77463094_77463227_77464760_77464810_77489456_77489573_77492169
H1_mix_00071044	chr5	-	661	4	FSM	ENSG00000171530.15	ENST00000380377.9	661	4	0	0	0	0	multi-exon	FALSE	canonical	3	2054	junction_2	67.726574465928	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATAATCTGTTAGGTTCTA	4	True	NA	46	True	ATTAAA	-25	NA	77776339	77691165	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_77691499_77693265_77693353_77708241_77708348_77776204
H1_mix_00071045	chr5	-	2301	3	FSM	ENSG00000171530.15	ENST00000306388.10	2301	3	0	0	0	0	multi-exon	FALSE	canonical	3	2054	junction_1	67.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATTTTATACTTTAC	7	True	NA	-29	True	AATAAA	-19	NA	77776287	77691240	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_77693353_77708241_77708348_77776204
H1_mix_00071046	chr5	-	453	3	FSM	ENSG00000171530.15	ENST00000520361.5	446	3	0	-7	0	0	multi-exon	FALSE	canonical	3	7	junction_1	1091	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATTTTATACTTTAC	1	True	NA	-29	True	AATAAA	-19	NA	77776293	77691240	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_77691499_77708241_77708348_77776204
H1_mix_00071048	chr5	-	5783	27	FSM	ENSG00000132842.14	ENST00000255194.11	3980	27	0	-1803	0	1803	multi-exon	FALSE	canonical	3	222	junction_11	27.1193123178247	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTATTTGCAAACGTATGAA	-4	True	NA	NA	False	ATTAAA	-27	NA	78294698	78000522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_78003056_78015409_78015549_78020691_78020790_78034360_78034446_78039042_78039275_78089392_78089500_78100952_78101026_78110206_78110355_78113751_78113924_78116125_78116235_78128029_78128161_78129120_78129308_78141142_78141320_78156257_78156368_78162818_78162952_78165609_78165673_78175625_78175698_78175783_78175839_78177338_78177437_78181506_78181663_78216054_78216238_78225541_78225609_78227371_78227533_78228143_78228240_78240861_78240937_78267519_78267596_78294451
H1_mix_00071049	chr5	-	4794	2	FSM	ENSG00000245556.4	ENST00000665502.1	4624	2	-193	23	-102	-23	multi-exon	FALSE	canonical	3	58	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCTGAACTTATGACCTA	474	False	NA	NA	False	NA	NA	NA	78360609	78355587	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_78359986_78360213
H1_mix_00071050	chr5	-	5085	5	FSM	ENSG00000145685.14	ENST00000380345.7	4977	5	0	-108	0	93	multi-exon	FALSE	canonical	3	367	junction_2	10.280442597476	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAATATTGATGAATGGAAA	-21	True	NA	93	True	TTTAAA	-14	NA	78648772	78485121	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_78489154_78509783_78510399_78564812_78564872_78632263_78632369_78648498
H1_mix_00071051	chr5	-	4852	8	FSM	ENSG00000113273.17	ENST00000264914.10	4852	8	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_2	10.3430939199417	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCAATCATTGCCCTAAG	-10	True	NA	NA	False	AATAAA	-33	NA	78985310	78777208	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_78780663_78781851_78781975_78839355_78839427_78885583_78885828_78955294_78955503_78964415_78964607_78969005_78969193_78984936
H1_mix_00071053	chr5	-	1998	8	FSM	ENSG00000113273.17	ENST00000396151.7	2316	8	115	203	115	-203	multi-exon	FALSE	canonical	1	1	junction_7	54.9277819003261	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCTTACAGTAATATGGC	NA	False	NA	-12	True	AATAAA	-18	NA	78985972	78815713	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_78816115_78839355_78839427_78885583_78885828_78955294_78955503_78964415_78964607_78969005_78969193_78984936_78985559_78985898
H1_mix_00071054	chr5	-	1159	3	FSM	ENSG00000113273.17	ENST00000521800.2	1159	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	57	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTCTTTTGTTATGTCTT	NA	False	NA	NA	False	AATAAA	-23	NA	78955374	78884293	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_78885129_78885583_78885828_78955294
H1_mix_00071055	chr5	-	801	1	FSM	ENSG00000213757.3	ENST00000474167.1	787	1	37	-51	37	51	mono-exon	FALSE	NA	NA	NA	NA	NA	3395	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAATAAAATAAAAAAAT	62	False	NA	NA	False	AATAAA	-23	NA	79284881	79284080	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_79284100_79284900
H1_mix_00071058	chr5	-	7935	9	FSM	ENSG00000177034.17	ENST00000512528.3	7931	9	-4	0	-4	0	multi-exon	FALSE	canonical	3	21	junction_2	27.9463772249642	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCGATTTAATGTTATTT	-13	True	NA	-10	True	AATAAA	-29	NA	79991266	79976715	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_79983795_79985570_79985660_79986949_79987108_79988238_79988316_79988461_79988645_79989151_79989245_79990159_79990237_79990593_79990664_79991157
H1_mix_00071063	chr5	-	6448	12	FSM	ENSG00000164300.17	ENST00000507668.7	6448	12	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_3	15.2581098880357	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGATGTTTTGAAATATGT	15	True	NA	-4	True	AATAAA	-24	NA	80256048	80138726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_80143811_80146089_80146235_80147244_80147285_80150881_80150949_80158835_80158963_80166382_80166479_80169334_80169547_80174953_80175048_80177314_80177398_80177885_80178065_80202885_80203054_80255895
H1_mix_00071066	chr5	-	970	1	FSM	ENSG00000248569.1	ENST00000514280.1	936	1	-18	-16	-18	16	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGTGAGACCCCACCCGG	-5	False	NA	NA	False	NA	NA	NA	80351974	80351004	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_80351000_80352000
H1_mix_00071067	chr5	-	961	1	FSM	ENSG00000220157.4	ENST00000515379.1	961	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	310	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTAGGAAACAAAGCTTA	NA	False	NA	NA	False	NA	NA	NA	80360040	80359079	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_80359100_80360000
H1_mix_00071071	chr5	-	3949	6	FSM	ENSG00000228716.7	ENST00000439211.7	3919	6	0	-30	0	30	multi-exon	FALSE	canonical	3	787	junction_1	47.848092960953	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACACAAAATTTCAAAGAAAC	-4	True	NA	30	True	NA	NA	NA	80654983	80626195	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_80629166_80633876_80633993_80637882_80638010_80649388_80649495_80654007_80654058_80654403
H1_mix_00071075	chr5	-	686	2	FSM	ENSG00000247572.9	ENST00000512287.1	601	2	17	-102	0	102	multi-exon	FALSE	canonical	3	12	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGACATCCTAGAATGTGA	50	False	NA	77	True	NA	NA	NA	81301506	81235656	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_81236123_81301286
H1_mix_00071077	chr5	-	2062	2	FSM	ENSG00000247572.9	ENST00000660242.1	2020	2	-24	-18	-7	18	multi-exon	FALSE	canonical	3	30	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGATTTCTAGGCTCCA	-10	True	NA	-16	True	AGTAAA	-35	NA	81301530	81237542	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_81239361_81301286
H1_mix_00071079	chr5	-	9182	17	FSM	ENSG00000145687.17	ENST00000320672.9	8841	17	-156	-185	0	185	multi-exon	TRUE	canonical	3	145	junction_14	17.7935205903722	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAGGAGGAGGAGGGTC	9648	False	NA	NA	False	AATAAA	-44	NA	81751253	81412618	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_81420534_81428584_81428684_81437429_81437459_81440557_81440637_81442652_81442724_81446867_81446923_81448789_81448826_81461054_81461104_81466973_81467042_81473699_81473771_81474495_81474563_81489249_81489310_81513627_81513718_81615472_81615558_81636556_81636619_81650266_81650340_81750980
H1_mix_00071080	chr5	-	1790	16	FSM	ENSG00000145687.17	ENST00000514493.5	1790	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	48.5502717694648	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTATCCTGTGAATCACAA	9651	False	NA	-21	True	AATAAA	-42	NA	81751250	81419917	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_81420534_81428584_81428684_81437429_81437459_81440557_81440637_81442652_81442724_81446867_81446923_81448789_81448826_81461054_81461104_81466973_81467042_81473699_81473771_81474495_81474563_81489249_81489310_81615472_81615558_81636556_81636619_81650266_81650340_81750980
H1_mix_00071085	chr5	-	856	2	Genic_Genomic	ENSG00000251495.1	novel	493	1	NA	NA	-117	63163	multi-exon	FALSE	non_canonical	0	0	junction_1	0	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCATAGTGGAAGACAAAGA	NA	False	NA	NA	False	AAAAAG	-10	NA	82010211	81946438	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr5_-_81946470_82009386
H1_mix_00071086	chr5	-	493	1	FSM	ENSG00000251495.1	ENST00000510729.1	493	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAAGTTTGACTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	82010094	82009601	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_82009600_82010100
H1_mix_00071087	chr5	-	3252	4	FSM	ENSG00000186468.13	ENST00000296674.13	3252	4	0	0	0	0	multi-exon	FALSE	canonical	3	9445	junction_3	1326.67278055543	1200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGAGAGGTTTTGTCTGC	2	True	NA	-7	True	AATAAA	-17	NA	82278354	82273319	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_82276256_82276397_82276519_82277692_82277853_82278319
H1_mix_00071089	chr5	-	836	3	FSM	ENSG00000186468.13	ENST00000507980.1	836	3	0	0	0	0	multi-exon	FALSE	canonical	3	9445	junction_2	1550.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTCATCCTGTGGAATAA	2	True	NA	-89	True	NA	NA	NA	82278354	82275877	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_82276519_82277692_82277853_82278319
H1_mix_00071090	chr5	-	576	3	FSM	ENSG00000186468.13	ENST00000504293.5	576	3	0	0	0	0	multi-exon	FALSE	canonical	3	11837	junction_1	354.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTATCTTACTGTCCC	677	False	NA	-18	True	AATAAA	-19	NA	82277951	82276059	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_82276256_82276397_82276519_82277692
H1_mix_00071094	chr5	-	596	3	FSM	ENSG00000174695.10	ENST00000504622.5	596	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	918	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATCTTTATAGAATGAGA	NA	False	NA	-84	True	NA	NA	NA	83077453	83056726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_83057155_83061876_83061912_83077320
H1_mix_00071098	chr5	-	4825	11	FSM	ENSG00000164176.13	ENST00000296591.10	4814	11	0	-11	0	11	multi-exon	FALSE	canonical	3	100	junction_9	64.6857016658241	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGTGAATGCCCACTAC	1	True	NA	-2	True	ATTAAA	-28	NA	84384880	83940542	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_83943569_83963204_83963361_84060299_84060485_84064699_84064845_84066450_84066607_84106648_84106831_84137240_84137355_84180392_84180522_84229854_84229885_84254083_84254213_84384307
H1_mix_00071099	chr5	-	4244	10	FSM	ENSG00000164176.13	ENST00000380138.3	4244	10	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_8	34.5960819875443	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGATTCTTTTGAAGCAGT	-4	True	NA	-13	True	AATAAA	-13	NA	84384386	83940599	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_83943569_83963204_83963361_84060299_84060485_84064699_84064845_84066450_84066607_84106648_84106831_84137240_84137355_84180392_84180522_84254083_84254213_84384307
H1_mix_00071100	chr5	-	651	1	FSM	ENSG00000242477.1	ENST00000486625.1	651	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATAAACTCTATTACCAG	26	False	NA	NA	False	NA	NA	NA	86884881	86884230	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_86884200_86884900
H1_mix_00071102	chr5	-	1497	9	FSM	ENSG00000134480.16	ENST00000504878.1	1497	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	124.285709154351	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGAATAGCACCTGTTTT	-3	True	NA	-11	True	AATAAA	-15	NA	87412904	87394273	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_87394485_87395043_87395105_87399393_87399506_87401701_87401773_87404843_87405008_87407975_87408187_87409289_87409364_87411223_87411347_87412434
H1_mix_00071104	chr5	-	2894	11	NIC	ENSG00000164180.14	novel	2750	12	NA	NA	-4	235	combination_of_known_junctions	TRUE	canonical	3	14	junction_8	19.3814344154399	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTAAGAGGCTGTCTTTA	-16	True	NA	NA	False	AATAAA	-24	NA	88268852	88194811	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_88196489_88197668_88197766_88198975_88199151_88202961_88203076_88205813_88205955_88206438_88206500_88207028_88207181_88220562_88220720_88228444_88228529_88240812_88240917_88268720
H1_mix_00071105	chr5	-	2750	12	FSM	ENSG00000164180.14	ENST00000296595.11	2750	12	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	10.7218784588313	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAATAGGACTTGTTTTA	-9	True	NA	NA	False	NA	NA	NA	88268845	88195046	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_88196489_88197668_88197766_88198975_88199151_88202961_88203076_88205813_88205955_88206438_88206500_88207028_88207181_88220562_88220720_88225768_88225867_88228444_88228529_88240812_88240917_88268720
H1_mix_00071106	chr5	-	2328	10	FSM	ENSG00000164180.14	ENST00000506536.5	2328	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	31.0093574089109	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGAGTAAGCAATTTATT	14	True	NA	-12	True	ATTAAA	-18	NA	88268822	88195206	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_88196489_88198975_88199151_88202961_88203076_88205813_88205955_88206438_88206500_88207028_88207143_88220562_88220720_88225768_88225867_88228444_88228529_88268720
H1_mix_00071109	chr5	-	2402	5	FSM	ENSG00000153140.9	ENST00000283122.8	2406	5	0	4	0	-4	multi-exon	FALSE	canonical	3	532	junction_1	34.1275182221034	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGTTTTGTGAGTCTTCT	0	True	NA	NA	False	AATAAA	-15	NA	90409756	90392260	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_90394108_90399357_90399550_90405684_90405800_90407698_90407835_90409644
H1_mix_00071110	chr5	-	7627	4	FSM	ENSG00000153140.9	ENST00000522565.5	867	4	-25	-6735	-16	-55	multi-exon	FALSE	canonical	3	543	junction_1	33.6551135292494	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAATATATTGATTTCCA	-26	True	NA	NA	False	ATTAAA	-42	NA	90409782	90392311	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_90399550_90405684_90405800_90407698_90407835_90409644
H1_mix_00071111	chr5	-	2455	6	FSM	ENSG00000153140.9	ENST00000522083.5	1026	6	0	-1429	0	-24	multi-exon	FALSE	canonical	3	18	junction_1	272.410425644835	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAACAGTAAAAGTAAA	-1	True	NA	NA	False	AATATA	-22	NA	90409757	90392280	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_90394108_90396492_90396565_90399357_90399550_90405684_90405800_90407698_90407835_90409644
H1_mix_00071113	chr5	-	715	3	FSM	ENSG00000153140.9	ENST00000522842.1	664	3	9	-60	0	60	multi-exon	FALSE	canonical	3	556	junction_1	32	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCTGCTGTTTGGAAAAT	-1	True	NA	NA	False	AATAAA	-14	NA	90409757	90405333	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_90405800_90407698_90407835_90409644
H1_mix_00071114	chr5	-	4287	2	FSM	ENSG00000176055.10	ENST00000316610.7	4277	2	0	-10	0	10	multi-exon	FALSE	canonical	3	22	junction_1	0	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTGATATTTTTATAACA	4	True	NA	-22	True	AATAAA	-25	NA	90474771	90458198	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_90461553_90473838
H1_mix_00071115	chr5	-	4516	3	FSM	ENSG00000176018.13	ENST00000315948.11	4262	3	23	-277	0	262	multi-exon	FALSE	canonical	3	224	junction_1	4	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACCTGCTCTCTTTATAT	-3	True	NA	NA	False	NA	NA	NA	90529561	90515348	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_90519485_90525034_90525301_90529447
H1_mix_00071116	chr5	-	4508	3	FSM	ENSG00000176018.13	ENST00000509384.5	1538	3	-28	-2942	-28	262	multi-exon	FALSE	canonical	3	28	junction_1	102	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACCTGCTCTCTTTATAT	4	True	NA	NA	False	NA	NA	NA	90529612	90515348	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_90519426_90525034_90525301_90529447
H1_mix_00071118	chr5	-	2985	2	FSM	ENSG00000113369.9	ENST00000511391.1	821	2	-33	-2131	-33	-36	multi-exon	FALSE	canonical	3	97	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACATTAAATTAAACTATTAA	9862	False	NA	56	True	NA	NA	NA	91373878	91368666	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_91371457_91373683
H1_mix_00071119	chr5	-	4203	8	FSM	ENSG00000113369.9	ENST00000265138.4	4239	8	0	36	0	-36	multi-exon	TRUE	canonical	3	77	junction_4	15.2569823426548	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACATTAAATTAAACTATTAA	-7	True	NA	56	True	NA	NA	NA	91383317	91368666	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_91371457_91373683_91373839_91374113_91374277_91374921_91375179_91375510_91375614_91376620_91376769_91378693_91378776_91382812
H1_mix_00071120	chr5	-	591	2	FSM	ENSG00000237187.9	ENST00000607195.1	591	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAATGGAAAAGTATATTC	NA	False	NA	-16	True	AATAAA	-4	NA	93422423	93411032	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_93411510_93422309
H1_mix_00071121	chr5	-	4619	10	FSM	ENSG00000284336.1_ENSG00000113391.19	ENST00000509163.5	1369	10	-3	-3247	-3	43	multi-exon	FALSE	canonical	3	28	junction_9	11.8112731252607	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATGTACTGTGTTCGAT	-25	True	NA	NA	False	NA	NA	NA	94111679	93617681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_93621130_93776158_93776244_93784382_93784500_93824147_93824268_93881469_93881689_93958776_93958969_93964457_93964524_94050730_94050832_94053125_94053228_94111510
H1_mix_00071122	chr5	-	4684	11	FSM	ENSG00000113391.19	ENST00000395965.8	4684	11	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_10	10.3266645147405	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGTGAGTTTAAGTTGC	-9	True	NA	NA	False	AATAAA	-18	NA	94111663	93617724	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_93621130_93776158_93776244_93784382_93784500_93824147_93824268_93881469_93881689_93958776_93958969_93964457_93964524_94050730_94050832_94053125_94053228_94074645_94074770_94111510
H1_mix_00071123	chr5	-	830	1	FSM	ENSG00000249353.2	ENST00000502784.2	830	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAATAGTTTAAACAATT	148	False	NA	NA	False	NA	NA	NA	93683667	93682837	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_93682800_93683700
H1_mix_00071124	chr5	-	2242	1	FSM	ENSG00000251023.1	ENST00000505668.1	3157	1	231	684	231	-684	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTCAAATAAGTTAGCAG	NA	False	NA	NA	False	NA	NA	NA	93863594	93861352	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_93861400_93863600
H1_mix_00071125	chr5	-	1979	1	Genic_Genomic	ENSG00000185261.15	novel	NA	NA	NA	NA	324378	23	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACCAAACACTATTATAGA	11	False	NA	23	True	TATAAA	-41	NA	94152806	94150827	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr5_-_94150800_94152800
H1_mix_00071127	chr5	-	917	5	FSM	ENSG00000198677.12	ENST00000502768.1	917	5	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_3	14.3243673507768	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTGAGACAAGTTCAGT	NA	False	NA	NA	False	AAAAAG	-28	NA	95495479	95482593	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_95482632_95484723_95484846_95490907_95491037_95494681_95494794_95494963
H1_mix_00071129	chr5	-	884	4	FSM	ENSG00000198677.12	ENST00000506007.1	884	4	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_3	13.1233464566864	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTCGAATTAAAGAACT	NA	False	NA	NA	False	NA	NA	NA	95516768	95513131	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_95513646_95514854_95514924_95516352_95516410_95516524
H1_mix_00071131	chr5	-	600	4	FSM	ENSG00000250240.6	ENST00000512486.5	809	4	211	-2	203	2	multi-exon	TRUE	canonical	1	1	junction_1	0.942809041582063	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGACTGAGCCTGCTT	9	True	NA	NA	False	NA	NA	NA	95732084	95701246	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_95701372_95708634_95708836_95719643_95719774_95731940
H1_mix_00071132	chr5	-	4017	2	FSM	ENSG00000173221.14	ENST00000507412.1	3407	2	-395	-215	-395	85	multi-exon	FALSE	canonical	3	298	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATAACAGTCTTTTTCA	3049	False	NA	73	True	AATAAA	-34	NA	95819897	95813763	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_95814390_95816506
H1_mix_00071139	chr5	-	5106	14	FSM	ENSG00000175426.11	ENST00000311106.8	5136	14	0	30	0	-30	multi-exon	FALSE	canonical	2	4	junction_8	3.22527004511333	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAAAGCTCATGTTT	-11	True	NA	NA	False	AATAAA	-20	NA	96433248	96390362	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_96393379_96394863_96395026_96397335_96397470_96398878_96399037_96399952_96400187_96408222_96408324_96410773_96410987_96412317_96412491_96416032_96416122_96421879_96421957_96423312_96423460_96425819_96425931_96429212_96429318_96432862
H1_mix_00071140	chr5	-	5089	19	FSM	ENSG00000164307.13	ENST00000443439.7	4841	19	-248	0	-93	0	multi-exon	FALSE	canonical	3	27	junction_5	7.48001452431415	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATATTTGCAATTATTT	5920	False	NA	-4	True	AATAAA	-21	NA	96808193	96774483	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_96776552_96780422_96780505_96781057_96781199_96781692_96781855_96783050_96783236_96783923_96784081_96785787_96785972_96786469_96786550_96788530_96788686_96790295_96790368_96790511_96790644_96792060_96792193_96793399_96793514_96793802_96793958_96795041_96795163_96797174_96797310_96800861_96801001_96803402_96803944_96807859
H1_mix_00071142	chr5	-	3909	10	FSM	ENSG00000058729.11	ENST00000283109.8	3909	10	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_4	24.5029602645965	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGGTTTATATTTGTGCTA	1	True	NA	-1	True	AATAAA	-17	NA	97183247	97160866	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_97163226_97165050_97165148_97167466_97167992_97168759_97168853_97171205_97171398_97173174_97173264_97177115_97177292_97177731_97177849_97179054_97179194_97183125
H1_mix_00071144	chr5	-	8149	36	FSM	ENSG00000153922.11	ENST00000614616.5	8145	36	0	-4	0	4	multi-exon	FALSE	canonical	3	195	junction_28	26.5430570498392	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCTGTTTGCTTATAAAG	-5	True	NA	NA	False	AATAAA	-20	NA	98929007	98853980	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_98856726_98858179_98858391_98858963_98859016_98859971_98860069_98863407_98863587_98868494_98868636_98869753_98869883_98870686_98870804_98872050_98872202_98872416_98872556_98873592_98873724_98875071_98875114_98876397_98876559_98879551_98879729_98881075_98881172_98881278_98881376_98881974_98882124_98883087_98883238_98885577_98885650_98888087_98888241_98889075_98889239_98892524_98892714_98893415_98893607_98894596_98894687_98896225_98896443_98897192_98897321_98898255_98898435_98898663_98898765_98899479_98899706_98900810_98901083_98901185_98901336_98902899_98902965_98903791_98903909_98904896_98905099_98926333_98926535_98928538
H1_mix_00071145	chr5	-	2955	9	FSM	ENSG00000153922.11	ENST00000514344.5	2955	9	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_4	26.9696009425427	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGGGCTCCTGTAATTT	NA	False	NA	-15	True	ATTAAA	-15	NA	98872557	98855203	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_98856726_98858179_98858391_98858963_98859016_98859971_98860069_98863407_98863587_98868494_98868636_98869753_98869883_98870686_98870804_98872050
H1_mix_00071146	chr5	-	786	2	FSM	ENSG00000153922.11	ENST00000513064.1	786	2	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAAAAGTACACCGGAGCA	9659	False	NA	NA	False	NA	NA	NA	98858664	98856424	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_98856726_98858179
H1_mix_00071150	chr5	-	957	4	Intergenic	novelGene_1178	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	13.0724477007517	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATATATTCCCTAGCT	NA	False	NA	NA	False	AATGAA	-2	NA	101317689	101128627	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_-_101129229_101245792_101245880_101267118_101267229_101317530
H1_mix_00071158	chr5	-	934	2	FSM	ENSG00000112874.10	ENST00000508889.1	934	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGCATATAGCTAATTT	0	True	NA	NA	False	AATAAA	-40	NA	103562790	103559404	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_103560251_103562702
H1_mix_00071160	chr5	-	3631	2	NIC	ENSG00000251027.2	novel	602	3	NA	NA	-3177	-2	combination_of_known_splicesites	FALSE	canonical	2	11	junction_1	0	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGAATGGCTTTTGAGA	NA	False	NA	-2	True	ATTAAA	-18	NA	106984046	106815198	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_106815547_106980763
H1_mix_00071163	chr5	-	5372	5	FSM	ENSG00000184349.14	ENST00000333274.11	5372	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	4.03112887414927	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGATCCCTCCTTCTACTT	-13	True	NA	-16	True	AATAAA	-25	NA	107670937	107376893	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_107381377_107387234_107387316_107387705_107387772_107427216_107427510_107670488
H1_mix_00071164	chr5	-	5159	9	FSM	ENSG00000145743.18	ENST00000542267.7	5198	9	36	3	36	-3	multi-exon	FALSE	canonical	1	4	junction_2	4.92442890089805	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACACTGTGTCTTTTGTTT	5	True	NA	NA	False	AATAAA	-10	NA	108382062	107859037	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_107861861_107881036_107881180_108020924_108021002_108186116_108186248_108224120_108224229_108348398_108348531_108364737_108364996_108367830_108367954_108380698
H1_mix_00071165	chr5	-	470	1	FSM	ENSG00000272523.1	ENST00000606054.1	436	1	-36	2	-36	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	226	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACCAATCATTGCTCTTT	-10	True	NA	-13	True	ATTAAA	-17	NA	108728296	108727826	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_108727800_108728300
H1_mix_00071166	chr5	-	925	1	FSM	ENSG00000176857.5	ENST00000511478.1	1143	1	119	99	119	-99	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACATGAACTACAGCCACT	320	False	NA	NA	False	NA	NA	NA	109052338	109051413	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_109051400_109052300
H1_mix_00071167	chr5	-	4869	10	FSM	ENSG00000198961.10	ENST00000361189.7	4856	10	0	-13	0	4	multi-exon	FALSE	canonical	3	339	junction_6	20.15556780595	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATTGTGTAATTGTATC	-7	True	NA	-5	True	AATAAA	-30	NA	109409974	109334708	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_109337357_109344189_109344312_109344704_109344820_109355914_109356027_109362839_109363023_109368560_109368747_109378203_109379255_109381502_109381704_109383402_109383521_109409841
H1_mix_00071170	chr5	-	4649	6	FSM	ENSG00000164211.13	ENST00000296632.8	4631	6	0	-18	0	18	multi-exon	FALSE	canonical	3	208	junction_1	31.3087847097264	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTAATTTAACATTAAGT	-19	True	NA	18	True	AATAAA	-40	NA	111512535	111496014	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_111500107_111501001_111501117_111501961_111502089_111506329_111506380_111507328_111507443_111512384
H1_mix_00071171	chr5	-	5423	4	FSM	ENSG00000164211.13	ENST00000509887.5	1186	4	-24	-4213	3	0	multi-exon	FALSE	canonical	3	39	junction_1	118.575807913007	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTCATTGATATTATCTT	2	True	NA	0	True	AATAAA	-22	NA	111512559	111496032	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_111501117_111506329_111506380_111507328_111507443_111512384
H1_mix_00071172	chr5	-	5489	4	FSM	ENSG00000164211.13	ENST00000511569.5	981	4	-27	-4481	0	50	multi-exon	FALSE	canonical	3	31	junction_3	117.178875608571	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATGCCTGAATTTAAAGT	-1	True	NA	50	True	NA	NA	NA	111512562	111495982	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_111501117_111501961_111502089_111506329_111506380_111512384
H1_mix_00071175	chr5	-	1454	5	FSM	ENSG00000164211.13	ENST00000502322.5	1467	5	13	0	13	0	multi-exon	FALSE	canonical	3	276	junction_2	6.28490254498827	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCTATTAATAGTGCTA	466	False	NA	NA	False	TTTAAA	-44	NA	111512577	111500146	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_111501117_111501961_111502089_111506329_111506380_111507328_111507443_111512384
H1_mix_00071177	chr5	-	2581	5	FSM	ENSG00000134986.14	ENST00000379671.7	2581	5	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_4	555.901969775247	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAGTCATTAAGGCTTA	11	True	NA	NA	False	GATAAA	-15	NA	111757724	111728811	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_111731047_111735429_111735508_111755769_111755831_111757135_111757180_111757561
H1_mix_00071178	chr5	-	2365	3	FSM	ENSG00000134986.14	ENST00000447165.6	2304	3	-61	0	-61	0	multi-exon	FALSE	canonical	3	1758	junction_2	106	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTGATTTGGCTCATCA	1756	False	NA	-14	True	AATAAA	-20	NA	111756312	111729302	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_111731047_111735429_111735508_111755769
H1_mix_00071179	chr5	-	1942	4	FSM	ENSG00000134986.14	ENST00000257435.12	1942	4	0	0	0	0	multi-exon	FALSE	canonical	3	1610	junction_3	147.741516018875	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTGATTTGGCTCATCA	-6	True	NA	-14	True	AATAAA	-20	NA	111757194	111729302	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_111731047_111735429_111735508_111755769_111755831_111757135
H1_mix_00071180	chr5	-	2111	5	FSM	ENSG00000134986.14	ENST00000446294.6	2065	5	-1053	1007	-305	194	multi-exon	FALSE	canonical	3	137	junction_4	722.569503577338	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGAGTTATTTTTTATT	NA	False	NA	5	True	NA	NA	NA	111758523	111730322	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_111731047_111735429_111735508_111755769_111755831_111757135_111757180_111757319
H1_mix_00071181	chr5	-	577	3	FSM	ENSG00000134986.14	ENST00000507742.5	577	3	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	940	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAACTCAAACTCCCACCG	839	False	NA	NA	False	NA	NA	NA	111757229	111730641	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_111731047_111735429_111735508_111757135
H1_mix_00071183	chr5	-	698	5	FSM	ENSG00000134986.14	ENST00000455559.6	698	5	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_4	708.93630708266	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGCCTTGCTTTAGAGAA	NA	False	NA	-32	True	AAGAAA	-11	NA	111758218	111730805	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_111731047_111735429_111735508_111755769_111755831_111757135_111757180_111757944
H1_mix_00071189	chr5	-	5074	23	FSM	ENSG00000129595.14	ENST00000261486.6	4670	23	-404	0	-368	0	multi-exon	FALSE	canonical	3	11	junction_14	3.96054925650763	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTATTTGTCGTTTCCTGC	744	False	NA	-1	True	AATAAA	-20	NA	112419681	112162618	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_112165119_112168738_112168821_112168994_112169106_112170300_112170370_112170944_112170993_112184015_112184136_112194567_112194646_112195660_112195709_112204374_112204489_112205420_112205505_112209891_112209983_112234633_112234756_112239659_112239738_112240718_112240811_112259228_112259293_112259890_112259980_112262493_112262582_112264895_112265017_112266232_112266331_112275325_112275405_112280271_112280324_112307385_112307491_112418940
H1_mix_00071193	chr5	-	670	2	FSM	ENSG00000171444.18	ENST00000511242.1	744	2	87	-13	87	13	multi-exon	FALSE	canonical	3	16	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCGTTATGTGTTTTTTA	90	False	NA	NA	False	NA	NA	NA	113488736	113448109	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_113448288_113488244
H1_mix_00071194	chr5	-	4180	10	FSM	ENSG00000152503.10	ENST00000513154.6	4156	10	0	-24	0	14	multi-exon	FALSE	canonical	3	48	junction_4	9.46337971105226	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGATCTGCATTCCAGGA	-3	True	NA	-1	True	AATAAA	-28	NA	115169908	115124747	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_115126858_115130591_115130890_115133859_115134148_115136999_115137125_115137362_115137617_115141278_115141375_115144597_115144745_115147068_115147395_115163517_115163753_115169607
H1_mix_00071198	chr5	-	639	2	FSM	ENSG00000152503.10	ENST00000379617.2	1322	2	267	416	-120	-416	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTTGAGACTGACTTGC	1	True	NA	NA	False	NA	NA	NA	115180279	115177538	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_115177873_115179974
H1_mix_00071199	chr5	-	9550	9	FSM	ENSG00000164219.10	ENST00000419445.6	9550	9	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_5	23.5411873107539	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTTCTCAAATGGATTTC	-8	True	NA	-9	True	AATAAA	-22	NA	115262877	115204011	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_115212584_115216864_115216974_115221823_115222009_115230975_115231022_115236389_115236523_115237857_115238010_115241538_115241607_115253136_115253256_115262711
H1_mix_00071201	chr5	-	2387	10	FSM	ENSG00000164221.13	ENST00000379611.10	2387	10	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_3	31.927386750114	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTGGCTAATGCAGTT	-7	True	NA	-5	True	TATAAA	-19	NA	115296654	115267189	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_115267919_115268881_115269001_115269702_115269799_115271212_115271627_115275215_115275607_115275993_115276070_115276964_115277055_115279646_115279769_115284786_115284909_115296426
H1_mix_00071204	chr5	-	3959	4	FSM	ENSG00000251201.8	ENST00000282382.8	3491	4	-20	-448	-20	448	multi-exon	FALSE	canonical	2	16	junction_1	156.718431164514	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTGCTGAATTATTATA	0	True	NA	NA	False	NA	NA	NA	115626181	115578193	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_115581198_115616317_115616446_115620434_115620681_115625600
H1_mix_00071205	chr5	-	3626	4	FSM	ENSG00000251201.8	ENST00000333314.3	3453	4	-171	-2	-24	2	multi-exon	FALSE	canonical	3	7	junction_1	160.91198422326	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTGACTAAACTTGTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	115626185	115578648	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_115581316_115616317_115616446_115620434_115620681_115625600
H1_mix_00071206	chr5	-	6649	3	FSM	ENSG00000134970.14	ENST00000456936.4	3918	3	-143	-2588	-143	2588	multi-exon	FALSE	canonical	3	315	junction_1	29.5	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAGGTAATACCTAACTT	2	True	NA	NA	False	NA	NA	NA	115626179	115610621	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_115616446_115620434_115620681_115625600
H1_mix_00071207	chr5	-	4101	4	NNC	ENSG00000134970.14	novel	3918	3	NA	NA	-1732	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	156.718431164514	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTGTATCAGTGTTTT	NA	False	NA	-1	True	AGTAAA	-22	NA	115634724	115613209	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_115616446_115620434_115620681_115625600_115625983_115634487
H1_mix_00071210	chr5	-	4045	4	FSM	ENSG00000145782.13	ENST00000509910.2	4040	4	0	-5	0	5	multi-exon	FALSE	canonical	3	651	junction_3	46.9420446460905	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTTCTTGGAGTCACT	1	True	NA	NA	False	AATAAA	-22	NA	115841565	115828194	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_115831864_115832601_115832665_115837627_115837765_115841389
H1_mix_00071211	chr5	-	5543	2	FSM	ENSG00000145782.13	ENST00000505252.1	3274	2	-80	-2189	-80	48	multi-exon	FALSE	canonical	3	677	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGATTTTCAGATTTGAA	7398	False	NA	NA	False	AATAAA	-45	NA	115834432	115828151	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_115831864_115832601
H1_mix_00071214	chr5	-	521	1	FSM	ENSG00000185641.6	ENST00000469891.2	373	1	-55	-93	-55	93	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCCACAAAAAGCAGAATTT	-5	True	NA	NA	False	AATAAA	-29	NA	116052344	116051823	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_116051800_116052300
H1_mix_00071216	chr5	-	6829	19	FSM	ENSG00000092421.17	ENST00000343348.11	6828	19	0	-1	0	1	multi-exon	FALSE	canonical	3	654	junction_2	44.9518260659861	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTGTCCTGAATGCTT	-2	True	NA	-1	True	AATAAA	-21	NA	116574823	116443553	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_116447812_116467582_116467748_116473072_116473094_116475544_116475604_116477845_116477927_116478013_116478155_116478541_116478719_116480121_116480278_116482443_116482576_116486748_116486967_116488107_116488197_116488887_116489008_116491739_116491831_116495412_116495515_116496250_116496314_116497326_116497388_116502209_116502328_116504844_116504983_116574184
H1_mix_00071217	chr5	-	4221	2	FSM	ENSG00000092421.17	ENST00000513137.5	3640	2	-197	-384	-197	0	multi-exon	FALSE	canonical	3	695	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGGAGCTGGAATTCTG	9005	False	NA	-20	True	AATAAA	-15	NA	116469741	116445749	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_116447812_116467582
H1_mix_00071218	chr5	-	557	2	FSM	ENSG00000092421.17	ENST00000514316.1	572	2	0	15	0	-15	multi-exon	FALSE	canonical	3	720	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGTTTGTTTCACCGCC	NA	False	NA	NA	False	NA	NA	NA	116480240	116478280	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_116478719_116480121
H1_mix_00071220	chr5	-	5787	6	NNC	ENSG00000169570.10	novel	5776	6	NA	NA	35834	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_5	21.4569336113062	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGCCTCAGGATTATTT	NA	False	NA	0	True	ATTAAA	-25	NA	118952386	118836073	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_118841088_118848089_118848219_118928536_118928730_118939195_118939291_118944558_118944650_118952121
H1_mix_00071225	chr5	-	443	1	FSM	ENSG00000263432.2	ENST00000577215.2	297	1	-149	3	-149	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAAAACT	832	False	NA	NA	False	NA	NA	NA	123022932	123022489	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_123022500_123022900
H1_mix_00071226	chr5	-	1364	5	FSM	ENSG00000168938.6	ENST00000306442.5	1364	5	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_4	18.2277261335582	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATGCCCATCCACATC	-23	True	NA	NA	False	TATAAA	-31	NA	123036725	123023249	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_123024004_123025783_123025969_123028774_123028869_123029304_123029419_123036508
H1_mix_00071231	chr5	-	374	4	NNC	ENSG00000253807.6	novel	650	4	NA	NA	177359	2164	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11.7851130197758	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTAAAGCTTTGCAAATT	NA	False	NA	NA	False	ATTAAA	-15	NA	124137320	124057629	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_124057647_124059793_124059949_124062417_124062511_124137211
H1_mix_00071232	chr5	-	1537	6	FSM	ENSG00000168916.16	ENST00000513985.5	1539	6	0	2	0	0	multi-exon	FALSE	canonical	3	32	junction_1	44.2013574452188	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTCTTGTCTGTCTCAT	NA	False	NA	14	True	ATTAAA	-23	NA	124644337	124636914	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_124637907_124638781_124638824_124639132_124639215_124641251_124641406_124643510_124643684_124644243
H1_mix_00071234	chr5	-	6593	11	NIC	ENSG00000168916.16	novel	6152	10	NA	NA	-399	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_10	38.4598491936721	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTCTTGTCTGTCTCAT	1798	False	NA	14	True	ATTAAA	-23	NA	124747038	124636914	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_124637907_124638781_124638824_124639132_124639215_124641251_124641406_124643510_124643684_124644243_124644662_124646678_124649134_124649609_124649698_124701013_124701270_124744083_124745173_124746194
H1_mix_00071235	chr5	-	5966	10	NIC	ENSG00000168916.16	novel	6152	10	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_9	30.1248431172597	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTCTTGTCTGTCTCAT	45	False	NA	14	True	ATTAAA	-23	NA	124748791	124636914	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_124637907_124639132_124639215_124641251_124641406_124643510_124643684_124644243_124644662_124646678_124649134_124649609_124649698_124701013_124701270_124744083_124745173_124748532
H1_mix_00071237	chr5	-	4804	18	FSM	ENSG00000164904.18	ENST00000409134.8	4765	18	1	-40	0	40	multi-exon	FALSE	canonical	3	671	junction_12	66.4047565728671	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTACACTGCATTCTTA	-12	True	NA	38	True	NA	NA	NA	126595218	126541800	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_126545020_126546323_126546400_126549928_126550003_126550195_126550294_126552020_126552138_126554286_126554394_126555930_126556016_126559239_126559335_126561082_126561125_126568258_126568357_126570781_126570860_126575419_126575465_126577078_126577212_126582850_126582975_126583931_126584013_126592663_126592730_126593350_126593405_126595006
H1_mix_00071238	chr5	-	5855	9	FSM	ENSG00000164904.18	ENST00000497231.7	2255	9	-684	-2916	-684	0	multi-exon	FALSE	canonical	3	711	junction_4	68.046744044076	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGACAATTGGGTTGTCCT	NA	False	NA	-2	True	AATAAA	-20	NA	126563106	126541840	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_126545020_126546323_126546400_126549928_126550003_126550195_126550294_126552020_126552138_126554286_126554394_126555930_126556016_126559239_126559335_126561082
H1_mix_00071239	chr5	-	1382	10	FSM	ENSG00000164904.18	ENST00000413020.6	1126	10	-99	-157	19	157	multi-exon	FALSE	canonical	3	25	junction_1	224.857046494044	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAACAGAGTGAGACTCT	6015	False	NA	NA	False	NA	NA	NA	126595317	126564200	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_126564593_126568258_126568357_126570781_126570860_126575419_126575465_126577078_126577212_126582850_126582975_126583931_126584013_126592663_126592730_126593350_126593405_126595006
H1_mix_00071241	chr5	-	3947	5	FSM	ENSG00000173926.6	ENST00000308660.6	3946	5	0	-1	0	1	multi-exon	FALSE	canonical	3	36	junction_2	9.28372231381357	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATTTGTCTTTCATTGT	5	True	NA	NA	False	AATAAA	-21	NA	127030558	126867712	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_126870792_126878184_126878395_126914929_126915135_126917983_126918228_127030349
H1_mix_00071242	chr5	-	1430	2	FSM	ENSG00000173926.6	ENST00000515241.1	719	2	-711	0	-711	0	multi-exon	FALSE	canonical	3	61	junction_1	0	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCAGTTTAGAGACTTGA	NA	False	NA	NA	False	AATAAA	-17	NA	126918939	126914660	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_126915135_126917983
H1_mix_00071243	chr5	-	2318	4	FSM	ENSG00000245937.9	ENST00000514409.6	2318	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8.25967446224258	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACTCGGGAGGCTGAGGC	-6	True	NA	NA	False	AATACA	-40	NA	128083097	127939249	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_127941221_127956803_127956922_128061143_128061245_128082969
H1_mix_00071244	chr5	-	3229	3	FSM	ENSG00000245937.9	ENST00000668567.1	3209	3	0	-20	0	20	multi-exon	FALSE	canonical	2	3	junction_1	10.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCTTTGGAAATGAAACTT	1450	False	NA	NA	False	AATAAA	-14	NA	128083131	128021567	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_128024299_128061143_128061245_128082734
H1_mix_00071246	chr5	-	1686	9	FSM	ENSG00000138829.12	ENST00000507835.5	1884	9	130	68	130	-68	multi-exon	FALSE	canonical	3	75	junction_8	14.7091595613074	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTCCAAGAAAAAGAATTTG	176	False	NA	NA	False	NA	NA	NA	128339061	128328137	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_128328822_128330572_128330696_128332911_128333035_128334718_128334845_128335169_128335296_128335454_128335578_128335987_128336114_128337996_128338123_128338932
H1_mix_00071249	chr5	-	852	3	FSM	ENSG00000169567.13	ENST00000304043.10	852	3	0	0	0	0	multi-exon	FALSE	canonical	3	4893	junction_1	180	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACATAGGAAATTGACCA	25	True	NA	NA	False	NA	NA	NA	131165256	131159026	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_131159612_131162571_131162677_131165094
H1_mix_00071250	chr5	-	1033	5	FSM	ENSG00000169567.13	ENST00000511475.6	1032	5	0	-1	0	1	multi-exon	FALSE	canonical	3	19	junction_2	2259.67612447005	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGAGTGTTGCGTTTGAT	NA	False	NA	-7	True	AATAAA	-27	NA	131165349	131159283	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_131159612_131160655_131160885_131162361_131162478_131162571_131162677_131165094
H1_mix_00071251	chr5	-	3529	3	FSM	ENSG00000169567.13	ENST00000675491.1	3527	3	0	-2	0	0	multi-exon	FALSE	canonical	3	64	junction_1	2594.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATAGTCTCTCTGAGTGT	NA	False	NA	-17	True	AATAAA	-17	NA	131165334	131159293	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_131162478_131162571_131162677_131165094
H1_mix_00071252	chr5	-	3630	2	FSM	ENSG00000169567.13	ENST00000506908.2	3628	2	0	-2	0	0	multi-exon	FALSE	canonical	3	5253	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATAGTCTCTCTGAGTGT	NA	False	NA	-17	True	AATAAA	-17	NA	131165341	131159293	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_131162677_131165094
H1_mix_00071253	chr5	-	8361	28	FSM	ENSG00000158987.22	ENST00000509018.6	8350	28	0	-11	0	11	multi-exon	FALSE	canonical	3	31	junction_9	9.54492661798199	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAATTATAAATGTATGGA	-16	True	NA	1	True	AATAAA	-25	NA	131635229	131423909	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_131427292_131428901_131429217_131430858_131431350_131433429_131433659_131439580_131439716_131442348_131442538_131446482_131446704_131453053_131453178_131455800_131456013_131461704_131462089_131464040_131464282_131472586_131472745_131479512_131479754_131489545_131489655_131492581_131492786_131495552_131495661_131498442_131498608_131504625_131504779_131505363_131505523_131508070_131508208_131510313_131510492_131521389_131521522_131548046_131548191_131561977_131562048_131592382_131592467_131603270_131603328_131604622_131604694_131634961
H1_mix_00071258	chr5	-	2388	16	NIC	ENSG00000072682.20	novel	2230	16	NA	NA	30	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_15	24.6192336734243	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTTACTTGGAGTATTT	-1	True	NA	-8	True	AATAAA	-24	NA	132227764	132192609	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_132193081_132194925_132195023_132195411_132195481_132198205_132198272_132198878_132198933_132203747_132203848_132204081_132204153_132207707_132207885_132209137_132209332_132210283_132210524_132213915_132214054_132217196_132217349_132217751_132217849_132218544_132218645_132227085_132227222_132227538
H1_mix_00071259	chr5	-	2223	16	FSM	ENSG00000072682.20	ENST00000379086.5	2223	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_15	22.7091758253501	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTTACTTGGAGTATTT	23	True	NA	-8	True	AATAAA	-24	NA	132227819	132192609	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_132193081_132194925_132195023_132195411_132195481_132198320_132198381_132198878_132198933_132203747_132203848_132204081_132204153_132207707_132207885_132209137_132209332_132210283_132210524_132213915_132214054_132217196_132217349_132217751_132217849_132218544_132218645_132227085_132227259_132227789
H1_mix_00071260	chr5	-	2048	2	FSM	ENSG00000233006.8	ENST00000666504.1	2447	2	158	241	103	-241	multi-exon	FALSE	canonical	1	3	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGACTGCCCTGTATTG	2369	False	NA	NA	False	NA	NA	NA	132369545	132364862	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_132366782_132369416
H1_mix_00071261	chr5	-	3554	10	FSM	ENSG00000125347.15	ENST00000245414.9	3554	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	6.51494009523069	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGGTCAGTGGTTACCA	20	True	NA	NA	False	AATAAA	-18	NA	132490773	132481608	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_132484076_132484361_132484498_132485666_132485717_132486250_132486374_132486556_132486687_132486794_132486845_132486953_132487131_132487925_132488026_132489391_132489484_132490544
H1_mix_00071262	chr5	-	1881	10	FSM	ENSG00000125347.15	ENST00000405885.6	2061	10	180	0	180	0	multi-exon	FALSE	canonical	2	2	junction_9	8.23872218307406	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGGGTGTGGCCTTTTTA	8225	False	NA	-31	True	AGTAAA	-8	NA	132490082	132483085	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_132484076_132484361_132484498_132485666_132485717_132486250_132486374_132486556_132486687_132486794_132486845_132486953_132487131_132487925_132488026_132489391_132489484_132490049
H1_mix_00071263	chr5	-	6261	17	FSM	ENSG00000131437.16	ENST00000378746.8	6325	17	61	3	-5	0	multi-exon	FALSE	canonical	3	19	junction_8	9.38894795757224	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGTAGTAGTGGTCTGC	-27	True	NA	-7	True	AATAAA	-15	NA	132737577	132692630	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_132696683_132699170_132699296_132700215_132700285_132700646_132700701_132702086_132702213_132702557_132702669_132702884_132703066_132703462_132703620_132710958_132711058_132715756_132715932_132716244_132716443_132716844_132716985_132720608_132720715_132726127_132726213_132726353_132726499_132734204_132734479_132737413
H1_mix_00071264	chr5	-	6265	18	FSM	ENSG00000131437.16	ENST00000378735.5	3266	18	0	-2999	0	0	multi-exon	FALSE	canonical	0	0	junction_9	16.0261464564072	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGTAGTAGTGGTCTGC	-22	True	NA	-7	True	AATAAA	-15	NA	132737572	132692630	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_132696683_132699170_132699296_132700215_132700285_132700646_132700701_132702086_132702213_132702557_132702669_132702884_132703066_132703462_132703620_132706450_132706460_132710958_132711058_132715756_132715932_132716244_132716443_132716844_132716985_132720608_132720715_132726127_132726213_132726353_132726499_132734204_132734479_132737413
H1_mix_00071266	chr5	-	6165	9	ISM	ENSG00000164402.14	ENST00000378721.8	1723	10	17	1822	0	0	5prime_fragment	FALSE	canonical	0	0	junction_6	64.6625857818878	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGGTGTCTTTTTTGGG	-1	True	NA	-2	True	ATTAAA	-21	NA	132777221	132756000	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_132760993_132761132_132761266_132761457_132761627_132761799_132761897_132762483_132762646_132763705_132763887_132764223_132764420_132765408_132765530_132777107
H1_mix_00071267	chr5	-	4394	10	FSM	ENSG00000164402.14	ENST00000296873.11	4394	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	61.2717081712451	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGGTGTCTTTTTTGGG	2659	False	NA	-2	True	ATTAAA	-21	NA	132777421	132756000	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_132758825_132760801_132760993_132761132_132761266_132761457_132761627_132761799_132761897_132762483_132762646_132763705_132763893_132764223_132764420_132765408_132765530_132777107
H1_mix_00071268	chr5	-	4356	10	NIC	ENSG00000164402.14	novel	4394	10	NA	NA	-17	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	61.2717081712451	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTGGTGTCTTTTTT	12	True	NA	-5	True	ATTAAA	-18	NA	132777392	132756003	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_132758825_132760801_132760993_132761132_132761266_132761457_132761627_132761799_132761897_132762483_132762646_132763705_132763887_132764223_132764420_132765408_132765530_132777107
H1_mix_00071273	chr5	-	9536	21	FSM	ENSG00000072364.13	ENST00000265343.10	9536	21	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_11	5.64446631666803	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACTGAACACTGTACTCT	-3	True	NA	-32	True	AATAAA	-26	NA	132963634	132875394	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_132881187_132883339_132883561_132885075_132885120_132886309_132886404_132887520_132887593_132887845_132887983_132888096_132888161_132889078_132889174_132892163_132892405_132893029_132893119_132896322_132897241_132898229_132898393_132899103_132899142_132899586_132899642_132902441_132902488_132904367_132904405_132927120_132927208_132932177_132932223_132934146_132934942_132937066_132937194_132963258
H1_mix_00071275	chr5	-	2193	5	FSM	ENSG00000155329.12	ENST00000509437.6	2189	5	0	-4	0	4	multi-exon	FALSE	canonical	3	124	junction_3	108.331378187485	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTATCTCTTTAGTGTTTT	6	True	NA	0	True	AATAAA	-33	NA	133026549	132996980	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_132998851_133000131_133000174_133006758_133006921_133022840_133022907_133026496
H1_mix_00071276	chr5	-	2173	4	FSM	ENSG00000155329.12	ENST00000509008.1	608	4	-22	-1543	0	0	multi-exon	FALSE	canonical	3	69	junction_2	133.389987963448	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTTATCTCTTTAGTG	-16	True	NA	-4	True	AATAAA	-29	NA	133026571	132996984	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_132998851_133000131_133000202_133006758_133006921_133026496
H1_mix_00071277	chr5	-	2171	4	FSM	ENSG00000155329.12	ENST00000324170.7	2178	4	7	0	7	0	multi-exon	FALSE	canonical	3	293	junction_3	40.4310112001501	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTTATCTCTTTAGTG	NA	False	NA	-4	True	AATAAA	-29	NA	133026597	132996984	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_132998851_133000131_133000174_133006758_133006921_133026496
H1_mix_00071279	chr5	-	328	3	FSM	ENSG00000155329.12	ENST00000504170.2	325	3	0	-3	0	3	multi-exon	FALSE	canonical	3	140	junction_1	39.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGGTGGATATTTTTAA	NA	False	NA	-2	True	AATAAA	-16	NA	133026589	133019034	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_133019204_133022840_133022907_133026496
H1_mix_00071280	chr5	-	857	1	FSM	ENSG00000286408.1	ENST00000665702.1	829	1	-53	25	-53	-25	mono-exon	FALSE	NA	NA	NA	NA	NA	292	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGAATCTCCAAGTCTCT	NA	False	NA	-23	True	AATAAA	-24	NA	133051946	133051089	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_133051100_133051900
H1_mix_00071281	chr5	-	5384	16	FSM	ENSG00000053108.17	ENST00000265342.12	5396	16	12	0	12	0	multi-exon	FALSE	canonical	1	3	junction_14	2.8095076674274	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGATAGTTTTTTTTTTCC	6	True	NA	NA	False	AATAAA	-17	NA	133612529	133196454	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_133199798_133201932_133202043_133210190_133210299_133217228_133217379_133220747_133220867_133224189_133224217_133225149_133225285_133225657_133225820_133233416_133233538_133249409_133249577_133312653_133312778_133316458_133316653_133400737_133400987_133567185_133567220_133603857_133603994_133612324
H1_mix_00071283	chr5	-	635	2	FSM	ENSG00000113583.8	ENST00000507191.1	635	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGCTGTTGTTTACATT	116	False	NA	NA	False	NA	NA	NA	133968674	133959534	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_133960021_133968525
H1_mix_00071284	chr5	-	1851	9	FSM	ENSG00000213585.11	ENST00000265333.8	1839	9	0	-12	0	12	multi-exon	FALSE	canonical	2	18	junction_8	640.418405712234	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTTGTCTTCATGCTC	-23	True	NA	-3	True	AATAAA	-29	NA	134004975	133971858	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_133972863_133973790_133973849_133975870_133976022_133980728_133980957_133990854_133990908_133991001_133991155_133992305_133992356_133992945_133993019_134004894
H1_mix_00071291	chr5	-	696	5	FSM	ENSG00000113558.19	ENST00000519321.5	692	5	0	-4	0	0	multi-exon	FALSE	canonical	2	9	junction_4	3112.25451843194	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTACTGAAGAGGAGGAAG	2	True	NA	7	True	NA	NA	NA	134176950	134158479	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_134158596_134160986_134161131_134167169_134167244_134173925_134174023_134176685
H1_mix_00071294	chr5	-	574	2	FSM	ENSG00000113575.10	ENST00000472253.1	574	2	0	0	0	0	multi-exon	FALSE	canonical	3	1539	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCCATATAAAAATACAAAGC	NA	False	NA	NA	False	NA	NA	NA	134199450	134197635	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_134197845_134199085
H1_mix_00071296	chr5	-	1228	3	FSM	ENSG00000237190.4	ENST00000458198.3	1228	3	0	0	0	0	multi-exon	FALSE	canonical	3	803	junction_1	18.5	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGGCAGGTAATTAATTT	-4	True	NA	-58	True	AATAAA	-38	NA	134411881	134402064	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_134402927_134409902_134410003_134411615
H1_mix_00071297	chr5	-	800	2	FSM	ENSG00000237190.4	ENST00000395009.3	800	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGTATCTGAGAATATCT	-4	True	NA	-6	True	AATAAA	-17	NA	134411881	134410548	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_134411083_134411615
H1_mix_00071298	chr5	-	6339	5	FSM	ENSG00000152700.14	ENST00000509730.5	506	5	0	-5833	0	-5	multi-exon	FALSE	canonical	3	26	junction_4	80.3336791140553	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACTCTAGTGTCAAGTT	NA	False	NA	-8	True	AATAAA	-18	NA	134613137	134601153	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_134607067_134608371_134608504_134609570_134609675_134612690_134612757_134613013
H1_mix_00071299	chr5	-	6520	7	FSM	ENSG00000152700.14	ENST00000402673.7	6517	7	0	-3	0	3	multi-exon	FALSE	canonical	3	186	junction_4	15.140086598901	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGTCAAGTTCCATTTTT	14	False	134632842	0	True	AATAAA	-26	NA	134632828	134601145	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_134607067_134608371_134608504_134609570_134609675_134612690_134612757_134620932_134621053_134623961_134624038_134632727
H1_mix_00071300	chr5	-	692	2	FSM	ENSG00000152700.14	ENST00000504242.1	676	2	0	-16	0	16	multi-exon	FALSE	canonical	3	9	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCCTCTATATTACTAAG	-4	True	NA	NA	False	ATTAAA	-31	NA	134632809	134631585	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_134632196_134632727
H1_mix_00071302	chr5	-	1657	1	FSM	ENSG00000247627.2	ENST00000498999.2	1377	1	-290	10	-290	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	1646	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCCTCCTGTAAATATA	NA	False	NA	NA	False	NA	NA	NA	134928326	134926669	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_134926700_134928300
H1_mix_00071305	chr5	-	2789	9	FSM	ENSG00000113648.17	ENST00000511689.6	1917	9	-391	-481	262	481	multi-exon	FALSE	canonical	3	436	junction_5	200.878033580081	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGTGCGTGGAGCTTTC	369	False	NA	NA	False	NA	NA	NA	135399622	135333899	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_135335142_135343259_135343435_135345967_135346058_135352945_135353046_135360496_135360608_135369405_135369604_135370035_135370143_135388921_135389127_135399061
H1_mix_00071306	chr5	-	1882	9	NIC	ENSG00000113648.17	novel	1917	9	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	3	579	junction_5	168.125697024577	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGACTGGTGTGTTCC	-4	True	NA	-8	True	AGTAAA	-13	NA	135399200	135334381	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_135335142_135343259_135343435_135345967_135346058_135352945_135353046_135360496_135360605_135369405_135369604_135370035_135370143_135388921_135389127_135399061
H1_mix_00071307	chr5	-	1859	9	FSM	ENSG00000113648.17	ENST00000312469.8	1859	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	404.788660136373	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGATTTAGTAAAATGT	780	False	NA	-1	True	NA	NA	NA	135399211	135334409	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_135335142_135343259_135343435_135345967_135346058_135350822_135350914_135360496_135360608_135369405_135369604_135370035_135370143_135388921_135389127_135399061
H1_mix_00071310	chr5	-	972	6	NIC	ENSG00000113648.17	novel	775	5	NA	NA	7	-3	combination_of_known_junctions	FALSE	canonical	3	132	junction_1	368.619261569441	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTTAATCTGTGTTTAGT	-1	True	NA	-8	True	ATTAAA	-19	NA	135399197	135359724	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_135359943_135360496_135360605_135369405_135369604_135370035_135370143_135388921_135389127_135399061
H1_mix_00071311	chr5	-	992	6	NIC	ENSG00000113648.17	novel	775	5	NA	NA	3	-8	combination_of_known_junctions	FALSE	canonical	3	132	junction_1	387.530850384844	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTCCAAGTTAATCTGTGT	10	True	NA	-13	True	ATTAAA	-14	NA	135399219	135359729	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_135359943_135360496_135360608_135369405_135369604_135370035_135370143_135388921_135389127_135399061
H1_mix_00071312	chr5	-	1712	4	FSM	ENSG00000145824.13	ENST00000512158.6	1687	4	-29	4	-29	0	multi-exon	FALSE	canonical	3	61	junction_2	1.24721912892465	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTCTAGACTGCCACCT	552	False	NA	-1	True	AATAAA	-19	NA	135579020	135570682	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_135571869_135574571_135574686_135578433_135578540_135578714
H1_mix_00071313	chr5	-	632	2	Antisense	novelGene_ENSG00000145832.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTTGTGGTCT	NA	False	NA	NA	False	AATAAA	-18	NA	135737278	135731038	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr5_-_135731334_135736941
H1_mix_00071315	chr5	-	833	3	Intergenic	novelGene_1206	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_1	0.5	308	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	NA	False	NA	-3	True	AATAAA	-16	NA	136570886	136565381	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_-_136565798_136568549_136568729_136570648
H1_mix_00071317	chr5	-	4824	11	FSM	ENSG00000152377.14	ENST00000394945.6	4824	11	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_10	16.2114157308978	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGAGTGTTTGTATTTC	-12	True	NA	-3	True	AATAAA	-18	NA	137499326	136975297	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_136978845_136979331_136979470_136985139_136985203_136988421_136988644_136992483_136992601_137067714_137067830_137112434_137112562_137140579_137140695_137267009_137267056_137498372_137498559_137499178
H1_mix_00071318	chr5	-	6703	14	NIC	ENSG00000146021.15	novel	6805	15	NA	NA	12	12	intron_retention	FALSE	canonical	3	9	junction_4	10.1841041005756	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATTTCTATAGTCCAGT	6	True	NA	1	True	AATAAA	-29	NA	137736077	137617487	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_137622127_137625752_137625897_137628296_137628438_137634036_137634166_137638952_137639151_137639859_137639978_137658130_137658281_137661914_137662032_137677544_137677655_137692284_137692448_137698286_137698409_137709749_137709857_137720464_137720585_137735632
H1_mix_00071319	chr5	-	6805	15	FSM	ENSG00000146021.15	ENST00000309755.9	6805	15	12	-12	12	12	multi-exon	FALSE	canonical	3	11	junction_4	10.0033157768118	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATTTCTATAGTCCAGT	6	True	NA	1	True	AATAAA	-29	NA	137736077	137617487	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_137622127_137625752_137625897_137628296_137628438_137634036_137634166_137637293_137637396_137638952_137639151_137639859_137639978_137658130_137658281_137661914_137662032_137677544_137677655_137692284_137692448_137698286_137698409_137709749_137709857_137720464_137720585_137735632
H1_mix_00071320	chr5	-	7601	3	FSM	ENSG00000146021.15	ENST00000447439.6	2697	3	-1141	-3763	-1141	42	multi-exon	FALSE	canonical	3	27	junction_1	5.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTCTCAAACATGAAAAGGA	NA	False	NA	31	True	NA	NA	NA	137631084	137617457	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_137622127_137625752_137625897_137628296
H1_mix_00071321	chr5	-	8620	1	FSM	ENSG00000177733.7	ENST00000314940.7	8713	1	-32	125	-32	-125	mono-exon	FALSE	NA	NA	NA	NA	NA	591	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGAGAGATCCTAAAGAAG	NA	False	NA	NA	False	TATAAA	-28	NA	137754395	137745775	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_137745800_137754400
H1_mix_00071323	chr5	-	5098	22	NIC	ENSG00000031003.11	novel	5465	23	NA	NA	13000	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_21	4.94229742679205	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTAAATGTATGTTTGT	NA	False	NA	-24	True	AATAAA	-21	NA	138019928	137937957	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_137940349_137941943_137942046_137942874_137943039_137943132_137943217_137945901_137945998_137946227_137946312_137948954_137949185_137952627_137952710_137953335_137953466_137954165_137954377_137959615_137959764_137960165_137960215_137962404_137962470_137985256_137985390_137987460_137987617_137988273_137988316_138006989_138007148_138011007_138011150_138011767_138011946_138018301_138018515_138018954_138019147_138019880
H1_mix_00071324	chr5	-	582	2	FSM	ENSG00000031003.11	ENST00000510804.1	582	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACCTTATTTTTGTAAAC	5722	False	NA	NA	False	NA	NA	NA	138032928	138020762	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138021198_138032781
H1_mix_00071325	chr5	-	1209	6	FSM	ENSG00000112981.5	ENST00000265191.4	1208	6	2	-3	2	3	multi-exon	FALSE	canonical	3	16	junction_5	5.08330601085553	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGTAATTTTTTGGTAC	-19	True	NA	-3	True	AATAAA	-20	NA	138139426	138115171	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138115765_138118817_138118937_138128478_138128580_138129262_138129469_138138651_138138786_138139370
H1_mix_00071327	chr5	-	755	4	FSM	ENSG00000112983.18	ENST00000472478.6	745	4	0	-10	0	10	multi-exon	FALSE	canonical	3	7	junction_2	230.845306548683	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTGTGTGTGTGTGT	6684	False	NA	10	True	AATAAA	-29	NA	138160129	138156871	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138157268_138157641_138157895_138159554_138159600_138160068
H1_mix_00071328	chr5	-	3015	21	FSM	ENSG00000112983.18	ENST00000454473.5	3005	21	0	-10	0	10	multi-exon	FALSE	canonical	3	41	junction_11	223.499099550759	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTGTGTGTGTGTGT	363	False	NA	10	True	AATAAA	-29	NA	138178599	138156871	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138157268_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138166517_138166611_138167933_138168079_138168469_138168689_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
H1_mix_00071329	chr5	-	3208	22	FSM	ENSG00000112983.18	ENST00000230901.9	3198	22	0	-10	0	10	multi-exon	FALSE	canonical	3	194	junction_12	201.778970248307	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTGTGTGTGTGTGT	-1	True	NA	10	True	AATAAA	-29	NA	138178630	138156871	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138157268_138159554_138159600_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138166517_138166728_138167933_138168079_138168469_138168689_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
H1_mix_00071330	chr5	-	2992	21	FSM	ENSG00000112983.18	ENST00000402931.5	2982	21	0	-10	0	10	multi-exon	FALSE	canonical	3	159	junction_13	207.671230554451	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTGTGTGTGTGTGT	-4	True	NA	10	True	AATAAA	-29	NA	138178633	138156871	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138157268_138159554_138159600_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138166517_138166728_138167933_138168079_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
H1_mix_00071331	chr5	-	2565	16	NIC	ENSG00000112983.18	novel	3198	22	NA	NA	11	-5	combination_of_known_junctions	FALSE	canonical	3	95	junction_11	231.703795585849	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGCCTTTGGCTTGTTCTG	8093	False	NA	-5	True	AATAAA	-14	NA	138170869	138156886	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_138157268_138159554_138159600_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138167933_138168079_138168469_138168689_138169221_138169359_138170344_138170410_138170831
H1_mix_00071332	chr5	-	2992	20	FSM	ENSG00000112983.18	ENST00000411594.6	2967	20	0	-25	0	10	multi-exon	FALSE	canonical	3	95	junction_10	223.548701988325	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTGTGTGTGTGTGT	293	False	NA	10	True	AATAAA	-29	NA	138178669	138156871	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138157268_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138167933_138168079_138168469_138168689_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
H1_mix_00071333	chr5	-	3105	20	NIC	ENSG00000112983.18	novel	2982	21	NA	NA	-18	-5	combination_of_known_junctions	FALSE	canonical	3	95	junction_11	222.220187279079	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGCCTTTGGCTTGTTCTG	-9	True	NA	-5	True	AATAAA	-14	NA	138178971	138156886	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_138157268_138159554_138159600_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138167933_138168079_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
H1_mix_00071334	chr5	-	3256	23	NNC	ENSG00000112983.18	novel	3198	22	NA	NA	2	7	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_13	248.125701281354	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTAGCCTTTGGCTTGTT	-7	True	NA	-8	True	AATAAA	-11	NA	138178636	138156889	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_138157268_138157641_138157819_138159554_138159600_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138166517_138166611_138167933_138168079_138168469_138168689_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
H1_mix_00071335	chr5	-	3443	21	NIC	ENSG00000112983.18	novel	3198	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	194	junction_11	209.182360633013	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTGTATACAATAAACTGAA	9	True	NA	-33	True	TTTAAA	-25	NA	138178953	138156914	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_138157268_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138166517_138166728_138167933_138168079_138168469_138168689_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
H1_mix_00071343	chr5	-	3133	16	FSM	ENSG00000094880.11	ENST00000394886.7	3133	16	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_7	38.1325174737899	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTTAATATAACTGTTT	4	True	NA	46	True	AATAAA	-16	NA	138213323	138187649	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138189149_138189632_138189753_138189827_138189907_138191473_138191536_138191861_138191938_138192268_138192389_138192503_138192658_138198198_138198281_138198425_138198524_138198604_138198783_138201106_138201240_138201342_138201449_138202112_138202156_138206546_138206685_138212990_138213064_138213151
H1_mix_00071345	chr5	-	1310	3	FSM	ENSG00000094880.11	ENST00000464806.1	562	3	-342	-406	-342	406	multi-exon	FALSE	canonical	3	356	junction_2	11.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGGGCACTGAGTACCCT	NA	False	NA	NA	False	AAGAAA	-34	NA	138190449	138188580	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138189149_138189632_138189753_138189827
H1_mix_00071346	chr5	-	1079	3	FSM	ENSG00000094880.11	ENST00000394884.7	1079	3	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_2	36.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGCTTTGAGTGTCATT	-16	True	NA	0	True	AATAAA	-21	NA	138213343	138205870	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138206685_138212990_138213064_138213151
H1_mix_00071348	chr5	-	1928	11	NIC	ENSG00000158402.21	novel	2093	14	NA	NA	26	15	combination_of_known_junctions	FALSE	canonical	3	43	junction_8	93.7405461900025	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGCCTGCTCCTAGAAGAT	-1	True	NA	-4	True	AATAAA	-31	NA	138331843	138285253	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_138285842_138286021_138286134_138286496_138286631_138287168_138287268_138289500_138289564_138290638_138290741_138291969_138292117_138319218_138319375_138328483_138328530_138330986_138331219_138331594
H1_mix_00071349	chr5	-	2089	14	NIC	ENSG00000158402.21	novel	2137	16	NA	NA	0	10	combination_of_known_junctions	FALSE	canonical	3	141	junction_13	50.4139081026012	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCTAGCCTGCTCCTAG	8	True	NA	-9	True	AATAAA	-26	NA	138331794	138285258	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_138285842_138286021_138286134_138286496_138286631_138287168_138287268_138289500_138289564_138290638_138290741_138291969_138292117_138319218_138319375_138325814_138325905_138326020_138326055_138328483_138328530_138329552_138329648_138330986_138331215_138331594
H1_mix_00071350	chr5	-	2108	14	FSM	ENSG00000158402.21	ENST00000323760.11	2093	14	0	-15	0	15	multi-exon	FALSE	canonical	3	131	junction_13	51.7369312886993	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGCCTGCTCCTAGAAGAT	-2	True	NA	-4	True	AATAAA	-31	NA	138331804	138285253	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138285842_138286021_138286134_138286496_138286631_138287168_138287268_138289500_138289564_138290638_138290741_138291969_138292117_138319218_138319375_138325814_138325905_138326020_138326055_138328483_138328530_138329552_138329648_138330986_138331219_138331594
H1_mix_00071351	chr5	-	1969	13	NIC	ENSG00000158402.21	novel	2093	14	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_5	77.6900447647931	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGATTGTGAGCCTAGC	20	True	NA	-19	True	AATAAA	-16	NA	138331782	138285268	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_138285842_138286021_138286134_138286496_138286631_138287168_138287268_138289500_138289564_138291969_138292117_138319218_138319375_138325814_138325905_138326020_138326055_138328483_138328530_138329552_138329648_138330986_138331219_138331594
H1_mix_00071352	chr5	-	3874	11	FSM	ENSG00000120705.13	ENST00000499810.6	3874	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	220.295165630115	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTGTGTGCTTGAGATT	-6	True	NA	NA	False	ATTAAA	-16	NA	138543229	138506094	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138508388_138508668_138508817_138510564_138510630_138511044_138511201_138511474_138511605_138512763_138512955_138513567_138513707_138517560_138517701_138518691_138518868_138542633_138542937_138543096
H1_mix_00071353	chr5	-	3682	11	FSM	ENSG00000120705.13	ENST00000360541.10	3682	11	0	0	0	0	multi-exon	FALSE	canonical	3	554	junction_10	75.1998005316504	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTGTGTGCTTGAGATT	-13	True	NA	NA	False	ATTAAA	-16	NA	138543236	138506094	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138508388_138508668_138508817_138510564_138510630_138511044_138511201_138511474_138511605_138512763_138512955_138513567_138513707_138517560_138517701_138518691_138518868_138542832_138542937_138543096
H1_mix_00071354	chr5	-	933	4	FSM	ENSG00000120705.13	ENST00000506345.5	933	4	0	0	0	0	multi-exon	FALSE	canonical	3	709	junction_1	43.7899024382968	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGTCTATGAAAATCTGG	NA	False	NA	NA	False	ACTAAA	-31	NA	138517662	138511103	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138511605_138512763_138512955_138513567_138513707_138517560
H1_mix_00071355	chr5	-	4395	17	FSM	ENSG00000113013.16	ENST00000297185.9	4404	17	0	9	0	-9	multi-exon	TRUE	canonical	3	2438	junction_5	139.256606104522	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGCAAAAAGAAATGATTGG	-10	True	NA	NA	False	CATAAA	-16	NA	138575401	138553764	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138556115_138556451_138556593_138556773_138556867_138557401_138557497_138557868_138557987_138558552_138558658_138559863_138560092_138561579_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574127_138575237
H1_mix_00071356	chr5	-	4439	17	FSM	ENSG00000113013.16	ENST00000677988.1	4449	17	0	10	0	-10	multi-exon	FALSE	canonical	1	44	junction_16	650.885934707457	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGCAAAAAGAAATGATTG	-12	True	NA	NA	False	CATAAA	-15	NA	138575403	138553765	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138556115_138556451_138556593_138556773_138556867_138557401_138557497_138557868_138557987_138558552_138558658_138559863_138560092_138561579_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574170_138575237
H1_mix_00071357	chr5	-	664	4	FSM	ENSG00000113013.16	ENST00000506477.5	664	4	0	0	0	0	multi-exon	FALSE	canonical	3	2673	junction_3	70.9240595441506	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTCATTTTTGGCCA	-20	True	NA	NA	False	NA	NA	NA	138575411	138570798	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138571142_138573762_138573851_138574067_138574127_138575237
H1_mix_00071358	chr5	-	560	2	FSM	ENSG00000253404.1	ENST00000520838.1	587	2	35	-8	35	8	multi-exon	FALSE	canonical	3	5	junction_1	0	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCAGACCCGTCTTTGGC	10	True	NA	-5	True	AATAAA	-23	NA	138753274	138744425	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138744763_138753051
H1_mix_00071359	chr5	-	1889	10	FSM	ENSG00000120725.13	ENST00000394817.7	1889	10	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_6	13.8973307677818	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGCTTCACACTAGTGCT	-2	True	NA	NA	False	ATTAAA	-17	NA	139198368	138946723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138947474_138951170_138951336_138951787_138951885_139021170_139021293_139026800_139026993_139042619_139042720_139050937_139051047_139121034_139121174_139127738_139127854_139198268
H1_mix_00071360	chr5	-	909	6	FSM	ENSG00000170469.11	ENST00000302091.9	909	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	23.013039781828	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCACCCCACTCCCAGTG	-2	True	NA	-10	True	TATAAA	-22	NA	139404088	139396562	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_139396956_139397040_139397144_139401754_139401826_139401914_139402046_139402627_139402694_139403943
H1_mix_00071361	chr5	-	680	6	FSM	ENSG00000170469.11	ENST00000450845.7	680	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	19.2208220427743	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCAGCCTCTGCCTTCTC	-3	True	NA	-5	True	AATAAA	-33	NA	139404089	139396766	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_139396930_139397040_139397144_139401754_139401826_139401914_139402046_139402627_139402694_139403943
H1_mix_00071362	chr5	-	647	4	FSM	ENSG00000170469.11	ENST00000451821.6	646	4	0	-1	0	1	multi-exon	FALSE	canonical	3	48	junction_2	4.32049379893857	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTTCTTAGTCCACCTT	19	False	NA	-2	True	CATAAA	-35	NA	139404067	139401499	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_139401826_139401914_139402046_139402627_139402694_139403943
H1_mix_00071363	chr5	-	5077	8	FSM	ENSG00000170464.10	ENST00000302060.10	5102	8	25	0	1	0	multi-exon	FALSE	canonical	3	166	junction_1	11.9146625497103	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTACTTTTCCTTGGTTC	9	True	NA	-8	True	ATTAAA	-20	NA	139439500	139410202	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_139414273_139420052_139420226_139422707_139422818_139425004_139425115_139426171_139426358_139428537_139428684_139437371_139437559_139439405
H1_mix_00071364	chr5	-	451	2	FSM	ENSG00000170464.10	ENST00000510770.1	476	2	25	0	25	0	multi-exon	FALSE	canonical	3	166	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACTTTACTATTTGCTAA	NA	False	NA	-9	True	AATACA	-17	NA	139420285	139414054	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_139414273_139420052
H1_mix_00071367	chr5	-	2754	1	FSM	ENSG00000275506.1	ENST00000619270.1	362	1	-1566	-826	-1566	826	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGAAAACTTGTCATCTA	NA	False	NA	NA	False	NA	NA	NA	139613929	139611175	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_139611200_139613900
H1_mix_00071370	chr5	-	1961	9	ISM	ENSG00000158458.21	ENST00000340391.8	2025	10	16966	-107	-15709	107	3prime_fragment	FALSE	canonical	3	9	junction_8	3.55096817783545	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTCTATAAAAGGAAAAAAGT	NA	False	NA	NA	False	AATAAA	-13	NA	139887512	139847809	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_139848698_139851603_139851832_139852431_139852560_139852903_139853028_139855675_139855779_139865548_139865626_139871720_139871842_139880855_139880975_139887339
H1_mix_00071372	chr5	-	1325	4	FSM	ENSG00000113068.10	ENST00000261813.9	1336	4	0	11	0	-11	multi-exon	FALSE	canonical	3	596	junction_3	54.3098108591399	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTCTATCTGTGCACTG	-5	True	NA	3	True	AATAAA	-42	NA	140303101	140245045	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_140246058_140281448_140281534_140300415_140300583_140303040
H1_mix_00071373	chr5	-	1091	3	FSM	ENSG00000113068.10	ENST00000510217.1	1091	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	342.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATTTGCAAATTATGTT	-17	True	NA	-76	True	NA	NA	NA	140303113	140245124	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_140246058_140281448_140281534_140303040
H1_mix_00071374	chr5	-	675	3	FSM	ENSG00000113068.10	ENST00000507185.1	787	3	0	112	0	-112	multi-exon	FALSE	canonical	3	596	junction_2	32	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATAAATTTTAGAGGATCT	10	True	NA	NA	False	NA	NA	NA	140303086	140281071	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_140281534_140300415_140300583_140303040
H1_mix_00071376	chr5	-	1696	1	FSM	ENSG00000249637.3	ENST00000685101.1	930	1	-120	-646	-103	646	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATCGTCTCAAAAAAAAAA	969	False	NA	NA	False	NA	NA	NA	140401563	140399867	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_140399900_140401600
H1_mix_00071377	chr5	-	1466	4	FSM	ENSG00000213523.12	ENST00000602775.5	1466	4	0	0	0	0	multi-exon	FALSE	canonical	3	1156	junction_2	64.546279693118	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGTTTCAGTGTGAAC	-5	True	NA	-23	True	NA	NA	NA	140557456	140550067	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_140550912_140551060_140551170_140551981_140552185_140557146
H1_mix_00071378	chr5	-	1328	5	FSM	ENSG00000213523.12	ENST00000336283.9	1328	5	0	0	0	0	multi-exon	FALSE	canonical	3	828	junction_4	185.576803507335	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGTTTCAGTGTGAAC	-22	True	NA	-23	True	NA	NA	NA	140557473	140550067	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_140550912_140551060_140551170_140551981_140552185_140557146_140557273_140557427
H1_mix_00071384	chr5	-	1455	12	FSM	ENSG00000113108.20	ENST00000412920.7	1455	12	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_6	25.6205625063248	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTATCTGGGAAGGCTGGG	377	False	NA	NA	False	NA	NA	NA	140564245	140558584	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_140558822_140560312_140560505_140560638_140560755_140561017_140561102_140561364_140561450_140561586_140561702_140562099_140562228_140562352_140562500_140562662_140562724_140563593_140563671_140563751_140563916_140564196
H1_mix_00071390	chr5	-	689	3	FSM	ENSG00000131495.9	ENST00000512088.1	627	3	-123	61	3	44	multi-exon	FALSE	canonical	3	78	junction_1	771.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCAACCACTGAGGCAAA	10	False	NA	33	True	NA	NA	NA	140647768	140645429	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_140645726_140647255_140647363_140647482
H1_mix_00071391	chr5	-	3849	12	FSM	ENSG00000170445.16	ENST00000675094.1	3849	12	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_5	143.973367601485	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGTACGGGTGTAAACCCA	-36	True	NA	NA	False	NA	NA	NA	140691389	140673034	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_140674329_140674678_140674826_140675016_140675134_140676653_140676897_140676988_140677143_140677326_140677421_140677654_140677754_140677907_140679128_140679787_140679884_140683099_140683220_140690854_140690945_140691214
H1_mix_00071392	chr5	-	5497	10	FSM	ENSG00000170445.16	ENST00000506579.6	5497	10	0	0	0	0	multi-exon	FALSE	canonical	3	427	junction_5	41.3855703367583	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGTACGGGTGTAAACCCA	-36	True	NA	NA	False	NA	NA	NA	140691389	140673034	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_140674329_140674678_140674826_140675016_140676897_140676988_140677117_140677326_140677421_140677654_140679128_140679787_140679884_140683099_140683220_140690854_140690945_140691214
H1_mix_00071393	chr5	-	1949	13	FSM	ENSG00000170445.16	ENST00000504156.7	1948	13	0	-1	0	0	multi-exon	FALSE	canonical	3	427	junction_6	40.7726590035801	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCGTGTGTCAGTGATGC	-17	True	NA	-2	True	AATAAA	-18	NA	140691370	140673903	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_140674329_140674678_140674826_140675016_140675134_140676653_140676897_140676988_140677117_140677326_140677421_140677654_140677754_140677907_140678016_140679001_140679128_140679787_140679884_140683099_140683220_140690854_140690945_140691214
H1_mix_00071394	chr5	-	1896	13	FSM	ENSG00000170445.16	ENST00000457527.6	1896	13	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_8	125.512587903454	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCGTGTGTCAGTGATGC	-24	True	NA	-2	True	AATAAA	-18	NA	140691377	140673903	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_140674329_140674678_140674826_140675016_140675134_140676653_140676897_140676988_140677117_140677326_140677421_140677654_140677754_140677907_140678016_140679061_140679128_140679787_140679884_140683099_140683220_140690854_140690945_140691214
H1_mix_00071396	chr5	-	2295	1	FSM	ENSG00000178913.9	ENST00000313368.8	2295	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTATCTTGTTCTTTCA	-11	True	NA	-5	True	AATAAA	-25	NA	141320784	141318489	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_141318500_141320800
H1_mix_00071397	chr5	-	5767	29	NNC	ENSG00000131504.18	novel	5843	29	NA	NA	-2	51574	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	115.759713305147	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGAGAAGGAAATGAGGA	-17	True	NA	NA	False	NA	NA	NA	141619002	141463441	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_141463469_141515017_141517009_141524142_141524230_141526037_141526174_141526296_141526461_141527571_141527698_141528452_141528583_141528701_141528942_141529171_141529274_141529602_141529698_141534334_141534434_141571427_141571437_141571925_141572041_141573491_141574209_141574966_141575147_141576229_141576295_141576755_141576872_141577474_141577592_141578224_141578344_141578514_141578626_141579087_141579197_141580743_141580884_141582311_141582376_141583205_141583293_141583484_141583616_141584123_141584226_141587041_141587198_141588223_141588251_141618797
H1_mix_00071401	chr5	-	1938	15	FSM	ENSG00000171720.10	ENST00000305264.8	1933	15	0	-5	0	0	multi-exon	FALSE	canonical	3	1191	junction_2	92.1940334073652	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCTTTCTAGGAATGTTAA	-3	True	NA	-18	True	AATAAA	-26	NA	141636849	141620875	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_141621538_141625207_141625366_141625684_141625765_141626012_141626072_141626193_141626284_141627892_141627958_141628113_141628188_141628558_141628640_141629172_141629307_141629683_141629740_141629859_141629917_141630043_141630126_141634810_141634954_141636547_141636631_141636735
H1_mix_00071402	chr5	-	829	3	FSM	ENSG00000171720.10	ENST00000469207.5	829	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	755.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCACTGTTTTTATCCAA	3101	False	NA	-67	True	NA	NA	NA	141626070	141620924	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_141621538_141625207_141625366_141626012
H1_mix_00071405	chr5	-	782	5	FSM	ENSG00000171720.10	ENST00000492407.1	782	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	595.466413830369	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCCCAGACTTCACACTT	7635	False	NA	NA	False	NA	NA	NA	141629258	141625749	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_141625765_141626193_141626284_141627892_141627958_141628113_141628640_141629172
H1_mix_00071411	chr5	-	3938	11	FSM	ENSG00000197948.11	ENST00000523856.5	3932	11	0	-6	0	0	multi-exon	FALSE	canonical	3	40	junction_2	14.7258276507638	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACCATATGTTCTTCCTC	4029	False	NA	-9	True	AATAAA	-19	NA	141647483	141639301	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_141641564_141641701_141641758_141643000_141643089_141644217_141644439_141644572_141644691_141644858_141644943_141645019_141645149_141645770_141645933_141646086_141646723_141647134_141647231_141647397
H1_mix_00071412	chr5	-	4319	20	FSM	ENSG00000197948.11	ENST00000435817.7	4319	20	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_16	21.4433480248593	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACCATATGTTCTTCCTC	-14	True	NA	-9	True	AATAAA	-19	NA	141651418	141639301	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_141641564_141641701_141641758_141643000_141643089_141644217_141644439_141644572_141644691_141644858_141644943_141645019_141645149_141645770_141645933_141646086_141646192_141646602_141646723_141647134_141647231_141647397_141647521_141647967_141648097_141648956_141649021_141649171_141649309_141649394_141649537_141649886_141649955_141650358_141650405_141651019_141651118_141651347
H1_mix_00071413	chr5	-	2457	20	NIC	ENSG00000197948.11	novel	4319	20	NA	NA	14	65	combination_of_known_junctions	FALSE	canonical	2	40	junction_2	15.5458396426152	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGGTCACTGGGGTTGG	0	True	NA	NA	False	NA	NA	NA	141651404	141641143	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_141641564_141641701_141641758_141643000_141643089_141644217_141644439_141644572_141644691_141644858_141644943_141645019_141645149_141645770_141645933_141646086_141646192_141646602_141646723_141647134_141647231_141647397_141647521_141647967_141648097_141648956_141649021_141649171_141649309_141649394_141649531_141649886_141649955_141650358_141650405_141651019_141651118_141651347
H1_mix_00071414	chr5	-	581	3	FSM	ENSG00000197948.11	ENST00000522386.1	581	3	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	6.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAAGAGGTTCAGCGCTT	3681	False	NA	NA	False	NA	NA	NA	141647831	141646671	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_141646723_141647134_141647231_141647397
H1_mix_00071416	chr5	-	3185	16	FSM	ENSG00000120318.16	ENST00000512390.1	3179	16	0	-6	0	0	multi-exon	FALSE	canonical	3	128	junction_13	18.6457025135076	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATTCTCATTCATTCA	6440	False	NA	-6	True	AATAAA	-17	NA	141666744	141653401	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_141654436_141655361_141655401_141655620_141655759_141655868_141655933_141656063_141656100_141656193_141656277_141656503_141656638_141656717_141656847_141658364_141658480_141658578_141658654_141659407_141659477_141659778_141659927_141661683_141662256_141664921_141665086_141665310_141665375_141666423
H1_mix_00071418	chr5	-	5245	33	NNC	ENSG00000120318.16	novel	5258	33	NA	NA	-32	14	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_13	37.6969696850755	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCATTCAACAAATATGTA	NA	False	NA	9	True	AATAAA	-32	NA	141682262	141653386	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_141654436_141655361_141655401_141655620_141655759_141655868_141655933_141656063_141656100_141656193_141656277_141656503_141656638_141656717_141656847_141658364_141658480_141658578_141658654_141659407_141659477_141659778_141659927_141661683_141661790_141662102_141662256_141664921_141665086_141665310_141665375_141666423_141666644_141669708_141669812_141669921_141670064_141670511_141670629_141671264_141671401_141671569_141671753_141671894_141671981_141672101_141672302_141672551_141672659_141672740_141672926_141673012_141673134_141673400_141673471_141673604_141673809_141679544_141679657_141679760_141679823_141679962_141680504_141682172
H1_mix_00071419	chr5	-	4985	32	NIC	ENSG00000120318.16	novel	4927	32	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_13	37.8497495101522	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATTCTCATTCATTCAT	-1	True	NA	-5	True	AATAAA	-18	NA	141682201	141653400	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_141654436_141655361_141655401_141655620_141655759_141655868_141655933_141656063_141656100_141656193_141656277_141656503_141656638_141656717_141656847_141658364_141658480_141658578_141658654_141659407_141659477_141659778_141659927_141661683_141661790_141664921_141665086_141665310_141665375_141666423_141666644_141669708_141669812_141669921_141670064_141670511_141670629_141671264_141671401_141671569_141671753_141671894_141671981_141672101_141672302_141672551_141672659_141672740_141672926_141673012_141673134_141673400_141673471_141673604_141673809_141679544_141679657_141679760_141679823_141679962_141680472_141682172
H1_mix_00071420	chr5	-	5420	33	NIC	ENSG00000120318.16	novel	5258	33	NA	NA	-37	156	combination_of_known_junctions	FALSE	canonical	3	54	junction_32	30.6246811207888	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTGAACAAGTGAGTTTA	NA	False	NA	NA	False	AATAAA	-13	NA	141682267	141653244	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_141654436_141655361_141655401_141655620_141655759_141655868_141655933_141656063_141656100_141656193_141656277_141656503_141656638_141656717_141656847_141658364_141658480_141658578_141658654_141659407_141659477_141659778_141659927_141661683_141661790_141662042_141662256_141664921_141665086_141665310_141665375_141666423_141666644_141669708_141669812_141669921_141670064_141670511_141670629_141671264_141671401_141671569_141671753_141671894_141671981_141672101_141672302_141672551_141672659_141672740_141672926_141673012_141673134_141673400_141673471_141673604_141673809_141679544_141679657_141679760_141679823_141679962_141680472_141682172
H1_mix_00071424	chr5	-	3852	4	NNC	ENSG00000156453.14	novel	3827	3	NA	NA	0	23026	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	156.74253482135	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGGAGAAACAGAGGCAG	8	True	NA	NA	False	NA	NA	NA	141878410	141830063	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_141830089_141862651_141865428_141868568_141869432_141878222
H1_mix_00071426	chr5	-	4819	5	FSM	ENSG00000156453.14	ENST00000287008.8	4814	5	0	-5	0	5	multi-exon	FALSE	canonical	3	49	junction_1	138.102317142038	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCTGTGCCCTGGGGGGAT	8	True	NA	5	True	AATACA	-25	NA	141878410	141853084	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_141854437_141857251_141857472_141863231_141865428_141868568_141869432_141878222
H1_mix_00071427	chr5	-	3828	3	FSM	ENSG00000156453.14	ENST00000394536.4	3827	3	0	-1	0	1	multi-exon	FALSE	canonical	3	332	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTTTCTTATTTTCTG	8	True	NA	-1	True	AATAAA	-18	NA	141878410	141862650	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_141865428_141868568_141869432_141878222
H1_mix_00071428	chr5	-	2548	8	NNC	ENSG00000113552.16	novel	2267	7	NA	NA	-236	14974	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	279.874315815262	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAAAGGCAGCTGGAAT	2918	False	NA	NA	False	AAAAAG	-2	NA	142013277	141976774	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_141976806_142000670_142002130_142003087_142003263_142004931_142005117_142006143_142006327_142007798_142007901_142011911_142012042_142012994
H1_mix_00071430	chr5	-	2625	8	FSM	ENSG00000113552.16	ENST00000503794.5	2622	8	0	-3	0	-1	multi-exon	FALSE	canonical	1	3	junction_7	342.75814046809	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACATGTCATTTGTGGAT	3222	False	NA	-30	True	ATTAAA	-15	NA	142012973	142000674	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_142002130_142003087_142003263_142004931_142005117_142006143_142006327_142007798_142007901_142011911_142012042_142012287_142012378_142012668
H1_mix_00071431	chr5	-	2319	8	FSM	ENSG00000113552.16	ENST00000500692.6	2319	8	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_7	336.025266299778	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATGTCATTTGTGGATT	-3	True	NA	-29	True	ATTAAA	-16	NA	142013030	142000673	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_142002130_142003087_142003263_142004931_142005117_142006143_142006327_142007798_142007901_142011911_142012042_142012287_142012340_142012994
H1_mix_00071432	chr5	-	2983	6	FSM	ENSG00000113552.16	ENST00000508177.5	2980	6	0	-3	0	-1	multi-exon	FALSE	canonical	3	717	junction_1	57.2454364993403	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACATGTCATTTGTGGAT	3401	False	NA	-30	True	ATTAAA	-15	NA	142012794	142000674	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_142002130_142003087_142003263_142004931_142005117_142006143_142006327_142007798_142007901_142011911
H1_mix_00071433	chr5	-	5042	3	FSM	ENSG00000187678.10	ENST00000344120.4	4938	3	-106	2	-86	1	multi-exon	TRUE	canonical	3	26	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGGTGTGTTTGTGTGT	NA	False	NA	-9	True	TATAAA	-32	NA	142325107	142310428	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_142315156_142319743_142319795_142324843
H1_mix_00071434	chr5	-	5105	2	FSM	ENSG00000187678.10	ENST00000434127.3	4904	2	0	-201	0	198	multi-exon	FALSE	canonical	3	189	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGAGCCTCCTTCCTGGGA	0	True	NA	NA	False	NA	NA	NA	142325021	142310228	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_142315156_142324843
H1_mix_00071435	chr5	-	6882	9	FSM	ENSG00000113580.15	ENST00000394464.7	6778	9	-108	4	88	-2	multi-exon	FALSE	canonical	2	7	junction_8	4.9434299833213	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTATGTGACTCCAACA	1559	False	NA	-16	True	AATAAA	-13	NA	143403794	143277937	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_143282042_143282567_143282726_143295459_143295591_143298667_143298813_143300484_143300764_143310096_143310214_143314001_143314169_143399655_143400853_143403210
H1_mix_00071436	chr5	-	3151	6	FSM	ENSG00000145817.17	ENST00000274496.10	3144	6	0	-7	0	7	multi-exon	FALSE	canonical	3	256	junction_1	30.0039997333689	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCGCTTTTTTTTTGTCT	-26	True	NA	3	True	ATTAAA	-32	NA	144170659	144158154	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_144160560_144162217_144162400_144164110_144164257_144165431_144165605_144169845_144169966_144170534
H1_mix_00071438	chr5	-	4817	7	FSM	ENSG00000186314.12	ENST00000683046.1	4817	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_6	8.40138877408571	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATGTGTGCATTCTAA	11	True	NA	-2	True	AATAAA	-15	NA	145835342	145756343	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_145760526_145764930_145765001_145796441_145796548_145817893_145818055_145819944_145820019_145823076_145823135_145835176
H1_mix_00071441	chr5	-	7362	15	FSM	ENSG00000133706.19	ENST00000674471.1	7339	15	0	-23	0	23	multi-exon	FALSE	canonical	3	1218	junction_8	174.980173804034	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACTTTTAATTTTGGAAT	259	False	NA	NA	False	TTTAAA	-2	NA	146146272	146110542	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_146114312_146120370_146120504_146122491_146122588_146123981_146124087_146126434_146126546_146128671_146128783_146128977_146129119_146130017_146130159_146131018_146131110_146132897_146133082_146135600_146135665_146140203_146140262_146142871_146143085_146143411_146143551_146144266
H1_mix_00071443	chr5	-	7113	31	FSM	ENSG00000133706.19	ENST00000674270.1	7090	31	0	-23	0	23	multi-exon	FALSE	canonical	3	101	junction_27	285.437226023516	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACTTTTAATTTTGGAAT	-20	True	NA	NA	False	TTTAAA	-2	NA	146182650	146110542	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_146114312_146120370_146120504_146122491_146122588_146123981_146124087_146126434_146126546_146128671_146128783_146128977_146129119_146130017_146130159_146131018_146131110_146132897_146133082_146135600_146135665_146140203_146140262_146142871_146143085_146143411_146143551_146144266_146144350_146144471_146144538_146144623_146144710_146149621_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146171909_146171991_146172686_146172775_146177546_146177666_146182487
H1_mix_00071444	chr5	-	9881	31	FSM	ENSG00000133706.19	ENST00000674218.1	9858	31	0	-23	0	23	multi-exon	FALSE	canonical	3	1073	junction_18	156.308345550994	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACTTTTAATTTTGGAAT	-40	True	NA	NA	False	TTTAAA	-2	NA	146182670	146110542	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_146114312_146120370_146120504_146122491_146122588_146123981_146124087_146126434_146126546_146128671_146128783_146128977_146129119_146130017_146130159_146131018_146131110_146132897_146133082_146135600_146135665_146140203_146143085_146143411_146143551_146144266_146144350_146144471_146144538_146144623_146144710_146149621_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182487
H1_mix_00071445	chr5	-	7354	32	FSM	ENSG00000133706.19	ENST00000674170.1	7331	32	0	-23	0	23	multi-exon	FALSE	canonical	3	8	junction_17	296.453645259628	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACTTTTAATTTTGGAAT	NA	False	NA	NA	False	TTTAAA	-2	NA	146182683	146110542	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_146114312_146120370_146120504_146122491_146122588_146123981_146124087_146126434_146126546_146128671_146128783_146128977_146129119_146130017_146130159_146131018_146131110_146132897_146133082_146135600_146135665_146140203_146140262_146142871_146143085_146143411_146143551_146144266_146144350_146144471_146144538_146144623_146144710_146149551_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182487
H1_mix_00071446	chr5	-	4760	32	FSM	ENSG00000133706.19	ENST00000394434.7	4760	32	0	0	0	0	multi-exon	FALSE	canonical	3	1073	junction_19	156.493715651784	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATTTATTCTTTTATTCT	-20	True	NA	-20	True	AATAAA	-23	NA	146182650	146113033	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_146114312_146120370_146120504_146122491_146122588_146123981_146124087_146126434_146126546_146128671_146128783_146128977_146129119_146130017_146130159_146131018_146131110_146132897_146133082_146135600_146135665_146140203_146140262_146142871_146143085_146143411_146143551_146144266_146144350_146144471_146144538_146144623_146144710_146149621_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182487
H1_mix_00071447	chr5	-	4777	32	FSM	ENSG00000133706.19	ENST00000674398.1	4768	32	0	-9	0	0	multi-exon	FALSE	canonical	3	47	junction_6	286.355967031103	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATTTATTCTTTTATTCT	-40	True	NA	-20	True	AATAAA	-23	NA	146182670	146113033	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_146114312_146120370_146120504_146122491_146122588_146123981_146124087_146126434_146126546_146128671_146128780_146128977_146129119_146130017_146130159_146131018_146131110_146132897_146133082_146135600_146135665_146140203_146140262_146142871_146143085_146143411_146143551_146144266_146144350_146144471_146144538_146144623_146144710_146149621_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182487
H1_mix_00071451	chr5	-	4783	15	FSM	ENSG00000133706.19	ENST00000674417.1	4783	15	0	0	0	0	multi-exon	FALSE	canonical	3	1073	junction_2	120.910681319488	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATATGGGGTTCTAACCT	-33	True	NA	NA	False	NA	NA	NA	146182663	146146511	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182487
H1_mix_00071454	chr5	-	3151	1	FSM	ENSG00000173250.3	ENST00000311104.3	3047	1	-101	-3	-101	3	mono-exon	FALSE	NA	NA	NA	NA	NA	619	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGTAAAGAAATAAAAATAAT	NA	False	NA	-52	True	AGTAAA	-39	NA	146516291	146513140	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_146513100_146516300
H1_mix_00071455	chr5	-	11049	9	FSM	ENSG00000156475.19	ENST00000394409.7	10704	9	-354	9	-102	-9	multi-exon	FALSE	canonical	3	178	junction_8	24.806438176409	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTTTACAAATTACCCAG	5394	False	NA	NA	False	ATTAAA	-6	NA	146878996	146581154	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_146590227_146592970_146593063_146600290_146600461_146638250_146638416_146650546_146650725_146691127_146691241_146697978_146698145_146701044_146701143_146878001
H1_mix_00071457	chr5	-	2146	11	NIC	ENSG00000156475.19	novel	2569	10	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	91.8529259196461	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCTTGTTTTGTGAAAA	12	True	NA	0	True	AATAAA	-22	NA	146878752	146589503	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_146590227_146592970_146593063_146600290_146600461_146638250_146638416_146650546_146650725_146691127_146691241_146697978_146698145_146701044_146701143_146856498_146856584_146878001_146878196_146878590
H1_mix_00071458	chr5	-	6190	10	FSM	ENSG00000156475.19_ENSG00000280646.2	ENST00000453001.5	2569	10	-211	-3410	-102	0	multi-exon	FALSE	canonical	3	36	junction_9	77.2283770528827	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACTGAGAAACATTCACAC	5394	False	NA	NA	False	NA	NA	NA	146878996	146586098	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_146590227_146592970_146593063_146600290_146600461_146638250_146638416_146650546_146650725_146691127_146691241_146697978_146698145_146701044_146701143_146856498_146856584_146878001
H1_mix_00071459	chr5	-	2093	10	FSM	ENSG00000156475.19	ENST00000530902.5	2093	10	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_9	40.9281212751222	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCTTGTTTTGTGAAAA	5496	False	NA	0	True	AATAAA	-22	NA	146878894	146589503	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_146590227_146592970_146593063_146600290_146600461_146638250_146638416_146650546_146650725_146691127_146691241_146697978_146698145_146701044_146701143_146878001_146878196_146878700
H1_mix_00071460	chr5	-	5615	14	FSM	ENSG00000113657.13	ENST00000398514.7	5309	14	-307	1	0	-1	multi-exon	FALSE	canonical	3	738	junction_13	107.979945541074	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACATTGTTCTCCAGTCT	91	False	NA	-19	True	ATTAAA	-16	NA	147454266	147390811	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_147394124_147395558_147395722_147397665_147397846_147399081_147399253_147400691_147400834_147401539_147401697_147405609_147405731_147408727_147408797_147412607_147412689_147413595_147413658_147415708_147415874_147418446_147418632_147424874_147424964_147453548
H1_mix_00071461	chr5	-	5279	15	NIC	ENSG00000113657.13	novel	5309	14	NA	NA	-81	-1	combination_of_known_junctions	FALSE	canonical	3	46	junction_14	278.996059148527	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACATTGTTCTCCAGTCT	10	False	NA	-19	True	ATTAAA	-16	NA	147454347	147390811	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_147394124_147395558_147395722_147397665_147397846_147399081_147399253_147400691_147400834_147401539_147401697_147405609_147405731_147408727_147408797_147412607_147412689_147413595_147413658_147415708_147415874_147418446_147418632_147424874_147424964_147453548_147453755_147454171
H1_mix_00071462	chr5	-	5492	14	FSM	ENSG00000113657.13	ENST00000343218.10	5492	14	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_13	199.786365190361	946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTCTCCAGTCTTCTT	-2	True	NA	-15	True	ATTAAA	-20	NA	147510068	147390807	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_147394124_147395558_147395722_147397665_147397846_147399081_147399253_147400691_147400834_147401539_147401697_147405609_147405731_147408727_147408797_147412607_147412689_147413595_147413658_147415708_147415874_147418446_147418632_147424874_147424964_147509477
H1_mix_00071464	chr5	-	9144	22	FSM	ENSG00000176049.16	ENST00000616793.5	9153	22	0	9	0	-9	multi-exon	FALSE	canonical	3	13	junction_1	19.8324043685719	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAACTTTATCTTTC	6	True	NA	NA	False	AATAAA	-13	NA	147782728	147585446	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_147591687_147601740_147601812_147612305_147612372_147617910_147618115_147620665_147620744_147623620_147623690_147628750_147628817_147629692_147629747_147631412_147631512_147632679_147632779_147636221_147636285_147636964_147637049_147639631_147639761_147640703_147640824_147641707_147641765_147644057_147644199_147644849_147644997_147648375_147648475_147650337_147650548_147660947_147661446_147671677_147671955_147782455
H1_mix_00071468	chr5	-	767	3	Genic_Genomic	ENSG00000288774.1	novel	218	1	NA	NA	64	16525	multi-exon	FALSE	canonical	2	5	junction_1	20	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGAAATATTGTTTTTAG	7887	False	NA	NA	False	AATATA	-14	NA	147874267	147857588	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr5_-_147857834_147872169_147872354_147873929
H1_mix_00071469	chr5	-	7058	10	FSM	ENSG00000113712.19	ENST00000657001.1	4902	10	-505	-1651	-431	1271	multi-exon	FALSE	canonical	0	0	junction_1	457.11505426917	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTAGGCACTTTAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	149551902	149491710	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_149496861_149505482_149505596_149507026_149507134_149509878_149509954_149511793_149511873_149513069_149513210_149520289_149520389_149525044_149525172_149550074_149550182_149550841
H1_mix_00071472	chr5	-	8636	2	FSM	ENSG00000230551.4	ENST00000499521.2	8636	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTTGTGCTTATCCTCT	NA	False	NA	-24	True	AATAAA	-42	NA	149504670	149494313	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_149499294_149501014
H1_mix_00071473	chr5	-	2570	11	FSM	ENSG00000113712.19	ENST00000515768.6	2570	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	611.834650865738	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCATTCTTTCATTTTTTT	102	False	NA	NA	False	AAAAAG	-24	NA	149551404	149495784	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_149496861_149505482_149505596_149507026_149507134_149509878_149509954_149511793_149511873_149513069_149513210_149517793_149517878_149520289_149520389_149525044_149525172_149550074_149550182_149550841
H1_mix_00071474	chr5	-	1856	10	FSM	ENSG00000113712.19	ENST00000515435.5	1856	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	631.878641262664	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTTTATTTTGAAATG	10	True	NA	-9	True	GATAAA	-35	NA	149550299	149496053	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_149496861_149505482_149505596_149507026_149507134_149509878_149509954_149511793_149511873_149513069_149513210_149517793_149517878_149520289_149520389_149525044_149525172_149550074
H1_mix_00071478	chr5	-	3113	2	FSM	ENSG00000183876.9	ENST00000328668.8	3113	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGGATGCAGTGCTGTC	20	True	NA	-7	True	ATTAAA	-17	NA	150302905	150296342	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_150298613_150302062
H1_mix_00071479	chr5	-	3092	9	FSM	ENSG00000019582.17	ENST00000009530.13	1653	9	159	-1598	0	1596	multi-exon	FALSE	canonical	2	21	junction_2	178.858708202872	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAAGCGTCCTGTGTTGG	2	True	NA	NA	False	AATACA	-18	NA	150412751	150400040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_150402251_150402562_150402626_150403120_150403313_150404679_150404768_150405084_150405181_150406258_150406322_150406880_150406961_150407151_150407325_150412624
H1_mix_00071480	chr5	-	1287	8	FSM	ENSG00000019582.17	ENST00000353334.11	1270	8	0	-17	0	0	multi-exon	FALSE	canonical	3	363	junction_2	41.0763351106504	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAGTAATTAGAACACTCT	3	True	NA	-21	True	AATAAA	-2	NA	150412750	150401652	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_150402251_150402562_150402626_150404679_150404768_150405084_150405181_150406258_150406322_150406880_150406961_150407151_150407325_150412624
H1_mix_00071481	chr5	-	2314	5	FSM	ENSG00000164587.13	ENST00000401695.8	2314	5	0	0	0	0	multi-exon	FALSE	canonical	3	1235	junction_4	11381.0263898956	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGGTTTCCTACTTTTG	60	False	NA	NA	False	AATAAA	-41	NA	150449696	150442634	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_150444354_150445608_150445686_150446801_150446964_150447584_150447736_150449491
H1_mix_00071482	chr5	-	2146	5	FSM	ENSG00000164587.13	ENST00000407193.7	2146	5	0	0	0	0	multi-exon	FALSE	canonical	3	22852	junction_4	3219.53416661479	2926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGGTTTCCTACTTTTG	0	True	NA	NA	False	AATAAA	-41	NA	150449739	150442634	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_150444354_150445608_150445686_150446801_150446964_150447584_150447736_150449702
H1_mix_00071483	chr5	-	712	5	FSM	ENSG00000164587.13	ENST00000312037.6	712	5	0	0	0	0	multi-exon	FALSE	canonical	3	2915	junction_4	10676.4559516489	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTCAACTCCAGCCTTC	-5	True	NA	-15	True	AATAAA	-16	NA	150449691	150444237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_150444354_150445608_150445686_150446801_150446964_150447584_150447736_150449485
H1_mix_00071484	chr5	-	3119	3	FSM	ENSG00000164587.13	ENST00000519690.1	3119	3	0	0	0	0	multi-exon	FALSE	canonical	3	26120	junction_1	2388.5	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTCAACTCCAGCCTTC	29	False	NA	-15	True	AATAAA	-16	NA	150449727	150444237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_150444354_150445608_150445686_150446801
H1_mix_00071485	chr5	-	649	3	NNC	ENSG00000250309.2	novel	425	2	NA	NA	134	5074	at_least_one_novel_splicesite	TRUE	canonical	3	6	junction_2	1.5	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTGAGTATTTCTATT	NA	False	NA	-11	True	AATAAA	-16	NA	150672256	150665583	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_150666032_150670149_150670210_150672115
H1_mix_00071491	chr5	-	4118	13	FSM	ENSG00000132912.13	ENST00000447998.7	4116	13	0	-2	0	2	multi-exon	FALSE	canonical	3	117	junction_10	20.9775011752009	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCCACTCATCACCTTC	-9	True	NA	NA	False	AATATA	-21	NA	150759017	150708437	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_150711363_150715564_150715663_150718275_150718384_150719715_150719771_150722906_150722981_150730630_150730741_150731043_150731157_150731415_150731490_150733367_150733476_150742113_150742158_150753478_150753658_150756416_150756488_150758858
H1_mix_00071492	chr5	-	6582	5	FSM	ENSG00000145908.13	ENST00000427179.5	4155	5	-189	-2238	0	2231	multi-exon	FALSE	canonical	3	75	junction_3	20.8626460450251	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTATGTTTTAGTGTTCA	0	True	NA	NA	False	AATAAA	-15	NA	150904978	150892160	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_150898185_150898427_150898555_150903140_150903183_150903863_150903978_150904703
H1_mix_00071493	chr5	-	3266	6	FSM	ENSG00000145908.13	ENST00000274599.10	3258	6	8	-16	6	9	multi-exon	FALSE	non_canonical	1	7	junction_1	44.3197472916983	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCACTTCTTTGTGATCC	6	True	NA	-5	True	CATAAA	-37	NA	150904972	150894382	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_150896974_150898061_150898185_150898427_150898555_150903140_150903183_150903863_150903978_150904703
H1_mix_00071494	chr5	-	3381	8	NNC	ENSG00000145908.13	novel	3323	7	NA	NA	86	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	51.0565912513172	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACCCTGCCTAATGTCTC	86	False	NA	-23	True	CATAAA	-19	NA	150904892	150894400	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_150896970_150898057_150898185_150898427_150898555_150902408_150902567_150903140_150903183_150903328_150903384_150903863_150903978_150904703
H1_mix_00071495	chr5	-	3263	6	NIC	ENSG00000145908.13	novel	3323	7	NA	NA	0	-5	intron_retention	FALSE	non_canonical	1	7	junction_1	51.7354810550748	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGACCCTGCCTAATGT	189	False	NA	-26	True	CATAAA	-16	NA	150904789	150894403	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_150896974_150898061_150898185_150898427_150898555_150903140_150903384_150903863_150903978_150904703
H1_mix_00071496	chr5	-	4186	4	NIC	ENSG00000145908.13	novel	4155	5	NA	NA	60	-56	intron_retention	FALSE	canonical	2	10	junction_2	54.5221667458903	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATACTTGGATTTATTTT	-9	True	NA	-2	True	NA	NA	NA	150904918	150894454	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_150898185_150898427_150898555_150903863_150903978_150904703
H1_mix_00071498	chr5	-	2682	17	FSM	ENSG00000145901.16	ENST00000520931.5	2680	17	0	-2	0	2	multi-exon	TRUE	canonical	3	16	junction_16	34.1745862264637	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGACTCATGTTCATTTA	12	True	NA	-6	True	CATAAA	-23	NA	151081016	151029942	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_151030748_151032286_151032384_151033607_151033800_151035001_151035068_151035581_151035708_151036789_151036922_151039096_151039226_151042539_151042672_151042895_151042962_151045860_151045951_151049823_151049948_151052164_151052260_151056765_151056958_151060317_151060396_151062126_151062213_151063612_151063748_151080879
H1_mix_00071499	chr5	-	2937	18	FSM	ENSG00000145901.16	ENST00000389378.6	2935	18	0	-2	0	0	multi-exon	FALSE	canonical	3	21	junction_2	31.987346114029	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTGACTCATGTTCATT	6594	False	NA	-8	True	CATAAA	-21	NA	151081084	151029944	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_151030748_151032286_151032401_151033607_151033800_151035001_151035068_151035581_151035708_151036789_151036922_151039096_151039226_151042539_151042672_151042895_151042962_151045860_151045951_151049823_151049948_151052164_151052260_151056765_151056958_151060317_151060396_151062126_151062213_151063612_151063748_151064959_151065132_151080879
H1_mix_00071500	chr5	-	2200	18	FSM	ENSG00000145901.16	ENST00000518977.5	2200	18	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	34.1075035631158	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTACACCAGTCCCTGAA	-46	True	NA	NA	False	NA	NA	NA	151081074	151030580	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_151030674_151032286_151032384_151033607_151033800_151035001_151035068_151035581_151035708_151036789_151036922_151039096_151039226_151042539_151042672_151042895_151042962_151045860_151045951_151049823_151049948_151052164_151052260_151056765_151056958_151060317_151060396_151062126_151062213_151063612_151063748_151064959_151065132_151080879
H1_mix_00071504	chr5	-	3105	10	FSM	ENSG00000113140.11	ENST00000231061.9	3451	10	0	346	0	-346	multi-exon	FALSE	canonical	3	1406	junction_3	66.8072591605374	865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGTGTTCTCTTCTACA	0	True	NA	1	True	AATAAA	-24	NA	151686915	151661441	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_151663600_151664086_151664236_151666360_151666510_151667466_151667601_151669663_151669785_151671572_151671695_151673128_151673217_151674611_151674675_151676131_151676202_151686864
H1_mix_00071506	chr5	-	466	4	FSM	ENSG00000177556.12	ENST00000520382.5	466	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	436.548075499391	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTTGTCTTGCCTGGTCT	4749	False	NA	-9	True	AATAAA	-21	NA	151753895	151742821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_151742960_151746278_151746450_151751703_151751780_151753814
H1_mix_00071509	chr5	-	549	5	NNC	ENSG00000177556.12	novel	471	4	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	462.270686394887	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGTTGTCTTGCCTGGT	7738	False	151758644	-11	True	AATAAA	-19	NA	151758631	151742823	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_151742960_151746278_151746450_151751703_151751780_151753814_151753895_151758545
H1_mix_00071512	chr5	-	4422	14	FSM	ENSG00000055147.19	ENST00000351797.9	4414	14	12	-20	0	20	multi-exon	TRUE	canonical	3	57	junction_13	10.0525247792716	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGAGACTGAGCTGTTT	-3	True	NA	NA	False	AATAAA	-45	NA	154038898	153990127	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_153993111_153994918_153994973_153997802_153997876_154002250_154002391_154002846_154002970_154011240_154011321_154026398_154026523_154027175_154027335_154028148_154028284_154029488_154029581_154033790_154033884_154034277_154034378_154034743_154034968_154038856
H1_mix_00071513	chr5	-	2947	9	FSM	ENSG00000170271.11	ENST00000326080.10	2947	9	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	2.72717802865893	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAGTGGATAATTTTTTT	7	True	NA	-1	True	AATAAA	-15	NA	154850603	154818491	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_154820473_154821259_154821427_154822471_154822578_154823386_154823593_154830800_154830923_154834624_154834729_154834842_154834935_154838130_154838179_154850482
H1_mix_00071514	chr5	-	5404	28	FSM	ENSG00000082516.9	ENST00000285873.8	5404	28	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_17	27.2842578609593	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATATTCCTAATTTTGCA	-8	True	NA	-13	True	ATTAAA	-26	NA	154938211	154887410	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_154888378_154889320_154889418_154891240_154891743_154892386_154892550_154896091_154896344_154898439_154898651_154899190_154899311_154901338_154901487_154902538_154902677_154903079_154903176_154904506_154904630_154905362_154905477_154907590_154907819_154911726_154911899_154912898_154913039_154916997_154917180_154917930_154918005_154919966_154920104_154921342_154921426_154924468_154924555_154925861_154926075_154927384_154927551_154928526_154928660_154931457_154931578_154932098_154932251_154935840_154936023_154937024_154937186_154937967
H1_mix_00071516	chr5	-	1302	2	Antisense	novelGene_ENSG00000170624.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGCGGTTTTGTCGAAA	NA	False	NA	NA	False	NA	NA	NA	156661633	156658707	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr5_-_156658768_156660391
H1_mix_00071519	chr5	-	897	2	FSM	ENSG00000135074.16	ENST00000519752.1	690	2	-122	-85	-104	85	multi-exon	FALSE	canonical	3	44	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTCTTGCAGAGAGGAC	220	False	NA	NA	False	AAGAAA	-15	NA	157575879	157570360	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_157570981_157575602
H1_mix_00071520	chr5	-	3969	12	FSM	ENSG00000113282.14	ENST00000411809.7	3952	12	-45	28	-45	-28	multi-exon	FALSE	canonical	3	335	junction_2	163.76484854765	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTAGACGAAGTAAATGTT	NA	False	NA	NA	False	NA	NA	NA	157859190	157785774	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_157787993_157789362_157789514_157791702_157791996_157794897_157794973_157803649_157803720_157805865_157806113_157809627_157809806_157813062_157813228_157814184_157814294_157816733_157816831_157817442_157817548_157858929
H1_mix_00071521	chr5	-	3987	12	FSM	ENSG00000113282.14	ENST00000523094.5	3987	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_11	262.402913962857	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTAATTCTTTCTCT	-7	True	NA	NA	False	AGTAAA	-17	NA	157859145	157785742	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_157787993_157789362_157789568_157791702_157791996_157794897_157794973_157803649_157803720_157805865_157806113_157809627_157809806_157813062_157813228_157814184_157814294_157816733_157816831_157817442_157817548_157858952
H1_mix_00071522	chr5	-	7322	2	FSM	ENSG00000113282.14	ENST00000524306.1	2905	2	-1280	-3137	0	2593	multi-exon	FALSE	canonical	3	786	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTCCAAAATAAAAATTTCT	NA	False	NA	NA	False	NA	NA	NA	157791841	157783149	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_157787993_157789362
H1_mix_00071524	chr5	-	2346	12	FSM	ENSG00000113282.14	ENST00000523908.5	2346	12	0	0	0	0	multi-exon	FALSE	canonical	3	457	junction_2	131.640193314458	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTGAGACCATTGAAAGC	-5	True	NA	NA	False	NA	NA	NA	157859143	157787404	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_157787993_157789362_157789568_157791702_157791996_157794897_157794973_157803649_157803720_157805865_157806113_157809627_157809806_157813062_157813228_157814184_157814294_157816733_157816831_157817442_157817548_157858929
H1_mix_00071527	chr5	-	3618	11	FSM	ENSG00000145860.12	ENST00000424310.7	3615	11	0	-3	0	3	multi-exon	TRUE	canonical	3	120	junction_4	24.503877244224	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTCTTGTGGTTTG	-7	True	NA	1	True	AATAAA	-21	NA	159209553	159157405	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_159159036_159161265_159161623_159162931_159163080_159168872_159169056_159169678_159169820_159173982_159174159_159176631_159176868_159181959_159182052_159194715_159194825_159203433_159203657_159209230
H1_mix_00071529	chr5	-	235	1	FSM	ENSG00000248626.1	ENST00000505218.1	1006	1	790	-19	790	19	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGTGAGAGCATGAGAGGA	863	False	NA	NA	False	NA	NA	NA	159950708	159950473	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_159950500_159950700
H1_mix_00071530	chr5	-	3995	4	FSM	ENSG00000170234.13	ENST00000456329.7	3991	4	0	-4	0	4	multi-exon	FALSE	canonical	3	80	junction_2	103.124520200904	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATTTAAAAATTATGTTT	3	True	NA	-7	True	AATAAA	-24	NA	160119423	160075877	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_160078169_160080650_160080771_160093100_160094066_160118804
H1_mix_00071531	chr5	-	3373	2	FSM	ENSG00000170234.13	ENST00000307063.9	3373	2	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTGTGTGTTTCTCA	-24	True	NA	-19	True	AATAAA	-17	NA	160119450	160091338	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_160094066_160118804
H1_mix_00071532	chr5	-	5709	6	FSM	ENSG00000135083.17	ENST00000257536.13	5709	6	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_3	29.0337734371542	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGATCTTTTATTTCTT	-10	True	NA	NA	False	ATTAAA	-16	NA	160312564	160249082	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_160253799_160255548_160255709_160259468_160259772_160280524_160280739_160311857_160311973_160312363
H1_mix_00071533	chr5	-	3320	7	FSM	ENSG00000135083.17	ENST00000393977.7	3320	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	96.1486118233412	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGTCCTAGGCATCCC	168	False	NA	-2	True	AATAAA	-26	NA	160312600	160251651	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_160253799_160255548_160255709_160259468_160259772_160276268_160276413_160280524_160280739_160311857_160311973_160312363
H1_mix_00071534	chr5	-	2396	3	FSM	ENSG00000145861.9	ENST00000652664.2	2396	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	1.5	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAACAAAAACGCAGGTA	17	True	NA	NA	False	AAAACA	-16	NA	160370626	160347753	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_160349782_160354767_160355021_160370511
H1_mix_00071535	chr5	-	2808	2	FSM	ENSG00000221886.4	ENST00000408953.4	2808	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGTTTGTCATCTTTAA	-10	True	NA	-2	True	AATAAA	-17	NA	160400054	160393147	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_160395540_160399638
H1_mix_00071536	chr5	-	3481	16	FSM	ENSG00000164609.10	ENST00000297151.9	3480	16	0	-1	0	1	multi-exon	FALSE	canonical	3	215	junction_8	28.1334913107729	765	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGTAGCATTATTTCT	-8	True	NA	0	True	CATAAA	-21	NA	160419081	160401639	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_160403465_160404439_160404557_160404808_160404881_160405030_160405136_160406467_160406630_160407475_160407616_160407745_160407814_160407970_160408069_160408328_160408461_160408649_160408698_160412450_160412520_160413455_160413621_160413898_160413980_160414318_160414473_160415124_160415311_160419022
H1_mix_00071539	chr5	-	1785	4	FSM	ENSG00000170584.11	ENST00000302764.9	7967	4	0	6182	0	1215	multi-exon	FALSE	canonical	3	1127	junction_3	58.0861429258304	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAATTTCAGTTTGTCTC	10	True	NA	NA	False	NA	NA	NA	163460102	163452707	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_163454051_163456928_163457081_163457561_163457611_163459861
H1_mix_00071540	chr5	-	745	1	FSM	ENSG00000254252.1	ENST00000520308.1	745	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTACCATGATTACTT	19	False	NA	NA	False	AATGAA	-5	NA	166029311	166028566	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_166028600_166029300
H1_mix_00071541	chr5	-	1541	5	Fusion	ENSG00000254297.1_ENSG00000254365.1	novel	523	2	NA	NA	0	465	multi-exon	FALSE	canonical	3	66	junction_2	21.6491916708223	135	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTCCTTGGTTTTATT	NA	False	NA	NA	False	AATAAA	-20	NA	167303372	167286854	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr5_-_167287820_167291941_167292030_167294250_167294401_167297462_167297551_167303122
H1_mix_00071542	chr5	-	1202	3	FSM	ENSG00000254297.1	ENST00000523497.1	648	3	0	-554	0	554	multi-exon	FALSE	canonical	3	41	junction_1	42	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTCTGGAATTGCCAGAG	NA	False	NA	NA	False	NA	NA	NA	167303372	167295679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_167296544_167297462_167297551_167303122
H1_mix_00071543	chr5	-	597	3	FSM	ENSG00000253978.2	ENST00000655017.1	590	3	0	-7	0	6	multi-exon	FALSE	canonical	3	12	junction_2	4.5	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTAGTGCTTGTCTTGT	NA	False	NA	1	True	GATAAA	-28	NA	168269415	168229576	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_168229861_168230885_168231057_168269273
H1_mix_00071544	chr5	-	10550	8	NNC	ENSG00000120137.7	novel	10274	7	NA	NA	-245	23519	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	81.9018825628992	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATATATATATATAT	-4	True	NA	NA	False	NA	NA	NA	168579613	168524975	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_168525007_168548494_168557622_168559031_168559158_168561392_168561517_168563888_168564066_168566012_168566267_168568645_168568999_168579255
H1_mix_00071547	chr5	-	4538	13	FSM	ENSG00000072803.18	ENST00000296933.10	4539	13	1	0	1	0	multi-exon	FALSE	canonical	3	66	junction_12	44.3736502142131	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTCTGTTAAGAAATTTTT	-11	True	NA	-1	True	AATAAA	-18	NA	172006872	171861548	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_171864102_171868609_171868797_171869728_171869808_171870747_171870859_171872871_171872991_171876284_171876535_171878010_171878130_171891466_171891605_171899003_171899095_171899913_171900101_171910571_171910798_171914342_171914406_172006457
H1_mix_00071551	chr5	-	5892	19	FSM	ENSG00000072786.13	ENST00000176763.10	5892	19	0	0	0	0	multi-exon	FALSE	canonical	2	59	junction_9	20.899229119223	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCGTTCAGGTTGTTCT	-1	True	NA	NA	False	AATAAA	-13	NA	172188224	172042078	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_172045023_172052928_172053043_172054568_172054695_172055587_172055777_172057348_172057474_172061138_172061269_172064719_172064813_172082325_172082506_172082960_172083085_172090231_172090363_172093411_172093961_172096425_172096561_172105655_172105738_172106619_172106815_172107779_172107853_172117480_172117631_172127372_172127422_172156623_172156789_172187886
H1_mix_00071552	chr5	-	392	3	FSM	ENSG00000072786.13	ENST00000523615.1	672	3	280	0	-155	0	multi-exon	FALSE	canonical	3	106	junction_2	4.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAGCAACAGGAAAAGGCG	9990	False	NA	NA	False	NA	NA	NA	172061350	172055721	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_172055777_172057348_172057474_172061138
H1_mix_00071553	chr5	-	2988	3	FSM	ENSG00000168246.6	ENST00000393792.3	2988	3	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_2	7	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTGTCTTTGCCTTTA	12	True	NA	-20	True	AAAAAG	-11	NA	172283764	172209645	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_172212228_172234121_172234359_172283595
H1_mix_00071554	chr5	-	7787	13	FSM	ENSG00000174705.13	ENST00000311601.6	7779	13	0	-8	0	8	multi-exon	FALSE	canonical	3	252	junction_1	34.9567192714394	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTATGGATTTTATTTGGC	-7	True	NA	7	True	AATAAA	-44	NA	172454525	172333490	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_172339917_172346135_172346262_172347282_172347333_172350362_172350590_172353887_172354006_172358772_172358878_172362734_172362870_172373789_172373816_172382035_172382128_172394562_172394640_172406276_172406353_172422415_172422497_172454277
H1_mix_00071556	chr5	-	2017	4	FSM	ENSG00000120129.6	ENST00000239223.4	2013	4	0	-4	0	4	multi-exon	FALSE	canonical	3	85	junction_2	3.29983164553722	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGCTTTTATTTCTTTGGC	0	True	NA	0	True	AATAAA	-25	NA	172771195	172768091	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_172769133_172769574_172769795_172770160_172770307_172770585
H1_mix_00071557	chr5	-	4264	4	FSM	ENSG00000113739.11	ENST00000265087.9	4254	4	0	-10	0	10	multi-exon	FALSE	canonical	3	286	junction_3	8.73053390247253	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCGTCATTGTCTGAGAG	1	True	NA	-8	True	AATAAA	-28	NA	173328414	173314712	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_173318250_173323218_173323431_173325867_173326011_173328042
H1_mix_00071559	chr5	-	5346	4	FSM	ENSG00000145919.11	ENST00000311086.9	1921	4	0	-3425	0	3425	multi-exon	FALSE	canonical	3	693	junction_2	87.3091569589862	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGAAGATGCACATGTA	-2	True	NA	-6	True	ATTAAA	-16	NA	173616650	173603719	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_173608293_173609237_173609435_173613130_173613256_173616199
H1_mix_00071560	chr5	-	1286	3	FSM	ENSG00000145919.11	ENST00000285908.5	1286	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	345.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCGAAGCTTCAGCTGAAG	206	False	NA	-30	True	AATAAA	-39	NA	173616588	173607520	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_173608293_173613130_173613256_173616199
H1_mix_00071562	chr5	-	814	2	FSM	ENSG00000145919.11	ENST00000480951.1	814	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAGAACATAGCCAGTCC	-5	True	NA	NA	False	GATAAA	-11	NA	173616653	173607932	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_173608293_173616199
H1_mix_00071565	chr5	-	1607	6	FSM	ENSG00000051596.10	ENST00000265097.9	1601	6	12	-18	12	18	multi-exon	FALSE	canonical	3	712	junction_1	88.2011337795609	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTATGTCCTTGAGTTGC	NA	False	NA	4	True	AATAAA	-40	NA	175968303	175959512	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_175960133_175961050_175961152_175961272_175961435_175964950_175965156_175967110_175967268_175967941
H1_mix_00071566	chr5	-	1796	5	FSM	ENSG00000051596.10	ENST00000513482.1	1796	5	0	0	0	0	multi-exon	FALSE	canonical	3	788	junction_1	75.0633066151499	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACCAGTTAATACTGGTA	NA	False	NA	NA	False	NA	NA	NA	175968280	175960218	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_175961152_175961272_175961435_175964950_175965156_175967110_175967268_175967941
H1_mix_00071567	chr5	-	2786	9	FSM	ENSG00000122203.15	ENST00000298569.9	2786	9	0	0	0	0	multi-exon	FALSE	canonical	3	628	junction_6	44.6764409392691	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTATTTTTTTGTCCT	16	True	NA	-7	True	AATAAA	-22	NA	176361764	176346061	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_176347809_176347920_176348064_176348249_176348357_176350612_176350738_176352621_176352749_176355570_176355750_176359480_176359568_176359810_176359919_176361601
H1_mix_00071569	chr5	-	2634	7	FSM	ENSG00000122203.15	ENST00000614420.4	2631	7	0	-3	0	0	multi-exon	FALSE	canonical	2	10	junction_6	260.338508271229	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTATTTTTTTGTCCT	NA	False	NA	-7	True	AATAAA	-22	NA	176361807	176346061	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_176347809_176347920_176348064_176348249_176348357_176350612_176350738_176352621_176352749_176355570_176355750_176361601
H1_mix_00071570	chr5	-	560	5	FSM	ENSG00000122203.15	ENST00000533553.5	560	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	288.274500259735	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGTGGAGCCTCTTTGGA	16	True	NA	NA	False	NA	NA	NA	176361764	176347968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_176348064_176348249_176348357_176359480_176359568_176359810_176359919_176361601
H1_mix_00071571	chr5	-	1119	5	FSM	ENSG00000048162.22	ENST00000621444.4	954	5	194	-359	0	359	multi-exon	FALSE	canonical	3	254	junction_1	301.062597311589	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTCTCTGCTTTTCTTT	21	True	NA	NA	False	NA	NA	NA	176388568	176383586	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_176384284_176385220_176385328_176386839_176386910_176388234_176388344_176388432
H1_mix_00071572	chr5	-	1235	5	FSM	ENSG00000048162.22	ENST00000618911.4	1087	5	-65	-83	-65	48	multi-exon	FALSE	canonical	3	55	junction_1	387.077188684634	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCCGGTGAAAACCACCT	9052	False	NA	37	True	NA	NA	NA	176388992	176383897	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_176384287_176385220_176385328_176386839_176386910_176388234_176388344_176388432
H1_mix_00071573	chr5	-	889	5	FSM	ENSG00000048162.22	ENST00000614830.5	881	5	0	-8	0	8	multi-exon	FALSE	canonical	3	727	junction_1	97.7177056627917	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATTTTGTATTTTTCTGC	-9	True	NA	-3	True	AATAAA	-23	NA	176388598	176383937	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_176384375_176385220_176385328_176386839_176386910_176388234_176388344_176388432
H1_mix_00071574	chr5	-	1000	4	FSM	ENSG00000048162.22	ENST00000509257.1	1000	4	0	0	0	0	multi-exon	FALSE	canonical	3	929	junction_3	23.6267268622258	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTAATTTATTGTTTTTG	21	True	NA	NA	False	NA	NA	NA	176388568	176384642	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_176385328_176386839_176386910_176388234_176388344_176388432
H1_mix_00071576	chr5	-	1108	5	FSM	ENSG00000175416.16	ENST00000345807.7	1085	5	0	-23	0	23	multi-exon	FALSE	canonical	3	260	junction_3	4.74341649025257	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTCACTTCTCTGGAAG	-5	True	NA	-26	True	NA	NA	NA	176416539	176392477	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_176392946_176397606_176397719_176397929_176398048_176410256_176410304_176416176
H1_mix_00071578	chr5	-	1489	6	FSM	ENSG00000175416.16	ENST00000510734.5	1489	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	131.080128165943	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCGCTGGGAGGGGGGCC	-5	True	NA	NA	False	NA	NA	NA	176416539	176392648	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_176392946_176397606_176397719_176397929_176398048_176406156_176406709_176410256_176410304_176416176
H1_mix_00071580	chr5	-	4133	11	FSM	ENSG00000146083.12	ENST00000274811.9	4122	11	0	-11	0	11	multi-exon	FALSE	canonical	3	40	junction_9	33.4366565314177	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTTTGGCTGCCCGTG	-6	True	NA	-5	True	AATAAA	-29	NA	176537402	176526700	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_176529091_176529287_176529388_176529522_176529645_176529730_176529819_176530081_176530207_176530581_176530744_176530847_176531022_176531462_176531631_176532003_176532194_176532365_176532517_176536939
H1_mix_00071581	chr5	-	3948	11	NIC	ENSG00000146083.12	novel	4122	11	NA	NA	14	10	combination_of_known_junctions	FALSE	canonical	3	57	junction_4	28.9981033862561	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTGCCTTTGGCTGCCCGT	37	True	NA	-6	True	AATAAA	-28	NA	176537282	176526701	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_176529091_176529287_176529388_176529522_176529645_176529730_176529819_176530081_176530207_176530581_176530744_176530847_176531022_176531462_176531631_176532003_176532130_176532365_176532517_176536939
H1_mix_00071582	chr5	-	3791	11	NIC	ENSG00000146083.12	novel	4122	11	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_10	36.4945201365904	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACCGCCCACGCTGCCTTT	-12	True	NA	-16	True	AATAAA	-18	NA	176537862	176526711	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_176529091_176529287_176529388_176529522_176529645_176529730_176529819_176530081_176530207_176530581_176530744_176530847_176531022_176531462_176531631_176532003_176532194_176532365_176532517_176537730
H1_mix_00071584	chr5	-	4236	2	FSM	ENSG00000169258.7	ENST00000303991.5	4234	2	0	-2	0	2	multi-exon	FALSE	canonical	3	104	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCTGCCGTGATTGGCC	-22	True	NA	-20	True	AATAAA	-15	NA	176610156	176595799	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_176599878_176609998
H1_mix_00071585	chr5	-	4246	3	NNC	ENSG00000169258.7	novel	4234	2	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	52	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGTCTGCCGTGATTGG	NA	False	NA	-22	True	AATAAA	-13	NA	176610192	176595801	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_176599119_176599142_176599878_176609998
H1_mix_00071586	chr5	-	1383	6	FSM	ENSG00000074317.11	ENST00000393693.7	1398	6	0	15	0	-13	multi-exon	FALSE	canonical	3	52	junction_5	15.4867685460848	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCAGGTACAAGACTGGC	3	True	NA	NA	False	NA	NA	NA	176630534	176620096	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_176620844_176621213_176621304_176626397_176626517_176626719_176626762_176629533_176629664_176630279
H1_mix_00071591	chr5	-	521	4	FSM	ENSG00000087206.17	ENST00000515488.1	587	4	14	52	14	-52	multi-exon	FALSE	canonical	1	2	junction_3	69.4166166466406	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATATGCCATGTTGCAA	NA	False	NA	NA	False	NA	NA	NA	177022619	176970741	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_176970867_176975395_176975481_176982468_176982624_177022463
H1_mix_00071592	chr5	-	1867	1	FSM	ENSG00000270706.1	ENST00000604252.1	1009	1	-20	-838	-20	838	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCGGCCAAAAGGGCCT	NA	False	NA	NA	False	NA	NA	NA	177266608	177264741	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177264700_177266600
H1_mix_00071593	chr5	-	1644	9	NNC	ENSG00000169223.15	novel	1611	8	NA	NA	0	51957	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	814.786695629599	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAAAGCTGATAAGCCAG	-6	True	NA	NA	False	NA	NA	NA	177351668	177279609	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_177279638_177331561_177332247_177334283_177334404_177337135_177337251_177337362_177337525_177337705_177337786_177338487_177338606_177351172_177351292_177351451
H1_mix_00071594	chr5	-	1593	8	FSM	ENSG00000169228.14	ENST00000303251.11	1588	8	0	-5	0	5	multi-exon	FALSE	canonical	3	108	junction_3	19.7484176581315	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTCTGACTAGCTCTAC	-17	True	NA	-22	True	AATAAA	-28	NA	177303719	177301192	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177301808_177301924_177301988_177302127_177302179_177302396_177302497_177302576_177302645_177302751_177302831_177303008_177303078_177303171
H1_mix_00071595	chr5	-	1825	7	FSM	ENSG00000169228.14	ENST00000478234.5	1820	7	0	-5	0	5	multi-exon	FALSE	canonical	3	149	junction_1	9.77098880473324	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTCTGACTAGCTCTAC	4	True	NA	-22	True	AATAAA	-28	NA	177303733	177301192	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177301808_177301924_177301988_177302127_177302497_177302576_177302645_177302751_177302831_177303008_177303078_177303171
H1_mix_00071596	chr5	-	1236	9	FSM	ENSG00000169228.14	ENST00000393611.6	1236	9	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_8	41.6876405544857	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCCCCTTTCCCTGCTG	-4	True	NA	-5	True	AATAAA	-22	NA	177303706	177301450	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177301808_177301924_177301988_177302127_177302179_177302396_177302497_177302576_177302645_177302751_177302831_177303008_177303078_177303171_177303321_177303406
H1_mix_00071598	chr5	-	1534	5	FSM	ENSG00000213347.11	ENST00000423571.6	1534	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_4	4.65698400254929	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCCCCGGGCAAGTCACC	14	True	NA	NA	False	NA	NA	NA	177311895	177306816	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177307965_177310425_177310541_177310667_177310698_177311378_177311485_177311760
H1_mix_00071599	chr5	-	1857	4	FSM	ENSG00000213347.11	ENST00000503782.1	1854	4	0	-3	0	3	multi-exon	FALSE	canonical	3	86	junction_1	5.31245915016974	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCCATAGTCTTGCCTAAT	395	False	NA	-4	True	ATTAAA	-20	NA	177311875	177307204	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177307704_177307780_177307965_177310425_177311485_177311760
H1_mix_00071600	chr5	-	1483	6	FSM	ENSG00000213347.11	ENST00000439742.7	1067	6	-411	-5	-411	3	multi-exon	FALSE	canonical	3	86	junction_1	6.43117407632541	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCCATAGTCTTGCCTAAT	NA	False	NA	-4	True	ATTAAA	-20	NA	177312309	177307204	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177307704_177307780_177307965_177310425_177310541_177310667_177310698_177311378_177311485_177311760
H1_mix_00071601	chr5	-	1111	7	NNC	ENSG00000213347.11	novel	861	7	NA	NA	-273	-1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_6	32.1437742373577	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCGTCCATAGTCTTGCC	99	False	NA	-8	True	ATTAAA	-16	NA	177312171	177307208	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_177307704_177307780_177307965_177310425_177310541_177310667_177310698_177311378_177311485_177311760_177311891_177312120
H1_mix_00071602	chr5	-	1215	7	NNC	ENSG00000213347.11	novel	861	7	NA	NA	-410	-1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_6	30.679345205239	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCGTCCATAGTCTTGCC	NA	False	NA	-8	True	ATTAAA	-16	NA	177312308	177307208	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_177307704_177307780_177307965_177310425_177310541_177310667_177310698_177311378_177311485_177311760_177311858_177312120
H1_mix_00071603	chr5	-	1611	8	FSM	ENSG00000169223.15	ENST00000303127.12	1611	8	0	0	0	0	multi-exon	FALSE	canonical	3	2229	junction_4	150.905701059453	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGCCGTGTGACTGTCC	-6	True	NA	-32	True	AATAAA	-14	NA	177351668	177331566	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177332247_177334283_177334404_177337135_177337251_177337362_177337525_177337705_177337786_177338487_177338606_177351172_177351292_177351451
H1_mix_00071606	chr5	-	1499	5	FSM	ENSG00000131187.10	ENST00000502854.5	1480	5	0	-19	0	0	multi-exon	FALSE	canonical	3	16	junction_4	21.3131414859471	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGAAAGCTCTTTTCTTC	5107	False	NA	-9	True	AATAAA	-19	NA	177404472	177402140	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177402460_177402549_177402699_177403253_177403398_177403480_177404091_177404195
H1_mix_00071608	chr5	-	1573	4	FSM	ENSG00000131187.10	ENST00000510358.5	1573	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	15.6418242755334	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAACTCAATAAAGTGCTTT	5107	False	NA	-40	True	NA	NA	NA	177404472	177402171	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177402460_177402549_177402699_177403253_177403398_177403480
H1_mix_00071611	chr5	-	3186	14	FSM	ENSG00000113758.14	ENST00000309007.9	2995	14	119	-310	0	310	multi-exon	FALSE	canonical	3	1339	junction_6	129.320207146182	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCCTCCGCTTGTACCAA	13	True	NA	NA	False	NA	NA	NA	177473622	177456297	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177457504_177457654_177457758_177458057_177458708_177459097_177459269_177460431_177460556_177460643_177460704_177466771_177466836_177466910_177467063_177467254_177467333_177467480_177467628_177467742_177467818_177468107_177468221_177468843_177468900_177473435
H1_mix_00071612	chr5	-	2674	13	FSM	ENSG00000113758.14	ENST00000472831.5	2667	13	0	-7	0	0	multi-exon	FALSE	canonical	3	1339	junction_6	131.32495214374	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCCCTCCCCGCCCTTCT	11	True	NA	-16	True	AATAAA	-26	NA	177473624	177456926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177457504_177457654_177457758_177458057_177458708_177459097_177459269_177460431_177460556_177460643_177460704_177466771_177466836_177466910_177467063_177467254_177467333_177467480_177467818_177468107_177468221_177468843_177468900_177473435
H1_mix_00071613	chr5	-	1044	10	FSM	ENSG00000113758.14	ENST00000477391.6	1044	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_8	448.126084550231	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTCCTAGGCCCCACCCC	22	True	NA	NA	False	NA	NA	NA	177473613	177460431	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177460556_177460643_177460704_177466771_177466836_177466910_177467063_177467254_177467333_177467480_177467628_177467742_177467818_177468107_177468218_177468843_177468900_177473435
H1_mix_00071614	chr5	-	1712	13	FSM	ENSG00000196923.14	ENST00000355841.7	1712	13	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_6	124.510262852327	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTGCCCTTCCCCTG	-2	True	NA	-8	True	AATAAA	-17	NA	177497604	177483393	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177483731_177483866_177483983_177484069_177484191_177488067_177488249_177489392_177489628_177489770_177489833_177490869_177490907_177491009_177491147_177491806_177491926_177492404_177492436_177492525_177492678_177496416_177496524_177497527
H1_mix_00071615	chr5	-	982	9	NIC	ENSG00000196923.14	novel	977	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	109	junction_3	193.039463258164	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTCTGCCTGTCTTCTA	5088	False	NA	-19	True	AATAAA	-15	NA	177497561	177490245	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_177490594_177490869_177490907_177491009_177491147_177491403_177491421_177491806_177491926_177492404_177492436_177492525_177492678_177496416_177496524_177497527
H1_mix_00071619	chr5	-	686	3	FSM	ENSG00000183258.12	ENST00000512334.5	686	3	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_1	0.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGCCCTGCCTCTGTG	4467	False	NA	-17	True	ATTAAA	-19	NA	177512545	177511576	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177511928_177512095_177512207_177512321
H1_mix_00071620	chr5	-	1587	11	FSM	ENSG00000183258.12	ENST00000507900.5	1564	11	0	-23	0	0	multi-exon	FALSE	canonical	3	279	junction_9	33.0962233495002	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGCCCTGCCTCTGTG	1679	False	NA	-17	True	ATTAAA	-19	NA	177515333	177511576	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177511928_177512095_177512207_177512321_177512394_177512495_177512646_177512779_177512877_177513010_177513083_177513352_177513485_177513684_177513848_177514700_177514838_177514915_177515070_177515185
H1_mix_00071622	chr5	-	2094	16	FSM	ENSG00000183258.12	ENST00000652623.1	2094	16	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_11	35.4329413587601	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTACTGTTTTTGTTTC	78	False	NA	-78	True	NA	NA	NA	177516934	177511637	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177511928_177512095_177512207_177512321_177512394_177512495_177512646_177512779_177512877_177513010_177513083_177513352_177513485_177513684_177513848_177514700_177514838_177514915_177515070_177515185_177515259_177515684_177515822_177515928_177515990_177516118_177516194_177516287_177516448_177516724
H1_mix_00071623	chr5	-	1926	6	FSM	ENSG00000146067.16	ENST00000524677.5	1916	6	0	-10	0	7	multi-exon	FALSE	canonical	3	61	junction_5	77.8650113979315	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTGATTTGTGGGTCT	4203	False	NA	7	True	GATAAA	-26	NA	177532533	177519781	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177520182_177521973_177522072_177523956_177524033_177524184_177525206_177531281_177531522_177532442
H1_mix_00071624	chr5	-	2246	8	FSM	ENSG00000146067.16	ENST00000510163.5	2237	8	0	-9	0	7	multi-exon	FALSE	canonical	3	13	junction_6	95.1853187101834	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTGATTTGTGGGTCT	346	False	NA	7	True	GATAAA	-26	NA	177536390	177519781	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177520182_177521973_177522072_177523956_177524033_177524184_177525206_177531281_177531522_177531952_177532132_177532442_177532642_177536357
H1_mix_00071628	chr5	-	3175	10	NIC	ENSG00000146067.16	novel	4604	12	NA	NA	12	1	combination_of_known_junctions	FALSE	canonical	3	61	junction_5	69.1307581934052	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCATGTTGGTGATTTGT	30	False	NA	1	True	GATAAA	-20	NA	177554529	177519787	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_177520182_177521973_177522072_177523956_177524033_177524184_177525206_177531281_177531522_177532442_177532642_177536357_177536746_177537872_177538108_177538904_177539148_177554248
H1_mix_00071631	chr5	-	1928	4	FSM	ENSG00000246596.7	ENST00000500444.3	1805	4	-123	0	-63	0	multi-exon	FALSE	canonical	3	5	junction_2	3.55902608401044	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAACAACAATTATAAGATT	NA	False	NA	NA	False	NA	NA	NA	177672272	177626435	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177626506_177627381_177627615_177631365_177632739_177672020
H1_mix_00071632	chr5	-	618	3	FSM	ENSG00000145912.9	ENST00000314397.8	599	3	0	-19	0	0	multi-exon	FALSE	canonical	3	278	junction_1	2489	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGAGTCTGTGGGTGT	110	False	NA	NA	False	AGTAAA	-15	NA	178153829	178149462	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_178149839_178153490_178153561_178153657
H1_mix_00071639	chr5	-	3724	13	FSM	ENSG00000113240.14	ENST00000520878.5	3722	13	0	-2	0	2	multi-exon	FALSE	canonical	3	19	junction_11	27.6962693035241	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTGTTGTTGTTCTTT	3525	False	178627111	-3	True	CATAAA	-16	NA	178627088	178602661	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_178603758_178603843_178603935_178605302_178605383_178608375_178608459_178612415_178612546_178612795_178612891_178613472_178613640_178613726_178613844_178616881_178616949_178617343_178618779_178619837_178619897_178623255_178623417_178626945
H1_mix_00071640	chr5	-	2543	14	NIC	ENSG00000113240.14	novel	3722	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_12	28.9193942008948	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTTTGTTGTTGTTGTTCT	24	True	NA	-5	True	CATAAA	-14	NA	178627030	178602663	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_178603758_178603843_178603935_178605302_178605383_178608375_178608459_178612415_178612546_178612795_178612891_178613472_178613640_178613726_178613844_178616881_178616949_178617343_178617435_178618555_178618779_178619837_178619897_178623255_178623417_178626945
H1_mix_00071641	chr5	-	2394	12	NIC	ENSG00000113240.14	novel	2504	13	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	63	junction_10	13.4557738996934	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTGTTGTTGTTGTTCTT	24	True	NA	-4	True	CATAAA	-15	NA	178627030	178602662	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_178603758_178603843_178603935_178605302_178605383_178608375_178608459_178612415_178612546_178612795_178612891_178613472_178613640_178613726_178613844_178616881_178616949_178618555_178618779_178623255_178623417_178626945
H1_mix_00071642	chr5	-	1316	3	FSM	ENSG00000113240.14	ENST00000520126.1	1316	3	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	11	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACTTCAATTAAATCAGTA	2	True	NA	NA	False	AGTAAA	-27	NA	178627052	178617730	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_178618779_178623255_178623417_178626945
H1_mix_00071646	chr5	-	4059	4	FSM	ENSG00000169131.13	ENST00000520331.5	766	4	-1331	-1962	-55	1	multi-exon	FALSE	canonical	3	123	junction_3	7.93025150224688	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCTTTTGTTCTAGTAG	2	True	NA	-9	True	ATTAAA	-17	NA	178730714	178711510	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_178713622_178725375_178725472_178726998_178727126_178728989
H1_mix_00071647	chr5	-	6783	22	FSM	ENSG00000087116.16	ENST00000251582.12	6783	22	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	7.20544012166771	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCGTTTGTTGTTGTC	-7	True	NA	1	True	ATTAAA	-29	NA	179345461	179110852	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179114325_179121660_179121751_179122643_179122774_179124972_179125181_179125997_179126131_179127958_179128119_179129931_179130099_179132229_179132311_179132776_179132901_179135908_179136043_179137768_179137945_179139889_179140036_179152141_179152256_179153490_179153624_179154048_179154193_179154813_179154920_179158722_179158880_179181071_179181156_179207512_179207716_179272910_179273065_179343766_179344162_179345189
H1_mix_00071649	chr5	-	290	1	FSM	ENSG00000253520.1	ENST00000521868.1	290	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGCTCTTAGAGGCTAAT	3200	False	NA	NA	False	TATAAA	-5	NA	179527513	179527223	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179527200_179527500
H1_mix_00071651	chr5	-	2224	15	NNC	ENSG00000169045.17	novel	2248	14	NA	NA	0	13493	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	150.248365809986	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTACCATCATAGGACAAAT	0	True	NA	NA	False	NA	NA	NA	179623669	179600684	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_179600716_179614181_179614960_179615545_179615596_179616125_179616219_179616868_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036_179623165_179623635
H1_mix_00071652	chr5	-	2043	9	ISM	ENSG00000169045.17	ENST00000514332.5	2444	13	4901	-2	129	0	3prime_fragment	FALSE	canonical	3	464	junction_4	28.0554696093293	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTCTTGTCTGTGCTTC	5822	False	NA	-3	True	AATAAA	-21	NA	179618770	179614177	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_179614960_179615545_179615596_179616125_179616219_179616868_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144
H1_mix_00071653	chr5	-	2076	13	NIC	ENSG00000169045.17	novel	2279	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	75	junction_9	144.755541056868	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTCTTGTCTGTGCTTC	946	False	NA	-3	True	AATAAA	-21	NA	179623646	179614177	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_179614960_179615545_179615596_179616125_179616219_179616868_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179620891_179621036_179621241_179621398_179623036_179623165_179623594
H1_mix_00071654	chr5	-	2165	13	NIC	ENSG00000169045.17	novel	2279	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	113	junction_1	128.381890164549	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTCTTGTCTGTGCTTC	946	False	NA	-3	True	AATAAA	-21	NA	179623646	179614177	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_179614960_179616125_179616219_179616868_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036_179623165_179623594
H1_mix_00071655	chr5	-	2144	14	NIC	ENSG00000169045.17	novel	2279	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_3	144.755701158025	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTCTTGTCTGTGCTTC	946	False	NA	-3	True	AATAAA	-21	NA	179623646	179614177	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_179614960_179615545_179615596_179616125_179616219_179616898_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036_179623165_179623635
H1_mix_00071656	chr5	-	2279	14	FSM	ENSG00000169045.17	ENST00000393432.8	2279	14	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_13	94.2513949169294	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTCTTGTCTGTGCTTC	882	False	NA	-3	True	AATAAA	-21	NA	179623710	179614177	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179614960_179615545_179615596_179616125_179616219_179616868_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036_179623165_179623594
H1_mix_00071657	chr5	-	5565	4	FSM	ENSG00000169045.17	ENST00000515481.5	5564	4	0	-1	0	0	multi-exon	FALSE	canonical	3	493	junction_3	20.8859335970941	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGTCTTGTCTGTGCTT	4560	False	NA	-4	True	AATAAA	-20	NA	179620032	179614178	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179617650_179617798_179617933_179617988_179618061_179618144
H1_mix_00071658	chr5	-	2116	12	FSM	ENSG00000169045.17	ENST00000329433.10	2114	12	0	-2	0	0	multi-exon	FALSE	canonical	3	113	junction_1	113.561357063844	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGTCTTGTCTGTGCTT	1424	False	NA	-4	True	AATAAA	-20	NA	179623168	179614178	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179614960_179616125_179616219_179616868_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036
H1_mix_00071659	chr5	-	2199	14	NIC	ENSG00000169045.17	novel	2248	14	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_3	153.332951718932	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGTCTTGTCTGTGCTT	6	True	NA	-4	True	AATAAA	-20	NA	179623663	179614178	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_179614960_179615545_179615596_179616125_179616219_179616859_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036_179623165_179623635
H1_mix_00071660	chr5	-	2445	13	FSM	ENSG00000169045.17	ENST00000514332.5	2444	13	0	-1	0	0	multi-exon	FALSE	canonical	3	189	junction_12	97.8862718782477	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGTCTTGTCTGTGCTT	-2	True	NA	-4	True	AATAAA	-20	NA	179623671	179614178	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179614960_179615545_179615596_179616125_179616219_179616868_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621398_179623036_179623165_179623594
H1_mix_00071661	chr5	-	3459	13	FSM	ENSG00000169045.17	ENST00000356731.9	3667	13	208	0	-50	0	multi-exon	FALSE	canonical	3	374	junction_12	55.3609368899528	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGTCTTGTCTGTGCTT	131	False	NA	-4	True	AATAAA	-20	NA	179624461	179614178	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179614960_179615545_179615596_179616125_179616219_179616868_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036
H1_mix_00071667	chr5	-	2385	15	FSM	ENSG00000161013.17	ENST00000292591.12	2365	15	0	-20	0	7	multi-exon	FALSE	canonical	1	109	junction_11	68.0267429405674	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGGGCATCTCCCTCTG	-12	True	NA	-27	True	AATAAA	-33	NA	179806866	179797589	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179798069_179798164_179798278_179798346_179798435_179798512_179798592_179798927_179799122_179799202_179799311_179799505_179799637_179799953_179800069_179800183_179800260_179800483_179800598_179800906_179800954_179801333_179801468_179801553_179801695_179801783_179801970_179806486
H1_mix_00071673	chr5	-	2879	9	FSM	ENSG00000161010.16	ENST00000522663.5	2879	9	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_7	59.4280026586794	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCCTGTCTGGGATGTGAG	0	True	NA	NA	False	NA	NA	NA	179858860	179835132	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179837205_179837759_179837886_179840871_179840960_179841906_179842065_179844151_179844228_179847977_179848067_179853196_179853277_179853377_179853438_179858730
H1_mix_00071674	chr5	-	902	6	FSM	ENSG00000161010.16	ENST00000520698.5	902	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	65.5145785302783	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCACCCAGGAAACATCAG	18	True	NA	NA	False	NA	NA	NA	179858797	179836801	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179837205_179837759_179837886_179840871_179840960_179841906_179842065_179853377_179853438_179858730
H1_mix_00071675	chr5	-	1178	7	FSM	ENSG00000161010.16	ENST00000292586.11	1168	7	0	-10	0	0	multi-exon	FALSE	canonical	3	89	junction_1	28.7851234726088	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAACGTCATTGGTTAAA	-2	True	NA	-3	True	AATAAA	-25	NA	179858817	179837265	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179837886_179840871_179840960_179841906_179842065_179844151_179844228_179847977_179848067_179853377_179853438_179858730
H1_mix_00071677	chr5	-	4155	6	FSM	ENSG00000161010.16	ENST00000518219.5	4145	6	0	-10	0	0	multi-exon	FALSE	canonical	3	122	junction_4	21.2790977252326	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAACGTCATTGGTTAAA	7	True	NA	-3	True	AATAAA	-25	NA	179858808	179837265	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179840960_179841906_179842065_179844151_179844228_179847977_179848067_179853377_179853438_179858730
H1_mix_00071687	chr5	-	9945	8	FSM	ENSG00000113269.14	ENST00000522208.6	9945	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	313.049060509234	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGACCACATGGAGTATTG	22	True	NA	-4	True	AATAAA	-20	NA	180071721	179911650	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179920427_179966805_179967011_179970409_179970507_179978202_179978286_179980128_179980201_180013060_180013312_180040452_180040648_180071455
H1_mix_00071688	chr5	-	1903	9	FSM	ENSG00000113269.14	ENST00000521389.6	1904	9	0	1	0	-1	multi-exon	FALSE	canonical	3	763	junction_1	57.0920309675527	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAATGAGTGTCAAAATGA	-16	True	NA	NA	False	AATAAA	-15	NA	180071759	179955067	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179955670_179963470_179963565_179966805_179967011_179970409_179970507_179978202_179978286_179980128_179980201_180013060_180013312_180040452_180040648_180071455
H1_mix_00071693	chr5	-	4334	12	FSM	ENSG00000050748.18	ENST00000393360.7	4326	12	0	-8	0	8	multi-exon	FALSE	canonical	3	59	junction_1	74.3154989785425	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCCAATTTTTGTGTGTT	17	True	NA	-6	True	GATAAA	-9	NA	180292056	180233585	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_180236532_180238331_180238404_180239923_180239988_180241030_180241156_180242572_180242756_180247438_180247511_180248972_180249139_180261683_180261823_180264780_180264840_180269279_180269410_180280439_180280609_180291847
H1_mix_00071694	chr5	-	4344	12	FSM	ENSG00000050748.18	ENST00000455781.5	4336	12	0	-8	0	8	multi-exon	FALSE	canonical	1	5	junction_5	117.549286304698	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCCAATTTTTGTGTGTT	2	True	NA	-6	True	GATAAA	-9	NA	180292071	180233585	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_180236527_180238331_180238404_180239923_180239988_180241030_180241156_180242572_180242756_180247854_180247927_180248972_180249139_180261683_180261823_180264780_180264840_180269279_180269410_180280439_180280609_180291847
H1_mix_00071696	chr5	-	2275	7	FSM	ENSG00000050748.18	ENST00000425491.6	2266	7	0	-9	0	9	multi-exon	FALSE	canonical	3	291	junction_5	15.4164414397962	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAATGTCAGTAATTAATA	675	False	NA	NA	False	ATTAAA	-22	NA	180291967	180246018	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_180247511_180248972_180249139_180261683_180261823_180264780_180264840_180269279_180269410_180280439_180280609_180291847
H1_mix_00071697	chr5	-	3034	19	FSM	ENSG00000131459.13	ENST00000253778.13	3034	19	0	0	0	0	multi-exon	FALSE	canonical	1	226	junction_9	110.06053328807	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTGTTTGCATTTT	-9	True	NA	-29	True	AATAAA	-15	NA	180353336	180300697	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_180301609_180302422_180302585_180304771_180304940_180307175_180307304_180312429_180312545_180313806_180313965_180316340_180316462_180316763_180316862_180316962_180317059_180318792_180318957_180324187_180324306_180324815_180324896_180328276_180328339_180330699_180330835_180331494_180331554_180335827_180335954_180336478_180336578_180338492_180338601_180353210
H1_mix_00071698	chr5	-	435	2	FSM	ENSG00000131459.13	ENST00000510122.1	515	2	59	21	59	-21	multi-exon	FALSE	canonical	3	544	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGGGATGTGGGGAGGC	6630	False	NA	NA	False	GGGGCT	-25	NA	180324305	180318639	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_180318957_180324187
H1_mix_00071699	chr5	-	755	6	FSM	ENSG00000131459.13	ENST00000518906.1	697	6	0	-58	0	58	multi-exon	FALSE	canonical	3	544	junction_1	40.9458178572611	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGCGCCTGGTGGAGCTCC	7252	False	NA	NA	False	NA	NA	NA	180331648	180318750	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_180318957_180324187_180324306_180324815_180324896_180328276_180328339_180330699_180330835_180331494
H1_mix_00071700	chr5	-	695	2	FSM	ENSG00000161055.4	ENST00000512120.1	714	2	6	13	6	-13	multi-exon	FALSE	canonical	1	2	junction_1	0	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTTAAGAGCAGCTCGAG	4543	False	NA	NA	False	AATAAA	-2	NA	180591157	180590117	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_180590255_180590599
H1_mix_00071702	chr5	-	4506	30	FSM	ENSG00000037280.16	ENST00000393347.7	4292	30	0	-214	0	214	multi-exon	TRUE	canonical	2	5	junction_27	15.7839154119398	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACTGATAATGTCCATG	-1	True	NA	-16	True	ATTAAA	-24	NA	180649624	180607750	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_180608285_180608967_180609054_180609904_180610026_180611330_180611480_180612505_180612612_180613010_180613111_180614067_180614180_180616366_180616490_180616899_180616995_180618769_180618921_180619020_180619110_180619252_180619367_180619664_180619770_180620172_180620309_180620608_180620716_180620875_180621008_180621105_180621253_180621541_180621905_180622730_180622840_180623934_180624062_180625868_180626032_180626110_180626266_180628881_180629000_180629258_180629428_180629695_180629836_180629942_180630106_180630224_180630338_180630554_180630800_180631681_180631779_180649487
H1_mix_00071706	chr5	-	8442	2	FSM	ENSG00000131446.17	ENST00000307826.5	8445	2	0	3	0	-1	multi-exon	FALSE	canonical	3	368	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGCCCTGCCCAGATTAAC	4	True	NA	NA	False	AATAAA	-23	NA	180802806	180784782	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_180793098_180802679
H1_mix_00071707	chr5	-	3175	3	FSM	ENSG00000131446.17	ENST00000446023.6	3175	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	105.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATTTATGTGTGTGT	16	True	NA	-9	True	AATAAA	-15	NA	180809829	180790547	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_180793098_180808647_180809077_180809633
H1_mix_00071708	chr5	-	3077	3	FSM	ENSG00000131446.17	ENST00000393340.7	3077	3	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_2	37.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATTTATGTGTGTGT	-22	True	NA	-9	True	AATAAA	-15	NA	180810137	180790547	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_180793098_180808647_180809077_180810039
H1_mix_00071712	chr5	-	1653	1	FSM	ENSG00000278970.3	ENST00000623091.1	1652	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTATTTTCTTTGGTAT	4	True	NA	0	True	AGTAAA	-22	NA	180831605	180829952	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_180830000_180831600
H1_mix_00071714	chr5	-	4034	2	NNC	ENSG00000196670.14	novel	3941	2	NA	NA	52	0	intron_retention	FALSE	canonical	2	12	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCTGTGAGTTTAGATGG	152	False	NA	-3	True	AATAAA	-20	NA	180861224	180847610	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_180851494_180861073
H1_mix_00071716	chr5	-	4406	3	NNC	ENSG00000196670.14	novel	542	3	NA	NA	-190	-2	intron_retention	FALSE	canonical	3	18	junction_2	31.5	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAACGGGCTGTGAGTTT	NA	False	NA	-9	True	AATAAA	-14	NA	180861475	180847616	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_180851494_180860527_180860655_180861073
H1_mix_00071719	chr5	-	1140	8	FSM	ENSG00000204628.12	ENST00000512805.6	1140	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	3596.42693431655	2330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATTCTATCTACATTG	0	True	NA	12	True	NA	NA	NA	181243906	181236896	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181241491_181241640_181242173_181242346_181243691
H1_mix_00071720	chr5	-	891	2	FSM	ENSG00000204628.12	ENST00000509148.1	888	2	0	-3	0	0	multi-exon	FALSE	canonical	3	10650	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTTTTTTTTTCTTATA	6000	False	NA	-17	True	AATAAA	-24	NA	181238195	181236925	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_181237720_181238098
H1_mix_00071721	chr5	-	793	3	FSM	ENSG00000204628.12	ENST00000514455.5	791	3	0	-2	0	0	multi-exon	FALSE	canonical	3	8280	junction_1	1185	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTTTTTTTTTCTTATA	5532	False	NA	-17	True	AATAAA	-24	NA	181238663	181236925	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_181237043_181237608_181237720_181238098
H1_mix_00071722	chr5	-	646	6	FSM	ENSG00000204628.12	ENST00000502905.5	643	6	0	-3	0	0	multi-exon	FALSE	canonical	0	0	junction_5	4740.85214281146	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTTTTTTTTTCTTATA	-3	True	NA	-17	True	AATAAA	-24	NA	181242206	181236925	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239486_181239583_181241491_181241640_181242173
H1_mix_00071723	chr5	-	1098	8	FSM	ENSG00000204628.12	ENST00000504325.5	1098	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	3590.95048528312	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTTTTTTTTTCTTATA	306	False	NA	-17	True	AATAAA	-24	NA	181243889	181236925	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181241491_181241640_181242169_181242346_181243691
H1_mix_00071725	chr5	-	990	6	FSM	ENSG00000204628.12	ENST00000504128.5	990	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	4140.13103174284	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGACTTTTAGGTTTT	-12	True	NA	23	True	AATAAA	-13	NA	181241639	181236936	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_181237320_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181241491
H1_mix_00071726	chr5	-	1208	9	FSM	ENSG00000204628.12	ENST00000508682.5	1208	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	4810.38724402724	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGACTTTTAGGTTTT	4	True	NA	23	True	AATAAA	-13	NA	181243902	181236936	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181240215_181240328_181241491_181241640_181242173_181242346_181243691
H1_mix_00071727	chr5	-	1651	7	FSM	ENSG00000204628.12	ENST00000513060.5	1651	7	0	0	0	0	multi-exon	FALSE	canonical	3	8280	junction_1	807.155223953581	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTACAAATAAAAAAAAAAC	248	False	NA	-1	True	NA	NA	NA	181243947	181236960	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181241491_181242346_181243691
H1_mix_00071728	chr5	-	1439	5	FSM	ENSG00000204628.12	ENST00000514183.5	1439	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4471.52610274166	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAACACCTTTACACGCTA	453	False	NA	NA	False	NA	NA	NA	181243742	181238205	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_181239178_181239486_181239583_181241491_181241640_181242173_181242346_181243691
H1_mix_00071732	chr5	-	4753	1	FSM	ENSG00000183718.6	ENST00000612671.1	4753	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATCGGC	-7	True	NA	NA	False	AATAGA	-16	NA	181261139	181256386	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_181256400_181261100
H1_mix_00071733	chr5	-	1185	2	FSM	ENSG00000183718.6	ENST00000510796.2	2801	2	7	1609	0	-622	multi-exon	FALSE	canonical	1	2	junction_1	0	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCATTCATCACTCTGC	-7	True	NA	NA	False	NA	NA	NA	181261139	181257008	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_181257055_181260000
H1_mix_00071734	chr5	+	222	1	Intergenic	novelGene_1130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	318	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCGATCTCCTGACCTT	2773	False	NA	NA	False	NA	NA	NA	1347978	1348200	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_1348000_1348200
H1_mix_00071735	chr5	+	228	1	Intergenic	novelGene_1133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAAGTCCCACAATTAGC	NA	False	NA	NA	False	NA	NA	NA	5519118	5519346	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_5519100_5519300
H1_mix_00071736	chr5	+	266	1	Intergenic	novelGene_1134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACATGCCCAGATGGCCT	NA	False	NA	NA	False	NA	NA	NA	5520496	5520762	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_5520500_5520800
H1_mix_00071740	chr5	+	270	1	Intergenic	novelGene_1153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTGTCTAAGTTGGCAC	NA	False	NA	NA	False	AAAAAG	-14	NA	18671609	18671879	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_18671600_18671900
H1_mix_00071741	chr5	+	295	1	Intergenic	novelGene_1154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAGTCACCCTTGAAG	NA	False	NA	NA	False	NA	NA	NA	57137921	57138216	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_57137900_57138200
H1_mix_00071745	chr5	+	298	1	Intergenic	novelGene_1159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCTGTACATAAGCCTA	NA	False	NA	NA	False	NA	NA	NA	74835324	74835622	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_74835300_74835600
H1_mix_00071746	chr5	+	632	1	Intergenic	novelGene_1160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTTAAAGACAAGATCAC	NA	False	NA	NA	False	ATTAAA	-44	NA	76170084	76170716	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_76170100_76170700
H1_mix_00071747	chr5	+	288	1	Intergenic	novelGene_1161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTTAAATGAAAATGGCAGA	NA	False	NA	NA	False	NA	NA	NA	76241182	76241470	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_76241200_76241500
H1_mix_00071748	chr5	+	1013	1	Intergenic	novelGene_1163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCAATCGTGTCCCACT	NA	False	NA	NA	False	CATAAA	-16	NA	76359806	76360819	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_76359800_76360800
H1_mix_00071749	chr5	+	448	1	Intergenic	novelGene_1165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGCTTGAAGCAGCCCTGA	NA	False	NA	NA	False	NA	NA	NA	76362050	76362498	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_76362000_76362500
H1_mix_00071750	chr5	+	220	1	Intergenic	novelGene_1171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCGGAAGCCCCCTAGACC	NA	False	NA	NA	False	NA	NA	NA	84700744	84700964	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_84700700_84701000
H1_mix_00071752	chr5	+	2186	1	Intergenic	novelGene_1173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGCA	NA	False	NA	NA	False	TATAAA	-43	NA	90795108	90797294	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_90795100_90797300
H1_mix_00071753	chr5	+	252	1	Intergenic	novelGene_1174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCTCTCCCTGCTGATCG	NA	False	NA	NA	False	CATAAA	-7	NA	92827162	92827414	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_92827200_92827400
H1_mix_00071754	chr5	+	223	1	Intergenic	novelGene_1176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACAGGCCCCTGTACAGA	NA	False	NA	NA	False	NA	NA	NA	98577559	98577782	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_98577600_98577800
H1_mix_00071755	chr5	+	709	1	Intergenic	novelGene_1182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAAAGCCTGTTTAGTGG	NA	False	NA	NA	False	AATAAA	-15	NA	108554266	108554975	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_108554300_108555000
H1_mix_00071757	chr5	+	1471	1	Intergenic	novelGene_1186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	256	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATATCACAAACCTTAGC	NA	False	NA	NA	False	TATAAA	-31	NA	115914854	115916325	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_115914900_115916300
H1_mix_00071758	chr5	+	811	1	Intergenic	novelGene_1187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATTGTCTAAGTTGGCA	NA	False	NA	NA	False	NA	NA	NA	118949426	118950237	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_118949400_118950200
H1_mix_00071759	chr5	+	513	1	Intergenic	novelGene_1190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGACGACTTGATGTCT	NA	False	NA	NA	False	TATAAA	-11	NA	122474453	122474966	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_122474500_122475000
H1_mix_00071761	chr5	+	327	1	Intergenic	novelGene_1192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	346	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGGGAGAAGAAGGAGGA	NA	False	NA	NA	False	NA	NA	NA	122477720	122478047	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_122477700_122478000
H1_mix_00071762	chr5	+	1439	1	Intergenic	novelGene_1202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCAGGCATGGTGGCAG	NA	False	NA	NA	False	ACTAAA	-22	NA	132929518	132930957	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_132929500_132931000
H1_mix_00071763	chr5	+	1960	1	Intergenic	novelGene_1210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGGGGTACAAGAGTCAAG	NA	False	NA	NA	False	NA	NA	NA	141850392	141852352	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_141850400_141852400
H1_mix_00071764	chr5	+	443	1	Intergenic	novelGene_1212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTCGACCAAGCCCAAGGA	1571	False	NA	NA	False	NA	NA	NA	143334160	143334603	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_143334200_143334600
H1_mix_00071768	chr5	+	313	1	Intergenic	novelGene_1216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCAAGATTGAAAGGAGAAA	NA	False	NA	NA	False	AATGAA	-41	NA	180419539	180419852	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_180419500_180419900
H1_mix_00071769	chr5	+	4205	1	Intergenic	novelGene_1217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCATGTCTGGGATCAGC	NA	False	NA	NA	False	NA	NA	NA	180841940	180846145	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_180841900_180846100
H1_mix_00071770	chr5	+	7528	18	NIC	ENSG00000153404.15	novel	12591	20	NA	NA	-14	2313	intron_retention	FALSE	canonical	2	16	junction_5	85.4649809909213	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTAACGTATCTGCGGTT	1	True	NA	NA	False	AATAAA	-29	NA	92153	184902	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_92277_113250_113449_139482_140717_143046_143257_143379_143504_151512_151600_154874_154992_155344_155444_156070_156211_156772_156912_161782_161945_162721_163549_169339_169593_171042_171445_172896_173068_173917_174099_181513_181676_182003
H1_mix_00071772	chr5	+	2163	14	FSM	ENSG00000073578.18	ENST00000510361.5	2148	14	-15	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	142.908792860772	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTCTTTTATTTCCAA	0	True	NA	NA	False	AATAAA	-13	NA	218302	256679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_218419_223481_223569_224359_224522_225882_226048_228184_228334_230875_231001_233476_233646_235143_235340_236427_236600_240357_240477_250991_251104_251337_251469_254392_254507_256333
H1_mix_00071775	chr5	+	3501	5	FSM	ENSG00000249915.9	ENST00000513582.5	3500	5	-1	0	0	0	multi-exon	FALSE	canonical	3	126	junction_3	285.389645922903	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGGTCTGCCTTCAGCT	0	True	NA	19	True	AATAAA	-13	NA	271623	314969	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_271822_272710_272773_304176_306755_311292_311403_314416
H1_mix_00071776	chr5	+	544	3	FSM	ENSG00000180104.16	ENST00000510441.1	613	3	13	56	12	-56	multi-exon	FALSE	canonical	2	4	junction_2	57.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAGGTGTGAGGCTAGAT	5	True	NA	NA	False	NA	NA	NA	443187	447258	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_443291_446149_446350_447017
H1_mix_00071777	chr5	+	2765	12	FSM	ENSG00000180104.16	ENST00000315013.9	2682	12	-83	0	-83	0	multi-exon	FALSE	canonical	3	163	junction_6	24.0794140671691	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATGAAAACGCCATGCA	2883	False	NA	6	True	ATTAAA	-19	NA	446065	467285	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_446350_447532_447753_453369_454052_456888_457007_457899_458026_459358_459460_461959_462071_462156_462308_464289_464413_465110_465273_465717_465846_466726
H1_mix_00071778	chr5	+	1359	2	FSM	ENSG00000180104.16	ENST00000510028.1	1242	2	-117	0	-117	0	multi-exon	FALSE	canonical	3	173	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCACTCCTGTGTTCTTCA	2982	False	NA	NA	False	AAGAAA	-23	NA	456888	459580	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_458026_459358
H1_mix_00071779	chr5	+	1031	3	FSM	ENSG00000180104.16	ENST00000511015.1	1031	3	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_2	16.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCCTGCAGGACCCAGGT	2362	False	NA	NA	False	NA	NA	NA	461629	464728	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_462071_462156_462308_464289
H1_mix_00071780	chr5	+	477	2	FSM	ENSG00000225138.8	ENST00000606319.1	477	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCCACGGGGTCCCTGCG	2026	False	NA	NA	False	NA	NA	NA	475283	476490	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_475320_476049
H1_mix_00071781	chr5	+	1459	4	FSM	ENSG00000225138.8	ENST00000658225.1	1459	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	9.46337971105226	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTACTGGGTTTATTATA	3150	False	NA	-45	True	NA	NA	NA	476407	480818	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_476564_477243_477466_477805_477850_479781
H1_mix_00071782	chr5	+	597	3	FSM	ENSG00000225138.8	ENST00000607005.6	597	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	12.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTAGAGCCCGCCGGACG	3796	False	NA	NA	False	NA	NA	NA	477053	480006	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_477466_477805_477850_479865
H1_mix_00071783	chr5	+	2960	3	NIC	ENSG00000225138.8	novel	1440	4	NA	NA	118	0	intron_retention	FALSE	canonical	3	51	junction_1	24.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACAAACTCTTTTTTTTA	4182	False	NA	21	True	AATAAA	-22	NA	477439	480884	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_477466_477805_480217_480361
H1_mix_00071784	chr5	+	2910	9	ISM	ENSG00000112877.8	ENST00000264935.6	2366	12	-9	11609	-9	-11299	5prime_fragment	FALSE	canonical	3	104	junction_8	11.0049704679295	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCATTTGAACACACGTG	-15	True	NA	NA	False	TTTAAA	-27	NA	612330	641944	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_612444_618989_619118_620068_620262_624470_624580_633768_633948_635371_635585_637516_637819_639088_639225_640407
H1_mix_00071785	chr5	+	550	1	FSM	ENSG00000247872.2	ENST00000500401.2	656	1	154	-48	154	48	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGATAAAAATAACTTAAAAT	NA	False	NA	NA	False	NA	NA	NA	816499	817049	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_816500_817000
H1_mix_00071786	chr5	+	571	4	FSM	ENSG00000071539.14	ENST00000510412.5	571	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	186.233425809893	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACGTGCCATTTCATTTA	2085	False	NA	NA	False	TATAAA	-29	NA	914558	919357	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_914578_915903_915974_917007_917152_919019
H1_mix_00071787	chr5	+	1940	11	FSM	ENSG00000145506.14	ENST00000274150.4	1940	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_9	7.73369252039412	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCCCTGGAGTGCGCAA	149	False	NA	19	True	CATAAA	-20	NA	1008961	1038682	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_1009083_1009178_1009215_1009480_1009561_1032151_1032213_1033371_1033500_1034234_1034331_1034755_1034904_1035388_1035474_1036256_1036385_1037519_1037699_1037804
H1_mix_00071788	chr5	+	3264	2	FSM	ENSG00000286388.1	ENST00000656081.1	3302	2	38	0	38	0	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTAAGTGTGCAATTCTA	29	True	NA	9	True	TATAAA	-9	NA	1345234	1350786	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_1347453_1349740
H1_mix_00071789	chr5	+	2071	1	NIC	ENSG00000286388.1	novel	3302	2	NA	NA	3507	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGAAAACCCATTCTAAG	3498	False	NA	-3	True	NA	NA	NA	1348703	1350774	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_1348700_1350800
H1_mix_00071790	chr5	+	2608	2	FSM	ENSG00000248994.2	ENST00000669344.1	2692	2	84	0	1	0	multi-exon	FALSE	canonical	3	13	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGTTTTACATTTTAAT	NA	False	NA	NA	False	NA	NA	NA	1931147	1936174	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_1931390_1933808
H1_mix_00071791	chr5	+	839	2	FSM	ENSG00000250056.8	ENST00000660957.2	3954	2	59	3056	26	-465	multi-exon	FALSE	canonical	2	7	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGCAGACCCGTGTCTTC	-3	True	NA	NA	False	NA	NA	NA	6583328	6586139	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_6583802_6585773
H1_mix_00071793	chr5	+	2388	3	NNC	ENSG00000285689.1	novel	536	3	NA	NA	-6758	-3022	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTGTCTTGTCCCCTG	1425	False	NA	3	True	AATAAA	-19	NA	7266033	7273901	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_7266135_7271523_7271629_7271719
H1_mix_00071794	chr5	+	3850	25	NNC	ENSG00000078295.17	novel	756	7	NA	NA	-1502	0	at_least_one_novel_splicesite	TRUE	canonical	3	29	junction_1	146.923142228249	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACAGTGCCTGTATCTTT	NA	False	NA	17	True	ATTAAA	-18	NA	7394635	7827532	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_7394759_7414572_7414771_7520737_7520900_7626166_7626317_7690690_7690840_7695751_7695864_7698246_7698375_7706743_7706903_7707705_7707839_7709210_7709388_7712855_7712900_7717156_7717238_7724544_7724615_7727163_7727262_7743667_7743753_7757448_7757587_7766686_7766807_7772931_7773102_7784364_7784450_7789641_7789801_7802217_7802365_7804584_7804693_7816865_7816981_7820564_7820690_7826718
H1_mix_00071795	chr5	+	4951	25	NIC	ENSG00000078295.17	novel	6645	25	NA	NA	-872	0	combination_of_known_junctions	FALSE	canonical	3	66	junction_19	133.715954908987	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACAGTGCCTGTATCTTT	NA	False	NA	17	True	ATTAAA	-18	NA	7395265	7827532	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_7396507_7414572_7414771_7520737_7520900_7626166_7626317_7690690_7690840_7695751_7695864_7698246_7698375_7706743_7706903_7707705_7707839_7709210_7709388_7712855_7712900_7717156_7717238_7724544_7724615_7727163_7727262_7743667_7743753_7757448_7757587_7766686_7766807_7772931_7773102_7784364_7784450_7789658_7789801_7802217_7802365_7804584_7804693_7816865_7816981_7820564_7820690_7826718
H1_mix_00071796	chr5	+	3985	24	NIC	ENSG00000078295.17	novel	6645	25	NA	NA	13	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_13	146.339571959744	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACAGTGCCTGTATCTTT	31	True	NA	17	True	ATTAAA	-18	NA	7396150	7827532	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_7396507_7414572_7414771_7520737_7520900_7626166_7626317_7690690_7690840_7695751_7695864_7698246_7698375_7706743_7706903_7707705_7707839_7709210_7709388_7712855_7712900_7717156_7717238_7724544_7724615_7743667_7743753_7757448_7757587_7766686_7766807_7772931_7773102_7784364_7784450_7789641_7789801_7802217_7802365_7804584_7804693_7816865_7816981_7820564_7820690_7826718
H1_mix_00071797	chr5	+	3945	24	NIC	ENSG00000078295.17	novel	6645	25	NA	NA	13	0	combination_of_known_splicesites	FALSE	canonical	3	31	junction_15	147.280399470034	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACAGTGCCTGTATCTTT	31	True	NA	17	True	ATTAAA	-18	NA	7396150	7827532	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_7396507_7414572_7414771_7520737_7520900_7626166_7626317_7690690_7690840_7695751_7695864_7698246_7698375_7706743_7706903_7707705_7707839_7709210_7709388_7712855_7712900_7717156_7717238_7724544_7724615_7727163_7727262_7743667_7743753_7766686_7766807_7772931_7773102_7784364_7784450_7789641_7789801_7802217_7802365_7804584_7804693_7816865_7816981_7820564_7820690_7826718
H1_mix_00071798	chr5	+	761	4	NNC	ENSG00000078295.17	novel	6645	25	NA	NA	24	50446	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	235.206292432834	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACGGCCATCTACAATCCA	42	True	NA	NA	False	NA	NA	NA	7396161	7573068	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_7396507_7414572_7414771_7520737_7520900_7573012
H1_mix_00071799	chr5	+	574	3	FSM	ENSG00000124275.15	ENST00000507837.5	574	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	0.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATAACTTCCATCATTCC	9	False	NA	NA	False	AAGAAA	-34	NA	7851185	7862018	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_7851586_7856786_7856893_7861950
H1_mix_00071800	chr5	+	3246	15	NIC	ENSG00000124275.15	novel	3245	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	25	junction_8	64.343307534582	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAAACTTGGTAAGTTT	-19	True	NA	9	True	AATAAA	-22	NA	7869147	7901116	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_7869216_7870769_7870924_7875257_7875376_7877943_7878323_7883154_7883278_7885700_7885855_7886614_7886704_7889094_7889276_7890260_7890413_7891371_7891415_7892726_7892914_7895733_7895853_7896863_7896957_7897064_7897248_7899913
H1_mix_00071803	chr5	+	762	6	FSM	ENSG00000150753.12	ENST00000503454.5	762	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	1645.37711178927	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCTTACCAGAGTCCT	54	False	NA	52	True	NA	NA	NA	10250359	10258535	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_10250446_10254144_10254206_10254765_10254839_10255954_10256154_10258110_10258304_10258385
H1_mix_00071805	chr5	+	11444	1	Genic_Genomic	ENSG00000248131.6	novel	NA	NA	NA	NA	529	5245	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATCATTGTCCCTCCTGCT	NA	False	NA	NA	False	NA	NA	NA	12649492	12660936	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr5_+_12649500_12660900
H1_mix_00071806	chr5	+	605	4	FSM	ENSG00000038382.21	ENST00000505971.5	605	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	3.68178700572909	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTTTACTAAAAGCTATT	77	False	NA	NA	False	ACTAAA	-10	NA	14143701	14287104	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_14143883_14270824_14270900_14280321_14280437_14286870
H1_mix_00071807	chr5	+	1198	3	FSM	ENSG00000038382.21	ENST00000510281.1	861	3	-337	0	-337	0	multi-exon	FALSE	canonical	2	3	junction_2	5.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGCGCCCAGCAGGCGGCC	285	False	NA	NA	False	NA	NA	NA	14482079	14487789	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_14482774_14485068_14485247_14487463
H1_mix_00071809	chr5	+	374	1	FSM	ENSG00000240785.2	ENST00000490372.1	323	1	-16	-35	-16	35	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGTTGAAGCCATAGAAAA	81	False	NA	NA	False	NA	NA	NA	18049533	18049907	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_18049500_18049900
H1_mix_00071810	chr5	+	1662	1	FSM	ENSG00000241552.3	ENST00000473445.3	294	1	-1296	-72	-1296	72	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCCAGAAAAGTTTAGGA	NA	False	NA	NA	False	GGGGCT	-40	NA	18546015	18547677	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_18546000_18547700
H1_mix_00071811	chr5	+	1108	1	FSM	ENSG00000183666.18	ENST00000686303.1	1181	1	-4	77	-4	-52	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGAACTGAGAAGTGTG	NA	False	NA	NA	False	AAGAAA	-12	NA	21473278	21474386	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_21473300_21474400
H1_mix_00071812	chr5	+	437	1	FSM	ENSG00000226432.3	ENST00000514047.1	877	1	-2	442	-2	-442	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTCACCCGCTAGTTG	98	False	NA	NA	False	NA	NA	NA	24170367	24170804	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_24170400_24170800
H1_mix_00071813	chr5	+	341	1	FSM	ENSG00000251593.1	ENST00000511640.1	1732	1	-188	1579	-188	-1579	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAAGGTTTCTCCACCTG	NA	False	NA	NA	False	NA	NA	NA	25909314	25909655	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_25909300_25909700
H1_mix_00071814	chr5	+	4567	2	FSM	ENSG00000250337.8	ENST00000688783.1	2712	2	-21	-1834	0	1834	multi-exon	FALSE	canonical	3	49	junction_1	0	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATACACTGTTTTGTTC	-8	True	NA	NA	False	NA	NA	NA	27472279	27479861	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_27472520_27475534
H1_mix_00071820	chr5	+	1352	1	FSM	ENSG00000279923.1	ENST00000624768.1	1303	1	-77	28	-77	-28	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGAACTTTTGATCCCT	NA	False	NA	NA	False	NA	NA	NA	31558495	31559847	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_31558500_31559800
H1_mix_00071821	chr5	+	3592	18	FSM	ENSG00000133401.16	ENST00000502489.5	3787	18	19	176	19	-176	multi-exon	TRUE	canonical	2	5	junction_3	3.53920210740972	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCCCATCTCTACTAAAAA	5	True	NA	NA	False	NA	NA	NA	31854955	32077779	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_31855169_31983154_31983657_31995575_31995719_32000138_32000272_32010329_32010483_32037230_32037343_32048538_32048685_32052610_32052731_32053768_32053884_32057654_32057729_32057877_32058104_32059238_32059357_32061001_32061135_32069568_32069651_32071383_32071419_32072160_32072318_32073831_32074644_32077461
H1_mix_00071823	chr5	+	466	5	FSM	ENSG00000113407.14	ENST00000514259.5	466	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	679.639978223765	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCGCCCTCTGGAAGAAGA	NA	False	NA	NA	False	AGTAAA	-20	NA	33440738	33453346	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_33440777_33441045_33441144_33445323_33445405_33448540_33448732_33453288
H1_mix_00071825	chr5	+	2675	20	NNC	ENSG00000113407.14	novel	2672	19	NA	NA	0	17620	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	416.76852753077	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAACAACAACAAAACAGGAG	17	True	NA	NA	False	NA	NA	NA	33440992	33485711	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_33441144_33445323_33445405_33448540_33448732_33453288_33453413_33454944_33455067_33455586_33455705_33456001_33456067_33456148_33456228_33457256_33457404_33458565_33458665_33459694_33459862_33460901_33461065_33461157_33461296_33461666_33461745_33461905_33462007_33462098_33462204_33463752_33463826_33466870_33466986_33467559_33468084_33485677
H1_mix_00071826	chr5	+	1022	1	FSM	ENSG00000271771.1	ENST00000607051.1	647	1	35	-410	35	410	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAAAACTCTGTGTATT	NA	False	NA	NA	False	TTTAAA	-41	NA	34158155	34159177	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_34158200_34159200
H1_mix_00071828	chr5	+	557	7	FSM	ENSG00000039560.14	ENST00000510319.5	557	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	268.551671005786	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACACAAGAGCCCCATAAAC	19	True	NA	NA	False	NA	NA	NA	34656400	34808622	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_34656476_34686871_34686956_34757467_34757615_34795938_34796028_34803711_34803777_34807799_34807858_34808583
H1_mix_00071829	chr5	+	1038	6	FSM	ENSG00000113460.13	ENST00000510960.5	1161	6	0	123	0	-123	multi-exon	FALSE	canonical	3	1168	junction_2	61.7821980832667	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCTTTACTTGATTTTT	0	True	NA	NA	False	NA	NA	NA	34915676	34923234	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_34915898_34918363_34918476_34919839_34919884_34922216_34922288_34922538_34922589_34922694
H1_mix_00071831	chr5	+	2788	12	FSM	ENSG00000168724.17	ENST00000642851.1	2788	12	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_8	80.0783707036142	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGTGAAACCCCGTCTCTA	191	False	NA	NA	False	NA	NA	NA	34929819	34955867	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_34929917_34933814_34933909_34935709_34935834_34936143_34936267_34937325_34937631_34938857_34939010_34941095_34941184_34944866_34945026_34945721_34945804_34950169_34950343_34953925_34954002_34954552
H1_mix_00071832	chr5	+	5659	13	NIC	ENSG00000168724.17	novel	6208	13	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_11	100.101719099457	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTCCGATTTTAAAAATT	199	False	NA	-25	True	AAAAAG	-29	NA	34929827	34955168	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_34929917_34933814_34933909_34935709_34935834_34936143_34936267_34937325_34937631_34938857_34939010_34941095_34941184_34944866_34945026_34945760_34945804_34949542_34949678_34950169_34950343_34950443_34954002_34954552
H1_mix_00071834	chr5	+	520	3	FSM	ENSG00000152582.14	ENST00000505088.1	583	3	-9	72	3	-72	multi-exon	FALSE	canonical	3	7	junction_2	2	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAGGTACATAAAAAAGCAT	-2	True	NA	NA	False	AAAACA	-24	NA	35617891	35641683	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_35618056_35628459_35628563_35641430
H1_mix_00071837	chr5	+	3322	2	FSM	ENSG00000079215.15	ENST00000512374.1	1096	2	-26	-2200	-11	-1409	multi-exon	FALSE	canonical	3	89	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATAGAACCATTTGTAC	376	False	NA	NA	False	AATAAA	-45	NA	36606584	36611499	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_36606736_36608328
H1_mix_00071840	chr5	+	3798	9	FSM	ENSG00000079215.15	ENST00000680125.1	3918	9	120	0	-11	0	multi-exon	FALSE	canonical	1	1	junction_8	26.9950805703558	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTAACATCTTTGCACGT	376	False	NA	11	True	AATAAA	-16	NA	36606584	36688327	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_36606736_36608328_36608605_36629449_36629588_36671028_36671234_36674048_36674092_36676891_36677185_36679626_36679861_36680394_36680590_36686064
H1_mix_00071842	chr5	+	1123	5	NIC	ENSG00000079215.15	novel	3699	5	NA	NA	-2	366	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	34.5723878261251	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTCTTTAGCATTGTTT	15	False	NA	NA	False	AATAAA	-12	NA	36606627	36671779	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_36606736_36608328_36608605_36629449_36629588_36671028_36671234_36671383
H1_mix_00071848	chr5	+	642	4	FSM	ENSG00000151876.13	ENST00000513496.5	719	4	76	1	9	-1	multi-exon	FALSE	canonical	1	1	junction_1	2.94392028877595	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTACTCATATGTACAT	61	False	NA	NA	False	CATAAA	-2	NA	41925329	41934308	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_41925499_41929696_41929918_41933945_41934022_41934132
H1_mix_00071850	chr5	+	642	1	FSM	ENSG00000272382.1	ENST00000607830.1	920	1	192	86	192	-86	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCAAATGCGATGGAAGTT	54	False	NA	-78	True	NA	NA	NA	43033907	43034549	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_43033900_43034500
H1_mix_00071853	chr5	+	2761	6	NIC	ENSG00000172262.12	novel	2599	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	21	junction_3	68.9857956393923	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAATATGCTATTTTTTT	408	False	NA	16	True	AATAAA	-17	NA	43122038	43176247	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_43122178_43123208_43123311_43161248_43161614_43161708_43161932_43173317_43173449_43174446
H1_mix_00071854	chr5	+	5839	22	FSM	ENSG00000112992.18	ENST00000670904.1	4483	22	33	-1389	17	-556	multi-exon	FALSE	canonical	2	5	junction_1	21.6123337592575	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATCATTCTGAGCAAACT	223	False	NA	NA	False	GATAAA	-8	NA	43602915	43706840	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_43603005_43609142_43609347_43612907_43613138_43615847_43616066_43619031_43619120_43624031_43624121_43628199_43628388_43644191_43644326_43644610_43644803_43645356_43645511_43649146_43649309_43650476_43650588_43651738_43651885_43653017_43653214_43655839_43656074_43656652_43656814_43659170_43659351_43675510_43675671_43677724_43677807_43700118_43700238_43702620_43702737_43704254
H1_mix_00071855	chr5	+	14150	6	Fusion	ENSG00000112996.11_ENSG00000272335.1	novel	1648	5	NA	NA	0	-2	intron_retention	FALSE	non_canonical	0	0	junction_5	339.240917343412	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAAGCTGTGTGTGTGTA	-1	True	NA	20	True	AATAAA	-23	NA	44808946	44828590	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr5_+_44809564_44811008_44811155_44811914_44812021_44813105_44813283_44814912_44820427_44821000
H1_mix_00071857	chr5	+	1143	1	FSM	ENSG00000250422.1	ENST00000512159.1	2068	1	1032	-107	1032	107	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACACGTAACTTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	45558950	45560093	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_45559000_45560100
H1_mix_00071858	chr5	+	2886	25	NIC	ENSG00000151883.19	novel	7475	26	NA	NA	10	-2	intron_retention	FALSE	canonical	0	0	junction_1	21.8078731960119	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTTTTGTGCTGATATT	30	False	NA	16	True	AATAAA	-12	NA	50666990	50842339	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_50667187_50750150_50750189_50759642_50759733_50760291_50760363_50761820_50761899_50763147_50763243_50778068_50778130_50778559_50778651_50788522_50788590_50794206_50794333_50794852_50795418_50796981_50797033_50797137_50797234_50815431_50815525_50821212_50821339_50822334_50822401_50824907_50824976_50826754_50826804_50827943_50828057_50828311_50828385_50829891_50829962_50832780_50832855_50833978_50834049_50834930_50835016_50841965
H1_mix_00071859	chr5	+	2362	6	FSM	ENSG00000016082.15	ENST00000230658.12	2394	6	-17	49	-17	-49	multi-exon	FALSE	canonical	1	2	junction_1	9.70360757656656	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAGGACTATTTCACTAA	6	True	NA	NA	False	NA	NA	NA	51383430	51394681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_51383700_51384540_51384731_51387489_51387750_51389645_51389933_51391273_51391442_51393493
H1_mix_00071860	chr5	+	2993	6	NNC	ENSG00000134363.12	novel	2538	6	NA	NA	-416	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	121.864514933593	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAAAAATTTTAA	-25	True	NA	-15	True	AATAAA	-10	NA	53480209	53487106	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_53480877_53482879_53483072_53483503_53483723_53484068_53484333_53484996_53485228_53485686
H1_mix_00071863	chr5	+	3250	2	FSM	ENSG00000164294.14	ENST00000296734.6	3245	2	-5	0	-3	0	multi-exon	FALSE	canonical	3	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCAGGCATCACATGAAAG	-13	True	NA	NA	False	AAAAAG	-22	NA	55160163	55167071	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_55160397_55164054
H1_mix_00071864	chr5	+	695	6	FSM	ENSG00000039123.16	ENST00000505565.5	695	6	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_2	172.753465956547	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGAGTAATTGTCCTT	NA	False	NA	NA	False	NA	NA	NA	55322326	55344620	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_55322465_55324131_55324199_55340009_55340185_55341680_55341772_55343330_55343456_55344521
H1_mix_00071867	chr5	+	1708	6	NIC	ENSG00000155542.12	novel	786	5	NA	NA	-42	83	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	18.4434270134376	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAACATTTTCACACCAA	404	False	NA	NA	False	NA	NA	NA	56910017	56917431	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_56910395_56911168_56911537_56913010_56913135_56913873_56913990_56914860_56914967_56916814
H1_mix_00071879	chr5	+	5371	15	NNC	ENSG00000130449.6	novel	5518	14	NA	NA	18	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	5.44405686065464	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCTCCTTTATGGTAT	19	False	NA	17	True	ATTAAA	-21	NA	61332275	61546172	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_61332665_61332793_61332949_61472680_61473038_61490785_61490935_61494259_61494411_61521262_61521443_61525799_61525977_61526249_61526397_61530051_61530199_61531464_61531726_61535483_61535620_61538813_61538972_61539595_61539760_61541883_61541966_61543454
H1_mix_00071882	chr5	+	514	1	ISM	ENSG00000153015.17	ENST00000607786.2	4124	14	246220	439	49584	-439	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGTCTCTGTTGGTTATT	NA	False	NA	18	True	GATAAA	-25	NA	65020037	65020551	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_65020000_65020600
H1_mix_00071885	chr5	+	3270	13	FSM	ENSG00000113597.18	ENST00000438419.6	1437	13	-314	-1519	-284	50	multi-exon	FALSE	canonical	3	37	junction_7	47.1342644886805	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATATTTTTCATAGTTTT	NA	False	NA	NA	False	TATAAA	-11	NA	65624719	65666283	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_65625107_65635300_65635370_65635943_65636044_65637695_65637781_65647054_65647183_65650809_65650883_65652500_65652546_65655635_65655654_65658367_65658502_65660698_65660898_65662049_65662151_65664233_65664385_65664503
H1_mix_00071888	chr5	+	2002	1	FSM	ENSG00000251648.2	ENST00000511047.2	682	1	-1224	-96	-1224	96	mono-exon	FALSE	NA	NA	NA	NA	NA	941	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTCCCTCAGGCTGAA	9463	False	NA	NA	False	ACTAAA	-41	NA	65731748	65733750	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_65731700_65733800
H1_mix_00071889	chr5	+	7215	25	FSM	ENSG00000112851.15	ENST00000380943.6	6410	25	-805	0	-805	0	multi-exon	FALSE	canonical	3	73	junction_21	32.6955654485436	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCGGTGTTCCCTTTATT	-6	True	NA	18	True	AAAAAG	-27	NA	65925750	66080516	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_65926807_65988634_65988683_65992709_65992908_65994746_65994865_66012048_66012128_66013548_66013639_66014668_66014726_66021321_66021386_66023289_66023365_66024305_66024451_66025479_66025553_66025847_66025978_66026301_66026418_66028273_66028344_66038382_66038483_66043076_66043199_66044136_66044311_66046352_66046539_66048666_66048782_66050782_66050967_66053405_66054952_66075023_66075231_66076315_66076409_66076874_66076950_66078422
H1_mix_00071890	chr5	+	8562	26	FSM	ENSG00000112851.15	ENST00000284037.10	8544	26	-19	1	0	-1	multi-exon	FALSE	canonical	3	15	junction_22	39.9398347517863	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGCCTATAAATACTGAC	53	False	NA	NA	False	AATAAA	-18	NA	65926555	66082545	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_65926807_65988634_65988683_65992709_65992908_65994746_65994865_66012048_66012128_66013548_66013639_66014668_66014726_66021321_66021386_66023289_66023365_66024305_66024451_66025479_66025553_66025847_66025978_66026301_66026418_66028273_66028344_66038382_66038483_66043076_66043199_66044136_66044311_66046352_66046539_66048666_66048782_66050782_66050967_66053405_66054952_66072168_66072292_66075023_66075231_66076315_66076409_66076874_66076950_66078422
H1_mix_00071894	chr5	+	469	4	FSM	ENSG00000069020.19	ENST00000452953.5	507	4	0	38	0	-38	multi-exon	FALSE	canonical	1	2	junction_3	6.18241233033047	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTGCGTAGGGTAAATAA	NA	False	NA	-34	True	NA	NA	NA	66759727	66930923	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_66759863_66788669_66788795_66899950_66899983_66930746
H1_mix_00071895	chr5	+	247	5	FSM	ENSG00000069020.19	ENST00000434115.5	280	5	0	33	0	4	multi-exon	FALSE	canonical	1	1	junction_3	1.22474487139159	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCACCACATTAAATAAAACA	NA	False	NA	NA	False	NA	NA	NA	66788731	66986490	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_66788795_66899950_66899983_66916982_66917019_66963718_66963788_66986443
H1_mix_00071896	chr5	+	3892	16	FSM	ENSG00000145675.15	ENST00000521657.5	3891	16	-1	0	-1	0	multi-exon	TRUE	canonical	1	2	junction_1	12.4032253869709	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATATATGAATATGACAAAG	26	True	NA	1	True	AATAAA	-17	NA	68215774	68298753	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_68215954_68226289_68227010_68273389_68273483_68273938_68274014_68279601_68279734_68280527_68280730_68280926_68281007_68292258_68292362_68293100_68293200_68293302_68293484_68293708_68293835_68294535_68294679_68295147_68295325_68295419_68295489_68296170_68296342_68297411
H1_mix_00071899	chr5	+	591	5	FSM	ENSG00000134057.15	ENST00000503507.1	750	5	159	0	159	0	multi-exon	FALSE	canonical	3	20	junction_1	2199.78527361195	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGCAGTCAGACCAAAAT	202	False	NA	-14	True	NA	NA	NA	69167424	69174255	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_69167486_69167907_69168079_69168172_69168344_69171269_69171453_69174250
H1_mix_00071900	chr5	+	692	8	FSM	ENSG00000153044.10	ENST00000502689.1	692	8	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_3	286.972799678126	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTTAGTTATTTGTAGT	128	False	NA	26	True	NA	NA	NA	69189741	69209929	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_69189769_69191794_69191851_69194646_69194696_69197052_69197110_69202505_69202570_69202918_69202971_69208195_69208360_69209706
H1_mix_00071901	chr5	+	656	5	FSM	ENSG00000134058.12	ENST00000512687.5	905	5	-10	259	-10	-259	multi-exon	FALSE	canonical	3	510	junction_4	53.0707075513413	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCCATAGCTAGTTGACG	-6	True	NA	NA	False	NA	NA	NA	69234850	69255762	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_69235042_69235393_69235454_69252417_69252452_69254601_69254670_69255459
H1_mix_00071909	chr5	+	2340	17	FSM	ENSG00000152942.19	ENST00000521422.5	2323	17	-17	0	-3	0	multi-exon	FALSE	canonical	3	38	junction_2	55.1541872843758	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTAATATGCTTTTCTGA	-25	True	NA	NA	False	NA	NA	NA	69369802	69414360	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_69369934_69371034_69371172_69373829_69374088_69374627_69374712_69381900_69382058_69384796_69384934_69386042_69386096_69386179_69386306_69386395_69386466_69389033_69389146_69391830_69392014_69393154_69393241_69393353_69393501_69396396_69396547_69400048_69400170_69410492_69410551_69414030
H1_mix_00071911	chr5	+	6176	9	FSM	ENSG00000197822.12	ENST00000681041.1	3309	9	-38	-2829	-38	0	multi-exon	FALSE	canonical	1	7	junction_1	154.274916950229	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCAGTCTCCTCTCTTCGC	114	False	NA	9	True	NA	NA	NA	69492734	69558104	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_69492841_69504176_69504295_69509140_69509820_69513947_69514110_69534693_69534840_69544903_69545120_69547929_69548102_69551543_69551586_69553569
H1_mix_00071915	chr5	+	3133	17	NIC	ENSG00000183474.16	novel	4555	17	NA	NA	3	196	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	132.725515632828	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTAAATCAGGCTTTCAT	NA	False	NA	NA	False	AAGAAA	-23	NA	69560193	69593963	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_69560243_69562672_69562771_69565099_69565189_69566130_69566209_69566588_69566626_69566966_69567054_69567726_69567778_69568152_69568208_69572444_69572551_69578711_69578803_69579020_69579109_69579756_69579865_69582365_69582430_69585593_69585698_69586253_69586357_69590327_69590368_69592078
H1_mix_00071917	chr5	+	1564	16	NNC	ENSG00000183474.16	novel	2952	16	NA	NA	8	250	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	129.799058376999	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTTTTATAATTAAATATA	19	False	NA	NA	False	ATTAAA	-18	NA	69560232	69592496	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_69560278_69565099_69565189_69566130_69566209_69566588_69566626_69566966_69567054_69567726_69567778_69568152_69568208_69572444_69572551_69578711_69578803_69579020_69579109_69579756_69579865_69582365_69582430_69585593_69585698_69586253_69586357_69590327_69590368_69592078
H1_mix_00071921	chr5	+	884	7	FSM	ENSG00000205571.14	ENST00000511812.5	867	7	-17	0	-17	0	multi-exon	FALSE	canonical	3	24	junction_3	623.670764283706	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGAATTTTGATGCCAA	NA	False	NA	NA	False	AAAAAG	-45	NA	70049620	70076706	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_70049767_70063414_70063487_70065964_70066085_70067293_70067447_70069234_70069331_70070640_70070752_70076520
H1_mix_00071922	chr5	+	1431	8	FSM	ENSG00000205571.14	ENST00000380742.8	1388	8	-43	0	-17	0	multi-exon	FALSE	canonical	3	48	junction_5	613.854898762479	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTATCTGTGATTGT	NA	False	NA	NA	False	AATAAA	-22	NA	70049620	70077592	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_70049767_70063414_70063487_70065964_70066085_70066933_70067135_70067293_70067447_70070640_70070752_70076520_70076575_70077018
H1_mix_00071928	chr5	+	1040	9	NIC	ENSG00000226259.10	novel	1055	9	NA	NA	3	6158	combination_of_known_junctions	FALSE	canonical	3	20	junction_4	111.457320867676	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATCTATCTACTTGGAT	-6	True	NA	NA	False	ATTAAA	-27	NA	70415354	70434149	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_70415551_70417821_70417920_70420248_70420338_70421279_70421358_70422112_70422200_70422872_70422924_70423298_70423354_70427584_70427691_70433869
H1_mix_00071931	chr5	+	4091	9	NNC	ENSG00000253366.3	novel	640	5	NA	NA	-31374	60599	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_7	31.0963723768545	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGGTTATTAAGTTTTCAC	334	False	NA	NA	False	NA	NA	NA	70719809	70856513	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_70720034_70749576_70749611_70751076_70751233_70785437_70785626_70789207_70789293_70791131_70791307_70795780_70795917_70850809_70850925_70853535
H1_mix_00071932	chr5	+	1942	3	FSM	ENSG00000172058.16	ENST00000354833.7	1889	3	-53	0	-35	0	multi-exon	FALSE	canonical	3	51	junction_2	925	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTTGTCAGTCATTTCT	NA	False	NA	NA	False	NA	NA	NA	70900633	70918530	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_70900877_70901824_70901934_70916940
H1_mix_00071935	chr5	+	1430	8	FSM	ENSG00000172062.17	ENST00000506163.5	1445	8	-8	23	0	1	multi-exon	FALSE	canonical	3	381	junction_7	400.82608575342	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATCTGTGATTGTATTTC	-1	True	NA	NA	False	AATAAA	-27	NA	70925086	70953017	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_70925185_70938838_70938911_70941388_70941509_70942357_70942559_70942717_70942871_70944657_70944754_70946065_70946177_70952438
H1_mix_00071938	chr5	+	1865	1	FSM	ENSG00000253900.1	ENST00000517835.1	295	1	-147	-1423	-147	1423	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATGTGTTAACATGAATT	NA	False	NA	NA	False	NA	NA	NA	71132845	71134710	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_71132800_71134700
H1_mix_00071940	chr5	+	3484	17	FSM	ENSG00000131844.17	ENST00000682045.1	3473	17	-14	3	-14	0	multi-exon	FALSE	canonical	1	8	junction_1	96.919243928902	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTGTGTGTGATATTTA	NA	False	NA	25	True	AATAAA	-14	NA	71586772	71658703	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_71586851_71592925_71592993_71596279_71596365_71599658_71599761_71602505_71602634_71604355_71604469_71626639_71626754_71632120_71632186_71634942_71635043_71635150_71635247_71641002_71641076_71643818_71643896_71646210_71646278_71649096_71649254_71650068_71650184_71652668_71652755_71656742
H1_mix_00071942	chr5	+	3708	17	FSM	ENSG00000131844.17	ENST00000683882.1	3685	17	-23	0	1	0	multi-exon	FALSE	canonical	1	4	junction_11	97.8927985093898	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAAAGTCAATATTTCAA	1	True	NA	5	True	AATAGA	-18	NA	71587280	71658683	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_71587555_71592925_71592993_71596279_71596365_71599658_71599761_71602505_71602634_71604355_71604469_71626639_71626754_71632120_71632186_71634942_71635043_71635150_71635247_71641002_71641076_71643770_71643896_71646210_71646278_71649096_71649254_71650068_71650184_71652668_71652755_71656742
H1_mix_00071943	chr5	+	1381	10	FSM	ENSG00000131844.17	ENST00000629193.3	1360	10	-21	0	0	0	multi-exon	FALSE	canonical	3	115	junction_6	68.9703819059088	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTAGTTCTTTTTGTTTT	-8	True	NA	18	True	AGTAAA	-15	NA	71587295	71641368	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_71587555_71592925_71592993_71596279_71596365_71599658_71599761_71602505_71602634_71604355_71604469_71632120_71632186_71634942_71635043_71635150_71635247_71641002
H1_mix_00071945	chr5	+	6929	5	ISM	ENSG00000131711.15	ENST00000296755.12	11790	7	-268	9606	-27	4519	5prime_fragment	FALSE	canonical	3	181	junction_2	8.1967981553775	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTCCCGTGCAAGACCGC	NA	False	NA	NA	False	NA	NA	NA	72107206	72199959	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_72107716_72115697_72115800_72183742_72183826_72186613_72186755_72193865
H1_mix_00071947	chr5	+	1702	2	NNC	ENSG00000131711.15	novel	11790	7	NA	NA	28362	395	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCACTGCACTCCAACC	6	True	NA	NA	False	NA	NA	NA	72207989	72209960	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_72209569_72209837
H1_mix_00071948	chr5	+	1596	2	NNC	ENSG00000131711.15	novel	11790	7	NA	NA	28362	3324	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGGAACTAATGAGCCAG	6	True	NA	NA	False	NA	NA	NA	72207989	72212889	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_72209560_72212863
H1_mix_00071952	chr5	+	2197	11	FSM	ENSG00000049883.15	ENST00000308077.9	2195	11	-2	0	-2	0	multi-exon	FALSE	canonical	2	5	junction_10	26.4794259756514	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTGGATTTCTCCACTT	-12	True	NA	NA	False	NA	NA	NA	72320370	72360225	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_72320510_72322171_72322265_72326611_72326742_72331257_72331376_72335017_72335097_72335793_72335886_72338621_72338736_72342961_72343037_72352640_72352755_72358202_72358824_72359603
H1_mix_00071955	chr5	+	3420	25	NNC	ENSG00000083312.19	novel	3028	25	NA	NA	5	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	54.1256094397303	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCGCAATGCTTAAATGTT	-7	True	NA	NA	False	AATAAA	-12	NA	72848125	72916725	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_72848252_72848384_72848499_72851237_72851320_72855773_72855924_72861807_72861915_72865595_72865730_72872638_72872721_72875614_72875738_72877227_72877347_72882466_72882528_72883063_72883233_72887069_72887223_72888077_72888304_72889785_72889958_72891809_72891897_72893138_72893247_72893376_72893536_72893615_72893704_72896457_72896557_72897055_72897152_72900005_72900082_72900973_72901074_72903708_72903784_72905302_72905446_72916154
H1_mix_00071960	chr5	+	6645	21	FSM	ENSG00000113161.17	ENST00000680940.1	6621	21	-24	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	203.604242342835	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTGTGTGTGTGTGTG	10	True	NA	NA	False	NA	NA	NA	75337245	75364001	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_75337301_75340447_75340689_75342582_75342771_75343852_75343965_75344244_75344333_75345573_75345659_75347203_75347310_75350041_75350149_75350257_75350375_75350788_75350950_75351067_75351316_75351423_75351603_75354502_75354698_75355055_75355215_75355364_75355523_75356342_75356449_75358656_75358828_75359169_75359311_75359397_75359557_75359984_75360140_75360287
H1_mix_00071963	chr5	+	1393	6	FSM	ENSG00000122008.15	ENST00000508867.5	2464	6	0	1071	0	-1071	multi-exon	FALSE	canonical	3	28	junction_5	4.83321838943783	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTCCATATCCTGACCTC	12	False	NA	NA	False	NA	NA	NA	75547009	75581894	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_75547158_75552471_75552592_75569339_75569493_75573737_75573870_75576779_75576934_75581208
H1_mix_00071965	chr5	+	931	1	FSM	ENSG00000272040.1	ENST00000606908.1	1167	1	227	9	227	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTGATTACCTTTCTT	NA	False	NA	NA	False	AATAAA	-7	NA	75609043	75609974	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_75609000_75610000
H1_mix_00071966	chr5	+	1209	6	FSM	ENSG00000189045.15	ENST00000673223.1	1209	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5.67802782663136	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTAAATCACACATTTTG	330	False	NA	NA	False	NA	NA	NA	75611805	75671636	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_75611828_75659282_75659382_75663393_75663490_75666791_75666994_75669251_75669384_75670978
H1_mix_00071967	chr5	+	371	2	FSM	ENSG00000145703.17	ENST00000504815.1	596	2	225	0	225	0	multi-exon	FALSE	canonical	3	241	junction_1	0	1570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCCTTGGAAAGCAACGAT	NA	False	NA	NA	False	ACTAAA	-3	NA	76597298	76600878	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_76597603_76600811
H1_mix_00071968	chr5	+	583	5	FSM	ENSG00000145703.17	ENST00000512256.1	583	5	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_2	27.6315037592962	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCAGAAGAAATGAAGCATA	2551	False	NA	NA	False	NA	NA	NA	76677153	76695506	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_76677351_76683114_76683218_76683775_76683918_76693354_76693443_76695453
H1_mix_00071970	chr5	+	751	4	FSM	ENSG00000145708.11	ENST00000512446.1	751	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	5.73488351136175	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCTGATCTTACCCTGGG	358	False	NA	NA	False	NA	NA	NA	76953416	76958844	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_76953695_76954028_76954187_76955652_76955864_76958740
H1_mix_00071971	chr5	+	1692	3	FSM	ENSG00000250802.7	ENST00000512001.6	1691	3	-1	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	2	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGGTATTGTCTCTCTT	246	False	NA	NA	False	AATATA	-33	NA	77087012	77148534	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_77087620_77118319_77118522_77147651
H1_mix_00071973	chr5	+	547	1	FSM	ENSG00000251400.1	ENST00000510973.1	1533	1	139	847	139	-847	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGCACAGCAATGGCCAAAG	NA	False	NA	NA	False	NA	NA	NA	77290406	77290953	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_77290400_77291000
H1_mix_00071974	chr5	+	225	1	FSM	ENSG00000213763.4	ENST00000515712.1	1123	1	79	819	79	-819	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAACCCATGCTGCTGTTT	157	False	NA	NA	False	NA	NA	NA	77784959	77785184	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_77785000_77785200
H1_mix_00071975	chr5	+	3766	5	FSM	ENSG00000085365.18	ENST00000320280.8	3766	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	147.67024073929	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGGAACAGTATTCTT	NA	False	NA	15	True	AATACA	-5	NA	78416602	78478815	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_78416650_78418774_78418904_78421800_78421961_78459244_78459363_78475503
H1_mix_00071976	chr5	+	2728	16	NIC	ENSG00000164329.14	novel	2204	17	NA	NA	2	19	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	46.9393935481347	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTTTTAGTATTTCTT	2	True	NA	NA	False	AATAAA	-36	NA	79612576	79686285	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_79612736_79613010_79613076_79619611_79619786_79619993_79620084_79623251_79623490_79640850_79640966_79641104_79641197_79642831_79642911_79645122_79645193_79648616_79648694_79649061_79649191_79656957_79657002_79668891_79669029_79679578_79679671_79681981_79682062_79685198
H1_mix_00071978	chr5	+	3736	3	ISM	ENSG00000164329.14	ENST00000515807.5	576	5	3695	0	3580	0	3prime_fragment	FALSE	canonical	3	190	junction_1	4	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCACCAAGAGCCAACTGT	2079	False	NA	NA	False	NA	NA	NA	79616197	79623309	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_79619786_79619993_79620084_79623251
H1_mix_00071979	chr5	+	3367	21	NIC	ENSG00000113296.14	novel	3222	22	NA	NA	-283	0	combination_of_known_splicesites	FALSE	canonical	3	39	junction_7	33.0170789137985	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGTTGCTCAGACATTGC	NA	False	NA	22	True	AATAAA	-24	NA	80035064	80083287	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_80035626_80040076_80040281_80055784_80056033_80058205_80058315_80058707_80058791_80059439_80059492_80059702_80059906_80065408_80065478_80067972_80068126_80070305_80070411_80070642_80070751_80071020_80071181_80072277_80072397_80073274_80073328_80076854_80077049_80078048_80078228_80078920_80078970_80079061_80079259_80079904_80080078_80082405_80082546_80083079
H1_mix_00071980	chr5	+	6685	19	FSM	ENSG00000039319.17	ENST00000510158.5	6680	19	-5	0	-5	0	multi-exon	FALSE	canonical	3	4	junction_1	25.399037602065	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTTTGTAGACATATAGT	5	True	NA	42	True	AATAAA	-44	NA	80408018	80479140	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_80408154_80411645_80411774_80434108_80434218_80436755_80439008_80439935_80440033_80443122_80443285_80445262_80445406_80448025_80448405_80449590_80449714_80450430_80450587_80451484_80451710_80455691_80455775_80456460_80456566_80456944_80457093_80459413_80459495_80472760_80472924_80473753_80473860_80474662_80474831_80477218
H1_mix_00071982	chr5	+	675	4	FSM	ENSG00000152380.10	ENST00000509292.1	1019	4	0	344	0	-344	multi-exon	FALSE	canonical	2	4	junction_2	3.85861230093008	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACAGAGATAGAAAGGGCA	1495	False	NA	NA	False	NA	NA	NA	80501804	80522180	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_80501918_80513603_80513770_80519692_80519911_80522002
H1_mix_00071983	chr5	+	2343	7	FSM	ENSG00000113319.13	ENST00000502677.1	2752	7	409	0	409	0	multi-exon	FALSE	canonical	3	24	junction_6	9.38823140367177	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATGACTGTAAAGTGTT	NA	False	NA	26	True	ATTAAA	-17	NA	81070432	81088564	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_81070582_81073198_81073453_81080120_81080201_81080595_81080790_81085801_81085912_81086834_81086954_81087127
H1_mix_00071984	chr5	+	1649	6	NNC	ENSG00000131732.12	novel	1580	6	NA	NA	-4	-7	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	79.9814978604427	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTGTGTATAATTTTT	-9	True	NA	24	True	AATAAA	-28	NA	81301636	81313147	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_81301968_81304740_81305142_81308560_81308712_81308945_81309039_81311210_81311280_81312543
H1_mix_00071987	chr5	+	1839	6	FSM	ENSG00000038427.16	ENST00000513984.5	1825	6	-14	0	0	0	multi-exon	FALSE	canonical	3	354	junction_5	15.9499216299015	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGCCTTCTAATCATTA	-1	True	NA	NA	False	AATAAA	-29	NA	83471776	83512940	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_83472024_83483512_83483589_83490097_83490473_83493545_83493721_83493803_83493932_83512102
H1_mix_00071989	chr5	+	475	3	FSM	ENSG00000250320.7	ENST00000661965.1	570	3	81	14	18	-14	multi-exon	FALSE	canonical	1	1	junction_1	4.5	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGTGAGGTTACACCTTC	82	False	NA	NA	False	NA	NA	NA	84382504	84399910	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_84382539_84387821_84387937_84399584
H1_mix_00071992	chr5	+	3776	25	FSM	ENSG00000145715.15	ENST00000456692.6	3776	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	40.2988833592198	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTAAAAGAGCTAAGCATT	-16	True	NA	33	True	AATAAA	-34	NA	87268932	87391931	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_87269056_87331347_87331501_87332506_87332643_87333266_87333338_87337973_87338092_87341289_87341322_87346671_87346725_87349213_87349365_87353156_87353236_87362550_87362672_87363347_87363505_87369812_87369901_87372117_87372196_87374162_87374321_87374839_87374917_87376392_87376566_87376880_87377041_87378395_87378539_87379734_87379851_87380508_87380596_87383712_87383781_87385300_87385390_87386825_87386904_87389392_87389528_87390799
H1_mix_00071993	chr5	+	2031	4	FSM	ENSG00000247828.9	ENST00000654762.1	2019	4	-12	0	-4	0	multi-exon	FALSE	canonical	1	1	junction_1	13.490737563232	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTAATTCTGTTTTTAAT	-30	True	NA	NA	False	TATAAA	-9	NA	88268886	88436922	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_88269028_88269467_88270586_88410072_88410195_88436272
H1_mix_00071994	chr5	+	2212	4	FSM	ENSG00000247828.9	ENST00000658478.1	3379	4	-4	1171	-4	-1139	multi-exon	FALSE	canonical	3	28	junction_3	28.5462587546755	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTCAGCCCCAAACTC	-30	True	NA	NA	False	NA	NA	NA	88268886	88438161	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_88269028_88270525_88270586_88410072_88410195_88436272
H1_mix_00071995	chr5	+	5262	4	FSM	ENSG00000247828.9	ENST00000669353.1	5261	4	-1	0	1	0	multi-exon	FALSE	canonical	3	13	junction_3	44.7288124888943	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATAAATTTCTATTGTTT	-1	True	NA	-19	True	NA	NA	NA	88268915	88287627	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_88269028_88270525_88270586_88282041_88282107_88282602
H1_mix_00071996	chr5	+	1700	6	FSM	ENSG00000247828.9	ENST00000504636.2	1700	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	41.8349136487695	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGGTAGTTTGTTACA	0	True	NA	11	True	AATAAA	-23	NA	88268995	88287657	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_88269028_88269467_88270586_88282041_88282107_88282714_88282867_88285740_88285852_88287435
H1_mix_00071998	chr5	+	553	5	FSM	ENSG00000247828.9	ENST00000668037.1	553	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	40.2018345352547	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTGTGGTAGTTTGTTA	28	False	NA	9	True	AATAAA	-21	NA	88269063	88287655	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_88269120_88270525_88270586_88282041_88282107_88282714_88282867_88287435
H1_mix_00071999	chr5	+	590	4	FSM	ENSG00000248309.8	ENST00000514571.1	594	4	0	4	0	-4	multi-exon	FALSE	canonical	0	0	junction_1	1.88561808316413	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAGTAATAAAAATAATGAA	NA	False	NA	NA	False	AATAAA	-9	NA	88965874	89168664	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_88965916_89094958_89095030_89150532_89150596_89168249
H1_mix_00072009	chr5	+	3094	31	NIC	ENSG00000153113.24	novel	4330	31	NA	NA	0	-16	combination_of_known_junctions	FALSE	canonical	3	62	junction_24	42.1379876121297	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACCAGGAAGCACCAAAC	-22	True	NA	2	True	AATAAA	-21	NA	96662236	96773217	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_96662498_96675538_96675602_96695835_96695908_96722638_96722699_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765223_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
H1_mix_00072012	chr5	+	4350	31	FSM	ENSG00000153113.24	ENST00000674984.1	4330	31	-20	0	0	0	multi-exon	FALSE	canonical	3	124	junction_2	32.8939204109209	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATCAAGGCATAAAATACA	22	False	NA	NA	False	NA	NA	NA	96662402	96774636	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_96662498_96675538_96675602_96695835_96695908_96722638_96722699_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765220_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
H1_mix_00072015	chr5	+	4358	30	FSM	ENSG00000153113.24	ENST00000395813.5	4356	30	-2	0	-2	0	multi-exon	FALSE	canonical	3	39	junction_3	52.1305185389434	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCTTGGTTGTGTATTT	-6	True	NA	NA	False	ATTAAA	-18	NA	96702786	96774679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_96702916_96722638_96722699_96726793_96726860_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765220_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
H1_mix_00072016	chr5	+	2562	28	NIC	ENSG00000153113.24	novel	4282	29	NA	NA	6	-3	combination_of_known_junctions	FALSE	canonical	3	35	junction_3	47.0288706821736	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTCAGTGTTCTGATTT	-1	True	NA	1	True	TTTAAA	-2	NA	96702831	96773051	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_96702916_96722638_96722699_96727488_96727531_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765220_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
H1_mix_00072017	chr5	+	238	1	FSM	ENSG00000251553.1	ENST00000511690.1	1966	1	1486	242	1486	-242	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAACCTATGATTCCCATT	NA	False	NA	NA	False	NA	NA	NA	98680887	98681125	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_98680900_98681100
H1_mix_00072020	chr5	+	3978	24	FSM	ENSG00000145730.21	ENST00000510208.2	3978	24	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_22	44.6712418539183	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCATTAGCTGTCAGTGT	131	False	NA	9	True	AATAAA	-9	NA	102754782	103029707	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_102755349_102865822_102866285_102867272_102867394_102901355_102901414_102913933_102914022_102924956_102925043_102926584_102926669_102946836_102946886_102948377_102948446_102949536_102949618_102949901_102949979_102950716_102950821_102959874_102960060_102961157_102961230_102990271_102990402_103003032_103003150_103005153_103005227_103006800_103007012_103007456_103007658_103009750_103009867_103017333_103017434_103019789_103019844_103028184_103028239_103028886
H1_mix_00072021	chr5	+	3941	25	NIC	ENSG00000145730.21	novel	3993	26	NA	NA	-148	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_23	53.1995065766591	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTCAGTGTATTTTC	-5	True	NA	15	True	AATAAA	-15	NA	102755149	103029713	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_102755349_102865822_102866285_102867272_102867394_102901355_102901414_102913933_102914022_102924956_102925043_102926584_102926669_102946836_102946886_102948377_102948446_102949536_102949618_102949901_102949979_102950716_102950821_102959874_102960060_102961157_102961230_102974115_102974437_102990271_102990402_103003032_103003150_103005153_103005227_103006800_103007012_103007456_103007658_103009750_103009867_103017333_103017434_103019789_103019844_103028181_103028239_103028886
H1_mix_00072022	chr5	+	3832	26	FSM	ENSG00000145730.21	ENST00000304400.12	3832	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_24	67.9169610627566	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATTGCAATGAAGGAAAT	-5	True	NA	-35	True	TTTAAA	-12	NA	102755297	103029551	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_102755349_102865822_102866285_102867272_102867394_102901355_102901414_102913933_102914022_102924956_102925043_102926584_102926669_102946836_102946886_102948377_102948446_102949536_102949618_102949901_102949979_102950716_102950821_102959874_102960060_102961157_102961230_102974115_102974437_102990271_102990402_103003032_103003150_103005153_103005227_103006800_103007012_103007456_103007658_103009750_103009867_103017333_103017434_103019789_103019844_103025133_103025335_103028181_103028239_103028886
H1_mix_00072025	chr5	+	3665	25	FSM	ENSG00000145730.21	ENST00000682972.1	3649	25	-16	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	55.622222152861	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGAGCATTAGCTGTC	-5	True	NA	4	True	AATAAA	-4	NA	102755297	103029702	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_102755349_102865822_102866285_102867272_102867394_102901355_102901414_102913933_102914022_102924956_102925043_102926584_102926669_102946836_102946886_102948377_102948446_102949536_102949618_102949901_102949979_102950716_102950821_102959874_102960060_102961157_102961230_102990271_102990402_103003032_103003150_103005153_103005227_103006800_103007012_103007456_103007658_103009750_103009867_103017333_103017434_103019789_103019844_103025130_103025335_103028181_103028239_103028886
H1_mix_00072032	chr5	+	5834	31	NNC	ENSG00000145725.20	novel	15369	31	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	47.0203383890654	121	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTATCTCTTACTTTTT	-17	True	NA	44	True	ATTAAA	-45	NA	103120269	103203236	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_103120489_103129305_103129704_103133452_103133649_103136731_103136823_103138383_103138470_103146526_103146682_103147930_103148033_103149151_103149314_103151252_103151375_103152647_103152750_103153847_103153935_103154669_103154746_103154833_103154944_103155908_103155995_103158187_103158314_103158454_103158574_103159145_103159329_103167178_103167321_103168071_103168296_103173154_103173283_103173857_103173973_103177666_103177775_103177863_103177981_103180020_103180189_103183233_103183408_103184671_103184745_103186319_103186440_103187313_103187377_103190841_103190983_103194899_103195026_103201521
H1_mix_00072034	chr5	+	2940	12	NIC	ENSG00000145725.20	novel	15369	31	NA	NA	18	-24	combination_of_known_junctions	FALSE	canonical	3	28	junction_8	52.7230405825049	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTAAATGGTAAATTTTTA	127	False	NA	20	True	ATTAAA	-21	NA	103168205	103203212	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_103168296_103173154_103173283_103173857_103173973_103177666_103177775_103177863_103177981_103180020_103180189_103184671_103184745_103186319_103186440_103187313_103187377_103190841_103190983_103194899_103195026_103201521
H1_mix_00072037	chr5	+	425	1	Intergenic	novelGene_1179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGGTGGTATGTATGGAG	NA	False	NA	NA	False	AATAAA	-40	NA	104063731	104064156	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_104063700_104064200
H1_mix_00072038	chr5	+	4118	3	Antisense	novelGene_ENSG00000251027.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	4.5	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	16	True	AATAAA	-22	NA	106978056	106984050	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr5_+_106978194_106978544_106979187_106980711
H1_mix_00072039	chr5	+	311	1	FSM	ENSG00000250273.1	ENST00000512850.1	177	1	-308	174	-308	-174	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCGCATCTTTCAGATTCA	NA	False	NA	NA	False	TATAAA	-27	NA	107194847	107195158	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_107194800_107195200
H1_mix_00072041	chr5	+	2193	3	FSM	ENSG00000112893.10	ENST00000513921.1	2193	3	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_2	5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCCATGCTATCAATC	3861	False	NA	61	True	AAGAAA	-14	NA	109853580	109867173	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_109855335_109865035_109865147_109866845
H1_mix_00072044	chr5	+	3301	3	FSM	ENSG00000224032.8	ENST00000508590.2	366	3	-376	-2559	-38	56	multi-exon	FALSE	canonical	2	33	junction_1	215.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTGAAGAAATACTTGCAG	NA	False	NA	NA	False	AAAAAG	-26	NA	112160487	112164874	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_112160992_112161702_112161776_112162150
H1_mix_00072045	chr5	+	596	3	FSM	ENSG00000134982.17	ENST00000505350.1	573	3	-23	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	16	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTGATTTATTAGAGCGT	-11	True	NA	NA	False	NA	NA	NA	112707497	112766383	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_112707883_112754872_112755026_112766325
H1_mix_00072051	chr5	+	2632	17	FSM	ENSG00000047188.16	ENST00000515883.5	2629	17	-15	12	0	-12	multi-exon	FALSE	canonical	3	87	junction_13	16.8318893770129	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTCAGATGTAAGAAGCT	-4	True	NA	NA	False	ATTAAA	-22	NA	113513693	113556348	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_113514083_113515271_113515363_113524980_113525178_113526585_113526786_113532878_113533046_113534304_113534408_113535641_113535799_113539073_113539182_113540967_113541117_113542367_113542504_113548540_113548668_113548954_113549021_113553180_113553360_113553589_113553687_113553766_113553855_113553941_113554023_113556051
H1_mix_00072052	chr5	+	2127	16	FSM	ENSG00000047188.16	ENST00000503857.5	2138	16	0	11	0	-11	multi-exon	FALSE	canonical	3	9	junction_2	29.8120035481609	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAAATTTATTTAAATAT	-4	True	NA	NA	False	NA	NA	NA	113513693	113561185	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_113514083_113515271_113515363_113532878_113533046_113534304_113534408_113535641_113535799_113539073_113539182_113540967_113541117_113542367_113542504_113548540_113548668_113548954_113549021_113553180_113553360_113553589_113553687_113553766_113553855_113553941_113554023_113556051_113556135_113561079
H1_mix_00072058	chr5	+	408	1	FSM	ENSG00000197575.6	ENST00000461663.1	408	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTCTGCAATGCTGTA	23	False	NA	NA	False	TATAAA	-22	NA	116716242	116716650	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_116716200_116716600
H1_mix_00072059	chr5	+	1835	13	FSM	ENSG00000172869.15	ENST00000503802.5	1835	13	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	21.8263347561813	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTATTTTTACGCCTAA	49	True	NA	10	True	AATAAA	-19	NA	119071204	119133691	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_119071258_119071554_119071657_119097978_119098105_119101934_119102007_119105179_119105259_119110150_119110284_119114474_119114542_119116157_119116337_119118814_119119005_119120970_119121140_119129210_119129424_119133131_119133386_119133493
H1_mix_00072064	chr5	+	2905	25	FSM	ENSG00000133835.18	ENST00000414835.7	2881	25	-24	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	402.719470875475	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTGTGATTTTCTGT	0	True	NA	23	True	AATAAA	-17	NA	119452472	119542332	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_119452822_119456314_119456369_119471635_119471701_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
H1_mix_00072066	chr5	+	11890	21	FSM	ENSG00000133835.18	ENST00000683390.1	11908	21	0	18	0	-18	multi-exon	FALSE	canonical	3	1169	junction_8	91.088679318563	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGAAAGTGTTGATTATA	4	True	NA	NA	False	AATAAA	-14	NA	119452527	119544965	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_119452634_119456314_119456369_119473907_119474016_119474400_119474461_119475705_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119536551_119541904
H1_mix_00072067	chr5	+	2568	24	FSM	ENSG00000133835.18	ENST00000643250.1	2551	24	-17	0	0	0	multi-exon	FALSE	canonical	3	31	junction_7	338.115443199592	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTGTGATTTTCTGT	26	True	NA	23	True	AATAAA	-17	NA	119452735	119542332	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_119452822_119456314_119456369_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477493_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
H1_mix_00072069	chr5	+	1306	2	NNC	ENSG00000248927.1	novel	1114	2	NA	NA	6451	386	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGTAGTTGCTTATTT	NA	False	NA	NA	False	AATAAA	-14	NA	120787668	120791164	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_120787764_120789953
H1_mix_00072071	chr5	+	1821	7	FSM	ENSG00000064692.20	ENST00000510003.5	2039	7	0	218	0	-218	multi-exon	FALSE	canonical	3	27	junction_1	12.2122434011482	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACCAGAGAAACCACTACC	-1	True	NA	NA	False	ATTAAA	-19	NA	122312236	122441059	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_122312285_122391088_122391192_122403792_122403866_122422867_122423740_122425351_122425532_122431968_122432083_122440628
H1_mix_00072072	chr5	+	2303	4	FSM	ENSG00000064692.20	ENST00000513719.1	2303	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	9.03081145609604	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTATAAGCTTGGGGCACC	NA	False	NA	15	True	AATAAA	-16	NA	122444155	122464054	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_122444733_122449844_122449938_122450532_122451602_122463490
H1_mix_00072076	chr5	+	1356	10	FSM	ENSG00000151292.17	ENST00000511130.6	1356	10	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	92.7146158919941	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCATCTCTGTAGTGAC	13	True	NA	-71	True	NA	NA	NA	123512259	123614455	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_123512571_123573392_123573542_123575728_123575964_123588067_123588154_123588426_123588512_123590409_123590559_123591318_123591415_123604723_123604831_123605338_123605363_123614341
H1_mix_00072077	chr5	+	2424	12	FSM	ENSG00000151292.17	ENST00000361991.6	2424	12	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_9	71.6977125400181	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGCACATTAGTCTCT	204	False	NA	23	True	AATAAA	-20	NA	123545633	123615446	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_123545842_123553106_123553148_123557494_123557565_123573392_123573542_123575728_123575964_123588067_123588154_123588426_123588512_123590412_123590559_123591318_123591415_123595038_123595135_123604723_123604831_123614341
H1_mix_00072079	chr5	+	3401	6	NNC	ENSG00000164902.14	novel	3609	5	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_5	210.526387894725	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCTTCAAGTGATTATAT	7	True	NA	50	True	AATAAA	-24	NA	126600950	126627252	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_126601059_126603569_126604184_126608363_126608485_126617249_126617334_126624574_126625543_126625746
H1_mix_00072080	chr5	+	2334	11	FSM	ENSG00000113368.12	ENST00000504788.5	1801	11	-533	0	-3	0	multi-exon	TRUE	canonical	3	6	junction_1	80.9972839050792	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAGGGGAGGGTAAATAA	NA	False	NA	NA	False	NA	NA	NA	126776619	126836571	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_126777245_126804775_126804933_126805570_126805697_126810179_126810351_126811772_126811899_126818921_126819143_126820909_126821136_126822780_126822886_126825987_126826108_126832693_126832802_126836222
H1_mix_00072081	chr5	+	1561	6	FSM	ENSG00000113368.12	ENST00000395354.1	1572	6	0	11	0	-11	multi-exon	FALSE	canonical	3	247	junction_3	15.8996855314814	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAGAACTTTATTTT	19	True	NA	NA	False	AATAAA	-13	NA	126777188	126819223	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_126777868_126804775_126804933_126805570_126805697_126810179_126810351_126811772_126811899_126818921
H1_mix_00072082	chr5	+	5930	2	Intergenic	novelGene_1198	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTCAGTTAGTTAAGGC	NA	False	NA	NA	False	NA	NA	NA	126839348	126845619	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_126844240_126844580
H1_mix_00072083	chr5	+	4330	14	FSM	ENSG00000145794.17	ENST00000508365.5	2365	14	0	-1965	0	1965	multi-exon	TRUE	canonical	2	7	junction_13	32.9548732153388	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACAGGCTGAAGTTTATG	17	True	NA	NA	False	TATAAA	-21	NA	127290845	127426746	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_127291057_127331290_127331425_127339119_127339222_127340529_127340631_127369909_127370003_127396531_127396779_127398675_127398797_127402545_127402683_127410388_127410602_127417637_127417813_127419119_127419241_127420043_127420208_127422669_127422773_127424338
H1_mix_00072085	chr5	+	4372	22	NIC	ENSG00000145808.10	novel	5201	23	NA	NA	160	-13	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	20.0947867247886	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTCTAATGCAGGAGT	123	False	NA	4	True	AATAAA	-5	NA	129460457	129738670	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_129460483_129509076_129509243_129526283_129526457_129527747_129527832_129528519_129528678_129551863_129551908_129596558_129596665_129620617_129620759_129622197_129622349_129641858_129641961_129647764_129647896_129648797_129648971_129654305_129654434_129658616_129658738_129665498_129665580_129679763_129679922_129684119_129684274_129694719_129694856_129701387_129701593_129704238_129704392_129734931_129735110_129737066
H1_mix_00072088	chr5	+	587	3	FSM	ENSG00000131435.13	ENST00000463615.1	582	3	-48	43	-48	-43	multi-exon	FALSE	canonical	3	199	junction_1	3	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGATGAGCACCTGGTGT	-3	True	NA	NA	False	NA	NA	NA	132257647	132266718	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_132257828_132262608_132262761_132266463
H1_mix_00072090	chr5	+	3443	1	FSM	ENSG00000198944.6	ENST00000378693.4	3485	1	41	1	41	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTGCTTGAGTGGTGAT	-11	True	NA	NA	False	AATAAA	-15	NA	132813342	132816785	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_132813300_132816800
H1_mix_00072091	chr5	+	233	1	FSM	ENSG00000272023.1	ENST00000607688.1	395	1	60	102	60	-102	mono-exon	FALSE	NA	NA	NA	NA	NA	229	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCCAGGTGTCGAAGCC	NA	False	NA	NA	False	NA	NA	NA	132963829	132964062	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_132963800_132964100
H1_mix_00072094	chr5	+	1463	9	FSM	ENSG00000043143.22	ENST00000431355.2	1552	9	89	0	89	0	multi-exon	FALSE	canonical	3	11	junction_1	33.2694961639037	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTCCCCATGCCGCCTG	70	False	NA	NA	False	NA	NA	NA	134524400	134566580	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_134524430_134535857_134535916_134537988_134538084_134552051_134552210_134559829_134559991_134560745_134560958_134562199_134562368_134564493_134564611_134566115
H1_mix_00072098	chr5	+	964	2	NIC	ENSG00000164615.6	novel	4285	3	NA	NA	1435	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTAATGTTAACTCTGC	2627	False	NA	15	True	AATAAA	-16	NA	134741178	134751377	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_134741524_134750758
H1_mix_00072100	chr5	+	398	2	FSM	ENSG00000145833.16	ENST00000509255.1	398	2	0	0	0	0	multi-exon	FALSE	canonical	3	593	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATAAGTGTTCTTTCAAA	2852	False	NA	NA	False	NA	NA	NA	134773784	134777894	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_134773862_134777573
H1_mix_00072102	chr5	+	766	8	FSM	ENSG00000145833.16	ENST00000509178.5	766	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	271.992571927385	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGGAGGCAGGAGTGTGG	4439	False	NA	NA	False	AGTAAA	-15	NA	134782069	134794968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_134782087_134782944_134783066_134784365_134784542_134785464_134785587_134788512_134788592_134789215_134789265_134790469_134790553_134794849
H1_mix_00072103	chr5	+	2987	6	NNC	ENSG00000113621.15	novel	3090	5	NA	NA	-585	0	at_least_one_novel_splicesite	FALSE	non_canonical	2	11	junction_5	47.9207679404243	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCACGCCTGTAATCCCAG	15	False	NA	5	True	AATAAA	-17	NA	134873785	134901635	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_134874531_134887694_134888183_134893491_134893656_134896293_134896425_134899488_134900385_134901072
H1_mix_00072104	chr5	+	2401	6	NNC	ENSG00000113621.15	novel	2893	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_5	49.4586696141334	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTAGTGAGTCCACCTCTT	14	True	NA	15	True	TATAAA	-18	NA	134874396	134901511	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_134874531_134887694_134888183_134893491_134893656_134896293_134896425_134899488_134900460_134900998
H1_mix_00072105	chr5	+	2365	4	FSM	ENSG00000132570.15	ENST00000254908.11	2365	4	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_3	4.92160768674447	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAGCTATCTTGGTGTGT	-1	True	NA	24	True	ATTAAA	-17	NA	134905130	134962644	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_134905224_134910334_134910467_134959039_134959121_134960585
H1_mix_00072106	chr5	+	447	1	FSM	ENSG00000279799.1	ENST00000623591.1	457	1	-11	21	-11	-21	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGTCTTTTTTGGTGAC	40	False	NA	-13	True	NA	NA	NA	134905223	134905670	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_134905200_134905700
H1_mix_00072108	chr5	+	642	5	FSM	ENSG00000120708.17	ENST00000604555.5	1173	5	0	531	0	43	multi-exon	FALSE	canonical	2	6	junction_1	5.30919014539883	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTCTGGGTCCTAAAT	77	False	NA	NA	False	NA	NA	NA	136047417	136054861	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_136047421_136049438_136049581_136052906_136053120_136053942_136054081_136054715
H1_mix_00072111	chr5	+	638	3	FSM	ENSG00000113658.18	ENST00000507637.1	638	3	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_1	10.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGTCCTGCTTAGTG	132	False	NA	7	True	AATAAA	-18	NA	136160985	136172829	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_136161108_136163271_136163392_136172433
H1_mix_00072112	chr5	+	1337	2	Intergenic	novelGene_1203	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	321	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTTAATCTTTTTAAAGC	NA	False	NA	NA	False	TTTAAA	-31	NA	136540980	136549035	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_136542200_136548917
H1_mix_00072114	chr5	+	236	1	Intergenic	novelGene_1208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTTGGCACCAGAGTTG	NA	False	NA	NA	False	AAAAAG	-22	NA	136568144	136568380	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_136568100_136568400
H1_mix_00072115	chr5	+	706	4	FSM	ENSG00000112984.12	ENST00000503417.1	598	4	-90	-18	-33	18	multi-exon	FALSE	canonical	3	496	junction_1	36.8872154908264	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTTATTATCATTATTT	-3	True	NA	NA	False	NA	NA	NA	138179078	138181914	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_138179203_138179659_138179846_138181421_138181512_138181608
H1_mix_00072116	chr5	+	4501	8	NNC	ENSG00000120709.11	novel	551	4	NA	NA	-10	0	intron_retention	FALSE	canonical	2	2	junction_4	57.5173443229013	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTGTACTACAGTGTCT	NA	False	NA	30	True	AATAAA	-33	NA	138332094	138349729	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_138332186_138333432_138333529_138335384_138335486_138336873_138336986_138341183_138341414_138341808_138341867_138344824_138345610_138346701
H1_mix_00072117	chr5	+	4611	5	FSM	ENSG00000120709.11	ENST00000434981.6	1686	5	-168	-2757	-168	0	multi-exon	FALSE	canonical	3	6	junction_1	53.6534015697048	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTGTACTACAGTGTCT	NA	False	NA	30	True	AATAAA	-33	NA	138337342	138349729	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_138337853_138341183_138341414_138341808_138341867_138344824_138345610_138346701
H1_mix_00072118	chr5	+	943	2	FSM	ENSG00000120733.14	ENST00000505756.1	654	2	0	-289	0	289	multi-exon	FALSE	canonical	3	309	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCACTTTCACTCTGAGG	NA	False	NA	NA	False	NA	NA	NA	138424134	138426146	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_138424342_138425410
H1_mix_00072125	chr5	+	2698	1	NIC	ENSG00000281398.4	novel	2383	5	NA	NA	8066	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTATGATTTTTTGTCAT	4414	False	NA	7	True	AATAAA	-8	NA	139282196	139284894	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_139282200_139284900
H1_mix_00072133	chr5	+	256	3	FSM	ENSG00000131508.16	ENST00000510470.1	256	3	0	0	0	0	multi-exon	FALSE	canonical	3	1957	junction_1	190	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATCAACAGAATGACAGT	-9	True	NA	NA	False	AATAAA	-40	NA	139561723	139614685	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_139561816_139600371_139600436_139614585
H1_mix_00072134	chr5	+	1229	3	FSM	ENSG00000171604.12	ENST00000507139.5	472	3	-757	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	8	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCGGCAGTAGCAGCAGCAG	9166	False	NA	NA	False	NA	NA	NA	139647903	139680556	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_139648846_139679846_139679941_139680363
H1_mix_00072135	chr5	+	384	2	FSM	ENSG00000171604.12	ENST00000511591.1	442	2	58	0	58	0	multi-exon	FALSE	canonical	3	42	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGATGCCGGCGGCAGTAG	4253	False	NA	NA	False	NA	NA	NA	139679740	139680547	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_139679941_139680363
H1_mix_00072136	chr5	+	380	5	FSM	ENSG00000146005.4	ENST00000651792.1	383	5	3	0	3	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2.95803989154981	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGCGAATCCTGGATGGT	NA	False	NA	NA	False	NA	NA	NA	139821892	139836881	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_139822006_139822725_139822788_139833701_139833792_139835722_139835767_139836810
H1_mix_00072137	chr5	+	1741	1	FSM	ENSG00000182700.5	ENST00000333305.5	3456	1	1067	648	1067	-648	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTATTTGAAAAAATGAAAT	1067	False	NA	-34	True	AATATA	-34	NA	140127003	140128744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140127000_140128700
H1_mix_00072138	chr5	+	913	3	FSM	ENSG00000120306.11	ENST00000644078.1	462	3	-580	129	-519	-129	multi-exon	FALSE	canonical	1	5	junction_2	222	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGGGCTGCTCTCTGC	6959	False	NA	NA	False	NA	NA	NA	140174636	140228786	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140175286_140194445_140194653_140228729
H1_mix_00072141	chr5	+	6462	26	NIC	ENSG00000131503.21	novel	8195	34	NA	NA	49	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_24	63.8230553953663	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGAAGTGGGGTGTGATC	37	False	NA	18	True	AATAAA	-14	NA	140459305	140539849	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_140459356_140464666_140464777_140482579_140482668_140485120_140485249_140485588_140485733_140486957_140487061_140496519_140497279_140504820_140504967_140505121_140505234_140505723_140505870_140506834_140506978_140507784_140507999_140509636_140509813_140510018_140510182_140512827_140512924_140513362_140513480_140524065_140524241_140525995_140526444_140526927_140527075_140527872_140528023_140528183_140529797_140535361_140535539_140537337_140537590_140538085_140538235_140538918_140539084_140539358
H1_mix_00072143	chr5	+	3649	10	FSM	ENSG00000131503.21	ENST00000433049.5	3649	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	60.7179270616732	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGAAGTGGGGTGTGAT	NA	False	NA	17	True	AATAAA	-13	NA	140524182	140539848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140524241_140525995_140526444_140526927_140527075_140527872_140528023_140528183_140529797_140535361_140535539_140537337_140537590_140538085_140538235_140538918_140539084_140539358
H1_mix_00072144	chr5	+	1175	5	NIC	ENSG00000254996.5	novel	5446	7	NA	NA	764	-9748	combination_of_known_splicesites	FALSE	canonical	3	22	junction_1	67.4068802126311	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAATATTCAATAAAAAGAT	1489	False	NA	-10	True	NA	NA	NA	140529677	140539821	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_140529797_140537337_140537590_140538085_140538262_140538918_140539084_140539358
H1_mix_00072147	chr5	+	3618	2	FSM	ENSG00000176087.16	ENST00000514199.1	3617	2	-2	1	-2	-1	multi-exon	FALSE	canonical	3	746	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGATTGTCTTGTGTCTTCT	63	False	NA	18	True	AATAAA	-39	NA	140564888	140569099	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140565972_140566564
H1_mix_00072148	chr5	+	815	4	FSM	ENSG00000113119.13	ENST00000505086.2	811	4	-4	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	40.1081870279207	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCTGATCGTGGAGAGTG	39	False	NA	NA	False	NA	NA	NA	140639490	140642337	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140639609_140639738_140639852_140641664_140641781_140641869
H1_mix_00072151	chr5	+	569	5	FSM	ENSG00000113141.19	ENST00000513256.5	569	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	337.105602890252	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGATTATGAAGAAACCGA	4743	False	NA	NA	False	NA	NA	NA	140647057	140653073	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140647310_140648470_140648538_140651713_140651807_140652087_140652148_140652976
H1_mix_00072152	chr5	+	708	8	FSM	ENSG00000113141.19	ENST00000502899.2	690	8	-18	0	-18	0	multi-exon	FALSE	canonical	3	3	junction_1	262.156908926618	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTACAGTTTCTATACT	229	False	NA	NA	False	AATAAA	-23	NA	140648075	140654727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140648163_140648470_140648538_140651713_140651807_140652087_140652148_140652976_140653145_140653937_140654053_140654515_140654587_140654680
H1_mix_00072153	chr5	+	824	9	ISM	ENSG00000113141.19	ENST00000417647.7	1905	20	10908	179	-242	-178	internal_fragment	FALSE	non_canonical	3	707	junction_8	69.8587861331701	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTTGAAGTCAAAAGACCAA	6626	False	NA	NA	False	NA	NA	NA	140658736	140662301	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_140658777_140658938_140659165_140659314_140659334_140659755_140659835_140660114_140660196_140660757_140660816_140661619_140661709_140661898_140662008_140662178
H1_mix_00072154	chr5	+	493	5	FSM	ENSG00000113141.19	ENST00000515015.1	493	5	0	0	0	0	multi-exon	FALSE	non_canonical	3	739	junction_2	43.808532273976	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCCTAAAAAATCTATCTCA	24	False	NA	NA	False	NA	NA	NA	140658978	140660885	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140659165_140659314_140659334_140659755_140659835_140660114_140660196_140660757
H1_mix_00072155	chr5	+	1964	3	FSM	ENSG00000113141.19	ENST00000515592.1	1964	3	0	0	0	0	multi-exon	FALSE	canonical	3	707	junction_2	58	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTTTGTTGAGCATGT	1200	False	NA	51	True	ATTAAA	-16	NA	140660154	140662479	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140661709_140661898_140662008_140662178
H1_mix_00072156	chr5	+	2477	6	FSM	ENSG00000120314.19	ENST00000506393.5	2477	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	54.7262277157854	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTGACTCTAAGATCTT	16	True	NA	25	True	AGTAAA	-18	NA	140664867	140672344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140665104_140668233_140668503_140668611_140668792_140668890_140669249_140669332_140669691_140671268
H1_mix_00072158	chr5	+	2307	14	FSM	ENSG00000112855.17	ENST00000645749.1	2292	14	-15	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	33.8922762666149	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCATACCGTGCCATGGA	-10	True	NA	-58	True	NA	NA	NA	140691454	140699235	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140691516_140691606_140691757_140693590_140693666_140693934_140694055_140694184_140694281_140695507_140695634_140695737_140695846_140696102_140696202_140696520_140696615_140696942_140697071_140697163_140697407_140697568_140697686_140697931_140698079_140698492
H1_mix_00072164	chr5	+	5423	4	FSM	ENSG00000250120.8	ENST00000307360.6	5409	4	-14	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	68.8202166679401	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGGTGGTCATTTCTAA	7507	False	NA	NA	False	AATAAA	-20	NA	140855882	141012347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140858437_140978948_140979008_140982474_140982564_141009626
H1_mix_00072167	chr5	+	4167	1	FSM	ENSG00000248383.5	ENST00000409700.4	4077	1	-34	-56	-34	56	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGCCACTGCAGCTGGC	NA	False	NA	NA	False	NA	NA	NA	140926334	140930501	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140926300_140930500
H1_mix_00072168	chr5	+	3424	1	FSM	ENSG00000113205.5	ENST00000231130.3	3355	1	-79	10	-79	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAAAAAACTGACTGTTC	4620	False	NA	NA	False	ATTAAA	-9	NA	141100393	141103817	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141100400_141103800
H1_mix_00072171	chr5	+	466	1	FSM	ENSG00000255622.3	ENST00000539533.3	2393	1	1553	374	1553	-374	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCCCTGAGGCGGCCCCG	1701	False	NA	NA	False	NA	NA	NA	141157548	141158014	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141157500_141158000
H1_mix_00072172	chr5	+	1913	1	FSM	ENSG00000272674.4	ENST00000609684.3	3840	1	-30	1957	-30	0	mono-exon	FALSE	NA	NA	NA	NA	NA	276	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCACTGAGCTGGTGCC	4538	False	NA	NA	False	NA	NA	NA	141182356	141184269	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141182400_141184300
H1_mix_00072174	chr5	+	4381	1	FSM	ENSG00000177839.7	ENST00000316105.7	4381	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAGTAAATGAAAGAAAAAAA	-1	True	NA	NA	False	AATACA	-45	NA	141187160	141191541	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141187200_141191500
H1_mix_00072175	chr5	+	4071	1	FSM	ENSG00000197479.7	ENST00000354757.5	4153	1	15	67	15	-67	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCATGGCTTATAATCCA	29	False	NA	118	True	NA	NA	NA	141199641	141203712	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141199600_141203700
H1_mix_00072177	chr5	+	2052	1	FSM	ENSG00000272070.2	ENST00000691212.1	3119	1	1202	-135	1194	132	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGGGGTAAAGATAAGTAAG	1199	False	NA	NA	False	NA	NA	NA	141327443	141329495	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141327400_141329500
H1_mix_00072178	chr5	+	2592	1	FSM	ENSG00000254221.3	ENST00000611598.1	2592	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATATATGGCGGCCGG	-13	True	NA	NA	False	NA	NA	NA	141350101	141352693	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141350100_141352700
H1_mix_00072180	chr5	+	2644	1	FSM	ENSG00000253910.3	ENST00000622527.1	2588	1	-32	-24	16	24	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCCAATGTTGTGCCTTA	10	True	NA	NA	False	NA	NA	NA	141360009	141362653	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141360000_141362700
H1_mix_00072181	chr5	+	923	1	FSM	ENSG00000253537.3	ENST00000617050.1	3262	1	-884	3223	-884	-3223	mono-exon	FALSE	NA	NA	NA	NA	NA	199	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGCCTCTATCCTGCTGG	7752	False	NA	NA	False	ACTAAA	-2	NA	141381854	141382777	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141381900_141382800
H1_mix_00072184	chr5	+	553	1	FSM	ENSG00000253305.3	ENST00000616430.1	4601	1	3918	130	3918	-130	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGCTAAATAAGTTTAATG	3727	False	NA	NA	False	AGTAAA	-42	NA	141411938	141412491	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141411900_141412500
H1_mix_00072187	chr5	+	3868	1	FSM	ENSG00000253873.6	ENST00000622044.1	3633	1	-237	2	-237	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCTTCTGGCTATTTTTT	3076	False	NA	NA	False	ATTAAA	-14	NA	141420809	141424677	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141420800_141424700
H1_mix_00072189	chr5	+	2363	4	FSM	ENSG00000240184.7	ENST00000617641.4	2346	4	-17	0	-3	0	multi-exon	FALSE	canonical	3	6	junction_1	98.9376908294643	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACGTTTCTGTATAAGCG	-7	True	NA	26	True	AATAAA	-19	NA	141475962	141512977	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141476147_141494806_141494866_141505392_141505482_141510946
H1_mix_00072190	chr5	+	314	1	FSM	ENSG00000242020.3	ENST00000488078.3	310	1	-71	67	-71	-67	mono-exon	FALSE	NA	NA	NA	NA	NA	267	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGGGATGACATCTGTGA	1502	False	NA	NA	False	NA	NA	NA	141479244	141479558	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141479200_141479600
H1_mix_00072192	chr5	+	2134	8	NNC	ENSG00000164620.9	novel	2536	7	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	67.7209158899936	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGCTTCGCATCCTGGC	29	True	NA	14	True	AATAAA	-17	NA	141637009	141641064	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_141637742_141638130_141638410_141638794_141638861_141638954_141639022_141639463_141639650_141639919_141640296_141640411_141640446_141640670
H1_mix_00072193	chr5	+	4917	13	NNC	ENSG00000081791.9	novel	2203	13	NA	NA	-31	54	intron_retention	FALSE	canonical	3	40	junction_12	50.9217127886851	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTAGAAAATGCTTATCT	-11	True	NA	62	True	NA	NA	NA	141923823	141942101	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493_141934587_141937197_141937358_141938520_141938761_141938851
H1_mix_00072194	chr5	+	2318	14	NIC	ENSG00000081791.9	novel	2203	13	NA	NA	7	-1	combination_of_known_junctions	FALSE	canonical	1	3	junction_12	69.6624150529245	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTCATCACTCTTGCCCT	27	False	NA	13	True	AATAAA	-14	NA	141923861	141940145	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493_141934587_141937197_141937358_141938520_141938761_141938855_141938905_141939505
H1_mix_00072195	chr5	+	1272	6	NNC	ENSG00000081791.9	novel	1342	6	NA	NA	0	-48	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_5	62.8744781290469	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGATTTTGAGGTCCCCAT	8750	False	NA	-60	True	AGTAAA	-38	NA	141934239	141940072	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_141934399_141934493_141934587_141937197_141937358_141938520_141938761_141938851_141938905_141939505
H1_mix_00072197	chr5	+	290	1	FSM	ENSG00000271871.1	ENST00000607378.1	957	1	-27	694	-27	-694	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTTTTAGACCTCCTCAG	NA	False	NA	NA	False	NA	NA	NA	141952391	141952681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141952400_141952700
H1_mix_00072198	chr5	+	562	4	FSM	ENSG00000013561.18	ENST00000514620.5	562	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	55.8231333966683	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGCAATTTTGCCTTCT	-18	True	NA	NA	False	NA	NA	NA	141969094	141980277	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141969168_141970703_141970878_141973582_141973743_141980122
H1_mix_00072202	chr5	+	4183	2	FSM	ENSG00000131507.11	ENST00000503388.1	4164	2	-19	0	-19	0	multi-exon	FALSE	canonical	3	479	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCATAGGAACCGCGGTTA	5187	False	NA	19	True	AATAAA	-16	NA	142142958	142154195	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_142144677_142151730
H1_mix_00072204	chr5	+	2202	1	FSM	ENSG00000261757.1	ENST00000566527.1	1640	1	-482	-80	-482	80	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCATTTCCACAATCAAC	NA	False	NA	NA	False	NA	NA	NA	142703299	142705501	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_142703300_142705500
H1_mix_00072205	chr5	+	2752	5	FSM	ENSG00000236714.3	ENST00000667174.1	2752	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	11.1915146427997	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTCATTCTTTTATGCAC	NA	False	NA	43	True	TATAAA	-22	NA	142745248	142761035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_142745719_142753100_142753228_142756733_142756831_142757826_142757935_142759085
H1_mix_00072209	chr5	+	304	1	Intergenic	novelGene_1211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAAGGCAGGAAAATCGCT	772	False	NA	NA	False	NA	NA	NA	143333361	143333665	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_143333400_143333700
H1_mix_00072210	chr5	+	228	1	FSM	ENSG00000239317.1	ENST00000495857.1	238	1	13	-3	13	3	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACGAAAAGTCAATAAAAGT	NA	False	NA	NA	False	TTTAAA	-3	NA	146138783	146139011	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_146138800_146139000
H1_mix_00072211	chr5	+	4184	22	NIC	ENSG00000113649.13	novel	3518	23	NA	NA	0	-11	combination_of_known_junctions	FALSE	canonical	3	114	junction_20	208.284973979132	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTTTTTATATATCTGTA	-1	True	NA	4	True	AATAAA	-4	NA	146447345	146511494	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_146447409_146455055_146455282_146457182_146457336_146458883_146459338_146463550_146463794_146469543_146469745_146470635_146470749_146471487_146471577_146478492_146478654_146479854_146479912_146480027_146480095_146482591_146482728_146483539_146483630_146492919_146493039_146498535_146498687_146503374_146503540_146503823_146504007_146507027_146507208_146507872_146507957_146509144_146509246_146510066_146510161_146510440
H1_mix_00072214	chr5	+	3498	7	ISM	ENSG00000113649.13	ENST00000506524.5	3787	11	20570	6	-1286	-3	3prime_fragment	FALSE	canonical	3	114	junction_5	340.915271324448	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATCTGTATTGTATAT	NA	False	NA	12	True	AATAAA	-12	NA	146501745	146511502	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_146503540_146503823_146504007_146507027_146507208_146507872_146507957_146509144_146509246_146510066_146510161_146510440
H1_mix_00072217	chr5	+	2349	6	NNC	ENSG00000286468.1	novel	2387	3	NA	NA	-50964	-417	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_2	37.7019893374342	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAATTCAAGGTTCCTAA	21	False	NA	NA	False	NA	NA	NA	147042294	147096823	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_147042377_147055847_147056031_147063146_147063305_147093302_147093462_147093948_147094057_147095164
H1_mix_00072218	chr5	+	2458	4	NNC	ENSG00000286468.1	novel	2387	3	NA	NA	-50372	31	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.7262385167301	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTACTTTCAATTAATATTT	613	False	NA	NA	False	AATAAA	-21	NA	147042886	147097271	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_147042971_147093302_147093462_147093948_147094057_147095164
H1_mix_00072220	chr5	+	8229	2	Antisense	novelGene_ENSG00000288774.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	44	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTCTGGTTTCATCTCCA	NA	False	NA	NA	False	NA	NA	NA	147857131	147874568	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr5_+_147864767_147873974
H1_mix_00072223	chr5	+	2682	27	FSM	ENSG00000133710.16	ENST00000508733.5	2674	27	-8	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	5.1539896650513	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACGTAAAAAGGTTTATCA	-8	True	NA	NA	False	AATAAA	-24	NA	148063971	148123960	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_148064100_148065346_148065373_148070379_148070451_148072147_148072221_148086404_148086533_148088541_148088606_148089493_148089622_148091164_148091229_148094353_148094482_148095817_148095906_148097866_148097995_148099233_148099316_148100453_148100582_148101354_148101437_148101780_148101909_148104951_148105001_148107036_148107165_148108752_148108838_148111767_148111896_148112867_148112935_148114361_148114490_148116369_148116467_148118436_148118565_148118985_148119059_148120008_148120137_148120294_148120392_148123832
H1_mix_00072224	chr5	+	3583	20	FSM	ENSG00000145868.17	ENST00000513826.1	3585	20	2	0	2	0	multi-exon	FALSE	canonical	3	9	junction_13	23.1886159862408	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTTGCCTTGGACCTGA	40	False	NA	20	True	AATAAA	-17	NA	148394713	148442835	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_148394905_148398998_148399133_148401981_148402146_148402347_148402514_148404684_148404823_148406256_148406395_148409123_148409218_148410634_148410766_148414135_148414307_148415927_148416071_148416993_148417205_148423997_148424118_148425521_148425702_148433423_148433525_148433634_148433738_148438331_148438499_148439646_148439793_148440423_148440528_148441123_148441238_148441968
H1_mix_00072225	chr5	+	1303	9	FSM	ENSG00000157510.14	ENST00000455574.6	1289	9	-14	0	-2	0	multi-exon	TRUE	canonical	3	27	junction_2	3.95087015731978	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATGCATGAACAAACGAG	-19	True	NA	NA	False	AATAAA	-16	NA	149271856	149312375	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_149271985_149299508_149299638_149300270_149300355_149301132_149301231_149302417_149302527_149306305_149306405_149307401_149307614_149309955_149310136_149312111
H1_mix_00072226	chr5	+	604	5	FSM	ENSG00000145882.11	ENST00000510990.6	582	5	-22	0	-22	0	multi-exon	FALSE	canonical	1	2	junction_2	15.352117117844	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCGGGTGTGGAGGAGC	-14	True	NA	NA	False	NA	NA	NA	149358014	149365971	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_149358157_149362636_149362844_149362966_149363017_149364035_149364211_149365941
H1_mix_00072227	chr5	+	4709	19	NIC	ENSG00000113716.13	novel	5258	20	NA	NA	17	-34	intron_retention	FALSE	canonical	3	7	junction_3	41.6576656944567	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTCCCCCAACAAGAATAA	19	True	NA	-20	True	NA	NA	NA	150000755	150053094	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_150001180_150004850_150004990_150006472_150006648_150012254_150012354_150018565_150018698_150024261_150024681_150026705_150026882_150027019_150027118_150030740_150030840_150032453_150032604_150036635_150036938_150037399_150037528_150040747_150040880_150041784_150041970_150045465_150045686_150047623_150047758_150048568_150048686_150050251_150050462_150051724
H1_mix_00072230	chr5	+	3187	17	NIC	ENSG00000070814.22	novel	3526	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	348.428705045953	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGGTAACTCCCTGTATT	1	True	NA	3	True	AGTAAA	-17	NA	150357703	150384253	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150383737
H1_mix_00072231	chr5	+	3931	25	NIC	ENSG00000070814.22	novel	4800	26	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	336.840587811538	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTGTTACCTTCCCTCG	1	True	NA	NA	False	NA	NA	NA	150357703	150399883	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150372005_150372237_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150387901_150388089_150389886_150390024_150391956_150392177_150392707_150392791_150393371_150393553_150398353_150398452_150399021_150399071_150399809
H1_mix_00072232	chr5	+	4656	28	NNC	ENSG00000070814.22	novel	4646	27	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	329.892404623474	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTGTTACCTTCCCTCG	44	False	NA	NA	False	NA	NA	NA	150357746	150399883	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150372005_150372237_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150383061_150383173_150387901_150388089_150389886_150390024_150391543_150391658_150391956_150392177_150392704_150392791_150393371_150393532_150396281_150396843_150398353_150398452_150399021_150399071_150399809
H1_mix_00072233	chr5	+	5120	10	FSM	ENSG00000070814.22	ENST00000515035.5	5240	10	75	45	75	-45	multi-exon	FALSE	canonical	0	0	junction_8	309.124570359588	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCCAACATGGTGAAACCC	9945	False	NA	NA	False	NA	NA	NA	150367647	150380814	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_150368903_150369528_150369603_150372005_150372237_150374173_150374387_150374616_150375555_150375720_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531
H1_mix_00072235	chr5	+	1626	9	NNC	ENSG00000070814.22	novel	3726	19	NA	NA	69	-45	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	402.673856085791	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGTTGAAGGTGGAGATCAA	3773	False	NA	-47	True	NA	NA	NA	150379344	150396779	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_150379409_150379531_150379733_150387942_150388089_150389886_150390024_150391543_150391658_150391956_150392177_150392704_150392791_150393371_150393532_150396281
H1_mix_00072236	chr5	+	1663	9	NNC	ENSG00000070814.22	novel	3726	19	NA	NA	73	-45	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	316.889866515166	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGTTGAAGGTGGAGATCAA	3777	False	NA	-47	True	NA	NA	NA	150379348	150396779	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_150379409_150379531_150379733_150387901_150388089_150389886_150390024_150391543_150391658_150391956_150392177_150392704_150392791_150393371_150393532_150396281
H1_mix_00072240	chr5	+	5149	6	NNC	ENSG00000164591.14	novel	665	3	NA	NA	-991	359	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28.1211664053965	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAGCACTTTGAGAGGCC	6776	False	NA	35	True	AAGAAA	-40	NA	150668101	150679727	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_150669174_150669953_150670639_150671596_150671651_150671754_150671909_150672339_150672503_150676706
H1_mix_00072241	chr5	+	10012	13	FSM	ENSG00000145907.16	ENST00000678925.1	10011	13	-1	0	-1	0	multi-exon	FALSE	canonical	2	26	junction_12	852.983326657418	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTATCTCTCTGTTGTCC	NA	False	NA	NA	False	AATAAA	-28	NA	151771904	151812785	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_151772037_151786571_151786716_151790322_151790405_151790888_151791063_151794158_151794250_151795478_151795576_151797226_151797429_151799211_151799314_151799888_151800001_151800217_151800347_151800759_151800870_151803884_151804142_151804405
H1_mix_00072244	chr5	+	11945	11	FSM	ENSG00000145907.16	ENST00000677757.1	11945	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_8	935.41681083889	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTATCTCTCTGTTGTCC	5	True	NA	NA	False	AATAAA	-28	NA	151771929	151812785	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_151772037_151786571_151786716_151790322_151790405_151790888_151791063_151794158_151794250_151795478_151797429_151799211_151799314_151799888_151800044_151800217_151800347_151800759_151800870_151803884
H1_mix_00072247	chr5	+	5328	3	NIC	ENSG00000037749.13	novel	5037	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	57.5	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTATAGTGTATGTTTC	-13	True	NA	29	True	ATTAAA	-31	NA	154038966	154057450	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_154039303_154049556_154050018_154052919
H1_mix_00072248	chr5	+	5524	3	NNC	ENSG00000037749.13	novel	5037	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	59	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTATAGTGTATGTTTC	-13	True	NA	29	True	ATTAAA	-31	NA	154038966	154057450	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_154039499_154049556_154050018_154052919
H1_mix_00072249	chr5	+	1432	9	NIC	ENSG00000164574.16	novel	5958	12	NA	NA	-2	-41	combination_of_known_junctions	FALSE	canonical	1	2	junction_8	33.6449754792599	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACAATAAAGACTGGAACA	9	True	NA	NA	False	NA	NA	NA	154190745	154406215	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_154191026_154294815_154294919_154297940_154298080_154329571_154329739_154376276_154376463_154380447_154380632_154386312_154386431_154404103_154404212_154406068
H1_mix_00072250	chr5	+	579	1	FSM	ENSG00000221430.1	ENST00000408503.1	142	1	-576	139	-576	-139	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATGTGTGCCAAGATCTG	NA	False	NA	NA	False	AATAAA	-20	NA	154346529	154347108	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_154346500_154347100
H1_mix_00072252	chr5	+	6158	3	FSM	ENSG00000164576.12	ENST00000426761.2	777	3	-659	-4722	-111	0	multi-exon	FALSE	canonical	2	7	junction_1	127.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTGTCTTCCCTTTGAA	NA	False	NA	18	True	AATAAA	-21	NA	154445885	154461053	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_154446806_154453416_154453501_154455899
H1_mix_00072259	chr5	+	284	1	FSM	ENSG00000277039.1	ENST00000612810.1	316	1	68	-36	68	36	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAACTGTGTTAGCACTT	2301	False	NA	NA	False	ATTAAA	-3	NA	154822010	154822294	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_154822000_154822300
H1_mix_00072269	chr5	+	1447	7	FSM	ENSG00000113312.12	ENST00000684515.1	1447	7	0	0	0	0	multi-exon	FALSE	canonical	3	673	junction_2	47.1651943233096	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTAGGTCTGGGTTAGGT	1287	False	NA	10	True	AATAAA	-10	NA	160010432	160065537	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_160010859_160035139_160035201_160036690_160036804_160043132_160043170_160049513_160049663_160051128_160051184_160064931
H1_mix_00072274	chr5	+	865	4	FSM	ENSG00000164611.13	ENST00000523659.5	851	4	-14	0	0	0	multi-exon	FALSE	canonical	3	2239	junction_1	537.873797672114	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTTCTGTTTTGGAAAC	-5	True	NA	NA	False	NA	NA	NA	160421854	160424777	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_160421892_160422301_160422404_160422708_160422894_160424236
H1_mix_00072275	chr5	+	923	7	FSM	ENSG00000022355.18	ENST00000634335.1	1070	7	147	0	147	0	multi-exon	FALSE	canonical	3	43	junction_2	5.58022301426107	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTCCCAATCAAGATAC	15	True	NA	NA	False	NA	NA	NA	161850743	161891050	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_161850885_161854157_161854271_161865720_161865789_161873116_161873338_161875559_161875643_161882557_161882702_161890897
H1_mix_00072277	chr5	+	3527	9	FSM	ENSG00000113327.17	ENST00000639111.2	11548	9	497	7524	24	10	multi-exon	TRUE	canonical	1	4	junction_1	2.44629822384762	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGAAACCTTTTCACAAA	6	False	NA	-65	True	NA	NA	NA	162067961	162155453	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_162068107_162093827_162093980_162095494_162095563_162097637_162097859_162101234_162101318_162103888_162104027_162142163_162142317_162149107_162149314_162153092
H1_mix_00072278	chr5	+	1098	2	FSM	ENSG00000113328.19	ENST00000506186.1	580	2	-2	-516	0	516	multi-exon	FALSE	canonical	3	4393	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTGGAGGAAAATAAGATGA	NA	False	NA	NA	False	NA	NA	NA	163437568	163440118	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_163437805_163439256
H1_mix_00072279	chr5	+	2162	2	FSM	ENSG00000113328.19	ENST00000512532.1	540	2	-1622	0	0	0	multi-exon	FALSE	canonical	3	3989	junction_1	0	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTGTATTATTCACTCCT	NA	False	NA	NA	False	NA	NA	NA	163437568	163441287	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_163439521_163441077
H1_mix_00072280	chr5	+	3253	18	FSM	ENSG00000072571.20	ENST00000358715.3	2988	18	-183	-82	108	82	multi-exon	TRUE	canonical	3	14	junction_3	106.557488098661	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTGTCCCCAGAATCACA	NA	False	NA	95	True	NA	NA	NA	163460473	163492023	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_163460739_163463855_163463955_163464722_163464803_163467703_163467749_163469640_163469830_163471184_163471272_163471362_163471464_163473178_163473254_163473378_163473558_163474056_163474206_163475457_163475673_163478683_163478801_163482641_163482789_163483019_163483173_163483267_163483368_163484068_163484246_163490389_163490553_163491111
H1_mix_00072281	chr5	+	3509	5	FSM	ENSG00000038274.17	ENST00000518095.5	3409	5	-91	-9	-61	0	multi-exon	FALSE	canonical	3	419	junction_1	124.880943302011	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAACTTACCACCCCATC	720	False	NA	19	True	AATAAA	-30	NA	163505522	163519336	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_163505750_163512001_163512197_163513554_163513670_163513841_163513995_163516517
H1_mix_00072282	chr5	+	3222	6	FSM	ENSG00000038274.17	ENST00000523606.1	3210	6	-12	0	0	0	multi-exon	FALSE	canonical	3	419	junction_1	118.833328658251	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTTAGTTTTCTTGTAT	3	True	NA	16	True	AATAAA	-19	NA	163505613	163519149	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_163505750_163512001_163513670_163513841_163513995_163516517_163516712_163517560_163517675_163518192
H1_mix_00072283	chr5	+	557	4	FSM	ENSG00000038274.17	ENST00000520449.1	557	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	281.240506012598	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTCAGCAAACATGGATCA	28	True	NA	NA	False	GATAAA	-16	NA	163505638	163516615	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_163505750_163512001_163512197_163513841_163513995_163516517
H1_mix_00072284	chr5	+	4569	23	NIC	ENSG00000113645.15	novel	3562	23	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_7	31.0108285539633	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCTCTTGCTCTCTTTT	-15	True	NA	15	True	AATAAA	-19	NA	168291655	168469759	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_168292272_168371423_168371534_168385210_168385415_168397723_168397801_168399487_168399568_168406197_168406328_168408506_168408624_168409921_168409996_168414347_168414591_168422007_168422098_168423532_168424069_168428032_168428142_168428706_168428788_168430136_168430224_168431251_168431445_168441681_168441835_168444493_168444586_168453967_168454101_168455355_168455521_168460649_168460743_168464710_168464963_168467839_168467965_168468950
H1_mix_00072286	chr5	+	2077	10	FSM	ENSG00000113645.15	ENST00000524038.5	2077	10	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_7	24.3619821204989	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCTCTTGCTCTCTTTT	NA	False	NA	15	True	AATAAA	-19	NA	168430158	168469759	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_168430224_168431251_168431445_168441681_168441835_168444493_168444586_168453967_168454101_168455355_168455521_168460649_168460743_168464710_168464963_168467842_168467965_168468950
H1_mix_00072288	chr5	+	945	4	FSM	ENSG00000113643.9	ENST00000519346.1	945	4	0	0	0	0	multi-exon	FALSE	canonical	3	756	junction_2	70.6981062138317	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTTGAATTACGGCCCAA	2221	False	NA	NA	False	CATAAA	-8	NA	168488691	168495151	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_168488737_168492658_168492848_168493893_168494003_168494549
H1_mix_00072296	chr5	+	395	1	Genic_Genomic	ENSG00000094755.17	novel	NA	NA	NA	NA	-216	-24760	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCAAAGAGACGCTGGGA	NA	False	NA	NA	False	NA	NA	NA	170764077	170764472	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr5_+_170764100_170764500
H1_mix_00072299	chr5	+	4558	29	FSM	ENSG00000204764.14	ENST00000522533.5	4558	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	19.4005509599862	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCAGACTCATGTTTCT	3	True	NA	NA	False	AGTAAA	-26	NA	170862017	171300015	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_170862052_170878096_170878244_170881805_170881897_170892386_170892554_170896049_170896116_170909660_170909766_170910968_170911135_170914166_170914241_170916464_170916585_170918712_170918860_170919440_170919614_170924356_170924551_170953596_170953703_170968241_170968378_171028871_171028990_171170129_171170204_171171205_171171287_171183166_171183231_171183321_171183431_171199669_171199774_171205523_171205613_171213630_171213739_171221757_171221841_171240927_171241143_171242681_171242821_171265680_171265848_171293882_171293982_171295886_171296015_171298761
H1_mix_00072302	chr5	+	2508	10	FSM	ENSG00000181163.14	ENST00000677600.1	2506	10	-2	0	0	0	multi-exon	FALSE	canonical	2	214	junction_1	8249.11046308017	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTTAATAAAGTAGCAC	0	True	NA	-2	True	AATAAA	-6	NA	171387851	171410868	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_171388007_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171406396_171407775_171410526
H1_mix_00072303	chr5	+	3743	1	Genic_Genomic	ENSG00000214357.9	novel	NA	NA	NA	NA	46618	86	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAGTTGCAAAATGGCT	NA	False	NA	128	True	NA	NA	NA	172687883	172691626	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr5_+_172687900_172691600
H1_mix_00072304	chr5	+	1026	1	FSM	ENSG00000253785.1	ENST00000523057.1	864	1	-100	-62	-100	62	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGTAAAATAGTAGCTTT	NA	False	NA	NA	False	AATACA	-38	NA	172975410	172976436	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_172975400_172976400
H1_mix_00072305	chr5	+	1676	4	FSM	ENSG00000164463.12	ENST00000520420.5	1660	4	-16	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	5.73488351136175	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTAATTGGTTTTTCTA	-23	True	NA	NA	False	ATTAAA	-21	NA	173056351	173091536	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_173056480_173080584_173080785_173086500_173086627_173090314
H1_mix_00072306	chr5	+	2607	8	FSM	ENSG00000113742.14	ENST00000520867.5	2607	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	6.84224572275888	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGCAGTCTGTAACTTAAC	-10	True	NA	NA	False	NA	NA	NA	173889339	173956235	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_173890859_173910522_173910605_173944966_173945141_173949507_173949598_173949959_173950079_173951823_173951939_173953090_173953273_173955909
H1_mix_00072307	chr5	+	444	4	FSM	ENSG00000113742.14	ENST00000519152.5	441	4	-3	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	4.10960933531265	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTCGAAAGGTGTTTGTA	115	False	NA	NA	False	NA	NA	NA	173890673	173945092	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_173890859_173910522_173910605_173932449_173932501_173944966
H1_mix_00072308	chr5	+	5399	9	NIC	ENSG00000113742.14	novel	9418	10	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	6	junction_2	6.41774882649672	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTTAATATACTTATT	115	False	NA	4	True	AATAAA	-15	NA	173890673	173960310	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_173890859_173910522_173910605_173932449_173932501_173944966_173945141_173949507_173949598_173949959_173950079_173951823_173951939_173953090_173953273_173955909
H1_mix_00072309	chr5	+	5181	8	NIC	ENSG00000113742.14	novel	1348	8	NA	NA	5	1	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	5.65324541068839	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTTAATATACTTATT	8	True	NA	4	True	AATAAA	-15	NA	173918205	173960310	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_173918255_173932449_173932501_173944966_173945141_173949507_173949598_173949959_173950079_173951823_173951939_173953090_173953273_173955909
H1_mix_00072312	chr5	+	4437	4	FSM	ENSG00000145920.15	ENST00000393745.8	4597	4	61	99	-37	-98	multi-exon	FALSE	canonical	1	1	junction_1	0	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCAAAAGCCATGGCTGT	2	True	NA	-79	True	NA	NA	NA	175871638	175883922	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_175871706_175878651_175878771_175878907_175879084_175879847
H1_mix_00072313	chr5	+	2056	9	FSM	ENSG00000170085.18	ENST00000341199.10	2056	9	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	33.6888334615492	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACCAAGTTCAGTGTG	NA	False	NA	4	True	AATAAA	-17	NA	176238366	176345985	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_176238638_176295029_176295263_176296250_176296321_176313690_176313846_176322272_176322426_176324628_176324758_176336719_176336877_176337061_176337147_176345182
H1_mix_00072314	chr5	+	1757	8	NIC	ENSG00000170085.18	novel	3305	10	NA	NA	13	0	intron_retention	FALSE	canonical	0	0	junction_1	38.8686957615519	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAAGTTCAGTGTGACTC	7	True	NA	8	True	AATAAA	-21	NA	176238436	176345989	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_176238638_176296250_176296321_176313690_176313846_176322272_176322426_176324628_176324758_176336719_176336877_176337061_176337147_176345182
H1_mix_00072315	chr5	+	847	2	FSM	ENSG00000170085.18	ENST00000503595.1	847	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCGAGAGCCTCACCATGT	NA	False	NA	NA	False	NA	NA	NA	176270229	176290209	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_176270521_176289653
H1_mix_00072317	chr5	+	564	3	FSM	ENSG00000113194.13	ENST00000510730.5	684	3	120	0	120	0	multi-exon	FALSE	canonical	1	3	junction_1	153	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGGTTAATACAGCTGAC	NA	False	NA	NA	False	NA	NA	NA	176447747	176486427	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_176448170_176479187_176479257_176486354
H1_mix_00072318	chr5	+	823	3	FSM	ENSG00000113194.13	ENST00000506061.1	337	3	-74	-412	-30	412	multi-exon	FALSE	canonical	3	5	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAACCCAGGAGGCGAAG	0	True	NA	NA	False	NA	NA	NA	176448354	176453971	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_176448471_176453175_176453229_176453317
H1_mix_00072319	chr5	+	756	5	FSM	ENSG00000113194.13	ENST00000510446.1	756	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	132.380842647265	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTACCTTTGGATTTAT	1216	False	NA	NA	False	NA	NA	NA	176453138	176489027	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_176453229_176453317_176453703_176479187_176479257_176486354_176486490_176488950
H1_mix_00072320	chr5	+	892	8	FSM	ENSG00000048140.18	ENST00000504168.5	884	8	-8	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	151.638399100072	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGCCGCCAGAGGCCAT	10	True	NA	NA	False	NA	NA	NA	176647496	176656956	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_176647703_176651615_176651667_176651753_176651901_176652778_176652914_176654894_176655021_176656077_176656126_176656699_176656817_176656894
H1_mix_00072323	chr5	+	3941	16	FSM	ENSG00000113763.12	ENST00000509580.2	3941	16	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_6	15.622490909654	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTGCTACTTCTCTCA	-6	True	NA	16	True	AATAAA	-21	NA	176810518	176880898	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_176810821_176862623_176862846_176868129_176868274_176868560_176868665_176868783_176868965_176869613_176869782_176870369_176870535_176873967_176874157_176874263_176874567_176877191_176877280_176877534_176877704_176877893_176878128_176878243_176878394_176878474_176878640_176879309_176879489_176879720
H1_mix_00072325	chr5	+	12195	24	FSM	ENSG00000165671.22	ENST00000354179.9	12136	24	0	-59	0	-3	multi-exon	FALSE	canonical	3	14	junction_1	45.4464099954494	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATATGGCCCTTGCCCTGT	55	False	NA	24	True	AGTAAA	-15	NA	177133078	177300210	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_177133155_177135086_177135201_177135940_177136031_177191883_177192020_177204119_177204293_177209635_177212196_177235820_177235946_177238236_177238508_177239755_177239866_177244194_177244271_177246677_177246797_177248180_177248325_177251729_177251854_177256950_177257152_177259988_177260169_177267561_177267719_177269601_177269808_177273671_177273785_177280564_177280835_177282464_177282582_177283786_177283929_177288818_177288926_177291953_177292159_177293831
H1_mix_00072327	chr5	+	12192	24	FSM	ENSG00000165671.22	ENST00000347982.9	7688	24	-56	-4448	0	-3	multi-exon	FALSE	canonical	3	17	junction_1	44.9525689961906	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATATGGCCCTTGCCCTGT	-9	True	NA	24	True	AGTAAA	-15	NA	177134172	177300210	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_177134246_177135086_177135201_177135940_177136031_177191883_177192020_177204119_177204293_177209635_177212196_177235820_177235946_177238236_177238508_177239755_177239866_177244194_177244271_177246677_177246797_177248180_177248325_177251729_177251854_177256950_177257152_177259988_177260169_177267561_177267719_177269601_177269808_177273671_177273785_177280564_177280835_177282464_177282582_177283786_177283929_177288818_177288926_177291953_177292159_177293831
H1_mix_00072338	chr5	+	2107	8	FSM	ENSG00000145916.19	ENST00000507575.5	2092	8	-15	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	106.068326072953	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTGCCCTTCTCATTT	NA	False	NA	54	True	NA	NA	NA	178130995	178148549	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_178131055_178138107_178138259_178142582_178142993_178143626_178144109_178146113_178146280_178147532_178147636_178147728_178147884_178147968
H1_mix_00072339	chr5	+	4066	12	FSM	ENSG00000145916.19	ENST00000515098.5	4066	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	135.441244008287	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATGGAGTCTCACTTTG	NA	False	NA	3	True	ATTAAA	-15	NA	178130995	178150565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_178131055_178131236_178131377_178135172_178135313_178138107_178138259_178142582_178142729_178142851_178142993_178143626_178143728_178143941_178144109_178146113_178146280_178147532_178147636_178147728_178147884_178147968
H1_mix_00072340	chr5	+	1826	11	NIC	ENSG00000145916.19	novel	3911	11	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	2	11	junction_3	115.667627277471	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTACTGCCCTTCTCATT	9	True	NA	53	True	NA	NA	NA	178131028	178148548	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_178131055_178131236_178131377_178138107_178138259_178142632_178142729_178142851_178142993_178143626_178143728_178143941_178144109_178146113_178146280_178147532_178147636_178147728_178147884_178147968
H1_mix_00072342	chr5	+	578	2	FSM	ENSG00000197451.12	ENST00000504796.1	578	2	0	0	0	0	multi-exon	FALSE	canonical	3	2009	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTACTTTGGCGAGTTTGG	543	False	NA	NA	False	NA	NA	NA	178205567	178206866	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_178206011_178206731
H1_mix_00072350	chr5	+	2476	16	NIC	ENSG00000176783.15	novel	2642	17	NA	NA	48	-3	intron_retention	FALSE	canonical	3	19	junction_5	71.6558441440752	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACTCTGGTGCGTGCAGA	16	True	NA	11	True	AATAAA	-12	NA	179559788	179610008	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_179560199_179562546_179562665_179567460_179567563_179569301_179569426_179577074_179577137_179585795_179585866_179589545_179589648_179591624_179591742_179593477_179593646_179594865_179594964_179596561_179596682_179598691_179598822_179601891_179601987_179605875_179605925_179607581_179607660_179609375
H1_mix_00072359	chr5	+	5264	15	FSM	ENSG00000127022.16	ENST00000681076.1	5260	15	-4	0	0	0	multi-exon	FALSE	canonical	3	37	junction_13	1300.4152319587	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTAAAATTTGTTTGAAT	43	False	NA	NA	False	AAGAAA	-13	NA	179699094	179731453	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_179699771_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726682_179726760_179728590
H1_mix_00072360	chr5	+	3996	2	FSM	ENSG00000161021.13	ENST00000511027.1	890	2	-290	-2816	-290	1	multi-exon	FALSE	canonical	3	115	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTTGTATTTGACGTCA	3517	False	NA	27	True	AATAAA	-22	NA	179770637	179777284	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_179771244_179773894
H1_mix_00072373	chr5	+	6131	12	NIC	ENSG00000113300.13	novel	6219	12	NA	NA	3	-2	intron_retention	FALSE	canonical	3	64	junction_5	51.7043406589351	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTGTGTTGGGGTTATA	4	True	NA	16	True	AATAAA	-21	NA	180494449	180578356	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_180494764_180529274_180529389_180549930_180550118_180553385_180553472_180564488_180564579_180564674_180564744_180565819_180565978_180567087_180567243_180567848_180568004_180569109_180569341_180571229_180571433_180573987
H1_mix_00072374	chr5	+	2105	10	NIC	ENSG00000113300.13	novel	6250	13	NA	NA	7	1954	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	100.668260963583	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAACTGTTTCTTTCTTTTT	68	False	NA	NA	False	AATAAA	-19	NA	180494513	180569922	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_180494764_180495420_180495589_180529274_180529389_180549930_180550118_180553385_180553472_180564488_180564594_180564674_180564744_180565819_180565978_180567087_180567243_180569109
H1_mix_00072380	chr5	+	1868	1	FSM	ENSG00000233937.8	ENST00000599439.2	1868	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCTTGTACTGTTAACTA	8610	False	NA	8	True	AATAAA	-17	NA	181255718	181257586	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_181255700_181257600
H1_mix_00072381	chr5	+	823	3	FSM	ENSG00000248275.3	ENST00000433265.4	849	3	22	4	5	-4	multi-exon	FALSE	canonical	3	22	junction_2	72.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACCTGCGTGTGATGGTG	29	False	NA	NA	False	AATAAA	-22	NA	181261226	181264577	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_181261385_181263627_181263767_181264051
H1_mix_00072386	chr5	-	1515	3	Antisense	novelGene_ENSG00000286001.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_2	4.5	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCGGGAGGCGGAGCTCAC	NA	False	NA	NA	False	NA	NA	NA	260811	258117	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr5_-_258733_259496_260041_260455
H1_mix_00072387	chr5	-	912	2	Antisense	novelGene_ENSG00000286001.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	8	junction_1	0	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGGCGGAGCTCACACGG	8804	False	NA	NA	False	NA	NA	NA	262685	260876	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr5_-_261320_262216
H1_mix_00072388	chr5	-	2707	2	Fusion	ENSG00000188242.4_ENSG00000221990.5	novel	1876	2	NA	NA	0	87	intron_retention	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGACCAGCCTGGGCAA	-23	True	NA	NA	False	NA	NA	NA	473098	441410	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr5_-_441530_470510
H1_mix_00072389	chr5	-	2360	2	FSM	ENSG00000188242.4	ENST00000342584.3	1876	2	0	-484	0	484	multi-exon	FALSE	canonical	3	15	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACGAATTCTAATTCATATG	-23	True	NA	NA	False	NA	NA	NA	473098	470025	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_471966_472678
H1_mix_00072390	chr5	-	409	4	NNC	ENSG00000206077.14	novel	585	5	NA	NA	-3	-596	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	38.4389848403357	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCTACGGAGATGAGACAG	12	True	NA	NA	False	NA	NA	NA	784712	767430	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_767525_768834_768931_769943_770118_784667
H1_mix_00072392	chr5	-	2528	3	NIC	ENSG00000188818.13	novel	489	2	NA	NA	-115	-60	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	4	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTAATGAAAGTGCAA	6710	False	NA	NA	False	NA	NA	NA	843861	839501	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_840651_840802_841920_843599
H1_mix_00072393	chr5	-	235	2	FSM	ENSG00000188818.13	ENST00000503880.1	493	2	0	258	0	-258	multi-exon	FALSE	canonical	2	8	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACGTGGCCGCCGCTCTCA	2948	False	NA	NA	False	NA	NA	NA	847623	843599	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_843725_847513
H1_mix_00072397	chr5	-	2482	17	NNC	ENSG00000049656.14	novel	2492	17	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	144	junction_14	239.537542725561	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGCAAGCCTTTGAGTC	1	True	NA	-17	True	ATTAAA	-19	NA	1345093	1317752	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_1318454_1320615_1320732_1321634_1321680_1321763_1321820_1322876_1322912_1323786_1323870_1324762_1324814_1325750_1325817_1330279_1330384_1331798_1331884_1334288_1334384_1335056_1335175_1337903_1337983_1338859_1339003_1341670_1341861_1344350_1344452_1344679
H1_mix_00072406	chr5	-	2600	9	FSM	ENSG00000185986.13	ENST00000652578.1	2585	9	0	-15	0	15	multi-exon	FALSE	canonical	0	0	junction_1	27.771106837863	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTCTGTGTCTTATT	3	True	NA	0	True	NA	NA	NA	1594476	1567479	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_1568999_1572181_1572287_1574181_1574296_1576178_1576310_1579276_1579485_1584983_1585134_1589246_1589366_1593112_1593285_1594394
H1_mix_00072409	chr5	-	916	4	NIC	ENSG00000188002.11	novel	1033	5	NA	NA	37	221	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	22.4251842554055	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACCTGGGTCTCGCAGAG	99	False	NA	NA	False	NA	NA	NA	1633906	1598698	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_1599270_1599626_1599828_1602690_1602736_1633807
H1_mix_00072410	chr5	-	1016	4	FSM	ENSG00000188002.11	ENST00000522848.5	1130	4	0	114	0	-114	multi-exon	FALSE	canonical	2	6	junction_1	61.4184192422943	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCCCTGTGTTGCCCAGG	17	True	NA	NA	False	NA	NA	NA	1633947	1602029	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_1602736_1632643_1632752_1632844_1632907_1633807
H1_mix_00072411	chr5	-	1353	3	FSM	ENSG00000188002.11	ENST00000689007.1	1381	3	22	6	0	-1	multi-exon	FALSE	canonical	3	29	junction_1	56	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTTTTTTGTTTGTTTGTT	-20	True	NA	-6	True	TTTAAA	-40	NA	1633984	1628516	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_1629631_1632844_1632907_1633807
H1_mix_00072413	chr5	-	688	2	FSM	ENSG00000171421.13	ENST00000508987.1	686	2	0	-2	0	0	multi-exon	FALSE	canonical	3	319	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTAGTTCATTCATTCTCT	1764	False	NA	-9	True	ATTAAA	-17	NA	1799895	1798384	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_1798948_1799770
H1_mix_00072414	chr5	-	2257	6	FSM	ENSG00000113430.10	ENST00000505790.5	2538	6	281	0	47	0	multi-exon	FALSE	canonical	2	4	junction_4	1.6	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAAAACCGAGTGATGGT	196	False	NA	-21	True	AATATA	-8	NA	1886937	1877447	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_1878793_1879503_1879833_1880724_1880835_1881807_1882060_1882602_1882748_1886861
H1_mix_00072416	chr5	-	3217	18	FSM	ENSG00000037474.15	ENST00000504374.5	3217	18	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_13	183.52684764423	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATGTGTGATTCCTGTT	17	True	NA	NA	False	AATAAA	-14	NA	6633291	6599239	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_6600233_6602460_6602501_6604137_6604277_6604604_6604686_6605272_6605409_6606819_6606913_6607199_6607385_6609825_6609923_6610954_6611086_6611724_6611799_6616726_6616858_6617949_6618025_6620105_6620299_6623213_6623286_6625563_6625670_6631872_6631978_6632598_6632757_6632883
H1_mix_00072418	chr5	-	637	6	FSM	ENSG00000124279.12	ENST00000282110.8	637	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	35.1533782160406	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATTAAAAGAAAAATATAAT	17	True	NA	NA	False	NA	NA	NA	7869010	7859380	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_7859540_7861148_7861264_7861582_7861653_7862822_7862998_7865897_7865984_7868978
H1_mix_00072422	chr5	-	1160	4	FSM	ENSG00000150756.14	ENST00000510047.5	1160	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	23.3666428910958	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAGAAATAATTTGTTCC	-6	True	NA	NA	False	NA	NA	NA	10249897	10226955	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_10227648_10236477_10236616_10239066_10239357_10249857
H1_mix_00072426	chr5	-	901	4	FSM	ENSG00000164237.9	ENST00000506821.1	901	4	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_2	18.3726850393609	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGTCACCGGGAGTCAAG	14	True	NA	NA	False	AATAGA	-30	NA	10307859	10286172	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_10286497_10288421_10288530_10290547_10290782_10307624
H1_mix_00072427	chr5	-	1512	1	FSM	ENSG00000259802.1	ENST00000561606.1	901	1	-9	-602	-9	602	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTATGTGACCCTCGGAGC	3	True	NA	NA	False	AAGAAA	-42	NA	10353610	10352098	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_10352100_10353600
H1_mix_00072428	chr5	-	407	1	FSM	ENSG00000251548.1	ENST00000504159.1	619	1	228	-16	228	16	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCATCCCCCTCTCAGGC	NA	False	NA	NA	False	AATGAA	-9	NA	10664885	10664478	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_10664500_10664900
H1_mix_00072429	chr5	-	4218	21	FSM	ENSG00000169862.20	ENST00000511377.5	4336	21	118	0	-53	0	multi-exon	FALSE	canonical	1	1	junction_20	12.721929885045	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGTGTTTCCTCATCTATG	164	False	NA	NA	False	ATTAAA	-36	NA	11588901	10972894	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_10973714_10981772_10981847_10988110_10988243_10992550_10992678_11017973_11018059_11022768_11022980_11082695_11082847_11098574_11098749_11110857_11111044_11117449_11117568_11159575_11159760_11199447_11199662_11236690_11236824_11346371_11346628_11364695_11364891_11384664_11385230_11397030_11397204_11411535_11411653_11412034_11412070_11564943_11565057_11588745
H1_mix_00072430	chr5	-	2982	19	FSM	ENSG00000169862.20	ENST00000503622.5	2982	19	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_15	15.7367424115792	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGGCTGTGATAACCAGT	-23	True	NA	NA	False	NA	NA	NA	11588848	10973339	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_10973714_10981772_10981847_10988110_10988243_10992550_10992678_11017973_11018059_11022768_11022980_11082695_11082847_11098574_11098749_11110857_11111044_11117449_11117568_11159575_11159760_11199447_11199662_11236690_11236824_11346371_11346628_11364695_11364891_11411535_11411653_11412034_11412070_11564943_11565057_11588745
H1_mix_00072431	chr5	-	413	4	FSM	ENSG00000169862.20	ENST00000506324.1	415	4	2	0	2	0	multi-exon	FALSE	canonical	1	1	junction_2	22.3954360429878	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCGAGTACACCATGCAC	NA	False	NA	NA	False	NA	NA	NA	11018058	10973586	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_10973714_10981772_10981847_10992550_10992678_11017973
H1_mix_00072432	chr5	-	252	1	FSM	ENSG00000250526.1	ENST00000507234.1	1593	1	1356	-15	1356	15	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTATCTGAATCTTGAAG	NA	False	NA	NA	False	NA	NA	NA	14639662	14639410	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_14639400_14639700
H1_mix_00072433	chr5	-	1814	1	FSM	ENSG00000249485.1	ENST00000502424.1	1276	1	1	-539	1	539	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTCCTCTTTCCCCATAT	33	False	NA	NA	False	AAAACA	-3	NA	14798399	14796585	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_14796600_14798400
H1_mix_00072434	chr5	-	6119	24	NNC	ENSG00000145555.15	novel	4839	23	NA	NA	-164	38339	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	141.610531151752	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTGACTTTATTTGTAA	6205	False	NA	NA	False	NA	NA	NA	16738578	16623567	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_16623609_16665304_16666794_16668276_16668469_16670525_16670979_16671421_16671543_16672688_16672826_16673681_16673890_16674852_16675151_16676030_16676155_16679946_16680105_16681308_16681504_16681870_16682014_16683879_16683936_16685737_16685832_16689823_16689920_16694370_16694615_16699449_16699574_16700962_16701839_16702542_16702589_16702924_16703159_16704578_16704686_16710907_16711023_16711120_16711246_16738135
H1_mix_00072435	chr5	-	6113	24	NNC	ENSG00000145555.15	novel	4839	23	NA	NA	-164	38339	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	141.610531151752	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTGACTTTATTTGTAA	6205	False	NA	NA	False	NA	NA	NA	16738578	16623567	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_16623598_16665299_16666794_16668276_16668469_16670525_16670979_16671421_16671543_16672688_16672826_16673681_16673890_16674852_16675151_16676030_16676155_16679946_16680105_16681308_16681504_16681870_16682014_16683879_16683936_16685737_16685832_16689823_16689920_16694370_16694615_16699449_16699574_16700962_16701839_16702542_16702589_16702924_16703159_16704578_16704686_16710907_16711023_16711120_16711246_16738135
H1_mix_00072436	chr5	-	9234	42	NNC	ENSG00000145555.15	novel	11442	41	NA	NA	0	-231	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	183.83677743492	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTAATAGGGGACAAAACAA	11	True	NA	NA	False	NA	NA	NA	16936259	16662144	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_16663361_16665301_16666794_16668276_16668469_16670525_16670979_16671421_16671543_16672688_16672826_16673681_16673890_16674852_16675151_16676030_16676155_16679946_16680105_16681308_16681504_16681870_16682014_16683879_16683936_16685737_16685832_16689823_16689920_16694370_16694615_16699449_16699574_16700962_16701839_16702542_16702589_16702924_16703159_16704578_16704686_16710907_16711023_16711120_16711246_16754827_16754909_16758117_16758227_16761463_16761547_16762044_16762114_16762544_16762638_16763480_16763548_16763654_16763756_16764249_16764397_16766079_16766199_16769073_16769204_16779544_16779649_16780523_16780609_16780727_16780742_16781704_16781830_16783334_16783470_16794645_16794834_16818008_16818168_16877608_16877708_16935787
H1_mix_00072440	chr5	-	212	1	FSM	ENSG00000243538.1	ENST00000470806.1	348	1	-6	142	-6	-142	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTACATTACTGTCTGA	17	False	NA	NA	False	NA	NA	NA	16902647	16902435	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_16902400_16902600
H1_mix_00072441	chr5	-	3910	4	Intergenic	novelGene_1143	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	5	junction_1	144.804082201512	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGTAGTTCTT	35	False	NA	NA	False	ATTAAA	-21	NA	18674220	18549658	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_-_18551166_18658426_18658540_18664323_18664435_18672041
H1_mix_00072442	chr5	-	5141	3	Intergenic	novelGene_1148	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	70	junction_2	129.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAACTGGGCATAACTCA	166	False	NA	NA	False	NA	NA	NA	18674089	18653594	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_-_18658540_18664323_18664435_18674004
H1_mix_00072443	chr5	-	2804	5	Intergenic	novelGene_1151	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_2	10.0623058987491	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACACCCACACACACATCT	35	False	NA	-80	True	NA	NA	NA	18674220	18653847	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_-_18654064_18658426_18658540_18662210_18662396_18664323_18664435_18672041
H1_mix_00072445	chr5	-	842	1	FSM	ENSG00000214132.4	ENST00000502634.1	1404	1	400	162	400	-162	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGTACGCCAACAGGGAAAAA	8816	False	NA	NA	False	NA	NA	NA	20305048	20304206	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_20304200_20305000
H1_mix_00072446	chr5	-	584	3	FSM	ENSG00000248605.5	ENST00000511029.5	565	3	0	-19	0	19	multi-exon	FALSE	canonical	2	8	junction_1	59.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAGGGGTTATATTCATT	NA	False	NA	-98	True	NA	NA	NA	25422855	25404713	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_25405094_25413766_25413845_25422729
H1_mix_00072447	chr5	-	4020	3	NNC	ENSG00000248605.5	novel	638	3	NA	NA	0	3262	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	11.5	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTAAATCATAGTGATTTT	NA	False	NA	NA	False	TATAAA	-3	NA	25422855	25410176	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_25413845_25415574_25415801_25422729
H1_mix_00072448	chr5	-	1196	2	NIC	ENSG00000248605.5	novel	638	3	NA	NA	0	702	combination_of_known_splicesites	FALSE	canonical	3	63	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGAGCAGTCTGAGCT	NA	False	NA	2	True	AATAAA	-29	NA	25445907	25412736	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_25413845_25445819
H1_mix_00072449	chr5	-	12357	1	FSM	ENSG00000279531.1	ENST00000623500.1	188	1	-9835	-2334	-9835	2334	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTTTGGTTAAAAGATAA	9197	False	NA	NA	False	AATAAA	-34	NA	25435434	25423077	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_25423100_25435400
H1_mix_00072453	chr5	-	4611	35	NNC	ENSG00000113360.17	novel	4681	35	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_34	87.494127336291	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTATGTGGAATAGATCCT	22	True	NA	NA	False	AATAAA	-15	NA	31532061	31401151	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_31401563_31405676_31405724_31406852_31406946_31409055_31409160_31409249_31409333_31410745_31410888_31421271_31421378_31422786_31422945_31424426_31424472_31429474_31429546_31431575_31431679_31435764_31435865_31437238_31437299_31448546_31448608_31449280_31449420_31451532_31451641_31464235_31464344_31466181_31466282_31467938_31468064_31472062_31472233_31483553_31483629_31484880_31484963_31486490_31486563_31493206_31493294_31495285_31495373_31504554_31504636_31508620_31508776_31511034_31511177_31514987_31515220_31521122_31521216_31526078_31526913_31529039_31529106_31530797_31530925_31531449_31531522_31531989
H1_mix_00072454	chr5	-	5479	35	NNC	ENSG00000113360.17	novel	5416	36	NA	NA	0	198	at_least_one_novel_splicesite	FALSE	canonical	3	99	junction_29	81.8385193695191	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCAATGAGGTGTTTGA	-10	True	NA	NA	False	AATAAA	-20	NA	31532093	31400295	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_31401563_31405676_31405724_31406852_31406946_31409055_31409160_31409249_31409333_31410745_31410888_31421271_31421378_31422786_31422945_31424426_31424472_31429474_31429546_31431575_31431679_31435764_31435865_31437238_31437299_31448546_31448608_31449280_31449420_31451532_31451641_31464235_31464344_31466181_31466282_31467962_31468064_31472062_31472233_31483553_31483629_31484880_31484963_31486490_31486563_31493206_31493294_31495285_31495373_31504554_31504636_31508620_31508776_31511034_31511177_31514987_31515220_31521122_31521216_31526078_31526913_31529039_31529106_31530797_31530925_31531449_31531526_31531989
H1_mix_00072455	chr5	-	4446	33	NIC	ENSG00000113360.17	novel	5305	35	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	3	19	junction_29	80.534051173634	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTATGTGGAATAGATCCT	22	True	NA	NA	False	AATAAA	-15	NA	31532061	31401151	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_31401563_31405676_31405724_31406852_31406946_31409055_31409160_31409249_31409333_31410745_31410888_31421271_31421378_31422786_31422945_31424426_31424472_31429474_31429546_31431575_31431679_31435764_31435865_31437238_31437299_31448546_31448608_31449280_31449420_31451532_31451641_31464235_31464344_31466181_31466282_31467938_31468064_31472062_31472233_31483553_31483629_31484880_31484963_31486490_31486563_31493206_31493294_31495285_31495373_31504554_31504636_31508620_31508776_31511034_31511177_31514987_31515220_31526078_31526913_31529039_31529106_31530797_31530925_31531989
H1_mix_00072459	chr5	-	1074	4	FSM	ENSG00000113384.14	ENST00000503610.5	1074	4	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_3	386.207485973825	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGAGAATGCTTTTGCT	5	True	NA	NA	False	NA	NA	NA	32174302	32126366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_32126637_32135571_32135687_32143748_32143881_32173745
H1_mix_00072460	chr5	-	665	3	FSM	ENSG00000113384.14	ENST00000512668.1	665	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	459.5	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTACGGGAACGATTAGCT	-10	True	NA	NA	False	ATTAAA	-21	NA	32174317	32126594	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_32126637_32135571_32135687_32173809
H1_mix_00072461	chr5	-	5118	17	NNC	ENSG00000150712.11	novel	5116	16	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	84.58536276301	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTACTTGGTGTGGTTG	-25	True	NA	-33	True	ATTAAA	-18	NA	32312969	32227006	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_32228570_32228597_32230348_32233772_32233935_32234961_32235130_32239000_32239174_32242056_32242128_32243520_32243600_32248001_32248127_32248771_32248879_32255692_32255769_32263112_32263243_32268700_32268795_32270816_32270948_32271832_32271906_32273979_32274123_32276681_32276743_32312757
H1_mix_00072463	chr5	-	5322	18	ISM	ENSG00000056097.16	ENST00000265069.13	4717	20	23228	585	22984	-83	3prime_fragment	FALSE	canonical	1	196	junction_12	115.88065092808	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGACATAGCAAGGCCAA	8566	False	NA	NA	False	TTTAAA	-45	NA	32421512	32354934	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_32355940_32363947_32364046_32364163_32364276_32379114_32379211_32380074_32380173_32385507_32385650_32387548_32387700_32388468_32388675_32390274_32390438_32395158_32395305_32397218_32397339_32400006_32400204_32403105_32403398_32403905_32404098_32406773_32407022_32414968_32415188_32417647_32417793_32419820
H1_mix_00072464	chr5	-	1508	1	FSM	ENSG00000249572.2	ENST00000688369.1	1325	1	-187	4	-187	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTAATGTTCCTCATGT	4562	False	NA	-6	True	AGTAAA	-14	NA	33440832	33439324	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_33439300_33440800
H1_mix_00072466	chr5	-	1401	3	FSM	ENSG00000082196.21	ENST00000513471.5	1393	3	0	-8	0	0	multi-exon	FALSE	canonical	3	14	junction_1	1	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCTAAACTTGTGTTTA	4382	False	NA	-1	True	AATAAA	-19	NA	34029008	34019696	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_34020743_34023908_34024009_34028753
H1_mix_00072467	chr5	-	4499	6	NNC	ENSG00000215158.9	novel	5001	6	NA	NA	6557	2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	13.8188277360998	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTTAGTCTGTCTCTTC	NA	False	NA	NA	False	AATAAA	-16	NA	34182957	34164695	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_34168476_34169026_34169154_34175444_34175538_34175821_34175958_34179012_34179098_34182679
H1_mix_00072468	chr5	-	470	1	FSM	ENSG00000271874.1	ENST00000606491.1	432	1	-101	63	-101	-63	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAGCACTTAGGACCCAA	NA	False	NA	-61	True	NA	NA	NA	34651989	34651519	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_34651500_34652000
H1_mix_00072469	chr5	-	6338	7	FSM	ENSG00000113456.19	ENST00000513914.5	1328	7	-1458	-3552	-304	157	multi-exon	FALSE	canonical	3	14	junction_4	142.057206786562	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGTGTTCTAAACAGAAAC	1065	False	NA	NA	False	NA	NA	NA	34917073	34905102	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_34908949_34909257_34909357_34911553_34911813_34913469_34913579_34913926_34914027_34914694_34914962_34915415
H1_mix_00072471	chr5	-	1924	6	FSM	ENSG00000168671.10	ENST00000513300.5	1924	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	77.0158425260673	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCCTCCATGTCCAGACC	13	True	NA	-97	True	NA	NA	NA	36066882	36035336	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_36035975_36037796_36038017_36039476_36039709_36048888_36049421_36051869_36051985_36066695
H1_mix_00072473	chr5	-	1470	13	NIC	ENSG00000152620.13	novel	1437	13	NA	NA	45	-7	combination_of_known_junctions	FALSE	canonical	3	26	junction_6	42.8521359509133	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTGAAGGATTTCCTCAT	290	False	NA	NA	False	AATAAA	-30	NA	36241880	36195150	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_36195283_36197540_36197665_36200226_36200281_36201105_36201162_36207169_36207266_36208624_36208691_36211843_36211923_36217747_36217885_36219595_36219680_36225541_36225624_36226474_36226564_36227476_36227566_36241498
H1_mix_00072474	chr5	-	7416	37	FSM	ENSG00000197603.16	ENST00000514429.5	7416	37	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_12	5.47912705942592	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGGAATATGACTCCGGC	1	False	NA	NA	False	AAGAAA	-28	NA	37213622	37106977	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_37107779_37108292_37108472_37114959_37115050_37120215_37120341_37121616_37121785_37122429_37122489_37125243_37125410_37138719_37138849_37139339_37139371_37142309_37142481_37148180_37148269_37153739_37153994_37157669_37157869_37158223_37158346_37162464_37162567_37164272_37164328_37165538_37165672_37167046_37167214_37168790_37169562_37170040_37170332_37173754_37173948_37175908_37175987_37177620_37177701_37179360_37179444_37180016_37180184_37180856_37181006_37182759_37183700_37184787_37185080_37186285_37186395_37187413_37187573_37187732_37187843_37195857_37195997_37198701_37198867_37201590_37201809_37205314_37205455_37206196_37206426_37213558
H1_mix_00072475	chr5	-	537	1	FSM	ENSG00000270558.1	ENST00000603896.1	529	1	0	-8	0	8	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCATTTTGAAAGTAGTT	1763	False	NA	-16	True	AATAAA	-15	NA	37286977	37286440	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_37286400_37287000
H1_mix_00072479	chr5	-	3442	3	Antisense	novelGene_ENSG00000164318.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	9	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTGGTCACTGCAATATT	NA	False	NA	-9	True	AATAAA	-15	NA	38341354	38295302	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr5_-_38298509_38316870_38317024_38341271
H1_mix_00072480	chr5	-	1433	3	Antisense	novelGene_ENSG00000164318.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	7.5	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTGGTCACTGCAATATT	NA	False	NA	-9	True	AATAAA	-15	NA	38341354	38295302	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr5_-_38296500_38316870_38317024_38341271
H1_mix_00072481	chr5	-	4995	4	Antisense	novelGene_ENSG00000164318.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_3	2.16024689946929	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATCATGAGATAAAAAAATC	NA	False	NA	39	True	NA	NA	NA	38341345	38313202	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr5_-_38317964_38325773_38325817_38336287_38336405_38341271
H1_mix_00072482	chr5	-	3774	2	Antisense	novelGene_ENSG00000164318.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	0	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCCATCCCTTTATTTTG	NA	False	NA	NA	False	NA	NA	NA	38341358	38332720	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr5_-_38336408_38341271
H1_mix_00072483	chr5	-	784	4	FSM	ENSG00000113638.14	ENST00000511730.2	784	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	56.0971379741328	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGTATGCATAGGATTAT	-19	True	NA	NA	False	NA	NA	NA	40755949	40716144	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_40716499_40730261_40730344_40746797_40747020_40755823
H1_mix_00072485	chr5	-	272	1	FSM	ENSG00000248120.1	ENST00000504890.1	259	1	0	-13	0	13	mono-exon	FALSE	NA	NA	NA	NA	NA	217	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAAGATCACTCCATTGC	NA	False	NA	NA	False	NA	NA	NA	40967763	40967491	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_40967500_40967800
H1_mix_00072486	chr5	-	5797	1	ISM	ENSG00000182836.10	ENST00000377801.8	7706	3	197853	0	197853	0	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTATTTTTTATTTTAAT	NA	False	NA	-17	True	AATAAA	-17	NA	41312748	41306951	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_41307000_41312700
H1_mix_00072487	chr5	-	7706	3	FSM	ENSG00000182836.10	ENST00000377801.8	7706	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTATTTTTTATTTTAAT	-19	True	NA	-17	True	AATAAA	-17	NA	41510601	41306951	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_41313771_41381825_41382535_41510423
H1_mix_00072488	chr5	-	714	4	FSM	ENSG00000250722.6	ENST00000513303.5	714	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	270.072006859076	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGGTCACCCAGAGAACC	-2	True	NA	NA	False	NA	NA	NA	42811893	42801104	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_42801332_42806895_42807109_42808150_42808367_42811835
H1_mix_00072490	chr5	-	3105	5	NNC	ENSG00000151881.15	novel	2950	5	NA	NA	0	-129	intron_retention	FALSE	canonical	2	5	junction_3	29.2435890410189	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTTGAACCTGGGAGGCA	-30	True	NA	NA	False	NA	NA	NA	43483893	43444380	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_43446558_43453657_43454044_43476113_43476486_43479889_43479988_43483821
H1_mix_00072491	chr5	-	2201	12	NIC	ENSG00000172244.9	novel	2502	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_11	21.8809702596602	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACGTTTCACATTTAATTC	19	True	NA	-9	True	AATAAA	-15	NA	43515078	43486708	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_43487112_43487908_43487950_43490630_43490730_43492214_43492310_43492719_43492891_43493542_43493613_43494509_43494602_43502371_43502496_43503664_43503761_43505747_43506395_43508576_43508667_43514805
H1_mix_00072496	chr5	-	734	3	FSM	ENSG00000251141.6	ENST00000503452.5	738	3	4	0	4	0	multi-exon	FALSE	canonical	1	2	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAAGAATGAAAAGAATGA	-15	True	NA	NA	False	AAGAAA	-28	NA	44808773	44744899	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_44745405_44745941_44746039_44808641
H1_mix_00072497	chr5	-	468	3	FSM	ENSG00000251141.6	ENST00000505302.1	468	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	4.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCATTTACTACATACCA	17	True	NA	NA	False	NA	NA	NA	44808741	44745137	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_44745409_44745941_44746039_44808641
H1_mix_00072499	chr5	-	1617	9	FSM	ENSG00000170571.12	ENST00000508934.5	1617	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	82.4059122575559	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAACTGTGCTTGCTCTA	1994	False	NA	-40	True	AATATA	-36	NA	50441350	50398676	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_50399291_50399858_50399914_50402285_50402320_50403177_50403455_50405724_50405853_50410876_50410966_50411196_50411222_50428143_50428228_50441039
H1_mix_00072500	chr5	-	254	1	FSM	ENSG00000271752.1	ENST00000607844.1	408	1	1	153	1	-153	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGTTGAGATGACAGAGG	4746	False	NA	NA	False	NA	NA	NA	50663265	50663011	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_50663000_50663300
H1_mix_00072501	chr5	-	1396	8	NNC	ENSG00000164172.20	novel	3705	7	NA	NA	-28	90776	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	86.2715220116353	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAACAAAGCAACTAA	NA	False	NA	NA	False	NA	NA	NA	53109805	53004902	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_53004935_53098067_53098668_53100410_53100535_53101358_53101510_53102096_53102225_53107076_53107222_53108521_53108644_53109711
H1_mix_00072503	chr5	-	805	1	FSM	ENSG00000272416.1	ENST00000606482.1	759	1	-50	4	-50	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATAGTGAAGTTTTTGCCT	4971	False	NA	-5	True	AATAAA	-14	NA	53881101	53880296	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_53880300_53881100
H1_mix_00072504	chr5	-	628	4	FSM	ENSG00000185305.12	ENST00000505630.5	628	4	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_2	4.32049379893857	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGCATGTAATTAGGA	7	True	NA	NA	False	NA	NA	NA	54310576	54113132	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_54113411_54154579_54154640_54171783_54171929_54310431
H1_mix_00072506	chr5	-	1372	5	NIC	ENSG00000067113.17	novel	1542	6	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	284	junction_4	181.838527270763	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACACTTGCAGGCATTTG	138	False	NA	-11	True	ATTAAA	-19	NA	55534946	55424853	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_55425335_55425862_55426040_55441850_55441909_55467868_55468150_55534571
H1_mix_00072507	chr5	-	2152	14	NIC	ENSG00000177058.12	novel	2522	16	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	80.0629190444438	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTCCTCTTTTATTTCTA	51	False	NA	-3	True	AATAAA	-26	NA	55712272	55625847	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_55626660_55627890_55627981_55633753_55633903_55635543_55635658_55645788_55645896_55649206_55649315_55652528_55652724_55656714_55656775_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55711451_55711500_55712216
H1_mix_00072508	chr5	-	2760	18	NIC	ENSG00000177058.12	novel	2522	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_15	66.1971470966614	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTCCTCTTTTATTTCTA	-4	True	NA	-3	True	AATAAA	-26	NA	55712293	55625847	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_55626660_55627890_55627981_55633753_55633903_55635543_55635658_55645788_55645896_55649206_55649315_55652528_55652724_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55702738_55702895_55704321_55704435_55711451_55711500_55712216
H1_mix_00072509	chr5	-	2429	16	NIC	ENSG00000177058.12	novel	2522	16	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	51	junction_6	60.7447848698873	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTCCTCTTTTATTTCTA	10	True	NA	-3	True	AATAAA	-26	NA	55712313	55625847	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_55626660_55627890_55627981_55633753_55633903_55635543_55635658_55645788_55645896_55649206_55649315_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55704321_55704435_55711451_55711500_55712216
H1_mix_00072510	chr5	-	731	8	FSM	ENSG00000177058.12	ENST00000512208.5	731	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	83.0411749356539	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGTAAGTAGTTTGGG	-4	True	NA	NA	False	NA	NA	NA	55712261	55656720	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55711451_55711500_55712216
H1_mix_00072511	chr5	-	2797	15	NNC	ENSG00000145632.15	novel	2786	14	NA	NA	0	75777	intron_retention	FALSE	non_canonical	0	0	junction_1	20.9947758322135	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGTAGATATAATA	-2	True	NA	NA	False	NA	NA	NA	58460086	58378204	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_58378220_58453985_58454775_58454910_58455022_58455284_58455415_58455538_58455780_58456025_58456156_58456491_58456590_58456944_58457093_58457180_58457380_58457487_58457584_58458083_58458172_58458398_58458529_58458724_58458842_58458984_58459093_58459689
H1_mix_00072514	chr5	-	576	4	FSM	ENSG00000248475.5	ENST00000509476.1	641	4	0	65	0	-65	multi-exon	FALSE	canonical	2	4	junction_2	1.88561808316413	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTACTATTCATAGATAAAT	NA	False	NA	-75	True	NA	NA	NA	58817099	58741645	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_58742001_58814659_58814746_58815733_58815813_58817043
H1_mix_00072516	chr5	-	3874	9	FSM	ENSG00000164181.14	ENST00000508821.6	3874	9	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_8	5.68853012649138	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTGTGTATATTTTTCAT	7	True	NA	-1	True	AATAAA	-19	NA	60844269	60751790	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_60754834_60757508_60757646_60764226_60764333_60766573_60766631_60767822_60767904_60771902_60772094_60787333_60787432_60799179_60799231_60844159
H1_mix_00072519	chr5	-	874	6	NIC	ENSG00000049167.16	novel	881	6	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	59.0437126203968	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTGTACTTGTCTCAT	14	True	NA	0	True	ATTAAA	-18	NA	60945040	60903359	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_60903717_60904787_60904874_60918264_60918389_60922053_60922156_60928863_60928960_60944931
H1_mix_00072522	chr5	-	1581	12	FSM	ENSG00000086189.11	ENST00000681192.1	1581	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_11	128.052739651409	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTATTTTGGTTCTC	-8	True	NA	-18	True	AGTAAA	-17	NA	62403902	62388526	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_62389053_62390875_62390983_62392170_62392235_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62402035_62402123_62403272_62403347_62403667
H1_mix_00072523	chr5	-	1656	13	FSM	ENSG00000086189.11	ENST00000680960.1	1656	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	171.470600006726	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTATTTTGGTTCTC	-11	True	NA	-18	True	AGTAAA	-17	NA	62403905	62388526	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_62389053_62390875_62390983_62392170_62392235_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62399780_62399879_62402035_62402123_62403272_62403347_62403693
H1_mix_00072526	chr5	-	708	2	Genic_Genomic	ENSG00000268942.2	novel	237	1	NA	NA	29	41429	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGATGGCTATCTACAGAC	NA	False	NA	NA	False	NA	NA	NA	62512453	62470816	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr5_-_62470846_62511774
H1_mix_00072529	chr5	-	1629	11	FSM	ENSG00000123219.13	ENST00000508421.5	1586	11	-43	0	0	0	multi-exon	FALSE	canonical	3	51	junction_9	123.564112913095	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTAATCCTCTGTGAAT	-22	True	NA	-55	True	NA	NA	NA	65563168	65517819	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_65518634_65521474_65521529_65528451_65528579_65528918_65529018_65529116_65529200_65542801_65542849_65551563_65551637_65552492_65552550_65554796_65554899_65561462_65561565_65563097
H1_mix_00072530	chr5	-	658	8	FSM	ENSG00000123219.13	ENST00000506282.6	658	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	211.359544716715	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTGCTGCTGCGTAATG	-22	True	NA	NA	False	NA	NA	NA	65563168	65518556	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_65518634_65521474_65521529_65528451_65528579_65528918_65529050_65529116_65529200_65542801_65542849_65561496_65561565_65563097
H1_mix_00072535	chr5	-	793	5	FSM	ENSG00000113595.15	ENST00000505205.1	793	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	38.5064929589803	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTGTCAAACTAGCCCAC	NA	False	NA	NA	False	NA	NA	NA	65624360	65611669	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_65611882_65613726_65613856_65614097_65614220_65618092_65618256_65624193
H1_mix_00072536	chr5	-	553	1	FSM	ENSG00000269961.1	ENST00000602982.1	507	1	-133	87	-133	-87	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAAGTCCCTGGTTCAGT	1250	False	NA	NA	False	NA	NA	NA	65925268	65924715	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_65924700_65925300
H1_mix_00072537	chr5	-	775	2	FSM	ENSG00000229666.2	ENST00000451496.2	904	2	127	2	127	-2	multi-exon	FALSE	canonical	3	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGAGGAACCAGAATGAAT	7369	False	NA	NA	False	AATAAA	-14	NA	67003953	67001384	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_67002050_67003843
H1_mix_00072538	chr5	-	571	1	FSM	ENSG00000250669.1	ENST00000515142.1	405	1	379	-545	379	545	mono-exon	FALSE	NA	NA	NA	NA	NA	520	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTTCTTTTCCAAGATC	9581	False	NA	2	True	AATAAA	-19	NA	67690058	67689487	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_67689500_67690100
H1_mix_00072539	chr5	-	504	1	FSM	ENSG00000249721.1	ENST00000514578.1	389	1	-137	22	-137	-22	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATGAACAAAAAAAGGCTT	6302	False	NA	NA	False	NA	NA	NA	67693337	67692833	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_67692800_67693300
H1_mix_00072540	chr5	-	257	1	FSM	ENSG00000213864.3	ENST00000519625.1	676	1	433	-14	433	14	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGGCATTTAAATAAAAGC	NA	False	NA	NA	False	NA	NA	NA	68159460	68159203	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_68159200_68159500
H1_mix_00072543	chr5	-	1943	8	NNC	ENSG00000253203.6	novel	1296	4	NA	NA	-31537	15274	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	41.8490972277242	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAAATGGTTTAATTGCT	97	False	NA	NA	False	AATAAA	-19	NA	69710796	69624184	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_69624355_69625218_69625901_69640191_69640367_69642204_69642290_69645881_69646070_69679144_69679301_69680765_69680800_69710343
H1_mix_00072544	chr5	-	584	4	FSM	ENSG00000254701.3	ENST00000508650.2	584	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	39.5052739095259	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGGCAGTTTAGCGCA	NA	False	NA	NA	False	NA	NA	NA	70207745	70197254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_70197391_70201867_70202043_70203880_70203966_70207557
H1_mix_00072546	chr5	-	860	2	NNC	ENSG00000253333.1	novel	371	3	NA	NA	5710	14251	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_1	0	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAGCAATGTACATAA	NA	False	NA	NA	False	AATAAA	-38	NA	70495193	70480848	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_70481539_70495023
H1_mix_00072547	chr5	-	1146	8	Fusion	ENSG00000196302.5_ENSG00000253333.1	novel	418	4	NA	NA	-30610	-1959	multi-exon	FALSE	canonical	3	27	junction_1	14.4165437846204	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCTACGCAGCAGACAAGG	276	False	NA	NA	False	NA	NA	NA	70585876	70497058	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr5_-_70497122_70500716_70500904_70516307_70516483_70518320_70518406_70522000_70522189_70555217_70555374_70556839_70556874_70585618
H1_mix_00072548	chr5	-	1716	17	NNC	ENSG00000145736.14	novel	2077	17	NA	NA	0	42849	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	156.689531797756	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCCCTTTGCTTTACTCC	43	False	NA	NA	False	NA	NA	NA	71067638	70989820	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_70989847_71035352_71035797_71037506_71037547_71041521_71041625_71042180_71042285_71045443_71045508_71048005_71048114_71048761_71048850_71049067_71049159_71055351_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71067493
H1_mix_00072549	chr5	-	1814	18	NNC	ENSG00000145736.14	novel	2077	17	NA	NA	0	30488	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	162.897467061604	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAGATAATCAACAACTTG	43	False	NA	NA	False	NA	NA	NA	71067638	71002181	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_71002208_71035352_71035797_71037506_71037547_71041521_71041625_71042180_71042285_71045443_71045508_71048005_71048114_71048761_71048850_71049067_71049159_71055351_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71065124_71065223_71067493
H1_mix_00072551	chr5	-	5110	5	FSM	ENSG00000230847.4	ENST00000445744.3	679	5	1	-4432	1	4432	multi-exon	FALSE	canonical	3	114	junction_1	61.0307299645023	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCAGTCTCCTCTCTTCGC	NA	False	NA	NA	False	NA	NA	NA	71093192	71069792	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_71074327_71076310_71076353_71079796_71079969_71082776_71082993_71093046
H1_mix_00072552	chr5	-	2691	3	ISM	ENSG00000251634.2	ENST00000512908.2	2851	9	15681	5636	15681	-5636	internal_fragment	FALSE	canonical	3	17	junction_2	7	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTAATTTTTTTTTGAC	NA	False	NA	NA	False	AATAAA	-3	NA	71113072	71108533	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_71110773_71111630_71111689_71112678
H1_mix_00072553	chr5	-	3455	4	FSM	ENSG00000113048.17	ENST00000515226.5	4435	4	980	0	980	0	multi-exon	FALSE	canonical	1	2	junction_3	331.95013012332	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTAGTGTACTCTTTATC	NA	False	NA	-6	True	AATAAA	-13	NA	72228573	72219528	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_72221149_72223682_72223851_72226056_72226200_72227049
H1_mix_00072554	chr5	-	1369	12	FSM	ENSG00000113048.17	ENST00000513900.5	1369	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	293.425254818479	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAACAGCCTCAGCTTCC	3	True	NA	NA	False	NA	NA	NA	72320231	72220836	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_72221149_72223682_72223851_72226056_72226200_72228265_72228369_72232442_72232559_72234118_72234198_72238013_72238129_72241646_72241689_72295530_72295590_72297631_72297703_72314080_72314159_72320148
H1_mix_00072558	chr5	-	222	2	FSM	ENSG00000249085.1	ENST00000507957.1	493	2	271	0	271	0	multi-exon	FALSE	canonical	1	1	junction_1	0	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACATGGTAAATAGTGAAAA	261	False	NA	NA	False	NA	NA	NA	72816294	72794404	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_72794485_72816152
H1_mix_00072559	chr5	-	1992	9	NIC	ENSG00000164331.10	novel	2161	9	NA	NA	37	-145	combination_of_known_junctions	FALSE	canonical	3	13	junction_7	33.8228380683821	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCATACTACTTTTTTA	25	True	NA	-11	True	AATAAA	-20	NA	73565602	73552334	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_73552853_73553405_73553487_73554321_73554389_73554860_73554987_73555487_73555586_73557574_73557641_73561129_73561289_73562579_73562986_73565131
H1_mix_00072561	chr5	-	1330	2	FSM	ENSG00000164331.10	ENST00000509433.1	573	2	-474	-283	-11	283	multi-exon	FALSE	canonical	3	121	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTACTAAAAATACAAAAAT	-5	True	NA	NA	False	NA	NA	NA	73565678	73562202	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_73562986_73565131
H1_mix_00072562	chr5	-	2856	20	FSM	ENSG00000164347.18	ENST00000345239.6	2856	20	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	68.6274215725008	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGCTGTGGCCTTTTTCC	9	True	NA	-5	True	AATAAA	-16	NA	74767121	74721205	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_74721784_74722378_74722562_74725639_74725756_74725940_74726127_74730259_74730399_74733021_74733099_74736795_74736986_74738317_74738418_74739988_74740138_74741528_74741610_74745677_74745858_74746104_74746166_74747691_74747781_74750578_74750668_74751367_74751494_74758848_74758947_74759368_74759427_74760901_74760987_74763679_74763767_74766937
H1_mix_00072566	chr5	-	3961	16	FSM	ENSG00000113163.19	ENST00000642556.1	3961	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	33.0524162841724	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGGGGGGGTTGGGGAG	-21	True	NA	48	True	NA	NA	NA	75511638	75372330	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_75374192_75381071_75381202_75381948_75382078_75384641_75384713_75385901_75386035_75389591_75389688_75400204_75400298_75402971_75403059_75411010_75411104_75416875_75417034_75419340_75419425_75425360_75425500_75426370_75426479_75459064_75459182_75505981_75506117_75511111
H1_mix_00072570	chr5	-	2116	13	NNC	ENSG00000152359.15	novel	2185	12	NA	NA	0	12224	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	24.0732389456287	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTGGGAGCCAATAGAAAA	-15	True	NA	NA	False	NA	NA	NA	75717425	75661899	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_75661921_75674201_75674579_75677773_75677951_75685206_75685485_75689011_75689166_75690382_75690563_75692395_75692501_75694654_75694832_75702604_75702811_75705703_75705788_75707736_75707876_75712853_75712952_75717305
H1_mix_00072571	chr5	-	1983	12	NNC	ENSG00000152359.15	novel	2185	12	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	23.6622236158456	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACTGGACTTTATTTCT	12	True	NA	NA	False	ATTAAA	-3	NA	75717398	75674202	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_75674579_75677773_75677951_75685206_75685401_75689011_75689166_75690382_75690563_75692395_75692501_75694654_75694832_75702604_75702811_75705703_75705788_75707736_75707876_75712853_75712952_75717305
H1_mix_00072575	chr5	-	680	8	FSM	ENSG00000164253.14	ENST00000507452.5	680	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	120.659412718408	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGTAAGCTCATTGTGT	27	True	NA	NA	False	NA	NA	NA	77492215	77449764	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_77449871_77451290_77451347_77453816_77453929_77459061_77459125_77463094_77463227_77464760_77464810_77489456_77489573_77492169
H1_mix_00072580	chr5	-	977	5	FSM	ENSG00000132842.14	ENST00000517940.1	974	5	0	-3	0	3	multi-exon	FALSE	canonical	3	261	junction_2	11.5623310798472	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGATTTTTTTTTCTGTCT	NA	False	NA	-3	True	ATTAAA	-29	NA	78116187	78088977	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_78089500_78100952_78101026_78110206_78110355_78113751_78113924_78116125
H1_mix_00072581	chr5	-	5123	6	NNC	ENSG00000145685.14	novel	4977	5	NA	NA	0	41561	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	153.176238366138	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAACCACTCACTAGTCT	-6	True	NA	NA	False	NA	NA	NA	78648895	78443653	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_78443678_78485230_78489154_78509783_78510399_78564812_78564872_78632263_78632369_78648498
H1_mix_00072585	chr5	-	413	2	Genic_Genomic	ENSG00000213757.3	novel	787	1	NA	NA	456	2783	multi-exon	FALSE	non_canonical	0	0	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGGCTGGGCACAGTGA	481	False	NA	NA	False	AGTAAA	-29	NA	79284462	79281348	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr5_-_79281380_79284080
H1_mix_00072586	chr5	-	710	3	FSM	ENSG00000152413.15	ENST00000460741.1	755	3	45	0	45	0	multi-exon	FALSE	canonical	3	180	junction_1	12	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGAATATCACTCCTCC	NA	False	NA	NA	False	NA	NA	NA	79397865	79375907	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_79376198_79396822_79396904_79397526
H1_mix_00072587	chr5	-	1441	2	NNC	ENSG00000164300.17	novel	6448	12	NA	NA	26875	31075	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCGCTGCTCTCATGCAG	-1	True	NA	NA	False	AAAAAG	-4	NA	80140305	80080575	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_80080605_80138893
H1_mix_00072588	chr5	-	1440	2	NNC	ENSG00000164300.17	novel	6448	12	NA	NA	26875	31075	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCGCTGCTCTCATGCAG	-1	True	NA	NA	False	AAAAAG	-4	NA	80140305	80080575	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_80080604_80138893
H1_mix_00072590	chr5	-	215	1	FSM	ENSG00000227087.4	ENST00000424312.2	969	1	49	705	49	-705	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACAATTCTGGCCGTTGA	76	False	NA	NA	False	NA	NA	NA	80332492	80332277	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_80332300_80332500
H1_mix_00072592	chr5	-	3508	7	NNC	ENSG00000228716.7	novel	1719	7	NA	NA	0	70571	intron_retention	FALSE	non_canonical	0	0	junction_1	317.780016503381	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGCCATATTTGGAAGAG	1078	False	NA	NA	False	AAAAAG	-13	NA	80654547	80555654	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_80555682_80626227_80629166_80633876_80633993_80637882_80638010_80649388_80649495_80654007_80654058_80654403
H1_mix_00072593	chr5	-	4266	2	ISM	ENSG00000189127.8	ENST00000338682.8	3730	5	5566	2	5536	-2	3prime_fragment	FALSE	canonical	3	29	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGGTTACTGATTTTT	5693	False	NA	-2	True	AATAAA	-13	NA	80564714	80556756	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_80560043_80563734
H1_mix_00072594	chr5	-	2059	5	NNC	ENSG00000189127.8	novel	3730	5	NA	NA	-255	1291	at_least_one_novel_splicesite	TRUE	canonical	3	10	junction_2	7.82623792124926	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCCCACCCTTAAATGTA	NA	False	NA	NA	False	NA	NA	NA	80570535	80558677	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_80560043_80563734_80563816_80566688_80566772_80568959_80569108_80570153
H1_mix_00072595	chr5	-	2029	2	NNC	ENSG00000189127.8	novel	3730	5	NA	NA	2639	-4752	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	0	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	2796	False	NA	NA	False	NA	NA	NA	80567611	80564720	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_80565827_80566688
H1_mix_00072596	chr5	-	930	1	FSM	ENSG00000271043.2	ENST00000604882.2	87	1	-865	22	-865	-22	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTAAGTTCAGTTTTTT	4674	False	NA	NA	False	NA	NA	NA	80650951	80650021	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_80650000_80651000
H1_mix_00072599	chr5	-	327	3	FSM	ENSG00000172497.9	ENST00000506440.1	752	3	1	424	1	-424	multi-exon	FALSE	canonical	1	1	junction_1	0	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAGAAGTGAAATCATATG	NA	False	NA	NA	False	NA	NA	NA	81335901	81330876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_81330941_81332476_81332606_81335767
H1_mix_00072600	chr5	-	4465	17	FSM	ENSG00000145687.17	ENST00000615665.4	4465	17	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	45.9197244520261	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGATTCTTAACTACGT	9648	False	NA	NA	False	AATACA	-23	NA	81751253	81417359	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_81420534_81428584_81428684_81437429_81437459_81440557_81440637_81442652_81442724_81446867_81446923_81448789_81448826_81461054_81461104_81466973_81467066_81473699_81473771_81474495_81474563_81489249_81489310_81513627_81513718_81615472_81615558_81636556_81636619_81650266_81650340_81750980
H1_mix_00072602	chr5	-	1586	15	NIC	ENSG00000145687.17	novel	8841	17	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	1	7	junction_14	48.2650526377259	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCGTCTGATGCAAGTTAT	NA	False	NA	-35	True	AATAAA	-28	NA	81616473	81419931	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_81420534_81428584_81428684_81437429_81437459_81440557_81440637_81442652_81442724_81446867_81446923_81448789_81448826_81461054_81461104_81466973_81467042_81473699_81473771_81474495_81474563_81489249_81489310_81513627_81513718_81615472_81615558_81616348
H1_mix_00072603	chr5	-	1496	14	NIC	ENSG00000145687.17	novel	1790	16	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	66.9149420343141	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCGTCTGATGCAAGTTAT	NA	False	NA	-35	True	AATAAA	-28	NA	81616473	81419931	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_81420534_81428584_81428684_81437429_81437459_81440557_81440637_81442652_81442724_81446867_81446923_81448789_81448826_81461054_81461104_81466973_81467042_81473699_81473771_81474495_81474563_81489249_81489310_81615472_81615558_81616348
H1_mix_00072608	chr5	-	1020	3	Intergenic	novelGene_1170	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACTTACTTTATGAAGC	NA	False	NA	NA	False	NA	NA	NA	83047812	83022850	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_-_83023446_83044562_83044630_83047454
H1_mix_00072610	chr5	-	531	1	FSM	ENSG00000242858.1	ENST00000492855.1	602	1	-10	81	-10	-81	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCTACAGAAACAGGCCGA	4	True	NA	NA	False	AATAAA	-10	NA	83746999	83746468	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_83746500_83747000
H1_mix_00072611	chr5	-	431	1	FSM	ENSG00000242477.1	ENST00000486625.1	651	1	237	-17	237	17	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAGTAAAAAAAAAAAAAGAA	263	False	NA	NA	False	AATAAA	-10	NA	86884644	86884213	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_86884200_86884600
H1_mix_00072613	chr5	-	2474	11	NIC	ENSG00000164180.14	novel	1796	13	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	3	20	junction_10	18.3806963959476	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAAGCAATTTATTTGTG	7	True	NA	-8	True	ATTAAA	-22	NA	88268829	88195202	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_88196489_88197668_88197766_88198975_88199151_88202961_88203076_88205813_88205955_88206438_88206500_88207028_88207181_88220562_88220720_88225768_88225867_88228444_88228529_88268720
H1_mix_00072614	chr5	-	232	1	FSM	ENSG00000081189.16	ENST00000629847.1	421	1	-79	268	-79	-130	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTACTTCAAATTTTACTAA	8183	False	NA	NA	False	NA	NA	NA	88881343	88881111	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_88881100_88881300
H1_mix_00072616	chr5	-	1243	7	NNC	ENSG00000237187.9	novel	1431	9	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.47722557505166	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGTGTTTTAAGTCTC	7	True	NA	-1	True	AATAAA	-19	NA	93570811	93411017	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_93411510_93438702_93438742_93553760_93553864_93554873_93554996_93563363_93563464_93569889_93570003_93570537
H1_mix_00072617	chr5	-	963	6	FSM	ENSG00000113391.19	ENST00000506398.6	965	6	2	0	2	0	multi-exon	FALSE	canonical	3	42	junction_5	10.3227903204512	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTACAAAACGCATCATT	NA	False	NA	NA	False	ATTAAA	-17	NA	94074769	93881310	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_93881689_93958776_93958969_93964457_93964524_94050730_94050832_94053125_94053228_94074645
H1_mix_00072618	chr5	-	1321	10	FSM	ENSG00000198677.12	ENST00000507805.5	1321	10	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_9	21.570441595324	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTTACAATGTTGCAATA	NA	False	NA	NA	False	NA	NA	NA	95522086	95506976	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_95507012_95509593_95509688_95512476_95512619_95513570_95513646_95514854_95514924_95516352_95516410_95516524_95517061_95517145_95517323_95520715_95520819_95522053
H1_mix_00072620	chr5	-	1366	3	FSM	ENSG00000173221.14	ENST00000379979.8	1366	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	125	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGTCCAATTCATTTG	12	True	NA	0	True	AATAAA	-24	NA	95822714	95813970	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_95814958_95816506_95816627_95822455
H1_mix_00072622	chr5	-	468	3	FSM	ENSG00000118985.16	ENST00000508757.1	468	3	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_2	12.5	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCTTGAAAATAAATTAACA	8397	False	NA	NA	False	ACTAAA	-13	NA	95898317	95890948	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_95891275_95895627_95895692_95898239
H1_mix_00072626	chr5	-	755	5	FSM	ENSG00000164307.13	ENST00000507859.1	755	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	3.89711431702997	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTCTTATAATTAACCTC	NA	False	NA	NA	False	NA	NA	NA	96790626	96785638	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_96785972_96786469_96786550_96788530_96788686_96790295_96790368_96790511
H1_mix_00072627	chr5	-	555	3	FSM	ENSG00000164307.13	ENST00000508227.5	555	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	19.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTCAAAGCAAGTTTCTC	3	True	NA	NA	False	NA	NA	NA	96807922	96800933	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_96801001_96803402_96803828_96807859
H1_mix_00072628	chr5	-	603	4	FSM	ENSG00000058729.11	ENST00000511293.1	603	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	152.971311762115	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTTGGTCATTCAGTAT	NA	False	NA	-15	True	AATAAA	-19	NA	97167577	97162935	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_97163226_97165050_97165148_97166266_97166372_97167466
H1_mix_00072630	chr5	-	493	2	FSM	ENSG00000058729.11	ENST00000510384.1	493	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATAGCCAGCCTTAAACA	6	True	NA	NA	False	NA	NA	NA	97183242	97179142	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_97179194_97182800
H1_mix_00072631	chr5	-	1461	1	FSM	ENSG00000250221.1	ENST00000512863.1	1461	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCCTGCCCAAGTGACAGG	NA	False	NA	NA	False	NA	NA	NA	98393530	98392069	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_98392100_98393500
H1_mix_00072636	chr5	-	1794	3	FSM	ENSG00000113532.13	ENST00000451528.2	1794	3	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	1.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATCTTTCCTTTTCTCTCT	57	False	NA	1	True	AATAAA	-21	NA	100903214	100885310	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_100886601_100895653_100895786_100902842
H1_mix_00072637	chr5	-	3324	7	FSM	ENSG00000145723.17	ENST00000512248.5	3325	7	0	1	0	-1	multi-exon	FALSE	canonical	2	6	junction_5	14.2789666604026	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGTTTGTGGGACTTTG	17	True	NA	-1	True	AATAAA	-18	NA	103120108	103086000	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_103088173_103096540_103096827_103097313_103097491_103097589_103097782_103104540_103104847_103108568_103108715_103120063
H1_mix_00072639	chr5	-	3434	7	FSM	ENSG00000112874.10	ENST00000507423.1	1781	7	0	-1653	0	0	multi-exon	FALSE	canonical	3	42	junction_5	25.491283913439	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTGTGTGTGTGTT	1	True	NA	-2	True	ATTAAA	-14	NA	103562789	103548854	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_103550972_103552216_103552417_103554739_103554854_103555930_103556099_103558878_103559469_103560096_103560255_103562702
H1_mix_00072641	chr5	-	3673	3	ISM	ENSG00000251027.2	ENST00000657922.1	620	4	26982	34	-3181	-34	3prime_fragment	FALSE	canonical	0	0	junction_2	4	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTCAGTTTTAATAATGAT	NA	False	NA	-43	True	NA	NA	NA	106984050	106815239	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_106815547_106818398_106818478_106980763
H1_mix_00072642	chr5	-	3573	1	ISM	ENSG00000184349.14	ENST00000333274.11	5372	5	290471	0	8087	0	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGATCCCTCCTTCTACTT	9340	False	NA	-16	True	AATAAA	-25	NA	107380466	107376893	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_107376900_107380500
H1_mix_00072643	chr5	-	2148	6	ISM	ENSG00000145743.18	ENST00000542267.7	5198	9	0	327086	0	-165322	5prime_fragment	FALSE	canonical	2	8	junction_2	3.70944739819828	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGGTAACCATTGTAACAT	-6	True	NA	NA	False	CATAAA	-3	NA	108382098	108186120	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_108186248_108224120_108224229_108348398_108348531_108364737_108364996_108367830_108367954_108380698
H1_mix_00072644	chr5	-	561	3	FSM	ENSG00000145743.18	ENST00000518486.1	561	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	3.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCGGTTGCCTCTCACT	1383	False	NA	NA	False	NA	NA	NA	108380963	108364822	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_108364996_108367830_108367954_108380698
H1_mix_00072645	chr5	-	4645	9	FSM	ENSG00000198961.10	ENST00000361557.4	4645	9	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_6	21.1360917626698	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTAATTGTGTAATTG	NA	False	NA	-9	True	AATAAA	-26	NA	109383433	109334712	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_109337357_109344189_109344312_109344704_109344820_109355914_109356027_109362839_109363023_109368560_109368747_109378203_109379255_109381502_109381704_109383402
H1_mix_00072646	chr5	-	226	1	FSM	ENSG00000202512.1	ENST00000365642.1	335	1	-7	116	-7	-116	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAACGAGCTCTAACTGA	NA	False	NA	NA	False	NA	NA	NA	109699841	109699615	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_109699600_109699800
H1_mix_00072650	chr5	-	888	1	FSM	ENSG00000214784.4	ENST00000461022.1	817	1	-22	-49	-22	49	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATATATATGTGTATA	2	False	NA	NA	False	AATAAA	-21	NA	111193064	111192176	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_111192200_111193100
H1_mix_00072651	chr5	-	5477	4	NIC	ENSG00000164211.13	novel	3500	5	NA	NA	-7	50	intron_retention	FALSE	canonical	3	39	junction_1	111.561642153565	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATGCCTGAATTTAAAGT	474	False	NA	50	True	NA	NA	NA	111512569	111495982	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_111501117_111506329_111506380_111507328_111507443_111512390
H1_mix_00072655	chr5	-	233	1	FSM	ENSG00000253057.1	ENST00000517248.1	293	1	44	16	44	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTTTTTGTTCTTCCAT	9942	False	NA	NA	False	AAAACA	-38	NA	111720017	111719784	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_111719800_111720000
H1_mix_00072663	chr5	-	3034	6	NNC	ENSG00000129625.13	novel	3008	5	NA	NA	0	3113	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	314.64303583585	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAACCTGAGGATCAGACC	29	True	NA	NA	False	AATAAA	-31	NA	112922227	112873271	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_112873298_112876384_112878836_112887014_112887184_112902379_112902519_112921162_112921257_112922072
H1_mix_00072665	chr5	-	4729	17	NIC	ENSG00000171444.18	novel	8257	17	NA	NA	43	1088	combination_of_known_junctions	FALSE	canonical	3	41	junction_16	19.7443623282698	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCTCCCCTTCTCTGAG	-1	True	NA	NA	False	NA	NA	NA	113203274	113025043	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_113027483_113028933_113029057_113043529_113043631_113049092_113049300_113053724_113053960_113063983_113064168_113068079_113068184_113071093_113071235_113082859_113083009_113084100_113084191_113085163_113085311_113101738_113101946_113104191_113104356_113122683_113122827_113143217_113143361_113151308_113151423_113203236
H1_mix_00072667	chr5	-	2138	6	FSM	ENSG00000171444.18	ENST00000506605.6	857	6	-45	-1236	-45	1002	multi-exon	FALSE	canonical	3	41	junction_5	30.261526729496	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCCATGTCCAAAAAAAAAAA	1292	False	NA	NA	False	NA	NA	NA	113203362	113100497	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_113101946_113104191_113104356_113122683_113122827_113143217_113143361_113151308_113151423_113203236
H1_mix_00072670	chr5	-	892	3	ISM	ENSG00000171444.18	ENST00000408903.7	8295	19	-237	318424	133	107593	5prime_fragment	FALSE	canonical	1	3	junction_2	2	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCCAACACAGTGAGTACT	136	False	NA	NA	False	NA	NA	NA	113488690	113340529	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_113340731_113384967_113385213_113488244
H1_mix_00072671	chr5	-	2709	10	NNC	ENSG00000164219.10	novel	9550	9	NA	NA	0	18342	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	98.9242134161298	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	8633	False	NA	NA	False	AATAGA	-42	NA	115262851	115185669	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_115185696_115210852_115212584_115216864_115216974_115221823_115222009_115230975_115231022_115236389_115236523_115237857_115238010_115241538_115241607_115253136_115253256_115262711
H1_mix_00072673	chr5	-	579	2	FSM	ENSG00000164219.10	ENST00000503638.1	579	2	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTCTGTAGCATTAACTC	4	True	NA	NA	False	NA	NA	NA	115262865	115252830	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_115253256_115262711
H1_mix_00072675	chr5	-	1948	6	NNC	ENSG00000129596.5	novel	1565	5	NA	NA	-358	30596	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	68.3098821547805	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAGCTGGGTGGGGTGCA	NA	False	NA	NA	False	NA	NA	NA	115817017	115774136	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_115774162_115804732_115805463_115806348_115806519_115811160_115811316_115813180_115813259_115816227
H1_mix_00072676	chr5	-	752	6	FSM	ENSG00000129596.5	ENST00000502631.1	752	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	72.6322242534262	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGCTACTGCAGAAGAAAAG	1	True	NA	NA	False	NA	NA	NA	115816657	115805263	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_115805463_115806348_115806519_115809621_115809698_115811160_115811316_115813180_115813259_115816583
H1_mix_00072677	chr5	-	5825	3	FSM	ENSG00000145782.13	ENST00000511984.5	567	3	-1896	-3362	-183	48	multi-exon	FALSE	canonical	3	677	junction_1	42	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGATTTTCAGATTTGAA	2153	False	NA	NA	False	AATAAA	-45	NA	115839677	115828151	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_115831864_115832601_115832665_115837627
H1_mix_00072684	chr5	-	4105	5	ISM	ENSG00000113083.15	ENST00000231004.5	5076	7	2717	-42	541	42	3prime_fragment	TRUE	canonical	3	30	junction_2	3.5	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTTAGTTGAAATGTTA	2	True	NA	36	True	AATAAA	-12	NA	122075542	122063152	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_122066750_122070052_122070169_122070493_122070590_122074012_122074170_122075403
H1_mix_00072687	chr5	-	697	1	FSM	ENSG00000263432.2	ENST00000577215.2	297	1	-94	-306	-94	306	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCAAGTACCAGTTTGAC	887	False	NA	NA	False	NA	NA	NA	123022877	123022180	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_123022200_123022900
H1_mix_00072689	chr5	-	4432	16	FSM	ENSG00000168944.17	ENST00000675283.1	4420	16	0	-12	0	7	multi-exon	TRUE	canonical	0	0	junction_13	35.1109985933499	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGAGCAGCCTGTTACTT	NA	False	NA	-5	True	AATAAA	-26	NA	123399582	123344882	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_123346754_123349943_123350090_123364495_123364595_123372649_123372773_123377373_123377536_123378335_123378429_123382110_123382201_123382736_123382890_123382985_123383083_123384950_123385134_123386517_123386668_123388431_123388607_123389923_123390141_123391109_123391338_123393299_123393498_123399135
H1_mix_00072690	chr5	-	5110	20	FSM	ENSG00000168944.17	ENST00000674667.1	5136	20	38	-12	20	7	multi-exon	FALSE	canonical	0	0	junction_13	38.428694265305	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGAGCAGCCTGTTACTT	-4	True	NA	-5	True	AATAAA	-26	NA	123423383	123344882	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_123346754_123349943_123350090_123364495_123364595_123372649_123372773_123377373_123377536_123378335_123378429_123382110_123382201_123382736_123382890_123382985_123383083_123384950_123385134_123386517_123386668_123388303_123388607_123389923_123390141_123391109_123391338_123393299_123393498_123399135_123399285_123412398_123412541_123416009_123416125_123418358_123418516_123422949
H1_mix_00072693	chr5	-	322	3	NNC	ENSG00000253807.6	novel	650	4	NA	NA	182692	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	11	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTGTGATTTTTTTT	NA	False	NA	-4	True	AATAAA	-19	NA	124131987	124059793	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_124059949_124062417_124062511_124131913
H1_mix_00072694	chr5	-	353	3	Intergenic	novelGene_1194	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCCAAGGCAAGTAGTGG	NA	False	NA	NA	False	NA	NA	NA	124629376	124528977	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_-_124529116_124539459_124539513_124629214
H1_mix_00072695	chr5	-	6154	10	FSM	ENSG00000168916.16	ENST00000513986.2	6152	10	0	-2	0	0	multi-exon	FALSE	canonical	3	17	junction_9	34.1123778266431	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTTGTCTGTCTCATGT	11	True	NA	16	True	ATTAAA	-25	NA	124746639	124636912	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_124637907_124639132_124639215_124641251_124641406_124643510_124643684_124644243_124644662_124646678_124649134_124649609_124649698_124701013_124701270_124744083_124745173_124746194
H1_mix_00072696	chr5	-	8185	1	FSM	ENSG00000251456.1	ENST00000507630.1	558	1	-6239	-1388	-6239	1388	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAGAGAGA	7422	False	NA	NA	False	NA	NA	NA	124741414	124733229	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_124733200_124741400
H1_mix_00072697	chr5	-	1757	19	NNC	ENSG00000164904.18	novel	2747	19	NA	NA	0	25757	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	185.397812191601	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAGCCTGGGCAAAATAG	6239	False	NA	NA	False	NA	NA	NA	126595093	126505442	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_126505473_126544752_126545020_126546323_126546400_126549928_126550003_126550195_126550294_126552020_126552138_126554286_126554394_126555930_126556016_126559239_126559335_126561082_126561125_126568258_126568357_126570781_126570860_126575419_126575465_126577078_126577212_126582850_126582975_126583931_126584013_126592663_126592730_126593350_126593405_126595006
H1_mix_00072698	chr5	-	579	3	FSM	ENSG00000164904.18	ENST00000485852.7	579	3	0	0	0	0	multi-exon	FALSE	canonical	3	821	junction_1	51.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGTTAGGTGGATTTTT	NA	False	NA	-50	True	AATAAA	-31	NA	126550164	126544752	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_126545020_126546323_126546400_126549928
H1_mix_00072703	chr5	-	232	1	FSM	ENSG00000213630.3	ENST00000505182.1	232	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTGACCACATCCTGG	NA	False	NA	NA	False	AAGAAA	-42	NA	126663568	126663336	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_126663300_126663600
H1_mix_00072704	chr5	-	1451	1	FSM	ENSG00000250859.1	ENST00000510896.1	1379	1	16	-88	16	88	mono-exon	FALSE	NA	NA	NA	NA	NA	981	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTCTGCATTTGAAGTGT	4843	False	NA	NA	False	AAAAAG	-23	NA	127512826	127511375	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_127511400_127512800
H1_mix_00072705	chr5	-	1606	4	FSM	ENSG00000245937.9	ENST00000501652.5	1601	4	0	-5	0	0	multi-exon	FALSE	canonical	1	1	junction_3	11.5566238822398	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGAGCGTGTGTGTGAAT	1607	False	NA	NA	False	AATAAA	-20	NA	128082974	127965882	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_127966929_128061143_128061245_128081972_128082192_128082734
H1_mix_00072706	chr5	-	1507	3	FSM	ENSG00000245937.9	ENST00000687795.1	1510	3	3	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	1	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGAGCGTGTGTGTGAAT	-3	True	NA	NA	False	AATAAA	-20	NA	128083094	127965882	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_127966929_128061143_128061245_128082734
H1_mix_00072707	chr5	-	786	2	FSM	ENSG00000249421.2	ENST00000502827.1	786	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAGGTAGAGGTGCCTC	355	False	NA	NA	False	NA	NA	NA	129460689	129459558	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_129460080_129460424
H1_mix_00072712	chr5	-	6290	29	FSM	ENSG00000158987.22	ENST00000296859.10	5618	29	0	-672	0	0	multi-exon	FALSE	canonical	3	8	junction_7	13.2666433784365	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAAAGCCATTAACGTGCA	7453	False	NA	NA	False	AATAAA	-36	NA	131635111	131425886	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_131427292_131428901_131429217_131430858_131431350_131433429_131433659_131439580_131439716_131442348_131442538_131446482_131446704_131450022_131450047_131453053_131453178_131455800_131456013_131461704_131462089_131464040_131464282_131472586_131472745_131479512_131479754_131489545_131489655_131492581_131492786_131495552_131495661_131498442_131498608_131504625_131504779_131505363_131505523_131508070_131508208_131510313_131510492_131521389_131521522_131548046_131548191_131561977_131562048_131592382_131592467_131603270_131603328_131604622_131604694_131634961
H1_mix_00072713	chr5	-	485	4	FSM	ENSG00000164398.15	ENST00000419502.5	934	4	449	0	-1	0	multi-exon	FALSE	canonical	3	7	junction_1	1.63299316185545	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCACAAAATCGGCCAGAGG	-9	True	NA	NA	False	NA	NA	NA	131994252	131989425	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_131989509_131990099_131990165_131990852_131990968_131994030
H1_mix_00072717	chr5	-	544	2	FSM	ENSG00000233006.8	ENST00000453876.1	587	2	43	0	43	0	multi-exon	FALSE	canonical	1	2	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAACTGGGTGGAGCCCACC	NA	False	NA	NA	False	AATAAA	-16	NA	132352507	132349432	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_132349958_132352488
H1_mix_00072718	chr5	-	4146	2	FSM	ENSG00000125347.15	ENST00000472045.1	5153	2	1007	0	-26	0	multi-exon	FALSE	canonical	3	13	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGGTGTGGCCTTTTTAG	-8	True	NA	-30	True	AGTAAA	-9	NA	132488025	132483084	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_132487131_132487925
H1_mix_00072719	chr5	-	1817	10	FSM	ENSG00000164402.14	ENST00000378701.5	1817	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	80.3409401654391	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTTGGCATTTCTTTAT	-13	True	NA	-4	True	AATAAA	-15	NA	132777261	132758143	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_132758557_132760801_132760993_132761132_132761266_132761457_132761627_132761799_132761897_132762483_132762646_132763705_132763887_132764223_132764420_132765408_132765530_132777107
H1_mix_00072723	chr5	-	1080	2	FSM	ENSG00000164403.15	ENST00000440118.1	1080	2	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAGGTATGGAAGTCAGG	-18	True	NA	NA	False	NA	NA	NA	132830659	132825168	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_132826183_132830593
H1_mix_00072724	chr5	-	9305	20	NIC	ENSG00000072364.13	novel	9536	21	NA	NA	6	-122	combination_of_known_junctions	FALSE	canonical	1	2	junction_16	7.61067918606022	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACATTTCAATTTGTAAAG	-4	True	NA	-16	True	ATTAAA	-20	NA	132963612	132875516	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_132881187_132883339_132883561_132885075_132885120_132886309_132886404_132887520_132887593_132887845_132887983_132888096_132888161_132889078_132889174_132892163_132892405_132893029_132893119_132896322_132897241_132898229_132898393_132899103_132899142_132899586_132899642_132902441_132902488_132904367_132904405_132932177_132932223_132934146_132934942_132937066_132937194_132963258
H1_mix_00072725	chr5	-	876	3	FSM	ENSG00000155329.12	ENST00000513848.5	876	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	127	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGATTTCTAATGCTTTT	-16	True	NA	-121	True	NA	NA	NA	133026571	132998211	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_132998851_133006758_133006921_133026496
H1_mix_00072728	chr5	-	229	1	FSM	ENSG00000279197.1	ENST00000624830.1	470	1	269	-28	269	28	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCTATGACAATGAGATTCA	NA	False	NA	29	True	AATAAA	-44	NA	133575029	133574800	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_133574800_133575000
H1_mix_00072729	chr5	-	3251	2	ISM	ENSG00000113583.8	ENST00000231512.5	2188	3	7362	0	7362	0	3prime_fragment	FALSE	canonical	3	551	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCACGAGTGTGTTTC	7527	False	NA	-10	True	AATAAA	-20	NA	133961263	133955509	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_133956991_133959493
H1_mix_00072731	chr5	-	1468	2	FSM	ENSG00000113558.19	ENST00000517691.1	2033	2	0	565	0	-98	multi-exon	FALSE	canonical	3	7086	junction_1	0	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTGAATGAATTAACTGA	4682	False	NA	NA	False	AATAGA	-38	NA	134161897	134158038	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_134158596_134160986
H1_mix_00072733	chr5	-	586	3	FSM	ENSG00000006837.12	ENST00000521755.1	586	3	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_1	8	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGAGTGTTTCTTATG	33	False	NA	-3	True	ATTAAA	-17	NA	134371004	134308000	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_134308467_134321790_134321904_134370997
H1_mix_00072735	chr5	-	333	2	Genic_Genomic	ENSG00000273345.5	novel	1744	10	NA	NA	-4	-164678	multi-exon	FALSE	canonical	3	17	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTCCTTTCTGGGTCTG	-11	True	NA	-7	True	ATTAAA	-18	NA	134371048	134370631	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr5_-_134370929_134371012
H1_mix_00072736	chr5	-	1238	4	NNC	ENSG00000237190.4	novel	1228	3	NA	NA	0	21113	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	387.553293826224	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACAAAATACGTGGCTCAC	-4	True	NA	NA	False	NA	NA	NA	134411881	134380951	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_134380985_134402087_134402927_134409902_134410003_134411615
H1_mix_00072738	chr5	-	6548	8	NNC	ENSG00000152700.14	novel	6517	7	NA	NA	0	2614	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	72.5193851634844	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGGCATAGTGGCTCAC	14	False	134632842	NA	False	NA	NA	NA	134632828	134598534	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_134598566_134601148_134607067_134608371_134608504_134609570_134609675_134612690_134612757_134620932_134621053_134623961_134624038_134632727
H1_mix_00072739	chr5	-	2103	4	FSM	ENSG00000152700.14	ENST00000508363.5	3086	4	983	0	-783	0	multi-exon	FALSE	canonical	3	193	junction_2	16.2138486760204	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTTGTTGGGCAAATGTT	NA	False	NA	-13	True	AATAAA	-20	NA	134613920	134606429	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_134607067_134608371_134608504_134609570_134609675_134612690
H1_mix_00072740	chr5	-	1779	8	FSM	ENSG00000113648.17	ENST00000360597.8	1772	8	0	-7	0	0	multi-exon	FALSE	canonical	3	29	junction_3	358.508759463761	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGATTTAGTAAAATGT	7	True	NA	-1	True	NA	NA	NA	135399222	135334409	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_135335142_135343259_135343435_135345967_135346058_135360496_135360608_135369405_135369604_135370035_135370143_135388921_135389127_135399061
H1_mix_00072741	chr5	-	2962	3	FSM	ENSG00000113648.17	ENST00000511494.5	2521	3	-441	0	-441	0	multi-exon	FALSE	canonical	3	708	junction_1	70.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTGCAATTTGGAATT	NA	False	NA	9	True	AATGAA	-39	NA	135348047	135334434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_135335142_135343259_135343435_135345967
H1_mix_00072744	chr5	-	8906	5	FSM	ENSG00000113648.17	ENST00000513210.5	775	5	0	-8131	0	-777	multi-exon	FALSE	canonical	3	132	junction_1	397.399043783449	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCTATCTGTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	135389059	135351590	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_135359943_135360496_135360608_135369405_135369604_135370035_135370143_135388921
H1_mix_00072749	chr5	-	3054	2	Genic_Genomic	ENSG00000177733.7	novel	8713	1	NA	NA	-53	82593	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACGAGTGCTCAAGGATA	NA	False	NA	NA	False	NA	NA	NA	137754416	137663057	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr5_-_137663083_137751387
H1_mix_00072750	chr5	-	2498	6	ISM	ENSG00000031003.11	ENST00000033079.7	5465	23	86508	633	-128	-633	3prime_fragment	FALSE	canonical	2	7	junction_2	4.53431361950185	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCCCTTTTTGTGTGGT	NA	False	NA	NA	False	AATAAA	-14	NA	137946523	137938592	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_137940349_137941943_137942046_137942874_137943039_137943132_137943217_137945901_137945998_137946227
H1_mix_00072753	chr5	-	4371	20	NIC	ENSG00000112983.18	novel	3198	22	NA	NA	1	10	intron_retention	FALSE	canonical	3	236	junction_11	199.865758271996	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTGTGTGTGTGTGT	-3	True	NA	10	True	AATAAA	-29	NA	138178632	138156871	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_138157268_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138166517_138168079_138168469_138168689_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
H1_mix_00072754	chr5	-	3745	23	NNC	ENSG00000112983.18	novel	3198	22	NA	NA	-37	10	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_2	237.471046517011	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTGTGTGTGTGTGT	-28	True	NA	10	True	AATAAA	-29	NA	138178990	138156871	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_138157268_138157641_138157819_138159554_138159600_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138166517_138166728_138167933_138168079_138168469_138168689_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
H1_mix_00072755	chr5	-	4370	21	NIC	ENSG00000112983.18	novel	3198	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	236	junction_12	191.903126602982	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTGTATACAATAAACTGAA	0	True	NA	-33	True	TTTAAA	-25	NA	138178629	138156914	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_138157268_138159554_138159600_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138166517_138168079_138168469_138168689_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
H1_mix_00072756	chr5	-	2876	20	FSM	ENSG00000112983.18	ENST00000512140.5	2876	20	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_18	242.580825836899	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTGTATACAATAAACTGAA	-1	True	NA	-33	True	TTTAAA	-25	NA	138178630	138156914	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138157268_138159554_138159600_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138166517_138166728_138167933_138168079_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138177570_138177668_138178595
H1_mix_00072757	chr5	-	475	3	FSM	ENSG00000112983.18	ENST00000460746.1	475	3	0	0	0	0	multi-exon	FALSE	canonical	3	534	junction_1	144	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCCTTCTCTCTCTCTTT	5578	False	NA	NA	False	NA	NA	NA	138161235	138159574	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138159600_138160068_138160174_138160890
H1_mix_00072765	chr5	-	1030	8	FSM	ENSG00000158402.21	ENST00000503022.5	1059	8	29	0	26	0	multi-exon	FALSE	canonical	3	141	junction_7	37.2317617315197	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGCTCAGGAAGGTAAG	-1	True	NA	NA	False	GATAAA	-28	NA	138331843	138291984	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138292117_138319218_138319375_138325814_138325905_138326020_138326055_138328483_138328530_138329552_138329648_138330986_138331215_138331594
H1_mix_00072767	chr5	-	2363	12	NNC	ENSG00000120705.13	novel	3874	11	NA	NA	0	8567	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	214.359009896871	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGCAAGCACCATTTTG	-6	True	NA	NA	False	NA	NA	NA	138543229	138497527	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_138497562_138507440_138508388_138508668_138508817_138510564_138510630_138511044_138511201_138511474_138511605_138512763_138512955_138513567_138513707_138517560_138517701_138518691_138518868_138542832_138542937_138543096
H1_mix_00072769	chr5	-	3142	16	FSM	ENSG00000113013.16	ENST00000524109.2	3142	16	0	0	0	0	multi-exon	FALSE	canonical	3	2438	junction_4	142.578570931571	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCTAGCCTGTCATTTTT	11	True	NA	-6	True	TATAAA	-17	NA	138575675	138555826	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138556115_138556451_138556593_138556773_138557497_138557868_138557987_138558552_138558658_138559863_138560092_138561579_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574127_138575237
H1_mix_00072770	chr5	-	2120	16	FSM	ENSG00000113013.16	ENST00000507115.6	2120	16	0	0	0	0	multi-exon	FALSE	canonical	3	2438	junction_4	142.965947771566	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTTCTTGATGACTGTC	255	False	NA	NA	False	NA	NA	NA	138575431	138556406	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138556593_138556773_138556867_138557401_138557497_138557868_138557987_138558552_138558658_138559863_138560092_138561579_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574127_138575237
H1_mix_00072771	chr5	-	2272	11	FSM	ENSG00000113013.16	ENST00000508003.2	2272	11	0	0	0	0	multi-exon	FALSE	canonical	3	2499	junction_1	118.330722975903	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTCCTGACTTACCCAA	-28	True	NA	NA	False	NA	NA	NA	138575419	138559102	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138560092_138561579_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574127_138575237
H1_mix_00072773	chr5	-	5529	1	FSM	ENSG00000228672.4	ENST00000434752.4	4513	1	-1016	0	-1016	0	mono-exon	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTGAGGTGCCTGATT	7966	False	NA	0	True	AATAAA	-34	NA	139396120	139390591	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_139390600_139396100
H1_mix_00072775	chr5	-	3919	10	FSM	ENSG00000158458.21	ENST00000361474.6	3919	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_9	4.78423336480244	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGACTGTGTGTGCCTAGC	-19	True	NA	-2	True	AATAAA	-18	NA	140043299	139846780	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_139848698_139851603_139851832_139852431_139852560_139852903_139853028_139855675_139855779_139865548_139865626_139871720_139871842_139880855_139880975_139887339_139887512_140042369
H1_mix_00072778	chr5	-	1924	13	FSM	ENSG00000113108.20	ENST00000467078.5	1920	13	0	-4	0	0	multi-exon	FALSE	canonical	1	1	junction_7	27.5237271377907	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGATGTGAGTATATTGGG	377	False	NA	-1	True	AATAAA	-19	NA	140564245	140558267	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_140558822_140560312_140560505_140560638_140560755_140561017_140561102_140561364_140561450_140561586_140561702_140561843_140561996_140562099_140562228_140562352_140562500_140562662_140562724_140563593_140563671_140563751_140563916_140564196
H1_mix_00072783	chr5	-	721	2	FSM	ENSG00000131495.9	ENST00000502960.1	721	2	0	0	0	0	multi-exon	FALSE	canonical	3	1554	junction_1	0	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTCAGGGTGTTCTTGT	7	False	NA	-11	True	CATAAA	-18	NA	140647771	140645473	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_140645679_140647255
H1_mix_00072786	chr5	-	2333	12	FSM	ENSG00000170445.16	ENST00000675204.1	2327	12	0	-6	0	0	multi-exon	FALSE	canonical	3	427	junction_5	41.6234596915515	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCACGGAGTCTGCGTGT	NA	False	NA	-13	True	AATAAA	-7	NA	140691415	140673914	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_140674826_140675016_140675134_140676653_140676897_140676988_140677117_140677326_140677421_140677654_140677754_140677907_140678016_140679001_140679128_140679787_140679884_140683099_140683220_140690854_140690945_140691214
H1_mix_00072787	chr5	-	5796	28	NNC	ENSG00000131504.18	novel	5843	29	NA	NA	0	51577	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	127.011691673143	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAAGGAAATGAGGATCC	5	True	NA	NA	False	NA	NA	NA	141619055	141463438	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_141463467_141515015_141517009_141524142_141524230_141526037_141526174_141526296_141526461_141527571_141527698_141528452_141528583_141528701_141528942_141529171_141529274_141529602_141529698_141534334_141534434_141571427_141571437_141571925_141572041_141573491_141574209_141574966_141575147_141576229_141576295_141576755_141576872_141577474_141577592_141578224_141578344_141578514_141578626_141579087_141579197_141580743_141580884_141582311_141582376_141583205_141583293_141583484_141583616_141584123_141584226_141587041_141587198_141618797
H1_mix_00072788	chr5	-	5812	29	NNC	ENSG00000131504.18	novel	5843	29	NA	NA	0	15326	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	115.759713305147	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATCTGTTAAAGATGGTG	5	True	NA	NA	False	NA	NA	NA	141619055	141499689	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_141499712_141515020_141517009_141524142_141524230_141526037_141526174_141526296_141526461_141527571_141527698_141528452_141528583_141528701_141528942_141529171_141529274_141529602_141529698_141534334_141534434_141571427_141571437_141571925_141572041_141573491_141574209_141574966_141575147_141576229_141576295_141576755_141576872_141577474_141577592_141578224_141578344_141578514_141578626_141579087_141579197_141580743_141580884_141582311_141582376_141583205_141583293_141583484_141583616_141584123_141584226_141587041_141587198_141588223_141588251_141618797
H1_mix_00072789	chr5	-	574	5	FSM	ENSG00000131504.18	ENST00000494967.5	629	5	55	0	55	0	multi-exon	FALSE	canonical	3	388	junction_3	20.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACACTTCTTGGCTGAGT	NA	False	NA	NA	False	NA	NA	NA	141534433	141528544	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_141528583_141528701_141528942_141529171_141529274_141529602_141529698_141534334
H1_mix_00072790	chr5	-	1952	13	FSM	ENSG00000171720.10	ENST00000469550.6	1952	13	0	0	0	0	multi-exon	FALSE	canonical	3	1191	junction_2	98.5836855445948	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCTTTCTAGGAATGTTAA	1729	False	NA	-18	True	AATAAA	-26	NA	141635164	141620875	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_141621538_141625207_141625366_141625684_141625765_141626012_141626072_141626193_141626284_141627892_141627958_141628113_141628188_141628558_141628640_141629172_141629307_141629683_141629740_141629859_141629917_141630043_141630126_141634810
H1_mix_00072791	chr5	-	774	5	FSM	ENSG00000171720.10	ENST00000491581.5	777	5	0	3	0	-3	multi-exon	FALSE	canonical	3	1191	junction_1	103.846942660822	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTACAGTTTGTGTGGT	8957	False	NA	-6	True	TATAAA	-16	NA	141627936	141624864	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_141625366_141625684_141625765_141626012_141626072_141626193_141626284_141627892
H1_mix_00072794	chr5	-	3182	2	FSM	ENSG00000197948.11	ENST00000520747.1	3181	2	0	-1	0	0	multi-exon	FALSE	canonical	3	98	junction_1	0	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACCATATGTTCTTCCTC	8891	False	NA	-9	True	AATAAA	-19	NA	141642621	141639301	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_141641564_141641701
H1_mix_00072796	chr5	-	496	1	FSM	ENSG00000278925.1	ENST00000623837.1	618	1	178	-56	178	56	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCCACCCGCACAGTTGT	NA	False	NA	57	True	NA	NA	NA	141826147	141825651	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_141825700_141826100
H1_mix_00072797	chr5	-	3851	4	NNC	ENSG00000156453.14	novel	3827	3	NA	NA	0	23026	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	156.74253482135	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGGAGAAACAGAGGCAG	8	True	NA	NA	False	NA	NA	NA	141878410	141830063	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_141830088_141862651_141865428_141868568_141869432_141878222
H1_mix_00072803	chr5	-	500	1	FSM	ENSG00000285366.1	ENST00000644562.1	537	1	25	12	25	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGGTTTTTGGAGAATA	5264	False	NA	NA	False	TTTAAA	-38	NA	142947080	142946580	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_142946600_142947100
H1_mix_00072804	chr5	-	2961	9	FSM	ENSG00000113580.15	ENST00000652686.1	2961	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	6.72681202353685	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGAAGACCACAAAAATTG	4501	False	NA	NA	False	NA	NA	NA	143400852	143281181	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_143282042_143282567_143282726_143295459_143295591_143298667_143298813_143300484_143300593_143300685_143300764_143310096_143310214_143314001_143314169_143399655
H1_mix_00072805	chr5	-	2515	9	FSM	ENSG00000113580.15	ENST00000503201.1	2594	9	79	0	79	0	multi-exon	FALSE	canonical	2	10	junction_8	4.12121038045863	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTTTGTTGTTTTATTT	4	True	NA	NA	False	TATAAA	-19	NA	143404465	143281810	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_143282042_143282567_143282726_143295459_143295591_143298667_143298813_143300484_143300764_143310096_143310214_143314001_143314169_143399655_143400853_143404375
H1_mix_00072806	chr5	-	2255	6	FSM	ENSG00000145817.17	ENST00000448443.6	2255	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_5	115.929978866555	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAACTGTGTTATTGAAT	3	True	NA	-4	True	ATTAAA	-15	NA	144170630	144159272	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_144160560_144162217_144162400_144164110_144164257_144165431_144165605_144169845_144169966_144170283
H1_mix_00072807	chr5	-	603	5	FSM	ENSG00000145817.17	ENST00000522203.5	653	5	50	0	-5	0	multi-exon	FALSE	canonical	1	1	junction_3	125.917383629108	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAATTGGATGTCTAGGAA	22	False	144170686	NA	False	NA	NA	NA	144170664	144162361	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_144162400_144164110_144164257_144165431_144165601_144169845_144169966_144170534
H1_mix_00072808	chr5	-	2144	4	FSM	ENSG00000145817.17	ENST00000508754.1	793	4	-24	-1327	-5	-174	multi-exon	FALSE	canonical	3	277	junction_1	25.2234458831902	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTCTACGTAAAGAATAGA	22	False	144170686	NA	False	TTTAAA	-42	NA	144170664	144162535	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_144164257_144165431_144165605_144169845_144169966_144170534
H1_mix_00072809	chr5	-	2140	8	FSM	ENSG00000186314.12	ENST00000334744.8	2140	8	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_5	21.3264232005888	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5	True	NA	NA	False	NA	NA	NA	145835304	145759018	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_145760526_145764930_145765001_145796441_145796548_145817893_145818055_145819378_145819415_145819944_145820019_145823076_145823135_145835176
H1_mix_00072817	chr5	-	567	5	FSM	ENSG00000156475.19	ENST00000532154.5	567	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	67.2546466796161	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCAATAAAATAAGATGGCT	-21	True	NA	NA	False	AATAGA	-8	NA	146878785	146698039	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_146698145_146701044_146701143_146856498_146856584_146878001_146878196_146878700
H1_mix_00072821	chr5	-	400	4	FSM	ENSG00000164266.11	ENST00000296695.10	413	4	0	13	0	-13	multi-exon	FALSE	canonical	2	5	junction_2	2.82842712474619	604	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGAATATCCCCTGTTG	0	True	NA	NA	False	AATAAA	-3	NA	147831671	147824594	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_147824707_147828021_147828129_147829598_147829631_147831522
H1_mix_00072829	chr5	-	1138	6	FSM	ENSG00000019582.17	ENST00000377795.7	1138	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	172.914545368514	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCTCCTGGCTCTTCT	135	False	NA	-5	True	AATAAA	-18	NA	150412769	150401636	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_150402251_150402562_150402626_150406258_150406322_150406880_150406961_150407151_150407325_150412624
H1_mix_00072831	chr5	-	8802	5	NIC	ENSG00000145908.13	novel	3323	7	NA	NA	0	-1	intron_retention	FALSE	canonical	3	14	junction_2	53.881235138033	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTAATGTCTCTTCACTTC	189	False	NA	-15	True	CATAAA	-27	NA	150904789	150894392	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_150898185_150898427_150903183_150903328_150903384_150903863_150903978_150904703
H1_mix_00072834	chr5	-	520	1	FSM	ENSG00000213433.5	ENST00000518134.1	520	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTGGTCTTGCCCAT	5735	False	NA	-40	True	AATAAA	-13	NA	151766378	151765858	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_151765900_151766400
H1_mix_00072835	chr5	-	3379	14	FSM	ENSG00000055147.19	ENST00000522858.5	3379	14	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_13	20.2467032892479	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATAGCAAAGCA	29	True	NA	58	True	NA	NA	NA	154038866	153991702	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_153993111_153994918_153994973_153997802_153997876_154002250_154002391_154002846_154002970_154011240_154011321_154026398_154026523_154027175_154027335_154028148_154028284_154029488_154029581_154033790_154033884_154034277_154034378_154034743_154034968_154038292
H1_mix_00072836	chr5	-	322	2	FSM	ENSG00000055147.19	ENST00000518735.1	417	2	47	48	47	-48	multi-exon	FALSE	canonical	3	74	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTGTATGCAGTGCAT	NA	False	NA	NA	False	AAAAAG	-40	NA	154027334	154026359	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_154026523_154027175
H1_mix_00072839	chr5	-	3819	8	FSM	ENSG00000170271.11	ENST00000423554.5	3817	8	0	-2	0	0	multi-exon	FALSE	canonical	2	4	junction_2	5.38326962326193	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAGTGGATAATTTTTTT	1	True	NA	-1	True	AATAAA	-15	NA	154850609	154818491	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_154821427_154822471_154822578_154823307_154823593_154830800_154830923_154834624_154834729_154834842_154834935_154838130_154838179_154850482
H1_mix_00072842	chr5	-	539	2	FSM	ENSG00000082516.9	ENST00000522075.1	573	2	34	0	34	0	multi-exon	FALSE	canonical	3	178	junction_1	0	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGCTCTTTTCAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	154892616	154891433	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_154891743_154892386
H1_mix_00072846	chr5	-	2517	3	ISM	ENSG00000170234.13	ENST00000456329.7	3991	4	26213	0	-30	0	3prime_fragment	FALSE	canonical	3	80	junction_2	20	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGTTATTTAAAAATTAT	4125	False	NA	-11	True	AATAAA	-20	NA	160093210	160075881	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_160078169_160080650_160080771_160093100
H1_mix_00072847	chr5	-	3940	4	NIC	ENSG00000170234.13	novel	3991	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_3	11.7756811551038	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGTTATTTAAAAATTAT	4	True	NA	-11	True	AATAAA	-20	NA	160119422	160075881	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_160078169_160093100_160094066_160108544_160108615_160118804
H1_mix_00072848	chr5	-	734	4	FSM	ENSG00000170234.13	ENST00000521424.1	734	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	48.4584587272668	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATGTGAAGTTCTTATCA	4051	False	NA	75	True	AAGAAA	-20	NA	160093284	160077843	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_160078169_160080650_160080771_160089505_160089611_160093100
H1_mix_00072849	chr5	-	1819	3	FSM	ENSG00000170234.13	ENST00000523662.1	1819	3	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	126.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATGAGATGAGGAGAAAAAT	4	True	NA	-14	True	AATAAA	-17	NA	160119422	160077932	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_160078169_160093100_160094066_160118804
H1_mix_00072852	chr5	-	540	4	FSM	ENSG00000145864.14	ENST00000522758.1	1029	4	0	489	0	-489	multi-exon	TRUE	canonical	1	2	junction_1	1.24721912892465	382	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTTGTCCCCAATTCAA	-4	True	NA	NA	False	NA	NA	NA	161546725	161459623	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_161459845_161545226_161545295_161546321_161546414_161546566
H1_mix_00072853	chr5	-	2583	3	Intergenic	novelGene_1215	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTGAACATCAAGTGAATAA	NA	False	NA	NA	False	NA	NA	NA	162280895	162213302	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_-_162213419_162267181_162267355_162278601
H1_mix_00072855	chr5	-	947	5	NNC	ENSG00000170584.11	novel	7967	4	NA	NA	0	28259	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	524.630584316241	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTGTGGTGGCATGTAC	10	True	NA	NA	False	NA	NA	NA	163460102	163418266	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_163418297_163453575_163454051_163456928_163457081_163457561_163457611_163459861
H1_mix_00072856	chr5	-	946	5	NNC	ENSG00000170584.11	novel	7967	4	NA	NA	0	28259	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	524.630584316241	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTGTGGTGGCATGTAC	10	True	NA	NA	False	NA	NA	NA	163460102	163418266	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_163418296_163453575_163454051_163456928_163457081_163457561_163457611_163459861
H1_mix_00072857	chr5	-	1845	4	NIC	ENSG00000170584.11	novel	7967	4	NA	NA	-50	358	combination_of_known_junctions	FALSE	canonical	3	126	junction_3	527.977482684842	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTCTAAGTATAACAATT	-40	True	NA	5	True	AATAAA	-28	NA	163460152	163453564	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_163454051_163456928_163457081_163457561_163457611_163458994
H1_mix_00072860	chr5	-	1445	4	Fusion	ENSG00000254297.1_ENSG00000254365.1	novel	523	2	NA	NA	12	469	multi-exon	FALSE	canonical	3	21	junction_1	42.8330090778907	384	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTTGGTTTTATTTTAT	NA	False	NA	NA	False	AATAAA	-24	NA	167303360	167286850	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr5_-_167287820_167294250_167294401_167297462_167297551_167303122
H1_mix_00072861	chr5	-	1553	5	Fusion	ENSG00000254297.1_ENSG00000254365.1	novel	523	2	NA	NA	0	464	multi-exon	FALSE	canonical	2	2	junction_2	44.6843093266529	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCAGTCCTTGGTTTTAT	NA	False	NA	NA	False	AATAAA	-19	NA	167303372	167286855	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr5_-_167287820_167291941_167292043_167294250_167294401_167297462_167297551_167303122
H1_mix_00072862	chr5	-	10531	8	NNC	ENSG00000120137.7	novel	10274	7	NA	NA	-230	82946	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	81.9018825628992	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCCAGCTGATATAAAACTT	11	True	NA	NA	False	NA	NA	NA	168579598	168465548	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_168465578_168548496_168557622_168559031_168559158_168561392_168561517_168563888_168564066_168566012_168566267_168568645_168568999_168579255
H1_mix_00072863	chr5	-	10536	8	NNC	ENSG00000120137.7	novel	10274	7	NA	NA	-230	23514	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	81.9018825628992	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATATATATATATATATA	11	True	NA	NA	False	NA	NA	NA	168579598	168524980	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_168525015_168548496_168557622_168559031_168559158_168561392_168561517_168563888_168564066_168566012_168566267_168568645_168568999_168579255
H1_mix_00072866	chr5	-	1434	3	ISM	ENSG00000120137.7	ENST00000522176.1	552	4	-230	1727	-212	-1727	5prime_fragment	FALSE	canonical	1	1	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTGAAATTTGTTTTTC	-1	True	NA	NA	False	AATAAA	-18	NA	168579580	168567963	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_168568999_168578633_168578708_168579255
H1_mix_00072867	chr5	-	319	3	FSM	ENSG00000145936.9	ENST00000521859.1	1733	3	354	1060	87	-1060	multi-exon	FALSE	canonical	2	2	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACGGAGGACACTCGGGA	371	False	NA	NA	False	NA	NA	NA	170389280	170383711	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_170383851_170385313_170385472_170389258
H1_mix_00072868	chr5	-	3858	4	NNC	ENSG00000253348.1	novel	602	3	NA	NA	13	2165	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	8.60232526704263	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATGAAAAAGTGGGTC	13	False	NA	-23	True	AATAAA	-15	NA	170767545	170744881	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_170746020_170746910_170747194_170757860_170757979_170765226
H1_mix_00072871	chr5	-	1324	13	FSM	ENSG00000174705.13	ENST00000519643.5	1394	13	0	70	0	-70	multi-exon	FALSE	canonical	1	2	junction_1	91.4567292949695	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACATGAATTTGCTAAAC	160	False	NA	NA	False	NA	NA	NA	172454358	172325250	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_172325381_172346135_172346262_172347282_172347333_172350362_172350590_172353887_172354006_172358772_172358878_172362734_172362870_172373789_172373816_172382035_172382128_172394562_172394640_172406276_172406353_172422415_172422497_172454277
H1_mix_00072873	chr5	-	1546	5	NNC	ENSG00000145919.11	novel	1921	4	NA	NA	0	4372	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	341.322794433656	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTAACATGTAGAGCTGGGG	-2	True	NA	NA	False	NA	NA	NA	173616650	173602772	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_173602799_173607545_173608293_173609237_173609435_173613130_173613256_173616199
H1_mix_00072876	chr5	-	2455	6	FSM	ENSG00000122203.15	ENST00000620366.4	2452	6	0	-3	0	0	multi-exon	FALSE	canonical	2	16	junction_5	278.238458880148	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTATTTTTTTGTCCT	NA	False	NA	-7	True	AATAAA	-22	NA	176361807	176346061	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_176347809_176347920_176348064_176348249_176348357_176350612_176350738_176352621_176352749_176361601
H1_mix_00072881	chr5	-	513	3	FSM	ENSG00000048162.22	ENST00000502577.1	513	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	485	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTCTGAGGTAGCTCTT	-9	True	NA	NA	False	NA	NA	NA	176388598	176385940	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_176386020_176386839_176386910_176388234
H1_mix_00072882	chr5	-	3820	11	NNC	ENSG00000146083.12	novel	4122	11	NA	NA	-292	10	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_10	44.5484006446921	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTGCCTTTGGCTGCCCGT	-2	True	NA	-6	True	AATAAA	-28	NA	176536622	176526701	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_176529091_176529287_176529388_176529522_176529645_176529730_176529819_176530081_176530207_176530581_176530744_176530847_176531013_176531462_176531631_176532003_176532194_176532365_176532517_176536462
H1_mix_00072884	chr5	-	1466	6	FSM	ENSG00000074317.11	ENST00000510387.5	730	6	-258	-478	112	7	multi-exon	FALSE	canonical	3	7	junction_5	30.216551755619	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGCACCGGCAGGGCTGGG	330	False	NA	-5	True	AATAAA	-22	NA	176630252	176620202	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_176620844_176621213_176621304_176626397_176626517_176626719_176626762_176629533_176629664_176629808
H1_mix_00072896	chr5	-	1686	14	FSM	ENSG00000196923.14	ENST00000493815.5	1686	14	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_8	161.178426618144	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTGCCCTTCCCCTG	5088	False	NA	-8	True	AATAAA	-17	NA	177497561	177483393	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177483731_177483866_177483983_177484069_177484191_177488067_177488249_177489392_177489628_177489770_177489833_177490869_177490907_177491009_177491147_177491403_177491421_177491806_177491926_177492404_177492436_177492525_177492678_177496416_177496524_177497527
H1_mix_00072897	chr5	-	2463	13	NIC	ENSG00000196923.14	novel	1712	13	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	300	junction_6	115.349077682581	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTGCCCTTCCCCTG	8	True	NA	-8	True	AATAAA	-17	NA	177497594	177483393	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_177483731_177483866_177483983_177484069_177484191_177488067_177488249_177489392_177489628_177489770_177490594_177490869_177490907_177491009_177491147_177491806_177491926_177492404_177492436_177492525_177492678_177496416_177496524_177497527
H1_mix_00072904	chr5	-	2376	16	FSM	ENSG00000183258.12	ENST00000503078.5	2375	16	0	-1	0	0	multi-exon	FALSE	canonical	3	211	junction_15	41.9314784963384	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGCCCTGCCTCTGTG	-2	True	NA	-17	True	ATTAAA	-19	NA	177516961	177511576	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177511928_177512095_177512207_177512321_177512394_177512495_177512646_177512779_177512877_177513010_177513083_177513352_177513485_177513684_177513848_177514700_177514838_177514915_177515070_177515185_177515259_177515684_177515822_177515928_177515990_177516118_177516194_177516287_177516836_177516918
H1_mix_00072909	chr5	-	3247	12	NIC	ENSG00000146067.16	novel	4604	12	NA	NA	72	1	combination_of_known_splicesites	FALSE	canonical	3	16	junction_10	92.1620025321922	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCATGTTGGTGATTTGT	284	False	NA	1	True	GATAAA	-20	NA	177554275	177519787	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_177520182_177521973_177522072_177523956_177524033_177524184_177525206_177531281_177531522_177531952_177532201_177532442_177532642_177536357_177536746_177537872_177538108_177538904_177539043_177553167_177553351_177554248
H1_mix_00072910	chr5	-	4318	10	NIC	ENSG00000146067.16	novel	4604	12	NA	NA	-22	7	intron_retention	FALSE	canonical	3	60	junction_9	71.0259907218808	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTGATTTGTGGGTCT	NA	False	NA	7	True	GATAAA	-26	NA	177554585	177519781	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_177520182_177521973_177522072_177523956_177524033_177524184_177525206_177531281_177531522_177532442_177532642_177536357_177536746_177537872_177538108_177538904_177539148_177553167
H1_mix_00072912	chr5	-	3485	12	NIC	ENSG00000146067.16	novel	4604	12	NA	NA	57	0	intron_retention	FALSE	canonical	2	17	junction_8	94.8590080327571	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCATGTTGGTGATTTG	850	False	NA	0	True	GATAAA	-19	NA	177553709	177519788	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_177520182_177521973_177522072_177523956_177524033_177524184_177525206_177531281_177531522_177531952_177532201_177532442_177532642_177536357_177536487_177537872_177538108_177538904_177539148_177547167_177547229_177553167
H1_mix_00072913	chr5	-	2768	5	NIC	ENSG00000146067.16	novel	4604	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	3	junction_4	105.846587096609	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCATGTTGGTGATTTG	212	False	NA	0	True	GATAAA	-19	NA	177554347	177519788	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_177520182_177521973_177522072_177523956_177524033_177524184_177525206_177553167
H1_mix_00072926	chr5	-	2026	7	FSM	ENSG00000175309.15	ENST00000476487.5	2251	7	225	0	225	0	multi-exon	FALSE	canonical	3	70	junction_6	10.1159939369957	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGGTTTCCTAAGATAC	8010	False	NA	NA	False	ATTAAA	-17	NA	178224785	178210967	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_178211971_178212972_178213104_178214795_178214886_178215275_178215431_178222354_178222581_178222851_178222935_178224447
H1_mix_00072928	chr5	-	583	4	FSM	ENSG00000175309.15	ENST00000506001.1	583	4	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	4.10960933531265	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTATGGCCTATGCCAACG	2489	False	NA	NA	False	NA	NA	NA	178230306	178224511	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_178224565_178224641_178224730_178225354_178225430_178229939
H1_mix_00072933	chr5	-	2505	13	FSM	ENSG00000113240.14	ENST00000316308.9	2504	13	0	-1	0	1	multi-exon	FALSE	canonical	3	33	junction_10	21.8344465365064	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTGTTGTTGTTGTTCTT	4	True	NA	-4	True	CATAAA	-15	NA	178627050	178602662	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_178603758_178603843_178603935_178605302_178605383_178608375_178608459_178612415_178612546_178612795_178612891_178613472_178613640_178613726_178613844_178616881_178616949_178617343_178617435_178618555_178618779_178623255_178623417_178626945
H1_mix_00072934	chr5	-	2448	13	NIC	ENSG00000113240.14	novel	3722	13	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_11	26.174096609689	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTTTGTTGTTGTTGTTCT	28	True	NA	-5	True	CATAAA	-14	NA	178627026	178602663	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_178603758_178603843_178603935_178605302_178605383_178608375_178608459_178612415_178612546_178612795_178612891_178613472_178613640_178613726_178613844_178616881_178616949_178618555_178618779_178619837_178619897_178623255_178623417_178626945
H1_mix_00072935	chr5	-	3462	12	FSM	ENSG00000113240.14	ENST00000519583.5	3462	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_10	27.1737598270923	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTCTTAAAGGAATATT	13	True	NA	-9	True	AGTAAA	-19	NA	178627041	178603271	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_178603758_178603843_178603935_178605302_178605383_178608375_178608459_178612415_178612546_178612795_178612891_178613472_178613640_178613726_178613844_178616881_178618779_178619837_178619897_178623255_178623417_178626945
H1_mix_00072939	chr5	-	2249	14	FSM	ENSG00000169045.17	ENST00000442819.6	2248	14	0	-1	0	0	multi-exon	FALSE	canonical	3	178	junction_13	96.6853617234669	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTCTTGTCTGTGCTTC	871	False	NA	-3	True	AATAAA	-21	NA	179623721	179614177	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179614960_179615545_179615596_179616125_179616219_179616868_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036_179623165_179623635
H1_mix_00072941	chr5	-	1996	12	FSM	ENSG00000169045.17	ENST00000510678.5	1996	12	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	173.758595720548	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTCTGTCTTGTCTGTGC	1423	False	NA	-6	True	AATAAA	-18	NA	179623169	179614180	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179614960_179615545_179615596_179616125_179616219_179616898_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179620891_179621036_179621241_179621398_179623036
H1_mix_00072948	chr5	-	1013	3	FSM	ENSG00000161013.17	ENST00000518168.5	1013	3	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_2	16.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGTGAGCCGGGACGCGG	-4	True	NA	NA	False	NA	NA	NA	179806952	179801333	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179801695_179801783_179801970_179806486
H1_mix_00072949	chr5	-	1244	8	FSM	ENSG00000161010.16	ENST00000518235.5	1244	8	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	43.568852382857	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAGAAGAGGGGCACGCA	9	True	NA	NA	False	NA	NA	NA	179858806	179836633	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179837205_179837759_179837886_179840871_179840960_179841906_179842065_179844151_179844228_179847977_179848067_179853377_179853438_179858730
H1_mix_00072951	chr5	-	1096	6	FSM	ENSG00000161010.16	ENST00000523084.5	1096	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	59.4521656460049	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTCTATGCAAACGTC	-19	True	NA	-13	True	AATAAA	-15	NA	179858834	179837275	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179837886_179840871_179840960_179841906_179842065_179844151_179844228_179853377_179853438_179858730
H1_mix_00072962	chr5	-	5331	4	FSM	ENSG00000050748.18	ENST00000520212.6	2395	4	0	-2936	0	4	multi-exon	FALSE	canonical	3	286	junction_3	13.6950923894494	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCATGTCCAATTTTTGTG	NA	False	NA	-10	True	GATAAA	-5	NA	180242900	180233589	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_180238404_180239923_180239988_180241030_180241156_180242572
H1_mix_00072963	chr5	-	4404	13	NIC	ENSG00000050748.18	novel	4799	12	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_12	109.310052145262	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATAGCATGTCCAATTTT	-22	True	NA	-14	True	GATAAA	-1	NA	180292046	180233593	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_180236527_180238331_180238404_180239923_180239988_180241030_180241156_180242572_180242756_180247438_180247511_180248972_180249139_180261683_180261823_180264780_180264840_180269279_180269410_180280439_180280609_180286974_180287068_180291847
H1_mix_00072967	chr5	-	608	5	FSM	ENSG00000131459.13	ENST00000518185.1	608	5	0	0	0	0	multi-exon	FALSE	canonical	3	544	junction_1	43.8028252513465	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTCGAGCCATCCAGACC	1	True	NA	NA	False	NA	NA	NA	180330934	180318843	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_180318957_180324187_180324306_180324815_180324896_180328276_180328339_180330699
H1_mix_00072974	chr5	-	2997	4	NNC	ENSG00000196670.14	novel	725	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	30.1809358517739	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCTGTGAGTTTAGATGG	-7	True	NA	-3	True	AATAAA	-20	NA	180861276	180847610	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_180848083_180849153_180851494_180860527_180860655_180861218
H1_mix_00072979	chr5	-	1464	6	FSM	ENSG00000204628.12	ENST00000502844.5	1460	6	0	-4	0	0	multi-exon	FALSE	canonical	0	0	junction_4	4994.69629106716	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCCCAGCATCAAGATCTG	6	True	NA	NA	False	NA	NA	NA	181243370	181238119	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_181238240_181239066_181239178_181239486_181239583_181241491_181241640_181242173_181242346_181242553
H1_mix_00072980	chr5	+	490	1	Intergenic	novelGene_1132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCCTTCTCTTAATTTCA	NA	False	NA	NA	False	NA	NA	NA	5515719	5516209	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_5515700_5516200
H1_mix_00072981	chr5	+	1318	1	FSM	ENSG00000288967.1	ENST00000688058.1	1301	1	-24	7	-24	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	432	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTATTCCCTCTCAGGT	NA	False	NA	NA	False	ATTAAA	-14	NA	12624950	12626268	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_12625000_12626300
H1_mix_00072982	chr5	+	9010	1	Intergenic	novelGene_1136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGCTGTGAGGCTCAGG	3998	False	NA	NA	False	NA	NA	NA	14173219	14182229	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_14173200_14182200
H1_mix_00072983	chr5	+	3022	1	Intergenic	novelGene_1137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAGCAGCTAACAGTTTC	0	True	NA	NA	False	GATAAA	-16	NA	14202331	14205353	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_14202300_14205400
H1_mix_00072984	chr5	+	311	1	Intergenic	novelGene_1140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGCCATCTGAGCTTTCT	NA	False	NA	NA	False	NA	NA	NA	14651629	14651940	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_14651600_14651900
H1_mix_00072985	chr5	+	296	1	Intergenic	novelGene_1141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCTTTTAATGGTTT	NA	False	NA	NA	False	NA	NA	NA	18501769	18502065	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_18501800_18502100
H1_mix_00072986	chr5	+	8328	1	Intergenic	novelGene_1145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	700	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGAGCTACCTGGGCCTG	NA	False	NA	NA	False	AAGAAA	-17	NA	18644928	18653256	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_18644900_18653300
H1_mix_00072987	chr5	+	325	1	Intergenic	novelGene_1152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATCAGTCGGACACGATT	NA	False	NA	NA	False	NA	NA	NA	18670774	18671099	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_18670800_18671100
H1_mix_00072988	chr5	+	905	1	Intergenic	novelGene_1157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTATCCTATATTAATTT	9355	False	NA	NA	False	NA	NA	NA	70410883	70411788	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_70410900_70411800
H1_mix_00072989	chr5	+	221	1	Intergenic	novelGene_1162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTCCAAACGCCTGAATC	NA	False	NA	NA	False	NA	NA	NA	76359336	76359557	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_76359300_76359600
H1_mix_00072990	chr5	+	3869	1	Intergenic	novelGene_1167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1534	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAAAGAAGAG	NA	False	NA	NA	False	NA	NA	NA	78080668	78084537	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_78080700_78084500
H1_mix_00072991	chr5	+	288	1	Intergenic	novelGene_1168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80307373	80307661	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_80307400_80307700
H1_mix_00072992	chr5	+	290	1	Intergenic	novelGene_1169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTTCTGCCACTGCCAT	NA	False	NA	NA	False	NA	NA	NA	80358789	80359079	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_80358800_80359100
H1_mix_00072993	chr5	+	1065	1	Intergenic	novelGene_1172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTTCTTCTAACACCC	NA	False	NA	NA	False	NA	NA	NA	84702470	84703535	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_84702500_84703500
H1_mix_00072994	chr5	+	3988	1	Intergenic	novelGene_1175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACCTTTAA	NA	False	NA	NA	False	NA	NA	NA	98103322	98107310	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_98103300_98107300
H1_mix_00072995	chr5	+	287	1	Intergenic	novelGene_1183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATTCACATACCCAGAAC	NA	False	NA	NA	False	AAAACA	-28	NA	109050684	109050971	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_109050700_109051000
H1_mix_00072996	chr5	+	255	1	Intergenic	novelGene_1184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTTTCTCCAAGCCATC	NA	False	NA	NA	False	NA	NA	NA	110534398	110534653	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_110534400_110534700
H1_mix_00072997	chr5	+	1106	1	Intergenic	novelGene_1189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTCTGAGGACAGGCCTG	NA	False	NA	NA	False	AATAAA	-43	NA	122474212	122475318	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_122474200_122475300
H1_mix_00072998	chr5	+	1226	1	Intergenic	novelGene_1191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4520	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCACTGTGAGAGTTACC	NA	False	NA	NA	False	NA	NA	NA	122475561	122476787	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_122475600_122476800
H1_mix_00072999	chr5	+	261	1	Intergenic	novelGene_1193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGAGTTGGACTGATTA	NA	False	NA	NA	False	AATAAA	-11	NA	123226285	123226546	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_123226300_123226500
H1_mix_00073000	chr5	+	488	1	Intergenic	novelGene_1209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGTTCTCACCCTCCAGA	NA	False	NA	NA	False	NA	NA	NA	136569384	136569872	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_136569400_136569900
H1_mix_00073001	chr5	+	750	1	FSM	ENSG00000289155.1	ENST00000685985.1	752	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGGGTGCTCTGAGAGT	4	True	NA	23	True	AATAAA	-24	NA	138543493	138544243	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_138543500_138544200
H1_mix_00073002	chr5	+	450	1	Intergenic	novelGene_1214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCAGGGTCAGTCTAAGT	NA	False	NA	NA	False	NA	NA	NA	153451664	153452114	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_153451700_153452100
H1_mix_00073005	chr5	+	2931	12	NNC	ENSG00000153404.15	novel	1360	9	NA	NA	-38161	0	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_1	80.7815133094323	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGTGGAGAAAAAAAATTT	340	False	NA	18	True	AATAAA	-29	NA	54006	157110	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_54175_89997_90120_113250_113449_139482_140717_143046_143257_143379_143504_144826_144921_151512_151600_154874_154992_155344_155444_156070_156211_156772
H1_mix_00073006	chr5	+	2912	13	NNC	ENSG00000153404.15	novel	12591	20	NA	NA	-63	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_10	86.6632611510398	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGTGGAGAAAAAAAATTT	NA	False	NA	18	True	AATAAA	-29	NA	92104	157110	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_92277_113250_113449_139482_140110_140224_140717_143046_143257_143379_143504_144826_144921_151512_151600_154874_154992_155344_155444_155580_155795_156070_156211_156772
H1_mix_00073007	chr5	+	4442	8	NNC	ENSG00000153404.15	novel	2165	8	NA	NA	-158	2343	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	16.805004113814	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAGGTAAACTGTGTGAC	NA	False	NA	NA	False	TTTAAA	-36	NA	168894	184932	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_169593_171042_171133_171213_171445_172896_173068_173917_174099_181513_181676_182003_183972_183991
H1_mix_00073009	chr5	+	2762	6	NIC	ENSG00000225138.8	novel	1440	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	15	junction_2	31.3470891790609	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTATAAGTGTCACATGT	490	False	NA	-33	True	NA	NA	NA	473747	480830	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_474047_475136_475320_476049_477466_477805_477850_479865_480217_480361
H1_mix_00073010	chr5	+	791	1	FSM	ENSG00000271781.1	ENST00000607068.1	791	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGGCTCAGGGAGAACCGC	2778	False	NA	9	True	AATAAA	-26	NA	675825	676616	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_675800_676600
H1_mix_00073011	chr5	+	936	3	FSM	ENSG00000248994.2	ENST00000660811.1	1620	3	0	684	0	-684	multi-exon	FALSE	canonical	2	2	junction_2	5.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGCTGGGTGCTCCTGGG	NA	False	NA	NA	False	NA	NA	NA	1931198	1949261	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_1931390_1933808_1933986_1948693
H1_mix_00073012	chr5	+	2682	11	FSM	ENSG00000145536.15	ENST00000511368.5	2682	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_10	3.82753184180093	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATACTCCATACTAATAT	-1	True	NA	NA	False	ATTAAA	-14	NA	5140329	5223727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_5140540_5140663_5140767_5146129_5146456_5182043_5182306_5186051_5186252_5187724_5187809_5189970_5190131_5191684_5191791_5200131_5200270_5209092_5209247_5222788
H1_mix_00073013	chr5	+	6830	17	ISM	ENSG00000145536.15	ENST00000433402.2	3227	20	-128	57576	10	7044	5prime_fragment	FALSE	canonical	3	12	junction_10	4.06922520266451	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACCTGTGTCTTAAATT	9	False	NA	8	True	AATAAA	-15	NA	5140339	5246231	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_5140540_5140663_5140767_5146129_5146456_5182043_5182306_5186051_5186252_5187724_5187809_5189970_5190131_5191684_5191791_5200131_5200270_5209092_5209247_5222788_5222885_5232367_5232517_5235013_5235187_5236968_5237100_5239150_5239275_5239680_5239926_5242052
H1_mix_00073014	chr5	+	5366	4	NNC	ENSG00000285689.1	novel	536	3	NA	NA	-10136	-3020	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.2644968324772	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTCTTGTCCCCTGTC	NA	False	NA	5	True	AATAAA	-21	NA	7262655	7273903	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_7266135_7271523_7271629_7271719_7272921_7273322
H1_mix_00073015	chr5	+	3814	23	NIC	ENSG00000078295.17	novel	6645	25	NA	NA	19	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_22	173.160825499312	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACAGTGCCTGTATCTTT	37	True	NA	17	True	ATTAAA	-18	NA	7396156	7827532	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_7396507_7414572_7414771_7520737_7520900_7626166_7626317_7690690_7690840_7695751_7695864_7698246_7698375_7706743_7706903_7707705_7707839_7709210_7709388_7712855_7712900_7717156_7717238_7724544_7724615_7727163_7727262_7743667_7743753_7766686_7766807_7772931_7773102_7784364_7784450_7789641_7789801_7802217_7802365_7804584_7804693_7816865_7816981_7826718
H1_mix_00073018	chr5	+	3029	26	NIC	ENSG00000145495.16	novel	1963	15	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	54.1472658589517	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAATGTATATTAATTTAT	66	False	NA	-11	True	ATTAAA	-27	NA	10353957	10433960	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_10353997_10377797_10377895_10378758_10378833_10381799_10381944_10386993_10387067_10390331_10390501_10391541_10391732_10394081_10394144_10394752_10394786_10397292_10397345_10400783_10400843_10402058_10402140_10402383_10402453_10402532_10402608_10403406_10403542_10405557_10405678_10407101_10407203_10410138_10410277_10411332_10411538_10414432_10414503_10415487_10415670_10417269_10417405_10423734_10423825_10426389_10426523_10429892_10430029_10433593
H1_mix_00073019	chr5	+	3958	2	FSM	ENSG00000183580.10	ENST00000329673.8	3960	2	2	0	2	0	multi-exon	FALSE	canonical	3	51	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTCAGCTTCATTTTTAA	NA	False	NA	18	True	AATAAA	-18	NA	15927889	15939795	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_15928502_15936449
H1_mix_00073020	chr5	+	600	4	FSM	ENSG00000183666.18	ENST00000691699.1	614	4	14	0	2	0	multi-exon	FALSE	canonical	2	6	junction_3	9.53356643071673	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTGTGAAGGGTCTGGA	-3	True	NA	NA	False	TATAAA	-15	NA	21459493	21466977	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_21459585_21459677_21459744_21461782_21461867_21466618
H1_mix_00073021	chr5	+	1336	5	ISM	ENSG00000183666.18	ENST00000688956.1	1622	9	31804	8041	18036	-8041	internal_fragment	FALSE	canonical	3	14	junction_3	18.2002747232013	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTGAGACTGCTTCTCA	NA	False	NA	NA	False	NA	NA	NA	21491318	21502861	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_21491509_21495097_21495183_21497021_21497197_21501691_21501827_21502110
H1_mix_00073022	chr5	+	1126	5	FSM	ENSG00000250337.8	ENST00000510165.6	1117	5	-14	5	0	-1	multi-exon	FALSE	canonical	0	0	junction_3	18.8065812948553	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATGAGTGTCATTTTGT	-18	True	NA	NA	False	AATAAA	-21	NA	27472269	27496399	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_27472520_27475534_27475696_27477638_27477802_27494234_27494336_27495948
H1_mix_00073024	chr5	+	4528	20	NNC	ENSG00000113407.14	novel	2672	19	NA	NA	-53141	0	intron_retention	TRUE	canonical	0	0	junction_1	416.76852753077	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAGTTTCAAGACTGCTC	NA	False	NA	12	True	AATAAA	-16	NA	33387554	33468086	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_33387588_33439141_33441144_33445323_33445405_33448540_33448732_33453288_33453413_33454944_33455067_33455586_33455705_33456001_33456067_33456148_33456228_33457256_33457404_33458565_33458665_33459694_33459862_33460901_33461065_33461157_33461296_33461666_33461745_33461905_33462007_33462098_33462204_33463752_33463826_33466870_33466986_33467559
H1_mix_00073025	chr5	+	647	1	FSM	ENSG00000271771.1	ENST00000607051.1	647	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCTAATTTATTTGAATA	NA	False	NA	NA	False	TATAAA	-23	NA	34158120	34158767	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_34158100_34158800
H1_mix_00073026	chr5	+	8041	1	FSM	ENSG00000215156.5	ENST00000505001.2	3598	1	-3898	-545	-3898	545	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTCTAATTTAAGCTCTC	NA	False	NA	NA	False	AATAAA	-9	NA	34186157	34194198	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_34186200_34194200
H1_mix_00073027	chr5	+	350	3	FSM	ENSG00000205838.14	ENST00000508377.5	348	3	-2	0	-2	0	multi-exon	FALSE	canonical	1	2	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGTTCCTGTTTAGAGA	17	True	NA	NA	False	ACTAAA	-19	NA	34839211	34845713	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_34839260_34840664_34840740_34845486
H1_mix_00073028	chr5	+	2000	11	NIC	ENSG00000168724.17	novel	6107	12	NA	NA	32	-1	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	83.2171256413006	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTAACACACAGAAGTG	-4	True	NA	-4	True	NA	NA	NA	34929624	34955017	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_34929917_34935709_34935834_34936143_34936267_34937325_34937631_34938857_34939010_34941095_34941184_34944866_34945026_34945760_34945804_34950169_34950343_34953925_34954002_34954552
H1_mix_00073029	chr5	+	2356	12	FSM	ENSG00000168724.17	ENST00000642675.1	2338	12	-18	0	-18	0	multi-exon	FALSE	canonical	3	15	junction_1	77.9501854068268	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTCCGATTTTAAAAATT	11	False	NA	-25	True	AAAAAG	-29	NA	34929958	34955168	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_34930362_34933814_34933909_34935709_34935834_34936143_34936267_34937325_34937631_34938857_34939010_34941095_34941184_34944866_34945026_34945760_34945804_34950169_34950343_34953925_34954002_34954552
H1_mix_00073030	chr5	+	1618	11	FSM	ENSG00000145604.17	ENST00000513151.6	1602	11	-16	0	-13	0	multi-exon	FALSE	canonical	0	0	junction_10	286.70535397861	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTCTACTTTTATAGAC	46	False	NA	-38	True	NA	NA	NA	36152053	36183974	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_36152271_36152770_36153043_36163644_36163757_36166518_36166663_36168312_36168448_36170343_36170443_36171602_36171734_36176964_36177017_36177184_36177293_36178597_36178811_36183839
H1_mix_00073034	chr5	+	3877	10	FSM	ENSG00000079215.15	ENST00000680318.1	3877	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	24.2395452835971	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATCTTTGCACGTTGTT	-6	True	NA	15	True	AATAAA	-20	NA	36596587	36688331	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_36596679_36608328_36608605_36629449_36629588_36671028_36671234_36674048_36674092_36676891_36677185_36679626_36679861_36680394_36680590_36683863_36683999_36686064
H1_mix_00073035	chr5	+	817	1	FSM	ENSG00000244073.1	ENST00000477670.1	797	1	1	-21	1	21	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATCTTTGTACATAATTA	24	False	NA	NA	False	NA	NA	NA	37085056	37085873	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_37085100_37085900
H1_mix_00073037	chr5	+	4677	22	FSM	ENSG00000164318.18	ENST00000322350.10	4720	22	39	4	39	-4	multi-exon	TRUE	canonical	1	1	junction_2	1.91070501407037	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACTTTGTGCCCCAATCT	39	False	NA	NA	False	AATAAA	-10	NA	38258597	38465476	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_38258852_38337519_38337630_38338697_38338782_38350500_38350619_38352195_38352332_38370295_38370463_38406125_38406242_38406827_38407147_38407804_38407906_38409003_38409105_38412503_38412649_38418065_38418256_38424966_38425093_38427008_38427253_38431176_38431289_38435136_38435254_38438274_38438456_38448300_38448380_38451314_38451459_38458310_38458395_38462907_38463012_38463831
H1_mix_00073038	chr5	+	2901	1	NIC	ENSG00000244968.7	novel	3626	7	NA	NA	4	-7686	mono-exon	FALSE	NA	NA	NA	NA	NA	304	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTAAAAGTGTAGGTTTT	12	True	NA	NA	False	AATAAA	-33	NA	38556795	38559696	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_38556800_38559700
H1_mix_00073039	chr5	+	3384	3	FSM	ENSG00000171522.6	ENST00000302472.4	3431	3	5	42	5	-42	multi-exon	FALSE	canonical	1	3	junction_2	2.5	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAAATTATTTTGGAGAT	-14	True	NA	-39	True	ATTAAA	-45	NA	40679919	40693693	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_40680479_40680950_40681861_40691778
H1_mix_00073040	chr5	+	1599	7	FSM	ENSG00000151876.13	ENST00000281623.8	1655	7	-6	62	-6	-62	multi-exon	FALSE	canonical	1	1	junction_2	2.26691175145591	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGTTATCAGAAAAGAAATT	6	True	NA	NA	False	NA	NA	NA	41925274	41941681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_41925499_41927012_41927249_41929696_41929918_41933945_41934022_41934132_41934309_41939440_41939617_41941191
H1_mix_00073041	chr5	+	820	1	FSM	ENSG00000272382.1	ENST00000607830.1	920	1	102	-2	102	2	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTGCCTGTGTTCCTGT	NA	False	NA	10	True	AATAAA	-22	NA	43033817	43034637	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_43033800_43034600
H1_mix_00073042	chr5	+	733	3	FSM	ENSG00000172262.12	ENST00000503599.5	750	3	17	0	17	0	multi-exon	FALSE	canonical	1	1	junction_1	1.5	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAGACTCTGTCTCTAA	74	False	NA	NA	False	NA	NA	NA	43065192	43080343	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_43065234_43067969_43068218_43079899
H1_mix_00073043	chr5	+	2603	8	FSM	ENSG00000172262.12	ENST00000510026.5	2599	8	-4	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	60.8199081262854	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACACCCATGTGCCTTCT	-8	True	NA	NA	False	NA	NA	NA	43120913	43175734	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_43121124_43122038_43122178_43123208_43123311_43139164_43139310_43161248_43161614_43161708_43161932_43173317_43173449_43174446
H1_mix_00073044	chr5	+	4527	22	NIC	ENSG00000112992.18	novel	6483	22	NA	NA	2	71	combination_of_known_junctions	TRUE	canonical	1	3	junction_1	21.9861840765839	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATACTCAGATTATTTGTC	1	True	NA	96	True	AATATA	-15	NA	43602693	43705557	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_43602754_43609142_43609347_43612907_43613138_43615847_43616066_43619031_43619120_43624031_43624121_43628199_43628388_43644191_43644326_43644610_43644803_43645356_43645511_43649146_43649309_43650476_43650588_43651738_43651885_43653017_43653214_43655839_43656074_43656652_43656814_43659170_43659351_43675510_43675671_43677724_43677807_43700118_43700238_43702620_43702737_43704254
H1_mix_00073047	chr5	+	8304	26	FSM	ENSG00000151883.19	ENST00000505554.5	3825	26	-1334	-3145	-151	0	multi-exon	FALSE	canonical	3	11	junction_1	20.198851452496	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACGGTATATGTGGGCAGT	292	False	NA	NA	False	AATAAA	-19	NA	50666222	50846519	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_50667602_50668070_50668126_50750150_50750189_50759642_50759733_50760291_50760363_50761820_50761899_50763147_50763243_50778068_50778130_50778559_50778651_50788522_50788590_50794206_50794333_50794852_50795418_50796981_50797033_50797137_50797234_50815431_50815525_50821212_50821339_50822334_50822401_50824907_50824976_50826754_50826804_50827943_50828057_50828311_50828385_50829891_50829962_50832780_50832855_50833978_50834049_50834930_50835016_50841965
H1_mix_00073049	chr5	+	1529	3	ISM	ENSG00000016082.15	ENST00000505475.3	1212	5	3311	-869	3311	-294	3prime_fragment	FALSE	canonical	3	20	junction_2	2.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAGGAAAAAAAAAAAG	3340	False	NA	16	True	NA	NA	NA	51389514	51394436	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_51389933_51391273_51391442_51393493
H1_mix_00073050	chr5	+	4383	3	FSM	ENSG00000152684.11	ENST00000274311.3	4371	3	-12	0	-12	0	multi-exon	FALSE	canonical	0	0	junction_1	67.5	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTCTGTTATCAAGAAT	-40	True	NA	NA	False	AATAAA	-25	NA	52787903	52804044	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_52788415_52799884_52801121_52801408
H1_mix_00073051	chr5	+	4000	4	ISM	ENSG00000134363.12	ENST00000256759.8	2299	6	-275	0	-272	0	intron_retention	FALSE	canonical	3	246	junction_2	9.7410927974683	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTCAATTCCTGATGAT	119	False	NA	13	True	AATAAA	-38	NA	53480353	53487134	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_53480877_53482879_53483072_53483503_53483723_53484068
H1_mix_00073052	chr5	+	705	4	FSM	ENSG00000134363.12	ENST00000504226.5	705	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	93.6055553906925	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAGAAAAAAAGAA	656	False	NA	NA	False	NA	NA	NA	53483610	53486090	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_53483723_53484068_53484294_53484999_53485228_53485950
H1_mix_00073054	chr5	+	1357	1	FSM	ENSG00000217791.4	ENST00000513426.1	1236	1	8	-129	8	129	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTTTGTTCTCTGGTCC	NA	False	NA	NA	False	GGGGCT	-9	NA	53859173	53860530	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_53859200_53860500
H1_mix_00073056	chr5	+	588	3	FSM	ENSG00000164182.12	ENST00000511107.1	586	3	-2	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	345.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTTGTATTTTCTGAA	-10	True	NA	28	True	AATAAA	-16	NA	60945204	61153026	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_60945429_61098991_61099033_61152703
H1_mix_00073057	chr5	+	4389	31	NNC	ENSG00000086200.17	novel	4365	30	NA	NA	3	38366	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_30	52.2128549518432	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAAATGCAGAGAT	-7	True	NA	NA	False	AAAAAG	-2	NA	62412765	62666948	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_62412930_62437273_62437418_62442982_62443084_62449926_62450000_62451729_62451934_62467130_62467264_62470249_62470309_62474415_62474465_62476682_62476754_62483100_62483294_62484009_62484163_62485418_62485463_62487770_62487862_62489301_62489350_62490114_62490221_62493997_62494125_62504666_62504701_62504857_62504899_62506240_62506358_62515387_62515502_62526141_62526258_62530708_62530786_62536701_62536782_62537208_62537290_62550366_62550463_62551222_62551337_62561135_62561258_62591576_62591673_62601763_62601849_62627153_62628581_62666919
H1_mix_00073058	chr5	+	612	4	FSM	ENSG00000145642.12	ENST00000506473.5	612	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	258.470286278498	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGATGATATAATTCAAGAA	25	False	NA	-5	True	AATGAA	-14	NA	64690531	64717963	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_64690815_64694086_64694183_64695506_64695665_64717888
H1_mix_00073060	chr5	+	5994	10	FSM	ENSG00000113597.18	ENST00000512009.5	5994	10	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_7	16.5604019752012	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTCTTTGTTTCAAAAT	-28	True	NA	12	True	AATAAA	-23	NA	65625003	65666074	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_65625107_65635300_65635370_65635943_65636044_65637695_65637781_65647054_65647183_65650809_65650883_65652500_65652546_65658367_65658502_65660698_65664385_65664503
H1_mix_00073061	chr5	+	1503	11	ISM	ENSG00000113597.18	ENST00000505553.5	1410	12	24	2	0	0	intron_retention	FALSE	canonical	3	80	junction_10	27.4	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGATTTTATCTTGTAA	37	False	NA	9	True	ATTAAA	-16	NA	65625068	65664764	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_65625107_65635300_65635370_65635943_65636044_65637695_65637781_65647054_65647183_65650809_65650883_65652500_65652546_65658367_65658502_65660698_65660898_65662049_65662151_65664233
H1_mix_00073062	chr5	+	4944	22	ISM	ENSG00000112851.15	ENST00000380938.6	4701	24	-850	3706	-796	0	5prime_fragment	FALSE	canonical	3	73	junction_21	10.4727267001076	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGAATAATCAAGACTAT	3	True	NA	NA	False	AAAACA	-5	NA	65925759	66075230	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_65926807_65988634_65988683_65992709_65992908_65994746_65994865_66012048_66012128_66013548_66013639_66014668_66014726_66021321_66021386_66023289_66023365_66024305_66024451_66025479_66025553_66025847_66025978_66026301_66026418_66028273_66028344_66038382_66038483_66043076_66043199_66044136_66044311_66046352_66046539_66048666_66048782_66050782_66050967_66053405_66054952_66075023
H1_mix_00073064	chr5	+	1717	2	FSM	ENSG00000285999.1	ENST00000651719.1	1759	2	42	0	42	0	multi-exon	FALSE	canonical	0	0	junction_1	0	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTTTAGAATTACTTGTT	6060	False	NA	NA	False	NA	NA	NA	66085446	66093937	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_66085508_66092281
H1_mix_00073065	chr5	+	6660	12	NIC	ENSG00000153914.16	novel	6699	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	49	junction_10	52.3607953774767	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTGTTGAGTAGTAATT	8	True	NA	19	True	AATAAA	-20	NA	66144335	66183615	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_66144538_66153462_66153597_66159218_66159335_66162108_66162274_66162413_66162593_66163791_66163923_66164782_66164898_66170050_66170171_66170584_66170948_66174945_66175042_66177516_66177659_66178718
H1_mix_00073067	chr5	+	5273	8	FSM	ENSG00000069020.19	ENST00000443808.1	5273	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2.72554057547699	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATTACCTTTAC	NA	False	NA	NA	False	NA	NA	NA	67142433	67167283	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_67142534_67144668_67144797_67145143_67145380_67152636_67152867_67153457_67153581_67160455_67160593_67162606_67162789_67163146
H1_mix_00073068	chr5	+	200	1	FSM	ENSG00000249238.1	ENST00000506012.1	2561	1	2089	272	2089	-272	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGGGGAATAGCATGACT	NA	False	NA	NA	False	NA	NA	NA	67638470	67638670	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_67638500_67638700
H1_mix_00073069	chr5	+	1251	3	FSM	ENSG00000145740.20	ENST00000502979.1	681	3	-264	-306	-57	0	multi-exon	FALSE	canonical	3	62	junction_1	20.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTTTGTATTTCTTCA	NA	False	NA	14	True	AATAAA	-16	NA	69093933	69104740	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_69094339_69103061_69103129_69103961
H1_mix_00073071	chr5	+	1366	12	NIC	ENSG00000134058.12	novel	1426	12	NA	NA	-2	-13	combination_of_known_junctions	FALSE	canonical	3	19	junction_4	171.976934836339	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGAGTGCAAAAGTGAGAA	28	False	NA	39	True	AATAAA	-23	NA	69234838	69277325	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_69235042_69235393_69235454_69252417_69252452_69254601_69254668_69255459_69255529_69258042_69258154_69259817_69259937_69262204_69262305_69269206_69269294_69272891_69273042_69276542_69276691_69277106
H1_mix_00073077	chr5	+	7836	9	NNC	ENSG00000198237.8	novel	633	5	NA	NA	-30567	64333	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_7	30.4915459594951	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACAGGAGACATTTCTGG	326	False	NA	NA	False	NA	NA	NA	69844703	69985200	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_69844914_69873663_69873698_69875163_69875320_69910374_69910563_69914157_69914243_69916080_69916256_69920731_69920868_69975737_69975853_69978463
H1_mix_00073078	chr5	+	1569	9	FSM	ENSG00000205571.14	ENST00000506734.5	1550	9	-19	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	633.371533935651	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATCTGTGATTGTATTT	NA	False	NA	NA	False	AATAAA	-26	NA	70049637	70077596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_70049767_70063414_70063487_70065964_70066085_70066933_70067135_70067293_70067447_70069234_70069331_70070640_70070752_70071281_70071391_70077018
H1_mix_00073079	chr5	+	1316	7	NIC	ENSG00000205571.14	novel	1440	8	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_5	622.827357031358	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTATCTGTGATTGT	12	False	NA	NA	False	AATAAA	-22	NA	70049681	70077592	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_70049767_70063414_70063487_70065964_70066085_70066933_70067135_70067293_70067447_70070640_70070752_70077018
H1_mix_00073080	chr5	+	295	1	FSM	ENSG00000253492.1	ENST00000517935.1	295	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAGTAGGCAAATCAAAAT	NA	False	NA	NA	False	NA	NA	NA	70132678	70132973	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_70132700_70133000
H1_mix_00073081	chr5	+	4391	16	Fusion	ENSG00000269983.1_ENSG00000226259.10	novel	1954	15	NA	NA	-15	2	multi-exon	FALSE	canonical	0	0	junction_3	108.630996190467	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTGATATATTTTATTTA	20	False	NA	NA	False	AATAAA	-24	NA	70415380	70450355	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr5_+_70415551_70420248_70420338_70421279_70421358_70421736_70421772_70422112_70422200_70422872_70422924_70423298_70423354_70427584_70427691_70433869_70433961_70434178_70434267_70434914_70435023_70437530_70437595_70440755_70440860_70441415_70441519_70445482_70445523_70447233
H1_mix_00073085	chr5	+	295	1	FSM	ENSG00000253900.1	ENST00000517835.1	295	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAGTAGGCAAATCAAAAT	NA	False	NA	NA	False	NA	NA	NA	71132992	71133287	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_71133000_71133300
H1_mix_00073086	chr5	+	5511	16	FSM	ENSG00000145734.20	ENST00000514903.7	5511	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	23.1961682659491	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTTGTGTCCTTTTAA	3938	False	NA	7	True	AATAAA	-16	NA	71522792	71567820	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_71522950_71523938_71524324_71532307_71532428_71539041_71539079_71539556_71539650_71541456_71541683_71542104_71542266_71544356_71544508_71545038_71545220_71548681_71548746_71553115_71553321_71556885_71556926_71559981_71560238_71562273_71562521_71562774_71562896_71564753
H1_mix_00073087	chr5	+	1521	11	FSM	ENSG00000131844.17	ENST00000683665.1	2110	11	-10	599	-6	0	multi-exon	FALSE	canonical	3	207	junction_6	47.0366878085607	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTAGTTCTTTTTGTTTT	NA	False	NA	18	True	AGTAAA	-15	NA	71587269	71641368	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_71587555_71592925_71592993_71596279_71596365_71599658_71599761_71602505_71602634_71604355_71604469_71626639_71626754_71632120_71632186_71634942_71635043_71635150_71635247_71641002
H1_mix_00073089	chr5	+	2023	9	FSM	ENSG00000049883.15	ENST00000543322.5	2029	9	6	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	30.1662062579967	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTGTCTGGTCACCAGTG	-10	True	NA	NA	False	AATATA	-17	NA	72320372	72359352	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_72320510_72322171_72322265_72326611_72326742_72331257_72331376_72335793_72335886_72338621_72338736_72342961_72343037_72352640_72352755_72358202
H1_mix_00073090	chr5	+	2017	11	NNC	ENSG00000049883.15	novel	11145	10	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	32.2297998752707	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATAGTTTATCTTATTTG	6	True	NA	6	True	AATAAA	-9	NA	72320388	72359223	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_72320510_72321119_72321180_72322171_72322265_72326611_72326742_72331257_72331376_72335017_72335097_72335793_72335886_72338621_72338736_72342961_72343037_72352640_72352755_72358202
H1_mix_00073091	chr5	+	10689	24	FSM	ENSG00000083312.19	ENST00000680533.1	11040	24	338	13	1	-13	multi-exon	FALSE	canonical	1	2	junction_23	51.6997292428183	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAGTCGCAATGCTTAA	-25	True	NA	NA	False	AATAAA	-7	NA	72816649	72916720	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_72816753_72848384_72848499_72851243_72851320_72855773_72855924_72861807_72861915_72865595_72865730_72872638_72872721_72875614_72875738_72877227_72877347_72882466_72882528_72883063_72883233_72887069_72887223_72888077_72888304_72889785_72889958_72891809_72891897_72893138_72893247_72893376_72893536_72893615_72893704_72896457_72896557_72897055_72897152_72900005_72900082_72900973_72901074_72903708_72903784_72908708
H1_mix_00073092	chr5	+	8412	24	FSM	ENSG00000083312.19	ENST00000679378.1	8412	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	41.7566992010426	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAGTTGTTTAACTATA	-12	True	NA	-1	True	AATAGA	-31	NA	72848120	72914368	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_72848252_72848384_72848499_72851243_72851320_72855773_72855924_72861807_72861915_72865595_72865730_72872638_72872721_72875614_72875738_72877227_72877347_72882466_72882528_72883063_72883233_72887069_72887223_72888077_72888304_72889785_72889958_72891809_72891897_72893138_72893247_72893376_72893536_72893615_72893704_72896457_72896557_72900005_72900082_72900973_72901074_72903708_72903784_72905302_72905446_72908708
H1_mix_00073093	chr5	+	4840	24	NIC	ENSG00000157107.14	novel	4921	26	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	19.577773748635	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATTGGTTTATGTGTCTT	29	False	NA	7	True	AATAAA	-19	NA	72956084	73090522	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_72956130_72968497_72968590_72989426_72989502_72990477_72990620_72990711_72990865_73006444_73006550_73015625_73015725_73017211_73017309_73034656_73034702_73037142_73037216_73041290_73041316_73051348_73051407_73052331_73052508_73056064_73056108_73058432_73058525_73063840_73063945_73068649_73068780_73074741_73074854_73077337_73077494_73078179_73078313_73081782_73081983_73082760_73082826_73087588_73087754_73088067
H1_mix_00073094	chr5	+	1249	4	FSM	ENSG00000157111.13	ENST00000454765.7	1244	4	-5	0	1	0	multi-exon	FALSE	canonical	1	2	junction_3	6.18241233033047	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTATATTCTGACTTTC	-2	True	NA	12	True	AATAAA	-14	NA	73120569	73131809	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_73120697_73123305_73124014_73128389_73128532_73131537
H1_mix_00073095	chr5	+	1143	5	FSM	ENSG00000145741.17	ENST00000677654.1	1143	5	0	0	0	0	multi-exon	FALSE	canonical	2	3711	junction_3	577.608160866863	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGAAGAGGGGGGCATTT	25	False	NA	NA	False	NA	NA	NA	73498465	73505011	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_73498559_73499133_73499203_73502487_73502602_73502915_73503118_73504346
H1_mix_00073096	chr5	+	5917	36	FSM	ENSG00000214944.10	ENST00000513042.7	6233	36	0	316	0	85	multi-exon	TRUE	canonical	0	0	junction_9	1.77832757938234	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCATCAAGTCATTTTGAT	1	True	NA	NA	False	NA	NA	NA	73626195	73941674	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_73626323_73684840_73684885_73749836_73749985_73752908_73753203_73773854_73774039_73776515_73776697_73780675_73780746_73794401_73794455_73795330_73795392_73832337_73832460_73840479_73840761_73846267_73846476_73848975_73849088_73852649_73852693_73857655_73857780_73858086_73858220_73864816_73864873_73865964_73866014_73867875_73868021_73868099_73868228_73870068_73870210_73872998_73873247_73882471_73882595_73883766_73883885_73885849_73886105_73887602_73887680_73892051_73892231_73893196_73893289_73894392_73894576_73897961_73898094_73901183_73901285_73904221_73904261_73904357_73904406_73909411_73909898_73911274_73911576_73940843
H1_mix_00073100	chr5	+	319	4	FSM	ENSG00000189045.15	ENST00000594319.1	791	4	472	0	-89	0	multi-exon	FALSE	canonical	1	2	junction_1	2.49443825784929	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTGCTGATCGTGGAAAT	NA	False	NA	NA	False	NA	NA	NA	75635783	75659304	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_75635883_75653141_75653241_75656028_75656128_75659282
H1_mix_00073101	chr5	+	2140	7	NNC	ENSG00000145708.11	novel	1645	7	NA	NA	-496	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	7.61030003788725	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTTGGGCTTTATTTGC	NA	False	NA	5	True	AATAAA	-23	NA	76952548	76969471	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_76953216_76953600_76953695_76954028_76954187_76955652_76955863_76958740_76958890_76963342_76963461_76968727
H1_mix_00073102	chr5	+	1132	4	FSM	ENSG00000250802.7	ENST00000642277.1	1132	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1.69967317119759	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAACATGAACGGGCCATTT	790	False	NA	NA	False	AAGAAA	-16	NA	77087556	77148461	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_77087620_77118319_77118522_77139260_77139318_77147651
H1_mix_00073103	chr5	+	5066	5	ISM	ENSG00000113231.14	ENST00000505283.1	3474	9	7860	-2733	7860	2672	3prime_fragment	FALSE	canonical	1	2	junction_1	1.87082869338697	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAATTGCTGTAATCT	NA	False	NA	NA	False	ATTAAA	-32	NA	77418283	77430928	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_77418447_77419766_77419888_77421820_77421989_77425766_77425897_77426444
H1_mix_00073104	chr5	+	507	1	FSM	ENSG00000213755.3	ENST00000482584.1	486	1	5	-26	5	26	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGCCATCTGCATGGGG	52	False	NA	NA	False	NA	NA	NA	79510438	79510945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_79510400_79510900
H1_mix_00073105	chr5	+	476	3	NNC	ENSG00000113296.14	novel	573	5	NA	NA	15	-35804	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	22.5	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCTCCTGTGTATGTG	2	True	NA	10	True	AATAAA	-24	NA	79991346	80020102	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_79991413_79998331_79998376_80019736
H1_mix_00073108	chr5	+	1476	10	FSM	ENSG00000131730.16	ENST00000254035.9	1476	10	-2	2	0	0	multi-exon	FALSE	canonical	1	1	junction_5	2.98556196500987	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTTGCTTTGTTTCTCT	-3	True	NA	NA	False	AATAAA	-14	NA	81233319	81266396	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_81233378_81251112_81251285_81252694_81252894_81254395_81254492_81254992_81255215_81256914_81257001_81257732_81257857_81259119_81259255_81263490_81263617_81266138
H1_mix_00073111	chr5	+	603	1	FSM	ENSG00000249483.1	ENST00000512859.1	601	1	3	-5	3	5	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTCTTTTTTTTTTTTTT	NA	False	NA	8	True	AATAAA	-16	NA	81851603	81852206	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_81851600_81852200
H1_mix_00073112	chr5	+	440	1	Genic_Genomic	ENSG00000214857.4	novel	NA	NA	NA	NA	-38	170	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATAAGTACCAAGATGAT	NA	False	NA	NA	False	AATAAA	-20	NA	81892451	81892891	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr5_+_81892500_81892900
H1_mix_00073113	chr5	+	1881	8	NNC	ENSG00000152348.16	novel	618	5	NA	NA	-6634	-17	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	47.3588127264308	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTGTCCCTGAAACTG	1	True	NA	8	True	ATTAAA	-9	NA	81980923	82254775	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_81981418_81987558_81987679_82058494_82058603_82164398_82164538_82178489_82178588_82252561_82252660_82253313_82253430_82254067
H1_mix_00073114	chr5	+	1604	2	FSM	ENSG00000127184.13	ENST00000509578.1	1584	2	-15	-5	0	0	multi-exon	FALSE	canonical	3	12227	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTAATGCCTCTTTTTTG	5	True	NA	29	True	AATAAA	-14	NA	86617940	86620766	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_86618131_86619352
H1_mix_00073116	chr5	+	3735	24	NNC	ENSG00000145715.15	novel	4746	25	NA	NA	-52	-3682	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	39.8523740852015	499	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTACGAATGAGGGTATT	-27	True	NA	NA	False	AATAAA	-17	NA	87267830	87387417	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_87268991_87331347_87331501_87332506_87332643_87333266_87333338_87337973_87338092_87341289_87341322_87346671_87346725_87349213_87349365_87353156_87353236_87362550_87362672_87363347_87363505_87369812_87369901_87372117_87372196_87374162_87374321_87374839_87374917_87376392_87376566_87376880_87377041_87378395_87378539_87379734_87379851_87380508_87380596_87383712_87383781_87385300_87385390_87386825_87386904_87387228
H1_mix_00073117	chr5	+	979	8	NIC	ENSG00000247828.9	novel	932	7	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	37.3772821977441	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGGTAGTTTGTTACA	12	True	NA	11	True	AATAAA	-23	NA	88269047	88287657	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_88269120_88269467_88269688_88270525_88270586_88282041_88282107_88282714_88282867_88283009_88283087_88285740_88285852_88287435
H1_mix_00073118	chr5	+	5190	26	FSM	ENSG00000164199.18	ENST00000509621.1	5211	26	0	21	0	-21	multi-exon	FALSE	canonical	2	5	junction_1	7.14154045007098	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	90694059	90759961	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_90694702_90696936_90697147_90703664_90703796_90704388_90704489_90705399_90705580_90706230_90706395_90708815_90708910_90710980_90711060_90711183_90711323_90712286_90712429_90716466_90716730_90720047_90720224_90720934_90721060_90724831_90724990_90725085_90725233_90725548_90725657_90728668_90728934_90729641_90729765_90745045_90745266_90745590_90745796_90750550_90750698_90753573_90753830_90754982_90755186_90756453_90756631_90756978_90757162_90759408
H1_mix_00073119	chr5	+	9904	46	ISM	ENSG00000164199.18	ENST00000405460.9	19557	90	161847	222	462	0	3prime_fragment	TRUE	canonical	2	9	junction_5	34.8356706640949	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGTATCATCCAGCTTC	NA	False	NA	13	True	AATAAA	-13	NA	90720643	91164215	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_90721060_90724831_90724990_90725085_90725233_90725548_90725657_90728668_90728934_90729641_90729765_90745045_90745266_90745590_90745796_90750550_90750698_90753573_90753830_90754982_90755186_90756453_90756631_90756978_90757162_90759408_90759589_90763304_90763470_90774185_90774304_90776452_90776577_90777904_90778044_90778426_90778610_90778864_90779098_90781429_90781579_90783123_90783326_90783837_90784058_90788070_90788311_90789701_90789852_90790872_90791347_90802738_90802883_90805283_90805459_90807601_90807738_90810232_90811339_90815618_90815737_90823424_90823597_90828943_90829187_90840577_90840986_90848636_90848822_90853283_90853534_90854061_90854202_90855740_90855902_90863756_90863858_90965414_90965532_90985343_90985523_91072446_91072605_91102218_91102341_91150029_91150222_91153220_91153399_91163781
H1_mix_00073121	chr5	+	1301	7	NIC	ENSG00000164199.18	novel	893	6	NA	NA	44	1	combination_of_known_junctions	FALSE	canonical	2	18	junction_5	51.2144185426982	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTGGTATCATCCAGCT	NA	False	NA	11	True	AATAAA	-11	NA	90929283	91164213	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_90929399_90965414_90965532_90985343_90985523_91072446_91072605_91102218_91102341_91153220_91153399_91163781
H1_mix_00073122	chr5	+	2458	3	FSM	ENSG00000281357.4	ENST00000625713.2	2500	3	39	3	-9	-3	multi-exon	FALSE	canonical	1	3	junction_2	4.5	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCCAGGGCTGTTCTAGA	11	True	NA	NA	False	AATAAA	-18	NA	91380387	91420712	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_91380925_91418708_91418772_91418854
H1_mix_00073123	chr5	+	3773	21	NIC	ENSG00000133302.13	novel	5583	21	NA	NA	-2	0	combination_of_known_junctions	TRUE	canonical	3	12	junction_11	24.6050807761324	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATATTCTTTTGGTTTTT	5	True	NA	NA	False	AATAAA	-25	NA	94618682	94695871	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_94618766_94628810_94628925_94629091_94629168_94630502_94630744_94643272_94643436_94649453_94649598_94651701_94651846_94653271_94653422_94654629_94654753_94662297_94662352_94663749_94663909_94665906_94666025_94670150_94670280_94670842_94671009_94678807_94678956_94686572_94686719_94688505_94688670_94689472_94689607_94691563_94691657_94692073_94692257_94694830
H1_mix_00073124	chr5	+	3213	29	NIC	ENSG00000153113.24	novel	4330	31	NA	NA	26	61	intron_retention	FALSE	canonical	1	3	junction_2	60.1649094284252	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATAAAACCTGAGCAGCAA	4	True	NA	68	True	AGTAAA	-21	NA	96662262	96773473	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_96662498_96675538_96675602_96722638_96722699_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765220_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
H1_mix_00073125	chr5	+	4276	31	FSM	ENSG00000153113.24	ENST00000675663.1	4263	31	-13	0	-9	0	multi-exon	FALSE	canonical	1	1	junction_1	48.794364428692	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTTAGAGGCAAAGAACAAT	1	True	NA	NA	False	NA	NA	NA	96662990	96774481	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_96663167_96675538_96675602_96695835_96695908_96722638_96722699_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765220_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
H1_mix_00073128	chr5	+	540	4	FSM	ENSG00000113441.16	ENST00000473914.1	700	4	11	149	11	-149	multi-exon	FALSE	canonical	2	2	junction_3	2.05480466765633	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACATGCCCTCTTTCTTTT	NA	False	NA	NA	False	TTTAAA	-34	NA	96996388	97006233	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_96996504_96998013_96998146_97003414_97003547_97006072
H1_mix_00073129	chr5	+	295	1	FSM	ENSG00000176183.8	ENST00000512165.1	1089	1	-117	911	-117	-911	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTGACCCTGAAGTACCC	NA	False	NA	NA	False	NA	NA	NA	98338626	98338921	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_98338600_98338900
H1_mix_00073130	chr5	+	3452	24	NIC	ENSG00000145730.21	novel	3649	25	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_22	44.3978830878715	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTCAGTGTATTTTC	15	True	NA	15	True	AATAAA	-15	NA	102755317	103029713	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_102755349_102865822_102866285_102867272_102867394_102901355_102901414_102913933_102914022_102924956_102925043_102926584_102926669_102946836_102946886_102948377_102948446_102949536_102949618_102949901_102949979_102950716_102950821_102959874_102960060_102961157_102961230_102990271_102990402_103003032_103003150_103005153_103005227_103006800_103007012_103007456_103007658_103009750_103009867_103017333_103017434_103019789_103019844_103028181_103028239_103028886
H1_mix_00073131	chr5	+	3399	24	NNC	ENSG00000145730.21	novel	3649	25	NA	NA	134	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	68.9381794783708	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTCAGTGTATTTTC	13	False	NA	15	True	AATAAA	-15	NA	102865956	103029713	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_102866285_102867272_102867394_102895850_102895963_102901355_102901414_102913933_102914022_102924956_102925043_102926584_102926669_102946836_102946886_102948377_102948446_102949536_102949618_102949901_102949979_102950716_102950821_102959874_102960060_102961157_102961230_102990271_102990402_103003032_103003150_103005153_103005227_103006800_103007012_103007456_103007658_103009750_103009867_103017333_103017434_103019789_103019844_103028181_103028239_103028886
H1_mix_00073132	chr5	+	633	1	FSM	ENSG00000175749.11	ENST00000513279.1	656	1	11	12	11	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCCAGTAACTGCAGGT	3016	False	NA	NA	False	NA	NA	NA	103032386	103033019	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_103032400_103033000
H1_mix_00073133	chr5	+	5497	29	NIC	ENSG00000145725.20	novel	15407	30	NA	NA	-44	-27	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	38.6368988012702	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACTTAAATGGTAAATTT	2	True	NA	17	True	ATTAAA	-18	NA	103120345	103203209	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_103120489_103129305_103129704_103133452_103133649_103136731_103136823_103138383_103138470_103146526_103146682_103147930_103148033_103149151_103149314_103151252_103151375_103152647_103152750_103153847_103153935_103154669_103154746_103154833_103154944_103155908_103155995_103158187_103158314_103158451_103158574_103159145_103159329_103167178_103167321_103168071_103168296_103173154_103173283_103173857_103173973_103177666_103177775_103177863_103177981_103180020_103180189_103184671_103184745_103186319_103186440_103190841_103190983_103194899_103195026_103201521
H1_mix_00073134	chr5	+	5500	29	NIC	ENSG00000145725.20	novel	15407	30	NA	NA	5	-29	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	40.3217923556916	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGACTTAAATGGTAAAT	8	True	NA	15	True	ATTAAA	-16	NA	103120394	103203207	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_103120489_103129305_103129704_103133452_103133649_103136731_103136823_103138383_103138470_103146526_103146682_103147930_103148033_103149151_103149314_103151252_103151375_103152647_103152750_103153847_103153935_103154669_103154746_103154833_103154944_103155908_103155995_103158187_103158314_103158451_103158574_103159145_103159329_103167178_103167321_103168071_103168296_103173154_103173283_103173857_103173973_103177666_103177775_103177863_103177981_103180020_103180189_103183233_103183408_103184671_103184745_103190841_103190983_103194899_103195026_103201521
H1_mix_00073135	chr5	+	5383	18	NNC	ENSG00000145725.20	novel	15369	31	NA	NA	-13435	0	intron_retention	FALSE	canonical	3	27	junction_12	51.4778818361741	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTATCTCTTACTTTTT	NA	False	NA	44	True	ATTAAA	-45	NA	103154752	103203236	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_103154944_103155908_103155995_103158187_103158314_103158454_103158574_103159145_103159329_103167178_103167321_103168071_103168296_103173154_103173283_103173857_103173973_103177666_103177775_103177863_103177981_103180020_103180189_103183233_103184745_103186319_103186440_103187313_103187377_103190841_103190983_103194899_103195026_103201521
H1_mix_00073141	chr5	+	657	2	Antisense	novelGene_ENSG00000251027.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_1	0	57	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	7	True	NA	10	True	AATAAA	-16	NA	106978948	106984044	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr5_+_106979187_106983625
H1_mix_00073142	chr5	+	11844	21	NNC	ENSG00000151422.14	novel	3132	18	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	8.7021549055392	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCCTTGTCTTATTTAA	11	True	NA	9	True	AATAAA	-21	NA	108748965	109196841	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_108748994_108768092_108768239_108798123_108798390_108832769_108832944_108835707_108835808_108867766_108867951_108871364_108871503_108872092_108872213_108883395_108883519_108897658_108897849_108946129_108946223_108954728_108954933_108959224_108959348_109037421_109037479_109044679_109044796_109047103_109047199_109100395_109100520_109180746_109180902_109186199_109186323_109187432_109188172_109188295
H1_mix_00073144	chr5	+	505	4	FSM	ENSG00000134982.17	ENST00000509732.5	524	4	19	0	-4	0	multi-exon	FALSE	canonical	2	7	junction_1	24.9977776790036	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAGAAGAGGGTTTGTAAA	8	True	NA	NA	False	NA	NA	NA	112707516	112767322	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_112707650_112754872_112755026_112766325_112766411_112767188
H1_mix_00073145	chr5	+	10878	17	NNC	ENSG00000134982.17	novel	3602	14	NA	NA	-4	98	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_9	14.6829780272941	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAGAGATGGATGTTAG	8	True	NA	NA	False	NA	NA	NA	112707516	112846337	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_112707883_112754872_112755026_112766325_112766411_112767188_112767391_112775628_112775738_112780789_112780904_112792445_112792530_112801278_112801384_112815494_112815594_112819268_112819345_112821895_112821992_112823306_112823361_112827107_112827248_112827928_112828007_112828855_112828973_112834950_112835166_112837552
H1_mix_00073146	chr5	+	1270	4	FSM	ENSG00000153037.15	ENST00000621420.5	1270	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	739.573901348307	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTTTGTTTGTTTGTTTG	18	True	NA	1	True	AGTAAA	-13	NA	112861324	112868392	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_112861418_112862507_112862584_112864620_112864733_112867403
H1_mix_00073148	chr5	+	1030	1	FSM	ENSG00000250444.1	ENST00000502314.1	1618	1	169	419	169	-419	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCACGATGCTTTGTGTG	NA	False	NA	NA	False	NA	NA	NA	115512245	115513275	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_115512200_115513300
H1_mix_00073149	chr5	+	5126	1	NIC	ENSG00000145781.9	novel	842	6	NA	NA	10818	1477	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTCGTTTCTGTCTTTT	11	False	NA	NA	False	AATAAA	-10	NA	116303274	116308400	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_116303300_116308400
H1_mix_00073150	chr5	+	567	2	FSM	ENSG00000172869.15	ENST00000504031.1	569	2	2	0	2	0	multi-exon	FALSE	canonical	3	83	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTAGGTGTCCTTTGTT	NA	False	NA	NA	False	NA	NA	NA	119129210	119133485	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_119129424_119133131
H1_mix_00073151	chr5	+	2129	3	FSM	ENSG00000145779.8	ENST00000503646.1	2502	3	373	0	-167	0	multi-exon	FALSE	canonical	0	0	junction_1	6.5	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCTATGATTTTTTT	355	False	NA	3	True	AATAAA	-14	NA	119355145	119394598	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_119355393_119356022_119356122_119392815
H1_mix_00073152	chr5	+	2780	24	FSM	ENSG00000133835.18	ENST00000646058.1	2780	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	270.940698315666	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCCAGTCTTACTTCTGA	-15	True	NA	NA	False	AATAAA	-3	NA	119452508	119585006	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_119452634_119456314_119456369_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119584414
H1_mix_00073153	chr5	+	4332	24	FSM	ENSG00000133835.18	ENST00000644146.1	4322	24	-10	0	0	0	multi-exon	FALSE	canonical	1	6	junction_7	369.430819551892	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATAAGTTGAAAGGAAAAT	11	True	NA	-25	True	AATAAA	-44	NA	119452534	119542284	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_119452634_119456314_119456369_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119477797_119477895_119478833_119479022_119489191_119489284_119492099_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
H1_mix_00073154	chr5	+	2743	25	FSM	ENSG00000133835.18	ENST00000646355.1	2743	25	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	411.476271760866	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCTTTGATACCTTTGTT	100	False	NA	6	True	ATTAAA	-8	NA	119452671	119542315	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_119452822_119456314_119456369_119472457_119472577_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
H1_mix_00073155	chr5	+	1596	3	FSM	ENSG00000184838.15	ENST00000446965.2	1152	3	-42	-402	-42	-5	multi-exon	FALSE	canonical	0	0	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATGAAGTAGTGGTTCA	29	False	NA	NA	False	AATAAA	-40	NA	120617094	120687327	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_120617193_120618441_120618566_120685953
H1_mix_00073156	chr5	+	1900	4	NNC	ENSG00000248927.1	novel	1114	2	NA	NA	1302	809	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0.471404520791032	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTATCTATCTATCTATC	NA	False	NA	NA	False	NA	NA	NA	120782519	120791587	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_120782600_120787642_120787764_120788196_120788262_120789953
H1_mix_00073157	chr5	+	603	1	FSM	ENSG00000213661.3	ENST00000466718.1	561	1	10	-52	10	52	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAAATTAAGAAAT	NA	False	NA	NA	False	ATTAAA	-22	NA	121616256	121616859	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_121616300_121616900
H1_mix_00073158	chr5	+	3393	9	NNC	ENSG00000151304.6	novel	2855	8	NA	NA	0	9538	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	34.4954707171826	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGAGTTTGGAATTTTTT	-29	True	NA	8	True	AATAAA	-20	NA	121961974	122038171	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_121962069_121974195_121974285_121975314_121975388_121994598_121994671_122019259_122019342_122020087_122020803_122022369_122022408_122026941_122028162_122037161
H1_mix_00073159	chr5	+	1927	2	FSM	ENSG00000164185.6	ENST00000296600.5	1929	2	0	2	0	-2	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACATGGTCTGTAAATAC	-8	True	NA	NA	False	ATTAAA	-21	NA	122129545	122153567	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_122129684_122151778
H1_mix_00073160	chr5	+	3482	12	NIC	ENSG00000064692.20	novel	3126	13	NA	NA	-118	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	19.8165136912635	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCCACCTATAAGCTTGG	NA	False	NA	9	True	AATAAA	-10	NA	122311572	122464048	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_122311626_122391088_122391192_122403792_122403866_122422867_122423740_122425351_122425532_122431968_122432083_122440628_122440755_122444562_122444733_122449844_122449938_122450532_122451602_122452924_122452996_122463490
H1_mix_00073161	chr5	+	3433	11	NIC	ENSG00000064692.20	novel	3126	13	NA	NA	4	3	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	17.9412931529475	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGCTTGGGGCACCTAC	14	False	NA	18	True	AATAAA	-19	NA	122311772	122464057	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_122311839_122391088_122391192_122403792_122403866_122422867_122423740_122425351_122425532_122431968_122432083_122440628_122440755_122444562_122444733_122449844_122449938_122450532_122451602_122463490
H1_mix_00073162	chr5	+	2546	10	FSM	ENSG00000064692.20	ENST00000512385.5	2564	10	0	18	0	3	multi-exon	FALSE	canonical	1	1	junction_3	20.7548893540478	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGCTTGGGGCACCTAC	219	False	NA	18	True	AATAAA	-19	NA	122312124	122464057	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_122312285_122391088_122391192_122403792_122403866_122431968_122432083_122440628_122440755_122444562_122444733_122449844_122449938_122450532_122451602_122452924_122452996_122463490
H1_mix_00073163	chr5	+	1166	7	NNC	ENSG00000064652.11	novel	1563	7	NA	NA	-317	52	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_2	54.4507932806207	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTCTCTCTTACCAGAC	909	False	NA	60	True	GGGGCT	-26	NA	122845200	123002197	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_122845694_122866194_122866293_122936733_122936818_122946054_122946160_122999911_123000007_123001404_123001438_123001939
H1_mix_00073164	chr5	+	4635	13	FSM	ENSG00000151292.17	ENST00000345990.8	4635	13	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_12	65.576079649688	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAATTAAGGGAAATAGCA	-1	True	NA	NA	False	ATTAAA	-12	NA	123512098	123617040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_123512571_123545416_123545842_123553106_123553148_123557494_123557565_123573392_123573542_123575728_123575964_123588067_123588154_123588426_123588512_123590412_123590559_123591318_123591415_123604723_123604831_123605338_123605363_123614341
H1_mix_00073165	chr5	+	786	3	Intergenic	novelGene_1196	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAAACCATCTGCGAACC	9	False	NA	NA	False	AATAAA	-18	NA	124962980	124973242	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_124963205_124972527_124972649_124972801
H1_mix_00073166	chr5	+	5778	2	Intergenic	novelGene_1199	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	227	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGGAGATAAGGGTGGGG	NA	False	NA	NA	False	NA	NA	NA	126839369	126845359	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_126844240_126844451
H1_mix_00073167	chr5	+	5974	1	Intergenic	novelGene_1201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGAGTCAGCGAAGGGA	NA	False	NA	NA	False	NA	NA	NA	126839372	126845346	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_126839400_126845300
H1_mix_00073169	chr5	+	222	1	FSM	ENSG00000271766.1	ENST00000607594.1	443	1	199	22	199	-22	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAATAAATGGCAATCAAC	NA	False	NA	NA	False	NA	NA	NA	127478493	127478715	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_127478500_127478700
H1_mix_00073170	chr5	+	2566	11	NNC	ENSG00000113396.13	novel	2616	11	NA	NA	12	0	at_least_one_novel_splicesite	TRUE	canonical	2	6	junction_1	12.1675798744039	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTATTTTTATGTATCC	-16	True	NA	15	True	AATAAA	-20	NA	128965499	129033635	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_128965693_128965977_128966619_128985132_128985337_128988599_128988759_128990339_128990465_129015884_129016080_129023619_129023711_129027132_129027332_129028344_129028443_129029576_129029708_129033105
H1_mix_00073171	chr5	+	2616	11	FSM	ENSG00000113396.13	ENST00000395266.5	2616	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13.6194713553794	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATGTATCCTGTCTTA	1	True	NA	22	True	AATAAA	-27	NA	128965516	129033642	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_128965753_128965977_128966619_128985132_128985337_128988599_128988759_128990339_128990465_129015884_129016080_129023619_129023711_129027132_129027332_129028344_129028443_129029576_129029708_129033105
H1_mix_00073173	chr5	+	2560	6	FSM	ENSG00000205089.8	ENST00000614847.1	2642	6	-23	105	-4	-105	multi-exon	FALSE	canonical	1	2	junction_5	1.35646599662505	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCATGCTGCTCACAGCT	-2	True	NA	NA	False	NA	NA	NA	132747421	132754298	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_132747925_132748346_132748476_132749347_132749423_132750856_132750998_132751917_132752197_132752865
H1_mix_00073174	chr5	+	419	3	NNC	ENSG00000164405.11	novel	429	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	2216	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACTGTTGTGATATTACA	-17	True	NA	9	True	AATAAA	-13	NA	132866629	132867683	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_132866688_132866868_132867036_132867489
H1_mix_00073175	chr5	+	402	3	NNC	ENSG00000164405.11	novel	1573	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	2221	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTGTGATATTACATTTT	10	True	NA	13	True	AATAAA	-17	NA	132866656	132867687	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_132866688_132866868_132867040_132867487
H1_mix_00073176	chr5	+	4644	10	ISM	ENSG00000081059.20	ENST00000395029.5	3330	11	40	0	40	0	intron_retention	FALSE	canonical	3	32	junction_3	9.13411729536205	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTTTCAAAGCCTGAC	38	True	NA	2	True	AATAAA	-17	NA	134114751	134148210	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_134115156_134115320_134115388_134115908_134116034_134138058_134138165_134138950_134139039_134142184_134142305_134142720_134142884_134142992_134143101_134143591_134143641_134144796
H1_mix_00073177	chr5	+	415	4	FSM	ENSG00000119048.8	ENST00000510021.5	415	4	0	0	0	0	multi-exon	TRUE	canonical	1	5	junction_2	108.02880274363	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATATGAGAAAAGAGTTT	9	True	NA	NA	False	AAAACA	-5	NA	134371468	134390298	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_134371640_134374382_134374464_134388324_134388414_134390224
H1_mix_00073179	chr5	+	5350	2	FSM	ENSG00000164615.6	ENST00000677966.1	5350	2	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCCAAGTAGCTGGGATT	1192	False	NA	NA	False	NA	NA	NA	134739743	134751799	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_134744053_134750758
H1_mix_00073180	chr5	+	623	4	FSM	ENSG00000164616.16	ENST00000475169.1	611	4	-12	0	6	0	multi-exon	FALSE	canonical	1	1	junction_1	1.69967317119759	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGTTTGAATTTGAACT	-22	True	NA	NA	False	AATGAA	-25	NA	135930323	135936840	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_135930481_135934350_135934450_135935319_135935440_135936593
H1_mix_00073181	chr5	+	1479	3	FSM	ENSG00000164616.16	ENST00000478939.1	1479	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAGATTCTGAAATTGTT	6449	False	NA	NA	False	NA	NA	NA	135936794	135941678	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_135936961_135937424_135937548_135940488
H1_mix_00073182	chr5	+	7023	9	NIC	ENSG00000113658.18	novel	7013	8	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	96.7670366137147	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAATGTGTCTTTTTTTGT	39	True	NA	19	True	AATAAA	-13	NA	136132918	136182733	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_136132963_136147831_136147907_136152674_136152759_136153591_136154164_136160855_136161108_136163271_136163392_136172433_136172656_136174375_136174633_136177336
H1_mix_00073183	chr5	+	476	1	Intergenic	novelGene_1207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGAGTATTGTCTAAGTT	NA	False	NA	NA	False	AAAAAG	-9	NA	136567891	136568367	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_136567900_136568400
H1_mix_00073184	chr5	+	325	2	FSM	ENSG00000246323.2	ENST00000500267.2	1253	2	101	827	101	-827	multi-exon	FALSE	canonical	1	1	junction_1	0	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCAGCCTGTGGGAGTCAG	NA	False	NA	NA	False	AAAACA	-3	NA	138032874	138036439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_138032953_138036192
H1_mix_00073185	chr5	+	1456	5	FSM	ENSG00000061492.12	ENST00000506684.6	1673	5	217	0	165	0	multi-exon	FALSE	canonical	0	0	junction_3	2.95803989154981	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAGACCACATATCTGCC	214	False	NA	NA	False	GATAAA	-5	NA	138084249	138091541	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_138084284_138084497_138084637_138087805_138087932_138088926_138089070_138090527
H1_mix_00073187	chr5	+	5826	8	NIC	ENSG00000120709.11	novel	4143	5	NA	NA	-13	0	intron_retention	FALSE	canonical	3	10	junction_3	52.9042261341865	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTGTACTACAGTGTCT	NA	False	NA	30	True	AATAAA	-33	NA	138332091	138349729	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_138332186_138333432_138333529_138335384_138335486_138336873_138338308_138341183_138341414_138341808_138341867_138344824_138345610_138346701
H1_mix_00073188	chr5	+	7486	4	NIC	ENSG00000120709.11	novel	4143	5	NA	NA	-216	0	intron_retention	FALSE	canonical	3	95	junction_3	20.3960780543711	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTGTACTACAGTGTCT	200	False	NA	30	True	AATAAA	-33	NA	138337798	138349729	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_138341414_138341808_138341867_138344824_138345610_138346701
H1_mix_00073190	chr5	+	1181	2	NNC	ENSG00000044115.21	novel	224	2	NA	NA	6288	973	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTCTTGAAAGTGTCTTA	7178	False	NA	NA	False	ATTAAA	-27	NA	138760656	138763071	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_138760707_138761940
H1_mix_00073191	chr5	+	3260	17	FSM	ENSG00000280987.4	ENST00000509990.5	3249	17	-11	0	-11	0	multi-exon	FALSE	canonical	3	12	junction_2	1019.7032177765	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGATTTAATGATTTCAAA	NA	False	NA	NA	False	NA	NA	NA	139273740	139329404	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_139274162_139276120_139276151_139279050_139279130_139307238_139308328_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
H1_mix_00073192	chr5	+	5515	19	FSM	ENSG00000280987.4	ENST00000394800.6	5513	19	-2	0	-1	0	multi-exon	FALSE	canonical	0	0	junction_5	1182.99647265788	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGAGTTTGTTTTACAGT	-14	True	NA	6	True	AATGAA	-14	NA	139274101	139331671	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139293452_139293576_139307238_139308328_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325295_139325663_139326162_139326285_139329344
H1_mix_00073193	chr5	+	2670	13	FSM	ENSG00000015479.20	ENST00000502499.5	2664	13	-6	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	802.967149424904	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAATTGGTTATACATGT	2	True	NA	16	True	AATAAA	-18	NA	139293715	139330405	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_139293806_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
H1_mix_00073194	chr5	+	818	3	FSM	ENSG00000120727.13	ENST00000510409.1	815	3	-3	0	0	0	multi-exon	FALSE	canonical	3	3987	junction_2	220	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGATTGCACCATTGCAC	-6	True	NA	NA	False	NA	NA	NA	139341853	139365090	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_139341981_139363758_139363923_139364563
H1_mix_00073195	chr5	+	11511	1	FSM	ENSG00000185129.8	ENST00000331327.5	11511	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGCCTTACAACTTTGC	2	True	NA	NA	False	NA	NA	NA	140114108	140125619	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140114100_140125600
H1_mix_00073197	chr5	+	3534	10	Fusion	ENSG00000131503.21_ENSG00000243056.2	novel	4079	13	NA	NA	2	-2	multi-exon	FALSE	canonical	3	22	junction_4	65.0989749781813	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCTTGGCTCCAGTGTT	NA	False	NA	6	True	AGTAAA	-11	NA	140526034	140549574	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr5_+_140526444_140526927_140527075_140527872_140528023_140528183_140529797_140537337_140537590_140538085_140538262_140538918_140539084_140542171_140542282_140548905_140549077_140549233
H1_mix_00073198	chr5	+	2225	8	ISM	ENSG00000254996.5	ENST00000532219.5	8246	36	127007	-7	1	7	3prime_fragment	FALSE	canonical	3	42	junction_2	55.3065667577604	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGGCTCCAGTGTTCT	726	False	NA	8	True	AGTAAA	-13	NA	140528914	140549576	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_+_140529797_140535361_140535539_140537388_140537590_140538085_140538262_140538918_140539084_140542171_140542282_140548905_140549077_140549233
H1_mix_00073199	chr5	+	2774	3	FSM	ENSG00000176087.16	ENST00000612662.2	2789	3	15	0	6	0	multi-exon	FALSE	canonical	3	9	junction_1	368.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCACAGCCATGATTGTCT	8	True	NA	8	True	AATAAA	-29	NA	140564833	140569089	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140564859_140565747_140565972_140566564
H1_mix_00073200	chr5	+	521	1	FSM	ENSG00000251453.1	ENST00000505275.1	832	1	505	-194	505	194	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGCTTTTCTTTCTCTCT	NA	False	NA	NA	False	AATACA	-16	NA	140582008	140582529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140582000_140582500
H1_mix_00073201	chr5	+	1451	6	FSM	ENSG00000112855.17	ENST00000510104.5	1450	6	-1	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	51.1796834691267	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGAGTCATGCTATACAG	-35	True	NA	NA	False	NA	NA	NA	140691429	140696344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140691757_140693490_140693666_140693934_140694055_140694184_140694281_140695507_140695634_140695737
H1_mix_00073202	chr5	+	2386	15	FSM	ENSG00000112855.17	ENST00000645065.1	2363	15	-23	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	51.7892117045586	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGGATAACATGTTAAATA	-35	True	NA	-22	True	NA	NA	NA	140691429	140699271	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140691516_140691606_140691757_140693490_140693509_140693590_140693666_140693934_140694055_140694184_140694281_140695507_140695634_140695737_140695846_140696102_140696202_140696520_140696615_140696942_140697071_140697163_140697407_140697568_140697686_140697931_140698079_140698492
H1_mix_00073203	chr5	+	2257	13	FSM	ENSG00000112855.17	ENST00000642452.1	2257	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	42.3664568575975	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGAGGCTGTTTTAGAA	19	False	NA	-45	True	NA	NA	NA	140691682	140699248	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140691757_140693590_140693666_140693934_140694055_140694184_140694281_140695507_140695634_140695737_140695846_140696028_140696202_140696520_140696615_140696942_140697071_140697163_140697407_140697568_140697686_140697931_140698079_140698492
H1_mix_00073204	chr5	+	3152	1	FSM	ENSG00000255408.4	ENST00000532566.3	4594	1	15	1427	-14	-1427	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAATTTGGCAATACCGTT	6189	False	NA	NA	False	NA	NA	NA	140801042	140804194	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140801000_140804200
H1_mix_00073205	chr5	+	2948	1	FSM	ENSG00000204963.6	ENST00000356878.5	2922	1	-37	11	-37	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTGTCAAAATCATCTGT	6243	False	NA	NA	False	TATAAA	-6	NA	140834210	140837158	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140834200_140837200
H1_mix_00073206	chr5	+	13060	1	FSM	ENSG00000250120.8	ENST00000562220.2	12358	1	14	-716	0	716	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACAAAGGAACTCCATCAT	-24	True	NA	NA	False	TTTAAA	-28	NA	140855896	140868956	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140855900_140869000
H1_mix_00073208	chr5	+	4704	5	FSM	ENSG00000239389.8	ENST00000409494.5	4884	5	180	0	119	0	multi-exon	FALSE	canonical	0	0	junction_1	63.9702079096199	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATGGTGGTCATTTC	262	False	NA	NA	False	AATAAA	-17	NA	140882387	141012344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140884663_140978948_140979008_140982474_140982564_141009626_141009729_141010165
H1_mix_00073210	chr5	+	5896	4	FSM	ENSG00000248383.5	ENST00000253807.3	5896	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	67.4306227828936	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGGTGGTCATTTCTAA	NA	False	NA	NA	False	AATAAA	-20	NA	140926298	141012347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_140929326_140978948_140979008_140982474_140982564_141009626
H1_mix_00073211	chr5	+	4447	5	NIC	ENSG00000243232.6	novel	5725	4	NA	NA	64	-468	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	55.2924045416728	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTAAATCAAGATACTGGT	12	False	NA	7	True	AGTAAA	-8	NA	140966539	141011570	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_140969332_140978948_140979008_140982474_140982564_141009626_141009729_141010165
H1_mix_00073212	chr5	+	3719	1	FSM	ENSG00000113209.9	ENST00000231134.8	3410	1	4	-313	4	313	mono-exon	FALSE	NA	NA	NA	NA	NA	316	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCCAGTGGTTGTACTAA	-25	True	NA	NA	False	NA	NA	NA	141135209	141138928	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141135200_141138900
H1_mix_00073213	chr5	+	1411	1	FSM	ENSG00000113211.6	ENST00000231136.4	3231	1	1515	305	1470	68	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACTGTTTAAAATGTGAG	699	False	NA	NA	False	NA	NA	NA	141151571	141152982	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141151600_141153000
H1_mix_00073214	chr5	+	790	1	FSM	ENSG00000197479.7	ENST00000354757.5	4153	1	-29	3392	-12	-1892	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGGAGCTCAGTTTCATC	-15	True	NA	NA	False	NA	NA	NA	141199597	141200387	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141199600_141200400
H1_mix_00073215	chr5	+	2093	2	FSM	ENSG00000120328.6	ENST00000622978.1	2093	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	798	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCTTTCCATTGTTTTC	-1	True	NA	NA	False	TATAAA	-37	NA	141208718	141211559	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141209073_141209820
H1_mix_00073216	chr5	+	287	1	FSM	ENSG00000187372.11	ENST00000341948.6	5061	1	-21	4795	-21	-4795	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTATCTCTGGCGGGC	5155	False	NA	NA	False	NA	NA	NA	141213897	141214184	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141213900_141214200
H1_mix_00073217	chr5	+	3176	1	FSM	ENSG00000272070.2	ENST00000691212.1	3119	1	12	-69	4	66	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTGGCCGAATTTGTTC	9	True	NA	NA	False	NA	NA	NA	141326253	141329429	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141326300_141329400
H1_mix_00073219	chr5	+	4782	4	FSM	ENSG00000253767.3	ENST00000398604.3	4782	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	101.72839655999	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACGTTTCTGTATAAG	5	True	NA	24	True	AATAAA	-17	NA	141392632	141512975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141395238_141494806_141494866_141505392_141505482_141510946
H1_mix_00073220	chr5	+	1040	1	FSM	ENSG00000240764.4	ENST00000610789.1	2763	1	1318	405	1318	-405	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGCTGCGGCCCACAGAC	1329	False	NA	NA	False	NA	NA	NA	141490484	141491524	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141490500_141491500
H1_mix_00073223	chr5	+	411	1	FSM	ENSG00000271871.1	ENST00000607378.1	957	1	463	83	463	-83	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGCATATTAATGAGACCC	NA	False	NA	NA	False	AGTAAA	-4	NA	141952881	141953292	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_141952900_141953300
H1_mix_00073224	chr5	+	3050	9	NIC	ENSG00000013561.18	novel	815	5	NA	NA	26	-2	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	42.1211051611897	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAACAGAGTTGCTGCTA	17	False	NA	18	True	AATAAA	-26	NA	141969182	141989183	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_141969235_141970703_141970878_141973582_141973743_141974803_141974956_141978302_141978831_141980122_141980352_141983379_141983553_141984802_141984934_141987732
H1_mix_00073225	chr5	+	2806	6	Fusion	ENSG00000236714.3_ENSG00000231185.8	novel	1312	5	NA	NA	0	0	multi-exon	FALSE	canonical	1	4	junction_1	8.86791971095815	32	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGTGTCTATAAATTTT	NA	False	NA	6	True	CATAAA	-19	NA	142581847	142760998	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr5_+_142581915_142703380_142703491_142745207_142745719_142756733_142756831_142757826_142757935_142759085
H1_mix_00073226	chr5	+	1637	6	FSM	ENSG00000236714.3	ENST00000660053.1	1621	6	-16	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	11.0742945599257	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGAACTTTGGGGTATT	NA	False	NA	NA	False	AATAAA	-30	NA	142716228	142759749	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_142716335_142718115_142718267_142745207_142745719_142756733_142756831_142757826_142757935_142759085
H1_mix_00073229	chr5	+	3647	23	NIC	ENSG00000145819.18	novel	9395	23	NA	NA	12	334	intron_retention	FALSE	canonical	0	0	junction_22	25.5869930800013	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGAAAGTGCACGTGTGT	13	False	NA	2	True	ATTAAA	-12	NA	142770388	143217104	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_142770916_142873399_142873496_142875109_142875172_142879373_142879446_142885297_142885400_142894237_142894349_142901934_142902040_142903539_142903670_142907703_142907805_142913198_142913294_142932046_142932126_143014079_143014117_143037195_143037262_143041815_143041891_143054438_143054527_143056027_143056087_143057641_143057748_143120987_143121148_143133966_143134106_143147230_143147382_143207197_143207474_143213996_143214089_143216186
H1_mix_00073231	chr5	+	3426	23	NIC	ENSG00000145819.18	novel	9226	23	NA	NA	68	334	combination_of_known_junctions	FALSE	canonical	0	0	junction_22	24.1610043713295	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGAAAGTGCACGTGTGT	32	False	NA	2	True	ATTAAA	-12	NA	142770444	143217104	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_142770916_142873399_142873496_142875109_142875172_142879373_142879446_142885297_142885400_142894237_142894349_142901934_142902040_142903539_142903670_142907703_142907805_142913198_142913294_142932046_142932126_143014079_143014117_143037195_143037262_143041815_143041891_143054438_143054527_143056027_143056087_143057641_143057748_143120987_143121148_143133966_143134106_143147230_143147382_143207197_143207309_143213996_143214089_143216186
H1_mix_00073233	chr5	+	6362	20	NIC	ENSG00000091009.8	novel	6537	21	NA	NA	10	0	combination_of_known_splicesites	TRUE	canonical	3	15	junction_8	9.91459373726777	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGTAATTCTGGCTTGT	9	True	NA	17	True	NA	NA	NA	146203614	146289223	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_146203825_146218984_146219104_146223402_146223528_146228945_146229038_146229716_146229911_146230656_146230918_146233449_146233744_146237297_146237433_146254942_146255093_146258448_146258594_146260744_146260899_146261509_146261807_146263490_146263632_146267648_146267769_146269206_146269282_146269419_146269585_146270953_146271059_146271482_146271675_146284621_146284733_146285946
H1_mix_00073234	chr5	+	2584	17	NIC	ENSG00000113649.13	novel	4684	23	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	102	junction_12	221.626365971538	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACTGTTGTGTTTACTTG	NA	False	NA	NA	False	NA	NA	NA	146447300	146503539	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_146447409_146455055_146455282_146457182_146457336_146458883_146459338_146463550_146463794_146469543_146469745_146470635_146470749_146471487_146471577_146478492_146478654_146479854_146479912_146480027_146480095_146481149_146481201_146482591_146482728_146483539_146483630_146492919_146493039_146498535_146498687_146503374
H1_mix_00073236	chr5	+	2428	4	NNC	ENSG00000286468.1	novel	2387	3	NA	NA	-50967	0	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_2	23.4710223230453	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTCAATAAAATGGGTTAA	18	False	NA	NA	False	NA	NA	NA	147042291	147097240	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_147042377_147093302_147093462_147093948_147094057_147095164
H1_mix_00073239	chr5	+	1920	4	FSM	ENSG00000280780.3	ENST00000626945.2	1920	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	81.3442615609048	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTATTGAGCATCCGTCT	-1	True	NA	5	True	AATAAA	-16	NA	147559993	147662009	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_147560138_147594359_147594478_147595439_147595541_147660452
H1_mix_00073240	chr5	+	888	7	FSM	ENSG00000280780.3	ENST00000686563.1	844	7	3	-47	3	47	multi-exon	FALSE	canonical	3	3	junction_5	97.1882480321338	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGAAAGTATGCACATATG	2	True	NA	NA	False	ATTAAA	-22	NA	147559996	147694874	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_147560138_147594359_147594478_147595424_147595541_147636276_147636406_147667053_147667148_147683027_147683166_147694722
H1_mix_00073245	chr5	+	3657	21	FSM	ENSG00000145868.17	ENST00000296701.10	3680	21	23	0	0	0	multi-exon	FALSE	canonical	3	9	junction_14	22.8111266709911	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACTTTTCTCTTGCCTT	2	True	NA	12	True	AATAAA	-9	NA	148383957	148442827	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_148384040_148394713_148394905_148398998_148399133_148401981_148402146_148402347_148402514_148404684_148404823_148406256_148406395_148409123_148409218_148410634_148410766_148414135_148414307_148415927_148416071_148416993_148417205_148423997_148424118_148425521_148425702_148433423_148433525_148433634_148433738_148438331_148438499_148439646_148439793_148440423_148440528_148441123_148441238_148441968
H1_mix_00073255	chr5	+	3814	6	NNC	ENSG00000164591.14	novel	665	3	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28.1211664053965	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAGTAAAATGTGAAGTG	7757	False	NA	NA	False	AATAAA	-16	NA	150669082	150679363	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_150669177_150669946_150670639_150671596_150671651_150671754_150671909_150672339_150672503_150676706
H1_mix_00073259	chr5	+	10540	12	FSM	ENSG00000145907.16	ENST00000677323.1	10540	12	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	854.957076879176	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTATCTCTCTGTTGTCC	169	False	NA	NA	False	AATAAA	-28	NA	151772272	151812785	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_151772669_151786571_151786716_151790322_151790405_151790888_151791063_151794158_151794250_151795478_151795576_151797226_151797429_151799211_151799314_151799888_151800001_151800217_151800347_151800759_151800870_151803884
H1_mix_00073266	chr5	+	585	6	FSM	ENSG00000055163.20	ENST00000522637.5	580	6	-5	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	90.1829252131466	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGCTGCTGGCTGACATT	11	True	NA	NA	False	NA	NA	NA	157266122	157304274	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_157266196_157285338_157285479_157287018_157287075_157300714_157300897_157302793_157302891_157304237
H1_mix_00073283	chr5	+	4739	30	FSM	ENSG00000204764.14	ENST00000522066.5	4739	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	21.5566615034057	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCAGACTCATGTTTCT	3	True	NA	NA	False	AGTAAA	-26	NA	170862017	171300015	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_170862052_170878096_170878244_170881805_170881897_170892386_170892554_170896049_170896116_170909660_170909766_170910968_170911135_170914166_170914241_170916464_170916585_170918712_170918860_170919440_170919614_170924356_170924551_170953596_170953703_170968241_170968378_170983064_170983246_171028871_171028990_171170129_171170204_171171205_171171287_171183166_171183231_171183321_171183431_171199669_171199774_171205523_171205613_171213630_171213739_171221757_171221841_171240927_171241143_171242681_171242821_171265680_171265848_171293882_171293982_171295886_171296015_171298761
H1_mix_00073291	chr5	+	2733	18	FSM	ENSG00000160867.15	ENST00000393648.6	2733	18	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_9	134.488162095943	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGCGTCTTGACGGGAG	-4	True	NA	-88	True	NA	NA	NA	177086904	177098022	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_+_177087034_177089549_177089694_177090389_177090654_177090744_177090826_177090937_177091105_177091684_177091809_177092320_177092512_177092645_177092785_177093137_177093178_177093405_177093502_177093653_177093776_177095329_177095441_177095532_177095724_177096056_177096180_177096286_177096358_177096603_177096742_177097291_177097398_177097526
H1_mix_00073294	chr5	+	907	4	NIC	ENSG00000165671.22	novel	1706	7	NA	NA	3	-6	combination_of_known_junctions	FALSE	canonical	3	11	junction_3	65.2839949757979	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTATATCCCTGCTGTTC	-8	True	NA	NA	False	ATTAAA	-11	NA	177133775	177137398	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_177133953_177135086_177135201_177135940_177136031_177136872
H1_mix_00073303	chr5	+	2074	5	NNC	ENSG00000145911.6	novel	5985	5	NA	NA	218	-3690	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	86.9324450363614	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTCTACCAGAGGCTC	85	False	NA	4	True	AATAAA	-4	NA	178113749	178122391	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_178113772_178119556_178119914_178120177_178120700_178121097_178121353_178121473
H1_mix_00073304	chr5	+	5308	5	NNC	ENSG00000145911.6	novel	5985	5	NA	NA	6022	953	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_4	94.6757624738243	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCTACTGTCAATTTTA	983	False	NA	22	True	AATAAA	-25	NA	178119553	178127034	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_178119914_178120177_178120700_178121097_178121353_178121473_178122042_178123431
H1_mix_00073305	chr5	+	1738	10	NIC	ENSG00000145916.19	novel	3911	11	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	96.0302164380348	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTACTGCCCTTCTCATT	7	True	NA	53	True	NA	NA	NA	178131026	178148548	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_+_178131055_178138107_178138259_178142582_178142729_178142851_178142993_178143626_178143728_178143941_178144109_178146113_178146280_178147532_178147636_178147728_178147884_178147968
H1_mix_00073309	chr5	+	3262	13	NNC	ENSG00000176783.15	novel	2642	17	NA	NA	2534	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_3	95.6034561788084	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGGTGCGTGCAGAAGC	NA	False	NA	14	True	AATAAA	-15	NA	179579646	179610011	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_179581013_179585795_179585866_179586330_179586564_179589545_179589648_179591624_179591742_179593477_179593646_179594865_179594964_179596561_179596682_179598691_179598822_179601891_179601987_179605875_179605925_179607581_179607660_179609375
H1_mix_00073317	chr5	+	4915	9	NNC	ENSG00000238035.8	novel	992	8	NA	NA	4427	3506	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	19.5284247956664	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGATCAACGTGTTCTGTTC	NA	False	NA	NA	False	AATGAA	-12	NA	181310928	181328191	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_+_181311073_181313828_181313953_181317330_181317396_181320494_181320553_181320645_181320879_181321651_181321843_181323901_181323960_181324052_181326602_181326698
H1_mix_00073318	chr5	-	1658	2	Antisense	novelGene_ENSG00000286001.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGAGGGCGGAGCTCACGGC	9754	False	NA	NA	False	NA	NA	NA	261735	258894	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr5_-_260041_261223
H1_mix_00073321	chr5	-	2565	1	ISM	ENSG00000066230.12	ENST00000264938.8	5555	17	51375	54	9570	-52	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGTGCAAACTTTGTT	1	True	NA	0	True	ATTAAA	-15	NA	473074	470509	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_470500_473100
H1_mix_00073322	chr5	-	356	2	Intergenic	novelGene_1129	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCGAGTCCTGGAGAGCT	NA	False	NA	NA	False	NA	NA	NA	860702	860221	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_-_860419_860543
H1_mix_00073323	chr5	-	2720	16	NIC	ENSG00000028310.18	novel	2843	16	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	74.9647620923028	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTACTGAGTGCCCATTT	3	True	NA	-20	True	CATAAA	-17	NA	892796	863740	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_864569_865413_865582_870472_870576_871525_871565_876100_876213_878354_878488_879793_879890_881106_881183_883937_884071_886591_886768_887360_887472_889020_889166_889586_889648_891154_891288_891639_891855_892605
H1_mix_00073327	chr5	-	5293	24	NNC	ENSG00000113504.21	novel	5300	24	NA	NA	38	1	at_least_one_novel_splicesite	FALSE	non_canonical	2	2	junction_13	32.2290948641999	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGTTGAAGAATCTCTTGA	38	False	NA	-10	True	AATAAA	-18	NA	1112025	1050382	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_1052452_1053348_1053483_1057470_1057650_1060343_1060452_1063843_1063976_1064082_1064253_1065282_1065479_1073632_1073802_1074566_1074672_1075370_1075491_1076137_1076237_1076693_1076813_1077832_1078038_1078700_1078759_1079397_1079497_1081576_1081745_1083744_1083957_1085231_1085474_1086902_1087034_1088305_1088361_1088981_1089129_1093532_1093656_1094153_1094249_1111867
H1_mix_00073328	chr5	-	6896	13	NNC	ENSG00000164362.21	novel	5289	17	NA	NA	-5	0	intron_retention	FALSE	canonical	1	1	junction_5	19.1461847084188	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATGTTTGAATCCTAAT	-16	True	NA	-17	True	AGTAAA	-37	NA	1295073	1253166	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_1253832_1254367_1254506_1255286_1255412_1258597_1258660_1260473_1263182_1264403_1264593_1266463_1266536_1268519_1268634_1278640_1278797_1279290_1279471_1280157_1280339_1282428_1282625_1292963
H1_mix_00073329	chr5	-	2810	15	NIC	ENSG00000164362.21	novel	4039	16	NA	NA	-4	-17	combination_of_known_splicesites	FALSE	canonical	3	6	junction_2	15.7643682436833	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAGTTTTGAAAAAAATCT	6	True	NA	-34	True	AGTAAA	-20	NA	1295051	1253183	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_1253832_1254367_1254665_1255286_1255412_1258597_1258660_1260473_1260601_1264403_1264593_1266463_1266536_1268519_1268634_1271118_1271205_1272184_1272281_1278640_1278797_1279290_1279471_1280157_1280339_1282428_1282625_1294770
H1_mix_00073331	chr5	-	9623	3	NIC	ENSG00000185986.13	novel	1332	8	NA	NA	6861	0	intron_retention	FALSE	canonical	3	26	junction_2	24.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTTATTTCCAAATCC	8263	False	NA	NA	False	AATAAA	-17	NA	1586428	1571955	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_1574296_1576178_1576310_1579276
H1_mix_00073332	chr5	-	2228	8	FSM	ENSG00000188002.11	ENST00000512335.5	2231	8	3	0	1	0	multi-exon	FALSE	canonical	2	3	junction_3	45.4123960421129	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTTTTCTTTTTTTTTTT	4	True	NA	2	True	ATTAAA	-20	NA	1634001	1598919	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_1599270_1599626_1599828_1602690_1602736_1626785_1626927_1628754_1629631_1630408_1630567_1632643_1632907_1633807
H1_mix_00073333	chr5	-	4939	4	NNC	ENSG00000250579.3	novel	1684	4	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	27.1579740694249	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTCTTCTAATTTAAAA	-16	False	NA	-22	True	AATAAA	-21	NA	5140119	5132083	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_5133233_5133636_5133771_5133867_5134071_5136666
H1_mix_00073334	chr5	-	3550	13	FSM	ENSG00000037474.15	ENST00000505892.5	3558	13	8	0	8	0	multi-exon	FALSE	canonical	3	628	junction_5	63.6371550275466	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACATGTGTGATTCCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	6621481	6599240	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_6600233_6602460_6602501_6604137_6604277_6604604_6604686_6605272_6605409_6606819_6606913_6607199_6607385_6609825_6609923_6610954_6611086_6611724_6611799_6616726_6616858_6617949_6618025_6620105
H1_mix_00073337	chr5	-	633	3	FSM	ENSG00000112977.16	ENST00000510546.1	780	3	0	147	0	-147	multi-exon	FALSE	canonical	2	3	junction_1	268.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTAAGTACTTTTTATC	2	True	NA	NA	False	ATTAAA	-16	NA	10761199	10733918	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_10734269_10748174_10748272_10761013
H1_mix_00073338	chr5	-	4864	23	NIC	ENSG00000169862.20	novel	5888	22	NA	NA	2	-38	combination_of_known_junctions	FALSE	canonical	3	13	junction_8	12.7839646458411	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGAAAAGCGCGTTGT	-4	True	NA	NA	False	NA	NA	NA	11904444	10972932	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_10973714_10981772_10981847_10988110_10988243_10992550_10992678_11017973_11018059_11022768_11022980_11082695_11082847_11083880_11083956_11098574_11098749_11110857_11111044_11117449_11117568_11159575_11159760_11199447_11199662_11236690_11236824_11346371_11346628_11364695_11364891_11384664_11385230_11397030_11397204_11411535_11411653_11412034_11412070_11564943_11565057_11732135_11732273_11903816
H1_mix_00073339	chr5	-	5476	3	Antisense	novelGene_ENSG00000248131.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	50	junction_2	92	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAAGCAAAGGTTGTTCA	4	False	NA	NA	False	NA	NA	NA	12668006	12655704	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr5_-_12660808_12665722_12665825_12667735
H1_mix_00073340	chr5	-	7359	3	Antisense	novelGene_ENSG00000248131.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	117	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAAGCAAAGGTTGTTCA	4	False	NA	NA	False	NA	NA	NA	12668006	12655704	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr5_-_12656089_12656116_12660808_12665722
H1_mix_00073341	chr5	-	2283	5	FSM	ENSG00000039139.11	ENST00000683611.1	2844	5	248	313	248	-313	multi-exon	FALSE	canonical	0	0	junction_1	0	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTAGCTCTGGATCTG	NA	False	NA	NA	False	TATAAA	-3	NA	13714614	13690660	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_13692136_13700639_13700872_13701283_13701437_13708122_13708336_13714404
H1_mix_00073342	chr5	-	1593	1	FSM	ENSG00000250526.1	ENST00000507234.1	1593	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTGAAGCTTCCCCTCT	NA	False	NA	NA	False	NA	NA	NA	14641018	14639425	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_14639400_14641000
H1_mix_00073344	chr5	-	1730	7	NNC	ENSG00000173545.5	novel	1707	6	NA	NA	0	43825	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	122.014229589103	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAATTACAAAAAGAAAAAC	0	True	NA	NA	False	NA	NA	NA	16465800	16407693	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_16407717_16451518_16451785_16453012_16453157_16458516_16458630_16463107_16463271_16463481_16463743_16465040
H1_mix_00073345	chr5	-	7471	24	NNC	ENSG00000145555.15	novel	4839	23	NA	NA	-101	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	141.610531151752	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGTATTTGTGGATG	6268	False	NA	0	True	AATAAA	-17	NA	16738515	16661906	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_16663360_16665301_16666794_16668276_16668469_16670525_16670979_16671421_16671543_16672688_16672826_16673681_16673890_16674852_16675151_16676030_16676155_16679946_16680105_16681308_16681504_16681870_16682014_16683879_16683936_16685737_16685832_16689823_16689920_16694370_16694615_16699449_16699574_16700962_16701839_16702542_16702589_16702924_16703159_16704578_16704686_16710907_16711023_16711120_16711246_16738135
H1_mix_00073347	chr5	-	9089	23	NIC	ENSG00000145555.15	novel	4803	23	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_21	116.563544546978	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGTATTTGTGGATG	2885	False	NA	0	True	AATAAA	-17	NA	16741898	16661906	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_16666794_16668276_16668469_16670525_16670979_16671421_16671543_16672688_16672826_16673681_16673890_16674852_16675151_16676030_16676155_16679946_16680105_16681308_16681504_16681870_16682014_16683879_16683936_16685737_16685832_16689823_16689920_16694370_16694615_16699449_16699574_16700962_16701839_16702542_16702589_16702924_16703159_16704578_16704686_16710907_16711023_16711159_16711246_16741803
H1_mix_00073348	chr5	-	7549	24	NNC	ENSG00000145555.15	novel	4803	23	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	146.354529800737	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGTATTTGTGGATG	2523	False	NA	0	True	AATAAA	-17	NA	16742260	16661906	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_16663361_16665301_16666794_16668276_16668469_16670525_16670979_16671421_16671543_16672688_16672826_16673681_16673890_16674852_16675151_16676030_16676155_16679946_16680105_16681308_16681504_16681870_16682014_16683879_16683936_16685737_16685832_16689823_16689920_16694370_16694615_16699449_16699574_16700962_16701839_16702542_16702589_16702924_16703159_16704578_16704686_16710907_16711023_16711120_16711246_16741803
H1_mix_00073349	chr5	-	679	5	NNC	ENSG00000145555.15	novel	4839	23	NA	NA	626	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	196.591581711934	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACAGACAATTGCTGGCA	6995	False	NA	-30	True	NA	NA	NA	16737788	16703015	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_16703159_16704578_16704686_16710907_16711023_16711120_16711246_16737599
H1_mix_00073350	chr5	-	7220	3	Intergenic	novelGene_1149	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	42	junction_2	143.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAACTGGGCATAACTCA	50	False	NA	NA	False	NA	NA	NA	18674205	18653594	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_-_18658540_18664323_18664435_18672041
H1_mix_00073351	chr5	-	4759	13	FSM	ENSG00000145526.12	ENST00000382275.6	4793	13	20	14	5	-14	multi-exon	FALSE	canonical	0	0	junction_3	0.862006702732383	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTTTTACGACATTTTAG	20	True	NA	NA	False	AATAAA	-11	NA	19988180	19471309	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_19473717_19483300_19483553_19502991_19503110_19520656_19520779_19543868_19544006_19571578_19571833_19591056_19591245_19612433_19612602_19721346_19721467_19746941_19747237_19838758_19839243_19981059_19981179_19988085
H1_mix_00073353	chr5	-	25013	2	ISM	ENSG00000248605.5	ENST00000507887.5	638	3	2080	-3491	2062	3491	3prime_fragment	FALSE	canonical	3	127	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATATCTTTTGCCCACTT	786	False	NA	NA	False	CATAAA	-24	NA	25443845	25409947	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_25413845_25422729
H1_mix_00073354	chr5	-	3414	3	NNC	ENSG00000248605.5	novel	638	3	NA	NA	58	2892	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	48	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACTGTTTAAATACATCTT	NA	False	NA	NA	False	TATAAA	-28	NA	25445849	25410546	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_25413845_25422729_25422816_25445819
H1_mix_00073355	chr5	-	3983	3	NNC	ENSG00000248605.5	novel	638	3	NA	NA	3	2892	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	112	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACTGTTTAAATACATCTT	NA	False	NA	NA	False	TATAAA	-28	NA	25445904	25410546	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_25413845_25433611_25434212_25445819
H1_mix_00073357	chr5	-	556	3	ISM	ENSG00000113100.10	ENST00000505045.1	1801	6	-7	12769	-7	-22	5prime_fragment	FALSE	canonical	2	5	junction_2	2.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGTGCCAAGGCTATAGAC	19	False	NA	NA	False	AAGAAA	-32	NA	27038593	26915776	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_26915925_26988105_26988383_27038462
H1_mix_00073358	chr5	-	5371	34	NNC	ENSG00000113360.17	novel	5305	35	NA	NA	0	198	at_least_one_novel_splicesite	FALSE	canonical	3	99	junction_29	80.6694555900647	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCAATGAGGTGTTTGA	22	True	NA	NA	False	AATAAA	-20	NA	31532061	31400295	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_31401563_31405676_31405724_31406852_31406946_31409055_31409160_31409249_31409333_31410745_31410888_31421271_31421378_31422786_31422945_31424426_31424472_31429474_31429546_31431575_31431679_31435764_31435865_31437238_31437299_31448546_31448608_31449280_31449420_31451532_31451641_31464235_31464344_31466181_31466282_31467962_31468064_31472062_31472233_31483553_31483629_31484880_31484963_31486490_31486563_31493206_31493294_31495285_31495373_31504554_31504636_31508620_31508776_31511034_31511177_31514987_31515220_31521122_31521216_31526078_31526913_31529039_31529106_31530797_31530925_31531989
H1_mix_00073359	chr5	-	3682	32	NNC	ENSG00000113360.17	novel	5305	35	NA	NA	94	-4	at_least_one_novel_splicesite	FALSE	canonical	3	117	junction_18	73.2364920439904	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTGGAATAGATCCTG	5904	False	NA	NA	False	AATAAA	-16	NA	31526232	31401150	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_31401563_31405676_31405724_31406852_31406946_31409055_31409160_31409249_31409333_31410745_31410888_31421271_31421378_31422786_31422945_31424426_31424472_31429474_31429546_31431575_31431679_31435764_31435865_31437238_31437299_31448546_31448608_31449280_31449420_31451532_31451641_31464235_31464344_31466181_31466282_31467962_31468064_31472062_31472233_31483553_31483629_31484880_31484963_31486490_31486563_31493206_31493294_31495285_31495373_31504554_31504636_31508620_31508776_31511034_31511177_31514987_31515220_31515453_31515565_31521122_31521216_31526078
H1_mix_00073360	chr5	-	4966	15	FSM	ENSG00000150712.11	ENST00000280285.9	4966	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	88.0639841599416	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTTGGTATAACACATGG	6	True	NA	-20	True	ATTAAA	-31	NA	32312938	32226993	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_32230348_32234961_32235130_32239000_32239174_32242056_32242128_32243520_32243600_32248001_32248127_32248771_32248879_32255692_32255769_32263112_32263243_32268700_32268795_32270816_32270948_32271832_32271906_32273979_32274123_32276681_32276743_32312757
H1_mix_00073361	chr5	-	526	1	FSM	ENSG00000271874.1	ENST00000606491.1	432	1	-28	-66	-28	66	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTGTTCGGCTATGCAT	NA	False	NA	68	True	NA	NA	NA	34651916	34651390	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_34651400_34651900
H1_mix_00073363	chr5	-	214	2	FSM	ENSG00000164187.7	ENST00000503535.1	418	2	138	66	138	-66	multi-exon	FALSE	canonical	3	40	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTTACAGTAAATGATA	9313	False	NA	NA	False	NA	NA	NA	36142619	36141106	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_36141203_36142501
H1_mix_00073366	chr5	-	2177	4	Antisense	novelGene_ENSG00000164318.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	5	junction_1	20.8539897594894	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGAAATGTCAAGAGTCT	NA	False	NA	57	True	AATAAA	-18	NA	38341357	38302667	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr5_-_38304563_38316870_38317024_38325773_38325817_38341271
H1_mix_00073367	chr5	-	4922	3	Antisense	novelGene_ENSG00000164318.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	22	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTTTGGCTCAAAACCA	NA	False	NA	-22	True	GATAAA	-19	NA	38341357	38313170	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr5_-_38317964_38325773_38325817_38341271
H1_mix_00073369	chr5	-	6093	8	NIC	ENSG00000132356.12	novel	5254	9	NA	NA	4	-433	intron_retention	FALSE	canonical	3	133	junction_5	11.4606692115038	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTCTTGAGATGCTTT	258	False	NA	-11	True	AATAAA	-20	NA	40798155	40759821	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_40764641_40764751_40765239_40767465_40767691_40769415_40769504_40771718_40771864_40775409_40775504_40777444_40777587_40798062
H1_mix_00073370	chr5	-	1953	8	NIC	ENSG00000132356.12	novel	5254	9	NA	NA	0	383	combination_of_known_junctions	FALSE	canonical	3	5	junction_4	50.9533600261963	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCTTTATAGGTGATTTT	254	False	NA	NA	False	AATAAA	-20	NA	40798159	40762386	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_40763023_40764513_40764641_40764751_40765239_40767465_40767691_40771718_40771864_40775409_40775504_40777444_40777587_40798062
H1_mix_00073371	chr5	-	755	1	Antisense	novelGene_ENSG00000288911.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCCTGGCAGCCCCCGC	NA	False	NA	NA	False	NA	NA	NA	40799129	40798374	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr5_-_40798400_40799100
H1_mix_00073372	chr5	-	637	3	FSM	ENSG00000145592.14	ENST00000509877.5	637	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4239.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTAGTCACATAGAGCTT	5	True	NA	NA	False	NA	NA	NA	40835212	40832102	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_40832574_40834470_40834607_40835182
H1_mix_00073373	chr5	-	598	4	FSM	ENSG00000145592.14	ENST00000507642.5	425	4	-173	0	-173	0	multi-exon	FALSE	canonical	0	0	junction_2	5773.95883832459	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGGTAAGGTATTTTTA	871	False	NA	-23	True	AATAAA	-29	NA	40834780	40832447	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_40832574_40833960_40834038_40834180_40834266_40834470
H1_mix_00073376	chr5	-	1362	1	FSM	ENSG00000177738.5	ENST00000684959.1	1926	1	-910	1474	-78	-1474	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACACCATCCCTCTGCCCT	777	False	NA	NA	False	NA	NA	NA	43018889	43017527	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_43017500_43018900
H1_mix_00073377	chr5	-	555	1	FSM	ENSG00000177721.5	ENST00000616064.2	949	1	399	-5	399	5	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGGTTGTCAGTTTTTA	5	True	NA	NA	False	AATAAA	-23	NA	43039920	43039365	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_43039400_43039900
H1_mix_00073378	chr5	-	1597	5	NNC	ENSG00000151881.15	novel	2950	5	NA	NA	0	0	intron_retention	FALSE	canonical	2	5	junction_3	29.2435890410189	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTCCATTTCCTAATGAA	-30	True	NA	NA	False	AATATA	-9	NA	43483893	43445892	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_43446558_43453657_43454044_43476113_43476490_43479889_43479988_43483821
H1_mix_00073379	chr5	-	2572	12	NNC	ENSG00000172239.14	novel	2780	11	NA	NA	0	49758	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	419.995316778298	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGGCTTTTGTATCAGT	-15	True	NA	NA	False	NA	NA	NA	43557077	43476508	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_43476538_43526266_43527470_43529785_43529880_43533737_43533793_43534852_43534971_43535533_43535641_43536818_43536945_43538923_43539036_43543003_43543117_43547727_43547914_43555829_43556000_43556818
H1_mix_00073380	chr5	-	2783	12	NNC	ENSG00000172239.14	novel	2780	11	NA	NA	0	49758	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	379.404622755964	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGGCTTTTGTATCAGT	-15	True	NA	NA	False	NA	NA	NA	43557077	43476508	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_43476536_43526290_43527470_43529785_43529880_43533737_43533793_43534852_43534971_43535533_43535641_43536818_43536945_43538923_43539036_43543003_43543117_43547727_43547914_43555829_43556000_43556581
H1_mix_00073381	chr5	-	467	1	FSM	ENSG00000224993.3	ENST00000481681.1	467	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATCTCTGCCAACGTGAG	NA	False	NA	NA	False	NA	NA	NA	43667232	43666765	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_43666800_43667200
H1_mix_00073382	chr5	-	692	5	FSM	ENSG00000251141.6	ENST00000505401.1	692	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	3.89711431702997	3152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATGCAAAACATCAAGAGAA	32	True	NA	NA	False	NA	NA	NA	44808726	44777065	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_44777329_44777908_44777993_44785048_44785182_44786825_44786953_44808641
H1_mix_00073383	chr5	-	2287	15	NIC	ENSG00000177058.12	novel	2522	16	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_5	69.2291374306206	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCCTCTTTTATTTCTAA	11	True	NA	-2	True	AATAAA	-27	NA	55712278	55625846	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_55626660_55627890_55627981_55633753_55633903_55635543_55635658_55645788_55645896_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55704321_55704435_55711451_55711500_55712216
H1_mix_00073388	chr5	-	2082	12	FSM	ENSG00000086189.11	ENST00000680062.1	2082	12	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_11	130.897663642662	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTTATTGATATTTGGC	9164	False	NA	-13	True	AATAAA	-3	NA	62403624	62387964	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_62389053_62390875_62390983_62392170_62392235_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62402035_62402123_62403272_62403347_62403450
H1_mix_00073389	chr5	-	2779	11	FSM	ENSG00000086189.11	ENST00000680785.1	2784	11	5	0	1	0	multi-exon	FALSE	canonical	3	420	junction_5	22.0099977283052	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTATTTTGGTTCTC	8850	False	NA	-18	True	AGTAAA	-17	NA	62403938	62388526	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_62389053_62390875_62392235_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62402035_62402123_62403272_62403347_62403693
H1_mix_00073390	chr5	-	237	1	FSM	ENSG00000268942.2	ENST00000600888.2	237	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCTGGCAAGCTACTTT	NA	False	NA	NA	False	AAGAAA	-10	NA	62512482	62512245	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_62512200_62512500
H1_mix_00073392	chr5	-	2582	7	NNC	ENSG00000253203.6	novel	1296	4	NA	NA	-31305	15281	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	37.3571352696584	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTAATTGCTGTGCATG	329	False	NA	NA	False	AATAAA	-26	NA	69710564	69624177	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_69625901_69640191_69640367_69642204_69642290_69645881_69646070_69679144_69679301_69680765_69680800_69710343
H1_mix_00073393	chr5	-	5227	1	FSM	ENSG00000251158.1	ENST00000505635.1	4332	1	-950	55	-950	-55	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCGCTGATTCCTGCCCC	NA	False	NA	NA	False	NA	NA	NA	69904148	69898921	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_69898900_69904100
H1_mix_00073394	chr5	-	633	5	Fusion	ENSG00000253816.3_ENSG00000254701.3	novel	497	4	NA	NA	0	0	multi-exon	FALSE	canonical	3	19	junction_1	53.5560454103923	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGGCAGTTTAGCGCA	NA	False	NA	NA	False	NA	NA	NA	70258930	70197254	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr5_-_70197391_70219917_70220093_70221930_70222016_70225607_70225796_70258881
H1_mix_00073396	chr5	-	1681	17	NIC	ENSG00000145736.14	novel	2077	17	NA	NA	0	-21	combination_of_known_splicesites	FALSE	canonical	3	55	junction_16	148.366101249578	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTATGTTAATTCATTA	-8	True	NA	NA	False	ATTAAA	-14	NA	71067689	71035349	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_71035797_71037506_71037547_71041521_71041625_71042180_71042285_71045443_71045508_71048005_71048114_71048761_71048850_71049067_71049159_71055351_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71065124_71065223_71067654
H1_mix_00073397	chr5	-	1755	17	NNC	ENSG00000145736.14	novel	2077	17	NA	NA	-8	-34	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	170.652241415107	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGAATCTTTATGATTTA	21	False	NA	NA	False	ATTAAA	-34	NA	71067660	71035362	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_71035797_71037506_71037547_71038428_71038482_71041521_71041625_71042180_71042285_71045443_71045508_71048005_71048114_71048761_71048850_71049067_71049159_71055351_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71067493
H1_mix_00073398	chr5	-	3934	3	NIC	ENSG00000251634.2	novel	2851	9	NA	NA	15324	-1859	intron_retention	FALSE	canonical	3	17	junction_2	3.5	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCCAAACTAGGTAAGGA	NA	False	NA	NA	False	NA	NA	NA	71113429	71104756	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_71104912_71108660_71111689_71112678
H1_mix_00073400	chr5	-	494	1	FSM	ENSG00000272081.1	ENST00000606587.1	494	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGAGGTCTCAAGTTCAC	1031	False	NA	NA	False	NA	NA	NA	72955699	72955205	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_72955200_72955700
H1_mix_00073401	chr5	-	2431	1	FSM	ENSG00000251493.5	ENST00000615637.3	2512	1	91	-10	91	10	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGGCTTCAGTTGTCCC	90	False	NA	0	True	AATAAA	-33	NA	73448686	73446255	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_73446300_73448700
H1_mix_00073402	chr5	-	5833	3	NNC	ENSG00000176928.7	novel	5023	4	NA	NA	-1955	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	1	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGGACTTTATGAGCTT	-2	True	NA	-1	True	AATAAA	-21	NA	75054513	75025345	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_75030039_75047896_75048038_75053514
H1_mix_00073404	chr5	-	7312	18	NIC	ENSG00000113163.19	novel	2465	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	33.8733648209129	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAAATAAAGCGAGCTTT	0	True	NA	-32	True	AATATA	-43	NA	75511617	75368517	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_75368659_75369236_75374192_75379336_75379474_75381071_75381202_75381948_75382078_75384641_75384713_75385901_75386035_75389591_75389688_75400204_75400298_75402971_75403059_75411010_75411104_75416875_75417034_75419340_75419425_75425360_75425500_75426370_75426479_75459064_75459182_75505981_75506117_75511111
H1_mix_00073406	chr5	-	3232	2	FSM	ENSG00000164220.7	ENST00000296641.5	3398	2	166	0	166	0	multi-exon	FALSE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTTAAATGTACACAGT	199	False	NA	NA	False	AATAAA	-18	NA	76623237	76615481	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_76618643_76623166
H1_mix_00073407	chr5	-	248	1	FSM	ENSG00000238961.1	ENST00000458862.1	138	1	80	-190	80	190	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTCTGGCACTATCAGGG	6843	False	NA	NA	False	AAAAAG	-17	NA	77080491	77080243	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_77080200_77080500
H1_mix_00073408	chr5	-	2579	7	FSM	ENSG00000164253.14	ENST00000502528.5	3268	7	689	0	689	0	multi-exon	FALSE	canonical	3	257	junction_2	24.9315730216393	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTACACATTAAAGATTGA	NA	False	NA	-32	True	AATGAA	-15	NA	77452184	77432243	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_77433288_77436260_77436395_77437335_77437425_77438239_77438362_77440812_77440998_77449759_77449871_77451290
H1_mix_00073409	chr5	-	2553	13	NIC	ENSG00000164253.14	novel	3678	13	NA	NA	0	0	intron_retention	FALSE	canonical	1	11	junction_7	92.5666426599417	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTACACATTAAAGATTGA	-5	True	NA	-32	True	AATGAA	-15	NA	77492487	77432243	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_77433288_77436260_77436395_77437335_77437425_77438239_77438362_77440812_77440998_77449759_77449871_77451290_77451354_77453801_77453929_77459061_77459125_77463094_77463227_77464760_77464810_77489456_77489573_77492169
H1_mix_00073410	chr5	-	1806	12	NIC	ENSG00000164253.14	novel	3678	13	NA	NA	-3	-13	intron_retention	FALSE	canonical	3	10	junction_6	96.9423446271967	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTTGAAGTGGTGAGTG	-8	True	NA	2	True	AATATA	-29	NA	77492490	77432905	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_77433288_77436260_77436395_77437335_77437425_77438239_77438362_77440812_77440998_77449759_77449861_77453816_77453929_77459061_77459125_77463094_77463227_77464760_77464810_77489456_77489573_77492169
H1_mix_00073412	chr5	-	1170	5	FSM	ENSG00000132842.14	ENST00000522901.1	1170	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	125.394128650428	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGAATCATATTTGTCTT	NA	False	NA	-12	True	AATAAA	-6	NA	78039150	78002337	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_78003078_78015409_78015549_78020691_78020790_78034360_78034446_78039042
H1_mix_00073413	chr5	-	5133	7	NNC	ENSG00000145685.14	novel	4977	5	NA	NA	0	75097	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	180.389778596855	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAAGAGTTCCCGGCACC	-6	True	NA	NA	False	AAAAAG	-19	NA	78648895	78410117	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_78410134_78443659_78443678_78485230_78489154_78509783_78510399_78564812_78564872_78632263_78632369_78648498
H1_mix_00073414	chr5	-	4876	9	NNC	ENSG00000113273.17	novel	4852	8	NA	NA	0	44576	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	41.4455591710379	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAATGAAAGGTTCTCTG	-10	True	NA	NA	False	NA	NA	NA	78985310	78732632	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_78732659_78777210_78780663_78781851_78781975_78839355_78839427_78885583_78885828_78955294_78955503_78964415_78964607_78969005_78969193_78984936
H1_mix_00073415	chr5	-	1689	7	ISM	ENSG00000113273.17	ENST00000396151.7	2316	8	778	189	1	-189	3prime_fragment	FALSE	canonical	3	8	junction_1	44.3824915428996	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGCACATGTAGCTTACT	-9	True	NA	2	True	AATAAA	-32	NA	78985309	78815699	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_78816115_78839355_78839427_78885583_78885828_78955294_78955503_78964415_78964607_78969005_78969193_78984936
H1_mix_00073416	chr5	-	262	3	FSM	ENSG00000132837.15	ENST00000518707.1	455	3	86	107	86	-107	multi-exon	FALSE	canonical	0	0	junction_2	1.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATGTCGCAAGCAGCTTCA	137	False	NA	NA	False	NA	NA	NA	79235852	79120383	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_79120454_79121202_79121353_79235810
H1_mix_00073418	chr5	-	1222	8	NNC	ENSG00000164300.17	novel	547	4	NA	NA	6	-8380	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	31.8093812372054	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGAAGTTGTTTCCTCTTT	21	True	NA	-4	True	AATAAA	-17	NA	80256042	80165373	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_80165617_80166382_80166479_80169334_80169547_80174953_80175048_80177314_80177398_80177885_80178065_80202885_80203054_80255895
H1_mix_00073419	chr5	-	5664	5	NNC	ENSG00000189127.8	novel	3730	5	NA	NA	42	-5	intron_retention	FALSE	canonical	3	20	junction_2	3.64005494464026	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATTTTGGTTACTGATT	199	False	NA	-5	True	AATAAA	-10	NA	80570208	80556759	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_80560043_80563734_80565827_80566688_80566775_80568959_80569108_80570153
H1_mix_00073420	chr5	-	3508	7	NNC	ENSG00000228716.7	novel	1719	7	NA	NA	0	43624	intron_retention	FALSE	non_canonical	0	0	junction_1	317.780016503381	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGGTTCACACCCACCTA	1078	False	NA	NA	False	NA	NA	NA	80654547	80582601	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_80582629_80626227_80629166_80633876_80633993_80637882_80638010_80649388_80649495_80654007_80654058_80654403
H1_mix_00073421	chr5	-	3475	7	NNC	ENSG00000228716.7	novel	1719	7	NA	NA	0	43624	intron_retention	FALSE	non_canonical	0	0	junction_1	397.158238825114	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGGTTCACACCCACCTA	1078	False	NA	NA	False	NA	NA	NA	80654547	80582601	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_80582629_80626227_80629166_80633876_80633993_80637882_80637977_80649388_80649495_80654007_80654058_80654403
H1_mix_00073422	chr5	-	313	1	FSM	ENSG00000271043.2	ENST00000604882.2	87	1	-248	22	-248	-22	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTAAGTTCAGTTTTTT	5291	False	NA	NA	False	NA	NA	NA	80650334	80650021	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_80650000_80650300
H1_mix_00073423	chr5	-	375	2	FSM	ENSG00000251450.2	ENST00000660640.1	704	2	327	2	327	1	multi-exon	FALSE	canonical	2	12	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTACTATTTAATAAGTTCA	NA	False	NA	NA	False	AATAAA	-17	NA	80948404	80947695	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_80947995_80948328
H1_mix_00073425	chr5	-	770	3	Genic_Genomic	ENSG00000251495.1	novel	493	1	NA	NA	-26	64326	multi-exon	FALSE	non_canonical	0	0	junction_1	0	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTTGTACTCCATTAAAA	NA	False	NA	NA	False	NA	NA	NA	82010120	81945275	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr5_-_81945291_81946448_81946470_82009386
H1_mix_00073427	chr5	-	214	1	FSM	ENSG00000238835.1	ENST00000459004.1	134	1	-206	126	-206	-126	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAATGTCTGCTTCTCATT	NA	False	NA	NA	False	NA	NA	NA	83064543	83064329	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_83064300_83064500
H1_mix_00073428	chr5	-	520	4	FSM	ENSG00000134480.16	ENST00000646883.1	520	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	176.552793489338	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTAGTTGTTTATTTA	9905	False	NA	NA	False	ATTAAA	-27	NA	87399451	87376252	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_87376519_87392769_87392905_87395043_87395105_87399393
H1_mix_00073430	chr5	-	355	3	FSM	ENSG00000081189.16	ENST00000510980.1	527	3	172	0	172	0	multi-exon	FALSE	canonical	0	0	junction_1	2	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTAGAGACCGTACCACC	2875	False	NA	NA	False	NA	NA	NA	88729347	88722836	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_88722926_88728492_88728629_88729217
H1_mix_00073432	chr5	-	283	1	FSM	ENSG00000260871.1	ENST00000562820.1	896	1	371	242	371	-242	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTCAAAGAGGGAGAAGCAA	NA	False	NA	NA	False	AATAAA	-14	NA	90388992	90388709	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_90388700_90389000
H1_mix_00073433	chr5	-	315	2	Antisense	novelGene_ENSG00000248588.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	72	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATTTTACGACAAGAATTA	NA	False	NA	NA	False	NA	NA	NA	92829702	92825472	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr5_-_92825582_92829496
H1_mix_00073434	chr5	-	1721	5	FSM	ENSG00000237187.9	ENST00000607797.5	3380	5	0	1659	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.52769256906871	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGTGTTTTAAGTCTC	9897	False	NA	-1	True	AATAAA	-19	NA	93570793	93411017	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_93411510_93553760_93553864_93554873_93554996_93563363_93563464_93569889
H1_mix_00073435	chr5	-	3945	1	FSM	ENSG00000248483.7	ENST00000606183.4	8381	1	2621	1815	2621	-1815	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAATTCCAGCACTTTGG	2616	False	NA	NA	False	AAGAAA	-39	NA	93738979	93735034	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_93735000_93739000
H1_mix_00073436	chr5	-	3930	1	FSM	ENSG00000251023.1	ENST00000505668.1	3157	1	-858	85	-858	-85	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTGGGAGGCAGAGGTT	NA	False	NA	NA	False	NA	NA	NA	93864683	93860753	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_93860800_93864700
H1_mix_00073437	chr5	-	3492	2	NNC	ENSG00000185261.15	novel	4942	20	NA	NA	114867	93	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGCCTACTCATAATGTC	3	True	NA	93	True	AAAAAG	-25	NA	94362317	94150757	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_94154125_94362192
H1_mix_00073438	chr5	-	2207	5	FSM	ENSG00000185261.15	ENST00000329378.7	2262	5	21	34	-5	-34	multi-exon	FALSE	canonical	2	2	junction_3	3.34477204006491	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAATAAAATTTCAGTTGA	-7	True	NA	-27	True	TTTAAA	-35	NA	94618576	94519239	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_94520918_94523929_94524099_94536995_94537128_94582432_94582584_94618499
H1_mix_00073439	chr5	-	5820	12	NNC	ENSG00000118985.16	novel	5826	12	NA	NA	1	-1	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_8	47.9894960958874	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGTACTTGTTTTTCC	-6	True	NA	-9	True	AATAAA	-16	NA	95961850	95885098	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_95888988_95889085_95889131_95891102_95891275_95895627_95895692_95898239_95898811_95900692_95900781_95900955_95901081_95906522_95906783_95913774_95913935_95919423_95919546_95943001_95943050_95961574
H1_mix_00073440	chr5	-	932	2	NIC	ENSG00000289337.1	novel	1090	3	NA	NA	-39	-11	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTGTATGTATATATAT	NA	False	NA	-14	True	AATAAA	-4	NA	96172102	96165532	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_96166160_96171797
H1_mix_00073441	chr5	-	5320	20	FSM	ENSG00000164307.13	ENST00000296754.7	5495	20	0	175	0	-175	multi-exon	FALSE	canonical	1	1	junction_1	10.8088401288366	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATAACATATGCTAGTGT	3	True	NA	NA	False	NA	NA	NA	96808100	96760984	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_96763229_96776403_96776552_96780422_96780505_96781057_96781199_96781692_96781855_96783050_96783236_96783923_96784081_96785787_96785972_96786469_96786550_96788530_96788686_96790295_96790368_96790511_96790644_96792060_96792193_96793399_96793514_96793802_96793958_96795041_96795163_96797174_96797310_96800861_96801001_96803402_96803944_96807859
H1_mix_00073443	chr5	-	2438	5	Intergenic	novelGene_1177	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	12.5797456254091	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTTCTTTTCACAATGA	NA	False	NA	NA	False	AATAAA	-17	NA	101317688	101117701	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_-_101119720_101120941_101121003_101245788_101245880_101267118_101267229_101317530
H1_mix_00073444	chr5	-	272	2	FSM	ENSG00000205359.10	ENST00000511588.1	432	2	0	160	0	-2	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTCTGATAATGTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	102373429	102371947	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_102372127_102373336
H1_mix_00073445	chr5	-	3528	3	NNC	ENSG00000251027.2	novel	620	4	NA	NA	-3181	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	0.5	31	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCCCATCTGAATGGCT	NA	False	NA	-9	True	ATTAAA	-11	NA	106984050	106815205	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_106815547_106980763_106980871_106980970
H1_mix_00073446	chr5	-	3883	2	Intergenic	novelGene_1180	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	4	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTGCATAGGAAACCAAA	NA	False	NA	NA	False	AATAGA	-33	NA	106987318	106978389	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_-_106978894_106983939
H1_mix_00073451	chr5	-	1430	3	FSM	ENSG00000145782.13	ENST00000500945.2	1430	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	334	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTAGGCTGCAGAGGCAA	1	True	NA	NA	False	AATAAA	-14	NA	115841565	115830672	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_115831864_115832601_115832665_115841389
H1_mix_00073452	chr5	-	5925	6	FSM	ENSG00000169570.10	ENST00000304058.8	4365	6	-312	-1248	7	0	multi-exon	FALSE	canonical	1	1	junction_5	27.9041215593682	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGCCTCAGGATTATTT	0	True	NA	0	True	ATTAAA	-25	NA	118988532	118836073	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_118841088_118848089_118848219_118928536_118928730_118939195_118939291_118944558_118944650_118988129
H1_mix_00073453	chr5	-	626	2	NNC	ENSG00000250328.6	novel	1424	6	NA	NA	72	-20001	at_least_one_novel_splicesite	FALSE	canonical	2	39	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGCTTTATTGCTCACAA	279	False	NA	NA	False	NA	NA	NA	122478809	122474248	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_122474651_122478585
H1_mix_00073454	chr5	-	1257	6	NNC	ENSG00000168938.6	novel	1364	5	NA	NA	0	8916	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	97.9661165914011	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTGGGCACAGTGGCGT	-23	True	NA	NA	False	NA	NA	NA	123036725	123014333	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_123014360_123023382_123024004_123025783_123025969_123028774_123028869_123029304_123029419_123036508
H1_mix_00073455	chr5	-	266	1	FSM	ENSG00000263432.2	ENST00000577215.2	297	1	-1	32	-1	-32	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTCTGGGCAACATAGCAA	980	False	NA	NA	False	NA	NA	NA	123022784	123022518	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_123022500_123022800
H1_mix_00073456	chr5	-	5031	21	FSM	ENSG00000168944.17	ENST00000675686.1	5020	21	0	-11	0	6	multi-exon	FALSE	canonical	0	0	junction_13	45.5392962176624	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGAGCAGCCTGTTACT	-8	True	NA	-6	True	AATAAA	-25	NA	123423324	123344883	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_123346754_123349943_123350090_123364495_123364595_123372649_123372773_123377373_123377536_123378335_123378429_123382110_123382201_123382736_123382890_123382985_123383083_123384950_123385134_123386517_123386668_123388431_123388607_123389923_123390141_123391109_123391338_123393299_123393498_123399135_123399285_123412398_123412541_123416009_123416125_123418358_123418516_123422466_123422576_123422949
H1_mix_00073457	chr5	-	4861	20	FSM	ENSG00000168944.17	ENST00000675330.1	4873	20	23	-11	5	6	multi-exon	FALSE	canonical	0	0	junction_13	32.9693049555504	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGAGCAGCCTGTTACT	-19	True	NA	-6	True	AATAAA	-25	NA	123423398	123344883	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_123346754_123349943_123350090_123364495_123364595_123372649_123372773_123377373_123377536_123378335_123378429_123382110_123382201_123382736_123382890_123382985_123383083_123384950_123385134_123386517_123386668_123388431_123388607_123389923_123390006_123391109_123391338_123393299_123393498_123399135_123399285_123412398_123412541_123416009_123416125_123418358_123418516_123422949
H1_mix_00073458	chr5	-	3163	1	FSM	ENSG00000250539.1	ENST00000508125.1	1423	1	-218	-1522	-218	1522	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACTGTATTCATGAAAAT	NA	False	NA	NA	False	AGTAAA	-18	NA	123402562	123399399	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_123399400_123402600
H1_mix_00073459	chr5	-	468	5	NNC	ENSG00000253807.6	novel	650	4	NA	NA	180178	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	9.98436277385793	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTGTGATTTTTTTT	NA	False	NA	-4	True	AATAAA	-19	NA	124134501	124059793	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_124059949_124062417_124062511_124131913_124131999_124133082_124133140_124134423
H1_mix_00073460	chr5	-	230	2	Intergenic	novelGene_1195	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACAGGCTTCTTTGTCTCT	NA	False	NA	NA	False	NA	NA	NA	124629384	124586691	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_-_124586752_124629214
H1_mix_00073462	chr5	-	5949	11	NIC	ENSG00000168916.16	novel	6152	10	NA	NA	65	-8	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	35.976242160626	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAATAATGGCTTCTTG	94	False	NA	4	True	ATTAAA	-13	NA	124748742	124636924	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_124637907_124638781_124638824_124639132_124639215_124641251_124641406_124643510_124643684_124644243_124644662_124646678_124649134_124649609_124649698_124701013_124701270_124744083_124745173_124748532
H1_mix_00073463	chr5	-	2453	16	FSM	ENSG00000164904.18	ENST00000637206.1	2466	16	13	0	13	0	multi-exon	FALSE	canonical	1	1	junction_6	201.983827735457	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCAACAGTGAGATCCTG	6076	False	NA	NA	False	NA	NA	NA	126595256	126544009	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_126545020_126546323_126546400_126549928_126550003_126550195_126550294_126552020_126552138_126554286_126554394_126561082_126561125_126568258_126568357_126570781_126570860_126575419_126575465_126577078_126577212_126582850_126582975_126583931_126584013_126592663_126592730_126593350_126593405_126595006
H1_mix_00073464	chr5	-	2333	16	FSM	ENSG00000164904.18	ENST00000636743.1	2332	16	0	-1	0	0	multi-exon	FALSE	canonical	1	1	junction_15	201.802169352947	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCCGTCTTTACCAAAAAA	-13	True	NA	NA	False	NA	NA	NA	126595219	126544152	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_126545020_126546323_126546400_126549928_126550003_126550195_126550294_126552020_126552138_126554286_126554394_126555930_126556016_126559239_126559335_126561082_126561125_126568258_126568357_126570781_126570860_126575419_126575465_126577078_126577212_126582850_126582975_126583931_126584013_126595006
H1_mix_00073465	chr5	-	2533	18	FSM	ENSG00000164904.18	ENST00000636808.1	2639	18	106	0	13	0	multi-exon	FALSE	canonical	2	19	junction_17	186.541756691684	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCCGTCTTTACCAAAAAA	6076	False	NA	NA	False	NA	NA	NA	126595256	126544152	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_126545020_126546323_126546400_126549928_126550003_126550195_126550294_126552020_126552138_126554286_126554394_126555930_126556016_126559239_126559335_126561082_126561125_126568258_126568357_126570781_126570860_126575419_126575465_126577078_126577212_126582850_126582975_126583931_126584013_126592663_126592730_126593350_126593448_126595006
H1_mix_00073466	chr5	-	1855	16	FSM	ENSG00000164904.18	ENST00000553117.5	1935	16	80	0	13	0	multi-exon	FALSE	canonical	0	0	junction_5	201.935127096688	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGTCTCCTGACCAAGTG	6076	False	NA	NA	False	AATACA	-39	NA	126595256	126544595	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_126545020_126546323_126546400_126549928_126550003_126550195_126550294_126552020_126552138_126559239_126559335_126561082_126561125_126568258_126568357_126570781_126570860_126575419_126575465_126577078_126577212_126582850_126582975_126583931_126584013_126592663_126592730_126593350_126593405_126595006
H1_mix_00073467	chr5	-	860	1	FSM	ENSG00000250859.1	ENST00000510896.1	1379	1	602	-83	602	83	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGGTGTTCTGCATTTGA	5429	False	NA	NA	False	AAAAAG	-18	NA	127512240	127511380	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_127511400_127512200
H1_mix_00073469	chr5	-	825	4	FSM	ENSG00000169567.13	ENST00000508495.5	825	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	2470.64202182348	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTCTGAGTGTTGCGTT	-20	True	NA	-11	True	AATAAA	-23	NA	131165301	131159287	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_131159612_131160655_131160845_131162571_131162677_131165094
H1_mix_00073470	chr5	-	1070	4	FSM	ENSG00000169567.13	ENST00000508488.2	1070	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2460.86177317351	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTCTCTCTGAGTGTTG	-44	True	NA	-15	True	AATAAA	-19	NA	131165325	131159291	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_131159612_131162063_131162478_131162571_131162677_131165094
H1_mix_00073471	chr5	-	1380	1	FSM	ENSG00000217128.13	ENST00000623690.1	1373	1	0	-7	0	7	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTTAAACATTTCTTTAG	15	True	NA	NA	False	AATAAA	-21	NA	131796980	131795600	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_131795600_131797000
H1_mix_00073472	chr5	-	1431	10	FSM	ENSG00000164398.15	ENST00000493861.5	2066	10	635	0	635	0	multi-exon	FALSE	canonical	2	4	junction_8	1.76383420737639	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGATATATTCTACTTAA	7920	False	NA	NA	False	ATTAAA	-17	NA	131973400	131953903	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_131954372_131959535_131959608_131960519_131960622_131962534_131962679_131966415_131966533_131967939_131968029_131970127_131970201_131971549_131971646_131972723_131972859_131973265
H1_mix_00073473	chr5	-	1436	3	FSM	ENSG00000072682.20	ENST00000467587.1	456	3	223	-1203	223	0	multi-exon	FALSE	canonical	3	66	junction_1	9	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTTGTATATTGTGAATA	9918	False	NA	1	True	GATAAA	-18	NA	132195507	132191837	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_132193081_132194925_132195023_132195411
H1_mix_00073474	chr5	-	2311	15	FSM	ENSG00000072682.20	ENST00000428369.6	2397	15	86	0	86	0	multi-exon	FALSE	canonical	3	32	junction_14	15.6500309708242	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAAGTTCTGATACCTTG	7	True	NA	-107	True	NA	NA	NA	132227475	132192708	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_132193081_132194925_132195023_132195411_132195481_132198320_132198381_132198878_132198933_132203747_132203848_132204081_132204153_132207707_132207885_132209137_132209332_132210283_132210524_132213915_132214054_132217196_132217349_132217751_132217849_132218544_132218645_132227085
H1_mix_00073475	chr5	-	329	2	FSM	ENSG00000125347.15	ENST00000680352.1	329	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGCCTGGGACTCAGG	20	True	NA	NA	False	NA	NA	NA	132490773	132487925	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_132488026_132490544
H1_mix_00073476	chr5	-	2599	17	NNC	ENSG00000131437.16	novel	731	5	NA	NA	-5	3285	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	12.7598001551748	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGGTAGAGTAAAAATCAC	-27	True	NA	NA	False	AATAAA	-24	NA	132737577	132689342	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_132689733_132699170_132699296_132700215_132700285_132700646_132700701_132702086_132702213_132702557_132702669_132702884_132703066_132703462_132703620_132710958_132711058_132715756_132715932_132716244_132716443_132716844_132716985_132720608_132720715_132726127_132726213_132726353_132726499_132734204_132734479_132737413
H1_mix_00073477	chr5	-	2160	16	NIC	ENSG00000131437.16	novel	6325	17	NA	NA	29	-55	combination_of_known_splicesites	FALSE	canonical	1	4	junction_2	13.8393962617193	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGATATTCTCATGCCTGG	33	False	NA	-12	True	AATAAA	-5	NA	132737517	132696602	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_132696683_132699170_132699296_132700646_132700701_132702086_132702213_132702557_132702669_132702884_132703066_132703462_132703620_132710958_132711058_132715756_132715932_132716244_132716443_132716844_132716985_132720608_132720715_132726127_132726213_132726353_132726499_132734204_132734479_132737413
H1_mix_00073478	chr5	-	6193	9	ISM	ENSG00000164402.14	ENST00000378719.7	2751	10	-7	5185	2	1	5prime_fragment	FALSE	canonical	0	0	junction_6	64.6625857818878	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTGGTGTCTTTTTT	2	True	NA	-5	True	ATTAAA	-18	NA	132777246	132756003	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_132760993_132761132_132761266_132761457_132761627_132761799_132761897_132762483_132762646_132763705_132763893_132764223_132764420_132765408_132765530_132777107
H1_mix_00073479	chr5	-	3693	8	FSM	ENSG00000164403.15	ENST00000617339.4	3638	8	-35	-20	-35	0	multi-exon	FALSE	canonical	1	2	junction_7	7.36234212955721	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGTGTCATCTGCAGC	4192	False	NA	0	True	AATAAA	-15	NA	132826713	132822140	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_132823129_132823249_132823523_132823622_132823765_132823849_132824420_132824614_132824822_132825017_132825074_132825162_132826183_132826276
H1_mix_00073480	chr5	-	3505	8	NNC	ENSG00000164403.15	novel	3768	10	NA	NA	369	0	intron_retention	FALSE	canonical	1	1	junction_7	7.65053019371193	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGTGTCATCTGCAGC	627	False	NA	0	True	AATAAA	-15	NA	132830278	132822140	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_132823129_132823249_132823523_132823622_132823765_132823849_132824420_132824614_132824822_132825017_132825074_132825162_132826183_132830029
H1_mix_00073482	chr5	-	9862	21	NNC	ENSG00000072364.13	novel	9536	21	NA	NA	1	338	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_16	9.6864596215542	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTTTTTTTTTTTTTTT	-9	True	NA	NA	False	NA	NA	NA	132963617	132875056	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_132881187_132883339_132883561_132885075_132885120_132886309_132886404_132887520_132887593_132887845_132887983_132888096_132888161_132889078_132889174_132892163_132892405_132893029_132893119_132896322_132897241_132898229_132898393_132899103_132899142_132899586_132899642_132902441_132902488_132904367_132904405_132932177_132932223_132934146_132934942_132937066_132937194_132937648_132937741_132963258
H1_mix_00073484	chr5	-	702	6	FSM	ENSG00000072364.13	ENST00000477369.5	728	6	26	0	26	0	multi-exon	FALSE	canonical	3	20	junction_1	3.05941170815567	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTTCCAGTGACAGTGAG	9577	False	NA	NA	False	NA	NA	NA	132927536	132898282	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_132898393_132899103_132899142_132899586_132899642_132902441_132902488_132904367_132904405_132927120
H1_mix_00073485	chr5	-	739	2	FSM	ENSG00000113575.10	ENST00000495833.1	739	2	0	0	0	0	multi-exon	FALSE	canonical	3	1665	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGATAAAATTCTTTCAG	NA	False	NA	NA	False	NA	NA	NA	134202485	134200973	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_134201075_134201847
H1_mix_00073487	chr5	-	850	1	FSM	ENSG00000241179.1	ENST00000473936.1	355	1	-17	-478	-17	478	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAGAGAGAATGAGAAAAA	NA	False	NA	NA	False	AATATA	-40	NA	134805149	134804299	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_134804300_134805100
H1_mix_00073489	chr5	-	871	3	Intergenic	novelGene_1204	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_1	7	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCTGTTTGGTGGTCTC	NA	False	NA	0	True	AATAAA	-19	NA	136570902	136565378	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_-_136565798_136568530_136568729_136570648
H1_mix_00073490	chr5	-	657	2	Intergenic	novelGene_1205	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	0	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	NA	False	NA	-1	True	AATAAA	-18	NA	136570887	136565379	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_-_136565798_136570648
H1_mix_00073492	chr5	-	360	1	FSM	ENSG00000287067.1	ENST00000671107.1	2019	1	-16	1675	-16	-1675	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAAAAATTAGCTGGG	NA	False	NA	NA	False	NA	NA	NA	137759913	137759553	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_137759600_137759900
H1_mix_00073493	chr5	-	352	2	FSM	ENSG00000112981.5	ENST00000514481.1	352	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTTAAAGGAATAACTATT	NA	False	NA	NA	False	AATAAA	-19	NA	138116381	138115552	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138115765_138116241
H1_mix_00073494	chr5	-	1751	9	NIC	ENSG00000112983.18	novel	2876	20	NA	NA	2	-4	combination_of_known_splicesites	FALSE	canonical	3	31	junction_4	237.009493480746	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCCTTTGGCTTGTTCTGT	754	False	NA	-4	True	AATAAA	-15	NA	138166059	138156885	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_138157268_138159554_138159600_138160068_138160174_138160890_138161069_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827
H1_mix_00073495	chr5	-	2905	10	ISM	ENSG00000112983.18	ENST00000441656.5	2899	19	10571	4	-151	-4	3prime_fragment	FALSE	canonical	3	349	junction_1	151.407796984351	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCCTTTGGCTTGTTCTGT	NA	False	NA	-4	True	AATAAA	-15	NA	138167096	138156885	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_138157268_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827
H1_mix_00073496	chr5	-	2706	19	NIC	ENSG00000112983.18	novel	2967	20	NA	NA	12	-4	combination_of_known_junctions	FALSE	canonical	3	95	junction_10	230.806369597794	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCCTTTGGCTTGTTCTGT	346	False	NA	-4	True	AATAAA	-15	NA	138178616	138156885	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_138157268_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138167933_138168079_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
H1_mix_00073497	chr5	-	2760	18	NIC	ENSG00000112983.18	novel	2982	21	NA	NA	11	-4	combination_of_known_splicesites	FALSE	canonical	3	17	junction_16	235.121024567714	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCCTTTGGCTTGTTCTGT	12	True	NA	-4	True	AATAAA	-15	NA	138178617	138156885	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_138157268_138160068_138160174_138160890_138161069_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138166517_138166728_138167933_138168079_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177565_138177668_138178595
H1_mix_00073498	chr5	-	3305	21	NIC	ENSG00000112983.18	novel	3198	22	NA	NA	2	-4	combination_of_known_junctions	FALSE	canonical	3	95	junction_11	215.626552168326	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCCTTTGGCTTGTTCTGT	11	True	NA	-4	True	AATAAA	-15	NA	138178951	138156885	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_138157268_138159554_138159600_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138167933_138168079_138168469_138168689_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
H1_mix_00073501	chr5	-	4406	17	FSM	ENSG00000113013.16	ENST00000678300.1	4415	17	0	9	0	-9	multi-exon	FALSE	canonical	1	21	junction_16	656.325516488389	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGCAAAAAGAAATGATTGG	-26	True	NA	NA	False	CATAAA	-16	NA	138575417	138553764	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138556115_138556451_138556593_138556773_138556867_138557401_138557497_138557868_138557987_138558552_138558658_138559863_138560092_138561579_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574122_138575237
H1_mix_00073502	chr5	-	4318	16	FSM	ENSG00000113013.16	ENST00000677425.1	4327	16	0	9	0	-9	multi-exon	FALSE	canonical	3	73	junction_8	653.095650643065	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGCAAAAAGAAATGATTGG	-26	True	NA	NA	False	CATAAA	-16	NA	138575417	138553764	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138556115_138556451_138556593_138556773_138556867_138557401_138557497_138557868_138557987_138558552_138558658_138559863_138560092_138561579_138561790_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574127_138575237
H1_mix_00073503	chr5	-	4187	16	FSM	ENSG00000113013.16	ENST00000677064.1	4196	16	0	9	0	-9	multi-exon	FALSE	canonical	3	173	junction_6	641.95731945356	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGCAAAAAGAAATGATTGG	-30	True	NA	NA	False	CATAAA	-16	NA	138575421	138553764	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_138556115_138556451_138556593_138556773_138556867_138557401_138557497_138557868_138557987_138558552_138558658_138561579_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574127_138575237
H1_mix_00073504	chr5	-	1613	10	ISM	ENSG00000120725.13	ENST00000265195.9	1895	11	1787	235	-1	6	3prime_fragment	FALSE	canonical	0	0	junction_9	21.0595862456865	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCTTTCTGCTGTGTGTC	1860	False	NA	-5	True	ATTAAA	-18	NA	139196529	138946988	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_138947474_138951170_138951336_138951787_138951885_139021170_139021293_139026800_139026993_139042619_139042720_139050937_139051047_139121034_139121174_139127738_139127854_139196440
H1_mix_00073505	chr5	-	6944	5	Fusion	ENSG00000228672.4_ENSG00000170469.11	novel	909	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	18	junction_1	16.0312195418814	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTGAGGTGCCTGATT	19	False	NA	0	True	AATAAA	-34	NA	139404067	139390591	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr5_-_139397144_139401754_139401826_139401914_139402046_139402627_139402694_139403943
H1_mix_00073507	chr5	-	543	1	FSM	ENSG00000272255.1	ENST00000606683.1	543	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTAAGGTTTACCCTTCT	6195	False	NA	NA	False	AATAAA	-20	NA	139645002	139644459	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_139644500_139645000
H1_mix_00073508	chr5	-	1726	4	FSM	ENSG00000245146.7	ENST00000654348.1	3974	4	687	1561	-105	-55	multi-exon	FALSE	canonical	1	1	junction_3	0.471404520791032	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTTTGTATCAATAAAAAA	7474	False	NA	NA	False	ATTAAA	-32	NA	140107301	140103014	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_140104167_140105586_140105763_140106295_140106491_140107098
H1_mix_00073509	chr5	-	1138	2	FSM	ENSG00000113068.10	ENST00000514611.1	1139	2	1	0	1	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTCAAAATGCATCCCTAA	2514	False	NA	-38	True	AATAAA	-1	NA	140300582	140245086	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_140246058_140300415
H1_mix_00073511	chr5	-	3651	9	NIC	ENSG00000113108.20	novel	2131	13	NA	NA	21	0	intron_retention	FALSE	canonical	3	52	junction_2	15.4064718543864	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGATGTGAGTATATTGGG	2	True	NA	-1	True	AATAAA	-19	NA	140564575	140558267	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_140558822_140560312_140560505_140560638_140560755_140561017_140561102_140561364_140561450_140561586_140562228_140562352_140562500_140562662_140563671_140563751
H1_mix_00073512	chr5	-	2729	12	FSM	ENSG00000170445.16	ENST00000676327.1	2729	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	144.920839035581	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGTACGGGTGTAAACCCA	-36	True	NA	NA	False	NA	NA	NA	140691389	140673034	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_140674329_140674678_140674826_140675016_140675134_140676653_140676897_140676988_140677117_140677326_140677421_140677654_140677754_140679001_140679128_140679787_140679884_140683099_140683220_140690854_140690945_140691214
H1_mix_00073514	chr5	-	577	1	FSM	ENSG00000278915.1	ENST00000624566.1	577	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGAGTCGATCCTATTC	NA	False	NA	NA	False	AGTAAA	-22	NA	140875922	140875345	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_140875300_140875900
H1_mix_00073515	chr5	-	5764	28	NNC	ENSG00000131504.18	novel	5843	29	NA	NA	-25	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	116.183868751323	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACAGCTTCCTGTGTGAA	0	True	NA	-18	True	AATAAA	-19	NA	141619025	141515016	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_141517009_141524142_141524230_141526037_141526174_141526296_141526460_141527570_141527698_141528452_141528583_141528701_141528942_141529171_141529274_141529602_141529698_141534334_141534434_141571427_141571437_141571925_141572041_141573491_141574209_141574966_141575147_141576229_141576295_141576755_141576872_141577474_141577592_141578224_141578344_141578514_141578626_141579087_141579197_141580743_141580884_141582311_141582376_141583205_141583293_141583484_141583616_141584123_141584226_141587041_141587198_141588223_141588251_141618797
H1_mix_00073516	chr5	-	5737	27	NNC	ENSG00000131504.18	novel	4668	27	NA	NA	-25	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	111.867902075586	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACAGCTTCCTGTGTGAA	0	True	NA	-18	True	AATAAA	-19	NA	141619025	141515016	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_141517009_141524142_141524230_141526037_141526174_141526296_141526461_141527571_141527698_141528452_141528583_141528701_141528942_141529171_141529274_141529602_141529698_141534334_141534434_141571427_141571437_141571925_141572041_141573491_141574209_141574966_141575147_141576229_141576295_141576755_141576872_141577474_141577592_141578224_141578344_141578514_141578626_141579087_141579197_141580743_141580884_141582311_141582376_141583205_141583293_141583484_141583616_141584123_141584226_141587041_141587198_141618797
H1_mix_00073517	chr5	-	2548	21	NNC	ENSG00000197948.11	novel	4319	20	NA	NA	78	65	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	26.1809090751257	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGGTCACTGGGGTTGG	214	False	NA	NA	False	NA	NA	NA	141651298	141641143	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_141641564_141641701_141641758_141643000_141643089_141644217_141644439_141644572_141644691_141644858_141644943_141645019_141645149_141645770_141645933_141646086_141646192_141646602_141646723_141647134_141647231_141647397_141647521_141647967_141648097_141648464_141648536_141648956_141649021_141649171_141649309_141649394_141649531_141649886_141649955_141650358_141650405_141651019_141651117_141651220
H1_mix_00073518	chr5	-	2530	21	NIC	ENSG00000197948.11	novel	4319	20	NA	NA	6	65	combination_of_known_junctions	FALSE	canonical	2	21	junction_3	18.9509894200804	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGGTCACTGGGGTTGG	142	False	NA	NA	False	NA	NA	NA	141651370	141641143	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_141641564_141641701_141641758_141642396_141642504_141643000_141643089_141644217_141644439_141644572_141644691_141644858_141644943_141645019_141645149_141645770_141645933_141646086_141646192_141646602_141646723_141647134_141647231_141647397_141647521_141647967_141648097_141648956_141649021_141649171_141649309_141649394_141649531_141649886_141649955_141650358_141650405_141651019_141651118_141651347
H1_mix_00073519	chr5	-	5154	33	NNC	ENSG00000120318.16	novel	5258	33	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_13	37.4874458152326	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATTCTCATTCATTCAT	11	True	NA	-5	True	AATAAA	-18	NA	141682217	141653400	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_141654436_141655361_141655401_141655620_141655759_141655868_141655933_141656063_141656100_141656193_141656277_141656503_141656638_141656717_141656847_141658364_141658480_141658578_141658654_141659407_141659477_141659778_141659927_141661683_141661790_141662102_141662256_141664921_141665086_141665310_141665375_141666423_141666644_141669708_141669812_141669921_141670064_141670511_141670629_141671264_141671401_141671569_141671753_141671894_141671981_141672101_141672302_141672551_141672659_141672740_141672926_141673012_141673134_141673400_141673471_141673604_141673809_141679544_141679657_141679760_141679823_141679962_141680472_141682172
H1_mix_00073520	chr5	-	474	1	FSM	ENSG00000278925.1	ENST00000623837.1	618	1	-42	186	-42	-186	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCATCCTCTCATCCATC	NA	False	NA	NA	False	NA	NA	NA	141826367	141825893	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_141825900_141826400
H1_mix_00073521	chr5	-	206	1	FSM	ENSG00000226040.3	ENST00000515639.1	522	1	335	-19	335	19	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTAGTATGAAATAACGCAA	NA	False	NA	NA	False	CATAAA	-36	NA	141896354	141896148	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_141896100_141896400
H1_mix_00073522	chr5	-	403	3	FSM	ENSG00000186314.12	ENST00000515475.1	582	3	10	169	10	-169	multi-exon	FALSE	canonical	3	35	junction_2	3.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGTTAGAAACTTCCTACT	-6	True	NA	NA	False	NA	NA	NA	145835359	145819856	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_145820019_145823076_145823135_145835176
H1_mix_00073523	chr5	-	1907	4	FSM	ENSG00000173261.9	ENST00000311450.9	1919	4	8	4	8	-4	multi-exon	FALSE	canonical	2	2	junction_3	2.05480466765633	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTGTCTCTACTGTTCT	8094	False	NA	-9	True	AATAAA	-11	NA	146105569	146084316	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_146084573_146085460_146085598_146098155_146098293_146104192
H1_mix_00073524	chr5	-	2031	11	NIC	ENSG00000156475.19	novel	2093	10	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_9	76.4397802194643	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCTTGTTTTGTGAAAA	17	True	NA	0	True	AATAAA	-22	NA	146878747	146589503	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_146590227_146592970_146593063_146600290_146600461_146638250_146638416_146650546_146650725_146691127_146691241_146697978_146698145_146701044_146701143_146856498_146856584_146878001_146878196_146878700
H1_mix_00073531	chr5	-	669	5	FSM	ENSG00000164587.13	ENST00000518139.5	669	5	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	13772.1365354109	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTCAACTCCAGCCTTC	2021	False	NA	-15	True	AATAAA	-16	NA	150447735	150444237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_150444354_150444478_150444642_150445608_150445686_150446801_150446964_150447584
H1_mix_00073534	chr5	-	2344	12	NNC	ENSG00000086589.12	novel	2299	11	NA	NA	0	21158	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	88.0024417392274	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATATATGGGCCCTGAGGA	-36	True	NA	NA	False	NA	NA	NA	150701077	150669633	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_150669666_150690793_150691882_150692894_150693027_150693218_150693308_150694075_150694241_150695505_150695707_150696532_150696706_150696790_150696892_150698498_150698632_150699241_150699272_150700443_150700498_150700931
H1_mix_00073535	chr5	-	3842	14	NNC	ENSG00000132912.13	novel	4116	13	NA	NA	0	38806	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	43.7362996300035	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATATATGGGCCCTGAGGA	-9	True	NA	NA	False	NA	NA	NA	150759017	150669633	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_150669667_150708746_150711363_150715564_150715663_150718275_150718384_150719715_150719771_150722906_150722981_150730630_150730741_150731043_150731157_150731415_150731490_150733367_150733476_150742113_150742158_150753478_150753658_150756416_150756488_150758858
H1_mix_00073538	chr5	-	3224	5	FSM	ENSG00000145908.13	ENST00000418587.6	3226	5	11	-9	6	9	multi-exon	FALSE	non_canonical	1	7	junction_1	58.5619330282053	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCACTTCTTTGTGATCC	6	True	NA	-5	True	CATAAA	-37	NA	150904972	150894382	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_150896974_150898061_150898185_150898427_150898555_150903863_150903978_150904703
H1_mix_00073539	chr5	-	4210	6	NIC	ENSG00000145908.13	novel	4155	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	14	junction_3	49.8894778485404	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCTGCCTAATGTCTCTT	189	False	NA	-21	True	CATAAA	-21	NA	150904789	150894398	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_150898185_150898427_150898555_150903140_150903183_150903328_150903384_150903863_150903978_150904703
H1_mix_00073540	chr5	-	2715	18	FSM	ENSG00000145901.16	ENST00000523338.5	2711	18	0	-4	0	0	multi-exon	FALSE	canonical	1	1	junction_17	45.8076314640478	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTGACTCATGTTCATT	-5	True	NA	-8	True	CATAAA	-21	NA	151087158	151029944	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_151030674_151032286_151032384_151033607_151033800_151035001_151035068_151035581_151035708_151036789_151036922_151039096_151039226_151042539_151042672_151042895_151042962_151045860_151045951_151049823_151049948_151052164_151052260_151056765_151056958_151060317_151060396_151062126_151062213_151063612_151063748_151064959_151065132_151087084
H1_mix_00073542	chr5	-	1408	10	NNC	ENSG00000113140.11	novel	3451	10	NA	NA	0	-648	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_8	463.748974242651	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGGCAAAGGGAAGTAACAG	0	True	NA	63	True	NA	NA	NA	151686915	151663135	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_151663600_151664086_151664236_151666360_151666510_151667466_151667601_151669663_151669785_151671572_151671695_151673128_151673217_151674611_151674672_151676131_151676202_151686864
H1_mix_00073545	chr5	-	2788	14	NIC	ENSG00000055147.19	novel	4414	14	NA	NA	0	190	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	23.2564809316767	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACACTTCATGTCATAGC	1585	False	NA	NA	False	NA	NA	NA	154037310	153992308	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_153993111_153994918_153994973_153997802_153997876_154002250_154002391_154002846_154002970_154011240_154011321_154026398_154026523_154027175_154027335_154028148_154028284_154029488_154029581_154033790_154033884_154034277_154034378_154034743_154034968_154036721
H1_mix_00073547	chr5	-	564	4	FSM	ENSG00000170271.11	ENST00000524363.5	584	4	20	0	20	0	multi-exon	FALSE	canonical	0	0	junction_2	6.34209919681348	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCCCACCCTATAGAGCAT	274	False	NA	NA	False	AAGAAA	-41	NA	154834934	154822494	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_154822578_154823307_154823593_154834624_154834729_154834842
H1_mix_00073548	chr5	-	1382	2	FSM	ENSG00000155868.8	ENST00000420343.1	1382	2	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATAGCAAAGTTTTCGT	85	False	NA	-25	True	AGTAAA	-18	NA	157142775	157138441	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_157139449_157142400
H1_mix_00073550	chr5	-	3477	11	FSM	ENSG00000145860.12	ENST00000519865.5	3478	11	0	1	0	-1	multi-exon	FALSE	canonical	0	0	junction_10	55.4703524416422	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTATGTTTTGTTCTTGTGG	3	True	NA	-3	True	AATAAA	-17	NA	159208073	159157409	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_159159036_159161265_159161623_159162931_159163080_159168872_159169056_159169678_159169820_159173982_159174159_159176631_159176868_159181959_159182052_159194715_159194825_159203433_159203657_159207887
H1_mix_00073558	chr5	-	4117	18	NIC	ENSG00000072786.13	novel	5892	19	NA	NA	0	-194	combination_of_known_splicesites	FALSE	canonical	2	5	junction_10	31.7785372936822	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCCAACATGGCAAAACCC	-1	True	NA	NA	False	NA	NA	NA	172188224	172043304	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_172045023_172052928_172053043_172054568_172054695_172055587_172055777_172057348_172057474_172061138_172061269_172064719_172064813_172082325_172082506_172082960_172083085_172090231_172090363_172096425_172096561_172105655_172105738_172106619_172106815_172107779_172107853_172117480_172117631_172127372_172127422_172156623_172156789_172187886
H1_mix_00073561	chr5	-	3831	11	NNC	ENSG00000146083.12	novel	4122	11	NA	NA	-304	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_10	40.6024629794795	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACCGCCCACGCTGCCTTT	9	True	NA	-16	True	AATAAA	-18	NA	176536634	176526711	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_176529091_176529287_176529388_176529522_176529645_176529730_176529819_176530081_176530207_176530581_176530744_176530847_176531022_176531462_176531631_176532003_176532194_176532365_176532517_176536462
H1_mix_00073562	chr5	-	3936	11	NIC	ENSG00000146083.12	novel	4122	11	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_9	39.0942451007818	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACCGCCCACGCTGCCTTT	6222	False	NA	-16	True	AATAAA	-18	NA	176537277	176526711	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_176529091_176529287_176529388_176529522_176529645_176529730_176529819_176530081_176530207_176530581_176530744_176530847_176531022_176531462_176531631_176532003_176532133_176532365_176532517_176536939
H1_mix_00073563	chr5	-	4049	11	NNC	ENSG00000146083.12	novel	4122	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_7	36.1420807370024	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACCGCCCACGCTGCCTTT	-6	True	NA	-16	True	AATAAA	-18	NA	176537402	176526711	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_176529091_176529287_176529388_176529522_176529645_176529730_176529819_176530081_176530207_176530581_176530744_176530847_176531013_176531462_176531631_176532003_176532130_176532365_176532517_176536939
H1_mix_00073564	chr5	-	3899	11	NNC	ENSG00000146083.12	novel	4122	11	NA	NA	-5475	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_10	42.8216066956858	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACCGCCCACGCTGCCTTT	-1	True	NA	-16	True	AATAAA	-18	NA	176543500	176526711	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_176529091_176529287_176529388_176529522_176529645_176529730_176529819_176530081_176530207_176530581_176530744_176530847_176531022_176531462_176531631_176532003_176532194_176532365_176532517_176543260
H1_mix_00073567	chr5	-	1609	6	FSM	ENSG00000169228.14	ENST00000495458.5	1608	6	0	-1	0	0	multi-exon	FALSE	canonical	3	149	junction_1	10.4	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCCCCTTTCCCTGCTG	21	True	NA	-5	True	AATAAA	-22	NA	177303681	177301450	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_177301808_177301924_177301988_177302127_177302497_177302576_177302645_177302751_177302831_177303008
H1_mix_00073573	chr5	-	1749	13	NNC	ENSG00000196923.14	novel	1712	13	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_12	161.191634570642	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTGCCCTTCCCCTG	-10	True	NA	-8	True	AATAAA	-17	NA	177496822	177483393	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_177483731_177483866_177483983_177484069_177484191_177488067_177488249_177489392_177489628_177489770_177489833_177490869_177490907_177491009_177491147_177491806_177491926_177492404_177492436_177492525_177492678_177496416_177496524_177496708
H1_mix_00073580	chr5	-	4389	12	NIC	ENSG00000146067.16	novel	4604	12	NA	NA	0	7	intron_retention	FALSE	canonical	3	29	junction_10	89.0457213787825	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTGATTTGTGGGTCT	212	False	NA	7	True	GATAAA	-26	NA	177554347	177519781	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_177520182_177521973_177522072_177523956_177524033_177524184_177525206_177531281_177531522_177531952_177532201_177532442_177532642_177536357_177536746_177537872_177538108_177538904_177539148_177547167_177547229_177553167
H1_mix_00073581	chr5	-	4309	11	NIC	ENSG00000146067.16	novel	4604	12	NA	NA	4	1	intron_retention	FALSE	canonical	3	7	junction_5	85.8301229173068	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCATGTTGGTGATTTGT	22	False	NA	1	True	GATAAA	-20	NA	177554537	177519787	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_177520182_177521973_177522072_177523956_177524033_177524184_177525206_177531281_177531522_177532155_177532201_177532442_177532642_177536357_177536746_177537872_177538108_177538904_177539148_177553167
H1_mix_00073582	chr5	-	3092	10	NIC	ENSG00000146067.16	novel	4604	12	NA	NA	-10	1	combination_of_known_splicesites	FALSE	canonical	3	26	junction_9	77.568289308021	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCATGTTGGTGATTTGT	8	True	NA	1	True	GATAAA	-20	NA	177554551	177519787	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_177520182_177521973_177522072_177523956_177524033_177524184_177525206_177531281_177531522_177532442_177532642_177536357_177536746_177537872_177538108_177538904_177539043_177554248
H1_mix_00073592	chr5	-	2201	14	NIC	ENSG00000169045.17	novel	2279	14	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_3	143.350482896799	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTCTTGTCTGTGCTTC	7	True	NA	-3	True	AATAAA	-21	NA	179623662	179614177	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_179614960_179615545_179615596_179616125_179616219_179616898_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036_179623165_179623594
H1_mix_00073593	chr5	-	2913	7	FSM	ENSG00000169045.17	ENST00000502904.5	2913	7	0	0	0	0	multi-exon	FALSE	canonical	3	493	junction_6	22.341416447685	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGTCTTGTCTGTGCTT	5693	False	NA	-4	True	AATAAA	-20	NA	179618899	179614178	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_179614960_179615545_179615596_179616125_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144
H1_mix_00073594	chr5	-	2081	12	NIC	ENSG00000169045.17	novel	3667	13	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_2	156.618133271411	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGTCTTGTCTGTGCTT	1429	False	NA	-4	True	AATAAA	-20	NA	179623163	179614178	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr5_-_179614960_179616125_179616219_179616898_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036
H1_mix_00073605	chr5	-	1724	7	ISM	ENSG00000197226.13	ENST00000356834.7	5173	22	0	25605	0	0	5prime_fragment	FALSE	canonical	3	227	junction_3	24.9799919935936	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATATTGTATTCACACTT	6	True	NA	-36	True	NA	NA	NA	179907859	179887670	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr5_-_179888313_179891378_179891587_179893208_179893468_179894385_179894615_179899188_179899308_179904701_179904813_179907703
H1_mix_00073606	chr5	-	752	4	NNC	ENSG00000196670.14	novel	725	4	NA	NA	0	-39	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	33.0790299468141	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGTAAAGTGGAATTCCAA	-7	True	NA	-46	True	NA	NA	NA	180861276	180847653	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr5_-_180848083_180851380_180851494_180860527_180860680_180861218
H1_mix_00073607	chr5	-	825	6	FSM	ENSG00000204628.12	ENST00000511566.5	825	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	5052.18647320148	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACTTTTAGGTTTTTTT	315	False	NA	-25	True	AATAAA	-16	NA	181243880	181236933	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr5_-_181237043_181239066_181239178_181239486_181239583_181241491_181241640_181242173_181242346_181243691
H1_mix_00073608	chr5	+	1991	1	Intergenic	novelGene_1131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTACTATATTGCTTTA	NA	False	NA	NA	False	NA	NA	NA	1608228	1610219	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_1608200_1610200
H1_mix_00073610	chr5	+	6287	1	Intergenic	novelGene_1138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATT	6271	False	NA	NA	False	NA	NA	NA	14423930	14430217	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_14423900_14430200
H1_mix_00073611	chr5	+	328	1	Intergenic	novelGene_1139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCCGACAAGGGCAGCAG	698	False	NA	NA	False	NA	NA	NA	14582511	14582839	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_14582500_14582800
H1_mix_00073613	chr5	+	383	1	Intergenic	novelGene_1156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTCACTGCAACCTCCA	8238	False	NA	NA	False	NA	NA	NA	70409766	70410149	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_70409800_70410100
H1_mix_00073614	chr5	+	2000	1	Intergenic	novelGene_1158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTGTGTTCATGTGTT	NA	False	NA	NA	False	AATAAA	-26	NA	70453563	70455563	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_70453600_70455600
H1_mix_00073615	chr5	+	359	1	Intergenic	novelGene_1164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCGGACATAATTCCTCAG	NA	False	NA	NA	False	NA	NA	NA	76361324	76361683	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_76361300_76361700
H1_mix_00073616	chr5	+	425	1	Intergenic	novelGene_1181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCCCTTCCCTACACATC	NA	False	NA	NA	False	NA	NA	NA	108553018	108553443	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_108553000_108553400
H1_mix_00073617	chr5	+	1219	1	Intergenic	novelGene_1185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATTATAAAGTGAGCTAGA	NA	False	NA	NA	False	NA	NA	NA	115515442	115516661	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_115515400_115516700
H1_mix_00073618	chr5	+	3341	1	Intergenic	novelGene_1188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAACCTCTAGGACCCCGG	NA	False	NA	NA	False	AATATA	-18	NA	120736670	120740011	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_120736700_120740000
H1_mix_00073619	chr5	+	477	1	Intergenic	novelGene_1213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAATTAAGAGTAC	1666	False	NA	NA	False	AATAAA	-29	NA	143334255	143334732	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr5_+_143334300_143334700
H1_mix_00073623	chr6	+	1536	8	FSM	ENSG00000112679.15	ENST00000344450.9	1485	8	-51	0	-51	0	multi-exon	FALSE	canonical	3	57	junction_7	56.1753813461712	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCGCGTGCGATGCATTCT	195	False	NA	16	True	AATAAA	-22	NA	292045	351355	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_292561_304627_304662_311879_311963_335113_335164_345853_345929_348102_348275_348768_348842_350821
H1_mix_00073624	chr6	+	867	4	FSM	ENSG00000112679.15	ENST00000605315.5	867	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	90.7462885681221	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCTCCAGGCCCCTGCA	-17	True	NA	NA	False	NA	NA	NA	292274	349102	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_292561_345853_345929_348102_348275_348768
H1_mix_00073625	chr6	+	3075	7	FSM	ENSG00000112679.15	ENST00000419235.7	3075	7	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	50.4559764106845	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCGCGTGCGATGCATTCT	-11	True	NA	16	True	AATAAA	-22	NA	292486	351355	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_292561_304627_304662_311879_311963_335113_335164_345853_345929_348102_348275_348768
H1_mix_00073627	chr6	+	5323	9	FSM	ENSG00000137265.15	ENST00000380956.9	5314	9	-13	4	-13	-4	multi-exon	TRUE	canonical	2	2	junction_6	1.85404962177392	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATGGAATGTGTGTGTGT	NA	False	NA	13	True	AATAAA	-16	NA	391738	411439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_391810_393097_393369_394820_395008_395846_395936_397107_397253_398827_398936_401423_401778_405017_405131_407454
H1_mix_00073628	chr6	+	2727	1	FSM	ENSG00000164379.7	ENST00000296839.5	2661	1	-68	2	-68	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGATGGGTTGGAAGTGGA	93	False	NA	13	True	AATAAA	-22	NA	1312029	1314756	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_1312000_1314800
H1_mix_00073629	chr6	+	3989	1	FSM	ENSG00000054598.9	ENST00000645831.2	3983	1	-15	9	-15	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCAAAAACTGCTCTACGT	-12	True	NA	5	True	AATAAA	-15	NA	1609899	1613888	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_1609900_1613900
H1_mix_00073630	chr6	+	3010	3	FSM	ENSG00000250903.10	ENST00000530833.6	2988	3	-22	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	6	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTAAGAATGGTTTTTGCA	-9	True	NA	NA	False	TTTAAA	-40	NA	2245758	2266348	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_2245931_2248836_2248927_2263600
H1_mix_00073631	chr6	+	494	4	FSM	ENSG00000250903.10	ENST00000533653.5	568	4	0	74	0	-74	multi-exon	FALSE	canonical	2	4	junction_3	7.84573486395988	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCACTGTACCCAGCCAGG	48	False	NA	NA	False	NA	NA	NA	2245852	2269939	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_2245931_2248836_2248927_2263600_2263685_2269697
H1_mix_00073632	chr6	+	2616	7	FSM	ENSG00000124535.16	ENST00000380771.8	2595	7	-21	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	109.964640781581	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCGATTCTGTCATGGT	-70	True	NA	14	True	AATAAA	-15	NA	2765392	2785745	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_2766445_2768690_2768883_2770194_2770362_2779262_2779493_2783405_2783562_2784323_2784404_2785006
H1_mix_00073633	chr6	+	3756	7	FSM	ENSG00000124535.16	ENST00000380773.9	3898	7	0	142	0	-142	multi-exon	FALSE	canonical	3	270	junction_2	25.071010261965	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTTAAAAGTCTGCACT	-70	True	NA	NA	False	NA	NA	NA	2765392	2786810	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_2766445_2768690_2768883_2770119_2770362_2779262_2779493_2783405_2783562_2784323_2784404_2785006
H1_mix_00073634	chr6	+	1911	2	FSM	ENSG00000244041.7	ENST00000454015.1	777	2	-214	-920	-204	-1	multi-exon	FALSE	canonical	3	25	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGGCGTTTCTCTGTAA	477	False	NA	22	True	AATAAA	-22	NA	2988443	2991172	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_2988710_2989527
H1_mix_00073635	chr6	+	1575	3	FSM	ENSG00000244041.7	ENST00000605901.1	1573	3	-2	0	-2	0	multi-exon	FALSE	canonical	3	23	junction_2	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCGTTTCTCTGTAAC	2	True	NA	23	True	AATAAA	-23	NA	2988645	2991173	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_2988710_2989527_2989734_2989868
H1_mix_00073636	chr6	+	1073	7	FSM	ENSG00000124588.22	ENST00000380455.11	1073	7	0	0	0	0	multi-exon	FALSE	canonical	3	948	junction_4	106.564534438058	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGATACTTTTTTCTT	0	True	NA	15	True	AATAAA	-16	NA	2999893	3019755	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_3000086_3006467_3006560_3010024_3010190_3012543_3012675_3015529_3015644_3016883_3016986_3019478
H1_mix_00073637	chr6	+	1834	9	NIC	ENSG00000137275.16	novel	4454	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_1	19.6786686541544	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATGGGTCTTCGATAGT	NA	False	NA	NA	False	AATACA	-35	NA	3063861	3106051	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_3064060_3076763_3076988_3077778_3077936_3080978_3081117_3083084_3083314_3085258_3085409_3089580_3089658_3104224_3104316_3105481
H1_mix_00073638	chr6	+	5879	10	FSM	ENSG00000137275.16	ENST00000380409.3	3947	10	-1887	-45	-1849	8	multi-exon	FALSE	canonical	2	4	junction_3	41.1582312545134	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGATGTGATGTGTCACT	NA	False	NA	21	True	AATAAA	-23	NA	3061974	3115195	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_3064060_3076763_3076988_3077778_3077936_3083084_3083314_3085258_3085409_3089580_3089658_3104224_3104316_3105481_3106052_3110802_3110956_3113052
H1_mix_00073639	chr6	+	4105	11	NIC	ENSG00000137275.16	novel	4454	13	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_1	18.9198308660516	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGGCTATTGATGTGAT	NA	False	NA	13	True	AATAAA	-15	NA	3063878	3115187	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_3064060_3076763_3076988_3077778_3077936_3080978_3081117_3083084_3083314_3085258_3085409_3089580_3089658_3104224_3104316_3105481_3106052_3110802_3110956_3113052
H1_mix_00073640	chr6	+	4092	11	FSM	ENSG00000137275.16	ENST00000259808.9	4092	11	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	16.5798069952578	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGGCTATTGATGTGAT	-31	True	NA	13	True	AATAAA	-15	NA	3068493	3115187	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_3068662_3076763_3076988_3077778_3077936_3080978_3081117_3083084_3083314_3085258_3085409_3089580_3089658_3104224_3104316_3105481_3106052_3110802_3110956_3113052
H1_mix_00073641	chr6	+	1569	8	FSM	ENSG00000137274.13	ENST00000424847.6	1563	8	-6	0	-4	0	multi-exon	FALSE	canonical	3	20	junction_1	108.866516281853	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTACCCCTCCCTTCA	NA	False	NA	19	True	NA	NA	NA	3118369	3152669	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_3118848_3119284_3119513_3123656_3123761_3127241_3127409_3129044_3129199_3137361_3137494_3140385_3140510_3152487
H1_mix_00073642	chr6	+	1928	7	FSM	ENSG00000137274.13	ENST00000380379.10	1909	7	-19	0	0	0	multi-exon	FALSE	canonical	3	211	junction_3	26.4428104070317	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTAGCAAGTTAAACCTTG	NA	False	NA	NA	False	AATAAA	-3	NA	3118691	3153578	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_3118848_3123656_3123761_3127241_3127409_3129044_3129199_3137361_3137494_3140385_3140510_3152487
H1_mix_00073643	chr6	+	3750	7	FSM	ENSG00000137274.13	ENST00000490918.5	3723	7	-556	529	-204	0	multi-exon	FALSE	canonical	3	9	junction_5	97.1363589096391	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGATGAATTCAACAAGTT	NA	False	NA	NA	False	NA	NA	NA	3118169	3152533	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_3118848_3123656_3123761_3127241_3127409_3129044_3129199_3137361_3137494_3138040_3140510_3152487
H1_mix_00073644	chr6	+	986	6	FSM	ENSG00000137274.13	ENST00000488487.2	1137	6	151	0	151	0	multi-exon	FALSE	canonical	0	0	junction_4	122.496367293075	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGATGAATTCAACAAGTT	8228	False	NA	NA	False	NA	NA	NA	3126946	3152533	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_3127409_3129044_3129199_3137361_3137423_3138040_3138180_3140385_3140510_3152487
H1_mix_00073646	chr6	+	739	2	FSM	ENSG00000137274.13	ENST00000464040.1	691	2	-66	18	-66	0	multi-exon	FALSE	canonical	3	16	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAAAAACATAA	NA	False	NA	-32	True	NA	NA	NA	3149947	3153028	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_3150146_3152487
H1_mix_00073647	chr6	+	745	3	FSM	ENSG00000180822.12	ENST00000380306.8	726	3	-19	0	-19	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTCATCAGGCCGCGCT	3010	False	NA	15	True	AATAAA	-15	NA	3231787	3267781	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_3232163_3255050_3255230_3267590
H1_mix_00073648	chr6	+	489	2	FSM	ENSG00000180822.12	ENST00000380305.4	489	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTGTCATCAGGCCGCG	-2	True	NA	13	True	AATAAA	-13	NA	3258896	3267779	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_3259197_3267590
H1_mix_00073649	chr6	+	634	4	FSM	ENSG00000180822.12	ENST00000419065.6	629	4	-5	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	276.058367419324	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTCATCAGGCCGCGCT	-16	True	NA	15	True	AATAAA	-15	NA	3258946	3267781	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_3259197_3263683_3263760_3264208_3264326_3267590
H1_mix_00073650	chr6	+	785	3	FSM	ENSG00000180822.12	ENST00000438998.7	785	3	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_2	44.5	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGATTTGTGTGTGCAT	-16	True	NA	NA	False	ATTAAA	-17	NA	3258946	3268049	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_3259197_3263683_3263760_3267590
H1_mix_00073651	chr6	+	4617	2	FSM	ENSG00000180822.12	ENST00000473000.2	4603	2	-14	0	0	0	multi-exon	FALSE	canonical	3	684	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGATTTGTGTGTGCATT	-16	True	NA	NA	False	ATTAAA	-18	NA	3258946	3268050	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_3259197_3263683
H1_mix_00073652	chr6	+	778	4	FSM	ENSG00000180822.12	ENST00000324987.4	778	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	297.870590842548	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGCTGTGAGTGATAGA	14	True	NA	NA	False	NA	NA	NA	3258976	3267920	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_3259197_3263683_3263760_3264173_3264326_3267590
H1_mix_00073653	chr6	+	2716	1	FSM	ENSG00000270504.1	ENST00000603791.1	2761	1	43	2	43	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTCGTTTTCAATAAAT	400	False	NA	-25	True	NA	NA	NA	3751153	3753869	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_3751200_3753900
H1_mix_00073654	chr6	+	1645	2	FSM	ENSG00000145945.7	ENST00000648326.1	1643	2	-2	0	-2	0	multi-exon	FALSE	canonical	3	12	junction_1	0	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGTTTTGGTTAATTTA	-3	True	NA	8	True	AATAAA	-18	NA	3849370	3851317	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_3849487_3849788
H1_mix_00073655	chr6	+	1946	1	FSM	ENSG00000145945.7	ENST00000380274.2	1935	1	-14	3	-1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGTTTTGGTTAATTTA	-2	True	NA	8	True	AATAAA	-18	NA	3849371	3851317	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_3849400_3851300
H1_mix_00073656	chr6	+	1170	1	FSM	ENSG00000216657.1	ENST00000405027.1	1038	1	-108	-24	-108	24	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTGCAAGAAATACTTAAT	NA	False	NA	NA	False	AATAAA	-21	NA	3977953	3979123	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_3978000_3979100
H1_mix_00073657	chr6	+	1458	1	FSM	ENSG00000279926.1	ENST00000623656.1	1458	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGCTTTGTTGGGGTAA	NA	False	NA	NA	False	NA	NA	NA	3982672	3984130	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_3982700_3984100
H1_mix_00073658	chr6	+	6787	16	FSM	ENSG00000112739.17	ENST00000480058.5	6775	16	-12	0	-12	0	multi-exon	FALSE	canonical	2	14	junction_15	82.717887357505	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGTCTCCTGGTTTTTT	18	False	NA	14	True	AATAAA	-18	NA	4021254	4064982	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_4021467_4031558_4032756_4037396_4037571_4040771_4040928_4042486_4042569_4043812_4044024_4047174_4047249_4049015_4049107_4049731_4049880_4051956_4052095_4052719_4052874_4056320_4056436_4057035_4057188_4058727_4058815_4060412_4062300_4063073
H1_mix_00073659	chr6	+	5138	18	NIC	ENSG00000112739.17	novel	6775	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	62	junction_15	96.7124657842115	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGTCTCCTGGTTTTTT	-7	True	NA	14	True	AATAAA	-18	NA	4021299	4064982	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_4021467_4031558_4032756_4037396_4037571_4040771_4040928_4042486_4042569_4043812_4044024_4047174_4047249_4049015_4049107_4049731_4049880_4051956_4052095_4052719_4052874_4056320_4056436_4057035_4057188_4058727_4058815_4060412_4062300_4062556_4062634_4063073_4063120_4064800
H1_mix_00073660	chr6	+	5061	17	NIC	ENSG00000112739.17	novel	6775	16	NA	NA	0	0	intron_retention	FALSE	canonical	2	14	junction_15	92.41345190907	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGTCTCCTGGTTTTTT	-7	True	NA	14	True	AATAAA	-18	NA	4021299	4064982	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_4021467_4031558_4032756_4037396_4037571_4040771_4040928_4042486_4042569_4043812_4044024_4047174_4047249_4049015_4049107_4049731_4049880_4051956_4052095_4052719_4052874_4056320_4056436_4057035_4057188_4058727_4058815_4060412_4062300_4063073_4063120_4064800
H1_mix_00073661	chr6	+	7517	15	FSM	ENSG00000112739.17	ENST00000337659.11	7517	15	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_2	28.8008644994967	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGTCTCCTGGTTTTTTT	-7	True	NA	15	True	AATAAA	-19	NA	4021299	4064983	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_4021467_4031558_4032756_4037396_4037571_4040771_4040928_4042486_4042569_4043812_4044024_4047174_4047249_4049015_4049107_4049731_4049880_4051956_4052095_4052719_4052874_4056320_4056436_4057035_4057188_4058727_4058815_4060412
H1_mix_00073662	chr6	+	6805	17	NIC	ENSG00000112739.17	novel	6775	16	NA	NA	12	-2	intron_retention	FALSE	canonical	3	62	junction_15	89.7464962756207	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATATTGTCTCCTGGTTTT	5	True	NA	12	True	AATAAA	-16	NA	4021311	4064980	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_4021467_4031558_4032756_4037396_4037571_4040771_4040928_4042486_4042569_4043812_4044024_4047174_4047249_4049015_4049107_4049731_4049880_4051956_4052095_4052719_4052874_4056320_4056436_4057035_4057188_4058727_4058815_4060412_4062300_4062556_4062634_4063073
H1_mix_00073663	chr6	+	6998	16	NIC	ENSG00000112739.17	novel	7517	15	NA	NA	12	0	intron_retention	FALSE	canonical	3	124	junction_15	57.6219865444895	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGTCTCCTGGTTTTTTT	5	True	NA	15	True	AATAAA	-19	NA	4021311	4064983	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_4021467_4031558_4032756_4037396_4037571_4040771_4040928_4042486_4042569_4043812_4044024_4047174_4047249_4049015_4049107_4049731_4049880_4051956_4052095_4052719_4052874_4056320_4056436_4057035_4057188_4058727_4058815_4060412_4061148_4061654
H1_mix_00073665	chr6	+	3299	7	NNC	ENSG00000153046.18	novel	690	4	NA	NA	-63	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	122.916525423648	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAATGTTTCTCTGATT	NA	False	NA	18	True	AATAAA	-20	NA	4772907	4955544	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_4773174_4891712_4892380_4935580_4935772_4937564_4937738_4943545_4943757_4952265_4952410_4953897
H1_mix_00073666	chr6	+	3237	7	NIC	ENSG00000153046.18	novel	690	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	250	junction_1	19.1985242488409	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAATGTTTCTCTGATT	11	False	NA	18	True	AATAAA	-20	NA	4773040	4955544	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_4773179_4891712_4892380_4935514_4935772_4937564_4937738_4943545_4943757_4952265_4952410_4953897
H1_mix_00073667	chr6	+	3503	7	FSM	ENSG00000153046.18	ENST00000397588.8	3503	7	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	87.3606827405149	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAATGTTTCTCTGATT	6	True	NA	18	True	AATAAA	-20	NA	4776403	4955544	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_4776808_4891712_4892380_4935514_4935772_4937564_4937738_4943545_4943757_4952265_4952410_4953897
H1_mix_00073668	chr6	+	1523	3	FSM	ENSG00000272142.4	ENST00000671039.1	1732	3	46	163	8	-163	multi-exon	FALSE	canonical	2	4	junction_2	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCCACTTTCCCTAATCA	17	True	NA	NA	False	NA	NA	NA	5003823	5043799	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_5003960_5021380_5021474_5042505
H1_mix_00073669	chr6	+	261	1	FSM	ENSG00000219607.4	ENST00000405617.4	4147	1	-6	3892	-6	-3892	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGGCGACGGCGGTGGCG	NA	False	NA	NA	False	NA	NA	NA	5085334	5085595	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_5085300_5085600
H1_mix_00073670	chr6	+	1832	7	FSM	ENSG00000145982.13	ENST00000324331.10	1692	7	19	-159	19	5	multi-exon	TRUE	canonical	2	8	junction_1	37.6979958205856	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGCATTTGTCTTTTATT	48	False	NA	24	True	AATAAA	-25	NA	5261062	5771588	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_5261359_5368549_5369183_5404541_5404702_5431040_5431173_5545179_5545341_5613168_5613321_5771290
H1_mix_00073671	chr6	+	1679	7	FSM	ENSG00000145982.13	ENST00000274680.9	1679	7	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	13.8764388643324	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGACATAGCATTTGTCTT	-17	True	NA	19	True	AATAAA	-20	NA	5261512	5771583	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_5261661_5368549_5369183_5404541_5404702_5431040_5431173_5545179_5545341_5613168_5613321_5771290
H1_mix_00073672	chr6	+	8859	12	FSM	ENSG00000124782.21	ENST00000349384.10	7440	12	-469	-950	-35	0	multi-exon	FALSE	canonical	3	43	junction_1	11.0901639093924	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGCCGGTCACGTGGCCG	NA	False	NA	12	True	AATAAA	-22	NA	7107561	7251980	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_7108061_7176654_7176774_7181123_7181247_7181869_7182083_7187433_7187524_7189158_7189323_7210803_7210949_7211572_7211710_7226466_7226657_7228996_7231908_7246423_7247222_7248510
H1_mix_00073673	chr6	+	5847	12	FSM	ENSG00000124782.21	ENST00000379933.7	5826	12	-21	0	-21	0	multi-exon	FALSE	canonical	2	6	junction_1	18.1913611319964	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTCTGGAGAGGACCTC	NA	False	NA	NA	False	AAAACA	-13	NA	7107575	7249274	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_7107769_7176654_7176774_7181123_7181247_7181869_7182083_7187433_7187524_7189158_7189323_7210803_7210949_7211572_7211710_7226466_7226657_7228996_7231908_7246423_7247222_7248510
H1_mix_00073674	chr6	+	1021	7	FSM	ENSG00000124782.21	ENST00000471433.5	1021	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	23.1978207788768	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGCGATTGTCCTCCAAG	38	False	NA	NA	False	NA	NA	NA	7107820	7210871	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_7108065_7176654_7176774_7181123_7181247_7181869_7182083_7187433_7187524_7189158_7189323_7210803
H1_mix_00073675	chr6	+	8625	13	FSM	ENSG00000124782.21	ENST00000379938.7	8625	13	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_10	17.9371975390682	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGCCGGTCACGTGGCCG	4	True	NA	12	True	AATAAA	-22	NA	7107960	7251980	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_7108061_7176654_7176774_7181123_7181247_7181869_7182083_7187433_7187524_7189158_7189323_7210803_7210949_7211572_7211710_7226466_7226657_7228996_7231908_7240437_7240603_7246423_7247222_7248510
H1_mix_00073676	chr6	+	2514	17	FSM	ENSG00000124784.9	ENST00000379834.7	2498	17	-16	0	-1	0	multi-exon	TRUE	canonical	3	275	junction_3	42.0520046341432	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTGGCATATTCATTCA	-37	True	NA	17	True	CATAAA	-17	NA	7389791	7418037	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_7390074_7393098_7393304_7395052_7395144_7396702_7396773_7398697_7398741_7400957_7401051_7402602_7402716_7402816_7402898_7403940_7404028_7404417_7404556_7404917_7405022_7405248_7405356_7410385_7410452_7411331_7411452_7412888_7412943_7414237_7414391_7417330
H1_mix_00073677	chr6	+	2377	17	NIC	ENSG00000124784.9	novel	2498	17	NA	NA	17	-136	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	89.5495672798032	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGCTGGCTGTTGATTTT	-4	True	NA	15	True	TATAAA	-18	NA	7389824	7417901	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_7390074_7393098_7393304_7395020_7395144_7396702_7396773_7398697_7398741_7400957_7401051_7402602_7402716_7402816_7402898_7403940_7404028_7404417_7404556_7404917_7405022_7405248_7405356_7410385_7410452_7411331_7411452_7412888_7412943_7414237_7414391_7417330
H1_mix_00073678	chr6	+	7812	24	FSM	ENSG00000096696.15	ENST00000418664.2	7812	24	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_23	35.3794446532129	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTTGTGTTTTAATTT	-12	True	NA	20	True	AATAAA	-15	NA	7541616	7586572	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_7542086_7555717_7555821_7558115_7558265_7559225_7559401_7562651_7562781_7563735_7563787_7565358_7565521_7566376_7566482_7567353_7567450_7567780_7567907_7568436_7568590_7569185_7569341_7570436_7570564_7571382_7571585_7571841_7572069_7574085_7574253_7574656_7574796_7575294_7575489_7576293_7576457_7576958_7577043_7577778_7577887_7578463_7578563_7579274_7579773_7582641
H1_mix_00073679	chr6	+	9881	24	FSM	ENSG00000096696.15	ENST00000379802.8	9697	24	-326	142	-272	0	multi-exon	TRUE	canonical	3	148	junction_18	24.8683490125238	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTTGTGTTTTAATTT	6	True	NA	20	True	AATAAA	-15	NA	7541344	7586572	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_7542086_7555717_7555821_7558115_7558265_7559225_7559401_7562651_7562781_7563735_7563787_7565358_7565521_7566376_7566482_7567353_7567450_7567780_7567907_7568436_7568590_7569185_7569341_7570436_7570564_7571382_7571585_7571841_7572069_7574085_7574253_7574656_7574796_7575294_7575489_7576293_7576457_7576958_7577043_7577778_7577887_7578463_7578563_7579274_7581570_7582641
H1_mix_00073681	chr6	+	4179	9	FSM	ENSG00000168566.13	ENST00000342415.6	4174	9	-5	0	-5	0	multi-exon	FALSE	canonical	3	93	junction_4	8.45576726264388	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTTATTAGTGATTGT	0	True	NA	15	True	ATTAAA	-22	NA	7590192	7611967	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_7590414_7593733_7593848_7594098_7594160_7595026_7595102_7601335_7601525_7602622_7602745_7605397_7605487_7606030_7606196_7608824
H1_mix_00073683	chr6	+	3815	7	FSM	ENSG00000153162.9	ENST00000283147.7	3784	7	-31	0	-31	0	multi-exon	FALSE	canonical	2	6	junction_1	3.4960294939005	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGGTCGAGATGCTGC	NA	False	NA	4	True	AATAAA	-17	NA	7726067	7881728	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_7727620_7845139_7845333_7861450_7861600_7862300_7862499_7879073_7879151_7879990_7880102_7880193
H1_mix_00073684	chr6	+	474	2	FSM	ENSG00000285219.3	ENST00000645808.1	2836	2	916	1446	916	0	multi-exon	FALSE	canonical	2	3	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACTGTAATAATTTATTG	NA	False	NA	NA	False	AATAAA	-24	NA	8784190	8785443	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_8784338_8785116
H1_mix_00073685	chr6	+	2562	1	FSM	ENSG00000285278.1	ENST00000645232.1	3427	1	20	845	20	-845	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGTGGAGATGGGGAATAA	NA	False	NA	NA	False	TTTAAA	-2	NA	10404521	10407083	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_10404500_10407100
H1_mix_00073686	chr6	+	585	4	FSM	ENSG00000111846.20	ENST00000474518.1	580	4	-5	0	-5	0	multi-exon	FALSE	canonical	0	0	junction_3	3.85861230093008	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGACACGGAGGCTGCCAC	90	False	NA	NA	False	TATAAA	-18	NA	10521479	10621422	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_10521595_10527473_10527661_10528630_10528842_10621350
H1_mix_00073687	chr6	+	836	2	FSM	ENSG00000111846.20	ENST00000483204.2	944	2	108	0	108	0	multi-exon	FALSE	canonical	2	9	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGTGTGCACCTGGATC	6084	False	NA	NA	False	NA	NA	NA	10527473	10529279	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_10527661_10528630
H1_mix_00073688	chr6	+	4602	3	FSM	ENSG00000111846.20	ENST00000316170.9	4579	3	-23	0	-23	0	multi-exon	TRUE	canonical	3	130	junction_1	65	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGGGATACTGTGTATT	NA	False	NA	12	True	AATAAA	-19	NA	10555785	10629368	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_10557343_10621350_10621444_10626416
H1_mix_00073689	chr6	+	4221	3	FSM	ENSG00000111846.20	ENST00000265012.5	4200	3	-21	0	-21	0	multi-exon	FALSE	canonical	3	128	junction_1	66	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGGGATACTGTGTATT	13	False	NA	12	True	AATAAA	-19	NA	10585738	10629368	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_10586915_10621350_10621444_10626416
H1_mix_00073690	chr6	+	1225	1	FSM	ENSG00000205318.5	ENST00000379591.4	934	1	2	-293	2	293	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGGGATTACAGGCATGA	NA	False	NA	NA	False	NA	NA	NA	10633763	10634988	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_10633800_10635000
H1_mix_00073691	chr6	+	1523	10	FSM	ENSG00000111845.5	ENST00000379568.4	1523	10	0	0	0	0	multi-exon	FALSE	canonical	3	628	junction_1	51.4186400365653	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGGATGAAGGAGTCAT	24	True	NA	29	True	TATAAA	-23	NA	10694971	10709782	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_10695070_10697323_10697487_10702368_10702490_10702564_10702640_10703404_10703458_10704506_10704653_10704746_10704845_10707414_10707515_10708952_10709077_10709237
H1_mix_00073692	chr6	+	1501	10	NNC	ENSG00000111845.5	novel	1523	10	NA	NA	4	-21	at_least_one_novel_splicesite	FALSE	canonical	3	146	junction_1	189.932736631799	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGAACACATTCTTTATC	28	True	NA	8	True	AATAAA	-37	NA	10694975	10709761	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_10695070_10697320_10697487_10702368_10702490_10702564_10702640_10703404_10703458_10704506_10704653_10704746_10704845_10707414_10707515_10708952_10709077_10709237
H1_mix_00073693	chr6	+	1163	6	FSM	ENSG00000111843.14	ENST00000541412.5	1177	6	14	0	14	0	multi-exon	FALSE	canonical	3	37	junction_1	406.059897059535	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATAATATTTCCTATGG	1354	False	NA	NA	False	AATAAA	-8	NA	10722928	10731119	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_10723242_10724555_10724634_10724960_10725038_10725906_10726009_10728639_10728728_10730614
H1_mix_00073694	chr6	+	1016	6	FSM	ENSG00000111843.14	ENST00000229563.6	1016	6	0	0	0	0	multi-exon	FALSE	canonical	3	844	junction_1	89.824272888791	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCCTATGGGGTCTTCA	-40	True	NA	NA	False	AATAAA	-16	NA	10723069	10731127	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_10723242_10724569_10724634_10724960_10725038_10725906_10726009_10728639_10728728_10730614
H1_mix_00073695	chr6	+	472	4	FSM	ENSG00000111843.14	ENST00000466421.5	472	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	482.718229290016	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGACATTTTACCTAAAAA	-1	True	NA	NA	False	AATATA	-30	NA	10723108	10730763	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_10723242_10725906_10726009_10728639_10728728_10730614
H1_mix_00073696	chr6	+	797	5	FSM	ENSG00000137210.14	ENST00000379530.7	787	5	-10	0	0	0	multi-exon	FALSE	canonical	3	97	junction_3	541.36280579663	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATCAATGAAAATAAAGTT	-12	True	NA	NA	False	NA	NA	NA	10747800	10756947	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_10747882_10749201_10749269_10749621_10749699_10755141_10755233_10756466
H1_mix_00073697	chr6	+	746	4	FSM	ENSG00000137210.14	ENST00000473276.5	730	4	-16	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	571.104388200811	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATATTTCCTATGGTG	-12	True	NA	NA	False	AATAAA	-10	NA	10747800	10756973	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_10747882_10749201_10749269_10755141_10755233_10756466
H1_mix_00073698	chr6	+	933	6	FSM	ENSG00000137210.14	ENST00000379542.10	929	6	-4	0	0	0	multi-exon	FALSE	canonical	3	1168	junction_5	116.286886620977	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTATGGTGTCTTCATT	-12	True	NA	NA	False	AATAAA	-18	NA	10747800	10756981	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_10747882_10749201_10749269_10749621_10749699_10751132_10751235_10755141_10755233_10756466
H1_mix_00073699	chr6	+	512	5	FSM	ENSG00000137210.14	ENST00000463100.5	502	5	-10	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	659.874372513435	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTATGTGAATTAATAAAT	-12	True	NA	-10	True	NA	NA	NA	10747800	10829165	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_10747882_10749201_10749269_10749621_10749699_10770076_10770205_10829006
H1_mix_00073700	chr6	+	2913	30	FSM	ENSG00000153157.13	ENST00000283141.11	2909	30	-4	0	-4	0	multi-exon	FALSE	canonical	0	0	junction_4	8.21515087651469	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATTGGATGTGTCTCTT	-19	True	NA	141	True	AATAAA	-25	NA	10887047	10974309	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_10887136_10891512_10891582_10893866_10894005_10894084_10894205_10898010_10898116_10898823_10898849_10902676_10902763_10902874_10902964_10906019_10906055_10907541_10907685_10910147_10910201_10910823_10910870_10912672_10912766_10912866_10912928_10924495_10924642_10926338_10926433_10927239_10927368_10928402_10928451_10930369_10930515_10931439_10931490_10935057_10935188_10942458_10942530_10942676_10942747_10955115_10955218_10956135_10956243_10958783_10958876_10961304_10961405_10961499_10961559_10963781_10963844_10973951
H1_mix_00073701	chr6	+	4910	2	FSM	ENSG00000224531.6	ENST00000416247.4	4887	2	-23	0	-23	0	multi-exon	FALSE	canonical	3	102	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGTTATGTGTCTCTGG	8	True	NA	NA	False	AATAAA	-16	NA	11093810	11138733	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_11094390_11134402
H1_mix_00073702	chr6	+	8891	3	FSM	ENSG00000205269.6	ENST00000379426.2	8891	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	8.5	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGTGTTTGACTCTTGGT	-19	True	NA	NA	False	AATAAA	-20	NA	11537748	11583524	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_11538375_11565665_11565837_11575430
H1_mix_00073703	chr6	+	603	4	FSM	ENSG00000095951.17	ENST00000487103.5	585	4	-18	0	-18	0	multi-exon	FALSE	canonical	2	7	junction_1	3.2659863237109	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCGTAGATGGAGATCCGAA	7	True	NA	NA	False	NA	NA	NA	12011981	12120222	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_12012055_12015525_12015669_12089183_12089238_12119889
H1_mix_00073704	chr6	+	8871	9	NIC	ENSG00000095951.17	novel	2085	4	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	1	6	junction_5	10.4253297309965	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTGCTTCAGTTGTGCCT	7	True	NA	7	True	AGTAAA	-20	NA	12011981	12164999	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_12012055_12015525_12015669_12089183_12089238_12119889_12125871_12129758_12129893_12130766_12130943_12135790_12135893_12161438_12161930_12163282
H1_mix_00073705	chr6	+	576	4	FSM	ENSG00000095951.17	ENST00000478545.1	576	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	3.68178700572909	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCCCAAAGAAGCCCTTG	196	False	NA	NA	False	NA	NA	NA	12012701	12120180	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_12012790_12015525_12015669_12089183_12089238_12119889
H1_mix_00073706	chr6	+	2022	5	FSM	ENSG00000078401.7	ENST00000379375.6	2035	5	0	13	0	-13	multi-exon	FALSE	canonical	1	2	junction_2	1.08972473588517	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTACTGTACTGATTT	0	True	NA	NA	False	AATAAA	-7	NA	12290360	12297181	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_12290694_12292340_12292510_12293940_12294097_12294260_12294405_12295961
H1_mix_00073707	chr6	+	728	1	FSM	ENSG00000212802.4	ENST00000391491.2	615	1	-47	-66	-47	66	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGATGGACAGAAAATGC	NA	False	NA	NA	False	AATAAA	-32	NA	12514062	12514790	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_12514100_12514800
H1_mix_00073708	chr6	+	2887	13	FSM	ENSG00000112137.19	ENST00000675203.2	3045	13	158	0	158	0	multi-exon	FALSE	canonical	2	6	junction_1	4.94061961926055	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGAGTGTCCAGTGTCAT	82	False	NA	NA	False	NA	NA	NA	13013711	13287837	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_13014140_13053364_13053530_13160203_13160285_13182518_13182687_13184798_13185006_13205814_13206137_13227815_13228064_13230036_13230194_13272859_13272916_13278267_13278330_13283421_13283563_13286145_13286223_13287062
H1_mix_00073709	chr6	+	799	1	FSM	ENSG00000218265.1	ENST00000406274.1	780	1	49	-68	49	68	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAGAAAAAAAAACAATTGAA	71	False	NA	NA	False	ATTAAA	-20	NA	13521314	13522113	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_13521300_13522100
H1_mix_00073712	chr6	+	2360	10	FSM	ENSG00000124523.17	ENST00000379262.8	2339	10	-21	0	0	0	multi-exon	FALSE	canonical	3	17	junction_9	47.7912125813941	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGTGTTTTGACTGTTA	-13	True	NA	9	True	AATAAA	-24	NA	13574579	13605739	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_13574625_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13599031_13599156_13600833_13600950_13604475
H1_mix_00073714	chr6	+	4559	10	NIC	ENSG00000124523.17	novel	4659	10	NA	NA	8	51	combination_of_known_junctions	FALSE	canonical	3	130	junction_7	20.15556780595	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTACAGGCCACGCCCTTC	230	False	NA	NA	False	AAGAAA	-11	NA	13574536	13615209	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_13574625_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13599031_13599156_13600833_13600950_13611789
H1_mix_00073717	chr6	+	3411	3	FSM	ENSG00000180537.13	ENST00000537663.5	3382	3	-29	0	-29	0	multi-exon	FALSE	canonical	1	1	junction_1	17	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTTTGATTTCTCTGAC	NA	False	NA	9	True	ATTAAA	-21	NA	13924416	13980008	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_13924573_13974209_13974365_13976908
H1_mix_00073718	chr6	+	841	2	FSM	ENSG00000180537.13	ENST00000420478.2	826	2	-15	0	14	0	multi-exon	FALSE	canonical	2	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGTCACACAACTGGACT	333	False	NA	NA	False	NA	NA	NA	13924880	13977606	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_13925024_13976908
H1_mix_00073719	chr6	+	3385	3	FSM	ENSG00000180537.13	ENST00000488300.6	3629	3	-58	302	-2	0	multi-exon	FALSE	canonical	3	20	junction_1	7.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTTTGATTTCTCTGAC	346	False	NA	9	True	ATTAAA	-21	NA	13924893	13980008	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_13925024_13974209_13974365_13976908
H1_mix_00073721	chr6	+	6591	18	FSM	ENSG00000008083.14	ENST00000341776.7	6003	18	-590	2	-590	0	multi-exon	TRUE	canonical	3	339	junction_2	122.553201497276	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATGACTGAATGGAATGA	9	True	NA	33	True	AATAAA	-35	NA	15245478	15522040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_15246585_15374116_15374253_15410223_15410366_15452005_15452176_15468541_15468719_15487306_15487543_15496131_15497171_15500906_15501410_15504499_15504593_15507135_15507255_15507345_15507417_15508339_15508455_15511295_15511402_15512207_15512391_15512914_15513046_15513238_15513423_15517160_15517269_15520068
H1_mix_00073722	chr6	+	5573	18	FSM	ENSG00000008083.14	ENST00000397311.4	5595	18	22	0	22	0	multi-exon	FALSE	canonical	2	18	junction_1	170.673791932432	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATGACTGAATGGAATGA	1	True	NA	33	True	AATAAA	-35	NA	15248876	15522040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_15248965_15374116_15374253_15410223_15410366_15452005_15452176_15468541_15468719_15487306_15487543_15496131_15497171_15500906_15501410_15504499_15504593_15507135_15507255_15507345_15507417_15508339_15508455_15511295_15511402_15512207_15512391_15512914_15513046_15513238_15513423_15517160_15517269_15520068
H1_mix_00073723	chr6	+	732	1	FSM	ENSG00000214027.3	ENST00000448802.1	534	1	38	-236	38	236	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGATTTCTAACATTAAAA	NA	False	NA	NA	False	NA	NA	NA	15934819	15935551	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_15934800_15935600
H1_mix_00073726	chr6	+	798	2	ISM	ENSG00000007944.15	ENST00000356840.8	3072	7	-3	17221	-3	-17221	5prime_fragment	FALSE	canonical	3	104	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GGAAAAAAAAAAAAAAAAAA	-4	True	NA	NA	False	NA	NA	NA	16129082	16131027	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_16129410_16130556
H1_mix_00073729	chr6	+	1508	9	FSM	ENSG00000137198.10	ENST00000259727.5	1508	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	9.4339811320566	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTTGCTGGAGTTTGTA	-3	True	NA	29	True	AATATA	-23	NA	16238586	16295549	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_16238781_16246841_16246962_16250283_16250368_16254561_16254736_16274414_16274497_16278783_16278891_16285792_16285836_16290461_16290622_16295005
H1_mix_00073731	chr6	+	3136	4	FSM	ENSG00000112183.15	ENST00000379052.10	2684	4	-457	5	-457	0	multi-exon	FALSE	canonical	3	23	junction_3	1.69967317119759	130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACTTCTGTTGCATTGG	218	False	NA	3	True	ATTAAA	-11	NA	17280903	17293866	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_17281750_17282804_17282929_17284656_17284712_17291755
H1_mix_00073732	chr6	+	2925	13	FSM	ENSG00000112186.13	ENST00000229922.7	2925	13	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_5	13.1431752463229	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTGATGAATTCTGGAT	5	True	NA	16	True	AATAAA	-22	NA	17393594	17557780	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_17393747_17421554_17421677_17426589_17426691_17462995_17463074_17507168_17507313_17507640_17507727_17513848_17513955_17539268_17539459_17540972_17541149_17542836_17542961_17543060_17543144_17551463_17551605_17556358
H1_mix_00073734	chr6	+	4536	22	FSM	ENSG00000165097.16	ENST00000650836.2	4538	22	2	0	2	0	multi-exon	FALSE	canonical	2	10	junction_9	6.28607502572352	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTACTGTAGTGGTGAT	-12	True	NA	16	True	AATAAA	-21	NA	18155423	18223854	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_18155572_18155882_18155927_18159882_18159983_18161326_18161455_18162834_18162925_18166266_18166379_18171362_18171480_18185771_18185811_18187791_18188003_18191196_18191382_18197056_18197234_18197586_18197662_18200438_18200577_18201485_18201658_18205536_18205665_18207397_18207530_18208131_18208207_18212487_18212605_18213655_18213782_18215006_18215130_18217732_18217886_18221908
H1_mix_00073735	chr6	+	564	3	ISM	ENSG00000137393.10	ENST00000259939.4	5032	8	19	41189	19	25586	5prime_fragment	FALSE	canonical	3	24	junction_1	5.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGGTATGAATGACTACCA	-10	True	NA	NA	False	NA	NA	NA	18387368	18427681	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_18387631_18399498_18399700_18427580
H1_mix_00073738	chr6	+	5036	7	FSM	ENSG00000112242.16	ENST00000346618.8	5036	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	34.0379689954224	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTGTGGATGGGTTTT	-18	True	NA	16	True	AATAAA	-45	NA	20401878	20493714	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_20402626_20479845_20479958_20481205_20481426_20482761_20482921_20486688_20486804_20488112_20488249_20490167
H1_mix_00073739	chr6	+	4566	7	NIC	ENSG00000112242.16	novel	4425	7	NA	NA	-123	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_1	20.9953698599371	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTGTGGATGGGTTTT	38	False	NA	16	True	AATAAA	-45	NA	20403555	20493714	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_20403833_20479845_20479958_20481205_20481426_20482761_20482921_20486688_20486804_20488112_20488249_20490167
H1_mix_00073740	chr6	+	1697	6	FSM	ENSG00000145996.11	ENST00000613575.4	1673	6	-24	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	94.5312646694204	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGTGTTAAGATGCCTA	-21	True	NA	NA	False	AATAAA	-16	NA	20534456	20559672	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_20534575_20535086_20535200_20535350_20535395_20546345_20546524_20548592_20548706_20558541
H1_mix_00073742	chr6	+	3209	15	NIC	ENSG00000145996.11	novel	3272	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	23	junction_12	44.6501136959496	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTATGTTTTTGAGAATTT	-21	True	NA	23	True	AATAAA	-23	NA	20534456	21232404	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_20534575_20535350_20535395_20546345_20546524_20548592_20548706_20649292_20649378_20739518_20739616_20758594_20758644_20781144_20781266_20846074_20846179_20955418_20955586_21000226_21000373_21065047_21065229_21198020_21198105_21201109_21201275_21230847
H1_mix_00073743	chr6	+	1573	5	NIC	ENSG00000145996.11	novel	1673	6	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_4	82.0761841218267	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGTGTTAAGATGCCTA	-10	True	NA	NA	False	AATAAA	-16	NA	20534467	20559672	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_20534575_20535350_20535395_20546345_20546524_20548592_20548706_20558541
H1_mix_00073754	chr6	+	1383	1	FSM	ENSG00000146049.2	ENST00000274766.2	1383	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGTTGCCCAGGTTTTTC	NA	False	NA	NA	False	ATTAAA	-18	NA	24356902	24358285	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_24356900_24358300
H1_mix_00073755	chr6	+	3821	9	FSM	ENSG00000124532.15	ENST00000274747.11	3821	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	199.241020813988	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGTTCAGATTTCTGTT	NA	False	NA	10	True	AATAAA	-22	NA	24402907	24426194	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_24403237_24405167_24405242_24412221_24412396_24415032_24415164_24416396_24416514_24418083_24418237_24418460_24418579_24422936_24423051_24423583
H1_mix_00073756	chr6	+	1758	10	FSM	ENSG00000124532.15	ENST00000378353.5	1740	10	-18	0	0	0	multi-exon	TRUE	canonical	3	564	junction_2	44.0807340128441	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGCTTATAGTCCTTTC	-21	True	NA	6	True	AATAAA	-15	NA	24402935	24423476	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_24403237_24405167_24405242_24408407_24408445_24409460_24409574_24412221_24412396_24415032_24415164_24416396_24416514_24418083_24418237_24418460_24418579_24422936
H1_mix_00073757	chr6	+	3939	11	FSM	ENSG00000124532.15	ENST00000378386.8	3939	11	0	0	0	0	multi-exon	FALSE	canonical	3	564	junction_2	44.1317346135409	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTATAAGTTCAGATTTC	-21	True	NA	6	True	AATAAA	-18	NA	24402935	24426190	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_24403237_24405167_24405242_24408407_24408445_24409460_24409574_24412221_24412396_24415032_24415164_24416396_24416514_24418083_24418237_24418460_24418579_24422936_24423051_24423583
H1_mix_00073758	chr6	+	5127	10	FSM	ENSG00000112294.14	ENST00000357578.8	5131	10	0	4	0	-4	multi-exon	FALSE	canonical	3	13	junction_7	6.92998494645008	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTAAGGTGTCTGGTTG	-1	True	NA	28	True	AATAAA	-28	NA	24494968	24537203	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_24495351_24502522_24502607_24503262_24503434_24504868_24504986_24515166_24515311_24520400_24520545_24522766_24522926_24527996_24528167_24532118_24532178_24533506
H1_mix_00073759	chr6	+	4927	11	FSM	ENSG00000112294.14	ENST00000348925.2	2266	11	243	-2904	-22	0	multi-exon	FALSE	canonical	2	3	junction_5	11.216505694734	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAAGGTGTCTGGTTGTGCT	242	False	NA	32	True	AATAAA	-32	NA	24495211	24537207	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_24495351_24502522_24502607_24503262_24503434_24504868_24504986_24511829_24511869_24515166_24515311_24520400_24520545_24522766_24522926_24527996_24528167_24532118_24532178_24533506
H1_mix_00073760	chr6	+	4041	3	FSM	ENSG00000112304.11	ENST00000230048.5	4041	3	0	0	0	0	multi-exon	FALSE	canonical	3	989	junction_1	18.5	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGCTTTTCTTCATTTA	-7	True	NA	NA	False	AATAAA	-17	NA	24667076	24705046	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_24667345_24697882_24698068_24701458
H1_mix_00073761	chr6	+	1145	7	FSM	ENSG00000112312.10	ENST00000356509.7	1133	7	-12	0	-12	0	multi-exon	FALSE	canonical	3	511	junction_1	222.374871182275	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTGTCTGTTTCTATG	NA	False	NA	32	True	AATATA	-15	NA	24774918	24786095	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_24775113_24777221_24777298_24780662_24780741_24781476_24781622_24784086_24784170_24784443_24784555_24785637
H1_mix_00073763	chr6	+	1055	7	FSM	ENSG00000112312.10	ENST00000620958.4	1039	7	-16	0	-16	0	multi-exon	FALSE	canonical	3	42	junction_1	394.248088841982	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAATTTGTCTGTTTCTA	10	False	NA	30	True	AATATA	-13	NA	24775396	24786093	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_24775503_24777221_24777298_24780662_24780741_24781476_24781622_24784086_24784170_24784443_24784555_24785637
H1_mix_00073766	chr6	+	5751	37	FSM	ENSG00000079691.18	ENST00000329474.7	5485	37	-266	0	30	0	multi-exon	FALSE	canonical	3	91	junction_2	14.6055122352597	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGCCTTCTCCAGTTAC	-17	True	NA	17	True	AATAAA	-19	NA	25279107	25620530	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_25279836_25284811_25284910_25420113_25420165_25426500_25426561_25435482_25435605_25449897_25449996_25450338_25450410_25450637_25450712_25465872_25465949_25471168_25471258_25472426_25472522_25482256_25482344_25488481_25488586_25491731_25491810_25491947_25492025_25495110_25495216_25500165_25500236_25509655_25509738_25510506_25510607_25510707_25510763_25515674_25515848_25517346_25517416_25520243_25520338_25528794_25528894_25537854_25537984_25539946_25540079_25550909_25551086_25554008_25554097_25556700_25556851_25580923_25580991_25581242_25581440_25594414_25594528_25600313_25600747_25604811_25604894_25606060_25606274_25610049_25610182_25619446
H1_mix_00073767	chr6	+	7049	37	NNC	ENSG00000079691.18	novel	5485	37	NA	NA	-1286	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_34	20.1220619356767	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGCCTTCTCCAGTTAC	NA	False	NA	17	True	AATAAA	-19	NA	25277791	25620530	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_25279836_25284811_25284910_25420113_25420165_25426500_25426561_25435482_25435605_25449897_25449996_25450338_25450410_25450637_25450712_25465872_25465949_25471168_25471258_25472426_25472522_25482256_25482344_25488481_25488586_25491731_25491810_25491947_25492025_25495110_25495216_25500165_25500236_25509655_25509738_25510506_25510607_25510707_25510763_25515674_25515848_25517346_25517416_25520243_25520338_25528794_25528894_25537854_25537984_25539946_25540079_25550909_25551086_25554008_25554097_25556700_25556851_25580923_25580991_25581242_25581440_25594414_25594528_25600313_25600747_25604811_25604894_25606078_25606274_25610049_25610182_25619446
H1_mix_00073768	chr6	+	5130	37	NNC	ENSG00000079691.18	novel	3201	26	NA	NA	792	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	23.3872888077643	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGCCTTCTCCAGTTAC	487	False	NA	17	True	AATAAA	-19	NA	25280165	25620530	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_25280273_25284811_25284910_25420113_25420165_25426500_25426561_25435482_25435605_25449897_25449996_25450338_25450410_25450637_25450712_25465872_25465949_25471168_25471258_25472426_25472522_25482256_25482344_25488481_25488586_25491731_25491810_25491947_25492025_25495110_25495216_25500165_25500236_25509655_25509738_25510506_25510607_25510707_25510763_25515674_25515848_25517346_25517416_25520243_25520338_25528794_25528894_25537854_25537984_25539946_25540079_25550909_25551086_25554008_25554097_25556700_25556851_25580923_25580991_25581242_25581440_25594414_25594528_25600313_25600747_25604811_25604894_25606060_25606274_25610049_25610182_25619446
H1_mix_00073769	chr6	+	1291	3	FSM	ENSG00000079691.18	ENST00000476458.1	1291	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGCCTTCTCCAGTTAC	9789	False	NA	17	True	AATAAA	-19	NA	25610121	25620530	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_25610182_25612739_25612887_25619446
H1_mix_00073772	chr6	+	405	1	FSM	ENSG00000197061.5	ENST00000377803.4	405	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTCGTTTAAAGAGCTG	-1	True	NA	4	True	AAAACA	-40	NA	26103932	26104337	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26103900_26104300
H1_mix_00073775	chr6	+	1672	3	NNC	ENSG00000180573.10	novel	1668	2	NA	NA	-5	-7	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	7.5	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAAAGCATGTGTCATTA	18	False	NA	8	True	AATAAA	-17	NA	26124197	26139109	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_26124750_26127697_26127762_26138053
H1_mix_00073777	chr6	+	800	2	FSM	ENSG00000158373.9	ENST00000289316.2	789	2	-11	0	-11	0	multi-exon	FALSE	canonical	2	6	junction_1	0	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCTTCATTGTTGATC	8	True	NA	13	True	AATAAA	-20	NA	26158134	26171349	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26158560_26170974
H1_mix_00073781	chr6	+	384	1	FSM	ENSG00000274618.2	ENST00000244537.6	401	1	0	17	0	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCCTTTTCAGGGCCACC	0	True	NA	NA	False	CATAAA	-1	NA	26240392	26240776	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26240400_26240800
H1_mix_00073782	chr6	+	776	2	Genic_Genomic	ENSG00000275713.3	novel	462	1	NA	NA	-3	9539	multi-exon	FALSE	canonical	1	2	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTTGTTTTCAGAAGTTC	-3	True	NA	NA	False	NA	NA	NA	26251610	26261614	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr6_+_26252144_26261371
H1_mix_00073784	chr6	+	525	1	FSM	ENSG00000278588.2	ENST00000377733.4	482	1	59	-102	59	102	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCCGGGCGCAGTGGCTCA	54	False	NA	NA	False	NA	NA	NA	26272989	26273514	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26273000_26273500
H1_mix_00073788	chr6	+	3601	8	FSM	ENSG00000124508.17	ENST00000356709.9	3583	8	-18	0	-6	0	multi-exon	FALSE	canonical	3	30	junction_1	5.74278606921194	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAGCTTGAATGGTAGTA	NA	False	NA	6	True	AATAAA	-16	NA	26383089	26394874	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26383182_26383791_26383916_26385014_26385363_26388012_26388295_26390004_26390212_26390686_26390708_26390802_26390830_26392374
H1_mix_00073789	chr6	+	1796	8	FSM	ENSG00000124508.17	ENST00000469230.5	1790	8	-6	0	-6	0	multi-exon	FALSE	canonical	0	0	junction_7	15.8873585993804	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAGCTTGAATGGTAGTA	NA	False	NA	6	True	AATAAA	-16	NA	26383089	26394874	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26383300_26383791_26383916_26385014_26385363_26388012_26388295_26390004_26390212_26390686_26390708_26390802_26390830_26394297
H1_mix_00073790	chr6	+	3253	7	FSM	ENSG00000124508.17	ENST00000352867.6	3241	7	-12	0	-6	0	multi-exon	FALSE	canonical	3	10	junction_2	11.0867789130417	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAGCTTGAATGGTAGTA	NA	False	NA	6	True	AATAAA	-16	NA	26383089	26394874	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26383182_26383791_26383916_26388012_26388295_26390004_26390212_26390686_26390708_26390802_26390830_26392374
H1_mix_00073793	chr6	+	2778	8	NIC	ENSG00000124508.17	novel	2733	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	8.99886614172778	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAAACAAAAAGTG	6	True	NA	-11	True	AAAAAG	-16	NA	26383125	26393969	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_26383300_26383791_26383916_26385014_26385363_26388012_26388295_26390004_26390212_26390686_26390708_26390802_26390830_26392374
H1_mix_00073795	chr6	+	3137	8	FSM	ENSG00000112763.17	ENST00000429381.5	3113	8	-24	0	-13	0	multi-exon	FALSE	canonical	3	8	junction_7	14.6816559150582	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTGATTAACTTTTTCCA	6	False	NA	9	True	AATAAA	-18	NA	26457936	26469637	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26458143_26458606_26458719_26459480_26459829_26463243_26463526_26465184_26465407_26465952_26465974_26466061_26466089_26467718
H1_mix_00073796	chr6	+	3009	9	FSM	ENSG00000112763.17	ENST00000377600.7	3024	9	15	0	-13	0	multi-exon	FALSE	canonical	2	6	junction_3	15.8350876221131	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTGATTAACTTTTTCCA	6	False	NA	9	True	AATAAA	-18	NA	26457936	26469637	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26458143_26458606_26458719_26459480_26459829_26462796_26462898_26463243_26463526_26465184_26465407_26465952_26465974_26466061_26466089_26467947
H1_mix_00073798	chr6	+	2804	7	FSM	ENSG00000112763.17	ENST00000541522.5	2845	7	33	8	-13	8	multi-exon	FALSE	canonical	2	4	junction_1	16.8002976164114	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTTTTCCAGATCTAAT	6	False	NA	17	True	AATAAA	-26	NA	26457936	26469645	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26458143_26459480_26459829_26463243_26463526_26465184_26465407_26465952_26465974_26466061_26466089_26467947
H1_mix_00073804	chr6	+	1418	2	FSM	ENSG00000224843.8	ENST00000664092.1	1418	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTCTTTGTTGAACTGT	NA	False	NA	55	True	NA	NA	NA	27019958	27023974	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_27020656_27023253
H1_mix_00073807	chr6	+	460	1	FSM	ENSG00000274997.2	ENST00000377459.3	457	1	0	-3	0	3	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACTGTCTTAGAGAAAGC	0	True	NA	NA	False	AAAACA	-23	NA	27147105	27147565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_27147100_27147600
H1_mix_00073809	chr6	+	1781	5	FSM	ENSG00000112812.16	ENST00000488649.5	955	5	-32	-794	-32	0	multi-exon	TRUE	canonical	3	48	junction_1	32.6534837345114	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTTGTATGCACAGAG	122	False	NA	22	True	AATAAA	-19	NA	27251161	27256456	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_27251265_27252807_27252950_27254692_27254873_27254985_27255132_27255246
H1_mix_00073811	chr6	+	1763	4	FSM	ENSG00000112812.16	ENST00000492575.5	1002	4	-51	-710	-32	-2	multi-exon	FALSE	canonical	3	26	junction_2	49.3783578323765	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTATATGTTTTTGTGT	122	False	NA	3	True	TATAAA	-16	NA	27251161	27256618	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_27251265_27252807_27252950_27254985_27255132_27255246
H1_mix_00073812	chr6	+	918	5	FSM	ENSG00000112812.16	ENST00000481125.5	910	5	-8	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	45.5926255001837	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGTGGATGATTATTCT	-17	True	NA	16	True	NA	NA	NA	27251193	27255514	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_27251265_27251749_27252041_27252807_27252950_27254985_27255132_27255246
H1_mix_00073813	chr6	+	1019	5	FSM	ENSG00000112812.16	ENST00000484493.5	996	5	-23	0	-23	0	multi-exon	FALSE	canonical	3	11	junction_1	46.1268631060036	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATGTGACTTATGCTGG	65	False	NA	73	True	NA	NA	NA	27251275	27255571	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_27251502_27252807_27252950_27254692_27254873_27254985_27255132_27255246
H1_mix_00073819	chr6	+	2751	3	FSM	ENSG00000287252.2	ENST00000668543.1	2751	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATAAGAAGTCTCTTCCTT	2439	False	NA	3	True	ATTAAA	-13	NA	27759869	27763184	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_27761842_27762301_27762364_27762467
H1_mix_00073821	chr6	+	404	1	FSM	ENSG00000197238.5	ENST00000355057.3	389	1	-15	0	-15	0	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTCAGCTGAAGAGTGG	8820	False	NA	23	True	AATAAA	-24	NA	27824076	27824480	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_27824100_27824500
H1_mix_00073822	chr6	+	3502	1	FSM	ENSG00000233822.6	ENST00000612898.2	542	1	-3032	72	-3008	-72	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCCCGCCCACCGCGGA	NA	False	NA	NA	False	NA	NA	NA	27835536	27839038	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_27835500_27839000
H1_mix_00073824	chr6	+	537	1	FSM	ENSG00000274641.2	ENST00000616182.2	467	1	20	-90	20	90	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCTAAGCTCCCTAGGC	19	False	NA	NA	False	NA	NA	NA	27893444	27893981	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_27893400_27894000
H1_mix_00073831	chr6	+	1336	4	NNC	ENSG00000196812.6	novel	1279	4	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_3	31.4783876475414	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTACCTGAGTAAAATATC	-7	True	NA	18	True	ATTAAA	-18	NA	28124608	28130081	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_28124678_28125412_28125831_28126782_28126922_28129371
H1_mix_00073832	chr6	+	7442	6	FSM	ENSG00000198315.11	ENST00000330236.7	7419	6	-23	0	-23	0	multi-exon	FALSE	canonical	3	32	junction_1	5.63560112144215	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGGATTATTTGTGGT	-13	True	NA	24	True	AATAAA	-15	NA	28141859	28159460	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_28142030_28148315_28148825_28149482_28149625_28151844_28151937_28152260_28152385_28153055
H1_mix_00073833	chr6	+	7458	7	FSM	ENSG00000198315.11	ENST00000457389.6	2071	7	0	-5387	0	0	multi-exon	FALSE	canonical	3	3	junction_2	18.9010581714358	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGGATTATTTGTGGT	7	False	NA	24	True	AATAAA	-15	NA	28141937	28159460	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_28142030_28144330_28144425_28148315_28148825_28149482_28149625_28151844_28151937_28152260_28152385_28153055
H1_mix_00073835	chr6	+	1808	5	FSM	ENSG00000137185.13	ENST00000425468.6	1791	5	-17	0	-6	0	multi-exon	FALSE	canonical	1	1	junction_3	16.5604951616792	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACAGCCAACATGCCTGAA	4519	False	NA	8	True	AATAAA	-9	NA	28225257	28233466	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_28225367_28227011_28227505_28227689_28227838_28230335_28230489_28232561
H1_mix_00073837	chr6	+	1617	4	FSM	ENSG00000137185.13	ENST00000531979.5	1601	4	-16	0	1	0	multi-exon	FALSE	canonical	3	9	junction_1	14.1970262926979	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGATTTGGTATCTGTG	-8	True	NA	24	True	AATAAA	-25	NA	28225275	28233482	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_28225331_28227011_28227505_28227689_28227838_28232561
H1_mix_00073838	chr6	+	2062	3	FSM	ENSG00000137185.13	ENST00000527436.5	2062	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	12.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATTAAAATTGCTTCTG	55	False	NA	41	True	AGTAAA	-37	NA	28225338	28229230	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_28225367_28227011_28227505_28227689
H1_mix_00073839	chr6	+	2302	4	FSM	ENSG00000197062.12	ENST00000316606.10	2362	4	60	0	-25	0	multi-exon	FALSE	canonical	3	31	junction_2	11.7756811551038	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCCTGCAGATTTATTT	-27	True	NA	11	True	AATAAA	-11	NA	28267117	28278201	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_28267214_28271853_28271935_28272669_28272788_28276194
H1_mix_00073841	chr6	+	2517	4	FSM	ENSG00000197062.12	ENST00000614088.1	2321	4	-216	20	0	0	multi-exon	FALSE	canonical	3	17	junction_1	17.4610678049451	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCCTGCAGATTTATTT	-2	True	NA	11	True	AATAAA	-11	NA	28267142	28278201	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_28267454_28271853_28271935_28272669_28272788_28276194
H1_mix_00073843	chr6	+	4287	7	FSM	ENSG00000137338.6	ENST00000259883.3	3100	7	-13	-1174	-13	1174	multi-exon	FALSE	canonical	3	16	junction_1	15.9478316185409	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGTGGGTTGGTTTCACTT	-26	True	NA	36	True	AATACA	-6	NA	28281558	28303723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_28281919_28283755_28284210_28285550_28285708_28287079_28287169_28296815_28296946_28297894_28297992_28300723
H1_mix_00073849	chr6	+	1238	7	FSM	ENSG00000204642.14	ENST00000334668.8	1283	7	44	1	-8	-1	multi-exon	FALSE	canonical	2	10	junction_1	4.61880215351701	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGGTAGATATGTTTTTA	NA	False	NA	14	True	AATAAA	-26	NA	29723383	29726524	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_29723528_29723657_29723928_29724172_29724449_29725030_29725307_29725446_29725564_29726010_29726044_29726402
H1_mix_00073853	chr6	+	859	4	FSM	ENSG00000066379.15	ENST00000332435.10	851	4	-8	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	9.97775303139718	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATGTATGTTACTTATAA	2	True	NA	41	True	ATTAAA	-26	NA	30061256	30064907	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30061670_30061916_30062018_30062223_30062334_30064672
H1_mix_00073854	chr6	+	745	5	FSM	ENSG00000066379.15	ENST00000359374.8	743	5	-2	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	40.1995024844836	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATGTTACTTATAATC	2	True	NA	43	True	ATTAAA	-28	NA	30061256	30064909	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30061399_30061514_30061670_30061916_30062018_30062223_30062334_30064672
H1_mix_00073855	chr6	+	736	5	FSM	ENSG00000066379.15	ENST00000376782.6	736	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	82.1507760158113	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATGTTACTTATAATC	2	True	NA	43	True	ATTAAA	-28	NA	30061256	30064909	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30061390_30061514_30061670_30061916_30062018_30062223_30062334_30064672
H1_mix_00073856	chr6	+	760	5	FSM	ENSG00000066379.15	ENST00000376785.2	754	5	-6	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	76.985388224	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATGTTACTTATAATC	2	True	NA	43	True	ATTAAA	-28	NA	30061256	30064909	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30061414_30061514_30061670_30061916_30062018_30062223_30062334_30064672
H1_mix_00073858	chr6	+	1630	3	FSM	ENSG00000204619.8	ENST00000376772.8	1621	3	-9	0	-9	0	multi-exon	FALSE	canonical	3	421	junction_1	4.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTAAATATGGGCCCAT	34	False	NA	18	True	AATAAA	-19	NA	30067188	30070333	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30067480_30068589_30068699_30069103
H1_mix_00073860	chr6	+	3476	8	NIC	ENSG00000204599.15	novel	3624	8	NA	NA	5	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	40.3181227292165	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGATCTCTGTGTTGTGTG	42	False	NA	22	True	NA	NA	NA	30326483	30343724	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_30326888_30328908_30329042_30329310_30329771_30330780_30330877_30335744_30335976_30339907_30339931_30340504_30340621_30341711
H1_mix_00073861	chr6	+	3558	8	NNC	ENSG00000204599.15	novel	3198	9	NA	NA	56	-5	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_7	41.5259938263409	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGATCTCTGTGTTGTGT	10	True	NA	21	True	NA	NA	NA	30326534	30343723	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_30326996_30328908_30329042_30329310_30329771_30330780_30330877_30335744_30335976_30339907_30339931_30340504_30340621_30341685
H1_mix_00073862	chr6	+	3535	8	FSM	ENSG00000204599.15	ENST00000376659.9	3535	8	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_1	37.2284727550496	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGTTGTGTGGTAAT	24	False	NA	27	True	NA	NA	NA	30327258	30343729	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30327697_30328888_30329042_30329310_30329771_30330780_30330877_30335744_30335976_30339907_30339931_30340504_30340621_30341711
H1_mix_00073865	chr6	+	1688	4	FSM	ENSG00000241370.6	ENST00000473266.1	621	4	-1070	3	-1046	-3	multi-exon	FALSE	canonical	3	1071	junction_1	102.944429453738	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGATTCTGTTCTGTGGG	NA	False	NA	21	True	AATAAA	-19	NA	30344084	30346854	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30345229_30345297_30345574_30346431_30346558_30346712
H1_mix_00073866	chr6	+	1503	3	FSM	ENSG00000241370.6	ENST00000498414.5	1492	3	-11	0	0	0	multi-exon	FALSE	canonical	3	1071	junction_1	16.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTGTTCTGTGGGTAT	NA	False	NA	24	True	AATAAA	-22	NA	30345130	30346857	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30345229_30345297_30346558_30346712
H1_mix_00073867	chr6	+	548	5	FSM	ENSG00000241370.6	ENST00000442966.7	528	5	-23	3	-1	-3	multi-exon	FALSE	canonical	3	1071	junction_1	94.6387869744747	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGATTCTGTTCTGTGGG	NA	False	NA	21	True	AATAAA	-19	NA	30345132	30346854	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30345229_30345297_30345399_30345490_30345574_30346431_30346558_30346712
H1_mix_00073868	chr6	+	561	5	FSM	ENSG00000241370.6	ENST00000436442.2	522	5	-36	-3	-1	3	multi-exon	FALSE	canonical	3	67	junction_4	498.95609776813	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTTCTGTGGGTATTTC	NA	False	NA	27	True	AATAAA	-25	NA	30345132	30346860	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30345229_30345297_30345399_30345490_30345574_30346431_30346565_30346712
H1_mix_00073874	chr6	+	2007	5	FSM	ENSG00000204576.12	ENST00000498336.5	2005	5	-2	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	6.22494979899437	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTTCTAGTCATCT	9	True	NA	79	True	AATAAA	-28	NA	30557313	30563723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30557451_30558149_30558213_30561327_30561509_30561833_30562125_30562388
H1_mix_00073875	chr6	+	1958	4	FSM	ENSG00000204576.12	ENST00000481741.5	1944	4	-14	0	5	0	multi-exon	FALSE	canonical	3	28	junction_2	5.8878405775519	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTTCTAGTCATCT	-5	True	NA	79	True	AATAAA	-28	NA	30557299	30563723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30557451_30561327_30561509_30561833_30562125_30562388
H1_mix_00073877	chr6	+	3422	25	FSM	ENSG00000204574.14	ENST00000441867.6	3426	25	4	0	4	0	multi-exon	FALSE	canonical	3	306	junction_3	89.5865115715282	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGGAACATGGGTCTC	-25	True	NA	2	True	AAAAAG	-20	NA	30571427	30591522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30571561_30577408_30577456_30577817_30577914_30578072_30578203_30578347_30578386_30578469_30578578_30579930_30580006_30580405_30580520_30582393_30582508_30583065_30583189_30583607_30583709_30583804_30583891_30584191_30584332_30584417_30584567_30585259_30585344_30585557_30585683_30585878_30585992_30586133_30586306_30586473_30586549_30586640_30586712_30589687_30589721_30589805_30589975_30590148_30590214_30590305_30590379_30590534
H1_mix_00073879	chr6	+	2612	9	FSM	ENSG00000137343.18	ENST00000318999.11	2611	9	-1	0	-1	0	multi-exon	FALSE	canonical	3	36	junction_7	62.2985503442897	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCAGCCTCATTTGTGC	8994	False	NA	53	True	AAAAAG	-17	NA	30626840	30644679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30642175_30642248_30642767
H1_mix_00073881	chr6	+	2073	10	FSM	ENSG00000137343.18	ENST00000319027.9	2061	10	-12	0	7	0	multi-exon	FALSE	canonical	3	16	junction_9	78.1685421870865	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCAGCCTCATTTGTGC	-4	True	NA	53	True	AAAAAG	-17	NA	30626862	30644679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30642175_30642248_30642767_30643012_30643528
H1_mix_00073883	chr6	+	1604	11	FSM	ENSG00000137343.18	ENST00000471782.5	1527	11	-79	2	-1	0	multi-exon	FALSE	canonical	3	52	junction_9	53.0253712858288	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTGTTGAAAAATTTGAC	8994	False	NA	12	True	AATAAA	-21	NA	30626840	30646821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30642175_30642248_30645894_30645975_30646066
H1_mix_00073885	chr6	+	1402	6	FSM	ENSG00000204564.12	ENST00000376473.9	1402	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	19.2208220427743	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGTCAGGTTCTGTTT	36	False	NA	15	True	ATTAAA	-22	NA	30647072	30653210	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30647304_30649557_30649960_30650993_30651083_30651265_30651467_30652647_30652718_30652801
H1_mix_00073887	chr6	+	2515	4	FSM	ENSG00000196230.14	ENST00000327892.13	2515	4	0	0	0	0	multi-exon	FALSE	canonical	3	12703	junction_2	590.579940961989	2860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCGAGATGTGTGCTTAT	-2	True	NA	32	True	AATAAA	-16	NA	30720351	30725422	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30720564_30722536_30722646_30722917_30723029_30723339
H1_mix_00073888	chr6	+	2632	4	FSM	ENSG00000196230.14	ENST00000330914.7	2632	4	0	0	0	0	multi-exon	FALSE	canonical	3	980	junction_1	5560.76711334766	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGATGTGTGCTTATTTAG	-8	True	NA	36	True	AATAAA	-20	NA	30721573	30725426	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30721899_30722536_30722646_30722917_30723029_30723339
H1_mix_00073891	chr6	+	3685	17	NIC	ENSG00000204580.14	novel	4148	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_1	159.230461419133	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACTGTGTGAGTGGGTTC	-8	True	NA	21	True	AATAAA	-14	NA	30880969	30900152	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_30881126_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
H1_mix_00073892	chr6	+	4521	18	NIC	ENSG00000204580.14	novel	4148	20	NA	NA	0	817	combination_of_known_junctions	FALSE	canonical	3	67	junction_1	168.801330780762	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAATGAGCATAAGCCATA	4	True	NA	17	True	AATAAA	-17	NA	30881065	30900973	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_30881126_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30895403_30895515_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
H1_mix_00073896	chr6	+	3607	17	FSM	ENSG00000204580.14	ENST00000418800.6	3588	17	-19	0	-19	0	multi-exon	FALSE	canonical	3	147	junction_1	143.827030991222	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGGGGGTAGCCCCGCC	1510	False	NA	NA	False	NA	NA	NA	30882593	30899840	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30882984_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
H1_mix_00073897	chr6	+	696	5	FSM	ENSG00000204580.14	ENST00000396342.6	675	5	-21	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	233.769517901714	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGTGGTGCTGAAGGACC	13	True	NA	NA	False	NA	NA	NA	30882954	30890998	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30883166_30888687_30888815_30888907_30889011_30889201_30889431_30890972
H1_mix_00073900	chr6	+	3837	19	FSM	ENSG00000204580.14	ENST00000376570.8	3820	19	-15	-2	0	0	multi-exon	FALSE	canonical	3	29	junction_1	219.125534796837	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTGAGTGGGTTCCT	-26	True	NA	23	True	AATAAA	-16	NA	30884068	30900154	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30884146_30884537_30884711_30885624_30885681_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
H1_mix_00073901	chr6	+	3783	18	FSM	ENSG00000204580.14	ENST00000376569.7	3783	18	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	188.779030857109	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGGTTCCTTG	-26	True	NA	25	True	AATAAA	-18	NA	30884068	30900156	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30884146_30884537_30884711_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
H1_mix_00073903	chr6	+	3836	18	FSM	ENSG00000204580.14	ENST00000376568.8	3836	18	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	154.366234183695	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGGTTCCTTG	-25	True	NA	25	True	AATAAA	-18	NA	30884518	30900156	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30884711_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30895403_30895515_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
H1_mix_00073905	chr6	+	3797	16	FSM	ENSG00000204580.14	ENST00000376567.6	3832	16	35	0	35	0	multi-exon	FALSE	canonical	3	320	junction_10	94.6512663529771	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGGTTCCTTG	161	False	NA	25	True	AATAAA	-18	NA	30888423	30900156	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
H1_mix_00073911	chr6	+	4073	29	FSM	ENSG00000137411.19	ENST00000321897.9	4073	29	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_7	22.217041629693	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTGTTTATGGCTCTT	5998	False	NA	17	True	GATAAA	-17	NA	30914204	30926459	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30915038_30915155_30915238_30915354_30915456_30915745_30915868_30915980_30916048_30916151_30916250_30916877_30916960_30917104_30917225_30917694_30917807_30918826_30918916_30919757_30919849_30920088_30920217_30920332_30920437_30920667_30920750_30921064_30921142_30921229_30921306_30921588_30921692_30921924_30921996_30922115_30922242_30922449_30922555_30922705_30922775_30922897_30922977_30923103_30923232_30923352_30923506_30924353_30924561_30925273_30925386_30925543_30925720_30925879_30926009_30926108
H1_mix_00073913	chr6	+	3593	30	FSM	ENSG00000137411.19	ENST00000676266.1	3575	30	-18	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	26.2830563053745	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTGTTTATGGCTCTT	-38	True	NA	17	True	GATAAA	-17	NA	30914219	30926459	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30914345_30914809_30915038_30915155_30915238_30915354_30915456_30915745_30915868_30915980_30916048_30916151_30916250_30916877_30916960_30917104_30917225_30917694_30917807_30918826_30918916_30919757_30919849_30920088_30920217_30920332_30920437_30920667_30920750_30921064_30921142_30921229_30921306_30921588_30921692_30921924_30921996_30922115_30922242_30922449_30922555_30922705_30922775_30922897_30922977_30923103_30923232_30923352_30923506_30924353_30924561_30925273_30925386_30925543_30925720_30925879_30926009_30926108
H1_mix_00073920	chr6	+	357	1	FSM	ENSG00000271581.1	ENST00000603274.1	991	1	-54	688	-54	-688	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGAGCCTGGGGGTGAGG	426	False	NA	NA	False	NA	NA	NA	31356592	31356949	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31356600_31356900
H1_mix_00073925	chr6	+	1297	4	NIC	ENSG00000204498.11	novel	1411	4	NA	NA	63	-6	combination_of_known_junctions	FALSE	canonical	2	16	junction_3	26.4112770527204	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCACTCCCAGTGTCTCC	78	False	NA	25	True	NA	NA	NA	31546932	31558823	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_31546974_31548162_31548440_31557627_31557805_31558021
H1_mix_00073926	chr6	+	1562	4	FSM	ENSG00000204498.11	ENST00000376148.9	1451	4	-111	0	-111	0	multi-exon	FALSE	canonical	3	34	junction_1	17.9691092959247	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCAGTGTCTCCTCTGTC	548	False	NA	31	True	NA	NA	NA	31547496	31558829	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31547752_31548162_31548440_31557627_31557850_31558021
H1_mix_00073927	chr6	+	1424	4	FSM	ENSG00000204498.11	ENST00000376145.8	1401	4	-23	0	-18	0	multi-exon	FALSE	canonical	2	16	junction_3	26.0426999794995	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCAGTGTCTCCTCTGTC	-12	True	NA	31	True	NA	NA	NA	31547589	31558829	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31547752_31548162_31548440_31557627_31557805_31558021
H1_mix_00073930	chr6	+	546	3	FSM	ENSG00000204472.13	ENST00000376049.4	524	3	-22	0	-22	0	multi-exon	FALSE	canonical	3	86	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGCTTAGTTTTTATTTG	104	False	NA	14	True	AATAAA	-22	NA	31615968	31617021	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31616146_31616343_31616507_31616815
H1_mix_00073932	chr6	+	6901	31	FSM	ENSG00000204469.13	ENST00000376007.8	6861	31	-40	0	-35	0	multi-exon	FALSE	canonical	3	196	junction_1	159.458946301409	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTACAATGATTTGGGGG	-8	True	NA	30	True	AATAAA	-19	NA	31620679	31637771	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31620859_31622726_31622902_31623731_31623910_31624260_31624361_31624449_31624523_31625170_31625315_31625459_31625612_31625791_31625872_31626019_31626163_31626771_31626863_31626981_31627199_31627764_31628240_31629143_31629335_31629547_31629846_31630590_31630802_31631138_31632993_31633378_31633648_31633858_31633990_31634235_31634366_31634471_31634558_31634752_31634978_31635131_31635273_31635393_31635466_31635581_31635750_31635966_31636050_31636208_31636420_31636509_31636609_31636732_31636946_31637041_31637137_31637233_31637325_31637445
H1_mix_00073935	chr6	+	1118	5	FSM	ENSG00000204469.13	ENST00000492691.5	1118	5	0	0	0	0	multi-exon	FALSE	canonical	3	582	junction_2	34.1577224065071	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTACAATGATTTGGGGG	2256	False	NA	30	True	AATAAA	-19	NA	31636246	31637771	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31636420_31636509_31636609_31636732_31636946_31637041_31637137_31637233
H1_mix_00073941	chr6	+	936	7	FSM	ENSG00000204435.15	ENST00000375882.7	929	7	-7	0	-7	0	multi-exon	FALSE	canonical	3	1016	junction_6	58.7038234605625	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTAGTCTGCTGGTGCT	-18	True	NA	14	True	AATAAA	-17	NA	31666072	31670067	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31666209_31666820_31666904_31667867_31667971_31668538_31668655_31669096_31669173_31669318_31669509_31669835
H1_mix_00073943	chr6	+	905	7	FSM	ENSG00000204435.15	ENST00000375865.6	908	7	3	0	3	0	multi-exon	FALSE	canonical	3	8	junction_1	417.786395448945	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTAGTCTGCTGGTGCTTGC	161	False	NA	17	True	AATAAA	-20	NA	31666294	31670070	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31666397_31666820_31666904_31667867_31667971_31668538_31668655_31669096_31669173_31669318_31669509_31669835
H1_mix_00073957	chr6	+	860	5	FSM	ENSG00000204387.14	ENST00000375638.7	847	5	-13	0	-13	0	multi-exon	FALSE	canonical	3	91	junction_2	236.845941489399	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACGTGGTTTGGTCTCA	280	False	NA	16	True	AATAAA	-16	NA	31834894	31839761	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31835201_31835410_31835452_31836423_31836518_31837235_31837436_31839542
H1_mix_00073958	chr6	+	623	4	FSM	ENSG00000204387.14	ENST00000375635.6	610	4	-13	0	-13	0	multi-exon	FALSE	canonical	3	37	junction_1	260.750625864808	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACGTGGTTTGGTCTCA	280	False	NA	16	True	AATAAA	-16	NA	31834894	31839761	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31835058_31835410_31835452_31837235_31837436_31839542
H1_mix_00073959	chr6	+	985	5	FSM	ENSG00000204387.14	ENST00000375642.6	962	5	-23	0	-13	0	multi-exon	FALSE	canonical	1	5	junction_2	258.400367646797	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACGTGGTTTGGTCTCA	280	False	NA	16	True	AATAAA	-16	NA	31834894	31839761	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31835201_31835410_31835452_31836298_31836518_31837235_31837436_31839542
H1_mix_00073961	chr6	+	815	2	FSM	ENSG00000204387.14	ENST00000395788.3	815	2	0	0	0	0	multi-exon	FALSE	canonical	3	675	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGTGGTTTGGTCTCAGAA	110	False	NA	19	True	AATAAA	-19	NA	31836842	31839764	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31837436_31839542
H1_mix_00073964	chr6	+	1307	6	FSM	ENSG00000204351.12	ENST00000483553.5	1307	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	77.9163654183125	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGTTGTGTGCTTGAGT	8470	False	NA	21	True	GATAAA	-9	NA	31967758	31969751	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31967863_31967955_31968083_31968327_31968539_31968622_31968797_31968870_31969090_31969279
H1_mix_00073968	chr6	+	2555	6	FSM	ENSG00000204344.16	ENST00000473983.5	1894	6	-441	-220	0	0	multi-exon	FALSE	canonical	3	60	junction_1	17.4241212116996	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACCTCTGCCTGTGATAT	101	False	NA	NA	False	NA	NA	NA	31971898	31981429	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31972512_31972620_31972758_31978902_31978999_31979413_31980549_31980653_31980802_31981003
H1_mix_00073969	chr6	+	1046	6	FSM	ENSG00000204344.16	ENST00000483801.6	1039	6	-7	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	35.9888871736818	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACCTCTGCCTGTGATAT	16	True	NA	NA	False	NA	NA	NA	31972373	31981429	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31972512_31978902_31978999_31979413_31979554_31980450_31980549_31980653_31980802_31981003
H1_mix_00073970	chr6	+	1233	7	FSM	ENSG00000204344.16	ENST00000685781.1	1211	7	-22	0	1	0	multi-exon	FALSE	canonical	3	59	junction_4	17.8947540419594	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGGATGTCCTTTA	-17	True	NA	NA	False	AATAAA	-17	NA	31972340	31981446	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31972512_31972620_31972758_31978902_31978999_31979413_31979554_31980450_31980549_31980653_31980802_31981003
H1_mix_00073971	chr6	+	1141	6	FSM	ENSG00000204344.16	ENST00000491861.5	1128	6	-13	0	7	0	multi-exon	FALSE	canonical	3	59	junction_3	17.6680502602862	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGGATGTCCTTTA	-35	True	NA	NA	False	AATAAA	-17	NA	31972541	31981446	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31972758_31978902_31978999_31979413_31979554_31980450_31980549_31980653_31980802_31981003
H1_mix_00073974	chr6	+	1945	9	FSM	ENSG00000221988.13	ENST00000375137.6	1945	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	62.4168196482326	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGGCTCATTTCCAGG	47	False	NA	18	True	AATAAA	-18	NA	32154094	32163678	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_32154395_32154586_32154778_32155029_32155184_32155687_32155784_32155870_32155979_32157636_32157721_32157839_32157925_32162567_32162623_32162806
H1_mix_00073975	chr6	+	1909	9	FSM	ENSG00000221988.13	ENST00000324816.11	1906	9	-3	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	45.4049487941568	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGACTTGGCTCATTTCC	-39	True	NA	15	True	AATAAA	-15	NA	32154137	32163675	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_32154405_32154586_32154778_32155029_32155184_32155687_32155784_32155870_32155979_32157636_32157721_32157839_32157925_32162567_32162623_32162806
H1_mix_00073978	chr6	+	2729	6	FSM	ENSG00000241404.7	ENST00000466239.5	2441	6	29	-317	29	317	multi-exon	FALSE	canonical	3	50	junction_2	10.807404868885	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGGGGACAGAAAACCAGA	664	False	NA	NA	False	GGGGCT	-32	NA	32165264	32168598	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_32166621_32166700_32166811_32166909_32167006_32167086_32167258_32167349_32167657_32167909
H1_mix_00073981	chr6	+	495	1	FSM	ENSG00000237285.1	ENST00000432375.1	960	1	701	-236	701	236	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAAGGGTTTTAATGTAG	NA	False	NA	NA	False	NA	NA	NA	32325919	32326414	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_32325900_32326400
H1_mix_00073984	chr6	+	2217	1	FSM	ENSG00000204261.9	ENST00000666376.1	2182	1	160	-195	145	2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTTTTCCTTATGTTTC	158	False	NA	6	True	AATAAA	-15	NA	32844278	32846495	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_32844300_32846500
H1_mix_00073991	chr6	+	6084	11	FSM	ENSG00000204256.14	ENST00000469132.2	6084	11	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	153.387124622636	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAATAAAGAAAATATTAT	13	True	NA	12	True	NA	NA	NA	32968898	32981286	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_32969057_32971594_32972928_32974461_32974766_32975383_32975522_32976030_32976170_32976249_32976465_32976561_32976937_32977441_32977571_32977756_32978006_32978125_32980465_32980581
H1_mix_00073992	chr6	+	6496	14	FSM	ENSG00000223837.2_ENSG00000204256.14	ENST00000482914.5	4834	14	-1667	5	8	-1	multi-exon	FALSE	canonical	3	54	junction_1	207.004101951754	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAGTCCTTAGAAGTAAT	29	False	NA	15	True	AATAAA	-20	NA	32969285	32981500	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_32971198_32971594_32972928_32974461_32974766_32975020_32975113_32975383_32975522_32976030_32976170_32976249_32976465_32976561_32976937_32977441_32977571_32977756_32978006_32978125_32978389_32979827_32980133_32980341_32980465_32980581
H1_mix_00073993	chr6	+	4579	13	FSM	ENSG00000204256.14	ENST00000449085.4	4579	13	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	165.836494944736	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTCCTTAGAAGTAATC	10	False	NA	16	True	AATAAA	-21	NA	32969266	32981501	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_32969353_32971594_32972928_32974461_32974766_32975383_32975522_32976030_32976170_32976249_32976465_32976561_32976937_32977441_32977571_32977756_32978006_32978125_32978389_32979827_32980133_32980341_32980465_32980581
H1_mix_00073995	chr6	+	6190	13	FSM	ENSG00000223837.2_ENSG00000204256.14	ENST00000374831.8	4807	13	-1602	219	8	0	multi-exon	FALSE	canonical	3	54	junction_1	157.997077152993	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAATAAAGAAAATATTAT	29	False	NA	12	True	NA	NA	NA	32969285	32981286	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_32971198_32971594_32972928_32974461_32974766_32975383_32975522_32976030_32976170_32976249_32976465_32976561_32976937_32977441_32977571_32977756_32978006_32978125_32978389_32979827_32980133_32980341_32980465_32980581
H1_mix_00073996	chr6	+	4520	13	FSM	ENSG00000204256.14	ENST00000464592.6	4520	13	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	215.057792620185	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCACCCCCCCCCGCCCC	145	False	NA	NA	False	NA	NA	NA	32971081	32980815	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_32971198_32971594_32972928_32974461_32974766_32975020_32975113_32975383_32975522_32976030_32976170_32976249_32976465_32976561_32977571_32977756_32978006_32978125_32978389_32979827_32980133_32980341_32980465_32980581
H1_mix_00073998	chr6	+	3085	3	FSM	ENSG00000204256.14	ENST00000482838.1	759	3	-1591	-735	1522	0	multi-exon	FALSE	canonical	3	635	junction_2	57	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTCCTTAGAAGTAATC	277	False	NA	16	True	AATAAA	-21	NA	32978090	32981501	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_32980133_32980341_32980465_32980581
H1_mix_00074000	chr6	+	894	3	FSM	ENSG00000223865.11	ENST00000471184.5	912	3	0	18	0	-18	multi-exon	FALSE	canonical	0	0	junction_2	32.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGAGCTCAGGATATTCT	20	False	NA	NA	False	AAAAAG	-26	NA	33080385	33083994	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33080535_33080671_33080936_33083513
H1_mix_00074002	chr6	+	775	2	FSM	ENSG00000223865.11	ENST00000498038.1	775	2	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCTCTGATGACCCTC	24	False	NA	NA	False	NA	NA	NA	33080442	33085231	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33080936_33084949
H1_mix_00074007	chr6	+	1179	3	NIC	ENSG00000224557.8	novel	1085	3	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_1	55	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCATGCTTACTTCTTGT	13	False	NA	21	True	AATAAA	-31	NA	33116690	33119163	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_33116833_33116956_33117221_33118390
H1_mix_00074008	chr6	+	966	2	NNC	ENSG00000224557.8	novel	1213	3	NA	NA	620	0	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGATAGTAAAATTTTCATG	-5	True	NA	9	True	AATAAA	-19	NA	33117382	33119151	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_33117588_33118390
H1_mix_00074009	chr6	+	2413	7	FSM	ENSG00000112473.18	ENST00000374677.8	2413	7	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_3	9.03081145609604	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCAGTCTTTGTCTTTTT	-27	True	NA	22	True	AATAAA	-22	NA	33200866	33204437	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33201657_33201744_33201914_33202071_33202126_33202262_33202428_33202559_33202701_33202909_33203107_33203540
H1_mix_00074013	chr6	+	666	5	FSM	ENSG00000231500.7	ENST00000496813.5	642	5	-24	0	0	0	multi-exon	FALSE	canonical	3	20916	junction_1	2520.66236334817	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGCTTCCTGTCCTTTCT	-1	True	NA	6	True	AATAAA	-14	NA	33272074	33276505	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33272123_33272627_33272727_33275796_33275884_33275964_33276067_33276175
H1_mix_00074014	chr6	+	704	5	FSM	ENSG00000231500.7	ENST00000474626.5	639	5	-60	-5	-47	0	multi-exon	TRUE	canonical	3	20916	junction_1	2901.36858870086	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTCCTTTCTGTCCA	NA	False	NA	11	True	AATAAA	-19	NA	33272027	33276510	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33272123_33272627_33272727_33275796_33275884_33275964_33276268_33276390
H1_mix_00074015	chr6	+	589	6	FSM	ENSG00000231500.7	ENST00000474973.5	589	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	10175.6813118336	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTCCTTTCTGTCCA	-1	True	NA	11	True	AATAAA	-19	NA	33272074	33276510	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33272123_33272586_33272727_33275796_33275884_33275964_33276067_33276175_33276268_33276390
H1_mix_00074016	chr6	+	706	7	FSM	ENSG00000231500.7	ENST00000476222.5	685	7	-21	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	11422.1853231138	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTCCTTTCTGTCCA	-1	True	NA	11	True	AATAAA	-19	NA	33272074	33276510	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33272123_33272627_33272727_33275499_33275658_33275796_33275884_33275964_33276067_33276175_33276268_33276390
H1_mix_00074017	chr6	+	549	6	FSM	ENSG00000231500.7	ENST00000439602.7	549	6	0	0	0	0	multi-exon	FALSE	canonical	3	20916	junction_1	2623.01341208923	3328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTCCTTTCTGTCCAT	-1	True	NA	12	True	AATAAA	-20	NA	33272074	33276511	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33272123_33272627_33272727_33275796_33275884_33275964_33276067_33276175_33276268_33276390
H1_mix_00074018	chr6	+	996	5	FSM	ENSG00000231500.7	ENST00000490191.5	996	5	0	0	0	0	multi-exon	FALSE	canonical	3	21469	junction_4	2309.00058196181	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTCCTTTCTGTCCA	56	False	NA	11	True	AATAAA	-19	NA	33272131	33276510	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33272727_33275796_33275884_33275964_33276067_33276175_33276268_33276390
H1_mix_00074019	chr6	+	1109	2	FSM	ENSG00000231500.7	ENST00000472218.1	1109	2	0	0	0	0	multi-exon	FALSE	canonical	3	27930	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTCCTTTCTGTCCA	3245	False	NA	11	True	AATAAA	-19	NA	33275320	33276510	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33275884_33275964
H1_mix_00074020	chr6	+	413	3	FSM	ENSG00000231500.7	ENST00000479802.1	413	3	0	0	0	0	multi-exon	FALSE	canonical	3	21469	junction_2	1722.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTCCTTTCTGTCCA	3790	False	NA	11	True	AATAAA	-19	NA	33275865	33276510	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33276067_33276175_33276268_33276390
H1_mix_00074022	chr6	+	815	4	FSM	ENSG00000204220.12	ENST00000395134.3	805	4	-10	0	-10	0	multi-exon	FALSE	canonical	3	36	junction_1	105.422957651548	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAATGAGGCAGCTCTAG	-24	True	NA	-34	True	NA	NA	NA	33289585	33290875	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33289629_33289769_33289921_33290173_33290245_33290325
H1_mix_00074023	chr6	+	749	4	FSM	ENSG00000204220.12	ENST00000374606.10	734	4	-15	0	-10	0	multi-exon	FALSE	canonical	3	211	junction_3	23.1564725772779	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTTCCTGACCAGGCA	-24	True	NA	24	True	AATAAA	-17	NA	33289585	33290933	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33289921_33290173_33290245_33290325_33290451_33290715
H1_mix_00074024	chr6	+	728	5	FSM	ENSG00000204220.12	ENST00000395131.5	884	5	156	0	-138	0	multi-exon	FALSE	canonical	3	43	junction_1	89.0347544501584	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTTCCTGACCAGGCA	NA	False	NA	24	True	AATAAA	-17	NA	33289457	33290933	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33289621_33289769_33289921_33290173_33290245_33290325_33290451_33290715
H1_mix_00074025	chr6	+	736	5	FSM	ENSG00000204220.12	ENST00000374607.5	598	5	-139	1	-138	0	multi-exon	FALSE	canonical	3	36	junction_1	91.9904886387718	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTTCCTGACCAGGCA	NA	False	NA	24	True	AATAAA	-17	NA	33289457	33290933	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33289629_33289769_33289921_33290173_33290245_33290325_33290451_33290715
H1_mix_00074026	chr6	+	989	2	FSM	ENSG00000204220.12	ENST00000491382.1	989	2	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGGGAGGGAATGAGGCA	17	True	NA	-41	True	GGGGCT	-39	NA	33289626	33290868	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33289921_33290173
H1_mix_00074027	chr6	+	518	1	FSM	ENSG00000229596.3	ENST00000431574.1	518	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAACTTTAGCTAAAACC	33	False	NA	NA	False	NA	NA	NA	33338977	33339495	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33339000_33339500
H1_mix_00074030	chr6	+	439	4	FSM	ENSG00000237649.8	ENST00000486695.1	667	4	228	0	228	0	multi-exon	FALSE	canonical	2	10	junction_1	195.270752204898	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGCTTCAGGACCAGCTC	8471	False	NA	NA	False	ACTAAA	-42	NA	33400318	33403866	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33400515_33403313_33403368_33403484_33403536_33403728
H1_mix_00074032	chr6	+	2263	15	FSM	ENSG00000112511.18	ENST00000374516.8	2263	15	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_11	24.4948974278318	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGCAGCTCTGAGTCATT	-19	True	NA	8	True	AATAAA	-15	NA	33411013	33416439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33411216_33412247_33412423_33412507_33412590_33412697_33412794_33413195_33413297_33413408_33413558_33413735_33413832_33414040_33414110_33414242_33414367_33414476_33414545_33414724_33414830_33414954_33415145_33415234_33415330_33415589_33415671_33415809
H1_mix_00074038	chr6	+	2715	2	FSM	ENSG00000213588.6	ENST00000395064.3	2715	2	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACAGTGGACTGGATTGA	-16	True	NA	27	True	AATAAA	-20	NA	33454575	33457544	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33454776_33455029
H1_mix_00074040	chr6	+	886	2	NNC	ENSG00000096433.11	novel	9079	58	NA	NA	11	-64597	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGATTGCTAATTGTCCA	-1	True	NA	3	True	ATTAAA	-14	NA	33621332	33631965	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_33621692_33631438
H1_mix_00074042	chr6	+	2160	5	FSM	ENSG00000137309.20	ENST00000447654.5	2159	5	0	-1	0	0	multi-exon	FALSE	canonical	3	17101	junction_2	1714.53856766187	2614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGTCTCCTGTGGTGTG	-4	True	NA	69	True	AATAAA	-20	NA	34236872	34246231	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_34237318_34240736_34240916_34242711_34242796_34243467_34243519_34244830
H1_mix_00074045	chr6	+	1798	5	FSM	ENSG00000137309.20	ENST00000347617.10	1773	5	0	-25	0	25	multi-exon	FALSE	canonical	3	1374	junction_1	8325.67495762356	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAAGCCTGGGGCAGGTAG	-4	True	NA	94	True	AATAAA	-45	NA	34236872	34246256	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_34236964_34240736_34240883_34242711_34242796_34243467_34243519_34244830
H1_mix_00074058	chr6	+	2753	14	NIC	ENSG00000065029.15	novel	1373	10	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	50.9865976124577	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGGTCCCTCCATCCT	-11	True	NA	5	True	AATAAA	-14	NA	35259518	35295983	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_35259728_35281055_35281225_35286127_35286209_35286321_35286400_35287645_35287846_35290265_35290383_35290640_35290717_35291277_35291404_35291557_35291738_35292553_35292788_35292880_35293045_35293750_35293916_35294455_35294570_35295143
H1_mix_00074059	chr6	+	2653	14	FSM	ENSG00000065029.15	ENST00000373953.8	2653	14	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_12	28.5483084815854	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGTCCCTCCATCCTTT	-2	True	NA	7	True	AATAAA	-16	NA	35259734	35295985	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_35259842_35281055_35281225_35286127_35286209_35286321_35286400_35287645_35287846_35290265_35290383_35290640_35290717_35291277_35291404_35291557_35291738_35292553_35292788_35292880_35293045_35293750_35293916_35294455_35294570_35295143
H1_mix_00074060	chr6	+	2669	14	NNC	ENSG00000065029.15	novel	2653	14	NA	NA	-4	-8	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	63.5240251806191	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATTTCCACCTGGGTCCC	33	False	NA	-3	True	AATAAA	-6	NA	35259769	35295975	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_35259842_35281055_35281225_35286127_35286209_35286321_35286400_35287645_35287846_35290265_35290383_35290640_35290717_35291277_35291404_35291557_35291738_35292553_35292788_35292880_35293045_35294455_35294570_35294689_35294916_35295143
H1_mix_00074061	chr6	+	2447	13	FSM	ENSG00000065029.15	ENST00000339411.5	2447	13	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_11	33.3137442440137	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGGTCCCTCCATCCT	37	False	NA	5	True	AATAAA	-14	NA	35259773	35295983	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_35259842_35281055_35281225_35286127_35286209_35286321_35286400_35287645_35287846_35290265_35290383_35290640_35290717_35291277_35291404_35291557_35291738_35292553_35292788_35292880_35293045_35294455_35294570_35295143
H1_mix_00074063	chr6	+	2167	11	NIC	ENSG00000023892.11	novel	2296	11	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	13.2453765518388	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTGGCTCAGGTCTGTCC	-1	True	NA	NA	False	AATAAA	-19	NA	35297835	35321771	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_35297953_35309669_35309811_35310569_35310645_35312301_35312539_35312625_35312773_35317890_35318000_35318172_35318472_35319523_35319691_35319818_35320018_35320883_35320975_35321186
H1_mix_00074068	chr6	+	2519	9	NIC	ENSG00000112039.5	novel	2576	10	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_3	36.5196864718196	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTTTTCTTTTTTTTTT	-22	True	NA	NA	False	AATAAA	-15	NA	35452325	35467102	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_35452794_35455746_35456354_35457555_35457601_35458296_35458441_35459330_35459455_35459681_35459761_35460551_35460619_35462788_35462915_35466243
H1_mix_00074069	chr6	+	718	6	FSM	ENSG00000198755.11	ENST00000322203.7	718	6	0	0	0	0	multi-exon	FALSE	canonical	3	9217	junction_1	1751.87122814435	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTGTCTGCCTGTGATT	-3	True	NA	21	True	AATAAA	-15	NA	35468400	35470780	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_35468440_35468798_35468874_35468946_35469028_35469380_35469530_35470178_35470352_35470579
H1_mix_00074070	chr6	+	1076	5	FSM	ENSG00000198755.11	ENST00000467020.5	1069	5	-7	0	0	0	multi-exon	FALSE	canonical	3	9217	junction_1	1815.92281980815	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCCTGTGATTGAGGG	-3	True	NA	26	True	AATAAA	-20	NA	35468400	35470785	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_35468440_35468798_35468874_35468946_35469530_35470178_35470352_35470579
H1_mix_00074071	chr6	+	1464	5	FSM	ENSG00000198755.11	ENST00000464112.5	1063	5	-406	5	-387	0	multi-exon	FALSE	canonical	3	13064	junction_3	328.868894850212	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTGTCTGCCTGTGATT	NA	False	NA	21	True	AATAAA	-15	NA	35468013	35470780	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_35468874_35468946_35469028_35469380_35469530_35470178_35470352_35470579
H1_mix_00074085	chr6	+	3329	6	FSM	ENSG00000096070.19	ENST00000441730.2	3329	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	40.3217063131014	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGTTGCTGTGTTGTGTTT	992	False	NA	15	True	AATAAA	-15	NA	36211447	36232787	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_36211561_36213879_36214387_36217916_36218011_36225266_36225365_36228901_36229057_36230425
H1_mix_00074095	chr6	+	6782	9	FSM	ENSG00000198663.17	ENST00000480824.7	6763	9	-19	0	-19	0	multi-exon	FALSE	canonical	1	4	junction_1	14.683643110618	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTCTTGTTGGTGTCA	6	False	NA	22	True	ATTAAA	-19	NA	36885932	36928964	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_36886029_36894503_36894604_36899425_36899634_36902220_36902435_36914283_36914436_36914553_36914694_36916444_36916575_36919577_36919702_36923346
H1_mix_00074101	chr6	+	5787	8	FSM	ENSG00000112130.17	ENST00000229866.10	2124	8	-96	-3567	-60	1	multi-exon	FALSE	canonical	3	36	junction_2	114.291428428579	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCAAATGCCCATTTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	37353918	37394735	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_37354276_37360445_37360575_37368377_37369219_37371511_37371575_37374619_37374710_37376925_37377034_37381149_37381355_37390741
H1_mix_00074103	chr6	+	1298	10	FSM	ENSG00000137200.13	ENST00000455891.5	1280	10	-18	0	-17	0	multi-exon	FALSE	canonical	2	4	junction_6	62.4250661905047	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTCAAGCCTATTACCAG	-15	True	NA	NA	False	GGGGCT	-38	NA	37433201	37462061	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_37433378_37435623_37435763_37443998_37444151_37446290_37446450_37450250_37450344_37451805_37451878_37458611_37458811_37459565_37459685_37461548_37461646_37461969
H1_mix_00074105	chr6	+	2866	24	NIC	ENSG00000137200.13	novel	4034	24	NA	NA	14	6	combination_of_known_junctions	TRUE	canonical	3	5	junction_23	42.402785513238	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCCTTGATTCCTGAGT	18	True	NA	12	True	NA	NA	NA	37433234	37482833	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_37433378_37435623_37435763_37443998_37444151_37446290_37446450_37450250_37450344_37451805_37451878_37453046_37453142_37453239_37453313_37458611_37458811_37459565_37459685_37461548_37461646_37461969_37462103_37462828_37463009_37471020_37471078_37471846_37471905_37472418_37472488_37473469_37473602_37474523_37474647_37475320_37475413_37476125_37476195_37477591_37477640_37478408_37478522_37479146_37479256_37482491
H1_mix_00074106	chr6	+	550	2	FSM	ENSG00000137200.13	ENST00000493656.1	550	2	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACCAGCCGTCCTGCCA	NA	False	NA	NA	False	NA	NA	NA	37459658	37462072	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_37459685_37461548
H1_mix_00074107	chr6	+	1032	7	FSM	ENSG00000137200.13	ENST00000475364.1	1032	7	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	71.6286720990042	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACAAGAAAACCAAGGACT	NA	False	NA	NA	False	NA	NA	NA	37473567	37479195	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_37473602_37474523_37474647_37475320_37475917_37476125_37476195_37477591_37477640_37478408_37478522_37479146
H1_mix_00074113	chr6	+	1854	3	FSM	ENSG00000146122.17	ENST00000475489.5	2186	3	0	332	0	-332	multi-exon	FALSE	canonical	2	5	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTGCTAAAACAAACAAACAA	18	True	NA	NA	False	NA	NA	NA	39792395	39862487	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_39792466_39856246_39856471_39860927
H1_mix_00074114	chr6	+	3827	26	FSM	ENSG00000146122.17	ENST00000633794.1	3871	26	44	0	-32	0	multi-exon	TRUE	canonical	2	3	junction_21	1.74355957741627	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGGGAATCTGGTGAGG	NA	False	NA	NA	False	NA	NA	NA	39792341	39902450	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_39792466_39856246_39856471_39860927_39861018_39864432_39864508_39864979_39865075_39867509_39867844_39868822_39868934_39870339_39870444_39871505_39871573_39873237_39873356_39875329_39875469_39878202_39878262_39878403_39878589_39879177_39879478_39883961_39884070_39886420_39886448_39887485_39887593_39888678_39888764_39891340_39891448_39891633_39891723_39896811_39896981_39897174_39897283_39898876_39898938_39900076_39900209_39901301_39901473_39901812
H1_mix_00074118	chr6	+	6354	9	FSM	ENSG00000161912.18_ENSG00000001167.15	ENST00000353205.5	1660	9	-130	-4564	-121	111	multi-exon	FALSE	canonical	3	67	junction_5	17.0545998194036	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAGATATTTGCCAGATA	804	False	NA	NA	False	NA	NA	NA	41072852	41102514	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_41073085_41079028_41079165_41084045_41084193_41089578_41089711_41090203_41090310_41091527_41091695_41092911_41093086_41094395_41094498_41097356
H1_mix_00074123	chr6	+	1624	5	FSM	ENSG00000112559.15	ENST00000230321.11	1606	5	-23	5	7	0	multi-exon	FALSE	canonical	3	138	junction_2	13.6267200749116	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGATTTCCTCAGGACT	-30	True	NA	8	True	AATAAA	-13	NA	41638444	41654239	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_41638653_41638738_41638826_41646125_41646309_41649618_41649844_41653318
H1_mix_00074125	chr6	+	1587	5	NNC	ENSG00000112559.15	novel	1606	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_2	50.2742478809977	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGATTTCCTCAGGACT	2	True	NA	8	True	AATAAA	-13	NA	41638476	41654239	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_41638653_41638738_41638826_41646130_41646309_41649618_41649844_41653318
H1_mix_00074127	chr6	+	565	3	FSM	ENSG00000214736.8	ENST00000398881.4	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	893	junction_2	243	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTTTATTCTTTTAATA	16	True	NA	31	True	AATAAA	-18	NA	41787693	41789895	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_41787826_41789231_41789337_41789567
H1_mix_00074128	chr6	+	1718	7	FSM	ENSG00000112578.10	ENST00000230340.9	1718	7	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	13.1497781983829	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTGTTTGGTGTAGTC	-1	True	NA	24	True	GATAAA	-24	NA	41921498	41933046	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_41921831_41927373_41927537_41930131_41930271_41930634_41930769_41931395_41931557_41931727_41931831_41932360
H1_mix_00074130	chr6	+	6726	9	FSM	ENSG00000137413.17	ENST00000372977.8	6678	9	-54	6	-43	-6	multi-exon	FALSE	canonical	3	14	junction_8	38.413661306884	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTGGCTGCATGGTTGTT	NA	False	NA	4	True	AATAAA	-13	NA	42050469	42083266	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_42050587_42051356_42051514_42055530_42055630_42055951_42056015_42057388_42057514_42066311_42066460_42068464_42068608_42077099_42077240_42077532
H1_mix_00074133	chr6	+	7924	47	FSM	ENSG00000024048.11	ENST00000372899.6	7891	47	-33	0	-33	0	multi-exon	TRUE	canonical	2	11	junction_10	31.2099497609845	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGGTTAGCATATATCT	-14	True	NA	6	True	AATAAA	-21	NA	42563995	42693505	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_42564398_42573733_42573994_42592150_42592230_42594190_42594305_42603587_42603719_42605720_42605860_42606588_42606652_42612170_42612292_42615070_42615179_42616001_42616091_42617239_42617339_42632551_42632716_42632804_42632905_42635417_42635547_42637010_42637195_42640208_42640271_42641581_42641693_42642415_42642482_42644213_42644337_42644472_42644537_42645465_42645591_42648117_42648171_42650283_42650387_42652022_42652072_42652490_42652646_42655620_42655724_42658023_42658134_42658239_42658321_42658645_42658825_42659655_42659856_42662183_42662278_42663257_42663420_42665408_42665513_42666166_42666246_42670091_42670241_42670659_42670716_42673790_42673888_42674125_42674194_42676055_42676192_42676782_42676874_42678538_42678670_42679723_42679833_42683054_42683112_42684793_42684872_42688215_42688387_42689568_42689671_42691031
H1_mix_00074139	chr6	+	3769	7	FSM	ENSG00000146223.16	ENST00000304734.9	3769	7	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_6	147.758436495368	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGTTGAACAAGTTGTGAG	43	False	NA	54	True	NA	NA	NA	42879681	42889925	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_42879952_42880860_42880967_42883450_42883615_42884612_42884751_42885973_42886084_42886255_42886471_42887159
H1_mix_00074140	chr6	+	707	5	FSM	ENSG00000146223.16	ENST00000602561.1	703	5	-4	0	0	0	multi-exon	FALSE	canonical	3	424	junction_2	60.2966624283633	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTAGGGAAGTTTGGCGTC	4	True	NA	1	True	AATAAA	-21	NA	42879928	42886249	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_42879952_42880860_42880967_42883450_42883615_42884612_42884751_42885973
H1_mix_00074142	chr6	+	1431	6	FSM	ENSG00000137161.18	ENST00000372836.5	1431	6	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_2	80.8613628378844	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGCCTCTTGTTCTTT	-1	True	NA	48	True	NA	NA	NA	42929479	42939294	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_42929722_42934474_42934599_42935573_42935671_42937716_42937840_42938089_42938208_42938567
H1_mix_00074155	chr6	+	4229	20	FSM	ENSG00000112655.16	ENST00000230419.9	4222	20	-7	0	0	0	multi-exon	FALSE	canonical	3	804	junction_5	62.0897839764178	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTTCTGAGATTCATTC	0	True	NA	15	True	AATAAA	-17	NA	43076306	43161715	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43076568_43128976_43129265_43129726_43129830_43130229_43130421_43130510_43130662_43132015_43132165_43132420_43132688_43138848_43138983_43139135_43139272_43139405_43139526_43141667_43141818_43141930_43142082_43142171_43142300_43143416_43143621_43144450_43144607_43145199_43145433_43146617_43146699_43158816_43158969_43159787_43159967_43160720
H1_mix_00074156	chr6	+	3804	17	FSM	ENSG00000112655.16	ENST00000349241.6	3801	17	-3	0	0	0	multi-exon	FALSE	canonical	3	27	junction_7	227.430956212539	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTGTTTCTGAGATTCA	32	True	NA	12	True	AATAAA	-14	NA	43076338	43161712	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43076568_43128976_43129265_43129726_43129830_43130229_43130421_43130510_43130662_43132015_43132165_43132420_43132688_43141667_43141818_43141930_43142082_43142171_43142300_43143416_43143621_43144450_43144607_43145199_43145433_43146617_43146699_43158816_43158969_43159787_43159967_43160720
H1_mix_00074157	chr6	+	4074	19	FSM	ENSG00000112655.16	ENST00000345201.6	4071	19	-3	0	0	0	multi-exon	FALSE	canonical	3	59	junction_9	210.15861881381	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTGTTTCTGAGATTCA	32	True	NA	12	True	AATAAA	-14	NA	43076338	43161712	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43076568_43128976_43129265_43129726_43129830_43130229_43130421_43130510_43130662_43132015_43132165_43132420_43132688_43138848_43138983_43139135_43139272_43141667_43141818_43141930_43142082_43142171_43142300_43143416_43143621_43144450_43144607_43145199_43145433_43146617_43146699_43158816_43158969_43159787_43159967_43160720
H1_mix_00074158	chr6	+	5282	19	FSM	ENSG00000112655.16	ENST00000487673.5	5282	19	0	0	0	0	multi-exon	FALSE	canonical	3	804	junction_5	63.5419565870739	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGTTTCTGAGATTCAT	16	False	NA	13	True	AATAAA	-15	NA	43076368	43161713	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43076568_43128976_43129265_43129726_43129830_43130229_43130421_43130510_43130662_43132015_43132165_43132420_43132688_43138848_43138983_43139135_43139272_43139405_43139526_43141667_43141818_43141930_43142082_43142171_43143621_43144450_43144607_43145199_43145433_43146617_43146699_43158816_43158969_43159787_43159967_43160720
H1_mix_00074161	chr6	+	2011	5	FSM	ENSG00000112659.14	ENST00000451399.5	2572	5	-3	564	-3	-564	multi-exon	FALSE	canonical	1	2	junction_4	8.78564169540279	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTGCAAGCTGCAGTAG	-16	True	NA	NA	False	NA	NA	NA	43182180	43188394	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43182250_43184301_43184906_43185455_43185611_43185954_43186456_43187712
H1_mix_00074162	chr6	+	7868	41	FSM	ENSG00000112659.14	ENST00000252050.9	7759	41	-112	3	-100	0	multi-exon	TRUE	canonical	2	10	junction_12	8.65736680521277	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCTCTGGGAGCAGGCTG	7201	False	NA	10	True	AATAAA	-17	NA	43182083	43224584	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43182250_43184301_43184906_43185455_43185611_43185954_43186456_43186959_43187096_43187245_43187440_43187712_43188119_43188522_43188716_43193000_43193209_43196068_43196266_43196644_43196863_43198608_43198856_43199265_43199372_43199928_43200157_43200435_43200527_43200662_43200835_43202715_43202822_43203108_43203205_43203416_43203593_43203853_43203988_43204359_43204540_43204747_43204858_43204932_43205116_43205262_43205424_43206006_43206236_43206320_43206511_43213148_43213295_43213437_43213568_43213712_43213913_43215078_43215327_43216157_43216504_43220458_43220600_43220746_43220912_43221157_43221322_43221684_43221779_43222315_43222391_43222530_43222642_43222778_43222897_43223263_43223398_43224094_43224169_43224249
H1_mix_00074172	chr6	+	2708	11	FSM	ENSG00000137221.14	ENST00000372445.9	2751	11	43	0	-3	0	multi-exon	FALSE	canonical	3	9	junction_8	50.3368652182474	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAACTTGTCTTAATGAC	-13	True	NA	17	True	AATAAA	-18	NA	43477565	43506556	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43477629_43478086_43478233_43497880_43497978_43498974_43499101_43500743_43500773_43501525_43501688_43502282_43502350_43502587_43502618_43503400_43503509_43503622_43503707_43504760
H1_mix_00074173	chr6	+	2735	11	FSM	ENSG00000137221.14	ENST00000372444.6	2778	11	43	0	-3	0	multi-exon	FALSE	canonical	3	24	junction_3	46.2017315692821	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAACTTGTCTTAATGAC	-13	True	NA	17	True	AATAAA	-18	NA	43477565	43506556	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43477629_43478086_43478233_43478658_43478719_43497880_43497978_43498977_43499101_43500743_43500773_43501525_43501688_43502282_43502350_43503400_43503509_43503622_43503707_43504760
H1_mix_00074174	chr6	+	2675	10	NIC	ENSG00000137221.14	novel	2720	10	NA	NA	-3	0	intron_retention	FALSE	canonical	3	76	junction_3	23.2814237399267	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCCTAACTTGTCTTAAT	-13	True	NA	14	True	AATAAA	-15	NA	43477565	43506553	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_43477629_43478086_43478233_43497880_43497978_43498974_43499101_43500743_43500773_43501525_43501688_43502282_43502350_43503400_43503509_43503622_43503707_43504760
H1_mix_00074177	chr6	+	3268	4	FSM	ENSG00000137221.14	ENST00000454762.1	3268	4	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	6.97614984548545	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCCTAACTTGTCTTAAT	NA	False	NA	14	True	AATAAA	-15	NA	43501525	43506553	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43501688_43502282_43502350_43503400_43503509_43503622
H1_mix_00074178	chr6	+	1731	6	FSM	ENSG00000171453.20	ENST00000481352.6	1725	6	-6	0	-6	0	multi-exon	FALSE	canonical	3	322	junction_5	5.41848687365763	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTAGATGTAAATAAACTCA	7807	False	NA	-28	True	CATAAA	-28	NA	43517047	43521479	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43517179_43517305_43517378_43519332_43519441_43519705_43520428_43520624_43520775_43520931
H1_mix_00074179	chr6	+	569	3	FSM	ENSG00000171453.20	ENST00000512472.5	569	3	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_1	3.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTGTACAATAATACATCC	-13	True	NA	NA	False	NA	NA	NA	43517082	43519733	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43517179_43517305_43517378_43519332
H1_mix_00074181	chr6	+	1269	9	FSM	ENSG00000171453.20	ENST00000304004.7	1280	9	-6	17	0	-17	multi-exon	FALSE	canonical	1	1	junction_8	110.391066214617	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAGAAAGAGATTC	-13	True	NA	NA	False	NA	NA	NA	43517082	43529568	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43517179_43517305_43517378_43519332_43519441_43519705_43519839_43520065_43520186_43520274_43520428_43520624_43520775_43520931_43521049_43529248
H1_mix_00074184	chr6	+	1517	4	FSM	ENSG00000124688.14	ENST00000451025.6	1517	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	143.799242773466	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAATAGATTCTTATTA	47	False	NA	-10	True	AATATA	-1	NA	43629539	43640919	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43629770_43633193_43633316_43636380_43636647_43640020
H1_mix_00074185	chr6	+	1269	3	FSM	ENSG00000124688.14	ENST00000372171.5	1269	3	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_2	10	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCTGAAATTGTTTTGA	-2	True	NA	12	True	AATAAA	-16	NA	43635839	43640941	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43635922_43636380_43636647_43640020
H1_mix_00074187	chr6	+	1661	4	FSM	ENSG00000112715.26	ENST00000476772.5	1683	4	22	0	-5	0	multi-exon	FALSE	canonical	3	439	junction_3	24.589970855344	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGTGTTGCTCCATAATA	-5	True	NA	NA	False	ATTAAA	-24	NA	43770205	43778764	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43771313_43774340_43774393_43777468_43777666_43778459
H1_mix_00074188	chr6	+	3581	8	FSM	ENSG00000112715.26	ENST00000672860.3	3609	8	-20	48	7	0	multi-exon	FALSE	canonical	3	99	junction_5	149.418737726142	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGCATTTTG	NA	False	NA	-6	True	AATACA	-11	NA	43770190	43786439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43771313_43774340_43774393_43777468_43777666_43778459_43778537_43778888_43778919_43780731_43780804_43781955_43782088_43784540
H1_mix_00074189	chr6	+	3557	7	FSM	ENSG00000112715.26	ENST00000372067.8	3535	7	-22	0	7	0	multi-exon	FALSE	canonical	3	171	junction_5	110.152419653658	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTCTTGGTTTCTCCTT	NA	False	NA	42	True	ATTAAA	-22	NA	43770190	43786487	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43771313_43774340_43774393_43777468_43777666_43778459_43778537_43778888_43778919_43781955_43782088_43784540
H1_mix_00074191	chr6	+	2909	6	FSM	ENSG00000112715.26	ENST00000372064.9	2909	6	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_5	139.930554204577	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTCTTGGTTTCTCCTT	496	False	NA	42	True	ATTAAA	-22	NA	43770706	43786487	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43771313_43774340_43774393_43777468_43777666_43778459_43778537_43778888_43778919_43784540
H1_mix_00074195	chr6	+	2746	3	FSM	ENSG00000112715.26	ENST00000497139.5	2746	3	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_2	151.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGCATTTTG	9	False	NA	-6	True	AATACA	-11	NA	43777719	43786439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43778537_43778888_43778919_43784540
H1_mix_00074196	chr6	+	2715	3	FSM	ENSG00000181577.16	ENST00000442114.6	3109	3	394	0	342	0	multi-exon	FALSE	canonical	3	10	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTTGTAGACTCTAAAGG	312	False	NA	NA	False	AATGAA	-20	NA	44000973	44005150	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_44001144_44002052_44002128_44002680
H1_mix_00074205	chr6	+	2011	13	FSM	ENSG00000112759.19	ENST00000652680.1	1998	13	-13	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	623.375683721747	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATACTCCATTCTCCCC	-9	True	NA	123	True	NA	NA	NA	44219614	44233946	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_44219783_44227259_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
H1_mix_00074207	chr6	+	2304	14	FSM	ENSG00000112759.19	ENST00000371713.6	2283	14	-21	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	806.219110687578	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGGCTCCCTGTGTCCT	-9	True	NA	79	True	AATAAA	-18	NA	44219614	44234142	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_44219783_44221585_44221686_44227262_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
H1_mix_00074208	chr6	+	938	8	FSM	ENSG00000112759.19	ENST00000371740.10	928	8	-10	0	-10	0	multi-exon	FALSE	canonical	3	239	junction_2	948.347262669242	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTAAATGGAGGGAGCT	6	False	NA	NA	False	NA	NA	NA	44223548	44230665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_44223642_44226060_44226168_44227262_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567
H1_mix_00074210	chr6	+	1493	10	FSM	ENSG00000112759.19	ENST00000472176.2	1434	10	-36	-23	0	0	multi-exon	FALSE	canonical	3	1352	junction_1	326.564080641812	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGGAGGAAGAGGGCC	-20	True	NA	NA	False	NA	NA	NA	44223558	44232428	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_44223642_44227262_44227343_44229389_44229472_44229588_44229792_44229906_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342
H1_mix_00074211	chr6	+	2189	14	NIC	ENSG00000112759.19	novel	2083	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	239	junction_2	717.136762476081	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCATGGCTCCCTGTGTCC	16	True	NA	78	True	AATAAA	-17	NA	44223594	44234141	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_44223642_44226060_44226168_44227262_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
H1_mix_00074212	chr6	+	2083	13	FSM	ENSG00000112759.19	ENST00000371755.9	2083	13	0	0	0	0	multi-exon	FALSE	canonical	3	1352	junction_1	289.070925552882	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGGCTCCCTGTGTCCT	16	True	NA	79	True	AATAAA	-18	NA	44223594	44234142	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_44223642_44227262_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
H1_mix_00074213	chr6	+	2114	13	NIC	ENSG00000112759.19	novel	2083	13	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	3	279	junction_1	556.711543849735	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTTCTTGTTTTTTTCTC	6	False	NA	61	True	TTTAAA	-4	NA	44223548	44234124	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_44223642_44227259_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
H1_mix_00074215	chr6	+	2309	14	FSM	ENSG00000112759.19	ENST00000371724.6	2301	14	-8	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	781.121724143551	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCATGGCTCCCTGTGTCC	-6	True	NA	78	True	AATAAA	-17	NA	44223791	44234141	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_44223956_44226060_44226168_44227259_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
H1_mix_00074219	chr6	+	3320	12	FSM	ENSG00000096384.20	ENST00000353801.7	2582	12	0	-738	0	733	multi-exon	FALSE	canonical	3	125	junction_1	3838.47748742748	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGCCAGCTCCCTCAGAG	546	False	NA	NA	False	AAAACA	-16	NA	44247086	44254621	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_44247196_44248616_44248777_44249376_44249584_44249674_44249835_44250020_44250155_44250290_44250600_44251047_44251214_44251417_44251609_44251736_44251885_44251998_44252268_44253044_44253379_44253488
H1_mix_00074220	chr6	+	3412	12	FSM	ENSG00000096384.20	ENST00000371554.2	2674	12	0	-738	0	733	multi-exon	FALSE	canonical	3	24	junction_1	3866.29600222998	3086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGCCAGCTCCCTCAGAG	415	False	NA	NA	False	AAAACA	-16	NA	44247865	44254621	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_44248080_44248629_44248777_44249376_44249584_44249674_44249835_44250020_44250155_44250290_44250600_44251047_44251214_44251417_44251609_44251736_44251885_44251998_44252268_44253044_44253379_44253488
H1_mix_00074223	chr6	+	6241	16	FSM	ENSG00000096401.8	ENST00000371477.4	6241	16	0	0	0	0	multi-exon	TRUE	canonical	3	267	junction_10	23.9707228834584	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTCCTTTTATGTTTA	-4	True	NA	NA	False	ATTAAA	-19	NA	44387705	44450425	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_44387869_44390267_44390372_44392666_44392829_44393445_44393574_44396340_44396441_44403808_44404028_44406322_44406468_44408443_44408633_44419448_44419598_44422646_44422810_44424418_44424584_44426102_44426184_44426481_44426725_44429712_44429911_44445654_44445868_44446606
H1_mix_00074227	chr6	+	1748	9	NNC	ENSG00000031691.7	novel	1741	9	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_1	51.2054684579684	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGTGACCTATAATATCA	-11	True	NA	79	True	AATAAA	-19	NA	49463380	49493106	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_49463454_49470139_49470279_49470973_49471029_49472062_49472184_49472789_49472859_49480950_49481081_49488351_49488472_49488606_49488685_49492143
H1_mix_00074230	chr6	+	2402	4	NIC	ENSG00000197261.12	novel	1692	3	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	13.6950923894494	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACATTTTTATTTTTCTTT	51	False	NA	8	True	AATAAA	-22	NA	49550645	49560934	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_49551676_49551880_49552571_49554876_49555158_49560533
H1_mix_00074236	chr6	+	6825	11	FSM	ENSG00000096093.16	ENST00000371068.11	6849	11	0	24	0	-24	multi-exon	FALSE	canonical	3	62	junction_4	9.8264947972306	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTATTGCTATCCAGCAC	-17	True	NA	9	True	AATAAA	-6	NA	52420341	52497174	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_52420474_52423945_52424168_52438303_52438592_52452687_52452838_52454094_52454288_52464894_52465116_52469332_52469474_52479036_52479251_52479639_52479788_52490139_52490351_52492269
H1_mix_00074237	chr6	+	2539	3	FSM	ENSG00000225791.7	ENST00000606714.6	2500	3	-58	19	-2	0	multi-exon	FALSE	canonical	3	24	junction_1	6.5	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTAATGCTAAAATTGAC	NA	False	NA	1	True	AATAAA	-2	NA	52577201	52583974	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_52578394_52579374_52579610_52582862
H1_mix_00074238	chr6	+	2767	3	FSM	ENSG00000225791.7	ENST00000663931.1	2744	3	-23	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	3.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGCTAAAATTGACTGAAAA	NA	False	NA	7	True	AATAAA	-8	NA	52577180	52583980	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_52578595_52579374_52579610_52582862
H1_mix_00074240	chr6	+	3767	2	FSM	ENSG00000216775.4	ENST00000602367.2	3757	2	-10	0	-10	0	multi-exon	FALSE	canonical	3	102	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTGTATTTTATTTTGT	202	False	NA	22	True	AATAAA	-18	NA	52664419	52669155	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_52665420_52666388
H1_mix_00074243	chr6	+	2238	13	NNC	ENSG00000112146.17	novel	4743	13	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_3	98.8078944214479	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATATATTTGGATGGCC	-8	True	NA	NA	False	AATAAA	-26	NA	53065403	53098368	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_53065793_53071056_53071144_53073480_53073638_53076483_53076544_53078798_53078899_53080967_53081099_53082503_53082619_53092428_53092548_53092733_53092825_53093465_53093562_53093884_53093979_53095512_53095665_53097721
H1_mix_00074257	chr6	+	3938	13	FSM	ENSG00000112200.17	ENST00000491832.6	3632	13	-155	-151	4	151	multi-exon	FALSE	canonical	3	193	junction_7	65.1030699907633	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGTTATAACCCCCTTT	-6	True	NA	NA	False	NA	NA	NA	57090033	57154695	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_57090275_57090810_57090895_57099060_57099142_57124733_57124860_57128728_57128841_57133041_57133193_57134743_57134871_57141301_57141456_57141947_57142096_57147089_57148694_57150718_57150863_57152220_57152352_57153860
H1_mix_00074259	chr6	+	5107	15	FSM	ENSG00000112200.17	ENST00000370706.9	5088	15	-19	0	0	0	multi-exon	FALSE	canonical	3	193	junction_7	60.5099502696264	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTTATCTTTTCATTAC	7	True	NA	14	True	AGTAAA	-20	NA	57090168	57170305	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_57090275_57090810_57090895_57099060_57099142_57124733_57124860_57128728_57128841_57133041_57133193_57134743_57134871_57141301_57141456_57141947_57142096_57147089_57148694_57150718_57150863_57152220_57152352_57153860_57154048_57161083_57161153_57168422
H1_mix_00074260	chr6	+	6675	3	FSM	ENSG00000112208.11	ENST00000370693.5	6651	3	-24	0	-24	0	multi-exon	FALSE	canonical	3	210	junction_2	16.5	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAATGGTTTTATAAGTG	-18	True	NA	5	True	AATAAA	-16	NA	57172301	57189833	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_57172811_57182031_57182142_57183777
H1_mix_00074261	chr6	+	1283	6	FSM	ENSG00000146143.19	ENST00000671770.1	1266	6	-17	0	-11	0	multi-exon	FALSE	canonical	3	10	junction_5	53.7564879805219	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTGTCCTGTTATTTA	-10	True	NA	NA	False	AATAAA	-17	NA	57317612	57378976	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_57317702_57318436_57318600_57320456_57320561_57324200_57324281_57325924_57326046_57378250
H1_mix_00074266	chr6	+	6056	4	Intergenic	novelGene_1275	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_3	32.7142510570275	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATTCTCCATGGGTGCT	-22	True	NA	10	True	AATAAA	-16	NA	62797346	62897947	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_62797516_62823708_62823785_62887209_62887340_62892266
H1_mix_00074271	chr6	+	18596	15	NIC	ENSG00000118482.12	novel	18797	16	NA	NA	-57	11	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	30.9157017103752	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTCATATTTTATGATAAA	NA	False	NA	NA	False	ATTAAA	-26	NA	63635744	63726022	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_63636151_63679999_63680162_63684128_63685912_63691736_63692044_63694580_63694765_63698222_63698368_63698448_63698606_63700349_63700467_63702507_63702640_63703535_63703672_63706028_63706225_63706728_63706877_63709150_63709241_63711166_63711363_63711585
H1_mix_00074276	chr6	+	334	3	FSM	ENSG00000135298.15	ENST00000604969.1	590	3	256	0	256	0	multi-exon	FALSE	canonical	1	1	junction_1	1	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGACTGGTAATTATTCT	184	False	NA	NA	False	NA	NA	NA	69233289	69239226	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_69233417_69235031_69235136_69239123
H1_mix_00074281	chr6	+	6219	23	NIC	ENSG00000082269.17	novel	6215	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	67	junction_15	35.3608610736188	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACCCTTGTAATCCTTTG	82	False	NA	22	True	AATAAA	-30	NA	70413577	70561170	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_70413703_70415290_70415377_70426438_70426533_70428303_70428420_70452491_70452572_70475409_70475550_70475662_70475734_70477158_70477333_70480900_70481028_70482000_70482155_70486166_70486245_70491033_70491084_70502635_70502792_70522512_70522587_70523966_70524122_70524342_70526699_70528291_70528453_70533159_70533252_70533756_70533855_70536259_70536412_70538290_70538402_70556749_70556864_70559715
H1_mix_00074282	chr6	+	2475	4	FSM	ENSG00000082269.17	ENST00000425415.2	2475	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	13.490737563232	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGTAGT	4918	False	NA	NA	False	NA	NA	NA	70482132	70504960	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_70482155_70486166_70486245_70491033_70491084_70502635
H1_mix_00074286	chr6	+	611	1	FSM	ENSG00000271967.1	ENST00000606298.1	543	1	-140	72	-140	-72	mono-exon	FALSE	NA	NA	NA	NA	NA	502	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATATTAGTAATTTGATA	NA	False	NA	NA	False	NA	NA	NA	70596297	70596908	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_70596300_70596900
H1_mix_00074292	chr6	+	2830	13	FSM	ENSG00000185760.18	ENST00000629977.2	2830	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.51978534699048	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATATCATTGCATGAACT	60	False	NA	NA	False	NA	NA	NA	72622171	73195454	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_72622588_73003907_73003999_73041935_73042063_73077321_73077498_73077761_73077888_73105256_73105368_73111307_73111404_73120482_73120578_73133420_73133642_73169745_73169855_73190572_73190705_73192564_73192692_73194451
H1_mix_00074297	chr6	+	2961	13	FSM	ENSG00000135297.17	ENST00000370300.8	2961	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	70.508224500566	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGAAATTGTCATGGCCA	17	True	NA	NA	False	CATAAA	-10	NA	73461764	73501452	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_73462072_73466208_73466409_73466488_73466607_73473364_73473655_73479731_73479845_73479935_73480127_73480292_73480368_73480674_73480806_73482039_73482245_73482448_73482621_73492233_73492353_73497735_73497897_73500573
H1_mix_00074298	chr6	+	9171	33	FSM	ENSG00000156535.15	ENST00000287097.6	9031	33	-144	4	-144	-4	multi-exon	FALSE	canonical	3	11	junction_25	5.70087712549569	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTTATTATGTGTTCTT	6	False	NA	3	True	AATAAA	-15	NA	73696058	73828309	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_73696290_73697399_73697573_73723250_73723280_73730343_73730575_73736382_73736509_73756642_73756683_73758943_73759029_73762383_73762481_73762740_73762883_73763575_73763686_73765929_73766155_73766758_73766861_73766947_73767011_73768054_73768232_73771428_73771582_73780423_73780499_73781258_73781320_73782613_73782756_73783706_73783825_73785363_73785478_73787233_73787453_73788467_73788613_73792625_73792803_73803219_73803302_73806843_73807073_73808082_73808249_73809983_73810175_73810991_73811148_73812204_73812271_73814980_73815124_73818387_73818536_73820460_73820564_73823457
H1_mix_00074300	chr6	+	4791	25	NIC	ENSG00000112701.18	novel	6671	24	NA	NA	-45	0	combination_of_known_junctions	TRUE	canonical	3	101	junction_3	133.41247651134	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAATAAAAAGAAAATATT	NA	False	NA	-20	True	NA	NA	NA	75601463	75715877	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_75602577_75621531_75621626_75622750_75622859_75623899_75623961_75633580_75633727_75634706_75634812_75640683_75640705_75647730_75647802_75659261_75659408_75663220_75663519_75666711_75666942_75670552_75670721_75675434_75675469_75675859_75676055_75677029_75677257_75678582_75678693_75678810_75678928_75695803_75695924_75697424_75697518_75702644_75703073_75709526_75709631_75711327_75711417_75713512_75713582_75713674_75713826_75715384
H1_mix_00074302	chr6	+	4381	24	NIC	ENSG00000112701.18	novel	6671	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	101	junction_3	139.465411963739	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATGATTAATTTGATAT	0	True	NA	7	True	AATAAA	-19	NA	75601879	75715904	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_75602577_75621531_75621626_75622750_75622859_75623899_75623961_75633580_75633727_75634706_75634812_75647730_75647802_75659261_75659408_75663220_75663519_75666711_75666942_75670552_75670721_75675434_75675469_75675859_75676055_75677029_75677257_75678582_75678693_75678810_75678928_75695803_75695924_75697424_75697518_75702644_75703073_75709526_75709631_75711327_75711417_75713512_75713582_75713674_75713826_75715384
H1_mix_00074305	chr6	+	2700	15	FSM	ENSG00000112701.18	ENST00000327284.12	2700	15	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_5	114.920846761622	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTTATGTCTTTGTTTT	-1	True	NA	12	True	ATTAAA	-17	NA	75601926	75678975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_75602577_75621531_75621626_75623899_75623961_75633580_75633727_75634706_75634812_75647730_75647802_75659261_75659408_75663220_75663519_75666711_75666942_75670552_75670721_75675434_75675469_75675859_75676055_75677029_75677257_75678582_75678693_75678810
H1_mix_00074307	chr6	+	2685	13	FSM	ENSG00000112701.18	ENST00000424947.6	2685	13	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_2	109.397942038332	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGGAATCTGCTGAATTG	86	False	NA	82	True	ATTAAA	-25	NA	75633703	75679867	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_75633727_75634706_75634812_75640683_75640705_75647730_75647802_75659261_75659408_75663220_75663519_75666711_75666942_75670552_75670721_75675434_75675469_75675859_75676055_75677029_75677257_75678582_75678693_75678810
H1_mix_00074319	chr6	+	2966	22	FSM	ENSG00000112742.10	ENST00000369798.7	2966	22	0	0	0	0	multi-exon	TRUE	canonical	3	319	junction_8	33.7863099380359	248	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTTGTAAGGTTGTTTT	-6	True	NA	25	True	AATAAA	-30	NA	80004648	80042527	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_80004714_80005841_80005983_80007808_80008032_80008385_80008493_80010813_80010958_80011433_80011549_80011728_80011802_80011885_80011981_80013278_80013367_80014462_80014587_80022323_80022473_80026377_80026515_80027884_80028012_80031466_80031560_80034984_80035143_80035265_80035418_80036474_80036600_80037966_80038048_80039695_80039873_80040195_80040281_80040605_80040704_80042118
H1_mix_00074322	chr6	+	1523	11	FSM	ENSG00000083123.15	ENST00000356489.9	1514	11	-9	0	-9	0	multi-exon	FALSE	canonical	3	332	junction_10	67.1997767853436	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAATCAAATTGTCTTTG	-1	True	NA	-13	True	AATAAA	-1	NA	80106637	80346254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_80106890_80127546_80127625_80129160_80129230_80167677_80167812_80168874_80169031_80171281_80171391_80200933_80201032_80203101_80203213_80273134_80273222_80343663_80343813_80345974
H1_mix_00074323	chr6	+	3692	10	FSM	ENSG00000083123.15	ENST00000320393.9	3668	10	-24	0	0	0	multi-exon	FALSE	canonical	3	463	junction_3	38.7817571979149	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTGTATGTGTTCTT	8	True	NA	3	True	AATAAA	-17	NA	80106646	80346270	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_80106890_80127546_80127625_80129160_80129230_80167677_80167812_80168874_80169031_80171281_80171391_80200933_80201032_80203101_80203213_80273134_80273222_80343663
H1_mix_00074329	chr6	+	4241	2	FSM	ENSG00000146242.9	ENST00000369750.4	2890	2	-833	-518	-222	518	multi-exon	FALSE	canonical	3	223	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTTTCCTTTGAACTG	3	True	NA	NA	False	NA	NA	NA	82362983	82367938	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_82363909_82364622
H1_mix_00074330	chr6	+	2902	2	FSM	ENSG00000146242.9	ENST00000543496.3	2881	2	-21	0	-21	0	multi-exon	FALSE	canonical	3	88	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTCTCAATGTCTTA	32	False	NA	NA	False	AATAAA	-22	NA	82364222	82367417	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_82364330_82364622
H1_mix_00074331	chr6	+	7505	38	NIC	ENSG00000083097.15	novel	7957	39	NA	NA	-5	-292	combination_of_known_junctions	TRUE	canonical	3	12	junction_1	11.2691359854379	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACTCAAATGCCTTCCCT	-36	True	NA	NA	False	NA	NA	NA	83067660	83168039	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_83067780_83096730_83096824_83096924_83097116_83100704_83100887_83108909_83109081_83110124_83110315_83113322_83113422_83118887_83118988_83119747_83119858_83120682_83120792_83121929_83122051_83122862_83122983_83124704_83124820_83125499_83125734_83128886_83129509_83130122_83130398_83132175_83132329_83134186_83134288_83135618_83135879_83137172_83139163_83139999_83140112_83140220_83140404_83141920_83142047_83145523_83145659_83147235_83147292_83148758_83148864_83151592_83151660_83151882_83152028_83152287_83152368_83153510_83153621_83153893_83154044_83154179_83154242_83155950_83156104_83157181_83157319_83158566_83158623_83159795_83159961_83162789_83162920_83167861
H1_mix_00074332	chr6	+	511	4	FSM	ENSG00000083097.15	ENST00000604380.1	511	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	2.05480466765633	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGGAGAAAATCCACCAAG	NA	False	NA	NA	False	NA	NA	NA	83122862	83128928	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_83122983_83124704_83124820_83125499_83125734_83128886
H1_mix_00074336	chr6	+	518	3	FSM	ENSG00000203877.9	ENST00000369687.2	521	3	0	3	0	-1	multi-exon	FALSE	canonical	3	14	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTATTCTGGTATTTGGC	-15	True	NA	NA	False	AATAAA	-14	NA	83853591	83857512	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_83853774_83854096_83854162_83857241
H1_mix_00074344	chr6	+	966	6	NIC	ENSG00000111850.11	novel	1214	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_5	2.0976176963403	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCCCCACCCTCTTTTT	4	True	NA	NA	False	AGTAAA	-27	NA	87322604	87399749	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_87322633_87371592_87371713_87375461_87375711_87392724_87392843_87398242_87398378_87399433
H1_mix_00074347	chr6	+	533	4	FSM	ENSG00000135336.16	ENST00000468486.2	471	4	-62	0	1	0	multi-exon	FALSE	canonical	3	100	junction_3	438.877608856451	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTACCACCTTGGCCTTA	NA	False	NA	21	True	AATAAA	-17	NA	87590067	87595437	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_87590193_87594352_87594408_87594526_87594614_87595171
H1_mix_00074348	chr6	+	2568	20	FSM	ENSG00000135336.16	ENST00000257789.4	2501	20	-67	0	1	0	multi-exon	FALSE	canonical	3	277	junction_14	144.243599741833	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGCAGTTGCTTTAGC	NA	False	NA	16	True	AATAAA	-23	NA	87590067	87667451	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_87590193_87594352_87594408_87601783_87601882_87603383_87603529_87605916_87606022_87607672_87607825_87609095_87609230_87612088_87612249_87616313_87616428_87621353_87621488_87621949_87622014_87634844_87634962_87636406_87636487_87653115_87653250_87656902_87656983_87657920_87658019_87663002_87663145_87664742_87664860_87665753_87665834_87667017
H1_mix_00074350	chr6	+	2565	20	FSM	ENSG00000135336.16	ENST00000392844.8	2498	20	-67	0	1	0	multi-exon	FALSE	canonical	3	361	junction_14	132.734337803497	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGCAGTTGCTTTAGC	NA	False	NA	16	True	AATAAA	-23	NA	87590067	87667451	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_87590193_87594352_87594408_87601783_87601882_87603383_87603529_87605916_87606022_87607672_87607825_87609095_87609230_87612088_87612249_87616313_87616428_87621353_87621488_87621949_87622014_87634844_87634962_87636406_87636487_87653115_87653250_87656905_87656983_87657920_87658019_87663002_87663145_87664742_87664860_87665753_87665834_87667017
H1_mix_00074356	chr6	+	4706	7	FSM	ENSG00000146281.6	ENST00000275072.5	4703	7	-3	0	-3	0	multi-exon	FALSE	canonical	3	45	junction_1	17.4300188053701	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATTGTCTTGCTTTTTTA	-24	True	NA	26	True	AATAAA	-16	NA	89146051	89165565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_89146610_89149264_89149414_89153042_89153186_89154747_89154903_89158324_89158461_89161782_89161891_89162108
H1_mix_00074357	chr6	+	4756	8	NNC	ENSG00000146281.6	novel	4703	7	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	34.2070526204698	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATTGTCTTGCTTTTTTA	-24	True	NA	26	True	AATAAA	-16	NA	89146051	89165565	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_89146610_89148524_89148575_89149264_89149414_89153042_89153186_89154747_89154903_89158324_89158461_89161782_89161891_89162108
H1_mix_00074359	chr6	+	2841	14	NIC	ENSG00000135299.17	novel	5368	16	NA	NA	3	-2	combination_of_known_splicesites	FALSE	canonical	3	24	junction_5	29.5464732724607	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCGTAATTCTCCAACT	11	True	NA	16	True	AATAAA	-12	NA	89433154	89631495	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_89433376_89566833_89567097_89595915_89596015_89603028_89603128_89606006_89606106_89616558_89616658_89617953_89618032_89621921_89622027_89623409_89623545_89623871_89624058_89624538_89624692_89627582_89627697_89629111_89629239_89630432
H1_mix_00074360	chr6	+	3124	17	NIC	ENSG00000135299.17	novel	2968	16	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_15	42.5715849334976	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTAATTCTCCAACTGTTGA	11	True	NA	21	True	AATAAA	-17	NA	89433154	89631500	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_89433376_89566833_89567097_89595915_89596015_89603028_89603128_89606006_89606106_89612271_89612371_89613791_89613891_89616558_89616658_89617953_89618032_89621921_89622027_89623409_89623545_89623871_89624058_89624538_89624692_89627582_89627697_89628246_89628342_89629111_89629224_89630432
H1_mix_00074362	chr6	+	5273	15	FSM	ENSG00000135299.17	ENST00000369408.9	5258	15	-15	0	3	0	multi-exon	FALSE	canonical	2	4	junction_9	36.5117397949912	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGTTTAGCTTACATTT	11	True	NA	34	True	ATTAAA	-18	NA	89433154	89633834	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_89433376_89566833_89567097_89595915_89596015_89603028_89603128_89606006_89606106_89612271_89612371_89613791_89613891_89616558_89616658_89617953_89618032_89623409_89623545_89623871_89624058_89624538_89624692_89627582_89627697_89629111_89629239_89630432
H1_mix_00074366	chr6	+	2489	13	FSM	ENSG00000135299.17	ENST00000520793.5	2489	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	47.418057976073	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTAATTCTCCAACTGTTGA	18	False	NA	21	True	AATAAA	-17	NA	89566975	89631500	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_89567097_89595915_89596015_89603028_89603128_89612271_89612371_89613791_89613891_89616558_89616658_89621921_89622027_89623409_89623545_89623871_89624058_89624538_89624692_89627582_89627697_89629111_89629224_89630432
H1_mix_00074371	chr6	+	6829	10	NNC	ENSG00000118412.13	novel	6719	10	NA	NA	-19	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	46.6835948132892	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTTGATTCGAATGTTT	-18	True	NA	16	True	AATAAA	-19	NA	89829874	89874433	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_89830107_89846561_89846645_89853165_89853235_89854816_89854918_89855469_89855545_89857083_89857200_89862125_89864372_89865952_89869083_89871288_89871389_89873756
H1_mix_00074372	chr6	+	6744	10	NNC	ENSG00000118412.13	novel	6719	10	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	41.5668433867163	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTTGATTCGAATGTTT	28	False	NA	16	True	AATAAA	-19	NA	89829920	89874433	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_89830068_89846561_89846645_89853165_89853235_89854816_89854918_89855469_89855545_89857083_89857200_89862125_89864372_89865952_89869083_89871288_89871389_89873756
H1_mix_00074380	chr6	+	3360	2	FSM	ENSG00000172469.17	ENST00000369293.6	3399	2	39	0	-5	0	multi-exon	FALSE	canonical	3	193	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTCTATCCTCTTGTAT	-7	True	NA	NA	False	AGTAAA	-14	NA	95577523	95589646	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_95577639_95586401
H1_mix_00074382	chr6	+	6891	2	FSM	ENSG00000172469.17	ENST00000682417.1	5119	2	-1735	-37	544	14	multi-exon	FALSE	canonical	3	205	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATGTCTTATTTGATTT	NA	False	NA	46	True	ATTAAA	-19	NA	95601749	95609484	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_95604904_95605747
H1_mix_00074384	chr6	+	4226	19	FSM	ENSG00000014123.10	ENST00000369278.5	4226	19	0	0	0	0	multi-exon	TRUE	canonical	3	75	junction_15	10.0623058987491	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATAGTACTTTGAAGCT	-23	True	NA	72	True	AATAAA	-19	NA	96521805	96555276	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_96521951_96523145_96523292_96524381_96524411_96525296_96525395_96526320_96526436_96528501_96528633_96534262_96534322_96536243_96536391_96537373_96537550_96538630_96538811_96540534_96540656_96542893_96543017_96548163_96548282_96549411_96549579_96549668_96549800_96551432_96551514_96551837_96551924_96552481_96552663_96553284
H1_mix_00074387	chr6	+	2599	2	FSM	ENSG00000228506.3	ENST00000418945.3	2600	2	-2	3	0	-3	multi-exon	FALSE	canonical	3	26	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTGATGGTATTTTATT	0	True	NA	NA	False	AATAAA	-19	NA	99424910	99432323	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_99425899_99430712
H1_mix_00074389	chr6	+	1748	4	FSM	ENSG00000279170.3	ENST00000452647.3	1873	4	-16	141	0	-141	multi-exon	FALSE	canonical	3	64	junction_2	4.02768199119819	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTACTCGGGAGGCTGAA	-21	True	NA	NA	False	AATACA	-39	NA	99521032	99533044	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_99521148_99526063_99526110_99531362_99531537_99531631
H1_mix_00074392	chr6	+	6050	6	NNC	ENSG00000187772.8	novel	2635	5	NA	NA	-306	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	175.114134209663	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGTTTTGGAGATTTT	3516	False	NA	13	True	AATAAA	-21	NA	104940559	105083332	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_104941013_104950460_104950510_104957004_104957261_104958098_104958287_105026297_105026483_105078413
H1_mix_00074393	chr6	+	5519	4	FSM	ENSG00000187772.8	ENST00000345080.5	5446	4	-76	3	-76	-3	multi-exon	FALSE	canonical	3	74	junction_1	163.905121606644	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGATGGGTTTTGGAGAT	-10	True	NA	10	True	AATAAA	-18	NA	104957030	105083329	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_104957261_104958098_104958287_105026297_105026483_105078413
H1_mix_00074394	chr6	+	5483	4	NNC	ENSG00000187772.8	novel	912	6	NA	NA	551	-3	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	187.018715640975	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGATGGGTTTTGGAGAT	-6	True	NA	10	True	AATAAA	-18	NA	104957657	105083329	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_104957852_104958098_104958287_105026297_105026483_105078413
H1_mix_00074395	chr6	+	5412	4	NNC	ENSG00000187772.8	novel	912	6	NA	NA	557	-4	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_1	176.371451456546	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGATGGGTTTTGGAGA	0	True	NA	9	True	AATAAA	-17	NA	104957663	105083328	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_104957788_104958098_104958287_105026297_105026483_105078413
H1_mix_00074409	chr6	+	7347	3	FSM	ENSG00000118689.15	ENST00000406360.2	7296	3	-51	0	-51	0	multi-exon	FALSE	canonical	3	63	junction_1	6	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAAGAAGTCTCTTTGTT	1045	False	NA	23	True	AATAAA	-23	NA	108560865	108684774	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_108561830_108663454_108664890_108679826
H1_mix_00074413	chr6	+	3215	12	NIC	ENSG00000183137.15	novel	2522	12	NA	NA	0	584	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	26.5719046306899	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCCTTAGCTCCTCAGCC	24	False	NA	NA	False	NA	NA	NA	109095525	109164494	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_109095576_109140420_109140676_109145218_109145382_109146757_109146938_109150117_109150240_109153832_109153950_109155229_109155308_109155790_109155878_109159024_109159103_109159268_109159463_109160571_109160717_109162748
H1_mix_00074419	chr6	+	2748	20	FSM	ENSG00000112367.12	ENST00000675714.1	2725	20	-23	0	0	0	multi-exon	TRUE	canonical	3	188	junction_7	21.9046030402067	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTAATGGTGAATTTCTG	-26	True	NA	NA	False	AATAAA	-20	NA	109691264	109791772	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375
H1_mix_00074423	chr6	+	1182	7	FSM	ENSG00000112367.12	ENST00000368941.2	1158	7	-24	0	5	0	multi-exon	FALSE	canonical	3	19	junction_6	82.2896307765039	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATGTAAGAATCATTCAA	-20	True	NA	4	True	AATAAA	-20	NA	109691270	109743480	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109743109
H1_mix_00074424	chr6	+	2519	20	FSM	ENSG00000112367.12	ENST00000675831.1	2501	20	-18	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	54.2018388542313	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTGTCTCATCTTCAAA	4	True	NA	-40	True	NA	NA	NA	109691294	109825312	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109796764_109796852_109825087
H1_mix_00074425	chr6	+	2828	22	FSM	ENSG00000112367.12	ENST00000674649.1	2811	22	-17	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	51.2522550800806	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCGTCTGAAGCCTTTCT	4	True	NA	0	True	ATTAAA	-6	NA	109691294	109825352	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_109691502_109715077_109715177_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109796764_109796852_109825087
H1_mix_00074426	chr6	+	3028	23	FSM	ENSG00000112367.12	ENST00000230124.8	3025	23	-25	22	5	0	multi-exon	FALSE	canonical	3	188	junction_7	21.2298032363596	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTAATAAAGATGACTAGAT	-20	True	NA	-16	True	NA	NA	NA	109691270	109825404	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109796764_109796852_109825087
H1_mix_00074429	chr6	+	240	1	FSM	ENSG00000213149.3	ENST00000417134.1	909	1	73	596	73	-596	mono-exon	FALSE	NA	NA	NA	NA	NA	1336	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCGATGCCAACGACCTG	NA	False	NA	NA	False	NA	NA	NA	110858311	110858551	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_110858300_110858600
H1_mix_00074431	chr6	+	3073	5	FSM	ENSG00000123505.19	ENST00000675380.1	3059	5	-14	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	338.764206344177	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAACTTTTCTGTTGCCCT	453	False	NA	23	True	AATAAA	-24	NA	110874769	110895708	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_110875216_110892298_110892444_110892734_110892828_110892909_110893066_110893475
H1_mix_00074433	chr6	+	4606	6	FSM	ENSG00000123505.19	ENST00000612642.4	4745	6	139	0	139	0	multi-exon	FALSE	canonical	3	727	junction_2	54.4191142890069	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTCTGTTGCCCTGTTT	NA	False	NA	27	True	AATAAA	-28	NA	110888424	110895712	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_110890357_110892160_110892204_110892298_110892444_110892734_110892828_110892909_110893066_110893475
H1_mix_00074435	chr6	+	1264	6	FSM	ENSG00000155115.7	ENST00000480191.1	800	6	-32	-432	-32	432	multi-exon	FALSE	canonical	3	16	junction_1	894.700262657836	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATACCAGCACTTTGGG	144	False	NA	NA	False	AGTAAA	-28	NA	110958895	110968322	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_110959043_110959171_110959253_110960413_110960478_110960571_110960617_110962391_110962506_110967509
H1_mix_00074437	chr6	+	3639	9	FSM	ENSG00000197498.13	ENST00000607388.1	3621	9	-18	0	-6	0	multi-exon	FALSE	canonical	3	9	junction_2	307.479267593768	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCATTTATCTGATTAG	-32	True	NA	21	True	AATAAA	-17	NA	110982031	111028263	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_110982130_110985005_110985139_110991746_110991787_110997182_110997265_110999710_110999788_111008037_111008138_111015753_111015857_111024182_111024328_111025402
H1_mix_00074439	chr6	+	2294	3	ISM	ENSG00000112394.18	ENST00000368851.10	10757	6	-56	52483	-56	-3	5prime_fragment	FALSE	canonical	3	108	junction_1	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATGTTTGTGAACTTG	NA	False	NA	14	True	GATAAA	-20	NA	111087446	111178711	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_111088096_111172694_111172840_111177211
H1_mix_00074440	chr6	+	10773	6	FSM	ENSG00000112394.18	ENST00000368851.10	10757	6	-16	0	-16	0	multi-exon	FALSE	canonical	3	60	junction_4	19.5489130132598	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAAGGCTTTGTGGTTATG	12	False	NA	8	True	AATAAA	-19	NA	111087486	111231194	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_111088096_111172694_111172840_111177211_111177666_111206591_111206736_111218813_111219043_111222002
H1_mix_00074443	chr6	+	3964	2	FSM	ENSG00000173214.7	ENST00000658925.2	3964	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAATCTCAGGTCTGTCTT	NA	False	NA	9	True	AATAAA	-17	NA	111274526	111278744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_111278159_111278412
H1_mix_00074447	chr6	+	581	3	FSM	ENSG00000231889.8	ENST00000691364.1	599	3	17	1	0	0	multi-exon	FALSE	canonical	3	43	junction_1	6.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCGTGTTACACTTGTC	24	False	NA	NA	False	ATTAAA	-16	NA	111483515	111503608	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_111483666_111484743_111484862_111503295
H1_mix_00074450	chr6	+	2700	6	Fusion	ENSG00000255389.1_ENSG00000231889.8	novel	886	4	NA	NA	2	0	multi-exon	FALSE	canonical	2	3	junction_5	20.626196934966	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCCCATGTTTTTTTTTT	1	True	NA	10	True	AATAAA	-22	NA	111483551	111602295	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr6_+_111483666_111484743_111484862_111574620_111574803_111576361_111576471_111597837_111598905_111601185
H1_mix_00074458	chr6	+	8149	3	NNC	ENSG00000228624.8	novel	786	6	NA	NA	-5893	-28683	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	404	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGGAGATAAGGGTGGGG	NA	False	NA	NA	False	AAAAAG	-10	NA	114419718	114427951	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_114427047_114427088_114427215_114427256
H1_mix_00074460	chr6	+	5610	3	NNC	ENSG00000228624.8	novel	786	6	NA	NA	-3137	-28424	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	561	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTCAGTTACTTCAGG	NA	False	NA	NA	False	NA	NA	NA	114422474	114428210	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_114427089_114427172_114427215_114427256
H1_mix_00074461	chr6	+	6921	12	FSM	ENSG00000178425.14	ENST00000319550.9	6919	12	-2	0	0	0	multi-exon	FALSE	canonical	3	391	junction_6	43.8360959231673	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATTTGTCTCTAGACAT	-2	True	NA	22	True	ATTAAA	-15	NA	116100850	116249497	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_116101024_116106243_116106336_116108363_116108436_116110849_116110957_116115690_116115771_116117860_116117946_116221053_116221229_116223033_116223132_116236965_116237085_116238186_116238349_116238954_116239124_116243908
H1_mix_00074463	chr6	+	10621	6	FSM	ENSG00000111817.19	ENST00000644252.3	10621	6	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_4	14.6068477092082	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGTCTATGGTGTTTTTG	-1	True	NA	8	True	AATAAA	-21	NA	116370946	116444861	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_116371122_116399197_116399667_116426573_116426828_116430953_116431194_116433342_116433551_116435586
H1_mix_00074465	chr6	+	3692	5	FSM	ENSG00000111817.19	ENST00000359564.3	3692	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	59.6343022093828	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTTATTTTCCTAAATAA	102	False	NA	-10	True	AATAGA	-12	NA	116371049	116438243	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_116371122_116399197_116399667_116426573_116426828_116430953_116431194_116435586
H1_mix_00074466	chr6	+	3930	6	NNC	ENSG00000111817.19	novel	10621	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	47.1270622890924	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTCTCTAGTATTCTTC	102	False	NA	24	True	AATAAA	-14	NA	116371049	116438277	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_116371122_116399197_116399663_116426573_116426828_116430953_116431194_116433342_116433551_116435586
H1_mix_00074471	chr6	+	1427	8	FSM	ENSG00000111832.13	ENST00000487832.6	1427	8	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	260.055724012829	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTAGCCTTCCTTTTAG	-28	True	NA	NA	False	GATAAA	-35	NA	116571488	116593588	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_116571656_116574057_116574172_116580294_116580361_116584726_116584858_116588841_116588986_116590271_116590405_116590887_116590951_116592979
H1_mix_00074472	chr6	+	5400	7	FSM	ENSG00000111832.13	ENST00000466444.7	5385	7	-15	0	0	0	multi-exon	FALSE	canonical	3	613	junction_4	46.7285304236668	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTTGCAAAGCTACCTCAT	-28	True	NA	NA	False	AATAAA	-19	NA	116571488	116597675	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_116571656_116580294_116580361_116584726_116584858_116588841_116588986_116590271_116590405_116590887_116590951_116592979
H1_mix_00074474	chr6	+	2174	15	FSM	ENSG00000196911.11	ENST00000356348.6	2150	15	-24	0	0	0	multi-exon	FALSE	canonical	1	8	junction_14	23.9310233285378	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAATGTTTTATGCTTTTT	-20	True	NA	2	True	AATAAA	-17	NA	116681186	116741866	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_116681339_116689319_116689454_116692054_116692157_116692292_116692393_116698703_116698799_116702018_116702151_116705071_116705161_116716218_116716319_116722125_116722290_116724296_116724376_116725750_116725877_116726494_116726623_116729562_116729742_116732135_116732369_116741505
H1_mix_00074475	chr6	+	2200	16	NNC	ENSG00000196911.11	novel	2150	15	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	31.1274084297995	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAATGTTTTATGCTTTT	13	True	NA	1	True	AATAAA	-16	NA	116681219	116741865	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_116681339_116681492_116681553_116689319_116689454_116692054_116692157_116692292_116692393_116698703_116698799_116702018_116702151_116705071_116705161_116716218_116716319_116722125_116722290_116724296_116724376_116725750_116725877_116726494_116726623_116729562_116729742_116732135_116732369_116741505
H1_mix_00074478	chr6	+	5005	5	FSM	ENSG00000153989.8	ENST00000368494.4	4796	5	3	-212	3	212	multi-exon	FALSE	canonical	3	328	junction_2	12.1860576069539	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTAATTTAAGTTGCTGT	4	True	NA	NA	False	NA	NA	NA	117675471	117710939	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_117676086_117693041_117693168_117694030_117694181_117703604_117703705_117706924
H1_mix_00074482	chr6	+	4478	7	FSM	ENSG00000196376.11	ENST00000621341.1	4481	7	3	0	3	0	multi-exon	FALSE	canonical	3	35	junction_5	6.89000886953146	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTTTTCTTTTGTGT	NA	False	NA	21	True	AATAAA	-27	NA	118154444	118317676	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_118154621_118235508_118235637_118266994_118267155_118275458_118275616_118277493_118277547_118285183_118285339_118314027
H1_mix_00074490	chr6	+	1879	6	NIC	ENSG00000135549.15	novel	464	5	NA	NA	-37	-7	combination_of_known_splicesites	FALSE	canonical	3	381	junction_1	36.0255464913442	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACTGACACAAGTCTCCT	NA	False	NA	12	True	AATAAA	-24	NA	122482041	122726365	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_122482267_122585920_122586008_122633282_122633368_122675077_122675145_122717786_122717964_122725127
H1_mix_00074491	chr6	+	1997	7	NNC	ENSG00000135549.15	novel	464	5	NA	NA	-32	-4	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_2	165.959248679374	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGACACAAGTCTCCTTCA	NA	False	NA	15	True	AATAAA	-27	NA	122482046	122726368	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_122482267_122585920_122586008_122603503_122603624_122633282_122633368_122675077_122675145_122717786_122717964_122725127
H1_mix_00074492	chr6	+	1706	5	FSM	ENSG00000135549.15	ENST00000368452.7	1706	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	186.336221653226	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAGTCTCCTTCATTTTA	3	True	NA	20	True	AATAAA	-32	NA	122610404	122726373	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_122610536_122633282_122633368_122675077_122675145_122717786_122717964_122725127
H1_mix_00074493	chr6	+	785	4	FSM	ENSG00000164434.12	ENST00000368444.8	785	4	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_3	19.5106808355492	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTGTTGTTTCTAATA	-3	True	NA	6	True	AATAAA	-17	NA	122779715	122784074	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_122779868_122780290_122780464_122781092_122781195_122783716
H1_mix_00074502	chr6	+	2247	7	FSM	ENSG00000111907.21	ENST00000534000.6	2239	7	-8	0	0	0	multi-exon	FALSE	canonical	3	84	junction_5	34.5964834436488	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATGGAGCATGACAATCT	14	True	NA	NA	False	AGTAAA	-26	NA	125153764	125264407	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_125153971_125220077_125220194_125229117_125229267_125248281_125248384_125253716_125253756_125257097_125257159_125262833
H1_mix_00074503	chr6	+	2147	5	FSM	ENSG00000111907.21	ENST00000368388.6	2147	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	50.2810849127184	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATGGAGCATGACAATCT	14	True	NA	NA	False	AGTAAA	-26	NA	125153764	125264407	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_125153971_125220077_125220194_125229117_125229267_125248281_125248384_125262833
H1_mix_00074506	chr6	+	2626	5	FSM	ENSG00000135547.9	ENST00000368364.4	2626	5	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	13.4420050587701	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTATGTGGATGAGTTG	-8	True	NA	6	True	ATTAAA	-19	NA	125749631	125761269	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_125749860_125751800_125751880_125752006_125752091_125754464_125754547_125759116
H1_mix_00074507	chr6	+	6272	16	FSM	ENSG00000111912.20	ENST00000392477.7	6264	16	-20	12	0	-12	multi-exon	FALSE	canonical	3	16	junction_1	4.94592986426438	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTATAAATAACCCAGTCT	-24	True	NA	NA	False	ATTAAA	-9	NA	125790939	125932022	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_125791068_125815290_125815405_125855019_125855241_125874888_125874969_125878262_125878371_125881089_125881204_125882425_125882552_125885158_125885344_125888938_125889982_125890641_125890811_125915332_125915481_125920942_125921069_125922681_125922835_125927662_125927759_125928173_125928248_125928635
H1_mix_00074508	chr6	+	3328	5	FSM	ENSG00000111911.7	ENST00000229633.7	3325	5	-3	0	-3	0	multi-exon	FALSE	canonical	3	38	junction_2	3.77491721763537	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTGTCTGGACTTTT	-5	True	NA	19	True	AATAAA	-21	NA	125956766	125980244	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_125957179_125966886_125967005_125972258_125972329_125974846_125974974_125977643
H1_mix_00074510	chr6	+	1857	13	FSM	ENSG00000066651.20	ENST00000334379.11	1843	13	-14	0	0	0	multi-exon	FALSE	canonical	3	272	junction_1	34.2031309483016	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCATATCTAGTTGTC	-10	True	NA	19	True	AATAAA	-22	NA	125986525	126039276	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_125986623_125993756_125993823_125995966_125996041_125998052_125998135_125998222_125998316_125998549_125998685_125999456_125999614_126008391_126008473_126011252_126011418_126012770_126012853_126012969_126013102_126021159_126021281_126038704
H1_mix_00074513	chr6	+	809	3	FSM	ENSG00000203760.9	ENST00000368328.5	809	3	0	0	0	0	multi-exon	FALSE	canonical	3	1449	junction_2	46.5	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAATGCAGTCAAATCTAG	-44	True	NA	86	True	AAGAAA	-2	NA	126340114	126348875	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_126340400_126346204_126346319_126348465
H1_mix_00074514	chr6	+	528	3	FSM	ENSG00000203760.9	ENST00000368325.5	528	3	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	656	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTTTGTATTTTTT	15	True	NA	15	True	ATTAAA	-17	NA	126340173	126348608	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_126340445_126346204_126346319_126348465
H1_mix_00074517	chr6	+	2143	3	FSM	ENSG00000118518.17	ENST00000368314.6	2119	3	-24	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	2	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAGCCTGTGAGACTTAA	-12	True	NA	NA	False	AATAAA	-18	NA	127266839	127288562	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_127266926_127280230_127280341_127286615
H1_mix_00074518	chr6	+	2276	4	FSM	ENSG00000118518.17	ENST00000356799.6	2267	4	-9	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	20.5318181259127	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGTGAGACTTAAAATTC	-12	True	NA	NA	False	AATAAA	-23	NA	127266839	127288567	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_127266926_127280230_127280341_127286049_127286178_127286615
H1_mix_00074519	chr6	+	2764	5	FSM	ENSG00000118518.17	ENST00000608991.5	2169	5	-595	0	-438	0	multi-exon	FALSE	canonical	3	9	junction_2	43.6942501938184	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGTCTCTTGTTTGAG	NA	False	NA	29	True	AATAAA	-20	NA	127266287	127288362	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_127266926_127280230_127280341_127285207_127285349_127286049_127286178_127286615
H1_mix_00074520	chr6	+	2070	3	FSM	ENSG00000118518.17	ENST00000610153.1	2070	3	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	10.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGTCTCTTGTTTGAG	-2	True	NA	29	True	AATAAA	-20	NA	127266882	127288362	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_127267096_127280230_127280341_127286615
H1_mix_00074527	chr6	+	4236	23	FSM	ENSG00000198945.8	ENST00000368136.3	4245	23	0	9	0	0	multi-exon	FALSE	canonical	1	2	junction_1	14.9766346946455	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTTTACATATGTATGA	1944	False	NA	96	True	AATAAA	-15	NA	130020556	130141440	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_130020669_130022226_130022306_130042684_130042802_130049281_130049394_130049755_130049831_130051248_130051409_130052858_130052992_130055170_130055256_130057405_130057498_130060035_130060141_130066352_130066489_130068329_130068422_130070975_130071128_130078557_130078635_130083619_130083706_130086139_130086251_130092744_130092860_130094264_130094368_130104425_130104576_130120878_130120959_130133451_130133622_130133842_130133906_130139609
H1_mix_00074528	chr6	+	4086	3	FSM	ENSG00000164484.12	ENST00000296978.4	3233	3	-496	-357	-496	357	multi-exon	FALSE	canonical	3	75	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGTTTTTCACACTTTC	-13	True	NA	7	True	AATAAA	-20	NA	130365520	130443424	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_130366525_130385172_130385237_130440406
H1_mix_00074529	chr6	+	3558	2	FSM	ENSG00000164484.12	ENST00000617887.4	2899	2	-356	-303	-92	297	multi-exon	FALSE	canonical	3	57	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGTTCTTCACACCTT	199	False	NA	13	True	AATAAA	-16	NA	130365924	130443364	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_130366525_130440406
H1_mix_00074532	chr6	+	3296	2	FSM	ENSG00000118507.18	ENST00000342266.4	2461	2	-835	0	-835	0	multi-exon	FALSE	canonical	3	85	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTCCTCATTTCTT	NA	False	NA	5	True	AATAAA	-17	NA	131249323	131283532	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_131250617_131281529
H1_mix_00074543	chr6	+	1683	6	FSM	ENSG00000112306.8	ENST00000484616.2	639	6	0	-1044	0	1044	multi-exon	FALSE	canonical	3	97	junction_3	3440.23388739777	151	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGTGTTAACATTGAAAT	0	True	NA	NA	False	NA	NA	NA	132814568	132818608	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_132814614_132814731_132814783_132814971_132815225_132816460_132816564_132816959_132817062_132817479
H1_mix_00074546	chr6	+	4199	7	FSM	ENSG00000028839.10	ENST00000237264.9	4199	7	0	0	0	0	multi-exon	FALSE	canonical	3	578	junction_2	49.724798195222	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTTTCTATGCATTTT	-1	True	NA	9	True	AATAAA	-22	NA	133953223	133990432	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_133953426_133980081_133980261_133982567_133982651_133982816_133982881_133984375_133984480_133984576_133984672_133986960
H1_mix_00074554	chr6	+	4662	9	FSM	ENSG00000118503.16	ENST00000612899.5	4665	9	0	3	0	-3	multi-exon	FALSE	canonical	2	8	junction_1	4.41411089575239	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGATTGTGATGTTTTCAA	-1	True	NA	11	True	AATAAA	-11	NA	137867258	137883309	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_137867543_137871212_137871523_137874844_137875036_137875687_137875836_137875995_137876167_137877075_137877257_137878431_137879352_137880070_137880253_137881034
H1_mix_00074558	chr6	+	864	4	FSM	ENSG00000051620.11	ENST00000367697.7	844	4	-20	0	4	0	multi-exon	FALSE	canonical	3	96	junction_3	642.87963276357	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGAGAGTACTACTATTA	-59	True	NA	35	True	AGTAAA	-20	NA	138404226	138413173	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_138404598_138405144_138405281_138405970_138406034_138412879
H1_mix_00074559	chr6	+	765	4	NIC	ENSG00000225177.6	novel	917	3	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	6.53197264742181	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGCAGTCACTTGAGTC	67	False	NA	26	True	AATAAA	-19	NA	138692552	138697288	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_138692618_138694392_138694548_138696596_138696756_138696902
H1_mix_00074560	chr6	+	2178	2	FSM	ENSG00000225177.6	ENST00000664532.1	2178	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAAGCCCTCTTCCATCT	2463	False	NA	11	True	AATAAA	-4	NA	138694948	138697273	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_138696756_138696902
H1_mix_00074563	chr6	+	5653	4	FSM	ENSG00000112406.5	ENST00000367658.3	5646	4	-7	0	-7	0	multi-exon	FALSE	canonical	3	14	junction_1	11.4406682011537	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTACTCTGTCTTTAGT	-3	True	NA	22	True	AATAAA	-15	NA	139135072	139180802	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_139135668_139166283_139167325_139174384_139174540_139176940
H1_mix_00074564	chr6	+	1688	2	Intergenic	novelGene_1321	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	79	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGGTGGTCTCTTCAC	NA	False	NA	NA	False	AATAAA	-24	NA	142017100	142021748	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_142018356_142021315
H1_mix_00074571	chr6	+	565	2	FSM	ENSG00000146416.19	ENST00000367596.5	559	2	-12	6	0	-6	multi-exon	FALSE	canonical	3	83	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCCCCCATTGTCAAT	-8	True	NA	27	True	AATAAA	-21	NA	143060888	143061600	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_143061067_143061213
H1_mix_00074572	chr6	+	3826	4	FSM	ENSG00000146416.19	ENST00000494282.6	3393	4	-433	0	-28	0	multi-exon	FALSE	canonical	3	39	junction_3	113.743375875501	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATTCAGTGTCCTGGCA	-18	True	NA	NA	False	AATAAA	-26	NA	143060467	143190597	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_143061067_143136834_143136991_143165081_143165184_143187628
H1_mix_00074573	chr6	+	2136	6	FSM	ENSG00000146416.19	ENST00000357847.9	2136	6	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_3	39.9469648408987	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCGTCTCTCTGTCTCTC	-8	True	NA	NA	False	ATTAAA	-19	NA	143060888	143341058	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_143061067_143136834_143136991_143165081_143165184_143284109_143284226_143333281_143333446_143339638
H1_mix_00074579	chr6	+	4385	12	FSM	ENSG00000112419.15	ENST00000367582.7	4367	12	-18	0	0	0	multi-exon	FALSE	canonical	1	71	junction_10	67.509534068031	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTATTTTGCAGAATATG	-20	True	NA	NA	False	ATTAAA	-15	NA	143677964	143826177	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_143678210_143712015_143712184_143748984_143749066_143753753_143753913_143765260_143765799_143772257_143772458_143774058_143774216_143777327_143777384_143783218_143783281_143788772_143788911_143807056_143807134_143823673
H1_mix_00074595	chr6	+	1345	6	NIC	ENSG00000111962.8	novel	4496	8	NA	NA	23	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_5	92.4264031540771	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTAGTCCCTTCCTTCTT	7	True	NA	NA	False	AATAAA	-19	NA	148747052	149005588	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_148747678_148886985_148887030_148941278_148941435_148953871_148953952_148964409_148964564_149005302
H1_mix_00074596	chr6	+	4679	8	NIC	ENSG00000055208.19	novel	4240	7	NA	NA	15	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	40.949446184987	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTGTGACTTGTTTTCA	-1	True	NA	18	True	ATTAAA	-20	NA	149317548	149411611	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_149318016_149342684_149342834_149369908_149370100_149378017_149379519_149397603_149397765_149397968_149398063_149399103_149399185_149409576
H1_mix_00074597	chr6	+	4363	7	FSM	ENSG00000055208.19	ENST00000637181.2	4363	7	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	8.95203266799719	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGATTTTGTGACTTGTT	28	True	NA	14	True	ATTAAA	-16	NA	149317711	149411607	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_149318016_149369908_149370100_149378017_149379519_149397603_149397765_149397968_149398063_149399103_149399185_149409576
H1_mix_00074605	chr6	+	1732	8	FSM	ENSG00000120265.19	ENST00000649295.1	1733	8	0	1	0	0	multi-exon	FALSE	canonical	3	376	junction_7	469.535767258144	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTTGTTTTTGAATAT	NA	False	NA	NA	False	AATAAA	-18	NA	149749694	149811419	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_149749957_149771161_149771267_149773137_149773170_149789953_149790059_149793548_149793670_149796414_149796501_149802199_149802417_149810615
H1_mix_00074608	chr6	+	463	1	FSM	ENSG00000213089.4	ENST00000398028.3	722	1	83	176	83	-176	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTTTGGCGGCATGAAC	114	False	NA	NA	False	NA	NA	NA	150827745	150828208	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_150827700_150828200
H1_mix_00074611	chr6	+	3474	28	FSM	ENSG00000120254.16	ENST00000367321.8	3451	28	-23	0	0	0	multi-exon	FALSE	canonical	3	164	junction_6	78.3192439828943	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCAAGTTTTCAGTGCCA	-39	True	NA	20	True	AATAAA	-20	NA	150865678	151101887	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_150866050_150876089_150876175_150877633_150877685_150877772_150877827_150882761_150882887_150885633_150885735_150887844_150887982_150905649_150905762_150918576_150918669_150922204_150922303_150926121_150926296_150936803_150936941_150938698_150938746_150944485_150944594_150945466_150945542_150949030_150949134_150955994_150956072_150960274_150960416_150964968_150965038_150971946_150972059_151009818_151009959_151013778_151013821_151014879_151014981_151015515_151015694_151034492_151034601_151036964_151037118_151092466_151092588_151101525
H1_mix_00074612	chr6	+	1049	8	FSM	ENSG00000120254.16	ENST00000367307.8	1049	8	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_6	120.497099634838	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCTGTCATGACTTTTT	-2	True	NA	34	True	ATTAAA	-40	NA	150865715	150899021	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_150866050_150876089_150876175_150877633_150877685_150877772_150877827_150882761_150882887_150885633_150885735_150887844_150887982_150898859
H1_mix_00074613	chr6	+	1025	8	NIC	ENSG00000120254.16	novel	1049	8	NA	NA	6	-21	combination_of_known_junctions	FALSE	canonical	3	178	junction_7	111.286906283732	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCTGCATTTTTCCTTT	4	True	NA	13	True	ATTAAA	-19	NA	150865721	150899000	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_150866050_150876089_150876175_150877633_150877685_150877772_150877827_150882761_150882887_150885633_150885735_150887841_150887982_150898859
H1_mix_00074617	chr6	+	373	2	FSM	ENSG00000120254.16	ENST00000421497.1	373	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTGAGTTGCCAGTCTT	NA	False	NA	NA	False	ATTAAA	-12	NA	150905669	150912948	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_150905762_150912667
H1_mix_00074624	chr6	+	2397	5	FSM	ENSG00000146476.11	ENST00000367294.4	2397	5	0	0	0	0	multi-exon	FALSE	canonical	3	913	junction_4	58.0624663616695	235	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTGGTTTTATTTTCT	-30	True	NA	17	True	AATAAA	-18	NA	151452465	151470101	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_151452587_151454547_151454654_151458327_151458573_151464452_151464619_151468342
H1_mix_00074627	chr6	+	2974	2	NNC	ENSG00000120279.7	novel	3030	2	NA	NA	-14607	0	intron_retention	FALSE	canonical	3	67	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTATTCAAAATTCATTT	NA	False	NA	18	True	AATAAA	-17	NA	152683289	152724569	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_152683436_152721741
H1_mix_00074637	chr6	+	8731	19	FSM	ENSG00000049618.24	ENST00000350026.10	7962	19	958	-1727	-86	90	multi-exon	FALSE	canonical	3	93	junction_10	24.1549141282516	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAAGAGAATGATATAGA	626	False	NA	NA	False	NA	NA	NA	156778887	157210869	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_156779472_156829226_156829422_156901375_156901526_156935465_156935577_157084661_157084906_157110471_157110562_157133027_157133208_157148623_157148952_157167039_157167186_157174007_157174118_157180968_157181179_157184230_157184436_157189641_157189781_157190037_157190211_157196164_157196316_157198810_157198908_157200704_157201489_157203865_157203997_157206166
H1_mix_00074642	chr6	+	7313	9	FSM	ENSG00000175048.17	ENST00000359775.10	7334	9	0	21	0	-21	multi-exon	FALSE	canonical	3	16	junction_8	8.36286434183886	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTAATGGCATAAAATGTAA	3	True	NA	NA	False	AATAAA	-5	NA	157381189	157678136	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_157382267_157542584_157542746_157592987_157593147_157628348_157628487_157632833_157632883_157645736_157645840_157647258_157647369_157653524_157653628_157672723
H1_mix_00074644	chr6	+	3434	18	FSM	ENSG00000130340.17	ENST00000681183.1	3434	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	70.0797370869284	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCGTAATGGGAGTGATAT	-10	True	NA	NA	False	AATAAA	-12	NA	157823220	157942738	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_157823447_157867546_157867634_157873101_157873177_157875050_157875177_157896826_157896999_157901897_157902046_157906127_157906213_157909664_157909791_157909907_157910026_157921530_157921662_157927110_157927215_157928598_157928703_157932194_157932273_157935963_157936041_157937433_157937524_157938632_157938748_157940882_157940975_157941258
H1_mix_00074645	chr6	+	3676	18	FSM	ENSG00000130340.17	ENST00000392185.8	4216	18	0	540	0	23	multi-exon	FALSE	canonical	3	231	junction_6	21.4418018144909	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGACTTTGTGTGTGA	15	True	NA	37	True	AGTAAA	-26	NA	157823245	157944537	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_157823447_157867546_157867634_157873101_157873177_157875050_157875177_157896826_157896999_157901897_157902046_157906127_157906213_157909664_157909791_157909907_157910026_157921530_157921662_157927110_157927215_157928598_157928703_157932194_157932273_157935963_157936041_157937433_157937524_157938632_157938748_157940882_157940975_157942790
H1_mix_00074654	chr6	+	11318	14	FSM	ENSG00000130338.13	ENST00000367097.8	11318	14	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_13	20.8910954672675	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGTGCAGAATTCTTGA	0	True	NA	NA	False	AATAAA	-19	NA	158312464	158511828	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_158314269_158413064_158413194_158429735_158429898_158448995_158449177_158452133_158452269_158461562_158461730_158479750_158479976_158481054_158481290_158489587_158489733_158493572_158493718_158494752_158494847_158498668_158498813_158501677_158504179_158506577
H1_mix_00074660	chr6	+	5124	17	FSM	ENSG00000146433.10	ENST00000684151.1	5103	17	-22	1	-22	0	multi-exon	TRUE	canonical	3	63	junction_1	12.9311578657907	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTATGTGTCTTGATTT	-26	True	NA	17	True	AATAAA	-13	NA	158560068	158635428	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_158560233_158573419_158573524_158580939_158580996_158583953_158584045_158585303_158585426_158589671_158589783_158605266_158605348_158607243_158607344_158608332_158608464_158608658_158608751_158623549_158623608_158625103_158625207_158625702_158625755_158628407_158628491_158629729_158629820_158631322_158631390_158631809
H1_mix_00074665	chr6	+	1644	6	FSM	ENSG00000146457.16	ENST00000337387.4	1622	6	-22	0	0	0	multi-exon	FALSE	canonical	3	421	junction_1	51.6503630190534	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATAGTTGGTTTTTTTTT	-6	True	NA	12	True	ATTAAA	-14	NA	159727565	159749415	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_159727704_159736257_159736296_159738989_159739046_159742087_159742147_159743664_159743793_159748190
H1_mix_00074666	chr6	+	1430	7	FSM	ENSG00000146457.16	ENST00000631126.2	1430	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_6	179.882755025476	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTTTTTTTTTTTTTTT	-6	True	NA	18	True	ATTAAA	-20	NA	159727565	159749421	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_159727704_159736257_159736296_159738989_159739046_159742087_159742147_159743664_159743793_159748190_159748370_159748589
H1_mix_00074667	chr6	+	1520	9	FSM	ENSG00000120437.9	ENST00000367048.5	1520	9	0	0	0	0	multi-exon	FALSE	canonical	3	1733	junction_5	177.607669809049	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGTAATTTAATAAGATCA	13	True	NA	-23	True	NA	NA	NA	159762044	159779112	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_159762143_159762918_159763054_159767004_159767187_159768510_159768629_159775169_159775314_159776149_159776273_159777301_159777457_159778169_159778281_159778658
H1_mix_00074669	chr6	+	1641	4	FSM	ENSG00000120437.9	ENST00000472052.1	1641	4	0	0	0	0	multi-exon	FALSE	canonical	3	2052	junction_1	120.461150952865	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATTAAGGGCTCCAGAG	NA	False	NA	14	True	AATAAA	-15	NA	159775285	159779046	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_159776273_159777301_159777457_159778169_159778281_159778658
H1_mix_00074671	chr6	+	977	4	NIC	ENSG00000112110.10	novel	758	4	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	223	junction_1	315.827308649662	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGGTTATATGACATT	11	False	NA	20	True	AATAAA	-20	NA	159789880	159798429	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_159790061_159790939_159791127_159797286_159797519_159798051
H1_mix_00074672	chr6	+	970	4	FSM	ENSG00000112110.10	ENST00000367034.5	970	4	0	0	0	0	multi-exon	FALSE	canonical	3	633	junction_1	122.901044204948	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGGTTATATGACATT	-18	True	NA	20	True	AATAAA	-20	NA	159790466	159798429	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_159790640_159790939_159791127_159797286_159797519_159798051
H1_mix_00074677	chr6	+	1154	3	NNC	ENSG00000220913.1	novel	489	3	NA	NA	-22471	-7305	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_2	6	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGATCTTCCAATCAGTT	11	False	NA	17	True	AGTAAA	-18	NA	160883298	160906333	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_160883784_160898548_160898654_160905769
H1_mix_00074678	chr6	+	3865	5	NNC	ENSG00000220913.1	novel	489	3	NA	NA	-22469	2785	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_3	14.9059551857638	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGTTTGTAAGAAAATCATAA	13	False	NA	NA	False	AATAAA	-21	NA	160883300	160916423	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_160883784_160898548_160898654_160905769_160905922_160912064_160912247_160913480
H1_mix_00074679	chr6	+	5525	2	Antisense	novelGene_ENSG00000224371.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	316	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCACTTCTCCCTTGTCCCC	17	False	NA	27	True	TATAAA	-15	NA	160883304	160891562	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr6_+_160883784_160886516
H1_mix_00074683	chr6	+	5546	28	FSM	ENSG00000085511.20	ENST00000544041.5	5444	28	-30	-72	0	0	multi-exon	FALSE	canonical	2	9	junction_22	45.138773978961	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGTTATATTGTCTTTT	37	False	NA	25	True	AATAAA	-18	NA	160991813	161117380	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_160992084_161034258_161034450_161048615_161049980_161070607_161070851_161073465_161073613_161080880_161081039_161084500_161084618_161086378_161086479_161086583_161086668_161087687_161087955_161089321_161089472_161091378_161091541_161092009_161092144_161092977_161093057_161093772_161093852_161097079_161097177_161098277_161098428_161101891_161101993_161102698_161102780_161106513_161106706_161107898_161107970_161108742_161108860_161108950_161109042_161109754_161109915_161111835_161111959_161112667_161112775_161115122_161115303_161116849
H1_mix_00074686	chr6	+	2290	10	FSM	ENSG00000085511.20	ENST00000536852.1	2526	10	236	0	236	0	multi-exon	FALSE	canonical	3	142	junction_5	15.8168530215771	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATATTGTCTTTTAATG	NA	False	NA	29	True	AATAAA	-22	NA	161101268	161117384	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_161101993_161102698_161102780_161106513_161106706_161107898_161107970_161108742_161108860_161109754_161109915_161111835_161111959_161112667_161112775_161115122_161115303_161116849
H1_mix_00074688	chr6	+	5685	7	FSM	ENSG00000112531.17	ENST00000453779.6	5685	7	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_6	210.673523095175	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTTTGGCCCAGAGTTT	-7	True	NA	NA	False	AATAAA	-21	NA	163414642	163570145	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_163415336_163455278_163455422_163478779_163478897_163534981_163535126_163561981_163562070_163563419_163563720_163565945
H1_mix_00074689	chr6	+	7911	6	FSM	ENSG00000112531.17	ENST00000392127.6	7911	6	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_5	51.9284122614971	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTTTGGCCCAGAGTTT	-7	True	NA	NA	False	AATAAA	-21	NA	163414642	163570145	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_163415336_163455278_163455422_163478779_163478897_163534981_163535126_163561981_163562070_163563419
H1_mix_00074690	chr6	+	9384	8	FSM	ENSG00000112531.17	ENST00000361752.8	9384	8	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_5	54.5407542810972	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACTCTAGATTTCTAGAT	3	True	NA	NA	False	ATTAAA	-20	NA	163414717	163578592	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_163415336_163455278_163455422_163478779_163478897_163534981_163535126_163561981_163562070_163563419_163563720_163566720_163566796_163570693
H1_mix_00074696	chr6	+	1495	12	FSM	ENSG00000213066.13	ENST00000349556.4	1484	12	-11	0	0	0	multi-exon	FALSE	canonical	3	180	junction_6	71.5203259555868	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTGTGTGTGTGGCTGC	17	True	NA	26	True	AATAAA	-18	NA	166999396	167040317	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_166999515_167000059_167000114_167003192_167003248_167003722_167003812_167004263_167004402_167010812_167010894_167022408_167022636_167024781_167024895_167026546_167026616_167032602_167032643_167033874_167033972_167039903
H1_mix_00074697	chr6	+	13950	13	FSM	ENSG00000213066.13	ENST00000366847.9	13956	13	0	6	0	-6	multi-exon	FALSE	canonical	3	209	junction_7	76.0333899605225	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTCATGGCTGTCTGCG	17	True	NA	7	True	AATAAA	-13	NA	166999396	167052712	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_166999515_167000059_167000114_167003192_167003248_167003722_167003812_167004263_167004402_167010812_167010894_167013507_167013568_167022408_167022636_167024781_167024895_167026546_167026616_167032602_167032643_167033874_167033972_167039903
H1_mix_00074704	chr6	+	548	4	FSM	ENSG00000280707.3	ENST00000691081.1	629	4	74	7	0	-1	multi-exon	FALSE	canonical	3	322	junction_3	231.445217900239	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGAGTTTGTTCTTTTTG	6	True	NA	20	True	AATAAA	-15	NA	167228299	167237510	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_167228398_167231859_167231958_167232478_167232561_167237240
H1_mix_00074705	chr6	+	466	3	FSM	ENSG00000280707.3	ENST00000626424.2	573	3	100	7	0	-1	multi-exon	FALSE	canonical	3	195	junction_2	346.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGAGTTTGTTCTTTTTG	6	True	NA	20	True	AATAAA	-15	NA	167228299	167237510	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_167228398_167231859_167231958_167237240
H1_mix_00074706	chr6	+	6327	4	Fusion	ENSG00000228648.1_ENSG00000280707.3	novel	629	4	NA	NA	0	7235	multi-exon	FALSE	canonical	3	41	junction_3	378.685738956313	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTCTCAGCTATTT	6	True	NA	NA	False	ATTAAA	-16	NA	167228299	167253151	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr6_+_167228398_167231859_167231958_167245786_167245834_167247067
H1_mix_00074707	chr6	+	648	5	NNC	ENSG00000280707.3	novel	629	4	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	3	98	junction_1	218.660124394001	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGAGTTTGTTCTTTTT	8	True	NA	19	True	AATAAA	-14	NA	167228301	167237509	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_167228398_167231204_167231308_167231859_167231958_167232478_167232561_167237240
H1_mix_00074708	chr6	+	6407	5	Fusion	ENSG00000228648.1_ENSG00000280707.3	novel	629	4	NA	NA	2	7235	multi-exon	FALSE	canonical	3	27	junction_3	374.303603375655	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTCTCAGCTATTT	8	True	NA	NA	False	ATTAAA	-16	NA	167228301	167253151	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr6_+_167228398_167231859_167231958_167232478_167232561_167245786_167245834_167247067
H1_mix_00074713	chr6	+	963	6	FSM	ENSG00000130396.21	ENST00000400825.8	963	6	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_3	57.4268230011029	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTATGCAGATAGTTTAA	21	True	NA	NA	False	NA	NA	NA	167826921	167880372	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_167827238_167864550_167864747_167870382_167870499_167872216_167872378_167875334_167875496_167880359
H1_mix_00074715	chr6	+	7721	32	NIC	ENSG00000130396.21	novel	7806	34	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	113	junction_28	39.6916313387982	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGTCAGGCAGTGGT	26	True	NA	29	True	ATTAAA	-17	NA	167826926	167972023	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_167827238_167864550_167864747_167870382_167870499_167872213_167872378_167875334_167875496_167880359_167880518_167889214_167889327_167890861_167891030_167896877_167896973_167898204_167898468_167902316_167902387_167907170_167907290_167911100_167911163_167911283_167911490_167914167_167914314_167914643_167914739_167915167_167915434_167917088_167917233_167918734_167918934_167922855_167922960_167925004_167925092_167943128_167943195_167943401_167943476_167943940_167944060_167946706_167946902_167947852_167947945_167948292_167948479_167951185_167952188_167962438_167962568_167965756_167966046_167969113_167969199_167969781
H1_mix_00074716	chr6	+	5778	33	FSM	ENSG00000130396.21	ENST00000351017.9	5778	33	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_14	62.9838458951976	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCAAGAAATTTTATTTTA	23	False	NA	NA	False	NA	NA	NA	167826960	167970090	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_167827238_167864550_167864747_167870385_167870499_167872213_167872378_167875334_167875496_167880359_167880518_167889214_167889327_167890861_167891030_167896877_167896973_167898204_167898468_167902316_167902387_167907170_167907290_167911100_167911163_167911283_167911490_167913402_167913424_167914167_167914314_167914643_167914739_167915167_167915434_167917088_167917233_167918734_167918934_167922855_167922960_167925004_167925092_167943128_167943195_167943401_167943476_167943940_167944060_167946706_167946902_167947852_167947945_167948292_167948479_167951185_167952188_167962432_167962568_167965756_167966046_167969113_167969199_167969781
H1_mix_00074721	chr6	+	728	4	FSM	ENSG00000130396.21	ENST00000497596.2	728	4	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_3	25.74662868977	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGTACCAGTCTTAATAC	8207	False	NA	NA	False	AATAAA	-17	NA	167915400	167923207	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_167915434_167917088_167917233_167918734_167918934_167922855
H1_mix_00074722	chr6	+	4686	13	FSM	ENSG00000130396.21	ENST00000485634.7	4686	13	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_11	71.8124002755327	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGCTATTGTTTTGAA	NA	False	NA	25	True	AATAAA	-19	NA	167922953	167971912	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_167922960_167925004_167925092_167943128_167943195_167943401_167943476_167943940_167944060_167946706_167946902_167947852_167947945_167948292_167948479_167951185_167952188_167962438_167962568_167965756_167966271_167969113_167969199_167969781
H1_mix_00074728	chr6	+	3581	18	NIC	ENSG00000130023.16	novel	2160	18	NA	NA	-3	0	intron_retention	FALSE	canonical	3	19	junction_1	16.5491822313355	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTAAGTCAGGATGCTTT	-5	True	NA	13	True	AGTAAA	-16	NA	169751634	169781516	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_169753182_169753863_169754033_169755282_169755423_169756337_169756440_169756718_169756809_169758967_169759066_169759837_169759975_169760641_169760757_169762428_169762532_169766637_169766668_169768102_169768172_169769539_169769714_169773318_169773403_169775269_169775347_169775939_169776066_169776454_169776674_169779181_169779296_169781329
H1_mix_00074731	chr6	+	2043	8	FSM	ENSG00000130023.16	ENST00000366771.5	2206	8	163	0	163	0	multi-exon	FALSE	canonical	3	54	junction_3	13.5586405916625	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGAGTTGAGGGTCTGCT	NA	False	NA	81	True	ATTAAA	-14	NA	169767177	169781584	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_169768172_169769539_169769714_169773318_169773403_169775269_169775347_169775939_169776066_169776454_169776674_169779181_169779296_169781329
H1_mix_00074736	chr6	+	1872	8	FSM	ENSG00000112592.15	ENST00000392092.7	1857	8	-15	0	-15	0	multi-exon	FALSE	canonical	3	245	junction_1	33.1767068521127	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTTGTTATACCTTGTA	-12	True	NA	20	True	AATAAA	-21	NA	170554353	170572859	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_170554464_170556881_170557084_170561790_170562234_170564544_170564633_170566917_170567010_170569611_170569780_170571409_170571505_170572185
H1_mix_00074737	chr6	+	460	1	FSM	ENSG00000219814.2	ENST00000408017.2	460	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCNNNNNNNNNNNNNNNNNN	NA	False	NA	NA	False	NA	NA	NA	170745517	170745977	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_170745500_170746000
H1_mix_00074738	chr6	-	4456	28	FSM	ENSG00000112685.14	ENST00000230449.9	4456	28	0	0	0	0	multi-exon	FALSE	canonical	2	371	junction_17	59.4526474090988	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGTTGTAATTTACTTG	-27	True	NA	-22	True	AATAAA	-15	NA	693139	485153	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_486765_488978_489039_491124_491187_497366_497490_499644_499701_532468_532611_549174_549292_553853_553921_555226_555289_555953_556014_556483_556565_562783_562846_564032_564155_564544_564703_564863_564930_572519_572645_576756_576883_592468_592588_598020_598124_598859_598942_599079_599226_610097_610179_617710_617836_619429_619544_629834_629962_632940_633118_637700_637862_693018
H1_mix_00074739	chr6	-	1123	1	FSM	ENSG00000188996.5	ENST00000380907.3	1162	1	-62	101	-62	-101	mono-exon	FALSE	NA	NA	NA	NA	NA	171	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGGGTTGAAAATTTGGA	NA	False	NA	NA	False	ACTAAA	-15	NA	657162	656039	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_656000_657200
H1_mix_00074740	chr6	-	536	3	FSM	ENSG00000112685.14	ENST00000475028.2	536	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	25.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATATTTCTTTATGGCT	4	True	NA	NA	False	NA	NA	NA	693108	679142	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_679515_689138_689213_693018
H1_mix_00074741	chr6	-	1674	11	FSM	ENSG00000112699.11	ENST00000380815.5	1665	11	0	-9	0	9	multi-exon	FALSE	canonical	3	262	junction_5	25.0511476783001	165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGTGGATGTTTTCTCC	-17	True	NA	-1	True	ATTAAA	-33	NA	2245605	1623796	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_1624232_1624471_1624541_1726415_1726513_1742467_1742587_1930102_1930231_1959866_1959972_1960773_1960967_2115770_2115881_2117468_2117557_2124686_2124732_2245320
H1_mix_00074742	chr6	-	2480	7	FSM	ENSG00000021355.13	ENST00000380739.6	2476	7	0	-4	0	4	multi-exon	FALSE	canonical	3	208	junction_5	9.91071249821234	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCAGGCCTCTTCTTAT	-1	True	NA	3	True	AATAAA	-28	NA	2841863	2832327	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_2834013_2835855_2836024_2836107_2836251_2837881_2838000_2838548_2838687_2840418_2840595_2841811
H1_mix_00074743	chr6	-	1476	3	FSM	ENSG00000230438.8	ENST00000654948.2	1895	3	156	263	-1	110	multi-exon	FALSE	canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCCCTTTAAGGCACAAA	5157	False	NA	NA	False	NA	NA	NA	2876457	2854464	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_2855691_2857910_2857996_2876292
H1_mix_00074744	chr6	-	4143	7	FSM	ENSG00000170542.6	ENST00000380698.5	4143	7	0	0	0	0	multi-exon	FALSE	canonical	3	1513	junction_3	151.891865775916	310	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATCTAGATTTTCCCTT	0	True	NA	-7	True	AATAAA	-24	NA	2903309	2887269	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_2890571_2891832_2891989_2893410_2893554_2895390_2895509_2896052_2896191_2900443_2900622_2903200
H1_mix_00074745	chr6	-	1496	7	FSM	ENSG00000124570.21	ENST00000380524.5	1495	7	0	-1	0	1	multi-exon	FALSE	canonical	2	23	junction_6	165.58826112446	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGTGTGTTTGTGTGTCTG	19	True	NA	-9	True	AATAAA	-29	NA	2962108	2948157	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2961893
H1_mix_00074746	chr6	-	12641	6	FSM	ENSG00000124570.21	ENST00000643314.1	3265	6	-9375	-1	12	1	multi-exon	FALSE	canonical	2	339	junction_2	55.003999854556	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGTGTGTTTGTGTGTCTG	1542	False	NA	-9	True	AATAAA	-29	NA	2970702	2948157	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167
H1_mix_00074747	chr6	-	1371	7	FSM	ENSG00000124570.21	ENST00000380529.5	1370	7	0	-1	0	1	multi-exon	FALSE	canonical	2	133	junction_6	127.133023072511	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGTGTGTTTGTGTGTCTG	1038	False	NA	-9	True	AATAAA	-29	NA	2971206	2948157	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2971116
H1_mix_00074748	chr6	-	1401	7	FSM	ENSG00000124570.21	ENST00000642543.1	1384	7	0	-17	0	1	multi-exon	FALSE	canonical	1	1	junction_5	208.054213020442	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGTGTGTTTGTGTGTCTG	9	True	NA	-9	True	AATAAA	-29	NA	2971276	2948157	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2968778_2968914_2971116
H1_mix_00074749	chr6	-	1639	7	FSM	ENSG00000124570.21	ENST00000643098.1	1638	7	0	-1	0	1	multi-exon	FALSE	canonical	2	106	junction_6	136.435169789741	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGTGTGTTTGTGTGTCTG	-3	True	NA	-9	True	AATAAA	-29	NA	2971605	2948157	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2971247
H1_mix_00074750	chr6	-	1354	7	FSM	ENSG00000124570.21	ENST00000380539.7	1315	7	-38	-1	0	1	multi-exon	FALSE	canonical	2	114	junction_6	133.667497919277	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGTGTGTTTGTGTGTCTG	-3	True	NA	-9	True	AATAAA	-29	NA	2971605	2948157	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2971532
H1_mix_00074751	chr6	-	1880	7	FSM	ENSG00000124570.21	ENST00000380546.7	1375	7	-504	-1	76	1	multi-exon	FALSE	canonical	2	55	junction_6	154.266454191729	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGTGTGTTTGTGTGTCTG	155	False	NA	-9	True	AATAAA	-29	NA	2972089	2948157	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2971490
H1_mix_00074752	chr6	-	1973	8	FSM	ENSG00000124570.21	ENST00000616722.4	2036	8	76	-13	76	1	multi-exon	FALSE	canonical	2	2	junction_7	201.956451155355	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGTGTGTTTGTGTGTCTG	155	False	NA	-9	True	AATAAA	-29	NA	2972089	2948157	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2968778_2968914_2971532
H1_mix_00074753	chr6	-	1268	2	FSM	ENSG00000224846.3	ENST00000660868.1	1268	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGGCAGGAAGTCCTG	NA	False	NA	NA	False	ATTAAA	-16	NA	2999604	2989335	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_2990012_2999012
H1_mix_00074754	chr6	-	650	1	FSM	ENSG00000271361.1	ENST00000604204.1	631	1	0	-19	0	19	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTCCAAGGCTGAGAGGA	1119	False	NA	NA	False	NA	NA	NA	3023772	3023122	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_3023100_3023800
H1_mix_00074755	chr6	-	850	1	FSM	ENSG00000272277.1	ENST00000606441.1	850	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCGGGCGCGGTTGTTCA	22	False	NA	-8	True	AATAAA	-15	NA	3068894	3068044	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_3068000_3068900
H1_mix_00074756	chr6	-	1616	4	FSM	ENSG00000137267.7	ENST00000333628.4	1616	4	0	0	0	0	multi-exon	FALSE	canonical	3	1350	junction_2	26.5371856499935	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGGTCTGTGTTCTCA	-1	True	NA	-5	True	AATAAA	-18	NA	3157544	3153665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_3154924_3155624_3155736_3156043_3156153_3157406
H1_mix_00074757	chr6	-	1912	3	FSM	ENSG00000137267.7	ENST00000679907.1	1912	3	0	0	0	0	multi-exon	FALSE	canonical	3	1383	junction_2	16	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTAGAAAACCTTGTGGT	0	True	NA	-16	True	AATAAA	-7	NA	3157543	3153676	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_3154924_3155624_3156153_3157406
H1_mix_00074758	chr6	-	2306	3	FSM	ENSG00000137267.7	ENST00000680036.1	2284	3	0	-22	0	0	multi-exon	FALSE	canonical	3	1350	junction_1	16.5	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTAGAAAACCTTGTGGT	-1	True	NA	-16	True	AATAAA	-7	NA	3157544	3153676	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_3155736_3156043_3156153_3157406
H1_mix_00074759	chr6	-	2614	2	FSM	ENSG00000137267.7	ENST00000680967.1	2592	2	0	-22	0	0	multi-exon	FALSE	canonical	3	1383	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTAGAAAACCTTGTGGT	-1	True	NA	-16	True	AATAAA	-7	NA	3157544	3153676	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_3156153_3157406
H1_mix_00074760	chr6	-	573	5	Fusion	ENSG00000216819.1_ENSG00000137285.11	novel	1922	4	NA	NA	0	-317	multi-exon	TRUE	canonical	0	0	junction_1	1001.43706117759	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGGTCCACCAGCTGGTG	4181	False	NA	NA	False	NA	NA	NA	3227557	3177360	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr6_-_3177398_3225566_3225812_3226158_3226270_3226560_3226670_3227486
H1_mix_00074761	chr6	-	1466	3	FSM	ENSG00000230269.7	ENST00000425384.7	1620	3	18	136	18	-136	multi-exon	FALSE	canonical	2	5	junction_2	1.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGATTCTGATATTAGGTC	6	True	NA	50	True	AATAAA	-17	NA	3195766	3182765	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_3183727_3190826_3191231_3195665
H1_mix_00074762	chr6	-	1493	3	FSM	ENSG00000230269.7	ENST00000435043.3	1651	3	18	140	18	-136	multi-exon	FALSE	canonical	2	5	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGATTCTGATATTAGGTC	6	True	NA	50	True	AATAAA	-17	NA	3195766	3182765	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_3183727_3190826_3191258_3195665
H1_mix_00074763	chr6	-	2988	2	FSM	ENSG00000137285.11	ENST00000681707.1	3592	2	0	604	0	349	multi-exon	FALSE	canonical	3	2395	junction_1	0	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTTCCCTCCTTTAAAT	4476	False	NA	NA	False	ACTAAA	-22	NA	3227262	3223927	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_3225812_3226158
H1_mix_00074764	chr6	-	3091	3	FSM	ENSG00000137285.11	ENST00000680070.1	3695	3	0	604	0	349	multi-exon	FALSE	canonical	3	2296	junction_2	49.5	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTTCCCTCCTTTAAAT	-5	True	NA	NA	False	ACTAAA	-22	NA	3227656	3223927	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_3225812_3226158_3226270_3226560
H1_mix_00074765	chr6	-	2500	3	FSM	ENSG00000137285.11	ENST00000681757.1	3070	3	0	570	0	383	multi-exon	FALSE	canonical	3	2236	junction_2	79.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTATATAGTTGTGCTATG	4181	False	NA	NA	False	TTTAAA	-16	NA	3227557	3223893	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_3225812_3226158_3226670_3227486
H1_mix_00074766	chr6	-	1922	4	FSM	ENSG00000137285.11	ENST00000259818.8	1922	4	0	0	0	0	multi-exon	FALSE	canonical	3	2236	junction_3	65.5591336123351	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTACTTGAAAGCACAGT	-2	True	NA	-18	True	AATAAA	-16	NA	3227653	3224276	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_3225812_3226158_3226270_3226560_3226670_3227486
H1_mix_00074767	chr6	-	6634	10	FSM	ENSG00000137266.15	ENST00000406686.8	6634	10	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_4	11.789302537512	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCTCTCCATAGCCCTG	-10	True	NA	-12	True	AATAAA	-15	NA	3457050	3268972	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_3273413_3283851_3283976_3285078_3285112_3286858_3287092_3289763_3289867_3298090_3298219_3323833_3324003_3410187_3410343_3415751_3415856_3455905
H1_mix_00074768	chr6	-	3292	9	FSM	ENSG00000137266.15	ENST00000485307.5	1574	9	-1067	-651	-60	651	multi-exon	FALSE	canonical	3	56	junction_3	12.4191132936293	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGCACGCCTCCACTAAA	NA	False	NA	-32	True	NA	NA	NA	3457110	3282813	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_3283976_3285078_3285112_3286858_3287092_3289763_3289867_3298090_3298219_3323833_3324003_3410187_3410343_3415751_3415856_3455905
H1_mix_00074769	chr6	-	1578	4	FSM	ENSG00000137266.15	ENST00000380298.2	1574	4	0	-4	0	4	multi-exon	FALSE	canonical	3	72	junction_1	4.18993502999218	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCGTGTGTTTACATAGG	520	False	NA	1	True	AATAAA	-21	NA	3456559	3323337	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_3324003_3410187_3410343_3415751_3415856_3455905
H1_mix_00074770	chr6	-	1968	5	FSM	ENSG00000168994.14	ENST00000380283.5	1878	5	-90	0	-90	0	multi-exon	FALSE	canonical	3	23	junction_3	1.78535710713571	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGATCTGTCCAGGATGT	1153	False	NA	-17	True	AATAAA	-14	NA	3751803	3722618	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_3723737_3727550_3727663_3737078_3737197_3738056_3738149_3751275
H1_mix_00074771	chr6	-	1368	10	FSM	ENSG00000198721.13	ENST00000380118.8	1368	10	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_9	109.592285932006	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTAAGAATTCACACAGGT	-11	True	NA	-18	True	AATAAA	-17	NA	4135575	4115705	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_4116030_4117307_4117452_4119185_4119276_4125249_4125371_4126134_4126238_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133712_4135510
H1_mix_00074772	chr6	-	1380	10	FSM	ENSG00000198721.13	ENST00000361538.6	1380	10	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_9	131.889216511809	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTAAGAATTCACACAGGT	-1	True	NA	-18	True	AATAAA	-17	NA	4135597	4115705	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_4116030_4117307_4117452_4119185_4119276_4125249_4125371_4126134_4126238_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133702_4135510
H1_mix_00074773	chr6	-	1300	9	NIC	ENSG00000198721.13	novel	1380	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	101	junction_2	222.885620891075	3218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTAAGAATTCACACAGGT	-1	True	NA	-18	True	AATAAA	-17	NA	4135597	4115705	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_4116030_4117307_4117452_4125249_4125371_4126134_4126238_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133712_4135510
H1_mix_00074774	chr6	-	1488	8	FSM	ENSG00000124787.14	ENST00000380051.7	1488	8	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_3	36.4876272012241	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGGCCAGTCCCTGTTGT	-7	True	NA	NA	False	AATAAA	-18	NA	5004037	4994716	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_4995277_4995950_4996086_4996221_4996421_4998715_4998842_4999808_4999905_5000562_5000632_5002100_5002246_5003879
H1_mix_00074775	chr6	-	1088	7	FSM	ENSG00000124787.14	ENST00000319533.9	1088	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	78.1039193781095	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACGCTTGCTTTCAGAT	-6	True	NA	-6	True	AATAAA	-24	NA	5004036	4995046	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_4995277_4995950_4996086_4996221_4996421_4998715_4998842_4999808_4999905_5002100_5002246_5003879
H1_mix_00074776	chr6	-	1058	7	FSM	ENSG00000124787.14	ENST00000618533.4	1056	7	0	-2	0	0	multi-exon	FALSE	canonical	3	36	junction_3	79.2520592091391	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACGCTTGCTTTCAGAT	NA	False	NA	-6	True	AATAAA	-24	NA	5004063	4995046	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_4995277_4995950_4996086_4996221_4996421_4999808_4999905_5000562_5000632_5002100_5002246_5003879
H1_mix_00074778	chr6	-	1497	3	FSM	ENSG00000214113.11	ENST00000330636.9	1497	3	0	0	0	0	multi-exon	FALSE	canonical	3	650	junction_1	33.5	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTGGAAACAGATTCATT	-10	True	NA	-13	True	AATAAA	-22	NA	5260950	5108418	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_5109492_5216617_5216739_5260647
H1_mix_00074779	chr6	-	592	3	FSM	ENSG00000214113.11	ENST00000500576.4	592	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	345	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGTGCTTTTGTAGAT	2	True	NA	-1	True	AATAAA	-17	NA	5260737	5186599	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_5186981_5216617_5216739_5260647
H1_mix_00074780	chr6	-	419	1	FSM	ENSG00000217239.3	ENST00000407959.1	354	1	-20	-45	-20	45	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGGAGCAAGGGGGGAG	NA	False	NA	NA	False	AATAAA	-45	NA	5788719	5788300	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_5788300_5788700
H1_mix_00074781	chr6	-	464	3	FSM	ENSG00000124491.16	ENST00000479211.1	579	3	115	0	115	0	multi-exon	FALSE	canonical	2	4	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAAGAAAGAGAAGAGTA	5982	False	NA	NA	False	TTTAAA	-35	NA	6305539	6250906	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_6250930_6266557_6266810_6305350
H1_mix_00074783	chr6	-	3005	1	FSM	ENSG00000261211.2	ENST00000563225.2	6640	1	3625	10	3607	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAACCTTATCATTGGTGT	3590	False	NA	-9	True	AATATA	-15	NA	6683323	6680318	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_6680300_6683300
H1_mix_00074784	chr6	-	3249	9	NNC	ENSG00000124783.14	novel	3248	9	NA	NA	0	39810	intron_retention	FALSE	non_canonical	0	0	junction_1	248.045831198591	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGACCTTCTCCTGCTTGC	-2	True	NA	NA	False	NA	NA	NA	7313188	7228495	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_7228523_7287570_7289932_7295391_7295486_7297922_7298002_7298746_7298824_7301309_7301573_7303549_7303638_7309916_7310030_7313041
H1_mix_00074785	chr6	-	3251	9	NNC	ENSG00000124783.14	novel	3248	9	NA	NA	0	4493	intron_retention	FALSE	non_canonical	0	0	junction_1	248.045831198591	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAAAGAAAAAAGAA	-2	True	NA	NA	False	NA	NA	NA	7313188	7263812	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_7263840_7287568_7289932_7295391_7295486_7297922_7298002_7298746_7298824_7301309_7301573_7303549_7303638_7309916_7310030_7313041
H1_mix_00074786	chr6	-	9670	8	FSM	ENSG00000124783.14	ENST00000244763.9	9661	8	0	-9	0	9	multi-exon	FALSE	canonical	3	661	junction_7	35.4550592227653	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATGAAATGTTTTCTAAA	-13	True	NA	-22	True	ATTAAA	-26	NA	7313199	7281133	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_7289932_7295391_7295486_7297922_7298002_7298746_7298824_7301309_7301573_7303549_7303638_7309916_7310030_7313041
H1_mix_00074788	chr6	-	755	1	FSM	ENSG00000220472.1	ENST00000407940.1	730	1	62	-87	62	87	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATGATACAGTGGACTT	7997	False	NA	NA	False	TATAAA	-26	NA	7339506	7338751	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_7338800_7339500
H1_mix_00074789	chr6	-	347	1	FSM	ENSG00000234115.2	ENST00000440581.1	1241	1	398	496	398	-496	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGATGACATGGTGGCCC	NA	False	NA	NA	False	NA	NA	NA	7517442	7517095	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_7517100_7517400
H1_mix_00074790	chr6	-	895	1	FSM	ENSG00000261189.2	ENST00000561592.1	888	1	0	-7	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACCTTCTGATACAGTG	1745	False	NA	1	True	AATAAA	-28	NA	7541338	7540443	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_7540400_7541300
H1_mix_00074791	chr6	-	1480	2	FSM	ENSG00000261189.2	ENST00000690863.1	911	2	-559	-10	-559	1	multi-exon	FALSE	canonical	3	17	junction_1	0	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACCTTCTGATACAGTG	NA	False	NA	1	True	AATAAA	-28	NA	7543640	7540443	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_7541054_7542770
H1_mix_00074792	chr6	-	2178	2	NNC	ENSG00000261189.2	novel	823	2	NA	NA	-797	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCGCTAATTACCTTCTGA	NA	False	NA	-6	True	AATAAA	-21	NA	7543878	7540450	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_7541054_7542303
H1_mix_00074793	chr6	-	2941	10	FSM	ENSG00000239264.9	ENST00000379757.9	2938	10	0	-3	0	3	multi-exon	FALSE	canonical	3	872	junction_1	106.360440060563	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTTTCCTTCAATGTTA	2	True	NA	0	True	AATAAA	-20	NA	7910788	7881513	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_7883267_7884358_7884489_7885960_7886044_7888704_7888849_7889494_7889582_7891620_7891737_7895105_7895203_7899575_7899682_7904573_7904724_7910513
H1_mix_00074794	chr6	-	3038	13	FSM	ENSG00000259040.5	ENST00000439343.2	3030	13	0	-8	0	8	multi-exon	FALSE	canonical	0	0	junction_9	375.81751629688	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTTTCCTTCAATGTTA	12	True	NA	0	True	AATAAA	-20	NA	8064364	7881513	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_7883267_7884358_7884489_7885960_7886044_7888704_7888849_7889494_7889582_7891620_7891737_7895105_7895203_7899575_7899682_7904573_7904724_8026366_8026426_8041138_8041269_8062533_8062617_8064264
H1_mix_00074795	chr6	-	2659	5	FSM	ENSG00000188428.20	ENST00000397457.7	2659	5	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_2	43.8940485715319	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTTGTTTATTATTCCA	-13	True	NA	-3	True	AATAAA	-13	NA	8064389	8013566	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_8015829_8026366_8026426_8041138_8041269_8062533_8062617_8064264
H1_mix_00074796	chr6	-	5740	6	FSM	ENSG00000188428.20	ENST00000244777.6	2445	6	8	-3303	0	2892	multi-exon	FALSE	canonical	3	18	junction_3	126.339859110259	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTGGATCCAGATTTA	-9	True	NA	18	True	ATTAAA	-40	NA	8064385	8010674	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_8015829_8026366_8026426_8027206_8027400_8041138_8041269_8062533_8062617_8064264
H1_mix_00074800	chr6	-	573	4	FSM	ENSG00000124802.12	ENST00000429723.6	562	4	-11	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	881.684876938593	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGGAATCAGTTTTTAC	-13	True	NA	2	True	CATAAA	-16	NA	8102559	8073359	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_8073511_8090185_8090282_8097266_8097468_8102434
H1_mix_00074801	chr6	-	591	4	FSM	ENSG00000124802.12	ENST00000502429.5	591	4	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	852.705628507804	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACATTATTTTGAATTTT	141	False	NA	NA	False	NA	NA	NA	8102481	8078493	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_8078741_8090185_8090282_8097266_8097468_8102434
H1_mix_00074802	chr6	-	2096	4	FSM	ENSG00000124802.12	ENST00000379715.10	1047	4	0	-1049	0	148	multi-exon	FALSE	canonical	3	1504	junction_1	207.25346800476	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCACTGACCAGCCGTT	-2	True	NA	-12	True	AATAAA	-19	NA	8102548	8078345	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_8080031_8090185_8090282_8097266_8097468_8102434
H1_mix_00074803	chr6	-	654	3	FSM	ENSG00000124802.12	ENST00000507463.1	654	3	0	0	0	0	multi-exon	FALSE	canonical	3	1735	junction_2	138	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGCATTTTCAGCTTAT	-13	True	NA	1	True	AATAAA	-33	NA	8102559	8089953	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_8090282_8097266_8097468_8102434
H1_mix_00074804	chr6	-	3566	11	FSM	ENSG00000124786.12	ENST00000644923.2	3566	11	0	0	0	0	multi-exon	TRUE	canonical	3	66	junction_6	13.1030530793399	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCCTCTACACTTTCCT	4	True	NA	NA	False	TATAAA	-21	NA	8435545	8411434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_8413700_8414907_8414978_8416883_8416996_8417401_8417495_8419579_8419678_8420720_8420829_8422469_8422625_8427936_8428059_8429863_8430158_8434384_8434431_8435342
H1_mix_00074805	chr6	-	1778	10	NIC	ENSG00000124786.12	novel	2137	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	29.4383641520825	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTTAATAGAATTTTG	15	True	NA	-1	True	AATAAA	-24	NA	8435483	8413067	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_8413700_8414907_8414978_8416883_8416996_8419579_8419678_8420720_8420829_8422469_8422625_8427936_8428059_8429863_8430158_8434384_8434431_8435342
H1_mix_00074806	chr6	-	231	1	FSM	ENSG00000217181.1	ENST00000407436.1	479	1	-79	327	-79	-327	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACCCCCAAGTGTTACCA	NA	False	NA	NA	False	AAAAAG	-2	NA	10575306	10575075	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_10575100_10575300
H1_mix_00074807	chr6	-	543	4	NIC	ENSG00000137434.12	novel	627	5	NA	NA	-2	-4	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	1.88561808316413	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACTAATTGTGTCGTCTT	-5	True	NA	-6	True	ATTAAA	-13	NA	10694618	10671425	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_10671599_10683186_10683233_10686965_10687165_10694493
H1_mix_00074808	chr6	-	3988	8	FSM	ENSG00000197977.4	ENST00000354666.4	3988	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	10.1398385850373	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTTGCGAGTTTTATT	7	True	NA	NA	False	AATAAA	-18	NA	11044305	10980758	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_10983907_10989702_10989838_10990317_10990443_10995006_10995179_11000086_11000165_11005371_11005560_11010745_11010810_11044227
H1_mix_00074809	chr6	-	4519	7	FSM	ENSG00000111859.17	ENST00000379446.10	4522	7	3	0	3	0	multi-exon	FALSE	canonical	3	24	junction_6	5.78551831923659	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACTGGGTTTTCTTTTTC	6	True	NA	-3	True	ATTAAA	-23	NA	11232665	11183297	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_11185672_11188217_11188308_11189963_11191206_11192344_11192447_11193590_11193693_11213280_11213728_11232503
H1_mix_00074810	chr6	-	473	1	FSM	ENSG00000272379.1	ENST00000606393.1	473	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACCGTCACATTGTTTGG	NA	False	NA	-5	True	AATAAA	-20	NA	13290490	13290017	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_13290000_13290500
H1_mix_00074811	chr6	-	1280	8	NIC	ENSG00000145979.18	novel	1282	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	288.703505842437	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-9	True	NA	-21	True	AATAAA	-16	NA	13328531	13304950	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_13305188_13306397_13306528_13307595_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326907_13328295
H1_mix_00074812	chr6	-	1333	8	NIC	ENSG00000145979.18	novel	1282	8	NA	NA	5	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	303.600502809403	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGTGTTGCTGTGTTGG	-4	True	NA	-20	True	AATAAA	-17	NA	13328526	13304949	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_13305188_13306397_13306528_13307595_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326964_13328295
H1_mix_00074813	chr6	-	1121	8	NIC	ENSG00000145979.18	novel	1116	8	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	240.847822222639	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGTGTTGCTGTGTTGG	-9	True	NA	-20	True	AATAAA	-17	NA	13328531	13304949	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_13305188_13306397_13306528_13307595_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326907_13328455
H1_mix_00074814	chr6	-	1178	8	NIC	ENSG00000145979.18	novel	1116	8	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	289.949467800082	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGTGTTGCTGTGTTGG	-9	True	NA	-20	True	AATAAA	-17	NA	13328531	13304949	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_13305188_13306397_13306528_13307595_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326964_13328455
H1_mix_00074815	chr6	-	1237	7	NIC	ENSG00000145979.18	novel	1116	8	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	17	junction_2	319.582235982471	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGTGTTGCTGTGTTGG	-9	True	NA	-20	True	AATAAA	-17	NA	13328531	13304949	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_13305188_13306397_13306528_13307595_13307746_13316570_13316709_13320907_13321096_13326786_13326964_13328315
H1_mix_00074816	chr6	-	1183	8	FSM	ENSG00000145979.18	ENST00000356436.8	1116	8	-13	-54	0	54	multi-exon	FALSE	canonical	0	0	junction_2	246.221403602199	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCATCTCTGAATAGCAT	-22	True	NA	33	True	NA	NA	NA	13328544	13304896	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_13305188_13306397_13306528_13307599_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326907_13328455
H1_mix_00074817	chr6	-	1261	8	NIC	ENSG00000145979.18	novel	1116	8	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	282.229317674656	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGTGTTGCTGTGTTGG	-9	True	NA	-20	True	AATAAA	-17	NA	13328531	13304949	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_13305188_13306397_13306528_13307595_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326907_13328315
H1_mix_00074818	chr6	-	1040	7	NIC	ENSG00000145979.18	novel	1116	8	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	276.933806772184	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGTGTTGCTGTGTTGG	-9	True	NA	-20	True	AATAAA	-17	NA	13328531	13304949	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_13305188_13306397_13306528_13307595_13307746_13316570_13316709_13320907_13321096_13326786_13326907_13328455
H1_mix_00074819	chr6	-	1318	8	NIC	ENSG00000145979.18	novel	1116	8	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	17	junction_2	299.158343165813	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGTGTTGCTGTGTTGG	-9	True	NA	-20	True	AATAAA	-17	NA	13328531	13304949	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_13305188_13306397_13306528_13307595_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326964_13328315
H1_mix_00074820	chr6	-	1180	7	NIC	ENSG00000145979.18	novel	1116	8	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	305.408833460258	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGTGTTGCTGTGTTGG	-9	True	NA	-20	True	AATAAA	-17	NA	13328531	13304949	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_13305188_13306397_13306528_13307595_13307746_13316570_13316709_13320907_13321096_13326786_13326907_13328315
H1_mix_00074821	chr6	-	1283	8	FSM	ENSG00000145979.18	ENST00000379300.8	1282	8	0	-1	0	1	multi-exon	FALSE	canonical	0	0	junction_2	292.831915289719	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGTGTTGCTGTGTTGG	-15	True	NA	-20	True	AATAAA	-17	NA	13328537	13304949	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_13305188_13306397_13306528_13307599_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326907_13328295
H1_mix_00074822	chr6	-	1060	7	FSM	ENSG00000145979.18	ENST00000379307.6	1084	7	28	-4	0	1	multi-exon	FALSE	canonical	0	0	junction_2	281.490921503499	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGTGTTGCTGTGTTGG	-33	True	NA	-20	True	AATAAA	-17	NA	13328555	13304949	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_13305188_13306397_13306528_13307599_13307746_13316570_13316709_13320907_13321096_13326786_13326907_13328455
H1_mix_00074823	chr6	-	1003	7	FSM	ENSG00000145979.18	ENST00000343141.8	1027	7	28	-4	0	1	multi-exon	FALSE	canonical	0	0	junction_2	289.738196001532	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGTGTTGCTGTGTTGG	-33	True	NA	-20	True	AATAAA	-17	NA	13328555	13304949	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_13305188_13306397_13306528_13307599_13307746_13320907_13321096_13325093_13325175_13326786_13326907_13328455
H1_mix_00074824	chr6	-	1198	8	NIC	ENSG00000145979.18	novel	1116	8	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	294.053306287781	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGTGTTGCTGTGTTGG	-33	True	NA	-20	True	AATAAA	-17	NA	13328555	13304949	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_13305188_13306397_13306528_13307599_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326964_13328455
H1_mix_00074827	chr6	-	8796	2	FSM	ENSG00000145990.11	ENST00000379287.4	8796	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCAGCTCTTTGCCTGTTT	19	True	NA	NA	False	AATAAA	-20	NA	13487600	13357829	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_13365663_13486637
H1_mix_00074828	chr6	-	2383	2	FSM	ENSG00000145990.11	ENST00000603223.1	2388	2	0	5	0	2	multi-exon	FALSE	canonical	2	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGGCGAGTGTGATGTA	NA	False	NA	NA	False	AATAAA	-27	NA	13487662	13469272	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_13470631_13486637
H1_mix_00074829	chr6	-	3384	14	FSM	ENSG00000010017.13	ENST00000011619.6	3384	14	0	0	0	0	multi-exon	TRUE	canonical	3	90	junction_12	12.3360250807503	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTGTCAATTGAGTTTA	6	True	NA	-1	True	ATTAAA	-17	NA	13711835	13621497	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_13622493_13625652_13625765_13632369_13632522_13634430_13634553_13637807_13637956_13639562_13639754_13641198_13641308_13642478_13642592_13644544_13644730_13652658_13652682_13657108_13657277_13658779_13658833_13696784_13696897_13710934
H1_mix_00074830	chr6	-	5476	9	FSM	ENSG00000050393.12	ENST00000379170.9	5460	9	-11	-5	0	5	multi-exon	FALSE	canonical	3	353	junction_1	43.6348484585429	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTTTTCATCATTCAAAA	-63	True	NA	-16	True	AATAAA	-21	NA	13814568	13786551	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_13790865_13791877_13791993_13793893_13793948_13798832_13798905_13800340_13800383_13801287_13801390_13802242_13802347_13806924_13807045_13814014
H1_mix_00074831	chr6	-	747	2	NNC	ENSG00000050393.12	novel	5460	9	NA	NA	42	-19567	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTTTTTTTTCTTTTGG	-10	True	NA	NA	False	ATTAAA	-21	NA	13814515	13810354	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_13810601_13814014
H1_mix_00074832	chr6	-	6051	2	ISM	ENSG00000226673.2	ENST00000635227.1	776	3	-1479	-2921	-1479	0	intron_retention	FALSE	canonical	3	12	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGTCGTGGTCATTCAT	NA	False	NA	-5	True	AATAAA	-19	NA	14286933	14280126	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_14283189_14283944
H1_mix_00074833	chr6	-	3379	5	Intergenic	novelGene_1221	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	14	junction_4	8.74642784226795	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTATTGGTGCGTGGTCA	5352	False	NA	-28	True	AATAAA	-18	NA	14297125	14290582	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_14292326_14292999_14293297_14294807_14294934_14295304_14295384_14295991
H1_mix_00074834	chr6	-	778	4	FSM	ENSG00000234261.5	ENST00000629853.2	778	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	15.7691682300198	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATCAACTTTTCTAGATC	1	True	NA	NA	False	NA	NA	NA	15021964	14661828	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_14662294_14789989_14790099_14997415_14997476_15021820
H1_mix_00074836	chr6	-	1314	3	NIC	ENSG00000234261.5	novel	1017	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_2	10	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGTGTCTGAGGGGTTTT	1	True	NA	0	True	AATAAA	-17	NA	15021964	14976208	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_14977319_14997415_14997476_15021820
H1_mix_00074837	chr6	-	1537	4	NNC	ENSG00000234261.5	novel	1017	4	NA	NA	-59	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	19.3448241713959	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGTGTCTGAGGGGTTTT	143	False	NA	0	True	AATAAA	-17	NA	15022023	14976208	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_14977319_14997415_14997476_15008924_15009085_15021816
H1_mix_00074838	chr6	-	1311	3	NNC	ENSG00000234261.5	novel	1017	4	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_2	6	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGTGTCTGAGGGGTTTT	8	True	NA	0	True	AATAAA	-17	NA	15021957	14976208	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_14977319_14997415_14997476_15021816
H1_mix_00074840	chr6	-	1383	10	FSM	ENSG00000047579.20	ENST00000344537.10	1383	10	0	0	0	0	multi-exon	FALSE	canonical	1	87	junction_2	48.9628228831974	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGAGCGCACAGAGCTAG	-10	True	NA	-12	True	AATAAA	-17	NA	15663028	15522806	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_15523220_15524525_15524670_15533239_15533396_15593058_15593082_15615266_15615400_15627342_15627476_15637743_15637805_15651312_15651364_15652086_15652141_15662813
H1_mix_00074841	chr6	-	1374	9	FSM	ENSG00000047579.20	ENST00000355917.7	1359	9	0	-15	0	12	multi-exon	TRUE	canonical	1	23	junction_7	78.3923425788514	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGCTAGTTTGTACACAAA	-40	True	NA	0	True	AATAAA	-29	NA	15663058	15522794	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_15523220_15524525_15524670_15533239_15533396_15593058_15593082_15615266_15615400_15627342_15627476_15637743_15637805_15652086_15652141_15662813
H1_mix_00074842	chr6	-	1320	8	FSM	ENSG00000047579.20	ENST00000622898.4	1305	8	0	-15	0	12	multi-exon	FALSE	canonical	1	16	junction_7	84.019434097847	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGCTAGTTTGTACACAAA	-40	True	NA	0	True	AATAAA	-29	NA	15663058	15522794	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_15523220_15524525_15524670_15533239_15533396_15593058_15593082_15615266_15615400_15627342_15627476_15637743_15637805_15662813
H1_mix_00074844	chr6	-	2546	3	NNC	ENSG00000282024.1	novel	1026	2	NA	NA	34	55	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	101	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGGTGGTCTCTTCAC	3246	False	NA	NA	False	AATAAA	-24	NA	16264519	16259045	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_16259377_16262176_16264213_16264340
H1_mix_00074846	chr6	-	1705	3	NIC	ENSG00000282024.1	novel	1026	2	NA	NA	16	54	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	88	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTGGTGGTCTCTTCA	3228	False	NA	NA	False	AATAAA	-23	NA	16264537	16259046	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_16259377_16262176_16263355_16264340
H1_mix_00074847	chr6	-	886	2	FSM	ENSG00000282024.1	ENST00000632370.1	886	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCCCGACATTAAAGAAAAC	3212	False	NA	NA	False	AATACA	-18	NA	16264553	16262681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_16263355_16264340
H1_mix_00074848	chr6	-	663	1	FSM	ENSG00000184612.8	ENST00000333817.7	754	1	110	-19	110	19	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTTCTAAGCTGGTCA	109	False	NA	NA	False	AATGAA	-19	NA	17531542	17530879	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_17530900_17531500
H1_mix_00074849	chr6	-	6028	22	FSM	ENSG00000124789.12	ENST00000262077.3	6026	22	0	-2	0	0	multi-exon	TRUE	canonical	3	234	junction_14	35.6783311080773	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTCTAGTTTTACCTC	-28	True	NA	-3	True	AATAAA	-16	NA	17706925	17615034	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_17616182_17616526_17616696_17624560_17624834_17625807_17626165_17628654_17629540_17632649_17632845_17637152_17637771_17639938_17640065_17646066_17646155_17647806_17647906_17649162_17649301_17661652_17661780_17662017_17662071_17665238_17665386_17668974_17669029_17669292_17669338_17669429_17669547_17674904_17675034_17675228_17675369_17675521_17675771_17688395_17688619_17706276
H1_mix_00074850	chr6	-	6943	38	FSM	ENSG00000137177.20	ENST00000378814.9	6924	38	0	-19	0	19	multi-exon	TRUE	canonical	2	8	junction_2	13.6291806568182	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTTAAAAATAATAATATCA	439	False	NA	60	True	NA	NA	NA	17987463	17759163	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_17760878_17764154_17764947_17771907_17772060_17773477_17773584_17775014_17775063_17777276_17777355_17778946_17779100_17779591_17779685_17780729_17780907_17781176_17781302_17783645_17783702_17785514_17785642_17787775_17787876_17794248_17794396_17794571_17794705_17796668_17796821_17799265_17799440_17799951_17800114_17804360_17804511_17805474_17805616_17808767_17808931_17817019_17817234_17825767_17825935_17826037_17826125_17828239_17828371_17831100_17831236_17833960_17834072_17836877_17837091_17837471_17837584_17849376_17849490_17850322_17850458_17851954_17852043_17855436_17855618_17856029_17856123_17873376_17873438_17898167_17898181_17987053_17987145_17987408
H1_mix_00074851	chr6	-	4023	16	FSM	ENSG00000137177.20	ENST00000502297.5	4009	16	0	-14	0	14	multi-exon	FALSE	canonical	2	13	junction_1	7.2357138939814	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATTTGTCTTTAATAACC	NA	False	NA	-16	True	AATACA	-30	NA	17794697	17759239	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_17760878_17764154_17764947_17771113_17771219_17771907_17772060_17773477_17773584_17775014_17775063_17777276_17777355_17778946_17779100_17779591_17779685_17780729_17780907_17781176_17781302_17783645_17783702_17785514_17785642_17787775_17787876_17794248_17794396_17794571
H1_mix_00074853	chr6	-	5720	37	FSM	ENSG00000137177.20	ENST00000378843.6	5707	37	0	-13	0	11	multi-exon	FALSE	canonical	2	8	junction_1	13.4146536332015	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCAATTTCAGAGATGGTA	421	False	NA	-5	True	ATTAAA	-28	NA	17987481	17763681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_17764947_17771907_17772060_17773477_17773584_17775014_17775063_17777276_17777355_17778946_17779100_17779591_17779685_17780729_17780907_17781176_17781302_17783645_17783702_17785514_17785642_17787775_17787876_17794248_17794396_17794571_17794705_17796668_17796821_17799265_17799440_17799951_17800114_17804360_17804511_17805474_17805616_17808767_17808931_17817019_17817234_17825767_17825935_17826037_17826125_17828239_17828371_17831100_17831236_17833960_17834072_17836877_17837091_17837471_17837584_17849376_17849490_17850322_17850458_17851954_17852043_17855436_17855618_17856029_17856123_17873376_17873438_17898167_17898181_17987053_17987145_17987408
H1_mix_00074855	chr6	-	1330	3	FSM	ENSG00000137177.20	ENST00000502704.2	1330	3	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	7.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCTGTGAGTCATTATA	4	True	NA	-3	True	AATAAA	-17	NA	17987623	17950405	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_17951430_17987053_17987145_17987408
H1_mix_00074856	chr6	-	2232	1	FSM	ENSG00000187566.6	ENST00000340650.6	2238	1	-32	38	-32	-38	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATATCTTCTCCACTATA	NA	False	NA	-3	True	ATTAAA	-23	NA	18122709	18120477	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_18120500_18122700
H1_mix_00074857	chr6	-	3184	9	FSM	ENSG00000137364.5	ENST00000309983.5	3184	9	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_8	27.5927413462309	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTTGTTTCATTTTAT	-8	True	NA	0	True	ATTAAA	-24	NA	18155077	18128310	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_18130781_18132132_18132178_18133803_18133890_18138962_18139038_18139664_18139718_18143595_18143729_18147822_18147916_18148987_18149172_18155032
H1_mix_00074859	chr6	-	3112	11	FSM	ENSG00000124795.17	ENST00000652576.1	1360	11	59	-1811	0	5	multi-exon	FALSE	canonical	0	0	junction_10	502.057855231845	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGTGAAAGTCTAGTTT	9	True	NA	-1	True	ATTAAA	-28	NA	18264208	18223854	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_18225731_18226173_18226243_18236451_18236601_18237380_18237517_18249650_18249840_18255730_18255852_18256360_18256456_18257952_18258063_18258303_18258406_18263842_18263997_18264097
H1_mix_00074860	chr6	-	3147	11	FSM	ENSG00000124795.17	ENST00000652689.1	3142	11	0	-5	0	5	multi-exon	FALSE	canonical	3	1455	junction_10	112.952379346342	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGTGAAAGTCTAGTTT	-11	True	NA	-1	True	ATTAAA	-28	NA	18264530	18223854	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_18225731_18226173_18226243_18236451_18236601_18237380_18237517_18249650_18249840_18255730_18255852_18256360_18256456_18257952_18258063_18258303_18258406_18263842_18263997_18264384
H1_mix_00074861	chr6	-	2851	10	FSM	ENSG00000124795.17	ENST00000651992.1	2851	10	0	0	0	0	multi-exon	FALSE	canonical	3	1458	junction_4	103.479227950753	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTATAAACCTTGTCAATAA	9	True	NA	-61	True	ACTAAA	-40	NA	18264208	18224216	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_18225731_18226173_18226243_18236451_18236601_18237380_18237517_18249650_18249840_18255730_18255852_18256360_18256456_18257952_18258063_18258303_18258406_18263842
H1_mix_00074864	chr6	-	395	1	FSM	ENSG00000217414.2	ENST00000404856.2	2007	1	674	938	674	-938	mono-exon	FALSE	NA	NA	NA	NA	NA	173	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTATGCTCTTTTCTGCC	NA	False	NA	NA	False	ATTAAA	-33	NA	18364749	18364354	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_18364400_18364700
H1_mix_00074866	chr6	-	1031	3	Intergenic	novelGene_1231	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	90	junction_1	11.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCGCGCATGAAAACCCAT	NA	False	NA	NA	False	NA	NA	NA	18759871	18754155	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_18754545_18757252_18757355_18759331
H1_mix_00074867	chr6	-	708	3	Intergenic	novelGene_1233	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	68	junction_1	22.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	NA	False	AATAAA	-22	NA	18759575	18754179	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_18754542_18757252_18757355_18759331
H1_mix_00074869	chr6	-	3580	8	ISM	ENSG00000172197.11	ENST00000324607.8	4325	13	83715	36	83715	-36	3prime_fragment	FALSE	canonical	3	18	junction_1	5.0548017179869	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGTTTTGTTTTTGAA	NA	False	NA	-35	True	AATAAA	-6	NA	20128754	20099719	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_20102413_20109597_20109750_20112875_20113009_20115287_20115353_20118436_20118541_20124407_20124601_20126516_20126701_20128698
H1_mix_00074872	chr6	-	504	1	Intergenic	novelGene_1243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	190	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACACATATTATCTGTCAA	NA	False	NA	NA	False	NA	NA	NA	21367044	21366540	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_21366500_21367000
H1_mix_00074873	chr6	-	204	1	FSM	ENSG00000231754.3	ENST00000637411.1	2106	1	1779	123	1768	-123	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGTGTCAAAAACCTCTC	1784	False	NA	NA	False	NA	NA	NA	21522004	21521800	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_21521800_21522000
H1_mix_00074874	chr6	-	535	6	ISM	ENSG00000112293.15	ENST00000474784.5	1030	11	100	8456	94	-31	5prime_fragment	FALSE	canonical	2	5	junction_2	1.01980390271856	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACAAGGATTCCTTAGGA	223	False	NA	NA	False	NA	NA	NA	24495105	24475151	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_24475232_24476180_24476279_24479880_24479960_24486074_24486131_24489414_24489498_24494966
H1_mix_00074875	chr6	-	1997	7	FSM	ENSG00000111802.14	ENST00000378198.9	1935	7	0	-62	0	62	multi-exon	FALSE	canonical	3	448	junction_2	56.6862711186168	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGCTCTACTGCTGCT	-16	True	NA	-11	True	ATTAAA	-19	NA	24666899	24649916	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_24651070_24652982_24653154_24654411_24654531_24657811_24657904_24658560_24658735_24666525_24666612_24666697
H1_mix_00074876	chr6	-	714	2	FSM	ENSG00000111802.14	ENST00000480495.1	714	2	0	0	0	0	multi-exon	FALSE	canonical	3	533	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTTTCCAGGTTCCAGG	-6	True	NA	NA	False	NA	NA	NA	24666786	24665986	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_24666612_24666697
H1_mix_00074877	chr6	-	887	1	FSM	ENSG00000272345.1	ENST00000607014.1	887	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGGATTGTTTAAAACAAA	4379	False	NA	-4	True	ATTAAA	-17	NA	24701793	24700906	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_24700900_24701800
H1_mix_00074878	chr6	-	2452	5	FSM	ENSG00000112308.13	ENST00000378119.9	2452	5	0	0	0	0	multi-exon	FALSE	canonical	3	2810	junction_2	145.354738484853	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGAAGTGTTAACTTTTT	1	True	NA	-12	True	AATAAA	-41	NA	24719154	24704860	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_24706263_24708776_24708912_24714317_24714441_24716147_24716325_24718539
H1_mix_00074879	chr6	-	5381	22	FSM	ENSG00000111913.20	ENST00000643898.2	5295	22	12	-98	0	96	multi-exon	FALSE	canonical	3	59	junction_9	34.952899957221	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTATTTTGAGACGAAGT	8	True	NA	93	True	NA	NA	NA	24935948	24804185	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_24806474_24809716_24809808_24818541_24818626_24825225_24825429_24828136_24828296_24830508_24830671_24832255_24832392_24835702_24835872_24839090_24839273_24842861_24843555_24848024_24848155_24849801_24849951_24850596_24850723_24852574_24852619_24860972_24861037_24865300_24865451_24869093_24869148_24870865_24870890_24872880_24872960_24873643_24873800_24875690_24875818_24935837
H1_mix_00074881	chr6	-	2449	14	FSM	ENSG00000111913.20	ENST00000378023.8	2442	14	0	-7	0	7	multi-exon	FALSE	canonical	3	18	junction_13	43.3607408395411	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCCAATTGAGCATCGTG	NA	False	NA	NA	False	AATAAA	-28	NA	24877355	24839351	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_24839600_24842861_24843555_24848024_24848155_24849801_24849951_24850596_24850723_24852574_24852619_24860972_24861037_24865300_24865451_24869093_24869148_24870865_24870890_24872880_24872960_24873643_24873800_24875690_24875818_24876950
H1_mix_00074882	chr6	-	3611	14	FSM	ENSG00000111913.20	ENST00000540914.5	3614	14	3	0	3	0	multi-exon	FALSE	canonical	3	18	junction_13	40.6003760148152	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAAAAAAAAAGTGTGG	NA	False	NA	NA	False	AATAAA	-7	NA	24877362	24839372	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_24840776_24842861_24843555_24848024_24848155_24849801_24849951_24850596_24850723_24852574_24852619_24860972_24861037_24865300_24865451_24869093_24869148_24870865_24870890_24872880_24872960_24873643_24873800_24875690_24875818_24876950
H1_mix_00074885	chr6	-	3345	14	FSM	ENSG00000111913.20	ENST00000645100.1	2704	14	-104	-537	0	0	multi-exon	FALSE	canonical	3	46	junction_1	27.6086342724614	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACTTCTTTTTTGGATAT	697	False	NA	NA	False	NA	NA	NA	24936052	24839441	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_24840776_24842861_24843555_24848024_24848155_24849801_24849951_24850596_24850723_24852574_24852619_24860972_24861037_24865300_24865451_24869093_24869148_24870865_24870890_24872880_24872960_24873643_24873800_24875690_24875818_24935837
H1_mix_00074886	chr6	-	771	1	FSM	ENSG00000187837.4	ENST00000343677.4	731	1	-5	-35	-5	35	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGCCTTTTCTTGTTCT	NA	False	NA	-8	True	AATAAA	-22	NA	26056475	26055704	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_26055700_26056500
H1_mix_00074887	chr6	-	762	2	FSM	ENSG00000180596.8	ENST00000314332.5	659	2	-16	-87	0	87	multi-exon	FALSE	canonical	3	14	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCATGATATATATTTAGA	3	True	NA	NA	False	AATAAA	-7	NA	26123926	26114785	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_26115136_26123514
H1_mix_00074890	chr6	-	503	1	FSM	ENSG00000197409.8	ENST00000356476.3	503	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTTCTATAAAAGTTGCT	-4	True	NA	NA	False	NA	NA	NA	26197286	26196783	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_26196800_26197300
H1_mix_00074892	chr6	-	1656	1	FSM	ENSG00000273802.3	ENST00000541790.4	489	1	51	-1218	51	1218	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCCAGCTACTTCGGAGA	7390	False	NA	NA	False	ACTAAA	-41	NA	26216637	26214981	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_26215000_26216600
H1_mix_00074893	chr6	-	3389	1	FSM	ENSG00000124575.7	ENST00000244534.7	776	1	12	-2625	12	2625	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACGGAAAAAAGGCAGATTA	5787	False	NA	NA	False	NA	NA	NA	26234975	26231586	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_26231600_26235000
H1_mix_00074894	chr6	-	594	1	FSM	ENSG00000277775.2	ENST00000618052.2	494	1	-98	-2	-98	2	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTTCAGTTGAAAGCGCC	1312	False	NA	2	True	NA	NA	NA	26250733	26250139	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_26250100_26250700
H1_mix_00074895	chr6	-	3139	1	FSM	ENSG00000273983.2	ENST00000614378.2	496	1	-1127	-1516	-1127	1516	mono-exon	FALSE	NA	NA	NA	NA	NA	246	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTTCAATAACAACATTGG	1	True	NA	NA	False	AATAAA	-20	NA	26272540	26269401	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_26269400_26272500
H1_mix_00074897	chr6	-	1034	2	FSM	ENSG00000158406.6	ENST00000634560.1	1034	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACCCTCCAATGGCTCT	-1	True	NA	-11	True	AATAAA	-31	NA	26285534	26281054	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_26281588_26285033
H1_mix_00074898	chr6	-	4811	4	FSM	ENSG00000181315.11	ENST00000415922.7	4811	4	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	9.10433352249844	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCGTCTCCACTGTACTG	0	True	NA	0	True	AATAAA	-22	NA	26659746	26634382	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_26638729_26643658_26643729_26658557_26658647_26659440
H1_mix_00074899	chr6	-	4729	3	FSM	ENSG00000181315.11	ENST00000456172.5	4718	3	0	-11	0	1	multi-exon	FALSE	canonical	1	1	junction_2	73.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCGTCTCCACTGTACTGA	-6	True	NA	1	True	AATAAA	-23	NA	26659752	26634381	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_26638729_26643658_26643729_26659440
H1_mix_00074900	chr6	-	1162	2	Intergenic	novelGene_1252	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	25	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTCTTCTCAATGTTGG	NA	False	NA	NA	False	NA	NA	NA	26779004	26777441	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_26778133_26778533
H1_mix_00074903	chr6	-	609	3	Intergenic	novelGene_1254	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	7.5	741	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTTCATCCCTTTTCTT	NA	False	NA	-8	True	AATAAA	-14	NA	27050392	26985903	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_26986084_26992350_26992609_27050221
H1_mix_00074904	chr6	-	931	1	FSM	ENSG00000287966.1	ENST00000661000.1	1346	1	-16	431	-16	-431	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACATGATGTTTTGATACA	2	True	NA	-23	True	AATAAA	-21	NA	27020296	27019365	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_27019400_27020300
H1_mix_00074908	chr6	-	727	1	FSM	ENSG00000124635.9	ENST00000339812.3	480	1	0	-247	0	247	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGTTAGTGATTTGGAACAG	-1	True	NA	NA	False	ATTAAA	-41	NA	27132795	27132068	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_27132100_27132800
H1_mix_00074909	chr6	-	841	2	Genic_Genomic	ENSG00000197903.8	novel	495	1	NA	NA	-4	8069	multi-exon	FALSE	canonical	3	75	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTTGTCAGTTGATTTT	-7	True	NA	-3	True	AATAAA	-22	NA	27146859	27138291	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr6_-_27138682_27146408
H1_mix_00074910	chr6	-	497	1	FSM	ENSG00000197903.8	ENST00000356950.2	495	1	0	-2	0	2	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCGATATTAGAGCTGTA	-3	True	NA	-2	True	NA	NA	NA	27146855	27146358	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_27146400_27146900
H1_mix_00074912	chr6	-	2413	1	FSM	ENSG00000204789.5	ENST00000416749.2	1603	1	-367	-443	-367	22	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTTATTACCCTTGCAT	NA	False	NA	1	True	AATAAA	-28	NA	27360221	27357808	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_27357800_27360200
H1_mix_00074913	chr6	-	3408	5	FSM	ENSG00000204789.5	ENST00000687798.1	4696	5	-20	1308	13	6	multi-exon	FALSE	canonical	3	55	junction_4	51.060625730596	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCACGTGTCATGTAGCTG	-16	True	NA	-15	True	AATAAA	-12	NA	27375251	27357824	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_27360222_27363178_27363303_27367516_27367613_27370135_27370225_27374549
H1_mix_00074915	chr6	-	3332	6	FSM	ENSG00000096654.16	ENST00000683788.1	3328	6	0	-4	0	0	multi-exon	TRUE	canonical	3	45	junction_5	11.0995495404093	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTGTTTTTAATATTCTA	-10	True	NA	0	True	ATTAAA	-22	NA	27473105	27450742	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_27453261_27456825_27456922_27457282_27457410_27467852_27467921_27472287_27472434_27472728
H1_mix_00074916	chr6	-	3101	6	FSM	ENSG00000096654.16	ENST00000211936.10	3101	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	25.1348363829964	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTGTTTTTAATATTCTA	-23	True	NA	0	True	ATTAAA	-22	NA	27473118	27450742	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_27453261_27456825_27456922_27457282_27457410_27467852_27467921_27472287_27472434_27472972
H1_mix_00074917	chr6	-	3336	6	FSM	ENSG00000096654.16	ENST00000377419.1	2899	6	-437	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	21.3297913726318	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCTCAAATTAACAATTCAA	-23	True	NA	-13	True	AATAAA	-16	NA	27473118	27450819	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_27453261_27456825_27456922_27457282_27457410_27467852_27467921_27472287_27472434_27472660
H1_mix_00074918	chr6	-	529	1	FSM	ENSG00000276368.2	ENST00000333151.5	476	1	0	-53	0	53	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACACTCATGATGTTTCGG	0	True	NA	-13	True	CATAAA	-43	NA	27814777	27814248	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_27814200_27814800
H1_mix_00074919	chr6	-	387	1	FSM	ENSG00000273542.2	ENST00000611927.2	387	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTCAGCTGAGGAGCCG	14	True	NA	NA	False	NA	NA	NA	27831560	27831173	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_27831200_27831600
H1_mix_00074921	chr6	-	5048	1	FSM	ENSG00000197153.5	ENST00000359303.4	512	1	-2342	-2194	-62	2194	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGACTTGTCCTTGGAT	18	False	NA	NA	False	AATAAA	-12	NA	27893168	27888120	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_27888100_27893200
H1_mix_00074922	chr6	-	2187	1	FSM	ENSG00000278677.2	ENST00000359611.4	487	1	5	-1705	5	1705	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCGACAGAATTAGAAGCC	6	True	NA	NA	False	NA	NA	NA	27893180	27890993	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_27891000_27893200
H1_mix_00074924	chr6	-	2802	2	FSM	ENSG00000269293.4	ENST00000667674.1	3533	2	0	731	0	-731	multi-exon	FALSE	canonical	3	68	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGGCTGAACACCAGA	-14	True	NA	NA	False	NA	NA	NA	28136847	28120512	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_28123212_28136744
H1_mix_00074926	chr6	-	5346	5	FSM	ENSG00000187626.9	ENST00000377294.3	5346	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	5.40832691319598	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTGACAGTATTGGTCT	-9	True	NA	NA	False	AATAAA	-27	NA	28252269	28241696	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_28245976_28246968_28247093_28248066_28248150_28249686_28249835_28251557
H1_mix_00074928	chr6	-	3046	4	FSM	ENSG00000235109.8	ENST00000439158.5	3050	4	4	0	4	0	multi-exon	FALSE	canonical	2	6	junction_3	6.23609564462324	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGCTTTGAAGTTTAT	15	True	NA	0	True	AATAAA	-30	NA	28336130	28324736	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_28326855_28327382_28327534_28329302_28329779_28335829
H1_mix_00074929	chr6	-	2812	4	FSM	ENSG00000235109.8	ENST00000344279.11	2812	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	4.08248290463863	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGCTTTGAAGTTTAT	-3	True	NA	0	True	AATAAA	-30	NA	28336148	28324736	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_28326855_28327382_28327534_28329302_28329779_28336081
H1_mix_00074932	chr6	-	11775	6	NNC	ENSG00000158691.15	novel	3909	6	NA	NA	-32	222	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	13.1605471010897	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTATACTATATTTTT	NA	False	NA	88	True	NA	NA	NA	28399779	28378732	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_28380872_28382190_28382610_28383263_28391743_28392901_28393047_28398003_28398474_28399656
H1_mix_00074934	chr6	-	9668	4	FSM	ENSG00000158691.15	ENST00000684592.1	7711	4	16	-1973	0	1973	multi-exon	FALSE	canonical	3	30	junction_1	5.71547606649408	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCTAATAATTTGCAGTCA	41	False	NA	NA	False	AATAAA	-35	NA	28399731	28382764	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_28391743_28392901_28393047_28398003_28398474_28399656
H1_mix_00074936	chr6	-	944	2	FSM	ENSG00000287804.2	ENST00000666335.1	987	2	0	43	0	-43	multi-exon	FALSE	canonical	3	5	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTATTTCTATAGTTTCA	1	True	NA	NA	False	NA	NA	NA	28489455	28477038	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_28477891_28489363
H1_mix_00074937	chr6	-	375	2	FSM	ENSG00000287804.2	ENST00000689665.1	413	2	38	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTGGTCTTTCTGGGTG	1	True	NA	0	True	ATTAAA	-18	NA	28489455	28485428	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_28485712_28489363
H1_mix_00074938	chr6	-	5939	4	FSM	ENSG00000232040.4	ENST00000452236.3	5935	4	1	-5	1	5	multi-exon	FALSE	canonical	3	22	junction_2	3.29983164553722	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTGTGTTTGTTTTA	-8	True	NA	NA	False	NA	NA	NA	28587297	28570529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_28573828_28574643_28576137_28579271_28579420_28586297
H1_mix_00074939	chr6	-	646	2	Intergenic	novelGene_1265	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGCATACCCAAAGAGCTCA	NA	False	NA	NA	False	AATAAA	-14	NA	28776296	28765810	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_28765899_28775738
H1_mix_00074942	chr6	-	541	2	FSM	ENSG00000204713.11	ENST00000467742.1	541	2	0	0	0	0	multi-exon	FALSE	canonical	3	610	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAAGTGGACCATAGGT	7707	False	NA	NA	False	NA	NA	NA	28907584	28904473	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_28904666_28907235
H1_mix_00074943	chr6	-	2919	7	FSM	ENSG00000197935.7	ENST00000377179.4	2782	7	0	-137	0	134	multi-exon	FALSE	canonical	3	13	junction_6	3.44802681092953	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGCTCAGGCTTTCCTAG	0	True	NA	NA	False	AGTAAA	-3	NA	29005315	28994650	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_28996587_28998733_28998839_28999486_28999614_28999955_29000048_29003512_29003595_29003945_29004215_29005007
H1_mix_00074947	chr6	-	6436	20	NIC	ENSG00000204681.11	novel	4299	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	25	junction_17	29.6919549434801	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGCAGTCTTCCTGTG	-5	True	NA	-3	True	AATAAA	-22	NA	29633135	29602229	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_29603717_29604493_29604638_29604859_29604989_29605568_29605697_29606390_29606485_29606896_29607005_29607101_29607219_29608600_29608734_29610923_29611002_29612550_29612615_29613242_29613486_29621100_29621293_29621751_29621818_29622103_29622206_29623304_29623476_29623889_29624025_29627485_29627647_29629086_29631600_29632300_29632386_29632849
H1_mix_00074948	chr6	-	4299	22	FSM	ENSG00000204681.11	ENST00000377016.8	4299	22	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	40.4317402987154	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGCAGTCTTCCTGTG	-5	True	NA	-3	True	AATAAA	-22	NA	29633135	29602229	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_29603717_29604493_29604638_29604859_29604989_29605568_29605697_29606390_29606485_29606896_29607005_29607101_29607219_29608600_29608734_29609228_29609380_29610923_29611002_29612550_29612615_29613242_29613486_29621100_29621293_29621751_29621818_29622103_29622206_29623304_29623476_29623889_29624025_29627485_29627647_29629086_29629108_29631395_29631600_29632300_29632386_29632849
H1_mix_00074952	chr6	-	284	1	FSM	ENSG00000235238.1	ENST00000445436.1	284	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGGAACCTGCTTCTTTA	98	False	NA	NA	False	NA	NA	NA	29636343	29636059	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_29636100_29636300
H1_mix_00074955	chr6	-	390	1	FSM	ENSG00000235821.1	ENST00000441380.1	420	1	196	-166	196	166	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATGTACTGGTC	NA	False	NA	NA	False	AATAAA	-22	NA	29750952	29750562	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_29750600_29751000
H1_mix_00074960	chr6	-	3860	4	NNC	ENSG00000204623.10	novel	1706	4	NA	NA	3	359	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	9.46337971105226	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTTGAAAGAAAGGACATT	6	True	NA	NA	False	AATAGA	-4	NA	30061157	30054241	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_30057718_30058114_30058191_30060740_30060996_30061104
H1_mix_00074961	chr6	-	3395	10	NIC	ENSG00000234127.9	novel	3518	10	NA	NA	0	9	combination_of_known_junctions	TRUE	canonical	3	88	junction_8	15.8402518997304	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTATTTGTAGGTCTA	20	True	NA	NA	False	AATAAA	-25	NA	30213385	30184445	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_30186559_30189166_30189200_30189417_30189534_30190012_30190036_30196515_30196747_30198428_30198525_30198665_30199154_30201034_30201139_30204655_30204766_30213304
H1_mix_00074962	chr6	-	3319	9	FSM	ENSG00000234127.9	ENST00000453195.5	3318	9	8	-9	0	9	multi-exon	FALSE	canonical	3	36	junction_8	31.0199028850833	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTATTTGTAGGTCTA	-14	True	NA	NA	False	AATAAA	-25	NA	30213419	30184445	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30186559_30189166_30189200_30189417_30189534_30190012_30190036_30196515_30196747_30198428_30198525_30198665_30199154_30201034_30201139_30213304
H1_mix_00074963	chr6	-	1124	6	FSM	ENSG00000234127.9	ENST00000416596.5	1124	6	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_4	16.5093912667912	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGCAGAGCTCATGCAG	-14	True	NA	NA	False	NA	NA	NA	30213419	30196535	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30196747_30198428_30198525_30198665_30199154_30201034_30201139_30204655_30204766_30213304
H1_mix_00074964	chr6	-	603	3	FSM	ENSG00000234127.9	ENST00000418026.1	603	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	53	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGACAGAGACAAAATTCAG	20	True	NA	NA	False	NA	NA	NA	30213385	30198490	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30198525_30198665_30199154_30213304
H1_mix_00074965	chr6	-	323	2	FSM	ENSG00000270604.5	ENST00000455957.5	350	2	27	0	27	0	multi-exon	FALSE	canonical	2	3	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGCATGTGTATAATTA	NA	False	NA	-4	True	AATAAA	-14	NA	30234450	30234038	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30234269_30234357
H1_mix_00074966	chr6	-	11373	4	FSM	ENSG00000280128.1_ENSG00000231074.10	ENST00000659132.1	7230	4	277	-4420	0	66	multi-exon	FALSE	canonical	3	128	junction_3	65.4335965353851	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCCTACATGAAAAAAGAGG	10	True	NA	NA	False	NA	NA	NA	30326809	30282282	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30292600_30294470_30294965_30296131_30296238_30326353
H1_mix_00074967	chr6	-	3706	1	FSM	ENSG00000280128.1	ENST00000624252.1	3706	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAACATACCAAAACCTAT	NA	False	NA	NA	False	GATAAA	-6	NA	30286054	30282348	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30282300_30286100
H1_mix_00074968	chr6	-	3898	4	FSM	ENSG00000231074.10	ENST00000665953.1	3898	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	111.955348242056	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	21	True	NA	NA	False	NA	NA	NA	30326846	30286689	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30289495_30294470_30294965_30296131_30296238_30326353
H1_mix_00074969	chr6	-	3817	5	FSM	ENSG00000231074.10	ENST00000670071.1	3812	5	0	-5	0	0	multi-exon	FALSE	canonical	3	14	junction_1	115.456701840993	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCTAGCCTGGTGAAGGA	8	True	NA	NA	False	NA	NA	NA	30326386	30286727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30289495_30294470_30294965_30296131_30296238_30314268_30314483_30326150
H1_mix_00074971	chr6	-	8683	3	FSM	ENSG00000231074.10	ENST00000426882.6	5050	3	-212	-3421	0	0	multi-exon	FALSE	canonical	3	128	junction_2	79.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAACCCACTCCAT	2057	False	NA	NA	False	TTTAAA	-13	NA	30327362	30287396	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30294965_30296131_30296238_30326353
H1_mix_00074973	chr6	-	4518	3	FSM	ENSG00000231074.10	ENST00000449544.6	4518	3	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	112	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTATCCAAAGTTTGTCAC	-1	True	NA	-25	True	NA	NA	NA	30326395	30290797	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30294965_30296131_30296238_30326150
H1_mix_00074974	chr6	-	4605	4	FSM	ENSG00000231074.10	ENST00000444126.5	4605	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	125.305848050103	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATTGGGGATTTTTTAAA	3085	False	NA	NA	False	NA	NA	NA	30326334	30291005	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30294965_30296131_30296238_30314268_30314483_30326008
H1_mix_00074975	chr6	-	2313	4	NIC	ENSG00000231074.10	novel	6734	4	NA	NA	6	-8	combination_of_known_junctions	FALSE	canonical	3	39	junction_3	102.042474816454	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCAAATACTTTATTGTA	3091	False	NA	NA	False	NA	NA	NA	30326328	30291206	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_30292600_30294470_30294965_30296131_30296238_30326008
H1_mix_00074978	chr6	-	4254	1	FSM	ENSG00000231074.10	ENST00000602319.1	3342	1	-889	-23	-889	23	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGCAGTGTTAAGGGAAA	6042	False	NA	NA	False	GATAAA	-26	NA	30305004	30300750	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30300800_30305000
H1_mix_00074980	chr6	-	6801	12	FSM	ENSG00000204590.13	ENST00000376621.8	6801	12	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_5	38.8429769650079	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTTTGGATATGTTTCT	-3	True	NA	NA	False	AATAAA	-32	NA	30556489	30541380	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30546314_30546695_30546837_30547111_30547275_30547351_30547531_30552466_30552662_30553083_30553180_30553349_30553558_30554574_30554647_30554763_30554916_30555054_30555192_30555554_30555721_30556130
H1_mix_00074981	chr6	-	2666	13	NNC	ENSG00000204590.13	novel	6801	12	NA	NA	-581	537	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_12	136.618080794601	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGAGGTGAGAGCGGCTG	452	False	NA	-5	True	AATAAA	-33	NA	30557070	30545947	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_30546314_30546695_30546837_30547111_30547275_30547351_30547531_30552466_30552662_30553083_30553180_30553349_30553558_30554574_30554647_30554763_30554916_30555054_30555192_30555554_30555721_30556130_30556804_30556952
H1_mix_00074983	chr6	-	4511	20	FSM	ENSG00000204569.10	ENST00000376511.7	4511	20	0	0	0	0	multi-exon	TRUE	canonical	3	161	junction_19	25.5334227762429	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCTTATTTAACCCCTAG	-2	True	NA	-13	True	AATAAA	-15	NA	30617243	30600412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30601659_30601935_30602692_30602845_30602960_30603209_30603286_30603471_30603667_30603779_30603844_30604007_30604255_30604352_30604512_30604587_30604736_30604993_30605095_30605922_30606036_30606137_30606244_30606467_30606642_30606778_30606857_30607839_30607892_30608778_30608915_30609076_30609164_30609837_30609956_30616477_30616999_30617223
H1_mix_00074985	chr6	-	3414	20	FSM	ENSG00000204560.10	ENST00000376442.8	3406	20	0	-8	0	0	multi-exon	FALSE	canonical	3	180	junction_8	34.9078724185062	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGAAATTCTATCTCAT	1	True	NA	-6	True	AATAAA	-35	NA	30673006	30653118	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30653371_30654705_30654880_30655174_30655337_30655434_30655598_30656197_30656266_30656390_30656510_30656596_30656760_30656951_30657093_30659471_30659625_30659735_30659835_30660031_30660243_30662626_30662743_30662910_30663022_30664800_30664993_30665070_30665275_30665478_30665734_30670409_30670467_30670789_30670953_30671035_30671275_30672634
H1_mix_00074987	chr6	-	4027	3	FSM	ENSG00000146112.12	ENST00000615527.1	4597	3	567	3	-112	-3	multi-exon	FALSE	canonical	3	34	junction_2	5	311	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAACTCGTCTGCTTCTCC	4096	False	NA	-8	True	AATAAA	-12	NA	30687328	30676393	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30677289_30679178_30679390_30684407
H1_mix_00074989	chr6	-	1040	2	FSM	ENSG00000137404.15	ENST00000474864.5	1029	2	0	-11	0	11	multi-exon	FALSE	canonical	2	6	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCAGTGTCTCCCAAGCT	14	True	NA	7	True	AATAAA	-32	NA	30690974	30688035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30688943_30690841
H1_mix_00074990	chr6	-	1424	4	FSM	ENSG00000137404.15	ENST00000376421.7	1411	4	0	-13	0	11	multi-exon	FALSE	canonical	3	77	junction_3	10.6562449087639	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCAGTGTCTCCCAAGCT	4	True	NA	7	True	AATAAA	-32	NA	30690984	30688035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30688943_30689275_30689453_30690046_30690244_30690841
H1_mix_00074991	chr6	-	1464	4	FSM	ENSG00000137404.15	ENST00000470733.1	1453	4	0	-11	0	11	multi-exon	FALSE	canonical	3	21	junction_2	27.9205221218292	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCAGTGTCTCCCAAGCT	-14	True	NA	7	True	AATAAA	-32	NA	30691002	30688035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30688943_30689275_30689453_30690024_30690244_30690841
H1_mix_00074992	chr6	-	1647	3	FSM	ENSG00000137404.15	ENST00000376420.9	1228	3	-419	0	25	0	multi-exon	FALSE	canonical	3	8	junction_1	34.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATGCAGTCTGTCAGTG	29	False	NA	-4	True	AATAAA	-21	NA	30691395	30688046	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30688943_30690046_30690244_30690841
H1_mix_00074993	chr6	-	204	1	FSM	ENSG00000230449.1	ENST00000430239.1	730	1	-133	659	-133	-659	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAGGCCCGAGAAAGAAAT	NA	False	NA	NA	False	AAAAAG	-27	NA	30697668	30697464	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30697500_30697700
H1_mix_00074995	chr6	-	6170	14	NIC	ENSG00000137337.16	novel	6968	15	NA	NA	3	0	intron_retention	FALSE	canonical	3	36	junction_8	72.4839912952014	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTAGTGTAGTTTTTTA	21	True	NA	-19	True	AATAAA	-19	NA	30717278	30699806	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_30700633_30702552_30702664_30702751_30702878_30703103_30703287_30703417_30703538_30703620_30706099_30707383_30707455_30711411_30711502_30711666_30711727_30711873_30713355_30713647_30713718_30713802_30714184_30715039_30715179_30717244
H1_mix_00074996	chr6	-	4464	5	FSM	ENSG00000137337.16	ENST00000489540.1	1402	5	-2554	-508	1050	0	multi-exon	FALSE	canonical	3	224	junction_3	16.2692194035239	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTAGTGTAGTTTTTTA	6705	False	NA	-19	True	AATAAA	-19	NA	30706635	30699806	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30700633_30702552_30702664_30702751_30702878_30703103_30703287_30703417
H1_mix_00074997	chr6	-	6040	15	NNC	ENSG00000137337.16	novel	6968	15	NA	NA	16	0	intron_retention	FALSE	canonical	3	28	junction_7	69.1995045399274	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGATTTGGAAGCCACAG	6308	False	NA	-35	True	AATAAA	-10	NA	30717431	30700314	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_30700633_30702552_30702664_30702751_30702878_30703103_30703287_30703417_30703538_30703620_30706099_30707383_30707455_30708135_30708358_30711411_30711505_30711666_30711727_30711873_30713355_30713647_30713718_30713802_30714184_30715039_30715179_30717244
H1_mix_00075000	chr6	-	845	1	FSM	ENSG00000272540.1	ENST00000607476.1	773	1	0	-72	0	72	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACCAAATACAAAGTTGTC	7096	False	NA	NA	False	NA	NA	NA	30723877	30723032	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30723000_30723900
H1_mix_00075007	chr6	-	1238	2	FSM	ENSG00000137331.12	ENST00000259874.6	1237	2	0	-1	0	1	multi-exon	FALSE	canonical	3	69	junction_1	0	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAGTGTATCTTTGCAA	-2	True	NA	-18	True	AATAAA	-20	NA	30744547	30743197	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30744197_30744308
H1_mix_00075008	chr6	-	2673	4	NNC	ENSG00000237923.1	novel	799	3	NA	NA	-146	2087	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	60.6025302002042	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTACTGACGAGCAATGT	NA	False	NA	NA	False	AATAAA	-23	NA	30848305	30837438	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_30839464_30839822_30840020_30847036_30847150_30847967
H1_mix_00075009	chr6	-	1221	5	NNC	ENSG00000237923.1	novel	799	3	NA	NA	-146	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	74.4525855830407	289	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAGGAGTTCGAGACCAG	NA	False	NA	NA	False	NA	NA	NA	30848305	30839525	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_30840020_30843377_30843615_30844315_30844355_30847036_30847150_30847967
H1_mix_00075011	chr6	-	2961	18	FSM	ENSG00000204536.15	ENST00000396268.8	2971	18	13	-3	-1	3	multi-exon	TRUE	canonical	3	34	junction_17	29.7074548215144	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTTGGAAATGTTATTT	8969	False	NA	-9	True	AATAAA	-20	NA	31157789	31142435	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31142717_31142962_31143135_31143261_31143414_31144686_31144789_31144884_31145074_31145165_31145303_31145447_31145494_31145695_31145809_31148404_31148512_31148617_31148729_31150065_31150216_31150454_31150566_31150724_31150861_31150958_31151123_31154495_31154800_31156730_31156945_31157022_31157090_31157384
H1_mix_00075012	chr6	-	2601	18	FSM	ENSG00000204536.15	ENST00000376266.9	2625	18	27	-3	-2	3	multi-exon	FALSE	canonical	3	72	junction_17	23.359385686571	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTTGGAAATGTTATTT	-31	True	NA	-9	True	AATAAA	-20	NA	31158211	31142435	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31142717_31142962_31143135_31143261_31143414_31144686_31144789_31144884_31145074_31145165_31145303_31145447_31145494_31145695_31145809_31148404_31148512_31148617_31148729_31150065_31150216_31150454_31150566_31150724_31150861_31150958_31151123_31154495_31154800_31156730_31156945_31157022_31157090_31158166
H1_mix_00075013	chr6	-	1384	5	NNC	ENSG00000204531.21	novel	1409	5	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	1702.76319551487	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTTGTCCTTCAGTT	0	True	NA	-5	True	AATAAA	-33	NA	31170653	31164336	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_31164868_31165127_31165287_31165570_31165702_31165926_31166048_31170211
H1_mix_00075014	chr6	-	1409	5	FSM	ENSG00000204531.21	ENST00000259915.13	1409	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1707.84820754071	1557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTTGTCCTTCAGTT	-2	True	NA	-5	True	AATAAA	-33	NA	31170682	31164336	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31164868_31165127_31165287_31165570_31165702_31165926_31166048_31170215
H1_mix_00075016	chr6	-	2280	3	FSM	ENSG00000204531.21	ENST00000513407.1	2276	3	0	-4	0	0	multi-exon	FALSE	canonical	3	3665	junction_2	379.5	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACACTTATCTTGGTTTG	3510	False	NA	-15	True	AATAAA	-23	NA	31167170	31164346	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31164868_31165127_31165287_31165570
H1_mix_00075017	chr6	-	1285	4	FSM	ENSG00000204525.18	ENST00000470363.5	1279	4	0	-6	0	6	multi-exon	FALSE	canonical	3	646	junction_3	151.001839576727	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCGCTGTGCTGAGTCTG	2666	False	NA	-4	True	AATAAA	-27	NA	31270422	31268742	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31269174_31269337_31269386_31269492_31270086_31270209
H1_mix_00075018	chr6	-	1550	8	FSM	ENSG00000204525.18	ENST00000376228.10	1542	8	6	-14	0	14	multi-exon	FALSE	canonical	3	558	junction_7	145.034408303122	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGAGTCTGTTGCAGGT	1	True	NA	4	True	AATAAA	-35	NA	31272086	31268734	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31269174_31269337_31269386_31269492_31269526_31269965_31270086_31270209_31270486_31271072_31271349_31271598_31271869_31271998
H1_mix_00075019	chr6	-	1073	3	FSM	ENSG00000204525.18	ENST00000495835.1	1073	3	0	0	0	0	multi-exon	FALSE	canonical	3	856	junction_2	15.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGCTGGGGTAAGGAGG	-6	True	NA	NA	False	GGGGCT	-16	NA	31272130	31270220	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31270486_31271072_31271349_31271598
H1_mix_00075020	chr6	-	931	3	FSM	ENSG00000234745.13	ENST00000497377.5	917	3	0	-14	0	14	multi-exon	FALSE	canonical	3	682	junction_2	18.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGAGTCTGTTGCAGGT	2135	False	NA	8	True	AATAAA	-35	NA	31355076	31353857	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31354297_31354478_31354527_31354632
H1_mix_00075021	chr6	-	1553	8	FSM	ENSG00000234745.13	ENST00000412585.7	1536	8	0	-17	0	14	multi-exon	FALSE	canonical	3	419	junction_7	122.365961653675	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGAGTCTGTTGCAGGT	-3	True	NA	8	True	AATAAA	-35	NA	31357179	31353857	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31354297_31354478_31354527_31354632_31354666_31355106_31355224_31355316_31355593_31356166_31356443_31356687_31356958_31357085
H1_mix_00075025	chr6	-	979	4	FSM	ENSG00000198563.14	ENST00000474961.5	974	4	0	-5	0	5	multi-exon	FALSE	canonical	3	1563	junction_3	134.345326180953	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTCCCTTTATTGTATTTG	10008	False	NA	3	True	ACTAAA	-37	NA	31531744	31530213	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31530451_31530778_31530927_31531052_31531198_31531295
H1_mix_00075026	chr6	-	862	6	FSM	ENSG00000198563.14	ENST00000484566.5	857	6	0	-5	0	5	multi-exon	FALSE	canonical	3	97	junction_3	625.291164178737	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTCCCTTTATTGTATTTG	9961	False	NA	3	True	ACTAAA	-37	NA	31535475	31530213	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31530451_31530778_31530927_31531052_31531179_31531295_31531406_31532779_31532912_31535366
H1_mix_00075027	chr6	-	4032	10	FSM	ENSG00000198563.14	ENST00000462256.5	4027	10	0	-5	0	5	multi-exon	FALSE	canonical	3	511	junction_9	355.807931264351	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTCCCTTTATTGTATTTG	5514	False	NA	3	True	ACTAAA	-37	NA	31542017	31530213	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31530451_31530778_31530927_31531052_31531198_31531295_31531406_31532779_31535486_31536499_31536684_31538762_31538856_31539146_31539275_31540321_31540535_31541949
H1_mix_00075034	chr6	-	5158	5	FSM	ENSG00000198563.14	ENST00000481456.1	5158	5	0	0	0	0	multi-exon	FALSE	canonical	3	1317	junction_3	67.0312427156173	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATTAGCCAGGTGTG	-5	True	NA	NA	False	NA	NA	NA	31542001	31532412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31535486_31536499_31536684_31538762_31538856_31539146_31539275_31540321
H1_mix_00075038	chr6	-	1633	3	FSM	ENSG00000213760.11	ENST00000303892.10	1370	3	-266	3	-26	-3	multi-exon	FALSE	canonical	3	29	junction_2	1.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCCTTTTGCCTCATCA	657	False	NA	-3	True	AATAAA	-35	NA	31546874	31544446	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31545582_31546108_31546210_31546477
H1_mix_00075042	chr6	-	2463	17	ISM	ENSG00000204463.14	ENST00000676615.2	3843	26	7476	0	0	0	3prime_fragment	TRUE	canonical	3	122	junction_14	87.7820454307144	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	7501	False	NA	-13	True	AATAAA	-31	NA	31645185	31639027	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644306_31644415_31644524_31644603_31644945
H1_mix_00075043	chr6	-	3566	25	NIC	ENSG00000204463.14	novel	3644	25	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_24	84.5950217703934	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	13	True	NA	-13	True	AATAAA	-31	NA	31651970	31639027	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31651901
H1_mix_00075044	chr6	-	3547	25	NIC	ENSG00000204463.14	novel	3843	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_24	96.3719645724604	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	10	True	NA	-13	True	AATAAA	-31	NA	31652323	31639027	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_31639227_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644306_31644415_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652234
H1_mix_00075045	chr6	-	3482	24	NIC	ENSG00000204463.14	novel	3644	25	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	124	junction_23	74.2825546181936	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	17	True	NA	-13	True	AATAAA	-31	NA	31652378	31639027	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_31639227_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652246
H1_mix_00075048	chr6	-	3630	25	NIC	ENSG00000204463.14	novel	3779	25	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_24	79.8595011915023	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	2	True	NA	-13	True	AATAAA	-31	NA	31652645	31639027	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652512
H1_mix_00075049	chr6	-	3627	25	NIC	ENSG00000204463.14	novel	3779	25	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_24	96.0357915773535	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	2	True	NA	-13	True	AATAAA	-31	NA	31652645	31639027	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643975_31644081_31644195_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652512
H1_mix_00075050	chr6	-	3627	24	FSM	ENSG00000204463.14	ENST00000362049.10	3626	24	0	-1	0	0	multi-exon	FALSE	canonical	3	112	junction_23	75.6064829538465	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	8062	False	NA	-13	True	AATAAA	-31	NA	31652700	31639027	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31639227_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652423
H1_mix_00075051	chr6	-	3920	26	FSM	ENSG00000204463.14	ENST00000676571.1	3920	26	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_14	94.8822090805226	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	8057	False	NA	-13	True	AATAAA	-31	NA	31652705	31639027	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644228_31644306_31644415_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652423
H1_mix_00075055	chr6	-	2510	1	FSM	ENSG00000204439.4	ENST00000375911.2	2481	1	-71	42	-71	-42	mono-exon	FALSE	NA	NA	NA	NA	NA	232	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAGAGTTACTGCCACTC	7753	False	NA	-12	True	AATAAA	-39	NA	31660849	31658339	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31658300_31660800
H1_mix_00075057	chr6	-	1993	4	FSM	ENSG00000204438.11	ENST00000375900.8	1814	4	-179	0	-179	0	multi-exon	FALSE	canonical	3	41	junction_3	65.1272259163213	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAGCTATTTTGAGGAA	2562	False	NA	-8	True	AATAAA	-28	NA	31666040	31662075	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31662711_31663852_31664581_31664840_31665004_31665573
H1_mix_00075059	chr6	-	2144	4	NNC	ENSG00000204438.11	novel	1800	4	NA	NA	-5	-4	intron_retention	FALSE	canonical	1	1	junction_3	80.452884762864	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGGAAGCTATTTTGA	4	True	NA	-12	True	AATAAA	-24	NA	31665855	31662079	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_31662711_31663852_31664578_31664840_31665347_31665573
H1_mix_00075060	chr6	-	1699	3	ISM	ENSG00000204438.11	ENST00000375893.6	1598	4	449	5	4	-5	3prime_fragment	FALSE	canonical	3	95	junction_2	51.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGGAAGCTATTTTG	3421	False	NA	-13	True	AATAAA	-23	NA	31665181	31662080	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_31662711_31663852_31664581_31664840
H1_mix_00075061	chr6	-	852	3	FSM	ENSG00000204428.12	ENST00000474395.5	836	3	0	-16	0	0	multi-exon	FALSE	canonical	2	7	junction_2	4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTATGTCTCTTTCTTCTG	-16	True	NA	-1	True	AATAAA	-18	NA	31681476	31676683	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31677121_31679100_31679269_31681229
H1_mix_00075062	chr6	-	1977	20	FSM	ENSG00000204427.12	ENST00000395952.8	1977	20	0	0	0	0	multi-exon	TRUE	canonical	3	224	junction_17	23.2023496756452	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTAATTGTATAACTTCTC	-1	True	NA	-4	True	AATAAA	-22	NA	31703324	31686954	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31687296_31687497_31687545_31687641_31687741_31687823_31687901_31688040_31688104_31688248_31688306_31688722_31688787_31689014_31689120_31689580_31689705_31690077_31690128_31690538_31690603_31691578_31691681_31691803_31691919_31693026_31693150_31693358_31693433_31696947_31697034_31700941_31701029_31701273_31701341_31702073_31702131_31703149
H1_mix_00075063	chr6	-	1892	19	FSM	ENSG00000204427.12	ENST00000495769.5	1892	19	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_17	61.8619779912319	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATTAATAAAAAGGTAT	-17	True	NA	-38	True	NA	NA	NA	31703340	31686988	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31687296_31687497_31687545_31687641_31687741_31687823_31687901_31688040_31688104_31688248_31688306_31688722_31688787_31689014_31689120_31689580_31689705_31690077_31690128_31690538_31690603_31691578_31691681_31691803_31691919_31693026_31693150_31693358_31693433_31696947_31697034_31700941_31701029_31702073_31702131_31703149
H1_mix_00075070	chr6	-	1782	7	FSM	ENSG00000213722.10	ENST00000375787.6	1330	7	1	-453	0	453	multi-exon	FALSE	canonical	3	53	junction_6	222.505992428668	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAGGCTGTTTCTATGAG	-25	True	NA	NA	False	AATACA	-21	NA	31730262	31726584	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31727354_31727542_31727693_31728172_31728293_31728450_31728525_31728645_31728746_31728864_31729222_31730050
H1_mix_00075071	chr6	-	724	6	FSM	ENSG00000213722.10	ENST00000437288.5	724	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	258.485280045112	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTGTGACTGGTGTCT	9177	False	NA	-5	True	AATAAA	-20	NA	31728877	31727037	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31727354_31727542_31727644_31728172_31728293_31728450_31728525_31728645_31728746_31728864
H1_mix_00075072	chr6	-	1261	7	FSM	ENSG00000213722.10	ENST00000436437.2	1261	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	241.668793094093	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTGTGACTGGTGTCT	3	True	NA	-5	True	AATAAA	-20	NA	31729501	31727037	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31727354_31727542_31727693_31728172_31728293_31728450_31728525_31728645_31728746_31728864_31729226_31729361
H1_mix_00075073	chr6	-	1235	7	FSM	ENSG00000213722.10	ENST00000416410.6	1235	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	231.714383575029	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTGTGACTGGTGTCT	7	True	NA	-5	True	AATAAA	-20	NA	31729796	31727037	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31727354_31727542_31727693_31728172_31728293_31728450_31728525_31728645_31728746_31728864_31729226_31729682
H1_mix_00075074	chr6	-	898	5	FSM	ENSG00000213722.10	ENST00000483792.1	898	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	310.52576382645	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTGTGACTGGTGTCT	-25	True	NA	-5	True	AATAAA	-20	NA	31730262	31727037	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31727354_31727542_31727693_31728172_31728293_31728645_31728746_31730050
H1_mix_00075075	chr6	-	1688	7	FSM	ENSG00000213722.10	ENST00000375792.7	1688	7	0	0	0	0	multi-exon	FALSE	canonical	3	557	junction_6	47.0841445357847	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTGTGACTGGTGTCT	7437	False	NA	-5	True	AATAAA	-20	NA	31730617	31727037	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31727354_31727542_31727693_31728172_31728293_31728450_31728525_31728645_31728746_31728864_31729226_31730050
H1_mix_00075076	chr6	-	1122	7	FSM	ENSG00000213719.8	ENST00000616760.1	1098	7	-22	-2	0	0	multi-exon	FALSE	canonical	3	105	junction_6	1084.24705056858	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGATTTAAAGTGTGGGC	1487	False	NA	-5	True	AATAAA	-33	NA	31736567	31730580	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31731004_31732216_31732399_31733565_31733673_31733835_31733962_31734153_31734264_31736261_31736351_31736482
H1_mix_00075078	chr6	-	4331	31	NNC	ENSG00000204394.13	novel	4111	30	NA	NA	-188	4938	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	164.275459721368	466	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAGAAAAAAAAAAGAAAA	29	False	NA	NA	False	AAAAAG	-43	NA	31795940	31772579	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_31772612_31777517_31777663_31778966_31779293_31779424_31779537_31779607_31779815_31779997_31780154_31780440_31780569_31780704_31780784_31780869_31780939_31781018_31781124_31781480_31781607_31781690_31781762_31781846_31781953_31782086_31782178_31782284_31782444_31782529_31782634_31782720_31782846_31783095_31783187_31784213_31784309_31784393_31784503_31784594_31784715_31785245_31785328_31785568_31785734_31791609_31791738_31791870_31791972_31792216_31792302_31792391_31792517_31792756_31792896_31792985_31793121_31794830_31795251_31795545
H1_mix_00075079	chr6	-	4339	31	NNC	ENSG00000204394.13	novel	4111	30	NA	NA	-198	4938	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	164.275459721368	1020	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAGAAAAAAAAAAGAAAA	0	True	NA	NA	False	AAAAAG	-43	NA	31795950	31772579	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_31772610_31777517_31777663_31778966_31779293_31779424_31779537_31779607_31779815_31779997_31780154_31780440_31780569_31780704_31780784_31780869_31780939_31781018_31781124_31781480_31781607_31781690_31781762_31781846_31781953_31782086_31782178_31782284_31782444_31782529_31782634_31782720_31782846_31783095_31783187_31784213_31784309_31784393_31784503_31784594_31784715_31785245_31785328_31785568_31785734_31791609_31791738_31791870_31791972_31792216_31792302_31792391_31792517_31792756_31792896_31792985_31793121_31794830_31795251_31795545
H1_mix_00075081	chr6	-	4309	30	NNC	ENSG00000204394.13	novel	4111	30	NA	NA	-195	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_25	153.702269448988	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCTTGTCGTCTGTGGTG	3	True	NA	-1	True	AATAAA	-17	NA	31795947	31777517	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_31777663_31778966_31779293_31779424_31779537_31779607_31779815_31779997_31780154_31780440_31780569_31780704_31780784_31780869_31780939_31781018_31781124_31781480_31781607_31781690_31781762_31781846_31781953_31782086_31782178_31782284_31782444_31782529_31782634_31782720_31782846_31783095_31783187_31784213_31784309_31784393_31784503_31784594_31784715_31785245_31785328_31785568_31785734_31791609_31791738_31791870_31791972_31792216_31792305_31792391_31792517_31792756_31792896_31792985_31793121_31794830_31795251_31795545
H1_mix_00075084	chr6	-	820	5	FSM	ENSG00000204392.11	ENST00000491421.5	820	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	424.092265904485	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTGGTTCTGTTA	8948	False	NA	-6	True	AATAAA	-15	NA	31806659	31797395	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31797883_31797989_31798050_31798476_31798508_31806074_31806143_31806485
H1_mix_00075086	chr6	-	858	5	FSM	ENSG00000204392.11	ENST00000375661.6	858	5	0	0	0	0	multi-exon	FALSE	canonical	3	925	junction_3	61.9213210453395	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTGGTTCTGTTA	-2	True	NA	-6	True	AATAAA	-15	NA	31806966	31797395	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31797883_31797989_31798050_31798476_31798508_31806074_31806143_31806754
H1_mix_00075087	chr6	-	1960	6	FSM	ENSG00000204386.12	ENST00000375631.5	3353	6	0	1393	0	0	multi-exon	FALSE	canonical	3	251	junction_2	34.6444800798049	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCCCTCTTTTTTTGTTG	7	True	NA	-4	True	NA	NA	NA	31862821	31859051	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31859946_31860041_31860265_31860438_31860622_31861187_31861451_31861998_31862192_31862617
H1_mix_00075089	chr6	-	2473	20	FSM	ENSG00000204385.13	ENST00000375562.8	2505	20	35	-3	-14	0	multi-exon	FALSE	non_canonical	0	0	junction_9	3.97777760582972	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGACTCATTCTCTCCA	2176	False	NA	-22	True	ATTAAA	-23	NA	31879011	31863191	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31863749_31864651_31864737_31864815_31864911_31865009_31865081_31865314_31865389_31865497_31865602_31865689_31865785_31865872_31866127_31869154_31869258_31869544_31869638_31870602_31870703_31870811_31871048_31871313_31871398_31871473_31871562_31874459_31874521_31874928_31875029_31875851_31875931_31876055_31876130_31877033_31877083_31878940
H1_mix_00075091	chr6	-	4133	27	FSM	ENSG00000204371.11	ENST00000395728.7	4129	27	0	-4	0	4	multi-exon	FALSE	canonical	3	568	junction_19	121.043643407936	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTTGTGTTGGGGTGGG	18	True	NA	NA	False	AATAAA	-24	NA	31897202	31879754	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31880265_31880672_31880849_31881013_31881093_31882698_31882786_31882893_31883010_31883361_31883440_31883805_31883951_31884391_31884560_31884644_31884800_31884911_31885017_31886580_31886683_31886774_31886898_31886994_31887102_31887576_31887660_31887778_31887962_31888040_31888277_31888362_31888507_31888598_31888748_31888968_31889071_31889227_31889343_31889467_31889603_31892406_31892563_31892693_31892735_31892825_31892911_31896262_31896517_31896605_31896825_31896922
H1_mix_00075092	chr6	-	4051	26	FSM	ENSG00000204371.11	ENST00000375528.8	4047	26	0	-4	0	4	multi-exon	FALSE	canonical	3	274	junction_18	158.854177156284	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTTGTGTTGGGGTGGG	-2	True	NA	NA	False	AATAAA	-24	NA	31897222	31879754	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31880265_31880672_31880849_31881013_31881093_31882698_31882786_31882893_31883010_31883361_31883440_31883805_31883951_31884391_31884560_31884644_31884800_31884911_31885017_31886580_31886683_31886774_31886898_31886994_31887102_31887576_31887660_31887778_31887962_31888040_31888277_31888362_31888507_31888598_31888748_31889227_31889343_31889467_31889603_31892406_31892563_31892693_31892735_31892825_31892911_31896262_31896517_31896605_31896825_31896922
H1_mix_00075093	chr6	-	4521	27	NIC	ENSG00000204371.11	novel	4129	27	NA	NA	104	0	intron_retention	FALSE	canonical	3	88	junction_9	189.508774054889	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGATTTTTGTGTTGGGG	3	True	NA	NA	False	AATAAA	-20	NA	31897573	31879758	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_31880265_31880672_31880849_31881013_31881093_31882698_31882786_31882893_31883010_31883361_31883440_31883805_31883951_31884391_31884560_31884644_31884800_31884890_31885017_31886580_31886683_31886774_31886898_31886994_31887102_31887576_31887660_31887778_31887962_31888040_31888277_31888362_31888507_31888598_31888748_31888968_31889071_31889227_31889343_31889467_31889603_31892406_31892563_31892693_31892735_31892825_31892911_31896262_31896517_31896605_31896825_31896922
H1_mix_00075094	chr6	-	3860	27	FSM	ENSG00000204371.11	ENST00000375530.8	3856	27	0	-4	0	4	multi-exon	FALSE	canonical	3	274	junction_18	156.696749493329	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTTGTGTTGGGGTGGG	14	True	NA	NA	False	AATAAA	-24	NA	31897677	31879754	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31880265_31880672_31880849_31881013_31881093_31882698_31882786_31882893_31883010_31883361_31883440_31883805_31883951_31884391_31884560_31884644_31884800_31884911_31885017_31886580_31886683_31886774_31886898_31886994_31887102_31887576_31887660_31887778_31887962_31888040_31888277_31888362_31888507_31888598_31888748_31889227_31889343_31889467_31889603_31892406_31892563_31892693_31892735_31892825_31892911_31896262_31896517_31896605_31896825_31896922_31896990_31897635
H1_mix_00075095	chr6	-	4008	28	FSM	ENSG00000204371.11	ENST00000375537.8	3965	28	-43	0	-40	0	multi-exon	FALSE	canonical	3	568	junction_19	120.153297145001	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGATTTTTGTGTTGGGG	4350	False	NA	NA	False	AATAAA	-20	NA	31897727	31879758	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31880265_31880672_31880849_31881013_31881093_31882698_31882786_31882893_31883010_31883361_31883440_31883805_31883951_31884391_31884560_31884644_31884800_31884911_31885017_31886580_31886683_31886774_31886898_31886994_31887102_31887576_31887660_31887778_31887962_31888040_31888277_31888362_31888507_31888598_31888748_31888968_31889071_31889227_31889343_31889467_31889603_31892406_31892563_31892693_31892735_31892825_31892911_31896262_31896517_31896605_31896825_31896922_31896990_31897635
H1_mix_00075097	chr6	-	547	3	FSM	ENSG00000204371.11	ENST00000463484.1	547	3	0	0	0	0	multi-exon	FALSE	canonical	3	780	junction_1	13.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGACAGCAAGGTGAGACAG	8891	False	NA	NA	False	NA	NA	NA	31893186	31892417	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31892563_31892693_31892735_31892825
H1_mix_00075098	chr6	-	1454	4	FSM	ENSG00000204371.11	ENST00000465429.1	1454	4	0	0	0	0	multi-exon	FALSE	canonical	3	773	junction_3	89.7118845093682	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAAAAAGAT	4	True	NA	NA	False	NA	NA	NA	31897687	31895400	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31896517_31896605_31896825_31896922_31896990_31897635
H1_mix_00075099	chr6	-	1963	2	FSM	ENSG00000204366.4	ENST00000375527.3	1963	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAATGTTTTATTCCTGG	-9	True	NA	NA	False	NA	NA	NA	31902086	31899612	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31901326_31901836
H1_mix_00075100	chr6	-	1446	11	FSM	ENSG00000204356.14	ENST00000375429.8	1445	11	0	-1	0	1	multi-exon	TRUE	canonical	3	637	junction_10	94.5640523666367	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTCGCAGCTGTTTTA	-13	True	NA	-2	True	NA	NA	NA	31958971	31952085	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31952399_31953728_31953832_31954079_31954135_31954297_31954443_31954554_31954893_31955058_31955097_31955218_31955294_31956692_31956839_31956940_31957011_31958371_31958455_31958891
H1_mix_00075101	chr6	-	1544	10	FSM	ENSG00000204356.14	ENST00000481121.5	1543	10	0	-1	0	0	multi-exon	FALSE	canonical	3	637	junction_9	99.4109813344408	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTCCCTCAGCCTCTGG	-4	True	NA	-29	True	AGTAAA	-21	NA	31958962	31952226	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31952399_31953728_31954135_31954297_31954443_31954554_31954893_31955058_31955097_31955218_31955294_31956692_31956839_31956940_31957011_31958371_31958455_31958891
H1_mix_00075104	chr6	-	1670	7	FSM	ENSG00000204348.10	ENST00000375349.7	1667	7	0	-3	0	0	multi-exon	TRUE	canonical	2	10	junction_6	40.4162371111194	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGCTGTCTTCTTAGCTG	6	True	NA	0	True	AATAAA	-21	NA	31972290	31969809	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31970025_31970108_31970204_31970342_31970479_31970605_31970826_31970911_31971148_31971319_31971726_31971928
H1_mix_00075105	chr6	-	1268	7	NIC	ENSG00000204348.10	novel	1667	7	NA	NA	-25	1	combination_of_known_junctions	FALSE	canonical	3	14	junction_6	39.1340289546351	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCGCTGTCTTCTTAGC	2	True	NA	-2	True	AATAAA	-19	NA	31972034	31969811	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_31970025_31970108_31970204_31970342_31970479_31970605_31970826_31970911_31971148_31971319_31971582_31971928
H1_mix_00075106	chr6	-	2605	14	FSM	ENSG00000168477.19	ENST00000490077.5	2756	14	151	0	151	0	multi-exon	FALSE	canonical	3	10	junction_10	3.77472127581086	2078	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCATCGGTCCTGCCCCA	NA	False	NA	NA	False	AATAAA	-21	NA	32046456	32041154	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32041451_32041770_32041935_32042011_32042174_32042265_32042363_32042454_32042607_32042698_32042832_32042950_32043082_32043174_32043319_32043436_32043557_32043748_32043893_32044006_32044130_32044380_32044717_32045005_32045327_32046174
H1_mix_00075108	chr6	-	1176	8	FSM	ENSG00000213676.13	ENST00000495579.5	1176	8	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_7	8.66614336463034	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAATAAAAATAAAAA	1	True	NA	NA	False	AAAAAG	-13	NA	32128222	32120441	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32120903_32120988_32121125_32121262_32121349_32126116_32126253_32127102_32127195_32127441_32127521_32127670_32127751_32128116
H1_mix_00075110	chr6	-	1600	3	FSM	ENSG00000204314.12	ENST00000495191.5	2782	3	1175	7	-891	-3	multi-exon	FALSE	canonical	3	14	junction_2	7.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTATCGCCCGCAATTC	3616	False	NA	-38	True	ATTAAA	-11	NA	32150748	32148365	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32149399_32149536_32149723_32150367
H1_mix_00075111	chr6	-	572	3	FSM	ENSG00000284954.1	ENST00000485392.5	567	3	0	-5	0	5	multi-exon	FALSE	canonical	2	4	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCGACTCAGGAGCTGGAG	31	True	NA	0	True	AATAAA	-24	NA	32154333	32152796	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32153173_32153736_32153837_32154237
H1_mix_00075115	chr6	-	2233	7	FSM	ENSG00000204310.13	ENST00000336984.6	2021	7	0	-212	0	212	multi-exon	TRUE	canonical	2	5	junction_6	180.795848649489	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTCTGTATAAATTAGGG	2	True	NA	NA	False	NA	NA	NA	32178096	32167999	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32169449_32169965_32170039_32170164_32170261_32170424_32170601_32170936_32171071_32171296_32171506_32178000
H1_mix_00075119	chr6	-	3229	9	FSM	ENSG00000204304.12	ENST00000375050.6	3229	9	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_8	4.35710626448334	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTGAGAATTTTTTTC	-10	True	NA	-3	True	AATAAA	-22	NA	32190202	32184732	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32186475_32186603_32186691_32186812_32186902_32187241_32187396_32187646_32187783_32187965_32188157_32188256_32188505_32188722_32188797_32189694
H1_mix_00075121	chr6	-	1629	2	FSM	ENSG00000204301.6	ENST00000491215.1	1632	2	0	3	0	-3	multi-exon	FALSE	canonical	3	5	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCTTTTTTTGGAGGAAT	NA	False	NA	-3	True	AATAAA	-15	NA	32196977	32194845	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32196422_32196924
H1_mix_00075124	chr6	-	1221	6	FSM	ENSG00000196126.11	ENST00000360004.5	1229	6	8	0	8	0	multi-exon	FALSE	canonical	1	5	junction_5	29.7563438614357	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCATCTGGTCCATTTGGC	3	True	NA	-27	True	ATTAAA	-24	NA	32589840	32578768	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32579105_32580246_32580271_32580745_32580857_32581556_32581839_32584108_32584379_32589642
H1_mix_00075125	chr6	-	1641	5	FSM	ENSG00000179344.17	ENST00000434651.7	1605	5	-16	-20	-9	20	multi-exon	FALSE	canonical	3	12	junction_4	1.11803398874989	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTCATGGTACAAAGGA	2	True	NA	18	True	AATAAA	-42	NA	32666673	32659446	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32660250_32661346_32661458_32661966_32662249_32664797_32665068_32666498
H1_mix_00075126	chr6	-	5679	12	FSM	ENSG00000204267.17	ENST00000374897.4	5643	12	-31	-5	-31	5	multi-exon	TRUE	canonical	2	8	junction_2	3.19348510368187	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGTTCCATATTTCATT	-5	True	NA	1	True	ATTAAA	-30	NA	32838770	32825409	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32829035_32829399_32829537_32829929_32830090_32830266_32830441_32830617_32830807_32832332_32832462_32832626_32832825_32835153_32835360_32835642_32835774_32837536_32837652_32837740_32838238_32838652
H1_mix_00075128	chr6	-	1124	6	FSM	ENSG00000204264.12	ENST00000374882.8	1124	6	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_5	46.6021458733394	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTCTTGTGGCTGAAT	-23	True	NA	NA	False	AATAAA	-19	NA	32844047	32840716	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32841048_32841530_32841736_32842133_32842264_32842671_32842784_32842941_32843090_32843849
H1_mix_00075130	chr6	-	1327	6	FSM	ENSG00000204264.12	ENST00000374881.3	1327	6	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_5	43.5642054902876	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTCTTGTGGCTGAAT	-12	True	NA	NA	False	AATAAA	-19	NA	32844679	32840716	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32841048_32841530_32841736_32842133_32842264_32842671_32842784_32842941_32843090_32844278
H1_mix_00075133	chr6	-	3502	2	FSM	ENSG00000242574.9	ENST00000498020.1	4569	2	0	1067	0	-1060	multi-exon	FALSE	canonical	2	4	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCAACAGAAACTGGGTC	9830	False	NA	NA	False	AATAAA	-18	NA	32940984	32935695	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32938966_32940752
H1_mix_00075134	chr6	-	1099	5	FSM	ENSG00000204257.15	ENST00000374843.9	1093	5	0	-6	0	1	multi-exon	FALSE	canonical	3	56	junction_4	33.3504122913046	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTTCTTTCTTAACTC	-32	True	NA	-15	True	AATAAA	-20	NA	32953097	32948611	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32948869_32949270_32949400_32949610_32949890_32950518_32950804_32952948
H1_mix_00075135	chr6	-	1008	5	FSM	ENSG00000204257.15	ENST00000395303.7	1007	5	0	-1	0	1	multi-exon	FALSE	canonical	3	13	junction_3	53.625437061156	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTTCTTTCTTAACTC	-43	True	NA	-15	True	AATAAA	-20	NA	32953108	32948611	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32948869_32949270_32949400_32949610_32949788_32950518_32950804_32952948
H1_mix_00075136	chr6	-	1736	4	FSM	ENSG00000204257.15	ENST00000477541.1	1735	4	0	-1	0	1	multi-exon	FALSE	canonical	3	16	junction_1	53.0178167118271	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTTCTTTCTTAACTC	-43	True	NA	-15	True	AATAAA	-20	NA	32953108	32948611	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32948869_32949273_32949400_32949610_32950804_32952948
H1_mix_00075138	chr6	-	792	4	NNC	ENSG00000204257.15	novel	1093	5	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_3	54.9019327731021	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCAGTGTGGCTTCTTTCT	4787	False	NA	-21	True	AATAAA	-14	NA	32968479	32948617	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_32948869_32949270_32949400_32949610_32949890_32968346
H1_mix_00075139	chr6	-	1057	5	NIC	ENSG00000204257.15	novel	1093	5	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_4	55.9508713068885	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCAGTGTGGCTTCTTTCT	4152	False	NA	-21	True	AATAAA	-14	NA	32969114	32948617	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_32948869_32949270_32949400_32949610_32949890_32950518_32950804_32969001
H1_mix_00075140	chr6	-	1039	5	NNC	ENSG00000204257.15	novel	1093	5	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	49.3931928508373	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATATCAGTGTGGCTTCTT	4819	False	NA	-24	True	AATAAA	-11	NA	32968447	32948620	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_32948869_32949273_32949400_32949610_32949890_32950518_32950804_32968346
H1_mix_00075141	chr6	-	3469	5	FSM	ENSG00000204252.14	ENST00000229829.7	3464	5	0	-5	0	5	multi-exon	FALSE	canonical	3	36	junction_4	2.54950975679639	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTTTTTTTTACTGTTG	1	True	NA	NA	False	ATTAAA	-26	NA	33009591	33004176	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33006842_33007079_33007216_33007310_33007593_33008012_33008262_33009454
H1_mix_00075142	chr6	-	472	2	FSM	ENSG00000204252.14	ENST00000467465.1	472	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGACATCCTGGTGGAG	10	True	NA	NA	False	NA	NA	NA	33009582	33008060	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33008405_33009454
H1_mix_00075143	chr6	-	1375	2	FSM	ENSG00000231389.8	ENST00000437811.1	1375	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCAGTTTGTTTCTTCCA	8	True	NA	NA	False	ATTAAA	-20	NA	33069248	33067659	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33068805_33069018
H1_mix_00075147	chr6	-	1369	6	FSM	ENSG00000204248.12	ENST00000682718.1	1380	6	0	11	0	-11	multi-exon	TRUE	canonical	3	4	junction_2	5.70613704707484	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCTCAGCCCTAACATCC	3971	False	NA	NA	False	NA	NA	NA	33189368	33184378	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33185055_33185700_33185779_33186626_33186819_33188361_33188525_33188977_33189189_33189319
H1_mix_00075148	chr6	-	1166	5	FSM	ENSG00000204248.12	ENST00000395194.1	1194	5	28	0	28	0	multi-exon	FALSE	canonical	2	6	junction_4	5.04975246918104	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGCTGGGAGCTGTGT	8239	False	NA	NA	False	AATAAA	-19	NA	33192426	33186444	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33186819_33188361_33188525_33188977_33189189_33189319_33189470_33192158
H1_mix_00075149	chr6	-	2917	10	FSM	ENSG00000204231.11	ENST00000374685.8	2846	10	-51	-20	0	20	multi-exon	FALSE	canonical	3	28	junction_3	17.5485217976886	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCAGCGCCGTTTCGGGC	0	True	NA	15	True	ATTAAA	-37	NA	33200665	33193567	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33194830_33194944_33195051_33195362_33195467_33195569_33195703_33195906_33196037_33196433_33196607_33197761_33197942_33198307_33198465_33199168_33199417_33200241
H1_mix_00075150	chr6	-	2905	10	FSM	ENSG00000204231.11	ENST00000374680.4	2885	10	0	-20	0	20	multi-exon	FALSE	canonical	3	27	junction_3	17.7451088722749	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCAGCGCCGTTTCGGGC	0	True	NA	15	True	ATTAAA	-37	NA	33200665	33193567	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33194830_33194944_33195051_33195362_33195455_33195569_33195703_33195906_33196037_33196433_33196607_33197761_33197942_33198307_33198465_33199168_33199417_33200241
H1_mix_00075151	chr6	-	1330	3	FSM	ENSG00000204231.11	ENST00000481441.1	1330	3	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	2.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTTCTCCTTCTCTTCC	9809	False	NA	NA	False	NA	NA	NA	33198635	33195784	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33196607_33197761_33197942_33198307
H1_mix_00075153	chr6	-	2094	16	NNC	ENSG00000227057.10	novel	2070	15	NA	NA	0	59515	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	187.315016898154	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCGGGCACGATGGCTCAT	-19	True	NA	NA	False	NA	NA	NA	33289239	33219592	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_33219618_33279108_33279375_33279496_33279611_33279763_33279860_33280427_33280523_33280673_33280988_33286794_33286895_33287090_33287227_33287354_33287506_33287613_33287719_33287964_33288027_33288147_33288236_33288357_33288471_33288613_33288695_33288803_33289014_33289101
H1_mix_00075154	chr6	-	2942	20	FSM	ENSG00000223501.9	ENST00000445902.3	2936	20	0	-6	0	0	multi-exon	FALSE	canonical	3	215	junction_10	25.7484098425181	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCATTTCCTTTCTCCTTC	-5	True	NA	-4	True	AATAAA	-24	NA	33271876	33250271	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33250988_33251517_33251637_33251859_33251972_33263483_33263550_33263771_33263880_33264007_33264104_33264373_33264498_33264781_33264901_33266556_33266713_33267187_33267322_33267681_33267740_33267864_33267998_33268107_33268209_33268498_33268650_33269013_33269190_33269489_33269558_33269743_33269820_33269998_33270052_33270198_33270284_33271585
H1_mix_00075159	chr6	-	3111	17	NIC	ENSG00000237441.10	novel	2687	17	NA	NA	0	6	combination_of_known_junctions	FALSE	canonical	3	98	junction_16	51.0231258842498	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCTTGCAGTACATATGA	-6	True	NA	0	True	AATAAA	-29	NA	33297692	33291647	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_33292314_33292429_33292545_33293015_33293307_33293412_33293525_33293603_33293700_33293794_33293917_33294033_33294067_33294687_33294763_33294976_33295046_33295126_33295212_33295318_33295423_33295507_33295760_33296027_33296326_33296413_33296465_33296597_33296777_33297031_33297116_33297213
H1_mix_00075161	chr6	-	2778	16	FSM	ENSG00000237441.10	ENST00000483151.5	2772	16	0	-6	0	6	multi-exon	FALSE	canonical	3	147	junction_15	44.0563275818582	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCTTGCAGTACATATGA	6786	False	NA	0	True	AATAAA	-29	NA	33298521	33291647	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33292314_33292429_33292545_33293015_33293307_33293412_33293700_33293794_33293917_33294033_33294067_33294687_33294763_33294976_33295046_33295126_33295212_33295318_33295423_33295507_33295760_33296027_33296326_33296413_33296465_33296597_33296777_33297031_33297116_33298454
H1_mix_00075162	chr6	-	2902	18	FSM	ENSG00000237441.10	ENST00000497454.6	2896	18	0	-6	0	6	multi-exon	FALSE	canonical	3	113	junction_17	52.7407972588747	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCTTGCAGTACATATGA	-12	True	NA	0	True	AATAAA	-29	NA	33298942	33291647	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33292314_33292429_33292545_33293015_33293307_33293412_33293525_33293603_33293700_33293794_33293917_33294033_33294067_33294687_33294763_33294976_33295046_33295126_33295212_33295318_33295423_33295507_33295760_33296027_33296326_33296413_33296465_33296597_33296777_33297031_33297116_33298454_33298652_33298869
H1_mix_00075169	chr6	-	6449	9	Fusion	ENSG00000231925.13_ENSG00000236104.3	novel	3450	8	NA	NA	0	0	multi-exon	FALSE	canonical	3	98	junction_8	70.4889175686505	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTCTCTCATTCCAACCC	-4	True	NA	-15	True	AATAAA	-23	NA	33317744	33299693	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr6_-_33301772_33303954_33303990_33304127_33304218_33304296_33304639_33304988_33305388_33313216_33313478_33313693_33313865_33314004_33316986_33317652
H1_mix_00075170	chr6	-	1299	7	FSM	ENSG00000231925.13	ENST00000489157.5	1299	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	107.889475338834	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCACTCACTGCCATCCTG	4	True	NA	-125	True	NA	NA	NA	33314254	33301759	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33301772_33303954_33303990_33304127_33304218_33304296_33304639_33304988_33305388_33313693_33313865_33314004
H1_mix_00075171	chr6	-	1888	7	FSM	ENSG00000231925.13	ENST00000426633.6	1888	7	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_5	18.9773256516531	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGTGTTTTTGGATGTTG	-4	True	NA	NA	False	NA	NA	NA	33314212	33303572	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33303990_33304127_33304218_33304296_33304639_33304988_33305388_33313216_33313478_33313693_33313865_33314004
H1_mix_00075172	chr6	-	1737	4	FSM	ENSG00000231925.13	ENST00000480730.5	2202	4	0	465	0	140	multi-exon	FALSE	canonical	3	271	junction_2	15.2825245151302	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTCAGCCCTACCCT	8887	False	NA	NA	False	NA	NA	NA	33314049	33304127	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33305388_33313216_33313478_33313693_33313865_33314004
H1_mix_00075175	chr6	-	2672	2	FSM	ENSG00000236104.3	ENST00000431845.3	2660	2	0	-12	0	0	multi-exon	FALSE	canonical	3	98	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAACCCGTGTGTTTGCTGG	-4	True	NA	-2	True	ATTAAA	-31	NA	33317744	33314405	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33316986_33317652
H1_mix_00075176	chr6	-	2562	8	FSM	ENSG00000204209.13	ENST00000374542.10	2558	8	0	-4	0	4	multi-exon	FALSE	canonical	3	629	junction_7	154.550434275333	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTTTTCTTGTCCTTCT	-23	True	NA	4	True	AATAAA	-29	NA	33322959	33318553	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33318803_33318996_33319220_33319379_33319855_33320010_33320225_33320379_33320592_33320735_33321568_33321718_33321978_33322861
H1_mix_00075177	chr6	-	2569	8	FSM	ENSG00000204209.13	ENST00000266000.10	2606	8	37	0	-14	0	multi-exon	FALSE	canonical	3	371	junction_7	238.4695248574	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGTCTTTTTCTTGTCC	-37	True	NA	0	True	AATAAA	-25	NA	33322973	33318557	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33318803_33318996_33319220_33319379_33319855_33320010_33320225_33320379_33320592_33320735_33321568_33321718_33321975_33322861
H1_mix_00075178	chr6	-	2422	9	FSM	ENSG00000204209.13	ENST00000620164.4	2462	9	45	-5	-12	4	multi-exon	FALSE	canonical	2	10	junction_2	347.60895324344	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTTTTCTTGTCCTTCT	-35	True	NA	4	True	AATAAA	-29	NA	33322971	33318553	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33318803_33318996_33319050_33319201_33319220_33319379_33319855_33320010_33320225_33320379_33320592_33320735_33321568_33321718_33321978_33322861
H1_mix_00075182	chr6	-	1055	5	FSM	ENSG00000112514.18	ENST00000462802.5	1054	5	0	-1	0	1	multi-exon	TRUE	canonical	3	2023	junction_3	82.592372529187	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTTTATTTCTCTTTAT	7619	False	NA	0	True	NA	NA	NA	33418043	33416440	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33416777_33416919_33416970_33417096_33417143_33417250_33417311_33417480
H1_mix_00075183	chr6	-	856	6	FSM	ENSG00000112514.18	ENST00000488034.6	855	6	0	-1	0	1	multi-exon	FALSE	canonical	3	608	junction_5	627.165879173923	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTTTATTTCTCTTTAT	0	True	NA	0	True	NA	NA	NA	33418107	33416440	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33416777_33416919_33416970_33417096_33417143_33417250_33417311_33417480_33417696_33417958
H1_mix_00075187	chr6	-	845	6	FSM	ENSG00000112514.18	ENST00000482684.5	837	6	0	-8	0	0	multi-exon	FALSE	canonical	3	453	junction_5	688.772995986341	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTGTTTTTTGTCAT	0	True	NA	-11	True	AATAAA	-24	NA	33418107	33416541	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33416777_33416919_33416970_33417096_33417143_33417250_33417311_33417480_33417696_33417868
H1_mix_00075189	chr6	-	2170	6	FSM	ENSG00000030110.14	ENST00000374467.4	2170	6	0	0	0	0	multi-exon	TRUE	canonical	3	406	junction_1	29.7011784277998	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGACTTAGTTTTTGTAT	-16	True	NA	-5	True	AATAAA	-17	NA	33580276	33572551	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33573908_33574033_33574215_33575297_33575442_33575792_33575929_33577534_33577636_33580024
H1_mix_00075190	chr6	-	1161	2	Antisense	novelGene_ENSG00000096433.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	26	junction_1	0	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCACCCCCATTCAGCTG	NA	False	NA	NA	False	NA	NA	NA	33633753	33632242	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr6_-_33633014_33633363
H1_mix_00075193	chr6	-	2942	9	FSM	ENSG00000161904.12	ENST00000293760.10	2941	9	0	-1	0	1	multi-exon	FALSE	canonical	3	519	junction_7	61.1902770054197	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTGCCCATGGTTCTT	1	True	NA	NA	False	AATAAA	-20	NA	33789130	33771211	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33772779_33776953_33777057_33777137_33777240_33778241_33778388_33780099_33780180_33781076_33781154_33784351_33784428_33786733_33786775_33788380
H1_mix_00075196	chr6	-	7661	11	NNC	ENSG00000124493.14	novel	7368	11	NA	NA	238	-379	intron_retention	FALSE	canonical	3	65	junction_10	12.5239770041309	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCGCCCCTCTTTCTGAC	236	False	NA	NA	False	NA	NA	NA	34145849	34019023	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_34022871_34028119_34028367_34035667_34036604_34040177_34040315_34040547_34040749_34056543_34056685_34058973_34059129_34061892_34062029_34091882_34092100_34132977_34133860_34145087
H1_mix_00075198	chr6	-	833	5	FSM	ENSG00000186577.14	ENST00000476320.6	818	5	0	-15	0	1	multi-exon	FALSE	canonical	3	40	junction_4	18.1796589626978	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAGAGGCTTAAAATGACC	30	True	NA	-11	True	AATAAA	-30	NA	34249006	34246379	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_34246869_34247043_34247150_34247466_34247493_34247680_34247865_34248978
H1_mix_00075199	chr6	-	807	5	FSM	ENSG00000186577.14	ENST00000394990.8	792	5	0	-15	0	1	multi-exon	FALSE	canonical	3	20	junction_3	27.6981497577004	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAGAGGCTTAAAATGACC	-4	True	NA	-11	True	AATAAA	-30	NA	34249040	34246379	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_34246869_34247043_34247150_34247466_34247493_34247740_34247865_34248978
H1_mix_00075200	chr6	-	1138	5	FSM	ENSG00000186577.14	ENST00000636500.1	1186	5	49	-1	-4	1	multi-exon	FALSE	canonical	3	31	junction_4	21.821720830402	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAGAGGCTTAAAATGACC	-23	True	NA	-11	True	AATAAA	-30	NA	34249059	34246379	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_34246869_34247043_34247150_34247466_34247493_34247680_34247865_34248726
H1_mix_00075202	chr6	-	9901	5	FSM	ENSG00000272325.2	ENST00000607016.2	9900	5	0	-1	0	1	multi-exon	FALSE	canonical	3	434	junction_2	21.3131414859471	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTTAGTGTCTGGTCTC	-13	True	NA	-2	True	AATAAA	-21	NA	34392669	34279677	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_34288932_34293450_34293536_34295640_34295686_34341861_34341973_34392263
H1_mix_00075203	chr6	-	781	6	FSM	ENSG00000124614.16	ENST00000621356.3	781	6	0	0	0	0	multi-exon	FALSE	canonical	3	1723	junction_5	3115.25245204943	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTCCATTTTGTTTG	7	True	NA	-10	True	AATAAA	-22	NA	34426026	34417453	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_34417548_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34425795
H1_mix_00075204	chr6	-	671	7	FSM	ENSG00000124614.16	ENST00000344700.8	671	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	4332.82348282657	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTCCATTTTGTTTG	36	False	NA	-10	True	AATAAA	-22	NA	34426052	34417453	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_34417548_34417797_34417898_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34426031
H1_mix_00075205	chr6	-	588	6	FSM	ENSG00000124614.16	ENST00000648437.1	588	6	0	0	0	0	multi-exon	FALSE	canonical	3	6754	junction_5	1435.86302967936	3804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTCCATTTTGTTTG	-2	True	NA	-10	True	AATAAA	-22	NA	34426069	34417453	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_34417548_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34426031
H1_mix_00075207	chr6	-	4352	5	FSM	ENSG00000196821.10	ENST00000374023.8	4338	5	0	-14	0	14	multi-exon	FALSE	canonical	3	39	junction_4	14.6714007511212	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGTGAGTTTTATTGCA	-5	True	NA	-1	True	ATTAAA	-36	NA	34696767	34587273	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_34590601_34606554_34606905_34646600_34646799_34654624_34654780_34696445
H1_mix_00075208	chr6	-	1849	5	FSM	ENSG00000064995.19	ENST00000361288.9	1849	5	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_1	19.4679223339318	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCAAAGTTTGACTAGATA	-16	True	NA	NA	False	AATACA	-39	NA	34888042	34877461	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_34878721_34879966_34880064_34880288_34880377_34882931_34883081_34887786
H1_mix_00075209	chr6	-	1757	4	FSM	ENSG00000064995.19	ENST00000420584.3	1465	4	24	-316	-5	0	multi-exon	FALSE	canonical	3	41	junction_1	167.348604880816	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCAAAGTTTGACTAGATA	-21	True	NA	NA	False	AATACA	-39	NA	34888047	34877461	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_34878721_34880288_34880377_34882931_34883081_34887786
H1_mix_00075210	chr6	-	2986	13	FSM	ENSG00000007866.22	ENST00000338863.13	2986	13	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_12	23.6835327225949	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTGTGTGCCAGACCTT	-1	True	NA	0	True	ATTAAA	-29	NA	35497079	35473596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_35475158_35475335_35475489_35475565_35475707_35475918_35476093_35476301_35476436_35477310_35477373_35478274_35478325_35478433_35478572_35479304_35479317_35480311_35480375_35484559_35484625_35486460_35486712_35496897
H1_mix_00075213	chr6	-	1504	9	ISM	ENSG00000112041.13	ENST00000614066.4	2084	14	859	5509	-43	0	internal_fragment	FALSE	canonical	1	5	junction_4	10.2225241501304	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGGGCTTTTTGGTTGTT	924	False	NA	-13	True	NA	NA	NA	35512010	35503385	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_35503658_35503736_35503849_35505740_35505854_35506002_35506174_35509208_35509313_35509633_35509751_35509826_35509929_35510860_35511011_35511647
H1_mix_00075214	chr6	-	740	2	NNC	ENSG00000289456.1	novel	719	2	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	267	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCGGGGTGGAGGTTCTGT	8820	False	NA	-3	True	AATAAA	-45	NA	35566959	35563134	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_35563529_35566613
H1_mix_00075217	chr6	-	4738	15	FSM	ENSG00000096063.16	ENST00000346162.10	4762	15	24	0	6	0	multi-exon	FALSE	canonical	3	553	junction_4	66.0548627881338	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTTCCAAAAATCTCTG	105	False	NA	-14	True	AATAAA	-20	NA	35921041	35833033	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_35835489_35838336_35838430_35842534_35842605_35857260_35857369_35869009_35869111_35869481_35869902_35870280_35870495_35870933_35870960_35872562_35872729_35874232_35874340_35886723_35886812_35888023_35888112_35888814_35888924_35890894_35891014_35920467
H1_mix_00075218	chr6	-	4348	16	FSM	ENSG00000096063.16	ENST00000373825.7	4348	16	0	0	0	0	multi-exon	FALSE	canonical	3	553	junction_4	64.1330561324571	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTGAGTATGCTTTTTT	-3	True	NA	54	True	AGTAAA	-13	NA	35921098	35832965	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_35835489_35838336_35838430_35842534_35842605_35857260_35857369_35869009_35869111_35869481_35869902_35870280_35870495_35870933_35870960_35872562_35872729_35874232_35874340_35886723_35886812_35888023_35888112_35888814_35888924_35890894_35891014_35920467_35920529_35921043
H1_mix_00075219	chr6	-	4423	16	FSM	ENSG00000096063.16	ENST00000423325.6	4357	16	0	-66	0	-2	multi-exon	FALSE	non_canonical	0	0	junction_14	180.276035259512	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGGTTGAGTATGCTTTT	-1	True	NA	52	True	AGTAAA	-11	NA	35921147	35832967	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_35835489_35838336_35838430_35842534_35842605_35857260_35857369_35869009_35869111_35869481_35869902_35870280_35870495_35870933_35870960_35872562_35872729_35874232_35874340_35886723_35886812_35888023_35888112_35888814_35888924_35890894_35891042_35920467_35920529_35921043
H1_mix_00075220	chr6	-	460	5	FSM	ENSG00000096063.16	ENST00000513367.1	634	5	0	174	0	-174	multi-exon	FALSE	canonical	3	685	junction_3	58.0102361656975	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTGAAGAATTATAAATAAA	-6	True	NA	NA	False	NA	NA	NA	35921101	35887998	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_35888112_35888814_35888924_35890894_35891014_35920467_35920529_35921043
H1_mix_00075224	chr6	-	3582	14	FSM	ENSG00000112079.9	ENST00000229812.8	3585	14	2	1	2	-1	multi-exon	FALSE	canonical	3	73	junction_13	30.9941777315424	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGTGGAAATACGTGGTG	-31	True	NA	-12	True	AATAAA	-13	NA	36547477	36493892	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_36495915_36496710_36496806_36497779_36497876_36498362_36498487_36499872_36499991_36506582_36506645_36507499_36507603_36515337_36515493_36517716_36517841_36521733_36521818_36524340_36524464_36525590_36525643_36540071_36540208_36547189
H1_mix_00075225	chr6	-	5424	3	NIC	ENSG00000112079.9	novel	3585	14	NA	NA	46700	-3	intron_retention	FALSE	canonical	3	163	junction_2	13	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTAGTGGAAATACGTGG	4305	False	NA	-14	True	AATAAA	-11	NA	36500779	36493894	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_36496806_36497779_36497876_36498362
H1_mix_00075226	chr6	-	3745	12	NIC	ENSG00000112079.9	novel	3585	14	NA	NA	6701	-3	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	49.1867750820808	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTAGTGGAAATACGTGG	6668	False	NA	-14	True	AATAAA	-11	NA	36540778	36493894	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_36495915_36496710_36496806_36497779_36497876_36498362_36498487_36506582_36506645_36507499_36507603_36515337_36515493_36517716_36517841_36521733_36521818_36524340_36524464_36525590_36525643_36540071
H1_mix_00075227	chr6	-	1516	4	FSM	ENSG00000137168.8	ENST00000373699.6	1516	4	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_3	34.6153466286591	162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGCTGTGGTCTGATTC	-3	True	NA	-21	True	AATAAA	-20	NA	36874803	36854828	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_36856034_36856585_36856655_36871717_36871873_36874716
H1_mix_00075229	chr6	-	1913	13	NNC	ENSG00000137409.20	novel	1955	12	NA	NA	0	36485	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1065.22786751109	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAACATACTCTTACCATA	349	False	NA	NA	False	AAAAAG	-1	NA	36986125	36931655	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_36931687_36968142_36968975_36970038_36970115_36970405_36970474_36970646_36970695_36972651_36972797_36975657_36975718_36977198_36977251_36977633_36977692_36978077_36978156_36978504_36978612_36981587_36981673_36985852
H1_mix_00075231	chr6	-	1913	13	NNC	ENSG00000137409.20	novel	1955	12	NA	NA	0	36485	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1306.21242104372	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAACATACTCTTACCATA	349	False	NA	NA	False	AAAAAG	-1	NA	36986125	36931655	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_36931688_36968142_36968975_36970038_36970115_36970405_36970474_36970647_36970695_36972651_36972797_36975657_36975718_36977198_36977251_36977633_36977692_36978077_36978156_36978504_36978612_36981587_36981673_36985852
H1_mix_00075232	chr6	-	3639	12	FSM	ENSG00000137409.20	ENST00000373616.9	2006	12	173	-1806	0	1806	multi-exon	FALSE	canonical	3	1938	junction_4	449.759292830736	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACGACATGGATGAACCTT	349	False	NA	NA	False	AATAAA	-24	NA	36986125	36966334	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_36968975_36970038_36970115_36970405_36970474_36970646_36970695_36972702_36972797_36975657_36975718_36977198_36977251_36977633_36977692_36978077_36978156_36978504_36978612_36981587_36981673_36985852
H1_mix_00075233	chr6	-	3761	12	FSM	ENSG00000137409.20	ENST00000373627.10	1955	12	0	-1806	0	1806	multi-exon	FALSE	canonical	3	1148	junction_4	657.552901432134	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACGACATGGATGAACCTT	278	False	NA	NA	False	AATAAA	-24	NA	36986196	36966334	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_36968975_36970038_36970115_36970405_36970474_36970646_36970695_36972651_36972797_36975657_36975718_36977198_36977251_36977633_36977692_36978077_36978156_36978504_36978612_36981587_36981673_36985852
H1_mix_00075234	chr6	-	652	4	FSM	ENSG00000198937.9	ENST00000373408.4	572	4	0	-80	0	80	multi-exon	FALSE	canonical	3	382	junction_3	54.7783412186483	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGCACTCAGGAATCAAGGA	-3	True	NA	NA	False	NA	NA	NA	37499893	37482857	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_37483290_37484809_37484863_37485099_37485195_37499821
H1_mix_00075235	chr6	-	8727	11	FSM	ENSG00000183826.18	ENST00000481247.6	8530	11	-197	0	22	0	multi-exon	FALSE	canonical	0	0	junction_5	22.7077079424587	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGAGTCGTCACTCTCTGC	NA	False	NA	-1	True	AATAAA	-19	NA	38640126	38168450	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_38175183_38192518_38192598_38256408_38256517_38288271_38288462_38344983_38345094_38577599_38577720_38580217_38580438_38592575_38592841_38593963_38594328_38597909_38598122_38639799
H1_mix_00075236	chr6	-	2017	6	FSM	ENSG00000124767.7	ENST00000373365.5	2016	6	0	-1	0	1	multi-exon	FALSE	canonical	3	1329	junction_3	101.833982540211	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCCATCATGTTCTTT	-8	True	NA	1	True	AATAAA	-38	NA	38703145	38675923	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_38677384_38682011_38682102_38682807_38682876_38684373_38684515_38686891_38686975_38702970
H1_mix_00075237	chr6	-	2018	2	FSM	ENSG00000112167.10	ENST00000229903.5	2018	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	1245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTTTGTTGACTGATTTA	-14	True	NA	-1	True	ATTAAA	-28	NA	39115186	39104062	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_39105777_39114882
H1_mix_00075238	chr6	-	3783	5	FSM	ENSG00000164626.9	ENST00000359534.4	3783	5	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	24.8130510014387	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGTGTGTGCTGTGTGT	-2	True	NA	-1	True	AATAAA	-20	NA	39229475	39188970	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_39191756_39194168_39194338_39194593_39194761_39195875_39195988_39228925
H1_mix_00075240	chr6	-	1134	3	FSM	ENSG00000124780.14	ENST00000503878.1	1134	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	3	1019	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTCGGCGACTACGTGAT	0	True	NA	NA	False	NA	NA	NA	39314425	39303978	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_39304656_39310892_39311008_39314083
H1_mix_00075244	chr6	-	2743	10	NIC	ENSG00000124615.20	novel	4143	11	NA	NA	0	-201	combination_of_known_junctions	TRUE	canonical	3	23	junction_1	36.0332493917548	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGCAAGAATGAAGACACTG	22	True	NA	NA	False	AATAAA	-22	NA	39934462	39905521	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_39907118_39909834_39909956_39912263_39912375_39912891_39913005_39913316_39913429_39913773_39913836_39916067_39916233_39925677_39925846_39927328_39927456_39934294
H1_mix_00075246	chr6	-	3131	3	FSM	ENSG00000156564.9	ENST00000338305.7	3164	3	0	33	0	-33	multi-exon	FALSE	canonical	2	8	junction_1	3.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTATTTCTTAATTTA	-8	True	NA	12	True	NA	NA	NA	40587364	40391623	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_40392913_40431713_40433132_40586940
H1_mix_00075247	chr6	-	3189	6	FSM	ENSG00000124596.17	ENST00000424266.7	3184	6	0	-5	0	5	multi-exon	FALSE	canonical	0	0	junction_1	129.022478661666	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGGCTACCTTAGATTT	-7	True	NA	-14	True	AATAAA	-31	NA	41072356	41064766	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_41067438_41068840_41068954_41070075_41070135_41071131_41071277_41071595_41071676_41072235
H1_mix_00075248	chr6	-	3503	6	FSM	ENSG00000124596.17	ENST00000479950.5	3330	6	-162	-11	-139	5	multi-exon	FALSE	canonical	0	0	junction_1	127.52568368764	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGGCTACCTTAGATTT	922	False	NA	-14	True	AATAAA	-31	NA	41072753	41064766	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_41067438_41068840_41068954_41070075_41070135_41071131_41071277_41071595_41071676_41072318
H1_mix_00075249	chr6	-	1515	6	FSM	ENSG00000124596.17	ENST00000463088.5	1515	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	147.182879439152	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCTTATGAGTCTTC	-2	True	NA	-7	True	AATAAA	-13	NA	41072489	41066474	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_41067438_41068840_41068954_41070075_41070135_41071131_41071277_41071595_41071676_41072334
H1_mix_00075250	chr6	-	1193	5	FSM	ENSG00000124596.17	ENST00000628419.2	1188	5	0	-5	0	0	multi-exon	FALSE	canonical	3	42	junction_1	125.412319968973	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTGTGCTTATGTCTAT	1098	False	NA	-1	True	AATAAA	-19	NA	41072577	41066787	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_41067438_41070075_41070135_41071131_41071277_41071595_41071676_41072318
H1_mix_00075251	chr6	-	704	3	FSM	ENSG00000124596.17	ENST00000469104.5	704	3	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_2	103.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTGCTTTCTCTTCAAA	-3	True	NA	NA	False	NA	NA	NA	41072490	41070824	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_41071277_41071595_41071676_41072318
H1_mix_00075252	chr6	-	401	3	FSM	ENSG00000124596.17	ENST00000471367.1	401	3	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_2	111	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCTAAGAACCAAATGTTT	0	True	NA	-8	True	AATAAA	-21	NA	41072320	41071040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_41071277_41071595_41071676_41072235
H1_mix_00075253	chr6	-	412	2	FSM	ENSG00000124596.17	ENST00000467234.1	422	2	0	10	0	-10	multi-exon	FALSE	canonical	3	159	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCATTATCTTTTTTTCTC	1112	False	NA	NA	False	ATTAAA	-8	NA	41072563	41071508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_41071676_41072318
H1_mix_00075254	chr6	-	2335	9	FSM	ENSG00000112561.19	ENST00000373033.6	2333	9	-4	2	-4	-2	multi-exon	FALSE	canonical	3	7	junction_8	4.41411089575239	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTGCTGGTCCTGTCTCT	-19	True	NA	-2	True	AGTAAA	-13	NA	41735612	41683979	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_41685079_41686089_41686238_41687093_41687170_41687752_41687810_41687907_41688029_41689730_41689812_41690662_41690918_41691000_41691236_41735349
H1_mix_00075257	chr6	-	2174	7	FSM	ENSG00000137218.10	ENST00000373018.7	2174	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	7.1043804953157	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGTGGATATCATCTTC	-15	True	NA	-9	True	AATATA	-18	NA	41779900	41770175	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_41771534_41771815_41771965_41772797_41772960_41775418_41775606_41776921_41777011_41778032_41778177_41779815
H1_mix_00075258	chr6	-	8940	8	FSM	ENSG00000164663.15	ENST00000682992.1	8940	8	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	7.77751862218068	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTTGTGTGCGGTATTT	-4	True	NA	-16	True	AATAAA	-6	NA	41895375	41789895	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_41796724_41798723_41798930_41799829_41799939_41803805_41804011_41805627_41807012_41871563_41871638_41891793_41891876_41895323
H1_mix_00075259	chr6	-	3537	7	FSM	ENSG00000164663.15	ENST00000373006.5	3177	7	-49	-311	-35	311	multi-exon	FALSE	canonical	3	9	junction_5	7.47031161033832	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTCTTTCTAGAAGGCC	NA	False	NA	NA	False	NA	NA	NA	41895410	41797333	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_41798930_41799829_41799939_41803805_41804011_41805627_41807012_41871563_41871638_41891793_41891876_41895323
H1_mix_00075260	chr6	-	2478	4	FSM	ENSG00000124641.16	ENST00000265350.9	2478	4	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_3	2.62466929133727	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTTGGCCTCCTGATTT	-12	True	NA	-20	True	AATAAA	-15	NA	41921139	41905353	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_41907288_41909268_41909523_41916784_41916940_41921004
H1_mix_00075261	chr6	-	1481	3	FSM	ENSG00000124641.16	ENST00000482361.1	1481	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	157	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCACTGTGGCCACACTT	-12	True	NA	NA	False	AAAAAG	-20	NA	41921139	41906195	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_41907288_41909268_41909523_41921004
H1_mix_00075263	chr6	-	2108	5	FSM	ENSG00000112576.13	ENST00000372991.9	2026	5	-68	-14	-68	-4	multi-exon	FALSE	canonical	3	239	junction_2	8.31790237980706	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGATTGGTGTGTGGGTAA	-23	True	NA	-6	True	AATAAA	-33	NA	41941876	41934937	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_41936108_41936558_41936696_41937234_41937395_41940369_41940586_41941451
H1_mix_00075265	chr6	-	894	3	FSM	ENSG00000188112.9	ENST00000356542.5	894	3	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	3	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGTGTGGTGGCTCATG	-4	True	NA	54	True	AATAAA	-32	NA	42142619	42126376	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_42126844_42128671_42128779_42142299
H1_mix_00075266	chr6	-	2100	7	FSM	ENSG00000048544.6	ENST00000053468.4	2100	7	0	0	0	0	multi-exon	TRUE	canonical	3	729	junction_5	52.1272481529574	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGCTCAGTTGTTGAC	1	True	NA	-10	True	ATTAAA	-26	NA	42217861	42206806	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_42208373_42208857_42208948_42210487_42210597_42211780_42211918_42214119_42214193_42214279_42214345_42217801
H1_mix_00075270	chr6	-	6783	6	NNC	ENSG00000124496.12	novel	4138	16	NA	NA	199164	-12	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_5	34.5797628678972	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTGCATTCCTTAAAAAAAA	8635	False	NA	0	True	AATAAA	-31	NA	42252097	42225236	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_42228670_42232680_42232893_42236204_42236412_42243247_42243362_42246455_42246545_42249369
H1_mix_00075271	chr6	-	7458	17	NIC	ENSG00000124496.12	novel	7286	18	NA	NA	-159	-12	intron_retention	FALSE	canonical	3	12	junction_15	22.7169230695973	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTGCATTCCTTAAAAAAAA	787	False	NA	0	True	AATAAA	-31	NA	42451420	42225236	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_42228670_42232680_42232893_42236204_42236412_42243247_42243362_42246455_42246545_42254850_42254927_42256727_42256832_42256962_42257103_42258134_42258202_42259338_42259724_42263319_42263569_42264703_42264855_42265750_42265798_42268153_42269849_42300637_42300750_42362946_42363080_42451176
H1_mix_00075272	chr6	-	7611	18	NNC	ENSG00000124496.12	novel	7646	18	NA	NA	82	0	intron_retention	FALSE	canonical	3	22	junction_17	19.7482424429308	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	244	False	NA	12	True	AATAAA	-43	NA	42451963	42225224	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_42228670_42232680_42232893_42236204_42236412_42243247_42243362_42246455_42246545_42254850_42254927_42256727_42256832_42256962_42257103_42258134_42258202_42259338_42259724_42263259_42263569_42264703_42264855_42265750_42265798_42268153_42269849_42300637_42300750_42362996_42363080_42451176_42451262_42451673
H1_mix_00075273	chr6	-	1610	1	FSM	ENSG00000124659.7	ENST00000372876.2	1606	1	0	-4	0	4	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTTTGTTTGGTGTGTGT	970	False	42746121	-15	True	AATAAA	-21	NA	42746103	42744493	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_42744500_42746100
H1_mix_00075274	chr6	-	557	1	FSM	ENSG00000221821.4	ENST00000408925.4	557	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCCCCAGAATGATTTT	5	True	NA	-11	True	AATAAA	-17	NA	42890821	42890264	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_42890300_42890800
H1_mix_00075275	chr6	-	653	2	FSM	ENSG00000287825.2	ENST00000667155.2	660	2	0	7	0	-7	multi-exon	FALSE	canonical	3	35	junction_1	0	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGGGCTTGGTGGCTCAC	5	True	NA	NA	False	AATAAA	-27	NA	42929457	42928286	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_42928647_42929164
H1_mix_00075276	chr6	-	434	1	FSM	ENSG00000181524.6	ENST00000326586.6	421	1	0	-13	0	13	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGCAATGGCACGATCTC	NA	False	NA	NA	False	AAAAAG	-26	NA	42956765	42956331	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_42956300_42956800
H1_mix_00075277	chr6	-	3445	17	FSM	ENSG00000124587.14	ENST00000304611.13	3444	17	0	-1	0	1	multi-exon	FALSE	canonical	3	41	junction_14	12.2268595211526	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATATTGTTTACCCTTCC	-2	True	NA	NA	False	AATAAA	-27	NA	42979181	42963863	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_42964472_42964789_42964930_42965074_42965153_42965251_42965369_42965680_42965790_42966043_42966106_42966241_42966448_42966524_42966658_42966781_42966859_42967367_42967564_42968289_42968499_42968873_42968986_42969667_42969802_42969884_42969988_42974002_42974087_42974874_42975039_42978268
H1_mix_00075278	chr6	-	2152	3	FSM	ENSG00000124733.5	ENST00000642555.1	2152	3	0	0	0	0	multi-exon	FALSE	canonical	3	1515	junction_2	31.5	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAATAGGGACAAGGTGAG	3181	False	NA	NA	False	NA	NA	NA	43013684	43011142	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43012622_43012925_43013029_43013114
H1_mix_00075279	chr6	-	2018	4	FSM	ENSG00000124733.5	ENST00000244711.4	2018	4	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_3	612.658868285516	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAATAGGGACAAGGTGAG	-11	True	NA	NA	False	NA	NA	NA	43013946	43011142	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43012622_43012925_43013029_43013114_43013390_43013785
H1_mix_00075280	chr6	-	1004	4	FSM	ENSG00000124733.5	ENST00000643776.1	1004	4	0	0	0	0	multi-exon	FALSE	canonical	3	945	junction_3	284.713891477041	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCGCTCCCTGCTTCCTT	2882	False	NA	-17	True	AATAAA	-28	NA	43013983	43012081	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43012622_43012925_43013029_43013114_43013390_43013897
H1_mix_00075282	chr6	-	3363	17	FSM	ENSG00000044090.13	ENST00000478630.2	3361	17	0	-2	0	0	multi-exon	FALSE	canonical	3	15	junction_15	30.8088867049752	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAACCCAAGAGTTTGA	5729	False	NA	NA	False	NA	NA	NA	43048160	43037641	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43038012_43038266_43038473_43038565_43038988_43040155_43040427_43040529_43040747_43040914_43041076_43042801_43042985_43043073_43043181_43043447_43043631_43044751_43044886_43045226_43045683_43045985_43046092_43046235_43046408_43046510_43046602_43046879_43047108_43047946_43047990_43048147
H1_mix_00075283	chr6	-	5539	26	FSM	ENSG00000044090.13	ENST00000674100.1	5549	26	30	-20	-11	0	multi-exon	FALSE	canonical	3	21	junction_24	24.7556377417347	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAACCCAAGAGTTTGA	5547	False	NA	NA	False	NA	NA	NA	43053913	43037641	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43038012_43038266_43038473_43038565_43038693_43038841_43038988_43040155_43040427_43040529_43040747_43040914_43041076_43042801_43042985_43043073_43043181_43043447_43043631_43044751_43044886_43045226_43045403_43045586_43045683_43045985_43046092_43046235_43046408_43046510_43046602_43046879_43047108_43048147_43048254_43048331_43048570_43049406_43049663_43049962_43050160_43050259_43050399_43050967_43051469_43051611_43051764_43052112_43052797_43053621
H1_mix_00075284	chr6	-	2473	7	ISM	ENSG00000044090.13	ENST00000673753.1	5707	25	9	11178	9	15	5prime_fragment	FALSE	canonical	3	21	junction_5	36.3761215940103	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAATATAAAGGCCGGGC	10	True	NA	17	True	AATAAA	-44	NA	43053842	43049083	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_43049663_43049962_43050160_43050259_43050399_43050967_43051469_43051611_43051764_43052112_43052797_43053621
H1_mix_00075285	chr6	-	2786	5	FSM	ENSG00000044090.13	ENST00000683493.1	2552	5	-197	-37	0	15	multi-exon	FALSE	canonical	3	72	junction_3	15.3704261489394	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAATATAAAGGCCGGGC	1	True	NA	17	True	AATAAA	-44	NA	43053851	43049083	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43050399_43050967_43051469_43051611_43051764_43052208_43052797_43053621
H1_mix_00075286	chr6	-	644	3	FSM	ENSG00000112651.12	ENST00000489623.1	570	3	66	-140	0	-66	multi-exon	FALSE	canonical	3	110	junction_1	197	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCCCCACCCCAATTCCC	38	True	NA	NA	False	AGTAAA	-33	NA	43059368	43054094	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43054487_43058064_43058234_43059285
H1_mix_00075288	chr6	-	906	6	FSM	ENSG00000112651.12	ENST00000230413.9	899	6	0	-7	0	7	multi-exon	TRUE	canonical	3	42	junction_1	163.767396022529	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGTTTTGTTTTGGGTG	12	True	NA	NA	False	AATAAA	-30	NA	43059394	43054224	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43054487_43055896_43056008_43056080_43056197_43056306_43056446_43058064_43058234_43059285
H1_mix_00075290	chr6	-	765	2	FSM	ENSG00000112651.12	ENST00000468957.1	689	2	8	-84	4	-43	multi-exon	FALSE	canonical	3	504	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACACTTTGAGAGGCCAA	-24	True	NA	NA	False	ACTAAA	-43	NA	43059430	43057613	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43058234_43059285
H1_mix_00075292	chr6	-	654	4	FSM	ENSG00000112667.13	ENST00000230431.11	654	4	0	0	0	0	multi-exon	FALSE	canonical	3	1250	junction_3	27.0102861065105	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTGTCTTGTGTGAGTC	-11	True	NA	-5	True	ATTAAA	-21	NA	43229481	43225628	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43225882_43226032_43226144_43226326_43226396_43229260
H1_mix_00075293	chr6	-	800	3	FSM	ENSG00000112667.13	ENST00000393987.2	796	3	0	-4	0	0	multi-exon	FALSE	canonical	3	1250	junction_2	31.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTCTGTCTTGTGTGAG	-8	True	NA	-7	True	ATTAAA	-19	NA	43229478	43225630	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43226144_43226326_43226396_43229260
H1_mix_00075296	chr6	-	818	7	NIC	ENSG00000146215.14	novel	991	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	56	junction_4	35.7650512216729	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCAGCCTCTGTGGCTTCT	-6	True	NA	-56	True	CATAAA	-17	NA	43308826	43305512	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_43305876_43306066_43306125_43306218_43306314_43306445_43306518_43307838_43307897_43308314_43308410_43308749
H1_mix_00075299	chr6	-	8301	10	FSM	ENSG00000171467.16	ENST00000361428.3	8210	10	-91	0	-91	0	multi-exon	FALSE	canonical	3	24	junction_2	13.9682178931713	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCCTTCTGGATTTTTG	NA	False	NA	-5	True	AATAAA	-14	NA	43369738	43336069	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43340503_43340789_43340909_43342111_43342212_43342675_43342880_43348323_43348626_43352376_43352477_43354663_43356146_43357125_43357766_43365291_43365441_43368966
H1_mix_00075301	chr6	-	1770	6	FSM	ENSG00000204052.4	ENST00000372441.1	2121	6	352	-1	352	1	multi-exon	FALSE	canonical	0	0	junction_1	2.0591260281974	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACCTGTCGTGTGGCTGTA	13	True	NA	-7	True	NA	NA	NA	43510334	43506967	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43507309_43507455_43507679_43507825_43507927_43508297_43508421_43508759_43508921_43509513
H1_mix_00075302	chr6	-	1507	9	FSM	ENSG00000137207.12	ENST00000372422.7	1507	9	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_8	17.4122801493658	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGCGGCTGATCCAGTG	-1	True	NA	-32	True	ATTAAA	-21	NA	43516926	43511831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43512316_43512439_43512564_43512760_43512875_43513068_43513201_43513358_43513452_43513587_43513634_43515594_43515702_43515888_43516096_43516726
H1_mix_00075308	chr6	-	3632	3	FSM	ENSG00000124571.18	ENST00000455854.2	3629	3	0	-3	0	0	multi-exon	FALSE	canonical	3	519	junction_1	20.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACCCATCTGCCTTTTTC	2259	False	NA	-3	True	AGTAAA	-22	NA	43526625	43522333	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43524006_43524470_43524636_43524830
H1_mix_00075309	chr6	-	5323	32	FSM	ENSG00000124571.18	ENST00000265351.12	5323	32	0	0	0	0	multi-exon	FALSE	canonical	1	166	junction_9	68.5294470987984	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACCCATCTGCCTTTTTC	-24	True	NA	-3	True	AGTAAA	-22	NA	43576038	43522333	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43524006_43524470_43524636_43524830_43524969_43525106_43525215_43525838_43525922_43526684_43526748_43527633_43527732_43528158_43528206_43528827_43528926_43530687_43530825_43531478_43531576_43533906_43534008_43546570_43546753_43547607_43547708_43548260_43548461_43549488_43549579_43549892_43549935_43551297_43551454_43553372_43553504_43555835_43555965_43558500_43558592_43560177_43560304_43560923_43561008_43562246_43562347_43565659_43565737_43567168_43567355_43568710_43568738_43570501_43570685_43570856_43570995_43572505_43572579_43573479_43573602_43575759
H1_mix_00075311	chr6	-	1039	1	FSM	ENSG00000219470.1	ENST00000402069.1	882	1	-120	-37	-120	37	mono-exon	FALSE	NA	NA	NA	NA	NA	255	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GGAAAAAAAAAAAGAAAAAT	NA	False	NA	NA	False	AATAAA	-15	NA	43539823	43538784	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43538800_43539800
H1_mix_00075312	chr6	-	1394	4	FSM	ENSG00000172432.19	ENST00000419497.5	1394	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	29.3181779030614	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCTTATGCGTTAGCTA	8506	False	NA	-8	True	AATAAA	-19	NA	43622804	43620489	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43621517_43621760_43621791_43622002_43622168_43622632
H1_mix_00075313	chr6	-	3035	12	FSM	ENSG00000172432.19	ENST00000307126.10	3031	12	0	-4	0	0	multi-exon	FALSE	canonical	3	36	junction_11	9.3737809124729	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCTTATGCGTTAGCTA	-8	True	NA	-8	True	AATAAA	-19	NA	43629264	43620489	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43621791_43622002_43622168_43622632_43622805_43623736_43623796_43623932_43624069_43624509_43624730_43624887_43625063_43625362_43625561_43625755_43625865_43626225_43626411_43626921_43626949_43628976
H1_mix_00075314	chr6	-	1163	6	FSM	ENSG00000096080.12	ENST00000372133.8	1163	6	0	0	0	0	multi-exon	FALSE	canonical	3	637	junction_2	37.992630864419	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCCCTGGTTGTCACCTT	0	True	NA	99	True	AAGAAA	-15	NA	43687791	43671201	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43671907_43675201_43675272_43675493_43675618_43678517_43678626_43681088_43681121_43687667
H1_mix_00075315	chr6	-	1017	5	FSM	ENSG00000096080.12	ENST00000372116.5	785	5	-30	-202	-30	-106	multi-exon	FALSE	canonical	3	31	junction_1	300.616449982365	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACAGCTGTGAGCTCCTT	NA	False	NA	-7	True	NA	NA	NA	43687821	43671307	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43671907_43675493_43675618_43678517_43678626_43681088_43681121_43687667
H1_mix_00075317	chr6	-	960	3	FSM	ENSG00000180992.7	ENST00000372014.5	957	3	0	-3	0	3	multi-exon	FALSE	canonical	3	1315	junction_2	163.5	208	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTTTTTATTTTTCTCA	7	True	NA	3	True	TATAAA	-26	NA	44127452	44113447	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_44114210_44116540_44116630_44127343
H1_mix_00075319	chr6	-	2246	4	FSM	ENSG00000157593.19	ENST00000619636.4	2063	4	0	-183	0	177	multi-exon	FALSE	non_canonical	0	0	junction_3	189.520447445652	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGATAACATCCACTTCAC	8275	False	NA	NA	False	AAAACA	-31	NA	44257352	44253918	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_44255645_44256341_44256497_44256684_44256879_44257181
H1_mix_00075321	chr6	-	4805	22	FSM	ENSG00000124608.5	ENST00000244571.5	4798	22	11	-18	11	18	multi-exon	TRUE	canonical	3	63	junction_16	12.8120903783866	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTCTGCAGTTTCTCA	-6	True	NA	-2	True	AGTAAA	-32	NA	44313336	44298712	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_44300712_44301155_44301267_44301380_44301465_44302059_44302171_44302390_44302514_44302801_44302911_44303065_44303176_44303285_44303424_44304180_44304322_44304419_44304534_44304644_44304818_44305053_44305199_44305652_44305787_44306279_44306392_44306493_44306533_44306922_44307032_44307248_44307395_44310298_44310444_44310993_44311162_44311389_44311536_44312071_44312264_44313080
H1_mix_00075322	chr6	-	1612	12	FSM	ENSG00000196284.17	ENST00000475057.5	1377	12	0	-235	0	235	multi-exon	FALSE	canonical	3	13	junction_1	36.2235939731355	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTAAAGTGTAAGCTTAG	-31	True	NA	55	True	NA	NA	NA	45377953	44809081	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_44809502_44829763_44829858_44932652_44932764_44953309_44953418_44954494_44954608_44961752_44961829_45003652_45003793_45014800_45014892_45020545_45020633_45105921_45106007_45365200_45365302_45377767
H1_mix_00075323	chr6	-	3948	9	FSM	ENSG00000196284.17	ENST00000674231.1	3941	9	0	-7	0	3	multi-exon	FALSE	canonical	3	106	junction_4	12.4241448397868	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTACTTGTTTAGAATTAA	NA	False	NA	NA	False	AATAAA	-35	NA	45106008	44826722	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_44829858_44932652_44932764_44953309_44953418_44954494_44954608_44961752_44961829_45003652_45003793_45014800_45014892_45020545_45020633_45105921
H1_mix_00075324	chr6	-	4214	11	FSM	ENSG00000196284.17	ENST00000371459.6	4211	11	0	-3	0	3	multi-exon	FALSE	canonical	3	106	junction_4	14.2534206420775	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTACTTGTTTAGAATTAA	-12	True	NA	NA	False	AATAAA	-35	NA	45377934	44826722	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_44829858_44932652_44932764_44953309_44953418_44954494_44954608_44961752_44961829_45003652_45003793_45014800_45014892_45020545_45020633_45105921_45106007_45365200_45365302_45377767
H1_mix_00075325	chr6	-	927	1	FSM	ENSG00000271857.1	ENST00000606796.1	927	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTCCGTGGCTGTTTATT	437	False	NA	NA	False	ATTAAA	-24	NA	45422005	45421078	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_45421100_45422000
H1_mix_00075326	chr6	-	3845	5	FSM	ENSG00000112796.10	ENST00000371383.7	3845	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	22.6163657557973	2443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACATCACTTATCATCATT	-16	True	NA	-11	True	AATAAA	-23	NA	46170980	46159184	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_46161754_46165386_46165564_46167433_46168298_46170052_46170115_46170807
H1_mix_00075327	chr6	-	3803	4	FSM	ENSG00000112796.10	ENST00000230565.3	2544	4	-29	-1230	-20	0	multi-exon	FALSE	canonical	3	44	junction_1	11.1455023315337	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACATCACTTATCATCATT	5	True	NA	-11	True	AATAAA	-23	NA	46171000	46159184	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_46161754_46165386_46165564_46167433_46168298_46170807
H1_mix_00075328	chr6	-	717	2	FSM	ENSG00000112796.10	ENST00000492313.1	725	2	0	8	0	-8	multi-exon	FALSE	canonical	3	71	junction_1	0	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCGAGACCATCCTGGCTAA	3454	False	NA	NA	False	NA	NA	NA	46167551	46164964	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_46165564_46167433
H1_mix_00075329	chr6	-	1477	3	ISM	ENSG00000112796.10	ENST00000230565.3	2544	4	2	4698	2	-156	5prime_fragment	FALSE	canonical	3	54	junction_2	8.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTAGTGTGCTCGTGACT	-5	True	NA	NA	False	ATTAAA	-28	NA	46170969	46165112	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_46165564_46167433_46168298_46170807
H1_mix_00075330	chr6	-	3422	5	FSM	ENSG00000172348.16	ENST00000371374.6	3416	5	0	-6	0	6	multi-exon	FALSE	canonical	3	98	junction_4	14.3003496460751	328	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTGGTTTAATTTCTG	6	True	NA	-12	True	AATATA	-20	NA	46491449	46220729	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_46223302_46246747_46246920_46248722_46248897_46456751_46456979_46491172
H1_mix_00075332	chr6	-	1915	12	FSM	ENSG00000146070.17	ENST00000274793.12	1915	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_10	13.4600725748046	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGTTGCAATGATACAAGA	12	True	NA	NA	False	ATTAAA	-23	NA	46735375	46704200	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_46704697_46705152_46705302_46707990_46708162_46709326_46709419_46710544_46710659_46711495_46711620_46712268_46712338_46714459_46714554_46716383_46716529_46716974_46717097_46722782_46722926_46735179
H1_mix_00075335	chr6	-	330	1	FSM	ENSG00000270761.1	ENST00000604014.1	330	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTAGTCTCTTGTCAG	517	False	NA	-23	True	AATAAA	-15	NA	47477572	47477242	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_47477200_47477600
H1_mix_00075336	chr6	-	3707	13	NNC	ENSG00000146085.8	novel	3811	13	NA	NA	35	-4	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_12	59.7291920997504	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACAGCTCTTGACAGTAT	6	True	NA	-13	True	AATAAA	-16	NA	49463218	49430363	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_49431857_49435455_49435624_49440205_49440354_49441839_49441972_49444638_49444755_49447669_49447786_49448815_49448928_49451465_49451715_49453584_49453757_49456079_49456238_49457690_49458059_49459081_49459506_49463167
H1_mix_00075337	chr6	-	3811	13	FSM	ENSG00000146085.8	ENST00000274813.4	3811	13	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_6	20.637580338359	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTCTTGACAGTATCTTT	-29	True	NA	-9	True	AATAAA	-20	NA	49463253	49430359	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_49431857_49435455_49435624_49440205_49440354_49441839_49441972_49444638_49444755_49447669_49447786_49448815_49448928_49451465_49451715_49453584_49453757_49456079_49456238_49457690_49458059_49459081_49459506_49463102
H1_mix_00075340	chr6	-	457	1	FSM	ENSG00000232702.3	ENST00000416077.1	457	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	475	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATCATCCTCCCCAGTT	5055	False	NA	NA	False	AATGAA	-34	NA	51410537	51410080	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_51410100_51410500
H1_mix_00075341	chr6	-	3092	18	NNC	ENSG00000112118.20	novel	3068	17	NA	NA	0	47513	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	651.900649445454	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAGAATGCATAGAAATAG	-9	True	NA	NA	False	AAAAAG	-6	NA	52284742	52216500	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_52216530_52264019_52264787_52266074_52266145_52266610_52266697_52267864_52267969_52269085_52269227_52272300_52272452_52273229_52273357_52273741_52273917_52276267_52276477_52277066_52277199_52277534_52277689_52278741_52278851_52279360_52279600_52282044_52282176_52282652_52282862_52283293_52283407_52284596
H1_mix_00075342	chr6	-	3207	17	FSM	ENSG00000112118.20	ENST00000616552.4	3208	17	0	1	0	0	multi-exon	FALSE	canonical	3	2165	junction_6	191.805148115868	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAATAGTCATAGTGTGT	NA	False	NA	-11	True	AATAAA	-23	NA	52284881	52264014	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_52264787_52266074_52266145_52266610_52266697_52267864_52267969_52269085_52269227_52272300_52272452_52273229_52273357_52273741_52273917_52276267_52276477_52277066_52277199_52277534_52277689_52278741_52278851_52279360_52279600_52282044_52282176_52282652_52282862_52283293_52283407_52284596
H1_mix_00075343	chr6	-	3094	16	FSM	ENSG00000112118.20	ENST00000229854.12	3095	16	0	1	0	0	multi-exon	FALSE	canonical	3	45	junction_15	681.767083068371	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAATAGTCATAGTGTGT	NA	False	NA	-11	True	AATAAA	-23	NA	52284881	52264014	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_52264787_52266074_52266145_52266610_52266697_52267864_52267969_52269085_52269227_52272300_52272452_52273229_52273357_52273741_52273917_52276267_52276477_52277066_52277199_52277534_52277689_52278741_52278851_52279360_52279600_52282044_52282176_52282652_52282862_52284596
H1_mix_00075350	chr6	-	1245	7	FSM	ENSG00000170899.11	ENST00000370963.9	1240	7	0	-5	0	0	multi-exon	FALSE	canonical	3	143	junction_5	17.4037033096088	997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTTGTTGTGAGAATTT	27	True	NA	-9	True	AATAAA	-22	NA	52995284	52977947	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_52978593_52982573_52982706_52984463_52984606_52985450_52985584_52987356_52987409_52994156_52994262_52995248
H1_mix_00075351	chr6	-	1126	6	FSM	ENSG00000170899.11	ENST00000477599.5	1127	6	0	1	0	-1	multi-exon	FALSE	canonical	0	0	junction_3	67.4726611302682	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCATTGTCTTGTTGTGA	7	True	NA	-15	True	AATAAA	-16	NA	52995304	52977953	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_52978593_52982573_52982706_52984463_52984606_52987356_52987409_52994156_52994262_52995248
H1_mix_00075353	chr6	-	2771	8	FSM	ENSG00000012660.14	ENST00000304434.11	2765	8	0	-6	0	0	multi-exon	FALSE	canonical	3	839	junction_4	32.7326835353989	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCATTTTACATTTTTTG	-12	True	NA	-10	True	ATTAAA	-20	NA	53348950	53267397	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_53269271_53270592_53270728_53273219_53273345_53275089_53275262_53276178_53276257_53291775_53291964_53295641_53295708_53348816
H1_mix_00075354	chr6	-	580	3	FSM	ENSG00000012660.14	ENST00000370913.5	580	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	406.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGAGATTTGTGTGTATT	12	True	NA	-17	True	AATAAA	-32	NA	53348926	53294087	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_53294492_53295641_53295708_53348816
H1_mix_00075355	chr6	-	3793	16	FSM	ENSG00000001084.13	ENST00000650454.1	3785	16	0	-8	0	8	multi-exon	TRUE	canonical	3	244	junction_11	22.3262675389825	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGAGTTCCACAGCT	-1	True	NA	4	True	AATAAA	-36	NA	53545101	53497332	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_53498968_53500044_53500166_53500246_53500351_53500431_53500514_53505391_53505497_53505802_53505896_53506912_53507026_53507479_53507619_53508594_53508712_53509175_53509251_53514203_53514338_53514438_53514498_53516108_53516223_53520777_53520961_53522414_53522528_53544495
H1_mix_00075357	chr6	-	2656	22	NNC	ENSG00000124749.17	novel	4094	29	NA	NA	2429	0	at_least_one_novel_splicesite	FALSE	non_canonical	2	11	junction_16	3.6184209983834	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAATGTCTTTTTTTATA	NA	False	NA	NA	False	AATAAA	-18	NA	56164508	56056589	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_56057845_56059164_56059243_56060017_56060219_56060740_56060796_56060890_56061038_56061648_56061682_56064577_56064623_56067294_56067331_56069045_56069118_56070744_56070799_56074231_56074286_56075478_56075533_56077528_56077574_56101471_56101526_56124061_56124116_56124238_56124291_56125564_56125621_56126095_56126150_56141784_56141839_56141929_56141984_56156886_56156950_56164422
H1_mix_00075359	chr6	-	1504	7	ISM	ENSG00000124749.17	ENST00000244728.10	4173	30	6	110316	6	12903	5prime_fragment	FALSE	canonical	3	14	junction_4	3.09569593683445	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTAGGAGGGATTGTTT	-18	True	NA	NA	False	NA	NA	NA	56247574	56166905	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_56166984_56168123_56168298_56170648_56170866_56170959_56171129_56179577_56180130_56182530_56182657_56247386
H1_mix_00075360	chr6	-	9948	42	NIC	ENSG00000151914.22	novel	16742	84	NA	NA	-251	-3	combination_of_known_junctions	FALSE	canonical	3	67	junction_41	39.4541880739354	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAATACCTGATTATTTAA	452	False	NA	NA	False	AATAAA	-20	NA	56542455	56457991	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_56459268_56460130_56460255_56463045_56463157_56463564_56463765_56466077_56466196_56469882_56469958_56470127_56470283_56471105_56471269_56472058_56472223_56473872_56474003_56476148_56476338_56477344_56477489_56482049_56482179_56482682_56482878_56485311_56485472_56487103_56487274_56489489_56489610_56492226_56492434_56492933_56493090_56494009_56494181_56497378_56497508_56497855_56498054_56501079_56501236_56501519_56501694_56503996_56504099_56506442_56506545_56506666_56506790_56508528_56508756_56509641_56509874_56511196_56511401_56515449_56515669_56517197_56517306_56517500_56517621_56526360_56526568_56527492_56527735_56528840_56528926_56529447_56529775_56529973_56530134_56532343_56532511_56535121_56535293_56536778_56536941_56540279
H1_mix_00075361	chr6	-	2823	13	FSM	ENSG00000151914.22	ENST00000651289.1	2823	13	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_5	32.3324742153905	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGTACTCACATACTATA	NA	False	NA	NA	False	AATAAA	-21	NA	56482089	56458057	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_56459268_56460130_56460255_56463045_56463157_56463564_56463765_56466077_56466196_56469882_56469958_56470127_56470283_56471105_56471269_56472058_56472223_56473872_56474003_56476148_56476338_56477344_56477489_56482049
H1_mix_00075362	chr6	-	3848	4	FSM	ENSG00000151914.22	ENST00000466429.5	2016	4	-1523	-309	274	57	multi-exon	FALSE	canonical	3	209	junction_1	17.5941909605289	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGATATATGTTTACTAAG	4377	False	NA	NA	False	AATAAA	-10	NA	56465839	56457929	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_56459268_56460130_56460255_56463045_56463157_56463564
H1_mix_00075366	chr6	-	7402	3	NNC	ENSG00000151914.22	novel	8971	24	NA	NA	5423	55	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	3	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATAGCTAAGTCATTTAA	8690	False	NA	49	True	NA	NA	NA	56622595	56614541	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_56617419_56617985_56620716_56620800
H1_mix_00075368	chr6	-	4830	7	FSM	ENSG00000112210.12	ENST00000468148.6	4830	7	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_6	24.9109525220445	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGTGATATGTATGAT	-20	True	NA	0	True	AATAAA	-19	NA	57222307	57186991	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_57190601_57193841_57193935_57194769_57194853_57196449_57196607_57207627_57207714_57210225_57210446_57221725
H1_mix_00075369	chr6	-	4941	1	FSM	ENSG00000272316.1	ENST00000606125.1	5352	1	418	-7	418	7	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTCTCTTCCATTTTGT	NA	False	NA	NA	False	AATAAA	-24	NA	57913493	57908552	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_57908600_57913500
H1_mix_00075370	chr6	-	3440	2	FSM	ENSG00000215190.9	ENST00000422882.1	2622	2	-781	-37	-781	28	multi-exon	FALSE	canonical	3	7	junction_1	0	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATACACATACATACAAAAA	NA	False	NA	26	True	NA	NA	NA	57951180	57946045	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_57947178_57948872
H1_mix_00075372	chr6	-	473	1	FSM	ENSG00000214561.3	ENST00000398588.2	1289	1	28	788	28	-788	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCAGACTTGTGTCTCTG	NA	False	NA	NA	False	AAAACA	-32	NA	58121001	58120528	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_58120500_58121000
H1_mix_00075374	chr6	-	2350	9	FSM	ENSG00000112232.10	ENST00000281156.5	2329	9	0	-21	0	21	multi-exon	FALSE	canonical	3	25	junction_2	59.6896923681133	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACAAATTCTGATTGAC	-29	True	NA	8	True	AATAAA	-36	NA	62286225	61679939	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_61681061_61697194_61697254_61732681_61732765_61894634_61894834_61901243_61901372_61978065_61978213_62047877_62047995_62177184_62177313_62285857
H1_mix_00075376	chr6	-	2698	9	NNC	ENSG00000112232.10	novel	2403	10	NA	NA	46	-19317	at_least_one_novel_splicesite	FALSE	canonical	3	72	junction_2	46.8954955192927	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTTGCATGTTATTTT	17	True	NA	NA	False	ATTAAA	-43	NA	62286179	61699277	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_61700778_61707329_61707404_61732681_61732765_61894634_61894834_61901243_61901372_61978065_61978213_62047877_62047995_62177184_62177313_62285857
H1_mix_00075378	chr6	-	1469	7	NNC	ENSG00000112232.10	novel	2403	10	NA	NA	37	-147049	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	57.9475337410201	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATATAGTCTCAATTATT	8	True	NA	-4	True	AGTAAA	-14	NA	62286188	61827009	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_61827429_61894634_61894834_61901243_61901372_61978065_61978213_62047877_62047995_62177184_62177313_62285857
H1_mix_00075379	chr6	-	1168	1	FSM	ENSG00000233859.2	ENST00000433151.1	1110	1	4	-62	4	62	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGCGCCTCCAAACTCA	NA	False	NA	NA	False	NA	NA	NA	65838035	65836867	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_65836900_65838000
H1_mix_00075380	chr6	-	3779	16	FSM	ENSG00000168216.13	ENST00000649934.3	3900	16	103	18	-1	-18	multi-exon	FALSE	canonical	3	264	junction_6	34.7118935749054	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTTGTTTAAGCCACT	-4	True	NA	NA	False	AATAAA	-1	NA	69796907	69674027	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_69676272_69676449_69676542_69697562_69697642_69699042_69699193_69700764_69700870_69701442_69701546_69701888_69701954_69713644_69713798_69718955_69719082_69737941_69738016_69741788_69741878_69749340_69749409_69752258_69752357_69780493_69780555_69790295_69790473_69796812
H1_mix_00075382	chr6	-	2831	1	FSM	ENSG00000168216.13	ENST00000649404.1	2851	1	-21	41	0	-41	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAGTGCCTGGGCAACAG	-2	True	NA	NA	False	NA	NA	NA	69796608	69793777	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_69793800_69796600
H1_mix_00075383	chr6	-	2977	33	FSM	ENSG00000112280.18	ENST00000683980.1	2957	33	0	-20	0	0	multi-exon	FALSE	canonical	3	12	junction_14	34.5316883456341	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTCTATAGGTGTATGT	160	False	NA	-10	True	ATTAAA	-14	NA	70283105	70216039	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_70217082_70225931_70226010_70232582_70232772_70234538_70234594_70234793_70234941_70239253_70239287_70240688_70240734_70241418_70241455_70241963_70242036_70242661_70242716_70252119_70252174_70252261_70252316_70253384_70253430_70254475_70254530_70254739_70254770_70254962_70255017_70255149_70255204_70255336_70255391_70256767_70256822_70260656_70260711_70263243_70263298_70266716_70266771_70268803_70268861_70269632_70269666_70270313_70270368_70271654_70271709_70272064_70272089_70274046_70274083_70274718_70274773_70280811_70280875_70281003_70281040_70281389_70281465_70282980
H1_mix_00075384	chr6	-	3061	32	FSM	ENSG00000112280.18	ENST00000320755.12	3051	32	0	-10	0	10	multi-exon	FALSE	canonical	3	123	junction_28	12.6477943275797	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGTATGTTTATAATATT	56	False	NA	0	True	ATTAAA	-24	NA	70283209	70216029	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_70217082_70225931_70226010_70232582_70232772_70234538_70234594_70234793_70234941_70239253_70239287_70240688_70240734_70241418_70241455_70241963_70242036_70242661_70242716_70252119_70252174_70252261_70252316_70253384_70253430_70254475_70254530_70254962_70255017_70255149_70255204_70255336_70255391_70256767_70256822_70260656_70260711_70263243_70263298_70266716_70266771_70268803_70268861_70269632_70269666_70270313_70270368_70271654_70271709_70272064_70272089_70274046_70274083_70274718_70274773_70280811_70280875_70281003_70281040_70281389_70281465_70282980
H1_mix_00075385	chr6	-	3513	19	FSM	ENSG00000112280.18	ENST00000493682.7	3513	19	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_5	10.8177951246095	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATATGGTTTCTTAATC	NA	False	NA	-26	True	TTTAAA	-38	NA	70262099	70216143	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_70217082_70225931_70226010_70232582_70232772_70234538_70234594_70234793_70234941_70239253_70239287_70240688_70240734_70241418_70241455_70241963_70242036_70242661_70242716_70252119_70252174_70252261_70252316_70253384_70253430_70254475_70254530_70254962_70255017_70255149_70255204_70255336_70255391_70256767_70256822_70260656
H1_mix_00075386	chr6	-	2902	31	NIC	ENSG00000112280.18	novel	3051	32	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_28	26.9113978331363	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATATGGTTTCTTAATC	-3	True	NA	-26	True	TTTAAA	-38	NA	70283227	70216143	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_70217082_70225931_70226010_70232582_70232772_70234538_70234594_70234793_70234941_70239253_70239287_70240688_70240734_70241418_70241455_70241963_70242036_70242661_70242716_70252119_70252174_70252261_70252316_70253384_70253430_70254475_70254530_70254962_70255017_70255149_70255204_70255336_70255391_70256767_70256822_70260656_70260711_70263243_70263298_70266716_70266771_70268803_70268861_70269632_70269666_70270313_70270368_70271654_70271709_70272064_70272089_70274046_70274083_70274718_70274773_70281003_70281040_70281389_70281465_70282980
H1_mix_00075387	chr6	-	871	1	FSM	ENSG00000232389.1	ENST00000454078.1	1101	1	87	143	87	-143	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGACCAAAGCACTGTCG	NA	False	NA	NA	False	NA	NA	NA	70609247	70608376	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_70608400_70609200
H1_mix_00075388	chr6	-	6407	4	FSM	ENSG00000112309.11	ENST00000230053.11	6587	4	0	180	0	-180	multi-exon	FALSE	canonical	3	11	junction_3	7.11805216802087	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTGAGACAAACACCAAAATA	-13	True	NA	NA	False	NA	NA	NA	70957060	70856858	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_70861750_70861829_70861979_70894127_70894273_70955838
H1_mix_00075389	chr6	-	231	1	FSM	ENSG00000279289.1	ENST00000624429.1	3978	1	3731	16	3731	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAAAAAAAAAAAAAACTGC	3751	False	NA	NA	False	AAAACA	-25	NA	71387098	71386867	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_71386900_71387100
H1_mix_00075390	chr6	-	1179	2	FSM	ENSG00000233237.8	ENST00000421704.6	1252	2	73	0	73	0	multi-exon	FALSE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAGAAAGCACTGGACTG	3432	False	NA	NA	False	AAAAAG	-21	NA	71417400	71415461	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_71416560_71417319
H1_mix_00075391	chr6	-	1129	4	FSM	ENSG00000135314.13	ENST00000257765.9	1134	4	8	-3	-4	3	multi-exon	FALSE	canonical	2	3	junction_3	11.5854314646552	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGATGTACTGTCCTTTTT	15	False	NA	0	True	AATAAA	-25	NA	73263176	73241310	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73241729_73242054_73242238_73242405_73242531_73262773
H1_mix_00075392	chr6	-	1568	5	FSM	ENSG00000135314.13	ENST00000370384.7	1430	5	-137	-1	13	1	multi-exon	FALSE	canonical	3	13	junction_2	9.41740410091868	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCGATGTACTGTCCTTT	7783	False	NA	-2	True	AATAAA	-23	NA	73310352	73241312	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73241729_73242054_73242238_73242405_73242531_73291997_73292041_73309551
H1_mix_00075393	chr6	-	2335	3	FSM	ENSG00000135314.13	ENST00000484801.5	2053	3	-276	-6	-54	6	multi-exon	FALSE	canonical	3	27	junction_1	4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTATTATTGTCATTTTG	7716	False	NA	NA	False	AATAAA	-18	NA	73310419	73274132	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73275557_73291997_73292041_73309551
H1_mix_00075394	chr6	-	659	3	FSM	ENSG00000203909.4	ENST00000370370.4	659	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	7	5044	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTCAGTGTGGTTGATGG	-7	True	NA	NA	False	AATAAA	-17	NA	73354276	73353062	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73353379_73353852_73354033_73354113
H1_mix_00075396	chr6	-	738	1	FSM	ENSG00000224221.1	ENST00000421830.1	730	1	0	-8	0	8	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTAACATTTTGATACTG	3391	False	NA	NA	False	NA	NA	NA	73391767	73391029	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73391000_73391800
H1_mix_00075397	chr6	-	3201	5	FSM	ENSG00000164430.17	ENST00000370315.4	3201	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	3.20156211871642	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTTTGCTTTATACA	-18	True	NA	-15	True	AATAAA	-17	NA	73452297	73423710	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73425579_73428708_73428812_73440208_73440446_73445527_73445748_73451524
H1_mix_00075398	chr6	-	407	1	FSM	ENSG00000271986.2	ENST00000607480.2	288	1	-150	31	-150	-31	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCTGGGAAACATAGCGAG	NA	False	NA	NA	False	NA	NA	NA	73488027	73487620	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73487600_73488000
H1_mix_00075399	chr6	-	4449	7	FSM	ENSG00000156508.19	ENST00000316292.13	4441	7	0	-8	0	8	multi-exon	FALSE	canonical	3	19283	junction_6	1940.88668883294	7398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATTTCTTTTAACAGTTA	29	True	NA	2	True	AATAAA	-26	NA	73521018	73515741	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882
H1_mix_00075400	chr6	-	3520	8	FSM	ENSG00000156508.19	ENST00000309268.11	3512	8	0	-8	0	8	multi-exon	FALSE	canonical	3	15498	junction_7	2831.32361056717	11586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATTTCTTTTAACAGTTA	15	True	NA	2	True	AATAAA	-26	NA	73521032	73515741	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73520999
H1_mix_00075401	chr6	-	3709	8	FSM	ENSG00000156508.19	ENST00000615060.5	3694	8	0	-15	0	0	multi-exon	FALSE	canonical	2	218	junction_7	7746.22119329872	1090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAAGTGGCATTTCTTTT	6329	False	NA	-6	True	AATAAA	-18	NA	73520591	73515749	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73520361
H1_mix_00075402	chr6	-	1778	8	FSM	ENSG00000156508.19	ENST00000678508.1	1778	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_7	7809.54682110431	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTTCCTTTGGTCA	6706	False	NA	-5	True	ATTAAA	-17	NA	73520214	73517514	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73520150
H1_mix_00075403	chr6	-	1790	8	FSM	ENSG00000156508.19	ENST00000676710.1	1790	8	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_7	7816.01719652193	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTTCCTTTGGTCA	5935	False	NA	-5	True	ATTAAA	-17	NA	73520985	73517514	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73520909
H1_mix_00075404	chr6	-	1842	7	FSM	ENSG00000156508.19	ENST00000678515.1	1842	7	0	0	0	0	multi-exon	FALSE	canonical	3	15498	junction_6	2625.46944479565	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTTCCTTTGGTCA	15	True	NA	-5	True	ATTAAA	-17	NA	73521032	73517514	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73520999
H1_mix_00075405	chr6	-	2048	8	FSM	ENSG00000156508.19	ENST00000331523.7	2048	8	0	0	0	0	multi-exon	FALSE	canonical	3	660	junction_7	7595.85713076677	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTTCCTTTGGTCA	5080	False	NA	-5	True	ATTAAA	-17	NA	73521840	73517514	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73521506
H1_mix_00075406	chr6	-	1206	2	FSM	ENSG00000156508.19	ENST00000679031.1	1206	2	0	0	0	0	multi-exon	FALSE	canonical	3	20734	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACCTGTGTGTTCCTTTG	8109	False	NA	-9	True	ATTAAA	-13	NA	73518811	73517518	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73518611_73518697
H1_mix_00075407	chr6	-	1825	7	FSM	ENSG00000156508.19	ENST00000488500.2	1825	7	0	0	0	0	multi-exon	FALSE	canonical	3	15498	junction_6	3054.38335293176	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACCTGTGTGTTCCTTTG	16	True	NA	-9	True	ATTAAA	-13	NA	73521031	73517518	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73519229_73519336_73519517_73519882_73520057_73520999
H1_mix_00075408	chr6	-	2109	7	FSM	ENSG00000156508.19	ENST00000491404.2	2109	7	0	0	0	0	multi-exon	FALSE	canonical	3	15498	junction_6	2978.31792572027	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACCTGTGTGTTCCTTTG	15	True	NA	-9	True	ATTAAA	-13	NA	73521032	73517518	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73520057_73520999
H1_mix_00075409	chr6	-	2047	8	FSM	ENSG00000156508.19	ENST00000455918.2	2079	8	32	0	32	0	multi-exon	FALSE	canonical	1	92	junction_7	7789.11602749605	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACCTGTGTGTTCCTTTG	3137	False	NA	-9	True	ATTAAA	-13	NA	73523783	73517518	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73523446
H1_mix_00075410	chr6	-	3308	11	FSM	ENSG00000119899.13	ENST00000355773.6	3292	11	0	-16	0	16	multi-exon	FALSE	canonical	3	64	junction_4	9.46361453145678	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGATGTTTCCTAGTG	-26	True	NA	9	True	AATAAA	-31	NA	73653992	73593362	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73595215_73600350_73600442_73610399_73610548_73615314_73615448_73621803_73621963_73635381_73635501_73636620_73636708_73638411_73638500_73641690_73641925_73644406_73644604_73653792
H1_mix_00075412	chr6	-	527	3	NNC	ENSG00000119899.13	novel	3292	11	NA	NA	43	-8859	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	45.5	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTTTTATAGGAGTATTA	17	True	NA	NA	False	ATTAAA	-20	NA	73653949	73644091	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_73644265_73644406_73644604_73653792
H1_mix_00075414	chr6	-	782	4	FSM	ENSG00000112695.13	ENST00000370089.6	773	4	0	-9	0	0	multi-exon	FALSE	canonical	3	6020	junction_3	437.790665348939	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATTGTGATGTTATTTT	6303	False	NA	-4	True	ACTAAA	-14	NA	75244009	75237674	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_75237989_75240300_75240386_75241175_75241266_75243716
H1_mix_00075415	chr6	-	501	4	FSM	ENSG00000112695.13	ENST00000459637.2	501	4	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_2	2861.72818803992	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTCTGATTTTATCACT	6	True	NA	-22	True	AATAAA	-16	NA	75243787	75237786	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_75237989_75240300_75240386_75241122_75241266_75243716
H1_mix_00075416	chr6	-	928	2	FSM	ENSG00000112695.13	ENST00000481061.2	914	2	0	-14	0	14	multi-exon	FALSE	canonical	3	6020	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAGACATTTATTATTGT	-16	True	NA	NA	False	NA	NA	NA	75243809	75240430	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_75241266_75243716
H1_mix_00075417	chr6	-	4418	7	FSM	ENSG00000112697.17	ENST00000230461.11	4418	7	0	0	0	0	multi-exon	FALSE	canonical	3	722	junction_2	72.4931031202279	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGACCGTGGTGGCCTTAT	-26	True	NA	NA	False	AATAAA	-20	NA	75284792	75252923	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_75256296_75258779_75258987_75259346_75259491_75260823_75260912_75265230_75265339_75267640_75267749_75284401
H1_mix_00075418	chr6	-	2791	6	FSM	ENSG00000112697.17	ENST00000475111.6	2791	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	332.02530024081	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAAACAATGTAATGGTT	NA	False	NA	NA	False	AATATA	-17	NA	75284948	75254598	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_75256296_75258779_75258987_75259346_75259491_75260823_75260912_75265230_75265339_75284401
H1_mix_00075419	chr6	-	3765	3	FSM	ENSG00000118407.15	ENST00000498523.1	3764	3	3	-4	3	4	multi-exon	FALSE	canonical	3	24	junction_2	3	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAGAGTTTTACTTATTT	3	True	NA	2	True	AATAAA	-26	NA	75334787	75308083	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_75308898_75312396_75315203_75334642
H1_mix_00075420	chr6	-	4065	3	NNC	ENSG00000118407.15	novel	3764	3	NA	NA	19	4	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	13	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAGAGTTTTACTTATTT	19	False	NA	2	True	AATAAA	-26	NA	75334771	75308083	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_75308898_75312396_75315203_75334326
H1_mix_00075421	chr6	-	11926	40	FSM	ENSG00000146247.14	ENST00000275034.5	11926	40	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_30	40.6106899643676	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGTGCTTTGCATTA	8	True	NA	0	True	AATAAA	-22	NA	79078254	78934418	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_78941331_78945299_78945498_78946000_78946261_78946710_78946875_78947622_78947776_78954813_78954964_78955231_78955283_78955612_78955683_78958474_78958601_78961689_78961811_78963096_78963253_78965702_78965765_78965944_78966057_78969834_78969918_78970048_78970174_78970780_78970889_78978591_78978712_78982885_78983118_78985351_78985429_78988208_78988350_78990867_78990986_78997413_78997598_78998253_78998392_79001898_79002125_79003729_79003859_79015081_79015217_79015629_79015784_79016543_79016643_79017345_79017387_79017482_79017584_79019088_79019160_79025518_79025620_79025942_79026165_79042842_79043004_79060477_79060577_79060667_79060819_79077447_79077508_79077699_79077730_79077854_79077914_79078028
H1_mix_00075422	chr6	-	5694	17	FSM	ENSG00000146247.14	ENST00000479165.1	5694	17	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_16	30.3613009232147	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTACGAGACACTTCACTT	2477	False	NA	NA	False	AAAACA	-2	NA	78982943	78940545	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_78941331_78945299_78945498_78946000_78946261_78946710_78946875_78947622_78947776_78954813_78954964_78955231_78955283_78955612_78958601_78961689_78961811_78963096_78963253_78965702_78965765_78965944_78966057_78969834_78969918_78970048_78970174_78970780_78970889_78978591_78978712_78982885
H1_mix_00075423	chr6	-	5872	40	NNC	ENSG00000146247.14	novel	11926	40	NA	NA	-76	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_21	51.8309851253707	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTACGAGACACTTCACTT	NA	False	NA	NA	False	AAAACA	-2	NA	79078330	78940545	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_78941331_78945299_78945498_78946000_78946261_78946710_78946875_78947622_78947776_78954813_78954964_78955231_78955283_78955612_78955683_78958474_78958601_78961689_78961811_78963096_78963253_78965702_78965765_78965944_78966057_78969834_78969918_78970048_78970174_78970780_78970889_78978591_78978712_78982885_78983118_78985351_78985429_78988208_78988350_78990867_78990983_78997413_78997598_78998253_78998392_79001898_79002125_79003729_79003859_79015081_79015217_79015629_79015784_79016543_79016643_79017345_79017387_79017482_79017584_79019088_79019160_79025518_79025620_79025942_79026165_79042842_79043004_79060477_79060577_79060667_79060819_79077447_79077508_79077699_79077730_79077854_79077914_79078028
H1_mix_00075425	chr6	-	884	7	NNC	ENSG00000118418.14	novel	831	6	NA	NA	0	371	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1675.78996297269	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATCTCCCACTTTTGAA	-18	True	NA	NA	False	CATAAA	-16	NA	79234689	79200873	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_79200927_79201244_79201727_79202316_79202390_79203579_79203631_79208546_79208577_79214971_79215023_79234545
H1_mix_00075426	chr6	-	831	6	FSM	ENSG00000118418.14	ENST00000275036.11	831	6	0	0	0	0	multi-exon	FALSE	canonical	3	2691	junction_1	729.049627940376	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGACTCTTAGTATCTT	-18	True	NA	-6	True	AATAAA	-21	NA	79234689	79201244	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_79201727_79202316_79202390_79203579_79203631_79208546_79208577_79214971_79215023_79234545
H1_mix_00075427	chr6	-	872	6	FSM	ENSG00000118418.14	ENST00000344726.9	872	6	0	0	0	0	multi-exon	FALSE	canonical	3	1524	junction_1	1191.48942085106	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGACTCTTAGTATCTT	-18	True	NA	-6	True	AATAAA	-21	NA	79234689	79201244	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_79201727_79202275_79202390_79203579_79203631_79208546_79208577_79214971_79215023_79234545
H1_mix_00075428	chr6	-	4564	8	FSM	ENSG00000135338.14	ENST00000369846.9	4564	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	4.30471976380553	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGACTCTTTATTTAAGT	2	True	NA	0	True	AATAAA	-14	NA	79537430	79484990	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_79487867_79489083_79489217_79491587_79491731_79492550_79492648_79493612_79493751_79513211_79513742_79518704_79519086_79537164
H1_mix_00075432	chr6	-	5656	3	FSM	ENSG00000112773.16	ENST00000369754.7	5664	3	0	8	0	-8	multi-exon	FALSE	canonical	3	12	junction_2	9	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTGATTTGTGTTTGCT	515	False	NA	-9	True	AATAAA	-14	NA	81752708	81745737	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_81750472_81751589_81752179_81752375
H1_mix_00075436	chr6	-	3666	13	FSM	ENSG00000005700.15	ENST00000445419.6	3663	13	0	-3	0	0	multi-exon	FALSE	canonical	2	2	junction_7	38.066735989429	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTGCTTGACATTTTT	NA	False	NA	-4	True	AATAAA	-24	NA	82205929	82170235	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_82171557_82172379_82172513_82173366_82173439_82181878_82182029_82191072_82191217_82191786_82191880_82194478_82194596_82196297_82196447_82200140_82200254_82200586_82200709_82201421_82201483_82202527_82202646_82204856
H1_mix_00075437	chr6	-	4013	5	ISM	ENSG00000118420.17	ENST00000237186.10	1879	10	38915	2	31043	-2	3prime_fragment	FALSE	canonical	3	116	junction_1	8.20060973342836	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCCGTTACAGAGTTGTT	NA	False	NA	-27	True	AATAAA	-14	NA	83026926	82892399	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_82893043_82957311_82957451_83018972_83019137_83022452_83022562_83023968
H1_mix_00075440	chr6	-	1932	11	NNC	ENSG00000118420.17	novel	1352	11	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_6	43.2481213464816	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGTTACAGAGTTGTTCT	8	True	NA	-25	True	AATAAA	-16	NA	83065734	82892397	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_82893043_82957311_82957451_83018972_83019137_83022452_83022562_83023968_83024039_83025757_83025880_83038415_83038486_83044427_83044660_83054147_83054239_83057825_83058023_83065641
H1_mix_00075441	chr6	-	3237	6	FSM	ENSG00000118420.17	ENST00000505226.1	3255	6	0	18	0	-18	multi-exon	FALSE	canonical	2	2	junction_4	45.9190592238125	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	-15	True	NA	NA	False	NA	NA	NA	83065823	83036043	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_83038486_83044427_83044660_83054147_83054239_83057825_83058023_83063152_83063246_83065641
H1_mix_00075442	chr6	-	2013	14	FSM	ENSG00000013375.16	ENST00000512866.5	2013	14	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	116.199125153292	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCATTTTCTCTATTCTA	19	True	NA	-5	True	AATAAA	-19	NA	83193231	83166129	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_83166467_83169241_83169324_83170304_83170479_83171936_83172060_83174373_83174488_83175961_83176061_83178672_83178757_83179809_83179968_83181735_83181932_83182844_83182979_83187007_83187076_83188613_83188799_83190808_83191015_83193178
H1_mix_00075443	chr6	-	1866	12	FSM	ENSG00000013375.16	ENST00000651425.1	1866	12	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_11	123.583477993856	3103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATATCTTTGCCATCACC	695	False	NA	-5	True	ATTAAA	-19	NA	83193288	83168902	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_83169324_83170304_83170479_83171936_83172060_83174373_83174488_83175961_83176061_83178672_83178757_83179809_83179968_83181735_83181932_83182844_83182979_83187007_83187076_83188613_83188799_83193178
H1_mix_00075444	chr6	-	6075	13	FSM	ENSG00000013375.16	ENST00000513973.6	6079	13	0	4	0	-4	multi-exon	FALSE	canonical	3	399	junction_7	30.6508111185042	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGATTTCTCCTTTGAC	-15	True	NA	-1	True	AATAAA	-17	NA	83193265	83164876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_83169324_83170304_83170479_83171936_83172060_83174373_83174488_83175961_83176061_83178672_83178757_83179809_83179968_83181735_83181932_83182844_83182979_83187007_83187076_83188613_83188799_83190808_83191015_83193178
H1_mix_00075445	chr6	-	1912	12	FSM	ENSG00000013375.16	ENST00000650642.1	1893	12	0	-19	0	0	multi-exon	FALSE	canonical	3	13	junction_2	125.272991159506	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTGTGATATCTTTGCC	-7	True	NA	-11	True	ATTAAA	-13	NA	83193257	83168908	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_83169324_83170304_83170479_83174373_83174488_83175961_83176061_83178672_83178757_83179809_83179968_83181735_83181932_83182844_83182979_83187007_83187076_83188613_83188799_83190808_83191015_83193178
H1_mix_00075446	chr6	-	1952	13	FSM	ENSG00000013375.16	ENST00000509219.2	1952	13	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	119.298179179548	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTCTGTTTTCCGTTTA	-18	True	NA	2	True	ATTAAA	-22	NA	83193268	83169520	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_83169842_83170304_83170479_83171936_83172060_83174373_83174488_83175961_83176061_83178672_83178757_83179809_83179968_83181735_83181932_83182844_83182979_83187007_83187076_83188613_83188799_83190808_83191015_83193178
H1_mix_00075457	chr6	-	4098	29	FSM	ENSG00000135317.14	ENST00000682497.1	4212	29	0	114	0	105	multi-exon	TRUE	canonical	3	53	junction_27	54.1310767432882	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGTTTAATACCAAGCCC	8165	False	NA	NA	False	TTTAAA	-39	NA	85593901	85504889	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572372_85574257_85574379_85593578
H1_mix_00075458	chr6	-	4016	27	FSM	ENSG00000135317.14	ENST00000683785.1	4130	27	0	114	0	105	multi-exon	FALSE	canonical	3	53	junction_25	65.293431894186	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGTTTAATACCAAGCCC	-4	True	NA	NA	False	TTTAAA	-39	NA	85593951	85504889	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85572136_85572216_85572297_85572372_85574257_85574379_85593578
H1_mix_00075459	chr6	-	3455	29	FSM	ENSG00000135317.14	ENST00000314673.8	3452	29	0	-3	0	0	multi-exon	FALSE	canonical	3	129	junction_14	42.1632365978724	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGATTTGTCCTTATTCTTT	0	True	NA	NA	False	AATAAA	-32	NA	85593858	85505492	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572375_85574257_85574379_85593578
H1_mix_00075460	chr6	-	3351	26	FSM	ENSG00000135317.14	ENST00000346348.7	3348	26	0	-3	0	0	multi-exon	FALSE	canonical	3	55	junction_22	54.4621116006348	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGATTTGTCCTTATTCTTT	8153	False	NA	NA	False	AATAAA	-32	NA	85593913	85505492	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85572136_85572216_85572297_85572375_85574257_85574379_85593578
H1_mix_00075461	chr6	-	9207	28	FSM	ENSG00000135317.14	ENST00000682709.1	9207	28	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_13	42.1555353807458	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTATATGAGTTTTTAATAA	-39	True	NA	NA	False	AATAAA	-5	NA	85593897	85505519	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85506006_85507232_85507290_85507967_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572375_85574257_85574379_85593578
H1_mix_00075462	chr6	-	3029	27	NIC	ENSG00000135317.14	novel	3375	28	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_10	60.9773456817409	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTCTCATAGTCTTTCA	10	True	NA	-15	True	AATAAA	-31	NA	85593848	85505797	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85533598_85533801_85536791_85536925_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572375_85574257_85574379_85593578
H1_mix_00075463	chr6	-	3115	28	FSM	ENSG00000135317.14	ENST00000369627.6	3111	28	0	-4	0	0	multi-exon	FALSE	canonical	3	110	junction_13	39.8304362119475	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTCTCATAGTCTTTCA	8	True	NA	-15	True	AATAAA	-31	NA	85593850	85505797	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572375_85574257_85574379_85593578
H1_mix_00075464	chr6	-	2905	27	NIC	ENSG00000135317.14	novel	3193	29	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_20	70.1081581996977	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTCTCATAGTCTTTCA	8014	False	NA	-15	True	AATAAA	-31	NA	85594052	85505797	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572375_85574257_85574379_85593833
H1_mix_00075466	chr6	-	3193	29	FSM	ENSG00000135317.14	ENST00000505648.5	3193	29	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_28	54.1462847576934	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTCTCATAGTCTTTCA	7910	False	NA	-15	True	AATAAA	-31	NA	85594156	85505797	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572375_85574257_85574379_85593833
H1_mix_00075467	chr6	-	6770	11	FSM	ENSG00000135316.19	ENST00000616122.5	6770	11	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_10	309.576161872971	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAGTGTTACAGCTTCCT	1155	False	NA	-1	True	AATAAA	-21	NA	85642922	85607778	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85612924_85614980_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85642796
H1_mix_00075468	chr6	-	6591	13	FSM	ENSG00000135316.19	ENST00000676637.1	6591	13	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_12	325.745672351231	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCTTAATTTTTGATGGA	299	False	NA	-23	True	AATAAA	-11	NA	85643778	85608114	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85612924_85614980_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85642796_85642891_85643749
H1_mix_00075469	chr6	-	6511	12	FSM	ENSG00000135316.19	ENST00000678528.1	6511	12	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_11	306.935613890569	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCTTAATTTTTGATGGA	285	False	NA	-23	True	AATAAA	-11	NA	85643792	85608114	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85612924_85614980_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85643749
H1_mix_00075470	chr6	-	6427	12	FSM	ENSG00000135316.19	ENST00000678878.1	6427	12	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	296.748857280901	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTAGGATCTCCAGGA	-25	True	NA	-27	True	AATAAA	-17	NA	85642978	85608334	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85612921_85614980_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85642796
H1_mix_00075471	chr6	-	6443	12	FSM	ENSG00000135316.19	ENST00000355238.11	6443	12	0	0	0	0	multi-exon	FALSE	canonical	3	662	junction_1	162.943533290899	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTAGGATCTCCAGGA	1086	False	NA	-27	True	AATAAA	-17	NA	85642991	85608334	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85612924_85614980_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85642796
H1_mix_00075472	chr6	-	5951	6	FSM	ENSG00000135316.19	ENST00000677646.1	5951	6	0	0	0	0	multi-exon	FALSE	canonical	3	1109	junction_3	40.5886683693861	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGTGTAGAAATCTTCTG	5874	False	NA	22	True	AATAAA	-39	NA	85638203	85611247	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966
H1_mix_00075473	chr6	-	3098	10	FSM	ENSG00000135316.19	ENST00000678618.1	3098	10	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_6	345.385274229115	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGGAGGCGAGTGTAAC	29	True	NA	-22	True	AATAAA	-16	NA	85642924	85611321	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85612924_85614980_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85640220_85640329_85640445_85640565_85641291_85641452_85642796
H1_mix_00075474	chr6	-	3310	10	FSM	ENSG00000135316.19	ENST00000678899.1	3310	10	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_9	300.956417828394	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATGACTTGAAAGACAAAC	1066	False	NA	-16	True	AATAAA	-17	NA	85643011	85613384	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85642796
H1_mix_00075475	chr6	-	2754	11	FSM	ENSG00000135316.19	ENST00000369622.8	2754	11	0	0	0	0	multi-exon	FALSE	canonical	3	883	junction_10	100.097152806661	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAAGTTGGTAAGTATTT	7	True	NA	NA	False	AATAAA	-20	NA	85642886	85613975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85642796
H1_mix_00075477	chr6	-	2421	10	FSM	ENSG00000135316.19	ENST00000677514.1	2421	10	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_6	429.089245084182	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGTGTTTACAATTCG	-16	True	NA	54	True	AATAAA	-28	NA	85642969	85614205	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637268_85637357_85640220_85640329_85640445_85640565_85642796
H1_mix_00075478	chr6	-	2552	11	FSM	ENSG00000135316.19	ENST00000676688.1	2552	11	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_10	299.907652453218	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGTGTTTACAATTCG	-21	True	NA	54	True	AATAAA	-28	NA	85643867	85614205	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85643749
H1_mix_00075480	chr6	-	772	7	FSM	ENSG00000203875.13	ENST00000671650.1	772	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	1449.97674310851	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATACAGGGTCAACTGTACA	509	False	NA	-50	True	NA	NA	NA	85678748	85665811	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85666148_85677092_85677192_85677423_85677493_85677794_85677876_85677953_85678033_85678135_85678189_85678693
H1_mix_00075481	chr6	-	5169	5	FSM	ENSG00000203875.13	ENST00000658077.1	5169	5	0	0	0	0	multi-exon	FALSE	canonical	3	3280	junction_1	378.676230439673	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTAAACTCCCAGTACTT	507	False	NA	NA	False	NA	NA	NA	85678750	85672866	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85677192_85677423_85677493_85677794_85677876_85677953_85678033_85678135
H1_mix_00075482	chr6	-	3657	5	FSM	ENSG00000203875.13	ENST00000655116.1	3657	5	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_2	1550.90562253156	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATCAGACACTGCAGATT	509	False	NA	NA	False	NA	NA	NA	85678748	85673790	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85677192_85677423_85677493_85677953_85678033_85678135_85678189_85678693
H1_mix_00075483	chr6	-	2704	4	FSM	ENSG00000203875.13	ENST00000670094.1	2704	4	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_2	1780.03676616212	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGCAACAGACCAGGCTAA	325	False	NA	NA	False	NA	NA	NA	85678932	85675432	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85677192_85677423_85677493_85677953_85678033_85678135
H1_mix_00075484	chr6	-	1450	6	FSM	ENSG00000203875.13	ENST00000654795.1	1450	6	0	0	0	0	multi-exon	FALSE	canonical	3	2201	junction_5	720.652315614125	1283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTATGAAGGATTCTTGAAA	509	False	NA	NA	False	AATAAA	-44	NA	85678748	85676078	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85677192_85677423_85677493_85677794_85677876_85677953_85678033_85678135_85678189_85678693
H1_mix_00075485	chr6	-	1095	6	FSM	ENSG00000203875.13	ENST00000660318.1	1095	6	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_3	1455.85007469863	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCATTAGTTCAAGAGTG	509	False	NA	NA	False	CATAAA	-15	NA	85678748	85676426	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85677192_85677423_85677493_85677794_85677869_85677953_85678033_85678135_85678189_85678693
H1_mix_00075486	chr6	-	884	3	FSM	ENSG00000203875.13	ENST00000663448.1	871	3	0	-13	0	0	multi-exon	FALSE	canonical	3	35	junction_2	1622.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGTGAGTGAATGTTTC	509	False	NA	3	True	ATTAAA	-33	NA	85678748	85676989	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85677192_85677423_85677493_85678135
H1_mix_00075487	chr6	-	379	4	FSM	ENSG00000203875.13	ENST00000667421.1	365	4	0	-14	0	0	multi-exon	FALSE	canonical	3	35	junction_2	1349.31348799635	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGTGAGTGAATGTTTC	509	False	NA	3	True	ATTAAA	-33	NA	85678748	85676989	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85677192_85677423_85677493_85678135_85678189_85678693
H1_mix_00075489	chr6	-	902	4	FSM	ENSG00000203875.13	ENST00000665270.1	902	4	0	0	0	0	multi-exon	FALSE	canonical	3	2201	junction_3	876.512914273879	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGCCTTGTAATCAAATTA	509	False	NA	-14	True	ATTAAA	-16	NA	85678748	85677006	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85677192_85677423_85678033_85678135_85678189_85678693
H1_mix_00075490	chr6	-	617	5	FSM	ENSG00000203875.13	ENST00000664198.1	600	5	0	-17	0	0	multi-exon	FALSE	canonical	3	2201	junction_4	791.364802098248	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGTGAGTGAATGTTTC	509	False	NA	3	True	ATTAAA	-33	NA	85678748	85676989	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85677192_85677423_85677493_85677794_85678033_85678135_85678189_85678693
H1_mix_00075491	chr6	-	1434	6	FSM	ENSG00000203875.13	ENST00000669678.1	518	6	12	-928	0	0	multi-exon	FALSE	canonical	3	83	junction_5	1521.47804453433	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTATGAAGGATTCTTGAAA	-6	True	NA	NA	False	AATAAA	-44	NA	85678736	85676078	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85677192_85677423_85677493_85677794_85677876_85677953_85678033_85678135_85678189_85678697
H1_mix_00075493	chr6	-	738	6	FSM	ENSG00000203875.13	ENST00000669824.1	738	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	1548.39767501763	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTCCTTTTTGTTATT	509	False	NA	-15	True	AATAAA	-16	NA	85678748	85677081	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85677192_85677423_85677493_85677794_85677876_85677953_85678033_85678135_85678189_85678402
H1_mix_00075494	chr6	-	457	6	FSM	ENSG00000203875.13	ENST00000623001.4	456	6	0	-1	0	0	multi-exon	FALSE	canonical	2	6	junction_3	1532.99140245469	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTATGTTCCTTTTTGTTA	-6	True	NA	-17	True	AATAAA	-14	NA	85678736	85677083	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85677192_85677423_85677493_85677794_85677900_85677953_85678033_85678135_85678189_85678693
H1_mix_00075495	chr6	-	4202	1	FSM	ENSG00000272008.1	ENST00000606274.1	4127	1	-72	-3	-72	3	mono-exon	FALSE	NA	NA	NA	NA	NA	912	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTATACATTGTTCTTT	711	False	NA	NA	False	AATAAA	-27	NA	87155357	87151155	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_87151200_87155400
H1_mix_00075496	chr6	-	2271	3	FSM	ENSG00000164411.12	ENST00000525899.6	2279	3	8	0	8	0	multi-exon	FALSE	canonical	3	15	junction_1	1	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTGGCTGTCATTGGTA	8	False	NA	NA	False	AATAAA	-21	NA	87329270	87282979	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_87284940_87322865_87323044_87329137
H1_mix_00075497	chr6	-	693	3	FSM	ENSG00000164411.12	ENST00000442973.2	674	3	0	-19	0	19	multi-exon	FALSE	canonical	3	5	junction_1	6	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCTGATTTGGGAAAGAAA	37	False	NA	NA	False	NA	NA	NA	87329241	87322263	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_87322675_87322865_87323044_87329137
H1_mix_00075498	chr6	-	2659	20	NIC	ENSG00000146282.19	novel	2437	22	NA	NA	0	11	intron_retention	TRUE	canonical	3	257	junction_19	117.637642608345	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCAATTTTCTTGTAATT	-8	True	NA	-1	True	AATAAA	-22	NA	87589987	87513741	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_87514500_87514956_87515021_87516805_87516881_87518168_87518265_87518629_87518740_87518823_87518892_87519582_87519708_87520179_87520257_87521463_87521525_87524556_87524653_87529541_87529649_87530783_87530943_87541917_87541995_87545615_87545700_87548590_87548647_87555407_87555506_87562701_87562786_87564129_87564233_87569516_87569591_87589700
H1_mix_00075499	chr6	-	2376	19	FSM	ENSG00000146282.19	ENST00000693327.1	2388	19	31	-19	1	0	multi-exon	FALSE	canonical	3	51	junction_14	187.682890226975	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTCATGGTCAGTAGGT	23	False	NA	-13	True	AATAAA	-14	NA	87589956	87513937	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_87514500_87514956_87515021_87516805_87516881_87518168_87518265_87518629_87518740_87518823_87518892_87519582_87519708_87520179_87520257_87521463_87521525_87524556_87524653_87529541_87529649_87530783_87530943_87541917_87541995_87545615_87545700_87555407_87555506_87562701_87562786_87564129_87564233_87569516_87569591_87589700
H1_mix_00075500	chr6	-	2242	20	FSM	ENSG00000146282.19	ENST00000369536.10	2242	20	0	0	0	0	multi-exon	FALSE	canonical	3	480	junction_19	80.3308946270297	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTCATGGTCAGTAGGT	-8	True	NA	-13	True	AATAAA	-14	NA	87589987	87513937	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_87514500_87514956_87515021_87516805_87516881_87518168_87518265_87518629_87518740_87518823_87518892_87519582_87519708_87520179_87520257_87521463_87521525_87524556_87524653_87529541_87529649_87530783_87530943_87541917_87541995_87545615_87545700_87548590_87548647_87555407_87555506_87562701_87562786_87564129_87564233_87569516_87569591_87589921
H1_mix_00075502	chr6	-	1898	5	FSM	ENSG00000135334.9	ENST00000257787.6	1898	5	0	0	0	0	multi-exon	FALSE	canonical	3	476	junction_3	18.9538914210249	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTTCCAGGAATCAGTG	24	True	NA	-12	True	AATAAA	-21	NA	87702233	87674859	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_87675608_87675859_87675932_87677817_87677968_87681619_87681764_87701449
H1_mix_00075504	chr6	-	4825	16	FSM	ENSG00000111880.16	ENST00000369485.9	4825	16	0	0	0	0	multi-exon	TRUE	canonical	3	188	junction_4	23.8523234367919	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGTCGTGAACTACCAAA	-13	True	NA	NA	False	AATAAA	-14	NA	88963618	88609896	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_88612883_88614271_88614396_88678352_88678420_88769773_88769875_88801563_88801633_88844356_88844522_88849754_88849827_88853628_88853765_88890494_88890597_88891805_88891916_88904714_88904956_88906364_88906441_88928984_88929074_88929163_88929268_88941070_88941181_88963345
H1_mix_00075505	chr6	-	4431	17	NNC	ENSG00000111880.16	novel	4825	16	NA	NA	0	-374	at_least_one_novel_splicesite	TRUE	non_canonical	3	75	junction_1	42.8277345157317	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAAGTGTATCTACTTTGT	-13	True	NA	-9	True	AATAAA	-19	NA	88963618	88610270	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_88611520_88611539_88612883_88614271_88614396_88678352_88678420_88769773_88769875_88801563_88801633_88844356_88844522_88849754_88849827_88853628_88853765_88890494_88890597_88891805_88891916_88904714_88904956_88906364_88906441_88928984_88929074_88929163_88929268_88941070_88941181_88963345
H1_mix_00075507	chr6	-	545	3	FSM	ENSG00000154548.9	ENST00000488604.1	693	3	148	0	-2	0	multi-exon	FALSE	canonical	3	150	junction_2	7.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCGATTTTCTTATAGCCAG	8796	False	NA	NA	False	AATATA	-38	NA	89105818	89098936	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_89098948_89105118_89105261_89105426
H1_mix_00075508	chr6	-	6593	8	FSM	ENSG00000198833.7	ENST00000435041.3	4164	8	-442	-1987	-442	1987	multi-exon	FALSE	canonical	3	207	junction_2	27.1263107460981	542	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAGGACCTAAAGTTGTC	10	False	NA	67	True	AGTAAA	-5	NA	89353164	89324637	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_89329958_89333085_89333206_89335301_89335432_89338204_89338311_89338458_89338544_89342323_89342456_89343682_89343757_89352538
H1_mix_00075509	chr6	-	6344	7	FSM	ENSG00000025039.15	ENST00000369415.9	4923	7	-196	-1225	-196	1225	multi-exon	FALSE	canonical	3	128	junction_3	16.6499916583229	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAGCCTCAAATCTAAT	NA	False	NA	NA	False	NA	NA	NA	89412469	89363390	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_89368208_89372436_89372586_89377670_89377814_89379223_89379339_89380167_89380368_89387294_89387591_89411845
H1_mix_00075510	chr6	-	5347	3	FSM	ENSG00000083099.11	ENST00000523377.2	5347	3	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	28	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCAGCATTTTATTACAA	-4	True	NA	2	True	AATAAA	-23	NA	89638747	89632223	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_89637354_89637741_89637883_89638671
H1_mix_00075511	chr6	-	1623	3	FSM	ENSG00000083099.11	ENST00000520318.1	677	3	-36	-910	-36	854	multi-exon	FALSE	canonical	3	66	junction_1	123	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTCATCAAAAAGATCACCA	NA	False	NA	NA	False	NA	NA	NA	89638785	89636002	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_89637354_89637724_89637883_89638671
H1_mix_00075512	chr6	-	721	3	FSM	ENSG00000083099.11	ENST00000524153.5	721	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	110	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAAAAATTAGCTTGGTG	-11	True	NA	NA	False	ACTAAA	-2	NA	89638486	89636856	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_89637354_89637741_89637883_89638403
H1_mix_00075513	chr6	-	18461	102	FSM	ENSG00000112159.12	ENST00000369393.8	18485	102	24	0	24	0	multi-exon	TRUE	canonical	2	14	junction_96	128.029459101428	3838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTTGCATCCCACTCAC	-16	True	NA	-9	True	TATAAA	-24	NA	89819770	89642497	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_89644194_89645014_89645158_89646539_89646604_89648031_89648147_89648255_89648330_89650023_89650199_89650731_89650848_89652191_89652282_89652991_89653156_89654163_89654335_89655763_89655969_89656699_89656802_89658208_89658371_89658609_89658918_89661430_89661579_89662086_89662240_89662791_89662968_89664486_89664629_89668013_89668152_89670918_89671081_89672199_89672364_89672546_89672703_89673235_89673463_89674103_89674590_89675463_89675580_89676101_89676208_89677569_89677697_89678598_89678746_89680588_89680752_89683131_89683331_89683830_89683905_89684875_89684986_89685826_89685974_89686901_89687024_89687343_89687439_89688077_89688174_89688572_89688809_89689869_89690144_89690672_89690835_89692442_89693149_89694073_89694184_89695604_89695993_89696359_89696575_89698864_89699036_89699600_89699728_89700062_89700295_89700645_89700857_89701557_89701679_89701903_89702062_89706058_89706193_89707360_89707477_89708495_89708629_89710680_89710795_89712035_89712257_89712574_89712787_89713147_89713297_89714542_89714752_89715652_89715770_89716649_89716810_89718365_89718628_89718766_89719031_89719135_89719226_89722954_89723144_89723511_89723620_89725198_89725397_89727832_89727956_89728930_89729140_89730725_89730924_89732556_89732776_89738325_89738456_89740233_89740379_89743149_89743281_89743575_89743715_89745272_89745412_89745491_89745627_89747328_89747471_89749222_89749370_89749542_89749752_89750353_89750533_89751430_89751583_89753511_89753623_89754082_89754231_89756276_89756391_89758254_89758352_89758815_89758961_89761644_89761749_89762318_89762531_89771560_89771622_89772572_89772722_89774620_89774734_89776599_89776696_89780211_89780294_89781398_89781593_89785011_89785127_89787853_89787958_89789779_89789912_89790158_89790402_89793761_89793955_89794099_89794208_89794576_89794802_89803327_89803555_89819505
H1_mix_00075515	chr6	-	9109	7	FSM	ENSG00000112182.15	ENST00000537989.5	9108	7	0	-1	0	0	multi-exon	FALSE	canonical	2	10	junction_6	3.53160335006952	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTCTGCCTCTGATCCC	118	False	NA	0	True	AATAAA	-28	NA	90296908	89926527	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_89932891_89938143_89938351_89950269_89951863_90008601_90008857_90088960_90089110_90206568_90206682_90296479
H1_mix_00075516	chr6	-	9015	7	FSM	ENSG00000112182.15	ENST00000343122.7	3981	7	-82	-4952	19	-4	multi-exon	FALSE	canonical	1	3	junction_6	5.3851648071345	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGATTTTCTCTGCCTCTG	1	True	NA	-5	True	AATAAA	-23	NA	90296824	89926532	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_89932891_89938143_89938351_89950269_89951863_90008601_90008857_90088960_90089110_90206568_90206677_90296479
H1_mix_00075518	chr6	-	4565	15	FSM	ENSG00000135341.18	ENST00000369327.7	4558	15	0	-7	0	7	multi-exon	TRUE	canonical	3	11	junction_1	107.048839702412	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTGAATGACTTGTATCA	342	False	NA	-22	True	AATAAA	-34	NA	90586889	90513565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_90516682_90519257_90519320_90523677_90523784_90536336_90536402_90547257_90547388_90548046_90548178_90550467_90550550_90552048_90552180_90553457_90553587_90556499_90556625_90560075_90560215_90561621_90561668_90568557_90568624_90571696_90571808_90586763
H1_mix_00075519	chr6	-	4837	16	FSM	ENSG00000135341.18	ENST00000369332.7	4830	16	0	-7	0	7	multi-exon	FALSE	canonical	3	325	junction_1	32.7342158740497	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTGAATGACTTGTATCA	15	True	NA	-22	True	AATAAA	-34	NA	90587045	90513565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_90516682_90518446_90518563_90519257_90519320_90523677_90523784_90536336_90536402_90547257_90547388_90548046_90548178_90550467_90550550_90552048_90552180_90553457_90553587_90556499_90556625_90560075_90560215_90561621_90561668_90568557_90568624_90571696_90571808_90586763
H1_mix_00075520	chr6	-	4945	17	FSM	ENSG00000135341.18	ENST00000369329.8	4932	17	0	-13	0	7	multi-exon	FALSE	canonical	3	48	junction_6	123.824724913888	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTGAATGACTTGTATCA	-12	True	NA	-22	True	AATAAA	-34	NA	90587072	90513565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_90516682_90518446_90518563_90519257_90519320_90523677_90523784_90536336_90536402_90544551_90544633_90547257_90547388_90548046_90548178_90550467_90550550_90552048_90552180_90553457_90553587_90556499_90556625_90560075_90560215_90561621_90561668_90568557_90568624_90571696_90571808_90586763
H1_mix_00075521	chr6	-	2214	5	FSM	ENSG00000135341.18	ENST00000479630.1	2214	5	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_1	44.8636824168503	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAATGAAGAAA	NA	False	NA	28	True	NA	NA	NA	90537218	90515633	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_90516682_90518446_90518563_90519257_90519320_90523677_90523784_90536336
H1_mix_00075522	chr6	-	2750	16	NNC	ENSG00000135341.18	novel	4932	17	NA	NA	6	-11	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_12	99.0420785996201	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGCTTAAATGATCATTT	-6	True	NA	-32	True	ATTAAA	-17	NA	90587066	90515693	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_90516682_90518446_90518563_90519257_90519320_90523677_90523784_90536336_90536402_90547257_90547388_90548046_90548178_90550467_90550550_90552048_90552180_90553457_90553587_90556499_90556625_90560075_90560235_90561621_90561668_90568557_90568624_90571696_90571808_90586763
H1_mix_00075523	chr6	-	6621	17	FSM	ENSG00000135333.15	ENST00000369303.9	6621	17	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_10	6.92707550124871	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTCTCCAATCATTGGT	-4	True	NA	NA	False	AATAAA	-28	NA	93419559	93240019	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_93243541_93245297_93245454_93246791_93246986_93254646_93254797_93255827_93256038_93257461_93257524_93258098_93258285_93259353_93259480_93263859_93263916_93264593_93264703_93269476_93269661_93272297_93272423_93356716_93357053_93358255_93358412_93410500_93411171_93414702_93414768_93419244
H1_mix_00075524	chr6	-	6629	17	FSM	ENSG00000135333.15	ENST00000680224.1	6620	17	4	-13	4	-5	multi-exon	FALSE	canonical	3	4	junction_8	8.63495801958527	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATCCTGTCTCCAATCA	3	True	NA	NA	False	AATAAA	-23	NA	93419584	93240024	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_93243541_93245297_93245454_93246791_93246986_93254646_93254797_93255827_93256038_93257461_93257524_93258098_93258285_93259353_93259468_93263859_93263916_93264593_93264703_93269476_93269661_93272297_93272423_93356716_93357053_93358255_93358412_93410500_93411171_93414702_93414768_93419244
H1_mix_00075525	chr6	-	1939	8	FSM	ENSG00000135333.15	ENST00000679915.1	2244	8	0	305	0	-305	multi-exon	FALSE	canonical	2	6	junction_1	7.90763000177031	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGAACACAAAGTTGTTCT	2	True	NA	NA	False	NA	NA	NA	93419553	93264593	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_93264703_93269491_93269661_93272297_93272423_93356716_93357053_93358255_93358412_93410500_93411171_93414702_93414768_93419244
H1_mix_00075526	chr6	-	5583	3	Antisense	novelGene_ENSG00000280451.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	366	junction_2	18.5	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATACAACATTAATCTTG	NA	False	NA	NA	False	NA	NA	NA	93835396	93811778	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr6_-_93817014_93833261_93833364_93835150
H1_mix_00075528	chr6	-	842	7	Antisense	novelGene_ENSG00000219627.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	25	junction_3	8.9333955221716	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTAGCTGTCAGTCAA	NA	False	NA	NA	False	AATAAA	-17	NA	95517182	95117401	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr6_-_95117662_95154067_95154186_95178054_95178171_95254087_95254187_95485449_95485549_95514090_95514145_95517086
H1_mix_00075529	chr6	-	703	6	Antisense	novelGene_ENSG00000219627.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	16.6180624622728	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTAGCTGTCAGTCAAGT	NA	False	NA	NA	False	AATAAA	-19	NA	95517157	95117399	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr6_-_95117662_95154067_95154186_95254087_95254187_95485449_95485549_95514090_95514145_95517086
H1_mix_00075530	chr6	-	3019	3	Genic_Genomic	ENSG00000261366.1	novel	2268	1	NA	NA	-6	17606	multi-exon	FALSE	canonical	3	20	junction_1	2.5	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAGTCTCAGAAGTCTGA	NA	False	NA	NA	False	AATATA	-31	NA	95577456	95557576	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr6_-_95560146_95567227_95567314_95577092
H1_mix_00075531	chr6	-	2397	1	FSM	ENSG00000261366.1	ENST00000564541.1	2268	1	16	-145	16	145	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGCCAGTGTAAATAAATTA	-3	True	NA	NA	False	NA	NA	NA	95577434	95575037	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_95575000_95577400
H1_mix_00075534	chr6	-	2411	3	FSM	ENSG00000123545.6	ENST00000316149.8	2407	3	0	-4	0	4	multi-exon	FALSE	canonical	3	953	junction_1	16	273	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTCCTATACTGCGTTTT	-36	True	NA	1	True	AATAAA	-23	NA	96897891	96889310	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_96891392_96896743_96896848_96897665
H1_mix_00075535	chr6	-	8643	25	FSM	ENSG00000146263.12	ENST00000275053.8	8643	25	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_24	25.712317357424	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGCCCTTGATTATTG	16	True	NA	-7	True	AATAAA	-18	NA	97283176	97142160	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_97146888_97149852_97150021_97151770_97151868_97162001_97162166_97165245_97165458_97168070_97168241_97173062_97173223_97178442_97178586_97179407_97179560_97181903_97182055_97186496_97186691_97228893_97229404_97231425_97231653_97233860_97233981_97246627_97246691_97254556_97254734_97263334_97263449_97267871_97268003_97269901_97269993_97272703_97272882_97272974_97273063_97278848_97278899_97281236_97281363_97282313_97282554_97282986
H1_mix_00075536	chr6	-	8574	25	FSM	ENSG00000146263.12	ENST00000683635.1	8574	25	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_15	25.1368131432765	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGCCCTTGATTATTG	-24	True	NA	-7	True	AATAAA	-18	NA	97283216	97142160	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_97146888_97149852_97150021_97151770_97151868_97162001_97162166_97165245_97165458_97168070_97168241_97173062_97173223_97178442_97178586_97179407_97179560_97181903_97182055_97186496_97186691_97228893_97229404_97231425_97231653_97233860_97233981_97246627_97246691_97254556_97254734_97263334_97263449_97267871_97268003_97269901_97269993_97272703_97272882_97272974_97273063_97278848_97278899_97281236_97281363_97282313_97282554_97283095
H1_mix_00075537	chr6	-	4644	10	NNC	ENSG00000146263.12	novel	5907	7	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	22.261077142752	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGTCAGGTTTGTCTGT	-13	True	NA	-4	True	AATAAA	-15	NA	97283205	97258662	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_97262179_97263334_97263449_97267871_97268003_97269901_97269993_97272703_97272882_97272974_97273063_97278848_97278899_97281236_97281363_97282313_97282554_97283095
H1_mix_00075539	chr6	-	1815	2	Antisense	novelGene_ENSG00000271860.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATATGTGTTAATTAAAG	NA	False	NA	NA	False	AATAAA	-38	NA	97782010	97773943	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr6_-_97775730_97781981
H1_mix_00075541	chr6	-	8061	9	FSM	ENSG00000112234.9	ENST00000229971.2	2810	9	60	-5311	0	121	multi-exon	TRUE	canonical	3	29	junction_8	12.3332629502496	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGAACTCTTTTTTTTTT	10	True	NA	NA	False	NA	NA	NA	98947946	98868413	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_98874442_98875414_98875728_98880552_98880625_98899267_98899482_98905425_98905671_98917373_98917720_98926476_98927061_98927704_98927823_98947805
H1_mix_00075542	chr6	-	7798	8	NIC	ENSG00000112234.9	novel	8058	10	NA	NA	70	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	20.232324107119	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCACTTTCAAAATTGATC	-5	True	NA	-11	True	AATAAA	-22	NA	98947876	98868534	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_98874442_98875414_98875728_98899267_98899482_98905425_98905671_98917373_98917720_98926476_98927061_98927704_98927823_98947805
H1_mix_00075543	chr6	-	11516	6	FSM	ENSG00000146267.12	ENST00000389677.6	11528	6	0	12	0	-12	multi-exon	FALSE	canonical	0	0	junction_1	35.4705511657206	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGCTGCCATTTGTACT	-3	True	NA	NA	False	AATACA	-2	NA	99349674	99271179	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_99281454_99291703_99291821_99323443_99323668_99333350_99333548_99342897_99343034_99349106
H1_mix_00075544	chr6	-	1412	6	NNC	ENSG00000146267.12	novel	11528	6	NA	NA	-111	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.4774598925808	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAACGAACACCTACTATG	10	True	NA	-52	True	AATAAA	-12	NA	99349785	99280668	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_99281454_99291703_99291821_99333350_99333548_99342897_99343034_99349106_99349229_99349730
H1_mix_00075545	chr6	-	1333	7	FSM	ENSG00000132423.12	ENST00000254759.8	1325	7	0	-8	0	8	multi-exon	FALSE	canonical	3	243	junction_3	28.5292247820838	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGGAGTGTAAGTTCCTC	-7	True	NA	1	True	AATAAA	-25	NA	99394195	99369392	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_99369821_99371427_99371588_99375939_99376183_99377385_99377486_99380188_99380342_99383697_99383825_99394073
H1_mix_00075547	chr6	-	4972	12	FSM	ENSG00000132424.17	ENST00000681615.1	5243	12	0	271	0	150	multi-exon	FALSE	canonical	3	84	junction_11	208.336385652571	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTACTGTATTTGGGAAT	NA	False	NA	NA	False	AGTAAA	-5	NA	99425329	99397899	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_99400312_99400543_99401631_99402539_99402711_99403828_99403883_99404602_99404703_99406030_99406169_99408080_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99425214
H1_mix_00075548	chr6	-	5113	12	FSM	ENSG00000132424.17	ENST00000369239.10	5113	12	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_3	111.500731939932	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGTGTATATGTTTTCTG	-14	True	NA	0	True	AATAAA	-18	NA	99425308	99398049	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_99401631_99402539_99402711_99403828_99403883_99404602_99404703_99406030_99406169_99408080_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99416348_99416429_99425214
H1_mix_00075551	chr6	-	2880	12	NIC	ENSG00000132424.17	novel	5113	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_3	201.280816130472	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	19	True	NA	-12	True	AATAAA	-25	NA	99425275	99399963	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_99400312_99400543_99401631_99402539_99402711_99404602_99404703_99406030_99406169_99408080_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99416348_99416429_99425214
H1_mix_00075552	chr6	-	2925	13	NIC	ENSG00000132424.17	novel	5113	12	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	444	junction_4	123.735941962444	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	28	False	NA	-12	True	AATAAA	-25	NA	99425266	99399963	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_99400312_99400543_99401631_99402539_99402711_99403828_99403883_99404602_99404703_99406030_99406169_99408080_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99416348_99416429_99425214
H1_mix_00075553	chr6	-	2922	13	NIC	ENSG00000132424.17	novel	5189	13	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	171	junction_11	182.935078799982	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	27	False	NA	-12	True	AATAAA	-25	NA	99425267	99399963	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_99400312_99400543_99401631_99402539_99402711_99403828_99403883_99404602_99404703_99406030_99406169_99408080_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414687_99416348_99416429_99425214
H1_mix_00075557	chr6	-	5612	16	NIC	ENSG00000123552.18	novel	5878	18	NA	NA	0	31	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	43.8421410669385	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGACAGAATGTTTTATCA	5198	False	NA	19	True	NA	NA	NA	99510230	99432404	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_99435847_99439768_99439856_99443564_99443663_99445796_99446464_99464603_99464748_99465079_99465137_99466671_99466764_99468536_99468619_99476142_99476231_99482752_99482884_99488199_99488296_99488680_99488821_99503764_99503866_99507427_99507532_99508609_99508783_99510120
H1_mix_00075561	chr6	-	2101	7	ISM	ENSG00000123552.18	ENST00000329966.10	1444	8	5260	-756	1	756	3prime_fragment	FALSE	canonical	3	121	junction_3	15.6276108929747	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTACTAGGTCATTGTA	5199	False	NA	NA	False	AATAAA	-20	NA	99510229	99481505	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_99482884_99488199_99488296_99488680_99488821_99503764_99503866_99507427_99507532_99508609_99508783_99510120
H1_mix_00075563	chr6	-	1397	8	FSM	ENSG00000123552.18	ENST00000329966.10	1444	8	47	0	-19	0	multi-exon	FALSE	canonical	3	81	junction_7	25.0199920063936	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTAATGCATTCATGTAT	-14	True	NA	-5	True	AATAAA	-21	NA	99515442	99482261	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_99482884_99488199_99488296_99488680_99488821_99503764_99503866_99507427_99507532_99508609_99508783_99510120_99510231_99515391
H1_mix_00075565	chr6	-	2186	13	FSM	ENSG00000112237.13	ENST00000520371.5	2186	13	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	488.304947980483	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTGATGCACAATTTAAG	98	False	NA	-45	True	AATAAA	-16	NA	99568713	99542501	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_99543610_99544178_99544274_99545111_99545231_99546394_99546475_99549507_99549576_99550217_99550310_99550992_99551029_99551839_99551896_99558496_99558549_99561366_99561437_99561596_99561682_99562841_99562949_99568495
H1_mix_00075567	chr6	-	1582	12	FSM	ENSG00000112237.13	ENST00000484049.6	1412	12	0	-170	0	-135	multi-exon	FALSE	canonical	3	9	junction_7	534.439460734406	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGGAGAGCAGGGTCCAA	12	True	NA	NA	False	TATAAA	-26	NA	99568652	99543609	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_99544274_99545111_99545231_99546394_99546475_99549507_99549576_99550217_99550310_99550992_99551029_99551839_99551896_99558500_99558549_99561366_99561437_99561596_99561682_99562841_99562949_99568495
H1_mix_00075568	chr6	-	1596	12	FSM	ENSG00000112237.13	ENST00000518714.5	1426	12	0	-170	0	-135	multi-exon	FALSE	canonical	3	149	junction_1	380.711838707744	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGGAGAGCAGGGTCCAA	2	True	NA	NA	False	TATAAA	-26	NA	99568662	99543609	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_99544274_99545111_99545231_99546394_99546475_99549507_99549576_99550217_99550310_99550992_99551029_99551839_99551896_99558496_99558549_99561366_99561437_99561596_99561682_99562841_99562949_99568495
H1_mix_00075570	chr6	-	8111	42	FSM	ENSG00000112249.14	ENST00000369162.7	8111	42	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_28	52.2208051696252	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGGTTGCAGGGGAACCA	26	True	NA	NA	False	AATAAA	-18	NA	100881329	100508193	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_100509534_100509931_100510108_100512708_100512919_100516179_100516328_100517990_100518143_100540162_100540388_100589633_100589769_100589947_100590060_100601809_100601936_100605567_100605701_100606739_100606861_100606950_100607089_100625191_100625335_100627589_100627711_100627841_100627988_100629014_100629182_100631127_100631214_100638600_100638822_100642580_100642750_100644030_100644130_100646614_100646770_100647225_100647452_100650537_100650715_100651559_100651647_100652724_100652890_100655698_100655819_100661805_100662031_100662344_100662537_100679617_100679753_100715461_100715534_100718074_100718252_100725538_100725704_100766564_100766706_100767144_100767346_100798712_100798839_100799430_100799573_100800299_100800505_100805759_100805881_100848147_100848708_100864063_100864215_100867907_100868039_100881060
H1_mix_00075572	chr6	-	2763	13	FSM	ENSG00000112249.14	ENST00000522650.5	2828	13	0	65	0	-65	multi-exon	FALSE	canonical	3	124	junction_1	58.1468447601033	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCAATATCAATTGAAATG	-9	True	NA	NA	False	TTTAAA	-25	NA	100881364	100715194	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_100715534_100718074_100718252_100725538_100725704_100766564_100766706_100767144_100767346_100798712_100798839_100799430_100799573_100800299_100800505_100805759_100805881_100848147_100848708_100864063_100864215_100867907_100868039_100881060
H1_mix_00075573	chr6	-	852	4	FSM	ENSG00000112249.14	ENST00000324723.10	852	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	132.114428516427	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACTTTGACGAACTGCCA	7	True	NA	NA	False	NA	NA	NA	100881348	100848419	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_100848708_100864063_100864215_100867907_100868033_100881060
H1_mix_00075574	chr6	-	3433	4	FSM	ENSG00000112249.14	ENST00000369143.2	3433	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	123.828734773297	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTATTTTTATATTTGTG	-14	True	NA	-11	True	AATAAA	-20	NA	100881311	100856302	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_100859203_100864063_100864215_100867907_100868039_100881060
H1_mix_00075575	chr6	-	4475	24	NIC	ENSG00000085382.12	novel	4575	24	NA	NA	45	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	30.3533070919425	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTGGCTTATGTCTGT	48	False	NA	-1	True	AATAAA	-16	NA	104859832	104728093	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_104729765_104730302_104730417_104744159_104744231_104744511_104744611_104750340_104750473_104771192_104771390_104771924_104772075_104776740_104776829_104777012_104777098_104777205_104777318_104784085_104784174_104784416_104784486_104784984_104785320_104791503_104791655_104795578_104795686_104796654_104796757_104796928_104797026_104811310_104811394_104833041_104833174_104843222_104843299_104849141_104849247_104850906_104850997_104852316_104852372_104859566
H1_mix_00075577	chr6	-	1866	13	FSM	ENSG00000085382.12	ENST00000517424.1	1866	13	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_9	35.7976566582538	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGTTTTCTCCTAATTTC	NA	False	NA	NA	False	NA	NA	NA	104785198	104729317	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_104729765_104730302_104730417_104744159_104744231_104744511_104744611_104750340_104750473_104771192_104771390_104771924_104772075_104776740_104776829_104777012_104777098_104777205_104777318_104784085_104784174_104784416_104784486_104784984
H1_mix_00075579	chr6	-	1789	3	FSM	ENSG00000203809.7	ENST00000636682.1	1797	3	0	8	0	-8	multi-exon	FALSE	canonical	2	2	junction_2	3	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTATATACTTATAATTA	106	False	NA	NA	False	AATATA	-10	NA	104941263	104935213	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_104936683_104940177_104940214_104940979
H1_mix_00075580	chr6	-	5550	8	FSM	ENSG00000112276.14	ENST00000314641.10	5550	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	4.22335585688414	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTATTTTTTATTTCA	35	True	NA	4	True	AATAAA	-17	NA	105137157	105096821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_105101214_105115685_105115828_105116700_105116869_105124546_105124656_105125390_105125579_105129378_105129504_105133351_105133589_105136968
H1_mix_00075581	chr6	-	1663	8	FSM	ENSG00000112276.14	ENST00000336775.9	1663	8	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_7	6.52154983457904	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACACACACACACACACACA	507	False	NA	NA	False	AAAAAG	-29	NA	105136685	105100612	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_105101214_105115685_105115828_105116700_105116869_105124546_105124656_105125390_105125579_105129378_105129504_105133351_105133589_105136592
H1_mix_00075582	chr6	-	1394	4	FSM	ENSG00000132429.10	ENST00000474760.1	1029	4	4	-369	4	-91	multi-exon	FALSE	canonical	3	36	junction_2	4.49691252107735	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CGACTAAAAAGTAGAATAAA	-25	True	NA	NA	False	TTTAAA	-18	NA	105179991	105157990	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_105158752_105159710_105159820_105161795_105162161_105179832
H1_mix_00075583	chr6	-	7249	15	FSM	ENSG00000085377.15	ENST00000652536.2	7250	15	0	1	0	-1	multi-exon	FALSE	canonical	3	293	junction_5	27.0962946484103	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACCCTTTCTGGATGAGT	3	True	NA	NA	False	AATAAA	-15	NA	105403082	105273218	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_105278439_105281745_105281903_105282450_105282583_105285485_105285581_105288757_105288895_105323664_105323769_105328828_105329027_105333313_105333506_105352971_105353078_105368902_105369025_105373368_105373579_105376124_105376256_105377385_105377520_105397852_105397928_105402846
H1_mix_00075584	chr6	-	2362	11	NIC	ENSG00000085377.15	novel	961	2	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_1	91.139673029916	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTGCTGCTTATTTTG	6	True	NA	0	True	AATAAA	-28	NA	105403079	105322254	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_105323112_105323664_105323769_105328828_105329027_105333313_105333506_105352971_105353078_105368902_105369025_105373368_105373579_105376124_105376256_105377385_105377520_105397852_105397928_105402846
H1_mix_00075585	chr6	-	3088	7	FSM	ENSG00000057663.16	ENST00000369070.5	3088	7	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_5	111.613917889601	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTCCGTCTTTATTT	-11	True	NA	NA	False	AATAAA	-1	NA	106325791	106184475	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_106186677_106201971_106202090_106248149_106248245_106279660_106279824_106293027_106293107_106316100_106316267_106325525
H1_mix_00075586	chr6	-	3185	8	FSM	ENSG00000057663.16	ENST00000369076.8	3185	8	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_5	52.5869542291816	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTCCGTCTTTATTT	20	True	NA	NA	False	AATAAA	-1	NA	106325760	106184475	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_106186677_106201971_106202090_106248149_106248245_106279660_106279824_106293027_106293107_106308363_106308492_106316100_106316267_106325525
H1_mix_00075589	chr6	-	2513	3	FSM	ENSG00000272398.6	ENST00000619133.4	2513	3	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_2	2724	5088	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCATTTTAAGTTTTTC	-6	True	NA	-21	True	AATAAA	-22	NA	106975465	106969830	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_106971835_106974577_106974755_106975133
H1_mix_00075591	chr6	-	6389	5	NNC	ENSG00000178409.14	novel	6446	4	NA	NA	143	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	74.5331302173738	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTCTCGTAACATGTTAT	825	False	NA	-42	True	TATAAA	-22	NA	107115372	107065180	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_107070951_107098550_107098754_107099248_107099297_107104427_107104513_107115089
H1_mix_00075592	chr6	-	3538	8	FSM	ENSG00000164494.12	ENST00000369037.9	3536	8	0	-2	0	2	multi-exon	FALSE	canonical	3	49	junction_2	10.5926428068095	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCAGGTTTGTTTTATT	0	True	NA	-3	True	ATTAAA	-19	NA	107459564	107152559	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_107154778_107193821_107193855_107210438_107210571_107212108_107212283_107245547_107245620_107274028_107274228_107334197_107334333_107458989
H1_mix_00075593	chr6	-	1238	4	FSM	ENSG00000164494.12	ENST00000369031.4	1236	4	0	-2	0	2	multi-exon	FALSE	canonical	3	26	junction_1	20.9814733091416	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTGTCTTATCTGTTA	0	True	NA	0	True	AATAAA	-17	NA	107459564	107264183	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_107264513_107274028_107274228_107334197_107334333_107458989
H1_mix_00075594	chr6	-	6430	21	FSM	ENSG00000025796.14	ENST00000369002.9	6430	21	0	0	0	0	multi-exon	TRUE	canonical	3	420	junction_10	44.163870980701	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTCTGATTTGG	-17	True	NA	2	True	AATAAA	-19	NA	107958208	107867755	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_107871848_107872807_107872913_107876563_107876663_107881148_107881251_107882987_107883147_107893481_107893656_107893837_107893898_107897648_107897732_107901369_107901518_107902843_107902999_107904628_107904722_107906447_107906581_107906682_107906778_107908926_107909036_107911345_107911397_107912715_107912775_107913365_107913428_107921796_107921910_107924817_107924933_107929414_107929515_107957885
H1_mix_00075597	chr6	-	1291	1	FSM	ENSG00000225093.1	ENST00000417878.1	1212	1	-16	-63	-16	63	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAAAGTGGCTGTGTCT	10	False	NA	NA	False	AATAAA	-24	NA	108005584	108004293	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_108004300_108005600
H1_mix_00075599	chr6	-	4302	7	NIC	ENSG00000081087.15	novel	4471	6	NA	NA	-49	84	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	86.5937193000868	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAATCTGCTGGGTGTG	NA	False	NA	NA	False	GATAAA	-10	NA	108074790	108041324	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_108042265_108042566_108044841_108049252_108049419_108051030_108051199_108054489_108054588_108064184_108064300_108074249
H1_mix_00075600	chr6	-	4471	6	FSM	ENSG00000081087.15	ENST00000193322.8	4471	6	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_1	28.2658804922118	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACTGATCCATGCTTCT	-6	True	NA	46	True	ATTAAA	-20	NA	108074741	108041408	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_108044841_108049252_108049419_108051030_108051199_108054489_108054588_108064184_108064300_108074249
H1_mix_00075601	chr6	-	1540	4	FSM	ENSG00000112335.15	ENST00000230085.13	1535	4	0	-5	0	5	multi-exon	FALSE	canonical	3	829	junction_1	81.8711725144381	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCCTATTTTTCAGAAG	-21	True	NA	-8	True	ATTAAA	-25	NA	108261040	108211216	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_108212255_108214497_108214623_108222949_108223046_108260759
H1_mix_00075602	chr6	-	259	1	FSM	ENSG00000228834.1	ENST00000447543.1	259	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGAAGAGGACACGCTCT	16	False	NA	NA	False	NA	NA	NA	108907873	108907614	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_108907600_108907900
H1_mix_00075603	chr6	-	6390	10	FSM	ENSG00000080546.14	ENST00000436639.7	5664	10	-259	-467	-259	467	multi-exon	FALSE	canonical	3	19	junction_9	28.6296056729333	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATGGTCACCCAGAGTG	34	False	NA	NA	False	AATAAA	-11	NA	109095105	108983841	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_108987631_108988542_108988688_108990644_108990836_108992786_108992900_108994461_108994610_108998512_108998756_109000490_109000674_109001287_109001489_109002277_109002344_109093794
H1_mix_00075604	chr6	-	2678	10	FSM	ENSG00000080546.14	ENST00000356644.7	2676	10	3	-5	3	5	multi-exon	FALSE	canonical	3	87	junction_8	9.6148034012373	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGTCTCAATCTCTTA	-23	True	NA	0	True	AATAAA	-23	NA	109009552	108986436	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_108987631_108988542_108988688_108990644_108990836_108992786_108992900_108994461_108994610_108998512_108998756_109000490_109000674_109001287_109001489_109002277_109002344_109009358
H1_mix_00075607	chr6	-	2943	5	FSM	ENSG00000135535.17	ENST00000324953.9	2936	5	0	-7	0	3	multi-exon	FALSE	canonical	3	145	junction_1	342.741155976343	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTACTGCGTTTTGCTT	0	True	NA	2	True	AATAAA	-25	NA	109382444	109366510	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_109369018_109376073_109376113_109377899_109377972_109379578_109379663_109382203
H1_mix_00075608	chr6	-	3023	6	FSM	ENSG00000135535.17	ENST00000310786.10	3020	6	0	-3	0	3	multi-exon	FALSE	canonical	3	864	junction_2	51.1570132044473	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTACTGCGTTTTGCTT	2	True	NA	2	True	AATAAA	-25	NA	109382467	109366510	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_109369018_109370410_109370468_109376073_109376113_109377899_109377972_109379578_109379663_109382203
H1_mix_00075610	chr6	-	778	6	FSM	ENSG00000135535.17	ENST00000506649.5	778	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	364.127120659805	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATCATTGTGTTCAACA	1016	False	NA	-45	True	AAGAAA	-8	NA	109381901	109368683	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_109369018_109370410_109370468_109376073_109376113_109377899_109377972_109379578_109379663_109381709
H1_mix_00075612	chr6	-	3585	8	FSM	ENSG00000185250.16	ENST00000521072.7	3585	8	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	6.1145527311522	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGTAGCCTCAGAGCTTG	-11	True	NA	NA	False	AATAAA	-21	NA	109440628	109390214	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_109392938_109400034_109400171_109419186_109419244_109426846_109426995_109427093_109427157_109431156_109431346_109436103_109436200_109440455
H1_mix_00075613	chr6	-	3142	24	FSM	ENSG00000135596.18	ENST00000358577.7	3142	24	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_17	59.137755301325	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCGTTCACACCGCCTACA	2	True	NA	-4	True	ATTAAA	-17	NA	109455742	109444061	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_109444340_109444724_109444799_109444895_109444996_109445196_109445291_109445415_109445530_109445770_109445863_109446135_109446413_109446695_109446773_109447072_109447230_109447356_109447441_109447680_109447723_109447874_109447964_109448202_109448394_109448731_109448880_109449399_109449482_109449656_109449784_109449969_109450086_109451599_109451701_109452245_109452402_109452510_109452616_109453262_109453368_109453637_109453846_109453938_109454240_109455718
H1_mix_00075614	chr6	-	3430	25	FSM	ENSG00000135596.18	ENST00000358807.8	3430	25	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_24	47.479801992239	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCGTTCACACCGCCTACA	-28	True	NA	-4	True	ATTAAA	-17	NA	109455772	109444061	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_109444340_109444724_109444799_109444895_109444996_109445196_109445291_109445415_109445530_109445770_109445863_109446135_109446413_109446695_109446773_109447072_109447230_109447356_109447441_109447680_109447723_109447874_109447964_109448202_109448394_109448731_109448880_109449399_109449482_109449656_109449784_109449969_109450086_109450299_109450558_109451599_109451701_109452245_109452402_109452510_109452616_109453262_109453368_109453637_109453846_109453938_109454240_109455718
H1_mix_00075615	chr6	-	568	3	FSM	ENSG00000135596.18	ENST00000483856.1	568	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	68.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTACTGTCCCCTGCCCTGT	3856	False	NA	NA	False	NA	NA	NA	109452531	109451728	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_109452120_109452245_109452402_109452510
H1_mix_00075617	chr6	-	5501	7	FSM	ENSG00000112365.5	ENST00000230122.4	5501	7	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_5	13.1328680120613	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCTCATTATAAATGCTT	13	True	NA	NA	False	ATTAAA	-22	NA	109483219	109462593	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_109466575_109467652_109467735_109475398_109475483_109476174_109476259_109476762_109476931_109481074_109482055_109483097
H1_mix_00075618	chr6	-	5469	6	NNC	ENSG00000112365.5	novel	5501	7	NA	NA	-93	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_4	48.9138017332532	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCTCATTATAAATGCTT	NA	False	NA	NA	False	ATTAAA	-22	NA	109483312	109462593	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_109466575_109467652_109467735_109475398_109475483_109476174_109476259_109481074_109482055_109483054
H1_mix_00075619	chr6	-	1224	2	ISM	ENSG00000112365.5	ENST00000230122.4	5501	7	2	18357	2	-18357	5prime_fragment	FALSE	canonical	3	172	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCAGTTAATTTTCTCC	15	True	NA	-6	True	AATAAA	-15	NA	109483217	109480950	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_109482055_109483097
H1_mix_00075622	chr6	-	2675	9	FSM	ENSG00000112290.13	ENST00000392587.6	2675	9	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_8	63.0634601017102	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTGTTGCTCTTTGAA	312	False	NA	-4	True	AATAAA	-19	NA	110179702	110099818	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_110100680_110101587_110102217_110103377_110103558_110105406_110105580_110107076_110107195_110108527_110108682_110113325_110113461_110127468_110127630_110179438
H1_mix_00075623	chr6	-	3124	10	FSM	ENSG00000112290.13	ENST00000392588.5	3122	10	0	-2	0	2	multi-exon	FALSE	canonical	3	34	junction_8	150.676253382321	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTTGCTCTTTGAATA	10	True	NA	-2	True	AATAAA	-21	NA	110180004	110099816	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_110100680_110101587_110102217_110103377_110103558_110105406_110105580_110107076_110107195_110108527_110108682_110113325_110113461_110127468_110127630_110178597_110178743_110179438
H1_mix_00075624	chr6	-	3077	10	FSM	ENSG00000112290.13	ENST00000359451.6	3075	10	0	-2	0	2	multi-exon	FALSE	canonical	3	66	junction_9	129.680043107052	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTTGCTCTTTGAATA	10	True	NA	-2	True	AATAAA	-21	NA	110180004	110099816	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_110100680_110101587_110102217_110103377_110103558_110105406_110105580_110107076_110107195_110108527_110108682_110113325_110113461_110127468_110127630_110160634_110160733_110179438
H1_mix_00075627	chr6	-	6117	14	NIC	ENSG00000155111.15	novel	6067	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	4.2870383978747	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTGTGGATTTTTTAA	7	True	NA	-1	True	AATAAA	-16	NA	110815125	110609977	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_110614667_110621103_110621371_110622087_110622167_110622814_110622913_110623289_110623363_110626775_110626846_110627001_110627146_110632029_110632162_110638648_110638707_110667433_110667575_110670430_110670542_110746125_110746202_110773875_110773938_110815008
H1_mix_00075629	chr6	-	1292	2	FSM	ENSG00000155111.15	ENST00000468997.5	1083	2	-209	0	-125	0	multi-exon	FALSE	canonical	3	15	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTTTTTGAGTGAAATT	520	False	NA	NA	False	AATAAA	-19	NA	110815334	110813158	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_110814125_110815008
H1_mix_00075630	chr6	-	10708	32	FSM	ENSG00000009413.16	ENST00000368802.8	10706	32	0	-2	0	0	multi-exon	FALSE	canonical	2	4	junction_24	5.95735801040192	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGTGACTTCATCTTTT	-7	True	NA	-13	True	AATAAA	-16	NA	111483218	111299030	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_111300157_111307360_111307571_111309852_111310100_111311068_111311260_111313351_111313490_111315266_111315382_111322568_111322679_111329531_111329739_111331675_111331785_111333122_111333368_111335468_111335611_111343924_111344044_111349217_111349337_111351675_111351792_111357013_111357126_111358821_111359015_111363852_111363979_111365264_111365345_111367114_111368029_111372595_111376758_111377700_111377844_111379981_111380220_111381324_111381445_111387764_111387914_111388000_111388086_111389105_111389211_111390085_111390181_111392875_111392973_111405469_111405631_111411479_111411555_111416282_111416473_111482749
H1_mix_00075631	chr6	-	6328	9	FSM	ENSG00000056972.20	ENST00000368761.11	5833	9	-564	69	-164	-69	multi-exon	FALSE	canonical	3	55	junction_5	5.85234995535981	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAAAAATTATTACTGTT	NA	False	NA	-70	True	NA	NA	NA	111606442	111555449	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_111559552_111562964_111563040_111566443_111566561_111567623_111567693_111572894_111572984_111575642_111575822_111580196_111580390_111591257_111592095_111605775
H1_mix_00075632	chr6	-	3234	14	FSM	ENSG00000010810.17	ENST00000368682.7	3234	14	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_5	94.5419352181502	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTTTATTTGT	607	False	NA	2	True	ATTAAA	-23	NA	111873067	111660331	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_111661948_111674498_111674631_111694374_111694529_111694627_111694705_111696276_111696457_111699514_111699671_111702884_111703035_111703998_111704103_111707921_111708021_111714346_111714444_111719804_111720063_111780565_111780636_111846588_111846630_111872967
H1_mix_00075633	chr6	-	3566	13	NIC	ENSG00000010810.17	novel	3234	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	78	junction_12	122.195426355581	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTTTATTTGT	-1	True	NA	2	True	ATTAAA	-23	NA	111873440	111660331	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_111661948_111674498_111674631_111694374_111694529_111694627_111694705_111696276_111696457_111699514_111699671_111702884_111703035_111703998_111704103_111707921_111708021_111714346_111714444_111719804_111720063_111780565_111780636_111872967
H1_mix_00075634	chr6	-	3628	14	FSM	ENSG00000010810.17	ENST00000354650.7	3628	14	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_6	76.1878711867993	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTTTATTTGT	-13	True	NA	2	True	ATTAAA	-23	NA	111873452	111660331	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_111661948_111674498_111674631_111694374_111694529_111694627_111694705_111696276_111696457_111700103_111700269_111702884_111703035_111703998_111704103_111707921_111708021_111714346_111714444_111719804_111720063_111780565_111780636_111846588_111846630_111872967
H1_mix_00075635	chr6	-	3568	13	NIC	ENSG00000010810.17	novel	3628	14	NA	NA	0	-7	intron_retention	FALSE	canonical	3	78	junction_12	108.79402046477	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGAATTTTTTTTTTGTT	-1	True	NA	-5	True	ATTAAA	-16	NA	111873440	111660338	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_111661948_111674498_111674631_111694374_111694529_111694627_111694705_111696276_111696457_111700103_111700269_111702884_111703035_111703998_111704103_111707921_111708021_111714346_111714444_111719804_111720063_111780565_111780636_111872967
H1_mix_00075637	chr6	-	442	2	FSM	ENSG00000010810.17	ENST00000495935.1	436	2	0	-6	0	6	multi-exon	FALSE	canonical	3	206	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGATAG	NA	False	NA	NA	False	NA	NA	NA	111702986	111699928	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_111700269_111702884
H1_mix_00075639	chr6	-	768	3	FSM	ENSG00000010810.17	ENST00000495927.5	755	3	0	-13	0	13	multi-exon	FALSE	canonical	3	355	junction_1	2	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTAGGCTTAGACTTACA	NA	False	NA	NA	False	NA	NA	NA	111707953	111702402	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_111703035_111703998_111704103_111707921
H1_mix_00075642	chr6	-	959	8	FSM	ENSG00000074935.14	ENST00000604743.5	959	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	43.4764773369767	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGTGTAACTTTGTTTC	1	True	NA	NA	False	NA	NA	NA	112087498	112074709	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_112074851_112075936_112076113_112076321_112076510_112079632_112079755_112081091_112081208_112086555_112086609_112087232_112087307_112087409
H1_mix_00075644	chr6	-	9737	14	FSM	ENSG00000196591.12	ENST00000519065.6	9737	14	0	0	0	0	multi-exon	FALSE	canonical	3	2717	junction_10	195.507835161324	1223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTTCTTGCTGATCAC	9	True	NA	NA	False	AATAAA	-14	NA	113971148	113933027	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_113941089_113941707_113941766_113943350_113943507_113944279_113944411_113945361_113945471_113946007_113946149_113948978_113949088_113949167_113949261_113953276_113953419_113956012_113956152_113956618_113956694_113958648_113958767_113959905_113960019_113970856
H1_mix_00075645	chr6	-	4810	8	FSM	ENSG00000196591.12	ENST00000523334.1	4810	8	0	0	0	0	multi-exon	FALSE	canonical	3	2873	junction_1	109.627942214956	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCTTTTGTCTGTTTAT	2993	False	NA	24	True	ATTAAA	-14	NA	113956602	113940717	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_113941089_113941707_113941766_113943350_113943507_113944279_113944411_113945361_113945471_113946007_113949261_113953276_113953419_113956012
H1_mix_00075647	chr6	-	1765	5	FSM	ENSG00000196591.12	ENST00000425835.6	553	5	-525	-687	-246	687	multi-exon	FALSE	canonical	3	2717	junction_1	232.628862138815	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCCATCTCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	113971403	113955239	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_113956152_113956618_113956694_113958648_113958767_113959905_113960019_113970856
H1_mix_00075649	chr6	-	589	5	FSM	ENSG00000196591.12	ENST00000521610.5	580	5	0	-9	0	0	multi-exon	FALSE	canonical	3	26	junction_4	1305.79695492829	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTGGGCTGGAGGATTA	865	False	NA	NA	False	NA	NA	NA	113970495	113956109	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_113956152_113956618_113956694_113958648_113958767_113959905_113960019_113970254
H1_mix_00075650	chr6	-	551	4	FSM	ENSG00000196591.12	ENST00000520895.5	551	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	1573.55167976425	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATGCAGAGATGTACGTT	31	True	NA	NA	False	NA	NA	NA	113971126	113958661	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_113958767_113959905_113960019_113968633_113968697_113970856
H1_mix_00075652	chr6	-	4609	5	NIC	ENSG00000249853.9	novel	3869	5	NA	NA	-240	504	combination_of_known_splicesites	FALSE	canonical	1	10	junction_2	19.422924599555	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCCGTAATCATCTTTTA	NA	False	NA	-8	True	AATAAA	-22	NA	114343263	114055091	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_114058191_114062738_114062878_114168354_114168463_114228584_114228779_114342194
H1_mix_00075654	chr6	-	682	1	FSM	ENSG00000216471.3	ENST00000402237.1	625	1	7	-64	7	64	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CTAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	AATAAA	-10	NA	114084785	114084103	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_114084100_114084800
H1_mix_00075655	chr6	-	1377	3	ISM	ENSG00000249853.9	ENST00000312719.10	3869	5	14	112499	14	-618	5prime_fragment	FALSE	canonical	3	52	junction_1	4.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGATTTTCTTTTGCG	13	False	NA	-13	True	AATGAA	-25	NA	114343009	114168094	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_114168463_114228584_114228779_114342194
H1_mix_00075656	chr6	-	5142	3	Antisense	novelGene_ENSG00000228624.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	1	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCTTGTATAACAAAGGG	NA	False	NA	NA	False	NA	NA	NA	114412496	114400110	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr6_-_114402273_114406897_114406988_114409606
H1_mix_00075658	chr6	-	4155	1	FSM	ENSG00000187189.11	ENST00000420283.3	4112	1	-50	7	-50	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	754	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAATTCTGTGTTGTCT	2	True	NA	-11	True	AATAAA	-8	NA	116254125	116249970	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_116250000_116254100
H1_mix_00075659	chr6	-	2467	2	Genic_Genomic	ENSG00000187189.11	novel	4112	1	NA	NA	11	-1	multi-exon	FALSE	canonical	3	42	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGTGTTGTCTAGGTTA	25	True	NA	-5	True	AATAAA	-14	NA	116254064	116249964	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr6_-_116250419_116252051
H1_mix_00075660	chr6	-	5098	1	FSM	ENSG00000189241.8	ENST00000368608.4	5073	1	-26	1	-26	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTCCTGAAGCTTCTTGT	2	False	NA	NA	False	ATTAAA	-15	NA	116279956	116274858	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_116274900_116280000
H1_mix_00075661	chr6	-	521	1	FSM	ENSG00000217241.1	ENST00000402326.1	552	1	59	-28	59	28	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAATATATATAAAATTTG	7803	False	NA	NA	False	NA	NA	NA	116453506	116452985	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_116453000_116453500
H1_mix_00075663	chr6	-	2167	10	FSM	ENSG00000153975.10	ENST00000368576.8	2167	10	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_9	14.1220430096156	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTGTTTTTCTTATCTA	18	True	NA	-1	True	AATAAA	-22	NA	116668766	116635617	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_116635880_116645713_116645935_116647458_116647611_116651571_116651738_116652003_116652193_116656683_116656853_116658802_116658925_116660735_116660847_116666633_116667208_116668565
H1_mix_00075667	chr6	-	976	4	NNC	ENSG00000289372.1	novel	572	2	NA	NA	52	14908	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	14.4452991200136	435	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCCTGTTTGGTGATCT	-7	True	NA	-1	True	AATAAA	-18	NA	117675280	117658838	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_117659237_117662905_117663067_117664629_117664863_117675096
H1_mix_00075672	chr6	-	5422	14	FSM	ENSG00000111877.18	ENST00000619706.5	5219	14	135	-338	0	325	multi-exon	FALSE	canonical	3	14	junction_1	14.8323969741913	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTTTTTTAATGGTAAA	134	False	NA	NA	False	NA	NA	NA	118935024	118813116	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_118816295_118826146_118826293_118826781_118826865_118827926_118828131_118829047_118829251_118856370_118856546_118911649_118911770_118913294_118913421_118917560_118917762_118922004_118922087_118923810_118924128_118931419_118931739_118932606_118932741_118934890
H1_mix_00075673	chr6	-	2442	7	FSM	ENSG00000111877.18	ENST00000316068.7	2442	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	13.9453297638393	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGGAATGTTTCCTAA	44	False	NA	-2	True	AATAAA	-17	NA	118935114	118910596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_118911770_118913294_118913421_118917560_118917762_118922004_118922087_118923810_118924128_118931419_118931739_118934890
H1_mix_00075675	chr6	-	3675	18	NNC	ENSG00000111879.20	novel	4128	18	NA	NA	12020	6	at_least_one_novel_splicesite	FALSE	canonical	1	34	junction_17	74.6080879128189	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTTTTTTCTACGTTT	NA	False	NA	6	True	AATAAA	-24	NA	119066352	118959822	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_118960185_118961760_118961964_118964666_118964772_118966834_118966953_118974427_118974575_118975023_118975209_118975916_118976045_118979364_118979519_118980137_118980351_119002898_119003050_119003500_119003623_119006446_119006609_119011308_119011432_119016746_119016945_119019977_119020160_119022944_119023081_119023958_119024814_119066221
H1_mix_00075676	chr6	-	4068	18	FSM	ENSG00000111879.20	ENST00000338891.12	4128	18	0	60	0	6	multi-exon	FALSE	canonical	1	61	junction_12	63.9733941237241	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTTTTTTCTACGTTT	3	True	NA	6	True	AATAAA	-24	NA	119078664	118959822	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_118960185_118961760_118961964_118964666_118964772_118966834_118966953_118974427_118974575_118975023_118975209_118975916_118976045_118979364_118979519_118980137_118980351_119002898_119003050_119003500_119003623_119006446_119006609_119011308_119011432_119016746_119016945_119019977_119020160_119022944_119023081_119023958_119024814_119078140
H1_mix_00075677	chr6	-	3544	8	NIC	ENSG00000111879.20	novel	2721	8	NA	NA	16	507	combination_of_known_junctions	FALSE	canonical	1	10	junction_1	118.7415303102	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACTTTAAGCAAAACTCTA	135	False	NA	-19	True	NA	NA	NA	119078631	119004779	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_119006177_119006446_119006609_119011308_119011432_119016746_119016945_119019977_119020160_119022944_119023081_119023958_119024814_119078140
H1_mix_00075679	chr6	-	2426	6	ISM	ENSG00000111879.20	ENST00000621231.4	4048	19	-293	51348	239	0	5prime_fragment	FALSE	canonical	3	155	junction_5	60.0546417856272	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTTGAATTTTTCATG	NA	False	NA	0	True	AATAAA	-20	NA	119078940	119011176	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_119011432_119016746_119016945_119019977_119020160_119022944_119023081_119023958_119024814_119078140
H1_mix_00075680	chr6	-	5022	13	FSM	ENSG00000111885.7	ENST00000368468.4	5018	13	0	-4	0	4	multi-exon	FALSE	canonical	3	64	junction_11	10.3235841106124	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTATATTTTTCTCCTT	5	True	NA	NA	False	AATAAA	-22	NA	119349761	119177200	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_119179946_119180311_119180428_119188404_119188578_119189663_119189884_119193776_119193893_119201253_119201348_119204758_119204883_119248259_119248355_119290682_119290764_119301987_119302104_119306895_119306993_119348462_119349288_119349541
H1_mix_00075681	chr6	-	1861	4	ISM	ENSG00000146350.14	ENST00000398197.6	2690	12	124416	8	2670	-8	3prime_fragment	FALSE	canonical	2	8	junction_3	4.89897948556636	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTAACCCTGCTTTTTT	NA	False	NA	-8	True	ATTAAA	-9	NA	121112646	121079501	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_121080891_121090852_121091042_121106022_121106164_121112504
H1_mix_00075683	chr6	-	393	1	FSM	ENSG00000220326.2	ENST00000401679.2	213	1	-192	12	-192	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTACAAAGTGATATTGGAA	NA	False	NA	NA	False	NA	NA	NA	121641413	121641020	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_121641000_121641400
H1_mix_00075684	chr6	-	4585	2	Genic_Genomic	ENSG00000279453.1	novel	2435	1	NA	NA	-2125	16090	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAATAAACTAAATCGCT	3782	False	NA	NA	False	AAAAAG	-2	NA	122441348	122420698	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr6_-_122420731_122436795
H1_mix_00075687	chr6	-	3145	10	FSM	ENSG00000111897.7	ENST00000339697.5	3125	10	0	-20	0	20	multi-exon	FALSE	canonical	3	467	junction_6	49.9461438346407	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCAGCTTAACTTTAGGT	-8	True	NA	16	True	AATAAA	-35	NA	122471807	122443330	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_122445180_122446773_122447005_122447120_122447266_122451663_122451755_122451887_122452058_122453769_122453908_122454150_122454231_122456480_122456651_122458519_122458682_122471698
H1_mix_00075688	chr6	-	7693	8	NNC	ENSG00000186439.14	novel	1179	8	NA	NA	49211	1152	intron_retention	FALSE	canonical	3	178	junction_2	55.2190443338424	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGTCTTAATTTTACTT	NA	False	NA	-10	True	AATAAA	-28	NA	123587698	123497036	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_123503902_123512302_123512363_123516140_123516207_123530505_123530566_123547339_123547373_123548453_123548613_123570922_123571133_123587458
H1_mix_00075689	chr6	-	2620	9	NNC	ENSG00000186439.14	novel	4649	21	NA	NA	49211	1152	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	87.8854901277793	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGTCTTAATTTTACTT	NA	False	NA	-10	True	AATAAA	-28	NA	123587698	123497036	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_123498646_123503718_123503902_123512302_123512363_123516140_123516207_123530505_123530566_123547339_123547373_123548453_123548613_123570922_123571133_123587458
H1_mix_00075690	chr6	-	1179	8	FSM	ENSG00000186439.14	ENST00000546248.5	1179	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_7	90.3641160493907	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTAAAAGTTGAAAAAGAC	214	False	NA	74	True	NA	NA	NA	123637093	123503650	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_123503902_123512302_123512363_123516140_123516207_123530505_123530566_123547339_123547373_123548453_123548613_123570922_123571133_123636753
H1_mix_00075691	chr6	-	1513	6	NNC	ENSG00000186439.14	novel	1294	6	NA	NA	49211	198	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	111.956062810372	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTATGCTCAAGCTGGT	NA	False	NA	-8	True	AATAAA	-19	NA	123587698	123528482	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_123529294_123530505_123530566_123547339_123547373_123548453_123548613_123570922_123571133_123587458
H1_mix_00075693	chr6	-	1470	6	FSM	ENSG00000111906.18	ENST00000398153.7	1446	6	0	-24	0	24	multi-exon	FALSE	canonical	3	592	junction_3	196.186645824837	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTGCAAAAAAGAATACGAT	-24	True	NA	NA	False	GATAAA	-31	NA	125301967	125275325	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_125276244_125277101_125277241_125292840_125292910_125298713_125298817_125300537_125300660_125301848
H1_mix_00075694	chr6	-	1374	5	FSM	ENSG00000111906.18	ENST00000318787.13	1350	5	0	-24	0	24	multi-exon	FALSE	canonical	3	455	junction_3	237.518815044198	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTGCAAAAAAGAATACGAT	-31	True	NA	NA	False	GATAAA	-31	NA	125301974	125275325	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_125276244_125277101_125277241_125292840_125292910_125300537_125300660_125301848
H1_mix_00075695	chr6	-	509	5	FSM	ENSG00000237742.8	ENST00000606334.6	528	5	15	4	15	-4	multi-exon	FALSE	canonical	3	19	junction_4	6.80073525436772	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTTATCACATATCTTC	-1	True	NA	-1	True	AATAAA	-21	NA	125745610	125578557	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_125578726_125645633_125645701_125720423_125720508_125744901_125745066_125745584
H1_mix_00075697	chr6	-	5776	3	Antisense	novelGene_ENSG00000224506.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	38	junction_2	13.5	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTTACTCCTGTTTATT	NA	False	NA	NA	False	ATTAAA	-34	NA	125707407	125684344	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr6_-_125689647_125694166_125694399_125707165
H1_mix_00075698	chr6	-	6488	2	Antisense	novelGene_ENSG00000224506.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	61	junction_1	0	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTGTGTCCTATTTTA	NA	False	NA	NA	False	AATAAA	-15	NA	125707409	125683402	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr6_-_125689647_125707165
H1_mix_00075699	chr6	-	5526	1	Intergenic	novelGene_1313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGTGGTCTCTTCACA	NA	False	NA	NA	False	AATAAA	-25	NA	125707406	125701880	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_125701900_125707400
H1_mix_00075700	chr6	-	660	2	Antisense	novelGene_ENSG00000224506.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	39	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTGTTTGGTGGTCTCT	NA	False	NA	NA	False	AATAAA	-20	NA	125707402	125701885	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr6_-_125702309_125707165
H1_mix_00075701	chr6	-	2762	6	FSM	ENSG00000093144.19	ENST00000531967.5	2585	6	-60	-117	-60	117	multi-exon	FALSE	canonical	0	0	junction_3	300.799202126601	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGAGGAATTTTAAGTCT	674	False	NA	NA	False	TATAAA	-19	NA	127342935	127288594	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_127290278_127314815_127314897_127316449_127316503_127327001_127327145_127330808_127331031_127342355
H1_mix_00075702	chr6	-	2451	6	FSM	ENSG00000093144.19	ENST00000474289.6	2443	6	0	-8	0	0	multi-exon	FALSE	canonical	0	0	junction_3	297.784754478801	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTGTGTAAAGTGAATT	5	True	NA	-1	True	AATAAA	-22	NA	127343346	127288711	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_127290278_127314815_127314897_127316449_127316503_127327001_127327145_127330808_127331031_127342960
H1_mix_00075703	chr6	-	2339	6	FSM	ENSG00000093144.19	ENST00000454859.8	2339	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	244.017704275735	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTGTGTAAAGTGAATT	0	True	NA	-1	True	AATAAA	-22	NA	127343609	127288711	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_127290278_127314815_127314897_127316449_127316503_127327001_127327145_127330808_127331031_127343335
H1_mix_00075704	chr6	-	1449	4	FSM	ENSG00000093144.19	ENST00000528402.5	1449	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	306.657608561876	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTAGCCATGACATGGAA	6	True	NA	NA	False	ACTAAA	-3	NA	127343549	127289266	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_127290278_127314815_127314897_127327001_127327145_127343335
H1_mix_00075705	chr6	-	1354	5	FSM	ENSG00000093144.19	ENST00000368291.6	1354	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	271.418841460942	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTGCTGTCAATTCCA	10	True	NA	NA	False	AATATA	-16	NA	127343599	127289633	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_127290278_127314815_127314897_127327001_127327145_127330808_127331031_127343335
H1_mix_00075711	chr6	-	11034	11	NIC	ENSG00000255330.9	novel	11464	12	NA	NA	-311	-2642	intron_retention	FALSE	canonical	3	13	junction_10	10.4594454919943	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTCTGTGGCATTTGTA	23	True	NA	-3	True	AATAAA	-15	NA	127519312	127441047	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_127444283_127446407_127447741_127449821_127449902_127449989_127450353_127453846_127454102_127473079_127476469_127482912_127482985_127512890_127513050_127514822_127515048_127515513_127516703_127518578
H1_mix_00075713	chr6	-	6036	31	NIC	ENSG00000152894.15	novel	5816	31	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_30	49.4026652452409	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGTTTGCACATCATTT	5	True	NA	NA	False	AATAAA	-20	NA	128520587	127968781	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_127970281_127973021_127973158_127973663_127973828_127976656_127976783_127976922_127977055_127981115_127981290_127982830_127982981_127983241_127983378_127985720_127985876_127990768_127990886_127991293_127991392_127992672_127992710_127995461_127995539_127996900_127996989_127998719_127998905_128005083_128005245_128009129_128009269_128064757_128064795_128067518_128067793_128078812_128078919_128082436_128082639_128083714_128083825_128089689_128089993_128184431_128184726_128218921_128219097_128240034_128240151_128242520_128242603_128322038_128322311_128397565_128397689_128409293_128409333_128520258
H1_mix_00075715	chr6	-	1722	3	FSM	ENSG00000152894.15	ENST00000525459.1	1722	3	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_2	11	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTGAGTTGAGTTTTC	5	True	NA	NA	False	AAAAAG	-22	NA	128520587	128321040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_128322311_128397565_128397689_128520258
H1_mix_00075719	chr6	-	4414	15	FSM	ENSG00000146376.11	ENST00000368149.3	4414	15	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_12	4.96312936172577	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGAATTCTTAAAGGAG	-1	True	NA	-1	True	AATAAA	-29	NA	129710177	129576131	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_129578605_129580069_129580132_129583987_129584113_129599215_129599357_129600641_129600849_129605876_129605960_129607892_129608053_129611532_129611611_129616211_129616304_129618686_129618853_129629352_129629523_129634041_129634106_129638393_129638630_129641815_129642019_129710023
H1_mix_00075720	chr6	-	4445	15	NNC	ENSG00000146376.11	novel	4414	15	NA	NA	-21340	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	14.6182720439531	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTGAATTCTTAAAGGA	10	False	NA	-2	True	AATAAA	-28	NA	129731517	129576132	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_129578605_129580069_129580132_129583987_129584113_129599215_129599357_129600641_129600849_129605876_129605960_129607892_129608053_129611532_129611611_129616211_129616304_129618686_129618853_129629352_129629523_129634041_129634106_129638393_129638630_129641815_129642019_129731331
H1_mix_00075721	chr6	-	1134	7	NNC	ENSG00000164483.17	novel	1877	11	NA	NA	-41	120	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	30.7431112428279	1031	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAACATCTCGTGTCCAGT	7305	False	NA	-3	True	AAGAAA	-20	NA	130215683	130175637	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_130176009_130184102_130184188_130184437_130184624_130209494_130209609_130214336_130214527_130215194_130215295_130215595
H1_mix_00075724	chr6	-	1667	2	FSM	ENSG00000079819.19	ENST00000526782.1	424	2	-220	-1023	-220	0	multi-exon	FALSE	canonical	3	444	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTCACTTCTCTTTT	NA	False	NA	-9	True	AATAAA	-16	NA	130858548	130839349	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_130840599_130858130
H1_mix_00075726	chr6	-	4226	18	FSM	ENSG00000079819.19	ENST00000628542.2	4247	18	21	0	2	0	multi-exon	FALSE	canonical	3	304	junction_17	45.679112457215	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCACTTCTCTTTTTCT	NA	False	NA	-6	True	AATAAA	-19	NA	131063301	130839346	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_130840599_130858130_130858244_130863637_130863719_130865535_130865635_130867458_130867582_130869562_130870127_130885095_130885269_130890293_130890467_130894343_130894442_130894966_130895120_130899490_130899579_130900961_130901181_130904464_130904541_130908820_130908864_130926604_130926710_130955104_130955318_130955993_130956500_131063154
H1_mix_00075727	chr6	-	4225	18	NIC	ENSG00000079819.19	novel	4186	18	NA	NA	13	0	intron_retention	FALSE	canonical	3	121	junction_17	75.6305901019525	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTCACTTCTCTTTT	-8	True	NA	-9	True	AATAAA	-16	NA	131063290	130839349	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_130840599_130858130_130858244_130863637_130863719_130865535_130865635_130867458_130867582_130869562_130870127_130885095_130885269_130890293_130890467_130894343_130894442_130894966_130895120_130899490_130899579_130900961_130901181_130904464_130904541_130908820_130908864_130926604_130926710_130955104_130955318_130955993_130956500_131063141
H1_mix_00075728	chr6	-	572	2	FSM	ENSG00000079819.19	ENST00000534166.1	572	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGGAAAGACGAAAGAGTAA	4406	False	NA	NA	False	AATATA	-27	NA	130878625	130870076	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_130870127_130878103
H1_mix_00075730	chr6	-	4132	7	FSM	ENSG00000112282.18	ENST00000479213.1	3173	7	-961	2	-961	-2	multi-exon	FALSE	canonical	3	121	junction_4	21.0449254902195	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCCGACTCCATTGGAAT	NA	False	NA	-17	True	AATAAA	-12	NA	131597482	131586739	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_131587847_131589464_131589597_131590321_131590443_131591312_131591528_131592387_131593172_131594098_131594336_131595946
H1_mix_00075732	chr6	-	1750	1	FSM	ENSG00000180658.4	ENST00000315453.4	1758	1	61	-53	61	53	mono-exon	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTGTTTGCCGCTGAA	9612	False	NA	NA	False	AAGAAA	-19	NA	131701340	131699590	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_131699600_131701300
H1_mix_00075734	chr6	-	2338	5	FSM	ENSG00000118523.6	ENST00000367976.4	2338	5	0	0	0	0	multi-exon	TRUE	canonical	3	341	junction_4	51.3225096814254	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTGGTTATTCATTTAT	-1	True	NA	NA	False	AATAAA	-21	NA	131951372	131948175	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_131949561_131949948_131950161_131950291_131950544_131950769_131950993_131951106
H1_mix_00075737	chr6	-	1463	10	FSM	ENSG00000079950.14	ENST00000367937.4	1090	10	133	-506	0	506	multi-exon	FALSE	canonical	3	13	junction_1	62.8737712493144	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCTGTTCTTTATTTTT	19	True	NA	-2	True	AATAAA	-22	NA	132513065	132461207	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_132461861_132463992_132464076_132468402_132468476_132469950_132470048_132470573_132470627_132471462_132471601_132472281_132472376_132475592_132475663_132503445_132503589_132513006
H1_mix_00075738	chr6	-	2452	14	FSM	ENSG00000146409.12	ENST00000275227.9	2452	14	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_3	28.3590670930927	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTTGGTCTATTTTCA	-6	True	NA	-2	True	AATAAA	-21	NA	132798637	132769369	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_132770337_132770889_132770940_132771035_132771130_132772131_132772207_132772992_132773089_132774221_132774314_132776327_132776430_132779267_132779405_132783932_132784090_132787433_132787582_132789763_132789838_132790176_132790273_132796981_132797122_132798413
H1_mix_00075742	chr6	-	3029	14	FSM	ENSG00000118515.12	ENST00000367858.10	3245	14	224	-8	23	0	multi-exon	FALSE	canonical	0	0	junction_12	18.0403886128258	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGTCATGTGTTATTT	219	False	NA	-1	True	AATAAA	-22	NA	134317888	134169247	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_134170436_134170825_134170916_134171022_134171179_134171636_134171733_134172192_134172317_134172661_134172775_134173022_134173155_134173273_134173358_134173461_134173567_134174004_134174081_134174510_134174587_134207355_134207432_134261932_134262149_134317391
H1_mix_00075743	chr6	-	7010	18	FSM	ENSG00000112339.15	ENST00000367837.10	7087	18	0	77	0	-77	multi-exon	FALSE	canonical	3	704	junction_7	74.9939328572514	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTCATAGCTCTGCCTT	-15	True	NA	NA	False	ATTAAA	-31	NA	135054822	134960454	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_134965291_134966328_134966474_134969237_134969339_134978678_134978788_134979177_134979269_134982457_134982563_134985340_134985410_134986065_134986184_134986735_134986811_134987644_134987792_134993757_134993876_134996776_134996943_134997396_134997657_135002733_135002843_135039572_135039768_135042000_135042127_135050581_135050648_135054648
H1_mix_00075745	chr6	-	8916	5	FSM	ENSG00000112339.15	ENST00000367822.9	2793	5	81	-6204	0	6204	multi-exon	FALSE	canonical	3	56	junction_1	388.637684739913	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGGATAGATATTGCCTA	4	True	NA	NA	False	AATAAA	-45	NA	135054803	135029652	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_135038027_135039572_135039768_135042000_135042127_135050581_135050648_135054648
H1_mix_00075747	chr6	-	4979	2	FSM	ENSG00000135541.22	ENST00000679490.1	4619	2	0	-360	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGCCCTCCAAGCAATAGA	5	False	NA	NA	False	NA	NA	NA	135293385	135283631	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_135285648_135290422
H1_mix_00075748	chr6	-	3586	23	ISM	ENSG00000135541.22	ENST00000265602.11	6063	29	4	111122	1	-332	5prime_fragment	FALSE	canonical	3	13	junction_20	16.8020192607814	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTAGCATCTCTTTTGT	8	True	NA	NA	False	AATAAA	-36	NA	135497736	135394653	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_135394897_135404950_135404978_135411347_135411545_135427166_135427308_135428628_135428760_135429881_135430001_135431207_135431315_135433026_135433257_135438374_135438499_135442581_135442715_135447007_135447161_135448289_135448476_135453340_135453437_135455733_135455927_135457493_135457714_135463124_135463307_135465813_135466374_135467580_135467635_135490622_135490748_135492227_135492292_135495813_135495899_135497187_135497250_135497582
H1_mix_00075749	chr6	-	1074	5	FSM	ENSG00000135541.22	ENST00000524469.5	1074	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	29.0376910239089	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTAAAGCAGGTTTGCTA	7	True	NA	NA	False	AAAAAG	-2	NA	135497737	135463136	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_135463307_135465813_135466374_135490622_135490748_135492227_135492292_135497582
H1_mix_00075750	chr6	-	1868	8	FSM	ENSG00000146410.12	ENST00000420702.6	1789	8	19	-98	0	88	multi-exon	FALSE	canonical	3	65	junction_7	7.68513008932158	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTTGGATAATAGAAATG	-2	True	NA	88	True	NA	NA	NA	136250292	136230935	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_136231389_136233324_136233500_136239465_136239821_136241443_136241677_136242860_136242974_136244764_136244870_136249036_136249154_136249975
H1_mix_00075751	chr6	-	1572	8	FSM	ENSG00000146410.12	ENST00000451457.6	1524	8	-38	-10	-27	10	multi-exon	FALSE	canonical	3	23	junction_7	20.6792807675031	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAAATTCATGTTTTCTC	9878	False	NA	10	True	AATAAA	-34	NA	136250362	136231013	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_136231389_136233324_136233500_136239465_136239821_136241443_136241677_136242860_136242974_136244764_136244870_136249036_136249154_136250263
H1_mix_00075754	chr6	-	7119	12	FSM	ENSG00000029363.17	ENST00000353331.8	7110	12	0	-9	0	9	multi-exon	FALSE	canonical	3	78	junction_9	271.867736437597	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTATTTGCTACCTTGAG	-39	True	NA	-1	True	AATAAA	-31	NA	136289851	136256853	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_136261116_136261264_136261478_136268161_136268340_136269436_136269613_136271994_136272080_136273081_136273188_136275531_136275702_136275842_136276509_136277864_136278771_136279762_136279877_136282583_136282688_136289712
H1_mix_00075755	chr6	-	7492	15	FSM	ENSG00000029363.17	ENST00000640069.1	7719	15	0	227	0	9	multi-exon	FALSE	canonical	3	4	junction_7	357.797172049376	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTATTTGCTACCTTGAG	-35	True	NA	-1	True	AATAAA	-31	NA	136289847	136256853	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_136261116_136261264_136261478_136267028_136267176_136268161_136268340_136269140_136269304_136269436_136269613_136270322_136270384_136271994_136272080_136273081_136273188_136275531_136275702_136275842_136276509_136277864_136278777_136279762_136279877_136282583_136282688_136289712
H1_mix_00075756	chr6	-	5371	12	FSM	ENSG00000029363.17	ENST00000527536.5	5371	12	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_2	203.388485497724	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTGTTTGTTTACCT	-17	True	NA	-16	True	AATAAA	-17	NA	136289829	136258585	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_136261116_136261264_136261478_136268161_136268340_136269436_136269613_136271994_136272080_136273081_136273188_136275531_136275702_136275842_136276509_136277864_136278777_136279762_136279877_136282583_136282688_136289712
H1_mix_00075762	chr6	-	3758	18	FSM	ENSG00000135525.19	ENST00000354570.8	3758	18	0	0	0	0	multi-exon	FALSE	canonical	3	569	junction_12	64.9126642438804	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTAGCTTTCTCATATGT	4	True	NA	-31	True	AATAAA	-19	NA	136550422	136342733	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_136344239_136345855_136346080_136356691_136356795_136359819_136359878_136359980_136360032_136360696_136360799_136361004_136361180_136362449_136362703_136365734_136366019_136366326_136366440_136372500_136372626_136377754_136377869_136383670_136383782_136388392_136388511_136389353_136389518_136411619_136411698_136421700_136421800_136550341
H1_mix_00075763	chr6	-	5715	30	FSM	ENSG00000197442.10	ENST00000359015.5	5157	30	-561	3	-561	-3	multi-exon	FALSE	canonical	2	6	junction_5	3.91588125974576	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTTTTGATAAATTCTA	28	True	NA	NA	False	ATTAAA	-14	NA	136793038	136557048	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_136557819_136558799_136558877_136561532_136561646_136562502_136562616_136567630_136567875_136580300_136580407_136583554_136583741_136592172_136592342_136592436_136592615_136601021_136601043_136601801_136601980_136605208_136605367_136611281_136611388_136613119_136613257_136614158_136614287_136622847_136622982_136637324_136637407_136639542_136639639_136642519_136642570_136650983_136651092_136656306_136656461_136659218_136659379_136669282_136669396_136694139_136694311_136695950_136696058_136697218_136697388_136698488_136698683_136705109_136705134_136720449_136720590_136791709
H1_mix_00075764	chr6	-	3177	6	FSM	ENSG00000016402.14	ENST00000367748.4	3522	6	313	32	97	-32	multi-exon	FALSE	canonical	1	1	junction_4	4.17612260356422	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAGCAAAAGAAAAATAAAG	442	False	NA	NA	False	AATAAA	-10	NA	137044867	137000002	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_137002356_137004620_137004761_137008598_137008744_137009316_137009493_137016967_137017104_137044640
H1_mix_00075768	chr6	-	235	1	FSM	ENSG00000213108.3	ENST00000418879.1	476	1	142	99	142	-99	mono-exon	FALSE	NA	NA	NA	NA	NA	325	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTAAAGCACCAAAACCAGA	NA	False	NA	NA	False	NA	NA	NA	137544230	137543995	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_137544000_137544200
H1_mix_00075769	chr6	-	4201	3	FSM	ENSG00000112378.12	ENST00000421351.4	4198	3	0	-3	0	3	multi-exon	FALSE	canonical	3	1095	junction_1	38	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGAGCATGCGTGTGT	0	True	NA	2	True	AATAAA	-18	NA	138107419	138088501	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_138092269_138096353_138096495_138107126
H1_mix_00075770	chr6	-	7036	8	FSM	ENSG00000135540.12	ENST00000343505.10	7063	8	80	-53	-46	53	multi-exon	FALSE	canonical	3	12	junction_7	6.2792174216674	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGTTCTTATACAGAATT	142	False	NA	40	True	NA	NA	NA	138499414	138421989	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_138424817_138429710_138429844_138430392_138433681_138441982_138442115_138447000_138447194_138473305_138473434_138496218_138496372_138499232
H1_mix_00075772	chr6	-	609	2	FSM	ENSG00000135540.12	ENST00000534376.1	609	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGAGCTTGTATCTTGTA	-4	True	NA	-5	True	AATAAA	-15	NA	138572462	138571529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_138572062_138572385
H1_mix_00075773	chr6	-	4499	20	FSM	ENSG00000135597.19	ENST00000450536.7	4533	20	0	34	0	-34	multi-exon	TRUE	canonical	3	276	junction_8	46.8695957180141	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTCCAATAAATAACACTTA	12	True	NA	NA	False	NA	NA	NA	138988253	138903526	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_138905133_138907494_138907601_138908667_138908817_138911275_138911372_138912764_138912951_138914696_138914762_138915857_138915977_138917554_138917628_138920214_138920317_138921036_138921125_138926400_138926482_138929976_138930099_138941334_138941490_138943512_138943577_138943852_138944016_138944497_138944623_138945218_138945373_138945500_138945698_138947789_138947914_138987529
H1_mix_00075774	chr6	-	4119	20	FSM	ENSG00000135597.19	ENST00000258062.9	3161	20	380	-1338	0	-39	multi-exon	FALSE	canonical	3	92	junction_8	73.371479208333	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGCCTTCCAATAAATAAC	426	False	NA	NA	False	NA	NA	NA	138987881	138903531	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_138905133_138907494_138907601_138908667_138908817_138911275_138911372_138912764_138912951_138914696_138914762_138915857_138915977_138917554_138917625_138920214_138920317_138921036_138921125_138926400_138926482_138929976_138930099_138941334_138941490_138943512_138943577_138943852_138944016_138944497_138944623_138945218_138945373_138945500_138945698_138947789_138947914_138987529
H1_mix_00075775	chr6	-	3665	17	FSM	ENSG00000135597.19	ENST00000626459.2	3665	17	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_13	97.3331906391648	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTTGTTCATCTTTTTA	4	True	NA	NA	False	AATAAA	-16	NA	138988261	138904016	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_138905133_138907494_138907601_138908667_138908817_138911275_138911372_138912764_138912951_138914696_138914762_138915857_138915977_138917554_138917628_138920214_138920317_138921036_138921125_138926400_138926482_138929976_138930099_138941334_138941490_138945218_138945373_138945500_138945698_138947789_138947914_138987529
H1_mix_00075776	chr6	-	3051	19	NIC	ENSG00000135597.19	novel	4533	20	NA	NA	-50	313	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	86.7257811213662	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGGTACATTGAAGCCTC	21	True	NA	-65	True	NA	NA	NA	138987931	138904546	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_138905133_138908667_138908817_138911275_138911372_138912764_138912951_138914696_138914762_138915857_138915977_138917554_138917628_138920214_138920317_138921036_138921125_138926400_138926482_138929976_138930099_138941334_138941490_138943512_138943577_138943852_138944016_138944497_138944623_138945218_138945373_138945500_138945698_138947789_138947914_138987529
H1_mix_00075777	chr6	-	2469	19	FSM	ENSG00000135597.19	ENST00000529597.5	2468	19	0	-1	0	0	multi-exon	FALSE	canonical	3	92	junction_8	92.8207485319133	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAGATTGTGTTTGTTGGC	667	False	NA	-5	True	AATAAA	-26	NA	138987640	138904859	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_138905133_138907494_138907601_138908667_138908817_138911275_138911372_138912764_138912951_138914696_138914762_138915857_138915977_138917554_138917625_138920214_138920317_138921036_138921125_138929976_138930099_138941334_138941490_138943512_138943577_138943852_138944016_138944497_138944623_138945218_138945373_138945500_138945698_138947789_138947914_138987529
H1_mix_00075778	chr6	-	2521	17	FSM	ENSG00000135597.19	ENST00000409812.6	2511	17	0	-10	0	0	multi-exon	FALSE	canonical	1	7	junction_6	109.20477825512	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAGATTGTGTTTGTTGGC	426	False	NA	-5	True	AATAAA	-26	NA	138987881	138904859	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_138905133_138907494_138907601_138908667_138908817_138911275_138911372_138912764_138912951_138914696_138914762_138920214_138920317_138921036_138921125_138929976_138930099_138941334_138941490_138943512_138943577_138943852_138944016_138944497_138944623_138945218_138945373_138945500_138945698_138947789_138947914_138987529
H1_mix_00075780	chr6	-	2382	2	FSM	ENSG00000164442.10	ENST00000367651.4	2382	2	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCAGTGATGAGAGTTTT	0	True	NA	NA	False	ATTAAA	-17	NA	139374648	139371806	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_139373953_139374412
H1_mix_00075782	chr6	-	1860	2	Intergenic	novelGene_1319	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	87	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGAGTCAGCGAAGGGAG	NA	False	NA	NA	False	NA	NA	NA	142018010	142016024	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_142016744_142016869
H1_mix_00075784	chr6	-	1649	3	ISM	ENSG00000189007.16	ENST00000606514.5	6651	6	9412	4160	9412	-4160	3prime_fragment	FALSE	canonical	3	74	junction_1	0.5	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTTAGTGCTTCTACTA	NA	False	NA	-19	True	TTTAAA	-16	NA	143432565	143426991	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_143428507_143428611_143428685_143432504
H1_mix_00075785	chr6	-	302	3	ISM	ENSG00000189007.16	ENST00000237283.9	6244	6	35	11051	13	10674	5prime_fragment	FALSE	canonical	3	80	junction_1	5	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCACTGTGGAGCCGTG	37	False	NA	NA	False	NA	NA	NA	143450660	143433882	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_143433982_143438589_143438695_143450562
H1_mix_00075787	chr6	-	737	2	FSM	ENSG00000001036.14	ENST00000451668.1	737	2	0	0	0	0	multi-exon	FALSE	canonical	3	838	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGGTCAAAATCTTTG	9588	False	NA	NA	False	AATAAA	-40	NA	143502122	143496951	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_143497498_143501931
H1_mix_00075788	chr6	-	364	1	FSM	ENSG00000270890.1	ENST00000604280.1	628	1	139	125	139	-125	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACTGATACCCTTCTGCT	NA	False	NA	NA	False	NA	NA	NA	143858550	143858186	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_143858200_143858600
H1_mix_00075789	chr6	-	2780	3	FSM	ENSG00000118495.21	ENST00000367571.3	2800	3	20	0	20	0	multi-exon	FALSE	canonical	2	2	junction_2	1	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCTCGAACTGCATGTA	6604	False	NA	NA	False	NA	NA	NA	143961392	143941283	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_143942664_143947984_143948461_143960468
H1_mix_00075791	chr6	-	500	3	Antisense	novelGene_ENSG00000152818.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	27	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGTTTGACTCTTTTCGT	NA	False	NA	NA	False	AATAAA	-16	NA	144610873	144598095	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr6_-_144598364_144598657_144598766_144610749
H1_mix_00075793	chr6	-	3335	5	FSM	ENSG00000112425.16	ENST00000639049.1	3335	5	0	0	0	0	multi-exon	TRUE	canonical	3	6	junction_4	11.056672193748	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGTACAGGATTTTTA	11	True	NA	0	True	AATAAA	-16	NA	145735470	145625303	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_145627694_145635244_145635487_145686121_145686297_145720900_145721156_145735197
H1_mix_00075794	chr6	-	1684	1	FSM	ENSG00000280184.2	ENST00000625058.1	2073	1	190	199	190	-199	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCAGTCTCGGGTATGT	NA	False	NA	NA	False	ATTAAA	-10	NA	145791642	145789958	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_145790000_145791600
H1_mix_00075795	chr6	-	9052	3	FSM	ENSG00000118496.5	ENST00000237281.5	9051	3	0	-1	0	1	multi-exon	FALSE	canonical	3	250	junction_1	19	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTATGCTTTTGTATTG	-15	True	NA	NA	False	AATAAA	-17	NA	145814795	145793500	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_145800310_145804371_145806422_145814602
H1_mix_00075796	chr6	-	7598	30	FSM	ENSG00000146414.17	ENST00000275233.12	7596	30	0	-2	0	2	multi-exon	TRUE	canonical	3	18	junction_29	18.0697551814812	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAATTCTTTGATTTCTG	-3	True	NA	NA	False	AATAAA	-23	NA	145964358	145884804	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_145886788_145888019_145888101_145893214_145893394_145894149_145894237_145894884_145894978_145910447_145910637_145913477_145913550_145918130_145918233_145919347_145919492_145921166_145921393_145922285_145922349_145922662_145922837_145923642_145923786_145924738_145924847_145926203_145926297_145927188_145927278_145933056_145933179_145934906_145935164_145935277_145935442_145940722_145940802_145941622_145941875_145943142_145943803_145945380_145945638_145946232_145946342_145947492_145947644_145948271_145948351_145950263_145950483_145952348_145952479_145954689_145955355_145963730
H1_mix_00075799	chr6	-	253	1	FSM	ENSG00000219487.2	ENST00000407763.2	664	1	389	22	389	-22	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCACCTATGCCAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	149112283	149112030	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_149112000_149112300
H1_mix_00075800	chr6	-	2475	13	FSM	ENSG00000131013.4	ENST00000253329.3	2475	13	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_3	37.0828651655841	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTAGTTTTTTTTTC	-18	True	NA	NA	False	NA	NA	NA	149546043	149504494	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_149505705_149512154_149512303_149517353_149517451_149521059_149521172_149525142_149525210_149526651_149526777_149533457_149533575_149534677_149534775_149535595_149535739_149540941_149541060_149541366_149541432_149541518_149541587_149545935
H1_mix_00075804	chr6	-	3321	4	FSM	ENSG00000131023.13	ENST00000392273.7	2567	4	-748	-6	-748	6	multi-exon	FALSE	canonical	3	96	junction_1	11.0855260988773	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTATTTTAGTATTTCA	7542	False	NA	-6	True	AATAAA	-24	NA	149718853	149682912	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_149684593_149695073_149695222_149701778_149702267_149717848
H1_mix_00075805	chr6	-	3831	8	FSM	ENSG00000120253.14	ENST00000340413.7	3831	8	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	23.279140176281	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTCTATCTGTCTTAT	-3	True	NA	-1	True	AATAAA	-26	NA	149746529	149724314	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_149727199_149731612_149731736_149736470_149736623_149738642_149738779_149742389_149742571_149743637_149743716_149745939_149746063_149746375
H1_mix_00075806	chr6	-	3634	7	FSM	ENSG00000120256.11	ENST00000239367.7	3634	7	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	9.78803124001735	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACTGAGCTGTTACTGCA	23	False	149864372	37	True	AATATA	-18	NA	149864359	149818756	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_149820704_149826263_149826360_149836084_149836298_149837337_149837464_149842982_149843125_149853002_149853161_149863407
H1_mix_00075807	chr6	-	1903	4	FSM	ENSG00000218358.3	ENST00000533735.2	1905	4	22	-20	13	20	multi-exon	FALSE	canonical	2	4	junction_3	1.24721912892465	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTTATAACCCAGTAGAG	63	False	NA	NA	False	AATAAA	-40	NA	150005144	149997998	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_149998885_150000065_150000195_150000852_150001669_150005072
H1_mix_00075808	chr6	-	2390	2	ISM	ENSG00000131019.11	ENST00000367339.7	3111	5	4446	0	4391	0	3prime_fragment	FALSE	canonical	2	4	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAGATTTCCATTTCCAT	4480	False	NA	NA	False	ATTAAA	-19	NA	150064675	150061052	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_150063352_150064584
H1_mix_00075811	chr6	-	2876	2	NIC	ENSG00000181472.5	novel	3103	3	NA	NA	23	-19	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGTTTAATTAAATGAGTAT	309	False	NA	-33	True	NA	NA	NA	151391536	151364133	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_151366893_151391419
H1_mix_00075812	chr6	-	1975	13	NNC	ENSG00000155906.20	novel	1948	12	NA	NA	0	1969	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	57.2375653647925	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCCATTAGCCCATTCCG	4	True	NA	NA	False	NA	NA	NA	151452126	151396928	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_151396958_151404763_151405268_151405719_151405837_151417278_151417400_151421244_151421322_151422540_151422606_151423524_151423632_151427481_151427583_151430137_151430178_151433154_151433231_151436445_151436555_151445307_151445826_151452015
H1_mix_00075813	chr6	-	1949	12	FSM	ENSG00000155906.20	ENST00000444024.3	1948	12	0	-1	0	1	multi-exon	FALSE	canonical	3	171	junction_8	21.4734123514762	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGTATCTACATCACTG	4	True	NA	0	True	AATAAA	-17	NA	151452126	151404760	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_151405268_151405719_151405837_151417278_151417400_151421244_151421322_151422540_151422606_151423524_151423632_151427481_151427583_151430137_151430178_151433154_151433231_151436445_151436555_151445307_151445826_151452015
H1_mix_00075814	chr6	-	1340	11	FSM	ENSG00000155906.20	ENST00000622845.5	1340	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_10	56.8527923676577	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAACAATAAAATAAATAAA	-28	True	NA	-49	True	NA	NA	NA	151452158	151404883	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_151405268_151405719_151405837_151417278_151417400_151421244_151421322_151422540_151422606_151423524_151423632_151427481_151427583_151430137_151430178_151433154_151433231_151436445_151436555_151452015
H1_mix_00075816	chr6	-	846	3	FSM	ENSG00000155906.20	ENST00000491268.2	841	3	0	-5	0	5	multi-exon	FALSE	canonical	3	177	junction_1	12.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATAGGATCATTATTACT	112	False	NA	NA	False	ATTAAA	-24	NA	151452018	151436229	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_151436555_151445307_151445826_151452015
H1_mix_00075818	chr6	-	364	2	FSM	ENSG00000131018.25	ENST00000472563.2	525	2	0	161	0	-161	multi-exon	FALSE	canonical	3	7	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAAAGAGCCTCTCCAG	1838	False	NA	NA	False	NA	NA	NA	152149506	152148044	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_152148379_152149476
H1_mix_00075819	chr6	-	228	2	FSM	ENSG00000131018.25	ENST00000490866.2	581	2	353	0	-108	0	multi-exon	FALSE	canonical	3	6	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCGCACTGATTCAGCAT	NA	False	NA	NA	False	NA	NA	NA	152155042	152152064	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_152152142_152154891
H1_mix_00075821	chr6	-	2286	5	FSM	ENSG00000112029.10	ENST00000367241.3	2221	5	0	-65	0	55	multi-exon	FALSE	canonical	3	59	junction_4	145.53070981755	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCGTTTGTGTGAAGGCA	1	True	NA	NA	False	TATAAA	-43	NA	152983579	152970463	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_152971415_152972271_152972455_152973045_152973137_152974906_152975622_152983233
H1_mix_00075826	chr6	-	3514	6	FSM	ENSG00000112031.16	ENST00000485512.5	3514	6	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	81.6612515211468	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTGTATCCAGCATCAT	17	True	NA	-108	True	AATAAA	-33	NA	153002685	152987361	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_152990096_152992856_152992975_152994512_152994677_152995135_152995295_152998549_152998630_153002426
H1_mix_00075827	chr6	-	3700	7	FSM	ENSG00000112031.16	ENST00000367233.10	3700	7	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_5	48.9341961776788	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTGTATCCAGCATCAT	-7	True	NA	-108	True	AATAAA	-33	NA	153002709	152987361	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_152990096_152991184_152991322_152992856_152992975_152994512_152994677_152995135_152995320_152998549_152998630_153002426
H1_mix_00075828	chr6	-	3539	6	FSM	ENSG00000112031.16	ENST00000367231.9	3539	6	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	73.4177090353547	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTGTATCCAGCATCAT	17	True	NA	-108	True	AATAAA	-33	NA	153002685	152987361	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_152990096_152992856_152992975_152994512_152994677_152995135_152995320_152998549_152998630_153002426
H1_mix_00075829	chr6	-	7936	5	FSM	ENSG00000091844.8	ENST00000206262.2	7932	5	6	-10	6	10	multi-exon	FALSE	canonical	3	38	junction_1	4.81534007106456	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACTGTTTCCTCATTGGT	-17	True	NA	2	True	AATAAA	-26	NA	153131276	153004448	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_153011763_153024261_153024497_153026453_153026544_153043899_153044044_153131123
H1_mix_00075830	chr6	-	505	1	FSM	ENSG00000218426.5	ENST00000492974.2	447	1	0	-58	0	58	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAGAAGAAAAATGGAAT	19	False	NA	7	True	ATTAAA	-33	NA	153282733	153282228	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_153282200_153282700
H1_mix_00075831	chr6	-	21015	13	FSM	ENSG00000153721.19	ENST00000607772.6	21078	13	21	42	21	-42	multi-exon	FALSE	canonical	3	19	junction_2	5.14983818516013	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTCATTAACTAATGTAC	-8	True	NA	-55	True	GATAAA	-32	NA	154510664	154387556	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_154406653_154410342_154410433_154410933_154411143_154414298_154414424_154422505_154422653_154422914_154422984_154428127_154428188_154430471_154430592_154433465_154433508_154441291_154441380_154442087_154442291_154450094_154450259_154510062
H1_mix_00075834	chr6	-	433	3	FSM	ENSG00000029639.11	ENST00000470239.1	433	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	332	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAATAAGATACAGTACAA	-5	True	NA	NA	False	AATAAA	-6	NA	155314484	155257672	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_155257909_155311331_155311340_155314295
H1_mix_00075835	chr6	-	2799	7	FSM	ENSG00000029639.11	ENST00000367166.5	2799	7	0	0	0	0	multi-exon	FALSE	canonical	3	564	junction_4	40.0946796138008	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGGTGCTTTGTAATTTG	-5	True	NA	-2	True	AATAAA	-20	NA	155314484	155256133	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_155258083_155260272_155260401_155285157_155285278_155296952_155297105_155298476_155298586_155311187_155311340_155314295
H1_mix_00075838	chr6	-	1413	1	FSM	ENSG00000271265.1	ENST00000604082.1	446	1	-973	6	-973	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTTTCCTTTTAGATT	4817	False	NA	NA	False	AATAAA	-10	NA	156775635	156774222	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_156774200_156775600
H1_mix_00075839	chr6	-	4319	4	FSM	ENSG00000215712.11	ENST00000400788.9	4322	4	0	3	0	-3	multi-exon	FALSE	canonical	3	344	junction_1	8.64098759787715	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATAAGGATAAAGCTCATT	1	True	NA	NA	False	ATTAAA	-12	NA	157323519	157289027	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_157293000_157318781_157318920_157322704_157322806_157323411
H1_mix_00075840	chr6	-	1030	3	FSM	ENSG00000215712.11	ENST00000367144.4	1030	3	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_1	8	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTATTGCTGTTTGACAT	484	False	NA	NA	False	AATAAA	-20	NA	157323601	157318180	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_157318920_157322704_157322806_157323411
H1_mix_00075842	chr6	-	2028	15	FSM	ENSG00000122335.17	ENST00000642903.1	2022	15	116	-122	0	0	multi-exon	FALSE	canonical	3	69	junction_4	9.46017430913319	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGAGAATCATCAACTGTT	93	False	NA	NA	False	AATAAA	-20	NA	158168164	158114470	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_158114972_158116184_158116283_158117726_158117822_158119028_158119171_158120424_158120576_158128107_158128271_158130372_158130487_158143055_158143185_158144298_158144421_158146781_158146914_158148864_158148955_158150452_158150590_158155314_158155352_158158272_158158365_158168139
H1_mix_00075843	chr6	-	2020	14	ISM	ENSG00000122335.17	ENST00000642244.1	2729	16	0	3851	0	0	5prime_fragment	FALSE	canonical	0	0	junction_10	24.6088933748776	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGAGAATCATCAACTGTT	11	True	NA	NA	False	AATAAA	-20	NA	158168246	158114470	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_158114972_158116184_158116283_158117726_158117822_158119028_158119171_158120424_158120576_158128107_158128271_158130372_158130487_158143055_158143185_158144298_158144421_158146781_158146914_158150452_158150590_158155314_158155352_158158272_158158365_158168139
H1_mix_00075847	chr6	-	786	6	NNC	ENSG00000146425.11	novel	730	5	NA	NA	-24	406	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	763.023721780653	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATACAAC	8954	False	NA	NA	False	NA	NA	NA	158644767	158636067	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_158636100_158636473_158636898_158637127_158637206_158637770_158637895_158641318_158641361_158644681
H1_mix_00075850	chr6	-	3067	13	FSM	ENSG00000092820.19	ENST00000337147.11	3068	13	0	1	0	-1	multi-exon	FALSE	canonical	0	0	junction_10	1135.84684511406	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACGGGTGTGTGCTTGTG	6	True	NA	-4	True	AATAAA	-22	NA	158818227	158765741	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_158767079_158767260_158767513_158769325_158769419_158769783_158769945_158770763_158770895_158771243_158771408_158776407_158776505_158783519_158783667_158784643_158784728_158785308_158785584_158787107_158787204_158789287_158789372_158818081
H1_mix_00075851	chr6	-	3052	14	FSM	ENSG00000092820.19	ENST00000367075.4	3052	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	1096.46204034484	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGCAGCACGGGTGTGTG	0	True	NA	-10	True	AATAAA	-16	NA	158819368	158765747	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_158767079_158767260_158767513_158769325_158769419_158769783_158769945_158770763_158770895_158771243_158771408_158776407_158776505_158783519_158783667_158784643_158784728_158785308_158785584_158787107_158787204_158789287_158789372_158818081_158818167_158819316
H1_mix_00075854	chr6	-	314	1	FSM	ENSG00000216480.2	ENST00000404609.2	466	1	200	-48	200	48	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTGTAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-12	NA	159526327	159526013	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_159526000_159526300
H1_mix_00075856	chr6	-	990	6	FSM	ENSG00000112096.19	ENST00000367055.8	990	6	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	156.641501524979	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATTTTCACTGAGTTTC	8	True	NA	43	True	TTTAAA	-16	NA	159693234	159679063	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_159679299_159682473_159682639_159684853_159685034_159688125_159688243_159692660_159692864_159693144
H1_mix_00075857	chr6	-	815	5	FSM	ENSG00000112096.19	ENST00000367054.6	815	5	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_3	217.492959656169	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCTGCATTATGCTTGC	1207	False	NA	-9	True	AATAAA	-21	NA	159693228	159679115	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_159679299_159682473_159682639_159684853_159685034_159692660_159692864_159693144
H1_mix_00075858	chr6	-	991	4	FSM	ENSG00000112096.19	ENST00000337404.8	991	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	221.956452185258	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTATTGCAGTTATAGAAAA	1157	False	NA	NA	False	NA	NA	NA	159693278	159682164	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_159682639_159684853_159685034_159692660_159692864_159693144
H1_mix_00075861	chr6	-	1901	11	FSM	ENSG00000120438.12	ENST00000392168.6	1878	11	0	-23	0	0	multi-exon	FALSE	canonical	3	18	junction_10	696.894224398509	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGCTGTAAACTTGGGTT	NA	False	NA	-50	True	ATTAAA	-8	NA	159789703	159778963	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_159779262_159779626_159779791_159779894_159780088_159780442_159780567_159780934_159781111_159783940_159784068_159784665_159784848_159785385_159785497_159785899_159785998_159787742_159787872_159789404
H1_mix_00075867	chr6	-	2030	1	FSM	ENSG00000272841.1	ENST00000608721.1	2025	1	0	-5	0	5	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTACTACGTATTCTTTGG	111	False	NA	-4	True	AATAAA	-24	NA	160992342	160990312	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_160990300_160992300
H1_mix_00075868	chr6	-	8252	9	FSM	ENSG00000026652.15	ENST00000320285.9	7923	9	0	-329	0	329	multi-exon	FALSE	canonical	3	89	junction_5	18.9270804668866	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCTGTCTGTCTCCCTGA	0	True	NA	NA	False	NA	NA	NA	161274061	161129637	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_161136635_161139421_161139621_161146523_161146600_161149186_161149290_161153345_161153500_161154148_161154311_161166247_161166418_161232035_161232303_161273937
H1_mix_00075869	chr6	-	6072	4	FSM	ENSG00000026652.15	ENST00000624499.2	6072	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	61.0810026840497	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGGGTGTGGTGGCAG	197	False	NA	NA	False	AATACA	-29	NA	161273963	161160104	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_161165714_161166247_161166418_161232035_161232303_161273937
H1_mix_00075870	chr6	-	959	3	FSM	ENSG00000026652.15	ENST00000366905.3	942	3	0	-17	0	17	multi-exon	FALSE	canonical	3	134	junction_1	2.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTTGATCGTTGAAGG	128	False	NA	NA	False	NA	NA	NA	161274032	161165820	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_161166418_161232035_161232303_161273937
H1_mix_00075871	chr6	-	285	1	FSM	ENSG00000217557.1	ENST00000404178.1	291	1	3	3	3	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGCATAAGCACTTCAAAA	NA	False	NA	NA	False	NA	NA	NA	162957545	162957260	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_162957300_162957500
H1_mix_00075872	chr6	-	1044	1	FSM	ENSG00000270419.1	ENST00000604200.1	896	1	6	-154	6	154	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAGAATTTCAAATGAAC	2245	False	NA	NA	False	NA	NA	NA	163413954	163412910	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_163412900_163414000
H1_mix_00075875	chr6	-	2933	1	FSM	ENSG00000176381.6	ENST00000322583.5	3093	1	160	0	160	0	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGATTCTTTTTGAGGG	294	False	NA	NA	False	AATAAA	-16	NA	166308232	166305299	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_166305300_166308200
H1_mix_00075876	chr6	-	1049	8	FSM	ENSG00000198818.10	ENST00000361731.4	1033	8	0	-16	0	16	multi-exon	FALSE	canonical	3	1106	junction_4	69.4353318284175	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATAATATTTTAAGTGAC	10	True	NA	3	True	AATAAA	-36	NA	166342545	166319711	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_166320257_166322856_166322887_166324536_166324596_166326131_166326168_166328275_166328358_166329506_166329590_166330160_166330248_166342418
H1_mix_00075877	chr6	-	2576	8	FSM	ENSG00000198818.10	ENST00000487841.5	2576	8	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_7	518.075953772756	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGCATTTTTAAGATTT	8	True	NA	NA	False	ATTAAA	-20	NA	166342547	166319859	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_166320257_166322856_166324596_166326131_166326168_166328275_166328358_166329506_166329590_166330160_166330248_166331384_166331408_166342418
H1_mix_00075878	chr6	-	2061	2	FSM	ENSG00000198818.10	ENST00000479490.1	2061	2	0	0	0	0	multi-exon	FALSE	canonical	3	1342	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTATGTGTCATTAATA	NA	False	NA	-4	True	ATTAAA	-25	NA	166324688	166320027	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_166320257_166322856
H1_mix_00075880	chr6	-	5826	21	FSM	ENSG00000071242.12	ENST00000265678.9	5832	21	0	6	0	-6	multi-exon	FALSE	canonical	3	84	junction_8	20.2125579776534	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATAACCTTTGGACTTTCT	-1	True	NA	-4	True	AATAAA	-37	NA	166627251	166409369	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_166412888_166413793_166413932_166418224_166418343_166419881_166419959_166423255_166423418_166430452_166430612_166432400_166432491_166448723_166448850_166451102_166451234_166459448_166459552_166469840_166469906_166488832_166488922_166490670_166490742_166498507_166498651_166500886_166500925_166504505_166504613_166508202_166508283_166510276_166510358_166531231_166531314_166538667_166538785_166626920
H1_mix_00075884	chr6	-	585	2	ISM	ENSG00000071242.12	ENST00000506565.1	587	8	144	349871	-15	-347814	internal_fragment	FALSE	canonical	3	16	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTGACATATGTGTCT	-3	True	NA	-8	True	ATTAAA	-17	NA	166862526	166858093	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_166858260_166862107
H1_mix_00075885	chr6	-	8563	9	FSM	ENSG00000026297.17	ENST00000508775.6	8614	9	0	51	0	-51	multi-exon	FALSE	canonical	0	0	junction_6	95.592805037827	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGGATCCTATAGTTATCA	-3	True	NA	NA	False	CATAAA	-34	NA	166956550	166922163	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_166929792_166931043_166931119_166934090_166934137_166938894_166939009_166943018_166943090_166946681_166946740_166948569_166948626_166952487_166952549_166956096
H1_mix_00075886	chr6	-	2536	5	FSM	ENSG00000026297.17	ENST00000683770.1	2536	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	128.244639264181	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGACAAGATCTGATTTG	-3	True	NA	NA	False	NA	NA	NA	166956473	166927867	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_166929792_166931043_166931119_166934090_166934137_166938894_166939009_166956096
H1_mix_00075888	chr6	-	2234	8	FSM	ENSG00000026297.17	ENST00000611959.2	2234	8	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_6	73.1333699204294	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATAACCATATTGTCAGC	-18	True	NA	NA	False	NA	NA	NA	166956601	166928487	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_166929792_166931043_166931119_166934090_166934137_166938894_166939009_166943018_166943090_166946681_166946740_166952487_166952549_166956096
H1_mix_00075891	chr6	-	1317	9	NIC	ENSG00000026297.17	novel	1417	10	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	2	3	junction_7	125.59657638646	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAAGTGAAGTCTGTTTA	-3	True	NA	NA	False	AAAAAG	-40	NA	166956550	166929514	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_166929792_166931043_166931119_166934090_166934137_166938894_166939009_166943018_166943090_166946681_166946740_166952487_166952549_166955466_166955628_166956096
H1_mix_00075892	chr6	-	887	10	FSM	ENSG00000026297.17	ENST00000476238.6	887	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	116.595004445853	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTGCAGCTTTCTAAAAA	2192	False	NA	NA	False	AAAAAG	-15	NA	166957184	166929539	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_166929792_166931043_166931119_166934090_166934137_166938894_166939009_166943018_166943090_166946681_166946740_166948569_166948626_166952487_166952549_166956096_166956192_166957125
H1_mix_00075894	chr6	-	4150	2	FSM	ENSG00000198221.11	ENST00000669546.3	4090	2	-45	-15	0	15	multi-exon	FALSE	canonical	3	39	junction_1	0	299	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATAAATTACCTAGTCTC	NA	False	NA	NA	False	ATTAAA	-10	NA	167826833	167822087	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_167824807_167825402
H1_mix_00075896	chr6	-	950	1	FSM	ENSG00000235994.4	ENST00000538528.1	1016	1	67	-1	67	1	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACACCTCTTTCTACTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	167976872	167975922	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_167975900_167976900
H1_mix_00075903	chr6	-	2742	7	NIC	ENSG00000184465.16	novel	3511	20	NA	NA	10110	-6	combination_of_known_junctions	FALSE	canonical	1	3	junction_5	20.2134443708472	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTGAGCATGCCCTGTT	NA	False	NA	-21	True	ATTAAA	-13	NA	169639123	169558326	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_169559928_169582835_169582935_169602218_169602322_169632946_169633069_169634427_169634526_169636370_169636505_169638538
H1_mix_00075906	chr6	-	1878	11	NIC	ENSG00000184465.16	novel	2176	14	NA	NA	1	22	combination_of_known_splicesites	FALSE	canonical	3	7	junction_7	40.5112330101171	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAGCAGCCAAACAAATCC	5	True	NA	19	True	AATAAA	-45	NA	169702036	169657736	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_169658047_169658275_169658359_169659085_169659208_169659450_169659519_169660662_169660767_169662303_169662425_169664165_169664287_169670568_169670694_169672254_169672397_169688816_169689013_169701550
H1_mix_00075914	chr6	-	1592	12	FSM	ENSG00000130024.15	ENST00000366780.8	1589	12	0	-3	0	0	multi-exon	FALSE	canonical	3	50	junction_9	42.4587305704362	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCTTAAAATCTGCAGTT	1390	False	NA	-10	True	AATAAA	-20	NA	169723931	169703901	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_169704089_169705132_169705322_169705615_169705725_169710235_169710392_169712385_169712540_169714732_169714843_169715707_169715858_169715954_169716089_169717822_169717901_169718787_169718919_169721004_169721112_169723844
H1_mix_00075915	chr6	-	2300	12	FSM	ENSG00000130024.15	ENST00000339209.9	2167	12	21	-154	21	154	multi-exon	FALSE	canonical	3	126	junction_1	25.2098629524765	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTCCATAGCCCCAAAAG	14	True	NA	NA	False	NA	NA	NA	169724479	169703747	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_169704089_169705132_169705322_169705615_169705725_169710235_169710392_169712385_169712540_169714732_169714843_169715707_169715858_169715954_169716089_169717822_169717907_169718787_169718919_169721004_169721112_169723844
H1_mix_00075916	chr6	-	4395	9	FSM	ENSG00000130024.15	ENST00000612128.1	4395	9	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_6	15.483862567202	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCTGTCATCTTTTGCA	-14	True	NA	0	True	AATAAA	-23	NA	169724005	169707027	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_169710392_169712385_169712540_169714732_169714843_169715707_169715858_169715954_169716089_169717822_169717907_169718787_169718919_169721004_169721112_169723844
H1_mix_00075917	chr6	-	4385	9	ISM	ENSG00000130024.15	ENST00000366780.8	1589	12	-74	3127	0	-4	5prime_fragment	FALSE	canonical	3	50	junction_6	46.0174898815657	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGCCTCTGTCATCTTT	-14	True	NA	-4	True	AATAAA	-19	NA	169724005	169707031	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_169710392_169712385_169712540_169714732_169714843_169715707_169715858_169715954_169716089_169717822_169717901_169718787_169718919_169721004_169721112_169723844
H1_mix_00075918	chr6	-	1358	1	Genic_Genomic	ENSG00000232640.1_ENSG00000130024.15	novel	NA	NA	NA	NA	-242	352	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGCAGGGCGACCCCCGGC	NA	False	NA	NA	False	NA	NA	NA	169726096	169724738	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr6_-_169724700_169726100
H1_mix_00075922	chr6	-	3355	6	FSM	ENSG00000071994.11	ENST00000541970.6	3355	6	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_1	90.0653096369518	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATTGGTGATAGTGTTT	-19	True	NA	NA	False	AAAAAG	-20	NA	170584637	170575294	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_170577718_170578856_170578971_170580001_170580106_170583056_170583189_170583504_170583748_170584298
H1_mix_00075923	chr6	-	1118	5	FSM	ENSG00000071994.11	ENST00000167218.9	1118	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	220.559940832419	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACAGTGTCTACTTATTA	139	False	170584660	-1	True	AATAGA	-26	NA	170584645	170577435	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_170577718_170578856_170578971_170583056_170583189_170583504_170583748_170584298
H1_mix_00075926	chr6	-	1082	6	FSM	ENSG00000071994.11	ENST00000542896.5	1082	6	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	164.566582269913	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAGGAGTCTTTACTGTT	6	True	NA	-2	True	ATTAAA	-21	NA	170584612	170578481	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_170578657_170578856_170578971_170580001_170580106_170583056_170583189_170583504_170583748_170584298
H1_mix_00075928	chr6	-	2657	3	FSM	ENSG00000071994.11	ENST00000453163.6	2657	3	0	0	0	0	multi-exon	FALSE	canonical	3	552	junction_1	1.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCCTGGAGGTAGCTGT	6	True	NA	NA	False	AATAAA	-21	NA	170584612	170581088	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_170583189_170583504_170583748_170584298
H1_mix_00075929	chr6	-	1114	5	FSM	ENSG00000071994.11	ENST00000537445.5	1114	5	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_4	217.608593580309	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGCTTTTATTTTGAGA	3	True	NA	-12	True	AATAAA	-16	NA	170584615	170581744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_170582266_170583056_170583189_170583504_170583748_170584298_170584393_170584491
H1_mix_00075930	chr6	-	1290	4	FSM	ENSG00000071994.11	ENST00000614056.4	1287	4	0	-3	0	0	multi-exon	FALSE	canonical	3	186	junction_1	173.245490561804	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGCTTTTATTTTGAGA	92	False	NA	-12	True	AATAAA	-16	NA	170584692	170581744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_170582266_170583056_170583189_170583504_170583748_170584298
H1_mix_00075932	chr6	+	261	1	Intergenic	novelGene_1219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGGAAGATCTTGTGGTA	NA	False	NA	NA	False	NA	NA	NA	6028143	6028404	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_6028100_6028400
H1_mix_00075934	chr6	+	222	1	Intergenic	novelGene_1225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTAAAGCTTGTCTGGTTT	NA	False	NA	NA	False	AAAACA	-33	NA	14299341	14299563	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_14299300_14299600
H1_mix_00075935	chr6	+	1453	1	Intergenic	novelGene_1227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGGAGATAGGGGTGGGG	NA	False	NA	NA	False	NA	NA	NA	14301025	14302478	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_14301000_14302500
H1_mix_00075936	chr6	+	915	1	Intergenic	novelGene_1228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGCCAAGAGACATA	NA	False	NA	NA	False	NA	NA	NA	14684602	14685517	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_14684600_14685500
H1_mix_00075937	chr6	+	385	1	Intergenic	novelGene_1237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTACTCTGTAGCATTCCG	NA	False	NA	NA	False	AATAAA	-31	NA	21362218	21362603	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_21362200_21362600
H1_mix_00075938	chr6	+	912	1	Intergenic	novelGene_1239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCTAAGAGGTTTAGAAG	NA	False	NA	NA	False	AAAAAG	-45	NA	21363647	21364559	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_21363600_21364600
H1_mix_00075940	chr6	+	1456	1	Intergenic	novelGene_1245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTCTACTAAAAGTACACAAA	1115	False	NA	NA	False	NA	NA	NA	26159241	26160697	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_26159200_26160700
H1_mix_00075941	chr6	+	296	1	Intergenic	novelGene_1249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGATGCCAGTCTATG	NA	False	NA	NA	False	NA	NA	NA	26534196	26534492	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_26534200_26534500
H1_mix_00075942	chr6	+	316	1	Intergenic	novelGene_1250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAGTGAATTTTTAAAGC	NA	False	NA	NA	False	NA	NA	NA	26625252	26625568	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_26625300_26625600
H1_mix_00075943	chr6	+	256	1	Intergenic	novelGene_1255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAACAGTTGTTCTTTCA	NA	False	NA	NA	False	NA	NA	NA	27237392	27237648	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_27237400_27237600
H1_mix_00075944	chr6	+	290	1	Intergenic	novelGene_1256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GTCTCAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	27335433	27335723	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_27335400_27335700
H1_mix_00075945	chr6	+	307	1	Intergenic	novelGene_1258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	27594425	27594732	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_27594400_27594700
H1_mix_00075946	chr6	+	314	1	Intergenic	novelGene_1259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTACTCAACACGGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	27604165	27604479	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_27604200_27604500
H1_mix_00075947	chr6	+	308	1	Intergenic	novelGene_1261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	185	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAGTTAGTAATTCTTGAA	NA	False	NA	NA	False	NA	NA	NA	27693485	27693793	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_27693500_27693800
H1_mix_00075948	chr6	+	798	1	Intergenic	novelGene_1263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACGATTAGGATTGGCCAG	NA	False	NA	NA	False	NA	NA	NA	28675696	28676494	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_28675700_28676500
H1_mix_00075949	chr6	+	320	1	Intergenic	novelGene_1266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	260	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTGTTTGTTTGTTTT	1517	False	NA	NA	False	NA	NA	NA	28898108	28898428	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_28898100_28898400
H1_mix_00075950	chr6	+	1039	1	Intergenic	novelGene_1271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGAGGCCTTCTCCCGCCCC	1880	False	NA	NA	False	NA	NA	NA	37136775	37137814	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_37136800_37137800
H1_mix_00075951	chr6	+	896	1	Intergenic	novelGene_1273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTGAGTCACTTTGAAATA	NA	False	NA	NA	False	ATTAAA	-30	NA	54209670	54210566	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_54209700_54210600
H1_mix_00075952	chr6	+	309	1	Intergenic	novelGene_1274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAACAGTCTTAAATCA	NA	False	NA	NA	False	NA	NA	NA	56376980	56377289	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_56377000_56377300
H1_mix_00075954	chr6	+	635	1	Intergenic	novelGene_1278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTGTCATGTTGGCTCC	NA	False	NA	NA	False	NA	NA	NA	65305565	65306200	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_65305600_65306200
H1_mix_00075955	chr6	+	4028	1	Intergenic	novelGene_1282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTCTCCATCCAGCTTT	NA	False	NA	NA	False	NA	NA	NA	76872023	76876051	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_76872000_76876100
H1_mix_00075956	chr6	+	410	1	Intergenic	novelGene_1284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGAGGAGGTTCTGGAGG	NA	False	NA	NA	False	NA	NA	NA	77663618	77664028	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_77663600_77664000
H1_mix_00075957	chr6	+	283	1	Intergenic	novelGene_1285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACATAAAACTCATCCTTC	NA	False	NA	NA	False	NA	NA	NA	78587816	78588099	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_78587800_78588100
H1_mix_00075958	chr6	+	6030	1	Intergenic	novelGene_1287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCCGTCTCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85596823	85602853	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_85596800_85602900
H1_mix_00075959	chr6	+	400	1	Intergenic	novelGene_1289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCAGCAAAGATTATTTAT	NA	False	NA	NA	False	NA	NA	NA	90670628	90671028	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_90670600_90671000
H1_mix_00075961	chr6	+	1163	1	Intergenic	novelGene_1296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGCCTGTTTAGTGGTC	NA	False	NA	NA	False	AATAAA	-17	NA	97784121	97785284	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_97784100_97785300
H1_mix_00075962	chr6	+	211	1	Intergenic	novelGene_1299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCAAGCCCAAATTTCTTC	NA	False	NA	NA	False	NA	NA	NA	102105133	102105344	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_102105100_102105300
H1_mix_00075963	chr6	+	603	1	Intergenic	novelGene_1303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAACCTATTACAGTTCAA	NA	False	NA	NA	False	AAAAAG	-7	NA	109479346	109479949	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_109479300_109479900
H1_mix_00075967	chr6	+	215	1	Intergenic	novelGene_1307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGCGTGGAAACCTAGAGTG	NA	False	NA	NA	False	NA	NA	NA	120462633	120462848	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_120462600_120462800
H1_mix_00075969	chr6	+	1757	1	Intergenic	novelGene_1309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAACGAAACTGTAAGCCA	NA	False	NA	NA	False	AGTAAA	-29	NA	121622621	121624378	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_121622600_121624400
H1_mix_00075970	chr6	+	2151	1	Intergenic	novelGene_1311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	204	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGGACGCGCATGAAAGGG	3611	False	NA	NA	False	AATAAA	-43	NA	122843401	122845552	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_122843400_122845600
H1_mix_00075971	chr6	+	209	1	Intergenic	novelGene_1314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	270	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATTTTTACATCTTGGG	NA	False	NA	NA	False	AAAACA	-41	NA	129157313	129157522	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_129157300_129157500
H1_mix_00075972	chr6	+	5959	1	Intergenic	novelGene_1317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGCAGCAGCAGCAGC	NA	False	NA	NA	False	NA	NA	NA	135029825	135035784	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_135029800_135035800
H1_mix_00075975	chr6	+	557	1	Intergenic	novelGene_1323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	240	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTGCTAAAAATCTGATT	9765	False	NA	NA	False	AATGAA	-19	NA	147329621	147330178	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_147329600_147330200
H1_mix_00075976	chr6	+	1042	1	Intergenic	novelGene_1324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTCAATGTCAAGATCCCA	NA	False	NA	NA	False	ATTAAA	-19	NA	153923418	153924460	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_153923400_153924500
H1_mix_00075977	chr6	+	272	1	Intergenic	novelGene_1325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATAACCATTTCTAAAA	NA	False	NA	NA	False	NA	NA	NA	157235342	157235614	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_157235300_157235600
H1_mix_00075979	chr6	+	6918	1	Intergenic	novelGene_1326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAAGAGATAAAGAGG	NA	False	NA	NA	False	NA	NA	NA	166980874	166987792	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_166980900_166987800
H1_mix_00075980	chr6	+	429	1	Intergenic	novelGene_1327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGCCTAAAGGGTTCTAG	2608	False	NA	NA	False	NA	NA	NA	167273955	167274384	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_167274000_167274400
H1_mix_00075982	chr6	+	3415	6	FSM	ENSG00000112679.15	ENST00000603795.5	1166	6	-365	-1884	0	0	multi-exon	FALSE	canonical	3	89	junction_3	38.2601620487943	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCGCGTGCGATGCATTCT	9	True	NA	16	True	AATAAA	-22	NA	292096	351355	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_292561_304627_304662_311879_311963_345853_345929_348102_348275_348768
H1_mix_00075983	chr6	+	439	1	FSM	ENSG00000272465.1	ENST00000606542.1	701	1	235	27	235	-27	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTCCATTAAAATGTCT	6899	False	NA	NA	False	NA	NA	NA	2437783	2438222	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_2437800_2438200
H1_mix_00075984	chr6	+	886	2	FSM	ENSG00000244041.7	ENST00000450238.5	886	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCGTGTAATGTCAGCAA	0	True	NA	NA	False	AAAAAG	-31	NA	2987966	2990348	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_2988032_2989527
H1_mix_00075985	chr6	+	284	3	NIC	ENSG00000244041.7	novel	886	2	NA	NA	12	-359	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	10	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATGAGAACAGGATGATG	12	False	NA	NA	False	NA	NA	NA	2987978	2989893	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_2988032_2989527_2989734_2989868
H1_mix_00075987	chr6	+	1508	10	FSM	ENSG00000124588.22	ENST00000338130.7	1508	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	530.276401255416	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGATACTTTTTTCTT	3	True	NA	15	True	AATAAA	-16	NA	2999973	3019755	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_3000086_3002049_3002287_3003668_3003790_3004494_3004652_3006467_3006560_3010024_3010190_3012543_3012675_3015529_3015644_3016883_3016986_3019478
H1_mix_00075989	chr6	+	851	6	FSM	ENSG00000124588.22	ENST00000380454.8	851	6	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_4	352.902026063892	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGATACTTTTTTCTT	12	False	NA	15	True	AATAAA	-16	NA	3000001	3019755	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_3000086_3006467_3006560_3010024_3010190_3012543_3012675_3016883_3016986_3019478
H1_mix_00075991	chr6	+	1900	1	Genic_Genomic	ENSG00000288612.1	novel	NA	NA	NA	NA	2056	1	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCAAGCGAGAGTGGAAC	1419	False	NA	7	True	AATAAA	-19	NA	3025527	3027427	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr6_+_3025500_3027400
H1_mix_00075996	chr6	+	3496	18	NIC	ENSG00000112739.17	novel	2364	19	NA	NA	99	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_6	133.613111885848	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGTCTCCTGGTTTTTTT	27	True	NA	15	True	AATAAA	-19	NA	4021398	4064983	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_4021467_4031558_4032756_4037396_4037571_4040771_4040928_4042486_4042569_4043812_4044024_4049015_4049107_4049731_4049880_4051956_4052095_4052719_4052874_4056320_4056436_4057035_4057188_4058727_4058815_4060412_4060687_4061014_4061148_4062212_4062300_4063073_4063120_4064800
H1_mix_00076000	chr6	+	1232	3	FSM	ENSG00000272142.4	ENST00000663198.1	1278	3	46	0	8	0	multi-exon	FALSE	canonical	0	0	junction_2	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATGCATACACCAAACAT	17	True	NA	NA	False	TATAAA	-23	NA	5003823	5043590	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_5003960_5021380_5021474_5042587
H1_mix_00076001	chr6	+	8644	13	NNC	ENSG00000124782.21	novel	9067	7	NA	NA	-144	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	25.0481480796929	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGCCGGTCACGTGGCCG	94	False	NA	12	True	AATAAA	-22	NA	7108487	7251980	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_7108703_7176654_7176774_7181123_7181159_7181877_7182083_7187433_7187524_7189158_7189323_7210803_7210949_7211572_7211710_7226466_7226657_7228996_7231908_7240437_7240603_7246423_7247222_7248510
H1_mix_00076002	chr6	+	957	8	FSM	ENSG00000124784.9	ENST00000475351.5	960	8	3	0	3	0	multi-exon	FALSE	canonical	3	24	junction_2	104.211127926309	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAATGGTGAAAACTTGG	-33	True	NA	NA	False	NA	NA	NA	7389795	7402848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_7390074_7393098_7393304_7395020_7395144_7396702_7396773_7398697_7398741_7400957_7401051_7402602_7402716_7402816
H1_mix_00076005	chr6	+	781	8	FSM	ENSG00000168566.13	ENST00000634363.1	781	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	47.6950346108545	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACATGGAAGAACTCAGCAA	-6	True	NA	NA	False	GATAAA	-5	NA	7590225	7605421	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_7590414_7593733_7593848_7594098_7594160_7595026_7595102_7599672_7599681_7601335_7601525_7602622_7602745_7605397
H1_mix_00076007	chr6	+	4286	3	FSM	ENSG00000111846.20	ENST00000379597.7	4525	3	239	0	239	0	multi-exon	FALSE	canonical	1	3	junction_1	128.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCGGGGATACTGTGTAT	79	False	NA	11	True	AATAAA	-18	NA	10528594	10629367	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_10529837_10621350_10621444_10626416
H1_mix_00076011	chr6	+	483	4	FSM	ENSG00000137210.14	ENST00000467229.1	483	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	521.989144203849	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAAGCTTTGCAGGTATTT	3315	False	NA	30	True	AATAAA	-22	NA	10751169	10829205	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_10751235_10755141_10755233_10770076_10770205_10829006
H1_mix_00076012	chr6	+	9053	9	FSM	ENSG00000095951.17	ENST00000379388.7	9053	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	11.0764389584379	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTGCTTCAGTTGTGCCT	-1	True	NA	7	True	AGTAAA	-20	NA	12012311	12164999	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_12012567_12015525_12015669_12089183_12089238_12119889_12125871_12129758_12129893_12130766_12130943_12135790_12135893_12161438_12161930_12163282
H1_mix_00076013	chr6	+	752	5	FSM	ENSG00000112137.19	ENST00000406205.7	792	5	40	0	40	0	multi-exon	FALSE	canonical	0	0	junction_1	5.80409338312195	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGAGTCTGGAGTCCTCC	-3	True	NA	NA	False	NA	NA	NA	12749474	13184820	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_12749791_13053364_13053530_13160203_13160285_13182518_13182687_13184798
H1_mix_00076014	chr6	+	604	3	FSM	ENSG00000112137.19	ENST00000379329.1	707	3	103	0	103	0	multi-exon	FALSE	canonical	3	15	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGCCGGCATCCAACGAG	138	False	NA	NA	False	NA	NA	NA	13272859	13283907	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_13272916_13278267_13278330_13283421
H1_mix_00076015	chr6	+	3878	10	FSM	ENSG00000124523.17	ENST00000680432.1	3900	10	22	0	13	0	multi-exon	FALSE	canonical	2	15	junction_1	48.3988062295388	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGTATGTGTATATACCA	NA	False	NA	NA	False	AATAAA	-18	NA	13574248	13614558	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_13574307_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13599031_13599156_13600833_13600950_13611789
H1_mix_00076016	chr6	+	3458	9	FSM	ENSG00000124523.17	ENST00000680852.1	3401	9	-47	-10	8	10	multi-exon	FALSE	canonical	3	130	junction_7	19.2933764541098	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCCGTCTCAAAAAAAAAAAA	230	False	NA	NA	False	NA	NA	NA	13574536	13603268	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_13574625_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13599031_13599156_13600833
H1_mix_00076018	chr6	+	1022	1	FSM	ENSG00000272209.1	ENST00000607518.1	1143	1	-36	157	-36	-157	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTTTGTGGCTATATAT	NA	False	NA	NA	False	ATTAAA	-9	NA	13825395	13826417	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_13825400_13826400
H1_mix_00076019	chr6	+	3274	2	FSM	ENSG00000180537.13	ENST00000537388.1	3274	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTTTGATTTCTCTGAC	14	False	NA	9	True	ATTAAA	-21	NA	13925192	13980008	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_13925367_13976908
H1_mix_00076021	chr6	+	5943	17	NIC	ENSG00000008083.14	novel	6003	18	NA	NA	-98	-14	combination_of_known_splicesites	FALSE	canonical	3	60	junction_2	160.023423578394	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCTTGTGGAAGATG	-6	True	NA	19	True	AATAAA	-21	NA	15245970	15522026	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_15246585_15374116_15374253_15452005_15452176_15468541_15468719_15487306_15487543_15496131_15497171_15500906_15501410_15504499_15504593_15507135_15507255_15507345_15507417_15508339_15508455_15511295_15511402_15512207_15512391_15512914_15513046_15513238_15513423_15517160_15517269_15520068
H1_mix_00076022	chr6	+	2878	6	NIC	ENSG00000007944.15	novel	3072	7	NA	NA	-3	-32	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	36.1253373686669	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATTCGGGATAATAAAGA	-4	True	NA	-21	True	NA	NA	NA	16129082	16148216	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_16129410_16130556_16130748_16141624_16141811_16143019_16143218_16144896_16145318_16146661
H1_mix_00076023	chr6	+	617	2	FSM	ENSG00000137198.10	ENST00000540478.1	793	2	176	0	176	0	multi-exon	FALSE	canonical	3	53	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGCTCAGCAGGAGGGCA	1084	False	NA	NA	False	NA	NA	NA	16290120	16295121	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_16290622_16295005
H1_mix_00076024	chr6	+	3115	1	FSM	ENSG00000272341.1	ENST00000606924.1	2538	1	-591	14	-591	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTAAACTTCATTTTAC	364	False	NA	NA	False	AATAAA	-5	NA	16763754	16766869	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_16763800_16766900
H1_mix_00076025	chr6	+	1820	12	FSM	ENSG00000112186.13	ENST00000378990.6	1812	12	-8	0	4	0	multi-exon	FALSE	canonical	0	0	junction_3	33.3114528737788	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATAAAACCTTTGAG	15	False	NA	NA	False	AAAAAG	-41	NA	17393636	17556795	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_17393747_17421554_17421677_17426589_17426691_17507168_17507313_17507640_17507727_17513848_17513955_17539268_17539459_17540972_17541149_17542836_17542961_17543060_17543144_17551463_17551605_17556358
H1_mix_00076026	chr6	+	2822	22	NNC	ENSG00000165097.16	novel	4538	22	NA	NA	-3	-3478	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_21	6.91542690306974	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGCTGTGTAAATGTCAT	13	True	NA	NA	False	ATTAAA	-17	NA	18155448	18218565	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_18155572_18155882_18155927_18159882_18159983_18161326_18161455_18162834_18162925_18166266_18166379_18171362_18171480_18185771_18185811_18187791_18188003_18191196_18191382_18197056_18197234_18197586_18197662_18200438_18200577_18201485_18201658_18205536_18205665_18207397_18207530_18208131_18208207_18212487_18212605_18213655_18213782_18215006_18215130_18217732_18217886_18218308
H1_mix_00076027	chr6	+	5385	8	FSM	ENSG00000137393.10	ENST00000259939.4	5032	8	-128	-225	-128	225	multi-exon	FALSE	canonical	2	18	junction_3	5.52175659716791	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCAAGGTGGGCGGATCA	3114	False	NA	NA	False	NA	NA	NA	18387221	18469095	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_18387631_18399498_18399700_18427580_18427686_18439683_18439745_18457154_18457360_18459606_18459752_18463290_18463381_18464926
H1_mix_00076028	chr6	+	1058	2	ISM	ENSG00000172201.12	ENST00000378700.8	3873	3	0	3382	0	-3382	5prime_fragment	FALSE	canonical	3	300	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTAGAACTCGAGGTTCA	-6	True	NA	NA	False	AGTAAA	-11	NA	19837369	19838815	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_19838196_19838583
H1_mix_00076029	chr6	+	4906	2	Genic_Genomic	ENSG00000124766.7	novel	4869	1	NA	NA	-15	33294	multi-exon	FALSE	non_canonical	0	0	junction_1	0	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	4739	False	NA	NA	False	NA	NA	NA	21593735	21631913	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr6_+_21598616_21631887
H1_mix_00076031	chr6	+	1143	3	FSM	ENSG00000272168.9	ENST00000691204.1	1401	3	-23	281	-23	-281	multi-exon	FALSE	canonical	3	22	junction_1	42.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTTAACCTTTATGGC	1225	False	NA	NA	False	NA	NA	NA	21665485	21669433	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_21665762_21666565_21666646_21668646
H1_mix_00076032	chr6	+	1626	9	FSM	ENSG00000272168.9	ENST00000653997.1	1616	9	-10	0	-9	0	multi-exon	FALSE	canonical	0	0	junction_5	32.6486982895184	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTGTTGTCCACACAGA	193	False	NA	51	True	GATAAA	-40	NA	21666378	22194412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_21666646_21668646_21668900_21783631_21783709_21909469_21909604_21978944_21979063_22056545_22056691_22110746_22110921_22191566_22191657_22194044
H1_mix_00076033	chr6	+	272	1	FSM	ENSG00000280443.1	ENST00000624804.1	202	1	4	-74	4	74	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGGATCAGATGATACTAA	9952	False	NA	NA	False	NA	NA	NA	21822539	21822811	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_21822500_21822800
H1_mix_00076035	chr6	+	3984	1	FSM	ENSG00000222515.1	ENST00000410583.1	375	1	-3492	-117	-3492	117	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTTCAGCAACCTTGAAA	NA	False	NA	NA	False	TTTAAA	-17	NA	22082051	22086035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_22082100_22086000
H1_mix_00076036	chr6	+	5161	2	NNC	ENSG00000272168.9	novel	1435	3	NA	NA	7714	49	intron_retention	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTATTTATTTTGCTTA	7675	False	NA	NA	False	NA	NA	NA	22121087	22151717	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_22121119_22146587
H1_mix_00076037	chr6	+	473	1	FSM	ENSG00000146049.2	ENST00000274766.2	1383	1	491	419	491	-419	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACGAATCCACAGGTGAAAG	NA	False	NA	NA	False	NA	NA	NA	24357393	24357866	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_24357400_24357900
H1_mix_00076038	chr6	+	473	1	FSM	ENSG00000272402.1	ENST00000606921.1	405	1	-153	85	-153	-85	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTCTAAAAGGCAAAATAAGG	8618	False	NA	NA	False	NA	NA	NA	24706593	24707066	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_24706600_24707100
H1_mix_00076039	chr6	+	377	4	FSM	ENSG00000112312.10	ENST00000378059.3	688	4	311	0	311	0	multi-exon	FALSE	canonical	3	1016	junction_3	70.7358152250722	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGAAAAACGGAGAAAGGCG	349	False	NA	NA	False	NA	NA	NA	24777176	24784119	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_24777298_24780662_24780741_24781476_24781622_24784086
H1_mix_00076040	chr6	+	302	1	Genic_Genomic	ENSG00000214975.4	novel	NA	NA	NA	NA	467	205	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAACAACAAAAAGAAACGAG	508	False	NA	NA	False	AATAAA	-14	NA	24976885	24977187	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr6_+_24976900_24977200
H1_mix_00076042	chr6	+	847	1	FSM	ENSG00000197061.5	ENST00000377803.4	405	1	1	-443	1	443	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	0	True	NA	NA	False	NA	NA	NA	26103933	26104780	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26103900_26104800
H1_mix_00076043	chr6	+	1517	2	FSM	ENSG00000180573.10	ENST00000602637.1	1462	2	-31	-24	0	-8	multi-exon	FALSE	canonical	2	20	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGAAAGCATGTGTCATT	-8	True	NA	7	True	AATAAA	-16	NA	26124171	26139108	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26124634_26138053
H1_mix_00076044	chr6	+	353	1	FSM	ENSG00000168298.7	ENST00000304218.6	787	1	178	256	178	-256	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCGAAGAAGCCGGCTGCA	177	False	NA	NA	False	NA	NA	NA	26156506	26156859	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26156500_26156900
H1_mix_00076045	chr6	+	470	1	FSM	ENSG00000274290.3	ENST00000614097.3	470	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTTCACAATTGGAGCTA	-3	True	NA	NA	False	AGTAAA	-28	NA	26183760	26184230	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26183800_26184200
H1_mix_00076046	chr6	+	499	1	FSM	ENSG00000217275.2	ENST00000405418.2	499	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGAGAGGATTGTTTTGC	2638	False	NA	NA	False	AGTAAA	-1	NA	26202155	26202654	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26202200_26202700
H1_mix_00076047	chr6	+	1355	1	FSM	ENSG00000276966.3	ENST00000615164.3	412	1	62	-1005	62	1005	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTACTTCCTGCTTGGATC	64	False	NA	-1	True	AATAAA	-6	NA	26204671	26206026	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26204700_26206000
H1_mix_00076048	chr6	+	3646	10	FSM	ENSG00000186470.14	ENST00000508906.6	3733	10	41	46	2	-38	multi-exon	TRUE	canonical	2	4	junction_9	2.44948974278318	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTCTAGTTGTTCAATAA	5	True	NA	-25	True	NA	NA	NA	26365199	26378274	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26365353_26367989_26368051_26368564_26368913_26370321_26370604_26372896_26373098_26373275_26373297_26373386_26373414_26374326_26374374_26374770_26374799_26375796
H1_mix_00076052	chr6	+	1878	10	FSM	ENSG00000026950.17	ENST00000425234.6	1882	10	4	0	4	0	multi-exon	FALSE	canonical	0	0	junction_9	4	2718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTATTGGGTTAGGCAGAG	-11	True	NA	NA	False	AAGAAA	-41	NA	26402253	26412920	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26402413_26405371_26405649_26405908_26406257_26407670_26407953_26409532_26409734_26409893_26409915_26410005_26410033_26411108_26411136_26411554_26411582_26412411
H1_mix_00076054	chr6	+	1724	1	FSM	ENSG00000261584.1	ENST00000562904.1	1724	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCACTGGCATTAACTCAA	NA	False	NA	NA	False	CATAAA	-32	NA	26686240	26687964	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26686200_26688000
H1_mix_00076055	chr6	+	1527	1	Intergenic	novelGene_1251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	586	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAATTTGTTTTCTTGGTCG	1	True	NA	NA	False	AATAAA	-16	NA	26722682	26724209	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_26722700_26724200
H1_mix_00076056	chr6	+	1294	1	FSM	ENSG00000276180.2	ENST00000615353.2	397	1	-694	-203	-694	203	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGTTTACCGCTCGGATTA	5287	False	NA	NA	False	NA	NA	NA	27138587	27139881	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_27138600_27139900
H1_mix_00076057	chr6	+	2216	8	ISM	ENSG00000112812.16	ENST00000230582.8	2887	12	2985	164	-385	0	3prime_fragment	FALSE	canonical	1	1	junction_1	47.7984714980617	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTTGTATGCACAGAG	2959	False	NA	22	True	AATAAA	-19	NA	27250685	27256456	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_27250807_27251041_27251120_27251216_27251265_27251749_27252041_27252807_27252950_27254692_27254873_27254985_27255132_27255246
H1_mix_00076059	chr6	+	1817	3	FSM	ENSG00000112812.16	ENST00000377456.6	1809	3	-8	0	-8	0	multi-exon	FALSE	canonical	2	3	junction_1	68.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTTGTATGCACAGAG	54	False	NA	22	True	AATAAA	-19	NA	27251579	27256456	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_27252041_27254985_27255132_27255246
H1_mix_00076061	chr6	+	4042	3	FSM	ENSG00000124613.9	ENST00000244576.9	4042	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	16.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGCCTATAGCTTTTTA	-5	True	NA	25	True	AATAAA	-29	NA	27388758	27403908	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_27389076_27399441_27399551_27400292
H1_mix_00076062	chr6	+	1131	5	FSM	ENSG00000281706.4	ENST00000693645.1	1598	5	46	421	0	1	multi-exon	FALSE	canonical	3	7	junction_4	4.14578098794425	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGACGGGTGGAATTGTG	16	True	NA	10	True	AATAAA	-23	NA	27694072	27713285	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_27694507_27702313_27702418_27710123_27710226_27710680_27710890_27713003
H1_mix_00076063	chr6	+	1008	4	NIC	ENSG00000287252.2	novel	1223	4	NA	NA	206	-10	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	2.94392028877595	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTACTAATTGGTTATAT	222	False	NA	78	True	AATAAA	-14	NA	27757652	27763259	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_27757742_27761724_27761842_27762301_27762364_27762519
H1_mix_00076065	chr6	+	834	1	FSM	ENSG00000220721.2	ENST00000402365.2	945	1	365	-254	365	254	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCCGTCTCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	28073680	28074514	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_28073700_28074500
H1_mix_00076067	chr6	+	2057	6	FSM	ENSG00000198315.11	ENST00000606198.5	2057	6	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_2	16.3389106124001	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACAACTTTAGTGTCAGAA	37	True	NA	NA	False	ACTAAA	-15	NA	28141909	28154111	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_28142030_28148315_28148839_28149482_28149625_28151844_28151937_28152260_28152385_28153055
H1_mix_00076068	chr6	+	887	2	FSM	ENSG00000226314.9	ENST00000570126.1	962	2	-18	93	5	-93	multi-exon	FALSE	canonical	2	3	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTTAACAACAACTGCTG	-4	True	NA	NA	False	NA	NA	NA	28161773	28163418	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_28161822_28162579
H1_mix_00076071	chr6	+	2922	4	FSM	ENSG00000197062.12	ENST00000619937.4	2729	4	-216	23	0	0	multi-exon	FALSE	canonical	3	17	junction_1	19.131126469709	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCCTGCAGATTTATTT	-2	True	NA	11	True	AATAAA	-11	NA	28267142	28278201	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_28267454_28271853_28272340_28272669_28272788_28276194
H1_mix_00076072	chr6	+	3170	2	ISM	ENSG00000137338.6	ENST00000259883.3	3100	7	16252	-1176	16252	1176	3prime_fragment	FALSE	canonical	3	67	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGGTTGGTTTCACTTTT	NA	False	NA	38	True	AATACA	-8	NA	28297823	28303725	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_28297992_28300723
H1_mix_00076075	chr6	+	410	2	FSM	ENSG00000224157.1	ENST00000444986.1	413	2	0	3	0	-3	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCGTCTTAACTCTTGTA	NA	False	NA	NA	False	AATAAA	-13	NA	28896529	28897319	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_28896731_28897110
H1_mix_00076077	chr6	+	845	1	FSM	ENSG00000204657.4	ENST00000383640.4	1514	1	32	637	32	-637	mono-exon	FALSE	NA	NA	NA	NA	NA	182	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCCACCATCATCCACCC	NA	False	NA	NA	False	NA	NA	NA	29587486	29588331	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_29587500_29588300
H1_mix_00076079	chr6	+	814	4	FSM	ENSG00000204642.14	ENST00000484704.5	1201	4	0	387	0	-386	multi-exon	FALSE	canonical	3	19	junction_3	1.4142135623731	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGGCTCTGACCAGGTCC	444	False	NA	NA	False	NA	NA	NA	29724156	29726139	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_29724449_29725030_29725307_29725446_29725564_29726010
H1_mix_00076080	chr6	+	560	4	Fusion	ENSG00000206341.7_ENSG00000206503.13_ENSG00000204642.14	novel	1201	4	NA	NA	-29	0	multi-exon	FALSE	canonical	3	129	junction_1	347.770997448992	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCCAGAGTCCACGTGTT	1792	False	NA	15	True	AATAAA	-16	NA	29725504	29945870	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr6_+_29725564_29890263_29890297_29945233_29945282_29945450
H1_mix_00076081	chr6	+	1525	6	FSM	ENSG00000204632.13	ENST00000478355.5	1525	6	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_2	6.28012738724303	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTACACGTGTTTCTTGTG	20	False	NA	12	True	AATAAA	-23	NA	29827844	29831125	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_29827918_29828046_29828317_29828542_29828819_29829417_29829933_29830377_29830411_29830767
H1_mix_00076082	chr6	+	464	2	ISM	ENSG00000206341.7	ENST00000383620.4	1096	7	778	904	778	-904	internal_fragment	FALSE	canonical	1	3	junction_1	0	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGAGCCCCTCACCCTGA	363	False	NA	NA	False	NA	NA	NA	29888529	29889578	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_29888743_29889327
H1_mix_00076083	chr6	+	1765	6	FSM	ENSG00000243753.6	ENST00000482052.6	1785	6	20	0	11	0	multi-exon	FALSE	canonical	1	1	junction_5	9.47839648885823	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGGGATTTCATAATGC	20	False	NA	NA	False	AATAAA	-16	NA	30259583	30293014	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30260085_30260396_30260608_30261203_30261480_30261586_30261704_30262294_30262343_30292402
H1_mix_00076084	chr6	+	3494	8	NIC	ENSG00000204599.15	novel	3624	8	NA	NA	2	-9	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	40.3181227292165	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAAGTGATCTCTGTGTT	39	False	NA	17	True	NA	NA	NA	30326480	30343719	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_30326888_30328888_30329042_30329310_30329771_30330780_30330877_30335744_30335976_30339907_30339931_30340504_30340621_30341711
H1_mix_00076086	chr6	+	3153	8	NNC	ENSG00000204599.15	novel	3198	9	NA	NA	123	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_7	42.896648458587	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTGTGTTGTGTGGTAA	265	False	NA	26	True	NA	NA	NA	30327645	30343728	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_30327697_30328908_30329042_30329310_30329771_30330780_30330877_30335744_30335976_30339907_30339931_30340504_30340621_30341685
H1_mix_00076087	chr6	+	245	1	FSM	ENSG00000224936.1	ENST00000425839.1	1370	1	59	1066	59	-1066	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGGAACATTTGAAAGT	NA	False	NA	NA	False	NA	NA	NA	30468940	30469185	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30468900_30469200
H1_mix_00076090	chr6	+	3221	2	FSM	ENSG00000204576.12	ENST00000470703.1	3429	2	208	0	208	0	multi-exon	FALSE	canonical	3	42	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTTCTAGTCATCT	2875	False	NA	79	True	AATAAA	-28	NA	30560238	30563723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30562125_30562388
H1_mix_00076091	chr6	+	2164	11	FSM	ENSG00000137343.18	ENST00000329992.12	2119	11	-45	0	-1	0	multi-exon	FALSE	canonical	3	16	junction_10	62.6277893590377	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCAGCCTCATTTGTGC	8994	False	NA	53	True	AAAAAG	-17	NA	30626840	30644679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30642175_30642248_30642767_30643012_30643528
H1_mix_00076092	chr6	+	2659	10	FSM	ENSG00000137343.18	ENST00000376483.8	2646	10	-13	0	7	0	multi-exon	FALSE	canonical	3	133	junction_9	37.513783475108	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCAGCCTCATTTGTGC	-4	True	NA	53	True	AAAAAG	-17	NA	30626862	30644679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30642175_30642248_30642767
H1_mix_00076093	chr6	+	1140	11	NIC	ENSG00000137343.18	novel	1195	12	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	36	junction_7	67.7728559232972	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGAGCTGTTGAAAAATTT	7	True	NA	9	True	AATAAA	-18	NA	30626873	30646818	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30642175_30642248_30645894_30645975_30646066_30646110_30646468
H1_mix_00076094	chr6	+	1749	13	FSM	ENSG00000137343.18	ENST00000330083.6	1738	13	-11	0	7	0	multi-exon	FALSE	canonical	2	14	junction_1	57.9436987274908	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTGTTGAAAAATTTGAC	-4	True	NA	12	True	AATAAA	-21	NA	30626862	30646821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30627275_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30642175_30642248_30642767_30643012_30645894_30645975_30646066_30646110_30646468
H1_mix_00076096	chr6	+	1602	10	ISM	ENSG00000137343.18	ENST00000471782.5	1527	11	6	11	6	-9	intron_retention	FALSE	canonical	3	52	junction_9	55.1478372252012	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCACAAGAGCTGTTGAA	11	False	NA	3	True	AATAAA	-12	NA	30626925	30646812	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30642175_30642248_30645894
H1_mix_00076100	chr6	+	4774	19	NIC	ENSG00000204580.14	novel	4148	20	NA	NA	4	822	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	192.93538226151	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCATAAGCCATATTTGA	13	True	NA	22	True	AATAAA	-22	NA	30880990	30900978	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_30881126_30884537_30884711_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30895403_30895515_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
H1_mix_00076101	chr6	+	4588	17	NIC	ENSG00000204580.14	novel	3942	21	NA	NA	0	817	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	161.215972669429	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAATGAGCATAAGCCATA	-14	True	NA	17	True	AATAAA	-17	NA	30882927	30900973	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_30883166_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
H1_mix_00076102	chr6	+	4677	18	NIC	ENSG00000204580.14	novel	3942	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	16	junction_1	190.880893677011	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACTGTGTGAGTGGGTTC	13	True	NA	21	True	AATAAA	-14	NA	30882954	30900152	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_30883930_30884537_30884711_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
H1_mix_00076104	chr6	+	4656	18	NIC	ENSG00000204580.14	novel	2882	17	NA	NA	0	822	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	170.507628014329	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCATAAGCCATATTTGA	34	False	NA	22	True	AATAAA	-22	NA	30882975	30900978	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_30883166_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30895403_30895515_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
H1_mix_00076105	chr6	+	3975	19	NIC	ENSG00000204580.14	novel	3857	19	NA	NA	-32	-1	combination_of_known_junctions	FALSE	canonical	3	14	junction_13	223.53454175591	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAACTGTGTGAGTGGGTT	226	False	NA	20	True	AATAAA	-13	NA	30884320	30900151	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_30884711_30885624_30885681_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30895403_30895515_30896730_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
H1_mix_00076110	chr6	+	659	4	FSM	ENSG00000213780.11	ENST00000475845.1	659	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	4.24264068711928	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGGTCCCGGGCGCCTCC	4016	False	NA	40	True	AATAAA	-17	NA	30912222	30914106	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30912459_30913109_30913158_30913308_30913388_30913810
H1_mix_00076111	chr6	+	4064	29	FSM	ENSG00000137411.19	ENST00000672801.1	4064	29	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_11	29.4634631919825	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATGTCTGTTTATGGCT	5998	False	NA	14	True	GATAAA	-14	NA	30914204	30926456	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30915038_30915155_30915238_30915354_30915456_30915745_30915868_30915980_30916048_30916151_30916250_30916877_30916960_30917104_30917225_30917694_30917807_30918826_30918916_30919757_30919849_30920094_30920217_30920332_30920437_30920667_30920750_30921064_30921142_30921229_30921306_30921588_30921692_30921924_30921996_30922115_30922242_30922449_30922555_30922705_30922775_30922897_30922977_30923103_30923232_30923352_30923506_30924353_30924561_30925273_30925386_30925543_30925720_30925879_30926009_30926108
H1_mix_00076114	chr6	+	298	2	Antisense	novelGene_ENSG00000277402.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	354	junction_1	0	63	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCCCCGGCCCCGCGGT	1078	False	NA	NA	False	NA	NA	NA	31271049	31356441	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr6_+_31271143_31356236
H1_mix_00076116	chr6	+	2434	6	FSM	ENSG00000204516.10	ENST00000538442.5	2411	6	-23	0	-23	0	multi-exon	FALSE	canonical	0	0	junction_1	30.6698549067321	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTTCTGGTCTGTGTTTT	NA	False	NA	NA	False	TTTAAA	-4	NA	31494857	31511123	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31494996_31505616_31505872_31506142_31506431_31507021_31507301_31507399_31507532_31509781
H1_mix_00076117	chr6	+	1504	3	ISM	ENSG00000204498.11	ENST00000376146.8	1411	4	79	0	79	0	intron_retention	FALSE	canonical	3	31	junction_1	23.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCAGTGTCTCCTCTGTC	0	True	NA	31	True	NA	NA	NA	31546948	31558829	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_31546974_31548162_31548440_31557627
H1_mix_00076120	chr6	+	2488	8	FSM	ENSG00000263020.6	ENST00000375880.6	2487	8	-1	0	-1	0	multi-exon	FALSE	canonical	1	1	junction_6	506.559382662354	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCACATTGTTTGTGG	10	True	NA	17	True	AATAAA	-18	NA	31666100	31673546	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31666209_31666820_31666904_31667867_31667971_31668538_31668655_31669096_31669173_31669318_31669509_31671155_31671285_31671863
H1_mix_00076121	chr6	+	5048	24	Fusion	ENSG00000204410.16_ENSG00000228727.9	novel	2721	25	NA	NA	132	-11	intron_retention	TRUE	canonical	3	20	junction_8	10.7335842041545	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCAAAAATGTCTTTGGT	1593	False	NA	23	True	AATAAA	-27	NA	31739808	31764840	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr6_+_31740063_31740453_31740614_31741162_31741287_31742876_31742958_31743107_31743171_31743903_31744026_31744189_31744300_31744545_31744582_31747386_31747433_31753300_31753440_31753566_31753630_31758164_31758294_31758547_31758621_31758765_31758876_31759096_31759178_31759424_31759513_31759785_31759976_31760089_31760217_31760689_31760840_31761187_31761263_31761471_31761616_31761817_31762186_31762419_31764160_31764265
H1_mix_00076124	chr6	+	725	3	FSM	ENSG00000204387.14	ENST00000648677.1	712	3	-13	0	-13	0	multi-exon	FALSE	canonical	1	1	junction_1	337	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACGTGGTTTGGTCTCA	280	False	NA	16	True	AATAAA	-16	NA	31834894	31839761	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31835201_31837235_31837436_31839542
H1_mix_00076125	chr6	+	867	4	FSM	ENSG00000204351.12	ENST00000494058.5	867	4	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_1	5.35412613473634	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGTAGAGGGTGGGCT	7732	False	NA	NA	False	NA	NA	NA	31967020	31968448	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31967142_31967272_31967378_31967714_31967863_31967955
H1_mix_00076130	chr6	+	961	6	FSM	ENSG00000221988.13	ENST00000414204.5	954	6	-7	0	-7	0	multi-exon	FALSE	canonical	3	11	junction_1	88.5189245302947	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGGGGATGCTGAACT	NA	False	NA	NA	False	NA	NA	NA	32153433	32155978	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_32153637_32154195_32154405_32154586_32154778_32155029_32155184_32155687_32155784_32155870
H1_mix_00076132	chr6	+	2851	16	FSM	ENSG00000258388.7	ENST00000428388.6	2878	16	27	0	27	0	multi-exon	FALSE	canonical	3	20	junction_8	76.6363418287231	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTCCCACCCTCTCCTT	328	False	NA	15	True	AATAAA	-17	NA	32153871	32168281	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_32154405_32154586_32154778_32155029_32155184_32155687_32155784_32155870_32155979_32157636_32157721_32157839_32157925_32162567_32162623_32164578_32164658_32166137_32166621_32166700_32166811_32166909_32167006_32167086_32167258_32167349_32167430_32167502_32167657_32167909
H1_mix_00076139	chr6	+	285	2	FSM	ENSG00000225914.4	ENST00000646176.1	3203	2	0	2918	0	-2918	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCTCCCAGTCAGTATAC	16	True	NA	NA	False	NA	NA	NA	32255327	32262809	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_32255415_32262611
H1_mix_00076140	chr6	+	270	1	FSM	ENSG00000237285.1	ENST00000432375.1	960	1	926	-236	926	236	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAAGGGTTTTAATGTAG	NA	False	NA	NA	False	NA	NA	NA	32326144	32326414	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_32326100_32326400
H1_mix_00076145	chr6	+	4737	11	FSM	ENSG00000204256.14	ENST00000679099.1	4737	11	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	172.800925923445	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTAAGGGCCCTGTTTT	145	False	NA	NA	False	NA	NA	NA	32971081	32981040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_32971198_32971594_32972928_32974461_32974766_32975383_32976465_32976561_32976937_32977441_32977571_32977756_32978006_32978125_32978389_32979827_32980133_32980341_32980465_32980581
H1_mix_00076147	chr6	+	1091	3	FSM	ENSG00000224557.8	ENST00000686632.1	1092	3	0	1	0	0	multi-exon	FALSE	canonical	3	27	junction_1	59	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGTGATAGTAAAATTTTC	3	True	NA	6	True	AATAAA	-16	NA	33116655	33119148	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33116742_33116973_33117221_33118390
H1_mix_00076148	chr6	+	1998	1	Intergenic	novelGene_1269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTTTTTTAATCTTT	NA	False	NA	24	True	AAGAAA	-26	NA	33139225	33141223	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_33139200_33141200
H1_mix_00076149	chr6	+	631	3	FSM	ENSG00000237649.8	ENST00000494554.2	631	3	0	0	0	0	multi-exon	FALSE	canonical	3	451	junction_2	6	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAAAAGGTGA	NA	False	NA	NA	False	TTTAAA	-36	NA	33406220	33407090	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33406487_33406591_33406666_33406799
H1_mix_00076150	chr6	+	836	7	FSM	ENSG00000112511.18	ENST00000428274.5	836	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	30.5745900308664	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGACCAAGGCAGACTCT	-13	True	NA	NA	False	NA	NA	NA	33410750	33413831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33410888_33412247_33412423_33412507_33412590_33412697_33412794_33413195_33413297_33413408_33413558_33413735
H1_mix_00076152	chr6	+	1554	5	NIC	ENSG00000197283.18	novel	5604	17	NA	NA	775	169	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	13.235841491949	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATTACAATGTCATTTA	725	False	NA	NA	False	NA	NA	NA	33442485	33447935	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_33442495_33442888_33443961_33444443_33444618_33446580_33446787_33447842
H1_mix_00076153	chr6	+	1853	6	NNC	ENSG00000137309.20	novel	1920	6	NA	NA	0	41737	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	8019.98117204772	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCTTCCTGTTTCTTTCT	-1	True	NA	NA	False	AATAAA	-14	NA	34237203	34287968	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_34237318_34240736_34240916_34242711_34242796_34243467_34243519_34244830_34246231_34287943
H1_mix_00076154	chr6	+	7065	1	FSM	ENSG00000225339.4	ENST00000429998.3	7065	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAGCAAAAAAAAAAAAAAAA	9884	False	NA	NA	False	NA	NA	NA	34279703	34286768	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_34279700_34286800
H1_mix_00076157	chr6	+	2588	13	NIC	ENSG00000065029.15	novel	1373	10	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	55.3947325012847	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGGTCCCTCCATCCT	-11	True	NA	5	True	AATAAA	-14	NA	35259518	35295983	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_35259728_35281055_35281225_35286127_35286209_35286321_35286400_35287645_35287846_35290265_35290383_35290640_35290717_35291277_35291404_35291557_35291738_35292553_35292788_35292880_35293045_35294455_35294570_35295143
H1_mix_00076158	chr6	+	2758	14	NIC	ENSG00000065029.15	novel	1373	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	62.9136724211422	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGGTCCCTCCATCCT	-3	True	NA	5	True	AATAAA	-14	NA	35259526	35295983	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_35259728_35281055_35281225_35286127_35286209_35286321_35286400_35287645_35287846_35290252_35290383_35290640_35290717_35291277_35291404_35291557_35291738_35292553_35292788_35292880_35293045_35293750_35293916_35294455_35294570_35295143
H1_mix_00076162	chr6	+	1382	5	NNC	ENSG00000023892.11	novel	2296	11	NA	NA	1052	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.7278356643601	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTGGCTCAGGTCTGTCC	180	False	NA	NA	False	AATAAA	-19	NA	35318659	35321771	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_35319000_35319523_35319691_35319818_35320018_35320883_35320975_35321186
H1_mix_00076163	chr6	+	3524	7	FSM	ENSG00000112033.14	ENST00000448077.6	3516	7	-17	9	-17	4	multi-exon	FALSE	canonical	1	4	junction_2	36.975968171533	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGGAAGCTGACTCAGT	-18	True	NA	19	True	AATAAA	-23	NA	35342540	35428182	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_35342682_35347066_35347151_35420126_35420282_35421819_35421959_35423945_35424149_35424328_35424780_35425831
H1_mix_00076164	chr6	+	1142	6	FSM	ENSG00000198755.11	ENST00000478340.2	962	6	-185	5	-166	0	multi-exon	FALSE	canonical	3	869	junction_3	4868.42590577283	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTGTCTGCCTGTGATT	NA	False	NA	21	True	AATAAA	-15	NA	35468234	35470780	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_35468440_35468798_35468874_35468946_35469286_35469380_35469530_35470178_35470352_35470579
H1_mix_00076165	chr6	+	651	5	FSM	ENSG00000198755.11	ENST00000490335.4	632	5	-19	0	0	0	multi-exon	FALSE	canonical	3	9217	junction_1	1886.69106837871	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCACCTGGCTGTCAAC	-3	True	NA	-38	True	NA	NA	NA	35468400	35470640	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_35468440_35468798_35469028_35469380_35469530_35470178_35470352_35470579
H1_mix_00076167	chr6	+	992	3	FSM	ENSG00000196748.10	ENST00000403376.4	426	3	-566	0	-562	0	multi-exon	FALSE	canonical	3	11	junction_1	4	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCCTCTGTCTGTACTT	NA	False	NA	3	True	ATTAAA	-14	NA	35776031	35779552	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_35776703_35777458_35777582_35779354
H1_mix_00076168	chr6	+	1094	3	FSM	ENSG00000196748.10	ENST00000481904.5	532	3	-562	0	-562	0	multi-exon	FALSE	canonical	2	5	junction_1	7	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCCTCTGTCTGTACTT	NA	False	NA	3	True	ATTAAA	-14	NA	35776031	35779552	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_35776805_35777458_35777582_35779354
H1_mix_00076169	chr6	+	2549	11	NIC	ENSG00000156711.17	novel	6316	12	NA	NA	-105	844	intron_retention	FALSE	canonical	3	75	junction_4	9.36162379077476	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGTGGACATGAATTCCA	140	False	NA	31	True	AATAAA	-17	NA	36130378	36140051	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_36131401_36132620_36132680_36135752_36135862_36136018_36136049_36136483_36136532_36136655_36136771_36136878_36136951_36138364_36138445_36138701_36138781_36138878_36139056_36139293
H1_mix_00076172	chr6	+	567	2	FSM	ENSG00000096070.19	ENST00000532538.1	567	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAATGAGCCTTTGCAAC	745	False	NA	NA	False	NA	NA	NA	36211200	36214066	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_36211561_36213859
H1_mix_00076173	chr6	+	578	4	FSM	ENSG00000112078.14	ENST00000483557.5	578	4	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_1	81.7978538159094	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCATTCCCAAGCACCAG	-27	True	NA	NA	False	NA	NA	NA	36443006	36474957	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_36443112_36465600_36465699_36470051_36470258_36474788
H1_mix_00076175	chr6	+	1628	4	FSM	ENSG00000112078.14	ENST00000474988.5	1618	4	-10	0	0	0	multi-exon	TRUE	canonical	1	3	junction_1	86.5139680437019	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTCATAAGAGTGCCAG	-27	True	NA	NA	False	NA	NA	NA	36443006	36488096	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_36443112_36481561_36481760_36484713_36484825_36486882
H1_mix_00076176	chr6	+	1095	7	FSM	ENSG00000112081.17	ENST00000477442.6	1095	7	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	1856.61149678655	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTATGTACAGAAAATTCAA	24	False	NA	NA	False	NA	NA	NA	36594390	36602040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_36594482_36596760_36596969_36598848_36598984_36599820_36600277_36601151_36601191_36601707_36601795_36601961
H1_mix_00076178	chr6	+	2267	3	FSM	ENSG00000124762.14	ENST00000405375.5	2267	3	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_1	58	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTACTATTGTGGTTAT	-1	True	NA	23	True	AATAAA	-24	NA	36678709	36687337	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_36678940_36684096_36684547_36685750
H1_mix_00076179	chr6	+	3267	12	NIC	ENSG00000065491.8	novel	3462	13	NA	NA	11	-4	combination_of_known_splicesites	FALSE	canonical	3	6	junction_3	34.0026736916646	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATCTGCTGGTTTTTCTC	9	False	NA	23	True	AATAAA	-16	NA	37257782	37332966	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_37257974_37269593_37269651_37279303_37279612_37282881_37282953_37284335_37284465_37287006_37287073_37291242_37291358_37312917_37313025_37313815_37313892_37316702_37316831_37317110_37317207_37331043
H1_mix_00076183	chr6	+	1083	2	FSM	ENSG00000220586.2	ENST00000405234.1	1099	2	0	16	0	-16	multi-exon	FALSE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTATTGTCAACATGGTCA	NA	False	NA	NA	False	NA	NA	NA	39992814	40000217	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_39993172_39999491
H1_mix_00076184	chr6	+	1145	2	FSM	ENSG00000204091.8	ENST00000373170.2	1165	2	21	-1	21	1	multi-exon	FALSE	canonical	1	1	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCTTGGGCTGATTG	17	False	NA	5	True	AATAAA	-16	NA	40378357	40379886	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_40378898_40379281
H1_mix_00076185	chr6	+	6080	9	Fusion	ENSG00000161912.18_ENSG00000001167.15	novel	1660	9	NA	NA	2	-13	intron_retention	FALSE	canonical	3	26	junction_5	28.3096714922657	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCTAACAATAACGTATCT	23	False	NA	8	True	AATAAA	-8	NA	41072984	41102390	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr6_+_41073085_41079028_41079165_41084045_41084193_41089578_41089711_41090203_41090310_41091545_41091695_41092911_41093086_41094395_41094498_41097356
H1_mix_00076186	chr6	+	3959	18	NNC	ENSG00000137166.17	novel	5910	17	NA	NA	29	658	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_16	32.4766618360607	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGGCCCTGTGTGTGTCAC	82	False	NA	19	True	ATTAAA	-14	NA	41546676	41600621	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_41546868_41565744_41565965_41577985_41578082_41584768_41584892_41585430_41585518_41587008_41587157_41587301_41587513_41587792_41587898_41588643_41588732_41589770_41589855_41589998_41590171_41590270_41590348_41591220_41591323_41594869_41594992_41597175_41597243_41597780_41597951_41598593_41598657_41598788
H1_mix_00076187	chr6	+	395	2	FSM	ENSG00000137166.17	ENST00000670130.1	532	2	137	0	137	0	multi-exon	FALSE	canonical	3	13	junction_1	0	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAACGGACAGCCTACTGT	66	False	NA	NA	False	NA	NA	NA	41586931	41587471	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_41587157_41587301
H1_mix_00076188	chr6	+	1035	5	FSM	ENSG00000278224.7	ENST00000394260.2	1035	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	2.8613807855649	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCGCAGCTCAGAGAGGGG	3058	False	NA	NA	False	NA	NA	NA	41784118	41787129	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_41784239_41784934_41785073_41785336_41785541_41786127_41786333_41786761
H1_mix_00076190	chr6	+	556	2	FSM	ENSG00000112578.10	ENST00000494032.1	572	2	0	16	0	-16	multi-exon	FALSE	canonical	3	170	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGCCCTGGAGTTGCTAG	9	False	NA	NA	False	AAAACA	-37	NA	41921529	41927628	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_41921831_41927373
H1_mix_00076191	chr6	+	667	3	FSM	ENSG00000112578.10	ENST00000475702.1	670	3	-20	23	0	-23	multi-exon	FALSE	canonical	3	170	junction_1	14.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTGCCTTTTGCCTGC	9	False	NA	NA	False	GGGGCT	-19	NA	41921529	41930334	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_41921831_41927373_41927537_41930131
H1_mix_00076193	chr6	+	413	4	ISM	ENSG00000137413.17	ENST00000372978.7	794	5	0	1755	0	11	5prime_fragment	FALSE	canonical	3	90	junction_3	9.03081145609604	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTTAGCAATTTTTCAAT	NA	False	NA	NA	False	NA	NA	NA	42050512	42056034	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_42050587_42051356_42051514_42055530_42055630_42055951
H1_mix_00076195	chr6	+	7866	47	NNC	ENSG00000024048.11	novel	7891	47	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_32	28.9089568867466	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGGTTAGCATATATCT	41	False	NA	6	True	AATAAA	-21	NA	42564050	42693505	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_42564398_42573733_42573994_42592150_42592230_42594190_42594305_42603587_42603719_42605720_42605860_42606588_42606652_42612170_42612292_42615070_42615179_42616001_42616091_42617408_42617508_42632551_42632716_42632804_42632905_42635417_42635547_42637010_42637195_42640208_42640271_42641581_42641693_42642415_42642482_42644213_42644337_42644472_42644537_42645465_42645591_42648117_42648171_42650283_42650387_42652022_42652072_42652490_42652646_42655620_42655724_42658023_42658134_42658239_42658321_42658645_42658825_42659655_42659856_42662183_42662278_42663257_42663420_42665411_42665513_42666166_42666246_42670091_42670241_42670659_42670716_42673790_42673888_42674125_42674194_42676055_42676192_42676782_42676874_42678538_42678670_42679723_42679833_42683054_42683112_42684793_42684872_42688215_42688387_42689568_42689671_42691031
H1_mix_00076196	chr6	+	864	2	NNC	ENSG00000112624.13	novel	6510	15	NA	NA	1187	-86466	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	0	289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCCCGGCCCGGCGCGGGG	18	False	NA	NA	False	NA	NA	NA	42748144	42781924	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_42748923_42781838
H1_mix_00076203	chr6	+	7901	35	Fusion	ENSG00000112655.16_ENSG00000137171.15	novel	4222	20	NA	NA	-101	0	multi-exon	TRUE	canonical	3	77	junction_7	421.348190429073	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTGTTTCTGAGATTCA	182	False	NA	12	True	AATAAA	-14	NA	43059529	43161712	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr6_+_43059686_43061310_43061594_43062916_43063148_43065619_43065702_43066305_43066526_43066995_43067084_43070353_43070456_43070691_43070866_43071274_43071375_43071566_43071620_43071851_43071923_43072146_43072256_43072823_43072965_43073222_43073339_43073901_43073966_43074621_43076568_43128976_43129265_43129726_43129830_43130229_43130421_43130510_43130662_43132015_43132165_43132420_43132688_43138848_43138983_43139135_43139272_43139405_43139526_43141667_43141818_43141930_43142082_43142171_43142300_43143416_43143621_43144450_43144607_43145199_43145433_43146617_43146699_43158816_43158969_43159787_43159967_43160720
H1_mix_00076204	chr6	+	2590	16	FSM	ENSG00000137171.15	ENST00000479388.5	2602	16	12	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	26.3814749819305	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCTGTGACTTGAGTCC	252	False	NA	8	True	AATAAA	-13	NA	43059894	43075089	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43060183_43061310_43061594_43062916_43063148_43065619_43065702_43066305_43066526_43066995_43067084_43070353_43070456_43070691_43070866_43071274_43071375_43071566_43071620_43071851_43071923_43072146_43072256_43072823_43072965_43073222_43073339_43073901_43073966_43074621
H1_mix_00076205	chr6	+	2977	16	NIC	ENSG00000137171.15	novel	2770	17	NA	NA	36	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	23.504514932715	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCTGTGACTTGAGTCC	12	True	NA	8	True	AATAAA	-13	NA	43059930	43075089	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_43060606_43061310_43061594_43062916_43063148_43065619_43065702_43066305_43066526_43066995_43067084_43070353_43070456_43070691_43070866_43071274_43071375_43071566_43071620_43071851_43071923_43072146_43072256_43072823_43072965_43073222_43073339_43073901_43073966_43074621
H1_mix_00076208	chr6	+	2412	7	FSM	ENSG00000112655.16	ENST00000471863.5	2412	7	0	0	0	0	multi-exon	FALSE	canonical	3	804	junction_5	42.6279120869049	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACATACAAACTATTTTG	32	True	NA	NA	False	AATAAA	-27	NA	43076338	43133721	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43076568_43128976_43129265_43129726_43129830_43130229_43130421_43130510_43130662_43132015_43132165_43132420
H1_mix_00076210	chr6	+	542	2	FSM	ENSG00000112659.14	ENST00000510282.1	1414	2	32	840	32	-840	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCAGGTTCTGGGAGG	7	False	NA	NA	False	NA	NA	NA	43186959	43188118	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43187096_43187712
H1_mix_00076211	chr6	+	677	3	FSM	ENSG00000112659.14	ENST00000512408.2	677	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	2.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCCCACCAGCTCCCC	NA	False	NA	NA	False	NA	NA	NA	43204155	43205115	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43204540_43204747_43204858_43204932
H1_mix_00076212	chr6	+	571	3	FSM	ENSG00000112659.14	ENST00000505172.5	571	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCAGGTGTGCTGCGGCT	NA	False	NA	NA	False	NA	NA	NA	43206353	43213705	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43206511_43213148_43213295_43213437
H1_mix_00076213	chr6	+	741	4	FSM	ENSG00000112659.14	ENST00000513904.1	938	4	197	0	197	0	multi-exon	FALSE	canonical	3	19	junction_2	2.35702260395516	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATGTCCTCTCTTGCATC	NA	False	NA	NA	False	NA	NA	NA	43212965	43215160	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43213295_43213437_43213568_43213712_43213913_43215078
H1_mix_00076215	chr6	+	4969	22	NIC	ENSG00000124574.15	novel	5043	22	NA	NA	7	0	combination_of_known_junctions	TRUE	canonical	3	20	junction_1	18.9130963995719	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTGAGGTCTCCTCTGT	-5	True	NA	16	True	ATTAAA	-20	NA	43427554	43450425	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_43427700_43427967_43428140_43432141_43433361_43434620_43434849_43435750_43435908_43436137_43436248_43437933_43438014_43438623_43438796_43441861_43441961_43442969_43443160_43443932_43444011_43444158_43444354_43444787_43444939_43445124_43445315_43445598_43445943_43446276_43446447_43447247_43447409_43447683_43447938_43448880_43449027_43449106_43449205_43449421_43449535_43449928
H1_mix_00076220	chr6	+	2549	9	NIC	ENSG00000137221.14	novel	2720	10	NA	NA	25	0	intron_retention	FALSE	canonical	3	12	junction_2	55.8680085111327	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCCTAACTTGTCTTAAT	19	True	NA	14	True	AATAAA	-15	NA	43477597	43506553	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_43477629_43497880_43497978_43498922_43499101_43500743_43500773_43501525_43501688_43502282_43502350_43503400_43503509_43503622_43503707_43504760
H1_mix_00076221	chr6	+	988	6	FSM	ENSG00000171453.20	ENST00000488601.6	973	6	-15	0	0	0	multi-exon	FALSE	canonical	3	323	junction_1	17.0880074906351	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGGGAGGCAGCTGAGG	-13	True	NA	NA	False	NA	NA	NA	43517082	43520703	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43517179_43517305_43517378_43519332_43519441_43519705_43520186_43520274_43520428_43520624
H1_mix_00076223	chr6	+	1915	6	FSM	ENSG00000172426.16	ENST00000372165.8	2586	6	-22	693	-12	-693	multi-exon	FALSE	canonical	1	1	junction_2	5.31413210223457	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTGGAGGGAGAACAAAGA	-10	True	NA	NA	False	NA	NA	NA	43645023	43671906	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43645326_43650374_43650541_43655606_43655692_43656576_43656724_43666423_43666521_43670788
H1_mix_00076226	chr6	+	2725	4	FSM	ENSG00000181577.16	ENST00000439969.2	2757	4	32	0	17	0	multi-exon	FALSE	canonical	2	2	junction_1	3.77123616632825	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCACGCTTTGATGAAT	44	False	NA	NA	False	NA	NA	NA	44000648	44005108	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_44000701_44000973_44001144_44002052_44002128_44002680
H1_mix_00076227	chr6	+	2694	18	NIC	ENSG00000137216.19	novel	2465	16	NA	NA	7	-3	combination_of_known_splicesites	TRUE	canonical	1	1	junction_1	55.1068794806054	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCAGGTGTCTGACTTG	12	False	NA	11	True	AATAAA	-16	NA	44138819	44155516	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_44138932_44139707_44139760_44140251_44140361_44141027_44141099_44146846_44146928_44147376_44147501_44148251_44148386_44148512_44148651_44148791_44148946_44149858_44149966_44150223_44150311_44150563_44150630_44151845_44152009_44152592_44152699_44153675_44153844_44154072_44154189_44154364_44154446_44154691
H1_mix_00076234	chr6	+	2159	12	FSM	ENSG00000112759.19	ENST00000371708.1	2159	12	0	0	0	0	multi-exon	FALSE	canonical	3	1945	junction_11	178.174211340409	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCATGGCTCCCTGTGTCC	103	False	NA	78	True	AATAAA	-17	NA	44227138	44234141	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
H1_mix_00076236	chr6	+	2735	9	NNC	ENSG00000153291.16	novel	2926	9	NA	NA	18	-6	intron_retention	FALSE	canonical	2	3	junction_1	9.44639481495454	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGAACAATTGATTTAGCT	11	True	NA	26	True	AGTAAA	-34	NA	46652992	46678184	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_46653299_46655842_46656035_46658961_46659047_46662375_46662499_46664773_46664887_46668708_46668794_46670134_46670228_46671125_46671229_46676549
H1_mix_00076237	chr6	+	2925	7	NIC	ENSG00000153291.16	novel	2926	9	NA	NA	-503	-23	intron_retention	FALSE	canonical	3	20	junction_1	2.5603819159562	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCATCCAACCTGGACCGT	130	False	NA	9	True	AGTAAA	-17	NA	46658159	46678167	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_46659047_46662375_46662499_46664773_46664887_46668708_46668794_46670134_46670228_46671125_46671229_46676646
H1_mix_00076238	chr6	+	769	2	FSM	ENSG00000198087.7	ENST00000486693.1	548	2	-204	-17	-204	17	multi-exon	FALSE	canonical	3	407	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAGAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	47607667	47609530	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_47608029_47609122
H1_mix_00076239	chr6	+	2036	9	NNC	ENSG00000031691.7	novel	1741	9	NA	NA	-10	265	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	68.2802130928134	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTATTACAAAATGTCTTA	19	False	NA	NA	False	AATAAA	-39	NA	49463359	49493372	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_49463456_49470140_49470279_49470973_49471029_49472062_49472184_49472789_49472859_49480950_49481081_49488351_49488472_49488606_49488685_49492143
H1_mix_00076240	chr6	+	736	5	NNC	ENSG00000197261.12	novel	628	3	NA	NA	-105	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	15.5463018110418	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACATTTTTATTTTTCTTT	NA	False	NA	8	True	AATAAA	-22	NA	49550560	49560934	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_49550609_49552464_49552571_49554876_49554974_49555073_49555158_49560533
H1_mix_00076243	chr6	+	650	2	FSM	ENSG00000197261.12	ENST00000526429.1	650	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTTTATTAAAAGAAACAG	981	False	NA	NA	False	GATAAA	-37	NA	49552352	49555308	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_49552571_49554876
H1_mix_00076244	chr6	+	2112	9	FSM	ENSG00000096093.16	ENST00000637263.1	2089	9	-23	0	0	0	multi-exon	FALSE	canonical	3	62	junction_4	10.2225241501304	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGTCATGTGTATT	3	True	NA	4	True	CATAAA	-16	NA	52420290	52480139	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_52420474_52423945_52424168_52438303_52438592_52452687_52452838_52454094_52454288_52464894_52465116_52469332_52469474_52479036_52479251_52479639
H1_mix_00076245	chr6	+	1703	9	FSM	ENSG00000096093.16	ENST00000636398.1	1703	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	28.2444684849972	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACAGGGTTCCTGAAGTT	NA	False	NA	10	True	AATACA	-23	NA	52438351	52492421	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_52438592_52452687_52452838_52454061_52454288_52464894_52465116_52469332_52469474_52479036_52479251_52479639_52479788_52490139_52490351_52492269
H1_mix_00076246	chr6	+	1636	7	FSM	ENSG00000096093.16	ENST00000636616.1	1636	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	31.7144376515737	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCTAATAGGATCTAAGAT	NA	False	NA	-6	True	ACTAAA	-4	NA	52453755	52492493	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_52454288_52464894_52465116_52469332_52469474_52479091_52479251_52479639_52479788_52490139_52490351_52492269
H1_mix_00076254	chr6	+	247	1	FSM	ENSG00000271367.1	ENST00000605281.1	548	1	-16	317	-16	-317	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAAGGACTTCTTGGGCC	1248	False	NA	NA	False	NA	NA	NA	53350141	53350388	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_53350100_53350400
H1_mix_00076255	chr6	+	1656	5	FSM	ENSG00000137269.15	ENST00000370882.1	808	5	0	-848	0	848	multi-exon	FALSE	canonical	3	4	junction_4	62.1309101816479	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACTGATTCTTATTAGGT	-5	True	NA	NA	False	AATAAA	-21	NA	53795089	53884993	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_53795416_53842109_53842228_53878992_53879072_53882886_53882977_53883950
H1_mix_00076256	chr6	+	6250	5	FSM	ENSG00000168143.9	ENST00000306858.8	6244	5	-6	0	-6	0	multi-exon	FALSE	canonical	2	10	junction_3	0.707106781186548	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGTAAGCTATTGTTT	6	True	NA	NA	False	AATAAA	-32	NA	54846764	54945099	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_54846827_54870186_54870691_54926370_54926536_54927507_54927633_54939705
H1_mix_00076257	chr6	+	5004	14	FSM	ENSG00000112200.17	ENST00000357489.7	4998	14	-6	0	-6	0	multi-exon	FALSE	canonical	3	14	junction_10	92.1278376037257	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTTGACTTTAATTTAG	NA	False	NA	15	True	ATTAAA	-17	NA	57090023	57170201	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_57090275_57090810_57090895_57099060_57099142_57124733_57124860_57128728_57128841_57133041_57133193_57134743_57134871_57141301_57141456_57141947_57142096_57147089_57148694_57152220_57152352_57153860_57154048_57161083_57161153_57168422
H1_mix_00076258	chr6	+	1237	4	FSM	ENSG00000112200.17	ENST00000370710.10	375	4	-173	-689	4	-490	multi-exon	FALSE	canonical	2	8	junction_3	184.575789913581	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACAGCAGGCCAGCATAG	-6	True	NA	NA	False	NA	NA	NA	57090033	57100299	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_57090275_57090810_57090895_57099060_57099142_57099468
H1_mix_00076261	chr6	+	7092	5	Intergenic	novelGene_1276	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	7	junction_4	34.6482322781408	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAATAAACATTATAAAGTT	-19	True	NA	-18	True	NA	NA	NA	62797349	62902159	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_62797516_62823708_62823785_62887209_62887340_62894107_62894220_62895551
H1_mix_00076262	chr6	+	4797	6	FSM	ENSG00000285976.2	ENST00000673217.1	4498	6	-147	-152	-70	1	multi-exon	FALSE	canonical	3	5	junction_1	277.71611404454	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGATTTTATTTTCAGG	77	False	NA	6	True	AATAAA	-18	NA	63572401	63583588	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_63572818_63576435_63576986_63578436_63578530_63578897_63579029_63579256_63579332_63580056
H1_mix_00076263	chr6	+	2808	6	FSM	ENSG00000118482.12	ENST00000481385.6	2787	6	-21	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	35.0108554594143	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAGAAAGTTGAAAA	-18	True	NA	13	True	NA	NA	NA	63635801	63698245	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_63636151_63679999_63680162_63684128_63685912_63691736_63692044_63694580_63694765_63698222
H1_mix_00076264	chr6	+	3718	12	FSM	ENSG00000118482.12	ENST00000506783.5	3700	12	-18	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	36.8974455430631	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAAAAGCATCAGGA	-18	True	NA	NA	False	NA	NA	NA	63635801	63709214	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_63636151_63684128_63685912_63691736_63692044_63694580_63694765_63698222_63698368_63698448_63698606_63700349_63700467_63702507_63702640_63703535_63703672_63706028_63706225_63706728_63706877_63709150
H1_mix_00076265	chr6	+	3097	14	FSM	ENSG00000118482.12	ENST00000515594.5	3074	14	-23	0	0	0	multi-exon	FALSE	canonical	1	9	junction_2	43.7078791320839	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAAAAGACAGCTTCAGG	-18	True	NA	NA	False	AGTAAA	-9	NA	63635801	63712363	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_63636151_63679999_63680162_63691736_63692044_63694580_63694765_63698222_63698368_63698448_63698606_63700349_63700467_63702507_63702640_63703535_63703672_63706028_63706225_63706728_63706877_63709150_63709241_63711166_63711363_63711585
H1_mix_00076267	chr6	+	6215	22	FSM	ENSG00000082269.17	ENST00000418814.7	6215	22	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_10	37.9479294754526	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGTAATCCTTTGCTTA	12	True	NA	26	True	AATAAA	-34	NA	70413507	70561174	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_70413703_70415290_70415377_70426438_70426533_70428303_70428420_70452491_70452572_70475409_70475550_70475662_70475734_70477158_70477333_70480900_70481028_70482000_70482155_70491033_70491084_70502635_70502792_70522512_70522587_70523966_70524122_70524342_70526699_70528291_70528453_70533159_70533252_70533756_70533855_70536259_70536412_70538290_70538402_70556749_70556864_70559715
H1_mix_00076268	chr6	+	4885	18	NIC	ENSG00000082269.17	novel	5198	21	NA	NA	719	126	intron_retention	FALSE	canonical	3	50	junction_12	39.1409483895121	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATCAACATGTCTTTCTA	800	False	NA	NA	False	AATAAA	-15	NA	70427246	70538472	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_70428420_70452491_70452572_70475409_70475550_70475662_70475734_70477158_70477333_70480900_70481028_70482000_70482155_70486166_70486245_70491033_70491084_70502635_70502792_70522512_70522587_70523966_70524122_70524930_70526699_70528291_70528453_70533159_70533252_70533756_70533855_70536259_70536412_70538290
H1_mix_00076270	chr6	+	3214	11	FSM	ENSG00000112305.15	ENST00000370455.8	3214	11	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_5	114.619544581193	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACTTTAAAATCCTGGTG	-14	True	NA	2	True	AATAAA	-10	NA	70667882	70862003	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_70668142_70732377_70732512_70754979_70755066_70773349_70773426_70791688_70791770_70798656_70798738_70836940_70837029_70852539_70852665_70856858_70857031_70857921_70858230_70860199
H1_mix_00076271	chr6	+	295	1	FSM	ENSG00000218014.1	ENST00000405746.1	1186	1	391	500	391	-500	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCAGTGGGGAGGTGGATT	454	False	NA	NA	False	NA	NA	NA	71585111	71585406	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_71585100_71585400
H1_mix_00076272	chr6	+	1429	1	FSM	ENSG00000239626.1	ENST00000439695.1	860	1	130	-699	130	699	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCGGGGTACGACTTAAC	NA	False	NA	NA	False	TTTAAA	-40	NA	73290532	73291961	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_73290500_73292000
H1_mix_00076273	chr6	+	1316	1	FSM	ENSG00000234882.1	ENST00000433978.1	1316	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAACATAAGGAAAAGATT	17	False	NA	NA	False	NA	NA	NA	73291961	73293277	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_73292000_73293300
H1_mix_00076274	chr6	+	3610	11	FSM	ENSG00000135297.17	ENST00000681204.1	3616	11	6	0	0	0	multi-exon	FALSE	canonical	3	13	junction_10	59.4309683582558	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCAAGCCTGTAGTCCCA	-11	True	NA	NA	False	ACTAAA	-26	NA	73461736	73502309	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_73462072_73466208_73466409_73466488_73466607_73473364_73473655_73479731_73479845_73479935_73480127_73480674_73480806_73482039_73482245_73482448_73482621_73492233_73492353_73500573
H1_mix_00076275	chr6	+	4141	12	FSM	ENSG00000135297.17	ENST00000680570.1	4147	12	6	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	72.1882296213709	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAGACTGTTTCAAAAAA	-11	True	NA	NA	False	NA	NA	NA	73461736	73502427	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_73462072_73466208_73466409_73466488_73466607_73473364_73473655_73479731_73479845_73479935_73480368_73480674_73480806_73482028_73482245_73482448_73482621_73492233_73492353_73497735_73497897_73500573
H1_mix_00076280	chr6	+	2933	2	FSM	ENSG00000270362.2	ENST00000604516.2	2965	2	19	13	19	-13	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTACGATGAAATTGAAGC	13	False	NA	-9	True	AATAAA	-3	NA	79233717	79236784	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_79233928_79234061
H1_mix_00076281	chr6	+	658	3	NNC	ENSG00000287811.2	novel	1422	2	NA	NA	5	1962	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	1	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGTTATTTTTTGACT	9	True	NA	4	True	AATACA	-15	NA	79537592	79541938	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_79537713_79538727_79538844_79541516
H1_mix_00076284	chr6	+	1773	1	FSM	ENSG00000272129.1	ENST00000606629.1	1436	1	-355	18	-355	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTCTTCATCTCAAACT	NA	False	NA	-7	True	AATAAA	-9	NA	80355068	80356841	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_80355100_80356800
H1_mix_00076287	chr6	+	828	6	ISM	ENSG00000083097.15	ENST00000349129.7	7957	39	45581	45391	-9611	-5848	internal_fragment	FALSE	canonical	3	15	junction_1	6.85273667960473	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTATTACTAATAATAACTG	NA	False	NA	NA	False	AATGAA	-16	NA	83113251	83123080	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_83113422_83118887_83118988_83119747_83119858_83120682_83120792_83121929_83122051_83122862
H1_mix_00076288	chr6	+	5473	21	FSM	ENSG00000083097.15	ENST00000484282.1	5473	21	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_19	12.6153676125589	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATGCGTCATTCATATTA	NA	False	NA	NA	False	AATAAA	-15	NA	83137675	83171350	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_83139163_83139999_83140112_83140220_83140404_83141920_83142047_83145523_83145659_83147235_83147292_83148758_83148864_83151592_83151660_83151882_83152028_83152287_83152368_83153510_83153621_83153893_83154044_83154179_83154242_83155950_83156104_83157181_83157319_83158566_83158623_83159795_83159961_83162789_83162920_83167861_83168757_83169477_83169535_83170288
H1_mix_00076289	chr6	+	490	4	FSM	ENSG00000203877.9	ENST00000369689.6	570	4	80	0	80	0	multi-exon	FALSE	canonical	2	4	junction_1	5.55777733351102	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTGGTATTTGGCCTT	210	False	NA	NA	False	AATAAA	-17	NA	83853439	83857515	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_83853512_83853694_83853774_83854096_83854162_83857241
H1_mix_00076290	chr6	+	977	3	FSM	ENSG00000135318.12	ENST00000369646.7	974	3	-8	5	0	-5	multi-exon	FALSE	canonical	3	5	junction_2	2	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAACATTACTAAGAATTT	8	True	NA	NA	False	ATTAAA	-21	NA	85450082	85471594	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_85450479_85467059_85467283_85471236
H1_mix_00076291	chr6	+	756	3	FSM	ENSG00000111850.11	ENST00000608525.5	735	3	-21	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	121.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTATAATGTACTTCATA	-13	True	NA	30	True	AATAAA	-42	NA	87322587	87341778	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_87322633_87337008_87337167_87341225
H1_mix_00076292	chr6	+	2110	3	FSM	ENSG00000203872.7	ENST00000608326.1	2110	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATTGATTCCCCAGCCT	2650	False	NA	1	True	AATAAA	-15	NA	87347501	87365462	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_87348907_87356300_87356504_87364960
H1_mix_00076293	chr6	+	645	2	FSM	ENSG00000203872.7	ENST00000369574.2	718	2	73	0	73	0	multi-exon	FALSE	canonical	3	9	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGATTTTATTCTGCCAGA	NA	False	NA	NA	False	AATACA	-36	NA	87356216	87365318	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_87356504_87364960
H1_mix_00076296	chr6	+	1300	7	FSM	ENSG00000118412.13	ENST00000419040.6	1280	7	-20	0	-14	0	multi-exon	FALSE	canonical	3	56	junction_1	27.9702222610642	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAGAAGAAAGAAAAGTT	-13	True	NA	NA	False	TATAAA	-24	NA	89829879	89862793	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_89830068_89846561_89846645_89853165_89853235_89854816_89854918_89855469_89855545_89857083_89857200_89862125
H1_mix_00076297	chr6	+	6681	10	NIC	ENSG00000118412.13	novel	6719	10	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	2	20	junction_9	36.587793957366	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTATTTTGATTCGAAT	38	False	NA	12	True	AATAAA	-15	NA	89829930	89874429	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_89830068_89846561_89846645_89853165_89853235_89854816_89854918_89855469_89855545_89857083_89857200_89862125_89864372_89865952_89869083_89871288_89871389_89873805
H1_mix_00076298	chr6	+	1302	8	FSM	ENSG00000118412.13	ENST00000548224.2	1300	8	-2	0	0	0	multi-exon	FALSE	canonical	2	14	junction_6	48.6792919976016	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGATTCGAATGTTTC	-1	True	NA	17	True	AATAAA	-20	NA	89829938	89874434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_89830068_89846561_89846645_89853165_89853235_89854816_89854918_89855469_89855545_89857083_89857200_89871288_89871389_89873805
H1_mix_00076299	chr6	+	1348	1	Intergenic	novelGene_1291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGGAAGTTCTTGTGTG	NA	False	NA	NA	False	NA	NA	NA	90672381	90673729	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_90672400_90673700
H1_mix_00076300	chr6	+	248	2	Intergenic	novelGene_1294	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGCTATACATTTCTCTC	NA	False	NA	NA	False	NA	NA	NA	93830315	93835751	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_93830446_93835633
H1_mix_00076301	chr6	+	376	2	Antisense	novelGene_ENSG00000289178.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGCGATGGCTTGGCTTG	NA	False	NA	NA	False	NA	NA	NA	94553955	94559573	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr6_+_94554127_94559368
H1_mix_00076302	chr6	+	3397	3	FSM	ENSG00000172461.11	ENST00000302103.6	12793	3	-18	9414	-18	-9414	multi-exon	FALSE	canonical	2	12	junction_2	1	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGCTGCAAACTTTGTC	2	True	NA	NA	False	AAAAAG	-39	NA	96015955	96206198	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_96016213_96114038_96114128_96203147
H1_mix_00076303	chr6	+	456	2	FSM	ENSG00000014123.10	ENST00000461673.1	458	2	0	2	0	-2	multi-exon	FALSE	canonical	2	3	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTACTCTGAAAGGTTTT	NA	False	NA	25	True	AATAAA	-22	NA	96521594	96522962	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_96521951_96522862
H1_mix_00076305	chr6	+	396	1	FSM	ENSG00000271042.1	ENST00000603824.1	313	1	24	-107	24	107	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAAGAAAAGAAG	NA	False	NA	NA	False	TTTAAA	-8	NA	99082472	99082868	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_99082500_99082900
H1_mix_00076307	chr6	+	1356	7	FSM	ENSG00000164418.22	ENST00000683747.1	1857	7	-20	521	18	-521	multi-exon	FALSE	canonical	1	1	junction_4	1.10554159678513	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGAATACCCACTTAAAG	20	False	NA	NA	False	NA	NA	NA	101393725	101686353	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_101393838_101398984_101399393_101621948_101622117_101626379_101626638_101676622_101676805_101682552_101682607_101686179
H1_mix_00076309	chr6	+	434	4	FSM	ENSG00000130348.11	ENST00000467262.1	413	4	-21	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	110.780062385892	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACAATTTCAGCACTT	3	True	NA	NA	False	NA	NA	NA	106629577	106640862	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_106629706_106640100_106640207_106640348_106640509_106640822
H1_mix_00076311	chr6	+	468	1	Intergenic	novelGene_1302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTACCTTTATGACCTAA	NA	False	NA	12	True	AATAAA	-23	NA	107041515	107041983	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_107041500_107042000
H1_mix_00076312	chr6	+	290	1	FSM	ENSG00000232778.1	ENST00000434149.1	455	1	94	71	94	-71	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTGTATGTTCAACTGGC	NA	False	NA	NA	False	NA	NA	NA	107931893	107932183	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_107931900_107932200
H1_mix_00076313	chr6	+	2131	3	NNC	ENSG00000286511.1	novel	2167	2	NA	NA	-18830	20	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	6	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTAAAAGGTCTCCTCCA	13	False	NA	14	True	AATAAA	-20	NA	108780098	108837133	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_108780161_108782187_108782352_108835228
H1_mix_00076314	chr6	+	819	8	FSM	ENSG00000183137.15	ENST00000524064.5	819	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	45.7905613658981	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTAAACATTTAGAAGAAAA	-6	True	NA	NA	False	NA	NA	NA	109095495	109155235	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_109095576_109100191_109100287_109106034_109106091_109145218_109145382_109146757_109146938_109150117_109150240_109153832_109153950_109155229
H1_mix_00076316	chr6	+	1673	11	FSM	ENSG00000183137.15	ENST00000368968.6	1649	11	-24	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	33.8586768790513	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTCTTATTGATTGAAG	-6	True	NA	NA	False	AATAAA	-15	NA	109095495	109163163	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_109095576_109145218_109145382_109146757_109146938_109150117_109150240_109153832_109153950_109155229_109155308_109155790_109155878_109159024_109159103_109159268_109159463_109160571_109160731_109162748
H1_mix_00076317	chr6	+	12914	11	FSM	ENSG00000183137.15	ENST00000517392.6	12903	11	-11	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	25.4654668129214	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACTGTGTATATTTTGTT	-6	True	NA	NA	False	CATAAA	-18	NA	109095495	109174418	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_109095576_109145218_109145382_109146757_109146938_109150117_109150240_109153832_109153950_109155229_109155308_109155790_109155878_109159024_109159103_109159268_109159463_109160571_109160717_109162748
H1_mix_00076321	chr6	+	6025	22	FSM	ENSG00000112367.12	ENST00000674532.1	6030	22	5	0	5	0	multi-exon	FALSE	canonical	3	188	junction_6	20.7063476853626	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTCACTTGCAAATTC	-20	True	NA	23	True	ATTAAA	-29	NA	109691270	109825375	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109738454_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109796764_109796852_109825087
H1_mix_00076323	chr6	+	2950	22	FSM	ENSG00000112367.12	ENST00000675726.1	2966	22	16	0	0	0	multi-exon	FALSE	canonical	3	8	junction_21	50.575643264421	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAGATGACTAGATAAT	-26	True	NA	-13	True	NA	NA	NA	109691264	109825407	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109825087
H1_mix_00076324	chr6	+	1516	9	FSM	ENSG00000112367.12	ENST00000676435.1	1387	9	0	-129	0	129	multi-exon	FALSE	canonical	3	188	junction_7	22.2542130842679	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTTCTTTTATTTTGCT	5	True	NA	NA	False	TTTAAA	-11	NA	109691295	109743609	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109
H1_mix_00076326	chr6	+	2135	15	FSM	ENSG00000112367.12	ENST00000675681.1	2187	15	-16	68	0	-68	multi-exon	FALSE	canonical	3	188	junction_7	22.0546630730398	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTAATTCCTTGGCTTCT	5	True	NA	NA	False	NA	NA	NA	109691295	109767140	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728
H1_mix_00076330	chr6	+	3031	21	FSM	ENSG00000112367.12	ENST00000676021.1	3015	21	-16	0	0	0	multi-exon	FALSE	canonical	1	4	junction_14	68.0766296169251	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTTAACTTTGTATTTT	5	True	NA	NA	False	NA	NA	NA	109691295	109825705	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109_109743273_109743674_109743773_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109784969_109785029_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109796764_109796852_109825087
H1_mix_00076333	chr6	+	3355	15	FSM	ENSG00000168438.15	ENST00000606893.5	3372	15	17	0	17	0	multi-exon	FALSE	canonical	1	1	junction_1	41.4362677580195	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTATTGACTTTCTATT	17	True	NA	NA	False	TATAAA	-18	NA	110180157	110230333	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_110180181_110180383_110180634_110193181_110193269_110201557_110201688_110207505_110207590_110209083_110209224_110210706_110212273_110213085_110213161_110215285_110215332_110217701_110217804_110219363_110219480_110219735_110219870_110226166_110226244_110228831_110228977_110229953
H1_mix_00076334	chr6	+	3925	16	FSM	ENSG00000168438.15	ENST00000368932.5	3933	16	17	-9	17	0	multi-exon	FALSE	canonical	1	1	junction_1	40.0407570136008	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCATCTTGTTCATCTTT	17	True	NA	29	True	AATAAA	-29	NA	110180157	110232232	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_110180181_110180383_110180634_110193181_110193269_110201557_110201688_110207505_110207590_110209083_110209224_110210706_110210804_110212132_110212273_110213085_110213161_110215285_110215332_110217701_110217804_110219363_110219480_110219735_110219870_110226166_110226244_110228831_110228977_110229953
H1_mix_00076335	chr6	+	3136	6	FSM	ENSG00000123505.19	ENST00000451850.6	3121	6	-15	0	-15	0	multi-exon	FALSE	canonical	3	79	junction_1	279.246414480115	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTGTTGCCCTGTTTT	438	False	NA	28	True	AATAAA	-29	NA	110874754	110895713	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_110875216_110892160_110892204_110892298_110892444_110892734_110892828_110892909_110893066_110893475
H1_mix_00076336	chr6	+	869	9	FSM	ENSG00000197498.13	ENST00000368864.8	873	9	4	0	4	0	multi-exon	FALSE	canonical	1	1	junction_2	310.196686595779	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATAACTTAGAGCTTGG	0	True	NA	12	True	TATAAA	-31	NA	110982018	111024327	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_110982130_110985005_110985139_110988987_110989066_110991746_110991787_110997182_110997265_110999710_110999788_111008037_111008138_111015753_111015857_111024182
H1_mix_00076339	chr6	+	5425	2	NNC	ENSG00000228624.8	novel	786	6	NA	NA	-3137	-28693	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGTCAGCAAAGGGAGAT	NA	False	NA	NA	False	NA	NA	NA	114422474	114427941	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_114427215_114427256
H1_mix_00076342	chr6	+	8107	4	NNC	ENSG00000228624.8	novel	786	6	NA	NA	-5893	-28683	at_least_one_novel_splicesite	TRUE	canonical	2	766	junction_3	270.658456361518	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGGAGATAAGGGTGGGG	NA	False	NA	NA	False	AAAAAG	-10	NA	114419718	114427951	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_114427047_114427088_114427173_114427214_114427257_114427298
H1_mix_00076344	chr6	+	843	2	FSM	ENSG00000228624.8	ENST00000517965.1	850	2	7	0	7	0	multi-exon	FALSE	canonical	3	86	junction_1	0	17179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTGTGCAGCCTGTTCT	NA	False	NA	NA	False	NA	NA	NA	114448966	114456634	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_114449032_114455856
H1_mix_00076345	chr6	+	2710	2	ISM	ENSG00000228624.8	ENST00000522697.1	786	6	42005	845	18657	-845	internal_fragment	FALSE	canonical	3	16	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGTATGATTTGGGGA	NA	False	NA	NA	False	ATTAAA	-41	NA	114467616	114470860	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_114468612_114469145
H1_mix_00076347	chr6	+	7473	7	FSM	ENSG00000111817.19	ENST00000331677.7	7237	7	-236	0	-236	0	multi-exon	FALSE	canonical	1	1	junction_1	51.9764904120657	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGACTTTTCTTCTTGCA	251	False	NA	3	True	AATAAA	-17	NA	116370121	116441261	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_116370497_116370869_116371122_116399197_116399667_116426573_116426828_116430953_116431194_116433342_116433551_116435586
H1_mix_00076348	chr6	+	615	4	FSM	ENSG00000111832.13	ENST00000517800.5	446	4	-169	0	-69	0	multi-exon	FALSE	canonical	3	28	junction_2	334.306579188757	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTTTAAAATTACTAGCA	NA	False	NA	NA	False	NA	NA	NA	116571339	116584831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_116571656_116572857_116572986_116580294_116580361_116584726
H1_mix_00076350	chr6	+	3641	6	FSM	ENSG00000111834.13	ENST00000229554.10	2840	6	0	-801	0	801	multi-exon	FALSE	canonical	2	3	junction_4	2.33238075793812	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAATGTCTGTACTTACCT	-22	True	NA	NA	False	AATAAA	-15	NA	116616478	116633786	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_116617310_116622767_116623003_116627628_116628370_116629566_116629703_116630434_116630553_116632206
H1_mix_00076351	chr6	+	3674	14	NIC	ENSG00000164465.19	novel	3614	15	NA	NA	-117	-3	combination_of_known_junctions	FALSE	canonical	3	5	junction_11	26.8942703033179	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGCCCCTGACTCTCAC	NA	False	NA	13	True	AATAAA	-13	NA	117482522	117549794	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_117482894_117503766_117503980_117519815_117519951_117521524_117521577_117525361_117525435_117532259_117532394_117537184_117537226_117538619_117538836_117539254_117539380_117540667_117540816_117540917_117541026_117544527_117544578_117545477_117545598_117547906
H1_mix_00076355	chr6	+	596	1	FSM	ENSG00000217330.1	ENST00000402595.1	565	1	102	-133	102	133	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGTTGAGCGTCATTTT	NA	False	NA	NA	False	NA	NA	NA	118589171	118589767	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_118589200_118589800
H1_mix_00076358	chr6	+	1800	5	NIC	ENSG00000135549.15	novel	464	5	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_3	165.994540572875	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAAGTCTCCTTCATTTT	NA	False	NA	19	True	AATAAA	-31	NA	122482060	122726372	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_122482267_122585920_122586008_122633282_122633368_122717786_122717964_122725127
H1_mix_00076359	chr6	+	1445	7	NNC	ENSG00000135549.15	novel	464	5	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	194.972362713853	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTCTGTGTATGTGTG	NA	False	NA	17	True	ATTAAA	-23	NA	122482076	122725892	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_122482267_122509451_122509526_122585920_122586008_122633282_122633368_122675077_122675145_122717786_122717964_122725127
H1_mix_00076360	chr6	+	1432	7	NIC	ENSG00000135549.15	novel	464	5	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	186.463058599344	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTCTGTGTATGTGTG	NA	False	NA	17	True	ATTAAA	-23	NA	122482076	122725892	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_122482267_122585492_122585554_122585920_122586008_122633282_122633368_122675077_122675145_122717786_122717964_122725127
H1_mix_00076361	chr6	+	1811	4	FSM	ENSG00000135549.15	ENST00000392490.5	1811	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	199.882187522773	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAAGTCTCCTTCATTTT	2	True	NA	19	True	AATAAA	-31	NA	122610231	122726372	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_122610536_122633282_122633368_122717786_122717964_122725127
H1_mix_00076362	chr6	+	1775	7	FSM	ENSG00000172594.13	ENST00000539041.5	1755	7	-20	0	-20	0	multi-exon	FALSE	canonical	2	12	junction_1	6	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGATGAAGTTTTCTT	226	False	NA	7	True	AATAAA	-18	NA	122789028	122809717	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_122789459_122796823_122796969_122801309_122801407_122803663_122803834_122804908_122805090_122806232_122806358_122809090
H1_mix_00076363	chr6	+	11433	6	FSM	ENSG00000146373.17	ENST00000521654.7	11433	6	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	6.38748776906852	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTCTTTTTTTCCAAT	-3	True	NA	18	True	AATAAA	-19	NA	124962436	125092633	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_124963427_125045210_125045445_125057941_125058107_125076656_125076859_125081435_125081508_125082863
H1_mix_00076365	chr6	+	6211	1	NIC	ENSG00000224506.3	novel	1188	4	NA	NA	187	-12268	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATGTGGTTGTGATATT	NA	False	NA	NA	False	AAAACA	-23	NA	125701665	125707876	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_125701700_125707900
H1_mix_00076366	chr6	+	5443	17	FSM	ENSG00000111912.20	ENST00000368357.7	5521	17	78	0	78	0	multi-exon	FALSE	canonical	2	3	junction_2	7.99780243254358	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTTTCCCAAAGATTCA	39	False	NA	14	True	AATAAA	-21	NA	125781238	125931111	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_125781372_125786136_125786214_125815290_125815405_125855019_125855241_125874888_125874969_125878262_125878371_125881089_125881204_125882425_125882552_125885158_125885344_125888938_125889982_125890641_125890811_125915332_125915481_125920942_125921069_125922681_125922835_125927662_125927759_125928173_125928248_125928635
H1_mix_00076370	chr6	+	1889	13	FSM	ENSG00000066651.20	ENST00000368332.7	1889	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	95.9903062235395	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCATATCTAGTTGTC	20	True	NA	19	True	AATAAA	-22	NA	125986478	126039276	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_125986623_125993756_125993823_125995966_125996041_125998052_125998135_125998222_125998316_125998549_125998685_125999456_125999614_126008391_126008473_126011252_126011418_126012770_126012853_126012969_126013102_126021159_126021266_126038704
H1_mix_00076372	chr6	+	2324	5	NIC	ENSG00000118518.17	novel	2169	5	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	47.2175814713121	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGTCTCTTGTTTGAG	13	False	NA	29	True	AATAAA	-20	NA	127266897	127288362	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_127267096_127280230_127280341_127285207_127285349_127286049_127286178_127286615
H1_mix_00076375	chr6	+	7551	2	Genic_Genomic	ENSG00000289262.1	novel	1354	1	NA	NA	-61	49503	multi-exon	TRUE	canonical	0	0	junction_1	0	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGGGGTGAAAGGAGGAAA	NA	False	NA	NA	False	NA	NA	NA	131294355	131345273	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr6_+_131300600_131343966
H1_mix_00076380	chr6	+	602	3	FSM	ENSG00000236673.5	ENST00000421310.5	601	3	-1	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	68	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATAAATAATTCCTGTGTT	27	False	NA	NA	False	NA	NA	NA	131901962	131907530	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_131902152_131903946_131904235_131907405
H1_mix_00076382	chr6	+	3142	2	FSM	ENSG00000236166.1	ENST00000440246.1	490	2	-45	-2607	-45	2554	multi-exon	FALSE	canonical	3	14	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTCCTCCTCCTCTCCCT	NA	False	NA	NA	False	NA	NA	NA	132090487	132101833	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_132090727_132098930
H1_mix_00076383	chr6	+	1400	6	FSM	ENSG00000028839.10	ENST00000367871.5	808	6	-26	-566	-26	566	multi-exon	FALSE	canonical	3	578	junction_2	54.2785408794304	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATATATATATAT	5	True	NA	NA	False	NA	NA	NA	133953168	133985289	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_133953426_133980081_133980261_133982567_133982651_133982816_133982881_133984375_133984480_133984576
H1_mix_00076385	chr6	+	257	3	FSM	ENSG00000234084.1	ENST00000444302.1	577	3	68	252	68	-252	multi-exon	FALSE	canonical	1	1	junction_2	0.5	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTCCCTTTCTTAGAAT	NA	False	NA	NA	False	AATGAA	-41	NA	135301635	135306906	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_135301691_135305033_135305164_135306834
H1_mix_00076388	chr6	+	1707	10	FSM	ENSG00000112357.14	ENST00000678557.1	1707	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	29.4584872173675	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTATTGATCATTTATCA	311	False	NA	15	True	AATAAA	-2	NA	136822897	136913909	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_136823380_136825213_136825272_136826318_136826470_136845614_136845693_136846072_136846182_136866626_136866734_136869889_136870004_136872197_136872254_136898141_136898242_136913457
H1_mix_00076389	chr6	+	1881	2	FSM	ENSG00000182747.5	ENST00000331858.5	2343	2	398	64	398	-64	multi-exon	FALSE	canonical	2	2	junction_1	0	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTTAAATTTGTCAAAAT	398	False	NA	-35	True	AAAAAG	-34	NA	136922698	136925596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_136922868_136923884
H1_mix_00076390	chr6	+	1331	7	ISM	ENSG00000118503.16	ENST00000237289.8	4432	9	-185	4787	0	0	5prime_fragment	FALSE	canonical	2	11	junction_1	2.03442593595562	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGGGGAGGAGAGAGGG	-1	True	NA	NA	False	AAGAAA	-16	NA	137867258	137878525	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_137867495_137871212_137871523_137874844_137875036_137875687_137875836_137875995_137876167_137877075_137877257_137878431
H1_mix_00076391	chr6	+	939	3	Intergenic	novelGene_1320	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_1	31.5	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTCACACAAAGCCTGTT	NA	False	NA	NA	False	AATAAA	-9	NA	142016031	142021733	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_142016266_142018068_142018356_142021315
H1_mix_00076394	chr6	+	3065	6	FSM	ENSG00000146416.19	ENST00000646199.1	3064	6	-1	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	102.104652195676	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCACCCTGAACCTGAC	120	False	NA	-3	True	AATAAA	-4	NA	143060852	143340290	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_143061067_143136834_143136991_143165081_143165184_143284109_143284226_143333281_143333446_143337977
H1_mix_00076396	chr6	+	1528	7	NNC	ENSG00000146416.19	novel	1202	7	NA	NA	-128	-73	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_5	108.574731048353	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGAGTGTATTGCATCTC	34	False	NA	6	True	NA	NA	NA	143060724	143340217	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_143061067_143136834_143136991_143165081_143165184_143284109_143284226_143333281_143333446_143335050_143335120_143339638
H1_mix_00076397	chr6	+	2490	12	FSM	ENSG00000112419.15	ENST00000367584.8	2490	12	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	95.5008545675927	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTCGGTAGCTGAGAACT	-27	True	NA	22	True	CATAAA	-17	NA	143536844	143824164	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_143537208_143712015_143712184_143748984_143749066_143753753_143753913_143765260_143765799_143772257_143772458_143774058_143774216_143777327_143777384_143783218_143783281_143788772_143788911_143807056_143807134_143823673
H1_mix_00076398	chr6	+	2009	4	FSM	ENSG00000112419.15	ENST00000402863.3	825	4	-71	-1113	-17	-248	multi-exon	FALSE	canonical	3	284	junction_1	24.4994331000173	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACGCAAGTAGTGATGTT	-37	True	NA	NA	False	AATAAA	-26	NA	143677947	143755251	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_143678210_143712015_143712184_143748984_143749066_143753753
H1_mix_00076399	chr6	+	5750	25	NIC	ENSG00000152818.19	novel	753	7	NA	NA	-458	0	combination_of_known_junctions	TRUE	canonical	3	14	junction_1	26.3367284203807	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGACTTTGATATTCTTCA	26	False	NA	8	True	AATAAA	-17	NA	144659385	144853034	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_144660276_144678405_144678579_144700086_144700244_144730356_144730487_144748245_144748515_144751805_144751953_144754719_144754799_144757928_144757990_144771906_144771969_144774289_144774365_144781921_144782124_144789193_144789280_144793833_144793992_144797823_144797991_144803035_144803148_144820881_144821019_144827347_144827387_144827610_144827677_144828789_144828856_144835779_144835939_144836300_144836542_144839172_144839285_144840739_144840833_144846804_144846828_144850988
H1_mix_00076400	chr6	+	3817	8	NIC	ENSG00000152818.19	novel	12918	75	NA	NA	-9773	0	intron_retention	FALSE	canonical	3	119	junction_1	8.77380144730519	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGACTTTGATATTCTTCA	1961	False	NA	8	True	AATAAA	-17	NA	144826599	144853034	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_144827677_144828789_144828856_144835779_144835939_144836300_144836542_144839172_144839285_144840739_144840833_144846804_144846828_144850988
H1_mix_00076401	chr6	+	213	2	Intergenic	novelGene_1322	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	15	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCTTAACTGATGACATTC	85	False	NA	NA	False	NA	NA	NA	144923664	144928537	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_144923755_144928414
H1_mix_00076403	chr6	+	3185	5	NNC	ENSG00000164506.15	novel	2160	10	NA	NA	-847	-46581	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	15.0166574176812	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTCTCATGGAAAAAAACAAC	44	False	NA	NA	False	NA	NA	NA	147203569	147246804	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_147204683_147205970_147206069_147235249_147235332_147239169_147239271_147245013
H1_mix_00076404	chr6	+	3456	28	FSM	ENSG00000164506.15	ENST00000321680.11	9290	28	116	5718	0	0	multi-exon	FALSE	canonical	1	1	junction_21	10.7314135747061	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACCAGAATCCAATAAGTC	-25	True	NA	NA	False	AATACA	-27	NA	147204532	147384755	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_147204683_147205970_147206069_147235249_147235332_147239169_147239271_147260614_147260750_147262289_147262354_147267083_147267168_147278080_147278205_147291093_147291173_147310083_147310239_147311454_147311528_147313883_147314032_147314263_147314332_147314595_147314637_147315514_147315736_147316228_147316408_147324958_147325085_147327124_147327277_147334156_147334223_147339178_147339239_147339336_147339385_147353322_147353374_147359083_147359324_147363334_147363705_147364000_147364167_147373730_147373843_147382777_147382999_147384713
H1_mix_00076405	chr6	+	617	2	FSM	ENSG00000111961.19	ENST00000470750.1	617	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTGGGTCACAGGGTG	26	False	NA	NA	False	TATAAA	-28	NA	148440357	148469111	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_148440408_148468544
H1_mix_00076406	chr6	+	480	3	FSM	ENSG00000111962.8	ENST00000473631.1	485	3	0	5	0	-5	multi-exon	FALSE	canonical	3	12	junction_2	91.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAAGGTTAGTCCCTTCC	NA	False	NA	NA	False	AATAAA	-14	NA	148953906	149005583	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_148953952_148964409_148964564_149005302
H1_mix_00076411	chr6	+	7148	5	NNC	ENSG00000131016.17	novel	8466	5	NA	NA	-79	18870	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	166.22951001552	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATCTTAACTCACTGCAA	314	False	NA	NA	False	NA	NA	NA	151240294	151377429	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_151240725_151305746_151305904_151348710_151353753_151355726_151357197_151377380
H1_mix_00076414	chr6	+	5468	21	NIC	ENSG00000213079.10	novel	5127	20	NA	NA	-14	74624	intron_retention	TRUE	canonical	3	22	junction_20	31.812694007267	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGTGTTAGTCATTTA	-10	True	NA	11	True	AATAAA	-13	NA	154733401	154908868	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_154733931_154773988_154774073_154778000_154778046_154787860_154788023_154792822_154792977_154795008_154795140_154801970_154802148_154803543_154803624_154805368_154805487_154808069_154808202_154808685_154808799_154810014_154810209_154815715_154815817_154818478_154818593_154820176_154820334_154822275_154822410_154824233_154824379_154827171_154827241_154830921_154831141_154831938_154833410_154907729
H1_mix_00076428	chr6	+	5806	17	FSM	ENSG00000130340.17	ENST00000680464.1	5806	17	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_6	22.0949654899029	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATTCTCAAAGCACTTT	-10	True	NA	7	True	AATAAA	-21	NA	157823220	157944507	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_157823447_157867546_157867634_157873101_157873177_157875050_157875177_157896826_157896999_157901897_157902046_157906127_157906213_157909664_157909791_157909907_157910026_157921530_157921662_157927110_157927215_157928598_157928703_157932194_157932273_157935963_157936041_157937433_157937524_157938632_157940975_157942790
H1_mix_00076430	chr6	+	3101	7	FSM	ENSG00000130340.17	ENST00000681469.1	3103	7	2	0	2	0	multi-exon	FALSE	canonical	3	275	junction_4	14.233177204452	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTACAGTAAATTCTCAAAG	8298	False	NA	1	True	AATAAA	-15	NA	157927764	157944501	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_157928703_157932194_157932273_157935963_157936041_157937433_157937524_157938632_157938748_157940882_157940975_157942790
H1_mix_00076433	chr6	+	7182	8	NNC	ENSG00000146433.10	novel	5390	17	NA	NA	58954	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	29.7801467903894	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTATGTGTCTTGATTT	NA	False	NA	17	True	AATAAA	-13	NA	158619044	158635428	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_158622155_158623549_158623608_158625103_158625207_158625702_158625755_158628407_158628491_158629729_158629820_158631322_158631390_158631809
H1_mix_00076434	chr6	+	1726	6	ISM	ENSG00000146457.16	ENST00000614346.4	1623	7	122	-5	122	0	intron_retention	FALSE	canonical	3	110	junction_1	171.576921525012	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTTTTTTTTTTTTTTT	6	True	NA	18	True	ATTAAA	-20	NA	159727119	159749421	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_159727334_159736257_159736296_159738989_159739046_159742087_159742147_159743664_159743793_159748190
H1_mix_00076436	chr6	+	342	2	FSM	ENSG00000197081.16	ENST00000487607.2	355	2	0	13	0	-13	multi-exon	FALSE	canonical	3	308	junction_1	0	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTCAGTGGGGAGTT	NA	False	NA	NA	False	NA	NA	NA	160073415	160074044	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_160073470_160073756
H1_mix_00076454	chr6	+	3310	3	NNC	ENSG00000280707.3	novel	573	3	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_2	423	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGAGTTTGTTCTTTTTG	NA	False	NA	20	True	AATAAA	-15	NA	167228211	167237510	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_167228398_167231859_167231958_167234484
H1_mix_00076455	chr6	+	7552	3	Fusion	ENSG00000228648.1_ENSG00000280707.3	novel	573	3	NA	NA	8	7234	multi-exon	FALSE	canonical	3	137	junction_2	375.5	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACCCAGTCTCAGCTATT	14	True	NA	NA	False	ATTAAA	-15	NA	167228307	167253150	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr6_+_167228398_167231859_167231958_167245786
H1_mix_00076457	chr6	+	7909	32	NIC	ENSG00000130396.21	novel	7593	34	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_30	54.545096331558	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGTCAGGCAGTGGT	23	False	NA	29	True	ATTAAA	-17	NA	167826960	167972023	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_167827238_167864550_167864747_167870382_167870499_167872216_167872378_167875334_167875496_167880359_167880518_167889214_167889327_167890861_167891030_167896877_167896973_167898204_167898468_167902316_167902387_167907170_167907290_167911100_167911163_167911283_167911490_167914167_167914314_167914643_167914739_167915167_167915434_167917088_167917233_167918734_167918934_167922855_167922960_167925004_167925092_167943128_167943195_167943401_167943476_167943940_167944060_167946706_167946902_167947852_167947945_167948292_167948479_167951185_167952188_167962438_167962568_167965756_167966271_167969113_167969199_167969781
H1_mix_00076459	chr6	+	5581	19	NIC	ENSG00000130396.21	novel	7806	34	NA	NA	-178	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	61.4414556235104	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGTCAGGCAGTGGT	6169	False	NA	29	True	ATTAAA	-17	NA	167913362	167972023	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_167913424_167914167_167914314_167914643_167914739_167915167_167915434_167917088_167917233_167918734_167918934_167922855_167922960_167925004_167925092_167943128_167943195_167943401_167943476_167943940_167944060_167946706_167946902_167947852_167947945_167948292_167948479_167951185_167952188_167962438_167962568_167965756_167966046_167969113_167969199_167969781
H1_mix_00076460	chr6	+	5999	15	FSM	ENSG00000130396.21	ENST00000511637.5	5999	15	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_5	18.6264295438235	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTAGTTCCTGGCTCTC	6347	False	NA	NA	False	AATATA	-22	NA	167913540	167965029	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_167914314_167914643_167914739_167915167_167915434_167917088_167917233_167918734_167918934_167922855_167922960_167925004_167925092_167943128_167943195_167943401_167943476_167943940_167944060_167946706_167946902_167947852_167947945_167948292_167948479_167951185_167952188_167962432
H1_mix_00076464	chr6	+	1955	8	FSM	ENSG00000112592.15	ENST00000636632.1	1955	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	128.829265277097	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATAAATGCAGTTTATAAA	42	False	NA	-7	True	AATGAA	-41	NA	170556941	170572832	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_170557084_170561790_170562234_170564544_170564633_170566917_170567010_170567225_170567506_170569611_170569780_170571409_170571505_170572185
H1_mix_00076465	chr6	-	4479	29	NNC	ENSG00000112685.14	novel	4456	28	NA	NA	0	34165	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	112.662280914316	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTTTCAACAGCATAGAA	4	True	NA	NA	False	AAAAAG	-41	NA	693108	450988	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_451022_485132_486765_488978_489039_491124_491187_497366_497490_499644_499701_532468_532611_549174_549292_553853_553921_555226_555289_555953_556014_556483_556565_562783_562846_564032_564155_564544_564703_564863_564930_572519_572645_576756_576883_592468_592588_598020_598124_598859_598942_599079_599226_610097_610179_617710_617836_619429_619544_629834_629962_632940_633118_637700_637862_693018
H1_mix_00076466	chr6	-	4567	29	NIC	ENSG00000112685.14	novel	4456	28	NA	NA	0	68	combination_of_known_splicesites	FALSE	canonical	2	44	junction_27	132.149164907366	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAACACCCAAAATACTTAC	4	True	NA	46	True	NA	NA	NA	693108	485085	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_486765_488978_489039_491124_491187_497366_497490_499644_499701_532468_532611_549174_549292_553853_553921_555226_555289_555953_556014_556483_556565_562783_562846_564032_564155_564544_564703_564863_564930_572519_572645_576756_576883_592468_592588_598020_598124_598859_598942_599079_599226_610097_610179_617710_617836_619429_619544_629834_629962_632940_633118_637700_637862_689138_689213_693018
H1_mix_00076467	chr6	-	4194	29	NNC	ENSG00000112685.14	novel	4456	28	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	31	junction_1	107.783300171772	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGTTGTAATTTACTTG	5	True	NA	-22	True	AATAAA	-15	NA	693107	485153	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_486404_486633_486765_488978_489039_491124_491187_497366_497490_499644_499701_532468_532611_549174_549292_553853_553921_555226_555289_555953_556014_556483_556565_562783_562846_564032_564155_564544_564703_564863_564930_572519_572645_576756_576883_592468_592588_598020_598124_598859_598942_599079_599226_610097_610179_617710_617836_619429_619544_629834_629962_632940_633118_637700_637862_693018
H1_mix_00076471	chr6	-	1669	6	NNC	ENSG00000137267.7	novel	1616	4	NA	NA	0	140550	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	677.677386372011	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTGTTACATCTACGTAC	0	True	NA	NA	False	NA	NA	NA	3157543	3012946	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_3012974_3096550_3096578_3153665_3154924_3155624_3155736_3156043_3156153_3157406
H1_mix_00076472	chr6	-	447	1	FSM	ENSG00000271361.1	ENST00000604204.1	631	1	194	-10	194	10	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTGAACAGACTCCAAGG	1313	False	NA	NA	False	NA	NA	NA	3023578	3023131	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_3023100_3023600
H1_mix_00076474	chr6	-	1378	11	NNC	ENSG00000198721.13	novel	1451	11	NA	NA	0	21288	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	234.953697566137	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGCTATGTTGCCCAGG	-9	True	NA	NA	False	NA	NA	NA	4135573	4094404	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_4094431_4115709_4116030_4117307_4117452_4119185_4119276_4125249_4125371_4126134_4126238_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133702_4135510
H1_mix_00076475	chr6	-	1394	11	NNC	ENSG00000198721.13	novel	1368	10	NA	NA	0	21288	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	226.682178390803	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGCTATGTTGCCCAGG	-9	True	NA	NA	False	NA	NA	NA	4135573	4094404	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_4094430_4115702_4116030_4117307_4117452_4119185_4119276_4125249_4125371_4126134_4126238_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133712_4135510
H1_mix_00076476	chr6	-	1255	9	NIC	ENSG00000198721.13	novel	1380	10	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	101	junction_2	233.336633161191	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTAAGAATTCACACAGGT	2	True	NA	-18	True	AATAAA	-17	NA	4135562	4115705	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_4116030_4117307_4117452_4125249_4125371_4126134_4126238_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133702_4135510
H1_mix_00076477	chr6	-	1559	11	NNC	ENSG00000198721.13	novel	1380	10	NA	NA	2	0	at_least_one_novel_splicesite	TRUE	canonical	3	17	junction_10	272.53640123844	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTAAGAATTCACACAGGT	2	True	NA	-18	True	AATAAA	-17	NA	4135562	4115705	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_4116030_4117307_4117452_4119185_4119276_4125249_4125371_4126134_4126238_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133702_4134312_4134527_4135510
H1_mix_00076478	chr6	-	2122	9	FSM	ENSG00000198721.13	ENST00000464057.5	2122	9	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_8	136.707717412003	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTAAGAATTCACACAGGT	-11	True	NA	-18	True	AATAAA	-17	NA	4135575	4115705	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_4116030_4117307_4117452_4119185_4119276_4125249_4126238_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133702_4135510
H1_mix_00076479	chr6	-	3870	7	FSM	ENSG00000198721.13	ENST00000464583.5	3870	7	0	0	0	0	multi-exon	FALSE	canonical	3	641	junction_3	50.723925978444	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCTTAAGAATTCACACAG	1844	False	NA	-20	True	AATAAA	-15	NA	4133782	4115707	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_4116030_4117307_4119276_4125249_4126238_4127761_4127832_4130371_4130561_4130766_4130866_4133548
H1_mix_00076481	chr6	-	1188	1	FSM	ENSG00000220685.3	ENST00000405549.1	1188	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTAGACTGTCGTTTTTG	NA	False	NA	NA	False	TATAAA	-34	NA	5066982	5065794	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_5065800_5067000
H1_mix_00076482	chr6	-	564	5	FSM	ENSG00000124491.16	ENST00000431222.6	592	5	28	0	28	0	multi-exon	FALSE	canonical	1	1	junction_4	3.3166247903554	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAAGATTGTCATGAGAG	NA	False	NA	NA	False	NA	NA	NA	6320877	6266733	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_6266810_6305350_6305540_6318534_6318683_6320586_6320660_6320799
H1_mix_00076483	chr6	-	3261	9	NNC	ENSG00000124783.14	novel	3248	9	NA	NA	0	4493	intron_retention	FALSE	non_canonical	0	0	junction_1	248.045831198591	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAAAGAAAAAAGAA	-13	True	NA	NA	False	NA	NA	NA	7313199	7263812	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_7263840_7287569_7289932_7295391_7295486_7297922_7298002_7298746_7298824_7301309_7301573_7303549_7303638_7309916_7310030_7313041
H1_mix_00076484	chr6	-	3307	9	NNC	ENSG00000124783.14	novel	9661	8	NA	NA	0	496	intron_retention	FALSE	non_canonical	0	0	junction_1	248.045831198591	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGGCACTCTTGGGCTGT	-13	True	NA	NA	False	AATAAA	-20	NA	7313199	7280646	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_7280722_7287571_7289932_7295391_7295486_7297922_7298002_7298746_7298824_7301309_7301573_7303549_7303638_7309916_7310030_7313041
H1_mix_00076485	chr6	-	294	1	FSM	ENSG00000220472.1	ENST00000407940.1	730	1	66	370	66	-370	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGTCGCGGTTCATCAT	8001	False	NA	NA	False	NA	NA	NA	7339502	7339208	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_7339200_7339500
H1_mix_00076486	chr6	-	216	1	FSM	ENSG00000234115.2	ENST00000440581.1	1241	1	643	382	643	-382	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCATGATGACCAGCATGC	NA	False	NA	NA	False	NA	NA	NA	7517197	7516981	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_7517000_7517200
H1_mix_00076487	chr6	-	3817	4	NIC	ENSG00000188428.20	novel	2659	5	NA	NA	33	1254	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	131.423826691442	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CATAAATATAAAAATACATA	24	True	NA	NA	False	AATAAA	-17	NA	8064352	8012312	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_8015829_8041138_8041269_8062533_8062617_8064264
H1_mix_00076490	chr6	-	2137	11	FSM	ENSG00000124786.12	ENST00000379660.4	2137	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_10	28.4887697172061	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTTAATAGAATTTTG	15	True	NA	-1	True	AATAAA	-24	NA	8435483	8413067	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_8413700_8414907_8414978_8416883_8416996_8417401_8417495_8419579_8419678_8420720_8420829_8422469_8422625_8427936_8428059_8429863_8430158_8434384_8434431_8435076
H1_mix_00076492	chr6	-	2218	5	NNC	ENSG00000124786.12	novel	3566	11	NA	NA	0	-11939	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	49.2867882905754	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTTCTGAATTTATTTC	15	True	NA	NA	False	AATAAA	-17	NA	8435483	8425012	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_8426724_8427936_8428059_8429863_8430158_8434384_8434431_8435438
H1_mix_00076493	chr6	-	578	5	NNC	ENSG00000137434.12	novel	541	5	NA	NA	15	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	7.07106781186548	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTAATTGTGTCGTCTTTT	19	True	NA	-4	True	ATTAAA	-15	NA	10694594	10671423	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_10671599_10683186_10683233_10684848_10684924_10686965_10687147_10694493
H1_mix_00076494	chr6	-	557	2	FSM	ENSG00000111859.17	ENST00000505589.1	571	2	14	0	14	0	multi-exon	FALSE	canonical	3	31	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAGGAAAGGGATGGTGT	NA	False	NA	NA	False	NA	NA	NA	11192553	11190857	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_11191206_11192344
H1_mix_00076495	chr6	-	1991	3	FSM	ENSG00000111859.17	ENST00000379433.5	3341	3	0	1350	0	-1350	multi-exon	FALSE	canonical	1	1	junction_1	11.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9929	False	NA	NA	False	NA	NA	NA	11232658	11199657	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_11201047_11213280_11213728_11232503
H1_mix_00076496	chr6	-	2229	8	FSM	ENSG00000145979.18	ENST00000606214.5	2229	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	310.338722123069	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTACCCAGTCTCAGGTA	1610	False	NA	NA	False	ATTAAA	-15	NA	13326912	13266541	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_13267836_13305061_13305188_13306397_13306528_13307599_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786
H1_mix_00076497	chr6	-	462	4	FSM	ENSG00000215022.8	ENST00000612479.1	462	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0.942809041582063	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACGGCCACCAGGACGCT	7552	False	NA	NA	False	NA	NA	NA	13295311	13280959	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_13281157_13281428_13281554_13294795_13294899_13295274
H1_mix_00076498	chr6	-	3299	1	FSM	ENSG00000272379.1	ENST00000606393.1	473	1	-640	-2186	-640	2186	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTTGATTATTTGAACTG	NA	False	NA	NA	False	NA	NA	NA	13291130	13287831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_13287800_13291100
H1_mix_00076505	chr6	-	1877	6	FSM	ENSG00000145979.18	ENST00000607532.5	1877	6	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_5	242.202394703273	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTGAAGCTTTTACATAAA	-22	True	NA	NA	False	CATAAA	-8	NA	13328544	13306644	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326907_13328295
H1_mix_00076506	chr6	-	2792	5	NIC	ENSG00000145979.18	novel	693	5	NA	NA	5	2047	combination_of_known_splicesites	FALSE	canonical	3	37	junction_4	280.18955637211	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGCTTAAGTAAATATGT	-4	True	NA	NA	False	AATAAA	-20	NA	13328526	13314573	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_13316709_13320907_13321096_13325093_13325175_13326786_13326964_13328315
H1_mix_00076508	chr6	-	1755	14	NNC	ENSG00000010017.13	novel	3384	14	NA	NA	1000	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_13	24.568946580891	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGCATATAGTCAACATG	-6	True	NA	NA	False	NA	NA	NA	13710835	13622332	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_13622493_13625652_13625765_13632369_13632522_13634430_13634553_13637807_13637956_13639562_13639754_13641198_13641308_13642478_13642592_13644544_13644730_13652658_13652682_13657108_13657277_13658779_13658833_13696784_13696897_13710728
H1_mix_00076509	chr6	-	1264	10	NNC	ENSG00000050393.12	novel	1826	10	NA	NA	0	11768	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	149.548208503702	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGTAATAAAAAAGTTGAAG	-63	True	NA	NA	False	NA	NA	NA	13814568	13774788	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_13774817_13790791_13790865_13791877_13791993_13793893_13793948_13798832_13798905_13800340_13800383_13801287_13801390_13802242_13802347_13806924_13807045_13814014
H1_mix_00076510	chr6	-	1268	10	NNC	ENSG00000050393.12	novel	1826	10	NA	NA	0	11768	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	149.548208503702	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGTAATAAAAAAGTTGAAG	-63	True	NA	NA	False	NA	NA	NA	13814568	13774788	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_13774817_13790787_13790865_13791877_13791993_13793893_13793948_13798832_13798905_13800340_13800383_13801287_13801390_13802242_13802347_13806924_13807045_13814014
H1_mix_00076511	chr6	-	622	7	FSM	ENSG00000050393.12	ENST00000607303.1	622	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	217.822302704649	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCATGTCAGTATTGGCA	NA	False	NA	NA	False	NA	NA	NA	13801345	13787133	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_13787356_13788645_13788705_13791877_13791993_13793893_13793948_13798832_13798905_13800340_13800383_13801287
H1_mix_00076512	chr6	-	3152	2	FSM	ENSG00000226673.2	ENST00000427276.1	3152	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGTCGTGGTCATTCAT	NA	False	NA	-5	True	AATAAA	-19	NA	14285145	14280126	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_14283189_14285055
H1_mix_00076513	chr6	-	6048	2	NNC	ENSG00000226673.2	novel	3152	2	NA	NA	-12836	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGTCGTGGTCATTCAT	4187	False	NA	-5	True	AATAAA	-19	NA	14298290	14280126	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_14283189_14295304
H1_mix_00076515	chr6	-	2924	3	Intergenic	novelGene_1224	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTCGATGTCTGCTCA	12	False	NA	-133	True	TATAAA	-17	NA	14302465	14290687	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_14293297_14295304_14295384_14302229
H1_mix_00076516	chr6	-	1078	1	FSM	ENSG00000271888.1	ENST00000607711.1	1078	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTTATTATTTTTACC	3678	False	NA	-4	True	AATAAA	-20	NA	15245000	15243922	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_15243900_15245000
H1_mix_00076517	chr6	-	1413	10	FSM	ENSG00000047579.20	ENST00000510395.5	1404	10	0	-9	0	6	multi-exon	FALSE	canonical	1	13	junction_8	78.7781695649245	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGCACAGAGCTAGTTTGTA	11	True	NA	-6	True	AATAAA	-23	NA	15663007	15522800	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_15523220_15524525_15524670_15533239_15533396_15593058_15593082_15615266_15615400_15627342_15627476_15637743_15637805_15651312_15651409_15652086_15652141_15662813
H1_mix_00076520	chr6	-	2823	12	NNC	ENSG00000124795.17	novel	3142	11	NA	NA	0	15233	intron_retention	FALSE	non_canonical	0	0	junction_1	478.735541826868	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATATATATATATAT	22	True	NA	NA	False	NA	NA	NA	18264497	18208626	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_18208662_18224180_18225731_18226173_18226243_18236451_18236601_18237380_18237517_18249650_18249840_18255730_18255852_18256360_18256456_18257952_18258063_18258303_18258406_18263842_18263997_18264384
H1_mix_00076521	chr6	-	2844	12	NNC	ENSG00000124795.17	novel	3142	11	NA	NA	0	13517	intron_retention	FALSE	non_canonical	0	0	junction_1	478.735541826868	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAGAGAAAAAAAA	-5	True	NA	NA	False	AAAACA	-30	NA	18264524	18210342	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_18210372_18224180_18225731_18226173_18226243_18236451_18236601_18237380_18237517_18249650_18249840_18255730_18255852_18256360_18256456_18257952_18258063_18258303_18258406_18263842_18263997_18264384
H1_mix_00076522	chr6	-	2895	12	FSM	ENSG00000124795.17	ENST00000515770.2	2895	12	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	723.09404072744	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTATAAACCTTGTCAATAA	282	False	18264568	-61	True	ACTAAA	-40	NA	18264548	18224216	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_18225731_18226173_18226243_18236451_18236597_18237380_18237517_18244507_18244604_18249650_18249840_18255730_18255852_18256360_18256456_18257952_18258063_18258303_18258406_18263842_18263997_18264384
H1_mix_00076523	chr6	-	3093	10	FSM	ENSG00000124795.17	ENST00000507591.2	3093	10	0	0	0	0	multi-exon	FALSE	canonical	3	1455	junction_9	116.52372195299	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTAACAGGTATTTTCACA	-5	True	NA	76	True	TATAAA	-14	NA	18264524	18224345	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_18226243_18236451_18236601_18237380_18237517_18249650_18249840_18255730_18255852_18256360_18256456_18257952_18258063_18258303_18258406_18263842_18263997_18264384
H1_mix_00076524	chr6	-	4394	13	FSM	ENSG00000172197.11	ENST00000324607.8	4325	13	4	-73	4	73	multi-exon	FALSE	canonical	2	11	junction_8	6.52080005316321	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGGTTGCAAAAAGCAATA	-16	True	NA	74	True	NA	NA	NA	20212465	20099610	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_20102413_20109597_20109750_20112875_20113009_20115287_20115353_20118436_20118541_20124407_20124601_20126516_20126701_20128698_20128754_20131143_20131200_20144219_20144316_20151184_20151263_20152623_20152770_20212135
H1_mix_00076525	chr6	-	5709	25	FSM	ENSG00000112293.15	ENST00000230036.2	5790	25	81	0	74	0	multi-exon	FALSE	canonical	1	2	junction_12	2.65622957508487	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTTAGTGCTGCTTAACA	5831	False	NA	NA	False	AATAAA	-19	NA	24489497	24425831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_24429119_24433186_24433238_24433362_24433390_24436575_24436737_24437112_24437290_24445545_24445640_24445725_24445832_24446837_24446980_24447876_24448034_24448133_24448209_24449788_24449900_24454014_24454202_24456497_24456638_24460278_24460400_24462729_24462796_24466679_24466820_24466911_24466940_24467166_24467275_24472581_24472637_24473618_24473668_24475120_24475232_24476180_24476279_24479880_24479960_24486074_24486131_24489414
H1_mix_00076526	chr6	-	658	4	FSM	ENSG00000111913.20	ENST00000463828.1	803	4	145	0	145	0	multi-exon	FALSE	canonical	3	65	junction_3	2.62466929133727	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGGGACATGTTCTTTTG	NA	False	NA	NA	False	NA	NA	NA	24835905	24828138	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_24828296_24830508_24830671_24832255_24832392_24835702
H1_mix_00076527	chr6	-	2148	14	NIC	ENSG00000111913.20	novel	2442	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	31.8771681012264	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGCATCTCCAATTGAG	8	True	NA	NA	False	AATAAA	-21	NA	24935948	24839358	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_24839600_24842861_24843555_24848024_24848155_24849801_24849951_24850596_24850723_24852574_24852619_24860972_24861037_24865300_24865451_24869093_24869148_24870865_24870890_24872880_24872960_24873643_24873800_24875690_24875818_24935837
H1_mix_00076528	chr6	-	1327	1	FSM	ENSG00000220517.2	ENST00000402854.2	1237	1	-135	45	-135	-45	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGGAATATCATCGTCTG	NA	False	NA	NA	False	NA	NA	NA	25024618	25023291	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_25023300_25024600
H1_mix_00076530	chr6	-	605	1	FSM	ENSG00000286522.2	ENST00000621411.3	511	1	11	-105	11	105	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAACGGTTTGGTCAGTC	1528	False	NA	NA	False	NA	NA	NA	26032088	26031483	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_26031500_26032100
H1_mix_00076531	chr6	-	385	1	FSM	ENSG00000277157.2	ENST00000614247.2	403	1	42	-24	42	24	mono-exon	FALSE	NA	NA	NA	NA	NA	3595	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTGCTAAAAGTGTAGTT	9944	False	NA	NA	False	NA	NA	NA	26189070	26188685	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_26188700_26189100
H1_mix_00076532	chr6	-	338	1	FSM	ENSG00000196866.3	ENST00000341023.2	510	1	-32	204	-32	-204	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCATCCGCAACGACGAG	5672	False	NA	NA	False	NA	NA	NA	26199325	26198987	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_26199000_26199300
H1_mix_00076533	chr6	-	512	1	FSM	ENSG00000124575.7	ENST00000244534.7	776	1	227	37	227	-37	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAAAATTTTAAACGGCT	6002	False	NA	-37	True	AAAAAG	-23	NA	26234760	26234248	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_26234200_26234800
H1_mix_00076535	chr6	-	4779	5	NNC	ENSG00000181315.11	novel	4882	5	NA	NA	0	7085	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	62.7071566888501	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAAAGACCTAGTATC	61	False	NA	NA	False	AAAAAG	-4	NA	26659685	26627297	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_26627328_26634383_26638729_26643658_26643729_26658557_26658647_26659440
H1_mix_00076536	chr6	-	922	3	Genic_Genomic	ENSG00000287966.1	novel	1346	1	NA	NA	601	34649	multi-exon	FALSE	canonical	1	2	junction_2	10.5	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAGTATTTGTCCATACC	619	False	NA	NA	False	NA	NA	NA	27019679	26984285	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr6_-_26984798_26992350_26992609_27019527
H1_mix_00076538	chr6	-	1665	1	FSM	ENSG00000220581.1	ENST00000403778.1	876	1	-84	-705	-84	705	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATCTAAATTGT	NA	False	NA	NA	False	NA	NA	NA	27034394	27032729	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_27032700_27034400
H1_mix_00076539	chr6	-	490	1	FSM	ENSG00000185130.6	ENST00000377401.4	451	1	0	-39	0	39	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGGGCGAGGGGTCATAA	-3	True	NA	-50	True	NA	NA	NA	27807929	27807439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_27807400_27807900
H1_mix_00076540	chr6	-	1267	2	Genic_Genomic	ENSG00000273542.2	novel	387	1	NA	NA	0	2629	multi-exon	FALSE	canonical	2	5	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAACTTTTGAGGATTTA	14	True	NA	NA	False	NA	NA	NA	27831560	27828544	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr6_-_27829319_27831067
H1_mix_00076541	chr6	-	420	1	FSM	ENSG00000184357.5	ENST00000331442.5	797	1	158	219	158	-219	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAAGAAGGCCAAGGCCGC	6102	False	NA	NA	False	AAAAAG	-13	NA	27867430	27867010	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_27867000_27867400
H1_mix_00076542	chr6	-	210	1	FSM	ENSG00000275126.2	ENST00000618305.2	387	1	51	126	51	-126	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACAGTCACAGCCATGGA	49	False	NA	NA	False	NA	NA	NA	27873483	27873273	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_27873300_27873500
H1_mix_00076544	chr6	-	487	1	FSM	ENSG00000278677.2	ENST00000359611.4	487	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTTCTACGGAAGAACTG	1	True	NA	1	True	TTTAAA	-44	NA	27893185	27892698	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_27892700_27893200
H1_mix_00076545	chr6	-	583	3	NNC	ENSG00000269293.4	novel	2163	3	NA	NA	6	-472	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	32.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACACAAAGCCTGTTGGTG	5	True	NA	-6	True	AATAAA	-13	NA	28136828	28122269	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_28122641_28123083_28123212_28136744
H1_mix_00076546	chr6	-	1280	1	FSM	ENSG00000273712.1	ENST00000615674.1	271	1	-883	-126	-883	126	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTTATTAGTTATTTGC	NA	False	NA	NA	False	NA	NA	NA	28316766	28315486	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_28315500_28316800
H1_mix_00076547	chr6	-	3909	6	FSM	ENSG00000158691.15	ENST00000396827.3	3909	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	12.4354332453679	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGTAACTTGCTTATTC	41	False	NA	NA	False	AATAAA	-14	NA	28399731	28379218	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_28380872_28382190_28382610_28390595_28391743_28392901_28393047_28398003_28398474_28399656
H1_mix_00076548	chr6	-	5691	6	NNC	ENSG00000187987.10	novel	3150	4	NA	NA	3	10356	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	6.43117407632541	132	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTGTTCTATTTGAAG	-14	True	NA	-2	True	GATAAA	-19	NA	28443499	28421573	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_28423841_28424342_28426406_28434451_28435079_28435459_28435608_28435858_28436344_28443398
H1_mix_00076549	chr6	-	7006	6	FSM	ENSG00000204713.11	ENST00000481474.5	7006	6	0	0	0	0	multi-exon	TRUE	canonical	3	517	junction_2	17.6816288842403	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTTGTTGCTTTCTGGG	4	True	NA	-7	True	AATAAA	-18	NA	28923913	28903001	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_28908841_28908972_28909089_28911695_28911719_28920011_28920243_28921891_28921988_28923212
H1_mix_00076551	chr6	-	4194	5	NIC	ENSG00000197935.7	novel	2782	7	NA	NA	-276	0	intron_retention	FALSE	canonical	3	14	junction_2	3.49106001094224	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTGTGTTCTAGGCACT	11	True	NA	-25	True	AATAAA	-13	NA	29005592	28994787	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_28996587_28998733_28998839_28999486_29000048_29003512_29003595_29003945
H1_mix_00076553	chr6	-	3386	20	NIC	ENSG00000204681.11	novel	4525	23	NA	NA	48	-282	intron_retention	FALSE	canonical	2	5	junction_18	34.3924716364375	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCGACCGGCTTAGCTGT	4104	False	NA	NA	False	NA	NA	NA	29632337	29603595	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_29603717_29604493_29604638_29604859_29604989_29605568_29605697_29606390_29606485_29606896_29607005_29607101_29607219_29608600_29608734_29610923_29611002_29612550_29612615_29613242_29613486_29621100_29621293_29621751_29621818_29622103_29622206_29623304_29623476_29623889_29624025_29627485_29627647_29629086_29629108_29630457_29631600_29632300
H1_mix_00076554	chr6	-	2816	22	NIC	ENSG00000204681.11	novel	4525	23	NA	NA	75	-326	combination_of_known_junctions	FALSE	canonical	2	2	junction_21	38.4752475131976	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCAGAACCCTCTGGGG	3582	False	NA	NA	False	NA	NA	NA	29632859	29603639	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_29603717_29604493_29604638_29604859_29604989_29605568_29605697_29606390_29606485_29606896_29607005_29607101_29607219_29608600_29608734_29610923_29611002_29612550_29612615_29613242_29613486_29621100_29621293_29621751_29621818_29622103_29622206_29623304_29623476_29623889_29624025_29627485_29627647_29629086_29629108_29630457_29630644_29631395_29631600_29632300_29632386_29632681
H1_mix_00076557	chr6	-	1109	1	FSM	ENSG00000235238.1	ENST00000445436.1	284	1	-99	-726	-99	726	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCACCCAGGCTGAAG	-1	True	NA	NA	False	NA	NA	NA	29636442	29635333	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_29635300_29636400
H1_mix_00076560	chr6	-	1023	1	FSM	ENSG00000230521.1	ENST00000420084.1	975	1	-54	6	-54	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTAGAAGAAAACTCACCC	NA	False	NA	NA	False	NA	NA	NA	29888322	29887299	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_29887300_29888300
H1_mix_00076561	chr6	-	922	1	FSM	ENSG00000227766.1	ENST00000429656.1	993	1	-303	374	-303	-374	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGAGAACTGGGTCCGCG	2224	False	NA	NA	False	NA	NA	NA	29943370	29942448	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_29942400_29943400
H1_mix_00076562	chr6	-	9769	2	FSM	ENSG00000204623.10	ENST00000444051.1	9771	2	0	2	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTCTTCTAAGTGTCCT	NA	False	NA	-4	True	AATAAA	-15	NA	30035015	30012100	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30021762_30034907
H1_mix_00076566	chr6	-	7199	5	FSM	ENSG00000231074.10	ENST00000653541.1	7199	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	109.782455337818	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCTAGCCTGGTGAAGGA	1	True	NA	NA	False	NA	NA	NA	30326866	30286727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30292600_30294470_30294965_30296131_30296238_30314268_30314483_30326353
H1_mix_00076567	chr6	-	7030	5	FSM	ENSG00000231074.10	ENST00000657247.1	7011	5	0	-19	0	0	multi-exon	FALSE	canonical	2	10	junction_1	114.497543641774	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCTAGCCTGGTGAAGGA	-1	True	NA	NA	False	NA	NA	NA	30326868	30286727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30289495_30291536_30294965_30296131_30296238_30314268_30314483_30326353
H1_mix_00076568	chr6	-	15959	4	FSM	ENSG00000280128.1_ENSG00000231074.10	ENST00000668974.1	6734	4	114	-9339	0	4882	multi-exon	FALSE	canonical	3	63	junction_3	91.7205902001653	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTATTTGTCCTCTGTGA	18	True	NA	0	True	AATAAA	-18	NA	30326376	30277466	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30292600_30294470_30294965_30296131_30296238_30326150
H1_mix_00076573	chr6	-	8038	1	FSM	ENSG00000231074.10	ENST00000602319.1	3342	1	-4761	65	1752	-65	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAAGAGAAATTAAGGC	2170	False	NA	NA	False	NA	NA	NA	30308876	30300838	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30300800_30308900
H1_mix_00076575	chr6	-	3003	13	NNC	ENSG00000204590.13	novel	6801	12	NA	NA	-751	41949	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	137.682202513211	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCAGCCAGGATCTCATA	-17	True	NA	NA	False	AAAAAG	-1	NA	30557240	30499431	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_30499468_30545965_30546314_30546695_30546837_30547111_30547275_30547351_30547531_30552466_30552662_30553083_30553180_30553349_30553558_30554574_30554647_30554763_30554916_30555054_30555192_30555554_30555721_30556130
H1_mix_00076581	chr6	-	6317	14	NIC	ENSG00000137337.16	novel	6968	15	NA	NA	25	0	intron_retention	FALSE	canonical	3	57	junction_7	64.7663072608978	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTAGTGTAGTTTTTTA	6317	False	NA	-19	True	AATAAA	-19	NA	30717422	30699806	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_30700633_30702552_30702664_30702751_30702878_30703103_30703287_30703417_30703538_30703620_30706099_30707383_30707455_30711411_30711505_30711666_30711727_30711873_30713355_30713647_30713718_30713802_30714184_30715039_30715179_30717244
H1_mix_00076587	chr6	-	852	7	FSM	ENSG00000137312.15	ENST00000470643.5	852	7	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_4	236.408368436201	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGAGCCACTGCCAGGCC	1813	False	NA	NA	False	NA	NA	NA	30742732	30740157	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30740311_30740495_30740592_30740678_30740799_30741189_30741334_30741791_30741868_30742146_30742204_30742526
H1_mix_00076590	chr6	-	1349	1	FSM	ENSG00000137331.12	ENST00000376377.2	1350	1	1	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGAGTGTATCTTTGCA	-2	True	NA	-19	True	AATAAA	-19	NA	30744547	30743198	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30743200_30744500
H1_mix_00076592	chr6	-	3159	4	NNC	ENSG00000237923.1	novel	799	3	NA	NA	-98	2025	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	79.1496472933813	109	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATTTATGTTTGCATAA	-10	True	NA	NA	False	AATAAA	-17	NA	30848257	30837500	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_30840020_30843377_30843615_30847036_30847150_30847967
H1_mix_00076595	chr6	-	261	1	FSM	ENSG00000272501.1	ENST00000606367.1	2838	1	2404	173	2404	-173	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTCAAGTGCCGCCAAAG	NA	False	NA	NA	False	GGGGCT	-28	NA	31195633	31195372	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31195400_31195600
H1_mix_00076596	chr6	-	1533	8	Fusion	ENSG00000234745.13_ENSG00000204525.18	novel	1542	8	NA	NA	13	4	intron_retention	FALSE	canonical	3	209	junction_7	246.907732911362	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTCGCTGTGCTGAGTC	10	True	NA	-6	True	AATAAA	-25	NA	31357166	31268744	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr6_-_31269174_31269337_31269386_31269492_31269526_31269965_31270086_31270209_31270486_31271072_31271349_31271598_31271869_31357085
H1_mix_00076597	chr6	-	1087	1	FSM	ENSG00000272221.1	ENST00000606743.1	1207	1	51	69	51	-69	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAGTAAGCCACCTCGAA	7923	False	NA	-80	True	TTTAAA	-33	NA	31395444	31394357	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31394400_31395400
H1_mix_00076598	chr6	-	1719	12	NNC	ENSG00000198563.14	novel	1681	11	NA	NA	0	31771	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	480.321672518437	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGACGGGAGATGGGAAAG	5514	False	NA	NA	False	AAGAAA	-34	NA	31542017	31498447	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_31498484_31530237_31530451_31530778_31530927_31531052_31531198_31531295_31531406_31532779_31532912_31535366_31535486_31536499_31536684_31538762_31538856_31539146_31539275_31540321_31540665_31541949
H1_mix_00076601	chr6	-	604	3	FSM	ENSG00000213760.11	ENST00000483251.1	662	3	58	0	-35	0	multi-exon	FALSE	canonical	1	1	junction_2	15.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTTGTTGTTCTTTAAC	741	False	NA	NA	False	TATAAA	-20	NA	31546790	31545237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31545582_31546108_31546210_31546631
H1_mix_00076602	chr6	-	973	4	FSM	ENSG00000204475.10	ENST00000340027.10	1063	4	92	-2	45	2	multi-exon	FALSE	canonical	0	0	junction_1	0.816496580927726	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTTTTTTTTATTTTA	92	False	NA	NA	False	AATAAA	-37	NA	31592914	31588892	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31589177_31589525_31589634_31589781_31590127_31592678
H1_mix_00076603	chr6	-	3405	24	NIC	ENSG00000204463.14	novel	3644	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_23	89.2391066038204	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	8842	False	NA	-13	True	AATAAA	-31	NA	31651920	31639027	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_31639227_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31651865
H1_mix_00076604	chr6	-	3637	25	NIC	ENSG00000204463.14	novel	3644	25	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_24	81.7560735086731	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	21	True	NA	-13	True	AATAAA	-31	NA	31652374	31639027	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652234
H1_mix_00076605	chr6	-	3741	26	NIC	ENSG00000204463.14	novel	3843	26	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	122	junction_14	81.6837413442847	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	13	True	NA	-13	True	AATAAA	-31	NA	31652382	31639027	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644306_31644415_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652246
H1_mix_00076606	chr6	-	3516	24	NIC	ENSG00000204463.14	novel	3779	25	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_20	99.0239130196158	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	8290	False	NA	-13	True	AATAAA	-31	NA	31652472	31639027	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31649198_31649396_31649509_31649628_31651655_31651777_31652399
H1_mix_00076607	chr6	-	3887	26	FSM	ENSG00000204463.14	ENST00000676615.2	3843	26	-44	0	0	0	multi-exon	FALSE	canonical	3	112	junction_25	82.7801908671392	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	8057	False	NA	-13	True	AATAAA	-31	NA	31652705	31639027	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644306_31644415_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652423
H1_mix_00076608	chr6	-	3779	25	FSM	ENSG00000204463.14	ENST00000211379.9	3779	25	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_24	69.6828006636741	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	8057	False	NA	-13	True	AATAAA	-31	NA	31652705	31639027	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652423
H1_mix_00076609	chr6	-	3701	24	FSM	ENSG00000204463.14	ENST00000375964.11	3701	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	92.9211711364457	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	8057	False	NA	-13	True	AATAAA	-31	NA	31652705	31639027	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652423
H1_mix_00076616	chr6	-	1684	3	FSM	ENSG00000204438.11	ENST00000375896.9	2365	3	-175	856	13	-8	multi-exon	FALSE	canonical	3	104	junction_2	47	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTTTCTGGAAGCTATT	3430	False	NA	-16	True	AATAAA	-20	NA	31665172	31662083	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31662711_31663852_31664578_31664840
H1_mix_00076617	chr6	-	1428	2	FSM	ENSG00000204428.12	ENST00000460141.1	1428	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGACTGCAGCAAACTTTG	1096	False	NA	NA	False	AAAACA	-21	NA	31680364	31676956	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31677121_31679100
H1_mix_00076620	chr6	-	1932	20	NNC	ENSG00000204427.12	novel	1977	20	NA	NA	14	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	62.0267121439673	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGCTAATTGTATAACTT	37	True	NA	-7	True	AATAAA	-19	NA	31703286	31686957	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_31687296_31687497_31687545_31687645_31687741_31687823_31687901_31688040_31688104_31688248_31688306_31688722_31688787_31689014_31689120_31689580_31689705_31690077_31690128_31690538_31690603_31691578_31691681_31691803_31691919_31693026_31693150_31693358_31693433_31696947_31697034_31700941_31701029_31701273_31701341_31702073_31702131_31703149
H1_mix_00076622	chr6	-	1122	11	FSM	ENSG00000204427.12	ENST00000498420.5	1137	11	15	0	-1	0	multi-exon	FALSE	canonical	3	26	junction_10	70.5740037124152	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGCAGCTCCCAGGCC	-18	True	NA	NA	False	NA	NA	NA	31703341	31689014	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31689120_31689580_31689705_31690077_31690128_31690538_31690603_31691578_31691681_31691803_31691919_31693026_31693150_31693358_31693433_31696947_31697034_31700941_31701029_31703149
H1_mix_00076623	chr6	-	2928	13	NNC	ENSG00000213722.10	novel	1688	7	NA	NA	-5950	17973	intron_retention	FALSE	non_canonical	0	0	junction_1	1211.77036465936	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGGCGTGGTGGCTCAC	1487	False	NA	NA	False	NA	NA	NA	31736567	31709064	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_31709092_31727041_31727354_31727542_31727693_31728172_31728293_31728450_31728525_31728645_31728746_31728864_31729226_31730050_31731004_31732216_31732399_31733565_31733673_31733835_31733962_31734153_31734264_31736261
H1_mix_00076624	chr6	-	1264	7	NNC	ENSG00000213719.8	novel	1254	6	NA	NA	0	21516	intron_retention	FALSE	non_canonical	0	0	junction_1	1122.54528490688	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGGCGTGGTGGCTCAC	1487	False	NA	NA	False	NA	NA	NA	31736567	31709064	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_31709093_31730598_31731004_31732216_31732399_31733565_31733673_31733835_31733962_31734153_31734264_31736261
H1_mix_00076625	chr6	-	1193	6	FSM	ENSG00000213722.10	ENST00000375789.7	1193	6	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_4	37.8597411507263	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGGCTGTGACTGGTGT	-17	True	NA	-7	True	AATAAA	-18	NA	31729299	31727039	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31727354_31727542_31727693_31728172_31728293_31728450_31728525_31728645_31728746_31728864
H1_mix_00076626	chr6	-	937	6	FSM	ENSG00000213722.10	ENST00000480913.5	937	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_5	236.635077704046	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTGTGACTGGTGTCT	10	True	NA	-5	True	AATAAA	-20	NA	31730227	31727037	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31727354_31727542_31727693_31728172_31728293_31728450_31728525_31728645_31728746_31730050
H1_mix_00076627	chr6	-	1127	7	FSM	ENSG00000213719.8	ENST00000375779.6	1127	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	1117.070573718	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGATTTAAAGTGTGGGC	1482	False	NA	-5	True	AATAAA	-33	NA	31736572	31730580	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31731004_31732216_31732399_31733565_31733673_31733835_31733962_31734153_31734264_31736261_31736413_31736544
H1_mix_00076628	chr6	-	4144	31	NNC	ENSG00000204394.13	novel	4111	30	NA	NA	0	4938	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	164.275459721368	1778	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAGAAAAAAAAAAGAAAA	-53	True	NA	NA	False	AAAAAG	-43	NA	31795752	31772579	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_31772613_31777517_31777663_31778966_31779293_31779424_31779537_31779607_31779815_31779997_31780154_31780440_31780569_31780704_31780784_31780869_31780939_31781018_31781124_31781480_31781607_31781690_31781762_31781846_31781953_31782086_31782178_31782284_31782444_31782529_31782634_31782720_31782846_31783095_31783187_31784213_31784309_31784393_31784503_31784594_31784715_31785245_31785328_31785568_31785734_31791609_31791738_31791870_31791972_31792216_31792302_31792391_31792517_31792756_31792896_31792985_31793121_31794830_31795251_31795545
H1_mix_00076629	chr6	-	4629	30	NNC	ENSG00000204394.13	novel	4111	30	NA	NA	-188	4938	intron_retention	FALSE	non_canonical	0	0	junction_1	207.010256111993	53	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAGAAAAAAAAAAGAAAA	29	False	NA	NA	False	AAAAAG	-43	NA	31795940	31772579	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_31772612_31777517_31777663_31778966_31779293_31779424_31779537_31779607_31779815_31779997_31780154_31780440_31780569_31780704_31780784_31780869_31780939_31781018_31781124_31781480_31781607_31781690_31781762_31781846_31781953_31782086_31782178_31782284_31782444_31782529_31782634_31782720_31782846_31783095_31783187_31784213_31784309_31784393_31784503_31784594_31784715_31785245_31785328_31785568_31785734_31791609_31791738_31791870_31791972_31792216_31792305_31792391_31792517_31792756_31792896_31792985_31793121_31794830
H1_mix_00076635	chr6	-	451	6	FSM	ENSG00000204385.13	ENST00000465707.5	681	6	34	196	4	101	multi-exon	FALSE	canonical	3	6	junction_2	2.60768096208106	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAATATTGCCCCTAACCT	2224	False	NA	NA	False	AAAACA	-36	NA	31878963	31874720	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31874847_31874928_31875029_31875851_31875931_31876055_31876130_31877033_31877083_31878940
H1_mix_00076637	chr6	-	1829	9	FSM	ENSG00000204371.11	ENST00000461880.5	1825	9	0	-4	0	4	multi-exon	TRUE	canonical	3	658	junction_8	132.421615965823	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTTGTGTTGGGGTGGG	7412	False	NA	NA	False	AATAAA	-24	NA	31885141	31879754	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31880265_31880672_31880849_31881013_31881093_31882698_31882786_31882893_31883010_31883361_31883440_31883805_31883951_31884391_31884800_31884911
H1_mix_00076640	chr6	-	1270	11	NIC	ENSG00000204356.14	novel	1445	11	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_5	235.082198390265	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATCTCCCTCAGCCTCTG	6	True	NA	-30	True	AGTAAA	-20	NA	31958952	31952227	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_31952399_31953728_31953832_31954079_31954135_31954297_31954443_31954554_31954878_31955058_31955097_31955218_31955294_31956692_31956839_31956940_31957011_31958371_31958455_31958891
H1_mix_00076648	chr6	-	1801	6	FSM	ENSG00000204348.10	ENST00000375356.7	1533	6	-268	0	0	0	multi-exon	FALSE	canonical	3	78	junction_4	22.2207110597298	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGCAGATAATAAAAGCATA	-10	True	NA	-34	True	NA	NA	NA	31972252	31969843	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31970025_31970108_31970204_31970342_31970479_31970605_31970826_31970911_31971148_31971319
H1_mix_00076649	chr6	-	1625	2	FSM	ENSG00000204348.10	ENST00000498357.1	1625	2	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCAAATAGTAATGCTTTA	1491	False	NA	-77	True	NA	NA	NA	31971683	31969886	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31971148_31971319
H1_mix_00076654	chr6	-	2582	18	FSM	ENSG00000213676.13	ENST00000375201.8	2624	18	35	7	0	-7	multi-exon	FALSE	canonical	3	21	junction_17	19.0401142737404	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGAATGGTGGCTGCCTT	5	True	NA	-9	True	AATAAA	-17	NA	32128218	32115270	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32115969_32116479_32116565_32116703_32116816_32117036_32117108_32117322_32117405_32117586_32117695_32117858_32118039_32118774_32118867_32118955_32119142_32119823_32119958_32120770_32120903_32120988_32121125_32121262_32121349_32126116_32126253_32127102_32127195_32127441_32127521_32127670_32127751_32128125
H1_mix_00076657	chr6	-	2446	5	FSM	ENSG00000204310.13	ENST00000490711.5	2448	5	2	0	2	0	multi-exon	FALSE	canonical	1	1	junction_3	217.638461674402	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTTGGTGGTTGCA	0	True	NA	-30	True	AATAAA	-13	NA	32177340	32168211	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32169449_32169965_32170039_32170164_32170261_32171296_32171506_32176509
H1_mix_00076660	chr6	-	1368	10	FSM	ENSG00000204305.16	ENST00000375055.6	1369	10	0	1	0	0	multi-exon	FALSE	canonical	1	1	junction_1	6.93532734858988	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTGTGTCTGTGTGTG	7	True	NA	-8	True	ATTAAA	-17	NA	32184246	32180968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32181240_32181523_32181633_32182246_32182389_32182567_32182699_32182840_32183024_32183113_32183202_32183323_32183389_32183554_32183751_32183880_32183988_32184170
H1_mix_00076661	chr6	-	1537	11	FSM	ENSG00000204305.16	ENST00000375069.7	1538	11	0	1	0	0	multi-exon	FALSE	canonical	0	0	junction_7	8.25832912882503	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTGTGTCTGTGTGTG	8571	False	NA	-8	True	ATTAAA	-17	NA	32184322	32180968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32181240_32181350_32181478_32181605_32181633_32182246_32182389_32182567_32182699_32182840_32183024_32183113_32183202_32183275_32183389_32183554_32183751_32183880_32183988_32184170
H1_mix_00076662	chr6	-	1419	4	FSM	ENSG00000213654.10	ENST00000472768.5	1417	4	0	-2	0	2	multi-exon	FALSE	canonical	1	4	junction_2	44.0302926025556	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGACTGGTATCTGGGGGG	8	True	NA	2	True	AATAAA	-20	NA	32192885	32190763	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32191504_32191708_32191871_32192147_32192251_32192471
H1_mix_00076663	chr6	-	1977	3	NIC	ENSG00000204301.6	novel	5267	10	NA	NA	-571	0	intron_retention	FALSE	canonical	2	3	junction_2	1	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTTTTGGAGGAATTGG	NA	False	NA	0	True	AATAAA	-18	NA	32197548	32194842	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_32196422_32196924_32197073_32197298
H1_mix_00076664	chr6	-	1896	5	FSM	ENSG00000204264.12	ENST00000650411.1	2373	5	477	0	-33	0	multi-exon	FALSE	canonical	3	157	junction_3	15.8271917913444	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAAACGGTTATAAAT	9940	False	NA	NA	False	NA	NA	NA	32844080	32840737	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32841048_32841530_32841736_32842133_32842264_32842671_32842784_32842941
H1_mix_00076666	chr6	-	1031	3	FSM	ENSG00000168394.12	ENST00000487296.1	1031	3	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_2	10	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGCTATCCGGGAGGGGGG	6299	False	NA	NA	False	NA	NA	NA	32848230	32845674	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32845786_32847067_32847676_32847918
H1_mix_00076668	chr6	-	3138	6	NNC	ENSG00000204252.14	novel	3464	5	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.7657857400131	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTTTTTTTTTACTGTT	13	True	NA	NA	False	ATTAAA	-25	NA	33009579	33004177	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_33005395_33005712_33006842_33007079_33007216_33007310_33007593_33008012_33008262_33009454
H1_mix_00076669	chr6	-	1509	6	FSM	ENSG00000231389.8	ENST00000419277.5	1704	6	-264	459	-199	-21	multi-exon	FALSE	canonical	2	4	junction_5	11.6378692207809	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTATTTCAGAGCGGGG	NA	False	NA	-22	True	AATAAA	-4	NA	33080974	33065027	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33065348_33068637_33068805_33069018_33069301_33069640_33069887_33073470_33073670_33080679
H1_mix_00076670	chr6	-	983	5	NIC	ENSG00000231389.8	novel	1704	6	NA	NA	0	-84	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	9.86154146165801	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTCCTTTGAAGAACCC	2	True	NA	45	True	NA	NA	NA	33080710	33065090	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_33065348_33068637_33068805_33069018_33069301_33069640_33069887_33080679
H1_mix_00076672	chr6	-	5058	58	ISM	ENSG00000204248.12	ENST00000341947.7	6422	66	11316	-1	-1360	1	3prime_fragment	TRUE	canonical	2	4	junction_29	7.08585176021514	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGTGTCACTGCTTGT	8282	False	NA	-1	True	NA	NA	NA	33181151	33162692	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_33163819_33164266_33164474_33164851_33164965_33165548_33165817_33165930_33165985_33166170_33166207_33166512_33166567_33166719_33166828_33167069_33167124_33167263_33167318_33167425_33167534_33167798_33167853_33168518_33168573_33168705_33168760_33168954_33169009_33169382_33169491_33169830_33169885_33170046_33170101_33170325_33170380_33170556_33170611_33170809_33170918_33171113_33171168_33171270_33171325_33171466_33171575_33171712_33171821_33172049_33172104_33172288_33172379_33172529_33172638_33173059_33173114_33173347_33173402_33173501_33173556_33173700_33173746_33173872_33173927_33174010_33174056_33174164_33174219_33174526_33174581_33175573_33175682_33176015_33176070_33176258_33176304_33176432_33176487_33176720_33176766_33176991_33177046_33177180_33177226_33177411_33177466_33177661_33177707_33178131_33178186_33178307_33178353_33178434_33178489_33178678_33178733_33178919_33178974_33179072_33179127_33179230_33179285_33179430_33179488_33179718_33179806_33180257_33180333_33180667_33180731_33180963_33181006_33181110
H1_mix_00076674	chr6	-	3360	19	NNC	ENSG00000237441.10	novel	2896	18	NA	NA	-435	47347	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	75.7947195137817	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	-4	True	NA	NA	False	NA	NA	NA	33299377	33244306	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_33244338_33291655_33292314_33292429_33292545_33293015_33293307_33293412_33293525_33293603_33293700_33293794_33293917_33294033_33294067_33294687_33294763_33294976_33295046_33295126_33295212_33295318_33295423_33295507_33295760_33296027_33296326_33296413_33296465_33296597_33296777_33297031_33297116_33298454_33298652_33298869
H1_mix_00076675	chr6	-	3338	19	FSM	ENSG00000223501.9	ENST00000482399.5	3338	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	82.1644692065859	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCATTTCCTTTCTCCTTC	-5	True	NA	-4	True	AATAAA	-24	NA	33271876	33250271	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33250988_33251517_33251637_33251859_33251972_33263483_33263550_33263771_33263880_33264007_33264104_33264373_33264498_33264781_33264901_33266556_33266713_33267187_33267322_33267681_33267740_33267864_33267998_33268107_33268209_33268498_33268650_33269013_33269190_33269489_33269558_33269743_33269820_33270198_33270284_33271136
H1_mix_00076678	chr6	-	2180	20	NIC	ENSG00000223501.9	novel	2936	20	NA	NA	75	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_19	58.4476942572495	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCTCCATGGACTTCTGC	4528	False	NA	NA	False	NA	NA	NA	33271972	33250810	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_33250988_33251517_33251637_33251859_33251972_33263483_33263550_33263771_33263880_33264007_33264104_33264373_33264498_33264781_33264901_33266556_33266713_33267187_33267322_33267681_33267740_33267864_33267998_33268107_33268209_33268498_33268650_33269013_33269190_33269489_33269558_33269743_33269820_33269998_33270052_33270198_33270284_33271904
H1_mix_00076682	chr6	-	871	4	FSM	ENSG00000227057.10	ENST00000473611.5	872	4	0	1	0	-1	multi-exon	FALSE	canonical	3	713	junction_3	19.7709101684492	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATGTGTCTGGATCATCT	8692	False	NA	-11	True	ATTAAA	-20	NA	33280851	33279108	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33279611_33279763_33279860_33280427_33280523_33280673
H1_mix_00076683	chr6	-	426	2	FSM	ENSG00000227057.10	ENST00000488944.5	538	2	0	112	0	-112	multi-exon	FALSE	canonical	3	747	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGGCCATGGAGCTCA	9960	False	NA	NA	False	NA	NA	NA	33288026	33287354	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33287719_33287964
H1_mix_00076685	chr6	-	7793	26	Fusion	ENSG00000231925.13_ENSG00000237441.10	novel	2896	18	NA	NA	0	671	multi-exon	FALSE	canonical	2	4	junction_18	72.6382158371198	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAGGGGCTGTGGGGATA	4	True	NA	NA	False	AATACA	-18	NA	33314254	33290982	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr6_-_33292314_33292429_33292545_33293015_33293307_33293412_33293525_33293603_33293700_33293794_33293917_33294033_33294067_33294687_33294763_33294976_33295046_33295126_33295212_33295318_33295423_33295507_33295760_33296027_33296326_33296413_33296465_33296597_33296777_33297031_33297116_33298454_33298652_33298869_33299229_33299379_33301772_33303954_33303990_33304127_33304218_33304296_33304639_33304988_33305388_33313216_33313478_33313693_33313865_33314004
H1_mix_00076690	chr6	-	2645	2	FSM	ENSG00000236104.3	ENST00000418724.1	2645	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAACCCGTGTGTTTGCTGG	4994	False	NA	-2	True	ATTAAA	-31	NA	33317942	33314405	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33316986_33317877
H1_mix_00076692	chr6	-	817	4	FSM	ENSG00000204209.13	ENST00000468536.5	817	4	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_3	414.640674426532	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCACCACTGTCTTAGAGA	6	True	NA	NA	False	NA	NA	NA	33322930	33319532	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33319855_33320010_33320225_33320379_33320592_33322861
H1_mix_00076693	chr6	-	463	2	FSM	ENSG00000204209.13	ENST00000498030.1	463	2	0	0	0	0	multi-exon	FALSE	canonical	3	629	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGTCTCTCTTCCCCTT	-21	True	NA	NA	False	NA	NA	NA	33322957	33321610	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33321978_33322861
H1_mix_00076694	chr6	-	1024	7	NNC	ENSG00000112514.18	novel	855	6	NA	NA	-174	0	intron_retention	FALSE	canonical	3	99	junction_6	869.1185988626	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTGTTTTTTGTCAT	7171	False	NA	-11	True	AATAAA	-24	NA	33418491	33416541	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_33416777_33416919_33416970_33417096_33417143_33417250_33417311_33417480_33417696_33417958_33418087_33418201
H1_mix_00076700	chr6	-	544	4	FSM	ENSG00000161904.12	ENST00000512368.5	544	4	0	0	0	0	multi-exon	FALSE	canonical	3	536	junction_3	56.5115524079418	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCGCATGGGTGTTGGCT	4462	False	NA	NA	False	NA	NA	NA	33784669	33778318	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33778388_33780099_33780180_33781076_33781154_33784351
H1_mix_00076703	chr6	-	809	4	FSM	ENSG00000186577.14	ENST00000413013.6	806	4	0	-3	0	3	multi-exon	FALSE	canonical	2	5	junction_2	34.8807492274273	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTGATTTCATCAAGAGG	16	True	NA	-23	True	AATAAA	-18	NA	34249020	34246391	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_34246869_34247043_34247150_34247680_34247865_34248978
H1_mix_00076708	chr6	-	4782	9	FSM	ENSG00000270800.3	ENST00000639725.1	4782	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	4378.21681738125	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATAGTCAAGTTCCTTTG	-4	True	NA	NA	False	NA	NA	NA	34426071	34284886	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_34288932_34293450_34293536_34295640_34295686_34341861_34341973_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34426031
H1_mix_00076709	chr6	-	625	8	NNC	ENSG00000124614.16	novel	588	6	NA	NA	0	17572	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4044.16252020068	858	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTGGCTCTGTCACCCA	0	True	NA	NA	False	NA	NA	NA	34426067	34399881	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_34399902_34400511_34400532_34417454_34417548_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34426031
H1_mix_00076710	chr6	-	734	3	FSM	ENSG00000124614.16	ENST00000480942.1	734	3	0	0	0	0	multi-exon	FALSE	canonical	3	6754	junction_2	1383	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGTGGAGAACGGATGG	38	False	NA	NA	False	AAGAAA	-8	NA	34426050	34424275	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_34424841_34425071_34425222_34426031
H1_mix_00076714	chr6	-	3827	11	FSM	ENSG00000096060.15	ENST00000539068.5	3827	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_10	212.818796162369	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTTTTTGGTTTTGCTT	1	True	NA	-1	True	AATAAA	-22	NA	35688915	35573584	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_35575943_35576993_35577234_35580035_35580222_35587033_35587118_35591129_35591221_35597247_35597405_35619095_35619211_35620131_35620275_35637013_35637159_35642719_35642844_35688731
H1_mix_00076715	chr6	-	7376	7	FSM	ENSG00000096060.15	ENST00000542713.1	7384	7	0	8	0	-8	multi-exon	FALSE	canonical	1	4	junction_1	255.981553154823	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTGTCTCAAAAAAAAAAAA	-2	True	NA	NA	False	NA	NA	NA	35688942	35580564	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_35587118_35597247_35597405_35619095_35619211_35620131_35620275_35637013_35637159_35642719_35642844_35688803
H1_mix_00076716	chr6	-	4342	17	NNC	ENSG00000096063.16	novel	4348	16	NA	NA	0	11108	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	175.04994822907	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGTACACCAGTGCTGT	18	False	NA	NA	False	NA	NA	NA	35921128	35821857	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_35821892_35833035_35835489_35838336_35838430_35842534_35842605_35857260_35857369_35869009_35869111_35869481_35869902_35870280_35870495_35870933_35870960_35872562_35872729_35874232_35874340_35886723_35886812_35888023_35888112_35888814_35888924_35890894_35891014_35920467_35920529_35921043
H1_mix_00076717	chr6	-	4360	17	NNC	ENSG00000096063.16	novel	4357	16	NA	NA	0	11108	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	175.04994822907	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGTACACCAGTGCTGT	-1	True	NA	NA	False	NA	NA	NA	35921147	35821857	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_35821891_35833035_35835489_35838336_35838430_35842534_35842605_35857260_35857369_35869009_35869111_35869481_35869902_35870280_35870495_35870933_35870960_35872562_35872729_35874232_35874340_35886723_35886812_35888023_35888112_35888814_35888924_35890894_35891014_35920467_35920529_35921043
H1_mix_00076723	chr6	-	581	1	FSM	ENSG00000237719.1	ENST00000453556.1	656	1	-31	106	-31	-106	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCGTAGCTGAAAAACATCT	NA	False	NA	NA	False	NA	NA	NA	36092677	36092096	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_36092100_36092700
H1_mix_00076724	chr6	-	1296	8	FSM	ENSG00000010030.14	ENST00000339796.9	1530	8	0	234	0	-104	multi-exon	TRUE	canonical	1	2	junction_1	1.55182578445717	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGTGTCTTAAATATAAC	202	False	NA	NA	False	AATAAA	-36	NA	36387566	36354324	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_36354688_36366874_36366976_36368928_36369072_36371329_36371561_36373452_36373579_36375870_36376036_36385533_36385670_36387535
H1_mix_00076725	chr6	-	1572	11	FSM	ENSG00000137409.20	ENST00000460219.2	1572	11	0	0	0	0	multi-exon	FALSE	canonical	3	1938	junction_3	469.711922352414	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCCGAGGGCAGAACCT	349	False	NA	NA	False	NA	NA	NA	36986125	36969465	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_36970115_36970405_36970474_36970646_36970695_36972702_36972797_36975657_36975718_36977198_36977251_36977633_36977692_36978077_36978156_36978504_36978612_36981587_36981673_36985852
H1_mix_00076726	chr6	-	373	3	FSM	ENSG00000137409.20	ENST00000492754.1	373	3	0	0	0	0	multi-exon	FALSE	canonical	3	1148	junction_2	1074	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACCTGAGTGTGCAGGTG	73	False	NA	NA	False	NA	NA	NA	36972676	36970055	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_36970115_36970405_36970695_36972651
H1_mix_00076727	chr6	-	595	5	NNC	ENSG00000198937.9	novel	572	4	NA	NA	0	13416	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	203.914810644053	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGATAAAACAACATATTGAC	-3	True	NA	NA	False	NA	NA	NA	37499893	37469521	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_37469547_37482939_37483290_37484809_37484863_37485099_37485195_37499821
H1_mix_00076728	chr6	-	434	3	FSM	ENSG00000112139.17	ENST00000510077.1	655	3	221	0	221	0	multi-exon	FALSE	canonical	0	0	junction_1	0	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGACCGATCTCCGTGTG	1	True	NA	NA	False	NA	NA	NA	37648409	37646302	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_37646376_37647172_37647273_37648148
H1_mix_00076729	chr6	-	233	1	FSM	ENSG00000243313.2	ENST00000496478.2	264	1	82	-51	82	51	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TACAAAAAAAAAAGAAAAAC	NA	False	NA	NA	False	NA	NA	NA	37833103	37832870	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_37832900_37833100
H1_mix_00076732	chr6	-	1973	2	FSM	ENSG00000112167.10	ENST00000373249.5	1972	2	0	-1	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTTTGTTGACTGATTTA	5600	False	NA	-1	True	ATTAAA	-28	NA	39109572	39104062	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_39105777_39109313
H1_mix_00076734	chr6	-	3886	6	NNC	ENSG00000164626.9	novel	3783	5	NA	NA	-78	34102	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	74.1015519405633	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACATTTAAAAATAGTAAG	NA	False	NA	NA	False	NA	NA	NA	39229553	39154868	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_39154896_39188972_39191756_39194168_39194338_39194593_39194761_39195875_39195988_39228925
H1_mix_00076736	chr6	-	2852	9	FSM	ENSG00000124615.20	ENST00000373195.7	2852	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	47.6392695158102	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGCACCATCTAAGGGAA	-13	True	NA	-21	True	AATAAA	-19	NA	39934497	39905320	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_39907118_39909834_39909956_39912263_39912375_39912891_39913005_39913316_39913429_39913773_39913836_39916067_39916233_39925677_39925846_39934294
H1_mix_00076737	chr6	-	554	2	FSM	ENSG00000204092.2	ENST00000373171.2	554	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGGGTGTTTCTACTT	NA	False	NA	0	True	ATTAAA	-16	NA	40346151	40344343	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_40344757_40346010
H1_mix_00076738	chr6	-	1810	2	ISM	ENSG00000124602.10	ENST00000470102.1	644	5	2463	-1450	2463	-28	3prime_fragment	FALSE	canonical	3	6	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTTTTTTCTATGATGAA	8801	False	NA	-40	True	ATTAAA	-10	NA	41030524	41026922	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_41028596_41030387
H1_mix_00076742	chr6	-	1309	2	FSM	ENSG00000112561.19	ENST00000679217.1	1495	2	197	-11	197	-3	multi-exon	FALSE	canonical	3	19	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACTTGCTGGTCCTGTCTC	NA	False	NA	-3	True	AGTAAA	-12	NA	41686300	41683980	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_41685079_41686089
H1_mix_00076746	chr6	-	2113	5	FSM	ENSG00000112576.13	ENST00000372988.8	2133	5	38	-18	-36	-4	multi-exon	FALSE	canonical	0	0	junction_4	109.097433517017	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGATTGGTGTGTGGGTAA	NA	False	NA	-6	True	AATAAA	-33	NA	42048930	41934937	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_41936108_41936558_41936696_41937234_41937395_41940369_41940586_42048500
H1_mix_00076747	chr6	-	1257	4	FSM	ENSG00000112576.13	ENST00000510503.5	1257	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	117.663361615529	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTGACAGCTGCTCCTAG	-5	True	NA	NA	False	NA	NA	NA	42048708	41935434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_41936108_41937234_41937395_41940369_41940586_42048500
H1_mix_00076754	chr6	-	7809	17	ISM	ENSG00000124496.12	ENST00000372922.8	7286	18	525	-289	-259	-5	3prime_fragment	FALSE	canonical	3	40	junction_10	16.062378404209	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTCGTTTGGCTTAAATA	687	False	NA	-6	True	AATAAA	-15	NA	42451520	42224935	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_42228670_42232680_42232893_42236204_42236412_42243247_42243362_42246455_42246545_42254850_42254927_42256727_42256832_42256962_42257103_42258134_42258202_42259338_42259724_42263319_42263569_42264703_42264855_42265750_42265798_42268153_42269849_42300637_42300750_42362996_42363080_42451176
H1_mix_00076755	chr6	-	7646	18	FSM	ENSG00000124496.12	ENST00000541110.5	7646	18	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_17	21.9407822074654	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTGGCTTAAATATTTCT	156	False	NA	-1	True	AATAAA	-20	NA	42452051	42224930	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_42228670_42232680_42232893_42236204_42236412_42243247_42243362_42246455_42246545_42254850_42254927_42256727_42256832_42256962_42257103_42258134_42258202_42259338_42259724_42263259_42263569_42264703_42264855_42265750_42265798_42268153_42269849_42300637_42300750_42362996_42363080_42451176_42451262_42452020
H1_mix_00076764	chr6	-	400	1	FSM	ENSG00000272170.1	ENST00000606123.1	409	1	4	5	4	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATGGGGATTATTTAAT	NA	False	NA	-4	True	ATTAAA	-18	NA	43074735	43074335	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43074300_43074700
H1_mix_00076766	chr6	-	834	4	FSM	ENSG00000112667.13	ENST00000509253.5	834	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	605.378302294432	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTCTGTCTTGTGTGAG	17	True	NA	-7	True	ATTAAA	-19	NA	43229453	43225630	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43225882_43226032_43226144_43226326_43226396_43229050
H1_mix_00076767	chr6	-	1182	8	NNC	ENSG00000146215.14	novel	991	8	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_6	49.7807437567941	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCAACTCTTCTTTGG	6	True	NA	-15	True	AATAAA	-14	NA	43308814	43305471	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_43305876_43306066_43306125_43306218_43306314_43306445_43306518_43307611_43307744_43307838_43307897_43308111_43308410_43308749
H1_mix_00076768	chr6	-	1021	8	NNC	ENSG00000146215.14	novel	991	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	45.0423836683918	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCAGCCTCTGTGGCTTCT	-6	True	NA	-56	True	CATAAA	-17	NA	43308826	43305512	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_43305876_43305995_43306125_43306218_43306314_43306445_43306518_43307611_43307744_43307838_43307897_43308314_43308410_43308749
H1_mix_00076771	chr6	-	3321	30	NIC	ENSG00000124571.18	novel	5323	32	NA	NA	5	-53	combination_of_known_splicesites	FALSE	canonical	1	9	junction_16	110.041566030564	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGAAGGACTCACTGGAC	34	True	NA	NA	False	NA	NA	NA	43575980	43524586	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_43524636_43524830_43524969_43525106_43525215_43525838_43525922_43526684_43526748_43527633_43527732_43528158_43528206_43528827_43528926_43530687_43530825_43531478_43531576_43533906_43534008_43546570_43546753_43547607_43547708_43548260_43548461_43549488_43549579_43549892_43549935_43553372_43553504_43555835_43555965_43558500_43558592_43560177_43560304_43560923_43561008_43562246_43562347_43565659_43565737_43567168_43567355_43568710_43568738_43570501_43570685_43570856_43570995_43572505_43572579_43573479_43573602_43575759
H1_mix_00076773	chr6	-	1850	2	FSM	ENSG00000172432.19	ENST00000432918.5	1850	2	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCTTATGCGTTAGCTA	8506	False	NA	-8	True	AATAAA	-19	NA	43622804	43620489	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43622168_43622632
H1_mix_00076774	chr6	-	897	7	FSM	ENSG00000172432.19	ENST00000442748.5	946	7	49	0	49	0	multi-exon	FALSE	canonical	2	4	junction_6	15.3993145590604	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGAGGATGATGCCGTCA	2488	False	NA	NA	False	NA	NA	NA	43628822	43624560	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43624730_43624887_43625063_43625362_43625561_43625755_43625865_43626225_43626411_43626921_43626949_43628788
H1_mix_00076775	chr6	-	898	3	FSM	ENSG00000172432.19	ENST00000480263.1	898	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGCGGGTCCTCAAGCA	5446	False	NA	NA	False	NA	NA	NA	43625864	43624613	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43624730_43624887_43625561_43625755
H1_mix_00076776	chr6	-	1165	5	FSM	ENSG00000096080.12	ENST00000427312.1	803	5	-16	-346	-16	72	multi-exon	FALSE	canonical	3	665	junction_1	27.1753564834024	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGCTTGGGAAGTGCAG	-16	True	NA	11	True	CATAAA	-34	NA	43687807	43671437	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43671907_43675201_43675618_43678517_43678626_43681088_43681121_43687667
H1_mix_00076778	chr6	-	1859	3	FSM	ENSG00000157593.19	ENST00000495706.1	1859	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	199	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTTTTGGTTGACTG	8073	False	NA	-19	True	ATTAAA	-24	NA	44257554	44254095	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_44255645_44256341_44256497_44257399
H1_mix_00076779	chr6	-	1900	3	FSM	ENSG00000157593.19	ENST00000393810.5	1898	3	-2	0	-2	0	multi-exon	FALSE	canonical	3	9	junction_1	178	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTTTTGGTTGACTG	8071	False	NA	-19	True	ATTAAA	-24	NA	44257556	44254095	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_44255645_44256684_44256879_44257399
H1_mix_00076783	chr6	-	2024	11	FSM	ENSG00000146233.8	ENST00000619708.4	2269	11	23	222	11	-222	multi-exon	FALSE	canonical	1	1	junction_9	2.96816441593117	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGAATGGTGTCTTACAT	-3	True	NA	-5	True	AATAAA	-27	NA	46652807	46549801	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_46550438_46553766_46553855_46587076_46587166_46588033_46588130_46595986_46596121_46625417_46625509_46630962_46631071_46636388_46636483_46637828_46637979_46642162_46642299_46652405
H1_mix_00076784	chr6	-	209	1	FSM	ENSG00000232702.3	ENST00000416077.1	457	1	245	3	245	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACAAATCATCCTCCCCA	5300	False	NA	NA	False	AATGAA	-31	NA	51410292	51410083	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_51410100_51410300
H1_mix_00076785	chr6	-	1209	6	ISM	ENSG00000170899.11	ENST00000370963.9	1240	7	1023	-5	0	0	3prime_fragment	FALSE	canonical	3	143	junction_5	15.1340675299141	2103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTTGTTGTGAGAATTT	2	True	NA	-9	True	AATAAA	-22	NA	52994261	52977947	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_52978593_52982573_52982706_52984463_52984606_52985450_52985584_52987356_52987409_52994156
H1_mix_00076786	chr6	-	6169	15	NNC	ENSG00000112144.16	novel	6146	14	NA	NA	0	511	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14.6463410489599	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAAGCAGGTGGAAACAG	-19	True	NA	NA	False	NA	NA	NA	53061824	53000767	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_53000796_53001307_53005304_53006314_53006438_53009438_53009568_53011768_53011918_53012036_53012228_53013661_53013983_53016082_53016251_53018329_53018502_53019226_53019360_53031064_53031145_53032532_53032655_53037938_53037994_53041135_53041409_53061595
H1_mix_00076787	chr6	-	2875	7	FSM	ENSG00000012660.14	ENST00000542638.5	2875	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	323.261890732576	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCATTTTACATTTTTTG	NA	False	NA	-10	True	ATTAAA	-20	NA	53349179	53267397	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_53269271_53270592_53270728_53275089_53275262_53276178_53276257_53291775_53291964_53295641_53295708_53348816
H1_mix_00076793	chr6	-	4233	30	NNC	ENSG00000124749.17	novel	4173	30	NA	NA	-60	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	5.7855040467457	497	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAATGTCTTTTTTTATA	NA	False	NA	NA	False	AATAAA	-18	NA	56247640	56056589	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_56057845_56059164_56059243_56060017_56060219_56060740_56060796_56060890_56061038_56061648_56061682_56064577_56064623_56067294_56067331_56069045_56069118_56070744_56070799_56074231_56074286_56075478_56075533_56077528_56077574_56101471_56101526_56124061_56124116_56124238_56124291_56125564_56125621_56126095_56126150_56141784_56141839_56141929_56141984_56156886_56156950_56164422_56164507_56164813_56164823_56166905_56166984_56168123_56168298_56170648_56170866_56170959_56171129_56179577_56180130_56182530_56182657_56247386
H1_mix_00076796	chr6	-	15513	63	NIC	ENSG00000151914.22	novel	24709	104	NA	NA	-7185	57	combination_of_known_junctions	FALSE	canonical	1	2	junction_60	75.6259759700012	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGATATATGTTTACTAAG	9554	False	NA	NA	False	AATAAA	-10	NA	56605698	56457929	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_56459268_56460130_56460255_56463045_56463157_56463564_56463765_56466077_56466196_56469882_56469958_56470127_56470283_56471105_56471269_56472058_56472223_56473872_56474003_56476148_56476338_56477344_56477489_56482049_56482179_56482682_56482878_56485311_56485472_56487103_56487274_56489489_56489610_56492226_56492434_56492933_56493090_56494009_56494181_56497378_56497508_56497855_56498054_56501079_56501236_56501519_56501694_56503996_56504099_56506442_56506545_56506666_56506790_56508528_56508756_56509641_56509874_56511196_56511401_56515449_56515669_56517197_56517306_56517500_56517621_56526360_56526568_56527492_56527735_56528840_56528926_56529447_56529775_56529973_56530134_56532343_56532511_56535121_56535293_56536778_56536941_56552183_56553656_56555344_56555841_56557318_56557519_56560293_56560424_56561307_56561550_56562137_56562201_56568468_56568596_56569855_56570013_56572099_56572267_56572746_56573065_56573678_56573888_56578813_56578938_56592181_56592359_56593662_56594194_56597739_56598007_56598475_56598710_56600068_56600222_56601442_56601677_56602881_56603032_56603204_56603421_56603563_56603714_56603836
H1_mix_00076798	chr6	-	7504	2	ISM	ENSG00000151914.22	ENST00000370765.11	8971	24	20322	-100	5451	100	3prime_fragment	FALSE	canonical	3	16	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAACTGTCAGAAGTCACT	8718	False	NA	94	True	NA	NA	NA	56622567	56614496	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_56617419_56617985
H1_mix_00076802	chr6	-	288	1	FSM	ENSG00000272541.1	ENST00000607119.1	578	1	38	252	38	-252	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGACAATTATGAAAAGTG	NA	False	NA	NA	False	NA	NA	NA	57856430	57856142	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_57856100_57856400
H1_mix_00076803	chr6	-	6649	15	NNC	ENSG00000112232.10	novel	2403	10	NA	NA	19	49499	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	71.923747887635	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAAACCTTCAGTGGTTG	-10	True	NA	NA	False	AATACA	-22	NA	62286206	61630461	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_61630502_61652254_61652318_61659116_61659151_61661281_61661365_61678886_61678948_61679500_61681061_61697194_61700778_61707329_61707404_61732681_61732765_61894634_61894834_61901243_61901372_61978065_61978213_62047877_62047995_62177184_62177313_62285857
H1_mix_00076804	chr6	-	5886	16	NNC	ENSG00000112232.10	novel	2403	10	NA	NA	19	49499	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_7	72.8537042450294	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAAACCTTCAGTGGTTG	-10	True	NA	NA	False	AATACA	-22	NA	62286206	61630461	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_61630502_61652254_61652318_61659116_61659151_61661281_61661365_61678886_61678948_61679500_61681061_61697194_61697254_61698016_61700778_61707329_61707404_61732681_61732765_61894634_61894834_61901243_61901372_61978065_61978213_62047877_62047995_62177184_62177313_62285857
H1_mix_00076805	chr6	-	764	3	NNC	ENSG00000112232.10	novel	2403	10	NA	NA	76	-472008	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	86	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATAGCTATTAAGATATGG	47	False	NA	NA	False	AATAAA	-13	NA	62286149	62151968	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_62152313_62177184_62177313_62285857
H1_mix_00076806	chr6	-	1358	1	FSM	ENSG00000266680.1	ENST00000584934.1	1404	1	9	37	9	-37	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTCCCTTTACAAATAAA	1198	False	NA	NA	False	ATTAAA	-29	NA	63572399	63571041	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_63571000_63572400
H1_mix_00076807	chr6	-	294	1	FSM	ENSG00000213309.3	ENST00000439124.1	535	1	203	38	203	-38	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTGAAAAAGGAACTGGT	NA	False	NA	NA	False	AAAAAG	-35	NA	63616158	63615864	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_63615900_63616200
H1_mix_00076808	chr6	-	4240	26	FSM	ENSG00000112280.18	ENST00000683602.1	4339	26	100	-1	100	0	multi-exon	FALSE	canonical	3	133	junction_5	12.0481699855206	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTAAACATTACTTAACTA	9475	False	NA	-30	True	TATAAA	-44	NA	70273790	70216059	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_70217082_70225931_70226010_70232582_70232772_70234538_70234594_70234793_70234941_70239253_70239287_70240688_70240734_70241418_70241455_70241963_70242036_70242661_70242716_70252119_70252174_70252261_70252316_70253384_70253430_70254475_70254530_70254962_70255017_70255149_70255204_70255336_70255391_70256767_70256822_70260656_70260711_70263243_70263298_70266716_70266771_70268803_70268861_70269632_70269666_70270313_70270368_70271654_70271709_70272064
H1_mix_00076809	chr6	-	2861	32	FSM	ENSG00000112280.18	ENST00000684176.1	2849	32	0	-12	0	0	multi-exon	FALSE	canonical	2	3	junction_31	28.4183845171395	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATATGGTTTCTTAATC	225	False	NA	-26	True	TTTAAA	-38	NA	70283040	70216143	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_70217082_70225931_70226010_70232582_70232772_70234538_70234594_70234793_70234941_70239253_70239287_70240688_70240734_70241418_70241455_70241963_70242036_70242661_70242716_70252119_70252174_70252261_70252316_70253384_70253430_70254475_70254530_70254962_70255017_70255149_70255204_70255336_70255391_70256767_70256822_70260656_70260711_70263243_70263298_70266716_70266771_70268803_70268861_70269632_70269666_70270313_70270368_70271654_70271709_70272064_70272089_70274046_70274083_70274718_70274773_70280811_70280875_70281003_70281040_70281389_70281465_70282897
H1_mix_00076812	chr6	-	1340	1	FSM	ENSG00000232389.1	ENST00000454078.1	1101	1	-32	-207	-32	207	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTTAGACAGCACAGCGAA	NA	False	NA	NA	False	NA	NA	NA	70609366	70608026	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_70608000_70609400
H1_mix_00076813	chr6	-	3985	1	FSM	ENSG00000279289.1	ENST00000624429.1	3978	1	-25	18	-25	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGCCAAAAAAAAAAAAAACT	NA	False	NA	NA	False	AAAACA	-23	NA	71390854	71386869	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_71386900_71390900
H1_mix_00076814	chr6	-	3511	8	FSM	ENSG00000156508.19	ENST00000610520.5	3503	8	0	-8	0	8	multi-exon	FALSE	canonical	0	0	junction_6	7888.09780489516	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATTTCTTTTAACAGTTA	15	True	NA	2	True	AATAAA	-26	NA	73521032	73515741	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519891_73520057_73520999
H1_mix_00076815	chr6	-	2177	7	FSM	ENSG00000156508.19	ENST00000490569.6	2177	7	0	0	0	0	multi-exon	FALSE	canonical	3	15498	junction_6	2648.26224469305	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTTCCTTTGGTCA	5547	False	NA	-5	True	ATTAAA	-17	NA	73521373	73517514	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73517935_73518029_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73520999
H1_mix_00076816	chr6	-	1849	7	FSM	ENSG00000156508.19	ENST00000495333.6	1849	7	0	0	0	0	multi-exon	FALSE	canonical	3	15498	junction_6	3055.07144851893	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAACCTGTGTGTTCCTT	15	True	NA	-11	True	ATTAAA	-11	NA	73521032	73517520	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519517_73519882_73520057_73520999
H1_mix_00076818	chr6	-	2099	5	FSM	ENSG00000156508.19	ENST00000677062.1	2099	5	0	0	0	0	multi-exon	FALSE	canonical	3	19283	junction_4	710.32963298739	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCCAGGCCAAATAAGCGC	5928	False	NA	NA	False	NA	NA	NA	73520992	73518249	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882
H1_mix_00076820	chr6	-	4456	9	NNC	ENSG00000112697.17	novel	4418	7	NA	NA	0	30591	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	361.643967701661	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGGAAATGTCCTTGCTA	-26	True	NA	NA	False	NA	NA	NA	75284792	75222332	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_75222349_75226875_75226898_75252923_75256296_75258779_75258987_75259346_75259491_75260823_75260912_75265230_75265339_75267640_75267749_75284401
H1_mix_00076821	chr6	-	486	4	FSM	ENSG00000112695.13	ENST00000509698.6	486	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	3113.95464892403	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTCTGATTTTATCACT	-8	True	NA	-22	True	AATAAA	-16	NA	75243801	75237786	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_75237989_75240276_75240386_75241175_75241266_75243716
H1_mix_00076823	chr6	-	4417	9	FSM	ENSG00000135338.14	ENST00000392959.5	4719	9	298	4	298	-4	multi-exon	FALSE	canonical	1	2	junction_8	8.47053717304871	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTATGACTCTTTATTT	347	False	NA	-4	True	AATAAA	-10	NA	79537132	79484994	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_79487867_79489083_79489217_79491587_79491731_79492550_79492648_79493612_79493751_79513211_79513742_79518704_79519086_79525163_79525270_79537115
H1_mix_00076824	chr6	-	1487	3	FSM	ENSG00000226453.3	ENST00000668266.1	1606	3	119	0	92	0	multi-exon	FALSE	canonical	0	0	junction_1	0	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAGTCAAGCTAACAAATT	NA	False	NA	NA	False	AAAAAG	-19	NA	82101673	81844603	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_81845910_82057938_82058006_82101559
H1_mix_00076827	chr6	-	1334	11	FSM	ENSG00000118420.17	ENST00000430071.6	1352	11	18	0	2	0	multi-exon	FALSE	canonical	2	3	junction_7	46.2086571975425	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTATTAGAGCTGGGCAT	-13	True	NA	NA	False	NA	NA	NA	83065821	82893024	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_82893043_82957311_82957451_83018972_83019137_83022452_83022562_83023968_83024039_83038415_83038486_83044427_83044660_83049708_83049773_83054147_83054239_83057825_83058023_83065641
H1_mix_00076828	chr6	-	2325	11	FSM	ENSG00000013375.16	ENST00000616566.5	2325	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	166.777366569928	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTTACATACAAAAAAGGAA	16	True	NA	-34	True	ATTAAA	-20	NA	83193234	83168266	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_83169324_83170304_83170479_83174373_83174488_83175961_83176061_83178672_83178757_83179809_83179968_83181735_83181932_83182844_83182979_83187007_83187076_83188613_83188799_83193178
H1_mix_00076830	chr6	-	1545	10	FSM	ENSG00000013375.16	ENST00000652222.1	1544	10	0	-1	0	0	multi-exon	FALSE	canonical	3	12	junction_4	136.930729536354	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTACAGTTTTATGTGGG	5227	False	NA	-75	True	NA	NA	NA	83188756	83168972	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_83169324_83170304_83170479_83171936_83172060_83174373_83174488_83178672_83178757_83179809_83179968_83181735_83181932_83182844_83182979_83187007_83187076_83188613
H1_mix_00076836	chr6	-	241	1	FSM	ENSG00000226309.1	ENST00000442896.1	1219	1	219	759	219	-759	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGACAGTCAACCCAAACA	NA	False	NA	NA	False	CATAAA	-32	NA	84430583	84430342	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_84430300_84430600
H1_mix_00076841	chr6	-	3432	29	FSM	ENSG00000135317.14	ENST00000684118.1	3427	29	0	-5	0	0	multi-exon	FALSE	canonical	2	3	junction_2	67.7201907461421	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCCTATATGAGTTTTTAA	8165	False	NA	NA	False	AATAAA	-2	NA	85593901	85505522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85506006_85507232_85507257_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572372_85574257_85574379_85593578
H1_mix_00076844	chr6	-	6044	10	FSM	ENSG00000135316.19	ENST00000677481.1	6044	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	439.813961792545	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTAGGATCTCCAGGA	3	True	NA	-27	True	AATAAA	-17	NA	85642890	85608334	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85612924_85614980_85615348_85622481_85622688_85623976_85624113_85636966_85637144_85637268_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85642796
H1_mix_00076845	chr6	-	6336	12	FSM	ENSG00000135316.19	ENST00000677771.1	6336	12	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	386.788707348381	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTAGGATCTCCAGGA	6	True	NA	-27	True	AATAAA	-17	NA	85643840	85608334	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85612921_85614980_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85643749
H1_mix_00076849	chr6	-	1823	10	FSM	ENSG00000135316.19	ENST00000678589.1	1823	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	447.423488182927	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGATAGGTTGATCAGAAA	-19	True	NA	NA	False	NA	NA	NA	85642972	85614727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85615348_85618817_85618940_85619267_85619418_85622586_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85642796
H1_mix_00076850	chr6	-	5691	3	FSM	ENSG00000203875.13	ENST00000656092.1	5764	3	0	73	0	-73	multi-exon	FALSE	canonical	3	3280	junction_1	534	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGAGATGGGAGGATTG	509	False	NA	NA	False	NA	NA	NA	85678748	85672722	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85677192_85677423_85678033_85678135
H1_mix_00076853	chr6	-	454	6	FSM	ENSG00000203875.13	ENST00000414002.6	451	6	0	-3	0	0	multi-exon	FALSE	canonical	3	31	junction_2	1517.40823775278	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCTTTTTGTTATTACT	509	False	NA	-12	True	AATAAA	-19	NA	85678748	85677078	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85677192_85677423_85677493_85677790_85677876_85677953_85678033_85678135_85678189_85678693
H1_mix_00076854	chr6	-	1848	1	FSM	ENSG00000272008.1	ENST00000606274.1	4127	1	2372	-93	2372	93	mono-exon	FALSE	NA	NA	NA	NA	NA	191	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAACTTCTGTCTCCCG	3155	False	NA	NA	False	NA	NA	NA	87152913	87151065	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_87151100_87152900
H1_mix_00076855	chr6	-	2314	21	NIC	ENSG00000146282.19	novel	2339	21	NA	NA	0	10	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	205.735868287472	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATCAATTTTCTTGTAAT	-8	True	NA	-2	True	AATAAA	-21	NA	87589987	87513742	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_87514309_87514427_87514500_87514956_87515021_87516805_87516881_87518168_87518265_87518629_87518740_87518823_87518892_87519582_87519708_87520179_87520253_87521463_87521525_87524556_87524653_87529541_87529649_87530783_87530943_87541917_87541995_87545615_87545700_87548590_87548647_87555407_87555506_87562701_87562786_87564129_87564233_87569516_87569591_87589921
H1_mix_00076856	chr6	-	346	4	ISM	ENSG00000146282.19	ENST00000451155.2	2148	22	73032	-4	5433	4	3prime_fragment	FALSE	canonical	0	0	junction_2	365.813552995998	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATGGCTTTTAAAATG	NA	False	NA	-47	True	AATGAA	-41	NA	87516880	87514406	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_87514500_87514956_87515021_87515832_87515947_87516805
H1_mix_00076857	chr6	-	1928	6	NNC	ENSG00000135334.9	novel	1898	5	NA	NA	0	30781	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	198.126626176292	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTCAGCCATCTGTATC	24	True	NA	NA	False	AAAAAG	-1	NA	87702233	87644078	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_87644112_87674862_87675608_87675859_87675932_87677817_87677968_87681619_87681764_87701449
H1_mix_00076858	chr6	-	1725	15	FSM	ENSG00000111880.16	ENST00000369475.7	1725	15	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	60.6684280599498	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGCCTGTGACTTGAGG	196	False	NA	NA	False	NA	NA	NA	88963409	88612718	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_88612883_88614271_88614396_88678352_88678420_88769773_88769875_88844356_88844522_88849754_88849827_88853628_88853765_88890494_88890597_88891805_88891916_88904714_88904956_88906364_88906441_88928984_88929074_88929163_88929268_88941070_88941181_88963345
H1_mix_00076859	chr6	-	1974	14	FSM	ENSG00000111880.16	ENST00000627296.1	2017	14	0	43	0	-43	multi-exon	FALSE	canonical	3	188	junction_2	25.2977534844687	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGCCTGGGTGACAGAGT	44	False	NA	NA	False	NA	NA	NA	88963561	88678036	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_88678420_88769773_88769875_88801563_88801633_88844356_88844522_88849754_88849827_88853628_88853765_88890494_88890597_88891805_88891916_88904714_88904956_88906364_88906441_88928984_88929074_88929163_88929268_88941070_88941181_88963345
H1_mix_00076863	chr6	-	1221	1	ISM	ENSG00000112159.12	ENST00000369393.8	18485	102	175799	277	198	0	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGACTCTTCTTAATGG	NA	False	NA	-1	True	ATTAAA	-26	NA	89643995	89642774	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_89642800_89644000
H1_mix_00076864	chr6	-	19711	98	NNC	ENSG00000112159.12	novel	18485	102	NA	NA	23413	0	intron_retention	FALSE	non_canonical	0	0	junction_62	129.830064621675	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGACTCTTCTTAATGG	NA	False	NA	-1	True	ATTAAA	-26	NA	89796305	89642774	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_89644194_89645014_89645158_89646539_89646604_89648031_89648147_89648255_89648330_89650023_89650199_89650731_89650848_89652191_89652282_89652991_89653156_89654163_89654335_89655763_89655969_89656699_89656802_89658208_89658371_89658609_89658918_89661430_89661579_89662086_89662240_89662791_89662968_89664486_89664629_89668013_89668152_89670918_89671081_89672199_89672364_89672546_89672703_89673235_89673463_89674103_89674590_89675463_89675580_89676101_89676208_89677569_89677697_89678598_89678746_89680588_89680752_89683131_89683331_89683830_89683905_89684875_89684986_89685826_89685974_89686901_89687024_89687343_89687439_89688077_89688174_89688572_89688809_89689869_89690144_89690672_89690835_89692442_89693149_89694073_89694184_89695604_89695993_89696359_89696575_89698864_89699036_89699600_89699728_89700062_89700295_89700645_89700857_89701557_89701679_89701903_89702062_89706058_89706193_89707360_89707477_89708495_89708629_89710680_89710795_89712035_89712257_89712574_89712787_89713147_89713297_89714542_89714752_89715652_89715770_89716649_89716810_89718365_89718628_89718766_89719031_89719135_89719228_89722955_89723144_89723511_89723620_89725198_89725397_89727832_89727956_89728930_89729140_89730725_89730924_89732556_89732776_89738325_89738456_89740233_89740379_89743149_89743281_89743575_89743715_89745272_89745412_89745491_89745627_89747328_89747471_89749222_89749370_89749542_89749752_89750353_89750533_89751430_89751583_89753511_89753623_89754082_89754231_89756276_89756391_89758254_89758352_89758815_89758961_89761644_89761749_89762318_89762531_89771560_89771622_89772572_89772722_89774620_89774734_89776599_89776696_89780211_89780294_89781398_89781593_89785011_89785127_89787853_89787958_89789779_89789912_89790158_89790402_89793761
H1_mix_00076867	chr6	-	1921	3	FSM	ENSG00000135333.15	ENST00000369297.1	1885	3	0	-36	0	36	multi-exon	FALSE	canonical	3	22	junction_2	3	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTAAAAATAACACATATAT	8	True	NA	NA	False	TATAAA	-10	NA	93419547	93409617	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_93411171_93414702_93414768_93419244
H1_mix_00076868	chr6	-	1578	2	Intergenic	novelGene_1293	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	403	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTCATTTTTCTGATTAA	NA	False	NA	-1	True	ATTAAA	-29	NA	93834095	93816269	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_93817014_93833261
H1_mix_00076869	chr6	-	1428	2	Intergenic	novelGene_1295	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	27	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCCCCCATTACTTCAAT	NA	False	NA	NA	False	NA	NA	NA	93835591	93832433	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_93833421_93835150
H1_mix_00076870	chr6	-	6018	2	FSM	ENSG00000112218.9	ENST00000229955.4	5967	2	-52	1	-52	-1	multi-exon	FALSE	canonical	3	40	junction_1	0	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAAGTGGAGTTTTTTTTA	-1	True	NA	-2	True	AATAAA	-17	NA	96837529	96794125	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_96799882_96837267
H1_mix_00076872	chr6	-	3061	14	FSM	ENSG00000146263.12	ENST00000509383.5	3083	14	0	22	0	-22	multi-exon	FALSE	canonical	2	4	junction_13	35.0217176914436	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCTACTAAAAAAAAAAAAAA	4	True	NA	NA	False	NA	NA	NA	97283188	97230290	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_97231653_97233860_97233981_97246627_97246691_97254556_97254734_97263334_97263449_97267871_97268003_97269901_97269993_97270106_97270284_97272703_97272882_97272974_97273063_97278848_97278899_97281236_97281363_97282313_97282554_97283044
H1_mix_00076873	chr6	-	4739	10	NNC	ENSG00000146263.12	novel	5907	7	NA	NA	0	61	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_9	31.9714378704833	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGAAGCACATTATGTTG	4	True	NA	57	True	NA	NA	NA	97283188	97258601	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_97262179_97263334_97263449_97267871_97268003_97269901_97269993_97272703_97272882_97272974_97273063_97278848_97278899_97281236_97281363_97282313_97282554_97283044
H1_mix_00076875	chr6	-	2035	2	Antisense	novelGene_ENSG00000271860.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAGTTATTTTCAGTTTA	NA	False	NA	NA	False	ATTAAA	-12	NA	97781419	97773913	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr6_-_97775730_97781200
H1_mix_00076876	chr6	-	336	2	Antisense	novelGene_ENSG00000271860.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	116	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCCATCTGGGCGTATACT	NA	False	NA	NA	False	NA	NA	NA	97785280	97779566	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr6_-_97779613_97784990
H1_mix_00076879	chr6	-	1344	8	NIC	ENSG00000132423.12	novel	1325	7	NA	NA	34	-63	combination_of_known_junctions	FALSE	canonical	3	27	junction_6	117.427007288853	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTGTTATTTCGTCTAA	8601	False	NA	-8	True	AATAAA	-24	NA	99394157	99369466	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_99369821_99371427_99371588_99375939_99376183_99377385_99377486_99380188_99380342_99383007_99383131_99383697_99383825_99394073
H1_mix_00076880	chr6	-	5025	12	FSM	ENSG00000132424.17	ENST00000679525.1	5025	12	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_7	220.896146272443	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGCCCCAAAATATAAATAAA	-21	True	NA	-37	True	AATAAA	-38	NA	99425315	99398086	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_99401631_99402539_99402711_99403828_99403883_99404602_99404703_99406030_99406169_99408080_99408272_99409172_99409287_99410740_99410965_99412550_99412740_99414571_99414691_99416348_99416429_99425214
H1_mix_00076884	chr6	-	1027	5	FSM	ENSG00000132424.17	ENST00000498075.1	1027	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	322.481782431194	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGAGGTGGGAGGATTGC	24	True	NA	NA	False	NA	NA	NA	99425270	99411735	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_99412319_99412550_99412740_99414571_99414691_99416348_99416429_99425214
H1_mix_00076886	chr6	-	6255	18	FSM	ENSG00000123552.18	ENST00000327681.10	6255	18	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_17	43.6715485442082	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGATTGGTCCTGGAATTT	52	False	NA	-15	True	AATAAA	-23	NA	99515376	99432438	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_99435847_99437245_99437400_99439768_99439856_99443564_99443663_99445796_99446464_99464603_99464748_99465079_99465137_99466671_99466764_99468536_99468619_99476142_99476231_99482752_99482884_99488199_99488296_99488680_99488821_99503764_99503866_99507427_99507532_99508609_99508783_99510120_99510231_99514853
H1_mix_00076891	chr6	-	1617	8	FSM	ENSG00000123552.18	ENST00000472914.6	1617	8	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_7	47.5136929780054	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTGAAAAGCTGAGAATCA	52	False	NA	NA	False	ATTAAA	-16	NA	99515376	99482513	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_99482884_99488199_99488296_99488680_99488821_99503764_99503866_99507427_99507532_99508609_99508783_99510120_99510231_99514853
H1_mix_00076892	chr6	-	2501	12	FSM	ENSG00000112237.13	ENST00000369220.8	2118	12	0	-383	0	383	multi-exon	FALSE	canonical	3	64	junction_4	392.437435135676	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAGTAAAGTAAGGAACCT	5	True	NA	NA	False	TTTAAA	-12	NA	99568628	99542003	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_99543610_99545111_99545231_99546394_99546475_99549507_99549573_99550217_99550310_99550992_99551029_99551839_99551896_99558496_99558549_99561366_99561437_99561596_99561682_99562841_99562949_99568495
H1_mix_00076897	chr6	-	674	8	FSM	ENSG00000112237.13	ENST00000369217.8	674	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	635.82621807522	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAAGTAAATCTTCTGTGA	10	True	NA	NA	False	TTTAAA	-39	NA	99568623	99550993	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_99551029_99551839_99551896_99558496_99558549_99561366_99561437_99561596_99561682_99562841_99562949_99566897_99567039_99568495
H1_mix_00076898	chr6	-	4452	5	FSM	ENSG00000112237.13	ENST00000482541.2	1704	5	0	-2748	0	2748	multi-exon	FALSE	canonical	3	1361	junction_1	63.7828346814407	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGAGACATGTCTTCCAT	5	True	NA	NA	False	AATAAA	-7	NA	99568628	99554491	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_99558549_99561366_99561437_99561596_99561682_99562841_99562949_99568495
H1_mix_00076901	chr6	-	5261	13	FSM	ENSG00000085382.12	ENST00000369127.8	5318	13	58	-1	58	0	multi-exon	FALSE	canonical	3	108	junction_12	15.5158968659744	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTGGCTTATGTCTGT	NA	False	NA	-1	True	AATAAA	-16	NA	104787356	104728093	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_104729765_104730302_104730417_104744159_104744231_104744511_104744611_104750340_104750473_104771192_104771390_104771924_104772075_104776740_104776829_104777012_104777111_104777205_104777318_104784085_104784174_104784416_104784486_104784984
H1_mix_00076904	chr6	-	760	2	FSM	ENSG00000203809.7	ENST00000659952.1	760	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATTGTATCTATTGAGC	995	False	NA	NA	False	AATAAA	-20	NA	104940374	104936119	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_104936683_104940177
H1_mix_00076909	chr6	-	3978	3	FSM	ENSG00000272398.6	ENST00000621311.1	257	3	-165	-3556	0	0	multi-exon	FALSE	canonical	2	8	junction_1	137.5	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCATTTTAAGTTTTTC	2	True	NA	-21	True	AATAAA	-22	NA	106975327	106969830	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_106973438_106974577_106974755_106975133
H1_mix_00076910	chr6	-	2435	2	FSM	ENSG00000272398.6	ENST00000619869.1	566	2	-340	-1529	-172	0	multi-exon	FALSE	canonical	3	379	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCATTTTAAGTTTTTC	-1	True	NA	-21	True	AATAAA	-22	NA	106975799	106969830	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_106971835_106975368
H1_mix_00076914	chr6	-	709	4	FSM	ENSG00000025796.14	ENST00000473746.1	709	4	0	0	0	0	multi-exon	FALSE	canonical	3	521	junction_2	45.2621990922521	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCTGGAAATTATCAGTAT	NA	False	NA	NA	False	NA	NA	NA	107883467	107872884	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_107872913_107876563_107876663_107881148_107881251_107882987
H1_mix_00076917	chr6	-	799	1	FSM	ENSG00000225093.1	ENST00000417878.1	1212	1	454	-41	454	41	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATTTTCCACTGGGAAAA	480	False	NA	NA	False	AATAAA	-2	NA	108005114	108004315	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_108004300_108005100
H1_mix_00076919	chr6	-	3851	7	Fusion	ENSG00000271734.1_ENSG00000081087.15	novel	4471	6	NA	NA	6	-107	multi-exon	FALSE	canonical	2	7	junction_1	88.0178327890939	88	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAGGACTCTATCTCCTT	0	True	NA	NA	False	NA	NA	NA	108074735	108030355	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr6_-_108030900_108042566_108044841_108049252_108049419_108051030_108051199_108054489_108054588_108064184_108064300_108074249
H1_mix_00076921	chr6	-	1072	3	FSM	ENSG00000112335.15	ENST00000426155.6	1072	3	0	0	0	0	multi-exon	FALSE	canonical	2	36	junction_2	396.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTGTGTTGCCTCCAGC	55	False	NA	-5	True	AATAAA	-26	NA	108260964	108211512	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_108212255_108214497_108214623_108260759
H1_mix_00076922	chr6	-	890	4	FSM	ENSG00000112335.15	ENST00000349379.5	890	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	400.841614606069	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCAGTTGACAAGAAGTTA	NA	False	NA	NA	False	NA	NA	NA	108261244	108212004	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_108212255_108214497_108214623_108222949_108223046_108260825
H1_mix_00076924	chr6	-	5092	2	FSM	ENSG00000135535.17	ENST00000415861.2	4963	2	-129	0	-129	0	multi-exon	FALSE	canonical	3	877	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGTTACTGCGTTTTG	9919	False	NA	-1	True	AATAAA	-22	NA	109372998	109366513	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_109369018_109370410
H1_mix_00076926	chr6	-	964	6	FSM	ENSG00000135535.17	ENST00000512821.5	964	6	0	0	0	0	multi-exon	TRUE	canonical	2	17	junction_1	361.650991979837	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGATATACATTATTTTAG	-3	True	NA	NA	False	NA	NA	NA	109382410	109367820	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_109368326_109370410_109370468_109376073_109376113_109377899_109377972_109379578_109379663_109382203
H1_mix_00076927	chr6	-	3792	7	FSM	ENSG00000185250.16	ENST00000424445.6	4031	7	0	239	0	-239	multi-exon	FALSE	canonical	2	9	junction_6	7.6955975870768	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTTAAGAATGTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	109441171	109390454	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_109392938_109400034_109400171_109419186_109419244_109426846_109426995_109427093_109427157_109431156_109431346_109440455
H1_mix_00076928	chr6	-	2014	16	ISM	ENSG00000135596.18	ENST00000358577.7	3142	24	5971	0	12	0	3prime_fragment	FALSE	canonical	3	167	junction_14	37.6683775422657	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCGTTCACACCGCCTACA	6616	False	NA	-4	True	ATTAAA	-17	NA	109449771	109444061	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_109444340_109444724_109444799_109444895_109444996_109445196_109445291_109445415_109445530_109445770_109445863_109446135_109446413_109446695_109446773_109447072_109447230_109447356_109447441_109447680_109447723_109447874_109447964_109448202_109448394_109448731_109448880_109449399_109449482_109449656
H1_mix_00076929	chr6	-	4384	9	FSM	ENSG00000135596.18	ENST00000465904.1	4381	9	0	-3	0	0	multi-exon	FALSE	canonical	3	192	junction_8	33.7914097811855	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCGTTCACACCGCCTACA	6134	False	NA	-4	True	ATTAAA	-17	NA	109450253	109444061	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_109444340_109444724_109444799_109444895_109444996_109445196_109445291_109445415_109445530_109445770_109445863_109446135_109446773_109447072_109449784_109449969
H1_mix_00076933	chr6	-	2690	7	NNC	ENSG00000112365.5	novel	5501	7	NA	NA	15	-2839	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_6	34.3608304129377	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTTATTTTTCTTAG	28	False	NA	NA	False	NA	NA	NA	109483204	109465432	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_109466575_109467652_109467735_109475398_109475483_109476174_109476259_109476762_109476931_109481074_109482055_109483054
H1_mix_00076934	chr6	-	1230	2	NNC	ENSG00000112365.5	novel	5501	7	NA	NA	41	-18355	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAGTTAATTTTCTCCAC	3	True	NA	-4	True	AATAAA	-17	NA	109483178	109480948	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_109482055_109483054
H1_mix_00076935	chr6	-	577	5	FSM	ENSG00000155085.16	ENST00000524674.5	577	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	12.3592070943083	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTCCTGTGAATTTAAAAG	NA	False	NA	NA	False	AGTAAA	-12	NA	109662657	109633243	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_109633324_109644613_109644689_109656755_109656885_109659227_109659414_109662550
H1_mix_00076937	chr6	-	2888	11	FSM	ENSG00000112290.13	ENST00000392589.6	2886	11	0	-2	0	2	multi-exon	FALSE	canonical	3	24	junction_9	155.406724436235	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTTGCTCTTTGAATA	-15	True	NA	-2	True	AATAAA	-21	NA	110179670	110099816	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_110100680_110101587_110102217_110103377_110103558_110105406_110105580_110107076_110107195_110108527_110108682_110113325_110113461_110127468_110127630_110160634_110160733_110178597_110178743_110179438
H1_mix_00076938	chr6	-	2817	11	FSM	ENSG00000112290.13	ENST00000392586.5	2815	11	0	-2	0	2	multi-exon	FALSE	canonical	3	20	junction_10	159.651777315506	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTTGCTCTTTGAATA	13	True	NA	-2	True	AATAAA	-21	NA	110180001	110099816	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_110100680_110101587_110102217_110103377_110103558_110105406_110105580_110107076_110107195_110108527_110108682_110113325_110113461_110127468_110127630_110160634_110160733_110178597_110178743_110179840
H1_mix_00076941	chr6	-	604	5	FSM	ENSG00000155111.15	ENST00000463016.1	604	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	4.02336923485777	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTTATTTTCCTTTTTA	593	False	NA	NA	False	NA	NA	NA	110746201	110627001	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_110627146_110632029_110632162_110667433_110667575_110670430_110670542_110746125
H1_mix_00076943	chr6	-	3610	1	FSM	ENSG00000074935.14	ENST00000604689.1	3610	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	8853	False	NA	NA	False	NA	NA	NA	112078694	112075084	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_112075100_112078700
H1_mix_00076947	chr6	-	339	3	FSM	ENSG00000112769.20	ENST00000521187.1	2725	3	1270	1116	1270	-1116	multi-exon	FALSE	canonical	1	1	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGTCCTGGAGCAGCTGGA	9279	False	NA	NA	False	NA	NA	NA	112178232	112172745	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_112172805_112175312_112175481_112178120
H1_mix_00076951	chr6	-	3308	14	FSM	ENSG00000196591.12	ENST00000519108.5	2000	14	0	-1308	0	1308	multi-exon	FALSE	canonical	2	5	junction_13	854.106959475716	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTAAGTTCTTTAGTGGT	636	False	NA	NA	False	NA	NA	NA	113970724	113939409	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_113941089_113941707_113941766_113943350_113943507_113944279_113944411_113945361_113945471_113946007_113946149_113948978_113949088_113949167_113949261_113953276_113953419_113956012_113956152_113956618_113956694_113958648_113958767_113959905_113960019_113970479
H1_mix_00076953	chr6	-	3032	1	FSM	ENSG00000189241.8	ENST00000368608.4	5073	1	2037	4	1994	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCCTCCTGAAGCTTCT	2065	False	NA	NA	False	ATTAAA	-12	NA	116277893	116274861	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_116274900_116277900
H1_mix_00076955	chr6	-	4597	9	FSM	ENSG00000047932.14	ENST00000368498.7	4597	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	68.669384553817	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGGCTTGTTATTTAT	-24	True	NA	-3	True	AATAAA	-24	NA	117602511	117560268	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_117563385_117566853_117567035_117569571_117569737_117570859_117570956_117573466_117573633_117575176_117575353_117577447_117577472_117578899_117579065_117602003
H1_mix_00076958	chr6	-	2501	8	ISM	ENSG00000111877.18	ENST00000619706.5	5219	14	4	97258	4	-116	5prime_fragment	FALSE	canonical	3	32	junction_6	10.40211909337	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACTAGGCAAGAATATATAA	3	True	NA	NA	False	NA	NA	NA	118935155	118910712	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_118911770_118913294_118913421_118917560_118917762_118922004_118922087_118923810_118924128_118931419_118931739_118932606_118932741_118934890
H1_mix_00076959	chr6	-	2521	2	FSM	ENSG00000111879.20	ENST00000482219.6	2515	2	0	-6	0	5	multi-exon	FALSE	canonical	3	162	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATTTTTTTCTACGTT	NA	False	NA	5	True	AATAAA	-23	NA	118963920	118959823	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_118960185_118961760
H1_mix_00076963	chr6	-	5244	33	FSM	ENSG00000146350.14	ENST00000275159.10	4431	33	0	-813	0	70	multi-exon	TRUE	non_canonical	2	8	junction_3	4.7810457472712	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAACTGGTACTATACAG	-4	True	NA	70	True	ACTAAA	-42	NA	121334430	121079423	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_121080891_121090852_121091042_121106022_121106164_121112504_121112660_121113061_121113178_121115171_121115242_121126377_121126462_121131626_121131753_121160009_121160104_121160947_121161057_121170404_121170528_121205074_121205164_121223235_121223353_121239069_121239189_121241464_121241553_121242200_121242340_121255327_121255411_121256083_121256286_121279120_121279246_121281543_121281687_121283817_121283911_121292052_121292194_121294569_121294661_121299445_121299506_121303616_121303762_121304364_121304427_121304521_121304626_121304754_121304834_121307975_121308102_121310778_121310848_121317494_121317673_121321632_121321795_121334275
H1_mix_00076964	chr6	-	1264	9	NIC	ENSG00000146350.14	novel	5323	36	NA	NA	20213	300	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_8	6.14410286372225	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTAGCTTACTTTTAGTTC	NA	False	NA	NA	False	NA	NA	NA	121139824	121080558	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_121080891_121090852_121091042_121106022_121106164_121112504_121112660_121113061_121113178_121115171_121115242_121126377_121126462_121131626_121131753_121139773
H1_mix_00076966	chr6	-	1046	2	Intergenic	novelGene_1310	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	0	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCCATTATTCTCTTCTA	3374	False	NA	NA	False	NA	NA	NA	121625787	121622947	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_121623911_121625704
H1_mix_00076969	chr6	-	379	1	FSM	ENSG00000232362.1	ENST00000440646.1	311	1	30	-98	30	98	mono-exon	FALSE	NA	NA	NA	NA	NA	256	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATTAAAAAAAAAAATTTC	NA	False	NA	NA	False	ATTAAA	-13	NA	122859958	122859579	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_122859600_122860000
H1_mix_00076973	chr6	-	1040	3	NNC	ENSG00000186439.14	novel	4627	41	NA	NA	49199	-40842	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	148.5	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAATTACCCAGTCTTAA	NA	False	NA	NA	False	ATTAAA	-12	NA	123587710	123569555	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_123570134_123570922_123571133_123587458
H1_mix_00076975	chr6	-	484	5	FSM	ENSG00000237742.8	ENST00000427852.6	475	5	0	-9	0	-4	multi-exon	FALSE	canonical	1	4	junction_3	15.0228991875736	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTTATCACATATCTTC	593	False	NA	-1	True	AATAAA	-21	NA	125745028	125578557	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_125578726_125645633_125645701_125657428_125657467_125720423_125720508_125744901
H1_mix_00076976	chr6	-	3500	2	Antisense	novelGene_ENSG00000224506.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	31	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	NA	False	AATAAA	-22	NA	125707402	125701883	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr6_-_125705147_125707165
H1_mix_00076977	chr6	-	1515	5	FSM	ENSG00000093144.19	ENST00000454591.6	1515	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	292.361398785818	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTAGCCATGACATGGAA	-7	True	NA	NA	False	ACTAAA	-3	NA	127343562	127289266	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_127290278_127314815_127314897_127316449_127316503_127327001_127327145_127343335
H1_mix_00076989	chr6	-	2028	13	FSM	ENSG00000164483.17	ENST00000437477.6	2028	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	31.5396575758203	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTATCTTTACACTTAGAT	175	False	NA	-79	True	AATGAA	-11	NA	130222813	130144380	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_130144805_130145339_130145423_130146009_130146182_130154824_130155026_130175840_130176009_130184102_130184188_130184437_130184624_130209494_130209609_130214336_130214527_130215194_130215295_130216570_130216617_130221636_130221776_130222693
H1_mix_00076990	chr6	-	994	7	NNC	ENSG00000164483.17	novel	1877	11	NA	NA	23	-2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_6	27.6023348448802	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGAATTCCTAAATGTTC	7369	False	NA	-15	True	ATTAAA	-20	NA	130215619	130175836	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_130176009_130184102_130184188_130184437_130184624_130209494_130209609_130214336_130214527_130215194_130215295_130215472
H1_mix_00076992	chr6	-	2918	5	FSM	ENSG00000079819.19	ENST00000452150.6	2994	5	76	0	76	0	multi-exon	FALSE	canonical	3	423	junction_3	18.2122898066114	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCACTTCTCTTTTTCT	NA	False	NA	-6	True	AATAAA	-19	NA	130868831	130839346	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_130840599_130858130_130858244_130863637_130863719_130865535_130865635_130867458
H1_mix_00076994	chr6	-	201	1	FSM	ENSG00000218857.1	ENST00000407765.1	1162	1	860	101	860	-101	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCCATATCTGAGCCCCCT	NA	False	NA	NA	False	NA	NA	NA	131184626	131184425	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_131184400_131184600
H1_mix_00076996	chr6	-	431	2	Intergenic	novelGene_1315	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGACACTATAATGGAGG	NA	False	NA	NA	False	NA	NA	NA	131329126	131323303	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_131323412_131328803
H1_mix_00076997	chr6	-	228	2	Intergenic	novelGene_1316	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTTTTAGGGTCTAGGG	NA	False	NA	NA	False	AATAAA	-28	NA	131405040	131340874	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_131340993_131404930
H1_mix_00077000	chr6	-	4463	30	FSM	ENSG00000112282.18	ENST00000368060.7	4446	30	0	-17	0	0	multi-exon	TRUE	canonical	3	32	junction_1	29.4385027794849	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATTGGAATGAGTGTCG	-22	True	NA	-9	True	AATAAA	-20	NA	131628229	131586731	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_131586938_131587708_131587847_131589464_131589597_131590321_131590443_131591312_131591528_131592387_131592461_131593005_131593172_131594098_131594336_131595946_131596164_131596517_131596689_131598286_131598468_131598555_131598762_131600037_131600163_131602217_131602382_131603029_131603205_131604177_131604321_131605239_131605486_131606478_131606625_131607927_131608072_131610045_131610247_131615906_131616003_131618406_131618520_131619826_131619897_131620627_131620730_131621880_131621980_131623350_131623463_131624864_131624990_131627395_131627484_131627640_131627673_131628010
H1_mix_00077002	chr6	-	2434	15	FSM	ENSG00000146409.12	ENST00000650136.1	2421	15	0	-13	0	0	multi-exon	FALSE	canonical	2	6	junction_4	103.52915393398	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTTGGTCTATTTTCA	0	True	NA	-2	True	AATAAA	-21	NA	132798495	132769369	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_132770337_132770889_132770940_132771035_132771130_132772131_132772250_132772992_132773089_132774221_132774314_132776327_132776430_132779267_132779405_132783932_132784090_132787433_132787582_132789763_132789838_132790176_132790273_132790784_132790866_132796981_132797122_132798413
H1_mix_00077003	chr6	-	2486	14	NIC	ENSG00000146409.12	novel	2421	15	NA	NA	3	-6	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	71.202270424541	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCATGCTTCTTGGTCTA	-3	True	NA	-8	True	AATAAA	-15	NA	132798634	132769375	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_132770337_132770889_132770940_132771035_132771130_132772131_132772250_132772992_132773089_132774221_132774314_132776327_132776430_132779267_132779405_132783932_132784090_132787433_132787582_132789763_132789838_132790176_132790273_132796981_132797122_132798413
H1_mix_00077004	chr6	-	5461	2	FSM	ENSG00000118515.12	ENST00000474427.6	5474	2	2	11	0	-3	multi-exon	FALSE	canonical	3	31	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTACATATATTGTGTC	-1	True	NA	-12	True	AATAAA	-11	NA	134174864	134169258	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_134174587_134174731
H1_mix_00077011	chr6	-	4022	4	FSM	ENSG00000135541.22	ENST00000681556.1	5738	4	1476	240	-632	-109	multi-exon	FALSE	canonical	3	15	junction_3	9.89949493661167	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGCTAAGCTCTTGATGT	3305	False	NA	NA	False	AATGAA	-24	NA	135303491	135283871	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_135285648_135290422_135290526_135300499_135300559_135301407
H1_mix_00077012	chr6	-	6063	29	FSM	ENSG00000135541.22	ENST00000265602.11	6063	29	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_26	17.4193110644246	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTTTGTTTTATCTTTA	4	True	NA	NA	False	ATTAAA	-18	NA	135497740	135283531	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_135285648_135290422_135290526_135300499_135300559_135318518_135318617_135323161_135323325_135358131_135358188_135394775_135394897_135404950_135404978_135411347_135411545_135427166_135427308_135428628_135428760_135429881_135430001_135431207_135431315_135433026_135433257_135438374_135438499_135442581_135442715_135447007_135447161_135448289_135448476_135453340_135453437_135455733_135455927_135457493_135457714_135463124_135463307_135465813_135466374_135467580_135467635_135490622_135490748_135492227_135492292_135495813_135495899_135497187_135497250_135497582
H1_mix_00077013	chr6	-	6557	26	FSM	ENSG00000135541.22	ENST00000679742.1	6543	26	0	-14	0	0	multi-exon	FALSE	canonical	2	8	junction_1	19.1122997046405	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCAGCTAATAATTTTGA	6184	False	NA	NA	False	AATAAA	-19	NA	135492237	135283985	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_135285648_135300499_135300559_135301407_135302818_135318518_135318617_135323161_135323325_135358131_135358188_135394775_135394897_135404950_135404978_135411347_135411545_135427166_135427308_135428628_135428760_135429881_135430001_135431207_135431315_135433026_135433257_135438374_135438499_135442581_135442715_135447007_135447161_135448289_135448476_135453340_135453437_135455733_135455927_135457493_135457714_135463124_135463307_135465813_135466374_135467580_135467635_135490622_135490748_135492227
H1_mix_00077014	chr6	-	3638	23	FSM	ENSG00000135541.22	ENST00000327035.10	3638	23	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	16.896439548659	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGAGGCTTTTTTGATTTT	-1	True	NA	1	True	AATAAA	-14	NA	135497745	135387783	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_135388034_135394775_135394897_135404950_135404978_135411347_135411545_135427166_135427308_135428628_135428760_135429881_135430001_135431207_135431315_135433026_135433257_135438374_135438499_135442581_135442715_135447007_135447161_135448289_135448476_135453340_135453437_135455733_135455927_135457493_135457714_135463124_135463307_135465813_135466374_135467580_135467635_135490622_135490748_135492227_135492292_135497187_135497250_135497582
H1_mix_00077016	chr6	-	540	3	FSM	ENSG00000146410.12	ENST00000445767.2	540	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	31.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGTTGGGCAAGGGATCT	-9	True	NA	NA	False	AAGAAA	-44	NA	136250299	136247461	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_136247561_136249036_136249154_136249975
H1_mix_00077017	chr6	-	5640	14	FSM	ENSG00000029363.17	ENST00000527613.5	5640	14	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	283.15003236518	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATAACTGCTGTTGTTTG	17	True	NA	-23	True	AATAAA	-10	NA	136289795	136258592	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_136261116_136261264_136261478_136267028_136267176_136268161_136268340_136269140_136269304_136269436_136269613_136271994_136272080_136273081_136273188_136275531_136275702_136275842_136276509_136277864_136278777_136279762_136279877_136282583_136282688_136289712
H1_mix_00077018	chr6	-	4373	13	FSM	ENSG00000029363.17	ENST00000527759.5	4373	13	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_10	202.846000700038	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGCACCTAGATTACAGCC	17	True	NA	NA	False	NA	NA	NA	136289795	136259690	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_136261116_136261264_136261478_136267028_136267176_136268161_136268340_136269436_136269613_136271994_136272080_136273081_136273188_136275531_136275702_136275842_136276509_136277864_136278771_136279762_136279877_136282583_136282688_136289712
H1_mix_00077025	chr6	-	3356	7	FSM	ENSG00000016402.14	ENST00000316649.10	3486	7	98	32	97	-32	multi-exon	FALSE	canonical	2	4	junction_1	3.07769755210323	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAGCAAAAGAAAAATAAAG	442	False	NA	NA	False	AATAAA	-10	NA	137044867	137000002	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_137002356_137004620_137004761_137008598_137008744_137009316_137009493_137011273_137011453_137016967_137017104_137044640
H1_mix_00077026	chr6	-	2382	7	FSM	ENSG00000027697.15	ENST00000644894.1	2492	7	110	0	2	0	multi-exon	FALSE	canonical	1	1	junction_6	93.4482922975767	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAAAACTCGTTTTTGT	253	False	NA	-15	True	AATAAA	-3	NA	137219134	137197496	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_137198640_137200880_137201009_137203498_137203686_137204331_137204505_137206135_137206309_137206962_137207078_137218671
H1_mix_00077028	chr6	-	1944	4	NNC	ENSG00000112378.12	novel	4198	3	NA	NA	0	45107	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	535.001765313806	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGATGGTACCCAAAGCAA	0	True	NA	NA	False	NA	NA	NA	138107419	138043397	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_138043424_138090784_138092269_138096353_138096495_138107126
H1_mix_00077029	chr6	-	1940	4	NNC	ENSG00000112378.12	novel	4198	3	NA	NA	0	45107	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	535.001765313806	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGATGGTACCCAAAGCAA	0	True	NA	NA	False	NA	NA	NA	138107419	138043397	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_138043425_138090789_138092269_138096353_138096495_138107126
H1_mix_00077031	chr6	-	976	1	FSM	ENSG00000215878.3	ENST00000401037.3	976	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGTGGGCCAGGTGGGT	NA	False	NA	NA	False	NA	NA	NA	138403560	138402584	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_138402600_138403600
H1_mix_00077032	chr6	-	506	4	FSM	ENSG00000135540.12	ENST00000491526.6	506	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	9.7410927974683	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGAAGATGCGACAGCA	622	False	NA	NA	False	NA	NA	NA	138692571	138447064	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_138447194_138473305_138473434_138496218_138496372_138692475
H1_mix_00077034	chr6	-	252	1	FSM	ENSG00000216802.1	ENST00000405630.1	748	1	534	-38	534	38	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCACCATGAGTGAGGCC	5605	False	NA	NA	False	AAAACA	-12	NA	138650439	138650187	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_138650200_138650400
H1_mix_00077035	chr6	-	3935	19	FSM	ENSG00000135597.19	ENST00000367663.8	2607	19	0	-1328	0	-39	multi-exon	FALSE	canonical	3	102	junction_10	73.5866835779409	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGCCTTCCAATAAATAAC	532	False	NA	NA	False	NA	NA	NA	138987775	138903531	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_138905133_138907494_138907601_138908667_138908817_138911275_138911372_138912764_138912951_138914696_138914762_138915857_138915977_138917554_138917628_138920214_138920317_138921036_138921125_138929976_138930099_138941334_138941490_138943512_138943577_138943852_138944016_138944497_138944623_138945218_138945373_138945500_138945698_138947789_138947914_138987529
H1_mix_00077038	chr6	-	2895	20	NIC	ENSG00000135597.19	novel	4533	20	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_11	83.2943916399559	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGGGTAGATTGTGTT	315	False	NA	-12	True	AATAAA	-19	NA	138987992	138904866	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_138905133_138907494_138907601_138908667_138908817_138911275_138911372_138912764_138912951_138914696_138914762_138915857_138915977_138917554_138917628_138920214_138920317_138921036_138921125_138926400_138926479_138929976_138930099_138941334_138941490_138943512_138943577_138943852_138944016_138944497_138944623_138945218_138945373_138945500_138945698_138947789_138947914_138987529
H1_mix_00077043	chr6	-	239	2	Intergenic	novelGene_1318	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGGAAAAGGACTTTCACAA	8653	False	NA	NA	False	NA	NA	NA	142021776	142015872	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_142015975_142021639
H1_mix_00077045	chr6	-	2520	1	ISM	ENSG00000189007.16	ENST00000606514.5	6651	6	16624	2	16624	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	232	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCATGTTTAAAATATTAT	NA	False	NA	-25	True	AATAAA	-21	NA	143425353	143422833	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_143422800_143425400
H1_mix_00077047	chr6	-	1755	8	NNC	ENSG00000001036.14	novel	2385	7	NA	NA	0	39458	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	277.331526354657	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCGTGGTGGCGGGCGCCT	-10	True	NA	NA	False	AATACA	-35	NA	143511720	143455353	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_143455389_143495476_143495848_143497388_143497498_143501931_143502123_143502354_143502566_143503912_143504253_143507236_143507425_143511410
H1_mix_00077053	chr6	-	2433	14	NNC	ENSG00000131013.4	novel	2475	13	NA	NA	13	-67	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	140.458926591269	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATTTTTTTCCTGGCTGC	-5	True	NA	NA	False	NA	NA	NA	149546030	149504561	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_149505705_149512154_149512303_149517353_149517451_149520350_149520389_149521059_149521172_149525142_149525210_149526651_149526777_149533457_149533575_149534677_149534775_149535595_149535739_149540941_149541060_149541366_149541432_149541518_149541587_149545935
H1_mix_00077054	chr6	-	1736	10	NIC	ENSG00000186625.14	novel	1898	11	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	3	11	junction_4	55.3011954863746	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGTTTTACTTTAGCA	-4	True	NA	-11	True	AATAAA	-20	NA	149648714	149594875	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_149595235_149597062_149597190_149597506_149597642_149598223_149598351_149603267_149603374_149604660_149604783_149623102_149623284_149632758_149632917_149638385_149638561_149648468
H1_mix_00077055	chr6	-	468	3	FSM	ENSG00000186625.14	ENST00000481905.5	563	3	0	95	0	-95	multi-exon	FALSE	canonical	3	157	junction_1	4.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACTCATAGTGCTAACCC	NA	False	NA	NA	False	NA	NA	NA	149603373	149598147	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_149598351_149601593_149601753_149603267
H1_mix_00077057	chr6	-	834	6	FSM	ENSG00000120253.14	ENST00000367402.6	882	6	0	48	0	-48	multi-exon	FALSE	canonical	0	0	junction_2	93.4139175926157	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAACTTTTTAATGAATA	3213	False	149746560	NA	False	NA	NA	NA	149746552	149731612	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_149731736_149736470_149736623_149742389_149742571_149743637_149743716_149745939_149746063_149746375
H1_mix_00077058	chr6	-	3612	8	NNC	ENSG00000120256.11	novel	3634	7	NA	NA	12	2122	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	30.4805056468851	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCACGCGCAGTGGCTCAC	-15	True	NA	NA	False	NA	NA	NA	149864347	149816634	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_149816664_149818795_149820704_149826263_149826360_149836084_149836298_149837337_149837464_149842982_149843125_149853002_149853161_149863407
H1_mix_00077059	chr6	-	3615	8	NNC	ENSG00000120256.11	novel	3634	7	NA	NA	12	2122	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	30.4805056468851	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCACGCGCAGTGGCTCAC	-15	True	NA	NA	False	NA	NA	NA	149864347	149816634	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_149816667_149818795_149820704_149826263_149826360_149836084_149836298_149837337_149837464_149842982_149843125_149853002_149853161_149863407
H1_mix_00077060	chr6	-	3111	5	FSM	ENSG00000131019.11	ENST00000367339.7	3111	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.29903810567666	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAGATTTCCATTTCCAT	1	True	NA	NA	False	ATTAAA	-19	NA	150069121	150061052	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_150063352_150064584_150064714_150065397_150065674_150065898_150066163_150068978
H1_mix_00077061	chr6	-	3013	2	NNC	ENSG00000181472.5	novel	3103	3	NA	NA	21225	5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATGTCATCTCTGCGTC	4465	False	NA	-9	True	AATAAA	-24	NA	151370334	151364109	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_151366893_151370104
H1_mix_00077062	chr6	-	3180	11	FSM	ENSG00000155906.20	ENST00000682004.1	3180	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_8	56.7775483796192	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATATCGTGTGAATAAAAT	-16	True	NA	-34	True	AAGAAA	-18	NA	151452146	151404794	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_151405268_151405719_151405837_151417278_151417400_151421244_151422606_151423524_151423632_151427481_151427583_151430137_151430178_151433154_151433231_151436419_151436555_151445307_151445826_151452015
H1_mix_00077067	chr6	-	1770	4	FSM	ENSG00000074706.14	ENST00000522590.1	2245	4	475	0	475	0	multi-exon	FALSE	canonical	1	1	junction_1	0	519	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAAACAAAA	6526	False	NA	NA	False	NA	NA	NA	154212855	154158923	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_154160041_154167919_154168114_154199667_154200041_154212769
H1_mix_00077069	chr6	-	621	4	FSM	ENSG00000029639.11	ENST00000468889.5	621	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	276.774677711351	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTCTTTTAATATATACT	NA	False	NA	NA	False	AATAAA	-26	NA	155297069	155257652	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_155257909_155260272_155260401_155285157_155285278_155296952
H1_mix_00077073	chr6	-	3134	15	NNC	ENSG00000092820.19	novel	3052	14	NA	NA	-55	82529	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1405.40957970789	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGGCCAACCTCAGAGGTA	NA	False	NA	NA	False	AAAAAG	-4	NA	158819423	158683211	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_158683239_158765747_158767079_158767260_158767513_158769325_158769419_158769783_158769945_158770763_158770895_158771243_158771408_158776407_158776505_158783519_158783667_158784643_158784728_158785308_158785584_158787107_158787204_158789287_158789372_158818081_158818167_158819316
H1_mix_00077098	chr6	-	5643	22	FSM	ENSG00000186340.17	ENST00000676628.1	5635	22	0	-8	0	0	multi-exon	FALSE	canonical	2	2	junction_12	30.2945479779483	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTCTCCCTTTTTTAAAA	NA	False	NA	1	True	AATAAA	-27	NA	169254050	169215779	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_169217830_169220197_169220338_169221429_169221528_169222196_169222469_169223247_169223476_169225144_169225380_169226179_169226299_169228121_169228282_169229571_169229680_169231979_169232199_169232663_169232817_169232889_169233018_169237169_169237347_169237624_169237796_169239598_169239696_169240451_169240593_169241761_169241959_169246196_169246282_169248416_169248974_169250732_169250807_169253723_169253897_169253989
H1_mix_00077100	chr6	-	3510	20	FSM	ENSG00000184465.16	ENST00000546525.5	3511	20	0	1	0	-1	multi-exon	FALSE	canonical	3	9	junction_4	35.48758122291	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCATGCCCTGTTCAATT	NA	False	NA	-16	True	ATTAAA	-18	NA	169667275	169558321	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_169559928_169582835_169582935_169602218_169602322_169613558_169613657_169632946_169633069_169634427_169634526_169638538_169638661_169643696_169643787_169647772_169647871_169649197_169649276_169651929_169652009_169658275_169658359_169659085_169659208_169659450_169659519_169660662_169660767_169662303_169662425_169663562_169663650_169664165_169664287_169665485_169665557_169667135
H1_mix_00077102	chr6	-	3972	7	NIC	ENSG00000184465.16	novel	4654	16	NA	NA	13	0	intron_retention	FALSE	canonical	3	20	junction_5	41.4397152499869	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATATTTCCTATTGGTTTG	NA	False	NA	-6	True	AATAAA	-20	NA	169667262	169657761	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_169658359_169659085_169659208_169659450_169659519_169660662_169660767_169662303_169662425_169664165_169664633_169664769
H1_mix_00077108	chr6	+	6204	1	Intergenic	novelGene_1218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCCAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	CATAAA	-27	NA	3992521	3998725	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_3992500_3998700
H1_mix_00077109	chr6	+	443	1	Intergenic	novelGene_1226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGGGAAAAGAGAGAGTAGA	NA	False	NA	NA	False	NA	NA	NA	14301006	14301449	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_14301000_14301400
H1_mix_00077110	chr6	+	205	1	Intergenic	novelGene_1235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	180	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAGACACGTTTTATCCA	NA	False	NA	NA	False	NA	NA	NA	19539513	19539718	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_19539500_19539700
H1_mix_00077111	chr6	+	200	1	Intergenic	novelGene_1236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAACTCCCAACCTCAGGTG	NA	False	NA	NA	False	NA	NA	NA	20799070	20799270	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_20799100_20799300
H1_mix_00077112	chr6	+	246	1	Intergenic	novelGene_1238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGGGTCAGGTGTGGTAT	NA	False	NA	NA	False	NA	NA	NA	21363100	21363346	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_21363100_21363300
H1_mix_00077113	chr6	+	232	1	Intergenic	novelGene_1240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGTAAAGCCTAGGTAAT	NA	False	NA	NA	False	AAGAAA	-45	NA	21363648	21363880	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_21363600_21363900
H1_mix_00077114	chr6	+	380	1	Intergenic	novelGene_1241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGTCTAAGTTGGCACC	NA	False	NA	NA	False	AAAAAG	-15	NA	21364149	21364529	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_21364100_21364500
H1_mix_00077115	chr6	+	234	1	Intergenic	novelGene_1242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGGTTGCTGCCAAACGA	NA	False	NA	NA	False	NA	NA	NA	21365037	21365271	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_21365000_21365300
H1_mix_00077116	chr6	+	300	1	Intergenic	novelGene_1246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTCTAGTTCTTAAACT	8154	False	NA	NA	False	NA	NA	NA	26180265	26180565	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_26180300_26180600
H1_mix_00077119	chr6	+	306	1	Intergenic	novelGene_1262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	309	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAGACGCAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	28675687	28675993	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_28675700_28676000
H1_mix_00077120	chr6	+	259	1	Intergenic	novelGene_1270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGCCACGTTCATGACTG	NA	False	NA	NA	False	NA	NA	NA	33364819	33365078	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_33364800_33365100
H1_mix_00077122	chr6	+	262	1	Intergenic	novelGene_1272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCAAAGTGCTGGGATTA	766	False	NA	NA	False	NA	NA	NA	41788443	41788705	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_41788400_41788700
H1_mix_00077124	chr6	+	274	1	Intergenic	novelGene_1286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGTTAATTAAGTCTTGT	NA	False	NA	NA	False	NA	NA	NA	81348478	81348752	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_81348500_81348800
H1_mix_00077125	chr6	+	358	1	Intergenic	novelGene_1288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGTGCCTTAACCTGG	2758	False	NA	NA	False	ATTAAA	-9	NA	85644895	85645253	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_85644900_85645300
H1_mix_00077126	chr6	+	263	1	Intergenic	novelGene_1300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAGGTATGAGCCACTGC	NA	False	NA	NA	False	NA	NA	NA	106014068	106014331	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_106014100_106014300
H1_mix_00077127	chr6	+	286	1	Intergenic	novelGene_1301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACTTTTTCCACTTT	NA	False	NA	NA	False	NA	NA	NA	106676670	106676956	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_106676700_106677000
H1_mix_00077128	chr6	+	1170	1	Intergenic	novelGene_1304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCTCTACTCCCTCCTTG	NA	False	NA	NA	False	NA	NA	NA	115033612	115034782	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_115033600_115034800
H1_mix_00077129	chr6	+	309	1	Intergenic	novelGene_1306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAACTGATGACATTCCAC	NA	False	NA	NA	False	NA	NA	NA	115036976	115037285	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_115037000_115037300
H1_mix_00077131	chr6	+	432	1	Intergenic	novelGene_1308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTATAGCATAACCTGCCT	NA	False	NA	NA	False	NA	NA	NA	121621693	121622125	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_121621700_121622100
H1_mix_00077132	chr6	+	1134	1	Intergenic	novelGene_1312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTTATTCCATTTAGT	3897	False	NA	NA	False	NA	NA	NA	122843687	122844821	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_122843700_122844800
H1_mix_00077138	chr6	+	625	1	FSM	ENSG00000272320.1	ENST00000607565.1	1989	1	333	1031	333	-1031	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCATGTGGTCTGCCAGA	NA	False	NA	NA	False	NA	NA	NA	3311994	3312619	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_3312000_3312600
H1_mix_00077139	chr6	+	3306	7	NNC	ENSG00000153046.18	novel	690	4	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_1	95.495200577481	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAATGTTTCTCTGATT	NA	False	NA	18	True	AATAAA	-20	NA	4772966	4955544	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_4773174_4891712_4892380_4935514_4935772_4937564_4937738_4943545_4943757_4952265_4952410_4953897
H1_mix_00077140	chr6	+	3169	7	NNC	ENSG00000153046.18	novel	690	4	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	96.5809965204796	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAATGTTTCTCTGATT	13	False	NA	18	True	AATAAA	-20	NA	4773042	4955544	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_4773179_4891712_4892380_4935580_4935772_4937564_4937738_4943545_4943757_4952265_4952410_4953897
H1_mix_00077141	chr6	+	8815	13	NNC	ENSG00000124782.21	novel	8625	13	NA	NA	-71	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	19.0189963516013	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGCCGGTCACGTGGCCG	NA	False	NA	12	True	AATAAA	-22	NA	7107525	7251980	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_7107789_7107868_7108061_7176654_7176774_7181123_7181247_7181869_7182083_7187433_7187524_7189158_7189323_7210803_7210949_7211572_7211710_7226466_7226657_7228996_7231908_7246423_7247222_7248510
H1_mix_00077143	chr6	+	307	1	FSM	ENSG00000219294.6	ENST00000460661.1	1656	1	-179	1528	-179	-1528	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGGCATGCCCATCAAGA	NA	False	NA	NA	False	NA	NA	NA	7986357	7986664	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_7986400_7986700
H1_mix_00077144	chr6	+	915	5	FSM	ENSG00000111843.14	ENST00000467415.5	899	5	-16	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	438.979142443009	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTATGGGGTCTTCATT	-1	True	NA	NA	False	AATAAA	-18	NA	10723108	10731129	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_10723242_10724960_10725038_10725906_10726009_10728639_10728728_10730614
H1_mix_00077147	chr6	+	888	5	FSM	ENSG00000137210.14	ENST00000612333.4	888	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	527.705114149939	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATAATATTTCCTATGG	0	True	NA	NA	False	AATAAA	-8	NA	10747758	10756971	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_10747882_10749201_10749269_10751132_10751235_10755141_10755233_10756466
H1_mix_00077148	chr6	+	562	3	FSM	ENSG00000235051.3	ENST00000436249.3	666	3	16	88	16	-88	multi-exon	FALSE	canonical	1	1	junction_1	2	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGGATCGCTTGAGCCCA	NA	False	NA	NA	False	NA	NA	NA	10881795	10884261	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_10881854_10882319_10882418_10883855
H1_mix_00077149	chr6	+	644	9	FSM	ENSG00000153157.13	ENST00000487561.2	644	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	7.06664701255129	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGCAGTTCAACATATC	NA	False	NA	NA	False	AATAGA	-11	NA	10898013	10924584	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_10898116_10898823_10898849_10902676_10902763_10902874_10902964_10910147_10910201_10910823_10910870_10912672_10912766_10912866_10912928_10924495
H1_mix_00077152	chr6	+	2431	11	ISM	ENSG00000112137.19	ENST00000675203.2	3045	13	146650	-137	-4	131	3prime_fragment	FALSE	canonical	3	11	junction_2	3.47706773014274	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGTGCGCCTTGAAGC	NA	False	NA	NA	False	NA	NA	NA	13160203	13287974	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_13160285_13182518_13182687_13184798_13185006_13205814_13206137_13227815_13228064_13230036_13230194_13272859_13272916_13278267_13278330_13283421_13283563_13286145_13286223_13287062
H1_mix_00077153	chr6	+	728	5	FSM	ENSG00000112137.19	ENST00000379335.8	858	5	130	0	103	0	multi-exon	FALSE	canonical	3	15	junction_2	2.5	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTGAGTCCAAAGAAAGCT	138	False	NA	NA	False	NA	NA	NA	13272859	13287454	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_13272916_13278267_13278330_13283421_13283563_13286145_13286223_13287062
H1_mix_00077154	chr6	+	3559	8	FSM	ENSG00000124523.17	ENST00000681231.1	3555	8	-4	0	0	0	multi-exon	FALSE	canonical	3	130	junction_7	20.5108234245001	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTGAGTTGCAGCCCAG	-13	True	NA	NA	False	TTTAAA	-44	NA	13574579	13601734	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_13574625_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13599031
H1_mix_00077155	chr6	+	4341	9	FSM	ENSG00000124523.17	ENST00000680402.1	4337	9	-4	0	0	0	multi-exon	FALSE	canonical	1	5	junction_7	53.7620625999412	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGCTCCAAGGCGGCCTG	-13	True	NA	NA	False	NA	NA	NA	13574579	13615158	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_13574625_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13600833_13600950_13611789
H1_mix_00077156	chr6	+	1665	1	FSM	ENSG00000272209.1	ENST00000607518.1	1143	1	-601	79	-601	-79	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGACTTTAAGTGCTTTAC	NA	False	NA	NA	False	AATAAA	-14	NA	13824830	13826495	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_13824800_13826500
H1_mix_00077157	chr6	+	3549	3	NIC	ENSG00000180537.13	novel	3274	2	NA	NA	115	-3	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	13	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGAAGTTTGATTTCTCT	98	False	NA	6	True	ATTAAA	-18	NA	13925069	13980005	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_13925367_13974209_13974365_13976908
H1_mix_00077158	chr6	+	335	1	FSM	ENSG00000263712.1	ENST00000584938.1	69	1	-276	10	-276	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTGCAGGCATATCTTT	NA	False	NA	NA	False	NA	NA	NA	16141279	16141614	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_16141300_16141600
H1_mix_00077159	chr6	+	1344	1	FSM	ENSG00000272341.1	ENST00000606924.1	2538	1	1094	100	1094	-100	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTAATATCTCCATTTTT	2049	False	NA	NA	False	NA	NA	NA	16765439	16766783	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_16765400_16766800
H1_mix_00077160	chr6	+	3221	10	FSM	ENSG00000112186.13	ENST00000489374.5	1430	10	-203	-1588	-165	467	multi-exon	FALSE	canonical	1	2	junction_4	36.6302849808431	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGAATCTGTCAGCTTGC	49	False	NA	NA	False	AATAAA	-14	NA	17393429	17558247	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_17393747_17421554_17421677_17426589_17426691_17462995_17463074_17539268_17539459_17540972_17541149_17542836_17542961_17543060_17543144_17551463_17551605_17556358
H1_mix_00077161	chr6	+	2897	22	FSM	ENSG00000165097.16	ENST00000449850.2	2877	22	-20	0	2	0	multi-exon	FALSE	canonical	1	2	junction_16	7.12792089152424	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACTGCTGAAAGTCTGG	-12	True	NA	NA	False	NA	NA	NA	18155423	18222212	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_18155572_18155882_18155927_18159882_18159983_18161326_18161455_18162834_18162925_18166266_18166379_18171362_18171480_18185771_18185811_18187791_18188003_18191196_18191382_18197056_18197234_18197586_18197662_18200438_18200577_18201485_18201658_18205536_18205665_18207397_18207530_18208128_18208207_18212487_18212605_18213655_18213782_18215006_18215130_18217732_18217886_18221908
H1_mix_00077162	chr6	+	371	1	FSM	ENSG00000214012.4	ENST00000449496.2	1282	1	304	607	304	-607	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCATGGAGGTAGATGCC	NA	False	NA	NA	False	AGTAAA	-33	NA	19613058	19613429	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_19613100_19613400
H1_mix_00077163	chr6	+	4953	7	FSM	ENSG00000112242.16	ENST00000535432.2	4425	7	-528	0	-528	0	multi-exon	FALSE	canonical	3	15	junction_2	37.8901922226144	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTGTGGATGGGTTTT	763	False	NA	16	True	AATAAA	-45	NA	20403150	20493714	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_20403833_20479845_20479958_20481223_20481426_20482761_20482921_20486688_20486804_20488112_20488249_20490167
H1_mix_00077164	chr6	+	1025	9	NNC	ENSG00000145996.11	novel	3272	16	NA	NA	16	230563	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_8	61.9596642986387	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTATGACGGATTGTTT	19	True	NA	NA	False	AATAAA	-42	NA	20534496	20790235	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_20534575_20535350_20535395_20546345_20546524_20548592_20548706_20649292_20649378_20739518_20739616_20758594_20758644_20781144_20781266_20789975
H1_mix_00077165	chr6	+	1742	10	FSM	ENSG00000272168.9	ENST00000655154.1	1742	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	29.9571710741424	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAGTGTAGGTAAGACAG	202	False	NA	74	True	AAAAAG	-35	NA	21666387	22194435	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_21666646_21668646_21668900_21783631_21783709_21909469_21909604_21978944_21979063_22020338_22020543_22056545_22056691_22110746_22110819_22191566_22191657_22194044
H1_mix_00077166	chr6	+	294	1	FSM	ENSG00000280443.1	ENST00000624804.1	202	1	-127	35	-127	-35	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGATGAAACCAAAAGCCAG	9821	False	NA	NA	False	AATATA	-26	NA	21822408	21822702	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_21822400_21822700
H1_mix_00077168	chr6	+	4391	4	FSM	ENSG00000112304.11	ENST00000537591.5	4391	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	467.421294622599	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGGAGAAAAAAAAAAAA	-49	True	NA	NA	False	AATAAA	-36	NA	24667034	24705065	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_24667345_24687404_24687694_24697882_24698068_24701458
H1_mix_00077169	chr6	+	450	1	FSM	ENSG00000272402.1	ENST00000606921.1	405	1	94	-139	94	139	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCATCTAAAAACTAAATTG	8865	False	NA	NA	False	NA	NA	NA	24706840	24707290	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_24706800_24707300
H1_mix_00077170	chr6	+	863	3	NNC	ENSG00000079691.18	novel	5485	37	NA	NA	98	-166811	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	54.5	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTGTTGCTGTTT	10	True	NA	NA	False	ATTAAA	-17	NA	25279471	25285786	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_25279836_25284811_25284910_25285385
H1_mix_00077171	chr6	+	4005	8	FSM	ENSG00000112343.11	ENST00000357085.5	9418	8	-23	5436	-23	-5436	multi-exon	FALSE	canonical	0	0	junction_7	3.57998973889762	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGGAGGCCTCCCTAACAT	0	True	NA	NA	False	NA	NA	NA	25962778	25985795	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_25962856_25963048_25963283_25966334_25966934_25969324_25969421_25971868_25972100_25973053_25973077_25973172_25973286_25983163
H1_mix_00077172	chr6	+	508	1	FSM	ENSG00000275714.2	ENST00000613854.2	508	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAAAGTAGCTGTAAGAA	-2	True	NA	NA	False	NA	NA	NA	26020450	26020958	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26020400_26021000
H1_mix_00077173	chr6	+	495	1	FSM	ENSG00000158373.9	ENST00000377777.6	486	1	13	-22	-11	22	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATTTCATTCAAAAGGGG	8	True	NA	3	True	AATAAA	-10	NA	26158134	26158629	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26158100_26158600
H1_mix_00077174	chr6	+	2313	1	FSM	ENSG00000186470.14	ENST00000604202.1	3009	1	791	-95	791	-20	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGGAAATGCTTCAGATG	8243	False	NA	NA	False	NA	NA	NA	26373483	26375796	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26373500_26375800
H1_mix_00077177	chr6	+	3385	10	FSM	ENSG00000026950.17	ENST00000289361.11	3388	10	3	0	3	0	multi-exon	FALSE	canonical	1	1	junction_8	3.62433476228891	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCAACTTGGCTTTTTC	13	True	NA	7	True	AATAAA	-18	NA	26402277	26415208	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_26402413_26405371_26405649_26405908_26406257_26407670_26407953_26409532_26409734_26409893_26409915_26410005_26410033_26411108_26411136_26411554_26411582_26413168
H1_mix_00077178	chr6	+	749	1	ISM	ENSG00000224843.8	ENST00000607607.5	5607	3	13318	3309	13215	-351	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGACGTGACAGTGGTTG	NA	False	NA	NA	False	ATTAAA	-10	NA	26970309	26971058	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_26970300_26971100
H1_mix_00077179	chr6	+	248	1	FSM	ENSG00000274997.2	ENST00000377459.3	457	1	11	198	11	-198	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCCGCGTCACCTCCAAC	11	True	NA	NA	False	NA	NA	NA	27147116	27147364	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_27147100_27147400
H1_mix_00077180	chr6	+	267	1	FSM	ENSG00000237154.2	ENST00000417812.1	300	1	2	31	2	-31	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATGCTGAATTTGCAAAAT	284	False	NA	NA	False	NA	NA	NA	27407698	27407965	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_27407700_27408000
H1_mix_00077181	chr6	+	2445	2	NNC	ENSG00000287252.2	novel	2751	3	NA	NA	-391	0	intron_retention	FALSE	canonical	1	7	junction_1	0	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATAAGAAGTCTCTTCCTT	2048	False	NA	3	True	ATTAAA	-13	NA	27759478	27763184	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_27760464_27761724
H1_mix_00077182	chr6	+	5086	1	FSM	ENSG00000233822.6	ENST00000612898.2	542	1	-2854	-1690	-2830	1690	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAACCAAATTATACATTG	NA	False	NA	NA	False	AATAAA	-44	NA	27835714	27840800	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_27835700_27840800
H1_mix_00077183	chr6	+	482	1	FSM	ENSG00000276903.2	ENST00000613174.2	482	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	308	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTCTGCGGGAGAGCTG	-1	True	NA	NA	False	AATACA	-24	NA	27865316	27865798	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_27865300_27865800
H1_mix_00077184	chr6	+	725	1	FSM	ENSG00000274641.2	ENST00000616182.2	467	1	3	-261	3	261	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTAAATGGAGT	2	True	NA	NA	False	NA	NA	NA	27893427	27894152	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_27893400_27894200
H1_mix_00077185	chr6	+	1633	1	FSM	ENSG00000217539.2	ENST00000401788.2	1633	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAATTGACACAAATCTCA	NA	False	NA	NA	False	NA	NA	NA	28010722	28012355	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_28010700_28012400
H1_mix_00077186	chr6	+	279	1	FSM	ENSG00000220721.2	ENST00000402365.2	945	1	920	-254	920	254	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCCGTCTCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	28074235	28074514	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_28074200_28074500
H1_mix_00077187	chr6	+	3069	7	NNC	ENSG00000137338.6	novel	3080	7	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	19.8109116958867	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTTGTGCACTTATTTA	-9	True	NA	7	True	NA	NA	NA	28281575	28302549	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_28281919_28283775_28284210_28285550_28285701_28287079_28287169_28296815_28296946_28297894_28297992_28300723
H1_mix_00077188	chr6	+	2188	6	NNC	ENSG00000189298.14	novel	4687	6	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	16.3633737352662	451	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGTGAGATTACCTTCAT	-14	True	NA	6	True	AATAAA	-15	NA	28349932	28366746	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_28350068_28359524_28359902_28361323_28361472_28363302_28363386_28363691_28363816_28365425
H1_mix_00077189	chr6	+	1032	3	FSM	ENSG00000227214.2	ENST00000438190.1	1032	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGTATAAGTCAACAAGCA	514	False	NA	NA	False	NA	NA	NA	28986202	28987484	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_28986233_28986312_28986507_28986676
H1_mix_00077190	chr6	+	317	2	FSM	ENSG00000244349.1	ENST00000445544.1	317	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTCGCACGGCGCCCCG	1111	False	NA	NA	False	CATAAA	-15	NA	28986799	28988536	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_28986880_28988299
H1_mix_00077191	chr6	+	893	1	FSM	ENSG00000231301.1	ENST00000441979.1	518	1	24	-399	24	399	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTAATCCCAGCATTTTG	NA	False	NA	NA	False	NA	NA	NA	29582531	29583424	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_29582500_29583400
H1_mix_00077192	chr6	+	1515	1	FSM	ENSG00000204657.4	ENST00000383640.4	1514	1	-1	0	-1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACACCCATTACATTGTG	NA	False	NA	NA	False	NA	NA	NA	29587453	29588968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_29587500_29589000
H1_mix_00077193	chr6	+	882	6	FSM	ENSG00000204642.14	ENST00000434407.6	884	6	0	2	0	-1	multi-exon	FALSE	canonical	1	1	junction_3	6.30555310817378	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGGTAGATATGTTTTTA	28	False	NA	14	True	AATAAA	-26	NA	29723463	29726524	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_29723528_29723657_29723928_29724172_29724449_29725446_29725564_29726010_29726044_29726402
H1_mix_00077194	chr6	+	1127	6	FSM	ENSG00000204632.13	ENST00000376818.7	1127	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	10.2097992144802	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTACACGTGTTTCTTGTG	20	False	NA	12	True	AATAAA	-23	NA	29827844	29831125	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_29827918_29828046_29828317_29829417_29829694_29829815_29829933_29830377_29830411_29830767
H1_mix_00077195	chr6	+	1261	6	NNC	ENSG00000206341.7	novel	1096	7	NA	NA	623	589	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	10.4422219857653	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCCAGAGTCCATGTGTT	208	False	NA	7	True	AATAAA	-16	NA	29888374	29891071	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_29888743_29889327_29889605_29889706_29889824_29890263_29890297_29890438_29890486_29890652
H1_mix_00077196	chr6	+	1356	6	FSM	ENSG00000206503.13	ENST00000479320.5	1334	6	-22	0	0	0	multi-exon	FALSE	canonical	3	564	junction_2	72.629470602504	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAGCTTGGAGGACCTA	-4	True	NA	NA	False	NA	NA	NA	29942531	29945281	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_29942627_29942756_29943544_29944121_29944398_29944499_29944617_29945058_29945092_29945233
H1_mix_00077197	chr6	+	1705	4	FSM	ENSG00000204619.8	ENST00000376769.6	1689	4	-16	0	-9	0	multi-exon	FALSE	canonical	2	8	junction_2	198.462982834471	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTAAATATGGGCCCAT	34	False	NA	18	True	AATAAA	-19	NA	30067188	30070333	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30067480_30068278_30068354_30068589_30068699_30069103
H1_mix_00077198	chr6	+	1723	2	FSM	ENSG00000204619.8	ENST00000376758.1	1723	2	0	0	0	0	multi-exon	FALSE	canonical	3	430	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTAAATATGGGCCCAT	664	False	NA	18	True	AATAAA	-19	NA	30068205	30070333	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30068699_30069103
H1_mix_00077199	chr6	+	3347	9	FSM	ENSG00000204599.15	ENST00000376656.8	3338	9	-9	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	46.362532016705	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTGTGTTGTGTGGTAA	264	False	NA	26	True	NA	NA	NA	30326834	30343728	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30326996_30328888_30329042_30329310_30329771_30330780_30330877_30335744_30335976_30339907_30339931_30340271_30340362_30340504_30340621_30341711
H1_mix_00077201	chr6	+	3115	8	NIC	ENSG00000204599.15	novel	3338	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	31.3088629298348	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTGTGTTGTGTGGTAA	30	False	NA	26	True	NA	NA	NA	30326956	30343728	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_30326996_30328908_30329042_30329310_30329771_30330780_30330877_30335744_30335976_30339907_30339931_30340504_30340621_30341711
H1_mix_00077203	chr6	+	575	5	FSM	ENSG00000241370.6	ENST00000433076.6	577	5	2	0	-1	0	multi-exon	FALSE	canonical	3	17	junction_2	502.756899505119	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTGTTCTGTGGGTAT	NA	False	NA	24	True	AATAAA	-22	NA	30345132	30346857	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30345229_30345297_30345399_30345466_30345574_30346431_30346558_30346712
H1_mix_00077204	chr6	+	1010	1	FSM	ENSG00000236603.2	ENST00000455094.1	651	1	6	-365	6	365	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCTTTTTCAACTCAAT	39	False	NA	22	True	AATAAA	-32	NA	30485945	30486955	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30485900_30487000
H1_mix_00077206	chr6	+	1501	10	NIC	ENSG00000137343.18	novel	1527	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	36	junction_7	70.5372679711903	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTTGAAAAATTTGACTC	10	True	NA	14	True	AATAAA	-23	NA	30626876	30646823	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30642175_30642248_30645894_30645975_30646066
H1_mix_00077207	chr6	+	1294	14	NNC	ENSG00000137343.18	novel	1476	13	NA	NA	0	-1	at_least_one_novel_splicesite	TRUE	canonical	2	5	junction_8	82.3992301911533	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTCTGTAATCTTAATTT	-8	True	NA	NA	False	ATTAAA	-20	NA	30626892	30646401	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30641787_30641871_30642175_30642248_30642767_30643012_30645894_30645975_30646066_30646110_30646274
H1_mix_00077208	chr6	+	1366	12	NIC	ENSG00000137343.18	novel	1476	13	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	36	junction_7	58.7954852935928	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGCTGTTGAAAAATTTG	-8	True	NA	10	True	AATAAA	-19	NA	30626892	30646819	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30642175_30642248_30642767_30643012_30645894_30645975_30646066_30646110_30646468
H1_mix_00077210	chr6	+	3431	2	FSM	ENSG00000196230.14	ENST00000681421.1	3412	2	-19	0	0	0	multi-exon	FALSE	canonical	3	12848	junction_1	0	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAATTGAAAAAAGCTGCG	23	False	NA	18	True	AATAAA	-2	NA	30721666	30725408	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30723029_30723339
H1_mix_00077211	chr6	+	2903	4	FSM	ENSG00000196230.14	ENST00000396389.5	2903	4	0	0	0	0	multi-exon	FALSE	canonical	2	459	junction_1	5806.35554084201	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGATGTGTGCTTATTTAG	23	False	NA	36	True	AATAAA	-20	NA	30721666	30725426	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30722263_30722536_30722646_30722917_30723029_30723339
H1_mix_00077212	chr6	+	2823	4	FSM	ENSG00000196230.14	ENST00000396384.1	2823	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6022.71937472324	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGATGTGTGCTTATTTAG	55	False	NA	36	True	AATAAA	-20	NA	30721698	30725426	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30722215_30722536_30722646_30722917_30723029_30723339
H1_mix_00077213	chr6	+	527	2	FSM	ENSG00000272273.2	ENST00000607333.2	573	2	0	46	0	-43	multi-exon	FALSE	canonical	3	14	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCCTTGCATAAGTTAAAA	-8	True	NA	25	True	AATAAA	-40	NA	30742928	30743592	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_30743097_30743233
H1_mix_00077214	chr6	+	4084	19	NIC	ENSG00000204580.14	novel	4148	20	NA	NA	24	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	219.002402884388	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGGTTCCTTG	4380	False	NA	25	True	AATAAA	-18	NA	30880803	30900156	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_30881126_30884537_30884711_30885624_30885681_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
H1_mix_00077215	chr6	+	3687	18	NIC	ENSG00000204580.14	novel	3942	21	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	147	junction_1	155.758818975303	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACTGTGTGAGTGGGTTC	-5	True	NA	21	True	AATAAA	-14	NA	30882936	30900152	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_30882984_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30895403_30895515_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
H1_mix_00077216	chr6	+	3601	17	NIC	ENSG00000204580.14	novel	3832	16	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	172.74543228404	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGGTTCCTTG	188	False	NA	25	True	AATAAA	-18	NA	30883173	30900156	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_30883242_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
H1_mix_00077217	chr6	+	5340	19	NIC	ENSG00000204580.14	novel	3857	19	NA	NA	0	822	intron_retention	FALSE	canonical	3	29	junction_1	193.079502911222	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCATAAGCCATATTTGA	4	True	NA	22	True	AATAAA	-22	NA	30883444	30900978	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_30884146_30884537_30884711_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30895403_30895515_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
H1_mix_00077218	chr6	+	1707	14	NNC	ENSG00000213780.11	novel	1712	14	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	8.56648208920181	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGGTCCCGGGCGCCTCC	1	True	NA	40	True	AATAAA	-17	NA	30908207	30914106	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_30908404_30909033_30909174_30909434_30909540_30909931_30910060_30910664_30910762_30910852_30910942_30911157_30911270_30911430_30911500_30911683_30911768_30912013_30912147_30912327_30912459_30913109_30913158_30913308_30913388_30913810
H1_mix_00077219	chr6	+	3803	30	NNC	ENSG00000137411.19	novel	3575	30	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	32.2525335674889	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATGTCTGTTTATGGCT	-6	True	NA	14	True	GATAAA	-14	NA	30914251	30926456	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_30914345_30914809_30915038_30915155_30915238_30915354_30915456_30915745_30915868_30915980_30916048_30916151_30916250_30916877_30916960_30917104_30917225_30917694_30918052_30918826_30918916_30919757_30919849_30920088_30920217_30920332_30920437_30920667_30920750_30921064_30921142_30921229_30921306_30921588_30921692_30921924_30921996_30922115_30922242_30922449_30922555_30922705_30922775_30922897_30922977_30923103_30923232_30923352_30923506_30924353_30924561_30925273_30925386_30925543_30925720_30925879_30926009_30926108
H1_mix_00077220	chr6	+	7117	31	NNC	ENSG00000204469.13	novel	6903	31	NA	NA	-217	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_10	174.774699414863	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTACAATGATTTGGGGG	358	False	NA	30	True	AATAAA	-19	NA	31620497	31637771	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_31620859_31622689_31622902_31623731_31623910_31624260_31624361_31624449_31624523_31625170_31625315_31625459_31625612_31625791_31625872_31626019_31626163_31626771_31626863_31626984_31627199_31627764_31628240_31629143_31629335_31629547_31629846_31630590_31630802_31631138_31632993_31633378_31633648_31633858_31633990_31634235_31634366_31634471_31634558_31634752_31634978_31635131_31635273_31635393_31635466_31635581_31635750_31635966_31636050_31636208_31636420_31636509_31636609_31636732_31636946_31637041_31637137_31637233_31637325_31637445
H1_mix_00077221	chr6	+	6851	31	NNC	ENSG00000204469.13	novel	6861	31	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_10	172.448578487102	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTACAATGATTTGGGGG	10	True	NA	30	True	AATAAA	-19	NA	31620726	31637771	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_31620859_31622726_31622902_31623731_31623910_31624260_31624361_31624449_31624523_31625170_31625315_31625459_31625612_31625791_31625872_31626019_31626163_31626771_31626863_31626984_31627199_31627764_31628240_31629143_31629335_31629547_31629846_31630590_31630802_31631138_31632993_31633378_31633648_31633858_31633990_31634235_31634366_31634471_31634558_31634752_31634978_31635131_31635273_31635393_31635466_31635581_31635750_31635966_31636050_31636208_31636420_31636509_31636609_31636732_31636946_31637041_31637137_31637233_31637325_31637445
H1_mix_00077225	chr6	+	2654	3	FSM	ENSG00000240053.8	ENST00000375864.4	2654	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	8.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCACATTGTTTGTGG	190	False	NA	17	True	AATAAA	-18	NA	31670166	31673546	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31671009_31671155_31671285_31671863
H1_mix_00077226	chr6	+	493	2	FSM	ENSG00000244355.8	ENST00000479334.1	493	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGAGTAGGAGTAGAGAAG	9	False	NA	NA	False	NA	NA	NA	31715355	31717804	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31715625_31717580
H1_mix_00077227	chr6	+	2920	25	FSM	ENSG00000204410.16	ENST00000375755.8	2936	25	16	0	16	0	multi-exon	FALSE	canonical	2	7	junction_9	13.4432965533839	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTGTTTCTTTAGTCTC	1748	False	NA	NA	False	AATAAA	-17	NA	31739963	31762676	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31740221_31740453_31740614_31741162_31741287_31742876_31742958_31743107_31743171_31743903_31744026_31744189_31744300_31744545_31744582_31745236_31745320_31747386_31747433_31753300_31753440_31753566_31753630_31758164_31758294_31758547_31758621_31758765_31758876_31759096_31759178_31759424_31759513_31759785_31759976_31760089_31760217_31760689_31760840_31761187_31761263_31761471_31761616_31761817_31761956_31762111_31762186_31762419
H1_mix_00077228	chr6	+	2721	25	FSM	ENSG00000204410.16	ENST00000375750.9	2721	25	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_9	12.5938146193545	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTGTTTCTTTAGTCTC	13	True	NA	NA	False	AATAAA	-17	NA	31740004	31762676	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31740063_31740453_31740614_31741162_31741287_31742876_31742958_31743107_31743171_31743903_31744026_31744189_31744300_31744545_31744582_31745236_31745320_31747386_31747433_31753300_31753440_31753566_31753630_31758164_31758294_31758547_31758621_31758765_31758876_31759096_31759178_31759424_31759513_31759785_31759976_31760089_31760217_31760689_31760840_31761187_31761263_31761471_31761616_31761817_31761956_31762111_31762186_31762419
H1_mix_00077230	chr6	+	599	4	FSM	ENSG00000204387.14	ENST00000375641.6	602	4	3	0	3	0	multi-exon	FALSE	canonical	3	11	junction_1	271.146127064766	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACGTGGTTTGGTCTCA	15	True	NA	16	True	AATAAA	-16	NA	31834629	31839761	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31834769_31835410_31835452_31837235_31837436_31839542
H1_mix_00077231	chr6	+	1660	8	FSM	ENSG00000204344.16	ENST00000375331.7	1663	8	0	3	0	2	multi-exon	FALSE	canonical	2	4	junction_1	30.5447146301408	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGGATGTCCTTTATT	33	False	NA	NA	False	AATAAA	-19	NA	31971830	31981448	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31972217_31972301_31972512_31972620_31972758_31978902_31978999_31979413_31979554_31980450_31980549_31980653_31980802_31981003
H1_mix_00077232	chr6	+	1557	8	FSM	ENSG00000204344.16	ENST00000375333.3	1557	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	36.1086794925248	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGGATGTCCTTTA	146	False	NA	NA	False	AATAAA	-17	NA	31971943	31981446	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_31972217_31972301_31972512_31972620_31972758_31978902_31979011_31979413_31979554_31980450_31980549_31980653_31980802_31981003
H1_mix_00077234	chr6	+	233	2	FSM	ENSG00000224389.9	ENST00000478388.1	583	2	11	339	11	-175	multi-exon	FALSE	canonical	3	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGCGCCGGGAGCTGCCC	NA	False	NA	NA	False	NA	NA	NA	32031598	32031928	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_32031645_32031741
H1_mix_00077235	chr6	+	1938	10	NIC	ENSG00000221988.13	novel	2111	10	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	68.7369291727436	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGACTTGGCTCATTTCC	6	True	NA	15	True	AATAAA	-15	NA	32153549	32163675	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_32153637_32154195_32154405_32154586_32154778_32155029_32155184_32155687_32155784_32155870_32155979_32157636_32157721_32157839_32157925_32162567_32162623_32162806
H1_mix_00077237	chr6	+	1322	9	FSM	ENSG00000241404.7	ENST00000395512.5	1312	9	-10	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	25.7509101780889	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTCCCACCCTCTCCTT	-6	True	NA	15	True	AATAAA	-17	NA	32164594	32168281	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_32164682_32166137_32166267_32166497_32166621_32166700_32166811_32166909_32167006_32167086_32167258_32167349_32167430_32167502_32167657_32167909
H1_mix_00077239	chr6	+	2045	3	FSM	ENSG00000225914.4	ENST00000653922.1	2125	3	80	0	80	0	multi-exon	FALSE	canonical	0	0	junction_1	2	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTATAGATGATACATAATT	NA	False	NA	-1	True	AATAAA	-12	NA	32255161	32391945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_32255415_32365779_32365840_32390213
H1_mix_00077241	chr6	+	2294	6	ISM	ENSG00000204256.14	ENST00000464592.6	4520	13	5839	-470	352	-1	3prime_fragment	FALSE	canonical	3	543	junction_3	80.6860582752684	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTAAATAAAGAAAATATTA	223	False	NA	11	True	NA	NA	NA	32976920	32981285	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_32977571_32977756_32978006_32978125_32978389_32979827_32980133_32980341_32980465_32980581
H1_mix_00077242	chr6	+	6686	1	Genic_Genomic	ENSG00000224557.8	novel	NA	NA	NA	NA	10355	4719	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGCCTTCATCTTTCATC	9730	False	NA	5	True	ATTAAA	-15	NA	33127117	33133803	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr6_+_33127100_33133800
H1_mix_00077243	chr6	+	6159	3	NNC	ENSG00000224557.8	novel	776	5	NA	NA	10698	14197	intron_retention	TRUE	canonical	3	7	junction_1	2.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGATCCTGGCTCTGCGCTG	NA	False	NA	NA	False	NA	NA	NA	33127460	33143281	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_33131415_33133451_33133496_33141120
H1_mix_00077245	chr6	+	609	6	FSM	ENSG00000112511.18	ENST00000427004.5	609	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	28.9247299036655	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAAAGGCACTTCCCTGT	NA	False	NA	NA	False	NA	NA	NA	33410398	33413294	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33410506_33411165_33411216_33412247_33412423_33412507_33412590_33412697_33412794_33413195
H1_mix_00077246	chr6	+	4556	20	FSM	ENSG00000197283.18	ENST00000293748.9	4556	20	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_10	9.44410587266323	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGGGGCCCTATTACCCC	53	False	NA	NA	False	NA	NA	NA	33420309	33452395	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33420332_33423476_33423599_33425797_33425904_33432160_33432253_33432684_33432807_33435151_33435306_33435514_33435614_33437667_33438292_33438418_33438564_33438774_33438920_33440728_33440966_33441172_33441375_33441580_33441760_33442452_33442495_33442888_33443961_33444443_33444618_33446574_33446787_33447842_33447934_33448788_33448869_33451759
H1_mix_00077247	chr6	+	5936	3	ISM	ENSG00000197283.18	ENST00000293748.9	4556	20	25533	-1294	-868	0	intron_retention	FALSE	canonical	3	26	junction_2	5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCTGTGCCGACTTTCTTA	2644	False	NA	21	True	AATAAA	-18	NA	33445842	33453689	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_33446787_33447842_33447934_33448788
H1_mix_00077248	chr6	+	9870	59	FSM	ENSG00000096433.11	ENST00000374316.9	9870	59	0	0	0	0	multi-exon	TRUE	canonical	1	9	junction_1	39.9383628853804	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGATGTGTTTCCTGCACTC	29	False	NA	27	True	AATAAA	-27	NA	33620364	33696574	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_33620437_33620614_33621692_33640483_33640555_33655765_33655888_33657931_33658019_33658669_33658829_33659020_33659120_33659465_33659550_33662527_33662675_33662910_33663007_33663499_33663551_33663737_33663881_33664869_33664970_33665052_33665214_33665834_33665977_33667128_33667291_33667791_33667965_33668514_33668635_33668973_33669157_33670324_33670577_33670670_33670816_33671164_33671307_33672028_33672229_33673590_33673721_33674207_33674266_33675690_33675857_33676767_33676933_33677014_33677090_33677503_33677630_33678420_33678544_33678638_33678840_33679881_33680134_33680328_33680455_33680554_33680681_33682523_33682645_33683206_33683398_33684019_33684169_33684356_33684466_33684597_33684689_33684773_33684944_33685358_33685534_33685642_33685828_33686052_33686254_33686408_33686520_33687008_33687105_33687225_33687328_33687477_33687565_33688056_33688168_33688238_33688432_33688655_33688782_33689237_33689411_33690033_33690199_33690916_33691110_33691614_33691720_33691800_33691929_33692727_33692894_33693544_33693706_33694923_33695086_33695711
H1_mix_00077249	chr6	+	2406	7	ISM	ENSG00000096433.11	ENST00000605930.3	9079	58	29	35570	29	-35570	5prime_fragment	FALSE	canonical	3	127	junction_4	16.8588914885357	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTGGTCTACATAGAAT	17	True	NA	13	True	AATAAA	-27	NA	33621350	33660992	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_33621692_33640483_33640555_33655765_33655888_33657931_33658019_33658669_33658829_33659020_33659120_33659465
H1_mix_00077251	chr6	+	7812	22	FSM	ENSG00000146197.9	ENST00000274938.8	7819	22	0	7	0	-7	multi-exon	FALSE	canonical	0	0	junction_13	2.20183390889465	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTCAGCCCGGCATCTTT	-1	True	NA	NA	False	ATTAAA	-14	NA	35213955	35253072	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_35214504_35227579_35227703_35228613_35228740_35231724_35231860_35232849_35232976_35233184_35233302_35237901_35238019_35239751_35239875_35240373_35240491_35241140_35241267_35241542_35241660_35241805_35241911_35242203_35242321_35242621_35242781_35243020_35243237_35243593_35243756_35243962_35244131_35244649_35244812_35245227_35245426_35245943_35246097_35246205_35246286_35248555
H1_mix_00077252	chr6	+	1476	5	FSM	ENSG00000065029.15	ENST00000491400.5	1476	5	0	0	0	0	multi-exon	TRUE	canonical	1	7	junction_1	74.8214541425118	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATGTGCAACAGAACAG	7358	False	NA	NA	False	NA	NA	NA	35258908	35288315	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_35259387_35281055_35281225_35286127_35286209_35286321_35286400_35287645
H1_mix_00077253	chr6	+	552	1	FSM	ENSG00000219023.1	ENST00000403958.1	392	1	-108	-52	-108	52	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACAGGGTCTTGCTCTGT	7732	False	NA	NA	False	AATAAA	-25	NA	35555764	35556316	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_35555800_35556300
H1_mix_00077254	chr6	+	373	2	FSM	ENSG00000112078.14	ENST00000443316.2	406	2	-12	45	0	-45	multi-exon	FALSE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACCAGCAATTTTCTTTT	-34	True	NA	NA	False	NA	NA	NA	36442999	36443678	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_36443112_36443417
H1_mix_00077255	chr6	+	2570	6	NNC	ENSG00000137193.14	novel	2703	6	NA	NA	59	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	125.198402545719	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGTGGCTTCTAATCGTCT	15	True	NA	25	True	AATAAA	-16	NA	37170210	37175428	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_37170658_37170772_37170880_37170980_37171032_37171198_37171492_37172995_37173173_37173933
H1_mix_00077256	chr6	+	1800	7	FSM	ENSG00000112130.17	ENST00000469731.5	1800	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_6	122.709231745438	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTGCTCAGCTGGGCTT	26	False	NA	12	True	AATAAA	-13	NA	37354090	37391231	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_37354276_37360445_37360575_37368483_37369219_37371511_37371575_37374619_37374710_37376925_37377034_37390741
H1_mix_00077257	chr6	+	6185	25	FSM	ENSG00000146122.17	ENST00000274867.9	6185	25	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_20	1.82526634281746	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCCTTTAAACTTGTGC	-2	True	NA	16	True	ATTAAA	-20	NA	39792375	39904869	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_39792466_39856246_39856471_39860927_39861018_39864432_39864508_39864979_39865075_39867509_39867844_39868822_39868934_39870339_39870444_39871505_39871573_39873237_39873356_39875329_39875469_39878202_39878262_39878403_39878589_39879177_39879478_39883961_39884070_39887485_39887593_39888678_39888764_39891340_39891448_39891633_39891723_39896811_39896981_39897174_39897283_39898876_39898938_39900076_39900209_39901301_39901473_39901812
H1_mix_00077258	chr6	+	366	2	FSM	ENSG00000278224.7	ENST00000463606.1	366	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCAGGCCTGTGGCCAG	3731	False	NA	NA	False	NA	NA	NA	41784791	41785421	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_41785073_41785336
H1_mix_00077259	chr6	+	3443	6	FSM	ENSG00000112578.10	ENST00000489290.1	1153	6	-293	-1997	-258	1606	multi-exon	TRUE	canonical	2	4	junction_2	76.0010526242894	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAATGTGTCACTCATT	NA	False	NA	NA	False	NA	NA	NA	41921240	41934652	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_41921831_41927373_41927537_41930634_41930769_41931395_41931557_41931727_41931831_41932360
H1_mix_00077261	chr6	+	6687	13	NNC	ENSG00000112624.13	novel	6501	13	NA	NA	-660	2	intron_retention	FALSE	canonical	3	17	junction_1	11.130538571376	141	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGTGATTGTCTTGATT	NA	False	NA	11	True	AATACA	-23	NA	42746297	42868560	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_42746363_42781838_42782102_42822017_42822064_42822795_42822845_42822934_42823004_42828492_42830173_42852091_42852198_42853637_42853739_42855855_42855918_42857090_42857237_42860261_42860357_42862509_42862613_42864658
H1_mix_00077262	chr6	+	1600	5	NNC	ENSG00000146223.16	novel	4499	6	NA	NA	16	-46	intron_retention	FALSE	canonical	2	7	junction_1	228.164962253191	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAAGCATGTGTTTTGTT	59	False	NA	NA	False	NA	NA	NA	42879697	42887192	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_42879952_42883453_42883615_42884612_42884751_42885973_42886084_42886255
H1_mix_00077263	chr6	+	4075	5	ISM	ENSG00000146223.16	ENST00000483998.6	1103	6	314	-2597	-1	-2	intron_retention	FALSE	canonical	3	69	junction_1	201.525432638166	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATGTATGTACCATGACA	7	True	NA	27	True	AATAAA	-24	NA	42879931	42889898	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_42879952_42883450_42883615_42884612_42884751_42885973_42886084_42886255
H1_mix_00077264	chr6	+	955	5	ISM	ENSG00000137161.18	ENST00000372836.5	1431	6	-288	1124	-288	-1124	5prime_fragment	FALSE	canonical	3	379	junction_2	89.8314393739742	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCGCCAACCACGTGCT	27	True	NA	NA	False	NA	NA	NA	42929191	42938170	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_42929722_42934474_42934599_42935573_42935671_42937716_42937840_42938089
H1_mix_00077265	chr6	+	663	2	FSM	ENSG00000231113.2	ENST00000607218.1	984	2	58	263	58	-263	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATCCAATTAGCAGAGAAG	5041	False	NA	NA	False	NA	NA	NA	42943797	42948097	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_42943971_42947607
H1_mix_00077266	chr6	+	3162	10	FSM	ENSG00000112640.16	ENST00000676174.1	3162	10	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_3	45.5804809859832	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATAAAGTGGGTCTCTG	453	False	NA	-2	True	NA	NA	NA	43006929	43012318	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43007111_43007195_43007307_43007413_43007507_43007934_43008261_43008366_43009228_43009321_43009450_43010467_43010570_43010663_43010737_43010880_43010998_43011148
H1_mix_00077268	chr6	+	2355	1	FSM	ENSG00000124541.7	ENST00000607555.1	1005	1	-1339	-11	-1339	11	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTTGGTTTTGTTTTTG	6775	False	NA	22	True	TATAAA	-19	NA	43031812	43034167	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43031800_43034200
H1_mix_00077272	chr6	+	4917	21	ISM	ENSG00000124574.15	ENST00000372530.9	5043	22	334	2	19	0	3prime_fragment	FALSE	canonical	3	43	junction_1	15.2422931345648	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTGAGGTCTCCTCTGT	4	True	NA	16	True	ATTAAA	-20	NA	43427874	43450425	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_43428140_43432141_43433361_43434620_43434849_43435750_43435908_43436137_43436248_43437933_43438014_43438623_43438796_43441861_43441961_43442969_43443160_43443932_43444011_43444158_43444354_43444787_43444939_43445124_43445315_43445598_43445943_43446276_43446447_43447247_43447409_43447683_43447938_43448880_43449027_43449106_43449205_43449421_43449535_43449928
H1_mix_00077274	chr6	+	1343	9	FSM	ENSG00000171453.20	ENST00000645141.1	1334	9	-9	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	110.164649502461	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTGAGACTACTTTTGA	-8	True	NA	6	True	AATAAA	-19	NA	43517087	43521513	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43517179_43517305_43517378_43519332_43519441_43519705_43519906_43520065_43520186_43520274_43520428_43520624_43520775_43520931_43521049_43521181
H1_mix_00077275	chr6	+	249	1	FSM	ENSG00000252218.1	ENST00000516409.1	127	1	-218	96	-218	-96	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTGAGTCTGCTGTTAG	NA	False	NA	NA	False	AATAGA	-12	NA	43543925	43544174	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_43543900_43544200
H1_mix_00077277	chr6	+	2775	4	FSM	ENSG00000181577.16	ENST00000336600.6	5250	4	13	2462	13	0	multi-exon	FALSE	canonical	1	4	junction_1	2.82842712474619	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTTGTAGACTCTAAAGG	-7	True	NA	NA	False	AATGAA	-20	NA	44000597	44005150	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_44000701_44001016_44001144_44002052_44002128_44002680
H1_mix_00077278	chr6	+	2444	7	FSM	ENSG00000153291.16	ENST00000411689.6	2526	7	76	6	16	-6	multi-exon	FALSE	canonical	1	1	junction_6	10.1762250149825	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGAACAATTGATTTAGCT	9	True	NA	26	True	AGTAAA	-34	NA	46652990	46678184	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_46653299_46655842_46656035_46658961_46659047_46662375_46662499_46664773_46664887_46668708_46668794_46676646
H1_mix_00077282	chr6	+	3398	1	FSM	ENSG00000197261.12	ENST00000529246.4	1428	1	-300	-1670	-298	-1295	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAACTTCATAGAGGGTT	NA	False	NA	NA	False	AATAAA	-4	NA	49550367	49553765	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_49550400_49553800
H1_mix_00077283	chr6	+	2492	4	NIC	ENSG00000197261.12	novel	1820	5	NA	NA	-298	9	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	18.3545331972483	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTTGTCTTGATTGTTT	NA	False	NA	6	True	AATAAA	-21	NA	49550367	49561916	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_49551676_49551880_49552571_49554876_49555158_49561703
H1_mix_00077284	chr6	+	1429	3	NIC	ENSG00000197261.12	novel	650	2	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	3	3	junction_1	20.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTTTATTAAAAGAAACAG	224	False	NA	NA	False	GATAAA	-37	NA	49550983	49555308	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_49551291_49551880_49552571_49554876
H1_mix_00077286	chr6	+	1586	13	FSM	ENSG00000112146.17	ENST00000370939.7	1580	13	-6	0	-6	0	multi-exon	TRUE	non_canonical	0	0	junction_3	125.798339505028	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACCTAAGTTATAAATGTG	8	False	NA	28	True	ATTAAA	-18	NA	53064991	53097888	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_53065209_53071056_53071144_53073480_53073640_53076485_53076544_53078798_53078899_53080967_53081099_53082503_53082619_53092428_53092548_53092733_53092825_53093465_53093562_53093884_53093979_53095512_53095665_53097721
H1_mix_00077287	chr6	+	460	1	FSM	ENSG00000242865.3	ENST00000493405.3	297	1	240	-403	240	403	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCCCCTGCACTAATTTT	NA	False	NA	NA	False	NA	NA	NA	53091200	53091660	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_53091200_53091700
H1_mix_00077288	chr6	+	558	1	FSM	ENSG00000216854.2	ENST00000407033.2	553	1	-9	4	-9	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTAAATTCAGCGTTAAAA	NA	False	NA	NA	False	AAAAAG	-43	NA	56871181	56871739	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_56871200_56871700
H1_mix_00077289	chr6	+	5544	5	NNC	ENSG00000168116.14	novel	2789	4	NA	NA	0	3805	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	110.184787970028	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTTTGTGAGTCTACTT	-1	True	NA	15	True	AATAAA	-28	NA	57046692	57059044	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_57046777_57047312_57047397_57050773_57050855_57052685_57056100_57057163
H1_mix_00077291	chr6	+	8501	4	Intergenic	novelGene_1277	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	7.58653778449403	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCCTTTTAGTCTTTATT	NA	False	NA	10	True	AATAAA	-21	NA	62831045	62902187	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_62831269_62885307_62885376_62887209_62887340_62894107
H1_mix_00077292	chr6	+	6009	14	NIC	ENSG00000118482.12	novel	18797	16	NA	NA	-1	939	intron_retention	FALSE	canonical	3	38	junction_1	30.6381824665249	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACAGCAACTGGATAGGC	15	True	NA	-70	True	NA	NA	NA	63635834	63713302	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_63636151_63679999_63680162_63684128_63685912_63691736_63692044_63694580_63694765_63698222_63698368_63698448_63698606_63700349_63700467_63702507_63702640_63703535_63703672_63706028_63706225_63706728_63706877_63709150_63709241_63711166
H1_mix_00077293	chr6	+	7163	16	NIC	ENSG00000118482.12	novel	18797	16	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	40.7216022387245	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTAATTACCTTCAGACA	17	True	NA	4	True	AGTAAA	-18	NA	63635836	63714504	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_63636151_63646618_63646796_63679999_63680162_63684128_63685912_63691736_63692044_63694580_63694765_63698222_63698368_63698448_63698606_63700349_63700467_63702507_63702640_63703535_63703672_63706028_63706225_63706728_63706877_63709150_63709241_63711166_63711363_63711585
H1_mix_00077294	chr6	+	2872	1	FSM	ENSG00000214558.4	ENST00000398578.2	2436	1	-138	-298	-138	298	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACTTAGTGACTCCTTGA	NA	False	NA	NA	False	AAAAAG	-35	NA	65302383	65305255	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_65302400_65305300
H1_mix_00077295	chr6	+	5810	23	NIC	ENSG00000082269.17	novel	5042	22	NA	NA	20	0	intron_retention	FALSE	canonical	3	20	junction_3	48.886041375042	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACCCTTGTAATCCTTTG	-51	True	NA	22	True	AATAAA	-30	NA	70413444	70561170	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_70413703_70415290_70415377_70426569_70426710_70428303_70428420_70452491_70452572_70475409_70475550_70475662_70475734_70477158_70477333_70480900_70481028_70482000_70482155_70486166_70486245_70491033_70491084_70502635_70502792_70522512_70522587_70523966_70524122_70524930_70526699_70528291_70528453_70533159_70533252_70533756_70533855_70536259_70536412_70538290_70538402_70556749_70556864_70559715
H1_mix_00077296	chr6	+	2045	10	ISM	ENSG00000082269.17	ENST00000361499.7	5042	22	-67	77694	3	-21995	5prime_fragment	FALSE	canonical	3	106	junction_3	31.4925035171512	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTGAATCTGTATTCTT	15	True	NA	NA	False	AATAAA	-21	NA	70413510	70482965	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_70413703_70415290_70415377_70426438_70426533_70428303_70428420_70452491_70452572_70475409_70475550_70475662_70475734_70477158_70477333_70480900_70481028_70482000
H1_mix_00077297	chr6	+	5756	18	NIC	ENSG00000082269.17	novel	6215	22	NA	NA	3	-1	intron_retention	FALSE	canonical	2	5	junction_10	56.4674631488229	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAACCCTTGTAATCCTTT	15	True	NA	21	True	AATAAA	-29	NA	70413510	70561169	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_70413703_70452491_70452572_70475409_70475550_70475662_70475734_70477158_70477333_70480900_70481028_70482000_70482155_70491033_70491084_70502635_70502792_70522512_70522587_70524342_70526699_70528291_70528453_70533159_70533252_70533756_70533855_70536259_70536412_70538290_70538402_70556749_70556864_70559715
H1_mix_00077298	chr6	+	6244	23	NNC	ENSG00000082269.17	novel	6215	22	NA	NA	62	-1	intron_retention	FALSE	canonical	3	21	junction_3	47.5599882184473	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAACCCTTGTAATCCTTT	144	False	NA	21	True	AATAAA	-29	NA	70413639	70561169	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_70413703_70415290_70415377_70426569_70426752_70428303_70428420_70452491_70452572_70475409_70475550_70475662_70475734_70477158_70477333_70480900_70481028_70482000_70482155_70486166_70486245_70491033_70491084_70502635_70502792_70522512_70522587_70523966_70524122_70524342_70526699_70528291_70528453_70533159_70533252_70533756_70533855_70536259_70536412_70538290_70538402_70556749_70556864_70559715
H1_mix_00077300	chr6	+	3750	1	FSM	ENSG00000234882.1	ENST00000433978.1	1316	1	-2124	-310	-2124	310	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCCAACATGGCAAAACCC	NA	False	NA	NA	False	NA	NA	NA	73289837	73293587	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_73289800_73293600
H1_mix_00077301	chr6	+	1008	3	FSM	ENSG00000203908.4	ENST00000370367.4	1037	3	29	0	29	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	186	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACGTCTGTATTTTGGAA	18	False	NA	NA	False	AATAAA	-14	NA	73362686	73364171	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_73362899_73363094_73363275_73363555
H1_mix_00077303	chr6	+	4150	23	NIC	ENSG00000112701.18	novel	6671	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	122.696704947438	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATGATTAATTTGATAT	-1	True	NA	7	True	AATAAA	-19	NA	75601926	75715904	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_75602577_75623899_75623961_75633580_75633727_75634706_75634812_75640686_75640705_75647730_75647802_75659261_75659408_75663220_75663519_75666711_75666942_75670552_75670721_75675434_75675469_75675859_75676055_75677029_75677257_75678582_75678693_75678810_75678928_75695803_75695924_75697424_75697518_75702644_75703073_75709526_75709631_75711327_75711417_75713512_75713582_75713674_75713826_75715384
H1_mix_00077304	chr6	+	240	1	FSM	ENSG00000252498.1	ENST00000516689.1	94	1	7	-153	7	153	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATACCTGACGAGTTCTC	5439	False	NA	NA	False	NA	NA	NA	75644090	75644330	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_75644100_75644300
H1_mix_00077306	chr6	+	5625	35	NIC	ENSG00000196586.17	novel	8642	36	NA	NA	-23	-12	combination_of_known_junctions	FALSE	canonical	3	16	junction_29	68.4391035859908	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTCTTCCATCTCTCG	8	True	NA	-8	True	AGTAAA	-9	NA	75749291	75916600	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_75749424_75817500_75817665_75822781_75822852_75828539_75828614_75830415_75830546_75832841_75832948_75835900_75835957_75840584_75840683_75841213_75841379_75844896_75844978_75848350_75848532_75855138_75855284_75857096_75857255_75858901_75858994_75861022_75861096_75862595_75862724_75866525_75866622_75866931_75867106_75870646_75870686_75873206_75873301_75879819_75879951_75880042_75880121_75881688_75881819_75886003_75886095_75886843_75886995_75890056_75890266_75891227_75891307_75892529_75892691_75894813_75894841_75895230_75895261_75898372_75898412_75907604_75907709_75908495_75908628_75914062_75914282_75914812
H1_mix_00077307	chr6	+	529	1	FSM	ENSG00000231762.1	ENST00000440811.1	2285	1	1832	-76	1832	76	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGAAGGTCCTGTGTAT	NA	False	NA	NA	False	ACTAAA	-27	NA	76662317	76662846	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_76662300_76662800
H1_mix_00077308	chr6	+	1360	2	FSM	ENSG00000287811.2	ENST00000671258.1	1422	2	0	62	0	4	multi-exon	FALSE	canonical	3	13	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAGTGTCACAATTTT	287	False	NA	NA	False	NA	NA	NA	79537539	79539914	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_79537713_79538727
H1_mix_00077310	chr6	+	4381	3	FSM	ENSG00000146242.9	ENST00000535040.4	3392	3	-989	0	-989	0	multi-exon	FALSE	canonical	2	3	junction_1	110	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTCTCAATGTCTTA	NA	False	NA	NA	False	AATAAA	-22	NA	82362216	82367417	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_82363540_82363645_82363909_82364622
H1_mix_00077311	chr6	+	1006	6	NNC	ENSG00000083097.15	novel	7743	39	NA	NA	7616	-18522	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	11.9096599447675	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCCTATTTTCATCGAGC	7590	False	NA	NA	False	AATGAA	-4	NA	83075286	83110406	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_83075374_83096730_83096824_83096924_83097116_83100704_83100887_83108909_83109081_83110124
H1_mix_00077312	chr6	+	1977	3	NNC	ENSG00000013392.8	novel	3769	3	NA	NA	13	-2398	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	24	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGAAGCTGATTTGATT	1	True	NA	7	True	AATAAA	-15	NA	83193369	83196537	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_83193444_83194311_83195272_83195594
H1_mix_00077314	chr6	+	1819	2	FSM	ENSG00000168830.8	ENST00000305344.7	1826	2	7	0	7	0	multi-exon	FALSE	canonical	0	0	junction_1	0	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATTTTGTAGAAGTAATA	-2	True	NA	5	True	AATAAA	-19	NA	86937534	87016679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_86937824_87015149
H1_mix_00077315	chr6	+	12512	9	NIC	ENSG00000188994.13	novel	12341	8	NA	NA	-372	0	combination_of_known_junctions	FALSE	canonical	3	3	junction_1	32.825057121047	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCTGCCTTTAAACATTC	157	False	NA	25	True	ATTAAA	-33	NA	87155192	87265943	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_87155362_87155562_87155760_87215902_87216058_87216298_87216378_87218595_87218732_87233324_87233528_87243474_87243612_87245502_87245645_87254649
H1_mix_00077316	chr6	+	288	2	FSM	ENSG00000188994.13	ENST00000518845.1	277	2	-11	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTCACGTCAGCTCCA	-4	True	NA	NA	False	AAAAAG	-23	NA	87155564	87243567	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_87155760_87243474
H1_mix_00077317	chr6	+	9807	6	Fusion	ENSG00000111850.11_ENSG00000203872.7	novel	1344	5	NA	NA	0	0	intron_retention	FALSE	canonical	1	1	junction_3	122.408169661996	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATTGATTCCCCAGCCT	-13	True	NA	1	True	AATAAA	-15	NA	87322587	87365462	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr6_+_87322633_87337008_87337167_87340115_87348907_87350393_87350502_87356300_87356504_87364960
H1_mix_00077319	chr6	+	2650	21	NNC	ENSG00000135336.16	novel	2501	20	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	256.398634941764	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGCAGTTGCTTTAGC	NA	False	NA	16	True	AATAAA	-23	NA	87590067	87667451	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_87590193_87594352_87594408_87594541_87594614_87601783_87601882_87603383_87603539_87605916_87606022_87607672_87607825_87609095_87609230_87612088_87612249_87616313_87616428_87621353_87621488_87621949_87622014_87634844_87634962_87636406_87636487_87653115_87653250_87656902_87656983_87657920_87658019_87663002_87663145_87664742_87664860_87665753_87665834_87667017
H1_mix_00077320	chr6	+	1753	2	FSM	ENSG00000146278.11	ENST00000369472.1	816	2	-32	-905	-32	90	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTCCTTACAAATGCAGA	279	False	NA	NA	False	AATATA	-40	NA	89080718	89085250	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_89080974_89083752
H1_mix_00077321	chr6	+	4544	9	NNC	ENSG00000146281.6	novel	4703	7	NA	NA	-27960	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	38.4819356971554	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATTGTCTTGCTTTTTTA	NA	False	NA	26	True	AATAAA	-16	NA	89118094	89165565	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_89118173_89140322_89140442_89140733_89140933_89149264_89149414_89153042_89153186_89154747_89154903_89158324_89158461_89161782_89161891_89162108
H1_mix_00077323	chr6	+	6108	9	NIC	ENSG00000118412.13	novel	6088	9	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_1	25.2140833662459	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACTACCCAATTTTTACA	-13	True	NA	NA	False	GATAAA	-13	NA	89829879	89871388	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_89830068_89846561_89846645_89853165_89853235_89854816_89854918_89855469_89855545_89857083_89857200_89862125_89864372_89865952_89869083_89871288
H1_mix_00077324	chr6	+	3034	1	Intergenic	novelGene_1290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGCCTATTTTACAAGAA	NA	False	NA	NA	False	NA	NA	NA	90671427	90674461	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_90671400_90674500
H1_mix_00077325	chr6	+	6141	1	FSM	ENSG00000280451.1	ENST00000624663.1	1212	1	-473	-4456	-473	4456	mono-exon	FALSE	NA	NA	NA	NA	NA	1422	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTGGAGAAGAATATATCT	NA	False	NA	NA	False	AATAAA	-10	NA	93811351	93817492	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_93811400_93817500
H1_mix_00077326	chr6	+	1855	2	Intergenic	novelGene_1298	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATTAGTGTCTTAAACA	NA	False	NA	NA	False	AATAAA	-20	NA	97787395	97792610	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_97787501_97790860
H1_mix_00077327	chr6	+	330	1	FSM	ENSG00000232699.3	ENST00000602288.1	736	1	206	200	206	-200	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGATACGCCATCTCTAC	256	False	NA	NA	False	NA	NA	NA	99174949	99175279	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_99174900_99175300
H1_mix_00077328	chr6	+	801	5	NNC	ENSG00000279170.3	novel	1873	4	NA	NA	0	276	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	24.7537875889731	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGGCCGAGGCAGGTGGA	31	False	NA	NA	False	NA	NA	NA	99521017	99531996	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_99521148_99521714_99521801_99526063_99526110_99531362_99531537_99531631
H1_mix_00077329	chr6	+	439	5	NNC	ENSG00000279170.3	novel	4376	4	NA	NA	0	-81	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_4	27.968732541894	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCACAGTTCTCTTATAC	31	False	NA	-80	True	NA	NA	NA	99521017	99553719	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_99521148_99526063_99526110_99531631_99531791_99548296_99548385_99553703
H1_mix_00077330	chr6	+	2632	4	FSM	ENSG00000279170.3	ENST00000651400.1	4376	4	0	1744	0	-1744	multi-exon	TRUE	canonical	3	11	junction_3	26.1576417557513	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGCATTGTAACTTTAG	31	False	NA	NA	False	NA	NA	NA	99521017	99577949	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_99521148_99526063_99526110_99531631_99531791_99575652
H1_mix_00077331	chr6	+	559	5	NNC	ENSG00000279170.3	novel	2082	5	NA	NA	12	-4	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	26.9293055981769	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCACCCAGTCTATGGTAC	7	True	NA	-3	True	AATAAA	-14	NA	99521060	99553796	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_99521148_99526063_99526110_99531362_99531537_99531631_99531791_99553703
H1_mix_00077332	chr6	+	293	3	FSM	ENSG00000203808.13	ENST00000661925.1	644	3	89	262	89	-252	multi-exon	FALSE	canonical	1	1	junction_1	1	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTACTGTTTTATTTAGTG	NA	False	NA	NA	False	NA	NA	NA	105136596	105147378	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_105136633_105137769_105137924_105147275
H1_mix_00077333	chr6	+	2200	7	FSM	ENSG00000130348.11	ENST00000369044.1	2158	7	-48	6	-12	-6	multi-exon	FALSE	canonical	3	193	junction_5	24.0393196428037	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TATCTCAAAAAAAAAAAAAA	-9	True	NA	NA	False	NA	NA	NA	106629565	106653817	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_106629706_106640348_106640509_106640822_106640922_106642993_106643091_106649024_106649202_106652208_106652385_106652466
H1_mix_00077334	chr6	+	5092	7	FSM	ENSG00000112320.12	ENST00000317357.10	6225	7	-11	1144	0	-1144	multi-exon	FALSE	canonical	2	7	junction_4	3.8151743807532	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCATTATTATGACTACT	-17	True	NA	28	True	AATAAA	-43	NA	107490105	107660162	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_107490713_107503656_107503796_107506241_107506428_107533458_107533611_107587079_107587176_107633513_107635470_107658206
H1_mix_00077335	chr6	+	2110	3	NNC	ENSG00000286511.1	novel	2167	2	NA	NA	-17173	29	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	3	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTCCTCCAACACTGATG	1670	False	NA	23	True	AATAAA	-29	NA	108781755	108837142	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_108781788_108782187_108782352_108835228
H1_mix_00077336	chr6	+	1375	7	ISM	ENSG00000118690.13	ENST00000392644.9	3734	18	6	74318	6	19902	5prime_fragment	FALSE	canonical	2	5	junction_5	12.9443252259651	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGTCTCATAAACTGGC	5	True	NA	NA	False	ATTAAA	-20	NA	108848427	108900158	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_108848547_108854224_108854486_108858198_108858272_108868823_108868996_108876142_108876351_108894466_108894544_108899693
H1_mix_00077337	chr6	+	2211	10	NIC	ENSG00000183137.15	novel	2522	12	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	19	junction_1	25.4723282440542	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGGAAGCCTATGGGAA	19	False	NA	4	True	AATAAA	-17	NA	109095520	109163903	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_109095576_109146757_109146938_109150117_109150240_109153832_109153950_109155229_109155308_109155790_109155878_109159024_109159103_109159268_109159463_109160571_109160717_109162748
H1_mix_00077338	chr6	+	1263	10	ISM	ENSG00000183137.15	ENST00000368968.6	1649	11	6	2398	0	0	5prime_fragment	FALSE	canonical	2	16	junction_1	26.6073414170591	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTGTTGTATCTCTGTA	24	False	NA	13	True	AATAAA	-18	NA	109095525	109160765	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_109095576_109145218_109145382_109146757_109146938_109150117_109150240_109153832_109153950_109155229_109155308_109155790_109155878_109159024_109159103_109159268_109159463_109160571
H1_mix_00077339	chr6	+	233	3	FSM	ENSG00000203799.14	ENST00000473454.6	547	3	157	157	144	-133	multi-exon	FALSE	canonical	1	1	junction_1	0	405	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCAACTGACAGCTTTTC	NA	False	NA	NA	False	AAAAAG	-37	NA	109344143	109354906	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_109344197_109348426_109348548_109354847
H1_mix_00077340	chr6	+	519	1	FSM	ENSG00000260273.1	ENST00000563105.1	872	1	73	280	73	-280	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCGCCATCTACTGCCA	449	False	NA	NA	False	AGTAAA	-2	NA	109382867	109383386	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_109382900_109383400
H1_mix_00077341	chr6	+	3211	24	FSM	ENSG00000112367.12	ENST00000676037.1	3211	24	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_19	65.7014787506256	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATTTGCTGTTGTTGCCT	-26	True	NA	2	True	AATAAA	-10	NA	109691264	109825422	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109788797_109788957_109789593_109789678_109791375_109791572_109792581_109792665_109796764_109796852_109825087
H1_mix_00077343	chr6	+	322	1	FSM	ENSG00000173214.7	ENST00000672494.1	362	1	116	-76	116	76	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTCAGAGTGTGAATAT	NA	False	NA	NA	False	NA	NA	NA	111295565	111295887	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_111295600_111295900
H1_mix_00077345	chr6	+	479	3	NNC	ENSG00000231889.8	novel	915	3	NA	NA	84	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	19	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCGTGTTACACTTGTC	158	False	NA	NA	False	ATTAAA	-16	NA	111483748	111503608	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_111483797_111484743_111484862_111503295
H1_mix_00077346	chr6	+	2421	1	FSM	ENSG00000255389.1	ENST00000531702.1	2421	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCCCATGTTTTTTTTTT	NA	False	NA	10	True	AATAAA	-22	NA	111599874	111602295	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_111599900_111602300
H1_mix_00077347	chr6	+	465	1	FSM	ENSG00000218208.1	ENST00000402798.1	447	1	-18	0	-18	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAACCAGAAGACAAGTAA	21	False	NA	NA	False	NA	NA	NA	113581482	113581947	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_113581500_113581900
H1_mix_00077348	chr6	+	1063	5	NNC	ENSG00000228624.8	novel	850	2	NA	NA	59472	-120	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	33.7453700527939	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATCTAACTATAATTTT	NA	False	NA	NA	False	NA	NA	NA	114341283	114456514	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_114341425_114371591_114371693_114437968_114438067_114448966_114449032_114455856
H1_mix_00077349	chr6	+	5455	3	NNC	ENSG00000228624.8	novel	786	6	NA	NA	-27100	-28683	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	680	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGGAGATAAGGGTGGGG	NA	False	NA	NA	False	AAAAAG	-10	NA	114398511	114427951	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_114398537_114422479_114427173_114427214
H1_mix_00077350	chr6	+	8223	1	Genic_Genomic	ENSG00000228624.8	novel	NA	NA	NA	NA	-5893	-28693	mono-exon	FALSE	NA	NA	NA	NA	NA	410	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGTCAGCAAAGGGAGAT	NA	False	NA	NA	False	NA	NA	NA	114419718	114427941	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr6_+_114419700_114427900
H1_mix_00077351	chr6	+	8149	3	NNC	ENSG00000228624.8	novel	786	6	NA	NA	-5893	-28683	at_least_one_novel_splicesite	FALSE	canonical	2	766	junction_2	297	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGGAGATAAGGGTGGGG	NA	False	NA	NA	False	AAAAAG	-10	NA	114419718	114427951	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_114427173_114427214_114427257_114427298
H1_mix_00077353	chr6	+	8065	3	NNC	ENSG00000228624.8	novel	786	6	NA	NA	-5893	-28683	at_least_one_novel_splicesite	TRUE	canonical	3	766	junction_2	337.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGGAGATAAGGGTGGGG	NA	False	NA	NA	False	AAAAAG	-10	NA	114419718	114427951	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_114427089_114427214_114427257_114427298
H1_mix_00077355	chr6	+	851	2	ISM	ENSG00000111817.19	ENST00000647046.1	1257	4	3072	3	3072	-3	3prime_fragment	FALSE	canonical	2	3	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATCTATTTTAAAATATAA	2888	False	NA	5	True	AATAAA	-19	NA	116257278	116259237	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_+_116257338_116258445
H1_mix_00077358	chr6	+	1080	3	NNC	ENSG00000286339.1	novel	906	3	NA	NA	8754	5457	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	24.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCTGATGACTCCGATA	21	False	NA	2	True	AATAAA	-16	NA	118574413	118582297	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_118574700_118576250_118576476_118581728
H1_mix_00077368	chr6	+	3294	22	NIC	ENSG00000198945.8	novel	762	7	NA	NA	-108	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	13.3127391975998	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATAAATTAGGTAGTGT	646	False	NA	NA	False	AATAAA	-11	NA	130019258	130140480	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_130019464_130022226_130022306_130042684_130042802_130049281_130049394_130051248_130051409_130052858_130052992_130055170_130055256_130057405_130057498_130060035_130060141_130066352_130066489_130068329_130068422_130070975_130071128_130078557_130078635_130083619_130083706_130086139_130086251_130092744_130092860_130094264_130094368_130104425_130104576_130120878_130120959_130133451_130133622_130133842_130133906_130139609
H1_mix_00077379	chr6	+	3646	4	FSM	ENSG00000146416.19	ENST00000629020.2	3636	4	-10	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	130.853607770923	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATTCAGTGTCCTGGCA	-8	True	NA	NA	False	AATAAA	-26	NA	143060888	143190597	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_143061067_143136834_143136991_143165081_143165184_143187387
H1_mix_00077380	chr6	+	765	5	FSM	ENSG00000112419.15	ENST00000397980.3	745	5	-20	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	135.757826662038	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACCAACAGACCTTGATG	63	False	NA	NA	False	AATAAA	-25	NA	143678047	143755499	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_143678210_143712015_143712184_143748984_143749066_143753753_143753913_143755304
H1_mix_00077394	chr6	+	4948	20	NNC	ENSG00000213079.10	novel	5127	20	NA	NA	15	-161	intron_retention	FALSE	canonical	3	13	junction_7	34.3232959177769	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTTCTAGGAATTGTAT	19	False	NA	7	True	AATAAA	-18	NA	154733430	154834060	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_+_154733931_154773988_154774073_154778000_154778046_154787860_154788023_154792822_154792977_154795008_154795140_154801970_154802148_154803546_154803624_154805368_154805487_154808069_154808202_154808685_154808799_154810014_154810209_154815715_154815817_154818478_154818593_154820176_154820334_154822275_154822410_154824233_154824379_154827171_154827241_154830921_154831141_154831938
H1_mix_00077396	chr6	+	8552	18	NIC	ENSG00000049618.24	novel	9636	20	NA	NA	-45	132	intron_retention	FALSE	canonical	3	21	junction_6	35.6625864065431	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCTGTTCAAAGACTAGTT	-9	True	NA	NA	False	NA	NA	NA	156778928	157210911	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_156779472_156829226_156829422_156901375_156901526_156935465_156935577_157084661_157084906_157110471_157110562_157148623_157148952_157167039_157167186_157174007_157174118_157180968_157181179_157184230_157184436_157189641_157189781_157190037_157190211_157196164_157196316_157198810_157198908_157200704_157201489_157203865_157203997_157206166
H1_mix_00077413	chr6	+	582	4	FSM	ENSG00000280707.3	ENST00000628362.2	582	4	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	255.565168901311	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGAGTTTGTTCTTTTTGT	6	True	NA	21	True	AATAAA	-16	NA	167228299	167237511	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_+_167228398_167231826_167231958_167232478_167232561_167237240
H1_mix_00077416	chr6	+	3045	5	NIC	ENSG00000130396.21	novel	7806	34	NA	NA	170	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	109.477166569107	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGTCAGGCAGTGGT	4244	False	NA	29	True	ATTAAA	-17	NA	167952118	167972023	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_167952188_167962432_167962568_167965756_167966271_167969113_167969199_167969781
H1_mix_00077421	chr6	+	2175	18	NIC	ENSG00000130023.16	novel	2146	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	18.6389850771409	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTAAGTCAGGATGCTTT	-2	True	NA	13	True	AGTAAA	-16	NA	169751796	169781516	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_+_169751938_169753863_169754033_169755282_169755423_169756337_169756440_169756718_169756809_169758967_169759066_169759837_169759975_169760641_169760757_169762428_169762532_169766637_169766668_169768102_169768172_169769539_169769714_169773318_169773403_169775269_169775347_169775939_169776066_169776454_169776674_169779181_169779296_169781329
H1_mix_00077427	chr6	-	633	2	FSM	ENSG00000164385.10	ENST00000653895.1	649	2	16	0	16	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAGGTATGGAGGACCGA	847	False	NA	NA	False	NA	NA	NA	2633751	2632917	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_2633404_2633604
H1_mix_00077429	chr6	-	1162	2	FSM	ENSG00000230438.8	ENST00000670540.2	1804	2	185	457	-2	0	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGTGGGTTCATATGGC	8	True	NA	NA	False	AGTAAA	-18	NA	2876422	2854658	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_2855691_2876292
H1_mix_00077431	chr6	-	1316	7	FSM	ENSG00000124570.21	ENST00000380520.6	1313	7	0	-3	0	0	multi-exon	FALSE	canonical	0	0	junction_6	173.775717521177	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAGGGCCCATTTGTG	-4	True	NA	-44	True	NA	NA	NA	2971661	2948192	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2971591
H1_mix_00077432	chr6	-	371	2	NNC	ENSG00000224846.3	novel	408	2	NA	NA	7988	0	intron_retention	FALSE	canonical	3	20	junction_1	0	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCCAGCTCTCACAAGCT	8415	False	NA	-15	True	ATTAAA	-19	NA	2990755	2989725	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_2990012_2990670
H1_mix_00077433	chr6	-	1968	5	NNC	ENSG00000137285.11	novel	1922	4	NA	NA	0	38157	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1001.43706117759	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCACTGCTGGGGGACAA	-2	True	NA	NA	False	AAAAAG	-3	NA	3227653	3185166	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_3185196_3224259_3225812_3226158_3226270_3226560_3226670_3227486
H1_mix_00077434	chr6	-	2419	10	NIC	ENSG00000137266.15	novel	1574	9	NA	NA	-7	-3375	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	26.7059895256328	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAAGGCATCTCCTTCCT	11	True	NA	NA	False	AATAAA	-20	NA	3457029	3276730	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_3276977_3283851_3283976_3285078_3285112_3286858_3287092_3289763_3289867_3298090_3298219_3323833_3324003_3410187_3410343_3415751_3415856_3455905
H1_mix_00077435	chr6	-	1405	10	FSM	ENSG00000198721.13	ENST00000380125.6	1405	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	226.886168228328	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGGTGTTTGGTAGTAGA	158	False	NA	-5	True	AATAAA	-30	NA	4135468	4115692	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_4116030_4117307_4117452_4119185_4119276_4125249_4125371_4126134_4126238_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133702_4135369
H1_mix_00077436	chr6	-	3835	15	FSM	ENSG00000124491.16	ENST00000264870.8	3828	15	0	-7	0	7	multi-exon	FALSE	canonical	2	4	junction_1	3.3956755211442	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGCAGAAGTGAATGCTT	-1	True	NA	NA	False	AATAAA	-23	NA	6320662	6144076	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_6145773_6151812_6151950_6167457_6167619_6174579_6174868_6181987_6182142_6195796_6195886_6197222_6197327_6222032_6222172_6224685_6224861_6248311_6248420_6250810_6250930_6266557_6266810_6305350_6305540_6318534_6318683_6320586
H1_mix_00077437	chr6	-	2628	4	FSM	ENSG00000239264.9	ENST00000460138.5	2704	4	77	-1	77	1	multi-exon	FALSE	canonical	3	872	junction_1	98.123504942609	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTCTTTCCTTCAATGT	NA	False	NA	-2	True	AATAAA	-18	NA	7889368	7881515	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_7883267_7884358_7884489_7885960_7886044_7888704
H1_mix_00077438	chr6	-	1911	10	FSM	ENSG00000124786.12	ENST00000648987.1	1911	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_9	25.0599281722833	1634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAGGCTGACAAGTGAG	707	False	NA	NA	False	NA	NA	NA	8435271	8412884	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_8413700_8414907_8414978_8416883_8416996_8417401_8417495_8419579_8419678_8420720_8420829_8422469_8422625_8427936_8428059_8429863_8430158_8435227
H1_mix_00077439	chr6	-	1934	11	NNC	ENSG00000124786.12	novel	3566	11	NA	NA	-12	-36	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_10	24.3	603	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGGCCTGTTAGGAACCA	3	True	NA	NA	False	NA	NA	NA	8435495	8412920	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_8413700_8414907_8414978_8416883_8416996_8417401_8417495_8419579_8419678_8420720_8420829_8422469_8422625_8427936_8428059_8429863_8430158_8434384_8434431_8435438
H1_mix_00077440	chr6	-	1915	10	NNC	ENSG00000124786.12	novel	1911	10	NA	NA	15	-36	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_9	22.3959872949058	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGGCCTGTTAGGAACCA	-24	True	NA	NA	False	NA	NA	NA	8435522	8412920	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_8413700_8414907_8414978_8416883_8416996_8417401_8417495_8419579_8419678_8420720_8420829_8422469_8422625_8427936_8428059_8429863_8430158_8435438
H1_mix_00077441	chr6	-	2807	4	NNC	ENSG00000124786.12	novel	3566	11	NA	NA	15	-11941	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	45.6143252352445	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACCTTTCTGAATTTATT	-24	True	NA	NA	False	AATAAA	-15	NA	8435522	8425014	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_8427322_8427936_8428059_8429863_8430158_8435438
H1_mix_00077442	chr6	-	910	3	ISM	ENSG00000124786.12	ENST00000644923.2	3566	11	15	18047	7	-16408	5prime_fragment	FALSE	canonical	3	79	junction_2	11.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATCAGGATATTTTATGG	19	True	NA	-14	True	AATAAA	-19	NA	8435530	8429481	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_8430158_8434384_8434431_8435342
H1_mix_00077443	chr6	-	541	5	FSM	ENSG00000137434.12	ENST00000460742.6	541	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	7.28010988928052	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCGTCTTTTGTTTTG	80	False	NA	2	True	ATTAAA	-21	NA	10694533	10671417	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_10671599_10683186_10683233_10684848_10684924_10686965_10687165_10694493
H1_mix_00077445	chr6	-	1150	2	FSM	ENSG00000272097.2	ENST00000659819.1	1150	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATCTATACTTAACTT	NA	False	NA	NA	False	AATAAA	-25	NA	10747619	10743323	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_10744315_10747460
H1_mix_00077446	chr6	-	780	5	NNC	ENSG00000197977.4	novel	3988	8	NA	NA	-193	-18981	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	15.7698287879102	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTATTTGCTTATATTTT	NA	False	NA	-6	True	AATAAA	-16	NA	11044498	10999739	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_10999919_11000086_11000165_11005371_11005560_11010745_11010810_11044227
H1_mix_00077447	chr6	-	354	1	FSM	ENSG00000244476.3	ENST00000542862.1	3184	1	1629	1201	1629	-1201	mono-exon	FALSE	NA	NA	NA	NA	NA	457	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACCCCTAGACTGCTCGC	7821	False	NA	NA	False	NA	NA	NA	11104045	11103691	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_11103700_11104000
H1_mix_00077449	chr6	-	2357	5	FSM	ENSG00000215022.8	ENST00000606150.5	2305	5	-223	171	-223	-171	multi-exon	FALSE	canonical	1	2	junction_4	1.08972473588517	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTTTAAAATTAATATTAA	7054	False	NA	NA	False	AATAAA	-2	NA	13295809	13279465	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_13281157_13281428_13281554_13294795_13294899_13295274_13295389_13295485
H1_mix_00077450	chr6	-	1082	7	NIC	ENSG00000145979.18	novel	1116	8	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	311.774491152393	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	5	True	NA	-21	True	AATAAA	-16	NA	13328517	13304950	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_13305188_13306397_13306528_13307595_13307746_13316570_13316709_13320907_13321096_13326786_13326964_13328455
H1_mix_00077451	chr6	-	1188	7	NIC	ENSG00000145979.18	novel	1282	8	NA	NA	3	-5	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	310.735149819478	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGAAATGCCTGGTGTTG	-6	True	NA	-29	True	AATAAA	-8	NA	13328528	13304958	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_13305188_13306397_13306528_13307595_13307746_13316570_13316709_13320907_13321096_13326786_13326907_13328295
H1_mix_00077452	chr6	-	1893	3	FSM	ENSG00000010017.13	ENST00000469916.1	658	3	-1235	0	-1235	0	multi-exon	FALSE	canonical	3	125	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGCATATAGTCAACATG	NA	False	NA	NA	False	NA	NA	NA	13633990	13622332	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_13622493_13625652_13625765_13632369
H1_mix_00077453	chr6	-	4175	10	NNC	ENSG00000050393.12	novel	1826	10	NA	NA	-116	5	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	147.736251475391	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTTTTCATCATTCAAAA	NA	False	NA	-16	True	AATAAA	-21	NA	13814684	13786551	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_13787965_13789381_13790865_13791877_13791993_13793893_13793948_13798832_13798905_13800340_13800383_13801287_13801390_13802242_13802347_13806924_13807045_13814014
H1_mix_00077454	chr6	-	3599	6	Intergenic	novelGene_1222	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_5	10.9068785635488	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTAAAATAAATCATTTCA	4167	False	NA	-57	True	NA	NA	NA	14298310	14290611	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_14292326_14292999_14293297_14294807_14294934_14295304_14295384_14295991_14296071_14297006
H1_mix_00077456	chr6	-	2310	4	Intergenic	novelGene_1223	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_2	11.3137084989848	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTAAAATAAATCATTTCA	28	False	NA	-57	True	NA	NA	NA	14302449	14290611	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_14292326_14292999_14293297_14295304_14295384_14302229
H1_mix_00077457	chr6	-	1302	9	NIC	ENSG00000047579.20	novel	1383	10	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	88.7657556437166	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGAGCGCACAGAGCTAG	48	True	NA	-12	True	AATAAA	-17	NA	15662970	15522806	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_15523220_15524525_15524670_15533239_15533396_15615266_15615400_15627342_15627476_15637743_15637805_15651312_15651364_15652086_15652141_15662813
H1_mix_00077458	chr6	-	698	3	Intergenic	novelGene_1229	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	1.5	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCCTCCGTCTCTCCCTC	NA	False	NA	NA	False	AGTAAA	-21	NA	15961486	15956361	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_15956673_15960935_15961020_15961183
H1_mix_00077459	chr6	-	1388	3	NNC	ENSG00000282024.1	novel	1026	2	NA	NA	54	51	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	101	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTGTTTGGTGGTCTCT	3266	False	NA	NA	False	AATAAA	-20	NA	16264499	16259049	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_16259377_16262176_16263079_16264340
H1_mix_00077460	chr6	-	604	6	FSM	ENSG00000124788.19	ENST00000675689.1	1464	6	0	860	0	-837	multi-exon	FALSE	canonical	0	0	junction_3	1.6	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGTTAACAACCAAGAAC	2737	False	NA	NA	False	NA	NA	NA	16760091	16485971	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_16486110_16522626_16522689_16585779_16585908_16657775_16657902_16753232_16753348_16760056
H1_mix_00077461	chr6	-	5834	21	NIC	ENSG00000124789.12	novel	6026	22	NA	NA	47	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_14	70.2207946409039	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGTTCTAGTTTTACC	-1	True	NA	-5	True	AATAAA	-14	NA	17706787	17615036	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_17616182_17616526_17616696_17624560_17624834_17625807_17626165_17628654_17629540_17632649_17632845_17637152_17637771_17639938_17640065_17646066_17646155_17647806_17647906_17649162_17649301_17661652_17661780_17662017_17662071_17665238_17665386_17669292_17669338_17669429_17669547_17674904_17675034_17675228_17675369_17675521_17675771_17688395_17688619_17706276
H1_mix_00077462	chr6	-	5807	38	NIC	ENSG00000137177.20	novel	5538	40	NA	NA	0	11	combination_of_known_junctions	FALSE	canonical	2	16	junction_17	12.7055201015882	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCAATTTCAGAGATGGTA	439	False	NA	-5	True	ATTAAA	-28	NA	17987463	17763681	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_17764947_17771113_17771219_17771907_17772060_17773477_17773584_17775014_17775063_17777276_17777355_17778946_17779100_17779591_17779685_17780729_17780907_17781176_17781302_17783645_17783702_17785514_17785642_17787775_17787876_17794248_17794396_17794571_17794705_17796668_17796821_17799265_17799440_17799951_17800114_17804360_17804511_17805474_17805616_17808767_17808931_17817019_17817234_17825767_17825935_17826037_17826125_17828239_17828371_17831100_17831236_17833960_17834072_17836877_17837091_17837471_17837584_17849376_17849490_17850322_17850458_17851954_17852043_17855436_17855618_17856029_17856123_17873376_17873438_17898167_17898181_17987053_17987145_17987408
H1_mix_00077464	chr6	-	3388	18	NNC	ENSG00000137177.20	novel	529	5	NA	NA	-504	-2882	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	14.6412698222156	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTCTTGTGTCTTT	NA	False	NA	1	True	NA	NA	NA	17988139	17814925	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_17815638_17817019_17817234_17825767_17825935_17826037_17826125_17828239_17828371_17831100_17831236_17833960_17834072_17836877_17837091_17837471_17837584_17849376_17849490_17850322_17850458_17851954_17852043_17855436_17855618_17856029_17856123_17873376_17873438_17898167_17898181_17987053_17987145_17987408
H1_mix_00077465	chr6	-	1873	10	NNC	ENSG00000137364.5	novel	3184	9	NA	NA	-63	51245	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	129.025502312192	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGGTTCAGCACCATCT	1009	False	NA	NA	False	NA	NA	NA	18155140	18077065	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_18077094_18129712_18130781_18132132_18132178_18133803_18133890_18138962_18139038_18139664_18139718_18143595_18143729_18147822_18147916_18148987_18149172_18155032
H1_mix_00077466	chr6	-	2824	12	NNC	ENSG00000124795.17	novel	3142	11	NA	NA	0	15233	intron_retention	FALSE	non_canonical	0	0	junction_1	478.735541826868	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATATATATATATAT	22	True	NA	NA	False	NA	NA	NA	18264497	18208626	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_18208663_18224180_18225731_18226173_18226243_18236451_18236601_18237380_18237517_18249650_18249840_18255730_18255852_18256360_18256456_18257952_18258063_18258303_18258406_18263842_18263997_18264384
H1_mix_00077467	chr6	-	3917	4	FSM	ENSG00000124795.17	ENST00000652292.1	3954	4	37	0	37	0	multi-exon	FALSE	canonical	3	70	junction_3	746.831678194997	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAAATCACTGGTGTTTT	9716	False	NA	-35	True	AATAAA	-6	NA	18246087	18224190	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_18226243_18236451_18236601_18237380_18237517_18244507
H1_mix_00077468	chr6	-	1220	3	Intergenic	novelGene_1230	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	3.5	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCGCGCATGAAAACCCAT	NA	False	NA	NA	False	NA	NA	NA	18759870	18754155	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_18754553_18757252_18757537_18759331
H1_mix_00077469	chr6	-	2682	2	Intergenic	novelGene_1232	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	68	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	NA	False	AATAAA	-22	NA	18759572	18754179	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_18754542_18757252
H1_mix_00077470	chr6	-	2679	2	Intergenic	novelGene_1234	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	90	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	NA	False	NA	NA	False	AATAAA	-16	NA	18759572	18754185	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_18754545_18757252
H1_mix_00077471	chr6	-	3661	2	NNC	ENSG00000260455.2	novel	3692	3	NA	NA	-75437	10	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTTGGGTCCTGTGAG	13	False	NA	NA	False	AATAAA	-21	NA	22222630	22133194	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_22136670_22222444
H1_mix_00077472	chr6	-	1030	11	FSM	ENSG00000112293.15	ENST00000474784.5	1030	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	1.41774468787578	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGAATGGGACCAGGTGA	123	False	NA	NA	False	NA	NA	NA	24495205	24466695	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_24466820_24466911_24466940_24467166_24467275_24472581_24472637_24473618_24473668_24475120_24475232_24476180_24476279_24479880_24479960_24486074_24486131_24489414_24489498_24494966
H1_mix_00077473	chr6	-	6414	21	FSM	ENSG00000137261.15	ENST00000378214.8	6838	21	0	424	0	-424	multi-exon	FALSE	canonical	1	2	junction_12	3.11247489949718	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGATGCCACCTTTTGTGC	-16	True	NA	NA	False	AAGAAA	-20	NA	24646191	24544530	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_24547344_24551433_24551526_24554540_24554632_24556606_24556730_24559012_24559156_24563358_24563519_24564201_24564341_24566596_24566749_24568780_24568930_24569902_24570036_24572574_24572699_24576367_24576597_24578109_24578243_24579857_24579951_24580925_24581014_24582248_24582347_24583603_24583703_24588592_24588786_24595872_24596619_24601048_24601209_24645735
H1_mix_00077474	chr6	-	1593	5	FSM	ENSG00000112308.13	ENST00000378102.3	741	5	-852	0	-852	0	multi-exon	FALSE	canonical	0	0	junction_4	1306.08068280639	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTTTTTTTTCTTGTTTT	69	False	NA	NA	False	NA	NA	NA	24720850	24706095	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_24706263_24708776_24708912_24714317_24714441_24716147_24716325_24719859
H1_mix_00077475	chr6	-	5302	23	NNC	ENSG00000111913.20	novel	5539	23	NA	NA	0	1593	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	40.8823144692621	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTGCAAAGGCCTCACAG	8	True	NA	NA	False	NA	NA	NA	24935948	24802688	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_24802714_24804289_24806474_24809716_24809808_24818541_24818626_24825225_24825429_24828136_24828296_24830508_24830671_24832255_24832392_24835702_24835872_24839090_24839273_24842861_24843555_24848024_24848155_24849801_24849951_24850596_24850723_24852574_24852619_24860972_24861037_24865300_24865451_24869093_24869148_24870865_24870890_24872880_24872960_24873643_24873800_24875690_24875818_24935837
H1_mix_00077476	chr6	-	453	1	FSM	ENSG00000278463.2	ENST00000615868.2	527	1	72	2	72	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGACTTCCATTAAATGAGC	70	False	NA	NA	False	NA	NA	NA	26033546	26033093	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_26033100_26033500
H1_mix_00077478	chr6	-	1095	1	FSM	ENSG00000197409.8	ENST00000356476.3	503	1	20	-612	20	612	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCACAGCACTTTAGGAT	7731	False	NA	NA	False	NA	NA	NA	26197266	26196171	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_26196200_26197300
H1_mix_00077479	chr6	-	4737	3	FSM	ENSG00000181315.11	ENST00000607204.5	4737	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	73	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACTCCATTTCCGTCTC	-6	True	NA	-10	True	AATAAA	-12	NA	26659752	26634392	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_26638729_26658557_26658647_26659440
H1_mix_00077480	chr6	-	5188	8	NIC	ENSG00000241549.8	novel	1203	9	NA	NA	-374	3685	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	21.4209510259732	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTTAGTCTGTCTCTTC	NA	False	NA	-7	True	AATAAA	-16	NA	26956928	26867798	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_26871580_26872123_26872251_26878699_26878836_26883342_26883518_26885358_26885444_26889009_26889198_26925119_26925276_26956388
H1_mix_00077481	chr6	-	1706	3	Intergenic	novelGene_1253	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	23	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCCTTATAGTAGAATGAT	NA	False	NA	-12	True	AATAAA	-15	NA	27050513	26983641	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_26984798_26992350_26992609_27050221
H1_mix_00077482	chr6	-	1452	1	FSM	ENSG00000287966.1	ENST00000661000.1	1346	1	-41	-65	-41	65	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATCTTAGTTATTGTGAA	-23	True	NA	NA	False	NA	NA	NA	27020321	27018869	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_27018900_27020300
H1_mix_00077483	chr6	-	1154	1	FSM	ENSG00000220581.1	ENST00000403778.1	876	1	-209	-69	-209	69	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCATATGTCAGAGTATTAA	NA	False	NA	NA	False	NA	NA	NA	27034519	27033365	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_27033400_27034500
H1_mix_00077484	chr6	-	1239	3	NNC	ENSG00000124635.9	novel	408	2	NA	NA	0	264	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	3.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCAGGACTGTATTATTT	-1	True	NA	NA	False	AATATA	-21	NA	27132795	27125632	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_27126463_27127263_27127402_27132524
H1_mix_00077486	chr6	-	2784	5	NNC	ENSG00000204789.5	novel	4164	5	NA	NA	-5	22	at_least_one_novel_splicesite	TRUE	canonical	3	14	junction_4	67.5074070010099	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTTATTACCCTTGCAT	-1	True	NA	1	True	AATAAA	-28	NA	27375236	27357808	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_27360222_27363178_27363303_27367516_27367613_27370135_27370244_27375193
H1_mix_00077487	chr6	-	279	1	NIC	ENSG00000219738.2	novel	572	2	NA	NA	381	-263	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCTCAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	27561363	27561084	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_27561100_27561400
H1_mix_00077488	chr6	-	384	1	FSM	ENSG00000217646.1	ENST00000402707.1	340	1	-133	89	-133	-89	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGGGAGATCCAGACGGC	8998	False	NA	NA	False	NA	NA	NA	27864534	27864150	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_27864200_27864500
H1_mix_00077489	chr6	-	390	1	FSM	ENSG00000184357.5	ENST00000331442.5	797	1	32	375	32	-375	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCCAAGAAGGCAGGCGC	5976	False	NA	NA	False	TTTAAA	-37	NA	27867556	27867166	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_27867200_27867600
H1_mix_00077490	chr6	-	255	1	FSM	ENSG00000275379.2	ENST00000616365.2	502	1	5	242	5	-242	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACTTTAAGACCGATCTG	3	True	NA	NA	False	NA	NA	NA	27872341	27872086	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_27872100_27872300
H1_mix_00077491	chr6	-	992	1	FSM	ENSG00000176933.5	ENST00000469761.1	992	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTCTACCTGCCCTGGGGC	NA	False	NA	NA	False	NA	NA	NA	28218634	28217642	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_28217600_28218600
H1_mix_00077492	chr6	-	417	1	FSM	ENSG00000273712.1	ENST00000615674.1	271	1	-171	25	-171	-25	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTGGCCATGTAGAAGAG	NA	False	NA	NA	False	NA	NA	NA	28316054	28315637	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_28315600_28316100
H1_mix_00077493	chr6	-	4412	3	NNC	ENSG00000187987.10	novel	1316	4	NA	NA	3	10348	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	8.5	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCAAGATGGTGTGTTCT	-3	True	NA	-10	True	GATAAA	-11	NA	28443488	28421581	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_28423841_28424342_28426406_28443398
H1_mix_00077494	chr6	-	3605	3	Intergenic	novelGene_1264	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATTGTGTGTGTGTCTTTT	27	False	NA	0	True	GATAAA	-19	NA	28776028	28746036	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_28747555_28757269_28759067_28775738
H1_mix_00077495	chr6	-	709	2	FSM	ENSG00000225173.2	ENST00000457253.2	1390	2	52	629	52	-629	multi-exon	FALSE	canonical	3	13	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCCACAGTGCTGGGATT	9	True	NA	NA	False	NA	NA	NA	28839006	28837868	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_28838321_28838749
H1_mix_00077496	chr6	-	805	1	Intergenic	novelGene_1267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATGGTGGTTGAGTTGCT	NA	False	NA	-2	True	AATAAA	-29	NA	28902102	28901297	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_28901300_28902100
H1_mix_00077498	chr6	-	4032	22	NIC	ENSG00000204681.11	novel	4212	23	NA	NA	39	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_18	35.2615751889682	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCAGTCTTCCTGTGAA	5	True	NA	-1	True	AATAAA	-24	NA	29632895	29602227	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_29603717_29604493_29604638_29604859_29604989_29605568_29605697_29606390_29606485_29606896_29607005_29607101_29607219_29608600_29608734_29610923_29611002_29612550_29612615_29613242_29613486_29621100_29621293_29621751_29621818_29622103_29622206_29623304_29623476_29623889_29624025_29627485_29627647_29629086_29629108_29630521_29630644_29631395_29631600_29632300_29632386_29632849
H1_mix_00077499	chr6	-	4286	21	FSM	ENSG00000204681.11	ENST00000472823.5	4286	21	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_18	35.0127119772234	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCAGTCTTCCTGTGAA	-1	True	NA	-1	True	AATAAA	-24	NA	29633131	29602227	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_29603717_29604493_29604638_29604859_29604989_29605568_29605697_29606390_29606485_29606896_29607005_29607101_29607219_29608600_29608734_29610923_29611002_29612550_29612615_29613242_29613486_29621100_29621293_29621751_29621818_29622103_29622206_29623304_29623476_29623889_29624025_29627485_29627647_29629086_29629248_29631395_29631600_29632300_29632386_29632849
H1_mix_00077500	chr6	-	4535	23	FSM	ENSG00000204681.11	ENST00000377034.9	4525	23	0	-10	0	0	multi-exon	TRUE	canonical	2	5	junction_19	40.2395974956456	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCAGTCTTCCTGTGAA	-53	True	NA	-1	True	AATAAA	-24	NA	29633183	29602227	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_29603717_29604493_29604638_29604859_29604989_29605568_29605697_29606390_29606485_29606896_29607005_29607101_29607219_29608600_29608734_29609228_29609380_29610923_29611002_29612550_29612615_29613242_29613486_29621100_29621293_29621751_29621818_29622103_29622206_29623304_29623476_29623889_29624025_29627485_29627647_29629086_29629108_29630457_29630644_29631395_29631600_29632300_29632386_29632849
H1_mix_00077506	chr6	-	666	2	NIC	ENSG00000214922.9	novel	1905	6	NA	NA	21	-2	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTCACTCTTTCTCTTC	-5	True	NA	-3	True	ATTAAA	-15	NA	29749028	29726602	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_29727140_29748899
H1_mix_00077507	chr6	-	4496	6	NIC	ENSG00000214922.9	novel	2835	6	NA	NA	22	-1342	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	4.38178046004133	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCTGTGACTCAGACATT	-4	True	NA	NA	False	ATTAAA	-14	NA	29749027	29736369	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_29736821_29737965_29738202_29738334_29738456_29738550_29741856_29745472_29745728_29748899
H1_mix_00077508	chr6	-	1847	1	FSM	ENSG00000176998.4	ENST00000418983.1	998	1	-127	-722	-127	722	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGCTGCTTTCGAATTC	NA	False	NA	1	True	ATTAAA	-29	NA	29792877	29791030	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_29791000_29792900
H1_mix_00077509	chr6	-	283	1	FSM	ENSG00000213880.3	ENST00000453429.1	797	1	284	230	284	-230	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGACATCTAGTCCATAGG	NA	False	NA	NA	False	CATAAA	-40	NA	29803707	29803424	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_29803400_29803700
H1_mix_00077512	chr6	-	5239	9	NIC	ENSG00000234127.9	novel	3518	10	NA	NA	14	6	intron_retention	FALSE	canonical	3	88	junction_7	16.790994610207	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGATCTGTATTTGTAGGT	781	False	NA	NA	False	AATAAA	-22	NA	30213351	30184448	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_30186559_30189166_30189200_30189417_30189534_30190012_30190036_30196515_30196747_30198428_30198525_30198665_30201139_30204655_30204766_30213304
H1_mix_00077513	chr6	-	4375	6	FSM	ENSG00000231074.10	ENST00000654996.1	4356	6	0	-19	0	0	multi-exon	FALSE	canonical	2	10	junction_1	106.969902309014	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCTAGCCTGGTGAAGGA	2718	False	NA	NA	False	NA	NA	NA	30326701	30286727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30289495_30291536_30291983_30294470_30294965_30296131_30296238_30314268_30314483_30326353
H1_mix_00077514	chr6	-	6537	4	FSM	ENSG00000231074.10	ENST00000658695.1	6537	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	112.11402925395	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTTGGGAGGCCAAGGC	2056	False	NA	NA	False	AATACA	-39	NA	30327363	30286805	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30292600_30294470_30294965_30296131_30296238_30327220
H1_mix_00077515	chr6	-	4619	4	ISM	ENSG00000231074.10	ENST00000670071.1	3812	5	-409	4578	14	-59	5prime_fragment	FALSE	canonical	3	15	junction_3	123.986558411251	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTAAAAGCCTCTACTTA	2624	False	NA	NA	False	NA	NA	NA	30326795	30291310	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_30294965_30296131_30296238_30314268_30314483_30326150
H1_mix_00077516	chr6	-	1419	3	FSM	ENSG00000231074.10	ENST00000454269.6	1419	3	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	28.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTATTTAAGGAACTAAAAC	10	True	NA	-62	True	NA	NA	NA	30326344	30291480	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30292600_30296131_30296238_30326150
H1_mix_00077517	chr6	-	2890	1	FSM	ENSG00000231074.10	ENST00000602516.1	2890	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTAAGTCTGAATTATTA	4086	False	NA	NA	False	AATAAA	-22	NA	30306960	30304070	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30304100_30307000
H1_mix_00077518	chr6	-	1253	2	NNC	ENSG00000231074.10	novel	4605	4	NA	NA	15	-20272	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTATGGCCTTTGAAAG	3100	False	NA	NA	False	AATAAA	-25	NA	30326319	30324346	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_30325289_30326008
H1_mix_00077519	chr6	-	985	5	NNC	ENSG00000204560.10	novel	3406	20	NA	NA	-2	-2909	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	82.0712343028908	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCATTACCCTCAAAATAA	17	True	NA	-18	True	AATAAA	-7	NA	30672990	30668038	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_30668209_30670409_30670467_30670789_30670953_30671035_30671275_30672634
H1_mix_00077520	chr6	-	6593	16	NNC	ENSG00000137337.16	novel	6968	15	NA	NA	4	0	intron_retention	FALSE	canonical	2	3	junction_15	87.7829140550711	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTAGTGTAGTTTTTTA	22	True	NA	-19	True	AATAAA	-19	NA	30717277	30699806	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_30700633_30702552_30702664_30702751_30702878_30703103_30703287_30703417_30703538_30703620_30706099_30707383_30707455_30708135_30708358_30711411_30711502_30711666_30711727_30711873_30713355_30713647_30713718_30713802_30714184_30715039_30715179_30716881_30717084_30717244
H1_mix_00077522	chr6	-	856	6	FSM	ENSG00000137312.15	ENST00000413165.5	856	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_5	263.770051370507	1285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAATGTCCCCTCCCTGAC	2238	False	NA	NA	False	NA	NA	NA	30742307	30730918	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_30731101_30740157_30740311_30740495_30740592_30740678_30740799_30741189_30741334_30742146
H1_mix_00077523	chr6	-	2713	5	NNC	ENSG00000237923.1	novel	799	3	NA	NA	0	2036	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	69.9321099352794	31	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGCATAAAGAAACGTTGG	88	False	NA	NA	False	AATAAA	-28	NA	30848159	30837489	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_30839464_30839822_30840020_30843377_30843615_30847036_30847150_30847967
H1_mix_00077524	chr6	-	1106	5	NNC	ENSG00000237923.1	novel	799	3	NA	NA	21	447	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	70.3651191997853	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTTATTTTCAATTTTT	109	False	NA	-7	True	AATAAA	-17	NA	30848138	30839078	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_30839464_30839822_30840020_30843377_30843618_30847036_30847150_30847967
H1_mix_00077526	chr6	-	1556	9	Fusion	ENSG00000234745.13_ENSG00000204525.18	novel	1542	8	NA	NA	0	14	intron_retention	TRUE	canonical	0	0	junction_7	311.899397843279	355	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGAGTCTGTTGCAGGT	-3	True	NA	4	True	AATAAA	-35	NA	31357179	31268734	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr6_-_31269174_31269337_31269386_31269492_31269526_31269965_31270086_31270209_31270486_31271072_31271349_31271598_31271853_31356941_31356958_31357085
H1_mix_00077528	chr6	-	810	4	FSM	ENSG00000227507.3	ENST00000429299.3	893	4	63	20	45	-20	multi-exon	FALSE	canonical	1	1	junction_2	0.942809041582063	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCAGTGCTGCCGATAAA	5744	False	NA	-24	True	AATAAA	-10	NA	31582361	31580577	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31581164_31581558_31581631_31581813_31581860_31582255
H1_mix_00077530	chr6	-	3750	26	NIC	ENSG00000204463.14	novel	3920	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_14	93.9502336346217	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	8404	False	NA	-13	True	AATAAA	-31	NA	31652358	31639027	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644228_31644306_31644415_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652246
H1_mix_00077531	chr6	-	3606	25	NIC	ENSG00000204463.14	novel	3644	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_13	87.0696460535409	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	8404	False	NA	-13	True	AATAAA	-31	NA	31652358	31639027	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643975_31644081_31644195_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652246
H1_mix_00077532	chr6	-	3466	24	NIC	ENSG00000204463.14	novel	3644	25	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_12	91.5786356244487	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	8397	False	NA	-13	True	AATAAA	-31	NA	31652365	31639027	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_31639227_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643975_31644081_31644195_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652246
H1_mix_00077533	chr6	-	3497	25	NIC	ENSG00000204463.14	novel	3843	26	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	112	junction_24	87.1502434337137	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	8300	False	NA	-13	True	AATAAA	-31	NA	31652462	31639027	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_31639227_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644306_31644415_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652423
H1_mix_00077534	chr6	-	3678	26	NIC	ENSG00000204463.14	novel	3843	26	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_25	103.236846135476	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	8287	False	NA	-13	True	AATAAA	-31	NA	31652475	31639027	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643975_31644081_31644195_31644306_31644415_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652399
H1_mix_00077535	chr6	-	3573	25	NIC	ENSG00000204463.14	novel	3779	25	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_24	78.9976155582489	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	8287	False	NA	-13	True	AATAAA	-31	NA	31652475	31639027	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652399
H1_mix_00077536	chr6	-	3681	26	NIC	ENSG00000204463.14	novel	3843	26	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_25	90.1381162439065	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	8287	False	NA	-13	True	AATAAA	-31	NA	31652475	31639027	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644306_31644415_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652399
H1_mix_00077537	chr6	-	3474	24	NIC	ENSG00000204463.14	novel	3779	25	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_23	85.1544576843518	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	11	True	NA	-13	True	AATAAA	-31	NA	31652636	31639027	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_31639227_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652512
H1_mix_00077538	chr6	-	3506	25	NIC	ENSG00000204463.14	novel	3843	26	NA	NA	36	-1	combination_of_known_junctions	FALSE	canonical	3	23	junction_24	108.3061504358	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTGTCTCCATTAGGTA	10	True	NA	-15	True	AATAAA	-29	NA	31652287	31639029	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_31639227_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643975_31644081_31644195_31644306_31644415_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652234
H1_mix_00077540	chr6	-	1051	7	FSM	ENSG00000204463.14	ENST00000428326.5	1051	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	119.623599492556	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGAGAGATGGAGGGAAT	14	True	NA	NA	False	NA	NA	NA	31652153	31647592	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31651901
H1_mix_00077541	chr6	-	2627	4	FSM	ENSG00000204438.11	ENST00000375906.5	2793	4	75	91	75	-91	multi-exon	FALSE	canonical	3	15	junction_3	74.7187318474349	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCCACGATTATCAAGCT	2394	False	NA	NA	False	NA	NA	NA	31666208	31661319	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31662711_31663852_31664578_31664840_31665004_31665860
H1_mix_00077542	chr6	-	1707	4	NNC	ENSG00000204438.11	novel	1814	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	80.8551516945925	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAGCTATTTTGAGGAA	9	True	NA	-8	True	AATAAA	-28	NA	31665850	31662075	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_31662711_31663852_31664581_31664840_31664907_31665572
H1_mix_00077543	chr6	-	369	2	FSM	ENSG00000204428.12	ENST00000461572.1	369	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCTGAGGTGCGGTCAG	NA	False	NA	NA	False	NA	NA	NA	31681960	31681347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31681402_31681645
H1_mix_00077544	chr6	-	4138	31	NNC	ENSG00000204394.13	novel	4111	30	NA	NA	0	68454	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	164.275459721368	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGCGTGGTGGCTCACA	-53	True	NA	NA	False	AAAAAG	-1	NA	31795752	31709063	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_31709091_31777517_31777663_31778966_31779293_31779424_31779537_31779607_31779815_31779997_31780154_31780440_31780569_31780704_31780784_31780869_31780939_31781018_31781124_31781480_31781607_31781690_31781762_31781846_31781953_31782086_31782178_31782284_31782444_31782529_31782634_31782720_31782846_31783095_31783187_31784213_31784309_31784393_31784503_31784594_31784715_31785245_31785328_31785568_31785734_31791609_31791738_31791870_31791972_31792216_31792302_31792391_31792517_31792756_31792896_31792985_31793121_31794830_31795251_31795545
H1_mix_00077545	chr6	-	2899	12	Fusion	ENSG00000213722.10_ENSG00000213719.8	novel	1330	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	53	junction_6	1220.59717128357	581	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGGCTGTGACTGGTGT	1487	False	NA	-7	True	AATAAA	-18	NA	31736567	31727039	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr6_-_31727354_31727542_31727693_31728172_31728293_31728450_31728525_31728645_31728746_31728864_31729222_31730050_31731004_31732216_31732399_31733565_31733673_31733835_31733962_31734153_31734264_31736261
H1_mix_00077546	chr6	-	641	4	FSM	ENSG00000204392.11	ENST00000470083.5	641	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	444.697899952566	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTGGTTCTGTTA	24	True	NA	-6	True	AATAAA	-15	NA	31806817	31797395	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31797883_31797989_31798050_31798476_31798508_31806754
H1_mix_00077547	chr6	-	2746	2	FSM	ENSG00000204390.10	ENST00000375654.5	2762	2	16	0	16	0	multi-exon	FALSE	canonical	3	9	junction_1	0	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAATTTTCATGAACTCA	-2	True	NA	0	True	ATTAAA	-18	NA	31815267	31809618	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31811986_31814888
H1_mix_00077548	chr6	-	1875	6	FSM	ENSG00000204386.12	ENST00000491768.5	1875	6	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_2	114.45802724143	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCCCTCTTTTTTTGTTG	6	True	NA	-4	True	NA	NA	NA	31862822	31859051	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31859946_31860041_31860179_31860438_31860622_31861187_31861451_31861998_31862192_31862617
H1_mix_00077549	chr6	-	2338	5	FSM	ENSG00000204386.12	ENST00000678869.1	2338	5	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_2	127.114121953464	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAATGAATATTTGTAGAG	-1	True	NA	-43	True	AATGAA	-2	NA	31862884	31859216	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_31859946_31860041_31860179_31860438_31861451_31861998_31862192_31862617
H1_mix_00077550	chr6	-	3891	27	NIC	ENSG00000204371.11	novel	3965	28	NA	NA	0	4	intron_retention	FALSE	canonical	3	88	junction_9	212.940587458057	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTTGTGTTGGGGTGGG	4	True	NA	NA	False	AATAAA	-24	NA	31897687	31879754	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_31880265_31880672_31880849_31881013_31881093_31882698_31882786_31882893_31883010_31883361_31883440_31883805_31883951_31884391_31884560_31884644_31884800_31884890_31885017_31886580_31886683_31886774_31886898_31886994_31887102_31887576_31887660_31887778_31887962_31888040_31888277_31888362_31888507_31888598_31888748_31889227_31889343_31889467_31889603_31892406_31892563_31892693_31892735_31892825_31892911_31896262_31896517_31896605_31896825_31896922_31896990_31897635
H1_mix_00077551	chr6	-	1201	10	NIC	ENSG00000204356.14	novel	1445	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_5	242.694493724004	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATCTCCCTCAGCCTCTG	-6	True	NA	-30	True	AGTAAA	-20	NA	31958446	31952227	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_31952399_31953728_31953832_31954079_31954135_31954297_31954443_31954554_31954878_31955058_31955097_31955218_31955294_31956692_31956839_31956940_31957011_31958371
H1_mix_00077553	chr6	-	1906	4	FSM	ENSG00000204314.12	ENST00000211413.10	1892	4	0	-14	0	10	multi-exon	FALSE	canonical	1	1	junction_3	11.4406682011537	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAAAGACTGCGGCCCCG	-14	True	NA	-21	True	ATTAAA	-28	NA	32151939	32148348	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32149399_32149536_32149723_32150367_32150907_32151808
H1_mix_00077554	chr6	-	543	2	FSM	ENSG00000284954.1	ENST00000497552.5	543	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAGGTCGACTCAGGAGC	456	False	NA	-5	True	AATAAA	-19	NA	32153908	32152801	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32153173_32153736
H1_mix_00077556	chr6	-	1479	2	ISM	ENSG00000204301.6	ENST00000474612.1	5267	10	7676	0	483	0	3prime_fragment	FALSE	canonical	2	5	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTTTTGGAGGAATTGG	NA	False	NA	0	True	AATAAA	-18	NA	32196494	32194842	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_32196151_32196323
H1_mix_00077557	chr6	-	849	4	FSM	ENSG00000204267.17	ENST00000464100.1	849	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	1.63299316185545	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGGAGGGCAAGCTGCAG	8038	False	NA	NA	False	NA	NA	NA	32830727	32828943	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32829035_32829399_32829537_32829929_32830090_32830266
H1_mix_00077558	chr6	-	1347	6	FSM	ENSG00000242574.9	ENST00000418107.3	1348	6	0	1	0	-1	multi-exon	TRUE	canonical	0	0	junction_2	4.16653333119993	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGTTTTTCCATGTCTT	6	True	NA	-9	True	AATAAA	-12	NA	32941028	32934636	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32934988_32935341_32935378_32935535_32935653_32937171_32937457_32938683_32938966_32940752
H1_mix_00077560	chr6	-	778	4	FSM	ENSG00000204257.15	ENST00000395305.7	777	4	0	-1	0	1	multi-exon	FALSE	canonical	1	3	junction_3	63.3578899760892	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTTCTTTCTTAACTC	4	True	NA	-15	True	AATAAA	-20	NA	32953061	32948611	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_32948869_32949270_32949400_32949610_32949890_32952948
H1_mix_00077561	chr6	-	1003	5	NIC	ENSG00000204257.15	novel	1093	5	NA	NA	12	-12	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	49.12420482817	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTTCTTTATATCAGTG	43	True	NA	-33	True	AATAAA	-2	NA	32953022	32948629	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_32948869_32949273_32949400_32949610_32949890_32950518_32950804_32952948
H1_mix_00077562	chr6	-	1436	6	NIC	ENSG00000231389.8	novel	1704	6	NA	NA	-11	-9	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	11.9565881421081	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCGGGGAGACTCTGAGTC	NA	False	NA	-10	True	AATAAA	-16	NA	33080786	33065015	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_33065348_33068637_33068805_33069018_33069301_33069640_33069887_33073470_33073773_33080679
H1_mix_00077563	chr6	-	3202	26	ISM	ENSG00000204248.12	ENST00000341947.7	6422	66	20364	5	-4589	-4	3prime_fragment	FALSE	canonical	3	15	junction_24	3.45577777063283	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGGTGTCTGTGTCACT	5474	False	NA	-7	True	NA	NA	NA	33172103	33162698	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_33163819_33164266_33164474_33164851_33164965_33165548_33165817_33165930_33165985_33166170_33166207_33166512_33166567_33166719_33166828_33167069_33167124_33167263_33167318_33167425_33167534_33167798_33167853_33168518_33168573_33168705_33168760_33168954_33169009_33169382_33169491_33169830_33169885_33170046_33170101_33170325_33170380_33170556_33170611_33170809_33170918_33171113_33171168_33171270_33171325_33171466_33171575_33171712_33171821_33172049
H1_mix_00077564	chr6	-	513	2	FSM	ENSG00000272217.1	ENST00000606432.1	594	2	0	81	0	-81	multi-exon	FALSE	canonical	2	4	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTAGTTACCTTTATTCT	2379	False	NA	NA	False	NA	NA	NA	33246856	33246155	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33246551_33246738
H1_mix_00077566	chr6	-	2811	18	NIC	ENSG00000237441.10	novel	2896	18	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_17	75.0721452312333	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCTGTCCTTGCAGTAC	1	True	NA	-6	True	AATAAA	-23	NA	33297985	33291653	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_33292314_33292429_33292545_33293015_33293307_33293412_33293525_33293603_33293700_33293794_33293917_33294033_33294067_33294687_33294763_33294976_33295046_33295126_33295212_33295318_33295423_33295507_33295760_33296027_33296326_33296413_33296465_33296597_33296777_33297031_33297116_33297213_33297344_33297930
H1_mix_00077567	chr6	-	2899	17	ISM	ENSG00000237441.10	ENST00000497454.6	2896	18	215	0	83	0	3prime_fragment	FALSE	canonical	3	147	junction_16	42.6606797150491	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCTGTCCTTGCAGTAC	3	True	NA	-6	True	AATAAA	-23	NA	33298727	33291653	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_33292314_33292429_33292545_33293015_33293307_33293412_33293525_33293603_33293700_33293794_33293917_33294033_33294067_33294687_33294763_33294976_33295046_33295126_33295212_33295318_33295423_33295507_33295760_33296027_33296326_33296413_33296465_33296597_33296777_33297031_33297116_33298454
H1_mix_00077568	chr6	-	2313	7	FSM	ENSG00000204209.13	ENST00000414083.6	2355	7	43	-1	-14	0	multi-exon	FALSE	canonical	1	4	junction_6	387.730755665435	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGTCTTTTTCTTGTCC	-37	True	NA	0	True	AATAAA	-25	NA	33322973	33318557	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33318803_33318996_33319220_33319379_33319855_33320010_33320225_33320379_33320592_33320735_33321568_33322861
H1_mix_00077569	chr6	-	498	1	FSM	ENSG00000204194.1	ENST00000374520.1	498	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCACAAAGGAAAATATTTCA	87	False	NA	NA	False	NA	NA	NA	33400556	33400058	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33400100_33400600
H1_mix_00077570	chr6	-	739	7	FSM	ENSG00000112514.18	ENST00000494751.5	731	7	0	-8	0	0	multi-exon	FALSE	canonical	1	4	junction_6	991.521558010717	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTGTTTTTTGTCAT	2	True	NA	-11	True	AATAAA	-24	NA	33418058	33416541	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_33416661_33416748_33416777_33416919_33416970_33417096_33417143_33417250_33417311_33417480_33417817_33417958
H1_mix_00077573	chr6	-	804	7	NNC	ENSG00000124614.16	novel	781	6	NA	NA	0	1618	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4572.43330550959	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGCATGGTGGTGCTCA	7	True	NA	NA	False	NA	NA	NA	34426026	34415835	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_34415863_34417453_34417544_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34425795
H1_mix_00077574	chr6	-	609	7	NNC	ENSG00000124614.16	novel	588	6	NA	NA	0	1618	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4337.58799142258	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGCATGGTGGTGCTCA	0	True	NA	NA	False	NA	NA	NA	34426067	34415835	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_34415863_34417453_34417544_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34426031
H1_mix_00077575	chr6	-	715	8	NNC	ENSG00000124614.16	novel	671	7	NA	NA	0	1618	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4512.97173010586	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGCATGGTGGTGCTCA	-2	True	NA	NA	False	NA	NA	NA	34426069	34415835	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_34415863_34417453_34417548_34417797_34417898_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34426031
H1_mix_00077576	chr6	-	563	5	ISM	ENSG00000124614.16	ENST00000464218.5	615	6	346	0	346	0	3prime_fragment	FALSE	canonical	3	7266	junction_1	1257.28417631019	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTCCATTTTGTTTG	854	False	NA	-10	True	AATAAA	-22	NA	34425234	34417453	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_34417548_34418368_34418425_34421729_34421808_34424668_34424841_34425071
H1_mix_00077578	chr6	-	1407	5	FSM	ENSG00000124614.16	ENST00000644700.1	1407	5	0	0	0	0	multi-exon	FALSE	canonical	3	6754	junction_4	1438.83129657372	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTCCATTTTGTTTG	0	True	NA	-10	True	AATAAA	-22	NA	34426067	34417453	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34426031
H1_mix_00077579	chr6	-	1847	5	FSM	ENSG00000124664.11	ENST00000544425.2	1866	5	16	3	12	-3	multi-exon	FALSE	canonical	0	0	junction_2	1.73205080756888	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATGTCCCCAGTGTCTG	20	True	NA	NA	False	AATAAA	-14	NA	34556317	34537804	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_34538453_34539249_34539397_34540983_34541182_34544019_34544485_34555928
H1_mix_00077580	chr6	-	4235	1	FSM	ENSG00000272374.1	ENST00000605896.1	4261	1	26	0	26	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTCACTAAGTGTACAG	NA	False	NA	-7	True	AATAAA	-18	NA	35224604	35220369	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_35220400_35224600
H1_mix_00077581	chr6	-	2973	12	NIC	ENSG00000007866.22	novel	2986	13	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	42.8720949910967	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTGTGTGCCAGACCTT	0	True	NA	0	True	ATTAAA	-29	NA	35497078	35473596	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_35475158_35475335_35475489_35475565_35475707_35475918_35476093_35476301_35476436_35477310_35477373_35478274_35478325_35478433_35478572_35480311_35480375_35484559_35484625_35486460_35486712_35496897
H1_mix_00077582	chr6	-	1299	9	NNC	ENSG00000112041.13	novel	492	6	NA	NA	0	1919	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	9.05193349511584	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGCCAACCACAGCACATC	-4	True	NA	-15	True	AATAAA	-17	NA	35512896	35507804	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_35508244_35509208_35509313_35509633_35509751_35509826_35509929_35510860_35511011_35511647_35511807_35512179_35512271_35512638_35512691_35512811
H1_mix_00077585	chr6	-	1435	6	FSM	ENSG00000010030.14	ENST00000538992.3	1434	6	0	-1	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0.894427190999916	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTTCTTTTATTTTT	-32	True	NA	NA	False	AATAAA	-16	NA	36387800	36366193	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_36366763_36366874_36366976_36368928_36369072_36371329_36371561_36373452_36373579_36387535
H1_mix_00077586	chr6	-	2260	14	NNC	ENSG00000112079.9	novel	3585	14	NA	NA	48	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	45.6987822400647	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTGGAAATACGTGGTGT	15	True	NA	-11	True	AATAAA	-14	NA	36547431	36493891	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_36494638_36496710_36496806_36497779_36497876_36498362_36498487_36499872_36499991_36506582_36506645_36507499_36507603_36515337_36515493_36517716_36517841_36521733_36521818_36524340_36524464_36525590_36525643_36540071_36540208_36547189
H1_mix_00077587	chr6	-	435	1	FSM	ENSG00000281450.1	ENST00000629595.1	1506	1	881	190	881	-190	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGGAGAGACCCCGGCTCC	5938	False	NA	NA	False	AATAGA	-32	NA	36674245	36673810	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_36673800_36674200
H1_mix_00077588	chr6	-	381	1	FSM	ENSG00000285244.1	ENST00000643333.1	951	1	607	-37	607	37	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTCTATCCGCTCCCA	8066	False	NA	NA	False	NA	NA	NA	36677952	36677571	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_36677600_36678000
H1_mix_00077589	chr6	-	629	4	FSM	ENSG00000137409.20	ENST00000471737.1	629	4	0	0	0	0	multi-exon	FALSE	canonical	3	3050	junction_1	146.411141045421	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTCCAGATGTGGGGT	1833	False	NA	NA	False	NA	NA	NA	36970916	36968759	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_36968975_36970038_36970115_36970405_36970474_36970646
H1_mix_00077590	chr6	-	3053	1	FSM	ENSG00000235033.7	ENST00000607215.1	3053	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTGCAGCACGGACTGT	NA	False	NA	NA	False	ATTAAA	-23	NA	39886568	39883515	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_39883500_39886600
H1_mix_00077592	chr6	-	1613	8	FSM	ENSG00000124602.10	ENST00000373164.1	1620	8	7	0	7	0	multi-exon	FALSE	canonical	1	1	junction_7	1.57790871674104	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGCGGGCAGGGCCGGA	4197	False	NA	NA	False	NA	NA	NA	41035128	41028370	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_41028596_41030387_41030502_41030654_41030756_41031680_41031749_41032035_41032138_41032883_41033147_41033880_41034182_41034689
H1_mix_00077593	chr6	-	1191	5	FSM	ENSG00000161911.12	ENST00000373127.8	1194	5	0	3	0	-3	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCTTAATGGCTGAATG	3	True	NA	NA	False	AATAAA	-18	NA	41154337	41149344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_41149919_41150818_41150908_41151281_41151385_41153757_41154091_41154245
H1_mix_00077594	chr6	-	3713	5	FSM	ENSG00000112195.9	ENST00000483722.2	3785	5	72	0	72	0	multi-exon	FALSE	canonical	0	0	junction_3	0.82915619758885	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGGTGTCCACGCTCCT	2	True	NA	NA	False	ATTAAA	-18	NA	41201077	41189748	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_41192507_41192800_41192902_41194424_41194834_41198108_41198430_41200953
H1_mix_00077595	chr6	-	414	2	FSM	ENSG00000234753.6	ENST00000414386.6	453	2	34	5	-7	5	multi-exon	FALSE	canonical	3	11	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCATTGATATCGCCAGAC	-7	True	NA	-5	True	ATTAAA	-23	NA	41546176	41523899	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_41524226_41546088
H1_mix_00077596	chr6	-	479	4	FSM	ENSG00000164663.15	ENST00000423567.1	752	4	273	0	-22	0	multi-exon	FALSE	canonical	0	0	junction_3	5.09901951359278	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCCATCCTGAACCCTCA	1189	False	NA	NA	False	NA	NA	NA	41894182	41806938	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_41807012_41871563_41871638_41891793_41891876_41893932
H1_mix_00077597	chr6	-	2237	5	FSM	ENSG00000112576.13	ENST00000372987.8	2233	5	0	-4	0	0	multi-exon	FALSE	canonical	0	0	junction_4	109.097433517017	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTTTGGCTTCTTGGAT	-4	True	NA	-20	True	AATAAA	-19	NA	41941519	41934951	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_41936108_41936558_41936696_41937234_41937395_41940369_41940586_41940951
H1_mix_00077598	chr6	-	3524	1	FSM	ENSG00000261068.2	ENST00000562471.2	2027	1	-1499	2	-1499	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCATGGCTAGAGGTGAGT	9383	False	NA	-3	True	AATAAA	-19	NA	42095758	42092234	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_42092200_42095800
H1_mix_00077599	chr6	-	7332	18	NNC	ENSG00000124496.12	novel	7286	18	NA	NA	-88	-13	intron_retention	FALSE	canonical	1	1	junction_17	28.0777467328077	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGTGCATTCCTTAAAAAAA	68	False	NA	-1	True	AATAAA	-30	NA	42452139	42225237	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_42228670_42232680_42232893_42236204_42236412_42243247_42243362_42246455_42246545_42254850_42254927_42256727_42256832_42256962_42257103_42258134_42258202_42259338_42259724_42263319_42263569_42264703_42264855_42265750_42265798_42268153_42269849_42300637_42300750_42362946_42363080_42451176_42451262_42452105
H1_mix_00077600	chr6	-	2245	3	FSM	ENSG00000112619.8	ENST00000230381.7	3001	3	699	57	699	-57	multi-exon	FALSE	canonical	1	1	junction_2	2.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAACTATGCTGTTAACAG	5939	False	NA	-59	True	NA	NA	NA	42721898	42696654	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_42698508_42704364_42704612_42721753
H1_mix_00077601	chr6	-	3205	16	NIC	ENSG00000124587.14	novel	3444	17	NA	NA	11	-144	combination_of_known_splicesites	FALSE	canonical	2	6	junction_14	17.1433174541374	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGTGTTGTGGCATGAAA	9	True	NA	-17	True	AATAAA	-17	NA	42979170	42964008	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_42964472_42964789_42964930_42965074_42965153_42965251_42965369_42965680_42965790_42966043_42966106_42966241_42966448_42966524_42966658_42966781_42966859_42967367_42967564_42968289_42968499_42968873_42968986_42969667_42969802_42969884_42969988_42974874_42975039_42978268
H1_mix_00077602	chr6	-	5406	26	NIC	ENSG00000044090.13	novel	5406	26	NA	NA	12	0	combination_of_known_junctions	TRUE	canonical	2	3	junction_2	26.97957746148	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACGTGTGTGTTTGGCGAC	13	True	NA	NA	False	AATAAA	-20	NA	43053839	43037616	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_43038012_43038266_43038485_43038565_43038693_43038841_43038988_43040155_43040427_43040529_43040747_43040914_43041076_43042801_43042985_43043073_43043181_43043447_43043631_43044751_43044886_43045226_43045403_43045586_43045683_43045985_43046092_43046235_43046408_43046510_43046602_43046879_43047108_43048147_43048254_43048331_43048570_43049406_43049663_43049962_43050160_43050259_43050399_43050967_43051469_43051611_43051764_43052208_43052797_43053621
H1_mix_00077603	chr6	-	2363	7	ISM	ENSG00000044090.13	ENST00000688302.1	5381	25	53	11274	8	0	5prime_fragment	FALSE	canonical	3	72	junction_5	20.3749573960018	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACTTTGCTATTTTAAGA	9	True	NA	2	True	AATAAA	-29	NA	43053843	43049098	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_43049663_43049962_43050160_43050259_43050399_43050967_43051469_43051611_43051764_43052208_43052797_43053621
H1_mix_00077604	chr6	-	917	2	FSM	ENSG00000112651.12	ENST00000487429.1	905	2	0	-12	0	12	multi-exon	FALSE	canonical	1	7	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCTGGCCAACATGGTGA	-15	True	NA	NA	False	NA	NA	NA	43059421	43057558	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43058234_43059179
H1_mix_00077605	chr6	-	926	8	NNC	ENSG00000146215.14	novel	991	8	NA	NA	0	49361	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	62.8805151352426	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAGCCAGGCAGTTTTCA	73	False	NA	NA	False	NA	NA	NA	43308797	43250348	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_43250374_43305471_43305876_43305995_43306125_43306218_43306314_43306445_43306518_43307838_43307897_43308314_43308410_43308749
H1_mix_00077606	chr6	-	758	6	NIC	ENSG00000146215.14	novel	991	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_3	57.7463418754816	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCAACTCTTCTTTGG	73	False	NA	-15	True	AATAAA	-14	NA	43308797	43305471	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_43305876_43306066_43306125_43306218_43306314_43307838_43307897_43308314_43308410_43308749
H1_mix_00077607	chr6	-	1129	6	NIC	ENSG00000146215.14	novel	991	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	56	junction_4	38.9902551928043	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCAGCCTCTGTGGCTTCT	73	False	NA	-56	True	CATAAA	-17	NA	43308797	43305512	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_43305876_43306066_43306125_43306218_43306314_43306445_43306518_43307838_43307897_43308314
H1_mix_00077609	chr6	-	1567	3	ISM	ENSG00000171467.16	ENST00000361428.3	8210	10	145	20814	-24	-20814	5prime_fragment	FALSE	canonical	3	40	junction_2	17.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTTTACTTAAATTGGA	-28	True	NA	NA	False	AATAAA	-25	NA	43369502	43356883	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_43357766_43365291_43365441_43368966
H1_mix_00077610	chr6	-	1548	6	FSM	ENSG00000171462.15	ENST00000372488.8	1548	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.18747549010185	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGCTCCTATGCCAGAAA	4	True	NA	2	True	AATAAA	-16	NA	43455548	43450351	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43451275_43451939_43452085_43453004_43453136_43454410_43454475_43454749_43454881_43455394
H1_mix_00077612	chr6	-	1234	1	FSM	ENSG00000271754.1	ENST00000607571.1	545	1	-461	-228	-461	228	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGCACTCTGGGAGGCT	8699	False	NA	NA	False	ATTAAA	-41	NA	43520185	43518951	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_43519000_43520200
H1_mix_00077613	chr6	-	450	1	FSM	ENSG00000183239.5	ENST00000331979.5	455	1	120	-115	120	115	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAAAAAAAAGCAAAAC	NA	False	NA	NA	False	AATAAA	-14	NA	44089576	44089126	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_44089100_44089600
H1_mix_00077614	chr6	-	2468	2	Genic_Genomic	ENSG00000287562.1	novel	4799	1	NA	NA	1745	4	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTGTGGTTTTTATTTGC	NA	False	NA	2	True	ATTAAA	-43	NA	44093840	44090782	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr6_-_44091442_44092031
H1_mix_00077616	chr6	-	840	1	NIC	ENSG00000146233.8	novel	2432	12	NA	NA	13	-63863	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTAGCTGACGTTGTT	-1	True	NA	NA	False	AATAAA	-10	NA	46652805	46651965	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_46652000_46652800
H1_mix_00077617	chr6	-	461	3	FSM	ENSG00000287485.1	ENST00000663906.1	3435	3	221	2753	221	-2753	multi-exon	FALSE	canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGTTCGTGCGTGACCCGA	NA	False	NA	NA	False	AATAAA	-18	NA	47397177	47377313	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_47377579_47395425_47395493_47397048
H1_mix_00077618	chr6	-	388	1	FSM	ENSG00000230204.1	ENST00000425761.1	545	1	297	-140	297	140	mono-exon	FALSE	NA	NA	NA	NA	NA	391	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAATAAAGAAATCTGGTAC	503	False	NA	NA	False	AAAACA	-35	NA	50912959	50912571	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_50912600_50913000
H1_mix_00077619	chr6	-	265	1	FSM	ENSG00000232702.3	ENST00000416077.1	457	1	201	-9	201	9	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCCCAGTTAAGACTTCC	5256	False	NA	NA	False	AATGAA	-43	NA	51410336	51410071	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_51410100_51410300
H1_mix_00077620	chr6	-	3096	18	NNC	ENSG00000112118.20	novel	3068	17	NA	NA	0	47510	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	651.900649445454	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGCCAGAATGCATAGAAA	-9	True	NA	NA	False	AAAAAG	-3	NA	52284742	52216503	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_52216532_52264014_52264787_52266074_52266145_52266610_52266697_52267864_52267969_52269085_52269227_52272300_52272452_52273229_52273357_52273741_52273917_52276267_52276477_52277066_52277199_52277534_52277689_52278741_52278851_52279360_52279600_52282044_52282176_52282652_52282862_52283293_52283407_52284596
H1_mix_00077622	chr6	-	3153	18	NNC	ENSG00000112118.20	novel	3208	17	NA	NA	-62	47510	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	651.900649445454	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGCCAGAATGCATAGAAA	NA	False	NA	NA	False	AAAAAG	-3	NA	52284804	52216503	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_52216531_52264018_52264787_52266074_52266145_52266610_52266697_52267864_52267969_52269085_52269227_52272300_52272452_52273229_52273357_52273741_52273917_52276267_52276477_52277066_52277199_52277534_52277689_52278741_52278851_52279360_52279600_52282044_52282176_52282652_52282862_52283293_52283407_52284596
H1_mix_00077623	chr6	-	3154	18	NNC	ENSG00000112118.20	novel	3208	17	NA	NA	-62	47510	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	651.900649445454	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGCCAGAATGCATAGAAA	NA	False	NA	NA	False	AAAAAG	-3	NA	52284804	52216503	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_52216529_52264015_52264787_52266074_52266145_52266610_52266697_52267864_52267969_52269085_52269227_52272300_52272452_52273229_52273357_52273741_52273917_52276267_52276477_52277066_52277199_52277534_52277689_52278741_52278851_52279360_52279600_52282044_52282176_52282652_52282862_52283293_52283407_52284596
H1_mix_00077624	chr6	-	3065	17	NNC	ENSG00000112118.20	novel	3068	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	194	junction_3	626.661687909633	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAATAGTCATAGTGTGT	-9	True	NA	-11	True	AATAAA	-23	NA	52284742	52264014	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_52264787_52266074_52266145_52266610_52266694_52267864_52267969_52269085_52269227_52272300_52272452_52273229_52273357_52273741_52273917_52276267_52276477_52277066_52277199_52277534_52277689_52278741_52278851_52279360_52279600_52282044_52282176_52282652_52282862_52283293_52283407_52284596
H1_mix_00077625	chr6	-	1342	5	FSM	ENSG00000170899.11	ENST00000486559.5	1698	5	356	0	356	0	multi-exon	FALSE	canonical	3	169	junction_4	5.85234995535981	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTTGTTGTGAGAATTT	8271	False	NA	-9	True	AATAAA	-22	NA	52987646	52977947	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_52978593_52982573_52982706_52984463_52984606_52985450_52985584_52987356
H1_mix_00077627	chr6	-	6554	15	NNC	ENSG00000112144.16	novel	6227	15	NA	NA	-280	4	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_14	15.4404716011301	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGTTCTGTTTTTGT	NA	False	NA	NA	False	AATAAA	-23	NA	53062104	53001298	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_53005304_53006314_53006438_53009438_53009568_53011768_53011918_53012036_53012228_53013661_53013983_53016082_53016251_53018329_53018502_53019226_53019360_53031064_53031145_53032532_53032655_53037938_53037994_53041135_53041409_53045665_53045790_53061595
H1_mix_00077629	chr6	-	514	4	FSM	ENSG00000227885.3	ENST00000662688.1	514	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.16024689946929	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAATATTTCAAAGATGT	NA	False	NA	NA	False	AATAAA	-19	NA	53794319	53746408	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_53746604_53746908_53747014_53793282_53793350_53794172
H1_mix_00077630	chr6	-	4158	29	NNC	ENSG00000124749.17	novel	4173	30	NA	NA	13	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	4.88333275289635	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGTCTTTTTTTATACCT	-11	True	NA	NA	False	AATAAA	-21	NA	56247567	56056586	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_56057845_56059164_56059243_56060017_56060219_56060740_56060796_56060890_56061038_56061648_56061682_56064577_56064623_56067294_56067331_56069045_56069118_56070744_56070799_56074231_56074286_56075478_56075533_56077528_56077574_56101471_56101526_56124061_56124116_56124238_56124291_56125564_56125621_56126095_56126150_56141784_56141839_56141929_56141984_56156886_56156950_56164422_56164507_56166901_56166984_56168123_56168298_56170648_56170866_56170959_56171129_56179577_56180130_56182530_56182657_56247386
H1_mix_00077631	chr6	-	4158	29	NIC	ENSG00000124749.17	novel	4173	30	NA	NA	13	3	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_16	5.76970890221738	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGTCTTTTTTTATACCT	-11	True	NA	NA	False	AATAAA	-21	NA	56247567	56056586	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_56057845_56059164_56059243_56060017_56060219_56060740_56060796_56060890_56061038_56061648_56061682_56064577_56064623_56067294_56067331_56069045_56069118_56070744_56070799_56074231_56074286_56075478_56075533_56077528_56077574_56101471_56101526_56124061_56124116_56124238_56124293_56125566_56125621_56126095_56126150_56141784_56141839_56141929_56141984_56156886_56156950_56164422_56164507_56166901_56166984_56168123_56168298_56170648_56170866_56170959_56171129_56179577_56180130_56182530_56182657_56247386
H1_mix_00077632	chr6	-	9719	43	NIC	ENSG00000151914.22	novel	16742	84	NA	NA	-251	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_6	44.212106005712	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGCTATGGAATTAATTTT	452	False	NA	-3	True	AATAAA	-18	NA	56542455	56458238	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_56459268_56460130_56460255_56463045_56463157_56463564_56463765_56466077_56466196_56468981_56469000_56469882_56469958_56470127_56470283_56471105_56471269_56472058_56472223_56473872_56474003_56476148_56476338_56477344_56477489_56482049_56482179_56482682_56482878_56485311_56485472_56487103_56487274_56489489_56489610_56492226_56492434_56492933_56493090_56494009_56494181_56497378_56497508_56497855_56498054_56501079_56501236_56501519_56501694_56503996_56504099_56506442_56506545_56506666_56506790_56508528_56508756_56509641_56509874_56511196_56511401_56515449_56515669_56517197_56517306_56517500_56517621_56526360_56526568_56527492_56527735_56528840_56528926_56529447_56529775_56529973_56530134_56532343_56532511_56535121_56535293_56536778_56536941_56540279
H1_mix_00077633	chr6	-	1666	6	FSM	ENSG00000215190.9	ENST00000418368.1	1666	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	6.30555310817378	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTACTTTGTCTTTCTC	6	True	NA	-6	True	AATAAA	-20	NA	57961380	57946077	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_57947178_57948872_57949069_57949858_57950012_57959027_57959112_57961151_57961225_57961320
H1_mix_00077634	chr6	-	753	1	FSM	ENSG00000214561.3	ENST00000398588.2	1289	1	28	508	28	-508	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGCTTCCAAACCAAGCCA	NA	False	NA	NA	False	NA	NA	NA	58121001	58120248	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_58120200_58121000
H1_mix_00077635	chr6	-	5929	10	NNC	ENSG00000112232.10	novel	2403	10	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_1	50.6688596016659	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTAAGCTTTATCTTGCTA	-29	True	NA	-11	True	AATAAA	-17	NA	62286225	61679958	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_61681061_61697194_61700778_61707329_61707404_61732681_61732765_61894634_61894834_61901243_61901372_61978065_61978213_62047877_62047995_62177184_62177313_62285857
H1_mix_00077636	chr6	-	2378	11	NNC	ENSG00000112232.10	novel	2403	10	NA	NA	52	-15	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	61.5236539877143	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGATTTTAAACTATCCTC	23	True	NA	-28	True	NA	NA	NA	62286173	61679975	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_61681061_61697194_61697254_61700735_61700778_61707329_61707404_61732681_61732765_61894634_61894834_61901243_61901372_61978065_61978213_62047877_62047995_62177184_62177313_62285857
H1_mix_00077637	chr6	-	1150	1	FSM	ENSG00000218890.1	ENST00000402902.1	1479	1	305	24	305	-24	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGCGAAAAGTAAAGATGT	NA	False	NA	NA	False	NA	NA	NA	66094604	66093454	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_66093500_66094600
H1_mix_00077638	chr6	-	606	3	FSM	ENSG00000256980.5	ENST00000370388.4	679	3	75	-2	75	2	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGATGTGCTGTCCTCTT	80	False	NA	NA	False	AATAAA	-24	NA	73225421	73223541	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73223840_73224165_73224349_73225296
H1_mix_00077639	chr6	-	210	1	FSM	ENSG00000271986.2	ENST00000607480.2	288	1	26	52	26	-52	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAAAAGCCACTGCACTC	NA	False	NA	NA	False	NA	NA	NA	73487851	73487641	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73487600_73487900
H1_mix_00077640	chr6	-	1833	8	FSM	ENSG00000156508.19	ENST00000356303.7	1883	8	50	0	-10	0	multi-exon	FALSE	canonical	1	5	junction_7	7818.74165459024	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTTCCTTTGGTCA	5070	False	NA	-5	True	ATTAAA	-17	NA	73521850	73517514	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73521731
H1_mix_00077641	chr6	-	1822	8	FSM	ENSG00000156508.19	ENST00000677236.1	1823	8	1	0	1	0	multi-exon	FALSE	canonical	1	220	junction_7	7745.54043120482	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACCTGTGTGTTCCTTTG	13	True	NA	-9	True	ATTAAA	-13	NA	73523836	73517518	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73523724
H1_mix_00077642	chr6	-	1048	7	NNC	ENSG00000119899.13	novel	734	5	NA	NA	25	12564	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	31.089476604722	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCAATCTCTTTCCTTT	-1	True	NA	1	True	AATAAA	-33	NA	73653967	73622668	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_73622817_73635381_73635501_73636620_73636708_73638411_73638500_73641690_73641925_73644406_73644604_73653792
H1_mix_00077643	chr6	-	11725	66	FSM	ENSG00000111799.22	ENST00000322507.13	11725	66	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_21	2.27276126924546	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCATGTTTCTTTCTTT	-3	True	NA	1	True	AATAAA	-17	NA	75206053	75084325	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_75086558_75087576_75087748_75089105_75089175_75090109_75090299_75091322_75091390_75091489_75091526_75095107_75095180_75097252_75097307_75101599_75101654_75101998_75102053_75102596_75102693_75103756_75103811_75105205_75105293_75106418_75106497_75109017_75109168_75113203_75113314_75113601_75113745_75115783_75115923_75116018_75116058_75117381_75117547_75119042_75119187_75119349_75119474_75121301_75121442_75123329_75123405_75123947_75124095_75124254_75124372_75125126_75125274_75126350_75126471_75128295_75128426_75130090_75130234_75130851_75130982_75131939_75132083_75133292_75133423_75133857_75133998_75134725_75134856_75137436_75137580_75138319_75138341_75138447_75138581_75138821_75138962_75142031_75142162_75143251_75143389_75145325_75145456_75146101_75146245_75147674_75147805_75148357_75148498_75151140_75151288_75151866_75152032_75152130_75152251_75152332_75152483_75154415_75154538_75155661_75155855_75156256_75156524_75165506_75165780_75175037_75175311_75177662_75177936_75180938_75181212_75183049_75183653_75183853_75184145_75188361_75188536_75189216_75189382_75189551_75189816_75191700_75191761_75192211_75192356_75194830_75194948_75202719_75202828_75205776
H1_mix_00077644	chr6	-	325	3	FSM	ENSG00000112695.13	ENST00000472311.6	325	3	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_1	2847	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGTAACTGCCACCAATAA	8	True	NA	-58	True	GATAAA	-40	NA	75243785	75237822	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_75237989_75241175_75241266_75243716
H1_mix_00077646	chr6	-	1286	7	NNC	ENSG00000118418.14	novel	872	6	NA	NA	0	733	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1813.39329710904	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCCAGGAAAGCTGAATTC	-18	True	NA	NA	False	NA	NA	NA	79234689	79200511	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_79200926_79201244_79201727_79202275_79202390_79203579_79203631_79208546_79208577_79214971_79215023_79234545
H1_mix_00077647	chr6	-	1010	7	FSM	ENSG00000118418.14	ENST00000620514.1	1010	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	2097.20253485976	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATACCTGACTCTTAGTA	NA	False	NA	-10	True	AATAAA	-17	NA	79234738	79201248	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_79201727_79202062_79202156_79202275_79202390_79203579_79203631_79208546_79208577_79214971_79215023_79234545
H1_mix_00077649	chr6	-	5345	28	NIC	ENSG00000005700.15	novel	6040	29	NA	NA	17	0	combination_of_known_splicesites	TRUE	canonical	2	6	junction_27	28.01983424489	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTTCATTTGAAGCTTT	11	True	NA	-8	True	AGTAAA	-18	NA	82247727	82169986	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_82171557_82172379_82172513_82173366_82173439_82181878_82182029_82191072_82191217_82191786_82191880_82194478_82194643_82196297_82196447_82200140_82200254_82200586_82200709_82201421_82201483_82202527_82202646_82204856_82204959_82210813_82210911_82211366_82211405_82211489_82211573_82212706_82212794_82214226_82214830_82216075_82216251_82217959_82218138_82220589_82220714_82223439_82223621_82224067_82224186_82225476_82225648_82227191_82227303_82231717_82231843_82234158_82234256_82247561
H1_mix_00077650	chr6	-	1751	11	NNC	ENSG00000118420.17	novel	1352	11	NA	NA	0	55796	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	36.2485861793257	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTCATATAGCCAAATG	90	False	NA	NA	False	NA	NA	NA	83065718	82836593	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_82836620_82892466_82893043_82957311_82957451_83018972_83019137_83022452_83022562_83023968_83024039_83038415_83038486_83044427_83044660_83054147_83054239_83057825_83058023_83065641
H1_mix_00077651	chr6	-	1440	6	NNC	ENSG00000118420.17	novel	1925	10	NA	NA	32064	157	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_5	44.0154518322827	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGACTGGAGCCAGGCATG	NA	False	NA	NA	False	NA	NA	NA	83025905	82892232	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_82893043_82957311_82957451_83018972_83019137_83022452_83022562_83023968_83024039_83025757
H1_mix_00077653	chr6	-	214	2	FSM	ENSG00000065609.15	ENST00000523780.1	261	2	47	0	47	0	multi-exon	FALSE	canonical	2	7	junction_1	0	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGCCCCTCCAGTTCCCG	6958	False	NA	NA	False	AATGAA	-43	NA	83594481	83593635	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_83593742_83594373
H1_mix_00077654	chr6	-	1624	1	FSM	ENSG00000287705.1	ENST00000656981.1	1856	1	230	2	230	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTTGATTGTAAACTATA	NA	False	NA	NA	False	AATAAA	-31	NA	83853937	83852313	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_83852300_83853900
H1_mix_00077655	chr6	-	5332	27	NNC	ENSG00000135315.12	novel	5155	27	NA	NA	6	220	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_10	18.2588229463078	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATGGTATCTCAGTGTG	-1	True	NA	-1	True	NA	NA	NA	84227629	84124020	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_84125277_84126377_84126513_84146686_84146786_84149561_84149704_84152544_84153180_84155297_84155511_84160811_84160917_84161745_84161910_84163143_84163271_84169327_84169396_84171605_84171719_84174047_84174189_84174726_84174955_84175213_84175348_84185186_84185449_84186331_84186624_84193608_84193691_84194883_84195076_84200788_84200906_84201736_84201768_84203980_84204097_84212956_84213025_84215281_84215466_84215775_84215923_84221056_84221172_84226336_84226453_84227579
H1_mix_00077656	chr6	-	4165	18	FSM	ENSG00000135315.12	ENST00000461137.5	4165	18	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_13	21.2532920307732	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAATGATTTCTGTTCCTT	NA	False	NA	-3	True	AATAAA	-26	NA	84195030	84124240	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_84125277_84126377_84126513_84146686_84146786_84149561_84149704_84152544_84153180_84155297_84155511_84160811_84160917_84161745_84161910_84163143_84163271_84169327_84169434_84171605_84171719_84174047_84174189_84174726_84174955_84175209_84175348_84185186_84185449_84186331_84186624_84193608_84193691_84194883
H1_mix_00077659	chr6	-	3149	27	FSM	ENSG00000135317.14	ENST00000684647.1	3821	27	0	672	0	45	multi-exon	FALSE	canonical	3	51	junction_26	73.3108099264427	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTCAGTTTGAAAACTGAA	-39	True	NA	NA	False	NA	NA	NA	85593897	85505447	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85572136_85572216_85572297_85572372_85574257_85574379_85593833
H1_mix_00077660	chr6	-	3240	28	FSM	ENSG00000135317.14	ENST00000683196.1	3693	28	0	453	0	45	multi-exon	FALSE	canonical	2	6	junction_22	69.5910058360882	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTCAGTTTGAAAACTGAA	8128	False	NA	NA	False	NA	NA	NA	85593938	85505447	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572375_85574257_85574379_85593833
H1_mix_00077661	chr6	-	3060	28	NIC	ENSG00000135317.14	novel	3193	29	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_27	53.0823828496671	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTCTCATAGTCTTTCA	8016	False	NA	-15	True	AATAAA	-31	NA	85594050	85505797	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572375_85574257_85574379_85593833
H1_mix_00077662	chr6	-	3401	28	NIC	ENSG00000135317.14	novel	4212	29	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_26	53.0934419702369	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTCTCATAGTCTTTCA	7927	False	NA	-15	True	AATAAA	-31	NA	85594139	85505797	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572372_85574257_85574379_85593578
H1_mix_00077664	chr6	-	1831	5	FSM	ENSG00000203875.13	ENST00000658919.1	1831	5	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_3	1596.37472104766	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTATCGAAATTAGTACT	509	False	NA	NA	False	AATAGA	-19	NA	85678748	85676195	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85677192_85677423_85677493_85677794_85677869_85677953_85678033_85678135
H1_mix_00077665	chr6	-	1741	2	FSM	ENSG00000203875.13	ENST00000667693.1	1741	2	0	0	0	0	multi-exon	FALSE	canonical	3	3280	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAGTTTATTAAGTATGG	509	False	NA	NA	False	AATAGA	-8	NA	85678748	85676775	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85677192_85677423
H1_mix_00077666	chr6	-	1457	2	FSM	ENSG00000203875.13	ENST00000664449.1	1440	2	0	-17	0	0	multi-exon	FALSE	canonical	3	3793	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGTGAGTGAATGTTTC	509	False	NA	3	True	ATTAAA	-33	NA	85678748	85676989	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85677493_85677794
H1_mix_00077669	chr6	-	401	4	FSM	ENSG00000203875.13	ENST00000453754.5	401	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	1534.6813639609	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTATGTTCCTTTTTGTTA	684	False	NA	-17	True	AATAAA	-14	NA	85678573	85677083	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_85677192_85677423_85677493_85678135_85678189_85678402
H1_mix_00077670	chr6	-	304	1	FSM	ENSG00000218561.1	ENST00000407695.1	401	1	-186	283	-186	-283	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATGCAAGGCCATCACT	NA	False	NA	NA	False	NA	NA	NA	86730294	86729990	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_86730000_86730300
H1_mix_00077671	chr6	-	210	1	FSM	ENSG00000272008.1	ENST00000606274.1	4127	1	3642	275	3642	-275	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATTAATTGTAGCCTTTG	4425	False	NA	NA	False	AAAACA	-18	NA	87151643	87151433	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_87151400_87151600
H1_mix_00077672	chr6	-	2459	20	NIC	ENSG00000146282.19	novel	2140	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	83	junction_8	177.423730248808	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTCATGGTCAGTAGGT	-8	True	NA	-13	True	AATAAA	-14	NA	87589987	87513937	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_87514500_87514956_87515021_87516805_87516881_87518168_87518265_87518629_87518740_87518823_87518892_87519582_87519708_87520179_87520253_87521463_87521525_87524556_87524653_87529541_87529649_87530783_87530943_87541917_87541995_87545615_87545700_87548590_87548647_87555407_87555506_87562701_87562786_87564129_87564233_87569516_87569591_87589700
H1_mix_00077673	chr6	-	2253	20	NIC	ENSG00000146282.19	novel	2242	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	12	junction_4	218.525998884265	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTCATGGTCAGTAGGT	-8	True	NA	-13	True	AATAAA	-14	NA	87589987	87513937	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_87514500_87514956_87515021_87516805_87516881_87518045_87518153_87518629_87518740_87518823_87518892_87519582_87519708_87520179_87520257_87521463_87521525_87524556_87524653_87529541_87529649_87530783_87530943_87541917_87541995_87545615_87545700_87548590_87548647_87555407_87555506_87562701_87562786_87564129_87564233_87569516_87569591_87589921
H1_mix_00077675	chr6	-	1717	19	NIC	ENSG00000146282.19	novel	2242	20	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	3	51	junction_14	167.714336791558	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATGGCTTTTAAAATG	-8	True	NA	-47	True	AATGAA	-41	NA	87589987	87514406	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_87514500_87514956_87515021_87516805_87516881_87518168_87518265_87518629_87518740_87518823_87518892_87519582_87519708_87520179_87520257_87521463_87521525_87524556_87524653_87529541_87529649_87530783_87530943_87541917_87541995_87545615_87545700_87555407_87555506_87562701_87562786_87564129_87564233_87569516_87569591_87589921
H1_mix_00077676	chr6	-	1862	6	NNC	ENSG00000135334.9	novel	1898	5	NA	NA	0	30780	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	198.126626176292	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAGTCAGCCATCTGTAT	24	True	NA	NA	False	NA	NA	NA	87702233	87644079	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_87644111_87674926_87675608_87675859_87675932_87677817_87677968_87681619_87681764_87701449
H1_mix_00077677	chr6	-	6012	2	FSM	ENSG00000118432.13	ENST00000369501.3	6019	2	2	5	2	-5	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGCCTTTGAACTCTG	1	True	NA	NA	False	AATAAA	-25	NA	88166345	88139868	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_88145338_88165802
H1_mix_00077679	chr6	-	1631	3	FSM	ENSG00000083099.11	ENST00000523075.1	608	3	-82	-941	-17	750	multi-exon	FALSE	canonical	0	0	junction_2	128	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACTGACACCAGGAGATA	229	False	NA	NA	False	AATAAA	-39	NA	89638514	89636106	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_89637354_89637741_89637883_89638271
H1_mix_00077680	chr6	-	1987	5	ISM	ENSG00000112159.12	ENST00000439638.1	3654	24	-52	43570	24	-43570	5prime_fragment	FALSE	canonical	3	33	junction_3	3.11247489949718	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCAGCGTGAGCCACTA	-16	True	NA	NA	False	NA	NA	NA	89819770	89792792	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_89793955_89794099_89794208_89794576_89794802_89803327_89803555_89819505
H1_mix_00077682	chr6	-	8524	25	NNC	ENSG00000146263.12	novel	8643	25	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_17	25.0939553921302	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGCCCTTGATTATTG	16	True	NA	-7	True	AATAAA	-18	NA	97283176	97142160	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_97146888_97149852_97150021_97151770_97151868_97162001_97162166_97165245_97165458_97168070_97168241_97173062_97173223_97178442_97178586_97179407_97179560_97181903_97182055_97186496_97186691_97228893_97229404_97231425_97231653_97233860_97233981_97246627_97246691_97254556_97254734_97263334_97263449_97267881_97268003_97269901_97269993_97272703_97272882_97272974_97273063_97278848_97278899_97281236_97281363_97282313_97282554_97283095
H1_mix_00077683	chr6	-	8284	23	NNC	ENSG00000146263.12	novel	8574	25	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_19	24.619626988601	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGCCCTTGATTATTG	-10	True	NA	-7	True	AATAAA	-18	NA	97283202	97142160	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_97146888_97149852_97150021_97151770_97151868_97162001_97162166_97165245_97165458_97168070_97168241_97173062_97173223_97178442_97178586_97179407_97179560_97181903_97182055_97186496_97186691_97228893_97229404_97231425_97231653_97233860_97233981_97246627_97246691_97254556_97254734_97263334_97263449_97267881_97268003_97269901_97269993_97278848_97278899_97281236_97281363_97282313_97282554_97283095
H1_mix_00077685	chr6	-	429	1	Intergenic	novelGene_1297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTAATACAAAAAATAAAAC	NA	False	NA	NA	False	NA	NA	NA	97785285	97784856	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_-_97784900_97785300
H1_mix_00077686	chr6	-	1551	4	NIC	ENSG00000146267.12	novel	11528	6	NA	NA	57	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	44.0025251800646	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGAACACCTACTATGTG	444	False	NA	-50	True	AATAAA	-14	NA	99349617	99280666	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_99281454_99291703_99291821_99342897_99343034_99349106
H1_mix_00077687	chr6	-	1779	5	NIC	ENSG00000146267.12	novel	11528	6	NA	NA	26	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	39.7327006381394	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGAACACCTACTATGTG	23	True	NA	-50	True	AATAAA	-14	NA	99349648	99280666	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_99281454_99291703_99291821_99333350_99333548_99342897_99343034_99349106
H1_mix_00077688	chr6	-	2871	12	NIC	ENSG00000132424.17	novel	5189	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	89	junction_3	241.163022260431	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	24	True	NA	-12	True	AATAAA	-25	NA	99425270	99399963	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_99400312_99400543_99401631_99402539_99402711_99404602_99404703_99406030_99406169_99408080_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414687_99416348_99416429_99425214
H1_mix_00077689	chr6	-	1762	11	NIC	ENSG00000132424.17	novel	3142	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	21	junction_1	275.088076804503	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	24	True	NA	-12	True	AATAAA	-25	NA	99425270	99399963	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_99400312_99402539_99402711_99403828_99403883_99404602_99404703_99406030_99406169_99408080_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99425214
H1_mix_00077690	chr6	-	5206	14	NIC	ENSG00000123552.18	novel	1741	14	NA	NA	0	3504	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	40.513274908195	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTCTGTGACTTATATG	5	True	NA	NA	False	AATAAA	-39	NA	99515423	99458959	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_99462816_99464603_99464748_99465079_99465137_99466671_99466764_99468536_99468619_99476142_99476231_99482752_99482884_99488199_99488296_99488680_99488821_99503764_99503866_99507427_99507532_99508609_99508783_99510120_99510231_99515391
H1_mix_00077691	chr6	-	5516	9	NNC	ENSG00000112276.14	novel	5550	8	NA	NA	12	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	7.74495803732983	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTATTTTTTATTTCA	47	False	NA	4	True	AATAAA	-17	NA	105137145	105096821	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_105100549_105100570_105101214_105115685_105115828_105116700_105116869_105124546_105124656_105125390_105125579_105129378_105129504_105133351_105133589_105136968
H1_mix_00077692	chr6	-	1816	4	FSM	ENSG00000132429.10	ENST00000254765.4	1879	4	0	63	0	-63	multi-exon	TRUE	canonical	1	1	junction_2	20.9814733091416	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATAATATGTGAATCTTG	-48	True	NA	NA	False	AATAAA	-9	NA	105180014	105157962	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_105158752_105159710_105159820_105161424_105162161_105179832
H1_mix_00077693	chr6	-	3087	8	FSM	ENSG00000057663.16	ENST00000343245.7	3092	8	5	0	5	0	multi-exon	FALSE	canonical	3	15	junction_7	129.233849107353	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTCCGTCTTTATTT	368	False	NA	NA	False	AATAAA	-1	NA	106325412	106184475	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_106186677_106201971_106202090_106248149_106248245_106279660_106279824_106293027_106293107_106308363_106308492_106316100_106316267_106325275
H1_mix_00077694	chr6	-	2655	3	NNC	ENSG00000272398.6	novel	2156	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	179.5	1534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCATTTTAAGTTTTTC	1	True	NA	-21	True	AATAAA	-22	NA	106974729	106969830	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_106971835_106973669_106974169_106974577
H1_mix_00077695	chr6	-	2628	4	NNC	ENSG00000272398.6	novel	2513	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	128.245424436464	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCATTTTAAGTTTTTC	0	True	NA	-21	True	AATAAA	-22	NA	106975459	106969830	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_106971835_106973316_106973438_106974577_106974755_106975133
H1_mix_00077696	chr6	-	2556	4	NNC	ENSG00000272398.6	novel	2513	3	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	107.97942190786	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCATTTTAAGTTTTTC	4	True	NA	-21	True	AATAAA	-22	NA	106975622	106969830	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_106971835_106973316_106973438_106974577_106974755_106975368
H1_mix_00077698	chr6	-	586	2	FSM	ENSG00000272398.6	ENST00000620405.1	586	2	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACTGAACTCACTTTCCT	-2	True	NA	NA	False	NA	NA	NA	106974732	106971093	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_106971525_106974577
H1_mix_00077700	chr6	-	802	3	FSM	ENSG00000272398.6	ENST00000610952.1	802	3	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_2	2745.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGATGGATGCCAATATT	-1	True	NA	NA	False	NA	NA	NA	106975627	106971468	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_106971835_106974577_106974755_106975368
H1_mix_00077701	chr6	-	3299	7	NIC	ENSG00000164494.12	novel	3536	8	NA	NA	107	2	combination_of_known_splicesites	FALSE	canonical	3	5	junction_2	25.8096665784138	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCAGGTTTGTTTTATT	107	False	NA	-3	True	ATTAAA	-19	NA	107459457	107152559	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_107154778_107193821_107193855_107212108_107212283_107245547_107245620_107274028_107274228_107334197_107334333_107458989
H1_mix_00077702	chr6	-	4540	1	FSM	ENSG00000219565.2	ENST00000572422.1	4912	1	311	61	311	-61	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTAAATGGCAAGAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	108786726	108782186	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_108782200_108786700
H1_mix_00077703	chr6	-	2414	7	FSM	ENSG00000135535.17	ENST00000413644.6	2414	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	337.021595087845	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGTTACTGCGTTTTG	460	False	NA	-1	True	AATAAA	-22	NA	109382457	109366513	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_109368326_109368921_109369018_109370410_109370468_109376073_109376113_109377899_109377972_109379578_109379663_109382203
H1_mix_00077704	chr6	-	3669	26	NNC	ENSG00000135596.18	novel	3430	25	NA	NA	-105	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_19	66.141012994964	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCGTTCACACCGCCTACA	10	True	NA	-4	True	ATTAAA	-17	NA	109455877	109444061	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_109444340_109444724_109444799_109444895_109444996_109445196_109445291_109445415_109445530_109445770_109445863_109446135_109446413_109446695_109446773_109447072_109447230_109447356_109447441_109447680_109447723_109447874_109447964_109448202_109448394_109448731_109448880_109449399_109449482_109449656_109449784_109449969_109450086_109450299_109450558_109451599_109451701_109451985_109452120_109452245_109452402_109452510_109452616_109453262_109453368_109453637_109453846_109453938_109454240_109455718
H1_mix_00077705	chr6	-	3681	25	FSM	ENSG00000135596.18	ENST00000630715.2	3678	25	0	-3	0	0	multi-exon	FALSE	canonical	1	2	junction_24	55.8022301426107	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCGTTCACACCGCCTACA	NA	False	NA	-4	True	ATTAAA	-17	NA	109465968	109444061	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_109444340_109444724_109444799_109444895_109444996_109445196_109445291_109445415_109445530_109445770_109445863_109446135_109446413_109446695_109446773_109447072_109447230_109447356_109447441_109447680_109447723_109447874_109447964_109448202_109448394_109448731_109448880_109449399_109449482_109449656_109449784_109449969_109450086_109450299_109450558_109451599_109451701_109452245_109452402_109452510_109452616_109453262_109453368_109453637_109453846_109453938_109454240_109465663
H1_mix_00077708	chr6	-	2010	2	ISM	ENSG00000009413.16	ENST00000462119.5	2518	7	7393	3	7178	0	intron_retention	FALSE	canonical	3	23	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGTGACTTCATCTTTT	NA	False	NA	-13	True	AATAAA	-16	NA	111308244	111299030	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr6_-_111300157_111307360
H1_mix_00077710	chr6	-	1012	6	FSM	ENSG00000010810.17	ENST00000523238.5	1012	6	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_5	114.599476438595	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGGCCGAAAAGATGCTG	-1	True	NA	NA	False	TTTAAA	-17	NA	111873440	111704087	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_111704103_111707921_111708021_111714346_111714444_111719804_111720063_111780565_111780636_111872967
H1_mix_00077714	chr6	-	299	2	FSM	ENSG00000249853.9	ENST00000441954.2	299	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGCATCTCATTGAGTTG	NA	False	NA	NA	False	TTTAAA	-16	NA	114168450	114167476	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_114167680_114168354
H1_mix_00077715	chr6	-	5567	2	Antisense	novelGene_ENSG00000228624.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGAAGTTTTGCTTTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	114410899	114400707	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr6_-_114402273_114406897
H1_mix_00077716	chr6	-	1214	1	FSM	ENSG00000218428.1	ENST00000404319.1	515	1	-22	-677	-22	677	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGCCTGGGAAATGACA	NA	False	NA	NA	False	TATAAA	-10	NA	116137594	116136380	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_116136400_116137600
H1_mix_00077718	chr6	-	1593	9	NIC	ENSG00000153975.10	novel	2167	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_8	48.9309143078279	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTGTTTTTCTTATCTA	18	True	NA	-1	True	AATAAA	-22	NA	116668766	116635617	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_116635880_116645713_116645935_116647458_116647611_116651571_116651738_116652003_116652193_116656683_116656853_116658802_116658925_116660735_116660847_116668565
H1_mix_00077720	chr6	-	2306	9	NNC	ENSG00000111877.18	novel	2442	7	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	18.1383571472171	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGGAATGTTTCCTAA	51	False	NA	-2	True	AATAAA	-17	NA	118935107	118910596	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_118911387_118911649_118911770_118913294_118913421_118917560_118917762_118922004_118922087_118923810_118924128_118931419_118931739_118932606_118932741_118934890
H1_mix_00077721	chr6	-	3652	18	NIC	ENSG00000111879.20	novel	4128	18	NA	NA	64	3	combination_of_known_junctions	FALSE	canonical	1	20	junction_17	76.4298534039513	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTATTTTTTTCTACG	NA	False	NA	3	True	AATAAA	-21	NA	119079115	118959825	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_118960185_118961760_118961964_118964666_118964772_118966834_118966953_118974427_118974575_118975023_118975209_118975916_118976045_118979364_118979519_118980137_118980351_119002898_119003050_119003500_119003623_119006446_119006609_119011308_119011432_119016746_119016945_119019977_119020160_119022944_119023081_119023958_119024814_119079004
H1_mix_00077727	chr6	-	4035	5	NNC	ENSG00000186439.14	novel	4649	21	NA	NA	11	1152	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	75.938708838115	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGTCTTAATTTTACTT	NA	False	NA	-10	True	AATAAA	-28	NA	123530554	123497036	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_123500714_123503718_123503902_123512302_123512363_123516140_123516207_123530505
H1_mix_00077729	chr6	-	1828	2	NNC	ENSG00000186439.14	novel	1294	6	NA	NA	49209	-40833	at_least_one_novel_splicesite	FALSE	canonical	3	314	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCTTAAGTATTTCTT	NA	False	NA	NA	False	ATTAAA	-21	NA	123587700	123569546	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_123571133_123587458
H1_mix_00077730	chr6	-	472	3	NNC	ENSG00000237742.8	novel	1685	4	NA	NA	37624	-6	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	11.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATAGTTATCACATATCT	NA	False	NA	-3	True	AATAAA	-19	NA	125707404	125578559	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_125578726_125645633_125645701_125707165
H1_mix_00077731	chr6	-	2331	14	FSM	ENSG00000164483.17	ENST00000368134.6	2377	14	46	0	46	0	multi-exon	FALSE	canonical	0	0	junction_12	32.7330967264293	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGTCGATTTATTTTGA	486	False	NA	-13	True	AATAAA	-17	NA	130365379	130144314	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_130144805_130145339_130145423_130146009_130146182_130154824_130155026_130175840_130176009_130184102_130184188_130184437_130184624_130209494_130209609_130214336_130214527_130215194_130215295_130216570_130216617_130222693_130222814_130312977_130313094_130365119
H1_mix_00077733	chr6	-	3914	18	FSM	ENSG00000079819.19	ENST00000530481.5	3914	18	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	114.496611515114	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCACTTCTCTTTTTCT	-9	True	NA	-6	True	AATAAA	-19	NA	131063225	130839346	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_130840599_130858130_130858244_130863637_130863719_130865535_130865635_130867458_130867582_130869811_130870127_130885095_130885269_130890293_130890467_130894343_130894442_130894966_130895120_130899490_130899579_130900961_130901181_130904464_130904541_130908820_130908864_130926604_130926710_130955104_130955318_130955993_130956500_131063141
H1_mix_00077734	chr6	-	3372	15	FSM	ENSG00000079819.19	ENST00000392427.7	3369	15	0	-3	0	0	multi-exon	FALSE	canonical	1	7	junction_3	107.223517257462	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCACTTCTCTTTTTCT	12	True	NA	-6	True	AATAAA	-19	NA	131063233	130839346	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_130840599_130858130_130858244_130863637_130863719_130885095_130885269_130890293_130890467_130894343_130894442_130894966_130895120_130899490_130899579_130900961_130901181_130904464_130904541_130908820_130908864_130926604_130926710_130955104_130955318_130955993_130956500_131063154
H1_mix_00077742	chr6	-	5651	29	FSM	ENSG00000135541.22	ENST00000679925.1	5651	29	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_26	21.4267558754688	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCAGCTAATAATTTTGA	30	True	NA	NA	False	AATAAA	-19	NA	135497714	135283985	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_135285648_135300499_135300559_135318518_135318617_135323161_135323325_135358131_135358188_135394775_135394897_135404950_135404978_135411347_135411545_135427166_135427308_135428628_135428760_135429881_135430001_135431207_135431315_135433026_135433257_135438374_135438499_135442581_135442715_135447007_135447161_135448289_135448476_135453340_135453437_135455733_135455927_135457493_135457714_135463124_135463307_135465813_135466374_135467580_135467635_135490622_135490748_135492227_135492292_135495538_135495710_135495813_135495899_135497187_135497250_135497582
H1_mix_00077746	chr6	-	4186	13	FSM	ENSG00000029363.17	ENST00000530767.5	4186	13	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_9	212.361719714265	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTGCATGACTATGTG	31	True	NA	0	True	AATAAA	-32	NA	136289781	136259350	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_136261116_136261264_136261478_136267028_136267176_136268161_136268340_136269436_136269613_136271994_136272080_136273081_136273188_136275531_136275702_136275842_136275990_136277864_136278777_136279762_136279877_136282583_136282688_136289712
H1_mix_00077767	chr6	-	3431	6	FSM	ENSG00000112031.16	ENST00000367230.5	3431	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	87.130706412837	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTGTATCCAGCATCAT	17	True	NA	-108	True	AATAAA	-33	NA	153002685	152987361	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_152990096_152992856_152992975_152994512_152994677_152995243_152995320_152998549_152998630_153002426
H1_mix_00077773	chr6	-	3140	15	NNC	ENSG00000092820.19	novel	3052	14	NA	NA	0	9022	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1635.05184964282	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTGAGACAGGATCT	0	True	NA	NA	False	ACTAAA	-28	NA	158819368	158756718	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_158756750_158765749_158767138_158767260_158767513_158769325_158769419_158769783_158769945_158770763_158770895_158771243_158771408_158776407_158776505_158783519_158783667_158784643_158784728_158785308_158785584_158787107_158787204_158789287_158789372_158818081_158818167_158819316
H1_mix_00077775	chr6	-	3178	15	NNC	ENSG00000092820.19	novel	3052	14	NA	NA	-30	9022	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1635.05184964282	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTGAGACAGGATCT	NA	False	NA	NA	False	ACTAAA	-28	NA	158819398	158756718	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_158756750_158765741_158767138_158767260_158767513_158769325_158769419_158769783_158769945_158770763_158770895_158771243_158771408_158776407_158776505_158783519_158783667_158784643_158784728_158785308_158785584_158787107_158787204_158789287_158789372_158818081_158818167_158819316
H1_mix_00077790	chr6	-	8492	13	NIC	ENSG00000184465.16	novel	4654	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	20	junction_8	28.6874924352447	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCCTATTGGTTTGTTC	12	True	NA	-3	True	AATAAA	-23	NA	169702029	169657758	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr6_-_169658047_169658275_169658359_169659085_169659208_169659450_169659519_169660662_169660767_169662303_169662425_169663562_169663879_169664165_169664633_169664769_169670694_169672254_169672397_169688816_169689013_169689126_169689309_169701550
H1_mix_00077792	chr6	-	4285	8	FSM	ENSG00000130024.15	ENST00000480008.1	4285	8	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	61.58021150483	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCTGTCATCTTTTGCA	-14	True	NA	0	True	AATAAA	-23	NA	169724005	169707027	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_169710392_169712385_169712540_169715707_169715858_169715954_169716089_169717822_169717907_169718787_169718919_169721004_169721112_169723844
H1_mix_00077794	chr6	-	1078	6	NNC	ENSG00000071994.11	novel	1082	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	25	junction_5	198.546115550015	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAGGAGTCTTTACTGTT	3	True	NA	-2	True	ATTAAA	-21	NA	170584615	170578481	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr6_-_170578657_170578856_170578971_170580001_170580106_170583056_170583189_170583504_170583741_170584298
H1_mix_00077796	chr6	-	1166	4	FSM	ENSG00000071994.11	ENST00000544336.5	1164	4	0	-2	0	0	multi-exon	FALSE	canonical	3	28	junction_3	219.468043738086	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGCTTTTATTTTGAGA	92	False	NA	-12	True	AATAAA	-16	NA	170584692	170581744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr6_-_170582266_170583056_170583189_170583504_170583624_170584298
H1_mix_00077797	chr6	+	1599	1	Intergenic	novelGene_1220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTACATTTTGTATTCTTG	NA	False	NA	NA	False	TATAAA	-15	NA	10773702	10775301	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_10773700_10775300
H1_mix_00077800	chr6	+	454	1	Intergenic	novelGene_1244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGATACAACTTTTCCCT	17	False	NA	NA	False	NA	NA	NA	21750799	21751253	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_21750800_21751300
H1_mix_00077801	chr6	+	296	1	Intergenic	novelGene_1247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTGCTTTCAAAGTATTT	604	False	NA	NA	False	NA	NA	NA	26189460	26189756	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_26189500_26189800
H1_mix_00077802	chr6	+	331	1	Intergenic	novelGene_1248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAGAAAAACATTCACATT	8597	False	NA	NA	False	NA	NA	NA	26214079	26214410	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_26214100_26214400
H1_mix_00077804	chr6	+	225	1	Intergenic	novelGene_1257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	741	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGCTGTTGTGCCTTAT	NA	False	NA	NA	False	NA	NA	NA	27592672	27592897	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_27592700_27592900
H1_mix_00077805	chr6	+	299	1	Intergenic	novelGene_1260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGTTCTTAACAAGGTC	NA	False	NA	NA	False	NA	NA	NA	27659415	27659714	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_27659400_27659700
H1_mix_00077806	chr6	+	275	1	Intergenic	novelGene_1268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCATCTCGATTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	28929503	28929778	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_28929500_28929800
H1_mix_00077807	chr6	+	245	1	Intergenic	novelGene_1279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCCCAACAAACCCCTGT	NA	False	NA	NA	False	NA	NA	NA	65305566	65305811	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_65305600_65305800
H1_mix_00077808	chr6	+	1007	1	Intergenic	novelGene_1280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTCTTTATCATTTGAA	NA	False	NA	NA	False	NA	NA	NA	70536954	70537961	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_70537000_70538000
H1_mix_00077810	chr6	+	1389	1	Intergenic	novelGene_1281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4682	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTACTTTTGTTAAGTTT	NA	False	NA	NA	False	AATAAA	-33	NA	76849640	76851029	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_76849600_76851000
H1_mix_00077811	chr6	+	463	1	Intergenic	novelGene_1283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTTTAGTCTTTTTAAAG	9758	False	NA	NA	False	TTTAAA	-30	NA	77662796	77663259	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_77662800_77663300
H1_mix_00077812	chr6	+	272	1	Intergenic	novelGene_1292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	91318410	91318682	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_91318400_91318700
H1_mix_00077813	chr6	+	738	1	Intergenic	novelGene_1305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTACCTCTACTCCCTCCT	NA	False	NA	NA	False	NA	NA	NA	115034042	115034780	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr6_+_115034000_115034800
H1_mix_00077823	chr7	+	3691	10	FSM	ENSG00000177706.9	ENST00000313766.6	3176	10	-542	27	-542	0	multi-exon	TRUE	canonical	3	68	junction_6	10.5946643920535	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGGCCTCACGGGGCGGG	NA	False	NA	26	True	AATAAA	-16	NA	192028	260745	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_193805_195553_195733_208897_208977_246414_246508_248314_248431_255848_256030_256653_256764_257004_257087_258645_258706_259730
H1_mix_00077824	chr7	+	3858	1	Genic_Genomic	ENSG00000177706.9	novel	NA	NA	NA	NA	1201	3108	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCGTGGAATAAATAACAGTC	3404	False	NA	NA	False	AATAAA	-18	NA	196825	200683	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr7_+_196800_200700
H1_mix_00077825	chr7	+	3436	13	FSM	ENSG00000164818.16	ENST00000297440.11	3412	13	-24	0	-24	0	multi-exon	FALSE	canonical	3	314	junction_1	49.54199957836	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTGTATGCCTGACTT	NA	False	NA	14	True	ATTAAA	-15	NA	726674	786475	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_727316_729662_729848_740818_740944_741346_741466_754588_754822_756781_756995_761752_761897_763805_763975_770470_770619_774047_774199_775005_775163_779952_780145_785516
H1_mix_00077828	chr7	+	3812	18	FSM	ENSG00000164828.18	ENST00000389574.7	3812	18	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_5	109.800069960459	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGGGATATAAACAGTCTA	-16	True	NA	12	True	AATAAA	-22	NA	816614	874902	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_816674_838797_838987_841945_842131_843205_843233_843340_843521_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
H1_mix_00077829	chr7	+	3705	17	FSM	ENSG00000164828.18	ENST00000452783.6	3717	17	12	0	4	0	multi-exon	FALSE	canonical	3	89	junction_4	119.7016473362	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTTTTCTCAGTTTGT	-4	True	NA	30	True	AATAAA	-40	NA	816626	874920	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_816674_832504_832602_838797_838987_841945_842131_851949_852044_852608_852668_852812_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
H1_mix_00077830	chr7	+	3976	20	NIC	ENSG00000164828.18	novel	4488	21	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_6	118.251316953423	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGGGATATAAACAGTCTA	13	True	NA	12	True	AATAAA	-22	NA	816643	874902	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_816674_832504_832602_838797_838987_841945_842131_843205_843233_843340_843521_851383_851483_851949_852044_852608_852668_852812_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
H1_mix_00077831	chr7	+	3869	19	NIC	ENSG00000164828.18	novel	3868	18	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	149	junction_6	94.9152968717209	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGGGATATAAACAGTCTA	24	False	NA	12	True	AATAAA	-22	NA	816654	874902	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_816674_832504_832602_838797_838987_841945_842131_843205_843233_843340_843521_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
H1_mix_00077832	chr7	+	4003	19	FSM	ENSG00000164828.18	ENST00000401592.6	4010	19	0	7	0	7	multi-exon	FALSE	canonical	3	60	junction_5	110.366505028015	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCAGTTTGTCTGTTTC	-14	True	NA	37	True	TATAAA	-13	NA	832475	874927	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_832602_838797_838987_841945_842131_843205_843233_843340_843521_851383_851483_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
H1_mix_00077834	chr7	+	4195	21	NNC	ENSG00000164828.18	novel	4488	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_7	153.353472409333	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGGGATATAAACAGTCTA	15	True	NA	12	True	AATAAA	-22	NA	832504	874902	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_832602_838797_838987_841945_842131_843205_843233_843340_843521_848417_848616_849519_849604_851383_851483_851949_852044_852608_852668_852812_852953_853408_853586_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
H1_mix_00077835	chr7	+	3847	18	NIC	ENSG00000164828.18	novel	3868	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	123	junction_7	106.868674057507	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGGGATATAAACAGTCTA	15	True	NA	12	True	AATAAA	-22	NA	832504	874902	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_832602_838797_838987_841945_842131_843205_843233_843340_843521_851949_852044_852608_852668_852812_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
H1_mix_00077836	chr7	+	3868	18	FSM	ENSG00000164828.18	ENST00000425407.6	3868	18	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_5	94.6547176369686	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTTTTCTCAGTTTGT	15	True	NA	30	True	AATAAA	-40	NA	832504	874920	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_832602_838797_838987_841945_842131_843205_843233_843340_843521_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
H1_mix_00077837	chr7	+	4338	22	NIC	ENSG00000164828.18	novel	4488	21	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	101	junction_7	122.963648924859	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGCATGGGATATAAACAG	15	True	NA	8	True	AATAAA	-18	NA	832504	874898	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_832602_838797_838987_841945_842131_843205_843233_843340_843521_848417_848616_849519_849604_849922_850034_851383_851483_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
H1_mix_00077838	chr7	+	4339	22	NIC	ENSG00000164828.18	novel	4488	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	101	junction_7	129.454761007049	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGGGATATAAACAGTCTA	15	True	NA	12	True	AATAAA	-22	NA	832504	874902	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_832602_838797_838987_841945_842131_843205_843233_843340_843521_848417_848616_849519_849604_849922_850034_851383_851483_851949_852044_852608_852668_852812_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
H1_mix_00077843	chr7	+	2090	9	FSM	ENSG00000239857.7	ENST00000265857.8	2090	9	0	0	0	0	multi-exon	FALSE	canonical	3	624	junction_3	29.1161467230813	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCAACGCTGGTCCTTTC	-3	True	NA	16	True	AATAAA	-16	NA	876553	896436	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_876801_886055_886135_886568_886651_887369_887520_890927_891067_892277_892419_893739_893816_893898_893972_895333
H1_mix_00077844	chr7	+	4356	8	FSM	ENSG00000239857.7	ENST00000407192.5	4356	8	0	0	0	0	multi-exon	FALSE	canonical	3	624	junction_2	27.5184539195509	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCAACGCTGGTCCTTTC	3889	False	NA	16	True	AATAAA	-16	NA	883542	896436	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_886135_886568_886651_887369_887520_890927_891067_892277_892419_893739_893816_893898_893972_895333
H1_mix_00077845	chr7	+	1714	3	FSM	ENSG00000229043.3	ENST00000423008.2	1714	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	10.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTAACATGGTGAAACCC	12	True	NA	-54	True	NA	NA	NA	1160373	1165580	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_1160624_1163451_1163496_1164160
H1_mix_00077846	chr7	+	1939	4	FSM	ENSG00000229043.3	ENST00000662926.1	1939	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	12.0277457017791	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTCTACTACAAATAAAAAA	-27	True	NA	-27	True	NA	NA	NA	1160431	1165607	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_1160624_1162961_1163218_1163451_1163496_1164160
H1_mix_00077847	chr7	+	3372	3	FSM	ENSG00000198517.10	ENST00000343242.9	3380	3	8	0	8	0	multi-exon	FALSE	canonical	2	4	junction_2	2.5	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTCGTTGCGTAGCTGG	4	True	NA	14	True	AATAAA	-19	NA	1530709	1543043	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_1530899_1539148_1539229_1539940
H1_mix_00077848	chr7	+	595	4	FSM	ENSG00000230487.9	ENST00000651857.1	588	4	-7	0	0	0	multi-exon	TRUE	canonical	3	6	junction_3	3.68178700572909	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGCAGTAGTTGTAGCC	-8	True	NA	NA	False	AATAAA	-20	NA	1570134	1579485	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_1570280_1574714_1574864_1575786_1575889_1579286
H1_mix_00077849	chr7	+	5747	5	FSM	ENSG00000230487.9	ENST00000437964.5	2666	5	0	-3081	0	0	multi-exon	FALSE	canonical	2	4	junction_3	3.93700393700591	1272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATAACTCTCCATCCTTCT	-8	True	NA	NA	False	AATAAA	-19	NA	1570134	1589626	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_1570280_1574714_1574864_1575786_1575889_1583161_1583270_1584383
H1_mix_00077851	chr7	+	664	4	FSM	ENSG00000106268.16	ENST00000356714.6	658	4	-6	0	-6	0	multi-exon	FALSE	canonical	3	308	junction_1	297.694474251707	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	-2	True	NA	19	True	AATAAA	-15	NA	2242219	2251145	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_2242257_2244562_2244727_2249856_2250003_2250828
H1_mix_00077852	chr7	+	751	5	FSM	ENSG00000106268.16	ENST00000397046.5	712	5	-39	0	-6	0	multi-exon	FALSE	canonical	3	41	junction_1	410.582817468047	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	-2	True	NA	19	True	AATAAA	-15	NA	2242219	2251145	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_2242293_2242924_2242976_2244562_2244727_2249856_2250003_2250828
H1_mix_00077853	chr7	+	712	5	NIC	ENSG00000106268.16	novel	698	4	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	117	junction_1	388.518017600214	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	1	True	NA	19	True	AATAAA	-15	NA	2242222	2251145	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_2242257_2242924_2242976_2244562_2244727_2249856_2250003_2250828
H1_mix_00077854	chr7	+	1719	4	FSM	ENSG00000106268.16	ENST00000343985.8	771	4	-682	-266	-3	265	multi-exon	FALSE	canonical	3	56	junction_1	416.48769489626	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGGATTCCAGGCGTGA	1	True	NA	NA	False	NA	NA	NA	2242222	2251411	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_2243049_2244562_2244727_2249856_2250003_2250828
H1_mix_00077855	chr7	+	1074	8	FSM	ENSG00000106263.19	ENST00000431643.5	1074	8	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	731.288463143328	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCTATTTTTAAGTAAGTG	-11	True	NA	NA	False	NA	NA	NA	2354085	2366435	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_2354196_2355233_2355421_2360709_2360903_2362644_2362765_2363069_2363128_2363631_2363761_2364371_2364530_2366316
H1_mix_00077856	chr7	+	3096	19	FSM	ENSG00000106263.19	ENST00000360876.9	3096	19	0	0	0	0	multi-exon	FALSE	canonical	1	734	junction_11	441.730914264877	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGTCTTTCTCCTCTCTTT	-36	True	NA	46	True	AATAAA	-20	NA	2354826	2380745	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_2355421_2360709_2360903_2362644_2362765_2363069_2363128_2363631_2363761_2364371_2364530_2366316_2366449_2366524_2366592_2366998_2367046_2369471_2369683_2371776_2371850_2372672_2372796_2374527_2374607_2375388_2375528_2376949_2377076_2378688_2378767_2379133_2379243_2379393_2379512_2380203
H1_mix_00077858	chr7	+	3016	19	FSM	ENSG00000106263.19	ENST00000397011.2	2966	19	-55	5	0	0	multi-exon	FALSE	canonical	1	734	junction_11	440.498486565694	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCGGTCTTTCTCCTC	-36	True	NA	41	True	AATAAA	-15	NA	2354826	2380740	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_2355421_2360709_2360903_2362644_2362765_2363069_2363128_2363631_2363761_2364371_2364530_2366316_2366449_2366524_2366592_2366998_2367046_2369471_2369683_2371776_2371850_2372672_2372796_2374527_2374607_2375388_2375528_2376949_2377076_2378688_2378767_2379133_2379243_2379393_2379512_2380278
H1_mix_00077859	chr7	+	2853	20	NIC	ENSG00000106263.19	novel	2966	19	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	324	junction_1	579.633540740394	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGTCTTTCTCCTCTCTTT	15	True	NA	46	True	AATAAA	-20	NA	2354877	2380745	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_2355117_2355233_2355421_2360709_2360903_2362644_2362765_2363069_2363128_2363631_2363761_2364371_2364530_2366316_2366449_2366524_2366592_2366998_2367046_2369471_2369683_2371776_2371850_2372672_2372796_2374527_2374607_2375388_2375528_2376949_2377076_2378688_2378767_2379133_2379243_2379393_2379512_2380278
H1_mix_00077860	chr7	+	2974	20	NIC	ENSG00000106263.19	novel	3096	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	324	junction_1	580.438056945044	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCGGTCTTTCTCCTC	-36	True	NA	41	True	AATAAA	-15	NA	2354826	2380740	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_2355117_2355233_2355421_2360709_2360903_2362644_2362765_2363069_2363128_2363631_2363761_2364371_2364530_2366316_2366449_2366524_2366592_2366998_2367046_2369471_2369683_2371776_2371850_2372672_2372796_2374527_2374607_2375388_2375528_2376949_2377076_2378688_2378767_2379133_2379243_2379393_2379512_2380203
H1_mix_00077861	chr7	+	3745	5	FSM	ENSG00000106263.19	ENST00000475415.5	3745	5	0	0	0	0	multi-exon	FALSE	canonical	3	1087	junction_4	510.725158475672	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCGGTCTTTCTCCTC	560	False	NA	41	True	AATAAA	-15	NA	2373117	2380740	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_2375528_2376949_2377076_2378688_2379243_2379393_2379512_2380203
H1_mix_00077862	chr7	+	1871	5	FSM	ENSG00000106263.19	ENST00000468611.5	1868	5	0	-3	0	-2	multi-exon	FALSE	canonical	3	1097	junction_4	473.053577832363	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCGGTCTTTCTCCTCTCT	3417	False	NA	44	True	AATAAA	-18	NA	2375974	2380743	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_2377076_2378688_2378767_2379133_2379243_2379393_2379512_2380278
H1_mix_00077863	chr7	+	15717	2	FSM	ENSG00000136213.10	ENST00000258711.7	15979	2	0	262	0	-262	multi-exon	FALSE	canonical	3	83	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGAGACCCTGCTCTCGC	-9	True	NA	15	True	AATAAA	-26	NA	2403587	2448221	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_2403646_2432562
H1_mix_00077864	chr7	+	2062	2	NNC	ENSG00000136213.10	novel	15985	2	NA	NA	0	1200	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_1	0	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TACTAAAAAAAAAAAAAAAA	14	True	NA	NA	False	NA	NA	NA	2403610	2434575	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_2403660_2432562
H1_mix_00077865	chr7	+	2447	8	FSM	ENSG00000106003.14	ENST00000222725.10	2445	8	-2	0	-2	0	multi-exon	FALSE	canonical	3	29	junction_1	8.34706351885231	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGGGGTCCTGGTCTTG	-2	True	NA	34	True	AATAAA	-18	NA	2519771	2528429	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_2520294_2524694_2524744_2525218_2525319_2525413_2525568_2525684_2525771_2526243_2526410_2526835_2526922_2527145
H1_mix_00077866	chr7	+	6835	22	FSM	ENSG00000106012.18	ENST00000402050.7	6857	22	22	0	-20	0	multi-exon	TRUE	canonical	3	11	junction_1	9.72967967955095	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGAGTGCCCCGTGAAGA	-39	True	NA	17	True	AATAAA	-19	NA	2559000	2614728	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_2559218_2567115_2567164_2568953_2569000_2571525_2571655_2572191_2572327_2573417_2573489_2578241_2578356_2578475_2578527_2582579_2582651_2583636_2583710_2584235_2584286_2586207_2586372_2587821_2587878_2589906_2590107_2593021_2593127_2594885_2594977_2598464_2598633_2601440_2601465_2604880_2604992_2605875_2605998_2607123_2607228_2610043
H1_mix_00077867	chr7	+	6746	20	FSM	ENSG00000106012.18	ENST00000623361.3	6775	20	29	0	-20	0	multi-exon	FALSE	canonical	3	16	junction_1	8.15025108802078	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCCCCGTGAAGACTTCT	-39	True	NA	22	True	AATAAA	-24	NA	2559000	2614733	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_2559218_2571525_2571655_2572191_2572327_2573417_2573489_2578241_2578356_2578475_2578527_2582579_2582651_2583636_2583710_2584235_2584286_2586207_2586372_2587821_2587878_2589906_2590107_2593021_2593127_2594885_2594977_2598464_2598633_2601440_2601465_2604880_2604992_2605875_2605998_2607123_2607228_2610043
H1_mix_00077868	chr7	+	2241	18	FSM	ENSG00000106012.18	ENST00000470731.5	2251	18	0	10	0	-10	multi-exon	FALSE	canonical	3	11	junction_1	10.6009727307153	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCACTTTCAAAATCTCTT	8	True	NA	2	True	AATAAA	-14	NA	2559047	2601939	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_2559218_2567115_2567164_2568953_2569000_2571525_2571655_2572191_2572327_2573417_2573489_2578241_2578356_2578475_2578527_2582579_2582651_2583636_2583710_2584235_2584286_2586207_2586372_2587821_2587878_2589906_2590107_2593021_2593127_2594885_2594977_2598464_2598633_2601440
H1_mix_00077870	chr7	+	2400	21	FSM	ENSG00000106012.18	ENST00000476665.5	2400	21	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	9.87471518576612	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTTCTACTTTGTTAAA	39	True	NA	2	True	AGTAAA	-15	NA	2559078	2607555	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_2559218_2567115_2567164_2568953_2569000_2571525_2571655_2572191_2572327_2573417_2573489_2578241_2578356_2578475_2578527_2582579_2582651_2583636_2583710_2584235_2584286_2586207_2586372_2587821_2587878_2589906_2590107_2593021_2593127_2594885_2594977_2598464_2598633_2601440_2601465_2604880_2604992_2605875_2605998_2607123
H1_mix_00077872	chr7	+	4805	14	FSM	ENSG00000136295.15	ENST00000258796.12	4805	14	0	0	0	0	multi-exon	FALSE	canonical	3	1254	junction_5	132.594456674585	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTTCCTGAGCTGCT	-15	True	NA	25	True	AATAAA	-14	NA	2631985	2664802	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_2632279_2646852_2647023_2647141_2647254_2647417_2647639_2647958_2648055_2649566_2649640_2649912_2649989_2652186_2652243_2652917_2653011_2656091_2656185_2656397_2656535_2658285_2658460_2658939_2659016_2661667
H1_mix_00077873	chr7	+	4537	13	FSM	ENSG00000136295.15	ENST00000407643.5	4537	13	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_4	389.306934036486	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTCTCTTCCTGAGCTG	121	False	NA	23	True	AATAAA	-12	NA	2632155	2664800	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_2632279_2646852_2647023_2647141_2647254_2647417_2647639_2649566_2649640_2649912_2649989_2652186_2652243_2652917_2653011_2656091_2656185_2656397_2656535_2658285_2658460_2658939_2659016_2661667
H1_mix_00077874	chr7	+	560	3	FSM	ENSG00000136295.15	ENST00000400376.2	560	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	681	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCAGTGATGGCATCCAT	-15	True	NA	NA	False	NA	NA	NA	2645531	2647176	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_2645887_2646852_2647023_2647141
H1_mix_00077878	chr7	+	10593	45	FSM	ENSG00000146555.20	ENST00000404826.7	10593	45	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_13	8.74371084487833	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTGTGATTTTCTTCAAG	-2	True	NA	9	True	AATAAA	-22	NA	3301251	4269000	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_3301885_3619079_3619240_3639003_3639111_3641957_3642106_3821449_3821584_3950922_3951035_3951729_3951921_3958930_3959015_3962656_3962852_3967317_3967435_3969256_3969425_3971465_3971569_3974368_3974546_3987185_3987323_4010965_4011114_4012094_4012236_4017170_4017353_4049347_4049464_4051637_4051831_4067837_4067937_4076997_4077190_4079462_4079585_4110662_4110773_4113288_4113440_4114036_4114275_4127380_4127497_4129907_4130098_4132324_4132424_4145721_4145917_4149261_4149464_4158447_4158552_4161785_4161857_4174221_4174358_4175774_4175835_4178484_4178587_4205878_4205995_4208098_4208286_4210024_4210163_4220108_4220271_4221238_4221365_4233254_4233420_4237646_4237785_4241792_4241914_4245675_4245806_4265123
H1_mix_00077879	chr7	+	360	1	FSM	ENSG00000224593.1	ENST00000430569.1	476	1	111	5	111	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGATAGGTGTTAAAAACA	NA	False	NA	NA	False	NA	NA	NA	3338236	3338596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_3338200_3338600
H1_mix_00077880	chr7	+	333	2	FSM	ENSG00000146555.20	ENST00000478527.1	494	2	2	159	2	-159	multi-exon	FALSE	canonical	3	49	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATCTCAGATAGCATCCG	NA	False	NA	NA	False	NA	NA	NA	3950922	3951950	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_3951035_3951729
H1_mix_00077881	chr7	+	480	2	FSM	ENSG00000146555.20	ENST00000484011.1	493	2	0	13	0	-13	multi-exon	FALSE	canonical	3	26	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTTTGGTGTAGATGGTG	NA	False	NA	NA	False	NA	NA	NA	3971465	3974745	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_3971569_3974368
H1_mix_00077882	chr7	+	2958	20	FSM	ENSG00000146555.20	ENST00000476701.5	3113	20	155	0	155	0	multi-exon	FALSE	canonical	3	30	junction_19	7.45550048854039	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTGTGATTTTCTTCAAG	121	False	NA	9	True	AATAAA	-22	NA	4129839	4269000	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_4130098_4132324_4132424_4145721_4145917_4149261_4149464_4158447_4158552_4161785_4161857_4174221_4174358_4175774_4175835_4178484_4178587_4205878_4205995_4208098_4208286_4210024_4210163_4220108_4220271_4221238_4221365_4233254_4233420_4237646_4237785_4241792_4241914_4245675_4245806_4265123_4265249_4268677
H1_mix_00077883	chr7	+	251	1	FSM	ENSG00000286874.1	ENST00000667321.1	323	1	35	37	35	-37	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACGAATGGGGAGGAAAT	424	False	NA	NA	False	AATAAA	-1	NA	4642282	4642533	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_4642300_4642500
H1_mix_00077884	chr7	+	11194	9	FSM	ENSG00000164916.11	ENST00000328914.5	11194	9	0	0	0	0	multi-exon	TRUE	canonical	2	13	junction_7	3.63790805271381	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGCGGCTCCGGTGTGGT	10	True	NA	13	True	AATAAA	-21	NA	4682294	4771442	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_4682869_4740837_4741024_4754458_4754616_4755236_4755384_4756993_4757188_4759050_4759218_4759310_4759596_4761063_4761289_4762183
H1_mix_00077885	chr7	+	1438	2	FSM	ENSG00000164916.11	ENST00000496023.1	1928	2	322	168	322	-168	multi-exon	FALSE	canonical	3	22	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTCTACTGAAAATACAAAAA	NA	False	NA	NA	False	NA	NA	NA	4758330	4759861	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_4759218_4759310
H1_mix_00077886	chr7	+	2282	2	NNC	ENSG00000164916.11	novel	11194	9	NA	NA	10062	0	at_least_one_novel_splicesite	FALSE	non_canonical	2	27	junction_1	0	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGCGGCTCCGGTGTGGT	NA	False	NA	13	True	AATAAA	-21	NA	4768070	4771442	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_4769431_4770520
H1_mix_00077887	chr7	+	2585	1	ISM	ENSG00000164916.11	ENST00000328914.5	11194	9	86563	0	10849	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGCGGCTCCGGTGTGGT	NA	False	NA	13	True	AATAAA	-21	NA	4768857	4771442	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_4768900_4771400
H1_mix_00077888	chr7	+	5539	17	FSM	ENSG00000242802.9	ENST00000649063.2	5529	17	-10	0	-2	0	multi-exon	TRUE	canonical	3	113	junction_9	15.4958411759414	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGGGTCCACACTGCCT	-39	True	NA	16	True	AATAAA	-17	NA	4775612	4794397	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_4775757_4781174_4781313_4781567_4781755_4783315_4783461_4783688_4783799_4784202_4784372_4784907_4785049_4785414_4785453_4785521_4785685_4786249_4786429_4787633_4787777_4788153_4788295_4788839_4788952_4789831_4789930_4790458_4790592_4790672_4790888_4791114
H1_mix_00077889	chr7	+	2884	17	FSM	ENSG00000242802.9	ENST00000650310.1	2869	17	-15	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	37.8871164612722	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCAAGAAGAGCTGCAGTA	-29	True	NA	-23	True	NA	NA	NA	4775622	4791714	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_4775757_4781174_4781313_4781567_4781755_4783315_4783461_4783688_4783799_4784202_4784372_4784907_4785049_4785414_4785453_4785521_4785685_4786249_4786429_4787595_4787777_4788153_4788295_4788839_4788952_4789831_4789930_4790458_4790592_4790672_4790888_4791114
H1_mix_00077894	chr7	+	2222	6	FSM	ENSG00000196204.12	ENST00000404006.5	2201	6	-21	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	103.464003402149	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAACCTAGTCTGTGTCATC	-42	True	NA	16	True	ATTAAA	-16	NA	4974015	4998165	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_4974162_4976300_4976437_4983670_4983774_4984909_4985076_4989062_4989178_4996609
H1_mix_00077895	chr7	+	2293	7	NIC	ENSG00000196204.12	novel	2201	6	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	109.554273713484	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAACCTAGTCTGTGTCATC	-5	True	NA	16	True	ATTAAA	-16	NA	4974052	4998165	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_4974162_4976300_4976437_4983670_4983774_4984909_4985076_4989062_4989178_4995474_4995583_4996609
H1_mix_00077896	chr7	+	6612	5	FSM	ENSG00000146587.18	ENST00000396912.2	6612	5	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_1	15.1327459504216	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATTGTTTTTTGCATTTC	-5	True	NA	32	True	AATAAA	-35	NA	5045859	5069487	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_5046397_5048032_5048092_5057294_5057422_5057683_5057780_5063694
H1_mix_00077897	chr7	+	2327	12	FSM	ENSG00000157954.15	ENST00000401525.7	2112	12	-16	-199	-16	0	multi-exon	FALSE	canonical	3	212	junction_1	59.6158501304549	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTTCCTGTTGAAAAACT	NA	False	NA	12	True	ATTAAA	-20	NA	5190179	5231723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_5190494_5199575_5199659_5214534_5214705_5216562_5216660_5217089_5217188_5217921_5218015_5222601_5222673_5225822_5225931_5227179_5227345_5228103_5228212_5229607_5229739_5230834
H1_mix_00077898	chr7	+	4469	13	FSM	ENSG00000157954.15	ENST00000288828.9	4445	13	-24	0	13	0	multi-exon	FALSE	canonical	3	177	junction_1	78.8271667778452	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGATTTTTATTCAGTTCT	NA	False	NA	9	True	AATAAA	-34	NA	5190208	5233840	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_5190494_5193117_5193172_5199575_5199659_5214534_5214705_5216562_5216660_5217089_5217188_5217921_5218015_5222601_5222673_5225822_5225931_5227179_5227345_5228103_5228212_5229607_5229739_5230834
H1_mix_00077899	chr7	+	4436	13	FSM	ENSG00000157954.15	ENST00000404704.7	1663	13	-37	-2736	13	0	multi-exon	FALSE	canonical	3	177	junction_1	89.1884708543281	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGATTTTTATTCAGTTCT	NA	False	NA	9	True	AATAAA	-34	NA	5190208	5233840	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_5190494_5193117_5193172_5199575_5199659_5214534_5214705_5216562_5216660_5217089_5217188_5217921_5218015_5222601_5222673_5225822_5225931_5227179_5227345_5228103_5228212_5229607_5229706_5230834
H1_mix_00077900	chr7	+	1962	12	FSM	ENSG00000157954.15	ENST00000382384.6	1948	12	-14	0	0	0	multi-exon	FALSE	canonical	3	182	junction_11	75.789617466395	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGACCATTTTCCCTCCG	15	True	NA	-8	True	NA	NA	NA	5190258	5231470	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_5190494_5199575_5199659_5214534_5214705_5216562_5216660_5217089_5217188_5217921_5218015_5222601_5222673_5225822_5225931_5227179_5227345_5228103_5228212_5229607_5229706_5230834
H1_mix_00077901	chr7	+	5714	11	FSM	ENSG00000164638.11	ENST00000396872.8	5714	11	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	16.5057565715722	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAAGTCTGGCTTTTCCT	-4	True	NA	NA	False	CATAAA	-33	NA	5282942	5306912	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_5283083_5287808_5287986_5290731_5290864_5291123_5291238_5291692_5291822_5294859_5294935_5296935_5297199_5298987_5299127_5299239_5299428_5300421_5300663_5302796
H1_mix_00077902	chr7	+	2672	10	NIC	ENSG00000164638.11	novel	2839	11	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	30.1445079247396	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCCGCCTGCAAGCAGAGT	NA	False	NA	28	True	ATTAAA	-22	NA	5282918	5304060	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_5283083_5290731_5290864_5291123_5291238_5291729_5291822_5294859_5294935_5296935_5297199_5298987_5299127_5299239_5299428_5300421_5300663_5302796
H1_mix_00077904	chr7	+	2846	11	FSM	ENSG00000164638.11	ENST00000297195.8	2839	11	-7	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	22.973027662892	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCCGCCTGCAAGCAGAGT	15	False	NA	28	True	ATTAAA	-22	NA	5282961	5304060	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_5283083_5287805_5287986_5290731_5290864_5291123_5291238_5291692_5291822_5294859_5294935_5296935_5297199_5298987_5299127_5299239_5299428_5300421_5300663_5302796
H1_mix_00077905	chr7	+	2734	11	FSM	ENSG00000164638.11	ENST00000406453.3	2734	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	31.6569107779012	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCCGCCTGCAAGCAGAGT	82	False	NA	28	True	ATTAAA	-22	NA	5283028	5304060	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_5283083_5287808_5287986_5290731_5290864_5291123_5291238_5291729_5291822_5294864_5294935_5296935_5297199_5298987_5299127_5299239_5299428_5300421_5300663_5302796
H1_mix_00077906	chr7	+	632	1	FSM	ENSG00000272953.1	ENST00000609130.1	632	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCAATGGCGTTTGCAT	9	True	NA	6	True	AATAAA	-23	NA	5425769	5426401	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_5425800_5426400
H1_mix_00077907	chr7	+	2803	5	FSM	ENSG00000075618.18	ENST00000382361.8	2784	5	-19	0	-19	0	multi-exon	FALSE	canonical	3	1139	junction_2	70.1248885917119	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCGGCCTGTGTGTGTCTT	NA	False	NA	32	True	AATAAA	-22	NA	5592796	5606655	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_5593769_5603256_5603414_5603495_5603618_5603862_5604031_5605271
H1_mix_00077908	chr7	+	2161	4	FSM	ENSG00000075618.18	ENST00000473330.1	2215	4	55	-1	55	0	multi-exon	FALSE	canonical	3	1139	junction_1	80.8743881996437	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCGGCCTGTGTGTGTCTT	4433	False	NA	32	True	AATAAA	-22	NA	5602926	5606655	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_5603414_5603495_5603618_5603862_5604031_5605271
H1_mix_00077909	chr7	+	1708	6	FSM	ENSG00000235944.9	ENST00000434898.6	1737	6	29	0	20	0	multi-exon	FALSE	canonical	2	2	junction_5	5.88557558782486	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCATGGGTGAAGAGACC	24	True	NA	NA	False	NA	NA	NA	5823235	5847743	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_5823527_5831180_5831284_5833526_5833569_5839948_5840076_5840689_5840857_5846765
H1_mix_00077910	chr7	+	412	2	NNC	ENSG00000235944.9	novel	1068	5	NA	NA	2420	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGGGTTCTGTGGACTG	NA	False	NA	14	True	AGTAAA	-25	NA	5849741	5854437	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_5849823_5854106
H1_mix_00077911	chr7	+	2062	3	FSM	ENSG00000122674.12	ENST00000478672.1	2062	3	0	0	0	0	multi-exon	FALSE	canonical	3	2018	junction_2	178	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGGA	3	True	NA	NA	False	NA	NA	NA	5898780	5902297	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_5898920_5900283_5900382_5900472
H1_mix_00077912	chr7	+	2379	15	FSM	ENSG00000122674.12	ENST00000325974.9	2379	15	0	0	0	0	multi-exon	FALSE	canonical	3	1156	junction_8	306.421153756375	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGCAAACATGAGAAGGT	-2	True	NA	NA	False	NA	NA	NA	5898732	5926550	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_5898920_5900283_5900382_5900472_5900567_5900854_5900933_5901656_5901705_5902660_5902745_5905093_5905270_5910034_5910117_5911860_5911923_5912842_5912955_5918866_5918901_5919848_5919967_5923386_5923546_5923834_5923963_5925631
H1_mix_00077913	chr7	+	2867	4	FSM	ENSG00000122674.12	ENST00000474507.1	2867	4	0	0	0	0	multi-exon	FALSE	canonical	3	1584	junction_1	204.250390996498	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTCTGGTTTGGTGTTG	NA	False	NA	16	True	AATAAA	-16	NA	5917725	5925970	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_5919967_5923386_5923546_5923834_5923963_5925631
H1_mix_00077914	chr7	+	1215	4	FSM	ENSG00000106305.10	ENST00000223029.8	1198	4	-17	0	0	0	multi-exon	FALSE	canonical	3	609	junction_3	30.5068298363935	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTTTCATTTTATTTAAA	-26	True	NA	28	True	AATAAA	-17	NA	6009254	6023834	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_6009499_6015145_6015353_6017813_6018046_6023302
H1_mix_00077915	chr7	+	860	3	FSM	ENSG00000106305.10	ENST00000395236.2	860	3	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	242	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATCAGTAAGGGGACTT	35	True	NA	-59	True	TTTAAA	-36	NA	6009315	6023747	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_6009499_6017813_6018046_6023302
H1_mix_00077916	chr7	+	5161	18	FSM	ENSG00000106346.12	ENST00000306177.10	5090	18	-71	0	-71	0	multi-exon	FALSE	canonical	3	101	junction_14	19.5959179422654	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGCGTCTTTTTACTG	NA	False	NA	23	True	TATAAA	-16	NA	6104877	6161564	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_6105033_6111124_6111375_6115322_6115524_6135840_6135952_6139091_6139195_6140127_6140196_6140913_6140985_6142931_6143015_6144084_6144197_6145515_6145657_6146147_6146249_6147738_6147893_6149582_6150303_6150411_6150507_6153755_6155196_6156753_6157056_6159449_6159494_6160554
H1_mix_00077921	chr7	+	7409	13	ISM	ENSG00000106346.12	ENST00000521713.1	5017	17	32036	-931	20578	-2	3prime_fragment	FALSE	canonical	3	101	junction_9	16.5847989302118	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTTGGCGTCTTTTTAC	NA	False	NA	21	True	TATAAA	-14	NA	6137057	6161562	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_6140196_6140913_6140985_6142931_6143015_6144084_6144197_6145515_6145657_6146147_6146249_6147738_6147893_6149582_6150303_6150411_6150507_6153755_6155196_6156753_6157056_6159449_6159494_6160554
H1_mix_00077922	chr7	+	2309	6	FSM	ENSG00000136238.18	ENST00000348035.9	2309	6	0	0	0	0	multi-exon	FALSE	canonical	3	2693	junction_1	50.6201540890582	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACTGGTAATACTGGTGTT	1	True	NA	14	True	AATAAA	-14	NA	6374526	6403967	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_6374771_6387211_6387284_6391923_6392042_6400125_6400189_6401867_6402028_6402315
H1_mix_00077924	chr7	+	4110	2	FSM	ENSG00000136238.18	ENST00000495499.1	615	2	-2034	-1461	-239	14	multi-exon	FALSE	canonical	3	2809	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTTTTGAGACTTGATG	7605	False	NA	28	True	AATAAA	-28	NA	6399583	6403981	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_6402028_6402315
H1_mix_00077926	chr7	+	1369	8	FSM	ENSG00000136247.15	ENST00000405731.7	1348	8	-21	0	-21	0	multi-exon	FALSE	canonical	3	30	junction_1	118.47810440959	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTAGTTCCCGTTTATTT	-40	True	NA	19	True	AAGAAA	-31	NA	6577412	6588931	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_6577499_6578500_6578721_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
H1_mix_00077927	chr7	+	1482	9	FSM	ENSG00000136247.15	ENST00000396707.6	1461	9	-21	0	-21	0	multi-exon	FALSE	canonical	3	59	junction_1	114.197676749573	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTTGTTTGTTTTGATT	-40	True	NA	22	True	NA	NA	NA	6577412	6588978	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_6577499_6577589_6577721_6578565_6578721_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
H1_mix_00077928	chr7	+	1573	8	FSM	ENSG00000136247.15	ENST00000396713.6	1552	8	-21	0	-21	0	multi-exon	FALSE	canonical	3	160	junction_1	74.6223143296854	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTTGTTTGTTTTGATT	-40	True	NA	22	True	NA	NA	NA	6577412	6588978	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_6577721_6578565_6578721_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
H1_mix_00077929	chr7	+	1706	8	FSM	ENSG00000136247.15	ENST00000335965.11	1706	8	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	78.260944986654	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTATGGGCTTGTACATCA	1	True	NA	NA	False	NA	NA	NA	6577453	6589374	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_6577499_6578565_6578721_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
H1_mix_00077931	chr7	+	1942	8	FSM	ENSG00000136247.15	ENST00000396706.2	1942	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	111.987061934923	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTATGGGCTTGTACATCA	52	False	NA	NA	False	NA	NA	NA	6577504	6589374	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_6577721_6578500_6578721_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
H1_mix_00077932	chr7	+	2178	6	FSM	ENSG00000146576.13	ENST00000344417.10	2178	6	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_5	14.0285423334001	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGACTTTATGGAATGTA	7	True	NA	24	True	AATAAA	-17	NA	6590020	6608726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_6590476_6591645_6591868_6594434_6594601_6599828_6600357_6602100_6602141_6607959
H1_mix_00077933	chr7	+	2228	7	NIC	ENSG00000146576.13	novel	2178	6	NA	NA	11	0	intron_retention	FALSE	canonical	3	26	junction_6	33.9296658135948	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGACTTTATGGAATGTA	18	True	NA	24	True	AATAAA	-17	NA	6590031	6608726	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_6590476_6591645_6591868_6594434_6594601_6599828_6600357_6602100_6602141_6607536_6607598_6607959
H1_mix_00077934	chr7	+	3887	3	NNC	ENSG00000236609.4	novel	3864	3	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	14.5	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTTGTCTTGGTGTTTT	282	False	NA	14	True	AATAAA	-20	NA	6615591	6624290	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_6616187_6617184_6617308_6621121
H1_mix_00077935	chr7	+	3882	3	FSM	ENSG00000236609.4	ENST00000457543.4	3864	3	-18	0	-18	0	multi-exon	FALSE	canonical	3	39	junction_1	17	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTTGTCTTGGTGTTTT	282	False	NA	14	True	AATAAA	-20	NA	6615591	6624290	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_6616187_6617189_6617308_6621121
H1_mix_00077936	chr7	+	5985	9	FSM	ENSG00000205903.7	ENST00000382252.6	7243	9	-76	1334	-76	-1334	multi-exon	FALSE	canonical	3	33	junction_1	9.12414379544733	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTGTGGGTCTGAAAA	NA	False	NA	NA	False	NA	NA	NA	6637241	6656945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_6637448_6637845_6638010_6639041_6639142_6641824_6641963_6642381_6642765_6642963_6643074_6643821_6643949_6644479_6644594_6652302
H1_mix_00077937	chr7	+	939	4	FSM	ENSG00000205903.7	ENST00000614588.1	939	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	6.68331255192114	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGAGGATGGCGGCGCTC	17	True	NA	NA	False	NA	NA	NA	6637349	6642401	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_6637448_6637845_6638010_6639041_6639142_6641824
H1_mix_00077943	chr7	+	2231	4	NNC	ENSG00000106392.11	novel	1777	3	NA	NA	267	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	199.419156552223	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGGCCTTGACTATATT	12	False	NA	28	True	AATAAA	-18	NA	7182896	7244350	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_7183396_7234302_7234540_7238254_7238923_7243523
H1_mix_00077944	chr7	+	7816	3	FSM	ENSG00000106392.11	ENST00000223122.4	1777	3	-1773	-4266	-1773	0	multi-exon	FALSE	canonical	3	465	junction_2	3	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTTCATCTGATTATTT	NA	False	NA	16	True	AATAAA	-15	NA	7232484	7248616	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_7234540_7238254_7238923_7243523
H1_mix_00077945	chr7	+	3100	12	FSM	ENSG00000164654.16	ENST00000405785.5	3095	12	-5	0	-5	0	multi-exon	FALSE	canonical	3	19	junction_1	97.4089954608619	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCAGTTTTGATGTTTGA	-46	True	NA	9	True	AATAAA	-14	NA	7566869	7607223	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_7567073_7568025_7568124_7572435_7573770_7574097_7574197_7583117_7583373_7585635_7585806_7588497_7588564_7589404_7589564_7594979_7595133_7596256_7596462_7605941_7606072_7606995
H1_mix_00077947	chr7	+	602	2	FSM	ENSG00000164654.16	ENST00000433635.1	602	2	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACTCCTGATATAGTTCC	45	True	NA	NA	False	NA	NA	NA	7566960	7572925	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_7567073_7572435
H1_mix_00077948	chr7	+	3124	11	NIC	ENSG00000164654.16	novel	4877	13	NA	NA	-30	275	combination_of_known_junctions	FALSE	canonical	3	69	junction_1	79.1646385705133	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACAATAGTTTTAAGTTC	-23	True	NA	23	True	AATAAA	-41	NA	7567022	7607498	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_7567073_7572435_7573770_7574097_7574197_7583117_7583373_7585635_7585806_7588497_7588564_7589404_7589564_7594979_7595133_7596256_7596462_7605941_7606072_7606995
H1_mix_00077949	chr7	+	844	4	FSM	ENSG00000164654.16	ENST00000433056.5	844	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	50.2814301926887	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGCCTGGTATCTTAA	7	True	NA	11	True	AATAAA	-23	NA	7567052	7572667	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_7567485_7567606_7567689_7568025_7568124_7572435
H1_mix_00077950	chr7	+	3533	12	NIC	ENSG00000164654.16	novel	4877	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	114	junction_1	76.5997432186102	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCAGTTTTGATGTTTGA	7	True	NA	9	True	AATAAA	-14	NA	7567052	7607223	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_7567689_7568025_7568124_7572435_7573770_7574097_7574197_7583117_7583373_7585635_7585806_7588497_7588564_7589404_7589564_7594979_7595133_7596256_7596462_7605941_7606072_7606995
H1_mix_00077952	chr7	+	559	5	FSM	ENSG00000219545.12	ENST00000463725.5	559	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	54.9408773137088	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCGACCACTTACTCTCC	9	True	NA	NA	False	NA	NA	NA	7640751	7877443	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_7640822_7673308_7673454_7676101_7676209_7801669_7801744_7877280
H1_mix_00077954	chr7	+	586	3	NNC	ENSG00000219545.12	novel	570	4	NA	NA	6	-17528	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	28.5	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCATTTGGATTTTTGA	20	True	NA	NA	False	AATACA	-18	NA	7640762	7721294	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_7640822_7673308_7673454_7720912
H1_mix_00077955	chr7	+	569	4	FSM	ENSG00000219545.12	ENST00000482067.3	569	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	44.2141254452566	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTATTACATTACATCT	51	False	NA	NA	False	AATAAA	-18	NA	7640793	7968020	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_7640822_7673308_7673454_7801669_7801744_7967698
H1_mix_00077957	chr7	+	4746	8	FSM	ENSG00000106415.13	ENST00000223145.10	4741	8	-5	0	-5	0	multi-exon	FALSE	canonical	3	60	junction_3	31.4525882261293	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTCACACATGTTTTTGG	-9	True	NA	14	True	AATAAA	-20	NA	7968790	8089080	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_7969808_8003907_8004060_8022482_8022570_8055432_8055550_8060095_8060249_8070920_8071132_8084896_8085018_8086192
H1_mix_00077958	chr7	+	3665	8	NNC	ENSG00000106415.13	novel	4741	8	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	19	junction_5	47.885066480446	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGTTCACACATGTTTT	365	False	NA	11	True	AATAAA	-17	NA	7969706	8089077	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_7969808_8003907_8004060_8022482_8022570_8055432_8055550_8060095_8060249_8071082_8071132_8084896_8085018_8086192
H1_mix_00077959	chr7	+	3942	2	FSM	ENSG00000106415.13	ENST00000482540.1	3942	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGTTCACACATGTTTT	6437	False	NA	11	True	AATAAA	-17	NA	8070074	8089077	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_8071132_8086192
H1_mix_00077960	chr7	+	442	2	FSM	ENSG00000244239.1	ENST00000458624.1	429	2	-13	0	-13	0	multi-exon	FALSE	canonical	3	10	junction_1	0	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTGTATGTATAGGTATA	7	True	NA	20	True	AATAAA	-19	NA	8262219	8262821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_8262420_8262579
H1_mix_00077962	chr7	+	2022	1	FSM	ENSG00000197320.5	ENST00000443027.1	2032	1	-152	162	-152	-162	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTTTCCAGGAACTGGAA	16	False	NA	NA	False	NA	NA	NA	9726088	9728110	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_9726100_9728100
H1_mix_00077964	chr7	+	8258	16	FSM	ENSG00000106443.17	ENST00000521747.5	2479	16	-29	-5750	-29	-1925	multi-exon	FALSE	canonical	3	12	junction_15	61.8954674341255	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTTTGCTACTTAGTCT	8	True	NA	NA	False	NA	NA	NA	10973842	11108396	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_10974325_10974834_10974946_10990702_10990848_11013746_11013907_11022867_11022980_11028680_11028819_11035639_11035787_11036417_11036689_11036984_11037092_11038759_11038856_11040671_11040776_11042682_11042815_11051611_11051781_11061790_11061842_11061963_11062086_11102485
H1_mix_00077965	chr7	+	2724	17	FSM	ENSG00000106443.17	ENST00000423760.6	2627	17	-102	5	-85	0	multi-exon	FALSE	canonical	3	27	junction_2	44.2658428559764	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAGCTTGTATTTGGAAT	452	False	NA	12	True	AATAAA	-17	NA	10973786	11169618	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_10974325_10974834_10974946_10990702_10990848_11013746_11013907_11022867_11022980_11028680_11028819_11035639_11035787_11036417_11036689_11036984_11037092_11038759_11038856_11040671_11040776_11042682_11042815_11051611_11051781_11061790_11061842_11061963_11062086_11111349_11111468_11169415
H1_mix_00077966	chr7	+	3427	18	FSM	ENSG00000106443.17	ENST00000634607.2	3427	18	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_3	23.9883189566668	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAGCTTGTATTTGGAAT	-24	True	NA	12	True	AATAAA	-17	NA	10973871	11169618	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_10974325_10974834_10974946_10982371_10983160_10990702_10990848_11013746_11013907_11022867_11022980_11028680_11028819_11035639_11035787_11036417_11036689_11036984_11037092_11038759_11038856_11040671_11040776_11042682_11042815_11051611_11051781_11061790_11061842_11061963_11062086_11111349_11111468_11169415
H1_mix_00077969	chr7	+	695	2	FSM	ENSG00000106443.17	ENST00000473050.1	695	2	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTATTTGGAATTCGTA	NA	False	NA	17	True	AATAAA	-22	NA	11110980	11169623	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_11111468_11169415
H1_mix_00077974	chr7	+	1320	3	FSM	ENSG00000122644.13	ENST00000396662.5	1296	3	-24	0	-24	0	multi-exon	FALSE	canonical	2	22	junction_1	17.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTAGTGTTTTGTGCTTAC	7	False	NA	16	True	AATAAA	-17	NA	12686831	12689179	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_12687044_12687634_12687729_12688165
H1_mix_00077975	chr7	+	1147	2	FSM	ENSG00000122644.13	ENST00000356797.7	1147	2	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTAGTGTTTTGTGCT	24	True	NA	13	True	AATAAA	-14	NA	12686907	12689176	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_12687044_12688165
H1_mix_00077976	chr7	+	3211	2	FSM	ENSG00000122644.13	ENST00000396664.2	1144	2	-155	-1912	-103	130	multi-exon	FALSE	canonical	3	138	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCACCTTTTCTAGTGCATA	NA	False	NA	NA	False	NA	NA	NA	12686752	12691088	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_12687044_12688168
H1_mix_00077977	chr7	+	3212	2	FSM	ENSG00000122644.13	ENST00000396663.2	3212	2	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACAATTTCAGCTATAAAA	283	False	NA	NA	False	TATAAA	-1	NA	12687285	12690934	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_12687729_12688165
H1_mix_00077978	chr7	+	4008	2	FSM	ENSG00000122644.13	ENST00000404894.1	840	2	0	-3168	0	1124	multi-exon	FALSE	canonical	3	66	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGTAATAGTCTCAACAAA	2	True	NA	NA	False	ATTAAA	-15	NA	12687634	12692082	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_12687729_12688168
H1_mix_00077981	chr7	+	1825	12	FSM	ENSG00000136261.16	ENST00000258761.8	1804	12	-21	0	0	0	multi-exon	FALSE	canonical	3	420	junction_1	59.9545282238586	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGGCTTATATTGTCAGA	-8	True	NA	17	True	AATAAA	-15	NA	16646159	16706517	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_16646289_16665436_16665502_16674411_16674589_16681300_16681405_16682779_16682846_16685904_16686041_16689796_16689907_16694833_16695005_16696914_16697062_16698047_16698187_16704546_16704670_16706059
H1_mix_00077982	chr7	+	1881	6	FSM	ENSG00000106537.8	ENST00000262067.5	1873	6	-8	0	-8	0	multi-exon	FALSE	canonical	3	411	junction_5	27.9814224084481	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTGAGGTGGAATTCTT	-20	True	NA	20	True	ATTAAA	-30	NA	16753746	16784536	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_16754031_16776210_16776379_16777041_16777123_16777797_16777912_16779002_16779117_16783416
H1_mix_00077985	chr7	+	4427	13	FSM	ENSG00000048052.24	ENST00000681950.1	4407	13	-20	0	10	0	multi-exon	FALSE	canonical	0	0	junction_11	28.5349444638597	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTGAAGGTGATCTCTT	-25	True	NA	-96	True	GATAAA	-39	NA	18495724	18668731	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_18496024_18496261_18496325_18585280_18585523_18590335_18590487_18591515_18591637_18593907_18594030_18629349_18629482_18634626_18634743_18644670_18644794_18647784_18647999_18648465_18648684_18654762_18654870_18666212
H1_mix_00077987	chr7	+	4260	12	FSM	ENSG00000048052.24	ENST00000405010.7	4239	12	-21	0	10	0	multi-exon	FALSE	canonical	3	12	junction_3	23.2304303137498	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCTTTCATACACTTGGC	-25	True	NA	16	True	AATAAA	-16	NA	18495724	18668843	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_18495855_18496261_18496325_18585280_18585523_18590344_18590487_18591515_18591643_18593907_18594030_18629349_18629482_18634626_18634743_18644670_18644794_18647784_18647999_18648465_18648684_18666212
H1_mix_00077990	chr7	+	377	1	Genic_Genomic	ENSG00000228598.1	novel	NA	NA	NA	NA	11250	11	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGGAGAAAAATATGTGTT	NA	False	NA	16	True	AATAAA	-27	NA	20153165	20153542	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr7_+_20153200_20153500
H1_mix_00077991	chr7	+	686	4	FSM	ENSG00000233834.7	ENST00000439058.6	727	4	22	19	-6	-16	multi-exon	FALSE	canonical	3	17	junction_2	11.5758369027902	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCATTCCATTAACAAAT	-13	True	NA	NA	False	ATTAAA	-12	NA	20217557	20221681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_20217623_20218255_20218364_20219582_20219757_20221342
H1_mix_00077992	chr7	+	768	5	FSM	ENSG00000233834.7	ENST00000430859.2	798	5	11	19	8	-16	multi-exon	FALSE	canonical	3	17	junction_1	11.1579568022107	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCATTCCATTAACAAAT	9501	False	NA	NA	False	ATTAAA	-12	NA	20217546	20221681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_20217623_20217787_20217859_20218255_20218364_20219582_20219757_20221342
H1_mix_00077993	chr7	+	623	2	FSM	ENSG00000233834.7	ENST00000439446.1	676	2	53	0	53	0	multi-exon	FALSE	canonical	3	44	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTGTATGTGTCTGTG	925	False	NA	NA	False	ATTAAA	-31	NA	20219491	20221700	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_20219757_20221342
H1_mix_00077994	chr7	+	4595	1	Genic_Genomic	ENSG00000105855.10	novel	NA	NA	NA	NA	46522	7	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAACGCTTCCTTATTTAC	272	False	NA	20	True	AATAAA	-23	NA	20411166	20415761	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr7_+_20411200_20415800
H1_mix_00077996	chr7	+	6445	6	FSM	ENSG00000105866.15	ENST00000222584.8	6077	6	-368	0	-328	0	multi-exon	FALSE	canonical	3	64	junction_1	15.564061166675	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATCATGAACACTGGAGA	171	False	NA	7	True	AATAAA	-21	NA	21427714	21514822	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_21428259_21428676_21428793_21429288_21430844_21477078_21477308_21481923_21482124_21511021
H1_mix_00078002	chr7	+	1886	4	FSM	ENSG00000228649.10	ENST00000415611.8	1938	4	52	0	19	0	multi-exon	FALSE	canonical	2	4	junction_3	6.54896090146283	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGCATGGTTTATAACAA	NA	False	NA	NA	False	NA	NA	NA	22854177	22860274	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_22854281_22856521_22856557_22856972_22857017_22858570
H1_mix_00078003	chr7	+	1085	6	FSM	ENSG00000228649.10	ENST00000661147.1	1063	6	-22	0	19	0	multi-exon	FALSE	canonical	1	2	junction_5	6.8585712797929	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATGCGTATTATATTTC	NA	False	NA	NA	False	AATATA	-33	NA	22854177	22861436	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_22854281_22856521_22856557_22856972_22857017_22858570_22858831_22860546_22860639_22860885
H1_mix_00078006	chr7	+	3181	12	FSM	ENSG00000122550.18	ENST00000521082.5	3165	12	-16	0	-16	0	multi-exon	FALSE	canonical	3	69	junction_1	266.58039582463	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACTCATTTCCTTCCTA	8	False	NA	5	True	AATAAA	-15	NA	23105741	23175302	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_23106147_23117833_23117965_23123776_23123880_23124687_23124782_23125047_23125173_23140768_23140945_23143850_23144026_23152066_23152210_23165697_23165939_23167835_23168038_23172947_23173046_23174014
H1_mix_00078008	chr7	+	969	5	FSM	ENSG00000122550.18	ENST00000322275.9	969	5	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_4	219.679738483093	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATATGCTAGCATCACTAC	-1	True	NA	6	True	AATAAA	-16	NA	23105784	23126045	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_23106147_23123776_23123880_23124687_23124782_23125047_23125173_23125760
H1_mix_00078009	chr7	+	5619	11	FSM	ENSG00000122550.18	ENST00000339077.10	5619	11	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_8	192.954631973425	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTCTATATTCCTTTTGC	-1	True	NA	NA	False	AATAAA	-16	NA	23105784	23177914	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_23106147_23123776_23123880_23124687_23124782_23125047_23125173_23140768_23140945_23143850_23144026_23152066_23152210_23165697_23165939_23167835_23168038_23172947_23173046_23174014
H1_mix_00078010	chr7	+	1695	8	NIC	ENSG00000122550.18	novel	5619	11	NA	NA	4	348	combination_of_known_junctions	FALSE	canonical	3	46	junction_7	298.434213172412	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTATTTGGATTCCTCC	8	True	NA	6	True	AATAAA	-19	NA	23105793	23156516	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_23106147_23123776_23123880_23124687_23124782_23125047_23125173_23140768_23140945_23143850_23144026_23152066_23152210_23155990
H1_mix_00078011	chr7	+	1236	6	FSM	ENSG00000122550.18	ENST00000410047.1	1233	6	-3	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	407.073654269101	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATATGCTAGCATCACT	19	False	NA	4	True	AATAAA	-14	NA	23106294	23126043	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_23106795_23117833_23117965_23123776_23123880_23124687_23124782_23125047_23125173_23125760
H1_mix_00078012	chr7	+	6375	11	FSM	ENSG00000122550.18	ENST00000409689.5	3231	11	-510	-2634	0	108	multi-exon	FALSE	canonical	3	67	junction_1	248.730697743564	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATACCAAAGACTTGAGAAA	-1	True	NA	NA	False	NA	NA	NA	23105784	23178022	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_23106795_23123776_23123880_23124687_23124782_23125047_23125173_23140768_23140945_23143850_23144026_23152066_23152210_23165697_23165939_23167835_23168038_23172947_23173046_23174014
H1_mix_00078018	chr7	+	1417	6	FSM	ENSG00000136243.18	ENST00000437140.5	1285	6	-88	-44	-46	0	multi-exon	TRUE	canonical	3	4	junction_1	49.0118353053627	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTACTGTCTCACAATTTA	-3	True	NA	23	True	AATAAA	-23	NA	23181977	23201011	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_23182207_23187051_23187147_23195838_23195916_23196679_23196767_23199457_23199543_23200167
H1_mix_00078019	chr7	+	1595	7	FSM	ENSG00000136243.18	ENST00000258742.10	1571	7	-24	0	0	0	multi-exon	FALSE	canonical	3	99	junction_3	16.6474889664745	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCACTTTACTGTCTCACA	-10	True	NA	18	True	AATAAA	-18	NA	23182023	23201006	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_23182207_23185069_23185299_23187051_23187147_23195838_23195916_23196679_23196767_23199457_23199543_23200167
H1_mix_00078020	chr7	+	1476	6	NIC	ENSG00000136243.18	novel	1571	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_3	52.4572206659865	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCACTTTACTGTCTCACA	32	True	NA	18	True	AATAAA	-18	NA	23182065	23201006	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_23182207_23185069_23185299_23187051_23187147_23196679_23196767_23199457_23199543_23200167
H1_mix_00078022	chr7	+	2604	4	FSM	ENSG00000136243.18	ENST00000477844.1	2529	4	-119	44	-119	0	multi-exon	FALSE	canonical	3	126	junction_3	3.68178700572909	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAATTATGCACGAATA	6258	False	NA	-21	True	NA	NA	NA	23194283	23200967	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_23195916_23196679_23196767_23199457_23199543_23200167
H1_mix_00078024	chr7	+	2926	4	FSM	ENSG00000156928.5	ENST00000466681.2	2905	4	-21	0	-21	0	multi-exon	FALSE	canonical	3	556	junction_3	42.6015127535266	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAAGTATATAAAATTTT	-13	True	NA	NA	False	TTTAAA	-35	NA	23299317	23311729	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_23299609_23300838_23301018_23307867_23307950_23309355
H1_mix_00078027	chr7	+	2472	4	FSM	ENSG00000169193.12	ENST00000307471.8	2470	4	-2	0	-2	0	multi-exon	FALSE	canonical	3	72	junction_2	9.46337971105226	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTATTACAGTCTTTTT	-35	True	NA	60	True	AATAAA	-19	NA	23597379	23644708	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_23597606_23597966_23598052_23611170_23611554_23642930
H1_mix_00078028	chr7	+	622	3	FSM	ENSG00000169193.12	ENST00000484553.5	625	3	0	3	0	-3	multi-exon	FALSE	canonical	3	12	junction_2	41.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTATCCATGTTTTTCT	1	True	NA	NA	False	AATAAA	-19	NA	23597415	23602217	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_23597606_23597966_23598052_23601870
H1_mix_00078030	chr7	+	2530	5	FSM	ENSG00000169193.12	ENST00000448353.5	847	5	0	-1683	0	0	multi-exon	FALSE	canonical	3	24	junction_2	30.7520324531567	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGTATTACAGTCTTTT	10	False	NA	59	True	AATAAA	-18	NA	23597514	23644707	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_23597606_23597966_23598052_23604085_23604280_23611170_23611554_23642930
H1_mix_00078034	chr7	+	1141	5	FSM	ENSG00000188732.11	ENST00000409994.3	1136	5	-5	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	57.8937604582739	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTAGTGATATTACTGA	-8	True	NA	22	True	AATAAA	-25	NA	23680178	23702650	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_23680284_23689268_23689460_23691389_23691597_23700785_23700869_23702095
H1_mix_00078035	chr7	+	4728	8	FSM	ENSG00000188732.11	ENST00000462546.5	4154	8	-574	0	-525	0	multi-exon	FALSE	canonical	3	14	junction_4	93.364110571767	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTAGTGATATTACTGA	NA	False	NA	22	True	AATAAA	-25	NA	23679604	23702650	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_23680284_23684498_23684673_23689268_23689460_23691389_23691597_23692182_23694914_23698191_23698300_23700785_23700869_23702095
H1_mix_00078036	chr7	+	1423	7	FSM	ENSG00000188732.11	ENST00000344962.9	1403	7	-20	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	81.2679040102686	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTAGTGATATTACTGA	-8	True	NA	22	True	AATAAA	-25	NA	23680178	23702650	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_23680284_23684498_23684673_23689268_23689460_23691389_23691597_23698191_23698300_23700785_23700869_23702095
H1_mix_00078037	chr7	+	1479	8	NIC	ENSG00000188732.11	novel	4154	8	NA	NA	4	1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_5	95.3412774388589	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCATTTTCTAGTGATAT	1	True	NA	16	True	AATAAA	-19	NA	23680187	23702644	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_23680284_23684498_23684673_23689268_23689460_23691389_23691597_23692182_23692254_23698191_23698300_23700785_23700869_23702095
H1_mix_00078038	chr7	+	1196	6	NNC	ENSG00000188732.11	novel	1403	7	NA	NA	-3	-26	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_4	99.6333277573323	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAATAAAAACTATCTCAA	9	True	NA	-11	True	NA	NA	NA	23680195	23702617	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_23680284_23689268_23689460_23691389_23691597_23698191_23698300_23700788_23700869_23702095
H1_mix_00078040	chr7	+	747	3	FSM	ENSG00000122585.8	ENST00000405982.1	565	3	-158	-24	-158	-14	multi-exon	FALSE	canonical	3	13	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGCATTCAAAAGTGTAT	760	False	NA	-9	True	AATAAA	-4	NA	24284948	24291848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_24285429_24289498_24289580_24291662
H1_mix_00078041	chr7	+	3575	1	Intergenic	novelGene_1349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTGACATTCACCCCATT	26	False	NA	NA	False	NA	NA	NA	24396607	24400182	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_24396600_24400200
H1_mix_00078044	chr7	+	8346	12	FSM	ENSG00000105926.16	ENST00000222644.10	8346	12	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	45.6577277048864	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTATTGATTTTTCAGA	-6	True	NA	5	True	AATAAA	-18	NA	24573451	24694193	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_24573594_24623665_24623785_24641715_24641869_24649611_24649765_24650484_24650713_24663589_24663722_24665587_24665688_24666020_24666090_24668498_24668661_24679130_24679334_24680391_24680521_24687437
H1_mix_00078047	chr7	+	3762	4	FSM	ENSG00000050344.9	ENST00000056233.4	3740	4	-22	0	-22	0	multi-exon	FALSE	canonical	3	409	junction_2	31.3829394558395	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCTAGTATGCTTCTAG	NA	False	NA	-32	True	AATAAA	-31	NA	26152175	26187137	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_26153069_26177942_26178123_26183700_26183785_26184532
H1_mix_00078048	chr7	+	2258	1	FSM	ENSG00000050344.9	ENST00000606261.1	2258	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGAACCAAATTTACCTTA	NA	False	NA	34	True	AATAAA	-45	NA	26184059	26186317	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_26184100_26186300
H1_mix_00078049	chr7	+	2128	6	FSM	ENSG00000122565.19	ENST00000337620.8	2128	6	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_1	1612.75027205082	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTAGACTTTTTTCTTTA	-10	True	NA	32	True	AATAAA	-24	NA	26201161	26213356	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_26201562_26202970_26203023_26206367_26206511_26208392_26208556_26211661_26211757_26212081
H1_mix_00078050	chr7	+	2127	6	FSM	ENSG00000122565.19	ENST00000396386.7	2061	6	-93	27	-93	-27	multi-exon	FALSE	canonical	3	3918	junction_4	208.415546445077	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATTAAAATGAGGTTTTA	126	False	NA	5	True	AATAAA	-30	NA	26201651	26213580	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_26201827_26202970_26203023_26206367_26206511_26208392_26208556_26211661_26211757_26212081
H1_mix_00078052	chr7	+	1737	6	FSM	ENSG00000122565.19	ENST00000409747.5	1717	6	-20	0	0	0	multi-exon	FALSE	canonical	3	171	junction_3	1638.31530542811	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTAGACTTTTTTCTTTA	6	True	NA	32	True	AATAAA	-24	NA	26201744	26213356	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_26201827_26202970_26203023_26206367_26206511_26208465_26208556_26211661_26211757_26212081
H1_mix_00078053	chr7	+	2544	6	NIC	ENSG00000122565.19	novel	2061	6	NA	NA	29	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_1	1692.95138737059	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTAGACTTTTTTCTTTA	8	True	NA	32	True	AATAAA	-24	NA	26201793	26213356	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_26202610_26202970_26203023_26206367_26206511_26208392_26208556_26211661_26211757_26212081
H1_mix_00078054	chr7	+	2676	7	FSM	ENSG00000086300.16	ENST00000338523.9	2665	7	-11	0	-11	0	multi-exon	FALSE	canonical	3	130	junction_1	13.3010024684858	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGTTTTTTATTTTTT	-23	True	NA	60	True	AATATA	-19	NA	26291850	26374383	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_26292087_26346419_26346467_26360974_26361062_26364534_26364636_26365046_26365146_26371820_26372034_26372490
H1_mix_00078055	chr7	+	823	7	FSM	ENSG00000086300.16	ENST00000416246.5	823	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	62.1201792227507	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCAGAAAGGTATTTCCT	8	True	NA	54	True	AAAAAG	-18	NA	26291920	26372022	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_26292087_26346419_26346467_26357006_26357128_26360974_26361062_26364534_26364636_26365046_26365146_26371820
H1_mix_00078056	chr7	+	727	2	FSM	ENSG00000214870.10	ENST00000449537.1	727	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATTTAAAAACATTGATTG	-1	True	NA	-73	True	AAAAAG	-21	NA	26398612	26399563	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_26399022_26399245
H1_mix_00078060	chr7	+	4228	17	FSM	ENSG00000106052.14	ENST00000265393.10	2478	17	33	-1783	-14	897	multi-exon	FALSE	canonical	3	1030	junction_8	131.749866579629	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAGTTCTAAAACAAACCT	-28	True	NA	91	True	ATTAAA	-6	NA	27740127	27830664	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_27740270_27748517_27748687_27758030_27758134_27765833_27766022_27769675_27769835_27785162_27785312_27785398_27785490_27787417_27787604_27792005_27792231_27793065_27793213_27794322_27794447_27796115_27796220_27799964_27800091_27816348_27816395_27816889_27817039_27827737_27827821_27828627
H1_mix_00078061	chr7	+	3423	17	FSM	ENSG00000106052.14	ENST00000396319.7	3423	17	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_14	297.887746265267	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATTGTTGTCAAATTTA	6	True	NA	27	True	ATTAAA	-31	NA	27740161	27829767	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_27740270_27748517_27748687_27758030_27758134_27765833_27766022_27769675_27769835_27785162_27785312_27785398_27785490_27787417_27787604_27792005_27792231_27793065_27793213_27794322_27794447_27796115_27796220_27799964_27800091_27816348_27816521_27816889_27817039_27827737_27827821_27828627
H1_mix_00078062	chr7	+	580	7	FSM	ENSG00000106069.24	ENST00000439384.5	578	7	-2	0	-2	0	multi-exon	FALSE	canonical	0	0	junction_2	9.09975579647913	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTGGGTGAGAAGAGGT	1	True	NA	NA	False	NA	NA	NA	29146566	29400590	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_29146746_29146848_29146961_29354624_29354664_29367931_29367988_29393678_29393711_29398372_29398487_29400542
H1_mix_00078063	chr7	+	853	2	FSM	ENSG00000106069.24	ENST00000491856.1	2578	2	1725	0	1725	0	multi-exon	FALSE	canonical	3	24	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTAGGTCAGCCCCCTC	NA	False	NA	NA	False	NA	NA	NA	29398372	29401281	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_29398487_29400542
H1_mix_00078069	chr7	+	1988	1	Genic_Genomic	ENSG00000122574.12	novel	NA	NA	NA	NA	108570	4	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTCGTTTCCTTGTTAA	NA	False	NA	33	True	AATAAA	-21	NA	29915077	29917065	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr7_+_29915100_29917100
H1_mix_00078070	chr7	+	2147	14	FSM	ENSG00000106086.20	ENST00000622102.4	2140	14	-7	0	-7	0	multi-exon	FALSE	canonical	3	29	junction_13	54.3438537267079	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGAGTTTGTGGCCTGT	NA	False	NA	19	True	AATAAA	-16	NA	30028353	30118345	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_30028803_30045084_30045202_30046209_30046366_30047831_30047957_30049223_30049383_30050433_30050475_30052708_30052867_30054708_30054866_30055256_30055343_30060883_30060943_30061896_30062028_30062671_30062743_30074070_30074133_30117969
H1_mix_00078071	chr7	+	7853	14	NIC	ENSG00000106086.20	novel	7774	14	NA	NA	4	0	combination_of_known_junctions	TRUE	canonical	2	15	junction_4	62.4433471046607	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTTCTTAAAGGTTTTT	-37	True	NA	16	True	AATAAA	-16	NA	30028365	30084650	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_30028803_30045084_30045202_30046209_30046366_30047831_30047957_30049190_30049383_30050433_30050475_30052708_30052867_30054708_30054866_30055256_30055343_30060883_30060943_30061896_30062028_30062671_30062743_30074070_30074133_30078589
H1_mix_00078072	chr7	+	2328	14	NIC	ENSG00000106086.20	novel	2140	14	NA	NA	-9	-6	combination_of_known_splicesites	FALSE	canonical	3	4	junction_13	60.7205257595873	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAATACGTATTGTTTCA	-20	True	NA	NA	False	AATAAA	-13	NA	30028382	30090738	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_30028803_30045084_30045202_30046209_30046366_30047831_30047957_30049223_30049383_30050433_30050475_30052708_30052867_30054708_30054866_30055256_30055343_30060883_30060943_30061896_30062028_30062671_30062743_30074070_30074133_30090152
H1_mix_00078073	chr7	+	7774	14	FSM	ENSG00000106086.20	ENST00000449726.6	7774	14	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_13	32.5823490168469	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTTCTTAAAGGTTTTT	9	True	NA	16	True	AATAAA	-16	NA	30028411	30084650	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_30028803_30045084_30045202_30046209_30046366_30047831_30047957_30049223_30049383_30050433_30050475_30052708_30052867_30054708_30054866_30055256_30055343_30060883_30060943_30061896_30062028_30062671_30062743_30074070_30074133_30078589
H1_mix_00078075	chr7	+	2840	13	FSM	ENSG00000106086.20	ENST00000396259.5	2840	13	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_12	59.6831332026804	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAAGTATTTCTGTTTCT	38	True	NA	NA	False	AATAAA	-17	NA	30028440	30130483	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_30028803_30045084_30045202_30046209_30046366_30047831_30047957_30049223_30049383_30050433_30050475_30052708_30052867_30054708_30054866_30055256_30055343_30060883_30060943_30061896_30062028_30062671_30062743_30129265
H1_mix_00078076	chr7	+	5984	3	FSM	ENSG00000180354.16	ENST00000324453.13	5761	3	-222	-1	-222	1	multi-exon	FALSE	canonical	3	43	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGTGTTTGCCTCTTTTT	32	False	NA	23	True	ATTAAA	-17	NA	30134763	30162763	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_30135299_30146176_30146300_30157437
H1_mix_00078077	chr7	+	9354	5	FSM	ENSG00000180233.11_ENSG00000235859.5	ENST00000323037.5	3167	5	0	-6187	0	1135	multi-exon	FALSE	canonical	3	167	junction_1	9.70502447189084	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGATTGTGCCACTGTACT	-17	True	NA	NA	False	NA	NA	NA	30284596	30373876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_30285827_30323641_30323738_30355727_30355834_30362376_30362457_30366034
H1_mix_00078078	chr7	+	3794	6	Fusion	ENSG00000180233.11_ENSG00000235859.5	novel	3167	5	NA	NA	38	271	multi-exon	FALSE	canonical	1	7	junction_5	68.0558594097525	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCACCCCTCCCCCCCCC	21	True	NA	102	True	NA	NA	NA	30284634	30373012	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_+_30285827_30323641_30323738_30355727_30355834_30362376_30362457_30366034_30366296_30370953
H1_mix_00078081	chr7	+	2456	17	FSM	ENSG00000106105.15	ENST00000389266.8	2437	17	-19	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	353.476876674769	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGATCTATTTGCTTGT	-31	True	NA	19	True	ATTAAA	-22	NA	30594858	30634033	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_30595144_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30609584_30609731_30612095_30612246_30615895_30616059_30617113_30617279_30621392_30621501_30622316_30622463_30626233_30626320_30628559_30628670_30631447_30631542_30632246_30632438_30633734
H1_mix_00078082	chr7	+	3234	16	FSM	ENSG00000106105.15	ENST00000675587.1	3217	16	-17	0	0	0	multi-exon	FALSE	canonical	3	1293	junction_4	97.9513257808296	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACAAACTTGTGATCTAT	-1	True	NA	11	True	ATTAAA	-14	NA	30594888	30634025	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_30595144_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30609584_30609731_30612095_30612246_30615895_30616059_30617113_30617279_30621392_30622463_30626233_30626320_30628559_30628670_30631447_30631542_30632246_30632438_30633734
H1_mix_00078084	chr7	+	4189	2	FSM	ENSG00000106105.15	ENST00000496643.2	4189	2	0	0	0	0	multi-exon	FALSE	canonical	3	1680	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACTTGTGATCTATTTGC	2307	False	NA	15	True	ATTAAA	-18	NA	30628543	30634029	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_30632438_30633734
H1_mix_00078088	chr7	+	6605	15	NIC	ENSG00000078549.15	novel	6575	17	NA	NA	-32	-7	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	16.902028618736	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTTCCTGGTGGCTGTA	NA	False	NA	3	True	AATAAA	-9	NA	31052275	31111467	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_31052679_31064830_31064937_31077990_31078099_31081712_31081755_31084140_31084251_31084736_31084835_31085309_31085443_31086383_31086538_31086942_31087004_31087626_31087697_31092643_31092736_31100126_31100211_31103236_31103367_31104867_31104910_31106495
H1_mix_00078096	chr7	+	2646	1	FSM	ENSG00000281332.1	ENST00000628855.1	2646	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGGTGTCTGAGGAGTT	NA	False	NA	NA	False	AATAAA	-18	NA	32760278	32762924	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_32760300_32762900
H1_mix_00078100	chr7	+	3899	21	FSM	ENSG00000122507.21	ENST00000350941.7	3899	21	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_13	31.2569992161756	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAATGCCTCTCAGTACA	-12	True	NA	NA	False	AATAAA	-19	NA	33129539	33606068	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_33130042_33146241_33146365_33152700_33152852_33155637_33155703_33177477_33177592_33257235_33257411_33264289_33264375_33273011_33273196_33273826_33273957_33336440_33336623_33340896_33340974_33344580_33344635_33349067_33349171_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33505462_33505646_33533953_33534177_33604864_33604976_33605194
H1_mix_00078101	chr7	+	2994	21	FSM	ENSG00000122507.21	ENST00000673431.1	2994	21	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	31.2920117601921	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAGCTCTGTCCATGCT	1	True	NA	NA	False	NA	NA	NA	33129552	33534176	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_33130042_33146268_33146365_33152700_33152852_33155637_33155703_33177477_33177592_33257235_33257411_33264289_33264375_33273011_33273196_33273826_33273957_33336440_33336623_33340896_33340974_33344580_33344635_33349067_33349171_33351218_33351324_33352858_33352874_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33505462_33505646_33533953
H1_mix_00078103	chr7	+	3912	23	FSM	ENSG00000122507.21	ENST00000242067.11	3996	23	-248	332	-1	11	multi-exon	TRUE	canonical	3	48	junction_8	25.8982832322949	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGAATGTGATTATTTTA	-12	True	NA	-38	True	NA	NA	NA	33129315	33605737	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_33130042_33146241_33146365_33152700_33152852_33155637_33155703_33177477_33177592_33257235_33257411_33264289_33264375_33273011_33273196_33273826_33273957_33336440_33336623_33340896_33340974_33344580_33344635_33349067_33349171_33351218_33351324_33352858_33352874_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33505462_33505646_33533953_33534177_33604864_33604976_33605194
H1_mix_00078106	chr7	+	2053	10	NIC	ENSG00000122507.21	novel	549	5	NA	NA	8	-31	combination_of_known_splicesites	FALSE	canonical	3	49	junction_1	25.8662275640469	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATTTAAATAAAAATATGC	7341	False	NA	NA	False	AAGAAA	-42	NA	33351934	33606037	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_33352050_33352858_33352874_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33505462_33505646_33533953_33534177_33604864_33604976_33605194
H1_mix_00078115	chr7	+	2468	13	NNC	ENSG00000122545.21	novel	4399	13	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	371.557943739002	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTGTGTGAGGTCTTAA	9	False	NA	15	True	AATAAA	-15	NA	35801064	35905305	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_35801273_35832797_35832901_35863551_35863659_35872665_35872767_35873640_35873776_35879822_35879941_35882483_35882577_35883890_35883988_35885827_35885880_35890667_35890794_35898247_35898384_35903075_35903216_35904253
H1_mix_00078116	chr7	+	2462	13	NNC	ENSG00000122545.21	novel	4399	13	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	371.557943739002	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTGTGTGAGGTCTTAA	9	False	NA	15	True	AATAAA	-15	NA	35801064	35905305	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_35801273_35832803_35832901_35863551_35863659_35872665_35872767_35873640_35873776_35879822_35879941_35882483_35882577_35883890_35883988_35885827_35885880_35890667_35890794_35898247_35898384_35903075_35903216_35904253
H1_mix_00078117	chr7	+	2333	13	ISM	ENSG00000122545.21	ENST00000635175.1	1464	14	30205	-920	-1245	0	3prime_fragment	FALSE	canonical	3	426	junction_1	262.772186926665	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTGTGTGAGGTCTTAA	86	False	NA	15	True	AATAAA	-15	NA	35831423	35905305	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_35831497_35832797_35832901_35863551_35863659_35872665_35872767_35873640_35873776_35879822_35879941_35882483_35882577_35883890_35883988_35885827_35885880_35890667_35890794_35898247_35898384_35903075_35903216_35904253
H1_mix_00078120	chr7	+	4579	24	NIC	ENSG00000011426.11	novel	4661	23	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	65	junction_20	123.391503508127	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTATAAACACTAAATTCT	-12	True	NA	-3	True	ATTAAA	-16	NA	36389820	36453655	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_36390045_36396265_36396420_36399078_36399394_36406180_36406567_36407733_36407957_36410513_36410705_36411058_36411167_36415757_36415885_36419243_36419480_36420168_36420315_36420596_36420745_36421856_36421993_36422632_36422810_36423816_36423944_36424544_36424594_36424685_36424743_36425701_36425741_36426014_36426037_36426915_36427029_36428306_36428361_36439203_36439291_36443754_36443863_36449664_36449838_36452476
H1_mix_00078121	chr7	+	4661	23	FSM	ENSG00000011426.11	ENST00000396068.6	4661	23	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_8	76.0655980493914	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGTTTAGGAAGCACT	-12	True	NA	34	True	AATAAA	-23	NA	36389820	36453791	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_36390045_36396265_36396420_36399078_36399394_36406180_36406567_36407733_36407957_36410513_36410705_36411058_36411167_36415757_36415885_36419243_36419480_36420168_36420315_36420596_36420745_36421856_36421993_36422632_36422810_36423816_36423944_36424544_36424594_36424685_36424743_36425701_36425741_36426014_36426037_36426915_36427029_36439203_36439291_36443754_36443863_36449664_36449838_36452476
H1_mix_00078122	chr7	+	4731	24	FSM	ENSG00000011426.11	ENST00000265748.7	4731	24	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_9	44.6629469244621	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGTTTAGGAAGCACT	-3	True	NA	34	True	AATAAA	-23	NA	36389861	36453791	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_36390045_36396265_36396420_36399078_36399394_36406180_36406567_36407733_36407957_36410513_36410705_36411058_36411167_36415757_36415885_36417079_36417191_36419243_36419480_36420168_36420315_36420596_36420745_36421856_36421993_36422632_36422810_36423816_36423944_36424544_36424594_36424685_36424743_36425701_36425741_36426014_36426037_36426915_36427029_36439203_36439291_36443754_36443863_36449664_36449838_36452476
H1_mix_00078123	chr7	+	4776	25	NIC	ENSG00000011426.11	novel	4731	24	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_21	107.595306589089	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGTTTAGGAAGCACT	6	True	NA	34	True	AATAAA	-23	NA	36389870	36453791	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_36390045_36396265_36396420_36399078_36399394_36406180_36406567_36407733_36407957_36410513_36410705_36411058_36411167_36415757_36415885_36417079_36417191_36419243_36419480_36420168_36420315_36420596_36420745_36421856_36421993_36422632_36422810_36423816_36423944_36424544_36424594_36424685_36424743_36425701_36425741_36426014_36426037_36426915_36427029_36428306_36428361_36439203_36439291_36443754_36443863_36449664_36449838_36452476
H1_mix_00078128	chr7	+	1359	8	FSM	ENSG00000010270.14	ENST00000434197.5	1341	8	-18	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	120.993168975672	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAGTGTAATAAAATC	-4	True	NA	-6	True	NA	NA	NA	38178244	38230379	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_38178421_38207446_38207730_38214356_38214435_38215027_38215106_38217187_38217306_38219564_38219661_38228798_38228872_38229922
H1_mix_00078130	chr7	+	1390	10	FSM	ENSG00000010270.14	ENST00000396013.5	1365	10	-27	2	0	0	multi-exon	FALSE	canonical	3	40	junction_1	141.303455961511	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAGTGTAATAAAATC	-36	True	NA	-6	True	NA	NA	NA	38178323	38230379	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_38178421_38179089_38179146_38207446_38207730_38214356_38214435_38215027_38215106_38217024_38217079_38217187_38217306_38219564_38219661_38228798_38228872_38229922
H1_mix_00078131	chr7	+	903	2	FSM	ENSG00000241127.8	ENST00000474392.1	660	2	-15	-228	-15	228	multi-exon	FALSE	canonical	3	421	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATGAGCATTATGAAATT	-25	True	NA	NA	False	CATAAA	-13	NA	39566369	39571230	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_39566548_39570505
H1_mix_00078132	chr7	+	893	3	FSM	ENSG00000241127.8	ENST00000223273.7	871	3	-22	0	-3	0	multi-exon	FALSE	canonical	3	361	junction_2	30	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTGTCACTGGTAATT	-13	True	NA	12	True	ATTAAA	-17	NA	39566381	39572881	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_39566548_39570505_39570628_39572276
H1_mix_00078133	chr7	+	2713	3	FSM	ENSG00000006451.8	ENST00000468201.1	705	3	-238	-1770	-238	41	multi-exon	FALSE	canonical	3	17	junction_1	487.5	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCAAATGTATCAAATGAG	1314	False	NA	58	True	TTTAAA	-43	NA	39623326	39708161	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_39623826_39696684_39696860_39706122
H1_mix_00078134	chr7	+	2794	5	FSM	ENSG00000006451.8	ENST00000005257.7	2787	5	-7	0	0	0	multi-exon	FALSE	canonical	3	908	junction_3	56.3443652905949	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTGGTGTTACTTGAT	-22	True	NA	17	True	AATAAA	-16	NA	39623564	39708120	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_39623826_39686630_39686782_39690381_39690591_39696684_39696860_39706122
H1_mix_00078135	chr7	+	4857	12	NNC	ENSG00000188185.13	novel	3049	12	NA	NA	6	1642	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	8.87749499326087	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGCCCATGATCAACGTGT	25	True	NA	NA	False	AATGAA	-5	NA	39733462	39794734	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_39734045_39763547_39763672_39767403_39767671_39771004_39771092_39779270_39779386_39780506_39780625_39781234_39781352_39781743_39781886_39782734_39782800_39789353_39789545_39791593_39791652_39791743
H1_mix_00078138	chr7	+	9525	14	FSM	ENSG00000065883.17	ENST00000181839.10	9525	14	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_12	33.1108948980052	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCATTTTTCAGCCTTGTT	22	True	NA	NA	False	AATAAA	-18	NA	39950255	40099580	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_39951853_39987598_39988259_39997493_39997665_39999360_39999501_40001860_40002032_40045835_40046026_40047820_40047878_40062825_40062928_40063022_40063101_40078004_40078122_40078719_40078852_40088125_40088332_40092784_40093238_40094129
H1_mix_00078139	chr7	+	2181	3	ISM	ENSG00000065883.17	ENST00000613626.4	3099	10	357	71468	-301	-105	5prime_fragment	FALSE	canonical	3	137	junction_2	18	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTAATGTATTAATTTCC	354	False	NA	NA	False	AATAAA	-25	NA	39950716	39997878	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_39951853_39987598_39988259_39997493
H1_mix_00078141	chr7	+	1580	15	FSM	ENSG00000175600.16	ENST00000628514.3	1563	15	-17	0	-17	0	multi-exon	FALSE	canonical	0	0	junction_12	14.2599768153917	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTAATGAATCTAGTGCC	-7	True	NA	NA	False	NA	NA	NA	40134987	40860631	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_40135121_40180946_40180999_40181954_40182029_40188494_40188581_40189543_40189595_40194939_40195061_40237634_40237727_40274512_40274657_40316759_40316856_40449286_40449359_40459100_40459199_40496283_40496387_40684055_40684134_40749433_40749498_40860315
H1_mix_00078145	chr7	+	859	3	FSM	ENSG00000106591.4	ENST00000223324.3	859	3	0	0	0	0	multi-exon	FALSE	canonical	3	1064	junction_2	61	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTTTTGGCTTTGGT	8	True	NA	14	True	AATAAA	-24	NA	42932375	42937857	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_42932517_42934954_42935137_42937321
H1_mix_00078156	chr7	+	2156	13	FSM	ENSG00000136279.21	ENST00000494774.5	2117	13	-41	2	0	0	multi-exon	FALSE	canonical	1	104	junction_7	96.9540269062267	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCCAGTTTGGTCTACA	-23	True	NA	23	True	NA	NA	NA	44044675	44061714	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44044821_44050224_44050281_44051829_44051943_44052866_44052942_44056756_44056904_44057781_44057860_44058128_44058281_44058428_44058481_44058901_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
H1_mix_00078157	chr7	+	9869	13	FSM	ENSG00000136279.21	ENST00000448521.6	9869	13	0	0	0	0	multi-exon	FALSE	canonical	1	108	junction_10	75.6855703258921	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTCATGCCTGTAATCC	3	True	NA	NA	False	NA	NA	NA	44044701	44069456	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44044821_44050224_44050281_44051829_44051943_44052866_44052942_44056756_44056904_44057781_44057860_44058128_44058281_44058431_44058481_44058901_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
H1_mix_00078162	chr7	+	6700	5	FSM	ENSG00000106636.9	ENST00000478411.2	6688	5	-12	0	0	0	multi-exon	FALSE	canonical	3	457	junction_3	17.2843860174436	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGATAAAGTTGTCTTGAAA	-22	True	NA	3	True	NA	NA	NA	44200965	44214269	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44201240_44204567_44204651_44206384_44206486_44207387_44207493_44208132
H1_mix_00078164	chr7	+	1085	8	FSM	ENSG00000106636.9	ENST00000677090.1	1085	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	208.564774844945	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGGAGGTCGGAGCCAGC	24	True	NA	68	True	NA	NA	NA	44201011	44212595	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44201240_44204567_44204651_44206384_44206486_44207387_44207493_44208132_44208199_44211022_44211125_44211553_44211605_44212246
H1_mix_00078166	chr7	+	4541	23	FSM	ENSG00000105953.16	ENST00000449767.5	3479	23	-324	-738	-305	0	multi-exon	FALSE	canonical	3	29	junction_4	111.080019180576	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCATGTCTGCTGTGTCTTT	NA	False	NA	8	True	CATAAA	-17	NA	44606266	44709066	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44606654_44624316_44624566_44645326_44645519_44647443_44647535_44666735_44666852_44673786_44673942_44674410_44674558_44675177_44675269_44675969_44676150_44681719_44681849_44693824_44694005_44694423_44694577_44696024_44696128_44696428_44696558_44696913_44697065_44697369_44697498_44697603_44697783_44698191_44698264_44700140_44700270_44701542_44701616_44707224_44707389_44707581_44707737_44707878
H1_mix_00078167	chr7	+	1986	9	FSM	ENSG00000105953.16	ENST00000443864.6	1744	9	-242	0	-226	0	multi-exon	FALSE	canonical	3	341	junction_5	41.8292660705397	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTATGTGTGTGTGTGTG	NA	False	NA	12	True	AATAAA	-24	NA	44606345	44676594	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44606654_44624316_44624566_44645326_44645519_44647656_44647760_44666735_44666852_44673786_44673942_44674410_44674558_44675177_44675269_44675969
H1_mix_00078168	chr7	+	4193	23	FSM	ENSG00000105953.16	ENST00000222673.6	4193	23	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_5	35.2865483699918	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCATGTCTGCTGTGTCTTT	0	True	NA	8	True	CATAAA	-17	NA	44606626	44709066	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44606654_44624316_44624566_44645326_44645519_44647656_44647760_44666735_44666852_44673786_44673942_44674410_44674558_44675177_44675269_44675969_44676150_44681719_44681849_44693824_44694005_44694423_44694577_44696024_44696128_44696428_44696558_44696913_44697065_44697369_44697498_44697603_44697783_44698191_44698264_44700140_44700270_44701542_44701616_44707224_44707389_44707581_44707737_44707878
H1_mix_00078170	chr7	+	5241	19	FSM	ENSG00000122515.16	ENST00000309315.9	5228	19	-13	0	-13	0	multi-exon	FALSE	canonical	3	48	junction_7	31.3900196453161	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTGGAATTCATACCC	-18	True	NA	6	True	TATAAA	-14	NA	44748833	44769881	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44748992_44756187_44756300_44756424_44756540_44756946_44757150_44757377_44757562_44757847_44758109_44759280_44759461_44760150_44760229_44760424_44760594_44761448_44761594_44761694_44761906_44762880_44762987_44763255_44763414_44764418_44764487_44764940_44765010_44765334_44765580_44766163_44766334_44766420_44766664_44767515
H1_mix_00078171	chr7	+	3853	18	NIC	ENSG00000122515.16	novel	3800	18	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_3	35.7262757925721	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCGAGTCCCTCCTTTG	9	True	NA	24	True	ATTAAA	-20	NA	44748860	44768694	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_44748992_44756187_44756300_44756424_44756540_44757042_44757150_44757377_44757562_44757847_44758109_44759280_44759461_44760424_44760594_44761448_44761594_44761694_44761906_44762880_44762987_44763255_44763414_44764418_44764487_44764940_44765010_44765334_44765580_44766163_44766334_44766420_44766664_44767515
H1_mix_00078172	chr7	+	3970	18	NIC	ENSG00000122515.16	novel	5228	19	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_7	22.5617185043275	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGCCTGGCCGAGTCCCT	-18	True	NA	18	True	ATTAAA	-14	NA	44748833	44768688	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_44748992_44756187_44756300_44756424_44756540_44756946_44757150_44757377_44757562_44757847_44758109_44759280_44759461_44760424_44760594_44761448_44761594_44761694_44761906_44762880_44762987_44763255_44763414_44764418_44764487_44764940_44765010_44765334_44765580_44766163_44766334_44766420_44766664_44767515
H1_mix_00078173	chr7	+	6831	21	NNC	ENSG00000122515.16	novel	5228	19	NA	NA	29	1897	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_20	46.9190792748536	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTAAAGCGTCTGTGTTT	39	False	NA	19	True	NA	NA	NA	44748890	44771778	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_44748992_44756187_44756300_44756424_44756540_44756946_44757150_44757377_44757562_44757847_44758109_44759280_44759461_44760150_44760229_44760424_44760594_44761448_44761594_44761694_44761906_44762880_44762987_44763255_44763414_44764418_44764487_44764940_44765010_44765334_44765580_44765966_44766057_44766163_44766334_44766420_44766664_44767515_44769115_44769454
H1_mix_00078174	chr7	+	680	2	FSM	ENSG00000122515.16	ENST00000492001.1	680	2	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGATGCCTGGTGTGGCA	7336	False	NA	NA	False	NA	NA	NA	44756187	44756992	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44756300_44756424
H1_mix_00078179	chr7	+	570	3	FSM	ENSG00000196262.15	ENST00000481437.5	570	3	0	0	0	0	multi-exon	FALSE	canonical	3	16744	junction_2	934.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCTGGACCCAACACAAAT	-1	True	NA	NA	False	NA	NA	NA	44796679	44799816	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44796794_44799246_44799278_44799391
H1_mix_00078180	chr7	+	544	4	FSM	ENSG00000196262.15	ENST00000451562.5	544	4	0	0	0	0	multi-exon	FALSE	canonical	3	16744	junction_2	858.456107724145	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAACGACAAATATAGCCA	-1	True	NA	NA	False	NA	NA	NA	44796679	44800011	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44796794_44799246_44799278_44799391_44799481_44799701
H1_mix_00078181	chr7	+	909	6	FSM	ENSG00000196262.15	ENST00000489459.5	907	6	-1	-1	0	0	multi-exon	FALSE	canonical	3	135	junction_2	8056.84866433521	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCGTTTGAGTTAAGAGT	-1	True	NA	6	True	AATAAA	-17	NA	44796679	44801631	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44796794_44798747_44798905_44799246_44799278_44799391_44799481_44799701_44799875_44801286
H1_mix_00078182	chr7	+	835	6	FSM	ENSG00000196262.15	ENST00000355968.10	818	6	-1	-16	0	0	multi-exon	FALSE	canonical	3	167	junction_2	8048.95907804233	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTTGATGTAGGCTTTA	-1	True	NA	22	True	AATAAA	-33	NA	44796679	44801647	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44796794_44798747_44798815_44799246_44799278_44799391_44799481_44799701_44799875_44801286
H1_mix_00078183	chr7	+	475	2	FSM	ENSG00000196262.15	ENST00000620047.5	446	2	-13	-16	0	0	multi-exon	FALSE	canonical	3	76	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTTGATGTAGGCTTTA	-1	True	NA	22	True	AATAAA	-33	NA	44796679	44801647	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44796794_44801286
H1_mix_00078185	chr7	+	4776	2	FSM	ENSG00000196262.15	ENST00000677521.1	4776	2	0	0	0	0	multi-exon	FALSE	canonical	3	16368	junction_1	0	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGCAAGGTGGAAATAAAC	210	False	NA	-3	True	NA	NA	NA	44796890	44803078	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44799875_44801286
H1_mix_00078186	chr7	+	4378	4	FSM	ENSG00000196262.15	ENST00000678165.1	4378	4	0	0	0	0	multi-exon	FALSE	canonical	3	16368	junction_3	204.926002905114	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTTTTCATTATCCCTA	298	False	NA	22	True	AATAAA	-7	NA	44796978	44803103	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44799278_44799391_44799481_44799701_44799875_44801286
H1_mix_00078188	chr7	+	1526	8	FSM	ENSG00000136280.17	ENST00000544363.5	1620	8	-23	117	-23	0	multi-exon	FALSE	canonical	3	35	junction_4	144.020548420519	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGGCTGGGCCCTTGGACG	414	False	NA	-62	True	NA	NA	NA	45000164	45076352	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_45000364_45038252_45038427_45063917_45064002_45064462_45064647_45072725_45072784_45073459_45073572_45074269_45074409_45075776
H1_mix_00078189	chr7	+	1662	9	NIC	ENSG00000136280.17	novel	1864	10	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	139.139711710927	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGGCTGGGCCCTTGGACG	414	False	NA	-62	True	NA	NA	NA	45000164	45076352	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_45000364_45038252_45038427_45063917_45064002_45064462_45064647_45069825_45069962_45072725_45072784_45073459_45073572_45074269_45074409_45075776
H1_mix_00078190	chr7	+	1742	9	FSM	ENSG00000136280.17	ENST00000541586.5	1719	9	-23	0	-23	0	multi-exon	FALSE	canonical	3	126	junction_1	102.509069720684	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTCTGATCCAGTTGGG	414	False	NA	55	True	AAAAAG	-44	NA	45000164	45076469	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_45000364_45063917_45064002_45064462_45064647_45068442_45068580_45069825_45069962_45072725_45072784_45073459_45073572_45074269_45074409_45075776
H1_mix_00078191	chr7	+	1885	10	FSM	ENSG00000136280.17	ENST00000258781.11	1864	10	-21	0	-8	0	multi-exon	FALSE	canonical	3	269	junction_1	59.150362907583	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGTTGCCAAGCATGT	9	False	NA	39	True	AAAAAG	-28	NA	45000179	45076453	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_45000364_45038252_45038427_45063917_45064002_45064462_45064647_45068442_45068580_45069825_45069962_45072725_45072784_45073459_45073572_45074269_45074409_45075776
H1_mix_00078192	chr7	+	1443	7	NIC	ENSG00000136280.17	novel	1864	10	NA	NA	16	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_2	155.320814946212	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGTTGCCAAGCATGT	13	True	NA	39	True	AAAAAG	-28	NA	45000216	45076453	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_45000364_45038252_45038427_45069825_45069962_45072725_45072784_45073459_45073572_45074269_45074409_45075776
H1_mix_00078199	chr7	+	955	6	FSM	ENSG00000183696.14	ENST00000395560.7	955	6	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	68.6364334737754	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTTGTGTGGACTTT	-1	True	NA	14	True	ATTAAA	-15	NA	48089264	48108419	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_48089419_48090187_48090365_48094762_48094828_48106872_48107083_48107360_48107508_48108217
H1_mix_00078200	chr7	+	1642	9	FSM	ENSG00000183696.14	ENST00000395564.9	1664	9	0	22	0	-19	multi-exon	FALSE	canonical	3	71	junction_5	106.237646340645	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAAAAAATTCCATGCAC	-1	True	NA	NA	False	ACTAAA	-44	NA	48089264	48108714	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_48089419_48090187_48090365_48094762_48094828_48099669_48099788_48101823_48101983_48103296_48103412_48106872_48107083_48107360_48107508_48108217
H1_mix_00078201	chr7	+	926	6	NIC	ENSG00000183696.14	novel	2782	3	NA	NA	132	0	combination_of_known_junctions	FALSE	canonical	3	90	junction_1	85.4063229509385	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCCCCTGTTGTGTGGA	242	False	NA	10	True	ATTAAA	-11	NA	48089507	48108415	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_48089637_48090187_48090365_48094762_48094828_48106872_48107083_48107360_48107508_48108217
H1_mix_00078203	chr7	+	2782	3	FSM	ENSG00000183696.14	ENST00000495446.1	2782	3	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_2	10.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCCCCTGTTGTGTGGA	8074	False	NA	10	True	ATTAAA	-11	NA	48104645	48108415	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_48107083_48107360_48107508_48108217
H1_mix_00078210	chr7	+	357	1	FSM	ENSG00000224971.1	ENST00000438311.1	288	1	36	-105	36	105	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGGTTTTCTCTGTTCTT	121	False	NA	NA	False	NA	NA	NA	55732179	55732536	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_55732200_55732500
H1_mix_00078215	chr7	+	1829	3	NNC	ENSG00000239789.6	novel	1786	3	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	3	147	junction_1	277.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTTTTCTTACATCCT	-25	True	NA	18	True	AATAAA	-15	NA	55951851	55956500	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_55951949_55953178_55953319_55954908
H1_mix_00078216	chr7	+	1792	3	FSM	ENSG00000239789.6	ENST00000285298.9	1786	3	-6	0	-6	0	multi-exon	FALSE	canonical	3	387	junction_1	157.5	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTTTTCTTACATCCT	-6	True	NA	18	True	AATAAA	-15	NA	55951870	55956500	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_55951931_55953178_55953319_55954908
H1_mix_00078218	chr7	+	1886	8	FSM	ENSG00000146729.10	ENST00000446778.5	1882	8	-4	0	-4	0	multi-exon	FALSE	canonical	3	14	junction_2	408.77053090796	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGTTTGGATTTTCTTTT	NA	False	NA	30	True	AATAAA	-21	NA	55964576	56000181	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_55964702_55978125_55978266_55981472_55981568_55983727_55983869_55984846_55984879_55994893_55994989_55997365_55997450_55999007
H1_mix_00078220	chr7	+	4255	7	FSM	ENSG00000146729.10	ENST00000497279.5	4255	7	0	0	0	0	multi-exon	FALSE	canonical	3	786	junction_3	59.3223304404749	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCACGTTTGGATTTTCT	NA	False	NA	27	True	AATAAA	-18	NA	55978906	56000178	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_55981568_55982209_55982281_55983727_55983869_55984846_55984879_55994893_55994989_55997365_55997450_55999007
H1_mix_00078222	chr7	+	2584	14	FSM	ENSG00000146731.11	ENST00000275603.9	2584	14	0	0	0	0	multi-exon	FALSE	canonical	3	2378	junction_7	278.997105030473	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTTCTTGCAATGGT	-13	True	NA	32	True	AATAAA	-18	NA	56051764	56063989	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_56051986_56052421_56052486_56054368_56054504_56055623_56055798_56056310_56056415_56057992_56058104_56058361_56058522_56058619_56058703_56059543_56059641_56060268_56060417_56060806_56060941_56061746_56061850_56062682_56062756_56063012
H1_mix_00078224	chr7	+	745	2	FSM	ENSG00000146731.11	ENST00000466479.1	745	2	0	0	0	0	multi-exon	FALSE	canonical	3	3439	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTAGGAAATGGGAAGAGG	923	False	NA	82	True	NA	NA	NA	56062618	56063620	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_56062756_56063012
H1_mix_00078228	chr7	+	1793	7	FSM	ENSG00000129103.19	ENST00000438133.5	1771	7	-22	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	157.042103342455	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATTTGTGTCTTTGATC	3	True	NA	29	True	AATAAA	-23	NA	56064285	56080669	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_56064379_56068481_56068639_56072996_56073112_56076833_56076890_56078101_56078187_56078363_56078509_56079527
H1_mix_00078235	chr7	+	645	3	FSM	ENSG00000286456.2	ENST00000686440.1	636	3	-9	0	-9	0	multi-exon	FALSE	canonical	3	190	junction_2	22	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGGCTATGTGACTCTCC	-9	True	NA	18	True	AATAAA	-29	NA	64574663	64614834	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_64574849_64599658_64599783_64614498
H1_mix_00078240	chr7	+	5984	4	FSM	ENSG00000196247.13	ENST00000682671.1	6094	4	110	0	110	0	multi-exon	FALSE	canonical	3	9	junction_1	55.6317255609503	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTGGATTATGCGTG	3185	False	NA	4	True	AATAAA	-16	NA	64689464	64711023	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_64690526_64691247_64691375_64691864_64691961_64706323
H1_mix_00078242	chr7	+	2729	5	FSM	ENSG00000197008.10	ENST00000494380.5	842	5	-26	-1861	11	0	multi-exon	FALSE	canonical	2	11	junction_3	24.7626230436115	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTGTCAAAACTCAGCAT	0	True	NA	3	True	AATAAA	-17	NA	64794398	64833664	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_64794572_64814917_64815045_64815575_64815654_64830939_64831077_64831450
H1_mix_00078244	chr7	+	2233	4	FSM	ENSG00000197008.10	ENST00000440598.2	2230	4	-3	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	21.249836600679	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGAAAAATGTGAAAATGAT	-1	True	NA	NA	False	ACTAAA	-29	NA	64794424	64833327	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_64794572_64814917_64815045_64815571_64815654_64831450
H1_mix_00078245	chr7	+	2598	4	FSM	ENSG00000197008.10	ENST00000307355.12	2579	4	-35	16	5	0	multi-exon	FALSE	canonical	3	41	junction_2	15.7550697307953	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTGTCAAAACTCAGCAT	NA	False	NA	3	True	AATAAA	-17	NA	64794392	64833664	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_64794572_64814917_64815045_64815575_64815654_64831450
H1_mix_00078246	chr7	+	5680	2	ISM	ENSG00000197008.10	ENST00000359735.7	2679	4	33223	17	33121	0	3prime_fragment	FALSE	canonical	3	27	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTGTCAAAACTCAGCAT	NA	False	NA	3	True	AATAAA	-17	NA	64827610	64833664	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_64831077_64831450
H1_mix_00078248	chr7	+	1411	4	NIC	ENSG00000198039.12	novel	3757	5	NA	NA	0	10	combination_of_known_junctions	TRUE	canonical	3	17	junction_3	40.9986449640581	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGTGTTTCAATTCTGT	13	True	NA	NA	False	ATTAAA	-23	NA	64903287	64924441	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_64903420_64917580_64917708_64918196_64918293_64923385
H1_mix_00078249	chr7	+	3757	5	FSM	ENSG00000198039.12	ENST00000395375.3	3757	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	26.5377090194312	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGAGTCCTGAATATTT	13	True	NA	14	True	AATAAA	-31	NA	64903287	64930966	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_64903420_64917029_64917119_64917580_64917708_64918196_64918293_64927653
H1_mix_00078255	chr7	+	3116	2	FSM	ENSG00000146757.14	ENST00000431504.1	2947	2	-213	44	-173	0	multi-exon	FALSE	canonical	3	21	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGATTGTGTGTGAACTT	NA	False	NA	28	True	AATAAA	-19	NA	65373625	65401081	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_65374001_65398340
H1_mix_00078263	chr7	+	1987	15	FSM	ENSG00000126522.17	ENST00000380839.9	1974	15	-13	0	0	0	multi-exon	FALSE	canonical	2	33	junction_6	52.7078974061724	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAATGGAAGCGGAG	6	True	NA	-5	True	AATAAA	-11	NA	66075833	66093334	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_66076094_66081802_66081998_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66087333_66087387_66087728_66087792_66088806_66088922_66089090_66089176_66089275_66089336_66089611_66089696_66092005_66092087_66092556_66092664_66092767
H1_mix_00078264	chr7	+	1608	16	FSM	ENSG00000126522.17	ENST00000395332.8	1608	16	0	0	0	0	multi-exon	FALSE	canonical	2	139	junction_13	33.0019528041734	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAAAGTGGGCGCGAGAG	-5	True	NA	-13	True	NA	NA	NA	66075888	66092932	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_66076094_66081802_66081998_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66086743_66086822_66087333_66087387_66087728_66087792_66088806_66088922_66089090_66089176_66089275_66089336_66089611_66089696_66092005_66092087_66092556_66092664_66092767
H1_mix_00078268	chr7	+	2788	6	FSM	ENSG00000241258.7	ENST00000395326.8	2774	6	-14	0	7	0	multi-exon	FALSE	canonical	3	59	junction_2	4.19523539268061	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGATTTTTTTCTTAAA	-7	True	NA	18	True	AATAAA	-24	NA	66114832	66154568	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_66114971_66127703_66127741_66130743_66130843_66134279_66134375_66145442_66145501_66152207
H1_mix_00078274	chr7	+	599	2	FSM	ENSG00000237310.3	ENST00000669732.2	642	2	36	7	-16	0	multi-exon	FALSE	canonical	3	29	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACTCTTCTGGTTTTTGG	NA	False	NA	20	True	ATTAAA	-21	NA	66493642	66495470	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_66494026_66495254
H1_mix_00078277	chr7	+	4876	4	FSM	ENSG00000243335.10	ENST00000639828.2	4869	4	-7	0	-7	0	multi-exon	FALSE	canonical	3	33	junction_3	8.48528137423857	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGTGCTGTGCCTTTCT	-5	True	NA	19	True	ATTAAA	-15	NA	66628873	66643047	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_66629209_66633274_66633445_66638252_66638432_66638855
H1_mix_00078278	chr7	+	885	2	NIC	ENSG00000154710.18	novel	2654	10	NA	NA	-39	-85925	combination_of_known_splicesites	FALSE	canonical	3	41	junction_1	0	954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTCTACTAAAATACAGAAAA	-2	True	NA	NA	False	NA	NA	NA	66682124	66686110	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_66682259_66685359
H1_mix_00078281	chr7	+	553	4	FSM	ENSG00000154710.18	ENST00000442563.5	553	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	6.0184900284226	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGGCAGAAGCAGATTCAG	0	True	NA	NA	False	NA	NA	NA	66740732	66772035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_66740793_66768830_66769026_66770322_66770468_66771882
H1_mix_00078283	chr7	+	3733	9	FSM	ENSG00000154710.18	ENST00000284957.9	3733	9	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_3	22.1468818346963	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTTGGTTCTTTCTTAG	0	True	NA	17	True	AATAAA	-29	NA	66740732	66811464	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_66740793_66771882_66772079_66775226_66775394_66783674_66783842_66795510_66795593_66797373_66797507_66799322_66799415_66805139_66805397_66808885
H1_mix_00078284	chr7	+	4229	7	FSM	ENSG00000106609.16	ENST00000341567.8	4229	7	0	0	0	0	multi-exon	FALSE	canonical	3	442	junction_6	17.1407571465077	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTCCGCGTCTTCTTCC	-15	True	NA	19	True	AATAAA	-14	NA	66921224	66958551	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_66921462_66941847_66942025_66944975_66945262_66948543_66948695_66950951_66951136_66953225_66953370_66955501
H1_mix_00078290	chr7	+	7024	19	FSM	ENSG00000158321.18	ENST00000644939.1	7006	19	-18	0	-18	0	multi-exon	FALSE	canonical	1	7	junction_4	139.706659173011	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTTCCAGCTGCTTGTT	NA	False	NA	13	True	ATTAAA	-11	NA	69598277	70792867	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_69599963_69899285_69899499_70118131_70118234_70134535_70134572_70435751_70435782_70698568_70698621_70762869_70763342_70764754_70765006_70766113_70766335_70768023_70768069_70771548_70771645_70774027_70774100_70775356_70775387_70777102_70777175_70781614_70781757_70784941_70785020_70785954_70786039_70787208_70787432_70789747
H1_mix_00078293	chr7	+	6122	14	NIC	ENSG00000158321.18	novel	4160	14	NA	NA	1	201	combination_of_known_splicesites	FALSE	canonical	3	63	junction_5	87.6317604740826	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGTCGCTTGTGGTTTGT	14	True	NA	14	True	TATAAA	-14	NA	70694058	70793068	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_70695046_70698568_70698621_70762869_70763342_70764754_70765006_70766113_70766356_70771548_70771645_70774027_70774100_70775356_70775387_70777102_70777175_70781614_70781757_70784941_70785020_70785954_70786039_70787208_70787432_70789747
H1_mix_00078294	chr7	+	5922	11	NIC	ENSG00000158321.18	novel	4160	14	NA	NA	1	199	combination_of_known_splicesites	FALSE	canonical	3	11	junction_5	106.938346723708	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACAGTCGCTTGTGGTTT	14	True	NA	12	True	TATAAA	-12	NA	70694058	70793066	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_70695046_70698568_70698621_70762869_70763342_70764754_70765006_70766113_70766356_70777102_70777175_70781614_70781757_70784941_70785020_70785954_70786039_70787208_70787432_70789747
H1_mix_00078295	chr7	+	6019	12	NIC	ENSG00000158321.18	novel	4160	14	NA	NA	3	199	combination_of_known_splicesites	FALSE	canonical	3	32	junction_6	117.280760824204	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACAGTCGCTTGTGGTTT	16	True	NA	12	True	TATAAA	-12	NA	70694060	70793066	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_70695046_70698568_70698621_70762869_70763342_70764751_70765006_70766113_70766356_70771548_70771645_70777102_70777175_70781614_70781757_70784941_70785020_70785954_70786039_70787208_70787432_70789747
H1_mix_00078296	chr7	+	6164	15	NIC	ENSG00000158321.18	novel	4583	14	NA	NA	5	199	combination_of_known_junctions	FALSE	canonical	3	10	junction_5	113.575314398932	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACAGTCGCTTGTGGTTT	18	True	NA	12	True	TATAAA	-12	NA	70694062	70793066	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_70695046_70698568_70698621_70762869_70763342_70764751_70765006_70766113_70766356_70768023_70768069_70771548_70771645_70774027_70774100_70775356_70775387_70777102_70777175_70781614_70781757_70784941_70785020_70785954_70786039_70787208_70787432_70789747
H1_mix_00078297	chr7	+	6104	14	NIC	ENSG00000158321.18	novel	4160	14	NA	NA	1	201	combination_of_known_junctions	FALSE	canonical	3	106	junction_5	83.0323954744463	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGTCGCTTGTGGTTTGT	14	True	NA	14	True	TATAAA	-14	NA	70694058	70793068	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_70695046_70698568_70698621_70762869_70763342_70764751_70765006_70766113_70766335_70771548_70771645_70774027_70774100_70775356_70775387_70777102_70777175_70781614_70781757_70784941_70785020_70785954_70786039_70787208_70787432_70789747
H1_mix_00078298	chr7	+	5071	11	NIC	ENSG00000158321.18	novel	4160	14	NA	NA	19	199	combination_of_known_splicesites	FALSE	canonical	3	21	junction_5	107.299580614278	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACAGTCGCTTGTGGTTT	348	False	NA	12	True	TATAAA	-12	NA	70694891	70793066	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_70695046_70698568_70698621_70762869_70763342_70764751_70765006_70766113_70766335_70777102_70777175_70781614_70781757_70784941_70785020_70785954_70786039_70787208_70787432_70789747
H1_mix_00078299	chr7	+	5303	15	NIC	ENSG00000158321.18	novel	4160	14	NA	NA	27	199	combination_of_known_junctions	FALSE	canonical	3	14	junction_5	111.530813899028	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACAGTCGCTTGTGGTTT	356	False	NA	12	True	TATAAA	-12	NA	70694899	70793066	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_70695046_70698568_70698621_70762869_70763342_70764754_70765006_70766113_70766335_70768023_70768069_70771548_70771645_70774027_70774100_70775356_70775387_70777102_70777175_70781614_70781757_70784941_70785020_70785954_70786039_70787208_70787432_70789747
H1_mix_00078307	chr7	+	1540	4	FSM	ENSG00000225648.6	ENST00000685034.1	1489	4	-34	-17	1	0	multi-exon	FALSE	canonical	3	46	junction_1	24.3903441732356	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTTCCTAACTCCCTTTC	NA	False	NA	NA	False	AATAAA	-42	NA	72829425	72837396	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_72829784_72831601_72831799_72833763_72833929_72836576
H1_mix_00078310	chr7	+	4020	16	NNC	ENSG00000196313.13	novel	6013	15	NA	NA	-21	-2073	at_least_one_novel_splicesite	TRUE	canonical	3	21	junction_1	72.1931360233706	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTAGCCTTTGTCCCCT	NA	False	NA	NA	False	GGGGCT	-38	NA	72879327	72946226	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_72879886_72881493_72881553_72890626_72890754_72890932_72891111_72926261_72926478_72926801_72926964_72928384_72928466_72929939_72930112_72938589_72938682_72939335_72939410_72939846_72939969_72940413_72940517_72940816_72940994_72941836_72943523_72945585_72945709_72946136
H1_mix_00078312	chr7	+	5480	14	ISM	ENSG00000196313.13	ENST00000627934.3	6013	15	11278	-4	11262	4	3prime_fragment	FALSE	canonical	3	114	junction_2	47.2328989747838	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTCTGCATTTTATTTCT	NA	False	NA	NA	False	AATAAA	-23	NA	72890626	72948303	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_72890754_72890932_72891111_72926261_72926478_72926801_72926964_72928384_72928466_72929939_72930112_72938589_72938682_72939335_72939410_72939846_72939969_72940413_72940517_72940816_72940994_72941836_72943523_72945585_72945709_72946136
H1_mix_00078313	chr7	+	5855	13	FSM	ENSG00000196313.13	ENST00000434423.5	5842	13	-13	0	-13	0	multi-exon	FALSE	canonical	3	77	junction_1	49.768561584822	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTACGTTCTGCATTTTAT	-22	True	NA	NA	False	AATAAA	-19	NA	72925081	72948299	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_72925766_72926261_72926478_72926801_72926964_72928384_72928466_72929939_72930112_72938589_72938682_72939335_72939410_72939846_72939969_72940413_72940517_72940816_72940994_72941836_72943523_72945585_72945709_72946136
H1_mix_00078314	chr7	+	702	6	FSM	ENSG00000273897.1	ENST00000380410.6	715	6	13	0	13	0	multi-exon	FALSE	canonical	3	8	junction_2	12.3676998669922	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCACAAATGGTTCCTCT	NA	False	NA	NA	False	NA	NA	NA	73037383	73049246	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_73037526_73039415_73039503_73039678_73039782_73041237_73041422_73044471_73044561_73049149
H1_mix_00078316	chr7	+	4301	23	ISM	ENSG00000233369.7	ENST00000544802.5	3609	24	1	0	1	0	intron_retention	FALSE	canonical	3	1024	junction_21	575.768844586692	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCACACACTAAGTCATTG	-1	True	NA	NA	False	AATAAA	-14	NA	73154938	73207283	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_73155344_73175414_73175526_73176856_73176923_73179086_73179271_73180538_73180598_73182076_73182149_73183114_73183299_73184660_73184720_73190065_73190138_73191370_73191555_73192496_73192556_73192950_73193026_73194625_73194728_73195635_73195702_73195878_73196063_73197963_73198020_73198692_73198774_73199695_73199780_73200448_73200633_73202111_73202141_73203422_73203465_73204562_73204605_73205382
H1_mix_00078322	chr7	+	1238	13	FSM	ENSG00000071462.12	ENST00000423497.5	1219	13	-19	0	0	0	multi-exon	FALSE	canonical	3	25	junction_11	316.623714192239	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCTCTGGCATCTCCCA	14	True	NA	2	True	AATAAA	-12	NA	73683606	73698208	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_73683674_73683766_73683805_73686635_73686732_73686817_73686901_73686998_73687096_73690915_73691013_73692595_73692647_73693328_73693415_73693623_73693670_73693991_73694051_73697465_73697517_73697604_73697695_73697831
H1_mix_00078323	chr7	+	691	6	FSM	ENSG00000071462.12	ENST00000442099.1	691	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	317.967545513689	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCTCTGAGAGCATCTT	1548	False	NA	-54	True	AATGAA	-34	NA	73690915	73698152	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_73691013_73692595_73692647_73693328_73693415_73693623_73693670_73697604_73697695_73697831
H1_mix_00078326	chr7	+	3085	31	NIC	ENSG00000049540.19	novel	3109	32	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	5.081666393353	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGGGGATTATTTTTG	7	True	NA	9	True	AATAAA	-21	NA	74028143	74069677	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_74028270_74035363_74035415_74036554_74036585_74037706_74037740_74041215_74041252_74042613_74042707_74042983_74043035_74043117_74043169_74043878_74043921_74045221_74045294_74046187_74046218_74046695_74046768_74047674_74047717_74048141_74048202_74048502_74048557_74051749_74051840_74051923_74051984_74053162_74053310_74054715_74054770_74056270_74056436_74056671_74056714_74059885_74060048_74060139_74060185_74060375_74060502_74061100_74061140_74063152_74063225_74063309_74063370_74063620_74063696_74065693_74065733_74066731_74066777_74068656
H1_mix_00078329	chr7	+	2737	7	FSM	ENSG00000106682.16	ENST00000265753.13	2563	7	-194	20	-69	0	multi-exon	TRUE	canonical	3	540	junction_4	1327.37946722104	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAACCTTACGTAATA	-5	True	NA	NA	False	AGTAAA	-39	NA	74174161	74197076	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_74174443_74187610_74187799_74189672_74189738_74189821_74189919_74190246_74190307_74194740_74194879_74195168
H1_mix_00078330	chr7	+	2798	5	FSM	ENSG00000106682.16	ENST00000495187.2	2776	5	-22	0	0	0	multi-exon	FALSE	canonical	3	2842	junction_1	376.586311487818	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAACCTTACGTAATA	2	True	NA	NA	False	AGTAAA	-39	NA	74174330	74197076	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_74174443_74187610_74187799_74189672_74189738_74189821_74189919_74194740
H1_mix_00078332	chr7	+	2312	5	FSM	ENSG00000106682.16	ENST00000677570.1	2312	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	1395.73090171422	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTAATGCTTGCCTTTA	7	True	NA	NA	False	AATAAA	-16	NA	74174355	74197093	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_74174443_74189672_74189738_74189821_74189919_74194740_74194879_74195168
H1_mix_00078333	chr7	+	4105	2	FSM	ENSG00000106682.16	ENST00000679161.1	4102	2	-20	17	-20	0	multi-exon	FALSE	canonical	3	3279	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAACCTTACGTAATA	5840	False	NA	NA	False	AGTAAA	-39	NA	74192681	74197076	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_74194879_74195168
H1_mix_00078334	chr7	+	5644	17	FSM	ENSG00000106665.16	ENST00000223398.11	5623	17	-21	0	-21	0	multi-exon	FALSE	canonical	3	21	junction_9	63.6826850486064	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGGCAGTTGGCTTGTCT	NA	False	NA	20	True	AATAAA	-20	NA	74289385	74405935	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_74289735_74317479_74317668_74338447_74339005_74353879_74354005_74356409_74356624_74357279_74357478_74360174_74360279_74364254_74364316_74372931_74373037_74375886_74376823_74380805_74380864_74386520_74386605_74389102_74389260_74397073_74397234_74400369_74400556_74401504_74401568_74403836
H1_mix_00078335	chr7	+	5445	16	FSM	ENSG00000106665.16	ENST00000361545.9	5445	16	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_7	22.4162639369028	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGACCCCGGCAGTTGGCT	37	True	NA	15	True	AATAAA	-15	NA	74289474	74405930	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_74289735_74317479_74317668_74338447_74339005_74353879_74354005_74356409_74356624_74357279_74357478_74360174_74360279_74364254_74364316_74375886_74376823_74380805_74380864_74386520_74386605_74389102_74389260_74397073_74397234_74400369_74400556_74401504_74401568_74403836
H1_mix_00078338	chr7	+	3284	27	FSM	ENSG00000006704.11	ENST00000424337.7	3284	27	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	20.8939276589576	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTTGCCTTTACTTTTA	-11	True	NA	NA	False	AGTAAA	-20	NA	74453905	74602605	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_74454177_74508074_74508204_74512829_74512972_74515440_74515597_74518138_74518323_74519408_74519720_74521207_74521298_74524070_74524155_74529733_74529918_74535112_74535139_74536166_74536276_74538135_74538174_74538679_74538761_74539878_74539969_74544754_74544803_74545743_74545810_74547102_74547287_74555173_74555224_74555437_74555495_74557638_74557723_74558860_74559045_74559626_74559656_74589850_74589929_74590824_74591018_74595013_74595052_74601043_74601181_74602364
H1_mix_00078341	chr7	+	4515	35	FSM	ENSG00000263001.8	ENST00000573035.6	4515	35	0	0	0	0	multi-exon	TRUE	canonical	3	67	junction_9	680.075352022896	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATTGCTCTCTCGGCTGT	-27	True	NA	NA	False	AATAAA	-27	NA	74657717	74760692	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_74658069_74689123_74689228_74690972_74691112_74698960_74699096_74700246_74700431_74700605_74700635_74705163_74705219_74706389_74706434_74711031_74711110_74714856_74714917_74716893_74716951_74718878_74718942_74728785_74728897_74730228_74730295_74732478_74732663_74733922_74733982_74735460_74735533_74736499_74736684_74738044_74738104_74743448_74743521_74744757_74744942_74745882_74745942_74746336_74746412_74748014_74748117_74749024_74749091_74749267_74749452_74751360_74751417_74752089_74752171_74753093_74753178_74753845_74754030_74755508_74755538_74756819_74756862_74757958_74758001_74758779_74758856_74759547
H1_mix_00078342	chr7	+	4415	34	FSM	ENSG00000263001.8	ENST00000614986.4	4415	34	0	0	0	0	multi-exon	FALSE	canonical	3	779	junction_11	528.292003319518	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATTGCTCTCTCGGCTGT	13	True	NA	NA	False	AATAAA	-27	NA	74657757	74760692	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_74658069_74689123_74689228_74690972_74691112_74698960_74699096_74700246_74700431_74700605_74700635_74705163_74705219_74706389_74706434_74711031_74711110_74716893_74716951_74718878_74718942_74728785_74728897_74730228_74730295_74732478_74732663_74733922_74733982_74735460_74735533_74736499_74736684_74738044_74738104_74743448_74743521_74744757_74744942_74745882_74745942_74746336_74746412_74748014_74748117_74749024_74749091_74749267_74749452_74751360_74751417_74752089_74752171_74753093_74753178_74753845_74754030_74755508_74755538_74756819_74756862_74757958_74758001_74758779_74758856_74759547
H1_mix_00078343	chr7	+	4352	33	FSM	ENSG00000263001.8	ENST00000620879.4	4352	33	0	0	0	0	multi-exon	FALSE	canonical	3	915	junction_10	488.042661709443	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATTGCTCTCTCGGCTGT	13	True	NA	NA	False	AATAAA	-27	NA	74657757	74760692	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_74658069_74689123_74689228_74690972_74691112_74698960_74699096_74700246_74700431_74700605_74700635_74705163_74705219_74706389_74706434_74711031_74711110_74716893_74716951_74728785_74728897_74730228_74730295_74732478_74732663_74733922_74733982_74735460_74735533_74736499_74736684_74738044_74738104_74743448_74743521_74744757_74744942_74745882_74745942_74746336_74746412_74748014_74748117_74749024_74749091_74749267_74749452_74751360_74751417_74752089_74752171_74753093_74753178_74753845_74754030_74755508_74755538_74756819_74756862_74757958_74758001_74758779_74758856_74759547
H1_mix_00078344	chr7	+	4412	34	FSM	ENSG00000263001.8	ENST00000621734.4	4412	34	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_9	660.010931539824	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATTGCTCTCTCGGCTGT	13	True	NA	NA	False	AATAAA	-27	NA	74657757	74760692	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_74658069_74689123_74689228_74690972_74691112_74698960_74699096_74700246_74700431_74700605_74700635_74705163_74705219_74706389_74706434_74711031_74711110_74714856_74714917_74716893_74716951_74728785_74728897_74730228_74730295_74732478_74732663_74733922_74733982_74735460_74735533_74736499_74736684_74738044_74738104_74743448_74743521_74744757_74744942_74745882_74745942_74746336_74746412_74748014_74748117_74749024_74749091_74749267_74749452_74751360_74751417_74752089_74752171_74753093_74753178_74753845_74754030_74755508_74755538_74756819_74756862_74757958_74758001_74758779_74758856_74759547
H1_mix_00078345	chr7	+	5078	32	ISM	ENSG00000263001.8	ENST00000620879.4	4352	33	-38	4	2	-2	intron_retention	FALSE	canonical	3	915	junction_10	483.583288675662	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTCATTGCTCTCTCGG	-25	True	NA	NA	False	AATAAA	-23	NA	74657719	74760688	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_74658069_74689123_74689228_74690972_74691112_74698960_74699096_74700246_74700431_74700605_74700635_74705163_74705219_74706389_74706434_74711031_74711110_74716893_74716951_74728785_74728897_74730228_74730295_74732478_74732663_74733922_74733982_74735460_74735533_74736499_74736684_74738044_74738104_74743448_74743521_74744757_74744942_74745882_74745942_74746336_74746412_74748014_74748117_74749024_74749091_74749267_74749452_74751360_74751417_74752089_74752171_74753093_74753178_74753845_74754030_74755508_74755538_74756819_74756862_74757958_74758001_74758779
H1_mix_00078354	chr7	+	506	3	FSM	ENSG00000223705.10	ENST00000473960.1	500	3	-6	0	-6	0	multi-exon	FALSE	canonical	1	2	junction_2	138.5	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTGTTGGAAGTGGGAT	NA	False	NA	NA	False	NA	NA	NA	75410315	75411539	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_75410461_75410605_75410835_75411407
H1_mix_00078356	chr7	+	1553	11	FSM	ENSG00000223705.10	ENST00000421140.6	1535	11	-18	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	130.716640103699	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCAGAGGCTCCAGGCTGA	NA	False	NA	NA	False	NA	NA	NA	75410349	75416597	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_75410461_75410605_75410727_75411407_75411575_75411654_75411760_75412788_75412933_75414884_75415024_75415119_75415235_75415591_75415779_75415980_75416192_75416274_75416416_75416485
H1_mix_00078357	chr7	+	1259	6	FSM	ENSG00000223705.10	ENST00000693166.1	1265	6	0	6	0	0	multi-exon	FALSE	canonical	3	51	junction_3	142.103624162088	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATAGATCACAGTTTTTT	-1	True	NA	16	True	AATAAA	-17	NA	75410361	75416786	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_75410461_75414884_75415024_75415119_75415235_75415595_75415779_75415980_75416192_75416274
H1_mix_00078358	chr7	+	1310	8	NIC	ENSG00000223705.10	novel	1535	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	34	junction_2	147.469125097909	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATAGATCACAGTTTTTT	-1	True	NA	16	True	AATAAA	-17	NA	75410361	75416786	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_75410461_75410605_75410727_75414884_75415024_75415119_75415235_75415595_75415779_75415980_75416192_75416274_75416416_75416485
H1_mix_00078359	chr7	+	1407	7	NIC	ENSG00000223705.10	novel	1535	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	20	junction_1	157.57185309848	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATAGATCACAGTTTTTT	-1	True	NA	16	True	AATAAA	-17	NA	75410361	75416786	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_75410461_75412788_75412933_75414884_75415024_75415119_75415235_75415591_75415779_75415980_75416192_75416274
H1_mix_00078360	chr7	+	1376	7	NIC	ENSG00000223705.10	novel	1195	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	34	junction_2	134.505266315735	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATAGATCACAGTTTTTT	-1	True	NA	16	True	AATAAA	-17	NA	75410361	75416786	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_75410461_75410605_75410727_75414884_75415024_75415119_75415235_75415591_75415771_75415980_75416192_75416274
H1_mix_00078361	chr7	+	1836	8	FSM	ENSG00000223705.10	ENST00000457988.5	1836	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	146.388356847149	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	-1	True	NA	17	True	AATAAA	-18	NA	75410361	75416787	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_75410461_75410605_75410727_75411654_75411760_75412788_75412933_75414884_75415024_75415119_75415235_75415591_75416192_75416274
H1_mix_00078362	chr7	+	2825	9	NIC	ENSG00000223705.10	novel	1535	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	24	junction_4	133.616756060009	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATAGATCACAGTTTTTT	32	False	NA	16	True	AATAAA	-17	NA	75410394	75416786	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_75410461_75410605_75411575_75411654_75411760_75412788_75412933_75414639_75415024_75415119_75415235_75415591_75416192_75416274_75416416_75416485
H1_mix_00078363	chr7	+	1266	6	FSM	ENSG00000223705.10	ENST00000689022.1	1269	6	-4	7	0	0	multi-exon	FALSE	canonical	3	121	junction_4	112.718410208803	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGATAGATCACAGTTTTT	NA	False	NA	15	True	AATAAA	-16	NA	75410349	75416785	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_75410461_75414884_75415024_75415119_75415235_75415591_75415771_75415980_75416192_75416274
H1_mix_00078365	chr7	+	1307	7	NIC	ENSG00000223705.10	novel	1182	7	NA	NA	32	0	intron_retention	FALSE	canonical	3	34	junction_2	148.299247019891	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATAGATCACAGTTTTTT	64	False	NA	16	True	AATAAA	-17	NA	75410426	75416786	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_75410461_75410605_75410727_75414884_75415024_75415119_75415235_75415595_75415771_75415980_75416192_75416274
H1_mix_00078366	chr7	+	2480	9	NIC	ENSG00000223705.10	novel	1535	11	NA	NA	123	0	intron_retention	FALSE	canonical	3	28	junction_6	141.350627872677	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATAGATCACAGTTTTTT	155	False	NA	16	True	AATAAA	-17	NA	75410517	75416786	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_75411575_75411654_75411760_75412788_75412933_75414884_75415024_75415119_75415235_75415591_75415981_75416102_75416192_75416274_75416416_75416485
H1_mix_00078367	chr7	+	3790	4	ISM	ENSG00000223705.10	ENST00000687621.1	1476	5	2109	1	787	0	3prime_fragment	FALSE	canonical	3	333	junction_2	25.7207222984806	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATAGATCACAGTTTTTT	2098	False	NA	16	True	AATAAA	-17	NA	75412460	75416786	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_75415024_75415119_75415235_75415591_75416192_75416274
H1_mix_00078369	chr7	+	1721	4	FSM	ENSG00000005486.17	ENST00000006777.11	1721	4	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_1	33.0689515339624	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCTGGCGTGTGCTTCCT	-17	True	NA	16	True	TATAAA	-20	NA	75879033	75888926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_75879261_75881828_75882237_75883697_75883849_75887991
H1_mix_00078370	chr7	+	2483	16	FSM	ENSG00000127948.16	ENST00000461988.6	2446	16	-37	0	-31	0	multi-exon	FALSE	canonical	3	221	junction_1	45.6657420830977	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTGGTATTGTGTGAG	-2	True	NA	26	True	AATAAA	-16	NA	75915117	75986855	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_75915180_75953988_75954181_75972412_75972462_75979450_75979580_75980338_75980489_75981047_75981173_75981516_75981607_75982223_75982323_75983519_75983637_75983737_75983857_75984776_75984959_75985057_75985208_75985578_75985850_75985922_75986069_75986158_75986242_75986336
H1_mix_00078374	chr7	+	2020	8	FSM	ENSG00000146701.12	ENST00000443006.5	2020	8	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	844.052421236927	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTTGTCCTCTCTTGCA	-4	True	NA	16	True	AATAAA	-21	NA	76048084	76067506	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_76048227_76057409_76057494_76057968_76058079_76060372_76060499_76063514_76063593_76064338_76064439_76064801_76064954_76066278
H1_mix_00078375	chr7	+	2191	9	FSM	ENSG00000146701.12	ENST00000315758.10	2170	9	-21	0	0	0	multi-exon	FALSE	canonical	3	2397	junction_4	107.789653376379	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTCCTCTCTTGCATA	-4	True	NA	18	True	AATAAA	-23	NA	76048084	76067508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_76048227_76054829_76054999_76057409_76057494_76057968_76058079_76060372_76060499_76063514_76063593_76064338_76064439_76064801_76064954_76066278
H1_mix_00078377	chr7	+	1548	8	FSM	ENSG00000146701.12	ENST00000432020.2	1548	8	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_4	904.320423617331	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCCAGCCGCTGTGTCA	4	True	NA	NA	False	NA	NA	NA	76048160	76067067	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_76048227_76054829_76054999_76057409_76057494_76057968_76058079_76063514_76063593_76064338_76064439_76064801_76064954_76066278
H1_mix_00078378	chr7	+	3217	11	NNC	ENSG00000177679.16	novel	3617	15	NA	NA	-4791	0	at_least_one_novel_splicesite	TRUE	canonical	2	9	junction_6	21.4	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTAGGTGGTGAGACCAGG	NA	False	NA	21	True	AATAAA	-17	NA	76260615	76287287	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_76260904_76261351_76261415_76261545_76261582_76264764_76264816_76265363_76265469_76267257_76267436_76281440_76281803_76282647_76282873_76282963_76283102_76283523_76283622_76285614
H1_mix_00078379	chr7	+	3282	5	NIC	ENSG00000177679.16	novel	2150	4	NA	NA	-1977	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	17.5695048308141	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGGTGGTGAGACCAGGC	7	True	NA	22	True	AATAAA	-18	NA	76280636	76287288	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_76281803_76282647_76282873_76282963_76283102_76283523_76283603_76285614
H1_mix_00078380	chr7	+	2164	4	FSM	ENSG00000177679.16	ENST00000612155.1	2150	4	-14	0	-14	0	multi-exon	FALSE	canonical	3	33	junction_3	15.4344492037203	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGGTGGTGAGACCAGGC	-21	True	NA	22	True	AATAAA	-18	NA	76282599	76287288	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_76282873_76282963_76283102_76283523_76283603_76285614
H1_mix_00078381	chr7	+	1765	2	FSM	ENSG00000106211.10	ENST00000447574.1	1455	2	-310	0	-295	0	multi-exon	FALSE	canonical	3	2675	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTTCTCAAATAAAGTTC	7400	False	NA	8	True	NA	NA	NA	76302377	76304260	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_76303866_76303983
H1_mix_00078384	chr7	+	2362	9	NIC	ENSG00000091073.20	novel	2472	10	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	45.5679437762996	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGCCAGCAGGTCCTGAG	NA	False	NA	12	True	AATAAA	-12	NA	76461677	76505987	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_76461837_76480420_76480778_76482507_76483148_76492152_76492254_76500440_76500521_76502297_76502457_76503425_76503588_76504355_76504446_76505373
H1_mix_00078385	chr7	+	550	3	FSM	ENSG00000091073.20	ENST00000438930.5	540	3	-11	1	0	-1	multi-exon	FALSE	canonical	2	5	junction_1	5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGACGCTGTCTGCCTCT	0	True	NA	NA	False	NA	NA	NA	76461708	76480777	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_76461837_76477113_76477179_76480420
H1_mix_00078387	chr7	+	2641	11	FSM	ENSG00000091073.20	ENST00000430490.7	2641	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	67.6493902411544	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCAGGTCCTGAGTGTG	0	True	NA	16	True	AATAAA	-16	NA	76461708	76505991	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_76461837_76463544_76463710_76480420_76480778_76482507_76483148_76492152_76492254_76497336_76497478_76500440_76500521_76502297_76502457_76503425_76503588_76504355_76504446_76505373
H1_mix_00078388	chr7	+	2479	10	FSM	ENSG00000091073.20	ENST00000413936.6	2472	10	-7	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	75.4955644188026	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGTCCTGAGTGTGTGC	0	True	NA	19	True	AATAAA	-19	NA	76461708	76505994	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_76461837_76480420_76480778_76482507_76483148_76492152_76492254_76497336_76497478_76500440_76500521_76502297_76502457_76503425_76503588_76504355_76504446_76505373
H1_mix_00078389	chr7	+	2498	10	NIC	ENSG00000091073.20	novel	2641	11	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	98	junction_2	32.9919556225827	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCAGGTCCTGAGTGTG	2	False	NA	16	True	AATAAA	-16	NA	76461710	76505991	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_76461837_76463544_76463710_76480420_76480778_76482507_76483148_76492152_76492254_76500440_76500521_76502297_76502457_76503425_76503588_76504355_76504446_76505373
H1_mix_00078394	chr7	+	1296	4	FSM	ENSG00000243566.7	ENST00000257632.9	1296	4	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	13.9602610609146	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCCAGTCCCCACCTCCA	3	True	NA	NA	False	NA	NA	NA	76510524	76515456	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_76511053_76511656_76511883_76513946_76514077_76515044
H1_mix_00078395	chr7	+	1184	6	FSM	ENSG00000243566.7	ENST00000334348.8	2250	6	0	1066	0	0	multi-exon	FALSE	canonical	3	32	junction_3	30.3802567467755	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCCAGTCCCCACCTCCA	2	True	NA	NA	False	NA	NA	NA	76510551	76515456	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_76510738_76510902_76511053_76511656_76511883_76513083_76513164_76513946_76514077_76515044
H1_mix_00078403	chr7	+	4249	10	ISM	ENSG00000127947.16	ENST00000435495.6	2526	17	67354	-449	-1505	0	3prime_fragment	FALSE	canonical	3	158	junction_2	31.9795459321219	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTACTTGTTGCCTTGGCTT	1188	False	NA	19	True	ATTAAA	-23	NA	77605422	77640069	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_77607302_77610764_77610843_77610947_77611047_77618479_77618566_77626704_77627676_77632347_77632426_77635781_77635850_77637017_77637049_77638623_77638732_77639218
H1_mix_00078404	chr7	+	1627	3	FSM	ENSG00000127947.16	ENST00000520947.1	664	3	-384	-579	-384	0	multi-exon	FALSE	canonical	3	210	junction_1	24	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTACTTGTTGCCTTGGCTT	NA	False	NA	19	True	ATTAAA	-23	NA	77636380	77640069	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_77637049_77638623_77638732_77639218
H1_mix_00078409	chr7	+	1071	5	FSM	ENSG00000234456.10	ENST00000414797.6	1082	5	0	11	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.08972473588517	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTCAGTGTGAGTGTGA	-24	True	NA	24	True	AATAAA	-18	NA	79453949	79471197	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_79454245_79454885_79455008_79458846_79459000_79470593_79470680_79470782
H1_mix_00078415	chr7	+	3715	18	FSM	ENSG00000135164.19	ENST00000331242.12	3702	18	-13	0	0	0	multi-exon	TRUE	canonical	3	149	junction_9	32.889770814365	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCAAGATTTGTTTTTAC	0	True	NA	8	True	AATAAA	-17	NA	87152439	87196325	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_87152556_87163494_87163618_87164933_87165051_87166482_87166606_87170994_87171090_87173534_87173650_87174592_87174670_87179544_87179703_87181308_87181342_87182227_87182338_87184396_87184626_87185828_87185981_87188091_87188302_87190944_87191028_87193197_87193354_87193724_87194103_87194683_87194829_87195030
H1_mix_00078424	chr7	+	2600	11	NIC	ENSG00000006634.8	novel	3655	12	NA	NA	22	-2	combination_of_known_splicesites	FALSE	canonical	3	51	junction_7	141.973553875361	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTATATATATGTTCGTAA	23	False	NA	3	True	AATAAA	-22	NA	87876237	87908371	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_87876779_87878052_87878226_87884978_87885159_87886843_87886895_87887328_87887399_87887982_87888060_87896473_87896511_87897296_87897340_87900220_87900350_87900763_87900879_87907187
H1_mix_00078425	chr7	+	2394	11	NIC	ENSG00000006634.8	novel	3655	12	NA	NA	-35	0	combination_of_known_splicesites	FALSE	canonical	3	72	junction_10	119.193288401655	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATGTTCGTAATTGTT	-5	True	NA	8	True	AATAAA	-27	NA	87876451	87908376	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_87876779_87878052_87878226_87884978_87885159_87886843_87886895_87887328_87887399_87887982_87888060_87896473_87896511_87897293_87897340_87900220_87900350_87900763_87900879_87907187
H1_mix_00078426	chr7	+	3655	12	FSM	ENSG00000006634.8	ENST00000265728.6	3655	12	-6	6	0	-6	multi-exon	FALSE	canonical	3	186	junction_7	74.1449328975363	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAAACCCTGTTTCCATTG	-21	True	NA	NA	False	AATAAA	-22	NA	87876486	87909547	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_87876779_87878052_87878226_87884978_87885159_87886843_87886895_87887328_87887399_87887982_87888060_87896473_87896511_87897293_87897340_87900220_87900350_87900763_87900879_87904291_87904417_87907187
H1_mix_00078427	chr7	+	2474	12	NIC	ENSG00000006634.8	novel	3655	12	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	51	junction_7	107.414544161955	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATATATATGTTCGTAAT	-18	True	NA	4	True	AATAAA	-23	NA	87876489	87908372	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_87876779_87878052_87878226_87884978_87885159_87886843_87886895_87887328_87887399_87887982_87888060_87896473_87896511_87897296_87897340_87900220_87900350_87900763_87900879_87904291_87904417_87907187
H1_mix_00078428	chr7	+	2342	12	FSM	ENSG00000006634.8	ENST00000431138.5	2342	12	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	117.679702568855	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATATATGTTCGTAATT	26	True	NA	5	True	AATAAA	-24	NA	87876533	87908373	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_87876779_87878052_87878134_87884978_87885159_87886843_87886895_87887328_87887399_87887982_87888060_87896473_87896511_87897293_87897340_87900220_87900350_87900763_87900879_87904291_87904417_87907187
H1_mix_00078430	chr7	+	968	7	FSM	ENSG00000008277.15	ENST00000412441.5	726	7	0	-242	0	242	multi-exon	FALSE	canonical	3	11	junction_2	17.7427606520393	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATGTTGGGGACTGTCT	44	False	NA	NA	False	AGTAAA	-45	NA	87934328	88114890	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_87934551_87935025_87935187_87964633_87964685_87978335_87978413_88075625_88075693_88108175_88108259_88114583
H1_mix_00078433	chr7	+	1284	5	FSM	ENSG00000164647.9	ENST00000297205.7	1219	5	-65	0	-52	0	multi-exon	FALSE	canonical	3	63	junction_2	8.25757228245687	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGATGTTTCTCTTTGTA	217	False	NA	7	True	AATAAA	-16	NA	90154403	90164827	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_90154544_90159757_90159873_90160804_90161318_90161913_90162079_90164476
H1_mix_00078435	chr7	+	2460	6	FSM	ENSG00000157214.14	ENST00000394626.5	2456	6	-4	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	16.7523132730975	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATGGAGGCCTTCTAAT	-6	True	NA	82	True	ATTAAA	-15	NA	90211739	90237678	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_90212046_90225049_90225575_90226970_90227499_90229871_90230037_90232336_90232485_90236890
H1_mix_00078439	chr7	+	3862	23	FSM	ENSG00000105792.19	ENST00000389297.8	3902	23	40	0	-1	0	multi-exon	FALSE	canonical	3	5	junction_5	5.17323851124369	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTACTTCTCTTCTTTAAT	-1	True	NA	12	True	TATAAA	-20	NA	90245213	90311063	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_90245545_90255422_90255483_90258097_90258164_90261946_90262057_90265300_90265378_90268285_90268385_90271525_90271676_90271780_90271959_90273986_90274111_90277072_90277122_90277212_90277335_90279676_90279894_90282891_90283057_90286280_90286400_90288233_90288353_90297748_90297831_90299866_90300060_90303968_90304107_90304743_90304821_90306900_90307099_90307767_90307855_90309262_90309368_90310067
H1_mix_00078440	chr7	+	416	3	FSM	ENSG00000105792.19	ENST00000491886.1	439	3	-16	39	0	-39	multi-exon	FALSE	canonical	3	17	junction_2	3.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAAAGTTTTGTTCAGGT	NA	False	NA	NA	False	NA	NA	NA	90279772	90286410	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_90279894_90282891_90283057_90286280
H1_mix_00078441	chr7	+	7489	10	FSM	ENSG00000105793.16	ENST00000222511.11	7489	10	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_4	25.9277248053169	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCCTCTCGAAATATCTT	12	True	NA	20	True	AATAAA	-17	NA	90346715	90391453	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_90346775_90352815_90353010_90354457_90354550_90355085_90355231_90372154_90372229_90374301_90374355_90377506_90377615_90378133_90378212_90382955_90383080_90384891
H1_mix_00078442	chr7	+	1741	8	FSM	ENSG00000105793.16	ENST00000257659.12	1740	8	-1	0	-1	0	multi-exon	TRUE	canonical	3	5	junction_2	47.4363160630403	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACTAAAAATATAAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	90346663	90385890	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_90346775_90352815_90353010_90372154_90372229_90374301_90374355_90377506_90377615_90378133_90378212_90382955_90383080_90384891
H1_mix_00078445	chr7	+	3558	4	FSM	ENSG00000157224.16	ENST00000496677.6	3533	4	-22	-3	1	3	multi-exon	FALSE	canonical	3	13	junction_2	183.376358587711	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTCTGTTTTTTTCCT	-12	True	NA	41	True	ATTAAA	-20	NA	90403438	90415957	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_90403550_90405518_90405609_90412006_90412050_90412643
H1_mix_00078446	chr7	+	3521	3	FSM	ENSG00000157224.16	ENST00000394605.2	3488	3	-33	0	-4	0	multi-exon	FALSE	canonical	3	84	junction_2	159	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCTGCTTCTGTTTTTTT	-17	True	NA	38	True	ATTAAA	-17	NA	90403433	90415954	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_90403550_90405518_90405613_90412643
H1_mix_00078449	chr7	+	5178	15	FSM	ENSG00000058091.17	ENST00000380050.8	5171	15	-7	0	-7	0	multi-exon	FALSE	canonical	3	103	junction_13	17.430474135015	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTCTAGGTACATCTTC	9	True	NA	22	True	AATAAA	-20	NA	90596313	91210590	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_90596719_90604217_90604250_90726566_90726813_90747680_90747776_90790572_90790653_90863174_90863270_90899290_90899354_90917600_90917725_90955696_90955818_90984147_90984242_91045896_91045961_91079431_91079481_91112541_91112682_91118064_91118209_91207164
H1_mix_00078450	chr7	+	2439	6	NNC	ENSG00000058091.17	novel	5171	15	NA	NA	14	14097	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	61.7102908759957	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGAATTCCTGGCTGT	-14	True	NA	60	True	GATAAA	-20	NA	90596334	90804725	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_90596719_90604217_90604250_90726566_90726813_90747680_90747776_90790572_90790653_90803123
H1_mix_00078455	chr7	+	12498	50	FSM	ENSG00000127914.19	ENST00000356239.8	12476	50	-22	0	0	0	multi-exon	TRUE	canonical	2	3	junction_18	20.9606044468071	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATTTGAACCTTCTTCA	-2	True	NA	23	True	AATAAA	-25	NA	91940839	92110673	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_91941148_91973710_91973969_91980288_91980334_91992157_91992212_91992884_91993056_91994620_91994777_91995602_91995801_92000847_92003236_92012428_92012643_92014248_92014329_92016128_92016268_92017016_92017103_92022237_92022353_92022813_92023010_92029894_92029992_92031511_92031605_92038418_92038773_92040673_92040899_92042045_92042187_92042667_92042772_92045007_92045214_92052725_92052959_92061259_92061423_92062273_92062487_92065230_92065464_92066426_92066547_92070029_92070207_92070904_92071010_92076854_92077008_92077695_92077876_92079078_92080153_92082521_92082663_92083169_92083656_92084639_92084704_92084818_92084941_92085494_92085687_92086227_92086417_92089384_92089530_92093096_92093317_92095022_92095174_92096688_92097358_92097585_92097795_92098108_92098215_92099686_92099870_92100855_92101057_92102593_92102827_92105677_92105764_92107292_92107423_92108493_92108634_92110121
H1_mix_00078457	chr7	+	3983	12	FSM	ENSG00000127914.19	ENST00000487258.5	3983	12	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	13.4059318312627	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACACTGTATTTGAACCTT	NA	False	NA	18	True	AATAAA	-20	NA	92091988	92110668	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_92093317_92095022_92095174_92096688_92097358_92097585_92097795_92098108_92098215_92099686_92099870_92100855_92101057_92102593_92102827_92105677_92105764_92107292_92107423_92108493_92108634_92110121
H1_mix_00078459	chr7	+	6492	20	NNC	ENSG00000001629.10	novel	6340	20	NA	NA	519	689	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_17	19.1500851635927	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATAGTATATCTCTGAA	168	False	NA	28	True	ATTAAA	-39	NA	92246492	92402072	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_92246520_92294888_92295167_92307358_92307657_92319329_92319513_92327782_92327901_92343023_92343233_92344977_92345067_92350949_92351095_92352475_92352643_92362184_92362274_92371476_92371608_92386508_92386644_92387797_92387885_92387974_92388042_92389970_92390117_92391165_92391345_92392240_92392293_92396382_92396477_92397722_92397860_92398211
H1_mix_00078471	chr7	+	5271	1	Intergenic	novelGene_1382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	NA	False	NA	6	True	AATAAA	-16	NA	93640239	93645510	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_93640200_93645500
H1_mix_00078475	chr7	+	5072	52	FSM	ENSG00000164692.19	ENST00000297268.11	5072	52	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	98.262569106984	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATTGAGTAAAATTCCTT	0	True	NA	32	True	AATAAA	-45	NA	94394894	94431227	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_94395102_94397747_94397759_94398381_94398397_94399048_94399085_94400195_94400289_94401566_94401621_94404555_94404601_94404692_94404747_94404838_94404893_94405198_94405253_94405672_94405727_94406249_94406304_94407846_94407892_94408182_94408237_94408335_94408381_94408769_94408824_94409321_94409421_94409563_94409609_94409722_94409822_94410241_94410296_94410419_94410528_94410888_94410943_94411055_94411155_94412067_94412122_94412583_94412683_94413082_94413137_94413689_94413744_94413893_94413948_94414221_94414276_94415225_94415271_94416404_94416504_94417723_94417832_94418498_94418553_94419497_94419552_94420232_94420287_94420390_94420445_94420540_94420649_94421008_94421063_94421898_94421953_94422956_94423119_94424335_94424444_94425116_94425225_94425609_94425664_94425749_94425858_94425997_94426052_94426422_94426531_94427007_94427062_94427187_94427296_94427626_94427886_94428292_94428478_94429187_94429431_94430246
H1_mix_00078476	chr7	+	301	5	FSM	ENSG00000164692.19	ENST00000488298.5	594	5	0	293	0	-293	multi-exon	FALSE	canonical	3	395	junction_1	14.2894191624432	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTATATTGCTGGTTTGG	614	False	NA	NA	False	NA	NA	NA	94413708	94416517	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_94413744_94413893_94413948_94414221_94414276_94415225_94415271_94416404
H1_mix_00078488	chr7	+	1316	7	FSM	ENSG00000006128.12	ENST00000319273.10	1061	7	-262	7	-260	0	multi-exon	FALSE	canonical	3	20	junction_3	5.3748384988657	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGAAGATTTTTGTCACA	NA	False	NA	7	True	AATAAA	-11	NA	97731823	97740465	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_97732196_97732603_97732736_97733722_97733820_97734247_97734293_97734825_97734850_97736298_97736353_97739873
H1_mix_00078489	chr7	+	1011	6	FSM	ENSG00000006128.12	ENST00000346867.4	1011	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	11.5861986863682	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGAAGATTTTTGTCACA	-1	True	NA	7	True	AATAAA	-11	NA	97732083	97740465	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_97732196_97732603_97732736_97733722_97733820_97734825_97734850_97736298_97736353_97739873
H1_mix_00078493	chr7	+	841	3	FSM	ENSG00000164713.10	ENST00000297290.4	790	3	-72	21	-53	0	multi-exon	TRUE	canonical	3	142	junction_1	23	242	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACCTGGTGCTGCTTAC	-2	True	NA	17	True	AATAAA	-17	NA	98281613	98291524	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_98281938_98282350_98282454_98291110
H1_mix_00078495	chr7	+	12617	71	NIC	ENSG00000196367.14	novel	12675	73	NA	NA	-15	0	combination_of_known_junctions	TRUE	canonical	1	1	junction_13	41.1380850407056	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTCCCTTGTTTATGTT	20	True	NA	NA	False	AATAAA	-18	NA	98878516	99013243	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_98878638_98881089_98881251_98881974_98882025_98890334_98890446_98892423_98892529_98893797_98893882_98895763_98895821_98897740_98897867_98899421_98899500_98899678_98899768_98900623_98900721_98903378_98903518_98906176_98906256_98908727_98908963_98910055_98910420_98910509_98910608_98911076_98911272_98912021_98912214_98915722_98915889_98917422_98917680_98921752_98921954_98925111_98925264_98927166_98927367_98929988_98930207_98930632_98930831_98931404_98931666_98933240_98933403_98935578_98935676_98937155_98937278_98937649_98937821_98942948_98943018_98948220_98948341_98948565_98948686_98949416_98949582_98949659_98949842_98950063_98950263_98950875_98951005_98953166_98953434_98955097_98955305_98956145_98956305_98956398_98956534_98957980_98958092_98959343_98959491_98961260_98961475_98962301_98962428_98964628_98964776_98965695_98965896_98967040_98967163_98967484_98967699_98970111_98970292_98971798_98971946_98976148_98976269_98976482_98976771_98976938_98977077_98978210_98978324_98978768_98978905_98981768_98981961_98983263_98983460_98984092_98984359_98984943_98985045_98988764_98988967_98990454_98990620_98992136_98992228_98993537_98993738_98994586_98994849_99004189_99004416_99005130_99005349_99008376_99008562_99011051_99011256_99011340_99011536_99012070
H1_mix_00078500	chr7	+	2009	11	FSM	ENSG00000130429.15	ENST00000645391.1	1669	11	-429	89	-3	0	multi-exon	FALSE	canonical	3	16	junction_1	288.976210093495	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCCCAAAGCACTATGCT	-23	True	NA	NA	False	NA	NA	NA	99374245	99394712	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_99374782_99377337_99377456_99385701_99385779_99386684_99386790_99388038_99388262_99389904_99390013_99390892_99391100_99391177_99391254_99392670_99392877_99394028_99394120_99394450
H1_mix_00078501	chr7	+	1654	11	FSM	ENSG00000130429.15	ENST00000427217.6	1578	11	-55	-21	0	6	multi-exon	FALSE	canonical	3	13	junction_2	290.958158503933	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGGAAGGAGAGGTTTT	360	False	NA	NA	False	AAAAAG	-21	NA	99374674	99394822	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_99374782_99377357_99377440_99385701_99385779_99386684_99386790_99388038_99388262_99389904_99390013_99390892_99391100_99391177_99391254_99392670_99392877_99394028_99394120_99394450
H1_mix_00078502	chr7	+	1512	10	FSM	ENSG00000130429.15	ENST00000646101.2	1511	10	-1	0	0	0	multi-exon	FALSE	canonical	3	678	junction_1	41.8678107888019	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCCTATGTGGAAGGAGA	-1	True	NA	NA	False	AAAAAG	-15	NA	99374728	99394816	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_99374782_99385701_99385779_99386684_99386790_99388038_99388262_99389904_99390013_99390892_99391100_99391177_99391254_99392670_99392877_99394028_99394120_99394450
H1_mix_00078504	chr7	+	1051	3	FSM	ENSG00000130429.15	ENST00000491294.1	1051	3	0	0	0	0	multi-exon	FALSE	canonical	3	707	junction_1	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTAATTATGGACATGC	3000	False	NA	NA	False	AATAAA	-31	NA	99391177	99394797	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_99391254_99392670_99392877_99394028
H1_mix_00078506	chr7	+	1052	6	FSM	ENSG00000106245.11	ENST00000222969.10	1052	6	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_1	296.229370589751	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCACGTCTCTTCTTTCA	16	True	NA	17	True	AATAAA	-18	NA	99408968	99419616	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_99409246_99410033_99410170_99411063_99411187_99416137_99416261_99417428_99417596_99419390
H1_mix_00078509	chr7	+	1738	8	FSM	ENSG00000160917.15	ENST00000436336.6	1738	8	0	0	0	0	multi-exon	FALSE	canonical	3	423	junction_6	182.726962589386	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATGAAATGGATTAAAGC	-29	True	NA	-4	True	NA	NA	NA	99438921	99457342	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_99439186_99444788_99444840_99448120_99448274_99450275_99450372_99450701_99450796_99452367_99452441_99454040_99454137_99456431
H1_mix_00078511	chr7	+	1733	8	NIC	ENSG00000160917.15	novel	1823	8	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	127	junction_6	284.885798816556	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCATGTCTCATTAATTA	2	True	NA	25	True	ATTAAA	-12	NA	99438952	99457371	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_99439186_99444788_99444840_99448120_99448274_99450275_99450372_99450701_99450796_99452367_99452441_99454043_99454137_99456431
H1_mix_00078522	chr7	+	4094	5	NIC	ENSG00000196652.12	novel	4344	7	NA	NA	27	-4	combination_of_known_splicesites	FALSE	canonical	3	39	junction_1	29.2831009286926	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACATGGTTCTGAATCCC	-7	True	NA	6	True	AATAAA	-12	NA	99504976	99533818	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_99505161_99506004_99506459_99512452_99512592_99525812_99526419_99531107
H1_mix_00078524	chr7	+	5324	5	FSM	ENSG00000196652.12	ENST00000454175.1	5626	5	0	302	0	-302	multi-exon	FALSE	canonical	3	30	junction_3	31.1608729017658	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGCGGTGGCTCATGCCTA	-3	True	NA	NA	False	TTTAAA	-17	NA	99505253	99534398	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_99506459_99512452_99512592_99519826_99519910_99525812_99526419_99531107
H1_mix_00078525	chr7	+	4648	4	NIC	ENSG00000196652.12	novel	4344	7	NA	NA	17	0	combination_of_known_splicesites	FALSE	canonical	3	57	junction_2	26.2339898266013	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTCTGAATCCCTGTC	14	True	NA	10	True	AATAAA	-16	NA	99505270	99533822	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_99506459_99512452_99512592_99525812_99526419_99531107
H1_mix_00078526	chr7	+	1386	3	FSM	ENSG00000197343.11	ENST00000357864.6	1370	3	-16	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	64.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGTCTACTTTTTGGAG	5	True	NA	19	True	NA	NA	NA	99558405	99564703	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_99558788_99560532_99560696_99563862
H1_mix_00078534	chr7	+	4647	4	FSM	ENSG00000197343.11	ENST00000424881.5	4666	4	19	0	18	0	multi-exon	FALSE	canonical	3	6	junction_1	16.0485374896143	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATTTGTTTCAAACAAAA	-6	True	NA	19	True	AATAAA	-19	NA	99558843	99576449	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_99559018_99560532_99560696_99571687_99571793_99572244
H1_mix_00078535	chr7	+	4605	8	NIC	ENSG00000197037.11	novel	4352	8	NA	NA	-329	-12	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	20.2050710951282	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTATGTATTTATCATTTG	5988	False	NA	NA	False	AATAAA	-2	NA	99616616	99632359	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_99616990_99618524_99618652_99619047_99619133_99619560_99619994_99621372_99621575_99622548_99622641_99624056_99624181_99629190
H1_mix_00078537	chr7	+	5722	7	FSM	ENSG00000197037.11	ENST00000481424.5	5722	7	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_6	12.7202812687281	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATCTTGTTTCATCTCTG	-12	True	NA	NA	False	AATAAA	-42	NA	99616945	99632399	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_99617017_99618524_99618652_99619047_99619133_99619560_99621575_99622548_99622641_99624056_99624181_99629190
H1_mix_00078540	chr7	+	1906	5	FSM	ENSG00000166529.16	ENST00000456748.6	1904	5	-2	0	-2	0	multi-exon	FALSE	canonical	3	15	junction_4	53.5933764564242	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCCTCAGGACTATTATT	-5	True	NA	7	True	AATAAA	-16	NA	100049771	100065038	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100049842_100056910_100057406_100057697_100057891_100063787_100063980_100064082
H1_mix_00078541	chr7	+	2028	4	FSM	ENSG00000166529.16	ENST00000292450.9	2009	4	-19	0	-19	0	multi-exon	FALSE	canonical	3	64	junction_1	37.7977071615021	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTCAGGACTATTATTAT	9756	False	NA	9	True	AATAAA	-18	NA	100049754	100065040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100049842_100056910_100057406_100057697_100057891_100063787
H1_mix_00078542	chr7	+	2129	5	NIC	ENSG00000166529.16	novel	2009	4	NA	NA	9	-2	intron_retention	FALSE	canonical	3	34	junction_1	47.9915357120399	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGCCTCAGGACTATTA	6	True	NA	5	True	AATAAA	-14	NA	100049782	100065036	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_100049842_100051477_100051611_100056910_100057406_100057697_100057891_100063787
H1_mix_00078545	chr7	+	1420	10	FSM	ENSG00000168090.10	ENST00000303904.8	1404	10	-16	0	-16	0	multi-exon	FALSE	canonical	3	2275	junction_1	133.519407198974	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTGAGCTAAATTAACTT	NA	False	NA	18	True	TATAAA	-18	NA	100088952	100092187	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100089067_100089289_100089416_100089614_100089747_100090398_100090488_100090591_100090655_100090901_100090950_100091037_100091153_100091237_100091331_100091419_100091521_100091648
H1_mix_00078546	chr7	+	875	6	FSM	ENSG00000168090.10	ENST00000474823.5	752	6	-123	0	-123	0	multi-exon	FALSE	canonical	3	2336	junction_2	116.087897732709	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGCATCGGCAGGAGAAT	571	False	NA	NA	False	NA	NA	NA	100090238	100091750	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100090655_100090901_100090950_100091037_100091153_100091237_100091331_100091419_100091521_100091648
H1_mix_00078549	chr7	+	1836	15	FSM	ENSG00000221838.10	ENST00000429084.5	1836	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	32.5865409803069	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGTGTACGTGCACGT	-12	True	NA	43	True	NA	NA	NA	100101556	100107177	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100101773_100101879_100101990_100102674_100102782_100102863_100102961_100103408_100103520_100103611_100103693_100104091_100104155_100104873_100104941_100105044_100105099_100105239_100105347_100105444_100105540_100105958_100106004_100106240_100106292_100106402_100106515_100106657
H1_mix_00078550	chr7	+	4588	15	FSM	ENSG00000221838.10	ENST00000359593.9	3591	15	-7	-990	0	-290	multi-exon	FALSE	canonical	3	88	junction_1	15.8539250274344	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTTCCTGCTGCAGCCG	-9	True	NA	NA	False	NA	NA	NA	100101635	100110029	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100101773_100101879_100101969_100102674_100102782_100102863_100102961_100103408_100103520_100103611_100103693_100104091_100104155_100104873_100104941_100105044_100105099_100105239_100105347_100105444_100105540_100105958_100106004_100106240_100106292_100106402_100106515_100106657
H1_mix_00078551	chr7	+	4556	14	FSM	ENSG00000221838.10	ENST00000422582.5	1814	14	0	-2742	0	-429	multi-exon	FALSE	canonical	3	24	junction_1	28.2669020495577	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTAAACACTGCCTGTGT	117	False	NA	-2	True	AATAAA	-14	NA	100102060	100109890	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100102394_100102674_100102782_100102863_100102961_100103408_100103520_100103611_100103693_100104091_100104155_100104873_100104941_100105044_100105099_100105239_100105347_100105444_100105540_100105958_100106004_100106240_100106292_100106402_100106515_100106657
H1_mix_00078556	chr7	+	1159	3	FSM	ENSG00000188186.11	ENST00000466498.2	371	3	-483	-305	-36	0	multi-exon	FALSE	canonical	3	1768	junction_1	70.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	NA	False	NA	26	True	AATAAA	-21	NA	100148875	100154203	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100149580_100153399_100153518_100153866
H1_mix_00078558	chr7	+	632	4	FSM	ENSG00000188186.11	ENST00000474831.5	564	4	-68	0	-46	0	multi-exon	FALSE	canonical	3	124	junction_2	728.904657688507	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	NA	False	NA	26	True	AATAAA	-21	NA	100148865	100154203	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100148976_100149498_100149566_100153399_100153518_100153866
H1_mix_00078559	chr7	+	714	4	FSM	ENSG00000188186.11	ENST00000468582.5	621	4	-102	9	-36	0	multi-exon	FALSE	canonical	3	260	junction_1	746.335194280842	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	NA	False	NA	26	True	AATAAA	-21	NA	100148875	100154203	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100149054_100149498_100149580_100153399_100153518_100153866
H1_mix_00078560	chr7	+	629	4	FSM	ENSG00000188186.11	ENST00000488241.5	613	4	-16	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	769.131111493136	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	2	True	NA	26	True	AATAAA	-21	NA	100148977	100154203	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100149054_100149498_100149580_100153399_100153518_100153849
H1_mix_00078561	chr7	+	720	4	FSM	ENSG00000188186.11	ENST00000473459.5	720	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	873.57706522601	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	324	False	NA	26	True	AATAAA	-21	NA	100149356	100154203	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100149580_100152715_100152758_100153399_100153518_100153866
H1_mix_00078562	chr7	+	1120	3	FSM	ENSG00000188186.11	ENST00000488338.2	533	3	-587	0	-587	0	multi-exon	FALSE	canonical	3	69	junction_1	920	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	3060	False	NA	26	True	AATAAA	-21	NA	100152092	100154203	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100152758_100153399_100153518_100153866
H1_mix_00078566	chr7	+	685	4	FSM	ENSG00000242294.6	ENST00000422479.5	683	4	-2	0	-2	0	multi-exon	FALSE	canonical	3	4	junction_3	82.8666934835033	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTTCCCAAGGTGTGGCT	-1	True	NA	4	True	AATAAA	-15	NA	100336122	100341328	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100336221_100338178_100338265_100338772_100338890_100340944
H1_mix_00078571	chr7	+	2661	17	FSM	ENSG00000272752.6	ENST00000444874.5	2661	17	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	96.7670366137147	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAGCAGTGCAAAGAGTT	48	False	NA	12	True	ATTAAA	-25	NA	100336242	100367663	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100336338_100338178_100338265_100338772_100338890_100345864_100345969_100349730_100349888_100351251_100351411_100352261_100352479_100352563_100352915_100352996_100353124_100353209_100353271_100353372_100353484_100355142_100355241_100356749_100356884_100358219_100358367_100358898_100359080_100359336_100359538_100367348
H1_mix_00078577	chr7	+	2622	4	FSM	ENSG00000121716.21_ENSG00000284012.1	ENST00000609309.3	1324	4	-1466	168	0	-70	multi-exon	FALSE	canonical	3	254	junction_1	39.2626483512709	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAGCAGTGCAAAGAGTT	46	False	NA	12	True	ATTAAA	-25	NA	100356650	100367663	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100358367_100358689_100359080_100359336_100359538_100367348
H1_mix_00078578	chr7	+	1860	3	NIC	ENSG00000121716.21	novel	2099	9	NA	NA	-311	0	intron_retention	FALSE	canonical	3	307	junction_1	21.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCCCTTTTCTCCTCGTCC	1201	False	NA	37	True	AATACA	-20	NA	100357805	100367733	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_100359080_100359336_100359538_100367348
H1_mix_00078588	chr7	+	996	7	NIC	ENSG00000106333.13	novel	765	5	NA	NA	22	-2	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	108.455315939587	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAATGGGTCAGATCTCC	14	False	NA	21	True	AATAAA	-12	NA	100604459	100608169	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_100604503_100605090_100605216_100605675_100605813_100606415_100606631_100607451_100607524_100607636_100607808_100607936
H1_mix_00078589	chr7	+	1209	6	ISM	ENSG00000106333.13	ENST00000223061.6	1516	9	2465	13	11	-9	3prime_fragment	FALSE	canonical	3	262	junction_1	26.6503283281839	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAATGAGGAATGGGTCA	382	False	NA	14	True	AATAAA	-5	NA	100604827	100608162	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_100605216_100605675_100605813_100606415_100606631_100607451_100607524_100607636_100607808_100607936
H1_mix_00078590	chr7	+	960	4	FSM	ENSG00000106333.13	ENST00000472348.1	960	4	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_3	5.24933858267454	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGGGTCAGATCTCCAT	390	False	NA	23	True	AATAAA	-14	NA	100606148	100608171	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100606631_100607451_100607524_100607636_100607808_100607936
H1_mix_00078592	chr7	+	826	3	FSM	ENSG00000106330.12	ENST00000490309.1	826	3	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	130	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTGAGTTGGGAGACTGGG	11	True	NA	NA	False	NA	NA	NA	100612183	100613704	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100612242_100612729_100613270_100613476
H1_mix_00078594	chr7	+	1851	11	NNC	ENSG00000172354.10	novel	1664	10	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	175	junction_1	289.594216102463	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTGGTCTCTGCCCTTGC	23	True	NA	27	True	CATAAA	-20	NA	100673526	100679167	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_100673816_100673839_100673924_100676176_100676323_100676534_100676574_100676692_100676800_100677351_100677416_100677497_100677661_100677751_100677819_100678097_100678300_100678397_100678615_100678694
H1_mix_00078597	chr7	+	2157	9	FSM	ENSG00000172354.10	ENST00000393924.1	1524	9	-640	7	212	0	multi-exon	FALSE	canonical	3	907	junction_2	115.680324601896	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTGGTCTCTGCCCTTGC	434	False	NA	27	True	CATAAA	-20	NA	100675497	100679167	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100676323_100676534_100676574_100676692_100676800_100677351_100677416_100677497_100677661_100677751_100677819_100678097_100678300_100678397_100678615_100678694
H1_mix_00078600	chr7	+	3065	12	NIC	ENSG00000146828.18	novel	1912	12	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	24.8855230244081	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCTGGCTGAGCAGTGC	NA	False	NA	13	True	AATAAA	-14	NA	100852698	100867009	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_100852840_100854155_100854379_100856867_100857177_100858834_100858943_100859049_100859162_100859884_100860043_100860149_100860233_100861137_100861263_100861391_100861585_100861736_100861912_100862680_100862828_100865718
H1_mix_00078604	chr7	+	3857	9	FSM	ENSG00000146828.18	ENST00000467972.5	4433	9	576	0	340	0	multi-exon	FALSE	canonical	3	65	junction_8	9.03811374126261	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCTGGCTGAGCAGTGC	319	False	NA	13	True	AATAAA	-14	NA	100857369	100867009	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100858943_100859049_100859162_100859884_100860043_100860149_100860233_100861137_100861263_100861391_100861585_100861736_100861912_100862680_100862828_100865718
H1_mix_00078612	chr7	+	2990	20	FSM	ENSG00000087087.20	ENST00000611405.5	2990	20	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_17	227.220870739734	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTCTCGTGTGTTA	-46	True	NA	15	True	AATAAA	-16	NA	100875102	100888664	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100875329_100875572_100875713_100881284_100881414_100881658_100881806_100882052_100882242_100884069_100884240_100884367_100884553_100884739_100884839_100884922_100885041_100885212_100885371_100885700_100885763_100885862_100885942_100886246_100886436_100886794_100886969_100887046_100887201_100887319_100887514_100887702_100887860_100888041_100888144_100888256_100888384_100888473
H1_mix_00078613	chr7	+	2978	20	FSM	ENSG00000087087.20	ENST00000618262.4	2955	20	-23	0	0	0	multi-exon	TRUE	canonical	3	322	junction_17	177.158817272514	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTCTCGTGTGTTA	-46	True	NA	15	True	AATAAA	-16	NA	100875102	100888664	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100875329_100875572_100875713_100881284_100881414_100881658_100881806_100882052_100882242_100884069_100884240_100884367_100884553_100884739_100884839_100884922_100885041_100885212_100885371_100885700_100885763_100885862_100885942_100886246_100886436_100886794_100886969_100887046_100887201_100887319_100887514_100887702_100887860_100888053_100888144_100888256_100888384_100888473
H1_mix_00078616	chr7	+	2915	20	FSM	ENSG00000087087.20	ENST00000618411.4	2893	20	-22	0	0	0	multi-exon	FALSE	canonical	3	322	junction_17	180.583342228193	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTCTCGTGTGTTA	14	True	NA	15	True	AATAAA	-16	NA	100875162	100888664	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100875329_100875572_100875713_100881284_100881414_100881658_100881806_100882052_100882242_100884069_100884240_100884367_100884553_100884739_100884839_100884922_100885041_100885215_100885371_100885700_100885763_100885862_100885942_100886246_100886436_100886794_100886969_100887046_100887201_100887319_100887514_100887702_100887860_100888053_100888144_100888256_100888384_100888473
H1_mix_00078617	chr7	+	727	4	FSM	ENSG00000087087.20	ENST00000423692.5	727	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	353.647658929996	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGCGGATTTGGAGGGGT	6195	False	NA	NA	False	NA	NA	NA	100881763	100884239	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100881806_100882052_100882242_100882764_100883091_100884069
H1_mix_00078623	chr7	+	1694	4	FSM	ENSG00000169894.18	ENST00000614399.1	1093	4	0	-601	0	0	multi-exon	FALSE	canonical	3	198	junction_1	43.6882898116494	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCTCTCTGTCTGTCTCC	27	False	NA	33	True	AATACA	-20	NA	100966237	100968347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100966560_100966651_100966744_100966898_100966952_100967120
H1_mix_00078625	chr7	+	566	3	FSM	ENSG00000205277.10	ENST00000467414.1	566	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	42.5	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGAGAAGTGAGAGGTTT	-13	True	NA	13	True	AATAAA	-19	NA	101017262	101018936	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_101017398_101017574_101017664_101018594
H1_mix_00078633	chr7	+	4684	6	FSM	ENSG00000106400.12	ENST00000492315.5	3958	6	-494	-232	-478	0	multi-exon	FALSE	canonical	3	16	junction_1	518.175645896254	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTCCTGTTTGGTCGTGG	-5	True	NA	34	True	AATAAA	-17	NA	101217686	101224190	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_101218218_101218318_101221797_101222603_101222775_101223476_101223557_101223672_101223843_101223936
H1_mix_00078634	chr7	+	2898	4	FSM	ENSG00000106400.12	ENST00000485387.1	2898	4	0	0	0	0	multi-exon	FALSE	canonical	3	1039	junction_1	29.3181779030614	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTCCTGTTTGGTCGTGG	2212	False	NA	34	True	AATAAA	-17	NA	101220380	101224190	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_101222775_101223476_101223557_101223672_101223843_101223936
H1_mix_00078637	chr7	+	1178	3	Fusion	ENSG00000288749.1_ENSG00000232301.3	novel	826	2	NA	NA	-83	-13	multi-exon	FALSE	canonical	3	27	junction_1	114	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTGAGATGATCAATTT	NA	False	NA	18	True	ATTAAA	-19	NA	101299474	101304565	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_+_101299867_101302798_101303029_101304009
H1_mix_00078638	chr7	+	3056	3	Fusion	ENSG00000288749.1_ENSG00000232301.3	novel	826	2	NA	NA	11	-16	multi-exon	FALSE	canonical	3	255	junction_2	20.5	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTTTGAGATGATCAA	5	True	NA	15	True	ATTAAA	-16	NA	101299623	101304562	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_+_101299867_101300768_101303029_101304009
H1_mix_00078639	chr7	+	1379	3	Fusion	ENSG00000232445.2_ENSG00000232301.3	novel	1194	3	NA	NA	20	0	multi-exon	FALSE	canonical	3	41	junction_1	220	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTTTGAGGTGGTCAA	NA	False	NA	10	True	ATTAAA	-17	NA	101299577	101311343	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_+_101299867_101308318_101308549_101310483
H1_mix_00078640	chr7	+	1277	4	Fusion	ENSG00000288749.1_ENSG00000232301.3	novel	826	2	NA	NA	41	-16	multi-exon	FALSE	canonical	2	16	junction_2	123.46929442848	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTTTGAGATGATCAA	16	False	NA	15	True	ATTAAA	-16	NA	101299653	101304562	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_+_101299867_101300768_101301050_101302798_101303029_101304009
H1_mix_00078641	chr7	+	4605	2	FSM	ENSG00000232445.2	ENST00000663483.1	4596	2	-9	0	-9	0	multi-exon	FALSE	canonical	3	481	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTTGTATCATTGGGCT	5471	False	NA	NA	False	ATTAAA	-2	NA	101308260	101314800	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_101308549_101310483
H1_mix_00078642	chr7	+	1229	3	FSM	ENSG00000232445.2	ENST00000419422.2	1194	3	-35	0	-9	0	multi-exon	FALSE	canonical	3	33	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTTTGAGGTGGTCAA	5471	False	NA	10	True	ATTAAA	-17	NA	101308260	101311343	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_101308549_101309613_101309695_101310483
H1_mix_00078644	chr7	+	2972	13	FSM	ENSG00000160963.14	ENST00000613501.1	2970	13	-2	0	0	0	multi-exon	TRUE	canonical	3	207	junction_2	60.178149873706	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTCTGTTTGTGTGGT	5	True	NA	15	True	AATAAA	-15	NA	101362874	101559024	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_101363191_101419976_101420100_101447689_101447788_101533081_101533144_101539892_101540050_101543997_101544097_101545337_101545491_101547155_101547240_101549170_101549224_101551107_101551144_101553325_101553377_101555786_101555872_101557369
H1_mix_00078647	chr7	+	3131	23	FSM	ENSG00000257923.12	ENST00000292538.9	2931	23	-226	26	-125	0	multi-exon	FALSE	canonical	3	120	junction_17	40.0033056485326	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAAATAAACCACGGTTG	NA	False	NA	-10	True	NA	NA	NA	101815778	102283932	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_101816094_101916114_101916226_102028097_102028146_102070338_102070418_102097363_102097502_102104335_102104460_102111697_102111775_102115206_102115274_102158559_102158609_102170445_102170551_102178468_102178658_102189812_102189872_102193841_102193891_102195506_102195604_102273365_102273494_102274243_102274311_102275246_102275360_102277948_102278066_102280036_102280121_102280803_102280861_102281839_102281921_102282711_102282777_102283020
H1_mix_00078648	chr7	+	2903	1	FSM	ENSG00000272219.1	ENST00000606640.1	1779	1	-1243	119	-1243	-119	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGCAGGAAGATGGCTTG	-1	True	NA	NA	False	NA	NA	NA	101958872	101961775	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_101958900_101961800
H1_mix_00078650	chr7	+	2216	9	FSM	ENSG00000160999.11	ENST00000444095.3	2236	9	20	0	20	0	multi-exon	FALSE	canonical	3	138	junction_1	29.6215715315714	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGGCTCTCCTGTCGTCCT	-7	True	NA	11	True	ATTAAA	-21	NA	102286887	102321711	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_102287095_102300521_102301280_102306720_102306823_102308814_102308907_102314335_102314428_102314511_102314683_102317186_102317396_102320330_102320503_102321298
H1_mix_00078651	chr7	+	1447	8	NNC	ENSG00000160999.11	novel	2236	9	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	72.9344128064974	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGGCTCTCCTGTCGTCCT	0	True	NA	11	True	ATTAAA	-21	NA	102286894	102321711	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_102287091_102306720_102306823_102308814_102308907_102314335_102314428_102314511_102314683_102317186_102317396_102320330_102320503_102321298
H1_mix_00078654	chr7	+	3430	10	FSM	ENSG00000128563.13	ENST00000496391.5	3430	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	72.5393039481628	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTTTCTCTGTCTGGG	11	False	NA	20	True	AATAAA	-32	NA	102363896	102426676	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_102364412_102365954_102366077_102375822_102375950_102376211_102376323_102395976_102396538_102397619_102397699_102399547_102399649_102404597_102404684_102407433_102407499_102425013
H1_mix_00078656	chr7	+	2159	6	FSM	ENSG00000128563.13	ENST00000397912.3	2159	6	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	32.8998480239651	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGAAACCTGTTTTTC	-24	True	NA	10	True	AATAAA	-22	NA	102396362	102426666	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_102396538_102397619_102397699_102399547_102399649_102404597_102404684_102407433_102407499_102425013
H1_mix_00078658	chr7	+	11617	3	FSM	ENSG00000160991.17	ENST00000498661.6	10725	3	13	-905	13	905	multi-exon	FALSE	canonical	3	131	junction_2	7.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACGGTGGGGGACAGGAG	2600	False	NA	NA	False	NA	NA	NA	102436172	102457730	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_102436334_102438943_102439182_102446512
H1_mix_00078665	chr7	+	2274	4	FSM	ENSG00000170632.14	ENST00000541300.5	2266	4	-8	0	-8	0	multi-exon	FALSE	canonical	3	37	junction_3	242.194137005833	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAATCACTTACAAGGT	-28	True	NA	5	True	AATAAA	-5	NA	103074872	103099749	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_103075412_103083681_103083831_103086629_103086765_103098298
H1_mix_00078667	chr7	+	2453	6	FSM	ENSG00000170632.14	ENST00000428183.6	2445	6	-8	0	-8	0	multi-exon	FALSE	canonical	3	156	junction_4	196.674756895744	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCACTTACAAGGTTA	-28	True	NA	7	True	AATAAA	-7	NA	103074872	103099751	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_103075412_103075776_103075882_103083681_103083831_103086629_103086765_103097276_103097349_103098298
H1_mix_00078669	chr7	+	2355	5	FSM	ENSG00000170632.14	ENST00000454559.5	2347	5	-8	0	-8	0	multi-exon	FALSE	canonical	3	156	junction_3	174.861909803136	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTACAAGGTTATACATAT	-28	True	NA	14	True	AATAAA	-14	NA	103074872	103099758	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_103075412_103083681_103083831_103086629_103086765_103097276_103097349_103098298
H1_mix_00078671	chr7	+	2371	7	FSM	ENSG00000170632.14	ENST00000323716.8	2371	7	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_2	171.170236898825	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTACAAGGTTATACATATT	-12	True	NA	15	True	AATAAA	-15	NA	103075139	103099759	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_103075412_103075776_103075882_103083681_103083831_103086629_103086765_103092476_103092654_103097276_103097349_103098298
H1_mix_00078681	chr7	+	2546	15	FSM	ENSG00000005483.22	ENST00000476671.5	2523	15	-23	0	5	0	multi-exon	FALSE	canonical	3	30	junction_1	27.3436184399167	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTTCAGAATGTCTTTT	-5	True	NA	NA	False	AATAAA	-16	NA	105014194	105091609	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_105014536_105038125_105038200_105040838_105041024_105062163_105062279_105063350_105063581_105066726_105066808_105073618_105073678_105074642_105074816_105076042_105076082_105076962_105077194_105077302_105077434_105078845_105078964_105081687_105081798_105090008_105090274_105091215
H1_mix_00078682	chr7	+	8900	27	FSM	ENSG00000005483.22	ENST00000311117.8	7782	27	237	-1355	10	1355	multi-exon	FALSE	canonical	3	29	junction_26	28.6739733131307	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTGGAAAAAAAAAAACCAAA	159	False	NA	NA	False	NA	NA	NA	105014441	105116374	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_105014536_105038125_105038200_105040838_105041024_105062163_105062279_105063350_105063581_105066726_105066808_105073618_105073678_105074642_105074816_105076042_105076082_105076962_105077194_105077302_105077434_105078845_105078964_105081687_105081798_105090008_105090274_105091215_105091315_105101424_105101590_105101885_105102195_105105438_105105694_105105858_105106004_105106521_105106773_105107165_105107223_105107361_105107926_105108941_105109229_105110279_105110369_105110476_105110603_105110770_105110869_105111824
H1_mix_00078683	chr7	+	3090	16	NIC	ENSG00000005483.22	novel	6840	26	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_4	19.0678321322122	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTCAGACTTAAGCAATTA	11	True	NA	NA	False	AATAAA	-17	NA	105014210	105102649	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_105014536_105040838_105041024_105062163_105062279_105063350_105063581_105066726_105066808_105073618_105073678_105074642_105074816_105076042_105076082_105076962_105077194_105077302_105077434_105078845_105078964_105081687_105081798_105090008_105090274_105091215_105091315_105101424_105101590_105101885
H1_mix_00078687	chr7	+	2882	15	FSM	ENSG00000135249.8	ENST00000257700.7	2860	15	-22	0	-2	0	multi-exon	TRUE	canonical	3	129	junction_8	14.4739385779816	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGAATGCATATTTGTAA	-17	True	NA	9	True	AATAAA	-16	NA	105532178	105567677	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_105532358_105532823_105532870_105536564_105536750_105542407_105542650_105546909_105547084_105547183_105547334_105548553_105548711_105550054_105550166_105550260_105550487_105551569_105551708_105555027_105555228_105563732_105563948_105565276_105565458_105565529_105565649_105567118
H1_mix_00078692	chr7	+	3689	11	FSM	ENSG00000005249.13	ENST00000265717.5	3689	11	0	0	0	0	multi-exon	TRUE	canonical	3	281	junction_5	51.9893258275196	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGGATGTCATTATTTA	-10	True	NA	13	True	ATTAAA	-16	NA	107044704	107161811	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_107045215_107070280_107070317_107121951_107122005_107128211_107128296_107140846_107140954_107146307_107146462_107150921_107151024_107153176_107153252_107156983_107157050_107157185_107157325_107159448
H1_mix_00078695	chr7	+	2842	11	FSM	ENSG00000105856.14	ENST00000222574.9	2834	11	-22	14	-9	0	multi-exon	FALSE	canonical	3	40	junction_1	49.6624606720207	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGTTGCTTATCTCTG	853	False	NA	14	True	AATAAA	-6	NA	107168980	107202508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_107169186_107179878_107180063_107182372_107182602_107185800_107185943_107186360_107186473_107186568_107186682_107189291_107189449_107190172_107190318_107195833_107196152_107200159_107200302_107201413
H1_mix_00078697	chr7	+	2707	9	FSM	ENSG00000105856.14	ENST00000463202.5	2646	9	-61	0	-61	0	multi-exon	FALSE	canonical	3	183	junction_8	12.608900626145	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCCACAGGGCTCACAACA	9772	False	NA	NA	False	NA	NA	NA	107179816	107201404	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_107180063_107182372_107182602_107185800_107185943_107186360_107186473_107186568_107186682_107189291_107189449_107190172_107190318_107195833_107196152_107200159
H1_mix_00078698	chr7	+	1699	8	FSM	ENSG00000105865.11	ENST00000443233.5	1676	8	-23	0	-6	0	multi-exon	FALSE	canonical	0	0	junction_1	26.1174740160604	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGATGGGTAGAGTGGGA	-8	True	NA	NA	False	NA	NA	NA	107563964	107577850	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_107564248_107564587_107564677_107567049_107567187_107571144_107571267_107573703_107573884_107575187_107575311_107576365_107576593_107577312
H1_mix_00078699	chr7	+	1390	7	FSM	ENSG00000105865.11	ENST00000431839.5	1375	7	-15	0	-6	0	multi-exon	FALSE	canonical	3	4	junction_1	25.1047804212664	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAATACTAAGAAATTATG	-8	True	NA	NA	False	AATAAA	-2	NA	107563964	107577909	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_107564060_107564587_107564677_107567049_107567187_107571144_107571267_107575187_107575311_107576365_107576593_107577312
H1_mix_00078700	chr7	+	2279	8	FSM	ENSG00000105865.11	ENST00000265720.8	2266	8	-13	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	13.6785248040981	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGTGGTGCCATCTTTT	-15	True	NA	113	True	AATGAA	-16	NA	107563957	107578523	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_107564210_107564587_107564677_107567049_107567187_107571144_107571267_107573703_107573822_107575187_107575311_107576365_107576593_107577312
H1_mix_00078703	chr7	+	2911	8	FSM	ENSG00000075790.12	ENST00000005259.9	2911	8	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	22.5125815163569	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATGTTGCATATTAAATT	-1	True	NA	12	True	AATAAA	-20	NA	107580245	107620478	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_107580302_107580758_107580865_107583881_107583983_107593954_107594106_107595866_107596003_107600396_107600506_107613331_107613433_107618327
H1_mix_00078704	chr7	+	2516	8	NIC	ENSG00000075790.12	novel	2911	8	NA	NA	-72	1360	combination_of_known_junctions	FALSE	canonical	3	25	junction_7	65.3121234487729	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTGCATGCTCAACTT	167	False	NA	4	True	ATTAAA	-16	NA	107580173	107623313	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_107580302_107580758_107580865_107583881_107583983_107593954_107594106_107595866_107596003_107600396_107600506_107613331_107613433_107621629
H1_mix_00078708	chr7	+	2003	6	FSM	ENSG00000105879.12	ENST00000222597.6	2003	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	133.526626558151	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTACTAGAATTTGCTGTAA	-5	True	NA	9	True	AATAAA	-17	NA	107744141	107759686	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_107744177_107748879_107749048_107753413_107753512_107753894_107753979_107755417_107755492_107758142
H1_mix_00078709	chr7	+	4050	7	FSM	ENSG00000105879.12	ENST00000432748.5	573	7	10	-3487	-3	0	multi-exon	FALSE	canonical	3	39	junction_2	153.678958293653	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCCTAGATGAATTTTT	5	True	NA	NA	False	AATAAA	-19	NA	107744151	107761667	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_107744177_107748879_107749048_107752544_107752618_107753410_107753512_107753894_107753979_107755417_107755492_107758142
H1_mix_00078710	chr7	+	256	1	Intergenic	novelGene_1391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACATGCCACCACACCCAG	NA	False	NA	NA	False	NA	NA	NA	107770143	107770399	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_107770100_107770400
H1_mix_00078711	chr7	+	1993	13	FSM	ENSG00000091140.15	ENST00000440410.5	1993	13	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	339.91456238623	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTCTATAAACCGAACT	4	True	NA	-16	True	NA	NA	NA	107891172	107919713	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_107891290_107893199_107893279_107901737_107901818_107903477_107903548_107904957_107905059_107905360_107905505_107906266_107906369_107915505_107915697_107916793_107916965_107917272_107917463_107917923_107918062_107919009_107919100_107919193
H1_mix_00078713	chr7	+	1497	1	FSM	ENSG00000273055.1	ENST00000608515.1	625	1	-275	-597	-275	597	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTGACACCCAAGAGAAATA	6466	False	NA	NA	False	NA	NA	NA	107941840	107943337	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_107941800_107943300
H1_mix_00078717	chr7	+	1834	13	FSM	ENSG00000006652.15	ENST00000005558.8	1834	13	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_1	87.7114904419914	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTGAAGACTATTTTCTA	-16	True	NA	NA	False	NA	NA	NA	112423143	112475527	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_112423433_112450507_112450783_112455762_112455868_112456001_112456087_112456913_112457039_112458860_112459019_112461865_112461917_112462000_112462180_112462269_112462379_112467980_112468116_112472218_112472348_112472765_112472862_112475429
H1_mix_00078718	chr7	+	3379	13	FSM	ENSG00000006652.15	ENST00000675578.1	3650	13	271	0	14	0	multi-exon	FALSE	canonical	2	8	junction_1	91.0091570484348	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATTATAAATAAATAATGAA	-2	True	NA	-26	True	NA	NA	NA	112423157	112477156	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_112423433_112450577_112450783_112455762_112455868_112456001_112456087_112456913_112457039_112458860_112459019_112461865_112461917_112462000_112462180_112462269_112462379_112467980_112468116_112472218_112472348_112472765_112472862_112475429
H1_mix_00078719	chr7	+	3264	12	FSM	ENSG00000006652.15	ENST00000403825.8	3269	12	0	5	0	-2	multi-exon	FALSE	canonical	3	224	junction_4	48.8157270417185	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATAGGTTTTTGTTTGTTT	1	True	NA	16	True	AATAAA	-30	NA	112450459	112477198	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_112450783_112455762_112455868_112456001_112456087_112456913_112457039_112458860_112459019_112461865_112461917_112462000_112462180_112462269_112462379_112467980_112468116_112472218_112472348_112472765_112472862_112475429
H1_mix_00078727	chr7	+	596	3	FSM	ENSG00000135269.18	ENST00000455989.1	577	3	-19	0	14	0	multi-exon	FALSE	canonical	3	12	junction_1	115	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGTCTCCCAGAGAGG	-18	True	NA	NA	False	NA	NA	NA	116210519	116250288	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_116210735_116249019_116249273_116250160
H1_mix_00078729	chr7	+	699	3	FSM	ENSG00000135269.18	ENST00000393484.2	699	3	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_2	6	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAATGGGAATGAGATT	156	False	NA	NA	False	AATAAA	-18	NA	116250434	116252738	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_116250497_116251759_116251976_116252317
H1_mix_00078733	chr7	+	2733	2	FSM	ENSG00000105974.13	ENST00000393467.1	2628	2	-105	0	-89	0	multi-exon	FALSE	canonical	3	117	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGTCAGCTTTATTATT	380	False	NA	13	True	AATAAA	-15	NA	116526187	116561176	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_116526690_116558945
H1_mix_00078735	chr7	+	659	4	FSM	ENSG00000105976.16	ENST00000422097.1	688	4	0	29	0	-29	multi-exon	FALSE	canonical	3	39	junction_1	7.34846922834953	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATGTGTGGGTTTTGGCT	272	False	NA	2	True	AATAAA	-14	NA	116758516	116769880	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_116758621_116759390_116759491_116763049_116763269_116769644
H1_mix_00078743	chr7	+	1932	3	FSM	ENSG00000128534.8	ENST00000422760.1	1920	3	-12	0	0	0	multi-exon	FALSE	canonical	3	634	junction_2	60.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTTTTTTGCCTAAATA	17	True	NA	-7	True	ATTAAA	-29	NA	118184143	118192164	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_118185695_118188277_118188406_118191911
H1_mix_00078744	chr7	+	12389	4	FSM	ENSG00000128534.8	ENST00000249299.7	12384	4	-20	15	0	-15	multi-exon	FALSE	canonical	3	634	junction_3	53.1308656892478	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTACAGAGGCTACTAAG	17	True	NA	NA	False	AATAAA	-3	NA	118184143	118204020	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_118184255_118185653_118185695_118188277_118188406_118191911
H1_mix_00078748	chr7	+	1225	5	FSM	ENSG00000071243.16	ENST00000339121.9	1222	5	-4	1	-4	1	multi-exon	FALSE	canonical	3	32	junction_4	67.2992384800898	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGTGTGTATTCATCT	NA	False	NA	7	True	CATAAA	-19	NA	120950758	120956979	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_120950925_120951163_120951236_120953303_120953405_120955558_120955625_120956159
H1_mix_00078749	chr7	+	3767	12	FSM	ENSG00000071243.16	ENST00000315870.10	3749	12	-18	0	-4	0	multi-exon	FALSE	canonical	3	110	junction_5	25.1323768003817	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGCTGAGTGTTTGATAA	NA	False	NA	12	True	AATAAA	-22	NA	120950758	120977216	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_120950925_120951163_120951236_120953303_120953405_120955558_120955625_120964741_120964839_120966625_120966698_120967528_120967649_120967933_120968092_120969010_120969205_120970687_120970881_120973204_120973244_120974727
H1_mix_00078750	chr7	+	1759	4	FSM	ENSG00000071243.16	ENST00000445699.5	1723	4	-36	0	-4	0	multi-exon	FALSE	canonical	3	174	junction_3	9.17726659862414	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTGTGTATTCATC	NA	False	NA	6	True	CATAAA	-18	NA	120950758	120956978	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_120950925_120951163_120951236_120953303_120953405_120955558
H1_mix_00078755	chr7	+	8103	30	FSM	ENSG00000106278.12	ENST00000393386.7	8103	30	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_12	102.93120198681	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTGCTTGTGGAGC	0	True	NA	17	True	AATAAA	-19	NA	121873160	122062036	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_121873558_121928155_121928222_121967950_121968131_121972540_121972693_121976172_121976269_121976784_121976852_121983664_121983823_121983966_121984118_121996381_121996567_121997879_121998007_122004613_122004661_122010333_122013890_122019123_122019269_122028551_122028644_122031473_122031560_122034094_122034116_122034281_122034379_122036599_122036683_122038754_122038890_122039453_122039589_122040815_122040980_122042607_122042744_122044421_122044569_122051427_122051522_122051865_122051940_122053909_122054039_122054940_122055088_122058799_122058943_122059752_122059889_122061079
H1_mix_00078757	chr7	+	7866	29	FSM	ENSG00000106278.12	ENST00000652298.1	7866	29	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_15	115.66182673322	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATAAATATTGCCATTAA	16	True	NA	-3	True	NA	NA	NA	121873356	122062016	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_121873558_121928155_121928222_121967950_121968131_121972540_121972693_121976172_121976269_121976784_121976852_121983664_121983823_121983966_121984118_121996381_121996567_121997879_121998007_122004613_122004661_122010333_122013890_122019123_122019269_122028551_122028644_122031473_122031560_122034281_122034379_122036599_122036683_122038754_122038890_122039453_122039589_122040815_122040980_122042607_122042744_122044421_122044569_122051427_122051522_122051865_122051940_122053909_122054039_122054940_122055088_122058799_122058943_122059752_122059889_122061079
H1_mix_00078758	chr7	+	7822	30	FSM	ENSG00000106278.12	ENST00000651320.1	7822	30	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_22	144.412154586759	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCAAATGGTTTTTATCC	-4	True	NA	-40	True	NA	NA	NA	121873480	122061979	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_121873558_121928155_121928222_121967950_121968131_121972540_121972693_121976172_121976269_121976784_121976852_121983664_121983823_121983966_121984118_121996381_121996567_121997879_121998007_122004613_122004661_122010333_122013890_122019123_122019269_122028551_122028644_122031473_122031560_122034281_122034379_122036599_122036683_122038754_122038890_122039453_122039589_122040815_122040980_122042607_122042744_122044421_122044569_122047673_122047791_122051427_122051522_122051865_122051940_122053909_122054039_122054940_122055088_122058799_122058943_122059752_122059889_122061079
H1_mix_00078769	chr7	+	1032	6	FSM	ENSG00000004059.11	ENST00000000233.10	1032	6	0	0	0	0	multi-exon	FALSE	canonical	3	1712	junction_4	126.173531297178	345	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGTGTTGTCTGTAGCCT	6	True	NA	27	True	AATAAA	-17	NA	127588410	127591700	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_127588566_127589082_127589164_127589484_127589595_127590065_127590138_127590962_127591089_127591212
H1_mix_00078773	chr7	+	1364	2	FSM	ENSG00000135245.10	ENST00000257696.5	1364	2	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTCATGTTGACTTC	12	True	NA	46	True	AATAAA	-19	NA	128455877	128458418	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_128456024_128457200
H1_mix_00078776	chr7	+	1966	10	NIC	ENSG00000165055.16	novel	5841	9	NA	NA	18	700	combination_of_known_junctions	FALSE	canonical	3	10	junction_9	111.090998179615	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCATCGCTCCACCTCA	-7	True	NA	NA	False	NA	NA	NA	128476771	128503532	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_128476876_128477081_128477174_128479157_128479514_128480646_128480697_128488100_128488162_128493803_128493944_128498035_128498143_128500902_128500969_128501761_128501833_128502613
H1_mix_00078785	chr7	+	4406	8	FSM	ENSG00000128595.17	ENST00000542996.6	4225	8	31	-212	31	-118	multi-exon	FALSE	canonical	3	51	junction_1	1040.30335057833	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCGTATAACTGGAGAGACC	NA	False	NA	NA	False	NA	NA	NA	128739322	128771689	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_128739433_128747552_128748368_128748572_128748805_128754528_128754723_128758870_128759038_128759791_128759853_128767455_128767656_128769062
H1_mix_00078786	chr7	+	2442	7	FSM	ENSG00000128595.17	ENST00000449187.6	2438	7	-4	0	0	0	multi-exon	FALSE	canonical	3	483	junction_3	870.227556447163	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGGAAA	-6	True	NA	NA	False	NA	NA	NA	128739358	128770576	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_128739433_128748572_128748805_128754528_128754723_128758870_128759038_128759791_128759853_128767455_128767656_128769062
H1_mix_00078787	chr7	+	5315	7	FSM	ENSG00000128595.17	ENST00000249364.9	5266	7	-36	-13	31	13	multi-exon	FALSE	canonical	3	1763	junction_2	292.981607310463	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAACTTCATTTTCCTGAC	NA	False	NA	34	True	AATAAA	-27	NA	128739322	128773413	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_128739433_128748572_128748805_128754261_128754456_128758870_128759038_128759791_128759853_128767455_128767656_128769062
H1_mix_00078791	chr7	+	2718	14	NIC	ENSG00000128596.17	novel	4246	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_11	17.9295135355453	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACATGAGACTGTGGATTT	26	True	NA	NA	False	ATTAAA	-12	NA	128791457	128822125	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_128791552_128792319_128792428_128794347_128794603_128794693_128794769_128801185_128801510_128804649_128804762_128805358_128805525_128805760_128805902_128806236_128806396_128806687_128806859_128807359_128807546_128814637_128814920_128815613_128815932_128821798
H1_mix_00078793	chr7	+	1597	9	NIC	ENSG00000128596.17	novel	1720	10	NA	NA	11	1	combination_of_known_splicesites	FALSE	canonical	3	17	junction_8	22.2640405137971	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACTGTGGATTTTTATTT	37	True	NA	NA	False	ATTAAA	-18	NA	128791468	128822131	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_128791552_128792319_128792428_128794347_128794603_128794693_128794769_128801185_128801510_128804649_128804762_128805358_128805525_128805760_128805902_128821798
H1_mix_00078808	chr7	+	2880	20	FSM	ENSG00000128578.10	ENST00000435494.2	2866	20	-14	0	0	0	multi-exon	FALSE	canonical	3	18	junction_7	6.03728030346479	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCGAGTTGTCCCAAAAT	-14	True	NA	3	True	AATAAA	-15	NA	129434431	129483631	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_129434602_129440021_129440092_129444023_129444099_129451612_129451748_129453226_129453348_129454141_129454211_129454420_129454528_129455243_129455372_129456438_129456643_129458214_129458451_129458711_129458778_129459516_129459581_129460300_129460373_129462965_129463041_129464043_129464142_129464611_129464739_129467349_129467451_129470648_129470716_129480784_129480890_129482841
H1_mix_00078809	chr7	+	5135	21	FSM	ENSG00000128578.10	ENST00000249344.7	5116	21	-19	0	-19	0	multi-exon	FALSE	canonical	3	13	junction_20	6.71490878567982	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTGTTTAAATTCTTCA	8	False	NA	NA	False	AATAAA	-25	NA	129434412	129488399	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_129434602_129440021_129440092_129444023_129444099_129451612_129451748_129453226_129453348_129454141_129454211_129454420_129454528_129455243_129455372_129456438_129456643_129458214_129458451_129458711_129458778_129459516_129459581_129460300_129460373_129462965_129463041_129464043_129464142_129464611_129464739_129467349_129467451_129470648_129470716_129480784_129480890_129482841_129483047_129485578
H1_mix_00078816	chr7	+	2473	11	FSM	ENSG00000106484.16	ENST00000427521.6	2473	11	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_1	682.74754485095	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGACCAAGTAGAATAAAAAG	-7	True	NA	NA	False	NA	NA	NA	130486335	130506465	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_130486520_130495367_130495523_130497155_130497236_130497935_130498014_130498138_130498276_130498418_130498478_130499874_130499916_130500461_130500533_130502643_130502721_130503932_130503997_130504938
H1_mix_00078817	chr7	+	2660	12	FSM	ENSG00000106484.16	ENST00000223215.10	2646	12	-14	0	-14	0	multi-exon	FALSE	canonical	3	547	junction_1	409.739667400317	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGACCAAGTAGAATAAAAAG	-16	True	NA	NA	False	NA	NA	NA	130492070	130506465	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_130492340_130495367_130495523_130497155_130497236_130497935_130498014_130498138_130498276_130498418_130498478_130499874_130499916_130500461_130500533_130500788_130500891_130502643_130502721_130503932_130503997_130504938
H1_mix_00078819	chr7	+	4307	17	FSM	ENSG00000128585.18	ENST00000494785.5	2386	17	-10	-1911	-3	1911	multi-exon	FALSE	canonical	2	219	junction_9	45.5435488708335	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAACTGACTTATTTTTAG	-11	True	NA	NA	False	ACTAAA	-6	NA	131327872	131480871	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_131327998_131375423_131375494_131387119_131387263_131388883_131388973_131397266_131397377_131399240_131399434_131411305_131411384_131414644_131414711_131429032_131429146_131437784_131437998_131443480_131443703_131445773_131445904_131463216_131463365_131464293_131464409_131466275_131466416_131470841_131470945_131478622
H1_mix_00078821	chr7	+	2472	18	FSM	ENSG00000128585.18	ENST00000458153.5	2448	18	-24	0	-3	0	multi-exon	FALSE	canonical	2	20	junction_5	89.5499319453605	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATATATATATATATAT	-11	True	NA	13	True	AATAAA	-25	NA	131327872	131487962	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_131327998_131375423_131375494_131387119_131387263_131388883_131388973_131397266_131397377_131399237_131399434_131411305_131411384_131414644_131414711_131429032_131429146_131437784_131437998_131443480_131443703_131445773_131445904_131463216_131463365_131464293_131464409_131466275_131466416_131470841_131470945_131478622_131478678_131487606
H1_mix_00078823	chr7	+	568	2	FSM	ENSG00000131558.15	ENST00000481074.1	568	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTCAACTCGTTTATTT	14	True	NA	25	True	AATAAA	-37	NA	133253098	133254018	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_133253188_133253539
H1_mix_00078825	chr7	+	3094	20	FSM	ENSG00000155530.3	ENST00000285928.2	3163	20	69	0	10	0	multi-exon	TRUE	canonical	1	2	junction_18	5.28469278570999	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTCACCCTTCTTTGA	16	True	NA	NA	False	AATAAA	-18	NA	134127367	134264591	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_134127665_134137022_134137131_134139435_134139518_134143061_134143163_134148237_134148320_134158034_134158160_134163396_134163541_134174555_134174637_134176976_134177064_134178502_134178610_134183733_134183854_134191654_134191752_134196991_134197106_134199219_134199422_134201480_134201577_134221778_134221919_134247555_134247645_134248950_134249077_134258256_134258406_134263844
H1_mix_00078827	chr7	+	1711	3	FSM	ENSG00000172331.12	ENST00000344924.8	1711	3	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_2	13.5	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCTCCGTGTGTTTGGTG	-2	True	NA	29	True	AATAAA	-40	NA	134646852	134679816	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_134646938_134661446_134662109_134678852
H1_mix_00078829	chr7	+	5011	15	FSM	ENSG00000122786.20	ENST00000361675.7	5011	15	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	268.260648456318	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGGTTGAGTCTTGGTT	-11	True	NA	13	True	AATAAA	-25	NA	134779633	134970729	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_134779750_134843883_134843972_134867692_134867805_134928753_134928901_134932987_134934078_134935687_134935766_134941091_134941238_134947507_134947770_134950373_134950515_134958068_134958113_134958208_134958291_134959973_134960112_134960532_134960629_134965305_134965387_134968339
H1_mix_00078830	chr7	+	4114	14	FSM	ENSG00000122786.20	ENST00000361901.6	4114	14	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_3	173.474074252811	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTTCTCACTTATTT	9	False	NA	41	True	AATAAA	-21	NA	134779677	134970641	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_134779750_134843883_134843972_134867692_134867805_134928753_134928901_134932987_134933391_134941091_134941238_134947507_134947770_134950373_134950515_134958068_134958113_134958208_134958291_134959973_134960112_134960532_134960629_134965305_134965387_134968339
H1_mix_00078831	chr7	+	4300	13	FSM	ENSG00000122786.20	ENST00000393118.6	4281	13	-19	0	-19	0	multi-exon	FALSE	canonical	3	75	junction_3	255.990925945954	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCAGGTTGAGTCTTGGT	NA	False	NA	12	True	AATAAA	-24	NA	134891380	134970728	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_134891674_134928753_134928901_134932987_134933391_134935687_134935766_134941091_134941238_134947507_134947770_134950373_134950515_134958068_134958113_134958208_134958291_134959973_134960112_134960532_134960629_134965305_134965387_134968339
H1_mix_00078832	chr7	+	4164	13	NNC	ENSG00000122786.20	novel	4281	13	NA	NA	-19	43500	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	221.324924539064	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAATGTTGATACCTATTT	NA	False	NA	NA	False	NA	NA	NA	134891380	135014229	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_134891674_134928753_134928901_134932987_134933391_134941091_134941238_134947507_134947770_134950373_134950515_134958068_134958113_134958208_134958291_134959973_134960112_134960532_134960629_134965305_134965387_134968339_134970639_135014197
H1_mix_00078833	chr7	+	3905	12	NIC	ENSG00000122786.20	novel	4173	13	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_11	208.75185949585	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTTCTCACTTATTT	NA	False	NA	41	True	AATAAA	-21	NA	134891396	134970641	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_134891674_134928753_134928901_134932987_134933391_134941091_134941238_134947507_134947770_134950373_134950515_134958068_134958113_134958208_134958291_134959973_134960112_134960532_134960629_134965305_134965387_134968553
H1_mix_00078834	chr7	+	4200	12	FSM	ENSG00000122786.20	ENST00000424922.5	2124	12	-210	-1866	0	-3	multi-exon	FALSE	canonical	3	422	junction_1	107.809826443075	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTCAGGTTGAGTCTT	NA	False	NA	9	True	AATAAA	-21	NA	134891399	134970725	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_134891674_134928753_134928901_134932987_134933391_134941091_134941238_134947507_134947770_134950373_134950515_134958068_134958113_134958208_134958291_134959973_134960112_134960532_134960629_134965305_134965387_134968339
H1_mix_00078843	chr7	+	1447	8	FSM	ENSG00000155561.15	ENST00000461255.5	1447	8	0	0	0	0	multi-exon	FALSE	canonical	3	603	junction_1	73.8951270106383	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGGTTAATCTTTTGAT	NA	False	NA	NA	False	AATAAA	-25	NA	135635314	135648757	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_135635658_135637930_135638060_135638556_135638684_135643191_135643359_135644894_135645019_135645467_135645597_135646157_135646232_135648403
H1_mix_00078849	chr7	+	8488	19	FSM	ENSG00000122779.18	ENST00000343526.9	8488	19	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_9	125.460288341042	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTGGTATGGAATAAAGG	6	True	NA	10	True	AATAAA	-21	NA	138460258	138589996	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_138460913_138504289_138504409_138515211_138515360_138519188_138519322_138525240_138525358_138529115_138529231_138538656_138538804_138551062_138551181_138554697_138554967_138567480_138567655_138570829_138571004_138573506_138573643_138576372_138576446_138577419_138577589_138579203_138579533_138580561_138580695_138581696_138581772_138583849_138584000_138584741
H1_mix_00078850	chr7	+	3799	19	FSM	ENSG00000122779.18	ENST00000415680.6	3799	19	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_9	170.922515113836	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTTGATTTTTGTTTT	2	True	NA	NA	False	ATTAAA	-17	NA	138460434	138585585	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_138460913_138504289_138504409_138515211_138515360_138519188_138519322_138525240_138525358_138529115_138529231_138538656_138538804_138551062_138551181_138554697_138554865_138567480_138567655_138570829_138571004_138573506_138573643_138576372_138576446_138577419_138577589_138579203_138579533_138580561_138580695_138581696_138581772_138583849_138584000_138584741
H1_mix_00078856	chr7	+	1005	2	FSM	ENSG00000164898.13	ENST00000297534.7	1014	2	0	9	0	-9	multi-exon	FALSE	canonical	3	452	junction_1	0	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCCTTTGTCCTTTTCCC	-11	True	NA	NA	False	AATAAA	-11	NA	139341336	139346319	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_139341523_139345500
H1_mix_00078858	chr7	+	2783	11	FSM	ENSG00000146963.18	ENST00000619796.4	2783	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	291.780071286577	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGACTTAAGTTTCTGC	324	False	NA	32	True	AATAAA	-22	NA	139359845	139423457	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_139360323_139374400_139374472_139376061_139376157_139398598_139398698_139402136_139402248_139405643_139405788_139407173_139407351_139409562_139409655_139412550_139412581_139417537_139417730_139422162
H1_mix_00078860	chr7	+	2837	9	FSM	ENSG00000146963.18	ENST00000498518.1	2837	9	0	0	0	0	multi-exon	FALSE	canonical	3	668	junction_7	59.4132771356706	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCTGTGGGCATTTCCT	7465	False	NA	22	True	ATTAAA	-34	NA	139375203	139423201	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_139376157_139398598_139398698_139402136_139402248_139405643_139405788_139407173_139407351_139409562_139409655_139412550_139412581_139417537_139417730_139422162
H1_mix_00078862	chr7	+	730	5	FSM	ENSG00000059377.18	ENST00000481440.5	728	5	-2	0	0	0	multi-exon	FALSE	canonical	2	21	junction_4	1.78535710713571	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAAGCATTGCAAAGTC	-9	True	NA	NA	False	ATTAAA	-16	NA	139778253	139797483	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_139778472_139780739_139780825_139782665_139782730_139787337_139787427_139797209
H1_mix_00078863	chr7	+	582	3	FSM	ENSG00000059377.18	ENST00000474763.5	582	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	4.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAGCATTGCAAAGTCT	-9	True	NA	NA	False	ATTAAA	-17	NA	139778253	139797484	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_139778472_139787337_139787427_139797209
H1_mix_00078870	chr7	+	435	4	FSM	ENSG00000090266.13	ENST00000460088.5	420	4	-15	0	-15	0	multi-exon	FALSE	canonical	3	30	junction_1	1717.49455764947	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTTGTGGATCTTTTTT	-8	True	NA	31	True	ATTAAA	-36	NA	140696972	140706646	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_140697075_140702865_140703011_140704859_140704964_140706562
H1_mix_00078871	chr7	+	499	4	FSM	ENSG00000090266.13	ENST00000471136.5	499	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	1724.79100183182	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGAGTTGTGGATCTTTT	64	False	NA	29	True	ATTAAA	-34	NA	140697223	140706644	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_140697392_140702865_140703011_140704859_140704964_140706562
H1_mix_00078873	chr7	+	576	8	FSM	ENSG00000006530.18	ENST00000473884.5	568	8	-8	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	68.5928537956888	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGATCAAGGTAAATCTT	1	True	NA	NA	False	NA	NA	NA	141551409	141621790	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_141551435_141555452_141555568_141596561_141596642_141601204_141601281_141611194_141611288_141614145_141614179_141615470_141615566_141621731
H1_mix_00078876	chr7	+	1411	6	FSM	ENSG00000106028.11	ENST00000489378.5	1434	6	-7	30	0	-30	multi-exon	FALSE	canonical	3	2158	junction_1	802.653698677082	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATGCCTGGCTAATTTGT	-6	True	NA	NA	False	NA	NA	NA	141738357	141746496	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_141738411_141739123_141739191_141742168_141742230_141743560_141743702_141743901_141743990_141745495
H1_mix_00078877	chr7	+	903	7	FSM	ENSG00000106028.11	ENST00000612337.4	884	7	-19	0	-19	0	multi-exon	FALSE	canonical	3	140	junction_1	1461.28756011038	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTCGCTCTCCTTTTTGT	NA	False	NA	44	True	NA	NA	NA	141738314	141750488	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_141738594_141739123_141739191_141742168_141742230_141743560_141743702_141743901_141743990_141745495_141745585_141750310
H1_mix_00078878	chr7	+	660	7	FSM	ENSG00000106028.11	ENST00000498107.5	636	7	-24	0	0	0	multi-exon	FALSE	canonical	3	1374	junction_1	1014.1656121605	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGATGATTCTTCTTTGG	-30	True	NA	21	True	NA	NA	NA	141738333	141750354	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_141738504_141739123_141739191_141742168_141742230_141743560_141743702_141743901_141743990_141745495_141745585_141750310
H1_mix_00078879	chr7	+	701	7	FSM	ENSG00000106028.11	ENST00000265304.11	677	7	-24	0	0	0	multi-exon	FALSE	canonical	3	2158	junction_1	738.285325753006	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTCGCTCTCCTTTTTGT	-30	True	NA	44	True	NA	NA	NA	141738333	141750488	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_141738411_141739123_141739191_141742168_141742230_141743560_141743702_141743901_141743990_141745495_141745585_141750310
H1_mix_00078880	chr7	+	777	7	FSM	ENSG00000106028.11	ENST00000467681.5	630	7	0	-147	0	0	multi-exon	FALSE	canonical	3	251	junction_1	1420.73487439893	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTAATAATCTTTTTTCT	32	True	NA	17	True	ATTAAA	-19	NA	141738395	141750461	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_141738576_141739123_141739191_141742168_141742230_141743560_141743702_141743901_141743990_141745495_141745585_141750310
H1_mix_00078885	chr7	+	808	5	Fusion	ENSG00000211764.1_ENSG00000211772.11	novel	758	4	NA	NA	0	0	multi-exon	FALSE	canonical	3	131	junction_1	47.2255227604735	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTGTCTGTGGAGTTC	3	True	NA	25	True	AATAAA	-29	NA	142796364	142802748	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_+_142796415_142801040_142801428_142801943_142801962_142802104_142802212_142802502
H1_mix_00078889	chr7	+	911	7	FSM	ENSG00000197448.14	ENST00000409500.7	888	7	-23	0	-23	0	multi-exon	FALSE	canonical	2	5	junction_4	117.322087529255	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGAAGACGTCCACCATT	NA	False	NA	-91	True	NA	NA	NA	143263405	143268995	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_143263586_143264085_143264168_143264547_143264677_143264991_143265093_143267616_143267734_143268090_143268185_143268787
H1_mix_00078890	chr7	+	873	7	FSM	ENSG00000197448.14	ENST00000443571.6	850	7	-23	0	-11	0	multi-exon	FALSE	canonical	2	4	junction_2	118.4604950559	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCCCAATTCTGCTTTCC	-19	True	NA	-24	True	NA	NA	NA	143263417	143269062	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_143263586_143264085_143264168_143264991_143265093_143265260_143265297_143267616_143267734_143268090_143268185_143268787
H1_mix_00078891	chr7	+	1055	8	FSM	ENSG00000197448.14	ENST00000358406.10	1032	8	-23	0	-11	0	multi-exon	FALSE	canonical	3	280	junction_2	20.3670402005449	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGTCTGTATCTGCC	-19	True	NA	29	True	AATAAA	-23	NA	143263417	143269115	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_143263586_143264085_143264168_143264547_143264677_143264991_143265093_143265260_143265297_143267616_143267734_143268090_143268185_143268787
H1_mix_00078892	chr7	+	1200	7	FSM	ENSG00000197448.14	ENST00000479303.1	1185	7	-15	0	0	0	multi-exon	FALSE	canonical	3	280	junction_2	20.9204843793509	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGTCTGTATCTGCC	4	True	NA	29	True	AATAAA	-23	NA	143263440	143269115	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_143263586_143264085_143264168_143264547_143264677_143264991_143265297_143267616_143267734_143268090_143268185_143268787
H1_mix_00078902	chr7	+	2228	10	FSM	ENSG00000159840.16	ENST00000322764.10	2228	10	0	0	0	0	multi-exon	FALSE	canonical	3	545	junction_1	191.901659486259	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCAGTAGTCAGCTCTTT	21	True	NA	17	True	AATAAA	-22	NA	143381344	143391111	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_143381410_143381556_143381780_143382247_143382448_143382592_143382686_143382800_143383323_143388218_143388340_143388488_143388659_143388766_143388946_143389856_143389978_143390577
H1_mix_00078907	chr7	+	2588	1	FSM	ENSG00000288784.1	ENST00000486333.2	2615	1	0	27	0	-27	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTAAATAAAGATGGTTTGA	NA	False	NA	NA	False	NA	NA	NA	144183465	144186053	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_144183500_144186100
H1_mix_00078909	chr7	+	5222	3	FSM	ENSG00000244198.7	ENST00000663681.1	4894	3	0	-328	0	328	multi-exon	FALSE	canonical	3	65	junction_2	119.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACCAAAGCCTAGGTGCC	NA	False	NA	NA	False	AATAAA	-24	NA	144195596	144255444	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_144195702_144207692_144207805_144250439
H1_mix_00078910	chr7	+	2903	4	FSM	ENSG00000244198.7	ENST00000474656.5	773	4	312	-2442	73	8	multi-exon	FALSE	canonical	3	44	junction_1	45.536310297998	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTATGAGTAATATGGTA	NA	False	NA	NA	False	ATTAAA	-21	NA	144195669	144216665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_144195702_144200170_144200278_144207692_144207805_144214013
H1_mix_00078912	chr7	+	552	5	NIC	ENSG00000244198.7	novel	531	5	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	69	junction_2	86.0388720288684	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTCTGTGATATTC	NA	False	NA	NA	False	AATAAA	-18	NA	144195519	144243834	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_144195702_144207692_144207805_144239039_144239096_144239274_144239389_144243746
H1_mix_00078913	chr7	+	416	4	NIC	ENSG00000244198.7	novel	819	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	111	junction_2	85.1521514049345	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTACCCAGTCTGTGATA	NA	False	NA	NA	False	AATAAA	-15	NA	144195596	144243831	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_144195702_144207692_144207805_144239274_144239389_144243746
H1_mix_00078915	chr7	+	710	6	NIC	ENSG00000244198.7	novel	423	5	NA	NA	-70	-1	combination_of_known_splicesites	FALSE	canonical	3	46	junction_1	36.5808693171718	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTACCCAGTCTGTGAT	NA	False	NA	NA	False	AATAAA	-14	NA	144195817	144243830	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_144196058_144200170_144200278_144207692_144207805_144239042_144239096_144239274_144239389_144243746
H1_mix_00078918	chr7	+	5481	15	FSM	ENSG00000050327.15	ENST00000056217.10	5482	15	0	1	0	0	multi-exon	FALSE	canonical	3	72	junction_13	41.6993613223737	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCTTCTCAAACTCCTC	-4	True	NA	22	True	AATAAA	-19	NA	144355401	144380631	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_144355502_144362657_144365824_144366354_144366413_144366845_144366911_144367101_144367356_144371160_144371322_144371876_144372030_144372298_144372429_144372682_144372758_144373194_144373285_144374731_144374890_144375513_144375676_144377119_144377191_144378761_144378867_144379898
H1_mix_00078919	chr7	+	2456	15	NIC	ENSG00000050327.15	novel	5482	15	NA	NA	48	-7	combination_of_known_junctions	FALSE	canonical	3	15	junction_2	54.1349881202121	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGAGTATTTTCTTCTCAA	44	False	NA	15	True	AATAAA	-12	NA	144355449	144380624	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_144355502_144362657_144362854_144366354_144366413_144366845_144366911_144367101_144367356_144371160_144371322_144371876_144372030_144372298_144372429_144372682_144372758_144373194_144373285_144374731_144374890_144375513_144375676_144377119_144377191_144378761_144378867_144379898
H1_mix_00078920	chr7	+	6307	11	ISM	ENSG00000050327.15	ENST00000056217.10	5482	15	65	3781	65	-3205	intron_retention	FALSE	canonical	3	138	junction_9	19.9348940303178	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGAACATTACGCCCCAA	61	False	NA	NA	False	AAAACA	-23	NA	144355466	144376851	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_144355502_144362657_144365824_144366354_144366413_144366845_144366911_144367101_144367356_144371160_144371322_144371876_144372030_144372298_144372429_144372682_144372758_144373194_144373285_144374731
H1_mix_00078921	chr7	+	569	1	FSM	ENSG00000232391.1	ENST00000456833.1	229	1	19	-359	19	359	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAATATATTTACAT	NA	False	NA	NA	False	AATAAA	-19	NA	147167362	147167931	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_147167400_147167900
H1_mix_00078926	chr7	+	3283	22	FSM	ENSG00000055130.18	ENST00000325222.9	3147	22	-258	122	0	0	multi-exon	FALSE	canonical	3	498	junction_8	62.6037460935311	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTTTAATGTGTGAAAA	0	True	NA	4	True	NA	NA	NA	148698644	148800988	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_148699030_148729961_148730263_148753975_148754151_148756982_148757151_148759303_148759355_148759547_148759639_148760332_148760497_148766560_148766724_148767618_148767750_148783782_148783891_148783970_148784078_148786550_148786600_148786988_148787121_148788556_148788675_148789749_148789827_148790309_148790442_148792725_148792819_148797811_148797860_148797936_148798020_148798571_148798678_148799274_148799389_148800501
H1_mix_00078927	chr7	+	3054	22	FSM	ENSG00000055130.18	ENST00000602748.5	3054	22	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	124.124982730587	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTACAAGTCGCATTG	0	True	NA	9	True	AATAAA	-14	NA	148698644	148801025	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_148698764_148729961_148730263_148753975_148754151_148756982_148757151_148759303_148759355_148759547_148759639_148760332_148760497_148766560_148766724_148767618_148767750_148783782_148783891_148783970_148784078_148786550_148786600_148786988_148787121_148788556_148788675_148789749_148789827_148790309_148790442_148792725_148792819_148797811_148797860_148797936_148798020_148798571_148798678_148799274_148799389_148800501
H1_mix_00078930	chr7	+	3080	21	FSM	ENSG00000055130.18	ENST00000662132.1	3080	21	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	139.156916824138	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATGATTGTGCAAATT	-11	True	NA	2	True	AATAAA	-3	NA	148698896	148801088	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_148699030_148729961_148730263_148753975_148754151_148756982_148757151_148759547_148759639_148760332_148760497_148766560_148766724_148767618_148767750_148783782_148783891_148783970_148784078_148786550_148786600_148786988_148787121_148788556_148788675_148789749_148789827_148790309_148790442_148792725_148792819_148797811_148797860_148797936_148798020_148798571_148798678_148799274_148799389_148800501
H1_mix_00078934	chr7	+	5278	6	FSM	ENSG00000197024.9	ENST00000475153.6	5460	6	-58	240	-58	0	multi-exon	FALSE	canonical	3	214	junction_5	13.6616250863505	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATGGCCCTGCTCCTTT	266	False	NA	39	True	AATAAA	-32	NA	149147394	149182802	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_149147767_149153944_149154341_149166157_149166285_149166816_149166931_149176467_149176582_149178647
H1_mix_00078938	chr7	+	4878	7	NNC	ENSG00000204946.10	novel	4424	6	NA	NA	-316	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	9.21502396451939	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTGCGTGCGCTTGATCT	NA	False	NA	NA	False	AATAAA	-15	NA	149261854	149284988	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_149262358_149266334_149266731_149266818_149266946_149267096_149267223_149278135_149278249_149278398_149278528_149281504
H1_mix_00078939	chr7	+	2876	14	FSM	ENSG00000204946.10	ENST00000378052.5	2876	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	12.4311119526251	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCCATTCTCAATTTTAAT	166	False	NA	9	True	AATAAA	-17	NA	149262170	149297301	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_149262358_149266334_149266731_149266818_149266946_149267096_149267223_149278398_149278528_149287564_149287777_149289937_149290039_149291555_149291746_149292210_149292309_149293376_149293493_149293750_149294017_149294379_149294413_149294539_149295184_149297050
H1_mix_00078940	chr7	+	4424	6	FSM	ENSG00000204946.10	ENST00000434415.6	4424	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	7.49933330370107	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTGCGTGCGCTTGATCT	-11	True	NA	NA	False	AATAAA	-15	NA	149262195	149284988	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_149262358_149266334_149266731_149266818_149266946_149267096_149267223_149278398_149278528_149281504
H1_mix_00078942	chr7	+	5046	11	NNC	ENSG00000204946.10	novel	1929	10	NA	NA	157	0	intron_retention	FALSE	canonical	0	0	junction_7	13.2849538952907	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCCATTCTCAATTTTAAT	165	False	NA	9	True	AATAAA	-17	NA	149262371	149297301	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_149262449_149266334_149266731_149266818_149266946_149267096_149267223_149278135_149278249_149278398_149278528_149287564_149287777_149289937_149290039_149292210_149292309_149293376_149293493_149293750
H1_mix_00078944	chr7	+	3959	7	NIC	ENSG00000244560.7	novel	2804	10	NA	NA	-11	-10	intron_retention	FALSE	canonical	0	0	junction_2	11.4515889242013	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAAGTGATGCCATTCTC	NA	False	NA	0	True	AATAAA	-8	NA	149285269	149297292	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_149285697_149287564_149287777_149289937_149290039_149292210_149292309_149293376_149293493_149293750_149293843_149294379
H1_mix_00078959	chr7	+	3281	2	FSM	ENSG00000214022.12	ENST00000444957.3	2969	2	-317	5	201	0	multi-exon	FALSE	canonical	3	148	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGGCTGGGGAGTGTTA	253	False	NA	27	True	AATAAA	-16	NA	150368472	150374039	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_150368942_150371227
H1_mix_00078960	chr7	+	3285	4	FSM	ENSG00000214022.12	ENST00000397281.6	3292	4	0	7	0	-2	multi-exon	FALSE	canonical	3	40	junction_3	92.1604880388312	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGTGGCTGGGGAGTGT	136	False	NA	25	True	AATAAA	-14	NA	150368789	150374037	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_150368942_150369670_150369869_150370759_150370885_150371227
H1_mix_00078962	chr7	+	3130	3	FSM	ENSG00000214022.12	ENST00000489432.7	3130	3	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_2	41	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGGCTGGGGAGTGTTA	-4	True	NA	27	True	AATAAA	-16	NA	150368821	150374039	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_150368942_150369670_150369869_150371227
H1_mix_00078963	chr7	+	3125	3	FSM	ENSG00000214022.12	ENST00000522266.1	480	3	0	-2645	0	-2	multi-exon	FALSE	canonical	3	59	junction_1	47.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGTGGCTGGGGAGTGT	71	False	NA	25	True	AATAAA	-14	NA	150368896	150374037	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_150369014_150369670_150369869_150371227
H1_mix_00078965	chr7	+	2876	1	FSM	ENSG00000214022.12	ENST00000425389.2	2876	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGGCTGGGGAGTGTTA	1522	False	NA	27	True	AATAAA	-16	NA	150371163	150374039	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_150371200_150374000
H1_mix_00078966	chr7	+	2280	3	FSM	ENSG00000196456.13	ENST00000329630.10	2261	3	-19	0	-19	0	multi-exon	FALSE	canonical	3	111	junction_1	15	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAATGGTTTGATGTCCCT	16	False	NA	8	True	AATAAA	-15	NA	150379310	150398630	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_150379393_150388421_150388502_150396512
H1_mix_00078969	chr7	+	4666	3	NIC	ENSG00000284691.1	novel	1167	3	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_1	11.5	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTGTAAGGAGTGGTCA	7738	False	NA	17	True	AATAAA	-17	NA	150404454	150412470	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_150405905_150407583_150408489_150410159
H1_mix_00078974	chr7	+	1143	7	FSM	ENSG00000164867.11	ENST00000475017.1	1143	7	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_6	13.4660065844828	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGAACTGAAAGTGTCTT	-2	True	NA	2	True	AATAAA	-18	NA	151008936	151012065	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_151009063_151009188_151009268_151009397_151009586_151010114_151010288_151010596_151010808_151010898_151010987_151011787
H1_mix_00078975	chr7	+	1953	6	FSM	ENSG00000164867.11	ENST00000477227.1	1111	6	-9	-833	4	534	multi-exon	FALSE	canonical	3	25	junction_5	9.2217135067188	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGCCAGAAACAAGAGTCA	1387	False	NA	NA	False	NA	NA	NA	151010523	151015122	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_151010808_151010898_151010987_151012350_151012473_151013230_151013380_151013723_151013919_151014007
H1_mix_00078976	chr7	+	4672	16	FSM	ENSG00000197150.13	ENST00000358849.9	4656	16	-16	0	-3	0	multi-exon	FALSE	canonical	3	53	junction_9	9.87026961243827	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGGTATGCAGCCCTTT	NA	False	NA	7	True	AATAAA	-20	NA	151028433	151047782	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_151028611_151033604_151033918_151034272_151034429_151034504_151034600_151034723_151034830_151035580_151035743_151035881_151035968_151036072_151036171_151036543_151036650_151040267_151040302_151040497_151040635_151040827_151040923_151041098_151041233_151041960_151042109_151043970_151044222_151045208
H1_mix_00078977	chr7	+	4359	15	FSM	ENSG00000197150.13	ENST00000542328.5	4371	15	12	0	-3	0	multi-exon	FALSE	canonical	3	6	junction_1	19.7826196651588	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGGTATGCAGCCCTTT	NA	False	NA	7	True	AATAAA	-20	NA	151028433	151047782	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_151028611_151034272_151034429_151034504_151034600_151034723_151034830_151035580_151035743_151035881_151035968_151036072_151036171_151036543_151036650_151040267_151040302_151040497_151040635_151040827_151040923_151041098_151041233_151041960_151042109_151043970_151044222_151045208
H1_mix_00078978	chr7	+	1596	10	FSM	ENSG00000197150.13	ENST00000477092.5	1596	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	20.8776565545532	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGCTGTAACAGATCATC	15	False	NA	19	True	CATAAA	-29	NA	151028466	151037570	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_151028611_151033604_151033918_151034272_151034429_151034504_151034600_151034723_151034830_151035580_151035743_151035881_151035968_151036072_151036171_151036543_151036650_151037240
H1_mix_00078983	chr7	+	3883	22	FSM	ENSG00000164889.15	ENST00000392826.6	3947	22	64	0	-23	0	multi-exon	FALSE	canonical	3	28	junction_1	133.001219028393	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTATCTGTGGCCTTTTGT	-7	True	NA	6	True	AGTAAA	-15	NA	151062610	151076522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_151062664_151064201_151064368_151064525_151064768_151064847_151064967_151066516_151066762_151066850_151066994_151067873_151068055_151069946_151070083_151070180_151070347_151070456_151070572_151070726_151070912_151071071_151071298_151071389_151071606_151071688_151071838_151071941_151072137_151074038_151074294_151074398_151074489_151074674_151074842_151075254_151075509_151075605_151075776_151076012_151076187_151076286
H1_mix_00078984	chr7	+	4409	22	FSM	ENSG00000164889.15	ENST00000461735.1	4387	22	-22	0	-22	0	multi-exon	FALSE	canonical	3	23	junction_1	133.833094009494	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATCTGTGGCCTTTTGTC	-6	True	NA	7	True	AGTAAA	-16	NA	151062611	151076523	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_151063190_151064201_151064368_151064525_151064768_151064847_151064967_151066516_151066762_151066850_151066994_151067873_151068055_151069946_151070083_151070180_151070347_151070456_151070572_151070726_151070912_151071071_151071298_151071389_151071606_151071688_151071838_151071941_151072137_151074038_151074294_151074398_151074489_151074674_151074842_151075254_151075509_151075605_151075776_151076012_151076187_151076286
H1_mix_00078989	chr7	+	3494	18	FSM	ENSG00000133612.19	ENST00000397238.7	3494	18	0	0	0	0	multi-exon	TRUE	canonical	3	61	junction_11	35.7664473260241	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTTTCCCCCTTTTAC	0	True	NA	23	True	AATAAA	-17	NA	151086474	151144434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_151087073_151116792_151116852_151117094_151117183_151117370_151117457_151117635_151117778_151118209_151118345_151118504_151118633_151119986_151120146_151123793_151123887_151128579_151128685_151134399_151134569_151138142_151138314_151139978_151140117_151141897_151142053_151142162_151142254_151142411_151142635_151143340_151143597_151143736
H1_mix_00078990	chr7	+	2039	9	FSM	ENSG00000133612.19	ENST00000473312.5	2039	9	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_8	41.5374454558775	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGTGGTCTCAGTTCCTT	242	False	NA	24	True	AATAAA	-12	NA	151086741	151123635	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_151087073_151116792_151116852_151117094_151117183_151117370_151117457_151117635_151117778_151118209_151118345_151118504_151118633_151119986_151120146_151122724
H1_mix_00078991	chr7	+	3135	18	NNC	ENSG00000133612.19	novel	3494	18	NA	NA	64	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_5	43.3521031126595	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTTTCCCCCTTTTAC	306	False	NA	23	True	AATAAA	-17	NA	151086805	151144434	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_151087073_151116792_151116852_151117094_151117183_151117370_151117457_151117635_151117750_151118209_151118345_151118504_151118633_151119986_151120146_151123793_151123887_151128579_151128685_151134399_151134569_151138142_151138314_151139978_151140117_151141897_151142053_151142162_151142254_151142411_151142635_151143340_151143597_151143736
H1_mix_00078992	chr7	+	2675	9	FSM	ENSG00000133612.19	ENST00000335367.7	2675	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	57.0710905362776	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTCTCAGTTCCTTCCC	30	False	NA	27	True	AATAAA	-15	NA	151114677	151123638	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_151115642_151116792_151116852_151117094_151117183_151117370_151117457_151117635_151117778_151118209_151118345_151118504_151118633_151119986_151120146_151122724
H1_mix_00078999	chr7	+	3994	4	FSM	ENSG00000033100.17	ENST00000035307.7	3989	4	0	-5	0	5	multi-exon	FALSE	canonical	3	88	junction_2	19.3275853524323	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGGTCTAGGGAAAATTG	-16	True	NA	31	True	ATTAAA	-22	NA	151232482	151238827	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_151234275_151235047_151235613_151236407_151236591_151237373
H1_mix_00079001	chr7	+	2096	8	ISM	ENSG00000013374.17	ENST00000470229.6	3210	15	-126	17170	-86	12	5prime_fragment	FALSE	canonical	3	98	junction_1	103.511016864124	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTCTTTTTCTTTTCATT	5116	False	NA	43	True	AATAAA	-40	NA	151341685	151361261	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_151341966_151345347_151345467_151349072_151349241_151351423_151351483_151352811_151352883_151355767_151355951_151356127_151356223_151360140
H1_mix_00079002	chr7	+	3115	15	FSM	ENSG00000013374.17	ENST00000413040.7	3107	15	-8	0	-8	0	multi-exon	FALSE	canonical	3	150	junction_12	92.4201806745603	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCACCCTAATTTTGCAT	55	False	NA	16	True	AATAAA	-23	NA	151341763	151378449	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_151341847_151345347_151345467_151349072_151349241_151351423_151351483_151352811_151352883_151355767_151355951_151356127_151356223_151360140_151360248_151366938_151367126_151367860_151367969_151368734_151368888_151374096_151374202_151375847_151375944_151376633_151376812_151377046
H1_mix_00079003	chr7	+	1703	9	FSM	ENSG00000013374.17	ENST00000468404.5	1703	9	0	0	0	0	multi-exon	TRUE	canonical	3	67	junction_8	107.314301819469	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGACCAAAGAGGTTTCTT	7	True	NA	31	True	AATAAA	-28	NA	151341803	151361249	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_151341847_151345347_151345467_151349072_151349241_151351423_151351483_151352811_151352883_151355767_151355951_151356127_151356223_151360140_151360915_151361058
H1_mix_00079004	chr7	+	3218	15	FSM	ENSG00000013374.17	ENST00000470229.6	3210	15	-8	0	0	0	multi-exon	FALSE	canonical	3	24	junction_12	119.327110011403	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAAATATATTCAAAAATT	7	True	NA	-2	True	AATAAA	-5	NA	151341803	151378431	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_151341966_151345347_151345467_151349072_151349241_151351423_151351483_151352811_151352883_151355767_151355951_151356127_151356223_151360140_151360248_151366938_151367126_151367860_151367969_151368734_151368888_151374096_151374244_151375847_151375944_151376633_151376812_151377046
H1_mix_00079005	chr7	+	3117	15	FSM	ENSG00000013374.17	ENST00000568733.6	3109	15	-8	0	0	0	multi-exon	FALSE	canonical	3	24	junction_12	110.124234112095	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCACCCTAATTTTGCAT	7	True	NA	16	True	AATAAA	-23	NA	151341803	151378449	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_151341847_151345347_151345467_151349072_151349241_151351423_151351483_151352811_151352883_151355767_151355951_151356127_151356223_151360140_151360248_151366938_151367126_151367860_151367969_151368734_151368888_151374096_151374244_151375847_151375944_151376633_151376812_151377046
H1_mix_00079006	chr7	+	1941	8	ISM	ENSG00000013374.17	ENST00000468404.5	1703	9	-94	0	-62	0	intron_retention	FALSE	canonical	3	312	junction_1	32.7326835353989	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGACCAAAGAGGTTTCTT	1	True	NA	31	True	AATAAA	-28	NA	151341709	151361249	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_151341847_151345347_151345467_151349072_151349241_151351423_151351483_151352811_151352883_151355767_151355951_151356127_151356223_151360140
H1_mix_00079014	chr7	+	2356	4	FSM	ENSG00000178234.13	ENST00000422997.6	2371	4	12	3	12	-3	multi-exon	FALSE	canonical	3	25	junction_1	120.258055863214	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTTTCTTTGTTATCAA	290	False	NA	21	True	AATAAA	-28	NA	152079286	152104888	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_152079409_152094189_152094523_152100797_152100922_152103111
H1_mix_00079015	chr7	+	750	1	FSM	ENSG00000241007.1	ENST00000469999.1	1143	1	733	-340	733	340	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGACTGTGGAAGGTTA	NA	False	NA	NA	False	NA	NA	NA	152368251	152369001	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_152368300_152369000
H1_mix_00079016	chr7	+	1487	1	FSM	ENSG00000261455.1	ENST00000564834.1	1764	1	273	4	273	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACAGACGTATGTTTTTT	NA	False	NA	8	True	AATAAA	-19	NA	152464058	152465545	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_152464100_152465500
H1_mix_00079019	chr7	+	2205	12	NNC	ENSG00000133627.18	novel	2213	12	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_6	99.8099019583008	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTCTGCTGTAGTGTGG	-27	True	NA	16	True	AATAAA	-23	NA	152759752	152855375	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_152759927_152783186_152783243_152800530_152800656_152801620_152801732_152814549_152814646_152816480_152816589_152820302_152820443_152823341_152823516_152825029_152825123_152852125_152852252_152853493_152853578_152854457
H1_mix_00079020	chr7	+	1692	11	FSM	ENSG00000133627.18	ENST00000397282.2	1692	11	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	64.1697748164975	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGTAAATAAAATGTTTAAA	8	True	NA	-17	True	NA	NA	NA	152759787	152854949	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_152759927_152800530_152800656_152801620_152801732_152814549_152814646_152816480_152816589_152820298_152820443_152823341_152823516_152825029_152825123_152852125_152852252_152853493_152853578_152854457
H1_mix_00079021	chr7	+	2066	12	NNC	ENSG00000133627.18	novel	2213	12	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_7	90.5593271592562	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGCTGTAGTGTGGT	22	True	NA	17	True	AATAAA	-24	NA	152759801	152855376	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_152759927_152783186_152783243_152800530_152800656_152801620_152801732_152814549_152814646_152816480_152816589_152820298_152820348_152823341_152823516_152825029_152825123_152852125_152852252_152853493_152853578_152854457
H1_mix_00079022	chr7	+	4167	25	ISM	ENSG00000130226.17	ENST00000332007.7	3768	26	141097	-834	140765	0	3prime_fragment	TRUE	canonical	3	12	junction_13	5.78296708734654	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGATTGTTCCTTTCTTG	NA	False	NA	35	True	AATAAA	-15	NA	154446206	154894285	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_154446329_154474938_154475038_154540531_154540627_154566841_154566917_154637820_154637874_154669359_154669442_154727766_154727888_154769416_154769572_154772844_154772943_154794078_154794203_154795844_154795884_154801354_154801463_154803863_154803956_154804916_154804965_154806993_154807113_154853779_154853828_154867994_154868094_154872623_154872694_154875905_154876101_154880887_154880943_154885632_154885745_154887675_154887735_154889271_154889345_154889456_154889531_154892333
H1_mix_00079026	chr7	+	592	2	FSM	ENSG00000186480.13	ENST00000425172.1	596	2	4	0	4	0	multi-exon	FALSE	canonical	3	54	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGCCTGGTGGGTCCCT	863	False	NA	NA	False	NA	NA	NA	155297832	155298655	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_155298028_155298258
H1_mix_00079027	chr7	+	2908	6	FSM	ENSG00000186480.13	ENST00000340368.9	2908	6	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_5	25.4950975679639	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTATTTATGTTTGCT	0	True	NA	17	True	ATTAAA	-14	NA	155297877	155310235	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_155297960_155298258_155298698_155301565_155301691_155302250_155302418_155302746_155302847_155308240
H1_mix_00079028	chr7	+	1320	6	FSM	ENSG00000186480.13	ENST00000476756.1	1320	6	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_5	180.156154488266	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTCCCACACTGCGATATA	116	False	NA	NA	False	AATGAA	-8	NA	155298560	155308960	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_155298698_155301565_155301691_155302250_155302418_155302746_155302847_155303824_155303896_155308240
H1_mix_00079038	chr7	+	1372	6	ISM	ENSG00000146909.8	ENST00000275820.4	6082	11	737	9829	737	-5	5prime_fragment	FALSE	canonical	3	60	junction_1	9.95991967839099	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCATTTCTGTTGTATCT	725	False	NA	11	True	NA	NA	NA	156950448	156963347	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_156950725_156952473_156952599_156954102_156954299_156959850_156960175_156962150_156962262_156963007
H1_mix_00079041	chr7	+	5214	23	FSM	ENSG00000009335.18	ENST00000348165.10	5214	23	0	0	0	0	multi-exon	FALSE	canonical	2	140	junction_10	26.9762675006099	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGTTGGAGTCCTACC	-21	True	NA	16	True	ATTAAA	-16	NA	157138925	157269370	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_157139339_157163809_157163864_157169047_157169123_157170303_157170451_157174918_157175035_157178689_157178848_157181517_157181672_157182107_157182329_157183877_157184030_157186833_157187022_157201720_157201808_157207397_157207556_157207702_157207936_157216866_157216972_157220688_157220777_157223253_157223352_157225406_157225540_157231079_157231328_157248367_157248581_157253953_157254143_157254243_157254311_157256913_157257045_157267584
H1_mix_00079042	chr7	+	2313	7	FSM	ENSG00000105993.15	ENST00000443280.5	1159	7	-126	-1028	-67	64	multi-exon	FALSE	canonical	3	63	junction_5	1214.09467871698	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTCTTCAACATTACGAT	NA	False	NA	NA	False	AATAAA	-3	NA	157336898	157417503	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_157337145_157358546_157358638_157363160_157363271_157366501_157366562_157367372_157367484_157409794_157410002_157416015
H1_mix_00079043	chr7	+	1609	8	FSM	ENSG00000105993.15	ENST00000429029.6	1609	8	0	0	0	0	multi-exon	FALSE	canonical	3	2671	junction_7	213.986553077429	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTTGTGTCTGTGTAT	0	True	NA	25	True	AATAAA	-41	NA	157336965	157386324	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_157337145_157358546_157358638_157363160_157363271_157366501_157366562_157367372_157367484_157382245_157382378_157384866_157385009_157385540
H1_mix_00079044	chr7	+	2521	10	FSM	ENSG00000105993.15	ENST00000262177.9	2489	10	-38	6	0	0	multi-exon	FALSE	canonical	3	1474	junction_9	681.616868596689	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACAGCTCGCCTGCTGTC	0	True	NA	104	True	AATAAA	-15	NA	157336965	157417433	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_157337145_157358546_157358638_157363160_157363271_157366501_157366562_157367372_157367484_157382245_157382378_157384866_157385009_157385540_157385612_157409794_157410002_157416015
H1_mix_00079046	chr7	+	8011	10	FSM	ENSG00000105993.15	ENST00000459889.5	7992	10	-19	0	0	0	multi-exon	FALSE	canonical	3	48	junction_9	1027.13230181515	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACAGCTCGCCTGCTGTC	-6	True	NA	104	True	AATAAA	-15	NA	157337003	157417433	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_157337145_157358546_157358638_157363160_157363271_157366501_157366562_157367372_157367484_157382245_157382378_157384866_157385009_157385540_157385612_157409794_157415530_157416015
H1_mix_00079050	chr7	-	3583	3	FSM	ENSG00000242474.3	ENST00000665089.1	2091	3	0	-1492	0	0	multi-exon	FALSE	canonical	3	17	junction_1	26.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGCTGTCATTTCAGGT	NA	False	NA	-16	True	AATAAA	-13	NA	149428	144443	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_147840_148531_148619_149328
H1_mix_00079051	chr7	-	1197	3	FSM	ENSG00000242474.3	ENST00000659412.1	1201	3	0	4	0	0	multi-exon	FALSE	canonical	3	15	junction_1	27.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGCTGTCATTTCAGGT	NA	False	NA	-16	True	AATAAA	-13	NA	149466	144443	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_145416_148531_148619_149328
H1_mix_00079052	chr7	-	3031	2	FSM	ENSG00000242474.3	ENST00000655278.1	3031	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATATACTTTAAAAGCAA	NA	False	NA	NA	False	AATAGA	-13	NA	149527	145786	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_148619_149328
H1_mix_00079053	chr7	-	3322	6	FSM	ENSG00000197461.13	ENST00000402802.7	2305	6	-238	-779	-238	779	multi-exon	FALSE	canonical	3	12	junction_2	1.46969384566991	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCCATTAAAGTGATGG	1041	False	NA	3	True	TATAAA	-18	NA	519647	496478	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_498575_501115_501243_510808_510997_512350_512456_517393_517491_518938
H1_mix_00079054	chr7	-	2525	11	FSM	ENSG00000188191.15	ENST00000406797.5	2553	11	45	-17	45	16	multi-exon	FALSE	canonical	3	12	junction_10	145.287473651378	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCTTGGTCTGAAGTCTT	49	False	NA	-25	True	ATTAAA	-32	NA	713162	549180	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_550603_551388_551471_579255_579378_584507_584569_596145_596305_606192_606240_607390_607453_677228_677321_680555_680727_711328_711528_713054
H1_mix_00079055	chr7	-	2502	11	FSM	ENSG00000188191.15	ENST00000537384.6	2472	11	0	-30	0	29	multi-exon	FALSE	canonical	3	74	junction_10	128.116392393792	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCTTTTGTAGATAAGGG	3	True	NA	-12	True	ATTAAA	-45	NA	727281	549167	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_550603_551388_551471_579255_579378_584507_584569_596145_596305_606192_606240_607390_607453_677228_677321_680555_680727_711328_711528_727209
H1_mix_00079057	chr7	-	1917	11	FSM	ENSG00000188191.15	ENST00000403562.5	1917	11	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_10	71.0113371230256	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAGACCCCAGTAGGGGG	-9	True	NA	NA	False	GGGGCT	-30	NA	727650	549741	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_550603_551388_551471_579255_579378_584507_584569_596145_596305_606192_606240_607390_607453_677228_677321_680555_680727_711328_711528_727589
H1_mix_00079059	chr7	-	292	2	NIC	ENSG00000188191.15	novel	602	2	NA	NA	2	5	combination_of_known_splicesites	FALSE	canonical	3	48	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATACTTGGTGCTTTTGA	-7	True	NA	2	True	AATAAA	-22	NA	727648	716613	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_716847_727589
H1_mix_00079060	chr7	-	6274	1	FSM	ENSG00000273151.1	ENST00000609998.1	6758	1	415	69	415	-69	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGCCATTTGGGAGCTGCT	NA	False	NA	NA	False	NA	NA	NA	886132	879858	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_879900_886100
H1_mix_00079062	chr7	-	2351	11	FSM	ENSG00000105963.15	ENST00000265846.10	2349	11	0	-2	0	2	multi-exon	FALSE	canonical	3	28	junction_10	6.54293512118224	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTCCGAGGATGGAGT	-1	True	NA	0	True	AATAAA	-25	NA	954680	897897	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_898950_899032_899262_899418_899491_900101_900165_900532_900617_904125_904273_905059_905173_919967_920051_926552_926645_935374_935506_954395
H1_mix_00079063	chr7	-	4846	3	FSM	ENSG00000240230.6	ENST00000344111.4	4839	3	0	-7	0	7	multi-exon	FALSE	canonical	3	179	junction_1	14	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTTTTCCAAGCGTTCCC	-11	True	NA	2	True	ATTAAA	-24	NA	975549	964844	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_969457_973180_973293_975427
H1_mix_00079064	chr7	-	1303	5	FSM	ENSG00000146540.15	ENST00000357429.10	1294	5	0	-9	0	9	multi-exon	FALSE	canonical	3	583	junction_4	271.541318218793	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCTGTGGACTGCGGA	12	True	NA	-7	True	NA	NA	NA	1138257	996976	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_997805_1000469_1000552_1009949_1010144_1127256_1127387_1138188
H1_mix_00079065	chr7	-	1274	5	FSM	ENSG00000146540.15	ENST00000397100.6	1264	5	0	-10	0	9	multi-exon	FALSE	canonical	3	94	junction_4	461.130404549516	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCTGTGGACTGCGGA	12	True	NA	-7	True	NA	NA	NA	1138257	996976	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_997805_1000469_1000552_1009949_1010144_1127256_1127387_1138217
H1_mix_00079066	chr7	-	1147	4	FSM	ENSG00000146540.15	ENST00000412051.5	1147	4	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_3	455.621431551336	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCAGCAGCCGTGGGTC	18	True	NA	-46	True	AATAAA	-7	NA	1028339	997015	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_997805_1000469_1000552_1009949_1010144_1028257
H1_mix_00079068	chr7	-	2035	5	FSM	ENSG00000146540.15	ENST00000397098.8	2138	5	123	-20	123	0	multi-exon	FALSE	canonical	3	35	junction_4	485.245491993486	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGTGCGTCCCCTGCCTGTG	145	False	NA	-16	True	AATAAA	-37	NA	1138124	996985	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_997805_1000469_1000552_1009949_1010144_1127256_1127387_1137314
H1_mix_00079070	chr7	-	2644	2	FSM	ENSG00000146540.15	ENST00000465681.1	2621	2	0	-23	0	23	multi-exon	FALSE	canonical	3	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGGCTTCTGCGTCTCT	5	True	NA	1	True	AAAAAG	-45	NA	1028352	1024478	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_1027028_1028257
H1_mix_00079071	chr7	-	883	5	FSM	ENSG00000178381.12	ENST00000316495.8	878	5	0	-5	0	4	multi-exon	FALSE	canonical	3	138	junction_1	10.3077640640442	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTCTCATTGCCCACTG	-22	True	NA	1	True	AATAAA	-24	NA	1160196	1152901	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_1153225_1155452_1155585_1157655_1157751_1158157_1158258_1159963
H1_mix_00079074	chr7	-	3096	17	FSM	ENSG00000164877.19	ENST00000297508.8	3096	17	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_13	7.0267346612776	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTACGTGCCTCCGTGTT	-1	True	NA	0	True	AATAAA	-24	NA	1459470	1434358	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_1434673_1435100_1435148_1436741_1436857_1437534_1437609_1437889_1437981_1438096_1438221_1438288_1438354_1438839_1438996_1439924_1440086_1440590_1440685_1442191_1442485_1444651_1445429_1446712_1446829_1447574_1447766_1448619_1448762_1450239_1450289_1459183
H1_mix_00079076	chr7	-	2561	1	FSM	ENSG00000273230.1	ENST00000609755.1	3026	1	472	-7	472	7	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGACATGCCTAGCAAAGCC	9838	False	NA	-10	True	AATAAA	-23	NA	1467050	1464489	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_1464500_1467000
H1_mix_00079077	chr7	-	6981	48	FSM	ENSG00000164880.16	ENST00000404767.8	6981	48	0	0	0	0	multi-exon	TRUE	canonical	2	243	junction_47	85.0503272840155	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTCTCTGGTGTCCC	-18	True	NA	-6	True	AATGAA	-16	NA	1504389	1470276	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_1470693_1470845_1470956_1471132_1471225_1471570_1471642_1472272_1472387_1473071_1473185_1473565_1473694_1474167_1474361_1474704_1474839_1475947_1476072_1476228_1476456_1476569_1476658_1476793_1476919_1477549_1477674_1477752_1477937_1478365_1478507_1478725_1478886_1479429_1479685_1480316_1480442_1480834_1480934_1481341_1481489_1482545_1482708_1483741_1483854_1484002_1484171_1485097_1485203_1485289_1485470_1486624_1486775_1486921_1487102_1487319_1487450_1487759_1487958_1489343_1489405_1489590_1489683_1493009_1493107_1493753_1493912_1494815_1494894_1495432_1495554_1496155_1496265_1497137_1497315_1498411_1498554_1498706_1498853_1498974_1499162_1499254_1499361_1499472_1499633_1499883_1500022_1500169_1500367_1502900_1503192_1503902_1504002_1504322
H1_mix_00079078	chr7	-	3051	12	FSM	ENSG00000164880.16	ENST00000468115.1	3051	12	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_8	28.5576117713412	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGAGAAAGTGGTCTG	NA	False	NA	NA	False	NA	NA	NA	1493867	1482277	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_1483854_1484002_1484171_1485097_1485203_1485289_1485470_1486624_1486775_1486921_1487102_1487319_1487450_1487759_1487958_1489343_1489405_1489590_1489683_1493009_1493107_1493753
H1_mix_00079080	chr7	-	2843	6	FSM	ENSG00000164855.16	ENST00000468535.5	2843	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	2.13541565040626	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCGGGTCTTGGCTTCTGT	9888	False	NA	-1	True	TTTAAA	-15	NA	1550930	1546228	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_1547182_1547741_1547940_1548518_1549946_1550122_1550199_1550304_1550380_1550816
H1_mix_00079081	chr7	-	1428	2	FSM	ENSG00000157778.9	ENST00000288607.3	1428	2	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCACTGTCCTCCTTAA	-28	True	NA	-3	True	ATTAAA	-21	NA	1570032	1567331	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_1567851_1569123
H1_mix_00079082	chr7	-	937	3	NNC	ENSG00000157778.9	novel	774	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	152	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGAATGTGTATCCCAAAAT	-41	True	NA	-22	True	ATTAAA	-2	NA	1570045	1567350	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_1567851_1569123_1569361_1569845
H1_mix_00079083	chr7	-	774	3	FSM	ENSG00000157778.9	ENST00000404674.7	774	3	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	111	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGAATGTGTATCCCAAAAT	-41	True	NA	-22	True	ATTAAA	-2	NA	1570045	1567350	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_1567851_1569123_1569361_1570008
H1_mix_00079084	chr7	-	298	1	FSM	ENSG00000205971.3	ENST00000620671.1	923	1	902	-277	902	37	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGACCCTAGGTCACAC	NA	False	NA	NA	False	AATAGA	-18	NA	1693070	1692772	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_1692800_1693100
H1_mix_00079085	chr7	-	1518	10	NNC	ENSG00000002822.16	novel	2695	19	NA	NA	16239	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	78.7947795475729	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCCCACTCGCCCTGTGT	NA	False	NA	-11	True	AATAAA	-16	NA	2159146	1815794	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_1816229_1898199_1898391_1936686_1936898_1957628_1957720_1980452_1980542_2002064_2002122_2014501_2014643_2069193_2069339_2149151_2149239_2159074
H1_mix_00079086	chr7	-	2711	19	FSM	ENSG00000002822.16	ENST00000265854.12	2695	19	0	-16	0	14	multi-exon	FALSE	canonical	3	161	junction_18	27.0724337041698	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTATCTGTGGCCTAGCCC	-3	True	NA	5	True	AATAAA	-32	NA	2232945	1815778	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_1816229_1898199_1898391_1936686_1936898_1957628_1957720_1980452_1980542_2002064_2002122_2014501_2014643_2069193_2069339_2149151_2149239_2213211_2213274_2215884_2216000_2216156_2216288_2217961_2218044_2219331_2219457_2222574_2222755_2225409_2225551_2229983_2230144_2230548_2230728_2232871
H1_mix_00079087	chr7	-	2777	19	FSM	ENSG00000002822.16	ENST00000399654.6	2762	19	0	-15	0	14	multi-exon	FALSE	canonical	3	26	junction_18	52.6940856896357	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTATCTGTGGCCTAGCCC	9218	False	NA	5	True	AATAAA	-32	NA	2232974	1815778	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_1816229_1898199_1898391_1936686_1936898_1957628_1957720_1980452_1980542_2002064_2002122_2014501_2014643_2069193_2069339_2149151_2149239_2213211_2213274_2215884_2216000_2216156_2216288_2217961_2218044_2219331_2219457_2222574_2222755_2225409_2225551_2229983_2230144_2230548_2230765_2232871
H1_mix_00079088	chr7	-	1704	3	FSM	ENSG00000122687.19	ENST00000242257.14	1704	3	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_2	92.5	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCATGCTTTGAAGTTTT	-13	True	NA	-5	True	AATAAA	-29	NA	2242205	2234194	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_2235565_2239417_2239708_2242161
H1_mix_00079089	chr7	-	1819	3	FSM	ENSG00000122687.19	ENST00000467199.5	1819	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	165.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAATAAAATAATAGAGATT	23	True	NA	-41	True	NA	NA	NA	2242169	2234230	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_2235565_2239417_2239708_2241974
H1_mix_00079090	chr7	-	1612	3	NNC	ENSG00000122687.19	novel	1704	3	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_2	150.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAATAAAATAATAGAGATT	12	True	NA	-41	True	NA	NA	NA	2242180	2234230	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_2235565_2239417_2239677_2242161
H1_mix_00079091	chr7	-	1537	3	NNC	ENSG00000122687.19	novel	1704	3	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_1	67	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAATAAAATAATAGAGATT	6	True	NA	-41	True	NA	NA	NA	2242186	2234230	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_2235565_2239529_2239708_2242161
H1_mix_00079092	chr7	-	2511	4	FSM	ENSG00000122687.19	ENST00000486040.1	2511	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	65.4539702556096	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCAGTGATGTGGTGTG	3	True	NA	-22	True	CATAAA	-14	NA	2242189	2234294	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_2235565_2238014_2238938_2239417_2239708_2242161
H1_mix_00079093	chr7	-	4704	11	FSM	ENSG00000106266.11	ENST00000222990.8	4704	11	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_6	19.3051806518354	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAACGTGTATGAAAGTTG	-33	True	NA	NA	False	AATAAA	-20	NA	2314441	2251769	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_2255170_2256873_2257024_2257364_2257515_2257734_2257804_2263229_2263363_2264297_2264459_2269558_2269640_2271849_2271972_2275111_2275230_2278099_2278306_2314327
H1_mix_00079094	chr7	-	223	2	NNC	ENSG00000106266.11	novel	583	4	NA	NA	244	-59012	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCACAGTGGTGTGACCCT	-5	True	NA	-4	True	ATTAAA	-15	NA	2354065	2337125	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_2337280_2353996
H1_mix_00079095	chr7	-	235	2	NNC	ENSG00000106266.11	novel	583	4	NA	NA	1274	-59017	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTACGCACAGTGGTGTG	2557	False	NA	-9	True	ATTAAA	-10	NA	2353035	2337130	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_2337282_2352951
H1_mix_00079096	chr7	-	2788	14	FSM	ENSG00000106009.16	ENST00000340611.9	2779	14	0	-9	0	9	multi-exon	TRUE	canonical	3	528	junction_13	96.0347570216795	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCATTCGCATGTGGATA	-11	True	NA	9	True	NA	NA	NA	2555524	2537800	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_2538765_2539178_2539352_2539543_2539643_2539785_2539889_2540978_2541053_2541297_2541485_2541717_2541837_2542119_2542212_2543203_2543324_2543589_2543963_2544908_2545057_2547323_2547479_2554304_2554448_2555486
H1_mix_00079099	chr7	-	4440	10	FSM	ENSG00000106009.16	ENST00000467558.5	4440	10	0	0	0	0	multi-exon	FALSE	canonical	3	644	junction_8	60.7102000907733	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAATGGCATTGAAGT	1267	False	NA	-33	True	ATTAAA	-21	NA	2554447	2537880	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_2539352_2539543_2539643_2539785_2541053_2541297_2541485_2541717_2541837_2542119_2542212_2543203_2543963_2544908_2545057_2547323_2547479_2554304
H1_mix_00079100	chr7	-	5226	11	FSM	ENSG00000106009.16	ENST00000469750.5	5226	11	0	0	0	0	multi-exon	FALSE	canonical	3	528	junction_10	81.5943625503625	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAATGGCATTGAAGT	20	False	NA	-33	True	ATTAAA	-21	NA	2555694	2537880	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_2538765_2539178_2539352_2539543_2539643_2539785_2541053_2541297_2541485_2541717_2541837_2542119_2543963_2544908_2545057_2547323_2547479_2554304_2554448_2555486
H1_mix_00079102	chr7	-	4369	4	FSM	ENSG00000146535.14	ENST00000275364.8	4369	4	0	0	0	0	multi-exon	FALSE	canonical	3	779	junction_1	7.71722460186015	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTGCCAGTATTCAAAACC	18	True	NA	NA	False	AATAAA	-28	NA	2844308	2728104	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_2731751_2733450_2733502_2794927_2795144_2843852
H1_mix_00079103	chr7	-	1203	3	FSM	ENSG00000146535.14	ENST00000471281.5	1205	3	2	0	2	0	multi-exon	FALSE	canonical	1	7	junction_2	386	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTAGGCAAAAGGACATGG	NA	False	NA	NA	False	NA	NA	NA	2795143	2731022	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_2731751_2733450_2733502_2794719
H1_mix_00079104	chr7	-	5567	25	FSM	ENSG00000198286.10	ENST00000396946.9	4287	25	22	-1302	0	1302	multi-exon	FALSE	canonical	3	49	junction_13	9.4537433796824	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTGGCCTGTAGCAT	11	True	NA	NA	False	AATAAA	-40	NA	3043845	2904839	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_2906843_2910049_2910166_2912171_2912297_2913286_2913467_2915236_2915373_2917289_2917386_2918490_2918588_2919371_2919613_2922633_2922761_2923131_2923334_2924232_2924366_2926738_2926792_2928597_2928699_2929991_2930075_2932534_2932587_2934452_2934630_2937036_2937235_2937906_2938033_2938678_2938832_2939748_2939929_2944211_2944538_2945818_2945957_2947574_2947788_2958499_2958632_3043666
H1_mix_00079105	chr7	-	5586	25	NIC	ENSG00000198286.10	novel	4287	25	NA	NA	0	1302	combination_of_known_junctions	FALSE	canonical	3	21	junction_13	12.6589203287203	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTGGCCTGTAGCAT	-11	True	NA	NA	False	AATAAA	-40	NA	3043867	2904839	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_2906843_2910049_2910166_2912171_2912297_2913286_2913467_2915236_2915373_2917289_2917386_2918490_2918588_2919371_2919613_2922633_2922761_2923131_2923334_2924232_2924366_2926738_2926792_2928597_2928696_2929991_2930075_2932534_2932587_2934452_2934630_2937036_2937235_2937906_2938033_2938678_2938832_2939748_2939929_2944211_2944538_2945818_2945957_2947574_2947788_2958499_2958632_3043666
H1_mix_00079106	chr7	-	815	7	FSM	ENSG00000198286.10	ENST00000355508.3	815	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	20.3613195381177	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGTCCGTGACACCATGT	NA	False	NA	NA	False	NA	NA	NA	2930060	2919479	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_2919613_2922633_2922761_2923131_2923334_2924232_2924366_2926738_2926792_2928597_2928696_2929991
H1_mix_00079107	chr7	-	5731	15	FSM	ENSG00000157927.17	ENST00000399583.4	5736	15	5	0	5	0	multi-exon	TRUE	canonical	3	61	junction_5	9.7321264744292	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACACTTCTTATGGGTGTT	-5	True	NA	NA	False	NA	NA	NA	4883711	4797054	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_4799484_4799629_4799770_4800170_4800311_4801652_4801996_4803545_4803755_4805565_4805717_4815277_4815451_4816227_4816466_4817238_4817352_4822393_4822555_4832140_4832179_4834606_4835240_4836357_4836606_4877604_4878204_4883595
H1_mix_00079108	chr7	-	3623	15	NNC	ENSG00000157927.17	novel	5736	15	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	19.5630847698998	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGGTGCCCTGCTGGGGTC	15	True	NA	-7	True	AATAAA	-19	NA	4883691	4799104	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_4799484_4799667_4799770_4800170_4800311_4801652_4801996_4803545_4803755_4805565_4805717_4815277_4815451_4816227_4816466_4817238_4817352_4822393_4822555_4832140_4832179_4834606_4835240_4836357_4836606_4877604_4878204_4883595
H1_mix_00079109	chr7	-	10620	30	FSM	ENSG00000182095.15	ENST00000430969.6	10839	30	219	0	-69	0	multi-exon	TRUE	canonical	0	0	junction_23	10.5866000151651	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATTTAATTGGAAAAATAAA	4477	False	NA	72	True	CATAAA	-12	NA	5423615	5306810	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_5308313_5308874_5308950_5309131_5309369_5312502_5313864_5314983_5315149_5315955_5316073_5320317_5320427_5320531_5320608_5321072_5321191_5324213_5324356_5325095_5325249_5332621_5333050_5345561_5345811_5351818_5352095_5356915_5357277_5359397_5359570_5361593_5361723_5361896_5362034_5362649_5362826_5370374_5371365_5374054_5374485_5376033_5376225_5376846_5376994_5377370_5377577_5377921_5378025_5387671_5389337_5390484_5390629_5394439_5394596_5421059_5421490_5423440
H1_mix_00079110	chr7	-	1860	8	NNC	ENSG00000075624.17	novel	1845	7	NA	NA	0	62681	intron_retention	FALSE	non_canonical	0	0	junction_1	14046.0128353718	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	0	True	NA	NA	False	NA	NA	NA	5530600	5463727	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_5463758_5516365_5516388_5527150_5527892_5528003_5528186_5528280_5528720_5529160_5529401_5529534_5529664_5530523
H1_mix_00079111	chr7	-	1862	8	NNC	ENSG00000075624.17	novel	1845	7	NA	NA	0	62681	intron_retention	FALSE	non_canonical	0	0	junction_1	14046.0128353718	1511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	-1	True	NA	NA	False	NA	NA	NA	5530601	5463727	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_5463759_5516365_5516388_5527150_5527892_5528003_5528186_5528280_5528720_5529160_5529401_5529534_5529664_5530523
H1_mix_00079112	chr7	-	8259	5	FSM	ENSG00000155034.20	ENST00000382368.8	8270	5	11	0	11	0	multi-exon	FALSE	canonical	3	37	junction_1	12.1860576069539	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCGGCTGTGTGGTCCTTCC	-22	True	NA	-1	True	AATAAA	-23	NA	5513798	5475796	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_5481932_5491230_5491450_5500487_5502032_5505411_5505631_5513656
H1_mix_00079113	chr7	-	1867	8	Fusion	ENSG00000155034.20_ENSG00000075624.17	novel	1845	7	NA	NA	0	-75	intron_retention	FALSE	non_canonical	0	0	junction_1	14046.0128353718	876	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACACTTTGGGAGGATCA	807	False	NA	NA	False	AATATA	-20	NA	5530583	5480525	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_-_5480580_5516365_5516388_5527150_5527892_5528003_5528186_5528280_5528720_5529160_5529401_5529534_5529664_5530523
H1_mix_00079114	chr7	-	1865	8	Fusion	ENSG00000155034.20_ENSG00000075624.17	novel	1845	7	NA	NA	0	-75	intron_retention	FALSE	non_canonical	0	0	junction_1	14046.0128353718	107	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACACTTTGGGAGGATCA	807	False	NA	NA	False	AATATA	-20	NA	5530583	5480525	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_-_5480578_5516365_5516388_5527150_5527892_5528003_5528186_5528280_5528720_5529160_5529401_5529534_5529664_5530523
H1_mix_00079115	chr7	-	2687	3	FSM	ENSG00000155034.20	ENST00000458142.1	2686	3	0	-1	0	1	multi-exon	FALSE	canonical	2	9	junction_1	27.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGTCCTCACGGCTCTC	NA	False	NA	1	True	AATAAA	-21	NA	5501919	5489176	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_5490213_5491230_5491450_5500487
H1_mix_00079116	chr7	-	2021	5	FSM	ENSG00000075624.17	ENST00000642480.2	2021	5	0	0	0	0	multi-exon	FALSE	canonical	3	31405	junction_2	243.644720853952	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAGTGTGACTTTGTGGT	-3	True	NA	-3	True	AATAAA	-22	NA	5529949	5527146	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_5527892_5528003_5528186_5528280_5528720_5529160_5529401_5529534
H1_mix_00079117	chr7	-	1687	5	FSM	ENSG00000075624.17	ENST00000473257.3	1687	5	0	0	0	0	multi-exon	FALSE	canonical	1	236	junction_4	13567.2290349762	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAGTGTGACTTTGTGGT	786	False	NA	-3	True	AATAAA	-22	NA	5530604	5527146	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_5527892_5528003_5528186_5528280_5528720_5529160_5529401_5530523
H1_mix_00079118	chr7	-	1812	6	FSM	ENSG00000075624.17	ENST00000646664.1	1812	6	0	0	0	0	multi-exon	FALSE	canonical	3	28182	junction_5	1415.47594822378	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAAGTGTGACTTTGTGG	-1	True	NA	-4	True	AATAAA	-21	NA	5530601	5527147	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_5527892_5528003_5528186_5528280_5528720_5529160_5529401_5529534_5529664_5530523
H1_mix_00079119	chr7	-	2245	5	FSM	ENSG00000075624.17	ENST00000462494.5	2245	5	0	0	0	0	multi-exon	FALSE	canonical	3	28182	junction_4	1514.40307959935	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGAGGCCAAGTGTGA	-1	True	NA	-12	True	AATAAA	-13	NA	5530601	5527155	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_5527892_5528003_5528186_5528280_5529401_5529534_5529664_5530523
H1_mix_00079120	chr7	-	1845	7	FSM	ENSG00000075624.17	ENST00000425660.5	1845	7	0	0	0	0	multi-exon	FALSE	canonical	2	32	junction_4	14377.5667389629	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGAGGCCAAGTGTGA	-1	True	NA	-12	True	AATAAA	-13	NA	5530601	5527155	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_5527892_5528003_5528186_5528280_5528720_5529018_5529060_5529160_5529401_5529534_5529664_5530523
H1_mix_00079125	chr7	-	610	2	NIC	ENSG00000075624.17	novel	425	2	NA	NA	11	268	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCTACTTAAACCTTTAC	NA	False	NA	-36	True	AGTAAA	-10	NA	5562817	5561583	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_5561950_5562573
H1_mix_00079126	chr7	-	5803	18	NNC	ENSG00000011275.19	novel	5777	17	NA	NA	0	8947	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	68.7677501464721	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTCCAGAGGGGTGT	22	False	5781685	NA	False	NA	NA	NA	5781663	5611099	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_5611128_5620048_5623180_5624055_5624126_5641153_5641377_5652412_5652511_5711760_5711840_5712714_5712864_5715052_5715191_5716715_5716767_5721032_5721173_5725323_5725439_5729431_5729597_5730714_5730818_5739275_5739353_5740972_5741816_5752845_5752980_5761002_5761139_5781540
H1_mix_00079128	chr7	-	5632	18	NNC	ENSG00000011275.19	novel	5777	17	NA	NA	0	8772	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	64.7797439398574	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGCCGGGCATGGTGGTG	22	False	5781685	NA	False	NA	NA	NA	5781663	5611274	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_5611302_5620047_5623180_5624055_5624126_5641153_5641377_5652412_5652511_5711760_5711840_5712714_5712864_5715052_5715191_5716715_5716767_5721032_5721173_5725323_5725439_5729431_5729597_5730714_5730818_5739275_5739353_5740972_5741645_5752845_5752980_5761002_5761139_5781540
H1_mix_00079129	chr7	-	5783	17	FSM	ENSG00000011275.19	ENST00000389902.8	5777	17	0	-6	0	6	multi-exon	FALSE	canonical	2	84	junction_14	49.5334088646239	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCGTCTCTCCACCCCGC	22	False	5781685	-2	True	AATAAA	-25	NA	5781663	5620040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_5623180_5624055_5624126_5641153_5641377_5652412_5652511_5711760_5711840_5712714_5712864_5715052_5715191_5716715_5716767_5721032_5721173_5725323_5725439_5729431_5729597_5730714_5730818_5739275_5739353_5740972_5741816_5752845_5752980_5761002_5761139_5781540
H1_mix_00079132	chr7	-	5088	15	FSM	ENSG00000122512.16	ENST00000265849.12	5093	15	0	5	0	-5	multi-exon	FALSE	canonical	3	58	junction_2	16.330764757078	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAATTTATGGTAATTTGT	-9	True	NA	NA	False	AATAAA	-20	NA	6009049	5970929	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_5973543_5977587_5977758_5978595_5978697_5982823_5982992_5986758_5987621_5989799_5989956_5991972_5992058_5995533_5995634_5997325_5997424_5999107_5999276_6002452_6002637_6003689_6003793_6003971_6004059_6005891_6006032_6008996
H1_mix_00079133	chr7	-	2765	15	FSM	ENSG00000122512.16	ENST00000642456.1	2765	15	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_14	24.5083284469852	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAGTGATCTTGAGAA	12	True	NA	-38	True	AATACA	-12	NA	6009075	5973273	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_5973543_5977587_5977758_5978595_5978697_5982823_5982992_5986758_5987621_5989799_5989956_5991972_5992058_5995533_5995634_5997325_5997424_5999107_5999276_6002452_6002637_6003689_6003793_6003971_6004059_6005891_6006027_6008996
H1_mix_00079135	chr7	-	4411	15	FSM	ENSG00000086232.13	ENST00000199389.11	4411	15	0	0	0	0	multi-exon	FALSE	canonical	3	602	junction_8	41.9160969518092	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGATGCTGGGCATGGTG	11	False	6059186	NA	False	AATAAA	-25	NA	6059175	6022246	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_6024802_6026727_6026962_6028614_6028698_6028917_6029033_6037423_6037525_6038559_6038672_6040891_6041220_6042932_6042994_6044561_6044662_6046070_6046152_6046991_6047092_6048806_6048845_6049911_6050046_6054545_6054705_6058965
H1_mix_00079136	chr7	-	1153	5	FSM	ENSG00000086232.13	ENST00000463213.5	791	5	-175	-187	-56	187	multi-exon	FALSE	canonical	3	673	junction_4	13.9552857369529	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGAAGTGGGCAGTTTGTA	NA	False	NA	NA	False	AAGAAA	-39	NA	6059231	6046535	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_6047092_6048806_6048845_6049911_6050046_6054545_6054705_6058965
H1_mix_00079137	chr7	-	4487	13	FSM	ENSG00000008256.16	ENST00000350796.8	4482	13	0	-5	0	2	multi-exon	FALSE	canonical	3	58	junction_2	12.3319255953354	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGACTTGGTTCTTTAAA	2	True	NA	NA	False	AATAAA	-26	NA	6272624	6161773	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_6165017_6165272_6165428_6165544_6165617_6165733_6165811_6170534_6170647_6170829_6170979_6171201_6171315_6173652_6173734_6177822_6177942_6187049_6187117_6187656_6187722_6190448_6190532_6272473
H1_mix_00079138	chr7	-	391	3	FSM	ENSG00000008256.16	ENST00000495176.5	574	3	183	0	183	0	multi-exon	FALSE	canonical	3	65	junction_1	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCTCTTCCTCCTGAAC	2243	False	NA	NA	False	NA	NA	NA	6170776	6165544	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_6165617_6165733_6165811_6170534
H1_mix_00079139	chr7	-	505	3	FSM	ENSG00000008256.16	ENST00000478541.1	505	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	5.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGAGCCCAGCACCCCGG	NA	False	NA	NA	False	NA	NA	NA	6177941	6171009	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_6171315_6173652_6173734_6177822
H1_mix_00079140	chr7	-	2227	2	FSM	ENSG00000178397.13	ENST00000313324.9	2220	2	0	-7	0	7	multi-exon	FALSE	canonical	3	153	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTGGTTCTTCTTGTGT	-24	True	NA	-4	True	AATAAA	-44	NA	6348967	6329403	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_6331236_6348572
H1_mix_00079141	chr7	-	2603	7	FSM	ENSG00000164535.15	ENST00000462934.5	2589	7	0	-14	0	14	multi-exon	FALSE	canonical	3	92	junction_6	11.4806600661963	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGCTCTCTTATTGGGG	NA	False	NA	3	True	AATAAA	-33	NA	6422803	6409111	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_6410036_6410129_6410381_6412810_6412884_6412965_6413035_6416626_6416755_6416840_6416922_6421726
H1_mix_00079142	chr7	-	2842	15	FSM	ENSG00000164535.15	ENST00000297056.11	2839	15	0	-3	0	0	multi-exon	FALSE	canonical	3	74	junction_11	15.5169426822452	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGTACAGCTGCGTG	1	True	NA	-11	True	AATAAA	-19	NA	6447954	6409125	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_6410036_6410129_6410381_6412810_6412884_6412965_6413035_6416626_6416755_6416840_6416922_6421726_6421805_6424751_6424836_6425987_6426115_6430479_6430608_6432836_6432960_6434761_6435021_6436361_6436534_6445952_6446105_6447747
H1_mix_00079143	chr7	-	2884	5	FSM	ENSG00000136240.10	ENST00000258739.9	2786	5	-90	-8	-52	8	multi-exon	FALSE	canonical	3	972	junction_2	52.7019923722054	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGGTGTTTGTGTGTTTT	NA	False	NA	-3	True	AATAAA	-26	NA	6484242	6461080	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_6463176_6466070_6466324_6469595_6469755_6474183_6474285_6483966
H1_mix_00079145	chr7	-	551	2	FSM	ENSG00000136240.10	ENST00000462052.1	382	2	-9	-160	0	160	multi-exon	FALSE	canonical	3	1108	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGATAAATCTAAAGCTCT	9	True	NA	NA	False	ATTAAA	-42	NA	6484152	6473919	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_6474285_6483966
H1_mix_00079146	chr7	-	5078	5	FSM	ENSG00000164631.19	ENST00000405858.6	5075	5	0	-3	0	3	multi-exon	FALSE	canonical	3	63	junction_3	6.72681202353685	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCATTTTCTTCTTATC	-18	True	NA	3	True	AGTAAA	-22	NA	6706947	6688429	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_6692704_6697338_6697435_6697684_6697812_6705158_6705224_6706431
H1_mix_00079147	chr7	-	1817	15	FSM	ENSG00000146574.16	ENST00000316731.13	1814	15	0	-3	0	3	multi-exon	FALSE	canonical	3	530	junction_3	430.015193134534	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTGGTGTTGAGTCTCT	965	False	NA	3	True	AATAAA	-23	NA	6826275	6798933	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_6799280_6800947_6801076_6801364_6801524_6804937_6805056_6806003_6806038_6811951_6812064_6812975_6813038_6814763_6814846_6819765_6819942_6822280_6822365_6823312_6823361_6824088_6824167_6824454_6824549_6824639_6824738_6826077
H1_mix_00079151	chr7	-	748	3	FSM	ENSG00000146574.16	ENST00000464543.1	748	3	0	0	0	0	multi-exon	FALSE	canonical	3	1995	junction_1	181	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTTGAATGCCTTACTT	8	True	NA	NA	False	TTTAAA	-12	NA	6826216	6824037	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_6824549_6824639_6824738_6826077
H1_mix_00079154	chr7	-	1578	3	FSM	ENSG00000272894.5	ENST00000609497.5	1578	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	2	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCCTACCATGCACGATT	11	True	NA	-14	True	ATTAAA	-22	NA	7566996	7552461	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_7552923_7555155_7555190_7565913
H1_mix_00079155	chr7	-	508	4	ISM	ENSG00000106399.11	ENST00000396682.6	847	5	480	0	85	0	3prime_fragment	FALSE	canonical	3	2138	junction_1	45.9008593480437	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGGAGAGATTTCTGTGC	-3	True	NA	-32	True	ATTAAA	-27	NA	7640492	7636931	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_7637083_7637863_7637973_7639069_7639145_7640319
H1_mix_00079156	chr7	-	852	5	FSM	ENSG00000106399.11	ENST00000396682.6	847	5	0	-5	0	0	multi-exon	FALSE	canonical	1	1	junction_4	954.033804432526	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGATTTCTGTGCTTTCT	13	True	NA	-27	True	ATTAAA	-32	NA	7640972	7636926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_7637083_7637863_7637973_7639069_7639145_7640319_7640582_7640722
H1_mix_00079158	chr7	-	459	1	FSM	ENSG00000234718.7	ENST00000423039.2	460	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTCATCATATCAACAAG	7	True	NA	NA	False	NA	NA	NA	7742562	7742103	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_7742100_7742600
H1_mix_00079159	chr7	-	1815	15	NNC	ENSG00000003147.19	novel	2440	14	NA	NA	0	6080	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	95.9489660269075	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATATTGTGTGATTCCA	7	True	NA	NA	False	NA	NA	NA	8262543	8107103	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_8107137_8113775_8114045_8127872_8128143_8138839_8138882_8138984_8139048_8141764_8141818_8143874_8143973_8157115_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232756_8235909_8236006_8262439
H1_mix_00079160	chr7	-	2345	14	FSM	ENSG00000003147.19	ENST00000402384.8	2344	14	0	-1	0	1	multi-exon	FALSE	canonical	3	72	junction_13	81.9797203960407	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTTTATGGAGTCTGTT	0	True	NA	38	True	ATTAAA	-26	NA	8262167	8113182	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_8114045_8127872_8128143_8138839_8138882_8138984_8139048_8141764_8141818_8143874_8143973_8157115_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232756_8235909_8236006_8262093
H1_mix_00079161	chr7	-	2444	14	FSM	ENSG00000003147.19	ENST00000406470.6	2440	14	0	-4	0	1	multi-exon	FALSE	canonical	3	272	junction_5	39.6841076801138	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTTTATGGAGTCTGTT	68	False	NA	38	True	ATTAAA	-26	NA	8262612	8113182	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_8114045_8127872_8128143_8138839_8138882_8138984_8139048_8141764_8141818_8143874_8143973_8157115_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232756_8235909_8236006_8262439
H1_mix_00079162	chr7	-	2309	14	FSM	ENSG00000003147.19	ENST00000265577.11	2309	14	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_13	104.561354826135	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGAAGCCTCTTGTGAC	474	False	NA	-34	True	NA	NA	NA	8262206	8113254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_8114045_8127872_8128143_8138839_8138882_8138984_8139048_8141764_8141818_8143874_8143973_8157115_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232753_8235909_8236006_8262093
H1_mix_00079163	chr7	-	2371	14	NIC	ENSG00000003147.19	novel	2440	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	81	junction_12	79.7134661546626	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAGTTTATGGAGTCTGT	7	True	NA	37	True	ATTAAA	-25	NA	8262543	8113183	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_8114045_8127872_8128143_8138839_8138882_8138984_8139048_8141764_8141818_8143874_8143973_8157115_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232753_8235909_8236006_8262439
H1_mix_00079164	chr7	-	1730	14	NIC	ENSG00000003147.19	novel	2440	14	NA	NA	0	9	combination_of_known_junctions	FALSE	canonical	3	16	junction_13	95.4833855865874	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTTGGTATAAAGGGTT	7	True	NA	-3	True	AATGAA	-41	NA	8262543	8113762	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_8114045_8127872_8128143_8138839_8138882_8138984_8139048_8141764_8141818_8143874_8143973_8157115_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232756_8235909_8235941_8262439
H1_mix_00079166	chr7	-	2035	4	FSM	ENSG00000189043.10	ENST00000339600.6	2035	4	0	0	0	0	multi-exon	FALSE	canonical	3	11218	junction_2	589.835570307522	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACGTTTTCTAGAATTGAG	5	True	NA	NA	False	AATAAA	-23	NA	10940153	10931942	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_10933693_10938089_10938148_10938807_10938897_10940015
H1_mix_00079167	chr7	-	502	4	FSM	ENSG00000189043.10	ENST00000470761.5	502	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	5655.29008981856	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTGAAGAAGGAACGTCCA	324	False	NA	NA	False	NA	NA	NA	10939834	10933664	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_10933693_10938089_10938148_10938807_10938897_10939507
H1_mix_00079168	chr7	-	1641	4	FSM	ENSG00000005108.17	ENST00000408005.2	1684	4	43	0	43	0	multi-exon	FALSE	canonical	1	1	junction_1	1.63299316185545	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACTGGATGTCTTTTTAA	NA	False	NA	NA	False	AAAAAG	-6	NA	11379712	11374619	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_11375879_11376569_11376658_11379069_11379281_11379629
H1_mix_00079169	chr7	-	5220	29	FSM	ENSG00000146530.15	ENST00000275358.8	5220	29	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_19	16.3888884084707	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGACTATGTCTGCATCA	-5	True	NA	0	True	AATAAA	-23	NA	12403865	12330884	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_12331198_12333464_12333569_12336140_12336237_12336987_12337084_12337176_12337273_12340321_12340418_12342058_12342155_12343082_12343179_12344194_12344291_12344373_12344470_12351572_12351714_12356110_12356331_12357264_12357516_12359577_12359693_12361146_12361252_12361365_12361522_12367356_12367494_12369544_12370510_12370655_12370865_12372976_12373248_12374688_12374763_12375009_12375228_12377775_12377921_12379476_12379567_12380485_12380734_12383535_12383602_12389126_12389359_12393593_12393779_12403658
H1_mix_00079170	chr7	-	575	2	FSM	ENSG00000146530.15	ENST00000485526.1	573	2	0	-2	0	0	multi-exon	FALSE	canonical	3	103	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGACTATGTCTGCATCA	NA	False	NA	0	True	AATAAA	-23	NA	12333726	12330884	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_12331198_12333464
H1_mix_00079171	chr7	-	5936	30	FSM	ENSG00000146530.15	ENST00000452576.6	5936	30	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_12	20.9417401469052	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTAATAAACTGAATATT	NA	False	NA	-33	True	NA	NA	NA	12403941	12330917	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_12331198_12333464_12333569_12336140_12336237_12336987_12337084_12337176_12337273_12340321_12340418_12342058_12342155_12343082_12343179_12344194_12344291_12344373_12344470_12351572_12351714_12353814_12354488_12356110_12356331_12357264_12357516_12359577_12359693_12361146_12361252_12361365_12361522_12367356_12367494_12369544_12370510_12370655_12370865_12372976_12373248_12374688_12374763_12375009_12375228_12377775_12377921_12379476_12379567_12380485_12380734_12383535_12383602_12389126_12389359_12393593_12393779_12403658
H1_mix_00079173	chr7	-	1934	8	NIC	ENSG00000146530.15	novel	5220	29	NA	NA	16	3113	intron_retention	FALSE	canonical	3	54	junction_5	10.3883765501131	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACAAATGCAGAGAATCTT	50	False	NA	NA	False	AATAAA	-6	NA	12403849	12374450	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_12375228_12377775_12377921_12379476_12379567_12380485_12380734_12383535_12383602_12389126_12389359_12393593_12393779_12403658
H1_mix_00079174	chr7	-	6459	14	FSM	ENSG00000006468.14	ENST00000430479.6	6459	14	0	0	0	0	multi-exon	FALSE	non_canonical	1	35	junction_13	50.5300894599287	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGACTGTCGTGATCAC	6	True	NA	-1	True	AATAAA	-18	NA	13989666	13891228	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_13896088_13900737_13900840_13906429_13906600_13909631_13909701_13911238_13911308_13931501_13931750_13935707_13935897_13939116_13939247_13977426_13977481_13986637_13986686_13988085_13988174_13989007_13989140_13989267_13989465_13989562
H1_mix_00079175	chr7	-	4181	12	FSM	ENSG00000006468.14	ENST00000405358.8	4181	12	0	0	0	0	multi-exon	FALSE	non_canonical	1	7	junction_11	54.1056511614388	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTGTTTTGAATTTCT	4	True	NA	-6	True	AATAAA	-24	NA	13988873	13893267	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_13896088_13900737_13900840_13906429_13906600_13909631_13909701_13911238_13911308_13931501_13931750_13935707_13935897_13939116_13939247_13977426_13977481_13986637_13986686_13988085_13988174_13988679
H1_mix_00079176	chr7	-	6299	12	ISM	ENSG00000006468.14	ENST00000405218.6	3391	13	-1372	-1113	65	0	intron_retention	FALSE	non_canonical	1	50	junction_4	34.8922781483262	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTGTTTTGAATTTCT	118	False	NA	-6	True	AATAAA	-24	NA	13991319	13893267	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_13896088_13900737_13900840_13906429_13906600_13909631_13909701_13911238_13911308_13931501_13931750_13935707_13935897_13939116_13939247_13977426_13977481_13986637_13986686_13988085_13988174_13989007
H1_mix_00079177	chr7	-	3391	13	FSM	ENSG00000006468.14	ENST00000405218.6	3391	13	0	0	0	0	multi-exon	FALSE	non_canonical	1	50	junction_4	41.3671736471753	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTTTTTGTTCTGTTTT	1490	False	NA	-11	True	TTTAAA	-6	NA	13989947	13894380	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_13896088_13900737_13900840_13906429_13906600_13909631_13909701_13911238_13911308_13931501_13931750_13935707_13935897_13939116_13939247_13977426_13977481_13986637_13986686_13988085_13988174_13989007_13989140_13989562
H1_mix_00079179	chr7	-	319	4	FSM	ENSG00000136267.14	ENST00000464065.1	582	4	263	0	263	0	multi-exon	FALSE	canonical	2	5	junction_2	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAAGCATTTCCACAGAG	NA	False	NA	NA	False	NA	NA	NA	14718617	14694076	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_14694195_14698094_14698170_14701680_14701731_14718541
H1_mix_00079180	chr7	-	445	3	FSM	ENSG00000214960.11	ENST00000479493.1	929	3	0	484	0	-484	multi-exon	FALSE	canonical	1	1	junction_1	2	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATCTGGCATGCAGTAC	NA	False	NA	NA	False	AATAAA	-26	NA	16301466	16277060	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_16277362_16278128_16278227_16301420
H1_mix_00079181	chr7	-	1696	2	FSM	ENSG00000171243.8	ENST00000307068.5	1758	2	0	62	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGTTGCCTCTAACATG	-2	True	NA	0	True	AATAAA	-16	NA	16465738	16461542	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_16462964_16465463
H1_mix_00079183	chr7	-	2495	10	FSM	ENSG00000106524.9	ENST00000306999.7	2489	10	0	-6	0	6	multi-exon	FALSE	canonical	3	113	junction_5	9.31081940672739	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGTTTTATAATTTGCT	7	True	NA	-12	True	AATAAA	-26	NA	16645754	16599772	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_16600946_16602379_16602510_16604720_16604850_16609629_16609766_16610548_16610764_16615743_16615905_16624982_16625082_16627039_16627179_16636390_16636456_16645506
H1_mix_00079185	chr7	-	6817	25	FSM	ENSG00000071189.21	ENST00000611725.4	6817	25	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_8	30.5890945981298	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGGAGCTTCTGTATT	24	False	NA	-23	True	AATAAA	-17	NA	17940468	17792841	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_17796940_17798689_17798759_17799008_17799155_17801587_17801660_17803418_17803581_17814833_17814945_17816181_17816290_17821508_17821682_17826021_17826092_17830009_17830048_17834051_17834185_17834760_17834866_17839806_17840001_17845594_17845695_17850346_17850436_17850825_17850965_17868406_17868491_17873527_17873617_17875479_17875582_17875668_17875791_17890362_17890485_17891545_17891636_17893331_17893435_17897333_17897447_17940283
H1_mix_00079186	chr7	-	3734	6	FSM	ENSG00000071189.21	ENST00000409604.1	4146	6	0	412	0	-412	multi-exon	FALSE	canonical	3	10	junction_1	56.687211961782	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCCTTTGATTTGAGTA	8	True	NA	NA	False	NA	NA	NA	17940484	17879838	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_17882944_17890362_17890485_17891545_17891636_17893331_17893435_17897333_17897447_17940283
H1_mix_00079187	chr7	-	3894	4	FSM	ENSG00000105849.6	ENST00000222567.6	3893	4	0	-1	0	1	multi-exon	FALSE	canonical	3	181	junction_1	50.3940031705714	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGGCCTCTGATGTGAT	4	True	NA	-2	True	AATAAA	-22	NA	19709037	19695459	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_19698728_19700071_19700281_19704778_19704921_19708762
H1_mix_00079188	chr7	-	5063	2	ISM	ENSG00000237921.2	ENST00000418764.2	369	4	-1928	362	-1928	-362	intron_retention	FALSE	canonical	3	16	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTACTTAGGTAACTTTGC	NA	False	NA	NA	False	AATACA	-34	NA	19820018	19814046	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_19816315_19817223
H1_mix_00079189	chr7	-	1652	6	NNC	ENSG00000243004.7	novel	799	6	NA	NA	-23	21347	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	234.298442162982	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCCAACTCTTGGTTGT	225	False	NA	NA	False	AATAAA	-14	NA	20125185	19897633	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_19898748_19960921_19960995_19968136_19968396_20028918_20028960_20045502_20045562_20125079
H1_mix_00079190	chr7	-	928	7	NIC	ENSG00000243004.7	novel	955	7	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	224	junction_1	175.706194161352	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTCTATTTATTTACT	227	False	NA	-1	True	AATAAA	-14	NA	20125183	19918980	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_19919261_19919865_19919978_19960921_19960995_19968136_19968396_20028918_20028960_20045502_20045562_20125079
H1_mix_00079191	chr7	-	913	7	NIC	ENSG00000243004.7	novel	955	7	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	224	junction_1	190.768620759984	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTCTATTTATTTACT	225	False	NA	-1	True	AATAAA	-14	NA	20125185	19918980	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_19919261_19919865_19919978_19960921_19960995_19968153_19968396_20028918_20028960_20045502_20045562_20125079
H1_mix_00079192	chr7	-	799	6	NIC	ENSG00000243004.7	novel	799	6	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_1	217.72331064909	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTCTATTTATTTACT	227	False	NA	-1	True	AATAAA	-14	NA	20125183	19918980	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_19919261_19960921_19960995_19968153_19968396_20028918_20028960_20045502_20045562_20125079
H1_mix_00079193	chr7	-	2152	6	NIC	ENSG00000243004.7	novel	799	6	NA	NA	-1357	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_1	199.788488156851	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTCTATTTATTTACT	NA	False	NA	-1	True	AATAAA	-14	NA	20126519	19918980	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_19919261_19960921_19960995_19968136_19968396_20028918_20028960_20045502_20045562_20125079
H1_mix_00079194	chr7	-	743	6	FSM	ENSG00000243004.7	ENST00000415499.5	743	6	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	203.355255648828	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACTCACAGTATCACAAAC	248	False	NA	-33	True	TATAAA	-12	NA	20125162	19931070	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_19931299_19960921_19960995_19968136_19968396_20028918_20028960_20045502_20045562_20125079
H1_mix_00079196	chr7	-	1492	5	ISM	ENSG00000243004.7	ENST00000415499.5	743	6	-21	28895	-21	-16747	5prime_fragment	FALSE	canonical	3	378	junction_1	131.956432203966	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTTAGTCTGTTCTTG	227	False	NA	-2	True	AATATA	-19	NA	20125183	19959965	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_19960995_19968136_19968396_20028918_20028960_20045502_20045562_20125079
H1_mix_00079198	chr7	-	431	4	NIC	ENSG00000243004.7	novel	587	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	117	junction_1	248.121386063802	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGGCCACCAGGGATT	248	False	NA	0	True	ATTAAA	-16	NA	20125162	20007104	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_20007353_20028918_20028960_20045502_20045562_20125079
H1_mix_00079200	chr7	-	888	4	FSM	ENSG00000271133.6	ENST00000603156.2	924	4	30	6	30	-6	multi-exon	FALSE	canonical	3	8	junction_2	6.64997911442	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGGAAGATGGTGACTTGAT	8	True	NA	NA	False	AATAAA	-12	NA	20331747	20328306	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_20328857_20329366_20329514_20329689_20329783_20331649
H1_mix_00079201	chr7	-	762	3	FSM	ENSG00000271133.6	ENST00000605357.6	840	3	-10	88	-10	-83	multi-exon	FALSE	canonical	3	13	junction_2	5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAGCATATTTTAAAGAAA	12	False	NA	NA	False	NA	NA	NA	20331791	20328383	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_20328857_20329366_20329514_20331649
H1_mix_00079202	chr7	-	564	3	NNC	ENSG00000271133.6	novel	840	3	NA	NA	967	-289	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	10	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTGACCCCTGCCAGTT	993	False	NA	-1	True	AATAAA	-26	NA	20330810	20328589	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_20328857_20329366_20329514_20330660
H1_mix_00079204	chr7	-	4480	2	FSM	ENSG00000164651.18	ENST00000418710.3	3626	2	-35	-819	-35	819	multi-exon	FALSE	canonical	3	21	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTTTAGCTTCTTTATTT	4186	False	NA	-3	True	AATAAA	-24	NA	20786921	20781459	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_20785796_20786777
H1_mix_00079210	chr7	-	5640	16	FSM	ENSG00000136237.19	ENST00000401957.6	6159	16	454	65	280	6	multi-exon	FALSE	canonical	0	0	junction_8	1.8427033281447	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGCCTCTTAGTTTCTT	1352	False	NA	-12	True	TTTAAA	-39	NA	22193455	22118302	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_22122522_22125603_22125659_22131036_22131102_22136037_22136126_22136932_22136984_22140024_22140116_22145043_22145223_22146896_22147020_22150406_22150505_22154454_22154605_22156809_22156889_22157854_22157886_22160517_22160616_22162396_22162542_22167069_22167149_22193366
H1_mix_00079211	chr7	-	413	4	FSM	ENSG00000136237.19	ENST00000420196.5	660	4	247	0	247	0	multi-exon	FALSE	canonical	2	3	junction_3	1.24721912892465	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCCTTCATTATCTTCAG	261	False	NA	NA	False	NA	NA	NA	22219991	22167069	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_22167149_22193366_22193456_22193914_22194034_22219865
H1_mix_00079214	chr7	-	546	1	FSM	ENSG00000228803.1	ENST00000444653.1	1130	1	-58	642	-58	-642	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTTCTGTTGATAAAA	NA	False	NA	NA	False	AATGAA	-8	NA	22748862	22748316	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_22748300_22748900
H1_mix_00079215	chr7	-	342	1	FSM	ENSG00000234513.1	ENST00000447425.1	348	1	33	-27	33	27	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTATTCTCTGGAGAAAA	NA	False	NA	NA	False	NA	NA	NA	22773960	22773618	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_22773600_22774000
H1_mix_00079216	chr7	-	410	4	NNC	ENSG00000196683.12	novel	514	4	NA	NA	0	13337	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2581.21302233401	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATACAGTGGAAGAAATGT	15	True	NA	NA	False	NA	NA	NA	22822791	22799290	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_22799324_22812972_22813186_22817999_22818049_22822676
H1_mix_00079217	chr7	-	740	2	FSM	ENSG00000196683.12	ENST00000463284.2	731	2	0	-9	0	9	multi-exon	FALSE	canonical	3	557	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGTTGCTAGGGGGTG	-7	True	NA	NA	False	AATAAA	-10	NA	22822849	22812618	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_22813186_22822676
H1_mix_00079219	chr7	-	435	3	FSM	ENSG00000196683.12	ENST00000358435.9	434	3	0	-1	0	0	multi-exon	FALSE	canonical	3	5429	junction_2	46	1502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTTGAGTCTTTTTTGA	-7	True	NA	-4	True	AATAAA	-16	NA	22822849	22812972	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_22813186_22817999_22818049_22822676
H1_mix_00079220	chr7	-	6262	12	NIC	ENSG00000122591.13	novel	3130	12	NA	NA	1	-16	combination_of_known_junctions	FALSE	canonical	3	126	junction_1	86.7214596870229	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATTGAAATAAAAACTGAAA	51	False	NA	38	True	NA	NA	NA	23014073	22941284	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_22946164_22947032_22947248_22960255_22960416_22961234_22961323_22964414_22964532_22976209_22976306_22976692_22976809_22977340_22977422_22978268_22978449_22983943_22984046_22991060_22991140_23013924
H1_mix_00079221	chr7	-	3130	12	FSM	ENSG00000122591.13	ENST00000409923.5	3130	12	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_1	58.6364341084848	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAGAAATGTCTTTCTT	3	True	NA	53	True	ACTAAA	-38	NA	23014084	22944508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_22946164_22946951_22947248_22960255_22960416_22961234_22961323_22964414_22964532_22976209_22976306_22976692_22976809_22977340_22977422_22978268_22978449_22983943_22984046_22991060_22991140_23013924
H1_mix_00079222	chr7	-	616	4	FSM	ENSG00000122591.13	ENST00000409763.1	616	4	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_1	44.0983748755741	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATGACTCATAGCCCAT	50	False	NA	-3	True	AATAAA	-24	NA	23014074	22978163	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_22978449_22983943_22984046_22991060_22991140_23013924
H1_mix_00079223	chr7	-	3572	3	FSM	ENSG00000230658.2	ENST00000662806.1	3578	3	19	-13	18	13	multi-exon	FALSE	canonical	2	2	junction_2	4	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATGAAAAAAAAAAAAAAAA	4	True	NA	NA	False	NA	NA	NA	23105684	23100200	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_23103579_23104249_23104318_23105558
H1_mix_00079224	chr7	-	4274	15	FSM	ENSG00000136231.14	ENST00000258729.8	4274	15	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_8	12.6474971307951	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTTGTGTAGTATGTTT	-7	True	NA	-4	True	AATAAA	-22	NA	23470491	23310208	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_23312461_23312734_23312849_23313521_23313654_23317638_23317714_23319137_23319255_23342063_23342190_23343717_23343854_23345939_23346063_23347599_23347735_23351304_23351587_23361533_23361598_23361689_23361742_23418775_23418825_23468481_23468543_23469935
H1_mix_00079225	chr7	-	529	4	FSM	ENSG00000136231.14	ENST00000498363.1	529	4	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_2	16.4991582276861	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACGGAAGTAAAGGCTCAGG	2810	False	NA	NA	False	NA	NA	NA	23317833	23312372	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_23312461_23312734_23312849_23313521_23313654_23317638
H1_mix_00079227	chr7	-	1785	8	FSM	ENSG00000164548.12	ENST00000297071.9	1785	8	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_7	52.0019622863662	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATTGTCTCTTTATTGT	-2	True	NA	-4	True	AATAAA	-19	NA	23531981	23504779	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_23505570_23505745_23505814_23506137_23506267_23507419_23507536_23512893_23513083_23516362_23516529_23521706_23521841_23531788
H1_mix_00079228	chr7	-	1864	9	NIC	ENSG00000164548.12	novel	1785	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_7	166.237734509948	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATTGTCTCTTTATTGT	-2	True	NA	-4	True	AATAAA	-19	NA	23531981	23504779	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_23505570_23505745_23505814_23506137_23506267_23507419_23507536_23512893_23513083_23516362_23516529_23521706_23521841_23522353_23522433_23531788
H1_mix_00079229	chr7	-	2233	10	FSM	ENSG00000164548.12	ENST00000392502.8	2229	10	0	-4	0	0	multi-exon	FALSE	canonical	2	9	junction_7	192.381436952609	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATTGTCTCTTTATTGT	-14	True	NA	-4	True	AATAAA	-19	NA	23532041	23504779	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_23505570_23505745_23505811_23506137_23506267_23507419_23507536_23512893_23513083_23516362_23516529_23521706_23521841_23522131_23522433_23531180_23531271_23531788
H1_mix_00079230	chr7	-	2146	9	FSM	ENSG00000164548.12	ENST00000538367.6	2142	9	0	-4	0	0	multi-exon	FALSE	canonical	2	9	junction_7	166.92419686792	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATTGTCTCTTTATTGT	-14	True	NA	-4	True	AATAAA	-19	NA	23532041	23504779	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_23505570_23505745_23505814_23506137_23506267_23507419_23507536_23512893_23513083_23516362_23516529_23521706_23521841_23522131_23522433_23531788
H1_mix_00079231	chr7	-	2162	9	NIC	ENSG00000164548.12	novel	2142	9	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_7	161.521476900132	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATTGTCTCTTTATTGT	-19	True	NA	-4	True	AATAAA	-19	NA	23532046	23504779	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_23505570_23505745_23505814_23506137_23506267_23507419_23507536_23512893_23513083_23516362_23516529_23521706_23521841_23522120_23522433_23531788
H1_mix_00079236	chr7	-	2250	10	FSM	ENSG00000105928.16	ENST00000645220.1	2250	10	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	10.9013534101431	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTTTGCTTTTTATTCT	-22	True	NA	-3	True	ATTAAA	-18	NA	24757464	24698354	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_24699260_24702759_24702834_24706183_24706377_24708126_24708255_24710223_24710389_24717253_24717375_24719046_24719219_24744561_24744755_24749563_24749794_24757395
H1_mix_00079239	chr7	-	6833	23	FSM	ENSG00000070882.13	ENST00000313367.7	6749	23	-86	2	-86	-2	multi-exon	TRUE	canonical	3	11	junction_11	12.6801074114907	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCCACTTTTGTCTTTGT	1650	False	NA	-7	True	AATAAA	-14	NA	24980264	24796541	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_24800280_24804314_24804438_24806775_24806903_24809806_24809952_24815058_24815204_24816609_24816689_24820174_24820239_24830767_24830906_24834485_24834737_24840689_24840784_24842278_24842414_24849068_24849177_24852503_24852635_24861612_24861770_24863199_24863293_24863495_24863600_24865341_24865466_24866069_24866238_24870731_24870846_24871741_24871796_24871952_24872070_24892376_24892622_24979885
H1_mix_00079240	chr7	-	6550	22	NIC	ENSG00000070882.13	novel	6749	23	NA	NA	78	-13	combination_of_known_junctions	FALSE	canonical	3	17	junction_15	10.0659953824025	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATGGAAAAAAAGGCCACT	1814	False	NA	-18	True	AATAAA	-3	NA	24980100	24796552	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_24800280_24804314_24804438_24806775_24806903_24809806_24809952_24815058_24815204_24816609_24816689_24820174_24820239_24830767_24830906_24834485_24834737_24840689_24840784_24842278_24842414_24852503_24852635_24861612_24861770_24863199_24863293_24863495_24863600_24865341_24865466_24866069_24866238_24870731_24870846_24871741_24871796_24871952_24872070_24892376_24892622_24979885
H1_mix_00079242	chr7	-	1280	4	NNC	ENSG00000172115.9	novel	799	4	NA	NA	0	21927	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1281.63966161407	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCGGGCACGGTGGCTGAC	23	True	NA	NA	False	NA	NA	NA	25125260	25096728	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_25096754_25122832_25123850_25123950_25124128_25125199
H1_mix_00079243	chr7	-	5481	3	FSM	ENSG00000172115.9	ENST00000305786.7	5432	3	0	-49	0	49	multi-exon	FALSE	canonical	3	2580	junction_1	129.5	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCTTATGCCTGTAATC	23	True	NA	40	True	NA	NA	NA	25125260	25118606	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_25123850_25123950_25124128_25125199
H1_mix_00079245	chr7	-	4289	4	NNC	ENSG00000172115.9	novel	5432	3	NA	NA	-63	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	1280.7000689727	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACCAGATGCCTGTTTT	2	True	NA	-9	True	AATAAA	-17	NA	25125323	25118655	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_25120174_25121379_25123850_25123950_25124128_25125199
H1_mix_00079247	chr7	-	380	1	FSM	ENSG00000239622.1	ENST00000466070.1	380	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCTTCCTTCCCCCAAGG	NA	False	NA	NA	False	NA	NA	NA	25689959	25689579	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_25689600_25690000
H1_mix_00079248	chr7	-	1726	12	NNC	ENSG00000122566.22	novel	3664	12	NA	NA	13	9817	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2811.32449594272	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAAGCTAAGAAATTAA	1040	False	NA	NA	False	AAAAAG	-2	NA	26200733	26161333	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_26161362_26191843_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
H1_mix_00079249	chr7	-	3850	12	FSM	ENSG00000122566.22	ENST00000679021.1	3850	12	0	0	0	0	multi-exon	FALSE	canonical	3	691	junction_1	3454.39740831096	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAAGACCAGGTTAATT	726	False	NA	NA	False	AAGAAA	-2	NA	26201047	26189665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190461_26190992_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26200571
H1_mix_00079250	chr7	-	4068	11	FSM	ENSG00000122566.22	ENST00000677906.1	4068	11	0	0	0	0	multi-exon	FALSE	canonical	3	691	junction_1	2687.75033066689	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAAGACCAGGTTAATT	472	False	NA	NA	False	AAGAAA	-2	NA	26201301	26189665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190461_26190992_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
H1_mix_00079251	chr7	-	4060	11	FSM	ENSG00000122566.22	ENST00000677669.1	4060	11	0	0	0	0	multi-exon	FALSE	canonical	3	691	junction_1	2759.75241824335	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAAGACCAGGTTAATT	472	False	NA	NA	False	AAGAAA	-2	NA	26201301	26189665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190461_26190992_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26197018_26197314_26197462_26197621_26197733_26200571
H1_mix_00079252	chr7	-	3792	11	FSM	ENSG00000122566.22	ENST00000677321.1	3792	11	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_4	3509.38587932419	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAAGACCAGGTTAATT	472	False	NA	NA	False	AAGAAA	-2	NA	26201301	26189665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190461_26190992_26192339_26192494_26192578_26193250_26193374_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
H1_mix_00079253	chr7	-	4044	13	FSM	ENSG00000122566.22	ENST00000679123.1	4044	13	0	0	0	0	multi-exon	FALSE	canonical	3	691	junction_1	3411.16939463418	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAAGACCAGGTTAATT	376	False	NA	NA	False	AAGAAA	-2	NA	26201397	26189665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190461_26190992_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26200571
H1_mix_00079254	chr7	-	4092	12	FSM	ENSG00000122566.22	ENST00000677574.1	4092	12	0	0	0	0	multi-exon	FALSE	canonical	3	691	junction_1	2633.63893682995	1599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAAGACCAGGTTAATT	292	False	NA	NA	False	AAGAAA	-2	NA	26201481	26189665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190461_26190992_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
H1_mix_00079255	chr7	-	3824	11	FSM	ENSG00000122566.22	ENST00000618183.5	3628	11	0	-196	0	0	multi-exon	FALSE	canonical	3	5879	junction_10	1275.85101402946	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAATGAATATCAGTGTT	1	True	NA	NA	False	NA	NA	NA	26200746	26189730	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
H1_mix_00079256	chr7	-	3664	12	FSM	ENSG00000122566.22	ENST00000354667.8	3664	12	0	0	0	0	multi-exon	FALSE	canonical	3	1844	junction_11	2907.95409037618	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGCGTTTGAGTACTC	1	True	NA	-16	True	AATAAA	-23	NA	26200746	26189926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26200571
H1_mix_00079257	chr7	-	4121	11	FSM	ENSG00000122566.22	ENST00000356674.8	4106	11	0	-15	0	0	multi-exon	FALSE	canonical	3	1844	junction_10	2963.27738323634	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGCGTTTGAGTACTC	726	False	NA	-16	True	AATAAA	-23	NA	26201047	26189926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26200571
H1_mix_00079258	chr7	-	2452	14	FSM	ENSG00000122566.22	ENST00000676746.1	2438	14	0	-14	0	0	multi-exon	FALSE	canonical	3	34	junction_3	4040.9218029741	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGCGTTTGAGTACTC	726	False	NA	-16	True	AATAAA	-23	NA	26201047	26189926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190461_26190992_26191129_26191421_26191651_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26200571
H1_mix_00079259	chr7	-	4339	10	FSM	ENSG00000122566.22	ENST00000677839.1	4333	10	0	-6	0	0	multi-exon	FALSE	canonical	3	5879	junction_9	1279.16578718754	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGCGTTTGAGTACTC	472	False	NA	-16	True	AATAAA	-23	NA	26201301	26189926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
H1_mix_00079260	chr7	-	2670	13	FSM	ENSG00000122566.22	ENST00000678935.1	2656	13	0	-14	0	0	multi-exon	FALSE	canonical	3	34	junction_3	3812.10833689472	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGCGTTTGAGTACTC	472	False	NA	-16	True	AATAAA	-23	NA	26201301	26189926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190461_26190992_26191129_26191421_26191651_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
H1_mix_00079261	chr7	-	3744	11	FSM	ENSG00000122566.22	ENST00000678962.1	3730	11	0	-14	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2874.24230885289	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGCGTTTGAGTACTC	472	False	NA	-16	True	AATAAA	-23	NA	26201301	26189926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190461_26191055_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
H1_mix_00079262	chr7	-	2479	13	FSM	ENSG00000122566.22	ENST00000678697.1	2463	13	0	-16	0	0	multi-exon	FALSE	canonical	2	13	junction_2	3365.45057553798	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGCGTTTGAGTACTC	472	False	NA	-16	True	AATAAA	-23	NA	26201301	26189926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190461_26190992_26191129_26192300_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
H1_mix_00079263	chr7	-	3768	12	FSM	ENSG00000122566.22	ENST00000678449.1	3754	12	0	-14	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2811.32449594272	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGCGTTTGAGTACTC	292	False	NA	-16	True	AATAAA	-23	NA	26201481	26189926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190461_26191055_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
H1_mix_00079264	chr7	-	3538	13	FSM	ENSG00000122566.22	ENST00000678431.1	3522	13	0	-16	0	0	multi-exon	FALSE	canonical	3	80	junction_2	3353.214871168	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGCGTTTGAGTACTC	292	False	NA	-16	True	AATAAA	-23	NA	26201481	26189926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190461_26190992_26191129_26191421_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
H1_mix_00079265	chr7	-	2348	12	FSM	ENSG00000122566.22	ENST00000678779.1	2348	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3499.18703191149	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATAAAATGCTGTTCATT	472	False	NA	-46	True	NA	NA	NA	26201301	26189956	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190461_26191055_26191129_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
H1_mix_00079266	chr7	-	1724	13	FSM	ENSG00000122566.22	ENST00000360787.8	1724	13	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_2	3794.24229004363	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGGTGTAATGTTTACA	1	True	NA	-7	True	AATAAA	-18	NA	26200746	26190124	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190461_26190992_26191129_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26200571
H1_mix_00079267	chr7	-	6284	9	FSM	ENSG00000122566.22	ENST00000463181.5	6284	9	0	0	0	0	multi-exon	FALSE	canonical	3	8038	junction_5	856.485952891231	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTAGTTGAGGTTCTTGA	989	False	NA	NA	False	AATAAA	-27	NA	26200784	26190303	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621
H1_mix_00079268	chr7	-	1410	2	FSM	ENSG00000225792.2	ENST00000656289.1	1574	2	0	164	0	-164	multi-exon	FALSE	canonical	3	11	junction_1	0	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCATGAGAGAGATGGCT	733	False	NA	NA	False	TTTAAA	-37	NA	26376237	26371309	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26372569_26376086
H1_mix_00079269	chr7	-	3853	13	FSM	ENSG00000005020.13	ENST00000345317.7	3839	13	-11	-3	-11	3	multi-exon	TRUE	canonical	2	12	junction_9	3.69966214673719	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATGATGCTAATAATTCAA	-14	True	NA	-3	True	AATAAA	-21	NA	26864601	26667064	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26669657_26670090_26670193_26684735_26684849_26690284_26690363_26725427_26725566_26725922_26725987_26726881_26727007_26738794_26738879_26739886_26739965_26844029_26844138_26854136_26854163_26854784_26854891_26864362
H1_mix_00079271	chr7	-	687	1	FSM	ENSG00000233830.2	ENST00000453115.1	687	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	324	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCGGTTGGGAGGGAAT	27	False	NA	NA	False	NA	NA	NA	27458849	27458162	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_27458200_27458800
H1_mix_00079272	chr7	-	2001	8	FSM	ENSG00000106049.9	ENST00000265395.7	1878	8	-118	-5	-118	5	multi-exon	FALSE	canonical	3	269	junction_5	28.8231766154267	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGTGTTTTTGTTTCTT	-77	True	NA	-2	True	AATAAA	-21	NA	27663001	27525436	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_27526373_27531191_27531349_27538340_27538418_27542966_27543101_27629370_27629493_27632335_27632446_27649472_27649634_27662697
H1_mix_00079273	chr7	-	3155	5	FSM	ENSG00000153814.13	ENST00000283928.10	3173	5	22	-4	22	0	multi-exon	FALSE	canonical	3	97	junction_3	12.852528934027	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTCTTTATTTTCCTT	5	True	NA	NA	False	AATAAA	-23	NA	28180773	27830572	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_27832977_27840697_27840868_27895219_27895417_27991908_27991982_28180462
H1_mix_00079274	chr7	-	4997	1	FSM	ENSG00000255690.3	ENST00000539664.3	4973	1	0	-24	0	24	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACACTTTCATAATGACAC	-1	True	NA	NA	False	AATAAA	-42	NA	28958330	28953333	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_28953300_28958300
H1_mix_00079275	chr7	-	2103	13	FSM	ENSG00000106066.15	ENST00000265394.10	2087	13	2	-18	2	18	multi-exon	FALSE	canonical	3	360	junction_12	45.5418000912959	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATAAGCAGATGCTCTTA	-61	True	NA	NA	False	AATAAA	-35	NA	29146535	28995216	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_28995883_29030576_29030760_29064060_29064235_29066022_29066122_29071772_29071905_29072300_29072424_29086483_29086551_29092622_29092703_29095083_29095143_29096102_29096218_29112703_29112823_29120892_29121072_29146428
H1_mix_00079276	chr7	-	2387	13	FSM	ENSG00000106066.15	ENST00000396276.7	1739	13	0	-648	0	252	multi-exon	FALSE	canonical	3	54	junction_12	120.402680848707	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATATATACATTTATAAATA	-23	True	NA	NA	False	NA	NA	NA	29146497	28994982	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_28995883_29030576_29030760_29064060_29064235_29066022_29066122_29071772_29071905_29072300_29072424_29086483_29086551_29092622_29092703_29095083_29095143_29096102_29096218_29112703_29112823_29120892_29121072_29146340
H1_mix_00079279	chr7	-	5260	8	FSM	ENSG00000136193.17	ENST00000242059.10	5254	8	0	-6	0	1	multi-exon	FALSE	canonical	3	427	junction_2	25.4878922836162	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGAGTGGCCTCTTCTGTT	3	True	NA	0	True	AATAAA	-22	NA	29989801	29920102	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_29924116_29926451_29926633_29936555_29936722_29940681_29940877_29943976_29944180_29955178_29955361_29968908_29969069_29989641
H1_mix_00079280	chr7	-	1552	7	FSM	ENSG00000136193.17	ENST00000425819.6	1552	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	161.252820819427	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCAGTAGCGGTTTCTTT	922	False	NA	NA	False	NA	NA	NA	29989712	29923561	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_29924116_29926451_29926633_29936555_29936722_29940681_29940877_29943976_29944180_29955178_29955361_29989641
H1_mix_00079282	chr7	-	4978	4	FSM	ENSG00000106080.11	ENST00000222803.10	4978	4	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	8.49836585598798	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATTTTGTGAAAAATTCT	-36	True	NA	-3	True	AATAAA	-18	NA	30026702	30010586	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_30014894_30018995_30019124_30022664_30022817_30026311
H1_mix_00079283	chr7	-	4527	15	NIC	ENSG00000106100.11	novel	4503	14	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_13	4.78731316574744	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACGGGTTGAGTCTGGAGT	8	True	NA	-3	True	AATAAA	-16	NA	30478721	30424529	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_30425711_30429373_30429458_30433095_30433180_30435997_30436082_30437572_30437657_30446140_30446225_30446966_30447051_30448297_30448382_30451215_30453041_30455136_30455312_30456720_30457043_30459151_30459241_30459900_30460042_30463608_30463699_30478605
H1_mix_00079285	chr7	-	1177	4	FSM	ENSG00000006625.18	ENST00000275428.9	1158	4	0	-19	0	19	multi-exon	FALSE	canonical	3	676	junction_3	126.388290596875	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCATTTCATTATGTTG	-13	True	NA	14	True	AATAAA	-36	NA	30504829	30496601	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_30497236_30498802_30498939_30500535_30500682_30504568
H1_mix_00079286	chr7	-	1031	3	FSM	ENSG00000006625.18	ENST00000440082.5	1012	3	0	-19	0	19	multi-exon	FALSE	canonical	3	345	junction_2	312.5	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCATTTCATTATGTTG	-13	True	NA	14	True	AATAAA	-36	NA	30504829	30496601	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_30497236_30498802_30498939_30504568
H1_mix_00079287	chr7	-	1053	3	FSM	ENSG00000006625.18	ENST00000005374.10	1032	3	0	-21	0	19	multi-exon	FALSE	canonical	3	9	junction_1	333.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCATTTCATTATGTTG	2620	False	30504859	14	True	AATAAA	-36	NA	30504841	30496601	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_30497236_30500535_30500682_30504568
H1_mix_00079288	chr7	-	836	2	FSM	ENSG00000006625.18	ENST00000409144.5	836	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGGTTTAACCTGTTGT	15	True	NA	-17	True	AATAAA	-5	NA	30504801	30496632	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_30497236_30504568
H1_mix_00079290	chr7	-	1156	4	FSM	ENSG00000006625.18	ENST00000447901.1	784	4	-28	-344	0	0	multi-exon	FALSE	canonical	3	25	junction_2	142.549016910753	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGGTTTAACCTGTTGT	-13	True	NA	-17	True	AATAAA	-5	NA	30504829	30496632	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_30497236_30497740_30497897_30498802_30498939_30504568
H1_mix_00079291	chr7	-	954	4	FSM	ENSG00000006625.18	ENST00000409436.2	954	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	322.759972735158	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGAGAAAGTTGATATTC	0	True	NA	NA	False	ATTAAA	-16	NA	30504816	30497472	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_30497897_30498802_30498939_30500535_30500682_30504568
H1_mix_00079292	chr7	-	1101	4	FSM	ENSG00000196295.13	ENST00000582145.5	1101	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1.4142135623731	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGCACAGAGGAGACGCTT	6328	False	NA	NA	False	NA	NA	NA	30573100	30561561	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_30562129_30563722_30563999_30568832_30568990_30572999
H1_mix_00079293	chr7	-	1629	3	FSM	ENSG00000196295.13	ENST00000663031.1	1629	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTCCCAAGAAAAATCACTT	9607	False	NA	NA	False	NA	NA	NA	30569821	30561756	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_30562129_30563730_30563999_30568832
H1_mix_00079294	chr7	-	890	4	FSM	ENSG00000196295.13	ENST00000580440.7	891	4	0	1	0	-1	multi-exon	FALSE	canonical	3	15	junction_2	3.85861230093008	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAGTTCATGTGACTTAA	-17	True	NA	NA	False	AATAAA	-39	NA	30594774	30577499	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_30578092_30579230_30579315_30585329_30585480_30594710
H1_mix_00079295	chr7	-	916	4	FSM	ENSG00000196295.13	ENST00000657049.1	2119	4	1203	0	-20	0	multi-exon	FALSE	canonical	2	4	junction_1	4.96655480858378	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTCATAAATTAAATAAATA	9439	False	NA	NA	False	AATAAA	-6	NA	30585479	30577532	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_30578092_30579005_30579129_30579230_30579315_30585329
H1_mix_00079297	chr7	-	2219	5	FSM	ENSG00000106355.10	ENST00000450169.7	2214	5	0	-5	0	5	multi-exon	FALSE	canonical	3	2320	junction_4	40.0530897684561	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTGCGTTTGATTTA	11	True	NA	0	True	NA	NA	NA	32490380	32485332	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_32487294_32487684_32487758_32488624_32488653_32489248_32489345_32490319
H1_mix_00079298	chr7	-	740	5	FSM	ENSG00000106355.10	ENST00000409909.7	740	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_4	1010.22299518473	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGATTTTTCTTCTGATT	-18	True	NA	-5	True	ATTAAA	-18	NA	32495283	32486804	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_32487294_32487684_32487758_32488624_32488653_32489248_32489345_32495229
H1_mix_00079299	chr7	-	687	5	FSM	ENSG00000106355.10	ENST00000410044.5	687	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1031.8644533077	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATTTTGTTTATTCTA	4904	False	NA	-6	True	AATAAA	-16	NA	32490361	32487034	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_32487294_32487684_32487758_32488624_32488653_32489248_32489345_32490130
H1_mix_00079300	chr7	-	504	4	FSM	ENSG00000106355.10	ENST00000409987.5	504	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	1105.63194599288	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATTTTGTTTATTCTA	11	True	NA	-6	True	AATAAA	-16	NA	32490380	32487034	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_32487294_32487684_32487758_32489233_32489345_32490319
H1_mix_00079301	chr7	-	1295	5	FSM	ENSG00000106355.10	ENST00000223084.7	1295	5	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_4	1021.4765048693	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATTTTGTTTATTCTA	4402	False	NA	-6	True	AATAAA	-16	NA	32490863	32487034	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_32487294_32487684_32487758_32488624_32488653_32489248_32489345_32490024
H1_mix_00079302	chr7	-	1738	3	FSM	ENSG00000106355.10	ENST00000480956.1	1736	3	0	-2	0	0	multi-exon	FALSE	canonical	3	2320	junction_2	48	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGAAAATAAAGGTGTTT	20	True	NA	-34	True	AAAAAG	-23	NA	32490371	32487062	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_32488653_32489248_32489345_32490319
H1_mix_00079304	chr7	-	1303	6	FSM	ENSG00000205763.14	ENST00000381639.3	1303	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	6.8585712797929	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTACTTCACTTGCTTTCT	13	True	NA	-10	True	AATAAA	-19	NA	32943176	32916814	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_32917543_32918310_32918373_32921338_32921431_32930077_32930109_32933813_32933897_32942869
H1_mix_00079305	chr7	-	1805	10	FSM	ENSG00000122643.23	ENST00000456458.5	1742	10	20	-83	0	83	multi-exon	FALSE	canonical	3	89	junction_9	103.163420639414	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCCGTCTGCCTGTCTT	29	False	33062793	17	True	NA	NA	NA	33062776	33014046	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_33014832_33015669_33015871_33017438_33017602_33019634_33019725_33021271_33021358_33022052_33022100_33024038_33024109_33026816_33026916_33035933_33035989_33062567
H1_mix_00079308	chr7	-	463	3	FSM	ENSG00000122643.23	ENST00000461851.2	562	3	118	-19	118	19	multi-exon	FALSE	canonical	3	312	junction_2	15	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTATTCTGGTGTTGTAA	NA	False	NA	NA	False	TTTAAA	-18	NA	33026915	33021805	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_33022100_33024038_33024109_33026816
H1_mix_00079309	chr7	-	1135	6	FSM	ENSG00000164610.10	ENST00000297157.8	1135	6	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_5	22.3284571791246	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATGTATTTATTTATGA	-4	True	NA	-2	True	AATAAA	-23	NA	33109404	33094796	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_33095433_33096492_33096555_33097270_33097363_33099306_33099437_33100530_33100562_33109220
H1_mix_00079311	chr7	-	2161	1	FSM	ENSG00000230356.1	ENST00000432906.1	1801	1	-60	-300	-60	300	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGGGCTACAAGAAACAG	6191	False	NA	NA	False	NA	NA	NA	34752113	34749952	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_34750000_34752100
H1_mix_00079312	chr7	-	5030	22	FSM	ENSG00000173852.16	ENST00000638088.2	5030	22	0	0	0	0	multi-exon	TRUE	canonical	3	105	junction_21	19.6791727791043	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAAGTGTTTTTCTTGATT	-6	True	NA	-3	True	ATTAAA	-19	NA	35037485	34928880	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_34931730_34937993_34938120_34939275_34939376_34940152_34940328_34941764_34941885_34942614_34942640_34945666_34945717_34947629_34947702_34949796_34949899_34954697_34954779_34955307_34955368_34957983_34958071_34966893_34966972_34969432_34969533_34973513_34973606_34989883_34989942_35010467_35010562_35011329_35011451_35013567_35013706_35017881_35017970_35018571_35018597_35037096
H1_mix_00079313	chr7	-	3110	8	FSM	ENSG00000122557.11	ENST00000396081.5	3057	8	-51	-2	-51	2	multi-exon	FALSE	canonical	3	79	junction_6	11.8425038720358	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTATGGGATATTTGTTC	0	True	NA	-2	True	AATAAA	-20	NA	35695186	35632656	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_35633852_35634311_35634430_35635134_35635459_35638349_35638473_35667433_35667589_35670214_35670329_35673200_35673279_35694183
H1_mix_00079314	chr7	-	2886	9	FSM	ENSG00000122557.11	ENST00000311350.8	2884	9	0	-2	0	2	multi-exon	FALSE	canonical	3	20	junction_8	28.552309451251	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTATGGGATATTTGTTC	8	True	NA	-2	True	AATAAA	-20	NA	35695135	35632656	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_35633852_35634311_35634430_35635134_35635459_35638349_35638473_35667433_35667589_35670214_35670329_35673200_35673279_35694183_35694628_35694800
H1_mix_00079315	chr7	-	2676	7	NIC	ENSG00000122557.11	novel	3057	8	NA	NA	-55	0	intron_retention	FALSE	canonical	3	7	junction_2	35.882524375461	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTTATGGGATATTTGT	-4	True	NA	-4	True	AATAAA	-18	NA	35695078	35632658	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_35633852_35634311_35634430_35638349_35638473_35667433_35667589_35670214_35670329_35673200_35673279_35694183
H1_mix_00079317	chr7	-	4462	7	FSM	ENSG00000164542.13	ENST00000440378.6	4462	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	5.37742193496723	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGTTTTTTATTTTGT	-46	True	NA	-7	True	NA	NA	NA	36367240	36324151	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_36326919_36330981_36331080_36333855_36334162_36335045_36335179_36336153_36336298_36356901_36357591_36366915
H1_mix_00079318	chr7	-	3596	6	NIC	ENSG00000164542.13	novel	4462	7	NA	NA	33	3	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	8.09938269252663	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGATGAAGTGTGTGGCT	56	False	NA	-8	True	AATAAA	-20	NA	36367138	36324226	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_36326919_36330981_36331080_36333855_36334162_36335045_36335179_36336153_36336298_36366915
H1_mix_00079321	chr7	-	5367	22	FSM	ENSG00000155849.16	ENST00000448602.5	2621	22	-151	-2595	-151	-50	multi-exon	FALSE	canonical	3	92	junction_21	30.4054237911325	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTCTGCTATTCATATTA	55	False	NA	NA	False	AGTAAA	-35	NA	37449374	36852955	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_36855752_36861658_36861737_36870392_36870476_36878009_36878118_36887559_36887673_36894853_36895018_37013298_37013436_37096618_37096728_37133129_37133235_37211385_37211518_37213334_37213458_37216644_37216696_37222614_37222694_37224878_37225031_37233094_37233195_37244355_37244392_37259180_37259351_37271831_37271883_37314849_37314923_37315919_37315961_37342612_37342764_37448859
H1_mix_00079322	chr7	-	5696	22	FSM	ENSG00000155849.16	ENST00000310758.9	5092	22	-559	-45	-200	45	multi-exon	FALSE	canonical	3	145	junction_21	22.4306439240623	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGGAAGGAGAATTAACT	6	False	NA	NA	False	TTTAAA	-30	NA	37449423	36852860	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_36855752_36861658_36861737_36870392_36870476_36878009_36878118_36887559_36887673_36894853_36895018_37013298_37013436_37096618_37096728_37133129_37133235_37211385_37211518_37213334_37213458_37216644_37216696_37222614_37222694_37224878_37225031_37233094_37233195_37244355_37244392_37259180_37259351_37271831_37271883_37314849_37314923_37315919_37315961_37342612_37342764_37448674
H1_mix_00079325	chr7	-	3228	20	FSM	ENSG00000078053.17	ENST00000325590.9	3145	20	-79	-4	-79	4	multi-exon	FALSE	canonical	2	10	junction_9	5.67884737241849	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGATGAGTCTTTTTTTT	6	True	NA	-7	True	AATAAA	-34	NA	38631499	38383699	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_38384926_38389803_38389906_38391747_38392018_38394004_38394215_38422420_38422478_38426953_38426987_38429841_38429866_38432188_38432213_38436271_38436389_38461282_38461412_38462974_38463114_38465466_38465550_38466172_38466249_38475330_38475417_38476861_38476970_38491049_38491146_38494432_38494528_38503649_38503705_38534930_38535012_38631282
H1_mix_00079327	chr7	-	6797	29	FSM	ENSG00000006715.16	ENST00000310301.9	5854	29	0	-943	0	943	multi-exon	TRUE	canonical	3	155	junction_12	21.8817555166352	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGGAGTCATTAGGATCA	1	True	NA	NA	False	AATGAA	-28	NA	38909191	38722030	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_38726327_38726908_38726989_38728541_38728587_38728691_38728792_38741984_38742122_38743401_38743543_38745558_38745614_38752175_38752314_38754701_38754753_38754894_38754937_38756837_38756983_38758353_38758482_38763454_38763548_38765579_38765662_38767536_38767599_38771197_38771255_38772521_38772638_38774114_38774245_38776678_38776777_38789800_38789868_38795464_38795612_38796744_38796865_38817816_38817883_38821202_38821266_38830253_38830329_38862544_38862623_38869145_38869254_38898090_38898130_38909153
H1_mix_00079331	chr7	-	1591	1	FSM	ENSG00000175741.5	ENST00000426392.1	563	1	-204	-824	-204	824	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCTTTTAGTTGTT	NA	False	NA	NA	False	AATAAA	-17	NA	39855260	39853669	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_39853700_39855300
H1_mix_00079334	chr7	-	952	3	NNC	ENSG00000168303.9	novel	7627	2	NA	NA	0	61076	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	462	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGTGGTGCATGCCTGT	5	True	NA	NA	False	NA	NA	NA	40134622	40064950	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_40064992_40132742_40133260_40134228
H1_mix_00079335	chr7	-	7627	2	FSM	ENSG00000168303.9	ENST00000306984.8	7627	2	0	0	0	0	multi-exon	FALSE	canonical	3	924	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTATATTTACTTTCTCTTC	5	True	NA	NA	False	ATTAAA	-18	NA	40134622	40126026	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_40133260_40134228
H1_mix_00079337	chr7	-	8633	15	FSM	ENSG00000106571.15	ENST00000395925.8	8405	15	-228	0	118	0	multi-exon	FALSE	canonical	3	32	junction_14	23.5307007450059	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATTGGGTTGTTTATT	NA	False	NA	-4	True	AATAAA	-19	NA	42237437	41960948	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_41966642_41967595_41967924_41972336_41972628_41977557_41977723_41978598_41978749_42023467_42023609_42025263_42025378_42026198_42026413_42040037_42040240_42045383_42045531_42048490_42048697_42076751_42076858_42148225_42148469_42223129_42223296_42236970
H1_mix_00079339	chr7	-	8397	15	NIC	ENSG00000106571.15	novel	8237	15	NA	NA	-126	18	combination_of_known_junctions	FALSE	canonical	3	55	junction_2	20.6802676333687	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATGCATAGTTGAATGG	NA	False	NA	14	True	AATAAA	-37	NA	42237996	41960930	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_41966642_41967595_41967924_41972336_41972628_41977557_41977723_41978598_41978749_42023467_42023609_42025263_42025378_42026198_42026413_42040037_42040240_42045383_42045531_42048490_42048697_42076751_42076858_42148225_42148469_42223129_42223296_42237783
H1_mix_00079340	chr7	-	2375	2	ISM	ENSG00000106571.15	ENST00000678429.1	8237	15	-633	260676	-633	-7	5prime_fragment	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGGAACATCAGCTTTT	8972	False	NA	-13	True	AATAAA	-19	NA	42228354	42221624	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_42223296_42227650
H1_mix_00079341	chr7	-	1856	2	FSM	ENSG00000106571.15	ENST00000428534.2	1765	2	-110	19	-110	-19	multi-exon	FALSE	canonical	3	70	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTACTTGGCTTCAGGA	NA	False	NA	-25	True	AATAAA	-7	NA	42237980	42221636	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_42223296_42237783
H1_mix_00079342	chr7	-	896	9	NNC	ENSG00000106588.12	novel	1453	9	NA	NA	0	53899	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3558.11135822082	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGGTTGTAATCCTAGTC	23	False	NA	NA	False	AAAAAG	-1	NA	42932154	42862928	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_42862962_42917411_42917691_42917777_42917836_42921857_42921932_42923324_42923407_42924674_42924798_42926535_42926669_42927382_42927460_42932117
H1_mix_00079343	chr7	-	2873	2	FSM	ENSG00000136197.14	ENST00000447342.5	1823	2	0	-1050	0	1048	multi-exon	FALSE	canonical	3	48	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTGCAATTAAATGTACTA	-39	True	NA	NA	False	AGTAAA	-7	NA	42912090	42908224	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_42910922_42911914
H1_mix_00079344	chr7	-	2081	2	FSM	ENSG00000136197.14	ENST00000438029.1	1743	2	7	-345	7	-2	multi-exon	FALSE	canonical	3	9	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGCCTGTTTTTCATTGT	148	False	NA	-5	True	ATTAAA	-15	NA	42911903	42909276	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_42910922_42911467
H1_mix_00079345	chr7	-	1629	9	FSM	ENSG00000106588.12	ENST00000436986.5	1453	9	0	-176	0	122	multi-exon	FALSE	canonical	3	45	junction_8	4662.6187317322	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTAATTTGGTTTACAGAA	23	False	NA	NA	False	GATAAA	-3	NA	42932154	42916705	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_42917691_42917777_42917836_42921857_42921932_42923324_42923407_42924674_42924798_42926535_42926669_42927382_42927460_42931095_42931156_42932117
H1_mix_00079346	chr7	-	1434	8	FSM	ENSG00000106588.12	ENST00000223321.9	1434	8	0	0	0	0	multi-exon	FALSE	canonical	3	9757	junction_7	587.92537357896	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGCTTAAGGCTCTTGT	3	True	NA	-5	True	AATAAA	-24	NA	42932174	42916860	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_42917691_42917777_42917836_42921857_42921932_42923324_42923407_42924674_42924798_42926535_42926669_42927382_42927460_42932117
H1_mix_00079347	chr7	-	2784	7	FSM	ENSG00000106588.12	ENST00000678407.1	2784	7	0	0	0	0	multi-exon	FALSE	canonical	3	9757	junction_6	600.195361713353	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATAAGTGCTTGAAATAAA	3	True	NA	-48	True	TTTAAA	-12	NA	42932174	42916903	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_42917691_42917777_42917836_42921857_42923407_42924674_42924798_42926535_42926669_42927382_42927460_42932117
H1_mix_00079349	chr7	-	5365	7	FSM	ENSG00000106588.12	ENST00000677139.1	5365	7	0	0	0	0	multi-exon	FALSE	canonical	3	9757	junction_6	629.680253956103	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTAAAGGAACCCGGGTT	-5	True	NA	29	True	NA	NA	NA	42932182	42916959	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_42917691_42917777_42921932_42923324_42923407_42924674_42924798_42926535_42926669_42927382_42927460_42932117
H1_mix_00079350	chr7	-	683	6	FSM	ENSG00000106588.12	ENST00000445517.1	683	6	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_5	4257.74384386849	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTCCAGCCTTTTAGGAG	-8	True	NA	-40	True	AATAAA	-12	NA	42932185	42917412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_42917691_42917777_42917836_42921857_42921932_42923324_42923407_42924674_42924798_42932117
H1_mix_00079352	chr7	-	1741	7	FSM	ENSG00000106603.20	ENST00000415076.6	1737	7	0	-4	0	4	multi-exon	FALSE	canonical	2	5	junction_1	369.402858979492	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGAATGTCATTCTTT	-7	True	NA	0	True	AATAAA	-19	NA	43729513	43608451	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_43609496_43639448_43639682_43640572_43640650_43645250_43645400_43647534_43647635_43648599_43648653_43729428
H1_mix_00079354	chr7	-	2135	3	FSM	ENSG00000106603.20	ENST00000490251.1	2135	3	0	0	0	0	multi-exon	FALSE	canonical	3	957	junction_2	64.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGACCAGCCTGGCCAAC	2336	False	NA	NA	False	NA	NA	NA	43646425	43638798	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_43639682_43640572_43640650_43645250
H1_mix_00079355	chr7	-	2690	5	FSM	ENSG00000106603.20	ENST00000395879.5	2448	5	0	-242	0	-216	multi-exon	FALSE	canonical	3	928	junction_3	65.3720123600307	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCAACCATCTGCCCAGT	NA	False	NA	NA	False	NA	NA	NA	43650296	43639014	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_43639682_43640572_43640650_43645250_43645400_43647534_43647635_43648599
H1_mix_00079356	chr7	-	1327	7	FSM	ENSG00000106603.20	ENST00000310564.10	1085	7	0	-242	0	-216	multi-exon	FALSE	canonical	3	15	junction_5	462.800532987305	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCAACCATCTGCCCAGT	17	True	NA	NA	False	NA	NA	NA	43729489	43639014	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_43639682_43640572_43640650_43645250_43645400_43647534_43647635_43648599_43648653_43650492_43650713_43729428
H1_mix_00079357	chr7	-	1141	6	FSM	ENSG00000106603.20	ENST00000223336.11	899	6	0	-242	0	-216	multi-exon	FALSE	canonical	3	814	junction_5	96.5248154621391	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCAACCATCTGCCCAGT	-17	True	NA	NA	False	NA	NA	NA	43729523	43639014	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_43639682_43640572_43640650_43645250_43645400_43647534_43647635_43648599_43648653_43729428
H1_mix_00079360	chr7	-	667	4	FSM	ENSG00000062582.14	ENST00000317534.6	667	4	0	0	0	0	multi-exon	FALSE	canonical	3	902	junction_3	180.392781328842	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCCTCTCTGTTTTTAC	-9	True	NA	-9	True	AATAAA	-15	NA	43869517	43866557	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_43866983_43868962_43869075_43869307_43869377_43869456
H1_mix_00079361	chr7	-	743	3	FSM	ENSG00000062582.14	ENST00000418740.5	743	3	0	0	0	0	multi-exon	FALSE	canonical	3	1259	junction_2	23.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTCTTGCCTCTCTGTTT	-9	True	NA	-13	True	AATAAA	-11	NA	43869517	43866561	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_43866983_43868962_43869075_43869307
H1_mix_00079364	chr7	-	3563	5	FSM	ENSG00000106608.17	ENST00000402306.7	3563	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	30.6349473640808	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGCACAAGTGATGGTA	-7	True	NA	-26	True	AATAAA	-16	NA	43906615	43875912	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_43879261_43881658_43881698_43881906_43881958_43887414_43887486_43906561
H1_mix_00079365	chr7	-	3606	6	FSM	ENSG00000106608.17	ENST00000443736.5	3596	6	0	-10	0	-9	multi-exon	FALSE	canonical	3	14	junction_5	32.8913362452789	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGATGGTAATGGGCAGGT	-18	True	NA	-16	True	AATAAA	-26	NA	43906626	43875902	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_43879261_43881658_43881698_43881906_43881958_43887414_43887486_43887789_43887812_43906561
H1_mix_00079369	chr7	-	2150	4	ISM	ENSG00000214783.9	ENST00000427076.5	6466	16	36	70956	36	-45511	5prime_fragment	FALSE	canonical	3	110	junction_1	190.222676531129	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCCGTCTCAAAAAAAAAAAA	50	False	NA	NA	False	NA	NA	NA	44019113	44011850	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_44013680_44014605_44014784_44016433_44016524_44019060
H1_mix_00079370	chr7	-	3083	3	FSM	ENSG00000272655.2	ENST00000326391.6	1422	3	57	-1718	0	1718	multi-exon	FALSE	canonical	3	115	junction_1	200.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAAAAAAAAAAAAGAA	50	False	NA	NA	False	NA	NA	NA	44019113	44011843	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44014784_44016433_44016524_44019060
H1_mix_00079371	chr7	-	837	3	FSM	ENSG00000164708.6	ENST00000297283.4	837	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	3.5	721	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGAGTCCAGCGCAGCC	-1	True	NA	0	True	AATAAA	-17	NA	44065567	44062726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44062931_44064831_44065013_44065115
H1_mix_00079372	chr7	-	2806	11	FSM	ENSG00000122678.17	ENST00000242248.10	2806	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	8.63944442658207	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGGCCTCTCCCCACAG	-30	True	NA	-13	True	AATAGA	-22	NA	44082530	44072061	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44073378_44073624_44073709_44073782_44074026_44074130_44074234_44074397_44074531_44076508_44076630_44078739_44078812_44079570_44079742_44079860_44079960_44080732_44080917_44082250
H1_mix_00079373	chr7	-	2597	11	NIC	ENSG00000122678.17	novel	2806	11	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	7.91264810287934	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTCTTGGGGTGCAGT	0	True	NA	NA	False	ATTAAA	-26	NA	44082453	44072246	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_44073431_44073624_44073709_44073782_44074026_44074130_44074234_44074397_44074531_44076508_44076630_44078739_44078812_44079570_44079742_44079860_44079960_44080732_44080917_44082250
H1_mix_00079374	chr7	-	1649	6	FSM	ENSG00000122678.17	ENST00000492605.5	1649	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	19.0682982984848	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGGGAAGGAATGAATTCG	22	True	NA	NA	False	NA	NA	NA	44082478	44075718	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44076630_44078755_44078812_44079570_44079742_44079860_44079960_44080732_44080917_44082250
H1_mix_00079375	chr7	-	536	2	FSM	ENSG00000106628.12	ENST00000489883.1	528	2	0	-8	0	0	multi-exon	FALSE	canonical	3	1708	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGGGCACTCTGGCTAT	8103	False	NA	-17	True	AATAAA	-30	NA	44115564	44114679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44114946_44115294
H1_mix_00079376	chr7	-	1609	11	FSM	ENSG00000106628.12	ENST00000610533.6	1609	11	0	0	0	0	multi-exon	FALSE	canonical	3	909	junction_10	252.650034632889	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGGGCACTCTGGCTAT	-7	True	NA	-17	True	AATAAA	-30	NA	44123548	44114679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44114946_44115294_44115397_44115765_44115894_44116114_44116273_44116429_44116511_44116816_44117016_44117132_44117248_44117618_44117743_44117942_44118065_44121833_44122110_44123510
H1_mix_00079378	chr7	-	1682	10	FSM	ENSG00000106628.12	ENST00000223361.7	1597	10	-85	0	-85	0	multi-exon	FALSE	canonical	3	43	junction_2	508.901212854169	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGATGCGAGCCTTGAG	1386	False	NA	-36	True	AATAAA	-11	NA	44122281	44114698	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44114946_44115294_44115355_44115765_44115894_44116114_44116273_44116429_44116511_44116816_44117016_44117132_44117248_44117618_44117743_44117942_44118065_44121833
H1_mix_00079379	chr7	-	1659	11	FSM	ENSG00000106628.12	ENST00000452185.5	1659	11	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_10	484.63165393936	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAAAAAAGTGGTTTTGAC	11	True	NA	-31	True	GGGGCT	-11	NA	44123530	44114784	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44114946_44115294_44115397_44115765_44115894_44116114_44116273_44116429_44116511_44116816_44117016_44117132_44117248_44117618_44117743_44117942_44118065_44121833_44122283_44123510
H1_mix_00079384	chr7	-	651	6	FSM	ENSG00000106631.8	ENST00000457314.5	646	6	0	-5	0	0	multi-exon	FALSE	canonical	3	33	junction_5	53.4288311681998	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGTGGTGTCTTGTCTG	468	False	NA	-4	True	AATAAA	-20	NA	44141074	44138863	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44139023_44139520_44139570_44139781_44139861_44140322_44140428_44140711_44140857_44140960
H1_mix_00079385	chr7	-	612	7	FSM	ENSG00000106631.8	ENST00000223364.7	612	7	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_6	26.1512693552127	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGTGGTGTCTTGTCTG	-2	True	NA	-4	True	AATAAA	-20	NA	44141332	44138863	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44139023_44139520_44139570_44139781_44139861_44140322_44140428_44140711_44140788_44140960_44141075_44141302
H1_mix_00079386	chr7	-	1643	2	FSM	ENSG00000106633.18	ENST00000459642.1	1641	2	0	-2	0	2	multi-exon	FALSE	canonical	3	67	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTCCACTGTTCTTTGA	NA	False	NA	0	True	ATTAAA	-23	NA	44146129	44144270	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44145281_44145496
H1_mix_00079387	chr7	-	1315	3	FSM	ENSG00000106633.18	ENST00000336642.9	1311	3	0	-4	0	2	multi-exon	FALSE	canonical	3	46	junction_2	10.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTCCACTGTTCTTTGA	NA	False	NA	0	True	ATTAAA	-23	NA	44146144	44144270	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44145281_44145496_44145731_44146073
H1_mix_00079390	chr7	-	936	5	FSM	ENSG00000015676.18	ENST00000464812.1	811	5	-125	0	-73	0	multi-exon	TRUE	canonical	3	6	junction_3	181.558530507382	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGGGAAGCTCACCCACA	170	False	NA	NA	False	NA	NA	NA	44490731	44404512	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44404584_44427570_44427704_44484967_44485285_44485530_44485623_44490408
H1_mix_00079392	chr7	-	1853	14	FSM	ENSG00000136271.11	ENST00000446987.5	1853	14	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_10	78.1776916983991	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGCCTCCAGCATATG	20	True	NA	-17	True	AATAAA	-17	NA	44573895	44565803	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44566080_44566447_44566525_44568117_44568224_44568902_44568993_44569129_44569204_44569808_44569904_44570014_44570129_44570757_44570878_44571491_44571737_44572346_44572438_44572562_44572745_44572889_44573051_44573582_44573745_44573835
H1_mix_00079394	chr7	-	2403	5	FSM	ENSG00000158604.15	ENST00000457408.7	2294	5	21	-130	0	130	multi-exon	FALSE	canonical	0	0	junction_1	215.65757000393	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGGCATGATCTTGGC	11	True	NA	NA	False	NA	NA	NA	44582210	44577763	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44579629_44581092_44581240_44581448_44581575_44581722_44581824_44582046
H1_mix_00079397	chr7	-	1968	4	FSM	ENSG00000158604.15	ENST00000481238.1	1755	4	-213	0	-157	0	multi-exon	FALSE	canonical	3	364	junction_1	78.9697551105626	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATAGCCATTGCCTACCT	NA	False	NA	-8	True	AATAAA	-27	NA	44582444	44579896	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44581240_44581448_44581575_44581722_44581824_44582046
H1_mix_00079399	chr7	-	3808	5	FSM	ENSG00000105968.19	ENST00000222690.10	3804	5	0	-4	0	4	multi-exon	FALSE	canonical	3	94	junction_1	1007.59475360881	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGACTAAATATTTCTGG	1	True	NA	0	True	ATTAAA	-22	NA	44848077	44826786	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44830164_44835528_44835659_44840898_44841013_44843276_44843355_44847968
H1_mix_00079400	chr7	-	3026	5	FSM	ENSG00000105968.19	ENST00000308153.9	3026	5	0	0	0	0	multi-exon	FALSE	canonical	3	2098	junction_4	183.778909290484	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTTGTTCTGTTTTGC	-9	True	NA	-2	True	TATAAA	-18	NA	44848087	44831977	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44834563_44835528_44835659_44840898_44841013_44843276_44843355_44847968
H1_mix_00079401	chr7	-	596	4	FSM	ENSG00000105968.19	ENST00000349299.7	596	4	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	1040.01185890675	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTCAAAACTGTTCTG	57	False	NA	-22	True	GATAAA	-20	NA	44848021	44834227	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44834563_44835528_44835659_44843276_44843355_44847968
H1_mix_00079402	chr7	-	687	4	FSM	ENSG00000105968.19	ENST00000350771.7	687	4	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_3	1123.51393207007	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTCAAAACTGTTCTG	2	True	NA	-22	True	GATAAA	-20	NA	44848076	44834227	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44834563_44835528_44835659_44840898_44841013_44847968
H1_mix_00079405	chr7	-	9230	1	FSM	ENSG00000146676.10	ENST00000395699.5	9232	1	8	-6	8	6	mono-exon	FALSE	NA	NA	NA	NA	NA	230	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTGCTTGTGTCTCTAA	-21	True	NA	0	True	AATAAA	-24	NA	44885522	44876292	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44876300_44885500
H1_mix_00079406	chr7	-	735	4	FSM	ENSG00000232956.10	ENST00000579383.6	732	4	0	-3	0	1	multi-exon	FALSE	canonical	3	30	junction_2	224.423706412669	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTCTTGCCTGTTTTTTA	-20	True	NA	-2	True	AATAAA	-21	NA	44986656	44983021	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44983323_44983821_44984047_44986020_44986098_44986524
H1_mix_00079408	chr7	-	1632	3	FSM	ENSG00000232956.10	ENST00000582727.3	1637	3	6	-1	-5	1	multi-exon	FALSE	canonical	3	409	junction_1	55	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTCTTGCCTGTTTTTTA	156	False	NA	-2	True	AATAAA	-21	NA	44986674	44983021	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44984427_44986020_44986098_44986524
H1_mix_00079409	chr7	-	3245	2	FSM	ENSG00000232956.10	ENST00000667119.1	3228	2	0	-17	0	1	multi-exon	FALSE	canonical	3	519	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTCTTGCCTGTTTTTTA	-2	True	NA	-2	True	AATAAA	-21	NA	44986693	44983021	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44986098_44986524
H1_mix_00079410	chr7	-	1347	4	FSM	ENSG00000232956.10	ENST00000668580.1	1346	4	0	-1	0	1	multi-exon	FALSE	canonical	3	409	junction_2	47.6818157745231	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTCTTGCCTGTTTTTTA	131	False	NA	-2	True	AATAAA	-21	NA	44986699	44983021	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44984047_44984356_44984427_44986020_44986098_44986524
H1_mix_00079411	chr7	-	983	5	FSM	ENSG00000232956.10	ENST00000578968.6	986	5	0	3	0	1	multi-exon	FALSE	canonical	3	409	junction_3	44.6682213659778	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTCTTGCCTGTTTTTTA	-4	True	NA	-2	True	AATAAA	-21	NA	44986834	44983021	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44983323_44983821_44984047_44984356_44984427_44986020_44986098_44986524
H1_mix_00079412	chr7	-	3014	3	FSM	ENSG00000232956.10	ENST00000580528.2	2998	3	0	-16	0	1	multi-exon	FALSE	canonical	3	492	junction_1	13.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTCTTGCCTGTTTTTTA	NA	False	NA	-2	True	AATAAA	-21	NA	44986961	44983021	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44983323_44983821_44986098_44986524
H1_mix_00079414	chr7	-	749	5	Antisense	novelGene_ENSG00000136280.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	13.5462171841441	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTCTGCATGAATTATTC	232	False	NA	3	True	AATAAA	-25	NA	44999763	44988761	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr7_-_44989018_44992612_44992850_44995028_44995145_44999279_44999374_44999717
H1_mix_00079416	chr7	-	2190	9	FSM	ENSG00000136270.14	ENST00000361278.7	1917	9	12	-285	0	285	multi-exon	FALSE	canonical	3	58	junction_6	217.327769452042	1390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGATGGAGCTGTGGCT	-3	True	NA	NA	False	NA	NA	NA	45111706	45099814	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_45100427_45101257_45101373_45101502_45101615_45101824_45102071_45102346_45102492_45103332_45103444_45105440_45105765_45108826_45109288_45111642
H1_mix_00079417	chr7	-	2226	11	FSM	ENSG00000136270.14	ENST00000258770.8	2226	11	0	0	0	0	multi-exon	FALSE	canonical	3	522	junction_8	70.4204515748089	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTCTGTCTGCTTTG	6	True	NA	-2	True	NA	NA	NA	45111697	45100099	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_45100427_45101257_45101373_45101502_45101615_45101824_45102071_45102346_45102492_45103332_45103444_45104098_45104257_45104537_45104710_45105440_45105765_45108826_45109288_45111642
H1_mix_00079418	chr7	-	3409	9	FSM	ENSG00000136270.14	ENST00000495973.5	3409	9	0	0	0	0	multi-exon	FALSE	canonical	3	522	junction_8	69.3253200497481	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACTTGTCTGTCTGCTTT	4239	False	NA	-3	True	NA	NA	NA	45107464	45100100	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_45100427_45101257_45101373_45101502_45101615_45101824_45102071_45102346_45102492_45103332_45103444_45104098_45104257_45104537_45104710_45105440
H1_mix_00079424	chr7	-	1252	11	ISM	ENSG00000214765.9	ENST00000338231.8	1716	13	10841	4	1295	0	3prime_fragment	FALSE	canonical	3	25	junction_1	50.042082290808	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTTATCATTGCATCCT	NA	False	NA	NA	False	AATAAA	-23	NA	45758177	45723787	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_45724024_45724352_45724481_45726183_45726237_45728177_45728314_45736786_45736911_45744996_45745049_45747214_45747312_45748625_45748715_45751528_45751647_45756908_45756993_45758042
H1_mix_00079425	chr7	-	3003	14	FSM	ENSG00000214765.9	ENST00000429741.5	3006	14	0	3	0	-2	multi-exon	FALSE	canonical	1	2	junction_2	62.6523232567433	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAACTTATCATTGCATC	21	True	NA	NA	False	AATAAA	-21	NA	45768954	45723789	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_45724024_45724352_45725716_45726183_45726237_45728177_45728314_45736786_45736911_45744996_45745049_45746826_45746949_45747214_45747312_45748625_45748715_45751528_45751647_45756908_45756993_45758042_45758178_45759073_45759175_45768659
H1_mix_00079427	chr7	-	4315	11	FSM	ENSG00000214765.9	ENST00000686085.1	1822	11	50	-2543	0	0	multi-exon	FALSE	canonical	3	74	junction_1	26.1426854014655	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTTATCATTGCATCCT	11	True	NA	NA	False	AATAAA	-23	NA	45768964	45723787	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_45726862_45728177_45728314_45736786_45736911_45744996_45745049_45747214_45747312_45748625_45748715_45751528_45751647_45756908_45756993_45758042_45758178_45759073_45759175_45768659
H1_mix_00079428	chr7	-	2227	11	FSM	ENSG00000214765.9	ENST00000691119.1	2281	11	54	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	43.667035621851	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTGTGTGTGTGTCTT	11	True	NA	-2	True	NA	NA	NA	45768964	45726332	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_45727319_45728177_45728314_45736786_45736911_45744996_45745049_45747214_45747312_45748625_45748715_45751528_45751647_45756908_45756993_45758042_45758178_45759073_45759175_45768659
H1_mix_00079430	chr7	-	5573	2	FSM	ENSG00000214765.9	ENST00000428867.1	593	2	-4842	-138	1498	138	multi-exon	FALSE	canonical	3	136	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCATTCATGAGGATTT	4661	False	NA	NA	False	NA	NA	NA	45764314	45757845	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_45758178_45759073
H1_mix_00079431	chr7	-	2632	5	FSM	ENSG00000146674.16	ENST00000613132.5	2613	5	0	-19	0	19	multi-exon	FALSE	canonical	3	63	junction_1	8.26135582092915	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCATAACCACAAATGTTT	-1	True	NA	NA	False	AATAAA	-39	NA	45921272	45912225	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_45913835_45914804_45914946_45916547_45916668_45917212_45917440_45920737
H1_mix_00079433	chr7	-	7844	31	FSM	ENSG00000136205.17	ENST00000311160.14	7585	31	-266	7	181	-7	multi-exon	FALSE	canonical	3	38	junction_30	18.2879438124927	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTAAGCCTCCGTGAGAC	245	False	NA	-23	True	AATAAA	-10	NA	47582377	47275160	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_47278221_47280163_47280191_47280285_47280355_47283696_47283866_47291954_47292033_47292827_47292906_47293732_47293829_47297081_47297214_47302185_47302273_47302949_47303585_47304831_47305004_47344754_47344839_47344923_47345039_47346186_47346357_47368364_47369622_47396799_47396905_47400392_47400459_47400784_47400915_47411726_47411803_47413936_47413998_47415093_47415207_47424100_47424185_47428311_47428377_47435281_47435405_47437262_47437314_47439486_47439659_47442002_47442056_47481102_47481142_47506906_47506945_47529035_47529148_47582050
H1_mix_00079434	chr7	-	7754	31	NIC	ENSG00000136205.17	novel	7585	31	NA	NA	-95	3	combination_of_known_junctions	TRUE	canonical	2	8	junction_30	20.4869606226877	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGAGACGGTATTTGTG	NA	False	NA	-13	True	AATAAA	-20	NA	47582653	47275150	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_47278221_47280163_47280191_47280285_47280355_47283696_47283866_47291954_47292033_47292827_47292906_47293732_47293829_47297081_47297214_47302185_47302273_47302949_47303585_47304831_47305004_47344754_47344839_47344923_47345039_47346186_47346357_47368364_47369622_47396799_47396905_47400392_47400459_47400784_47400915_47411726_47411803_47413936_47413998_47415093_47415207_47424100_47424185_47428311_47428377_47435281_47435405_47437262_47437314_47439486_47439659_47442002_47442056_47481102_47481142_47506906_47506945_47529035_47529148_47582426
H1_mix_00079439	chr7	-	579	5	FSM	ENSG00000136273.13	ENST00000446009.1	579	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	52.4517635547176	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGTGTTGTGGAAAAAAT	2	True	NA	NA	False	NA	NA	NA	47979553	47975654	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_47975688_47976729_47976838_47978416_47978594_47978688_47978817_47979420
H1_mix_00079440	chr7	-	984	3	FSM	ENSG00000136273.13	ENST00000468868.1	548	3	-259	-177	-197	177	multi-exon	FALSE	canonical	3	121	junction_2	0.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTCATCTGCTATAATAA	NA	False	NA	NA	False	NA	NA	NA	47979812	47978082	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_47978594_47978688_47978817_47979467
H1_mix_00079441	chr7	-	10243	3	FSM	ENSG00000132436.12	ENST00000615084.4	3368	3	66	-6941	0	6940	multi-exon	FALSE	canonical	3	6	junction_2	7	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGCCTGTGGGATCTGA	25	False	NA	NA	False	NA	NA	NA	50450324	50437187	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_50447298_50448180_50448290_50450300
H1_mix_00079442	chr7	-	10404	4	FSM	ENSG00000132436.12	ENST00000395556.6	3485	4	26	-6945	0	6940	multi-exon	FALSE	canonical	3	11	junction_2	9.03081145609604	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGCCTGTGGGATCTGA	25	False	NA	NA	False	NA	NA	NA	50450324	50437187	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_50447298_50448180_50448290_50449562_50449724_50450300
H1_mix_00079443	chr7	-	10198	2	FSM	ENSG00000132436.12	ENST00000617389.4	3259	2	2	-6941	0	6940	multi-exon	FALSE	canonical	1	1	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGCCTGTGGGATCTGA	NA	False	NA	NA	False	NA	NA	NA	50450388	50437187	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_50447298_50450300
H1_mix_00079444	chr7	-	3935	4	FSM	ENSG00000132436.12	ENST00000433017.6	3930	4	0	-5	0	0	multi-exon	FALSE	canonical	3	8	junction_2	10.2089285540757	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTTGCATTCTAAATTGT	-1	True	NA	-13	True	ATTAAA	-24	NA	50450350	50444127	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_50447298_50448180_50448290_50449117_50449724_50450300
H1_mix_00079447	chr7	-	5375	18	NIC	ENSG00000106070.20	novel	5468	19	NA	NA	2	0	combination_of_known_junctions	TRUE	canonical	3	31	junction_17	201.32558972864	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCTGGTGATATCTGTT	-24	True	NA	-5	True	AATAAA	-26	NA	50782908	50590062	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50732271_50732369_50755886_50756057_50782423
H1_mix_00079448	chr7	-	5083	16	NIC	ENSG00000106070.20	novel	2299	18	NA	NA	11	-2	combination_of_known_splicesites	FALSE	canonical	3	45	junction_15	153.147800796776	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTGCTGGTGATATCTG	-1	True	NA	-7	True	AATAAA	-24	NA	50782885	50590064	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50782423
H1_mix_00079449	chr7	-	5471	19	FSM	ENSG00000106070.20	ENST00000401949.6	5468	19	0	-3	0	-2	multi-exon	FALSE	canonical	2	5	junction_18	229.958933531862	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTGCTGGTGATATCTG	-12	True	NA	-7	True	AATAAA	-24	NA	50782896	50590064	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50732271_50732369_50755886_50756057_50780626_50780737_50782423
H1_mix_00079450	chr7	-	5435	18	FSM	ENSG00000106070.20	ENST00000644769.1	5431	18	0	-4	0	-2	multi-exon	FALSE	canonical	2	5	junction_17	221.067667230669	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTGCTGGTGATATCTG	480	False	NA	-7	True	AATAAA	-24	NA	50792969	50590064	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50710874_50710991_50755886_50756057_50792441
H1_mix_00079451	chr7	-	5096	18	NIC	ENSG00000106070.20	novel	5468	19	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	125	junction_16	183.20735317136	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTCTATTGCTGGTGA	12	True	NA	-13	True	AATAAA	-18	NA	50793437	50590070	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50732271_50732369_50755886_50756057_50793223
H1_mix_00079452	chr7	-	5030	17	FSM	ENSG00000106070.20	ENST00000335866.7	5032	17	0	2	0	-2	multi-exon	FALSE	canonical	3	172	junction_16	153.544769021123	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTGCTGGTGATATCTG	-13	True	NA	-7	True	AATAAA	-24	NA	50793462	50590064	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50755886_50756057_50793223
H1_mix_00079453	chr7	-	2050	15	FSM	ENSG00000106070.20	ENST00000357271.9	2050	15	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_8	196.627172328646	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTGTATTGATCACT	NA	False	NA	-20	True	ATTAAA	-14	NA	50732353	50592579	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50732271
H1_mix_00079454	chr7	-	4899	17	NIC	ENSG00000106070.20	novel	2156	18	NA	NA	1	-32	combination_of_known_splicesites	FALSE	canonical	3	18	junction_16	188.669922997149	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTCTTGTAATTAGAAAT	18	False	NA	-53	True	NA	NA	NA	50793431	50590110	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50710874_50710991_50793223
H1_mix_00079455	chr7	-	2599	18	NIC	ENSG00000106070.20	novel	5431	18	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_16	201.341126288069	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTGTATTGATCACT	19	False	NA	-20	True	ATTAAA	-14	NA	50793430	50592579	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50710874_50710991_50755886_50756057_50793223
H1_mix_00079456	chr7	-	2319	16	FSM	ENSG00000106070.20	ENST00000402497.6	2319	16	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_15	133.612208357703	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTGTATTGATCACT	13	True	NA	-20	True	ATTAAA	-14	NA	50793436	50592579	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50793223
H1_mix_00079459	chr7	-	4783	12	FSM	ENSG00000106078.19	ENST00000431948.5	4780	12	0	-3	0	3	multi-exon	FALSE	canonical	2	6	junction_2	16.9344872819974	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGTGAATTTCATACTA	2688	False	NA	2	True	AATAAA	-20	NA	51190943	51016208	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_51017569_51025108_51025373_51026545_51026666_51027711_51029592_51030811_51030910_51043382_51043693_51083057_51083229_51085165_51085305_51136157_51136332_51172455_51172531_51184101_51184200_51190849
H1_mix_00079460	chr7	-	5304	13	FSM	ENSG00000106078.19	ENST00000265136.12	5301	13	0	-3	0	3	multi-exon	FALSE	canonical	2	5	junction_6	20.9727005096308	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGTGAATTTCATACTA	-20	True	NA	2	True	AATAAA	-20	NA	51316809	51016208	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_51017569_51025108_51025373_51026545_51026666_51027711_51029592_51030811_51030910_51043382_51043693_51085165_51085305_51136157_51136332_51184101_51184200_51190849_51191079_51193378_51193590_51219740_51219945_51316592
H1_mix_00079461	chr7	-	5428	14	FSM	ENSG00000106078.19	ENST00000395542.6	5339	14	-85	-4	-85	3	multi-exon	FALSE	canonical	3	37	junction_6	11.3643270365685	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGTGAATTTCATACTA	8	True	NA	2	True	AATAAA	-20	NA	51316903	51016208	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_51017569_51025108_51025232_51026545_51026666_51027711_51029592_51030811_51030910_51043382_51043693_51083057_51083229_51085165_51085305_51136157_51136332_51184101_51184200_51190849_51191079_51193378_51193590_51219740_51219945_51316592
H1_mix_00079462	chr7	-	5569	14	NIC	ENSG00000106078.19	novel	5339	14	NA	NA	-85	3	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	16.7448658562671	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGTGAATTTCATACTA	8	True	NA	2	True	AATAAA	-20	NA	51316903	51016208	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_51017569_51025108_51025373_51026545_51026666_51027711_51029592_51030811_51030910_51043382_51043693_51083057_51083229_51085165_51085305_51136157_51136332_51184101_51184200_51190849_51191079_51193378_51193590_51219740_51219945_51316592
H1_mix_00079463	chr7	-	466	4	FSM	ENSG00000132432.14	ENST00000395535.7	459	4	0	-7	0	7	multi-exon	FALSE	canonical	3	306	junction_3	1975.20536203763	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTCTGTCATAGATACT	NA	False	NA	-11	True	ATTAAA	-27	NA	54759246	54752242	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_54752421_54755778_54755882_54757494_54757595_54759161
H1_mix_00079464	chr7	-	425	4	FSM	ENSG00000132432.14	ENST00000352861.9	425	4	0	0	0	0	multi-exon	FALSE	canonical	3	2861	junction_3	770.798719943583	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATATCTCTTTTTTCTGT	-7	True	NA	-21	True	ATTAAA	-17	NA	54759211	54752252	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_54752421_54755778_54755882_54757494_54757595_54759157
H1_mix_00079465	chr7	-	516	4	FSM	ENSG00000132432.14	ENST00000450622.1	512	4	0	-4	0	0	multi-exon	FALSE	canonical	3	164	junction_3	2042.14413464541	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATATCTCTTTTTTCTGT	-1	True	NA	-21	True	ATTAAA	-17	NA	54759182	54752252	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_54752421_54755778_54755882_54757494_54757595_54759037
H1_mix_00079467	chr7	-	2076	9	NIC	ENSG00000146733.14	novel	1974	8	NA	NA	12	0	intron_retention	FALSE	canonical	3	14	junction_8	195.718827339119	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGATTTGTGGAATTTTCAG	-1	True	NA	-20	True	AATAAA	-21	NA	56051432	56011063	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_56011870_56015022_56015172_56017233_56017380_56019599_56019735_56021072_56021232_56031928_56032055_56033380_56033495_56033960_56034107_56051137
H1_mix_00079469	chr7	-	1842	8	NIC	ENSG00000146733.14	novel	2178	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	51	junction_7	176.81132570613	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACGGATTTGTGGAATTT	-12	True	NA	-24	True	AATAAA	-17	NA	56034171	56011067	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_56011870_56015022_56015172_56017233_56017380_56019599_56019735_56021072_56021232_56031928_56032055_56033380_56033495_56033960
H1_mix_00079470	chr7	-	2159	8	FSM	ENSG00000146733.14	ENST00000395471.7	2178	8	19	0	19	0	multi-exon	FALSE	canonical	3	102	junction_7	119.86182521077	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACGGATTTGTGGAATTT	-8	True	NA	-24	True	AATAAA	-17	NA	56051585	56011067	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_56011870_56015022_56015172_56017233_56017380_56019599_56019735_56021072_56021232_56031928_56032055_56033960_56034155_56051137
H1_mix_00079471	chr7	-	1096	4	Fusion	ENSG00000146733.14_ENSG00000185290.4	novel	2178	8	NA	NA	133	0	intron_retention	FALSE	non_canonical	0	0	junction_1	104.180399094818	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACGGATTTGTGGAATTT	127	False	NA	-24	True	AATAAA	-17	NA	56116284	56011067	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_-_56011870_56021118_56021232_56116014_56116129_56116217
H1_mix_00079475	chr7	-	454	1	FSM	ENSG00000224155.2	ENST00000417282.1	849	1	424	-29	424	29	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGAGTCACACATTTATG	NA	False	NA	NA	False	AAAACA	-22	NA	56305102	56304648	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_56304600_56305100
H1_mix_00079476	chr7	-	2799	3	NNC	ENSG00000173041.12	novel	769	3	NA	NA	-4	16499	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11	1742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCCAGTTGATTTCTTA	-6	True	NA	NA	False	NA	NA	NA	64563079	64503378	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_64503404_64519881_64522501_64562924
H1_mix_00079477	chr7	-	2993	4	FSM	ENSG00000173041.12	ENST00000309683.11	2993	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	7.11805216802087	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTATTGTGCATTCAATGA	2	True	NA	0	True	ATTAAA	-20	NA	64563071	64519877	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_64522501_64543706_64543803_64544305_64544433_64562924
H1_mix_00079478	chr7	-	769	3	FSM	ENSG00000173041.12	ENST00000476563.1	769	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	26	4046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTCTCAATCCTTAGTAA	67	False	NA	NA	False	NA	NA	NA	64563022	64521925	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_64522501_64543706_64543803_64562924
H1_mix_00079479	chr7	-	2159	4	FSM	ENSG00000173041.12	ENST00000447137.2	2159	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	22.647050335284	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGCCTCTGTTATTAAT	0	True	NA	NA	False	NA	NA	NA	64563041	64524698	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_64526518_64543706_64543803_64544305_64544433_64562924
H1_mix_00079480	chr7	-	787	3	FSM	ENSG00000189316.3	ENST00000340779.3	1062	3	260	15	260	-15	multi-exon	FALSE	canonical	0	0	junction_2	1	229	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAATGGGTTTCGTATCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	64889840	64888541	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_64888818_64889065_64889188_64889451
H1_mix_00079481	chr7	-	1397	1	FSM	ENSG00000270948.1	ENST00000605323.1	784	1	-1312	699	-1312	-699	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGACCTTGGCTTTC	NA	False	NA	NA	False	NA	NA	NA	64944238	64942841	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_64942800_64944200
H1_mix_00079482	chr7	-	9246	4	FSM	ENSG00000152926.16	ENST00000282869.11	9084	4	0	-162	0	162	multi-exon	FALSE	canonical	3	34	junction_3	23.2999761564017	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTGTCCTTTTTAAAAGA	8406	False	NA	NA	False	TATAAA	-26	NA	64991036	64971609	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_64979537_64981386_64981483_64981983_64982117_64989946
H1_mix_00079483	chr7	-	11680	5	NIC	ENSG00000152926.16	novel	9084	4	NA	NA	25	99	combination_of_known_splicesites	FALSE	canonical	3	34	junction_3	23.0366555732381	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGATCTCATTTTATTTC	0	True	NA	NA	False	NA	NA	NA	65006659	64971672	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_64979537_64981386_64981483_64981983_64982117_64989946_64993415_65006540
H1_mix_00079485	chr7	-	5116	4	NIC	ENSG00000152926.16	novel	9084	4	NA	NA	48	-294	combination_of_known_junctions	FALSE	canonical	3	42	junction_3	20.237478982214	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATAAAATCCTGAGTCTT	84	False	NA	-53	True	AATAAA	-16	NA	65006636	64974745	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_64979537_64981386_64981483_64981983_64982117_65006540
H1_mix_00079486	chr7	-	1675	3	FSM	ENSG00000152926.16	ENST00000487644.1	1837	3	0	162	0	-162	multi-exon	FALSE	canonical	3	42	junction_2	24.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCCTGTCTGTAGTACA	5	True	NA	NA	False	NA	NA	NA	65006684	64980084	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_64981483_64981983_64982117_65006540
H1_mix_00079487	chr7	-	3206	2	FSM	ENSG00000213462.5	ENST00000394323.3	3206	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCTCTCCGGCCTCCTG	2	True	NA	-1	True	AATAAA	-19	NA	65006687	64990355	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_64993415_65006540
H1_mix_00079488	chr7	-	1716	2	FSM	ENSG00000213462.5	ENST00000528878.1	1729	2	13	0	13	0	multi-exon	FALSE	canonical	3	10	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACCGTAAAATTTCCTT	NA	False	NA	NA	False	AATAAA	-34	NA	65006730	65003668	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_65005195_65006540
H1_mix_00079490	chr7	-	2007	11	FSM	ENSG00000169919.17	ENST00000447929.5	1983	11	0	-24	0	10	multi-exon	FALSE	canonical	3	31	junction_9	125.013759242733	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTCTGTGCGTCGTGCT	0	True	NA	-2	True	AATAAA	-39	NA	65982196	65960673	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_65961064_65964322_65964459_65967730_65967908_65970281_65970367_65974294_65974442_65974525_65974705_65974918_65975072_65976014_65976203_65979398_65979542_65980223_65980410_65981973
H1_mix_00079491	chr7	-	2209	12	FSM	ENSG00000169919.17	ENST00000304895.9	2199	12	0	-10	0	10	multi-exon	FALSE	canonical	3	109	junction_6	91.7428133515258	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTCTGTGCGTCGTGCT	10	True	NA	-2	True	AATAAA	-39	NA	65982213	65960673	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_65961064_65964322_65964459_65967730_65967908_65970281_65970367_65974294_65974442_65974525_65974705_65974918_65975072_65976014_65976203_65979398_65979542_65979726_65979912_65980223_65980410_65981973
H1_mix_00079492	chr7	-	1943	10	NIC	ENSG00000169919.17	novel	2199	12	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_3	111.357282853186	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTGAAATCATTTCTGT	1	True	NA	-12	True	AATAAA	-29	NA	65982195	65960683	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_65961064_65964322_65964459_65967730_65967908_65974294_65974442_65974525_65974705_65976014_65976203_65979398_65979542_65979726_65979912_65980223_65980410_65981973
H1_mix_00079493	chr7	-	2029	11	NIC	ENSG00000169919.17	novel	2199	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	225	junction_6	48.5052574470026	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTGAAATCATTTCTGT	0	True	NA	-12	True	AATAAA	-29	NA	65982196	65960683	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_65961064_65964322_65964459_65967730_65967908_65970281_65970367_65974294_65974442_65974525_65974705_65976014_65976203_65979398_65979542_65979726_65979912_65980223_65980410_65981973
H1_mix_00079496	chr7	-	4621	23	FSM	ENSG00000179406.9	ENST00000638517.1	4621	23	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	7.4744744694889	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGGCATGCACCTGTA	1966	False	NA	NA	False	AATAAA	-42	NA	66491616	66388324	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_66390251_66395878_66395957_66399691_66399796_66400321_66400438_66400922_66401028_66402456_66402546_66407289_66407365_66409059_66409245_66411614_66411703_66427948_66428041_66429678_66429758_66429883_66430018_66439134_66439305_66450070_66450237_66467681_66467720_66476258_66476328_66479008_66479097_66480393_66480449_66481540_66481600_66485094_66485154_66487948_66488039_66489937_66490108_66491030
H1_mix_00079498	chr7	-	489	1	FSM	ENSG00000231234.2	ENST00000438081.1	489	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTGTGCCTGACACTGT	NA	False	NA	NA	False	NA	NA	NA	66423893	66423404	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_66423400_66423900
H1_mix_00079500	chr7	-	1973	4	ISM	ENSG00000229180.8	ENST00000686269.1	1853	7	-53	22951	0	227	5prime_fragment	FALSE	canonical	3	58	junction_2	41.2148840428633	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGCGGGATCTCGGCAGG	3	True	NA	NA	False	NA	NA	NA	66592386	66553257	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_66554838_66560578_66560676_66573384_66573551_66592256
H1_mix_00079501	chr7	-	1797	4	ISM	ENSG00000229180.8	ENST00000686397.1	1520	5	-13	8634	7	0	5prime_fragment	FALSE	canonical	3	38	junction_3	33.0689515339624	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTTGAAAGATAGGCACAA	-8	True	NA	80	True	NA	NA	NA	66592356	66553484	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_66554838_66573384_66573551_66576754_66576933_66592256
H1_mix_00079502	chr7	-	1562	3	ISM	ENSG00000229180.8	ENST00000690339.1	824	4	18	8142	7	-80	5prime_fragment	FALSE	canonical	3	117	junction_1	16.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATGGATTTCATTTATT	10	True	NA	0	True	TATAAA	-26	NA	66592379	66553564	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_66554838_66573384_66573551_66592256
H1_mix_00079504	chr7	-	370	1	FSM	ENSG00000225573.4	ENST00000433398.1	370	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGCGCGTTGTCAATAAAG	NA	False	NA	NA	False	NA	NA	NA	66607107	66606737	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_66606700_66607100
H1_mix_00079505	chr7	-	237	2	Genic_Genomic	ENSG00000225573.4	novel	370	1	NA	NA	0	-30	multi-exon	FALSE	canonical	1	111	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGCGGCAGTGAGCGGT	NA	False	NA	NA	False	NA	NA	NA	66607107	66606767	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr7_-_66606932_66607034
H1_mix_00079506	chr7	-	569	1	FSM	ENSG00000272831.1	ENST00000607978.1	557	1	-52	40	-52	-40	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGTTAAAAACAGTAAATAC	176	False	NA	42	True	NA	NA	NA	66740437	66739868	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_66739900_66740400
H1_mix_00079508	chr7	-	1616	5	FSM	ENSG00000126524.11	ENST00000246868.7	1613	5	0	-3	0	3	multi-exon	FALSE	canonical	3	250	junction_3	15.1719313206988	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTAACTCCCTTTCTTT	11	True	NA	94	True	AATAAA	-45	NA	66995586	66987676	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_66988500_66991136_66991302_66993216_66993418_66994211_66994342_66995289
H1_mix_00079511	chr7	-	550	4	FSM	ENSG00000183166.11	ENST00000446128.1	550	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	29.6010510323911	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTAAGAATATTTTTTT	675	False	NA	NA	False	NA	NA	NA	72337751	72023656	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_72023770_72106150_72106295_72278685_72278811_72337583
H1_mix_00079512	chr7	-	2059	7	NNC	ENSG00000277149.5	novel	3117	14	NA	NA	92087	6	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_3	14.613540144522	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGAGTTTTTTTAAATTT	-1	True	NA	-2	True	AATAAA	-24	NA	72736087	72574506	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_72575720_72616671_72616840_72628886_72628998_72694686_72694823_72713620_72713799_72728821_72728932_72735944
H1_mix_00079513	chr7	-	3109	14	FSM	ENSG00000277149.5	ENST00000620995.5	3117	14	14	-6	0	6	multi-exon	FALSE	canonical	3	8	junction_10	37.4717250405528	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGAGTTTTTTTAAATTT	-1	True	NA	-2	True	AATAAA	-24	NA	72828186	72574506	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_72575720_72616671_72616840_72628886_72628998_72694686_72694823_72713620_72713799_72728821_72728932_72744483_72744602_72777415_72777534_72802399_72802523_72807065_72807357_72810470_72810666_72815379_72815482_72826854_72826986_72828071
H1_mix_00079514	chr7	-	1858	6	NNC	ENSG00000277149.5	novel	3117	14	NA	NA	92102	-2	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_4	30.4473315743761	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGCAGCATGAGTTTTT	14	False	NA	-10	True	AATAAA	-16	NA	72736072	72574514	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_72575720_72616671_72616840_72628886_72628998_72694686_72694823_72728821_72728932_72735944
H1_mix_00079515	chr7	-	1776	5	FSM	ENSG00000106133.18	ENST00000602348.5	1776	5	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	214.390414897681	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTCTTTTAATTTAGA	24	False	NA	NA	False	AATAAA	-25	NA	72954706	72947580	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_72948809_72948891_72949103_72949845_72949962_72950057_72950197_72954624
H1_mix_00079517	chr7	-	4187	10	NNC	ENSG00000106133.18	novel	1647	12	NA	NA	2	36	intron_retention	FALSE	canonical	2	5	junction_6	172.826038275987	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATGCCTGTCCTCTCCG	26	False	NA	NA	False	NA	NA	NA	72954704	72948448	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_72948598_72948667_72948809_72948891_72948981_72949102_72949492_72949845_72949962_72950057_72950197_72950285_72952296_72953325_72953431_72953510_72954480_72954624
H1_mix_00079518	chr7	-	1025	8	NNC	ENSG00000106133.18	novel	1647	12	NA	NA	0	36	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_1	177.529646848644	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATGCCTGTCCTCTCCG	24	False	NA	NA	False	NA	NA	NA	72954706	72948448	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_72948598_72948667_72948809_72948891_72948981_72949102_72949233_72949312_72949492_72949845_72949962_72950057_72950197_72954624
H1_mix_00079519	chr7	-	1385	10	FSM	ENSG00000106133.18	ENST00000457352.4	1385	10	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_8	173.693073985744	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGCTCCGGGCTCACTC	13	False	NA	NA	False	AAAAAG	-36	NA	72954717	72948484	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_72948598_72948667_72948809_72948891_72949103_72949312_72949492_72949845_72949962_72950057_72950197_72953325_72953431_72953510_72953678_72954358_72954480_72954624
H1_mix_00079528	chr7	-	906	7	FSM	ENSG00000174353.17	ENST00000569650.1	897	7	0	-9	0	0	multi-exon	FALSE	canonical	2	5	junction_1	43.5025542034284	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGATGGAGAAGGATGGG	156	False	NA	NA	False	NA	NA	NA	73005785	72998483	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_72998791_72999470_72999551_72999760_72999860_73000357_73000482_73003020_73003138_73003644_73003731_73005692
H1_mix_00079529	chr7	-	1716	6	FSM	ENSG00000174353.17	ENST00000448173.5	1716	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	33.1746891469988	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGATGGAGAAGGATGGG	26	False	NA	NA	False	NA	NA	NA	73005915	72998483	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_72999551_72999760_72999860_73000357_73000482_73003020_73003138_73003644_73003731_73005692
H1_mix_00079532	chr7	-	2336	10	FSM	ENSG00000130305.17	ENST00000438747.7	2336	10	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_8	51.6048614802429	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTTTTTCTTTTAATT	-13	True	NA	NA	False	AATAAA	-21	NA	73308826	73302515	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_73303530_73303599_73303741_73303825_73304037_73304229_73304409_73304746_73304863_73304958_73305098_73307393_73307503_73307582_73307758_73308430_73308554_73308697
H1_mix_00079533	chr7	-	2286	9	FSM	ENSG00000130305.17	ENST00000471461.5	2286	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	182.388321994584	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCACAGTTTTTTATTCT	-3	True	NA	-7	True	AATAAA	-22	NA	73308816	73303224	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_73303530_73303599_73303741_73303825_73304037_73304229_73304405_73304746_73304863_73304958_73305098_73307393_73307503_73307582_73308554_73308697
H1_mix_00079534	chr7	-	1677	9	FSM	ENSG00000130305.17	ENST00000252594.10	1672	9	0	-5	0	0	multi-exon	FALSE	canonical	3	490	junction_7	52.9691832578151	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCACAGTTTTTTATTCT	7	True	NA	-7	True	AATAAA	-22	NA	73308806	73303224	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_73303741_73303825_73304037_73304229_73304409_73304746_73304863_73304958_73305098_73307393_73307503_73307582_73307758_73308430_73308554_73308697
H1_mix_00079535	chr7	-	1612	10	FSM	ENSG00000130305.17	ENST00000310326.8	1602	10	0	-10	0	0	multi-exon	FALSE	canonical	3	69	junction_1	160.206887846872	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCACAGTTTTTTATTCT	-3	True	NA	-7	True	AATAAA	-22	NA	73308816	73303224	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_73303525_73303599_73303741_73303825_73304037_73304229_73304409_73304746_73304863_73304958_73305098_73307393_73307503_73307582_73307758_73308430_73308554_73308697
H1_mix_00079537	chr7	-	3362	10	ISM	ENSG00000009954.11	ENST00000404251.1	5428	19	55894	-1162	3	3	3prime_fragment	FALSE	canonical	2	20	junction_8	4.22806613120899	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGTGGCTGTTTGTGCT	NA	False	NA	-8	True	AATAAA	-34	NA	73466384	73440402	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_73442554_73442724_73442829_73443983_73444130_73447263_73447380_73449541_73449690_73450846_73450995_73459535_73459719_73462921_73463100_73465438_73465538_73466295
H1_mix_00079541	chr7	-	1648	6	FSM	ENSG00000106635.8	ENST00000482231.5	1638	6	7	-17	-3	0	multi-exon	FALSE	canonical	3	23	junction_5	119.643804687079	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATTTGAAATATGTCCTG	759	False	NA	-24	True	AATAGA	-17	NA	73557244	73536370	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_73537391_73537933_73538014_73539881_73540053_73543547_73543645_73552166_73552243_73557040
H1_mix_00079543	chr7	-	2358	7	FSM	ENSG00000106638.18	ENST00000459913.5	2358	7	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_6	67.5296231294089	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGGTTTCTGCCATCAA	438	False	NA	-52	True	AATAAA	-28	NA	73578269	73569659	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_73570973_73571188_73571342_73572843_73572971_73573319_73573472_73573937_73574123_73574382_73574514_73577972
H1_mix_00079548	chr7	-	3421	16	NIC	ENSG00000009950.16	novel	3252	17	NA	NA	0	5	intron_retention	FALSE	canonical	2	9	junction_6	14.0791413879619	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGCTGGTCAGTGTCTCA	-2	True	NA	-5	True	AATAAA	-27	NA	73624522	73593188	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_73593984_73594273_73594404_73595636_73595761_73595841_73595970_73596152_73596273_73596363_73596787_73596864_73596933_73597181_73597714_73599525_73599696_73605687_73605769_73605909_73606112_73606973_73607019_73607330_73607421_73607589_73607673_73616070_73616178_73624199
H1_mix_00079549	chr7	-	3265	17	FSM	ENSG00000009950.16	ENST00000313375.8	3252	17	0	-13	0	5	multi-exon	FALSE	canonical	3	13	junction_13	13.0240162776311	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGCTGGTCAGTGTCTCA	-2	True	NA	-5	True	AATAAA	-27	NA	73624522	73593188	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_73593984_73594273_73594404_73595636_73595761_73595841_73595970_73596152_73596273_73596363_73596480_73596638_73596790_73596864_73596933_73597181_73597714_73599525_73599696_73605687_73605769_73605909_73606112_73606973_73607019_73607330_73607421_73607589_73607673_73616070_73616178_73624199
H1_mix_00079552	chr7	-	2280	10	NIC	ENSG00000106089.12	novel	2102	10	NA	NA	2891	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	14.4589670583711	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCCTCTGTTGTAGATT	9774	False	NA	-7	True	AATAAA	-15	NA	73716735	73699209	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_73700485_73700729_73700932_73702844_73702983_73703754_73703829_73704147_73704257_73704349_73704424_73705149_73705225_73708588_73708689_73709044_73709123_73716580
H1_mix_00079554	chr7	-	1434	6	FSM	ENSG00000106077.19	ENST00000222800.8	1418	6	0	-16	0	16	multi-exon	FALSE	canonical	3	289	junction_1	42.9818566374232	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCACCACCAACGTCCC	3	True	NA	5	True	AATAAA	-32	NA	73738802	73736077	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_73736692_73736928_73737111_73737220_73737392_73737561_73737736_73738327_73738464_73738645
H1_mix_00079555	chr7	-	1272	5	FSM	ENSG00000106077.19	ENST00000395147.9	1277	5	0	5	0	-5	multi-exon	FALSE	canonical	3	51	junction_2	131.913797610409	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAGTCCTGGGCTGAGGT	7	True	NA	-16	True	AATAAA	-11	NA	73738832	73736098	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_73736692_73736928_73737111_73737561_73737736_73738327_73738464_73738645
H1_mix_00079556	chr7	-	1442	6	FSM	ENSG00000106077.19	ENST00000437775.7	1447	6	0	5	0	-5	multi-exon	FALSE	canonical	1	3	junction_5	132.32989080325	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAGTCCTGGGCTGAGGT	1	True	NA	-16	True	AATAAA	-11	NA	73738852	73736098	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_73736692_73736928_73737111_73737220_73737392_73737561_73737736_73738327_73738443_73738645
H1_mix_00079561	chr7	-	1277	1	FSM	ENSG00000165215.6	ENST00000395145.3	1274	1	0	-3	0	3	mono-exon	FALSE	NA	NA	NA	NA	NA	317	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGCCTCCTTGTTCCC	-1	True	NA	-2	True	AATAAA	-20	NA	73770270	73768993	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_73769000_73770300
H1_mix_00079562	chr7	-	2808	6	FSM	ENSG00000165171.11	ENST00000297873.9	922	6	0	-1886	0	1886	multi-exon	FALSE	canonical	3	30	junction_5	10.36532681588	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGACAATAAAATTTCCTC	8	True	NA	-34	True	NA	NA	NA	73842516	73832703	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_73835003_73840030_73840121_73840413_73840550_73841069_73841199_73842017_73842145_73842489
H1_mix_00079563	chr7	-	1611	12	NNC	ENSG00000049541.11	novel	1685	11	NA	NA	6	12487	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	380.190948110017	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCACACACTCTAGACCCG	NA	False	NA	NA	False	NA	NA	NA	74254452	74219011	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_74219048_74231664_74232217_74235531_74235646_74237361_74237443_74238922_74238989_74239937_74240096_74243145_74243247_74246661_74246764_74249011_74249119_74249738_74249781_74252428_74252499_74254270
H1_mix_00079564	chr7	-	1584	10	FSM	ENSG00000049541.11	ENST00000352131.7	1576	10	0	-8	0	8	multi-exon	FALSE	canonical	3	159	junction_6	370.175567288393	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGAAGCCTCGAGAAAAAC	8	True	NA	-14	True	AATAAA	-34	NA	74254389	74231490	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_74232217_74235531_74235646_74237361_74237443_74238922_74238989_74239937_74240096_74243145_74243247_74249011_74249119_74249738_74249781_74252428_74252499_74254270
H1_mix_00079565	chr7	-	1696	11	FSM	ENSG00000049541.11	ENST00000055077.8	1685	11	0	-11	0	8	multi-exon	FALSE	canonical	3	1031	junction_7	136.578365783165	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGAAGCCTCGAGAAAAAC	-2	True	NA	-14	True	AATAAA	-34	NA	74254399	74231490	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_74232217_74235531_74235646_74237361_74237443_74238922_74238989_74239937_74240096_74243145_74243247_74246661_74246764_74249011_74249119_74249738_74249781_74252428_74252499_74254270
H1_mix_00079566	chr7	-	1642	10	FSM	ENSG00000049541.11	ENST00000621097.4	1635	10	6	-13	6	8	multi-exon	FALSE	canonical	3	65	junction_7	399.264168869697	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGAAGCCTCGAGAAAAAC	NA	False	NA	-14	True	AATAAA	-34	NA	74254452	74231490	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_74232217_74235531_74235646_74237361_74237443_74238922_74238989_74239937_74240096_74243145_74243247_74246661_74246764_74249738_74249781_74252428_74252499_74254270
H1_mix_00079570	chr7	-	938	5	FSM	ENSG00000196275.16	ENST00000619775.1	1807	5	-70	939	-1	-939	multi-exon	FALSE	canonical	3	16	junction_1	86.9439474604184	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCTTTTCTTGCAGACC	NA	False	NA	NA	False	NA	NA	NA	74851606	74822472	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_74822808_74824932_74825053_74832804_74832944_74836279_74836384_74851366
H1_mix_00079572	chr7	-	578	3	FSM	ENSG00000196275.16	ENST00000614386.1	578	3	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_2	40.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGGTCATTTTATTTTA	75	False	NA	NA	False	AATAAA	-28	NA	74851529	74832632	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_74832944_74836279_74836384_74851366
H1_mix_00079574	chr7	-	2419	11	FSM	ENSG00000274523.5	ENST00000614461.4	2419	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	108.623017818508	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGCCCGCGTGTATGG	NA	False	NA	NA	False	ATTAAA	-16	NA	75073881	75027121	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_75028080_75052710_75052797_75055900_75056075_75057528_75057617_75058587_75058770_75061206_75061292_75063291_75063344_75064581_75064649_75066663_75066793_75070639_75070770_75073413
H1_mix_00079575	chr7	-	2309	11	FSM	ENSG00000274523.5	ENST00000610322.5	2309	11	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_1	16.1133485036475	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTGAAGAGATCTTCTTA	15	True	NA	-27	True	AATAAA	-28	NA	75073802	75042182	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_75043110_75052710_75052797_75055900_75056075_75057528_75057617_75058587_75058770_75061206_75061292_75063291_75063344_75064581_75064649_75066663_75066793_75070639_75070770_75073413
H1_mix_00079580	chr7	-	3712	2	FSM	ENSG00000272391.6	ENST00000614583.1	4073	2	362	-1	362	0	multi-exon	FALSE	canonical	3	118	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTACGTTCTGCATTTTAT	NA	False	NA	NA	False	AATAAA	-19	NA	75420923	75416785	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_75418894_75419319
H1_mix_00079581	chr7	-	6042	16	NNC	ENSG00000272391.6	novel	5867	15	NA	NA	-72	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_15	54.3672286911477	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTACGTTCTGCATTTTAT	NA	False	NA	NA	False	AATAAA	-19	NA	75486371	75416785	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_75418894_75419319_75419443_75421508_75423204_75424048_75424226_75424525_75424629_75425073_75425196_75425634_75425709_75426361_75426454_75437514_75437687_75439143_75439225_75440953_75441116_75441431_75441648_75474703_75474883_75475061_75475189_75484197_75484301_75485863
H1_mix_00079582	chr7	-	5867	15	FSM	ENSG00000272391.6	ENST00000615331.5	5867	15	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_14	52.2121359729435	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTACGTTCTGCATTTTAT	-2	True	NA	NA	False	AATAAA	-19	NA	75486299	75416785	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_75418894_75419319_75419443_75421508_75423204_75424048_75424226_75424525_75424629_75425073_75425196_75425634_75425709_75426361_75426454_75437514_75437687_75439143_75439225_75440953_75441116_75441431_75441648_75474703_75474883_75475061_75475189_75485863
H1_mix_00079585	chr7	-	8211	32	NNC	ENSG00000127946.17	novel	8009	31	NA	NA	-27422	35287	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	26.9790838936747	47	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACAACCTTACCTTGTC	-41	True	NA	NA	False	NA	NA	NA	75639265	75498010	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_75498143_75533301_75538225_75539322_75539432_75541918_75541981_75542850_75542975_75544694_75544801_75545087_75545189_75546938_75547033_75547754_75547814_75548890_75549002_75553452_75553590_75554112_75554221_75554439_75554527_75555415_75555552_75556025_75556170_75556709_75556812_75557653_75557771_75558166_75558256_75559731_75559916_75561328_75561402_75562072_75562171_75562934_75563076_75563187_75563264_75568198_75568257_75573760_75573902_75581236_75581299_75582074_75582152_75586752_75586834_75592055_75592113_75592371_75592515_75599183_75599248_75639050
H1_mix_00079588	chr7	-	8052	31	NNC	ENSG00000127946.17	novel	8009	31	NA	NA	-27391	0	at_least_one_novel_splicesite	FALSE	canonical	1	25	junction_29	20.0191297402149	131	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCGTGGTGGTGATTGA	-10	True	NA	34	True	AATAAA	-17	NA	75639234	75533297	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_75538225_75539322_75539432_75541918_75541981_75542850_75542975_75544694_75544801_75545087_75545189_75546938_75547033_75547754_75547814_75548890_75549002_75553452_75553590_75554112_75554221_75554439_75554527_75555415_75555552_75556025_75556170_75556709_75556812_75557653_75557771_75558166_75558256_75559731_75559916_75561328_75561402_75562072_75562171_75562934_75563076_75563187_75563264_75568198_75568257_75573760_75573902_75581236_75581299_75582074_75582152_75586752_75586834_75592055_75592113_75592371_75592515_75599183_75599248_75639050
H1_mix_00079592	chr7	-	610	4	NNC	ENSG00000006606.9	novel	703	4	NA	NA	1518	8	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	75.6879558890757	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATTTTTTGTCCATAAA	1404	False	NA	2	True	AATAAA	-27	NA	75788378	75769524	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_75769790_75771888_75772004_75772103_75772255_75788299
H1_mix_00079595	chr7	-	1352	11	FSM	ENSG00000189077.11	ENST00000440632.5	1352	11	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_9	15.8682072081253	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCCTGAAGGAAGACCTG	-35	True	NA	-63	True	NA	NA	NA	75994656	75987040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_75987286_75987359_75987429_75987537_75987603_75987717_75987811_75987922_75987985_75988082_75988342_75988420_75988517_75989164_75989225_75992143_75992261_75992438_75992558_75994489
H1_mix_00079597	chr7	-	1051	8	NIC	ENSG00000127952.17	novel	1415	9	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_4	67.0303007936694	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGCCTCCTGTACTGAT	37	True	NA	-5	True	NA	NA	NA	76047939	75996341	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_75996600_76000889_76001003_76003757_76003856_76005258_76005405_76021850_76021993_76028641_76028704_76030420_76030525_76047811
H1_mix_00079599	chr7	-	1426	9	FSM	ENSG00000127952.17	ENST00000248600.5	1415	9	3	-14	0	14	multi-exon	FALSE	canonical	3	11	junction_8	75.3913746724385	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTCCCAAGTGCCTGTT	-24	True	NA	13	True	NA	NA	NA	76048000	75996323	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_75996600_76000889_76001003_76003757_76003856_76005258_76005405_76013741_76013888_76021850_76021993_76028641_76028704_76030420_76030525_76047661
H1_mix_00079600	chr7	-	1429	9	FSM	ENSG00000127952.17	ENST00000359697.8	1411	9	0	-18	0	14	multi-exon	FALSE	canonical	3	10	junction_8	75.7013044801739	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTCCCAAGTGCCTGTT	-24	True	NA	13	True	NA	NA	NA	76048000	75996323	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_75996600_76000889_76001003_76003757_76003856_76005258_76005405_76013741_76013888_76021850_76021993_76028641_76028704_76030420_76030528_76047661
H1_mix_00079602	chr7	-	651	5	FSM	ENSG00000127952.17	ENST00000430497.5	651	5	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	97.2017875350037	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTTTGCTGCCTGAAAGT	1843	False	NA	-29	True	NA	NA	NA	76028672	75996365	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_75996600_76003757_76003856_76005258_76005405_76021850_76021993_76028641
H1_mix_00079603	chr7	-	1182	9	FSM	ENSG00000127952.17	ENST00000431581.5	1147	9	-35	0	0	0	multi-exon	TRUE	canonical	3	68	junction_8	58.1055074842308	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGGCCAGAGTGTGTATA	-12	True	NA	-72	True	NA	NA	NA	76047988	75996408	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_75996600_76000889_76001003_76003757_76003856_76005258_76005405_76013741_76013888_76021850_76021993_76028641_76028704_76030420_76030528_76047811
H1_mix_00079606	chr7	-	1740	1	FSM	ENSG00000280388.1	ENST00000624598.1	1987	1	1770	-1523	1770	1523	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCTGGGTGACAGAATGA	4806	False	NA	NA	False	NA	NA	NA	76044193	76042453	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_76042500_76044200
H1_mix_00079610	chr7	-	2809	11	FSM	ENSG00000146700.9	ENST00000275560.4	2800	11	0	-9	0	6	multi-exon	FALSE	canonical	3	27	junction_8	22.3886131772381	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTGTTTGAGCACAAATG	9	True	NA	-4	True	AATAAA	-30	NA	76409697	76389327	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_76390376_76391963_76392042_76393404_76393717_76393829_76393905_76395252_76395331_76397517_76397833_76398719_76398798_76400285_76400592_76401007_76401044_76404306_76404506_76409413
H1_mix_00079613	chr7	-	1529	7	FSM	ENSG00000146707.15	ENST00000310842.9	1528	7	0	-1	0	1	multi-exon	FALSE	canonical	3	25	junction_1	12.7202812687281	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTCGTGGTGTGGTGGTC	-1	False	NA	NA	False	AATAAA	-16	NA	76627279	76609984	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_76610216_76611453_76611592_76611721_76611814_76618182_76618301_76625521_76625684_76625999_76626216_76626707
H1_mix_00079614	chr7	-	1587	8	FSM	ENSG00000146707.15	ENST00000424818.5	1587	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	22.1036519283902	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCACCCTGTGTCTGCTTC	17	False	NA	NA	False	NA	NA	NA	76627261	76610027	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_76610216_76611453_76611592_76611721_76611814_76618182_76618301_76618496_76618616_76625521_76625684_76625999_76626216_76626707
H1_mix_00079617	chr7	-	331	3	FSM	ENSG00000186088.16	ENST00000489920.1	562	3	231	0	-120	0	multi-exon	FALSE	canonical	2	3	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATTTGGGTAAGAAAAGA	1401	False	NA	NA	False	NA	NA	NA	77330487	77328614	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_77328638_77329332_77329392_77330238
H1_mix_00079618	chr7	-	3361	3	FSM	ENSG00000214293.10	ENST00000654794.2	3180	3	24	-205	0	205	multi-exon	FALSE	canonical	3	125	junction_2	7	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATGTGCCTGAGATTAC	-2	True	NA	NA	False	NA	NA	NA	77696253	77681375	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_77684252_77685201_77685329_77695895
H1_mix_00079619	chr7	-	4131	2	FSM	ENSG00000214293.10	ENST00000398043.3	2394	2	-2	-1735	0	11	multi-exon	FALSE	canonical	3	125	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTATGGTACTTTAT	-16	True	NA	0	True	AATAAA	-15	NA	77696267	77681569	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_77685329_77695895
H1_mix_00079620	chr7	-	2856	3	FSM	ENSG00000214293.10	ENST00000663654.2	2875	3	19	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	59	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCGGAGCTGTGAGAAAT	-4	True	NA	-37	True	NA	NA	NA	77696255	77681606	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_77684252_77685201_77685329_77696171
H1_mix_00079621	chr7	-	897	2	FSM	ENSG00000135211.6	ENST00000257663.4	877	2	0	-20	0	20	multi-exon	FALSE	canonical	3	318	junction_1	0	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATCTGTTGTATGTGGTC	-30	True	NA	9	True	AATAAA	-38	NA	77798434	77793707	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_77794424_77798253
H1_mix_00079624	chr7	-	6208	20	FSM	ENSG00000187391.22	ENST00000628980.2	6212	20	4	0	4	0	multi-exon	TRUE	canonical	0	0	junction_9	15.6553956431124	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGGCTGTGTGTTAATTT	NA	False	NA	-1	True	AATAAA	-35	NA	78627239	78017056	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_78019977_78078946_78079086_78125693_78125838_78127196_78127417_78132888_78133061_78135020_78135207_78160024_78160274_78167915_78168109_78178010_78178103_78185628_78185671_78194873_78195064_78201161_78201194_78255942_78256582_78343777_78343961_78345921_78346044_78369155_78369214_78489760_78489841_78501576_78501788_78521429_78521646_78627119
H1_mix_00079625	chr7	-	6711	21	FSM	ENSG00000187391.22	ENST00000629359.2	6704	21	17	-24	16	0	multi-exon	FALSE	canonical	2	2	junction_1	18.3828044650429	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGGCTGTGTGTTAATTT	4	True	NA	-1	True	AATAAA	-35	NA	78771306	78017056	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_78019977_78065573_78065663_78078946_78079086_78125693_78125838_78127196_78127417_78132888_78133061_78135020_78135207_78160024_78160274_78167915_78168109_78178010_78178103_78194873_78195064_78201161_78201194_78255942_78256582_78343777_78343961_78345921_78346044_78369155_78369214_78489760_78489841_78501576_78501788_78521429_78521646_78627119_78627240_78770850
H1_mix_00079627	chr7	-	2013	9	FSM	ENSG00000187391.22	ENST00000628781.1	2013	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	11.9889271830302	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTGTTTTTGAATTCA	-13	True	NA	-21	True	AATAAA	-37	NA	78771080	78255788	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_78256582_78343777_78343961_78345921_78346044_78369155_78369214_78489760_78489841_78501576_78501788_78521429_78521646_78627119_78627240_78770850
H1_mix_00079628	chr7	-	7600	38	NIC	ENSG00000153956.16	novel	7542	39	NA	NA	-94	0	combination_of_known_splicesites	TRUE	canonical	3	36	junction_19	11.8854405104969	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACGCGGTTTGGGTTTTCT	315	False	NA	-4	True	AATAAA	-20	NA	82443871	81946443	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_81950509_81959274_81959358_81959719_81959830_81961893_81962024_81962439_81962496_81964055_81964109_81964206_81964360_81965593_81965666_81967168_81967208_81967595_81967664_81968886_81968974_81969880_81969985_81970674_81970738_81971776_81971865_81974454_81974553_81982566_81982628_81984634_81984712_81991184_81991247_81994867_81994940_81997178_81997236_82005422_82005498_82005764_82005840_82007678_82007757_82012153_82012244_82013460_82013511_82014400_82014480_82032796_82032902_82038076_82038236_82060427_82060528_82064303_82064355_82066454_82066525_82084768_82084901_82117043_82117174_82136634_82136677_82170549_82170610_82335134_82335252_82349567_82349650_82443364
H1_mix_00079631	chr7	-	3085	3	ISM	ENSG00000186472.20	ENST00000423517.6	17147	20	-4	314330	-4	-168386	5prime_fragment	FALSE	canonical	2	14	junction_2	2.5	243	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCCAAATCACAGCCTACA	NA	False	NA	NA	False	NA	NA	NA	83162934	83134806	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_83135657_83154747_83156393_83162344
H1_mix_00079635	chr7	-	389	2	Intergenic	novelGene_1376	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	1875	junction_1	0	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGGCTTGGGCTCAGA	NA	False	NA	NA	False	NA	NA	NA	83465350	83459696	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_-_83459784_83465048
H1_mix_00079638	chr7	-	8100	17	FSM	ENSG00000075213.11	ENST00000265362.9	8113	17	0	13	0	-13	multi-exon	FALSE	canonical	3	192	junction_10	16.3553078158132	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAAATATCCATGTCATT	0	True	NA	-12	True	AGTAAA	-7	NA	84194789	83955789	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_83961827_83963204_83963348_83977131_83977197_83981320_83981479_83985435_83985478_84001954_84002047_84005338_84005559_84007352_84007498_84011021_84011092_84011182_84011298_84014208_84014352_84046323_84046444_84060464_84060559_84110469_84110590_84129122_84129186_84134793_84134952_84194474
H1_mix_00079639	chr7	-	553	5	FSM	ENSG00000075213.11	ENST00000420047.1	553	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	90.6890291049585	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGGTAACGCTGGCTTT	-5	True	NA	NA	False	GGGGCT	-40	NA	84195161	84110475	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_84110590_84129122_84129186_84134793_84134952_84194474_84194669_84195137
H1_mix_00079642	chr7	-	8822	21	NNC	ENSG00000164659.15	novel	6796	22	NA	NA	19278	1995	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_20	35.7279652373319	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTTGACATACTGATTT	NA	False	NA	NA	False	AATAAA	-17	NA	87040237	86874910	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_86880531_86891723_86891890_86892921_86893101_86897505_86897633_86907669_86907772_86908446_86908544_86909811_86910002_86912071_86912246_86912940_86913205_86914722_86914861_86918441_86918545_86919219_86919311_86925527_86925657_86926735_86926917_86938125_86938215_86938807_86938961_86940009_86940116_86942017_86942105_86944898_86945047_86947726_86947923_87039755
H1_mix_00079643	chr7	-	6796	22	FSM	ENSG00000164659.15	ENST00000450689.7	6796	22	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_21	43.7099800763698	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTTTCAGTTAAATTT	1	True	NA	-14	True	AATAAA	-23	NA	87059654	86876905	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_86880531_86891723_86891890_86892921_86893101_86897505_86897633_86907669_86907772_86908446_86908544_86909811_86910002_86912071_86912246_86912940_86913205_86914722_86914861_86918441_86918545_86919219_86919311_86925527_86925657_86926735_86926917_86938125_86938215_86938807_86938961_86940009_86940116_86942017_86942105_86944898_86945047_86947726_86947923_86964903_86965025_87059324
H1_mix_00079644	chr7	-	6922	22	NNC	ENSG00000164659.15	novel	6796	22	NA	NA	19302	-2	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_21	39.6243128369497	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGAGTTTCAGTTAAAT	1	False	NA	-16	True	AATAAA	-21	NA	87040213	86876907	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_86880531_86891723_86891890_86892921_86893101_86897505_86897633_86907669_86907772_86908446_86908544_86909811_86910002_86912071_86912246_86912940_86913205_86914722_86914861_86918441_86918545_86919219_86919311_86925527_86925657_86926735_86926917_86938125_86938215_86938807_86938961_86940009_86940116_86942017_86942105_86944898_86945047_86947726_86947923_86964903_86965025_87039755
H1_mix_00079646	chr7	-	709	2	FSM	ENSG00000164659.15	ENST00000480216.1	709	2	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATACTGTTCCTTTTTTA	5623	False	NA	-2	True	AATAAA	-15	NA	86892935	86891194	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_86891890_86892921
H1_mix_00079647	chr7	-	3551	22	NNC	ENSG00000164659.15	novel	6796	22	NA	NA	19261	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_17	69.1896077027393	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATACTGTTCCTTTTTTA	NA	False	NA	-2	True	AATAAA	-15	NA	87040254	86891194	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_86891890_86892921_86893101_86897505_86897633_86907669_86907772_86908446_86908544_86909811_86910002_86912071_86912246_86912940_86913205_86914722_86914861_86918441_86918545_86919219_86919311_86925527_86925657_86926735_86926917_86938125_86938215_86938807_86938961_86940009_86940116_86941351_86941386_86942017_86942105_86944898_86945047_86947726_86947923_87039755_87039872_87040102
H1_mix_00079649	chr7	-	829	2	FSM	ENSG00000224046.3	ENST00000670440.2	836	2	14	-7	14	7	multi-exon	FALSE	canonical	3	22	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATAACTTTATTACTAATT	1	True	NA	6	True	AATAAA	-26	NA	87152331	87151411	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_87151659_87151749
H1_mix_00079650	chr7	-	1498	4	FSM	ENSG00000135185.12	ENST00000257637.8	1062	4	-855	419	0	21	multi-exon	FALSE	canonical	3	447	junction_3	39.2031744746377	4303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATTTTTGGATAAGGTAT	-7	True	NA	NA	False	NA	NA	NA	87220587	87196578	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_87196759_87197940_87198046_87199006_87199058_87219425
H1_mix_00079651	chr7	-	1275	5	FSM	ENSG00000135185.12	ENST00000433078.5	1273	5	0	-2	0	0	multi-exon	FALSE	canonical	3	320	junction_4	83.2987845049374	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTTTCTTGACTTTT	-7	True	NA	-3	True	AATAAA	-20	NA	87220587	87196159	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_87196759_87197940_87198046_87199006_87199058_87219425_87219719_87220360
H1_mix_00079652	chr7	-	601	3	FSM	ENSG00000135185.12	ENST00000423734.1	601	3	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_2	48	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATTAGTGGA	950	False	NA	NA	False	NA	NA	NA	87219630	87197700	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_87198046_87199006_87199058_87219425
H1_mix_00079654	chr7	-	2749	3	FSM	ENSG00000182165.19	ENST00000661943.2	3168	3	18	401	6	-401	multi-exon	FALSE	canonical	3	75	junction_2	15.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAGTGGGTCATTGGTTG	-26	True	NA	NA	False	AAGAAA	-17	NA	87345528	87323343	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_87325445_87341522_87341685_87345042
H1_mix_00079655	chr7	-	1422	4	FSM	ENSG00000182165.19	ENST00000416560.7	1447	4	25	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	37.3303570242176	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTCTCTGGTTC	-13	True	NA	NA	False	AATAAA	-15	NA	87345515	87324586	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_87325445_87341522_87341685_87345042_87345234_87345304
H1_mix_00079656	chr7	-	1244	3	FSM	ENSG00000182165.19	ENST00000421293.3	1265	3	24	-3	6	0	multi-exon	FALSE	canonical	3	52	junction_2	27	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTCTCTGGTTC	-26	True	NA	NA	False	AATAAA	-15	NA	87345528	87324586	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_87325445_87341522_87341685_87345304
H1_mix_00079657	chr7	-	526	3	FSM	ENSG00000182165.19	ENST00000432193.7	561	3	32	3	2	2	multi-exon	FALSE	canonical	1	5	junction_2	50.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTTCTGAGTCCTAATT	0	True	NA	-4	True	AATAAA	-18	NA	87345502	87325349	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_87325445_87341522_87341685_87345233
H1_mix_00079660	chr7	-	4063	12	FSM	ENSG00000075303.13	ENST00000341119.10	4056	12	0	-7	0	7	multi-exon	TRUE	canonical	3	50	junction_3	7.74916684404585	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCAACATTTATTGGGA	12	True	NA	2	True	AATAAA	-25	NA	87876360	87833560	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_87836362_87836729_87836811_87841632_87841715_87843753_87843864_87846948_87847123_87847852_87847978_87849880_87849949_87854203_87854311_87856291_87856352_87858630_87858752_87860571_87860641_87876095
H1_mix_00079661	chr7	-	441	3	FSM	ENSG00000075303.13	ENST00000496348.5	441	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	2	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTCTAAATCATAATTTTA	NA	False	NA	-9	True	AATAAA	-14	NA	87841741	87836110	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_87836362_87836729_87836811_87841632
H1_mix_00079664	chr7	-	414	3	FSM	ENSG00000223969.7	ENST00000412669.2	497	3	83	0	83	0	multi-exon	FALSE	canonical	2	3	junction_2	3	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGGAATCATTGCTACA	3	True	NA	1	True	AATAAA	-17	NA	90597315	90590619	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_90590729_90591715_90591902_90597196
H1_mix_00079666	chr7	-	3899	3	FSM	ENSG00000127989.14	ENST00000351870.8	3941	3	0	42	0	-42	multi-exon	FALSE	canonical	3	120	junction_2	15.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCAAGATATCATTGCTAG	0	True	NA	NA	False	NA	NA	NA	91880702	91870970	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_91874765_91880054_91880114_91880656
H1_mix_00079668	chr7	-	3155	10	FSM	ENSG00000001630.18	ENST00000003100.13	3155	10	0	0	0	0	multi-exon	FALSE	canonical	3	669	junction_9	71.8207645616658	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTCTGTATTCATGAAT	-22	True	NA	-23	True	ATTAAA	-17	NA	92134477	92112152	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_92113844_92117043_92117213_92118519_92118616_92123119_92123316_92123733_92123854_92126252_92126428_92127504_92127632_92128879_92129057_92131773_92131873_92134172
H1_mix_00079669	chr7	-	2988	10	FSM	ENSG00000001630.18	ENST00000450723.5	1729	10	0	-1259	0	0	multi-exon	FALSE	canonical	3	154	junction_9	213.768537568841	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTCTGTATTCATGAAT	-1	True	NA	-23	True	ATTAAA	-17	NA	92134803	92112152	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_92113844_92117043_92117213_92118519_92118616_92123119_92123316_92123733_92123854_92126252_92126428_92127504_92127632_92128879_92129057_92131773_92131873_92134665
H1_mix_00079670	chr7	-	4024	17	FSM	ENSG00000001631.17	ENST00000692807.1	4157	17	9	124	0	0	multi-exon	FALSE	canonical	0	0	junction_16	27.6741643956959	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCAGAGATATAGTCATAT	-8	True	NA	NA	False	AATAAA	-19	NA	92245914	92199412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_92200805_92201306_92201424_92213194_92213402_92213891_92213980_92214610_92214778_92221901_92222054_92222821_92222979_92225719_92225828_92226525_92226683_92234448_92234593_92234807_92234924_92235402_92235647_92236412_92236543_92237666_92237760_92240992_92241153_92242033_92242138_92245426
H1_mix_00079671	chr7	-	4079	19	FSM	ENSG00000001631.17	ENST00000394505.7	4079	19	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_18	25.3667542705452	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCAGAGATATAGTCATAT	-8	True	NA	NA	False	AATAAA	-19	NA	92245914	92199412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_92200805_92201306_92201424_92213194_92213402_92213891_92213980_92214610_92214778_92221901_92222054_92222821_92222979_92225719_92225828_92226525_92226683_92234448_92234593_92234807_92234924_92235402_92235647_92236412_92236543_92237666_92237760_92240992_92241153_92242033_92242138_92244001_92244150_92244901_92245172_92245789
H1_mix_00079673	chr7	-	695	2	FSM	ENSG00000001631.17	ENST00000487168.2	2696	2	2052	-51	2052	0	multi-exon	FALSE	canonical	3	106	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATTACT	NA	False	NA	NA	False	NA	NA	NA	92201569	92200372	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_92200805_92201306
H1_mix_00079674	chr7	-	5179	12	FSM	ENSG00000127980.16	ENST00000496420.5	5333	12	162	-8	162	2	multi-exon	FALSE	canonical	3	9	junction_2	50.7378613908036	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTTCTTTGTATATCAA	9890	False	NA	0	True	AATAAA	-27	NA	92507661	92487017	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_92487542_92489292_92489424_92489718_92489912_92491271_92491503_92492952_92494397_92494486_92494630_92496712_92496778_92499703_92499839_92501506_92502080_92503040_92503196_92504731_92504903_92506247
H1_mix_00079679	chr7	-	2434	12	FSM	ENSG00000234545.8	ENST00000438306.5	2434	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	243.847737344976	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGTGTTCTTATCAGCT	-2	True	NA	-16	True	AATAAA	-20	NA	92590393	92560792	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_92562369_92566013_92566062_92569822_92569916_92575770_92575822_92577102_92577196_92577654_92577718_92578149_92578183_92578318_92578394_92579316_92579396_92581505_92581604_92585297_92585397_92590267
H1_mix_00079680	chr7	-	2293	9	FSM	ENSG00000234545.8	ENST00000481407.5	2293	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	204.343116779108	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAACGGCTTCA	1	True	NA	NA	False	AAAAAG	-14	NA	92590390	92561215	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_92562369_92569822_92569916_92575770_92575822_92577102_92577196_92577654_92578183_92578318_92578394_92579316_92579396_92581505_92581604_92590267
H1_mix_00079683	chr7	-	11611	8	FSM	ENSG00000105810.10	ENST00000265734.8	11612	8	0	1	0	-1	multi-exon	FALSE	canonical	3	15	junction_7	14.2771402841703	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTTTTTTTTCTTTCTT	3165	False	NA	-2	True	ATTAAA	-18	NA	92833917	92604921	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_92615287_92618071_92618208_92623035_92623087_92671425_92671536_92725625_92725794_92774695_92774832_92833090_92833691_92833872
H1_mix_00079684	chr7	-	11727	8	FSM	ENSG00000105810.10	ENST00000424848.3	11663	8	-65	1	-65	-1	multi-exon	FALSE	canonical	3	21	junction_7	12.5128505374047	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTTTTTTTTCTTTCTT	444	False	NA	-2	True	ATTAAA	-18	NA	92836638	92604921	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_92615287_92618071_92618208_92623035_92623087_92671425_92671536_92725625_92725794_92774695_92774832_92833090_92833691_92836477
H1_mix_00079686	chr7	-	3624	14	NNC	ENSG00000004948.16	novel	3572	14	NA	NA	-67651	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_13	8.05381309228392	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTATATTTGCATATTTT	NA	False	NA	-2	True	TATAAA	-29	NA	93642381	93424538	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_93426590_93434252_93434295_93435951_93436171_93438059_93438127_93438209_93438271_93443603_93443758_93460820_93460948_93468714_93468807_93472374_93472488_93477557_93477669_93479353_93479508_93486930_93487008_93574288_93574507_93642243
H1_mix_00079687	chr7	-	339	1	FSM	ENSG00000237729.2	ENST00000425207.1	252	1	-22	-65	-22	65	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTAAAAGATTTGGGCCT	11	False	NA	NA	False	AATAAA	-24	NA	93670099	93669760	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_93669800_93670100
H1_mix_00079689	chr7	-	1481	4	FSM	ENSG00000105829.13	ENST00000222547.8	1481	4	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_2	43.2897216438267	196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTCTTTAAGTCTCTTT	2	True	NA	-7	True	AATAAA	-19	NA	94004355	93993244	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_93994386_93996264_93996322_93999169_93999295_94004197
H1_mix_00079690	chr7	-	1915	11	FSM	ENSG00000127990.19	ENST00000648936.2	1868	11	-19	-28	0	28	multi-exon	FALSE	canonical	3	169	junction_4	28.6986062379343	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTCATGCAGGGCAGCCC	9488	False	NA	NA	False	AATAAA	-34	NA	94656152	94584951	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94629718_94629842_94655989
H1_mix_00079691	chr7	-	1546	10	FSM	ENSG00000127990.19	ENST00000437425.7	1532	10	0	-14	0	0	multi-exon	FALSE	canonical	3	42	junction_9	61.9876530915832	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGGTGAAATTTACTTCA	-1	True	NA	-14	True	AATAAA	-40	NA	94656177	94585222	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94655989
H1_mix_00079692	chr7	-	1672	10	FSM	ENSG00000127990.19	ENST00000447873.6	1672	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	70.6956614171611	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGGTGAAATTTACTTCA	-3	True	NA	-14	True	AATAAA	-40	NA	94656207	94585222	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94629718_94629842_94655989
H1_mix_00079694	chr7	-	1662	11	FSM	ENSG00000127990.19	ENST00000646137.1	1656	11	0	-6	0	0	multi-exon	FALSE	canonical	0	0	junction_1	100.513133470209	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTTGATCTTTAAAATAA	10	True	NA	-55	True	AAAACA	-27	NA	94656166	94585263	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_94585516_94587777_94587850_94588688_94588733_94598774_94598964_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94629718_94629842_94655989
H1_mix_00079696	chr7	-	1871	9	FSM	ENSG00000105854.13	ENST00000633192.1	1876	9	22	-17	22	0	multi-exon	FALSE	canonical	3	308	junction_6	73.0529559634653	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACTAACTAAAATCCCAGT	77	False	NA	NA	False	ATTAAA	-19	NA	95435307	95404879	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_95405489_95406118_95406248_95406986_95407069_95409900_95410102_95411652_95411780_95412311_95412478_95416241_95416298_95424514_95424586_95434877
H1_mix_00079697	chr7	-	1726	9	FSM	ENSG00000105854.13	ENST00000433091.6	1726	9	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_5	125.903174602549	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACTAACTAAAATCCCAGT	186	False	NA	NA	False	ATTAAA	-19	NA	95435198	95404879	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_95405489_95406118_95406248_95406986_95407069_95409900_95410102_95411652_95411744_95412311_95412478_95416241_95416298_95424514_95424586_95434877
H1_mix_00079700	chr7	-	3139	18	FSM	ENSG00000004864.14	ENST00000265631.10	3141	18	0	2	0	-1	multi-exon	TRUE	canonical	3	391	junction_13	52.3575014537316	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGAGTTGTTTGGTCTTG	4677	False	96322130	-5	True	AATAAA	-14	NA	96322098	96120221	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_96121378_96121654_96121746_96121838_96121998_96131742_96131882_96146555_96146697_96170044_96170126_96171471_96171525_96184276_96184436_96184926_96185012_96189293_96189379_96189580_96189675_96191108_96191248_96193036_96193184_96208837_96208978_96234801_96234918_96277195_96277339_96296897_96296952_96321941
H1_mix_00079704	chr7	-	1314	3	FSM	ENSG00000127922.10	ENST00000248566.4	458	3	-45	-811	-11	811	multi-exon	FALSE	canonical	3	7433	junction_1	388.5	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGAGCATAAATATGTTT	NA	False	NA	NA	False	AATACA	-19	NA	96709891	96687950	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_96688967_96694797_96694892_96709687
H1_mix_00079705	chr7	-	2017	14	NNC	ENSG00000070669.17	novel	2356	14	NA	NA	0	7223	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	171.777308708054	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATGATTCATTATTGCA	-26	True	NA	NA	False	NA	NA	NA	97872477	97844453	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_97844472_97852131_97852469_97853059_97853216_97853304_97853387_97854579_97854681_97855352_97855460_97856689_97856817_97858277_97858406_97858853_97858956_97859212_97859399_97864258_97864497_97868907_97869180_97869777_97869814_97872350
H1_mix_00079706	chr7	-	2214	13	FSM	ENSG00000070669.17	ENST00000394308.8	2385	13	0	171	0	-171	multi-exon	FALSE	canonical	3	498	junction_10	67.7390315024424	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTTGAATCTTCTATAGG	0	True	NA	NA	False	NA	NA	NA	97872408	97851847	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_97852469_97853059_97853216_97853304_97853387_97854579_97854681_97855352_97855460_97856689_97856817_97858277_97858406_97858853_97858956_97859212_97859399_97864258_97864497_97868907_97869180_97869777_97869814_97872350
H1_mix_00079707	chr7	-	1960	12	FSM	ENSG00000070669.17	ENST00000454046.5	1947	12	0	-13	0	0	multi-exon	FALSE	canonical	3	12	junction_4	182.714563103897	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCATTTATGTTCATGCAG	2638	False	NA	-4	True	AATAAA	-26	NA	97869813	97852117	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_97852469_97853059_97853216_97853304_97853387_97854579_97854755_97855352_97855460_97856689_97856817_97858277_97858406_97858853_97858956_97859212_97859399_97864258_97864497_97868907_97869180_97869777
H1_mix_00079708	chr7	-	2299	13	FSM	ENSG00000070669.17	ENST00000394309.7	2289	13	0	-10	0	0	multi-exon	FALSE	canonical	3	16	junction_12	174.017400151696	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCATTTATGTTCATGCAG	-2	True	NA	-4	True	AATAAA	-26	NA	97872131	97852117	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_97852469_97853059_97853216_97853304_97853387_97854579_97854681_97855352_97855460_97856689_97856817_97858277_97858406_97858853_97858956_97859212_97859399_97864258_97864497_97868907_97869180_97869777_97869814_97871718
H1_mix_00079710	chr7	-	1588	11	FSM	ENSG00000070669.17	ENST00000455086.5	1588	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_10	189.695967273951	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAAAGTCCTAAATC	57	False	NA	-38	True	NA	NA	NA	97872394	97852151	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_97852469_97853059_97853216_97853304_97853387_97854579_97854681_97855352_97855460_97856689_97856817_97858277_97858406_97858853_97858956_97859212_97859399_97864258_97864497_97872350
H1_mix_00079712	chr7	-	1812	13	FSM	ENSG00000070669.17	ENST00000444334.5	1812	13	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_11	160.579592587463	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGGTAGATAGGGGAACAA	15	True	NA	-90	True	NA	NA	NA	97872436	97852203	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_97852469_97853059_97853216_97853304_97853387_97854579_97854681_97855352_97855460_97856689_97856817_97858277_97858406_97858853_97858956_97859212_97859399_97864258_97864497_97868907_97869106_97869777_97869814_97872350
H1_mix_00079713	chr7	-	689	4	FSM	ENSG00000070669.17	ENST00000487714.1	689	4	0	0	0	0	multi-exon	FALSE	canonical	3	641	junction_2	21.9241115365405	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGACCCTTCTGCCCGCA	2740	False	NA	NA	False	NA	NA	NA	97854875	97852313	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_97852469_97853059_97853216_97853304_97853387_97854579
H1_mix_00079716	chr7	-	536	2	NNC	ENSG00000284707.2	novel	3743	18	NA	NA	144	13621	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	0	18	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGGAGTTGTTGAATT	164	False	NA	NA	False	AAAAAG	-10	NA	97928267	97922733	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_97923084_97928081
H1_mix_00079717	chr7	-	902	5	Fusion	ENSG00000243554.1_ENSG00000284627.1_ENSG00000284707.2	novel	1088	2	NA	NA	-2	5348	multi-exon	FALSE	canonical	3	20	junction_2	19.2158788505756	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGGAGTTGTTGAATT	-3	True	NA	NA	False	AAAAAG	-10	NA	97972301	97922733	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_-_97923084_97928081_97928318_97928709_97928778_97937079_97937161_97972134
H1_mix_00079721	chr7	-	991	4	Fusion	ENSG00000183444.10_ENSG00000243554.1	novel	447	6	NA	NA	-55	-196	multi-exon	FALSE	canonical	3	82	junction_1	34.4770455037358	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGTTGTTTGCTGAGTT	21	True	NA	NA	False	TATAAA	-26	NA	97972309	97966285	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_-_97966978_97969004_97969053_97969769_97969846_97972134
H1_mix_00079722	chr7	-	830	3	NIC	ENSG00000285725.1	novel	1910	3	NA	NA	-1921	-38	combination_of_known_splicesites	FALSE	canonical	3	44	junction_1	60.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGCCATATTTGGTTTT	5	True	NA	-8	True	NA	NA	NA	97972325	97966414	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_97966978_97969769_97969846_97972134
H1_mix_00079724	chr7	-	3645	14	FSM	ENSG00000006453.14	ENST00000005260.9	3645	14	0	0	0	0	multi-exon	TRUE	canonical	3	209	junction_10	18.1551498879966	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTGAGCTGTAAGCGC	-2	True	NA	-8	True	AATAAA	-17	NA	98401090	98291649	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_98293597_98294073_98294112_98304195_98304377_98306438_98306517_98307688_98307897_98310444_98310593_98312096_98312265_98315459_98315613_98317218_98317357_98320057_98320130_98320236_98320299_98355041_98355129_98362356_98362433_98400801
H1_mix_00079725	chr7	-	879	1	FSM	ENSG00000214389.2	ENST00000398259.2	784	1	-24	-71	-24	71	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATGTTGATTCCTGGCT	1	True	NA	NA	False	AATAAA	-36	NA	98386608	98385729	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_98385700_98386600
H1_mix_00079727	chr7	-	5726	18	FSM	ENSG00000198742.10	ENST00000361368.7	5668	18	-58	0	-58	0	multi-exon	TRUE	canonical	3	123	junction_2	24.3926927625388	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTTGGCGTCTGTTATT	-1	True	NA	-17	True	AATAAA	-13	NA	99144166	99027439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_99030684_99033036_99033122_99035514_99035717_99037066_99037188_99038387_99038526_99040377_99040557_99042117_99042233_99045697_99045802_99047683_99047883_99049562_99049710_99051356_99051442_99052204_99052447_99054789_99054866_99057204_99057271_99057417_99057552_99060598_99060708_99061798_99061838_99143725
H1_mix_00079728	chr7	-	5722	18	NNC	ENSG00000198742.10	novel	5668	18	NA	NA	-58	5	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_2	32.1871688849835	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCGTCTGTTATTTTGGT	-1	True	NA	-12	True	AATAAA	-18	NA	99144166	99027434	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_99030684_99033036_99033113_99035514_99035717_99037066_99037188_99038387_99038526_99040377_99040557_99042117_99042233_99045697_99045802_99047683_99047883_99049562_99049710_99051356_99051442_99052204_99052447_99054789_99054866_99057204_99057271_99057417_99057552_99060598_99060708_99061798_99061838_99143725
H1_mix_00079729	chr7	-	1321	7	NNC	ENSG00000106244.13	novel	2604	6	NA	NA	0	47127	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	294.888491166105	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATTGTTATCTGTAGGA	-11	True	NA	NA	False	NA	NA	NA	99408597	99344920	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_99344950_99395984_99396741_99397861_99398014_99400302_99400425_99403397_99403506_99404861_99404954_99408535
H1_mix_00079730	chr7	-	1319	7	NNC	ENSG00000106244.13	novel	2604	6	NA	NA	0	7093	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	294.888491166105	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCAGGTGTGGTGGCAC	-11	True	NA	NA	False	NA	NA	NA	99408597	99384954	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_99384985_99395987_99396741_99397861_99398014_99400302_99400425_99403397_99403506_99404861_99404954_99408535
H1_mix_00079731	chr7	-	2604	6	FSM	ENSG00000106244.13	ENST00000350498.8	2604	6	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_5	94.3046128246121	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCACGTATTCCTTGAATAG	-11	True	NA	NA	False	AATAAA	-20	NA	99408597	99394672	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_99396741_99397861_99398014_99400302_99400425_99403397_99403506_99404861_99404954_99408535
H1_mix_00079732	chr7	-	5464	8	FSM	ENSG00000106246.18	ENST00000292478.9	5464	8	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_4	13.5526185435788	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-36	True	NA	NA	False	NA	NA	NA	99438798	99416738	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_99420150_99423774_99423958_99424794_99425617_99429102_99429205_99429587_99429807_99433277_99433419_99434789_99435269_99438691
H1_mix_00079733	chr7	-	2344	8	NIC	ENSG00000106246.18	novel	5464	8	NA	NA	30	-3188	combination_of_known_junctions	FALSE	canonical	2	3	junction_7	60.7252091013951	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGGAGCCCCAGGACAA	37	True	NA	NA	False	NA	NA	NA	99438725	99419926	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_99420150_99423774_99423958_99424794_99425617_99429102_99429205_99429587_99429807_99433277_99433419_99434789_99435269_99438550
H1_mix_00079734	chr7	-	2443	8	NIC	ENSG00000106246.18	novel	5464	8	NA	NA	0	-3375	intron_retention	FALSE	canonical	3	14	junction_5	57.121424552064	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTCCGAGCCTATTACAA	-36	True	NA	NA	False	NA	NA	NA	99438798	99420113	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_99420150_99423774_99423958_99424794_99425617_99429102_99429205_99429587_99429807_99432923_99433419_99434789_99435269_99438691
H1_mix_00079735	chr7	-	556	2	FSM	ENSG00000106246.18	ENST00000430029.1	556	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTGATCAAGGAAGGGAAG	629	False	NA	NA	False	NA	NA	NA	99438647	99434809	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_99435269_99438550
H1_mix_00079736	chr7	-	824	1	FSM	ENSG00000228335.1	ENST00000434352.1	607	1	-7	-210	-7	210	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	99443503	99442679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_99442700_99443500
H1_mix_00079737	chr7	-	880	3	FSM	ENSG00000241468.8	ENST00000491560.1	658	3	-222	0	-188	0	multi-exon	FALSE	canonical	3	5999	junction_1	278.5	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGCTGATTGCCTGCCT	5480	False	NA	-36	True	AATAAA	-13	NA	99460687	99458194	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_99458356_99459146_99459264_99460085
H1_mix_00079738	chr7	-	323	3	FSM	ENSG00000241468.8	ENST00000359832.8	323	3	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_1	817	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGCTGATTGCCTGCCT	3	True	NA	-36	True	AATAAA	-13	NA	99466164	99458194	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_99458356_99460085_99460194_99466110
H1_mix_00079739	chr7	-	443	4	FSM	ENSG00000241468.8	ENST00000292475.8	443	4	0	0	0	0	multi-exon	FALSE	canonical	3	2079	junction_3	1992.21200344408	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGCTGATTGCCTGCCT	0	True	NA	-36	True	AATAAA	-13	NA	99466167	99458194	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_99458356_99459146_99459264_99460085_99460194_99466110
H1_mix_00079740	chr7	-	306	3	FSM	ENSG00000241468.8	ENST00000488775.5	306	3	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_1	1859	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTGTGCTGATTGCCTGC	0	True	NA	-38	True	AATAAA	-11	NA	99466167	99458196	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_99458356_99460085_99460194_99466128
H1_mix_00079743	chr7	-	2250	3	FSM	ENSG00000160908.15	ENST00000337673.7	2163	3	17	-104	0	104	multi-exon	FALSE	canonical	3	74	junction_1	4	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTCAATCTGTCCTGAGC	12	True	NA	96	True	NA	NA	NA	99500264	99493135	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_99494632_99498715_99498843_99499637
H1_mix_00079745	chr7	-	1619	2	FSM	ENSG00000160908.15	ENST00000481881.1	1619	2	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	0	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGGAGTTTTACTCTTG	1	True	NA	NA	False	NA	NA	NA	99500275	99497861	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_99498843_99499637
H1_mix_00079746	chr7	-	2468	2	FSM	ENSG00000221909.3	ENST00000449309.2	2468	2	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	0	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTTTTCTACATAGTA	-2	True	NA	-16	True	AATAAA	-20	NA	99552114	99546299	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_99548507_99551853
H1_mix_00079747	chr7	-	3326	6	FSM	ENSG00000146833.16	ENST00000349062.7	3314	6	0	-12	0	12	multi-exon	FALSE	canonical	3	31	junction_5	11.6206712370672	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGGGTATTGGGCATA	-7	True	NA	6	True	AATATA	-31	NA	99919530	99890390	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_99892747_99903217_99903316_99903575_99903599_99908581_99908813_99909564_99909661_99919008
H1_mix_00079748	chr7	-	1942	6	FSM	ENSG00000146833.16	ENST00000354241.5	1942	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	16.9233566410449	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATGAAACATACACA	-3	True	NA	NA	False	AAGAAA	-38	NA	99919493	99901165	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_99902175_99903217_99903316_99903575_99903599_99908581_99908813_99909564_99909661_99919008
H1_mix_00079749	chr7	-	1119	2	FSM	ENSG00000176402.6	ENST00000312891.3	1119	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTGGTCATTGGAC	4631	False	NA	0	True	AATAAA	-20	NA	99929620	99923265	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_99923604_99928839
H1_mix_00079750	chr7	-	2817	7	NNC	ENSG00000166526.18	novel	2797	6	NA	NA	0	12759	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	73.9744700705738	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGATCCCTAGGCAGCCAAA	12	True	NA	NA	False	AAAAAG	-9	NA	100081711	100051273	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_100051311_100069977_100072213_100075134_100075262_100075541_100075631_100077302_100077434_100079535_100079657_100081634
H1_mix_00079751	chr7	-	2798	6	FSM	ENSG00000166526.18	ENST00000299667.9	2797	6	0	-1	0	0	multi-exon	FALSE	canonical	3	132	junction_4	28.7304716285689	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGAGTGTGGTTTTGTGCA	0	True	NA	-1	True	ATTAAA	-22	NA	100081723	100069971	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100072213_100075134_100075262_100075541_100075631_100077302_100077434_100079535_100079657_100081634
H1_mix_00079752	chr7	-	2854	5	FSM	ENSG00000166526.18	ENST00000424697.5	2718	5	0	-136	0	136	multi-exon	FALSE	canonical	3	29	junction_4	75.2927619363243	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAGACCAGCCTGACCAA	-1	True	NA	NA	False	NA	NA	NA	100081764	100069835	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100072213_100075134_100075262_100075541_100075631_100077302_100077434_100081634
H1_mix_00079753	chr7	-	2545	4	FSM	ENSG00000166526.18	ENST00000412947.6	2545	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	89.25743044077	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATAGTTTTTCAGAAGAG	-19	True	NA	-21	True	ATTAAA	-2	NA	100081742	100069991	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100072213_100075134_100075262_100075541_100075631_100081634
H1_mix_00079755	chr7	-	2976	14	FSM	ENSG00000166508.18	ENST00000354230.7	2975	14	0	-1	0	0	multi-exon	FALSE	canonical	3	50	junction_13	382.444071016432	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCCTGTTCGTTTTTATG	1142	False	NA	-4	True	ATTAAA	-23	NA	100100780	100092727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100093134_100093291_100093402_100094172_100094342_100095386_100095471_100095773_100096168_100097300_100097385_100097613_100097746_100097833_100097949_100098140_100098291_100098577_100098716_100099022_100099404_100099588_100099754_100100013_100100094_100100212
H1_mix_00079756	chr7	-	2467	15	FSM	ENSG00000166508.18	ENST00000303887.10	2467	15	0	0	0	0	multi-exon	FALSE	canonical	3	1140	junction_11	148.78555997523	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCCTGTTCGTTTTTATG	-23	True	NA	-4	True	ATTAAA	-23	NA	100101397	100092727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100093134_100093291_100093402_100094172_100094342_100095386_100095471_100095773_100096168_100097300_100097385_100097613_100097746_100097833_100097949_100098140_100098291_100098577_100098716_100099022_100099204_100099278_100099404_100099588_100099754_100100013_100100094_100101263
H1_mix_00079757	chr7	-	3085	14	FSM	ENSG00000166508.18	ENST00000621318.4	3084	14	0	-1	0	0	multi-exon	FALSE	canonical	3	1151	junction_11	140.297570485107	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCCTGTTCGTTTTTATG	9888	False	NA	-4	True	ATTAAA	-23	NA	100101940	100092727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100093134_100093291_100093402_100094172_100094342_100095386_100095471_100095773_100096168_100097300_100097385_100097613_100097746_100097833_100097949_100098140_100098291_100098577_100098716_100099022_100099404_100099588_100099754_100100013_100100094_100101263
H1_mix_00079759	chr7	-	776	3	FSM	ENSG00000166508.18	ENST00000467516.5	776	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	593	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCCCAGAACCAGTACCCT	1449	False	NA	NA	False	NA	NA	NA	100100473	100099318	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100099754_100100013_100100094_100100212
H1_mix_00079760	chr7	-	2559	14	FSM	ENSG00000106290.16	ENST00000472509.6	2551	14	0	-8	0	0	multi-exon	FALSE	canonical	3	921	junction_11	61.1203101079527	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTGCAGTCCTTCCTGC	5292	False	NA	-2	True	AATAAA	-22	NA	100114558	100107069	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100107624_100107925_100108124_100108366_100108541_100109947_100110074_100110199_100110275_100111138_100111322_100111727_100111830_100111921_100112000_100112107_100112254_100112797_100112918_100113348_100113406_100113615_100113770_100113867_100113955_100114053
H1_mix_00079761	chr7	-	2736	15	FSM	ENSG00000106290.16	ENST00000344095.8	2727	15	0	-9	0	0	multi-exon	FALSE	canonical	3	161	junction_14	231.919991921915	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTGCAGTCCTTCCTGC	2	True	NA	-2	True	AATAAA	-22	NA	100119346	100107069	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100107624_100107925_100108124_100108366_100108541_100109947_100110074_100110199_100110275_100111138_100111322_100111727_100111830_100111921_100112000_100112107_100112254_100112797_100112918_100113348_100113406_100113615_100113770_100113867_100113955_100114053_100114269_100118879
H1_mix_00079762	chr7	-	2385	15	FSM	ENSG00000106290.16	ENST00000692408.1	2579	15	0	194	0	0	multi-exon	FALSE	canonical	3	258	junction_13	209.936251256987	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTGCAGTCCTTCCTGC	-1	True	NA	-2	True	AATAAA	-22	NA	100119349	100107069	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100107624_100107925_100108124_100108366_100108541_100109947_100110074_100110199_100110275_100111138_100111322_100111727_100111830_100111921_100112000_100112107_100112254_100112797_100112918_100113348_100113406_100113615_100113770_100113867_100113955_100114083_100114269_100119203
H1_mix_00079764	chr7	-	2318	15	FSM	ENSG00000106290.16	ENST00000437822.6	2318	15	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_14	269.714399213051	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGGAAGGAAGTTGTAGAT	9	True	NA	-42	True	NA	NA	NA	100119841	100107167	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100107624_100107925_100108124_100108366_100108541_100109947_100110074_100110199_100110275_100111138_100111322_100111727_100111830_100111921_100112000_100112107_100112254_100112797_100112918_100113348_100113406_100113615_100113770_100113867_100113955_100114053_100114269_100119694
H1_mix_00079766	chr7	-	1195	8	ISM	ENSG00000106290.16	ENST00000487288.2	2687	13	0	4714	0	1602	5prime_fragment	FALSE	canonical	3	161	junction_7	297.960139780406	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTACTCATCTACCTGATG	8193	False	NA	NA	False	NA	NA	NA	100118976	100111798	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_100111830_100111921_100112000_100112107_100112254_100112797_100112918_100113348_100113770_100113867_100113955_100114053_100114269_100118879
H1_mix_00079771	chr7	-	2005	10	FSM	ENSG00000146826.17	ENST00000457641.5	2005	10	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_6	9.67368838207952	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGACTAGTTTGTGTACT	9350	False	NA	-2	True	ATTAAA	-21	NA	100158020	100154419	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100155165_100155261_100155456_100155670_100155826_100156385_100156550_100156633_100156717_100156844_100156993_100157093_100157215_100157372_100157460_100157632_100157763_100157842
H1_mix_00079772	chr7	-	2559	11	FSM	ENSG00000146826.17	ENST00000316937.8	2555	11	0	-4	0	1	multi-exon	FALSE	canonical	3	35	junction_6	10.8921990433521	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGACTAGTTTGTGTACTG	-20	True	NA	-1	True	ATTAAA	-22	NA	100158723	100154418	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100155165_100155261_100155456_100155670_100155826_100156385_100156550_100156633_100156717_100156844_100156993_100157093_100157215_100157372_100157460_100157632_100157763_100157842_100157939_100158088
H1_mix_00079774	chr7	-	2403	4	FSM	ENSG00000197093.11	ENST00000360039.9	2405	4	0	2	0	-2	multi-exon	FALSE	canonical	3	14	junction_3	7.54247233265651	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACTTGATTTATGGAGGG	-11	True	NA	-5	True	AATAAA	-13	NA	100168617	100159245	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100160960_100166501_100166806_100166970_100167284_100168545
H1_mix_00079776	chr7	-	826	4	FSM	ENSG00000213420.8	ENST00000486702.1	787	4	-39	0	-39	0	multi-exon	FALSE	canonical	3	99	junction_1	12.7104506432917	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCCAGTAGGGGAGACAC	5105	False	NA	NA	False	NA	NA	NA	100172257	100171068	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100171437_100171538_100171679_100171778_100171926_100172086
H1_mix_00079777	chr7	-	767	5	FSM	ENSG00000213420.8	ENST00000480087.5	767	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	45.3396901180412	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGGCCCCTTTTCCTTTG	-7	True	NA	NA	False	NA	NA	NA	100177369	100172189	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100172218_100173834_100173998_100174684_100174766_100176206_100176366_100177033
H1_mix_00079778	chr7	-	3527	8	FSM	ENSG00000239521.10	ENST00000328453.9	3526	8	0	-1	0	1	multi-exon	FALSE	canonical	2	2	junction_1	43.0576263125764	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTGATTTTTCTGGAA	-6	True	NA	NA	False	ATTAAA	-28	NA	100272206	100200651	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100202604_100211393_100211995_100213046_100213134_100222596_100222721_100223569_100223699_100223881_100224076_100233603_100233675_100271837
H1_mix_00079779	chr7	-	2841	6	FSM	ENSG00000239521.10	ENST00000543273.5	2840	6	0	-1	0	1	multi-exon	FALSE	canonical	3	6	junction_1	39.8768103037342	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTGATTTTTCTGGAA	-8	True	NA	NA	False	ATTAAA	-28	NA	100272208	100200651	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100202604_100222596_100222721_100223569_100223699_100223881_100224076_100233603_100233675_100271837
H1_mix_00079780	chr7	-	1053	7	NIC	ENSG00000239521.10	novel	3526	8	NA	NA	0	-220	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	38.7014929370374	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCTTGCAGAACCCGGC	-14	True	NA	NA	False	CATAAA	-3	NA	100272214	100202532	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_100202604_100213046_100213134_100222596_100222721_100223569_100223699_100223881_100224076_100233603_100233675_100271837
H1_mix_00079781	chr7	-	4041	7	ISM	ENSG00000239521.10	ENST00000328453.9	3526	8	-8	8283	0	2648	5prime_fragment	FALSE	canonical	3	7	junction_1	37.4851822576453	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCTAAGTGTATCTTTT	-14	True	NA	-4	True	AATAAA	-17	NA	100272214	100208935	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_100211995_100213046_100213134_100222596_100222721_100223569_100223699_100223881_100224076_100233603_100233675_100271837
H1_mix_00079782	chr7	-	2007	6	FSM	ENSG00000239521.10	ENST00000414739.3	2007	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	24.121359828998	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATAACCTGTCCTCCTTT	-14	True	NA	-3	True	AATAAA	-29	NA	100272214	100212021	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100213134_100222596_100222721_100223569_100223699_100223881_100224076_100233603_100233675_100271837
H1_mix_00079783	chr7	-	1110	4	FSM	ENSG00000239521.10	ENST00000689058.1	856	4	-254	0	-60	0	multi-exon	FALSE	canonical	3	105	junction_3	2.05480466765633	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGGTGCATATTTGTA	NA	False	NA	0	True	AATACA	-13	NA	100272278	100223294	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100223699_100223881_100224076_100233603_100233675_100271837
H1_mix_00079786	chr7	-	916	7	FSM	ENSG00000078319.11	ENST00000691424.1	1180	7	24	240	0	3	multi-exon	FALSE	canonical	3	76	junction_6	79.5684541064415	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTCCGGTGTTCTGGAA	-17	False	NA	4	True	AATAAA	-27	NA	100335975	100320904	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100321085_100325690_100325780_100328835_100329020_100330181_100330285_100330462_100330550_100332441_100332577_100335837
H1_mix_00079787	chr7	-	1073	8	FSM	ENSG00000078319.11	ENST00000689267.1	1140	8	65	2	2	0	multi-exon	FALSE	canonical	3	9	junction_7	99.4006528948295	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCCCCTGGGTCCGGTG	8	True	NA	-4	True	AATAAA	-19	NA	100335912	100320912	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100321085_100325690_100325780_100328835_100329020_100330181_100330285_100330462_100330550_100332441_100332582_100335205_100335429_100335837
H1_mix_00079788	chr7	-	1017	7	FSM	ENSG00000078319.11	ENST00000685901.1	1071	7	50	4	0	0	multi-exon	FALSE	canonical	2	18	junction_6	92.2112610621212	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCCCCTGGGTCCGGTG	4	True	NA	-4	True	AATAAA	-19	NA	100335916	100320912	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100321085_100325690_100325780_100328835_100329020_100330181_100330285_100330462_100330550_100332441_100332582_100335674
H1_mix_00079791	chr7	-	719	4	FSM	ENSG00000078319.11	ENST00000686263.1	758	4	28	11	3	-10	multi-exon	FALSE	canonical	3	76	junction_3	93.7028399901637	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCATTGGTTTTCATTAT	2	True	NA	65	True	AATAAA	-7	NA	100335956	100329906	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100330285_100330462_100330550_100332441_100332577_100335837
H1_mix_00079792	chr7	-	604	4	FSM	ENSG00000078319.11	ENST00000675836.2	757	4	63	90	0	2	multi-exon	FALSE	canonical	3	242	junction_3	24.3082062046727	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTGTTAAAAAAATTGGT	4	True	NA	-15	True	AATAAA	-21	NA	100335916	100329986	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100330285_100330462_100330550_100332441_100332582_100335837
H1_mix_00079795	chr7	-	769	2	FSM	ENSG00000160813.7	ENST00000470295.5	758	2	0	-11	0	11	multi-exon	FALSE	canonical	3	776	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAGGCCTAAAATGGGGT	556	False	NA	-12	True	AATAAA	-29	NA	100436136	100435270	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100435534_100435630
H1_mix_00079796	chr7	-	976	3	FSM	ENSG00000160813.7	ENST00000487452.1	965	3	0	-11	0	11	multi-exon	FALSE	canonical	3	652	junction_2	62	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAGGCCTAAAATGGGGT	269	False	NA	-12	True	AATAAA	-29	NA	100436423	100435270	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100435534_100435630_100435768_100435847
H1_mix_00079797	chr7	-	974	4	FSM	ENSG00000160813.7	ENST00000292330.3	963	4	0	-11	0	11	multi-exon	FALSE	canonical	3	480	junction_3	121.369957842403	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAGGCCTAAAATGGGGT	-18	True	NA	-12	True	AATAAA	-29	NA	100436497	100435270	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100435534_100435630_100435768_100435847_100436065_100436140
H1_mix_00079798	chr7	-	566	2	FSM	ENSG00000160813.7	ENST00000476185.1	474	2	-66	-26	0	25	multi-exon	FALSE	canonical	3	94	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGGTTAAAAGCTCTCTAG	556	False	NA	2	True	AATAAA	-43	NA	100436136	100435256	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100435534_100435847
H1_mix_00079799	chr7	-	2332	5	FSM	ENSG00000166925.9	ENST00000300181.7	2318	5	0	-14	0	14	multi-exon	FALSE	canonical	3	83	junction_4	22.7307610959246	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGTTCGTTGCTTGTGTT	-24	True	NA	3	True	ATTAAA	-34	NA	100479214	100466504	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100467169_100467551_100467601_100474273_100474441_100477276_100478308_100478793
H1_mix_00079800	chr7	-	1111	6	FSM	ENSG00000205307.12	ENST00000622764.3	1111	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	18.0776104615627	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTCCGTGTGGCTGGGA	-9	True	NA	-32	True	AATAAA	-20	NA	100573900	100572227	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100572572_100572653_100572752_100572859_100573014_100573105_100573213_100573296_100573401_100573596
H1_mix_00079801	chr7	-	4415	16	FSM	ENSG00000274272.1	ENST00000485071.2	4401	16	0	-14	0	14	multi-exon	FALSE	canonical	3	24	junction_4	85.1264157983094	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCTGGGAGCAGAGTAAG	7484	False	NA	-22	True	AATAAA	-30	NA	100578700	100572217	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100572572_100572653_100572752_100572859_100573014_100573105_100573213_100573296_100575783_100575870_100576009_100576237_100576324_100576693_100577006_100577085_100577155_100577272_100577390_100577496_100577559_100577663_100577741_100577821_100577913_100578158_100578259_100578398_100578512_100578649
H1_mix_00079802	chr7	-	4566	22	Fusion	ENSG00000077454.17_ENSG00000205307.12	novel	3177	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	24	junction_4	77.1347732389899	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAATAAAACAGTGTTGGT	9	True	NA	-60	True	NA	NA	NA	100586129	100572255	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_-_100572572_100572653_100572752_100572859_100573014_100573105_100573213_100573296_100575305_100575704_100575783_100575870_100576009_100576237_100576324_100576693_100576778_100576901_100577006_100577085_100577155_100577272_100577390_100577496_100577559_100577663_100577741_100577821_100577913_100578158_100578259_100578398_100578512_100578649_100578787_100581776_100581883_100582040_100582168_100582314_100582460_100585880
H1_mix_00079803	chr7	-	3177	18	FSM	ENSG00000077454.17	ENST00000310300.11	3177	18	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_11	22.7573327473064	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCTGAGAGCACGTGC	9	True	NA	-9	True	AATAAA	-39	NA	100586129	100574010	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100575305_100575704_100575783_100575870_100576009_100576237_100576324_100576693_100576778_100576901_100577006_100577085_100577155_100577272_100577390_100577496_100577559_100577663_100577741_100577821_100577913_100578158_100578259_100578398_100578512_100578649_100578787_100581776_100581883_100582040_100582168_100582314_100582460_100585880
H1_mix_00079804	chr7	-	2471	18	NNC	ENSG00000077454.17	novel	3177	18	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_13	56.1193735090208	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGCCCTGCCTGTGTGTGT	66	False	NA	-9	True	TATAAA	-15	NA	100586118	100574659	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_100575305_100575704_100575783_100575870_100576009_100576237_100576324_100576693_100576778_100576901_100577006_100577085_100577155_100577272_100577390_100577496_100577559_100577663_100577741_100577821_100577913_100578158_100578259_100578398_100578466_100578649_100578787_100581776_100581883_100582040_100582168_100582314_100582460_100585880
H1_mix_00079805	chr7	-	2400	17	NIC	ENSG00000077454.17	novel	3177	18	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_7	58.2655223416902	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGCCCTGCCTGTGTGTGT	66	False	NA	-9	True	TATAAA	-15	NA	100586118	100574659	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_100575305_100575704_100575783_100575870_100576009_100576237_100576324_100576693_100576778_100576901_100577006_100577085_100577155_100577496_100577559_100577663_100577741_100577821_100577913_100578158_100578259_100578398_100578512_100578649_100578787_100581776_100581883_100582040_100582168_100582314_100582460_100585880
H1_mix_00079809	chr7	-	2429	15	FSM	ENSG00000106327.13	ENST00000476304.5	2421	15	0	-8	0	0	multi-exon	FALSE	canonical	3	16	junction_3	5.40785520878506	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTTCAATATCAATAAACC	9093	False	NA	NA	False	NA	NA	NA	100633650	100620454	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100621127_100626762_100626904_100627263_100627492_100627576_100627662_100627743_100627821_100627906_100627975_100628072_100628137_100628223_100628307_100629252_100629373_100630888_100631053_100631805_100631946_100632081_100632199_100633000_100633124_100633228_100633341_100633415
H1_mix_00079810	chr7	-	734	6	ISM	ENSG00000077080.10	ENST00000160382.10	1524	14	9098	3	388	-3	3prime_fragment	FALSE	canonical	3	21	junction_5	6.61513416341649	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTTGGCCTCCGTGGGG	9062	False	NA	NA	False	AGTAAA	-17	NA	100647350	100643099	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_100643327_100646248_100646336_100646550_100646647_100646750_100646832_100646970_100647086_100647222
H1_mix_00079813	chr7	-	6754	27	FSM	ENSG00000146830.11	ENST00000678049.1	6559	27	-195	0	-195	0	multi-exon	FALSE	canonical	3	31	junction_26	14.6157894680769	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCGCCTCCACTGCTCGT	4	True	NA	-8	True	AATAAA	-20	NA	100694445	100679506	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100681772_100681863_100681994_100682071_100682236_100682321_100682483_100682589_100682778_100683011_100683231_100683303_100683445_100683549_100683633_100683817_100683919_100684019_100684158_100684236_100684338_100684449_100684617_100684722_100684895_100685048_100685147_100685343_100685482_100685973_100686080_100686179_100686434_100686648_100686820_100687005_100687047_100687297_100687407_100687504_100687617_100687787_100687884_100687980_100688111_100688203_100688308_100688450_100688516_100688591_100689556_100694109
H1_mix_00079816	chr7	-	656	3	FSM	ENSG00000146830.11	ENST00000464111.1	656	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	5.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAACGGGGATGGGGACG	7690	False	NA	NA	False	NA	NA	NA	100686759	100685396	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100685482_100685973_100686434_100686648
H1_mix_00079819	chr7	-	4353	17	FSM	ENSG00000196411.10	ENST00000358173.8	4353	17	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_16	42.5175974597578	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGGGGTGATGGACTAGA	-4	True	NA	-9	True	AATAAA	-32	NA	100827523	100802564	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100803591_100805165_100805322_100805500_100805695_100806419_100806570_100807364_100807581_100812746_100812995_100813094_100813209_100813651_100813717_100813918_100814022_100817191_100817358_100818519_100818645_100819556_100819890_100820140_100820297_100822270_100822668_100823643_100823932_100824202_100824274_100826978
H1_mix_00079822	chr7	-	310	3	NNC	ENSG00000236305.2	novel	276	2	NA	NA	-1	-235	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTCGGAGGCCTGGGGC	-17	True	NA	NA	False	NA	NA	NA	100852636	100837548	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_100837580_100851975_100852132_100852513
H1_mix_00079823	chr7	-	1225	1	FSM	ENSG00000176125.7	ENST00000388761.4	995	1	17	-247	17	247	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGAGGTGAGAGGTACAG	-8	True	NA	NA	False	NA	NA	NA	100889698	100888473	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100888500_100889700
H1_mix_00079825	chr7	-	2950	5	FSM	ENSG00000087085.16	ENST00000302913.8	2956	5	7	-1	7	0	multi-exon	FALSE	canonical	3	8	junction_4	6.12372435695795	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGAGTGTGCGCGACTAGG	1072	False	NA	-4	True	AATAAA	-13	NA	100895913	100889993	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100891089_100891168_100891339_100892333_100892819_100893164_100894253_100895801
H1_mix_00079826	chr7	-	598	2	ISM	ENSG00000087085.16	ENST00000412389.5	2218	4	2964	-3	2809	0	3prime_fragment	FALSE	canonical	3	32	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGAGTGTGCGCGACTAGG	5561	False	NA	-4	True	AATAAA	-13	NA	100891424	100889993	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_100890336_100891168
H1_mix_00079827	chr7	-	377	3	FSM	ENSG00000227053.2	ENST00000448513.2	442	3	64	1	7	0	multi-exon	FALSE	canonical	3	48	junction_2	5	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTGGTGGTATTCTGTT	-3	True	NA	-1	True	AATAAA	-21	NA	101017601	101014319	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_101014440_101015197_101015268_101017414
H1_mix_00079828	chr7	-	1158	1	ISM	ENSG00000128564.8	ENST00000249330.3	2551	2	1903	0	1448	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTCTCGGTTATTCAC	9745	False	NA	-1	True	AATAAA	-20	NA	101163666	101162508	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_101162500_101163700
H1_mix_00079833	chr7	-	2829	19	FSM	ENSG00000106397.12	ENST00000223127.8	2821	19	0	-8	0	1	multi-exon	FALSE	canonical	3	133	junction_15	16.478287247687	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTGGTCTGCCCATTAA	12	True	NA	-3	True	AATAAA	-22	NA	101217581	101205975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_101206437_101206778_101206905_101207577_101207725_101208852_101208958_101210092_101210162_101210330_101210445_101210531_101210674_101211590_101211717_101211845_101211951_101212252_101212375_101212529_101212656_101212841_101212944_101213106_101213205_101215088_101215153_101215907_101216021_101216162_101216327_101216409_101216547_101216694_101216787_101217165
H1_mix_00079836	chr7	-	745	4	FSM	ENSG00000214253.9	ENST00000449367.5	745	4	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_3	248.463724157516	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCCTGAAGCCATGTCCT	1	True	NA	NA	False	NA	NA	NA	101245075	101239457	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_101239904_101240141_101240248_101240829_101240907_101244959
H1_mix_00079837	chr7	-	884	5	FSM	ENSG00000214253.9	ENST00000223136.5	870	5	0	-14	0	0	multi-exon	FALSE	canonical	3	525	junction_4	47.7094068292617	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCCTGAAGCCATGTCCT	-5	True	NA	NA	False	NA	NA	NA	101245081	101239457	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_101239904_101240141_101240248_101240829_101240907_101244006_101244140_101244959
H1_mix_00079838	chr7	-	644	4	FSM	ENSG00000214253.9	ENST00000442303.1	631	4	0	-13	0	0	multi-exon	FALSE	canonical	2	13	junction_3	291.356597087944	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGAGGGGTGGGTTCTGAA	7251	False	NA	17	True	AATAAA	-39	NA	101245048	101239593	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_101239904_101240141_101240248_101240829_101240907_101244897
H1_mix_00079839	chr7	-	915	4	FSM	ENSG00000214253.9	ENST00000474120.5	915	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_3	258.833279673744	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGAGGGGTGGGTTCTGAA	-17	True	NA	17	True	AATAAA	-39	NA	101252316	101239593	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_101239904_101240141_101240248_101240829_101240907_101251894
H1_mix_00079840	chr7	-	2263	3	FSM	ENSG00000128581.17	ENST00000621899.4	2272	3	9	0	-2	0	multi-exon	FALSE	canonical	3	12	junction_2	126.5	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATTGAAGTG	-36	True	NA	NA	False	NA	NA	NA	101321814	101313366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_101315283_101316339_101316543_101321670
H1_mix_00079841	chr7	-	1324	5	FSM	ENSG00000128581.17	ENST00000315322.10	4881	5	48	3509	0	-248	multi-exon	FALSE	canonical	3	228	junction_2	17.0055138117024	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACTTTGGGAGGCCAAGG	14	True	NA	NA	False	NA	NA	NA	101321764	101314422	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_101315283_101316339_101316543_101318123_101318214_101318955_101319033_101321670
H1_mix_00079842	chr7	-	917	4	FSM	ENSG00000128581.17	ENST00000498704.6	917	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	102.704538469447	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAACAAATACCGACTGGC	14	True	NA	25	True	NA	NA	NA	101321764	101314752	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_101315283_101316339_101316543_101318123_101318214_101321670
H1_mix_00079843	chr7	-	882	4	FSM	ENSG00000128581.17	ENST00000437644.2	875	4	0	-7	0	0	multi-exon	FALSE	canonical	3	27	junction_2	114.126635317479	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGCTTGAATGTGATTT	1	True	NA	-10	True	NA	NA	NA	101321777	101314787	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_101315283_101316339_101316543_101318955_101319033_101321670
H1_mix_00079846	chr7	-	1960	1	NIC	ENSG00000260097.3	novel	3151	8	NA	NA	462	-8277	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCCCAGAAGTCAGGAAGG	NA	False	NA	NA	False	AAAAAG	-8	NA	102355982	102354022	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_102354000_102356000
H1_mix_00079847	chr7	-	2092	3	FSM	ENSG00000160993.4	ENST00000292566.4	2092	3	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	4.5	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCTCACCTCCCACTACA	-6	True	NA	-21	True	AATAAA	-20	NA	102464863	102456237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_102457982_102459603_102459802_102464713
H1_mix_00079848	chr7	-	932	4	FSM	ENSG00000005075.16	ENST00000292614.10	937	4	15	-10	15	10	multi-exon	FALSE	canonical	3	2614	junction_3	164.719964384001	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCCCATCGGCCCAAAGC	6	True	NA	-1	True	AATAAA	-25	NA	102478907	102473117	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_102473685_102474360_102474536_102476180_102476271_102478807
H1_mix_00079849	chr7	-	3142	5	FSM	ENSG00000170667.15	ENST00000477184.5	1787	5	26	-1381	26	-1088	multi-exon	FALSE	canonical	3	61	junction_4	11.7340317027013	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAGAAGATATTTAACCA	NA	False	NA	NA	False	AATAAA	-10	NA	102493285	102481063	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_102483714_102483824_102483890_102485038_102485160_102488462_102488599_102493115
H1_mix_00079850	chr7	-	306	4	ISM	ENSG00000170667.15	ENST00000541662.5	2794	20	59	26460	37	-26037	5prime_fragment	FALSE	canonical	3	17	junction_3	16.7597401199687	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTCTCCCTTCCCTCC	60	False	NA	NA	False	NA	NA	NA	102517718	102509598	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_102509661_102510178_102510293_102511924_102511982_102517645
H1_mix_00079852	chr7	-	2555	8	FSM	ENSG00000168255.20	ENST00000489144.5	2553	8	0	-2	0	2	multi-exon	FALSE	canonical	3	222	junction_5	670.944110936224	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTCCGTGACATCATAC	13	False	NA	-18	True	AATAAA	-19	NA	102572567	102537915	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_102538526_102539605_102539727_102540014_102540092_102541092_102541304_102541500_102541663_102566996_102568185_102569834_102569925_102572471
H1_mix_00079854	chr7	-	1601	9	FSM	ENSG00000168255.20	ENST00000379340.9	1598	9	0	-3	0	2	multi-exon	FALSE	canonical	3	222	junction_5	639.302158607336	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTCCGTGACATCATAC	41	False	NA	-18	True	AATAAA	-19	NA	102572539	102537915	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_102538526_102539605_102539727_102540014_102540092_102541092_102541304_102541500_102541663_102566996_102567084_102568009_102568185_102569834_102569925_102572471
H1_mix_00079855	chr7	-	1050	6	NIC	ENSG00000168255.20	novel	1598	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_3	221.611913037183	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTGTCCGTGACATCA	41	False	NA	-21	True	AATAAA	-16	NA	102572539	102537918	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_102538526_102539605_102539727_102540014_102540092_102566996_102567084_102569834_102569925_102572471
H1_mix_00079856	chr7	-	1867	11	NIC	ENSG00000168255.20	novel	1598	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_6	620.621019624698	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTGTCCGTGACATCA	21	False	NA	-21	True	AATAAA	-16	NA	102572559	102537918	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_102538526_102539605_102539727_102540014_102540092_102541092_102541304_102541500_102541663_102543524_102543703_102544705_102544777_102566996_102567084_102568009_102568185_102569834_102569925_102572471
H1_mix_00079857	chr7	-	1476	8	FSM	ENSG00000168255.20	ENST00000486319.5	1532	8	56	0	-10	0	multi-exon	FALSE	canonical	3	222	junction_5	157.46603132234	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCTGTCCGTGACATC	NA	False	NA	-22	True	AATAAA	-15	NA	102572593	102537919	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_102538526_102539605_102539727_102540014_102540092_102541092_102541304_102541500_102541663_102566996_102567084_102569834_102569925_102572471
H1_mix_00079865	chr7	-	4630	3	FSM	ENSG00000285437.2	ENST00000511313.5	4630	3	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_1	216	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAGAAAATTAGCTTTA	NA	False	NA	NA	False	AATAAA	-34	NA	102572583	102562655	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_102567084_102569834_102569925_102572471
H1_mix_00079866	chr7	-	2096	3	ISM	ENSG00000168255.20	ENST00000489144.5	2553	8	-13	28370	3	-22720	5prime_fragment	FALSE	canonical	3	659	junction_2	796	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAAAAAAAGGTCC	0	True	NA	NA	False	NA	NA	NA	102572580	102566287	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_102568185_102569834_102569925_102572471
H1_mix_00079867	chr7	-	1085	4	FSM	ENSG00000285437.2	ENST00000621093.4	348	4	0	-737	0	313	multi-exon	FALSE	canonical	3	280	junction_1	853.941580099144	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCAACAAGAGTGAAACGT	59	False	NA	NA	False	NA	NA	NA	102572521	102566313	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_102567084_102568009_102568185_102569834_102569925_102572471
H1_mix_00079870	chr7	-	729	2	FSM	ENSG00000285437.2	ENST00000504101.1	729	2	0	0	0	0	multi-exon	FALSE	canonical	3	659	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGCCCGGCCTTACATT	0	True	NA	NA	False	NA	NA	NA	102572580	102569304	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_102569925_102572471
H1_mix_00079872	chr7	-	3209	20	FSM	ENSG00000105808.19	ENST00000461209.5	3244	20	35	0	35	0	multi-exon	FALSE	canonical	3	40	junction_5	17.5295555722202	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTCTGGGGTCTTGTGA	5197	False	NA	NA	False	AGTAAA	-16	NA	102611556	102582322	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_102582893_102583003_102583069_102584217_102584339_102587634_102587771_102590158_102590297_102592284_102592455_102592993_102593139_102593706_102593845_102594049_102594243_102594446_102594560_102595304_102595370_102595633_102595785_102596011_102596130_102599859_102599955_102600256_102600389_102602323_102602406_102605857_102605988_102608760_102608823_102609340_102609455_102611085
H1_mix_00079873	chr7	-	2789	20	FSM	ENSG00000105808.19	ENST00000449970.6	2787	20	0	-2	0	0	multi-exon	FALSE	canonical	3	20	junction_19	19.4085682309547	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTCTGGGGTCTTGTGA	-3	True	NA	NA	False	AGTAAA	-16	NA	102616756	102582322	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_102582893_102583003_102583069_102584217_102584339_102587634_102587771_102592284_102592455_102592993_102593139_102593706_102593845_102594049_102594243_102594446_102594560_102595304_102595370_102595633_102595785_102596011_102596130_102599859_102599955_102600256_102600389_102602323_102602406_102605857_102605988_102608760_102608823_102609340_102609455_102611085_102611143_102616624
H1_mix_00079874	chr7	-	1786	6	FSM	ENSG00000267368.1	ENST00000340457.8	1342	6	-444	0	-444	0	multi-exon	FALSE	canonical	3	177	junction_5	110.31699778366	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTGTCCGTGACATCA	NA	False	NA	-7	True	AATAAA	-16	NA	102643235	102637024	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_102637634_102638713_102638835_102639122_102639200_102640203_102640415_102640611_102640774_102642629
H1_mix_00079875	chr7	-	1622	9	FSM	ENSG00000267645.5	ENST00000476151.5	1598	9	0	-24	0	24	multi-exon	FALSE	canonical	3	215	junction_5	305.631620582688	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTGTCCGTGACATCA	96	False	NA	-7	True	AATAAA	-16	NA	102671641	102637024	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_102637634_102638713_102638835_102639122_102639200_102640203_102640415_102640611_102640774_102666076_102666164_102667089_102667265_102668914_102669005_102671551
H1_mix_00079876	chr7	-	1447	8	NIC	ENSG00000267645.5	novel	1598	9	NA	NA	0	24	combination_of_known_splicesites	FALSE	canonical	3	168	junction_6	121.339967673896	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTGTCCGTGACATCA	96	False	NA	-7	True	AATAAA	-16	NA	102671641	102637024	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_102637634_102638713_102638835_102639122_102639200_102640203_102640415_102640611_102640774_102666076_102666164_102668914_102669005_102671551
H1_mix_00079877	chr7	-	2065	3	FSM	ENSG00000228049.7	ENST00000358438.6	2065	3	0	0	0	0	multi-exon	FALSE	canonical	3	494	junction_2	377	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAAAAAAAGTCC	2	True	NA	NA	False	NA	NA	NA	102671629	102665367	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_102667265_102668914_102669005_102671551
H1_mix_00079879	chr7	-	716	6	ISM	ENSG00000233297.4	ENST00000460726.2	1199	9	774	229	774	-229	internal_fragment	FALSE	canonical	3	19	junction_5	25.3724259778209	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTCTTGCCCACCTGGG	NA	False	NA	NA	False	NA	NA	NA	102689695	102682064	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_102682130_102683278_102683400_102686713_102686850_102688194_102688365_102688903_102689049_102689616
H1_mix_00079880	chr7	-	548	3	FSM	ENSG00000161040.17	ENST00000468216.1	560	3	12	0	12	0	multi-exon	FALSE	canonical	1	1	junction_2	2	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCGAGGTAATGTTTGT	NA	False	NA	NA	False	NA	NA	NA	102933723	102926282	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_102926375_102931880_102931934_102933320
H1_mix_00079885	chr7	-	663	1	FSM	ENSG00000224415.1	ENST00000432746.1	591	1	4	-76	4	76	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGCTTGCAAAAAAAAAAAAA	7644	False	NA	NA	False	ATTAAA	-19	NA	103141935	103141272	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_103141300_103141900
H1_mix_00079886	chr7	-	3006	3	FSM	ENSG00000170629.15	ENST00000446373.2	3040	3	34	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	1	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGAGTCTGGACTTTGG	13	True	NA	NA	False	AATAAA	-12	NA	103280277	103273091	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_103275628_103277613_103277639_103279832
H1_mix_00079888	chr7	-	1952	16	FSM	ENSG00000105821.15	ENST00000475065.5	1952	16	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_13	146.787314014378	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTCATTCTTAAAATTA	2915	False	NA	-8	True	AATAAA	-18	NA	103341937	103312518	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_103312644_103312946_103313102_103315763_103315872_103315987_103316089_103316829_103317015_103319608_103319679_103319755_103319845_103321931_103322082_103322510_103322795_103323597_103323664_103324481_103324563_103326542_103326685_103327331_103327379_103327655_103327755_103337735_103337812_103341763
H1_mix_00079890	chr7	-	909	5	FSM	ENSG00000189056.15	ENST00000681199.1	3014	5	1382	723	1382	-723	multi-exon	FALSE	canonical	2	3	junction_3	3.90512483795333	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTCTTTTCTTACAAATT	NA	False	NA	NA	False	NA	NA	NA	103557159	103545123	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_103545345_103551066_103551297_103553460_103553564_103553659_103553832_103556976
H1_mix_00079891	chr7	-	1926	14	FSM	ENSG00000164815.11	ENST00000297431.9	1924	14	0	-2	0	2	multi-exon	FALSE	canonical	3	200	junction_5	26.5835736975401	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGTATTTATCTTTTC	-4	True	NA	1	True	AATAAA	-26	NA	104208013	104126338	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_104126894_104136780_104136894_104161071_104161183_104165234_104165283_104166771_104166885_104168472_104168526_104183942_104184034_104184122_104184172_104188250_104188382_104195142_104195255_104197724_104197800_104200757_104200959_104204141_104204235_104207832
H1_mix_00079894	chr7	-	2667	1	FSM	ENSG00000272918.1	ENST00000607968.1	2646	1	148	-169	148	169	mono-exon	FALSE	NA	NA	NA	NA	NA	230	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGCTTAAGTCTGACAGT	NA	False	NA	NA	False	AAAAAG	-18	NA	105105335	105102668	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_105102700_105105300
H1_mix_00079895	chr7	-	3716	17	NIC	ENSG00000135250.17	novel	3679	16	NA	NA	0	0	intron_retention	FALSE	canonical	2	15	junction_15	94.3676321627283	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCCTTGGTCATTGCCC	11	True	NA	-2	True	ATTAAA	-26	NA	105388894	105116373	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_105118023_105126247_105126341_105126992_105127063_105132790_105132899_105133003_105133105_105142007_105142491_105143083_105143331_105145282_105145309_105146492_105146659_105160506_105160614_105167376_105167465_105168007_105168096_105169156_105169266_105203627_105203786_105268805_105268870_105388647_105388703_105388790
H1_mix_00079897	chr7	-	1336	6	FSM	ENSG00000135250.17	ENST00000477925.5	1336	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	132.947207567515	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCATTCCTGTATTATAG	4302	False	NA	-95	True	AAGAAA	-39	NA	105142336	105117387	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_105118023_105125781_105125875_105126992_105127063_105132790_105132899_105133003_105133105_105142007
H1_mix_00079899	chr7	-	3525	16	FSM	ENSG00000091127.14	ENST00000469408.6	3525	16	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_4	27.8990242760487	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAGAATCTTGACCTTGA	0	True	NA	1	True	AATAAA	-28	NA	105522271	105456502	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_105457927_105459167_105459260_105462620_105462751_105465312_105465415_105468336_105468464_105470687_105470849_105472131_105472194_105481051_105481178_105482311_105482441_105491539_105491618_105495141_105495254_105502419_105502565_105505954_105506057_105506188_105506274_105508114_105508545_105522051
H1_mix_00079900	chr7	-	737	5	FSM	ENSG00000185055.11	ENST00000480514.6	737	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	6.96419413859206	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACCTGTATTTATATTTT	-17	True	NA	NA	False	AATAAA	-1	NA	105581493	105565123	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_105565448_105567466_105567491_105569202_105569291_105569406_105569572_105581357
H1_mix_00079901	chr7	-	1550	4	FSM	ENSG00000185055.11	ENST00000486180.5	1550	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0.816496580927726	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATGTCAAATGTTTAAGG	-10	True	NA	NA	False	NA	NA	NA	105581486	105566322	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_105567491_105569202_105569291_105569406_105569572_105581357
H1_mix_00079903	chr7	-	636	1	FSM	ENSG00000231167.3	ENST00000489612.1	999	1	180	183	180	-183	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATCAAGGAGATGAGAC	328	False	NA	NA	False	AATGAA	-6	NA	105583076	105582440	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_105582400_105583100
H1_mix_00079906	chr7	-	2634	4	ISM	ENSG00000146776.15	ENST00000474433.5	2732	9	38690	0	-15062	0	3prime_fragment	FALSE	canonical	3	64	junction_1	15.9373774505092	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTTTGATCTGATCTGTT	3085	False	NA	-1	True	ATTAAA	-16	NA	105639328	105613473	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_105614817_105620199_105620322_105624074_105624268_105638352
H1_mix_00079907	chr7	-	1470	4	FSM	ENSG00000146776.15	ENST00000318724.8	1470	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	23.6126143312331	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTTTCCTCATATATAA	7	True	NA	NA	False	AATAAA	-18	NA	105876582	105760372	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_105761464_105788603_105788709_105875811_105875881_105876377
H1_mix_00079909	chr7	-	2130	5	FSM	ENSG00000008282.9	ENST00000455385.7	2130	5	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_1	28.1424945589406	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGCACTGATTGTTAATA	301	False	106112346	NA	False	AATAAA	-15	NA	106112312	106090504	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_106091940_106092948_106093138_106097689_106097898_106099157_106099283_106112139
H1_mix_00079910	chr7	-	2282	6	FSM	ENSG00000008282.9	ENST00000470347.1	1193	6	0	-1089	0	137	multi-exon	FALSE	canonical	3	34	junction_1	281.664339240877	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAGACTATGGTTCTAT	46	True	NA	-10	True	AATAAA	-15	NA	106112221	106090367	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_106091940_106092563_106092670_106092948_106093138_106097689_106097898_106099157_106099283_106112139
H1_mix_00079911	chr7	-	529	2	FSM	ENSG00000008282.9	ENST00000460770.1	545	2	16	0	16	0	multi-exon	FALSE	canonical	3	577	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGGTGGGTTTAAAACT	8236	False	NA	NA	False	AATAAA	-19	NA	106093236	106091698	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_106091940_106092948
H1_mix_00079912	chr7	-	4502	11	FSM	ENSG00000105835.13	ENST00000681550.1	4489	11	0	-13	0	13	multi-exon	FALSE	canonical	3	147	junction_10	154.341698837352	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTGCTTCAAGTAATG	1279	False	NA	0	True	AATAAA	-40	NA	106284632	106248284	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_106251194_106253016_106253152_106254363_106254505_106261587_106261708_106263391_106263618_106268463_106268601_106269153_106269313_106272529_106272659_106274945_106275050_106277022_106277180_106284347
H1_mix_00079913	chr7	-	4373	11	FSM	ENSG00000105835.13	ENST00000222553.8	4360	11	0	-13	0	13	multi-exon	FALSE	canonical	3	577	junction_6	37.5085323626505	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTGCTTCAAGTAATG	13	True	NA	0	True	AATAAA	-40	NA	106284983	106248284	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_106251194_106253016_106253152_106254363_106254505_106261587_106261708_106263391_106263618_106268463_106268601_106269153_106269313_106272529_106272659_106274945_106275050_106277022_106277180_106284827
H1_mix_00079914	chr7	-	4554	12	FSM	ENSG00000105835.13	ENST00000681494.1	4546	12	0	-8	0	8	multi-exon	FALSE	canonical	1	2	junction_7	251.252235712268	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATTTGTGTGCTTCAAG	13	True	NA	-5	True	AATAAA	-35	NA	106284983	106248289	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_106251194_106253016_106253152_106254363_106254505_106261587_106261708_106263391_106263618_106268463_106268601_106269153_106269313_106269990_106270177_106272529_106272659_106274945_106275050_106277022_106277180_106284827
H1_mix_00079915	chr7	-	6023	5	FSM	ENSG00000105835.13	ENST00000681372.1	5972	5	-41	-10	-41	0	multi-exon	FALSE	canonical	3	629	junction_3	27.5363396260287	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACATCATTTATTAATTT	9846	False	NA	-24	True	ATTAAA	-18	NA	106267867	106250042	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_106251194_106253016_106253152_106254363_106254505_106261587_106261708_106263391
H1_mix_00079916	chr7	-	3897	3	FSM	ENSG00000105835.13	ENST00000680616.1	3897	3	0	0	0	0	multi-exon	FALSE	canonical	3	644	junction_1	28.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTTGTGTTATTGTACA	9713	False	NA	NA	False	AATAAA	-17	NA	106257483	106250551	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_106251194_106253016_106253152_106254363
H1_mix_00079921	chr7	-	4301	1	FSM	ENSG00000253276.5	ENST00000523505.3	6799	1	89	2409	89	-2409	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTGTCTAGTTTTTCTA	88	False	NA	NA	False	AATAAA	-13	NA	106661069	106656768	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_106656800_106661100
H1_mix_00079922	chr7	-	725	1	FSM	ENSG00000272072.1	ENST00000607036.1	742	1	46	-29	46	29	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAAGTTCCATATTTGCCA	NA	False	NA	NA	False	AATAAA	-45	NA	107193254	107192529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_107192500_107193300
H1_mix_00079923	chr7	-	4658	22	FSM	ENSG00000164597.15	ENST00000297135.9	4658	22	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_4	15.8128223753359	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATAGTAATCCTATATAT	-5	True	NA	-21	True	AATAAA	-30	NA	107563920	107201371	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_107203631_107210525_107210606_107211098_107211226_107230614_107230692_107236449_107236688_107248395_107248500_107256731_107256795_107258272_107258384_107281299_107281400_107283570_107283733_107298141_107298347_107324439_107324522_107362032_107362111_107362307_107362421_107372594_107372761_107412501_107412633_107527236_107527358_107548110_107548181_107548277_107548333_107554284_107554343_107557975_107558116_107563802
H1_mix_00079924	chr7	-	5431	21	FSM	ENSG00000164597.15	ENST00000393603.7	5418	21	0	-13	0	13	multi-exon	FALSE	canonical	3	115	junction_3	16.0078105935821	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTCTGACACCAGATG	233	False	NA	NA	False	AATAAA	-31	NA	107564261	107207834	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_107210606_107211098_107211226_107230614_107230692_107236449_107236688_107248395_107248500_107256731_107256795_107258272_107258384_107281299_107281400_107283570_107283733_107298141_107298347_107324439_107324522_107362032_107362111_107362307_107362421_107372594_107372761_107412501_107412633_107527236_107527358_107548110_107548181_107548277_107548333_107554284_107554343_107557975_107558116_107563802
H1_mix_00079925	chr7	-	823	2	FSM	ENSG00000241764.5	ENST00000653575.2	825	2	0	2	0	-2	multi-exon	FALSE	canonical	2	9	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTTGTAGTTGTACGGT	-7	True	NA	-1	True	AATAAA	-21	NA	107744104	107742752	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_107743404_107743932
H1_mix_00079926	chr7	-	5827	34	FSM	ENSG00000091136.15	ENST00000222399.11	5650	34	-177	0	-125	0	multi-exon	FALSE	canonical	3	150	junction_33	41.4244973501943	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTGTACTTGTTACTT	1082	False	NA	-9	True	AATAAA	-21	NA	108003338	107923798	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_107924088_107924229_107924390_107926182_107926360_107929063_107929206_107929411_107929620_107931355_107931501_107932173_107932378_107935414_107935657_107937092_107937278_107939988_107940359_107951225_107951323_107952008_107952224_107953529_107953755_107955466_107955631_107959248_107959481_107959690_107959835_107960444_107960650_107961205_107961330_107961548_107961677_107962904_107963064_107964551_107964688_107972991_107973072_107974985_107975099_107975233_107975414_107975688_107975878_107978046_107978168_107980608_107980812_107986021_107986086_107986174_107986364_107994886_107994961_107998356_107998493_108001557_108001734_108002848_108002972_108003110
H1_mix_00079927	chr7	-	583	3	FSM	ENSG00000091136.15	ENST00000393559.2	583	3	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_1	8.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTCCAAACCGCCTTAAGA	7	True	NA	NA	False	NA	NA	NA	108003160	107998397	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_107998493_108001557_108001734_108002848
H1_mix_00079929	chr7	-	4569	11	FSM	ENSG00000135241.17	ENST00000257694.13	4569	11	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_9	29.5805679458661	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGGCTTCTTTCTTTCT	-20	True	NA	NA	False	AATACA	-19	NA	108526135	108470416	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_108472676_108479183_108479380_108487758_108487954_108491409_108491468_108496583_108496756_108497482_108497578_108502490_108502643_108514143_108514294_108514435_108515575_108521475_108521522_108526028
H1_mix_00079930	chr7	-	3168	11	NIC	ENSG00000135241.17	novel	3530	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_9	47.9821841937192	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTTGTTAAAAGGCTAAT	44	True	NA	-14	True	AATAAA	-13	NA	108526071	108471626	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_108472676_108479183_108479380_108487758_108487954_108491409_108491468_108496583_108496756_108497482_108497578_108502490_108502643_108514143_108514294_108514435_108515448_108521475_108521522_108526028
H1_mix_00079931	chr7	-	4320	10	FSM	ENSG00000135241.17	ENST00000453144.5	3366	10	244	-1198	0	-7	multi-exon	FALSE	canonical	3	25	junction_9	42.6730319326034	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGAACTCTGGCCATGGC	44	True	NA	NA	False	AATACA	-7	NA	108526071	108470428	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_108472676_108479183_108479380_108487758_108487954_108491409_108491468_108496583_108496756_108497482_108497578_108502490_108502643_108514143_108514294_108514435_108515448_108526028
H1_mix_00079932	chr7	-	3457	10	FSM	ENSG00000135241.17	ENST00000436062.5	3462	10	5	0	2	0	multi-exon	FALSE	canonical	3	66	junction_9	30.1809358517739	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCTATCATTAACAAAAATA	1847	False	NA	-48	True	TATAAA	-27	NA	108526313	108471660	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_108472676_108479183_108479380_108487758_108487954_108491409_108491468_108496583_108496756_108497482_108497578_108502490_108502643_108514143_108514294_108514435_108515575_108526028
H1_mix_00079933	chr7	-	3434	3	FSM	ENSG00000177683.14	ENST00000438865.1	868	3	44	-2610	0	172	multi-exon	FALSE	canonical	3	14	junction_1	31	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACGTCCATCCTTACTCT	-42	True	NA	NA	False	AAAACA	-15	NA	108569706	108561959	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_108565106_108565951_108566023_108569489
H1_mix_00079934	chr7	-	3180	2	FSM	ENSG00000177683.14	ENST00000493722.1	880	2	-43	-2257	0	7	multi-exon	FALSE	canonical	3	15	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATCCAAAATGCTCCAAA	-24	True	NA	96	True	AATAAA	-25	NA	108569688	108562124	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_108565106_108569489
H1_mix_00079935	chr7	-	3538	3	FSM	ENSG00000177683.14	ENST00000415914.4	3384	3	18	-172	0	172	multi-exon	FALSE	canonical	3	50	junction_1	13	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACGTCCATCCTTACTCT	-24	True	NA	NA	False	AAAACA	-15	NA	108569688	108561959	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_108565106_108565829_108566023_108569489
H1_mix_00079936	chr7	-	4180	2	FSM	ENSG00000177683.14	ENST00000484452.1	1051	2	-83	-3046	-21	7	multi-exon	FALSE	canonical	3	76	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATCCAAAATGCTCCAAA	2111	False	NA	96	True	AATAAA	-25	NA	108569771	108562124	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_108566023_108569489
H1_mix_00079939	chr7	-	770	5	NNC	ENSG00000234273.1	novel	388	4	NA	NA	-148	-11819	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	7.03562363973514	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTTGTTGTTGTTGTTA	NA	False	NA	-1	True	AATAAA	-19	NA	109597314	109533799	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_109534029_109559035_109559130_109562744_109562836_109565250_109565333_109597040
H1_mix_00079940	chr7	-	1210	3	NNC	ENSG00000234273.1	novel	388	4	NA	NA	-106	-42850	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	10.5	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATTGCAGACAATGGTT	NA	False	NA	NA	False	AATAAA	-14	NA	109597272	109564830	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_109565333_109595209_109595686_109597040
H1_mix_00079943	chr7	-	8321	52	FSM	ENSG00000128512.24	ENST00000437633.6	8326	52	5	0	0	0	multi-exon	TRUE	canonical	3	25	junction_43	9.3710311347806	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTGTCTTTACTCCTA	4	True	NA	-13	True	AATAAA	-20	NA	112206394	111726109	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_111728721_111732225_111732288_111735053_111735168_111736916_111736990_111739133_111739244_111739395_111739478_111741093_111741215_111741539_111741662_111742012_111742133_111746333_111746418_111747266_111747444_111755514_111755602_111758623_111758791_111760180_111760323_111765117_111765223_111767031_111767119_111769528_111769678_111778275_111778370_111782863_111782925_111783856_111783953_111788661_111788748_111790456_111790606_111808820_111808880_111809300_111809402_111811873_111811950_111822361_111822457_111834587_111834687_111844762_111844898_111846998_111847127_111863371_111863565_111867983_111868155_111869573_111869656_111871989_111872091_111872268_111872353_111872466_111872565_111877029_111877187_111895611_111895719_111900373_111900537_111901676_111901802_111915778_111915905_111935539_111935629_111940109_111940243_111944810_111944872_111945716_111945799_111977131_111977284_111984305_111984391_111989014_111989164_111994134_111994232_111998447_111998504_112000493_112000535_112004047_112004132_112206101
H1_mix_00079948	chr7	-	1274	4	FSM	ENSG00000146802.13	ENST00000447395.5	1291	4	17	0	-13	0	multi-exon	FALSE	canonical	3	6	junction_3	60.5034434281774	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGTATGCTGTATTTT	-15	True	NA	NA	False	NA	NA	NA	112790406	112767135	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_112767745_112772780_112773056_112775175_112775319_112790159
H1_mix_00079950	chr7	-	1011	3	FSM	ENSG00000214194.9	ENST00000397764.8	1011	3	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_2	54.5	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCGTGTCCATTTCTTA	0	True	NA	0	True	ATTAAA	-27	NA	113118554	113116717	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_113117608_113118067_113118162_113118527
H1_mix_00079951	chr7	-	962	3	FSM	ENSG00000214194.9	ENST00000441359.1	962	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	168.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATTTAATGTTAAAAAAA	-6	True	NA	NA	False	AAAACA	-45	NA	113118560	113116860	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_113117608_113118067_113118162_113118439
H1_mix_00079954	chr7	-	4250	21	FSM	ENSG00000077063.11	ENST00000446636.5	4250	21	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_19	21.5876700919761	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATGTTACTTCTAAAAT	198	False	NA	-93	True	NA	NA	NA	117791780	117710740	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_117711783_117718017_117718120_117719503_117719637_117721066_117721131_117724546_117724733_117725051_117725258_117728088_117728268_117734912_117735101_117735268_117735422_117745830_117745931_117746012_117746100_117756554_117756635_117757874_117757971_117760434_117760711_117767058_117767177_117777510_117777766_117780440_117780592_117782861_117782962_117784250_117784455_117786385_117786426_117791290
H1_mix_00079958	chr7	-	663	3	FSM	ENSG00000231295.1	ENST00000450480.1	547	3	-168	52	-168	-52	multi-exon	FALSE	canonical	2	5	junction_2	0.5	366	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAACAATATATGCTGTTC	NA	False	NA	-70	True	NA	NA	NA	120752682	120746789	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_120746907_120751831_120752019_120752323
H1_mix_00079959	chr7	-	2589	8	FSM	ENSG00000106025.9	ENST00000222747.8	2585	8	0	-4	0	4	multi-exon	FALSE	canonical	3	216	junction_6	16.5788160873189	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTCTGCCTACTTTTTA	-37	True	NA	2	True	AATAAA	-22	NA	120858144	120787315	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_120788898_120806548_120806693_120810462_120810571_120815728_120815804_120838776_120838913_120840026_120840110_120856697_120856834_120857819
H1_mix_00079961	chr7	-	718	3	NNC	ENSG00000106025.9	novel	2585	8	NA	NA	7	-16341	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_1	84.5	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTACATTGTGTGGGAA	-30	True	NA	-7	True	AATAAA	-27	NA	120858137	120855117	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_120855382_120856697_120856834_120857819
H1_mix_00079965	chr7	-	5825	24	FSM	ENSG00000008311.16	ENST00000417368.7	5825	24	0	0	0	0	multi-exon	FALSE	canonical	3	780	junction_18	1678.53954208083	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAATTTGTTTGTTTGCTT	14	True	NA	-18	True	ATTAAA	-8	NA	122144249	122073548	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_122076608_122077837_122078015_122078861_122078951_122079596_122079713_122081499_122081596_122086011_122086180_122091702_122091844_122092842_122092952_122093047_122093159_122098449_122098577_122098744_122098867_122101370_122101439_122101620_122101681_122113117_122113230_122113597_122113721_122115073_122115223_122116632_122116761_122116878_122116958_122118306_122118454_122118562_122118631_122126374_122126460_122129360_122129538_122133516_122133742_122144160
H1_mix_00079967	chr7	-	4235	11	FSM	ENSG00000008311.16	ENST00000679764.1	4213	11	0	-22	0	0	multi-exon	FALSE	canonical	3	324	junction_6	1257.8078907369	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATTAAATTACAAATGCA	5	False	NA	17	True	NA	NA	NA	122098866	122073564	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_122076608_122077837_122078015_122078861_122078951_122079596_122079713_122081499_122081596_122086011_122086116_122091702_122091844_122092842_122092952_122093047_122093159_122098449_122098577_122098744
H1_mix_00079968	chr7	-	4473	10	FSM	ENSG00000008311.16	ENST00000679419.1	4451	10	0	-22	0	0	multi-exon	FALSE	canonical	3	3534	junction_5	410.883871130951	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATTAAATTACAAATGCA	-1	True	NA	17	True	NA	NA	NA	122098872	122073564	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_122076608_122077837_122078015_122078861_122078951_122079596_122079713_122081499_122081596_122086011_122086180_122091702_122091844_122092842_122092952_122093047_122093159_122098449
H1_mix_00079969	chr7	-	5739	23	FSM	ENSG00000008311.16	ENST00000679579.1	5721	23	0	-18	0	0	multi-exon	FALSE	canonical	3	37	junction_11	1778.16628374419	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATTAAATTACAAATGCA	9	True	NA	17	True	NA	NA	NA	122144254	122073564	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_122076608_122077837_122078015_122078861_122078951_122079596_122079713_122081499_122081596_122086011_122086180_122091702_122091844_122092842_122092952_122093047_122093159_122098449_122098577_122098744_122098867_122101620_122101681_122113117_122113230_122113597_122113721_122115073_122115223_122116632_122116761_122116878_122116958_122118306_122118454_122118562_122118631_122126374_122126460_122129360_122129538_122133516_122133735_122144160
H1_mix_00079970	chr7	-	5746	23	FSM	ENSG00000008311.16	ENST00000679847.1	5728	23	0	-18	0	0	multi-exon	FALSE	canonical	3	37	junction_11	1738.32808734606	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATTAAATTACAAATGCA	9	True	NA	17	True	NA	NA	NA	122144254	122073564	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_122076608_122077837_122078015_122078861_122078951_122079596_122079713_122081499_122081596_122086011_122086180_122091702_122091844_122092842_122092952_122093047_122093159_122098449_122098577_122098744_122098867_122101620_122101681_122113117_122113230_122113597_122113721_122115073_122115223_122116632_122116761_122116878_122116958_122118306_122118454_122118562_122118631_122126374_122126460_122129360_122129538_122133516_122133742_122144160
H1_mix_00079971	chr7	-	8554	22	FSM	ENSG00000008311.16	ENST00000681708.1	8554	22	0	0	0	0	multi-exon	FALSE	canonical	3	780	junction_16	1700.03731851796	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATTAAATTACAAATGCA	-1	True	NA	17	True	NA	NA	NA	122144308	122073564	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_122076608_122077837_122078015_122078861_122078951_122079596_122079713_122081499_122081596_122086011_122086180_122091702_122091844_122092842_122092952_122093047_122093159_122098449_122098577_122098744_122101681_122113117_122113230_122113597_122113721_122115073_122115223_122116632_122116761_122116878_122116958_122118306_122118454_122118562_122118631_122126374_122126460_122129360_122129538_122133516_122133742_122144160
H1_mix_00079973	chr7	-	3510	12	FSM	ENSG00000008311.16	ENST00000681318.1	3510	12	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_5	1665.4910972567	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGGTAAATTAAAATTAAAA	5	False	NA	NA	False	AATAAA	-35	NA	122098866	122074494	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_122076608_122077837_122078015_122078861_122078951_122079596_122079713_122081499_122081596_122085577_122085719_122086011_122086180_122091702_122091844_122092842_122092952_122093047_122093159_122098449_122098577_122098744
H1_mix_00079975	chr7	-	4356	9	FSM	ENSG00000008311.16	ENST00000679818.1	4356	9	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_2	1429.71693002496	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTTAGACCTTGACTCAA	9	False	NA	-13	True	NA	NA	NA	122098862	122074895	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_122076608_122077837_122079328_122079596_122079713_122081499_122081596_122086011_122086180_122091702_122091844_122092842_122092952_122093047_122093159_122098449
H1_mix_00079980	chr7	-	1753	12	FSM	ENSG00000008311.16	ENST00000681511.1	1753	12	0	0	0	0	multi-exon	FALSE	canonical	3	904	junction_5	1321.63716404633	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCATGCTATTTGTTAAT	NA	False	NA	-24	True	TATAAA	-18	NA	122098896	122076244	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_122076608_122077837_122078015_122078861_122078951_122079596_122079713_122081499_122081596_122082787_122082892_122086011_122086180_122091702_122091844_122092842_122092952_122093047_122093159_122098449_122098577_122098744
H1_mix_00079981	chr7	-	11030	24	FSM	ENSG00000008311.16	ENST00000358954.6	3126	24	-7904	0	2554	0	multi-exon	FALSE	canonical	3	780	junction_19	1674.57706423006	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAACAGAGAACTTTAATAA	2622	False	NA	28	True	NA	NA	NA	122141685	122076302	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_122076608_122077837_122078015_122078861_122078951_122079596_122079713_122081499_122081596_122082787_122082892_122086011_122086180_122091702_122091844_122092842_122092952_122093047_122093159_122098449_122098577_122098744_122098867_122101370_122101439_122101620_122101681_122113117_122113230_122113597_122113721_122115073_122115223_122116632_122116761_122116878_122116958_122118306_122118454_122118562_122118631_122126374_122126460_122129360_122129538_122133516
H1_mix_00079984	chr7	-	966	1	Intergenic	novelGene_1401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATTTGATAGTTTTGGTT	2622	False	NA	NA	False	AATATA	-44	NA	122141685	122140719	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_-_122140700_122141700
H1_mix_00079985	chr7	-	2538	4	FSM	ENSG00000128610.12	ENST00000442488.7	2435	4	-80	-23	-80	23	multi-exon	FALSE	canonical	2	57	junction_3	13.7194104181711	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCTAAAGATCCCTGACT	6068	False	NA	NA	False	NA	NA	NA	122304830	122301279	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_122302356_122302798_122302932_122303176_122303312_122303636
H1_mix_00079987	chr7	-	6064	28	FSM	ENSG00000081803.17	ENST00000412584.6	4308	28	-435	-1321	-134	0	multi-exon	FALSE	canonical	3	61	junction_12	14.8188883288577	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATCATCTCCAAATAATGC	NA	False	NA	0	True	AATAAA	-20	NA	122886893	122318424	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_122320339_122325476_122325582_122345573_122345682_122360787_122360821_122360929_122361014_122379367_122379443_122386294_122386310_122387025_122387174_122388582_122388739_122393440_122393583_122407539_122407697_122416060_122416165_122438340_122438465_122441511_122441576_122451373_122451476_122471374_122471563_122474380_122474518_122490080_122490282_122491311_122491421_122513248_122513316_122554549_122554690_122581178_122581291_122615180_122615300_122621480_122621718_122629247_122629329_122663236_122663570_122736954_122737069_122885998
H1_mix_00079988	chr7	-	5668	4	FSM	ENSG00000128609.16	ENST00000677264.1	1770	4	0	-3898	0	-15	multi-exon	FALSE	canonical	3	2028	junction_2	117.465834276279	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTATGTAACCAAACTACA	573	False	NA	NA	False	TATAAA	-3	NA	123557679	123537011	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_123542221_123545610_123545677_123550469_123550587_123557403
H1_mix_00079989	chr7	-	5499	5	FSM	ENSG00000128609.16	ENST00000355749.7	5496	5	0	-3	0	3	multi-exon	FALSE	canonical	3	1398	junction_4	332.615017700644	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTGTGTATGTGCGTG	-1	True	NA	NA	False	TATAAA	-21	NA	123557818	123536993	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_123542221_123545610_123545677_123550469_123550587_123557403_123557449_123557774
H1_mix_00079990	chr7	-	1465	4	FSM	ENSG00000128609.16	ENST00000611607.4	1504	4	39	0	-27	0	multi-exon	FALSE	canonical	3	40	junction_3	946.236052297029	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCCTGTCATTCCTAAA	387	False	NA	-17	True	AATAAA	-24	NA	123557865	123541029	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_123542221_123545610_123545677_123550469_123550587_123557774
H1_mix_00079991	chr7	-	1810	7	FSM	ENSG00000128609.16	ENST00000467117.6	1803	7	0	-7	0	0	multi-exon	FALSE	canonical	3	12	junction_2	830.574449803668	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCCTAGCTCCCTGTCA	13	True	NA	-25	True	AATAAA	-16	NA	123557804	123541037	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_123542221_123545610_123545677_123546657_123546818_123550469_123550587_123551367_123551577_123557403_123557449_123557774
H1_mix_00079996	chr7	-	7332	2	FSM	ENSG00000170775.3	ENST00000303921.3	5298	2	-429	-1605	-429	1605	multi-exon	FALSE	canonical	3	150	junction_1	0	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTGTTTGGTAACCAGC	NA	False	NA	13	True	TATAAA	-38	NA	124766221	124742279	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_124747344_124763953
H1_mix_00079997	chr7	-	3924	19	FSM	ENSG00000128513.16	ENST00000357628.8	3924	19	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_18	11.3382342344633	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTTGGTTTATTGTGG	12	True	NA	-4	True	AATAAA	-18	NA	124929825	124822385	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_124824075_124825251_124825358_124827213_124827306_124829253_124829343_124835278_124835415_124840972_124841179_124842806_124842964_124846941_124846999_124851871_124851952_124852971_124853139_124858956_124859113_124863349_124863641_124870910_124871042_124892265_124892381_124897164_124897213_124898260_124898375_124915573_124915647_124928814_124929000_124929793
H1_mix_00079999	chr7	-	3942	18	FSM	ENSG00000128513.16	ENST00000393329.5	3950	18	9	-1	9	0	multi-exon	FALSE	canonical	3	16	junction_12	15.2204106269831	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTTGGTTTATTGTGG	-11	True	NA	-4	True	AATAAA	-18	NA	124929974	124822385	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_124824075_124825251_124825358_124827213_124827306_124829253_124829343_124835278_124835415_124840972_124841179_124842806_124842964_124846941_124846999_124851871_124851952_124852971_124853139_124858956_124859113_124863349_124863641_124892265_124892381_124897164_124897213_124898260_124898375_124915573_124915647_124928814_124929000_124929793
H1_mix_00080000	chr7	-	3035	19	FSM	ENSG00000128513.16	ENST00000664330.1	3035	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	22.9522451092601	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTTTAATATTAGTGAAGA	-21	True	NA	-43	True	TATAAA	-6	NA	124929858	124823296	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_124824075_124825251_124825358_124827213_124827306_124829253_124829343_124835278_124835415_124840972_124841179_124842806_124842964_124846941_124846999_124848539_124848660_124851871_124851952_124852971_124853139_124858956_124859113_124863349_124863641_124892265_124892381_124897164_124897213_124898260_124898375_124915573_124915647_124928814_124929000_124929793
H1_mix_00080001	chr7	-	2897	19	FSM	ENSG00000128513.16	ENST00000668382.1	2877	19	0	-20	0	0	multi-exon	FALSE	canonical	3	18	junction_18	13.9262829938463	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATAATGTTAATGACTT	19	True	NA	-26	True	AATAAA	-10	NA	124929944	124823528	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_124824075_124825251_124825358_124827213_124827306_124829253_124829343_124835278_124835415_124840972_124841179_124842806_124842964_124846941_124846999_124851871_124851952_124852971_124853139_124858956_124859113_124863349_124863641_124870910_124871042_124892265_124892381_124897164_124897213_124898260_124898375_124915573_124915647_124928814_124928997_124929793
H1_mix_00080007	chr7	-	264	1	FSM	ENSG00000279265.1	ENST00000623124.1	461	1	152	45	152	-45	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGCTGGACTGTAGCAC	NA	False	NA	NA	False	NA	NA	NA	127350141	127349877	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_127349900_127350100
H1_mix_00080011	chr7	-	15501	19	FSM	ENSG00000106344.8	ENST00000223073.6	15507	19	6	0	6	0	multi-exon	TRUE	canonical	3	169	junction_10	26.6468097365482	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATAGCAGCATGATTTA	-32	True	NA	NA	False	AATAAA	-18	NA	128343902	128297684	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_128310932_128313174_128313275_128314763_128315021_128317658_128317734_128317956_128318107_128321265_128321425_128323526_128323592_128324558_128324695_128325817_128325892_128330818_128330929_128333289_128333363_128335542_128335680_128335846_128336043_128337130_128337203_128338249_128338343_128338725_128338802_128339226_128339322_128339632_128339792_128343675
H1_mix_00080014	chr7	-	2402	14	NIC	ENSG00000106348.18	novel	2611	17	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	87.4389051291101	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTCTGTATGCCCTGTC	6	True	NA	-2	True	AATAAA	-27	NA	128409980	128392276	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_128393029_128394277_128394362_128394455_128394600_128394888_128395034_128395130_128395275_128396599_128396696_128396931_128397023_128398413_128398614_128400094_128400183_128400332_128400540_128400816_128400892_128401014_128401117_128403705_128403755_128409755
H1_mix_00080015	chr7	-	2503	15	FSM	ENSG00000106348.18	ENST00000348127.10	2479	15	0	-24	0	0	multi-exon	FALSE	canonical	0	0	junction_10	80.5726000421422	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTCTGTATGCCCTGTC	4	True	NA	-2	True	AATAAA	-27	NA	128409982	128392276	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_128393029_128394277_128394362_128394455_128394600_128394888_128395034_128395130_128395275_128396599_128396696_128396931_128397023_128398413_128398614_128400094_128400183_128400332_128400540_128400816_128400892_128401014_128401117_128403705_128403755_128405766_128405866_128409755
H1_mix_00080017	chr7	-	5371	1	FSM	ENSG00000273270.1	ENST00000608477.1	7054	1	-42	1725	-42	-1725	mono-exon	FALSE	NA	NA	NA	NA	NA	328	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGGAGCTCTGTGCA	34	False	NA	NA	False	NA	NA	NA	128531111	128525740	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_128525700_128531100
H1_mix_00080022	chr7	-	3153	21	FSM	ENSG00000135253.16	ENST00000612224.1	2774	21	0	-379	0	379	multi-exon	TRUE	canonical	2	10	junction_7	4.55274642386329	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCCCACCAAGGCTTTG	NA	False	NA	10	True	ATTAAA	-32	NA	128910719	128889567	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_128890514_128890904_128891097_128891184_128891279_128891450_128891534_128891645_128891820_128892513_128892608_128892687_128892795_128892868_128893022_128893237_128893320_128893390_128893477_128893805_128893900_128893975_128894056_128894199_128894294_128902776_128902860_128903726_128903821_128904055_128904139_128906278_128906364_128907100_128907178_128907263_128907454_128908425_128908569_128910600
H1_mix_00080026	chr7	-	5158	7	FSM	ENSG00000186591.13	ENST00000355621.8	5162	7	0	4	0	-4	multi-exon	FALSE	canonical	3	508	junction_3	28.3063597094363	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGGCTGGACCTTGATC	-36	True	NA	-7	True	AATAAA	-17	NA	129952960	129830735	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_129835062_129839206_129839336_129857510_129857564_129858901_129858942_129879567_129879643_129880894_129880972_129952502
H1_mix_00080029	chr7	-	783	4	FSM	ENSG00000186591.13	ENST00000486283.1	788	4	5	0	5	0	multi-exon	FALSE	canonical	3	508	junction_1	16.539514973407	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAATATCCCAGAGAGTT	NA	False	NA	NA	False	AATGAA	-25	NA	129880971	129856972	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_129857564_129858901_129858942_129879567_129879643_129880894
H1_mix_00080030	chr7	-	1894	10	FSM	ENSG00000091732.17	ENST00000358303.9	1889	10	0	-5	0	0	multi-exon	FALSE	canonical	1	253	junction_8	199.077874210069	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTGGAGAACTGTTTTC	4	True	NA	-8	True	AATAAA	-19	NA	130051374	130018286	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_130018733_130022318_130022526_130023510_130023724_130024262_130024507_130026157_130026313_130028901_130029030_130039463_130039548_130040950_130041102_130049032_130049145_130051220
H1_mix_00080032	chr7	-	1741	10	FSM	ENSG00000091732.17	ENST00000481503.5	1741	10	0	0	0	0	multi-exon	FALSE	canonical	1	39	junction_4	306.463700950047	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACAGTGTGTATTAATAA	-11	True	NA	-47	True	NA	NA	NA	130051389	130018325	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_130018733_130022318_130022526_130023510_130023724_130024262_130024378_130026157_130026313_130028901_130029030_130039463_130039548_130040950_130041102_130049032_130049145_130051220
H1_mix_00080037	chr7	-	3329	14	FSM	ENSG00000146842.17	ENST00000473456.5	1961	14	-3	-1365	0	0	multi-exon	FALSE	canonical	3	29	junction_5	84.1547602256643	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATGAAATGTCTTTTTT	12	True	NA	-7	True	ATTAAA	-31	NA	130205406	130164712	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_130166506_130170399_130170474_130173631_130173730_130173824_130173940_130175511_130175610_130181622_130181720_130184183_130184256_130185191_130185368_130192621_130192824_130201849_130202092_130202531_130202664_130203787_130203847_130203973_130204111_130205372
H1_mix_00080040	chr7	-	2417	10	FSM	ENSG00000106477.20	ENST00000675596.1	2589	10	172	0	1	0	multi-exon	FALSE	canonical	3	22	junction_1	21.0631033085738	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTTTGTATGAGAAATAA	76	False	130441077	-74	True	NA	NA	NA	130441065	130397478	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_130399040_130400706_130400822_130401880_130401949_130402647_130402800_130404563_130404709_130411121_130411192_130412178_130412241_130416918_130416967_130427954_130428019_130440933
H1_mix_00080042	chr7	-	3153	3	FSM	ENSG00000106477.20	ENST00000489512.5	3161	3	8	0	-2	0	multi-exon	FALSE	canonical	2	6	junction_1	46.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGAAATGAAGTGTAGACA	-26	True	NA	NA	False	AATAAA	-39	NA	130441048	130419033	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_130422008_130427954_130428019_130440933
H1_mix_00080043	chr7	-	2004	1	FSM	ENSG00000270823.1	ENST00000604666.1	2634	1	85	545	85	-545	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGTATAGTTTGAAAATGT	8138	False	NA	NA	False	AATAAA	-19	NA	130498342	130496338	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_130496300_130498300
H1_mix_00080045	chr7	-	3028	20	FSM	ENSG00000158623.14	ENST00000330992.8	3073	20	0	45	0	-45	multi-exon	FALSE	canonical	3	121	junction_9	22.0378671841832	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGAAAGTTACAGAGTTAC	29	False	NA	NA	False	NA	NA	NA	130668705	130546831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_130547846_130548402_130548543_130549313_130549377_130550523_130550650_130551240_130551345_130552354_130552431_130554480_130554725_130555036_130555133_130561032_130561222_130563268_130563337_130564259_130564394_130610952_130611111_130612151_130612239_130613543_130613637_130616989_130617066_130652868_130652949_130662966_130663039_130666848_130666930_130667481_130667535_130668631
H1_mix_00080047	chr7	-	3731	1	FSM	ENSG00000273489.1	ENST00000610193.1	3731	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGAGTGGCTCCTTATT	3807	False	NA	-4	True	AATAAA	-14	NA	131497694	131493963	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_131494000_131497700
H1_mix_00080048	chr7	-	6170	7	FSM	ENSG00000128567.17	ENST00000446198.5	6170	7	0	0	0	0	multi-exon	FALSE	canonical	3	1843	junction_5	284.249548030521	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTAGTAGTTTCCTCGGA	-3	True	NA	-8	True	ATTAAA	-25	NA	131556563	131500261	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_131504509_131505867_131506036_131506259_131506322_131506578_131506727_131508950_131509586_131510827_131511434_131556259
H1_mix_00080049	chr7	-	5986	9	FSM	ENSG00000128567.17	ENST00000378555.8	5986	9	0	0	0	0	multi-exon	FALSE	canonical	3	629	junction_6	814.95980537386	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTCAAGCTCTAGTAGT	-8	True	NA	-17	True	ATTAAA	-16	NA	131556628	131500270	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_131504509_131505867_131506036_131506259_131506322_131506578_131506727_131508950_131509029_131509364_131509586_131510235_131510332_131510827_131511434_131556259
H1_mix_00080050	chr7	-	2011	8	FSM	ENSG00000128567.17	ENST00000322985.9	2011	8	0	0	0	0	multi-exon	FALSE	canonical	3	1843	junction_6	268.267913603897	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCCTCTTGTAAAATAAC	11	True	NA	-38	True	NA	NA	NA	131556609	131504130	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_131504509_131505867_131506036_131506259_131506322_131506578_131506727_131508950_131509029_131509364_131509586_131510827_131511434_131556259
H1_mix_00080051	chr7	-	325	1	FSM	ENSG00000213261.3	ENST00000445713.1	673	1	357	-9	357	9	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATCCTGGATCATGGCAT	NA	False	NA	NA	False	NA	NA	NA	131662267	131661942	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_131661900_131662300
H1_mix_00080052	chr7	-	13059	32	FSM	ENSG00000221866.10	ENST00000321063.9	12959	32	-94	-6	-94	6	multi-exon	TRUE	canonical	2	6	junction_31	6.1630634165469	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTGGGTGCTTCTTTAT	777	False	NA	-1	True	AATAAA	-33	NA	132576564	132123333	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_132130575_132133048_132133200_132140598_132140812_132145118_132145289_132146509_132146701_132147899_132148000_132148542_132148647_132159472_132159633_132164141_132164289_132165133_132165201_132168303_132168573_132174777_132174921_132179686_132179922_132180585_132180733_132181380_132181621_132182096_132182191_132185298_132185464_132187470_132187608_132194061_132194180_132198484_132198637_132202645_132202837_132203322_132203420_132210942_132211144_132223526_132223642_132226160_132226261_132227450_132227605_132228345_132228470_132241065_132241167_132298090_132298223_132489291_132489475_132507505_132508780_132576421
H1_mix_00080053	chr7	-	1610	8	FSM	ENSG00000106554.13	ENST00000262570.10	1604	8	0	-6	0	6	multi-exon	FALSE	canonical	3	1144	junction_6	49.9371032971906	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTAGCTCCTCACACAT	-5	True	NA	-14	True	AATAAA	-23	NA	133082090	132784863	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_132785661_132796441_132796578_132838398_132838470_132885661_132885746_132975168_132975287_133024545_133024628_133070141_133070230_133081856
H1_mix_00080054	chr7	-	1038	9	FSM	ENSG00000106554.13	ENST00000448878.6	1038	9	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	524.628380379865	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGATTAAAAGAGAAGGGCA	53	False	NA	NA	False	ATTAAA	-34	NA	133082032	132785392	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_132785661_132796441_132796578_132838398_132838470_132885661_132885746_132886973_132886989_132975168_132975287_133024545_133024628_133070141_133070230_133081856
H1_mix_00080055	chr7	-	1367	4	FSM	ENSG00000106554.13	ENST00000481152.2	1367	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	547.872450687404	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTGCTTTGTGTAGCTG	NA	False	NA	NA	False	AATAAA	-19	NA	133070198	132972914	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_132974025_132975168_132975287_133024545_133024628_133070141
H1_mix_00080056	chr7	-	1528	1	FSM	ENSG00000283041.1	ENST00000634247.1	1314	1	-23	-191	-23	191	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTACCATTTATTCTA	NA	False	NA	NA	False	TTTAAA	-38	NA	133035943	133034415	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_133034400_133035900
H1_mix_00080057	chr7	-	304	1	FSM	ENSG00000237821.1	ENST00000421179.1	1099	1	712	83	712	-83	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACCCAGCAAATATGTCAA	797	False	NA	NA	False	NA	NA	NA	133169802	133169498	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_133169500_133169800
H1_mix_00080062	chr7	-	598	2	FSM	ENSG00000085662.14	ENST00000462784.1	598	2	0	0	0	0	multi-exon	FALSE	canonical	3	1737	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATCTGCAAACTGAATCT	-4	True	NA	NA	False	NA	NA	NA	134459134	134451293	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_134451754_134458996
H1_mix_00080063	chr7	-	2576	3	FSM	ENSG00000122783.17	ENST00000459937.5	2576	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	103.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTGACAACAAAATTTTAT	11	True	NA	NA	False	AATAAA	-18	NA	135170695	135092362	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_135094583_135168748_135169061_135170651
H1_mix_00080064	chr7	-	1727	4	FSM	ENSG00000122783.17	ENST00000617987.1	1727	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	124.296241115955	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGTGCTAATGTCTTTC	1945	False	NA	0	True	AATACA	-37	NA	135170524	135165781	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_135166872_135167731_135167808_135168748_135169061_135170275
H1_mix_00080065	chr7	-	7871	4	FSM	ENSG00000122783.17	ENST00000424142.5	1738	4	-46	-6087	0	6084	multi-exon	FALSE	canonical	0	0	junction_2	114.77223822278	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATGAACCCTTTAAAAAT	-1	True	NA	18	True	TTTAAA	-35	NA	135170707	135159697	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_135166872_135167731_135167808_135168748_135169061_135170398
H1_mix_00080066	chr7	-	1497	4	FSM	ENSG00000122783.17	ENST00000393114.8	1494	4	0	-3	0	0	multi-exon	FALSE	canonical	3	92	junction_2	77.761744379154	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGTGCTAATGTCTTTC	-1	True	NA	0	True	AATACA	-37	NA	135170707	135165781	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_135166872_135167731_135167808_135168785_135169061_135170651
H1_mix_00080067	chr7	-	1566	4	NIC	ENSG00000122783.17	novel	1494	4	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	118.923878547956	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTTGTGCTAATGTCT	1727	False	135170775	-3	True	AATACA	-34	NA	135170742	135165784	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_135166872_135167731_135167808_135168748_135169061_135170651
H1_mix_00080071	chr7	-	3507	12	FSM	ENSG00000080802.20	ENST00000451834.5	3507	12	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	41.3988860791573	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGGTTGTCCTTGTTTTT	13	True	NA	0	True	AATAAA	-22	NA	135510080	135361794	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_135363187_135363853_135364067_135393917_135394416_135395633_135395884_135398168_135398227_135410523_135410649_135413487_135413614_135414330_135414433_135415175_135415263_135422155_135422354_135438157_135438424_135509888
H1_mix_00080072	chr7	-	3300	11	FSM	ENSG00000080802.20	ENST00000423368.6	3297	11	0	-3	0	0	multi-exon	FALSE	canonical	3	52	junction_4	36.9730983283792	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGGTTGTCCTTGTTTTT	16	True	NA	0	True	AATAAA	-22	NA	135510077	135361794	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_135363187_135393917_135394416_135395633_135395884_135398168_135398227_135410514_135410649_135413487_135413614_135414330_135414433_135415175_135415263_135422155_135422354_135438157_135438424_135509888
H1_mix_00080074	chr7	-	8171	11	FSM	ENSG00000080802.20	ENST00000428680.6	4642	11	0	-3529	0	1668	multi-exon	FALSE	canonical	3	30	junction_1	37.5207942346641	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGTACCTGGAGTCAACT	17	True	NA	NA	False	NA	NA	NA	135510076	135382621	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_135388895_135393917_135394416_135395633_135395884_135398168_135398227_135410523_135410649_135413487_135413614_135414330_135414433_135415175_135415263_135422155_135422354_135438157_135438424_135509888
H1_mix_00080075	chr7	-	2901	16	FSM	ENSG00000164707.16	ENST00000682651.1	2906	16	5	0	5	0	multi-exon	FALSE	canonical	1	2	junction_4	2.41844761962894	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTATCTAGTCTTTGTAA	5	True	NA	NA	False	AATAAA	-39	NA	135728181	135681230	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_135681701_135684123_135684262_135685521_135685684_135691200_135691326_135691547_135691646_135692322_135692425_135694136_135694239_135695367_135695488_135699363_135699549_135701679_135701761_135702844_135702885_135705595_135705651_135706127_135706301_135708113_135708251_135721394_135721524_135727397
H1_mix_00080078	chr7	-	1542	5	NNC	ENSG00000105894.12	novel	1482	5	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_1	109.49657528891	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTTTTGTGTTCAATAA	-1	True	NA	NA	False	AATAAA	-24	NA	137343796	137227340	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_137228073_137251229_137251392_137253463_137253638_137254858_137254975_137343438
H1_mix_00080079	chr7	-	7442	12	FSM	ENSG00000182158.16	ENST00000330387.11	7441	12	0	-1	0	1	multi-exon	FALSE	canonical	3	64	junction_1	18.351481125624	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGCCCAGTCTTTATAA	12	True	NA	-5	True	AATAAA	-22	NA	138002086	137874977	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_137880552_137882411_137882629_137884994_137885122_137885402_137885503_137901353_137901423_137903958_137904018_137905701_137905849_137908251_137908437_137912990_137913079_137915836_137916013_137928149_137928367_138001603
H1_mix_00080080	chr7	-	1182	4	FSM	ENSG00000182158.16	ENST00000452463.5	1105	4	-51	-26	-12	26	multi-exon	FALSE	canonical	3	117	junction_2	3.74165738677394	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAATTTCAGCTAAGTGT	0	True	NA	26	True	AATAAA	-42	NA	138002098	137912784	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_137913079_137915836_137916013_137928149_137928367_138001603
H1_mix_00080081	chr7	-	623	4	FSM	ENSG00000157703.16	ENST00000478865.5	665	4	44	-2	44	0	multi-exon	FALSE	canonical	2	7	junction_3	3.85861230093008	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGATATTCTCCCATGA	0	True	NA	-6	True	AATAAA	-19	NA	138626050	138594284	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_138594622_138596416_138596531_138621045_138621136_138625968
H1_mix_00080082	chr7	-	12379	20	FSM	ENSG00000122778.10	ENST00000440172.5	12379	20	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	11.1849225779525	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATATTTTCTGTTGATTT	35	True	NA	-4	True	AATAAA	-21	NA	138981318	138831380	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_138838113_138840132_138840279_138844316_138844475_138852222_138852270_138861138_138861457_138867974_138868129_138869537_138869762_138871156_138871363_138879537_138879654_138881387_138881585_138894341_138894527_138898954_138899133_138903587_138903737_138905021_138905082_138906918_138907103_138908990_138909122_138911145_138911324_138912371_138912461_138916747_138919439_138981082
H1_mix_00080083	chr7	-	12647	20	FSM	ENSG00000122778.10	ENST00000422774.2	12498	20	-151	2	-151	-2	multi-exon	FALSE	canonical	3	31	junction_17	9.2849623755721	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGATATTTTCTGTTGAT	76	False	NA	-6	True	AATAAA	-19	NA	138981540	138831382	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_138838161_138840132_138840279_138844316_138844475_138852222_138852270_138861138_138861457_138867974_138868129_138869537_138869762_138871156_138871363_138879537_138879654_138881387_138881585_138894341_138894527_138898954_138899133_138903587_138903737_138905021_138905082_138906918_138907103_138908990_138909122_138911145_138911324_138912371_138912461_138916747_138919439_138981082
H1_mix_00080084	chr7	-	299	3	NNC	ENSG00000146858.8	novel	1766	5	NA	NA	291	-7422	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	4	210	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGATTCTCCCACCTCAG	296	False	NA	NA	False	NA	NA	NA	139035751	139033127	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_139033192_139034542_139034679_139035652
H1_mix_00080088	chr7	-	3182	9	FSM	ENSG00000105939.14	ENST00000471652.1	3182	9	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_5	26.1196166702347	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGGAGTTGGATATTTT	-2	True	NA	-3	True	AGTAAA	-21	NA	139109719	139060337	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_139061139_139064878_139065000_139073855_139074031_139076285_139076410_139078551_139078654_139079469_139080244_139083779_139084033_139089623_139089760_139109023
H1_mix_00080089	chr7	-	535	1	FSM	ENSG00000273391.1	ENST00000608266.1	535	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCTTTCCCTGGTGTTTC	852	False	NA	-21	True	AATAAA	-13	NA	139359566	139359031	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_139359000_139359600
H1_mix_00080091	chr7	-	11206	1	Genic_Genomic	ENSG00000064393.16	novel	NA	NA	NA	NA	144242	4	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGGCATGCTTATTTAT	2033	False	NA	4	True	ATTAAA	-23	NA	139572771	139561565	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr7_-_139561600_139572800
H1_mix_00080095	chr7	-	9434	20	FSM	ENSG00000006459.11	ENST00000397560.7	9220	20	-148	-66	-148	66	multi-exon	FALSE	canonical	3	24	junction_15	3.52827910780934	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCAGCGTCTGCTCCTTA	542	False	NA	-3	True	TTTAAA	-15	NA	140177131	140084679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_140091189_140091803_140092078_140094055_140094139_140096554_140096764_140096898_140097048_140097544_140097643_140098878_140099034_140099898_140100024_140101950_140102161_140111094_140111185_140113490_140113583_140119112_140119220_140120441_140120530_140124620_140124784_140126636_140126824_140127441_140127584_140129492_140129654_140133538_140133657_140139104_140139191_140176743
H1_mix_00080096	chr7	-	3330	16	NNC	ENSG00000157800.18	novel	3330	15	NA	NA	0	1745	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	125.873410836267	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGGAAGGGAAACTGGAA	-5	True	NA	NA	False	NA	NA	NA	140398504	140291947	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_140291975_140333752_140335505_140337283_140337350_140343411_140343564_140345215_140345264_140345868_140345971_140348625_140348768_140351272_140351452_140352061_140352147_140355667_140355765_140358639_140358786_140364407_140364492_140369589_140369683_140380281_140380391_140382437_140382597_140398415
H1_mix_00080097	chr7	-	4367	12	FSM	ENSG00000157800.18	ENST00000340308.7	2955	12	0	-1412	0	1412	multi-exon	FALSE	canonical	3	56	junction_2	130.632915751299	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTCCCGAGGAACCAGAG	42	True	NA	NA	False	NA	NA	NA	140398457	140332339	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_140335505_140337283_140337350_140348625_140348768_140351272_140351452_140352061_140352147_140355667_140355765_140358639_140358786_140364407_140364492_140369589_140369683_140380281_140380391_140382437_140382597_140398415
H1_mix_00080098	chr7	-	4738	15	FSM	ENSG00000157800.18	ENST00000326232.14	3330	15	4	-1412	4	1412	multi-exon	FALSE	canonical	3	344	junction_7	62.5592372337236	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTCCCGAGGAACCAGAG	-27	True	NA	NA	False	NA	NA	NA	140398526	140332339	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_140335505_140337283_140337350_140343411_140343564_140345215_140345264_140345868_140345971_140348625_140348768_140351272_140351452_140352061_140352147_140355667_140355765_140358639_140358786_140364407_140364492_140369589_140369683_140380281_140380391_140382437_140382597_140398415
H1_mix_00080109	chr7	-	3094	8	FSM	ENSG00000133606.11	ENST00000255977.7	3094	8	0	0	0	0	multi-exon	FALSE	canonical	3	576	junction_2	89.7343016797879	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTGTTTTTGAAATGTG	3	True	NA	2	True	AATAAA	-34	NA	140479505	140453032	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_140454730_140455094_140455234_140455789_140455901_140456651_140456867_140459006_140459234_140459706_140459937_140471882_140472012_140479159
H1_mix_00080111	chr7	-	1613	5	FSM	ENSG00000133606.11	ENST00000443720.6	1601	5	0	-12	0	0	multi-exon	FALSE	canonical	3	677	junction_2	60.4291941035126	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGAAATGTCTTCTTTT	9	True	NA	-31	True	AATAAA	-28	NA	140479499	140456179	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_140456867_140459006_140459234_140459706_140459937_140471882_140472012_140479159
H1_mix_00080112	chr7	-	3878	20	NNC	ENSG00000146966.13	novel	3874	20	NA	NA	2	9	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_15	23.8037916856739	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTTATTATGCCAAGGC	0	True	NA	37	True	ATTAAA	-23	NA	140640811	140518410	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_140518739_140519631_140519719_140521854_140522101_140523306_140523425_140525750_140525793_140527317_140527496_140544617_140544767_140546798_140546940_140555635_140555714_140558142_140558213_140559707_140559818_140567085_140567274_140568762_140568814_140569644_140569739_140573807_140574006_140585588_140585711_140587652_140587781_140601402_140602543_140605704_140605807_140640503
H1_mix_00080113	chr7	-	3735	19	FSM	ENSG00000146966.13	ENST00000275884.10	3735	19	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_18	17.6828193104333	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGGTTTTCTGTTTATTA	682	False	NA	28	True	ATTAAA	-14	NA	140640776	140518419	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_140518739_140519631_140519719_140521854_140522101_140523306_140523425_140525750_140525793_140527317_140527496_140544617_140544767_140546798_140546940_140555635_140555714_140558142_140558213_140559707_140559818_140567085_140567274_140568762_140568814_140569644_140569739_140573807_140574009_140585588_140585711_140587652_140587781_140601402_140602543_140640503
H1_mix_00080114	chr7	-	4178	20	FSM	ENSG00000146966.13	ENST00000496613.6	3874	20	37	-341	0	341	multi-exon	FALSE	canonical	3	31	junction_19	18.2551931669409	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGACGTCTCTCTTCCCA	682	False	NA	NA	False	NA	NA	NA	140640776	140518078	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_140518739_140519631_140519719_140521854_140522101_140523306_140523425_140525750_140525793_140527317_140527496_140544617_140544767_140546798_140546940_140555635_140555714_140558142_140558213_140559707_140559818_140567085_140567274_140568762_140568814_140569644_140569739_140573807_140574009_140585588_140585711_140587652_140587781_140601402_140602543_140605704_140605807_140640503
H1_mix_00080118	chr7	-	6458	18	FSM	ENSG00000157764.14	ENST00000646891.1	6458	18	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_10	8.50686675615179	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGGTTGTGGTGGCTCA	2	True	NA	NA	False	AATAAA	-18	NA	140924928	140730664	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_140734771_140739811_140739947_140749286_140749419_140753274_140753394_140754186_140754234_140776911_140777089_140777990_140778076_140781575_140781694_140783020_140783158_140787547_140787585_140794307_140794468_140800361_140800482_140801411_140801561_140807959_140808063_140808891_140808996_140834608_140834873_140850110_140850213_140924565
H1_mix_00080119	chr7	-	1217	10	FSM	ENSG00000157764.14	ENST00000647434.1	1217	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	15.5920207513687	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAATAAATGAACATATG	7966	False	NA	-73	True	NA	NA	NA	140800384	140734557	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_140734771_140739811_140739947_140749286_140749419_140776911_140777089_140777990_140778076_140781575_140781694_140783020_140783158_140787547_140787585_140794307_140794468_140800361
H1_mix_00080121	chr7	-	1193	3	FSM	ENSG00000157764.14	ENST00000469930.2	1180	3	0	-13	0	10	multi-exon	FALSE	canonical	3	61	junction_2	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCATTTTTTTTCTCTGA	-9	True	NA	NA	False	AATAAA	-28	NA	140924742	140833958	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_140834873_140850110_140850213_140924565
H1_mix_00080122	chr7	-	4210	3	FSM	ENSG00000090263.16	ENST00000324787.10	4210	3	0	0	0	0	multi-exon	FALSE	canonical	3	511	junction_2	250	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCTTCACCCCGTCTC	2	True	NA	NA	False	AATAAA	-17	NA	141014952	141002609	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_141006536_141010418_141010661_141014910
H1_mix_00080124	chr7	-	688	3	FSM	ENSG00000090263.16	ENST00000496958.5	688	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	505	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGATGATTTGTTTGGG	525	False	NA	-9	True	AATAAA	-13	NA	141014429	141006167	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_141006536_141010418_141010661_141014351
H1_mix_00080125	chr7	-	466	2	FSM	ENSG00000090263.16	ENST00000484502.1	466	2	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGATGATTTGTTTGGG	13	True	NA	-9	True	AATAAA	-13	NA	141014648	141006167	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_141006536_141014550
H1_mix_00080126	chr7	-	623	3	FSM	ENSG00000090263.16	ENST00000467334.1	622	3	0	-1	0	0	multi-exon	FALSE	canonical	3	131	junction_2	440	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGATGATTTGTTTGGG	-12	True	NA	-9	True	AATAAA	-13	NA	141014966	141006167	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_141006536_141010418_141010618_141014910
H1_mix_00080130	chr7	-	7426	9	NNC	ENSG00000257093.7	novel	7309	9	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	44.2464687856557	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGCGTGCTGCAATCCCTT	13	True	NA	0	True	ATTAAA	-20	NA	141702155	141656727	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_141662980_141664171_141664241_141664903_141665055_141665186_141665319_141666286_141666426_141674066_141674221_141685477_141685637_141686558_141686659_141701885
H1_mix_00080131	chr7	-	7309	9	FSM	ENSG00000257093.7	ENST00000536163.6	7309	9	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	15.7236883395722	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGCGTGCTGCAATCCCTT	2	True	NA	0	True	ATTAAA	-20	NA	141702166	141656727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_141662852_141664171_141664241_141664903_141665055_141665186_141665319_141666286_141666426_141674066_141674221_141685477_141685637_141686558_141686659_141701885
H1_mix_00080133	chr7	-	2652	19	FSM	ENSG00000197993.9	ENST00000355265.7	2494	19	0	-158	0	158	multi-exon	TRUE	canonical	3	41	junction_13	19.9308217171543	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACCCAGTGGACCAAAGAT	-19	True	NA	NA	False	AAGAAA	-41	NA	142962363	142940955	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_142941414_142942433_142942530_142942874_142943045_142943275_142943344_142943485_142943597_142943782_142943884_142944322_142944401_142944642_142944742_142946206_142946318_142952508_142952639_142953807_142953957_142954183_142954373_142954464_142954528_142957826_142957974_142958303_142958429_142960927_142961105_142961359_142961502_142961794_142961873_142962203
H1_mix_00080134	chr7	-	5793	18	NIC	ENSG00000197993.9	novel	2494	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	56	junction_8	16.9285083354579	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGTTCCTGCTATGTT	-19	True	NA	-14	True	AATAAA	-32	NA	142962363	142941113	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_142941414_142942433_142942530_142942874_142943045_142943275_142943344_142943485_142943597_142943782_142943884_142944322_142944401_142944642_142944742_142946206_142946318_142952508_142952639_142953807_142953957_142954183_142954373_142954464_142957974_142958303_142958429_142960927_142961105_142961359_142961502_142961794_142961873_142962203
H1_mix_00080135	chr7	-	1580	10	ISM	ENSG00000197993.9	ENST00000479768.6	1856	11	21	6155	-2	2057	5prime_fragment	FALSE	canonical	3	41	junction_4	19.9319831079921	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGCCCTTTCTTTGTCA	41	False	NA	NA	False	TATAAA	-16	NA	142962303	142952228	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_142952639_142953807_142953957_142954183_142954373_142954464_142954528_142957826_142957974_142958303_142958429_142960927_142961105_142961359_142961502_142961794_142961873_142962203
H1_mix_00080141	chr7	-	655	2	FSM	ENSG00000232533.2	ENST00000429630.2	1186	2	535	-4	-241	4	multi-exon	FALSE	canonical	3	37	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGACTCAGTATTATTATT	2562	False	NA	-4	True	AATAAA	-26	NA	143380495	143379684	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_143380110_143380265
H1_mix_00080142	chr7	-	3310	18	FSM	ENSG00000146904.9	ENST00000275815.4	3310	18	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_12	40.6425893516168	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTGACTACTGAGAATTC	8	True	NA	-8	True	NA	NA	NA	143408856	143391128	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_143391536_143391619_143391776_143393670_143393865_143394193_143394344_143394807_143395015_143395120_143395183_143395318_143395505_143396384_143396511_143397303_143397363_143397560_143397658_143397919_143398071_143398320_143398449_143398600_143398946_143399257_143399414_143399650_143400054_143401323_143401606_143407610_143407679_143408723
H1_mix_00080143	chr7	-	2597	1	FSM	ENSG00000271321.1	ENST00000470691.2	2608	1	-296	307	-296	-307	mono-exon	FALSE	NA	NA	NA	NA	NA	210	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACCCACCGAGGGGTTTA	NA	False	NA	NA	False	NA	NA	NA	143757992	143755395	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_143755400_143758000
H1_mix_00080145	chr7	-	5731	9	FSM	ENSG00000198420.10	ENST00000355951.2	3343	9	-50	-2338	0	17	multi-exon	FALSE	canonical	3	45	junction_8	58.929512979491	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAGATGCAACCCAGCTA	-24	True	NA	NA	False	AATAAA	-34	NA	143902176	143851357	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_143854143_143857073_143857351_143858823_143859162_143860207_143860448_143861094_143861309_143862415_143862514_143862801_143863797_143875988_143876623_143902026
H1_mix_00080156	chr7	-	592	3	FSM	ENSG00000244479.7	ENST00000475089.5	592	3	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	95.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTTCATGTTTATTTCT	NA	False	NA	NA	False	NA	NA	NA	144355703	144311590	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_144311705_144343186_144343299_144355337
H1_mix_00080157	chr7	-	3423	3	NIC	ENSG00000244479.7	novel	773	4	NA	NA	-19	2912	combination_of_known_junctions	FALSE	canonical	3	106	junction_2	31	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTGCTGATAGAAAGTC	NA	False	NA	NA	False	NA	NA	NA	144355170	144333855	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_144336978_144343186_144343299_144354981
H1_mix_00080159	chr7	-	2417	9	FSM	ENSG00000196511.15	ENST00000360057.7	2439	9	18	4	18	-2	multi-exon	FALSE	canonical	1	4	junction_2	2.87228132326901	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATATAGTTTCCTGAAGC	-15	True	NA	NA	False	AATAAA	-18	NA	144836035	144451944	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_144453664_144548490_144548603_144591422_144591570_144623165_144623262_144648806_144648880_144682908_144682979_144765879_144765952_144835559_144835619_144835966
H1_mix_00080162	chr7	-	2232	3	Antisense	novelGene_ENSG00000174469.23_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	27	junction_1	4.5	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGAGTGTCTTCAGTGTGC	NA	False	NA	NA	False	AATAAA	-11	NA	146248908	146214508	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr7_-_146216306_146246566_146246761_146248667
H1_mix_00080164	chr7	-	811	4	Antisense	novelGene_ENSG00000174469.23_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	18.8325958557674	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAGAATCTGCTTTAAGA	NA	False	NA	-14	True	AATAAA	-20	NA	146248930	146215929	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr7_-_146216306_146237454_146237516_146238742_146238854_146248667
H1_mix_00080165	chr7	-	533	2	Antisense	novelGene_ENSG00000174469.23_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	23	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATCTAAGAATCTGCTT	NA	False	NA	-19	True	AATAAA	-15	NA	146248896	146215934	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr7_-_146216239_146248667
H1_mix_00080166	chr7	-	4454	3	Antisense	novelGene_ENSG00000174469.23_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	49	junction_1	5	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGTCTTCTGTAGTGAG	NA	False	NA	0	True	AATAAA	-32	NA	146248935	146233440	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr7_-_146237516_146238742_146238854_146248667
H1_mix_00080168	chr7	-	2602	20	FSM	ENSG00000106462.12	ENST00000460911.5	2591	20	0	-11	0	9	multi-exon	FALSE	canonical	3	258	junction_17	62.2729671500654	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTCTCATAACGTGTCA	0	True	NA	-5	True	AATAAA	-27	NA	148884245	148807373	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_148807707_148809070_148809156_148809309_148809391_148810332_148810415_148811624_148811721_148813958_148814138_148814913_148815040_148815505_148815547_148816683_148816779_148817221_148817392_148817876_148818118_148819595_148819688_148826468_148826633_148827163_148827267_148828739_148828881_148829727_148829849_148832633_148832751_148846469_148846599_148847181_148847306_148884163
H1_mix_00080169	chr7	-	2488	19	FSM	ENSG00000106462.12	ENST00000350995.6	2477	19	0	-11	0	9	multi-exon	FALSE	canonical	3	62	junction_16	92.2845171129233	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTCTCATAACGTGTCA	-3	True	NA	-5	True	AATAAA	-27	NA	148884248	148807373	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_148807707_148809070_148809156_148809309_148809391_148810332_148810415_148811624_148811721_148813958_148814138_148814913_148815040_148815505_148815547_148816683_148816779_148817221_148817392_148817876_148818118_148819595_148819688_148826468_148826633_148827163_148827267_148828739_148828881_148829727_148829849_148846469_148846599_148847181_148847306_148884163
H1_mix_00080170	chr7	-	2780	20	FSM	ENSG00000106462.12	ENST00000320356.7	2654	20	0	-126	0	0	multi-exon	FALSE	canonical	3	21	junction_12	104.954415642606	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTGAATATGTGGAAGACA	9	True	NA	NA	False	NA	NA	NA	148884291	148807256	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_148807707_148809070_148809156_148809309_148809391_148810332_148810415_148811624_148811721_148813958_148814138_148814913_148815040_148815505_148815547_148816683_148816779_148817221_148817392_148817876_148818118_148819595_148819688_148826453_148826633_148827163_148827267_148828739_148828881_148829727_148829849_148832633_148832751_148846469_148846599_148847181_148847306_148884163
H1_mix_00080171	chr7	-	2707	21	FSM	ENSG00000106462.12	ENST00000683744.1	2707	21	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_12	127.803560200802	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTCAACTTTGAATAAA	-14	True	NA	-51	True	NA	NA	NA	148884314	148807419	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_148807707_148809070_148809156_148809309_148809391_148810332_148810415_148811624_148811721_148813958_148814138_148814913_148815040_148815505_148815547_148816683_148816779_148817221_148817392_148817876_148818118_148818977_148819060_148819595_148819688_148826468_148826633_148827163_148827267_148828739_148828881_148829727_148829849_148832633_148832751_148846469_148846599_148847181_148847306_148884163
H1_mix_00080172	chr7	-	2693	9	FSM	ENSG00000106462.12	ENST00000684436.1	2684	9	0	-9	0	0	multi-exon	FALSE	canonical	3	395	junction_7	40.6009544222793	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATAATTTATAGTAATGA	NA	False	NA	NA	False	AAAAAG	-40	NA	148818504	148807524	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_148807707_148809070_148809156_148809309_148809391_148810332_148810415_148811624_148811721_148813958_148814138_148814913_148815040_148815505_148815547_148816683
H1_mix_00080173	chr7	-	2712	20	FSM	ENSG00000106462.12	ENST00000483967.5	2466	20	-141	-105	-107	0	multi-exon	FALSE	canonical	3	76	junction_17	90.8459168560607	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTCAACTTTGAATAAA	NA	False	NA	-51	True	NA	NA	NA	148884428	148807419	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_148807707_148809070_148809156_148809309_148809391_148810332_148810415_148811624_148811721_148813958_148814138_148814913_148815040_148815505_148815547_148816683_148816779_148817221_148817392_148817876_148818118_148819595_148819688_148826468_148826633_148827163_148827267_148828739_148828881_148829727_148829849_148832633_148832751_148846496_148846599_148847181_148847306_148884163
H1_mix_00080174	chr7	-	1732	8	FSM	ENSG00000106462.12	ENST00000682401.1	1732	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	175.545679850817	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATATTCTTTACAAGGC	NA	False	NA	NA	False	ACTAAA	-27	NA	148846551	148818862	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_148819688_148826468_148826633_148827163_148827267_148828739_148828881_148829727_148829849_148832633_148832751_148836821_148837001_148846469
H1_mix_00080176	chr7	-	2386	11	NNC	ENSG00000155660.11	novel	2767	10	NA	NA	0	33306	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1264.21400087169	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGGTGTGCATTTGTAA	27	True	NA	NA	False	AAAAAG	-7	NA	149028468	148969755	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_148969793_149003442_149004210_149005140_149005375_149005896_149006054_149008158_149008311_149011845_149012005_149012154_149012361_149014903_149015043_149018991_149019198_149020966_149021148_149028320
H1_mix_00080177	chr7	-	2767	10	FSM	ENSG00000155660.11	ENST00000652332.1	2767	10	0	0	0	0	multi-exon	FALSE	canonical	3	3415	junction_5	480.421574129315	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTGCGTTAGAAAACATC	-10	True	NA	-17	True	AATAAA	-20	NA	149028505	149003061	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_149004210_149005140_149005375_149005896_149006054_149008158_149008311_149011845_149012005_149012154_149012361_149014903_149015043_149018991_149019198_149020966_149021148_149028320
H1_mix_00080178	chr7	-	2927	10	FSM	ENSG00000155660.11	ENST00000286091.9	2921	10	0	-6	0	0	multi-exon	FALSE	canonical	3	149	junction_3	1287.31846856408	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTGCGTTAGAAAACATC	-2	True	NA	-17	True	AATAAA	-20	NA	149028662	149003061	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_149004210_149005140_149005375_149005896_149006057_149008158_149008311_149011845_149012005_149012154_149012361_149014903_149015043_149018991_149019198_149020966_149021148_149028320
H1_mix_00080179	chr7	-	550	4	FSM	ENSG00000155660.11	ENST00000413966.1	550	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	2216.97336224161	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTGCCAAGATCGATGCA	27	True	NA	NA	False	ATTAAA	-21	NA	149028468	149019120	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_149019198_149020966_149021148_149027848_149027993_149028320
H1_mix_00080180	chr7	-	3209	4	FSM	ENSG00000197362.15	ENST00000491431.2	3209	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	31.5383364600397	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAT	-14	True	NA	NA	False	NA	NA	NA	149090718	149069640	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_149072474_149074385_149074539_149080590_149080718_149090622
H1_mix_00080181	chr7	-	3146	3	FSM	ENSG00000197362.15	ENST00000316286.13	3144	3	0	-2	0	0	multi-exon	FALSE	canonical	3	57	junction_2	25.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	149090782	149069640	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_149072474_149074385_149074539_149090622
H1_mix_00080183	chr7	-	3182	4	FSM	ENSG00000204947.9	ENST00000378061.7	3198	4	20	-4	2	4	multi-exon	FALSE	canonical	3	59	junction_1	14.1656862405839	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCATGTGTTCTTTCCTT	17	True	NA	0	True	AATAAA	-32	NA	149126304	149102779	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_149105567_149112136_149112296_149118221_149118349_149126195
H1_mix_00080186	chr7	-	3244	6	FSM	ENSG00000196453.8	ENST00000247930.5	3172	6	-71	-1	-71	1	multi-exon	FALSE	canonical	3	20	junction_5	23.9633052812003	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGTTTCCTGTTTGCCGTT	NA	False	NA	0	True	AATAGA	-18	NA	149461133	149431361	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_149432933_149436574_149436827_149450998_149451113_149454110_149454238_149455176_149456038_149460814
H1_mix_00080188	chr7	-	3863	7	FSM	ENSG00000181220.18	ENST00000644635.1	3949	7	0	86	0	11	multi-exon	FALSE	canonical	3	88	junction_1	36.9804753289564	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTCCATTCCTAGGCATGT	-26	True	NA	-12	True	AATAAA	-29	NA	149497817	149472781	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_149475481_149476921_149477048_149477563_149477756_149492858_149492973_149493988_149494116_149494203_149494504_149497512
H1_mix_00080190	chr7	-	3811	7	FSM	ENSG00000181220.18	ENST00000685153.1	2425	7	-64	-1322	2	11	multi-exon	FALSE	canonical	3	79	junction_1	42.3979166154816	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTCCATTCCTAGGCATGT	-16	True	NA	-12	True	AATAAA	-29	NA	149497807	149472781	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_149475484_149476921_149477048_149477563_149477756_149492858_149492973_149493988_149494071_149494203_149494504_149497512
H1_mix_00080194	chr7	-	2573	5	FSM	ENSG00000181444.13	ENST00000302017.4	2843	5	274	-4	-95	4	multi-exon	FALSE	canonical	1	1	junction_4	2.29128784747792	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATCCTGGCTCCTGCTTCT	3212	False	NA	NA	False	AATAAA	-28	NA	149773314	149764177	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_149766240_149769089_149769201_149770439_149770557_149770998_149771075_149773107
H1_mix_00080198	chr7	-	685	6	FSM	ENSG00000106538.10	ENST00000223271.8	685	6	0	0	0	0	multi-exon	FALSE	canonical	3	2632	junction_5	159.731023912075	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTCTCAGCTCCTTGT	13	True	NA	-15	True	AATAAA	-13	NA	150341629	150338328	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_150338440_150338614_150338742_150338985_150339082_150340099_150340205_150340435_150340630_150341577
H1_mix_00080199	chr7	-	583	5	FSM	ENSG00000106538.10	ENST00000467793.5	583	5	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	1202.50779623252	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCCAGCTGCCTCTCAG	-20	True	NA	-23	True	AATAAA	-5	NA	150341662	150338336	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_150338440_150338985_150339082_150340099_150340205_150340435_150340630_150341577
H1_mix_00080200	chr7	-	506	1	FSM	ENSG00000213205.3	ENST00000478954.1	1281	1	347	428	347	-428	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTAACAGAAACTGAAAGGT	2581	False	NA	NA	False	NA	NA	NA	150513492	150512986	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_150513000_150513500
H1_mix_00080202	chr7	-	4307	15	FSM	ENSG00000055118.17	ENST00000262186.10	4292	15	0	-15	0	15	multi-exon	FALSE	canonical	3	12	junction_4	8.29463805166707	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGTGTAACTGTTACTTG	-15	True	NA	-15	True	AATAAA	-33	NA	150978321	150944945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_150945515_150946876_150947055_150947327_150947515_150947605_150947879_150948443_150948544_150948855_150949050_150950167_150950421_150950920_150951121_150951447_150951836_150952424_150952854_150957290_150957503_150958058_150958503_150959571_150959737_150974710_150974942_150977837
H1_mix_00080203	chr7	-	3396	9	FSM	ENSG00000055118.17	ENST00000532957.5	3374	9	0	-22	0	22	multi-exon	FALSE	canonical	3	20	junction_8	6.2737050456648	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGTGTTCTGATCTTTG	170	False	NA	NA	False	AGTAAA	-39	NA	150978136	150949392	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_150950421_150950920_150951121_150951447_150951836_150952424_150952854_150957290_150957503_150958058_150958503_150959571_150959737_150974710_150974942_150977837
H1_mix_00080205	chr7	-	1123	12	NNC	ENSG00000164885.13	novel	1122	12	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	50.5493785265604	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTGATGTGGTGGTCA	13	True	NA	-4	True	CATAAA	-19	NA	151057897	151053813	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_151054096_151054211_151054293_151054404_151054465_151055025_151055097_151055276_151055374_151055531_151055607_151055752_151055849_151056579_151056637_151056735_151056797_151056907_151056976_151057071_151057161_151057811
H1_mix_00080206	chr7	-	1123	12	FSM	ENSG00000164885.13	ENST00000485972.6	1122	12	0	-1	0	1	multi-exon	FALSE	canonical	0	0	junction_3	50.5493785265604	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTGATGTGGTGGTCA	13	True	NA	-4	True	CATAAA	-19	NA	151057897	151053813	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_151054096_151054211_151054293_151054404_151054466_151055026_151055097_151055276_151055374_151055531_151055607_151055752_151055849_151056579_151056637_151056735_151056797_151056907_151056976_151057071_151057161_151057811
H1_mix_00080208	chr7	-	1794	10	FSM	ENSG00000164896.21	ENST00000297532.11	1794	10	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_9	49.9164734430193	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGTGAATCTCAGTTTTG	0	True	NA	-38	True	ATTAAA	-16	NA	151080809	151076623	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_151076833_151076912_151077028_151077100_151077237_151077309_151077402_151077620_151077781_151077878_151078093_151078561_151078702_151078841_151079022_151079499_151079923_151080684
H1_mix_00080210	chr7	-	1404	9	FSM	ENSG00000164896.21	ENST00000353841.6	1402	9	0	-2	0	0	multi-exon	FALSE	canonical	3	27	junction_8	146.428310104296	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGTGAATCTCAGTTTTG	1	True	NA	-38	True	ATTAAA	-16	NA	151080842	151076623	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_151076833_151076912_151077028_151077100_151077237_151077309_151077402_151077620_151077781_151077878_151078093_151078561_151078702_151078841_151079022_151080684
H1_mix_00080211	chr7	-	1764	10	FSM	ENSG00000164896.21	ENST00000482571.2	1764	10	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	136.656729539365	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTTGTGAATCTCAGTTT	8639	False	NA	-40	True	ATTAAA	-14	NA	151080862	151076625	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_151076833_151076912_151077028_151077100_151077237_151077309_151077402_151077620_151077781_151077878_151078093_151078561_151078702_151078922_151079022_151079499_151079923_151080684
H1_mix_00080212	chr7	-	1848	9	FSM	ENSG00000164896.21	ENST00000482806.5	1826	9	0	-22	0	0	multi-exon	FALSE	canonical	3	336	junction_8	52.7802046225666	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGTGAATCTCAGTTTTG	19	True	NA	-38	True	ATTAAA	-16	NA	151080790	151076623	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_151076833_151076912_151077028_151077100_151077402_151077620_151077781_151077878_151078093_151078561_151078702_151078841_151079022_151079499_151079923_151080684
H1_mix_00080213	chr7	-	1178	7	FSM	ENSG00000164896.21	ENST00000483953.5	1178	7	0	0	0	0	multi-exon	FALSE	canonical	3	423	junction_6	26.6833281282527	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTTCTCATTAAAGTTC	9881	False	NA	-69	True	NA	NA	NA	151078911	151076654	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_151076833_151076912_151077237_151077309_151077402_151077620_151077781_151077878_151078093_151078561_151078702_151078841
H1_mix_00080214	chr7	-	2506	9	ISM	ENSG00000164896.21	ENST00000297532.11	1794	10	19	31	0	0	intron_retention	FALSE	canonical	3	396	junction_8	35.7611433681867	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTTCTCATTAAAGTTC	19	True	NA	-69	True	NA	NA	NA	151080790	151076654	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_151076833_151076912_151077028_151077100_151077237_151077309_151077402_151077620_151077781_151077878_151078093_151078561_151078702_151078841_151079022_151079499
H1_mix_00080215	chr7	-	2169	2	FSM	ENSG00000164897.14	ENST00000462940.1	1549	2	-620	0	-35	0	multi-exon	FALSE	canonical	3	400	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTGCAGTGTGTCTGAG	-1	True	NA	-8	True	ATTAAA	-18	NA	151083528	151081085	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_151081901_151082174
H1_mix_00080217	chr7	-	4531	15	FSM	ENSG00000033050.9	ENST00000287844.7	4527	15	0	-4	0	4	multi-exon	FALSE	canonical	3	215	junction_14	32.7206013866194	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTGTTTTGGATTGAGA	10	True	NA	2	True	AATACA	-19	NA	151227205	151211479	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_151214192_151214878_151215083_151215603_151215733_151215966_151216030_151218080_151218192_151218560_151218651_151218753_151218874_151219063_151219160_151221577_151221681_151222520_151222617_151223677_151223850_151223931_151224115_151224775_151224989_151226304_151226501_151227162
H1_mix_00080220	chr7	-	249	2	FSM	ENSG00000033050.9	ENST00000477252.1	249	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGTCATCATCATGCCC	6315	False	NA	NA	False	NA	NA	NA	151226958	151226472	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_151226501_151226737
H1_mix_00080222	chr7	-	1732	14	FSM	ENSG00000082014.17	ENST00000392811.6	2018	14	286	0	286	0	multi-exon	FALSE	canonical	3	116	junction_12	22.616692793143	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCCGTGTGGTCATTGGA	-22	True	NA	-2	True	ATTAAA	-17	NA	151277166	151238972	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_151239157_151239395_151239498_151239623_151239747_151240111_151240248_151240424_151240523_151241491_151241654_151241876_151241979_151242136_151242233_151242480_151242604_151242720_151242844_151243658_151243702_151245459_151245672_151275113_151275252_151277076
H1_mix_00080224	chr7	-	2569	7	NNC	ENSG00000187260.16	novel	2038	6	NA	NA	0	415	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_5	34.0379689954224	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCCACCGGGCACCCAAG	710	False	NA	NA	False	NA	NA	NA	151409989	151380705	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_151381747_151381877_151381982_151385087_151385224_151395775_151396197_151400099_151400242_151408891_151409054_151409426
H1_mix_00080225	chr7	-	2041	6	FSM	ENSG00000187260.16	ENST00000334493.11	2038	6	0	-3	0	0	multi-exon	FALSE	canonical	3	51	junction_5	20.5679362114919	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGTGTCCTCTTTTTGT	-5	True	NA	-1	True	AATATA	-21	NA	151410038	151381120	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_151381747_151381877_151381982_151385087_151385224_151395775_151396197_151400099_151400242_151409426
H1_mix_00080226	chr7	-	1905	5	FSM	ENSG00000187260.16	ENST00000628331.1	1905	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	37.9143772202578	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGTGTCCTCTTTTTGT	-5	True	NA	-1	True	AATATA	-21	NA	151410038	151381120	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_151381747_151381877_151381982_151395775_151396197_151400099_151400242_151409426
H1_mix_00080231	chr7	-	2046	8	FSM	ENSG00000106615.10	ENST00000262187.10	2046	8	0	0	0	0	multi-exon	FALSE	canonical	3	1647	junction_6	118.998199266087	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGATTGTTAATGAAAAAT	3	True	NA	-4	True	AATAAA	-19	NA	151519895	151466011	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_151467212_151470570_151470653_151471393_151471442_151471548_151471606_151477332_151477416_151484736_151484805_151490942_151491015_151519459
H1_mix_00080233	chr7	-	561	2	FSM	ENSG00000106615.10	ENST00000482053.1	557	2	0	-4	0	0	multi-exon	FALSE	canonical	3	2044	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAGGTATGTAGCTTTTA	43	False	NA	NA	False	AATAGA	-42	NA	151472067	151471399	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_151471442_151471548
H1_mix_00080236	chr7	-	11534	25	FSM	ENSG00000055609.21	ENST00000679560.1	11523	25	0	-11	0	0	multi-exon	FALSE	canonical	3	8	junction_24	20.3817729029314	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTAGAGCTTCTGTGTT	NA	False	NA	-3	True	AATAAA	-21	NA	152182594	152134921	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_152136925_152138795_152138905_152139185_152139260_152139674_152139792_152144712_152144882_152145164_152145296_152146598_152146736_152148032_152149153_152150899_152151008_152151441_152151582_152152704_152152955_152154009_152154147_152154266_152154446_152155909_152156058_152156204_152156347_152157760_152157926_152158862_152159073_152162116_152163827_152167145_152167379_152169185_152169250_152171263_152171343_152174130_152174243_152176190_152178011_152179833_152180127_152180710
H1_mix_00080237	chr7	-	11546	25	FSM	ENSG00000055609.21	ENST00000680877.1	11540	25	0	-6	0	0	multi-exon	FALSE	canonical	3	8	junction_24	20.6173807475365	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTAGAGCTTCTGTGTT	NA	False	NA	-3	True	AATAAA	-21	NA	152182594	152134921	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_152136925_152138795_152138905_152139185_152139260_152139674_152139792_152144712_152144882_152145152_152145296_152146598_152146736_152148032_152149153_152150899_152151008_152151441_152151582_152152704_152152955_152154009_152154147_152154266_152154446_152155909_152156058_152156204_152156347_152157760_152157926_152158862_152159073_152162116_152163827_152167145_152167379_152169185_152169250_152171263_152171343_152174130_152174243_152176190_152178011_152179833_152180127_152180710
H1_mix_00080241	chr7	-	220	2	FSM	ENSG00000055609.21	ENST00000681755.1	227	2	7	0	7	0	multi-exon	FALSE	canonical	3	8	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCCACACAGAAACTTGAA	NA	False	NA	NA	False	NA	NA	NA	152183156	152182557	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_152182595_152182973
H1_mix_00080243	chr7	-	803	6	FSM	ENSG00000055609.21	ENST00000684623.1	3340	6	2036	501	-1497	-501	multi-exon	FALSE	canonical	3	13	junction_2	1.93907194296653	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATAGTACTGACTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	152224179	152205105	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_152205226_152207299_152207429_152220522_152220736_152222000_152222067_152222572_152222683_152224014
H1_mix_00080251	chr7	-	5155	2	NIC	ENSG00000196584.3	novel	4771	3	NA	NA	-45	421	combination_of_known_splicesites	FALSE	canonical	3	22	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAGACAAGAGGGGGCAG	NA	False	NA	NA	False	NA	NA	NA	152676186	152644354	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_152649364_152676040
H1_mix_00080255	chr7	-	1732	1	FSM	ENSG00000273117.1	ENST00000609974.1	1624	1	-105	-3	-105	3	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTCTGACTCTGTCCC	1347	False	NA	-6	True	AATAAA	-19	NA	155297646	155295914	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_155295900_155297600
H1_mix_00080256	chr7	-	3300	3	NNC	ENSG00000216895.9	novel	597	2	NA	NA	0	-9734	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	11	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGGAATGTTAAATGTCT	-6	True	NA	-6	True	AATAAA	-15	NA	155644406	155620964	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_155623935_155643467_155643605_155644213
H1_mix_00080258	chr7	-	947	4	FSM	ENSG00000182648.14	ENST00000447933.7	957	4	10	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	3.29983164553722	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTTGTTCTATTATTTG	-14	True	NA	2	True	AATAAA	-36	NA	156640567	156472096	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_156472712_156605187_156605381_156605657_156605765_156640535
H1_mix_00080259	chr7	-	2431	1	FSM	ENSG00000182648.14	ENST00000689604.1	2212	1	-22	-197	0	194	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGTGTTAAGTATAGGC	-46	True	NA	NA	False	NA	NA	NA	156640599	156638168	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_156638200_156640600
H1_mix_00080260	chr7	-	6340	19	NIC	ENSG00000105983.23	novel	2922	19	NA	NA	0	442	intron_retention	FALSE	canonical	0	0	junction_1	106.769814132444	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAACTGCTGAAGAACACT	-9	True	NA	NA	False	NA	NA	NA	156893179	156675808	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_156676625_156679076_156679307_156680442_156684164_156688029_156688192_156724111_156724179_156725434_156725526_156725763_156725838_156727929_156728008_156728643_156728721_156734176_156734258_156756392_156756466_156762133_156762199_156763107_156763177_156763668_156763796_156796388_156796493_156826604_156826745_156833752_156833793_156836812_156836886_156892927
H1_mix_00080261	chr7	-	7950	17	FSM	ENSG00000105983.23	ENST00000353442.10	7950	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	74.4691368538	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCACATCCCAATATATG	-13	True	NA	43	True	NA	NA	NA	156893183	156677790	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_156684164_156688029_156688192_156724111_156724179_156725434_156725526_156725763_156725838_156727929_156728008_156728643_156728721_156734176_156734258_156756392_156756466_156762133_156762199_156763107_156763177_156763668_156763796_156796388_156796493_156826604_156826745_156833752_156833793_156836812_156836886_156892927
H1_mix_00080271	chr7	-	4860	23	FSM	ENSG00000155093.19	ENST00000389418.9	4860	23	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_13	6.22992644186706	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGTGGTCTTTATTTGG	7459	False	158587836	1	True	ATTAAA	-15	NA	158587823	157539055	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_157540786_157548945_157549020_157568901_157568967_157571439_157571494_157576612_157576780_157578020_157578141_157595237_157595316_157604001_157604076_157621361_157621510_157656356_157656552_157682724_157682938_157898672_157898738_158081297_158081378_158110828_158110916_158133676_158134060_158136654_158136696_158138293_158138516_158166930_158167292_158192326_158192496_158205170_158205274_158316818_158316933_158489734_158489786_158587557
H1_mix_00080276	chr7	-	3957	29	FSM	ENSG00000146918.20	ENST00000409423.5	3957	29	0	0	0	0	multi-exon	TRUE	canonical	3	77	junction_28	207.350351741556	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCATTTGTTTATTTGAAA	-15	True	NA	-5	True	AATAAA	-12	NA	158704804	158631313	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_158631718_158644288_158644389_158645518_158645620_158646459_158646564_158650831_158650973_158652292_158652481_158654594_158654695_158655117_158655259_158655338_158655456_158656259_158656434_158656551_158656706_158658337_158658409_158662193_158662368_158664183_158664297_158664527_158664751_158671513_158671667_158675476_158675657_158679959_158680086_158680720_158680817_158683299_158683387_158686171_158686242_158687347_158687443_158689818_158689954_158690567_158690723_158692841_158692957_158693308_158693498_158701821_158701939_158703649_158703703_158704723
H1_mix_00080281	chr7	+	3980	1	Intergenic	novelGene_1330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAACGCCTCACAAAACGA	NA	False	NA	NA	False	NA	NA	NA	2721817	2725797	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_2721800_2725800
H1_mix_00080282	chr7	+	2319	1	Intergenic	novelGene_1331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTCTATGGATTTATCTA	NA	False	NA	NA	False	NA	NA	NA	3319878	3322197	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_3319900_3322200
H1_mix_00080283	chr7	+	669	1	Intergenic	novelGene_1332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCGTAGCTGTGACTGCA	NA	False	NA	NA	False	NA	NA	NA	4583325	4583994	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_4583300_4584000
H1_mix_00080284	chr7	+	744	1	Intergenic	novelGene_1334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCGTAGCTGTGACTGCA	NA	False	NA	NA	False	NA	NA	NA	4591754	4592498	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_4591800_4592500
H1_mix_00080285	chr7	+	507	1	Intergenic	novelGene_1336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCGAGGGACCTAGTGG	NA	False	NA	NA	False	NA	NA	NA	6919828	6920335	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_6919800_6920300
H1_mix_00080286	chr7	+	254	1	Intergenic	novelGene_1338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTACCTTTGGAAACTCTG	NA	False	NA	NA	False	NA	NA	NA	6996606	6996860	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_6996600_6996900
H1_mix_00080287	chr7	+	239	1	Intergenic	novelGene_1339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCCAGGAAGGAAAGGAGTT	NA	False	NA	NA	False	NA	NA	NA	9355378	9355617	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_9355400_9355600
H1_mix_00080288	chr7	+	309	1	Intergenic	novelGene_1342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTGGGCAGTCTTTCAG	NA	False	NA	NA	False	NA	NA	NA	14143337	14143646	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_14143300_14143600
H1_mix_00080289	chr7	+	358	1	Intergenic	novelGene_1344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATCTTTCATAAATTATG	NA	False	NA	NA	False	NA	NA	NA	21691167	21691525	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_21691200_21691500
H1_mix_00080290	chr7	+	358	1	Intergenic	novelGene_1351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAGGCCAGGCACAGT	NA	False	NA	NA	False	NA	NA	NA	24841358	24841716	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_24841400_24841700
H1_mix_00080294	chr7	+	248	1	Intergenic	novelGene_1355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCCTCTGAGCCCAAGCC	NA	False	NA	NA	False	AATAAA	-16	NA	29791882	29792130	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_29791900_29792100
H1_mix_00080296	chr7	+	1671	1	Antisense	novelGene_ENSG00000289089.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGAGGCCGGGTGTGGTGG	NA	False	NA	NA	False	AGTAAA	-25	NA	35197537	35199208	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr7_+_35197500_35199200
H1_mix_00080297	chr7	+	1489	1	Intergenic	novelGene_1357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTGCGTCCATGTGTTC	9507	False	NA	NA	False	NA	NA	NA	36252829	36254318	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_36252800_36254300
H1_mix_00080298	chr7	+	276	1	Intergenic	novelGene_1358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGTCCTAACGACACAAA	NA	False	NA	NA	False	NA	NA	NA	39520167	39520443	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_39520200_39520400
H1_mix_00080299	chr7	+	1327	1	Intergenic	novelGene_1362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	227	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAAAAGGTGGCTGGAG	NA	False	NA	NA	False	NA	NA	NA	51870516	51871843	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_51870500_51871800
H1_mix_00080300	chr7	+	4604	1	Intergenic	novelGene_1364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGAAGAGGGTATCCCTTC	NA	False	NA	NA	False	NA	NA	NA	55453564	55458168	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_55453600_55458200
H1_mix_00080301	chr7	+	500	1	Intergenic	novelGene_1367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGCCATAATGTTTAACC	NA	False	NA	NA	False	ATTAAA	-36	NA	66156322	66156822	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_66156300_66156800
H1_mix_00080303	chr7	+	301	1	Intergenic	novelGene_1371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGCAAACTGTAACAAGA	NA	False	NA	NA	False	NA	NA	NA	74286532	74286833	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_74286500_74286800
H1_mix_00080304	chr7	+	822	1	Intergenic	novelGene_1374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGCTAATTAAAAAAAAATT	5926	False	NA	NA	False	NA	NA	NA	77613228	77614050	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_77613200_77614000
H1_mix_00080305	chr7	+	279	1	Intergenic	novelGene_1375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	190	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGAGAGAGAGAGAGAGAA	NA	False	NA	NA	False	NA	NA	NA	82001763	82002042	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_82001800_82002000
H1_mix_00080306	chr7	+	1276	1	Intergenic	novelGene_1377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATGTACCAAAACTTTCAT	NA	False	NA	NA	False	ATTAAA	-25	NA	91867804	91869080	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_91867800_91869100
H1_mix_00080307	chr7	+	644	1	Intergenic	novelGene_1378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	230	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTAGTATCACTGAGATC	NA	False	NA	NA	False	AGTAAA	-19	NA	92713044	92713688	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_92713000_92713700
H1_mix_00080308	chr7	+	258	1	Intergenic	novelGene_1380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTCAGAATTCAGGTCT	NA	False	NA	NA	False	AAAAAG	-25	NA	93398262	93398520	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_93398300_93398500
H1_mix_00080310	chr7	+	204	1	Intergenic	novelGene_1390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAATACAAGGAAAAA	NA	False	NA	NA	False	AATAAA	-33	NA	104671382	104671586	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_104671400_104671600
H1_mix_00080312	chr7	+	231	1	Intergenic	novelGene_1395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCCCAATGCTTCCTCAG	984	False	NA	NA	False	NA	NA	NA	116456949	116457180	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_116456900_116457200
H1_mix_00080313	chr7	+	313	1	Intergenic	novelGene_1397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	225	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCAGAAATCTATCTGACC	1747	False	NA	NA	False	NA	NA	NA	121317533	121317846	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_121317500_121317800
H1_mix_00080314	chr7	+	242	1	Intergenic	novelGene_1398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATAATTCTCATAAAAACAC	2958	False	NA	NA	False	NA	NA	NA	121318744	121318986	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_121318700_121319000
H1_mix_00080322	chr7	+	1705	1	Intergenic	novelGene_1409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGGAATATCATTTACAGA	NA	False	NA	NA	False	AAAAAG	-21	NA	139021497	139023202	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_139021500_139023200
H1_mix_00080323	chr7	+	460	1	Intergenic	novelGene_1412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGACGTGGCTTAGGAGGA	NA	False	NA	NA	False	NA	NA	NA	143540152	143540612	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_143540200_143540600
H1_mix_00080329	chr7	+	585	5	FSM	ENSG00000164818.16	ENST00000437419.5	585	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	161.778204650688	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGAGCTCGTCGGGACGT	-31	True	NA	NA	False	NA	NA	NA	727218	756792	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_727316_740818_740944_741346_741466_754588_754822_756781
H1_mix_00080331	chr7	+	570	5	FSM	ENSG00000164828.18	ENST00000450538.5	570	5	0	0	0	0	multi-exon	FALSE	canonical	2	50	junction_4	161.097020456618	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGATAAGCTTTCACCTT	-16	True	NA	NA	False	NA	NA	NA	816614	843006	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_816674_832504_832602_838797_838987_841945_842131_842966
H1_mix_00080332	chr7	+	1228	10	NIC	ENSG00000164828.18	novel	4488	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	101	junction_8	136.431324016296	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGCTATTTTGGGTTTCT	-16	True	NA	NA	False	NA	NA	NA	816614	851481	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_816674_832504_832602_838797_838987_841945_842131_843205_843233_843340_843521_848417_848616_849519_849604_849922_850034_851383
H1_mix_00080333	chr7	+	3806	18	NIC	ENSG00000164828.18	novel	3812	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	123	junction_7	119.985350893623	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATGGGATATAAACAGT	-16	True	NA	9	True	AATAAA	-19	NA	816614	874899	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_816674_838797_838987_841945_842131_843205_843233_843340_843521_851949_852044_852608_852668_852812_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
H1_mix_00080335	chr7	+	4062	20	FSM	ENSG00000164828.18	ENST00000405266.5	4062	20	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	124.020505855186	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCATGGGATATAAACAGTC	11	True	NA	10	True	AATAAA	-20	NA	832500	874900	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_832602_838797_838987_841945_842131_843205_843233_843340_843521_849922_850034_851383_851483_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
H1_mix_00080336	chr7	+	4484	21	FSM	ENSG00000164828.18	ENST00000413171.6	4488	21	4	0	0	0	multi-exon	FALSE	canonical	3	101	junction_7	121.653719630762	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGGGATATAAACAGTCTA	15	True	NA	12	True	AATAAA	-22	NA	832504	874902	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_832602_838797_838987_841945_842131_843205_843233_843340_843521_848417_848616_849519_849604_849922_850034_851383_851483_851949_852044_852608_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
H1_mix_00080344	chr7	+	4038	10	FSM	ENSG00000164828.18	ENST00000475971.5	4038	10	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_1	41.5237549147741	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGGGATATAAACAGTCTA	2789	False	NA	12	True	AATAAA	-22	NA	852246	874902	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
H1_mix_00080345	chr7	+	873	5	FSM	ENSG00000239857.7	ENST00000412734.6	873	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	282.584832395513	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGGTGTCTGTGGCTCTTC	728	False	NA	NA	False	NA	NA	NA	877904	891066	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_878328_886055_886135_886568_886651_887369_887520_890927
H1_mix_00080347	chr7	+	1866	2	FSM	ENSG00000164849.10	ENST00000444847.2	1883	2	17	0	17	0	multi-exon	FALSE	canonical	2	4	junction_1	0	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAGGATTTCTGACTGAA	10	False	NA	8	True	AATAAA	-14	NA	1044562	1059261	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_1044659_1057491
H1_mix_00080348	chr7	+	867	5	NIC	ENSG00000229043.3	novel	1939	4	NA	NA	6	-226	combination_of_known_splicesites	FALSE	canonical	3	10	junction_3	11.4564392373896	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTTATGTTTATCTCAATT	-21	True	NA	NA	False	NA	NA	NA	1160437	1164349	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_1160624_1162351_1162544_1162961_1163218_1163451_1163496_1164160
H1_mix_00080349	chr7	+	577	5	ISM	ENSG00000230487.9	ENST00000685139.1	2811	6	26	3322	0	-1187	5prime_fragment	FALSE	canonical	1	3	junction_4	4.60298815988049	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAAACCCGATGCCGTCG	-1	True	NA	NA	False	NA	NA	NA	1570141	1583231	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_1570280_1574714_1574864_1575786_1575889_1579286_1579405_1583161
H1_mix_00080350	chr7	+	785	5	NIC	ENSG00000106268.16	novel	771	4	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	56	junction_2	427.046250422598	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	1	True	NA	19	True	AATAAA	-15	NA	2242222	2251145	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_2242257_2242924_2243049_2244562_2244727_2249856_2250003_2250828
H1_mix_00080351	chr7	+	1383	4	FSM	ENSG00000106268.16	ENST00000339737.6	698	4	-685	0	-6	0	multi-exon	FALSE	canonical	3	214	junction_1	342.0061727838	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	-2	True	NA	19	True	AATAAA	-15	NA	2242219	2251145	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_2242976_2244562_2244727_2249856_2250003_2250828
H1_mix_00080353	chr7	+	3504	20	NNC	ENSG00000106263.19	novel	3096	19	NA	NA	0	0	intron_retention	FALSE	canonical	1	1	junction_1	631.156766790888	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCGGTCTTTCTCCTC	-11	True	NA	41	True	AATAAA	-15	NA	2354085	2380740	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_2354196_2354523_2355421_2360709_2360903_2362644_2362765_2363069_2363128_2363631_2363761_2364371_2364530_2366316_2366449_2366524_2366592_2366998_2367046_2369471_2369683_2371776_2371850_2372672_2372796_2374527_2374607_2375388_2375528_2376949_2377076_2378688_2378767_2379133_2379243_2379393_2379512_2380203
H1_mix_00080354	chr7	+	2971	19	NNC	ENSG00000106263.19	novel	3096	19	NA	NA	3	-2	intron_retention	FALSE	canonical	1	377	junction_18	546.942029225523	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCGGTCTTTCTCCTCTCT	7	True	NA	44	True	AATAAA	-18	NA	2354869	2380743	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_2355421_2360709_2360903_2362644_2362765_2363069_2363128_2363631_2363761_2364371_2364530_2366316_2366449_2366524_2366592_2366998_2367046_2369471_2369683_2371776_2371850_2372672_2372796_2374527_2374607_2375388_2375528_2376949_2377076_2378688_2378767_2379133_2379243_2379393_2379512_2380283
H1_mix_00080355	chr7	+	2811	20	NNC	ENSG00000106263.19	novel	2966	19	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	188	junction_1	600.490136831683	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAACCGGTCTTTCTCCT	18	True	NA	40	True	AATAAA	-14	NA	2354880	2380739	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_2355084_2355233_2355421_2360709_2360903_2362644_2362765_2363069_2363128_2363631_2363761_2364371_2364530_2366316_2366449_2366524_2366592_2366998_2367046_2369471_2369683_2371776_2371850_2372672_2372796_2374527_2374607_2375388_2375528_2376949_2377076_2378688_2378767_2379133_2379243_2379393_2379512_2380278
H1_mix_00080356	chr7	+	2890	20	NNC	ENSG00000106263.19	novel	3096	19	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	1	188	junction_1	601.260481160192	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCGGTCTTTCTCCTCTCTT	19	True	NA	45	True	AATAAA	-19	NA	2354881	2380744	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_2355084_2355233_2355421_2360709_2360903_2362644_2362765_2363069_2363128_2363631_2363761_2364371_2364530_2366316_2366449_2366524_2366592_2366998_2367046_2369471_2369683_2371776_2371850_2372672_2372796_2374527_2374607_2375388_2375528_2376949_2377076_2378688_2378767_2379133_2379243_2379393_2379512_2380203
H1_mix_00080360	chr7	+	2766	2	FSM	ENSG00000106263.19	ENST00000465670.1	2766	2	0	0	0	0	multi-exon	FALSE	canonical	3	2232	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCGGTCTTTCTCCTC	5266	False	NA	41	True	AATAAA	-15	NA	2377823	2380740	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_2379243_2379393
H1_mix_00080361	chr7	+	1949	8	FSM	ENSG00000106003.14	ENST00000338732.7	1968	8	19	0	19	0	multi-exon	FALSE	canonical	1	1	junction_1	16.3170125316856	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCCTGGGGGTCCTGGTCT	718	False	NA	32	True	AATAAA	-16	NA	2518572	2528427	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_2518599_2524694_2524744_2525218_2525319_2525413_2525568_2525684_2525771_2526243_2526410_2526835_2526922_2527145
H1_mix_00080363	chr7	+	488	3	FSM	ENSG00000174945.14	ENST00000480560.5	583	3	95	0	41	0	multi-exon	FALSE	canonical	2	2	junction_1	0.5	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGAAGTCGGGGCCCAGCG	187	False	NA	NA	False	NA	NA	NA	2702570	2709114	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_2702890_2708587_2708717_2709074
H1_mix_00080364	chr7	+	874	1	FSM	ENSG00000224593.1	ENST00000430569.1	476	1	35	-433	35	433	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATCCAAAACTGTGTTGT	NA	False	NA	NA	False	ATTAAA	-29	NA	3338160	3339034	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_3338200_3339000
H1_mix_00080365	chr7	+	930	7	FSM	ENSG00000242802.9	ENST00000647628.1	1027	7	0	97	0	-97	multi-exon	FALSE	canonical	3	113	junction_6	17.4872969768216	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGTGTGCAGGGTGAGGT	7807	False	NA	NA	False	NA	NA	NA	4783458	4786556	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_4783461_4783688_4783799_4784202_4784372_4784907_4785049_4785414_4785453_4785521_4785685_4786249
H1_mix_00080367	chr7	+	3632	2	FSM	ENSG00000196204.12	ENST00000471244.1	3632	2	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTAGTCTGTGTCATCAA	NA	False	NA	18	True	ATTAAA	-18	NA	4993508	4998167	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_4995583_4996609
H1_mix_00080369	chr7	+	3555	4	NIC	ENSG00000157954.15	novel	1504	10	NA	NA	-1461	0	intron_retention	FALSE	canonical	3	182	junction_3	97.5807358037436	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGTGCGTAAGGAAACCGT	NA	False	NA	NA	False	NA	NA	NA	5224488	5231327	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_5227345_5228103_5228212_5229607_5229706_5230834
H1_mix_00080370	chr7	+	2861	11	NIC	ENSG00000164638.11	novel	2734	11	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_4	23.4520787991171	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCCGCCTGCAAGCAGAGT	NA	False	NA	28	True	ATTAAA	-22	NA	5282906	5304060	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_5283083_5287808_5287986_5290731_5290864_5291123_5291238_5291729_5291822_5294859_5294935_5296935_5297199_5298987_5299127_5299239_5299428_5300421_5300663_5302796
H1_mix_00080371	chr7	+	942	1	FSM	ENSG00000273084.1	ENST00000608012.1	942	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTCTGAGCACAGGCTTT	545	False	NA	NA	False	NA	NA	NA	5428730	5429672	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_5428700_5429700
H1_mix_00080372	chr7	+	509	1	FSM	ENSG00000272719.1	ENST00000609813.1	515	1	-125	131	-125	-131	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGGGGCAGGTATTTATG	NA	False	NA	NA	False	NA	NA	NA	5556605	5557114	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_5556600_5557100
H1_mix_00080374	chr7	+	747	4	FSM	ENSG00000075618.18	ENST00000447103.5	713	4	60	-94	60	42	multi-exon	TRUE	canonical	0	0	junction_1	583.712828937883	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGGCAGCTGCTGGGCA	108	False	NA	NA	False	NA	NA	NA	5594606	5604040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_5594897_5603256_5603414_5603495_5603618_5603862
H1_mix_00080375	chr7	+	2201	14	FSM	ENSG00000122674.12	ENST00000628813.2	2218	14	-19	36	0	-36	multi-exon	FALSE	canonical	2	31	junction_2	546.931104560798	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTCTTCCTCTCTCAAGA	3	True	NA	NA	False	NA	NA	NA	5898780	5926514	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_5898920_5900283_5900382_5900854_5900933_5901656_5901705_5902660_5902745_5905093_5905270_5910034_5910117_5911860_5911923_5912842_5912955_5918866_5918901_5919848_5919967_5923386_5923546_5923834_5923963_5925631
H1_mix_00080376	chr7	+	1107	5	FSM	ENSG00000106305.10	ENST00000400479.6	1107	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	317.915377891665	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTAACTGATTTTAAAGGG	-26	True	NA	NA	False	NA	NA	NA	6009254	6023695	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_6009379_6014901_6015053_6015145_6015353_6017813_6018046_6023302
H1_mix_00080377	chr7	+	2552	7	FSM	ENSG00000136238.18	ENST00000356142.4	907	7	-184	-1461	-172	14	multi-exon	FALSE	canonical	3	9	junction_3	1310.84675771893	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTTTTGAGACTTGATG	NA	False	NA	28	True	AATAAA	-28	NA	6374354	6403981	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_6374771_6387211_6387284_6391923_6392042_6398661_6398719_6400125_6400189_6401867_6402028_6402315
H1_mix_00080379	chr7	+	739	6	ISM	ENSG00000136247.15	ENST00000335965.11	1706	8	-36	5943	-16	0	5prime_fragment	FALSE	canonical	3	149	junction_1	86.5623474727898	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGTGGCTCTCGTGAC	-35	True	NA	NA	False	NA	NA	NA	6577417	6583431	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_6577499_6578565_6578721_6580554_6580679_6581606_6581681_6582072_6582252_6583305
H1_mix_00080385	chr7	+	542	2	FSM	ENSG00000146576.13	ENST00000477298.1	542	2	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGTGGAGCATCAGAAAAC	9613	False	NA	NA	False	NA	NA	NA	6599973	6602259	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_6600357_6602100
H1_mix_00080386	chr7	+	561	2	FSM	ENSG00000187953.10	ENST00000348899.7	569	2	8	0	8	0	multi-exon	FALSE	canonical	3	9	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATTGCAGGTGAGTTTT	16	True	NA	NA	False	NA	NA	NA	6729788	6731944	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_6730302_6731896
H1_mix_00080387	chr7	+	4701	9	NIC	ENSG00000187953.10	novel	3327	14	NA	NA	8	1	intron_retention	TRUE	canonical	3	9	junction_1	38.8973006775534	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTTATGGTAATTTGTT	16	True	NA	NA	False	AATAAA	-21	NA	6729788	6753863	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_6730302_6731896_6731956_6733398_6733528_6735304_6735390_6737075_6737937_6741684_6741853_6746087_6746189_6747035_6747206_6751248
H1_mix_00080389	chr7	+	856	2	NIC	ENSG00000164654.16	novel	536	3	NA	NA	5	-7	intron_retention	FALSE	canonical	3	53	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAAATGTGTTGCCTGGT	12	True	NA	4	True	AATAAA	-16	NA	7567057	7572660	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_7567689_7572435
H1_mix_00080391	chr7	+	4895	12	NIC	ENSG00000164654.16	novel	3232	8	NA	NA	-75	212	combination_of_known_splicesites	FALSE	canonical	2	11	junction_1	99.3052727204485	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGAAATTATGATTCCTT	311	False	NA	41	True	AATAAA	-26	NA	7567407	7609144	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_7567485_7568025_7568124_7572435_7573770_7574097_7574197_7583117_7583373_7585635_7585806_7588497_7588564_7589404_7589564_7594979_7595133_7596256_7596462_7605941_7606072_7606995
H1_mix_00080392	chr7	+	2871	2	FSM	ENSG00000164654.16	ENST00000479694.1	2888	2	17	0	17	0	multi-exon	FALSE	canonical	3	327	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATGCAGTTTATGTCTC	NA	False	NA	NA	False	NA	NA	NA	7605134	7608929	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_7606072_7606995
H1_mix_00080393	chr7	+	4820	3	ISM	ENSG00000106415.13	ENST00000223145.10	4741	8	100525	0	-754	0	3prime_fragment	FALSE	canonical	3	132	junction_2	10.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTCACACATGTTTTTGG	5683	False	NA	14	True	AATAAA	-20	NA	8069320	8089080	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_8071132_8084896_8085018_8086192
H1_mix_00080394	chr7	+	427	2	FSM	ENSG00000106415.13	ENST00000491947.1	427	2	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGTTAATTTCATCCCAA	NA	False	NA	NA	False	NA	NA	NA	8084638	8086240	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_8085018_8086192
H1_mix_00080395	chr7	+	2046	1	FSM	ENSG00000229091.3	ENST00000419827.2	1942	1	148	-252	148	252	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTAAAAATGATTTCATTC	225	False	NA	NA	False	AATAAA	-33	NA	10451458	10453504	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_10451500_10453500
H1_mix_00080396	chr7	+	366	1	FSM	ENSG00000229091.3	ENST00000419827.2	1942	1	1828	-252	1828	252	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTAAAAATGATTTCATTC	1905	False	NA	NA	False	AATAAA	-33	NA	10453138	10453504	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_10453100_10453500
H1_mix_00080397	chr7	+	3215	18	NNC	ENSG00000106443.17	novel	3427	18	NA	NA	290	-25997	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_17	46.7246221110314	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTGCTTGCATATTGGTG	256	False	NA	NA	False	AATAAA	-43	NA	10974196	11143621	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_10974325_10974834_10974946_10982371_10983160_10990702_10990848_11013746_11013907_11022867_11022980_11028680_11028819_11035639_11035787_11036417_11036689_11036984_11037092_11038759_11038856_11040671_11040776_11042682_11042815_11051611_11051781_11061790_11061842_11061963_11062086_11111349_11111468_11143305
H1_mix_00080400	chr7	+	1114	1	FSM	ENSG00000236048.2	ENST00000420252.1	1194	1	-3	83	-3	-83	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGAAAATGGTTCAACTG	119	False	NA	NA	False	AAGAAA	-27	NA	12471348	12472462	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_12471300_12472500
H1_mix_00080401	chr7	+	1798	12	FSM	ENSG00000136261.16	ENST00000436868.5	1784	12	-14	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	161.501528790451	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAATCTGGGCTTATA	-8	True	NA	9	True	AATAAA	-7	NA	16646159	16706509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_16646289_16665436_16665502_16674411_16674589_16681300_16681405_16682779_16682846_16685923_16686041_16689796_16689907_16694833_16695005_16696914_16697062_16698047_16698187_16704546_16704670_16706059
H1_mix_00080402	chr7	+	1689	11	FSM	ENSG00000136261.16	ENST00000405202.5	1689	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	167.06708233521	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAACCAGTTTTTTAAAATA	27	True	NA	-19	True	NA	NA	NA	16646194	16706481	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_16646289_16674411_16674589_16681300_16681405_16682779_16682846_16685904_16686041_16689796_16689907_16694833_16695005_16696914_16697062_16698047_16698187_16704546_16704670_16706059
H1_mix_00080403	chr7	+	2420	1	FSM	ENSG00000279048.1	ENST00000625121.1	2420	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCCTTGGTGTTGAAAG	711	False	NA	NA	False	ATTAAA	-14	NA	17940502	17942922	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_17940500_17942900
H1_mix_00080404	chr7	+	4255	12	NIC	ENSG00000048052.24	novel	4239	12	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_6	19.958220825324	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATCCCCTTTCATACA	-17	True	NA	10	True	AATAAA	-10	NA	18495732	18668837	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_18495855_18496261_18496325_18585280_18585523_18590335_18590487_18591515_18591643_18593907_18594030_18629349_18629482_18634626_18634743_18644670_18644794_18647784_18647999_18648465_18648684_18666212
H1_mix_00080405	chr7	+	2169	3	NNC	ENSG00000267055.1	novel	670	5	NA	NA	24973	5427	intron_retention	FALSE	canonical	3	8	junction_2	3	25	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTAAGGTGCTTAGTGT	NA	False	NA	-5	True	AATAAA	-8	NA	20121109	20135902	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_20121314_20128968_20130514_20135482
H1_mix_00080406	chr7	+	272	1	ISM	ENSG00000105855.10	ENST00000222573.5	8974	14	80096	4487	46351	937	mono-exon	FALSE	NA	NA	NA	NA	NA	185	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGCCTCCTGAGTAGCT	101	False	NA	NA	False	NA	NA	NA	20410995	20411267	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_20411000_20411300
H1_mix_00080407	chr7	+	5105	5	FSM	ENSG00000105866.15	ENST00000448246.1	4293	5	-477	-335	-476	67	multi-exon	FALSE	canonical	0	0	junction_2	43.3935479074943	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGTATTGAGATCTGGTCA	23	False	NA	74	True	NA	NA	NA	21427566	21514889	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_21428259_21428676_21428793_21477078_21477308_21481923_21482124_21511021
H1_mix_00080410	chr7	+	1746	3	FSM	ENSG00000228649.10	ENST00000667557.1	1743	3	-3	0	-3	0	multi-exon	FALSE	canonical	3	13	junction_1	3.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCCTTGGCATTTCAGTG	NA	False	NA	14	True	AATAAA	-20	NA	22854149	22858552	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_22854281_22856521_22856557_22856972
H1_mix_00080411	chr7	+	1412	5	FSM	ENSG00000228649.10	ENST00000656687.2	1408	5	-4	0	-4	0	multi-exon	FALSE	canonical	2	4	junction_3	6.72216482987438	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACAGATAAGCAGCTATTA	NA	False	NA	NA	False	AATAAA	-25	NA	22854241	22861580	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_22854281_22856521_22856557_22856972_22857017_22858570_22858831_22860546
H1_mix_00080412	chr7	+	664	1	FSM	ENSG00000230042.1	ENST00000431883.1	664	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGAAATGATTATAACTAG	NA	False	NA	NA	False	ACTAAA	-37	NA	23129177	23129841	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_23129200_23129800
H1_mix_00080413	chr7	+	1508	3	Intergenic	novelGene_1347	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTCACGCCCGGCTTGGG	2521	False	NA	NA	False	GGGGCT	-8	NA	23470532	23473620	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_23470663_23470991_23471079_23472329
H1_mix_00080414	chr7	+	337	1	FSM	ENSG00000236654.2	ENST00000428259.1	207	1	-178	48	-178	-48	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTGAACTCCGCTCCCC	5763	False	NA	NA	False	NA	NA	NA	23480574	23480911	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_23480600_23480900
H1_mix_00080415	chr7	+	1877	2	ISM	ENSG00000188732.11	ENST00000483090.1	758	3	-1246	599	-1246	0	5prime_fragment	FALSE	canonical	3	252	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTAGTGATATTACTGA	NA	False	NA	22	True	AATAAA	-25	NA	23699546	23702650	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_23700869_23702095
H1_mix_00080416	chr7	+	541	4	FSM	ENSG00000122585.8	ENST00000242152.7	555	4	0	14	0	-14	multi-exon	FALSE	canonical	2	3	junction_1	4.71404520791032	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGCATTCAAAAGTGTAT	1	True	NA	-9	True	AATAAA	-4	NA	24284189	24291848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_24284276_24285240_24285429_24289498_24289580_24291662
H1_mix_00080417	chr7	+	2775	2	Antisense	novelGene_ENSG00000287523.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	5	junction_1	0	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCCCATTTCCCCACATT	NA	False	NA	NA	False	NA	NA	NA	24396341	24400192	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr7_+_24396846_24397921
H1_mix_00080421	chr7	+	2390	7	FSM	ENSG00000086300.16	ENST00000446848.6	2613	7	223	0	107	0	multi-exon	FALSE	canonical	0	0	junction_1	55.369716953905	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATCAACTTTGCCG	53	False	NA	-6	True	ATTAAA	-5	NA	26292117	26374317	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_26292134_26346419_26346467_26360974_26361062_26364534_26364636_26365046_26365146_26371820_26372034_26372490
H1_mix_00080422	chr7	+	641	4	FSM	ENSG00000106052.14	ENST00000418691.5	641	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	674.402451557426	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGTTAGTGGTGACCAC	NA	False	NA	NA	False	NA	NA	NA	27739330	27765982	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_27739551_27748517_27748687_27758030_27758134_27765833
H1_mix_00080423	chr7	+	3365	17	FSM	ENSG00000106052.14	ENST00000543117.5	3365	17	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_1	321.663547048776	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCATTGTTGTCAAATT	-1	True	NA	25	True	ATTAAA	-29	NA	27739372	27829765	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_27739551_27748517_27748687_27758030_27758134_27765833_27766022_27769675_27769835_27785162_27785312_27785398_27785490_27787417_27787604_27792005_27792231_27793065_27793213_27794322_27794447_27796115_27796220_27799964_27800091_27816348_27816395_27816889_27817039_27827737_27827821_27828627
H1_mix_00080425	chr7	+	3079	15	NIC	ENSG00000106052.14	novel	3423	17	NA	NA	4	-10	combination_of_known_splicesites	FALSE	canonical	3	174	junction_13	304.640772057845	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGATCTGTAATTTCATTG	17	True	NA	15	True	ATTAAA	-19	NA	27740172	27829755	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_27740270_27748517_27748687_27758030_27758134_27765833_27766022_27769675_27769835_27785162_27785312_27785398_27785490_27787417_27787604_27792005_27792231_27793065_27793213_27794322_27794447_27796115_27796220_27799964_27800091_27827737_27827821_27828627
H1_mix_00080426	chr7	+	424	3	FSM	ENSG00000106069.24	ENST00000461824.1	425	3	-3	4	-3	-4	multi-exon	FALSE	canonical	2	5	junction_2	8.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACCTTTTTGGGGTACCC	-6	True	NA	NA	False	ATTAAA	-14	NA	29146585	29148653	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_29146746_29146848_29146961_29148501
H1_mix_00080427	chr7	+	3444	13	FSM	ENSG00000106069.24	ENST00000222792.11	3167	13	-277	0	-277	0	multi-exon	FALSE	canonical	3	12	junction_8	4.60298815988049	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGGAGTATGTGCAAGAA	-2	True	NA	5	True	ATTAAA	-16	NA	29194497	29514328	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_29194991_29354624_29354664_29367931_29367988_29393678_29393711_29398372_29398487_29400542_29400829_29480278_29480357_29495951_29496037_29499866_29500041_29504743_29504822_29507227_29507366_29509300_29509407_29512563
H1_mix_00080428	chr7	+	4991	1	Antisense	novelGene_ENSG00000288973.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGGGGCTGCACGCCC	NA	False	NA	NA	False	NA	NA	NA	29644307	29649298	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr7_+_29644300_29649300
H1_mix_00080432	chr7	+	2408	18	FSM	ENSG00000106105.15	ENST00000676210.1	2385	18	-23	0	-12	0	multi-exon	FALSE	canonical	0	0	junction_12	540.817240107258	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTGACCACTTGCGCTA	360	False	NA	NA	False	AAAAAG	-32	NA	30594819	30633874	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_30595144_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30606325_30606398_30609584_30609731_30612095_30612246_30615895_30616059_30617113_30617279_30621392_30621501_30622316_30622463_30626233_30626320_30628559_30628670_30631447_30631542_30632246_30632438_30633734
H1_mix_00080433	chr7	+	2548	18	FSM	ENSG00000106105.15	ENST00000675529.1	2536	18	-12	0	-12	0	multi-exon	FALSE	canonical	0	0	junction_12	533.846212449534	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGGCTGCCTGATTT	360	False	NA	-38	True	AAGAAA	-37	NA	30594819	30633976	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_30595144_30595823_30595934_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30609584_30609731_30612095_30612246_30615895_30616059_30617113_30617279_30621392_30621501_30622316_30622463_30626233_30626320_30628559_30628670_30631447_30631542_30632246_30632438_30633734
H1_mix_00080434	chr7	+	2608	19	FSM	ENSG00000106105.15	ENST00000676088.1	2602	19	-6	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	626.337189292922	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGGCTGCCTGATTT	-58	True	NA	-38	True	AAGAAA	-37	NA	30594831	30633976	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_30595144_30595823_30595934_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30606325_30606398_30609584_30609731_30612095_30612246_30615895_30616059_30617113_30617279_30621392_30621501_30622316_30622463_30626233_30626320_30628559_30628670_30631447_30631542_30632246_30632438_30633734
H1_mix_00080435	chr7	+	1257	7	FSM	ENSG00000106105.15	ENST00000454308.6	1252	7	-5	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	528.79884854472	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGCTTCACTGTTAGATT	-31	True	NA	NA	False	AATAAA	-29	NA	30594858	30605448	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_30595144_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30604989
H1_mix_00080437	chr7	+	2441	17	FSM	ENSG00000106105.15	ENST00000676164.1	2441	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	476.526756856318	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAACAAACTTGTGATCTA	-1	True	NA	10	True	ATTAAA	-13	NA	30594888	30634024	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_30595144_30598795_30598898_30599946_30600050_30601058_30601225_30603033_30603123_30603495_30603573_30609584_30609731_30612095_30612246_30615895_30616059_30617113_30617279_30621392_30621501_30622316_30622463_30626233_30626320_30628559_30628670_30631447_30631542_30632246_30632438_30633734
H1_mix_00080438	chr7	+	3164	2	FSM	ENSG00000106125.14	ENST00000494187.1	3573	2	190	219	190	-219	multi-exon	FALSE	canonical	3	35	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATAAGGAGACACTTGTC	8238	False	NA	NA	False	NA	NA	NA	30779725	30786425	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_30782213_30785748
H1_mix_00080439	chr7	+	441	6	FSM	ENSG00000078549.15	ENST00000436116.1	441	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	18.8531164532551	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGTGAGGTAAGACCTT	NA	False	NA	NA	False	NA	NA	NA	31086970	31104899	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_31087004_31087626_31087697_31092643_31092736_31095666_31095751_31103236_31103367_31104867
H1_mix_00080440	chr7	+	244	1	FSM	ENSG00000226421.1	ENST00000435239.1	897	1	687	-34	687	34	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTTGTATTATATAACAT	NA	False	NA	NA	False	NA	NA	NA	32472199	32472443	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_32472200_32472400
H1_mix_00080442	chr7	+	727	3	FSM	ENSG00000122642.11	ENST00000469202.5	711	3	-21	5	0	-5	multi-exon	FALSE	canonical	3	9	junction_1	68.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTCCGTCTCCTTCTTG	-30	True	NA	NA	False	NA	NA	NA	32957403	32976499	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_32957795_32975181_32975372_32976353
H1_mix_00080443	chr7	+	3619	11	FSM	ENSG00000122642.11	ENST00000538336.5	3621	11	0	2	0	0	multi-exon	TRUE	canonical	1	1	junction_1	62.4579858785088	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTGGTTTTCTGATATT	-30	True	NA	4	True	AATAAA	-44	NA	32957403	33006928	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_32957795_32963543_32963703_32974616_32974763_32975181_32975372_32976353_32976500_32980363_32980554_32988506_32988653_32996162_32996350_33000114_33000261_33002675_33002840_33005174
H1_mix_00080447	chr7	+	638	4	FSM	ENSG00000122642.11	ENST00000468510.5	653	4	0	15	0	-15	multi-exon	FALSE	canonical	3	146	junction_1	11.1455023315337	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGTAAGGACTTCTAAGG	9083	False	NA	NA	False	NA	NA	NA	32988585	33002913	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_32988653_32996162_32996350_33000114_33000261_33002675
H1_mix_00080448	chr7	+	1982	11	FSM	ENSG00000122507.21	ENST00000434373.3	1982	11	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	28.7513477944948	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATATCTTGGATTTTA	13	False	NA	NA	False	AATAAA	-14	NA	33344606	33605626	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_33344635_33349067_33349171_33351218_33351324_33352858_33352874_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33505462_33505646_33533953_33534177_33604864
H1_mix_00080449	chr7	+	1651	9	NIC	ENSG00000122507.21	novel	549	5	NA	NA	28	38	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	38.7040049607273	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGCTCTACATTATTTC	-13	True	NA	NA	False	NA	NA	NA	33351954	33605670	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_33352050_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33505462_33505646_33533953_33534177_33604864_33604976_33605194
H1_mix_00080450	chr7	+	1658	9	NIC	ENSG00000122507.21	novel	549	5	NA	NA	67	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	51.6065342277507	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATATCTTGGATTTTA	26	False	NA	NA	False	AATAAA	-14	NA	33351993	33605626	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_33352050_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33505462_33505736_33533953_33534177_33604864_33604976_33605194
H1_mix_00080452	chr7	+	2332	13	NIC	ENSG00000122545.21	novel	4399	13	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	23	junction_10	434.187267585466	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATATTGTGTGAGGTCTTA	7	True	NA	14	True	AATAAA	-14	NA	35801230	35905304	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_35801271_35832797_35832901_35863551_35863659_35872665_35872767_35873640_35873776_35879822_35879941_35882483_35882577_35883890_35883988_35885827_35885880_35890667_35890794_35898214_35898384_35903075_35903216_35904253
H1_mix_00080453	chr7	+	4314	23	NNC	ENSG00000011426.11	novel	4661	23	NA	NA	-151	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_9	111.278900972524	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTATAAACACTAAATTCT	155	False	NA	-3	True	ATTAAA	-16	NA	36390019	36453655	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_36390045_36396265_36396420_36399078_36399394_36406180_36406567_36407733_36407957_36410513_36410705_36411058_36411167_36415757_36415885_36419243_36419468_36420168_36420315_36420596_36420745_36421856_36421993_36422632_36422810_36423816_36423944_36424544_36424594_36424685_36424743_36425701_36425741_36426014_36426037_36426915_36427029_36439203_36439291_36443754_36443863_36449664_36449838_36452476
H1_mix_00080454	chr7	+	829	9	FSM	ENSG00000011426.11	ENST00000446635.5	829	9	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	143.083836875449	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGAGTGTATCTTGAACT	52	False	NA	NA	False	NA	NA	NA	36420223	36426034	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_36420315_36420611_36420745_36421856_36421993_36422632_36422810_36423816_36423944_36424544_36424594_36424685_36424743_36425701_36425741_36426014
H1_mix_00080457	chr7	+	2466	6	FSM	ENSG00000106536.21	ENST00000517348.1	1578	6	-290	-598	-290	598	multi-exon	FALSE	canonical	0	0	junction_2	6.99714227381436	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTACCTAACCACCTGCA	NA	False	NA	NA	False	AATAAA	-9	NA	39012790	39374306	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_39013560_39085859_39086032_39204234_39204327_39207391_39207621_39339641_39340016_39373476
H1_mix_00080459	chr7	+	352	1	FSM	ENSG00000106540.4	ENST00000446267.1	564	1	364	-152	364	152	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTAAAACTTTCTGGTTG	425	False	NA	NA	False	NA	NA	NA	39610080	39610432	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_39610100_39610400
H1_mix_00080462	chr7	+	4779	11	NIC	ENSG00000188185.13	novel	1614	7	NA	NA	-18237	1531	intron_retention	FALSE	canonical	3	8	junction_8	7.53657747256671	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGAGTGAGTTTCTGCAC	NA	False	NA	35	True	TATAAA	-20	NA	39763451	39794623	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_39763672_39767403_39767671_39771004_39771092_39779270_39779386_39780502_39780625_39781234_39781886_39782734_39782800_39788481_39788605_39789353_39789545_39791593_39791652_39791743
H1_mix_00080463	chr7	+	2960	4	FSM	ENSG00000065883.17	ENST00000647453.1	2998	4	0	38	0	-38	multi-exon	FALSE	canonical	3	106	junction_1	22.2910046630673	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGACTGTCTCCAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	39998249	40049168	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_39999501_40001860_40002032_40045835_40046026_40047820
H1_mix_00080466	chr7	+	946	2	Antisense	novelGene_ENSG00000232006.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTCAACCTTTGCTCTTT	NA	False	NA	NA	False	TATAAA	-19	NA	42965356	42966650	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr7_+_42965585_42965932
H1_mix_00080467	chr7	+	5373	28	NNC	ENSG00000002746.15	novel	9453	30	NA	NA	0	141	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_8	4.5653312757197	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACATACCTCCATTACTA	-10	True	NA	21	True	ATTAAA	-30	NA	43112628	43562193	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_43112938_43311762_43312088_43320634_43320743_43360885_43360981_43396813_43396890_43407561_43407732_43438002_43438146_43442528_43442630_43444214_43445571_43450827_43450930_43456296_43456448_43463659_43463800_43466446_43466569_43468919_43469106_43479609_43479745_43492074_43492181_43493083_43493181_43500698_43500783_43501212_43501323_43507136_43507258_43508017_43508132_43508968_43509122_43541162_43541262_43541868_43541999_43550444_43550592_43552221_43552337_43554591_43554791_43561814
H1_mix_00080468	chr7	+	244	1	FSM	ENSG00000237972.1	ENST00000418303.1	1358	1	830	284	830	-284	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCCTGTCGAGGAAGTCT	873	False	NA	NA	False	NA	NA	NA	43919526	43919770	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_43919500_43919800
H1_mix_00080469	chr7	+	866	8	FSM	ENSG00000078967.13	ENST00000450743.5	849	8	-17	0	-15	0	multi-exon	FALSE	canonical	3	9	junction_1	20.1129463839811	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTGTTGTTATGATCTG	-29	True	NA	NA	False	NA	NA	NA	43926420	43952907	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_43926557_43928013_43928112_43938430_43938495_43942825_43942858_43942953_43943032_43948631_43948738_43950598_43950693_43952649
H1_mix_00080471	chr7	+	2019	11	FSM	ENSG00000136279.21	ENST00000490734.6	2004	11	-15	0	-15	0	multi-exon	FALSE	canonical	1	1	junction_2	135.031996208306	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCCAGTTTGGTCTACA	NA	False	NA	23	True	NA	NA	NA	44044624	44061714	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44044821_44050224_44050281_44056756_44056904_44057781_44057860_44058128_44058281_44058428_44058481_44058901_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
H1_mix_00080473	chr7	+	1513	12	FSM	ENSG00000136279.21	ENST00000452943.5	1513	12	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	132.991766351738	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCCCTGCCTGTGGCCA	3	True	NA	NA	False	NA	NA	NA	44044701	44061172	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44044821_44050224_44050281_44051829_44051943_44056756_44056904_44057781_44057860_44058128_44058281_44058428_44058481_44058901_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
H1_mix_00080475	chr7	+	751	6	FSM	ENSG00000106624.11	ENST00000455443.5	751	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	61.6233721894542	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGGGCAAGGACCACAA	390	False	NA	NA	False	AAAAAG	-43	NA	44104793	44109162	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44104919_44106545_44106888_44107438_44107511_44108006_44108085_44108898_44108977_44109106
H1_mix_00080478	chr7	+	1193	1	FSM	ENSG00000287574.1	ENST00000658337.1	1158	1	-39	4	-39	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATACGTCAGTGTGTGTC	8421	False	NA	NA	False	ATTAAA	-32	NA	44582479	44583672	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44582500_44583700
H1_mix_00080480	chr7	+	3896	18	FSM	ENSG00000122515.16	ENST00000441627.5	5089	18	9	1184	0	0	multi-exon	FALSE	canonical	3	48	junction_6	32.2218735480744	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCGAGTCCCTCCTTTG	7336	False	NA	24	True	ATTAAA	-20	NA	44756187	44768694	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44756300_44756424_44756540_44756946_44757150_44757377_44757562_44757847_44758109_44759280_44759461_44760150_44760229_44760424_44760594_44761448_44761594_44761694_44761906_44762880_44762987_44763255_44763414_44764418_44764487_44764940_44765010_44765334_44765580_44766163_44766334_44766420_44766664_44767515
H1_mix_00080481	chr7	+	3800	18	FSM	ENSG00000122515.16	ENST00000433667.5	3800	18	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	41.7329622529758	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCGAGTCCCTCCTTTG	7336	False	NA	24	True	ATTAAA	-20	NA	44756187	44768694	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44756300_44756424_44756540_44757042_44757150_44757377_44757562_44757847_44758109_44759280_44759461_44760150_44760229_44760424_44760594_44761448_44761594_44761694_44761906_44762880_44762987_44763255_44763414_44764418_44764487_44764940_44765010_44765334_44765580_44766163_44766334_44766420_44766664_44767515
H1_mix_00080484	chr7	+	2481	2	FSM	ENSG00000196262.15	ENST00000678643.1	2460	2	-21	0	0	0	multi-exon	FALSE	canonical	3	18613	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTAAATAACAATTGTC	-1	True	NA	-12	True	NA	NA	NA	44796679	44801613	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44796794_44799246
H1_mix_00080485	chr7	+	375	1	FSM	ENSG00000272768.1	ENST00000608450.1	1441	1	1006	60	1006	-60	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTAAGGAAATTGACTGC	99	False	NA	NA	False	ATTAAA	-2	NA	44885958	44886333	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44886000_44886300
H1_mix_00080487	chr7	+	252	2	FSM	ENSG00000164742.16	ENST00000468353.1	763	2	511	0	511	0	multi-exon	FALSE	canonical	3	38	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCCCACCCTGCCCTGC	NA	False	NA	NA	False	NA	NA	NA	45684895	45686040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_45685069_45685961
H1_mix_00080490	chr7	+	526	1	FSM	ENSG00000225507.1	ENST00000411911.1	526	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTGTAATTAGGCAATTA	NA	False	NA	NA	False	NA	NA	NA	47956792	47957318	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_47956800_47957300
H1_mix_00080492	chr7	+	3112	5	FSM	ENSG00000170419.11	ENST00000407838.7	3112	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	2.8613807855649	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGTATTTTCTTTCAAA	13	False	NA	NA	False	AATAAA	-30	NA	54542324	54571080	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_54542810_54544621_54544789_54546946_54546998_54549833_54550171_54569008
H1_mix_00080493	chr7	+	276	3	FSM	ENSG00000146648.20	ENST00000485503.1	665	3	0	389	0	-389	multi-exon	FALSE	canonical	2	7	junction_2	0.5	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAAATTGCAGTCTGTGC	48	False	NA	NA	False	NA	NA	NA	55192810	55200413	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_55192842_55198716_55198864_55200315
H1_mix_00080494	chr7	+	507	3	FSM	ENSG00000146729.10	ENST00000470036.5	497	3	-10	0	0	0	multi-exon	FALSE	canonical	3	911	junction_2	22	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTATCAGACTTTAGAATG	-8	True	NA	NA	False	NA	NA	NA	55964584	55978599	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_55964702_55978125_55978266_55978349
H1_mix_00080498	chr7	+	420	3	FSM	ENSG00000146731.11	ENST00000494736.1	411	3	-9	0	-9	0	multi-exon	FALSE	canonical	3	3052	junction_1	193.5	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAAATTTTCCCATATG	3283	False	NA	NA	False	NA	NA	NA	56061668	56063178	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_56061850_56062682_56062756_56063012
H1_mix_00080499	chr7	+	1906	8	FSM	ENSG00000129103.19	ENST00000652303.1	1906	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	146.70712181703	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATTTGTGTCTTTGATC	2528	False	NA	29	True	AATAAA	-23	NA	56064223	56080669	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_56064379_56068481_56068639_56072996_56073112_56074173_56074219_56074585_56074737_56076833_56076890_56078101_56078187_56079527
H1_mix_00080502	chr7	+	1807	8	FSM	ENSG00000129103.19	ENST00000423763.5	1792	8	-15	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	141.156881894304	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAATAAAATCTCCTGCAA	3	True	NA	-2	True	NA	NA	NA	56064285	56080638	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_56064379_56068481_56068639_56072996_56073112_56074173_56074219_56076833_56076890_56078101_56078187_56078363_56078509_56079527
H1_mix_00080506	chr7	+	351	1	FSM	ENSG00000223974.1	ENST00000454982.1	569	1	287	-69	287	69	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGCCTCCCAGGTTAAAG	NA	False	NA	NA	False	NA	NA	NA	64551784	64552135	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_64551800_64552100
H1_mix_00080509	chr7	+	511	3	FSM	ENSG00000286456.2	ENST00000690256.1	524	3	13	0	13	0	multi-exon	FALSE	canonical	3	10	junction_2	112	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGGGCCCAGCACCTAG	10	False	NA	7	True	AATAAA	-16	NA	64574707	64604053	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_64574849_64599658_64599783_64603807
H1_mix_00080512	chr7	+	2673	4	FSM	ENSG00000197008.10	ENST00000359735.7	2679	4	5	1	5	0	multi-exon	FALSE	canonical	3	15	junction_2	27.3130005674953	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATAAGGTTTTGTTTTAGT	NA	False	NA	19	True	AATAAA	-33	NA	64794392	64833680	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_64794572_64814917_64815045_64830939_64831077_64831450
H1_mix_00080513	chr7	+	2296	2	FSM	ENSG00000197008.10	ENST00000430838.2	2308	2	0	12	0	0	multi-exon	FALSE	canonical	3	94	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTGTCAAAACTCAGCAT	23	False	NA	3	True	AATAAA	-17	NA	64794489	64833664	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_64794572_64831450
H1_mix_00080514	chr7	+	934	3	FSM	ENSG00000286342.2	ENST00000653683.2	933	3	-4	3	-4	-1	multi-exon	FALSE	canonical	3	4	junction_1	3	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTCTGTGTGTGTGTCT	407	False	NA	2	True	NA	NA	NA	64947735	64950721	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_64947858_64949115_64949410_64950203
H1_mix_00080517	chr7	+	3020	11	NIC	ENSG00000228409.7	novel	2310	12	NA	NA	0	1	intron_retention	FALSE	canonical	2	4	junction_2	30.4698211350182	214	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAATGGTTTAATTTTA	-9	True	NA	NA	False	ATTAAA	-19	NA	65751059	65763674	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_65751279_65752163_65752311_65755779_65755953_65756468_65756575_65757982_65758138_65758235_65758318_65759174_65759272_65759859_65759999_65760423_65760557_65761645_65763021_65763280
H1_mix_00080518	chr7	+	2172	14	FSM	ENSG00000126522.17	ENST00000672586.1	2172	14	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_2	61.0088750940114	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAATAAAGTGGGCGCGAG	-2	True	NA	-15	True	NA	NA	NA	66075799	66092930	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_66075857_66076038_66076094_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66086743_66087792_66088806_66088922_66089090_66089176_66089275_66089336_66089611_66089696_66092005_66092087_66092556_66092664_66092767
H1_mix_00080519	chr7	+	1458	16	FSM	ENSG00000126522.17	ENST00000673518.1	1436	16	-22	0	0	0	multi-exon	FALSE	canonical	2	33	junction_7	54.1509823446342	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTGCTGTGTGTTTCCTG	-2	True	NA	8	True	AATAAA	-15	NA	66075799	66092953	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_66075857_66076038_66076094_66081802_66081998_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66087333_66087387_66087728_66087792_66088806_66088922_66089090_66089176_66089275_66089336_66089611_66089696_66092005_66092087_66092556_66092664_66092767
H1_mix_00080520	chr7	+	347	4	FSM	ENSG00000241258.7	ENST00000486848.1	458	4	7	104	7	-104	multi-exon	FALSE	canonical	3	59	junction_2	2.94392028877595	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAGTAGGAAGAGCGTG	26	True	NA	NA	False	AGTAAA	-3	NA	66114865	66134385	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_66114971_66127703_66127741_66130743_66130843_66134279
H1_mix_00080521	chr7	+	2889	8	NNC	ENSG00000169902.15	novel	1981	6	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	62.6268508627058	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGTAGTTACATGTTTT	-1	True	NA	18	True	AATAAA	-19	NA	66205333	66360443	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_66205523_66240324_66241271_66286510_66286710_66352504_66352556_66356824_66356872_66358798_66359154_66359279_66359338_66359399
H1_mix_00080522	chr7	+	786	2	FSM	ENSG00000237310.3	ENST00000669130.1	713	2	-73	0	-16	0	multi-exon	FALSE	canonical	3	8	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACTCTTCTGGTTTTTGG	NA	False	NA	20	True	ATTAAA	-21	NA	66493642	66495470	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_66494213_66495254
H1_mix_00080524	chr7	+	1234	1	NIC	ENSG00000226824.8	novel	447	2	NA	NA	0	-10515	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTACTGATTCATATCTG	1	True	NA	NA	False	GATAAA	-18	NA	66654550	66655784	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_66654600_66655800
H1_mix_00080525	chr7	+	580	2	Intergenic	novelGene_1368	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	10	junction_1	0	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTATTTTTGAAGTATGTT	NA	False	NA	NA	False	NA	NA	NA	66706138	66707090	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_66706553_66706924
H1_mix_00080526	chr7	+	4810	11	NNC	ENSG00000154710.18	novel	2281	10	NA	NA	-737	-3	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	76.4248650636689	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGATTTGGTTCTTTCT	48	False	NA	14	True	AATAAA	-26	NA	66739995	66811461	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_66740793_66768830_66769026_66770322_66770468_66771882_66772079_66775226_66775394_66783671_66783842_66795510_66795593_66797373_66797507_66799322_66799415_66805139_66805397_66808885
H1_mix_00080527	chr7	+	3719	9	NNC	ENSG00000154710.18	novel	3733	9	NA	NA	12	-5	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_3	51.4022129873802	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTGATTTGGTTCTTT	12	False	NA	12	True	AATAAA	-24	NA	66740744	66811459	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_66740793_66771882_66772079_66775226_66775394_66783671_66783842_66795510_66795593_66797373_66797507_66799322_66799415_66805139_66805397_66808885
H1_mix_00080528	chr7	+	4724	1	FSM	ENSG00000273142.1	ENST00000610177.1	3441	1	-1326	43	-1326	-43	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTCCTGCCTTAATAAAT	4879	False	NA	-29	True	NA	NA	NA	66901530	66906254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_66901500_66906300
H1_mix_00080530	chr7	+	4208	7	NNC	ENSG00000106609.16	novel	4229	7	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	175.536954007475	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGCTCCGCGTCTTCTTC	1	True	NA	18	True	AATAAA	-13	NA	66921240	66958550	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_66921462_66941847_66942025_66944975_66945262_66948543_66948695_66950955_66951136_66953225_66953370_66955501
H1_mix_00080535	chr7	+	2741	5	FSM	ENSG00000158321.18	ENST00000403018.3	4575	5	-1169	3003	-33	682	multi-exon	FALSE	canonical	1	5	junction_4	7.72576857018122	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATGTGAACAAATTGGAAAA	1	True	NA	NA	False	TTTAAA	-17	NA	69598441	70291236	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_69599963_69899285_69899499_70118131_70118234_70134535_70134572_70290367
H1_mix_00080536	chr7	+	7494	15	NIC	ENSG00000158321.18	novel	4583	14	NA	NA	-1927	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_5	112.987469957279	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	48	True	ATTAAA	-30	NA	70692130	70792485	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_70695046_70698568_70698621_70762869_70763342_70764751_70765006_70766113_70766335_70768023_70768069_70771548_70771645_70774027_70774100_70775356_70775387_70777102_70777175_70781614_70781757_70784941_70785020_70785954_70786039_70787208_70787432_70789747
H1_mix_00080537	chr7	+	7831	11	NIC	ENSG00000158321.18	novel	4160	14	NA	NA	-1927	201	combination_of_known_splicesites	FALSE	canonical	3	21	junction_5	104.461524017219	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGTCGCTTGTGGTTTGT	NA	False	NA	14	True	TATAAA	-14	NA	70692130	70793068	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_70695046_70698568_70698621_70762869_70763342_70764754_70765006_70766113_70766335_70777102_70777175_70781614_70781757_70784941_70785020_70785954_70786039_70787208_70787432_70789747
H1_mix_00080538	chr7	+	6053	13	NIC	ENSG00000158321.18	novel	4160	14	NA	NA	1	201	combination_of_known_splicesites	FALSE	canonical	3	19	junction_6	114.560270406261	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGTCGCTTGTGGTTTGT	14	True	NA	14	True	TATAAA	-14	NA	70694058	70793068	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_70695046_70698568_70698621_70762869_70763342_70764751_70765006_70766113_70766356_70771548_70771645_70775356_70775387_70777102_70777175_70781614_70781757_70784941_70785020_70785954_70786039_70787208_70787432_70789747
H1_mix_00080546	chr7	+	1294	7	FSM	ENSG00000229018.5	ENST00000506558.2	1336	7	42	0	42	0	multi-exon	FALSE	canonical	2	4	junction_6	10.1885011437186	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCACAAATGGTTCCTCT	NA	False	NA	NA	False	NA	NA	NA	73005582	73021103	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_73006175_73009443_73009584_73011468_73011556_73011731_73011835_73013091_73013278_73016328_73016418_73021006
H1_mix_00080547	chr7	+	858	7	FSM	ENSG00000285702.1	ENST00000650609.1	858	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	13.8443731048635	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATTTCAAAGGAATATTA	NA	False	NA	NA	False	NA	NA	NA	73039695	73069506	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_73039782_73041237_73041422_73044471_73044561_73065530_73065671_73067561_73067649_73067814_73067928_73069347
H1_mix_00080548	chr7	+	714	6	FSM	ENSG00000174384.9	ENST00000333674.5	710	6	-4	0	-4	0	multi-exon	FALSE	canonical	2	5	junction_3	14.7729482500955	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCACAAATGGTTCCTCT	NA	False	NA	NA	False	NA	NA	NA	73093652	73105389	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_73093797_73095681_73095769_73095934_73096048_73097383_73097568_73100617_73100707_73105292
H1_mix_00080549	chr7	+	422	4	ISM	ENSG00000205578.6	ENST00000380760.4	2475	8	799	5260	799	-5260	internal_fragment	FALSE	canonical	3	52	junction_1	62.845489540265	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCTGGAGTGGGGCCGT	NA	False	NA	NA	False	NA	NA	NA	73294295	73295901	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_73294316_73294754_73294877_73295321_73295425_73295724
H1_mix_00080550	chr7	+	1424	1	ISM	ENSG00000205578.6	ENST00000380760.4	2475	8	3481	2760	3481	-2760	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAGCACAACTGAGAGC	NA	False	NA	NA	False	NA	NA	NA	73296977	73298401	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_73297000_73298400
H1_mix_00080551	chr7	+	465	2	ISM	ENSG00000205578.6	ENST00000380760.4	2475	8	6979	-207	6979	207	3prime_fragment	FALSE	canonical	2	15	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGCCAAAGCCCGGGACC	NA	False	NA	NA	False	NA	NA	NA	73300475	73301368	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_73300639_73301066
H1_mix_00080553	chr7	+	1279	12	FSM	ENSG00000071462.12	ENST00000430270.5	1260	12	-19	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	250.54515767234	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCAACATAATGAAACTTC	14	True	NA	NA	False	NA	NA	NA	73683606	73698104	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_73683674_73683766_73684001_73686635_73686732_73686817_73686901_73686998_73687096_73690915_73691013_73692595_73692647_73693328_73693415_73693623_73693670_73693991_73694051_73697604_73697695_73697831
H1_mix_00080554	chr7	+	3886	2	FSM	ENSG00000071462.12	ENST00000471215.1	3886	2	0	0	0	0	multi-exon	FALSE	canonical	3	831	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	1466	False	NA	-70	True	AATGAA	-18	NA	73694113	73698136	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_73697695_73697831
H1_mix_00080555	chr7	+	2226	32	FSM	ENSG00000049540.19	ENST00000445912.5	2583	32	357	0	2	0	multi-exon	FALSE	canonical	2	4	junction_21	5.94809319825348	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTTTGTAACCCCATC	9	False	NA	NA	False	NA	NA	NA	74028145	74068763	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_74028270_74035363_74035415_74036554_74036585_74037706_74037740_74041215_74041252_74042613_74042707_74042983_74043035_74043117_74043169_74043878_74043921_74045221_74045294_74046187_74046218_74046695_74046768_74047674_74047717_74048141_74048202_74048502_74048557_74051749_74051840_74051923_74051984_74053162_74053310_74054715_74054770_74056270_74056436_74056671_74056714_74057639_74057697_74059885_74060048_74060139_74060185_74060375_74060502_74061100_74061140_74063152_74063225_74063309_74063370_74063620_74063696_74065693_74065733_74066731_74066777_74068656
H1_mix_00080556	chr7	+	3054	30	FSM	ENSG00000049540.19	ENST00000380575.8	3043	30	-11	0	2	0	multi-exon	FALSE	canonical	2	5	junction_2	5.61698629847794	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGGGGATTATTTTTGA	9	False	NA	10	True	AATAAA	-22	NA	74028145	74069678	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_74028270_74035363_74035415_74037706_74037740_74041215_74041252_74042613_74042707_74042983_74043035_74043117_74043169_74043878_74043921_74045221_74045294_74046187_74046218_74046695_74046768_74047674_74047717_74048141_74048202_74048502_74048557_74051749_74051840_74051923_74051984_74053162_74053310_74054715_74054770_74056270_74056436_74056671_74056714_74059885_74060048_74060139_74060185_74060375_74060502_74061100_74061140_74063152_74063225_74063309_74063370_74063620_74063696_74065693_74065733_74066731_74066777_74068656
H1_mix_00080560	chr7	+	979	10	FSM	ENSG00000263001.8	ENST00000443166.5	979	10	0	0	0	0	multi-exon	FALSE	canonical	3	1449	junction_9	75.9429610519193	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTTCCTAGCCAACAGGT	23	False	NA	NA	False	AATAAA	-18	NA	74658030	74717066	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_74658069_74689123_74689228_74690972_74691112_74698960_74699096_74700246_74700431_74700605_74700635_74705163_74705219_74706389_74706434_74711031_74711110_74716893
H1_mix_00080563	chr7	+	481	4	NNC	ENSG00000123965.13	novel	516	4	NA	NA	-3339	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_3	6.34209919681348	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAGTAAATTAATCCTGG	-9	True	NA	NA	False	NA	NA	NA	74890776	74897835	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_74890847_74894117_74894258_74896145_74896233_74897651
H1_mix_00080564	chr7	+	413	1	Antisense	novelGene_ENSG00000184616.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACGGTCCCTGGAGCTCT	NA	False	NA	NA	False	NA	NA	NA	74906238	74906651	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr7_+_74906200_74906700
H1_mix_00080565	chr7	+	2638	10	FSM	ENSG00000174428.19	ENST00000611835.4	3058	10	259	161	259	-149	multi-exon	TRUE	canonical	2	6	junction_8	9.36897954837013	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAACCACTGTGCCCAGC	NA	False	NA	NA	False	NA	NA	NA	75125915	75149656	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_75125971_75126341_75126386_75133134_75133213_75135000_75135058_75136784_75136851_75138949_75139028_75141102_75141187_75142481_75142666_75143949_75143979_75147693
H1_mix_00080566	chr7	+	1888	9	NIC	ENSG00000205583.14	novel	894	9	NA	NA	-4	79	intron_retention	FALSE	canonical	3	36	junction_8	33.0378570733636	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGATCTCAGCCCACTGCA	-5	True	NA	90	True	NA	NA	NA	75359226	75367725	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_75359410_75361373_75361460_75361971_75362089_75364632_75364757_75365254_75365354_75365563_75365644_75365951_75366060_75366323_75366439_75366749
H1_mix_00080567	chr7	+	2616	9	Fusion	ENSG00000205583.14_ENSG00000178809.12	novel	1192	8	NA	NA	0	1331	intron_retention	FALSE	canonical	2	4	junction_6	46.2505067539805	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACATGATGAAACCGCCTC	-1	True	NA	NA	False	NA	NA	NA	75359230	75396714	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_+_75359410_75361373_75361460_75361971_75362089_75364632_75364757_75365254_75365354_75365563_75365644_75366323_75366439_75385082_75385157_75394972
H1_mix_00080569	chr7	+	1196	7	FSM	ENSG00000223705.10	ENST00000687920.1	1198	7	0	2	0	0	multi-exon	FALSE	canonical	3	67	junction_6	129.867132956042	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGATAGATCACAGTTTTT	NA	False	NA	15	True	AATAAA	-16	NA	75410349	75416785	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_75410461_75414884_75415024_75415119_75415235_75415591_75415771_75415980_75416192_75416274_75416416_75416485
H1_mix_00080570	chr7	+	1274	6	FSM	ENSG00000223705.10	ENST00000691741.1	1283	6	0	9	0	0	multi-exon	FALSE	canonical	3	103	junction_4	117.894868420979	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGATAGATCACAGTTTTT	NA	False	NA	15	True	AATAAA	-16	NA	75410349	75416785	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_75410461_75414884_75415024_75415119_75415235_75415591_75415779_75415980_75416192_75416274
H1_mix_00080571	chr7	+	4025	6	NIC	ENSG00000223705.10	novel	1535	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	152	junction_2	93.8496670212527	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGCCAGGAGGAGAATGA	32	False	NA	NA	False	NA	NA	NA	75410394	75416126	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_75410461_75410605_75411575_75411654_75411760_75412788_75415024_75415119_75415235_75415591
H1_mix_00080572	chr7	+	2448	9	NIC	ENSG00000223705.10	novel	1535	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	57	junction_4	122.585110739437	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATAGATCACAGTTTTTT	32	False	NA	16	True	AATAAA	-17	NA	75410394	75416786	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_75410461_75410605_75411575_75411654_75411760_75412788_75412933_75414884_75415024_75415119_75415235_75415591_75415779_75415980_75416192_75416274
H1_mix_00080574	chr7	+	1562	5	FSM	ENSG00000223705.10	ENST00000428392.1	1562	5	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_3	109.814331942602	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	4117	False	NA	17	True	AATAAA	-18	NA	75414479	75416787	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_75415024_75415119_75415235_75415591_75415771_75415980_75416192_75416274
H1_mix_00080577	chr7	+	3329	5	NNC	ENSG00000177679.16	novel	2150	4	NA	NA	-2005	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	18.4712614620659	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGGTGGTGAGACCAGGC	7536	False	NA	22	True	AATAAA	-18	NA	76280608	76287288	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_76281803_76282647_76282873_76282963_76283102_76283523_76283622_76285614
H1_mix_00080578	chr7	+	1477	9	FSM	ENSG00000188372.15	ENST00000336517.8	1483	9	2	4	2	-2	multi-exon	TRUE	canonical	0	0	junction_1	14.2192651005599	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATCTGGTCGTGGTGTGG	-10	True	NA	NA	False	AATAAA	-11	NA	76397519	76442067	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_76397798_76425051_76425277_76429514_76429634_76432926_76433031_76433469_76433648_76434037_76434156_76440249_76440342_76440474_76440612_76441841
H1_mix_00080581	chr7	+	2359	7	Fusion	ENSG00000243566.7_ENSG00000230305.2	novel	2250	6	NA	NA	-117	-3995	multi-exon	FALSE	non_canonical	0	0	junction_6	39.8538998509974	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCAAATATTAGCTGGGC	3	True	NA	NA	False	ACTAAA	-1	NA	76510407	76528697	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_+_76510738_76510902_76511053_76511656_76511883_76513083_76513164_76513946_76514077_76515044_76515457_76527666
H1_mix_00080582	chr7	+	1636	11	FSM	ENSG00000265479.7	ENST00000584900.5	1636	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_10	44.395495266975	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACATCTCCCCTGGGTCC	NA	False	NA	NA	False	AATAAA	-15	NA	76980948	77023761	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_76981261_76990268_76990370_77000308_77000389_77002162_77002322_77004217_77004308_77005549_77005776_77011879_77012020_77013911_77013999_77015671_77015856_77018908_77018998_77023593
H1_mix_00080583	chr7	+	3094	18	FSM	ENSG00000127947.16	ENST00000415482.6	2316	18	11	-789	11	0	multi-exon	FALSE	canonical	3	14	junction_1	67.917311826034	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTACTTGTTGCCTTGGCTT	6	True	NA	19	True	ATTAAA	-23	NA	77538045	77640069	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_77538107_77571077_77571187_77581426_77581504_77583554_77583651_77585542_77585582_77592184_77592257_77597841_77597902_77600663_77600807_77607234_77607302_77610764_77610843_77610947_77611047_77618479_77618566_77626704_77627676_77632347_77632426_77635781_77635850_77637017_77637049_77638623_77638732_77639218
H1_mix_00080584	chr7	+	1838	11	NIC	ENSG00000006576.16	novel	1977	12	NA	NA	10	0	combination_of_known_junctions	TRUE	canonical	1	7	junction_10	36.1592311865172	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTTAATTTTGTTTT	40	False	NA	4	True	AATAAA	-15	NA	77798822	77940459	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_77798972_77840220_77840301_77893607_77893665_77900710_77900781_77901761_77901921_77908792_77908959_77910244_77910410_77920278_77920466_77922622_77922779_77929108_77929328_77940029
H1_mix_00080586	chr7	+	3965	11	NIC	ENSG00000006576.16	novel	4793	18	NA	NA	1310	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_4	32.1883519304732	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTGTTTTTTTTTTTAATT	1358	False	NA	19	True	AATAAA	-16	NA	77910244	77957225	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_77910410_77920278_77920466_77922622_77922779_77929108_77929328_77940029_77940303_77940527_77940660_77942699_77942787_77949677_77949834_77951616_77951713_77953768_77953895_77954857
H1_mix_00080590	chr7	+	1480	12	FSM	ENSG00000135218.19	ENST00000419819.2	1686	12	206	0	-57	0	multi-exon	FALSE	canonical	1	1	junction_4	1.55876619995293	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCATGCAGATCGAAAACAA	7	False	NA	NA	False	NA	NA	NA	80646651	80674119	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_80646861_80656539_80656701_80661062_80661211_80662989_80663170_80664405_80664498_80666442_80666490_80669952_80670023_80670976_80671165_80671921_80672041_80672769_80672844_80673354_80673410_80673982
H1_mix_00080591	chr7	+	293	2	Genic_Genomic	ENSG00000135218.19	novel	4598	15	NA	NA	1854	-595	multi-exon	FALSE	non_canonical	0	0	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATCTCTACTAAAAATACA	4637	False	NA	NA	False	NA	NA	NA	80667767	80678679	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr7_+_80668040_80678658
H1_mix_00080593	chr7	+	627	6	FSM	ENSG00000135164.19	ENST00000414630.6	627	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	108.652473510731	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACATAAAAGGCTTTGTTT	0	True	NA	NA	False	AATAGA	-23	NA	87152439	87166520	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_87152556_87154389_87154529_87163238_87163333_87163494_87163618_87164933_87165051_87166482
H1_mix_00080594	chr7	+	796	7	FSM	ENSG00000135164.19	ENST00000449088.7	783	7	-13	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	98.8989383158384	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGAAGATAAGGATTCTC	0	True	NA	NA	False	NA	NA	NA	87152439	87173617	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_87152556_87154389_87154529_87163494_87163618_87164933_87165051_87166482_87166606_87170994_87171090_87173534
H1_mix_00080595	chr7	+	684	7	ISM	ENSG00000135164.19	ENST00000579850.5	3483	17	-1	16738	1	-5	5prime_fragment	FALSE	canonical	3	9	junction_3	84.4485379124799	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGAAAGAAAAGATTTCTACA	9	True	NA	NA	False	AATAAA	-37	NA	87152448	87179594	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_87152556_87163494_87163618_87164933_87165051_87170994_87171090_87173534_87173650_87174592_87174670_87179544
H1_mix_00080600	chr7	+	3194	18	FSM	ENSG00000005469.12	ENST00000331536.8	3205	18	11	0	-6	0	multi-exon	FALSE	canonical	2	9	junction_4	9.65136202446761	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTCTGGTGCTTTTTGA	3	True	NA	4	True	AATAAA	-17	NA	87345674	87399794	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_87345768_87346339_87346431_87349047_87349184_87359205_87359331_87361389_87361572_87361727_87361853_87369375_87369485_87375631_87375726_87375827_87375954_87377348_87377451_87381909_87381994_87382073_87382182_87382412_87382544_87391588_87391713_87392565_87392645_87392729_87392824_87392947_87393068_87398523
H1_mix_00080601	chr7	+	553	2	FSM	ENSG00000005469.12	ENST00000469785.1	553	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTACTGGTATATTCCA	NA	False	NA	NA	False	NA	NA	NA	87375234	87375889	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_87375726_87375827
H1_mix_00080602	chr7	+	523	4	FSM	ENSG00000005469.12	ENST00000479014.1	523	4	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	0.816496580927726	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATGCAGGTGATAATTTG	NA	False	NA	NA	False	TTTAAA	-45	NA	87375872	87382329	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_87375954_87377348_87377451_87381909_87381994_87382073
H1_mix_00080603	chr7	+	574	3	FSM	ENSG00000006634.8	ENST00000486925.1	574	3	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_2	45.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAGAAGGGCTATATCCT	-17	True	NA	NA	False	NA	NA	NA	87876582	87885183	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_87876779_87878052_87878226_87884978
H1_mix_00080606	chr7	+	3683	4	FSM	ENSG00000164647.9	ENST00000475789.1	1054	4	-52	-2577	-52	1	multi-exon	FALSE	canonical	3	63	junction_2	9.41629792788369	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATGTTTCTCTTTGTAT	217	False	NA	8	True	AATAAA	-17	NA	90154403	90164828	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_90154544_90159757_90159873_90160804_90161318_90161913
H1_mix_00080607	chr7	+	2228	5	NIC	ENSG00000157214.14	novel	2456	6	NA	NA	19	9	combination_of_known_junctions	FALSE	canonical	3	7	junction_4	19.0459969547409	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTTTTGAAATGTTGT	17	True	NA	21	True	AATAAA	-22	NA	90211762	90237617	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_90212046_90225049_90225575_90226970_90227499_90229871_90230037_90236890
H1_mix_00080608	chr7	+	3020	23	FSM	ENSG00000105792.19	ENST00000497910.5	3032	23	12	0	12	0	multi-exon	FALSE	canonical	1	1	junction_6	5.84104173885458	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATATCTTTATACATATG	1	True	NA	9	True	AATAAA	-24	NA	90245226	90310288	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_90245545_90255422_90255483_90258097_90258164_90261946_90262057_90265300_90265378_90268285_90268331_90271525_90271676_90271780_90271959_90273986_90274111_90277072_90277122_90277212_90277335_90279676_90279894_90282891_90283057_90286280_90286400_90288233_90288353_90297748_90297831_90299866_90300060_90303968_90304107_90304743_90304821_90306900_90307099_90307767_90307855_90309262_90309368_90310067
H1_mix_00080609	chr7	+	6935	9	FSM	ENSG00000105793.16	ENST00000380058.7	6913	9	-22	0	-10	0	multi-exon	FALSE	canonical	2	2	junction_3	45.2905550308229	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCCTAGTCAAGTGAATTC	-19	True	NA	NA	False	AATAAA	-2	NA	90346684	90391013	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_90346775_90352815_90353010_90354457_90354550_90372154_90372229_90374301_90374355_90377506_90377615_90378133_90378212_90382955_90383080_90384891
H1_mix_00080611	chr7	+	656	3	FSM	ENSG00000157224.16	ENST00000462636.5	724	3	44	24	-4	-24	multi-exon	FALSE	canonical	3	13	junction_2	194.5	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTCTGAGGTCACACAC	-17	True	NA	NA	False	NA	NA	NA	90403433	90412456	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_90403550_90405518_90405609_90412006
H1_mix_00080615	chr7	+	4600	3	ISM	ENSG00000001629.10	ENST00000422095.1	2036	9	23614	-2035	-683	0	3prime_fragment	FALSE	canonical	3	96	junction_1	3.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCATTTTGTCTCATTAC	NA	False	NA	14	True	ATTAAA	-19	NA	92395185	92401383	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_92396477_92397722_92397860_92398211
H1_mix_00080617	chr7	+	448	2	FSM	ENSG00000157259.8	ENST00000644160.1	448	2	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTTTCCCCTGGAAAA	400	False	NA	NA	False	TATAAA	-36	NA	92447873	92449094	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_92447979_92448751
H1_mix_00080618	chr7	+	247	3	FSM	ENSG00000237819.6	ENST00000686356.1	593	3	116	230	1	-217	multi-exon	FALSE	canonical	0	0	junction_2	1.5	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAATCTGTGTTAAAATGC	-5	True	NA	NA	False	AGTAAA	-18	NA	92836482	92916957	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_92836564_92854908_92854954_92916836
H1_mix_00080619	chr7	+	926	2	NNC	ENSG00000127928.13	novel	1943	4	NA	NA	-268	-102197	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATACTTAGGAATATAC	NA	False	NA	NA	False	NA	NA	NA	93591304	93807662	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_93591772_93807203
H1_mix_00080623	chr7	+	352	4	FSM	ENSG00000127995.17	ENST00000417387.1	352	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	104.058744093047	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCTGTATTTAAAAAACATA	11	True	NA	NA	False	NA	NA	NA	94510070	94528250	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_94510218_94517559_94517657_94527161_94527207_94528187
H1_mix_00080624	chr7	+	2263	3	FSM	ENSG00000127995.17	ENST00000471944.5	2263	3	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	10.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTGTATTGGCAAAGT	NA	False	NA	-14	True	AATAAA	-16	NA	94551732	94556966	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_94552428_94554482_94554576_94555491
H1_mix_00080625	chr7	+	11409	19	NIC	ENSG00000158528.12	novel	3983	18	NA	NA	-7	957	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	4.82054502323001	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAATGTTCCTGTTTAT	-22	True	NA	NA	False	AATAAA	-17	NA	94907960	95297372	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_94908140_94909897_94911509_95111258_95111392_95120711_95120833_95161866_95161972_95198348_95198485_95225960_95226117_95247472_95247527_95250025_95250256_95251761_95251859_95251958_95252131_95268549_95268708_95269206_95269508_95273898_95273987_95274084_95274169_95284017_95284217_95286205_95286326_95288535_95288719_95290090
H1_mix_00080626	chr7	+	2074	1	ISM	ENSG00000158528.12	ENST00000433360.6	10547	20	386713	20	384224	-20	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAATAAAAAGAAATACTGA	9	False	NA	-7	True	AATAAA	-40	NA	95294306	95296380	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_95294300_95296400
H1_mix_00080629	chr7	+	242	1	FSM	ENSG00000232032.1	ENST00000446424.1	169	1	18	-91	18	91	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCTCCCCCGTAGCTGG	NA	False	NA	NA	False	NA	NA	NA	97908273	97908515	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_97908300_97908500
H1_mix_00080630	chr7	+	563	6	FSM	ENSG00000130429.15	ENST00000418347.6	563	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	379.319601391755	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGCACATGGAAGCCCACGC	-1	True	NA	NA	False	NA	NA	NA	99374728	99388117	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_99374782_99376443_99376575_99377337_99377456_99385701_99385779_99386684_99386790_99388038
H1_mix_00080631	chr7	+	300	1	FSM	ENSG00000130429.15	ENST00000468337.1	890	1	113	477	113	-477	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATTGCCAGTCCACGTC	1029	False	NA	NA	False	NA	NA	NA	99389206	99389506	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_99389200_99389500
H1_mix_00080634	chr7	+	1902	9	NNC	ENSG00000160917.15	novel	1823	8	NA	NA	2	31996	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	340.209769847957	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGGGCTTCATCTGA	-3	True	NA	NA	False	NA	NA	NA	99438947	99489369	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_99439186_99444788_99444840_99448120_99448274_99450275_99450372_99450701_99450796_99452367_99452441_99453965_99454137_99456431_99457372_99489283
H1_mix_00080636	chr7	+	532	4	FSM	ENSG00000198556.14	ENST00000379724.3	510	4	-22	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	12.4988888395018	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGATTGTGCCAATCTCT	1	True	NA	NA	False	AATAAA	-17	NA	99472889	99482322	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_99473057_99476402_99476481_99479660_99479788_99482162
H1_mix_00080639	chr7	+	2660	5	ISM	ENSG00000196652.12	ENST00000451158.5	3111	7	592	5757	13	-5757	internal_fragment	FALSE	canonical	3	33	junction_3	32.7452286600659	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCAATTTTAAATGTTATC	10	True	NA	NA	False	AATAAA	-18	NA	99505266	99526922	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_99506459_99512452_99512592_99519826_99519910_99520168_99520305_99525812
H1_mix_00080640	chr7	+	1601	5	FSM	ENSG00000197343.11	ENST00000320583.9	1601	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	59.1623824740012	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCTACTTTTTGGAGTA	5	True	NA	21	True	NA	NA	NA	99558405	99564705	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_99558788_99560532_99560696_99561887_99561974_99562367_99562495_99563862
H1_mix_00080643	chr7	+	4624	5	FSM	ENSG00000197343.11	ENST00000425063.5	4624	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	57.2145086494676	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTATTCTGAGAATTTGTT	-8	True	NA	9	True	AATAAA	-9	NA	99558712	99576439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_99558788_99560532_99560696_99561887_99561974_99571687_99571793_99572244
H1_mix_00080647	chr7	+	8746	4	FSM	ENSG00000106261.17	ENST00000535170.5	8758	4	12	0	-12	0	multi-exon	FALSE	canonical	0	0	junction_1	24.5809320861155	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGCTTGTGCTGGTTTGTT	6	False	NA	25	True	AATAAA	-19	NA	100015583	100041688	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100015727_100029860_100029953_100030248_100030376_100033304
H1_mix_00080648	chr7	+	9181	6	FSM	ENSG00000106261.17	ENST00000620510.1	9192	6	11	0	11	0	multi-exon	FALSE	canonical	1	6	junction_1	20.5815451315007	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGCTTGTGCTGGTTTGTT	457	False	NA	25	True	AATAAA	-19	NA	100023418	100041688	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100023462_100023551_100023933_100024153_100024308_100029860_100029953_100030248_100030376_100033304
H1_mix_00080650	chr7	+	1968	4	NNC	ENSG00000166529.16	novel	2009	4	NA	NA	14	0	intron_retention	FALSE	canonical	2	6	junction_3	61.7593897494318	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTCAGGACTATTATTAT	8	True	NA	9	True	AATAAA	-18	NA	100049807	100065040	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_100049842_100056910_100057406_100057697_100057884_100063787
H1_mix_00080651	chr7	+	3505	2	NIC	ENSG00000166529.16	novel	2009	4	NA	NA	-1272	0	intron_retention	FALSE	canonical	3	119	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTCAGGACTATTATTAT	5839	False	NA	9	True	AATAAA	-18	NA	100055638	100065040	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_100057891_100063787
H1_mix_00080653	chr7	+	1171	2	FSM	ENSG00000168090.10	ENST00000465027.1	1171	2	0	0	0	0	multi-exon	FALSE	canonical	3	2275	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATTACTATATGTTCTG	-9	True	NA	NA	False	NA	NA	NA	100088968	100090362	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100089067_100089289
H1_mix_00080655	chr7	+	743	4	FSM	ENSG00000168090.10	ENST00000483891.1	734	4	-9	0	0	0	multi-exon	FALSE	canonical	3	2405	junction_1	110.807139761941	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGAGGCCTATGCTCTGTG	760	False	NA	NA	False	NA	NA	NA	100090427	100091448	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100090488_100090591_100091153_100091237_100091331_100091419
H1_mix_00080658	chr7	+	1396	5	FSM	ENSG00000166997.8	ENST00000480692.4	1024	5	62	-434	62	2	multi-exon	FALSE	canonical	3	60	junction_4	9.66953980290686	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGGGCCCAAAGTTTCAA	1942	False	NA	35	True	ATTAAA	-25	NA	100122113	100125510	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100122386_100122480_100122578_100122783_100122907_100124513_100124632_100124724
H1_mix_00080660	chr7	+	734	3	FSM	ENSG00000188186.11	ENST00000441173.1	730	3	-4	0	0	0	multi-exon	FALSE	canonical	3	982	junction_1	393	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGATGAGGCAGGCACA	12	True	NA	NA	False	NA	NA	NA	100148933	100154010	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100148976_100149498_100149580_100153399
H1_mix_00080661	chr7	+	5122	1	Genic_Genomic	ENSG00000213413.2_ENSG00000066923.18	novel	NA	NA	NA	NA	-1857	15	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGGGGGTGAAGAGAGT	4698	False	NA	28	True	NA	NA	NA	100216383	100221505	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr7_+_100216400_100221500
H1_mix_00080662	chr7	+	5100	15	NIC	ENSG00000272752.6	novel	3634	18	NA	NA	2	0	intron_retention	FALSE	canonical	3	80	junction_1	75.4855372010467	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAGCAGTGCAAAGAGTT	1	True	NA	12	True	ATTAAA	-25	NA	100336124	100367663	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_100336221_100338178_100338265_100338772_100338890_100345864_100345969_100349716_100352479_100352563_100352915_100352996_100353124_100353209_100353271_100353372_100353484_100355142_100355241_100356749_100356884_100358219_100358367_100358689_100359080_100359336_100359538_100367348
H1_mix_00080665	chr7	+	3053	17	NIC	ENSG00000272752.6	novel	3634	18	NA	NA	1959	70	intron_retention	FALSE	canonical	3	31	junction_10	92.4029685332133	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCCCTTTTCTCCTCGTCC	2007	False	NA	37	True	AATACA	-20	NA	100338201	100367733	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_100338265_100338772_100338890_100345864_100345969_100349716_100349888_100351251_100351411_100352162_100352479_100352563_100352915_100352996_100353124_100353209_100353271_100353372_100353484_100353894_100354013_100355142_100355241_100356749_100356884_100358219_100358367_100358689_100359080_100359336_100359538_100367348
H1_mix_00080671	chr7	+	839	2	FSM	ENSG00000085514.16	ENST00000484934.1	892	2	53	0	53	0	multi-exon	FALSE	canonical	3	6	junction_1	0	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGCCTGGCCTCTCCCCA	18	False	NA	NA	False	NA	NA	NA	100373580	100374742	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100373721_100374043
H1_mix_00080672	chr7	+	779	4	FSM	ENSG00000106351.13	ENST00000477022.1	1327	4	-9	557	0	-557	multi-exon	FALSE	canonical	1	1	junction_3	20.8326666559997	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTATCCTAAAGAACTGC	-20	True	NA	NA	False	TATAAA	-16	NA	100539202	100555813	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100539568_100548821_100548916_100550395_100550512_100555609
H1_mix_00080673	chr7	+	923	7	FSM	ENSG00000106351.13	ENST00000430857.5	915	7	-8	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	14.8595274337899	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCACAGCTCCCGCCGCC	-20	True	NA	NA	False	NA	NA	NA	100539202	100562874	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100539568_100548821_100548916_100550395_100550512_100555609_100555736_100562258_100562380_100562593_100562683_100562862
H1_mix_00080674	chr7	+	928	8	FSM	ENSG00000106351.13	ENST00000429987.1	928	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	17.7660533901377	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGGGAGGGATTTTTTTC	2318	False	NA	NA	False	NA	NA	NA	100555666	100565248	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100555736_100556593_100556627_100562258_100562380_100562593_100562683_100562862_100562947_100563833_100563963_100564217_100564304_100564931
H1_mix_00080675	chr7	+	2653	1	FSM	ENSG00000184414.2	ENST00000223076.2	1006	1	-1910	263	-1910	-263	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGAGTTCTCCAG	2310	False	NA	NA	False	NA	NA	NA	100568220	100570873	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100568200_100570900
H1_mix_00080676	chr7	+	1429	9	NNC	ENSG00000106333.13	novel	960	4	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	98.4872295021035	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGGGTCAGATCTCCAT	786	False	NA	23	True	AATAAA	-14	NA	100603187	100608171	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_100603294_100603429_100603539_100603958_100604218_100605090_100605216_100605675_100605813_100606415_100606631_100607451_100607524_100607636_100607808_100607936
H1_mix_00080677	chr7	+	541	2	FSM	ENSG00000106333.13	ENST00000468214.1	541	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGACGCGGGAGGTGGGAG	-8	True	NA	NA	False	NA	NA	NA	100604437	100605566	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100604503_100605090
H1_mix_00080679	chr7	+	979	5	FSM	ENSG00000106330.12	ENST00000462372.5	979	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	177.047133554881	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTACTTGCCCCTGT	-15	True	NA	31	True	AATAAA	-28	NA	100612157	100615384	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100612242_100612729_100612997_100613476_100613707_100614866_100615032_100615151
H1_mix_00080682	chr7	+	1105	6	NNC	ENSG00000106330.12	novel	1154	5	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_1	151.331424363878	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAAATGTAGGGTACTTG	-5	True	NA	24	True	AATAAA	-21	NA	100612461	100615377	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_100612603_100612729_100612997_100613193_100613270_100613476_100613707_100614866_100615032_100615151
H1_mix_00080683	chr7	+	1209	5	FSM	ENSG00000106330.12	ENST00000424091.2	1115	5	-94	0	32	0	multi-exon	FALSE	canonical	3	11	junction_2	177.973839369723	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTACTTGCCCCTGT	-5	True	NA	31	True	AATAAA	-28	NA	100612461	100615384	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100612997_100613193_100613270_100613506_100613707_100614866_100615032_100615151
H1_mix_00080685	chr7	+	1636	5	FSM	ENSG00000130427.3	ENST00000252723.3	1662	5	26	0	26	0	multi-exon	FALSE	canonical	1	2	junction_1	1.87082869338697	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGACTCTTGGCTTTTCTG	18	False	NA	4	True	NA	NA	NA	100720493	100723700	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100720994_100721557_100721704_100721961_100722049_100722663_100722844_100722977
H1_mix_00080686	chr7	+	3952	10	FSM	ENSG00000146828.18	ENST00000475687.5	4128	10	176	0	176	0	multi-exon	FALSE	canonical	3	56	junction_1	10.6353707556959	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCTGGCTGAGCAGTGC	2875	False	NA	13	True	AATAAA	-14	NA	100855616	100867009	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100857177_100858834_100858943_100859049_100859162_100859884_100860043_100860149_100860233_100861137_100861263_100861391_100861585_100861736_100861912_100862680_100862828_100865718
H1_mix_00080695	chr7	+	540	2	FSM	ENSG00000087087.20	ENST00000477529.1	540	2	0	0	0	0	multi-exon	FALSE	canonical	3	975	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTCTCGTGTGTTA	3042	False	NA	15	True	AATAAA	-16	NA	100888034	100888664	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100888384_100888473
H1_mix_00080696	chr7	+	434	2	FSM	ENSG00000169871.13	ENST00000467847.1	581	2	147	0	147	0	multi-exon	FALSE	canonical	3	30	junction_1	0	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCGAGGGTGTGGCCTCC	1444	False	NA	NA	False	NA	NA	NA	101086931	101087508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_101087169_101087311
H1_mix_00080698	chr7	+	394	1	FSM	ENSG00000278683.1	ENST00000611491.1	394	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAAGCTTAGCTTTTTCA	8819	False	NA	NA	False	NA	NA	NA	101273321	101273715	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_101273300_101273700
H1_mix_00080699	chr7	+	1087	4	Fusion	ENSG00000232445.2_ENSG00000232301.3	novel	1194	3	NA	NA	20	12425	multi-exon	TRUE	non_canonical	0	0	junction_3	217.726127661948	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGTGCAATCTCGGCTC	NA	False	NA	NA	False	NA	NA	NA	101299577	101327225	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_+_101299867_101308318_101308549_101310483_101311011_101327184
H1_mix_00080700	chr7	+	962	2	Fusion	ENSG00000288749.1_ENSG00000232301.3	novel	887	2	NA	NA	-83	1	multi-exon	FALSE	canonical	3	104	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTTTATGAGGTCGATTT	NA	False	NA	32	True	ATTAAA	-33	NA	101299474	101304579	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_+_101299867_101304009
H1_mix_00080703	chr7	+	1678	7	NNC	ENSG00000160999.11	novel	2236	9	NA	NA	-5	2873	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_5	62.0752231839188	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCAGTGGCCAGCCCTGA	-32	True	NA	NA	False	NA	NA	NA	102286862	102317420	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_102287095_102300521_102301280_102306720_102306823_102308814_102308907_102314335_102314428_102314514_102314683_102317186
H1_mix_00080704	chr7	+	1436	8	NIC	ENSG00000160999.11	novel	2236	9	NA	NA	41	-1	combination_of_known_splicesites	FALSE	canonical	3	8	junction_1	70.6217287485132	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCGGCTCTCCTGTCGTCC	14	True	NA	10	True	ATTAAA	-20	NA	102286908	102321710	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_102287095_102306720_102306823_102308814_102308907_102314335_102314428_102314511_102314683_102317186_102317396_102320330_102320503_102321298
H1_mix_00080705	chr7	+	1648	9	FSM	ENSG00000128563.13	ENST00000482549.5	1625	9	-23	0	0	0	multi-exon	TRUE	canonical	3	48	junction_4	69.0107555023128	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTTGTTGGGACATGTGG	NA	False	NA	34	True	AGTAAA	-17	NA	102363871	102425449	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_102364412_102365973_102366077_102375822_102375950_102376211_102376323_102397619_102397699_102399547_102399649_102404597_102404684_102407433_102407499_102425013
H1_mix_00080706	chr7	+	3723	10	NNC	ENSG00000128563.13	novel	3430	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_5	75.9592158275466	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGAAACCTGTTTTTC	NA	False	NA	10	True	AATAAA	-22	NA	102363871	102426666	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_102364412_102365973_102366077_102375822_102375950_102376211_102376323_102395976_102396835_102397619_102397699_102399547_102399649_102404597_102404684_102407433_102407499_102425013
H1_mix_00080708	chr7	+	1474	8	NIC	ENSG00000128563.13	novel	1642	9	NA	NA	43	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	81.7162836918577	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCGTTTTGTTGGGACATG	54	False	NA	31	True	AGTAAA	-14	NA	102363939	102425446	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_102364412_102375822_102375950_102376211_102376323_102397619_102397699_102399547_102399649_102404597_102404684_102407433_102407499_102425013
H1_mix_00080709	chr7	+	491	5	FSM	ENSG00000239969.6	ENST00000484974.5	491	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	39.2706951810125	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGGTCTCATCATTATC	276	False	NA	37	True	TATAAA	-40	NA	102364161	102380633	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_102364207_102366017_102366077_102375822_102375950_102376211_102376323_102380484
H1_mix_00080710	chr7	+	3136	10	NIC	ENSG00000128563.13	novel	3430	10	NA	NA	265	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_4	65.400381318026	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGAAACCTGTTTTTC	276	False	NA	10	True	AATAAA	-22	NA	102364161	102426666	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_102364412_102365973_102366077_102375822_102375950_102376211_102376323_102395976_102396538_102397619_102397699_102399547_102399649_102404597_102404684_102407433_102407499_102425013
H1_mix_00080712	chr7	+	10747	4	FSM	ENSG00000160991.17	ENST00000495936.7	10747	4	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_3	6.64997911442	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCCCATTTTTTTTTTTT	2	True	NA	NA	False	AATAAA	-19	NA	102433574	102456825	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_102433662_102436224_102436334_102438943_102439182_102446512
H1_mix_00080715	chr7	+	1807	1	NIC	ENSG00000173678.15	novel	3214	9	NA	NA	41	-6069	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTTATCCCAGCTACT	2088	False	NA	NA	False	AATATA	-44	NA	102652389	102654196	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_102652400_102654200
H1_mix_00080716	chr7	+	2230	8	FSM	ENSG00000222011.9	ENST00000442873.5	2217	8	-13	0	-13	0	multi-exon	FALSE	canonical	2	6	junction_1	13.7988464469066	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTACTGATTCTTAATA	NA	False	NA	15	True	AATAAA	-19	NA	102748957	102809225	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_102749637_102751691_102751802_102757853_102757947_102761272_102761412_102772408_102772451_102777252_102777349_102787334_102787470_102808289
H1_mix_00080717	chr7	+	1710	7	NIC	ENSG00000222011.9	novel	1958	8	NA	NA	183	3	combination_of_known_splicesites	FALSE	canonical	3	6	junction_4	14.147045235274	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACTGATTCTTAATATCT	201	False	NA	18	True	AATAAA	-22	NA	102749219	102809228	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_102749418_102751691_102751802_102757853_102757947_102761272_102761412_102777252_102777349_102787334_102787470_102808289
H1_mix_00080721	chr7	+	1615	2	FSM	ENSG00000105819.14	ENST00000469560.1	1615	2	0	0	0	0	multi-exon	FALSE	canonical	3	645	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTGGAAATTTGAATTAAA	5535	False	NA	-30	True	AATAAA	-18	NA	103310577	103312351	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_103311897_103312055
H1_mix_00080722	chr7	+	4001	11	FSM	ENSG00000161057.13	ENST00000677943.1	4040	11	39	0	39	0	multi-exon	FALSE	canonical	3	757	junction_8	91.1362167307816	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTACACATTTAGAACACA	567	False	NA	-6	True	ATTAAA	-4	NA	103352472	103369375	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_103353959_103354867_103354950_103355693_103355794_103361956_103362089_103362685_103362759_103363343_103363440_103364142_103364308_103366075_103366164_103367412_103367616_103367712_103367810_103367896
H1_mix_00080724	chr7	+	2233	14	NIC	ENSG00000005483.22	novel	2523	15	NA	NA	94	-122	combination_of_known_junctions	FALSE	canonical	3	60	junction_4	18.7919156733569	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATTGGTTGTTCATTA	29	False	NA	NA	False	AATAAA	-17	NA	105014311	105091487	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_105014536_105040838_105041024_105062163_105062279_105063350_105063581_105066726_105066808_105073618_105073678_105074642_105074816_105076042_105076082_105076962_105077194_105077302_105077434_105078845_105078964_105081687_105081798_105090008_105090274_105091215
H1_mix_00080729	chr7	+	430	1	FSM	ENSG00000223886.3	ENST00000493920.1	463	1	-84	117	-84	-117	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCATGAGCTGCCCACTGA	NA	False	NA	NA	False	NA	NA	NA	105530124	105530554	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_105530100_105530600
H1_mix_00080735	chr7	+	535	1	FSM	ENSG00000242562.1	ENST00000495256.1	1330	1	20	775	20	-775	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATCCTATAAGTTCAATG	NA	False	NA	NA	False	NA	NA	NA	106125390	106125925	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_106125400_106125900
H1_mix_00080736	chr7	+	572	4	FSM	ENSG00000105856.14	ENST00000478930.5	563	4	-9	0	-9	0	multi-exon	FALSE	canonical	2	5	junction_1	98.7803399242762	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGCATGTACCAGCTGA	853	False	NA	NA	False	NA	NA	NA	107168980	107182415	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_107169028_107174447_107174746_107179878_107180063_107182372
H1_mix_00080737	chr7	+	2739	8	FSM	ENSG00000105856.14	ENST00000498408.1	2332	8	0	-407	0	407	multi-exon	FALSE	canonical	3	188	junction_5	11.2503968183984	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTAATTTTTTGCATATTT	68	False	NA	NA	False	NA	NA	NA	107179917	107197529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_107180063_107182372_107182602_107185800_107185943_107186360_107186473_107186568_107186682_107189291_107189449_107190172_107190318_107195833
H1_mix_00080738	chr7	+	1610	7	FSM	ENSG00000105865.11	ENST00000422290.5	1610	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	24.8646335183127	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAGGAAATTCTGAATAGA	-15	True	NA	NA	False	AAAAAG	-40	NA	107563957	107578015	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_107564210_107564587_107564677_107567049_107567187_107571144_107571267_107575187_107575311_107576408_107576593_107577312
H1_mix_00080740	chr7	+	2057	1	FSM	ENSG00000238832.1	ENST00000459477.1	145	1	-510	-1402	-510	1402	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAACTCATGACCAAT	NA	False	NA	NA	False	AATATA	-30	NA	107602852	107604909	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_107602900_107604900
H1_mix_00080741	chr7	+	1151	1	FSM	ENSG00000250474.2	ENST00000515260.2	998	1	55	-208	55	208	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTGAGAAGTTGGTTCT	NA	False	NA	NA	False	NA	NA	NA	107628607	107629758	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_107628600_107629800
H1_mix_00080742	chr7	+	554	5	FSM	ENSG00000105879.12	ENST00000487517.1	560	5	-3	9	0	-9	multi-exon	FALSE	canonical	3	245	junction_1	58.6110057924278	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGCAGGAGATGAAACATAC	-5	True	NA	NA	False	ATTAAA	-22	NA	107744141	107755583	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_107744177_107748879_107749048_107753410_107753512_107753894_107753979_107755417
H1_mix_00080743	chr7	+	1506	6	FSM	ENSG00000105879.12	ENST00000420796.1	1506	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	149.274780187411	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCCACCAATGACCTCTG	290	False	NA	NA	False	NA	NA	NA	107744436	107758820	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_107744838_107748879_107749048_107753410_107753512_107753894_107753979_107755417_107755492_107758142
H1_mix_00080744	chr7	+	1812	15	FSM	ENSG00000091140.15	ENST00000417551.5	2041	15	-20	249	-18	-249	multi-exon	TRUE	canonical	1	1	junction_14	319.754856675152	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTTTGCTTCAGAGACC	-25	True	NA	NA	False	NA	NA	NA	107891143	107931481	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_107891290_107893199_107893279_107901737_107901818_107902324_107902394_107903477_107903548_107904957_107905059_107905360_107905505_107906266_107906369_107915505_107915697_107916793_107916965_107917272_107917463_107917923_107918062_107919009_107919100_107919193_107919384_107931430
H1_mix_00080748	chr7	+	637	3	FSM	ENSG00000091140.15	ENST00000489184.1	638	3	0	1	0	-1	multi-exon	FALSE	canonical	3	1149	junction_2	100.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTGTTGTCTTTCTGCC	NA	False	NA	NA	False	NA	NA	NA	107904667	107906368	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_107905059_107905360_107905505_107906266
H1_mix_00080749	chr7	+	2543	1	FSM	ENSG00000273055.1	ENST00000608515.1	625	1	-242	-1676	-242	1676	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACAACCAGTTCAGCCAA	6499	False	NA	NA	False	NA	NA	NA	107941873	107944416	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_107941900_107944400
H1_mix_00080751	chr7	+	2190	2	FSM	ENSG00000198839.10	ENST00000421043.5	2218	2	-2	30	0	-30	multi-exon	FALSE	canonical	3	116	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	-9	True	NA	NA	False	AATGAA	-27	NA	112206694	112288949	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_112206808_112286872
H1_mix_00080752	chr7	+	1742	12	FSM	ENSG00000198839.10	ENST00000361946.8	1736	12	-6	0	-6	0	multi-exon	FALSE	canonical	0	0	junction_1	38.2719714889747	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTCAGTCTCCTCCCCA	-15	True	NA	80	True	TATAAA	-18	NA	112206688	112343094	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_112206808_112286876_112287075_112295868_112295958_112296228_112296312_112318181_112318274_112327716_112327828_112330083_112330217_112336103_112336172_112337729_112337827_112339842_112339886_112340871_112341047_112342560
H1_mix_00080753	chr7	+	1917	4	FSM	ENSG00000006652.15	ENST00000429071.5	1938	4	2	19	0	-19	multi-exon	FALSE	canonical	3	243	junction_1	10.7082522694727	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAAAAAAAAAAATAAA	1	True	NA	NA	False	NA	NA	NA	112450459	112458317	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_112450783_112455762_112455868_112456001_112456087_112456913
H1_mix_00080755	chr7	+	2853	4	FSM	ENSG00000006652.15	ENST00000489994.5	1721	4	-83	-1049	-83	32	multi-exon	FALSE	canonical	3	283	junction_1	32.3831231765354	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCGCAGGCTGGGGTGC	3239	False	NA	53	True	NA	NA	NA	112467293	112477235	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_112468116_112472218_112472348_112472765_112472862_112475429
H1_mix_00080756	chr7	+	1276	9	FSM	ENSG00000128573.27	ENST00000360232.8	1412	9	2	134	0	-134	multi-exon	FALSE	canonical	2	5	junction_2	6.20483682299543	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGCATATTGCTTTAT	6502	False	NA	NA	False	NA	NA	NA	114426501	114654009	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_114426680_114534616_114534707_114628539_114628678_114629804_114630006_114631527_114631706_114642409_114642624_114644684_114644790_114652202_114652291_114653925
H1_mix_00080757	chr7	+	487	2	FSM	ENSG00000135272.13	ENST00000423503.1	474	2	-13	0	-13	0	multi-exon	FALSE	canonical	3	10	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTCCAAGAATGAATTAGC	236	False	NA	NA	False	AATAAA	-23	NA	114922840	114923658	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_114923128_114923458
H1_mix_00080758	chr7	+	869	3	FSM	ENSG00000135269.18	ENST00000461440.5	873	3	4	0	4	0	multi-exon	FALSE	canonical	3	198	junction_2	28.5	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATCTTAAGATGGTAAAG	-28	True	NA	NA	False	NA	NA	NA	116210509	116249577	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_116210735_116234533_116234620_116249019
H1_mix_00080759	chr7	+	983	2	FSM	ENSG00000135269.18	ENST00000496871.1	961	2	-22	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTAATAAAAATGTTCCTG	1	True	NA	NA	False	ATTAAA	-25	NA	116210538	116249806	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_116210735_116249019
H1_mix_00080764	chr7	+	2480	3	FSM	ENSG00000105974.13	ENST00000341049.7	2456	3	-24	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	49.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCAGCTTTATTATTTTT	11	True	NA	16	True	AATAAA	-18	NA	116525011	116561179	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_116525093_116526524_116526690_116558945
H1_mix_00080771	chr7	+	1957	14	NIC	ENSG00000004866.22	novel	1689	14	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_13	34.3139007835345	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTATCCTCCTGTGT	-1	True	NA	-65	True	AATAAA	-21	NA	116953330	117230103	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_116953692_117099761_117099845_117119560_117119721_117129792_117129848_117130490_117130607_117131884_117131961_117134123_117134193_117136080_117136236_117138434_117138533_117170861_117170977_117189320_117189394_117190833_117190937_117209786_117209938_117229761
H1_mix_00080777	chr7	+	396	3	Intergenic	novelGene_1400	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	11.5	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTGACTGCTTTTTCAG	NA	False	NA	NA	False	AATGAA	-13	NA	121621154	121754132	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_121621462_121626794_121626823_121754071
H1_mix_00080778	chr7	+	3671	4	NNC	ENSG00000106278.12	novel	7839	31	NA	NA	-206	-54991	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	6.59966329107444	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTCCAGTGTATGAAAC	NA	False	NA	NA	False	AATAAA	-15	NA	121872882	121912032	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_121873558_121893523_121893627_121905856_121905928_121909210
H1_mix_00080779	chr7	+	5581	30	NIC	ENSG00000106278.12	novel	8103	30	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	116	junction_12	111.269145902916	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTGCTTGTGGAGC	7	False	NA	17	True	AATAAA	-19	NA	121873102	122062036	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_121873558_121928155_121928222_121967950_121968131_121972540_121972693_121976172_121976269_121976784_121976852_121983664_121983823_121983966_121984118_121996381_121996567_121997879_121998007_122004613_122004661_122010333_122011310_122019123_122019269_122028551_122028644_122031473_122031560_122034094_122034116_122034281_122034379_122036599_122036683_122038754_122038890_122039453_122039589_122040815_122040980_122042607_122042744_122044421_122044569_122051427_122051522_122051865_122051940_122053909_122054039_122054940_122055088_122058799_122058943_122059752_122059889_122061079
H1_mix_00080781	chr7	+	7840	31	FSM	ENSG00000106278.12	ENST00000651863.1	7840	31	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_23	134.392232745134	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCATTAGCTGGTCTTAC	-14	True	NA	NA	False	NA	NA	NA	121873326	122061822	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_121873558_121928155_121928222_121967950_121968131_121972540_121972693_121976172_121976269_121976784_121976852_121983664_121983823_121983966_121984118_121996381_121996567_121997879_121998007_122004613_122004661_122010333_122013890_122019123_122019269_122028551_122028644_122031473_122031560_122034094_122034116_122034281_122034379_122036599_122036683_122038754_122038890_122039453_122039589_122040815_122040980_122042607_122042744_122044421_122044569_122047673_122047791_122051427_122051522_122051865_122051940_122053909_122054039_122054940_122055088_122058799_122058943_122059752_122059889_122061079
H1_mix_00080786	chr7	+	1122	2	NNC	ENSG00000234418.3	novel	1460	5	NA	NA	3	-37665	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGAGCTCTGTTTTCACTC	-10	True	NA	NA	False	NA	NA	NA	122144415	122177100	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_122144497_122176059
H1_mix_00080787	chr7	+	832	2	FSM	ENSG00000234418.3	ENST00000654647.1	1305	2	77	396	77	-46	multi-exon	FALSE	canonical	2	5	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATATTCAATTAAGTGTT	NA	False	NA	NA	False	NA	NA	NA	122216935	122218880	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_122217029_122218141
H1_mix_00080789	chr7	+	679	2	FSM	ENSG00000230316.8	ENST00000424404.1	679	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAATAAGATAATAGAGCCA	547	False	NA	NA	False	AATAAA	-3	NA	122306880	122308557	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_122307489_122308486
H1_mix_00080790	chr7	+	846	6	FSM	ENSG00000224897.9	ENST00000663263.1	857	6	0	11	0	-11	multi-exon	FALSE	canonical	0	0	junction_4	4.38178046004133	401	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAATTTTGGATATAAA	15	True	NA	NA	False	AAAACA	-18	NA	124929928	125143096	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_124930017_124940279_124940386_125020332_125020414_125080711_125080814_125138572_125138660_125142714
H1_mix_00080791	chr7	+	215	1	Intergenic	novelGene_1402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCAACTCTGGTGCCAAC	NA	False	NA	NA	False	NA	NA	NA	125912452	125912667	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_125912500_125912700
H1_mix_00080792	chr7	+	6054	2	NNC	ENSG00000197462.3	novel	837	5	NA	NA	-136	-3639	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	0	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTTCCTTTGTATAGT	NA	False	NA	13	True	AATAAA	-19	NA	125917734	125930193	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_125917807_125924211
H1_mix_00080794	chr7	+	2413	4	NNC	ENSG00000197462.3	novel	837	5	NA	NA	-137	-3599	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.7451088722749	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTCCACAACTGATGTTG	NA	False	NA	53	True	NA	NA	NA	125917733	125930233	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_125918119_125923681_125924046_125924211_125924388_125928745
H1_mix_00080795	chr7	+	2136	4	NNC	ENSG00000197462.3	novel	837	5	NA	NA	4	-3640	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	16.739839372653	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGTTCCTTTGTATAG	11	False	NA	12	True	AATAAA	-18	NA	125917874	125930192	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_125918119_125923681_125923951_125924211_125924388_125928745
H1_mix_00080796	chr7	+	1868	3	NNC	ENSG00000197462.3	novel	837	5	NA	NA	4	-3639	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_2	18.5	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTTCCTTTGTATAGT	11	False	NA	13	True	AATAAA	-19	NA	125917874	125930193	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_125918119_125924211_125924388_125928745
H1_mix_00080797	chr7	+	927	3	NIC	ENSG00000197462.3	novel	837	5	NA	NA	4	448	combination_of_known_splicesites	FALSE	canonical	3	34	junction_2	22	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAGAAGAGAGGGAGAATT	11	False	NA	5	True	AATAAA	-25	NA	125917874	125934280	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_125918119_125924211_125924388_125933773
H1_mix_00080798	chr7	+	3055	1	FSM	ENSG00000279078.1	ENST00000623342.1	2481	1	-553	-21	-553	21	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGGAAGCTAATATTTTTA	NA	False	NA	NA	False	NA	NA	NA	127997043	128000098	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_127997000_128000100
H1_mix_00080800	chr7	+	1583	8	FSM	ENSG00000165055.16	ENST00000482555.5	1590	8	7	0	7	0	multi-exon	TRUE	canonical	3	70	junction_5	105.146739058774	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTCTCGTTGATGCTGG	NA	False	NA	0	True	AATAAA	-12	NA	128476735	128502126	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_128477174_128479157_128479514_128480646_128480697_128488100_128488162_128493803_128493944_128498035_128498143_128500902_128500969_128501761
H1_mix_00080802	chr7	+	3801	23	Fusion	ENSG00000243302.3_ENSG00000242588.6	novel	1552	13	NA	NA	-43391	-685	multi-exon	FALSE	canonical	2	3	junction_5	7.40727808274007	191	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCTCTTTAGGCCAAGCT	9	True	NA	NA	False	NA	NA	NA	128531359	128651649	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_+_128531801_128533644_128533731_128574719_128574792_128577952_128578034_128578889_128578934_128591849_128592018_128608117_128608214_128609486_128609580_128615859_128615971_128617867_128617978_128619045_128619178_128622478_128622695_128623574_128623782_128625796_128625856_128626294_128626531_128629393_128629459_128631679_128631870_128638773_128638898_128640884_128641380_128642216_128642282_128648791_128648983_128651037_128651096_128651188
H1_mix_00080803	chr7	+	1150	1	FSM	ENSG00000243302.3	ENST00000465971.1	1150	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGACTGTCGGGCCATTT	NA	False	NA	NA	False	NA	NA	NA	128651184	128652334	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_128651200_128652300
H1_mix_00080804	chr7	+	1104	2	Genic_Genomic	ENSG00000243679.1_ENSG00000243302.3	novel	754	1	NA	NA	601	302	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTTATTTTCCTTAT	NA	False	NA	-71	True	NA	NA	NA	128651785	128655024	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr7_+_128651936_128654070
H1_mix_00080805	chr7	+	2323	1	FSM	ENSG00000271553.1	ENST00000605836.1	1114	1	-1215	6	-1215	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCACTTGGGGTCATGCT	4702	False	NA	NA	False	AATAAA	-22	NA	128665827	128668150	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_128665800_128668200
H1_mix_00080806	chr7	+	1574	8	FSM	ENSG00000135248.16	ENST00000485070.5	1574	8	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_2	8.64728340024089	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGAAATGTTTTCT	-3	True	NA	NA	False	AGTAAA	-10	NA	128709060	128731611	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_128709208_128713922_128714133_128716812_128716998_128718891_128719084_128723196_128723319_128726833_128726872_128729901_128730070_128731099
H1_mix_00080809	chr7	+	8585	13	NIC	ENSG00000128596.17	novel	4246	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	21	junction_11	18.5627688906825	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACATGAGACTGTGGATTT	26	True	NA	NA	False	ATTAAA	-12	NA	128791457	128822125	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_128791552_128792319_128792428_128794347_128794603_128794693_128794769_128801185_128801510_128804649_128804762_128805358_128805525_128805760_128805902_128806236_128806396_128806687_128806859_128807359_128807546_128814637_128814920_128815613
H1_mix_00080811	chr7	+	655	3	NNC	ENSG00000128524.5	novel	711	3	NA	NA	0	31068	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	883.5	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTTCTCTACCGATACA	34	False	NA	NA	False	NA	NA	NA	128862903	128896915	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_128863063_128865376_128865845_128896887
H1_mix_00080813	chr7	+	2523	4	ISM	ENSG00000128602.11	ENST00000475779.1	582	5	-295	-1393	-295	0	intron_retention	FALSE	canonical	2	3	junction_2	59.8906410792946	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGTGTGTTTTTCCTT	NA	False	NA	15	True	AATAAA	-16	NA	129210212	129213545	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_129210549_129210964_129211114_129211382_129211511_129211635
H1_mix_00080816	chr7	+	289	1	FSM	ENSG00000199846.1	ENST00000362976.1	153	1	-148	12	-148	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTGTCTTTTCACTAAAAA	NA	False	NA	NA	False	NA	NA	NA	129484355	129484644	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_129484400_129484600
H1_mix_00080819	chr7	+	491	3	FSM	ENSG00000128607.14	ENST00000463413.1	503	3	12	0	12	0	multi-exon	FALSE	canonical	3	12	junction_1	11.5	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAGTATTTGGAGGTACG	5	True	NA	NA	False	NA	NA	NA	130070561	130120769	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_130070810_130116444_130116667_130120748
H1_mix_00080820	chr7	+	2311	11	FSM	ENSG00000106484.16	ENST00000416162.7	2337	11	26	0	26	0	multi-exon	TRUE	canonical	3	253	junction_8	521.849748490885	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGACTCTGGCTTCCCCTC	NA	False	NA	16	True	AATAAA	-18	NA	130486200	130506292	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_130486396_130495367_130495523_130497155_130497236_130497935_130498014_130498138_130498276_130498418_130498478_130499874_130499916_130500461_130500533_130502643_130502721_130503932_130503997_130504938
H1_mix_00080823	chr7	+	623	1	FSM	ENSG00000270953.1	ENST00000604965.1	623	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTCATTATTTTCATCT	1655	False	NA	NA	False	AATAAA	-18	NA	130507659	130508282	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_130507700_130508300
H1_mix_00080825	chr7	+	2675	15	FSM	ENSG00000122786.20	ENST00000422748.5	2665	15	-10	0	-10	0	multi-exon	FALSE	canonical	3	61	junction_10	282.198701525817	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAATGTA	NA	False	NA	85	True	NA	NA	NA	134779409	134968859	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_134779750_134843883_134843972_134867692_134867805_134928753_134928901_134932987_134933391_134935687_134935766_134941091_134941238_134947507_134947770_134950373_134950515_134958068_134958113_134958211_134958291_134959973_134960112_134960532_134960629_134965305_134965387_134968339
H1_mix_00080826	chr7	+	2615	11	FSM	ENSG00000122786.20	ENST00000482470.5	3941	11	-16	1342	0	991	multi-exon	FALSE	canonical	3	299	junction_3	191.180255256656	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATATGTTCCAATTTGCCT	-11	True	NA	NA	False	NA	NA	NA	134779633	134961047	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_134779750_134843883_134843972_134867692_134867805_134928753_134928901_134932987_134933391_134941091_134941238_134947507_134947770_134950373_134950515_134958068_134958113_134958208_134958291_134959973
H1_mix_00080827	chr7	+	4026	14	NIC	ENSG00000122786.20	novel	4114	14	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	3	79	junction_13	226.348424928153	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTATTTCAGGTTGAGTC	-11	True	NA	7	True	AATAAA	-19	NA	134779633	134970723	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_134779750_134843883_134843972_134867692_134867805_134928753_134928901_134932987_134933391_134941091_134941238_134947507_134947770_134950373_134950515_134958068_134958113_134958208_134958291_134959973_134960112_134960532_134960629_134965305_134965387_134968553
H1_mix_00080830	chr7	+	529	1	FSM	ENSG00000227073.1	ENST00000436937.1	465	1	-25	-39	-25	39	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCCTCTTTGCCTCTGCT	NA	False	NA	NA	False	NA	NA	NA	135444435	135444964	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_135444400_135445000
H1_mix_00080831	chr7	+	658	2	Antisense	novelGene_ENSG00000146858.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	200	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGCTTCTACTTTCCT	546	False	NA	16	True	AATAAA	-18	NA	139036011	139036950	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr7_+_139036372_139036652
H1_mix_00080832	chr7	+	2769	18	FSM	ENSG00000105948.13	ENST00000476296.1	2756	18	-13	0	-1	0	multi-exon	FALSE	canonical	2	3	junction_5	18.9329540063046	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTACAGTGGTGCGATC	3	True	NA	NA	False	NA	NA	NA	139133774	139190292	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_139133861_139134654_139134793_139137846_139137940_139139889_139140005_139142255_139142306_139146983_139147291_139148205_139148378_139160947_139161023_139165131_139165235_139166839_139166896_139168343_139168398_139169288_139169353_139178213_139178303_139178514_139178599_139179573_139179644_139181091_139181199_139187405_139187540_139189320
H1_mix_00080834	chr7	+	10451	1	NIC	ENSG00000157741.15	novel	14692	18	NA	NA	4159	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCGTGTCTGTTGTGTTA	5119	False	NA	18	True	AATAAA	-18	NA	139297785	139308236	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_139297800_139308200
H1_mix_00080835	chr7	+	584	2	FSM	ENSG00000146963.18	ENST00000435096.1	570	2	-14	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTTATTATAGTAGCAG	-34	True	NA	NA	False	AAAAAG	-13	NA	139359893	139374555	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_139360323_139374400
H1_mix_00080836	chr7	+	3466	9	ISM	ENSG00000146963.18	ENST00000354926.9	2661	10	8	3620	-6	-2677	5prime_fragment	FALSE	canonical	3	668	junction_8	58.0339340386295	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTCATCTTTGAATTCA	-26	True	NA	27	True	ATTAAA	-21	NA	139359901	139419834	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_139360323_139376061_139376157_139398598_139398698_139402136_139402248_139405643_139405788_139407173_139407351_139409562_139409655_139412550_139412581_139417537
H1_mix_00080839	chr7	+	324	4	FSM	ENSG00000236279.7	ENST00000521281.1	324	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.29983164553722	219	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGTGTGTCTTCGTGGAG	120	False	NA	NA	False	NA	NA	NA	139524081	139544250	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_139524118_139540320_139540488_139542020_139542122_139544230
H1_mix_00080840	chr7	+	239	1	FSM	ENSG00000254270.1	ENST00000523006.1	310	1	-11	82	-11	-82	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGACATACCAGCCTTATAA	17	False	NA	NA	False	NA	NA	NA	139534228	139534467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_139534200_139534500
H1_mix_00080843	chr7	+	2457	1	FSM	ENSG00000260231.2	ENST00000566699.2	2457	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTCTCAGATATTTTTC	27	True	NA	NA	False	ATTAAA	-21	NA	140177183	140179640	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_140177200_140179600
H1_mix_00080846	chr7	+	7759	1	ISM	ENSG00000261115.7	ENST00000565468.6	10726	4	398555	3	398226	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGATTGTGTCTGCTTAG	NA	False	NA	25	True	AATAAA	-22	NA	141472618	141480377	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_141472600_141480400
H1_mix_00080850	chr7	+	993	7	FSM	ENSG00000106028.11	ENST00000481508.1	989	7	-4	0	0	0	multi-exon	FALSE	canonical	2	24	junction_1	1503.71436412933	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTAATAATCTTTTTTCT	5	False	NA	17	True	ATTAAA	-19	NA	141738602	141750461	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_141738999_141739123_141739191_141742168_141742230_141743560_141743702_141743901_141743990_141745495_141745585_141750310
H1_mix_00080852	chr7	+	3880	19	FSM	ENSG00000106123.12	ENST00000614832.4	3861	19	-19	0	0	0	multi-exon	TRUE	canonical	1	2	junction_5	41.5957915725042	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCAGGTTTGGTGTGGTG	23	True	NA	12	True	ATTAAA	-15	NA	142855123	142871087	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_142855386_142861051_142861187_142862016_142862134_142862755_142862834_142863126_142863328_142863965_142864750_142865474_142865631_142865959_142866317_142866480_142866606_142866905_142867069_142867607_142867723_142867996_142868050_142868240_142868361_142868491_142868740_142868973_142869148_142869816_142869967_142870213_142870408_142870529_142870686_142870795
H1_mix_00080853	chr7	+	4409	18	FSM	ENSG00000106123.12	ENST00000616380.4	4409	18	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_3	25.6112810351801	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTGTGGTGAGGCCTC	23	True	NA	19	True	ATTAAA	-22	NA	142855123	142871094	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_142855386_142861051_142861187_142862016_142862134_142862755_142863328_142863630_142863696_142863965_142864750_142865474_142865631_142865959_142866606_142866905_142867069_142867607_142867723_142867996_142868050_142868240_142868361_142868491_142868740_142868973_142869148_142869816_142869967_142870213_142870408_142870529_142870686_142870795
H1_mix_00080854	chr7	+	2299	7	FSM	ENSG00000106123.12	ENST00000486511.5	2300	7	0	1	0	0	multi-exon	FALSE	canonical	3	143	junction_1	17.8418982547635	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGGTGTGGTGAGGCCT	1078	False	NA	18	True	ATTAAA	-21	NA	142867281	142871093	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_142868361_142868491_142868740_142868973_142869148_142869816_142869967_142870213_142870408_142870529_142870686_142870795
H1_mix_00080856	chr7	+	4055	11	NIC	ENSG00000106144.20	novel	2166	12	NA	NA	-76	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	21.4403824592753	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGCTCAATATCTGTTT	55	False	NA	20	True	AATAAA	-20	NA	143289511	143307696	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_143289657_143291539_143291691_143292299_143292468_143292616_143292699_143294229_143294325_143294596_143294774_143299922_143300052_143300203_143300295_143303783_143303934_143304673_143304784_143304939
H1_mix_00080857	chr7	+	655	1	FSM	ENSG00000240322.3	ENST00000477764.3	299	1	-82	-274	-82	274	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGGGACTATAAGCATGC	8977	False	NA	NA	False	NA	NA	NA	143298433	143299088	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_143298400_143299100
H1_mix_00080858	chr7	+	684	3	Genic_Genomic	ENSG00000272619.1	novel	331	1	NA	NA	-2058	70	multi-exon	FALSE	canonical	1	6	junction_1	4.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAACAAACAGCTTCCAT	132	False	NA	NA	False	ATTAAA	-9	NA	143361840	143364299	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr7_+_143362058_143363189_143363258_143363900
H1_mix_00080859	chr7	+	719	3	FSM	ENSG00000159840.16	ENST00000457235.5	703	3	-16	0	0	0	multi-exon	FALSE	canonical	3	1100	junction_2	16	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCCGGGTAAGGGACCG	21	True	NA	NA	False	NA	NA	NA	143381344	143382676	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_143381780_143382247_143382448_143382592
H1_mix_00080860	chr7	+	560	2	FSM	ENSG00000159840.16	ENST00000497119.1	560	2	0	0	0	0	multi-exon	FALSE	canonical	3	1083	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCAGGGCCAGCAGTTCT	1600	False	NA	NA	False	NA	NA	NA	143387888	143388597	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_143388340_143388488
H1_mix_00080861	chr7	+	484	3	FSM	ENSG00000229153.6	ENST00000421648.2	516	3	29	3	20	0	multi-exon	FALSE	canonical	3	8	junction_1	10	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTGATTTCTTGAGT	16	False	NA	8	True	AATAAA	-23	NA	143407832	143415830	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_143407891_143415067_143415200_143415536
H1_mix_00080862	chr7	+	3700	7	NNC	ENSG00000223459.6	novel	2233	7	NA	NA	-2	4489	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_6	50.0513625078168	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGGAAAATTTTTGTACC	NA	False	NA	NA	False	NA	NA	NA	143598036	143609328	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_143599034_143599321_143599420_143600526_143600741_143601387_143601628_143602773_143603112_143604584_143604862_143607792
H1_mix_00080867	chr7	+	587	5	NIC	ENSG00000244198.7	novel	423	5	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_2	24.2937749228069	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTACCCAGTCTGTGATA	NA	False	NA	NA	False	AATAAA	-15	NA	144195834	144243831	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_144196058_144207692_144207805_144239042_144239096_144239274_144239389_144243746
H1_mix_00080870	chr7	+	4655	1	FSM	ENSG00000228960.6	ENST00000461471.1	2913	1	-1739	-3	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTCCCGGGTGGTTCTT	NA	False	NA	NA	False	ATTAAA	-21	NA	144296279	144300934	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_144296300_144300900
H1_mix_00080871	chr7	+	5726	11	NNC	ENSG00000050327.15	novel	2968	13	NA	NA	-3061	-3786	intron_retention	FALSE	canonical	2	10	junction_1	52.2203025651901	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAAAAGCCTGTAGCTGT	6442	False	NA	NA	False	TATAAA	-31	NA	144361847	144376270	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_144361883_144362657_144365824_144366354_144366413_144366845_144366911_144367101_144367356_144371160_144371322_144371876_144372030_144372298_144372429_144372682_144372758_144373194_144373285_144374731
H1_mix_00080878	chr7	+	5014	5	NNC	ENSG00000244560.7	novel	1494	6	NA	NA	-3	-1	intron_retention	FALSE	canonical	0	0	junction_2	15.2561463023924	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCCATTCTCAATTTTAAT	-4	True	NA	9	True	AATAAA	-17	NA	149285277	149297301	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_149285956_149287564_149287777_149289937_149290039_149292210_149292309_149293376
H1_mix_00080880	chr7	+	3763	17	FSM	ENSG00000133619.18	ENST00000496259.6	3827	17	60	4	-46	0	multi-exon	FALSE	canonical	3	16	junction_1	13.5271717295228	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGCCCTGACTCCTATA	-8	True	NA	16	True	ATTAAA	-16	NA	149715010	149734571	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_149715067_149719545_149719673_149720007_149720128_149720834_149720991_149721382_149721536_149722421_149722554_149722782_149722957_149723733_149723890_149724651_149724850_149725314_149725489_149725886_149726061_149728522_149728676_149729187_149729371_149730146_149730342_149730427_149730569_149731671_149731777_149733205
H1_mix_00080881	chr7	+	5470	15	NNC	ENSG00000133619.18	novel	3827	17	NA	NA	-886	0	intron_retention	FALSE	canonical	2	4	junction_13	15.4688627340769	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGCCCTGACTCCTATA	3517	False	NA	16	True	ATTAAA	-16	NA	149718535	149734571	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_149719673_149720007_149720128_149720834_149720991_149721382_149721536_149722421_149722554_149722782_149722957_149723733_149723890_149724651_149724850_149725314_149725489_149725886_149726061_149728522_149728676_149729187_149730342_149730427_149730546_149731671_149731777_149733205
H1_mix_00080900	chr7	+	1888	9	NIC	ENSG00000133612.19	novel	2730	16	NA	NA	11	-3	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	58.2666285278289	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTCGTGGTCTCAGTTC	8	True	NA	21	True	AATAAA	-9	NA	151085877	151123632	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_151086061_151116792_151116852_151117094_151117183_151117370_151117457_151117635_151117778_151118209_151118345_151118504_151118633_151119986_151120146_151122724
H1_mix_00080901	chr7	+	4456	16	NNC	ENSG00000133612.19	novel	1707	7	NA	NA	669	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	45.8228472853154	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTTGTTTCCCCCTTTT	763	False	NA	21	True	AATAAA	-15	NA	151090380	151144432	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_151092252_151116792_151116852_151117094_151117183_151117370_151117457_151117635_151117778_151118209_151118345_151118504_151118633_151119986_151120146_151123793_151123887_151128579_151128685_151134399_151134569_151141897_151142053_151142162_151142254_151142411_151142635_151143340_151143597_151143736
H1_mix_00080904	chr7	+	422	2	FSM	ENSG00000133612.19	ENST00000467250.1	422	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTAATTGATGGCTCCAT	153	False	NA	18	True	NA	NA	NA	151134481	151136560	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_151134569_151136225
H1_mix_00080905	chr7	+	3748	5	FSM	ENSG00000133612.19	ENST00000473633.1	3751	5	3	0	3	0	multi-exon	FALSE	canonical	3	110	junction_4	4.63680924774785	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTTGTTTCCCCCTTTT	5242	False	NA	21	True	AATAAA	-15	NA	151139570	151144432	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_151142053_151142162_151142254_151142411_151142635_151143340_151143597_151143736
H1_mix_00080906	chr7	+	3756	3	FSM	ENSG00000033100.17	ENST00000692651.1	2795	3	-824	-137	40	-1	multi-exon	FALSE	canonical	3	11	junction_2	59	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACTGTTTTTAGGTCTAG	30	True	NA	22	True	ATTAAA	-13	NA	151232528	151238818	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_151234275_151235047_151235613_151237373
H1_mix_00080908	chr7	+	1742	14	NIC	ENSG00000013374.17	novel	3107	15	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_10	119.944760461348	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGCAGCTCTTTCTGT	19	True	NA	11	True	TATAAA	-19	NA	151341815	151377281	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_151341847_151345347_151345467_151349072_151349241_151351423_151351483_151352811_151352883_151355767_151355951_151356127_151356223_151360140_151360248_151366938_151367126_151367860_151367969_151374096_151374202_151375847_151375944_151376633_151376812_151377046
H1_mix_00080909	chr7	+	3042	15	NIC	ENSG00000013374.17	novel	3107	15	NA	NA	15	-6	combination_of_known_junctions	FALSE	canonical	2	2	junction_5	145.13176630854	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAATTGTCACCCTAATT	30	True	NA	10	True	AATAAA	-17	NA	151341826	151378443	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_151341847_151345347_151345467_151349072_151349241_151351423_151351483_151352092_151352194_151352811_151352883_151355767_151355951_151356127_151356223_151360140_151360248_151366938_151367126_151367860_151367969_151368734_151368888_151375847_151375944_151376633_151376812_151377046
H1_mix_00080911	chr7	+	580	3	FSM	ENSG00000178234.13	ENST00000482812.1	580	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAGGAATGCTGCACCTG	-34	True	NA	NA	False	NA	NA	NA	152025673	152103277	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_152025885_152094319_152094523_152103111
H1_mix_00080925	chr7	+	1677	9	FSM	ENSG00000105982.17	ENST00000317955.10	1679	9	0	2	0	-2	multi-exon	FALSE	canonical	0	0	junction_1	7.0178344238091	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGCAAATTTTAATGTCT	-10	True	NA	NA	False	AATAAA	-40	NA	156640773	156677128	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_156640812_156643800_156643893_156644498_156644758_156654575_156654719_156657540_156657574_156658127_156658253_156658461_156658571_156675695_156675864_156676418
H1_mix_00080933	chr7	+	2766	20	FSM	ENSG00000126870.16	ENST00000444851.5	2769	20	0	3	0	-3	multi-exon	FALSE	canonical	1	1	junction_11	24.4087991036882	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGACCTCTGCCAATAGT	78	False	NA	4	True	ATTAAA	-17	NA	158879779	158946186	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_158879990_158884563_158884620_158887020_158887076_158891264_158891334_158901738_158901817_158902375_158902596_158905988_158906092_158911549_158911680_158912984_158913097_158914232_158914322_158918739_158918870_158923570_158923734_158926186_158926301_158926401_158926464_158926991_158927044_158930454_158930516_158934128_158934229_158934417_158934550_158941924_158942149_158945580
H1_mix_00080934	chr7	+	5410	20	FSM	ENSG00000126870.16	ENST00000467220.1	5410	20	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	20.6734269466253	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTCTGCCAATAGTGTT	4872	False	NA	7	True	ATTAAA	-20	NA	158884573	158946189	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_158884620_158887020_158887076_158891264_158891334_158901738_158901817_158902375_158905284_158905988_158906092_158911549_158911680_158912984_158913097_158914232_158914322_158918739_158918870_158922376_158922550_158923570_158923734_158926186_158926301_158926401_158926464_158926991_158927044_158930454_158930516_158934128_158934229_158934417_158934550_158941924_158942149_158945580
H1_mix_00080937	chr7	-	1143	3	FSM	ENSG00000242474.3	ENST00000655134.1	1127	3	-16	0	-16	0	multi-exon	FALSE	canonical	3	7	junction_1	4	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGCTGTCATTTCAGGT	NA	False	NA	-16	True	AATAAA	-13	NA	149184	144443	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_144812_145293_145416_148531
H1_mix_00080938	chr7	-	618	1	ISM	ENSG00000197461.13	ENST00000402802.7	2305	6	21534	0	15592	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTGGACGTGAGAAGCGT	62	False	NA	-14	True	ATTAAA	-23	NA	497875	497257	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_497300_497900
H1_mix_00080939	chr7	-	2609	11	FSM	ENSG00000188191.15	ENST00000544935.5	2494	11	-88	-27	41	27	multi-exon	FALSE	canonical	2	3	junction_10	147.808795408122	6571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTCTTTTGTAGATAAG	183	False	NA	-14	True	ATTAAA	-43	NA	713028	549169	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_550603_551388_551471_579255_579378_584507_584569_596145_596305_606192_606240_607390_607453_677228_677321_680555_680727_711328_711528_712847
H1_mix_00080944	chr7	-	549	2	FSM	ENSG00000178381.12	ENST00000471448.2	544	2	-6	1	-6	0	multi-exon	FALSE	canonical	3	138	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAGTTGTTCTCATTGCC	5085	False	NA	-4	True	AATAAA	-19	NA	1155683	1152906	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_1153225_1155452
H1_mix_00080945	chr7	-	918	5	FSM	ENSG00000178381.12	ENST00000397083.6	853	5	-66	1	0	0	multi-exon	FALSE	canonical	1	3	junction_1	66.5934493775476	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAGTTGTTCTCATTGCC	0	True	NA	-4	True	AATAAA	-19	NA	1160219	1152906	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_1153242_1155452_1155585_1157655_1157751_1158157_1158258_1159963
H1_mix_00080949	chr7	-	632	5	FSM	ENSG00000164855.16	ENST00000474813.5	1008	5	0	376	0	44	multi-exon	FALSE	canonical	2	3	junction_1	2.38484800354236	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGCGGGAGCTGCGGGG	19	True	NA	NA	False	NA	NA	NA	1555472	1549853	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_1549946_1550122_1550199_1550304_1550396_1550816_1550983_1555265
H1_mix_00080950	chr7	-	527	4	FSM	ENSG00000164855.16	ENST00000414730.5	574	4	47	0	-12	0	multi-exon	FALSE	canonical	2	4	junction_1	2.05480466765633	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGTTCCTGCGCTTCTGTA	7	True	NA	NA	False	NA	NA	NA	1555484	1550147	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_1550199_1550304_1550396_1550816_1550983_1555265
H1_mix_00080953	chr7	-	3006	19	FSM	ENSG00000002822.16	ENST00000406869.5	2991	19	0	-15	0	14	multi-exon	FALSE	canonical	3	20	junction_18	53.9619207301676	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTATCTGTGGCCTAGCCC	8949	False	NA	5	True	AATAAA	-32	NA	2233243	1815778	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_1816229_1898199_1898391_1936686_1936898_1957628_1957720_1980452_1980542_2002064_2002122_2014501_2014643_2069193_2069339_2149151_2149239_2213211_2213274_2215884_2216000_2216156_2216288_2217961_2218044_2219331_2219457_2222574_2222755_2225409_2225551_2229983_2230144_2230548_2230725_2232871
H1_mix_00080957	chr7	-	1439	11	NNC	ENSG00000106266.11	novel	4704	11	NA	NA	34	42	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	50.0195961599052	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCCGGTGTAATTCCCTT	1	True	NA	0	True	ACTAAA	-19	NA	2314407	2254997	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_2255170_2256873_2257021_2257364_2257515_2257734_2257804_2263229_2263363_2264297_2264459_2269558_2269640_2271849_2271972_2275111_2275230_2278099_2278306_2314327
H1_mix_00080958	chr7	-	5360	3	FSM	ENSG00000106009.16	ENST00000493232.5	5360	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	315.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAATGGCATTGAAGT	NA	False	NA	-33	True	ATTAAA	-21	NA	2544252	2537880	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_2538765_2539543_2541485_2541717
H1_mix_00080959	chr7	-	2705	14	NNC	ENSG00000106009.16	novel	2779	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	93	junction_11	182.385669788991	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAATGGCATTGAAGT	-11	True	NA	-33	True	ATTAAA	-21	NA	2555524	2537880	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_2538765_2539178_2539352_2539543_2539643_2539785_2539889_2540978_2541053_2541297_2541485_2541717_2541837_2542119_2542212_2543203_2543324_2543589_2543963_2544908_2545054_2547323_2547479_2554304_2554448_2555486
H1_mix_00080960	chr7	-	3894	14	NNC	ENSG00000106009.16	novel	2779	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	32	junction_1	247.889696791028	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAATGGCATTGAAGT	-11	True	NA	-33	True	ATTAAA	-21	NA	2555524	2537880	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_2538945_2539178_2539352_2539543_2539643_2539785_2540895_2540978_2541053_2541297_2541485_2541717_2541837_2542119_2542212_2543203_2543324_2543589_2543963_2544908_2545057_2547323_2547479_2554304_2554448_2555486
H1_mix_00080962	chr7	-	1606	3	Antisense	novelGene_ENSG00000174945.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	1	24	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCATTTTGGGAGACTTC	6595	False	NA	NA	False	TTTAAA	-31	NA	2724565	2720670	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr7_-_2720790_2722519_2723561_2724119
H1_mix_00080964	chr7	-	2081	11	FSM	ENSG00000157927.17	ENST00000473130.5	2108	11	31	-4	31	0	multi-exon	FALSE	canonical	1	1	junction_10	24.1331721909906	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGGTGCCCTGCTGGGGTC	5876	False	NA	-7	True	AATAAA	-19	NA	4832178	4799104	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_4799484_4799629_4799770_4800170_4800311_4801652_4801996_4803545_4803755_4805565_4805717_4815277_4815451_4816227_4816466_4817238_4817352_4822393_4822551_4832140
H1_mix_00080966	chr7	-	410	1	FSM	ENSG00000213935.3	ENST00000454916.1	373	1	6	-43	6	43	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTTGGGAACAACAACAAA	18	False	NA	NA	False	ATTAAA	-41	NA	4865798	4865388	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_4865400_4865800
H1_mix_00080967	chr7	-	4659	14	ISM	ENSG00000182095.15	ENST00000430969.6	10839	30	71508	581	9701	-581	3prime_fragment	FALSE	canonical	3	6	junction_12	11.4328500021472	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGGGAGGTGGCACTTCT	NA	False	NA	NA	False	NA	NA	NA	5352326	5307391	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_5308313_5308874_5308950_5309131_5309369_5312502_5313864_5314983_5315149_5315955_5316073_5320317_5320427_5320531_5320608_5321072_5321191_5324213_5324356_5325095_5325249_5332621_5333050_5345561_5345811_5351818
H1_mix_00080968	chr7	-	1220	5	FSM	ENSG00000182095.15	ENST00000328270.3	1220	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	1.29903810567666	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGGCACCGGGGGCCGT	NA	False	NA	NA	False	NA	NA	NA	5320607	5313110	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_5313864_5314983_5315149_5315955_5316073_5320317_5320427_5320531
H1_mix_00080971	chr7	-	2479	7	ISM	ENSG00000182095.15	ENST00000399537.8	10572	30	52473	44500	-9046	712	internal_fragment	FALSE	canonical	2	5	junction_6	3.68178700572909	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTGTGCCTTGTCTCT	NA	False	NA	NA	False	ATTAAA	-24	NA	5371073	5351289	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_5352095_5356915_5357277_5359397_5359570_5361593_5361723_5361896_5362034_5362649_5362826_5370374
H1_mix_00080972	chr7	-	1922	1	FSM	ENSG00000207973.1	ENST00000385238.1	99	1	-477	-1346	-477	1346	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTATTTATTTAATTT	NA	False	NA	-11	True	AATAAA	-19	NA	5496394	5494472	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_5494500_5496400
H1_mix_00080975	chr7	-	5880	17	NNC	ENSG00000011275.19	novel	5777	17	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_13	64.4607438678767	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGCTTCGTCTCTCCAC	22	False	5781685	-7	True	AATAAA	-20	NA	5781663	5620045	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_5623180_5624055_5624126_5641153_5641377_5652412_5652511_5711760_5711840_5712714_5712864_5715052_5715191_5716715_5716767_5721032_5721173_5725323_5725439_5729431_5729597_5730714_5730818_5739275_5739626_5740972_5741645_5752845_5752980_5761002_5761139_5781540
H1_mix_00080976	chr7	-	2730	14	FSM	ENSG00000122512.16	ENST00000441476.6	2730	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_11	26.2984689184679	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGGAGCATTGCTTGCAA	NA	False	NA	-6	True	AATACA	-44	NA	6009106	5973241	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_5973543_5977587_5977758_5978595_5978697_5982823_5982992_5986758_5987621_5989799_5989956_5991972_5992058_5995533_5995634_5997325_5997424_5999107_5999276_6002452_6002637_6003971_6004059_6005891_6006032_6008996
H1_mix_00080981	chr7	-	370	1	FSM	ENSG00000231359.3	ENST00000496556.1	306	1	-68	4	-68	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATACCTGTTACCACTTTC	NA	False	NA	NA	False	NA	NA	NA	6491166	6490796	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_6490800_6491200
H1_mix_00080982	chr7	-	5078	6	NNC	ENSG00000164631.19	novel	2921	6	NA	NA	0	79631	intron_retention	FALSE	non_canonical	0	0	junction_1	29.6175623574932	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGATTGCTAAGAAAATACC	6	True	NA	NA	False	AATAAA	-25	NA	6706923	6608801	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_6608829_6688432_6692704_6697338_6697435_6697684_6697812_6705158_6705224_6706431
H1_mix_00080983	chr7	-	2921	6	FSM	ENSG00000164631.19	ENST00000342651.9	2921	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	28.0528073461463	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAAGATTCCTGCTGTGA	6	True	NA	20	True	AAAAAG	-3	NA	6706923	6690448	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_6692488_6692601_6692704_6697338_6697435_6697684_6697812_6705158_6705224_6706431
H1_mix_00080984	chr7	-	2781	4	FSM	ENSG00000146574.16	ENST00000467004.5	2867	4	90	-4	90	0	multi-exon	FALSE	canonical	3	530	junction_3	571.823010690857	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTTTGGTGTTGAGTC	NA	False	NA	0	True	AATAAA	-20	NA	6807088	6798936	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_6799280_6800947_6801076_6801364_6801524_6804937
H1_mix_00080985	chr7	-	2208	14	FSM	ENSG00000146574.16	ENST00000626257.2	2211	14	10	-7	10	3	multi-exon	FALSE	canonical	2	32	junction_12	584.833724409854	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTGGTGTTGAGTCTCT	480	False	NA	3	True	AATAAA	-23	NA	6826760	6798933	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_6799280_6800947_6801076_6801364_6801524_6804937_6805056_6806003_6806038_6811951_6812064_6812975_6813038_6814763_6814846_6819765_6819942_6822280_6822365_6823312_6823361_6824088_6824167_6824639_6824738_6826077
H1_mix_00080988	chr7	-	1015	1	FSM	ENSG00000205897.5	ENST00000496207.1	1015	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGTTAGAAAGGGCAACCA	NA	False	NA	NA	False	NA	NA	NA	6867672	6866657	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_6866700_6867700
H1_mix_00080989	chr7	-	224	1	FSM	ENSG00000243531.1	ENST00000490376.1	200	1	-27	3	-27	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTGCCTTTTATAGACAC	5412	False	NA	NA	False	NA	NA	NA	6900650	6900426	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_6900400_6900600
H1_mix_00080991	chr7	-	2450	15	NNC	ENSG00000003147.19	novel	2440	14	NA	NA	0	-5	intron_retention	FALSE	non_canonical	0	0	junction_3	157.047048715358	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGCAAAGTCAAGTTTATG	7	True	NA	29	True	ATTAAA	-17	NA	8262543	8113191	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_8114045_8127872_8128143_8138839_8138879_8138982_8139048_8141764_8141818_8141968_8142056_8143874_8143971_8157115_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232756_8235909_8236006_8262439
H1_mix_00080992	chr7	-	2419	15	FSM	ENSG00000003147.19	ENST00000455539.5	1956	15	0	-463	0	0	multi-exon	FALSE	canonical	3	10	junction_10	132.887266170255	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATACCACTGTCTCCTTT	14	True	NA	-88	True	NA	NA	NA	8262153	8113308	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_8114045_8127872_8128143_8138839_8138882_8138984_8139048_8141764_8141818_8143874_8143973_8157115_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8227637_8227852_8228600_8228674_8232589_8232756_8235909_8236006_8262093
H1_mix_00080993	chr7	-	1936	15	NIC	ENSG00000003147.19	novel	1956	15	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_5	122.951707792042	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTACTCTTATTTGGTA	74	False	NA	-12	True	AATAAA	-37	NA	8262606	8113771	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_8114045_8127872_8128143_8138839_8138882_8138984_8139048_8141764_8141818_8141968_8142056_8143874_8143973_8157115_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232756_8235909_8236006_8262439
H1_mix_00081001	chr7	-	4615	26	NNC	ENSG00000146530.15	novel	4700	26	NA	NA	14	-18	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	23.9588313571426	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCCACCCATTCACAATA	9	True	NA	-51	True	NA	NA	NA	12403851	12330935	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_12331198_12333464_12333569_12336140_12336237_12336987_12337084_12337176_12337296_12340321_12340418_12342058_12342155_12343082_12343179_12344194_12344291_12344373_12344470_12351572_12351714_12356110_12356331_12357264_12357516_12359577_12359693_12361146_12361252_12361365_12361522_12367356_12367494_12369544_12370510_12370655_12370865_12377775_12377921_12379476_12379567_12380485_12380734_12383535_12383602_12389126_12389359_12393593_12393779_12403658
H1_mix_00081003	chr7	-	595	3	Antisense	novelGene_ENSG00000229618.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTATGGCTTGGGTCCA	NA	False	NA	NA	False	NA	NA	NA	13806685	13616762	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr7_-_13616848_13738089_13738176_13806261
H1_mix_00081006	chr7	-	319	1	FSM	ENSG00000235828.5	ENST00000476382.1	318	1	3	-4	3	4	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCATCTTTTATTATGAAG	NA	False	NA	NA	False	NA	NA	NA	15701749	15701430	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_15701400_15701700
H1_mix_00081009	chr7	-	985	2	FSM	ENSG00000122691.13	ENST00000242261.6	1630	2	645	0	-67	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTAGAGTTTGGTCTATAT	644	False	NA	NA	False	AATAAA	-23	NA	19116991	19115467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_19116132_19116670
H1_mix_00081010	chr7	-	1637	6	NNC	ENSG00000243004.7	novel	799	6	NA	NA	-23	21349	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	247.380678307745	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCAACTCTTGGTTGTGA	225	False	NA	NA	False	AATAAA	-16	NA	20125185	19897631	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_19898748_19960921_19960995_19968153_19968396_20028918_20028960_20045502_20045562_20125079
H1_mix_00081011	chr7	-	7023	6	FSM	ENSG00000243004.7	ENST00000691231.1	799	6	-157	-6067	-113	6067	multi-exon	FALSE	canonical	3	128	junction_1	216.298312522313	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGAATAAAAGTACACAAAA	2181	False	NA	-27	True	NA	NA	NA	20123229	19912913	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_19919261_19960921_19960995_19968136_19968396_20028918_20028960_20045502_20045562_20122985
H1_mix_00081012	chr7	-	6263	6	NIC	ENSG00000243004.7	novel	571	6	NA	NA	-713	4776	combination_of_known_junctions	FALSE	canonical	3	117	junction_1	230.362670587055	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGGAAGAAAGAAAGATAATA	1581	False	NA	NA	False	NA	NA	NA	20123829	19926294	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_19931299_19960921_19960995_19968153_19968396_20028918_20028960_20045502_20045562_20122985
H1_mix_00081013	chr7	-	1411	5	NNC	ENSG00000243004.7	novel	571	6	NA	NA	670	-16771	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_4	280.04196114154	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATATTCAAATCCTTTTA	3008	False	NA	-26	True	NA	NA	NA	20122402	19959989	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_19960995_19968153_19968396_20028918_20028960_20045502_20045562_20122338
H1_mix_00081014	chr7	-	1108	4	NIC	ENSG00000243004.7	novel	587	6	NA	NA	-336	293	combination_of_known_junctions	FALSE	canonical	3	117	junction_1	261.401776751592	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCACTTACCATAAATGGAG	1958	False	NA	NA	False	AGTAAA	-40	NA	20123452	20006811	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_20007353_20028918_20028960_20045502_20045562_20122985
H1_mix_00081015	chr7	-	6195	1	Genic_Genomic	ENSG00000243004.7_ENSG00000183742.13	novel	NA	NA	NA	NA	2192	1936	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCATCCCCGTTCTGAAAA	2318	False	NA	NA	False	NA	NA	NA	20138182	20131987	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr7_-_20132000_20138200
H1_mix_00081018	chr7	-	1197	5	FSM	ENSG00000105889.16	ENST00000406890.6	1193	5	0	-4	0	4	multi-exon	FALSE	canonical	2	5	junction_3	24.1078306780183	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGCATCTCTTAATTATCA	0	True	NA	-32	True	ATTAAA	-22	NA	22500177	22419439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_22419837_22492564_22492730_22493323_22493780_22494771_22494887_22500113
H1_mix_00081019	chr7	-	797	4	FSM	ENSG00000105889.16	ENST00000439708.1	797	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	34.4995974211616	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTATGTGTCTCTGGGAA	NA	False	NA	NA	False	AATAAA	-39	NA	22632925	22492676	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_22492730_22493323_22493837_22494771_22494887_22632809
H1_mix_00081020	chr7	-	1766	1	FSM	ENSG00000233476.3	ENST00000434005.1	1384	1	-64	-318	-64	318	mono-exon	FALSE	NA	NA	NA	NA	NA	428	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGAACAGACACTTCAAC	-1	False	NA	NA	False	ATTAAA	-36	NA	22512063	22510297	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_22510300_22512100
H1_mix_00081021	chr7	-	412	4	NNC	ENSG00000196683.12	novel	514	4	NA	NA	0	13339	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2581.21302233401	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAGTGGAAGAAATGTTG	15	True	NA	NA	False	NA	NA	NA	22822791	22799288	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_22799325_22812973_22813186_22817999_22818049_22822676
H1_mix_00081022	chr7	-	514	4	FSM	ENSG00000196683.12	ENST00000372879.8	514	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	2553.83559028811	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTTGAGTCTTTTTTGA	15	True	NA	-4	True	AATAAA	-16	NA	22822791	22812972	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_22813186_22817411_22817549_22817999_22818049_22822676
H1_mix_00081023	chr7	-	13185	11	FSM	ENSG00000122591.13	ENST00000432176.7	13178	11	0	-7	0	7	multi-exon	FALSE	canonical	3	8	junction_1	122.993658373105	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGAGGCGGAAACTTG	-6	True	NA	NA	False	AAAAAG	-3	NA	23014130	22934203	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_22946164_22960255_22960416_22961234_22961323_22964414_22964532_22976209_22976306_22976692_22976809_22977340_22977422_22978268_22978449_22983943_22984046_22991060_22991140_23013924
H1_mix_00081024	chr7	-	6337	11	FSM	ENSG00000122591.13	ENST00000440481.6	6337	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_10	113.98284958712	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAATATTTTTTCCAG	-6	True	NA	-23	True	AATAAA	-5	NA	23014130	22941268	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_22946164_22946951_22947248_22960255_22960416_22961234_22961323_22964414_22964532_22976209_22976306_22976692_22976809_22977340_22977422_22978268_22978449_22983943_22984046_23013924
H1_mix_00081027	chr7	-	3392	3	FSM	ENSG00000230658.2	ENST00000419813.2	3422	3	30	0	30	0	multi-exon	FALSE	canonical	2	5	junction_2	2.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAATTAATAAGCTGAAGTA	16	True	NA	NA	False	NA	NA	NA	23105672	23100374	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_23103579_23104249_23104318_23105552
H1_mix_00081028	chr7	-	496	5	FSM	ENSG00000136231.14	ENST00000476938.5	500	5	0	4	0	-4	multi-exon	FALSE	canonical	3	154	junction_3	5.87367006223537	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATTACATTTTCAATATA	6748	False	NA	NA	False	AGTAAA	-20	NA	23470016	23361344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_23361598_23361689_23361742_23418775_23418825_23468481_23468543_23469935
H1_mix_00081029	chr7	-	1800	3	FSM	ENSG00000164548.12	ENST00000482395.1	661	3	-603	-536	-603	0	multi-exon	FALSE	canonical	3	392	junction_1	30	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGGATTGTCTCTTTA	1190	False	NA	-8	True	AATAAA	-15	NA	23507083	23504783	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_23505570_23505745_23505814_23506137
H1_mix_00081030	chr7	-	2376	8	NIC	ENSG00000164548.12	novel	2142	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	48	junction_7	128.575714214288	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATTGTCTCTTTATTGT	-1	True	NA	-4	True	AATAAA	-19	NA	23531980	23504779	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_23505570_23505745_23505814_23506137_23506267_23507419_23507536_23512893_23513083_23516362_23516529_23521706_23522433_23531788
H1_mix_00081031	chr7	-	408	1	FSM	ENSG00000232553.3	ENST00000416636.2	1294	1	615	271	615	-271	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAAATATTTTTACCGGG	784	False	NA	NA	False	AAGAAA	-1	NA	23585740	23585332	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_23585300_23585700
H1_mix_00081032	chr7	-	4183	2	FSM	ENSG00000105928.16	ENST00000479636.1	4182	2	0	-1	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTTTGCTTTTTATTCT	NA	False	NA	-3	True	ATTAAA	-18	NA	24706037	24698354	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_24699260_24702759
H1_mix_00081033	chr7	-	611	5	FSM	ENSG00000105928.16	ENST00000446822.6	611	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	28.4462211901687	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTTTTGTTCTTTT	NA	False	NA	-1	True	TATAAA	-17	NA	24719096	24707278	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_24707426_24708126_24708255_24710223_24710389_24717253_24717375_24719046
H1_mix_00081035	chr7	-	554	4	FSM	ENSG00000070882.13	ENST00000487020.5	554	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	25.4950975679639	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGTTTCTTTACAATTTCAA	5249	False	NA	-130	True	NA	NA	NA	24815093	24800028	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_24800280_24804314_24804438_24809806_24809952_24815058
H1_mix_00081037	chr7	-	1287	4	NNC	ENSG00000172115.9	novel	799	4	NA	NA	0	21928	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1281.63966161407	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGGCACGGTGGCTGACG	23	True	NA	NA	False	AAAAAG	-1	NA	25125260	25096727	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_25096753_25122825_25123850_25123950_25124128_25125199
H1_mix_00081038	chr7	-	1284	4	NNC	ENSG00000172115.9	novel	799	4	NA	NA	0	21928	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1281.63966161407	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGGCACGGTGGCTGACG	23	True	NA	NA	False	AAAAAG	-1	NA	25125260	25096727	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_25096754_25122829_25123850_25123950_25124128_25125199
H1_mix_00081039	chr7	-	485	5	FSM	ENSG00000153790.12	ENST00000443822.5	555	5	70	0	70	0	multi-exon	FALSE	canonical	3	7	junction_3	3.96074487943871	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCGCGGCGCCATGTTCC	999	False	NA	NA	False	NA	NA	NA	25179332	25155144	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_25155193_25158500_25158531_25161188_25161261_25168288_25168466_25179174
H1_mix_00081040	chr7	-	651	4	FSM	ENSG00000153790.12	ENST00000415598.5	757	4	106	0	104	0	multi-exon	FALSE	canonical	3	7	junction_1	4.18993502999218	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACAAAAAAAGTGATGTCT	81	False	NA	NA	False	NA	NA	NA	25180250	25161224	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_25161261_25168288_25168466_25179174_25179333_25179970
H1_mix_00081041	chr7	-	1741	12	NNC	ENSG00000122566.22	novel	3664	12	NA	NA	0	9817	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2811.32449594272	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAAGCTAAGAAATTAA	1	True	NA	NA	False	AAAAAG	-2	NA	26200746	26161333	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_26161364_26191843_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
H1_mix_00081042	chr7	-	3907	12	FSM	ENSG00000122566.22	ENST00000678277.1	3907	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	3502.43627132754	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAAGACCAGGTTAATT	472	False	NA	NA	False	AAGAAA	-2	NA	26201301	26189665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190461_26190992_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196654_26196806_26197018_26197314_26197462_26197621_26197733_26200571
H1_mix_00081043	chr7	-	6718	11	FSM	ENSG00000122566.22	ENST00000490912.6	6718	11	0	0	0	0	multi-exon	FALSE	canonical	3	691	junction_1	2664.1920445043	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGCGTTTGAGTACTC	244	False	NA	-16	True	AATAAA	-23	NA	26201529	26189926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190461_26190992_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621
H1_mix_00081044	chr7	-	3450	12	NIC	ENSG00000122566.22	novel	3664	12	NA	NA	11	0	intron_retention	FALSE	canonical	1	2	junction_7	3660.02098399801	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGGTGTAATGTTTACA	1038	False	NA	-7	True	AATAAA	-18	NA	26200735	26190124	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196654_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26200571
H1_mix_00081046	chr7	-	3297	11	FSM	ENSG00000122566.22	ENST00000677656.1	3273	11	0	-24	0	0	multi-exon	FALSE	canonical	3	34	junction_1	2864.9992478184	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGGTGTAATGTTTACA	472	False	NA	-7	True	AATAAA	-18	NA	26201301	26190124	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26191651_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
H1_mix_00081047	chr7	-	3423	10	ISM	ENSG00000005020.13	ENST00000345317.7	3839	13	20463	46	11024	-46	3prime_fragment	FALSE	canonical	2	12	junction_9	3.64471543707927	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTGCAAATTTTTAAGGT	NA	False	NA	-52	True	NA	NA	NA	26844127	26667113	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_26669657_26670090_26670193_26684735_26684849_26690284_26690363_26725427_26725566_26725922_26725987_26726881_26727007_26738794_26738879_26739886_26739965_26844029
H1_mix_00081048	chr7	-	342	3	ISM	ENSG00000005020.13	ENST00000487720.1	536	5	1	10119	1	-10119	5prime_fragment	FALSE	canonical	3	14	junction_1	2	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAAGACAAAGGTAAGTTT	3	True	NA	NA	False	TTTAAA	-36	NA	26864584	26854148	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_26854163_26854784_26854891_26864362
H1_mix_00081049	chr7	-	628	2	Intergenic	novelGene_1352	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGTTAATTTTGCTCCA	1897	False	NA	NA	False	AAAACA	-13	NA	27456979	27430540	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_-_27430565_27456375
H1_mix_00081050	chr7	-	585	1	FSM	ENSG00000235574.1	ENST00000450406.1	1084	1	673	-174	673	174	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCCCAGAGGTGGGGCT	NA	False	NA	NA	False	NA	NA	NA	27492092	27491507	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_27491500_27492100
H1_mix_00081051	chr7	-	566	2	FSM	ENSG00000106049.9	ENST00000496814.1	570	2	0	4	0	-4	multi-exon	FALSE	canonical	3	345	junction_1	0	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTTTTAGCTCTGTAT	67	True	NA	NA	False	NA	NA	NA	27662857	27649227	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_27649634_27662697
H1_mix_00081052	chr7	-	567	3	FSM	ENSG00000106066.15	ENST00000455893.6	561	3	0	-6	0	0	multi-exon	FALSE	canonical	3	14	junction_2	210	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGCTTTTGTTTTTGGGG	NA	False	NA	38	True	AATAAA	-18	NA	29071904	28995630	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_28995883_29030576_29030760_29071772
H1_mix_00081053	chr7	-	1434	3	FSM	ENSG00000223813.4	ENST00000447171.2	1434	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	3.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTGACAGTATCAAGAA	-5	True	NA	NA	False	AATAAA	-16	NA	29563663	29514223	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_29515318_29561858_29561923_29563387
H1_mix_00081054	chr7	-	1377	2	FSM	ENSG00000223813.4	ENST00000450540.3	1397	2	21	-1	-7	0	multi-exon	FALSE	canonical	3	8	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTGACAGTATCAAGAA	22	False	NA	NA	False	AATAAA	-16	NA	29563670	29514223	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_29515318_29563387
H1_mix_00081055	chr7	-	5108	5	NNC	ENSG00000106080.11	novel	703	5	NA	NA	0	4647	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	42.7843429305628	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTCTTTTTGTGCATTT	30	True	NA	NA	False	NA	NA	NA	30026636	30005939	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_30006139_30010589_30014894_30018995_30019124_30022664_30022817_30026311
H1_mix_00081056	chr7	-	4401	13	NIC	ENSG00000106100.11	novel	4503	14	NA	NA	14	-1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_4	5.35607132140714	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACGGGTTGAGTCTGGAG	47	False	NA	-4	True	AATAAA	-15	NA	30478770	30424530	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_30425711_30429373_30429458_30433095_30433180_30435997_30436082_30446140_30446225_30446966_30447051_30448297_30448382_30451215_30453041_30455136_30455312_30456720_30457043_30459151_30459241_30459900_30460042_30478605
H1_mix_00081057	chr7	-	1342	6	FSM	ENSG00000196295.13	ENST00000584023.2	1342	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	5.77581163127746	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACTGTTAAATACCACCA	9459	False	NA	NA	False	ATTAAA	-13	NA	30585459	30574441	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_30574882_30576563_30576711_30577648_30578092_30579230_30579315_30584710_30584809_30585329
H1_mix_00081059	chr7	-	1007	5	NIC	ENSG00000205763.14	novel	1303	6	NA	NA	-32	-245	combination_of_known_junctions	FALSE	canonical	3	9	junction_4	6.81909084849293	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGTGGCAGGACTGGGAG	-19	True	NA	NA	False	NA	NA	NA	32943208	32917059	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_32917543_32918310_32918373_32921338_32921431_32930077_32930109_32942869
H1_mix_00081060	chr7	-	369	2	FSM	ENSG00000122643.23	ENST00000473083.1	369	2	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGAAGACCTCTCTCCT	NA	False	NA	NA	False	TATAAA	-10	NA	33015926	33014719	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_33014832_33015669
H1_mix_00081063	chr7	-	4202	6	FSM	ENSG00000164542.13	ENST00000317020.10	4241	6	39	0	-1	0	multi-exon	FALSE	canonical	2	8	junction_4	6.28012738724303	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTCAGATGAAGTGTGTG	-8	True	NA	-11	True	AATAAA	-17	NA	36367202	36324229	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_36326919_36330981_36331080_36333855_36334162_36335045_36335179_36356901_36357591_36366915
H1_mix_00081067	chr7	-	555	1	FSM	ENSG00000178503.6	ENST00000320802.6	830	1	584	-309	584	309	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTAAAATTTGTCTTATC	NA	False	NA	NA	False	NA	NA	NA	37585745	37585190	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_37585200_37585700
H1_mix_00081070	chr7	-	3181	28	FSM	ENSG00000006715.16	ENST00000395969.6	3181	28	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_24	41.8745923142122	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAGGACTCACTTTTACT	18	False	NA	-5	True	AATAAA	-18	NA	38909174	38725554	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_38726327_38726908_38726989_38728541_38728587_38728691_38728792_38741984_38742122_38743401_38743543_38745558_38745614_38752175_38752314_38754701_38754753_38754894_38754937_38756837_38756983_38758353_38758482_38763454_38763548_38765579_38765662_38767536_38767599_38771197_38771255_38772521_38772638_38774114_38774245_38776678_38776777_38789800_38789868_38795464_38795612_38796744_38796865_38817816_38817883_38821202_38821266_38862544_38862623_38869145_38869254_38898090_38898130_38909153
H1_mix_00081072	chr7	-	1756	1	FSM	ENSG00000236015.1	ENST00000438427.1	823	1	-270	-663	-270	663	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGGTTACATTTTTTATTT	NA	False	NA	NA	False	AATAAA	-34	NA	39570468	39568712	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_39568700_39570500
H1_mix_00081075	chr7	-	891	9	NNC	ENSG00000106588.12	novel	1453	9	NA	NA	0	53899	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3558.11135822082	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGGTTGTAATCCTAGTC	23	False	NA	NA	False	AAAAAG	-1	NA	42932154	42862928	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_42862957_42917411_42917691_42917777_42917836_42921857_42921932_42923324_42923407_42924674_42924798_42926535_42926669_42927382_42927460_42932117
H1_mix_00081077	chr7	-	1537	7	FSM	ENSG00000106588.12	ENST00000679247.1	1567	7	152	-122	0	122	multi-exon	FALSE	canonical	3	10159	junction_3	505.240344346684	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTAATTTGGTTTACAGAA	4713	False	NA	NA	False	GATAAA	-3	NA	42927464	42916705	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_42917691_42917777_42917836_42921857_42921932_42923324_42923407_42924674_42924798_42926535_42926669_42927382
H1_mix_00081080	chr7	-	883	7	NNC	ENSG00000106603.20	novel	1085	7	NA	NA	0	1539	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	371.212727272232	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATCGAAAAGCTAGATT	23	True	NA	NA	False	NA	NA	NA	43729483	43606916	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_43606942_43639257_43639682_43640572_43640650_43645250_43645400_43647534_43647635_43648599_43648653_43729428
H1_mix_00081081	chr7	-	3223	8	FSM	ENSG00000106603.20	ENST00000438444.5	3223	8	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	461.009362869195	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAATTTGTTGAATGAG	NA	False	NA	NA	False	AATAAA	-25	NA	43729717	43631151	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_43633409_43639448_43639682_43640572_43640650_43645250_43645400_43647534_43647635_43648599_43648653_43665657_43665723_43729428
H1_mix_00081082	chr7	-	3815	6	FSM	ENSG00000106608.17	ENST00000426198.5	885	6	0	-2930	0	-1	multi-exon	FALSE	canonical	2	4	junction_5	36.7074924232097	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGTGCACAAGTGATGGT	-20	True	NA	-27	True	AATAAA	-15	NA	43926411	43875913	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_43879261_43881658_43881698_43881906_43881958_43887414_43887486_43887789_43887817_43926131
H1_mix_00081085	chr7	-	580	3	FSM	ENSG00000122678.17	ENST00000467607.1	580	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	11	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATGCTGCCCCCTGACCC	5	True	NA	NA	False	NA	NA	NA	44074118	44073217	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44073378_44073624_44073709_44073782
H1_mix_00081086	chr7	-	1174	6	FSM	ENSG00000122678.17	ENST00000434229.5	1174	6	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_4	18.2800437636238	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGCCGTGAGAGTGGACT	17	True	NA	NA	False	GGGGCT	-36	NA	44082483	44073861	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44074026_44074130_44074531_44076508_44076630_44078739_44078812_44080732_44080917_44082250
H1_mix_00081088	chr7	-	844	5	FSM	ENSG00000122678.17	ENST00000492312.5	1149	5	0	305	0	-8	multi-exon	FALSE	canonical	3	48	junction_2	1.80277563773199	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGGGGCAGCTGACCCAG	16	True	NA	NA	False	NA	NA	NA	44082484	44078655	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44078812_44079570_44079742_44079860_44079960_44080732_44080917_44082250
H1_mix_00081095	chr7	-	321	3	FSM	ENSG00000106631.8	ENST00000431007.1	321	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	81.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAAGCTCAATGGTGAGC	468	False	NA	NA	False	NA	NA	NA	44141074	44140336	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44140428_44140711_44140828_44140960
H1_mix_00081100	chr7	-	8080	18	Fusion	ENSG00000136271.11_ENSG00000158604.15	novel	1855	14	NA	NA	0	0	multi-exon	FALSE	canonical	0	0	junction_14	108.68544498486	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTGACAACAGAATAAAAAT	11	True	NA	-50	True	NA	NA	NA	44582210	44565836	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_-_44566080_44566447_44566525_44568117_44568224_44568902_44568993_44569129_44569204_44569808_44569904_44570014_44570129_44570757_44570878_44571491_44571737_44572346_44572438_44572573_44572745_44572889_44573051_44573582_44573745_44573835_44579629_44581092_44581240_44581448_44581575_44581722_44581824_44582046
H1_mix_00081103	chr7	-	589	4	FSM	ENSG00000105968.19	ENST00000437072.5	589	4	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	937.934018053627	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTATGTTTGACCTTTT	-4	True	NA	NA	False	TATAAA	-6	NA	44848082	44829896	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44830164_44835528_44835659_44843276_44843355_44847968
H1_mix_00081104	chr7	-	628	4	FSM	ENSG00000105968.19	ENST00000381124.9	628	4	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_1	962.819124585021	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAAATTAATTTGTCTCA	-2	True	NA	-33	True	GATAAA	-9	NA	44848080	44834238	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44834563_44840898_44841013_44843276_44843355_44847968
H1_mix_00081105	chr7	-	3113	2	FSM	ENSG00000232956.10	ENST00000577700.5	3116	2	0	3	0	-1	multi-exon	FALSE	canonical	3	492	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTAGTCTTGCCTGTTT	-1	True	NA	-6	True	AATAAA	-17	NA	44986637	44983025	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44983323_44983821
H1_mix_00081106	chr7	-	1123	4	FSM	ENSG00000232956.10	ENST00000667823.2	1124	4	0	1	0	-1	multi-exon	FALSE	canonical	3	409	junction_2	46.8069320602076	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTAGTCTTGCCTGTTT	162	False	44986691	-6	True	AATAAA	-17	NA	44986668	44983025	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44983323_44983821_44984427_44986020_44986098_44986524
H1_mix_00081107	chr7	-	2345	4	FSM	ENSG00000232956.10	ENST00000653305.1	2344	4	0	-1	0	0	multi-exon	FALSE	canonical	3	430	junction_2	37.2588542795162	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGTATCTCCTGAATG	165	False	44986691	-65	True	NA	NA	NA	44986665	44983084	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44983323_44983821_44984047_44984356_44986098_44986524
H1_mix_00081113	chr7	-	284	1	FSM	ENSG00000201772.1	ENST00000364902.1	137	1	12	-159	12	159	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTGAGCTGACCTCTGC	6673	False	NA	NA	False	NA	NA	NA	45105030	45104746	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_45104700_45105000
H1_mix_00081114	chr7	-	1635	13	FSM	ENSG00000214765.9	ENST00000338231.8	1716	13	75	6	-10	-2	multi-exon	FALSE	canonical	3	25	junction_1	50.995846780781	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAACTTATCATTGCATC	32	False	NA	NA	False	AATAAA	-21	NA	45768943	45723789	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_45724024_45724352_45724481_45726183_45726237_45728177_45728314_45736786_45736911_45744996_45745049_45747214_45747312_45748625_45748715_45751528_45751647_45756908_45756993_45758042_45758178_45759073_45759175_45768659
H1_mix_00081115	chr7	-	1920	13	FSM	ENSG00000214765.9	ENST00000428414.5	1920	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	58.0442838605912	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGCCCCCTCTCTCTTTC	11	True	NA	-6	True	AATAAA	-14	NA	45768964	45724049	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_45724481_45726183_45726237_45728177_45728314_45728831_45729027_45736786_45736911_45744996_45745049_45747214_45747312_45748625_45748715_45751528_45751647_45756908_45756993_45758042_45758178_45759073_45759175_45768659
H1_mix_00081116	chr7	-	7953	31	NNC	ENSG00000136205.17	novel	7585	31	NA	NA	1821	2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_30	20.4869606226877	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCGTGAGACGGTATTTGT	11	True	NA	-14	True	AATAAA	-19	NA	47537456	47275151	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_47278221_47280163_47280191_47280285_47280355_47283696_47283866_47291954_47292033_47292827_47292906_47293732_47293829_47297081_47297214_47302185_47302273_47302949_47303585_47304831_47305004_47344754_47344839_47344923_47345039_47346186_47346357_47368364_47369622_47396799_47396905_47400392_47400459_47400784_47400915_47411726_47411803_47413936_47413998_47415093_47415207_47424100_47424185_47428311_47428377_47435281_47435405_47437262_47437314_47439486_47439659_47442002_47442056_47481102_47481142_47506906_47506945_47529035_47529148_47537029
H1_mix_00081118	chr7	-	3471	4	FSM	ENSG00000132436.12	ENST00000356889.8	3471	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	10.6144555520604	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTTGCATTCTAAATTGT	25	False	NA	-13	True	ATTAAA	-24	NA	50450324	50444127	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_50447298_50448180_50448290_50449555_50449724_50450300
H1_mix_00081120	chr7	-	5136	17	NIC	ENSG00000106070.20	novel	5468	19	NA	NA	55	-2	combination_of_known_splicesites	FALSE	canonical	1	4	junction_16	186.036360273335	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTGCTGGTGATATCTG	-5	True	NA	-7	True	AATAAA	-24	NA	50782841	50590064	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50732271_50732369_50782423
H1_mix_00081121	chr7	-	4931	17	NIC	ENSG00000106070.20	novel	2156	18	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	35	junction_16	180.521769809073	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTGCTGGTGATATCTG	13	True	NA	-7	True	AATAAA	-24	NA	50793436	50590064	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50732271_50732369_50793223
H1_mix_00081123	chr7	-	2490	19	FSM	ENSG00000106070.20	ENST00000643299.1	2490	19	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_16	234.57397685439	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATCTTGACAATTAAAACT	NA	False	NA	-50	True	AATGAA	-15	NA	50755903	50592609	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50705139_50705324_50710874_50710991_50732271_50732369_50755886
H1_mix_00081127	chr7	-	432	5	NNC	ENSG00000132432.14	novel	732	5	NA	NA	0	62248	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1836.44988701026	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACTCGCAAGATGCAGAG	6	True	NA	NA	False	NA	NA	NA	54759198	54690001	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_54690027_54752257_54752421_54755778_54755882_54757494_54757595_54759157
H1_mix_00081129	chr7	-	1181	2	NNC	ENSG00000146733.14	novel	1974	8	NA	NA	-16058	932	at_least_one_novel_splicesite	TRUE	canonical	2	99	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAGCAAATCAGATGAATC	NA	False	NA	-6	True	ATTAAA	-16	NA	56067662	56010118	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_56011270_56067632
H1_mix_00081130	chr7	-	1974	8	FSM	ENSG00000146733.14	ENST00000275605.8	1974	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_7	150.438271292207	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGATTTGTGGAATTTTCAG	-13	True	NA	-20	True	AATAAA	-21	NA	56051444	56011063	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_56011870_56015022_56015172_56017233_56017380_56019599_56019735_56021072_56021232_56031928_56032055_56033960_56034107_56051137
H1_mix_00081134	chr7	-	480	4	Fusion	ENSG00000146733.14_ENSG00000185290.4	novel	1409	7	NA	NA	134	-190	multi-exon	FALSE	non_canonical	0	0	junction_3	101.470302168774	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTTTTACAAGTTATAC	128	False	NA	-75	True	NA	NA	NA	56116283	56011727	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_-_56011870_56021072_56021232_56116014_56116131_56116220
H1_mix_00081138	chr7	-	572	2	FSM	ENSG00000146733.14	ENST00000472276.1	572	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAGGAAAATAATAAAATCC	-12	True	NA	NA	False	TTTAAA	-33	NA	56034171	56033133	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_56033495_56033960
H1_mix_00081141	chr7	-	1010	1	FSM	ENSG00000213642.3	ENST00000409132.2	1010	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCAACCCAGTGGAGCTCG	NA	False	NA	NA	False	NA	NA	NA	64570437	64569427	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_64569400_64570400
H1_mix_00081142	chr7	-	1988	4	NNC	ENSG00000272693.5	novel	1962	8	NA	NA	-4	-22563	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	9.97775303139718	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTTCTGCAGGCTTTGC	-8	True	NA	NA	False	AATAAA	-27	NA	65750942	65720424	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_65722125_65726770_65726945_65727054_65727109_65750882
H1_mix_00081144	chr7	-	2567	4	FSM	ENSG00000169919.17	ENST00000466883.5	2555	4	0	-12	0	8	multi-exon	FALSE	canonical	3	30	junction_3	173.971261994618	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCATTTCTGTGCGTCGTG	6063	False	NA	-4	True	AATAAA	-37	NA	65976160	65960675	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_65961064_65964322_65964459_65967730_65967908_65974294
H1_mix_00081150	chr7	-	498	7	FSM	ENSG00000179406.9	ENST00000429320.1	498	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	4.29793231940921	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGGAGATGTTACGGGT	3523	False	NA	NA	False	NA	NA	NA	66490059	66476302	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_66476328_66479008_66479097_66480393_66480449_66481540_66481600_66485094_66485154_66487948_66488039_66489937
H1_mix_00081151	chr7	-	1372	1	FSM	ENSG00000179406.9	ENST00000654214.1	614	1	-9	-749	-1	-180	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCACCTGGAAAAACCTG	-3	True	NA	NA	False	NA	NA	NA	66493560	66492188	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_66492200_66493600
H1_mix_00081152	chr7	-	2051	5	NIC	ENSG00000229180.8	novel	2602	9	NA	NA	-8	165	combination_of_known_junctions	FALSE	canonical	3	18	junction_4	19.6659604392971	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGAATGCTTTT	-3	True	NA	NA	False	ATTAAA	-30	NA	66592351	66553319	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_66554838_66560578_66560676_66573384_66573551_66576754_66576930_66592256
H1_mix_00081153	chr7	-	1568	4	NIC	ENSG00000229180.8	novel	2103	6	NA	NA	17	-80	combination_of_known_splicesites	FALSE	canonical	3	8	junction_2	47.5417944783558	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATGGATTTCATTTATT	73	False	NA	0	True	TATAAA	-26	NA	66592316	66553564	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_66554838_66573384_66573551_66588511_66588581_66592256
H1_mix_00081155	chr7	-	202	1	FSM	ENSG00000177418.2	ENST00000325130.2	474	1	38	234	38	-234	mono-exon	FALSE	NA	NA	NA	NA	NA	198	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGGCACCGGCCGCAGC	NA	False	NA	NA	False	NA	NA	NA	66557324	66557122	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_66557100_66557300
H1_mix_00081156	chr7	-	535	2	NIC	ENSG00000229180.8	novel	635	3	NA	NA	1	23	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTGTCATGCACATTTT	16	True	NA	20	True	AATATA	-40	NA	66592332	66584007	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_66584467_66592256
H1_mix_00081157	chr7	-	214	1	FSM	ENSG00000225573.4	ENST00000433398.1	370	1	135	21	135	-21	mono-exon	FALSE	NA	NA	NA	NA	NA	832	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGAGCGGTCAAGGCCTG	NA	False	NA	NA	False	NA	NA	NA	66606972	66606758	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_66606800_66607000
H1_mix_00081158	chr7	-	736	1	FSM	ENSG00000272831.1	ENST00000607978.1	557	1	-192	13	-192	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCGTCCTGAATGCCATG	36	False	NA	69	True	AGTAAA	-11	NA	66740577	66739841	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_66739800_66740600
H1_mix_00081159	chr7	-	1681	6	NNC	ENSG00000126524.11	novel	1613	5	NA	NA	-56	55887	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	107.95628745006	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGAAGGCCTCCTGGTTG	NA	False	NA	NA	False	NA	NA	NA	66995642	66931792	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_66931823_66987697_66988500_66991136_66991302_66993216_66993418_66994211_66994342_66995289
H1_mix_00081162	chr7	-	1647	12	FSM	ENSG00000106133.18	ENST00000485741.6	1647	12	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	172.318607466921	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	10	False	NA	-8	True	AATAAA	-18	NA	72954720	72948297	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_72948598_72948667_72948809_72948891_72948981_72949052_72949103_72949312_72949492_72949845_72949962_72950057_72950197_72952151_72952296_72953325_72953431_72953510_72953678_72954358_72954480_72954624
H1_mix_00081163	chr7	-	1766	11	FSM	ENSG00000106133.18	ENST00000388955.8	1789	11	23	0	23	0	multi-exon	FALSE	canonical	3	43	junction_9	170.414905451372	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	NA	False	NA	-8	True	AATAAA	-18	NA	72954767	72948297	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_72948598_72948667_72948809_72948891_72949103_72949312_72949492_72949845_72949962_72950057_72950197_72952151_72952296_72953325_72953431_72953510_72953678_72954358_72954480_72954624
H1_mix_00081165	chr7	-	986	6	NNC	ENSG00000106133.18	novel	1647	12	NA	NA	4507	-4	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_1	181.475728404655	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCAGAGGCTCCGGGCTC	4531	False	NA	NA	False	AAAAAG	-32	NA	72950199	72948488	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_72948598_72948667_72948809_72948891_72948981_72949102_72949492_72949845_72949962_72950057
H1_mix_00081168	chr7	-	704	1	FSM	ENSG00000276178.1	ENST00000364992.2	102	1	72	-674	72	674	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTATGGTCTACTCCA	NA	False	NA	NA	False	AATAAA	-32	NA	72983389	72982685	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_72982700_72983400
H1_mix_00081169	chr7	-	1615	7	ISM	ENSG00000174353.17	ENST00000608210.5	1067	8	607	-648	607	-320	3prime_fragment	FALSE	canonical	3	36	junction_1	30.99327884128	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGATCTCAGCCCACTGCA	2818	False	NA	59	True	NA	NA	NA	73003123	72997378	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_72998365_72998675_72998791_72999054_72999163_72999470_72999551_72999760_72999860_73000357_73000482_73003020
H1_mix_00081173	chr7	-	714	5	FSM	ENSG00000106635.8	ENST00000463858.5	714	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	156.461456915114	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGAAGAGGAGCGCTCATG	792	False	NA	NA	False	GGGGCT	-45	NA	73557211	73537100	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_73537391_73537933_73538014_73543547_73543645_73552166_73552243_73557040
H1_mix_00081176	chr7	-	708	2	FSM	ENSG00000106638.18	ENST00000488915.1	708	2	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATCTGGCCTCCTCATGGC	7313	False	NA	NA	False	NA	NA	NA	73571394	73570470	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_73570973_73571188
H1_mix_00081177	chr7	-	1066	6	FSM	ENSG00000106638.18	ENST00000452475.5	1262	6	0	196	0	-196	multi-exon	FALSE	canonical	2	6	junction_1	73.0769457489843	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTTTTTTTTTTCT	-26	True	NA	NA	False	NA	NA	NA	73578634	73571779	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_73572036_73572843_73572971_73573319_73573472_73573937_73574123_73574382_73574514_73578419
H1_mix_00081181	chr7	-	2884	16	ISM	ENSG00000009950.16	ENST00000313375.8	3252	17	8390	0	29	0	3prime_fragment	FALSE	canonical	3	13	junction_13	13.3389987963448	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTTTGTTGGTGTGCT	8435	False	NA	-18	True	AATAAA	-14	NA	73616132	73593201	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_73593984_73594273_73594404_73595636_73595761_73595841_73595970_73596152_73596273_73596363_73596480_73596638_73596790_73596864_73596933_73597181_73597714_73599525_73599696_73605687_73605769_73605909_73606112_73606973_73607019_73607330_73607421_73607589_73607673_73616070
H1_mix_00081182	chr7	-	774	4	FSM	ENSG00000009950.16	ENST00000467221.1	774	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	14.6590889515307	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCCCAGCCCAGCCTCAA	6113	False	NA	NA	False	NA	NA	NA	73597362	73596173	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_73596273_73596363_73596790_73596864_73596933_73597181
H1_mix_00081184	chr7	-	1646	2	FSM	ENSG00000106089.12	ENST00000484736.5	928	2	0	-718	0	165	multi-exon	FALSE	canonical	3	46	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAACCTGAGGATGAATG	2917	False	NA	NA	False	NA	NA	NA	73700931	73699040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_73700485_73700729
H1_mix_00081197	chr7	-	2087	8	FSM	ENSG00000277072.5	ENST00000426587.5	2130	8	43	0	-1	0	multi-exon	FALSE	canonical	3	24	junction_3	26.5160713684423	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTGGAAGCCCCATTGT	-2	True	NA	-25	True	AGTAAA	-16	NA	74890567	74882162	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_74883464_74883727_74883836_74884143_74884224_74884433_74884525_74885022_74885147_74887682_74887800_74888311_74888398_74890387
H1_mix_00081200	chr7	-	1625	9	FSM	ENSG00000274523.5	ENST00000616051.1	1610	9	0	-15	0	15	multi-exon	FALSE	canonical	3	345	junction_5	16.3075902573004	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTGATTAGGAAGTGAATG	27	True	NA	NA	False	NA	NA	NA	75073790	75055559	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_75056075_75057528_75057617_75058587_75058770_75061206_75061292_75063291_75063344_75064581_75064649_75066663_75066793_75070639_75070770_75073413
H1_mix_00081202	chr7	-	3271	4	FSM	ENSG00000277053.4	ENST00000618412.4	2990	4	-279	-2	-279	2	multi-exon	FALSE	canonical	3	1930	junction_3	158.379993124833	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATTGCTCTCTCGGCTGT	NA	False	NA	NA	False	AATAAA	-27	NA	75191812	75185382	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_75187296_75188074_75188117_75189214_75189257_75190538
H1_mix_00081203	chr7	-	2844	3	FSM	ENSG00000277053.4	ENST00000621948.4	2844	3	0	0	0	0	multi-exon	FALSE	canonical	3	1972	junction_2	156.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATCATTTAAA	NA	False	NA	NA	False	AAGAAA	-40	NA	75190836	75186115	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_75187296_75188074_75188117_75189214
H1_mix_00081210	chr7	-	8104	32	NNC	ENSG00000127946.17	novel	8009	31	NA	NA	-27412	35189	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	26.9790838936747	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTAGGAGCATCTGGTGGG	-31	True	NA	NA	False	AAAAAG	-2	NA	75639255	75498108	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_75498140_75533297_75538225_75539322_75539432_75541918_75541981_75542850_75542975_75544694_75544801_75545087_75545189_75546938_75547033_75547754_75547814_75548890_75549002_75553452_75553590_75554112_75554221_75554439_75554527_75555415_75555552_75556025_75556170_75556709_75556812_75557653_75557771_75558166_75558256_75559731_75559916_75561328_75561402_75562072_75562171_75562934_75563076_75563187_75563264_75568198_75568257_75573760_75573902_75581236_75581299_75582074_75582152_75586752_75586834_75592055_75592113_75592371_75592515_75599183_75599248_75639050
H1_mix_00081212	chr7	-	984	4	NNC	ENSG00000006606.9	novel	703	4	NA	NA	7776	11	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	82.7566714329828	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTTTGTCCATAAAACC	7662	False	NA	5	True	AATAAA	-30	NA	75782120	75769521	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_75769790_75771888_75772004_75772103_75772255_75781670
H1_mix_00081218	chr7	-	953	7	FSM	ENSG00000127952.17	ENST00000340062.9	953	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	86.4073042180013	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGCCTCCTGTACTGAT	-7	True	NA	-5	True	NA	NA	NA	76047983	75996341	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_75996600_76000889_76001003_76003757_76003856_76005258_76005405_76028641_76028704_76030420_76030525_76047811
H1_mix_00081220	chr7	-	1210	9	NIC	ENSG00000127952.17	novel	1415	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	164	junction_8	33.1096662622866	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGCCTCCTGTACTGAT	24	True	NA	-5	True	NA	NA	NA	76047952	75996341	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_75996600_76000889_76001003_76003757_76003856_76005258_76005405_76013741_76013888_76021850_76021993_76028641_76028704_76030420_76030525_76047811
H1_mix_00081222	chr7	-	414	1	FSM	ENSG00000231087.2	ENST00000429043.1	1054	1	510	130	510	-130	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCAGCCGTGTTCTTGCA	NA	False	NA	NA	False	NA	NA	NA	76968740	76968326	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_76968300_76968700
H1_mix_00081223	chr7	-	300	1	NIC	ENSG00000205482.11	novel	3077	9	NA	NA	1947	-9921	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACGAAGGAAGGGGGCCG	NA	False	NA	NA	False	NA	NA	NA	77060611	77060311	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_77060300_77060600
H1_mix_00081224	chr7	-	917	1	FSM	ENSG00000213542.3	ENST00000453064.1	794	1	-95	-28	-95	28	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAATTAAAATAATTAA	6027	False	NA	NA	False	ACTAAA	-38	NA	77116287	77115370	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_77115400_77116300
H1_mix_00081226	chr7	-	907	3	NNC	ENSG00000135211.6	novel	877	2	NA	NA	0	53990	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	159	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATTTTTTTTTTTTTTTT	-30	True	NA	NA	False	AAAAAG	-2	NA	77798434	77739737	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_77739769_77793728_77794424_77798253
H1_mix_00081227	chr7	-	906	3	NNC	ENSG00000135211.6	novel	877	2	NA	NA	0	53990	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	159	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATTTTTTTTTTTTTTTT	-30	True	NA	NA	False	AAAAAG	-2	NA	77798434	77739737	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_77739769_77793729_77794424_77798253
H1_mix_00081228	chr7	-	6438	20	NIC	ENSG00000187391.22	novel	6704	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	15	junction_9	13.6588834445905	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGGCTGTGTGTTAATTT	5	True	NA	-1	True	AATAAA	-35	NA	78771122	78017056	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_78019977_78078946_78079086_78125693_78125838_78127196_78127417_78132888_78133061_78135020_78135207_78160024_78160274_78167915_78168109_78178010_78178103_78194873_78195064_78201161_78201194_78255942_78256582_78343777_78343961_78345921_78346044_78369155_78369214_78489760_78489841_78501576_78501788_78521429_78521646_78627119_78627240_78770850
H1_mix_00081231	chr7	-	2038	8	NIC	ENSG00000187391.22	novel	2013	9	NA	NA	41	0	intron_retention	FALSE	canonical	0	0	junction_7	21.0984088770423	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTGTTTTTGAATTCA	39	False	NA	-21	True	AATAAA	-37	NA	78568323	78255788	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_78256582_78343777_78343961_78345921_78346044_78369155_78369214_78489760_78489841_78501576_78501788_78521429_78521646_78567948
H1_mix_00081232	chr7	-	402	5	FSM	ENSG00000153956.16	ENST00000475237.5	419	5	0	17	0	-17	multi-exon	FALSE	canonical	3	44	junction_3	4.55521678957215	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTAAAAGTTAATTGATAAA	7550	False	NA	NA	False	NA	NA	NA	82032901	82007678	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_82007757_82012153_82012244_82013460_82013511_82014400_82014480_82032796
H1_mix_00081235	chr7	-	8733	20	NIC	ENSG00000164659.15	novel	6796	22	NA	NA	-11	0	intron_retention	FALSE	canonical	2	12	junction_19	45.6624372076782	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTTTCAGTTAAATTT	13	True	NA	-14	True	AATAAA	-23	NA	87059642	86876905	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_86880531_86891723_86891890_86892921_86893101_86897505_86897633_86907669_86907772_86908446_86908544_86909811_86912246_86912940_86913205_86914722_86914861_86918441_86918545_86919219_86919311_86925527_86925657_86926735_86926917_86938125_86938215_86938807_86938961_86940009_86940116_86942017_86942105_86944898_86945047_86947726_86947923_87059324
H1_mix_00081239	chr7	-	498	4	FSM	ENSG00000075303.13	ENST00000491499.1	499	4	0	1	0	-1	multi-exon	FALSE	canonical	2	6	junction_1	25.4950975679639	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGTACTAATTGCCCT	0	True	NA	NA	False	AAAACA	-16	NA	87876305	87856291	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_87856390_87858630_87858752_87860571_87860641_87876095
H1_mix_00081240	chr7	-	224	3	ISM	ENSG00000075303.13	ENST00000444363.5	702	6	122	5898	70	-3864	5prime_fragment	FALSE	canonical	3	9	junction_1	28.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGATCTTGGCTCATTGCA	-8	True	NA	NA	False	NA	NA	NA	87876235	87860154	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_87860170_87860571_87860641_87876095
H1_mix_00081242	chr7	-	4179	2	FSM	ENSG00000127989.14	ENST00000425936.1	720	2	224	-3683	0	-42	multi-exon	FALSE	canonical	3	151	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCAAGATATCATTGCTAG	263	False	NA	NA	False	NA	NA	NA	91880439	91870970	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_91874765_91880054
H1_mix_00081243	chr7	-	469	2	FSM	ENSG00000127989.14	ENST00000481516.1	469	2	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTTGAACTATGCAAGGTA	263	False	NA	NA	False	AAAACA	-3	NA	91880439	91876894	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_91876979_91880054
H1_mix_00081244	chr7	-	3744	12	ISM	ENSG00000001631.17	ENST00000686149.1	5006	13	2393	-7	-458	0	3prime_fragment	FALSE	canonical	3	72	junction_4	17.2224147623942	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCAGAGATATAGTCATAT	9786	False	NA	NA	False	AATAAA	-19	NA	92236341	92199412	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_92200805_92201306_92201424_92213194_92213402_92213891_92213980_92214610_92214778_92221901_92222054_92222821_92222979_92225719_92225828_92226525_92226683_92234448_92234593_92234807_92234924_92235402
H1_mix_00081245	chr7	-	4158	20	NIC	ENSG00000001631.17	novel	4762	20	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	32.6125581236496	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAAATAAGTTCAGAGATA	36	True	NA	NA	False	AATAAA	-10	NA	92245870	92199421	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_92200805_92201306_92201424_92213194_92213402_92213891_92213980_92214610_92214778_92221901_92222054_92222821_92222979_92225719_92225828_92226525_92226683_92234448_92234593_92234807_92234924_92235402_92235647_92236412_92236543_92237666_92237760_92240992_92241153_92242033_92242138_92244001_92244150_92244901_92245135_92245426_92245596_92245789
H1_mix_00081246	chr7	-	561	5	ISM	ENSG00000001631.17	ENST00000693563.1	3273	16	6549	26194	268	7724	internal_fragment	FALSE	canonical	1	2	junction_4	46.19185534269	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGGAAGAAGCTGCAAAAT	9947	False	NA	NA	False	ATTAAA	-28	NA	92235615	92225765	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_92225828_92226525_92226683_92234448_92234593_92234807_92234924_92235533
H1_mix_00081250	chr7	-	4058	24	FSM	ENSG00000127980.16	ENST00000484913.5	4051	24	0	-7	0	0	multi-exon	FALSE	canonical	2	8	junction_21	38.5015159400073	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTAATACTGTAGTATAAA	-1	True	NA	NA	False	NA	NA	NA	92528439	92487289	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_92487542_92489292_92489424_92489713_92489912_92491271_92491503_92492952_92493130_92494292_92494397_92494486_92494630_92496712_92496778_92499703_92499839_92501506_92501674_92501889_92502080_92503040_92503196_92504731_92504903_92506247_92506345_92506993_92507127_92509328_92509412_92510943_92511048_92511579_92511704_92513847_92513968_92517275_92518043_92518140_92518256_92518959_92519079_92522101_92522246_92528306
H1_mix_00081251	chr7	-	427	3	FSM	ENSG00000127980.16	ENST00000476923.1	427	3	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	13	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTTGCATTGTGAAGTGT	3584	False	NA	-1	True	AATAAA	-19	NA	92513967	92510864	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_92511048_92511579_92511704_92513847
H1_mix_00081252	chr7	-	1974	7	NNC	ENSG00000234545.8	novel	2367	11	NA	NA	0	6362	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	271.094950565705	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGTGTAATCCTTTTTT	9246	False	NA	NA	False	NA	NA	NA	92577717	92554395	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_92554444_92560790_92562369_92566013_92566062_92569822_92569916_92575770_92575822_92577102_92577196_92577654
H1_mix_00081253	chr7	-	1663	7	NNC	ENSG00000234545.8	novel	2367	11	NA	NA	0	6362	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	271.094950565705	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGTGTAATCCTTTTTT	9246	False	NA	NA	False	NA	NA	NA	92577717	92554395	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_92554445_92561102_92562369_92566013_92566062_92569822_92569916_92575770_92575822_92577102_92577196_92577654
H1_mix_00081254	chr7	-	2367	11	FSM	ENSG00000234545.8	ENST00000445716.6	2367	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	221.763026674872	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAACTTACAAAGATAAAC	1	True	NA	19	True	NA	NA	NA	92590390	92560757	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_92562369_92566013_92566062_92569822_92569916_92575770_92575822_92577102_92577196_92577654_92577718_92578149_92578183_92578318_92578394_92579316_92579396_92581505_92581604_92590267
H1_mix_00081256	chr7	-	2823	11	FSM	ENSG00000234545.8	ENST00000427372.5	931	11	39	-1931	-1	407	multi-exon	FALSE	canonical	0	0	junction_1	234.104869663149	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGGCAACACTTTTTTCT	18	True	NA	NA	False	NA	NA	NA	92590031	92560350	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_92562369_92566013_92566062_92569822_92569916_92575770_92575822_92577102_92577196_92577654_92577718_92578149_92578183_92578318_92578394_92579316_92579396_92581505_92581604_92589859
H1_mix_00081258	chr7	-	809	4	FSM	ENSG00000127990.19	ENST00000645665.1	805	4	0	-4	0	0	multi-exon	FALSE	canonical	3	172	junction_3	39.0213616710984	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGGTGAAATTTACTTCA	NA	False	NA	-14	True	AATAAA	-40	NA	94599979	94585222	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696
H1_mix_00081260	chr7	-	1740	12	FSM	ENSG00000127990.19	ENST00000646489.1	1733	12	0	-7	0	0	multi-exon	FALSE	canonical	2	4	junction_11	83.90303336748	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGGTGAAATTTACTTCA	-20	True	NA	-14	True	AATAAA	-40	NA	94656140	94585222	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94629718_94629842_94639340_94639449_94655989
H1_mix_00081264	chr7	-	556	1	FSM	ENSG00000232385.2	ENST00000411660.1	793	1	146	91	146	-91	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGTAGTTCTGGAAAAGC	163	False	NA	NA	False	NA	NA	NA	94695673	94695117	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_94695100_94695700
H1_mix_00081265	chr7	-	2378	5	ISM	ENSG00000105854.13	ENST00000222572.8	1610	9	22037	0	-1288	0	intron_retention	FALSE	canonical	3	407	junction_3	41.4155767797576	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTCTGTGTTTAATTC	NA	False	NA	NA	False	ATTAAA	-37	NA	95412991	95404861	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_95405489_95406118_95406248_95406986_95407069_95409900_95410102_95411652
H1_mix_00081269	chr7	-	3191	18	FSM	ENSG00000004864.14	ENST00000416240.6	3192	18	0	1	0	-1	multi-exon	FALSE	canonical	3	34	junction_9	111.549576236208	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGAGTTGTTTGGTCTTG	4628	False	NA	-5	True	AATAAA	-14	NA	96322147	96120221	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_96121378_96121654_96121746_96121838_96121998_96131742_96131882_96146555_96146697_96170044_96170126_96171471_96171525_96184276_96184436_96184926_96185015_96189293_96189379_96189580_96189675_96191108_96191248_96193036_96193184_96208837_96208978_96234801_96234918_96277195_96277339_96296897_96296952_96321941
H1_mix_00081271	chr7	-	432	3	FSM	ENSG00000004864.14	ENST00000492869.1	433	3	0	1	0	-1	multi-exon	FALSE	canonical	3	499	junction_1	53	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTACCTTTTGAAGCTC	4977	False	NA	NA	False	NA	NA	NA	96184574	96170044	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_96170126_96171471_96171525_96184276
H1_mix_00081272	chr7	-	584	3	FSM	ENSG00000070669.17	ENST00000414884.1	584	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	305.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGCATTCCGTTTTGAG	5	True	NA	NA	False	NA	NA	NA	97872158	97869071	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_97869180_97869777_97869814_97871718
H1_mix_00081274	chr7	-	260	1	FSM	ENSG00000238228.1	ENST00000455678.1	1012	1	660	92	660	-92	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGCCTGAGAAACAGGGA	NA	False	NA	NA	False	NA	NA	NA	97947338	97947078	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_97947100_97947300
H1_mix_00081280	chr7	-	2877	8	FSM	ENSG00000166448.15	ENST00000416379.6	2881	8	0	4	0	-2	multi-exon	FALSE	canonical	1	1	junction_1	8.90310654336165	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACGGTGTGGCCAGAGTC	9185	False	NA	NA	False	AATAAA	-29	NA	98869866	98846491	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_98848245_98848582_98848696_98851420_98851624_98855239_98855325_98856016_98856184_98860178_98860339_98863094_98863401_98869776
H1_mix_00081282	chr7	-	767	6	FSM	ENSG00000106244.13	ENST00000426447.3	767	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	306.385769904544	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGGGATGGGGGGGGGGA	-4	True	NA	NA	False	NA	NA	NA	99408590	99396522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_99396741_99397861_99398014_99400302_99400425_99403397_99403526_99404861_99404954_99408535
H1_mix_00081283	chr7	-	533	2	FSM	ENSG00000106246.18	ENST00000419981.1	533	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGTTCCATAACCTGCG	7	True	NA	NA	False	NA	NA	NA	99438755	99434924	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_99435269_99438566
H1_mix_00081286	chr7	-	342	1	FSM	ENSG00000224448.1	ENST00000455459.1	526	1	314	-130	314	130	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGGGGAGAGGGCTTGG	NA	False	NA	NA	False	NA	NA	NA	99638453	99638111	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_99638100_99638500
H1_mix_00081287	chr7	-	2849	5	NIC	ENSG00000166526.18	novel	999	6	NA	NA	-16	-2	combination_of_known_splicesites	FALSE	canonical	2	9	junction_4	83.868945385047	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATTGAGTGTGGTTTTGT	7482	False	NA	-4	True	ATTAAA	-19	NA	100082564	100069974	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_100072213_100075134_100075262_100075541_100075631_100077302_100077434_100082300
H1_mix_00081288	chr7	-	2660	3	FSM	ENSG00000166526.18	ENST00000487620.1	2660	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	87.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAAAACA	1	True	NA	5	True	NA	NA	NA	100081762	100070176	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100072213_100075134_100075631_100081634
H1_mix_00081293	chr7	-	1578	7	FSM	ENSG00000166508.18	ENST00000425308.5	1497	7	0	-81	0	0	multi-exon	FALSE	canonical	3	50	junction_6	445.799188723652	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACCCCAAACAAAACAGA	1053	False	NA	NA	False	NA	NA	NA	100100869	100098058	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100098291_100098577_100098716_100099022_100099204_100099278_100099404_100099588_100099754_100100013_100100094_100100212
H1_mix_00081301	chr7	-	2567	11	NNC	ENSG00000213420.8	novel	2546	10	NA	NA	0	48489	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	38.789818251701	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	-7	True	NA	NA	False	NA	NA	NA	100177369	100121116	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_100121150_100169605_100170484_100171260_100171437_100171538_100171679_100171778_100171926_100172086_100172218_100173834_100173998_100174684_100174766_100175571_100175895_100176206_100176366_100177033
H1_mix_00081302	chr7	-	1156	2	FSM	ENSG00000146826.17	ENST00000470260.1	1103	2	0	-53	0	1	multi-exon	FALSE	canonical	3	69	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATGACTAGTTTGTGTA	3029	False	NA	-4	True	ATTAAA	-19	NA	100155674	100154421	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100155165_100155261
H1_mix_00081303	chr7	-	1515	4	FSM	ENSG00000213420.8	ENST00000471717.1	2129	4	0	614	0	-614	multi-exon	FALSE	canonical	3	86	junction_1	20.8326666559997	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCCCAGCACCAAGCCAG	-10	True	NA	NA	False	NA	NA	NA	100177372	100174071	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100174766_100175571_100175895_100176206_100176366_100177033
H1_mix_00081305	chr7	-	796	6	FSM	ENSG00000078319.11	ENST00000675610.2	837	6	45	-4	-1	3	multi-exon	FALSE	canonical	3	13	junction_1	100.002799960801	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTCCGGTGTTCTGGAA	19	False	NA	4	True	AATAAA	-27	NA	100335939	100320904	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100321085_100328835_100329020_100330181_100330285_100330462_100330550_100332441_100332582_100335837
H1_mix_00081306	chr7	-	775	7	FSM	ENSG00000078319.11	ENST00000686797.1	857	7	79	3	0	0	multi-exon	FALSE	canonical	3	10	junction_3	99.6316828233982	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCCCCTGGGTCCGGTG	68	False	NA	-4	True	AATAAA	-19	NA	100335890	100320912	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100321085_100325690_100325780_100328835_100329020_100330234_100330285_100330462_100330550_100332441_100332582_100335837
H1_mix_00081307	chr7	-	747	6	FSM	ENSG00000078319.11	ENST00000674972.2	779	6	29	3	0	0	multi-exon	FALSE	canonical	3	130	junction_1	63.1778442177319	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCCAGTTTCCAGTAGTT	8	True	NA	NA	False	ATTAAA	-18	NA	100335950	100325659	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100325780_100328835_100329020_100330181_100330285_100330462_100330550_100332441_100332582_100335837
H1_mix_00081308	chr7	-	942	3	FSM	ENSG00000160813.7	ENST00000491407.1	942	3	0	0	0	0	multi-exon	FALSE	canonical	3	480	junction_2	148	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAAAGATCCCTGGAGGG	6	True	NA	-40	True	NA	NA	NA	100436473	100435358	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100435534_100435630_100436065_100436140
H1_mix_00081309	chr7	-	1469	5	FSM	ENSG00000166925.9	ENST00000393991.5	1469	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	48.0884601541784	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTCTGAAGAAACTTGAAT	21	False	100479253	-30	True	ATTAAA	-19	NA	100479232	100466537	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100467169_100467551_100467601_100474273_100474441_100477276_100477460_100478793
H1_mix_00081313	chr7	-	4754	9	FSM	ENSG00000077454.17	ENST00000467201.5	4754	9	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_6	28.2109796887666	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGCCCTGCCTGTGTGTGT	5311	False	NA	-9	True	TATAAA	-15	NA	100580873	100574659	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100575305_100575704_100575783_100575870_100576009_100576237_100576324_100576693_100577006_100577085_100577390_100577496_100577559_100577663_100577741_100577821
H1_mix_00081317	chr7	-	754	2	FSM	ENSG00000224729.6	ENST00000653812.1	754	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAGGGAGGTGGGGTGGT	3310	False	NA	NA	False	NA	NA	NA	100601857	100600336	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100600853_100601619
H1_mix_00081318	chr7	-	2451	16	ISM	ENSG00000106327.13	ENST00000223051.8	2886	18	786	0	748	0	3prime_fragment	FALSE	canonical	2	9	junction_15	5.95165709884417	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCTGTTGACATCTGTT	5783	False	NA	NA	False	AATAAA	-18	NA	100640766	100620419	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_100621127_100626762_100626904_100627263_100627492_100627576_100627662_100627743_100627821_100627906_100627975_100628072_100628137_100628223_100628307_100629252_100629373_100630888_100631053_100631805_100631946_100632081_100632199_100633000_100633124_100633228_100633341_100633415_100633557_100640685
H1_mix_00081320	chr7	-	5061	16	FSM	ENSG00000196411.10	ENST00000487222.5	5058	16	0	-3	0	0	multi-exon	TRUE	canonical	3	458	junction_9	36.5200705853036	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGGGGTGATGGACTAGA	1993	False	NA	-9	True	AATAAA	-32	NA	100825526	100802564	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100803591_100805165_100805322_100805500_100805695_100806419_100806570_100807364_100807581_100812746_100812995_100813094_100813209_100813651_100813717_100813918_100814022_100817191_100817358_100818519_100818645_100819556_100819890_100820140_100820297_100822270_100822668_100823643_100823932_100824202
H1_mix_00081321	chr7	-	625	3	FSM	ENSG00000196411.10	ENST00000467515.1	709	3	84	0	84	0	multi-exon	FALSE	canonical	3	517	junction_2	9	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGCTGGGGGTAATACT	9609	False	NA	NA	False	NA	NA	NA	100813255	100807364	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100807581_100812746_100812995_100813094
H1_mix_00081325	chr7	-	1555	1	ISM	ENSG00000128564.8	ENST00000249330.3	2551	2	1506	0	1051	0	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTCTCGGTTATTCAC	9348	False	NA	-1	True	AATAAA	-20	NA	101164063	101162508	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_101162500_101164100
H1_mix_00081329	chr7	-	550	2	FSM	ENSG00000106397.12	ENST00000481461.1	564	2	14	0	14	0	multi-exon	FALSE	canonical	1	1	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGGCGTAGCCCCAGCCA	5186	False	NA	NA	False	NA	NA	NA	101218352	101217422	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_101217900_101218279
H1_mix_00081332	chr7	-	1005	5	FSM	ENSG00000214253.9	ENST00000473527.5	1005	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	262.356984850794	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCGTGTCTGCGTTGAGG	8	True	NA	-1	True	AATAAA	-21	NA	101252291	101239611	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_101239904_101240141_101240248_101240829_101240907_101244006_101244140_101251894
H1_mix_00081333	chr7	-	861	4	NIC	ENSG00000128581.17	novel	1657	6	NA	NA	252	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	119.06954083877	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGCTTGAATGTGATTT	266	False	NA	-10	True	NA	NA	NA	101321512	101314787	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_101315283_101316339_101316543_101318955_101319033_101321426
H1_mix_00081335	chr7	-	1405	3	FSM	ENSG00000160993.4	ENST00000490528.1	1405	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	66	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGAACATTTTAAATGATT	-6	True	NA	NA	False	NA	NA	NA	102464863	102456833	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_102457982_102459603_102459711_102464713
H1_mix_00081336	chr7	-	533	2	FSM	ENSG00000160993.4	ENST00000498283.1	549	2	0	16	0	-16	multi-exon	FALSE	canonical	3	157	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGCACCCCATCTCCCT	0	True	NA	NA	False	NA	NA	NA	102464857	102459412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_102459802_102464713
H1_mix_00081337	chr7	-	5736	16	NNC	ENSG00000170667.15	novel	2794	20	NA	NA	10783	-14	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	23.3079862326676	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATTACTACAAACTAATG	5720	False	NA	-16	True	AATAAA	-3	NA	102506972	102479989	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_102483714_102483824_102483890_102485038_102485160_102488462_102488599_102493115_102493286_102493824_102493970_102494537_102494676_102494880_102495074_102495277_102495391_102496139_102496204_102496457_102496620_102496846_102496965_102500698_102500794_102501095_102501228_102503162_102503245_102506694
H1_mix_00081338	chr7	-	2877	7	NNC	ENSG00000284981.1	novel	1005	6	NA	NA	-312	12472	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	160.641076800287	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGAAAATGTCCGCGTCTA	1142	False	NA	NA	False	AATAAA	-25	NA	102544161	102525944	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_102527007_102537918_102538526_102539605_102539727_102540014_102540092_102541092_102541304_102541500_102541663_102543524
H1_mix_00081340	chr7	-	542	2	FSM	ENSG00000105808.19	ENST00000520577.1	542	2	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAAGGTGCGGGCCTTGC	NA	False	NA	NA	False	NA	NA	NA	102594460	102593713	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_102593845_102594049
H1_mix_00081341	chr7	-	355	4	FSM	ENSG00000105808.19	ENST00000522443.5	558	4	0	203	0	-203	multi-exon	FALSE	canonical	3	20	junction_3	18.8738502225228	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTCTCCCTTCCCTCC	7	False	NA	NA	False	NA	NA	NA	102616746	102608760	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_102608823_102609340_102609455_102611085_102611143_102616624
H1_mix_00081342	chr7	-	457	3	FSM	ENSG00000105808.19	ENST00000521892.1	569	3	0	112	0	-112	multi-exon	FALSE	canonical	3	20	junction_2	19.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGGGTGTGCACATGCG	-3	True	NA	NA	False	NA	NA	NA	102616756	102609186	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_102609455_102611085_102611143_102616624
H1_mix_00081343	chr7	-	2622	4	FSM	ENSG00000228049.7	ENST00000333432.8	348	4	-28	-2246	0	1483	multi-exon	FALSE	canonical	3	276	junction_1	416.443140043018	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAATGGCGTGAACCCAGG	2	True	NA	NA	False	NA	NA	NA	102671629	102663884	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_102666164_102667089_102667265_102668914_102669005_102671551
H1_mix_00081344	chr7	-	465	3	ISM	ENSG00000233297.4	ENST00000460726.2	1199	9	1421	4864	1421	-4864	internal_fragment	FALSE	canonical	3	23	junction_1	27.5	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTCCCGGGCTCTGCAT	NA	False	NA	NA	False	AAAAAG	-24	NA	102689048	102686699	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_102686850_102688194_102688365_102688903
H1_mix_00081346	chr7	-	1822	5	FSM	ENSG00000161048.12	ENST00000427257.5	1822	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_4	3.34477204006491	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTTTTTTCCATTCTT	19	False	NA	NA	False	NA	NA	NA	103149560	103103086	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_103103555_103115059_103115175_103119576_103120224_103128482_103128793_103149278
H1_mix_00081353	chr7	-	678	3	FSM	ENSG00000189056.15	ENST00000681315.1	1670	3	551	441	551	-441	multi-exon	FALSE	canonical	2	3	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAATGCTTCTACATGT	NA	False	NA	NA	False	NA	NA	NA	103540455	103535315	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_103535485_103539077_103539328_103540196
H1_mix_00081359	chr7	-	3488	16	FSM	ENSG00000091127.14	ENST00000356362.6	3480	16	0	-8	0	0	multi-exon	FALSE	canonical	3	99	junction_15	75.3548641797964	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAGAATCTTGACCTTGA	9822	False	105522271	1	True	AATAAA	-28	NA	105522258	105456502	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_105457927_105459167_105459260_105462620_105462751_105465312_105465415_105468336_105468464_105470687_105470849_105472131_105472194_105481051_105481178_105482311_105482441_105491539_105491618_105495141_105495254_105502419_105502565_105505954_105506057_105506188_105506274_105508114_105508521_105522051
H1_mix_00081360	chr7	-	618	2	FSM	ENSG00000091127.14	ENST00000478208.1	620	2	0	2	0	-2	multi-exon	FALSE	canonical	3	371	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTGATTCAAGAGTAGCC	NA	False	NA	NA	False	NA	NA	NA	105472188	105470287	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_105470849_105472131
H1_mix_00081361	chr7	-	256	1	FSM	ENSG00000231167.3	ENST00000489612.1	999	1	969	-226	969	226	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAAAGCCTTGTTTTTC	1117	False	NA	NA	False	NA	NA	NA	105582287	105582031	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_105582000_105582300
H1_mix_00081362	chr7	-	6140	12	NIC	ENSG00000146776.15	novel	5707	12	NA	NA	-3	444	combination_of_known_junctions	FALSE	canonical	3	26	junction_9	23.5968200687163	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTCGGGTTTTCATAAAA	4	True	NA	NA	False	AATAAA	-26	NA	105876585	105604327	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_105607894_105610528_105610604_105613861_105614817_105620199_105620322_105624074_105624268_105638352_105638610_105639486_105639570_105642837_105643122_105665065_105665289_105788603_105788709_105875811_105875881_105876377
H1_mix_00081363	chr7	-	1963	4	FSM	ENSG00000146776.15	ENST00000484475.5	1963	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	34.7083083233203	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTTTGATCTGATCTGTT	8654	False	NA	-1	True	ATTAAA	-16	NA	105624266	105613473	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_105614817_105617791_105618098_105620199_105620322_105624074
H1_mix_00081367	chr7	-	2464	10	FSM	ENSG00000105835.13	ENST00000679951.1	2464	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	203.551855861575	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACATCATTTATTAATTT	938	False	NA	-24	True	ATTAAA	-18	NA	106284973	106250042	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_106251194_106253016_106253152_106261587_106261708_106263391_106263618_106268463_106268601_106269153_106269313_106272529_106272659_106274945_106275050_106277022_106277180_106284827
H1_mix_00081369	chr7	-	1745	2	Genic_Genomic	ENSG00000253276.5	novel	6799	1	NA	NA	77	47526	multi-exon	FALSE	non_canonical	0	0	junction_1	0	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATAACACTAAGTTTTTTG	4	True	NA	NA	False	NA	NA	NA	106661081	106606833	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr7_-_106606859_106659361
H1_mix_00081370	chr7	-	2815	1	FSM	ENSG00000253276.5	ENST00000523505.3	6799	1	120	3864	120	-3864	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTGTGATAGGAAGCT	119	False	NA	NA	False	AATAAA	-37	NA	106661038	106658223	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_106658200_106661000
H1_mix_00081371	chr7	-	3153	20	NIC	ENSG00000164597.15	novel	4658	22	NA	NA	16	-1099	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	35.8708826432616	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAATTAGCAGTGTTAGG	11	True	NA	-121	True	TTTAAA	-16	NA	107563904	107202653	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_107203631_107230614_107230692_107236449_107236688_107248395_107248500_107256731_107256795_107258272_107258384_107281299_107281400_107283570_107283733_107298141_107298347_107324439_107324522_107362032_107362111_107362307_107362421_107372594_107372761_107412501_107412633_107527236_107527358_107548110_107548181_107548277_107548333_107554284_107554343_107557975_107558116_107563802
H1_mix_00081372	chr7	-	524	1	FSM	ENSG00000272854.1	ENST00000610269.1	501	1	-96	73	-96	-73	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAAGTTGTTGAGTTTTT	NA	False	NA	NA	False	NA	NA	NA	107580153	107579629	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_107579600_107580200
H1_mix_00081373	chr7	-	3181	2	FSM	ENSG00000241764.5	ENST00000658766.1	3516	2	-455	790	0	-790	multi-exon	FALSE	canonical	3	9	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAGACCAAGAACAATTGAC	528	False	NA	NA	False	ATTAAA	-18	NA	107744050	107740788	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_107743404_107743484
H1_mix_00081375	chr7	-	3567	10	FSM	ENSG00000091136.15	ENST00000678310.1	3682	10	115	0	115	0	multi-exon	FALSE	canonical	1	1	junction_7	92.6750595719618	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTGTACTTGTTACTT	NA	False	NA	-9	True	AATAAA	-21	NA	107941687	107923798	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_107924088_107924229_107924390_107926182_107926360_107929063_107929206_107929411_107929620_107931355_107931501_107932173_107932494_107935414_107935657_107937092_107937278_107939988
H1_mix_00081376	chr7	-	6737	33	FSM	ENSG00000091136.15	ENST00000677485.1	6737	33	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_32	42.0512615001025	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTGTACTTGTTACTT	34	True	NA	-9	True	AATAAA	-21	NA	108003133	107923798	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_107924088_107924229_107924390_107926182_107926360_107929063_107929206_107929411_107929620_107931355_107931501_107932173_107932378_107935414_107935657_107937092_107937278_107939988_107940359_107951225_107951323_107952008_107952224_107953529_107953755_107955466_107955631_107959248_107959481_107959690_107959835_107960444_107960650_107961205_107961330_107961548_107961677_107962904_107963064_107964551_107964688_107972991_107973072_107974985_107975099_107975233_107975414_107975688_107975878_107978046_107978168_107980608_107980812_107986021_107986086_107986174_107986364_107994886_107994961_107998356_107998493_108001557_108002972_108003110
H1_mix_00081377	chr7	-	5556	33	FSM	ENSG00000091136.15	ENST00000677101.1	5556	33	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_30	55.9339733525163	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTGTACTTGTTACTT	1217	False	108003234	-9	True	AATAAA	-21	NA	108003203	107923798	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_107924088_107924229_107924390_107926182_107926360_107929063_107929206_107929411_107929620_107931355_107931501_107932173_107932378_107935414_107935657_107937092_107937278_107939988_107940359_107951225_107951323_107952008_107952224_107953529_107953755_107955466_107955631_107959248_107959481_107959690_107959835_107960444_107960650_107961205_107961330_107961548_107961677_107962904_107963064_107964551_107964688_107972991_107973072_107974985_107975099_107975233_107975414_107975688_107975878_107978046_107978168_107980608_107980812_107986021_107986086_107986174_107986364_107994886_107994961_108001557_108001734_108002848_108002972_108003110
H1_mix_00081387	chr7	-	4261	10	FSM	ENSG00000135241.17	ENST00000426128.6	4268	10	0	7	0	-7	multi-exon	FALSE	canonical	0	0	junction_2	54.7792427119869	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGAACTCTGGCCATGGC	44	True	NA	NA	False	AATACA	-7	NA	108526071	108470428	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_108472676_108479183_108479380_108487944_108487954_108491409_108491468_108496583_108496756_108497482_108497578_108502490_108502643_108514143_108514294_108514435_108515575_108526028
H1_mix_00081388	chr7	-	676	4	NNC	ENSG00000234273.1	novel	388	4	NA	NA	-148	-11819	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_2	6.16441400296898	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTTGTTGTTGTTGTTA	NA	False	NA	-1	True	AATAAA	-19	NA	109597314	109533799	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_109534029_109562744_109562836_109565250_109565333_109597040
H1_mix_00081390	chr7	-	1129	8	NNC	ENSG00000184903.10	novel	1205	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	52.708671787787	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTTGTCACTTGCTGTT	NA	False	NA	-11	True	AATAAA	-28	NA	111562516	110663207	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_110663722_110886592_110886696_110963499_110963566_111417263_111417343_111487237_111487342_111521312_111521450_111561850_111561924_111562463
H1_mix_00081391	chr7	-	239	2	FSM	ENSG00000184903.10	ENST00000437687.2	243	2	0	4	0	2	multi-exon	FALSE	canonical	3	150	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTAACTCAGAAGCATA	NA	False	NA	NA	False	NA	NA	NA	111521447	111487237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_111487342_111521312
H1_mix_00081393	chr7	-	2659	6	FSM	ENSG00000146802.13	ENST00000454074.5	2659	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	55.5604175650256	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTCTCACTTTGTCTTT	-2	True	NA	NA	False	NA	NA	NA	112790393	112767084	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_112767745_112772780_112773056_112775175_112775319_112783697_112784954_112788453_112788545_112790159
H1_mix_00081396	chr7	-	5517	23	FSM	ENSG00000077063.11	ENST00000441556.5	5517	23	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_19	15.662768403114	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTATCTTTCTTACAAAA	4	True	NA	-16	True	AATAAA	-2	NA	117873429	117710862	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_117711783_117718017_117718120_117719503_117719637_117721066_117721131_117724546_117724733_117725051_117725258_117728088_117728268_117734912_117735101_117735268_117735422_117745830_117745931_117746012_117746100_117756554_117756635_117757874_117757971_117760434_117760711_117767058_117767177_117777510_117777766_117780440_117780592_117782861_117782962_117784250_117784455_117791290_117792782_117810764_117810990_117861208_117861317_117873334
H1_mix_00081397	chr7	-	551	6	FSM	ENSG00000106025.9	ENST00000441017.5	551	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	90.1274652922182	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTGGAATTTTTTTCAG	1198	False	NA	NA	False	NA	NA	NA	120857124	120810488	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_120810571_120815728_120815804_120838776_120838913_120840026_120840110_120856697_120856834_120857085
H1_mix_00081403	chr7	-	5541	10	NIC	ENSG00000008311.16	novel	5825	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	3534	junction_4	417.060998587988	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAATTTGTTTGTTTGCTT	9	False	NA	-18	True	ATTAAA	-8	NA	122098862	122073548	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_122078015_122078861_122078951_122079596_122079713_122081499_122081596_122086011_122086180_122091702_122091844_122092842_122092952_122093047_122093159_122098449_122098577_122098744
H1_mix_00081404	chr7	-	5792	24	FSM	ENSG00000008311.16	ENST00000679511.1	5774	24	0	-18	0	0	multi-exon	FALSE	canonical	3	54	junction_23	1717.62972698338	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATTAAATTACAAATGCA	24	True	NA	17	True	NA	NA	NA	122144239	122073564	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_122076608_122077837_122078015_122078861_122078951_122079596_122079713_122081499_122081596_122086011_122086180_122091702_122091844_122092842_122092952_122093047_122093159_122098449_122098577_122098744_122098867_122101370_122101439_122101620_122101681_122113117_122113230_122113597_122113721_122115073_122115223_122116632_122116761_122116878_122116958_122118306_122118454_122118562_122118631_122126374_122126460_122129360_122129538_122133516_122133735_122144160
H1_mix_00081410	chr7	-	4736	28	NIC	ENSG00000081803.17	novel	6065	30	NA	NA	0	75	combination_of_known_junctions	FALSE	canonical	2	8	junction_6	26.7627897196882	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATCTGACTCTGTGTTTTT	-1	True	NA	-2	True	AGTAAA	-30	NA	122886458	122319323	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_122320339_122325476_122325582_122345573_122345682_122360787_122360821_122360929_122361014_122379367_122379443_122387025_122387174_122388582_122388739_122393440_122393583_122407539_122407697_122416060_122416165_122436359_122436381_122438340_122438465_122441511_122441576_122451373_122451476_122471374_122471563_122474380_122474518_122490080_122490282_122491311_122491421_122513248_122513316_122554549_122554690_122581178_122581291_122615180_122615300_122621480_122621718_122629247_122629329_122663236_122663570_122736954_122737069_122885998
H1_mix_00081413	chr7	-	5603	5	FSM	ENSG00000128609.16	ENST00000471770.5	5608	5	8	-3	0	3	multi-exon	FALSE	canonical	2	12	junction_4	922.458671160936	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTGTGTATGTGCGTG	480	False	NA	NA	False	TATAAA	-21	NA	123557772	123536993	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_123542221_123545610_123545677_123550469_123550587_123557403_123557449_123557624
H1_mix_00081418	chr7	-	2677	20	NIC	ENSG00000128513.16	novel	3924	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	16.8460521691051	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTTGGTTTATTGTGG	14	True	NA	-4	True	AATAAA	-18	NA	124929823	124822385	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_124822552_124823796_124824075_124825251_124825358_124827213_124827306_124829253_124829343_124835278_124835415_124840972_124841179_124842806_124842964_124846941_124846999_124851871_124851952_124852971_124853139_124858956_124859113_124863349_124863641_124870910_124871042_124892265_124892381_124897164_124897213_124898260_124898375_124915573_124915647_124928814_124929000_124929793
H1_mix_00081421	chr7	-	208	1	Intergenic	novelGene_1404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTGCCTTCTTATATTA	NA	False	NA	NA	False	NA	NA	NA	125915499	125915291	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_-_125915300_125915500
H1_mix_00081423	chr7	-	478	1	FSM	ENSG00000279265.1	ENST00000623124.1	461	1	-116	99	-116	-99	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATAATAGGGACTCCAAAA	NA	False	NA	NA	False	NA	NA	NA	127350409	127349931	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_127349900_127350400
H1_mix_00081424	chr7	-	5978	5	NIC	ENSG00000048405.11	novel	4473	6	NA	NA	-3	-35	intron_retention	FALSE	canonical	3	14	junction_1	3.03108891324554	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGCACATTATTAAACCT	-16	True	NA	-36	True	ACTAAA	-38	NA	127392721	127370077	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_127375035_127377185_127377330_127386059_127386156_127391496_127391616_127392059
H1_mix_00081425	chr7	-	502	5	FSM	ENSG00000048405.11	ENST00000436992.5	502	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	8.03118920210451	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAGCTAGAACCCATAGA	623	False	NA	NA	False	AATATA	-3	NA	127392118	127374945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_127375035_127377185_127377330_127386059_127386156_127391496_127391616_127392064
H1_mix_00081428	chr7	-	2282	13	FSM	ENSG00000106348.18	ENST00000496200.5	2283	13	0	1	0	-1	multi-exon	FALSE	canonical	3	7	junction_10	66.3749869219489	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCTGTCTGTATGCCCTG	3	True	NA	-4	True	AATAAA	-25	NA	128405948	128392278	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_128393029_128394277_128394362_128394455_128394600_128394888_128395034_128395130_128395275_128396599_128396696_128396931_128397023_128398413_128398614_128400094_128400183_128400332_128400540_128401014_128401117_128403705_128403755_128405766
H1_mix_00081431	chr7	-	955	1	FSM	ENSG00000213280.2	ENST00000393266.2	448	1	-102	-405	-102	405	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAAACAGGGAGAA	NA	False	NA	NA	False	AAAAAG	-19	NA	128570790	128569835	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_128569800_128570800
H1_mix_00081433	chr7	-	1807	7	NIC	ENSG00000135253.16	novel	5098	40	NA	NA	243	-4	intron_retention	FALSE	canonical	3	6	junction_6	5.84284938098603	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAAGGCTTCCTTGTGTGTG	3501	False	NA	-9	True	AGTAAA	-14	NA	128880680	128876868	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_128877312_128877483_128877791_128878557_128878723_128879521_128879624_128879717_128879830_128879912_128880529_128880618
H1_mix_00081436	chr7	-	2483	1	FSM	ENSG00000273329.1	ENST00000608694.1	7083	1	4823	-223	4823	223	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACTTATAAGTGAGAACAT	4832	False	NA	NA	False	NA	NA	NA	129606807	129604324	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_129604300_129606800
H1_mix_00081439	chr7	-	317	1	FSM	ENSG00000106477.20	ENST00000603513.1	2368	1	1572	479	1509	-453	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGGAAGTAGTGGAGGACA	3098	False	NA	NA	False	NA	NA	NA	130399637	130399320	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_130399300_130399600
H1_mix_00081440	chr7	-	454	3	FSM	ENSG00000231721.7	ENST00000443623.5	453	3	0	-1	0	0	multi-exon	FALSE	canonical	2	3	junction_1	2.5	190	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAATCTGTGTTTTGTT	5246	False	NA	-7	True	AATAAA	-16	NA	130984109	130944166	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_130944448_130945719_130945836_130984052
H1_mix_00081443	chr7	-	2469	7	FSM	ENSG00000236753.7	ENST00000648242.1	2279	7	-22	-168	0	168	multi-exon	FALSE	canonical	3	4	junction_2	8.82546819658248	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGCCTCAGCTTCTTC	7	True	NA	-2	True	AATAAA	-16	NA	131327746	131309300	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_131310774_131311129_131311224_131321878_131321932_131323364_131323869_131324302_131324426_131326805_131326896_131327614
H1_mix_00081444	chr7	-	1406	3	FSM	ENSG00000236753.7	ENST00000447904.6	2783	3	1377	0	782	0	multi-exon	FALSE	canonical	3	18	junction_2	5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTAGTCCCAGCTACTC	968	False	NA	NA	False	AATACA	-28	NA	131326935	131322715	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_131323869_131324302_131324426_131326805
H1_mix_00081446	chr7	-	1499	4	FSM	ENSG00000236753.7	ENST00000444245.6	1497	4	0	-2	0	0	multi-exon	FALSE	canonical	3	8	junction_3	4.49691252107735	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCCGTCTCTACTAAAAAT	7	True	NA	NA	False	NA	NA	NA	131327746	131322765	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_131323869_131324251_131324426_131326805_131326896_131327614
H1_mix_00081447	chr7	-	1349	4	FSM	ENSG00000236753.7	ENST00000416220.6	1349	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	8.16496580927726	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCAGCACTTTGGGAGGC	29	True	NA	NA	False	TTTAAA	-41	NA	131327724	131322842	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_131323869_131324302_131324426_131326805_131326896_131327614
H1_mix_00081449	chr7	-	5849	9	NNC	ENSG00000128567.17	novel	5986	9	NA	NA	0	47719	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	835.783427390134	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAAGGATCAGAAACATA	-3	True	NA	NA	False	AAAAAG	-2	NA	131556563	131452542	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_131452571_131500274_131504509_131505867_131506036_131506259_131506322_131506578_131506727_131508950_131509029_131509364_131509586_131510827_131511434_131556259
H1_mix_00081450	chr7	-	5852	9	NNC	ENSG00000128567.17	novel	5986	9	NA	NA	0	47719	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	835.783427390134	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAAGGATCAGAAACATA	-3	True	NA	NA	False	AAAAAG	-2	NA	131556563	131452542	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_131452570_131500270_131504509_131505867_131506036_131506259_131506322_131506578_131506727_131508950_131509029_131509364_131509586_131510827_131511434_131556259
H1_mix_00081453	chr7	-	6287	22	ISM	ENSG00000221866.10	ENST00000321063.9	12959	32	373060	4230	-57903	-4229	3prime_fragment	FALSE	canonical	3	8	junction_21	4.61438154109548	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTGGATTCTTGGTGCAC	NA	False	NA	3	True	TATAAA	-34	NA	132203410	132127569	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_132130575_132133048_132133200_132140598_132140812_132145118_132145289_132146509_132146701_132147899_132148000_132148542_132148647_132159472_132159633_132164141_132164289_132165133_132165201_132168303_132168573_132174777_132174921_132179686_132179922_132180585_132180733_132181380_132181621_132182096_132182191_132185298_132185464_132187470_132187608_132194061_132194180_132198484_132198637_132202645_132202837_132203322
H1_mix_00081454	chr7	-	553	2	FSM	ENSG00000221866.10	ENST00000496550.1	597	2	44	0	44	0	multi-exon	FALSE	canonical	3	21	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGGTGAGTGCTGGGCCA	NA	False	NA	NA	False	NA	NA	NA	132145463	132140603	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_132140812_132145118
H1_mix_00081455	chr7	-	621	1	FSM	ENSG00000237821.1	ENST00000421179.1	1099	1	395	83	395	-83	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACCCAGCAAATATGTCAA	480	False	NA	NA	False	NA	NA	NA	133170119	133169498	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_133169500_133170100
H1_mix_00081456	chr7	-	1037	8	FSM	ENSG00000205060.11	ENST00000470969.2	1033	8	0	-4	0	4	multi-exon	FALSE	canonical	3	284	junction_1	29.8226047672238	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTTGCTTTGGAATTT	-20	True	NA	NA	False	AGTAAA	-18	NA	134316897	134299304	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_134299599_134300151_134300262_134301760_134301822_134302028_134302111_134304804_134304855_134306671_134306775_134309365_134309480_134316674
H1_mix_00081457	chr7	-	1930	9	FSM	ENSG00000085662.14	ENST00000465351.5	1930	9	0	0	0	0	multi-exon	FALSE	canonical	3	1396	junction_5	145.953759800836	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTGCCTCAAATAAAAAG	28	True	NA	-63	True	NA	NA	NA	134459102	134442386	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_134442771_134445237_134445321_134447297_134448062_134448386_134448494_134448996_134449120_134449719_134449798_134450785_134450903_134451585_134451754_134458996
H1_mix_00081462	chr7	-	5671	14	FSM	ENSG00000105875.15	ENST00000682759.1	5709	14	38	0	-6	0	multi-exon	FALSE	canonical	3	26	junction_7	6.81105957574728	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAAAGTTTTCTCTCCC	0	True	NA	NA	False	NA	NA	NA	135211517	135184001	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_135186316_135186971_135188546_135189343_135189453_135193230_135193400_135193577_135193673_135194933_135195085_135196143_135196338_135197992_135198152_135204267_135204434_135205927_135206059_135207119_135207203_135208790_135208999_135209575_135209756_135211379
H1_mix_00081463	chr7	-	5590	14	FSM	ENSG00000105875.15	ENST00000485942.2	5590	14	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_8	12.0054228378176	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATACAGTATTTTAAATAAT	-9	True	NA	NA	False	NA	NA	NA	135211526	135185271	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_135186316_135186971_135187170_135188432_135188546_135189343_135189453_135193230_135193400_135193577_135193673_135194933_135195085_135196143_135196338_135197043_135198152_135204267_135206059_135207119_135207203_135208790_135208999_135209575_135209756_135211379
H1_mix_00081464	chr7	-	3594	15	FSM	ENSG00000105875.15	ENST00000466182.5	3594	15	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_8	11.7023022329378	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGGTCCCCTGATGTCT	-17	True	NA	-25	True	AAAAAG	-9	NA	135211534	135185781	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_135186316_135186971_135187170_135188432_135188546_135189343_135189453_135193230_135193400_135193577_135193673_135194933_135195085_135196143_135196338_135197043_135198152_135204267_135204434_135205927_135206059_135207119_135207203_135208790_135208999_135209575_135209756_135211379
H1_mix_00081466	chr7	-	3552	12	FSM	ENSG00000080802.20	ENST00000541284.6	3538	12	-14	0	11	0	multi-exon	FALSE	canonical	3	35	junction_1	44.845925397893	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGGTTGTCCTTGTTTTT	NA	False	NA	0	True	AATAAA	-22	NA	135510116	135361794	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_135363187_135363853_135364067_135393917_135394416_135395633_135395884_135398168_135398227_135410514_135410649_135413487_135413614_135414330_135414433_135415175_135415263_135422155_135422354_135438157_135438424_135509888
H1_mix_00081467	chr7	-	8216	11	NNC	ENSG00000080802.20	novel	4642	11	NA	NA	0	1779	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_8	50.1613396950281	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCCGTATATGTCAGCTG	17	True	NA	NA	False	AATAAA	-14	NA	135510076	135382510	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_135388895_135393917_135394416_135395633_135395884_135398168_135398227_135410523_135410649_135413487_135413614_135414330_135414433_135415175_135415263_135422221_135422354_135438157_135438424_135509888
H1_mix_00081468	chr7	-	3772	11	FSM	ENSG00000080802.20	ENST00000315544.6	3783	11	11	0	11	0	multi-exon	FALSE	canonical	3	30	junction_1	42.3581161054172	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCCTGTGGAGCTGAGGC	NA	False	NA	89	True	NA	NA	NA	135510116	135387069	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_135388895_135393917_135394416_135395633_135395884_135398168_135398227_135410514_135410649_135413487_135413614_135414330_135414433_135415175_135415263_135422155_135422354_135438157_135438424_135509888
H1_mix_00081470	chr7	-	1706	3	FSM	ENSG00000164707.16	ENST00000478310.1	1720	3	0	14	0	-14	multi-exon	FALSE	canonical	1	2	junction_2	3	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATAAATAAATAATATAGTA	12	False	NA	NA	False	NA	NA	NA	135728174	135707450	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_135708251_135721394_135721524_135727397
H1_mix_00081471	chr7	-	1702	6	FSM	ENSG00000105894.12	ENST00000393083.2	1599	6	-80	-23	-80	0	multi-exon	FALSE	canonical	1	2	junction_2	140.735780809288	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTTTTGTGTTCAATAA	1958	False	NA	NA	False	AATAAA	-24	NA	137343854	137227340	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_137228076_137236143_137236243_137251229_137251392_137253463_137253638_137254858_137254975_137343438
H1_mix_00081473	chr7	-	3738	4	NIC	ENSG00000146858.8	novel	1766	5	NA	NA	313	2138	intron_retention	TRUE	canonical	3	13	junction_3	3.55902608401044	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCATCATGTAGGGTGGTA	318	False	NA	NA	False	AAAACA	-44	NA	139035729	139023567	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_139026834_139028701_139028961_139034542_139034679_139035652
H1_mix_00081474	chr7	-	1170	1	FSM	ENSG00000229677.1	ENST00000429934.1	551	1	-396	-223	-396	223	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGCAGTGAGCCAAGATT	NA	False	NA	NA	False	NA	NA	NA	139050402	139049232	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_139049200_139050400
H1_mix_00081476	chr7	-	2051	5	NNC	ENSG00000188883.5	novel	2158	5	NA	NA	0	2079	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	12.1526746027366	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATTGTGTCTGAAATATC	7	True	NA	-20	True	AATAAA	-30	NA	139483663	139450610	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_139451264_139453337_139453708_139454110_139454215_139479626_139479773_139482885
H1_mix_00081477	chr7	-	2861	11	FSM	ENSG00000059378.13	ENST00000473341.5	2861	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	9.50578771065292	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGATGAAGACTGAAGCTC	-29	True	NA	-13	True	AATAAA	-17	NA	140062933	140023748	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_140024886_140026196_140026349_140027275_140027407_140028612_140028689_140034234_140034332_140041643_140041840_140046883_140047008_140054661_140054764_140056855_140057154_140057898_140058035_140062521
H1_mix_00081479	chr7	-	3278	10	NIC	ENSG00000157800.18	novel	2111	14	NA	NA	-4	-1	combination_of_known_splicesites	FALSE	canonical	3	9	junction_6	211.44476557458	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCCATTTCGTTACTTAA	6	True	NA	NA	False	AATAAA	-17	NA	140398493	140333752	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_140335505_140337283_140337350_140348625_140348768_140351272_140351970_140352061_140352147_140355667_140355765_140369589_140369683_140380281_140380391_140382437_140382597_140398415
H1_mix_00081486	chr7	-	3481	7	FSM	ENSG00000133606.11	ENST00000475010.5	3467	7	0	-14	0	0	multi-exon	FALSE	canonical	3	582	junction_2	84.2746831629892	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTGTTTTTGAAATGTG	172	False	NA	2	True	AATAAA	-34	NA	140479336	140453032	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_140454730_140455094_140455901_140456651_140456867_140459006_140459234_140459706_140459937_140471882_140472012_140479159
H1_mix_00081487	chr7	-	460	3	FSM	ENSG00000133606.11	ENST00000463142.1	460	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	310.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGTGGTGTGGCAGTGC	3	True	NA	NA	False	NA	NA	NA	140455911	140454463	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_140454730_140455094_140455234_140455856
H1_mix_00081492	chr7	-	7537	10	NIC	ENSG00000257093.7	novel	7309	9	NA	NA	0	3888	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	35.7100808812191	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGCATCGCTTCATACTC	2	True	NA	NA	False	NA	NA	NA	141702166	141652839	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_141652884_141656543_141662852_141664171_141664241_141664903_141665055_141665186_141665319_141666286_141666426_141674066_141674221_141685477_141685637_141686558_141686659_141701885
H1_mix_00081493	chr7	-	925	1	FSM	ENSG00000270157.1	ENST00000602609.1	925	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGATTATCTGGTGAG	NA	False	NA	NA	False	ATTAAA	-27	NA	141663846	141662921	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_141662900_141663800
H1_mix_00081494	chr7	-	2672	19	NNC	ENSG00000197993.9	novel	2494	19	NA	NA	0	158	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_11	23.8635524556272	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACCCAGTGGACCAAAGAT	-19	True	NA	NA	False	AAGAAA	-41	NA	142962363	142940955	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_142941414_142942433_142942530_142942874_142943045_142943275_142943344_142943485_142943597_142943782_142943884_142944322_142944401_142944642_142944742_142946206_142946318_142952508_142952639_142953807_142953977_142954183_142954373_142954464_142954528_142957826_142957974_142958303_142958429_142960927_142961105_142961359_142961502_142961794_142961873_142962203
H1_mix_00081495	chr7	-	332	2	FSM	ENSG00000197993.9	ENST00000478969.1	351	2	19	0	19	0	multi-exon	FALSE	canonical	3	101	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTCTTTCGAAGCTATG	819	False	NA	NA	False	NA	NA	NA	142943135	142942458	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_142942530_142942874
H1_mix_00081498	chr7	-	6902	9	NIC	ENSG00000198420.10	novel	3343	9	NA	NA	-1175	2	combination_of_known_splicesites	FALSE	canonical	3	10	junction_8	67.3200146687447	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGACTTCACATTGATTAA	NA	False	NA	NA	False	AATAAA	-19	NA	143886545	143851372	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_143854143_143857073_143857351_143858823_143859162_143860207_143860448_143861094_143861309_143862415_143862514_143862801_143863797_143875988_143876623_143885209
H1_mix_00081499	chr7	-	5665	9	NIC	ENSG00000198420.10	novel	5754	9	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	10	junction_8	67.3200146687447	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAGTGACTTCACATTGA	-24	True	NA	NA	False	AATAAA	-15	NA	143902176	143851376	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_143854143_143857073_143857351_143858823_143859162_143860207_143860448_143861094_143861309_143862415_143862514_143862801_143863797_143875988_143876623_143902073
H1_mix_00081503	chr7	-	393	4	NIC	ENSG00000244479.7	novel	819	6	NA	NA	-16	-1	combination_of_known_junctions	FALSE	canonical	3	111	junction_2	84.3972090112516	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACCCAGTCTGTGATATT	NA	False	NA	NA	False	AATAAA	-17	NA	144355417	144307145	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_144307233_144311590_144311705_144343186_144343299_144355337
H1_mix_00081504	chr7	-	825	6	FSM	ENSG00000244479.7	ENST00000486094.5	819	6	0	-6	0	3	multi-exon	FALSE	canonical	3	44	junction_5	38.1240081838203	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTGTGATATTCTGT	NA	False	NA	NA	False	AATAAA	-21	NA	144355685	144307141	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_144307233_144311590_144311705_144311883_144311937_144343186_144343299_144350717_144350825_144355337
H1_mix_00081506	chr7	-	3819	4	NIC	ENSG00000244479.7	novel	773	4	NA	NA	-6	3146	combination_of_known_splicesites	FALSE	canonical	3	47	junction_3	49.4929849125667	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTCTCTGTGGCCCTAG	NA	False	NA	NA	False	NA	NA	NA	144355225	144333621	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_144336978_144343186_144343299_144350717_144350825_144354981
H1_mix_00081508	chr7	-	737	3	Antisense	novelGene_ENSG00000174469.23_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	22.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTAAGAATCTGCTTTAA	NA	False	NA	-16	True	AATAAA	-18	NA	146248919	146215931	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr7_-_146216306_146238742_146238854_146248667
H1_mix_00081511	chr7	-	3767	19	FSM	ENSG00000106462.12	ENST00000492143.5	3641	19	0	-126	0	0	multi-exon	FALSE	canonical	3	20	junction_10	134.622712390436	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTGAATATGTGGAAGACA	17	True	NA	NA	False	NA	NA	NA	148884283	148807256	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_148807707_148809070_148809156_148809309_148809391_148810332_148810415_148811624_148811721_148813958_148814138_148814913_148815040_148815505_148815547_148816683_148818118_148818977_148819060_148819595_148819688_148826468_148826633_148827163_148827267_148828739_148828881_148829727_148829849_148832633_148832751_148846469_148846599_148847181_148847306_148884163
H1_mix_00081513	chr7	-	2545	20	FSM	ENSG00000106462.12	ENST00000682317.1	2535	20	0	-10	0	0	multi-exon	FALSE	canonical	3	20	junction_12	144.992998207106	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTCAACTTTGAATAAA	31	True	NA	-51	True	NA	NA	NA	148884269	148807419	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_148807707_148809070_148809156_148809309_148809391_148810332_148810415_148811624_148811721_148813958_148814138_148814913_148815040_148815505_148815547_148816683_148816779_148817221_148817392_148817876_148818118_148818977_148819060_148819595_148819688_148826468_148826633_148827163_148827267_148828739_148828881_148829727_148829849_148846469_148846599_148847181_148847306_148884163
H1_mix_00081517	chr7	-	1876	10	FSM	ENSG00000106462.12	ENST00000498186.5	1876	10	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_7	69.1146837233076	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCAAATATTGAACCTCC	13	True	NA	NA	False	AATAAA	-5	NA	148884287	148817356	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_148818118_148819595_148819688_148826468_148826633_148827163_148827267_148828739_148828881_148829727_148829849_148832633_148832751_148846469_148846599_148847181_148847306_148884163
H1_mix_00081519	chr7	-	2776	11	NNC	ENSG00000155660.11	novel	2767	10	NA	NA	0	33305	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1264.21400087169	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGGTGTGCATTTGTA	27	True	NA	NA	False	AAAAAG	-6	NA	149028468	148969756	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_148969794_149003052_149004210_149005140_149005375_149005896_149006054_149008158_149008311_149011845_149012005_149012154_149012361_149014903_149015043_149018991_149019198_149020966_149021148_149028320
H1_mix_00081522	chr7	-	5716	3	ISM	ENSG00000197362.15	ENST00000491431.2	3209	4	9262	-1864	9262	1864	3prime_fragment	FALSE	canonical	3	58	junction_2	25	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGGCTTATTTGGTATT	9323	False	NA	-3	True	TTTAAA	-6	NA	149081456	149067776	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_149072474_149074385_149074539_149080590
H1_mix_00081525	chr7	-	3637	9	FSM	ENSG00000133624.14	ENST00000684939.1	3564	9	-74	1	4	-1	multi-exon	FALSE	canonical	3	16	junction_2	10.4933014347249	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCTGTGTGAGTGTTCT	9	True	NA	-6	True	AATAAA	-14	NA	149624723	149547159	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_149549375_149550867_149550947_149551654_149551827_149552800_149553017_149558607_149558840_149619923_149620038_149621045_149621173_149621259_149621560_149624541
H1_mix_00081529	chr7	-	1639	5	FSM	ENSG00000106538.10	ENST00000466675.5	1618	5	0	-21	0	0	multi-exon	FALSE	canonical	3	2752	junction_3	132.594306061761	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCCAGCTGCCTCTCAG	-1	True	NA	-23	True	AATAAA	-5	NA	150341643	150338336	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_150338440_150338614_150338742_150338985_150339082_150340099_150340205_150340435
H1_mix_00081531	chr7	-	1136	6	FSM	ENSG00000106565.18	ENST00000429904.6	1206	6	84	-14	84	0	multi-exon	FALSE	canonical	3	5	junction_3	2.49799919935936	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATATGGTTTCCCTTTGTTT	6551	False	NA	5	True	AATAAA	-30	NA	150796648	150791286	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_150791624_150792055_150792176_150793087_150793316_150793543_150793601_150793960_150794072_150796365
H1_mix_00081532	chr7	-	2794	4	FSM	ENSG00000055118.17	ENST00000473610.5	2782	4	11	-23	4	22	multi-exon	FALSE	canonical	3	10	junction_3	12.5521135891752	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGTGTTCTGATCTTTG	-8	True	NA	NA	False	AGTAAA	-39	NA	150955817	150949392	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_150950421_150950920_150951836_150952424_150952854_150955395
H1_mix_00081536	chr7	-	1007	11	NNC	ENSG00000164885.13	novel	783	11	NA	NA	17	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	68.0173507275901	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTGATGTGGTGGTCA	4110	False	NA	-4	True	CATAAA	-19	NA	151057877	151053813	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_151054096_151054211_151054293_151054404_151054465_151055025_151055097_151055276_151055374_151055531_151055607_151056579_151056637_151056735_151056797_151056907_151056976_151057071_151057161_151057811
H1_mix_00081546	chr7	-	2415	11	FSM	ENSG00000082014.17	ENST00000469154.5	2415	11	1	-1	1	0	multi-exon	FALSE	canonical	2	2	junction_8	69.5902291992202	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCCGTGTGGTCATTGGA	2173	False	NA	-2	True	ATTAAA	-17	NA	151275251	151238972	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_151239157_151239395_151239498_151239623_151239747_151240111_151240248_151240424_151241654_151241876_151241979_151242136_151242233_151242480_151242604_151242704_151242844_151243658_151243702_151275113
H1_mix_00081552	chr7	-	1786	6	FSM	ENSG00000187260.16	ENST00000621812.2	1542	6	0	-244	0	244	multi-exon	FALSE	canonical	3	12	junction_5	33.0732520324204	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTTGGGAGCAGGGTCA	-6	True	NA	NA	False	NA	NA	NA	151410705	151380876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_151381747_151381877_151381982_151385087_151385224_151395775_151396197_151400099_151400242_151410592
H1_mix_00081553	chr7	-	1698	6	FSM	ENSG00000187260.16	ENST00000469830.2	1691	6	0	-7	0	0	multi-exon	FALSE	canonical	3	7	junction_3	34.960549194771	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGTGTCCTCTTTTTGT	1068	False	NA	-1	True	AATATA	-21	NA	151409631	151381120	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_151381747_151381877_151381982_151385087_151385288_151395775_151396197_151400099_151400242_151409426
H1_mix_00081554	chr7	-	5000	6	NNC	ENSG00000187260.16	novel	2038	6	NA	NA	0	-2	intron_retention	FALSE	canonical	3	7	junction_1	31.7238080942374	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGCTCCTGTGTCCTCTT	-5	True	NA	-6	True	AATATA	-16	NA	151410038	151381125	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_151384653_151385087_151385224_151395775_151396197_151400099_151400242_151408891_151409054_151409426
H1_mix_00081560	chr7	-	15863	44	FSM	ENSG00000055609.21	ENST00000683200.1	15972	44	109	0	109	0	multi-exon	FALSE	canonical	2	7	junction_30	19.4345429647518	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACACAGATTTAGAAGATCA	2998	False	NA	-58	True	NA	NA	NA	152235824	152134976	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_152138905_152139185_152139260_152139674_152139792_152144712_152144882_152145152_152145296_152146598_152146736_152148032_152149153_152150899_152151008_152151441_152151582_152152704_152152955_152154009_152154147_152154266_152154446_152155909_152156058_152156204_152156347_152157760_152157923_152158862_152159073_152162116_152163827_152167145_152167379_152169185_152169250_152171263_152171343_152174130_152174243_152176190_152178011_152179833_152180127_152180710_152182595_152182973_152183157_152185557_152185632_152187261_152187477_152187714_152187848_152194008_152194129_152194228_152194262_152194439_152194569_152195906_152196012_152199278_152199460_152202933_152203065_152205105_152205226_152207299_152207429_152220522_152220736_152222000_152222067_152222572_152222683_152224014_152224180_152224434_152224617_152229922_152230028_152230219_152230322_152235816
H1_mix_00081562	chr7	-	1508	2	FSM	ENSG00000055609.21	ENST00000490130.2	1949	2	439	2	439	-2	multi-exon	FALSE	canonical	3	23	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	152312766	152309536	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_152310076_152311797
H1_mix_00081576	chr7	-	5253	28	FSM	ENSG00000146918.20	ENST00000409339.3	5253	28	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	168.858533659317	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTAGTGTTTTGTTTTTGT	-9	True	NA	NA	False	ATTAAA	-21	NA	158704798	158639795	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_158641555_158644288_158644389_158645518_158645620_158646459_158646564_158650831_158650973_158652292_158652481_158654594_158654695_158655117_158655259_158655338_158655456_158656259_158656434_158656551_158656706_158658337_158658409_158662193_158662368_158664183_158664297_158664527_158664751_158671513_158671667_158675476_158675657_158679959_158680086_158680720_158680817_158683299_158683387_158686171_158686242_158687347_158687443_158689818_158689954_158690567_158690723_158692841_158692957_158693308_158693498_158701821_158701939_158704723
H1_mix_00081577	chr7	-	1926	13	FSM	ENSG00000106018.14	ENST00000402066.5	1926	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	14.068039032581	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGGCAGGTCAGCGCGGT	9	True	NA	-63	True	GGGGCT	-40	NA	159144859	159030517	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_159030790_159031827_159031870_159031937_159032068_159034212_159034305_159034580_159034651_159035951_159036013_159036751_159036903_159043034_159043177_159058480_159058579_159103756_159103855_159109811_159109920_159142445_159142546_159144297
H1_mix_00081578	chr7	+	339	1	Intergenic	novelGene_1333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGATGGCGAGGCCTCCCAC	NA	False	NA	NA	False	TTTAAA	-32	NA	4583763	4584102	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_4583800_4584100
H1_mix_00081579	chr7	+	276	1	Intergenic	novelGene_1335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTCTACTAAAAATACAAAAA	NA	False	NA	NA	False	NA	NA	NA	5514208	5514484	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_5514200_5514500
H1_mix_00081580	chr7	+	313	1	Intergenic	novelGene_1340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTTTAAAGCATGCTGT	NA	False	NA	NA	False	TTTAAA	-38	NA	9355824	9356137	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_9355800_9356100
H1_mix_00081581	chr7	+	549	1	Intergenic	novelGene_1345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	696	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGGGTATTGATGGCC	1665	False	NA	NA	False	NA	NA	NA	22705326	22705875	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_22705300_22705900
H1_mix_00081582	chr7	+	6349	1	Intergenic	novelGene_1350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGGAATGAACCATCCTT	5675	False	NA	NA	False	AATAAA	-16	NA	24402256	24408605	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_24402300_24408600
H1_mix_00081583	chr7	+	235	1	Intergenic	novelGene_1354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACGCTGCCCGATCGCCTC	NA	False	NA	NA	False	NA	NA	NA	29787074	29787309	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_29787100_29787300
H1_mix_00081585	chr7	+	303	1	Intergenic	novelGene_1359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCTGGCCAGTTCTAAAT	8619	False	NA	NA	False	NA	NA	NA	44856684	44856987	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_44856700_44857000
H1_mix_00081586	chr7	+	301	1	Intergenic	novelGene_1360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTTTGCTATTTTTAAGA	NA	False	NA	NA	False	NA	NA	NA	46326892	46327193	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_46326900_46327200
H1_mix_00081587	chr7	+	411	1	Intergenic	novelGene_1361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACCCTTAGCGGCAAGTC	NA	False	NA	NA	False	NA	NA	NA	51870488	51870899	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_51870500_51870900
H1_mix_00081588	chr7	+	691	1	Intergenic	novelGene_1363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTGCCCAGCAATTTACT	NA	False	NA	NA	False	NA	NA	NA	51871133	51871824	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_51871100_51871800
H1_mix_00081590	chr7	+	1512	1	Intergenic	novelGene_1366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAATACTCTCACCTCAG	NA	False	NA	NA	False	NA	NA	NA	65300202	65301714	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_65300200_65301700
H1_mix_00081591	chr7	+	569	1	Intergenic	novelGene_1369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTCTACTAAAAATACAAAAT	4022	False	NA	NA	False	NA	NA	NA	69921327	69921896	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_69921300_69921900
H1_mix_00081592	chr7	+	3023	1	Intergenic	novelGene_1372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCCTTCTAGATTCCATT	2552	False	NA	NA	False	NA	NA	NA	74967536	74970559	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_74967500_74970600
H1_mix_00081593	chr7	+	1298	1	Intergenic	novelGene_1373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATAAAAGCTCCACCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	75370502	75371800	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_75370500_75371800
H1_mix_00081594	chr7	+	2904	1	Intergenic	novelGene_1379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6940	False	NA	NA	False	NA	NA	NA	92820546	92823450	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_92820500_92823400
H1_mix_00081595	chr7	+	898	1	Intergenic	novelGene_1383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGGATCACCTGAGGTAA	NA	False	NA	62	True	NA	NA	NA	100369038	100369936	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_100369000_100369900
H1_mix_00081596	chr7	+	269	1	Intergenic	novelGene_1384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTTCAGCTTTCCCTG	1489	False	NA	NA	False	NA	NA	NA	100951026	100951295	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_100951000_100951300
H1_mix_00081597	chr7	+	426	1	Intergenic	novelGene_1387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTCTCTGTTATTGAAAC	NA	False	NA	NA	False	AAAACA	-18	NA	102343380	102343806	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_102343400_102343800
H1_mix_00081598	chr7	+	359	1	Intergenic	novelGene_1388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTCCAGCCCCTGGCAA	7233	False	NA	NA	False	AAAACA	-34	NA	103359138	103359497	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_103359100_103359500
H1_mix_00081599	chr7	+	2589	1	Intergenic	novelGene_1392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTCTATTAAAAACACAAAAA	NA	False	NA	NA	False	NA	NA	NA	112228454	112231043	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_112228500_112231000
H1_mix_00081600	chr7	+	280	1	Intergenic	novelGene_1394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAGATTAATCAGACACGA	NA	False	NA	NA	False	NA	NA	NA	113235547	113235827	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_113235500_113235800
H1_mix_00081601	chr7	+	230	1	Intergenic	novelGene_1396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	218	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATCTCACCAATATGAAAT	1	False	NA	NA	False	NA	NA	NA	120009524	120009754	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_120009500_120009800
H1_mix_00081603	chr7	+	276	1	Intergenic	novelGene_1399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATGAGAGCTGTAGAGA	7950	False	NA	NA	False	AATAGA	-8	NA	121565338	121565614	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_121565300_121565600
H1_mix_00081605	chr7	+	918	1	Intergenic	novelGene_1403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTATATCCCTTACAGTC	NA	False	NA	NA	False	NA	NA	NA	125913540	125914458	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_125913500_125914500
H1_mix_00081606	chr7	+	3120	1	Intergenic	novelGene_1405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACATTGCAGTTGAAAAT	5244	False	NA	NA	False	AATAAA	-45	NA	128461189	128464309	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_128461200_128464300
H1_mix_00081607	chr7	+	3808	1	FSM	ENSG00000288884.1	ENST00000690978.1	2385	1	-1433	10	-1433	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTAAATTATCCAGTCTT	NA	False	NA	-2	True	ATTAAA	-10	NA	128659661	128663469	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_128659700_128663500
H1_mix_00081608	chr7	+	920	1	Intergenic	novelGene_1406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CACAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	130431665	130432585	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_130431700_130432600
H1_mix_00081609	chr7	+	3813	1	Intergenic	novelGene_1407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGCTGCTGCTCACTGT	NA	False	NA	NA	False	NA	NA	NA	132773229	132777042	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_132773200_132777000
H1_mix_00081610	chr7	+	966	1	Intergenic	novelGene_1408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	135482020	135482986	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_135482000_135483000
H1_mix_00081611	chr7	+	284	1	Intergenic	novelGene_1411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTTTTTTAAATGATGAAA	NA	False	NA	NA	False	NA	NA	NA	143344766	143345050	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_143344800_143345000
H1_mix_00081613	chr7	+	252	1	Intergenic	novelGene_1413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	182	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGCCTTCATGTCTGCGT	NA	False	NA	NA	False	NA	NA	NA	143789883	143790135	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_143789900_143790100
H1_mix_00081615	chr7	+	4104	21	NIC	ENSG00000164828.18	novel	4488	21	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_6	129.291637393917	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGGGATATAAACAGTCTA	-4	True	NA	12	True	AATAAA	-22	NA	816626	874902	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_816674_832504_832602_838797_838987_841945_842131_843205_843233_843340_843521_849922_850034_851383_851483_851949_852044_852608_852668_852812_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
H1_mix_00081616	chr7	+	4270	22	NIC	ENSG00000164828.18	novel	3812	18	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	101	junction_7	135.884721717976	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGGGATATAAACAGTCTA	15	True	NA	12	True	AATAAA	-22	NA	816645	874902	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_816674_838797_838987_841945_842131_843205_843233_843340_843521_848417_848616_849519_849604_849922_850034_851383_851483_851949_852044_852608_852668_852812_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
H1_mix_00081617	chr7	+	3965	20	NIC	ENSG00000164828.18	novel	4062	20	NA	NA	11	-1	combination_of_known_junctions	FALSE	canonical	3	60	junction_6	109.281993103258	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGCATGGGATATAAACAG	23	False	NA	8	True	AATAAA	-18	NA	816653	874898	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_816674_832504_832602_838797_838987_841945_842131_843205_843233_843340_843521_851383_851483_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
H1_mix_00081618	chr7	+	4359	23	NIC	ENSG00000164828.18	novel	4488	21	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	101	junction_8	127.030752117238	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGGGATATAAACAGTCTA	23	False	NA	12	True	AATAAA	-22	NA	816653	874902	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_816674_832504_832602_838797_838987_841945_842131_843205_843233_843340_843521_848417_848616_849519_849604_849922_850034_851383_851483_851949_852044_852608_852668_852812_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
H1_mix_00081619	chr7	+	3862	19	NIC	ENSG00000164828.18	novel	3868	18	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	123	junction_8	106.193743276669	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATGGGATATAAACAGT	25	False	NA	9	True	AATAAA	-19	NA	816655	874899	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_816674_832504_832602_838797_838987_841945_842131_843205_843233_843340_843521_851949_852044_852608_852668_852812_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
H1_mix_00081620	chr7	+	4326	23	NNC	ENSG00000164828.18	novel	4488	21	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_14	138.153533289347	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGGGATATAAACAGTCTA	26	False	NA	12	True	AATAAA	-22	NA	816656	874902	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_816674_832504_832602_838797_838987_841945_842131_843205_843233_843340_843521_848417_848616_849519_849604_849922_850034_851383_851483_851949_852044_852608_852668_852809_852953_853408_853586_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
H1_mix_00081622	chr7	+	4430	10	NIC	ENSG00000164828.18	novel	3701	17	NA	NA	112	-1	intron_retention	FALSE	canonical	1	5	junction_7	143.166397188553	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGCATGGGATATAAACAG	1821	False	NA	8	True	AATAAA	-18	NA	851278	874898	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_869348_869517_872469_872563_873214
H1_mix_00081625	chr7	+	2062	3	FSM	ENSG00000164853.9	ENST00000316333.9	2091	3	29	0	29	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCAGGTCCATCTTTTT	7	True	NA	16	True	AATAAA	-16	NA	1232900	1237326	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_1233292_1233519_1233696_1235831
H1_mix_00081628	chr7	+	4799	14	NNC	ENSG00000136295.15	novel	4805	14	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	420.315660471829	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTTCCTGAGCTGCT	-12	True	NA	25	True	AATAAA	-14	NA	2631988	2664802	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_2632279_2646852_2647023_2647141_2647254_2647417_2647639_2647958_2648055_2649566_2649637_2649912_2649989_2652186_2652243_2652917_2653011_2656091_2656185_2656397_2656535_2658285_2658460_2658939_2659016_2661667
H1_mix_00081629	chr7	+	412	1	FSM	ENSG00000231357.1	ENST00000438379.1	402	1	-10	0	-10	0	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACATTTTATAATACTTA	-11	True	NA	NA	False	CATAAA	-20	NA	2835610	2836022	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_2835600_2836000
H1_mix_00081630	chr7	+	740	1	FSM	ENSG00000224593.1	ENST00000439177.1	601	1	54	-193	54	81	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGTGGGGAGAGTAAAG	NA	False	NA	NA	False	AAGAAA	-28	NA	3337942	3338682	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_3337900_3338700
H1_mix_00081631	chr7	+	1335	3	ISM	ENSG00000164916.11	ENST00000328914.5	11194	9	12	16397	12	-6	5prime_fragment	FALSE	canonical	2	15	junction_1	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAGGCAAAAATGGTTGT	22	True	NA	NA	False	AATAAA	-18	NA	4682306	4755045	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_4682869_4740837_4741024_4754458
H1_mix_00081632	chr7	+	2659	16	FSM	ENSG00000242802.9	ENST00000647984.1	2667	16	8	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	37.1606721623218	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCAAGAAGAGCTGCAGTA	-29	True	NA	-23	True	NA	NA	NA	4775622	4791714	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_4775757_4781174_4781313_4783315_4783461_4783688_4783799_4784202_4784372_4784907_4785049_4785414_4785453_4785521_4785685_4786249_4786429_4787633_4787777_4788153_4788295_4788839_4788952_4789831_4789930_4790458_4790592_4790672_4790888_4791114
H1_mix_00081633	chr7	+	2133	6	NIC	ENSG00000196204.12	novel	2201	6	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	103.464003402149	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAACCTAGTCTGTGTCATC	-5	True	NA	16	True	ATTAAA	-16	NA	4974052	4998165	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_4974162_4976300_4976437_4983670_4983774_4984961_4985076_4989062_4989178_4996609
H1_mix_00081637	chr7	+	590	4	FSM	ENSG00000235944.9	ENST00000430530.5	566	4	-24	0	4	0	multi-exon	FALSE	canonical	0	0	junction_3	7.93025150224688	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTTCGTGATTCTACTC	9	True	NA	NA	False	NA	NA	NA	5823164	5839152	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_5823527_5831180_5831284_5833526_5833569_5839069
H1_mix_00081638	chr7	+	1499	8	FSM	ENSG00000136247.15	ENST00000396709.5	1485	8	-14	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	135.010506015991	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGCCTTTGAGCTGTAGT	1	True	NA	7	True	AAGAAA	-19	NA	6577453	6588919	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_6577721_6578565_6578747_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
H1_mix_00081639	chr7	+	792	5	FSM	ENSG00000187953.10	ENST00000431453.1	792	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	41.3037528561268	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCGATGAACTGATCTTCA	7862	False	NA	NA	False	AGTAAA	-24	NA	6737634	6747105	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_6737937_6740173_6740325_6741684_6741853_6746087_6746189_6747035
H1_mix_00081641	chr7	+	2881	11	NIC	ENSG00000164654.16	novel	4877	13	NA	NA	124	0	combination_of_known_splicesites	FALSE	canonical	3	53	junction_1	83.6382687530056	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCAGTTTTGATGTTTGA	24	False	NA	9	True	AATAAA	-14	NA	7567606	7607223	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_7567689_7572435_7573770_7574097_7574197_7583117_7583373_7585635_7585806_7588497_7588564_7589404_7589564_7594979_7595133_7596256_7596462_7605941_7606072_7606995
H1_mix_00081642	chr7	+	271	2	Intergenic	novelGene_1341	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGAAGGAGTCAGTCAGA	NA	False	NA	NA	False	NA	NA	NA	9356429	9461842	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_9356553_9461694
H1_mix_00081644	chr7	+	471	3	FSM	ENSG00000106443.17	ENST00000489305.1	471	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	97.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAAATATATTAGTGTT	NA	False	NA	NA	False	AATAAA	-10	NA	11061815	11062993	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_11061842_11061963_11062086_11062670
H1_mix_00081646	chr7	+	12541	9	FSM	ENSG00000106460.19	ENST00000396667.7	12539	9	-6	4	0	-4	multi-exon	FALSE	canonical	0	0	junction_2	94.730868780984	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATGTTGTGCTATTTATA	10	True	NA	NA	False	AATAAA	-14	NA	12211293	12243363	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_12211426_12214200_12214395_12214808_12215028_12218457_12218522_12224225_12224386_12229678_12229820_12230388_12230439_12231061_12231116_12231836
H1_mix_00081647	chr7	+	391	1	FSM	ENSG00000236048.2	ENST00000420252.1	1194	1	85	718	85	-718	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGAATCTGCTAAGAAGT	207	False	NA	NA	False	CATAAA	-36	NA	12471436	12471827	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_12471400_12471800
H1_mix_00081648	chr7	+	247	1	FSM	ENSG00000203523.3	ENST00000421146.1	910	1	-122	785	-122	-785	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCCAATTCAAATCCTCT	NA	False	NA	NA	False	AATGAA	-21	NA	12490972	12491219	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_12491000_12491200
H1_mix_00081649	chr7	+	587	3	ISM	ENSG00000006747.15	ENST00000341757.9	2569	15	101	71921	-41	78	5prime_fragment	FALSE	canonical	3	14	junction_1	3.5	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACAAGGGTGACTGCTTC	6	False	NA	NA	False	NA	NA	NA	12570677	12581183	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_12570986_12578063_12578219_12581059
H1_mix_00081650	chr7	+	2432	13	ISM	ENSG00000006747.15	ENST00000519209.5	2660	14	15173	-5	-6425	5	3prime_fragment	FALSE	canonical	3	10	junction_11	2.7938424357067	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCATGACAAAATGAATTG	9039	False	NA	20	True	ATTAAA	-21	NA	12604605	12653607	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_12604664_12622800_12622894_12625009_12625143_12625761_12625851_12626583_12626800_12629100_12629223_12636044_12636136_12640346_12640518_12644137_12644316_12644583_12644706_12649466_12649545_12651840_12651902_12652587
H1_mix_00081651	chr7	+	659	2	FSM	ENSG00000229108.3	ENST00000442176.1	697	2	38	0	1	0	multi-exon	FALSE	canonical	1	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTACAACAGGTCTTGACA	-1	True	NA	NA	False	AGTAAA	-7	NA	15688415	15695491	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_15688453_15694869
H1_mix_00081652	chr7	+	4269	11	NIC	ENSG00000048052.24	novel	4239	12	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	21.9547261426783	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCTTTCATACACTTGGC	3	True	NA	16	True	AATAAA	-16	NA	18495752	18668843	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_18496024_18496261_18496325_18585280_18585523_18590344_18590487_18591515_18591643_18593907_18594030_18634626_18634743_18644670_18644794_18647784_18647999_18648465_18648684_18666212
H1_mix_00081654	chr7	+	836	5	Fusion	ENSG00000267055.1_ENSG00000228598.1	novel	639	4	NA	NA	-20853	10	multi-exon	FALSE	canonical	2	10	junction_2	7.98044484975618	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTGGAGAAAAATATGTGT	NA	False	NA	15	True	AATAAA	-26	NA	20121062	20153541	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_+_20121314_20128961_20129003_20147426_20147538_20150434_20150590_20153263
H1_mix_00081655	chr7	+	1988	9	FSM	ENSG00000105855.10	ENST00000478974.1	2054	9	0	66	0	-66	multi-exon	FALSE	canonical	0	0	junction_7	3.99217985566783	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGGTGTGCATTTTTCC	25	False	NA	NA	False	NA	NA	NA	20331101	20398996	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_20331934_20363636_20363723_20367011_20367187_20379050_20379298_20380665_20380832_20381726_20381886_20391402_20391499_20394895_20394986_20398859
H1_mix_00081656	chr7	+	749	5	FSM	ENSG00000228649.10	ENST00000663057.1	747	5	-2	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	7.66077672302228	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATGCGTATTATATTTC	-5	True	NA	NA	False	AATATA	-33	NA	22854253	22861436	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_22854281_22856521_22856557_22856972_22857017_22860546_22860639_22860885
H1_mix_00081657	chr7	+	3587	4	NIC	ENSG00000228649.10	novel	1251	5	NA	NA	67	0	intron_retention	FALSE	canonical	2	3	junction_1	7.78888096369861	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTACAGATAAGCAGCTATT	207	False	NA	NA	False	AATAAA	-24	NA	22854465	22861579	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_22854965_22856521_22856557_22856972_22857017_22858570
H1_mix_00081658	chr7	+	4664	3	FSM	ENSG00000228649.10	ENST00000671680.1	619	3	0	-4045	0	0	multi-exon	FALSE	canonical	3	3	junction_1	8.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATTGAGTTAAATGAAA	504	False	NA	NA	False	ATTAAA	-12	NA	22854762	22861399	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_22854965_22856521_22856557_22856972
H1_mix_00081659	chr7	+	2430	1	Intergenic	novelGene_1348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGGGTTGTTTCCTTTTT	3439	False	NA	NA	False	AATAAA	-25	NA	23471450	23473880	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_23471400_23473900
H1_mix_00081660	chr7	+	856	1	FSM	ENSG00000236654.2	ENST00000428259.1	207	1	-539	-110	-539	110	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTCTGAGCCTTGCTTTA	5402	False	NA	NA	False	NA	NA	NA	23480213	23481069	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_23480200_23481100
H1_mix_00081661	chr7	+	892	1	FSM	ENSG00000232818.2	ENST00000439199.1	892	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTTTTATGCAAGAAAAAT	9827	False	NA	NA	False	NA	NA	NA	23490472	23491364	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_23490500_23491400
H1_mix_00081662	chr7	+	6081	12	NIC	ENSG00000105926.16	novel	1191	8	NA	NA	-264	2000	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	86.3197974859564	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTACTCCCATTTCTTT	266	False	NA	NA	False	NA	NA	NA	24573748	24691540	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_24574279_24623665_24623785_24641715_24641869_24649611_24649765_24650484_24650713_24663589_24663722_24665587_24665688_24666020_24666090_24668498_24668661_24679130_24679334_24680391_24680521_24687437
H1_mix_00081663	chr7	+	929	8	NIC	ENSG00000086300.16	novel	823	7	NA	NA	3	-79	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	59.4038410082262	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCACATGGATGTAAAGTAA	-9	True	NA	NA	False	NA	NA	NA	26291864	26372529	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_26292087_26346419_26346467_26357006_26357128_26360974_26361062_26364534_26364636_26365046_26365146_26371820_26372034_26372490
H1_mix_00081664	chr7	+	4615	2	Antisense	novelGene_ENSG00000288973.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGTGG	NA	False	NA	NA	False	NA	NA	NA	29644307	29648952	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr7_+_29645209_29645238
H1_mix_00081666	chr7	+	2295	13	FSM	ENSG00000106086.20	ENST00000258679.11	2293	13	-4	2	-3	-2	multi-exon	FALSE	canonical	1	1	junction_12	63.931115272612	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACGTATTGTTTCAGTTC	-45	True	NA	NA	False	AATAAA	-17	NA	30028357	30090742	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_30028803_30045084_30045202_30046209_30046366_30047831_30047957_30049223_30049383_30050433_30050475_30052708_30052867_30054708_30054866_30055256_30055343_30060883_30060943_30061896_30062028_30062671_30062743_30090152
H1_mix_00081667	chr7	+	2064	13	NIC	ENSG00000106086.20	novel	2140	14	NA	NA	-15	2	combination_of_known_splicesites	FALSE	canonical	3	20	junction_12	58.8894916111714	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGTTTGTGGCCTGTGA	-26	True	NA	21	True	AATAAA	-18	NA	30028376	30118347	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_30028803_30045084_30045202_30046209_30046366_30047831_30047957_30049223_30049383_30050433_30050475_30052708_30052867_30054708_30054866_30055256_30055343_30060883_30060943_30061896_30062028_30062671_30062743_30117969
H1_mix_00081668	chr7	+	760	4	NIC	ENSG00000180354.16	novel	5761	3	NA	NA	41	1225	combination_of_known_splicesites	FALSE	canonical	3	17	junction_3	12.2565175405668	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTTCCAAGTAGCCTAT	30	True	NA	11	True	AGTAAA	-6	NA	30135028	30159194	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_30135299_30146176_30146300_30157437_30157596_30158985
H1_mix_00081669	chr7	+	4049	3	NNC	ENSG00000106128.19	novel	361	2	NA	NA	-235	4145	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	8	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCCTGAAGTTTCCGTAT	1	True	NA	NA	False	ATTAAA	-41	NA	30983845	30997399	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_30984360_30993172_30993353_30994044
H1_mix_00081672	chr7	+	659	3	Fusion	ENSG00000237004.4_ENSG00000231952.3	novel	711	2	NA	NA	1	174	multi-exon	FALSE	canonical	2	3	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCGCGTCCGTGTGAAGA	-5	True	NA	NA	False	TATAAA	-17	NA	32728838	32838744	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_+_32729010_32833007_32833165_32838413
H1_mix_00081673	chr7	+	472	1	FSM	ENSG00000273014.1	ENST00000609151.1	472	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTATTTCAAATGTATTA	NA	False	NA	18	True	ATTAAA	-30	NA	32758881	32759353	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_32758900_32759400
H1_mix_00081674	chr7	+	1760	7	NIC	ENSG00000122642.11	novel	3424	10	NA	NA	5	224	combination_of_known_junctions	FALSE	canonical	3	3	junction_6	69.5533368478225	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTATCATCTACACTCAGA	-4	True	NA	NA	False	AATATA	-22	NA	32957429	32993298	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_32957795_32974616_32974763_32975181_32975372_32976353_32976500_32980363_32980554_32988506_32988653_32992721
H1_mix_00081675	chr7	+	2635	21	NIC	ENSG00000122507.21	novel	3482	23	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	31.5341085176036	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAGCTCTGTCCATGCT	122	False	NA	NA	False	NA	NA	NA	33129449	33534176	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_33129553_33146241_33146365_33152700_33152852_33155637_33155703_33177477_33177592_33257235_33257411_33264289_33264375_33273011_33273196_33273826_33273957_33336440_33336623_33340896_33340974_33344580_33344635_33349067_33349171_33351218_33351324_33352858_33352874_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33505462_33505646_33533953
H1_mix_00081676	chr7	+	2777	12	ISM	ENSG00000164619.10	ENST00000649409.2	5287	15	14	75933	-5	25285	5prime_fragment	TRUE	canonical	3	54	junction_11	8.30612638581849	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTGTGAGAGATCTACTC	18	False	NA	NA	False	AATATA	-45	NA	33905552	34080494	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_33905747_33906817_33906904_33937288_33937389_33966478_33966562_33970328_33970420_33974701_33974785_34046305_34046406_34051860_34051971_34055162_34055304_34058058_34058164_34062001_34062048_34078856
H1_mix_00081677	chr7	+	2123	7	ISM	ENSG00000122547.11	ENST00000242108.9	4655	8	0	4351	0	0	5prime_fragment	FALSE	canonical	3	35	junction_1	4.83045891539648	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGCAGAACTCACTTGT	-7	True	NA	NA	False	AGTAAA	-23	NA	36153253	36297187	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_36153675_36154132_36155203_36238984_36239037_36281114_36281226_36284685_36284821_36287638_36287778_36296992
H1_mix_00081678	chr7	+	821	1	FSM	ENSG00000225739.1	ENST00000434232.1	732	1	-96	7	-96	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCATATTGAACAGTCCAGG	1	False	NA	NA	False	ATTAAA	-27	NA	36818862	36819683	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_36818900_36819700
H1_mix_00081679	chr7	+	449	4	NIC	ENSG00000281103.3	novel	790	5	NA	NA	123	-106	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	9.93310961716756	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAATATGTGTGTGTGTGT	46	False	NA	NA	False	NA	NA	NA	38331269	38350450	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_38331397_38336716_38336827_38346020_38346128_38350345
H1_mix_00081682	chr7	+	2922	6	NNC	ENSG00000006451.8	novel	2787	5	NA	NA	-96	57513	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	400.285098398629	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCAGCAGGGCCCATTT	1	True	NA	NA	False	AAAAAG	-2	NA	39623468	39765633	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_39623826_39686630_39686782_39690381_39690591_39696684_39696860_39706122_39708117_39765597
H1_mix_00081683	chr7	+	4725	12	NNC	ENSG00000188185.13	novel	3049	12	NA	NA	5	1532	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_6	8.86631661108117	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGTGAGTTTCTGCACC	24	True	NA	36	True	TATAAA	-21	NA	39733461	39794624	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_39734045_39767403_39767671_39771004_39771092_39779270_39779386_39780502_39780625_39781234_39781352_39781769_39781886_39782734_39782800_39788481_39788605_39789353_39789545_39791593_39791652_39791743
H1_mix_00081684	chr7	+	3123	1	FSM	ENSG00000065883.17	ENST00000643868.1	1901	1	1723	-2945	990	2945	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTATGTGTGTTTTGTTC	1485	False	NA	NA	False	ATTAAA	-15	NA	39952740	39955863	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_39952700_39955900
H1_mix_00081685	chr7	+	2267	2	FSM	ENSG00000164543.7	ENST00000474211.1	2267	2	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTGTAAATCTCTTGCA	4626	False	NA	9	True	AGTAAA	-15	NA	43622288	43625184	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_43623889_43624517
H1_mix_00081686	chr7	+	1398	1	FSM	ENSG00000237972.1	ENST00000418303.1	1358	1	161	-201	161	201	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTAAAAAGTGGATA	204	False	NA	NA	False	AATAAA	-19	NA	43918857	43920255	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_43918900_43920300
H1_mix_00081687	chr7	+	1015	8	NNC	ENSG00000078967.13	novel	849	8	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	23.3080523880149	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAATTGACATTTCAGCC	-29	True	NA	12	True	AATAAA	-26	NA	43926420	43953567	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_43926557_43938430_43938495_43942825_43942858_43942953_43943032_43948631_43948738_43950598_43950693_43952649_43952692_43953104
H1_mix_00081688	chr7	+	2077	13	FSM	ENSG00000136279.21	ENST00000468694.5	2068	13	-9	0	0	0	multi-exon	FALSE	canonical	1	20	junction_8	125.076310040444	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCTGTTGTCTTCCCC	3	True	NA	24	True	NA	NA	NA	44044701	44061637	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44044821_44050224_44050281_44051829_44051943_44052866_44052942_44056756_44056904_44057781_44057860_44058128_44058281_44058428_44058481_44058877_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
H1_mix_00081691	chr7	+	2754	7	FSM	ENSG00000106636.9	ENST00000677436.1	2737	7	-17	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	171.775693533424	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGTCTTGAAATTTCACA	-22	True	NA	10	True	NA	NA	NA	44200965	44214276	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44201240_44204574_44204651_44206384_44206486_44207387_44207493_44208132_44208199_44211022_44211125_44212246
H1_mix_00081692	chr7	+	4047	19	NNC	ENSG00000122515.16	novel	5228	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_15	37.7959515109394	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGCCTGGCCGAGTCCCT	-5	True	NA	18	True	ATTAAA	-14	NA	44748846	44768688	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_44748992_44756187_44756300_44756424_44756540_44756946_44757150_44757377_44757562_44757847_44758109_44759280_44759461_44760424_44760594_44761448_44761594_44761694_44761906_44762880_44762987_44763255_44763414_44764418_44764487_44764940_44765010_44765334_44765580_44765966_44766057_44766163_44766334_44766420_44766664_44767515
H1_mix_00081694	chr7	+	865	6	FSM	ENSG00000196262.15	ENST00000415933.5	863	6	-2	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	8547.84226340192	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTGTCCTCGTTTGAGT	-1	True	NA	-1	True	AATAAA	-10	NA	44796679	44801624	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44796794_44799246_44799278_44799391_44799481_44799701_44799875_44800423_44800544_44801286
H1_mix_00081695	chr7	+	2338	6	FSM	ENSG00000196262.15	ENST00000677107.1	2337	6	-1	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	8155.89619845667	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCCTAGTATTTCTTATT	-1	True	NA	34	True	AATAAA	-19	NA	44796679	44803115	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44796794_44797519_44797622_44799246_44799278_44799391_44799481_44799701_44799875_44801286
H1_mix_00081696	chr7	+	2147	4	FSM	ENSG00000196262.15	ENST00000676977.1	2146	4	-1	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8295.88397272339	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCCTAGTATTTCTTATT	-1	True	NA	34	True	AATAAA	-19	NA	44796679	44803115	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44796794_44799246_44799278_44799701_44799875_44801286
H1_mix_00081697	chr7	+	744	5	NNC	ENSG00000196262.15	novel	907	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_4	7542.28370588113	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTCGTTTGAGTTAAGAG	12	False	NA	5	True	AATAAA	-16	NA	44796692	44801630	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_44796794_44799246_44799278_44799391_44799481_44799701_44799881_44801286
H1_mix_00081698	chr7	+	735	5	NNC	ENSG00000196262.15	novel	907	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	110	junction_4	7523.7550589782	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTCGTTTGAGTTAAGAG	12	False	NA	5	True	AATAAA	-16	NA	44796692	44801630	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_44796794_44799246_44799278_44799391_44799481_44799701_44799872_44801286
H1_mix_00081699	chr7	+	2782	5	FSM	ENSG00000196262.15	ENST00000678789.1	2782	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	7209.68103923468	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTTCATTATCCCTAGT	271	False	NA	24	True	AATAAA	-9	NA	44796951	44803105	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44797622_44799246_44799278_44799391_44799481_44799701_44799875_44801286
H1_mix_00081700	chr7	+	2765	6	FSM	ENSG00000196262.15	ENST00000677022.1	2765	6	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	8121.93903941663	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCCTAGTATTTCTTATT	12	False	NA	34	True	AATAAA	-19	NA	44797135	44803115	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44797622_44798747_44798905_44799246_44799278_44799391_44799481_44799701_44799875_44801286
H1_mix_00081701	chr7	+	2149	3	FSM	ENSG00000196262.15	ENST00000494484.1	2149	3	0	0	0	0	multi-exon	FALSE	canonical	3	16368	junction_2	188	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTTGATGTAGGCTTTA	849	False	NA	22	True	AATAAA	-33	NA	44797972	44801647	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44799278_44799391_44799875_44801286
H1_mix_00081702	chr7	+	908	6	FSM	ENSG00000196262.15	ENST00000480603.1	842	6	-66	0	-66	0	multi-exon	FALSE	canonical	0	0	junction_5	8203.86663957917	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTGTCCTCGTTTGAGT	1624	False	NA	-1	True	AATAAA	-10	NA	44798747	44801624	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_44798905_44799246_44799278_44799391_44799481_44799701_44799875_44800423_44800544_44801286
H1_mix_00081703	chr7	+	5304	3	FSM	ENSG00000136280.17	ENST00000481194.1	5304	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	208.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGTTGCCAAGCATGT	NA	False	NA	39	True	AAAAAG	-28	NA	45064602	45076453	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_45064647_45069825_45074409_45075776
H1_mix_00081705	chr7	+	2748	8	NNC	ENSG00000272556.3	novel	10247	17	NA	NA	9146	-6244	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	9.98366011980351	174	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTGCCTCACAACAACCT	NA	False	NA	NA	False	NA	NA	NA	45782740	45809019	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_45783147_45788718_45788955_45791787_45791853_45797477_45797675_45798538_45798604_45805098_45805290_45807339_45807398_45807489
H1_mix_00081706	chr7	+	2319	1	Genic_Genomic	ENSG00000228204.2	novel	NA	NA	NA	NA	3506	297	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAGAGCCTTAAGTAATT	NA	False	NA	NA	False	AATAAA	-16	NA	51020968	51023287	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr7_+_51021000_51023300
H1_mix_00081707	chr7	+	509	1	Genic_Genomic	ENSG00000226278.1	novel	NA	NA	NA	NA	8382	399	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGAATTTGCAGTTCT	NA	False	NA	24	True	AATAAA	-25	NA	55773178	55773687	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr7_+_55773200_55773700
H1_mix_00081708	chr7	+	1428	11	ISM	ENSG00000146731.11	ENST00000275603.9	2584	14	1	3051	1	-2	5prime_fragment	FALSE	canonical	3	2378	junction_7	194.50668368979	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGTGCATGCTTTTAACA	-12	True	NA	NA	False	NA	NA	NA	56051765	56060938	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_56051986_56052421_56052486_56054368_56054504_56055623_56055798_56056310_56056415_56057992_56058104_56058361_56058522_56058619_56058703_56059543_56059641_56060268_56060417_56060806
H1_mix_00081709	chr7	+	268	1	FSM	ENSG00000206603.1	ENST00000383876.1	138	1	-133	3	-133	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATTACCTCGTGTTCAA	3411	False	NA	NA	False	TTTAAA	-22	NA	56055231	56055499	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_56055200_56055500
H1_mix_00081712	chr7	+	499	1	FSM	ENSG00000223974.1	ENST00000454982.1	569	1	150	-80	150	80	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTAAAGCAATTCTCCTG	NA	False	NA	NA	False	NA	NA	NA	64551647	64552146	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_64551600_64552100
H1_mix_00081713	chr7	+	582	4	NNC	ENSG00000286456.2	novel	524	3	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	104.894656150296	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGGGCCCAGCACCTAG	10	False	NA	7	True	AATAAA	-16	NA	64574707	64604053	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_64574849_64599658_64599783_64603558_64603630_64603807
H1_mix_00081714	chr7	+	667	1	FSM	ENSG00000224669.1	ENST00000414815.1	475	1	-169	-23	-169	23	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAGTGTGAAATAACCCAG	7839	False	NA	NA	False	NA	NA	NA	64582563	64583230	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_64582600_64583200
H1_mix_00081716	chr7	+	5394	6	NIC	ENSG00000196247.13	novel	5142	7	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	55.6330836822839	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGATTATGCGTGAAC	0	True	NA	7	True	AATAAA	-19	NA	64666119	64711026	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_64666286_64669036_64669179_64679176_64679337_64691247_64691375_64691864_64691961_64706323
H1_mix_00081717	chr7	+	453	2	NNC	ENSG00000197008.10	novel	2308	2	NA	NA	-1	-32305	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAATATATTTGTGTCATA	1	True	NA	-2	True	CATAAA	-7	NA	64794426	64799498	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_64794572_64799190
H1_mix_00081719	chr7	+	2119	1	FSM	ENSG00000223476.1	ENST00000424651.1	344	1	-222	-1553	-222	1553	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGTCTTAGGCTTTTCT	NA	False	NA	18	True	AATAAA	-19	NA	64933050	64935169	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_64933000_64935200
H1_mix_00081720	chr7	+	1605	2	ISM	ENSG00000234585.6	ENST00000452026.1	1383	12	7847	-865	7847	0	3prime_fragment	FALSE	canonical	3	25	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGGTCTTGCAATGGT	NA	False	NA	NA	False	AATAAA	-18	NA	65072845	65074713	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_65073515_65073777
H1_mix_00081721	chr7	+	3225	4	NNC	ENSG00000146757.14	novel	2957	3	NA	NA	-649	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.38232646698	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGATTGTGTGTGAACTT	NA	False	NA	28	True	AATAAA	-19	NA	65373149	65401081	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_65373275_65373737_65374001_65388805_65388902_65398340
H1_mix_00081722	chr7	+	3124	3	FSM	ENSG00000146757.14	ENST00000357512.3	3124	3	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	45	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTAGTGTATTCGATGAA	NA	False	NA	3	True	ATTAAA	-20	NA	65373798	65401135	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_65374001_65387901_65388029_65398340
H1_mix_00081724	chr7	+	1294	2	ISM	ENSG00000273024.6	ENST00000614726.2	2019	15	66733	384	66692	-384	internal_fragment	FALSE	canonical	3	25	junction_1	0	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCACTTCCAGAGCAGGT	NA	False	NA	NA	False	NA	NA	NA	65714555	65718304	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_65715708_65718162
H1_mix_00081725	chr7	+	348	1	FSM	ENSG00000206785.1	ENST00000384058.1	135	1	24	-237	24	237	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGGTTCCGGTGCTG	8954	False	NA	NA	False	NA	NA	NA	65760075	65760423	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_65760100_65760400
H1_mix_00081726	chr7	+	1007	8	FSM	ENSG00000126522.17	ENST00000487982.5	1007	8	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	35.625031328307	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGGAGACTGGGCCAGG	6	True	NA	NA	False	NA	NA	NA	66075833	66087160	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_66075857_66076038_66076094_66081802_66081998_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66086743
H1_mix_00081727	chr7	+	1410	5	FSM	ENSG00000241258.7	ENST00000338592.5	1393	5	-17	0	7	0	multi-exon	FALSE	canonical	1	4	junction_2	27.5816968296006	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACCAGGGGTGATGGCAC	-7	True	NA	NA	False	AATACA	-4	NA	66114832	66153289	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_66114971_66127703_66127741_66134279_66134375_66145442_66145501_66152207
H1_mix_00081728	chr7	+	906	2	FSM	ENSG00000237310.3	ENST00000654121.1	926	2	16	4	16	0	multi-exon	FALSE	canonical	3	6	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACTCTTCTGGTTTTTGG	NA	False	NA	20	True	ATTAAA	-21	NA	66493674	66495470	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_66494365_66495254
H1_mix_00081730	chr7	+	906	2	FSM	ENSG00000226824.8	ENST00000693151.1	447	2	12	-471	4	471	multi-exon	FALSE	canonical	2	7	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTACTCGGGAGTCTGA	NA	False	NA	NA	False	AATACA	-39	NA	66654524	66686163	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_66654627_66685359
H1_mix_00081732	chr7	+	2796	16	Fusion	ENSG00000230295.1_ENSG00000232546.1	novel	298	4	NA	NA	8112	18950	multi-exon	FALSE	canonical	1	1	junction_1	7.01870516706766	26	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTCCCCTCACAGCGGC	4775	False	NA	NA	False	NA	NA	NA	66856607	66901931	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_+_66856798_66856957_66857073_66858076_66858136_66863605_66863694_66880708_66880893_66882892_66882968_66884252_66884402_66885058_66885247_66886351_66886456_66890250_66890412_66893386_66893452_66893916_66894019_66896554_66896650_66898178_66898295_66899079_66899204_66900950
H1_mix_00081733	chr7	+	290	2	NNC	ENSG00000106610.16	novel	663	3	NA	NA	-11	-5688	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	0	65	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGCTCACTGCAACCTCTG	3	True	NA	NA	False	NA	NA	NA	67302641	67304027	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_67302886_67303981
H1_mix_00081734	chr7	+	7370	19	FSM	ENSG00000158321.18	ENST00000342771.10	7469	19	0	99	0	-99	multi-exon	FALSE	canonical	1	7	junction_4	139.990663268909	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCAGTTTGCAGTCTCCC	-1	True	NA	NA	False	NA	NA	NA	69598474	70793407	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_69599963_69899285_69899499_70118131_70118234_70134535_70134572_70435751_70435782_70698568_70698621_70762869_70763342_70764751_70765006_70766113_70766335_70768023_70768069_70771548_70771645_70774027_70774100_70775356_70775387_70777102_70777175_70781614_70781757_70784941_70785020_70785954_70786039_70787208_70787432_70789747
H1_mix_00081737	chr7	+	3162	11	FSM	ENSG00000185274.12	ENST00000498380.6	3653	11	491	0	491	0	multi-exon	TRUE	canonical	0	0	junction_1	86.5831392362278	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGCCTCCTTTGTGTCTT	NA	False	NA	21	True	AATAAA	-21	NA	71284486	71713600	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_71284636_71335549_71335734_71388234_71388402_71415888_71416064_71420907_71421106_71571284_71571403_71665410_71665597_71669971_71670110_71677210_71677307_71710760_71710929_71712017
H1_mix_00081738	chr7	+	4054	16	NIC	ENSG00000196313.13	novel	7011	16	NA	NA	-48	-2071	combination_of_known_junctions	FALSE	canonical	3	11	junction_4	82.5192233496064	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTAGCCTTTGTCCCCTGT	NA	False	NA	NA	False	GGGGCT	-40	NA	72879300	72946228	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_72879886_72890626_72890754_72890932_72891111_72913764_72913829_72926261_72926478_72926801_72926964_72928384_72928466_72929939_72930112_72938589_72938682_72939335_72939410_72939846_72939969_72940413_72940517_72940816_72940994_72941836_72943523_72945585_72945709_72946136
H1_mix_00081739	chr7	+	4025	16	NNC	ENSG00000196313.13	novel	6013	15	NA	NA	4	-2071	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	73.2825278554779	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTAGCCTTTGTCCCCTGT	0	True	NA	NA	False	GGGGCT	-40	NA	72879368	72946228	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_72879886_72881449_72881553_72890626_72890754_72890932_72891111_72926261_72926478_72926801_72926964_72928384_72928466_72929939_72930112_72938589_72938682_72939335_72939410_72939846_72939969_72940413_72940517_72940816_72940994_72941836_72943523_72945585_72945709_72946136
H1_mix_00081740	chr7	+	712	6	NNC	ENSG00000273897.1	novel	715	6	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	12.6491106406735	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCACAAATGGTTCCTCT	NA	False	NA	NA	False	NA	NA	NA	73037383	73049246	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_73037526_73039415_73039503_73039668_73039782_73041237_73041422_73044471_73044561_73049149
H1_mix_00081741	chr7	+	597	5	NIC	ENSG00000174384.9	novel	710	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	15.9275704361965	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCACAAATGGTTCCTCT	NA	False	NA	NA	False	NA	NA	NA	73093656	73105389	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_73093797_73095681_73095769_73097383_73097568_73100617_73100707_73105292
H1_mix_00081742	chr7	+	3606	24	NNC	ENSG00000233369.7	novel	3609	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_14	704.934747412582	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCACACACTAAGTCATTG	-2	True	NA	NA	False	AATAAA	-14	NA	73154937	73207283	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_73155344_73175414_73175526_73176856_73176923_73179086_73179271_73180538_73180598_73182076_73182149_73183114_73183299_73184660_73184720_73190065_73190138_73191370_73191555_73192496_73192556_73192950_73193026_73194625_73194728_73195635_73195699_73195878_73196063_73197963_73198020_73198692_73198774_73199695_73199780_73200448_73200633_73202111_73202141_73203422_73203465_73204562_73204605_73205382_73205459_73206151
H1_mix_00081743	chr7	+	501	3	ISM	ENSG00000182487.12	ENST00000423083.1	1516	8	14002	0	13995	0	3prime_fragment	FALSE	canonical	3	12	junction_1	3	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGAGGCTCTGCAGGAATGC	NA	False	NA	NA	False	AATAAA	-17	NA	73234640	73235945	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_73234719_73235188_73235335_73235668
H1_mix_00081744	chr7	+	2120	4	ISM	ENSG00000205578.6	ENST00000380760.4	2475	8	1798	522	1798	-522	internal_fragment	FALSE	canonical	3	65	junction_3	39.8580815728337	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCAGCAAGCCACCCTGT	NA	False	NA	NA	False	NA	NA	NA	73295294	73300639	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_73295425_73295724_73295902_73296748_73298438_73300515
H1_mix_00081746	chr7	+	387	1	FSM	ENSG00000273069.1	ENST00000608433.1	387	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTCTCGGTTCGAAAT	NA	False	NA	NA	False	ATTAAA	-15	NA	74606912	74607299	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_74606900_74607300
H1_mix_00081748	chr7	+	499	3	ISM	ENSG00000158517.16	ENST00000455062.2	1437	7	10742	2	4568	-1	3prime_fragment	FALSE	canonical	3	19	junction_2	2	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCGAGGCTCTGCAGGAAT	NA	False	NA	NA	False	AATAAA	-15	NA	74788010	74789313	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_74788089_74788558_74788705_74789038
H1_mix_00081749	chr7	+	2775	6	NNC	ENSG00000123965.13	novel	516	4	NA	NA	-3352	9934	intron_retention	FALSE	canonical	3	28	junction_5	7.95989949685296	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTCCAGGTGTGGTGG	NA	False	NA	NA	False	AATAAA	-29	NA	74890763	74907769	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_74890847_74894117_74894258_74896145_74896233_74897651_74897836_74900886_74900976_74905577
H1_mix_00081751	chr7	+	1392	7	NIC	ENSG00000223705.10	novel	1535	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	34	junction_2	137.668684408135	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	-8	True	NA	17	True	AATAAA	-18	NA	75410354	75416787	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_75410461_75410605_75410727_75414884_75415024_75415119_75415235_75415591_75415779_75415980_75416192_75416274
H1_mix_00081752	chr7	+	1160	7	NIC	ENSG00000223705.10	novel	1535	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	67	junction_6	132.851316223146	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATAGATCACAGTTTTTT	32	False	NA	16	True	AATAAA	-17	NA	75410394	75416786	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_75410461_75414884_75415024_75415119_75415235_75415591_75415779_75415980_75416192_75416274_75416416_75416485
H1_mix_00081753	chr7	+	1504	10	NIC	ENSG00000223705.10	novel	1535	11	NA	NA	18	0	intron_retention	FALSE	canonical	1	2	junction_2	141.325034696966	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATAGATCACAGTTTTTT	50	False	NA	16	True	AATAAA	-17	NA	75410412	75416786	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_75410461_75410605_75410727_75411654_75411760_75412788_75412933_75414884_75415024_75415119_75415235_75415591_75415771_75415980_75416192_75416274_75416416_75416485
H1_mix_00081754	chr7	+	1908	6	NNC	ENSG00000005486.17	novel	1878	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	226.816754231252	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCGTGCTGGCGTGTGC	-17	True	NA	11	True	TATAAA	-15	NA	75879033	75888921	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_75879261_75880245_75880316_75881364_75881487_75881828_75882237_75883697_75883849_75887991
H1_mix_00081755	chr7	+	569	3	FSM	ENSG00000146701.12	ENST00000490105.1	569	3	0	0	0	0	multi-exon	FALSE	canonical	1	24	junction_1	1277.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTGATGTGGTAGTTAT	4	True	NA	NA	False	NA	NA	NA	76048160	76057447	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_76048523_76054829_76054999_76057409
H1_mix_00081756	chr7	+	503	3	FSM	ENSG00000177679.16	ENST00000479294.2	549	3	46	0	46	0	multi-exon	FALSE	canonical	2	2	junction_2	2	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGCGGCCGCCGCGGCGG	13	False	NA	NA	False	NA	NA	NA	76235027	76260034	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_76235300_76248187_76248290_76259905
H1_mix_00081757	chr7	+	3094	10	ISM	ENSG00000177679.16	ENST00000611745.2	3617	15	58745	0	-4766	0	3prime_fragment	FALSE	canonical	2	9	junction_6	16.0554594383897	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTAGGTGGTGAGACCAGG	11	False	NA	21	True	AATAAA	-17	NA	76260640	76287287	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_76260904_76261351_76261415_76261545_76261582_76264764_76264816_76265363_76265469_76267257_76267436_76281440_76281803_76282647_76282873_76282963_76283102_76285614
H1_mix_00081758	chr7	+	1777	7	FSM	ENSG00000188372.15	ENST00000416245.5	1846	7	69	0	69	0	multi-exon	FALSE	canonical	2	2	junction_2	14.5028732785381	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAATATCTGGTCGTGG	67	False	NA	NA	False	AATAAA	-6	NA	76428706	76442062	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_76429634_76432926_76433031_76433469_76433648_76434037_76434156_76440249_76440342_76440474_76440612_76441841
H1_mix_00081759	chr7	+	2563	11	NIC	ENSG00000091073.20	novel	2641	11	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	67.8067843213347	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCAGGTCCTGAGTGTG	2	False	NA	16	True	AATAAA	-16	NA	76461710	76505991	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_76461837_76463544_76463710_76477113_76477179_76480420_76480778_76482507_76483148_76492152_76492254_76500440_76500521_76502297_76502457_76503425_76503588_76504355_76504446_76505373
H1_mix_00081764	chr7	+	4581	17	NIC	ENSG00000006576.16	novel	4793	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_10	36.1887413431305	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTGTTTTTTTTTTTAATT	20	True	NA	19	True	AATAAA	-16	NA	77798887	77957225	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_77798972_77840220_77840301_77893607_77893665_77900710_77900781_77901761_77901921_77908792_77908959_77910244_77910410_77920278_77920466_77922622_77922779_77929108_77929328_77940029_77940303_77940527_77940660_77942699_77942787_77949677_77949834_77951616_77951713_77953768_77953895_77954857
H1_mix_00081766	chr7	+	558	2	FSM	ENSG00000232756.1	ENST00000438324.1	558	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGCTTTCTGCATCTCCC	NA	False	NA	NA	False	NA	NA	NA	77990419	77995171	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_77990678_77994871
H1_mix_00081767	chr7	+	773	1	FSM	ENSG00000281008.1	ENST00000627965.1	773	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTGTGAGTTTTTGCAA	NA	False	NA	NA	False	AGTAAA	-18	NA	78134078	78134851	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_78134100_78134900
H1_mix_00081768	chr7	+	4368	4	FSM	ENSG00000234456.10	ENST00000657546.1	4687	4	-11	330	-11	-330	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGACATACTGTTAATGAC	11	True	NA	NA	False	AATAAA	-14	NA	79453603	79463576	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_79453656_79454885_79455008_79458846_79459000_79459535
H1_mix_00081770	chr7	+	687	2	Antisense	novelGene_ENSG00000170381.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	183	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGTGGTCTCTTCACA	NA	False	NA	25	True	AATAAA	-25	NA	83460003	83465350	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr7_+_83460267_83464926
H1_mix_00081771	chr7	+	797	2	Antisense	novelGene_ENSG00000170381.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	150	junction_1	0	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGGTGGTCTCTTCAC	NA	False	NA	24	True	AATAAA	-24	NA	83460024	83465349	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr7_+_83460267_83464794
H1_mix_00081772	chr7	+	3620	6	FSM	ENSG00000198822.11	ENST00000361669.7	4268	6	630	18	5	-18	multi-exon	FALSE	canonical	1	2	junction_4	3.74165738677394	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAAGGTTTTCCAGCATG	146	False	NA	NA	False	AATAAA	-39	NA	86644538	86864861	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_86644873_86765005_86765614_86786260_86787117_86838838_86839906_86850369_86850545_86864281
H1_mix_00081773	chr7	+	286	1	FSM	ENSG00000261462.1	ENST00000561473.1	1744	1	-205	1663	-205	-1663	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTTCTTATAAAGGGAC	NA	False	NA	NA	False	NA	NA	NA	87109333	87109619	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_87109300_87109600
H1_mix_00081775	chr7	+	3801	19	NNC	ENSG00000135164.19	novel	3702	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	71.6013699089585	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTTTTTACATAGCCT	8	True	NA	15	True	AATAAA	-24	NA	87152447	87196332	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_87152556_87163494_87163618_87164933_87165051_87166482_87166606_87167956_87168044_87170994_87171090_87173534_87173650_87174592_87174670_87179544_87179703_87181308_87181342_87182227_87182338_87184396_87184626_87185828_87185981_87188091_87188302_87190944_87191028_87193197_87193354_87193724_87194103_87194683_87194829_87195030
H1_mix_00081776	chr7	+	3540	17	NIC	ENSG00000135164.19	novel	3702	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_16	51.3864038438185	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGCAAGATTTGTTTTT	0	True	NA	6	True	AATAAA	-15	NA	87152467	87196323	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_87152556_87163494_87163618_87164933_87165051_87166482_87166606_87170994_87171090_87173534_87173650_87174592_87174670_87179544_87179703_87181308_87181342_87182227_87182338_87184396_87184626_87185828_87185981_87188091_87188302_87190944_87191028_87193197_87193354_87193724_87194103_87195030
H1_mix_00081781	chr7	+	2938	22	NIC	ENSG00000105792.19	novel	3902	23	NA	NA	34	-9	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	5.42982441680013	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAGCTGAATATATCTTT	11	False	NA	0	True	AATAAA	-15	NA	90245248	90310279	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_90245545_90255422_90255483_90258097_90258164_90261946_90262057_90265300_90265378_90268285_90268385_90271525_90271676_90271780_90271959_90273986_90274111_90277072_90277122_90277212_90277335_90279676_90279894_90282891_90283057_90286280_90286400_90288233_90288353_90297748_90297831_90299866_90300060_90303968_90304107_90304743_90304821_90306900_90307099_90307767_90307855_90310067
H1_mix_00081782	chr7	+	8537	8	FSM	ENSG00000105793.16	ENST00000417207.5	775	8	-10	-7752	-10	1236	multi-exon	FALSE	canonical	1	1	junction_3	48.1765460762468	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCCCAATGTCGGAGGT	-19	True	NA	NA	False	NA	NA	NA	90346684	90392689	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_90346775_90352815_90353010_90354457_90354550_90374301_90374355_90377506_90377615_90378133_90378212_90382955_90383080_90384891
H1_mix_00081783	chr7	+	6224	21	NNC	ENSG00000001629.10	novel	6340	20	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	19.7218153322659	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCATTTTGTCTCATTAC	-20	True	NA	14	True	ATTAAA	-19	NA	92245974	92401383	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_92246100_92246214_92246520_92294888_92295167_92307358_92307657_92319329_92319513_92327782_92327901_92343023_92343233_92344977_92345067_92350949_92351095_92352475_92352643_92362184_92362274_92371476_92371608_92386508_92386644_92387797_92387885_92387974_92388042_92389970_92390117_92391165_92391345_92392240_92392293_92396364_92396477_92397722_92397860_92398211
H1_mix_00081784	chr7	+	2559	5	NNC	ENSG00000127993.16	novel	4667	5	NA	NA	2	-35	at_least_one_novel_splicesite	TRUE	canonical	2	4	junction_4	65.3237131522696	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTTTACTGATAAAAATA	15	True	NA	-17	True	NA	NA	NA	92528808	92537970	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_92528925_92529475_92529667_92532403_92532550_92534401_92534971_92536433
H1_mix_00081785	chr7	+	2110	1	Intergenic	novelGene_1381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCAGAAGCCTACAGGACC	NA	False	NA	NA	False	NA	NA	NA	93640239	93642349	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_93640200_93642300
H1_mix_00081787	chr7	+	6623	2	FSM	ENSG00000242265.6	ENST00000488574.5	2587	2	-42	-3994	3	0	multi-exon	FALSE	canonical	3	27	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGTCCTGATCATTT	NA	False	NA	27	True	AATAAA	-30	NA	94656327	94669692	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_94656592_94663333
H1_mix_00081788	chr7	+	11867	20	NNC	ENSG00000158528.12	novel	3983	18	NA	NA	68	990	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	5.52957297495191	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTCTTAAACAACTGTTG	10	True	NA	NA	False	NA	NA	NA	94907742	95297405	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_94908140_94908387_94908595_94909897_94911509_95111258_95111392_95120711_95120833_95161866_95161972_95198348_95198485_95225960_95226117_95247472_95247527_95250025_95250256_95251761_95251859_95251958_95252131_95268549_95268708_95269206_95269508_95273898_95273987_95274084_95274169_95284017_95284217_95286205_95286326_95288535_95288719_95290090
H1_mix_00081789	chr7	+	2934	17	FSM	ENSG00000158560.14	ENST00000447467.6	2947	17	13	0	-12	0	multi-exon	FALSE	canonical	1	2	junction_4	4.06538359198735	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGCACCAGTGTGAGTA	-34	True	NA	4	True	AATAAA	-14	NA	95772566	96098424	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_95772774_95804720_95804838_95810391_95810507_95813246_95813338_95828056_95828117_95869882_95869999_95977511_95977602_95984814_95984978_95987055_95987156_95995947_95996074_96028174_96028322_96032666_96032781_96035618_96035753_96039276_96039422_96076056_96076198_96080362_96080489_96097482
H1_mix_00081790	chr7	+	260	2	Antisense	novelGene_ENSG00000284707.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTAAGCAATCATCATCTC	4339	False	NA	NA	False	ATTAAA	-12	NA	97876554	97881327	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr7_+_97876571_97881083
H1_mix_00081791	chr7	+	8704	13	NIC	ENSG00000164715.6	novel	8974	14	NA	NA	22	-5	combination_of_known_splicesites	FALSE	canonical	1	1	junction_12	18.6568054309651	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTTGGCCGCGTTTCTT	19	False	NA	NA	False	AATAAA	-21	NA	98106883	98209633	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_98107281_98137314_98137443_98141396_98141542_98151381_98151456_98154757_98154877_98159337_98159426_98171540_98171675_98185050_98185136_98186876_98186999_98190727_98190878_98191613_98194573_98203573_98203707_98205463
H1_mix_00081792	chr7	+	3281	2	FSM	ENSG00000180535.4	ENST00000609256.2	3262	2	-19	0	-19	0	multi-exon	FALSE	canonical	2	7	junction_1	0	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGGGAACCACGCGTTTT	NA	False	NA	28	True	AATAAA	-30	NA	98211419	98215457	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_98211499_98212255
H1_mix_00081793	chr7	+	12623	71	NIC	ENSG00000196367.14	novel	12677	72	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_13	41.1786649732552	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTCCCTTGTTTATGTT	-3	True	NA	NA	False	AATAAA	-18	NA	98878543	99013243	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_98878638_98881089_98881251_98881974_98882025_98890334_98890446_98892423_98892529_98893797_98893882_98895763_98895821_98897740_98897867_98899421_98899500_98899678_98899768_98900623_98900721_98903378_98903518_98906176_98906256_98908727_98908963_98910055_98910420_98910509_98910608_98911076_98911272_98912021_98912214_98915722_98915889_98917422_98917680_98921752_98921954_98925111_98925264_98927166_98927367_98929988_98930207_98930632_98930831_98931404_98931666_98933240_98933403_98935578_98935676_98937155_98937278_98937649_98937821_98942948_98943018_98948220_98948341_98948565_98948686_98949416_98949582_98949659_98949842_98950063_98950263_98950875_98951005_98953166_98953434_98955097_98955305_98956145_98956305_98956398_98956534_98957980_98958092_98959343_98959491_98961260_98961475_98962301_98962428_98964628_98964776_98965695_98965896_98967040_98967163_98967484_98967699_98970111_98970292_98971798_98971946_98976148_98976269_98976482_98976771_98976938_98977077_98978210_98978324_98978768_98978905_98981768_98981961_98983263_98983493_98984092_98984359_98984943_98985045_98988764_98988967_98990454_98990620_98992136_98992228_98993537_98993738_98994586_98994849_99004189_99004416_99005130_99005349_99008376_99008562_99011051_99011256_99011340_99011536_99012070
H1_mix_00081794	chr7	+	3233	5	FSM	ENSG00000196367.14	ENST00000468960.3	3898	5	0	665	0	-665	multi-exon	FALSE	canonical	0	0	junction_3	2.73861278752583	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCACTCCAGCCTGGGCA	NA	False	NA	NA	False	NA	NA	NA	99014617	99050166	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_99014956_99030884_99031001_99031344_99031466_99032893_99033040_99047654
H1_mix_00081798	chr7	+	4002	5	NIC	ENSG00000196652.12	novel	5083	7	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	33.759257989476	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTCTGAATCCCTGTC	-17	True	NA	10	True	AATAAA	-16	NA	99504645	99533822	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_99504734_99506004_99506459_99512452_99512592_99525812_99526419_99531107
H1_mix_00081799	chr7	+	5169	6	ISM	ENSG00000196652.12	ENST00000394170.6	4344	7	304	-285	0	285	3prime_fragment	FALSE	canonical	3	33	junction_3	29.3052896249124	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTCTTGCTGAAAGTCAC	-3	True	NA	3	True	AATAAA	-16	NA	99505253	99534107	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_99506459_99512452_99512592_99519826_99519910_99520168_99520305_99525812_99526419_99531107
H1_mix_00081800	chr7	+	5042	6	NNC	ENSG00000196652.12	novel	5083	7	NA	NA	124	285	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	35.874224730299	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTCTTGCTGAAAGTCAC	121	False	NA	3	True	AATAAA	-16	NA	99505377	99534107	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_99506459_99512452_99512592_99519826_99519910_99520171_99520305_99525812_99526419_99531107
H1_mix_00081801	chr7	+	10126	6	NNC	ENSG00000106261.17	novel	9403	6	NA	NA	-1	0	intron_retention	FALSE	canonical	3	9	junction_5	24.8354585220406	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTTGTGCTGGTTTGTTT	-4	True	NA	26	True	AATAAA	-20	NA	100015597	100041689	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_100015727_100023418_100023933_100024153_100024308_100029860_100029953_100030248_100031101_100033304
H1_mix_00081803	chr7	+	622	4	FSM	ENSG00000188186.11	ENST00000460732.5	616	4	-6	0	-5	0	multi-exon	FALSE	canonical	3	36	junction_3	708.091017376219	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	-15	True	NA	26	True	AATAAA	-21	NA	100148906	100154203	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100148976_100149498_100149580_100153399_100153518_100153849
H1_mix_00081804	chr7	+	524	3	FSM	ENSG00000188186.11	ENST00000474141.5	519	3	-5	0	-5	0	multi-exon	FALSE	canonical	2	6	junction_1	951.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	-15	True	NA	26	True	AATAAA	-21	NA	100148906	100154203	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100148976_100153399_100153518_100153866
H1_mix_00081805	chr7	+	789	7	FSM	ENSG00000066923.18	ENST00000479359.1	780	7	-9	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	2.91070819942883	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGGATACTGAGATCCAG	NA	False	NA	NA	False	NA	NA	NA	100200137	100202015	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100200329_100200452_100200543_100200768_100200970_100201089_100201161_100201263_100201352_100201785_100201867_100201948
H1_mix_00081806	chr7	+	1583	6	FSM	ENSG00000213413.2	ENST00000317271.2	1583	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGCTGTGCTTCTTCTTT	7550	False	NA	13	True	NA	NA	NA	100219235	100221490	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100219401_100219712_100220029_100220113_100220465_100220546_100220674_100220759_100220821_100220927
H1_mix_00081807	chr7	+	5205	15	NIC	ENSG00000272752.6	novel	2661	17	NA	NA	0	0	intron_retention	TRUE	canonical	3	67	junction_4	76.5316061159955	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAGCAGTGCAAAGAGTT	-1	True	NA	12	True	ATTAAA	-25	NA	100336122	100367663	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_100336338_100338178_100338265_100338772_100338890_100345864_100345969_100349730_100352479_100352563_100352915_100352996_100353124_100353209_100353271_100353372_100353484_100355142_100355241_100356749_100356884_100358219_100358367_100358689_100359080_100359336_100359538_100367348
H1_mix_00081809	chr7	+	301	2	FSM	ENSG00000240211.1	ENST00000475250.1	303	2	0	2	0	-2	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTCTATTATCTCATTG	13	False	NA	NA	False	NA	NA	NA	100436203	100438502	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100436383_100438380
H1_mix_00081811	chr7	+	262	2	FSM	ENSG00000146828.18	ENST00000461016.1	262	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATCAGCCTGTGGCCCCC	NA	False	NA	NA	False	NA	NA	NA	100826819	100859918	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_100827048_100859884
H1_mix_00081812	chr7	+	2811	11	NIC	ENSG00000146828.18	novel	3315	14	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	24.1124449195846	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACAGGCTGGCTGAGCAG	-19	True	NA	10	True	AATAAA	-11	NA	100852722	100867006	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_100852836_100856867_100857177_100858834_100858943_100859049_100859162_100859884_100860043_100860149_100860233_100861137_100861263_100861391_100861585_100861736_100861912_100862680_100862828_100865718
H1_mix_00081814	chr7	+	3000	21	NIC	ENSG00000087087.20	novel	2964	20	NA	NA	1	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_18	311.357447317388	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTCTCGTGTGTTA	15	True	NA	15	True	AATAAA	-16	NA	100875163	100888664	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_100875329_100875572_100875713_100880695_100880770_100881284_100881414_100881658_100881806_100882052_100882242_100884069_100884240_100884367_100884553_100884739_100884839_100884922_100885041_100885215_100885371_100885700_100885763_100885862_100885942_100886246_100886436_100886794_100886969_100887046_100887201_100887319_100887514_100887702_100887860_100888041_100888144_100888256_100888384_100888473
H1_mix_00081818	chr7	+	3075	4	Fusion	ENSG00000288749.1_ENSG00000232301.3	novel	826	2	NA	NA	-7570	1	multi-exon	FALSE	canonical	1	15	junction_1	123.936363599317	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTTTATGAGGTCGATTT	NA	False	NA	32	True	ATTAAA	-33	NA	101291987	101304579	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_+_101292003_101299636_101299867_101300768_101303029_101304009
H1_mix_00081820	chr7	+	1673	1	FSM	ENSG00000272219.1	ENST00000606640.1	1779	1	-1271	1377	-1271	-1377	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGATACAGCTACTTCGGA	NA	False	NA	NA	False	AAAAAG	-39	NA	101958844	101960517	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_101958800_101960500
H1_mix_00081822	chr7	+	2237	9	NNC	ENSG00000160999.11	novel	2236	9	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	67.6387462923434	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGGCTCTCCTGTCGTCCT	-32	True	NA	11	True	ATTAAA	-21	NA	102286862	102321711	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_102287091_102300521_102301280_102306720_102306823_102308814_102308907_102314335_102314428_102314511_102314683_102317186_102317396_102320330_102320503_102321298
H1_mix_00081823	chr7	+	5147	8	NIC	ENSG00000160999.11	novel	2236	9	NA	NA	24	0	intron_retention	FALSE	canonical	3	138	junction_1	30.6966726907936	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGGCTCTCCTGTCGTCCT	-3	True	NA	11	True	ATTAAA	-21	NA	102286891	102321711	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_102287095_102300521_102301280_102306720_102306823_102308814_102308907_102314335_102314428_102314511_102314683_102317186_102320503_102321298
H1_mix_00081824	chr7	+	3311	8	NNC	ENSG00000160999.11	novel	2113	9	NA	NA	12349	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_4	61.8279376782941	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGGCTCTCCTGTCGTCCT	5994	False	NA	11	True	ATTAAA	-21	NA	102299216	102321711	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_102301280_102306720_102306823_102308814_102308907_102314335_102314428_102314514_102314683_102317186_102317396_102320330_102320503_102321298
H1_mix_00081825	chr7	+	2243	5	NIC	ENSG00000239969.6	novel	602	5	NA	NA	-227	16768	combination_of_known_splicesites	FALSE	canonical	3	46	junction_4	18.364367672207	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTGGTGGTGTACGCCT	49	False	NA	7	True	AATAAA	-10	NA	102363934	102397401	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_102364412_102365973_102366077_102375822_102375950_102376211_102376323_102395976
H1_mix_00081827	chr7	+	2093	15	NIC	ENSG00000161036.13	novel	2160	15	NA	NA	0	-83	combination_of_known_junctions	TRUE	canonical	3	11	junction_1	43.2104484719015	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAACTTATTCAGCTTTG	8	True	NA	-65	True	NA	NA	NA	102464983	102473083	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_102465179_102465816_102466052_102466153_102466271_102467338_102467480_102467718_102467824_102468061_102468188_102468262_102468378_102468553_102468655_102468854_102469063_102469573_102469647_102469741_102469883_102472217_102472310_102472453_102472610_102472691_102472805_102472908
H1_mix_00081828	chr7	+	2211	8	FSM	ENSG00000222011.9	ENST00000413034.3	2211	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.5195728954486	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTACTGATTCTTAATA	-20	True	NA	15	True	AATAAA	-19	NA	102748998	102809225	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_102749659_102751691_102751802_102757853_102757947_102761272_102761412_102772408_102772451_102777252_102777349_102787334_102787470_102808289
H1_mix_00081831	chr7	+	582	1	FSM	ENSG00000223886.3	ENST00000493920.1	463	1	-168	49	-168	-49	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCAGCAGAACCGACTGG	NA	False	NA	NA	False	AAAACA	-4	NA	105530040	105530622	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_105530000_105530600
H1_mix_00081832	chr7	+	2740	5	NNC	ENSG00000128536.16	novel	993	4	NA	NA	-74	-1146	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	7.43303437365925	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAGAAACCTTGCTTCGT	327	False	NA	NA	False	AATAAA	-16	NA	105876721	105923037	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_105877258_105911016_105911242_105912482_105912639_105919534_105919608_105921287
H1_mix_00081833	chr7	+	1020	2	NIC	ENSG00000128536.16	novel	1603	4	NA	NA	2	-18	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGCTCTTTATATTTTA	-11	True	NA	NA	False	AATGAA	-4	NA	105876797	105890085	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_105877258_105889525
H1_mix_00081834	chr7	+	3296	16	NNC	ENSG00000128536.16	novel	6448	19	NA	NA	11548	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2.29975844142138	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTTGTACATGTCTTT	NA	False	NA	6	True	AATAAA	-21	NA	105974843	106033776	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_105975047_105980967_105981134_105984191_105984290_105994750_105994846_105996249_105996355_106001461_106001611_106004497_106004688_106012859_106013032_106015110_106015218_106015926_106016026_106022197_106022449_106024380_106024563_106026681_106026696_106028550_106028583_106030791_106030841_106032392
H1_mix_00081835	chr7	+	254	2	FSM	ENSG00000128536.16	ENST00000471910.1	392	2	0	138	0	1	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGCACACTTTGAAAGTT	NA	False	NA	NA	False	NA	NA	NA	106001546	106004687	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_106001611_106004497
H1_mix_00081837	chr7	+	6661	13	FSM	ENSG00000288558.2	ENST00000673720.1	6660	13	-5	4	-5	-4	multi-exon	FALSE	canonical	3	11	junction_6	82.3240126303107	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTGCATGCTCAACTT	-7	True	NA	4	True	ATTAAA	-16	NA	107563965	107623313	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_107564210_107567049_107567187_107571144_107571267_107573703_107573822_107575187_107575311_107576365_107576593_107580758_107580865_107583881_107583983_107593954_107594106_107595866_107596003_107600396_107600506_107613331_107613433_107618327
H1_mix_00081838	chr7	+	2280	6	FSM	ENSG00000105865.11	ENST00000436411.5	2280	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	20.013995103427	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTAACTTTAAAGTCCCA	26	True	NA	NA	False	TTTAAA	-32	NA	107563998	107578305	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_107564677_107567049_107567187_107571144_107571267_107575187_107575311_107576365_107576593_107577312
H1_mix_00081839	chr7	+	1660	8	NIC	ENSG00000105865.11	novel	2266	8	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	22.4171945667806	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTAATACTAAGAAATTAT	27	True	NA	NA	False	AATAAA	-1	NA	107563999	107577908	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_107564248_107564587_107564677_107567049_107567187_107571144_107571267_107573703_107573822_107575187_107575311_107576365_107576593_107577312
H1_mix_00081842	chr7	+	234	2	Antisense	novelGene_ENSG00000091138.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGAGACAGGGTCTTGC	NA	False	NA	NA	False	NA	NA	NA	107764315	107770269	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr7_+_107764474_107770193
H1_mix_00081844	chr7	+	6421	19	NIC	ENSG00000128573.27	novel	2598	20	NA	NA	-89	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	6.91861864468749	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATAGGATTTTATTCTTT	1312	False	NA	13	True	AATAAA	-31	NA	114087657	114693772	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_114087839_114162943_114163089_114288018_114288110_114426501_114426680_114534616_114534707_114628539_114628678_114629804_114630006_114631527_114631706_114642409_114642624_114644684_114644790_114652202_114652291_114653925_114654010_114658065_114658268_114659355_114659433_114659571_114659674_114662064_114662187_114663449_114663520_114664272_114664437_114689781
H1_mix_00081845	chr7	+	5423	21	NNC	ENSG00000105976.16	novel	741	6	NA	NA	-102	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	11.0140818954646	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTGTATACTGATAGTG	NA	False	NA	8	True	ATTAAA	-15	NA	116724043	116798377	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_116724165_116724771_116724848_116731667_116731860_116739949_116740085_116740851_116741026_116755354_116755516_116757436_116757540_116757637_116757775_116758458_116758621_116759390_116759491_116763049_116763269_116769644_116769792_116771497_116771655_116771848_116771990_116774880_116775112_116777388_116777470_116778775_116778958_116781987_116782098_116783303_116783470_116795654_116795792_116795886
H1_mix_00081860	chr7	+	2303	7	ISM	ENSG00000158457.6	ENST00000486685.3	2951	8	-12	872	-12	-3	intron_retention	FALSE	canonical	3	411	junction_5	15.6702123647242	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCTACGCGGGACTCCAT	-33	True	NA	20	True	AATAAA	-13	NA	129144694	129168827	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_129145083_129161678_129161737_129162393_129162522_129162832_129162908_129164473_129164570_129166777_129166907_129167398
H1_mix_00081868	chr7	+	1896	2	FSM	ENSG00000146856.14	ENST00000470839.1	574	2	0	-1322	0	1322	multi-exon	FALSE	canonical	3	44	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTGTGTGGACATCTTG	75	False	NA	9	True	AATAAA	-20	NA	134986603	134989686	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_134986702_134987888
H1_mix_00081875	chr7	+	562	2	Intergenic	novelGene_1410	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGCTTCTACTTTCCT	659	False	NA	16	True	AATAAA	-18	NA	139036124	139036950	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_139036389_139036652
H1_mix_00081879	chr7	+	673	7	FSM	ENSG00000106028.11	ENST00000484178.5	676	7	3	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1512.49800734488	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTAATAATCTTTTTTCT	5	False	NA	17	True	ATTAAA	-19	NA	141738602	141750461	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_141738679_141739123_141739191_141742168_141742230_141743560_141743702_141743901_141743990_141745495_141745585_141750310
H1_mix_00081882	chr7	+	874	4	Fusion	ENSG00000211764.1_ENSG00000211772.11	novel	758	4	NA	NA	2	-1	multi-exon	FALSE	canonical	0	0	junction_2	100.499861802006	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGAGTGTCTGTGGAGTT	5	True	NA	24	True	AATAAA	-28	NA	142796366	142802747	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_+_142796415_142801040_142801428_142802017_142802212_142802502
H1_mix_00081883	chr7	+	681	3	Fusion	ENSG00000211764.1_ENSG00000211772.11	novel	758	4	NA	NA	2	0	multi-exon	FALSE	canonical	0	0	junction_2	65.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTGTCTGTGGAGTTC	5	True	NA	25	True	AATAAA	-29	NA	142796366	142802748	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_+_142796415_142801040_142801428_142802502
H1_mix_00081884	chr7	+	952	5	Fusion	ENSG00000211766.1_ENSG00000211767.1_ENSG00000211772.11	novel	758	4	NA	NA	4	-1	multi-exon	FALSE	canonical	3	41	junction_1	86.1191035717395	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGAGTGTCTGTGGAGTT	11	True	NA	24	True	AATAAA	-28	NA	142796700	142802747	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_+_142796896_142801040_142801428_142801943_142801962_142802104_142802212_142802502
H1_mix_00081885	chr7	+	828	3	Fusion	ENSG00000211766.1_ENSG00000211767.1_ENSG00000211772.11	novel	758	4	NA	NA	4	0	multi-exon	FALSE	canonical	0	0	junction_2	20.5	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTGTCTGTGGAGTTC	11	True	NA	25	True	AATAAA	-29	NA	142796700	142802748	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_+_142796896_142801040_142801428_142802502
H1_mix_00081886	chr7	+	677	3	Fusion	ENSG00000211768.1_ENSG00000211772.11	novel	758	4	NA	NA	6	0	multi-exon	FALSE	canonical	0	0	junction_2	12	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTGTCTGTGGAGTTC	-1	True	NA	25	True	AATAAA	-29	NA	142797003	142802748	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_+_142797048_142801040_142801428_142802502
H1_mix_00081895	chr7	+	993	3	NIC	ENSG00000244198.7	novel	556	3	NA	NA	113	-5702	combination_of_known_splicesites	FALSE	canonical	3	46	junction_1	34.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGCAAATCCTCGAGCTT	NA	False	NA	NA	False	AGTAAA	-22	NA	144196000	144208521	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_144196058_144200170_144200278_144207692
H1_mix_00081897	chr7	+	5148	12	ISM	ENSG00000050327.15	ENST00000056217.10	5482	15	0	4381	0	-3805	5prime_fragment	FALSE	canonical	3	138	junction_9	19.1134066573593	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGCCTGCAATAATGAACA	-4	True	NA	NA	False	TATAAA	-12	NA	144355401	144376251	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_144355502_144362657_144365824_144366354_144366413_144366845_144366911_144367101_144367356_144371160_144371322_144371876_144372030_144372298_144372429_144372682_144372758_144373194_144373285_144374731_144374890_144375513
H1_mix_00081898	chr7	+	3315	10	ISM	ENSG00000050327.15	ENST00000474817.5	2968	13	61	4425	61	-3850	5prime_fragment	FALSE	canonical	3	138	junction_8	21.0102855469751	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACATTTTTGAGAGTATTA	9564	False	NA	NA	False	AATAAA	-22	NA	144364969	144376206	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_144365824_144366354_144366413_144366845_144366911_144367101_144367356_144371160_144371322_144371876_144372030_144372298_144372429_144372682_144372758_144373194_144373285_144374731
H1_mix_00081899	chr7	+	2898	21	FSM	ENSG00000055130.18	ENST00000671397.1	2888	21	-10	0	0	0	multi-exon	FALSE	canonical	2	9	junction_6	138.987445476201	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGATTTCTGTACAAGTC	-11	True	NA	3	True	AATAAA	-8	NA	148698896	148801019	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_148699030_148729961_148730263_148753975_148754151_148756982_148757151_148759303_148759355_148759547_148759639_148766560_148766724_148767618_148767750_148783782_148783891_148783970_148784078_148786550_148786600_148786988_148787121_148788556_148788675_148789749_148789827_148790309_148790442_148792725_148792819_148797811_148797860_148797936_148798020_148798571_148798678_148799274_148799389_148800501
H1_mix_00081901	chr7	+	1482	9	NIC	ENSG00000244560.7	novel	2804	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	12.3490890352285	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCATTCTCAATTTTAATG	-1	True	NA	10	True	AATAAA	-18	NA	149285280	149297302	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_149285497_149287564_149287777_149289937_149290039_149292210_149292309_149293376_149293493_149293750_149293843_149294379_149294413_149294539_149294902_149297050
H1_mix_00081902	chr7	+	4125	6	NNC	ENSG00000244560.7	novel	2804	10	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	14.532721699668	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCATTCTCAATTTTAATG	-1	True	NA	10	True	AATAAA	-18	NA	149285280	149297302	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_149285956_149287564_149287777_149289937_149290039_149292210_149292309_149293376_149293493_149294379
H1_mix_00081903	chr7	+	4805	6	ISM	ENSG00000244560.7	ENST00000416232.5	2804	10	1000	10	1000	0	intron_retention	FALSE	canonical	1	5	junction_1	12.4803846094582	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCATTCTCAATTTTAATG	3387	False	NA	10	True	AATAAA	-18	NA	149288698	149297302	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_+_149289458_149289547_149289727_149289937_149290039_149292210_149292309_149293376_149293493_149293750
H1_mix_00081907	chr7	+	3144	3	NIC	ENSG00000214022.12	novel	3130	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	14	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGGCTGGGGAGTGTTA	71	False	NA	27	True	AATAAA	-16	NA	150368896	150374039	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_+_150369034_150369670_150369869_150371230
H1_mix_00081915	chr7	+	914	5	NNC	ENSG00000243836.6	novel	751	6	NA	NA	-461	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.5463018110418	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCTTTGTGTAAGATGAT	847	False	NA	31	True	AATAAA	-33	NA	151410100	151413048	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_151410373_151411227_151411313_151411669_151411793_151411966_151412071_151412718
H1_mix_00081918	chr7	+	6813	12	NNC	ENSG00000146909.8	novel	6082	11	NA	NA	16	2009	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	21.0905172377391	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTTTAGTTTTGCTTG	4	True	NA	NA	False	NA	NA	NA	156949727	156975185	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_+_156950725_156952473_156952599_156954102_156954299_156959850_156960175_156962150_156962262_156963007_156963176_156963904_156964027_156966269_156966403_156966960_156967093_156969086_156969197_156969528_156973220_156974481
H1_mix_00081920	chr7	-	1876	3	NNC	ENSG00000232325.4	novel	877	3	NA	NA	-431	560	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	4	22	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGCCAGTTGTATTAGA	NA	False	NA	NA	False	AATAAA	-20	NA	96114	70411	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_71572_75531_75697_95563
H1_mix_00081921	chr7	-	3253	6	NNC	ENSG00000197461.13	novel	2305	6	NA	NA	-54	898	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	5.00399840127872	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTCTCTCCCTACTTAC	1225	False	NA	NA	False	NA	NA	NA	519463	496359	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_498575_501115_501243_510808_510997_512350_512456_517397_517491_518938
H1_mix_00081922	chr7	-	1111	9	ISM	ENSG00000188191.15	ENST00000360274.8	2007	11	-39	29506	-39	0	5prime_fragment	FALSE	canonical	3	80	junction_8	137.59809001218	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGACGTGCTTCCCACGT	600	False	NA	NA	False	NA	NA	NA	712611	579255	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_579378_584507_584569_596145_596305_606192_606240_607390_607453_677228_677321_680555_680727_711328_711528_712413
H1_mix_00081923	chr7	-	276	2	NIC	ENSG00000188191.15	novel	602	2	NA	NA	17	-7	combination_of_known_splicesites	FALSE	canonical	3	25	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACCATCCATGCATACT	20	True	NA	-10	True	AATAAA	-10	NA	727264	716625	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_716847_727209
H1_mix_00081925	chr7	-	714	2	FSM	ENSG00000240230.6	ENST00000466146.1	714	2	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_1	0	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTAACCAGAACTCACCAAC	-11	True	NA	NA	False	AATAGA	-40	NA	975549	972700	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_973293_975427
H1_mix_00081926	chr7	-	978	3	FSM	ENSG00000178381.12	ENST00000484977.1	1084	3	0	106	0	-106	multi-exon	FALSE	canonical	3	150	junction_1	8.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGACTTGTTGTTGACT	0	True	NA	NA	False	NA	NA	NA	1160219	1157128	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_1157751_1158157_1158258_1159963
H1_mix_00081927	chr7	-	544	2	FSM	ENSG00000178381.12	ENST00000478137.1	557	2	13	0	13	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTACGTCTCTTCCAT	22	False	NA	NA	False	NA	NA	NA	1160746	1160025	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_1160485_1160661
H1_mix_00081928	chr7	-	1177	5	ISM	ENSG00000164877.19	ENST00000471899.5	899	7	280	-4	-217	-2	intron_retention	FALSE	canonical	1	2	junction_1	16.5887763261791	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTCCTACGTGCCTCCGT	8043	False	NA	-3	True	AATAAA	-21	NA	1438682	1434361	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_1434673_1436741_1436857_1437534_1437609_1437889_1437981_1438096
H1_mix_00081929	chr7	-	505	3	NNC	ENSG00000164877.19	novel	5248	16	NA	NA	38	-2861	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	11	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCATGGTGAAACCTCGT	173	False	NA	NA	False	ATTAAA	-17	NA	1459327	1449517	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_1449830_1450239_1450289_1459183
H1_mix_00081930	chr7	-	245	2	FSM	ENSG00000164880.16	ENST00000479671.1	245	2	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGCCTGGCCCTGCGCTC	8553	False	NA	NA	False	NA	NA	NA	1471761	1471170	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_1471225_1471570
H1_mix_00081932	chr7	-	2561	18	NIC	ENSG00000002822.16	novel	2762	19	NA	NA	46	14	combination_of_known_junctions	TRUE	canonical	3	26	junction_17	67.4198742683994	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTATCTGTGGCCTAGCCC	9293	False	NA	5	True	AATAAA	-32	NA	2232899	1815778	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_1816229_1898199_1898391_1936686_1936898_1957628_1957720_1980452_1980542_2002064_2002122_2014501_2014643_2069193_2069339_2149151_2149239_2213211_2213274_2215884_2216000_2216156_2216288_2217961_2218044_2219331_2219457_2222574_2222755_2229983_2230144_2230548_2230765_2232871
H1_mix_00081933	chr7	-	2534	18	NIC	ENSG00000002822.16	novel	2695	19	NA	NA	36	14	combination_of_known_junctions	FALSE	canonical	3	53	junction_15	49.8632038716529	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTATCTGTGGCCTAGCCC	5	True	NA	5	True	AATAAA	-32	NA	2232909	1815778	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_1816229_1898199_1898391_1936686_1936898_1957628_1957720_1980452_1980542_2002064_2002122_2014501_2014643_2069193_2069339_2149151_2149239_2213211_2213274_2215884_2216000_2216156_2216288_2217961_2218044_2219331_2219457_2222574_2222755_2229983_2230144_2230548_2230728_2232871
H1_mix_00081934	chr7	-	1741	3	NNC	ENSG00000122687.19	novel	1819	3	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_2	6	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTCATGCTTTGAAGTT	23	True	NA	-7	True	AATAAA	-27	NA	2242169	2234196	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_2235565_2239529_2239708_2241974
H1_mix_00081935	chr7	-	1426	2	Intergenic	novelGene_1329	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGTATAACGATTTACGG	14	True	NA	-6	True	AATAAA	-20	NA	2354046	2320026	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_-_2321405_2353998
H1_mix_00081936	chr7	-	475	3	Genic_Genomic	ENSG00000106266.11	novel	583	4	NA	NA	233	-58040	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGATCACAGGTGTGAGC	1516	False	NA	NA	False	NA	NA	NA	2354076	2336153	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr7_-_2336388_2337118_2337280_2353996
H1_mix_00081938	chr7	-	5513	26	NNC	ENSG00000198286.10	novel	4287	25	NA	NA	119	1305	at_least_one_novel_splicesite	TRUE	canonical	1	3	junction_24	20.8716458383138	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGCCTGTAGCATTTT	218	False	NA	NA	False	AATAAA	-43	NA	3043726	2904836	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_2906843_2910049_2910166_2912171_2912297_2913286_2913467_2915236_2915373_2917289_2917386_2918490_2918588_2919371_2919613_2922633_2922761_2923131_2923334_2924232_2924366_2926738_2926792_2928597_2928696_2929991_2930075_2932534_2932587_2934452_2934630_2937036_2937235_2937906_2938033_2938678_2938832_2939748_2939929_2944211_2944538_2945818_2945957_2947574_2947788_2958499_2958632_2980515_2980581_3043666
H1_mix_00081940	chr7	-	2589	2	Genic_Genomic	ENSG00000270822.1	novel	165	1	NA	NA	0	3323	multi-exon	FALSE	non_canonical	0	0	junction_1	0	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCAGGCTGGAGTGCAGA	NA	False	NA	NA	False	NA	NA	NA	5009328	5005840	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr7_-_5006218_5007116
H1_mix_00081941	chr7	-	3109	12	NIC	ENSG00000182095.15	novel	10839	30	NA	NA	2896	-992	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	12.1390020965822	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCCGGCCCTCCAGGCT	NA	False	NA	NA	False	NA	NA	NA	5329982	5307802	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_5308313_5308874_5308950_5309131_5309369_5312502_5313864_5314983_5315149_5315955_5316073_5320317_5320427_5320531_5320608_5321072_5321191_5324213_5324356_5325095_5325249_5329936
H1_mix_00081942	chr7	-	6226	16	ISM	ENSG00000182095.15	ENST00000399537.8	10572	30	2076	44497	2076	715	internal_fragment	FALSE	canonical	0	0	junction_10	4.71121593174793	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCCTTGTCTCTCTT	6622	False	NA	NA	False	ATTAAA	-27	NA	5421470	5351286	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_5352095_5356915_5357277_5359397_5359570_5361593_5361723_5361896_5362034_5362649_5362826_5370374_5371365_5374054_5374485_5376033_5376225_5376846_5376994_5377370_5377577_5377921_5378025_5387671_5389337_5390484_5390629_5394439_5394596_5421059
H1_mix_00081944	chr7	-	1118	1	Genic_Genomic	ENSG00000155034.20	novel	NA	NA	NA	NA	11625	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGTCCTCACGGCTCTC	NA	False	NA	1	True	AATAAA	-21	NA	5490294	5489176	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr7_-_5489200_5490300
H1_mix_00081946	chr7	-	2708	15	NNC	ENSG00000122512.16	novel	2765	15	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_11	30.183875273573	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGGAGCATTGCTTGCAA	1	True	NA	-6	True	AATACA	-44	NA	6009039	5973241	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_5973543_5977587_5977758_5978595_5978697_5982823_5982992_5986758_5987621_5989799_5989956_5991972_5992058_5995533_5995634_5997325_5997424_5999107_5999276_6002452_6002637_6003742_6003793_6003971_6004059_6005891_6006027_6008996
H1_mix_00081947	chr7	-	4824	5	ISM	ENSG00000008256.16	ENST00000350796.8	4482	13	100808	0	0	0	intron_retention	FALSE	canonical	3	58	junction_2	3.96074487943871	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCTAAGACTTGGTTCT	1203	False	NA	NA	False	AATAAA	-21	NA	6171816	6161778	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_6165017_6165272_6165428_6165544_6165617_6165733_6165811_6170534
H1_mix_00081948	chr7	-	2047	2	FSM	ENSG00000178397.13	ENST00000530143.1	558	2	-65	-1424	-59	7	multi-exon	FALSE	canonical	2	10	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTGGTTCTTCTTGTGT	NA	False	NA	-4	True	AATAAA	-44	NA	6349040	6329403	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_6331236_6348825
H1_mix_00081949	chr7	-	5768	3	FSM	ENSG00000136240.10	ENST00000454368.2	2478	3	-2617	-673	-2617	0	multi-exon	FALSE	canonical	3	972	junction_2	51.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTATTGAGGTGTTTG	1251	False	NA	-11	True	AATAAA	-18	NA	6473023	6461088	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_6463176_6466070_6466324_6469595
H1_mix_00081950	chr7	-	587	1	FSM	ENSG00000231359.3	ENST00000496556.1	306	1	36	-317	36	317	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGAAGTTTTCTTTTTT	NA	False	NA	NA	False	AATAAA	-26	NA	6491062	6490475	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_6490500_6491100
H1_mix_00081951	chr7	-	1281	5	NIC	ENSG00000164631.19	novel	5075	5	NA	NA	7	-1663	intron_retention	FALSE	canonical	2	5	junction_2	28.1280553895928	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTCTGTAAAAAGTCAAAAT	93	False	NA	NA	False	AATGAA	-31	NA	6706836	6692111	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_6692704_6697338_6697435_6697688_6697812_6705158_6705224_6706431
H1_mix_00081953	chr7	-	351	1	FSM	ENSG00000273252.1	ENST00000609433.1	375	1	85	-61	85	61	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCAGCCATCATGAACCC	NA	False	NA	NA	False	NA	NA	NA	6835709	6835358	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_6835400_6835700
H1_mix_00081955	chr7	-	473	5	NNC	ENSG00000189043.10	novel	2035	4	NA	NA	0	54462	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5167.76668397481	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAGTCCCCAAAGCAATC	79	False	NA	NA	False	AAAAAG	-1	NA	10940079	10877480	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_10877506_10933455_10933693_10938089_10938148_10938807_10938897_10940015
H1_mix_00081956	chr7	-	4402	12	FSM	ENSG00000006468.14	ENST00000405192.6	4402	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	53.1581143755772	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCAGAACATTTTTCTCA	-4	True	NA	-7	True	AATAAA	-17	NA	13989676	13893029	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_13896088_13900737_13900840_13906429_13906600_13909631_13909701_13931501_13931750_13935707_13935897_13939116_13939247_13977426_13977481_13986637_13986686_13988085_13988174_13989007_13989140_13989562
H1_mix_00081958	chr7	-	3651	25	FSM	ENSG00000136267.14	ENST00000407950.5	3651	25	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_4	3.06611181574754	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATGCTTGAGAGAAATGG	812	False	NA	NA	False	TTTAAA	-43	NA	14902842	14148308	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_14149239_14176838_14176900_14178030_14178152_14338514_14338711_14345300_14345392_14478160_14478226_14574211_14574373_14580861_14580952_14583051_14583138_14607433_14607509_14613339_14613414_14621377_14621495_14630235_14630269_14672928_14673028_14682552_14682670_14682752_14682842_14685244_14685363_14694074_14694195_14698094_14698170_14701680_14701731_14718541_14718686_14736040_14736195_14757654_14757732_14841193_14841451_14902591
H1_mix_00081959	chr7	-	1204	1	FSM	ENSG00000272361.2	ENST00000607795.2	599	1	-812	207	-812	-207	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTATTGTTTTAAGTAAAA	NA	False	NA	NA	False	NA	NA	NA	16595036	16593832	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_16593800_16595000
H1_mix_00081960	chr7	-	2608	11	FSM	ENSG00000106524.9	ENST00000447802.3	2599	11	0	-9	0	6	multi-exon	FALSE	canonical	0	0	junction_3	49.0183639057853	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGTTTTATAATTTGCT	6	True	NA	-12	True	AATAAA	-26	NA	16645755	16599772	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_16600946_16602379_16602510_16603548_16603661_16604720_16604850_16609629_16609766_16610548_16610764_16615743_16615905_16624982_16625082_16627039_16627179_16636390_16636456_16645506
H1_mix_00081961	chr7	-	237	3	ISM	ENSG00000237921.2	ENST00000418764.2	369	4	856	-74	856	74	3prime_fragment	FALSE	canonical	1	1	junction_1	7.5	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCATCTTTCCTCGTTTTT	NA	False	NA	-4	True	AATAAA	-26	NA	19817234	19813610	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_19813725_19816202_19816315_19817223
H1_mix_00081962	chr7	-	1972	6	NNC	ENSG00000243004.7	novel	799	6	NA	NA	-311	21348	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	253.091762015282	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCAACTCTTGGTTGTG	1983	False	NA	NA	False	AATAAA	-15	NA	20123427	19897632	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_19898748_19960921_19960995_19968153_19968396_20028918_20028960_20045502_20045562_20122985
H1_mix_00081963	chr7	-	919	6	NNC	ENSG00000243004.7	novel	799	6	NA	NA	-311	20278	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	245.137838776473	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTGGCATAGAGGGGGC	1983	False	NA	NA	False	AAGAAA	-16	NA	20123427	19898702	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_19898748_19960921_19960995_19968136_19968396_20028918_20028960_20045502_20045562_20122985
H1_mix_00081965	chr7	-	879	7	NNC	ENSG00000243004.7	novel	955	7	NA	NA	662	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_6	239.316155372391	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTCTATTTATTTACT	3000	False	NA	-1	True	AATAAA	-14	NA	20122410	19918980	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_19919261_19919865_19919978_19960921_19960995_19968153_19968396_20028918_20028960_20045502_20045562_20122338
H1_mix_00081966	chr7	-	1249	7	NIC	ENSG00000243004.7	novel	955	7	NA	NA	-311	0	combination_of_known_junctions	FALSE	canonical	3	224	junction_1	198.858757804517	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTCTATTTATTTACT	1983	False	NA	-1	True	AATAAA	-14	NA	20123427	19918980	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_19919261_19919865_19919978_19960921_19960995_19968153_19968396_20028918_20028960_20045502_20045562_20122985
H1_mix_00081968	chr7	-	3215	6	NIC	ENSG00000243004.7	novel	743	6	NA	NA	-311	2113	combination_of_known_junctions	FALSE	canonical	3	117	junction_1	219.189963273869	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGCGTCTTTCTTTTCTC	1983	False	NA	-3	True	AATAAA	-14	NA	20123427	19928957	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_19931299_19960921_19960995_19968136_19968396_20028918_20028960_20045502_20045562_20122985
H1_mix_00081969	chr7	-	2133	1	Intergenic	novelGene_1343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGACTTAGTATGTTTT	NA	False	NA	NA	False	ATTAAA	-27	NA	19948193	19946060	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_-_19946100_19948200
H1_mix_00081970	chr7	-	1469	5	NIC	ENSG00000243004.7	novel	743	6	NA	NA	-21	-16753	combination_of_known_junctions	FALSE	canonical	3	234	junction_1	179.767905923165	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCTCTGTGTTAGTCTG	227	False	NA	-8	True	AATATA	-13	NA	20125183	19959971	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_19960995_19968153_19968396_20028918_20028960_20045502_20045562_20125079
H1_mix_00081971	chr7	-	1480	6	NNC	ENSG00000243004.7	novel	743	6	NA	NA	-21	-16853	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_5	251.245218859981	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTTACCATGTATTTTC	227	False	NA	-54	True	NA	NA	NA	20125183	19960071	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_19960995_19968153_19968396_20028918_20028960_20045502_20045562_20122985_20123097_20125079
H1_mix_00081972	chr7	-	3776	1	ISM	ENSG00000183742.13	ENST00000400331.10	9153	7	78904	50	46598	-50	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCATTTAACTTGTTCAT	2020	False	NA	NA	False	AATACA	-12	NA	20138480	20134704	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_20134700_20138500
H1_mix_00081973	chr7	-	6187	2	ISM	ENSG00000164651.18	ENST00000361443.4	1714	3	803	-4542	803	2534	3prime_fragment	FALSE	canonical	2	8	junction_1	0	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTACTGATTTTTGCTGCT	5024	False	NA	-1	True	AATAAA	-17	NA	20786083	20779744	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_20785796_20785947
H1_mix_00081975	chr7	-	6916	26	FSM	ENSG00000136237.19	ENST00000665637.1	6916	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	5.49559823859059	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGCTCAGGGGGTTGG	-16	True	NA	55	True	ATTAAA	-20	NA	22357154	22118235	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_22122522_22125603_22125659_22131036_22131102_22136037_22136126_22136932_22136984_22140024_22140116_22145043_22145223_22146896_22147020_22150406_22150505_22154454_22154605_22156809_22156889_22157854_22157886_22160517_22160616_22162396_22162542_22167069_22167149_22193366_22193456_22193914_22194034_22219865_22219992_22230845_22230920_22266963_22267013_22291174_22291242_22308338_22308508_22309968_22310091_22315369_22315477_22317986_22318038_22356829
H1_mix_00081976	chr7	-	2126	5	NNC	ENSG00000105889.16	novel	1004	5	NA	NA	0	8576	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	25.406692031825	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCGACCAGCCATTTCGT	-24	True	NA	-12	True	AATAAA	-18	NA	22500201	22483815	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_22485061_22492564_22492730_22493323_22493837_22494771_22494887_22500113
H1_mix_00081977	chr7	-	1356	2	FSM	ENSG00000179428.2	ENST00000325042.2	1364	2	3	5	3	-5	multi-exon	FALSE	canonical	1	1	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGTTCGTGTTCATGAT	7	True	NA	NA	False	AATAAA	-16	NA	22727617	22725399	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_22726706_22727567
H1_mix_00081978	chr7	-	455	3	FSM	ENSG00000196683.12	ENST00000405021.7	455	3	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_2	2559	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGAGTCTTTTTTGAAT	498	False	NA	-2	True	AATAAA	-18	NA	22822344	22812970	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_22813186_22817999_22818049_22822153
H1_mix_00081981	chr7	-	706	6	FSM	ENSG00000136231.14	ENST00000468263.5	706	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	62.0728604141939	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATGCATAAGGAAGCTCAA	-1	True	NA	NA	False	NA	NA	NA	23467926	23347630	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_23347735_23351304_23351587_23361533_23361598_23361689_23361742_23418775_23418825_23467771
H1_mix_00081982	chr7	-	1770	8	NNC	ENSG00000164548.12	novel	1785	8	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	168.972283683038	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATTGTCTCTTTATTGT	7	True	NA	-4	True	AATAAA	-19	NA	23531972	23504779	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_23505570_23505745_23505811_23506137_23506264_23507419_23507536_23512893_23513083_23516362_23516529_23521706_23521841_23531788
H1_mix_00081983	chr7	-	1778	8	NNC	ENSG00000164548.12	novel	1785	8	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	142.719362129077	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATTGTCTCTTTATTGT	2	True	NA	-4	True	AATAAA	-19	NA	23531977	23504779	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_23505570_23505745_23505814_23506137_23506264_23507419_23507536_23512893_23513083_23516362_23516529_23521706_23521841_23531788
H1_mix_00081984	chr7	-	2186	10	NIC	ENSG00000164548.12	novel	2229	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_9	183.760176504965	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATTGTCTCTTTATTGT	-1	True	NA	-4	True	AATAAA	-19	NA	23531980	23504779	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_23505570_23505745_23505814_23506137_23506267_23507419_23507536_23512893_23513083_23516362_23516529_23521706_23521841_23522120_23522433_23531180_23531271_23531788
H1_mix_00081985	chr7	-	1900	9	FSM	ENSG00000164548.12	ENST00000621813.4	1931	9	35	-4	17	0	multi-exon	FALSE	canonical	1	1	junction_7	175.91719465419	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATTGTCTCTTTATTGT	21	True	NA	-4	True	AATAAA	-19	NA	23532006	23504779	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_23505570_23505745_23505814_23506137_23506267_23507419_23507536_23512893_23513083_23516362_23516529_23521706_23521841_23531180_23531271_23531788
H1_mix_00081986	chr7	-	774	3	FSM	ENSG00000172115.9	ENST00000409409.5	974	3	200	0	200	0	multi-exon	FALSE	canonical	1	1	junction_2	1289.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCAAGATTCACCTGTGT	312	False	NA	NA	False	AATATA	-38	NA	25125049	25123306	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_25123850_25123950_25124128_25124995
H1_mix_00081987	chr7	-	3103	10	FSM	ENSG00000153790.12	ENST00000283905.8	3770	10	0	667	0	-662	multi-exon	FALSE	canonical	2	4	junction_9	3.96590406612772	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTACACATTACAAATTGAA	-23	True	NA	NA	False	AAGAAA	-40	NA	25180354	25135358	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_25136794_25142240_25142333_25142639_25142815_25151595_25151685_25155010_25155193_25158500_25158531_25161188_25161261_25168288_25168466_25179174_25179333_25179661
H1_mix_00081989	chr7	-	4469	12	FSM	ENSG00000122566.22	ENST00000677075.1	4469	12	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_11	3815.96381898055	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAAGACCAGGTTAATT	1631	False	NA	NA	False	AAGAAA	-2	NA	26200142	26189665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190461_26190992_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197462_26197621_26197733_26197830_26197867_26199188
H1_mix_00081990	chr7	-	4172	13	FSM	ENSG00000122566.22	ENST00000678035.1	4172	13	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_12	3679.17363532749	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAAGACCAGGTTAATT	1631	False	NA	NA	False	AAGAAA	-2	NA	26200142	26189665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190461_26190992_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26199188
H1_mix_00081991	chr7	-	4328	12	FSM	ENSG00000122566.22	ENST00000678075.1	4328	12	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_11	3730.90577263719	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAAGACCAGGTTAATT	1631	False	NA	NA	False	AAGAAA	-2	NA	26200142	26189665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190461_26190992_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26199188
H1_mix_00081992	chr7	-	3829	11	FSM	ENSG00000122566.22	ENST00000677571.1	3829	11	0	0	0	0	multi-exon	FALSE	canonical	1	29	junction_2	3496.51210351115	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAAGACCAGGTTAATT	472	False	NA	NA	False	AAGAAA	-2	NA	26201301	26189665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190461_26190992_26192339_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
H1_mix_00081993	chr7	-	4942	9	FSM	ENSG00000122566.22	ENST00000476233.2	4942	9	0	0	0	0	multi-exon	FALSE	canonical	3	691	junction_1	2877.104783893	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAAGACCAGGTTAATT	472	False	NA	NA	False	AAGAAA	-2	NA	26201301	26189665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190461_26190992_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
H1_mix_00081994	chr7	-	4269	10	FSM	ENSG00000122566.22	ENST00000676932.1	4269	10	0	0	0	0	multi-exon	FALSE	canonical	3	691	junction_1	2786.41071835399	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAAGACCAGGTTAATT	472	False	NA	NA	False	AAGAAA	-2	NA	26201301	26189665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190461_26190992_26192578_26193250_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
H1_mix_00081997	chr7	-	3720	13	FSM	ENSG00000122566.22	ENST00000679001.1	3706	13	0	-14	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3524.96470727013	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGCGTTTGAGTACTC	376	False	NA	-16	True	AATAAA	-23	NA	26201397	26189926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190461_26191055_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26200571
H1_mix_00081999	chr7	-	2870	12	FSM	ENSG00000122566.22	ENST00000676497.1	2870	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3537.76863419457	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATAAAATGCTGTTCATT	472	False	NA	-46	True	NA	NA	NA	26201301	26189956	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_26190461_26191055_26191651_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
H1_mix_00082000	chr7	-	1726	12	NIC	ENSG00000122566.22	novel	1724	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	248	junction_2	3374.6374644588	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGGTGTAATGTTTACA	989	False	NA	-7	True	AATAAA	-18	NA	26200784	26190124	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_26190461_26190992_26191129_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
H1_mix_00082002	chr7	-	613	2	Intergenic	novelGene_1353	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATCCAACTTGCATATTT	1920	False	NA	NA	False	NA	NA	NA	27456956	27438249	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_-_27438271_27456364
H1_mix_00082004	chr7	-	5275	8	FSM	ENSG00000136193.17	ENST00000426154.5	5275	8	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_7	153.784370639741	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGAGTGGCCTCTTCTGT	3	True	NA	-1	True	AATAAA	-21	NA	29990118	29920103	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_29924116_29926451_29926633_29936555_29936722_29940681_29940877_29943976_29944180_29955178_29955361_29968908_29969069_29989942
H1_mix_00082005	chr7	-	1179	4	NNC	ENSG00000106080.11	novel	751	2	NA	NA	2	4664	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	44.131117769161	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGTCTGTCATTCTGT	32	True	NA	NA	False	NA	NA	NA	30026634	30005922	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_30006499_30018995_30019124_30022664_30022817_30026311
H1_mix_00082007	chr7	-	796	1	FSM	ENSG00000226468.2	ENST00000435950.1	796	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATGTATTGGTCTGTTT	NA	False	NA	NA	False	NA	NA	NA	32457758	32456962	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_32457000_32457800
H1_mix_00082008	chr7	-	265	2	NNC	ENSG00000229358.3	novel	2594	22	NA	NA	33006	-145401	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGTTTCTTCCAAAAATG	NA	False	NA	NA	False	AATAGA	-30	NA	32728781	32726349	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_32726471_32728637
H1_mix_00082009	chr7	-	3655	5	NNC	ENSG00000170852.12	novel	3608	4	NA	NA	74	2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	65.0091339736194	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTTTTCTTTTGTTATG	-4	True	NA	-22	True	AATAAA	-17	NA	32891686	32868169	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_32870881_32874991_32875158_32879434_32879943_32887976_32888096_32891535
H1_mix_00082011	chr7	-	3076	5	FSM	ENSG00000164610.10	ENST00000474370.2	3057	5	0	-19	0	0	multi-exon	FALSE	canonical	3	213	junction_4	21.1231508066387	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATGTATTTATTTATGA	-1	True	NA	-2	True	AATAAA	-23	NA	33109401	33094796	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_33095433_33096492_33096555_33097270_33099437_33100530_33100562_33109220
H1_mix_00082012	chr7	-	3039	3	FSM	ENSG00000189212.13	ENST00000436258.1	3914	3	164	711	164	-359	multi-exon	FALSE	canonical	2	2	junction_1	2	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTTCCATCCAGTGAGTA	NA	False	NA	NA	False	NA	NA	NA	35107570	35090554	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_35091947_35104643_35104764_35106043
H1_mix_00082013	chr7	-	4132	6	FSM	ENSG00000164542.13	ENST00000338533.9	4132	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	9.04654630231891	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAAGTGTGTGGCTATGT	281	False	NA	-4	True	AATAAA	-24	NA	36366913	36324222	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_36326919_36330981_36331080_36333855_36334162_36335045_36335179_36356901_36357591_36366703
H1_mix_00082014	chr7	-	550	5	FSM	ENSG00000136250.12	ENST00000543742.1	550	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	0.707106781186548	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTATTGTTAGGAATAA	6	True	NA	NA	False	AATACA	-12	NA	36661300	36623189	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_36623251_36632035_36632107_36637850_36637911_36659165_36659266_36661042
H1_mix_00082015	chr7	-	333	1	FSM	ENSG00000178503.6	ENST00000320802.6	830	1	542	-45	542	45	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGAGGGCACCAATCTGT	NA	False	NA	NA	False	AATAAA	-6	NA	37585787	37585454	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_37585500_37585800
H1_mix_00082016	chr7	-	4890	21	NIC	ENSG00000078053.17	novel	3145	20	NA	NA	0	5	combination_of_known_junctions	FALSE	canonical	1	3	junction_7	7.6197112806195	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGAGTCTTTTTTTTT	-22	True	NA	-6	True	AATAAA	-35	NA	38631420	38383698	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_38384926_38389803_38389906_38391747_38392018_38394004_38394215_38422420_38422478_38426953_38426987_38427837_38429578_38429841_38429866_38432188_38432213_38436271_38436389_38461282_38461412_38462974_38463114_38465466_38465550_38466172_38466249_38475330_38475417_38476861_38476970_38491049_38491146_38494432_38494528_38503649_38503705_38534930_38535012_38631282
H1_mix_00082019	chr7	-	954	2	Genic_Genomic	ENSG00000175741.5	novel	563	1	NA	NA	-197	381	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAACAGTCACTCCATAG	NA	False	NA	NA	False	NA	NA	NA	39855253	39854112	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr7_-_39854844_39855030
H1_mix_00082020	chr7	-	1212	3	NNC	ENSG00000168303.9	novel	7627	2	NA	NA	-268	61070	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	462	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCAGCATGGTGGTGCAT	NA	False	NA	NA	False	NA	NA	NA	40134890	40064956	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_40064990_40132742_40133260_40134228
H1_mix_00082021	chr7	-	895	9	NNC	ENSG00000106588.12	novel	1453	9	NA	NA	0	53904	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3558.11135822082	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTAATCCTAGTCTCTGA	23	False	NA	NA	False	AAAAAG	-6	NA	42932154	42862923	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_42862956_42917411_42917691_42917777_42917836_42921857_42921932_42923324_42923407_42924674_42924798_42926535_42926669_42927382_42927460_42932117
H1_mix_00082023	chr7	-	1464	2	FSM	ENSG00000062582.14	ENST00000414932.1	1727	2	0	263	0	-263	multi-exon	FALSE	canonical	3	1259	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTGTAATCCCAGCACT	1	True	NA	NA	False	AATACA	-25	NA	43869507	43867810	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_43869075_43869307
H1_mix_00082024	chr7	-	2195	12	NNC	ENSG00000214783.9	novel	974	9	NA	NA	-5	5446	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_6	145.214233302796	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTCCTTGCTTTCTTTG	9	True	NA	-12	True	AATAAA	-21	NA	44019154	43960893	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_43961746_43961972_43962091_43965866_43965962_43966263_43966396_43972629_43972692_43973209_43973324_43987677_43987889_43988085_43988248_44013592_44013680_44014605_44014784_44016433_44016524_44019060
H1_mix_00082025	chr7	-	793	6	FSM	ENSG00000106631.8	ENST00000458240.5	791	6	0	-2	0	0	multi-exon	FALSE	canonical	3	143	junction_5	13.720058308914	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGTGGTGTCTTGTCTG	257	False	NA	-4	True	AATAAA	-20	NA	44141285	44138863	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44139023_44139520_44139570_44139781_44139861_44140322_44140428_44140711_44140788_44140960
H1_mix_00082026	chr7	-	668	7	NIC	ENSG00000106631.8	novel	612	7	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_5	50.9574986303946	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGTGGTGTCTTGTCTG	223	False	NA	-4	True	AATAAA	-20	NA	44141319	44138863	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_44139023_44139520_44139570_44139781_44139861_44140322_44140428_44140711_44140857_44140960_44141075_44141302
H1_mix_00082028	chr7	-	4946	19	FSM	ENSG00000015520.15	ENST00000381160.8	4982	19	36	0	21	0	multi-exon	FALSE	canonical	1	1	junction_13	2.13437474581095	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTTTATGTCACATGT	-7	True	NA	-31	True	AATAAA	-17	NA	44541294	44512534	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_44513650_44515802_44515966_44516083_44516198_44516702_44516935_44517206_44517358_44520764_44520821_44520991_44521119_44521711_44521837_44522051_44522243_44531754_44531845_44532079_44532218_44533430_44533559_44533738_44533854_44534446_44534630_44535839_44535969_44536255_44536429_44536841_44536943_44538816_44540343_44541205
H1_mix_00082030	chr7	-	630	4	Antisense	novelGene_ENSG00000136280.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_3	18.4028983224563	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGGCTCTGCATGAATT	253	False	NA	-1	True	AATAAA	-21	NA	44999742	44988765	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr7_-_44989018_44992612_44992850_44995028_44995145_44999717
H1_mix_00082032	chr7	-	3131	10	FSM	ENSG00000214765.9	ENST00000689506.1	1599	10	-18	-1514	5	0	multi-exon	FALSE	canonical	3	111	junction_5	18.7023468521407	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTGTGTGTGTGTCTT	NA	False	NA	-2	True	NA	NA	NA	45769009	45726332	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_45728314_45736786_45736911_45744996_45745049_45747214_45747312_45748625_45748715_45751528_45751647_45756908_45756993_45758042_45758178_45759073_45759175_45768659
H1_mix_00082033	chr7	-	4977	4	NIC	ENSG00000132436.12	novel	582	5	NA	NA	-4	82	intron_retention	FALSE	canonical	3	23	junction_1	4.10960933531265	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGCAGTAGGCAGTTTTG	NA	False	NA	69	True	NA	NA	NA	50450394	50444045	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_50447298_50447967_50448056_50448180_50449724_50450300
H1_mix_00082036	chr7	-	4779	16	FSM	ENSG00000106070.20	ENST00000398810.6	4785	16	0	6	0	0	multi-exon	FALSE	canonical	3	72	junction_15	147.020028869841	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCTATTGCTGGTGATA	91	False	NA	-11	True	AATAAA	-20	NA	50705301	50590068	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50705139
H1_mix_00082039	chr7	-	5266	13	NIC	ENSG00000106078.19	novel	5339	14	NA	NA	-46	3	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	17.2183687445188	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGTGAATTTCATACTA	47	False	NA	2	True	AATAAA	-20	NA	51316864	51016208	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_51017569_51026545_51026666_51027711_51029592_51030811_51030910_51043382_51043693_51083057_51083229_51085165_51085305_51136157_51136332_51184101_51184200_51190849_51191079_51193378_51193590_51219740_51219945_51316592
H1_mix_00082041	chr7	-	854	7	Fusion	ENSG00000146733.14_ENSG00000185290.4	novel	1409	7	NA	NA	134	-246	multi-exon	FALSE	non_canonical	0	0	junction_6	169.110089061008	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGGGAGAACTGGAAGAAT	128	False	NA	NA	False	NA	NA	NA	56116283	56011783	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_-_56011870_56015022_56015172_56017233_56017380_56019599_56019735_56021072_56021232_56116014_56116131_56116220
H1_mix_00082042	chr7	-	213	1	FSM	ENSG00000224155.2	ENST00000417282.1	849	1	410	226	410	-226	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTTCAAAAGAACATTGG	NA	False	NA	NA	False	AAGAAA	-43	NA	56305116	56304903	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_56304900_56305100
H1_mix_00082043	chr7	-	253	1	Intergenic	novelGene_1365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTCCAAATGAATAATTG	2918	False	NA	NA	False	NA	NA	NA	64560171	64559918	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_-_64559900_64560200
H1_mix_00082044	chr7	-	741	1	FSM	ENSG00000213642.3	ENST00000409132.2	1010	1	-76	345	-76	-345	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGACCAGCGCCCGCACCG	NA	False	NA	NA	False	NA	NA	NA	64570513	64569772	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_64569800_64570500
H1_mix_00082045	chr7	-	358	2	FSM	ENSG00000213462.5	ENST00000535538.1	358	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAGAGCACCAAGCTATG	0	True	NA	-17	True	ATTAAA	-28	NA	65006659	65006083	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_65006323_65006540
H1_mix_00082046	chr7	-	554	2	FSM	ENSG00000289108.1	ENST00000685608.1	540	2	-14	0	-6	0	multi-exon	FALSE	canonical	3	11	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTGATTGGTGATTAT	-6	True	NA	-3	True	AATACA	-13	NA	65252419	65219562	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_65220000_65252302
H1_mix_00082047	chr7	-	348	1	FSM	ENSG00000231556.1	ENST00000449255.1	495	1	181	-34	181	34	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATATTGGTTTATTTTTTA	NA	False	NA	NA	False	NA	NA	NA	65335487	65335139	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_65335100_65335500
H1_mix_00082048	chr7	-	300	1	FSM	ENSG00000272693.5	ENST00000647241.1	248	1	-26	-26	-26	26	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCCCAGCCATGTTCCGG	-12	False	NA	NA	False	NA	NA	NA	65770746	65770446	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_65770400_65770700
H1_mix_00082050	chr7	-	5619	15	NIC	ENSG00000179406.9	novel	1016	12	NA	NA	32163	-12	combination_of_known_splicesites	FALSE	canonical	2	3	junction_6	8.07869458034211	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGTTTTATTTAATGT	NA	False	NA	-11	True	AATAAA	-23	NA	66455827	66376055	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_66380004_66382236_66382428_66395878_66395957_66399691_66399796_66400321_66400438_66400922_66401028_66402456_66402546_66407289_66407365_66409059_66409245_66411614_66411703_66427948_66428041_66429678_66429758_66429883_66430018_66450070_66450237_66455658
H1_mix_00082052	chr7	-	6907	2	FSM	ENSG00000229180.8	ENST00000449307.3	7092	2	174	11	174	-11	multi-exon	FALSE	canonical	2	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTCTCGCACTTCTGAGT	NA	False	NA	-17	True	AATAAA	-5	NA	66542375	66526098	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_66531872_66541241
H1_mix_00082053	chr7	-	1726	4	NIC	ENSG00000229180.8	novel	2103	6	NA	NA	-5	-80	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	40.49965706302	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATGGATTTCATTTATT	-20	True	NA	0	True	TATAAA	-26	NA	66592368	66553564	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_66554838_66573384_66573551_66576754_66576930_66592256
H1_mix_00082055	chr7	-	471	2	Genic_Genomic	ENSG00000272831.1	novel	557	1	NA	NA	-1	9277	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACCAAGTGCTATATGTG	227	False	NA	NA	False	AAAAAG	-6	NA	66740386	66730551	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr7_-_66730569_66739932
H1_mix_00082056	chr7	-	204	1	FSM	ENSG00000271064.1	ENST00000603786.1	240	1	164	-128	164	128	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTGCTTCAGGACTGCAA	NA	False	NA	NA	False	TATAAA	-38	NA	66748913	66748709	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_66748700_66748900
H1_mix_00082057	chr7	-	2263	2	FSM	ENSG00000234215.3	ENST00000669908.1	1901	2	-573	211	-573	-211	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCAGGATAGTGGTTAC	NA	False	NA	NA	False	NA	NA	NA	69598066	69595003	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_69596434_69597233
H1_mix_00082058	chr7	-	2125	8	NIC	ENSG00000106133.18	novel	1385	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	89	junction_2	164.184565135007	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGCTCCGGGCTCACTC	24	False	NA	NA	False	AAAAAG	-36	NA	72954706	72948484	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_72948809_72948891_72949103_72949312_72949492_72949845_72949962_72950057_72950197_72953325_72953431_72953510_72954480_72954624
H1_mix_00082059	chr7	-	1041	8	NIC	ENSG00000106133.18	novel	1385	10	NA	NA	3	-65	intron_retention	FALSE	canonical	3	40	junction_6	186.366656385323	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCCCCAAAGAGAAAGAAGA	20	False	NA	NA	False	NA	NA	NA	72954710	72948549	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_72948598_72948667_72948809_72948891_72949103_72949312_72949492_72949845_72949962_72950057_72950197_72954358_72954480_72954624
H1_mix_00082060	chr7	-	1423	11	NNC	ENSG00000106133.18	novel	1647	12	NA	NA	4	-169	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_9	166.461076531422	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGCTTGGGAGGCGCAGG	28	False	NA	NA	False	NA	NA	NA	72954702	72948653	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_72948809_72948891_72948981_72949102_72949233_72949312_72949492_72949845_72949962_72950057_72950197_72952151_72952296_72953325_72953431_72953510_72953678_72954358_72954480_72954624
H1_mix_00082062	chr7	-	4278	7	NIC	ENSG00000106133.18	novel	1789	11	NA	NA	1	-169	intron_retention	FALSE	canonical	3	111	junction_4	150.887099073004	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGCTTGGGAGGCGCAGG	11	False	NA	NA	False	NA	NA	NA	72954719	72948653	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_72948809_72948891_72949492_72949845_72949962_72950057_72952296_72953325_72953431_72953510_72954480_72954624
H1_mix_00082063	chr7	-	4152	8	NNC	ENSG00000106133.18	novel	1647	12	NA	NA	1	-169	intron_retention	FALSE	canonical	3	40	junction_3	175.151945697536	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGCTTGGGAGGCGCAGG	11	False	NA	NA	False	NA	NA	NA	72954719	72948653	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_72948809_72948891_72948981_72949102_72949488_72949845_72949962_72950057_72952296_72953325_72953431_72953510_72954480_72954624
H1_mix_00082064	chr7	-	5428	19	FSM	ENSG00000009954.11	ENST00000404251.1	5428	19	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_17	4.61746550115114	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGACAGCTCCTCCCACC	15	False	NA	NA	False	AGTAAA	-39	NA	73522278	73441564	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_73442554_73442724_73442829_73443983_73444130_73447263_73447380_73449541_73449690_73450846_73450995_73459535_73459719_73462921_73463100_73465438_73465538_73466295_73466402_73469516_73469651_73470344_73470484_73476867_73478570_73489193_73489392_73492799_73492922_73498496_73498699_73508326_73508472_73510735_73510853_73521826
H1_mix_00082065	chr7	-	1582	3	FSM	ENSG00000106635.8	ENST00000493671.5	1802	3	219	1	219	-1	multi-exon	FALSE	canonical	3	319	junction_2	21.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGTTGGTATCTGAGTG	NA	False	NA	-10	True	ATTAAA	-14	NA	73540349	73536356	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_73537391_73537933_73538014_73539881
H1_mix_00082072	chr7	-	2241	1	FSM	ENSG00000274080.1	ENST00000619486.1	2241	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73611502	73609261	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_73609300_73611500
H1_mix_00082073	chr7	-	1282	6	NNC	ENSG00000106077.19	novel	1418	6	NA	NA	0	61965	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	133.468498155932	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGTGCGGTGGCTCACG	390	False	NA	NA	False	NA	NA	NA	73738463	73674128	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_73674155_73736098_73736692_73736928_73737111_73737220_73737392_73737561_73737736_73738327
H1_mix_00082077	chr7	-	1720	8	NIC	ENSG00000277072.5	novel	1017	10	NA	NA	8	82	intron_retention	FALSE	canonical	3	24	junction_4	27.0524811190005	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGGTGCGATCTCAGCC	16	False	NA	57	True	NA	NA	NA	74890549	74882080	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_74883042_74883348_74883464_74883727_74883836_74884143_74884224_74884433_74884525_74887682_74887800_74888311_74888398_74890387
H1_mix_00082078	chr7	-	3239	24	NNC	ENSG00000277053.4	novel	3605	24	NA	NA	0	52836	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	693.089835337939	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGAAGGAGAGGAGGATG	NA	False	NA	NA	False	NA	NA	NA	75217264	75132548	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_75132574_75185382_75186528_75187219_75187296_75188074_75188117_75189214_75189257_75190538_75190568_75192046_75192231_75192898_75192981_75193902_75193984_75194656_75194713_75196612_75196797_75196973_75197040_75197947_75198050_75199650_75199726_75200120_75200180_75201120_75201305_75202541_75202614_75207955_75208015_75209375_75209560_75210527_75210600_75212078_75212138_75213405_75213590_75215755_75215822_75217153
H1_mix_00082079	chr7	-	5946	16	NNC	ENSG00000272391.6	novel	5867	15	NA	NA	43	0	at_least_one_novel_splicesite	TRUE	canonical	2	6	junction_15	56.7784779256679	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTACGTTCTGCATTTTAT	41	False	NA	NA	False	AATAAA	-19	NA	75486256	75416785	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_75418894_75419319_75419443_75421508_75423204_75424048_75424226_75424525_75424629_75425073_75425196_75425634_75425709_75426361_75426454_75437514_75437687_75439143_75439225_75440953_75441116_75441431_75441648_75474703_75474883_75475061_75475189_75484197_75484320_75485863
H1_mix_00082080	chr7	-	757	6	FSM	ENSG00000127957.19	ENST00000529061.7	772	6	15	0	15	0	multi-exon	TRUE	canonical	2	5	junction_4	10.3460137251021	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAGTAAATTAATCTTGG	NA	False	NA	NA	False	NA	NA	NA	75516220	75510930	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_75511115_75512308_75512422_75512588_75512676_75514644_75514780_75515717_75515829_75516093
H1_mix_00082081	chr7	-	1185	7	FSM	ENSG00000127957.19	ENST00000437568.6	1185	7	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_3	12.979684981625	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCCAGAGGGACCACAGTC	10	True	NA	NA	False	NA	NA	NA	75528088	75511016	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_75511115_75512588_75512676_75514644_75514780_75515717_75515829_75516093_75516221_75525904_75526008_75527564
H1_mix_00082082	chr7	-	1226	8	NIC	ENSG00000127952.17	novel	1411	9	NA	NA	25	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_7	89.4027803977994	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGCCTCCTGTACTGAT	1071	False	NA	-5	True	NA	NA	NA	76047928	75996341	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_75996600_76003757_76003856_76005258_76005405_76013741_76013888_76021850_76021993_76028641_76028704_76030420_76030528_76047661
H1_mix_00082084	chr7	-	1084	8	NIC	ENSG00000127952.17	novel	1415	9	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_1	61.7483371667379	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGCCTCCTGTACTGAT	37	True	NA	-5	True	NA	NA	NA	76047939	75996341	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_75996600_76003757_76003856_76005258_76005405_76013741_76013888_76021850_76021993_76028641_76028704_76030420_76030525_76047811
H1_mix_00082085	chr7	-	819	7	NNC	ENSG00000127952.17	novel	1147	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	90.4957027831831	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGGCCAGAGTGTGTATA	1844	False	NA	-72	True	NA	NA	NA	76028671	75996408	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_75996600_76000889_76000955_76003756_76003856_76005258_76005405_76013741_76013888_76021850_76021993_76028641
H1_mix_00082086	chr7	-	2257	8	NIC	ENSG00000146700.9	novel	2800	11	NA	NA	11	6	combination_of_known_splicesites	FALSE	canonical	2	12	junction_7	26.4544275064473	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTGTTTGAGCACAAATG	20	True	NA	-4	True	AATAAA	-30	NA	76409686	76389327	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_76390376_76391963_76392042_76393404_76393717_76393829_76393905_76395252_76395331_76397517_76397833_76398719_76398798_76409413
H1_mix_00082087	chr7	-	1236	3	ISM	ENSG00000146707.15	ENST00000424818.5	1587	8	21	15169	0	-13475	5prime_fragment	FALSE	canonical	3	56	junction_1	5.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGGTGTTCAGTTATT	38	False	NA	NA	False	AAGAAA	-27	NA	76627240	76625196	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_76625684_76625999_76626216_76626707
H1_mix_00082088	chr7	-	485	1	FSM	ENSG00000214243.3	ENST00000423648.1	497	1	15	-3	15	3	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTTAGTAGAGTATCAA	NA	False	NA	NA	False	NA	NA	NA	76650882	76650397	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_76650400_76650900
H1_mix_00082089	chr7	-	1551	1	FSM	ENSG00000231087.2	ENST00000429043.1	1054	1	46	-543	46	543	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGTGGTGGCGAGCGCC	NA	False	NA	NA	False	AATACA	-11	NA	76969204	76967653	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_76967700_76969200
H1_mix_00082091	chr7	-	498	5	FSM	ENSG00000186088.16	ENST00000474686.5	825	5	327	0	327	0	multi-exon	FALSE	canonical	1	2	junction_1	2.27760839478607	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGCCATTTTAATCTTG	NA	False	NA	NA	False	AAAAAG	-19	NA	77314488	77311334	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_77311450_77311840_77311941_77312100_77312203_77313487_77313550_77314369
H1_mix_00082093	chr7	-	5894	20	NIC	ENSG00000187391.22	novel	6704	21	NA	NA	0	-428	intron_retention	FALSE	canonical	0	0	junction_5	21.1323490716323	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCCATTAATTTATTGAAT	5	True	NA	NA	False	NA	NA	NA	78771122	78017519	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_78019977_78078946_78079086_78125693_78125838_78127196_78127417_78132888_78133061_78160024_78160274_78167915_78168109_78178010_78178103_78194873_78195064_78201161_78201194_78255942_78256582_78343777_78343961_78345921_78346044_78369155_78369214_78489760_78489841_78501576_78501788_78521429_78521646_78554566_78554672_78627119_78627240_78770850
H1_mix_00082095	chr7	-	1043	4	NNC	ENSG00000153956.16	novel	7542	39	NA	NA	-8	-182685	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	31.6262900483478	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGATAGTGAAGTGAAGAC	401	False	NA	NA	False	AATAAA	-17	NA	82443785	82299728	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_82300152_82335134_82335252_82349567_82349650_82443364
H1_mix_00082096	chr7	-	1624	1	FSM	ENSG00000285398.1	ENST00000644734.1	445	1	-1102	-77	-1102	77	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTTTCTGATTTTTTT	NA	False	NA	73	True	AATACA	-13	NA	83374198	83372574	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_83372600_83374200
H1_mix_00082097	chr7	-	1535	10	FSM	ENSG00000153993.14	ENST00000444867.1	1605	10	0	70	0	-70	multi-exon	FALSE	canonical	0	0	junction_1	6.14837125878085	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTCCAATAAATTGTTT	-16	True	NA	NA	False	NA	NA	NA	85186855	85050426	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_85050751_85055716_85055860_85065423_85065553_85068190_85068285_85072961_85073082_85081516_85081580_85097804_85097966_85121740_85121932_85153607_85153740_85186677
H1_mix_00082098	chr7	-	5691	22	NNC	ENSG00000164659.15	novel	6796	22	NA	NA	19278	-910	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_21	42.7045431369444	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTGTAGATGTCTGTC	NA	False	NA	-4	True	ATTAAA	-15	NA	87040237	86877815	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_86880531_86891723_86891890_86892921_86893101_86897505_86897633_86907669_86907772_86908446_86908544_86909811_86910002_86912071_86912246_86912940_86913205_86914722_86914861_86918441_86918545_86919219_86919311_86925527_86925657_86926735_86926917_86938125_86938215_86938807_86938961_86940009_86940116_86942017_86942105_86944898_86945047_86947726_86947923_86964903_86965025_87040102
H1_mix_00082099	chr7	-	938	5	NIC	ENSG00000135185.12	novel	1273	5	NA	NA	0	-41	combination_of_known_junctions	FALSE	canonical	3	39	junction_4	200.635864191824	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGAGGCTGCCAAGGAGAA	-7	True	NA	NA	False	NA	NA	NA	87220587	87196640	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_87196759_87197940_87198046_87199006_87199058_87219425_87219719_87220216
H1_mix_00082101	chr7	-	1057	4	FSM	ENSG00000182165.19	ENST00000359941.11	1144	4	87	0	14	0	multi-exon	FALSE	canonical	1	2	junction_1	34.4125300177453	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTAATGATCTTCAGGT	55	False	NA	NA	False	NA	NA	NA	87345447	87325114	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_87325445_87329934_87330095_87341522_87341685_87345042
H1_mix_00082102	chr7	-	5135	28	FSM	ENSG00000085563.15	ENST00000622132.5	5205	28	14	56	14	-56	multi-exon	FALSE	canonical	0	0	junction_7	1.40056817786585	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCATTTTTTTGCCTTGTA	2258	False	NA	NA	False	AATAAA	-18	NA	87600870	87503072	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_87504450_87505896_87506044_87509274_87509482_87515230_87515429_87516508_87516666_87519325_87519467_87520775_87520877_87531293_87531498_87536457_87536542_87539267_87539346_87541356_87541465_87544128_87544276_87544822_87545000_87545862_87546025_87549347_87549519_87549850_87550055_87550170_87550297_87550467_87550579_87550724_87550839_87553760_87553933_87561262_87561388_87566069_87566242_87566784_87566977_87570171_87570224_87585511_87585681_87595765_87595815_87600116_87600191_87600754
H1_mix_00082103	chr7	-	599	4	FSM	ENSG00000075142.14	ENST00000488015.5	588	4	0	-11	0	11	multi-exon	FALSE	canonical	3	2456	junction_1	132.093401298728	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTATCCAGTGCATTCCA	14	True	NA	NA	False	NA	NA	NA	88220038	88210543	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_88210926_88217121_88217192_88218858_88218943_88219975
H1_mix_00082105	chr7	-	418	4	NNC	ENSG00000127989.14	novel	380	5	NA	NA	0	69917	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	51.1620519091597	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCACCTTGCTCACCCTCC	10	True	NA	-20	True	AATAAA	-7	NA	91880692	91801011	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_91801269_91827414_91827481_91880054_91880114_91880656
H1_mix_00082106	chr7	-	3894	18	NIC	ENSG00000001631.17	novel	4079	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_17	28.5039911003796	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCAGAGATATAGTCATAT	-8	True	NA	NA	False	AATAAA	-19	NA	92245914	92199412	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_92200805_92201306_92201424_92213194_92213402_92213891_92213980_92214610_92214778_92221901_92222054_92222821_92222979_92225719_92225828_92226525_92226683_92234448_92234593_92234807_92234924_92235402_92235647_92236412_92236543_92237666_92237760_92240992_92241153_92242033_92242138_92244901_92245135_92245789
H1_mix_00082107	chr7	-	855	7	ISM	ENSG00000001631.17	ENST00000690529.1	3829	18	0	36159	0	665	5prime_fragment	FALSE	canonical	0	0	junction_5	45.5216676124922	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGATAAAAACTAATGTCATA	-14	True	NA	NA	False	NA	NA	NA	92245920	92235578	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_92235647_92236412_92236543_92237666_92237760_92240992_92241153_92242033_92242138_92245426_92245596_92245789
H1_mix_00082109	chr7	-	2926	1	FSM	ENSG00000242950.7	ENST00000493463.2	2925	1	0	-1	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTCTGGTCCATGTTTCT	6641	False	NA	-3	True	ATTAAA	-14	NA	92471305	92468379	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_92468400_92471300
H1_mix_00082111	chr7	-	1966	7	NNC	ENSG00000234545.8	novel	2367	11	NA	NA	0	6360	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	271.094950565705	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATATAGTGTAATCCTTTT	9246	False	NA	NA	False	NA	NA	NA	92577717	92554397	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_92554447_92560799_92562369_92566013_92566062_92569822_92569916_92575770_92575822_92577102_92577196_92577654
H1_mix_00082114	chr7	-	3991	15	NNC	ENSG00000004948.16	novel	3829	15	NA	NA	-67970	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_7	12.7865123454046	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTATATTTGCATATTTT	NA	False	NA	-2	True	TATAAA	-29	NA	93642700	93424538	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_93426590_93434252_93434295_93435951_93436171_93438059_93438127_93438209_93438271_93443603_93443758_93460820_93460948_93462062_93462111_93468714_93468807_93472374_93472488_93477557_93477669_93479353_93479508_93486930_93487008_93574288_93574507_93642243
H1_mix_00082115	chr7	-	340	2	Genic_Genomic	ENSG00000237729.2	novel	252	1	NA	NA	0	13041	multi-exon	FALSE	non_canonical	0	0	junction_1	0	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTAGCCAAGTGTGGT	33	False	NA	NA	False	NA	NA	NA	93670077	93656784	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr7_-_93656808_93669760
H1_mix_00082116	chr7	-	781	4	FSM	ENSG00000105825.14	ENST00000451238.1	781	4	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_2	21.9241115365405	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATTTTGCATTTAAAAGT	-4	True	NA	NA	False	AATAAA	-19	NA	93890170	93886433	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_93886897_93887260_93887356_93889034_93889224_93890136
H1_mix_00082119	chr7	-	1740	13	FSM	ENSG00000127990.19	ENST00000644122.1	1779	13	39	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	99.9970485675563	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTGATGACTTTATATT	10	True	NA	-85	True	NA	NA	NA	94656166	94585293	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_94585516_94587777_94587850_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94622545_94622627_94623324_94623398_94628201_94628360_94629718_94629842_94655989
H1_mix_00082120	chr7	-	1493	12	FSM	ENSG00000127990.19	ENST00000646119.1	1493	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	83.8407581506318	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAATAATACAACATAACTT	9568	False	NA	NA	False	NA	NA	NA	94656072	94585365	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_94585516_94587777_94587850_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94629718_94629842_94655989
H1_mix_00082121	chr7	-	1284	10	FSM	ENSG00000127990.19	ENST00000647048.1	1284	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	105.101009615618	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATGCATGTTGGCAGTA	9595	False	NA	NA	False	NA	NA	NA	94656045	94585397	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_94585516_94587777_94587850_94588688_94588733_94598774_94598964_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94655989
H1_mix_00082122	chr7	-	680	1	FSM	ENSG00000232385.2	ENST00000411660.1	793	1	167	-54	167	54	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAGAAAGAA	184	False	NA	NA	False	AATAAA	-24	NA	94695652	94694972	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_94695000_94695700
H1_mix_00082124	chr7	-	2775	2	FSM	ENSG00000127922.10	ENST00000482389.1	2773	2	0	-2	0	2	multi-exon	FALSE	canonical	3	7433	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTTTGGTTCAGAAGT	7985	False	NA	-23	True	AATAAA	-14	NA	96697372	96688766	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_96688967_96694797
H1_mix_00082125	chr7	-	1865	12	FSM	ENSG00000070669.17	ENST00000422745.5	1865	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	184.275978802546	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTCCTAAATCTAAACC	-16	True	NA	-32	True	NA	NA	NA	97872467	97852145	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_97852469_97853059_97853216_97853304_97853387_97854579_97854681_97855352_97855460_97856689_97856817_97858277_97858406_97858853_97858956_97859212_97859399_97864258_97864497_97868907_97869106_97872350
H1_mix_00082126	chr7	-	218	1	FSM	ENSG00000237818.1	ENST00000437728.1	769	1	353	198	353	-198	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAAAAGATATAGAAAAGG	NA	False	NA	NA	False	AATAAA	-18	NA	97898762	97898544	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_97898500_97898800
H1_mix_00082128	chr7	-	1492	6	Fusion	ENSG00000243554.1_ENSG00000284627.1_ENSG00000284707.2	novel	1088	2	NA	NA	-40	5324	intron_retention	FALSE	canonical	3	19	junction_3	52.9694251431899	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTTTGTAAAAAGAATGT	-9	True	NA	NA	False	AATAAA	-41	NA	97972339	97922757	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_-_97923084_97928081_97928778_97937079_97937161_97945507_97945616_97969769_97969846_97972134
H1_mix_00082129	chr7	-	441	4	FSM	ENSG00000205356.10	ENST00000479911.5	567	4	0	126	0	-126	multi-exon	FALSE	canonical	2	2	junction_1	15.1730755689881	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAAGCCCGCCTCAGCCTC	NA	False	NA	NA	False	NA	NA	NA	98231118	98226717	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_98226770_98228013_98228117_98229038_98229167_98230960
H1_mix_00082130	chr7	-	883	2	Genic_Genomic	ENSG00000214389.2	novel	784	1	NA	NA	-24	16137	multi-exon	FALSE	non_canonical	0	0	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGGAAATCAAATGAGACT	1	True	NA	NA	False	NA	NA	NA	98386608	98369663	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr7_-_98369691_98385752
H1_mix_00082133	chr7	-	486	5	NNC	ENSG00000241468.8	novel	443	4	NA	NA	0	1710	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2727.31044254225	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGGTGTACACCTGTAG	6	True	NA	NA	False	AAAAAG	-7	NA	99466161	99446764	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_99446809_99458189_99458356_99459146_99459264_99460085_99460194_99466110
H1_mix_00082135	chr7	-	2774	6	NNC	ENSG00000166526.18	novel	2797	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	80.2705425420808	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATAGTTTTTCAGAAGAG	0	True	NA	-21	True	ATTAAA	-2	NA	100081723	100069991	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_100072213_100075134_100075262_100075541_100075631_100077302_100077434_100079539_100079657_100081634
H1_mix_00082136	chr7	-	2541	16	FSM	ENSG00000106290.16	ENST00000692927.1	2764	16	29	194	-1	0	multi-exon	FALSE	canonical	3	101	junction_15	319.056289007999	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTGCAGTCCTTCCTGC	5	True	NA	-2	True	AATAAA	-22	NA	100119343	100107069	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100107624_100107925_100108124_100108366_100108541_100109947_100110074_100110199_100110275_100111138_100111322_100111727_100111830_100111921_100112000_100112107_100112254_100112797_100112918_100113348_100113406_100113615_100113770_100113867_100113955_100114053_100114269_100118517_100118650_100119203
H1_mix_00082138	chr7	-	2236	5	FSM	ENSG00000078319.11	ENST00000676200.2	2335	5	99	0	-1	0	multi-exon	FALSE	canonical	1	5	junction_1	112.690671752368	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAAAAATACGCCAGACG	78	False	NA	NA	False	ATTAAA	-3	NA	100335880	100319221	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100321085_100330181_100330285_100330462_100330550_100332441_100332582_100335837
H1_mix_00082141	chr7	-	497	3	NIC	ENSG00000160813.7	novel	963	4	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	94	junction_1	193	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGACTCTTCTTGGAGGCC	524	False	NA	-23	True	AATAAA	-18	NA	100436168	100435281	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_100435534_100435847_100436065_100436140
H1_mix_00082142	chr7	-	651	2	NIC	ENSG00000160813.7	novel	965	3	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	652	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAAAGATCCCTGGAGGG	603	False	NA	-40	True	NA	NA	NA	100436089	100435358	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_100435768_100435847
H1_mix_00082143	chr7	-	758	3	FSM	ENSG00000185955.5	ENST00000332375.4	988	3	231	-1	-156	1	multi-exon	FALSE	canonical	1	1	junction_2	2	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTATGGAGTGTGTTTGT	4041	False	NA	-4	True	AATAAA	-18	NA	100464029	100456618	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100456986_100463362_100463687_100463962
H1_mix_00082145	chr7	-	2573	17	NNC	ENSG00000106327.13	novel	2886	18	NA	NA	415	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	7.3229092579384	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGTTGACATCTGTTAT	5450	False	NA	NA	False	AATAAA	-20	NA	100641099	100620417	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_100621127_100626762_100626904_100627263_100627492_100627576_100627662_100627743_100627821_100627906_100627975_100628072_100628137_100628223_100628307_100629252_100629373_100630888_100631053_100631805_100631946_100632081_100632199_100633000_100633124_100633228_100633341_100633415_100633557_100640685_100640763_100640975
H1_mix_00082146	chr7	-	693	6	NNC	ENSG00000077080.10	novel	1524	14	NA	NA	447	-2	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	12.4096736459909	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTGGCCTCCGTGGGGT	9121	False	NA	NA	False	AGTAAA	-18	NA	100647291	100643098	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_100643327_100646248_100646353_100646550_100646647_100646750_100646832_100646970_100647086_100647222
H1_mix_00082147	chr7	-	4080	11	NIC	ENSG00000146830.11	novel	6530	24	NA	NA	0	13	intron_retention	FALSE	canonical	3	52	junction_5	12.8487353463288	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCGTTATCTGGGGAGAG	9858	False	NA	5	True	AATAAA	-33	NA	100684591	100679493	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_100681772_100681863_100681994_100682071_100682236_100682321_100682483_100682589_100683231_100683303_100683445_100683549_100683633_100683817_100683919_100684019_100684158_100684236_100684338_100684449
H1_mix_00082148	chr7	-	2923	5	FSM	ENSG00000087085.16	ENST00000411582.4	2928	5	5	0	3	0	multi-exon	FALSE	canonical	2	5	junction_4	7.15454401062709	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGAGTGTGCGCGACTAGG	3	True	NA	-4	True	AATAAA	-13	NA	100895883	100889993	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_100891089_100891168_100891339_100892333_100892819_100893164_100894256_100895801
H1_mix_00082150	chr7	-	3620	10	Fusion	ENSG00000214253.9_ENSG00000106404.14	novel	2131	6	NA	NA	0	1	multi-exon	FALSE	canonical	2	6	junction_3	285.16276487146	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTGAAGGTGTCAGAAGC	7251	False	NA	0	True	AATAAA	-21	NA	101245048	101232090	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr7_-_101232516_101232603_101232721_101232832_101232915_101234277_101234443_101237364_101237825_101237937_101239904_101240141_101240248_101240829_101240907_101244006_101244140_101244959
H1_mix_00082152	chr7	-	659	1	FSM	ENSG00000207454.1	ENST00000384723.1	104	1	-558	3	-558	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTATAGTCCGCTGCCC	NA	False	NA	NA	False	NA	NA	NA	101270599	101269940	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_101269900_101270600
H1_mix_00082153	chr7	-	2725	20	FSM	ENSG00000170667.15	ENST00000541662.5	2794	20	69	0	47	0	multi-exon	FALSE	canonical	2	2	junction_16	22.8911672958415	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGGTCTTGTGATGAGG	70	False	NA	NA	False	AGTAAA	-21	NA	102517708	102483138	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_102483714_102483824_102483890_102485038_102485160_102488462_102488599_102493115_102493286_102493824_102493970_102494537_102494676_102494880_102495074_102495277_102495391_102496139_102496205_102496468_102496620_102496846_102496965_102500698_102500794_102501095_102501228_102503162_102503245_102506694_102506825_102509598_102509661_102510178_102510293_102511924_102511982_102517645
H1_mix_00082154	chr7	-	2514	12	ISM	ENSG00000170667.15	ENST00000306682.6	2589	21	20630	-421	-2257	-2	intron_retention	FALSE	canonical	3	17	junction_10	21.6226083089586	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGGGTCTTGTGATGA	NA	False	NA	NA	False	AGTAAA	-19	NA	102497125	102483140	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_102483714_102483824_102483890_102485038_102485160_102488462_102488599_102490985_102491124_102493115_102493286_102493824_102493970_102494537_102494676_102494880_102495074_102495277_102495391_102496139_102496205_102496468
H1_mix_00082155	chr7	-	1984	12	NIC	ENSG00000168255.20	novel	1598	9	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	1	4	junction_8	607.323650559507	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTCCGTGACATCATAC	20	False	NA	-18	True	AATAAA	-19	NA	102572560	102537915	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_102538526_102539605_102539727_102540014_102540092_102541092_102541304_102541500_102541663_102543524_102543698_102544705_102544777_102545302_102545421_102566996_102567084_102568009_102568185_102569834_102569925_102572471
H1_mix_00082156	chr7	-	1132	6	ISM	ENSG00000168255.20	ENST00000503564.5	875	7	21548	0	21548	0	3prime_fragment	FALSE	canonical	3	45	junction_5	156.223429740868	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCTTCTGGACCCTGAG	222	False	NA	NA	False	NA	NA	NA	102545081	102538340	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_102538526_102539605_102539727_102540014_102540092_102541092_102541304_102541500_102541663_102544705
H1_mix_00082157	chr7	-	743	7	NIC	ENSG00000168255.20	novel	1598	9	NA	NA	-2	-76	combination_of_known_splicesites	FALSE	canonical	3	14	junction_3	741.248421396108	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTTCCAGAGGGGCCCAC	-4	True	NA	NA	False	GGGGCT	-7	NA	102572555	102538416	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_102538526_102539605_102539727_102540014_102540092_102566996_102567084_102568009_102568185_102569834_102569925_102572471
H1_mix_00082159	chr7	-	5604	21	FSM	ENSG00000105808.19	ENST00000262940.12	5604	21	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_20	19.6606205395455	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGCCTGGTCCTACCAGA	-3	True	NA	NA	False	AATAAA	-18	NA	102616756	102579645	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_102582893_102583003_102583069_102584217_102584339_102587634_102587771_102590158_102590297_102592284_102592455_102592993_102593139_102593706_102593845_102594049_102594243_102594446_102594560_102595304_102595370_102595633_102595785_102596011_102596130_102599859_102599955_102600256_102600389_102602323_102602406_102605857_102605988_102608760_102608823_102609340_102609455_102611085_102611143_102616624
H1_mix_00082160	chr7	-	1215	7	NIC	ENSG00000267645.5	novel	1598	9	NA	NA	21	24	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	176.706363464616	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTGTCCGTGACATCA	117	False	NA	-7	True	AATAAA	-16	NA	102671620	102637024	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_102637634_102638713_102638835_102639122_102639200_102640611_102640774_102666076_102666164_102668914_102669005_102671551
H1_mix_00082161	chr7	-	1602	9	NNC	ENSG00000267645.5	novel	1598	9	NA	NA	0	24	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_5	177.589942001229	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTGTCCGTGACATCA	96	False	NA	-7	True	AATAAA	-16	NA	102671641	102637024	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_102637634_102638713_102638835_102639122_102639200_102640203_102640415_102640611_102640774_102665661_102665817_102666076_102666164_102668914_102669005_102671551
H1_mix_00082162	chr7	-	1737	10	NNC	ENSG00000267645.5	novel	1598	9	NA	NA	10	-6	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_5	337.139931383592	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATCGGAAATAAATGCCC	0	True	NA	-37	True	NA	NA	NA	102671631	102637054	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_102637634_102638713_102638835_102639122_102639200_102640203_102640415_102640611_102640774_102665661_102665817_102666076_102666164_102667089_102667265_102668914_102669005_102671551
H1_mix_00082165	chr7	-	804	1	FSM	ENSG00000239569.4	ENST00000692300.1	804	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGCGATTCCGGCTCTTG	-9	True	NA	NA	False	AATAAA	-25	NA	105014086	105013282	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_105013300_105014100
H1_mix_00082166	chr7	-	736	2	FSM	ENSG00000239569.4	ENST00000453677.1	736	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCACCGGTGGGACAATGT	NA	False	NA	NA	False	NA	NA	NA	105014321	105013424	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_105013980_105014140
H1_mix_00082168	chr7	-	3469	17	NNC	ENSG00000091127.14	novel	3480	16	NA	NA	0	33947	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	114.149572929556	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGGGCGCGGTGGCTCAC	9822	False	105522271	NA	False	NA	NA	NA	105522258	105405713	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_105405745_105456552_105457927_105459167_105459260_105462620_105462751_105465312_105465415_105468336_105468464_105470687_105470849_105472131_105472194_105481051_105481178_105482311_105482441_105491539_105491618_105495141_105495254_105502419_105502565_105505954_105506057_105506188_105506274_105508114_105508521_105522051
H1_mix_00082169	chr7	-	3492	17	NNC	ENSG00000091127.14	novel	3525	16	NA	NA	0	33947	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	95.7130313750432	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGGGCGCGGTGGCTCAC	9822	False	105522271	NA	False	NA	NA	NA	105522258	105405713	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_105405745_105456553_105457927_105459167_105459260_105462620_105462751_105465312_105465415_105468336_105468464_105470687_105470849_105472131_105472194_105481051_105481178_105482311_105482441_105491539_105491618_105495141_105495254_105502419_105502565_105505954_105506057_105506188_105506274_105508114_105508545_105522051
H1_mix_00082171	chr7	-	5230	6	ISM	ENSG00000146776.15	ENST00000477775.5	2426	10	40047	-2999	-14849	0	3prime_fragment	FALSE	canonical	3	30	junction_2	27.6940426806922	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTGCACCTGCTCATTT	3298	False	NA	-7	True	ATTAAA	-22	NA	105639115	105604771	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_105607894_105610528_105610604_105613861_105614817_105620199_105620322_105624074_105624268_105638352
H1_mix_00082172	chr7	-	4535	6	NNC	ENSG00000146776.15	novel	5707	12	NA	NA	-14935	-502	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	38.3437087408091	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGTTAAACTGGAGCAGC	3212	False	NA	NA	False	AATAAA	-25	NA	105639201	105605273	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_105607891_105610528_105610604_105614137_105614817_105620199_105620322_105624074_105624268_105638352
H1_mix_00082173	chr7	-	2779	10	ISM	ENSG00000146776.15	ENST00000419735.8	5707	12	122	8702	0	0	5prime_fragment	FALSE	canonical	3	26	junction_7	24.0174833438651	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTTTGATCTGATCTGTT	903	False	NA	-1	True	ATTAAA	-16	NA	105876477	105613473	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_105614817_105620199_105620322_105624074_105624268_105638352_105638610_105639486_105639570_105642837_105643122_105665065_105665289_105788603_105788709_105875811_105875881_105876377
H1_mix_00082174	chr7	-	1057	3	ISM	ENSG00000146776.15	ENST00000474433.5	2732	9	39026	6624	-14726	135	internal_fragment	FALSE	canonical	3	82	junction_1	10.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGATTCTGAAGTCAGGA	3421	False	NA	NA	False	AATAAA	-28	NA	105638992	105620097	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr7_-_105620322_105624074_105624268_105638352
H1_mix_00082175	chr7	-	4490	12	FSM	ENSG00000105835.13	ENST00000681491.1	4477	12	0	-13	0	13	multi-exon	FALSE	canonical	0	0	junction_11	189.378147220391	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTGCTTCAAGTAATG	475	False	NA	0	True	AATAAA	-40	NA	106285436	106248284	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_106251194_106253016_106253152_106254363_106254505_106261587_106261708_106263391_106263618_106268463_106268601_106269153_106269313_106272529_106272659_106274945_106275050_106277022_106277180_106284827_106284982_106285317
H1_mix_00082176	chr7	-	4754	12	FSM	ENSG00000105835.13	ENST00000424768.2	4769	12	15	0	15	0	multi-exon	FALSE	canonical	1	10	junction_11	186.55586538378	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTAGCTCTATTAGTGAA	NA	False	NA	-28	True	AATAAA	-12	NA	106285951	106248312	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_106251194_106253016_106253152_106254363_106254505_106261587_106261708_106263391_106263618_106268463_106268601_106269153_106269313_106272529_106272659_106274945_106275050_106277022_106277180_106284827_106284982_106285540
H1_mix_00082177	chr7	-	5612	2	FSM	ENSG00000105835.13	ENST00000463871.2	5612	2	0	0	0	0	multi-exon	FALSE	canonical	3	644	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACATCATTTATTAATTT	9719	False	NA	-24	True	ATTAAA	-18	NA	106257477	106250042	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_106251194_106253016
H1_mix_00082179	chr7	-	496	1	FSM	ENSG00000272072.1	ENST00000607036.1	742	1	265	-19	265	19	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAGTATCACTAAGTTCC	NA	False	NA	NA	False	AATAAA	-35	NA	107193035	107192539	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_107192500_107193000
H1_mix_00082180	chr7	-	1359	6	FSM	ENSG00000091136.15	ENST00000676744.1	1359	6	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_3	14.7648230602334	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTGTACTTGTTACTT	8497	False	NA	-9	True	AATAAA	-21	NA	107931738	107923798	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_107924088_107924229_107924390_107926182_107926360_107929063_107929206_107929411_107929620_107931355
H1_mix_00082181	chr7	-	3790	7	FSM	ENSG00000091136.15	ENST00000468518.2	3747	7	-43	0	-43	0	multi-exon	FALSE	canonical	3	258	junction_6	20.6559111797729	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTGTACTTGTTACTT	5393	False	NA	-9	True	AATAAA	-21	NA	107934842	107923798	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_107924088_107924229_107924390_107926182_107926360_107929063_107929206_107929411_107929620_107931355_107931501_107932173
H1_mix_00082183	chr7	-	1127	5	NNC	ENSG00000234273.1	novel	388	4	NA	NA	-127	-11823	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_2	9.24662100445346	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGAATTTTGTTGTTGTT	NA	False	NA	-5	True	AATAAA	-15	NA	109597293	109533803	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_109534029_109562744_109562836_109565250_109565333_109595209_109595686_109597040
H1_mix_00082184	chr7	-	487	4	NNC	ENSG00000184903.10	novel	421	5	NA	NA	54	1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	63.3140321466471	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAAGTAACTCAGAAGCAT	50	False	NA	NA	False	NA	NA	NA	111562433	111487238	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_111487342_111521312_111521450_111561850_111561924_111562259
H1_mix_00082185	chr7	-	1317	6	NIC	ENSG00000146802.13	novel	775	5	NA	NA	0	-49	combination_of_known_junctions	FALSE	canonical	3	4	junction_4	49.2568776923589	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGCTTCAAACTTGTCAA	12	True	NA	NA	False	ATTAAA	-38	NA	112790379	112767223	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_112767745_112772780_112773056_112775175_112775319_112783697_112783757_112784854_112784954_112790159
H1_mix_00082186	chr7	-	3948	6	NNC	ENSG00000164603.12	novel	1271	6	NA	NA	21	31427	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.4730950249404	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATGCCAGTCGCAGTG	-1	True	NA	NA	False	AATGAA	-41	NA	112939854	112787719	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_112787750_112819147_112822374_112832560_112832676_112895568_112895740_112915305_112915448_112939590
H1_mix_00082187	chr7	-	832	3	NNC	ENSG00000164603.12	novel	3940	5	NA	NA	37	-92439	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.5	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTTGTTTTAACTTTT	15	True	NA	NA	False	AATAAA	-16	NA	112939838	112914791	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_112915234_112915305_112915448_112939590
H1_mix_00082188	chr7	-	818	2	FSM	ENSG00000214194.9	ENST00000413744.1	818	2	0	0	0	0	multi-exon	FALSE	canonical	3	364	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACATACATTTATAAATT	79	False	NA	NA	False	AGTAAA	-43	NA	113118534	113117256	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_113117608_113118067
H1_mix_00082189	chr7	-	316	1	FSM	ENSG00000236580.1	ENST00000449443.1	316	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCCCCTGCCCTGCCCTC	NA	False	NA	NA	False	AAGAAA	-5	NA	114297429	114297113	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_114297100_114297400
H1_mix_00082190	chr7	-	3581	13	NIC	ENSG00000077063.11	novel	530	4	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	17.0983673684556	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTTCCATAGACTGTGA	-8	True	NA	-18	True	AATAAA	-29	NA	117873441	117755367	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_117755575_117756554_117756635_117757874_117757971_117760434_117760711_117767058_117767177_117777510_117777766_117780440_117780592_117782861_117782962_117784250_117784455_117791127_117792782_117810764_117810990_117861208_117861317_117873334
H1_mix_00082196	chr7	-	3994	27	NIC	ENSG00000081803.17	novel	4308	28	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_6	21.5702032591038	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCCTGAATGTAGAGTA	7	True	NA	-2	True	AATAAA	-23	NA	122886450	122320036	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_122320339_122325476_122325582_122345573_122345682_122360787_122360821_122360929_122361014_122379367_122379443_122387025_122387174_122388582_122388739_122393440_122393583_122407539_122407697_122416060_122416165_122438340_122438465_122441511_122441576_122451373_122451476_122471374_122471563_122474380_122474518_122490080_122490282_122491311_122491421_122513248_122513316_122554549_122554690_122581178_122581291_122615180_122615300_122621480_122621718_122629247_122629329_122663236_122663570_122736954_122737069_122885998
H1_mix_00082215	chr7	-	1738	4	NIC	ENSG00000122783.17	novel	1738	4	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	92	junction_2	79.2646761734941	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTTGTGCTAATGTCT	8	True	NA	-3	True	AATACA	-34	NA	135170698	135165784	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_135166872_135167731_135167808_135168785_135169061_135170398
H1_mix_00082226	chr7	-	3637	15	NNC	ENSG00000157800.18	novel	3330	15	NA	NA	0	1745	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	151.016420245195	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGGAAGGGAAACTGGAA	NA	False	NA	NA	False	NA	NA	NA	140382474	140291947	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr7_-_140291975_140333752_140335505_140337283_140337350_140343411_140343564_140345215_140345264_140345868_140345971_140348625_140348768_140351272_140351970_140352061_140352147_140355667_140355765_140358639_140358786_140364407_140364492_140369589_140369683_140380281_140380391_140382437
H1_mix_00082228	chr7	-	3153	14	NIC	ENSG00000157800.18	novel	3330	15	NA	NA	10	-1	combination_of_known_splicesites	FALSE	canonical	3	10	junction_11	129.625222178603	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCCATTTCGTTACTTAA	52	False	NA	NA	False	AATAAA	-17	NA	140398447	140333752	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_140335505_140337283_140337350_140343411_140343564_140345215_140345264_140345868_140345971_140348625_140348768_140351272_140351452_140352061_140352147_140355667_140355765_140358639_140358786_140364407_140364492_140380281_140380391_140382437_140382597_140398415
H1_mix_00082243	chr7	-	573	5	NIC	ENSG00000244479.7	novel	422	5	NA	NA	32	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_3	25.377155080899	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTCTGTGATATTC	NA	False	NA	NA	False	AATAAA	-18	NA	144355187	144307144	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_144307233_144311590_144311705_144311883_144311937_144343186_144343299_144354981
H1_mix_00082244	chr7	-	3267	3	NIC	ENSG00000244479.7	novel	773	4	NA	NA	31	2912	combination_of_known_junctions	FALSE	canonical	3	168	junction_1	67	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTGCTGATAGAAAGTC	NA	False	NA	NA	False	NA	NA	NA	144355370	144333855	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_144336978_144343186_144343299_144355337
H1_mix_00082245	chr7	-	707	5	NIC	ENSG00000244479.7	novel	602	4	NA	NA	19	-70	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	67.2955236252754	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGAGGGCTCAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	144355200	144336837	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr7_-_144336978_144343186_144343299_144350717_144350825_144354031_144354161_144354981
H1_mix_00082247	chr7	-	2001	4	Antisense	novelGene_ENSG00000174469.23_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	19.7540431867054	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGAAAAGGCTTGTCTT	NA	False	NA	-10	True	AATAAA	-22	NA	146248905	146233450	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr7_-_146235042_146237454_146237516_146238742_146238854_146248667
H1_mix_00082248	chr7	-	3630	7	FSM	ENSG00000181220.18	ENST00000458143.7	3846	7	164	52	88	-52	multi-exon	FALSE	canonical	3	79	junction_1	39.8723658133745	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTGAAAAATAAGAGAAAAC	146	False	NA	-76	True	NA	NA	NA	149497645	149472845	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_-_149475484_149476921_149477048_149477563_149477756_149492858_149492973_149493988_149494116_149494203_149494504_149497512
H1_mix_00082274	chr7	+	369	1	Intergenic	novelGene_1328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2744	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCAGGCAGAGAAGGCCT	871	False	NA	NA	False	NA	NA	NA	929758	930127	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_929800_930100
H1_mix_00082275	chr7	+	256	1	Intergenic	novelGene_1337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGGACTTACCCTCCACT	NA	False	NA	NA	False	NA	NA	NA	6959583	6959839	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_6959600_6959800
H1_mix_00082276	chr7	+	808	1	Intergenic	novelGene_1346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAAGCCTGTTTAGTGGT	4802	False	NA	5	True	AATAAA	-16	NA	22708463	22709271	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_22708500_22709300
H1_mix_00082277	chr7	+	1927	1	FSM	ENSG00000289109.1	ENST00000691216.1	726	1	-67	-1134	-67	1134	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAGTGTGTACATATGT	6568	False	NA	1	True	AATAAA	-11	NA	23474579	23476506	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr7_+_23474600_23476500
H1_mix_00082279	chr7	+	237	1	Intergenic	novelGene_1356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGAGCTTAATGTGTAGGG	NA	False	NA	NA	False	NA	NA	NA	32839218	32839455	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_32839200_32839500
H1_mix_00082280	chr7	+	269	1	Intergenic	novelGene_1370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGCTGACATTTCTAAACA	NA	False	NA	NA	False	NA	NA	NA	72541320	72541589	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_72541300_72541600
H1_mix_00082281	chr7	+	289	1	Intergenic	novelGene_1385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	101192790	101193079	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_101192800_101193100
H1_mix_00082282	chr7	+	462	1	Intergenic	novelGene_1386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCCCGTAACTTTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	101834197	101834659	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_101834200_101834700
H1_mix_00082283	chr7	+	527	1	Intergenic	novelGene_1389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAGAAATACAAGGAA	NA	False	NA	NA	False	AATAAA	-30	NA	104671056	104671583	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_104671100_104671600
H1_mix_00082284	chr7	+	683	1	Intergenic	novelGene_1393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAATGGGGGAATGGTAA	NA	False	NA	NA	False	NA	NA	NA	113235539	113236222	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr7_+_113235500_113236200
H1_mix_00082295	chr8	+	5539	1	FSM	ENSG00000273402.1	ENST00000610248.1	625	1	-4914	0	-4914	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCAGTTTCTCTTTGAAT	66	False	NA	NA	False	ATTAAA	-23	NA	232130	237669	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_232100_237700
H1_mix_00082296	chr8	+	11226	10	FSM	ENSG00000147364.17	ENST00000350302.8	10356	10	0	-870	0	870	multi-exon	FALSE	canonical	3	42	junction_2	2.58676593929396	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTCGTCGCTACAAAAAAAAA	3	True	NA	NA	False	AATATA	-8	NA	406957	478837	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_407067_413072_413214_431340_431445_432885_432936_435614_435708_449989_450084_451268_451454_458368_458552_463006_463151_468714
H1_mix_00082297	chr8	+	2103	8	FSM	ENSG00000147364.17	ENST00000276326.9	2104	8	1	0	1	0	multi-exon	FALSE	canonical	2	8	junction_2	13.6351885702743	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAGGACTAAAAAAAGAT	6118	False	NA	NA	False	AATAAA	-22	NA	413072	469873	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_413214_431340_431445_435614_435708_449989_450084_451268_451454_458368_458552_463006_463151_468714
H1_mix_00082298	chr8	+	7084	3	FSM	ENSG00000182372.10	ENST00000331222.6	7084	3	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	15	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTCTCTATTTCCTTTCT	8	True	NA	27	True	AATATA	-43	NA	1763788	1786570	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_1763886_1770931_1771598_1780249
H1_mix_00082300	chr8	+	7037	4	NNC	ENSG00000182372.10	novel	7084	3	NA	NA	-14	0	intron_retention	TRUE	canonical	0	0	junction_3	75.9473501841901	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTCTCTATTTCCTTTCT	14	False	NA	27	True	AATATA	-43	NA	1763745	1786570	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_1763886_1770931_1771598_1780249_1785462_1785551
H1_mix_00082301	chr8	+	7082	4	NNC	ENSG00000182372.10	novel	7084	3	NA	NA	-14	0	intron_retention	TRUE	canonical	3	32	junction_3	61.1082827628319	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTCTCTATTTCCTTTCT	14	False	NA	27	True	AATATA	-43	NA	1763745	1786570	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_1763886_1770931_1771598_1780249_1785507_1785551
H1_mix_00082302	chr8	+	1807	3	FSM	ENSG00000182372.10	ENST00000635751.1	1807	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	82	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACACCTGTAATCCCAGC	-4	True	NA	NA	False	ACTAAA	-28	NA	1763776	1781225	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_1763942_1770931_1771598_1780249
H1_mix_00082305	chr8	+	5652	29	FSM	ENSG00000104728.16	ENST00000349830.8	5648	29	-4	0	-4	0	multi-exon	FALSE	canonical	3	22	junction_8	32.4889306109773	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGATGAGTTGCCTCTTT	-20	True	NA	30	True	AATAAA	-22	NA	1823921	1958641	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_1824114_1843352_1843437_1857959_1858116_1859896_1860185_1864372_1864437_1866525_1866603_1869193_1869251_1876570_1876735_1880047_1880165_1882634_1882750_1885600_1885708_1893568_1893647_1894392_1894573_1896332_1896450_1898432_1898526_1903280_1903452_1905570_1905717_1909294_1909471_1922963_1923080_1923467_1923596_1923773_1923875_1925282_1925405_1926376_1926464_1928426_1928651_1929285_1929444_1933799_1933943_1945480_1945656_1952704_1952828_1956748
H1_mix_00082306	chr8	+	5472	28	FSM	ENSG00000104728.16	ENST00000520359.5	5472	28	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	29.0515836578929	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGATGAGTTGCCTCTTT	17	False	NA	30	True	AATAAA	-22	NA	1823987	1958641	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_1824114_1843352_1843437_1857959_1858116_1859896_1860185_1864369_1864437_1866525_1866603_1869193_1869251_1876570_1876735_1882634_1882750_1885600_1885708_1893568_1893647_1894392_1894573_1896332_1896450_1898432_1898526_1903280_1903452_1905570_1905717_1909294_1909471_1922963_1923080_1923467_1923596_1923773_1923875_1925282_1925405_1926376_1926464_1928426_1928651_1929285_1929444_1933799_1933943_1945480_1945656_1952704_1952828_1956748
H1_mix_00082307	chr8	+	5648	30	FSM	ENSG00000104728.16	ENST00000518288.5	5648	30	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	39.3539383207771	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGATGAGTTGCCTCTTT	44	False	NA	30	True	AATAAA	-22	NA	1824014	1958641	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_1824114_1826046_1826136_1843352_1843437_1857959_1858116_1859896_1860185_1864369_1864437_1866525_1866603_1869193_1869251_1876570_1876735_1880047_1880165_1882634_1882750_1885600_1885708_1893568_1893647_1894392_1894573_1896332_1896450_1898435_1898526_1903280_1903452_1905570_1905717_1909294_1909471_1922963_1923080_1923467_1923596_1923773_1923875_1925282_1925405_1926376_1926464_1928426_1928651_1929285_1929444_1933799_1933943_1945480_1945656_1952704_1952828_1956748
H1_mix_00082308	chr8	+	7290	8	NNC	ENSG00000104728.16	novel	2349	4	NA	NA	476	4821	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	29.7794614882575	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTGTGACTGATAAAAGAG	520	False	NA	NA	False	AATAAA	-14	NA	1824490	1875952	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_1824517_1843352_1843437_1857959_1858116_1859896_1860185_1864372_1864509_1866525_1866603_1869193_1874797_1875032
H1_mix_00082309	chr8	+	6543	19	NIC	ENSG00000104728.16	novel	5480	29	NA	NA	0	0	intron_retention	FALSE	canonical	3	76	junction_4	19.2405981529668	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGCAGTAGGATGAGTT	34	False	NA	22	True	AATAAA	-14	NA	1882655	1958633	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_1882750_1885600_1885708_1893568_1893647_1894392_1894573_1896332_1896450_1898432_1898526_1903280_1905717_1909294_1909471_1922963_1923080_1923467_1923596_1923773_1923875_1925282_1925405_1926376_1926464_1928426_1928651_1929285_1929444_1933799_1933943_1945480_1945656_1952704_1952828_1956748
H1_mix_00082310	chr8	+	7087	2	FSM	ENSG00000176595.4	ENST00000320248.4	6911	2	-176	0	-176	0	multi-exon	FALSE	canonical	3	18	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGATGTGCCCCGAGTG	1604	False	NA	21	True	AATAAA	-21	NA	1973500	2006936	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_1973936_2000284
H1_mix_00082311	chr8	+	1057	1	FSM	ENSG00000254244.1	ENST00000517543.1	1253	1	254	-58	254	58	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGAAAATCAAGCAATATG	270	False	NA	NA	False	NA	NA	NA	4787585	4788642	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_4787600_4788600
H1_mix_00082312	chr8	+	3753	8	FSM	ENSG00000147316.15	ENST00000519480.6	3773	8	20	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	20.6318556942354	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTACTTGTTGCTGTTGT	-20	True	NA	23	True	AATAAA	-31	NA	6406611	6447419	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_6406690_6409278_6409371_6414764_6414884_6431498_6431587_6436047_6436163_6438952_6439097_6442066_6442157_6444392
H1_mix_00082313	chr8	+	8023	14	FSM	ENSG00000147316.15	ENST00000344683.10	8008	14	-15	0	0	0	multi-exon	FALSE	canonical	3	40	junction_12	42.0102833283167	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCAGTCTCACTCTGGAA	-20	True	NA	NA	False	AATAAA	-27	NA	6406611	6648508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_6406690_6409278_6409371_6414764_6414884_6431498_6431587_6436047_6436163_6438952_6439097_6442066_6442157_6444392_6445548_6455142_6455253_6477593_6477632_6480713_6480877_6499851_6499930_6621453_6621692_6642993
H1_mix_00082314	chr8	+	5534	8	FSM	ENSG00000155189.12	ENST00000285518.11	5237	8	-297	0	-297	0	multi-exon	FALSE	canonical	3	925	junction_7	59.7805510656625	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGTGATAAAAAGTTATTT	-33	True	NA	16	True	AATAAA	-22	NA	6708344	6761503	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_6708888_6724869_6724940_6730710_6730827_6732560_6732651_6741660_6741752_6747669_6747829_6755050_6755175_6757162
H1_mix_00082315	chr8	+	504	2	Antisense	novelGene_ENSG00000284614.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGCGTCCCCGGCACCCCC	NA	False	NA	NA	False	NA	NA	NA	7220288	7227790	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr8_+_7220385_7227382
H1_mix_00082316	chr8	+	4883	2	Intergenic	novelGene_1422	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	65	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTTTTTTTTTTCTTAT	NA	False	NA	NA	False	AATAAA	-32	NA	7402589	7412671	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_7402888_7408086
H1_mix_00082317	chr8	+	1391	1	FSM	ENSG00000284617.1	ENST00000641758.1	218	1	-220	-953	-220	953	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAACATGGTGAAGCCTCA	NA	False	NA	NA	False	NA	NA	NA	7611252	7612643	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_7611300_7612600
H1_mix_00082318	chr8	+	437	2	Antisense	novelGene_ENSG00000284655.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCCCTTCGTCGCGTCCCC	NA	False	NA	NA	False	NA	NA	NA	7678942	7686376	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr8_+_7679166_7686162
H1_mix_00082319	chr8	+	1395	4	FSM	ENSG00000285720.1	ENST00000650426.1	1395	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGCAGGTGGCAGGGGCT	NA	False	NA	NA	False	NA	NA	NA	7746033	7749044	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_7746157_7746650_7746851_7747308_7747418_7748081
H1_mix_00082320	chr8	+	216	1	FSM	ENSG00000284603.1	ENST00000642045.1	216	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGATGCGGGCGCGGG	81	False	NA	NA	False	NA	NA	NA	8059458	8059674	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_8059500_8059700
H1_mix_00082321	chr8	+	2303	3	NNC	ENSG00000284606.1	novel	3196	4	NA	NA	-25	-112845	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	17.5	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	169	False	NA	NA	False	NA	NA	NA	8059546	8067682	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_8059675_8065119_8065188_8065575
H1_mix_00082322	chr8	+	544	2	NNC	ENSG00000284606.1	novel	3297	4	NA	NA	-46	-108506	at_least_one_novel_splicesite	FALSE	canonical	3	191	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTTTGTAAAGAGAATG	77	False	NA	NA	False	AATAAA	-41	NA	8065599	8072021	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_8065817_8071694
H1_mix_00082323	chr8	+	3665	2	NNC	ENSG00000284606.1	novel	3196	4	NA	NA	109043	15	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTGTCTGAGGAGTTTT	NA	False	NA	8	True	AATAAA	-21	NA	8174688	8180542	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_8175566_8177754
H1_mix_00082324	chr8	+	1895	11	NNC	ENSG00000173295.9	novel	1858	9	NA	NA	90	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	7.47261667690776	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTCGTGTTGTCTGTTG	152	False	NA	7	True	ATTAAA	-17	NA	8228742	8244863	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_8228798_8230842_8230906_8232793_8232875_8234482_8234585_8235815_8235950_8236031_8236300_8237125_8237276_8241540_8241963_8242315_8242433_8244098_8244323_8244584
H1_mix_00082325	chr8	+	1570	3	NNC	ENSG00000173295.9	novel	2829	2	NA	NA	0	0	intron_retention	FALSE	canonical	2	4	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTCGTGTTGTCTGTTG	NA	False	NA	7	True	ATTAAA	-17	NA	8241274	8244863	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_8241963_8242315_8242433_8244098
H1_mix_00082326	chr8	+	465	2	Intergenic	novelGene_1432	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	37	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAAGGCAGAGTGTTGCT	NA	False	NA	13	True	AATAAA	-13	NA	8390044	8399320	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_8390263_8399073
H1_mix_00082327	chr8	+	2160	1	FSM	ENSG00000253958.2	ENST00000519106.2	2160	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTCAGTATAGCCACAAAA	11	True	NA	18	True	AATAAA	-15	NA	8701936	8704096	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_8701900_8704100
H1_mix_00082328	chr8	+	2324	2	Antisense	novelGene_ENSG00000147324.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACGGTGTTCCATTAATGC	NA	False	NA	NA	False	NA	NA	NA	8873726	8877320	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr8_+_8875650_8876919
H1_mix_00082329	chr8	+	299	3	FSM	ENSG00000233609.3	ENST00000520582.1	722	3	-98	521	-98	-521	multi-exon	FALSE	canonical	1	1	junction_2	0.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCGCGGGTCCTCCCTCTG	NA	False	NA	NA	False	NA	NA	NA	8961101	8963267	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_8961255_8962447_8962544_8963217
H1_mix_00082330	chr8	+	5906	2	ISM	ENSG00000104626.15	ENST00000520684.5	828	6	-106	4774	-21	-4774	intron_retention	FALSE	canonical	3	170	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCTTACATCCTCTTC	NA	False	NA	NA	False	NA	NA	NA	9002822	9013526	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_9003172_9007969
H1_mix_00082331	chr8	+	4521	7	FSM	ENSG00000104626.15	ENST00000250263.8	4521	7	0	0	0	0	multi-exon	TRUE	canonical	3	146	junction_6	19.0408916691303	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCATTCTCATTTGTTTT	-17	True	NA	31	True	AATAAA	-14	NA	9002896	9033338	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_9003172_9007969_9008149_9011541_9011753_9016321_9016406_9018296_9018407_9020349_9020465_9029791
H1_mix_00082332	chr8	+	859	5	NNC	ENSG00000104626.15	novel	392	3	NA	NA	12832	159	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3.76662979332984	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATGATAATAATAATAATAA	NA	False	NA	NA	False	AATAAA	-30	NA	9062649	9100260	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_9062785_9075823_9075918_9088459_9088570_9096742_9096861_9099858
H1_mix_00082334	chr8	+	9625	27	FSM	ENSG00000173273.16	ENST00000310430.11	9622	27	-3	0	-3	0	multi-exon	FALSE	canonical	3	141	junction_13	17.5155045433548	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGTGTGGATAGCAGTT	-12	True	NA	15	True	AATAAA	-16	NA	9555908	9782346	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_9556613_9580158_9580384_9615581_9615678_9679950_9679988_9680724_9680801_9704662_9704758_9706186_9706254_9706810_9706998_9708370_9708493_9709954_9710047_9710141_9710221_9720373_9720546_9726640_9726721_9730889_9731036_9733278_9733445_9734864_9735085_9735376_9735487_9748023_9748213_9751608_9751847_9752543_9752627_9761515_9761637_9763146_9763245_9764715_9764791_9765691_9765798_9766238_9766426_9770105_9770263_9776649
H1_mix_00082335	chr8	+	1531	6	FSM	ENSG00000175806.15	ENST00000317173.9	1512	6	-23	4	-23	2	multi-exon	FALSE	canonical	3	20	junction_3	6.06630035524124	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACTGCCTGACATCTCCT	45	False	NA	NA	False	AATAAA	-20	NA	10054268	10428887	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_10054659_10207832_10207902_10245103_10245224_10301533_10301639_10319882_10319990_10428147
H1_mix_00082336	chr8	+	4852	1	Genic_Genomic	ENSG00000253641.6	novel	NA	NA	NA	NA	1757	3756	mono-exon	FALSE	NA	NA	NA	NA	NA	411	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGATAGAAAACATTAAAATA	8412	False	NA	NA	False	NA	NA	NA	10481292	10486144	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr8_+_10481300_10486100
H1_mix_00082337	chr8	+	2382	1	FSM	ENSG00000272505.1	ENST00000606115.1	2860	1	35	443	35	-443	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTAACTCCAGCTGATGT	NA	False	NA	NA	False	NA	NA	NA	10486841	10489223	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_10486800_10489200
H1_mix_00082338	chr8	+	268	1	FSM	ENSG00000231965.4	ENST00000488887.2	520	1	-208	460	-208	-460	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATGTTCACTTTACAAAC	NA	False	NA	NA	False	TTTAAA	-3	NA	11174842	11175110	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_11174800_11175100
H1_mix_00082339	chr8	+	2381	1	FSM	ENSG00000270076.1	ENST00000602443.1	707	1	-1685	11	-1685	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACTTCTAGAAAATAGG	137	False	NA	2	True	AATAAA	-14	NA	11201279	11203660	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_11201300_11203700
H1_mix_00082340	chr8	+	7081	10	FSM	ENSG00000104643.10	ENST00000221086.8	7081	10	0	0	0	0	multi-exon	TRUE	canonical	3	104	junction_3	14.0773875241883	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGGGCTTATTTGAATT	-13	True	NA	20	True	AATAAA	-33	NA	11284815	11328146	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_11285071_11295193_11295303_11300022_11300149_11304840_11305015_11306189_11306408_11309526_11309689_11314922_11315065_11316672_11316894_11319686_11319839_11322624
H1_mix_00082341	chr8	+	1974	10	FSM	ENSG00000104643.10	ENST00000526292.1	1960	10	-14	0	-14	0	multi-exon	FALSE	canonical	2	2	junction_1	43.2203655699486	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCATTTGTGTTTCATG	251	False	NA	-1	True	AATAGA	-11	NA	11285079	11323057	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_11285317_11295193_11295303_11300022_11300149_11304840_11305015_11306189_11306408_11309526_11309689_11314922_11315065_11316672_11316894_11319686_11319839_11322624
H1_mix_00082342	chr8	+	3528	8	FSM	ENSG00000136574.19	ENST00000622443.3	3508	8	-20	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	176.521837696285	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTTCCCTCGTCCCTTA	-7	True	NA	21	True	AATAAA	-13	NA	11704201	11759994	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_11704305_11705913_11706034_11707855_11708929_11748918_11749086_11750110_11750237_11755045_11755134_11756934_11757084_11758292
H1_mix_00082343	chr8	+	686	5	FSM	ENSG00000136574.19	ENST00000526716.5	686	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	174.122083608025	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACGCGCCATGGCTGGGG	200	False	NA	NA	False	NA	NA	NA	11704150	11757082	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_11704305_11748915_11749086_11750110_11750237_11755045_11755134_11756934
H1_mix_00082344	chr8	+	3419	7	FSM	ENSG00000136574.19	ENST00000532059.6	3419	7	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_2	111.951874581099	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGTCCCTTAGTGGTCTT	-7	True	NA	29	True	AATAAA	-21	NA	11704201	11760002	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_11704305_11707855_11708929_11748915_11749086_11750110_11750237_11755045_11755134_11756934_11757084_11758292
H1_mix_00082345	chr8	+	3416	7	FSM	ENSG00000136574.19	ENST00000335135.8	3414	7	-2	0	0	0	multi-exon	FALSE	canonical	3	316	junction_2	42.2035411889676	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGTCCCTTAGTGGTCTT	-7	True	NA	29	True	AATAAA	-21	NA	11704201	11760002	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_11704305_11707855_11708929_11748918_11749086_11750110_11750237_11755045_11755134_11756934_11757084_11758292
H1_mix_00082346	chr8	+	2765	5	FSM	ENSG00000154328.16	ENST00000284503.7	2699	5	-71	5	0	0	multi-exon	FALSE	canonical	3	117	junction_1	33.8045854877707	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGCTGTTTTTGTCTTTAT	NA	False	NA	12	True	AATAAA	-12	NA	11769638	11787340	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_11770336_11771445_11771586_11779597_11779951_11783202_11783400_11785962
H1_mix_00082347	chr8	+	2221	5	FSM	ENSG00000154328.16	ENST00000436750.7	2226	5	0	5	0	0	multi-exon	FALSE	canonical	3	79	junction_1	47.1274866717927	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGCTGTTTTTGTCTTTAT	NA	False	NA	12	True	AATAAA	-12	NA	11769638	11787340	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_11769792_11771445_11771586_11779597_11779951_11783202_11783400_11785962
H1_mix_00082348	chr8	+	2323	6	FSM	ENSG00000154328.16	ENST00000455213.6	2323	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	63.8172390502754	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGCTGTTTTTGTCTTTAT	-39	True	NA	12	True	AATAAA	-12	NA	11769698	11787340	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_11769792_11770173_11770336_11771445_11771586_11779597_11779951_11783202_11783400_11785962
H1_mix_00082349	chr8	+	2062	4	FSM	ENSG00000154328.16	ENST00000403422.7	2016	4	-51	5	19	0	multi-exon	FALSE	canonical	3	10	junction_1	84.040995287353	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGCTGTTTTTGTCTTTAT	-12	True	NA	12	True	AATAAA	-12	NA	11769657	11787340	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_11769792_11779597_11779951_11783202_11783400_11785962
H1_mix_00082351	chr8	+	404	1	FSM	ENSG00000227203.3	ENST00000524415.1	382	1	-22	0	-22	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATCCGAGTCATACAAAC	5	True	NA	NA	False	AAGAAA	-6	NA	11789982	11790386	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_11790000_11790400
H1_mix_00082352	chr8	+	1536	5	FSM	ENSG00000079459.13	ENST00000446331.6	1558	5	22	0	22	0	multi-exon	FALSE	canonical	3	126	junction_1	1328.57084869419	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGCTTTTGACCTTTTA	7	False	NA	-74	True	TTTAAA	-29	NA	11802664	11839210	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_11802911_11826078_11826216_11830243_11830421_11831517_11831671_11838387
H1_mix_00082353	chr8	+	2314	9	FSM	ENSG00000079459.13	ENST00000623368.3	2368	9	54	0	22	0	multi-exon	FALSE	canonical	1	8	junction_1	1322.69818930851	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACAGTTCGCTTGAAAG	7	False	NA	20	True	AATAAA	-25	NA	11802664	11839304	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_11802932_11803321_11803519_11808793_11808892_11809666_11809851_11821749_11821879_11826023_11826216_11830243_11830421_11831517_11831671_11838387
H1_mix_00082354	chr8	+	2037	8	FSM	ENSG00000079459.13	ENST00000220584.9	2035	8	-2	0	0	0	multi-exon	FALSE	canonical	3	2415	junction_3	304.397766089043	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCAAGTACAGTTCGCT	-19	True	NA	14	True	AATAAA	-19	NA	11802738	11839298	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_11802932_11808793_11808892_11809666_11809851_11821749_11821879_11826023_11826216_11830243_11830421_11831517_11831671_11838387
H1_mix_00082355	chr8	+	660	2	FSM	ENSG00000079459.13	ENST00000527045.1	642	2	-18	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTTTTGTCCCCAGTA	8	True	NA	6	True	AATAAA	-3	NA	11802765	11803815	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_11802932_11803321
H1_mix_00082356	chr8	+	1596	8	FSM	ENSG00000079459.13	ENST00000525900.5	1596	8	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	1025.20908768377	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATCCTACTTAGTATGAT	8	True	NA	-31	True	NA	NA	NA	11802765	11838905	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_11802911_11808793_11808892_11809666_11809851_11821749_11821879_11826023_11826216_11830243_11830421_11831517_11831671_11838387
H1_mix_00082357	chr8	+	2841	7	FSM	ENSG00000079459.13	ENST00000525954.5	1890	7	-1079	128	-605	0	multi-exon	FALSE	canonical	3	2415	junction_2	326.541345008561	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGGCTCATGGCAGAGCA	4188	False	NA	-97	True	NA	NA	NA	11807337	11838839	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_11808892_11809666_11809851_11821749_11821879_11826023_11826216_11830243_11830421_11831517_11831671_11838387
H1_mix_00082359	chr8	+	4056	4	FSM	ENSG00000255052.5	ENST00000666566.1	4076	4	20	0	-2	0	multi-exon	TRUE	canonical	1	1	junction_3	6.0184900284226	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATAGTACCTTCCCTTGAA	NA	False	NA	NA	False	CATAAA	-23	NA	12115807	12171841	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_12116326_12121986_12122051_12145422_12145701_12168645
H1_mix_00082360	chr8	+	993	2	FSM	ENSG00000255495.1	ENST00000528514.1	1361	2	368	0	368	0	multi-exon	FALSE	canonical	3	29	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAATAGCTATTGTCTTTC	NA	False	NA	NA	False	GATAAA	-25	NA	12194834	12196280	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_12195438_12195890
H1_mix_00082361	chr8	+	1273	3	NNC	ENSG00000255495.1	novel	1361	2	NA	NA	819	3815	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	14.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGGCCAGGTGACTGTGGA	207	False	NA	NA	False	CATAAA	-13	NA	12195285	12200095	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_12195438_12195890_12196239_12199322
H1_mix_00082363	chr8	+	2338	5	Intergenic	novelGene_1435	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	27	junction_2	157.881284514663	35	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTGTCTGCATCCAGTA	15	False	NA	NA	False	NA	NA	NA	12437224	12567161	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_12437711_12438163_12438512_12444755_12444895_12530942_12531032_12565885
H1_mix_00082364	chr8	+	721	1	FSM	ENSG00000270154.1	ENST00000602979.1	661	1	6	-66	6	66	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTGAAACCCAGGCACAT	NA	False	NA	69	True	AATACA	-40	NA	12476467	12477188	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_12476500_12477200
H1_mix_00082365	chr8	+	1714	4	Antisense	novelGene_ENSG00000242607.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	2.35702260395516	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATGTGCTGAGAAATCTC	NA	False	NA	NA	False	AGTAAA	-25	NA	12480723	12572977	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr8_+_12480936_12530942_12531032_12570704_12570815_12571674
H1_mix_00082366	chr8	+	3869	1	Intergenic	novelGene_1441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCCCTATCTACAAAAAAAAA	4082	False	NA	NA	False	AAAACA	-10	NA	12525448	12529317	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_12525400_12529300
H1_mix_00082367	chr8	+	1192	1	Intergenic	novelGene_1444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12571178	12572370	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_12571200_12572400
H1_mix_00082368	chr8	+	6121	6	NNC	ENSG00000250305.9	novel	668	4	NA	NA	-25	90	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	4.28952211790544	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACATTCAACTATCGCAAG	0	True	NA	NA	False	NA	NA	NA	12951609	13026255	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_12951691_12952062_12952359_12990833_12991001_13006201_13006357_13012683_13012858_13021007
H1_mix_00082369	chr8	+	2267	3	FSM	ENSG00000250305.9	ENST00000528753.2	2392	3	-10	135	-10	-134	multi-exon	FALSE	canonical	3	7	junction_2	4.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGCTTGCTGAAGATGG	15	True	NA	NA	False	NA	NA	NA	12951624	13007536	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_12952359_12990833_12991032_13006201
H1_mix_00082371	chr8	+	1803	1	FSM	ENSG00000164743.5	ENST00000297324.5	1420	1	8	-391	8	391	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTTATCAAGTGGATC	-5	True	NA	NA	False	AATAAA	-20	NA	13566876	13568679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_13566900_13568700
H1_mix_00082372	chr8	+	1564	9	FSM	ENSG00000104723.21	ENST00000506802.5	1546	9	-18	0	-8	0	multi-exon	TRUE	canonical	3	8	junction_8	118.27503699006	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTGAAAATTAAACTTACT	NA	False	NA	-21	True	GATAAA	-25	NA	15540214	15764613	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_15540569_15623079_15623250_15650696_15650815_15659506_15659648_15662155_15662297_15673746_15673837_15730665_15730730_15743537_15743613_15764202
H1_mix_00082373	chr8	+	1639	9	FSM	ENSG00000104723.21	ENST00000515859.5	1627	9	-12	0	-8	0	multi-exon	FALSE	canonical	0	0	junction_6	114.872143598873	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACGAATAGTGTTTTGTT	NA	False	NA	27	True	ATTAAA	-35	NA	15540214	15764661	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_15540569_15623079_15623250_15650696_15650815_15659506_15659648_15662155_15662297_15673746_15673837_15743537_15743613_15748374_15748466_15764202
H1_mix_00082374	chr8	+	3639	10	FSM	ENSG00000104723.21	ENST00000382020.8	3683	10	4	40	0	-29	multi-exon	FALSE	canonical	3	246	junction_9	47.0518495195447	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGGCATTAGATATTCA	4	True	NA	NA	False	NA	NA	NA	15540226	15766609	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_15540569_15623079_15623250_15650696_15650815_15659506_15659648_15662155_15662297_15673746_15673837_15730665_15730730_15743537_15743613_15748374_15748466_15764202
H1_mix_00082375	chr8	+	3612	11	FSM	ENSG00000104723.21	ENST00000503731.6	3697	11	0	85	0	-85	multi-exon	FALSE	canonical	0	0	junction_10	120.832114936386	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCATTTTGTAATAACATC	-3	True	NA	NA	False	TATAAA	-17	NA	15540262	15766553	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_15540569_15623079_15623250_15650696_15650815_15659506_15659648_15662155_15662297_15673746_15673837_15730665_15730730_15743537_15743613_15748374_15748466_15757790_15757856_15764202
H1_mix_00082376	chr8	+	1500	11	NIC	ENSG00000104723.21	novel	3697	11	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	120.832114936386	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTTAACTTACTGAAAACT	6	True	NA	16	True	AATAAA	-19	NA	15540271	15758277	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_15540569_15623079_15623250_15650696_15650815_15659506_15659648_15662155_15662297_15673746_15673837_15730665_15730730_15743537_15743613_15748374_15748466_15757790_15757856_15758029
H1_mix_00082379	chr8	+	5924	13	FSM	ENSG00000104219.13	ENST00000262096.13	5924	13	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_7	22.9871642927574	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGTGAAAGCTGAATACT	-23	True	NA	14	True	AATGAA	-16	NA	17156481	17224799	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_17156854_17184788_17184816_17186330_17186426_17195503_17195625_17197581_17197652_17198380_17198414_17205654_17205776_17207959_17208093_17209931_17210059_17210387_17210481_17215236_17215350_17217171_17217247_17220255
H1_mix_00082380	chr8	+	4519	12	FSM	ENSG00000155975.10	ENST00000324849.9	4519	12	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_3	23.3138840625633	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTTTGTCATTTTTTAA	1	True	NA	12	True	AATAAA	-22	NA	17246957	17298024	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_17247370_17265906_17265982_17268257_17268373_17268855_17268957_17274732_17274959_17276396_17276468_17280027_17280156_17280238_17280298_17280374_17280444_17284472_17284617_17286346_17286428_17294986
H1_mix_00082383	chr8	+	7640	13	FSM	ENSG00000003989.18	ENST00000494857.6	7615	13	-69	44	-69	-39	multi-exon	FALSE	canonical	3	40	junction_1	11.2432078261599	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGATGTGGTGTATTTTT	2668	False	NA	28	True	AATAAA	-35	NA	17497018	17570522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_17497238_17502256_17502303_17543317_17543716_17544450_17544607_17548677_17548844_17550300_17550435_17551763_17551987_17554559_17554700_17558294_17558398_17560327_17560534_17561943_17562111_17563602_17563712_17564949
H1_mix_00082387	chr8	+	8707	40	NIC	ENSG00000078674.19	novel	8652	39	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_24	98.0845212407893	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGAATTGTATTTTCTTT	2	True	NA	19	True	AATAAA	-19	NA	17922989	18029948	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17947185_17947364_17950614_17950725_17952969_17953187_17955469_17955654_17956603_17956778_17957263_17957422_17957539_17957776_17960013_17960166_17960314_17960445_17962033_17962175_17963100_17963292_17964567_17964769_17965998_17966219_17966327_17966474_17966979_17967171_17969576_17969749_17972328_17972688_17980590_17980756_17983232_17983290_17985446_17985620_17985958_17986088_17989858_17989980_17991541_17991701_17993482_17993620_18006262_18006398_18009546_18009745_18010608_18010669_18011236_18011367_18011666_18011828_18013963_18014037_18014583_18014841_18025360_18025454_18025543_18025659_18027636
H1_mix_00082390	chr8	+	6388	39	NIC	ENSG00000078674.19	novel	6443	39	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_7	94.3084796568159	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTTGACACTGCTTTTT	2	True	NA	16	True	AATAAA	-26	NA	17922989	18027758	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17940041_17940159_17947185_17947364_17950614_17950725_17952969_17953187_17955469_17955654_17956603_17956778_17957263_17957422_17957539_17957776_17960013_17960166_17960314_17960445_17962033_17962175_17963100_17963292_17964567_17964769_17965998_17966219_17966327_17966474_17966979_17967171_17969576_17969749_17972328_17972688_17985446_17985620_17985958_17986088_17989858_17989980_17991541_17991677_17993482_17993620_18006262_18006398_18009546_18009745_18010608_18010669_18011236_18011367_18011666_18011828_18013963_18014037_18014583_18014841_18025360_18025454_18025543_18025659_18027636
H1_mix_00082391	chr8	+	6443	39	FSM	ENSG00000078674.19	ENST00000519253.5	6443	39	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_28	87.0454875194971	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTAGTTTAAAACATCAGA	40	False	NA	61	True	NA	NA	NA	17923027	18027803	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17947185_17947364_17950614_17950725_17952969_17953187_17955469_17955654_17956603_17956778_17957263_17957422_17957539_17957776_17960013_17960166_17960314_17960445_17962033_17962175_17963100_17963292_17964567_17964769_17965998_17966219_17966327_17966474_17966979_17967171_17969576_17969749_17972328_17972688_17980590_17980756_17985446_17985620_17985958_17986088_17989858_17989980_17991541_17991677_17993482_17993620_18006262_18006398_18009546_18009745_18010608_18010669_18011236_18011367_18011666_18011828_18013963_18014037_18014583_18014841_18025360_18025454_18025543_18025659_18027636
H1_mix_00082392	chr8	+	8571	39	NIC	ENSG00000078674.19	novel	8652	39	NA	NA	0	7	combination_of_known_junctions	FALSE	canonical	3	77	junction_7	91.7723607900884	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATTTTCTTTTAAATTC	40	False	NA	26	True	AATAAA	-26	NA	17923027	18029955	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17940041_17940159_17947185_17947364_17950614_17950725_17952969_17953187_17955469_17955654_17956603_17956778_17957263_17957422_17957539_17957776_17960013_17960166_17960314_17960445_17962033_17962175_17963100_17963292_17964567_17964769_17965998_17966219_17966327_17966474_17966979_17967171_17969576_17969749_17972328_17972688_17985446_17985620_17985958_17986088_17989858_17989980_17991541_17991701_17993482_17993620_18006262_18006398_18009546_18009745_18010608_18010669_18011236_18011367_18011666_18011828_18013963_18014037_18014583_18014841_18025360_18025454_18025543_18025659_18027636
H1_mix_00082398	chr8	+	754	3	FSM	ENSG00000078674.19	ENST00000523896.1	740	3	-14	0	-14	0	multi-exon	FALSE	canonical	3	366	junction_1	65.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTTGACACTGCTTTTT	NA	False	NA	16	True	AATAAA	-26	NA	18024936	18027758	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_18025454_18025543_18025659_18027636
H1_mix_00082403	chr8	+	1315	2	FSM	ENSG00000156006.5	ENST00000286479.4	1285	2	-30	0	-30	0	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTGTCTCTAAAGTTTA	0	True	NA	10	True	AATAAA	-17	NA	18391251	18401218	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_18391346_18399997
H1_mix_00082406	chr8	+	556	3	FSM	ENSG00000104613.12	ENST00000518424.1	556	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	177.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACAAACCCAATTTTTAA	-6	True	NA	NA	False	NA	NA	NA	19817390	19819653	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_19817667_19818274_19818474_19819572
H1_mix_00082408	chr8	+	2517	17	FSM	ENSG00000104613.12	ENST00000397977.8	2517	17	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_15	39.9029584586156	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTTAAAAATTTAATTCT	-15	True	NA	18	True	AATAAA	-20	NA	19817415	19852067	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_19817667_19818274_19818343_19819572_19819677_19820378_19820519_19822438_19822521_19823300_19823442_19823872_19824045_19824802_19824973_19826425_19826560_19830405_19830560_19832027_19832111_19833168_19833322_19837051_19837161_19842847_19842928_19844075_19844239_19845703_19845798_19851648
H1_mix_00082412	chr8	+	2856	14	FSM	ENSG00000147416.11	ENST00000276390.7	2856	14	0	0	0	0	multi-exon	FALSE	canonical	3	987	junction_8	77.7764205761176	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAAGTGACTCTCTATCTT	-6	True	NA	20	True	AATAAA	-23	NA	20197380	20221696	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_20197543_20204483_20204540_20209432_20209532_20210345_20210440_20210568_20210647_20211176_20211317_20211651_20211754_20212101_20212200_20212781_20212906_20214817_20214969_20216412_20216496_20217219_20217325_20218152_20218283_20220262
H1_mix_00082414	chr8	+	1473	3	ISM	ENSG00000147416.11	ENST00000521442.1	738	4	6298	-34	6298	34	3prime_fragment	FALSE	canonical	3	21	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGTGTGTATCCGTTC	NA	False	NA	12	True	AATATA	-2	NA	20224479	20226853	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_20225407_20225688_20225820_20226438
H1_mix_00082416	chr8	+	569	6	FSM	ENSG00000130227.17	ENST00000521303.5	569	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	127.396389273794	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCCTCTTCTTTTCGCGA	8	True	NA	NA	False	NA	NA	NA	21919756	21974705	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_21919789_21966856_21967004_21969482_21969577_21970143_21970311_21971875_21971969_21974669
H1_mix_00082417	chr8	+	883	6	FSM	ENSG00000130227.17	ENST00000517551.2	883	6	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_3	82.5251476823883	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCACCTGAGGTGGGTG	2640	False	NA	NA	False	NA	NA	NA	21991725	21999674	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_21991975_21994362_21994452_21995491_21995600_21998754_21998838_21999090_21999306_21999535
H1_mix_00082421	chr8	+	1320	5	FSM	ENSG00000158815.11	ENST00000359441.4	1320	5	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_2	104.564274491817	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTATCTGAAGCGGGGC	-2	True	NA	26	True	AATAAA	-17	NA	22042819	22048809	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22042964_22043144_22043182_22046113_22046292_22046526_22046634_22047955
H1_mix_00082422	chr8	+	2578	3	FSM	ENSG00000158815.11	ENST00000524314.1	2578	3	0	0	0	0	multi-exon	FALSE	canonical	3	621	junction_2	14	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGGTTATCTGAAGCGG	1850	False	NA	23	True	AATAAA	-14	NA	22044671	22048806	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22046292_22046526_22046634_22047955
H1_mix_00082427	chr8	+	1181	3	FSM	ENSG00000158863.22	ENST00000498344.2	917	3	-39	-225	-30	214	multi-exon	FALSE	canonical	3	53	junction_1	17	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGGGTGCAGTGTTCCA	1718	False	NA	NA	False	GGGGCT	-2	NA	22089119	22097259	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22089299_22094439_22094519_22096336
H1_mix_00082428	chr8	+	4307	17	FSM	ENSG00000158863.22	ENST00000289921.8	4316	17	5	4	-4	-4	multi-exon	TRUE	canonical	3	53	junction_1	12.9783473524174	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGATGTGTGTGGAGGGG	1	True	NA	NA	False	AATAAA	-10	NA	22089154	22104907	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22089299_22094439_22094519_22096336_22096510_22097515_22097621_22097716_22097840_22098067_22098311_22098422_22098620_22098947_22099057_22099283_22099361_22099703_22099894_22100593_22100740_22100843_22100973_22101439_22101531_22101707_22101852_22102174_22102316_22102527_22102629_22102792
H1_mix_00082435	chr8	+	5494	8	FSM	ENSG00000168495.13	ENST00000397802.8	5494	8	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_4	16.3569868988198	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGCCCTGCGTGGTCCG	97	False	NA	18	True	ATTAAA	-21	NA	22245234	22254600	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22245615_22247220_22247265_22247856_22248009_22248153_22248279_22248480_22248650_22249043_22249310_22250074_22250228_22250395
H1_mix_00082437	chr8	+	5102	23	FSM	ENSG00000197181.12	ENST00000356766.11	5114	23	12	0	-9	0	multi-exon	FALSE	canonical	3	8	junction_20	6.77989248799421	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAGTTGTGTTTGAAAT	7	True	NA	NA	False	AATAAA	-17	NA	22275327	22357568	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22275399_22279340_22279585_22281119_22281208_22281376_22281516_22283033_22283241_22284161_22284273_22287527_22287646_22288541_22288667_22289846_22289928_22290232_22290347_22304020_22304210_22304783_22304869_22305926_22306017_22307932_22308074_22309960_22310075_22311111_22311301_22314327_22314430_22315028_22315146_22316244_22316334_22318169_22318276_22352958_22353213_22354270_22354379_22355348
H1_mix_00082442	chr8	+	2194	14	FSM	ENSG00000120910.15	ENST00000240139.10	2194	14	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_12	8.67697763212528	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGTTTCTGACTTGAAC	-24	True	NA	11	True	AATAAA	-21	NA	22441077	22541125	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22441459_22474953_22475152_22475499_22475625_22498000_22498113_22511085_22511232_22513292_22513433_22522490_22522569_22522654_22522750_22527391_22527518_22528505_22528578_22532224_22532307_22532920_22533019_22539468_22539499_22540614
H1_mix_00082443	chr8	+	2130	13	FSM	ENSG00000120910.15	ENST00000289963.12	2135	13	0	5	0	-5	multi-exon	FALSE	canonical	3	13	junction_12	8.98571397027279	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAACTAGTCAGTCTTC	22	True	NA	23	True	AATAAA	-33	NA	22441123	22541137	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22441459_22474953_22475152_22475499_22475625_22498000_22498113_22511085_22511232_22513292_22513433_22522490_22522569_22522654_22522750_22527391_22527518_22528505_22528578_22532224_22532307_22532920_22533019_22540614
H1_mix_00082445	chr8	+	2863	19	FSM	ENSG00000120896.14	ENST00000517535.5	3067	19	204	0	1	0	multi-exon	FALSE	canonical	1	5	junction_1	321.666666666667	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCGTTTCCTCTAACAGG	14	True	NA	NA	False	NA	NA	NA	22554451	22575048	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22554609_22554862_22554981_22556714_22556909_22558128_22558193_22561334_22561374_22561864_22561932_22563986_22564078_22564282_22564370_22564467_22564522_22565267_22565355_22565825_22566485_22566660_22566714_22566821_22566869_22567060_22567176_22569147_22569274_22570909_22571222_22571717_22571822_22572339_22572447_22574666
H1_mix_00082446	chr8	+	2028	10	FSM	ENSG00000120896.14	ENST00000523965.5	2028	10	0	0	0	0	multi-exon	FALSE	canonical	3	508	junction_1	74.012177843486	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGTCTCTGCGGCCTTTT	3	True	NA	21	True	AATAAA	-16	NA	22565677	22575495	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22565873_22566344_22566485_22566660_22566714_22566821_22566869_22567060_22567176_22569147_22569274_22570909_22571222_22571717_22571822_22572339_22572447_22574666
H1_mix_00082449	chr8	+	1331	8	FSM	ENSG00000120913.24	ENST00000409141.5	1463	8	132	0	3	0	multi-exon	FALSE	canonical	3	25	junction_2	107.714854109906	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGATGTCCCTTCCTTCTT	93	False	NA	15	True	AATAAA	-1	NA	22580602	22594298	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22580698_22581378_22581531_22584820_22584891_22585016_22585163_22585320_22585400_22589297_22589375_22589595_22589742_22593732
H1_mix_00082451	chr8	+	1891	4	FSM	ENSG00000120913.24	ENST00000464275.5	1995	4	112	-8	112	0	multi-exon	FALSE	canonical	3	266	junction_3	32.8734948958377	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGATGTCCCTTCCTTCTT	3180	False	NA	15	True	AATAAA	-1	NA	22588313	22594298	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22589375_22589595_22589742_22591550_22591669_22593732
H1_mix_00082452	chr8	+	2023	7	FSM	ENSG00000241852.11	ENST00000409586.7	2021	7	-2	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	30.9551647099837	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGTGCTTTGTAAACCT	2	True	NA	9	True	ATTAAA	-6	NA	22599598	22604133	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22599761_22600881_22601358_22601711_22601853_22601971_22602081_22602199_22602313_22602560_22602644_22603194
H1_mix_00082453	chr8	+	2056	7	FSM	ENSG00000241852.11	ENST00000289989.10	2056	7	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_5	30	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAAACCTCAGGTGAAT	2	True	NA	18	True	ATTAAA	-15	NA	22599598	22604142	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22599761_22600881_22601358_22601711_22601853_22601971_22602081_22602199_22602313_22602536_22602644_22603194
H1_mix_00082454	chr8	+	1957	6	FSM	ENSG00000241852.11	ENST00000614574.4	1955	6	-2	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	31.1576635837798	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCAGGTGAATAGGAAAGG	2	True	NA	26	True	ATTAAA	-23	NA	22599598	22604150	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22599761_22600881_22601358_22601711_22601853_22601971_22602081_22602199_22602313_22603194
H1_mix_00082457	chr8	+	3980	21	FSM	ENSG00000158941.17	ENST00000389279.7	3980	21	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	215.011970596988	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGAGTGTGTCCTCCACA	-14	True	NA	66	True	AATAAA	-18	NA	22605037	22620471	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22605419_22605735_22605832_22606084_22606177_22606606_22606699_22606909_22607025_22607195_22607326_22607968_22608066_22613016_22613137_22614091_22614315_22614389_22614504_22614837_22615002_22615424_22615597_22615681_22615913_22616011_22616249_22617419_22617565_22617695_22617779_22618348_22618496_22618616_22618729_22618826_22619016_22619149_22619356_22619637
H1_mix_00082460	chr8	+	3558	16	FSM	ENSG00000158941.17	ENST00000520861.5	3560	16	2	0	2	0	multi-exon	FALSE	canonical	0	0	junction_1	241.846415910778	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGAGAGTGTGTCCTCC	1858	False	NA	63	True	AATAAA	-15	NA	22606909	22620468	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22607025_22607235_22607326_22607968_22608066_22613016_22613137_22614091_22614315_22614389_22614504_22614837_22615002_22615424_22615597_22615681_22615913_22616011_22616249_22617419_22617565_22617695_22617779_22618348_22618496_22618616_22618729_22618826_22619016_22619149
H1_mix_00082461	chr8	+	1107	5	FSM	ENSG00000158941.17	ENST00000522599.5	1107	5	0	0	0	0	multi-exon	FALSE	canonical	3	880	junction_3	28.3240180765371	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGCTGTGCCTTAGCCA	7651	False	NA	NA	False	NA	NA	NA	22612702	22615596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22613137_22614091_22614315_22614389_22614504_22614837_22615002_22615424
H1_mix_00082467	chr8	+	2983	5	FSM	ENSG00000173535.15	ENST00000356864.4	1395	5	0	-1588	0	1588	multi-exon	FALSE	canonical	3	37	junction_3	2.5	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTCTCCTTAACAGTGGT	-1	True	NA	NA	False	NA	NA	NA	23102920	23119033	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_23103182_23111719_23111826_23114656_23114771_23115507_23115617_23116640
H1_mix_00082474	chr8	+	1594	8	FSM	ENSG00000104679.12	ENST00000265806.12	1573	8	-21	0	-21	0	multi-exon	FALSE	canonical	3	176	junction_1	42.3421438150827	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTTGAAATGTGGTCTG	-17	True	NA	16	True	AATAAA	-23	NA	23288086	23296279	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_23288158_23288505_23288634_23289015_23289154_23289865_23290470_23291360_23291534_23293302_23293374_23294768_23294865_23295966
H1_mix_00082475	chr8	+	9703	2	FSM	ENSG00000147454.14	ENST00000520654.1	3018	2	-187	-6498	-90	0	multi-exon	FALSE	canonical	3	71	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTGTGGGCTCTGTGGTG	-6	True	NA	22	True	AATAAA	-16	NA	23528865	23575463	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_23529213_23566107
H1_mix_00082477	chr8	+	3415	3	FSM	ENSG00000147454.14	ENST00000518881.5	3404	3	-11	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	65	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-16	True	NA	NA	False	AGTAAA	-16	NA	23528955	23572221	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_23529213_23566107_23568379_23571334
H1_mix_00082479	chr8	+	7572	2	NNC	ENSG00000147454.14	novel	4672	4	NA	NA	1084	0	intron_retention	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTGTGGGCTCTGTGGTG	2	True	NA	22	True	AATAAA	-16	NA	23567859	23575463	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_23572204_23572235
H1_mix_00082486	chr8	+	490	1	FSM	ENSG00000272157.1	ENST00000607735.1	490	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGTATGTATGGAGAAGA	429	False	NA	6	True	AATAAA	-19	NA	24956620	24957110	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_24956600_24957100
H1_mix_00082491	chr8	+	3565	14	FSM	ENSG00000184661.14	ENST00000380665.3	3565	14	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_8	14.8459545622336	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTTTATGTAGAAATAAAT	-4	True	NA	-13	True	AATAAA	-23	NA	25459198	25507873	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_25459474_25460239_25460555_25462053_25462209_25466174_25466326_25468216_25468414_25469895_25469981_25479912_25480125_25483398_25483487_25483965_25484211_25485758_25485838_25487245_25487335_25488551_25488690_25503372_25503545_25506509
H1_mix_00082492	chr8	+	3486	15	FSM	ENSG00000184661.14	ENST00000330560.8	3486	15	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_2	16.8457891547086	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAGAAAACATTCTATTAA	-14	True	NA	25	True	AATAAA	-20	NA	25459232	25507911	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_25459474_25460239_25460301_25460383_25460555_25462053_25462209_25466174_25466326_25468216_25468414_25469895_25469981_25479912_25480125_25483398_25483487_25483965_25484211_25485758_25485838_25487245_25487335_25488551_25488690_25503372_25503545_25506509
H1_mix_00082493	chr8	+	922	7	FSM	ENSG00000184661.14	ENST00000523454.5	922	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	111.47458604244	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAGTAACTTGTTTATCT	9024	False	NA	NA	False	AATAAA	-24	NA	25468270	25485835	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_25468414_25469895_25469981_25472112_25472185_25479912_25480125_25483398_25483487_25483965_25484211_25485758
H1_mix_00082499	chr8	+	875	6	FSM	ENSG00000104765.16	ENST00000523949.5	875	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_5	324.345864780176	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGATGTGTTAAAATTTG	41	False	NA	NA	False	AATAAA	-19	NA	26383196	26505636	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_26383231_26391242_26391427_26395229_26395303_26407999_26408104_26408226_26408377_26505306
H1_mix_00082503	chr8	+	4603	14	FSM	ENSG00000092964.18	ENST00000311151.9	4603	14	0	0	0	0	multi-exon	TRUE	canonical	3	606	junction_5	63.1379629609944	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTCTGTATTGAGATGT	365	False	NA	21	True	AATAAA	-23	NA	26577842	26658178	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_26578294_26581968_26582058_26583798_26583984_26624142_26624308_26626616_26626679_26627214_26627296_26627871_26627941_26634779_26634901_26643438_26643596_26643949_26644092_26647629_26647801_26652256_26652437_26653231_26653398_26655614
H1_mix_00082505	chr8	+	4074	31	FSM	ENSG00000120899.18	ENST00000346049.10	4074	31	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_21	4.15478305356877	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCGGTTTGTTTTGTTTG	8	True	NA	23	True	ATTAAA	-15	NA	27325551	27459386	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_27325682_27397547_27397789_27419894_27420074_27420656_27420745_27422303_27422384_27430092_27430156_27430363_27430419_27430875_27431017_27431397_27431473_27432259_27432362_27433434_27433553_27434092_27434133_27434512_27434560_27435742_27435794_27436250_27436349_27437121_27437207_27437395_27437497_27437764_27437881_27439030_27439132_27439308_27439399_27440236_27440442_27442874_27442984_27444205_27444272_27445793_27445920_27450748_27450896_27451042_27451079_27451484_27451510_27453113_27453161_27454153_27454292_27454530_27454612_27458293
H1_mix_00082507	chr8	+	3787	6	FSM	ENSG00000168077.14	ENST00000301904.4	3787	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_5	6.27375485654325	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGTGTCTTTGAGTCCT	-21	True	NA	14	True	AGTAAA	-16	NA	27633901	27673018	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_27634208_27649701_27649801_27651507_27651628_27656781_27656881_27658495_27659540_27670899
H1_mix_00082509	chr8	+	3775	11	FSM	ENSG00000171320.15	ENST00000305188.13	3754	11	-21	0	-21	0	multi-exon	FALSE	canonical	3	195	junction_4	29.446391969136	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGAGGCTTCCCTTAATC	-14	True	NA	NA	False	NA	NA	NA	27774532	27805316	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_27774608_27775498_27775568_27776361_27777170_27780173_27780268_27783999_27784058_27787884_27788003_27788846_27788979_27791962_27792053_27792667_27792812_27799540_27799717_27803305
H1_mix_00082511	chr8	+	3259	15	FSM	ENSG00000134014.17	ENST00000256398.13	3148	15	-114	3	-42	0	multi-exon	TRUE	canonical	3	158	junction_1	19.6418181543401	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGAGTCATGTGGTTT	2793	False	NA	14	True	AATAAA	-16	NA	28093024	28191150	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_28093234_28097218_28097319_28099827_28099967_28106712_28106784_28107912_28107977_28110369_28110439_28113018_28113174_28129501_28129664_28132277_28132405_28137697_28137892_28155941_28156033_28158567_28158634_28160228_28160457_28161996_28162079_28189648
H1_mix_00082513	chr8	+	13807	8	FSM	ENSG00000104290.11	ENST00000240093.8	13770	8	-37	0	-30	0	multi-exon	TRUE	canonical	3	51	junction_6	41.8495848856597	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGTCATTAGTACCTG	179	False	NA	12	True	AATAAA	-15	NA	28494174	28574258	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_28494344_28499932_28499979_28502669_28503203_28520637_28520835_28527146_28528165_28551602_28551752_28555737_28555972_28562797
H1_mix_00082514	chr8	+	13748	7	FSM	ENSG00000104290.11	ENST00000537916.2	13740	7	-14	6	-14	3	multi-exon	FALSE	canonical	3	51	junction_5	47.5444236711543	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCATTAGTACCTGATT	-37	True	NA	15	True	AATAAA	-18	NA	28494190	28574261	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_28494344_28502669_28503203_28520637_28520835_28527146_28528165_28551602_28551752_28555737_28555972_28562797
H1_mix_00082515	chr8	+	13750	8	NNC	ENSG00000104290.11	novel	13770	8	NA	NA	13	0	intron_retention	FALSE	canonical	2	9	junction_1	54.7666664596453	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGTCATTAGTACCTG	-1	True	NA	12	True	AATAAA	-15	NA	28494226	28574258	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_28494344_28499937_28499979_28502669_28503203_28520637_28520835_28527146_28528165_28551602_28551752_28555737_28555972_28562797
H1_mix_00082517	chr8	+	9130	7	NIC	ENSG00000012232.9	novel	601	4	NA	NA	5892	962	combination_of_known_junctions	TRUE	canonical	3	12	junction_1	113.879566014082	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCAAGTCTTTCTGTGG	NA	False	NA	12	True	AATAAA	-17	NA	28637323	28756561	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_28637430_28713456_28713551_28715584_28718208_28731222_28731351_28737518_28737664_28743085_28743215_28750656
H1_mix_00082518	chr8	+	8225	7	FSM	ENSG00000012232.9	ENST00000220562.9	8221	7	-4	0	-4	0	multi-exon	FALSE	canonical	3	123	junction_1	73.5196496787688	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCAGGTGTGGTGGCAC	-8	True	NA	NA	False	AATACA	-5	NA	28701496	28755599	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_28701660_28713456_28713551_28715584_28718208_28731222_28731351_28737518_28737664_28743085_28743215_28750656
H1_mix_00082519	chr8	+	693	2	NNC	ENSG00000012232.9	novel	803	4	NA	NA	15	-11000	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGGCTCTCAGAAGACT	11	True	NA	2	True	AATAAA	-4	NA	28701515	28702513	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_28701660_28701964
H1_mix_00082523	chr8	+	1731	10	FSM	ENSG00000147421.18	ENST00000524238.3	1731	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	4.96158079150358	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTGATAGGATGCAAGC	NA	False	NA	NA	False	NA	NA	NA	28963862	29051549	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_28963891_28970042_28970520_28980070_28980157_29009071_29009183_29018759_29018914_29045360_29045444_29047357_29047454_29048956_29049049_29049289_29049362_29051017
H1_mix_00082525	chr8	+	4010	1	Intergenic	novelGene_1457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATGAAATATAGAA	NA	False	NA	NA	False	AATAAA	-10	NA	30020532	30024542	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_30020500_30024500
H1_mix_00082529	chr8	+	1389	4	FSM	ENSG00000104660.19	ENST00000523116.5	1389	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	368.372094491426	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCCATATCTTTTCCAGA	29	True	NA	NA	False	NA	NA	NA	30095479	30138348	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_30095529_30101897_30101974_30104299_30104487_30137271
H1_mix_00082531	chr8	+	645	1	FSM	ENSG00000272375.1	ENST00000606555.1	645	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTGCTTCTATAATGAA	NA	False	NA	NA	False	AATAAA	-15	NA	30197403	30198048	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_30197400_30198000
H1_mix_00082534	chr8	+	2874	9	FSM	ENSG00000157110.16	ENST00000397323.9	2874	9	0	0	0	0	multi-exon	FALSE	canonical	3	558	junction_8	368.9835489219	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCATTGCTTGACAAATTC	0	True	NA	25	True	AATAAA	-20	NA	30384540	30572256	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_30385159_30474778_30474857_30477798_30477838_30479314_30479378_30504285_30504437_30544493_30544625_30558886_30558957_30566256_30566361_30570636
H1_mix_00082538	chr8	+	4230	2	FSM	ENSG00000157110.16	ENST00000520916.1	2669	2	-1855	294	-1855	0	multi-exon	FALSE	canonical	3	558	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTTTTCTCGAAGAAAAAA	NA	False	NA	-45	True	NA	NA	NA	30562194	30570700	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_30566361_30570636
H1_mix_00082540	chr8	+	2011	8	FSM	ENSG00000104691.16	ENST00000380154.9	1624	8	-387	0	-377	0	multi-exon	FALSE	canonical	3	12	junction_1	13.2418631157217	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATCTATCTCATCATTT	NA	False	NA	27	True	AATAAA	-38	NA	30743786	30767006	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_30744461_30751395_30751519_30753034_30753106_30754664_30754788_30756764_30756888_30760887_30760930_30763272_30763348_30766226
H1_mix_00082543	chr8	+	629	3	FSM	ENSG00000165392.11	ENST00000520169.1	629	3	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_2	2.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAACTGAAAAATGCTGTGA	NA	False	NA	NA	False	AAAAAG	-18	NA	31119955	31124965	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_31120425_31124521_31124624_31124907
H1_mix_00082545	chr8	+	1736	8	NIC	ENSG00000157168.20	novel	1926	12	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_7	35.3634193563268	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCAGATGTTTTTCTTCA	14	False	NA	8	True	AATAAA	-13	NA	32548240	32743224	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_32548827_32595827_32596006_32605561_32605684_32614513_32614565_32616834_32616886_32727948_32728079_32742007_32742076_32742674
H1_mix_00082546	chr8	+	5931	12	FSM	ENSG00000157168.20	ENST00000356819.7	5931	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	37.0195391785437	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGAGTGTTGCTCAGCA	40	False	NA	NA	False	AATAAA	-19	NA	32548266	32767959	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_32548827_32595827_32596006_32605561_32605684_32614513_32614565_32616834_32616886_32727948_32728079_32742674_32742734_32754371_32754475_32756402_32756530_32759305_32759437_32760199_32760407_32763747
H1_mix_00082548	chr8	+	667	4	FSM	ENSG00000247134.8	ENST00000670899.1	657	4	-10	0	-1	0	multi-exon	FALSE	canonical	0	0	junction_2	112.178429299041	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTTCATACATATATAT	-7	True	NA	22	True	AATAAA	-19	NA	32927966	33044614	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_32928094_32996200_32996356_33041634_33041772_33044366
H1_mix_00082549	chr8	+	725	3	FSM	ENSG00000247134.8	ENST00000666659.1	1314	3	-1	590	-1	0	multi-exon	FALSE	canonical	3	37	junction_2	80	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGGGAGTCTGAATTAG	-7	True	NA	24	True	AATAAA	-21	NA	32927966	33044855	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_32928094_33041634_33041744_33044366
H1_mix_00082550	chr8	+	1343	3	FSM	ENSG00000247134.8	ENST00000659524.1	1397	3	54	0	-1	0	multi-exon	FALSE	canonical	3	197	junction_1	33.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGCCATCACCCAATCCA	-7	True	NA	NA	False	AGTAAA	-1	NA	32927966	33045445	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_32928094_33041634_33041772_33044366
H1_mix_00082551	chr8	+	6190	4	FSM	ENSG00000247134.8	ENST00000666042.1	1477	4	46	-4759	-1	4759	multi-exon	FALSE	canonical	3	37	junction_3	12.3558353285671	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAAGTCTCTGGCAGAGC	-7	True	NA	NA	False	AATAAA	-19	NA	32927966	33050204	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_32928094_32996200_32996317_33041634_33041744_33044366
H1_mix_00082552	chr8	+	868	4	FSM	ENSG00000247134.8	ENST00000685531.1	883	4	15	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	95.030989097709	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGGGAGTCTGAATTAG	-6	True	NA	24	True	AATAAA	-21	NA	32927967	33044855	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_32928094_32996200_32996317_33041634_33041772_33044366
H1_mix_00082557	chr8	+	517	2	FSM	ENSG00000254302.2	ENST00000518217.1	537	2	20	0	20	0	multi-exon	FALSE	canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAAAAAGGGTAAGTGACA	NA	False	NA	NA	False	NA	NA	NA	34174905	34184895	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_34175014_34184486
H1_mix_00082558	chr8	+	540	1	FSM	ENSG00000243181.2	ENST00000477341.2	475	1	-20	-45	-20	45	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	10	False	NA	NA	False	AATAAA	-22	NA	34874138	34874678	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_34874100_34874700
H1_mix_00082559	chr8	+	8970	16	FSM	ENSG00000156687.11	ENST00000287272.6	8662	16	-318	10	-28	0	multi-exon	FALSE	canonical	3	23	junction_8	22.2357070197164	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAGGATACTACATGAGT	-2	True	NA	12	True	AATAAA	-17	NA	35235446	35796540	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_35235888_35549291_35549511_35568097_35568242_35595553_35595658_35683546_35683728_35686544_35686710_35705928_35705962_35722209_35722357_35726151_35726530_35731011_35731097_35748526_35748696_35750581_35750810_35759319_35759470_35766901_35767067_35774298_35774478_35790358
H1_mix_00082560	chr8	+	8969	15	FSM	ENSG00000156687.11	ENST00000420357.5	2966	15	-311	-5692	-21	0	multi-exon	FALSE	canonical	3	35	junction_6	17.4712591978708	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAGGATACTACATGAGT	5	True	NA	12	True	AATAAA	-17	NA	35235453	35796540	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_35235888_35549291_35549511_35568097_35568242_35595553_35595658_35683546_35683728_35686544_35686710_35722209_35722396_35726151_35726530_35731011_35731097_35748526_35748696_35750581_35750810_35759319_35759470_35766901_35767067_35774298_35774478_35790358
H1_mix_00082561	chr8	+	9170	17	FSM	ENSG00000156687.11	ENST00000404895.7	9149	17	-21	0	-21	0	multi-exon	FALSE	canonical	3	21	junction_6	22.8574898829683	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAGGATACTACATGAGT	5	True	NA	12	True	AATAAA	-17	NA	35235453	35796540	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_35235888_35549291_35549511_35568097_35568242_35595553_35595658_35683546_35683728_35684581_35684750_35686544_35686710_35705928_35705962_35722209_35722396_35726151_35726530_35731011_35731097_35748526_35748696_35750581_35750810_35759319_35759470_35766901_35767067_35774298_35774478_35790358
H1_mix_00082564	chr8	+	6742	12	FSM	ENSG00000147475.17	ENST00000519638.3	5387	12	0	-1355	0	1355	multi-exon	FALSE	canonical	3	12	junction_1	4.01855201914552	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGGCATTTGGCTTTTT	2	True	NA	NA	False	TATAAA	-9	NA	37736633	37759777	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_37736679_37737907_37738030_37740364_37740447_37741771_37741819_37744354_37744417_37744570_37744697_37749558_37749633_37749793_37749853_37750394_37750487_37751625_37751716_37753449_37753530_37753914
H1_mix_00082565	chr8	+	5003	12	NIC	ENSG00000147475.17	novel	1602	12	NA	NA	39	-616	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	6.35973906632462	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGAACGTGGCATAATT	14	False	NA	29	True	AATAAA	-35	NA	37736730	37757806	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_37737008_37737907_37738030_37740364_37740447_37741771_37741819_37744354_37744417_37744570_37744697_37749558_37749633_37749793_37749853_37750394_37750487_37751625_37751716_37753449_37753530_37753914
H1_mix_00082570	chr8	+	2507	8	FSM	ENSG00000147471.12	ENST00000328195.8	2507	8	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_4	64.3466377980883	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTGACTGAATA	2	True	NA	17	True	ATTAAA	-18	NA	37762644	37779768	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_37762759_37765525_37765634_37765710_37765747_37766279_37766356_37772754_37772890_37775338_37775482_37775917_37776017_37777972
H1_mix_00082572	chr8	+	827	3	FSM	ENSG00000187840.5	ENST00000338825.5	827	3	0	0	0	0	multi-exon	FALSE	canonical	3	3446	junction_1	4	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGCCCCGTCTGAGCTT	-3	True	NA	22	True	AATAAA	-26	NA	38030533	38060365	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_38030719_38057080_38057261_38059903
H1_mix_00082574	chr8	+	1198	1	FSM	ENSG00000272128.1	ENST00000607091.1	461	1	247	-984	247	984	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTAACCTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	38099717	38100915	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_38099700_38100900
H1_mix_00082576	chr8	+	2685	16	FSM	ENSG00000129691.16	ENST00000428278.6	2678	16	-7	0	-7	0	multi-exon	FALSE	canonical	3	149	junction_1	91.1134579643546	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGACACTTTGCTTCCCTT	254	False	NA	21	True	AATAAA	-18	NA	38105785	38139703	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_38106140_38106377_38106445_38107020_38107167_38110378_38110468_38110738_38110834_38114191_38114288_38114904_38115001_38116649_38116726_38119269_38119364_38120931_38121150_38128290_38128459_38128757_38128952_38133453_38133547_38135667_38135767_38138815_38138876_38138963
H1_mix_00082577	chr8	+	2433	15	FSM	ENSG00000129691.16	ENST00000521652.5	2433	15	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_13	144.642275131104	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGACACTTTGCTTCCCTT	26	False	NA	21	True	AATAAA	-18	NA	38105938	38139703	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_38106140_38106377_38106445_38107020_38107167_38110378_38110468_38110738_38110834_38114191_38114288_38114904_38115001_38116649_38116726_38119269_38119364_38120931_38121150_38128290_38128459_38128757_38128952_38133453_38133547_38138815_38138876_38138963
H1_mix_00082578	chr8	+	3701	2	FSM	ENSG00000129691.16	ENST00000520079.1	2119	2	-1082	-500	749	121	multi-exon	FALSE	canonical	3	571	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCCGGGCGTGGTGGCGG	NA	False	NA	NA	False	AATACA	-5	NA	38136412	38140201	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_38138876_38138963
H1_mix_00082579	chr8	+	4197	5	FSM	ENSG00000156735.11	ENST00000287322.5	4197	5	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_1	25.2091253319111	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTTTTTTTTTTTTTAT	18	True	NA	NA	False	AATAAA	-30	NA	38176854	38213301	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_38177140_38192687_38192796_38207511_38207767_38209012_38209268_38210007
H1_mix_00082580	chr8	+	4081	4	FSM	ENSG00000156735.11	ENST00000432471.6	1943	4	275	-2413	8	0	multi-exon	FALSE	canonical	3	92	junction_1	104.124924969961	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTTTTTTTTTTTTTAT	26	True	NA	NA	False	AATAAA	-30	NA	38176862	38213301	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_38177140_38207511_38207767_38209012_38209268_38210007
H1_mix_00082581	chr8	+	4682	18	FSM	ENSG00000085788.14	ENST00000397166.7	4682	18	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	13.1814591397122	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCTGTCTTTATGTAT	-42	True	NA	86	True	AAGAAA	-17	NA	38231584	38262836	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_38231860_38232986_38233215_38234393_38234585_38237537_38237628_38238088_38238210_38240274_38240365_38242249_38242386_38245741_38245951_38246232_38246301_38247712_38247836_38249707_38249804_38251911_38252029_38252131_38252288_38252721_38252825_38252956_38253128_38253555_38253719_38260039_38260148_38260599
H1_mix_00082585	chr8	+	7680	13	NIC	ENSG00000147526.20	novel	7770	13	NA	NA	-2	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	11.8836956466506	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAGATTTGGGGGTGTGT	-2	True	NA	1	True	AATAAA	-14	NA	38787233	38853023	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_38787744_38788703_38788820_38819521_38820636_38825307_38825369_38827167_38827289_38831124_38831178_38836161_38836288_38838469_38838547_38840223_38840268_38842286_38842448_38843288_38843396_38846698_38846820_38847954
H1_mix_00082587	chr8	+	4112	22	FSM	ENSG00000168615.13	ENST00000487273.7	4112	22	0	0	0	0	multi-exon	FALSE	canonical	1	45	junction_18	20.9863361226984	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGTCCATCGTTTCATT	25	True	NA	NA	False	ATTAAA	-20	NA	38996972	39105261	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_38997161_39007885_39007984_39011657_39011717_39013964_39014044_39016117_39016195_39017218_39017415_39018852_39018919_39021642_39021715_39023155_39023326_39025802_39025885_39026676_39026811_39041945_39042118_39054480_39054574_39055576_39055773_39071297_39071404_39077227_39077412_39082640_39082722_39082967_39083074_39090046_39090189_39091258_39091347_39101862_39101931_39103606
H1_mix_00082588	chr8	+	1818	3	NNC	ENSG00000131203.13	novel	612	5	NA	NA	5	-2208	intron_retention	FALSE	canonical	3	297	junction_2	266	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTATCATGGGTTTTGT	NA	False	NA	NA	False	AATAAA	-26	NA	39902279	39915721	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_39902449_39913888_39914010_39914193
H1_mix_00082590	chr8	+	284	3	NIC	ENSG00000131203.13	novel	612	5	NA	NA	0	-2208	combination_of_known_splicesites	FALSE	canonical	3	82	junction_2	373.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTATCATGGGTTTTGT	18	False	NA	NA	False	AATAAA	-26	NA	39902370	39915721	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_39902449_39913888_39914010_39915636
H1_mix_00082591	chr8	+	336	4	NNC	ENSG00000131203.13	novel	612	5	NA	NA	0	-2208	at_least_one_novel_splicesite	FALSE	canonical	3	197	junction_3	277.378201498724	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTATCATGGGTTTTGT	18	False	NA	NA	False	AATAAA	-26	NA	39902370	39915721	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_39902449_39913888_39914010_39914193_39914246_39915636
H1_mix_00082592	chr8	+	1138	7	FSM	ENSG00000131203.13	ENST00000519154.5	1138	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	168.776973152935	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTCTATCCTCACTTCAAAA	18	False	NA	NA	False	NA	NA	NA	39902370	39922654	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_39902449_39913402_39914010_39917874_39917971_39918087_39918208_39918814_39918934_39920099_39920115_39922551
H1_mix_00082593	chr8	+	1713	12	FSM	ENSG00000131203.13	ENST00000522495.5	1709	12	-4	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	161.988674229134	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGCATAAGATATATT	18	False	NA	123	True	AATAAA	-17	NA	39902370	39928426	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_39902449_39913000_39913149_39913888_39914010_39917874_39917971_39918087_39918208_39918814_39918934_39920099_39920115_39922551_39922652_39923468_39923587_39924720_39924773_39925222_39925372_39927829
H1_mix_00082594	chr8	+	1849	10	FSM	ENSG00000131203.13	ENST00000518237.6	1849	10	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_7	33.8059093380557	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTTGCTTCATTTATA	-1	True	NA	NA	False	AATAAA	-21	NA	39913890	39928790	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_39914010_39917874_39917971_39918087_39918208_39918814_39918934_39920099_39920115_39922551_39922652_39923468_39923587_39924720_39924773_39925222_39925372_39927829
H1_mix_00082596	chr8	+	4477	6	NIC	ENSG00000131203.13	novel	1709	12	NA	NA	-1231	0	intron_retention	FALSE	canonical	3	416	junction_3	24.4589451939367	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGCATAAGATATATT	2762	False	NA	123	True	AATAAA	-17	NA	39916653	39928426	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_39920115_39922551_39922652_39923468_39923587_39924720_39924773_39925222_39925372_39927829
H1_mix_00082598	chr8	+	1459	1	FSM	ENSG00000176907.5	ENST00000315792.5	1829	1	-29	399	-29	-399	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTAGAGTAGTTTTAT	162	False	NA	-6	True	AATAAA	-4	NA	40153452	40154911	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_40153500_40154900
H1_mix_00082601	chr8	+	1903	6	FSM	ENSG00000147533.18	ENST00000405786.2	1903	6	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_4	277.40252342039	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGTTGTCTCTGTGTC	-12	True	NA	NA	False	AATAAA	-10	NA	41490561	41510974	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_41490618_41490832_41490966_41497508_41497662_41505910_41506013_41507053_41507122_41509583
H1_mix_00082602	chr8	+	2119	5	FSM	ENSG00000147533.18	ENST00000357743.9	2099	5	-20	0	0	0	multi-exon	FALSE	canonical	3	669	junction_3	20.4266982158155	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCTGTGTCATATTT	-12	True	NA	NA	False	AATAAA	-16	NA	41490561	41510980	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_41490966_41497508_41497662_41505910_41506013_41507058_41507122_41509583
H1_mix_00082603	chr8	+	500	4	FSM	ENSG00000147536.12	ENST00000520631.5	494	4	-6	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	12.5521135891752	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGATACCTGGAGGGATT	-4	True	NA	NA	False	NA	NA	NA	41529220	41537301	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_41529397_41530183_41530299_41536359_41536447_41537179
H1_mix_00082604	chr8	+	1943	3	FSM	ENSG00000147536.12	ENST00000520710.5	2022	3	0	79	0	-79	multi-exon	FALSE	canonical	3	135	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGTGAGCCAAGATTGT	-4	True	NA	NA	False	NA	NA	NA	41529220	41537957	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_41530299_41536359_41536447_41537179
H1_mix_00082605	chr8	+	3951	8	FSM	ENSG00000147536.12	ENST00000518671.5	1158	8	-50	-2743	-31	115	multi-exon	FALSE	canonical	3	28	junction_1	34.5312635631149	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAAATGATGGCGTCATC	81	False	NA	NA	False	ACTAAA	-18	NA	41529186	41545145	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_41529389_41530183_41530299_41536359_41536447_41537179_41537294_41539677_41539776_41539915_41540005_41541808_41541900_41541990
H1_mix_00082606	chr8	+	3791	8	FSM	ENSG00000147536.12	ENST00000276533.4	3770	8	-21	0	3	0	multi-exon	FALSE	canonical	3	91	junction_5	15.9770243200181	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGTGGAACAGGAAATGA	15	False	NA	22	True	AATAAA	-21	NA	41529239	41545030	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_41529397_41530183_41530299_41536359_41536447_41537179_41537294_41539677_41539776_41539915_41540005_41541808_41541900_41541990
H1_mix_00082607	chr8	+	441	3	NNC	ENSG00000147536.12	novel	375	3	NA	NA	5	-5143	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	49.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTCTATGTCCTGGAGTT	-2	True	NA	6	True	AATAAA	-20	NA	41529253	41531309	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_41529397_41530183_41530299_41531126
H1_mix_00082608	chr8	+	4273	2	FSM	ENSG00000147536.12	ENST00000518430.1	515	2	-1091	-2667	-1091	46	multi-exon	FALSE	canonical	3	109	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGGTTCATGGTGAGTG	NA	False	NA	68	True	NA	NA	NA	41540712	41545076	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_41541900_41541990
H1_mix_00082611	chr8	+	1101	2	FSM	ENSG00000158669.11	ENST00000520223.1	1101	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATAGTGCCAGCCATTTT	171	False	NA	NA	False	NA	NA	NA	41578414	41599226	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_41578581_41598291
H1_mix_00082614	chr8	+	3501	9	FSM	ENSG00000070718.12	ENST00000396926.8	3494	9	-7	0	-7	0	multi-exon	FALSE	canonical	3	68	junction_1	11.7046999107196	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTATGTCCTAAGTGGTTT	-1	True	NA	22	True	AATAAA	-18	NA	42153055	42171183	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_42153106_42154615_42154961_42157940_42158113_42162280_42162419_42165070_42165157_42165426_42165561_42167163_42167372_42167665_42167811_42168960
H1_mix_00082616	chr8	+	1094	5	FSM	ENSG00000070718.12	ENST00000517922.5	1094	5	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_4	8.67107259801231	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAAGAGAATCTGAATAG	1559	False	NA	NA	False	AATAAA	-21	NA	42154615	42165779	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_42154961_42157940_42158113_42162280_42162419_42165070_42165157_42165426
H1_mix_00082619	chr8	+	5582	21	ISM	ENSG00000104365.16	ENST00000520810.6	3938	22	32	23	0	0	intron_retention	FALSE	canonical	3	59	junction_15	13.4999074070899	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTTTGGAAACCCTGGT	16	True	NA	1	True	AATAAA	-3	NA	42271333	42332437	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_42271470_42272082_42272206_42288633_42288729_42290155_42290274_42293442_42293513_42305186_42305276_42306342_42306433_42308900_42309026_42314321_42314430_42316209_42316340_42316709_42316905_42317656_42317772_42318551_42318676_42319269_42319422_42319584_42319647_42320734_42320845_42321895_42321946_42322053_42322154_42322346_42322495_42325969_42326098_42329123
H1_mix_00082620	chr8	+	5021	19	FSM	ENSG00000104365.16	ENST00000520201.5	5002	19	-19	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	20.267653484747	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAATGACAGTGGGAAATA	14	False	NA	19	True	AATAAA	-21	NA	42271369	42332455	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_42271470_42272082_42272206_42290155_42290274_42293442_42293513_42305186_42305276_42306342_42306433_42308900_42309026_42314321_42314430_42316209_42316340_42316709_42316905_42317656_42317772_42318551_42318676_42319269_42320845_42321895_42321946_42322053_42322154_42322346_42322495_42325969_42326098_42329123_42329215_42330913
H1_mix_00082622	chr8	+	1309	14	FSM	ENSG00000070501.12	ENST00000265421.9	1290	14	-19	0	-7	0	multi-exon	FALSE	canonical	3	101	junction_1	23.3238075793812	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGATGATGATCTTAT	8	False	NA	16	True	AATAAA	-17	NA	42338474	42371808	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_42338686_42339011_42339070_42344952_42345020_42349015_42349091_42350006_42350066_42352518_42352569_42355515_42355568_42357168_42357224_42357319_42357393_42361294_42361366_42362611_42362699_42369270_42369336_42369848_42369989_42371562
H1_mix_00082623	chr8	+	1188	13	NIC	ENSG00000070501.12	novel	1290	14	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_10	42.6389884182696	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGATGATGATCTTAT	15	False	NA	16	True	AATAAA	-17	NA	42338508	42371808	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_42338686_42339011_42339070_42344952_42345020_42349015_42349091_42350006_42350066_42352518_42352569_42355515_42355568_42357168_42357224_42357319_42357393_42361294_42361366_42369270_42369336_42369848_42369989_42371562
H1_mix_00082624	chr8	+	1269	13	NIC	ENSG00000070501.12	novel	1290	14	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	92	junction_1	23.3249985113731	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGATGATGATCTTAT	NA	False	NA	16	True	AATAAA	-17	NA	42338456	42371808	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_42338686_42344952_42345020_42349015_42349091_42350006_42350066_42352518_42352569_42355515_42355568_42357168_42357224_42357319_42357393_42361294_42361366_42362611_42362699_42369270_42369336_42369848_42369989_42371562
H1_mix_00082625	chr8	+	5745	3	FSM	ENSG00000070501.12	ENST00000521492.1	786	3	-5002	43	2636	0	multi-exon	FALSE	canonical	3	162	junction_2	6	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGCTTGCAATGTAGT	4389	False	NA	-27	True	TTTAAA	-19	NA	42363933	42371765	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_42369336_42369848_42369989_42371562
H1_mix_00082628	chr8	+	1418	10	FSM	ENSG00000078668.14	ENST00000022615.9	1418	10	0	0	0	0	multi-exon	TRUE	canonical	3	1159	junction_5	72.4161498937364	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATTTGTTTTAAGAAGC	13	True	NA	66	True	NA	NA	NA	42391879	42405937	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_42391929_42393844_42393885_42394209_42394279_42395083_42395134_42398711_42398865_42399650_42399704_42401787_42402016_42403310_42403462_42404866_42404925_42405370
H1_mix_00082630	chr8	+	793	4	FSM	ENSG00000176209.12	ENST00000414154.6	793	4	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_1	99.3724755095136	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGTTTCATTGTATTC	-2	True	NA	11	True	AATAAA	-27	NA	42541612	42552980	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_42541706_42546468_42546607_42548655_42548781_42552543
H1_mix_00082633	chr8	+	1338	4	FSM	ENSG00000176209.12	ENST00000417410.7	3704	4	0	2366	0	0	multi-exon	FALSE	canonical	3	81	junction_1	236.195305250173	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGATGGTGACTTGACCTT	-30	True	NA	NA	False	NA	NA	NA	42541584	42552829	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_42542374_42546468_42546607_42548655_42548781_42552543
H1_mix_00082635	chr8	+	14348	22	FSM	ENSG00000168172.9	ENST00000307602.9	14348	22	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_16	15.2593601622859	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCCTAGATTTCTTTTT	17	True	NA	108	True	AATAAA	-15	NA	42896977	43030535	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_42897189_42906172_42906259_42925556_42925630_42930121_42930173_42943312_42943446_42950387_42950456_42957093_42957157_42959230_42959315_42964310_42964475_42966472_42966614_42968012_42968215_42973288_42973400_42974106_42974195_42982626_42982697_42986654_42986796_42997549_42997638_43002106_43002142_43007846_43007930_43010304_43010406_43013050_43013156_43013328_43013401_43018357
H1_mix_00082636	chr8	+	5202	8	FSM	ENSG00000168522.13	ENST00000526755.5	4676	8	-534	8	-534	0	multi-exon	FALSE	canonical	3	33	junction_1	254.326481483296	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAATGCCATAGAAGT	NA	False	NA	27	True	AATAAA	-16	NA	43055773	43085780	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_43056547_43064100_43064216_43069554_43069660_43072180_43072308_43077215_43080442_43083117_43083181_43084709_43084882_43085159
H1_mix_00082638	chr8	+	745	5	FSM	ENSG00000168522.13	ENST00000524546.5	750	5	0	5	0	-5	multi-exon	FALSE	canonical	3	4	junction_4	273.547413623306	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTACCATTGTAGCCTGTT	27	False	NA	7	True	AATAAA	-30	NA	43056354	43070348	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_43056547_43059091_43059178_43064100_43064216_43069554_43069660_43070101
H1_mix_00082641	chr8	+	6758	3	FSM	ENSG00000168522.13	ENST00000525099.1	7327	3	569	0	569	0	multi-exon	FALSE	canonical	3	632	junction_1	3.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAATGCCATAGAAGT	NA	False	NA	27	True	AATAAA	-16	NA	43077215	43085780	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_43083181_43084709_43084882_43085159
H1_mix_00082643	chr8	+	11174	5	FSM	ENSG00000185900.11	ENST00000331373.10	1868	5	-10	-9296	1	1550	multi-exon	FALSE	canonical	3	63	junction_4	11.247221879202	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATACTGACTTTGAATTC	-7	True	NA	9	True	AATAAA	-16	NA	43093504	43132730	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_43093564_43097523_43097616_43102504_43102601_43103527_43103831_43122106
H1_mix_00082648	chr8	+	2090	11	FSM	ENSG00000164808.17	ENST00000519401.5	2090	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_10	42.8005841081638	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCAGTTCACTACTTTT	NA	False	NA	15	True	AATAAA	-16	NA	47440400	47735916	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_47440543_47595810_47596007_47598945_47599197_47673800_47673942_47700402_47700491_47701720_47701865_47701955_47702016_47712661_47712873_47713488_47713642_47727199_47727294_47735306
H1_mix_00082650	chr8	+	4067	17	FSM	ENSG00000104738.18	ENST00000649973.1	4062	17	-5	0	0	0	multi-exon	FALSE	canonical	3	1235	junction_1	128.460110540198	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATGAGTTGGGCCTTTT	-14	True	NA	21	True	AATAAA	-21	NA	47960935	47978160	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_47961015_47961130_47961215_47961515_47961681_47962052_47962217_47962304_47962407_47962763_47962860_47962944_47963041_47964573_47964713_47966186_47966408_47967364_47967486_47969797_47970058_47970510_47970877_47971340_47971469_47972856_47973065_47974733_47974963_47975714_47975849_47976685
H1_mix_00082657	chr8	+	4358	4	FSM	ENSG00000169139.12	ENST00000523111.7	4342	4	-16	0	0	0	multi-exon	FALSE	canonical	3	3458	junction_1	208.90348648758	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTGAGTTACATGATTGA	-14	True	NA	19	True	AATAAA	-19	NA	48008414	48064708	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_48008471_48043032_48043182_48049852_48049979_48060681
H1_mix_00082668	chr8	+	5872	13	FSM	ENSG00000254087.8	ENST00000519728.6	5872	13	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_2	22.1376690030565	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTAGAATCTCCCTGA	3	True	NA	NA	False	AATAAA	-15	NA	55879834	56014169	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_55880104_55941854_55941992_55946447_55946494_55947617_55947724_55950458_55950558_55950680_55950785_55951965_55952116_55953831_55953985_55966714_55966898_55969716_55969794_55998345_55998500_55999417_55999550_56009907
H1_mix_00082670	chr8	+	1707	5	FSM	ENSG00000170791.18	ENST00000303759.3	1684	5	-23	0	-23	0	multi-exon	FALSE	canonical	3	199	junction_2	209.737186736163	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCTTTTGATTTGTAT	NA	False	NA	13	True	AATAAA	-16	NA	56211732	56218615	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_56211838_56212761_56212910_56214597_56214668_56216432_56216532_56217330
H1_mix_00082672	chr8	+	727	5	FSM	ENSG00000170791.18	ENST00000521524.5	703	5	-24	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	91.8517827807387	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGAGCTTTTCCACTGGGT	-3	True	NA	NA	False	NA	NA	NA	56211785	56217689	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_56211838_56212761_56212890_56214597_56214668_56216388_56216507_56217330
H1_mix_00082673	chr8	+	1700	4	FSM	ENSG00000170791.18	ENST00000355315.8	1697	4	-3	0	0	0	multi-exon	FALSE	canonical	3	407	junction_1	117.423260992966	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACTCTTGTTGAGTCTT	-3	True	NA	NA	False	NA	NA	NA	56211785	56218809	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_56211838_56214597_56214668_56216432_56216532_56217330
H1_mix_00082674	chr8	+	1817	5	FSM	ENSG00000170791.18	ENST00000523975.5	1805	5	-12	0	0	0	multi-exon	FALSE	canonical	3	161	junction_2	220.813694095271	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTCCTGATGCCACTCT	-3	True	NA	NA	False	NA	NA	NA	56211785	56218798	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_56211838_56212761_56212890_56214597_56214668_56216432_56216532_56217330
H1_mix_00082682	chr8	+	781	6	ISM	ENSG00000215114.10	ENST00000523409.5	1225	9	6	12578	6	0	5prime_fragment	FALSE	canonical	3	73	junction_5	71.4769893042509	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAAAGTGGAGTTATTTC	26	True	NA	NA	False	AATAAA	-27	NA	58411386	58435106	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_58411470_58416849_58416954_58430518_58430670_58433159_58433244_58434394_58434505_58434857
H1_mix_00082686	chr8	+	2080	9	FSM	ENSG00000137575.12	ENST00000260130.9	2073	9	-7	0	0	0	multi-exon	FALSE	canonical	3	815	junction_4	95.6607776207156	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACTGCATCATTTGCTT	4	True	NA	27	True	AATAAA	-19	NA	58553253	58582858	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_58553304_58565018_58565085_58570886_58570966_58572204_58572315_58575899_58576062_58578032_58578209_58579622_58579795_58580516_58580609_58581685
H1_mix_00082687	chr8	+	3589	10	FSM	ENSG00000137575.12	ENST00000523483.5	3589	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	457.733816659399	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACTGCATCATTTGCTT	4	True	NA	27	True	AATAAA	-19	NA	58553253	58582858	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_58553304_58560283_58561796_58565018_58565085_58570886_58570966_58572204_58572315_58575902_58576062_58578032_58578209_58579622_58579795_58580516_58580609_58581685
H1_mix_00082689	chr8	+	1786	2	FSM	ENSG00000167912.7	ENST00000523683.1	692	2	221	-1315	39	-1	multi-exon	FALSE	canonical	2	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTGATGTCTGTTTGAT	40	False	NA	1	True	AATAAA	-16	NA	59119260	59121346	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_59119286_59119585
H1_mix_00082690	chr8	+	1155	2	FSM	ENSG00000167912.7	ENST00000662685.2	1227	2	18	54	2	-21	multi-exon	FALSE	canonical	2	9	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTTATTATATCAAAACT	-17	True	NA	49	True	ATTAAA	-34	NA	59119875	59121294	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_59120072_59120335
H1_mix_00082694	chr8	+	11616	38	FSM	ENSG00000171316.12	ENST00000423902.7	11606	38	-10	0	-10	0	multi-exon	TRUE	canonical	3	58	junction_14	32.4600333005063	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTTTGTAGTATTGGAAA	14	False	NA	23	True	AATAAA	-30	NA	60678729	60868028	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_60679083_60741258_60743098_60780999_60781431_60794985_60795128_60800387_60800526_60801527_60801594_60808216_60808273_60816386_60816502_60820006_60820091_60821789_60821928_60822023_60822146_60822502_60822747_60823839_60824017_60828662_60828807_60830321_60830578_60836072_60836284_60836816_60837013_60837667_60837836_60838075_60838256_60841643_60841755_60841846_60842053_60844863_60845064_60845249_60845410_60848514_60848605_60849050_60849155_60850492_60850623_60851031_60851105_60851261_60851320_60852018_60852248_60852497_60852707_60852828_60853501_60854362_60854524_60855974_60856203_60856444_60856889_60860903_60861126_60862195_60862337_60862547_60862653_60865015
H1_mix_00082701	chr8	+	2245	5	NNC	ENSG00000185728.17	novel	5193	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_1	173.994791588714	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTTGTAATTATGCAT	277	False	NA	NA	False	NA	NA	NA	63168552	63209955	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_63168815_63169386_63169412_63175330_63175417_63186146_63187746_63209682
H1_mix_00082703	chr8	+	5095	5	FSM	ENSG00000185728.17	ENST00000539294.6	5095	5	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_2	37.6397396377818	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTGTTCTTTCCATTT	-5	True	NA	12	True	AATAAA	-14	NA	63168620	63212786	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_63168902_63169386_63169412_63175330_63175417_63186146_63187746_63209682
H1_mix_00082705	chr8	+	6143	2	ISM	ENSG00000185728.17	ENST00000615676.1	5092	6	16048	4	-2827	-3	3prime_fragment	FALSE	canonical	3	480	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATATCTGTGTTCTTTCC	2441	False	NA	8	True	AATAAA	-10	NA	63184702	63212782	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_63187746_63209682
H1_mix_00082713	chr8	+	2500	6	FSM	ENSG00000066855.16	ENST00000458689.2	2500	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	72.0916083882167	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATAGTGCTTCCATTTTT	4	False	NA	15	True	AATAAA	-28	NA	65669872	65710561	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_65670019_65693643_65693760_65704693_65704930_65707009_65707257_65707842_65708012_65708975
H1_mix_00082725	chr8	+	4197	17	FSM	ENSG00000104205.16	ENST00000396596.2	4190	17	-7	0	-7	0	multi-exon	FALSE	canonical	3	57	junction_4	9.06831709855803	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAATGTCTGTCATTATT	NA	False	NA	4	True	AATAAA	-16	NA	66775173	66862020	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_66775320_66793615_66793833_66798541_66798626_66804374_66804448_66813852_66813929_66822371_66822460_66828653_66828704_66831253_66831312_66835762_66835847_66835942_66836075_66840002_66840116_66840210_66840248_66841023_66841111_66843451_66843548_66847192_66847349_66850830_66850921_66859410
H1_mix_00082739	chr8	+	5296	37	ISM	ENSG00000046889.19	ENST00000288368.5	10824	40	-238	44402	-238	0	5prime_fragment	TRUE	canonical	3	55	junction_20	13.2395719504861	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCAGGTGTATTTGGAAT	-7	True	NA	22	True	ATTAAA	-17	NA	67951807	68192630	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_67952536_68017845_68017918_68019548_68019672_68022035_68022141_68027221_68027324_68030496_68030659_68038158_68038293_68044486_68044591_68053096_68053247_68055829_68055975_68060678_68060780_68069032_68069137_68069834_68069885_68072494_68072571_68077396_68077470_68080442_68080586_68080745_68080839_68083239_68083389_68087723_68087810_68090578_68090716_68093604_68093723_68097016_68097202_68099681_68099844_68108108_68108332_68109415_68109624_68115752_68115933_68118549_68118645_68119431_68119515_68120195_68120287_68120920_68121050_68127377_68127420_68134058_68134277_68138414_68138518_68146208_68146353_68157321_68157437_68191721_68191789_68192334
H1_mix_00082740	chr8	+	566	5	FSM	ENSG00000046889.19	ENST00000520235.1	566	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	41.6833300013327	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGAAACTGTCATTTACAT	NA	False	NA	NA	False	AATAAA	-10	NA	68157406	68220350	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_68157437_68191721_68191789_68192334_68192526_68217615_68217719_68220175
H1_mix_00082748	chr8	+	395	3	ISM	ENSG00000235531.11	ENST00000519068.3	568	6	85	9526	85	53	5prime_fragment	FALSE	canonical	1	2	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTGAAGAAAAACAGACAC	5042	False	NA	NA	False	NA	NA	NA	71963007	72052766	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_71963049_71965408_71965535_72052538
H1_mix_00082749	chr8	+	4052	4	FSM	ENSG00000147601.15	ENST00000678358.1	4052	4	0	0	0	0	multi-exon	FALSE	canonical	3	8043	junction_1	360.674676436012	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTGAGATTGCGCCACT	-15	True	NA	NA	False	NA	NA	NA	73008855	73025699	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215
H1_mix_00082750	chr8	+	2723	10	FSM	ENSG00000147601.15	ENST00000678860.1	2715	10	-8	0	0	0	multi-exon	FALSE	canonical	3	228	junction_8	3285.44899688172	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATACATACCTTACTAAACA	-15	True	NA	-22	True	AATAAA	-7	NA	73008855	73047479	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026939_73027053_73032041_73032134_73038705_73038796_73039115_73039220_73045960
H1_mix_00082752	chr8	+	2941	10	FSM	ENSG00000147601.15	ENST00000678997.1	2933	10	-8	0	0	0	multi-exon	FALSE	canonical	3	142	junction_2	3317.8160152593	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATCCTATATATAAACAGAA	-15	True	NA	-13	True	NA	NA	NA	73008855	73047711	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_73009206_73012855_73012932_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026939_73027053_73032041_73032134_73039115_73039220_73045960
H1_mix_00082755	chr8	+	4242	4	FSM	ENSG00000147601.15	ENST00000678912.1	4242	4	0	0	0	0	multi-exon	FALSE	canonical	2	71	junction_1	3823.83498597939	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATTGTATTTCCTATTAA	6	False	NA	-71	True	CATAAA	-27	NA	73028602	73047653	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_73030956_73032041_73032134_73039115_73039220_73045960
H1_mix_00082756	chr8	+	3300	3	FSM	ENSG00000147601.15	ENST00000518961.1	3300	3	0	0	0	0	multi-exon	FALSE	canonical	3	8030	junction_1	148.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGAAAATAGTAATACCTG	1356	False	NA	NA	False	AAGAAA	-5	NA	73029952	73046975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_73032134_73039115_73039220_73045960
H1_mix_00082762	chr8	+	2156	3	FSM	ENSG00000244295.2_ENSG00000175606.11	ENST00000517439.1	617	3	-49	-1490	-37	73	multi-exon	FALSE	canonical	3	10	junction_2	184	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGAGATTGACTCTTGC	NA	False	NA	81	True	NA	NA	NA	73976157	73982856	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_73976492_73978755_73978876_73981154
H1_mix_00082763	chr8	+	2032	3	FSM	ENSG00000175606.11	ENST00000312184.6	2032	3	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_2	13	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTGTAAAATTGCTGTC	-22	True	NA	8	True	ATTAAA	-14	NA	73976194	73982783	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_73976492_73978755_73978862_73981154
H1_mix_00082766	chr8	+	3648	6	FSM	ENSG00000104381.14	ENST00000220822.12	3645	6	-3	0	0	0	multi-exon	FALSE	canonical	3	138	junction_2	33.6428298453028	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTCACTTTGTAATCTTT	-27	True	NA	13	True	AATAAA	-36	NA	74350399	74366876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_74350579_74351273_74351467_74360136_74360311_74361883_74361979_74362938_74363054_74363984
H1_mix_00082771	chr8	+	4293	15	FSM	ENSG00000121005.9	ENST00000262207.9	4297	15	0	4	0	-4	multi-exon	FALSE	canonical	3	196	junction_5	38.0053701898206	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTTGACCATTGTAATT	0	True	NA	26	True	ATTAAA	-23	NA	74984504	75034554	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_74984921_74985925_74986246_75012432_75012552_75012889_75013023_75013986_75014103_75014811_75014913_75016564_75016706_75016880_75016942_75017046_75017114_75017319_75017451_75019869_75019914_75020006_75020080_75025545_75025622_75029386_75029518_75032190
H1_mix_00082773	chr8	+	1784	3	FSM	ENSG00000171033.13	ENST00000352966.9	1736	3	-48	0	-33	0	multi-exon	FALSE	canonical	3	103	junction_1	107	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAGTGGTAATAAATAAGG	-31	True	NA	-17	True	NA	NA	NA	78516306	78603185	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_78516469_78598357_78598536_78601741
H1_mix_00082776	chr8	+	1408	3	FSM	ENSG00000104427.12	ENST00000521873.1	981	3	0	-427	0	427	multi-exon	FALSE	canonical	3	140	junction_2	3	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTTTACTGTGAACAT	11	True	NA	NA	False	AATAAA	-37	NA	78666088	78679817	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_78666165_78675786_78675864_78678562
H1_mix_00082784	chr8	+	2506	1	FSM	ENSG00000280193.1	ENST00000624416.1	2327	1	26	-205	26	205	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCACACCTGTCCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	81696393	81698899	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_81696400_81698900
H1_mix_00082788	chr8	+	3978	18	NIC	ENSG00000133739.16	novel	3726	19	NA	NA	0	458	combination_of_known_junctions	FALSE	canonical	3	34	junction_5	16.7994480054315	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGGTGCAGTGGCTTAT	18	True	NA	NA	False	TTTAAA	-12	NA	85107237	85146538	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_85107400_85110114_85110181_85112931_85113100_85115099_85115276_85115374_85115585_85123412_85123607_85124791_85124940_85126688_85126838_85129174_85129380_85129918_85130059_85131759_85131962_85134846_85135033_85135788_85135964_85137463_85137628_85138034_85138244_85138337_85138476_85141381_85141518_85145388
H1_mix_00082790	chr8	+	2003	8	FSM	ENSG00000133740.11	ENST00000418930.6	1890	8	0	-113	0	113	multi-exon	FALSE	canonical	3	263	junction_6	86.6927485610026	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAAAGGAGAAAGTATTAT	31	False	NA	NA	False	NA	NA	NA	85177224	85214631	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_85177655_85202146_85202257_85203093_85203256_85206176_85206221_85207424_85207490_85209141_85209410_85212159_85212205_85213752
H1_mix_00082796	chr8	+	835	8	FSM	ENSG00000085719.13	ENST00000621783.4	817	8	-18	0	-16	0	multi-exon	FALSE	canonical	3	13	junction_1	89.4392964814798	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTGAAAGAAGCCTCCAG	-31	True	NA	NA	False	NA	NA	NA	86514418	86544808	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_86514542_86528535_86528678_86528944_86529125_86531154_86531230_86532508_86532581_86537562_86537647_86540244_86540335_86544739
H1_mix_00082797	chr8	+	4873	17	FSM	ENSG00000085719.13	ENST00000517490.6	4857	17	-16	0	-16	0	multi-exon	FALSE	canonical	3	213	junction_4	22.1295016606791	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGACTTCATATTTTACT	-31	True	NA	32	True	AATAAA	-20	NA	86514418	86561498	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_86514542_86515461_86515500_86528535_86528678_86528944_86529125_86531154_86531230_86532508_86532581_86537562_86537647_86540244_86540335_86544739_86544839_86546594_86546682_86547710_86547771_86548300_86548435_86551045_86551101_86551182_86551235_86554850_86554985_86556101_86556339_86558287
H1_mix_00082799	chr8	+	583	3	FSM	ENSG00000104312.8	ENST00000517696.1	572	3	-11	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTTACACAAAGCTAGAT	-17	True	NA	NA	False	AAGAAA	-22	NA	89757805	89762858	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_89758234_89759321_89759447_89762828
H1_mix_00082800	chr8	+	1916	10	FSM	ENSG00000104312.8	ENST00000522965.1	1916	10	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	96.6825018958421	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCAATTTTTATGTCTCT	-17	True	NA	19	True	AGTAAA	-21	NA	89757805	89790608	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_89758234_89765340_89765497_89769771_89769930_89771740_89771791_89772666_89772829_89780074_89780161_89784049_89784140_89786592_89786687_89789320_89789483_89790078
H1_mix_00082806	chr8	+	1017	9	FSM	ENSG00000104325.7	ENST00000517597.5	897	9	-93	-27	-22	0	multi-exon	FALSE	canonical	3	26	junction_1	124.276908555049	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATTCATTGAATATGTA	16	True	NA	NA	False	AATAAA	-13	NA	90001382	90051999	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_90001562_90018908_90018967_90019085_90019173_90020908_90021057_90036840_90036941_90042727_90042801_90044848_90044996_90051676_90051740_90051837
H1_mix_00082807	chr8	+	1785	12	FSM	ENSG00000104325.7	ENST00000522161.5	1766	12	-19	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	171.437914936241	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATTCATTGAATATGTA	-11	True	NA	NA	False	AATAAA	-13	NA	90001457	90051999	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_90001562_90005447_90005846_90006035_90006278_90017123_90017327_90018908_90018967_90019085_90019173_90020908_90021057_90036840_90036941_90042727_90042801_90044848_90044996_90051676_90051740_90051837
H1_mix_00082812	chr8	+	1512	4	FSM	ENSG00000188343.14	ENST00000522324.5	1072	4	-145	-295	-102	295	multi-exon	FALSE	canonical	3	284	junction_3	47.5137407026173	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAGGCAAGAGAATCGCT	1823	False	NA	NA	False	NA	NA	NA	93700404	93705847	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_93700674_93701223_93701459_93703619_93703689_93704908
H1_mix_00082813	chr8	+	3636	8	NIC	ENSG00000188343.14	novel	1179	9	NA	NA	0	-544	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	129.515265824661	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTCTGTCTCTACAAATAA	-15	True	NA	NA	False	NA	NA	NA	93700561	93730983	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_93700674_93701223_93701459_93703619_93703689_93704908_93705011_93709770_93709876_93718674_93718789_93726393_93726514_93728204
H1_mix_00082814	chr8	+	1191	9	FSM	ENSG00000188343.14	ENST00000359421.9	1179	9	-12	0	0	0	multi-exon	TRUE	canonical	1	2	junction_4	153.831431687416	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGGCTTTAAAAAATATT	-27	True	NA	NA	False	ATTAAA	-23	NA	93700549	93728446	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_93700674_93701223_93701459_93703619_93703689_93704908_93705011_93707201_93707282_93709770_93709876_93718674_93718789_93726393_93726514_93728204
H1_mix_00082815	chr8	+	874	5	ISM	ENSG00000188343.14	ENST00000452913.6	1284	10	-102	20247	-102	-1570	5prime_fragment	FALSE	canonical	3	66	junction_4	124.079359685646	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATATAATATTAGCACAAGA	1823	False	NA	NA	False	ATTAAA	-26	NA	93700404	93708209	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_93700674_93701223_93701459_93703619_93703689_93704908_93705011_93708010
H1_mix_00082820	chr8	+	4674	28	FSM	ENSG00000164953.17	ENST00000453321.8	4678	28	-3	7	0	-7	multi-exon	FALSE	canonical	3	60	junction_18	11.8269414139868	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATACACTGTCGACTCC	-17	True	NA	65	True	CATAAA	-14	NA	93754890	93818114	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_93755138_93755777_93755867_93758482_93758577_93763841_93763942_93765405_93765476_93765571_93765647_93772588_93772652_93780592_93780748_93780873_93780983_93781657_93781745_93782394_93782461_93785221_93785379_93786222_93786347_93787843_93787950_93791262_93791320_93793197_93793297_93795408_93795508_93795900_93795988_93797133_93797234_93797330_93797471_93799617_93799759_93803603_93803685_93804761_93804879_93808839_93808957_93809056_93809162_93809784_93809888_93815304_93815448_93816371
H1_mix_00082824	chr8	+	4248	3	FSM	ENSG00000164951.16	ENST00000520728.5	2554	3	-14	-1680	-3	0	multi-exon	FALSE	canonical	3	28	junction_1	3.5	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGTGTTGGTTTTTAA	9	True	NA	23	True	ATTAAA	-22	NA	93916919	93926068	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_93917080_93917910_93917946_93922015
H1_mix_00082827	chr8	+	3768	16	FSM	ENSG00000104413.18	ENST00000433389.8	3768	16	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_14	116.081503933898	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGATTTTTTTTTTG	7	True	NA	20	True	AATAAA	-21	NA	94641173	94707466	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674507_94678202_94678372_94692676_94692828_94696851_94696962_94705924
H1_mix_00082828	chr8	+	3756	16	FSM	ENSG00000104413.18	ENST00000358397.9	3756	16	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_12	169.183082947308	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGATTTTTTTTTTG	7	True	NA	20	True	AATAAA	-21	NA	94641173	94707466	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674495_94678202_94678372_94692676_94692828_94696851_94696962_94705924
H1_mix_00082829	chr8	+	3607	14	FSM	ENSG00000104413.18	ENST00000646773.1	3274	14	-125	-208	0	0	multi-exon	FALSE	canonical	3	177	junction_13	120.910891928652	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGATTTTTTTTTTG	69	False	NA	20	True	AATAAA	-21	NA	94641073	94707466	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674507_94678202_94678372_94705924
H1_mix_00082830	chr8	+	3470	14	FSM	ENSG00000104413.18	ENST00000454170.7	3465	14	-5	0	0	0	multi-exon	FALSE	canonical	3	38	junction_12	182.704631163309	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGATTTTTTTTTTG	32	False	NA	20	True	AATAAA	-21	NA	94641198	94707466	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674495_94678202_94678372_94705924
H1_mix_00082831	chr8	+	3590	15	NIC	ENSG00000104413.18	novel	3768	16	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	141	junction_13	136.522723682296	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGATTTTTTTTTTG	34	False	NA	20	True	AATAAA	-21	NA	94641200	94707466	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674507_94678202_94678372_94696851_94696962_94705924
H1_mix_00082832	chr8	+	3630	15	NIC	ENSG00000104413.18	novel	3768	16	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	92	junction_14	146.118923469612	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGATTTTTTTTTTG	35	False	NA	20	True	AATAAA	-21	NA	94641201	94707466	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674507_94678202_94678372_94692676_94692828_94705924
H1_mix_00082835	chr8	+	6197	19	FSM	ENSG00000156162.16	ENST00000414645.6	6197	19	0	0	0	0	multi-exon	TRUE	canonical	3	62	junction_7	17.4540843852777	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCTGAGTTTAGCATAAA	0	True	NA	10	True	AATAAA	-19	NA	94719899	94793836	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_94720015_94726330_94726442_94734629_94734755_94738368_94738460_94739412_94739535_94739644_94739791_94756035_94756160_94761699_94761835_94765182_94765315_94765710_94765810_94766611_94766686_94768394_94768554_94770451_94770572_94777665_94777787_94780358_94780416_94781083_94781167_94783669_94783803_94787893_94788053_94789745
H1_mix_00082836	chr8	+	1303	7	NIC	ENSG00000156162.16	novel	6197	19	NA	NA	4	-3	combination_of_known_junctions	FALSE	canonical	3	25	junction_6	33.5111921602321	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTATTCGTGTTCTTAAT	4	True	NA	108	True	ATTAAA	-18	NA	94719903	94745081	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_94720015_94726330_94726442_94734629_94734755_94738368_94738460_94739412_94739535_94739644_94739791_94744484
H1_mix_00082845	chr8	+	948	9	FSM	ENSG00000156170.13	ENST00000454358.6	946	9	-2	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	57.8509669322821	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATTTCATGGCATTGA	7	True	NA	-3	True	AAAACA	-6	NA	95025065	95057936	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_95025206_95031994_95032099_95035453_95035577_95041569_95041627_95045544_95045648_95046993_95047128_95048456_95048559_95052173_95052231_95057808
H1_mix_00082846	chr8	+	1264	11	NIC	ENSG00000156170.13	novel	1196	10	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	11	junction_4	98.2067207476148	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGCATTGATGTTAATT	7	True	NA	5	True	ATTAAA	-7	NA	95025065	95057944	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_95025206_95031994_95032099_95034007_95034123_95035453_95035577_95036301_95036495_95041569_95041627_95045544_95045648_95046993_95047128_95048456_95048559_95052173_95052231_95057808
H1_mix_00082848	chr8	+	4894	13	FSM	ENSG00000156471.13	ENST00000517309.6	4990	13	0	96	0	-96	multi-exon	FALSE	canonical	3	263	junction_6	30.6113631770223	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAAGAAATGCTTGAACC	-13	True	NA	NA	False	NA	NA	NA	96261901	96336899	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_96262220_96273298_96273391_96284108_96284154_96287021_96287147_96295097_96295257_96299693_96299846_96304039_96304182_96306443_96306557_96309556_96309623_96320245_96320346_96330212_96330282_96331025_96331096_96333456
H1_mix_00082853	chr8	+	7662	12	FSM	ENSG00000147649.10	ENST00000336273.8	7662	12	0	0	0	0	multi-exon	TRUE	canonical	3	272	junction_6	27.6940188070628	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTGCTCAAGAAATATAAC	-24	True	NA	20	True	AATAAA	-23	NA	97644183	97730260	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_97644888_97661071_97661174_97686667_97686753_97687428_97687606_97689037_97689104_97690951_97691189_97699753_97699853_97706625_97706751_97713661_97713770_97719048_97719190_97722878_97723036_97724599
H1_mix_00082857	chr8	+	4133	19	FSM	ENSG00000132561.14	ENST00000254898.7	4133	19	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_16	13.3425893798027	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGACTTTAAAAAGAATGA	-19	True	NA	NA	False	AATAAA	-20	NA	97869063	98036724	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_97869288_97888074_97888243_97930952_97931523_97941776_97941900_97961407_97961531_97978885_97979009_97994479_97994603_98003660_98003784_98007104_98007228_98007478_98007602_98016539_98016663_98017993_98018117_98021204_98021328_98027415_98027830_98030461_98030615_98032245_98032318_98033041_98033177_98033560_98033660_98035656
H1_mix_00082863	chr8	+	14011	62	FSM	ENSG00000132549.20	ENST00000357162.7	14011	62	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_19	6.47227564739783	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTGAATAAGTGTCATTT	-11	True	NA	NA	False	AATAAA	-17	NA	99013273	99877580	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_99013348_99013759_99013936_99038422_99038567_99096311_99096433_99102952_99103121_99111097_99111280_99115699_99115875_99121176_99121446_99134631_99134728_99135014_99135138_99135595_99135734_99136664_99136753_99142973_99143166_99147840_99148011_99156548_99156744_99170038_99170164_99192875_99193058_99274197_99274333_99275080_99275255_99384207_99384318_99391556_99391705_99431536_99431665_99442400_99442636_99467413_99467635_99481598_99481803_99501686_99501859_99502835_99502951_99507136_99507204_99511103_99511513_99520898_99521011_99556449_99556654_99575657_99575785_99577489_99577634_99641810_99642499_99661353_99661492_99699524_99699933_99717170_99717374_99720344_99720553_99720862_99721048_99766773_99766971_99776774_99776957_99778681_99779032_99784314_99784477_99809374_99809531_99817539_99817804_99818450_99818535_99818712_99818889_99819411_99819583_99819920_99820123_99821293_99821483_99823831_99823979_99832368_99832653_99835196_99835325_99835538_99835739_99848775_99848895_99853450_99854257_99859303_99859481_99861775_99861947_99868288_99868466_99870784_99870888_99871447_99871698_99875417
H1_mix_00082869	chr8	+	960	4	FSM	ENSG00000147669.11	ENST00000353107.8	947	4	-13	0	0	0	multi-exon	FALSE	canonical	3	2086	junction_3	202.374789822141	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGTGTCACTGTGTCA	-26	True	NA	30	True	AATAAA	-16	NA	100150622	100154003	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_100150710_100151346_100151417_100151823_100151917_100153293
H1_mix_00082870	chr8	+	966	4	NNC	ENSG00000147669.11	novel	947	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	1026.52423254398	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGTGTCACTGTGTCA	-26	True	NA	30	True	AATAAA	-16	NA	100150622	100154003	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_100150710_100151346_100151423_100151823_100151917_100153293
H1_mix_00082873	chr8	+	2326	3	FSM	ENSG00000246263.4	ENST00000520820.3	2384	3	58	0	58	0	multi-exon	FALSE	canonical	2	8	junction_2	3.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCGCAATAAAAGTGGTTTT	32	False	NA	NA	False	NA	NA	NA	102239443	102253750	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_102239701_102244004_102244122_102251798
H1_mix_00082875	chr8	+	1019	5	ISM	ENSG00000253320.7	ENST00000520750.6	3878	7	44	23810	10	-2	5prime_fragment	FALSE	canonical	0	0	junction_4	14.6863031427245	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATGTATCAATATTTA	-17	True	NA	9	True	ATTAAA	-18	NA	102864323	102977874	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_102864624_102879894_102880059_102937623_102937758_102941920_102942054_102977586
H1_mix_00082876	chr8	+	753	3	NIC	ENSG00000253320.7	novel	4300	5	NA	NA	10	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	19	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATGTATCAATATTTAA	-17	True	NA	10	True	ATTAAA	-19	NA	102864323	102977875	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_102864624_102879894_102880059_102977586
H1_mix_00082877	chr8	+	2143	4	FSM	ENSG00000253320.7	ENST00000517996.5	756	4	-148	-1239	-148	1101	multi-exon	TRUE	canonical	0	0	junction_3	14.3527000944073	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGTTTCATTTACAATT	NA	False	NA	NA	False	NA	NA	NA	102930033	102978977	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_102930519_102937623_102937758_102941920_102942054_102977586
H1_mix_00082881	chr8	+	6295	13	FSM	ENSG00000155097.12	ENST00000518738.2	5635	13	-20	-640	0	640	multi-exon	TRUE	canonical	3	412	junction_10	28.0449787543748	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAAAGTCATTTGTTTTT	6	True	NA	9	True	AATAAA	-21	NA	103021062	103073691	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_103021226_103040797_103040969_103042339_103042408_103048869_103048956_103051049_103051145_103052730_103052823_103053883_103053983_103055867_103055937_103062954_103063048_103063134_103063229_103064713_103064812_103066320_103066448_103068651
H1_mix_00082882	chr8	+	517	6	FSM	ENSG00000155097.12	ENST00000521671.1	517	6	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_2	14.9586095610521	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAAGTGGTATTGCTTTC	NA	False	NA	NA	False	NA	NA	NA	103051116	103063270	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_103051145_103052730_103052823_103053883_103053983_103055867_103055937_103062954_103063048_103063134
H1_mix_00082887	chr8	+	3728	7	FSM	ENSG00000164930.12	ENST00000358755.5	3728	7	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_5	4.7169905660283	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGAGTATTCTGTGGTT	27	True	NA	18	True	AATAAA	-19	NA	103298897	103332866	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_103298996_103299955_103300285_103318589_103318787_103324480_103325499_103328267_103328417_103329654_103330066_103331340
H1_mix_00082894	chr8	+	2358	10	FSM	ENSG00000176406.23	ENST00000507677.5	3073	10	0	715	0	-715	multi-exon	FALSE	canonical	3	18	junction_5	4.66666666666667	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATGGTCTTGATCTCCTG	NA	False	NA	NA	False	NA	NA	NA	103912131	103976756	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_103912173_103915494_103915595_103916413_103916538_103918440_103918488_103921671_103921785_103931262_103931394_103936550_103936723_103942772_103942927_103961064_103961134_103975349
H1_mix_00082897	chr8	+	4439	15	NIC	ENSG00000164830.19	novel	4406	14	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_10	20.9947758322135	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTTGGATTTATTGAAT	31	True	NA	NA	False	AATAAA	-21	NA	106657901	106752694	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_106658186_106679209_106679293_106683198_106683307_106684245_106684360_106692727_106692878_106702905_106703091_106706381_106707146_106710621_106710791_106713822_106713986_106737519_106737601_106739457_106739584_106740342_106740496_106742221_106742318_106745788_106745863_106750805
H1_mix_00082898	chr8	+	2821	6	FSM	ENSG00000164830.19	ENST00000449762.6	2621	6	-200	0	-200	0	multi-exon	FALSE	canonical	3	12	junction_1	37.3127324113365	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATACAGAAATACAAATGAGT	NA	False	NA	NA	False	AATAAA	-6	NA	106725811	106752679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_106726310_106739457_106739584_106740342_106740496_106742221_106742318_106745788_106745863_106750805
H1_mix_00082899	chr8	+	374	5	FSM	ENSG00000104412.8	ENST00000517593.5	532	5	-13	171	-4	0	multi-exon	FALSE	canonical	3	360	junction_2	15.8823801742686	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTTTACAAGAAGATCCAA	-19	True	NA	NA	False	AATAGA	-30	NA	108443619	108455902	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_108443699_108449822_108449937_108450427_108450493_108453061_108453148_108455872
H1_mix_00082900	chr8	+	528	6	FSM	ENSG00000104412.8	ENST00000524143.5	533	6	5	0	5	0	multi-exon	FALSE	canonical	2	2	junction_1	185.592672269139	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTTTACAAGAAGATCCAA	-1	True	NA	NA	False	AATAGA	-30	NA	108443605	108455902	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_108443699_108446161_108446302_108449822_108449937_108450427_108450493_108453061_108453148_108455872
H1_mix_00082903	chr8	+	522	5	FSM	ENSG00000120533.13	ENST00000521662.5	562	5	0	40	0	0	multi-exon	FALSE	canonical	3	596	junction_1	961.400898428954	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTAAATGTGTTATTTT	-30	True	NA	-14	True	NA	NA	NA	109334323	109343624	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_109334403_109336127_109336205_109339319_109339391_109340488_109340564_109343404
H1_mix_00082904	chr8	+	567	5	FSM	ENSG00000120533.13	ENST00000522766.5	567	5	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_3	1186.13729706978	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTAAATGTGTTATTTT	-30	True	NA	-14	True	NA	NA	NA	109334323	109343624	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_109334403_109336127_109336205_109339319_109339391_109340443_109340564_109343404
H1_mix_00082905	chr8	+	2968	5	FSM	ENSG00000120533.13	ENST00000517311.5	2966	5	-2	0	0	0	multi-exon	FALSE	canonical	3	227	junction_3	1038.3933503254	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTGACTCACATGATTGA	-30	True	NA	15	True	AATAAA	-15	NA	109334323	109345953	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_109334475_109336127_109336205_109339319_109339391_109340443_109340564_109343404
H1_mix_00082907	chr8	+	1542	5	FSM	ENSG00000120533.13	ENST00000523335.1	1540	5	-2	0	0	0	multi-exon	FALSE	canonical	3	171	junction_3	1061.49458312325	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAATGGTACCTCCTAGC	-5	True	NA	NA	False	NA	NA	NA	109334348	109344599	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_109334475_109336127_109336205_109339319_109339391_109340490_109340564_109343404
H1_mix_00082908	chr8	+	1399	3	FSM	ENSG00000120533.13	ENST00000521619.1	1384	3	-15	0	-15	0	multi-exon	FALSE	canonical	3	2799	junction_2	50	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGAAGTTTGCTTGGATT	3897	False	NA	26	True	AATAAA	-15	NA	109338326	109343664	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_109339391_109340488_109340564_109343404
H1_mix_00082912	chr8	+	1353	7	NNC	ENSG00000147654.15	novel	1179	8	NA	NA	-69	-11	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	84.981207072832	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTTATCATAAACATTTT	142	False	NA	NA	False	ATTAAA	-11	NA	109540005	109565149	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_109540112_109550809_109550908_109553864_109553944_109554728_109554888_109556934_109557043_109560837_109560930_109564438
H1_mix_00082913	chr8	+	2173	7	FSM	ENSG00000147654.15	ENST00000337573.10	2383	7	0	210	0	-202	multi-exon	FALSE	canonical	3	89	junction_1	54.6066743987298	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTTTACTTAAAGTGAT	21	True	NA	NA	False	NA	NA	NA	109540172	109565786	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_109540462_109550809_109550908_109553864_109553944_109554728_109554888_109556934_109557043_109560837_109560930_109564438
H1_mix_00082917	chr8	+	1088	3	FSM	ENSG00000254339.6	ENST00000692282.1	925	3	-167	4	-127	-4	multi-exon	FALSE	canonical	3	152	junction_2	757.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCTGGGTGCTAGGTGT	NA	False	NA	NA	False	AATAAA	-10	NA	114281909	114304801	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_114282295_114284218_114284534_114304413
H1_mix_00082919	chr8	+	702	3	FSM	ENSG00000254339.6	ENST00000507929.3	1734	3	-5	1037	0	-183	multi-exon	FALSE	canonical	3	736	junction_2	465.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTAGCAAGTTTGAATAGC	NA	False	NA	NA	False	NA	NA	NA	114282066	114295624	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_114282295_114284218_114284534_114295465
H1_mix_00082932	chr8	+	7908	48	FSM	ENSG00000187955.13	ENST00000297848.8	8009	48	0	101	0	-101	multi-exon	TRUE	canonical	3	53	junction_5	15.5711832368967	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTGACTTACTTTGG	-2	True	NA	NA	False	AATAAA	-19	NA	120125101	120373472	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_120125341_120147805_120147931_120158129_120158247_120162425_120162570_120168160_120168248_120196790_120196947_120197810_120197931_120199401_120199567_120203708_120203871_120206942_120207095_120208231_120208362_120209755_120209902_120212447_120212578_120216350_120216491_120225087_120225215_120226626_120226767_120227219_120227353_120228709_120228770_120231466_120231619_120243878_120244009_120247612_120247736_120250616_120250767_120255239_120255357_120262867_120263015_120266826_120266884_120270034_120270175_120278110_120278235_120278434_120278579_120279934_120280100_120280710_120280750_120280920_120281060_120283635_120283779_120285860_120285971_120289607_120289767_120297510_120297589_120300731_120300819_120310008_120310063_120313931_120314028_120315532_120315587_120315943_120315998_120332140_120332195_120332663_120332736_120341324_120341361_120342379_120342447_120345374_120345564_120367170_120367249_120369329_120369486_120371151
H1_mix_00082938	chr8	+	4594	7	FSM	ENSG00000156787.17	ENST00000518099.5	1159	7	-69	-3366	-28	252	multi-exon	FALSE	canonical	3	164	junction_4	28.4351113160395	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCAGACCACTATTAATCC	13	False	NA	NA	False	ATTAAA	-18	NA	123072653	123104453	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_123072847_123077110_123077258_123082701_123082818_123084161_123084341_123093590_123093743_123097281_123097442_123100806
H1_mix_00082939	chr8	+	3342	21	NIC	ENSG00000156787.17	novel	3478	22	NA	NA	0	-40	combination_of_known_junctions	FALSE	canonical	3	15	junction_16	57.5503258027268	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTGAACTTTTTACAATA	-12	True	NA	-29	True	NA	NA	NA	123072706	123152110	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_123072847_123077110_123077258_123082701_123082818_123084161_123084341_123093590_123093743_123097281_123097442_123100806_123101008_123105287_123105465_123109316_123109397_123109473_123109621_123120054_123120189_123126055_123126190_123126507_123126688_123128280_123128514_123129065_123129219_123130197_123130334_123140760_123140902_123142261_123142457_123144716_123144856_123150035_123150129_123151805
H1_mix_00082940	chr8	+	3531	22	FSM	ENSG00000156787.17	ENST00000287380.6	3478	22	-53	0	-28	0	multi-exon	FALSE	canonical	3	73	junction_19	52.6221718529513	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTAAGCTTTCAGGT	13	False	NA	14	True	AATAAA	-22	NA	123072653	123152153	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_123072847_123077110_123077258_123082701_123082818_123084161_123084341_123093590_123093743_123097281_123097442_123100806_123101008_123105287_123105465_123109316_123109397_123109473_123109621_123120054_123120189_123126055_123126190_123126507_123126688_123128280_123128514_123129065_123129219_123130197_123130334_123134113_123134207_123140760_123140902_123142261_123142457_123144716_123144856_123150035_123150129_123151805
H1_mix_00082941	chr8	+	3041	8	NIC	ENSG00000156787.17	novel	2985	20	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	100	junction_7	43.3250646218767	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTCATGGTGTAAACAAG	-3	True	NA	9	True	AATAAA	-33	NA	123072715	123104201	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_123072847_123077110_123077258_123082701_123082818_123084161_123084341_123093590_123093743_123097281_123097442_123100806_123101008_123102246
H1_mix_00082942	chr8	+	3247	21	NIC	ENSG00000156787.17	novel	3478	22	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_18	57.8393248577471	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTAAGCTTTCAGGT	24	True	NA	14	True	AATAAA	-22	NA	123072742	123152153	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_123072847_123077110_123077258_123082701_123082818_123084161_123084341_123093590_123093743_123097281_123097442_123100806_123101008_123105287_123105465_123109316_123109397_123109473_123109621_123120054_123120189_123126055_123126190_123126507_123126688_123128280_123128514_123129065_123129219_123130197_123130334_123134113_123134207_123140760_123140902_123144716_123144856_123150035_123150129_123151805
H1_mix_00082943	chr8	+	3241	21	NIC	ENSG00000156787.17	novel	3478	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_13	58.1541056160268	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTAAGCTTTCAGGT	-12	True	NA	14	True	AATAAA	-22	NA	123072706	123152153	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_123072847_123077110_123077258_123082701_123082818_123084161_123084341_123093590_123093743_123097281_123097442_123100806_123101008_123105287_123105465_123109316_123109397_123109473_123109621_123120054_123120189_123126055_123126190_123126507_123126688_123129069_123129219_123130197_123130334_123134113_123134207_123140760_123140902_123142261_123142457_123144716_123144856_123150035_123150129_123151805
H1_mix_00082945	chr8	+	2398	4	FSM	ENSG00000156787.17	ENST00000521914.1	2398	4	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_3	41.0852771683483	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTCATGGTGTAAACAAG	NA	False	NA	9	True	AATAAA	-33	NA	123093660	123104201	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_123093743_123097281_123097442_123100806_123101008_123102246
H1_mix_00082951	chr8	+	1320	6	FSM	ENSG00000156795.8	ENST00000287387.7	1519	6	-19	218	0	1	multi-exon	FALSE	canonical	3	85	junction_1	18.1835090122891	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTGAAGATTTTTG	7	True	NA	13	True	AATAAA	-17	NA	123416754	123442022	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_123416933_123427923_123428024_123429982_123430034_123436452_123436602_123437209_123437335_123441305
H1_mix_00082954	chr8	+	3379	2	FSM	ENSG00000170881.5	ENST00000303545.4	3199	2	-180	0	-180	0	multi-exon	FALSE	canonical	3	133	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTATTGTTATATAGTGT	-42	True	NA	NA	False	NA	NA	NA	124474699	124488618	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_124475291_124485830
H1_mix_00082958	chr8	+	1340	4	FSM	ENSG00000147684.10	ENST00000677950.1	1423	4	-16	99	0	-99	multi-exon	FALSE	canonical	3	322	junction_1	1300.3032979527	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCACAAAAATATTTTGTCA	21	True	NA	NA	False	NA	NA	NA	124539161	124550669	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_124539288_124543088_124543280_124546999_124547114_124549760
H1_mix_00082959	chr8	+	2270	3	FSM	ENSG00000147684.10	ENST00000518657.6	2496	3	127	99	127	-99	multi-exon	FALSE	canonical	3	3005	junction_2	72.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCACAAAAATATTTTGTCA	2892	False	NA	NA	False	NA	NA	NA	124542032	124550669	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_124543280_124546999_124547114_124549760
H1_mix_00082964	chr8	+	1468	7	FSM	ENSG00000156831.8	ENST00000522563.5	1037	7	-39	-392	-13	347	multi-exon	FALSE	canonical	3	55	junction_1	49.340371119624	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGCACCACTGCACTCCAGC	7	False	NA	NA	False	NA	NA	NA	125091830	125367467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_125091959_125102316_125102488_125151170_125151278_125182102_125182257_125357218_125357320_125357711_125357819_125366767
H1_mix_00082965	chr8	+	1188	8	FSM	ENSG00000156831.8	ENST00000287437.8	1188	8	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	30.5654199702733	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCCTCCCTGCATGCCTC	5	True	NA	11	True	AATAAA	-17	NA	125091859	125367120	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_125091959_125102050_125102147_125102316_125102488_125151170_125151278_125182102_125182257_125357218_125357320_125357711_125357819_125366767
H1_mix_00082966	chr8	+	1217	8	NIC	ENSG00000156831.8	novel	1188	8	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	51.6601927039	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCCTCCCTGCATGCCTC	13	True	NA	11	True	AATAAA	-17	NA	125091867	125367120	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_125091959_125102013_125102147_125102316_125102488_125151170_125151278_125182102_125182257_125357218_125357320_125357711_125357819_125366767
H1_mix_00082971	chr8	+	2372	3	FSM	ENSG00000136997.21	ENST00000377970.6	2351	3	-21	0	17	0	multi-exon	FALSE	canonical	3	233	junction_1	65.5	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGAATGTTTTGTTTCG	-8	True	NA	35	True	AATAAA	-36	NA	127736062	127741434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_127736624_127738247_127739020_127740395
H1_mix_00082972	chr8	+	2324	3	FSM	ENSG00000136997.21	ENST00000524013.2	2150	3	-174	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	142	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTATTGTTTTTAGAAA	438	False	NA	-27	True	TTTAAA	-9	NA	127736045	127741372	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_127736624_127738250_127739020_127740395
H1_mix_00082990	chr8	+	3234	8	FSM	ENSG00000129292.21	ENST00000337920.8	2311	8	-51	-872	-1	0	multi-exon	FALSE	canonical	3	107	junction_1	18.5505377005518	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAATGGCTCTAATTACT	-27	True	NA	3	True	AATAAA	-14	NA	132775356	132813188	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_132775646_132777795_132777912_132794409_132794582_132794732_132794818_132798771_132798861_132803818_132804033_132804614_132804741_132811045
H1_mix_00082996	chr8	+	6254	21	FSM	ENSG00000129292.21	ENST00000395386.7	6233	21	-21	0	-5	0	multi-exon	FALSE	canonical	3	11	junction_5	38.1154496234794	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCACTGTCTCTGTTAATA	-17	True	NA	7	True	AATAAA	-17	NA	132775366	132848807	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_132775646_132777791_132777912_132794409_132794582_132794732_132794818_132798771_132798861_132799094_132799173_132803818_132804033_132804614_132804741_132811045_132811129_132814636_132814890_132816887_132817077_132817338_132817546_132824003_132824061_132825263_132825372_132832234_132832400_132836539_132836722_132837711_132837812_132839386_132839583_132842514_132842876_132844155_132844319_132845780
H1_mix_00082999	chr8	+	4517	3	FSM	ENSG00000129292.21	ENST00000477051.1	3293	3	0	-1224	0	4	multi-exon	FALSE	canonical	3	78	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTCTCTGTTAATAACGT	6048	False	NA	11	True	AATAAA	-21	NA	132841552	132848811	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_132842876_132844155_132844319_132845780
H1_mix_00083005	chr8	+	2785	3	FSM	ENSG00000104472.10	ENST00000220913.10	2481	3	-304	0	-293	0	multi-exon	FALSE	canonical	3	304	junction_2	46.5	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCAGTTTGGTGGCCTGTC	NA	False	NA	4	True	ATTAAA	-23	NA	140511017	140517154	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_140511647_140514368_140514496_140515125
H1_mix_00083011	chr8	+	2849	6	FSM	ENSG00000184489.13	ENST00000521578.6	2849	6	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	34.2029238516241	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTGTATTTTTTCAAT	-3	True	NA	8	True	AGTAAA	-21	NA	141392020	141432454	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_141392085_141421387_141422346_141425047_141425141_141426938_141427070_141427749_141427825_141430926
H1_mix_00083012	chr8	+	1975	6	NNC	ENSG00000184489.13	novel	1899	5	NA	NA	-14	0	intron_retention	FALSE	canonical	3	15	junction_1	71.4014005464879	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGTGTGTGGAGTGGGC	-5	True	NA	16	True	AATAAA	-13	NA	141417894	141431520	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_141418019_141421387_141422346_141425047_141425141_141426938_141427070_141427749_141427825_141430926
H1_mix_00083013	chr8	+	2813	6	NNC	ENSG00000184489.13	novel	1899	5	NA	NA	10	0	intron_retention	FALSE	canonical	3	15	junction_1	85.5883169597346	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTGTATTTTTTCAAT	19	False	NA	8	True	AGTAAA	-21	NA	141417918	141432454	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_141418019_141421387_141422274_141425047_141425141_141426938_141427070_141427749_141427825_141430926
H1_mix_00083019	chr8	+	1143	4	FSM	ENSG00000160932.11	ENST00000292494.11	1131	4	-12	0	0	0	multi-exon	FALSE	canonical	3	2665	junction_1	504.448874185151	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTGCTCTGAGTGTGG	0	True	NA	14	True	AATAAA	-16	NA	143018516	143022409	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_143018587_143020882_143020992_143021313_143021434_143021565
H1_mix_00083020	chr8	+	1256	5	FSM	ENSG00000160932.11	ENST00000521699.5	1256	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1835.62964333767	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGCTCTGAGTGTGGCT	0	True	NA	16	True	AATAAA	-18	NA	143018516	143022411	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_143018587_143020261_143020378_143020887_143020992_143021313_143021434_143021565
H1_mix_00083028	chr8	+	3755	5	Fusion	ENSG00000250571.7_ENSG00000181638.20	novel	1297	3	NA	NA	-450	0	multi-exon	FALSE	canonical	2	3	junction_2	28.4692816909735	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGAGCCGGCACCTGCCT	1744	False	NA	20	True	AATAAA	-20	NA	143248690	143276931	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr8_+_143249500_143249689_143251341_143269359_143269521_143274703_143274803_143275896
H1_mix_00083030	chr8	+	1349	4	FSM	ENSG00000250571.7	ENST00000340042.2	1335	4	-14	0	-2	0	multi-exon	FALSE	canonical	3	33	junction_1	14.3836326735943	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGAGCCGGCACCTGCCT	NA	False	NA	20	True	AATAAA	-20	NA	143267430	143276931	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_143267485_143269359_143269521_143274703_143274803_143275896
H1_mix_00083031	chr8	+	1939	4	NNC	ENSG00000250571.7	novel	1335	4	NA	NA	10	0	at_least_one_novel_splicesite	TRUE	canonical	3	10	junction_1	24.7116706571342	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGAGCCGGCACCTGCCT	-7	True	NA	20	True	AATAAA	-20	NA	143267454	143276931	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_143268099_143269359_143269521_143274703_143274803_143275896
H1_mix_00083035	chr8	+	4102	14	NIC	ENSG00000158106.14	novel	3695	15	NA	NA	0	0	intron_retention	TRUE	canonical	3	39	junction_5	24.1707437219256	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCCAGTAGGCACTAACT	-1	True	NA	13	True	AATAAA	-14	NA	143368875	143384218	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_143369048_143375552_143375669_143376524_143376654_143377379_143377456_143378268_143378347_143378695_143378821_143378911_143379079_143379314_143379509_143379828_143379986_143380064_143380784_143381267_143381345_143381571_143381719_143381806_143381969_143382435
H1_mix_00083036	chr8	+	3695	15	FSM	ENSG00000158106.14	ENST00000289013.11	3695	15	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_10	27.1850236381005	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGTAGGCACTAACTGGG	-1	True	NA	16	True	AATAAA	-17	NA	143368875	143384221	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_143369048_143375552_143375669_143376524_143376654_143377379_143377456_143378268_143378347_143378695_143378821_143378911_143379079_143379314_143379509_143379828_143379986_143380061_143380176_143380588_143380784_143381267_143381345_143381571_143381719_143381806_143381969_143382435
H1_mix_00083053	chr8	+	1976	7	FSM	ENSG00000178719.17	ENST00000313269.5	1968	7	-8	0	-6	0	multi-exon	TRUE	canonical	3	144	junction_1	160.402358669275	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCCTGGTCACTCTTCT	-6	True	NA	23	True	AATAAA	-18	NA	143990049	143993415	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_143990312_143991199_143991603_143991691_143991805_143991877_143992079_143992244_143992374_143992464_143992609_143992691
H1_mix_00083056	chr8	+	2892	2	FSM	ENSG00000178896.9	ENST00000527954.1	1065	2	-768	-1059	7	990	multi-exon	FALSE	canonical	3	456	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAAAAAACAAAAAAAA	36	False	NA	NA	False	NA	NA	NA	144078654	144081638	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144080150_144080241
H1_mix_00083059	chr8	+	2054	12	FSM	ENSG00000197858.11	ENST00000355091.9	2054	12	0	0	0	0	multi-exon	FALSE	canonical	2	380	junction_8	87.8494203803134	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGCTCCTGGCCCGCTG	-5	True	NA	27	True	AATAAA	-23	NA	144082633	144086216	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144082805_144083123_144083304_144083388_144083501_144083713_144083862_144083938_144084041_144084133_144084331_144084412_144084610_144084721_144084876_144085042_144085139_144085288_144085480_144085572_144085744_144085881
H1_mix_00083060	chr8	+	936	4	FSM	ENSG00000197858.11	ENST00000530796.1	936	4	0	0	0	0	multi-exon	FALSE	canonical	2	380	junction_1	122.158367157828	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGAAATAAATGAGTGTCT	642	False	NA	-6	True	NA	NA	NA	144084792	144086183	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144084876_144085042_144085139_144085288_144085744_144085881
H1_mix_00083065	chr8	+	1754	7	FSM	ENSG00000179632.10	ENST00000534585.5	1754	7	0	0	0	0	multi-exon	FALSE	canonical	3	799	junction_5	49.4955104585815	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGACCTGATGCGGTGT	23	False	NA	25	True	AATAAA	-16	NA	144104511	144107611	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144104859_144105639_144105767_144105868_144105998_144106075_144106242_144106342_144106675_144106834_144106964_144107087
H1_mix_00083068	chr8	+	2534	6	FSM	ENSG00000235173.7	ENST00000347708.5	2534	6	0	0	0	0	multi-exon	TRUE	canonical	3	268	junction_3	20.5854317418897	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACCCTCAGTTTACTGGA	-22	True	NA	15	True	AATAAA	-27	NA	144137773	144140851	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144138429_144138506_144138608_144138714_144138814_144139008_144139101_144139188_144139312_144139387
H1_mix_00083071	chr8	+	1736	12	FSM	ENSG00000179832.18	ENST00000423230.6	1712	12	-24	0	-4	0	multi-exon	FALSE	canonical	3	10	junction_11	25.4353823970852	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGGGACATTTTTGTA	1	True	NA	7	True	AATAAA	-17	NA	144148011	144213467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144148077_144163770_144163849_144168294_144168441_144179454_144179587_144180177_144180341_144180424_144180524_144190783_144190936_144191714_144191856_144192308_144192402_144199121_144199201_144200427_144200542_144212993
H1_mix_00083074	chr8	+	5085	42	FSM	ENSG00000179832.18	ENST00000534366.5	5092	42	7	0	7	0	multi-exon	TRUE	canonical	1	2	junction_1	15.2804050763727	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGACCACAGCCTGGGC	-5	True	NA	NA	False	NA	NA	NA	144148651	144261809	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144148713_144163770_144163849_144168294_144168441_144179454_144179587_144180177_144180341_144180424_144180524_144190783_144190936_144191714_144191856_144192308_144192402_144199121_144199201_144200427_144200542_144220599_144220674_144223107_144223231_144238755_144238864_144239034_144239180_144239322_144239364_144239613_144239756_144240100_144240154_144240569_144240678_144240991_144241112_144241394_144241518_144242368_144242516_144243493_144243617_144243862_144243943_144244221_144244337_144244443_144244540_144245155_144245261_144247300_144247437_144247566_144247680_144248876_144249030_144250211_144250367_144254812_144254979_144255508_144255706_144258776_144258915_144259239_144259355_144259910_144260058_144260185_144260375_144260676_144260833_144260906_144261042_144261113_144261217_144261283_144261350_144261654
H1_mix_00083075	chr8	+	5234	43	FSM	ENSG00000179832.18	ENST00000528919.5	5234	43	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_23	14.3243920854178	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGTGACTGACAGGGTGCG	NA	False	NA	3	True	AATAAA	-16	NA	144161024	144261927	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144161090_144163770_144163849_144168294_144168441_144179454_144179587_144180177_144180341_144180424_144180524_144190783_144190936_144191714_144191856_144192308_144192402_144199121_144199201_144200427_144200542_144220599_144220674_144223107_144223231_144238755_144238864_144239034_144239180_144239322_144239364_144239613_144239756_144240100_144240154_144240569_144240678_144240991_144241112_144241394_144241518_144242368_144242516_144242601_144242629_144243493_144243617_144243862_144243943_144244221_144244337_144244443_144244540_144245155_144245261_144247300_144247437_144247566_144247680_144248876_144249030_144250211_144250367_144254812_144254979_144255508_144255706_144258776_144258915_144259239_144259355_144259910_144260058_144260185_144260375_144260676_144260833_144260906_144261042_144261113_144261217_144261283_144261350_144261654
H1_mix_00083081	chr8	+	2139	13	NNC	ENSG00000185122.11	novel	2134	13	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_3	273.40136348518	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTATGGCCTCCATGTGT	-7	True	NA	16	True	TATAAA	-13	NA	144291592	144314716	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_144291875_144308905_144309015_144309454_144309590_144309771_144309897_144311173_144311250_144311320_144311383_144311504_144311602_144311699_144311837_144311962_144312245_144313510_144313617_144313845_144313912_144313984_144314055_144314124
H1_mix_00083090	chr8	+	2158	5	FSM	ENSG00000185803.12	ENST00000643944.2	2158	5	0	0	0	0	multi-exon	FALSE	canonical	3	464	junction_1	30.8747469625259	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGGCATTAATTCTTT	13	True	NA	28	True	AATAAA	-15	NA	144358612	144361272	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144359066_144359183_144359424_144359622_144360494_144360589_144360714_144360802
H1_mix_00083091	chr8	+	2294	4	FSM	ENSG00000185803.12	ENST00000533662.2	2294	4	0	0	0	0	multi-exon	FALSE	canonical	3	519	junction_3	13.490737563232	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGGCATTAATTCTTT	-5	True	NA	28	True	AATAAA	-15	NA	144358594	144361272	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144359424_144359622_144360494_144360589_144360714_144360802
H1_mix_00083092	chr8	+	1972	15	FSM	ENSG00000173137.12	ENST00000308860.11	1960	15	-12	0	-7	0	multi-exon	TRUE	canonical	3	35	junction_8	13.9855975480317	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTCCTTGTGTTTTGT	-21	True	NA	NA	False	NA	NA	NA	144374034	144393242	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144374108_144379386_144379491_144383080_144383231_144390670_144390747_144390855_144391057_144391133_144391275_144391360_144391475_144391579_144391712_144391782_144391867_144391940_144392023_144392091_144392171_144392253_144392346_144392444_144392698_144392775_144392893_144392968
H1_mix_00083093	chr8	+	631	6	FSM	ENSG00000173137.12	ENST00000526833.2	631	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	23.7014767472409	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAGTGTGCGCTCAGGCC	20	True	NA	NA	False	GGGGCT	-8	NA	144374075	144391055	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144374108_144379386_144379491_144383080_144383231_144389262_144389337_144390670_144390747_144390860
H1_mix_00083094	chr8	+	616	1	FSM	ENSG00000272115.1	ENST00000607491.1	485	1	-197	66	-197	-66	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCCTAGGACCTAGAAACG	NA	False	NA	NA	False	NA	NA	NA	144409294	144409910	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144409300_144409900
H1_mix_00083096	chr8	+	3272	18	FSM	ENSG00000167702.13	ENST00000645548.2	3272	18	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_5	15.277592882737	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGGGAGGGAGGAGTGGCC	-11	True	NA	108	True	NA	NA	NA	144466336	144474202	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144466519_144466759_144466839_144466958_144467111_144467202_144467342_144467484_144467631_144467713_144467780_144467858_144467988_144468328_144468407_144468535_144468651_144468724_144468835_144469270_144469380_144469489_144469648_144471941_144472047_144472137_144472260_144472360_144472485_144472576_144472707_144472794_144473052_144473131
H1_mix_00083102	chr8	+	1589	7	ISM	ENSG00000160972.10	ENST00000292539.8	2722	11	8996	1	0	0	intron_retention	FALSE	canonical	3	121	junction_2	18.1605494287908	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCGTTGTGTGTTGTGT	2567	False	NA	11	True	GATAAA	-18	NA	144499025	144502120	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_144499062_144500095_144500200_144500266_144500392_144500486_144500613_144500685_144500762_144500841_144500972_144501128
H1_mix_00083107	chr8	+	5421	4	FSM	ENSG00000160959.8	ENST00000292524.6	5337	4	0	-84	0	84	multi-exon	FALSE	canonical	3	50	junction_1	56.1505911713215	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGGGAGAGCCACCCAAC	-5	True	NA	119	True	NA	NA	NA	144517991	144525256	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144518042_144519614_144520055_144520237_144520823_144520910
H1_mix_00083108	chr8	+	4794	6	NIC	ENSG00000160959.8	novel	5337	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	48	junction_1	52	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAACATTTTCTTAAAGC	-5	True	NA	35	True	AATAAA	-23	NA	144517991	144525172	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_144518042_144519700_144520055_144520237_144520823_144520910_144523334_144523635_144524106_144524260
H1_mix_00083111	chr8	+	2621	4	FSM	ENSG00000147789.16	ENST00000532382.5	855	4	-21	-1745	16	0	multi-exon	FALSE	canonical	3	62	junction_1	18.263503375737	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTATTTTATATGGAATCG	-28	True	NA	21	True	AATAAA	-17	NA	144827533	144843220	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144827610_144829042_144829605_144837390_144837508_144841354
H1_mix_00083112	chr8	+	2771	5	FSM	ENSG00000147789.16	ENST00000532777.6	2760	5	-11	0	-6	0	multi-exon	FALSE	canonical	3	42	junction_2	22.0056810846654	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTGAGTAGGTTAAAATAA	-13	True	NA	105	True	NA	NA	NA	144827548	144843772	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144827610_144829042_144829091_144829477_144829605_144837390_144837508_144841354
H1_mix_00083113	chr8	+	2804	5	FSM	ENSG00000147789.16	ENST00000446747.7	2794	5	-10	0	-6	0	multi-exon	FALSE	canonical	3	11	junction_2	32.7900518450337	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTGAGTAGGTTAAAATAA	-13	True	NA	105	True	NA	NA	NA	144827548	144843772	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144827610_144829042_144829091_144829444_144829605_144837390_144837508_144841354
H1_mix_00083114	chr8	+	1882	5	FSM	ENSG00000147789.16	ENST00000525266.5	1874	5	-9	1	-5	-1	multi-exon	FALSE	canonical	1	2	junction_4	25.5868618630734	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTGGAATTGCTTTTTAT	-12	True	NA	NA	False	AATAAA	-17	NA	144827549	144847508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144827610_144829042_144829091_144829477_144829605_144837390_144837508_144845978
H1_mix_00083116	chr8	+	2590	5	FSM	ENSG00000182307.14	ENST00000331434.7	2588	5	-2	0	0	0	multi-exon	FALSE	canonical	1	228	junction_2	185.038509505454	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTCTTGTGTCTTT	-5	True	NA	26	True	NA	NA	NA	145052464	145056030	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_145052498_145052585_145052898_145053061_145053147_145053296_145053444_145054017
H1_mix_00083118	chr8	-	736	3	FSM	ENSG00000223508.5	ENST00000606975.1	736	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTTCATAAGAGTGACA	26	False	NA	NA	False	CATAAA	-8	NA	232211	213185	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_213711_219289_219418_232128
H1_mix_00083119	chr8	-	377	3	FSM	ENSG00000223508.5	ENST00000606507.1	370	3	0	-7	0	7	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACGGTTTTGCATTTT	6	True	NA	NA	False	AATAAA	-20	NA	232231	230000	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_230171_230803_230908_232128
H1_mix_00083120	chr8	-	574	1	FSM	ENSG00000272240.1	ENST00000606572.1	541	1	-257	224	-257	-224	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCATTTTTGTTCTCTG	NA	False	NA	NA	False	AATGAA	-40	NA	235144	234570	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_234600_235100
H1_mix_00083122	chr8	-	765	1	FSM	ENSG00000272293.1	ENST00000607549.1	630	1	-142	7	-142	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAAAGTGACATCATTTT	NA	False	NA	-7	True	AATAAA	-21	NA	451485	450720	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_450700_451500
H1_mix_00083123	chr8	-	3887	1	FSM	ENSG00000272293.1	ENST00000607549.1	630	1	-3264	7	-3264	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAAAGTGACATCATTTT	NA	False	NA	-7	True	AATAAA	-21	NA	454607	450720	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_450700_454600
H1_mix_00083124	chr8	-	3088	3	FSM	ENSG00000180190.13	ENST00000324079.11	3088	3	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_1	51	809	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTATTGGTTTGCATG	25	True	NA	-9	True	AATAAA	-19	NA	544834	489945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_492745_494493_494598_544649
H1_mix_00083125	chr8	-	1805	6	FSM	ENSG00000104714.14	ENST00000262109.8	1798	6	0	-7	0	7	multi-exon	FALSE	canonical	3	215	junction_2	23.8243572840906	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTTGAGTTTTTTTTCT	-21	True	NA	-48	True	ATTAAA	-25	NA	731224	664192	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_664677_668597_668793_673288_674048_692477_692613_715860_716008_731139
H1_mix_00083126	chr8	-	1988	7	NNC	ENSG00000104714.14	novel	1798	6	NA	NA	0	7	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	107.939412017421	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTTGAGTTTTTTTTCT	-21	True	NA	-48	True	ATTAAA	-25	NA	731224	664192	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_664677_668597_668793_672021_672205_673288_674048_692477_692613_715860_716008_731139
H1_mix_00083127	chr8	-	585	2	FSM	ENSG00000104714.14	ENST00000518895.1	585	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACATTAGAGCCGGGGCCG	454	False	NA	NA	False	NA	NA	NA	673462	671793	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_672205_673288
H1_mix_00083128	chr8	-	682	4	FSM	ENSG00000104714.14	ENST00000524138.5	682	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	117.379725676967	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAATGAAGGGGAAGGCGT	8531	False	NA	NA	False	NA	NA	NA	715927	673766	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_674048_690897_691097_692477_692613_715860
H1_mix_00083129	chr8	-	2238	2	FSM	ENSG00000253982.3	ENST00000665209.2	2199	2	-40	1	-40	-1	multi-exon	FALSE	canonical	3	264	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCAAGACTCCATCTCAAA	1439	False	NA	NA	False	NA	NA	NA	1763386	1761054	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_1762929_1763022
H1_mix_00083130	chr8	-	1949	2	FSM	ENSG00000253982.3	ENST00000659375.1	1940	2	0	-9	0	-1	multi-exon	FALSE	canonical	3	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCAAGACTCCATCTCAAA	317	False	NA	NA	False	NA	NA	NA	1764508	1761054	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_1762929_1764433
H1_mix_00083131	chr8	-	1733	2	FSM	ENSG00000253764.4	ENST00000517676.2	1913	2	0	180	0	-152	multi-exon	FALSE	canonical	2	3	junction_1	0	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACAACAGATAATTTCCCA	1579	False	NA	-88	True	NA	NA	NA	1973176	1971332	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_1973037_1973147
H1_mix_00083132	chr8	-	2399	2	FSM	ENSG00000246089.4	ENST00000500118.3	2415	2	2	14	0	-14	multi-exon	FALSE	canonical	3	25	junction_1	0	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCACTTAACAAAATGTGTT	6	True	NA	NA	False	AATAAA	-11	NA	6406548	6403564	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_6405121_6405705
H1_mix_00083133	chr8	-	1137	1	FSM	ENSG00000246089.4	ENST00000606853.1	1137	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGTTATGGTTTACTT	12	True	NA	-16	True	AATAAA	-15	NA	6406542	6405405	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_6405400_6406500
H1_mix_00083134	chr8	-	1244	2	NNC	ENSG00000246089.4	novel	1017	3	NA	NA	-61	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGTTATGGTTTACTT	NA	False	NA	-16	True	AATAAA	-15	NA	6407203	6405405	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_6406528_6407081
H1_mix_00083135	chr8	-	1596	1	FSM	ENSG00000271743.1	ENST00000607368.1	1595	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGTCTACTTTCCATTT	NA	False	NA	NA	False	GATAAA	-21	NA	6617198	6615602	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_6615600_6617200
H1_mix_00083136	chr8	-	1198	3	FSM	ENSG00000249898.9	ENST00000527490.2	1198	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAATCAGGCGGAGGCTA	-16	True	NA	NA	False	AAAACA	-45	NA	6708224	6627021	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_6627311_6634594_6635420_6708140
H1_mix_00083137	chr8	-	3024	2	FSM	ENSG00000249898.9	ENST00000670222.1	3024	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGATTTATCTTGTATA	-8	True	NA	NA	False	NA	NA	NA	6708216	6667292	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_6670241_6708140
H1_mix_00083138	chr8	-	1103	2	NNC	ENSG00000249898.9	novel	2490	5	NA	NA	-7	-20633	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTATGCTTGAGTCTTC	22	True	NA	0	True	ATTAAA	-30	NA	6708186	6687925	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_6688983_6708140
H1_mix_00083139	chr8	-	8281	7	FSM	ENSG00000275591.5	ENST00000618742.3	4773	7	3	-3511	3	3511	multi-exon	FALSE	canonical	2	18	junction_4	4.87909372276815	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGACTGCTGGTGATTG	-8	True	NA	1	True	AATAAA	-27	NA	6835521	6805005	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_6812340_6815806_6815919_6821868_6822039_6823520_6823731_6825164_6825350_6832716_6832901_6835435
H1_mix_00083140	chr8	-	826	1	FSM	ENSG00000214268.2	ENST00000397972.2	663	1	3	-166	3	166	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAACAAGAAACAACAATGA	NA	False	NA	NA	False	AAAACA	-32	NA	7191560	7190734	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_7190700_7191600
H1_mix_00083141	chr8	-	481	2	Intergenic	novelGene_1420	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCGATTCTGGAGCCAGGTG	NA	False	NA	NA	False	NA	NA	NA	7227782	7220303	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_-_7220465_7227462
H1_mix_00083142	chr8	-	218	1	FSM	ENSG00000284614.1	ENST00000641497.1	218	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGACGCGGGCGCTGG	75	False	NA	NA	False	NA	NA	NA	7221930	7221712	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_7221700_7221900
H1_mix_00083143	chr8	-	1583	4	FSM	ENSG00000255378.1	ENST00000528972.1	1587	4	0	4	0	-4	multi-exon	TRUE	canonical	2	3	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTAGTGGTGACTGCTG	NA	False	NA	NA	False	AATAAA	-17	NA	7781413	7778594	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_7779794_7780021_7780090_7780334_7780397_7781159
H1_mix_00083144	chr8	-	857	3	NNC	ENSG00000253893.2	novel	792	5	NA	NA	58132	66662	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_2	39.5	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGGTTTTGTCAAAACG	NA	False	NA	NA	False	NA	NA	NA	8168482	8101156	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_8101219_8134651_8134741_8167776
H1_mix_00083145	chr8	-	475	1	FSM	ENSG00000268955.2	ENST00000594215.2	661	1	252	-66	252	66	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTGAAACCCAGGCACAT	NA	False	NA	NA	False	AATACA	-40	NA	8188943	8188468	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_8188500_8188900
H1_mix_00083146	chr8	-	4853	6	FSM	ENSG00000275342.5	ENST00000615670.5	4845	6	0	-8	0	8	multi-exon	FALSE	canonical	3	21	junction_1	1.93907194296653	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATCCTTAAGTGCCTGA	-6	True	NA	-10	True	ATTAAA	-31	NA	8386439	8317727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_8319303_8327709_8328462_8339477_8339636_8376246_8378079_8381417_8381835_8386320
H1_mix_00083147	chr8	-	6407	3	FSM	ENSG00000147324.11	ENST00000276282.7	6399	3	0	-8	0	8	multi-exon	FALSE	canonical	3	73	junction_1	12.5	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCCAGAACTTAATTATTT	-27	True	NA	-21	True	AATAAA	-29	NA	8893630	8783345	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_8786056_8797364_8797492_8890060
H1_mix_00083148	chr8	-	270	1	FSM	ENSG00000270966.1	ENST00000603391.1	286	1	9	7	9	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGGGAATAAATTCTATCAC	NA	False	NA	NA	False	NA	NA	NA	8933997	8933727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_8933700_8934000
H1_mix_00083149	chr8	-	5510	2	FSM	ENSG00000173281.5	ENST00000310455.4	5510	2	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	0	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAAGTGTCCTTCTATTC	2	True	NA	NA	False	AATAAA	-17	NA	9150658	9136254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_9141669_9150562
H1_mix_00083150	chr8	-	308	2	FSM	ENSG00000253252.2	ENST00000521298.2	328	2	0	20	0	-20	multi-exon	FALSE	canonical	3	34	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCTATTCACATGATGAAA	880	False	NA	-35	True	AATAAA	-5	NA	9182519	9180270	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_9180523_9182463
H1_mix_00083151	chr8	-	1379	1	FSM	ENSG00000272267.2	ENST00000607598.2	1377	1	-4	2	-4	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCTCTCTCTGAAATTT	NA	False	NA	3	True	ATTAAA	-21	NA	9556524	9555145	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_9555100_9556500
H1_mix_00083152	chr8	-	3306	3	FSM	ENSG00000253230.10	ENST00000667251.1	3111	3	1	-196	0	123	multi-exon	FALSE	canonical	3	121	junction_2	2	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATAGGTTCATCTTTTTA	4888	False	NA	-4	True	AATAAA	-15	NA	9903397	9899747	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_9900287_9900554_9900613_9900688
H1_mix_00083153	chr8	-	3578	2	FSM	ENSG00000253230.10	ENST00000654192.1	3252	2	1	-327	0	127	multi-exon	FALSE	canonical	3	121	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTCATCTTTTTATTTC	4888	False	NA	0	True	AATAAA	-19	NA	9903397	9899743	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_9900613_9900688
H1_mix_00083154	chr8	-	3260	2	FSM	ENSG00000253230.10	ENST00000667273.1	3260	2	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGGAATGATCTTCCAG	4887	False	NA	NA	False	NA	NA	NA	9903398	9899870	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_9900287_9900554
H1_mix_00083155	chr8	-	3592	1	FSM	ENSG00000253230.10	ENST00000517675.1	3334	1	0	-258	0	65	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGCCTTATTGAGGGCAA	4888	False	NA	-62	True	NA	NA	NA	9903397	9899805	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_9899800_9903400
H1_mix_00083156	chr8	-	1546	7	FSM	ENSG00000254093.9	ENST00000314787.8	1546	7	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_2	30.6865877325366	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGATTCAGATTGTTCT	7	True	NA	-6	True	ATTAAA	-17	NA	10839875	10764960	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_10765917_10820192_10820270_10826151_10826245_10831664_10831744_10832891_10832985_10834665_10834776_10839737
H1_mix_00083157	chr8	-	1470	6	FSM	ENSG00000254093.9	ENST00000519088.5	1272	6	0	-198	0	0	multi-exon	FALSE	canonical	3	42	junction_1	72.1470720126604	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGATTCAGATTGTTCT	6	True	NA	-6	True	ATTAAA	-17	NA	10839876	10764960	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_10765917_10826151_10826245_10831664_10831744_10832891_10832985_10834665_10834776_10839737
H1_mix_00083158	chr8	-	3164	1	FSM	ENSG00000280294.1	ENST00000624866.1	3352	1	188	0	188	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACACGTGTGTGTGGCTTTT	NA	False	NA	NA	False	TATAAA	-17	NA	10859248	10856084	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_10856100_10859200
H1_mix_00083159	chr8	-	5034	3	FSM	ENSG00000171044.11	ENST00000416569.3	4327	3	-552	-155	-552	155	multi-exon	FALSE	canonical	2	11	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGAGGCTTCTCCTTCCCAC	NA	False	NA	NA	False	AATAAA	-17	NA	11202385	10895889	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_10898917_10924633_10924831_11200575
H1_mix_00083160	chr8	-	2193	1	FSM	ENSG00000269918.1	ENST00000602575.1	2014	1	-738	559	-738	-559	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTCTAAAGATATACATTC	7376	False	NA	-10	True	AATAAA	-19	NA	11107442	11105249	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_11105200_11107400
H1_mix_00083161	chr8	-	2495	1	FSM	ENSG00000255310.2	ENST00000530248.2	1939	1	-235	-321	-235	321	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGCCTAAAATCCTAGCACT	4857	False	NA	NA	False	NA	NA	NA	11109961	11107466	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_11107500_11110000
H1_mix_00083162	chr8	-	2320	3	NNC	ENSG00000171044.11	novel	728	3	NA	NA	0	742	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_1	2.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGCACCACTGCACTCCAG	-14	True	NA	NA	False	NA	NA	NA	11201833	11110902	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_11111893_11114020_11114093_11200575
H1_mix_00083163	chr8	-	2914	3	FSM	ENSG00000171044.11	ENST00000529336.1	728	3	-1551	-635	-552	635	multi-exon	FALSE	canonical	3	28	junction_1	18.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGAAAAAGCCAGGCGTGG	NA	False	NA	NA	False	ACTAAA	-24	NA	11202385	11111009	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_11111893_11113871_11114093_11200575
H1_mix_00083164	chr8	-	1588	1	FSM	ENSG00000280273.2	ENST00000638924.1	1588	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTACCAACTTTCCTTGG	2	True	NA	-8	True	AATAAA	-37	NA	11285068	11283480	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_11283500_11285100
H1_mix_00083165	chr8	-	4210	3	FSM	ENSG00000154319.16	ENST00000284486.9	4067	3	-130	-13	-130	13	multi-exon	FALSE	canonical	3	20	junction_1	2	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCCTTTTAGCTTGTCC	9103	False	NA	0	True	AATAAA	-15	NA	11466883	11421462	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_11424637_11444030_11444809_11466625
H1_mix_00083166	chr8	-	3734	10	FSM	ENSG00000164733.22	ENST00000353047.11	3733	10	0	-1	0	1	multi-exon	FALSE	canonical	3	515	junction_6	31.7867120307904	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGATTCATTCCATGC	1	True	NA	-2	True	AATAAA	-20	NA	11868087	11842522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_11845223_11845660_11845790_11847051_11847169_11847678_11847823_11848066_11848153_11849045_11849165_11850865_11850981_11852609_11852696_11853328_11853480_11868000
H1_mix_00083167	chr8	-	3835	11	FSM	ENSG00000164733.22	ENST00000678242.1	3835	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_9	214.834378068316	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCATAACCTCAATAAAGT	NA	False	NA	-39	True	NA	NA	NA	11868137	11842559	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_11845223_11845660_11845790_11847051_11847169_11847678_11847823_11848066_11848153_11849045_11849165_11850865_11850981_11852609_11852696_11853328_11853480_11864375_11864464_11868000
H1_mix_00083168	chr8	-	3261	10	FSM	ENSG00000164733.22	ENST00000678145.1	3811	10	550	0	4	0	multi-exon	FALSE	canonical	2	6	junction_9	175.284178435695	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTCAGGAGTTCAAGACCA	589	False	NA	NA	False	NA	NA	NA	11867526	11843181	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_11845223_11845660_11845790_11847051_11847169_11847678_11847823_11848066_11848153_11849045_11849165_11850865_11850981_11852609_11852696_11853328_11853480_11867253
H1_mix_00083171	chr8	-	3111	2	FSM	ENSG00000284610.1	ENST00000641966.1	3141	2	0	30	0	-30	multi-exon	FALSE	canonical	2	4	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGAAGTATCAGGAGGAG	NA	False	NA	NA	False	AATATA	-5	NA	12015193	12006217	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_12008966_12014830
H1_mix_00083172	chr8	-	1395	4	FSM	ENSG00000205879.5	ENST00000511144.3	1395	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	2.94392028877595	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGCAGGTGGCAGGGGCT	NA	False	NA	NA	False	NA	NA	NA	12175771	12172760	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_12173724_12174387_12174497_12174954_12175155_12175648
H1_mix_00083173	chr8	-	2616	7	NIC	ENSG00000186523.15	novel	2043	8	NA	NA	0	269	combination_of_known_junctions	FALSE	canonical	3	11	junction_4	27.7393623254433	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCGGCTCCAGCATCGTTT	NA	False	NA	NA	False	NA	NA	NA	12194082	12181826	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_12183707_12185375_12185526_12186699_12186834_12188071_12188174_12189807_12189889_12191778_12191842_12193876
H1_mix_00083174	chr8	-	922	5	FSM	ENSG00000186523.15	ENST00000524893.5	922	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	28.3405628031625	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATCAAAACTGCCCTCTA	NA	False	NA	NA	False	ATTAAA	-11	NA	12194082	12183479	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_12183707_12185233_12185526_12186699_12186834_12191778_12191842_12193876
H1_mix_00083175	chr8	-	778	7	FSM	ENSG00000186523.15	ENST00000529060.5	778	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	26.560727065015	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAACCCCCACGCCCACCC	NA	False	NA	NA	False	NA	NA	NA	12194065	12185375	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_12185526_12186699_12186834_12188071_12188217_12188310_12188425_12189807_12189889_12191778_12191842_12193974
H1_mix_00083177	chr8	-	2013	4	FSM	ENSG00000251402.3	ENST00000528404.2	1395	4	-56	-562	-56	562	multi-exon	FALSE	canonical	0	0	junction_3	4.08248290463863	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTGTCTTTTGACTCTC	NA	False	NA	NA	False	AATAAA	-17	NA	12418146	12414517	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_12416043_12416706_12416816_12417273_12417474_12417967
H1_mix_00083179	chr8	-	1268	8	FSM	ENSG00000145002.13	ENST00000262365.9	2518	8	57	1193	0	147	multi-exon	FALSE	canonical	3	8	junction_2	22.6886647955335	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGTGTGTATCAAGGATGA	11	False	NA	NA	False	AATAAA	-1	NA	12436343	12425613	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_12425990_12427656_12427807_12428632_12428899_12428980_12429115_12430349_12430452_12432081_12432163_12434051_12434115_12436247
H1_mix_00083180	chr8	-	806	6	NIC	ENSG00000145002.13	novel	953	7	NA	NA	45	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_5	22.6150392438306	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAAACTGCCCTCTAAT	56	False	NA	NA	False	ATTAAA	-13	NA	12436298	12425760	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_12425990_12427656_12427807_12428980_12429115_12432081_12432163_12434051_12434115_12436149
H1_mix_00083181	chr8	-	885	7	NIC	ENSG00000145002.13	novel	2518	8	NA	NA	0	-134	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	22.8235988982164	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTAGGACTCACACATGAC	11	False	NA	NA	False	NA	NA	NA	12436343	12425894	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_12425990_12427656_12427807_12428632_12428899_12428980_12429115_12432081_12432163_12434051_12434115_12436247
H1_mix_00083182	chr8	-	447	5	ISM	ENSG00000145002.13	ENST00000687060.1	2158	6	57	3321	0	-1973	5prime_fragment	FALSE	canonical	3	31	junction_2	19.1637678967368	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCGGGCTCCTGAGGTCT	11	False	NA	NA	False	NA	NA	NA	12436343	12427733	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_-_12427807_12428980_12429115_12432081_12432163_12434051_12434115_12436247
H1_mix_00083183	chr8	-	3029	2	FSM	ENSG00000283674.3	ENST00000660816.1	3013	2	0	-16	0	16	multi-exon	FALSE	canonical	3	5	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTAGTGTCTGAGGAGTT	NA	False	NA	NA	False	AATAAA	-19	NA	12491970	12485122	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_12487909_12491727
H1_mix_00083184	chr8	-	5619	5	FSM	ENSG00000283674.3	ENST00000641839.1	5619	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	31.1809236553377	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAGGGGAACATCACACA	NA	False	NA	NA	False	ATTAAA	-21	NA	12607664	12505000	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_12509801_12511121_12511258_12601157_12601399_12601786_12601855_12607290
H1_mix_00083185	chr8	-	1770	6	FSM	ENSG00000283674.3	ENST00000637678.1	1770	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	31.0032256386332	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTTTGTAAAGAGAATG	58	False	NA	NA	False	AATAAA	-41	NA	12665514	12594969	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_12595297_12596017_12596215_12601157_12601399_12601786_12601855_12659129_12659830_12665277
H1_mix_00083186	chr8	-	986	4	NIC	ENSG00000283674.3	novel	1770	6	NA	NA	10	5	combination_of_known_junctions	FALSE	canonical	3	82	junction_3	56.4052795007307	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAATAATTATTTTTGT	NA	False	NA	NA	False	AATAAA	-31	NA	12607650	12594979	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_12595297_12601157_12601399_12601786_12601855_12607290
H1_mix_00083188	chr8	-	790	3	ISM	ENSG00000283674.3	ENST00000637678.1	1770	6	64079	12	4291	3	3prime_fragment	FALSE	canonical	2	9	junction_1	11.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTAATAATTATTTTT	6148	False	NA	NA	False	AATAAA	-29	NA	12601435	12594981	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_-_12595297_12596017_12596215_12601157
H1_mix_00083190	chr8	-	3593	12	NIC	ENSG00000154359.13	novel	3618	12	NA	NA	4	12	combination_of_known_junctions	FALSE	canonical	3	206	junction_7	57.3407964903589	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAGGTCAGTGTTATAAA	-26	True	NA	3	True	AATAAA	-29	NA	12755522	12721893	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_12723255_12725726_12725880_12728900_12729064_12729173_12729333_12731735_12731858_12735285_12735401_12736700_12736765_12736899_12737141_12737994_12738145_12740873_12740997_12743163_12743283_12754699
H1_mix_00083191	chr8	-	3630	12	FSM	ENSG00000154359.13	ENST00000398246.8	3618	12	0	-12	0	12	multi-exon	FALSE	canonical	3	186	junction_7	62.4965453590691	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAGGTCAGTGTTATAAA	-30	True	NA	3	True	AATAAA	-29	NA	12755526	12721893	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_12723255_12725726_12725880_12728900_12729064_12729173_12729333_12731735_12731858_12735285_12735401_12736700_12736798_12736899_12737141_12737994_12738145_12740873_12740997_12743163_12743283_12754699
H1_mix_00083192	chr8	-	1246	8	FSM	ENSG00000154359.13	ENST00000524526.2	1246	8	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_7	65.9084089274422	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTCGACCTCCTGAAT	8224	False	NA	-17	True	AATGAA	-10	NA	12737095	12722980	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_12723255_12725726_12725880_12728900_12729064_12729173_12729333_12731735_12731858_12735285_12735401_12736700_12736765_12736899
H1_mix_00083193	chr8	-	4228	14	FSM	ENSG00000164741.15	ENST00000358919.6	4392	14	164	0	-21	0	multi-exon	FALSE	canonical	3	81	junction_13	12.524059685498	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATTTATGGGTATTTTT	7945	False	NA	NA	False	NA	NA	NA	13133310	13085188	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_13085932_13086289_13086464_13088486_13088705_13090251_13090471_13091317_13091433_13092611_13092826_13094758_13094958_13095085_13095246_13098398_13098576_13099346_13100771_13102789_13102854_13110741_13110824_13115585_13115658_13132943
H1_mix_00083194	chr8	-	6890	7	FSM	ENSG00000198791.12	ENST00000361272.9	6890	7	0	0	0	0	multi-exon	FALSE	canonical	3	1101	junction_1	112.242916133813	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTGTATACAGACTTT	9	True	NA	NA	False	AATAAA	-18	NA	17246857	17224965	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_17230849_17232426_17232538_17234715_17234861_17237211_17237374_17242991_17243186_17245035_17245248_17246674
H1_mix_00083195	chr8	-	1885	6	FSM	ENSG00000198791.12	ENST00000523917.5	1885	6	0	0	0	0	multi-exon	FALSE	canonical	3	1135	junction_3	114.621114983235	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTTTTGTAGCAATGT	-12	True	NA	-67	True	ATTAAA	-17	NA	17246878	17231569	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_17232538_17234715_17234861_17237211_17237374_17242991_17243186_17245035_17245248_17246674
H1_mix_00083201	chr8	-	5110	14	FSM	ENSG00000003987.14	ENST00000180173.10	5110	14	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	4.34734496952147	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATGTGATTATGTAGAAC	10	True	NA	-17	True	AATAAA	-19	NA	17413351	17296793	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_17300225_17302153_17302281_17304378_17304520_17305756_17305958_17309276_17309327_17311510_17311637_17313291_17313402_17331149_17331283_17341362_17341498_17348952_17349082_17361116_17361275_17371036_17371200_17373117_17373241_17413268
H1_mix_00083205	chr8	-	6186	14	NIC	ENSG00000129422.15	novel	6125	15	NA	NA	-225	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_11	4.46153846153846	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATTGCATCCTCTGACC	4611	False	NA	-9	True	AATAAA	-17	NA	17801319	17643803	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_17646140_17646981_17647080_17649845_17649963_17653185_17653282_17653424_17653499_17654560_17654667_17655862_17656066_17675185_17675253_17684327_17684543_17713213_17713253_17715766_17715902_17743603_17743800_17753716_17755962_17801060
H1_mix_00083206	chr8	-	4069	13	FSM	ENSG00000129422.15	ENST00000519263.5	4089	13	20	0	20	0	multi-exon	FALSE	canonical	3	13	junction_11	4.53612046675228	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACGAGAGCATCTTGT	NA	False	NA	NA	False	AAAAAG	-40	NA	17755961	17645661	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_17646140_17646981_17647080_17649845_17649963_17653185_17653282_17653424_17653499_17654560_17654667_17655862_17656066_17675185_17675253_17684327_17684543_17713213_17713253_17715766_17715902_17743603_17743800_17753716
H1_mix_00083207	chr8	-	2507	14	FSM	ENSG00000104763.20	ENST00000381733.9	2512	14	29	-24	2	0	multi-exon	FALSE	canonical	3	20	junction_13	304.389796032972	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATTGGGTGTGTACATC	-12	True	NA	-15	True	AATAAA	-38	NA	18084969	18056430	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18084675
H1_mix_00083208	chr8	-	4987	13	FSM	ENSG00000104763.20	ENST00000637609.1	4981	13	0	-6	0	0	multi-exon	FALSE	canonical	3	355	junction_7	311.410891035551	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTGCCAGTCAGCAGTCA	8	True	NA	-40	True	AATAAA	-13	NA	18084091	18056455	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083980
H1_mix_00083210	chr8	-	3145	14	FSM	ENSG00000104763.20	ENST00000637244.1	3151	14	11	-5	2	0	multi-exon	FALSE	canonical	3	355	junction_7	303.289519344765	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTCCTGACACTCAATAAA	-12	True	NA	-72	True	NA	NA	NA	18084969	18056487	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083980
H1_mix_00083211	chr8	-	1975	13	FSM	ENSG00000104763.20	ENST00000636494.1	1975	13	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_11	273.542653590502	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATAAGTAGCATTCATGTA	-27	True	NA	NA	False	TTTAAA	-4	NA	18084126	18056723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18069791_18069879_18075540_18075588_18083980
H1_mix_00083213	chr8	-	4611	5	FSM	ENSG00000104763.20	ENST00000636435.1	4611	5	0	0	0	0	multi-exon	FALSE	canonical	3	950	junction_2	87.2267160908858	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGGTGAAACCCCGTCT	815	False	NA	NA	False	NA	NA	NA	18084142	18063074	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083980
H1_mix_00083215	chr8	-	918	5	FSM	ENSG00000104763.20	ENST00000518087.7	918	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	451.596335237566	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGGGTGTCTGGGTAC	26	True	NA	-5	True	AATAAA	-24	NA	18084073	18066762	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083916
H1_mix_00083216	chr8	-	867	1	FSM	ENSG00000253384.1	ENST00000517431.1	1119	1	226	26	226	-26	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGAGGAATACTTCGACT	NA	False	NA	NA	False	NA	NA	NA	18089461	18088594	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_18088600_18089500
H1_mix_00083217	chr8	-	11703	16	FSM	ENSG00000156011.18	ENST00000327040.13	11704	16	0	1	0	-1	multi-exon	FALSE	canonical	2	11	junction_5	4.71687278701566	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGAGGGAATGTTTTTAT	26	True	NA	-3	True	AATAAA	-18	NA	19013703	18527303	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_18535959_18556208_18556353_18572527_18572673_18575127_18575286_18600363_18600435_18632612_18632807_18655641_18655686_18765448_18765539_18799294_18799354_18801269_18801383_18804521_18804603_18804703_18804899_18867673_18868070_18871625_18872734_18936033_18936143_19013562
H1_mix_00083220	chr8	-	1513	3	FSM	ENSG00000275074.2	ENST00000611621.2	1513	3	0	0	0	0	multi-exon	TRUE	canonical	3	4	junction_1	1	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCCTCCCTGCCTACAC	-7	True	NA	-14	True	AGTAAA	-14	NA	22109419	22106877	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_22107896_22108132_22108347_22109138
H1_mix_00083221	chr8	-	1744	2	FSM	ENSG00000275074.2	ENST00000613958.1	1754	2	10	0	10	0	multi-exon	FALSE	canonical	3	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCCTGCCTACACGTCT	3	True	NA	-10	True	AGTAAA	-18	NA	22109409	22106873	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_22108347_22109138
H1_mix_00083222	chr8	-	1477	7	FSM	ENSG00000168476.12	ENST00000334530.9	1476	7	0	-1	0	1	multi-exon	FALSE	canonical	0	0	junction_2	98.3033852700687	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTCTCCTGATTCTTAC	37	True	NA	-18	True	AATAAA	-15	NA	22141853	22138018	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_22138553_22138638_22138794_22139415_22139530_22139962_22140084_22140171_22140249_22140624_22140698_22141450
H1_mix_00083224	chr8	-	1216	5	FSM	ENSG00000168476.12	ENST00000519074.5	1212	5	0	-4	0	0	multi-exon	FALSE	canonical	3	215	junction_3	18.9390469665187	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGCCAGGAGGGATGGC	6336	False	NA	NA	False	NA	NA	NA	22141768	22138902	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_22139530_22139962_22140084_22140171_22140249_22140624_22140698_22141450
H1_mix_00083225	chr8	-	2975	5	FSM	ENSG00000168490.14	ENST00000454243.7	2976	5	0	1	0	0	multi-exon	FALSE	canonical	2	9	junction_3	4.58257569495584	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGAGCTGCTGTAACAAA	269	False	22232121	-5	True	AATAAA	-36	NA	22232099	22219703	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_22221888_22224225_22224344_22226850_22227026_22228192_22228387_22231795
H1_mix_00083226	chr8	-	3156	1	FSM	ENSG00000253200.1	ENST00000521025.1	2750	1	149	-555	149	555	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGATCTAATAAATGTTCA	NA	False	NA	NA	False	AAAAAG	-3	NA	22616508	22613352	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_22613400_22616500
H1_mix_00083227	chr8	-	1836	9	FSM	ENSG00000147439.14	ENST00000276416.11	1836	9	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_6	14.8492424049175	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCCAACTTTATATACAAAG	-7	True	NA	NA	False	TTTAAA	-28	NA	22669121	22620417	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_22621569_22623914_22624050_22624221_22624364_22629963_22630005_22630441_22630579_22636524_22636587_22636921_22636963_22644754_22644804_22669043
H1_mix_00083230	chr8	-	3998	9	FSM	ENSG00000120889.13	ENST00000276431.9	3998	9	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_2	27.6043474836845	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGTGGTTTTTGTCTCC	-4	True	NA	NA	False	ATTAAA	-21	NA	23069031	23020132	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_23022985_23024187_23024261_23027132_23027289_23027721_23027754_23028330_23028603_23029609_23029722_23030758_23030873_23043137_23043244_23068750
H1_mix_00083231	chr8	-	1723	10	FSM	ENSG00000120889.13	ENST00000347739.3	1723	10	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_5	53.9851374151108	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCGACTTCACTTGATAC	6	True	NA	-16	True	NA	NA	NA	23069021	23022310	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_23022985_23024187_23024261_23027132_23027289_23027721_23027754_23028330_23028442_23028528_23028603_23029609_23029722_23030758_23030873_23043137_23043244_23068750
H1_mix_00083233	chr8	-	564	3	FSM	ENSG00000120889.13	ENST00000518531.5	564	3	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_2	28	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACAGAAACGCCTGCCCC	NA	False	NA	NA	False	NA	NA	NA	23030872	23028264	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_23028603_23029609_23029722_23030758
H1_mix_00083235	chr8	-	3536	9	FSM	ENSG00000173530.6	ENST00000312584.4	3535	9	0	-1	0	1	multi-exon	FALSE	canonical	3	78	junction_3	16.3152535990097	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTGTTCGTTTATTTC	1	True	NA	NA	False	AATAAA	-23	NA	23164027	23135586	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_23138004_23138187_23138261_23144449_23144636_23145057_23145090_23145667_23145922_23146960_23147073_23148437_23148552_23154873_23154980_23163785
H1_mix_00083236	chr8	-	2690	10	FSM	ENSG00000104689.10	ENST00000221132.8	2690	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	4.36597393430856	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAAAGAATTGCTTCC	3	True	NA	NA	False	NA	NA	NA	23225102	23190451	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_23192014_23197131_23197205_23199265_23199449_23199885_23199918_23200504_23200601_23200686_23200761_23201807_23201920_23202647_23202762_23212115_23212213_23224755
H1_mix_00083238	chr8	-	3742	14	FSM	ENSG00000134013.16	ENST00000389131.8	3721	14	0	-21	0	21	multi-exon	TRUE	canonical	3	192	junction_7	12.4933118201975	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGGGCTGGATGGGAAGTC	0	True	NA	NA	False	NA	NA	NA	23404120	23296875	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_23298123_23298835_23298948_23302026_23302164_23303281_23303398_23309667_23309912_23316948_23317115_23319884_23320053_23322129_23322282_23328381_23328566_23333400_23333624_23340991_23341204_23360089_23360266_23367996_23368435_23403953
H1_mix_00083239	chr8	-	620	4	FSM	ENSG00000134013.16	ENST00000520349.1	620	4	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_3	88.3943185705708	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGAAGCCCCGGCCTCAG	7617	False	NA	NA	False	NA	NA	NA	23333495	23319884	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_23320053_23322129_23322282_23328381_23328587_23333400
H1_mix_00083240	chr8	-	6418	13	NIC	ENSG00000197217.13	novel	5803	13	NA	NA	0	364	combination_of_known_junctions	FALSE	canonical	3	52	junction_2	70.5637517111693	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAATAGTAACAGCAAATG	4	True	NA	NA	False	AATAAA	-20	NA	23457695	23428797	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_23433155_23434316_23434682_23435391_23435478_23436933_23437259_23439748_23439916_23441568_23441724_23442006_23442067_23443849_23443954_23444455_23444607_23447679_23447886_23448741_23448940_23449892_23449998_23457556
H1_mix_00083241	chr8	-	5913	13	FSM	ENSG00000197217.13	ENST00000358689.9	5803	13	0	-110	0	110	multi-exon	FALSE	canonical	3	101	junction_5	47.810098886695	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGCACACTCTTTGCATG	-3	True	NA	76	True	AATACA	-12	NA	23457647	23429051	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_23433155_23434316_23434479_23435391_23435478_23436933_23437259_23439748_23439916_23441568_23441724_23442006_23442067_23443849_23443954_23444455_23444607_23447679_23447886_23448741_23448940_23449892_23449998_23457556
H1_mix_00083243	chr8	-	2063	13	FSM	ENSG00000197217.13	ENST00000417069.6	2063	13	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_5	37.9058592656421	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGCTCACAGCTCCACGA	4	True	NA	NA	False	NA	NA	NA	23457695	23432925	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_23433155_23434316_23434479_23435391_23435478_23436933_23437259_23439748_23439916_23441592_23441724_23442006_23442067_23443849_23443954_23444455_23444607_23447679_23447886_23448741_23448940_23449892_23449998_23457556
H1_mix_00083244	chr8	-	2082	12	FSM	ENSG00000197217.13	ENST00000523958.5	2026	12	-56	0	0	0	multi-exon	FALSE	canonical	3	101	junction_4	49.8525097389563	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTTTGGTTATTCTC	4	True	NA	NA	False	AATACA	-20	NA	23457695	23434092	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_23434479_23435391_23435478_23436933_23437259_23439748_23439916_23441568_23441724_23442006_23442067_23443849_23443954_23444455_23444607_23447679_23447886_23448741_23448940_23449892_23449998_23457556
H1_mix_00083247	chr8	-	3284	2	FSM	ENSG00000167034.10	ENST00000380871.5	3278	2	8	-14	8	14	multi-exon	FALSE	canonical	3	5	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTCAGTTTCCTAAAAAC	10	True	NA	11	True	AATAAA	-35	NA	23682930	23678682	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_23681640_23682603
H1_mix_00083249	chr8	-	3868	4	FSM	ENSG00000159167.12	ENST00000290271.7	3868	4	0	0	0	0	multi-exon	FALSE	canonical	3	520	junction_2	21.9241115365405	183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTTCCCCCCATGTCTT	1	True	NA	-23	True	AATAAA	-14	NA	23854806	23841928	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_23845041_23851319_23851532_23852241_23852385_23854405
H1_mix_00083251	chr8	-	3584	4	FSM	ENSG00000277586.4	ENST00000610854.2	3584	4	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	7.31816613336672	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGCTTAAAGTCTTTTTT	-1	True	NA	0	True	AATAAA	-18	NA	24956612	24950954	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_24952953_24953475_24953796_24954180_24954306_24955471
H1_mix_00083252	chr8	-	1844	1	FSM	ENSG00000277586.4	ENST00000615973.1	1497	1	-396	49	-396	-49	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGCTGCTGCACCGGCG	NA	False	NA	NA	False	NA	NA	NA	24957117	24955273	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_24955300_24957100
H1_mix_00083253	chr8	-	3367	12	FSM	ENSG00000104756.16	ENST00000221200.9	3367	12	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_11	10.2908127203968	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTATTTTTATCATTC	-11	True	NA	-4	True	ATTAAA	-20	NA	25458433	25427846	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_25429974_25432503_25432638_25433329_25433436_25435362_25435513_25436234_25436331_25436417_25436486_25439278_25439408_25439605_25439665_25440576_25440674_25444291_25444336_25446128_25446251_25458198
H1_mix_00083254	chr8	-	3167	2	FSM	ENSG00000228451.4	ENST00000519902.1	3174	2	0	7	0	-7	multi-exon	FALSE	canonical	2	7	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAAAATGTGGCAGCAATT	8348	False	NA	-3	True	ATTAAA	-31	NA	26382953	26379265	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_26381867_26382387
H1_mix_00083255	chr8	-	4742	3	FSM	ENSG00000240694.9	ENST00000522362.7	4730	3	0	-12	0	12	multi-exon	TRUE	canonical	3	25	junction_1	0.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTCCTATATCGTGGTC	1	True	NA	-9	True	AATAAA	-28	NA	26513872	26504688	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_26509244_26509547_26509678_26513815
H1_mix_00083256	chr8	-	569	3	FSM	ENSG00000240694.9	ENST00000521740.1	576	3	7	0	-4	0	multi-exon	FALSE	canonical	1	1	junction_1	12.5	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGCACCACTAACAAATTG	-3	True	NA	NA	False	NA	NA	NA	26513876	26508812	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_26509244_26509600_26509678_26513815
H1_mix_00083257	chr8	-	7906	6	FSM	ENSG00000104228.13	ENST00000305364.9	4183	6	34	-3757	0	3757	multi-exon	TRUE	canonical	3	57	junction_3	5.63560112144215	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCACTCACTCCTCCTC	18	True	NA	NA	False	NA	NA	NA	27311238	27281128	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_27288128_27289161_27289281_27290155_27290179_27294079_27294311_27298463_27298560_27310800
H1_mix_00083258	chr8	-	2565	9	FSM	ENSG00000120885.22	ENST00000316403.15	2749	9	0	184	0	-184	multi-exon	FALSE	canonical	3	1514	junction_4	184.220613328151	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCTTATGTCCAAGGTAA	0	True	NA	NA	False	TATAAA	-16	NA	27614700	27597100	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_27598251_27598459_27598636_27599779_27600010_27604290_27604396_27604923_27605336_27606353_27606525_27608937_27609087_27610474_27610601_27614654
H1_mix_00083260	chr8	-	2807	8	FSM	ENSG00000120885.22	ENST00000522299.5	2807	8	0	0	0	0	multi-exon	FALSE	canonical	3	1514	junction_3	195.744523211626	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTTGGAGGGTCCTCTTT	7	True	NA	-28	True	AATAAA	-18	NA	27614693	27597995	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_27598251_27598459_27600010_27604290_27604396_27604923_27605336_27606353_27606525_27608937_27609087_27610474_27610601_27614654
H1_mix_00083262	chr8	-	654	5	FSM	ENSG00000120885.22	ENST00000522413.5	654	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	1051.39868151905	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGCTCAGGCCTGGTTG	8	True	NA	NA	False	NA	NA	NA	27614692	27606381	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_27606525_27608937_27609087_27610474_27610601_27614172_27614371_27614654
H1_mix_00083263	chr8	-	3471	7	FSM	ENSG00000147419.19	ENST00000520202.5	1734	7	0	-1737	0	1	multi-exon	FALSE	canonical	3	35	junction_3	186.390867682823	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTGAGAGAGATTT	-19	True	NA	-10	True	AATAAA	-22	NA	27772639	27733314	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_27736246_27740471_27740518_27748076_27748280_27752511_27752588_27762418_27762459_27765203_27765252_27772512
H1_mix_00083265	chr8	-	3587	8	FSM	ENSG00000147419.19	ENST00000520486.5	3586	8	2	-3	2	1	multi-exon	FALSE	canonical	3	120	junction_5	123.601235050959	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTGAGAGAGATTT	-31	True	NA	-10	True	AATAAA	-22	NA	27772651	27733314	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_27736246_27740471_27740518_27748076_27748280_27748494_27748599_27752511_27752588_27762418_27762459_27765203_27765252_27772512
H1_mix_00083266	chr8	-	977	8	FSM	ENSG00000147419.19	ENST00000519509.5	977	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	148.729723365052	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCTTGAAACACTTTTCA	-20	True	NA	32	True	AAAACA	-2	NA	27772640	27735861	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_27736246_27740471_27740518_27748076_27748280_27752511_27752588_27756718_27756771_27762418_27762459_27765203_27765252_27772512
H1_mix_00083267	chr8	-	1842	8	FSM	ENSG00000168078.10	ENST00000301905.9	1836	8	0	-6	0	6	multi-exon	FALSE	canonical	3	81	junction_3	14.8516473352766	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCAGCATTATTTTATAC	-14	True	NA	-18	True	AATAAA	-24	NA	27837817	27809617	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_27810502_27810957_27811135_27820564_27820695_27822318_27822489_27823062_27823206_27828104_27828199_27833055_27833134_27837651
H1_mix_00083268	chr8	-	1839	8	NIC	ENSG00000168078.10	novel	1836	8	NA	NA	-61	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_7	32.4030736763269	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGTGTCTCAGCATTATT	170	False	NA	-24	True	AATAAA	-44	NA	27837878	27809623	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_27810502_27810957_27811135_27820564_27820695_27822318_27822489_27823062_27823206_27828104_27828199_27833055_27833134_27837709
H1_mix_00083270	chr8	-	1790	10	FSM	ENSG00000186918.14	ENST00000523095.5	1790	10	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_9	18.0233045297703	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGCGAACATTTTATTTT	788	False	NA	-11	True	NA	NA	NA	28386073	28348558	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_28348831_28349124_28349229_28350063_28350157_28351494_28351808_28352572_28352674_28353172_28353409_28356669_28356780_28359591_28359825_28360884_28361143_28386003
H1_mix_00083272	chr8	-	1136	8	NIC	ENSG00000214050.8	novel	1254	9	NA	NA	-8	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	24.3896933735778	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTGGACAGATTTACGGA	-1	True	NA	-47	True	AGTAAA	-18	NA	28490245	28428409	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_28428737_28447170_28447274_28452243_28452367_28456765_28456931_28463611_28463819_28473771_28473808_28483347_28483463_28490185
H1_mix_00083274	chr8	-	2574	18	NNC	ENSG00000104299.15	novel	2549	17	NA	NA	0	99336	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	47.4575752992839	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAACAACTCTGGAAAGAAA	-20	True	NA	NA	False	NA	NA	NA	28889969	28668324	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_28668350_28767660_28768323_28769888_28770027_28770981_28771081_28775758_28775927_28777828_28777954_28780822_28780995_28787828_28787890_28793806_28793988_28796543_28796656_28812326_28812462_28813491_28813613_28835291_28835379_28837636_28837777_28846746_28846810_28850212_28850274_28859435_28859564_28889873
H1_mix_00083275	chr8	-	2549	17	FSM	ENSG00000104299.15	ENST00000521022.6	2549	17	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_7	23.7841859225831	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTCCTCTGTTGAAC	-20	True	NA	-5	True	AATAAA	-18	NA	28889969	28767660	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_28768323_28769888_28770027_28770981_28771081_28775758_28775927_28777828_28777954_28780822_28780995_28787828_28787890_28793806_28793988_28796543_28796656_28812326_28812462_28813491_28813613_28835291_28835379_28837636_28837777_28846746_28846810_28850212_28850274_28859435_28859564_28889873
H1_mix_00083276	chr8	-	2723	16	FSM	ENSG00000104299.15	ENST00000416984.6	2759	16	36	0	36	0	multi-exon	FALSE	canonical	3	9	junction_13	47.421514104887	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTCCTCTGTTGAAC	-2	True	NA	-5	True	AATAAA	-18	NA	28890206	28767660	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_28768323_28769888_28770027_28770981_28771081_28775758_28775927_28777828_28777954_28780822_28780995_28787828_28787890_28793806_28793988_28796543_28796656_28812326_28812462_28813491_28813613_28835291_28835379_28837636_28837777_28850212_28850274_28859435_28859564_28889873
H1_mix_00083277	chr8	-	8743	40	FSM	ENSG00000197892.13	ENST00000524189.6	8743	40	0	0	0	0	multi-exon	TRUE	canonical	2	11	junction_29	6.04171342565052	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTCTGAGGCCAGTCTT	1	True	NA	-9	True	AATAAA	-23	NA	29263070	29067277	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_29070767_29071619_29072317_29075280_29075344_29092744_29092879_29099132_29099242_29108138_29108193_29109433_29109512_29109917_29110071_29113462_29113556_29116830_29117008_29118867_29118993_29122590_29122647_29123365_29123493_29124023_29124124_29126481_29126512_29127121_29127269_29130532_29130666_29132307_29132466_29134039_29134211_29140062_29140192_29140467_29140618_29142156_29142304_29146377_29146541_29147391_29147603_29148576_29148768_29150296_29150384_29155725_29155857_29160732_29160868_29165661_29165773_29167372_29167586_29176067_29176180_29177465_29177579_29180103_29180239_29181918_29182007_29186291_29186473_29188514_29188608_29190996_29191058_29196186_29196200_29245345_29245440_29262979
H1_mix_00083281	chr8	-	336	1	FSM	ENSG00000260253.1	ENST00000567818.1	751	1	428	-13	428	13	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCATCGTAAGCCATTTTG	NA	False	NA	NA	False	AATAAA	-36	NA	29352742	29352406	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_29352400_29352700
H1_mix_00083282	chr8	-	2020	6	FSM	ENSG00000133872.14	ENST00000256255.11	2020	6	0	0	0	0	multi-exon	FALSE	canonical	3	713	junction_5	149.128669275897	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGTCTCCCTAAACAGT	2	True	NA	2	True	TTTAAA	-34	NA	30083064	30063002	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_30063914_30065987_30066140_30066776_30066919_30069641_30070060_30073876_30074056_30082846
H1_mix_00083284	chr8	-	2076	6	FSM	ENSG00000133872.14	ENST00000518174.5	1981	6	0	-95	0	0	multi-exon	FALSE	canonical	3	35	junction_5	394.550072867817	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGTCTCCCTAAACAGT	206	False	NA	2	True	TTTAAA	-34	NA	30083124	30063002	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_30063914_30065987_30066140_30066776_30066919_30069641_30070060_30073876_30074052_30082846
H1_mix_00083285	chr8	-	1741	6	FSM	ENSG00000133872.14	ENST00000521265.5	1741	6	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	297.31760795486	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAATCAATAAAAACA	382	False	NA	-39	True	NA	NA	NA	30082948	30063125	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_30063914_30066027_30066140_30066776_30066919_30069641_30070060_30073876_30074056_30082846
H1_mix_00083287	chr8	-	396	1	FSM	ENSG00000241511.1	ENST00000492525.1	396	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGTAATGCAGCATATAT	27	False	NA	NA	False	AAAACA	-35	NA	30117779	30117383	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_30117400_30117800
H1_mix_00083290	chr8	-	1821	8	FSM	ENSG00000197265.9	ENST00000355904.9	1747	8	0	-74	0	74	multi-exon	FALSE	canonical	3	311	junction_2	29.352189363115	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGAGGCTGAGGCAGGT	-19	True	NA	74	True	NA	NA	NA	30658236	30578243	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_30579038_30580280_30580397_30607056_30607151_30612298_30612482_30614607_30614716_30635031_30635124_30653432_30653603_30657972
H1_mix_00083291	chr8	-	3034	13	FSM	ENSG00000104687.14	ENST00000221130.11	3034	13	0	0	0	0	multi-exon	FALSE	canonical	3	526	junction_11	47.0805308900493	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATTTGTTACTGTGAGC	-23	True	NA	-23	True	AATAAA	-21	NA	30727846	30678065	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_30679670_30680903_30681038_30681929_30682062_30684087_30684200_30689160_30689320_30692968_30693056_30696379_30696480_30700080_30700136_30703092_30703241_30708071_30708142_30709813_30709903_30712061_30712089_30727529
H1_mix_00083292	chr8	-	1952	7	FSM	ENSG00000104695.13	ENST00000221138.9	1946	7	0	-6	0	6	multi-exon	FALSE	canonical	3	346	junction_5	22.3215142855497	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTGTGTTGTGCATTAA	-13	True	NA	-4	True	AATAAA	-27	NA	30812818	30785609	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_30786308_30791196_30791316_30793916_30794079_30794191_30794282_30797580_30797755_30799545_30799756_30812319
H1_mix_00083293	chr8	-	10110	4	FSM	ENSG00000133863.9	ENST00000256246.5	10110	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	0.471404520791032	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGTTTTTTGATTCTA	NA	False	NA	NA	False	ATTAAA	-21	NA	30849017	30831545	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_30833324_30836802_30838062_30839905_30839965_30842003
H1_mix_00083295	chr8	-	820	1	FSM	ENSG00000172733.12	ENST00000475541.2	2866	1	83	1963	83	-1963	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTCTGTTTGTTACTT	131	False	NA	NA	False	NA	NA	NA	31033632	31032812	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_31032800_31033600
H1_mix_00083297	chr8	-	3823	5	FSM	ENSG00000172728.16	ENST00000327671.10	3549	5	55	-329	0	329	multi-exon	FALSE	canonical	3	74	junction_1	18.7399973319102	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTTTAAGAAAGCAACGT	33	True	NA	35	True	NA	NA	NA	33473091	33370494	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_33372805_33388962_33389799_33453215_33453511_33461371_33461726_33473063
H1_mix_00083300	chr8	-	2481	8	FSM	ENSG00000129696.13	ENST00000613904.1	2516	8	35	0	-15	0	multi-exon	FALSE	canonical	3	10	junction_7	101.210429405315	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTTCTTCCTCCTCCTC	-27	True	NA	NA	False	NA	NA	NA	33513150	33498508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_33499278_33500327_33500491_33503428_33503573_33503747_33503936_33507228_33507322_33509745_33509933_33511966_33512713_33512959
H1_mix_00083301	chr8	-	2131	8	FSM	ENSG00000129696.13	ENST00000431156.7	2131	8	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_7	73.7405822419904	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAAACTGGAGGTGTGTA	-12	True	NA	-2	True	AATAAA	-35	NA	33513135	33498721	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_33499278_33500327_33500491_33503428_33503573_33503747_33503936_33507228_33507322_33509745_33509933_33511966_33512713_33513081
H1_mix_00083302	chr8	-	2474	7	FSM	ENSG00000129696.13	ENST00000360742.9	2242	7	0	-232	0	0	multi-exon	FALSE	canonical	3	216	junction_4	42.0317340430616	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAAACTGGAGGTGTGTA	14	True	NA	-2	True	AATAAA	-35	NA	33513109	33498721	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_33499278_33500327_33500491_33503428_33503573_33503747_33503936_33507228_33507322_33509745_33509933_33511966
H1_mix_00083303	chr8	-	1588	6	FSM	ENSG00000129696.13	ENST00000520636.5	1588	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	106.437963152251	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGGAGTTATTTAAGAAAA	411	False	NA	-73	True	NA	NA	NA	33512712	33499117	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_33499278_33500327_33500491_33503428_33503573_33503747_33503936_33509745_33509933_33511966
H1_mix_00083304	chr8	-	1872	6	FSM	ENSG00000133874.2	ENST00000256257.2	1872	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	3.05941170815567	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGCTTGTGGTTGTGGC	-2	True	NA	-1	True	AATAAA	-26	NA	33567128	33547753	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_33548868_33549409_33549493_33551043_33551086_33551343_33551390_33558614_33558772_33566698
H1_mix_00083305	chr8	-	1754	4	FSM	ENSG00000133878.9	ENST00000256261.9	1754	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	11.4309521329882	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTTTCTTGAAGTCATT	-41	True	NA	-3	True	AATAAA	-16	NA	33600023	33591329	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_33592213_33593532_33593748_33597294_33597592_33599664
H1_mix_00083307	chr8	-	588	1	FSM	ENSG00000232024.2	ENST00000411836.1	588	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCGTACACATGGAGGACT	6	True	NA	NA	False	NA	NA	NA	35525763	35525175	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_35525200_35525800
H1_mix_00083308	chr8	-	2583	4	FSM	ENSG00000104221.13	ENST00000220659.11	2560	4	0	-23	0	23	multi-exon	TRUE	canonical	3	91	junction_2	7.40870359029762	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAAAAGTAACTGCTTCT	3	True	NA	NA	False	NA	NA	NA	37849861	37843244	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_37845214_37846853_37847176_37848595_37848656_37849629
H1_mix_00083309	chr8	-	5925	5	FSM	ENSG00000156675.16	ENST00000287263.8	6253	5	0	328	0	-328	multi-exon	FALSE	canonical	3	91	junction_2	20.8925824157762	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCTGTAGTTTGGTAT	24	False	NA	2	True	AATAAA	-23	NA	37899467	37858945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_37863114_37870419_37870529_37874514_37875323_37877108_37877552_37899070
H1_mix_00083310	chr8	-	7857	6	FSM	ENSG00000156675.16	ENST00000330843.9	8185	6	0	328	0	-328	multi-exon	FALSE	canonical	3	22	junction_3	49.818069011153	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCTGTAGTTTGGTAT	-6	True	NA	2	True	AATAAA	-23	NA	37899497	37858945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_37863114_37870419_37870529_37871277_37873180_37874514_37875323_37877108_37877552_37899070
H1_mix_00083311	chr8	-	1235	1	FSM	ENSG00000188778.6	ENST00000520341.2	1624	1	2	387	2	-387	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGCGCCGCCGCCCGCC	3	True	NA	NA	False	NA	NA	NA	37966595	37965360	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_37965400_37966600
H1_mix_00083312	chr8	-	2589	7	FSM	ENSG00000147465.12	ENST00000276449.9	2565	7	0	-24	0	24	multi-exon	FALSE	canonical	3	13	junction_1	3.44802681092953	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTGTAATCCCAGCTAC	-1	True	NA	NA	False	AATACA	-24	NA	38150952	38142675	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38144387_38145221_38145316_38145962_38146148_38146288_38146448_38148199_38148328_38148640_38148755_38150754
H1_mix_00083313	chr8	-	917	4	FSM	ENSG00000175324.10	ENST00000311351.9	906	4	0	-11	0	7	multi-exon	FALSE	canonical	3	531	junction_1	20.5101600838869	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCAAGTTTGAGTTACCT	-14	True	NA	-5	True	AATAAA	-27	NA	38176493	38163327	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38163841_38169801_38169918_38171964_38172034_38176274
H1_mix_00083314	chr8	-	982	3	FSM	ENSG00000175324.10	ENST00000520755.5	975	3	0	-7	0	7	multi-exon	FALSE	canonical	3	44	junction_1	265.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCAAGTTTGAGTTACCT	54	False	NA	-5	True	AATAAA	-27	NA	38176674	38163327	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38163841_38171964_38172034_38176274
H1_mix_00083315	chr8	-	776	4	FSM	ENSG00000175324.10	ENST00000520286.5	776	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	230.752874064201	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTTCTTTATATTGTTC	-2	True	NA	76	True	AAGAAA	-42	NA	38176730	38163427	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38163841_38169801_38169918_38171964_38172034_38176552
H1_mix_00083316	chr8	-	12796	25	NNC	ENSG00000147548.17	novel	10768	24	NA	NA	0	12466	intron_retention	FALSE	non_canonical	0	0	junction_1	141.631411054265	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGGCCAGATATGGTGG	-25	True	NA	NA	False	NA	NA	NA	38382271	38257237	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_38257265_38269698_38275883_38276295_38276501_38278305_38278413_38279539_38279682_38281466_38281584_38288486_38288757_38289392_38289506_38290474_38290678_38295795_38295953_38299443_38299591_38304586_38304758_38305247_38305446_38314646_38314774_38315415_38315545_38315911_38318039_38318894_38318941_38321071_38321173_38326729_38326857_38329377_38329894_38331430_38331586_38337304_38337468_38338535_38338608_38347496_38348216_38381798
H1_mix_00083317	chr8	-	505	3	FSM	ENSG00000147535.17	ENST00000530193.5	496	3	0	-9	0	1	multi-exon	FALSE	canonical	3	30	junction_1	116.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAATGTGTGCTTTTTTA	1876	False	NA	-19	True	AATAAA	-3	NA	38267322	38263128	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38263407_38266140_38266312_38267266
H1_mix_00083318	chr8	-	2186	6	FSM	ENSG00000147535.17	ENST00000529359.5	2185	6	0	-1	0	1	multi-exon	FALSE	canonical	3	168	junction_1	141.473672462406	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAATGTGTGCTTTTTTA	-7	True	NA	-19	True	AATAAA	-3	NA	38269140	38263128	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38264605_38266140_38266312_38267266_38267392_38267896_38267961_38268370_38268462_38268881
H1_mix_00083319	chr8	-	2461	7	FSM	ENSG00000147535.17	ENST00000424479.7	2134	7	-326	-1	-307	1	multi-exon	FALSE	canonical	3	168	junction_1	135.839877142989	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAATGTGTGCTTTTTTA	NA	False	NA	-19	True	AATAAA	-3	NA	38269550	38263128	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38264605_38266140_38266312_38267266_38267392_38267896_38267961_38268370_38268462_38268881_38268991_38269125
H1_mix_00083320	chr8	-	831	7	FSM	ENSG00000147535.17	ENST00000524616.5	831	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	193.638336998528	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCAACATGGTGAACCCT	2	True	NA	NA	False	NA	NA	NA	38269196	38264350	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38264605_38266140_38266312_38267266_38267392_38267896_38267961_38268370_38268408_38268881_38268991_38269125
H1_mix_00083321	chr8	-	853	7	FSM	ENSG00000147535.17	ENST00000422581.6	853	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	172.937368238716	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAAGTCTGGAATTGAGG	-9	True	NA	-4	True	AATAAA	-18	NA	38269207	38264738	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38264950_38266140_38266312_38267266_38267392_38267896_38267961_38268370_38268462_38268881_38268991_38269125
H1_mix_00083322	chr8	-	794	5	FSM	ENSG00000147535.17	ENST00000419686.2	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_3	59.1121814857141	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTATGTGTCAGGTACT	NA	False	NA	-17	True	AATAAA	-18	NA	38269243	38266979	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38267392_38267896_38267961_38268370_38268462_38268881_38268991_38269125
H1_mix_00083323	chr8	-	1611	3	FSM	ENSG00000147535.17	ENST00000528814.1	1590	3	0	-21	0	0	multi-exon	FALSE	canonical	3	485	junction_2	42.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTATGTGTCAGGTACT	-32	True	NA	-17	True	AATAAA	-18	NA	38269230	38266979	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38267392_38267896_38268991_38269125
H1_mix_00083325	chr8	-	10773	24	FSM	ENSG00000147548.17	ENST00000317025.13	10768	24	0	-5	0	5	multi-exon	FALSE	canonical	3	19	junction_14	141.891755649724	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGGGCTTGTTCTTTGC	-25	True	NA	NA	False	AATAAA	-25	NA	38382271	38269698	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38275883_38276295_38276501_38278305_38278413_38279539_38279682_38281466_38281584_38288486_38288757_38289392_38289506_38290474_38290678_38295795_38295953_38299443_38299591_38304586_38304758_38305247_38305446_38314646_38314774_38315415_38315545_38315911_38316043_38318894_38318941_38321071_38321173_38326729_38326857_38329377_38329894_38331430_38331586_38337304_38337468_38338535_38338608_38347496_38348216_38381798
H1_mix_00083326	chr8	-	4471	24	FSM	ENSG00000147548.17	ENST00000527502.5	4471	24	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	142.519537346709	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAACTGCCTTATTAAAGCA	4503	False	NA	-52	True	AAAAAG	-36	NA	38381846	38275542	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38275883_38276295_38276501_38278305_38278413_38279539_38279682_38281499_38281584_38288486_38288757_38289392_38289506_38290474_38290678_38295795_38295953_38299443_38299591_38304586_38304758_38305247_38305446_38314646_38314774_38315415_38315545_38315911_38316043_38318894_38318941_38321071_38321173_38326729_38326857_38329377_38329894_38331430_38331586_38337304_38337468_38338535_38338608_38347496_38348216_38381798
H1_mix_00083327	chr8	-	4205	10	FSM	ENSG00000147548.17	ENST00000316985.7	3995	10	1	-211	0	211	multi-exon	FALSE	canonical	3	246	junction_1	29.6760284854066	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTTCTGAAGTTTTGACT	-25	True	NA	NA	False	ATTAAA	-23	NA	38382271	38316205	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38318039_38318894_38318941_38321071_38321173_38326729_38326857_38329377_38329894_38331430_38331586_38337304_38337468_38338535_38338608_38347496_38348216_38381798
H1_mix_00083328	chr8	-	1524	2	FSM	ENSG00000147548.17	ENST00000528627.1	1524	2	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACAATCCTTAAATATTT	4699	False	NA	-19	True	AATAAA	-19	NA	38326835	38319754	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38321173_38326729
H1_mix_00083330	chr8	-	4442	18	FSM	ENSG00000077782.22	ENST00000341462.9	4442	18	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	290.685170781226	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTGAGAGAAAATGAAATGG	5	True	NA	-4	True	AATAAA	-16	NA	38468601	38411142	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38412596_38413917_38414024_38414151_38414290_38414558_38414630_38414778_38414902_38415869_38416061_38417305_38417417_38417869_38417992_38418227_38418374_38419538_38419736_38421796_38421942_38424508_38424700_38426121_38426246_38427920_38428094_38428351_38428436_38429681_38429949_38457355_38457535_38467980
H1_mix_00083331	chr8	-	5590	18	FSM	ENSG00000077782.22	ENST00000532791.5	5590	18	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_9	255.636176374316	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGATGTCCTTGCTGTTA	12	False	NA	-92	True	AATATA	-18	NA	38468622	38411230	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38413805_38413917_38414024_38414151_38414290_38414558_38414630_38414778_38414902_38415869_38416061_38417305_38417417_38417869_38417992_38418227_38418374_38419538_38419736_38421796_38421942_38424508_38424700_38426121_38426246_38427920_38428094_38428345_38428436_38429681_38429949_38457355_38457535_38467980
H1_mix_00083332	chr8	-	4106	15	NNC	ENSG00000077782.22	novel	3816	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	285.671684323963	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATACAAAAGAAAGTTCAAT	1279	False	NA	-40	True	ATTAAA	-27	NA	38428435	38411626	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_38413805_38413917_38414024_38414151_38414290_38414558_38414630_38414778_38414902_38415869_38416061_38417305_38417417_38417869_38417992_38418227_38418373_38419531_38419736_38421796_38421942_38424508_38424700_38426121_38426246_38427920_38428094_38428351
H1_mix_00083333	chr8	-	5205	18	NNC	ENSG00000077782.22	novel	4094	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	260.158149931496	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATACAAAAGAAAGTTCAAT	1	True	NA	-40	True	ATTAAA	-27	NA	38468633	38411626	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_38413805_38413917_38414024_38414151_38414290_38414558_38414630_38414778_38414902_38415869_38416061_38417305_38417417_38417869_38417992_38418227_38418373_38419531_38419736_38421796_38421942_38424508_38424700_38426121_38426246_38427920_38428094_38428351_38428436_38429681_38429949_38457355_38457535_38467980
H1_mix_00083334	chr8	-	4094	18	FSM	ENSG00000077782.22	ENST00000683815.1	4094	18	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_9	233.062089830721	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTATCTATGGGCTGTAT	1	True	NA	-21	True	AATAAA	-15	NA	38468633	38412731	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38413805_38413917_38414024_38414151_38414290_38414558_38414630_38414778_38414902_38415869_38416061_38417305_38417417_38417869_38417992_38418227_38418374_38419538_38419736_38421796_38421942_38424508_38424700_38426121_38426246_38427920_38428094_38428351_38428436_38429681_38429949_38457355_38457535_38467980
H1_mix_00083337	chr8	-	4028	9	FSM	ENSG00000077782.22	ENST00000524528.2	4028	9	0	0	0	0	multi-exon	FALSE	canonical	3	846	junction_7	67.0615389027123	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTACATGTCTTTTTAAA	9164	False	NA	-5	True	TATAAA	-11	NA	38420550	38412961	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38413805_38413917_38414024_38414151_38414290_38414558_38414630_38414778_38414902_38415869_38416061_38417305_38417417_38417869_38417992_38418227
H1_mix_00083340	chr8	-	540	1	FSM	ENSG00000253570.1	ENST00000524091.1	540	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTATGTCTGCTTCCCGCCC	37	False	NA	NA	False	NA	NA	NA	38601200	38600660	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38600700_38601200
H1_mix_00083341	chr8	-	3239	4	FSM	ENSG00000169490.17	ENST00000456397.7	3239	4	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_3	82.9832647117611	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGGCACTGTGTTCTT	-3	True	NA	0	True	AATAAA	-21	NA	38996509	38988807	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38991546_38993544_38993661_38995317_38995406_38996212
H1_mix_00083342	chr8	-	3407	4	NIC	ENSG00000169490.17	novel	3295	4	NA	NA	0	-4	intron_retention	FALSE	canonical	3	36	junction_3	218.445009607046	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATTTCCTGGCACTGTGT	8	True	NA	-4	True	AATAAA	-17	NA	38996498	38988811	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_38991546_38993544_38993661_38995317_38995795_38996418
H1_mix_00083343	chr8	-	469	4	FSM	ENSG00000169490.17	ENST00000522434.5	469	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	213.264051249983	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCCAAGTGATGGCAGCA	-3	True	NA	NA	False	NA	NA	NA	38996509	38991371	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38991546_38993544_38993661_38995317_38995406_38996418
H1_mix_00083344	chr8	-	2471	7	FSM	ENSG00000165061.15	ENST00000297737.11	2471	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	9.65516557197349	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTTCAGTTTGGGTTT	-3	True	NA	NA	False	AGTAAA	-20	NA	40897826	40530589	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_40532239_40581164_40581262_40674703_40674932_40697244_40697402_40767640_40767731_40825574_40825681_40897682
H1_mix_00083345	chr8	-	10066	6	FSM	ENSG00000165061.15	ENST00000315769.11	2250	6	9	-7825	0	7825	multi-exon	TRUE	canonical	1	7	junction_2	17.9666357451806	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATAGAAGGAATGTATCTC	-1	True	NA	NA	False	AATAAA	-17	NA	40897824	40522764	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_40532239_40581164_40581262_40697244_40697402_40767640_40767731_40825574_40825681_40897682
H1_mix_00083347	chr8	-	4469	3	FSM	ENSG00000104332.12	ENST00000220772.8	4464	3	0	-5	0	5	multi-exon	FALSE	canonical	3	1654	junction_1	48	638	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGAGCTGTGACTTTTTT	-16	True	NA	-5	True	ACTAAA	-23	NA	41309473	41261956	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_41265490_41303460_41303539_41308615
H1_mix_00083349	chr8	-	8218	42	NNC	ENSG00000029534.21	novel	8237	42	NA	NA	30154	-1	intron_retention	TRUE	canonical	2	4	junction_1	4.46148165527785	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGGCTCTATCTCTCCTT	400	False	NA	-5	True	AATAAA	-17	NA	41767439	41653225	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_41655754_41661800_41661942_41663658_41663743_41668266_41668565_41672353_41672913_41684543_41684691_41686151_41686284_41688155_41688231_41688510_41688590_41690226_41690347_41690473_41690600_41692647_41692877_41693104_41693202_41693897_41694103_41694591_41694804_41695176_41695332_41696362_41696588_41696675_41696774_41698042_41698122_41699451_41699549_41701549_41701623_41702051_41702145_41704040_41704140_41704373_41704473_41706142_41706242_41708777_41708976_41714155_41714255_41714975_41715075_41715651_41715850_41716952_41717052_41717603_41717703_41718105_41718205_41719660_41719859_41723124_41723224_41723534_41723634_41724455_41724555_41725760_41725947_41727249_41727349_41727907_41728007_41733970_41734070_41758035_41758138_41767341
H1_mix_00083350	chr8	-	1859	1	FSM	ENSG00000260588.1	ENST00000563810.1	1770	1	-129	40	-129	-40	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGCAGCCTTTCATAGGAA	NA	False	NA	NA	False	NA	NA	NA	41830063	41828204	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_41828200_41830100
H1_mix_00083351	chr8	-	9214	17	FSM	ENSG00000083168.11	ENST00000265713.8	9153	17	-61	0	-54	0	multi-exon	FALSE	canonical	3	10	junction_8	4.09219913371771	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCTTGCATGTGGAA	429	False	NA	0	True	AATAAA	-21	NA	42052048	41929478	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_41934868_41937255_41937569_41940841_41941445_41942792_41943001_41943747_41943980_41946590_41946685_41947750_41947913_41949221_41949364_41955295_41955412_41974703_41974823_41977007_41977328_41978641_41978778_41980845_41980928_41981838_41981955_41987454_41987564_42048377_42049303_42051900
H1_mix_00083352	chr8	-	8004	18	FSM	ENSG00000083168.11	ENST00000396930.4	8006	18	2	0	-1	0	multi-exon	FALSE	canonical	3	4	junction_17	5.21244186279429	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAGGTAAAAAAAAAAAAAA	-2	True	NA	NA	False	NA	NA	NA	42051988	41930760	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_41934868_41937255_41937569_41940841_41941445_41942792_41943001_41943747_41943980_41946590_41946685_41947750_41947913_41949221_41949364_41955295_41955412_41974703_41974823_41977007_41977328_41978641_41978778_41980845_41980928_41981838_41981955_41987454_41987564_42048377_42049303_42049575_42049708_42051900
H1_mix_00083353	chr8	-	809	1	FSM	ENSG00000271938.1	ENST00000605981.1	292	1	-518	1	-518	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGTCTAATGAGATGTG	7	True	NA	NA	False	AATAAA	-16	NA	42140270	42139461	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_42139500_42140300
H1_mix_00083355	chr8	-	3755	11	FSM	ENSG00000168575.10	ENST00000520262.6	3752	11	0	-3	0	3	multi-exon	FALSE	canonical	3	11	junction_10	35.2958921122558	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCTGAAGCCTTTTTCT	15	True	NA	-7	True	AATAAA	-19	NA	42501231	42416471	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_42417968_42428757_42428843_42430063_42430250_42436988_42437578_42439449_42439654_42444645_42444763_42459895_42459993_42463004_42463091_42465776_42465918_42472101_42472655_42501030
H1_mix_00083357	chr8	-	3752	11	NIC	ENSG00000168575.10	novel	3752	11	NA	NA	-27	0	combination_of_known_splicesites	FALSE	canonical	3	76	junction_10	20.7376469253385	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCCTCTGAAGCCTTTT	407	False	NA	-10	True	AATAAA	-16	NA	42541738	42416474	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_42417968_42428757_42428843_42430063_42430250_42436988_42437578_42439449_42439654_42444645_42444763_42459895_42459993_42463004_42463091_42465776_42465918_42472101_42472655_42541537
H1_mix_00083358	chr8	-	2251	2	FSM	ENSG00000168575.10	ENST00000523340.1	1265	2	-9	-977	0	977	multi-exon	FALSE	canonical	3	25	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CGTCTCAAAAAAAAAAAAAA	-6	True	NA	NA	False	NA	NA	NA	42541512	42533682	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_42535336_42540914
H1_mix_00083359	chr8	-	1992	2	FSM	ENSG00000168575.10	ENST00000519463.1	388	2	-72	-1532	-72	1005	multi-exon	FALSE	canonical	3	22	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAGTTGATCATTAAGGC	5480	False	NA	NA	False	NA	NA	NA	42536665	42533654	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_42535336_42536354
H1_mix_00083362	chr8	-	4373	7	FSM	ENSG00000120925.16	ENST00000534961.5	4116	7	-259	2	-259	-2	multi-exon	FALSE	canonical	3	28	junction_6	31.427164470672	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAGGTGTTATTTTTCTG	310	False	NA	-13	True	AATAAA	-21	NA	42896982	42853298	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_42856429_42861744_42861856_42865415_42865490_42870003_42870113_42873930_42874007_42887727_42887872_42896253
H1_mix_00083363	chr8	-	2023	6	FSM	ENSG00000120925.16	ENST00000240159.8	2023	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	45.3722382079615	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	-31	True	NA	NA	False	NA	NA	NA	42896655	42855247	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_42856429_42861744_42861856_42870003_42870113_42873930_42874007_42887727_42887872_42896253
H1_mix_00083365	chr8	-	1267	6	FSM	ENSG00000120925.16	ENST00000319073.5	1265	6	0	-2	0	0	multi-exon	FALSE	canonical	3	19	junction_2	37.8068776811839	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGGAAAATTCAGTATTTC	36	True	NA	-5	True	AATAAA	-15	NA	42896588	42855706	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_42856429_42861744_42861856_42870003_42870113_42873930_42874007_42887727_42887872_42896483
H1_mix_00083370	chr8	-	13459	86	FSM	ENSG00000253729.8	ENST00000314191.7	13459	86	0	0	0	0	multi-exon	TRUE	canonical	3	204	junction_64	210.005455852674	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGTGTATCTCTTTTAT	6	True	NA	-4	True	AATAAA	-15	NA	47960136	47773110	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_47774378_47776843_47776984_47777685_47777875_47778458_47778661_47778727_47778800_47779003_47779094_47782161_47782255_47782377_47782599_47783741_47783810_47785112_47785318_47788905_47789050_47789150_47789239_47794289_47794502_47798236_47798398_47799209_47799391_47800792_47800987_47803305_47803481_47807136_47807327_47817449_47817562_47819401_47819511_47820718_47820944_47821603_47821793_47823857_47823997_47826655_47826862_47828167_47828348_47830604_47830737_47831813_47831927_47834195_47834397_47836337_47836528_47837211_47837420_47839147_47839247_47840015_47840190_47849153_47849304_47849378_47849504_47852672_47852785_47854082_47854215_47855221_47855374_47857155_47857300_47858515_47858636_47858848_47858987_47859610_47859760_47860898_47860972_47862061_47862128_47862372_47862542_47863398_47863578_47864555_47864764_47877723_47877852_47879490_47879659_47881415_47881521_47881911_47882098_47885943_47886148_47887546_47887706_47888517_47888651_47889013_47889223_47890256_47890481_47893138_47893388_47897160_47897295_47898469_47898570_47900372_47900468_47902568_47902796_47904868_47904977_47912409_47912563_47913900_47914065_47915327_47915419_47918276_47918384_47927193_47927354_47927770_47927891_47929091_47929179_47929852_47930013_47930671_47930788_47933019_47933173_47933964_47934091_47935008_47935059_47935731_47935901_47936352_47936518_47939550_47939698_47943208_47943367_47943852_47943884_47943973_47944030_47953619_47953720_47953806_47953920_47954337_47954447_47955873_47955949_47957170_47957264_47957354_47957432_47959972
H1_mix_00083371	chr8	-	12784	85	FSM	ENSG00000253729.8	ENST00000338368.7	12784	85	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_6	205.928817809784	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATAGTTGATGTAACATT	801	False	NA	NA	False	AGTAAA	-5	NA	47960178	47773734	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_47774378_47776843_47776984_47777685_47777875_47778458_47778661_47778727_47778800_47779003_47779094_47782377_47782599_47783741_47783810_47785112_47785318_47788905_47789050_47789150_47789239_47794289_47794502_47798236_47798398_47799209_47799391_47800792_47800987_47803305_47803481_47807136_47807327_47817449_47817562_47819401_47819511_47820718_47820944_47821603_47821793_47823857_47823997_47826655_47826862_47828167_47828348_47830604_47830737_47831813_47831927_47834195_47834397_47836337_47836528_47837211_47837420_47839147_47839247_47840015_47840190_47849153_47849304_47849378_47849504_47852672_47852785_47854082_47854215_47855221_47855374_47857155_47857300_47858515_47858636_47858848_47858987_47859610_47859760_47860898_47860972_47862061_47862128_47862372_47862542_47863398_47863578_47864555_47864764_47877723_47877852_47879490_47879659_47881415_47881521_47881911_47882098_47885943_47886148_47887546_47887706_47888517_47888651_47889013_47889223_47890256_47890481_47893138_47893388_47897160_47897295_47898469_47898570_47900372_47900468_47902568_47902796_47904868_47904977_47912409_47912563_47913900_47914065_47915327_47915419_47918276_47918384_47927193_47927354_47927770_47927891_47929091_47929179_47929852_47930013_47930671_47930788_47933019_47933173_47933964_47934091_47935008_47935059_47935731_47935901_47936352_47936518_47939550_47939698_47943208_47943367_47943852_47943884_47943973_47944030_47953619_47953720_47953806_47953920_47954337_47954447_47955873_47955949_47957170_47957264_47957354_47957432_47959972
H1_mix_00083373	chr8	-	699	3	FSM	ENSG00000253729.8	ENST00000541488.1	719	3	0	20	0	-20	multi-exon	FALSE	canonical	3	262	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTCAGAAAATTCAACAGT	-13	True	NA	NA	False	AATAAA	-18	NA	47929169	47926852	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_47927354_47927770_47927891_47929091
H1_mix_00083375	chr8	-	4143	6	FSM	ENSG00000168300.14	ENST00000522514.6	4044	6	-96	-3	-19	0	multi-exon	FALSE	canonical	3	128	junction_4	16.1046577113579	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCCCATGGCCTGAC	-24	True	NA	-18	True	AATAAA	-21	NA	51899132	51817579	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_51820719_51831443_51831568_51833517_51833690_51845660_51845764_51860844_51861247_51898929
H1_mix_00083376	chr8	-	1204	6	FSM	ENSG00000168300.14	ENST00000519559.1	1204	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	72.2921849164901	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAAATGTTGTTTTAGCT	215	False	NA	7	True	AATAAA	-39	NA	51898970	51820146	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_51820719_51831443_51831568_51833517_51833690_51839446_51839639_51845660_51845764_51898929
H1_mix_00083377	chr8	-	814	4	FSM	ENSG00000168300.14	ENST00000519554.5	814	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	69.0523151112417	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATAATTTTTCATCTTGA	9131	False	NA	NA	False	ATTAAA	-18	NA	51845745	51826928	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_51827362_51831443_51831568_51833517_51833690_51845660
H1_mix_00083379	chr8	-	2176	1	NIC	ENSG00000168300.14	novel	1712	3	NA	NA	-5375	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCCTTTTATTAATGCA	9787	False	NA	NA	False	AATAAA	-29	NA	51851120	51848944	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_51848900_51851100
H1_mix_00083380	chr8	-	1141	5	FSM	ENSG00000196711.9	ENST00000358543.9	1140	5	0	-1	0	1	multi-exon	FALSE	canonical	3	14	junction_4	3.34477204006491	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGCTTTTGAAGTGTGA	0	True	NA	NA	False	ATTAAA	-17	NA	52565430	52534035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_52534601_52538430_52538508_52539830_52539912_52542391_52542446_52565066
H1_mix_00083381	chr8	-	6648	24	FSM	ENSG00000023287.13	ENST00000025008.10	6636	24	0	-12	0	12	multi-exon	FALSE	canonical	3	181	junction_2	54.8847908317986	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTTTCCATGACATCTT	8	True	NA	-1	True	AATAAA	-29	NA	52714435	52622445	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_52623860_52624716_52624788_52628031_52628169_52630469_52630529_52634920_52634969_52636014_52636070_52642350_52642592_52642703_52642813_52645701_52645868_52656007_52657909_52657997_52658125_52658872_52658977_52660595_52660658_52660925_52661008_52661094_52661282_52661534_52661720_52668020_52668192_52673844_52674275_52676368_52676572_52683548_52683720_52683886_52684014_52685398_52685521_52686852_52686968_52714074
H1_mix_00083382	chr8	-	6627	24	FSM	ENSG00000023287.13	ENST00000435644.6	6614	24	0	-13	0	12	multi-exon	FALSE	canonical	3	241	junction_12	47.5617994161817	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTTTCCATGACATCTT	20	True	NA	-1	True	AATAAA	-29	NA	52714423	52622445	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_52623860_52624716_52624788_52628040_52628169_52630469_52630529_52634920_52634969_52636014_52636070_52642350_52642592_52642703_52642813_52645701_52645868_52656007_52657909_52657997_52658125_52658872_52658977_52660595_52660658_52660925_52661008_52661094_52661282_52661534_52661720_52668020_52668192_52673844_52674275_52676368_52676572_52683548_52683720_52683886_52684014_52685398_52685521_52686852_52686968_52714074
H1_mix_00083386	chr8	-	4954	4	FSM	ENSG00000082556.14	ENST00000265572.8	4954	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0.471404520791032	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGTCAATTATTGTGGT	-2	True	NA	NA	False	AATAAA	-27	NA	53251637	53225723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_53229830_53234758_53235112_53250780_53251086_53251447
H1_mix_00083387	chr8	-	1073	3	FSM	ENSG00000082556.14	ENST00000524278.5	1195	3	122	0	122	0	multi-exon	FALSE	canonical	0	0	junction_2	3.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGATAGAATTTAAAATAAAC	NA	False	NA	NA	False	NA	NA	NA	53238610	53229202	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_53229830_53234758_53235112_53238517
H1_mix_00083389	chr8	-	2379	13	FSM	ENSG00000047249.18	ENST00000355221.7	2365	13	0	-14	0	0	multi-exon	FALSE	canonical	3	48	junction_7	53.3689334309348	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGTCTCTATGCAGCTC	NA	False	NA	1	True	AATAAA	-27	NA	53843558	53715542	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_53716025_53743576_53743691_53756554_53756657_53769617_53769744_53771988_53772168_53795646_53795840_53801798_53801897_53814661_53814767_53817416_53817531_53829443_53829534_53832983_53833087_53841577_53841726_53843033
H1_mix_00083390	chr8	-	1861	13	NIC	ENSG00000047249.18	novel	1892	14	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_12	72.922714034944	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCCTCTCTCTTTACTT	268	False	NA	-1	True	AATAAA	-30	NA	53843004	53715669	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_53716025_53743576_53743691_53756554_53756657_53769617_53769744_53771988_53772168_53795646_53795840_53801798_53801897_53814661_53814767_53817416_53817531_53829443_53829534_53832983_53833087_53841577_53841726_53842870
H1_mix_00083391	chr8	-	1860	14	FSM	ENSG00000047249.18	ENST00000396774.6	1892	14	32	0	7	0	multi-exon	FALSE	canonical	3	33	junction_13	56.2665886124514	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCTGTATTTATTGTTC	262	False	NA	-62	True	AAGAAA	-27	NA	53843010	53715730	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_53716025_53743576_53743691_53756554_53756657_53769617_53769744_53771988_53772168_53795646_53795840_53801798_53801897_53811163_53811218_53814661_53814767_53817416_53817531_53829443_53829534_53832983_53833087_53841577_53841726_53842870
H1_mix_00083394	chr8	-	1891	1	FSM	ENSG00000244159.1	ENST00000498403.1	237	1	-545	-1109	-545	1109	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTCTGTCTAAGAACATG	NA	False	NA	NA	False	NA	NA	NA	53887789	53885898	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_53885900_53887800
H1_mix_00083395	chr8	-	2785	10	FSM	ENSG00000187735.15	ENST00000521604.7	2777	10	0	-8	0	4	multi-exon	FALSE	canonical	2	548	junction_4	318.306553071713	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTCATTTTATTTAGACA	-1	True	NA	4	True	AATAAA	-31	NA	54022448	53966547	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_53968113_53970391_53970464_53979024_53979172_53984362_53984518_53986968_53987026_53988113_53988260_53993667_53993756_53999944_54000051_54010429_54010493_54022062
H1_mix_00083396	chr8	-	2722	9	FSM	ENSG00000187735.15	ENST00000396401.7	2718	9	0	-4	0	4	multi-exon	FALSE	canonical	2	105	junction_8	500.783869922944	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTCATTTTATTTAGACA	-1	True	NA	4	True	AATAAA	-31	NA	54022448	53966547	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_53968113_53970391_53970464_53979024_53979172_53984362_53984518_53986968_53987026_53988113_53988260_53993667_53993756_53999944_54000051_54022062
H1_mix_00083398	chr8	-	2515	9	FSM	ENSG00000120992.18	ENST00000316963.8	2515	9	0	0	0	0	multi-exon	FALSE	canonical	3	1369	junction_4	81.1664955508121	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAGTATTTTAATATTT	1	True	NA	-1	True	AATAAA	-24	NA	54101947	54046366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_54048119_54051011_54051189_54052654_54052757_54055059_54055134_54062253_54062325_54063327_54063376_54065747_54065814_54100907_54100940_54101754
H1_mix_00083399	chr8	-	2483	8	FSM	ENSG00000120992.18	ENST00000618914.4	2482	8	0	-1	0	0	multi-exon	FALSE	canonical	3	92	junction_2	475.314933190917	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAGTATTTTAATATTT	-69	True	NA	-1	True	AATAAA	-24	NA	54102017	54046366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_54048119_54051011_54051189_54055059_54055134_54062253_54062325_54063327_54063376_54065747_54065814_54100907_54100940_54101754
H1_mix_00083400	chr8	-	2527	9	FSM	ENSG00000120992.18	ENST00000618741.1	2526	9	0	-1	0	0	multi-exon	FALSE	canonical	3	110	junction_8	458.404502050318	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAGTATTTTAATATTT	394	False	NA	-1	True	AATAAA	-24	NA	54101554	54046366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_54048119_54051011_54051189_54052654_54052757_54055059_54055134_54062253_54062325_54063327_54063376_54065747_54065814_54100907_54100940_54101349
H1_mix_00083405	chr8	-	2587	8	FSM	ENSG00000167904.16	ENST00000434581.7	2573	8	0	-14	0	0	multi-exon	FALSE	canonical	3	96	junction_1	16.2556112760851	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTCTTGAGAAATTACA	34	False	55773397	0	True	AATAAA	-15	NA	55773378	55738743	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_55740219_55743480_55743621_55745060_55745122_55750963_55751158_55756243_55756412_55762634_55763029_55763935_55763981_55773268
H1_mix_00083406	chr8	-	2415	6	FSM	ENSG00000167904.16	ENST00000334667.6	2401	6	0	-14	0	0	multi-exon	FALSE	canonical	2	3	junction_1	49.3096339471305	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTCTTGAGAAATTACA	5	True	NA	0	True	AATAAA	-15	NA	55773407	55738743	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_55740219_55750963_55751158_55756243_55756412_55762634_55763029_55763935_55763981_55773268
H1_mix_00083408	chr8	-	2456	3	FSM	ENSG00000167904.16	ENST00000521229.5	2400	3	-56	0	-16	0	multi-exon	FALSE	canonical	3	105	junction_2	21.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTCCATTTGAGTAGC	NA	False	NA	NA	False	ATTAAA	-18	NA	55773423	55760772	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_55763029_55763935_55763981_55773268
H1_mix_00083409	chr8	-	826	3	FSM	ENSG00000167904.16	ENST00000522576.5	826	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	65	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGTTGAAATAAGAAAATTT	34	False	55773397	-84	True	ATTAAA	-29	NA	55773378	55762399	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_55763029_55763935_55763981_55773226
H1_mix_00083412	chr8	-	519	4	FSM	ENSG00000008988.11	ENST00000009589.8	519	4	0	0	0	0	multi-exon	FALSE	canonical	3	8543	junction_3	171.822259584982	8323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTTGGTTTTTATTCA	-1	True	NA	-14	True	AATAAA	-19	NA	56074506	56073053	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_56073273_56073694_56073769_56074059_56074160_56074380
H1_mix_00083413	chr8	-	650	4	FSM	ENSG00000008988.11	ENST00000521262.5	650	4	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_3	4094.84719562959	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTTGGTTTTTATTCA	NA	False	NA	-14	True	AATAAA	-19	NA	56074510	56073053	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_56073273_56073694_56073769_56074059_56074160_56074253
H1_mix_00083414	chr8	-	899	3	FSM	ENSG00000008988.11	ENST00000523936.5	899	3	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_2	4270.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGATGACCAGTTGTTAAC	149	False	NA	-33	True	NA	NA	NA	56074356	56073072	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_56073769_56074059_56074160_56074253
H1_mix_00083415	chr8	-	737	3	FSM	ENSG00000008988.11	ENST00000521289.5	737	3	0	0	0	0	multi-exon	FALSE	canonical	3	8543	junction_2	205.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGTTGAGGTGGAAGTCA	-1	True	NA	-87	True	NA	NA	NA	56074506	56073126	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_56073273_56073694_56074160_56074380
H1_mix_00083417	chr8	-	7303	5	NNC	ENSG00000181690.8	novel	7311	5	NA	NA	-22	57382	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.796655456448	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCATCACCACTCCCTGA	-2	True	NA	NA	False	NA	NA	NA	56211346	56103526	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_56103555_56160912_56167504_56168027_56168387_56171090_56171190_56211120
H1_mix_00083419	chr8	-	1684	3	FSM	ENSG00000181690.8	ENST00000423799.6	1684	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	6.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAGCTTTTAAACTGAGC	-18	True	NA	NA	False	TATAAA	-6	NA	56211300	56166098	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_56167504_56171090_56171190_56211120
H1_mix_00083421	chr8	-	1144	2	FSM	ENSG00000181195.11	ENST00000314922.3	1199	2	55	0	-31	0	multi-exon	FALSE	canonical	2	5	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCTTGTAAGTCTCTTTT	2047	False	NA	NA	False	AATAAA	-22	NA	56445975	56440953	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_56441938_56445815
H1_mix_00083422	chr8	-	7227	5	FSM	ENSG00000104331.9	ENST00000262644.9	7224	5	0	-3	0	3	multi-exon	FALSE	canonical	3	129	junction_1	20.4022057631032	162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGCTGCATCTGCTTTT	-19	True	NA	-2	True	AATAAA	-22	NA	56993867	56957927	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_56964065_56966190_56966353_56978049_56978146_56980034_56980198_56993198
H1_mix_00083423	chr8	-	3581	31	FSM	ENSG00000035681.9	ENST00000038176.8	3574	31	0	-7	0	7	multi-exon	TRUE	canonical	3	94	junction_30	19.9805738989983	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCACTTTATTTAAGTA	-44	True	NA	NA	False	ATTAAA	-24	NA	58659853	58583500	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_58584201_58585651_58585762_58585897_58586001_58586457_58586609_58587617_58587702_58589451_58589576_58590006_58590075_58590866_58590935_58594231_58594291_58595559_58595660_58597386_58597551_58597859_58597903_58599231_58599364_58599749_58599871_58599969_58600022_58601284_58601349_58601444_58601536_58602057_58602138_58603209_58603387_58605926_58606036_58607768_58607841_58609603_58609734_58623219_58623273_58623376_58623425_58623708_58623781_58631495_58631547_58635188_58635226_58635304_58635373_58635467_58635547_58642983_58643074_58659572
H1_mix_00083424	chr8	-	583	5	FSM	ENSG00000035681.9	ENST00000519227.1	583	5	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_4	15.5623744974859	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACCACATCCTCGAAGGA	-2	True	NA	NA	False	AAAACA	-10	NA	58600178	58597472	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_58597551_58597859_58597903_58599231_58599364_58599749_58599871_58599969
H1_mix_00083425	chr8	-	4075	9	FSM	ENSG00000198846.6	ENST00000361421.2	4076	9	0	1	0	-1	multi-exon	FALSE	canonical	3	62	junction_2	12.3888811036348	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTATTTGGTGATCCATC	-10	True	NA	0	True	AATAAA	-43	NA	59119147	58805412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_58807784_58808117_58808270_58815337_58815725_58826821_58826903_58838080_58838312_58851523_58851806_58939301_58939545_58959942_58960009_59118885
H1_mix_00083426	chr8	-	5630	9	FSM	ENSG00000178538.10	ENST00000317995.5	5735	9	0	105	0	-105	multi-exon	TRUE	canonical	3	13	junction_1	6.14410286372225	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTCTGTATTTATTCT	-3	True	NA	-105	True	NA	NA	NA	60281400	60185516	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_60189986_60208749_60208920_60222648_60222762_60224536_60224586_60226872_60226936_60232283_60232380_60265924_60266050_60279688_60279881_60281047
H1_mix_00083427	chr8	-	2092	8	FSM	ENSG00000178538.10	ENST00000524872.5	1825	8	0	-267	0	267	multi-exon	FALSE	canonical	3	18	junction_4	5.32993088747932	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGGGTGACAGATTGAG	12	False	NA	NA	False	NA	NA	NA	60281385	60207803	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_60208920_60222648_60222762_60224536_60224586_60226872_60226936_60232283_60232380_60265924_60266050_60279688_60279881_60281047
H1_mix_00083429	chr8	-	5287	25	NIC	ENSG00000198363.18	novel	5301	25	NA	NA	6	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_22	133.717305193955	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCATTTCTAGTCTTCT	8477	False	61714610	-6	True	AATAAA	-19	NA	61714581	61500555	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_61503510_61517527_61517662_61518031_61518124_61525976_61526113_61548070_61548209_61553030_61553121_61555923_61556023_61562743_61562881_61567167_61567319_61576771_61576859_61583943_61584030_61618977_61619020_61633682_61633728_61637946_61638004_61638321_61638361_61642887_61642921_61643385_61643434_61643944_61644002_61644599_61644633_61646749_61646879_61651049_61651125_61653567_61653661_61680967_61681037_61684038_61684189_61714268
H1_mix_00083430	chr8	-	1277	10	FSM	ENSG00000198363.18	ENST00000522919.5	1277	10	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	138.999422682876	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATACAGTGTGATGCCTT	6804	False	NA	-10	True	AATAAA	-16	NA	61646807	61606460	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_61607323_61618977_61619020_61633682_61633728_61637946_61638004_61638321_61638364_61642887_61642921_61643385_61643434_61643944_61644002_61644599_61644633_61646749
H1_mix_00083431	chr8	-	3730	14	FSM	ENSG00000198363.18	ENST00000356457.9	3730	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	115.168104558911	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAATATACTAATTTCTT	8462	False	61714610	NA	False	AATAAA	-20	NA	61714596	61623709	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_61626281_61633682_61633728_61637946_61638004_61638321_61638364_61642887_61642921_61643385_61643434_61643944_61644002_61644599_61644633_61646749_61646879_61651049_61651125_61653567_61653661_61680967_61681037_61684038_61684189_61714268
H1_mix_00083432	chr8	-	2673	13	NIC	ENSG00000198363.18	novel	2874	15	NA	NA	27	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	157.326690361172	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGTCATTATTTTTGA	51	True	NA	-12	True	AATAAA	-17	NA	61714498	61624536	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_61626281_61633682_61633728_61637946_61638004_61638321_61638361_61642887_61642921_61643385_61643434_61643944_61644002_61644599_61644633_61651049_61651125_61653567_61653661_61680967_61681037_61684038_61684189_61714268
H1_mix_00083433	chr8	-	2900	14	NIC	ENSG00000198363.18	novel	2874	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	129.910392421744	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGTCATTATTTTTGA	8462	False	61714610	-12	True	AATAAA	-17	NA	61714596	61624536	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_61626281_61633682_61633728_61637946_61638004_61638321_61638361_61642887_61642921_61643385_61643434_61643944_61644002_61644599_61644633_61646749_61646879_61651049_61651125_61653567_61653661_61680967_61681037_61684038_61684189_61714268
H1_mix_00083435	chr8	-	6337	4	FSM	ENSG00000198363.18	ENST00000517856.5	6337	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	198.005050440639	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATGACTGAATTGAGCTT	8471	False	61714610	-9	True	AATAAA	-20	NA	61714587	61656127	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_61661927_61680967_61681037_61684038_61684189_61714268
H1_mix_00083438	chr8	-	1835	10	FSM	ENSG00000137563.13	ENST00000679326.1	1835	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	198.60613047368	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTTCATTCTGTATGTG	32	False	NA	-97	True	NA	NA	NA	63039407	63015210	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_63015454_63017065_63017184_63017492_63017631_63023906_63023998_63024079_63024187_63026157_63026297_63027180_63027266_63030166_63030218_63035655_63035771_63038659
H1_mix_00083440	chr8	-	616	1	FSM	ENSG00000272010.1	ENST00000606963.1	623	1	5	2	5	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCGGTGCCTGTGTGCTC	NA	False	NA	NA	False	TATAAA	-6	NA	65592467	65591851	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_65591900_65592500
H1_mix_00083441	chr8	-	3004	7	FSM	ENSG00000104442.10	ENST00000276569.8	3000	7	0	-4	0	4	multi-exon	FALSE	canonical	3	154	junction_5	9.81070843517429	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGTATAAGCATTATT	-12	True	NA	-14	True	AATAAA	-36	NA	65634177	65602453	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_65604586_65605262_65605338_65605421_65605539_65613243_65613434_65622262_65622355_65627215_65627434_65633997
H1_mix_00083442	chr8	-	6961	13	FSM	ENSG00000205268.11	ENST00000401827.8	6961	13	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_2	34.3725504177712	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAATTAATGTGTTCCC	-1	True	NA	NA	False	AATAAA	-20	NA	65842064	65714333	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_65719496_65723540_65723622_65724254_65724352_65724776_65724922_65726874_65726967_65727169_65727302_65734793_65734895_65739501_65739598_65745406_65745471_65747651_65747804_65779719_65779804_65782782_65782844_65841370
H1_mix_00083443	chr8	-	3634	14	NIC	ENSG00000205268.11	novel	6961	13	NA	NA	80	694	intron_retention	FALSE	canonical	3	64	junction_11	145.291300944611	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTATCTTTGACATTT	-3	True	NA	-25	True	AATAAA	-15	NA	65841984	65717684	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_65719496_65723540_65723622_65724254_65724352_65724776_65724922_65726874_65726967_65727169_65727302_65734793_65734895_65739501_65739598_65745406_65745471_65747651_65747804_65779719_65779804_65780843_65780948_65782782_65782844_65841370
H1_mix_00083444	chr8	-	2986	12	FSM	ENSG00000205268.11	ENST00000396642.7	2986	12	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_1	35.8806561757628	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGACAAAAGAGAATTGAAT	1005	False	NA	NA	False	AATGAA	-40	NA	65841508	65721797	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_65723622_65724254_65724352_65724776_65724922_65726874_65726967_65727169_65727302_65734793_65734895_65739501_65739598_65745406_65745471_65747651_65747804_65779719_65779804_65782782_65782844_65841370
H1_mix_00083446	chr8	-	2148	15	FSM	ENSG00000185697.17	ENST00000524176.2	2148	15	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_9	5.14930151791959	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTTATTAAAATTGATGAA	1339	False	NA	NA	False	NA	NA	NA	66612907	66564696	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_66564826_66566683_66566789_66566875_66566993_66572481_66572597_66573363_66573507_66576006_66576376_66580132_66580367_66592439_66592545_66593119_66593195_66595582_66595758_66597329_66597551_66599049_66599143_66601697_66601770_66602417_66602524_66612818
H1_mix_00083449	chr8	-	648	3	FSM	ENSG00000245910.9	ENST00000686474.1	1806	3	35	1123	0	134	multi-exon	FALSE	canonical	3	45	junction_1	324	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTCACCTTTTTTATTCA	-3	True	NA	NA	False	GATAAA	-1	NA	66925541	66921683	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_66922115_66922613_66922726_66925436
H1_mix_00083450	chr8	-	638	4	FSM	ENSG00000245910.9	ENST00000520944.6	639	4	1	0	1	0	multi-exon	FALSE	canonical	3	693	junction_3	105.738671576045	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGGGGAGACATTGCTT	NA	False	NA	94	True	NA	NA	NA	66925596	66921817	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_66922115_66922323_66922393_66922613_66922726_66925436
H1_mix_00083451	chr8	-	361	3	FSM	ENSG00000245910.9	ENST00000521399.6	366	3	4	1	0	-1	multi-exon	FALSE	canonical	3	197	junction_2	312	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCTCCATTCTCATAGTC	-3	True	NA	-16	True	AATAAA	-26	NA	66925541	66921927	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_66922115_66922323_66922393_66925436
H1_mix_00083452	chr8	-	560	2	FSM	ENSG00000245910.9	ENST00000521127.1	560	2	0	0	0	0	multi-exon	FALSE	canonical	3	693	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTAAGGGTGGGGGCAG	-3	True	NA	NA	False	NA	NA	NA	66925541	66922270	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_66922726_66925436
H1_mix_00083453	chr8	-	718	5	FSM	ENSG00000121022.14	ENST00000523086.5	717	5	0	-1	0	1	multi-exon	FALSE	canonical	3	8	junction_3	322.857844104801	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTTTGATTTTTTTGTG	5713	False	NA	NA	False	AATAAA	-18	NA	67056560	67043077	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_67043318_67045811_67045961_67047684_67047860_67051229_67051342_67056518
H1_mix_00083456	chr8	-	7401	40	NIC	ENSG00000066777.9	novel	7320	39	NA	NA	-254	0	combination_of_known_junctions	TRUE	canonical	3	44	junction_39	49.0820804835032	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTATAACCCACCCCCAT	NA	False	NA	-14	True	AATAAA	-33	NA	67344035	67197657	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_67199099_67200395_67200514_67201466_67201606_67203082_67203252_67204679_67204820_67211482_67211616_67216589_67216663_67217781_67217921_67218002_67218139_67219430_67219561_67224902_67225034_67226022_67226184_67227136_67227310_67227446_67227599_67227962_67228133_67228223_67228265_67232854_67232946_67238342_67238494_67238734_67238894_67240161_67240291_67251298_67251451_67253450_67253623_67257731_67257817_67258084_67258291_67259814_67259927_67266005_67266208_67266875_67266985_67267090_67267231_67267342_67267443_67271701_67271937_67275975_67276110_67277281_67277458_67287954_67288066_67291846_67292124_67296430_67296611_67299208_67299356_67301223_67301381_67302435_67302467_67343163_67343337_67343509
H1_mix_00083459	chr8	-	2905	3	FSM	ENSG00000248801.7	ENST00000660308.1	2842	3	-50	-13	-50	13	multi-exon	FALSE	canonical	3	10	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATGTGTGTCTTTATTT	NA	False	NA	-2	True	AATGAA	-22	NA	68331561	68302232	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_68304802_68306517_68306599_68331306
H1_mix_00083461	chr8	-	2269	8	FSM	ENSG00000147596.4	ENST00000276594.3	2269	8	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_6	33.5297613764128	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATTCCAACACTTTGGGA	-3	True	NA	NA	False	NA	NA	NA	70071252	70051650	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_70052305_70055299_70055402_70058639_70058843_70066234_70066506_70068229_70068388_70068478_70068533_70069160_70069885_70071149
H1_mix_00083466	chr8	-	566	3	FSM	ENSG00000140396.13	ENST00000521239.1	563	3	0	-3	0	3	multi-exon	FALSE	canonical	3	67	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCTCCTTTTCTCTGAGT	NA	False	NA	NA	False	NA	NA	NA	70128747	70126605	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_70127048_70128432_70128511_70128701
H1_mix_00083468	chr8	-	3056	11	FSM	ENSG00000067167.8	ENST00000262213.7	3056	11	0	0	0	0	multi-exon	FALSE	canonical	3	850	junction_1	67.9694784443724	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAAGGTGTCTCTTTATT	-1	True	NA	NA	False	AATAAA	-26	NA	70608416	70573217	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_70575006_70583163_70583325_70583649_70583794_70586894_70587000_70587105_70587177_70594505_70594591_70596262_70596322_70597894_70598012_70598133_70598256_70600018_70600083_70608076
H1_mix_00083470	chr8	-	4037	18	FSM	ENSG00000104313.20	ENST00000340726.8	4163	18	53	73	53	5	multi-exon	FALSE	canonical	1	2	junction_15	2.80632010397096	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGTTGTGTACAGAATTTT	1491	False	NA	-72	True	TATAAA	-15	NA	71362016	71197505	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_71199421_71211155_71211257_71215386_71215509_71215613_71215729_71216691_71216853_71216964_71217024_71244602_71244693_71269739_71269824_71271757_71271898_71299046_71299234_71299637_71299721_71317551_71317690_71321733_71321880_71322198_71322269_71334096_71334175_71354781_71354910_71356461_71356512_71361646
H1_mix_00083474	chr8	-	3697	5	FSM	ENSG00000164764.11	ENST00000297354.7	3698	5	1	0	1	0	multi-exon	FALSE	canonical	2	5	junction_4	2.1650635094611	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATTCTAGTGAAGGTTC	-14	True	NA	NA	False	AATAAA	-20	NA	73093171	73064542	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_73067459_73069804_73069982_73071779_73071871_73081018_73081214_73092853
H1_mix_00083475	chr8	-	1512	7	FSM	ENSG00000147604.14	ENST00000352983.7	1233	7	0	-279	0	279	multi-exon	FALSE	canonical	3	19042	junction_1	4694.5917968327	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTCAAAGTTCTGACACAC	-6	True	NA	NA	False	AGTAAA	-23	NA	73293633	73289962	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_73290706_73291042_73291253_73291551_73291662_73291772_73291911_73292238_73292406_73292688_73292798_73293598
H1_mix_00083476	chr8	-	1630	6	ISM	ENSG00000147604.14	ENST00000352983.7	1233	7	0	404	0	-362	intron_retention	FALSE	canonical	3	19042	junction_1	4981.07241465129	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATATATTGTTGTATTT	-6	True	NA	-30	True	AATAAA	-19	NA	73293633	73290645	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_-_73290706_73291042_73291253_73291551_73291662_73291772_73291911_73292238_73292406_73292688
H1_mix_00083477	chr8	-	1546	7	NIC	ENSG00000147604.14	novel	1233	7	NA	NA	0	-362	combination_of_known_junctions	FALSE	canonical	3	20	junction_6	11443.1555440602	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATATATTGTTGTATTT	-6	True	NA	-30	True	AATAAA	-19	NA	73293633	73290645	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_73290706_73291042_73291253_73291551_73291662_73291772_73291911_73292238_73292406_73292688_73292798_73292881
H1_mix_00083479	chr8	-	1644	6	FSM	ENSG00000147604.14	ENST00000396465.5	1308	6	0	-336	0	334	multi-exon	FALSE	canonical	3	35	junction_5	12337.6368985313	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTACCATGATTATTTT	31	False	NA	-90	True	NA	NA	NA	73294438	73290705	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_73291253_73291551_73291662_73291772_73291911_73292238_73292406_73292688_73292798_73293865
H1_mix_00083483	chr8	-	2970	15	FSM	ENSG00000040341.18	ENST00000524300.6	2970	15	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_12	161.581027882077	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTGTTGTTGTTCTTTTG	0	True	NA	0	True	AGTAAA	-24	NA	73746840	73420368	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_73421466_73422613_73422703_73552011_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73709031_73709163_73738283_73738350_73739755_73739869_73746782
H1_mix_00083484	chr8	-	2660	13	NIC	ENSG00000040341.18	novel	4061	12	NA	NA	2	534	combination_of_known_junctions	FALSE	canonical	3	86	junction_1	123.179718523609	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTATTGTTTCTTAATAAA	707	False	NA	-3	True	AATAAA	-17	NA	73746877	73526834	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_73527805_73552011_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73738283_73738350_73739755_73739869_73746782
H1_mix_00083485	chr8	-	7519	12	FSM	ENSG00000040341.18	ENST00000355780.9	4061	12	0	-3458	0	3458	multi-exon	FALSE	canonical	3	467	junction_9	30.2559330975481	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	0	True	NA	NA	False	NA	NA	NA	73746840	73546145	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73738283_73738350_73739755_73739869_73746782
H1_mix_00083486	chr8	-	1695	10	FSM	ENSG00000040341.18	ENST00000517542.5	1695	10	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_9	156.517738512719	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGATCTATCTAGTAAT	705	False	NA	NA	False	AAAAAG	-29	NA	73746879	73551829	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73746782
H1_mix_00083488	chr8	-	2173	6	FSM	ENSG00000040341.18	ENST00000524104.5	2173	6	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	174.966968311164	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCTAGTAAGTAATGCAT	0	True	NA	NA	False	ATTAAA	-29	NA	73746840	73652256	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_73653897_73673106_73673243_73688653_73688814_73738283_73738350_73739755_73739869_73746782
H1_mix_00083489	chr8	-	1041	7	FSM	ENSG00000040341.18	ENST00000522962.5	1041	7	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	205.695905539113	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGAATTACAGTTAACCA	766	False	NA	NA	False	AGTAAA	-8	NA	73746818	73653497	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_73653897_73673106_73673243_73688653_73688814_73709031_73709163_73738283_73738350_73739755_73739869_73746782
H1_mix_00083490	chr8	-	472	5	FSM	ENSG00000040341.18	ENST00000520945.5	472	5	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	231.536174279528	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACAACTTTCGGGGCAT	0	True	NA	NA	False	NA	NA	NA	73746840	73673138	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_73673243_73709031_73709163_73738283_73738350_73739755_73739869_73746782
H1_mix_00083493	chr8	-	8444	7	FSM	ENSG00000104343.21	ENST00000650817.1	8459	7	16	-1	15	0	multi-exon	FALSE	canonical	3	15	junction_6	130.967871378187	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTTTGGCTTTTTTTAT	NA	False	NA	0	True	AATAAA	-18	NA	73878894	73786218	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_73794116_73805650_73805727_73810473_73810630_73825146_73825250_73830380_73830473_73870268_73870302_73878807
H1_mix_00083494	chr8	-	3903	5	FSM	ENSG00000104343.21	ENST00000422906.6	3903	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	110.141670134423	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTATGGTTACTGCTGC	-25	True	NA	-22	True	AATAAA	-24	NA	73878875	73790604	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_73794116_73805650_73805727_73810473_73810630_73830380_73830473_73878807
H1_mix_00083495	chr8	-	1976	5	FSM	ENSG00000154582.18	ENST00000622804.2	1992	5	44	-28	0	-19	multi-exon	FALSE	canonical	3	9	junction_4	1882.54978353827	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	385	False	NA	NA	False	NA	NA	NA	73971908	73945137	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73970578_73970635_73971869
H1_mix_00083496	chr8	-	2020	4	FSM	ENSG00000154582.18	ENST00000520242.6	2015	4	0	-5	0	5	multi-exon	FALSE	canonical	3	2603	junction_3	572.278681141355	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGGCCTAATATGGACCA	-9	True	NA	NA	False	NA	NA	NA	73972191	73945113	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73972076
H1_mix_00083497	chr8	-	1948	4	FSM	ENSG00000154582.18	ENST00000518127.5	1943	4	0	-5	0	5	multi-exon	FALSE	canonical	3	637	junction_3	1487.21372595423	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGGCCTAATATGGACCA	6	True	NA	NA	False	NA	NA	NA	73972287	73945113	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73972244
H1_mix_00083498	chr8	-	1451	3	FSM	ENSG00000154582.18	ENST00000520210.1	1451	3	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	1926.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCATTCAGCTTTTCTATT	12	True	NA	7	True	AATAAA	-37	NA	73972170	73945607	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_73946821_73955910_73956055_73972076
H1_mix_00083499	chr8	-	683	4	FSM	ENSG00000154582.18	ENST00000284811.12	683	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_3	1743.06250286353	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTAGGTGGTTTTGCCTT	187	False	NA	-10	True	AATAAA	-13	NA	73972106	73946400	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73972041
H1_mix_00083500	chr8	-	816	5	FSM	ENSG00000154582.18	ENST00000522337.5	816	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	1873.80401856758	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAAATTTGTTTGCTAC	-3	True	NA	-82	True	NA	NA	NA	73972232	73946472	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73969559_73969674_73972076
H1_mix_00083501	chr8	-	634	5	FSM	ENSG00000154582.18	ENST00000519082.5	634	5	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_4	1786.51201717201	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGAATTCCCAATTGCAC	1	True	NA	-121	True	NA	NA	NA	73972252	73946699	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73964486_73964626_73972076
H1_mix_00083502	chr8	-	4762	5	NIC	ENSG00000104369.5	novel	4590	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	90	junction_1	6.18465843842649	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGAGGTGTGTTTTCTTT	1	True	NA	NA	False	AATAAA	-22	NA	74321540	74234699	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_74237304_74244528_74245176_74259384_74259504_74314860_74315621_74320908
H1_mix_00083503	chr8	-	4310	6	NNC	ENSG00000104369.5	novel	4590	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_1	24.0449578914167	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGAGGTGTGTTTTCTTT	1	True	NA	NA	False	AATAAA	-22	NA	74321540	74234699	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_74236756_74237207_74237304_74244528_74245176_74259384_74259504_74314860_74315621_74320908
H1_mix_00083504	chr8	-	4609	6	FSM	ENSG00000104369.5	ENST00000342232.5	4590	6	-19	0	-19	0	multi-exon	FALSE	canonical	3	20	junction_1	30.7024428995479	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGAGGTGTGTTTTCTTT	9	True	NA	NA	False	AATAAA	-22	NA	74321559	74234699	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_74237036_74237207_74237304_74244528_74245176_74259384_74259504_74314860_74315621_74320908
H1_mix_00083509	chr8	-	4182	4	FSM	ENSG00000164751.15	ENST00000357039.9	4169	4	0	-13	0	13	multi-exon	FALSE	canonical	3	178	junction_3	21.3124898175277	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGATAGAGTAACTTCTAAG	25	True	NA	NA	False	AATAAA	-36	NA	77000078	76980244	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_76984196_76986186_76986297_76988306_76988339_76999989
H1_mix_00083510	chr8	-	5540	3	FSM	ENSG00000164751.15	ENST00000522527.5	1627	3	37	-3950	0	1251	multi-exon	FALSE	canonical	3	51	junction_2	88.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCATATCTAAATTACTCA	-9	True	NA	NA	False	TTTAAA	-20	NA	77000230	76979006	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_76984196_76986186_76986297_76999989
H1_mix_00083512	chr8	-	2279	5	FSM	ENSG00000164683.18	ENST00000354724.8	2197	5	-82	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	2.9474565306379	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGGTGTATGTCTTAC	5	True	NA	NA	False	AATAAA	-18	NA	79767849	79764009	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_79765772_79766650_79766733_79767008_79767093_79767218_79767295_79767574
H1_mix_00083514	chr8	-	812	3	NIC	ENSG00000147586.10	novel	838	3	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	132	junction_2	141.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCATGGTACTAGTTTAA	12	True	NA	0	True	AATAAA	-21	NA	80030251	79918716	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_79919149_80002998_80003181_80030053
H1_mix_00083516	chr8	-	388	1	FSM	ENSG00000272518.1	ENST00000606512.1	917	1	83	446	83	-446	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGTTCATGTGTTAATT	NA	False	NA	NA	False	ACTAAA	-24	NA	79957298	79956910	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_79956900_79957300
H1_mix_00083517	chr8	-	4084	6	FSM	ENSG00000076554.16	ENST00000379096.9	4041	6	2	-45	0	45	multi-exon	FALSE	canonical	0	0	junction_1	340.64961470696	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCTTGGTTTCTAGAAT	-19	True	NA	45	True	TTTAAA	-3	NA	80171556	80034699	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_80038236_80042619_80042669_80051526_80051629_80053281_80053431_80064477_80064594_80171424
H1_mix_00083518	chr8	-	584	7	FSM	ENSG00000076554.16	ENST00000518517.5	584	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	421.06557947928	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCGGCTGCAAATGCTAG	2	True	NA	NA	False	NA	NA	NA	80171471	80038184	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_80038236_80042619_80042669_80051526_80051629_80053281_80053431_80064477_80064594_80119814_80119885_80171424
H1_mix_00083519	chr8	-	458	3	FSM	ENSG00000076554.16	ENST00000520795.5	445	3	0	-13	0	13	multi-exon	FALSE	canonical	0	0	junction_2	448.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACACTTTCCTTGGGAGTG	1267	False	NA	NA	False	NA	NA	NA	80171383	80053265	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_80053431_80064477_80064594_80171206
H1_mix_00083521	chr8	-	551	1	FSM	ENSG00000237264.4	ENST00000517577.2	551	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTCAGGCTAATTTCCC	193	False	NA	NA	False	AATGAA	-5	NA	81522232	81521681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_81521700_81522200
H1_mix_00083522	chr8	-	3403	9	FSM	ENSG00000133731.10	ENST00000256108.10	3369	9	42	-76	0	76	multi-exon	FALSE	canonical	3	194	junction_2	22.2696542406926	271	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTGGTTTACAATGCTA	22	True	NA	NA	False	NA	NA	NA	81686283	81656837	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_81659467_81660515_81660668_81670938_81671048_81673840_81673950_81676233_81676280_81679125_81679231_81680649_81680784_81681497_81681585_81686251
H1_mix_00083526	chr8	-	2457	7	NIC	ENSG00000104231.11	novel	1705	7	NA	NA	0	237	combination_of_known_junctions	FALSE	canonical	3	42	junction_6	128.331168812915	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAATTGAAGTCAATCCT	28	True	NA	81	True	NA	NA	NA	81732345	81701096	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_81702866_81702968_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81718181_81718225_81732198
H1_mix_00083527	chr8	-	2719	4	FSM	ENSG00000104231.11	ENST00000524305.5	2719	4	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_2	27.3536509852382	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAATATCTGAGCCTTCA	6259	False	NA	NA	False	AGTAAA	-26	NA	81715039	81701333	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_81702866_81702968_81703125_81713917_81714896_81714986
H1_mix_00083528	chr8	-	2187	8	FSM	ENSG00000104231.11	ENST00000220669.10	2184	8	0	-3	0	0	multi-exon	FALSE	canonical	3	271	junction_6	40.5814876865935	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAATATCTGAGCCTTCA	-2	True	NA	NA	False	AGTAAA	-26	NA	81721300	81701333	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_81702866_81702968_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81717248_81717289_81718181_81718225_81721226
H1_mix_00083529	chr8	-	2144	8	NIC	ENSG00000104231.11	novel	2184	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_7	107.500735640577	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTAATAATATCTGAGCCT	16	True	NA	NA	False	AGTAAA	-23	NA	81721282	81701336	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_81702866_81702968_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81717248_81717289_81718181_81718225_81721248
H1_mix_00083530	chr8	-	1705	7	FSM	ENSG00000104231.11	ENST00000522520.5	1705	7	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_5	82.3724603385271	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCTATAGGTTTACTTAA	9	True	NA	-61	True	NA	NA	NA	81721289	81701764	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_81702866_81702968_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81718181_81718225_81721226
H1_mix_00083532	chr8	-	633	6	FSM	ENSG00000104231.11	ENST00000517588.5	633	6	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_4	85.7517346763318	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGCATGTTTATTTATT	35	False	NA	-3	True	AATAAA	-18	NA	81721263	81702913	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81718181_81718225_81721226
H1_mix_00083533	chr8	-	2386	7	FSM	ENSG00000104231.11	ENST00000519523.5	698	7	1	-1689	0	109	multi-exon	FALSE	canonical	3	271	junction_5	39.5196856712646	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTGTGACAACTTCTTAAA	11	True	NA	-47	True	NA	NA	NA	81721287	81701224	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81717248_81717289_81718181_81718225_81721226
H1_mix_00083536	chr8	-	3461	9	FSM	ENSG00000104497.15	ENST00000396330.6	3452	9	0	-9	0	3	multi-exon	FALSE	canonical	3	11	junction_8	28.349382709329	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTGTTCATATGTTG	323	False	NA	1	True	AATAAA	-23	NA	81842286	81799577	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_81801594_81802379_81802500_81803091_81803229_81815324_81815395_81823791_81823941_81829429_81829517_81839611_81840083_81840197_81840444_81842121
H1_mix_00083537	chr8	-	3527	8	FSM	ENSG00000104497.15	ENST00000345957.9	3109	8	-415	-3	266	1	multi-exon	FALSE	canonical	3	56	junction_5	9.70167248362837	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGTGTTGTTCATATGT	9	False	NA	-1	True	AATAAA	-21	NA	81842600	81799579	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_81801594_81802379_81802500_81803091_81803229_81815324_81815395_81823791_81823941_81829429_81829517_81839611_81840083_81842121
H1_mix_00083539	chr8	-	991	1	FSM	ENSG00000206228.4	ENST00000509706.1	756	1	60	-295	60	295	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCTGATCGTGACACTGA	NA	False	NA	NA	False	NA	NA	NA	82292319	82291328	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_82291300_82292300
H1_mix_00083540	chr8	-	934	1	FSM	ENSG00000260493.1	ENST00000566000.1	1264	1	-10	340	-10	-340	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCGCCTATAGTCCCAGC	528	False	NA	NA	False	AATACA	-22	NA	85177072	85176138	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_85176100_85177100
H1_mix_00083541	chr8	-	887	4	FSM	ENSG00000176731.12	ENST00000619594.5	887	4	0	0	0	0	multi-exon	FALSE	canonical	3	1674	junction_3	77.7231554228782	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATCAGAGCCCTTTGTTT	-6	True	NA	NA	False	ATTAAA	-17	NA	85220374	85214047	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_85214632_85214920_85215038_85217385_85217503_85220305
H1_mix_00083542	chr8	-	734	3	FSM	ENSG00000176731.12	ENST00000614462.4	734	3	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_1	721.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGGATATTAAATCACTTA	1	True	NA	NA	False	AATATA	-25	NA	85220367	85214076	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_85214632_85217385_85217503_85220305
H1_mix_00083543	chr8	-	359	2	FSM	ENSG00000176731.12	ENST00000615071.1	344	2	0	-15	0	0	multi-exon	FALSE	canonical	3	1862	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTTAATGTACAGGCAT	5234	False	NA	0	True	AATAAA	-33	NA	85215134	85214486	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_85214632_85214920
H1_mix_00083544	chr8	-	564	3	FSM	ENSG00000176731.12	ENST00000611854.4	563	3	0	-1	0	0	multi-exon	FALSE	canonical	3	1742	junction_2	60	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATTTTTAAAAATCTTG	2666	False	NA	-15	True	AATAAA	-18	NA	85217702	85214501	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_85214632_85214920_85215038_85217385
H1_mix_00083545	chr8	-	490	5	FSM	ENSG00000176731.12	ENST00000612809.4	475	5	0	-15	0	0	multi-exon	FALSE	canonical	3	229	junction_4	782.929235308019	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTTAATGTACAGGCAT	-7	True	NA	0	True	AATAAA	-33	NA	85220375	85214486	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_85214632_85214920_85215038_85217385_85217503_85219322_85219364_85220305
H1_mix_00083546	chr8	-	827	2	FSM	ENSG00000176731.12	ENST00000518786.1	827	2	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCCCAAAGTGCTGGGAT	-26	True	NA	NA	False	NA	NA	NA	85220394	85218625	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_85219364_85220305
H1_mix_00083548	chr8	-	2564	3	FSM	ENSG00000147613.8	ENST00000276616.3	2557	3	0	-7	0	7	multi-exon	FALSE	canonical	2	10	junction_1	2	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAAAGAATTTTTTTTTAC	-3	True	NA	NA	False	AATAAA	-28	NA	86069668	86047101	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_86048768_86063964_86064632_86069437
H1_mix_00083549	chr8	-	4270	9	FSM	ENSG00000176623.12	ENST00000519966.5	1164	9	-70	-3036	-65	1363	multi-exon	FALSE	canonical	3	30	junction_2	96.5963735085329	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACATGTAGATTTTTGGTA	0	True	NA	NA	False	TTTAAA	-33	NA	86508751	86470984	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_86474359_86474819_86474915_86477293_86477325_86478922_86479011_86480276_86480333_86486483_86486644_86488551_86488640_86506994_86507113_86508491
H1_mix_00083550	chr8	-	2970	10	FSM	ENSG00000176623.12	ENST00000406452.8	2970	10	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	22.2660678562196	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGACTGTGACCTGTTAT	5671	False	86508706	-11	True	AATAAA	-19	NA	86508686	86472348	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_86474359_86474819_86474954_86477293_86477325_86478922_86479011_86480276_86480333_86484871_86484962_86486483_86486644_86488551_86488640_86506994_86507113_86508491
H1_mix_00083551	chr8	-	1109	9	FSM	ENSG00000176623.12	ENST00000430676.6	1106	9	0	-3	0	0	multi-exon	FALSE	canonical	3	48	junction_5	71.1863751008576	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATGGCTCAGGCAAAG	-17	True	NA	-16	True	AATAAA	-29	NA	86508675	86474108	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_86474359_86474819_86474954_86477293_86477325_86478922_86479011_86480276_86480333_86486483_86486644_86488551_86488640_86506994_86507113_86508491
H1_mix_00083553	chr8	-	2585	8	FSM	ENSG00000156103.16	ENST00000544227.5	1512	8	-477	-596	-200	596	multi-exon	TRUE	canonical	2	6	junction_1	12.6361967928548	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGACAAGTAATTTTTGA	159	False	NA	NA	False	TTTAAA	-28	NA	88327683	88068636	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_88069523_88074604_88074744_88116506_88116719_88118699_88118862_88167668_88167974_88186475_88186599_88197157_88197307_88327074
H1_mix_00083555	chr8	-	631	1	FSM	ENSG00000271156.1	ENST00000604955.1	591	1	61	-101	61	101	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTAATATGTGAGATGAGC	4309	False	NA	NA	False	AAAAAG	-15	NA	88808847	88808216	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_88808200_88808800
H1_mix_00083558	chr8	-	2062	3	FSM	ENSG00000251136.10	ENST00000655144.2	1999	3	-276	213	-186	-20	multi-exon	FALSE	canonical	3	14	junction_2	5.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTTCTTGTTTTCAAA	1374	False	NA	NA	False	NA	NA	NA	89757998	89723982	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_89724967_89725517_89725642_89757044
H1_mix_00083560	chr8	-	4663	17	ISM	ENSG00000104320.14	ENST00000396252.6	4907	19	18567	-2	4	2	3prime_fragment	TRUE	canonical	3	36	junction_14	51.8796684646307	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACTGTATTTAAGTCAA	-18	True	NA	-9	True	AATAAA	-16	NA	89984661	89933333	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_-_89935613_89937025_89937076_89943252_89943367_89946139_89946296_89947823_89947893_89953243_89953692_89955282_89955556_89958724_89958855_89964409_89964508_89970363_89970558_89971172_89971291_89978219_89978324_89980733_89980894_89981374_89981524_89981952_89982003_89982721_89982856_89984524
H1_mix_00083562	chr8	-	2533	11	FSM	ENSG00000104327.7	ENST00000265431.7	2533	11	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_10	27.3569004092203	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGTATTTGTTTTTTC	-1	True	NA	0	True	AATAAA	-22	NA	90082879	90058607	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_90060287_90060628_90060701_90063099_90063154_90063280_90063321_90063405_90063462_90065897_90065976_90068997_90069055_90069153_90069238_90078372_90078448_90082025_90082103_90082618
H1_mix_00083567	chr8	-	5603	2	FSM	ENSG00000180694.14	ENST00000418210.2	4663	2	-940	0	-762	0	multi-exon	FALSE	canonical	3	62	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCGCTTTTCTTTCTTTG	NA	False	NA	-2	True	AATAAA	-19	NA	90646845	90621994	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_90625863_90645110
H1_mix_00083568	chr8	-	1041	6	FSM	ENSG00000253250.3	ENST00000517562.3	1041	6	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_2	34.2660181520993	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTATTTCTTTTCAGATA	-1	True	NA	-17	True	AATAAA	-20	NA	90985238	90958470	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_90959031_90960741_90960849_90971065_90971142_90978578_90978653_90980362_90980462_90985113
H1_mix_00083569	chr8	-	2767	7	FSM	ENSG00000155099.8	ENST00000285419.8	2759	7	0	-8	0	8	multi-exon	FALSE	canonical	3	325	junction_5	38.0336108666474	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACTTGAATATGTACTTT	-3	True	NA	-8	True	AATAAA	-34	NA	91040859	90993793	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_90995821_90996653_90996745_91008742_91008796_91018389_91018514_91020156_91020264_91021255_91021405_91040643
H1_mix_00083572	chr8	-	4186	3	FSM	ENSG00000253738.3	ENST00000522817.3	4935	3	43	706	40	-706	multi-exon	FALSE	canonical	3	65	junction_1	129.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCCTCAAAATCATCTTT	-1	True	NA	NA	False	TTTAAA	-6	NA	91070149	91060023	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_91063747_91069578_91069823_91069930
H1_mix_00083573	chr8	-	5418	2	FSM	ENSG00000253738.3	ENST00000659792.1	5405	2	7	-20	7	20	multi-exon	FALSE	canonical	3	324	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGGCACTACTGACCTT	NA	False	NA	NA	False	AATAAA	-19	NA	91070576	91065050	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_91069823_91069930
H1_mix_00083575	chr8	-	7369	12	ISM	ENSG00000079102.16	ENST00000617740.4	7627	13	428	5	2	3	3prime_fragment	FALSE	canonical	3	6	junction_11	6.68042657122685	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTCCTTGGTCAGTCTA	5	True	NA	-4	True	AATAAA	-20	NA	92095226	91954971	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_-_91960518_91970657_91970849_91975904_91975974_91986123_91986326_91986886_91986973_91991638_91991890_92005115_92005298_92011001_92011092_92014578_92014821_92017225_92017364_92075964_92076138_92095027
H1_mix_00083578	chr8	-	334	1	FSM	ENSG00000233778.3	ENST00000465478.1	348	1	106	-92	106	92	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACAATATAACCACTTTG	128	False	NA	NA	False	AATAAA	-41	NA	92144329	92143995	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_92144000_92144300
H1_mix_00083579	chr8	-	3533	5	NIC	ENSG00000205133.12	novel	1882	6	NA	NA	-3	2	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	46.5799044653378	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGGCATTTACCATTTATG	-5	True	NA	-1	True	AATAAA	-26	NA	92966077	92883529	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_92886668_92891988_92892075_92916928_92917008_92954405_92954565_92966006
H1_mix_00083580	chr8	-	3671	5	FSM	ENSG00000205133.12	ENST00000521988.6	3667	5	0	-4	0	2	multi-exon	FALSE	canonical	3	64	junction_3	23.7526314331697	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGGCATTTACCATTTATG	-4	True	NA	-1	True	AATAAA	-26	NA	92966144	92883529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_92886736_92891988_92892075_92916928_92917011_92954405_92954565_92966006
H1_mix_00083581	chr8	-	3563	5	FSM	ENSG00000205133.12	ENST00000518748.5	3563	5	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	27.8433115846517	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGATGCCTTTTAGTCCTC	-4	True	NA	-13	True	AATAAA	-18	NA	92966144	92883634	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_92886736_92891988_92892075_92916928_92917008_92954405_92954565_92966006
H1_mix_00083585	chr8	-	8423	3	FSM	ENSG00000183808.12	ENST00000519109.6	8423	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	36	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACATTCTTGGTATATT	345	False	NA	-4	True	AATAAA	-19	NA	93740718	93728154	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_93736439_93737306_93737356_93740628
H1_mix_00083587	chr8	-	8530	4	FSM	ENSG00000183808.12	ENST00000520560.6	8530	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	39.1946708395698	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACATTCTTGGTATATT	9	True	NA	-4	True	AATAAA	-19	NA	93741009	93728154	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_93736439_93737306_93737356_93740628_93740697_93740880
H1_mix_00083588	chr8	-	8470	3	FSM	ENSG00000183808.12	ENST00000399300.7	8470	3	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	29.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACATTCTTGGTATATT	1	True	NA	-4	True	AATAAA	-19	NA	93741017	93728154	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_93736439_93737306_93737356_93740880
H1_mix_00083589	chr8	-	354	1	FSM	ENSG00000240509.1	ENST00000466433.1	354	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACGAAACTTTTTTGAGTA	NA	False	NA	NA	False	NA	NA	NA	93957691	93957337	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_93957300_93957700
H1_mix_00083590	chr8	-	2191	5	FSM	ENSG00000164949.8	ENST00000297596.3	2187	5	0	-4	0	4	multi-exon	FALSE	canonical	3	15	junction_4	9.90896059130321	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGATTGATTTTCCTCC	-2	True	NA	NA	False	AATAAA	-27	NA	94262319	94249248	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_94250588_94252018_94252224_94253035_94253113_94260172_94260513_94262089
H1_mix_00083591	chr8	-	2107	5	FSM	ENSG00000164949.8	ENST00000396194.6	2103	5	0	-4	0	4	multi-exon	FALSE	canonical	3	18	junction_4	8.86002257333467	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGATTGATTTTCCTCC	NA	False	NA	NA	False	AATAAA	-27	NA	94262350	94249248	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_94250588_94252018_94252224_94253035_94253113_94260172_94260513_94262204
H1_mix_00083593	chr8	-	3087	15	FSM	ENSG00000197275.14	ENST00000336148.10	3074	15	0	-13	0	13	multi-exon	FALSE	canonical	3	129	junction_12	20.6526175640014	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTTGATTAATACACTTT	2	True	NA	12	True	AATAAA	-34	NA	94475115	94371946	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_94372388_94378179_94378381_94378567_94378635_94380144_94380407_94386983_94387160_94391608_94391900_94393742_94393883_94399413_94399622_94400237_94400464_94404076_94404240_94407438_94407721_94411120_94411316_94458267_94458437_94467404_94467556_94475000
H1_mix_00083596	chr8	-	6078	2	FSM	ENSG00000265817.4	ENST00000481490.3	5391	2	4	-691	4	691	multi-exon	FALSE	canonical	3	41	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCAATTAATGTTTTGCT	3	True	NA	NA	False	NA	NA	NA	94436940	94427024	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_94432657_94436494
H1_mix_00083597	chr8	-	5323	4	FSM	ENSG00000197275.14	ENST00000297592.5	1879	4	0	-3444	0	3444	multi-exon	FALSE	canonical	3	86	junction_1	54.1623075169029	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTTGTGTACTTTTTTT	11	True	NA	-3	True	AATACA	-16	NA	94475062	94427715	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_94432657_94458267_94458437_94467404_94467556_94475000
H1_mix_00083598	chr8	-	6428	24	FSM	ENSG00000164944.12	ENST00000297591.10	6478	24	0	50	0	-50	multi-exon	TRUE	canonical	3	46	junction_19	15.0341765663556	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAGTCTATATAAGTGGC	-4	True	NA	NA	False	NA	NA	NA	94553469	94487738	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_94488861_94489938_94490083_94491577_94491910_94492651_94492819_94494859_94494957_94495730_94495892_94496327_94496481_94499373_94499507_94506499_94506718_94509687_94509941_94510416_94510653_94511184_94511730_94511995_94512090_94514868_94514952_94517787_94517943_94518984_94519477_94526222_94527364_94529069_94529343_94530962_94531086_94534838_94535008_94537102_94537152_94538259_94538347_94543826_94543943_94553384
H1_mix_00083599	chr8	-	553	2	Genic_Genomic	ENSG00000261437.1	novel	2183	1	NA	NA	15	2	multi-exon	FALSE	canonical	3	17	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACATTTTGCTGCCACCG	10	True	NA	-5	True	ATTAAA	-22	NA	94639452	94637282	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr8_-_94637743_94639359
H1_mix_00083600	chr8	-	2185	1	FSM	ENSG00000261437.1	ENST00000562760.1	2183	1	0	-2	0	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACATTTTGCTGCCACCG	-5	True	NA	-5	True	ATTAAA	-22	NA	94639467	94637282	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_94637300_94639500
H1_mix_00083601	chr8	-	2876	12	FSM	ENSG00000175305.18	ENST00000520509.5	3330	12	99	355	99	99	multi-exon	FALSE	canonical	1	1	junction_11	28.5225733425763	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTGATCTTCCAAAACAGA	107	False	NA	NA	False	NA	NA	NA	94896579	94880124	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_94881746_94882131_94882290_94882780_94882893_94885066_94885202_94885462_94885559_94887926_94888074_94890414_94890551_94892817_94892970_94893890_94893945_94894022_94894120_94894207_94894248_94896451
H1_mix_00083605	chr8	-	5631	5	FSM	ENSG00000164938.14	ENST00000448464.6	5631	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	28.9006920332369	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGTCAGATTCTTTTAT	9	True	NA	-2	True	AATAAA	-17	NA	94949366	94925971	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_94930729_94932069_94932108_94939859_94940221_94940829_94941092_94949153
H1_mix_00083606	chr8	-	5605	4	FSM	ENSG00000164938.14	ENST00000342697.5	5605	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	38.7327022323801	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGTCAGATTCTTTTAT	-3	True	NA	-2	True	AATAAA	-17	NA	94949378	94925971	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_94930729_94939859_94940221_94940829_94941092_94949153
H1_mix_00083608	chr8	-	8459	4	FSM	ENSG00000156467.10	ENST00000287022.10	8459	4	0	0	0	0	multi-exon	FALSE	canonical	3	4472	junction_3	633.635191222485	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTTCTGTGTCTGGC	-4	True	NA	NA	False	AATAAA	-16	NA	96235545	96222946	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_96231133_96231773_96231941_96233155_96233228_96235511
H1_mix_00083609	chr8	-	3973	2	FSM	ENSG00000156467.10	ENST00000518876.1	3968	2	0	-5	0	5	multi-exon	FALSE	canonical	3	5381	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTGAATTCCAAACCTT	-3	True	NA	-37	True	AATAAA	-21	NA	96235544	96230930	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_96231133_96231773
H1_mix_00083611	chr8	-	750	3	FSM	ENSG00000156467.10	ENST00000519322.1	750	3	0	0	0	0	multi-exon	FALSE	canonical	3	4472	junction_2	772	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGATTTGACATTTTAAAAA	-4	True	NA	NA	False	NA	NA	NA	96235545	96231296	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_96231941_96233155_96233228_96235511
H1_mix_00083612	chr8	-	1391	7	NIC	ENSG00000156469.9	novel	1463	8	NA	NA	0	268	combination_of_known_splicesites	FALSE	canonical	3	60	junction_6	156.781961122233	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTAATATCTACTGCTC	-8	True	NA	NA	False	NA	NA	NA	96261610	96239129	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_96239686_96243918_96244081_96245859_96245932_96246306_96246455_96250905_96251096_96256961_96257115_96261500
H1_mix_00083613	chr8	-	1467	8	FSM	ENSG00000156469.9	ENST00000287025.4	1463	8	0	-4	0	0	multi-exon	FALSE	canonical	3	394	junction_7	40.0015305829613	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAACCATTTGATACTGTA	-8	True	NA	18	True	AATAAA	-40	NA	96261610	96239397	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_96239686_96243918_96244081_96245859_96245932_96246306_96246455_96250905_96251096_96256961_96257115_96258356_96258701_96261500
H1_mix_00083614	chr8	-	1529	9	FSM	ENSG00000156469.9	ENST00000523821.5	1529	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	195.189611339846	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAACCATTTGATACTGTA	-8	True	NA	18	True	AATAAA	-40	NA	96261610	96239397	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_96239686_96239793_96239856_96243918_96244081_96245859_96245932_96246306_96246455_96250905_96251096_96256961_96257115_96258356_96258701_96261500
H1_mix_00083618	chr8	-	594	4	FSM	ENSG00000156482.11	ENST00000521291.5	575	4	0	-19	0	17	multi-exon	FALSE	canonical	3	5892	junction_1	390.027634348588	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTCTATTTTTGTTTC	588	False	NA	1	True	AATAAA	-38	NA	98045514	98041701	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_98041851_98042644_98042776_98044942_98045089_98045346
H1_mix_00083619	chr8	-	459	5	FSM	ENSG00000156482.11	ENST00000396070.6	440	5	0	-19	0	17	multi-exon	FALSE	canonical	3	275	junction_2	2433.02511033076	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTCTATTTTTGTTTC	0	True	NA	1	True	AATAAA	-38	NA	98045544	98041701	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_98041851_98042644_98042719_98044942_98045089_98045346_98045400_98045507
H1_mix_00083620	chr8	-	517	5	FSM	ENSG00000156482.11	ENST00000287038.8	498	5	0	-19	0	17	multi-exon	FALSE	canonical	3	3950	junction_4	1118.44520987843	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTCTATTTTTGTTTC	-1	True	NA	1	True	AATAAA	-38	NA	98045545	98041701	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_98041851_98042644_98042776_98044942_98045089_98045346_98045400_98045507
H1_mix_00083621	chr8	-	633	5	FSM	ENSG00000156482.11	ENST00000518850.5	614	5	0	-19	0	17	multi-exon	FALSE	canonical	3	12	junction_2	2538.33843291236	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTCTATTTTTGTTTC	-1	True	NA	1	True	AATAAA	-38	NA	98045545	98041701	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_98041851_98042644_98042776_98044826_98045089_98045346_98045400_98045507
H1_mix_00083623	chr8	-	631	3	FSM	ENSG00000156482.11	ENST00000517489.1	631	3	0	0	0	0	multi-exon	FALSE	canonical	3	3950	junction_2	1440.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGCTTTTTAAATCATAA	552	False	NA	NA	False	NA	NA	NA	98045550	98042644	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_98042776_98044942_98045400_98045507
H1_mix_00083624	chr8	-	747	3	FSM	ENSG00000156482.11	ENST00000520998.1	747	3	0	0	0	0	multi-exon	FALSE	canonical	3	3950	junction_2	1282	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAGCCAAACAAACTTG	-1	True	NA	NA	False	NA	NA	NA	98045545	98044432	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_98045089_98045346_98045400_98045507
H1_mix_00083626	chr8	-	997	6	FSM	ENSG00000132541.11	ENST00000254878.8	987	6	0	-10	0	10	multi-exon	FALSE	canonical	3	495	junction_3	53.2616184508132	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTCACTTATTTCTTA	-4	True	NA	-1	True	AATAAA	-25	NA	98117171	98102333	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_98102905_98104488_98104545_98105937_98106007_98106271_98106327_98108645_98108752_98117031
H1_mix_00083630	chr8	-	4403	11	FSM	ENSG00000104361.10	ENST00000430223.7	4402	11	0	-1	0	1	multi-exon	FALSE	canonical	3	10	junction_1	4.53431361950185	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAATGTATTCTTCCCCC	-16	True	NA	2	True	AATAAA	-21	NA	98294235	98189824	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_98193091_98194727_98194823_98195941_98196006_98203107_98203197_98205110_98205247_98212404_98212502_98222478_98222601_98236154_98236215_98252462_98252635_98254018_98254088_98294002
H1_mix_00083632	chr8	-	2879	11	FSM	ENSG00000104375.17	ENST00000419617.7	2833	11	17	-63	0	61	multi-exon	FALSE	canonical	3	94	junction_2	22.7861800221099	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTATATTAGTTAGGACAGG	6	True	NA	61	True	NA	NA	NA	98825671	98454569	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_98456001_98526741_98526918_98547968_98548162_98579663_98579790_98596031_98596170_98706466_98706635_98707146_98707312_98749275_98749391_98767242_98767372_98774738_98774820_98825514
H1_mix_00083633	chr8	-	1489	8	ISM	ENSG00000104375.17	ENST00000419617.7	2833	11	-45	124683	-45	354	5prime_fragment	FALSE	canonical	3	129	junction_4	14.6663574488121	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACGTACCATAGCAGGAG	NA	False	NA	59	True	NA	NA	NA	98825733	98579315	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_-_98579790_98596031_98596170_98706466_98706635_98707146_98707312_98749275_98749391_98767242_98767372_98774738_98774820_98825514
H1_mix_00083635	chr8	-	744	4	FSM	ENSG00000164919.11	ENST00000520468.7	744	4	0	0	0	0	multi-exon	FALSE	canonical	3	2932	junction_3	565.057125922287	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCACTATTTGGTAGCTG	3	True	NA	NA	False	AATAAA	-19	NA	99893707	99877864	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_99878266_99887489_99887619_99891907_99892053_99893638
H1_mix_00083636	chr8	-	572	4	FSM	ENSG00000164919.11	ENST00000520271.5	571	4	0	-1	0	0	multi-exon	FALSE	canonical	3	230	junction_3	1824.80629108955	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGACAGTAAGTCTTTCT	88	False	NA	-13	True	AATAAA	-15	NA	99893622	99878147	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_99878266_99887489_99887619_99891907_99892053_99893442
H1_mix_00083637	chr8	-	433	4	FSM	ENSG00000164919.11	ENST00000297564.6	433	4	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_3	1835.14256182516	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGACAGTAAGTCTTTCT	-4	True	NA	-13	True	AATAAA	-15	NA	99893684	99878147	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_99878266_99887489_99887619_99891907_99892048_99893638
H1_mix_00083639	chr8	-	696	4	FSM	ENSG00000164919.11	ENST00000522940.5	694	4	0	-2	0	0	multi-exon	FALSE	canonical	3	151	junction_3	1861.92469116115	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGACAGTAAGTCTTTC	1	True	NA	-14	True	AATAAA	-14	NA	99893623	99878148	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_99878266_99887489_99887619_99891907_99892053_99893318
H1_mix_00083640	chr8	-	1968	11	FSM	ENSG00000132554.21	ENST00000520923.5	2379	11	0	411	0	-408	multi-exon	TRUE	canonical	0	0	junction_1	1.37477270848675	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACGTAGTAAATAATATTG	NA	False	NA	NA	False	AAGAAA	-36	NA	100080274	100038930	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_100039033_100039961_100040088_100041801_100041917_100047462_100047597_100052801_100052977_100062590_100062753_100063415_100064044_100066166_100066297_100071368_100071538_100072144_100072231_100080133
H1_mix_00083644	chr8	-	592	3	FSM	ENSG00000186106.11	ENST00000521345.1	592	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	42	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTGTGGCCATGTGGAT	16	True	NA	NA	False	NA	NA	NA	100559746	100529586	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_100529861_100533208_100533312_100559531
H1_mix_00083646	chr8	-	3395	14	FSM	ENSG00000070756.17	ENST00000678709.1	3395	14	0	0	0	0	multi-exon	FALSE	canonical	3	6497	junction_10	754.839071371269	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATAAATCTAAACAAAAC	1169	False	NA	NA	False	NA	NA	NA	100721559	100702050	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_100703360_100704296_100704391_100704925_100705057_100705588_100705674_100706650_100706806_100706886_100706998_100709132_100709224_100709458_100709732_100712361_100712458_100712651_100712790_100713086_100713182_100715461_100715602_100717772_100718281_100721390
H1_mix_00083647	chr8	-	3274	15	FSM	ENSG00000070756.17	ENST00000677140.1	3274	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	2096.44730704697	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATAAATCTAAACAAAAC	1083	False	NA	NA	False	NA	NA	NA	100721645	100702050	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_100703360_100704296_100704391_100704925_100705057_100705588_100705674_100706650_100706806_100706886_100706998_100709132_100709224_100709458_100709732_100712361_100712458_100712651_100712790_100713086_100713182_100715470_100715602_100717772_100717889_100718086_100718281_100721390
H1_mix_00083648	chr8	-	3278	14	FSM	ENSG00000070756.17	ENST00000677775.1	3278	14	0	0	0	0	multi-exon	FALSE	canonical	3	6656	junction_12	737.565810923871	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGTTTTATGTAAAAGGC	-1	True	NA	NA	False	NA	NA	NA	100722087	100702794	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_100703360_100704296_100704391_100704925_100705057_100705588_100705674_100706650_100706806_100706886_100706998_100709132_100709224_100709458_100709732_100712361_100712458_100712651_100713182_100715461_100715602_100717772_100717889_100718086_100718281_100721390
H1_mix_00083649	chr8	-	2877	16	FSM	ENSG00000070756.17	ENST00000520142.2	2877	16	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_15	1998.80197006996	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGTTTTATGTAAAAGGC	-6	True	NA	NA	False	NA	NA	NA	100722092	100702794	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_100703360_100704296_100704391_100704925_100705057_100705588_100705674_100706650_100706806_100706886_100706998_100709132_100709224_100709458_100709732_100712361_100712458_100712651_100712790_100713086_100713182_100715461_100715602_100717772_100717889_100718086_100718281_100721390_100721620_100721728
H1_mix_00083650	chr8	-	971	6	FSM	ENSG00000070756.17	ENST00000520868.5	971	6	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	3381.33177313318	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGATTTGCTTTTTTTCA	8930	False	NA	-16	True	AATAAA	-17	NA	100706931	100702915	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_100703360_100704279_100704391_100704925_100705057_100705588_100705674_100706650_100706806_100706886
H1_mix_00083651	chr8	-	2861	15	FSM	ENSG00000070756.17	ENST00000318607.10	2861	15	0	0	0	0	multi-exon	FALSE	canonical	3	6497	junction_10	768.935949802036	2328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGATTTGCTTTTTTTCA	-2	True	NA	-16	True	AATAAA	-17	NA	100722088	100702915	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_100703360_100704296_100704391_100704925_100705057_100705588_100705674_100706650_100706806_100706886_100706998_100709132_100709224_100709458_100709732_100712361_100712458_100712651_100712790_100713086_100713182_100715461_100715602_100717772_100717889_100718086_100718281_100721390
H1_mix_00083652	chr8	-	1491	3	FSM	ENSG00000070756.17	ENST00000677285.1	1491	3	0	0	0	0	multi-exon	FALSE	canonical	3	7486	junction_2	1033.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAGTAAAATATAAAAACAAA	9856	False	NA	84	True	TTTAAA	-21	NA	100705695	100703137	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_100704391_100704925_100705057_100705588
H1_mix_00083654	chr8	-	3116	14	FSM	ENSG00000070756.17	ENST00000523555.6	3116	14	0	0	0	0	multi-exon	FALSE	canonical	3	6497	junction_9	797.822561874936	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGGACTTTCAGGTGGT	141	False	NA	4	True	ATTAAA	-35	NA	100722587	100704096	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_100704391_100704925_100705057_100705588_100705674_100706650_100706806_100706886_100706998_100709132_100709224_100709458_100709732_100712361_100712458_100712651_100712790_100713086_100713182_100715461_100715602_100717772_100717889_100718086_100718281_100721390
H1_mix_00083657	chr8	-	2998	6	FSM	ENSG00000164924.18	ENST00000395951.7	964	6	17	-2051	0	0	multi-exon	FALSE	canonical	3	242	junction_5	1715.17112848835	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTTGGGGTCTTTATTT	6242	False	NA	-37	True	AATAAA	-11	NA	100950540	100918578	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100948595_100948901_100950405
H1_mix_00083658	chr8	-	3007	6	FSM	ENSG00000164924.18	ENST00000457309.2	3007	6	0	0	0	0	multi-exon	FALSE	canonical	3	750	junction_5	1513.1360282539	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTTGGGGTCTTTATTT	-30	True	NA	-37	True	AATAAA	-11	NA	100952993	100918578	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100948595_100948901_100952849
H1_mix_00083659	chr8	-	3378	8	NIC	ENSG00000164924.18	novel	5248	7	NA	NA	10	0	intron_retention	FALSE	canonical	3	17	junction_7	1954.32850830339	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTTGGGGTCTTTATTT	-5	True	NA	-37	True	AATAAA	-11	NA	100953378	100918578	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100948595_100948901_100951928_100952126_100952849_100953058_100953268
H1_mix_00083660	chr8	-	3592	7	NNC	ENSG00000164924.18	novel	5248	7	NA	NA	10	0	intron_retention	FALSE	canonical	3	20	junction_6	1646.62541277608	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTTGGGGTCTTTATTT	-5	True	NA	-37	True	AATAAA	-11	NA	100953378	100918578	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100948595_100948901_100951928_100952129_100952849
H1_mix_00083661	chr8	-	2924	6	FSM	ENSG00000164924.18	ENST00000395956.7	2974	6	50	0	50	0	multi-exon	FALSE	canonical	3	389	junction_5	1656.67891880111	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTTTTGTTGCTTGTTT	6	True	NA	-14	True	NA	NA	NA	100951399	100918682	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100948595_100948901_100951234
H1_mix_00083663	chr8	-	2832	6	FSM	ENSG00000164924.18	ENST00000353245.7	2829	6	0	-3	0	0	multi-exon	FALSE	canonical	3	221	junction_5	1723.52886833961	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTTTTGTTGCTTGTTT	-5	True	NA	-14	True	NA	NA	NA	100953341	100918682	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100948595_100948901_100953268
H1_mix_00083665	chr8	-	3084	6	FSM	ENSG00000164924.18	ENST00000419477.6	891	6	-130	-2063	43	0	multi-exon	FALSE	canonical	3	118	junction_5	1764.52740415104	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTTGGGGTCTTTATTT	-1	True	NA	-37	True	AATAAA	-11	NA	100951406	100918578	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100948595_100948901_100951185
H1_mix_00083666	chr8	-	3160	1	FSM	ENSG00000261087.1	ENST00000565617.1	2825	1	-352	17	-352	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTCCTTTGATGAATAC	NA	False	NA	-18	True	AATAAA	-3	NA	101169981	101166821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_101166800_101170000
H1_mix_00083667	chr8	-	2675	4	FSM	ENSG00000120963.12	ENST00000311212.9	2672	4	0	-3	0	3	multi-exon	TRUE	canonical	3	1474	junction_2	42.7733042393916	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAGTCTAATTTCTTCTA	-25	True	NA	NA	False	ATTAAA	-21	NA	101205673	101197048	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_101199240_101199989_101200098_101201606_101201744_101205434
H1_mix_00083669	chr8	-	3502	4	FSM	ENSG00000120963.12	ENST00000520347.5	3502	4	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_3	636.399769536937	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCACAGGATAAATGGTTT	950	False	NA	-29	True	AATAAA	-20	NA	101205287	101198937	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_101199240_101199989_101200098_101201606_101201744_101202332
H1_mix_00083670	chr8	-	960	5	FSM	ENSG00000120963.12	ENST00000519882.5	959	5	0	-1	0	0	multi-exon	FALSE	canonical	3	18	junction_4	716.959683315596	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCACAGGATAAATGGTTT	505	False	NA	-29	True	AATAAA	-20	NA	101205732	101198937	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_101199240_101199989_101200098_101201606_101201744_101202332_101202448_101205434
H1_mix_00083675	chr8	-	4776	9	FSM	ENSG00000048392.13	ENST00000251810.8	4774	9	0	-2	0	2	multi-exon	FALSE	canonical	3	395	junction_1	40.7001228499374	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTGTCTGCAGATAAATA	-20	True	NA	0	True	AATAAA	-20	NA	102238961	102204499	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_102208286_102212775_102212890_102214053_102214159_102218813_102218948_102224045_102224141_102224884_102225019_102225917_102226035_102232148_102232305_102238826
H1_mix_00083677	chr8	-	1288	8	FSM	ENSG00000048392.13	ENST00000395912.6	900	8	0	-388	0	0	multi-exon	FALSE	canonical	3	26	junction_7	159.675947353586	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATTAGGATGCAAAAATAAA	914	False	NA	NA	False	TTTAAA	-44	NA	102238874	102207744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_102208286_102212775_102212890_102214053_102214159_102218813_102218948_102224045_102224141_102224884_102225019_102225917_102226035_102238826
H1_mix_00083678	chr8	-	10895	59	FSM	ENSG00000104517.13	ENST00000520539.6	10895	59	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_21	94.3708829845908	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTCTTTTGGTCTTGTTT	13	True	NA	-19	True	AATAAA	-16	NA	102412700	102252272	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_102254515_102257631_102257718_102258984_102259130_102261145_102261260_102261914_102262071_102264473_102264559_102265099_102265279_102266946_102267008_102268977_102269109_102270038_102270184_102271133_102271246_102272528_102272773_102275520_102275620_102275707_102275829_102276971_102277193_102278825_102278940_102279035_102279209_102280393_102280468_102281288_102281520_102285126_102285339_102285512_102285782_102286359_102286618_102287432_102287565_102288154_102288267_102289452_102289577_102293604_102293845_102293954_102294116_102294981_102295112_102295203_102295331_102295413_102295533_102295635_102295783_102296892_102296985_102297457_102297607_102298391_102298490_102298847_102298972_102299451_102299548_102299999_102300152_102304042_102304170_102305084_102305296_102311298_102311497_102311734_102311890_102312133_102312246_102312341_102312486_102313803_102313917_102314743_102314854_102323310_102323496_102326545_102326664_102327741_102327897_102329089_102329201_102329282_102329400_102342472_102342685_102345395_102345546_102346235_102346396_102346902_102347093_102360070_102360191_102360588_102360666_102361124_102361207_102361581_102361627_102412172
H1_mix_00083679	chr8	-	9418	59	FSM	ENSG00000104517.13	ENST00000220959.8	9418	59	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	97.8286573300786	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAGGATATTAAATGATAT	24	True	NA	NA	False	TATAAA	-34	NA	102412689	102253735	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_102254515_102257631_102257718_102258984_102259130_102261145_102261260_102261914_102262071_102264473_102264559_102265099_102265276_102266946_102267008_102268977_102269109_102270038_102270184_102271133_102271246_102272528_102272773_102275520_102275620_102275707_102275829_102276971_102277193_102278825_102278940_102279035_102279209_102280393_102280468_102281288_102281520_102285126_102285339_102285512_102285782_102286359_102286618_102287432_102287565_102288154_102288267_102289452_102289577_102293604_102293845_102293954_102294116_102294981_102295112_102295203_102295331_102295413_102295533_102295635_102295783_102296892_102296985_102297457_102297607_102298391_102298490_102298847_102298972_102299451_102299548_102299999_102300152_102304042_102304170_102305084_102305296_102311298_102311497_102311734_102311890_102312133_102312246_102312341_102312486_102313803_102313917_102314743_102314854_102323310_102323496_102326545_102326664_102327741_102327897_102329089_102329201_102329282_102329400_102342472_102342685_102345395_102345546_102346235_102346396_102346902_102347093_102360070_102360191_102360588_102360666_102361124_102361207_102361581_102361627_102412172
H1_mix_00083680	chr8	-	1095	6	FSM	ENSG00000104517.13	ENST00000517465.1	1095	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	228.432046788536	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAGAGGGAATAGGGAATT	NA	False	NA	-66	True	NA	NA	NA	102261986	102253945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_102254515_102257631_102257718_102258315_102258425_102258984_102259130_102261145_102261260_102261914
H1_mix_00083681	chr8	-	9001	59	FSM	ENSG00000104517.13	ENST00000521922.5	9008	59	7	0	7	0	multi-exon	FALSE	canonical	0	0	junction_21	99.867712738214	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGGTACCTTAAAGAGAT	141	False	NA	NA	False	TATAAA	-33	NA	102412752	102254197	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_102254515_102257631_102257718_102258984_102259130_102261145_102261260_102261914_102262071_102264473_102264559_102265099_102265276_102266946_102267008_102268977_102269109_102270038_102270184_102271133_102271246_102272528_102272773_102275520_102275620_102275707_102275829_102276971_102277193_102278825_102278940_102279035_102279209_102280393_102280468_102281288_102281520_102285126_102285339_102285512_102285782_102286359_102286618_102287432_102287565_102288154_102288267_102289452_102289577_102293604_102293845_102293954_102294116_102294981_102295112_102295203_102295331_102295413_102295533_102295635_102295783_102296892_102296985_102297457_102297607_102298391_102298490_102298847_102298972_102299451_102299548_102299999_102300152_102304042_102304170_102305084_102305296_102311298_102311497_102311734_102311890_102312133_102312246_102312341_102312486_102313803_102313917_102314743_102314854_102323310_102323496_102326545_102326664_102327741_102327897_102329089_102329201_102329282_102329400_102342472_102342667_102345395_102345546_102346235_102346396_102346902_102347093_102360070_102360191_102360588_102360666_102361124_102361207_102361581_102361627_102412172
H1_mix_00083683	chr8	-	8694	59	NIC	ENSG00000104517.13	novel	10895	59	NA	NA	2	-212	combination_of_known_junctions	FALSE	canonical	0	0	junction_21	99.8966945590733	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAATACTTGCATTTCTCG	206	False	NA	NA	False	NA	NA	NA	102412687	102254409	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_102254515_102257631_102257718_102258984_102259130_102261145_102261260_102261914_102262071_102264473_102264559_102265099_102265279_102266946_102267008_102268977_102269109_102270038_102270184_102271133_102271246_102272528_102272773_102275520_102275620_102275707_102275829_102276971_102277193_102278825_102278940_102279035_102279209_102280393_102280468_102281288_102281520_102285126_102285339_102285512_102285782_102286359_102286618_102287432_102287565_102288154_102288267_102289452_102289577_102293604_102293845_102293954_102294116_102294981_102295112_102295203_102295331_102295413_102295533_102295635_102295783_102296892_102296985_102297457_102297607_102298391_102298490_102298847_102298972_102299451_102299497_102299999_102300152_102304042_102304170_102305084_102305296_102311298_102311497_102311734_102311890_102312133_102312246_102312341_102312486_102313803_102313917_102314743_102314854_102323310_102323496_102326545_102326664_102327741_102327897_102329089_102329201_102329282_102329400_102342472_102342685_102345395_102345546_102346235_102346396_102346902_102347093_102360070_102360191_102360588_102360666_102361124_102361207_102361581_102361627_102412172
H1_mix_00083686	chr8	-	3668	4	FSM	ENSG00000155090.15	ENST00000395884.3	3659	4	0	-9	0	7	multi-exon	FALSE	canonical	3	7	junction_3	48.1456124688429	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTCATTGCATTTCTTAAA	1554	False	NA	2	True	AATAAA	-23	NA	102654375	102648776	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_102650392_102651148_102652062_102652163_102652398_102653469
H1_mix_00083689	chr8	-	4196	12	FSM	ENSG00000155096.15	ENST00000337198.10	4196	12	0	0	0	0	multi-exon	FALSE	canonical	2	1104	junction_10	252.398347102026	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTATGTGTATTAACAAT	0	True	NA	-5	True	AATAGA	-20	NA	102864163	102826307	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_102828679_102829271_102829487_102829820_102829937_102833055_102833219_102834188_102834264_102834665_102834748_102836255_102836391_102838743_102838917_102839649_102839824_102843550_102843748_102858012_102858151_102863806
H1_mix_00083690	chr8	-	4282	13	FSM	ENSG00000155096.15	ENST00000347770.8	2857	13	30	-1455	0	0	multi-exon	FALSE	canonical	2	587	junction_10	453.562258374991	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTCCTCATGTTTTACT	0	True	NA	33	True	GATAAA	-5	NA	102864163	102826367	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_102828679_102829271_102829487_102829820_102829937_102833055_102833219_102834188_102834264_102834665_102834748_102836255_102836391_102838743_102838917_102839649_102839824_102843550_102843748_102849998_102850145_102858012_102858151_102863806
H1_mix_00083692	chr8	-	3280	4	FSM	ENSG00000247081.8	ENST00000653502.1	3280	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	4.64279609239471	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACAATGCTATTATTTCA	-19	True	NA	NA	False	NA	NA	NA	103298764	103264798	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_103267521_103268390_103268473_103285837_103285898_103298348
H1_mix_00083693	chr8	-	1522	4	FSM	ENSG00000247081.8	ENST00000669482.1	1522	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	9.80929264637477	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACATACACACATCAAAAG	-1	True	NA	NA	False	NA	NA	NA	103298746	103266543	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_103267521_103268390_103268473_103285837_103285903_103298348
H1_mix_00083695	chr8	-	2891	7	FSM	ENSG00000164933.12	ENST00000297578.9	2891	7	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_4	12.5255294853706	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCTTGTGTGATAGATAA	28	True	NA	-1	True	AATAAA	-28	NA	103415107	103398637	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_103400547_103401515_103401662_103401940_103402055_103403163_103403325_103404775_103404862_103407633_103407785_103414783
H1_mix_00083699	chr8	-	5120	6	FSM	ENSG00000147650.12	ENST00000424843.6	4092	6	-234	-794	0	794	multi-exon	FALSE	canonical	3	32	junction_5	21.7752152687407	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCACAAAGCTATTTATTAA	8	True	NA	NA	False	NA	NA	NA	104589258	104488436	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_104491540_104495076_104495210_104496971_104498077_104499316_104499520_104508938_104509075_104588818
H1_mix_00083700	chr8	-	4978	7	FSM	ENSG00000147650.12	ENST00000276654.10	4378	7	263	-863	0	858	multi-exon	FALSE	canonical	3	55	junction_5	12.1575308165579	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTCCATATTATTTGG	9	True	NA	NA	False	AATAAA	-37	NA	104588995	104488372	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_104491540_104495076_104495210_104496971_104498077_104499316_104499520_104508938_104509075_104531906_104531964_104588818
H1_mix_00083701	chr8	-	266	1	FSM	ENSG00000253676.1	ENST00000524097.1	587	1	271	50	271	-50	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCATCTCAGGCAGGCATG	327	False	NA	NA	False	NA	NA	NA	106697742	106697476	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_106697500_106697700
H1_mix_00083704	chr8	-	3084	6	FSM	ENSG00000147655.12	ENST00000276659.10	3084	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.1540659228538	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGTGGAGATTTCTTT	-4	True	NA	0	True	ATTAAA	-14	NA	108083620	107899315	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_107901191_107958079_107958269_107960673_107960818_107989055_107989245_108082544_108082808_108083196
H1_mix_00083705	chr8	-	2022	13	FSM	ENSG00000104408.11	ENST00000220849.10	2022	13	0	0	0	0	multi-exon	FALSE	canonical	3	3496	junction_4	285.309322879962	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCATGGTATTGATGTG	-2	True	NA	NA	False	NA	NA	NA	108248717	108201215	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108248612
H1_mix_00083706	chr8	-	1732	14	FSM	ENSG00000104408.11	ENST00000518100.6	1732	14	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_13	1362.911224518	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCAGTTTTCTTGCAT	-1	True	NA	-24	True	AATAAA	-18	NA	108248716	108201739	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108242111_108242347_108248612
H1_mix_00083707	chr8	-	1161	10	FSM	ENSG00000104408.11	ENST00000521297.2	1158	10	0	-3	0	0	multi-exon	FALSE	canonical	3	48	junction_3	1267.20611320074	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCAGTTTTCTTGCAT	-4	True	NA	-24	True	AATAAA	-18	NA	108248719	108201739	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108248612
H1_mix_00083708	chr8	-	1504	13	FSM	ENSG00000104408.11	ENST00000676698.1	1501	13	0	-3	0	0	multi-exon	FALSE	canonical	3	82	junction_1	1089.03827029479	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCAGTTTTCTTGCAT	NA	False	NA	-24	True	AATAAA	-18	NA	108248730	108201739	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_108201924_108202989_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108248612
H1_mix_00083709	chr8	-	7955	13	FSM	ENSG00000104408.11	ENST00000677965.1	7938	13	0	-17	0	0	multi-exon	FALSE	canonical	3	242	junction_12	1028.5665861879	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTGAAGAATTGGAATAAA	5	True	NA	17	True	TATAAA	-40	NA	108248710	108201776	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108242111
H1_mix_00083710	chr8	-	1485	13	FSM	ENSG00000104408.11	ENST00000522445.6	1485	13	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_11	1096.95297681046	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTGAAGAATTGGAATAAA	-3	True	NA	17	True	TATAAA	-40	NA	108248718	108201776	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240099_108241798_108241914_108248612
H1_mix_00083711	chr8	-	2485	12	FSM	ENSG00000104408.11	ENST00000678901.1	2485	12	0	0	0	0	multi-exon	FALSE	canonical	3	3496	junction_3	288.585979854523	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTTACATTTTGGAAACA	-3	True	NA	-19	True	AATAAA	-17	NA	108248718	108201812	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108248612
H1_mix_00083713	chr8	-	4662	11	FSM	ENSG00000104408.11	ENST00000676530.1	4653	11	0	-9	0	0	multi-exon	FALSE	canonical	3	3496	junction_4	279.446238121038	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGATGAAAAAAAAAAC	5122	False	NA	-80	True	CATAAA	-1	NA	108243593	108201873	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957
H1_mix_00083715	chr8	-	4050	6	FSM	ENSG00000104408.11	ENST00000677447.1	4050	6	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	1639.94165749883	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTAGACATGTATTCTTC	NA	False	NA	0	True	ATTAAA	-19	NA	108248730	108230121	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_108233673_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108248612
H1_mix_00083716	chr8	-	6283	2	FSM	ENSG00000164841.5	ENST00000297459.4	6283	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGGTTTGTCATTCTTCT	-7	True	NA	0	True	ATTAAA	-19	NA	108787594	108778973	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_108785138_108787475
H1_mix_00083718	chr8	-	2542	9	FSM	ENSG00000120526.12	ENST00000676569.1	2542	9	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_2	31.1648840844948	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATTATAGGGGAATTCTA	-33	True	NA	NA	False	NA	NA	NA	109334121	109244349	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_109245482_109271004_109271131_109275351_109275497_109280967_109281173_109289750_109289934_109293343_109293525_109296383_109296570_109322308_109322464_109333892
H1_mix_00083719	chr8	-	6054	4	FSM	ENSG00000164794.9	ENST00000524391.6	6912	4	0	858	0	-858	multi-exon	FALSE	canonical	2	3	junction_1	1.69967317119759	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAATGGGATTGCTGGAT	-2	True	NA	-11	True	AATAAA	-28	NA	109975771	109964493	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_109968600_109972257_109972788_109973927_109975193_109975618
H1_mix_00083720	chr8	-	411	2	Intergenic	novelGene_1496	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	281	junction_1	0	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTTTATGCGGTTATCA	NA	False	NA	NA	False	NA	NA	NA	115217938	115212252	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_-_115212438_115217712
H1_mix_00083721	chr8	-	3984	8	FSM	ENSG00000147677.12	ENST00000521861.6	3961	8	0	-23	0	23	multi-exon	FALSE	canonical	3	1614	junction_4	62.1334968319942	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAAATCTCACTG	-11	True	NA	21	True	AATAAA	-39	NA	116755823	116642106	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_116645104_116646470_116646604_116648805_116648927_116655855_116656006_116657214_116657315_116658812_116658981_116726015_116726173_116755665
H1_mix_00083724	chr8	-	594	2	FSM	ENSG00000147677.12	ENST00000517974.1	594	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCTGGTGGAACTAGACC	-11	True	NA	NA	False	NA	NA	NA	116755823	116658544	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_116658981_116755665
H1_mix_00083732	chr8	-	9247	7	NIC	ENSG00000177570.15	novel	782	5	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	10.2374584519575	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAAAGCGTTTTGATTCT	-6	True	NA	-5	True	ATTAAA	-21	NA	118621949	118189461	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_118197733_118239714_118239976_118241151_118241271_118379559_118379701_118439831_118439962_118580714_118580894_118621803
H1_mix_00083733	chr8	-	978	5	FSM	ENSG00000177570.15	ENST00000453675.7	978	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	7.94905654779232	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGCAATTCTGCAATCT	NA	False	NA	-21	True	NA	NA	NA	118439861	118197305	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_118197733_118239714_118239976_118241151_118241271_118379559_118379701_118439831
H1_mix_00083734	chr8	-	2087	5	FSM	ENSG00000164761.9	ENST00000297350.9	2087	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	1.80277563773199	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTTTTTCTGTTGCTTTT	-1	True	NA	-4	True	ATTAAA	-20	NA	118951885	118923556	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_118924763_118926493_118926719_118928737_118928930_118932930_118933301_118951791
H1_mix_00083736	chr8	-	3095	25	FSM	ENSG00000136960.13	ENST00000075322.11	3086	25	0	-9	0	9	multi-exon	FALSE	canonical	3	17	junction_24	14.1860161974938	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGGCTTTTATTTCACT	1	True	NA	-1	True	AATAAA	-26	NA	119638839	119557076	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_119557692_119562856_119563014_119564822_119564956_119568174_119568253_119569234_119569371_119570704_119570842_119580115_119580168_119582417_119582603_119583716_119583805_119583961_119584050_119586185_119586314_119587043_119587076_119590504_119590631_119593751_119593861_119600677_119600751_119601396_119601463_119607921_119607978_119616264_119616385_119617163_119617244_119617465_119617564_119619243_119619305_119621393_119621520_119626564_119626721_119638424_119638528_119638747
H1_mix_00083737	chr8	-	3116	25	NIC	ENSG00000136960.13	novel	3271	26	NA	NA	89	9	combination_of_known_junctions	FALSE	canonical	3	32	junction_7	10.2854232074113	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGGCTTTTATTTCACT	309	False	NA	-1	True	AATAAA	-26	NA	119673364	119557076	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_119557692_119562856_119563014_119564822_119564956_119568174_119568253_119569234_119569371_119570704_119570842_119580115_119580168_119582417_119582603_119583716_119583805_119583961_119584050_119586185_119586314_119587043_119587076_119590504_119590631_119593751_119593861_119600677_119600751_119601396_119601463_119607921_119607978_119616264_119616385_119617163_119617244_119617465_119617564_119619243_119619305_119621393_119621520_119626564_119626721_119638424_119638528_119673251
H1_mix_00083738	chr8	-	3288	25	NIC	ENSG00000136960.13	novel	3271	26	NA	NA	-118	-13	combination_of_known_junctions	FALSE	canonical	3	26	junction_7	11.1522761752428	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATTCAGTTTTTTCTGG	102	False	NA	-24	True	AATAAA	-3	NA	119673571	119557099	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_119557692_119562856_119563014_119564822_119564956_119568174_119568253_119569234_119569371_119570704_119570842_119580115_119580168_119582429_119582603_119583716_119583805_119583961_119584050_119586185_119586314_119587043_119587076_119590504_119590631_119593751_119593861_119600677_119600751_119601396_119601463_119607921_119607978_119616264_119616385_119617163_119617244_119617465_119617564_119619243_119619305_119621393_119621520_119626564_119626721_119638424_119638528_119673251
H1_mix_00083739	chr8	-	5008	26	FSM	ENSG00000064313.13	ENST00000691057.1	5006	26	17	-19	4	0	multi-exon	FALSE	canonical	2	6	junction_25	30.9286663146021	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCTGTCTTTGTAGCTT	10	True	NA	-18	True	AATAAA	-17	NA	119832828	119730773	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_119732187_119742533_119742657_119744287_119744394_119746704_119746935_119756005_119756116_119758072_119758143_119760598_119760739_119762414_119762609_119778018_119778130_119781052_119781194_119783380_119783634_119785200_119785267_119788337_119788448_119788789_119788905_119789591_119789747_119791323_119791460_119793365_119793452_119795531_119795632_119796989_119797104_119797661_119797847_119801793_119802026_119803877_119804020_119806282_119806402_119819345_119819507_119831676_119831722_119832477
H1_mix_00083740	chr8	-	6825	26	FSM	ENSG00000064313.13	ENST00000378164.7	5027	26	0	-1798	0	1798	multi-exon	TRUE	canonical	0	0	junction_25	31.9263151647665	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCATTGTGTCCTTTGCC	-3	True	NA	NA	False	AATGAA	-10	NA	119832841	119728975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_119732187_119742533_119742657_119744287_119744394_119746704_119746935_119756005_119756116_119758072_119758143_119760598_119760739_119762414_119762609_119778018_119778130_119781052_119781194_119783380_119783634_119785200_119785267_119788337_119788448_119788789_119788905_119789591_119789747_119791323_119791460_119793365_119793452_119795531_119795632_119796989_119797104_119797661_119797847_119801793_119802026_119803877_119804020_119806282_119806402_119819345_119819507_119831676_119831732_119832481
H1_mix_00083741	chr8	-	5027	26	NNC	ENSG00000064313.13	novel	5027	26	NA	NA	0	0	intron_retention	FALSE	non_canonical	1	40	junction_25	25.5629732230036	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCTGTCTTTGTAGCTT	-3	True	NA	-18	True	AATAAA	-17	NA	119832841	119730773	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_119732187_119742533_119742657_119744287_119744394_119746704_119746935_119756005_119756116_119758072_119758143_119760598_119760739_119762414_119762609_119778018_119778130_119781052_119781194_119783380_119783634_119785200_119785267_119788337_119788448_119788789_119788905_119789591_119789747_119791323_119791460_119793365_119793452_119795531_119795632_119796989_119797104_119797661_119797847_119801793_119802026_119803877_119804020_119806282_119806402_119819345_119819507_119831676_119831731_119832480
H1_mix_00083743	chr8	-	2198	9	FSM	ENSG00000136982.6	ENST00000313655.5	2198	9	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_7	19.0394327646598	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGGATTATATGATATATA	-4	True	NA	-40	True	AATAAA	-15	NA	119855894	119833975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_119835002_119838258_119838408_119841793_119841949_119842775_119842829_119843608_119843748_119846989_119847081_119850381_119850517_119853046_119853216_119855613
H1_mix_00083744	chr8	-	1932	1	FSM	ENSG00000279347.1	ENST00000623964.1	1650	1	-121	-161	-121	161	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTCTTTGTATGAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	119840506	119838574	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_119838600_119840500
H1_mix_00083745	chr8	-	703	2	FSM	ENSG00000136982.6	ENST00000521795.1	703	2	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAGTAGATTTTGCTGT	32	True	NA	NA	False	NA	NA	NA	119855858	119852757	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_119853216_119855613
H1_mix_00083746	chr8	-	1260	7	FSM	ENSG00000172172.8	ENST00000306185.8	1260	7	0	0	0	0	multi-exon	FALSE	canonical	3	1672	junction_1	70.2724855275678	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACTTAGATTGGGGTGCT	-2	True	NA	NA	False	NA	NA	NA	120445150	120395436	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_120396126_120413990_120414113_120419851_120419939_120425305_120425367_120432029_120432124_120443184_120443309_120445067
H1_mix_00083747	chr8	-	1418	6	FSM	ENSG00000172172.8	ENST00000518696.5	1418	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	692.265440420075	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACTTAGATTGGGGTGCT	-13	True	NA	NA	False	NA	NA	NA	120445402	120395436	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_120396126_120413990_120414113_120419851_120419939_120425305_120425367_120443184_120443309_120445067
H1_mix_00083748	chr8	-	633	6	FSM	ENSG00000172172.8	ENST00000518918.1	633	6	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_5	688.908818349715	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTGTTTCCCTTCTTCT	297	False	NA	68	True	AATAGA	-25	NA	120445092	120413990	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_120414113_120419851_120419939_120425305_120425367_120432029_120432124_120443184_120443309_120444947
H1_mix_00083755	chr8	-	4240	4	FSM	ENSG00000170961.7	ENST00000303924.5	4240	4	0	0	0	0	multi-exon	FALSE	canonical	3	2489	junction_1	243.028576280422	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGCCTTTTTTTCTAAG	-2	True	NA	-36	True	AATAAA	-16	NA	121641440	121612115	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_121615039_121617104_121617207_121628713_121629341_121640852
H1_mix_00083756	chr8	-	648	1	FSM	ENSG00000272384.1	ENST00000607710.1	860	1	134	78	134	-78	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAATTTCTGACATACCC	2535	False	NA	-91	True	NA	NA	NA	122780696	122780048	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_122780000_122780700
H1_mix_00083758	chr8	-	3028	8	FSM	ENSG00000136986.10	ENST00000405944.7	1994	8	-233	-801	-53	-178	multi-exon	FALSE	canonical	3	6	junction_2	122.542620657268	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTGTCTGTGTTAAGTT	-3	True	NA	-21	True	ATTAAA	-13	NA	123042355	123013347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_123015586_123019194_123019246_123021446_123021500_123022683_123022780_123023712_123023740_123024985_123025051_123030604_123030717_123041969
H1_mix_00083759	chr8	-	5510	6	FSM	ENSG00000136986.10	ENST00000524119.1	5513	6	3	0	3	0	multi-exon	FALSE	canonical	3	321	junction_5	27.405109012737	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCTTTTCACACAGTTAT	NA	False	NA	-1	True	AATAAA	-15	NA	123030716	123014148	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_123019306_123021446_123021500_123022683_123022780_123023712_123023740_123024985_123025051_123030604
H1_mix_00083760	chr8	-	1313	6	FSM	ENSG00000189376.12	ENST00000276704.6	1310	6	0	-3	0	3	multi-exon	FALSE	canonical	3	174	junction_4	13.6879509058149	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGCATTCAGTTTATGT	-17	True	NA	-16	True	TATAAA	-25	NA	123241377	123219963	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_123220298_123226499_123226633_123231299_123231758_123237797_123237942_123239048_123239145_123241229
H1_mix_00083761	chr8	-	1254	5	FSM	ENSG00000259305.6	ENST00000357082.8	1257	5	1	2	1	-2	multi-exon	FALSE	canonical	1	1	junction_4	81.7694930888042	311	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTGTAGCAGTTCTAT	8134	False	NA	-1	True	AATAAA	-19	NA	123267386	123226190	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_123226633_123231299_123231758_123237797_123237942_123239048_123239145_123267272
H1_mix_00083763	chr8	-	5201	4	FSM	ENSG00000165156.15	ENST00000297857.3	5200	4	0	-1	0	1	multi-exon	FALSE	canonical	0	0	junction_3	18.9267594221045	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTTTTTTCATTTTAT	1033	False	NA	NA	False	AATAAA	-26	NA	123274487	123248449	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_123250321_123253321_123256172_123267272_123267387_123274121
H1_mix_00083764	chr8	-	4125	3	ISM	ENSG00000165156.15	ENST00000395571.8	4899	4	-198	3973	0	0	5prime_fragment	FALSE	canonical	3	40	junction_2	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTGGCATGTTCCTTAA	1036	False	NA	0	True	AATAAA	-19	NA	123274484	123252428	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_-_123256172_123267272_123267387_123274216
H1_mix_00083765	chr8	-	2943	7	ISM	ENSG00000156802.13	ENST00000287394.10	5547	28	59378	0	20552	0	3prime_fragment	FALSE	canonical	3	203	junction_1	14.4299072146089	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTCTATTTCTTAAGT	2354	False	NA	0	True	AATAAA	-26	NA	123337069	123319849	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_-_123321176_123322937_123323067_123325892_123326027_123328189_123328580_123333877_123334022_123334199_123334323_123336372
H1_mix_00083766	chr8	-	5547	28	FSM	ENSG00000156802.13	ENST00000287394.10	5547	28	0	0	0	0	multi-exon	TRUE	canonical	3	161	junction_18	20.3469899493758	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTCTATTTCTTAAGT	-5	True	NA	0	True	AATAAA	-26	NA	123396447	123319849	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_123321176_123322937_123323067_123325892_123326027_123328189_123328580_123333877_123334022_123334199_123334323_123336372_123336533_123337624_123337822_123339310_123339447_123344883_123345070_123346085_123346273_123346617_123346751_123347091_123347407_123348182_123348274_123349284_123349445_123356388_123356478_123357561_123357737_123359220_123359337_123359576_123359686_123361538_123361647_123369057_123369176_123369820_123370025_123370902_123370991_123371235_123371339_123371669_123371836_123372636_123372687_123380528_123380678_123396186
H1_mix_00083768	chr8	-	9042	7	FSM	ENSG00000164983.8	ENST00000297632.8	9038	7	0	-4	0	4	multi-exon	FALSE	canonical	3	37	junction_4	3.67045259092421	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTTATTTTACTTTCTGC	-3	True	NA	-5	True	AATAAA	-24	NA	124372701	124306184	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_124314062_124320085_124320192_124322104_124322148_124323320_124323376_124327353_124327422_124330747_124330793_124371853
H1_mix_00083771	chr8	-	931	10	FSM	ENSG00000147687.19	ENST00000630259.1	915	10	0	-16	0	0	multi-exon	FALSE	canonical	3	13	junction_8	128.569431691332	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGGTACACACCATTCCCCA	-17	True	NA	NA	False	AATAAA	-38	NA	124539088	124488484	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_124488697_124493832_124493960_124495471_124495543_124504270_124504348_124508473_124508515_124508602_124508689_124515745_124515789_124515886_124516031_124522936_124523003_124539024
H1_mix_00083773	chr8	-	899	11	NIC	ENSG00000147687.19	novel	1029	12	NA	NA	4	-5	combination_of_known_junctions	FALSE	canonical	3	63	junction_9	137.107439623093	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATATAACAATACTATTAAA	5	True	NA	NA	False	AATACA	-2	NA	124539066	124488634	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_124488697_124493832_124493960_124495471_124495543_124504270_124504348_124508473_124508515_124508602_124508689_124515745_124515789_124515886_124516031_124518741_124518882_124522936_124523003_124539024
H1_mix_00083775	chr8	-	726	9	FSM	ENSG00000147687.19	ENST00000605953.5	726	9	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_7	46.3530945568902	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGTGTGTTTGCATTG	-11	True	NA	-30	True	ATTAAA	-1	NA	124539082	124504173	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_124504348_124508473_124508515_124508602_124508689_124515745_124515789_124515886_124516031_124518817_124518882_124522150_124522201_124522936_124523003_124539024
H1_mix_00083779	chr8	-	4994	14	FSM	ENSG00000170873.19	ENST00000518547.6	4994	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	8.58304369400823	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGTATTTCAAGTCTTG	-5	True	NA	-12	True	AATAAA	-20	NA	124728473	124550783	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_124553693_124555741_124555905_124556231_124556406_124557680_124557876_124562781_124562993_124565661_124565760_124567070_124567179_124568378_124568537_124585086_124585162_124589619_124589712_124591150_124591236_124699525_124699600_124704129_124704192_124727883
H1_mix_00083780	chr8	-	5152	13	NIC	ENSG00000170873.19	novel	4994	14	NA	NA	-353	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	7.02525207139692	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGTATTTCAAGTCTTG	121	False	NA	-12	True	AATAAA	-20	NA	124728826	124550783	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_124553693_124555741_124555905_124556231_124556406_124562781_124562993_124565661_124565760_124567070_124567179_124568378_124568537_124585086_124585162_124589619_124589712_124591150_124591236_124699525_124699600_124704129_124704192_124727883
H1_mix_00083781	chr8	-	718	3	FSM	ENSG00000170873.19	ENST00000472084.2	707	3	0	-11	0	11	multi-exon	FALSE	canonical	3	35	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATCTATTTATGCGTCCC	929	False	NA	NA	False	CATAAA	-37	NA	124728018	124699078	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_124699600_124704129_124704192_124727883
H1_mix_00083784	chr8	-	844	2	FSM	ENSG00000168672.4	ENST00000517458.1	844	2	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACTATCAACTGATTCAG	2053	False	NA	49	True	TTTAAA	-6	NA	126556419	126552814	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_126553504_126556264
H1_mix_00083785	chr8	-	243	2	Intergenic	novelGene_1501	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	292	junction_1	0	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCACAAGGTAATGTCAC	NA	False	NA	NA	False	NA	NA	NA	127437451	127431891	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_-_127432030_127437346
H1_mix_00083787	chr8	-	892	2	FSM	ENSG00000254275.6	ENST00000520824.1	892	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGAAAGGATGTGGGTCA	NA	False	NA	NA	False	NA	NA	NA	128561126	128559713	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_128560549_128561069
H1_mix_00083788	chr8	-	2097	2	Intergenic	novelGene_1506	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	0	312	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCCTCTTAGAACTTCT	NA	False	NA	NA	False	NA	NA	NA	128617471	128613593	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_-_128615251_128617031
H1_mix_00083789	chr8	-	1968	14	NNC	ENSG00000153310.20	novel	2196	15	NA	NA	0	10264	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	350.476277801758	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGAGATAGTGTCTTTTA	45	True	NA	NA	False	AAAAAG	-5	NA	129939746	129829328	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_129829374_129841468_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129879388_129879472_129903311_129903351_129904498_129904586_129939607
H1_mix_00083790	chr8	-	3801	12	FSM	ENSG00000153310.20	ENST00000519824.6	3798	12	0	-3	0	3	multi-exon	FALSE	canonical	3	554	junction_11	212.971538082106	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTCATTTGTTGACACAT	-41	True	NA	-6	True	AATAAA	-21	NA	129939832	129839589	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129879388_129879472_129903311_129903351_129939607
H1_mix_00083791	chr8	-	3716	12	NIC	ENSG00000153310.20	novel	2021	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	384	junction_11	293.338097882668	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCACTCATTTGTTGACA	45	True	NA	-9	True	AATAAA	-18	NA	129939746	129839592	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129903311_129903351_129904498_129904586_129939607
H1_mix_00083792	chr8	-	3656	11	NIC	ENSG00000153310.20	novel	3798	12	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	425	junction_9	249.174416824842	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTCATTTGTTGACACA	20	True	NA	-7	True	AATAAA	-20	NA	129939771	129839590	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129903311_129903351_129939607
H1_mix_00083793	chr8	-	1902	14	FSM	ENSG00000153310.20	ENST00000519110.5	1902	14	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_13	375.780702131808	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAT	NA	False	NA	-6	True	AATAAA	-22	NA	130016672	129841469	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129879388_129879472_129903311_129903351_129904498_129904586_129970942_129970996_130016606
H1_mix_00083794	chr8	-	1647	10	FSM	ENSG00000153310.20	ENST00000522250.5	1647	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_9	340.862558739761	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTTTCTAAGTGTGG	200	False	NA	-20	True	AATAAA	-8	NA	129939694	129841483	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129939607
H1_mix_00083795	chr8	-	1989	14	NIC	ENSG00000153310.20	novel	2196	15	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_10	394.724156548993	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTTTCTAAGTGTGG	150	False	NA	-20	True	AATAAA	-8	NA	129939744	129841483	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129879388_129879472_129880375_129880459_129903311_129903351_129904498_129904586_129939607
H1_mix_00083796	chr8	-	2034	13	FSM	ENSG00000153310.20	ENST00000519540.5	2021	13	0	-13	0	0	multi-exon	FALSE	canonical	3	384	junction_12	261.821451035285	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTTTCTAAGTGTGG	22	False	NA	-20	True	AATAAA	-8	NA	129939872	129841483	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129879388_129879472_129903311_129903351_129904498_129904586_129939607
H1_mix_00083797	chr8	-	1817	13	FSM	ENSG00000153310.20	ENST00000517654.5	1817	13	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_11	346.578514433118	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTTTCTAAGTGTGG	-5	True	NA	-20	True	AATAAA	-8	NA	130016451	129841483	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129879388_129879472_129903311_129903351_129970942_129970996_130016369
H1_mix_00083798	chr8	-	3797	14	NIC	ENSG00000153310.20	novel	2024	15	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	110	junction_12	350.52040769835	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTCATTTGTTGACACA	-5	True	NA	-7	True	AATAAA	-20	NA	130016451	129839590	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129879388_129879472_129903311_129903351_129904498_129904586_129970942_129970996_130016369
H1_mix_00083804	chr8	-	6072	29	NIC	ENSG00000153317.15	novel	6259	30	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	3	27	junction_5	20.1884931359931	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAAATCAGGCCATTTT	-22	True	NA	-13	True	AATAAA	-24	NA	130443657	130052102	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_130054806_130057953_130058077_130060578_130061070_130076347_130076407_130079901_130079972_130112093_130112323_130115627_130115736_130116677_130116746_130116879_130116996_130118160_130118247_130118488_130118676_130124012_130124105_130125955_130126090_130127926_130128091_130134295_130134345_130136950_130137039_130152735_130152806_130159863_130159965_130167535_130167623_130168991_130169068_130179263_130179350_130180750_130180881_130187235_130187286_130188108_130188184_130214555_130214702_130236921_130236995_130358016_130358144_130401884_130401971_130443459
H1_mix_00083808	chr8	-	5043	18	FSM	ENSG00000155897.10	ENST00000286355.10	4421	18	-631	9	-631	-9	multi-exon	FALSE	canonical	3	12	junction_7	9.24109971136729	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAACAAGGATGGTTTCG	-3	True	NA	NA	False	AATAAA	-28	NA	131041540	130780309	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_130780878_130783690_130783806_130785382_130785476_130800425_130800573_130814068_130814228_130821341_130821421_130836276_130836450_130847423_130847514_130849601_130849804_130867845_130867947_130884563_130884762_130903771_130904043_130909707_130909867_130937072_130937201_130943350_130943463_130951867_130951999_130990392_130990543_131039373
H1_mix_00083810	chr8	-	3320	12	FSM	ENSG00000129295.10	ENST00000620350.5	3343	12	0	23	0	-23	multi-exon	FALSE	canonical	0	0	junction_2	7.61577310586391	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTAAACAAACAAAACTGTG	3	True	NA	NA	False	AATAGA	-8	NA	132675545	132570438	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_132572481_132583693_132583780_132610165_132610262_132611293_132611364_132615037_132615098_132622610_132622689_132625271_132625455_132632739_132632964_132637934_132638108_132656829_132656908_132661459_132661628_132675483
H1_mix_00083811	chr8	-	3027	16	FSM	ENSG00000104419.17	ENST00000323851.13	3025	16	0	-2	0	2	multi-exon	TRUE	canonical	0	0	junction_9	1.92757763930679	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTGTGTCTTTTTTCTGT	0	True	NA	-3	True	AATAAA	-17	NA	133297252	133237172	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_133239120_133242022_133242075_133244354_133244391_133246615_133246664_133247874_133247927_133248714_133248772_133250439_133250544_133254538_133254596_133256776_133256864_133258365_133258427_133259167_133259231_133262046_133262168_133264546_133264653_133280231_133280268_133284248_133284330_133297133
H1_mix_00083813	chr8	-	895	2	FSM	ENSG00000008513.16	ENST00000523634.1	895	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTCGATGAGAGGTTCAA	12	True	NA	NA	False	NA	NA	NA	133489640	133475808	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_133476601_133489537
H1_mix_00083814	chr8	-	684	3	FSM	ENSG00000008513.16	ENST00000519924.5	684	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGAGACTGATCAAGCAC	14	True	NA	NA	False	NA	NA	NA	133489700	133475876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_133476075_133476277_133476601_133489537
H1_mix_00083815	chr8	-	4594	16	FSM	ENSG00000066827.16	ENST00000377838.8	4594	16	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	3.02875111776015	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGGTTCTTCAGGCGG	-4	True	NA	-3	True	AATAAA	-18	NA	134713031	134477787	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_134478722_134509618_134509750_134512474_134512602_134520882_134521002_134532833_134532973_134565332_134565422_134583831_134584006_134588245_134588396_134590267_134590356_134600435_134600669_134601476_134602934_134608728_134608880_134610469_134610656_134637460_134637713_134657560_134657738_134712844
H1_mix_00083816	chr8	-	203	1	FSM	ENSG00000253915.1	ENST00000522077.1	797	1	701	-107	701	107	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCAAAAAGTGCCTCTTG	NA	False	NA	NA	False	NA	NA	NA	135625280	135625077	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_135625100_135625300
H1_mix_00083817	chr8	-	8713	4	Intergenic	novelGene_1510	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	35	junction_1	42.4604391038163	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGAGTTGAAAATATCTG	NA	False	NA	-14	True	AATAAA	-15	NA	137413588	137314378	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_-_137322764_137384218_137384249_137384632_137384678_137413335
H1_mix_00083819	chr8	-	6637	23	FSM	ENSG00000167632.18	ENST00000438773.4	6899	23	0	262	0	-262	multi-exon	FALSE	canonical	0	0	junction_3	19.8471431422533	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTAGCCTTCCCATTGC	-1	True	NA	84	True	AATAAA	-13	NA	140457744	139727986	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_139731229_139731978_139732203_139885878_139885970_139910146_139910301_139988725_139988837_140023936_140024080_140221458_140221584_140252776_140252930_140275657_140275822_140283888_140284022_140287607_140287735_140290992_140291079_140300468_140300615_140311247_140311375_140360049_140360194_140370963_140371181_140397619_140397746_140405576_140405699_140426614_140426642_140435111_140435241_140439051_140439198_140450789_140451384_140457638
H1_mix_00083820	chr8	-	4248	22	NIC	ENSG00000167632.18	novel	6899	23	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	17.1023330548311	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGCCTCCCTGCATCTG	3	True	NA	-16	True	AATAAA	-16	NA	140457740	139730344	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_139731229_139731978_139732203_139885878_139885970_139910146_139910301_139988725_139988837_140023936_140024080_140221458_140221584_140252776_140252930_140275657_140275822_140283888_140284022_140287607_140287735_140290992_140291079_140300468_140300615_140311247_140311375_140360049_140360194_140370963_140371181_140397619_140397746_140405576_140405699_140435111_140435241_140439051_140439198_140450789_140451384_140457638
H1_mix_00083822	chr8	-	14685	19	FSM	ENSG00000123908.12	ENST00000220592.10	14595	19	0	-90	0	90	multi-exon	FALSE	canonical	3	55	junction_10	11.9747677108324	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGCCTTCAGGGATGGAAG	6	True	NA	78	True	NA	NA	NA	140635633	140520065	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_140532153_140532415_140532616_140535467_140535570_140539319_140539455_140541163_140541359_140544212_140544304_140547467_140547628_140549113_140549299_140551302_140551437_140555895_140556019_140556166_140556287_140557088_140557237_140558484_140558573_140559394_140559530_140560373_140560511_140562452_140562635_140572811_140572933_140585118_140585312_140635484
H1_mix_00083823	chr8	-	3141	18	FSM	ENSG00000123908.12	ENST00000519980.5	3141	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	22.8680584415427	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCCCGTGTGTTTACAGC	93	False	NA	-116	True	NA	NA	NA	140635546	140531420	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_140532153_140532415_140532616_140539319_140539455_140541163_140541359_140544212_140544304_140547467_140547628_140549113_140549299_140551302_140551437_140555895_140556019_140556166_140556287_140557088_140557237_140558484_140558573_140559394_140559530_140560373_140560511_140562452_140562635_140572811_140572933_140585118_140585312_140635484
H1_mix_00083825	chr8	-	422	4	FSM	ENSG00000123908.12	ENST00000517293.5	422	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	32.273139846559	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACAAAGTACACATGCTAA	93	False	NA	NA	False	NA	NA	NA	140635546	140572557	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_140572604_140572811_140572933_140585118_140585312_140635484
H1_mix_00083826	chr8	-	3905	3	FSM	ENSG00000169398.19	ENST00000517712.5	3351	3	-194	-360	-194	-145	multi-exon	FALSE	canonical	3	561	junction_2	14	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCTAGTCTTGCTAGAAT	NA	False	NA	NA	False	NA	NA	NA	140670458	140658044	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_140659679_140664916_140664998_140668268
H1_mix_00083827	chr8	-	4453	30	NIC	ENSG00000169398.19	novel	4388	33	NA	NA	0	-145	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	133.648090627657	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCTAGTCTTGCTAGAAT	NA	False	NA	NA	False	NA	NA	NA	140890768	140658044	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_140659679_140664916_140664998_140668268_140668425_140669726_140669736_140674297_140674405_140675459_140675500_140686631_140686695_140700890_140701023_140702569_140702708_140706118_140706206_140717597_140717710_140735250_140735456_140739017_140739108_140743229_140743331_140744651_140744768_140746759_140746861_140752231_140752317_140761164_140761263_140764233_140764291_140789473_140789527_140793353_140793385_140800458_140800577_140803542_140803651_140818276_140818355_140818879_140819021_140830471_140830527_140846259_140846323_140846598_140846679_140864311_140864400_140890542
H1_mix_00083828	chr8	-	4810	32	FSM	ENSG00000169398.19	ENST00000522684.5	4955	32	0	145	0	-145	multi-exon	FALSE	canonical	3	170	junction_31	82.777022052093	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCTAGTCTTGCTAGAAT	26	True	NA	NA	False	NA	NA	NA	141001233	140658044	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_140659679_140664916_140664998_140668268_140668425_140674297_140674405_140675459_140675500_140686631_140686695_140700890_140701023_140702569_140702708_140706118_140706206_140717597_140717710_140735250_140735456_140739017_140739108_140743229_140743331_140744651_140744768_140746759_140746861_140752231_140752317_140761164_140761263_140764233_140764291_140789473_140789527_140793353_140793385_140800458_140800577_140803542_140803651_140818276_140818355_140818879_140819021_140830471_140830527_140846259_140846323_140846598_140846679_140864311_140864400_140879470_140879638_140890542_140890770_140925660_140925750_141001124
H1_mix_00083829	chr8	-	4870	33	NIC	ENSG00000169398.19	novel	4414	33	NA	NA	0	-145	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	130.232810615979	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCTAGTCTTGCTAGAAT	-25	True	NA	NA	False	NA	NA	NA	141001284	140658044	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_140659679_140664916_140664998_140668268_140668425_140669726_140669736_140674297_140674405_140675459_140675500_140686631_140686695_140700890_140701023_140702569_140702708_140706118_140706206_140717597_140717710_140735250_140735456_140739017_140739108_140743229_140743331_140744651_140744768_140746759_140746861_140752231_140752317_140761164_140761263_140764233_140764291_140789473_140789527_140793353_140793385_140800458_140800577_140803542_140803651_140818276_140818355_140818879_140819021_140830471_140830527_140846259_140846323_140846598_140846679_140864311_140864400_140879470_140879638_140890542_140890770_140925660_140925750_141001124
H1_mix_00083832	chr8	-	4437	33	FSM	ENSG00000169398.19	ENST00000340930.7	4414	33	0	-23	0	0	multi-exon	FALSE	canonical	0	0	junction_4	149.49811871726	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGGTTCTGTTTCTTC	9	True	NA	0	True	ATTAAA	-38	NA	141001158	140658381	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_140659679_140664916_140664998_140668268_140668425_140669726_140669736_140674297_140674405_140675429_140675500_140686631_140686695_140700890_140701023_140702569_140702708_140706118_140706206_140717597_140717710_140735250_140735456_140739017_140739108_140743229_140743331_140744651_140744768_140746759_140746861_140752231_140752317_140761164_140761263_140764233_140764291_140789473_140789527_140793353_140793385_140800458_140800577_140803542_140803651_140818276_140818355_140818879_140819021_140830471_140830527_140846259_140846323_140846598_140846679_140864311_140864400_140879470_140879638_140890542_140890770_140925660_140925750_141001124
H1_mix_00083833	chr8	-	4415	31	FSM	ENSG00000169398.19	ENST00000395218.3	4415	31	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_7	113.549793287155	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGGTTCTGTTTCTTC	-1	True	NA	0	True	ATTAAA	-38	NA	141001313	140658381	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_140659679_140664916_140664998_140668268_140668425_140674297_140674405_140675459_140675500_140686631_140686695_140700890_140701023_140706118_140706206_140717597_140717710_140735250_140735456_140739017_140739108_140743229_140743331_140744651_140744768_140746759_140746861_140752231_140752317_140761164_140761263_140764233_140764291_140789473_140789527_140793353_140793385_140800458_140800577_140803542_140803651_140818276_140818355_140818879_140819021_140830471_140830527_140846259_140846323_140846598_140846679_140864311_140864400_140879470_140879638_140890542_140890770_140925660_140925750_141001124
H1_mix_00083834	chr8	-	4206	30	NIC	ENSG00000169398.19	novel	4955	32	NA	NA	7	3	combination_of_known_junctions	FALSE	canonical	3	127	junction_28	88.2652741495185	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTCTTTTGGTTCTGTTT	33	True	NA	-4	True	ATTAAA	-34	NA	141001226	140658385	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_140659679_140664916_140664998_140668268_140668425_140674297_140674405_140675459_140675500_140686631_140686695_140700890_140701023_140702569_140702708_140706118_140706206_140717597_140717710_140735250_140735456_140739017_140739108_140743229_140743331_140744651_140744768_140746759_140746861_140752231_140752317_140761164_140761263_140764233_140764291_140789473_140789527_140793353_140793385_140800458_140800577_140803542_140803651_140818276_140818355_140818879_140819021_140830471_140830527_140846259_140846323_140846598_140846679_140864311_140864400_140890542_140890770_141001124
H1_mix_00083835	chr8	-	4784	33	NIC	ENSG00000169398.19	novel	4955	32	NA	NA	5	-3	combination_of_known_junctions	FALSE	canonical	3	6	junction_31	129.264687269958	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTTTGGTTCTGTTTC	31	True	NA	-3	True	ATTAAA	-35	NA	141001228	140658384	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_140659679_140664916_140664998_140668268_140668425_140674297_140674405_140675459_140675500_140686631_140686695_140700890_140701023_140702569_140702708_140706118_140706206_140717597_140717710_140735250_140735456_140739017_140739108_140743229_140743331_140744651_140744768_140746759_140746861_140752231_140752317_140761164_140761263_140764233_140764291_140789473_140789527_140793353_140793385_140800458_140800577_140803542_140803651_140818276_140818355_140818879_140819021_140830471_140830527_140846259_140846323_140846598_140846679_140864311_140864400_140879470_140879638_140890542_140890770_140920813_140921133_140925660_140925750_141001124
H1_mix_00083836	chr8	-	4106	29	NIC	ENSG00000169398.19	novel	4955	32	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	3	29	junction_21	120.804720984922	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTTTGGTTCTGTTTC	26	True	NA	-3	True	ATTAAA	-35	NA	141001233	140658384	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_140659679_140664916_140664998_140668268_140668425_140674297_140674405_140675459_140675500_140686631_140686695_140700890_140701023_140702569_140702708_140706118_140706206_140717597_140717710_140735250_140735456_140739017_140739108_140743229_140743331_140744651_140744768_140746759_140746861_140752231_140752317_140761164_140761263_140764233_140764291_140789473_140789527_140793353_140793385_140800458_140800577_140818276_140818355_140818879_140819021_140830471_140830527_140846259_140846323_140846598_140846679_140864311_140864400_140890542_140890770_141001124
H1_mix_00083837	chr8	-	4414	31	NIC	ENSG00000169398.19	novel	4955	32	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	237	junction_30	63.1744410343297	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTTTGGTTCTGTTTC	-7	True	NA	-3	True	ATTAAA	-35	NA	141001266	140658384	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_140659679_140664916_140664998_140668268_140668425_140674297_140674405_140675459_140675500_140686631_140686695_140700890_140701023_140702569_140702708_140706118_140706206_140717597_140717710_140735250_140735456_140739017_140739108_140743229_140743331_140744651_140744768_140746759_140746861_140752231_140752317_140761164_140761263_140764233_140764291_140789473_140789527_140793353_140793385_140800458_140800577_140803542_140803651_140818276_140818355_140818879_140819021_140830471_140830527_140846259_140846323_140846598_140846679_140864311_140864400_140879470_140879638_140890542_140890770_141001124
H1_mix_00083844	chr8	-	901	4	ISM	ENSG00000169398.19	ENST00000340930.7	4414	33	-75	220757	0	0	5prime_fragment	FALSE	canonical	3	170	junction_3	95.5091618641898	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGTGTGTATGTATA	26	True	NA	-1	True	AATAAA	-17	NA	141001233	140879161	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_-_140879638_140890542_140890770_140925660_140925750_141001124
H1_mix_00083849	chr8	-	4529	8	NIC	ENSG00000022567.10	novel	7418	9	NA	NA	-22	0	intron_retention	FALSE	canonical	1	3	junction_1	8.64728340024089	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACGACTGTTTAATGTAC	-5	True	NA	-2	True	AATAAA	-27	NA	141308327	141210600	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_141212557_141215758_141215971_141217089_141217190_141218010_141219030_141219649_141219830_141221576_141221766_141253988_141254630_141308095
H1_mix_00083851	chr8	-	4246	13	NNC	ENSG00000171045.16	novel	2110	11	NA	NA	0	1020	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_12	15.8893745069535	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGTGTGTGTTTTCTGT	270	False	NA	0	True	AATAAA	-36	NA	142402888	142269454	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_142271692_142279859_142280325_142284412_142284486_142300485_142300645_142314383_142314441_142315002_142315093_142318543_142318635_142330900_142330971_142331753_142331832_142343965_142344473_142345742_142345893_142354636_142354764_142402746
H1_mix_00083854	chr8	-	2951	3	FSM	ENSG00000198576.4	ENST00000356613.4	2950	3	0	-1	0	1	multi-exon	FALSE	canonical	3	30	junction_1	1.5	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTGTTCATGTTGTTTC	-3	True	NA	-9	True	AATAAA	-15	NA	142614479	142611047	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_142611858_142612107_142612253_142612483
H1_mix_00083856	chr8	-	2679	3	FSM	ENSG00000234616.9	ENST00000571961.7	2687	3	8	0	2	0	multi-exon	FALSE	canonical	2	5	junction_1	6	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAGAAAGCCTTCAGCC	-17	True	NA	NA	False	AATAAA	-20	NA	142669986	142658363	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_142658945_142664477_142666521_142669931
H1_mix_00083860	chr8	-	995	2	FSM	ENSG00000247317.4	ENST00000517833.2	1036	2	41	0	7	0	multi-exon	FALSE	canonical	2	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAATAAAGGTGAAATAAAT	31	True	NA	NA	False	NA	NA	NA	143018390	142981737	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_142982502_143018159
H1_mix_00083861	chr8	-	903	4	FSM	ENSG00000176956.13	ENST00000342752.9	942	4	0	39	0	-39	multi-exon	FALSE	canonical	1	2	junction_3	2.82842712474619	409	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTCTTCTGCGGAGAAATAA	-32	True	NA	NA	False	NA	NA	NA	143160321	143157954	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143158486_143158802_143158923_143159581_143159710_143160197
H1_mix_00083866	chr8	-	510	4	FSM	ENSG00000184428.13	ENST00000519977.5	892	4	0	382	0	-382	multi-exon	FALSE	canonical	1	1	junction_1	160.011110725335	3617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCCCAGGGAGGCCAGGA	8190	False	NA	NA	False	NA	NA	NA	143315807	143304765	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143304916_143309414_143309544_143310067_143310218_143315726
H1_mix_00083868	chr8	-	1942	14	FSM	ENSG00000184428.13	ENST00000329245.9	1942	14	0	0	0	0	multi-exon	TRUE	canonical	3	279	junction_9	23.4008041130234	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCCAGGCCGGCCGGGCA	-11	True	NA	5	True	AATAAA	-34	NA	143334880	143309323	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143309544_143310067_143310218_143315726_143315822_143315998_143316127_143317722_143317838_143318017_143318087_143321200_143321387_143323998_143324143_143324484_143324630_143325345_143325534_143326221_143326345_143329349_143329472_143331223_143331340_143334739
H1_mix_00083869	chr8	-	2003	15	FSM	ENSG00000184428.13	ENST00000523676.5	1982	15	0	-21	0	0	multi-exon	FALSE	canonical	3	23	junction_13	103.936622172223	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGCAAGTGCTTGTACA	600	False	NA	-27	True	AATAAA	-2	NA	143334795	143309355	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143309544_143310067_143310218_143315726_143315822_143315998_143316127_143317722_143317838_143318017_143318087_143321200_143321387_143323998_143324143_143324484_143324630_143325345_143325534_143326221_143326345_143329349_143329472_143331223_143331340_143334107_143334286_143334739
H1_mix_00083872	chr8	-	3719	15	Fusion	ENSG00000014164.7_ENSG00000254859.1	novel	3270	12	NA	NA	33	0	multi-exon	TRUE	canonical	1	1	junction_12	123.320492528821	39	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTGGCTTGTCCTGACT	8575	False	NA	-5	True	AATAAA	-15	NA	143549696	143437658	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr8_-_143438088_143440040_143440364_143440935_143441121_143465716_143465849_143468208_143468279_143468381_143468541_143468616_143468660_143475397_143475586_143507745_143507900_143536256_143536454_143538002_143539321_143541375_143541514_143541912_143541971_143542108_143542393_143549655
H1_mix_00083874	chr8	-	454	2	FSM	ENSG00000147813.16	ENST00000529179.1	454	2	0	0	0	0	multi-exon	FALSE	canonical	3	424	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTCCTGTGTTGTTTGT	5991	False	NA	-4	True	GGGGCT	-38	NA	143575323	143574784	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143574901_143574985
H1_mix_00083875	chr8	-	1682	13	FSM	ENSG00000147813.16	ENST00000449291.7	1682	13	0	0	0	0	multi-exon	TRUE	canonical	3	306	junction_8	44.1981020205871	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTCCTGTGTTGTTTGT	3	True	NA	-4	True	GGGGCT	-38	NA	143578330	143574784	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143574901_143574985_143575094_143575190_143575346_143575422_143575526_143575621_143575703_143576077_143576163_143576431_143576573_143576645_143576843_143577061_143577178_143577268_143577400_143577656_143577740_143577815_143577944_143578092
H1_mix_00083876	chr8	-	1877	11	FSM	ENSG00000147813.16	ENST00000435154.7	1877	11	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_6	46.0656053905731	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTCCTGTGTTGTTTGT	-10	True	NA	-4	True	GGGGCT	-38	NA	143578343	143574784	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143575346_143575422_143575526_143575621_143575703_143576077_143576163_143576431_143576573_143576645_143576843_143577061_143577178_143577268_143577400_143577656_143577740_143577815_143577944_143578092
H1_mix_00083877	chr8	-	1654	13	FSM	ENSG00000147813.16	ENST00000426292.7	1654	13	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	111.370876903355	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTTGTCCTGTGTTGTTT	-10	True	NA	-6	True	GGGGCT	-36	NA	143578343	143574786	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143574901_143574985_143575094_143575229_143575346_143575422_143575526_143575621_143575703_143576077_143576163_143576431_143576573_143576645_143576843_143577061_143577178_143577268_143577400_143577656_143577740_143577815_143577944_143578092
H1_mix_00083879	chr8	-	1461	8	FSM	ENSG00000104529.19	ENST00000317198.10	1458	8	0	-3	0	3	multi-exon	FALSE	canonical	3	92	junction_7	1129.84331584842	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCCTGTCTCCCTCCCT	287	False	NA	0	True	NA	NA	NA	143597388	143579693	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586853_143596878
H1_mix_00083880	chr8	-	424	3	FSM	ENSG00000104529.19	ENST00000529576.5	424	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	1771	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	9306	False	NA	-34	True	ATTAAA	-14	NA	143580637	143579727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143579825_143580011_143580207_143580505
H1_mix_00083881	chr8	-	3718	4	FSM	ENSG00000104529.19	ENST00000527741.5	3718	4	0	0	0	0	multi-exon	FALSE	canonical	3	3338	junction_3	93.5568751556447	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	7871	False	NA	-34	True	ATTAAA	-14	NA	143584251	143579727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053
H1_mix_00083882	chr8	-	1629	7	FSM	ENSG00000104529.19	ENST00000530445.6	1621	7	0	-8	0	0	multi-exon	FALSE	canonical	3	2617	junction_5	377.620032425306	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	9875	False	NA	-34	True	ATTAAA	-14	NA	143587564	143579727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586218_143586291_143586728
H1_mix_00083883	chr8	-	2387	8	FSM	ENSG00000104529.19	ENST00000532741.5	2387	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_7	1149.16017249155	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	7215	False	NA	-34	True	ATTAAA	-14	NA	143590460	143579727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586853_143588990
H1_mix_00083884	chr8	-	862	8	FSM	ENSG00000104529.19	ENST00000529007.5	861	8	0	-1	0	0	multi-exon	FALSE	canonical	3	62	junction_3	1112.17874059002	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	288	False	NA	-34	True	ATTAAA	-14	NA	143597387	143579727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143579831_143580011_143580207_143580505_143580633_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586853_143597347
H1_mix_00083885	chr8	-	894	7	FSM	ENSG00000104529.19	ENST00000534377.6	886	7	0	-8	0	0	multi-exon	FALSE	canonical	3	535	junction_6	1362.60799775855	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	276	False	NA	-34	True	ATTAAA	-14	NA	143597399	143579727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586728_143586850_143597347
H1_mix_00083886	chr8	-	841	7	FSM	ENSG00000104529.19	ENST00000531621.5	840	7	0	-1	0	0	multi-exon	FALSE	canonical	3	162	junction_4	1412.9110218112	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	275	False	NA	-34	True	ATTAAA	-14	NA	143597400	143579727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581285_143581329_143586728_143586853_143597347
H1_mix_00083887	chr8	-	926	8	FSM	ENSG00000104529.19	ENST00000526838.5	926	8	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_4	1084.59969103625	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	1	True	NA	-34	True	ATTAAA	-14	NA	143597413	143579727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581285_143581329_143586218_143586291_143586728_143586853_143597347
H1_mix_00083888	chr8	-	923	7	FSM	ENSG00000104529.19	ENST00000528610.5	923	7	0	0	0	0	multi-exon	FALSE	canonical	3	539	junction_5	1057.35356222768	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	250	False	NA	-34	True	ATTAAA	-14	NA	143597425	143579727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586728_143586853_143597347
H1_mix_00083890	chr8	-	1249	8	FSM	ENSG00000104529.19	ENST00000395119.7	1249	8	0	0	0	0	multi-exon	FALSE	canonical	3	2617	junction_5	381.355263153262	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	-4	True	NA	-34	True	ATTAAA	-14	NA	143597679	143579727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586853_143597347
H1_mix_00083891	chr8	-	1311	8	FSM	ENSG00000104529.19	ENST00000529272.5	1311	8	0	0	0	0	multi-exon	FALSE	canonical	3	535	junction_7	983.603869161042	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	NA	False	NA	-34	True	ATTAAA	-14	NA	143597744	143579727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586850_143597347
H1_mix_00083895	chr8	-	830	3	FSM	ENSG00000104524.14	ENST00000482616.1	830	3	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_2	12	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGAGTATTGCCTCGTCCA	8	True	NA	NA	False	NA	NA	NA	143609557	143606467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143607133_143608061_143608127_143609457
H1_mix_00083896	chr8	-	1325	11	FSM	ENSG00000104522.16	ENST00000529064.5	1324	11	0	-1	0	1	multi-exon	FALSE	canonical	3	86	junction_10	218.131244896278	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTTGGCAGCTCTGTGC	-10	True	NA	-4	True	AATAAA	-18	NA	143617482	143612616	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143612966_143613195_143613296_143613523_143613604_143613750_143613818_143614163_143614229_143614319_143614454_143614623_143614698_143614786_143614916_143616105_143616221_143616566_143616724_143617427
H1_mix_00083897	chr8	-	2221	9	FSM	ENSG00000104522.16	ENST00000531473.5	2220	9	0	-1	0	1	multi-exon	FALSE	canonical	3	722	junction_3	34.6482322781408	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTTGGCAGCTCTGTGC	28	True	NA	-4	True	AATAAA	-18	NA	143617504	143612616	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143612966_143613195_143613296_143613523_143613604_143613750_143613818_143614163_143614229_143614319_143614698_143614786_143614916_143616105_143616221_143616566
H1_mix_00083898	chr8	-	1346	11	FSM	ENSG00000104522.16	ENST00000425753.7	1345	11	0	-1	0	1	multi-exon	FALSE	canonical	3	559	junction_10	80.4537755484477	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTTGGCAGCTCTGTGC	-17	True	NA	-4	True	AATAAA	-18	NA	143617549	143612616	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143612966_143613195_143613296_143613523_143613604_143613750_143613818_143614163_143614229_143614319_143614454_143614623_143614698_143614786_143614916_143616105_143616221_143616566_143616724_143617473
H1_mix_00083904	chr8	-	8680	4	ISM	ENSG00000180921.7	ENST00000388913.4	5632	5	45	0	45	0	intron_retention	TRUE	canonical	1	1	junction_2	2.35702260395516	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGCATGTTCCCCAGTG	-1	True	NA	-12	True	AATAAA	-18	NA	143733734	143723932	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_-_143728724_143728966_143729092_143729158_143729324_143730135
H1_mix_00083905	chr8	-	5665	36	FSM	ENSG00000180900.20	ENST00000320476.7	5143	36	-394	-128	0	128	multi-exon	TRUE	canonical	3	205	junction_25	65.2300544227889	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGGGCAGGCTGCCCATC	7593	False	143815786	NA	False	NA	NA	NA	143815773	143790791	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143791309_143791388_143791441_143791875_143791914_143791990_143792134_143792219_143792406_143792484_143792636_143792707_143792868_143792975_143793084_143793899_143793963_143795037_143795113_143795276_143795334_143795419_143795531_143803382_143803572_143803646_143803941_143804045_143804157_143804567_143804826_143804933_143805015_143805111_143805436_143806406_143806485_143806923_143807014_143807551_143807615_143808608_143809026_143809550_143809719_143810478_143810605_143810685_143810817_143810905_143811073_143811145_143811346_143812265_143812385_143812816_143812962_143813029_143813105_143813310_143813375_143813469_143813527_143813636_143813727_143813817_143813897_143814000_143814119_143815213
H1_mix_00083906	chr8	-	5630	35	NIC	ENSG00000180900.20	novel	5607	37	NA	NA	-28	128	combination_of_known_junctions	FALSE	canonical	3	37	junction_20	76.9556336480508	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGGGCAGGCTGCCCATC	7565	False	NA	NA	False	NA	NA	NA	143815801	143790791	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_143791309_143791388_143791441_143791875_143791914_143791990_143792134_143792219_143792406_143792484_143792636_143792707_143792868_143792975_143793084_143793899_143793963_143795037_143795113_143795276_143795334_143795419_143795531_143803382_143803572_143803646_143803941_143804045_143804157_143804567_143804826_143804933_143805015_143805111_143805436_143806406_143806485_143806923_143807014_143808608_143809026_143809550_143809719_143810478_143810605_143810685_143810817_143810905_143811073_143811145_143811346_143812265_143812385_143812816_143812962_143813029_143813105_143813310_143813375_143813469_143813527_143813636_143813727_143813817_143813897_143814000_143814119_143815213
H1_mix_00083907	chr8	-	3102	22	NIC	ENSG00000180900.20	novel	5607	37	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_21	104.061141106733	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGCCTGTCCATCCCCC	7109	False	NA	-1	True	AATAAA	-21	NA	143808677	143790919	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_143791309_143791388_143791441_143791665_143791741_143791875_143791914_143791990_143792134_143792219_143792406_143792484_143792636_143792707_143792868_143792975_143793084_143793899_143793963_143795037_143795113_143795276_143795334_143795419_143795531_143803382_143803572_143803646_143803941_143804045_143804157_143804567_143804826_143804933_143805015_143805111_143805436_143806406_143806485_143806923_143807014_143808608
H1_mix_00083908	chr8	-	5227	37	FSM	ENSG00000180900.20	ENST00000674084.1	5227	37	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	90.9557279364222	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGCCTGTCCATCCCCC	7987	False	NA	-1	True	AATAAA	-21	NA	143815379	143790919	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143791309_143791388_143791441_143791875_143791914_143791990_143792134_143792219_143792406_143792484_143792636_143792707_143792868_143792975_143793084_143793256_143793341_143793899_143793963_143795037_143795113_143795276_143795334_143795419_143795531_143803382_143803572_143803646_143803941_143804045_143804157_143804567_143804826_143804933_143805015_143805111_143805436_143806406_143806485_143806923_143807014_143807551_143807615_143808608_143809026_143809550_143809719_143810478_143810605_143810685_143810817_143810905_143811073_143811145_143811346_143812265_143812385_143812816_143812962_143813029_143813105_143813310_143813375_143813469_143813527_143813636_143813727_143813817_143813897_143814000_143814119_143815213
H1_mix_00083909	chr8	-	5612	37	FSM	ENSG00000180900.20	ENST00000356994.7	5607	37	0	-5	0	0	multi-exon	FALSE	canonical	3	99	junction_2	77.0820270159581	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGCCTGTCCATCCCCC	7593	False	143815786	-1	True	AATAAA	-21	NA	143815773	143790919	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143791309_143791388_143791441_143791665_143791741_143791875_143791914_143791990_143792134_143792219_143792406_143792484_143792636_143792707_143792868_143792975_143793084_143793899_143793963_143795037_143795113_143795276_143795334_143795419_143795531_143803382_143803572_143803646_143803941_143804045_143804157_143804567_143804826_143804933_143805015_143805111_143805436_143806406_143806485_143806923_143807014_143807551_143807615_143808608_143809026_143809550_143809719_143810478_143810605_143810685_143810817_143810905_143811073_143811145_143811346_143812265_143812385_143812816_143812962_143813029_143813105_143813310_143813375_143813469_143813527_143813636_143813727_143813817_143813897_143814000_143814119_143815213
H1_mix_00083911	chr8	-	1859	12	FSM	ENSG00000179950.14	ENST00000453551.6	1842	12	0	-17	0	-16	multi-exon	FALSE	canonical	3	73	junction_11	597.939492226125	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGTCCTGTCACCGATCCT	3	True	NA	-14	True	GATAAA	-42	NA	143829026	143816359	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143820665_143820717_143821596_143821687_143821817_143821914_143824312_143824400_143828983
H1_mix_00083912	chr8	-	1821	11	FSM	ENSG00000179950.14	ENST00000313352.11	1804	11	0	-17	0	-16	multi-exon	FALSE	canonical	3	73	junction_10	566.651074295285	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGTCCTGTCACCGATCCT	-10	True	NA	-14	True	GATAAA	-42	NA	143829039	143816359	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143821596_143821687_143821817_143821914_143824312_143824400_143828983
H1_mix_00083913	chr8	-	1753	11	FSM	ENSG00000179950.14	ENST00000456095.6	1736	11	0	-17	0	-16	multi-exon	FALSE	canonical	3	189	junction_10	599.854282305295	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGTCCTGTCACCGATCCT	7074	False	NA	-14	True	GATAAA	-42	NA	143829303	143816359	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143820665_143820717_143821596_143821687_143821817_143821914_143829279
H1_mix_00083914	chr8	-	1868	12	FSM	ENSG00000179950.14	ENST00000526683.6	1868	12	0	0	0	0	multi-exon	FALSE	canonical	3	692	junction_7	445.979060398635	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGGCGTGTGTCCTTAG	11	True	NA	2	True	NA	NA	NA	143829315	143816343	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143820665_143820717_143821596_143821687_143821817_143821914_143824312_143824400_143829279
H1_mix_00083915	chr8	-	1838	11	FSM	ENSG00000179950.14	ENST00000349157.10	1821	11	0	-17	0	-16	multi-exon	FALSE	canonical	3	944	junction_7	360.966258810986	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGTCCTGTCACCGATCCT	7025	False	NA	-14	True	GATAAA	-42	NA	143829352	143816359	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143821596_143821687_143821817_143821914_143824312_143824400_143829279
H1_mix_00083916	chr8	-	989	8	FSM	ENSG00000179950.14	ENST00000526459.5	1003	8	0	14	0	-6	multi-exon	FALSE	canonical	3	220	junction_7	536.707650439992	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGGCCCACACAGCTGT	-12	True	NA	NA	False	NA	NA	NA	143829338	143817591	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143821596_143821687_143821817_143821914_143824312_143824397_143829279
H1_mix_00083923	chr8	-	3710	13	FSM	ENSG00000185189.18	ENST00000529747.5	3693	13	0	-17	0	0	multi-exon	FALSE	canonical	3	51	junction_1	5.13903903684553	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAACTCTCTTAACTGTTT	1049	False	NA	NA	False	AATAAA	-37	NA	143840029	143833582	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143835876_143835966_143836031_143836126_143836181_143837038_143837175_143837248_143837300_143837406_143837510_143837622_143837756_143838679_143838776_143838882_143838939_143839016_143839101_143839171_143839196_143839313_143839409_143839508
H1_mix_00083924	chr8	-	3888	17	FSM	ENSG00000185189.18	ENST00000533093.5	3877	17	0	-11	0	0	multi-exon	FALSE	canonical	3	33	junction_1	8.99457301654726	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAACTCTCTTAACTGTTT	17	True	NA	NA	False	AATAAA	-37	NA	143840951	143833582	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143835731_143835819_143835876_143835966_143836031_143836126_143836181_143837038_143837175_143837248_143837300_143837406_143837510_143837622_143837756_143838679_143838776_143838882_143838939_143839016_143839101_143839171_143839196_143839313_143839409_143839508_143839826_143839928_143840031_143840106_143840230_143840705
H1_mix_00083927	chr8	-	14802	32	FSM	ENSG00000178209.17	ENST00000345136.8	14804	32	0	2	0	-2	multi-exon	FALSE	canonical	1	1	junction_31	19.6907411277547	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCGTGCCTCCGGCCTTG	-17	True	NA	-9	True	AATAAA	-14	NA	143939597	143915154	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143922396_143922503_143925885_143926783_143926883_143926976_143927082_143927251_143927336_143927409_143927767_143927853_143927993_143929102_143929282_143929413_143929572_143929645_143929830_143929935_143930063_143930143_143930299_143930383_143930537_143931533_143931660_143931936_143932033_143932129_143932235_143932399_143932562_143932634_143932713_143932792_143933112_143933196_143933352_143933997_143934092_143934317_143934446_143934634_143934731_143934809_143934930_143935010_143935118_143935197_143935314_143935847_143936015_143936978_143937072_143937164_143937243_143938150_143938241_143938630_143938693_143939349
H1_mix_00083928	chr8	-	15247	32	FSM	ENSG00000178209.17	ENST00000322810.8	15249	32	0	2	0	-2	multi-exon	FALSE	canonical	1	1	junction_31	19.6907411277547	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCGTGCCTCCGGCCTTG	8650	False	NA	-9	True	AATAAA	-14	NA	143950876	143915154	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143922396_143922503_143925885_143926783_143926883_143926976_143927082_143927251_143927336_143927409_143927767_143927853_143927993_143929102_143929282_143929413_143929572_143929645_143929830_143929935_143930063_143930143_143930299_143930383_143930537_143931533_143931660_143931936_143932033_143932129_143932235_143932399_143932562_143932634_143932713_143932792_143933112_143933196_143933352_143933997_143934092_143934317_143934446_143934634_143934731_143934809_143934930_143935010_143935118_143935197_143935314_143935847_143936015_143936978_143937072_143937164_143937243_143938150_143938241_143938630_143938693_143950183
H1_mix_00083929	chr8	-	15317	33	NNC	ENSG00000178209.17	novel	15249	32	NA	NA	-39	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	24.0090315037904	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCGTGCCTCCGGCCTTG	5	True	NA	-9	True	AATAAA	-14	NA	143950915	143915154	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_143922396_143922503_143925885_143926086_143926118_143926783_143926883_143926976_143927082_143927251_143927336_143927409_143927767_143927853_143927993_143929102_143929282_143929413_143929572_143929645_143929830_143929935_143930063_143930143_143930299_143930383_143930537_143931533_143931660_143931936_143932033_143932129_143932235_143932399_143932562_143932634_143932713_143932792_143933112_143933196_143933352_143933997_143934092_143934317_143934446_143934634_143934731_143934809_143934930_143935010_143935118_143935197_143935314_143935847_143936015_143936978_143937072_143937164_143937243_143938150_143938241_143938630_143938693_143950183
H1_mix_00083930	chr8	-	14687	32	FSM	ENSG00000178209.17	ENST00000354958.6	14751	32	65	-1	65	1	multi-exon	TRUE	canonical	3	21	junction_2	16.1002323520439	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTGCCTCCGGCCTTGTGT	1	True	NA	-6	True	AATAAA	-17	NA	143953855	143915151	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143922396_143922503_143925885_143926783_143926883_143926976_143927082_143927251_143927336_143927409_143927767_143927853_143927993_143929102_143929282_143929413_143929572_143929645_143929830_143929935_143930063_143930143_143930299_143930383_143930537_143931533_143931660_143931936_143932033_143932129_143932235_143932399_143932562_143932634_143932713_143932792_143933112_143933196_143933352_143933997_143934092_143934317_143934446_143934634_143934731_143934809_143934930_143935010_143935118_143935197_143935314_143935847_143936015_143936978_143937072_143937164_143937243_143938150_143938241_143938630_143938693_143953725
H1_mix_00083933	chr8	-	14788	33	FSM	ENSG00000178209.17	ENST00000436759.6	14787	33	0	-1	0	1	multi-exon	FALSE	canonical	3	8	junction_32	21.3160737472922	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTGCCTCCGGCCTTGTGT	10	True	NA	-6	True	AATAAA	-17	NA	143976734	143915151	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143922396_143922503_143925885_143926783_143926883_143926976_143927082_143927251_143927336_143927409_143927767_143927853_143927993_143929102_143929282_143929413_143929572_143929645_143929830_143929935_143930063_143930143_143930299_143930383_143930537_143931533_143931660_143931936_143932033_143932129_143932235_143932399_143932562_143932634_143932713_143932792_143933112_143933196_143933352_143933997_143934092_143934317_143934446_143934634_143934731_143934809_143934930_143935010_143935118_143935197_143935314_143935847_143936015_143936978_143937072_143937164_143937243_143938150_143938241_143938630_143938693_143975176_143975376_143976702
H1_mix_00083937	chr8	-	635	3	FSM	ENSG00000178814.17	ENST00000527993.1	635	3	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_2	2.5	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGTTCGCAGGGGTGTGT	9348	False	NA	NA	False	NA	NA	NA	144054653	144052769	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144052901_144052982_144053394_144054560
H1_mix_00083940	chr8	-	1687	8	FSM	ENSG00000179526.17	ENST00000359551.6	1687	8	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	169.456032464989	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCATCCCTTTCATGGT	-9	True	NA	-6	True	ATTAAA	-16	NA	144104237	144098636	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144098789_144098865_144098995_144099276_144099431_144099509_144099619_144099702_144099845_144099928_144100070_144103050_144103226_144103552
H1_mix_00083941	chr8	-	933	6	FSM	ENSG00000179526.17	ENST00000534242.5	933	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	223.666358668442	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGAGAAGCCCCAGGTCAGT	-22	True	NA	NA	False	NA	NA	NA	144104250	144099290	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144099431_144099509_144099619_144099702_144099845_144099928_144100070_144103050_144103226_144104024
H1_mix_00083942	chr8	-	2406	17	NNC	ENSG00000261236.8	novel	2428	16	NA	NA	0	27549	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	218.908335553948	759	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAGAAAATAATTCC	-17	True	NA	NA	False	NA	NA	NA	144291438	144234495	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_144234528_144262098_144262318_144262395_144262504_144262587_144262673_144262852_144263142_144263220_144263402_144263477_144263611_144263691_144263762_144263830_144263912_144263980_144264143_144264224_144264438_144264514_144264617_144264713_144264832_144264916_144265072_144276223_144276305_144289094_144289305_144291271
H1_mix_00083946	chr8	-	3653	17	FSM	ENSG00000185000.12	ENST00000528718.6	3653	17	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_10	12.0208152801713	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAGGGTCAGTCCAGGT	-1	True	NA	-11	True	AATACA	-18	NA	144326852	144314583	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144316710_144316852_144316916_144317021_144317110_144317186_144317253_144317332_144317446_144317543_144317589_144317670_144317713_144317783_144317823_144317913_144318018_144318094_144318170_144318260_144318363_144318460_144318567_144318698_144318752_144318834_144318921_144319027_144319069_144321320_144321409_144326436
H1_mix_00083949	chr8	-	2009	5	FSM	ENSG00000182325.11	ENST00000524492.5	2007	5	0	-2	0	2	multi-exon	FALSE	canonical	3	278	junction_3	19.1898410623955	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGGTCCTCAG	511	False	NA	-4	True	AATAAA	-15	NA	144357973	144355428	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144355679_144355967_144356215_144356299_144356532_144356599_144356714_144356807
H1_mix_00083950	chr8	-	1650	9	NNC	ENSG00000182325.11	novel	1745	9	NA	NA	16	2	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_3	96.046131494194	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGGTCCTCAG	28	False	NA	-4	True	AATAAA	-15	NA	144358456	144355428	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_144355679_144355967_144356215_144356299_144356532_144356680_144356714_144356807_144356916_144356989_144357122_144357438_144357503_144357627_144357787_144358031
H1_mix_00083951	chr8	-	1747	9	FSM	ENSG00000182325.11	ENST00000331890.6	1745	9	0	-2	0	2	multi-exon	FALSE	canonical	3	172	junction_6	61.7150710928862	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGGTCCTCAG	12	True	NA	-4	True	AATAAA	-15	NA	144358472	144355428	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144355679_144355967_144356215_144356299_144356532_144356599_144356714_144356807_144356916_144356989_144357122_144357438_144357503_144357627_144357787_144358031
H1_mix_00083952	chr8	-	1729	9	FSM	ENSG00000182325.11	ENST00000455319.6	1727	9	0	-2	0	2	multi-exon	FALSE	canonical	3	36	junction_6	92.9341164481591	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGGTCCTCAG	12	True	NA	-4	True	AATAAA	-15	NA	144358472	144355428	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144355679_144355967_144356215_144356299_144356532_144356599_144356714_144356807_144356916_144356989_144357122_144357456_144357503_144357627_144357787_144358031
H1_mix_00083958	chr8	-	5084	37	FSM	ENSG00000071894.17_ENSG00000147804.10	ENST00000620219.4	4462	37	-622	0	-575	0	multi-exon	FALSE	canonical	3	427	junction_26	74.6379326325048	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCGTGGATGCCGTCACCA	6978	False	NA	-91	True	NA	NA	NA	144409910	144393317	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144393366_144393451_144393591_144393666_144393797_144393882_144394039_144394112_144394161_144394233_144394301_144394378_144394556_144394643_144394797_144394881_144395024_144395097_144395183_144395264_144395356_144395434_144395552_144396347_144396501_144396597_144396742_144396839_144396930_144397206_144397414_144397486_144397662_144397742_144397880_144397953_144398133_144398301_144398444_144398524_144398639_144398778_144398869_144398957_144399039_144399127_144399203_144399275_144399374_144399451_144399504_144399587_144399711_144399780_144399869_144399991_144400086_144400165_144400277_144400353_144400494_144400670_144400818_144400923_144401076_144401210_144401292_144401429_144401564_144401645_144401674_144409014
H1_mix_00083961	chr8	-	772	3	FSM	ENSG00000147804.10	ENST00000531013.1	795	3	24	-1	2	0	multi-exon	FALSE	canonical	3	28	junction_2	3	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGGCTGTGCTCTCCTTG	23	True	NA	-1	True	AGTAAA	-19	NA	144413567	144412413	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144412667_144412758_144412947_144413236
H1_mix_00083963	chr8	-	909	9	FSM	ENSG00000160948.14	ENST00000526054.5	892	9	0	-17	0	1	multi-exon	FALSE	canonical	3	341	junction_5	18.7078693335184	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCCTGCCCTGTGTATT	-9	True	NA	-8	True	AATAAA	-35	NA	144426983	144423599	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144423923_144424040_144424133_144424214_144424269_144424717_144424820_144424945_144425052_144425682_144425773_144426025_144426064_144426179_144426209_144426908
H1_mix_00083965	chr8	-	1082	9	FSM	ENSG00000160948.14	ENST00000377348.6	1097	9	0	15	0	1	multi-exon	FALSE	canonical	3	203	junction_8	58.6024743504914	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGGGTGGCTCCCCCAG	1947	False	NA	-24	True	AATAAA	-19	NA	144428563	144423615	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144424133_144424214_144424269_144424717_144424820_144424945_144425052_144425682_144425773_144426025_144426064_144426179_144426209_144426908_144426980_144428488
H1_mix_00083966	chr8	-	841	9	ISM	ENSG00000160948.14	ENST00000533806.5	650	10	1565	-247	0	0	3prime_fragment	FALSE	canonical	3	32	junction_5	114.712684564524	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTGGGTGGCTCCCCCA	-9	True	NA	-25	True	AATAAA	-18	NA	144426983	144423616	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_-_144423923_144424040_144424133_144424214_144424269_144424717_144424820_144424945_144425001_144425682_144425773_144426025_144426064_144426179_144426209_144426908
H1_mix_00083967	chr8	-	837	10	FSM	ENSG00000160948.14	ENST00000533806.5	650	10	5	-192	0	0	multi-exon	FALSE	canonical	3	32	junction_5	115.611524907156	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGAACTTTGGGGGCCGG	-15	True	NA	-80	True	NA	NA	NA	144428543	144423671	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144423923_144424040_144424133_144424214_144424269_144424717_144424820_144424945_144425001_144425682_144425773_144426025_144426064_144426179_144426209_144426908_144426980_144428488
H1_mix_00083969	chr8	-	6620	17	FSM	ENSG00000160949.18	ENST00000497613.2	6607	17	0	-13	0	13	multi-exon	FALSE	canonical	1	85	junction_9	71.1169810945319	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTGCCTGGCAGGCGGG	1573	False	NA	5	True	AATAAA	-28	NA	144442856	144428761	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144429337_144430403_144430538_144431077_144431152_144432284_144433760_144433977_144434280_144434810_144434890_144435016_144435171_144435473_144435551_144435657_144436419_144436557_144436682_144436756_144436921_144437026_144437100_144438470_144438561_144438652_144438736_144440020_144440211_144440350_144440477_144440717
H1_mix_00083973	chr8	-	11109	2	FSM	ENSG00000187954.13	ENST00000533173.1	6158	2	-4951	0	-8	0	multi-exon	FALSE	canonical	3	270	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTCTGTGTGTCTGCTT	2805	False	NA	0	True	AATAAA	-24	NA	144462879	144451119	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144452571_144453221
H1_mix_00083976	chr8	-	1204	3	FSM	ENSG00000187954.13	ENST00000424149.6	1162	3	-42	0	-23	0	multi-exon	FALSE	canonical	1	7	junction_2	62.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCCATTTTTGAGAGGGA	-6	True	NA	-6	True	AATAAA	-29	NA	144465690	144463816	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144464613_144464808_144465097_144465570
H1_mix_00083977	chr8	-	1785	2	FSM	ENSG00000187954.13	ENST00000403000.6	1477	2	-201	-107	-23	107	multi-exon	FALSE	canonical	3	132	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCATGCAGCCCGGCCTCC	-6	True	NA	NA	False	NA	NA	NA	144465690	144463709	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144464613_144464808
H1_mix_00083981	chr8	-	1627	3	FSM	ENSG00000160973.8	ENST00000525197.1	492	3	6	-1141	6	-320	multi-exon	FALSE	canonical	3	169	junction_2	433.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATGCCTGATTTTTGGG	16	True	NA	-11	True	AGTAAA	-20	NA	144475817	144473731	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144475057_144475156_144475224_144475582
H1_mix_00083983	chr8	-	2161	11	ISM	ENSG00000160957.15	ENST00000617875.6	3819	21	3376	0	57	0	intron_retention	FALSE	canonical	3	348	junction_9	45.0004444422497	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCCCTCTTGGCCAATGA	3408	False	NA	-6	True	AATAAA	-21	NA	144514457	144511287	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_-_144511556_144511680_144511790_144511910_144512068_144512143_144512325_144512391_144512562_144512641_144512772_144512846_144513139_144513217_144513481_144513570_144513713_144513927_144514108_144514188
H1_mix_00083984	chr8	-	3660	20	NIC	ENSG00000160957.15	novel	3896	20	NA	NA	26	0	intron_retention	TRUE	canonical	3	23	junction_7	93.2961210607716	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCCCTCTTGGCCAATGA	9	True	NA	-6	True	AATAAA	-21	NA	144517807	144511287	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_144511556_144511680_144511790_144511910_144512068_144512143_144512325_144512391_144512562_144512641_144512772_144512846_144513139_144513415_144513481_144513570_144513713_144513927_144514108_144514188_144514363_144514441_144514526_144514935_144515073_144515149_144515243_144515325_144515458_144515763_144515891_144515987_144516765_144517049_144517191_144517413_144517509_144517601
H1_mix_00083986	chr8	-	3896	20	FSM	ENSG00000160957.15	ENST00000621189.4	3896	20	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_19	52.1030302551862	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCCCTCTTGGCCAATGA	9180	False	144517865	-6	True	AATAAA	-21	NA	144517845	144511287	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144511556_144511680_144511790_144511910_144512068_144512143_144512325_144512391_144512562_144512641_144512772_144512846_144513139_144513217_144513481_144513570_144513713_144513927_144514108_144514188_144514363_144514441_144514526_144514935_144515073_144515149_144515243_144515325_144515458_144515763_144515891_144515987_144516765_144517049_144517191_144517413_144517509_144517601
H1_mix_00083993	chr8	-	2542	3	FSM	ENSG00000213563.7	ENST00000524821.6	2455	3	19	-106	0	106	multi-exon	FALSE	canonical	3	202	junction_2	16.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGGCCAGCAGGAGCAGG	-11	True	NA	NA	False	AAAAAG	-29	NA	144529092	144525626	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144527788_144528023_144528073_144528760
H1_mix_00083994	chr8	-	1637	4	FSM	ENSG00000213563.7	ENST00000534680.5	1637	4	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	48.8011839564939	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTATTCCATTAAAACTTT	NA	False	NA	-39	True	NA	NA	NA	144529132	144526251	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144526640_144526959_144527788_144528023_144528073_144528760
H1_mix_00083995	chr8	-	802	3	FSM	ENSG00000213563.7	ENST00000532827.1	802	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	91	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGAGGCCGCGGGCGCCTC	525	False	NA	NA	False	NA	NA	NA	144528556	144527323	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144527788_144528023_144528073_144528267
H1_mix_00084000	chr8	-	5263	4	FSM	ENSG00000198169.9	ENST00000525191.2	618	4	-1068	-3577	-92	3577	multi-exon	FALSE	canonical	3	31	junction_3	29.4882274061286	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAGAAAAAGAAATTTT	4931	False	NA	NA	False	AAAAAG	-8	NA	144756509	144749876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144753797_144754191_144754322_144754695_144754804_144755404
H1_mix_00084002	chr8	-	3228	6	NNC	ENSG00000196378.13	novel	2808	6	NA	NA	-2005	0	at_least_one_novel_splicesite	TRUE	canonical	3	22	junction_5	21.9690691655336	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTTTCTTTCTATGTC	9848	False	NA	2	True	CATAAA	-20	NA	144782285	144772223	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_144774606_144777457_144777578_144778037_144778165_144778438_144778526_144780227_144780281_144781826
H1_mix_00084004	chr8	-	718	2	FSM	ENSG00000161016.18	ENST00000534781.1	716	2	0	-2	0	2	multi-exon	FALSE	canonical	3	34600	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCCACCCCCATGGTTT	2668	False	NA	-12	True	AATAAA	-23	NA	144790872	144789762	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144789963_144790354
H1_mix_00084005	chr8	-	699	5	FSM	ENSG00000161016.18	ENST00000531975.5	698	5	0	-1	0	0	multi-exon	TRUE	canonical	0	0	junction_4	12284.5377482224	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCCCACCCCCATGGT	1483	False	NA	-14	True	AATAAA	-21	NA	144792057	144789764	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144789963_144790354_144790471_144791276_144791496_144791772_144791873_144791991
H1_mix_00084006	chr8	-	718	4	FSM	ENSG00000161016.18	ENST00000526668.5	717	4	0	-1	0	0	multi-exon	FALSE	canonical	3	14646	junction_2	9163.97297391621	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTGCCCACCCCCATG	1581	False	NA	-16	True	AATAAA	-19	NA	144791959	144789766	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144789963_144790354_144790471_144791276_144791496_144791772
H1_mix_00084007	chr8	-	965	6	FSM	ENSG00000161016.18	ENST00000394920.6	965	6	0	0	0	0	multi-exon	FALSE	canonical	3	1226	junction_5	10634.3584592584	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTGTGCCCACCCCCA	15	True	NA	-18	True	AATAAA	-17	NA	144792389	144789768	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144789963_144790354_144790471_144791276_144791496_144791772_144791915_144791991_144792141_144792244
H1_mix_00084008	chr8	-	1070	5	FSM	ENSG00000161016.18	ENST00000528957.6	1070	5	0	0	0	0	multi-exon	FALSE	canonical	3	14646	junction_2	8153.01598719762	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTGTGCCCACCCCCA	14	True	NA	-18	True	AATAAA	-17	NA	144792390	144789768	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144789963_144790354_144790471_144791276_144791496_144791772_144791915_144791991
H1_mix_00084009	chr8	-	1041	6	FSM	ENSG00000161016.18	ENST00000262584.7	1041	6	0	0	0	0	multi-exon	FALSE	canonical	3	7798	junction_5	8905.32245345445	5866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGCTGTGCCCACCCCC	953	False	NA	-19	True	AATAAA	-16	NA	144792587	144789769	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144789963_144790354_144790471_144791276_144791496_144791772_144791915_144791991_144792141_144792365
H1_mix_00084010	chr8	-	745	5	FSM	ENSG00000161016.18	ENST00000532702.1	745	5	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_4	6847.42086482202	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTAACCCAGAAATGCA	20	True	NA	NA	False	NA	NA	NA	144792384	144790354	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144790471_144791276_144791496_144791772_144791915_144791991_144792141_144792265
H1_mix_00084013	chr8	-	1576	2	FSM	ENSG00000170619.10	ENST00000543949.2	1571	2	0	-5	0	4	multi-exon	FALSE	canonical	2	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCGTGTGATGCAGCAAG	-31	True	NA	1	True	AATAAA	-34	NA	144853067	144850161	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144851396_144852725
H1_mix_00084018	chr8	-	674	5	ISM	ENSG00000196150.14	ENST00000417550.7	6337	6	30	9636	0	3096	5prime_fragment	FALSE	canonical	3	52	junction_4	11.4127122105133	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTCCTTTTATTTGT	24	True	NA	1	True	ATTAAA	-21	NA	144901423	144886590	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_-_144886903_144889580_144889695_144889932_144890060_144890307_144890404_144901398
H1_mix_00084019	chr8	-	2617	3	FSM	ENSG00000170631.15	ENST00000394909.7	2522	3	5	-100	0	100	multi-exon	FALSE	canonical	3	50	junction_1	2.5	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTACCTACTCATCACCAC	-26	True	NA	NA	False	NA	NA	NA	144950875	144930257	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144932591_144946010_144946216_144950796
H1_mix_00084021	chr8	-	5265	2	NNC	ENSG00000196922.11	novel	5210	3	NA	NA	4697	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGCCCATTTTCATGTA	NA	False	NA	-1	True	ATTAAA	-20	NA	144991465	144973588	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_144978554_144991165
H1_mix_00084027	chr8	+	250	1	Intergenic	novelGene_1417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCCTTTATTATGATC	NA	False	NA	NA	False	AGTAAA	-20	NA	6277820	6278070	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_6277800_6278100
H1_mix_00084028	chr8	+	3877	1	Intergenic	novelGene_1431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTACTTCATTTAGATT	7793	False	NA	NA	False	AAGAAA	-14	NA	8136337	8140214	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_8136300_8140200
H1_mix_00084030	chr8	+	3101	1	Intergenic	novelGene_1439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTAATTTCTTCTTACT	NA	False	NA	NA	False	NA	NA	NA	12513332	12516433	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_12513300_12516400
H1_mix_00084031	chr8	+	8063	1	Intergenic	novelGene_1443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATAAAAGGTCACCTTTAC	NA	False	NA	NA	False	NA	NA	NA	12539255	12547318	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_12539300_12547300
H1_mix_00084032	chr8	+	5454	1	Intergenic	novelGene_1445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	398	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAATGAGAAGTTCAGGT	NA	False	NA	NA	False	NA	NA	NA	12583742	12589196	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_12583700_12589200
H1_mix_00084033	chr8	+	207	1	Intergenic	novelGene_1450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12647116	12647323	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_12647100_12647300
H1_mix_00084034	chr8	+	326	1	Intergenic	novelGene_1451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCAAAAGTGACCACATTA	NA	False	NA	NA	False	AAAAAG	-9	NA	16142047	16142373	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_16142000_16142400
H1_mix_00084036	chr8	+	2843	1	FSM	ENSG00000289357.1	ENST00000688186.1	957	1	28	-1914	28	1914	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTCTATCCAAATTTCT	5	False	NA	NA	False	NA	NA	NA	25508806	25511649	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_25508800_25511600
H1_mix_00084037	chr8	+	2918	1	Intergenic	novelGene_1458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGTAATTTTTTGTGTG	1686	False	NA	NA	False	NA	NA	NA	35237179	35240097	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_35237200_35240100
H1_mix_00084038	chr8	+	326	1	Intergenic	novelGene_1461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGCTTTTATTGTGGGA	NA	False	NA	NA	False	NA	NA	NA	46469694	46470020	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_46469700_46470000
H1_mix_00084039	chr8	+	242	1	Intergenic	novelGene_1462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	235	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACGATTGTCTCGTCGGCT	772	False	NA	NA	False	NA	NA	NA	53713356	53713598	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_53713400_53713600
H1_mix_00084041	chr8	+	333	1	Intergenic	novelGene_1467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATCATTTTCTCCACCTT	NA	False	NA	28	True	AATAAA	-33	NA	54455330	54455663	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_54455300_54455700
H1_mix_00084042	chr8	+	316	1	Intergenic	novelGene_1468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTCTGAATTCTTAATCT	3382	False	NA	NA	False	NA	NA	NA	55847661	55847977	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_55847700_55848000
H1_mix_00084044	chr8	+	949	1	Intergenic	novelGene_1471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATCACCCTTATCCCACT	NA	False	NA	NA	False	ATTAAA	-3	NA	68975181	68976130	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_68975200_68976100
H1_mix_00084045	chr8	+	208	1	Intergenic	novelGene_1472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	340	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAGCCTTTCTGTCCAA	NA	False	NA	NA	False	NA	NA	NA	68976545	68976753	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_68976500_68976800
H1_mix_00084047	chr8	+	339	1	Intergenic	novelGene_1476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTGGGCATGTTGAGTA	NA	False	NA	NA	False	NA	NA	NA	79387251	79387590	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_79387300_79387600
H1_mix_00084048	chr8	+	218	1	Intergenic	novelGene_1478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGACGGGCTTACCTTCCA	NA	False	NA	NA	False	NA	NA	NA	79389058	79389276	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_79389100_79389300
H1_mix_00084049	chr8	+	386	1	Intergenic	novelGene_1481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACATAATAATGTTATCTG	NA	False	NA	NA	False	TTTAAA	-24	NA	80644464	80644850	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_80644500_80644800
H1_mix_00084050	chr8	+	304	1	Intergenic	novelGene_1483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTGGTGAGGAAAGTGG	NA	False	NA	NA	False	AAAAAG	-1	NA	89101254	89101558	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_89101300_89101600
H1_mix_00084051	chr8	+	4994	1	Intergenic	novelGene_1485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	918	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGAGATCAGATATTATAT	4279	False	NA	NA	False	NA	NA	NA	89702327	89707321	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_89702300_89707300
H1_mix_00084052	chr8	+	252	1	Intergenic	novelGene_1487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCCAAATTTCCTCCTCA	NA	False	NA	NA	False	NA	NA	NA	97204060	97204312	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_97204100_97204300
H1_mix_00084053	chr8	+	355	1	Intergenic	novelGene_1488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCTGTCGGACATAATTC	NA	False	NA	NA	False	NA	NA	NA	97204910	97205265	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_97204900_97205300
H1_mix_00084054	chr8	+	621	1	Intergenic	novelGene_1489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTTCTCAGAATTCAGGC	2723	False	NA	NA	False	AAAAAG	-25	NA	99947837	99948458	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_99947800_99948500
H1_mix_00084057	chr8	+	304	1	Intergenic	novelGene_1490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAATGAATGGCTTAATTC	NA	False	NA	NA	False	NA	NA	NA	108669753	108670057	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_108669800_108670100
H1_mix_00084059	chr8	+	1120	1	Intergenic	novelGene_1492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAAGTGTCTCAGGGTTG	NA	False	NA	NA	False	NA	NA	NA	113512146	113513266	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_113512100_113513300
H1_mix_00084060	chr8	+	279	1	Intergenic	novelGene_1493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCAAGATGGCTTCAGG	NA	False	NA	NA	False	NA	NA	NA	114029555	114029834	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_114029600_114029800
H1_mix_00084061	chr8	+	260	1	Intergenic	novelGene_1495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTAGTTTCTCAATTCAT	NA	False	NA	NA	False	NA	NA	NA	114246090	114246350	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_114246100_114246400
H1_mix_00084064	chr8	+	1031	1	Intergenic	novelGene_1498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTGCCTGTTTCCTGATG	NA	False	NA	NA	False	NA	NA	NA	118001371	118002402	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_118001400_118002400
H1_mix_00084065	chr8	+	1015	1	Intergenic	novelGene_1499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	274	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCCTGATAGATGACACCA	5636	False	NA	NA	False	AAAAAG	-4	NA	118089798	118090813	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_118089800_118090800
H1_mix_00084066	chr8	+	300	1	Intergenic	novelGene_1500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	230	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGCTTATTTTTCATGA	NA	False	NA	NA	False	NA	NA	NA	125402264	125402564	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_125402300_125402600
H1_mix_00084067	chr8	+	359	1	Intergenic	novelGene_1503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCCAATTCTTAGACCTT	NA	False	NA	NA	False	NA	NA	NA	127436321	127436680	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_127436300_127436700
H1_mix_00084069	chr8	+	209	1	Intergenic	novelGene_1507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATACAAGAGGAGGACGCAA	NA	False	NA	NA	False	NA	NA	NA	132082883	132083092	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_132082900_132083100
H1_mix_00084070	chr8	+	260	1	Intergenic	novelGene_1508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGCCGCTGCAGTTCAA	5265	False	NA	NA	False	NA	NA	NA	135770377	135770637	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_135770400_135770600
H1_mix_00084075	chr8	+	1763	1	Intergenic	novelGene_1512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CTCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	144680478	144682241	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_144680500_144682200
H1_mix_00084076	chr8	+	269	4	FSM	ENSG00000172748.14	ENST00000523333.1	520	4	251	0	251	0	multi-exon	FALSE	canonical	1	3	junction_2	1.88561808316413	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTCAACATATCTATCAG	8442	False	NA	NA	False	ATTAAA	-17	NA	240885	244654	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_240908_242886_243014_243721_243806_244618
H1_mix_00084077	chr8	+	5561	5	NNC	ENSG00000182372.10	novel	1958	4	NA	NA	-61	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	80.2044263117691	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGACGTCTCTATTTCCT	3260	False	NA	23	True	AATATA	-39	NA	1763698	1786566	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_1763886_1770931_1771598_1780249_1780882_1782355_1785417_1785551
H1_mix_00084078	chr8	+	1920	3	FSM	ENSG00000182372.10	ENST00000637156.1	1897	3	-23	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	76	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTCTCTCTCAAAAAAAAA	-4	True	NA	NA	False	NA	NA	NA	1763776	1781354	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_1763926_1770931_1771598_1780249
H1_mix_00084080	chr8	+	292	1	ISM	ENSG00000182372.10	ENST00000636934.1	1790	3	37443	177	1248	-177	mono-exon	FALSE	NA	NA	NA	NA	NA	223	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTTGCGACCCCCACTC	NA	False	NA	NA	False	AAAAAG	-13	NA	1801242	1801534	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_1801200_1801500
H1_mix_00084081	chr8	+	5638	29	NIC	ENSG00000104728.16	novel	5648	29	NA	NA	14	1	combination_of_known_junctions	FALSE	canonical	3	22	junction_8	32.5995336137917	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATGAGTTGCCTCTTTT	-2	True	NA	31	True	AATAAA	-23	NA	1823939	1958642	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_1824114_1843352_1843437_1857959_1858116_1859896_1860185_1864369_1864437_1866525_1866603_1869193_1869251_1876570_1876735_1880047_1880165_1882634_1882750_1885600_1885708_1893568_1893647_1894392_1894573_1896332_1896450_1898432_1898526_1903280_1903452_1905570_1905717_1909294_1909471_1922963_1923080_1923467_1923596_1923773_1923875_1925282_1925405_1926376_1926464_1928426_1928651_1929285_1929444_1933799_1933943_1945480_1945656_1952704_1952828_1956748
H1_mix_00084082	chr8	+	5467	28	NIC	ENSG00000104728.16	novel	5472	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	28.9136645896019	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAGGATGAGTTGCCTCT	17	False	NA	28	True	AATAAA	-20	NA	1823987	1958639	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_1824114_1843352_1843437_1857959_1858116_1859896_1860185_1864372_1864437_1866525_1866603_1869193_1869251_1876570_1876735_1882634_1882750_1885600_1885708_1893568_1893647_1894392_1894573_1896332_1896450_1898432_1898526_1903280_1903452_1905570_1905717_1909294_1909471_1922963_1923080_1923467_1923596_1923773_1923875_1925282_1925405_1926376_1926464_1928426_1928651_1929285_1929444_1933799_1933943_1945480_1945656_1952704_1952828_1956748
H1_mix_00084083	chr8	+	2349	4	FSM	ENSG00000104728.16	ENST00000522969.1	2349	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	13.589211407093	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCAGTAAACCATAAAAG	1139	False	NA	NA	False	NA	NA	NA	1859914	1871131	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_1860185_1864372_1864437_1866525_1866603_1869193
H1_mix_00084086	chr8	+	820	2	NIC	ENSG00000176595.4	novel	6911	2	NA	NA	19	-30458	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTGCATGTCTTATGTGC	-2	True	NA	NA	False	AATAAA	-21	NA	1973695	1976478	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_1973936_1975898
H1_mix_00084087	chr8	+	636	2	NNC	ENSG00000176595.4	novel	6911	2	NA	NA	35	-31702	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGAACTTTCCATGTC	14	True	NA	NA	False	AGTAAA	-18	NA	1973711	1975234	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_1973936_1974822
H1_mix_00084089	chr8	+	852	3	FSM	ENSG00000155189.12	ENST00000518327.1	852	3	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_1	453	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGCTGCATTTTTGAGC	-1	True	NA	NA	False	NA	NA	NA	6708692	6757695	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_6708888_6755050_6755175_6757162
H1_mix_00084090	chr8	+	256	1	FSM	ENSG00000284620.2	ENST00000641842.1	219	1	-153	116	-153	-116	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGCTGTTGCTGGAGGGG	NA	False	NA	NA	False	NA	NA	NA	7091948	7092204	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_7091900_7092200
H1_mix_00084091	chr8	+	259	1	ISM	ENSG00000284620.2	ENST00000641821.1	1151	4	94685	32	77673	-32	mono-exon	FALSE	NA	NA	NA	NA	NA	262	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAATCAATAAAAACTGAGG	NA	False	NA	NA	False	AATGAA	-5	NA	7186959	7187218	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_7187000_7187200
H1_mix_00084093	chr8	+	1301	2	Intergenic	novelGene_1423	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCTCAATGTCCAGAAAATA	NA	False	NA	NA	False	NA	NA	NA	7609000	7616429	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_7609895_7616022
H1_mix_00084094	chr8	+	218	1	FSM	ENSG00000284617.1	ENST00000641758.1	218	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3774	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGATGCGGGCGCGGG	82	False	NA	NA	False	NA	NA	NA	7611472	7611690	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_7611500_7611700
H1_mix_00084095	chr8	+	2724	2	NNC	ENSG00000284606.1	novel	3196	4	NA	NA	-38	-112825	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	0	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGTTATGGTGGTGAGTG	156	False	NA	NA	False	NA	NA	NA	8059533	8067702	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_8059675_8065119
H1_mix_00084096	chr8	+	1158	3	Fusion	ENSG00000284603.1_ENSG00000284606.1	novel	3297	4	NA	NA	-38	12340	multi-exon	FALSE	canonical	3	44	junction_1	73.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATAATTATTTTTGTAAA	156	False	NA	NA	False	AATAAA	-34	NA	8059533	8072014	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr8_+_8059675_8065119_8065817_8071694
H1_mix_00084098	chr8	+	6514	2	NNC	ENSG00000249188.1	novel	999	3	NA	NA	-599	-55372	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	0	67	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGTCTCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8153708	8161544	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_8154531_8155852
H1_mix_00084099	chr8	+	1049	8	NIC	ENSG00000173295.9	novel	1858	9	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_7	6.9045976991969	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAGTGGCTCAGCGTGCA	20	False	NA	NA	False	NA	NA	NA	8228610	8244162	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_8228798_8230842_8230906_8232793_8232875_8234482_8234585_8235815_8235950_8236031_8236300_8237125_8237276_8244098
H1_mix_00084100	chr8	+	493	2	FSM	ENSG00000173295.9	ENST00000588159.1	493	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCATCTCCAACATCCCT	NA	False	NA	NA	False	NA	NA	NA	8241274	8244185	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_8241681_8244098
H1_mix_00084101	chr8	+	399	2	FSM	ENSG00000173295.9	ENST00000587202.1	399	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAGTGGCTCAGCGTGCA	NA	False	NA	NA	False	NA	NA	NA	8241627	8244162	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_8241963_8244098
H1_mix_00084102	chr8	+	1275	8	NIC	ENSG00000104626.15	novel	2107	8	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_6	79.1542023843462	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATATTCGTGTTGTACA	33	False	NA	10	True	AATAAA	-23	NA	9002946	9100099	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_9003172_9007969_9008149_9011541_9011753_9016321_9016406_9018296_9018407_9020349_9020465_9088459_9088570_9099858
H1_mix_00084103	chr8	+	750	6	FSM	ENSG00000104626.15	ENST00000520332.5	750	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	89.6682775567815	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATATTCGTGTTGTACA	3697	False	NA	10	True	AATAAA	-23	NA	9011662	9100099	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_9011753_9016321_9016406_9018296_9018407_9020349_9020465_9088459_9088570_9099858
H1_mix_00084104	chr8	+	638	3	NIC	ENSG00000104626.15	novel	392	3	NA	NA	12851	161	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGATAATAATAATAATAACA	2	True	NA	NA	False	AATAAA	-32	NA	9062668	9100262	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_9062785_9096742_9096861_9099858
H1_mix_00084106	chr8	+	4110	28	NNC	ENSG00000173273.16	novel	9622	27	NA	NA	-6	-4257	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_27	42.2685256176214	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAAGGTTGATTCTGTAC	5	True	NA	NA	False	AATAAA	-21	NA	9555925	9772672	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_9556613_9580158_9580384_9615581_9615678_9679950_9679988_9680724_9680801_9704662_9704758_9706186_9706254_9706810_9706998_9708370_9708493_9709954_9710047_9710141_9710221_9720373_9720546_9726640_9726721_9730889_9731036_9733278_9733445_9734864_9735085_9735376_9735487_9748023_9748213_9751608_9751847_9752543_9752627_9761515_9761637_9763146_9763245_9764715_9764791_9765691_9765798_9766238_9766426_9770105_9770263_9772368_9772424_9772528
H1_mix_00084108	chr8	+	3645	1	FSM	ENSG00000272505.1	ENST00000606115.1	2860	1	-627	-158	-627	158	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCATTTTTTCCTCGCAT	NA	False	NA	NA	False	NA	NA	NA	10486179	10489824	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_10486200_10489800
H1_mix_00084109	chr8	+	1152	1	FSM	ENSG00000270076.1	ENST00000602443.1	707	1	-451	6	-451	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCTAGAAAATAGGTGCAA	1371	False	NA	7	True	AATAAA	-19	NA	11202513	11203665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_11202500_11203700
H1_mix_00084110	chr8	+	851	3	FSM	ENSG00000136574.19	ENST00000526974.1	832	3	-19	0	-19	0	multi-exon	FALSE	canonical	3	4	junction_1	4.5	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGCCTTCATGCACGGCGC	NA	False	NA	NA	False	NA	NA	NA	11692606	11708381	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_11692661_11700507_11700779_11707855
H1_mix_00084111	chr8	+	2523	6	ISM	ENSG00000136574.19	ENST00000532059.6	3419	7	-815	2920	-764	0	5prime_fragment	FALSE	canonical	3	121	junction_2	117.256982734505	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACGCGCCATGGCTGGGG	3035	False	NA	NA	False	NA	NA	NA	11703386	11757082	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_11704305_11707855_11708929_11748915_11749086_11750110_11750237_11755045_11755134_11756934
H1_mix_00084116	chr8	+	339	3	FSM	ENSG00000255052.5	ENST00000658322.1	2763	3	0	2424	0	-2424	multi-exon	FALSE	canonical	3	12	junction_2	1.5	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAAGACTGACTGGTCC	NA	False	NA	NA	False	NA	NA	NA	12116231	12145603	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_12116326_12121986_12122051_12145422
H1_mix_00084117	chr8	+	1842	1	FSM	ENSG00000270074.1	ENST00000602981.1	1547	1	-302	7	-302	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTATACTTTGTCTCTG	NA	False	NA	NA	False	NA	NA	NA	12412524	12414366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_12412500_12414400
H1_mix_00084118	chr8	+	2955	6	Intergenic	novelGene_1436	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	51	junction_2	141.765157919709	635	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCCAAACCTGGGGGATT	47	False	NA	NA	False	NA	NA	NA	12437256	12567717	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_12437711_12438163_12438512_12440968_12441062_12444755_12444895_12530942_12531032_12565885
H1_mix_00084119	chr8	+	1217	1	FSM	ENSG00000270154.1	ENST00000602979.1	661	1	0	-556	0	556	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGAGCGAGACTCTGTCT	NA	False	NA	NA	False	NA	NA	NA	12476461	12477678	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_12476500_12477700
H1_mix_00084120	chr8	+	2581	3	Antisense	novelGene_ENSG00000283674.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	104	junction_1	155.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCCAAACCTGGGGGATT	NA	False	NA	NA	False	NA	NA	NA	12497189	12567717	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr8_+_12497850_12530942_12531032_12565885
H1_mix_00084121	chr8	+	2153	3	Antisense	novelGene_ENSG00000283674.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	89	junction_1	163	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAATGTCACATTCCTAT	NA	False	NA	NA	False	AATATA	-24	NA	12497237	12567297	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr8_+_12497890_12530942_12531032_12565885
H1_mix_00084122	chr8	+	1593	3	Antisense	novelGene_ENSG00000283674.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	205	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAATGTCACATTCCTAT	NA	False	NA	NA	False	AATATA	-24	NA	12520339	12567297	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr8_+_12520432_12530942_12531032_12565885
H1_mix_00084123	chr8	+	1595	3	Antisense	novelGene_ENSG00000283674.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	193	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAATGTCACATTCCTAT	18	False	NA	NA	False	AATATA	-24	NA	12521384	12567297	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr8_+_12521479_12530942_12531032_12565885
H1_mix_00084124	chr8	+	3551	1	Genic_Genomic	ENSG00000255122.1	novel	NA	NA	NA	NA	-3109	-335	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCTTTTCTGTATTAAA	NA	False	NA	-30	True	NA	NA	NA	12577177	12580728	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr8_+_12577200_12580700
H1_mix_00084125	chr8	+	6003	2	FSM	ENSG00000250305.9	ENST00000529978.1	6003	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAACAAATTAGGGCA	2747	False	NA	NA	False	NA	NA	NA	13012012	13026165	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_13012858_13021007
H1_mix_00084129	chr8	+	1002	3	NNC	ENSG00000104219.13	novel	5924	13	NA	NA	-546	3367	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	147	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCATCTTAAGGTTTTCT	NA	False	NA	NA	False	NA	NA	NA	17155935	17188182	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_17156854_17184788_17184816_17188125
H1_mix_00084130	chr8	+	596	4	FSM	ENSG00000155975.10	ENST00000519381.1	575	4	-21	0	-21	0	multi-exon	FALSE	canonical	3	10	junction_1	164.570822309289	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCCTCAGGAAAAACCAGT	NA	False	NA	NA	False	NA	NA	NA	17246909	17268273	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_17247370_17265770_17265816_17265906_17265982_17268257
H1_mix_00084131	chr8	+	1652	11	ISM	ENSG00000155975.10	ENST00000324849.9	4519	12	13	11413	13	0	5prime_fragment	FALSE	canonical	3	298	junction_3	23.1302831802812	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGGATATTTTCTGTG	14	True	NA	17	True	TATAAA	-18	NA	17246970	17286611	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_17247370_17265906_17265982_17268257_17268373_17268855_17268957_17274732_17274959_17276396_17276468_17280027_17280156_17280238_17280298_17280374_17280444_17284472_17284617_17286346
H1_mix_00084132	chr8	+	1661	12	NIC	ENSG00000155975.10	novel	4519	12	NA	NA	49	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	124.776891800015	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGGATATTTTCTGTG	3	True	NA	17	True	TATAAA	-18	NA	17247006	17286611	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_17247370_17265770_17265816_17265906_17265982_17268257_17268373_17268855_17268957_17274732_17274959_17276396_17276468_17280027_17280156_17280238_17280298_17280374_17280444_17284472_17284617_17286346
H1_mix_00084133	chr8	+	266	2	FSM	ENSG00000155975.10	ENST00000519515.1	266	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTCATGTTGATGTTTT	NA	False	NA	NA	False	AAAAAG	-17	NA	17298106	17302427	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_17298159_17302213
H1_mix_00084134	chr8	+	7609	12	FSM	ENSG00000003989.18	ENST00000522656.5	2274	12	-93	-5242	-90	-45	multi-exon	FALSE	canonical	3	24	junction_1	13.8957154940258	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTTTCTGATGTGGTGT	2647	False	NA	22	True	AATAAA	-29	NA	17496997	17570516	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_17497238_17543317_17543716_17544450_17544607_17548677_17548844_17550300_17550435_17551763_17551987_17554559_17554700_17558294_17558398_17560327_17560534_17561943_17562111_17563602_17563712_17564949
H1_mix_00084137	chr8	+	2536	15	FSM	ENSG00000078674.19	ENST00000517730.5	2536	15	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_7	57.2606375466157	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAACACTAGAGGAAATGC	2	True	NA	NA	False	NA	NA	NA	17922989	17960103	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17940041_17940159_17947185_17947364_17950614_17950725_17952969_17953187_17955469_17955654_17956603_17956778_17957263_17957422_17957539_17957776_17960013
H1_mix_00084138	chr8	+	6462	39	NIC	ENSG00000078674.19	novel	8652	39	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_12	93.7199517865907	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTTGACACTGCTTTTT	3	True	NA	16	True	AATAAA	-26	NA	17922990	18027758	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17947185_17947364_17950614_17950725_17952969_17953187_17955469_17955654_17956603_17956778_17957263_17957422_17957536_17957776_17960013_17960166_17960314_17960445_17962033_17962175_17963100_17963292_17964567_17964769_17965998_17966219_17966327_17966474_17966979_17967171_17969576_17969749_17972328_17972688_17980590_17980756_17985446_17985620_17985958_17986088_17989858_17989980_17991541_17991701_17993482_17993620_18006262_18006398_18009546_18009745_18010608_18010669_18011236_18011367_18011666_18011828_18013963_18014037_18014583_18014841_18025360_18025454_18025543_18025659_18027636
H1_mix_00084139	chr8	+	6489	40	NIC	ENSG00000078674.19	novel	6443	39	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	110.29955625683	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTTGACACTGCTTTTT	3	True	NA	16	True	AATAAA	-26	NA	17922990	18027758	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_17923189_17924712_17924781_17934705_17934859_17935588_17935707_17937133_17937380_17938838_17939010_17939690_17939862_17947185_17947364_17950614_17950725_17952969_17953187_17955469_17955654_17956603_17956778_17957263_17957422_17957539_17957776_17960013_17960166_17960314_17960445_17962033_17962175_17963100_17963292_17964567_17964769_17965998_17966219_17966327_17966474_17966979_17967171_17969576_17969749_17972328_17972688_17980590_17980756_17985446_17985620_17985958_17986088_17989858_17989980_17991541_17991677_17993482_17993620_18006262_18006398_18009546_18009745_18010608_18010669_18011236_18011367_18011666_18011828_18013963_18014037_18014583_18014841_18025360_18025454_18025543_18025659_18027636
H1_mix_00084140	chr8	+	4495	17	NNC	ENSG00000078674.19	novel	5955	35	NA	NA	-3218	3193	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_16	93.889874820185	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGTTGTGATGTTTTCT	NA	False	NA	12	True	AATAAA	-22	NA	17954439	17989456	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_17955654_17956603_17956778_17957263_17957422_17957536_17957776_17960013_17960166_17960314_17960445_17962033_17962175_17963100_17963292_17964567_17964769_17965998_17966219_17966327_17966474_17966979_17967171_17969576_17969749_17972328_17972688_17985446_17985620_17985958_17986088_17988951
H1_mix_00084143	chr8	+	447	4	FSM	ENSG00000245281.8	ENST00000517747.5	817	4	0	370	0	-370	multi-exon	FALSE	canonical	1	1	junction_1	3.09120616516523	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACTTATTTTATAGTAAG	467	False	NA	NA	False	AATAAA	-21	NA	18084888	18087122	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_18084940_18085241_18085486_18086882_18086937_18087024
H1_mix_00084150	chr8	+	670	6	FSM	ENSG00000147416.11	ENST00000519667.1	670	6	0	0	0	0	multi-exon	FALSE	canonical	3	1077	junction_4	60.6728934533371	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCAGTGTTATTGTTTGT	52	False	NA	NA	False	AATAAA	-17	NA	20197438	20211415	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_20197543_20204483_20204540_20209432_20209532_20210345_20210440_20210568_20210647_20211176
H1_mix_00084152	chr8	+	1087	9	FSM	ENSG00000158806.14	ENST00000289820.10	1100	9	0	13	0	-12	multi-exon	TRUE	canonical	2	3	junction_1	3.56195171219375	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGTCAGGACTTTCCT	70	False	NA	NA	False	AATAAA	-3	NA	22024842	22036884	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22025050_22025215_22025307_22025435_22025522_22025646_22025773_22033129_22033224_22034108_22034276_22034509_22034545_22036492_22036527_22036637
H1_mix_00084154	chr8	+	616	4	FSM	ENSG00000158856.19	ENST00000522148.5	616	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	12.0277457017791	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTGAGTCTGCCCCACA	7	True	NA	NA	False	NA	NA	NA	22048994	22069056	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22049225_22066704_22066894_22067526_22067683_22069015
H1_mix_00084155	chr8	+	1313	3	ISM	ENSG00000158856.19	ENST00000523266.5	2735	16	21596	6	14286	6	3prime_fragment	FALSE	canonical	3	14	junction_1	9.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGGTCCCTACATCTGT	NA	False	NA	-6	True	ATTAAA	-7	NA	22080801	22082512	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_22080871_22081112_22081194_22081349
H1_mix_00084156	chr8	+	932	7	FSM	ENSG00000158863.22	ENST00000427751.5	932	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	32.0542075587936	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGGCAGCAGAGATGGA	-6	True	NA	NA	False	NA	NA	NA	22089183	22098310	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22089299_22089760_22089855_22094439_22094519_22096336_22096510_22097515_22097621_22097716_22097840_22098067
H1_mix_00084157	chr8	+	2870	18	FSM	ENSG00000158863.22	ENST00000450006.7	2846	18	-24	0	0	0	multi-exon	FALSE	canonical	1	1	junction_17	21.5348755522734	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTGGCTCTGTTCTTGGCC	-6	True	NA	28	True	AATAAA	-20	NA	22089183	22104382	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22089299_22094439_22094519_22096336_22096510_22097515_22097621_22097716_22097840_22098067_22098311_22098422_22098620_22098947_22099057_22099283_22099361_22099703_22099894_22100593_22100740_22100843_22100973_22101439_22101531_22101707_22101852_22102174_22102316_22102527_22102629_22102792_22103186_22104068
H1_mix_00084163	chr8	+	2687	21	NNC	ENSG00000197181.12	novel	3488	22	NA	NA	-9	-33504	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_20	6.35295206970744	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTGGTTTTTTTTTTT	7	True	NA	8	True	AATAAA	-14	NA	22275327	22322012	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_22275399_22279340_22279585_22281119_22281208_22281376_22281516_22283033_22283241_22284161_22284273_22287527_22287646_22288541_22288667_22289846_22289928_22290232_22290347_22304020_22304210_22304783_22304869_22305926_22306017_22307932_22308074_22309960_22310075_22311111_22311301_22314327_22314430_22315028_22315146_22316244_22316334_22318169_22318276_22321845
H1_mix_00084164	chr8	+	839	4	FSM	ENSG00000104635.15	ENST00000517370.1	839	4	0	0	0	0	multi-exon	FALSE	canonical	3	1445	junction_1	218.037203757116	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGAGCTAGGTAAGCGTG	NA	False	NA	NA	False	NA	NA	NA	22411876	22416269	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22412207_22414779_22414903_22415768_22415958_22416072
H1_mix_00084170	chr8	+	1952	11	ISM	ENSG00000120896.14	ENST00000240123.12	3227	21	13356	293	0	0	3prime_fragment	FALSE	canonical	3	129	junction_1	169.858176135269	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGTCTCTGCGGCCTTTT	10	True	NA	21	True	AATAAA	-16	NA	22565282	22575495	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_22565355_22565825_22565873_22566344_22566485_22566660_22566714_22566821_22566869_22567060_22567176_22569147_22569274_22570909_22571222_22571717_22571822_22572339_22572447_22574666
H1_mix_00084172	chr8	+	2065	10	NIC	ENSG00000120896.14	novel	3067	19	NA	NA	11	0	intron_retention	FALSE	canonical	3	22	junction_1	208.695477835855	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGTCTCTGCGGCCTTTT	21	True	NA	21	True	AATAAA	-16	NA	22566011	22575495	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_22566244_22566344_22566485_22566660_22566714_22566821_22566869_22567060_22567176_22569147_22569274_22570909_22571222_22571717_22571822_22572339_22572447_22574666
H1_mix_00084174	chr8	+	1960	10	FSM	ENSG00000120913.24	ENST00000397761.6	1491	10	-472	3	-63	0	multi-exon	TRUE	canonical	1	1	junction_1	130.118749182771	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGCTCTATAAATATATGA	418	False	NA	-21	True	GGGGCT	-32	NA	22578677	22594262	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_22579225_22580602_22580698_22581378_22581531_22584820_22584891_22585016_22585163_22585320_22585400_22589297_22589375_22589595_22589742_22591550_22591669_22593732
H1_mix_00084175	chr8	+	1750	9	NIC	ENSG00000120913.24	novel	2236	10	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	108.411181964777	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAGTAGATGTCCCT	-1	True	NA	7	True	TATAAA	-16	NA	22579141	22594290	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_22579528_22580602_22580698_22581378_22581531_22584820_22584891_22585016_22585163_22585320_22585400_22589595_22589742_22591550_22591669_22593732
H1_mix_00084177	chr8	+	2108	8	NIC	ENSG00000248235.6	novel	977	5	NA	NA	0	2049	combination_of_known_splicesites	FALSE	canonical	3	12	junction_2	102.267755805782	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGTGCTTTGTAAACCT	-26	True	NA	9	True	ATTAAA	-6	NA	22589273	22604133	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_22589375_22589595_22589742_22600881_22601358_22601711_22601853_22601971_22602081_22602199_22602313_22602560_22602644_22603194
H1_mix_00084179	chr8	+	282	1	FSM	ENSG00000243265.1	ENST00000498163.1	452	1	-88	258	-88	-258	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATGCTATCATCAAGCTT	NA	False	NA	NA	False	NA	NA	NA	23206829	23207111	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_23206800_23207100
H1_mix_00084180	chr8	+	359	2	FSM	ENSG00000246582.3	ENST00000517774.1	499	2	140	0	140	0	multi-exon	FALSE	canonical	3	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTGGATTTTCCTAACC	3535	False	NA	NA	False	NA	NA	NA	23224610	23225882	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_23224892_23225804
H1_mix_00084181	chr8	+	3749	13	Fusion	ENSG00000246582.3_ENSG00000147457.14	novel	3367	10	NA	NA	0	0	multi-exon	FALSE	canonical	3	24	junction_1	124.81341630165	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTTGTCCCGTCTCCTC	262	False	NA	10	True	ATTAAA	-11	NA	23225478	23261992	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr8_+_23225626_23225804_23226124_23228065_23228154_23246255_23246995_23249209_23249382_23255246_23255433_23256459_23256594_23258032_23258082_23258329_23258450_23258731_23258831_23259065_23259127_23260143_23260324_23260537
H1_mix_00084182	chr8	+	1684	7	FSM	ENSG00000147457.14	ENST00000523091.5	2672	7	-425	1413	-425	0	multi-exon	FALSE	canonical	3	34	junction_5	110.556169735871	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCATTGTAGGACCCTCA	7736	False	NA	NA	False	AGTAAA	-31	NA	23254380	23260587	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_23255433_23256459_23256594_23258032_23258082_23258329_23258450_23258731_23258831_23260143_23260324_23260537
H1_mix_00084183	chr8	+	481	2	FSM	ENSG00000147457.14	ENST00000521656.1	481	2	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCATTGTAGGACCCTCA	NA	False	NA	NA	False	AGTAAA	-31	NA	23259892	23260587	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_23260324_23260537
H1_mix_00084184	chr8	+	944	3	FSM	ENSG00000104679.12	ENST00000521588.4	953	3	9	0	9	0	multi-exon	FALSE	canonical	3	276	junction_1	22	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGATGAGGCTCTTGAGCC	327	False	NA	NA	False	NA	NA	NA	23288430	23290468	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_23288634_23289015_23289154_23289865
H1_mix_00084185	chr8	+	1889	4	FSM	ENSG00000147454.14	ENST00000290075.10	1889	4	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	78.2574100147853	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-16	True	NA	NA	False	AAGAAA	-23	NA	23528955	23572203	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_23529213_23566107_23566814_23568321_23568379_23571334
H1_mix_00084188	chr8	+	789	1	FSM	ENSG00000272157.1	ENST00000607735.1	490	1	-301	2	-301	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCAGTATGTATGGAGAA	128	False	NA	4	True	AATAAA	-17	NA	24956319	24957108	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_24956300_24957100
H1_mix_00084189	chr8	+	509	4	FSM	ENSG00000147459.18	ENST00000410074.5	786	4	0	277	0	-277	multi-exon	FALSE	canonical	1	1	junction_3	6.84754619472471	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTAAGTAGTTATTATAC	22	True	NA	NA	False	AATACA	-11	NA	25184722	25270944	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_25184952_25243673_25243758_25268844_25268886_25270789
H1_mix_00084191	chr8	+	244	2	FSM	ENSG00000147459.18	ENST00000478099.1	288	2	44	0	44	0	multi-exon	FALSE	canonical	3	8	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTTCCTGAAATCATACT	NA	False	NA	NA	False	NA	NA	NA	25308782	25310507	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_25308926_25310406
H1_mix_00084192	chr8	+	369	4	FSM	ENSG00000147459.18	ENST00000481728.2	780	4	338	73	338	-73	multi-exon	FALSE	canonical	2	3	junction_1	2.49443825784929	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGCATGTGACTCACCTA	NA	False	NA	NA	False	NA	NA	NA	25351730	25364704	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_25351827_25358962_25359062_25363046_25363142_25364625
H1_mix_00084194	chr8	+	3539	16	NNC	ENSG00000184661.14	novel	3486	15	NA	NA	-37	-67	at_least_one_novel_splicesite	TRUE	canonical	3	10	junction_3	96.0093513963903	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCATTCTCTGTTCAACCT	161	False	NA	-32	True	NA	NA	NA	25459161	25507806	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_25459474_25460239_25460301_25460383_25460555_25462038_25462209_25466174_25466326_25468216_25468414_25469895_25469981_25472112_25472185_25479912_25480125_25483398_25483487_25483965_25484211_25485758_25485838_25487245_25487335_25488551_25488690_25503372_25503545_25506509
H1_mix_00084195	chr8	+	541	6	FSM	ENSG00000221914.11	ENST00000522535.5	653	6	112	0	-35	0	multi-exon	FALSE	canonical	1	3	junction_1	105.554914617937	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTGAGGCCAGTCCACGA	184	False	NA	NA	False	NA	NA	NA	26291946	26361001	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_26292008_26293665_26293741_26338889_26338988_26354467_26354634_26360168_26360282_26360973
H1_mix_00084197	chr8	+	859	6	FSM	ENSG00000104765.16	ENST00000523515.5	915	6	56	0	19	0	multi-exon	FALSE	canonical	2	4	junction_1	326.604347797147	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTCTTTTCCGCAAATG	15	False	NA	NA	False	NA	NA	NA	26383433	26410666	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_26383479_26391242_26391427_26395229_26395303_26407999_26408104_26408226_26408377_26410363
H1_mix_00084199	chr8	+	270	4	FSM	ENSG00000120899.18	ENST00000461615.1	427	4	157	0	157	0	multi-exon	FALSE	canonical	3	15	junction_2	1.88561808316413	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGGCGGTCCCACCTCTC	1353	False	NA	NA	False	NA	NA	NA	27432259	27434522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_27432362_27433434_27433553_27434092_27434133_27434512
H1_mix_00084200	chr8	+	1560	7	ISM	ENSG00000120899.18	ENST00000517339.5	3914	29	53304	0	-2101	0	3prime_fragment	FALSE	canonical	3	16	junction_2	2.5	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCGGTTTGTTTTGTTTG	6466	False	NA	23	True	ATTAAA	-15	NA	27450755	27459386	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_27450896_27451042_27451079_27451484_27451510_27453113_27453161_27454153_27454292_27454530_27454612_27458293
H1_mix_00084201	chr8	+	254	3	FSM	ENSG00000120899.18	ENST00000482543.1	499	3	245	0	245	0	multi-exon	FALSE	canonical	3	16	junction_1	0.5	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCGTCATCTTCACGGAC	8812	False	NA	NA	False	NA	NA	NA	27453101	27454587	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_27453161_27454153_27454292_27454530
H1_mix_00084204	chr8	+	1904	6	FSM	ENSG00000168077.14	ENST00000337221.8	1910	6	0	6	0	-6	multi-exon	FALSE	canonical	3	12	junction_5	21.0371100676875	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGATTTAAATGTTTATT	-3	True	NA	9	True	AATAAA	-21	NA	27633867	27676770	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_27634208_27649701_27649801_27651507_27651628_27656781_27656881_27658495_27659540_27676568
H1_mix_00084205	chr8	+	3606	2	FSM	ENSG00000171320.15	ENST00000524293.1	3805	2	2	197	2	-197	multi-exon	FALSE	canonical	3	269	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGCAATCTACCCACCTCGG	924	False	NA	NA	False	NA	NA	NA	27775498	27779898	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_27775568_27776361
H1_mix_00084209	chr8	+	2158	16	NIC	ENSG00000134014.17	novel	3148	15	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	10	junction_15	59.5627027220521	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACTTAAGAGTAGTTTAT	-12	True	NA	9	True	AATAAA	-21	NA	28093139	28190093	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_28093234_28097218_28097319_28099827_28099967_28106712_28106784_28107912_28107977_28110369_28110439_28113018_28113174_28129501_28129664_28132277_28132405_28137697_28137892_28155941_28156033_28158567_28158634_28160228_28160457_28161996_28162079_28183193_28183265_28189648
H1_mix_00084212	chr8	+	5392	2	FSM	ENSG00000012232.9	ENST00000523271.1	8257	2	2865	0	-1210	0	multi-exon	FALSE	canonical	3	299	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCAGGTGTGGTGGCAC	NA	False	NA	NA	False	AATACA	-5	NA	28742765	28755599	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_28743215_28750656
H1_mix_00084215	chr8	+	2857	6	FSM	ENSG00000104671.8	ENST00000522141.5	820	6	-293	-1744	-293	1566	multi-exon	FALSE	canonical	2	6	junction_2	135.222187528527	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGTCTCATGTGAATTT	6	False	NA	NA	False	AGTAAA	-25	NA	30156025	30185205	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_30156407_30164110_30164176_30177125_30177215_30179407_30179456_30180487_30180631_30183074
H1_mix_00084219	chr8	+	3538	6	FSM	ENSG00000157110.16	ENST00000517860.5	1076	6	-101	-2361	-101	3	multi-exon	FALSE	canonical	3	1170	junction_1	134.502639379307	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACTGCAGCGTTTTGTTT	81	False	NA	20	True	AATAAA	-31	NA	30384983	30547525	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_30385159_30474778_30474857_30477798_30477838_30479314_30479378_30504285_30504437_30544493
H1_mix_00084226	chr8	+	2325	11	FSM	ENSG00000157168.20	ENST00000523079.5	2359	11	20	14	-5	-14	multi-exon	TRUE	canonical	2	5	junction_7	36.2299599778967	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGGATGCTGCGTCTG	3	True	NA	NA	False	AATAAA	-5	NA	32548229	32760975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_32548827_32595827_32596006_32605561_32605684_32614513_32614565_32616834_32616886_32727948_32728079_32742674_32742734_32754371_32754475_32756402_32756530_32759305_32759437_32760199
H1_mix_00084227	chr8	+	890	9	FSM	ENSG00000198042.11	ENST00000518389.1	872	9	-18	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	117.180349781864	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCCAGGACTGAACATGC	-4	True	NA	NA	False	NA	NA	NA	33485181	33498646	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_33485222_33488377_33488428_33488519_33488630_33488733_33488799_33488987_33489140_33495541_33495617_33496624_33496742_33497231_33497298_33498431
H1_mix_00084230	chr8	+	917	3	NNC	ENSG00000187840.5	novel	827	3	NA	NA	-455	-1	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_1	1703.5	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGGGCCCCGTCTGAGCT	NA	False	NA	21	True	AATAAA	-25	NA	38030078	38060364	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_38030355_38057080_38057261_38059903
H1_mix_00084231	chr8	+	343	1	FSM	ENSG00000272128.1	ENST00000607091.1	461	1	193	-75	193	75	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATCCCAGCACTTTGGG	NA	False	NA	NA	False	AATACA	-26	NA	38099663	38100006	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_38099700_38100000
H1_mix_00084233	chr8	+	530	4	FSM	ENSG00000156735.11	ENST00000521282.1	530	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	120.748590974066	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTCCAGGATATCCGCCTT	21	False	NA	NA	False	NA	NA	NA	38176532	38207741	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_38176590_38177004_38177140_38192687_38192796_38207511
H1_mix_00084237	chr8	+	830	7	FSM	ENSG00000085788.14	ENST00000528504.5	830	7	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	8.76387788342327	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACACCAGAAGAAACTGAAG	NA	False	NA	NA	False	NA	NA	NA	38246183	38253074	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_38246301_38247712_38247836_38249707_38249804_38251911_38252029_38252131_38252288_38252721_38252825_38252956
H1_mix_00084239	chr8	+	1219	1	FSM	ENSG00000272092.1	ENST00000607047.1	1098	1	-76	-45	-76	45	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAGATATCTCTATCTT	NA	False	NA	NA	False	NA	NA	NA	38382287	38383506	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_38382300_38383500
H1_mix_00084240	chr8	+	1736	7	FSM	ENSG00000147526.20	ENST00000522904.5	1724	7	-16	4	-12	-4	multi-exon	TRUE	canonical	3	6	junction_1	9.75961064797157	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAAGCTCTCCTGTTTAG	-10	True	NA	NA	False	NA	NA	NA	38757264	38836287	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_38757410_38788703_38788820_38819521_38820636_38825307_38825369_38827167_38827289_38831124_38831178_38836161
H1_mix_00084243	chr8	+	1708	11	NIC	ENSG00000131203.13	novel	1709	12	NA	NA	-47	0	combination_of_known_splicesites	FALSE	canonical	3	416	junction_8	116.180893437777	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGCATAAGATATATT	NA	False	NA	123	True	AATAAA	-17	NA	39902227	39928426	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_39902449_39913888_39914010_39917874_39917971_39918087_39918208_39918814_39918934_39920099_39920115_39922551_39922652_39923468_39923587_39924720_39924773_39925222_39925372_39927829
H1_mix_00084245	chr8	+	764	7	FSM	ENSG00000147536.12	ENST00000523277.6	3873	7	-22	3131	0	-340	multi-exon	FALSE	canonical	3	91	junction_5	17.0627925290349	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGGCGTGCATCTTTC	2	True	NA	NA	False	AAGAAA	-35	NA	41529226	41541899	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_41529397_41530183_41530299_41536359_41536447_41537179_41537294_41539677_41539776_41539915_41540005_41541808
H1_mix_00084246	chr8	+	1658	2	FSM	ENSG00000287535.1	ENST00000665362.1	1595	2	-47	-16	-47	16	multi-exon	FALSE	canonical	3	11	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGGAGTCTCACCTTGT	NA	False	NA	NA	False	NA	NA	NA	41566810	41568657	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_41566924_41567112
H1_mix_00084247	chr8	+	783	6	FSM	ENSG00000158669.11	ENST00000519853.5	768	6	-15	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	160.23308023002	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAGAGTGTGGCAGTCCA	3	True	NA	NA	False	NA	NA	NA	41578199	41610812	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_41578279_41598291_41598477_41599233_41599305_41609415_41609486_41609654_41609956_41610735
H1_mix_00084248	chr8	+	2198	11	NNC	ENSG00000158669.11	novel	997	6	NA	NA	0	0	intron_retention	TRUE	canonical	1	2	junction_1	168.43304307647	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATAAGACCTCCGATGGTA	171	False	NA	NA	False	NA	NA	NA	41578414	41615048	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_41578581_41596747_41596879_41598291_41599305_41609415_41609486_41609654_41609956_41610735_41610811_41611902_41611993_41612179_41612274_41612844_41612961_41614385_41614442_41614962
H1_mix_00084251	chr8	+	842	3	FSM	ENSG00000158669.11	ENST00000521349.1	842	3	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_1	7	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCCCGTGTGCCAGGGA	8968	False	NA	86	True	NA	NA	NA	41618531	41621373	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_41618813_41618897_41618978_41620892
H1_mix_00084258	chr8	+	2422	21	FSM	ENSG00000104365.16	ENST00000520835.7	2406	21	-16	0	0	0	multi-exon	TRUE	canonical	2	5	junction_1	22.5886586587163	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCAGGCCGCGTGACGTG	-16	True	NA	NA	False	GGGGCT	-5	NA	42271301	42331067	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_42271470_42288633_42288729_42290155_42290274_42293442_42293513_42305186_42305276_42306342_42306433_42308900_42309026_42314321_42314430_42316209_42316340_42316709_42316905_42317656_42317772_42318551_42318676_42319269_42319422_42319584_42319647_42320734_42320845_42321895_42321946_42322053_42322154_42322346_42322495_42325969_42326098_42329123_42329215_42330913
H1_mix_00084269	chr8	+	1133	12	NIC	ENSG00000070501.12	novel	1290	14	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_9	44.5441558252238	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGATGATGATCTTAT	12	False	NA	16	True	AATAAA	-17	NA	42338505	42371808	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_42338686_42344952_42345020_42349015_42349091_42350006_42350066_42352518_42352569_42355515_42355568_42357168_42357224_42357319_42357393_42361294_42361366_42369270_42369336_42369848_42369989_42371562
H1_mix_00084275	chr8	+	1004	8	FSM	ENSG00000168522.13	ENST00000533383.5	982	8	-22	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	204.610032271447	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAAAGGAATATTGGAGA	NA	False	NA	NA	False	AAGAAA	-10	NA	43056307	43085193	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_43056547_43064100_43064216_43069554_43069660_43072180_43072308_43077215_43077365_43083117_43083181_43084709_43084882_43085159
H1_mix_00084281	chr8	+	3157	18	FSM	ENSG00000104738.18	ENST00000649838.1	3157	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	510.55028321949	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCGTCTCTAGTAAAGATAA	-7	True	NA	118	True	NA	NA	NA	47960897	47977089	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_47961015_47961130_47961215_47961515_47961681_47962052_47962217_47962304_47962407_47962763_47962860_47962944_47963041_47964573_47964713_47966186_47966408_47967364_47967486_47969278_47969402_47969797_47970058_47970510_47970877_47971340_47971469_47972856_47973065_47974733_47974963_47975714_47975849_47976685
H1_mix_00084282	chr8	+	4183	16	FSM	ENSG00000104738.18	ENST00000262105.6	4183	16	0	0	0	0	multi-exon	FALSE	canonical	3	1337	junction_10	103.98256264073	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATGAGTTGGGCCTTTT	-14	True	NA	21	True	AATAAA	-21	NA	47960935	47978160	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_47961215_47961515_47961681_47962052_47962217_47962304_47962407_47962763_47962860_47962944_47963041_47964573_47964713_47966186_47966408_47967364_47967486_47969797_47970058_47970510_47970877_47971340_47971469_47972856_47973065_47974733_47974963_47975714_47975849_47976685
H1_mix_00084288	chr8	+	1200	4	NNC	ENSG00000169139.12	novel	4342	4	NA	NA	0	44546	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1826.1676325634	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAATGAACTATGTC	8064	False	NA	NA	False	NA	NA	NA	48043032	48109254	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_48043182_48049852_48049979_48060681_48061566_48109213
H1_mix_00084289	chr8	+	2234	1	FSM	ENSG00000272024.1	ENST00000607201.1	407	1	-1878	51	-1878	-51	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGCCTTATTTTGCCAT	NA	False	NA	NA	False	ACTAAA	-43	NA	51948405	51950639	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_51948400_51950600
H1_mix_00084290	chr8	+	528	1	FSM	ENSG00000271555.1	ENST00000605049.1	239	1	-439	150	-439	-150	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTACAAAATTAAATTCTAA	7711	False	NA	NA	False	AATAAA	-38	NA	52722463	52722991	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_52722500_52723000
H1_mix_00084294	chr8	+	1682	5	FSM	ENSG00000170791.18	ENST00000518801.5	1670	5	-12	0	0	0	multi-exon	FALSE	canonical	3	161	junction_2	212.473968993851	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTGATTTGTATTGAC	-3	True	NA	17	True	AATAAA	-20	NA	56211785	56218619	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_56211838_56212761_56212890_56214597_56214668_56216388_56216532_56217330
H1_mix_00084295	chr8	+	1687	5	NIC	ENSG00000170791.18	novel	1670	5	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	197	junction_3	205.56553091411	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTGATTTGTATTGAC	12	False	NA	17	True	AATAAA	-20	NA	56211800	56218619	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_56211838_56212761_56212910_56214597_56214668_56216388_56216532_56217330
H1_mix_00084296	chr8	+	734	5	FSM	ENSG00000137575.12	ENST00000522843.5	764	5	-8	38	0	-38	multi-exon	FALSE	canonical	3	815	junction_4	125.192601618466	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTGTATAATAGAATTGT	4	True	NA	NA	False	AATACA	-24	NA	58553253	58576328	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_58553304_58565018_58565085_58570886_58570966_58572204_58572315_58575899
H1_mix_00084297	chr8	+	2076	9	FSM	ENSG00000137575.12	ENST00000630925.1	2076	9	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	396.388067428877	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACTGCATCATTTGCTTT	934	False	NA	28	True	AATAAA	-20	NA	58561747	58582859	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_58561796_58565018_58565085_58570886_58570966_58572204_58572315_58575902_58576062_58578032_58578209_58579622_58579795_58580516_58580609_58581685
H1_mix_00084300	chr8	+	1058	7	FSM	ENSG00000104388.15	ENST00000531289.5	1058	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	372.548319013789	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAATTGATGTGATTATT	0	True	NA	59	True	NA	NA	NA	60516935	60620988	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_60517254_60572045_60572114_60584207_60584291_60584722_60584816_60591857_60591970_60618579_60618649_60620673
H1_mix_00084301	chr8	+	588	6	FSM	ENSG00000104388.15	ENST00000429861.5	594	6	0	6	0	-6	multi-exon	FALSE	canonical	3	889	junction_5	96.2567400237511	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTAACATTCACCTTCTG	53	False	NA	NA	False	CATAAA	-29	NA	60517235	60592111	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_60517254_60558851_60558924_60572045_60572114_60584207_60584291_60584722_60584816_60591857
H1_mix_00084302	chr8	+	507	2	FSM	ENSG00000171316.12	ENST00000531695.1	507	2	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAACTCATGTGACTTCT	4702	False	NA	NA	False	NA	NA	NA	60856856	60861378	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_60856889_60860903
H1_mix_00084304	chr8	+	1049	1	FSM	ENSG00000213881.3	ENST00000521088.1	871	1	64	-242	64	242	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTAGTAGCGGTGGTCAGA	NA	False	NA	NA	False	NA	NA	NA	61202413	61203462	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_61202400_61203500
H1_mix_00084305	chr8	+	5388	5	FSM	ENSG00000185728.17	ENST00000621957.4	2387	5	-95	-2906	4	235	multi-exon	FALSE	canonical	3	49	junction_2	177.450521272833	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTAAGTTTAGAACAAAAGA	281	False	NA	NA	False	NA	NA	NA	63168556	63213021	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_63168902_63169386_63169412_63175336_63175417_63186146_63187746_63209682
H1_mix_00084306	chr8	+	4715	1	FSM	ENSG00000254377.7	ENST00000685732.1	982	1	7	-3740	7	166	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAATAGATGCTGCCCGAA	6	False	NA	NA	False	AAAAAG	-45	NA	64379238	64383953	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_64379200_64384000
H1_mix_00084309	chr8	+	526	6	FSM	ENSG00000147576.17	ENST00000443372.5	515	6	-11	0	-1	0	multi-exon	FALSE	canonical	3	14	junction_1	10.5261578935526	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAATCCCATCACACGGC	1	True	NA	NA	False	NA	NA	NA	66432496	66452006	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_66432576_66444366_66444421_66444593_66444749_66447263_66447342_66448864_66448971_66451952
H1_mix_00084310	chr8	+	1915	11	NIC	ENSG00000147576.17	novel	1979	12	NA	NA	-1	-31	intron_retention	FALSE	canonical	3	14	junction_1	7.47261667690776	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCACTTTTCTAATAATAAA	1	True	NA	-20	True	NA	NA	NA	66432496	66468776	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_66432576_66444366_66444421_66444593_66444749_66447263_66447342_66448864_66448971_66451952_66452106_66453709_66454158_66456816_66456896_66457069_66457167_66460307_66460466_66468268
H1_mix_00084313	chr8	+	4247	28	FSM	ENSG00000104218.16	ENST00000675306.2	4291	28	44	0	-2	0	multi-exon	FALSE	canonical	0	0	junction_15	17.0887299515799	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTAATTACTAAAATCT	-25	True	NA	-9	True	AATAAA	-5	NA	67064359	67196246	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_67064539_67074242_67074352_67076481_67076582_67086006_67086111_67093542_67093642_67095292_67095733_67103036_67103136_67105904_67105976_67111971_67112066_67113804_67113863_67115913_67116123_67118247_67118370_67118742_67118822_67131950_67132081_67137455_67137604_67154023_67154137_67158446_67158597_67158990_67159138_67161810_67161916_67163731_67163799_67164390_67164509_67172415_67172556_67175295_67175437_67177679_67177727_67179862_67179927_67190649_67190760_67193463_67193603_67195381
H1_mix_00084314	chr8	+	4337	29	FSM	ENSG00000104218.16	ENST00000678645.1	4121	29	0	-216	0	0	multi-exon	FALSE	canonical	1	14	junction_22	13.796257996061	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTAATTACTAAAATCT	-4	True	NA	-9	True	AATAAA	-5	NA	67064422	67196246	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_67064539_67074242_67074352_67076481_67076582_67086006_67086111_67093542_67093642_67095292_67095733_67103036_67103136_67105904_67105976_67111971_67112066_67113804_67113863_67115913_67116123_67118247_67118370_67118742_67118822_67131950_67132081_67137455_67137604_67149782_67149936_67154023_67154137_67158446_67158597_67158990_67159138_67161810_67161916_67163731_67163799_67164390_67164509_67172415_67172556_67175295_67175437_67177679_67177727_67179862_67179927_67190649_67190760_67193463_67193603_67195381
H1_mix_00084319	chr8	+	248	1	FSM	ENSG00000213003.3	ENST00000519620.1	469	1	-196	417	-196	-417	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGCCCATTGGTGGAA	NA	False	NA	NA	False	AAGAAA	-38	NA	70273172	70273420	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_70273200_70273400
H1_mix_00084320	chr8	+	3952	4	FSM	ENSG00000235531.11	ENST00000655314.1	4276	4	-7	331	-7	-331	multi-exon	FALSE	canonical	0	0	junction_1	2.94392028877595	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTGCATCTATAGGAAAAA	36	False	NA	NA	False	NA	NA	NA	71844031	72055847	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_71844423_71962922_71963049_71965408_71965535_72052538
H1_mix_00084321	chr8	+	3826	3	FSM	ENSG00000235531.11	ENST00000457356.9	4284	3	-7	465	-7	-331	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTGCATCTATAGGAAAAA	36	False	NA	NA	False	NA	NA	NA	71844031	72055847	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_71844423_71962922_71963049_72052538
H1_mix_00084325	chr8	+	2794	9	NIC	ENSG00000147601.15	novel	3268	9	NA	NA	13	-2	combination_of_known_junctions	FALSE	canonical	3	109	junction_5	2721.3169577201	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATCCTATATATAAACAG	12	False	NA	-15	True	NA	NA	NA	73008920	73047709	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026943_73027053_73032041_73032134_73039115_73039220_73045960
H1_mix_00084327	chr8	+	590	1	Genic_Genomic	ENSG00000253636.1	novel	NA	NA	NA	NA	-358	-10652	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGAATTCACCCAAATGC	5543	False	NA	NA	False	NA	NA	NA	73051819	73052409	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr8_+_73051800_73052400
H1_mix_00084328	chr8	+	524	2	FSM	ENSG00000121039.10	ENST00000518870.1	610	2	0	86	0	-86	multi-exon	FALSE	canonical	3	41	junction_1	0	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAACATTTTGAACTAGT	334	False	NA	NA	False	NA	NA	NA	73295515	73297654	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_73295579_73297193
H1_mix_00084329	chr8	+	3577	5	FSM	ENSG00000104381.14	ENST00000675821.1	3606	5	29	0	20	0	multi-exon	FALSE	canonical	1	1	junction_1	90.3410205831216	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATGAACCCTAAAACAAAG	NA	False	NA	-6	True	AATAAA	-17	NA	74320641	74366857	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_74320962_74360136_74360311_74361883_74361979_74362938_74363054_74363984
H1_mix_00084331	chr8	+	3461	5	FSM	ENSG00000104381.14	ENST00000675928.1	2378	5	5	-1088	0	0	multi-exon	FALSE	canonical	2	8	junction_2	87.086164228309	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCCTAAAACAAAGTACTCA	-27	True	NA	0	True	AATAAA	-23	NA	74350399	74366863	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_74350579_74351273_74351467_74361883_74361979_74362938_74363054_74363984
H1_mix_00084335	chr8	+	392	1	FSM	ENSG00000253677.1	ENST00000517466.1	360	1	36	-68	36	68	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATATTTAAACACAGCAAT	51	False	NA	NA	False	NA	NA	NA	81254905	81255297	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_81254900_81255300
H1_mix_00084336	chr8	+	2408	15	FSM	ENSG00000133739.16	ENST00000517875.5	2385	15	-23	0	0	0	multi-exon	TRUE	canonical	3	34	junction_5	15.175167685588	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGATCACAGAAATAGAA	-5	True	NA	18	True	AAAAAG	-25	NA	85107214	85138074	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_85107400_85110114_85110181_85112931_85113100_85115099_85115276_85115374_85115585_85123412_85123607_85124791_85124940_85126688_85126838_85129174_85129380_85129918_85130059_85131759_85131962_85134846_85135033_85135788_85135964_85137463_85137628_85138034
H1_mix_00084341	chr8	+	700	4	FSM	ENSG00000185015.8	ENST00000522631.1	700	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	1.69967317119759	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTCTGTGACATAGGAGG	57	False	NA	NA	False	AATACA	-1	NA	85220926	85230336	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_85221126_85224954_85225296_85230084_85230201_85230292
H1_mix_00084343	chr8	+	683	4	FSM	ENSG00000104267.10	ENST00000520996.5	684	4	0	1	0	-1	multi-exon	FALSE	canonical	3	216	junction_3	12.0277457017791	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGGAGATGGAGGGCAGAA	-3	True	NA	NA	False	NA	NA	NA	85464002	85474576	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_85464116_85465271_85465470_85473692_85473812_85474323
H1_mix_00084344	chr8	+	603	6	FSM	ENSG00000085719.13	ENST00000621245.4	581	6	-22	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	102.290957567128	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTCTTGTTTGAAATGGAA	-13	True	NA	NA	False	AATAAA	-12	NA	86514436	86532539	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_86514574_86515461_86515500_86528535_86528678_86528944_86529125_86531154_86531230_86532508
H1_mix_00084347	chr8	+	579	5	FSM	ENSG00000253553.8	ENST00000521433.1	579	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6.97764286847643	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCAATATTTCCCAAGTC	5	True	NA	NA	False	NA	NA	NA	88327843	88709540	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_88327899_88328928_88329053_88542679_88542811_88700291_88700350_88709329
H1_mix_00084350	chr8	+	665	2	FSM	ENSG00000104325.7	ENST00000522583.1	651	2	-14	0	-14	0	multi-exon	FALSE	canonical	3	343	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACATTAAAAATCAGTTAT	3296	False	NA	NA	False	NA	NA	NA	90016719	90018966	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_90017327_90018908
H1_mix_00084356	chr8	+	407	2	FSM	ENSG00000164953.17	ENST00000481620.1	1579	2	-42	1214	5	-1214	multi-exon	FALSE	canonical	3	81	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATCTTTATTTTTCAAAA	1	True	NA	NA	False	AAAAAG	-11	NA	93754869	93755916	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_93755138_93755777
H1_mix_00084358	chr8	+	3285	28	FSM	ENSG00000164953.17	ENST00000409623.8	3285	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	19.7221439748057	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATAAACTGAGAGCTGC	-9	True	NA	21	True	ATTAAA	-31	NA	93754898	93816778	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_93755138_93755777_93755867_93758482_93758577_93763841_93763942_93765405_93765476_93765571_93765647_93772588_93772652_93780592_93780748_93780873_93780983_93781657_93781745_93782394_93782461_93785221_93785379_93786267_93786347_93787843_93787950_93791262_93791320_93793197_93793297_93795408_93795508_93795900_93795988_93797133_93797234_93797330_93797471_93799617_93799759_93803603_93803685_93804761_93804879_93808839_93808957_93809056_93809162_93809784_93809888_93815304_93815448_93816371
H1_mix_00084360	chr8	+	485	6	FSM	ENSG00000164941.14	ENST00000521860.5	548	6	63	0	-14	0	multi-exon	FALSE	canonical	3	14	junction_1	121.74235088908	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATTCTATTTTGGTACTA	-16	True	NA	NA	False	NA	NA	NA	94823272	94832007	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_94823302_94824892_94825068_94827262_94827404_94827721_94827794_94828974_94829027_94831991
H1_mix_00084363	chr8	+	2809	16	FSM	ENSG00000164941.14	ENST00000523321.5	2916	16	0	107	0	-107	multi-exon	FALSE	canonical	3	261	junction_11	26.7202794396566	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTAAGTAGTGGGTTTTT	18	True	NA	NA	False	NA	NA	NA	94823306	94860240	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_94823562_94824892_94825068_94827262_94827404_94827721_94827794_94828974_94829027_94831991_94832175_94836523_94836632_94838462_94838619_94841490_94841592_94842346_94842489_94849461_94849533_94849915_94850092_94851552_94851687_94853804_94853916_94856776_94856979_94859510
H1_mix_00084365	chr8	+	2482	22	FSM	ENSG00000164941.14	ENST00000520526.5	2482	22	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_18	74.416856159916	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATGTACACAATTAGTGG	5660	False	NA	13	True	AATAAA	-30	NA	94828991	94880314	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_94829027_94831991_94832175_94836523_94836632_94838462_94838619_94841490_94841592_94842346_94842489_94849461_94849533_94849915_94850092_94851552_94851687_94853804_94853916_94856776_94856979_94859510_94859633_94865505_94865691_94866157_94866192_94867139_94867197_94867275_94867338_94871883_94872003_94873373_94873478_94876073_94876148_94876220_94876286_94876445_94876490_94880117
H1_mix_00084368	chr8	+	614	1	FSM	ENSG00000272509.1	ENST00000605911.1	462	1	-218	66	-218	-66	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATATACACTAAAACCTG	NA	False	NA	NA	False	NA	NA	NA	94884390	94885004	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_94884400_94885000
H1_mix_00084371	chr8	+	1211	10	FSM	ENSG00000156170.13	ENST00000517976.5	1196	10	-15	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	91.8341231397105	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCATTGATGTTAATTCT	4	True	NA	7	True	ATTAAA	-9	NA	95025005	95057946	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_95025206_95031994_95032099_95035453_95035577_95036301_95036495_95041569_95041627_95045544_95045648_95046993_95047128_95048456_95048559_95052173_95052231_95057808
H1_mix_00084373	chr8	+	1716	7	ISM	ENSG00000104324.16	ENST00000220763.10	1932	8	139625	52	23627	-52	3prime_fragment	FALSE	canonical	2	11	junction_5	1.34370962471642	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTTTCCACTTTAAAAGT	NA	False	NA	-38	True	NA	NA	NA	96784866	97143449	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_96785331_96834972_96835181_96879797_96880006_96965934_96966047_97029402_97029495_97066008_97066211_97143019
H1_mix_00084376	chr8	+	618	5	FSM	ENSG00000104341.17	ENST00000517924.5	618	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	2992.16563503761	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCATGTCAGTGAATCCT	11	False	NA	NA	False	NA	NA	NA	97775848	97819164	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_97776109_97805352_97805465_97815303_97815402_97816057_97816181_97819139
H1_mix_00084377	chr8	+	3437	19	FSM	ENSG00000132561.14	ENST00000521689.5	3554	19	117	0	-107	0	multi-exon	FALSE	canonical	3	52	junction_12	10.8063767182982	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGACACAACTTGCTTCTG	3929	False	NA	NA	False	AATATA	-3	NA	97868956	98035978	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_97869288_97888074_97888243_97930952_97931523_97941776_97941900_97961407_97961531_97978885_97979009_97994479_97994603_98003660_98003784_98007104_98007228_98007478_98007602_98016539_98016663_98017993_98018117_98021204_98021328_98027415_98027830_98030461_98030615_98032245_98032318_98033098_98033177_98033560_98033660_98035656
H1_mix_00084380	chr8	+	3187	21	FSM	ENSG00000132549.20	ENST00000683869.1	3800	21	-24	637	0	-637	multi-exon	FALSE	canonical	2	8	junction_19	5.30919014539883	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTGTCAAGTACTGTAA	-13	True	NA	NA	False	AAAACA	-14	NA	99013271	99391704	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_99013348_99013759_99013936_99038422_99038567_99096311_99096433_99102952_99103121_99111097_99111280_99115699_99115875_99121176_99121446_99134631_99134728_99135014_99135138_99135595_99135734_99136664_99136753_99142973_99143166_99147840_99148011_99156548_99156744_99170038_99170164_99192875_99193058_99274197_99274333_99275080_99275255_99384207_99384318_99391556
H1_mix_00084381	chr8	+	3511	23	FSM	ENSG00000132549.20	ENST00000683486.1	3712	23	0	201	0	-201	multi-exon	FALSE	canonical	2	8	junction_19	5.93090379577268	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATATGTTAACATTTTTTT	26	True	NA	NA	False	NA	NA	NA	99013310	99442635	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_99013348_99013759_99013936_99038422_99038567_99096311_99096433_99102952_99103121_99111097_99111280_99115699_99115875_99121176_99121446_99134631_99134728_99135014_99135138_99135595_99135734_99136664_99136753_99142973_99143166_99147840_99148011_99156548_99156744_99170038_99170164_99192875_99193058_99274197_99274333_99275080_99275255_99384207_99384318_99391556_99391705_99431536_99431665_99442400
H1_mix_00084383	chr8	+	3484	3	FSM	ENSG00000132549.20	ENST00000493587.1	3485	3	0	1	0	-1	multi-exon	FALSE	canonical	3	30	junction_2	5.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTTGAATAAGTGTCATT	NA	False	NA	NA	False	AATAAA	-16	NA	99868056	99877579	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_99868466_99870784_99871698_99875417
H1_mix_00084385	chr8	+	1485	3	ISM	ENSG00000104450.13	ENST00000388798.7	3695	19	80674	42	-1298	-41	3prime_fragment	FALSE	canonical	3	13	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTGTTGACTGGGTCAA	NA	False	NA	NA	False	NA	NA	NA	100239260	100241862	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_100239405_100240402_100240772_100240890
H1_mix_00084388	chr8	+	504	2	FSM	ENSG00000253320.7	ENST00000524007.1	504	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAGCGACCTTCCTGTG	-4	True	NA	NA	False	AATAAA	-18	NA	102864336	102865319	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_102864624_102865102
H1_mix_00084390	chr8	+	727	3	NIC	ENSG00000253320.7	novel	756	4	NA	NA	33	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	3.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATGTATCAATATTTAAT	NA	False	NA	11	True	ATTAAA	-20	NA	102930214	102977876	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_102930519_102941920_102942054_102977586
H1_mix_00084393	chr8	+	3048	1	FSM	ENSG00000207399.1	ENST00000384668.1	107	1	-753	-2188	-753	2188	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	103384207	103387255	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_103384200_103387300
H1_mix_00084394	chr8	+	4640	21	NIC	ENSG00000176406.23	novel	7564	31	NA	NA	-159	80451	combination_of_known_splicesites	FALSE	canonical	2	10	junction_20	5.68748626371968	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTGAAAATTCTTTACC	0	True	NA	11	True	AATAAA	-16	NA	103500536	104095066	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_103501063_103697085_103697297_103766226_103766538_103885297_103886224_103910320_103910530_103912052_103912173_103915494_103915595_103916413_103916538_103918440_103918488_103921671_103921785_103931262_103931394_103936550_103936723_103942772_103942927_103961064_103961134_103975349_103975507_103989304_103989422_104013441_104013622_104014505_104014616_104068511_104068613_104093470_104093644_104094477
H1_mix_00084396	chr8	+	3794	6	FSM	ENSG00000176406.23	ENST00000339750.3	3780	6	-14	0	-14	0	multi-exon	FALSE	canonical	2	6	junction_1	8.91291198206288	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCGTCTGCAGTGCTTTC	141	False	NA	5	True	AATAAA	-13	NA	104223320	104254425	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_104223794_104244915_104245058_104248700_104248814_104249486_104249589_104251023_104251164_104251601
H1_mix_00084397	chr8	+	1015	2	NNC	ENSG00000164830.19	novel	1148	2	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	0	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGGCTTTTATGGCTAT	-44	True	NA	15	True	AATAAA	-17	NA	106270169	106272774	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_106270368_106271957
H1_mix_00084406	chr8	+	825	2	FSM	ENSG00000254339.6	ENST00000688569.1	609	2	-220	4	-179	-4	multi-exon	FALSE	canonical	3	110	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCTGGGTGCTAGGTGT	NA	False	NA	NA	False	AATAAA	-10	NA	114281857	114304801	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_114282295_114304413
H1_mix_00084407	chr8	+	17779	3	NIC	ENSG00000254339.6	novel	836	3	NA	NA	-179	-4	combination_of_known_junctions	FALSE	canonical	3	268	junction_2	22	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCTGGGTGCTAGGTGT	NA	False	NA	NA	False	AATAAA	-10	NA	114281857	114304801	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_114282295_114284252_114284515_114287721
H1_mix_00084410	chr8	+	476	3	FSM	ENSG00000164758.7	ENST00000522839.1	476	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	117.5	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGATATTTAAATTTCCTG	10	True	NA	NA	False	TATAAA	-26	NA	117520832	117539978	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_117521054_117528650_117528810_117539882
H1_mix_00084412	chr8	+	1974	4	FSM	ENSG00000172167.8	ENST00000522308.1	1981	4	-19	26	3	-26	multi-exon	FALSE	canonical	3	76	junction_1	7.1336448530109	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCGACAGAGCAACACTC	-15	True	NA	NA	False	NA	NA	NA	120445402	120452803	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_120445589_120446432_120446514_120451002_120451077_120451170
H1_mix_00084414	chr8	+	2991	20	FSM	ENSG00000156787.17	ENST00000327098.9	2985	20	-6	0	0	0	multi-exon	FALSE	canonical	3	14	junction_17	62.7651384438696	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACGGTCGAGAGAGAGAC	-12	True	NA	NA	False	NA	NA	NA	123072706	123151954	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_123072847_123077110_123077258_123082701_123082818_123084161_123084341_123093590_123093743_123097281_123097442_123100806_123101008_123105287_123105465_123109316_123109397_123109473_123109621_123120054_123120189_123126055_123126190_123126507_123126688_123128280_123128514_123129065_123129219_123130197_123130334_123140760_123140902_123144716_123144856_123150035_123150129_123151805
H1_mix_00084416	chr8	+	3223	21	Fusion	ENSG00000156787.17_ENSG00000287657.1	novel	3478	22	NA	NA	0	0	multi-exon	FALSE	canonical	2	2	junction_20	59.3340332355723	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGCTGTAGCATTTTTG	-6	True	NA	NA	False	AATAAA	-19	NA	123072712	123165173	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr8_+_123072847_123077110_123077258_123082701_123082818_123084161_123084341_123093590_123093743_123097281_123097442_123100806_123101008_123105287_123105465_123109316_123109397_123109473_123109621_123120054_123120189_123126055_123126190_123126507_123126688_123128280_123128514_123129065_123129219_123130197_123130334_123134113_123134207_123140760_123140902_123142261_123142457_123144716_123144856_123164981
H1_mix_00084422	chr8	+	2720	23	FSM	ENSG00000176853.16	ENST00000521166.5	2706	23	-14	0	3	0	multi-exon	FALSE	canonical	3	94	junction_14	11.2073802425378	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACATTGAGATTCAAGAA	-37	True	NA	NA	False	AATAAA	-23	NA	123768441	123810479	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_123768775_123774079_123774165_123775146_123775299_123777264_123777323_123778024_123778093_123778658_123778773_123779984_123780076_123780479_123780543_123784469_123784577_123785080_123785120_123785628_123785742_123786494_123786611_123787260_123787374_123787663_123787751_123789612_123789746_123798089_123798239_123799519_123799655_123799771_123799886_123805266_123805340_123806079_123806230_123808271_123808377_123808892_123809017_123810281
H1_mix_00084423	chr8	+	5650	25	NNC	ENSG00000176853.16	novel	5529	24	NA	NA	-6	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	33.6042893674139	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAAATGTGTTTAATTTT	-29	True	NA	26	True	AATAAA	-23	NA	123768449	123815445	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_123768775_123772893_123773033_123774079_123774165_123775146_123775299_123777264_123777323_123778024_123778093_123778658_123778773_123779984_123780076_123780479_123780543_123784469_123784577_123785080_123785120_123785628_123785742_123786494_123786611_123787260_123787374_123787663_123787751_123789612_123789746_123798089_123798239_123799519_123799655_123799771_123799886_123805266_123805340_123806079_123806230_123808271_123808377_123808892_123809017_123810281_123810352_123812518
H1_mix_00084431	chr8	+	219	1	FSM	ENSG00000282961.1	ENST00000635449.1	12727	1	6404	6104	6404	-6104	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTGTCCTTCTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	127086277	127086496	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_127086300_127086500
H1_mix_00084432	chr8	+	281	1	FSM	ENSG00000282961.1	ENST00000635449.1	12727	1	7669	4777	7669	-4777	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGACACTTTTATGGTTCC	NA	False	NA	NA	False	AAAAAG	-15	NA	127087542	127087823	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_127087500_127087800
H1_mix_00084434	chr8	+	1932	3	FSM	ENSG00000136997.21	ENST00000259523.10	2042	3	110	0	25	0	multi-exon	FALSE	canonical	1	3	junction_2	115	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACCTTCTGCTGGAGGCC	11	True	NA	NA	False	NA	NA	NA	127735543	127740477	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_127736624_127738247_127739020_127740397
H1_mix_00084435	chr8	+	2395	9	FSM	ENSG00000249859.13	ENST00000667305.1	1701	9	-698	4	-698	0	multi-exon	FALSE	canonical	3	25	junction_6	30.5122926047847	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATGCCGTGGTCTTTCTT	NA	False	NA	34	True	ATTAAA	-14	NA	127793827	128101252	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_127794735_127890588_127890999_127939507_127939677_127989161_127989292_128009589_128009719_128010317_128010445_128070159_128070273_128096517_128096655_128100979
H1_mix_00084436	chr8	+	2026	6	FSM	ENSG00000249859.13	ENST00000670223.1	1321	6	-709	4	-698	0	multi-exon	FALSE	canonical	2	19	junction_4	32.9581552881832	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATGCCGTGGTCTTTCTT	NA	False	NA	34	True	ATTAAA	-14	NA	127793827	128101252	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_127794735_127890588_127890999_127939507_127939677_127989161_127989292_128096517_128096655_128100979
H1_mix_00084438	chr8	+	1588	8	FSM	ENSG00000249859.13	ENST00000657289.1	1581	8	-7	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	35.26112503559	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCTTTCTTTATG	-13	True	NA	38	True	ATTAAA	-18	NA	127794525	128101256	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_127794735_127890588_127890999_127939507_127939677_127989161_127989292_128009589_128009719_128010317_128010445_128096517_128096655_128100979
H1_mix_00084441	chr8	+	1414	7	FSM	ENSG00000249859.13	ENST00000665737.1	1410	7	-4	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	25.9914515861572	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCGTGGTCTTTCTTTA	16	True	NA	36	True	ATTAAA	-16	NA	127794554	128101254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_127794735_127890588_127890999_127939507_127939677_127989161_127989292_128070159_128070273_128096517_128096655_128100979
H1_mix_00084455	chr8	+	3291	2	FSM	ENSG00000286535.1	ENST00000665729.1	3369	2	21	57	21	-57	multi-exon	FALSE	canonical	1	1	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCTTAAAACTCTACTT	NA	False	NA	NA	False	NA	NA	NA	130358807	130362404	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_130358926_130359231
H1_mix_00084456	chr8	+	1418	3	NNC	ENSG00000253507.6	novel	731	4	NA	NA	0	-974	at_least_one_novel_splicesite	FALSE	canonical	3	142	junction_2	499.5	524	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGCTCAGCCTGAACGT	7	False	NA	NA	False	NA	NA	NA	131310471	131316532	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_131310713_131312555_131312749_131315548
H1_mix_00084458	chr8	+	5099	19	NNC	ENSG00000132294.15	novel	770	6	NA	NA	13098	-115	at_least_one_novel_splicesite	TRUE	canonical	3	41	junction_1	60.1420130058436	25	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTGTGCAATTCATATG	NA	False	NA	26	True	AATAAA	-23	NA	131952998	132013527	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_131953488_131953817_131953968_131955767_131955906_131959584_131959664_131968294_131968431_131970475_131970644_131976026_131976142_131977040_131977093_131978846_131979020_131979345_131979422_131984138_131984301_131984928_131985061_131986193_131986262_131987574_131987703_131996405_131996498_132001758_132001808_132002602_132002707_132003235_132003286_132010789
H1_mix_00084460	chr8	+	3014	8	NIC	ENSG00000129292.21	novel	2236	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_6	41.419210765153	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAATGGCTCTAATTACT	196	False	NA	3	True	AATAAA	-14	NA	132775579	132813188	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_132775646_132777795_132777912_132794409_132794582_132794732_132794818_132798771_132798861_132803818_132804033_132804611_132804741_132811045
H1_mix_00084472	chr8	+	1430	5	FSM	ENSG00000160932.11	ENST00000520466.5	1419	5	-11	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	1794.64961761342	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTGCTCTGAGTGTGG	0	True	NA	14	True	AATAAA	-16	NA	143018516	143022409	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_143018587_143018832_143019120_143020882_143020992_143021313_143021434_143021565
H1_mix_00084474	chr8	+	1083	4	FSM	ENSG00000160932.11	ENST00000521182.5	1079	4	-4	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	1480.84998114821	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTGCTCTGAGTGTGG	25	False	NA	14	True	AATAAA	-16	NA	143018541	143022409	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_143018587_143020882_143020992_143021348_143021434_143021565
H1_mix_00084475	chr8	+	438	4	FSM	ENSG00000160932.11	ENST00000523847.5	427	4	-11	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	1600.09090019564	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAACTTGCGCTTCCATCT	25	False	NA	9	True	NA	NA	NA	143018541	143023832	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_143018587_143020882_143020992_143021313_143021434_143023668
H1_mix_00084476	chr8	+	1141	5	NNC	ENSG00000160932.11	novel	1419	5	NA	NA	0	63546	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1520.75458243597	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAAAGCCCTAATGGAG	25	False	NA	NA	False	NA	NA	NA	143018541	143087378	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_143018587_143020882_143020992_143021313_143021434_143021565_143022407_143087352
H1_mix_00084477	chr8	+	1270	6	FSM	ENSG00000177335.12	ENST00000523099.6	1255	6	-15	0	10	0	multi-exon	FALSE	canonical	2	10	junction_1	13.6088206689632	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTTTCCATGACTACCA	-1	True	NA	19	True	ATTAAA	-16	NA	143039218	143053444	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_143039570_143042957_143043263_143044648_143044818_143047678_143047815_143049208_143049299_143053225
H1_mix_00084478	chr8	+	1006	6	NNC	ENSG00000177335.12	novel	1255	6	NA	NA	127	670	intron_retention	FALSE	canonical	2	10	junction_1	15.587174214719	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCATCTTCTGTAGCAGA	130	False	NA	50	True	TATAAA	-33	NA	143039454	143049922	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_143039570_143042957_143043263_143044648_143044818_143047678_143047815_143049208_143049299_143049731
H1_mix_00084479	chr8	+	4794	3	FSM	ENSG00000181638.20	ENST00000330701.7	4786	3	-8	0	0	0	multi-exon	TRUE	canonical	2	8	junction_1	3	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGTCTTCATTGAGCTC	-16	True	NA	17	True	AGTAAA	-19	NA	143246930	143262705	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_143247143_143249689_143251341_143259774
H1_mix_00084486	chr8	+	2333	1	FSM	ENSG00000250571.7	ENST00000523812.1	2333	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGAGCCGGCACCTGCCT	58	False	NA	20	True	AATAAA	-20	NA	143274598	143276931	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_143274600_143276900
H1_mix_00084490	chr8	+	2213	9	FSM	ENSG00000104518.11	ENST00000531184.5	2213	9	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_3	25.9422435421457	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAAGGCTGGTAGCAGA	-25	True	NA	6	True	AATAAA	-12	NA	143558337	143563055	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_143558452_143559331_143559970_143560602_143560772_143561001_143561424_143561741_143561829_143561958_143562132_143562208_143562351_143562447_143562522_143562661
H1_mix_00084491	chr8	+	1643	6	FSM	ENSG00000104518.11	ENST00000526469.5	1643	6	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_5	17.4882817909593	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACACAATAAAGGTGGCAT	2227	False	NA	-17	True	NA	NA	NA	143560627	143563032	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_143561424_143561741_143561829_143561958_143562132_143562208_143562351_143562447_143562522_143562661
H1_mix_00084492	chr8	+	480	4	FSM	ENSG00000104518.11	ENST00000534602.5	480	4	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_3	7.84573486395988	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGCAGGTGGCGGGTGG	2957	False	NA	NA	False	NA	NA	NA	143561357	143562362	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_143561424_143561741_143561829_143561958_143562132_143562208
H1_mix_00084496	chr8	+	834	8	FSM	ENSG00000181085.15	ENST00000395107.8	834	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	6.93703459553085	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGGCACTTCGGTGAGG	23	True	NA	NA	False	NA	NA	NA	143716377	143720291	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_143716444_143717693_143717793_143718046_143718077_143718211_143718303_143718723_143718906_143718992_143719157_143719342_143719483_143720229
H1_mix_00084497	chr8	+	2450	12	NIC	ENSG00000181085.15	novel	1871	14	NA	NA	0	-1	intron_retention	FALSE	canonical	1	4	junction_6	6.71989767730048	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTAAGCAGCCATCGTTCC	23	True	NA	12	True	AATAAA	-17	NA	143716377	143722457	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_143716444_143717693_143717793_143718046_143718077_143718211_143718303_143718774_143718906_143718992_143719157_143719342_143719483_143720229_143720841_143720999_143721106_143721230_143721412_143721548_143721674_143721751
H1_mix_00084512	chr8	+	786	5	FSM	ENSG00000185122.11	ENST00000528988.1	775	5	-14	3	0	-3	multi-exon	FALSE	canonical	2	3	junction_3	417.554188100179	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGCCGGCCCTGCACC	-9	True	NA	NA	False	NA	NA	NA	144291590	144309591	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144291875_144292482_144292620_144293461_144293581_144308905_144309015_144309454
H1_mix_00084515	chr8	+	2336	8	FSM	ENSG00000185122.11	ENST00000527328.5	2336	8	0	0	0	0	multi-exon	FALSE	canonical	3	650	junction_5	110.76210948677	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTATGGCCTCCATGTGT	1316	False	NA	16	True	TATAAA	-13	NA	144310398	144314716	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144311250_144311320_144311383_144311504_144311602_144311699_144311837_144311962_144312245_144313510_144313617_144313845_144314055_144314124
H1_mix_00084519	chr8	+	2038	14	FSM	ENSG00000173137.12	ENST00000529654.5	2027	14	-11	0	-7	0	multi-exon	FALSE	canonical	3	13	junction_4	18.6068003093353	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTCCTTGTGTTTTGT	-21	True	NA	NA	False	NA	NA	NA	144374034	144393242	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144374108_144379386_144379491_144383080_144383231_144390670_144390747_144390860_144391057_144391133_144391275_144391360_144391475_144391579_144391867_144391940_144392023_144392091_144392171_144392253_144392346_144392444_144392698_144392775_144392893_144392968
H1_mix_00084526	chr8	+	3296	11	NIC	ENSG00000160972.10	novel	2722	11	NA	NA	71	0	intron_retention	FALSE	canonical	2	12	junction_1	42.6187752053012	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCGTTGTGTGTTGTGT	137	False	NA	11	True	GATAAA	-18	NA	144478168	144502120	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_144478523_144490033_144490213_144496460_144497454_144498769_144498841_144498915_144499062_144500095_144500200_144500266_144500392_144500486_144500613_144500685_144500762_144500841_144500972_144501128
H1_mix_00084527	chr8	+	807	2	FSM	ENSG00000160972.10	ENST00000528430.2	807	2	0	0	0	0	multi-exon	TRUE	canonical	3	193	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCGTTGTGTGTTGTGT	4630	False	NA	11	True	GATAAA	-18	NA	144501088	144502120	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144501295_144501519
H1_mix_00084528	chr8	+	1443	3	FSM	ENSG00000167700.9	ENST00000528047.5	1433	3	-10	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	240.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAATAAAGCCACATGTGC	-11	True	NA	0	True	NA	NA	NA	144509069	144511181	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144510016_144510597_144510904_144510990
H1_mix_00084530	chr8	+	2109	4	FSM	ENSG00000147789.16	ENST00000544249.2	2125	4	16	0	16	0	multi-exon	FALSE	canonical	3	10	junction_2	38.0555150040335	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTATATGGAATCGTT	-28	True	NA	23	True	AATAAA	-19	NA	144827533	144843222	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144827610_144829042_144829091_144837390_144837508_144841354
H1_mix_00084534	chr8	-	557	1	FSM	ENSG00000223508.5	ENST00000521854.1	457	1	30	-130	30	65	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTATAATATTAGCTTA	NA	False	NA	NA	False	NA	NA	NA	213677	213120	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_213100_213700
H1_mix_00084535	chr8	-	726	1	FSM	ENSG00000272240.1	ENST00000606572.1	541	1	-307	122	-307	-122	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTCTTTCTTTACCACAA	NA	False	NA	NA	False	NA	NA	NA	235194	234468	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_234500_235200
H1_mix_00084536	chr8	-	1987	7	NNC	ENSG00000104714.14	novel	1798	6	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_2	109.776540703781	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGAATATAGTTGAGTTT	-12	True	NA	-55	True	ATTAAA	-18	NA	731215	664199	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_664677_668597_668793_672006_672205_673288_674048_692477_692613_715860_716008_731139
H1_mix_00084538	chr8	-	3170	2	FSM	ENSG00000104714.14	ENST00000522893.1	3170	2	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCATTTTCACACGTTGT	259	False	NA	NA	False	AATAAA	-18	NA	673657	665991	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_668793_673288
H1_mix_00084539	chr8	-	595	3	NNC	ENSG00000253982.3	novel	2199	2	NA	NA	36	41	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	132	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGCTATAGTCATGCTTA	1528	False	NA	NA	False	NA	NA	NA	1763297	1761012	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_1761040_1762635_1762929_1763022
H1_mix_00084540	chr8	-	2008	1	FSM	ENSG00000246089.4	ENST00000688594.1	1173	1	-259	-576	-259	576	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTCTTTTTGCTGCCAG	284	False	NA	80	True	NA	NA	NA	6406837	6404829	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_6404800_6406800
H1_mix_00084541	chr8	-	902	3	NIC	ENSG00000246089.4	novel	1017	3	NA	NA	31	491	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	10	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCATTTCCTTTGTGCTTA	10	True	NA	-5	True	ATTAAA	-19	NA	6407111	6404914	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_6405121_6405705_6406372_6407081
H1_mix_00084542	chr8	-	728	2	Genic_Genomic	ENSG00000284614.1	novel	218	1	NA	NA	-214	6158	multi-exon	FALSE	canonical	3	24	junction_1	0	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAGAATTCTGAATTTT	NA	False	NA	NA	False	AATAAA	-10	NA	7222144	7215554	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr8_-_7215851_7221712
H1_mix_00084543	chr8	-	716	2	Antisense	novelGene_ENSG00000284617.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTTAAAAATGTAAACACC	NA	False	NA	NA	False	NA	NA	NA	7615845	7609000	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr8_-_7609649_7615777
H1_mix_00084544	chr8	-	1095	3	Genic_Genomic	ENSG00000284698.1	novel	221	1	NA	NA	-6	7978	multi-exon	TRUE	canonical	0	0	junction_1	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTTATGGTGGTGTGTG	103	False	NA	NA	False	NA	NA	NA	7686649	7678444	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr8_-_7679061_7686057_7686310_7686422
H1_mix_00084546	chr8	-	1630	2	Intergenic	novelGene_1426	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	63	junction_1	0	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTCATACAACATGTAGT	NA	False	NA	NA	False	AATGAA	-44	NA	7908938	7902108	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_-_7903507_7908706
H1_mix_00084547	chr8	-	315	3	Intergenic	novelGene_1430	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	40	junction_2	57	157	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGGTTTTGTCAAAACGA	1315	False	NA	NA	False	NA	NA	NA	8142980	8101155	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_-_8101219_8134651_8134741_8142817
H1_mix_00084548	chr8	-	1141	1	FSM	ENSG00000268955.2	ENST00000594215.2	661	1	-541	61	-541	-61	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATATCGCATGATCAGTA	NA	False	NA	NA	False	NA	NA	NA	8189736	8188595	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_8188600_8189700
H1_mix_00084549	chr8	-	5013	6	NNC	ENSG00000275342.5	novel	4845	6	NA	NA	498	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	8.79545337091841	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAGCTCTTTATCCTTAA	697	False	NA	-18	True	ATTAAA	-23	NA	8385941	8317735	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_8319303_8327709_8328462_8339477_8339636_8376246_8378079_8381417_8381835_8385654
H1_mix_00084550	chr8	-	1705	3	NNC	ENSG00000253252.2	novel	328	2	NA	NA	-880	26807	intron_retention	FALSE	canonical	3	50	junction_1	24	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACACCCAAGAATTATCAAT	0	True	NA	NA	False	NA	NA	NA	9183399	9153443	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_9155059_9182463_9182516_9183361
H1_mix_00084552	chr8	-	337	1	FSM	ENSG00000253697.1	ENST00000520383.1	144	1	113	-306	113	306	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGCGCCTCTGCCCGGCCG	NA	False	NA	NA	False	NA	NA	NA	9658325	9657988	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_9658000_9658300
H1_mix_00084553	chr8	-	3258	3	FSM	ENSG00000253230.10	ENST00000519461.2	3001	3	1	-258	0	65	multi-exon	FALSE	canonical	3	30	junction_1	45.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGCCTTATTGAGGGCAA	4888	False	NA	-62	True	NA	NA	NA	9903397	9899805	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_9900287_9900544_9900613_9900688
H1_mix_00084554	chr8	-	3335	2	FSM	ENSG00000253230.10	ENST00000669913.1	3064	2	0	-271	0	65	multi-exon	FALSE	canonical	3	30	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGCCTTATTGAGGGCAA	4887	False	NA	-62	True	NA	NA	NA	9903398	9899805	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_9900287_9900544
H1_mix_00084555	chr8	-	3210	2	FSM	ENSG00000171056.8	ENST00000304501.2	3215	2	0	5	0	-5	multi-exon	FALSE	canonical	3	4	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGACTGTTCTATCTTTTG	-1	True	NA	NA	False	AATAAA	-12	NA	10730511	10723772	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_10726667_10730195
H1_mix_00084556	chr8	-	1377	8	NNC	ENSG00000254093.9	novel	1546	7	NA	NA	0	16850	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	75.8564702687428	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAGGAGAAAAATGT	7	True	NA	NA	False	NA	NA	NA	10839875	10748110	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_10748141_10765159_10765917_10820192_10820270_10826151_10826245_10831664_10831744_10832891_10832985_10834665_10834776_10839737
H1_mix_00084557	chr8	-	3133	1	FSM	ENSG00000255310.2	ENST00000530248.2	1939	1	-299	-895	-299	895	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTGTAACGTTGTATC	4793	False	NA	NA	False	AATAGA	-42	NA	11110025	11106892	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_11106900_11110000
H1_mix_00084558	chr8	-	472	3	NNC	ENSG00000171044.11	novel	728	3	NA	NA	575	-94	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGATAATTATGATGTACT	1607	False	NA	-18	True	ATTAAA	-13	NA	11200259	11111738	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_11111893_11113871_11114093_11200162
H1_mix_00084559	chr8	-	1034	2	FSM	ENSG00000255020.1	ENST00000525867.1	1099	2	41	24	41	-24	multi-exon	FALSE	canonical	1	1	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAATAAAGCTGTTTTCT	45	False	NA	NA	False	NA	NA	NA	11347461	11345771	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_11346641_11347296
H1_mix_00084560	chr8	-	3987	9	FSM	ENSG00000164733.22	ENST00000676952.1	3986	9	0	-1	0	1	multi-exon	TRUE	canonical	3	515	junction_6	32.5708362649779	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGATTCATTCCATGC	5026	False	NA	-2	True	AATAAA	-20	NA	11853819	11842522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_11845223_11845660_11845790_11847051_11847169_11847678_11847823_11848066_11848153_11849045_11849165_11850865_11850981_11852609_11852696_11853328
H1_mix_00084562	chr8	-	2975	6	FSM	ENSG00000164733.22	ENST00000532409.6	1859	6	-847	-269	-847	0	multi-exon	FALSE	canonical	3	522	junction_5	22.8175371151227	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGTAAGCTTGCCCTT	8420	False	NA	-58	True	NA	NA	NA	11850425	11844103	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_11845223_11845660_11845790_11847051_11847169_11847678_11847823_11848066_11848153_11849045
H1_mix_00084563	chr8	-	261	1	FSM	ENSG00000254866.2	ENST00000529497.2	240	1	-53	32	-53	-32	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGATTATCAAGAACCCCT	NA	False	NA	NA	False	NA	NA	NA	12151187	12150926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_12150900_12151200
H1_mix_00084564	chr8	-	2325	5	NIC	ENSG00000186523.15	novel	2145	6	NA	NA	0	256	combination_of_known_splicesites	FALSE	canonical	3	10	junction_4	30.335622624235	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGCCCGGCCCACCCGGC	NA	False	NA	NA	False	NA	NA	NA	12194067	12181839	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_12183707_12185375_12185526_12186699_12186834_12189807_12189889_12193974
H1_mix_00084565	chr8	-	2510	5	NIC	ENSG00000186523.15	novel	2403	7	NA	NA	0	256	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	29.8705540624877	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGCCCGGCCCACCCGGC	NA	False	NA	NA	False	NA	NA	NA	12194067	12181839	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_12183707_12185375_12185526_12186351_12186618_12186699_12186834_12193974
H1_mix_00084567	chr8	-	3503	2	NNC	ENSG00000283674.3	novel	3013	2	NA	NA	-5139	67	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGTGACTCATCCCAACCC	NA	False	NA	NA	False	NA	NA	NA	12497109	12485071	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_12487909_12496443
H1_mix_00084568	chr8	-	1140	1	Genic_Genomic	ENSG00000283674.3	novel	NA	NA	NA	NA	-13984	186	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAATAAGATAAA	NA	False	NA	NA	False	NA	NA	NA	12505954	12504814	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr8_-_12504800_12506000
H1_mix_00084569	chr8	-	1466	4	NNC	ENSG00000283674.3	novel	4514	6	NA	NA	-35607	-11130	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	9.84321537348893	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGGCGCCTGTAATCCC	NA	False	NA	NA	False	AATAAA	-19	NA	12527577	12516130	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_12516360_12518771_12518956_12525624_12525733_12526632
H1_mix_00084571	chr8	-	781	1	FSM	ENSG00000242607.1	ENST00000483613.1	781	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTCAGACTTAAAACAGTA	NA	False	NA	NA	False	NA	NA	NA	12571130	12570349	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_12570300_12571100
H1_mix_00084572	chr8	-	920	2	Intergenic	novelGene_1447	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	24	junction_1	0	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTATATAGAAAACAGAAAGC	9509	False	NA	NA	False	AATAGA	-35	NA	12591982	12591028	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_-_12591262_12591295
H1_mix_00084573	chr8	-	1474	2	NNC	ENSG00000283674.3	novel	5619	5	NA	NA	-101	-6173	intron_retention	FALSE	canonical	3	14	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGACGCGGGCGCCGG	NA	False	NA	NA	False	NA	NA	NA	12607765	12601157	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_12601855_12606988
H1_mix_00084575	chr8	-	695	2	FSM	ENSG00000283674.3	ENST00000636990.1	701	2	0	6	0	-6	multi-exon	FALSE	canonical	3	23	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCAAGCTCTTGGGTCCTG	5921	False	NA	-5	True	TATAAA	-16	NA	12659651	12626397	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_12626571_12659129
H1_mix_00084578	chr8	-	4866	11	ISM	ENSG00000154359.13	ENST00000533751.5	3043	12	8997	-1077	-2102	12	3prime_fragment	FALSE	canonical	3	186	junction_7	65.2433138336795	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAGGTCAGTGTTATAAA	NA	False	NA	3	True	AATAAA	-29	NA	12745345	12721893	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_-_12723255_12725726_12725880_12728900_12729064_12729173_12729333_12731735_12731858_12735285_12735401_12736700_12736798_12736899_12737141_12737994_12738145_12740873_12740997_12743163
H1_mix_00084581	chr8	-	3609	14	FSM	ENSG00000164741.15	ENST00000512044.6	3758	14	149	0	-87	0	multi-exon	FALSE	canonical	0	0	junction_13	30.2345857837476	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTGTATTCTTATTCA	345	False	NA	-99	True	NA	NA	NA	13276397	13085576	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_13085932_13086289_13086464_13088486_13088705_13090251_13090471_13091317_13091433_13092611_13092826_13094758_13094958_13095085_13095246_13098398_13098576_13099346_13100771_13102789_13102854_13110741_13110824_13115585_13115658_13276261
H1_mix_00084582	chr8	-	422	1	FSM	ENSG00000254425.1	ENST00000526681.1	550	1	290	-162	290	162	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGTTCTGGAAACAAAAGC	NA	False	NA	NA	False	AATATA	-2	NA	13909490	13909068	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_13909100_13909500
H1_mix_00084583	chr8	-	2656	8	NNC	ENSG00000198791.12	novel	6890	7	NA	NA	0	23485	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	429.806221168449	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGAGAGAGAGAAAAGGCT	11	True	NA	NA	False	AAAAAG	-1	NA	17246855	17201480	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_17201511_17229227_17230849_17232426_17232538_17234715_17234861_17237211_17237374_17242991_17243186_17245035_17245248_17246674
H1_mix_00084586	chr8	-	6239	15	FSM	ENSG00000129422.15	ENST00000693296.1	6125	15	-114	0	-114	0	multi-exon	FALSE	canonical	1	4	junction_12	6.0545985222231	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGCATCCTCTGACCTA	4722	False	NA	-7	True	AATAAA	-19	NA	17801208	17643801	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_17646140_17646981_17647080_17649845_17649963_17653185_17653282_17653424_17653499_17654560_17654667_17655862_17656066_17675185_17675253_17684327_17684543_17713213_17713253_17715766_17715902_17723671_17723834_17743603_17743800_17753716_17755962_17801060
H1_mix_00084600	chr8	-	944	1	FSM	ENSG00000104763.20	ENST00000637840.1	825	1	-131	12	-131	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGTTACATTTGTTCGT	8144	False	NA	NA	False	CATAAA	-13	NA	18076813	18075869	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_18075900_18076800
H1_mix_00084601	chr8	-	257	1	FSM	ENSG00000253384.1	ENST00000517431.1	1119	1	190	672	190	-672	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCCCAGATTCCAGCAGA	NA	False	NA	NA	False	ATTAAA	-23	NA	18089497	18089240	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_18089200_18089500
H1_mix_00084602	chr8	-	632	1	FSM	ENSG00000271654.1	ENST00000605477.1	670	1	-29	67	-29	-67	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCGCTCCCTGCACTGGG	NA	False	NA	NA	False	NA	NA	NA	18387806	18387174	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_18387200_18387800
H1_mix_00084603	chr8	-	830	1	FSM	ENSG00000278886.1	ENST00000623639.1	567	1	-173	-90	-173	90	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGGAATAAGACTAATGA	NA	False	NA	NA	False	CATAAA	-26	NA	18865420	18864590	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_18864600_18865400
H1_mix_00084604	chr8	-	498	3	FSM	ENSG00000147408.15	ENST00000524213.5	554	3	56	0	-32	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTTTTGCTGGTGCTC	1	True	NA	NA	False	GGGGCT	-21	NA	19757249	19505791	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_19506131_19601770_19601866_19757185
H1_mix_00084605	chr8	-	3265	9	FSM	ENSG00000168546.11	ENST00000524240.6	4991	9	61	1665	5	-45	multi-exon	TRUE	canonical	2	3	junction_7	2.29128784747792	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATCCAAGCTTAACCAAGG	5	True	NA	-45	True	GGGGCT	-9	NA	21788814	21692062	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_21693401_21694463_21694518_21702804_21702978_21704984_21705126_21705931_21706042_21750587_21750943_21774971_21775056_21782584_21782900_21788119
H1_mix_00084607	chr8	-	1339	7	FSM	ENSG00000147439.14	ENST00000399977.8	1340	7	1	0	1	0	multi-exon	FALSE	canonical	3	14	junction_5	64.2168634826987	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTCTCACCTGAGTAT	NA	False	NA	-46	True	NA	NA	NA	22644803	22620774	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_22621569_22623914_22624050_22624221_22624364_22629963_22630005_22630441_22630579_22636921_22636963_22644754
H1_mix_00084608	chr8	-	802	9	FSM	ENSG00000147439.14	ENST00000519863.5	803	9	1	0	1	0	multi-exon	FALSE	canonical	1	1	junction_1	81.2487499903845	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCCCATCAGCTTGACC	NA	False	NA	NA	False	NA	NA	NA	22644803	22621530	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_22621569_22622540_22622698_22623914_22624050_22624221_22624364_22629963_22630005_22630441_22630579_22636524_22636587_22636921_22636963_22644754
H1_mix_00084609	chr8	-	331	5	FSM	ENSG00000147439.14	ENST00000521140.1	591	5	1	259	1	-259	multi-exon	FALSE	canonical	3	160	junction_3	16.9189243156886	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTAAATGTCACCTGGGG	NA	False	NA	NA	False	AAAAAG	-1	NA	22644803	22629962	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_22630005_22630441_22630579_22636524_22636587_22636921_22636963_22644754
H1_mix_00084611	chr8	-	1464	9	FSM	ENSG00000120889.13	ENST00000523504.5	1464	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	102.465542988851	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTGATAATAAGGACACT	-4	True	NA	-37	True	NA	NA	NA	23069031	23022473	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_23022985_23024187_23024261_23027132_23027289_23027721_23027754_23028330_23028442_23028528_23028603_23029609_23029722_23030758_23030873_23068750
H1_mix_00084612	chr8	-	725	3	FSM	ENSG00000134013.16	ENST00000519243.1	763	3	38	0	38	0	multi-exon	FALSE	canonical	3	7	junction_2	1.5	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCGGGAGCTGGGCTACG	NA	False	NA	NA	False	NA	NA	NA	23404188	23368064	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_23368435_23370642_23370763_23403953
H1_mix_00084615	chr8	-	234	1	FSM	ENSG00000253483.1	ENST00000523257.1	519	1	343	-58	343	58	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGCTAGGCACAGTTGG	NA	False	NA	NA	False	NA	NA	NA	23483191	23482957	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_23483000_23483200
H1_mix_00084617	chr8	-	3239	3	FSM	ENSG00000253476.1_ENSG00000147437.10	ENST00000276414.4	1760	3	-1387	-92	539	88	multi-exon	FALSE	canonical	2	8	junction_1	0	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGGTGGCAGATGGGAGG	NA	False	NA	NA	False	NA	NA	NA	25426041	25419169	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_25419461_25421572_25421669_25423189
H1_mix_00084618	chr8	-	4338	6	ISM	ENSG00000104756.16	ENST00000221200.9	3367	12	20583	-292	12761	292	3prime_fragment	FALSE	canonical	3	52	junction_5	5.31413210223457	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTAAAAATACAGCTGTTG	NA	False	NA	-103	True	AGTAAA	-41	NA	25437850	25427554	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_-_25429974_25432503_25432638_25433329_25433436_25435362_25435513_25436234_25436331_25436417
H1_mix_00084621	chr8	-	1215	4	FSM	ENSG00000104228.13	ENST00000521253.1	1215	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	26.2424592343528	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCGCCACTGCCACCTGT	18	True	NA	NA	False	NA	NA	NA	27311238	27287700	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_27288128_27289161_27289281_27294079_27294311_27310800
H1_mix_00084622	chr8	-	1777	10	NNC	ENSG00000120885.22	novel	2749	9	NA	NA	0	3035	intron_retention	TRUE	non_canonical	0	0	junction_1	617.447873543354	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTGCATCTTTACTGAG	8	True	NA	NA	False	AAGAAA	-37	NA	27614692	27593881	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_27593998_27597996_27598251_27598459_27598636_27599779_27600010_27604290_27604396_27604923_27605336_27606353_27606525_27608937_27609087_27610474_27610601_27614654
H1_mix_00084623	chr8	-	2098	9	FSM	ENSG00000120885.22	ENST00000405140.7	2098	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_8	646.110478169175	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCACTTCAAGAATTGCT	3269	False	NA	-86	True	AATAAA	-36	NA	27611431	27597807	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_27598251_27598459_27598636_27599779_27600010_27604290_27604396_27604923_27605336_27606353_27606525_27608937_27609087_27610474_27610601_27611145
H1_mix_00084625	chr8	-	1039	6	FSM	ENSG00000120885.22	ENST00000560566.5	1039	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_5	762.294273886404	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCCGCCACAACTCCACG	-23	True	NA	NA	False	NA	NA	NA	27611751	27604365	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_27604396_27604923_27605336_27606353_27606525_27608937_27609087_27610474_27610601_27611600
H1_mix_00084630	chr8	-	417	2	FSM	ENSG00000147419.19	ENST00000519843.1	481	2	0	64	0	-64	multi-exon	FALSE	canonical	3	35	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTTTTTTAAAAAAAGGC	9904	False	NA	NA	False	NA	NA	NA	27752589	27747940	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_27748280_27752511
H1_mix_00084631	chr8	-	877	8	FSM	ENSG00000147419.19	ENST00000517979.1	877	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	201.127333004822	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGAGCTGTGGCATTGAGA	7	True	NA	NA	False	AAAAAG	-43	NA	27772613	27748071	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_27748280_27748494_27748599_27752511_27752588_27756718_27756771_27762418_27762459_27764285_27764534_27765203_27765252_27772512
H1_mix_00084636	chr8	-	1069	7	NIC	ENSG00000214050.8	novel	1254	9	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	24.662724910277	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGTGGACAGATTTACG	9	True	NA	-49	True	AGTAAA	-16	NA	28490235	28428411	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_28428737_28447170_28447274_28452243_28452477_28463611_28463819_28473771_28473808_28483347_28483463_28490185
H1_mix_00084637	chr8	-	1205	7	FSM	ENSG00000214050.8	ENST00000346498.6	1205	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	23.259406699226	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTACGGTATTTCAGTAA	4774	False	NA	-85	True	NA	NA	NA	28490278	28428447	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_28428737_28447170_28447274_28452243_28452477_28456765_28456931_28463611_28463819_28483347_28483463_28490185
H1_mix_00084640	chr8	-	2664	18	NIC	ENSG00000104299.15	novel	2549	17	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_16	59.3974356628449	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTCCTCTGTTGAAC	38	True	NA	-5	True	AATAAA	-18	NA	28889911	28767660	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_28768323_28769888_28770027_28770981_28771081_28775758_28775927_28777828_28777954_28780822_28780995_28787828_28787890_28793806_28793988_28796543_28796656_28812326_28812462_28813491_28813613_28835291_28835379_28837636_28837777_28846746_28846810_28850212_28850274_28859435_28859564_28862039_28862213_28889873
H1_mix_00084643	chr8	-	692	3	FSM	ENSG00000104299.15	ENST00000520316.5	692	3	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	9	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGACAAAGAGGGACCCGG	292	False	NA	NA	False	NA	NA	NA	28775925	28769600	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_28770027_28770981_28771081_28775758
H1_mix_00084645	chr8	-	559	6	FSM	ENSG00000104299.15	ENST00000520184.1	559	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	97.1361930487293	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCACCGAGCACACCGGC	15	True	NA	NA	False	NA	NA	NA	28889934	28837703	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_28837777_28846746_28846810_28850212_28850274_28859435_28859564_28862039_28862213_28889873
H1_mix_00084646	chr8	-	8680	39	NIC	ENSG00000197892.13	novel	8743	40	NA	NA	0	0	intron_retention	FALSE	canonical	2	11	junction_28	6.22127749170609	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTCTGAGGCCAGTCTT	1	True	NA	-9	True	AATAAA	-23	NA	29263070	29067277	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_29070767_29071619_29072317_29092744_29092879_29099132_29099242_29108138_29108193_29109433_29109512_29109917_29110071_29113462_29113556_29116830_29117008_29118867_29118993_29122590_29122647_29123365_29123493_29124023_29124124_29126481_29126512_29127121_29127269_29130532_29130666_29132307_29132466_29134039_29134211_29140062_29140192_29140467_29140618_29142156_29142304_29146377_29146541_29147391_29147603_29148576_29148768_29150296_29150384_29155725_29155857_29160732_29160868_29165661_29165773_29167372_29167586_29176067_29176180_29177465_29177579_29180103_29180239_29181918_29182007_29186291_29186473_29188514_29188608_29190996_29191058_29196186_29196200_29245345_29245440_29262979
H1_mix_00084648	chr8	-	575	1	FSM	ENSG00000260253.1	ENST00000567818.1	751	1	158	18	158	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATTTTAAAAAGAGAAAG	NA	False	NA	NA	False	AATAAA	-5	NA	29353012	29352437	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_29352400_29353000
H1_mix_00084650	chr8	-	641	1	FSM	ENSG00000241511.1	ENST00000492525.1	396	1	-116	-129	-116	129	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCTCCCAAAGCACTGGG	NA	False	NA	NA	False	NA	NA	NA	30117895	30117254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_30117300_30117900
H1_mix_00084651	chr8	-	1569	9	NNC	ENSG00000197265.9	novel	1747	8	NA	NA	0	59630	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	123.841632741175	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGCTTGGCCGGGCGGA	-19	True	NA	NA	False	NA	NA	NA	30658236	30518687	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_30518715_30578522_30579038_30580280_30580397_30607056_30607151_30612298_30612482_30614607_30614716_30635031_30635124_30653432_30653603_30657972
H1_mix_00084652	chr8	-	1410	12	FSM	ENSG00000104687.14	ENST00000541648.5	1410	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	176.67095997694	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCAGGAGACACGTGTGG	-12	True	NA	-83	True	NA	NA	NA	30727835	30679519	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_30679670_30680903_30681038_30681929_30682062_30684087_30684200_30692968_30693056_30696379_30696480_30700080_30700136_30703092_30703241_30708071_30708142_30709813_30709903_30712061_30712089_30727529
H1_mix_00084653	chr8	-	11625	11	NNC	ENSG00000133863.9	novel	11476	11	NA	NA	708	121	at_least_one_novel_splicesite	TRUE	canonical	2	8	junction_6	5.36283507111677	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCAGGGTTTTTTTCTTTT	-1	True	NA	-4	True	AATAAA	-16	NA	30912300	30831422	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_30833324_30836802_30838062_30839905_30839965_30842003_30849317_30858667_30858831_30859910_30860058_30867264_30867503_30874936_30875103_30887166_30887312_30898741_30898818_30912142
H1_mix_00084654	chr8	-	1764	2	FSM	ENSG00000172733.12	ENST00000339382.3	2693	2	927	2	568	-2	multi-exon	FALSE	canonical	2	10	junction_1	0	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAGTTTGGATTCTTAAT	975	False	NA	-6	True	AATAAA	-16	NA	31032788	30995803	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_30996698_31031918
H1_mix_00084663	chr8	-	313	1	FSM	ENSG00000188512.6	ENST00000523393.1	313	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAATAATTGGCCACTGC	NA	False	NA	NA	False	AAAAAG	-9	NA	33969879	33969566	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_33969600_33969900
H1_mix_00084664	chr8	-	607	1	FSM	ENSG00000233170.4	ENST00000521192.2	667	1	-4	64	-4	-64	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCTGAATGGGAAGCCAA	17	True	NA	NA	False	AAAACA	-41	NA	37748008	37747401	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_37747400_37748000
H1_mix_00084666	chr8	-	2458	2	FSM	ENSG00000188778.6	ENST00000345060.5	2585	2	38	89	36	-89	multi-exon	FALSE	canonical	3	3	junction_1	0	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCACAACCTCTACCTTC	365	False	NA	-89	True	CATAAA	-23	NA	37966561	37963078	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_37964240_37965264
H1_mix_00084668	chr8	-	908	7	NIC	ENSG00000147535.17	novel	2134	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	177.053115068771	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTAAATGTGTGCTTTTTT	2	True	NA	-20	True	AATAAA	-2	NA	38269196	38263129	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_38263407_38266140_38266312_38267266_38267392_38267896_38267961_38268370_38268462_38268881_38268991_38269125
H1_mix_00084674	chr8	-	5276	23	FSM	ENSG00000147548.17	ENST00000433384.6	5276	23	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_9	143.800567821498	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCGGTGGATTTTACCT	1	True	NA	NA	False	ATTAAA	-20	NA	38382245	38275022	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38275883_38276295_38276501_38278305_38278413_38279539_38279682_38281466_38281584_38288486_38288757_38289392_38289506_38290474_38290678_38295795_38295953_38304586_38304758_38305247_38305446_38314646_38314774_38315415_38315545_38315911_38316043_38318894_38318941_38321071_38321173_38326729_38326857_38329377_38329894_38331430_38331586_38337304_38337468_38338535_38338608_38347496_38348216_38381798
H1_mix_00084676	chr8	-	3695	8	ISM	ENSG00000147548.17	ENST00000316985.7	3995	10	-51	3338	-51	0	5prime_fragment	FALSE	canonical	3	303	junction_2	16.5480130134671	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACAATCCTTAAATATTT	4026	False	NA	-19	True	AATAAA	-19	NA	38382323	38319754	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_-_38321173_38326729_38326857_38329377_38329894_38331430_38331586_38337304_38337468_38338535_38338608_38347496_38348216_38381798
H1_mix_00084677	chr8	-	695	1	FSM	ENSG00000272159.1	ENST00000606593.1	695	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTATGTGTGTGCCTTGGGA	5503	False	NA	NA	False	AATAAA	-27	NA	38408742	38408047	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38408000_38408700
H1_mix_00084678	chr8	-	4157	19	FSM	ENSG00000077782.22	ENST00000335922.9	4157	19	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_17	351.261030756893	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATCTATGGGCTGTATG	13	False	NA	-20	True	AATAAA	-16	NA	38468621	38412730	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38413805_38413917_38414024_38414151_38414290_38414558_38414630_38414778_38414902_38415869_38416061_38417305_38417417_38417869_38417992_38418227_38418374_38419538_38419736_38421796_38421942_38424508_38424700_38426121_38426246_38427920_38428094_38428345_38428436_38429681_38429949_38440305_38440374_38457355_38457535_38467980
H1_mix_00084680	chr8	-	1499	6	FSM	ENSG00000077782.22	ENST00000527114.5	1499	6	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_5	336.357785698503	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGCCGACAAGGCCGC	9370	False	NA	NA	False	TATAAA	-13	NA	38420344	38414778	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38414902_38415869_38416061_38417305_38417417_38417869_38417992_38418227_38418374_38419538
H1_mix_00084687	chr8	-	1527	5	NNC	ENSG00000169490.17	novel	3239	4	NA	NA	0	7745	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	203.898871992956	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCTCATTTTTTTCCTT	23	True	NA	NA	False	NA	NA	NA	38996483	38981062	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_38981096_38990526_38991546_38993544_38993661_38995317_38995406_38996212
H1_mix_00084688	chr8	-	1249	5	NNC	ENSG00000169490.17	novel	3239	4	NA	NA	0	7745	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	203.898871992956	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCTCATTTTTTTCCTT	23	True	NA	NA	False	NA	NA	NA	38996483	38981062	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_38981095_38990803_38991546_38993544_38993661_38995317_38995406_38996212
H1_mix_00084689	chr8	-	3293	4	FSM	ENSG00000169490.17	ENST00000456845.6	3295	4	0	2	0	-2	multi-exon	FALSE	canonical	3	17	junction_3	227.394419945218	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTCCTGGCACTGTGTTC	23	True	NA	-2	True	AATAAA	-19	NA	38996483	38988809	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38991546_38993544_38993661_38995317_38995694_38996418
H1_mix_00084690	chr8	-	1632	4	FSM	ENSG00000169490.17	ENST00000397070.6	1631	4	0	-1	0	1	multi-exon	FALSE	canonical	3	46	junction_3	213.735038462735	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTGTATGAGTATTTTCA	-3	True	NA	-2	True	AATAAA	-16	NA	38996509	38990803	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38991546_38993544_38993661_38995317_38995795_38996212
H1_mix_00084695	chr8	-	291	2	FSM	ENSG00000253802.2	ENST00000522486.1	505	2	32	182	-7	-182	multi-exon	FALSE	canonical	1	1	junction_1	0	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGCATGAACAAAAACGTG	0	True	NA	NA	False	AATAAA	-10	NA	40343370	40299256	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_40299455_40343277
H1_mix_00084696	chr8	-	2287	7	NIC	ENSG00000165061.15	novel	2471	7	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	24.5181338785987	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTGTTTCAGTTTGGG	13	False	NA	NA	False	AGTAAA	-17	NA	40897810	40530592	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_40532239_40581164_40581262_40697244_40697402_40767640_40767731_40808508_40808572_40825574_40825681_40897682
H1_mix_00084697	chr8	-	1017	8	NIC	ENSG00000165061.15	novel	2471	7	NA	NA	2	-1527	combination_of_known_junctions	FALSE	canonical	1	2	junction_6	20.5872954681735	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATAAGGATTCACAGATT	18	False	NA	-21	True	AATAAA	-6	NA	40897805	40532116	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_40532239_40581164_40581262_40674703_40674932_40697244_40697402_40767640_40767731_40786688_40786783_40825574_40825681_40897682
H1_mix_00084699	chr8	-	8099	42	NNC	ENSG00000029534.21	novel	8292	43	NA	NA	30194	-1	intron_retention	FALSE	canonical	1	1	junction_28	4.80840529193588	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGGCTCTATCTCTCCTT	-1	True	NA	-5	True	AATAAA	-17	NA	41767399	41653225	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_41655754_41661875_41661942_41663658_41663743_41668266_41668565_41672353_41672913_41684543_41684691_41686151_41686284_41688155_41688231_41688510_41688590_41690226_41690347_41690473_41690600_41692647_41692877_41693104_41693202_41693897_41694103_41694591_41694804_41695176_41695332_41696362_41696588_41696675_41696774_41698042_41698122_41699451_41699549_41701549_41701623_41702051_41702145_41704040_41704140_41704373_41704473_41706142_41706242_41708777_41708976_41714155_41714255_41714975_41715071_41715651_41715850_41716952_41717052_41717603_41717703_41718105_41718205_41719660_41719859_41723124_41723224_41723534_41723634_41724455_41724555_41725760_41725947_41727249_41727349_41727907_41728007_41733970_41734070_41758035_41758138_41767341
H1_mix_00084700	chr8	-	2012	14	FSM	ENSG00000029534.21	ENST00000645531.1	2012	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	6.56960906855267	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTACTTTTTCCCAACCT	8226	False	NA	NA	False	TTTAAA	-18	NA	41693929	41655374	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_41655754_41661800_41661942_41663658_41663743_41668266_41668565_41672353_41672427_41684543_41684691_41686151_41686284_41688155_41688231_41688510_41688590_41690226_41690347_41690473_41690600_41692647_41692877_41693104_41693202_41693897
H1_mix_00084703	chr8	-	2284	11	FSM	ENSG00000168575.10	ENST00000520179.5	2284	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	38.1980365987573	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTTCTTCCAGCTGCA	-6	True	NA	NA	False	NA	NA	NA	42541512	42417802	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_42417968_42428757_42428843_42430063_42430250_42436988_42437578_42439449_42439654_42444645_42444763_42459895_42459993_42463004_42463091_42465776_42465918_42472101_42472655_42541451
H1_mix_00084704	chr8	-	2414	2	FSM	ENSG00000131931.8	ENST00000345117.2	1943	2	-84	-387	-64	385	multi-exon	FALSE	canonical	3	11	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACACTCCAGCCTGGGCA	NA	False	NA	NA	False	NA	NA	NA	42843389	42836288	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_42838337_42843023
H1_mix_00084705	chr8	-	754	6	FSM	ENSG00000120925.16	ENST00000528318.5	1169	6	0	415	0	-415	multi-exon	FALSE	canonical	3	85	junction_5	16.3095064303001	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTAATGCTAAAGCATG	-19	True	NA	NA	False	NA	NA	NA	42896723	42861744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_42861856_42865415_42865490_42870003_42870113_42873930_42874007_42887727_42887872_42896483
H1_mix_00084706	chr8	-	834	4	FSM	ENSG00000253729.8	ENST00000536483.1	834	4	0	0	0	0	multi-exon	FALSE	canonical	3	830	junction_1	27.7968823191858	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGAATCTACTATACTTT	NA	False	NA	NA	False	NA	NA	NA	47778719	47774133	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_47774378_47776843_47776984_47777685_47777875_47778458
H1_mix_00084707	chr8	-	11908	83	NNC	ENSG00000253729.8	novel	13459	86	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	121	junction_28	200.103753575794	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCACTTGCTGTGCTCTCG	801	False	NA	NA	False	NA	NA	NA	47960178	47778458	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_47778661_47778727_47778800_47779003_47779094_47782161_47782255_47782377_47782599_47783741_47783810_47785112_47785318_47788905_47789050_47789150_47789239_47794289_47794502_47798236_47798398_47799209_47799391_47800792_47800987_47803305_47803481_47807136_47807327_47817449_47817562_47819401_47819511_47820718_47820944_47821603_47821793_47823857_47823997_47826655_47826862_47828167_47828348_47830604_47830737_47831813_47831927_47834195_47834397_47836337_47836528_47837211_47837420_47839147_47839250_47840015_47840190_47849153_47849304_47849378_47849504_47852672_47852785_47854082_47854215_47855221_47855374_47857155_47857300_47858515_47858636_47858848_47858987_47859610_47859760_47860898_47860972_47862061_47862128_47862372_47862542_47863398_47863578_47864555_47864764_47877723_47877852_47879490_47879659_47881415_47881521_47881911_47882098_47885943_47886148_47887546_47887706_47888517_47888651_47889013_47889223_47890256_47890481_47893138_47893388_47897160_47897295_47898469_47898570_47900372_47900468_47902568_47902796_47904868_47904977_47912409_47912563_47913900_47914065_47915327_47915419_47918276_47918384_47927193_47927354_47927770_47927891_47929091_47929179_47929852_47930013_47930671_47930788_47933019_47933173_47933964_47934091_47935008_47935059_47935731_47935901_47936352_47936518_47939550_47939698_47943208_47943367_47943852_47943884_47943973_47944030_47953619_47953720_47953806_47953920_47954337_47954447_47955873_47955949_47957170_47957264_47957354_47957432_47959972
H1_mix_00084709	chr8	-	460	2	FSM	ENSG00000253729.8	ENST00000535375.1	464	2	4	0	4	0	multi-exon	FALSE	canonical	3	284	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGATGTTCCTCACCCAG	7241	False	NA	NA	False	NA	NA	NA	47939946	47936453	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_47936518_47939550
H1_mix_00084710	chr8	-	1044	5	NIC	ENSG00000168300.14	novel	4044	6	NA	NA	1	-21	combination_of_known_junctions	FALSE	canonical	3	27	junction_4	57.0936730295048	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTATTTTTCTTTAAATCT	16	True	NA	-14	True	AATAAA	-18	NA	51899023	51820167	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_51820719_51831443_51831568_51833517_51833690_51845660_51845764_51898929
H1_mix_00084717	chr8	-	2531	10	NNC	ENSG00000120992.18	novel	2526	9	NA	NA	0	11628	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	595.645121789066	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAGAAATTCCTAAGCTC	413	False	NA	NA	False	AAAAAG	-2	NA	54101535	54034738	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_54034769_54046373_54048119_54051011_54051189_54052654_54052757_54055059_54055134_54062253_54062325_54063327_54063376_54065747_54065814_54100907_54100940_54101349
H1_mix_00084719	chr8	-	2519	10	NNC	ENSG00000120992.18	novel	2515	9	NA	NA	0	11628	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	468.116504439221	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAGAAATTCCTAAGCTC	20	True	NA	NA	False	AAAAAG	-2	NA	54101928	54034738	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_54034769_54046373_54048119_54051011_54051189_54052654_54052757_54055059_54055134_54062253_54062325_54063327_54063376_54065747_54065814_54100907_54100940_54101754
H1_mix_00084720	chr8	-	2515	10	NNC	ENSG00000120992.18	novel	2515	9	NA	NA	0	11628	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	468.116504439221	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAGAAATTCCTAAGCTC	20	True	NA	NA	False	AAAAAG	-2	NA	54101928	54034738	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_54034769_54046377_54048119_54051011_54051189_54052654_54052757_54055059_54055134_54062253_54062325_54063327_54063376_54065747_54065814_54100907_54100940_54101754
H1_mix_00084721	chr8	-	2512	10	NNC	ENSG00000120992.18	novel	2515	9	NA	NA	0	11628	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	468.116504439221	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAGAAATTCCTAAGCTC	20	True	NA	NA	False	AAAAAG	-2	NA	54101928	54034738	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_54034769_54046380_54048119_54051011_54051189_54052654_54052757_54055059_54055134_54062253_54062325_54063327_54063376_54065747_54065814_54100907_54100940_54101754
H1_mix_00084725	chr8	-	2923	2	Intergenic	novelGene_1464	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAAAAGTCTAGAAATAGAA	NA	False	NA	-3	True	AATAAA	-18	NA	54228225	54212830	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_-_54214619_54227090
H1_mix_00084726	chr8	-	5926	8	NNC	ENSG00000167904.16	novel	2573	8	NA	NA	-3472	79	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	43.2099761723647	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCAGGCTGGAGTGCAGT	5960	False	NA	79	True	NA	NA	NA	55767452	55738664	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_55740219_55743480_55743621_55745060_55745122_55750963_55751158_55756243_55756412_55762634_55763029_55763935_55767005_55767106
H1_mix_00084727	chr8	-	221	1	FSM	ENSG00000240905.3	ENST00000468562.3	301	1	119	-39	119	39	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGACAATGGTGACCTG	8918	False	NA	NA	False	AAAAAG	-34	NA	55980421	55980200	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_55980200_55980400
H1_mix_00084728	chr8	-	1488	1	FSM	ENSG00000236814.1	ENST00000435260.1	1170	1	39	-357	39	357	mono-exon	FALSE	NA	NA	NA	NA	NA	371	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATTTCATTCTTT	45	False	NA	NA	False	AATAAA	-13	NA	56051168	56049680	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_56049700_56051200
H1_mix_00084729	chr8	-	671	3	FSM	ENSG00000008988.11	ENST00000518875.5	671	3	0	0	0	0	multi-exon	FALSE	canonical	3	8543	junction_2	63.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAAACGATAAACACTTG	0	True	NA	NA	False	AATGAA	-42	NA	56074498	56073315	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_56073769_56074059_56074160_56074380
H1_mix_00084731	chr8	-	1172	1	FSM	ENSG00000253541.1	ENST00000517342.1	1162	1	-48	38	-48	-38	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGGACAAGGACCATAAGA	238	False	NA	NA	False	NA	NA	NA	56478035	56476863	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_56476900_56478000
H1_mix_00084732	chr8	-	421	1	FSM	ENSG00000242970.2	ENST00000482895.2	345	1	-24	-52	-24	52	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATGGAAACTGTACTTAA	-4	True	NA	NA	False	NA	NA	NA	58588788	58588367	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_58588400_58588800
H1_mix_00084734	chr8	-	2167	1	FSM	ENSG00000255397.1	ENST00000529239.1	2167	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAGGGCACAGCCCTCCT	NA	False	NA	NA	False	NA	NA	NA	60939871	60937704	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_60937700_60939900
H1_mix_00084738	chr8	-	1688	6	FSM	ENSG00000137563.13	ENST00000678045.1	2842	6	1064	90	1064	-90	multi-exon	FALSE	canonical	3	428	junction_1	19.6834956245073	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCCTGTAATCCCAGCAC	3669	False	NA	NA	False	NA	NA	NA	63035770	63022806	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_63023998_63024079_63024187_63026157_63026297_63027180_63027266_63030166_63030218_63035655
H1_mix_00084739	chr8	-	961	8	FSM	ENSG00000137563.13	ENST00000518113.2	961	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	161.515779225361	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAAGAGTTGAGTGGAA	30	True	NA	-5	True	AATAAA	-17	NA	63038801	63023508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_63023740_63023906_63023998_63024079_63024187_63026157_63026297_63027180_63027266_63030166_63030218_63035655_63035771_63038659
H1_mix_00084740	chr8	-	7462	6	FSM	ENSG00000172817.4	ENST00000310193.4	7462	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	1.49666295470958	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGACTGATTATGTCTCTT	-4	True	NA	1	True	AATAAA	-17	NA	64798737	64590850	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_64596930_64604681_64604858_64615025_64615233_64615690_64616282_64624402_64624540_64798465
H1_mix_00084742	chr8	-	3638	14	NNC	ENSG00000205268.11	novel	6961	13	NA	NA	0	85942	intron_retention	FALSE	non_canonical	0	0	junction_1	128.963230391067	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCGGGCGTGGCTAGGA	-1	True	NA	NA	False	AATACA	-27	NA	65842064	65628391	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_65628420_65717684_65719496_65723540_65723622_65724254_65724352_65724776_65724922_65726874_65726967_65727169_65727302_65734793_65734895_65739501_65739598_65745406_65745471_65747651_65747804_65779719_65779804_65782782_65782844_65841370
H1_mix_00084743	chr8	-	3651	14	NNC	ENSG00000205268.11	novel	6961	13	NA	NA	0	45830	intron_retention	FALSE	non_canonical	0	0	junction_1	128.963230391067	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATCTTCCTTAAAGGCT	-1	True	NA	NA	False	AAAAAG	-22	NA	65842064	65668503	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_65668543_65717682_65719496_65723540_65723622_65724254_65724352_65724776_65724922_65726874_65726967_65727169_65727302_65734793_65734895_65739501_65739598_65745406_65745471_65747651_65747804_65779719_65779804_65782782_65782844_65841370
H1_mix_00084744	chr8	-	4150	14	NNC	ENSG00000205268.11	novel	6961	13	NA	NA	-249	10909	intron_retention	FALSE	non_canonical	0	0	junction_1	128.963230391067	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACCAGAGACATCAAGC	NA	False	NA	NA	False	NA	NA	NA	65842571	65703424	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_65703453_65717679_65719496_65723540_65723622_65724254_65724352_65724776_65724922_65726874_65726967_65727169_65727302_65734793_65734895_65739501_65739598_65745406_65745471_65747651_65747804_65779719_65779804_65782782_65782844_65841370
H1_mix_00084745	chr8	-	1088	1	FSM	ENSG00000272155.1	ENST00000606067.1	445	1	-650	7	-650	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTAATTTGGAATTAATG	NA	False	NA	NA	False	AATAAA	-13	NA	65715428	65714340	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_65714300_65715400
H1_mix_00084748	chr8	-	2715	1	FSM	ENSG00000185697.17	ENST00000523304.1	2103	1	-578	-34	-578	34	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGTGTTCCACAGAGGTA	NA	False	NA	NA	False	NA	NA	NA	66614825	66612110	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_66612100_66614800
H1_mix_00084749	chr8	-	673	1	FSM	ENSG00000213005.3	ENST00000521862.1	606	1	2	-69	2	69	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATATATACTTAAATCCT	23	False	NA	NA	False	AATAAA	-24	NA	66768003	66767330	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_66767300_66768000
H1_mix_00084752	chr8	-	7281	39	NNC	ENSG00000066777.9	novel	7320	39	NA	NA	4	-1	intron_retention	FALSE	canonical	3	40	junction_6	50.0582209508542	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCAGTGCAATCAAAACCT	6	True	NA	-31	True	AATAAA	-16	NA	67343777	67197674	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_67199099_67200395_67200514_67201466_67201606_67203082_67203252_67204679_67204820_67211482_67211616_67216607_67216663_67217781_67217921_67218002_67218139_67219430_67219561_67224902_67225034_67226022_67226184_67227136_67227310_67227446_67227599_67227962_67228133_67228223_67228265_67232854_67232946_67238342_67238494_67238734_67238894_67240161_67240291_67251298_67251451_67253450_67253623_67257731_67257817_67258084_67258291_67259814_67259927_67266005_67266208_67266875_67266985_67267090_67267231_67267342_67267443_67271701_67271937_67275975_67276110_67277281_67277458_67287954_67288066_67291846_67292124_67296430_67296611_67299208_67299356_67301223_67301381_67302435_67302467_67343163
H1_mix_00084753	chr8	-	571	5	FSM	ENSG00000066777.9	ENST00000519436.1	571	5	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	62.1907348404889	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTACAACACCAGGCAAAAA	259	False	NA	NA	False	NA	NA	NA	67343677	67299313	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_67299356_67301223_67301381_67302435_67302467_67343163_67343337_67343509
H1_mix_00084754	chr8	-	5887	11	FSM	ENSG00000140396.13	ENST00000518363.2	1834	11	-70	-3983	-70	196	multi-exon	FALSE	canonical	2	10	junction_10	16.996764397967	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAATATAAGCCACATCTA	NA	False	NA	NA	False	AATAAA	-22	NA	70148530	70109585	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_70113644_70121301_70121392_70123883_70124083_70124687_70124866_70126812_70127048_70128432_70128511_70128701_70128981_70131836_70132003_70138202_70138333_70141183_70141400_70148272
H1_mix_00084755	chr8	-	3372	11	FSM	ENSG00000067167.8	ENST00000521425.5	3394	11	22	0	22	0	multi-exon	FALSE	canonical	2	20	junction_10	275.791878052999	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATCCTGGATGTTTCT	818	False	NA	-11	True	AATAAA	-18	NA	70607756	70573441	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_70575006_70583163_70583325_70583649_70583794_70586894_70587000_70587105_70587177_70594505_70594591_70596262_70596322_70597894_70598012_70598133_70598256_70600018_70600083_70606876
H1_mix_00084756	chr8	-	1334	3	NNC	ENSG00000178860.9	novel	1956	2	NA	NA	-364	14927	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGCTATAAAGTAGCAG	689	False	NA	NA	False	NA	NA	NA	71843777	71826632	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_71826650_71841563_71842748_71843644
H1_mix_00084759	chr8	-	1543	6	FSM	ENSG00000147604.14	ENST00000396467.5	1526	6	0	-17	0	0	multi-exon	FALSE	canonical	1	4	junction_5	12349.8789241029	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTTTTCCTTTTGCA	-6	True	NA	-24	True	TATAAA	-13	NA	73293633	73290266	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_73291253_73291551_73291662_73291772_73291911_73292238_73292406_73292688_73292796_73293598
H1_mix_00084761	chr8	-	2845	14	NIC	ENSG00000040341.18	novel	2970	15	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	196	junction_2	115.76859187148	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTGTTGTTGTTCTTTTG	-6	True	NA	0	True	AGTAAA	-24	NA	73746846	73420368	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_73421466_73422613_73422703_73552011_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73738283_73738350_73739755_73739869_73746782
H1_mix_00084762	chr8	-	2645	12	NIC	ENSG00000040341.18	novel	2970	15	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_11	174.139869687777	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTGTTGTTGTTCTTTTG	759	False	NA	0	True	AGTAAA	-24	NA	73746825	73420368	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_73421466_73422613_73422703_73552011_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73746782
H1_mix_00084763	chr8	-	3905	12	NIC	ENSG00000040341.18	novel	4061	12	NA	NA	-2658	740	combination_of_known_junctions	FALSE	canonical	3	86	junction_1	128.041444736647	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCCATTCATGTACAGAAC	6582	False	NA	NA	False	NA	NA	NA	73741002	73526628	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_73527805_73552011_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73738283_73738350_73739755
H1_mix_00084764	chr8	-	2759	14	NIC	ENSG00000040341.18	novel	4061	12	NA	NA	8	525	combination_of_known_junctions	FALSE	canonical	3	42	junction_13	198.215948223592	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGAAAAGTGTATTGTTT	24	True	NA	-12	True	AATAAA	-8	NA	73747458	73526843	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_73527805_73552011_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73709031_73709163_73738283_73738350_73739755_73739869_73747386
H1_mix_00084766	chr8	-	7733	13	ISM	ENSG00000040341.18	ENST00000524300.6	2970	15	-83	125777	-20	3458	5prime_fragment	FALSE	canonical	3	123	junction_10	146.163720988942	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	661	False	NA	NA	False	NA	NA	NA	73746923	73546145	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_-_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73709031_73709163_73738283_73738350_73739755_73739869_73746782
H1_mix_00084772	chr8	-	1527	2	NNC	ENSG00000249395.4	novel	1513	2	NA	NA	-21	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTAATGGAAGTGTTCTTC	NA	False	NA	-30	True	AATAAA	-26	NA	75278658	75223120	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_75224360_75278370
H1_mix_00084773	chr8	-	688	2	FSM	ENSG00000164751.15	ENST00000520203.1	688	2	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTAAAATTGCATGTATAT	-9	True	NA	NA	False	NA	NA	NA	77000230	76987891	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_76988339_76999989
H1_mix_00084775	chr8	-	911	1	FSM	ENSG00000240540.2	ENST00000463217.2	1183	1	327	-55	327	55	mono-exon	FALSE	NA	NA	NA	NA	NA	536	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGAAAACAAACATACAAACA	NA	False	NA	NA	False	AATAAA	-14	NA	79572008	79571097	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_79571100_79572000
H1_mix_00084776	chr8	-	846	3	NNC	ENSG00000147586.10	novel	838	3	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_2	164.5	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCATGGTACTAGTTTAA	11	True	NA	0	True	AATAAA	-21	NA	80030252	79918716	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_79919149_80002998_80003181_80030020
H1_mix_00084778	chr8	-	627	3	NIC	ENSG00000147586.10	novel	838	3	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	3	50	junction_2	182.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTATTAGAATTTTCTTT	17	False	NA	-5	True	AATAAA	-23	NA	80030246	79918854	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_79919149_80002998_80003121_80030035
H1_mix_00084779	chr8	-	325	1	FSM	ENSG00000272264.1	ENST00000607017.1	577	1	54	198	54	-198	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCACAGCCTACTGGGCAG	NA	False	NA	NA	False	NA	NA	NA	80033246	80032921	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_80032900_80033200
H1_mix_00084782	chr8	-	712	5	FSM	ENSG00000164684.13	ENST00000519936.1	712	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	1.6583123951777	176	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGATGTTCAAATGCCTCT	1292	False	NA	NA	False	NA	NA	NA	80873665	80670592	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_80670604_80687225_80687459_80693003_80693108_80821373_80821616_80873543
H1_mix_00084798	chr8	-	2578	3	FSM	ENSG00000253549.6	ENST00000654303.1	2578	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTATACTGATTTGCTT	18	False	NA	NA	False	AATAAA	-21	NA	85463801	85440595	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_85442238_85462735_85462802_85462931
H1_mix_00084799	chr8	-	782	3	FSM	ENSG00000253549.6	ENST00000524052.2	796	3	0	14	0	-14	multi-exon	FALSE	canonical	2	5	junction_2	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCCTTGACCAATGTATT	537	False	NA	NA	False	AATAAA	-45	NA	85463282	85456498	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_85456864_85462735_85462802_85462931
H1_mix_00084801	chr8	-	1008	10	NIC	ENSG00000176623.12	novel	2970	10	NA	NA	2	-10	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	73.4198143269409	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAATTCTAAACTTAATA	-15	True	NA	-49	True	AATAAA	-13	NA	86508673	86474258	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_86474359_86474819_86474915_86477293_86477325_86478922_86479011_86480276_86480333_86484871_86484962_86486483_86486644_86488551_86488640_86506994_86507113_86508491
H1_mix_00084804	chr8	-	757	3	FSM	ENSG00000251136.10	ENST00000524166.1	836	3	1	78	1	-78	multi-exon	FALSE	canonical	1	2	junction_2	3	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTAATGAATGTGAAAT	NA	False	NA	NA	False	NA	NA	NA	89617156	89611433	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_89611990_89615182_89615306_89617078
H1_mix_00084805	chr8	-	1826	2	FSM	ENSG00000251136.10	ENST00000658477.1	1934	2	108	0	108	0	multi-exon	FALSE	canonical	2	2	junction_1	0	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAAAATAAGATGCATTG	5782	False	NA	NA	False	AATAGA	-2	NA	89723392	89720926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_89721375_89722014
H1_mix_00084807	chr8	-	941	2	FSM	ENSG00000104320.14	ENST00000494804.1	593	2	0	-348	0	348	multi-exon	FALSE	canonical	3	223	junction_1	0	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCGATATGAATTTCTTC	-22	True	NA	NA	False	AAGAAA	-33	NA	89984665	89982055	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_89982856_89984524
H1_mix_00084808	chr8	-	2562	12	NNC	ENSG00000104327.7	novel	2533	11	NA	NA	0	1655	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	83.2488056152377	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTTGAACAAATATTTCAC	-1	True	NA	NA	False	AAAAAG	-2	NA	90082879	90056952	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_90056986_90058611_90060287_90060628_90060701_90063099_90063154_90063280_90063321_90063405_90063462_90065897_90065976_90068997_90069055_90069153_90069238_90078372_90078448_90082025_90082103_90082618
H1_mix_00084811	chr8	-	2260	3	FSM	ENSG00000253738.3	ENST00000657110.1	2377	3	117	0	117	0	multi-exon	FALSE	canonical	1	4	junction_1	160	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGGCTTGTTATTCCTCA	NA	False	NA	NA	False	AAAACA	-29	NA	91070466	91062909	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_91063747_91068935_91069823_91069930
H1_mix_00084812	chr8	-	7543	12	FSM	ENSG00000079102.16	ENST00000523629.5	7537	12	0	-6	0	-2	multi-exon	FALSE	canonical	2	2	junction_11	7.43900819835592	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGGTCAGTCTATTC	-1	True	NA	-1	True	AATAAA	-23	NA	92103226	91954968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_91960518_91970657_91970849_91975904_91975974_91986123_91986326_91986886_91986973_91991638_91991890_92005115_92005298_92011001_92011092_92014578_92014821_92017225_92017364_92075964_92076138_92102856
H1_mix_00084815	chr8	-	3759	6	NIC	ENSG00000205133.12	novel	1596	6	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	47.3142684610045	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGGCATTTACCATTTATG	-2	True	NA	-1	True	AATAAA	-26	NA	92966074	92883529	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_92886736_92891988_92892075_92916928_92917011_92921502_92921661_92954405_92954565_92966006
H1_mix_00084816	chr8	-	3482	4	FSM	ENSG00000205133.12	ENST00000537541.1	3510	4	30	-2	0	2	multi-exon	FALSE	canonical	3	6	junction_3	45.675181687895	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGGCATTTACCATTTATG	-3	True	NA	-1	True	AATAAA	-26	NA	92966114	92883529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_92886736_92891988_92892075_92916928_92917011_92966006
H1_mix_00084819	chr8	-	499	2	FSM	ENSG00000197275.14	ENST00000519348.1	506	2	8	-1	8	0	multi-exon	FALSE	canonical	1	1	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGTTAATAATTCCTTG	4461	False	NA	-1	True	AATAAA	-21	NA	94373082	94371959	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_94372388_94373011
H1_mix_00084821	chr8	-	1361	12	FSM	ENSG00000175305.18	ENST00000396133.7	1361	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	29.3755956507219	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTTGGAATTCACCAAGA	1432	False	NA	NA	False	ACTAAA	-18	NA	94895254	94881613	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_94881770_94882131_94882290_94882780_94882893_94885066_94885202_94885462_94885559_94887926_94888074_94890414_94890551_94892817_94892970_94893890_94893945_94894022_94894120_94894207_94894248_94895176
H1_mix_00084822	chr8	-	595	5	FSM	ENSG00000156467.10	ENST00000518406.5	595	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2664.83361347383	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGCTGGAGTTTTTGAA	2	True	NA	-48	True	AATAAA	-10	NA	96235539	96230941	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_96231133_96231378_96231516_96231773_96231941_96233155_96233228_96235511
H1_mix_00084823	chr8	-	5654	6	FSM	ENSG00000156469.9	ENST00000522822.5	1148	6	-4404	-102	-69	76	multi-exon	FALSE	canonical	3	464	junction_3	13.4402380931292	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTGACTTTTTCCTTCC	NA	False	NA	94	True	NA	NA	NA	96261679	96239321	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_96239686_96243918_96244081_96245859_96245932_96246306_96246455_96250905_96251096_96256961
H1_mix_00084824	chr8	-	788	5	FSM	ENSG00000156469.9	ENST00000524341.5	776	5	0	-12	0	7	multi-exon	FALSE	canonical	3	36	junction_1	187.522498650162	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGGTCTCAACTGATATTG	4532	False	NA	-1	True	AATAAA	-21	NA	96257070	96239416	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_96239686_96245859_96245932_96246306_96246455_96250905_96251096_96256961
H1_mix_00084825	chr8	-	899	6	NIC	ENSG00000156469.9	novel	1463	8	NA	NA	17	3	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	206.406976626276	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTCGGGTCTCAACTGAT	31	False	NA	-5	True	AATAAA	-17	NA	96261571	96239420	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_96239686_96245859_96245932_96246306_96246455_96250905_96251096_96256961_96257115_96261500
H1_mix_00084826	chr8	-	590	2	FSM	ENSG00000156482.11	ENST00000521534.1	573	2	0	-17	0	17	multi-exon	FALSE	canonical	3	5892	junction_1	0	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTCTATTTTTGTTTC	3017	False	NA	1	True	AATAAA	-38	NA	98043085	98041701	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_98041851_98042644
H1_mix_00084827	chr8	-	2117	5	FSM	ENSG00000156482.11	ENST00000521726.1	1129	5	-981	-7	-981	0	multi-exon	FALSE	canonical	2	141	junction_4	2736.49323953121	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTTCACCTACAAAATTT	NA	False	NA	-97	True	AGTAAA	-1	NA	98047450	98041799	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_98041851_98042644_98042776_98044942_98045089_98045346_98045400_98045714
H1_mix_00084828	chr8	-	1012	7	NNC	ENSG00000132541.11	novel	987	6	NA	NA	0	17203	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	210.298002843584	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGCTGTGGAACGTTCA	8	True	NA	NA	False	NA	NA	NA	98117159	98085140	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_98085179_98102344_98102905_98104488_98104545_98105937_98106007_98106271_98106327_98108645_98108752_98117031
H1_mix_00084829	chr8	-	376	2	FSM	ENSG00000132541.11	ENST00000519155.1	271	2	-105	0	-48	0	multi-exon	FALSE	canonical	2	21	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTGGGAGTCAACTGTC	NA	False	NA	NA	False	AAGAAA	-33	NA	98117219	98113637	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_98113826_98117031
H1_mix_00084830	chr8	-	381	4	FSM	ENSG00000104361.10	ENST00000520735.1	381	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	6.48074069840786	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAGAAAAGAAAGGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	98252601	98217202	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_98217263_98222478_98222601_98236154_98236215_98252462
H1_mix_00084831	chr8	-	468	2	FSM	ENSG00000104375.17	ENST00000520440.1	697	2	1	228	1	-228	multi-exon	FALSE	canonical	3	94	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATACAATTATAGACCATAT	NA	False	NA	NA	False	NA	NA	NA	98548161	98526642	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_98526918_98547968
H1_mix_00084833	chr8	-	473	5	NNC	ENSG00000164919.11	novel	744	4	NA	NA	0	44806	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1676.31843633601	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGTTGTAATCCTAGTCT	0	True	NA	NA	False	NA	NA	NA	99893680	99828393	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_99828434_99878148_99878266_99887489_99887619_99891907_99892053_99893638
H1_mix_00084834	chr8	-	472	5	NNC	ENSG00000164919.11	novel	744	4	NA	NA	0	44806	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1676.31843633601	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGTTGTAATCCTAGTCT	0	True	NA	NA	False	NA	NA	NA	99893680	99828393	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_99828433_99878148_99878266_99887489_99887619_99891907_99892053_99893638
H1_mix_00084836	chr8	-	4639	10	NIC	ENSG00000034677.13	novel	4330	11	NA	NA	-434	-1	intron_retention	FALSE	canonical	3	16	junction_9	19.6757668838888	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCTGGTGTGTACACAAG	9766	False	NA	-4	True	AATAAA	-23	NA	100303693	100257060	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_100259247_100259853_100259998_100261541_100261756_100264033_100264196_100264670_100264786_100268784_100268948_100269868_100270014_100274952_100275162_100287500_100288268_100303159
H1_mix_00084837	chr8	-	549	3	FSM	ENSG00000034677.13	ENST00000522369.5	612	3	63	0	44	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTGACAATGGATTAACT	183	False	NA	NA	False	NA	NA	NA	100336141	100287834	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_100288268_100313290_100313373_100336107
H1_mix_00084839	chr8	-	3763	5	NIC	ENSG00000186106.11	novel	2649	5	NA	NA	1117	4	combination_of_known_junctions	FALSE	canonical	1	2	junction_4	38.622370460654	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTCTCTTTTTTTTTTTT	4025	False	NA	2	True	AATAAA	-25	NA	100555737	100520767	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_100522772_100527844_100528004_100529522_100529861_100533208_100533312_100554578
H1_mix_00084841	chr8	-	990	1	FSM	ENSG00000251013.1	ENST00000515313.1	990	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGCTCGACAACCAGCCC	8049	False	NA	NA	False	NA	NA	NA	100551713	100550723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_100550700_100551700
H1_mix_00084845	chr8	-	203	1	FSM	ENSG00000260368.1	ENST00000564694.1	1142	1	852	87	852	-87	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAACCATGAAGAGTTTTA	5907	False	NA	NA	False	TTTAAA	-8	NA	100913536	100913333	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_100913300_100913500
H1_mix_00084854	chr8	-	604	4	FSM	ENSG00000120963.12	ENST00000517844.5	604	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	719.203417369214	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGATAAATGGTTTTAGAA	2	True	NA	-24	True	AATAAA	-25	NA	101204701	101198932	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_101199240_101199989_101200098_101201606_101201744_101204649
H1_mix_00084855	chr8	-	488	3	FSM	ENSG00000120963.12	ENST00000519103.1	488	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	784	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCACAGGATAAATGGTTTT	4580	False	NA	-28	True	AATAAA	-21	NA	101201657	101198936	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_101199240_101199989_101200124_101201606
H1_mix_00084856	chr8	-	421	3	FSM	ENSG00000048392.13	ENST00000519125.1	421	3	0	0	0	0	multi-exon	FALSE	canonical	3	471	junction_1	16	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATGTGTTTAAAAATGTG	NA	False	NA	NA	False	NA	NA	NA	102219015	102212775	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_102212890_102214053_102214159_102218813
H1_mix_00084857	chr8	-	573	3	FSM	ENSG00000048392.13	ENST00000517517.1	573	3	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_2	242.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTCACATCTTAGCCTT	-1	True	NA	NA	False	NA	NA	NA	102238797	102225974	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_102226035_102232148_102232305_102238440
H1_mix_00084858	chr8	-	9203	59	NNC	ENSG00000104517.13	novel	10895	59	NA	NA	4	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	99.7225878641396	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAGGGAATTTCAAAATA	208	False	NA	-58	True	NA	NA	NA	102412685	102253937	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_102254515_102257631_102257718_102258984_102259130_102261145_102261260_102261914_102262071_102264473_102264559_102265099_102265279_102266946_102267008_102268977_102269109_102270038_102270184_102271133_102271246_102272528_102272773_102275514_102275620_102275707_102275829_102276971_102277193_102278825_102278940_102279035_102279209_102280393_102280468_102281288_102281520_102285126_102285339_102285512_102285782_102286359_102286618_102287432_102287565_102288154_102288267_102289452_102289577_102293604_102293845_102293954_102294116_102294981_102295112_102295203_102295331_102295413_102295533_102295635_102295783_102296892_102296985_102297457_102297607_102298391_102298490_102298847_102298972_102299451_102299548_102299999_102300152_102304042_102304170_102305084_102305296_102311298_102311497_102311734_102311890_102312133_102312246_102312341_102312486_102313803_102313917_102314743_102314854_102323310_102323496_102326545_102326664_102327741_102327897_102329089_102329201_102329282_102329400_102342472_102342667_102345395_102345546_102346235_102346396_102346902_102347093_102360070_102360191_102360588_102360666_102361124_102361207_102361581_102361627_102412172
H1_mix_00084861	chr8	-	4632	13	FSM	ENSG00000155096.15	ENST00000683787.1	4316	13	29	-345	0	84	multi-exon	FALSE	canonical	0	0	junction_10	682.01313016849	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTAATTCCTTTTTTCTT	0	True	NA	4	True	ATTAAA	-31	NA	102864163	102826026	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_102828679_102829271_102829487_102829820_102829934_102833055_102833219_102834188_102834264_102834665_102834748_102836255_102836391_102838743_102838917_102839649_102839824_102843550_102843748_102849986_102850145_102858012_102858151_102863806
H1_mix_00084863	chr8	-	974	2	FSM	ENSG00000247081.8	ENST00000519801.1	977	2	3	0	1	0	multi-exon	FALSE	canonical	3	15	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACCTCCCTCTCTCCTTCC	NA	False	NA	NA	False	NA	NA	NA	103285904	103245777	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_103246685_103285837
H1_mix_00084866	chr8	-	668	5	FSM	ENSG00000253477.5	ENST00000517376.5	722	5	54	0	54	0	multi-exon	FALSE	canonical	1	1	junction_4	4.71036092035419	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTCTCTTCCTGGTGTTT	2740	False	NA	NA	False	NA	NA	NA	103499166	103483397	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_103483516_103487560_103487682_103489696_103489850_103498175_103498255_103498969
H1_mix_00084868	chr8	-	896	1	FSM	ENSG00000255105.1	ENST00000534173.1	291	1	-621	16	-621	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAATGTTGATACCAAAAT	NA	False	NA	NA	False	NA	NA	NA	103560010	103559114	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_103559100_103560000
H1_mix_00084869	chr8	-	614	1	FSM	ENSG00000253676.1	ENST00000524097.1	587	1	-77	50	-77	-50	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCATCTCAGGCAGGCATG	NA	False	NA	NA	False	NA	NA	NA	106698090	106697476	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_106697500_106698100
H1_mix_00084870	chr8	-	4406	9	FSM	ENSG00000154188.10	ENST00000517746.6	4230	9	-185	9	-48	2	multi-exon	FALSE	canonical	1	5	junction_8	4.32290411644765	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGCAACTTCATTTTAT	NA	False	NA	NA	False	AATAAA	-14	NA	107498103	107249490	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_107252016_107264220_107264352_107284681_107284849_107293935_107294038_107303239_107303368_107321895_107322129_107336149_107336272_107346941_107347098_107497261
H1_mix_00084873	chr8	-	1126	9	FSM	ENSG00000104408.11	ENST00000519627.2	1121	9	0	-5	0	0	multi-exon	FALSE	canonical	3	96	junction_8	1195.44651046168	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCAGTTTTCTTGCAT	-11	True	NA	-24	True	AATAAA	-18	NA	108248726	108201739	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108248612
H1_mix_00084874	chr8	-	1682	14	FSM	ENSG00000104408.11	ENST00000518345.2	1663	14	0	-19	0	0	multi-exon	FALSE	canonical	2	4	junction_13	1377.65083474921	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCAGTTTTCTTGCAT	NA	False	NA	-24	True	AATAAA	-18	NA	108248730	108201739	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108243292_108243464_108248612
H1_mix_00084878	chr8	-	2509	7	FSM	ENSG00000104408.11	ENST00000677746.1	2509	7	0	0	0	0	multi-exon	FALSE	canonical	3	3771	junction_1	203.992987352234	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTACGCCTGTAATTTCA	10	True	NA	NA	False	NA	NA	NA	108248705	108226482	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108248612
H1_mix_00084881	chr8	-	9960	7	FSM	ENSG00000104447.13	ENST00000395715.8	9964	7	0	4	0	-4	multi-exon	TRUE	canonical	1	2	junction_6	3.45205252953466	510	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATAACGGCGTTGGTATG	2	True	NA	-5	True	AATAAA	-17	NA	115668975	115408499	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_115415085_115418329_115418453_115587000_115587605_115603872_115605003_115619131_115620061_115623600_115623759_115668544
H1_mix_00084883	chr8	-	1306	9	NNC	ENSG00000147677.12	novel	3961	8	NA	NA	0	3701	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	557.323738952505	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCCAACTCATGTATATG	-10	True	NA	NA	False	NA	NA	NA	116755822	116638428	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_116638461_116644815_116645104_116646470_116646604_116648805_116648927_116655855_116656006_116657214_116657315_116658812_116658981_116726015_116726173_116755665
H1_mix_00084884	chr8	-	1301	9	NNC	ENSG00000147677.12	novel	3961	8	NA	NA	0	3701	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	557.323738952505	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCCAACTCATGTATATG	-10	True	NA	NA	False	NA	NA	NA	116755822	116638428	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_116638462_116644821_116645104_116646470_116646604_116648805_116648927_116655855_116656006_116657214_116657315_116658812_116658981_116726015_116726173_116755665
H1_mix_00084885	chr8	-	1291	9	NNC	ENSG00000147677.12	novel	3961	8	NA	NA	0	3701	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	557.323738952505	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCCAACTCATGTATATG	-11	True	NA	NA	False	NA	NA	NA	116755823	116638428	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_116638461_116644831_116645104_116646470_116646604_116648805_116648927_116655855_116656006_116657214_116657315_116658812_116658981_116726015_116726173_116755665
H1_mix_00084887	chr8	-	1304	6	ISM	ENSG00000164754.16	ENST00000520992.6	3603	14	-144	11002	-40	4980	5prime_fragment	FALSE	canonical	3	13	junction_5	509.947291393924	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACCAAGTGTTTTATACT	352	False	NA	NA	False	AATAAA	-38	NA	116874568	116856941	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_-_116857474_116858351_116858459_116861840_116861941_116863129_116863260_116866585_116866762_116874309
H1_mix_00084889	chr8	-	8863	5	FSM	ENSG00000177570.15	ENST00000524796.6	782	5	0	-8081	0	-11	multi-exon	FALSE	canonical	3	11	junction_1	4.55521678957215	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGTGTAAAAGCGTTTTGA	-6	True	NA	-9	True	ATTAAA	-17	NA	118621949	118189465	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_118197733_118379559_118379701_118439831_118439962_118580714_118580894_118621803
H1_mix_00084890	chr8	-	771	5	FSM	ENSG00000177570.15	ENST00000526765.6	780	5	9	0	9	0	multi-exon	FALSE	canonical	1	1	junction_4	9.21954445729289	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAGAAGGAAAAAGGGTGA	27	False	NA	NA	False	AATAAA	-15	NA	118622103	118375700	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_118375857_118379559_118379701_118439831_118439962_118580714_118580894_118621938
H1_mix_00084892	chr8	-	279	1	FSM	ENSG00000254037.2	ENST00000518830.2	497	1	80	138	80	-138	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGATAATCCCCTGATGG	NA	False	NA	NA	False	GGGGCT	-36	NA	119480695	119480416	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_119480400_119480700
H1_mix_00084893	chr8	-	757	8	FSM	ENSG00000136960.13	ENST00000520066.5	769	8	0	12	0	4	multi-exon	FALSE	canonical	1	1	junction_5	26.5422266571282	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTTTGCATTTATTGT	779	False	NA	NA	False	NA	NA	NA	119638814	119616264	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_119616385_119617163_119617244_119617465_119617564_119619243_119619305_119621393_119621520_119626618_119626721_119638424_119638528_119638747
H1_mix_00084894	chr8	-	4869	25	FSM	ENSG00000064313.13	ENST00000691880.1	4840	25	-7	-22	0	3	multi-exon	FALSE	canonical	0	0	junction_24	41.6368017970748	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTCTTTGTAGCTTTTT	-3	True	NA	-15	True	AATAAA	-20	NA	119832841	119730770	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_119732187_119742533_119742657_119744287_119744394_119746704_119746935_119756005_119756116_119758072_119758143_119760598_119760739_119762414_119762609_119778018_119778130_119781052_119781194_119783380_119783634_119785200_119785267_119788337_119788448_119788789_119788905_119789591_119789747_119791323_119791460_119793365_119793452_119795531_119795632_119796989_119797104_119797661_119797847_119801793_119802026_119803877_119804020_119806282_119806402_119831676_119831732_119832481
H1_mix_00084899	chr8	-	4994	8	FSM	ENSG00000172164.15	ENST00000648490.1	4994	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	56.5973966373229	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTGGACTTTTAAAAAAT	-6	True	NA	-101	True	NA	NA	NA	120812069	120535846	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_120538970_120541809_120542001_120548761_120548959_120551130_120551252_120575085_120575226_120632443_120632652_120693691_120693909_120811272
H1_mix_00084900	chr8	-	913	1	FSM	ENSG00000272384.1	ENST00000607710.1	860	1	-53	0	-53	0	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAATGGCCTGCACCTGTT	2348	False	NA	-13	True	ATTAAA	-22	NA	122780883	122779970	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_122780000_122780900
H1_mix_00084901	chr8	-	485	3	FSM	ENSG00000189376.12	ENST00000517760.1	485	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	99.5	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAATCACCAAGGCGGCCT	9768	False	NA	NA	False	NA	NA	NA	123231592	123226359	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_123226419_123226499_123226633_123231299
H1_mix_00084904	chr8	-	3108	19	FSM	ENSG00000156802.13	ENST00000521496.5	3133	19	0	25	0	-25	multi-exon	FALSE	canonical	3	161	junction_9	20.6242096743453	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCCCTACTAAAAATACAAA	-3	True	NA	NA	False	NA	NA	NA	123396401	123344537	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_123345070_123346085_123346273_123346617_123346751_123347091_123347407_123348182_123348274_123349284_123349445_123356388_123356478_123357561_123357737_123359220_123359337_123359576_123359686_123361538_123361647_123369057_123369176_123369820_123370025_123370902_123370991_123371235_123371339_123371669_123371836_123372636_123372687_123380528_123380678_123396186
H1_mix_00084905	chr8	-	4539	2	FSM	ENSG00000245149.5	ENST00000669597.1	3850	2	30	-719	-1	719	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAGAGAGGACAGAGTGAC	-2	True	NA	NA	False	NA	NA	NA	124474552	124463587	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_124467659_124474084
H1_mix_00084906	chr8	-	1144	13	FSM	ENSG00000147687.19	ENST00000523214.5	1134	13	0	-10	0	0	multi-exon	FALSE	canonical	2	2	junction_4	146.02936824108	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATACTATATATCGGTAC	-17	True	NA	NA	False	AATAAA	-25	NA	124539088	124488497	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_124488697_124493832_124493960_124495471_124495543_124503839_124503952_124504270_124504348_124508473_124508515_124508602_124508689_124515745_124515789_124515886_124516031_124518817_124518882_124522150_124522201_124522936_124523003_124539024
H1_mix_00084907	chr8	-	853	11	NIC	ENSG00000147687.19	novel	1029	12	NA	NA	-3	-28	combination_of_known_junctions	FALSE	canonical	3	16	junction_10	146.86783173997	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCACTGGAATTAGCCAATA	12	True	NA	NA	False	NA	NA	NA	124539059	124488657	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_124488697_124493832_124493960_124495471_124495543_124504270_124504348_124508473_124508515_124508602_124508689_124515745_124515789_124515886_124516031_124518741_124518882_124522150_124522201_124539024
H1_mix_00084908	chr8	-	926	12	NIC	ENSG00000147687.19	novel	1029	12	NA	NA	4	-28	combination_of_known_junctions	FALSE	canonical	3	81	junction_8	99.3961936181921	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCACTGGAATTAGCCAATA	5	True	NA	NA	False	NA	NA	NA	124539066	124488657	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_124488697_124493832_124493960_124495471_124495543_124504270_124504348_124508473_124508515_124508602_124508689_124515745_124515789_124515886_124516031_124518741_124518882_124522150_124522201_124522936_124523003_124539024
H1_mix_00084910	chr8	-	4876	13	NNC	ENSG00000170873.19	novel	4994	14	NA	NA	0	80	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_4	8.74007373475126	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTACGTAGAAAAGTGACAA	-5	True	NA	68	True	NA	NA	NA	124728473	124550703	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_124553693_124555741_124555905_124556231_124556406_124562781_124562990_124565661_124565760_124567070_124567179_124568378_124568537_124585086_124585162_124589619_124589712_124591150_124591236_124699525_124699600_124704129_124704192_124727883
H1_mix_00084911	chr8	-	4464	14	FSM	ENSG00000170873.19	ENST00000378017.7	4458	14	0	-6	0	0	multi-exon	FALSE	canonical	0	0	junction_3	12.600366295042	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGTATTTCAAGTCTTG	929	False	NA	-12	True	AATAAA	-20	NA	124728018	124550783	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_124553693_124555741_124555905_124556231_124556406_124558712_124558833_124562781_124562993_124565661_124565760_124567070_124567179_124568378_124568537_124585086_124585162_124589619_124589712_124591150_124591236_124699525_124699600_124704129_124704192_124727883
H1_mix_00084912	chr8	-	2107	8	FSM	ENSG00000170873.19	ENST00000524090.5	2166	8	59	0	59	0	multi-exon	FALSE	canonical	3	11	junction_3	8.80630571852711	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTGTAGGCAACTCGGA	NA	False	NA	NA	False	AATAAA	-44	NA	124568745	124552901	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_124553693_124555741_124555905_124556231_124556406_124557680_124557876_124562781_124562993_124565661_124565760_124567070_124567179_124568378
H1_mix_00084913	chr8	-	976	3	FSM	ENSG00000164961.16	ENST00000519042.2	976	3	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_2	9.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGTCTCGCTTATGATTCA	NA	False	NA	-1	True	AGTAAA	-22	NA	125032714	125024259	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_125024674_125028619_125028708_125032240
H1_mix_00084914	chr8	-	3667	27	FSM	ENSG00000164961.16	ENST00000517845.5	3667	27	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_26	74.3215069177997	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAAAGTCGTCTCGCTTA	-17	True	NA	-8	True	AGTAAA	-15	NA	125091783	125024266	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_125024674_125028619_125028708_125032240_125032395_125037236_125037334_125038829_125038960_125039794_125039899_125043824_125043905_125043991_125044095_125044535_125044699_125047206_125047332_125049005_125049186_125050563_125050666_125055590_125055672_125056676_125056818_125057555_125057667_125059221_125059298_125059375_125059543_125061081_125061195_125063521_125063652_125067591_125067720_125073152_125073325_125074997_125075112_125076347_125076501_125078737_125078931_125081660_125081762_125082382_125082468_125091614
H1_mix_00084915	chr8	-	859	7	FSM	ENSG00000164961.16	ENST00000523297.5	859	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_6	114.402311553958	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTTAAATAATACCCTGG	94	False	NA	NA	False	NA	NA	NA	125091724	125075040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_125075112_125076347_125076501_125078737_125078931_125081660_125081762_125082382_125082468_125083112_125083259_125091614
H1_mix_00084918	chr8	-	6083	1	FSM	ENSG00000168672.4	ENST00000652209.1	4831	1	-789	-463	-42	5	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTCCACTTGAATACC	NA	False	NA	-14	True	AATAAA	-23	NA	126558520	126552437	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_126552400_126558500
H1_mix_00084919	chr8	-	2709	3	NIC	ENSG00000168672.4	novel	5488	2	NA	NA	12	-6	intron_retention	FALSE	canonical	3	102	junction_1	101	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCACTGGATTTTTTTCC	6	True	NA	-25	True	AATAAA	-12	NA	126558466	126552448	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_126553504_126556264_126557486_126558033
H1_mix_00084920	chr8	-	238	2	Intergenic	novelGene_1502	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAGGATTTTCACAAGG	NA	False	NA	NA	False	NA	NA	NA	127437455	127431900	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_-_127432001_127437317
H1_mix_00084921	chr8	-	628	3	Intergenic	novelGene_1504	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	8	junction_1	4.5	54	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGGGTACCTATTCTGT	69	False	NA	-25	True	ATTAAA	-6	NA	128617197	128589880	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_-_128590213_128615120_128615251_128617031
H1_mix_00084926	chr8	-	3659	17	NIC	ENSG00000155897.10	novel	4421	18	NA	NA	87	-9	combination_of_known_splicesites	FALSE	canonical	3	10	junction_7	8.804961314509	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAACAAGGATGGTTTCG	1313	False	NA	NA	False	AATAAA	-28	NA	131040246	130780309	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_130780878_130783690_130783806_130785382_130785476_130800425_130800573_130814068_130814228_130821341_130821421_130836276_130836450_130849601_130849804_130867845_130867947_130884563_130884762_130903771_130904043_130909707_130909867_130937072_130937201_130943350_130943463_130951867_130951999_130990392_130990543_131039373
H1_mix_00084927	chr8	-	2885	19	NIC	ENSG00000258417.3	novel	2413	18	NA	NA	-201	22	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	13.6414627578145	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTGATTGTTTTGCTTT	NA	False	NA	-3	True	AATAAA	-15	NA	132085856	132024215	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_132024777_132029072_132029180_132031880_132032053_132033038_132033165_132034780_132034835_132036370_132036419_132037437_132037489_132038789_132038832_132038994_132039124_132041043_132041157_132041524_132041700_132044432_132044490_132045817_132045884_132054980_132055074_132076054_132076130_132076474_132076544_132077725_132077972_132079717_132079967_132085404
H1_mix_00084928	chr8	-	4285	8	NIC	ENSG00000132297.13	novel	4188	17	NA	NA	-4810	340	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	8.77380144730519	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGAACAGACTTTATCCT	NA	False	NA	-15	True	ATTAAA	-21	NA	132085914	132061139	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_132064039_132065885_132065969_132071339_132071494_132076054_132076130_132076474_132076544_132077725_132077972_132079717_132079967_132085404
H1_mix_00084929	chr8	-	554	4	FSM	ENSG00000129295.10	ENST00000521430.5	554	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	12.2292908852294	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCATTAAAAACTTGCAGCA	86	False	NA	NA	False	NA	NA	NA	132675525	132638051	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_132638108_132656829_132656908_132661459_132661628_132675273
H1_mix_00084934	chr8	-	1540	4	Intergenic	novelGene_1511	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_1	51.3290041464538	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGAATCAATACTTTATTT	NA	False	NA	NA	False	AATAAA	-15	NA	137413588	137378783	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_-_137379996_137384218_137384249_137384632_137384678_137413335
H1_mix_00084940	chr8	-	13528	2	FSM	ENSG00000123908.12	ENST00000520628.1	350	2	-30	-13148	-30	1210	multi-exon	FALSE	canonical	3	113	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGATATGGCCTTTGT	9835	False	NA	NA	False	AATATA	-2	NA	140532736	140518945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_140532153_140532415
H1_mix_00084942	chr8	-	4658	31	FSM	ENSG00000169398.19	ENST00000517887.5	4661	31	18	-15	18	2	multi-exon	FALSE	canonical	3	34	junction_30	92.1690234780042	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTCTTTTGGTTCTGTT	-6	True	NA	-5	True	ATTAAA	-33	NA	140921201	140658386	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_140659679_140664916_140664998_140668268_140668425_140674297_140674405_140675459_140675500_140686631_140686695_140700890_140701023_140702569_140702708_140706118_140706206_140717597_140717710_140735250_140735456_140739017_140739108_140743229_140743331_140744651_140744768_140746759_140746861_140752231_140752317_140761164_140761263_140764233_140764291_140789473_140789527_140793353_140793385_140800458_140800577_140803542_140803651_140818276_140818355_140818879_140819021_140830471_140830527_140846259_140846323_140846598_140846679_140864311_140864400_140879470_140879638_140890542_140890770_140920813
H1_mix_00084944	chr8	-	4403	32	NIC	ENSG00000169398.19	novel	4414	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	122.450907574705	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTCTTGTTGTAATATC	-7	True	NA	-23	True	ATTAAA	-15	NA	141001266	140658404	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_140659679_140664916_140664998_140668268_140668425_140669726_140669736_140674297_140674405_140675459_140675500_140686631_140686695_140700890_140701023_140702569_140702708_140706118_140706206_140717597_140717710_140735250_140735456_140739017_140739108_140743229_140743331_140744651_140744768_140746759_140746861_140752231_140752317_140761164_140761263_140764233_140764291_140789473_140789527_140793353_140793385_140800458_140800577_140803542_140803651_140818276_140818355_140818879_140819021_140830471_140830527_140846259_140846323_140846598_140846679_140864311_140864400_140879470_140879638_140890542_140890770_141001124
H1_mix_00084945	chr8	-	4101	29	NIC	ENSG00000169398.19	novel	4955	32	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	1	11	junction_27	106.302778008126	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTAAAGTTCTTGTTGTA	26	True	NA	-28	True	ATTAAA	-10	NA	141001233	140658409	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_140659679_140664916_140664998_140668268_140668425_140674297_140674405_140675459_140675500_140686631_140686695_140700890_140701023_140702569_140702708_140706118_140706206_140717597_140717710_140735250_140735456_140739017_140739108_140743229_140743331_140744651_140744768_140746759_140746861_140752231_140752317_140761164_140761263_140764233_140764291_140789473_140789527_140793353_140793385_140800458_140800577_140803542_140803651_140818276_140818355_140818879_140819021_140830471_140830527_140846259_140846323_140846598_140846679_140890542_140890770_141001124
H1_mix_00084952	chr8	-	863	3	FSM	ENSG00000169398.19	ENST00000519881.5	863	3	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_2	79	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGTGTGTATGTATA	-25	True	NA	-1	True	AATAAA	-17	NA	141001284	140879161	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_140879638_140890542_140890770_141001124
H1_mix_00084960	chr8	-	2010	15	NIC	ENSG00000184428.13	novel	1982	15	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_14	101.899535357736	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGCAAGTGCTTGTACA	4	True	NA	-27	True	AATAAA	-2	NA	143334865	143309355	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_143309544_143310067_143310218_143315726_143315822_143315998_143316127_143317722_143317838_143318017_143318087_143321200_143321387_143323998_143324143_143324484_143324630_143325345_143325534_143326221_143326345_143329349_143329472_143331223_143331340_143332486_143332602_143334739
H1_mix_00084966	chr8	-	1213	7	FSM	ENSG00000147813.16	ENST00000464332.5	1212	7	0	-1	0	0	multi-exon	FALSE	canonical	3	369	junction_3	31.8171861316071	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGTCCTGTGTTGTTTG	4513	False	NA	-5	True	GGGGCT	-37	NA	143576801	143574785	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143574901_143574985_143575094_143575190_143575346_143575422_143575526_143575621_143575703_143576077_143576573_143576645
H1_mix_00084967	chr8	-	1775	12	FSM	ENSG00000147813.16	ENST00000340490.7	1774	12	0	-1	0	0	multi-exon	FALSE	canonical	3	306	junction_7	43.9513254437732	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGTCCTGTGTTGTTTG	-6	True	NA	-5	True	GGGGCT	-37	NA	143578339	143574785	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143575094_143575190_143575346_143575422_143575526_143575621_143575703_143576077_143576163_143576431_143576573_143576645_143576843_143577061_143577178_143577268_143577400_143577656_143577740_143577815_143577944_143578092
H1_mix_00084969	chr8	-	533	3	FSM	ENSG00000104529.19	ENST00000530109.5	533	3	0	0	0	0	multi-exon	FALSE	canonical	3	3516	junction_1	18	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	9203	False	NA	-34	True	ATTAAA	-14	NA	143580740	143579727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143579831_143580011_143580207_143580505
H1_mix_00084974	chr8	-	996	2	FSM	ENSG00000104529.19	ENST00000526710.1	996	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCCCTACTGTTACTTC	-3	True	NA	NA	False	NA	NA	NA	143597442	143589180	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143590082_143597347
H1_mix_00084978	chr8	-	763	2	FSM	ENSG00000104522.16	ENST00000524719.1	762	2	0	-1	0	1	multi-exon	FALSE	canonical	3	813	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTTGGCAGCTCTGTGC	4441	False	NA	-4	True	AATAAA	-18	NA	143613607	143612616	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143613296_143613523
H1_mix_00084986	chr8	-	1786	11	NIC	ENSG00000179950.14	novel	1821	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	220	junction_10	529.658012306054	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCCGTGTGTCTGCCGTCG	6	True	NA	-31	True	GATAAA	-25	NA	143829320	143816376	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143821596_143821687_143821817_143821914_143824312_143824397_143829279
H1_mix_00084987	chr8	-	1837	12	NIC	ENSG00000179950.14	novel	1868	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	220	junction_11	568.256067875818	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCCGTGTGTCTGCCGTCG	6	True	NA	-31	True	GATAAA	-25	NA	143829320	143816376	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143820665_143820717_143821596_143821687_143821817_143821914_143824312_143824397_143829279
H1_mix_00085008	chr8	-	1599	16	NIC	ENSG00000185000.12	novel	3653	17	NA	NA	46	-41	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	47.8699163242311	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTCTGATGCCAGCTGGG	9855	False	NA	-89	True	GGGGCT	-41	NA	144326621	144316365	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_144316710_144316852_144316916_144317021_144317110_144317186_144317253_144317332_144317446_144317543_144317589_144317670_144317713_144317783_144317823_144317913_144318018_144318094_144318170_144318260_144318363_144318460_144318567_144318698_144318752_144318834_144318921_144321320_144321409_144326436
H1_mix_00085014	chr8	-	4484	37	NNC	ENSG00000071894.17	novel	4462	37	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_13	113.339498062183	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGGATGCCGTCACCACC	27	True	NA	-89	True	NA	NA	NA	144409284	144393315	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_144393366_144393451_144393591_144393666_144393797_144393882_144394039_144394112_144394161_144394233_144394301_144394378_144394556_144394643_144394797_144394881_144395024_144395097_144395183_144395264_144395356_144395434_144395552_144396347_144396525_144396597_144396742_144396839_144396930_144397206_144397414_144397486_144397662_144397742_144397880_144397953_144398133_144398301_144398444_144398524_144398639_144398778_144398869_144398957_144399039_144399127_144399203_144399275_144399374_144399451_144399504_144399587_144399711_144399780_144399869_144399991_144400086_144400165_144400277_144400353_144400494_144400670_144400818_144400923_144401076_144401210_144401292_144401429_144401564_144401645_144401674_144409014
H1_mix_00085022	chr8	-	2053	3	FSM	ENSG00000160948.14	ENST00000526977.5	2036	3	0	-17	0	1	multi-exon	FALSE	canonical	3	341	junction_1	24	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCCTGCCCTGTGTATT	-9	True	NA	-8	True	AATAAA	-35	NA	144426983	144423599	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144425052_144425682_144426209_144426908
H1_mix_00085024	chr8	-	2140	7	FSM	ENSG00000160948.14	ENST00000526204.5	2120	7	0	-20	0	1	multi-exon	FALSE	canonical	3	8	junction_4	140.396363517325	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCCTGCCCTGTGTATT	-9	True	NA	-8	True	AATAAA	-35	NA	144426983	144423599	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144423923_144424040_144424133_144424214_144424820_144424945_144425773_144425874_144426064_144426179_144426209_144426908
H1_mix_00085026	chr8	-	1609	7	FSM	ENSG00000160948.14	ENST00000527797.6	1609	7	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_3	16.5998661306516	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGAACTTTGGGGGCCGG	3512	False	NA	-80	True	NA	NA	NA	144426998	144423671	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144423923_144424040_144424133_144424214_144424269_144424717_144425773_144426025_144426064_144426179_144426209_144426908
H1_mix_00085027	chr8	-	4510	26	NNC	ENSG00000160949.18	novel	4531	26	NA	NA	28	10	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_8	78.1287552697469	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGGCTGCCTGGCAGGC	17	True	NA	2	True	AATAAA	-25	NA	144444412	144428764	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_144429337_144430403_144430538_144431077_144431152_144432284_144432461_144433587_144433760_144433977_144434280_144434810_144434890_144435016_144435168_144435473_144435551_144435657_144436419_144436557_144436682_144436756_144436921_144437026_144437100_144438470_144438561_144438652_144438736_144440020_144440211_144440350_144440477_144440717_144440871_144440965_144441112_144442036_144442152_144442240_144442413_144442676_144442807_144443137_144443322_144443881_144444025_144444179_144444276_144444389
H1_mix_00085029	chr8	-	2333	3	ISM	ENSG00000160957.15	ENST00000301323.7	781	5	-1155	-4	646	-2	intron_retention	FALSE	canonical	3	445	junction_1	13.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGGCCCTCTTGGCCAAT	3997	False	NA	-8	True	AATAAA	-19	NA	144513868	144511289	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_-_144511556_144511680_144511790_144511910
H1_mix_00085030	chr8	-	3950	19	NNC	ENSG00000160957.15	novel	3896	20	NA	NA	20	-2	intron_retention	FALSE	canonical	3	35	junction_3	89.8543402910277	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGGCCCTCTTGGCCAAT	3	True	NA	-8	True	AATAAA	-19	NA	144517813	144511289	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_144511556_144511680_144511790_144511910_144512063_144512143_144512325_144512391_144512562_144512641_144512772_144512846_144513139_144513217_144513481_144513570_144513713_144513927_144514108_144514188_144514363_144514441_144514526_144514935_144515073_144515149_144515243_144515325_144515458_144515763_144515891_144515987_144516765_144517049_144517191_144517413
H1_mix_00085032	chr8	-	2729	4	NNC	ENSG00000213563.7	novel	2455	3	NA	NA	0	106	intron_retention	FALSE	canonical	3	30	junction_3	91.6987822529103	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGGCCAGCAGGAGCAGG	-30	True	NA	NA	False	AAAAAG	-29	NA	144529111	144525626	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_144527788_144528023_144528073_144528267_144528436_144528760
H1_mix_00085033	chr8	-	986	7	NNC	ENSG00000161016.18	novel	965	6	NA	NA	0	86038	intron_retention	FALSE	non_canonical	0	0	junction_1	11532.8514025033	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGGGCTCACGCCTGTAA	20	True	NA	NA	False	NA	NA	NA	144792384	144703726	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_144703755_144789770_144789963_144790354_144790471_144791276_144791496_144791772_144791915_144791991_144792141_144792244
H1_mix_00085035	chr8	-	2342	2	FSM	ENSG00000198169.9	ENST00000530353.1	2342	2	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAATGGATGGGATGCTAA	5023	False	NA	NA	False	NA	NA	NA	144756417	144753680	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144753797_144754191
H1_mix_00085037	chr8	-	1007	3	FSM	ENSG00000161016.18	ENST00000525232.5	1007	3	0	0	0	0	multi-exon	FALSE	canonical	3	7798	junction_2	4772	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTACAACAGGCACAACAG	-17	True	NA	NA	False	NA	NA	NA	144792421	144791112	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144791915_144791991_144792141_144792365
H1_mix_00085042	chr8	+	3397	1	Intergenic	novelGene_1414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCCATCTCAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	451485	454882	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_451500_454900
H1_mix_00085043	chr8	+	245	1	Intergenic	novelGene_1419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTTCACCTTCTGCCATC	NA	False	NA	NA	False	NA	NA	NA	7148545	7148790	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_7148500_7148800
H1_mix_00085045	chr8	+	299	1	Intergenic	novelGene_1427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGGACAGGTTGGGAGAAA	NA	False	NA	NA	False	NA	NA	NA	8056988	8057287	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_8057000_8057300
H1_mix_00085046	chr8	+	2795	1	Intergenic	novelGene_1433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCACACACAAAAAAAACAGT	NA	False	NA	NA	False	NA	NA	NA	11165117	11167912	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_11165100_11167900
H1_mix_00085047	chr8	+	4362	1	Intergenic	novelGene_1442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTGTTGTTGTTT	NA	False	NA	77	True	CATAAA	-28	NA	12539159	12543521	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_12539200_12543500
H1_mix_00085048	chr8	+	3181	1	Intergenic	novelGene_1448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-38	NA	12609101	12612282	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_12609100_12612300
H1_mix_00085049	chr8	+	253	1	Intergenic	novelGene_1449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTACTACATTCCTTTTTG	NA	False	NA	NA	False	NA	NA	NA	12624628	12624881	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_12624600_12624900
H1_mix_00085050	chr8	+	1096	1	Intergenic	novelGene_1452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCGAGACTCTGTCTCAAA	2567	False	NA	NA	False	NA	NA	NA	16769268	16770364	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_16769300_16770400
H1_mix_00085051	chr8	+	1493	1	Intergenic	novelGene_1453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAAATTGCCAGTGTCCT	NA	False	NA	NA	False	AATAAA	-16	NA	22256117	22257610	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_22256100_22257600
H1_mix_00085052	chr8	+	273	1	Intergenic	novelGene_1454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTCAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	25400221	25400494	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_25400200_25400500
H1_mix_00085053	chr8	+	422	1	Intergenic	novelGene_1456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCAGACACACATGCCCG	NA	False	NA	NA	False	NA	NA	NA	28412542	28412964	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_28412500_28413000
H1_mix_00085054	chr8	+	2951	1	Intergenic	novelGene_1469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAGGAGACAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56176064	56179015	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_56176100_56179000
H1_mix_00085055	chr8	+	224	1	Intergenic	novelGene_1473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTTCATTGAATTTCTT	NA	False	NA	NA	False	NA	NA	NA	69690076	69690300	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_69690100_69690300
H1_mix_00085056	chr8	+	765	1	Intergenic	novelGene_1474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAAGGAGCAAAGGATCAT	NA	False	NA	NA	False	NA	NA	NA	71613588	71614353	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_71613600_71614400
H1_mix_00085057	chr8	+	292	1	Intergenic	novelGene_1477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCATCACGAGGTGGAT	NA	False	NA	NA	False	NA	NA	NA	79388357	79388649	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_79388400_79388600
H1_mix_00085059	chr8	+	219	1	Intergenic	novelGene_1480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACATCGTGGCTTCTGGG	NA	False	NA	NA	False	NA	NA	NA	80644462	80644681	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_80644500_80644700
H1_mix_00085060	chr8	+	250	1	Intergenic	novelGene_1482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTTCTCTGGCTCTCCTC	NA	False	NA	NA	False	NA	NA	NA	82291330	82291580	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_82291300_82291600
H1_mix_00085061	chr8	+	732	1	Intergenic	novelGene_1486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGTGTCAACCGCCTCT	NA	False	NA	NA	False	NA	NA	NA	94640017	94640749	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_94640000_94640700
H1_mix_00085063	chr8	+	668	1	Intergenic	novelGene_1491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAGATTTTTGGAAGTT	NA	False	NA	NA	False	NA	NA	NA	113510833	113511501	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_113510800_113511500
H1_mix_00085064	chr8	+	227	1	Intergenic	novelGene_1494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCAAATGCCTCAACTGC	NA	False	NA	NA	False	NA	NA	NA	114243314	114243541	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_114243300_114243500
H1_mix_00085066	chr8	+	824	1	Intergenic	novelGene_1497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATAGACGCTCCTTTTTA	NA	False	NA	NA	False	NA	NA	NA	115216054	115216878	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_115216100_115216900
H1_mix_00085067	chr8	+	523	1	Intergenic	novelGene_1505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGAATAATATGGGAGGCC	NA	False	NA	NA	False	NA	NA	NA	128613250	128613773	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_128613200_128613800
H1_mix_00085071	chr8	+	2325	6	FSM	ENSG00000172748.14	ENST00000308811.8	2783	6	0	458	0	-455	multi-exon	FALSE	canonical	0	0	junction_5	2.4	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCATAGTGGAGAAGTTAT	135	False	NA	NA	False	NA	NA	NA	232199	246884	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_232416_240823_240908_242886_243014_243721_243806_244618_244702_245153
H1_mix_00085072	chr8	+	500	1	FSM	ENSG00000272812.1	ENST00000609090.1	574	1	0	74	0	-74	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGACCTGGATTGTCCTAG	675	False	NA	NA	False	NA	NA	NA	233118	233618	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_233100_233600
H1_mix_00085073	chr8	+	3075	1	FSM	ENSG00000273402.1	ENST00000610248.1	625	1	-2511	61	-2511	-61	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATTTACTATTTATGTAT	2090	False	NA	NA	False	GATAAA	-10	NA	234533	237608	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_234500_237600
H1_mix_00085074	chr8	+	2198	9	FSM	ENSG00000147364.17	ENST00000352684.2	2360	9	162	0	12	0	multi-exon	FALSE	canonical	2	8	junction_3	12.9801531192818	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAATAGGACTAAAAAAAG	15	False	NA	NA	False	AATAAA	-20	NA	406969	469871	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_407067_413072_413214_431340_431445_435614_435708_449989_450084_451268_451454_458368_458552_463006_463151_468714
H1_mix_00085075	chr8	+	632	2	FSM	ENSG00000198010.13	ENST00000522499.1	632	2	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCCCCTCAATTCTAAGA	8361	False	NA	NA	False	AATAAA	-15	NA	1676536	1678763	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_1676619_1678213
H1_mix_00085076	chr8	+	719	2	FSM	ENSG00000182372.10	ENST00000524258.2	835	2	116	0	106	0	multi-exon	FALSE	canonical	1	3	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCACCATCTCTTTGCCT	126	False	NA	NA	False	NA	NA	NA	1755893	1771461	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_1756083_1770931
H1_mix_00085077	chr8	+	6075	29	NIC	ENSG00000283239.1	novel	5844	28	NA	NA	-73	6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	33.0379149846145	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGCAGTAGGATGAGTT	4	True	NA	22	True	AATAAA	-14	NA	1763814	1958633	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_1763886_1770931_1771598_1843352_1843437_1857959_1858116_1859896_1860185_1864369_1864437_1866525_1866603_1869193_1869251_1876570_1876735_1882634_1882750_1885600_1885708_1893568_1893647_1894392_1894573_1896332_1896450_1898432_1898526_1903280_1903452_1905570_1905717_1909294_1909471_1922963_1923080_1923467_1923596_1923773_1923875_1925282_1925405_1926376_1926464_1928426_1928651_1929285_1929444_1933799_1933943_1945480_1945656_1952704_1952828_1956748
H1_mix_00085078	chr8	+	504	2	NNC	ENSG00000182372.10	novel	1069	2	NA	NA	1316	200	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCACTTTAGTAGCATGAG	NA	False	NA	NA	False	NA	NA	NA	1801310	1801911	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_1801789_1801885
H1_mix_00085079	chr8	+	1626	5	NIC	ENSG00000104728.16	novel	5472	28	NA	NA	0	-1763	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	25.9843703021643	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTGTGGATTAAAGCGA	17	False	NA	NA	False	TTTAAA	-21	NA	1823987	1867517	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_1824114_1857959_1858116_1859896_1860185_1864372_1864437_1866525
H1_mix_00085080	chr8	+	6022	6	NNC	ENSG00000104728.16	novel	2176	12	NA	NA	-6216	3431	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	25.772853935876	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTATAACCTCTGGAGGGA	NA	False	NA	NA	False	NA	NA	NA	1852538	1874562	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_1852604_1857959_1858116_1859896_1860185_1864369_1864437_1866525_1866603_1869193
H1_mix_00085081	chr8	+	975	3	FSM	ENSG00000036448.10	ENST00000520298.5	975	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAGTTTAAAAATCACC	NA	False	NA	-9	True	NA	NA	NA	2140742	2145438	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_2140887_2143400_2143457_2144663
H1_mix_00085082	chr8	+	2549	7	FSM	ENSG00000155189.12	ENST00000523234.5	2525	7	-24	0	0	0	multi-exon	FALSE	canonical	2	49	junction_1	351.662440732903	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAACATACCAGTTGGATC	-10	True	NA	-94	True	AATATA	-14	NA	6708641	6758885	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_6708888_6730710_6730827_6732560_6732651_6741660_6741752_6747669_6747829_6755050_6755175_6757162
H1_mix_00085083	chr8	+	2954	2	NIC	ENSG00000284606.1	novel	3297	4	NA	NA	1	11	combination_of_known_splicesites	FALSE	canonical	1	6	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATCTAGTGTCTGAGGAG	124	False	NA	4	True	AATAAA	-17	NA	8065646	8180538	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_8065817_8177754
H1_mix_00085084	chr8	+	914	7	FSM	ENSG00000173295.9	ENST00000523992.2	894	7	-20	0	-10	0	multi-exon	FALSE	canonical	1	1	junction_1	7.7028133388609	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCCCCCACCCCAGCCT	-6	True	NA	NA	False	NA	NA	NA	8228584	8237275	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_8228701_8230842_8230906_8232793_8232875_8234482_8234585_8235815_8235950_8236031_8236300_8237125
H1_mix_00085086	chr8	+	2829	2	FSM	ENSG00000173295.9	ENST00000310542.3	2829	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTCGTGTTGTCTGTTG	NA	False	NA	7	True	ATTAAA	-17	NA	8240368	8244863	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_8242433_8244098
H1_mix_00085087	chr8	+	1746	7	NIC	ENSG00000104626.15	novel	2107	8	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_6	66.285786979982	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCATTCTCATTTGTTTT	1	True	NA	31	True	AATAAA	-14	NA	9002914	9033338	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_9003172_9007969_9008149_9011541_9011753_9016321_9016406_9018296_9018407_9020349_9020465_9032548
H1_mix_00085088	chr8	+	590	3	NIC	ENSG00000104626.15	novel	392	3	NA	NA	-45	159	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	7	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATGATAATAATAATAATAA	NA	False	NA	NA	False	AATAAA	-30	NA	9049772	9100260	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_9049851_9088459_9088570_9099858
H1_mix_00085089	chr8	+	1047	1	NIC	ENSG00000248538.9	novel	550	3	NA	NA	-997	-1301	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAACGTGGAAAAATAGGT	2222	False	NA	NA	False	NA	NA	NA	9154011	9155058	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_9154000_9155100
H1_mix_00085090	chr8	+	1588	1	FSM	ENSG00000173273.16	ENST00000522110.1	2900	1	-19	1331	1	-1331	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCACTGCCTGGATACCT	-8	True	NA	NA	False	AATAAA	-32	NA	9555912	9557500	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_9555900_9557500
H1_mix_00085091	chr8	+	8026	28	NIC	ENSG00000173273.16	novel	9622	27	NA	NA	-6	-1637	combination_of_known_junctions	FALSE	canonical	3	20	junction_27	41.3528760384686	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTAGTGTTTGAAAGGT	5	True	NA	14	True	AATAAA	-19	NA	9555925	9780709	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_9556613_9580158_9580384_9615581_9615678_9679950_9679988_9680724_9680801_9704662_9704758_9706186_9706254_9706810_9706998_9708370_9708493_9709954_9710047_9710141_9710221_9720373_9720546_9726640_9726721_9730889_9731036_9733278_9733445_9734864_9735085_9735376_9735487_9748023_9748213_9751608_9751847_9752543_9752627_9761515_9761637_9763146_9763245_9764715_9764791_9765691_9765798_9766238_9766426_9770105_9770263_9772368_9772424_9776649
H1_mix_00085092	chr8	+	2217	2	Genic_Genomic	ENSG00000253641.6	novel	545	5	NA	NA	-29645	1094	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCCCCCTCCCAGGCTG	NA	False	NA	NA	False	NA	NA	NA	10444919	10483482	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr8_+_10444947_10481292
H1_mix_00085093	chr8	+	2474	3	FSM	ENSG00000286985.2	ENST00000682432.1	2415	3	-23	-36	-23	36	multi-exon	FALSE	canonical	1	1	junction_1	4.5	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTCTGCAGGCCTACAT	NA	False	NA	NA	False	ACTAAA	-37	NA	11633074	11649369	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_11633328_11643331_11643520_11647336
H1_mix_00085094	chr8	+	898	3	FSM	ENSG00000136574.19	ENST00000532977.1	877	3	-21	0	-20	0	multi-exon	FALSE	canonical	2	2	junction_1	5.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTACGAGGCGGGCGGCCC	3	True	NA	NA	False	NA	NA	NA	11676938	11708360	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_11677064_11700510_11700779_11707855
H1_mix_00085095	chr8	+	2258	5	NIC	ENSG00000154328.16	novel	2323	6	NA	NA	-32	0	combination_of_known_splicesites	TRUE	canonical	3	29	junction_2	69.0072459963445	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGCTGTTTTTGTCTTTAT	NA	False	NA	12	True	AATAAA	-12	NA	11769606	11787340	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_11769792_11771445_11771591_11779597_11779951_11783202_11783400_11785962
H1_mix_00085096	chr8	+	1594	8	NIC	ENSG00000079459.13	novel	2462	9	NA	NA	48	0	combination_of_known_junctions	FALSE	canonical	1	62	junction_1	1400.30148357343	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGTCCATAGCTGAAG	44	False	NA	-22	True	NA	NA	NA	11795620	11838613	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_11796012_11802758_11802932_11808793_11808892_11809666_11809851_11826023_11826216_11830243_11830421_11831517_11831671_11838387
H1_mix_00085099	chr8	+	1987	8	FSM	ENSG00000079459.13	ENST00000622850.2	1987	8	0	0	0	0	multi-exon	FALSE	canonical	1	29	junction_1	1082.19363388651	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACAGTTCGCTTGAAAG	10	False	NA	20	True	AATAAA	-25	NA	11803088	11839304	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_11803226_11808793_11808892_11809666_11809851_11821749_11821879_11826023_11826216_11830243_11830421_11831517_11831671_11838387
H1_mix_00085100	chr8	+	842	4	FSM	ENSG00000255052.5	ENST00000665207.1	3212	4	33	2337	10	-2327	multi-exon	FALSE	canonical	2	3	junction_2	5.09901951359278	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGCACTTTCCCTGCTT	NA	False	NA	NA	False	AATGAA	-42	NA	12115843	12145700	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_12116326_12121986_12122161_12145422_12145547_12145638
H1_mix_00085101	chr8	+	460	3	Intergenic	novelGene_1434	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	4.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCATGCATCGCCATGTCT	4730	False	NA	NA	False	AAGAAA	-37	NA	12199808	12204935	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_12200008_12202481_12202621_12204813
H1_mix_00085102	chr8	+	3074	1	FSM	ENSG00000270074.1	ENST00000602981.1	1547	1	-1530	3	-1530	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATACTTTGTCTCTGTGTC	NA	False	NA	NA	False	NA	NA	NA	12411296	12414370	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_12411300_12414400
H1_mix_00085103	chr8	+	1095	5	Intergenic	novelGene_1437	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_4	23.7170824512628	247	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGCATCGCCATGTCTGG	110	False	NA	NA	False	AAGAAA	-39	NA	12437319	12447211	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_12437711_12438163_12438512_12440968_12441062_12444755_12444895_12447087
H1_mix_00085104	chr8	+	1078	5	Intergenic	novelGene_1438	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_4	24.1285619132181	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAGTACAAATGAAAAATG	110	False	NA	NA	False	AAAACA	-44	NA	12437319	12480935	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_12437711_12438163_12438512_12440968_12441062_12444755_12444895_12480828
H1_mix_00085105	chr8	+	2367	3	Antisense	novelGene_ENSG00000283674.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	55	junction_1	180	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCCAAACCTGGGGGAT	1033	False	NA	NA	False	NA	NA	NA	12522399	12567716	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr8_+_12522847_12530942_12531032_12565885
H1_mix_00085106	chr8	+	1127	2	Antisense	novelGene_ENSG00000242607.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2246	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCTGGGCGACAGACCC	6831	False	NA	NA	False	NA	NA	NA	12528197	12583634	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr8_+_12529261_12583570
H1_mix_00085107	chr8	+	1117	1	Genic_Genomic	ENSG00000255122.1	novel	NA	NA	NA	NA	-1080	-740	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACCAATCGACCGTTCC	NA	False	NA	NA	False	NA	NA	NA	12579206	12580323	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr8_+_12579200_12580300
H1_mix_00085109	chr8	+	202	1	FSM	ENSG00000214366.4	ENST00000528228.1	640	1	181	257	181	-257	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTCTGTGCCTTATTGG	NA	False	NA	NA	False	NA	NA	NA	14309213	14309415	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_14309200_14309400
H1_mix_00085111	chr8	+	2917	13	NIC	ENSG00000155975.10	novel	4519	12	NA	NA	0	-181	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	141.914195515772	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTCAAAGCGGTTATACA	1	True	NA	NA	False	GGGGCT	-8	NA	17246957	17302246	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_17247370_17265906_17265982_17268855_17268957_17274732_17274959_17276396_17276468_17280027_17280156_17280238_17280298_17280374_17280444_17284472_17284617_17286346_17286428_17294986_17296413_17298066_17298159_17302213
H1_mix_00085112	chr8	+	6295	38	NIC	ENSG00000078674.19	novel	8652	39	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	119	junction_23	83.8663499010587	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTTGACACTGCTTTTT	2	True	NA	16	True	AATAAA	-26	NA	17922989	18027758	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17947185_17947364_17950614_17950725_17952969_17953187_17955469_17955654_17956603_17956778_17957263_17957422_17957539_17957776_17960013_17960166_17960314_17960445_17962033_17962175_17963100_17963292_17964567_17964769_17965998_17966219_17966327_17966474_17966979_17967171_17969576_17969749_17972328_17972688_17985446_17985620_17985958_17986088_17989858_17989980_17991541_17991701_17993482_17993620_18006262_18006398_18009546_18009745_18010608_18010669_18011236_18011367_18011666_18011828_18013963_18014037_18014583_18014841_18025360_18025454_18025543_18025659_18027636
H1_mix_00085113	chr8	+	8473	38	NIC	ENSG00000078674.19	novel	6443	39	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	103.524810617747	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAATTGTATTTTCTTTT	40	False	NA	20	True	AATAAA	-20	NA	17923027	18029949	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_17923189_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17940041_17940159_17947185_17947364_17950614_17950725_17952969_17953187_17955469_17955654_17956603_17956778_17957263_17957422_17957539_17957776_17960013_17960166_17960314_17960445_17962033_17962175_17963100_17963292_17964567_17964769_17965998_17966219_17966327_17966474_17966979_17967171_17969576_17969749_17972328_17972688_17985446_17985620_17985958_17986088_17989858_17989980_17991541_17991677_17993482_17993620_18006262_18006398_18009546_18009745_18010608_18010669_18011236_18011367_18011666_18011828_18013963_18014037_18014583_18014841_18025360_18025454_18025543_18025659_18027636
H1_mix_00085114	chr8	+	6321	38	NNC	ENSG00000078674.19	novel	8652	39	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	105.829838474167	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTTGACACTGCTTTTT	1569	False	NA	16	True	AATAAA	-26	NA	17937193	18027758	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_17937380_17938739_17939010_17939690_17939862_17940041_17940159_17941646_17941836_17947185_17947364_17950614_17950725_17952969_17953187_17955469_17955654_17956603_17956778_17957263_17957422_17957539_17957776_17960013_17960166_17960314_17960445_17962033_17962175_17963100_17963292_17964567_17964769_17965998_17966219_17966327_17966474_17966979_17967171_17969576_17969749_17972328_17972688_17980590_17980756_17985446_17985620_17985958_17986088_17989858_17989980_17991541_17991701_17993482_17993620_18006262_18006398_18009546_18009745_18010608_18010669_18011236_18011367_18011666_18011828_18013963_18014037_18014583_18014841_18025360_18025454_18025543_18025659_18027636
H1_mix_00085117	chr8	+	2317	14	NIC	ENSG00000158856.19	novel	601	7	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	12.3341062714245	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTCTTTTCCTTATGA	0	True	NA	7	True	ATTAAA	-20	NA	22049151	22082525	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_22049225_22066837_22066894_22067084_22067160_22067526_22067683_22069015_22069061_22069418_22069519_22069880_22069938_22070181_22070335_22072325_22072451_22073729_22073836_22080179_22080245_22080411_22080461_22081112_22081194_22081349
H1_mix_00085120	chr8	+	2863	17	NNC	ENSG00000168487.20	novel	2320	17	NA	NA	12	-6	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_4	8.45484328654293	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAGTCTGCTTGTCCAT	27	False	NA	9	True	AGTAAA	-30	NA	22165411	22201476	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_22165554_22173601_22173716_22176142_22176314_22176532_22176651_22176923_22177140_22177851_22177958_22179704_22179830_22180367_22180484_22192048_22192152_22194057_22194175_22194444_22194591_22194723_22194920_22195461_22195588_22196679_22196841_22197239_22197421_22199021_22199388_22201117
H1_mix_00085123	chr8	+	1506	10	NIC	ENSG00000120913.24	novel	2236	10	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	129.916877509153	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAGTAGATGTCCCT	2	True	NA	7	True	TATAAA	-16	NA	22579144	22594290	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_22579210_22580602_22580698_22581378_22581531_22584820_22584891_22585016_22585163_22585320_22585400_22589297_22589375_22589595_22589742_22591550_22591669_22593732
H1_mix_00085126	chr8	+	459	3	NIC	ENSG00000246582.3	novel	1239	2	NA	NA	-354	-27	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	28.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTGTGGTATTTGGT	3791	False	NA	NA	False	AATAAA	-16	NA	23224866	23228180	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_23224892_23225804_23226124_23228065
H1_mix_00085128	chr8	+	1388	2	ISM	ENSG00000147454.14	ENST00000521637.1	503	3	1084	-613	1084	0	3prime_fragment	FALSE	canonical	3	201	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2	True	NA	NA	False	AAGAAA	-23	NA	23567859	23572203	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_23568379_23571334
H1_mix_00085129	chr8	+	3700	3	FSM	ENSG00000104722.14	ENST00000433454.3	2519	3	-1181	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	57.5	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGAGTCTTATGTCATT	0	True	NA	17	True	AATAAA	-24	NA	24913760	24919098	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_24915298_24915604_24915730_24917060
H1_mix_00085130	chr8	+	6054	14	ISM	ENSG00000147459.18	ENST00000276440.12	10246	52	195652	0	-11548	0	3prime_fragment	FALSE	canonical	2	3	junction_9	2.38089039085264	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTGTGTGTTTAGTTT	7733	False	NA	18	True	ATTAAA	-20	NA	25380340	25415711	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_25380395_25382673_25382779_25389090_25389233_25390205_25390288_25391895_25391981_25392795_25392883_25395542_25395720_25399910_25399995_25400928_25401067_25403557_25403725_25407982_25408155_25408801_25408941_25410098_25410203_25411193
H1_mix_00085132	chr8	+	1352	6	FSM	ENSG00000104765.16	ENST00000518611.5	1352	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	327.796644278126	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAAACTGTATAAATGATA	5608	False	NA	69	True	NA	NA	NA	26390361	26411048	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_26390518_26391242_26391427_26395229_26395303_26407999_26408104_26408226_26408377_26410363
H1_mix_00085134	chr8	+	1188	1	FSM	ENSG00000254013.1	ENST00000519737.1	1188	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1887	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTGGGAAGCAGCAAAG	NA	False	NA	NA	False	NA	NA	NA	30027712	30028900	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_30027700_30028900
H1_mix_00085135	chr8	+	2990	10	FSM	ENSG00000157110.16	ENST00000287771.9	2974	10	-16	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	561.088426384133	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCATTGCTTGACAAATTC	87	False	NA	25	True	AATAAA	-20	NA	30384510	30572256	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_30385159_30474778_30474857_30477798_30477838_30479314_30479378_30504285_30504437_30544493_30544625_30549499_30549586_30558886_30558957_30566256_30566361_30570636
H1_mix_00085137	chr8	+	1319	7	NIC	ENSG00000104691.16	novel	1451	8	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	16.4797855973108	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATCTATCTCATCATTT	1	True	NA	27	True	AATAAA	-38	NA	30744172	30767006	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_30744278_30753034_30753106_30754664_30754788_30756764_30756888_30760887_30760930_30763272_30763348_30766226
H1_mix_00085138	chr8	+	7282	34	NIC	ENSG00000165392.11	novel	7575	35	NA	NA	-10	-222	combination_of_known_splicesites	FALSE	canonical	3	73	junction_10	20.2166411737693	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGTTTTAATTTCTAAA	-15	True	NA	14	True	AATAAA	-19	NA	31033799	31175916	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_31033974_31058371_31058544_31059152_31059266_31064288_31064435_31064914_31065064_31067032_31067183_31068257_31068328_31076172_31076288_31080866_31081297_31083698_31083780_31087775_31087921_31088889_31088966_31090464_31090533_31090833_31090943_31091829_31091899_31096767_31096851_31100848_31100956_31111614_31111800_31116353_31116529_31120242_31120425_31124521_31124624_31124907_31125001_31132364_31132507_31141429_31141601_31141680_31141776_31142625_31142702_31143549_31143624_31147052_31147129_31147363_31147477_31150340_31150456_31154623_31154756_31157367_31157531_31167021_31167231_31172994
H1_mix_00085140	chr8	+	886	6	FSM	ENSG00000157168.20	ENST00000518206.5	886	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	35.4491184657672	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCAGATGTTTTTCTTCA	86	False	NA	8	True	AATAAA	-13	NA	32605647	32743224	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_32605684_32614513_32614565_32616834_32616886_32727948_32728079_32742007_32742076_32742674
H1_mix_00085141	chr8	+	1286	3	FSM	ENSG00000247134.8	ENST00000657565.1	1277	3	-9	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	33	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTACCCCAGCCAAACACT	-6	True	NA	NA	False	NA	NA	NA	32927967	33045410	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_32928094_32996200_32996317_33044366
H1_mix_00085142	chr8	+	17898	16	NIC	ENSG00000156687.11	novel	9149	17	NA	NA	0	8772	combination_of_known_junctions	FALSE	canonical	3	21	junction_6	22.5756998168877	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTCGCTTGGTTTATGC	-2	True	NA	NA	False	AATAAA	-20	NA	35235474	35805322	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_35235888_35549291_35549511_35568097_35568242_35595553_35595658_35683546_35683728_35684581_35684750_35686544_35686710_35722209_35722396_35726151_35726530_35731011_35731097_35748526_35748696_35750581_35750810_35759319_35759470_35766901_35767067_35774298_35774478_35790358
H1_mix_00085143	chr8	+	2098	6	FSM	ENSG00000147475.17	ENST00000523887.5	2347	6	-22	271	2	-269	multi-exon	FALSE	canonical	3	12	junction_1	4.66476151587624	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCACTTCTTACTCTGCC	6	True	NA	NA	False	TTTAAA	-19	NA	37736602	37746279	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_37736679_37737907_37738030_37740364_37740447_37741771_37741819_37744354_37744417_37744570
H1_mix_00085144	chr8	+	774	5	FSM	ENSG00000085788.14	ENST00000526144.1	774	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	9.36416040016402	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGATCTAGGCTGCTATT	5303	False	NA	NA	False	AATATA	-18	NA	38252165	38260254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_38252288_38252721_38252825_38252956_38253128_38253555_38253719_38260039
H1_mix_00085146	chr8	+	372	1	FSM	ENSG00000253332.1	ENST00000518393.1	307	1	6	-71	6	71	mono-exon	FALSE	NA	NA	NA	NA	NA	671	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGGAATCTAGAAAGAGAA	NA	False	NA	NA	False	ATTAAA	-26	NA	39860224	39860596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_39860200_39860600
H1_mix_00085147	chr8	+	582	6	FSM	ENSG00000147533.18	ENST00000523420.5	582	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	279.19842406432	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCAGAGCCACGGTGCCA	38	False	NA	NA	False	NA	NA	NA	41490611	41509673	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_41490690_41490869_41490966_41497508_41497662_41505910_41506013_41507058_41507122_41509583
H1_mix_00085148	chr8	+	601	1	Intergenic	novelGene_1459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTATGTCCTGGAGTTTT	1455	False	NA	8	True	AATAAA	-22	NA	41530710	41531311	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_41530700_41531300
H1_mix_00085151	chr8	+	2160	6	FSM	ENSG00000104365.16	ENST00000519938.5	2403	6	243	0	243	0	multi-exon	FALSE	canonical	3	91	junction_2	5.9194594347795	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGGTGGTTGTCCTCTT	NA	False	NA	16	True	NA	NA	NA	42320948	42331609	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_42321946_42322053_42322154_42322346_42322495_42325969_42326098_42329123_42329215_42330913
H1_mix_00085152	chr8	+	256	2	FSM	ENSG00000104365.16	ENST00000522133.1	576	2	0	320	0	-320	multi-exon	FALSE	canonical	3	105	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGGGGATGGAGGCGTTTG	NA	False	NA	NA	False	NA	NA	NA	42322417	42326148	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_42322495_42325969
H1_mix_00085155	chr8	+	240	1	FSM	ENSG00000254131.1	ENST00000517332.1	420	1	278	-98	278	98	mono-exon	FALSE	NA	NA	NA	NA	NA	252	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCACTGTGCCTGTAAAG	NA	False	NA	NA	False	NA	NA	NA	42484877	42485117	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_42484900_42485100
H1_mix_00085156	chr8	+	2644	4	FSM	ENSG00000176209.12	ENST00000438528.7	2958	4	0	314	0	-314	multi-exon	FALSE	canonical	3	26	junction_1	262.097098207685	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCTGCCCTGGTGCACA	2	True	NA	NA	False	NA	NA	NA	42541154	42554879	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_42541200_42546468_42546607_42548655_42548781_42552543
H1_mix_00085158	chr8	+	578	3	NNC	ENSG00000165102.15	novel	491	5	NA	NA	-73	-20432	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	53	158	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGAAATCATGTCCTTTG	12	False	NA	NA	False	AATAAA	-28	NA	43140390	43147576	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_43140615_43146947_43147064_43147338
H1_mix_00085159	chr8	+	4124	17	NIC	ENSG00000165102.15	novel	5227	18	NA	NA	4	-1028	combination_of_known_splicesites	TRUE	canonical	3	14	junction_8	27.9636343086874	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGTGGATTTTTAAAATA	38	True	NA	17	True	AATAAA	-17	NA	43140507	43201827	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_43140615_43146947_43147064_43158574_43158712_43158922_43159045_43161437_43161508_43169172_43169243_43170584_43170695_43172309_43172387_43178073_43178235_43182144_43182261_43191473_43191596_43192303_43192431_43193756_43193844_43196947_43197026_43197671_43197743_43197839_43197953_43199387
H1_mix_00085160	chr8	+	752	1	FSM	ENSG00000269924.1	ENST00000602578.1	752	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACAGTTTCATCACTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	47527396	47528148	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_47527400_47528100
H1_mix_00085161	chr8	+	4031	2	FSM	ENSG00000228801.7	ENST00000656129.1	4014	2	-17	0	-17	0	multi-exon	FALSE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTTTCCTTGCTACAAC	685	False	NA	-9	True	NA	NA	NA	51899250	51949870	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_51899847_51946435
H1_mix_00085162	chr8	+	1145	6	NNC	ENSG00000137547.9	novel	1729	5	NA	NA	0	19291	intron_retention	FALSE	non_canonical	0	0	junction_5	341.577165513153	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGATGCTGGCAAGGTT	-4	True	NA	NA	False	AAAAAG	-8	NA	54135240	54167805	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_54135392_54136510_54136666_54137267_54137434_54142662_54142787_54147381_54147897_54167771
H1_mix_00085163	chr8	+	4985	14	NNC	ENSG00000137574.11	novel	4477	13	NA	NA	0	1953	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	57.0566001554752	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATTTGCTTTGTTTTGTT	-7	True	NA	12	True	ATTAAA	-26	NA	55773445	55828398	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_55773720_55782747_55782813_55785718_55785892_55786237_55787061_55790181_55790300_55792697_55792785_55795977_55796153_55798913_55799221_55802456_55802607_55804892_55805037_55810880_55811098_55813039_55813119_55824580_55826508_55827952
H1_mix_00085164	chr8	+	3234	12	NIC	ENSG00000137574.11	novel	4477	13	NA	NA	-12	-2	combination_of_known_junctions	FALSE	canonical	3	8	junction_10	57.5963440070219	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGATATGTGTTGCTTAA	5	True	NA	16	True	ATTAAA	-17	NA	55773457	55825446	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_55773720_55782747_55782813_55785718_55785892_55786237_55787061_55790181_55790300_55792697_55792785_55795977_55796153_55798913_55799221_55802456_55802607_55804892_55805037_55813054_55813119_55824580
H1_mix_00085166	chr8	+	555	6	FSM	ENSG00000170791.18	ENST00000521982.5	552	6	-3	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	209.496157482661	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATTAAAAGTGTTTATATA	-3	True	NA	-8	True	NA	NA	NA	56211785	56217441	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_56211838_56212761_56212910_56214597_56214668_56216432_56216532_56216679_56216755_56217330
H1_mix_00085167	chr8	+	4799	7	NIC	ENSG00000215114.10	novel	4971	8	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_5	84.0171940074702	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAAAGGTTTTTCAAATT	34	False	NA	13	True	AATAAA	-22	NA	58411394	58451501	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_58411470_58416849_58416954_58430518_58430670_58433159_58433244_58434394_58434505_58445906_58446069_58447388
H1_mix_00085169	chr8	+	1317	3	NIC	ENSG00000167912.7	novel	1227	2	NA	NA	39	-115	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	3.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAGTTTTGTGTTTCATA	40	False	NA	NA	False	AATAAA	-22	NA	59119260	59121141	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_59119286_59119585_59120072_59120335
H1_mix_00085170	chr8	+	866	9	FSM	ENSG00000104388.15	ENST00000466595.5	866	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	426.456328362002	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGAGATTGTATTCATAT	41	False	NA	19	True	AATAAA	-28	NA	60517223	60620948	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_60517254_60558851_60558924_60572045_60572114_60576233_60576298_60584207_60584291_60584722_60584816_60591857_60591970_60618579_60618649_60620673
H1_mix_00085171	chr8	+	4777	12	FSM	ENSG00000171316.12	ENST00000525508.1	4777	12	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_6	13.1293627145135	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTGACTATTATTTGGT	128	False	NA	NA	False	ATTAAA	-24	NA	60741432	60825415	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_60743098_60780999_60781431_60794985_60795128_60800387_60800526_60801527_60801594_60808216_60808273_60816386_60816502_60820006_60820091_60821789_60821928_60822023_60822146_60822502_60822747_60823839
H1_mix_00085172	chr8	+	2042	6	FSM	ENSG00000185942.13	ENST00000675749.1	2093	6	51	0	-37	0	multi-exon	FALSE	canonical	0	0	junction_1	2.4	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCAGCTTCCTGAGTCTTT	53	False	NA	NA	False	AATAAA	-14	NA	62248904	62946814	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_62249128_62579538_62579677_62589713_62589795_62746931_62747130_62918452_62918514_62945473
H1_mix_00085173	chr8	+	5166	1	FSM	ENSG00000261542.1	ENST00000569835.1	2054	1	-3194	82	-3194	-82	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGCTTACATAATTAAGTGT	2854	False	NA	36	True	AATAAA	-39	NA	63212786	63217952	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_63212800_63218000
H1_mix_00085174	chr8	+	501	1	FSM	ENSG00000254377.7	ENST00000685732.1	982	1	0	481	0	-481	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTCCCTTTTTCTTCC	-1	True	NA	NA	False	NA	NA	NA	64379231	64379732	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_64379200_64379700
H1_mix_00085176	chr8	+	2250	14	FSM	ENSG00000147576.17	ENST00000424777.6	2229	14	-21	0	-15	0	multi-exon	FALSE	canonical	2	4	junction_2	11.8061261802767	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTAAGTATTCATTATTGG	-19	True	NA	13	True	AATAAA	-14	NA	66432476	66468809	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_66432576_66440161_66440200_66442797_66442845_66444366_66444421_66444593_66444749_66445217_66445415_66447263_66447342_66448864_66448971_66451952_66452106_66453709_66454158_66456816_66456896_66457069_66457167_66460307_66460466_66468268
H1_mix_00085179	chr8	+	1440	11	FSM	ENSG00000104218.16	ENST00000678204.1	1432	11	-8	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	16.3220709470337	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTACTACCACCTTTGGC	-23	True	NA	NA	False	NA	NA	NA	67064361	67118269	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_67064497_67074242_67074352_67086006_67086111_67093542_67093642_67095292_67095733_67103036_67103136_67105904_67105976_67111971_67112066_67113804_67113863_67115913_67116123_67118247
H1_mix_00085182	chr8	+	2790	17	FSM	ENSG00000104218.16	ENST00000676804.1	2790	17	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	22.2597415472417	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTGTTACTAATTACAT	NA	False	NA	-61	True	AATGAA	-7	NA	67131950	67196194	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_67132081_67137455_67137604_67149782_67149936_67154023_67154137_67158446_67158597_67158990_67159138_67161810_67161916_67163731_67163799_67164390_67164509_67172415_67172556_67172768_67172974_67175295_67175437_67177679_67177727_67179862_67179927_67190649_67190760_67193463_67193603_67195381
H1_mix_00085183	chr8	+	2958	19	NNC	ENSG00000046889.19	novel	3612	24	NA	NA	65	-20615	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_18	15.8823801742686	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTTATTCTAATGTATGA	0	True	NA	5	True	AATAAA	-16	NA	67952110	68085392	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_67952536_68017845_68017918_68019548_68019672_68022035_68022141_68027221_68027324_68030496_68030659_68038158_68038293_68044486_68044591_68053096_68053247_68055829_68055975_68060678_68060780_68069032_68069137_68069834_68069885_68072494_68072571_68077396_68077470_68080442_68080586_68080745_68080839_68083239_68083389_68084745
H1_mix_00085184	chr8	+	2447	14	FSM	ENSG00000165084.16	ENST00000518698.6	2452	14	0	5	0	-4	multi-exon	TRUE	canonical	0	0	junction_7	6.23409218133994	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACTGTCTGTTTTATTTT	0	True	NA	NA	False	AGTAAA	-13	NA	68330954	68819018	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_68331340_68439498_68439647_68446328_68446461_68468691_68468821_68488022_68488052_68521798_68521972_68532982_68533150_68640375_68640512_68708993_68709080_68721360_68721438_68776398_68776450_68787442_68787537_68815885_68815946_68818238
H1_mix_00085185	chr8	+	387	4	FSM	ENSG00000165084.16	ENST00000518515.1	464	4	0	77	0	-77	multi-exon	FALSE	canonical	0	0	junction_1	2.82842712474619	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTAGACACTATTGTTT	NA	False	NA	NA	False	NA	NA	NA	68533019	68787536	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_68533150_68708993_68709080_68721360_68721438_68787442
H1_mix_00085186	chr8	+	3856	9	ISM	ENSG00000137573.14	ENST00000458141.6	5551	22	126	56720	-67	6603	intron_retention	FALSE	canonical	3	22	junction_5	6.72216482987438	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTTATCATGGGTGTAGA	15	False	NA	8	True	AATAAA	-22	NA	69466749	69604195	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_69466951_69501873_69501969_69563538_69563612_69563915_69564148_69575969_69576210_69586356_69586509_69588971_69589142_69600602_69600754_69601653
H1_mix_00085189	chr8	+	7536	1	Genic_Genomic	ENSG00000253636.1	novel	NA	NA	NA	NA	4332	984	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCTCTCTCTGGAAGGT	394	False	NA	NA	False	NA	NA	NA	73056509	73064045	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr8_+_73056500_73064000
H1_mix_00085190	chr8	+	1367	2	FSM	ENSG00000121039.10	ENST00000521013.1	1367	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACCATTATTTTTTAATG	NA	False	NA	NA	False	NA	NA	NA	73321839	73323308	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_73322811_73322912
H1_mix_00085191	chr8	+	215	1	FSM	ENSG00000253273.2	ENST00000519383.2	805	1	545	45	545	-45	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGCTCAAACTACAGCTA	NA	False	NA	NA	False	AATACA	-32	NA	73831687	73831902	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_73831700_73831900
H1_mix_00085192	chr8	+	5100	4	FSM	ENSG00000104381.14	ENST00000674754.1	5105	4	5	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	76.6130247122221	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCCAAAATTTGTATAAAT	-27	True	NA	NA	False	NA	NA	NA	74350399	74366582	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_74350579_74351273_74351322_74360136_74360311_74361883
H1_mix_00085193	chr8	+	4452	5	FSM	ENSG00000104381.14	ENST00000674926.1	4456	5	4	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	79.3867117343954	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTAAAACAAAGTACTCACT	-27	True	NA	2	True	AATAAA	-25	NA	74350399	74366865	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_74350579_74351273_74351322_74360136_74360311_74361883_74363054_74363984
H1_mix_00085195	chr8	+	4173	11	NIC	ENSG00000164749.13	novel	410	5	NA	NA	-15	-1	combination_of_known_junctions	FALSE	canonical	2	5	junction_4	4.3	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACTGAAACCAGGTGCTT	1	False	NA	NA	False	AATAAA	-17	NA	75407898	75566833	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_75407965_75490088_75490209_75543810_75543980_75547586_75547682_75551387_75551495_75553041_75553198_75555981_75556070_75558517_75558671_75558800_75559038_75560343_75560467_75563974
H1_mix_00085197	chr8	+	3081	16	NIC	ENSG00000133739.16	novel	3726	19	NA	NA	53	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	22.9662554389889	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTCTGTTCCTGAAGAG	26	False	NA	10	True	ATTAAA	-24	NA	85107290	85146080	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_85107400_85110114_85110181_85112931_85113100_85123412_85123607_85124791_85124940_85126688_85126838_85129174_85129380_85129918_85130059_85131759_85131962_85134846_85135033_85135788_85135964_85137463_85137628_85138034_85138244_85138337_85138476_85141381_85141518_85145388
H1_mix_00085198	chr8	+	865	4	FSM	ENSG00000185015.8	ENST00000517831.5	865	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.471404520791032	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAGATTAAAACCAAAGAAG	18	True	NA	NA	False	NA	NA	NA	85220586	85250797	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_85221126_85230084_85230201_85237718_85237871_85250739
H1_mix_00085199	chr8	+	1622	6	ISM	ENSG00000164879.7	ENST00000285381.3	1721	7	867	0	867	0	3prime_fragment	TRUE	canonical	3	7	junction_1	2.87054001888146	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGAGTGTTGTGTTTTTT	868	False	NA	6	True	AATAAA	-16	NA	85439725	85449040	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_85439910_85442072_85442192_85444033_85444127_85445155_85445219_85446141_85446298_85448033
H1_mix_00085200	chr8	+	2363	8	FSM	ENSG00000147614.4	ENST00000285393.4	2370	8	0	7	0	-7	multi-exon	FALSE	canonical	0	0	junction_6	2.38190457150472	168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTCTTTCTTGTGGTTT	-1	True	NA	-6	True	AATAAA	-36	NA	86098909	86154218	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_86099109_86113708_86113881_86139456_86139636_86141449_86141530_86142876_86142955_86150111_86150289_86151465_86151541_86152815
H1_mix_00085203	chr8	+	303	4	FSM	ENSG00000085719.13	ENST00000621526.4	279	4	-24	0	-16	0	multi-exon	FALSE	canonical	2	5	junction_2	127.515576390581	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGCTGAATGTTTCCTGTG	-31	True	NA	NA	False	NA	NA	NA	86514418	86528571	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_86514542_86515461_86515500_86524708_86524815_86528535
H1_mix_00085204	chr8	+	654	7	FSM	ENSG00000104325.7	ENST00000517314.5	654	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	148.443872670223	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATATGGAATGCGATTCA	79	False	NA	NA	False	NA	NA	NA	90001445	90042748	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_90001562_90017202_90017327_90018908_90018967_90019085_90019173_90020908_90021057_90036840_90036941_90042727
H1_mix_00085206	chr8	+	1080	6	ISM	ENSG00000123119.12	ENST00000417640.7	5049	13	136337	3352	-12080	223	3prime_fragment	FALSE	canonical	3	33	junction_4	5.74108003776293	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAGTATATAGGCATCAAA	-10	True	NA	NA	False	NA	NA	NA	90928111	90956041	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_90928300_90934303_90934358_90940785_90940899_90949806_90949885_90951112_90951205_90955486
H1_mix_00085208	chr8	+	4087	27	FSM	ENSG00000164953.17	ENST00000683953.1	4084	27	-3	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	19.5850821746293	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGATGAAAATATATACTAAA	4	True	NA	-15	True	TATAAA	-19	NA	93754911	93817637	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_93755138_93758482_93758577_93763841_93763942_93765405_93765476_93765571_93765647_93772588_93772652_93780592_93780748_93780873_93780983_93781657_93781745_93782394_93782461_93785221_93785379_93786222_93786347_93787843_93787950_93791262_93791320_93793197_93793297_93795408_93795508_93795900_93795988_93797133_93797234_93797330_93797471_93799617_93799759_93803603_93803685_93804761_93804879_93808839_93808957_93809056_93809162_93809784_93809888_93815304_93815448_93816371
H1_mix_00085211	chr8	+	1813	1	FSM	ENSG00000104413.18	ENST00000523347.1	1813	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGATTTTTTTTTTG	893	False	NA	20	True	AATAAA	-21	NA	94705653	94707466	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_94705700_94707500
H1_mix_00085212	chr8	+	6043	18	NIC	ENSG00000156162.16	novel	6197	19	NA	NA	29	0	intron_retention	FALSE	canonical	3	42	junction_2	20.8946939507167	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCTGAGTTTAGCATAAA	29	True	NA	10	True	AATAAA	-19	NA	94719928	94793836	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_94720015_94726330_94726442_94738368_94738460_94739412_94739535_94739644_94739791_94756035_94756160_94761699_94761835_94765182_94765315_94765710_94765810_94766611_94766686_94768394_94768554_94770451_94770572_94777665_94777787_94780358_94780416_94781083_94781167_94783669_94783803_94787893_94788053_94789745
H1_mix_00085213	chr8	+	1130	6	FSM	ENSG00000156162.16	ENST00000519176.5	1124	6	-6	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	34.6063577973759	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCGTGTTCTTAATGGT	6447	False	NA	111	True	ATTAAA	-21	NA	94726395	94745084	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_94726442_94734629_94734755_94738368_94738460_94739412_94739535_94739644_94739791_94744484
H1_mix_00085219	chr8	+	1118	10	NIC	ENSG00000156170.13	novel	1373	11	NA	NA	0	6	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	81.5431416528532	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTCTAGTCTATTAGTT	-26	True	NA	19	True	ATTAAA	-21	NA	95025032	95057958	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_95025206_95031994_95032099_95034007_95034123_95035453_95035577_95041569_95041627_95045544_95045648_95046993_95047128_95048456_95048559_95052173_95052231_95057808
H1_mix_00085220	chr8	+	820	8	NIC	ENSG00000156170.13	novel	1196	10	NA	NA	79	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_7	89.268226858892	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCATTGATGTTAATTCT	88	False	NA	7	True	ATTAAA	-9	NA	95025146	95057946	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_95025206_95031994_95032099_95035453_95035577_95041569_95041627_95045544_95045648_95046993_95047128_95048456_95048559_95057808
H1_mix_00085226	chr8	+	14082	62	FSM	ENSG00000132549.20	ENST00000358544.7	14086	62	4	0	2	0	multi-exon	FALSE	canonical	1	2	junction_27	7.16627864260421	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTGAATAAGTGTCATTT	-7	True	NA	NA	False	AATAAA	-17	NA	99013277	99877580	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_99013348_99013759_99013936_99038422_99038567_99096311_99096433_99102952_99103121_99111097_99111280_99115699_99115875_99121176_99121446_99134631_99134728_99135014_99135138_99135595_99135734_99136664_99136753_99142973_99143166_99147840_99148011_99156548_99156744_99170038_99170164_99192875_99193058_99274197_99274333_99275080_99275255_99384207_99384318_99391556_99391705_99431536_99431665_99442400_99442636_99467413_99467635_99481598_99481803_99501686_99501859_99502835_99502951_99507769_99507912_99511103_99511513_99520898_99521011_99556449_99556654_99575657_99575785_99577489_99577634_99641810_99642499_99661353_99661492_99699524_99699933_99717170_99717374_99720344_99720553_99720862_99721048_99766773_99766971_99776774_99776957_99778681_99779032_99784314_99784477_99809374_99809531_99817539_99817804_99818450_99818535_99818712_99818889_99819411_99819583_99819920_99820123_99821293_99821483_99823831_99823979_99832368_99832653_99835196_99835325_99835538_99835739_99848775_99848895_99853450_99854257_99859303_99859481_99861775_99861947_99868288_99868466_99870784_99870888_99871447_99871698_99875417
H1_mix_00085234	chr8	+	7386	27	NIC	ENSG00000176406.23	novel	7564	31	NA	NA	266	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_21	7.18036853564581	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCGTCTGCAGTGCTTTC	145	False	NA	5	True	AATAAA	-13	NA	103501016	104254425	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_103501063_103697085_103697297_103766226_103766538_103885297_103886224_103910320_103910530_103912052_103912173_103915494_103915595_103916413_103916538_103918440_103918488_103921671_103921785_103931262_103931394_103936550_103936723_103942772_103942927_103961064_103961134_103975349_103975507_103989304_103989422_104013441_104013622_104014505_104014616_104068511_104068613_104093470_104093644_104094477_104094730_104148606_104148849_104244915_104245058_104248700_104248814_104249486_104249589_104251023_104251164_104251601
H1_mix_00085247	chr8	+	3372	21	NNC	ENSG00000156787.17	novel	3478	22	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_15	66.8255003722381	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTGTGTTAAGCTTTC	-12	True	NA	10	True	AATAAA	-18	NA	123072706	123152149	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_+_123072847_123077110_123077258_123082701_123082818_123084161_123084341_123093590_123093743_123097281_123097442_123100806_123101008_123105287_123105465_123109316_123109397_123109473_123109621_123120054_123120189_123126055_123126190_123126507_123126688_123128280_123128514_123129069_123129219_123130202_123130334_123140760_123140902_123142261_123142457_123144716_123144856_123150035_123150129_123151805
H1_mix_00085249	chr8	+	3272	21	NIC	ENSG00000156787.17	novel	3478	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	62.7020733309514	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTAAGCTTTCAGGT	47	True	NA	14	True	AATAAA	-22	NA	123072765	123152153	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_123072847_123077110_123077258_123082701_123082818_123084161_123084341_123093590_123093743_123097281_123097442_123100806_123101008_123105287_123105465_123109316_123109397_123109527_123109621_123120054_123120189_123126055_123126190_123126507_123126688_123128280_123128514_123129065_123129219_123130197_123130334_123140760_123140902_123142261_123142457_123144716_123144856_123150035_123150129_123151805
H1_mix_00085250	chr8	+	3953	22	NIC	ENSG00000156787.17	novel	3478	22	NA	NA	8	-40	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	49.5153838986469	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTGAACTTTTTACAATA	55	True	NA	-29	True	NA	NA	NA	123072773	123152110	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_123073432_123077110_123077258_123082701_123082818_123084161_123084341_123093590_123093743_123097281_123097442_123100806_123101008_123105287_123105465_123109316_123109397_123109473_123109621_123120054_123120189_123126055_123126190_123126507_123126688_123128280_123128514_123129065_123129219_123130197_123130334_123134113_123134207_123140760_123140902_123142261_123142457_123144716_123144856_123150035_123150129_123151805
H1_mix_00085251	chr8	+	930	7	FSM	ENSG00000156795.8	ENST00000517609.5	909	7	-21	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	56.3579827728266	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGTACTTGCTAAGATATT	-31	True	NA	46	True	CATAAA	-40	NA	123416770	123441623	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_123416857_123427923_123428024_123429982_123430034_123435441_123435543_123436452_123436602_123437209_123437335_123441305
H1_mix_00085255	chr8	+	1039	4	FSM	ENSG00000249859.13	ENST00000664139.1	1036	4	-5	2	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6.64997911442	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATATTTCTATCTTATAA	-13	True	NA	NA	False	AATAAA	-27	NA	127794525	127932706	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_127794735_127795893_127796072_127890588_127890999_127932464
H1_mix_00085256	chr8	+	1489	7	NIC	ENSG00000249859.13	novel	1585	8	NA	NA	1	-6	combination_of_known_junctions	FALSE	canonical	3	12	junction_5	32.9730529709067	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTCTACTACAATGCCG	17	True	NA	23	True	ATTAAA	-3	NA	127794555	128101241	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_127794735_127890588_127890999_127939507_127939677_127989161_127989292_128070159_128070362_128096517_128096655_128100979
H1_mix_00085260	chr8	+	2246	14	NIC	ENSG00000129292.21	novel	6233	21	NA	NA	-7	-5320	combination_of_known_junctions	FALSE	canonical	3	75	junction_1	25.4876696026755	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTTAGCTAAACTAATAT	-19	True	NA	NA	False	AATAAA	-33	NA	132775364	132832496	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_132775646_132777791_132777912_132794409_132794582_132794732_132794818_132798771_132798861_132803818_132804033_132804614_132804741_132811045_132811129_132814636_132814890_132816887_132817077_132817338_132817546_132824003_132824061_132825263_132825372_132832234
H1_mix_00085261	chr8	+	6144	20	NIC	ENSG00000129292.21	novel	6233	21	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	36	junction_6	33.509580223557	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCACTGTCTCTGTTAAT	17	True	NA	6	True	AATAAA	-16	NA	132775400	132848806	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_132775646_132777791_132777912_132794409_132794582_132794732_132794818_132798771_132798861_132803818_132804033_132804611_132804741_132811045_132811129_132814636_132814890_132816887_132817077_132817338_132817546_132824003_132824061_132825263_132825372_132832234_132832400_132836539_132836722_132837711_132837812_132839386_132839583_132842514_132842876_132844155_132844319_132845780
H1_mix_00085267	chr8	+	1979	6	NIC	ENSG00000184489.13	novel	1899	5	NA	NA	-5	0	intron_retention	FALSE	canonical	2	5	junction_1	75.2951525664169	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGTGTGTGGAGTGGGC	4	True	NA	16	True	AATAAA	-13	NA	141417903	141431520	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_141418032_141421387_141422346_141425047_141425141_141426938_141427070_141427749_141427825_141430926
H1_mix_00085268	chr8	+	1904	5	FSM	ENSG00000184489.13	ENST00000681443.1	1899	5	-5	0	-5	0	multi-exon	FALSE	canonical	2	5	junction_1	95.4175036353394	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGTGTGTGGAGTGGGC	4	True	NA	16	True	AATAAA	-13	NA	141417903	141431520	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_141418032_141421387_141422346_141425047_141425141_141426938_141427070_141430926
H1_mix_00085275	chr8	+	3157	11	NIC	ENSG00000158106.14	novel	3695	15	NA	NA	0	-254	intron_retention	TRUE	canonical	3	52	junction_5	19.9799899899875	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCCCGGCCCCTCCTCAA	-1	True	NA	NA	False	NA	NA	NA	143368875	143382525	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_+_143369048_143375552_143375669_143376524_143376654_143377379_143377456_143378268_143378821_143378911_143379079_143379314_143380784_143381267_143381345_143381571_143381719_143381806_143381969_143382435
H1_mix_00085283	chr8	+	1090	3	FSM	ENSG00000197858.11	ENST00000534072.1	1090	3	0	0	0	0	multi-exon	FALSE	canonical	3	652	junction_1	15	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAATAAATGAGTGTCTG	701	False	NA	-5	True	NA	NA	NA	144084851	144086184	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144085139_144085288_144085480_144085572
H1_mix_00085286	chr8	+	1684	5	FSM	ENSG00000185803.12	ENST00000675597.1	1673	5	-11	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	217.212453602458	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGGCATTAATTCTTT	-5	True	NA	28	True	AATAAA	-15	NA	144358594	144361272	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144359066_144359183_144359424_144360114_144360494_144360589_144360714_144360802
H1_mix_00085287	chr8	+	1795	6	FSM	ENSG00000185803.12	ENST00000676358.1	1780	6	-15	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	206.058826552031	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCATTAATTCTTTGAGC	13	True	NA	32	True	AATAAA	-19	NA	144358612	144361276	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144359066_144359183_144359424_144359622_144359748_144360114_144360494_144360589_144360714_144360802
H1_mix_00085291	chr8	+	990	2	ISM	ENSG00000160959.8	ENST00000528528.1	1408	3	537	36	-153	-36	intron_retention	FALSE	canonical	3	85	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCGCCCCTTTAGACCCC	573	False	NA	NA	False	NA	NA	NA	144523118	144524410	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_+_144523334_144523635
H1_mix_00085293	chr8	+	1133	4	FSM	ENSG00000147789.16	ENST00000528130.1	1134	4	1	0	1	0	multi-exon	FALSE	canonical	0	0	junction_3	27.6445694888204	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAATGGTGTGAGCCCAG	1195	False	NA	NA	False	NA	NA	NA	144829042	144838848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144829091_144829477_144829605_144837390_144837508_144838007
H1_mix_00085294	chr8	+	4558	2	FSM	ENSG00000147789.16	ENST00000528017.1	5641	2	1083	0	1083	0	multi-exon	FALSE	canonical	3	103	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTATTTTATATGGAATCG	6968	False	NA	21	True	AATAAA	-17	NA	144834815	144843220	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_144837508_144841354
H1_mix_00085295	chr8	-	217	1	FSM	ENSG00000254193.1	ENST00000520478.1	145	1	6	-78	6	78	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTGCCTAGCCGCCCA	NA	False	NA	NA	False	NA	NA	NA	150722	150505	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_150500_150700
H1_mix_00085296	chr8	-	677	1	FSM	ENSG00000279852.1	ENST00000623988.1	2396	1	1630	89	1630	-89	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTACTTTTACTTCTCTG	NA	False	NA	NA	False	NA	NA	NA	486882	486205	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_486200_486900
H1_mix_00085297	chr8	-	1917	2	Intergenic	novelGene_1415	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCATACATTTTTTTAAAAC	NA	False	NA	4	True	AATAAA	-20	NA	636017	632462	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_-_634030_635667
H1_mix_00085298	chr8	-	5252	9	FSM	ENSG00000091879.14	ENST00000629816.3	5268	9	0	16	0	3	multi-exon	FALSE	canonical	2	6	junction_3	3.1224989991992	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACGATAACAAGAAATCTG	1	True	NA	NA	False	AATAAA	-21	NA	6563245	6499647	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_6503262_6508931_6509063_6513677_6513845_6514676_6514779_6519863_6519992_6521177_6521411_6527554_6527677_6532331_6532488_6562646
H1_mix_00085299	chr8	-	3037	5	FSM	ENSG00000249898.9	ENST00000661193.1	3037	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.58602010819715	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATTCCACCTCAAAAAAAA	-1	True	NA	NA	False	NA	NA	NA	6708209	6617309	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_6619203_6620134_6620225_6627150_6627311_6634594_6635420_6708140
H1_mix_00085300	chr8	-	231	1	FSM	ENSG00000254683.1	ENST00000528310.1	210	1	9	-30	9	30	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTGTTGTTATTATTG	NA	False	NA	NA	False	NA	NA	NA	7143832	7143601	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_7143600_7143800
H1_mix_00085301	chr8	-	604	3	Genic_Genomic	ENSG00000284614.1	novel	218	1	NA	NA	-501	6137	multi-exon	FALSE	canonical	1	2	junction_2	11	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTCAAAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	7222431	7215575	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr8_-_7215851_7221712_7221954_7222343
H1_mix_00085302	chr8	-	1683	1	FSM	ENSG00000284614.1	ENST00000641497.1	218	1	-68	-1397	-68	1397	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCTTGGGAACGCGATTC	7	True	NA	NA	False	NA	NA	NA	7221998	7220315	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_7220300_7222000
H1_mix_00085303	chr8	-	467	2	Intergenic	novelGene_1421	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCTTGGGAACGCGATTC	NA	False	NA	NA	False	NA	NA	NA	7227780	7220315	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_-_7220505_7227502
H1_mix_00085304	chr8	-	4227	6	FSM	ENSG00000215374.6	ENST00000664195.1	4238	6	29	-18	4	17	multi-exon	TRUE	canonical	2	2	junction_1	2.31516738055805	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCCTCTGTGTCTTATT	NA	False	NA	NA	False	NA	NA	NA	7355330	7298726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_7302172_7324296_7324365_7324821_7324890_7325136_7325199_7349082_7349147_7354810
H1_mix_00085305	chr8	-	433	2	Intergenic	novelGene_1424	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTTTTAACAATTATTT	5317	False	NA	NA	False	AATAAA	-27	NA	7675288	7674133	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_-_7674447_7675168
H1_mix_00085306	chr8	-	765	2	Intergenic	novelGene_1425	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTCACAAGAGACAAGGT	377	False	NA	NA	False	ACTAAA	-45	NA	7686375	7678613	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_-_7679101_7686097
H1_mix_00085308	chr8	-	785	1	Intergenic	novelGene_1428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCTCCCAGACAGCATCC	NA	False	NA	NA	False	NA	NA	NA	8060686	8059901	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_-_8059900_8060700
H1_mix_00085310	chr8	-	3816	2	ISM	ENSG00000253893.2	ENST00000519726.2	792	5	40946	-2608	40946	2608	3prime_fragment	FALSE	canonical	2	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTTCATTGTCATTACC	NA	False	NA	NA	False	AATAAA	-15	NA	8185668	8165210	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_-_8168084_8184725
H1_mix_00085311	chr8	-	1265	3	NNC	ENSG00000253252.2	novel	328	2	NA	NA	-867	9135	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	41	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTTGGAAGATGACCCC	13	False	NA	NA	False	AAAAAG	-45	NA	9183386	9171115	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_9172304_9182463_9182516_9183361
H1_mix_00085312	chr8	-	2655	4	NNC	ENSG00000253649.5	novel	1123	5	NA	NA	-26541	1585	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	13.2748718344932	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTTTTATCTGGCTTCC	NA	False	NA	-8	True	AATAAA	-15	NA	10574126	10481292	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_10483232_10484086_10484247_10498727_10498809_10573651
H1_mix_00085313	chr8	-	1753	6	FSM	ENSG00000258724.1	ENST00000554914.1	1753	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	88.7301527103386	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGTCCCTTCTGGTCCA	-10	True	NA	NA	False	NA	NA	NA	10839847	10725398	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_10726667_10826151_10826245_10831664_10831744_10832891_10832985_10834665_10834776_10839737
H1_mix_00085314	chr8	-	2456	8	NNC	ENSG00000254093.9	novel	1546	7	NA	NA	-17	1386	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	75.8564702687428	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCCTTTTGTTTTAAC	-19	True	NA	-2	True	AATAAA	-22	NA	10839901	10763574	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_10763706_10764207_10765917_10820192_10820270_10826151_10826245_10831664_10831744_10832891_10832985_10834665_10834776_10839737
H1_mix_00085315	chr8	-	4161	10	FSM	ENSG00000164733.22	ENST00000677671.1	4173	10	12	0	12	0	multi-exon	FALSE	canonical	0	0	junction_9	177.140942698877	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTTGATTCATTCCATG	NA	False	NA	-3	True	AATAAA	-19	NA	11869436	11842523	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_11845223_11845660_11845790_11847051_11847169_11847678_11847823_11848066_11848153_11849045_11849165_11850865_11850981_11852609_11852696_11853328_11853480_11868921
H1_mix_00085317	chr8	-	2432	11	FSM	ENSG00000164733.22	ENST00000530640.7	2432	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	167.503462650776	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGCACTCCAGCCTCG	0	True	NA	NA	False	NA	NA	NA	11868112	11843009	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_11844242_11845081_11845223_11845660_11845790_11847051_11847169_11847678_11847823_11848066_11848153_11849045_11849165_11850865_11850981_11852609_11852696_11853328_11853480_11868000
H1_mix_00085318	chr8	-	3431	8	NIC	ENSG00000186523.15	novel	778	7	NA	NA	0	1085	intron_retention	FALSE	canonical	3	12	junction_4	25.672187762047	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCTACTGCTTCTAGAAT	NA	False	NA	NA	False	NA	NA	NA	12194065	12181010	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_12183707_12185375_12185526_12186699_12186834_12188071_12188174_12188310_12188425_12189807_12189889_12191778_12191842_12193974
H1_mix_00085319	chr8	-	2268	6	FSM	ENSG00000186523.15	ENST00000534187.6	2254	6	0	-14	0	0	multi-exon	FALSE	canonical	3	23	junction_5	23.9365828806035	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACAGATGATCTGTGGCT	NA	False	NA	NA	False	AATAAA	-31	NA	12194105	12182095	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_12183707_12185375_12185526_12186699_12186834_12189807_12189889_12191778_12191842_12193876
H1_mix_00085320	chr8	-	2096	7	FSM	ENSG00000186523.15	ENST00000448228.7	2403	7	-38	345	7	105	multi-exon	FALSE	canonical	2	11	junction_2	25.9935889531759	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCACAACCCCCCTCACT	NA	False	NA	NA	False	NA	NA	NA	12194120	12182450	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_12183707_12185375_12185526_12186351_12186618_12186699_12186834_12189807_12189889_12191778_12191842_12193974
H1_mix_00085321	chr8	-	2043	8	FSM	ENSG00000186523.15	ENST00000533852.6	2043	8	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	26.7604642893129	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTGTCCCCACCCCATC	NA	False	NA	NA	False	NA	NA	NA	12194070	12182555	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_12183707_12185375_12185526_12186351_12186618_12186699_12186834_12188071_12188174_12189807_12189889_12191778_12191842_12193974
H1_mix_00085324	chr8	-	631	1	FSM	ENSG00000254527.1	ENST00000526818.1	631	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTTCATTCTAAAATGA	NA	False	NA	NA	False	NA	NA	NA	12206389	12205758	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_12205800_12206400
H1_mix_00085325	chr8	-	5623	4	NIC	ENSG00000283674.3	novel	5619	5	NA	NA	4405	339	combination_of_known_splicesites	FALSE	canonical	3	15	junction_3	9.41629792788369	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCCTCTGCCTGGGATGG	6262	False	NA	NA	False	NA	NA	NA	12601321	12504661	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_12509801_12511121_12511258_12518771_12518956_12601157
H1_mix_00085326	chr8	-	6137	7	NNC	ENSG00000283674.3	novel	5619	5	NA	NA	82	339	intron_retention	FALSE	canonical	0	0	junction_4	27.3886635104543	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCCTCTGCCTGGGATGG	5	True	NA	NA	False	NA	NA	NA	12607578	12504661	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_12509082_12509605_12509801_12511121_12511258_12518771_12518956_12580827_12581045_12601157_12601855_12607290
H1_mix_00085327	chr8	-	3439	3	Intergenic	novelGene_1440	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	3	junction_1	20	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTGTAAATTAAGTAAGTC	NA	False	NA	NA	False	TATAAA	-17	NA	12527695	12522007	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_-_12524276_12525624_12525733_12526632
H1_mix_00085328	chr8	-	2976	1	FSM	ENSG00000242607.1	ENST00000483613.1	781	1	-1271	-924	-1271	924	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTTATTTCACTTAACAC	NA	False	NA	10	True	AATAAA	-28	NA	12572401	12569425	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_12569400_12572400
H1_mix_00085329	chr8	-	5422	1	Intergenic	novelGene_1446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAAGCCAGGAGATGATAA	NA	False	NA	NA	False	NA	NA	NA	12589165	12583743	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_-_12583700_12589200
H1_mix_00085330	chr8	-	3481	2	Antisense	novelGene_ENSG00000255253.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	225	junction_1	0	168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAAGCCAGGAGATGATAA	NA	False	NA	NA	False	NA	NA	NA	12645417	12583743	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr8_-_12586303_12644495
H1_mix_00085331	chr8	-	365	1	FSM	ENSG00000254917.1	ENST00000533484.1	967	1	59	543	59	-543	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTCACCCTCTATATC	NA	False	NA	NA	False	NA	NA	NA	12697214	12696849	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_12696800_12697200
H1_mix_00085332	chr8	-	6058	15	NNC	ENSG00000164741.15	novel	4392	14	NA	NA	-9	19649	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	29.4678136416044	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCTCTTCCAAAAAGCCT	7957	False	NA	NA	False	AAAAAG	-17	NA	13133298	13063711	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_13063726_13083360_13085932_13086289_13086464_13088486_13088705_13090251_13090471_13091317_13091433_13092611_13092826_13094758_13094958_13095085_13095246_13098398_13098576_13099346_13100771_13102789_13102854_13110741_13110824_13115585_13115658_13132943
H1_mix_00085333	chr8	-	503	5	FSM	ENSG00000164741.15	ENST00000503161.6	562	5	59	0	-30	0	multi-exon	FALSE	canonical	0	0	junction_4	44.0511066830335	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGGAGGCACGCTGATGGA	NA	False	NA	NA	False	NA	NA	NA	13276814	13100605	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_13100771_13102789_13102854_13110741_13110824_13115585_13115658_13276694
H1_mix_00085334	chr8	-	706	1	FSM	ENSG00000250483.1	ENST00000502740.1	1135	1	53	376	53	-376	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCACTGATGACCCTG	NA	False	NA	NA	False	AATGAA	-30	NA	15807230	15806524	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_15806500_15807200
H1_mix_00085339	chr8	-	5816	1	FSM	ENSG00000104763.20	ENST00000523744.2	5740	1	-90	14	-90	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCGAGATCGCGCCACT	4803	False	NA	NA	False	NA	NA	NA	18068761	18062945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_18062900_18068800
H1_mix_00085340	chr8	-	2551	10	NIC	ENSG00000156011.18	novel	610	6	NA	NA	-122	-4	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	7.65135346697192	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTGTTTTTTTGTTGTTG	NA	False	NA	NA	False	AATAAA	-36	NA	19013825	18762888	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_18763026_18765448_18765539_18799294_18799354_18801269_18801383_18804521_18804603_18804703_18804899_18867673_18868070_18871625_18872734_18936033_18936143_19013562
H1_mix_00085341	chr8	-	5527	4	NNC	ENSG00000061337.15	novel	5706	4	NA	NA	-12961	-14	intron_retention	FALSE	canonical	3	16	junction_3	11.1455023315337	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCACGCCCTCTAGAGCCA	5284	False	NA	-15	True	AATAAA	-11	NA	20268253	20246178	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_20250364_20252781_20253586_20254836_20255316_20268194
H1_mix_00085342	chr8	-	3096	6	FSM	ENSG00000168490.14	ENST00000321613.7	3099	6	0	3	0	-3	multi-exon	TRUE	canonical	1	1	junction_4	7.63151361133557	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTTGAGCTGCTGTAAC	267	False	22232121	-8	True	AATAAA	-33	NA	22232101	22219706	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_22221888_22224225_22224344_22226850_22227026_22228192_22228387_22228787_22228910_22231795
H1_mix_00085343	chr8	-	4360	2	FSM	ENSG00000179388.9	ENST00000317216.3	4514	2	152	2	-150	-2	multi-exon	FALSE	canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTCTTGGTTTGTTT	-7	True	NA	47	True	CATAAA	-17	NA	22693328	22687660	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_22691483_22692790
H1_mix_00085344	chr8	-	1826	2	FSM	ENSG00000245025.3	ENST00000502083.2	1945	2	0	119	0	-119	multi-exon	FALSE	canonical	1	2	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCGTGACAGCACTGCC	-4	True	NA	NA	False	NA	NA	NA	23019335	23006499	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_23008118_23019127
H1_mix_00085345	chr8	-	1638	8	ISM	ENSG00000120889.13	ENST00000347739.3	1723	10	38149	-292	0	292	3prime_fragment	FALSE	canonical	3	140	junction_5	60.3462796648456	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAGCGGTGGAATTAGAG	NA	False	NA	NA	False	NA	NA	NA	23030872	23022018	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_-_23022985_23024187_23024261_23027132_23027289_23027721_23027754_23028330_23028442_23028528_23028603_23029609_23029722_23030758
H1_mix_00085347	chr8	-	346	1	FSM	ENSG00000253483.1	ENST00000523257.1	519	1	294	-121	294	121	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGGGGAATTTGGTGTGG	NA	False	NA	NA	False	NA	NA	NA	23483240	23482894	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_23482900_23483200
H1_mix_00085348	chr8	-	2303	3	FSM	ENSG00000120907.18	ENST00000380586.5	2304	3	21	-20	21	20	multi-exon	FALSE	canonical	0	0	junction_1	0	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGGGGATCAAGTAGTAA	1991	False	NA	NA	False	AATAAA	-15	NA	26865384	26748129	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_26748749_26770280_26770667_26864086
H1_mix_00085349	chr8	-	2734	9	NIC	ENSG00000120885.22	novel	2749	9	NA	NA	3	0	intron_retention	FALSE	canonical	3	27	junction_8	641.357142608547	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTTGGAGGGTCCTCTTT	13	False	NA	-28	True	AATAAA	-18	NA	27614687	27597995	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_27598251_27598459_27598636_27599779_27600010_27604290_27604396_27604923_27605336_27606353_27606525_27608937_27609087_27610474_27610601_27613577
H1_mix_00085351	chr8	-	4855	10	NIC	ENSG00000186918.14	novel	4797	10	NA	NA	-3	5	combination_of_known_junctions	FALSE	canonical	2	4	junction_9	26.786305695999	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCCTGTCCTTTGCCC	NA	False	NA	2	True	AATAAA	-22	NA	28375382	28345584	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_28348831_28349124_28349229_28350063_28350157_28351494_28351808_28352572_28352674_28353172_28353409_28356669_28356780_28359591_28359825_28360884_28361183_28375261
H1_mix_00085352	chr8	-	1276	8	NIC	ENSG00000214050.8	novel	1254	9	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_7	20.2091108974469	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGACAGATTTACGGATG	-8	True	NA	-45	True	AGTAAA	-20	NA	28490252	28428407	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_28428737_28447170_28447274_28452243_28452477_28456765_28456931_28463611_28463819_28473771_28473808_28483347_28483484_28490185
H1_mix_00085353	chr8	-	3919	2	FSM	ENSG00000246339.6	ENST00000659934.1	3909	2	0	-10	0	10	multi-exon	FALSE	canonical	3	3	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCAATAAAAAGTTTTTAAA	307	False	NA	NA	False	NA	NA	NA	28701112	28696227	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_28698475_28699440
H1_mix_00085354	chr8	-	588	2	FSM	ENSG00000104299.15	ENST00000520005.1	588	2	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATAACAAGCACTTGCT	NA	False	NA	NA	False	NA	NA	NA	28776271	28771005	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_28771081_28775758
H1_mix_00085355	chr8	-	1171	10	FSM	ENSG00000104299.15	ENST00000520983.5	1154	10	0	-17	0	17	multi-exon	FALSE	canonical	3	156	junction_4	20.7602421546808	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGAAATTTCATTTTGT	28	True	NA	NA	False	AATAAA	-26	NA	28889921	28793711	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_28793988_28796543_28796656_28812326_28812462_28813491_28813613_28835291_28835379_28837636_28837777_28846746_28846810_28850212_28850274_28859435_28859564_28889873
H1_mix_00085357	chr8	-	4642	2	Antisense	novelGene_ENSG00000254013.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	0	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTGCTTGGAAAGTCTC	93	False	NA	NA	False	AATATA	-25	NA	30033639	30023678	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr8_-_30028202_30033520
H1_mix_00085358	chr8	-	1578	9	NNC	ENSG00000197265.9	novel	1747	8	NA	NA	0	58861	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	123.841632741175	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGATCCTCCCACGTAGG	-19	True	NA	NA	False	AAAAAG	-2	NA	30658236	30519456	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_30519493_30578522_30579038_30580280_30580397_30607056_30607151_30612298_30612482_30614607_30614716_30635031_30635124_30653432_30653603_30657972
H1_mix_00085359	chr8	-	1973	8	NNC	ENSG00000104695.13	novel	1946	7	NA	NA	0	60254	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	133.012812026757	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCATATAGAACAAAATGTGA	-13	True	NA	NA	False	NA	NA	NA	30812818	30714202	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_30714230_30785615_30786308_30791196_30791316_30793916_30794079_30794191_30794282_30797580_30797755_30799545_30799756_30812319
H1_mix_00085360	chr8	-	1298	1	FSM	ENSG00000172733.12	ENST00000475541.2	2866	1	927	641	568	-641	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATGCAAATCAGCACAAAAT	975	False	NA	NA	False	NA	NA	NA	31032788	31031490	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_31031500_31032800
H1_mix_00085361	chr8	-	9395	1	FSM	ENSG00000272338.2	ENST00000606064.2	577	1	-8818	0	-8818	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGCTTGTGTGTTTA	7342	False	NA	-3	True	AATAAA	-35	NA	33370233	33360838	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_33360800_33370200
H1_mix_00085363	chr8	-	3030	4	NIC	ENSG00000172728.16	novel	3549	5	NA	NA	0	329	intron_retention	FALSE	canonical	3	27	junction_1	41.2337510083939	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTTTAAGAAAGCAACGT	-10	True	NA	35	True	NA	NA	NA	33473134	33370494	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_33372805_33453215_33453511_33461371_33461726_33473063
H1_mix_00085364	chr8	-	5198	18	NNC	ENSG00000077782.22	novel	5697	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	280.16257020513	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGATTACTGCTAAATAC	-1	True	NA	-55	True	ATTAAA	-12	NA	38468635	38411641	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_38413805_38413917_38414024_38414151_38414290_38414558_38414630_38414778_38414902_38415869_38416061_38417305_38417417_38417869_38417992_38418227_38418373_38419531_38419736_38421796_38421942_38424508_38424700_38426121_38426246_38427920_38428094_38428345_38428436_38429681_38429949_38457355_38457535_38467980
H1_mix_00085366	chr8	-	3827	17	FSM	ENSG00000077782.22	ENST00000684654.1	3827	17	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_15	307.60023137792	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTATCTATGGGCTGTAT	1	True	NA	-21	True	AATAAA	-15	NA	38468633	38412731	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38413805_38413917_38414024_38414151_38414290_38414558_38414630_38414778_38414902_38415869_38416061_38417305_38417417_38417869_38417992_38418227_38418374_38419538_38419736_38421796_38421942_38424508_38424700_38426121_38426246_38427920_38428094_38428351_38428436_38457355_38457535_38467980
H1_mix_00085367	chr8	-	2680	14	NNC	ENSG00000077782.22	novel	4442	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	265.86226803014	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGCCGACAAGGCCGC	5	True	NA	NA	False	TATAAA	-13	NA	38468601	38414778	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_38414902_38415869_38416061_38417305_38417417_38417869_38417992_38418227_38418373_38419531_38419736_38421796_38421942_38424508_38424700_38426121_38426246_38427920_38428094_38428351_38428436_38429681_38429949_38457355_38457535_38467980
H1_mix_00085371	chr8	-	1318	1	FSM	ENSG00000239218.2	ENST00000488192.1	1318	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGCA	NA	False	NA	NA	False	AATAAA	-19	NA	38435664	38434346	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_38434300_38435700
H1_mix_00085372	chr8	-	1253	5	NNC	ENSG00000169490.17	novel	3239	4	NA	NA	0	7745	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	203.898871992956	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCTCATTTTTTTCCTT	23	True	NA	NA	False	NA	NA	NA	38996483	38981062	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_38981098_38990802_38991546_38993544_38993661_38995317_38995406_38996212
H1_mix_00085373	chr8	-	248	1	FSM	ENSG00000271938.1	ENST00000605981.1	292	1	-40	84	-40	-84	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACCTTTTGAATTTTGCC	1934	False	NA	NA	False	AAGAAA	-29	NA	42139792	42139544	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_42139500_42139800
H1_mix_00085374	chr8	-	2405	13	FSM	ENSG00000104368.19	ENST00000352041.7	2516	13	111	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	5.08811250749125	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCAGAGTGGAATGGTT	-1	True	NA	-6	True	AATAAA	-28	NA	42207565	42175236	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_42176152_42178896_42179064_42179925_42180067_42180241_42180379_42180489_42180686_42181936_42182023_42182718_42182891_42185080_42185173_42187397_42187573_42187905_42188017_42191371_42191415_42193113_42193212_42207493
H1_mix_00085375	chr8	-	966	1	FSM	ENSG00000240395.1	ENST00000496040.1	868	1	-116	18	-116	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGCTGCAGAGAGCTAAAC	NA	False	NA	NA	False	NA	NA	NA	42342750	42341784	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_42341800_42342800
H1_mix_00085376	chr8	-	890	4	FSM	ENSG00000104371.5	ENST00000220812.3	896	4	12	-6	12	6	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTGGACATTAACTTTAAA	12	False	NA	NA	False	AATAAA	-29	NA	42377217	42374056	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_42374360_42374760_42374914_42375679_42375831_42376934
H1_mix_00085378	chr8	-	1992	3	FSM	ENSG00000019549.13	ENST00000020945.4	2180	3	0	188	0	82	multi-exon	FALSE	canonical	0	0	junction_2	2.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGTTTTGATTTAAAATC	-1	True	NA	NA	False	TTTAAA	-29	NA	48921429	48917785	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_48918989_48919895_48920442_48921186
H1_mix_00085379	chr8	-	1326	6	NIC	ENSG00000168300.14	novel	814	4	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	58.8713852393504	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATAATTTTTCATCTTGA	18	True	NA	NA	False	ATTAAA	-18	NA	51899021	51826928	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_51827362_51831443_51831568_51833517_51833690_51845660_51845764_51860844_51861247_51898929
H1_mix_00085380	chr8	-	262	2	FSM	ENSG00000147488.12	ENST00000518453.1	573	2	302	9	302	-9	multi-exon	FALSE	canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGCGACATTTTTATTT	NA	False	NA	NA	False	AAAAAG	-5	NA	52221793	52220740	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_52220849_52221639
H1_mix_00085381	chr8	-	1230	3	FSM	ENSG00000082556.14	ENST00000520287.5	1602	3	372	0	372	0	multi-exon	FALSE	canonical	3	7	junction_1	0.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGACATGAAAAGATAGAATT	608	False	NA	NA	False	NA	NA	NA	53251040	53229212	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_53229830_53234758_53235112_53250780
H1_mix_00085382	chr8	-	1653	2	Intergenic	novelGene_1466	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACAGTAAACATCTCTCC	NA	False	NA	NA	False	NA	NA	NA	54228429	54226464	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_-_54226779_54227090
H1_mix_00085383	chr8	-	771	1	FSM	ENSG00000226098.4	ENST00000518383.1	499	1	18	-290	18	290	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTAAAAGATTGAGCCAAAA	NA	False	NA	NA	False	NA	NA	NA	54523279	54522508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_54522500_54523300
H1_mix_00085384	chr8	-	2858	3	FSM	ENSG00000167904.16	ENST00000519460.1	2588	3	-270	0	-270	0	multi-exon	FALSE	canonical	3	96	junction_1	10.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGTTGCAGTTAATTTT	-1	True	NA	-14	True	AATAAA	-1	NA	55746317	55738757	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_55740219_55743480_55743621_55745060
H1_mix_00085385	chr8	-	2551	8	NIC	ENSG00000167904.16	novel	2573	8	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_7	37.4242091241943	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGTTGCAGTTAATTTT	29	True	NA	-14	True	AATAAA	-1	NA	55773314	55738757	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_55740219_55743480_55743621_55745060_55745122_55750963_55751158_55756243_55756412_55762634_55763029_55763935_55763981_55773226
H1_mix_00085386	chr8	-	1288	1	NIC	ENSG00000008988.11	novel	712	5	NA	NA	5600	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTCTTTGAGATTTTGC	5961	False	NA	-11	True	AATAAA	-14	NA	56068544	56067256	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_56067300_56068500
H1_mix_00085388	chr8	-	6625	4	NNC	ENSG00000181690.8	novel	7311	5	NA	NA	0	57382	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27.6204433144888	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCATCACCACTCCCTGA	9	True	NA	NA	False	NA	NA	NA	56211273	56103526	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_56103555_56161158_56167504_56171090_56171190_56211120
H1_mix_00085389	chr8	-	7311	5	FSM	ENSG00000181690.8	ENST00000316981.8	7311	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	7.69740215917033	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAATGTAGATCTTCCTGA	9	True	NA	-19	True	AATAAA	-18	NA	56211273	56160908	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_56167504_56168027_56168387_56171090_56171190_56179408_56179514_56211120
H1_mix_00085390	chr8	-	7038	4	NIC	ENSG00000181690.8	novel	7311	5	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_3	18.5172592164415	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAATGTAGATCTTCCTGA	NA	False	NA	-19	True	AATAAA	-18	NA	56211359	56160908	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_56167504_56171090_56171190_56179408_56179514_56211120
H1_mix_00085391	chr8	-	1256	4	FSM	ENSG00000181195.11	ENST00000451791.7	1251	4	0	-5	0	2	multi-exon	FALSE	canonical	1	1	junction_2	1.69967317119759	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTAAGTCTCTTTTTC	0	True	NA	NA	False	AATAAA	-24	NA	56446641	56440951	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_56441938_56445815_56445957_56446425_56446482_56446568
H1_mix_00085395	chr8	-	1296	1	FSM	ENSG00000255397.1	ENST00000529239.1	2167	1	993	-122	993	122	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTTTTCTTAATTATTG	NA	False	NA	NA	False	AATAAA	-29	NA	60938878	60937582	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_60937600_60938900
H1_mix_00085396	chr8	-	5246	24	NIC	ENSG00000198363.18	novel	5301	25	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_21	137.76580769326	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCATTTCTAGTCTTCT	8464	False	61714610	-6	True	AATAAA	-19	NA	61714594	61500555	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_61503510_61517527_61517662_61518031_61518124_61525976_61526113_61548070_61548209_61553030_61553121_61555923_61556023_61562743_61562881_61567167_61567319_61576771_61576859_61583943_61584030_61618977_61619020_61633682_61633728_61637946_61638004_61638321_61638364_61642887_61642921_61643385_61643434_61644599_61644633_61646749_61646879_61651049_61651125_61653567_61653661_61680967_61681037_61684038_61684189_61714268
H1_mix_00085397	chr8	-	2874	15	FSM	ENSG00000198363.18	ENST00000519234.5	2874	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	166.105649316012	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGTCATTATTTTTGA	24	True	NA	-12	True	AATAAA	-17	NA	61714525	61624536	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_61626281_61633682_61633728_61637946_61638004_61638321_61638361_61642887_61642921_61643385_61643434_61643944_61644002_61644599_61644633_61646749_61646879_61651049_61651125_61653567_61653661_61680967_61681037_61682438_61682484_61684038_61684189_61714268
H1_mix_00085398	chr8	-	333	1	FSM	ENSG00000222898.1	ENST00000410966.1	333	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAGAGGATGTAAGGCTG	NA	False	NA	NA	False	CATAAA	-41	NA	61632012	61631679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_61631700_61632000
H1_mix_00085400	chr8	-	368	1	FSM	ENSG00000272010.1	ENST00000606963.1	623	1	191	64	191	-64	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCAAATATGTAAGTGTAA	NA	False	NA	NA	False	NA	NA	NA	65592281	65591913	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_65591900_65592300
H1_mix_00085402	chr8	-	2532	4	FSM	ENSG00000261787.2	ENST00000563496.2	2451	4	17	-98	17	98	multi-exon	FALSE	canonical	1	2	junction_2	4.02768199119819	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTTTACCGCGCTTTTT	9	True	NA	91	True	NA	NA	NA	66962574	66946402	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_66948165_66961375_66961789_66961876_66961988_66962328
H1_mix_00085403	chr8	-	8997	10	FSM	ENSG00000137571.11	ENST00000260126.9	8991	10	0	-6	0	6	multi-exon	FALSE	canonical	1	1	junction_4	3.19722101554181	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTAGAACTTTGTTGT	0	True	NA	NA	False	AATAAA	-23	NA	69834978	69667039	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_69673327_69676608_69676674_69679377_69679620_69682183_69682344_69705030_69705230_69738039_69738205_69755423_69755642_69761742_69761876_69831766_69833170_69834853
H1_mix_00085404	chr8	-	8378	22	NNC	ENSG00000140396.13	novel	8430	23	NA	NA	28265	0	intron_retention	FALSE	canonical	3	12	junction_21	14.6194353911655	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGCTTTAGAGATTTTAA	1042	False	NA	-19	True	AATAAA	-22	NA	70217110	70109781	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_70113644_70121301_70121392_70123883_70124083_70124687_70124866_70126812_70127048_70128432_70128511_70128701_70128981_70131836_70132003_70138202_70138333_70141183_70141400_70144641_70144849_70148272_70148484_70155970_70157241_70159504_70159653_70162710_70162855_70163464_70163567_70166565_70166755_70170201_70170380_70174755_70174860_70213902_70214076_70216659_70216765_70216996
H1_mix_00085405	chr8	-	8468	23	NNC	ENSG00000140396.13	novel	8430	23	NA	NA	464	0	intron_retention	FALSE	canonical	1	6	junction_22	15.1469387027913	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGCTTTAGAGATTTTAA	864	False	NA	-19	True	AATAAA	-22	NA	70403344	70109781	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_70113644_70121301_70121392_70123883_70124083_70124687_70124866_70126812_70127048_70128432_70128511_70128701_70128981_70131836_70132003_70138202_70138333_70141183_70141400_70144641_70144849_70148272_70148484_70155970_70157241_70159504_70159653_70162710_70162855_70163464_70163567_70166565_70166755_70170201_70170380_70174755_70174860_70213902_70214076_70216659_70216765_70296743_70296801_70403197
H1_mix_00085406	chr8	-	1957	2	FSM	ENSG00000178860.9	ENST00000325509.5	1956	2	0	-1	0	1	multi-exon	FALSE	canonical	3	21	junction_1	0	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCTTGGAGGTGTCAGGA	3	True	NA	-16	True	AATAAA	-44	NA	71844412	71841558	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_71842748_71843644
H1_mix_00085408	chr8	-	2863	14	NIC	ENSG00000040341.18	novel	2970	15	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_13	161.261080533012	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTGTTGTTGTTCTTTTG	14	True	NA	0	True	AGTAAA	-24	NA	73747468	73420368	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_73421466_73422613_73422703_73552011_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73738283_73738350_73739755_73739869_73747386
H1_mix_00085410	chr8	-	2158	15	NIC	ENSG00000040341.18	novel	2970	15	NA	NA	7	-5	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	174.526136864882	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGAAATCTGATCCTGCT	773	False	NA	32	True	NA	NA	NA	73746811	73421134	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_73421466_73422613_73422703_73527690_73527805_73552011_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73738283_73738350_73739755_73739869_73746782
H1_mix_00085412	chr8	-	766	5	FSM	ENSG00000104343.21	ENST00000523278.5	850	5	2	82	2	-82	multi-exon	FALSE	canonical	1	4	junction_1	128.173710252922	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGATTCTGCTGACACC	NA	False	NA	NA	False	NA	NA	NA	73830472	73780178	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_73780518_73805650_73805727_73810473_73810630_73825146_73825250_73830380
H1_mix_00085413	chr8	-	719	6	FSM	ENSG00000154582.18	ENST00000523815.5	719	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	1812.34544168599	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTGAACTATATAAAGTTC	385	False	NA	45	True	NA	NA	NA	73971908	73946533	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73964486_73964626_73970578_73970635_73971869
H1_mix_00085415	chr8	-	2250	5	FSM	ENSG00000164683.18	ENST00000337919.9	2296	5	20	26	-1	5	multi-exon	FALSE	canonical	1	2	junction_2	3.20156211871642	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGACTAAATAAAAAAGAAAG	-4	True	NA	NA	False	NA	NA	NA	79767837	79764038	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_79765772_79766650_79766733_79766996_79767093_79767218_79767295_79767574
H1_mix_00085416	chr8	-	494	1	FSM	ENSG00000272518.1	ENST00000606512.1	917	1	-47	470	-47	-470	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCGTTAATGGACAGTGCT	NA	False	NA	NA	False	NA	NA	NA	79957428	79956934	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_79956900_79957400
H1_mix_00085418	chr8	-	577	1	FSM	ENSG00000272264.1	ENST00000607017.1	577	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGTCAATAGCTACTATTC	NA	False	NA	NA	False	AGTAAA	-21	NA	80033300	80032723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_80032700_80033300
H1_mix_00085419	chr8	-	234	1	FSM	ENSG00000241746.1	ENST00000478813.1	628	1	391	3	391	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCCCAGTAAAGACTGTT	412	False	NA	NA	False	AATACA	-33	NA	80265764	80265530	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_80265500_80265800
H1_mix_00085420	chr8	-	1502	1	FSM	ENSG00000277604.1	ENST00000516058.1	95	1	-1442	35	-1442	-35	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTCTTTCCCCACTTCCA	1376	False	NA	NA	False	NA	NA	NA	80486125	80484623	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_80484600_80486100
H1_mix_00085421	chr8	-	235	1	FSM	ENSG00000254331.1	ENST00000522230.1	235	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAAGCTGGCAAGCTGC	NA	False	NA	NA	False	AAAACA	-4	NA	80645173	80644938	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_80644900_80645200
H1_mix_00085422	chr8	-	305	1	FSM	ENSG00000260493.1	ENST00000566000.1	1264	1	1080	-121	1059	121	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAACCTATCCAAGAAAGGC	1618	False	NA	NA	False	AGTAAA	-35	NA	85175982	85175677	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_85175700_85176000
H1_mix_00085424	chr8	-	2880	3	FSM	ENSG00000251136.10	ENST00000661105.1	2880	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCCCGAAACCTAAAATAAA	28	True	NA	-46	True	NA	NA	NA	89757651	89585871	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_89588051_89596418_89596513_89757044
H1_mix_00085426	chr8	-	4227	5	FSM	ENSG00000251136.10	ENST00000653574.1	4227	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	9.35414346693485	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGATGATATAACTTTAACT	1560	False	NA	NA	False	ACTAAA	-12	NA	89757812	89718519	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_89721375_89722014_89722157_89724628_89724967_89725517_89725642_89757044
H1_mix_00085427	chr8	-	786	5	FSM	ENSG00000104320.14	ENST00000613033.1	786	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	81.4382434731988	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTTCCTACACAAATGAT	NA	False	NA	NA	False	TTTAAA	-1	NA	89953354	89935170	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_89935613_89937025_89937076_89943252_89943367_89947823_89947893_89953243
H1_mix_00085428	chr8	-	2554	12	NNC	ENSG00000104327.7	novel	2533	11	NA	NA	0	1653	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	83.2488056152377	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGTTGAACAAATATTTC	7	True	NA	NA	False	NA	NA	NA	90082871	90056954	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_90056987_90058610_90060287_90060628_90060701_90063099_90063154_90063280_90063321_90063405_90063462_90065897_90065976_90068997_90069055_90069153_90069238_90078372_90078448_90082025_90082103_90082618
H1_mix_00085429	chr8	-	5874	2	FSM	ENSG00000079102.16	ENST00000521078.1	781	2	178	-5271	178	-2	multi-exon	FALSE	canonical	3	32	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGGTCAGTCTATTC	NA	False	NA	-1	True	AATAAA	-23	NA	91970982	91954968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_91960518_91970657
H1_mix_00085430	chr8	-	7625	13	FSM	ENSG00000079102.16	ENST00000617740.4	7627	13	0	2	0	-2	multi-exon	FALSE	canonical	1	1	junction_12	8.08762772524937	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGGTCAGTCTATTC	-4	True	NA	-1	True	AATAAA	-23	NA	92095654	91954968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_91960518_91970657_91970849_91975904_91975974_91986123_91986326_91986886_91986973_91991638_91991890_92005115_92005298_92011001_92011092_92014578_92014821_92017225_92017364_92075964_92076138_92095027_92095172_92095346
H1_mix_00085432	chr8	-	3924	13	FSM	ENSG00000164944.12	ENST00000421249.2	3924	13	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_8	11.9660979437743	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCTTCCTGAACAGTTT	NA	False	NA	-1	True	ATTAAA	-37	NA	94553529	94510732	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_94511730_94511995_94512090_94514868_94514952_94517787_94517943_94518984_94519477_94526222_94527364_94529069_94529343_94530962_94531086_94534838_94535008_94537102_94537152_94538259_94538347_94543826_94543943_94553384
H1_mix_00085434	chr8	-	982	5	FSM	ENSG00000156467.10	ENST00000521036.5	982	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2664.3391652528	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGGTATGCACCCCCTAG	-5	True	NA	-35	True	AATAAA	-4	NA	96235546	96230714	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_96231133_96231225_96231516_96231773_96231941_96233155_96233228_96235511
H1_mix_00085435	chr8	-	518	4	FSM	ENSG00000156467.10	ENST00000517523.1	515	4	0	-3	0	0	multi-exon	FALSE	canonical	3	25	junction_2	2814.33722215373	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGTTTTTGAATTCCAA	2339	False	NA	-42	True	AATAAA	-16	NA	96233219	96230935	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_96231133_96231531_96231622_96231773_96231941_96233155
H1_mix_00085446	chr8	-	2998	14	FSM	ENSG00000070756.17	ENST00000676976.1	2998	14	0	0	0	0	multi-exon	FALSE	canonical	3	6497	junction_10	797.550621642815	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGTTTTATGTAAAAGGC	3734	False	NA	NA	False	NA	NA	NA	100718994	100702794	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_100703360_100704296_100704391_100704925_100705057_100705588_100705674_100706650_100706806_100706886_100706998_100709132_100709224_100709458_100709732_100712361_100712458_100712651_100712790_100713086_100713182_100715461_100715602_100717772_100717889_100718086
H1_mix_00085451	chr8	-	785	3	FSM	ENSG00000120963.12	ENST00000519744.5	785	3	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	748.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTATCTGCTGCCTTAG	669	False	NA	NA	False	NA	NA	NA	101205568	101198725	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_101199240_101201606_101201744_101205434
H1_mix_00085453	chr8	-	4404	12	FSM	ENSG00000155096.15	ENST00000681985.1	4404	12	0	0	0	0	multi-exon	FALSE	canonical	2	33	junction_10	520.118247839409	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAAATTAAGCTAGATTT	8237	False	NA	-80	True	AATAGA	-2	NA	102864192	102826110	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_102828679_102829271_102829487_102829820_102829937_102833055_102833219_102834188_102834264_102834665_102834748_102836255_102836391_102838743_102838917_102839649_102839824_102843550_102843730_102858012_102858151_102863806
H1_mix_00085454	chr8	-	4236	13	FSM	ENSG00000155096.15	ENST00000682014.1	4229	13	0	-7	0	0	multi-exon	FALSE	canonical	0	0	junction_3	764.900247672132	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTATTCCTCATGTTT	8237	False	NA	29	True	GATAAA	-1	NA	102864192	102826371	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_102828679_102829271_102829487_102829820_102829934_102830125_102830222_102833055_102833219_102834188_102834264_102834665_102834748_102836255_102836391_102838743_102838917_102839649_102839824_102843550_102843730_102858012_102858151_102863806
H1_mix_00085462	chr8	-	2307	12	FSM	ENSG00000104408.11	ENST00000523674.2	2307	12	0	0	0	0	multi-exon	FALSE	canonical	3	3496	junction_3	293.142647136591	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCATGGTATTGATGTG	-4	True	NA	NA	False	NA	NA	NA	108248719	108201215	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_108201924_108202982_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108248612
H1_mix_00085463	chr8	-	2107	13	FSM	ENSG00000104408.11	ENST00000676892.1	2107	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1102.20033405406	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCATGGTATTGATGTG	NA	False	NA	NA	False	NA	NA	NA	108248775	108201215	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_108201924_108202982_108203145_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108248612
H1_mix_00085464	chr8	-	1513	13	FSM	ENSG00000104408.11	ENST00000676706.1	1513	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	1094.56357043445	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTTGCATGTGCAAGT	-11	True	NA	-16	True	AATAAA	-26	NA	108248726	108201731	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236162_108236204_108239957_108240076_108241798_108241914_108248612
H1_mix_00085465	chr8	-	2822	12	FSM	ENSG00000104408.11	ENST00000677501.1	2819	12	0	-3	0	0	multi-exon	FALSE	canonical	3	170	junction_11	1093.92786865414	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCAGTTTTCTTGCAT	5053	False	NA	-24	True	AATAAA	-18	NA	108243662	108201739	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108243292
H1_mix_00085466	chr8	-	5608	8	FSM	ENSG00000104408.11	ENST00000677696.1	2077	8	-3398	-133	-1920	0	multi-exon	FALSE	canonical	3	3496	junction_4	172.60264618304	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTGAAGAATTGGAATAAA	1203	False	NA	17	True	TATAAA	-40	NA	108233828	108201776	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069
H1_mix_00085473	chr8	-	5164	27	FSM	ENSG00000064313.13	ENST00000686879.1	5016	27	26	-174	3	-7	multi-exon	FALSE	canonical	0	0	junction_26	41.7055223167865	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGATCATTCTGTCTTT	9	True	NA	-25	True	AATAAA	-10	NA	119832829	119730780	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_119732187_119742533_119742657_119744287_119744394_119744880_119745037_119746704_119746935_119756005_119756116_119758072_119758143_119760598_119760739_119762414_119762609_119778018_119778130_119781052_119781194_119783380_119783634_119785200_119785267_119788337_119788448_119788789_119788905_119789591_119789747_119791323_119791460_119793365_119793452_119795531_119795632_119796989_119797104_119797661_119797847_119801793_119802026_119803877_119804020_119806282_119806402_119819345_119819507_119831676_119831732_119832481
H1_mix_00085478	chr8	-	4304	3	FSM	ENSG00000165156.15	ENST00000522595.5	1114	3	-82	-3108	-79	2	multi-exon	FALSE	canonical	0	0	junction_2	23	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGCATGTTCCTTAAAT	11	True	NA	2	True	AATAAA	-21	NA	123274566	123252426	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_123256172_123267272_123267387_123274121
H1_mix_00085480	chr8	-	5104	4	FSM	ENSG00000170873.19	ENST00000524243.5	355	4	-574	-4175	-99	4175	multi-exon	FALSE	canonical	0	0	junction_1	16.739839372653	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTATTAGCTATGAATGAA	375	False	NA	NA	False	TTTAAA	-14	NA	124728572	124693863	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_124698143_124699525_124699600_124704129_124704192_124727883
H1_mix_00085495	chr8	-	907	5	Intergenic	novelGene_1509	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	59.6463536186413	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGCTATGAACTATGAGT	NA	False	NA	NA	False	ATTAAA	-17	NA	137413588	137233271	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_-_137233676_137240841_137241017_137384218_137384249_137384632_137384678_137413335
H1_mix_00085502	chr8	-	4119	21	NIC	ENSG00000167632.18	novel	6899	23	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	20.0259831219344	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGCCTCCCTGCATCTG	3	True	NA	-16	True	AATAAA	-16	NA	140457740	139730344	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_139731229_139731978_139732203_139885878_139885970_139910146_139910301_139988725_139988837_140023936_140024080_140221458_140221584_140252776_140252930_140275657_140275822_140283888_140284022_140287607_140287735_140290992_140291079_140300468_140300615_140311247_140311375_140360049_140360194_140370963_140371181_140397619_140397746_140405576_140405699_140439051_140439198_140450789_140451384_140457638
H1_mix_00085507	chr8	-	4283	31	NIC	ENSG00000169398.19	novel	4414	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	118.275103043709	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGGTTCTGTTTCTTC	NA	False	NA	0	True	ATTAAA	-38	NA	140890768	140658381	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_140659679_140664916_140664998_140668268_140668425_140669726_140669736_140674297_140674405_140675459_140675500_140686631_140686695_140700890_140701023_140702569_140702708_140706118_140706206_140717597_140717710_140735250_140735456_140739017_140739108_140743229_140743331_140744651_140744768_140746759_140746861_140752231_140752317_140761164_140761263_140764233_140764291_140789473_140789527_140793353_140793385_140800458_140800577_140803542_140803651_140818276_140818355_140818879_140819021_140830471_140830527_140846259_140846323_140846598_140846679_140864311_140864400_140879470_140879638_140890542
H1_mix_00085508	chr8	-	4452	32	NIC	ENSG00000169398.19	novel	4955	32	NA	NA	13	3	combination_of_known_junctions	FALSE	canonical	3	40	junction_30	116.923420957336	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTCTTTTGGTTCTGTTT	12	True	NA	-4	True	ATTAAA	-34	NA	141001247	140658385	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_140659679_140664916_140664998_140668268_140668425_140674297_140674405_140675459_140675500_140686631_140686695_140700890_140701023_140702569_140702708_140706118_140706206_140717597_140717710_140735250_140735456_140739017_140739108_140743229_140743331_140744651_140744768_140746759_140746861_140752231_140752317_140761164_140761263_140764233_140764291_140789473_140789527_140793353_140793385_140800458_140800577_140803542_140803651_140818276_140818355_140818879_140819021_140830471_140830527_140846259_140846323_140846598_140846679_140864311_140864400_140879470_140879638_140890542_140890770_140948665_140948724_141001124
H1_mix_00085518	chr8	-	2207	10	FSM	ENSG00000104529.19	ENST00000442189.6	2207	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_9	1512.14403422654	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	-1	True	NA	-34	True	ATTAAA	-14	NA	143597415	143579727	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586853_143588990_143590082_143590607_143590739_143597347
H1_mix_00085523	chr8	-	3069	22	NIC	ENSG00000180900.20	novel	5143	36	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_16	78.0463261463556	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGCCTGTCCATCCCCC	7109	False	NA	-1	True	AATAAA	-21	NA	143808677	143790919	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_143791309_143791388_143791441_143791875_143791914_143791990_143792134_143792219_143792406_143792484_143792636_143792707_143792868_143792975_143793084_143793899_143793963_143795037_143795113_143795276_143795334_143795419_143795531_143803382_143803572_143803646_143803941_143804045_143804157_143804567_143804826_143804954_143805015_143805111_143805436_143806406_143806485_143806923_143807014_143807551_143807615_143808608
H1_mix_00085540	chr8	-	3508	20	NIC	ENSG00000160957.15	novel	3896	20	NA	NA	25	0	intron_retention	FALSE	canonical	3	24	junction_17	93.0615916143444	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCCCTCTTGGCCAATGA	8	True	NA	-6	True	AATAAA	-21	NA	144517808	144511287	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_144511556_144511680_144511790_144511910_144512068_144512143_144512325_144512391_144512562_144512641_144512772_144512846_144513139_144513217_144513481_144513570_144513713_144513927_144514108_144514188_144514363_144514441_144514526_144514935_144515073_144515149_144515243_144515325_144515458_144515763_144515891_144515987_144516414_144517049_144517191_144517413_144517509_144517601
H1_mix_00085541	chr8	-	3780	21	NIC	ENSG00000160957.15	novel	3819	21	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_13	102.441397881911	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCCCTCTTGGCCAATGA	-8	True	NA	-6	True	AATAAA	-21	NA	144517824	144511287	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_144511556_144511680_144511790_144511910_144512068_144512143_144512325_144512391_144512562_144512641_144512772_144512846_144513139_144513217_144513481_144513570_144513713_144513927_144514108_144514188_144514363_144514441_144514526_144514935_144515043_144515149_144515243_144515325_144515458_144515763_144515891_144515987_144516765_144517049_144517191_144517413_144517509_144517601_144517636_144517700
H1_mix_00085542	chr8	-	3786	20	NNC	ENSG00000160957.15	novel	3819	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	25	junction_4	92.9229866095748	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAAAATGCAGAATAAAAAA	-17	True	NA	-43	True	NA	NA	NA	144517833	144511324	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_144511556_144511680_144511790_144511910_144512068_144512143_144512264_144512391_144512562_144512641_144512772_144512846_144513139_144513217_144513481_144513570_144513713_144513927_144514108_144514188_144514363_144514441_144514526_144514935_144515073_144515149_144515243_144515325_144515458_144515763_144515891_144515987_144516765_144517049_144517191_144517413_144517509_144517601
H1_mix_00085543	chr8	-	1888	13	NIC	ENSG00000160957.15	novel	3819	21	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_9	101.362762996192	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCGGCATGGACAGAGCTG	-7	True	NA	NA	False	NA	NA	NA	144517823	144513570	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_144513713_144513927_144514108_144514188_144514363_144514441_144514526_144514935_144515073_144515149_144515243_144515325_144515458_144515763_144515891_144515987_144516414_144517049_144517191_144517413_144517509_144517601_144517636_144517700
H1_mix_00085545	chr8	-	2890	8	NIC	ENSG00000147799.12	novel	4830	12	NA	NA	8	1	intron_retention	FALSE	canonical	1	1	junction_4	29.5972971738975	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTCCTCCCGTTCCTTGTG	2	True	NA	1	True	AATAAA	-18	NA	144685838	144529177	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_144530872_144532304_144532397_144533125_144533326_144534128_144534203_144555559_144555644_144580845_144581278_144605534_144605696_144685685
H1_mix_00085546	chr8	-	4726	11	NIC	ENSG00000147799.12	novel	4830	12	NA	NA	8	-3	combination_of_known_junctions	FALSE	canonical	3	31	junction_5	19.4781929346641	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGCGTCCTCCCGTTCCT	2	True	NA	-3	True	AATAAA	-14	NA	144685838	144529181	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_144530617_144530701_144530872_144532304_144532397_144533125_144533326_144534128_144534203_144545248_144545811_144547126_144548490_144555559_144555644_144580845_144581278_144605534_144605696_144685685
H1_mix_00085547	chr8	-	4003	12	NNC	ENSG00000147799.12	novel	4830	12	NA	NA	-31	-817	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	24.853953574119	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCCCAGCCCCGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	144685877	144529995	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_144530617_144530701_144530872_144532304_144532397_144533166_144533326_144534128_144534203_144537720_144537814_144545248_144545811_144547126_144548490_144555559_144555644_144580845_144581278_144605534_144605696_144685685
H1_mix_00085548	chr8	-	3458	4	ISM	ENSG00000198169.9	ENST00000292562.12	2953	5	96	0	6	0	intron_retention	FALSE	canonical	3	48	junction_1	23.3380947522857	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTCTTTGGGCTTTGACA	45	True	NA	-6	True	AATAAA	-20	NA	144755435	144720908	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr8_-_144723383_144753682_144753797_144754191_144754322_144754695
H1_mix_00085549	chr8	-	2747	4	NIC	ENSG00000198169.9	novel	2953	5	NA	NA	0	-8	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	42.0819306696935	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGTATAGTTCTTTGGG	39	True	NA	-14	True	AATAAA	-12	NA	144755441	144720916	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_144723383_144753682_144753797_144754191_144754322_144755404
H1_mix_00085554	chr8	-	876	6	FSM	ENSG00000161016.18	ENST00000529920.5	876	6	0	0	0	0	multi-exon	FALSE	canonical	2	75	junction_2	12835.9019098776	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGGGCCTCAATAAAGTT	1397	False	NA	-51	True	NA	NA	NA	144792143	144789801	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_-_144789963_144790354_144790471_144790677_144790764_144791276_144791496_144791772_144791915_144791991
H1_mix_00085555	chr8	-	1013	7	NIC	ENSG00000161016.18	novel	876	6	NA	NA	0	0	intron_retention	FALSE	canonical	2	75	junction_2	12588.7156965629	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGGGCCTCAATAAAGTT	20	True	NA	-51	True	NA	NA	NA	144792384	144789801	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr8_-_144789963_144790354_144790471_144790677_144790764_144791276_144791496_144791772_144791915_144791991_144792141_144792244
H1_mix_00085556	chr8	-	1590	5	NNC	ENSG00000196150.14	novel	6337	6	NA	NA	-10	3091	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	27.9329554469268	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATTTTGTTTCCTTTTA	11	True	NA	-4	True	ATTAAA	-16	NA	144901436	144886595	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr8_-_144887811_144889580_144889695_144889932_144890060_144890307_144890404_144901398
H1_mix_00085559	chr8	+	208	1	Intergenic	novelGene_1416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTCCAGGGGCTCTGGG	NA	False	NA	NA	False	NA	NA	NA	3241325	3241533	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_3241300_3241500
H1_mix_00085560	chr8	+	217	1	Intergenic	novelGene_1418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTCGAACAAGAGAAAGATGA	NA	False	NA	NA	False	AAGAAA	-1	NA	7147475	7147692	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_7147500_7147700
H1_mix_00085561	chr8	+	276	1	Intergenic	novelGene_1429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCTGTAAACATGTCTCG	NA	False	NA	NA	False	AGTAAA	-16	NA	8100209	8100485	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_8100200_8100500
H1_mix_00085562	chr8	+	1668	1	FSM	ENSG00000289357.1	ENST00000688186.1	957	1	37	-748	37	748	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCAGTTATCTCCAGCTT	14	False	NA	NA	False	AATGAA	-28	NA	25508815	25510483	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr8_+_25508800_25510500
H1_mix_00085563	chr8	+	281	1	Intergenic	novelGene_1455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGGCCCAGGTATTCCTA	NA	False	NA	NA	False	NA	NA	NA	26290882	26291163	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_26290900_26291200
H1_mix_00085564	chr8	+	2729	1	Intergenic	novelGene_1460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGCTGGTATTACAGGT	NA	False	NA	NA	False	NA	NA	NA	42529357	42532086	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_42529400_42532100
H1_mix_00085565	chr8	+	1413	1	Intergenic	novelGene_1463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTATTATTGACATCTTT	NA	False	NA	NA	False	NA	NA	NA	54205763	54207176	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_54205800_54207200
H1_mix_00085566	chr8	+	1262	1	Intergenic	novelGene_1465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	342	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGGGGACTTTTTCCTA	NA	False	NA	NA	False	NA	NA	NA	54222890	54224152	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_54222900_54224200
H1_mix_00085567	chr8	+	255	1	Intergenic	novelGene_1470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTACACGTGCCGGAAA	NA	False	NA	NA	False	NA	NA	NA	68975180	68975435	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_68975200_68975400
H1_mix_00085569	chr8	+	239	1	Intergenic	novelGene_1475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCAGTATTTAAGAAGTTA	NA	False	NA	NA	False	NA	NA	NA	72229646	72229885	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_72229600_72229900
H1_mix_00085570	chr8	+	289	1	Intergenic	novelGene_1479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80201577	80201866	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_80201600_80201900
H1_mix_00085571	chr8	+	201	1	Intergenic	novelGene_1484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAACCCGGGAGGCGGAGC	NA	False	NA	NA	False	NA	NA	NA	89358776	89358977	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr8_+_89358800_89359000
H1_mix_00085580	chr9	+	7708	48	FSM	ENSG00000107099.18	ENST00000432829.7	7448	48	-117	-143	-106	139	multi-exon	FALSE	canonical	3	14	junction_21	4.47911505843002	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTAACCCTGCTAGTA	17	True	NA	NA	False	NA	NA	NA	214747	465398	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_215030_271626_271730_286460_286637_289509_289582_304580_304705_311953_312167_317042_317129_325670_325738_328021_328172_332397_332479_334224_334385_336581_336719_339005_339100_340158_340322_368017_368136_370229_370301_371427_371567_372184_372287_376209_376306_376976_377212_379770_379936_382512_382686_386330_386427_390470_390567_396784_396935_399145_399260_404917_405074_406929_407070_414781_414952_418067_418208_420400_420584_420948_421079_422047_422136_426884_426982_428361_428497_429701_429855_432165_432325_433874_433976_434782_434976_439244_439389_441285_441418_441874_442010_443426_443517_446369_446607_449783_449928_452010_452118_463516_463688_464158
H1_mix_00085582	chr9	+	697	1	FSM	ENSG00000235330.2	ENST00000598100.1	674	1	-90	67	-90	7	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACGAAGGAAAAAATTTCAA	7315	False	NA	NA	False	AGTAAA	-20	NA	477659	478356	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_477700_478400
H1_mix_00085583	chr9	+	5625	14	FSM	ENSG00000107104.21	ENST00000674102.1	5348	14	-277	0	199	0	multi-exon	FALSE	canonical	3	10	junction_1	81.5726343485131	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTCCCTGTTTCAT	NA	False	NA	15	True	AATAAA	-16	NA	504417	746103	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_504755_539515_539634_540507_540668_676889_677010_710803_713465_730050_730249_731157_731267_732377_732618_734747_734836_738284_738505_740791_740935_742204_742406_744490_744590_745172
H1_mix_00085584	chr9	+	5829	11	ISM	ENSG00000107104.21	ENST00000382297.7	5070	12	-180	4	-165	0	intron_retention	FALSE	canonical	3	137	junction_1	28.2021275793157	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTTCCTTGTCCCTGTT	41	False	NA	11	True	AATAAA	-12	NA	504514	746099	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_504755_676889_677010_710803_713465_730050_730249_731157_731267_732377_732618_734747_734836_738284_738505_740791_740935_742204_742406_744490
H1_mix_00085585	chr9	+	5070	12	FSM	ENSG00000107104.21	ENST00000382297.7	5070	12	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	28.0035416886407	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTCCCTGTTTCAT	-13	True	NA	15	True	AATAAA	-16	NA	504694	746103	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_504755_676889_677010_710803_713465_730050_730249_731157_731267_732377_732618_734747_734836_738284_738505_740791_740935_742204_742406_744490_744590_745172
H1_mix_00085586	chr9	+	7200	11	FSM	ENSG00000107104.21	ENST00000489369.5	7193	11	-7	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	29.2273844194105	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTCCCTGTTTCAT	-13	True	NA	15	True	AATAAA	-16	NA	504694	746103	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_504755_676889_677010_710803_713465_730050_730249_731157_731267_732377_734836_738284_738505_740791_740935_742204_742406_744490_744590_745172
H1_mix_00085587	chr9	+	2266	5	FSM	ENSG00000107104.21	ENST00000688321.1	2889	5	637	-14	585	0	multi-exon	FALSE	canonical	3	216	junction_3	11.0538454847171	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGTCCCTGTTTCATC	NA	False	NA	16	True	AATAAA	-17	NA	734747	746104	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_734836_738284_738505_740791_740935_742204_742406_744490
H1_mix_00085588	chr9	+	2263	4	FSM	ENSG00000173253.16	ENST00000358146.7	2428	4	79	86	79	-81	multi-exon	FALSE	canonical	2	3	junction_1	0.942809041582063	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCAATGTGCAAATTGTT	2	True	NA	NA	False	TTTAAA	-16	NA	1050435	1057466	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_1050776_1051569_1052139_1053721_1053825_1056215
H1_mix_00085589	chr9	+	5855	33	FSM	ENSG00000080503.24	ENST00000357248.8	5855	33	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	15.4919018663784	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGCAGCCTCTTTCTTT	NA	False	NA	8	True	AATAAA	-18	NA	2015185	2193620	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_2015405_2028986_2029248_2032951_2033082_2039465_2039901_2047228_2047485_2054596_2054724_2056671_2056846_2058290_2058465_2060815_2060987_2070417_2070472_2073211_2073343_2073565_2073624_2076228_2076330_2077628_2077777_2081831_2081996_2083346_2083414_2084085_2084197_2086828_2087072_2088499_2088614_2096656_2096765_2097384_2097472_2101569_2101617_2104002_2104170_2110253_2110418_2115821_2116050_2119457_2119536_2123718_2123938_2161685_2161904_2181570_2181677_2182140_2182243_2186095_2186229_2191265_2191409_2192703
H1_mix_00085590	chr9	+	5679	5	FSM	ENSG00000080503.24	ENST00000637103.1	5657	5	0	-22	0	22	multi-exon	FALSE	canonical	3	5	junction_4	17.5979402203781	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATGTAGACTATTATTTT	-1	True	NA	58	True	ATTAAA	-10	NA	2015280	2046059	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_2015405_2028986_2029248_2032951_2033082_2039465_2039901_2041330
H1_mix_00085591	chr9	+	5748	34	FSM	ENSG00000080503.24	ENST00000349721.8	5748	34	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_29	16.5476189060558	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGCAGCCTCTTTCTTT	-6	True	NA	8	True	AATAAA	-18	NA	2015346	2193620	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_2015405_2028986_2029248_2032951_2033082_2039465_2039901_2047228_2047485_2054596_2054724_2056671_2056846_2058290_2058465_2060815_2060987_2070417_2070472_2073211_2073343_2073565_2073624_2076228_2076330_2077628_2077777_2081831_2081996_2083346_2083414_2084085_2084197_2086828_2087072_2088499_2088614_2096656_2096765_2097384_2097472_2101569_2101617_2104002_2104170_2110253_2110418_2115821_2116050_2119457_2119536_2123718_2123938_2161685_2161904_2170418_2170473_2181570_2181677_2182140_2182243_2186095_2186229_2191265_2191409_2192703
H1_mix_00085592	chr9	+	736	4	FSM	ENSG00000080503.24	ENST00000457226.2	736	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	17.7200451466693	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGCCAGCCCCTCCCCGA	-17	True	NA	NA	False	TATAAA	-10	NA	2017086	2039689	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_2017208_2028986_2029248_2032951_2033082_2039465
H1_mix_00085594	chr9	+	1717	7	ISM	ENSG00000080503.24	ENST00000302401.8	2242	8	1352	8	29	-4	3prime_fragment	FALSE	canonical	2	6	junction_1	28.5345794120436	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACAAATGCAGCCTCTTT	-5	True	NA	4	True	AATAAA	-14	NA	2159807	2193616	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_2159910_2161685_2161904_2181570_2181677_2182140_2182243_2186095_2186229_2191265_2191409_2192703
H1_mix_00085595	chr9	+	1486	2	Intergenic	novelGene_1516	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGAAATTGAACTCACAAA	4999	False	NA	76	True	TTTAAA	-4	NA	2276034	2288974	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_2276254_2287707
H1_mix_00085596	chr9	+	9213	19	FSM	ENSG00000147852.17	ENST00000382100.8	9213	19	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_16	51.3190516448657	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGAGCCTTTCCTTTCTC	4	True	NA	NA	False	AATAAA	-19	NA	2621786	2660056	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_2622272_2635452_2635573_2639858_2639982_2641376_2641500_2643159_2643532_2643627_2643751_2643836_2643960_2644733_2644854_2644956_2645083_2645573_2645746_2646333_2646553_2647473_2647593_2648207_2648348_2648668_2648811_2650369_2650517_2651414_2651499_2651873_2651955_2652779_2652950_2653832
H1_mix_00085597	chr9	+	5735	18	FSM	ENSG00000147852.17	ENST00000681306.1	5723	18	-12	0	0	0	multi-exon	FALSE	canonical	3	170	junction_12	20.4619657296774	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAGTTCTTGATGAATA	87	False	NA	NA	False	TTTAAA	-18	NA	2622040	2656916	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_2622272_2635452_2635573_2639858_2639982_2641376_2641500_2643159_2643532_2643627_2643751_2643836_2643960_2644733_2644854_2644956_2645083_2645573_2645746_2646333_2646553_2647473_2647593_2648207_2648348_2648668_2648811_2650369_2650517_2651873_2651955_2652779_2652950_2653832
H1_mix_00085601	chr9	+	3978	12	FSM	ENSG00000106688.12	ENST00000262352.8	3698	12	-283	3	-283	-3	multi-exon	FALSE	canonical	3	66	junction_9	8.55318799006478	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCCCTGCCTTTTTCTTC	NA	False	NA	6	True	AATAAA	-16	NA	4490184	4587466	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_4490771_4544566_4544708_4561448_4561542_4564343_4564459_4566046_4566090_4567668_4567768_4572203_4572389_4573906_4574015_4576000_4576124_4576568_4576764_4583037_4583173_4585311
H1_mix_00085602	chr9	+	2965	1	FSM	ENSG00000205808.7	ENST00000381883.5	2965	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGTGAGATGAAAACTTG	-20	True	NA	14	True	AATAAA	-20	NA	4662293	4665258	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_4662300_4665300
H1_mix_00085603	chr9	+	3523	7	FSM	ENSG00000106993.12	ENST00000381854.4	3500	7	-23	0	-13	0	multi-exon	FALSE	canonical	3	201	junction_5	20.5216687647201	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGTCCATTTATTCTCT	NA	False	NA	14	True	AATAAA	-18	NA	4679545	4708399	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_4679900_4684876_4685159_4688512_4688607_4697095_4697212_4697756_4697880_4701863_4702029_4706010
H1_mix_00085604	chr9	+	1033	3	FSM	ENSG00000120158.12	ENST00000381732.3	804	3	-79	-150	-47	150	multi-exon	FALSE	canonical	3	100	junction_2	5.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGAGAAGAGTTTGCAGA	5	True	NA	NA	False	CATAAA	-17	NA	4792896	4827487	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_4793228_4823547_4823620_4826857
H1_mix_00085605	chr9	+	2061	9	FSM	ENSG00000120158.12	ENST00000381750.9	2061	9	0	0	0	0	multi-exon	TRUE	canonical	3	90	junction_3	11.3185412045899	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAAGTGTAATAAGTGTAA	9	True	NA	20	True	ATTAAA	-17	NA	4792943	4861066	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_4793228_4823547_4823620_4826857_4827034_4833153_4833229_4834140_4834266_4841231_4841358_4844524_4844682_4849446_4849551_4860124
H1_mix_00085606	chr9	+	7449	25	FSM	ENSG00000096968.14	ENST00000381652.4	7023	25	-426	0	-187	0	multi-exon	FALSE	canonical	3	10	junction_4	5.16649865318219	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTCAGTTGTGTTTAT	6	True	NA	NA	False	AATAAA	-21	NA	4984845	5129948	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_4985631_4985939_4986023_5021962_5022214_5029782_5029907_5044402_5044521_5050685_5050832_5054562_5054885_5055668_5055789_5064882_5065041_5066677_5066790_5069021_5069209_5069924_5070053_5072491_5072627_5073697_5073786_5077452_5077581_5078305_5078445_5080228_5080381_5080532_5080684_5081724_5081862_5089673_5089864_5090445_5090571_5090738_5090912_5123003_5123122_5126332_5126447_5126683
H1_mix_00085607	chr9	+	4141	22	FSM	ENSG00000107036.12	ENST00000251879.10	4127	22	-14	0	-14	0	multi-exon	FALSE	canonical	3	42	junction_3	8.97388501402252	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGGTGAAATAAAAATTTAA	233	False	NA	NA	False	NA	NA	NA	5629010	5769674	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_5629454_5656582_5656691_5689958_5690039_5713895_5714004_5720181_5720325_5720613_5720751_5732387_5732480_5738449_5738539_5742868_5743014_5743688_5743738_5745930_5746084_5747301_5747506_5753199_5753239_5753535_5753647_5754840_5754931_5756211_5756373_5757312_5757452_5762540_5762661_5763139_5763869_5765413_5765573_5765661_5765799_5768969
H1_mix_00085608	chr9	+	6889	26	FSM	ENSG00000107036.12	ENST00000414202.7	6786	26	-108	5	-26	0	multi-exon	TRUE	canonical	3	42	junction_3	9.05944810681092	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACTTTGGTTTATTCAT	221	False	NA	8	True	AATAAA	-9	NA	5628998	5776552	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_5629454_5656582_5656691_5689958_5690039_5713895_5714004_5720181_5720325_5720613_5720751_5732387_5732480_5738449_5738539_5742868_5743014_5743688_5743738_5745930_5746084_5747301_5747506_5753199_5753239_5753535_5753647_5754840_5754931_5756211_5756373_5757312_5757452_5762540_5762661_5763139_5763869_5765413_5765573_5765661_5765799_5768969_5769257_5770086_5770279_5772563_5772742_5772891_5773081_5773957
H1_mix_00085609	chr9	+	443	1	FSM	ENSG00000233846.2	ENST00000456723.1	487	1	136	-92	136	92	mono-exon	FALSE	NA	NA	NA	NA	NA	825	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCAAGCTGTTAGTACAG	NA	False	NA	NA	False	NA	NA	NA	6278802	6279245	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_6278800_6279200
H1_mix_00085610	chr9	+	3576	16	FSM	ENSG00000147854.17	ENST00000276893.10	3576	16	0	0	0	0	multi-exon	TRUE	canonical	3	51	junction_4	15.1017291136552	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCATTTTGCTTTACTT	-4	True	NA	33	True	AATAAA	-20	NA	6413198	6507054	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_6413644_6420911_6421143_6433913_6434174_6460572_6460792_6475390_6475501_6477621_6477809_6481642_6481767_6481991_6482100_6486820_6486926_6493825_6493933_6497197_6497361_6498017_6498159_6499834_6499932_6500551_6500710_6504592_6504692_6506032
H1_mix_00085611	chr9	+	3066	14	NIC	ENSG00000147854.17	novel	3576	16	NA	NA	19	0	intron_retention	FALSE	canonical	0	0	junction_1	27.4517327893176	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCATTTTGCTTTACTT	-9	True	NA	33	True	AATAAA	-20	NA	6413217	6507054	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_6413644_6460572_6460792_6475390_6475501_6477621_6477809_6481642_6481767_6481991_6482100_6486820_6486926_6493825_6493933_6497197_6497361_6498017_6498159_6499834_6499932_6500551_6500710_6504592_6504692_6506032
H1_mix_00085612	chr9	+	802	3	FSM	ENSG00000147854.17	ENST00000381373.3	802	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	34.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGAATGGCAGTTTTGCTTT	95	False	NA	NA	False	AATAAA	-15	NA	6413417	6422979	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_6413644_6420911_6421143_6422634
H1_mix_00085614	chr9	+	2859	4	FSM	ENSG00000147854.17	ENST00000492853.1	2859	4	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	2.82842712474619	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCATTTTGCTTTACTT	5496	False	NA	33	True	AATAAA	-20	NA	6498351	6507054	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_6499932_6500551_6500710_6504592_6504692_6506032
H1_mix_00085616	chr9	+	315	1	FSM	ENSG00000264530.2	ENST00000583862.2	260	1	-83	28	-83	-28	mono-exon	FALSE	NA	NA	NA	NA	NA	252	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCTGGGCCCAAGCAATC	NA	False	NA	NA	False	NA	NA	NA	6542010	6542325	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_6542000_6542300
H1_mix_00085617	chr9	+	624	3	FSM	ENSG00000236924.2	ENST00000413145.2	906	3	37	245	16	-245	multi-exon	FALSE	canonical	3	25	junction_2	2.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTCTGTTTTGAAAC	5	True	NA	7	True	AATAAA	-16	NA	6645857	6670635	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_6646086_6669543_6669729_6670424
H1_mix_00085619	chr9	+	4987	22	FSM	ENSG00000107077.19	ENST00000381309.8	4338	22	-649	0	-317	0	multi-exon	FALSE	canonical	3	56	junction_1	13.7147817370616	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTCTCTGACTTGCTT	130	False	NA	5	True	AATAAA	-18	NA	6757323	7175648	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_6758204_6792971_6793133_6805598_6805775_6814630_6814746_6849506_6849701_6880011_6880062_6887959_6888064_6893094_6893233_6980924_6981119_6984165_6984405_6986343_6986667_6990415_6990525_7011697_7011880_7013787_7014002_7015852_7015930_7046861_7046918_7049091_7049201_7103684_7103871_7128065_7128237_7165237_7165358_7169797_7169891_7174552
H1_mix_00085620	chr9	+	4303	23	NIC	ENSG00000107077.19	novel	4338	22	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	12	junction_19	24.6973415104936	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTCCTGTCTCTGACTT	40	False	NA	1	True	AATAAA	-14	NA	6758102	7175644	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_6758204_6792971_6793133_6805598_6805775_6814630_6814746_6849506_6849701_6880011_6880062_6887959_6888064_6893094_6893233_6980924_6981119_6984165_6984405_6986343_6986667_6990415_6990525_7011697_7011880_7013787_7014002_7015852_7015930_7046861_7046918_7049091_7049201_7103684_7103871_7105401_7105501_7128065_7128237_7165237_7165358_7169797_7169891_7174552
H1_mix_00085621	chr9	+	5461	18	FSM	ENSG00000107077.19	ENST00000543771.5	3332	18	-1311	-818	-809	818	multi-exon	FALSE	canonical	2	2	junction_17	24.4558779314488	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCCCATTTATTTATTTA	NA	False	NA	NA	False	ATTAAA	-19	NA	6756831	7078081	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_6758204_6792971_6793133_6805598_6805775_6814630_6814746_6849506_6849701_6880011_6880062_6887959_6888064_6893094_6893233_6980924_6981119_6984165_6984405_6986343_6986667_6990415_6990525_7011697_7011880_7013787_7014002_7015852_7015930_7046861_7046918_7049091_7049201_7076433
H1_mix_00085623	chr9	+	457	1	FSM	ENSG00000212829.8	ENST00000470205.2	348	1	-25	-84	-25	84	mono-exon	FALSE	NA	NA	NA	NA	NA	1946	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATAGCTGCGTATTTTTC	4930	False	NA	NA	False	AATAAA	-33	NA	9090872	9091329	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_9090900_9091300
H1_mix_00085624	chr9	+	236	1	FSM	ENSG00000265735.2	ENST00000581458.2	321	1	-1	86	-1	-86	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTGTAATGCTACTGGT	NA	False	NA	NA	False	NA	NA	NA	9442058	9442294	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_9442100_9442300
H1_mix_00085626	chr9	+	1199	1	FSM	ENSG00000234297.2	ENST00000422292.2	996	1	352	-555	352	555	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAATAAAATGAAATAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	15055408	15056607	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_15055400_15056600
H1_mix_00085627	chr9	+	2546	10	FSM	ENSG00000164975.16	ENST00000490969.5	2524	10	-22	0	-22	0	multi-exon	TRUE	canonical	3	159	junction_9	60.0255089807247	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTTTCTCTTTTTTCGA	-18	True	NA	7	True	TATAAA	-16	NA	15422846	15462460	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_15423194_15423908_15423987_15433551_15433637_15444601_15444707_15447094_15447245_15451319_15451403_15453040_15453206_15457959_15458068_15459718_15460314_15461630
H1_mix_00085628	chr9	+	5537	9	FSM	ENSG00000164975.16	ENST00000380821.8	3000	9	-29	-2508	-22	1674	multi-exon	FALSE	canonical	3	321	junction_4	17.5209695793355	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAAGTTAAAACTGTATA	-18	True	NA	NA	False	AATAAA	-4	NA	15422846	15464134	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_15423194_15423908_15423987_15433551_15433637_15444601_15444707_15447094_15447245_15451319_15451403_15453040_15453206_15457959_15458068_15459718
H1_mix_00085629	chr9	+	3618	10	NNC	ENSG00000164975.16	novel	2524	10	NA	NA	2	-89	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_9	104.589615422952	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGTTATACAGGTATCCC	16	True	NA	-82	True	NA	NA	NA	15422880	15462371	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_15423194_15423908_15423987_15433551_15433637_15444601_15444707_15447094_15447245_15451319_15451403_15453040_15453206_15457959_15458068_15459718_15460314_15460435
H1_mix_00085630	chr9	+	6531	26	FSM	ENSG00000164989.17	ENST00000380701.8	6553	26	0	22	0	-22	multi-exon	FALSE	canonical	0	0	junction_12	4.28504375706947	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGTGTATGTGTCTCCA	13	True	NA	NA	False	NA	NA	NA	15553042	15974015	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_15553303_15563977_15564130_15571623_15571760_15578848_15579024_15591365_15591557_15594040_15594173_15623266_15623414_15657126_15657220_15666162_15666324_15678757_15678897_15695234_15695338_15721768_15721876_15723680_15723747_15724775_15724977_15727868_15728037_15729609_15729799_15744272_15744778_15745514_15745632_15777599_15777827_15778967_15779151_15784508_15784695_15846701_15846848_15848892_15848948_15874531_15874664_15920269_15920423_15971608
H1_mix_00085631	chr9	+	2296	3	FSM	ENSG00000044459.15	ENST00000484374.1	2272	3	-12	-12	-12	12	multi-exon	FALSE	canonical	2	4	junction_2	42.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTCTGTATGTGATCTTC	NA	False	NA	NA	False	AATAAA	-20	NA	17134969	17168568	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_17135426_17143287_17143377_17166817
H1_mix_00085632	chr9	+	4941	7	FSM	ENSG00000044459.15	ENST00000380641.4	4871	7	-70	0	-12	0	multi-exon	FALSE	canonical	0	0	junction_6	27.9090785707208	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTATTCATTATAGTGTA	NA	False	NA	23	True	AATAAA	-35	NA	17134969	17302051	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_17135426_17143287_17143377_17226202_17226288_17235657_17235793_17236408_17236589_17273732_17273867_17298189
H1_mix_00085633	chr9	+	5765	26	FSM	ENSG00000044459.15	ENST00000380647.8	5518	26	-246	-1	-188	1	multi-exon	FALSE	canonical	0	0	junction_6	18.1652855744136	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCTCATTCATTTCTTT	NA	False	NA	10	True	AATAAA	-18	NA	17134793	17503924	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_17135426_17143287_17143377_17226202_17226288_17235657_17235793_17236408_17236589_17273732_17273867_17298189_17298353_17309057_17309253_17330631_17330809_17332604_17332731_17340826_17340949_17342324_17342445_17366616_17366718_17388161_17388254_17394533_17395070_17409292_17409474_17415787_17415882_17415965_17416190_17457523_17457716_17462915_17463014_17464496_17464624_17465980_17466119_17466705_17466892_17484294_17484481_17486988_17487067_17502550
H1_mix_00085634	chr9	+	5508	26	NNC	ENSG00000044459.15	novel	5518	26	NA	NA	7	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	17.7763888346312	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGCTCATTCATTTCTT	5	True	NA	9	True	AATAAA	-17	NA	17135046	17503923	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_17135426_17143287_17143377_17226202_17226288_17235657_17235793_17236408_17236589_17273732_17273867_17298189_17298353_17309057_17309253_17330631_17330809_17332604_17332731_17340826_17340949_17342324_17342445_17366616_17366718_17388161_17388254_17394533_17395070_17409295_17409474_17415787_17415882_17415965_17416190_17457523_17457716_17462915_17463014_17464496_17464624_17465980_17466119_17466705_17466892_17484294_17484481_17486988_17487067_17502550
H1_mix_00085635	chr9	+	2400	5	ISM	ENSG00000044459.15	ENST00000380641.4	4871	7	121	63817	121	-63817	5prime_fragment	FALSE	canonical	3	61	junction_3	10.5682306939241	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGAATTTTGGTAGTC	119	False	NA	NA	False	AATAAA	-20	NA	17135160	17238234	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_17135426_17143287_17143377_17226202_17226288_17235657_17235793_17236408
H1_mix_00085636	chr9	+	2617	9	FSM	ENSG00000107295.10	ENST00000380607.5	2617	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	2.9474565306379	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAGGCTCTGCTCCTTCA	-2	True	NA	28	True	AATAAA	-18	NA	17579065	17797124	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_17579288_17747065_17747135_17761436_17761510_17786380_17786525_17787379_17787514_17789391_17789551_17791230_17791335_17793366_17793498_17795543
H1_mix_00085637	chr9	+	1599	1	FSM	ENSG00000155876.6	ENST00000380527.3	1599	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTCCTTATTTGAAATAA	3	True	NA	15	True	AATAAA	-19	NA	19049426	19051025	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_19049400_19051000
H1_mix_00085638	chr9	+	6831	32	FSM	ENSG00000137145.21	ENST00000602925.5	6831	32	0	0	0	0	multi-exon	FALSE	canonical	2	32	junction_12	14.4834039726425	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	19230434	19372858	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_19230834_19276157_19276480_19286768_19287022_19288595_19288666_19290703_19290877_19296007_19296247_19298055_19298123_19299228_19299288_19300186_19300332_19305351_19305528_19316416_19316518_19316620_19316840_19324361_19324508_19325938_19325975_19326063_19326195_19328029_19328163_19331977_19332185_19334976_19335106_19336269_19336415_19340991_19341115_19342632_19342780_19345920_19347087_19350701_19350880_19352072_19352183_19352489_19352666_19356971_19357155_19357964_19358161_19360243_19360490_19361845_19361964_19369836_19369988_19371755_19371821_19372036
H1_mix_00085639	chr9	+	8143	33	FSM	ENSG00000137145.21	ENST00000434457.7	8143	33	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_19	17.1732611474204	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTAGTCTGCTGCTGCCAT	-3	True	NA	NA	False	ATTAAA	-31	NA	19230692	19374281	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_19230834_19276157_19276480_19286768_19287022_19288595_19288666_19290703_19290877_19296007_19296247_19298055_19298123_19299228_19299288_19300186_19300332_19305351_19305528_19316416_19316518_19316620_19316840_19324361_19324508_19325938_19325975_19326063_19326195_19328029_19328163_19331977_19332185_19334976_19335106_19336269_19336415_19336685_19336833_19340991_19341115_19342632_19342780_19345920_19347087_19350701_19350880_19352072_19352183_19352489_19352666_19356971_19357155_19357964_19358161_19360243_19360490_19361845_19361964_19369836_19369988_19371755_19371821_19372036
H1_mix_00085641	chr9	+	1554	1	FSM	ENSG00000273226.1	ENST00000609982.1	546	1	-616	-392	-616	392	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTAAACAAAACAAAACAGCA	NA	False	NA	NA	False	NA	NA	NA	19374834	19376388	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_19374800_19376400
H1_mix_00085642	chr9	+	2144	1	FSM	ENSG00000260912.1	ENST00000563205.1	1965	1	-179	0	-179	0	mono-exon	FALSE	NA	NA	NA	NA	NA	256	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGTTCCTTGTTGGTTT	NA	False	NA	9	True	ATTAAA	-15	NA	19453029	19455173	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_19453000_19455200
H1_mix_00085643	chr9	+	6271	44	NIC	ENSG00000188352.13	novel	6096	46	NA	NA	4	0	intron_retention	FALSE	canonical	2	58	junction_1	34.8883407793549	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGTGCGTGTGACTTT	NA	False	NA	11	True	AGTAAA	-12	NA	20658312	20995948	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_20658827_20715321_20715411_20717793_20717869_20720379_20720535_20740235_20740341_20758089_20758192_20764868_20765074_20770031_20770239_20778680_20778769_20781726_20781930_20789350_20789609_20819795_20819901_20820323_20820426_20820940_20821072_20822988_20823116_20862577_20862713_20865925_20865977_20866928_20867013_20874680_20874808_20881870_20882057_20885108_20885231_20907149_20907243_20912865_20912955_20916892_20916938_20923659_20923769_20926300_20926418_20929357_20929597_20933013_20933104_20944626_20944775_20946700_20946821_20948270_20948394_20948850_20948929_20949603_20949676_20950995_20951099_20952984_20953066_20976419_20976549_20978338_20978455_20981425_20981687_20982356_20982447_20986287_20986466_20988331_20988430_20990122_20990375_20993252_20993329_20995555
H1_mix_00085644	chr9	+	5939	44	NIC	ENSG00000188352.13	novel	6096	46	NA	NA	-26	-2	combination_of_known_splicesites	TRUE	canonical	2	23	junction_1	38.0020636483858	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCGTGTGACTTTTGTTT	NA	False	NA	16	True	AGTAAA	-17	NA	20658282	20995953	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_20658460_20715321_20715411_20717793_20717869_20720379_20720535_20740235_20740341_20758089_20758192_20764868_20765074_20770031_20770239_20778680_20778769_20781726_20781930_20789350_20789609_20819795_20819901_20820323_20820426_20820940_20821072_20822988_20823116_20862577_20862713_20865925_20865977_20866928_20867013_20874680_20874808_20881870_20882057_20885108_20885231_20907149_20907243_20912865_20912955_20916892_20916938_20923659_20923769_20926300_20926418_20929357_20929597_20933013_20933104_20944626_20944775_20946700_20946821_20948270_20948394_20948850_20948929_20949603_20949676_20950995_20951099_20952984_20953066_20976419_20976549_20978338_20978455_20981425_20981687_20982356_20982447_20986287_20986466_20988331_20988430_20990122_20990375_20993252_20993329_20995555
H1_mix_00085645	chr9	+	552	3	NNC	ENSG00000188352.13	novel	6096	46	NA	NA	25	-96203	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	15	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCAAGTTGTAAAAGTTT	NA	False	NA	15	True	AATAAA	-26	NA	20658333	20673909	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_20658460_20658690_20658827_20673619
H1_mix_00085646	chr9	+	6024	45	NIC	ENSG00000188352.13	novel	6096	46	NA	NA	25	-2	combination_of_known_splicesites	FALSE	canonical	2	39	junction_1	40.4122033262968	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCGTGTGACTTTTGTTT	NA	False	NA	16	True	AGTAAA	-17	NA	20658333	20995953	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_20658460_20658690_20658827_20715321_20715411_20717793_20717869_20720379_20720535_20740235_20740341_20758089_20758192_20764868_20765074_20770031_20770239_20778680_20778769_20781726_20781930_20789350_20789609_20819795_20819901_20820323_20820426_20820940_20821072_20822988_20823116_20862577_20862713_20865925_20865977_20866928_20867013_20874680_20874808_20881870_20882057_20885108_20885231_20907149_20907243_20912865_20912955_20916892_20916938_20923659_20923769_20926300_20926418_20929357_20929597_20933013_20933104_20944626_20944775_20946700_20946821_20948270_20948394_20948850_20948929_20949603_20949676_20950995_20951099_20952984_20953066_20976419_20976549_20978338_20978455_20981425_20981687_20982356_20982447_20986287_20986466_20988331_20988430_20990122_20990375_20993252_20993329_20995555
H1_mix_00085647	chr9	+	5838	44	FSM	ENSG00000188352.13	ENST00000338382.11	5794	44	-46	2	-46	0	multi-exon	FALSE	canonical	2	74	junction_1	33.644886189207	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGTGCGTGTGACTTT	NA	False	NA	11	True	AGTAAA	-12	NA	20684212	20995948	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_20684294_20715321_20715411_20717793_20717869_20720379_20720535_20740235_20740341_20758089_20758192_20764868_20765074_20770031_20770239_20778680_20778769_20781726_20781930_20789350_20789609_20819795_20819901_20820323_20820426_20820940_20821072_20822988_20823116_20862577_20862713_20865925_20865977_20866928_20867013_20874680_20874808_20881870_20882057_20885108_20885231_20907149_20907243_20912865_20912955_20916892_20916938_20923659_20923769_20926300_20926418_20929357_20929597_20933013_20933104_20944626_20944775_20946700_20946821_20948270_20948394_20948850_20948929_20949603_20949676_20950995_20951099_20952984_20953066_20976419_20976549_20978338_20978455_20981425_20981687_20982356_20982447_20986287_20986466_20988331_20988430_20990122_20990375_20993252_20993329_20995555
H1_mix_00085648	chr9	+	694	1	FSM	ENSG00000188352.13	ENST00000604828.1	1973	1	1160	119	1160	-119	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTACCCAAGAAATGGTAGA	8084	False	NA	NA	False	NA	NA	NA	20875002	20875696	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_20875000_20875700
H1_mix_00085649	chr9	+	803	1	FSM	ENSG00000229835.2	ENST00000427983.2	1768	1	-659	1624	-659	-1624	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAACTTGGACCCATCCA	NA	False	NA	NA	False	NA	NA	NA	21694516	21695319	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_21694500_21695300
H1_mix_00085650	chr9	+	6752	8	FSM	ENSG00000099810.21	ENST00000644715.2	6032	8	-88	-632	-88	632	multi-exon	TRUE	canonical	3	348	junction_6	20.6150331514828	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGACGACAGCCTGAGTTG	NA	False	NA	21	True	AATAAA	-16	NA	21802547	21867713	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_21802782_21815432_21815520_21816713_21816773_21818034_21818203_21837907_21838011_21854630_21854871_21859302_21859426_21861975
H1_mix_00085651	chr9	+	6871	8	FSM	ENSG00000099810.21	ENST00000460874.6	1434	8	-37	-5400	-31	639	multi-exon	FALSE	canonical	3	30	junction_1	121.843827776982	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCTGAGTTGTTTATAT	NA	False	NA	28	True	AATAAA	-23	NA	21802604	21867720	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_21802951_21815432_21815520_21816713_21816773_21818034_21818203_21837907_21838011_21854630_21854871_21859302_21859426_21861975
H1_mix_00085652	chr9	+	7554	8	FSM	ENSG00000099810.21	ENST00000580900.5	7557	8	-13	16	0	-16	multi-exon	FALSE	canonical	3	13	junction_7	127.569428875705	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTATTTGCCTTTGAAAC	-17	True	NA	NA	False	ATTAAA	-4	NA	21802635	21937635	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_21802782_21815432_21815520_21816713_21816773_21818034_21818203_21837907_21838011_21854630_21854871_21859302_21859426_21931007
H1_mix_00085654	chr9	+	5607	2	FSM	ENSG00000176399.4	ENST00000325870.3	5586	2	-21	0	-21	0	multi-exon	FALSE	canonical	3	58	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGTTTATGCTACATT	14	False	NA	11	True	AATAAA	-14	NA	22446802	22455740	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_22447733_22451063
H1_mix_00085655	chr9	+	200	1	FSM	ENSG00000236739.3	ENST00000453177.2	535	1	80	255	80	-255	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAGTTTTCTAAACGTAA	NA	False	NA	NA	False	NA	NA	NA	22747779	22747979	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_22747800_22748000
H1_mix_00085656	chr9	+	207	1	Intergenic	novelGene_1541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCTGGGCAACAGCCACA	NA	False	NA	NA	False	ACTAAA	-19	NA	25290257	25290464	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_25290300_25290500
H1_mix_00085657	chr9	+	889	3	Intergenic	novelGene_1542	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	33	junction_2	2.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTGGGTGGTCTCTTC	NA	False	NA	20	True	AATAAA	-22	NA	25669147	25675181	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_25669478_25671277_25671471_25674815
H1_mix_00085658	chr9	+	2175	20	FSM	ENSG00000096872.17	ENST00000443698.5	2163	20	-12	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	43.6383398990071	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTACCATCTTCTTTT	13	False	NA	NA	False	AATAAA	-14	NA	26947299	27062925	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_26947464_26961948_26962088_26978127_26978264_26980570_26980620_26984256_26984356_26984498_26984560_26988668_26988729_26990133_26990196_27009019_27009159_27011905_27011969_27016906_27017051_27018646_27018688_27029024_27029105_27044741_27044796_27047273_27047372_27048147_27048275_27055608_27055773_27056333_27056460_27060590_27060652_27062617
H1_mix_00085659	chr9	+	5325	20	FSM	ENSG00000096872.17	ENST00000380062.10	5325	20	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_8	17.9591719173151	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGCTATTTGTAATTTA	-13	True	NA	NA	False	ATTAAA	-27	NA	26956411	27066134	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_26956517_26961948_26962088_26978127_26978264_26980570_26980620_26984256_26984356_26984498_26984560_26988668_26988729_26990133_26990196_27009019_27009159_27011905_27011969_27016906_27017051_27018646_27018688_27029024_27029105_27044741_27044796_27047273_27047372_27048147_27048275_27055608_27055773_27056333_27056460_27060590_27060652_27062617
H1_mix_00085661	chr9	+	4781	23	FSM	ENSG00000120156.22	ENST00000380036.10	4683	23	-98	0	-14	0	multi-exon	FALSE	canonical	3	35	junction_14	21.6367456039622	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGGAGTGTGTCTCATAG	NA	False	NA	23	True	AATAAA	-23	NA	27109126	27230174	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_27109643_27157830_27158143_27168494_27168606_27169476_27169630_27172615_27172748_27173221_27173363_27180239_27180369_27183458_27183611_27185484_27185630_27190528_27190691_27192488_27192624_27197314_27197600_27202819_27203120_27204910_27205066_27206581_27206793_27209120_27209232_27212706_27212898_27213483_27213598_27217687_27217759_27218776_27218818_27220048_27220146_27228205_27228306_27229157
H1_mix_00085662	chr9	+	5047	23	NIC	ENSG00000120156.22	novel	4683	23	NA	NA	0	367	combination_of_known_junctions	FALSE	canonical	3	50	junction_14	19.5628358234318	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCCCATCAAGCTACCATT	-1	True	NA	86	True	NA	NA	NA	27109224	27230541	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_27109643_27157830_27158143_27168494_27168606_27169476_27169630_27172615_27172748_27173221_27173363_27180239_27180369_27183458_27183611_27185484_27185630_27190528_27190691_27192488_27192624_27197314_27197600_27202819_27203120_27204910_27205063_27206581_27206793_27209120_27209232_27212706_27212898_27213483_27213598_27217687_27217759_27218776_27218818_27220048_27220146_27228205_27228306_27229157
H1_mix_00085663	chr9	+	3935	22	FSM	ENSG00000120156.22	ENST00000406359.8	3935	22	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	30.5294178043723	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTCTCAATTTTATCCC	0	True	NA	110	True	TATAAA	-9	NA	27109415	27229746	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_27109643_27157830_27158143_27168494_27168606_27169476_27169630_27172615_27172748_27173221_27173363_27183458_27183611_27185484_27185630_27190528_27190691_27192488_27192624_27197314_27197600_27202819_27203120_27204910_27205066_27206581_27206793_27209120_27209232_27212706_27212898_27213483_27213598_27217687_27217759_27218776_27218818_27220048_27220146_27228205_27228306_27229157
H1_mix_00085664	chr9	+	272	1	FSM	ENSG00000285103.2	ENST00000649931.1	1614	1	467	875	-367	-875	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGCCGAGCGGGGACCCC	379	False	NA	NA	False	GGGGCT	-15	NA	27529551	27529823	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_27529600_27529800
H1_mix_00085666	chr9	+	7466	21	FSM	ENSG00000122729.19	ENST00000309951.8	7443	21	-23	0	0	0	multi-exon	FALSE	canonical	3	572	junction_9	57.1742949235056	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAAGTTCTCCTTATTTA	-46	True	NA	NA	False	ATTAAA	-16	NA	32384619	32454769	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_32384736_32405484_32405604_32407260_32407430_32408513_32408652_32418127_32418198_32418327_32418512_32419037_32419178_32420855_32421028_32423318_32423420_32424548_32424666_32425837_32425998_32427300_32427437_32429418_32429504_32430417_32430575_32431718_32431844_32433727_32433833_32434558_32434702_32436249_32436398_32440464_32440588_32448895_32449082_32449997
H1_mix_00085668	chr9	+	1010	3	FSM	ENSG00000235453.12	ENST00000453396.5	1003	3	-7	0	-7	0	multi-exon	FALSE	canonical	1	1	junction_1	236	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGTTTATTTTTGCATT	NA	False	NA	17	True	AATAAA	-18	NA	32551136	32553007	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_32551694_32552233_32552480_32552800
H1_mix_00085669	chr9	+	843	1	FSM	ENSG00000235453.12	ENST00000644531.1	668	1	-148	-27	-130	27	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCACTAGTATGCAAATTT	483	False	NA	49	True	NA	NA	NA	32552196	32553039	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_32552200_32553000
H1_mix_00085676	chr9	+	3542	16	NNC	ENSG00000086102.19	novel	3513	16	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_11	45.9678148273333	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATGCATATTTATTGTA	-15	True	NA	4	True	AATAAA	-14	NA	33290514	33348722	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_33290598_33294419_33295428_33301262_33301422_33303190_33303269_33307193_33307300_33311105_33311178_33313653_33313794_33318730_33318831_33318909_33319128_33328580_33328679_33332471_33332503_33338506_33338590_33342745_33342855_33344068_33344189_33347037_33347118_33347665
H1_mix_00085677	chr9	+	3513	16	FSM	ENSG00000086102.19	ENST00000318524.6	3513	16	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_15	24.021841912911	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGCATATTTATTGTAC	15	True	NA	5	True	AATAAA	-15	NA	33290544	33348723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_33290598_33294419_33295428_33301262_33301422_33303190_33303269_33307193_33307300_33311105_33311178_33313653_33313794_33318730_33318831_33318909_33319128_33328580_33328679_33332471_33332503_33338509_33338590_33342745_33342855_33344068_33344189_33347037_33347118_33347662
H1_mix_00085678	chr9	+	4013	16	NNC	ENSG00000086102.19	novel	3513	16	NA	NA	-77	393	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_15	33.610448111	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGGCTTATTAAGACTTC	NA	False	NA	NA	False	AAAACA	-21	NA	33290434	33349116	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_33290598_33294419_33295428_33301262_33301422_33303190_33303269_33307193_33307300_33311105_33311178_33313653_33313794_33318730_33318831_33318909_33319128_33328580_33328679_33332471_33332503_33338509_33338590_33342745_33342855_33344068_33344189_33347037_33347118_33347665
H1_mix_00085681	chr9	+	1258	2	FSM	ENSG00000226562.4	ENST00000664899.1	1263	2	0	5	0	2	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAATCTCTGTGTGTGTG	NA	False	NA	NA	False	AATAAA	-20	NA	33602577	33605295	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_33603551_33605010
H1_mix_00085684	chr9	+	3528	1	FSM	ENSG00000260947.1	ENST00000566968.1	3528	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTCACTCCTTCTAT	NA	False	NA	2	True	AATAAA	-15	NA	33697458	33700986	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_33697500_33701000
H1_mix_00085686	chr9	+	2017	6	FSM	ENSG00000165006.14	ENST00000625521.2	2029	6	12	0	12	0	multi-exon	FALSE	canonical	3	75	junction_1	110.875425591066	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCCTGGCCTAGTTGCTG	NA	False	NA	88	True	NA	NA	NA	34179016	34251850	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_34179241_34234215_34234341_34241184_34242109_34249778_34249962_34250657_34250760_34251391
H1_mix_00085690	chr9	+	1779	11	FSM	ENSG00000213930.12	ENST00000378842.8	1756	11	-23	0	0	0	multi-exon	FALSE	canonical	3	166	junction_5	18.5658288260988	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGGTAGGGAGTGTGTAGG	12	True	NA	NA	False	GGGGCT	-7	NA	34646651	34651035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_34646787_34647088_34647259_34647491_34647568_34647656_34647706_34647831_34647962_34648114_34648172_34648333_34648457_34648761_34648895_34648997_34649082_34649409_34649565_34650368
H1_mix_00085692	chr9	+	1729	8	FSM	ENSG00000213930.12	ENST00000554638.5	1712	8	-17	0	0	0	multi-exon	FALSE	canonical	3	166	junction_2	20.3389643145307	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCATTAATAAAACTGTGC	-10	True	NA	-13	True	NA	NA	NA	34646663	34650549	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_34646787_34647088_34647962_34648114_34648172_34648333_34648457_34648761_34648895_34648997_34649082_34649409_34649565_34650368
H1_mix_00085694	chr9	+	1736	13	FSM	ENSG00000137070.19	ENST00000318041.13	1728	13	-8	0	-8	0	multi-exon	FALSE	canonical	3	4	junction_1	8.86002257333467	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTCAGAAATTATTATCCA	6	True	NA	19	True	AATAAA	-27	NA	34653926	34661892	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_34654000_34655217_34655318_34655604_34655666_34656738_34656909_34657034_34657150_34657302_34657336_34657420_34657588_34658519_34658684_34659758_34659901_34660273_34660394_34660503_34660601_34660853_34660937_34661481
H1_mix_00085696	chr9	+	5718	8	FSM	ENSG00000122733.12	ENST00000242315.3	5718	8	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_3	1.55182578445717	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCGGCTTCCTGTTTCTTG	35	False	NA	NA	False	AATAAA	-16	NA	34958323	34982544	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_34958402_34971294_34971677_34972345_34972532_34976151_34976231_34976534_34976741_34977082_34977244_34977545_34977642_34978014
H1_mix_00085698	chr9	+	851	4	FSM	ENSG00000137094.16	ENST00000537321.5	851	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	94.0460879923597	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAGGACAAGATCCTGCACA	25	True	NA	NA	False	NA	NA	NA	34989744	34996670	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_34989832_34990498_34990612_34993199_34993445_34996264
H1_mix_00085699	chr9	+	2825	4	FSM	ENSG00000137094.16	ENST00000454002.6	2818	4	-7	0	-7	0	multi-exon	FALSE	canonical	3	20	junction_1	83.4918492362511	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGAGCAGGAGCAACAAAC	523	False	NA	25	True	AATAAA	-20	NA	34990242	34998433	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_34990813_34993199_34993445_34996264_34996867_34997025
H1_mix_00085702	chr9	+	6300	39	NNC	ENSG00000198722.15	novel	6303	39	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_23	35.7547916320839	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGGTTTGGTAATTCTG	42	False	NA	21	True	AATAAA	-17	NA	35162061	35405338	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_35162306_35228014_35228045_35231119_35231220_35236468_35236587_35237702_35237827_35243290_35243365_35258992_35259051_35295695_35295931_35310466_35310782_35313898_35313990_35366946_35366994_35370317_35370397_35375126_35375202_35376027_35376248_35377467_35377696_35378294_35378437_35380469_35380640_35381099_35381216_35381555_35381720_35382356_35382508_35384245_35384315_35385723_35385814_35386164_35386294_35389848_35389974_35390628_35390715_35396475_35396603_35396840_35396938_35397166_35397311_35397634_35397713_35398210_35398289_35398553_35398643_35398881_35399035_35399160_35399285_35399391_35399449_35399648_35399730_35400295_35400444_35403166_35403260_35403439_35403600_35403747
H1_mix_00085705	chr9	+	2546	10	FSM	ENSG00000107140.16	ENST00000336395.6	2530	10	-16	0	-16	0	multi-exon	FALSE	canonical	3	39	junction_4	5.2704627669473	232	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGCTCAGCCCGTGCGCCC	-9	True	NA	55	True	AATAAA	-30	NA	35605245	35610033	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_35605839_35605983_35606106_35606236_35606286_35606836_35606984_35607326_35607410_35607581_35607673_35607927_35608012_35608159_35608250_35608394_35608510_35608861
H1_mix_00085709	chr9	+	1186	6	FSM	ENSG00000159884.12	ENST00000378409.7	1173	6	-13	0	-13	0	multi-exon	FALSE	canonical	3	65	junction_5	46.4990322479942	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAACATAAAAATAGCCACA	-44	True	NA	NA	False	AATAAA	-16	NA	35658276	35661499	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_35658486_35658575_35658728_35660400_35660462_35660556_35660648_35660745_35660859_35660939
H1_mix_00085710	chr9	+	1027	4	FSM	ENSG00000159884.12	ENST00000378406.5	1016	4	-12	1	-2	0	multi-exon	FALSE	canonical	3	167	junction_2	11.6714276000077	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGAGTGCTCCTGTGTGTT	-19	True	NA	14	True	ACTAAA	-19	NA	35658301	35661186	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_35658486_35658575_35658728_35660400_35660462_35660556
H1_mix_00085712	chr9	+	1496	9	FSM	ENSG00000107175.12	ENST00000353704.3	1496	9	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_5	25.1044692236263	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCCTAGGTCACCCTCA	0	True	NA	4	True	AATAAA	-14	NA	35732665	35736999	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_35732902_35732995_35733144_35733214_35733283_35733395_35733486_35735108_35735216_35735305_35735375_35736047_35736133_35736226_35736312_35736391
H1_mix_00085715	chr9	+	1534	2	FSM	ENSG00000227388.3	ENST00000658963.1	1534	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATATCGTGCCTAAGG	NA	False	NA	-14	True	NA	NA	NA	35785493	35790407	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_35786776_35790155
H1_mix_00085718	chr9	+	246	1	FSM	ENSG00000196196.3	ENST00000354323.3	935	1	451	238	451	-238	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGTGACAGTGACTCCC	412	False	NA	NA	False	GGGGCT	-10	NA	35906652	35906898	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_35906700_35906900
H1_mix_00085720	chr9	+	1738	9	NNC	ENSG00000122707.12	novel	1717	9	NA	NA	0	112	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_8	70.2424373153438	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGTGGGTTCTTGGTCTC	3	True	NA	NA	False	AATGAA	-25	NA	36036939	36086307	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_36037099_36052264_36052324_36058826_36058902_36060118_36060156_36063794_36063881_36065576_36065625_36080604_36080639_36083364_36083563_36085265
H1_mix_00085722	chr9	+	1717	9	FSM	ENSG00000122707.12	ENST00000479053.1	1717	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_8	68.1311923791152	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTCGCTACTGTACTATT	3	True	NA	30	True	ATTAAA	-27	NA	36036939	36086195	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_36037099_36052264_36052324_36058826_36058902_36060118_36060156_36063794_36063881_36065576_36065625_36080604_36080639_36083364_36083563_36085174
H1_mix_00085723	chr9	+	2446	9	NIC	ENSG00000122707.12	novel	1717	9	NA	NA	0	1456	combination_of_known_junctions	FALSE	canonical	3	55	junction_8	61.5912686587961	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAACAGCTAATTAAGC	3	True	NA	NA	False	AATAAA	-9	NA	36036939	36087651	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_36037099_36052264_36052324_36058826_36058902_36060118_36060156_36063794_36063881_36065576_36065625_36080604_36080639_36083364_36083563_36085901
H1_mix_00085725	chr9	+	1917	3	FSM	ENSG00000122694.16	ENST00000396613.7	1917	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	117	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAATGTGATTCATACTT	113	False	NA	25	True	AATAAA	-26	NA	36136535	36163913	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_36136792_36147785_36147895_36162361
H1_mix_00085726	chr9	+	1895	5	FSM	ENSG00000122694.16	ENST00000377960.9	1895	5	0	0	0	0	multi-exon	TRUE	canonical	3	238	junction_1	13.7727085208393	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCTCCTCCAATGTGATT	10	True	NA	18	True	AATAAA	-19	NA	36136732	36163906	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_36136792_36147785_36147895_36148546_36148651_36150871_36150950_36162361
H1_mix_00085729	chr9	+	1078	5	FSM	ENSG00000122705.17	ENST00000345519.10	1078	5	0	0	0	0	multi-exon	FALSE	canonical	3	1532	junction_1	71.8692388995459	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGAAGCTTCTTTATT	-18	True	NA	30	True	AATAAA	-19	NA	36190920	36212059	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_36191274_36197550_36197589_36198978_36199097_36204067_36204180_36211602
H1_mix_00085732	chr9	+	2370	17	FSM	ENSG00000165304.8	ENST00000541717.4	2363	17	-9	2	-9	0	multi-exon	FALSE	canonical	3	29	junction_12	111.530527631452	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGGCTTCTCTTTTTTGT	NA	False	NA	-53	True	AATAAA	-16	NA	36572852	36677681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_36573008_36581643_36581740_36583626_36583713_36589535_36589653_36594627_36594772_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
H1_mix_00085733	chr9	+	2351	17	FSM	ENSG00000165304.8	ENST00000536860.5	2342	17	-9	0	-9	0	multi-exon	FALSE	canonical	3	37	junction_4	109.831618284536	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTCTCTTTTTTGTAT	NA	False	NA	-51	True	AATAAA	-18	NA	36572852	36677683	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_36573008_36581643_36581740_36583626_36583713_36589535_36589653_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
H1_mix_00085734	chr9	+	2684	18	NIC	ENSG00000165304.8	novel	2452	18	NA	NA	-9	0	combination_of_known_junctions	TRUE	canonical	3	37	junction_1	107.133522743825	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGGCTTCTCTTTTTTGT	NA	False	NA	-53	True	AATAAA	-16	NA	36572852	36677681	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_36573199_36581643_36581740_36583626_36583713_36589535_36589653_36594627_36594772_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
H1_mix_00085735	chr9	+	2125	15	FSM	ENSG00000165304.8	ENST00000536987.5	2125	15	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	133.975801196046	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGGCTTCTCTTTTTTGT	0	True	NA	-53	True	AATAAA	-16	NA	36572894	36677681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_36573008_36589535_36589653_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
H1_mix_00085736	chr9	+	2452	18	FSM	ENSG00000165304.8	ENST00000298048.7	2452	18	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_2	82.5116957212482	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCTTCTCTTTTTTGTA	0	True	NA	-52	True	AATAAA	-17	NA	36572894	36677682	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_36573008_36581643_36581740_36583626_36583713_36589535_36589653_36594627_36594772_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
H1_mix_00085737	chr9	+	4138	6	ISM	ENSG00000165304.8	ENST00000545008.5	2236	16	81453	0	24343	0	3prime_fragment	FALSE	canonical	3	325	junction_1	65.9987878676571	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGGCTTCTCTTTTTTGT	NA	False	NA	-53	True	AATAAA	-16	NA	36654349	36677681	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
H1_mix_00085738	chr9	+	1798	2	FSM	ENSG00000281649.3	ENST00000653711.1	1806	2	8	0	3	0	multi-exon	FALSE	canonical	3	18	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAATTCTCTTCTTTGTTT	NA	False	NA	NA	False	AATATA	-18	NA	37079861	37088288	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_37080039_37086667
H1_mix_00085741	chr9	+	4936	2	FSM	ENSG00000281649.3	ENST00000660341.1	4958	2	22	0	3	0	multi-exon	FALSE	canonical	3	81	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTGACAATCTTTTTT	NA	False	NA	NA	False	TTTAAA	-21	NA	37079861	37090928	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_37080537_37086667
H1_mix_00085745	chr9	+	2672	9	NIC	ENSG00000147905.18	novel	2828	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	42.1893055169198	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACATGTGTTTATTATG	44	False	NA	12	True	AATAAA	-13	NA	37120635	37358146	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_37120777_37126311_37126943_37302187_37302232_37304187_37304314_37305543_37305715_37327798_37327835_37349356_37349453_37354709_37354825_37356834
H1_mix_00085750	chr9	+	1893	4	FSM	ENSG00000137106.18	ENST00000480596.5	1893	4	0	0	0	0	multi-exon	FALSE	canonical	3	546	junction_3	5.35412613473634	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGACCGTCTTGGCCTGTA	5835	False	NA	8	True	ATTAAA	-11	NA	37428537	37436987	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_37429837_37430510_37430647_37432007_37432139_37436660
H1_mix_00085758	chr9	+	3024	9	FSM	ENSG00000165275.10	ENST00000297994.4	2293	9	-4	-727	-2	727	multi-exon	FALSE	canonical	3	43	junction_4	7.3474060048428	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACACGAAGCTCCTTGGTC	-10	True	NA	NA	False	ACTAAA	-30	NA	37753800	37779699	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_37753853_37761902_37762118_37762576_37762686_37763628_37763754_37768075_37768229_37769940_37770020_37770671_37770740_37776281_37776406_37777600
H1_mix_00085760	chr9	+	7269	2	ISM	ENSG00000165275.10	ENST00000297994.4	2293	9	17405	-701	1653	701	3prime_fragment	FALSE	canonical	3	48	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCCAGTCCTTAGAAAACA	NA	False	NA	NA	False	ACTAAA	-4	NA	37771209	37779673	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_37776406_37777600
H1_mix_00085763	chr9	+	2035	6	NIC	ENSG00000122741.16	novel	7906	7	NA	NA	18	568	combination_of_known_junctions	FALSE	canonical	3	33	junction_2	39.3120846559935	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGGCCTTTTAAAGTTA	21	True	NA	12	True	AATAAA	-22	NA	37800814	37862009	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_37801406_37819287_37819402_37854779_37854983_37857240_37857352_37860047_37860194_37861139
H1_mix_00085764	chr9	+	863	1	FSM	ENSG00000213839.4	ENST00000436507.2	708	1	4	-159	4	159	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCACCCTACAGGAAGGCC	NA	False	NA	NA	False	TTTAAA	-21	NA	37885686	37886549	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_37885700_37886500
H1_mix_00085768	chr9	+	579	4	ISM	ENSG00000276291.6	ENST00000610803.5	1068	7	-2	25475	-2	-4360	5prime_fragment	FALSE	canonical	3	22	junction_1	20.3141986469235	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTCAAACCAAAGGCAAAGAA	2	True	NA	NA	False	NA	NA	NA	40992257	41007547	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_40992480_40993252_40993435_40994632_40994700_41007439
H1_mix_00085769	chr9	+	1103	6	NNC	ENSG00000276291.6	novel	1068	7	NA	NA	0	-1073	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	18.0820352836731	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGCATTAACTGCTTAC	5	True	NA	0	True	AATAAA	-27	NA	40992260	41014131	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_40992480_40993252_40993435_40994632_40994700_41007439_41007610_41011616_41011731_41013780
H1_mix_00085771	chr9	+	1536	7	NNC	ENSG00000276291.6	novel	2139	9	NA	NA	-2	-1065	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_4	17.1796067734069	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTGCTTACTGTTTTCA	2	True	NA	8	True	AATAAA	-35	NA	40992257	41014139	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_40992776_40993252_40993435_40994632_40994700_41007439_41007610_41008880_41009007_41011616_41011731_41013780
H1_mix_00085773	chr9	+	1628	1	FSM	ENSG00000279456.1	ENST00000624467.1	1628	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAGAAAAATTAG	NA	False	NA	NA	False	AATACA	-19	NA	41061289	41062917	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_41061300_41062900
H1_mix_00085776	chr9	+	1407	1	FSM	ENSG00000231527.7	ENST00000612999.1	1407	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATCAAAAACGAAAACAACAC	NA	False	NA	NA	False	AATATA	-27	NA	61972242	61973649	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_61972200_61973600
H1_mix_00085777	chr9	+	601	1	FSM	ENSG00000231995.2	ENST00000436561.1	601	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAACAACTCTTAAAAATAT	NA	False	NA	NA	False	ATTAAA	-15	NA	62266318	62266919	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_62266300_62266900
H1_mix_00085779	chr9	+	704	2	NNC	ENSG00000226007.3	novel	2245	2	NA	NA	-10	4186	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	0	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTATCATCTGTTCCAG	NA	False	NA	NA	False	AATAAA	-20	NA	62532353	62538910	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_62532689_62538541
H1_mix_00085780	chr9	+	2552	2	FSM	ENSG00000170161.7	ENST00000305709.5	2541	2	-11	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCGGGCCAGGCACGAT	NA	False	NA	NA	False	NA	NA	NA	62897437	62900104	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_62897735_62897849
H1_mix_00085781	chr9	+	1571	3	FSM	ENSG00000170161.7	ENST00000476224.2	1567	3	-4	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	3.5	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTGCTCTGTTTACTTA	NA	False	NA	NA	False	NA	NA	NA	62897367	62899777	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_62897735_62897849_62897980_62898703
H1_mix_00085783	chr9	+	520	3	NNC	ENSG00000170161.7	novel	667	3	NA	NA	241	3874	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	7	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCATCTGTTCCAGTTCT	NA	False	NA	NA	False	AATAAA	-24	NA	62897689	62903978	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_62897735_62897877_62897980_62903605
H1_mix_00085787	chr9	+	1413	16	FSM	ENSG00000147996.17	ENST00000497250.5	1411	16	-2	0	0	0	multi-exon	FALSE	canonical	3	139	junction_7	527.930652011543	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATATTTCAAGCATTTAT	4	False	NA	-1	True	AATAAA	-16	NA	65675893	65733670	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65693385_65693474_65698514_65698562_65700250_65700338_65702969_65703015_65708901_65708959_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
H1_mix_00085791	chr9	+	1666	15	FSM	ENSG00000147996.17	ENST00000382405.8	1662	15	-4	0	0	0	multi-exon	FALSE	canonical	3	171	junction_4	521.770010519531	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGTTGATGTTGACGAC	8	False	NA	NA	False	AATAAA	-16	NA	65675923	65734041	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65698514_65698562_65700250_65700338_65702969_65703015_65708901_65708959_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
H1_mix_00085792	chr9	+	1565	17	NIC	ENSG00000147996.17	novel	1411	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	532.434910194429	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATATTTCAAGCATTTAT	0	True	NA	-1	True	AATAAA	-16	NA	65675927	65733670	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65693385_65693474_65694904_65695045_65698514_65698562_65700250_65700338_65702969_65703015_65708901_65708959_65720040_65720093_65731629_65731699_65731801_65731868_65732946_65733123_65733509
H1_mix_00085794	chr9	+	3326	6	FSM	ENSG00000147996.17	ENST00000485088.5	3326	6	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_5	452.265674134131	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAAGTGTCACCATTTTA	NA	False	NA	NA	False	ATTAAA	-13	NA	65706432	65733992	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_65708959_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
H1_mix_00085797	chr9	+	765	6	NNC	ENSG00000147996.17	novel	722	4	NA	NA	-4187	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	661.90168454235	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTCAAGCATTTATTT	NA	False	NA	1	True	AATAAA	-18	NA	65715197	65733672	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_65715483_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
H1_mix_00085801	chr9	+	5478	5	FSM	ENSG00000274349.5	ENST00000612867.4	4160	5	8	-1326	8	1326	multi-exon	FALSE	canonical	2	4	junction_1	5.1234753829798	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATACCAGAGACAAGTC	NA	False	NA	NA	False	AATAAA	-20	NA	66900745	66922752	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_66900837_66903360_66903577_66908237_66908365_66908638_66908735_66917804
H1_mix_00085803	chr9	+	1747	3	FSM	ENSG00000196873.16	ENST00000478048.5	1736	3	-11	0	0	0	multi-exon	FALSE	canonical	3	961	junction_2	245	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAAGTACTCGTTTGTCA	0	True	NA	NA	False	ATTAAA	-45	NA	68241944	68249031	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_68242186_68245212_68245300_68247612
H1_mix_00085804	chr9	+	1685	15	FSM	ENSG00000196873.16	ENST00000360171.11	1685	15	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_12	381.345690567346	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACCTGGCTGAAGGAGTG	-1	True	NA	NA	False	AATAAA	-39	NA	68241982	68300035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_68242186_68245212_68245300_68247612_68247710_68248805_68248898_68256920_68256981_68258531_68258570_68264467_68264515_68266219_68266307_68268933_68268979_68274881_68274939_68285988_68286041_68297579_68297649_68297751_68297818_68298963_68299094_68299480
H1_mix_00085805	chr9	+	1819	16	FSM	ENSG00000196873.16	ENST00000377344.6	1813	16	-6	0	0	0	multi-exon	FALSE	canonical	3	29	junction_7	432.252837533261	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGTCACCATTTTATG	-1	True	NA	NA	False	ATTAAA	-15	NA	68241982	68299965	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_68242186_68245212_68245300_68247612_68247710_68248805_68248898_68258531_68258570_68259346_68259435_68260856_68260997_68264467_68264515_68268933_68268979_68269599_68269723_68274881_68274939_68285988_68286041_68297579_68297649_68297751_68297818_68298963_68299094_68299480
H1_mix_00085809	chr9	+	2648	4	FSM	ENSG00000165060.15	ENST00000644653.1	2632	4	-16	0	-16	0	multi-exon	FALSE	canonical	3	39	junction_2	207.192342200832	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGGCCAGTGCCAGTGAG	-37	True	NA	-38	True	AATAAA	-36	NA	69035734	69074850	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_69035948_69046384_69046483_69064937_69065036_69072611
H1_mix_00085810	chr9	+	6994	5	FSM	ENSG00000165060.15	ENST00000484259.3	6978	5	-17	1	-16	-1	multi-exon	FALSE	canonical	3	476	junction_4	22.1246468898376	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCCAAGAGTGTTAGCAAG	-37	True	NA	2	True	AATAAA	-16	NA	69035734	69079075	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_69035948_69046384_69046483_69053139_69053261_69064937_69065036_69072611
H1_mix_00085811	chr9	+	933	5	FSM	ENSG00000165060.15	ENST00000396366.6	922	5	-11	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	197.010786506729	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCTTATGCCTATACCT	-21	True	NA	93	True	NA	NA	NA	69035750	69073022	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_69035948_69046384_69046483_69053139_69053261_69064937_69065044_69072611
H1_mix_00085814	chr9	+	4894	24	NIC	ENSG00000119139.21	novel	5085	19	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	73.9396371595724	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTCTTTGTGGTGGAT	0	True	NA	7	True	AATAAA	-21	NA	69121292	69255201	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_69121726_69151650_69151772_69212547_69212602_69216338_69216464_69218256_69218360_69220886_69221497_69225303_69225408_69226021_69226176_69227764_69227874_69227980_69228115_69229183_69229251_69230081_69230233_69234438_69234548_69236027_69236239_69236948_69237137_69237877_69237974_69238709_69238790_69239936_69240148_69246689_69246791_69248011_69248225_69249374_69249486_69251034_69251365_69252814_69252901_69254208
H1_mix_00085817	chr9	+	4068	21	FSM	ENSG00000119139.21	ENST00000348208.9	4055	21	-15	2	-15	0	multi-exon	FALSE	canonical	3	18	junction_1	95.8026095677983	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTAATTTTCTTTGTGGTGG	1	True	NA	5	True	AATAAA	-19	NA	69174261	69255199	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_69174433_69212547_69212602_69216338_69216464_69218256_69218360_69220886_69221497_69225303_69225408_69226021_69226176_69227764_69227874_69227980_69228115_69229183_69229251_69230081_69230233_69234438_69234548_69236027_69236239_69236948_69237137_69237877_69237974_69238709_69238790_69239936_69240148_69246689_69246791_69248011_69248225_69252814_69252901_69254208
H1_mix_00085818	chr9	+	4509	23	FSM	ENSG00000119139.21	ENST00000377245.9	4503	23	-15	9	-15	0	multi-exon	FALSE	canonical	3	18	junction_1	72.1711836681796	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTAATTTTCTTTGTGGTGG	1	True	NA	5	True	AATAAA	-19	NA	69174261	69255199	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_69174433_69212547_69212602_69216338_69216464_69218256_69218360_69220886_69221497_69225303_69225408_69226021_69226176_69227764_69227874_69227980_69228115_69229183_69229251_69230081_69230233_69234438_69234548_69236027_69236239_69236948_69237137_69237877_69237974_69238709_69238790_69239936_69240148_69246689_69246791_69248011_69248225_69249374_69249486_69251034_69251365_69252814_69252901_69254208
H1_mix_00085820	chr9	+	2216	11	FSM	ENSG00000135063.20	ENST00000455972.6	2216	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	21.9462980933004	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGATCACGGACAATAAATC	NA	False	NA	121	True	NA	NA	NA	69324566	69392558	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_69324631_69336212_69336270_69371498_69371610_69375735_69375865_69377369_69377478_69377610_69377745_69383629_69383760_69383946_69384026_69385794_69385948_69388157_69388451_69391600
H1_mix_00085823	chr9	+	849	6	FSM	ENSG00000204711.9	ENST00000377197.8	844	6	-5	0	-5	0	multi-exon	FALSE	canonical	3	30	junction_2	43.1249347825594	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAGTAGATTCCTTTAAG	0	True	NA	16	True	AATAAA	-17	NA	69820811	69906227	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_69821032_69844516_69844626_69856554_69856674_69857908_69857978_69886837_69886896_69905953
H1_mix_00085824	chr9	+	810	6	FSM	ENSG00000204711.9	ENST00000466872.2	794	6	-16	0	-5	0	multi-exon	FALSE	canonical	2	5	junction_3	56.5848036136912	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAGTAGATTCCTTTAAG	0	True	NA	16	True	AATAAA	-17	NA	69820811	69906227	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_69821032_69856554_69856674_69857908_69857978_69885052_69885123_69886837_69886896_69905953
H1_mix_00085827	chr9	+	474	1	FSM	ENSG00000236801.1	ENST00000446071.1	474	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGCAGATTAGATTTTTA	NA	False	NA	NA	False	NA	NA	NA	70217194	70217668	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_70217200_70217700
H1_mix_00085829	chr9	+	5949	25	FSM	ENSG00000198887.9	ENST00000361138.7	5949	25	0	0	0	0	multi-exon	FALSE	canonical	2	90	junction_11	25.1933839970382	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTGTATGTTATTTTA	10	True	NA	32	True	AATAAA	-18	NA	70258977	70354873	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_70259264_70264303_70264446_70267922_70267976_70277309_70277473_70278490_70278626_70280758_70280900_70282421_70282584_70286199_70286272_70297965_70298222_70300045_70300201_70305246_70305361_70314741_70314837_70315445_70315579_70318513_70318688_70318793_70318964_70323482_70323607_70324020_70324144_70344143_70344270_70346604_70346650_70347065_70347162_70347612_70347718_70347918_70348039_70350113_70350294_70350375_70350472_70352190
H1_mix_00085832	chr9	+	5021	7	FSM	ENSG00000198887.9	ENST00000471372.1	910	7	-1483	-2628	-1483	0	multi-exon	FALSE	canonical	3	152	junction_1	19.1891172861657	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTGTATGTTATTTTA	NA	False	NA	32	True	AATAAA	-18	NA	70344908	70354873	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_70346650_70347065_70347162_70347612_70347718_70347918_70348039_70350113_70350294_70350375_70350472_70352190
H1_mix_00085835	chr9	+	1185	4	FSM	ENSG00000155621.15	ENST00000334731.7	1185	4	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	14.0079342596338	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGTCGCTTATGTTTAA	2	True	NA	15	True	AATAAA	-16	NA	71911638	71973457	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_71911837_71947005_71947113_71971504_71971619_71972691
H1_mix_00085841	chr9	+	1348	10	FSM	ENSG00000134996.12	ENST00000346234.7	1348	10	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_8	19.5946578761649	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTGATTTTATTTTTT	-17	True	NA	99	True	AGTAAA	-18	NA	75088513	75147265	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_75088727_75117503_75117551_75127568_75127620_75130577_75130642_75131769_75131824_75133293_75133402_75134345_75134396_75137537_75137617_75140833_75140933_75146682
H1_mix_00085846	chr9	+	5586	4	FSM	ENSG00000187210.14	ENST00000376730.5	5566	4	-20	0	10	0	multi-exon	FALSE	canonical	3	71	junction_2	87.4922218765125	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTTGTCTGCAGAAATTT	-36	True	NA	11	True	ATTAAA	-21	NA	76459161	76507416	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_76459306_76460059_76460178_76500915_76501062_76502238
H1_mix_00085854	chr9	+	11243	17	FSM	ENSG00000148019.14	ENST00000643273.2	11233	17	-10	0	0	0	multi-exon	FALSE	canonical	3	96	junction_15	55.928386129049	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGGCTGCAGGAGTGAGT	-17	True	NA	NA	False	AATAAA	-20	NA	78236064	78279690	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_78236604_78240022_78240196_78240291_78240365_78241695_78241800_78243461_78243637_78246668_78246783_78248290_78248356_78248761_78248874_78251907_78252044_78253231_78253278_78254835_78254965_78262906_78262985_78264149_78264317_78265371_78265544_78265858_78265907_78266441_78266704_78270840
H1_mix_00085857	chr9	+	2542	15	FSM	ENSG00000148019.14	ENST00000277082.9	2542	15	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_14	36.4372538672683	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGCATATGGTGTCTTA	150	False	NA	23	True	AATAAA	-17	NA	78236231	78267067	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_78236604_78240022_78240196_78240291_78240365_78241695_78241800_78243461_78243637_78246668_78246783_78248290_78248356_78248761_78248874_78251907_78252044_78253231_78253278_78254835_78254965_78262906_78262985_78264149_78264317_78265371_78265544_78266441
H1_mix_00085859	chr9	+	2484	8	FSM	ENSG00000135069.14	ENST00000347159.6	1411	8	-434	-639	-416	0	multi-exon	TRUE	canonical	3	145	junction_7	572.671149000855	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTGTCAATGAATTTCT	NA	False	NA	15	True	ATTAAA	-17	NA	78296708	78330093	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_78297271_78300601_78300663_78301953_78302024_78304734_78304941_78306313_78306487_78308413_78308584_78317675_78317805_78328980
H1_mix_00085860	chr9	+	2206	9	FSM	ENSG00000135069.14	ENST00000376588.4	2206	9	0	0	0	0	multi-exon	FALSE	canonical	3	1479	junction_7	107.242715370322	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTGTCAATGAATTTCT	-2	True	NA	15	True	ATTAAA	-17	NA	78297124	78330093	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_78297271_78300601_78300663_78301953_78302024_78304734_78304941_78306313_78306487_78308413_78308584_78317675_78317805_78328050_78328189_78328980
H1_mix_00085861	chr9	+	262	1	FSM	ENSG00000186940.6	ENST00000461726.1	456	1	-37	231	-37	-231	mono-exon	FALSE	NA	NA	NA	NA	NA	266	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGTCACGCCGTTACCGG	-1	True	NA	NA	False	NA	NA	NA	79391266	79391528	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_79391300_79391500
H1_mix_00085867	chr9	+	531	5	FSM	ENSG00000106829.20	ENST00000466428.5	531	5	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_4	29.5296461204668	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACGTGGCCTTTCCATTTT	307	False	NA	NA	False	NA	NA	NA	79573502	79627448	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_79573787_79574872_79574937_79576132_79576178_79612655_79612719_79627373
H1_mix_00085869	chr9	+	3374	3	FSM	ENSG00000178966.17	ENST00000445877.6	3300	3	-74	0	-67	0	multi-exon	TRUE	canonical	3	199	junction_1	46.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGGTGTTTTATTTTA	134	False	NA	89	True	ATTAAA	-21	NA	83980730	84004074	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_83980892_83999708_83999798_84000950
H1_mix_00085870	chr9	+	3487	3	FSM	ENSG00000178966.17	ENST00000325875.7	3420	3	-67	0	-67	0	multi-exon	FALSE	canonical	3	47	junction_1	122.5	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGGTGTTTTATTTTA	134	False	NA	89	True	ATTAAA	-21	NA	83980730	84004074	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_83981005_83999708_83999798_84000950
H1_mix_00085871	chr9	+	629	1	FSM	ENSG00000213711.3	ENST00000415677.1	814	1	29	156	29	-156	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCGAGCTGATCACCAAC	NA	False	NA	NA	False	AAAAAG	-35	NA	85898931	85899560	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_85898900_85899600
H1_mix_00085872	chr9	+	5813	23	FSM	ENSG00000135040.16	ENST00000361671.10	5813	23	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	35.1589366512453	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGATCATAAAATGCAAG	-8	True	NA	NA	False	NA	NA	NA	85941145	86025462	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_85941274_85942154_85942284_85956359_85956394_85958471_85958587_85959792_85959868_85962012_85962181_85974966_85975034_85975113_85975158_85976684_85976736_85977362_85977447_85978266_85978382_85996398_85996578_86003584_86003645_86007357_86007465_86009864_86009932_86013045_86013145_86013718_86013898_86016538_86016676_86017497_86017566_86018254_86018396_86018698_86018822_86020888_86020970_86021900
H1_mix_00085873	chr9	+	4605	23	NIC	ENSG00000135040.16	novel	5813	23	NA	NA	0	-1809	combination_of_known_junctions	TRUE	canonical	3	47	junction_1	57.6935477722202	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGCATTTTTTAGCTAC	-8	True	NA	NA	False	NA	NA	NA	85941145	86023653	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_85941875_85942154_85942284_85956359_85956394_85958471_85958587_85959792_85959868_85962012_85962181_85974966_85975034_85975113_85975158_85976684_85976736_85977362_85977447_85978266_85978382_85996398_85996578_86003584_86003645_86007357_86007465_86009864_86009932_86013045_86013145_86013718_86013898_86016538_86016676_86017497_86017566_86018254_86018396_86018698_86018822_86020888_86020970_86021900
H1_mix_00085877	chr9	+	4241	3	Genic_Genomic	ENSG00000288968.1	novel	219	1	NA	NA	161	9908	multi-exon	FALSE	canonical	3	29	junction_1	59.5	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTTTCTCAAGCTGTTG	133	False	NA	14	True	AGTAAA	-16	NA	87411052	87421018	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_+_87411295_87413187_87413472_87417303
H1_mix_00085878	chr9	+	1292	2	Genic_Genomic	ENSG00000288968.1	novel	219	1	NA	NA	169	9675	multi-exon	FALSE	canonical	3	43	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTAATGACATTTTCT	141	False	NA	34	True	AGTAAA	-19	NA	87411060	87420785	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_+_87411295_87419727
H1_mix_00085880	chr9	+	5759	26	FSM	ENSG00000196730.13	ENST00000472284.5	5759	26	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	85.9873106917527	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGTTTTTTTGATCTTTA	-5	True	NA	15	True	AATAAA	-15	NA	87497680	87708630	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_87497773_87498969_87499140_87604953_87605176_87637942_87638082_87639353_87639484_87639649_87639699_87639788_87639816_87640297_87640451_87640801_87640848_87641968_87642059_87643375_87643469_87645894_87646015_87646460_87646560_87647304_87647404_87648780_87648880_87649920_87650119_87651526_87651725_87658028_87658128_87668596_87668675_87681403_87681627_87686550_87686740_87697006_87697205_87698655_87698795_87700116_87700238_87703028_87703218_87706131
H1_mix_00085884	chr9	+	5912	26	FSM	ENSG00000196730.13	ENST00000408954.8	5912	26	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_10	34.8033101873945	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTTTGATCTTTAATTC	-6	True	NA	19	True	AATAAA	-19	NA	87497866	87708634	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_87498108_87498969_87499140_87604953_87605176_87637942_87638082_87639353_87639484_87639649_87639699_87639788_87639816_87640297_87640451_87640801_87640848_87641968_87642059_87643375_87643469_87645894_87646015_87646460_87646560_87647304_87647404_87648780_87648880_87649920_87650119_87651526_87651725_87658028_87658128_87668596_87668675_87681403_87681627_87686550_87686740_87697006_87697205_87698655_87698795_87700116_87700238_87703028_87703218_87706131
H1_mix_00085889	chr9	+	1662	8	FSM	ENSG00000135047.16	ENST00000676531.1	1813	8	151	0	151	0	multi-exon	FALSE	canonical	3	18	junction_1	104.250874806685	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGGGCTTCTTTCTAT	3264	False	NA	22	True	AATAAA	-18	NA	87725885	87731393	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_87726250_87727593_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380_87730499_87731007
H1_mix_00085891	chr9	+	1794	8	FSM	ENSG00000135047.16	ENST00000679149.1	2129	8	335	0	151	0	multi-exon	FALSE	canonical	3	83	junction_1	82.1787499222002	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGCTGTGCCAGTGGCT	3264	False	NA	10	True	AATAAA	-24	NA	87725885	87731466	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_87726309_87727593_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380_87730499_87731007
H1_mix_00085893	chr9	+	1596	9	FSM	ENSG00000135047.16	ENST00000676881.1	1593	9	-3	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	134.568523436946	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGGGCTTCTTTCTAT	0	True	NA	22	True	AATAAA	-18	NA	87726118	87731393	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_87726309_87727360_87727469_87727593_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380_87730499_87731007
H1_mix_00085894	chr9	+	1651	8	FSM	ENSG00000135047.16	ENST00000343150.10	1654	8	0	3	0	0	multi-exon	FALSE	canonical	3	87	junction_1	80.8326565649487	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGCTGTGCCAGTGGCT	0	True	NA	10	True	AATAAA	-24	NA	87726118	87731466	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_87726399_87727593_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380_87730499_87731007
H1_mix_00085895	chr9	+	1370	7	FSM	ENSG00000135047.16	ENST00000677864.1	1373	7	0	3	0	0	multi-exon	FALSE	canonical	1	2	junction_1	115.336343891343	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGCTGTGCCAGTGGCT	0	True	NA	10	True	AATAAA	-24	NA	87726118	87731466	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_87726254_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380_87730499_87731007
H1_mix_00085897	chr9	+	2392	7	FSM	ENSG00000135047.16	ENST00000676480.1	2392	7	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_5	24.1315837303177	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTTACCTGTTTAAATA	101	False	NA	-17	True	TTTAAA	-11	NA	87726460	87731354	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380_87730499_87731007
H1_mix_00085900	chr9	+	4473	6	FSM	ENSG00000106723.17	ENST00000375859.4	4459	6	-14	0	0	0	multi-exon	FALSE	canonical	3	606	junction_4	104.09149821191	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTGACTGTAAAGTTTGT	16	True	NA	28	True	AATAAA	-15	NA	88388429	88478694	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_88388539_88426381_88426592_88448940_88448990_88462495_88462750_88468371_88468606_88475077
H1_mix_00085906	chr9	+	3346	17	NIC	ENSG00000187742.15	novel	3481	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	108	junction_6	65.9004635321331	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTCAGACTCTGGTG	-18	True	NA	16	True	AATAAA	-15	NA	89318499	89359642	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_89318613_89319651_89319798_89325426_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334635_89334731_89338457_89338581_89339863_89339954_89341346_89341480_89346881_89347049_89348078_89348215_89349775_89349930_89350631_89350853_89357410_89357566_89357998_89358192_89358720
H1_mix_00085907	chr9	+	3339	17	FSM	ENSG00000187742.15	ENST00000339901.8	3320	17	-19	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	76.7242424205023	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTCAGACTCTGGTG	-18	True	NA	16	True	AATAAA	-15	NA	89318499	89359642	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_89318613_89319651_89319798_89325547_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334521_89334731_89338457_89338581_89339863_89339954_89341346_89341480_89346881_89347049_89348078_89348215_89349775_89349930_89350631_89350853_89357410_89357566_89357998_89358192_89358720
H1_mix_00085913	chr9	+	4533	8	FSM	ENSG00000188312.14	ENST00000375587.8	8293	8	-311	4071	-311	1294	multi-exon	FALSE	canonical	3	72	junction_5	5.79232426648951	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGCCAAGTATTACAAAACC	-9	True	NA	NA	False	TATAAA	-27	NA	92325641	92616458	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_92326106_92332169_92332352_92337540_92337630_92345698_92345788_92379762_92379860_92611313_92611394_92612522_92612615_92613018
H1_mix_00085918	chr9	+	1065	4	FSM	ENSG00000157303.11	ENST00000617293.4	1076	4	11	0	-2	0	multi-exon	FALSE	canonical	2	6	junction_3	16.779617264871	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAACTACCTCAGCATCT	-12	True	NA	26	True	AATAAA	-38	NA	93058698	93085132	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_93058831_93075783_93075973_93077845_93077994_93084536
H1_mix_00085922	chr9	+	869	7	NNC	ENSG00000165233.18	novel	759	6	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	88	junction_1	67.4505992066292	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTCTCTCAGCCTGCCTC	12	True	NA	0	True	ATTAAA	-6	NA	93096181	93113272	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_93096274_93096296_93096353_93107673_93107828_93110567_93110722_93111878_93111939_93112217_93112290_93112991
H1_mix_00085924	chr9	+	759	6	FSM	ENSG00000165233.18	ENST00000490488.5	759	6	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	57.1895095275349	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTCTCTCAGCCTGCCTC	8	False	NA	0	True	ATTAAA	-6	NA	93096314	93113272	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_93096353_93107673_93107828_93110567_93110722_93111878_93111939_93112217_93112290_93112991
H1_mix_00085926	chr9	+	6706	27	NIC	ENSG00000165238.17	novel	7080	30	NA	NA	30	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_21	11.2828743872238	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGGACTTTGGTTTTTC	-5	True	NA	12	True	AATAAA	-15	NA	93184168	93320564	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_93184386_93184927_93185611_93229695_93229869_93230887_93231109_93234807_93234966_93238232_93238322_93239756_93239977_93247542_93247835_93252882_93253083_93256298_93256455_93256947_93257140_93258930_93259615_93261813_93262108_93262669_93262720_93263565_93263735_93263916_93264034_93267745_93267917_93268019_93268066_93268626_93268747_93288787_93289621_93289977_93290048_93292310_93292397_93292490_93293174_93297852_93298068_93308327_93308585_93317519_93317632_93320366
H1_mix_00085929	chr9	+	2013	8	NIC	ENSG00000165238.17	novel	6834	29	NA	NA	47	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_5	10.900290203963	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGACTTTGGTTTTTCAA	NA	False	NA	14	True	AATAAA	-17	NA	93289233	93320566	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_93289621_93289977_93290048_93292307_93292397_93292490_93293174_93297852_93298068_93308327_93308585_93317519_93317632_93320366
H1_mix_00085931	chr9	+	2258	3	FSM	ENSG00000165238.17	ENST00000467401.1	2258	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	6	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGGACTTTGGTTTTTC	8942	False	NA	12	True	AATAAA	-15	NA	93306636	93320564	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_93308585_93317519_93317632_93320366
H1_mix_00085948	chr9	+	3130	17	FSM	ENSG00000148120.18	ENST00000375315.8	3130	17	0	0	0	0	multi-exon	TRUE	canonical	2	12	junction_7	12.9204295594225	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTGTTTGCTTCTAAATT	1	True	NA	16	True	AATAAA	-23	NA	94726698	95087159	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_94726752_94759648_94760581_94773001_94773169_94792764_94792919_94800756_94801003_94923985_94924176_94928424_94928532_94955176_94955280_94955907_94956016_94967757_94967802_94979366_94979428_95005157_95005221_95005541_95005617_95060693_95060811_95080693_95080781_95082574_95082720_95086681
H1_mix_00085949	chr9	+	868	6	NIC	ENSG00000148120.18	novel	919	6	NA	NA	319	-3	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	14.3052437937981	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATACGTGTTTGCTTCTAA	24	True	NA	13	True	AATAAA	-20	NA	95004235	95087156	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_95004287_95005157_95005221_95005541_95005617_95060693_95060811_95080693_95080781_95086681
H1_mix_00085951	chr9	+	1598	1	FSM	ENSG00000271155.1	ENST00000604104.1	1402	1	77	-273	77	273	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACACACACGCACACACAC	97	False	NA	NA	False	NA	NA	NA	95506311	95507909	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_95506300_95507900
H1_mix_00085953	chr9	+	10250	19	FSM	ENSG00000182150.19	ENST00000653738.2	10245	19	-7	2	0	-2	multi-exon	FALSE	canonical	3	43	junction_3	11.5139475269918	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCACACATAGCATTGTT	-6	True	NA	16	True	ATTAAA	-13	NA	95875683	96018445	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_95876085_95880868_95881294_95897848_95897972_95907077_95907272_95915667_95915830_95916226_95916435_95921174_95921316_95922304_95922419_95923259_95923380_95928078_95928151_95928718_95928865_95941453_95941550_95955913_95956014_95966561_95966715_95970575_95970657_95971932_95973089_95978060_95978216_96004519_96004702_96012224
H1_mix_00085956	chr9	+	559	1	FSM	ENSG00000238251.2	ENST00000457472.2	514	1	-26	-19	-26	19	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGCCAGGATGGTCTCGA	-2	True	NA	NA	False	NA	NA	NA	96407257	96407816	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_96407300_96407800
H1_mix_00085960	chr9	+	841	4	FSM	ENSG00000224848.3	ENST00000666834.2	897	4	54	2	17	0	multi-exon	FALSE	canonical	3	11	junction_1	4.49691252107735	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCAGTCTGTGGTTCTTT	24	False	NA	6	True	AATAAA	-14	NA	96687076	96773977	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_96687108_96687197_96687325_96720965_96721131_96773459
H1_mix_00085963	chr9	+	5206	2	Genic_Genomic	ENSG00000289356.1	novel	96	1	NA	NA	-246	5079	multi-exon	TRUE	canonical	0	0	junction_1	0	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGAAATTATCTTTTGTT	NA	False	NA	58	True	NA	NA	NA	97214587	97220008	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_+_97216492_97216706
H1_mix_00085965	chr9	+	854	2	Genic_Genomic	ENSG00000289356.1	novel	96	1	NA	NA	-150	5078	multi-exon	FALSE	canonical	3	1461	junction_1	0	206	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCATGAAATTATCTTTTGT	NA	False	NA	57	True	NA	NA	NA	97214683	97220007	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_+_97215114_97219583
H1_mix_00085966	chr9	+	1884	3	Genic_Genomic	ENSG00000289356.1	novel	96	1	NA	NA	-119	5078	multi-exon	FALSE	canonical	3	95	junction_1	717.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCATGAAATTATCTTTTGT	NA	False	NA	57	True	NA	NA	NA	97214714	97220007	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_+_97215114_97216302_97217364_97219583
H1_mix_00085967	chr9	+	953	3	Genic_Genomic	ENSG00000289356.1	novel	96	1	NA	NA	-119	5078	multi-exon	FALSE	canonical	3	235	junction_1	647.5	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCATGAAATTATCTTTTGT	NA	False	NA	57	True	NA	NA	NA	97214714	97220007	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_+_97215114_97217233_97217364_97219583
H1_mix_00085968	chr9	+	3079	2	Genic_Genomic	ENSG00000289356.1	novel	96	1	NA	NA	-125	5078	multi-exon	FALSE	canonical	3	1530	junction_1	0	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCATGAAATTATCTTTTGT	NA	False	NA	57	True	NA	NA	NA	97214708	97220007	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_+_97217364_97219583
H1_mix_00085969	chr9	+	1099	3	Genic_Genomic	ENSG00000289356.1	novel	96	1	NA	NA	-119	5078	multi-exon	FALSE	canonical	3	284	junction_1	176.5	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCATGAAATTATCTTTTGT	NA	False	NA	57	True	NA	NA	NA	97214714	97220007	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_+_97215114_97217104_97217381_97219583
H1_mix_00085970	chr9	+	970	3	Genic_Genomic	ENSG00000289356.1	novel	96	1	NA	NA	-119	5078	multi-exon	FALSE	canonical	3	235	junction_1	201	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCATGAAATTATCTTTTGT	NA	False	NA	57	True	NA	NA	NA	97214714	97220007	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_+_97215114_97217233_97217381_97219583
H1_mix_00085971	chr9	+	2499	3	Genic_Genomic	ENSG00000289356.1	novel	96	1	NA	NA	-125	5658	multi-exon	FALSE	canonical	3	227	junction_1	651.5	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTCACATTTTGAGAAAAC	NA	False	NA	NA	False	GATAAA	-10	NA	97214708	97220587	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_+_97215114_97216273_97217364_97219583
H1_mix_00085972	chr9	+	1082	3	Genic_Genomic	ENSG00000289356.1	novel	96	1	NA	NA	-119	5078	multi-exon	FALSE	canonical	3	284	junction_1	623	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCATGAAATTATCTTTTGT	NA	False	NA	57	True	NA	NA	NA	97214714	97220007	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_+_97215114_97217104_97217364_97219583
H1_mix_00085973	chr9	+	1930	3	Genic_Genomic	ENSG00000289356.1	novel	96	1	NA	NA	-119	5078	multi-exon	FALSE	canonical	3	227	junction_1	205	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCATGAAATTATCTTTTGT	NA	False	NA	57	True	NA	NA	NA	97214714	97220007	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_+_97215114_97216273_97217381_97219583
H1_mix_00085977	chr9	+	6758	37	FSM	ENSG00000197816.16	ENST00000529487.3	7060	37	-4	306	-4	-79	multi-exon	FALSE	canonical	2	2	junction_19	7.94929921594925	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATACACAACTTGAGACCA	-7	True	NA	NA	False	TATAAA	-28	NA	97307654	97378445	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_97307807_97307982_97308133_97309413_97309605_97312112_97312202_97313235_97313346_97314392_97314522_97314617_97314729_97314850_97314947_97317064_97317229_97318462_97318583_97320125_97320206_97322832_97322922_97323780_97323904_97325018_97325193_97326553_97326670_97328019_97328147_97330153_97330194_97330321_97330768_97343339_97343564_97347313_97347490_97349110_97349292_97350408_97350556_97354568_97354714_97354891_97355009_97357626_97357726_97359981_97360102_97361725_97361899_97362195_97362442_97364050_97364129_97365672_97365740_97366558_97366701_97369921_97370083_97370640_97370779_97371594_97371707_97374542_97374649_97375453_97375590_97376762
H1_mix_00085978	chr9	+	689	3	FSM	ENSG00000197816.16	ENST00000528678.1	689	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	9	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTCTGGGCAAACTCCGC	NA	False	NA	NA	False	NA	NA	NA	97330397	97350503	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_97330768_97343339_97343564_97350408
H1_mix_00085980	chr9	+	1022	4	FSM	ENSG00000197816.16	ENST00000530551.5	665	4	-357	0	-357	0	multi-exon	FALSE	canonical	3	19	junction_1	11.0252236056942	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGATAAAGGAGGCTCAGC	8692	False	NA	NA	False	NA	NA	NA	97370982	97376818	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_97371707_97374542_97374649_97375453_97375590_97376762
H1_mix_00085987	chr9	+	2666	4	FSM	ENSG00000095380.11	ENST00000461452.1	3027	4	361	0	361	0	multi-exon	FALSE	canonical	3	711	junction_1	54.485472069779	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTCAGTTCCCTTGCTG	NA	False	NA	18	True	AATAAA	-14	NA	98075003	98083075	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_98077018_98078192_98078348_98080815_98081083_98082845
H1_mix_00085989	chr9	+	633	3	FSM	ENSG00000119514.7	ENST00000615204.1	633	3	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_1	9	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGATATTTCATTTTGTA	NA	False	NA	NA	False	NA	NA	NA	98837074	98844522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_98837149_98840001_98840134_98844095
H1_mix_00085992	chr9	+	5933	9	FSM	ENSG00000106799.13	ENST00000552516.5	5933	9	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	160.310587220558	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATATTTTAAAATAAAGTG	1	True	NA	-1	True	AATAAA	-25	NA	99105149	99153658	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_99105303_99128854_99129101_99132496_99132740_99137858_99138090_99142535_99142704_99144731_99144889_99146484_99146610_99147653_99147785_99149179
H1_mix_00085994	chr9	+	630	5	NNC	ENSG00000106803.10	novel	564	4	NA	NA	-42	26837	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1499.01475976723	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAACTGCTCTTATTTTTC	NA	False	NA	NA	False	NA	NA	NA	99222239	99257452	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_99222367_99222545_99222644_99227898_99228001_99230336_99230610_99257422
H1_mix_00085995	chr9	+	583	4	FSM	ENSG00000106803.10	ENST00000223641.5	564	4	-19	0	-19	0	multi-exon	FALSE	canonical	3	3374	junction_1	105.963306017801	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTCTGATCGTTGATGC	-12	True	NA	27	True	AATAAA	-19	NA	99222262	99230615	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_99222367_99222545_99222644_99227898_99228001_99230336
H1_mix_00085997	chr9	+	1674	4	FSM	ENSG00000119509.13	ENST00000374921.3	1654	4	-20	0	-4	0	multi-exon	FALSE	canonical	3	15	junction_3	16.4181471413663	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATAAGTGTTTTATAAAA	-4	True	NA	NA	False	ATTAAA	-33	NA	100099267	100130903	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_100099417_100104497_100104628_100126382_100126550_100129675
H1_mix_00086005	chr9	+	2102	3	FSM	ENSG00000066697.15	ENST00000622639.4	1748	3	-354	0	-68	0	multi-exon	FALSE	canonical	3	43	junction_1	176	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGACTTG	360	False	NA	NA	False	AAGAAA	-42	NA	100427074	100451711	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_100427571_100441905_100442357_100450556
H1_mix_00086008	chr9	+	1755	3	FSM	ENSG00000066697.15	ENST00000613183.1	1755	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	181.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGACTTG	2119	False	NA	NA	False	AAGAAA	-42	NA	100429513	100451711	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_100429663_100441905_100442357_100450556
H1_mix_00086009	chr9	+	1991	3	FSM	ENSG00000066697.15	ENST00000489377.1	1991	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	3.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACGTGTGAGTGTTGTT	232	False	NA	41	True	AATATA	-28	NA	100442148	100451229	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_100442357_100444127_100445238_100450556
H1_mix_00086011	chr9	+	3017	10	FSM	ENSG00000241697.5	ENST00000374879.5	2575	10	0	-442	0	442	multi-exon	FALSE	canonical	3	1155	junction_7	59.7087581722241	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTTTGCTCCAAGTGCC	-3	True	NA	NA	False	TTTAAA	-26	NA	100473148	100578078	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_100473741_100498764_100498875_100509004_100509135_100513306_100513334_100516674_100516772_100547743_100547893_100550094_100550161_100561396_100561521_100572517_100572677_100576515
H1_mix_00086016	chr9	+	3474	3	FSM	ENSG00000136870.11	ENST00000339664.7	3192	3	5	-287	5	281	multi-exon	FALSE	canonical	2	3	junction_1	7	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCATCTCTTTATGTGTG	-27	True	NA	NA	False	NA	NA	NA	101398855	101410941	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_101399190_101399883_101400011_101407928
H1_mix_00086018	chr9	+	375	3	FSM	ENSG00000155827.12	ENST00000479306.5	387	3	12	0	12	0	multi-exon	FALSE	canonical	1	2	junction_1	102.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCTAACTTGTTTATTTG	25	False	NA	NA	False	NA	NA	NA	101533916	101540370	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_101533969_101535397_101535553_101540202
H1_mix_00086020	chr9	+	5895	25	NIC	ENSG00000136824.19	novel	5928	25	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	3	49	junction_1	54.7192169930577	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGTATGAGCAGTATGT	-5	True	NA	7	True	AATAAA	-12	NA	104094310	104141417	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_104094449_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959_104102194_104102423_104102574_104111580_104111815_104113315_104113476_104113963_104114082_104114690_104114830_104116199_104116320_104118170_104118376_104120026_104120163_104123107_104123233_104124911_104125106_104126640_104126785_104127285_104127481_104129644_104129846_104132008_104132126_104134414_104134576_104138017_104138166_104139138
H1_mix_00086021	chr9	+	5916	25	NNC	ENSG00000136824.19	novel	5928	25	NA	NA	19	-2	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_1	55.0317932098245	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGTATGAGCAGTATGT	12	True	NA	7	True	AATAAA	-12	NA	104094327	104141417	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_104094487_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959_104102194_104102423_104102574_104111580_104111815_104113315_104113476_104113963_104114082_104114690_104114830_104116199_104116320_104118170_104118376_104120026_104120163_104123107_104123233_104124911_104125106_104126640_104126785_104127285_104127481_104129644_104129846_104132008_104132126_104134414_104134576_104138017_104138166_104139138
H1_mix_00086022	chr9	+	8543	25	FSM	ENSG00000136824.19	ENST00000374787.7	4266	25	3	-4280	3	2512	multi-exon	TRUE	canonical	3	24	junction_1	58.7024038879348	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTAGGTTGACTCTAGTT	-32	True	NA	32	True	NA	NA	NA	104094566	104143931	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_104094839_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959_104102194_104102423_104102574_104111580_104111815_104113315_104113476_104113963_104114082_104114690_104114830_104116199_104116320_104118170_104118376_104120026_104120163_104123107_104123233_104124911_104125106_104126640_104126785_104127285_104127481_104129644_104129846_104132008_104132126_104134414_104134576_104138017_104138166_104139138
H1_mix_00086024	chr9	+	10482	16	FSM	ENSG00000070214.16	ENST00000374720.8	10482	16	0	0	0	0	multi-exon	FALSE	canonical	3	483	junction_12	54.7795582311504	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTATTGTCTACTGTGTTG	20	True	NA	9	True	AATAAA	-21	NA	105244650	105397346	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_105244905_105299219_105299310_105309723_105309867_105335562_105335700_105348357_105348452_105356211_105356382_105358343_105358434_105361190_105361331_105362820_105363008_105364554_105364721_105365482_105365640_105366345_105366430_105374597_105374736_105383122_105383360_105385421_105385503_105389032
H1_mix_00086030	chr9	+	4379	3	Genic_Genomic	ENSG00000186051.7	novel	668	1	NA	NA	-6547	3562	multi-exon	FALSE	canonical	1	1	junction_1	18	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTGTTCATTTAAAGAAA	NA	False	NA	NA	False	AATAAA	-15	NA	105655909	105666686	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_+_105655997_105656220_105656313_105662486
H1_mix_00086042	chr9	+	1787	5	NIC	ENSG00000119328.12	novel	1901	6	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_2	78.8289287000654	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATCATTCGATGTATTAA	NA	False	NA	NA	False	AATAAA	-19	NA	108934383	108940954	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_108934566_108935637_108935690_108939195_108939273_108939384_108939455_108939548
H1_mix_00086046	chr9	+	6873	4	FSM	ENSG00000157654.19	ENST00000374525.5	6866	4	-7	0	-7	0	multi-exon	FALSE	canonical	3	45	junction_2	19.6015872373189	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGCTGCTTGTTTGACC	-5	True	NA	NA	False	ATTAAA	-28	NA	110048688	110172512	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_110048856_110136126_110138540_110156318_110156498_110168398
H1_mix_00086047	chr9	+	6718	3	NIC	ENSG00000157654.19	novel	6866	4	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_2	24.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGCTGCTTGTTTGACC	NA	False	NA	NA	False	ATTAAA	-28	NA	110048664	110172512	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_110048856_110136126_110138540_110168398
H1_mix_00086054	chr9	+	2517	5	FSM	ENSG00000059769.20	ENST00000447096.1	2498	5	-22	3	4	3	multi-exon	FALSE	canonical	3	41	junction_1	26.8456234794426	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTTTGTTGATATGACGT	10	True	NA	NA	False	AATAAA	-18	NA	111631337	111654348	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_111631744_111642856_111643095_111647106_111647260_111649452_111649924_111653099
H1_mix_00086058	chr9	+	2997	9	FSM	ENSG00000119471.15	ENST00000398803.1	2983	9	-14	0	-14	0	multi-exon	FALSE	canonical	2	21	junction_3	45.7902828119679	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAATTTGTTGAGATTTTA	46	False	NA	12	True	AATAAA	-18	NA	112380065	112472405	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_112380181_112403994_112404159_112405623_112405723_112418859_112418959_112438430_112438626_112441698_112441771_112454012_112454163_112459448_112459578_112470431
H1_mix_00086059	chr9	+	3178	11	FSM	ENSG00000119471.15	ENST00000398805.8	3174	11	-4	0	0	0	multi-exon	FALSE	canonical	3	132	junction_7	12.1692234756372	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAATTTGTTGAGATTTTA	2	True	NA	12	True	AATAAA	-18	NA	112380103	112472405	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_112380181_112403994_112404159_112405623_112405723_112408906_112409022_112416840_112416945_112418859_112418959_112438430_112438626_112441698_112441771_112454012_112454163_112459448_112459578_112470431
H1_mix_00086066	chr9	+	4579	4	NIC	ENSG00000136868.11	novel	4762	5	NA	NA	19	0	combination_of_known_splicesites	FALSE	canonical	3	62	junction_1	189.068476719121	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGTCTTTCTGCCCAGA	-2	True	NA	25	True	AATAAA	-22	NA	113221562	113264492	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_113221679_113257112_113257186_113258693_113258863_113260271
H1_mix_00086069	chr9	+	4020	14	FSM	ENSG00000136875.13	ENST00000374199.9	4020	14	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	63.3019438459401	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCTATTAGTTCCCTTC	NA	False	NA	24	True	TTTAAA	-1	NA	113275641	113294009	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_113275771_113276544_113276726_113278944_113279132_113282645_113282734_113283131_113283212_113283388_113283483_113284294_113284390_113286231_113286291_113286704_113286829_113288174_113288265_113290465_113290589_113290699_113290808_113290897_113291017_113291466
H1_mix_00086073	chr9	+	3689	16	FSM	ENSG00000138835.22	ENST00000343817.9	3689	16	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	26.7498701969852	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTTTGTGTGTTCCTGG	59	False	NA	20	True	AATAAA	-27	NA	113501426	113597738	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_113501631_113505441_113505524_113506387_113506494_113507286_113507639_113508540_113508581_113514457_113514655_113517540_113517625_113522929_113523042_113529220_113529265_113536795_113536919_113583449_113584428_113591332_113591398_113594429_113594532_113594918_113594981_113595598_113595766_113596767
H1_mix_00086076	chr9	+	2139	5	FSM	ENSG00000138835.22	ENST00000462403.5	2155	5	7	9	7	0	multi-exon	FALSE	canonical	3	74	junction_1	10.7325439668328	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTGACCCTTTTTGTG	NA	False	NA	11	True	AATAAA	-18	NA	113593492	113597729	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_113594339_113594429_113594532_113594918_113594981_113595598_113595766_113596767
H1_mix_00086077	chr9	+	1284	2	FSM	ENSG00000138835.22	ENST00000490241.1	1265	2	-19	0	-19	0	multi-exon	FALSE	canonical	3	102	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTTTGTGTGTTCCTGG	1155	False	NA	20	True	AATAAA	-27	NA	113595452	113597738	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_113595766_113596767
H1_mix_00086079	chr9	+	9289	14	FSM	ENSG00000157657.15	ENST00000615615.4	9289	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_10	7.47777772893215	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGCAGCGTATGGTGTT	NA	False	NA	12	True	AATAAA	-13	NA	113876281	114056591	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_113876414_113969116_113969161_113988320_113988581_114001995_114002074_114002623_114002663_114007349_114007440_114008343_114008380_114008476_114008555_114016694_114016785_114028732_114028973_114032647_114032729_114036299_114036378_114047892_114047995_114048650
H1_mix_00086088	chr9	+	698	6	FSM	ENSG00000228278.5	ENST00000431067.4	759	6	61	0	61	0	multi-exon	FALSE	canonical	0	0	junction_1	2.82842712474619	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAAGCTGTTAGTCATTTG	61	False	NA	NA	False	AATAAA	-19	NA	114329929	114333251	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_114330019_114330433_114330577_114330791_114330863_114331566_114331675_114331825_114331930_114333068
H1_mix_00086089	chr9	+	978	2	FSM	ENSG00000136888.8	ENST00000677452.1	978	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCATTCTTTTTTTTTTCC	-29	True	NA	24	True	AGTAAA	-20	NA	114587751	114598378	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_114587921_114597569
H1_mix_00086090	chr9	+	1580	3	FSM	ENSG00000136888.8	ENST00000374050.4	1563	3	-17	0	0	0	multi-exon	FALSE	canonical	3	2643	junction_1	63.5	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACTCAGGATTTTATTT	-29	True	NA	21	True	AATACA	-32	NA	114587751	114598879	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_114587921_114592551_114592653_114597569
H1_mix_00086096	chr9	+	3708	2	FSM	ENSG00000119401.11	ENST00000450136.2	3715	2	7	0	7	0	multi-exon	FALSE	canonical	3	47	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTTGTTCTTTTCAT	-17	True	NA	14	True	ATTAAA	-15	NA	116687311	116701299	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_116687382_116697661
H1_mix_00086097	chr9	+	6138	2	FSM	ENSG00000119401.11	ENST00000373983.2	3688	2	-18	-2432	7	2432	multi-exon	FALSE	canonical	3	64	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGTGCAGTGTT	-17	True	NA	NA	False	AATAAA	-1	NA	116687311	116703732	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_116687382_116697664
H1_mix_00086098	chr9	+	1202	1	Intergenic	novelGene_1600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAAGCAGAAAGTATATGC	NA	False	NA	NA	False	AATATA	-13	NA	118486210	118487412	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_118486200_118487400
H1_mix_00086099	chr9	+	249	1	Intergenic	novelGene_1601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACGGGTGGATAGGCAAAAC	NA	False	NA	NA	False	NA	NA	NA	118487975	118488224	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_118488000_118488200
H1_mix_00086100	chr9	+	286	1	Intergenic	novelGene_1602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	252	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTAGCTCGGCCTGACGA	NA	False	NA	NA	False	GATAAA	-42	NA	118489417	118489703	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_118489400_118489700
H1_mix_00086101	chr9	+	2044	2	FSM	ENSG00000214654.9	ENST00000437707.2	3574	2	-26	1556	10	254	multi-exon	FALSE	canonical	3	15	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCACCATCTCTGTTCA	7	True	NA	NA	False	NA	NA	NA	120793476	120800172	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_120793923_120798574
H1_mix_00086103	chr9	+	4645	4	NIC	ENSG00000226752.10	novel	1033	5	NA	NA	567	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	12.0830459735946	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACGATTGATTCTATATT	423	False	NA	NA	False	AATAAA	-30	NA	120843666	120854385	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_120844900_120844992_120845197_120847293_120847354_120851237
H1_mix_00086105	chr9	+	7549	2	FSM	ENSG00000226752.10	ENST00000587916.1	663	2	-3626	-3260	7	154	multi-exon	FALSE	canonical	3	33	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTCTACTTAGCAAACAAA	12	True	NA	NA	False	AGTAAA	-13	NA	120843106	120854539	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_120847354_120851237
H1_mix_00086107	chr9	+	7719	44	FSM	ENSG00000119397.19	ENST00000373855.7	7719	44	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_12	15.6546352276356	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTCTGTCCTCTGACT	-4	True	NA	13	True	AATAAA	-14	NA	121074954	121177610	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_121075068_121080305_121080479_121088295_121088544_121090274_121090406_121094887_121095019_121096421_121096564_121098385_121098573_121107801_121107996_121112458_121112579_121113501_121113725_121115090_121115201_121118345_121118541_121123930_121124085_121125715_121125937_121135805_121135983_121138544_121138680_121140640_121140787_121141380_121141589_121142090_121142271_121143902_121144083_121144842_121144960_121145243_121145386_121146107_121146257_121148671_121148862_121150169_121150484_121152484_121152694_121154720_121154914_121157469_121157601_121157739_121157881_121157982_121158110_121158854_121159020_121160142_121160303_121161855_121161972_121162053_121162272_121164942_121165101_121166106_121166181_121167488_121167678_121168095_121168322_121169610_121169817_121171407_121171549_121173242_121173510_121173674_121173738_121175017_121175225_121177162
H1_mix_00086108	chr9	+	4395	18	NIC	ENSG00000119397.19	novel	3881	19	NA	NA	-655	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_14	11.8496930303487	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTCTGTCCTCTGACT	7175	False	NA	13	True	AATAAA	-14	NA	121151387	121177610	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_121152694_121154720_121154914_121157469_121157601_121157739_121157881_121157982_121158110_121158854_121159020_121160142_121160303_121161855_121161972_121162053_121162272_121164942_121165101_121166106_121166181_121167488_121167678_121168095_121168322_121169610_121169817_121173242_121173510_121173674_121173738_121175017_121175225_121177162
H1_mix_00086110	chr9	+	2692	19	FSM	ENSG00000148180.21	ENST00000373808.8	2664	19	79	-107	-23	2	multi-exon	FALSE	canonical	2	3	junction_2	134.104252793429	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTAGTGTGGCTCGTTTCCT	-30	True	NA	19	True	AATAAA	-20	NA	121268138	121332845	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_121268220_121281469_121281563_121300055_121300127_121301962_121302168_121302910_121303066_121310683_121310846_121312338_121312489_121313933_121314024_121317085_121317219_121318405_121318495_121318664_121318881_121321267_121321402_121324553_121324645_121326511_121326683_121327307_121327483_121328890_121329016_121329237_121329316_121331387_121331449_121332433
H1_mix_00086111	chr9	+	2618	18	FSM	ENSG00000148180.21	ENST00000432226.7	2595	18	-23	0	-23	0	multi-exon	FALSE	canonical	3	291	junction_1	47.2515172492158	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTAGTGTGGCTCGTTT	-30	True	NA	16	True	AATAAA	-17	NA	121268138	121332842	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_121268220_121281469_121281563_121301962_121302168_121302910_121303066_121310683_121310846_121312338_121312489_121313933_121314024_121317085_121317219_121318405_121318495_121318664_121318881_121321267_121321402_121324553_121324645_121326511_121326683_121327307_121327483_121328890_121329016_121329237_121329316_121331387_121331449_121332433
H1_mix_00086112	chr9	+	2640	17	FSM	ENSG00000148180.21	ENST00000373818.8	2657	17	17	0	17	0	multi-exon	FALSE	canonical	3	38	junction_1	97.3986652885962	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTAGTGTGGCTCGTTT	NA	False	NA	16	True	AATAAA	-17	NA	121299809	121332842	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_121300006_121301962_121302168_121302910_121303066_121310683_121310846_121312338_121312489_121313933_121314024_121317085_121317219_121318405_121318495_121318664_121318881_121321267_121321402_121324553_121324645_121326511_121326683_121327307_121327483_121328890_121329016_121329237_121329316_121331387_121331449_121332433
H1_mix_00086114	chr9	+	5514	16	NIC	ENSG00000136848.18	novel	6784	16	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	25.7500809060218	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGACTCGTGTCTCCATT	NA	False	NA	25	True	ATTAAA	-21	NA	121651595	121785530	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_121651900_121678677_121678782_121757012_121757167_121758897_121758997_121759884_121760440_121763504_121763650_121763734_121763880_121766493_121766731_121768431_121768634_121770545_121770725_121772606_121773496_121774259_121774413_121776197_121776392_121781463_121781552_121782330_121782402_121783535
H1_mix_00086115	chr9	+	6445	14	NNC	ENSG00000136848.18	novel	5514	17	NA	NA	-37965	0	intron_retention	FALSE	canonical	3	27	junction_9	17.0043502961472	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCGACTCGTGTCTCCA	9	True	NA	23	True	ATTAAA	-19	NA	121699185	121785528	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_121699459_121757012_121757167_121758897_121758997_121759884_121760440_121763504_121763650_121763734_121763880_121766493_121766731_121768431_121768634_121770545_121770725_121772672_121773496_121774259_121774413_121776197_121776392_121781463_121781552_121782330
H1_mix_00086117	chr9	+	863	5	FSM	ENSG00000148187.18	ENST00000441707.5	858	5	-5	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	65.2859096589762	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGATGGCCTTGCTAAAA	5	True	NA	NA	False	NA	NA	NA	122264881	122285287	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_122264939_122265461_122265781_122270863_122271076_122280442_122280599_122285168
H1_mix_00086118	chr9	+	1189	6	FSM	ENSG00000148187.18	ENST00000373723.9	1176	6	-13	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	55.4422221776869	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTCTGGATTGATGATC	5	True	NA	NA	False	AATAAA	-36	NA	122264881	122323092	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_122264939_122270863_122271076_122280442_122280599_122285168_122285288_122291748_122291841_122322539
H1_mix_00086119	chr9	+	9594	7	FSM	ENSG00000148187.18	ENST00000344641.8	9594	7	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	11.0302614051829	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATAAGTTGGTGATTCTTT	5	True	NA	NA	False	ATTAAA	-21	NA	122264881	122331337	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_122264939_122270863_122271076_122280442_122280599_122285168_122285288_122291748_122291841_122313226_122313387_122322539
H1_mix_00086120	chr9	+	2482	8	NIC	ENSG00000148187.18	novel	1186	9	NA	NA	4	-6	intron_retention	FALSE	canonical	3	21	junction_4	48.4612195050678	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGCAAATGCTGACTTCT	22	True	NA	6	True	AATAAA	-17	NA	122264898	122323455	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_122264939_122270863_122271076_122280442_122280599_122285168_122285947_122286038_122286167_122291748_122291841_122313226_122313387_122322539
H1_mix_00086124	chr9	+	5025	11	FSM	ENSG00000095303.17	ENST00000362012.7	5020	11	-5	0	-5	0	multi-exon	TRUE	canonical	2	6	junction_4	3.53411940941446	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGGTATTTGTGGGGG	-4	True	NA	3	True	AATAAA	-15	NA	122371018	122395703	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_122371092_122371185_122371273_122377898_122378016_122378432_122378574_122378774_122378919_122381370_122381553_122381663_122381748_122383508_122383756_122386445_122386733_122390197_122390346_122392188
H1_mix_00086129	chr9	+	5010	26	FSM	ENSG00000011454.18	ENST00000373647.9	4986	26	-24	0	-24	0	multi-exon	FALSE	canonical	3	165	junction_1	25.3598107248457	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCATTGCTTTGTAAAAAC	9303	False	NA	77	True	ATTAAA	-19	NA	122940995	123104866	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_122941094_122957010_122957210_122984484_122984720_122986214_122986420_122989296_122989472_122990055_122990214_122996040_122996152_122996538_122996606_122997258_122997362_122998596_122998767_123010353_123010529_123015542_123015637_123020308_123020460_123065347_123065462_123070349_123070425_123073551_123073678_123074284_123074429_123076244_123076287_123076633_123076763_123089757_123089851_123090274_123090386_123097740_123097846_123098714_123098799_123099477_123099550_123101565_123101764_123103090
H1_mix_00086130	chr9	+	4977	27	NNC	ENSG00000011454.18	novel	4986	26	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	non_canonical	2	39	junction_26	45.9154741806155	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCATTGCTTTGTAAAAAC	9303	False	NA	77	True	ATTAAA	-19	NA	122940995	123104866	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_122941089_122957010_122957210_122984484_122984720_122986214_122986420_122989296_122989472_122990055_122990214_122996040_122996152_122996538_122996606_122997258_122997362_122998596_122998767_123010353_123010529_123015542_123015637_123020308_123020460_123065347_123065462_123070349_123070425_123073551_123073678_123074284_123074429_123076244_123076287_123076633_123076763_123089757_123089851_123090274_123090386_123097740_123097846_123098714_123098799_123099477_123099550_123101565_123101764_123103090_123103589_123103616
H1_mix_00086132	chr9	+	3468	10	FSM	ENSG00000119408.17	ENST00000320246.10	3468	10	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_4	9.19070921107121	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACAGAACCTATCTGTCC	-20	True	NA	NA	False	NA	NA	NA	124257948	124353307	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_124258086_124301935_124302055_124312508_124312650_124313922_124313986_124321458_124321570_124326329_124326439_124327337_124327446_124339570_124339666_124347708_124347823_124350836
H1_mix_00086133	chr9	+	6643	8	FSM	ENSG00000185585.20	ENST00000373580.8	6567	8	23	-99	-2	96	multi-exon	FALSE	canonical	3	19	junction_6	4.71212071499161	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATCCCAGCACTTTGGG	-2	True	NA	NA	False	TTTAAA	-38	NA	124777155	124814981	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_124777361_124786974_124787239_124795023_124795132_124799284_124799492_124801413_124801664_124804093_124804343_124807780_124807967_124809807
H1_mix_00086138	chr9	+	1985	4	FSM	ENSG00000136950.13	ENST00000259477.6	1325	4	-976	316	-976	0	multi-exon	FALSE	canonical	1	406	junction_1	370.945638425183	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTAGTCTATACATTGC	6105	False	NA	13	True	AATAAA	-9	NA	124868228	124877401	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_124869440_124873691_124873765_124874974_124875152_124876877
H1_mix_00086139	chr9	+	6569	3	FSM	ENSG00000136950.13	ENST00000465124.1	1877	3	-4360	-332	-976	0	multi-exon	FALSE	canonical	3	1092	junction_2	86.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGGCTTTAAAAGTCTTC	6105	False	NA	NA	False	AATAAA	-23	NA	124868228	124877733	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_124873765_124874974_124875152_124876877
H1_mix_00086141	chr9	+	1523	8	FSM	ENSG00000136933.17	ENST00000373538.8	1671	8	-7	155	-7	-152	multi-exon	FALSE	canonical	3	156	junction_4	58.2377253424378	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTACTTTCAGAATAGTTA	-1	True	NA	22	True	AATAAA	-23	NA	125200534	125234006	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_125200907_125203007_125203067_125207563_125207722_125213369_125213523_125220538_125220701_125227909_125228060_125232595_125232746_125233687
H1_mix_00086142	chr9	+	1373	9	FSM	ENSG00000136933.17	ENST00000394125.8	1466	9	-7	100	-7	-100	multi-exon	FALSE	canonical	3	67	junction_1	81.8503779771358	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTCTGCATTATATATC	-1	True	NA	13	True	AGTAAA	-27	NA	125200534	125234058	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_125200578_125200779_125200907_125203007_125203067_125207563_125207722_125213369_125213523_125220538_125220701_125227909_125228060_125232595_125232746_125233687
H1_mix_00086143	chr9	+	1444	10	FSM	ENSG00000136933.17	ENST00000628863.2	1537	10	-7	100	-7	-100	multi-exon	FALSE	canonical	3	6	junction_5	121.11406724221	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTCTGCATTATATATC	-1	True	NA	13	True	AGTAAA	-27	NA	125200534	125234058	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_125200578_125200779_125200907_125203007_125203067_125207563_125207722_125213369_125213523_125220326_125220398_125220538_125220701_125227909_125228060_125232595_125232746_125233687
H1_mix_00086145	chr9	+	4952	28	NIC	ENSG00000165219.23	novel	5207	27	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	2	5	junction_14	52.25743493679	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TATAAAAAACAAAACAAAAA	9	True	NA	NA	False	AAAAAG	-28	NA	125261828	125363022	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_125261960_125268935_125268985_125298889_125299107_125301982_125302827_125305062_125305150_125307412_125307548_125307690_125307881_125312451_125312613_125321432_125321563_125323797_125323924_125326415_125326590_125330077_125330219_125331925_125332061_125332509_125332630_125335171_125335253_125337017_125337096_125337220_125337592_125341176_125341265_125342218_125342300_125346818_125346942_125349389_125349520_125350294_125350405_125350712_125350873_125354653_125354842_125355643_125355858_125359419_125359493_125360527_125360726_125362605
H1_mix_00086148	chr9	+	8974	27	NIC	ENSG00000165219.23	novel	9176	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_2	37.1120365169829	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTTTCTGTCATCTA	91	False	NA	23	True	ATTAAA	-27	NA	125261910	125367207	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_125261960_125268935_125268985_125298889_125299107_125301982_125302827_125305062_125305150_125307412_125307548_125307690_125307881_125312451_125312613_125321432_125321563_125323797_125323924_125326415_125326590_125330077_125330219_125331925_125332061_125332509_125332630_125337017_125337096_125337220_125337592_125341176_125341265_125342218_125342300_125346818_125346942_125349389_125349520_125350294_125350405_125350712_125350873_125354653_125354842_125355643_125355858_125359419_125359493_125360527_125360726_125362605
H1_mix_00086150	chr9	+	3739	8	FSM	ENSG00000167081.18	ENST00000342287.9	2755	8	-984	0	-984	0	multi-exon	FALSE	canonical	3	96	junction_6	38.2713192554297	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGATGCAGTTTCTTACT	NA	False	NA	NA	False	AATAAA	-22	NA	125746360	125967377	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_125747654_125748549_125748624_125915685_125915928_125929654_125929846_125935471_125935608_125960683_125960850_125963011_125963102_125965830
H1_mix_00086151	chr9	+	3596	9	FSM	ENSG00000167081.18	ENST00000373489.10	2840	9	-756	0	-728	0	multi-exon	FALSE	canonical	3	93	junction_6	39.9898424603048	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGATGCAGTTTCTTACT	NA	False	NA	NA	False	AATAAA	-22	NA	125746616	125967377	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_125747654_125748549_125748624_125915685_125915928_125929654_125929846_125935471_125935608_125960683_125960850_125962101_125962215_125963011_125963102_125965830
H1_mix_00086155	chr9	+	5370	10	FSM	ENSG00000196814.15	ENST00000361171.8	4838	10	-532	0	-532	0	multi-exon	FALSE	canonical	3	27	junction_7	7.36022007185742	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGTTTGCTGTCGTGGT	NA	False	NA	11	True	AATAAA	-20	NA	126326296	126507040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_126327011_126340507_126340631_126381063_126381172_126386561_126386659_126392065_126392196_126395574_126395698_126421853_126421949_126481368_126481425_126483972_126484033_126503176
H1_mix_00086156	chr9	+	6266	8	FSM	ENSG00000136944.19	ENST00000526117.6	6291	8	25	0	25	0	multi-exon	FALSE	canonical	0	0	junction_2	1.91662969499982	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGTCTTCTCCTTGGTG	18	False	NA	7	True	AATAAA	-16	NA	126613952	126701032	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_126614589_126615382_126615570_126690835_126691069_126693141_126693324_126693523_126693602_126693745_126693813_126695838_126695983_126696293
H1_mix_00086157	chr9	+	5987	3	FSM	ENSG00000169155.10	ENST00000373464.5	5940	3	-47	0	-13	0	multi-exon	FALSE	canonical	3	49	junction_2	1.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTTTTCACTATGAG	NA	False	NA	18	True	AATAAA	-24	NA	126804992	126838210	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_126805133_126808792_126808916_126832486
H1_mix_00086158	chr9	+	5864	2	FSM	ENSG00000169155.10	ENST00000449886.5	5851	2	-13	0	-13	0	multi-exon	FALSE	canonical	3	19	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTTTTCACTATGAG	NA	False	NA	18	True	AATAAA	-24	NA	126804992	126838210	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_126805133_126832486
H1_mix_00086159	chr9	+	6616	1	FSM	ENSG00000169155.10	ENST00000373457.1	5695	1	186	-1107	186	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTTTTCACTATGAG	5112	False	NA	18	True	AATAAA	-24	NA	126831594	126838210	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_126831600_126838200
H1_mix_00086160	chr9	+	6596	2	FSM	ENSG00000177125.5	ENST00000319119.4	6564	2	-34	2	-34	1	multi-exon	FALSE	canonical	3	162	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGCTGTGGTCTCCCTC	-21	True	NA	31	True	AATAAA	-45	NA	126860630	126885876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_126860740_126879389
H1_mix_00086161	chr9	+	2370	18	FSM	ENSG00000136828.19	ENST00000424082.6	2362	18	-8	0	-8	0	multi-exon	TRUE	canonical	3	38	junction_17	25.6624346785962	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAACATCGCAGTGACT	-35	True	NA	113	True	AAGAAA	-28	NA	126914765	127217445	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_126915013_126962224_126962347_126965843_126965952_126977694_126977746_127034430_127034515_127050042_127050133_127052846_127052940_127069229_127069357_127166068_127166207_127168678_127168773_127174714_127174783_127195090_127195218_127210694_127210779_127212130_127212237_127212626_127212720_127212943_127213050_127214750_127214843_127216905
H1_mix_00086162	chr9	+	2461	20	NIC	ENSG00000136828.19	novel	6330	19	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	32	junction_14	32.1224285431918	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTCAACAGCAGAGGATGA	-17	True	NA	12	True	AATAAA	-20	NA	126914783	127217344	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_126915013_126962224_126962347_126965843_126965952_126977694_126977746_127034430_127034515_127050042_127050133_127052846_127052940_127069229_127069357_127166068_127166207_127168678_127168773_127174714_127174783_127195090_127195218_127196473_127196632_127199014_127199067_127210694_127210779_127212130_127212237_127212626_127212720_127212943_127213050_127214750_127214843_127216905
H1_mix_00086163	chr9	+	6196	18	NIC	ENSG00000136828.19	novel	2362	18	NA	NA	-2	-43	combination_of_known_junctions	FALSE	canonical	3	52	junction_17	23.9315633251025	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATCTTTGTTTACTTTGA	-17	True	NA	6	True	ATTAAA	-15	NA	126914783	127223123	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_126915013_126962224_126962347_126965843_126965952_126977694_126977746_127034430_127034515_127050042_127050133_127052846_127052940_127069229_127069357_127166068_127166207_127168678_127168773_127174714_127174783_127195090_127195218_127210694_127210779_127212130_127212237_127212626_127212720_127212943_127213050_127214750_127214843_127218739
H1_mix_00086170	chr9	+	3320	28	FSM	ENSG00000136895.19	ENST00000373387.9	3552	28	178	54	29	-54	multi-exon	FALSE	canonical	2	6	junction_27	11.3439795070443	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTCACATAATGTGTTTC	1	True	NA	NA	False	NA	NA	NA	127264951	127393606	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127265022_127291167_127291243_127311635_127311736_127313440_127313560_127318062_127318128_127320714_127320779_127325068_127325096_127332273_127332350_127333022_127333122_127335229_127335334_127336127_127336237_127338115_127338162_127339644_127339752_127342218_127342335_127344234_127344340_127345402_127345478_127348923_127349036_127353845_127353945_127354293_127354411_127355296_127355473_127357218_127357378_127365299_127365367_127383437_127383546_127385026_127385146_127387192_127387332_127388903_127389120_127390640_127390768_127393082
H1_mix_00086171	chr9	+	4837	7	FSM	ENSG00000136895.19	ENST00000481242.5	4816	7	-21	0	-21	0	multi-exon	FALSE	canonical	2	6	junction_6	2.3392781412697	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACTGCAACCTTCTCAT	NA	False	NA	NA	False	AATAAA	-19	NA	127361694	127393538	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127365367_127383437_127383546_127385026_127385146_127387192_127387332_127388903_127389120_127390640_127390768_127393082
H1_mix_00086173	chr9	+	1605	9	NIC	ENSG00000136856.18	novel	2145	10	NA	NA	7	-121	combination_of_known_junctions	FALSE	canonical	3	18	junction_4	67.5267308182471	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCTCTAGGATCTTTGT	5	True	NA	NA	False	ACTAAA	-17	NA	127397144	127407531	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_127397287_127397375_127397539_127397904_127398112_127399906_127400007_127403659_127403804_127403958_127404068_127404817_127404992_127405419_127405566_127407111
H1_mix_00086174	chr9	+	1756	8	FSM	ENSG00000136856.18	ENST00000610552.4	1763	8	7	0	7	0	multi-exon	TRUE	canonical	3	42	junction_1	63.4211707394241	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAACAGCAAAAAA	5	True	NA	NA	False	NA	NA	NA	127397144	127407855	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127397287_127399906_127400007_127402556_127402754_127403659_127403804_127403958_127404068_127404817_127404992_127405419_127405566_127407111
H1_mix_00086175	chr9	+	2169	10	FSM	ENSG00000136856.18	ENST00000373371.8	2145	10	-24	0	7	0	multi-exon	FALSE	canonical	3	122	junction_2	40.6241429159351	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTTTGTTCTGTTGACT	5	True	NA	NA	False	AATAAA	-34	NA	127397144	127407898	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127397287_127397375_127397539_127397904_127398112_127399906_127400007_127402556_127402754_127403659_127403804_127403958_127404068_127404817_127404992_127405419_127405566_127407111
H1_mix_00086178	chr9	+	1524	10	NIC	ENSG00000136856.18	novel	2145	10	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_9	63.0281144401175	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGACACAGAAAATCAGGTC	12	True	NA	12	True	AATAAA	-3	NA	127397219	127407652	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_127397287_127397375_127397539_127397904_127398112_127399906_127400007_127402556_127402754_127403659_127403804_127403958_127404068_127404817_127404992_127405419_127405566_127407435
H1_mix_00086180	chr9	+	1188	8	NNC	ENSG00000136856.18	novel	2145	10	NA	NA	54	-121	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	93.491678119237	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCTCTAGGATCTTTGT	120	False	NA	NA	False	ACTAAA	-17	NA	127397437	127407531	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_127397539_127398039_127398112_127399906_127400007_127403737_127403804_127403958_127404068_127404817_127404992_127405419_127405566_127407111
H1_mix_00086184	chr9	+	2160	5	FSM	ENSG00000196152.10	ENST00000612342.4	2192	5	32	0	24	0	multi-exon	FALSE	canonical	3	8	junction_1	8.13557004763649	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGACGCTCAGCTCTCC	-9	True	NA	15	True	AATAAA	-23	NA	127424405	127445371	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127424911_127428831_127428921_127435089_127435217_127435907_127436004_127444028
H1_mix_00086185	chr9	+	3471	5	FSM	ENSG00000196152.10	ENST00000342483.5	2078	5	24	-1417	24	1417	multi-exon	FALSE	canonical	2	12	junction_1	6.83282518435822	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGTACCCAGAATCCTCT	-9	True	NA	NA	False	NA	NA	NA	127424405	127446789	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127424804_127428831_127428921_127435089_127435217_127435907_127436004_127444028
H1_mix_00086186	chr9	+	3125	26	FSM	ENSG00000148356.15	ENST00000300417.11	3120	26	-5	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	19.7251514569597	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGCCTGAGTCATCAC	-12	True	NA	24	True	AATAAA	-16	NA	127451504	127503499	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127451670_127451928_127452085_127454495_127454600_127454997_127455055_127455575_127455621_127457315_127457394_127459002_127459072_127461172_127461258_127462251_127462374_127467739_127467831_127473800_127473932_127478933_127478964_127479382_127479506_127479838_127479979_127481182_127481228_127482949_127483021_127485735_127485836_127487675_127487764_127489443_127489519_127491214_127491296_127492801_127492898_127495319_127495419_127495963_127496096_127497252_127497335_127501009_127501144_127502773
H1_mix_00086187	chr9	+	3398	25	FSM	ENSG00000148356.15	ENST00000323301.8	3376	25	-22	0	2	0	multi-exon	FALSE	canonical	3	125	junction_5	17.6729057379431	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGCCTGAGTCATCAC	5	False	NA	24	True	AATAAA	-16	NA	127451490	127503499	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127452085_127454495_127454600_127454997_127455055_127455575_127455621_127457315_127457394_127459002_127459072_127461172_127461258_127462251_127462374_127467739_127467831_127473800_127473932_127478933_127478964_127479382_127479506_127479838_127479979_127481182_127481228_127482949_127483021_127485735_127485836_127487675_127487764_127489443_127489519_127491214_127491296_127492801_127492898_127495319_127495419_127495963_127496096_127497252_127497335_127501009_127501144_127502773
H1_mix_00086188	chr9	+	983	2	FSM	ENSG00000148356.15	ENST00000486587.2	985	2	0	2	0	-2	multi-exon	FALSE	canonical	3	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATAGAAAGACGCAGCCC	111	False	NA	NA	False	NA	NA	NA	127451666	127454043	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127452085_127453478
H1_mix_00086191	chr9	+	2663	19	FSM	ENSG00000148356.15	ENST00000676399.1	2663	19	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_10	36.7591846253557	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTCAGTGCGCTTCTGGC	1718	False	NA	12	True	AATAAA	-4	NA	127460953	127503487	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127461258_127462251_127462374_127467739_127467831_127473800_127473932_127478933_127478964_127479382_127479506_127479838_127479979_127481182_127481228_127482949_127483021_127485735_127485841_127487675_127487764_127489443_127489519_127491214_127491296_127492801_127492898_127495319_127495419_127495963_127496096_127497252_127497335_127501009_127501144_127502773
H1_mix_00086194	chr9	+	3948	20	FSM	ENSG00000136854.24	ENST00000637953.1	3925	20	-23	0	-23	0	multi-exon	FALSE	canonical	0	0	junction_18	53.9020348677198	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGGCAACGGAAGGAGAAAG	254	False	NA	46	True	GGGGCT	-18	NA	127612198	127692735	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127612441_127651602_127651653_127653714_127653797_127658374_127658452_127660029_127660109_127661101_127661206_127663204_127663354_127665246_127665332_127666165_127666297_127668079_127668188_127669897_127669959_127672050_127672117_127673180_127673262_127675803_127675943_127676643_127676754_127678430_127678533_127680156_127680243_127682405_127682561_127686457_127686538_127690774
H1_mix_00086195	chr9	+	2941	19	FSM	ENSG00000136854.24	ENST00000636962.2	2918	19	-23	0	-23	0	multi-exon	FALSE	canonical	2	2	junction_18	42.8709303219171	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATTCTGATTGTGGTTA	254	False	NA	13	True	AATAAA	-25	NA	127612198	127696027	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127612441_127651602_127651653_127653714_127653797_127658374_127658452_127660029_127660109_127661101_127661206_127663204_127663354_127665246_127665332_127666165_127666297_127668079_127668188_127669897_127669959_127672050_127672117_127673180_127673262_127675803_127675943_127676643_127676754_127678430_127678533_127680156_127680243_127682405_127682561_127694993
H1_mix_00086196	chr9	+	3754	19	FSM	ENSG00000136854.24	ENST00000373299.5	3754	19	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_8	23.3679637194827	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGGTGTCCAGGGGGCTC	6	True	NA	10	True	AATAAA	-20	NA	127612276	127692699	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127612441_127651602_127651653_127653714_127653797_127658374_127658452_127660029_127660109_127661101_127661206_127663204_127663354_127665246_127665332_127666165_127666297_127668079_127668188_127669897_127669959_127672050_127672117_127673180_127673262_127675803_127675943_127676643_127676754_127678430_127678533_127680156_127680243_127682405_127682561_127690774
H1_mix_00086200	chr9	+	2483	7	FSM	ENSG00000136807.14	ENST00000373264.5	2483	7	0	0	0	0	multi-exon	FALSE	canonical	3	744	junction_5	66.2354805892498	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTTTGGAG	-27	True	NA	NA	False	AGTAAA	-16	NA	127786033	127790792	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127786241_127786700_127786783_127787517_127787609_127787946_127788114_127788213_127788386_127788543_127788693_127789177
H1_mix_00086204	chr9	+	2169	14	FSM	ENSG00000136877.15	ENST00000630236.2	2160	14	-9	0	-9	0	multi-exon	FALSE	canonical	3	11	junction_9	168.503156081622	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGACCCCCTGCTCCCT	NA	False	NA	28	True	ATTAAA	-40	NA	127802848	127814081	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127803063_127804284_127804414_127804498_127804553_127804635_127804701_127806972_127807088_127807208_127807287_127807420_127807483_127807585_127807689_127808233_127808312_127808799_127808890_127809683_127809835_127810030_127810107_127810944_127811012_127813194
H1_mix_00086205	chr9	+	2288	15	FSM	ENSG00000136877.15	ENST00000373247.7	2284	15	-16	12	8	10	multi-exon	FALSE	canonical	3	555	junction_1	36.5150234667254	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCGACTGACCCTTGAC	NA	False	NA	16	True	ATTAAA	-28	NA	127802865	127814069	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127803063_127804284_127804414_127804498_127804553_127804635_127804701_127806972_127807088_127807208_127807287_127807420_127807483_127807585_127807689_127808233_127808312_127808557_127808706_127808799_127808890_127809683_127809835_127810030_127810107_127810944_127811012_127813194
H1_mix_00086206	chr9	+	2213	15	FSM	ENSG00000136877.15	ENST00000460181.5	2206	15	-7	0	0	0	multi-exon	FALSE	canonical	2	26	junction_4	157.493051353035	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGGCAAAGCCTTCGAC	9	True	NA	5	True	ATTAAA	-17	NA	127802910	127814058	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127803063_127804284_127804414_127804498_127804553_127804635_127804701_127806991_127807088_127807208_127807287_127807420_127807483_127807585_127807689_127808233_127808312_127808557_127808706_127808799_127808890_127809683_127809835_127810030_127810107_127810944_127811012_127813194
H1_mix_00086207	chr9	+	2281	15	FSM	ENSG00000136877.15	ENST00000373225.7	2278	15	-3	0	-3	0	multi-exon	FALSE	canonical	3	78	junction_1	145.416239303116	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGCAAAGCCTTCGACT	217	False	NA	6	True	ATTAAA	-18	NA	127803204	127814059	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127803405_127804284_127804414_127804498_127804553_127804635_127804701_127806972_127807088_127807208_127807287_127807420_127807483_127807585_127807689_127808233_127808312_127808557_127808706_127808799_127808890_127809683_127809835_127810030_127810107_127810944_127811012_127813194
H1_mix_00086208	chr9	+	3441	10	FSM	ENSG00000148339.13	ENST00000373068.6	3431	10	-10	0	-10	0	multi-exon	FALSE	canonical	3	61	junction_1	11.5030860056909	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATGGAGCCAGTATTTTT	-17	True	NA	11	True	AATAAA	-16	NA	128068190	128109244	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128068581_128101095_128101223_128101308_128101397_128102369_128102482_128103680_128103840_128105728_128105882_128106149_128106258_128106352_128106521_128107028_128107180_128107259
H1_mix_00086209	chr9	+	3304	10	FSM	ENSG00000148339.13	ENST00000373064.9	3474	10	170	0	-63	0	multi-exon	FALSE	canonical	3	15	junction_1	22.4438943826986	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGAGCCAGTATTTTTC	-9	True	NA	12	True	AATAAA	-17	NA	128098473	128109245	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128098726_128101095_128101223_128101308_128101397_128102369_128102482_128103680_128103840_128105728_128105882_128106149_128106258_128106352_128106521_128107028_128107180_128107259
H1_mix_00086213	chr9	+	1712	3	FSM	ENSG00000171159.5	ENST00000492588.1	1570	3	-108	-34	-59	0	multi-exon	FALSE	canonical	3	31	junction_1	10	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCTGTGCCTCTCTCCTCT	6787	False	NA	14	True	ATTAAA	-14	NA	128160205	128163924	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128160487_128162003_128162953_128163442
H1_mix_00086214	chr9	+	704	2	FSM	ENSG00000171159.5	ENST00000372994.2	704	2	0	0	0	0	multi-exon	FALSE	canonical	3	1037	junction_1	0	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCTGTGCCTCTCTCCTCT	-5	True	NA	14	True	ATTAAA	-14	NA	128160264	128163924	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128160487_128163442
H1_mix_00086217	chr9	+	3855	21	FSM	ENSG00000106976.21	ENST00000628346.2	3835	21	-20	0	-2	0	multi-exon	FALSE	canonical	1	12	junction_9	138.31878939609	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCCTCTGCTGGTTGTG	-3	True	NA	23	True	AATAAA	-24	NA	128203376	128255244	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128203632_128218230_128218305_128218581_128218732_128219048_128219253_128219987_128220087_128220180_128220342_128222196_128222340_128222460_128222597_128222792_128222861_128224250_128224390_128234020_128234108_128239444_128239516_128239727_128239780_128242231_128242346_128246393_128246504_128247374_128247487_128247923_128247936_128248582_128248754_128250114_128250357_128250724_128250941_128254005
H1_mix_00086218	chr9	+	4754	22	FSM	ENSG00000106976.21	ENST00000627543.2	4734	22	-20	0	0	0	multi-exon	FALSE	canonical	1	12	junction_9	134.850702697986	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCTCTGCTGGTTGTGTT	17	False	NA	25	True	AATAAA	-26	NA	128203396	128255246	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128203632_128218230_128218305_128218581_128218732_128219048_128219253_128219987_128220087_128220180_128220342_128222196_128222340_128222460_128222597_128222792_128222861_128224250_128224390_128234020_128234108_128239444_128239516_128239727_128239780_128239984_128239997_128242231_128242346_128246393_128246504_128247374_128247487_128247923_128247936_128248582_128248754_128250114_128250357_128250724_128250941_128253100
H1_mix_00086219	chr9	+	3600	12	NIC	ENSG00000106976.21	novel	3254	23	NA	NA	339	-3	combination_of_known_splicesites	FALSE	canonical	3	33	junction_3	118.765133876881	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTCTCCTCTGCTGGTT	NA	False	NA	20	True	AATAAA	-21	NA	128232974	128255241	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_128234108_128239444_128239516_128239727_128239780_128240426_128240533_128242231_128242346_128246393_128246504_128247374_128247487_128248582_128248754_128250114_128250357_128250724_128250941_128253100_128253138_128254005
H1_mix_00086220	chr9	+	2848	11	NIC	ENSG00000106976.21	novel	3254	23	NA	NA	339	-1	combination_of_known_splicesites	FALSE	canonical	3	9	junction_10	125.296647999857	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCTCCTCTGCTGGTTGT	NA	False	NA	22	True	AATAAA	-23	NA	128232974	128255243	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_128234108_128239444_128239516_128239727_128239780_128242231_128242346_128246393_128246504_128247374_128247487_128248582_128248754_128250114_128250357_128250724_128250941_128253100_128253138_128254653
H1_mix_00086222	chr9	+	5263	12	NIC	ENSG00000106976.21	novel	3254	23	NA	NA	-1415	0	intron_retention	FALSE	canonical	3	125	junction_3	76.5721180077863	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCCTCTGCTGGTTGTG	8677	False	NA	23	True	AATAAA	-24	NA	128231220	128255244	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_128234108_128239444_128239516_128239727_128239780_128242231_128242346_128246393_128246504_128247374_128247487_128247923_128247936_128248582_128248754_128250114_128250357_128250724_128250941_128253100_128253138_128254005
H1_mix_00086224	chr9	+	2958	12	NIC	ENSG00000106976.21	novel	3217	22	NA	NA	-66	0	combination_of_known_splicesites	FALSE	canonical	3	55	junction_11	106.576011752137	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCCTCTGCTGGTTGTG	NA	False	NA	23	True	AATAAA	-24	NA	128233497	128255244	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_128234108_128239444_128239516_128239727_128239780_128239984_128239997_128242231_128242346_128246393_128246504_128247374_128247487_128247923_128247936_128248582_128248754_128250114_128250357_128250724_128250941_128254008
H1_mix_00086226	chr9	+	781	5	FSM	ENSG00000175854.14	ENST00000418976.2	763	5	-18	0	4	0	multi-exon	FALSE	canonical	3	175	junction_1	24.963723680573	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTCTTCTCCAATAGCC	861	False	NA	17	True	AATAAA	-17	NA	128276225	128288989	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128276403_128276706_128276756_128284509_128284632_128285938_128286034_128288651
H1_mix_00086227	chr9	+	902	5	FSM	ENSG00000175854.14	ENST00000608796.6	906	5	4	0	4	0	multi-exon	FALSE	canonical	3	27	junction_1	86.9522138878591	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCTTCTCCAATAGCCC	861	False	NA	18	True	AATAAA	-18	NA	128276225	128288990	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128276403_128276586_128276756_128284509_128284632_128285938_128286034_128288651
H1_mix_00086229	chr9	+	890	3	FSM	ENSG00000167113.11	ENST00000608951.5	781	3	-109	0	-71	0	multi-exon	FALSE	canonical	0	0	junction_1	21	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTAGGGTTCTACAGTG	-17	True	NA	20	True	AATAAA	-25	NA	128322472	128323584	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128322929_128323015_128323148_128323282
H1_mix_00086230	chr9	+	956	2	FSM	ENSG00000167113.11	ENST00000609948.1	956	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGGGTTCTACAGTGTT	54	False	NA	22	True	AATAAA	-27	NA	128322543	128323586	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128322929_128323015
H1_mix_00086231	chr9	+	1245	7	FSM	ENSG00000167113.11	ENST00000300452.8	1245	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	94.1541289588513	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCTGCTTGTCCTCCTTT	0	True	NA	24	True	AATAAA	-18	NA	128322838	128334072	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128322929_128323015_128323148_128325142_128325240_128325778_128325882_128332152_128332283_128332849_128332944_128333473
H1_mix_00086232	chr9	+	3081	2	FSM	ENSG00000167113.11	ENST00000461102.1	3127	2	46	0	46	0	multi-exon	FALSE	canonical	3	238	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGTGTCTGCTTGTCCTC	7406	False	NA	20	True	AATAAA	-14	NA	128330457	128334068	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128332944_128333473
H1_mix_00086233	chr9	+	3229	13	FSM	ENSG00000167114.13	ENST00000300456.5	3229	13	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_3	12.4621649626201	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTCACTCTAAGTGTG	3	True	NA	7	True	NA	NA	NA	128340526	128361470	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128340839_128343126_128343294_128345154_128345550_128348544_128348704_128350311_128350382_128350483_128350576_128352637_128352748_128353024_128353235_128353414_128353542_128355052_128355191_128355397_128355563_128355649_128355797_128360333
H1_mix_00086235	chr9	+	1403	5	FSM	ENSG00000167118.11	ENST00000470840.5	723	5	-36	-644	-36	0	multi-exon	FALSE	canonical	3	75	junction_1	210.979264383967	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGCTTGGAGCTTCATC	NA	False	NA	18	True	AATAAA	-19	NA	128371324	128390734	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128371416_128377994_128378107_128387815_128387898_128389260_128389310_128389665
H1_mix_00086237	chr9	+	3066	3	FSM	ENSG00000167118.11	ENST00000372850.5	3045	3	-21	0	-21	0	multi-exon	FALSE	canonical	3	532	junction_1	46	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGCTTGGAGCTTCATC	NA	False	NA	18	True	AATAAA	-19	NA	128371339	128390734	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128371416_128378035_128378107_128387815
H1_mix_00086238	chr9	+	2600	5	FSM	ENSG00000167118.11	ENST00000372853.9	2595	5	-13	8	0	-8	multi-exon	FALSE	canonical	3	488	junction_4	49.3931928508373	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCGAAGATTTTTCTTTA	-2	True	NA	9	True	AATAAA	-18	NA	128371360	128392008	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128371416_128378035_128378107_128387815_128387898_128389260_128389310_128389665
H1_mix_00086239	chr9	+	2646	13	FSM	ENSG00000167123.20	ENST00000372838.9	2308	13	-341	3	35	-3	multi-exon	TRUE	canonical	3	31	junction_5	6.17960354715414	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATATATATGTATGTAT	72	False	NA	NA	False	AATAAA	-16	NA	128420515	128437344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128421075_128422867_128422979_128423145_128423264_128424137_128424273_128424409_128424615_128428301_128428422_128428756_128428834_128428929_128429037_128431170_128431304_128434101_128434230_128434409_128434614_128435652_128435906_128436848
H1_mix_00086241	chr9	+	2211	16	FSM	ENSG00000136811.17	ENST00000372814.7	2249	16	38	0	3	0	multi-exon	FALSE	canonical	3	11	junction_2	22.790836365132	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGTTTGCACAAAGTGA	13	False	NA	9	True	AATAAA	-20	NA	128456094	128494839	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128456256_128459566_128459658_128460941_128461068_128469182_128469354_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509
H1_mix_00086242	chr9	+	3810	21	FSM	ENSG00000136811.17	ENST00000444119.7	3791	21	13	-32	3	0	multi-exon	FALSE	canonical	3	40	junction_4	15.6501597435937	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTCGTACTGTGCTA	13	False	NA	34	True	NA	NA	NA	128456094	128501292	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128456256_128459566_128459658_128460512_128460667_128460941_128461068_128469182_128469354_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509_128494669_128496040_128496142_128498412_128498576_128499000_128499127_128500066
H1_mix_00086245	chr9	+	2244	17	ISM	ENSG00000136811.17	ENST00000372807.10	2780	21	28	5516	19	-24	5prime_fragment	FALSE	canonical	3	40	junction_4	16.1516253052131	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAAATAAAAGTCTGGTG	36	False	NA	-21	True	TTTAAA	-23	NA	128456185	128494809	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_128456256_128459566_128459658_128460512_128460667_128460941_128461068_128469182_128469354_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509
H1_mix_00086246	chr9	+	3331	17	FSM	ENSG00000119392.16	ENST00000683748.1	3373	17	42	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	35.3816248213674	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTTGGTTTTTTGAAAAA	-24	True	NA	12	True	NA	NA	NA	128504696	128542268	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128504905_128508875_128509098_128515528_128515640_128522667_128522817_128523279_128523341_128523591_128523847_128525191_128525424_128527178_128527292_128527455_128527526_128532664_128532692_128533512_128533656_128533760_128533952_128536354_128536485_128537985_128538091_128539615_128539699_128540274_128540339_128541101
H1_mix_00086247	chr9	+	3324	16	FSM	ENSG00000119392.16	ENST00000309971.9	3302	16	-22	0	0	0	multi-exon	FALSE	canonical	3	92	junction_4	9.19903376568552	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTGCTGATATATTGGT	-24	True	NA	32	True	AATAAA	-19	NA	128504696	128542288	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128504905_128508875_128509098_128515528_128515640_128522667_128522817_128523279_128523341_128523591_128523847_128525191_128525424_128527178_128527292_128527455_128527526_128533512_128533656_128533760_128533952_128536354_128536485_128537985_128538091_128539615_128539699_128540274_128540339_128541101
H1_mix_00086248	chr9	+	3795	17	FSM	ENSG00000119392.16	ENST00000683288.1	3600	17	-40	-155	0	116	multi-exon	FALSE	canonical	3	15	junction_2	31.4010723343965	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAGACCCCCATGTCTAA	-24	True	NA	NA	False	NA	NA	NA	128504696	128542634	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128504905_128507215_128507341_128508875_128509098_128515528_128515640_128522667_128522817_128523279_128523341_128523591_128523847_128525191_128525424_128527178_128527292_128527455_128527526_128533512_128533656_128533760_128533952_128536354_128536485_128537985_128538091_128539615_128539699_128540274_128540339_128541101
H1_mix_00086249	chr9	+	7950	56	FSM	ENSG00000197694.18	ENST00000372731.8	7889	56	-77	16	-77	0	multi-exon	FALSE	canonical	0	0	junction_4	144.762337004057	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGACTTCCCCCAAAGCTT	NA	False	NA	-9	True	AATAAA	-2	NA	128552480	128633646	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128552697_128566737_128566978_128568771_128568898_128574674_128574816_128575198_128575346_128576822_128576957_128577128_128577274_128577351_128577507_128578109_128578246_128579636_128579739_128580921_128581060_128581781_128581893_128582478_128582557_128582693_128582850_128583076_128583282_128583787_128583970_128584281_128584526_128584720_128584844_128585747_128585966_128587605_128587699_128588808_128588944_128591476_128591626_128592982_128593043_128594174_128594374_128598399_128598505_128598962_128598987_128600079_128600116_128603542_128603591_128604325_128604418_128605033_128605179_128605295_128605478_128607603_128607704_128607851_128608050_128608129_128608277_128608873_128608978_128609121_128609285_128611713_128611846_128612108_128612247_128613380_128613486_128615631_128615841_128617639_128617761_128617986_128618109_128618870_128619004_128621157_128621257_128624327_128624488_128625102_128625180_128625768_128625979_128626390_128626688_128627385_128627499_128627924_128627943_128630320_128630376_128632126_128632324_128632430_128632485_128632571_128632719_128632807_128632956_128633208
H1_mix_00086250	chr9	+	7812	56	FSM	ENSG00000197694.18	ENST00000630804.2	7812	56	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	133.393860366477	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTTTGCTTTTCTTCAT	-3	True	NA	4	True	AATAAA	-15	NA	128552586	128633659	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128552697_128566737_128566978_128568771_128568898_128574674_128574816_128575198_128575346_128576822_128576957_128577128_128577274_128577351_128577507_128578109_128578246_128579636_128579739_128580921_128581060_128581781_128581893_128582478_128582557_128582693_128582850_128583076_128583282_128583787_128583970_128584281_128584526_128584720_128584844_128585747_128585966_128587605_128587699_128588808_128588944_128591476_128591626_128594174_128594374_128598399_128598505_128598962_128598987_128600079_128600116_128603542_128603591_128604325_128604418_128605033_128605179_128605295_128605478_128607603_128607704_128607851_128608050_128608129_128608277_128608873_128608978_128609121_128609285_128609650_128609666_128611713_128611846_128612108_128612247_128613380_128613486_128615631_128615841_128617639_128617761_128617986_128618109_128618870_128619004_128621157_128621257_128624327_128624488_128625102_128625180_128625768_128625979_128626390_128626688_128627385_128627499_128627924_128627943_128630320_128630376_128632126_128632324_128632430_128632485_128632571_128632719_128632807_128632956_128633208
H1_mix_00086251	chr9	+	7850	55	FSM	ENSG00000197694.18	ENST00000358161.9	7794	55	-72	16	-37	0	multi-exon	FALSE	canonical	0	0	junction_4	133.8481790986	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGACTTCCCCCAAAGCTT	NA	False	NA	-9	True	AATAAA	-2	NA	128552520	128633646	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128552697_128566737_128566978_128568771_128568898_128574674_128574816_128575198_128575346_128576822_128576957_128577128_128577274_128577351_128577507_128578109_128578246_128579636_128579739_128580921_128581060_128581781_128581893_128582478_128582557_128582693_128582850_128583076_128583282_128583787_128583970_128584281_128584526_128584720_128584844_128585747_128585966_128587605_128587699_128588808_128588944_128591476_128591626_128594174_128594374_128598399_128598505_128598962_128598987_128600079_128600116_128603542_128603591_128604325_128604418_128605033_128605179_128605295_128605478_128607603_128607704_128607851_128608050_128608129_128608277_128608873_128608978_128609121_128609285_128611713_128611846_128612108_128612247_128613380_128613486_128615631_128615841_128617639_128617761_128617986_128618109_128618870_128619004_128621157_128621257_128624327_128624488_128625102_128625180_128625768_128625979_128626390_128626688_128627385_128627499_128627924_128627943_128630320_128630376_128632126_128632324_128632430_128632485_128632571_128632719_128632807_128632956_128633208
H1_mix_00086252	chr9	+	7875	57	FSM	ENSG00000197694.18	ENST00000372739.7	7875	57	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	144.03542648124	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGCTTTTCTTCATTTG	-3	True	NA	7	True	AATAAA	-18	NA	128552586	128633662	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128552697_128566737_128566978_128568771_128568898_128574674_128574816_128575198_128575346_128576822_128576957_128577128_128577274_128577351_128577507_128578109_128578246_128579636_128579739_128580921_128581060_128581781_128581893_128582478_128582557_128582693_128582850_128583076_128583282_128583787_128583970_128584281_128584526_128584720_128584844_128585747_128585966_128587605_128587699_128588808_128588944_128591476_128591626_128592982_128593043_128594174_128594374_128598399_128598505_128598962_128598987_128600079_128600116_128603542_128603591_128604325_128604418_128605033_128605179_128605295_128605478_128607603_128607704_128607851_128608050_128608129_128608277_128608873_128608978_128609121_128609285_128609650_128609666_128611713_128611846_128612108_128612247_128613380_128613486_128615631_128615841_128617639_128617761_128617986_128618109_128618870_128619004_128621157_128621257_128624327_128624488_128625102_128625180_128625768_128625979_128626390_128626688_128627385_128627499_128627924_128627943_128630320_128630376_128632126_128632324_128632430_128632485_128632571_128632719_128632807_128632956_128633208
H1_mix_00086253	chr9	+	7770	54	NIC	ENSG00000197694.18	novel	7794	55	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	141.423566400722	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGCTTTTCTTCATTTG	9	False	NA	7	True	AATAAA	-18	NA	128552598	128633662	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_128552697_128566737_128566978_128568771_128568898_128574674_128574816_128575198_128575346_128576822_128576957_128577128_128577274_128577351_128577507_128578109_128578246_128579636_128579739_128580921_128581060_128581781_128581893_128582478_128582557_128582693_128582850_128583076_128583282_128583787_128583970_128584281_128584526_128584720_128584844_128585747_128585966_128587605_128587699_128588808_128588944_128591476_128591626_128594174_128594374_128598399_128598505_128598962_128598987_128600079_128600116_128603542_128603591_128604325_128604418_128605033_128605179_128605295_128605478_128607603_128607704_128607851_128608050_128608129_128608277_128608873_128608978_128609121_128609285_128611713_128611846_128612108_128612247_128613380_128613486_128615631_128615841_128617639_128617761_128617986_128618109_128618870_128619004_128621157_128621257_128624327_128624488_128625102_128625180_128625768_128625979_128626390_128626688_128627385_128627499_128630320_128630376_128632126_128632324_128632430_128632485_128632571_128632719_128632807_128632956_128633208
H1_mix_00086254	chr9	+	7782	55	NIC	ENSG00000197694.18	novel	7875	57	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	140.633961686707	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGCTTTTCTTCATTTG	12	False	NA	7	True	AATAAA	-18	NA	128552601	128633662	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_128552697_128566737_128566978_128568771_128568898_128574674_128574816_128575198_128575346_128576822_128576957_128577128_128577274_128577351_128577507_128578109_128578246_128579636_128579739_128580921_128581060_128581781_128581893_128582478_128582557_128582693_128582850_128583076_128583282_128583787_128583970_128584281_128584526_128584720_128584844_128585747_128585966_128587605_128587699_128588808_128588944_128591476_128591626_128594174_128594374_128598399_128598505_128598962_128598987_128600079_128600116_128603542_128603591_128604325_128604418_128605033_128605179_128605295_128605478_128607603_128607704_128607851_128608050_128608129_128608277_128608873_128608978_128609121_128609285_128609650_128609666_128611713_128611846_128612108_128612247_128613380_128613486_128615631_128615841_128617639_128617761_128617986_128618109_128618870_128619004_128621157_128621257_128624327_128624488_128625102_128625180_128625768_128625979_128626390_128626688_128627385_128627499_128630320_128630376_128632126_128632324_128632430_128632485_128632571_128632719_128632807_128632956_128633208
H1_mix_00086259	chr9	+	1713	6	FSM	ENSG00000197694.18	ENST00000625980.2	1713	6	0	0	0	0	multi-exon	FALSE	canonical	3	584	junction_2	39.2255019088348	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTTTGCTTTTCTTCAT	NA	False	NA	4	True	AATAAA	-15	NA	128629659	128633659	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128630376_128632126_128632324_128632430_128632485_128632571_128632719_128632807_128632956_128633208
H1_mix_00086260	chr9	+	2844	8	FSM	ENSG00000119335.18	ENST00000372692.8	2850	8	0	6	0	-2	multi-exon	FALSE	canonical	3	2179	junction_1	1670.65604857884	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGGGTCATTCTCCTTG	4	False	NA	17	True	AATAAA	-22	NA	128683654	128696394	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128684008_128691169_128691228_128691857_128692001_128692661_128692766_128692867_128692982_128693637_128693809_128693895_128694043_128694640
H1_mix_00086261	chr9	+	2927	8	FSM	ENSG00000119335.18	ENST00000322030.13	2927	8	0	0	0	0	multi-exon	FALSE	canonical	3	4802	junction_1	830.220255998002	2686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTCATTCTCCTTGTT	-23	True	NA	19	True	AATAAA	-24	NA	128689221	128696396	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128689656_128691169_128691228_128691857_128692001_128692661_128692766_128692867_128692982_128693637_128693809_128693895_128694043_128694640
H1_mix_00086262	chr9	+	3393	22	FSM	ENSG00000160447.7	ENST00000291906.5	3393	22	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_12	11.3814504772453	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACTGGCAGCAGCCTGGG	-8	True	NA	27	True	ATTAAA	-13	NA	128702502	128720916	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128702940_128705302_128705544_128705733_128705880_128706712_128706825_128706895_128707024_128707221_128707406_128713051_128713199_128713277_128713388_128713498_128713643_128714045_128714122_128714196_128714366_128714561_128714665_128714797_128714866_128715171_128715236_128715368_128715461_128716746_128716924_128718324_128718388_128718548_128718626_128719685_128719829_128719909_128720018_128720202_128720284_128720393
H1_mix_00086263	chr9	+	548	2	FSM	ENSG00000223478.2	ENST00000443631.2	559	2	6	5	6	-5	multi-exon	FALSE	canonical	3	35	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGGGCCCTGATGCTCCGT	-10	True	NA	11	True	AATAAA	-20	NA	128724440	128733194	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128724636_128732841
H1_mix_00086265	chr9	+	3855	12	FSM	ENSG00000107021.16	ENST00000372648.10	3855	12	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_8	17.5414503202798	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGTGCTGTGATGAGCT	-33	True	NA	19	True	AATAAA	-22	NA	128787252	128810430	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128787377_128788333_128788408_128790734_128790776_128791379_128791442_128791593_128791694_128792491_128792575_128797054_128797215_128803249_128803461_128803955_128804120_128805858_128806020_128806253_128806312_128807813
H1_mix_00086267	chr9	+	1145	3	FSM	ENSG00000167136.7	ENST00000372642.5	1145	3	0	0	0	0	multi-exon	TRUE	canonical	3	199	junction_1	21.5	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAAGTCTGGTGGCGTCCG	0	True	NA	26	True	ATTAAA	-17	NA	128818499	128822676	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128819186_128820738_128820849_128822327
H1_mix_00086268	chr9	+	4356	4	FSM	ENSG00000136802.12	ENST00000372600.9	4334	4	-22	0	-22	0	multi-exon	FALSE	canonical	3	766	junction_3	28.1108915230774	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCCTTTGGAGGTCTTTG	-1	True	NA	18	True	AATAAA	-15	NA	128882110	128918039	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128882251_128886014_128886122_128907156_128909322_128916095
H1_mix_00086272	chr9	+	1225	10	NIC	ENSG00000175287.19	novel	1599	12	NA	NA	166	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_7	29.480690478873	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCCTACTGAGCCTTCT	109	False	NA	21	True	AATAAA	-18	NA	128921913	128942038	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_128922048_128922282_128922357_128927037_128927197_128933781_128933858_128934010_128934059_128936447_128936504_128936582_128936646_128940598_128940716_128941444_128941572_128941667
H1_mix_00086275	chr9	+	5705	44	FSM	ENSG00000095319.14	ENST00000372577.2	5689	44	-16	0	-16	0	multi-exon	FALSE	canonical	3	546	junction_1	80.3864382116191	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGATGTTTAACTTC	2	False	NA	31	True	ATTAAA	-17	NA	128947682	129007096	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128947752_128949188_128949244_128952772_128952847_128956349_128956435_128956951_128957033_128958009_128958055_128958801_128958895_128959014_128959135_128968505_128968718_128969399_128969515_128970757_128970959_128973159_128973250_128979261_128979328_128980605_128980726_128981263_128981391_128982548_128982702_128982901_128983029_128983292_128983381_128983473_128983551_128984899_128985015_128986557_128986679_128986808_128986876_128987588_128987718_128988046_128988187_128990119_128990227_128993196_128993404_128993524_128993695_128994372_128994443_128994855_128994924_128995318_128995515_128998150_128998229_128998537_128998624_128999171_128999318_128999623_128999806_129001528_129001730_129001883_129001977_129002816_129002976_129003316_129003455_129005146_129005222_129005302_129005531_129005644_129005777_129006049_129006124_129006238_129006369_129006501
H1_mix_00086280	chr9	+	3616	16	FSM	ENSG00000148343.19	ENST00000684074.1	3610	16	-6	0	-1	0	multi-exon	FALSE	canonical	3	27	junction_13	26.2182294511959	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCATGTTGTTGGTTA	-7	True	NA	28	True	AATAAA	-23	NA	129036619	129072082	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129036682_129040451_129040691_129042303_129042515_129048426_129048540_129049380_129049499_129049826_129049964_129059153_129059272_129060549_129060651_129061230_129061347_129063243_129063317_129063544_129063632_129067772_129067872_129068197_129068333_129069075_129069130_129069848_129069966_129070246
H1_mix_00086281	chr9	+	3637	16	FSM	ENSG00000148343.19	ENST00000358369.8	3637	16	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	33.1720096198922	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCATGTTGTTGGTTA	282	False	NA	28	True	AATAAA	-23	NA	129036933	129072082	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129037017_129040451_129040691_129042303_129042515_129048426_129048540_129049380_129049499_129049826_129049964_129059153_129059272_129060549_129060651_129061230_129061347_129063243_129063317_129063544_129063632_129067772_129067872_129068197_129068333_129069075_129069130_129069848_129069966_129070246
H1_mix_00086282	chr9	+	445	4	FSM	ENSG00000148343.19	ENST00000494608.1	445	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	57.0457905740837	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAGCAGGGGGTGGGGTGG	NA	False	NA	NA	False	NA	NA	NA	129060551	129063630	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129060651_129061230_129061347_129063172_129063317_129063544
H1_mix_00086284	chr9	+	3083	8	ISM	ENSG00000148343.19	ENST00000439290.5	4345	17	24653	0	0	0	3prime_fragment	FALSE	canonical	3	69	junction_5	20.0916268477133	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTTCCACTTTGCCAT	NA	False	NA	17	True	AATAAA	-12	NA	129061296	129072071	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_129061347_129063243_129063317_129063544_129063632_129067772_129067872_129068197_129068976_129069075_129069130_129069848_129069966_129070246
H1_mix_00086288	chr9	+	2044	7	FSM	ENSG00000167130.18	ENST00000406974.7	2037	7	-7	0	-7	0	multi-exon	FALSE	canonical	3	19	junction_5	95.130465969402	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTTGAGCACTTGCTGA	-13	True	NA	13	True	AATAAA	-14	NA	129081103	129090435	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129081208_129084667_129084769_129085022_129085108_129085206_129085307_129085517_129085617_129086708_129086799_129088970
H1_mix_00086289	chr9	+	2176	8	FSM	ENSG00000167130.18	ENST00000372546.9	2169	8	-7	0	-7	0	multi-exon	FALSE	canonical	3	250	junction_5	13.4786301005612	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGAGCACTTGCTGATTG	-13	True	NA	16	True	AATAAA	-17	NA	129081103	129090438	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129081208_129084667_129084769_129085022_129085108_129085206_129085307_129085517_129085617_129086138_129086268_129086708_129086799_129088970
H1_mix_00086290	chr9	+	963	9	FSM	ENSG00000119383.21	ENST00000455292.6	949	9	-14	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	287.221930743458	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTCTGCCCTTCATCTGG	-2	True	NA	NA	False	NA	NA	NA	129110949	129136556	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129111033_129111471_129111632_129120512_129120611_129123051_129123139_129127963_129128069_129128984_129129111_129131521_129131640_129134794_129134895_129136470
H1_mix_00086292	chr9	+	2750	11	FSM	ENSG00000119383.21	ENST00000337738.6	2746	11	-4	0	0	0	multi-exon	FALSE	canonical	3	72	junction_4	233.713071949346	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGAGGTATGTCTT	6	True	NA	25	True	ATTAAA	-21	NA	129111408	129148945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129111632_129120512_129120611_129123051_129123139_129127963_129128069_129128984_129129111_129131521_129131640_129134794_129134895_129136470_129136596_129137591_129137693_129142444_129142553_129147386
H1_mix_00086293	chr9	+	2646	10	FSM	ENSG00000119383.21	ENST00000393370.7	2640	10	-6	0	0	0	multi-exon	FALSE	canonical	3	530	junction_3	61.9856614244151	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGAGGTATGTCTTT	6	True	NA	26	True	ATTAAA	-22	NA	129111408	129148946	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129111632_129120512_129120611_129123051_129123139_129128984_129129111_129131521_129131640_129134794_129134895_129136470_129136596_129137591_129137693_129142444_129142553_129147386
H1_mix_00086297	chr9	+	1138	3	FSM	ENSG00000119383.21	ENST00000414510.5	1153	3	15	0	15	0	multi-exon	FALSE	canonical	3	119	junction_1	305	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGCAGAAACTCAGGGAG	16	False	NA	NA	False	NA	NA	NA	129140022	129148287	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129140152_129142444_129142553_129147386
H1_mix_00086301	chr9	+	802	4	FSM	ENSG00000233901.7	ENST00000665063.2	2229	4	-1	1428	-1	2	multi-exon	FALSE	canonical	2	4	junction_1	4.54606056566195	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTTGTTGCCGTGTGAA	1065	False	NA	26	True	ATTAAA	-31	NA	129336874	129347479	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129336989_129338791_129338918_129341735_129342044_129347225
H1_mix_00086302	chr9	+	1548	4	FSM	ENSG00000148335.15	ENST00000372483.9	1530	4	-22	4	-12	0	multi-exon	FALSE	canonical	3	505	junction_3	41.5237549147741	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCACTTTGGGAGGCCG	NA	False	NA	NA	False	AATAAA	-34	NA	129626140	129636131	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129626296_129632649_129632866_129634053_129634307_129635207
H1_mix_00086303	chr9	+	1581	4	FSM	ENSG00000148335.15	ENST00000611055.4	1562	4	-19	0	-19	0	multi-exon	TRUE	canonical	3	21	junction_1	233.51802214533	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCACTTTGGGAGGCCG	NA	False	NA	NA	False	AATAAA	-34	NA	129626133	129636131	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129626322_129632649_129632866_129634053_129634307_129635207
H1_mix_00086304	chr9	+	746	4	FSM	ENSG00000148335.15	ENST00000372481.7	741	4	-5	0	0	0	multi-exon	FALSE	canonical	3	149	junction_3	198.247320284538	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAGGAGAAACTGAGGAAC	28	False	NA	NA	False	GGGGCT	-1	NA	129626199	129635473	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129626296_129632649_129632866_129634053_129634222_129635207
H1_mix_00086305	chr9	+	1305	4	FSM	ENSG00000167157.11	ENST00000372469.6	1305	4	0	0	0	0	multi-exon	TRUE	canonical	3	80	junction_2	8.17856276425687	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGCAGGAAGGTGGGTAA	8	True	NA	14	True	AATAAA	-23	NA	129665646	129722674	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129666127_129719230_129719419_129720595_129720775_129722216
H1_mix_00086306	chr9	+	2878	2	FSM	ENSG00000136816.16	ENST00000486372.1	663	2	-18	-2197	-18	2197	multi-exon	FALSE	canonical	3	60	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGAGCCTGGCCAACATGGC	NA	False	NA	NA	False	NA	NA	NA	129803138	129806677	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129803412_129804072
H1_mix_00086307	chr9	+	2743	5	FSM	ENSG00000136816.16	ENST00000259339.7	2738	5	-5	0	-5	0	multi-exon	FALSE	canonical	0	0	junction_2	25.0636689253589	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGCCGTTACTGATTTG	-5	True	NA	17	True	AATAAA	-17	NA	129803178	129811281	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129803412_129804072_129804339_129807187_129807364_129808904_129809033_129809341
H1_mix_00086308	chr9	+	4303	26	FSM	ENSG00000136878.14	ENST00000372429.8	4293	26	-10	0	-10	0	multi-exon	FALSE	canonical	3	52	junction_1	20.6481379305738	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACGGCCACACAGTCGTC	-12	True	NA	13	True	AATAAA	-16	NA	129835447	129881828	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129835500_129849812_129849925_129852539_129852637_129856306_129856361_129858049_129858113_129858466_129858599_129860936_129861034_129861542_129861613_129863185_129863300_129865302_129865382_129868004_129868450_129868861_129869003_129869309_129869426_129869671_129869845_129870452_129870548_129873481_129873516_129873698_129873745_129874575_129874757_129874828_129874956_129875309_129875480_129875559_129875642_129876129_129876239_129878337_129878441_129879572_129879645_129880112_129880290_129880466
H1_mix_00086309	chr9	+	4376	26	NIC	ENSG00000136878.14	novel	4293	26	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_25	24.8397745561428	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACGGCCACACAGTCGTC	3	True	NA	13	True	AATAAA	-16	NA	129835462	129881828	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_129835500_129849812_129849925_129852539_129852637_129856306_129856361_129858049_129858113_129858466_129858599_129860936_129861034_129861542_129861613_129863185_129863300_129865302_129865382_129868004_129868450_129868861_129869003_129869309_129869426_129869671_129869845_129870452_129870548_129873481_129873516_129873698_129873745_129874575_129874757_129874828_129874956_129875309_129875480_129875559_129875642_129876129_129876239_129878337_129878441_129879572_129879645_129880112_129880290_129880378
H1_mix_00086312	chr9	+	7279	18	FSM	ENSG00000148358.20	ENST00000347136.11	6729	18	-550	0	-70	0	multi-exon	FALSE	canonical	0	0	junction_14	23.8166293566078	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGTGTGTTTGAGATGCA	8179	False	NA	20	True	AATAAA	-16	NA	130053355	130140164	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_130054074_130075635_130075750_130076411_130076463_130077298_130077379_130079629_130079770_130083564_130083603_130086419_130086477_130090875_130090984_130092247_130092382_130099456_130099533_130100628_130100703_130101105_130101224_130104419_130104551_130107495_130107540_130124914_130124965_130127482_130127567_130128639_130128762_130135024
H1_mix_00086313	chr9	+	7285	19	FSM	ENSG00000148358.20	ENST00000372410.7	6991	19	-299	5	-19	0	multi-exon	FALSE	canonical	0	0	junction_14	25.7293606605372	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGTGTGTTTGAGATGCA	8230	False	NA	20	True	AATAAA	-16	NA	130053406	130140164	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_130054074_130075635_130075750_130076411_130076463_130077298_130077379_130079629_130079770_130083564_130083603_130086419_130086477_130090875_130090984_130092247_130092382_130099456_130099533_130100628_130100703_130101105_130101224_130104419_130104551_130107495_130107540_130110369_130110427_130124914_130124965_130127482_130127567_130128639_130128762_130135024
H1_mix_00086315	chr9	+	5244	8	FSM	ENSG00000107130.10	ENST00000372398.6	5164	8	-80	0	-80	0	multi-exon	FALSE	canonical	3	251	junction_1	29.5241167418732	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTGTGTGGGCCTGTTG	NA	False	NA	13	True	ATTAAA	-25	NA	130172323	130237303	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_130172728_130200957_130200983_130217831_130217971_130219724_130219804_130222649_130222739_130223081_130223160_130226388_130226505_130232989
H1_mix_00086316	chr9	+	1136	8	FSM	ENSG00000148357.18	ENST00000480829.1	2220	8	0	1084	0	-1084	multi-exon	FALSE	canonical	2	4	junction_2	2.84999104903714	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGGTCTGCTGGGCATG	NA	False	NA	NA	False	NA	NA	NA	130398641	130406168	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_130398708_130399510_130399633_130400782_130400948_130402788_130402897_130403193_130403329_130403740_130403876_130404868_130405060_130405954
H1_mix_00086318	chr9	+	1532	15	FSM	ENSG00000130707.18	ENST00000352480.10	1532	15	0	0	0	0	multi-exon	FALSE	canonical	3	440	junction_1	61.0327780786685	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGTGTGTGTGTGTGT	0	True	NA	30	True	ATTAAA	-25	NA	130444960	130501274	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_130444996_130452223_130452334_130454304_130454374_130458400_130458590_130464110_130464168_130466724_130466800_130470833_130470905_130471484_130471516_130476870_130476962_130479715_130479801_130480384_130480450_130489332_130489465_130494866_130495024_130499504_130499571_130500975
H1_mix_00086320	chr9	+	1548	16	FSM	ENSG00000130707.18	ENST00000372393.7	1548	16	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	206.695868904587	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGTCTTTTATTTCTAG	27	False	NA	11	True	ATTAAA	-6	NA	130444987	130501255	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_130444996_130450271_130450334_130452223_130452334_130454304_130454374_130458400_130458590_130464110_130464168_130466724_130466800_130470833_130470905_130471484_130471516_130476870_130476962_130479715_130479801_130480384_130480450_130489332_130489465_130494866_130495024_130499504_130499571_130500975
H1_mix_00086322	chr9	+	2228	2	FSM	ENSG00000107164.16	ENST00000467100.1	2228	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTGTGAAGTCTAGTGAG	NA	False	NA	NA	False	AATAAA	-19	NA	130578964	130582086	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_130579765_130580658
H1_mix_00086323	chr9	+	3153	19	FSM	ENSG00000107164.16	ENST00000319725.10	3153	19	0	0	0	0	multi-exon	TRUE	canonical	3	520	junction_16	63.1792472569167	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGGCCTGTTTGCTTTC	-18	True	NA	47	True	AATAAA	-31	NA	130579576	130638352	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_130579765_130595482_130595589_130609953_130609988_130612455_130612506_130612955_130613028_130614287_130614346_130616354_130616518_130617796_130617896_130620353_130620459_130622707_130622811_130623610_130623712_130626363_130626506_130630627_130630789_130631556_130631631_130631941_130632023_130632201_130632279_130634666_130634739_130635998_130636127_130637013
H1_mix_00086324	chr9	+	1391	3	FSM	ENSG00000107164.16	ENST00000472006.1	284	3	-1107	0	-1107	0	multi-exon	FALSE	canonical	3	528	junction_1	85.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAATCATTGTCAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	130633513	130637051	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_130634739_130635998_130636127_130637013
H1_mix_00086325	chr9	+	2030	9	FSM	ENSG00000130713.17	ENST00000372358.10	2012	9	-18	0	-3	0	multi-exon	FALSE	canonical	3	178	junction_7	16.2860177759942	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTATCTAAAAATGGTGC	-11	True	NA	14	True	NA	NA	NA	130693761	130704892	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_130693914_130695491_130695594_130697581_130697628_130698161_130698252_130699328_130699395_130700866_130700936_130702133_130702311_130703052_130703182_130703693
H1_mix_00086326	chr9	+	2766	3	FSM	ENSG00000130713.17	ENST00000467138.1	2766	3	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	21	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGAATTCCTGTGCATT	7069	False	NA	-17	True	GATAAA	-27	NA	130700841	130704861	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_130702311_130703052_130703182_130703693
H1_mix_00086327	chr9	+	6946	11	FSM	ENSG00000097007.19	ENST00000372348.7	4754	11	-200	-1992	-200	0	multi-exon	FALSE	canonical	3	52	junction_1	102.227246857186	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGCAGATTGCTTCGG	NA	False	NA	23	True	AATAAA	-19	NA	130712815	130887675	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_130714456_130854063_130854238_130854800_130855097_130862762_130863036_130872128_130872214_130872859_130873038_130874867_130875053_130878414_130878568_130880067_130880158_130880499_130880665_130883968
H1_mix_00086328	chr9	+	5593	11	FSM	ENSG00000097007.19	ENST00000318560.6	5578	11	-15	0	-15	0	multi-exon	FALSE	canonical	3	316	junction_1	31.1899022120942	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGCAGATTGCTTCGG	7	False	NA	23	True	AATAAA	-19	NA	130835238	130887675	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_130835526_130854063_130854238_130854800_130855097_130862762_130863036_130872128_130872214_130872859_130873038_130874867_130875053_130878414_130878568_130880067_130880158_130880499_130880665_130883968
H1_mix_00086329	chr9	+	6051	28	FSM	ENSG00000050555.19	ENST00000361069.9	7455	28	-14	1418	-14	997	multi-exon	FALSE	canonical	3	58	junction_6	15.4545219808658	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCAGGGTGGTGTGCCTC	-15	True	NA	13	True	AATAAA	-13	NA	131009159	131093055	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131009588_131026284_131026590_131032044_131032176_131036165_131036333_131038863_131039053_131039130_131039249_131041636_131041736_131045523_131045661_131049019_131049131_131052490_131052684_131052849_131052966_131056928_131057148_131061034_131061224_131066959_131067206_131068077_131068232_131068907_131069051_131069671_131069851_131071483_131071626_131072629_131072836_131073244_131073322_131075830_131075966_131077186_131077335_131079148_131079299_131082058_131082162_131085523_131085724_131087475_131087623_131087717_131087818_131091536
H1_mix_00086330	chr9	+	1806	2	ISM	ENSG00000050555.19	ENST00000361069.9	7455	28	-31	66828	-31	-54516	5prime_fragment	FALSE	canonical	3	70	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTTATTAACTTAGCCA	-32	True	NA	NA	False	AATAAA	-17	NA	131009142	131027645	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_131009588_131026284
H1_mix_00086331	chr9	+	1162	6	FSM	ENSG00000126878.13	ENST00000372314.3	3398	6	-471	2707	-417	0	multi-exon	TRUE	canonical	3	140	junction_1	464.278106311293	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTTTTCATCAATGTCT	NA	False	NA	NA	False	NA	NA	NA	131096058	131120438	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131096661_131096779_131096864_131111596_131111664_131114576_131114619_131117755_131117919_131120234
H1_mix_00086332	chr9	+	3375	6	FSM	ENSG00000126878.13	ENST00000247291.8	3374	6	-1	0	0	0	multi-exon	FALSE	canonical	3	1240	junction_5	35.9366108585659	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACGTCTTGATTGGTGTA	-2	True	NA	13	True	AATAAA	-14	NA	131096529	131123144	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131096661_131096801_131096864_131111596_131111664_131114576_131114619_131117755_131117919_131120234
H1_mix_00086333	chr9	+	7566	36	FSM	ENSG00000126883.18	ENST00000359428.10	7568	36	2	0	2	0	multi-exon	FALSE	canonical	3	134	junction_17	29.2582589072849	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATCATGTTGCAGACAGT	-30	True	NA	18	True	AATAAA	-19	NA	131125587	131234663	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131125750_131127523_131127720_131128331_131128484_131129278_131129478_131130765_131130837_131132595_131132660_131133105_131133210_131134897_131135005_131135939_131136007_131139280_131139408_131140548_131140711_131144279_131144755_131146128_131146305_131147489_131147585_131150323_131150411_131150615_131150766_131151735_131151895_131159382_131159487_131162990_131163174_131163869_131163956_131164060_131164145_131174054_131174319_131175459_131175622_131178310_131178411_131187288_131187365_131189052_131189132_131192207_131192293_131195232_131195295_131197215_131199016_131201646_131201718_131215211_131215369_131222777_131222931_131228159_131228332_131230629_131230770_131232283_131232309_131233453
H1_mix_00086334	chr9	+	7538	36	FSM	ENSG00000126883.18	ENST00000411637.6	7538	36	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_12	45.1494931831342	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATCATGTTGCAGACAGT	-32	True	NA	18	True	AATAAA	-19	NA	131125585	131234663	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131125750_131127523_131127720_131128331_131128484_131129278_131129478_131130765_131130837_131132595_131132660_131133105_131133210_131134897_131135005_131135939_131136007_131139280_131139408_131140548_131140711_131144279_131144755_131146161_131146305_131147486_131147585_131150323_131150411_131150615_131150766_131151735_131151895_131159382_131159487_131162990_131163174_131163869_131163956_131164060_131164145_131174054_131174319_131175459_131175622_131178310_131178411_131187288_131187365_131189052_131189132_131192207_131192293_131195232_131195295_131197215_131199016_131201646_131201718_131215211_131215369_131222777_131222931_131228159_131228332_131230629_131230770_131232283_131232309_131233453
H1_mix_00086335	chr9	+	560	5	FSM	ENSG00000126883.18	ENST00000530863.1	560	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	64.6659686388443	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCTGCCTCCAAGCCA	9913	False	NA	NA	False	NA	NA	NA	131135987	131146193	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131136007_131139280_131139408_131140548_131140711_131144567_131144755_131146128
H1_mix_00086337	chr9	+	2089	2	FSM	ENSG00000160539.6	ENST00000372264.4	2065	2	-24	0	-24	0	multi-exon	FALSE	canonical	3	22	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTCCCGTGTGGCTTTTT	-13	True	NA	22	True	AATACA	-18	NA	131289698	131309261	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131290449_131307922
H1_mix_00086338	chr9	+	11265	32	FSM	ENSG00000288701.1	ENST00000684596.1	11253	32	-12	0	-12	0	multi-exon	TRUE	canonical	3	127	junction_15	68.6802299459738	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAAAGTTTAAAAA	46	False	NA	-9	True	NA	NA	NA	131394040	131500171	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131394264_131430089_131430260_131432616_131432795_131436619_131436723_131438988_131439062_131444184_131444329_131446400_131446643_131447084_131447207_131447661_131447805_131455075_131455167_131459163_131459357_131464762_131465079_131467562_131467754_131470787_131470984_131473507_131473725_131474453_131476536_131477743_131477950_131478473_131478620_131479251_131479394_131481725_131481809_131482370_131482563_131482709_131482908_131483358_131483446_131484685_131484791_131484947_131485141_131486084_131486183_131487166_131487295_131487855_131488097_131491424_131491581_131492168_131492261_131494404_131494487_131495739
H1_mix_00086340	chr9	+	11157	31	NIC	ENSG00000288701.1	novel	11238	32	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	127	junction_15	71.5530028875254	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAAAGCTGAACGTGCTT	0	True	NA	10	True	AATAAA	-13	NA	131394085	131500190	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_131394264_131430089_131430260_131432616_131432795_131436619_131436723_131438988_131439062_131444184_131444329_131446400_131446643_131447084_131447207_131447661_131447805_131455075_131455167_131459163_131459357_131464762_131465079_131467562_131467754_131470787_131470984_131473507_131473725_131474453_131476536_131477743_131477950_131478473_131478620_131479251_131479394_131481725_131481809_131482370_131482563_131482709_131482908_131483358_131483446_131484685_131484791_131484947_131485141_131486084_131486183_131487166_131487295_131487855_131488097_131491424_131491581_131492168_131492261_131495739
H1_mix_00086341	chr9	+	11238	32	FSM	ENSG00000288701.1	ENST00000683519.1	11238	32	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	76.2121061227612	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTGAACGTGCTTTCT	0	True	NA	13	True	AATAAA	-16	NA	131394085	131500193	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131394264_131430093_131430260_131432616_131432795_131436619_131436723_131438988_131439062_131444184_131444329_131446400_131446643_131447084_131447207_131447661_131447805_131455075_131455167_131459163_131459357_131464762_131465079_131467562_131467754_131470787_131470984_131473507_131473725_131474453_131476536_131477743_131477950_131478473_131478620_131479251_131479394_131481725_131481809_131482370_131482563_131482709_131482908_131483358_131483446_131484685_131484791_131484947_131485141_131486084_131486183_131487166_131487295_131487855_131488097_131491424_131491581_131492168_131492261_131494404_131494487_131495739
H1_mix_00086342	chr9	+	9164	31	FSM	ENSG00000288701.1	ENST00000682501.1	9157	31	-7	0	0	0	multi-exon	FALSE	canonical	3	109	junction_15	70.1697624020173	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAACGTGCTTTCTCAGG	0	True	NA	17	True	AATAAA	-20	NA	131394085	131500197	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131394264_131430089_131430260_131432616_131432795_131436619_131436723_131438988_131439062_131444184_131444329_131446400_131446643_131447084_131447207_131447661_131447805_131455075_131455167_131459163_131459357_131464762_131465079_131467562_131467754_131470787_131470984_131473507_131473725_131477743_131477950_131478473_131478620_131479251_131479394_131481725_131481809_131482370_131482563_131482709_131482908_131483358_131483446_131484685_131484791_131484947_131485141_131486084_131486183_131487166_131487295_131487855_131488097_131491424_131491581_131492168_131492261_131494404_131494487_131495739
H1_mix_00086346	chr9	+	6949	17	FSM	ENSG00000288701.1	ENST00000682662.1	6949	17	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_13	90.0985571471597	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAAAGCTGAACGTGCTT	1694	False	NA	10	True	AATAAA	-13	NA	131476189	131500190	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131476536_131477743_131477950_131478473_131478620_131479251_131479394_131481725_131481809_131482370_131482563_131482709_131482908_131483358_131483446_131484685_131484791_131484947_131485141_131486084_131486183_131487166_131487295_131487855_131488097_131491421_131491581_131492168_131492261_131494404_131494487_131495739
H1_mix_00086347	chr9	+	4950	5	FSM	ENSG00000288701.1	ENST00000683161.1	4950	5	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_4	93.5534606521854	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAACGTGCTTTCTCAGG	NA	False	NA	17	True	AATAAA	-20	NA	131487291	131500197	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131487295_131487855_131488097_131491424_131491581_131492168_131492261_131495739
H1_mix_00086348	chr9	+	6998	3	FSM	ENSG00000231587.1_ENSG00000288701.1	ENST00000684112.1	5366	3	-1636	4	-1357	0	multi-exon	FALSE	canonical	3	173	junction_2	117.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTGAACGTGCTTTCT	NA	False	NA	13	True	AATAAA	-16	NA	131489128	131500193	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131491581_131492168_131492261_131495739
H1_mix_00086349	chr9	+	2905	19	FSM	ENSG00000130714.19	ENST00000341012.13	2935	19	30	0	3	0	multi-exon	FALSE	canonical	3	48	junction_1	28.1166002545924	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTGTTTGTTATTTATT	-41	True	NA	21	True	ATTAAA	-24	NA	131502924	131523806	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131503074_131506113_131506221_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131509997_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
H1_mix_00086350	chr9	+	2825	18	FSM	ENSG00000130714.19	ENST00000677216.1	2461	18	-8	-356	-5	0	multi-exon	TRUE	canonical	3	17	junction_1	34.5627156756944	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTGTAGTTGGTGTTTGT	NA	False	NA	13	True	ATTAAA	-16	NA	131502889	131523798	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131503074_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131509997_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
H1_mix_00086351	chr9	+	3151	20	FSM	ENSG00000130714.19	ENST00000372228.9	3252	20	101	0	-5	0	multi-exon	FALSE	canonical	3	3	junction_8	40.8625152475294	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTAGTTGGTGTTTGTT	NA	False	NA	14	True	ATTAAA	-17	NA	131502889	131523799	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131503074_131504188_131504341_131506113_131506221_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131510063_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
H1_mix_00086353	chr9	+	3057	20	FSM	ENSG00000130714.19	ENST00000402686.8	3057	20	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	29.6243330394667	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTAGTTGGTGTTTGTT	-48	True	NA	14	True	ATTAAA	-17	NA	131502917	131523799	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131503074_131504188_131504341_131506113_131506221_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131509997_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
H1_mix_00086358	chr9	+	2758	14	FSM	ENSG00000130714.19	ENST00000677444.1	2758	14	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	39.6927549169796	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATACAGCTCCATGCCTTT	5975	False	NA	-44	True	NA	NA	NA	131508940	131523741	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131509023_131509742_131509809_131509902_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518697_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
H1_mix_00086360	chr9	+	1290	4	FSM	ENSG00000283526.1	ENST00000636672.1	1312	4	22	0	22	0	multi-exon	FALSE	canonical	3	19	junction_1	45.0357882380471	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGCCCAACCTCCAGCCCA	-12	True	NA	NA	False	NA	NA	NA	131545535	131558620	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131545641_131554556_131555030_131556069_131556214_131558052
H1_mix_00086361	chr9	+	2515	4	NNC	ENSG00000283526.1	novel	1312	4	NA	NA	22	1195	at_least_one_novel_splicesite	FALSE	canonical	3	81	junction_1	15.8394724940223	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCCTGGTGTCTCTATT	-12	True	NA	15	True	ATTAAA	-20	NA	131545535	131559815	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_131545671_131554556_131555030_131556069_131556214_131558052
H1_mix_00086362	chr9	+	2617	5	NNC	ENSG00000283526.1	novel	1312	4	NA	NA	22	1195	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	46.8474919285974	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCCTGGTGTCTCTATT	-12	True	NA	15	True	ATTAAA	-20	NA	131545535	131559815	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_131545671_131549533_131549636_131554556_131555030_131556069_131556214_131558052
H1_mix_00086363	chr9	+	6140	4	NNC	ENSG00000283526.1	novel	1312	4	NA	NA	1562	2395	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	42.2084772949174	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGAGGCCTCTTAAAATCT	1528	False	NA	56	True	NA	NA	NA	131547075	131561015	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_131549636_131554556_131555030_131556069_131556214_131558052
H1_mix_00086365	chr9	+	8612	5	FSM	ENSG00000125484.12	ENST00000372146.5	8612	5	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_4	11.8110118110177	167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGCGTGTCTGTTTTATG	-30	True	NA	13	True	AATAAA	-18	NA	132670463	132694953	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_132670956_132677976_132679804_132683562_132683694_132687238_132687328_132688880
H1_mix_00086367	chr9	+	2068	1	FSM	ENSG00000196205.8	ENST00000436459.2	1389	1	-365	-314	-365	314	mono-exon	FALSE	NA	NA	NA	NA	NA	550	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATAATAATATTTTGAG	NA	False	NA	NA	False	ATTAAA	-36	NA	133019120	133021188	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_133019100_133021200
H1_mix_00086369	chr9	+	2098	11	FSM	ENSG00000148308.18	ENST00000372097.10	2098	11	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_8	52.4329095130148	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGGTTTCTTGGTGTGA	-1	True	NA	27	True	ATTAAA	-16	NA	133030996	133058503	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_133031165_133042086_133042307_133043727_133043927_133050782_133050979_133052059_133052165_133053827_133053943_133054407_133054489_133054711_133054810_133056011_133056095_133056765_133056909_133057813
H1_mix_00086370	chr9	+	947	6	FSM	ENSG00000148303.17	ENST00000496554.5	947	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	2104.63655769826	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACCACTGTCGCCTTCAC	7	True	NA	NA	False	NA	NA	NA	133348217	133350695	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_133348574_133348921_133349043_133349550_133349701_133349911_133350053_133350239_133350320_133350596
H1_mix_00086371	chr9	+	887	8	FSM	ENSG00000148303.17	ENST00000323345.11	887	8	0	0	0	0	multi-exon	FALSE	canonical	3	2639	junction_1	926.621204777258	4442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGTCTGTTGAGTATC	7	True	NA	24	True	CATAAA	-31	NA	133348217	133351426	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_133348247_133348921_133349043_133349550_133349701_133349911_133350053_133350239_133350320_133350596_133350728_133351001_133351072_133351261
H1_mix_00086372	chr9	+	1057	5	FSM	ENSG00000148303.17	ENST00000426651.1	1057	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2274.48207016455	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCGTTTGCCTGTTGACT	-1	True	NA	NA	False	AAGAAA	-42	NA	133348251	133350318	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_133348818_133348921_133349043_133349550_133349701_133349911_133350053_133350239
H1_mix_00086373	chr9	+	941	8	FSM	ENSG00000148303.17	ENST00000468019.5	941	8	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_1	1753.5977245628	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTGAGTTTTCTGTACA	-1	True	NA	15	True	ACTAAA	-16	NA	133348251	133351372	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_133348389_133348921_133349043_133349550_133349701_133349911_133350053_133350239_133350320_133350596_133350728_133351001_133351072_133351261
H1_mix_00086376	chr9	+	844	6	FSM	ENSG00000148291.10	ENST00000371964.5	833	6	-11	0	-11	0	multi-exon	TRUE	canonical	3	524	junction_5	50.7290843599606	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCGAGAAAGCCTTCAGA	-30	True	NA	16	True	AATAAA	-16	NA	133356538	133361158	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_133356671_133356913_133357069_133357710_133357815_133359949_133360130_133360264_133360435_133361055
H1_mix_00086377	chr9	+	4891	29	FSM	ENSG00000160323.19	ENST00000371929.7	4934	29	43	0	43	0	multi-exon	FALSE	canonical	1	1	junction_7	9.81252843489966	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGCGTTTTTTTCTTATAA	171	False	NA	13	True	AATAAA	-18	NA	133422042	133459386	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_133422549_133423100_133423168_133424320_133424479_133425528_133425613_133425937_133426063_133426198_133426346_133428633_133428772_133429938_133430102_133432587_133432693_133433377_133433530_133433640_133433705_133436828_133436956_133437748_133437898_133438245_133438367_133439365_133439447_133440343_133440526_133442398_133442535_133442613_133442744_133443375_133443562_133444862_133445053_133445698_133445820_133448598_133448729_133449782_133449966_133454414_133454620_133455284_133455604_133456068_133456216_133456542_133456720_133457909_133458095_133458973
H1_mix_00086378	chr9	+	2862	6	FSM	ENSG00000160325.15	ENST00000540581.5	2880	6	15	3	2	-3	multi-exon	FALSE	canonical	2	4	junction_4	36.1861852092757	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTGGTGCCTGTGTGTG	-17	True	NA	40	True	AATAAA	-40	NA	133459979	133470784	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_133460188_133463482_133463556_133465321_133465448_133467920_133468029_133468339_133468465_133468562
H1_mix_00086379	chr9	+	2797	5	FSM	ENSG00000160325.15	ENST00000316948.9	2803	5	6	0	-3	0	multi-exon	FALSE	canonical	3	65	junction_2	10.4880884817015	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCCTGTCCCGAGGCTGC	-13	True	NA	104	True	NA	NA	NA	133459983	133470848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_133460188_133463482_133463556_133465321_133465448_133467920_133468029_133468562
H1_mix_00086380	chr9	+	2671	4	FSM	ENSG00000160325.15	ENST00000291722.11	2688	4	17	0	-3	0	multi-exon	FALSE	canonical	3	26	junction_2	29.743346594939	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCCTGTCCCGAGGCTGC	-13	True	NA	104	True	NA	NA	NA	133459983	133470848	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_133460188_133463482_133463556_133467920_133468029_133468562
H1_mix_00086382	chr9	+	5682	3	FSM	ENSG00000235106.10	ENST00000603928.3	5682	3	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	14	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAACTCACCAAGTGTCA	-4	True	NA	NA	False	ATTAAA	-17	NA	134025480	134031587	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_134025537_134025844_134026091_134026207
H1_mix_00086383	chr9	+	5974	2	FSM	ENSG00000235106.10	ENST00000432807.1	2300	2	-189	-3485	-175	0	multi-exon	FALSE	canonical	3	95	junction_1	0	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAACTCACCAAGTGTCA	NA	False	NA	NA	False	ATTAAA	-17	NA	134025305	134031587	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_134025537_134025844
H1_mix_00086384	chr9	+	899	3	FSM	ENSG00000196363.10	ENST00000608937.5	705	3	-194	0	-194	0	multi-exon	FALSE	canonical	3	8	junction_1	171.5	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTGGCTGGCAAGTTCA	NA	False	NA	NA	False	NA	NA	NA	134135170	134140790	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_134135843_134139819_134139959_134140702
H1_mix_00086385	chr9	+	3169	14	FSM	ENSG00000196363.10	ENST00000358625.4	3157	14	-12	0	-12	0	multi-exon	FALSE	canonical	3	198	junction_1	33.7596797427251	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTCTGGTGAGAATTTC	-18	True	NA	23	True	AATAAA	-19	NA	134136069	134159968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_134136201_134139819_134139959_134140702_134140812_134141509_134141584_134141948_134142039_134142332_134142423_134142635_134142720_134148287_134148344_134151982_134152030_134154465_134154542_134155339_134155374_134155692_134155768_134156505_134156594_134157892
H1_mix_00086386	chr9	+	845	1	FSM	ENSG00000273473.1	ENST00000608264.1	572	1	-303	30	-303	-30	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTGTGTGTGATCTCTC	NA	False	NA	NA	False	AATAAA	-1	NA	134168465	134169310	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_134168500_134169300
H1_mix_00086387	chr9	+	5596	10	FSM	ENSG00000186350.12	ENST00000481739.2	5537	10	-59	0	-59	0	multi-exon	TRUE	canonical	3	66	junction_1	18.2235771853964	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCCGTGTGGGGACTTTT	224	False	NA	28	True	AATACA	-18	NA	134326395	134440585	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_134326660_134401631_134401883_134408148_134408300_134408939_134409120_134417157_134417328_134421675_134421806_134429107_134429241_134431904_134431997_134434101_134434208_134436466
H1_mix_00086388	chr9	+	8226	66	FSM	ENSG00000130635.16	ENST00000371817.8	8442	66	-79	295	-79	-292	multi-exon	TRUE	canonical	3	25	junction_1	20.7234024302001	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTGGTGTAATTTTAT	-5	True	NA	14	True	AATAAA	-24	NA	134641723	134844548	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_134642297_134690911_134691080_134699908_134700123_134701170_134701334_134727265_134727398_134728669_134728808_134730235_134730476_134731495_134731664_134732070_134732128_134738473_134738516_134738745_134738809_134750541_134750617_134750789_134750883_134752588_134752646_134753849_134753904_134754272_134754327_134756764_134756819_134758242_134758297_134761924_134761979_134763692_134763738_134765680_134765735_134766453_134766499_134766999_134767054_134767309_134767355_134768409_134768464_134772789_134772835_134774858_134774913_134780101_134780147_134782666_134782721_134784988_134785097_134785994_134786049_134789154_134789209_134795081_134795127_134795261_134795316_134796373_134796419_134796847_134796902_134798407_134798462_134801953_134802008_134802887_134802996_134804974_134805065_134805160_134805215_134806188_134806297_134809182_134809291_134810254_134810309_134811338_134811393_134811491_134811600_134812448_134812503_134812604_134812713_134813982_134814037_134814796_134814905_134815575_134815630_134815934_134815989_134817025_134817080_134817777_134817832_134818655_134818764_134818847_134818902_134818999_134819054_134820115_134820224_134822096_134822151_134822997_134823034_134823415_134823470_134824599_134824856_134825791_134825905_134829975_134830045_134834970_134835205_134842156
H1_mix_00086389	chr9	+	1013	4	FSM	ENSG00000130558.20	ENST00000277415.15	1014	4	0	1	0	-1	multi-exon	FALSE	canonical	3	102	junction_1	97.7036335045939	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGTGTTCTGAGGACTG	78	False	NA	12	True	AATAAA	-16	NA	135075421	135098106	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_135075803_135090194_135090345_135095863_135096020_135097780
H1_mix_00086390	chr9	+	2591	6	FSM	ENSG00000130558.20	ENST00000252854.8	2591	6	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	67.5899400798669	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGCTTCACTTGTCA	15	False	NA	11	True	AATAAA	-13	NA	135075519	135121178	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_135075803_135090194_135090345_135095863_135096020_135098285_135098506_135106748_135106856_135119503
H1_mix_00086391	chr9	+	1149	4	FSM	ENSG00000130558.20	ENST00000392991.8	1057	4	-51	-41	-45	-1	multi-exon	FALSE	canonical	3	114	junction_3	82.3825763671475	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGTGTTCTGAGGACTG	676	False	NA	12	True	AATAAA	-16	NA	135087622	135098106	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_135088140_135090194_135090345_135095863_135096020_135097780
H1_mix_00086392	chr9	+	2818	6	FSM	ENSG00000130558.20	ENST00000371793.8	2782	6	-38	2	-38	0	multi-exon	FALSE	canonical	3	199	junction_1	42.4951761968344	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGCTTCACTTGTCA	683	False	NA	11	True	AATAAA	-13	NA	135087629	135121178	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_135088140_135090194_135090345_135095863_135096020_135098285_135098506_135106748_135106856_135119503
H1_mix_00086393	chr9	+	5187	5	NIC	ENSG00000196422.11	novel	936	5	NA	NA	-214	-1	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	53.9785837161369	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTTACTGTTCTTTTTAAA	NA	False	NA	15	True	AATAAA	-15	NA	135479448	135488891	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_135479725_135482682_135482816_135483351_135483554_135483949_135484083_135484448
H1_mix_00086394	chr9	+	4956	4	FSM	ENSG00000196422.11	ENST00000356818.7	4951	4	-6	1	-6	-1	multi-exon	FALSE	canonical	3	114	junction_1	18.7320284243028	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTTACTGTTCTTTTTAAA	-16	True	NA	15	True	AATAAA	-15	NA	135479775	135488891	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_135480023_135482682_135482816_135483949_135484083_135484448
H1_mix_00086395	chr9	+	5202	3	ISM	ENSG00000196422.11	ENST00000356818.7	4951	4	108	7	108	-7	intron_retention	FALSE	canonical	3	114	junction_1	2.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGGCGTTACTGTTCTT	98	False	NA	9	True	AATAAA	-9	NA	135479889	135488885	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_135480023_135482682_135482816_135483949
H1_mix_00086396	chr9	+	5130	3	FSM	ENSG00000196422.11	ENST00000401470.3	4769	3	-362	1	319	0	multi-exon	FALSE	canonical	3	34	junction_1	61	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTACTGTTCTTTTTAAAT	3209	False	NA	16	True	AATAAA	-16	NA	135483000	135488892	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_135483554_135483949_135484083_135484448
H1_mix_00086397	chr9	+	1458	4	FSM	ENSG00000122140.11	ENST00000241600.10	1458	4	0	0	0	0	multi-exon	FALSE	canonical	3	519	junction_1	42.5910788780937	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGAGTTTGGGGCTCT	-11	True	NA	12	True	AATAAA	-22	NA	135500681	135504671	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_135500754_135500997_135501124_135501843_135501974_135503541
H1_mix_00086399	chr9	+	2145	3	FSM	ENSG00000148386.10	ENST00000554343.1	798	3	-806	-541	-806	2	multi-exon	FALSE	canonical	3	15	junction_1	5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGTGACTTTGTGGGTTA	1105	False	NA	30	True	AATAAA	-20	NA	135664415	135666963	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_135665356_135665650_135665753_135665860
H1_mix_00086400	chr9	+	1602	9	FSM	ENSG00000160360.13	ENST00000616132.4	2270	9	-50	718	-50	-718	multi-exon	TRUE	canonical	3	84	junction_4	7.45716936913733	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGCCAGTTCTTCTTGGC	-4	True	NA	NA	False	NA	NA	NA	136327425	136341118	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136327764_136334446_136334669_136335965_136336102_136336920_136337073_136337440_136337565_136337845_136337962_136338554_136338711_136339706_136339816_136340869
H1_mix_00086401	chr9	+	3566	14	FSM	ENSG00000160360.13	ENST00000440944.6	3566	14	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_12	8.82841029870989	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCCGTATGGGCTTAG	1	True	NA	17	True	AATAAA	-15	NA	136327538	136359601	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136327764_136334446_136334669_136335965_136336102_136336920_136337073_136337440_136337565_136337845_136337962_136338554_136338711_136339706_136339816_136340869_136340994_136348696_136348768_136349586_136349764_136355689_136355847_136356341_136356551_136358013
H1_mix_00086403	chr9	+	2103	13	FSM	ENSG00000165688.12	ENST00000371717.8	2086	13	-17	0	0	0	multi-exon	FALSE	canonical	3	795	junction_6	100.902145941281	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACGGTGTTTTCCTTCTCG	-3	True	NA	27	True	AATAAA	-19	NA	136410640	136423761	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136410740_136411996_136412200_136412489_136412570_136412809_136412893_136414552_136414648_136416290_136416392_136416950_136417215_136418016_136418110_136418554_136418674_136418827_136418919_136419043_136419107_136421831_136421977_136423094
H1_mix_00086404	chr9	+	516	3	FSM	ENSG00000165688.12	ENST00000619192.4	416	3	-19	-81	-16	81	multi-exon	FALSE	canonical	3	1069	junction_2	56	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTTTTAAGTTAAAAGATAA	NA	False	NA	NA	False	AATAAA	-33	NA	136410624	136412687	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136410740_136411996_136412200_136412489
H1_mix_00086407	chr9	+	1332	9	FSM	ENSG00000172889.16	ENST00000371698.3	1282	9	-50	0	-46	0	multi-exon	FALSE	canonical	3	335	junction_1	125.708927188963	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTGTCAGTGGATGG	966	False	NA	11	True	AATAAA	-13	NA	136665741	136672678	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136665818_136668240_136668363_136668556_136668674_136669605_136669722_136669913_136670010_136670168_136670331_136670949_136671015_136671925_136672089_136672263
H1_mix_00086408	chr9	+	2358	5	FSM	ENSG00000165716.11	ENST00000371692.9	2358	5	0	0	0	0	multi-exon	FALSE	canonical	3	413	junction_4	53.5770473243907	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGGGTCTTAGGTTCCAG	14	True	NA	34	True	AATAAA	-40	NA	136712571	136724742	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136712729_136717576_136717712_136721920_136722029_136722124_136722302_136722961
H1_mix_00086409	chr9	+	5539	3	FSM	ENSG00000165716.11	ENST00000371691.5	2410	3	-2069	-1060	-2069	368	multi-exon	FALSE	canonical	3	413	junction_2	70.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTGAAAAACAAACAAGGACA	6258	False	NA	NA	False	NA	NA	NA	136718815	136725110	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136722029_136722124_136722302_136722961
H1_mix_00086410	chr9	+	863	5	FSM	ENSG00000244187.8	ENST00000465017.5	839	5	-24	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	215.650759330914	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAAGTTTCCACCTGACC	-12	True	NA	-19	True	AATAAA	-19	NA	136791343	136793256	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136791425_136791625_136791778_136791946_136792031_136792250_136792359_136792818
H1_mix_00086411	chr9	+	839	5	FSM	ENSG00000244187.8	ENST00000290079.9	839	5	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_1	67.2997028225237	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAAACCTTTATTACCCT	-12	True	NA	42	True	AAAACA	-30	NA	136791343	136793317	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136791425_136791710_136791778_136791946_136792031_136792250_136792359_136792818
H1_mix_00086413	chr9	+	683	4	FSM	ENSG00000244187.8	ENST00000483187.5	683	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	254.467199370676	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAAGTTTCCACCTGACC	16	True	NA	-19	True	AATAAA	-19	NA	136791371	136793256	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136791425_136791946_136792031_136792250_136792359_136792818
H1_mix_00086418	chr9	+	1580	8	FSM	ENSG00000196642.19	ENST00000371671.9	1580	8	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_7	218.247846378789	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAGTCGTCAGATATTT	8	True	NA	20	True	AATAAA	-15	NA	136807942	136834340	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136808327_136823524_136823660_136825778_136825827_136828493_136828547_136829392_136829485_136831720_136831862_136832264_136832371_136833719
H1_mix_00086419	chr9	+	3102	15	FSM	ENSG00000196642.19	ENST00000371663.10	3078	15	-24	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	180.080438376061	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCACTCTGCGTGTGTCTG	8	True	NA	17	True	CATAAA	-10	NA	136807942	136841177	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136808327_136823524_136823660_136825778_136825827_136828493_136828547_136829392_136829485_136831720_136831862_136832261_136832371_136835741_136835846_136837345_136837663_136837861_136838016_136838908_136839122_136839221_136839487_136839693_136839866_136840153_136840213_136840321
H1_mix_00086420	chr9	+	2764	14	FSM	ENSG00000196642.19	ENST00000484471.6	2746	14	-18	0	0	0	multi-exon	FALSE	canonical	1	22	junction_10	185.893906244121	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCGTGTGTCTGTTCTT	8	True	NA	22	True	CATAAA	-15	NA	136807942	136841182	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136808327_136823524_136823660_136825778_136825827_136828493_136828547_136829392_136829485_136831720_136831862_136832264_136832371_136835741_136835846_136837345_136837663_136837861_136837981_136839313_136839487_136839693_136839866_136840153_136840213_136840321
H1_mix_00086421	chr9	+	3109	15	FSM	ENSG00000196642.19	ENST00000311502.12	3104	15	-5	0	0	0	multi-exon	FALSE	canonical	3	502	junction_8	83.0282715558443	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGTCTGTTCTTCTGCC	8	True	NA	27	True	CATAAA	-20	NA	136807942	136841187	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136808327_136823524_136823660_136825778_136825827_136828493_136828547_136829392_136829485_136831720_136831862_136832264_136832371_136835741_136835846_136837345_136837663_136837861_136838016_136838908_136839122_136839221_136839487_136839693_136839866_136840153_136840213_136840321
H1_mix_00086422	chr9	+	3328	6	FSM	ENSG00000196642.19	ENST00000435930.1	3328	6	0	0	0	0	multi-exon	FALSE	canonical	3	523	junction_1	43.050667822927	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAGAAGAAGAAAAAAGG	NA	False	NA	-14	True	NA	NA	NA	136835170	136840185	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136837663_136837861_136838016_136838908_136839122_136839221_136839487_136839693_136839866_136840153
H1_mix_00086423	chr9	+	1316	3	FSM	ENSG00000054148.18	ENST00000492540.5	1316	3	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_2	1294	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCGGCTTCTGAACTCT	310	False	NA	13	True	ATTAAA	-13	NA	136849090	136851022	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136849591_136850012_136850561_136850754
H1_mix_00086424	chr9	+	577	3	FSM	ENSG00000054148.18	ENST00000247665.12	577	3	0	0	0	0	multi-exon	FALSE	canonical	3	2758	junction_2	84	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGGCTTCTGAACTCTGT	-5	True	NA	15	True	ATTAAA	-15	NA	136849408	136851024	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136849591_136850012_136850138_136850754
H1_mix_00086426	chr9	+	619	4	FSM	ENSG00000054148.18	ENST00000497413.1	618	4	-1	0	0	0	multi-exon	FALSE	canonical	3	134	junction_2	1270.81006536076	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTTCTGAACTCTGTCCT	11	True	NA	18	True	ATTAAA	-18	NA	136849424	136851027	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136849591_136850012_136850138_136850505_136850561_136850754
H1_mix_00086428	chr9	+	380	3	FSM	ENSG00000177943.14	ENST00000481327.1	380	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGGTGACCCACAGTGCCC	3167	False	NA	NA	False	NA	NA	NA	136855558	136856219	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136855620_136855731_136855849_136856017
H1_mix_00086430	chr9	+	2290	11	FSM	ENSG00000127191.18	ENST00000247668.7	2266	11	-24	0	-24	0	multi-exon	TRUE	canonical	3	108	junction_1	50.5787504788325	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTCAGTGGCATCCATT	-15	True	NA	12	True	ATTAAA	-14	NA	136886491	136926607	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136886542_136898712_136898929_136899593_136899673_136900421_136900521_136908069_136908232_136909919_136909995_136916540_136916616_136920233_136920516_136921037_136921216_136923851_136924001_136925682
H1_mix_00086431	chr9	+	2645	14	NNC	ENSG00000127191.18	novel	2266	11	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	114.447838303341	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTCAGTGGCATCCATT	-15	True	NA	12	True	ATTAAA	-14	NA	136886491	136926607	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_136886542_136889468_136889563_136889669_136889737_136890348_136890543_136898712_136898929_136899593_136899673_136900421_136900521_136908069_136908232_136909919_136909995_136916540_136916616_136920233_136920516_136921037_136921216_136923851_136924001_136925682
H1_mix_00086432	chr9	+	680	6	FSM	ENSG00000127191.18	ENST00000414589.1	680	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	118.170046966226	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTAAAGATGCCTGCGTG	2760	False	NA	NA	False	NA	NA	NA	136889534	136900517	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136889563_136889669_136889737_136890348_136890543_136898712_136898929_136899593_136899673_136900421
H1_mix_00086433	chr9	+	3708	4	ISM	ENSG00000127191.18	ENST00000247668.7	2266	11	32816	-1272	-1793	1272	3prime_fragment	FALSE	canonical	3	259	junction_2	7.76029781788188	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAATTGCCTGTTGATGTC	NA	False	NA	NA	False	NA	NA	NA	136919331	136927879	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_136920516_136921037_136921216_136923851_136924001_136925682
H1_mix_00086436	chr9	+	699	6	FSM	ENSG00000107317.13	ENST00000492068.2	754	6	55	0	24	0	multi-exon	FALSE	canonical	3	78	junction_4	9.93176721434811	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCACTCAGGCTTCATCC	695	False	NA	-39	True	NA	NA	NA	136978866	136981692	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136979133_136979222_136979300_136979945_136980063_136980182_136980285_136980832_136980856_136981578
H1_mix_00086437	chr9	+	392	2	FSM	ENSG00000107317.13	ENST00000462514.1	593	2	0	201	0	-201	multi-exon	FALSE	canonical	3	78	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCCACTCCATTCATTC	6	False	NA	NA	False	NA	NA	NA	136979915	136980855	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136980285_136980832
H1_mix_00086438	chr9	+	827	7	FSM	ENSG00000148362.11	ENST00000371620.4	808	7	-19	0	-19	0	multi-exon	FALSE	canonical	3	236	junction_2	72.8432487529825	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGGTGGGGCTCTGAC	-25	True	NA	23	True	AATAAA	-18	NA	136992402	136993976	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136992563_136992639_136992701_136992924_136992975_136993052_136993244_136993342_136993412_136993579_136993665_136993765
H1_mix_00086439	chr9	+	752	6	NIC	ENSG00000148362.11	novel	808	7	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	154.086209636035	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGCTCTGACTCCTGGCA	-3	True	NA	31	True	AATAAA	-26	NA	136992424	136993984	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_136992563_136992924_136992975_136993052_136993244_136993342_136993412_136993579_136993665_136993765
H1_mix_00086440	chr9	+	710	5	FSM	ENSG00000148362.11	ENST00000483807.5	705	5	-5	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	171.938942651163	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCCGCCACCACCTCCAC	14	True	NA	-72	True	NA	NA	NA	136992441	136993881	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136992563_136992924_136993244_136993342_136993412_136993579_136993665_136993765
H1_mix_00086441	chr9	+	1098	5	FSM	ENSG00000148362.11	ENST00000498095.4	1077	5	-21	0	0	0	multi-exon	FALSE	canonical	3	316	junction_1	48.2804308182932	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGCTCTGACTCCTGGCA	14	True	NA	31	True	AATAAA	-26	NA	136992441	136993984	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136992563_136992639_136993244_136993342_136993412_136993579_136993665_136993765
H1_mix_00086442	chr9	+	958	6	FSM	ENSG00000148362.11	ENST00000493968.5	958	6	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_2	58.3218655394356	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGGCTCTGGTGGGGCT	63	False	NA	18	True	AATAAA	-13	NA	136992490	136993971	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136992563_136992639_136992975_136993052_136993244_136993342_136993412_136993579_136993665_136993765
H1_mix_00086443	chr9	+	744	5	FSM	ENSG00000148362.11	ENST00000467845.5	744	5	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_1	80.3181175078201	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTCTGGTGGGGCTCTGA	212	False	NA	22	True	AATAAA	-17	NA	136992639	136993975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136992701_136992924_136993244_136993342_136993412_136993579_136993665_136993765
H1_mix_00086444	chr9	+	3349	9	FSM	ENSG00000197355.11	ENST00000409858.8	3349	9	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	7.72981241687015	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTACTCTGGCAAGTGCA	17	True	NA	30	True	AATAAA	-20	NA	137077516	137084538	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137077822_137078049_137078255_137078501_137078678_137078975_137079149_137079255_137079450_137080001_137080143_137080688_137080875_137081997_137082065_137082636
H1_mix_00086445	chr9	+	3198	7	FSM	ENSG00000197355.11	ENST00000360271.3	3201	7	0	3	0	-2	multi-exon	FALSE	canonical	3	28	junction_4	7.15114598430831	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCTACTCTGGCAAGTG	641	False	NA	28	True	AATAAA	-18	NA	137078140	137084536	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137078678_137078975_137079149_137079255_137079450_137080001_137080143_137080688_137080875_137081997_137082065_137082636
H1_mix_00086446	chr9	+	4412	4	FSM	ENSG00000197355.11	ENST00000474787.1	4412	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	2.44948974278318	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTACTCTGGCAAGTGCA	1099	False	NA	30	True	AATAAA	-20	NA	137078598	137084538	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137078678_137078975_137079149_137079255_137080875_137081997
H1_mix_00086447	chr9	+	2914	14	FSM	ENSG00000177239.16	ENST00000684138.1	2891	14	-23	0	1	0	multi-exon	FALSE	canonical	2	5	junction_3	112.651948666952	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCTTTTCGGTGGAGATA	951	False	NA	-14	True	NA	NA	NA	137086870	137109145	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137087219_137088074_137088184_137088267_137088399_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106124_137106316_137106688_137106810_137107249_137107448_137107530_137107663_137108387
H1_mix_00086450	chr9	+	2813	12	FSM	ENSG00000177239.16	ENST00000684229.1	2792	12	-21	0	0	0	multi-exon	FALSE	canonical	3	274	junction_8	21.865101066039	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGATAAAAGTTGATTTG	1016	False	NA	-2	True	NA	NA	NA	137086935	137109157	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137087219_137088074_137088184_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106124_137106316_137106688_137106810_137107249_137107663_137108387
H1_mix_00086453	chr9	+	2727	13	FSM	ENSG00000177239.16	ENST00000371589.9	2707	13	-20	0	0	0	multi-exon	FALSE	canonical	3	274	junction_8	21.0844861344913	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCGATGTCGCCTGTGTCT	-10	True	NA	24	True	GATAAA	-17	NA	137086964	137109183	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137087219_137088074_137088184_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106124_137106316_137106688_137106810_137107249_137107448_137107530_137107663_137108387
H1_mix_00086454	chr9	+	3452	12	FSM	ENSG00000177239.16	ENST00000535144.6	3432	12	-20	0	0	0	multi-exon	FALSE	canonical	3	274	junction_8	21.4861092932616	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCGATGTCGCCTGTGTCT	-10	True	NA	24	True	GATAAA	-17	NA	137086964	137109183	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137087219_137088074_137088184_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106124_137106316_137106688_137106810_137107249_137107448_137107530
H1_mix_00086455	chr9	+	4824	5	FSM	ENSG00000177239.16	ENST00000536349.6	4824	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	139.315065588758	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGCGATGTCGCCTGTGT	NA	False	NA	22	True	GATAAA	-15	NA	137102711	137109181	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137106316_137106688_137106810_137107274_137107448_137107530_137107663_137108387
H1_mix_00086456	chr9	+	5842	2	FSM	ENSG00000177239.16	ENST00000684336.1	5842	2	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCGATGTCGCCTGTGTCT	NA	False	NA	24	True	GATAAA	-17	NA	137102901	137109183	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137106810_137107249
H1_mix_00086457	chr9	+	1071	2	FSM	ENSG00000176101.12	ENST00000463511.1	570	2	-58	-443	-19	0	multi-exon	FALSE	canonical	3	41	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCGTGCCAGCCTGCTGC	3	True	NA	14	True	AATAAA	-16	NA	137188640	137190366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137189152_137189806
H1_mix_00086458	chr9	+	1194	2	FSM	ENSG00000176101.12	ENST00000459860.1	1170	2	-24	0	-24	0	multi-exon	FALSE	canonical	3	956	junction_1	0	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCCAGCCTGCTGCTTGC	-2	True	NA	18	True	AATAAA	-20	NA	137188635	137190370	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137189266_137189806
H1_mix_00086459	chr9	+	863	3	FSM	ENSG00000176101.12	ENST00000322310.10	863	3	0	0	0	0	multi-exon	FALSE	canonical	3	715	junction_1	120.5	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCGTGCCAGCCTGCTGC	5	True	NA	14	True	AATAAA	-16	NA	137188675	137190366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137188779_137189065_137189266_137189806
H1_mix_00086461	chr9	+	4837	14	FSM	ENSG00000188566.15	ENST00000684003.1	4817	14	-20	0	-5	0	multi-exon	FALSE	canonical	3	92	junction_9	17.1574677101504	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATTGTTACTACTTGTC	-33	True	NA	4	True	AATAAA	-15	NA	137205679	137219361	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137205913_137206231_137206310_137212501_137212600_137213779_137213879_137213966_137214069_137214203_137214414_137214569_137214692_137214797_137215019_137215094_137215203_137215406_137215522_137215658_137215806_137215898_137216018_137216093_137216189_137216271
H1_mix_00086463	chr9	+	1451	2	FSM	ENSG00000197191.6	ENST00000409414.2	1296	2	-155	0	-155	0	multi-exon	FALSE	canonical	3	19	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAATTCTTCTTTGCTGCA	6987	False	NA	6	True	AATAAA	-20	NA	137224479	137226310	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137225234_137225613
H1_mix_00086464	chr9	+	2081	3	FSM	ENSG00000188229.6	ENST00000604929.1	2035	3	-42	-4	-41	3	multi-exon	FALSE	canonical	3	978	junction_1	20	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTCGCTTTGCCCATTCC	9861	False	NA	24	True	ATTAAA	-18	NA	137241245	137243710	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137241418_137241720_137241830_137241910
H1_mix_00086465	chr9	+	1563	4	FSM	ENSG00000188229.6	ENST00000340384.5	1563	4	0	0	0	0	multi-exon	FALSE	canonical	3	978	junction_1	40.2326567189723	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTTTCGCTTTGCCCAT	0	True	NA	21	True	ATTAAA	-15	NA	137241286	137243707	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137241418_137241720_137241830_137241910_137242022_137242495
H1_mix_00086466	chr9	+	2540	13	FSM	ENSG00000188986.9	ENST00000343053.6	2540	13	0	0	0	0	multi-exon	FALSE	canonical	3	707	junction_3	87.2056955326505	200	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGAGGCTGAGATGTCTC	0	True	NA	15	True	AATAAA	-16	NA	137255326	137273542	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137255612_137255906_137256071_137256328_137256429_137256823_137257055_137263036_137263223_137264244_137264358_137265876_137265980_137266330_137266427_137266943_137267087_137267239_137267347_137272080_137272223_137272506_137272616_137272781
H1_mix_00086467	chr9	+	4176	2	FSM	ENSG00000198113.3	ENST00000357503.3	4171	2	-5	0	-5	0	multi-exon	TRUE	canonical	3	45	junction_1	0	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACCTACTGTTTGGTTTGT	0	True	NA	24	True	AATAAA	-20	NA	137277720	137282641	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137277908_137278652
H1_mix_00086469	chr9	+	582	2	FSM	ENSG00000182154.8	ENST00000371443.6	582	2	0	0	0	0	multi-exon	FALSE	canonical	3	1822	junction_1	0	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGGTGTTTGTTTTTTGGC	-26	True	NA	16	True	ATTAAA	-16	NA	137551878	137552555	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137551979_137552073
H1_mix_00086471	chr9	+	1557	8	FSM	ENSG00000197070.14	ENST00000371421.9	1556	8	-1	0	0	0	multi-exon	FALSE	canonical	3	231	junction_7	18.087090897733	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCCTCACCGGCCTCG	-1	True	NA	16	True	AATAAA	-17	NA	137605684	137615360	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137605836_137612895_137613007_137613459_137613511_137613614_137613770_137614031_137614215_137614298_137614476_137614558_137615001_137615073
H1_mix_00086472	chr9	+	1650	8	NIC	ENSG00000197070.14	novel	1556	8	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_4	88.4757547787724	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCCTCACCGGCCTCG	-11	True	NA	16	True	AATAAA	-17	NA	137605642	137615360	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_137605836_137612895_137613007_137613459_137613511_137613614_137613770_137613980_137614215_137614298_137614476_137614558_137615001_137615073
H1_mix_00086473	chr9	+	866	4	FSM	ENSG00000197070.14	ENST00000466367.5	866	4	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_2	17.4610678049451	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTCAGAGCCCCCGCCAG	-3	True	NA	NA	False	NA	NA	NA	137605728	137614211	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137605836_137612895_137613007_137613459_137613511_137613614
H1_mix_00086475	chr9	+	3185	5	FSM	ENSG00000197070.14	ENST00000491911.5	3185	5	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_1	15.0332963783729	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGGCCTCACCGGCCTC	5719	False	NA	15	True	AATAAA	-16	NA	137611450	137615359	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137613007_137613459_137613511_137613614_137614215_137614298_137614476_137614558
H1_mix_00086479	chr9	+	4466	25	NIC	ENSG00000181090.21	novel	5095	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_9	137.54413433109	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTGCTGATTCTGGTGTGG	-4	True	NA	10	True	AATAAA	-18	NA	137619004	137835741	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_137619050_137710966_137711031_137716625_137717183_137728348_137728530_137743391_137743529_137743901_137744091_137754170_137754292_137757879_137758012_137762674_137762821_137776617_137776845_137777881_137778056_137779634_137779718_137782290_137782398_137790847_137790971_137798812_137798915_137800879_137800985_137811460_137811616_137813005_137813174_137813385_137813531_137814430_137814509_137815946_137816063_137817438_137817526_137818059_137818139_137834348_137834525_137834772
H1_mix_00086480	chr9	+	5108	27	FSM	ENSG00000181090.21	ENST00000460843.6	5095	27	-13	0	0	0	multi-exon	TRUE	canonical	3	215	junction_4	83.9940474081348	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGTTTTTATTATGACAC	-17	True	NA	15	True	AATAAA	-20	NA	137618991	137836127	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137619050_137710966_137711031_137716625_137717183_137728348_137728530_137743370_137743529_137743901_137744091_137752330_137752409_137754170_137754292_137757879_137758012_137762674_137762821_137775108_137775253_137776617_137776845_137777881_137778056_137779634_137779718_137782290_137782398_137790847_137790971_137798812_137798915_137800879_137800985_137811460_137811616_137813005_137813174_137813385_137813531_137814430_137814509_137815946_137816063_137817438_137817526_137818059_137818139_137834348_137834525_137834772
H1_mix_00086481	chr9	+	5016	26	NIC	ENSG00000181090.21	novel	5095	27	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	131	junction_6	107.303725937173	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGTTTTTATTATGACAC	-3	True	NA	15	True	AATAAA	-20	NA	137619005	137836127	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_137619050_137710966_137711031_137716625_137717183_137728348_137728530_137743370_137743529_137743901_137744091_137754170_137754292_137757879_137758012_137762674_137762821_137775108_137775253_137776617_137776845_137777881_137778056_137779634_137779718_137782290_137782398_137790847_137790971_137798812_137798915_137800879_137800985_137811460_137811616_137813005_137813174_137813385_137813531_137814430_137814509_137815946_137816063_137817438_137817526_137818059_137818139_137834348_137834525_137834772
H1_mix_00086485	chr9	+	2593	4	FSM	ENSG00000181090.21	ENST00000475564.5	2782	4	189	0	173	0	multi-exon	FALSE	canonical	3	525	junction_2	14.0554457615387	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTACTTTAAATGGGGTT	NA	False	NA	2	True	AATAAA	-7	NA	137816529	137836114	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137817526_137818059_137818139_137834348_137834525_137834772
H1_mix_00086488	chr9	-	2611	10	NNC	ENSG00000181404.17	novel	1873	11	NA	NA	3792	-50	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_3	65.0469915608025	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGAAACCAACAGTGTGC	NA	False	NA	-10	True	AATAAA	-7	NA	25947	14524	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_14941_15080_15150_15908_16062_16717_16877_16968_17167_17343_17480_17718_17856_18027_18175_18380_18480_24850
H1_mix_00086489	chr9	-	2558	4	FSM	ENSG00000172785.18	ENST00000464198.5	721	4	-1444	-393	-1444	20	multi-exon	FALSE	canonical	3	1438	junction_1	159.936098350421	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTGGCTGAAGGAGTGT	NA	False	NA	NA	False	AATAAA	-40	NA	125191	121017	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_121574_121960_122091_123216_123283_123385
H1_mix_00086490	chr9	-	1793	16	FSM	ENSG00000172785.18	ENST00000314367.14	1771	16	0	-22	0	0	multi-exon	FALSE	canonical	3	306	junction_15	489.133583208332	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGATGTTGACGACCTGA	7	False	NA	NA	False	AATAAA	-20	NA	179047	121037	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_121574_121960_122091_123216_123283_123385_123455_134978_135031_146101_146159_152033_152079_154708_154796_156480_156528_162431_162470_163977_164038_172080_172173_173269_173367_175697_175785_177722_177821_178815
H1_mix_00086491	chr9	-	1931	15	FSM	ENSG00000172785.18	ENST00000356521.8	1706	15	-18	-207	12	207	multi-exon	FALSE	canonical	3	568	junction_8	397.077152838239	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTCGCTTTATTAGTT	NA	False	NA	NA	False	NA	NA	NA	179076	120830	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_121574_121960_122091_123216_123283_123385_123455_134978_135031_146101_146159_152033_152079_154708_154796_156480_156528_162431_162470_163977_164038_172080_172173_173269_173367_175697_175785_178815
H1_mix_00086492	chr9	-	3326	6	FSM	ENSG00000172785.18	ENST00000611457.4	3324	6	0	-2	0	0	multi-exon	FALSE	canonical	3	1438	junction_1	152.924818129694	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGTCACCATTTTATG	NA	False	NA	NA	False	ATTAAA	-15	NA	148625	121088	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_121574_121960_122091_123216_123283_123385_123455_134978_135031_146101
H1_mix_00086493	chr9	-	1243	14	FSM	ENSG00000172785.18	ENST00000382447.8	1241	14	0	-2	0	0	multi-exon	FALSE	canonical	3	76	junction_5	516.201958092433	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAAGCATTTATTTATTA	33	False	NA	-4	True	AATAAA	-22	NA	179021	121406	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_121574_121960_122091_123216_123283_123385_123455_134978_135031_152033_152079_154708_154796_156480_156528_162431_162470_163977_164038_172080_172173_173269_173367_175697_175785_178815
H1_mix_00086494	chr9	-	1807	4	FSM	ENSG00000172785.18	ENST00000382389.5	1807	4	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_3	698.90978594443	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAGGAAAAGTACTCGG	31	False	NA	NA	False	ATTAAA	-39	NA	179023	171952	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_173367_175697_175785_177722_177821_178815
H1_mix_00086495	chr9	-	1731	3	FSM	ENSG00000172785.18	ENST00000382393.2	1731	3	0	0	0	0	multi-exon	FALSE	canonical	3	1645	junction_2	77	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAGGAAAAGTACTCGG	9	False	NA	NA	False	ATTAAA	-39	NA	179045	171952	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_173367_175697_175785_178815
H1_mix_00086496	chr9	-	1087	4	FSM	ENSG00000236404.12	ENST00000691704.1	806	4	-281	0	-281	0	multi-exon	FALSE	canonical	3	25	junction_2	2.62466929133727	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGATTTCCTTATCTTC	-8	True	NA	0	True	AATAAA	-25	NA	2621702	2535651	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_2536016_2536358_2536454_2539398_2539553_2621228
H1_mix_00086497	chr9	-	2198	18	FSM	ENSG00000080608.10	ENST00000397885.3	2187	18	0	-11	0	11	multi-exon	FALSE	canonical	3	777	junction_9	45.8259079651506	182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCTGTTACACTGAGTAG	-7	True	NA	-9	True	TATAAA	-41	NA	2844095	2804140	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_2804464_2807813_2807905_2810343_2810432_2811360_2811584_2812219_2812363_2820017_2820099_2823780_2823835_2824716_2824816_2827072_2827152_2828674_2828779_2829773_2829949_2830961_2831029_2831250_2831345_2833356_2833433_2834030_2834167_2837179_2837402_2838425_2838518_2844044
H1_mix_00086498	chr9	-	367	1	FSM	ENSG00000236496.2	ENST00000411761.2	986	1	129	490	129	-490	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCCAGCAACTGCTTTTG	NA	False	NA	NA	False	NA	NA	NA	2876298	2875931	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_2875900_2876300
H1_mix_00086499	chr9	-	9258	17	FSM	ENSG00000080298.16	ENST00000617270.5	9258	17	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_16	6.77195503529077	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGAAATGGCTTGGGTT	-9	True	NA	NA	False	AATAAA	-22	NA	3526001	3218296	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_3225281_3228846_3228890_3248031_3248186_3256990_3257200_3262934_3263085_3266207_3266306_3270370_3270526_3271002_3271119_3275499_3275613_3277339_3277462_3288130_3288251_3293076_3293259_3301545_3301621_3330258_3330518_3346666_3346765_3395471_3395597_3525746
H1_mix_00086500	chr9	-	335	2	NNC	ENSG00000273061.2	novel	256	2	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCTAGTGAAATCCTTAT	-33	True	NA	-5	True	AATAAA	-15	NA	4679493	4676599	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_4676750_4679308
H1_mix_00086501	chr9	-	463	2	FSM	ENSG00000273061.2	ENST00000607997.1	463	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTCCATGTGTTTAGA	5547	False	NA	NA	False	AATAAA	-16	NA	4679502	4678818	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_4679166_4679386
H1_mix_00086502	chr9	-	4219	5	FSM	ENSG00000147853.17	ENST00000381809.8	4219	5	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_4	23.4200768572607	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCCAGCACTGTGTCAT	-6	True	NA	-7	True	AATAAA	-21	NA	4741202	4709555	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_4713097_4718418_4718538_4719134_4719308_4722505_4722626_4740936
H1_mix_00086503	chr9	-	741	2	ISM	ENSG00000107014.9	ENST00000416837.1	733	3	185	-20	185	8	3prime_fragment	FALSE	canonical	3	61	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTTTTATTAACAGCATG	469	False	NA	-18	True	ATTAAA	-31	NA	5304247	5299855	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_5300445_5304095
H1_mix_00086504	chr9	-	833	2	FSM	ENSG00000107018.8	ENST00000223862.2	1009	2	180	-4	180	4	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGGACCAAAATGTTTTT	182	False	NA	NA	False	AATACA	-22	NA	5339696	5334925	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_5335598_5339535
H1_mix_00086506	chr9	-	1101	5	NIC	ENSG00000107020.10	novel	981	6	NA	NA	-46	4	combination_of_known_splicesites	FALSE	canonical	3	19	junction_4	146.624307329992	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCCAGCTGCTCTCATTT	-1	True	NA	-2	True	AATAAA	-24	NA	5437971	5357966	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_5358361_5361077_5361188_5361757_5361889_5436568_5436695_5437631
H1_mix_00086507	chr9	-	894	5	NIC	ENSG00000107020.10	novel	981	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	62	junction_3	111.757270457004	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATGCCCAGCTGCTCTC	-4	True	NA	-6	True	AATAAA	-20	NA	5437925	5357970	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_5358361_5361077_5361188_5361757_5361889_5436568_5436695_5437788
H1_mix_00086508	chr9	-	1087	6	NIC	ENSG00000107020.10	novel	981	6	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_5	115.111076791072	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATGCCCAGCTGCTCTC	-14	True	NA	-6	True	AATAAA	-20	NA	5437874	5357970	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_5358361_5361077_5361188_5361757_5361889_5431896_5431984_5436568_5436695_5437631
H1_mix_00086510	chr9	-	5388	15	FSM	ENSG00000099219.15	ENST00000339450.10	5377	15	0	-11	0	0	multi-exon	TRUE	canonical	3	102	junction_5	36.06661919848	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTTTAACTGAAAAACAGA	-35	True	NA	-18	True	AATAAA	-24	NA	5833117	5784560	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_5787309_5787429_5787594_5797816_5797933_5798805_5799009_5801175_5801329_5805026_5805218_5805610_5805786_5810010_5810232_5811110_5811324_5812124_5812218_5812888_5813036_5823895_5824002_5825091_5825220_5830726_5831029_5832689
H1_mix_00086511	chr9	-	4945	13	FSM	ENSG00000099219.15	ENST00000691251.1	5000	13	66	-11	4	0	multi-exon	FALSE	canonical	3	57	junction_5	42.9279111482909	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGGTATCTTTTTAAC	31	True	NA	-29	True	AATAAA	-13	NA	5833051	5784571	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_5787309_5787429_5787594_5797816_5797933_5798805_5799009_5801175_5801329_5810010_5810232_5811110_5811324_5812124_5812218_5812888_5813036_5823895_5824002_5825091_5825220_5830726_5831029_5832689
H1_mix_00086512	chr9	-	6898	7	FSM	ENSG00000183354.12	ENST00000381461.6	6884	7	0	-14	0	14	multi-exon	FALSE	canonical	2	2	junction_3	4.50924975282289	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCATTTTTAACGTGTGTT	7851	False	NA	-4	True	AATAAA	-28	NA	6007787	5919007	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_5923310_5924657_5924846_5929043_5929160_5954015_5954096_5968018_5969437_5988344_5988546_6007194
H1_mix_00086513	chr9	-	7669	8	FSM	ENSG00000183354.12	ENST00000399933.8	7669	8	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	3.50509832753866	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTGTTTGAATACCAT	0	True	NA	-18	True	AATAAA	-14	NA	6008482	5919021	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_5923310_5924657_5924846_5929043_5929160_5944870_5944961_5954015_5954096_5968018_5969437_5988344_5988546_6007194
H1_mix_00086514	chr9	-	4606	1	FSM	ENSG00000137040.10	ENST00000259569.6	4600	1	0	-6	0	6	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCTGGAACTTCTTTT	-4	True	NA	-1	True	AATAAA	-37	NA	6015624	6011018	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_6011000_6015600
H1_mix_00086515	chr9	-	3468	2	FSM	ENSG00000137040.10	ENST00000485372.1	1000	2	5	-2473	5	0	multi-exon	FALSE	canonical	3	22	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTATTGTGTCTGGAACT	13	True	NA	-7	True	AATAAA	-31	NA	6015607	6011024	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_6014357_6015471
H1_mix_00086517	chr9	-	3856	25	FSM	ENSG00000178445.10	ENST00000321612.8	3843	25	2	-15	2	15	multi-exon	TRUE	canonical	0	0	junction_4	128.406553787396	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTACTTTATAGTTTTAC	-9	True	NA	14	True	AATAAA	-32	NA	6645727	6532451	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_6533161_6534707_6534789_6536063_6536237_6540050_6540147_6550802_6550915_6553367_6553510_6554668_6554782_6556152_6556303_6558558_6558685_6565353_6565430_6587140_6587284_6588400_6588443_6588617_6588703_6589194_6589293_6592142_6592224_6592850_6592991_6595013_6595120_6602108_6602206_6604587_6604785_6605130_6605279_6606591_6606670_6610191_6610357_6620183_6620320_6644613_6644693_6645244
H1_mix_00086518	chr9	-	2670	4	FSM	ENSG00000178445.10	ENST00000639461.1	2674	4	8	-4	8	0	multi-exon	FALSE	canonical	3	579	junction_3	55.8410442436585	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATTAGTATTCTAATAAA	NA	False	NA	-37	True	NA	NA	NA	6541808	6532502	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_6533161_6534707_6534789_6536063_6536237_6540050
H1_mix_00086519	chr9	-	1397	1	FSM	ENSG00000230207.1	ENST00000413888.1	1276	1	-37	-84	-37	84	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTGAGAAACAAACAAACAAA	15	False	NA	NA	False	AATAAA	-19	NA	7478357	7476960	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_7477000_7478400
H1_mix_00086520	chr9	-	650	3	NNC	ENSG00000137038.8	novel	458	3	NA	NA	0	54093	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGAAGGGTTTTTTTTTTT	-2	True	NA	NA	False	CATAAA	-35	NA	7799778	7742406	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_7742433_7798343_7798638_7799448
H1_mix_00086521	chr9	-	693	3	NNC	ENSG00000137038.8	novel	458	3	NA	NA	-55	54093	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	469	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGAAGGGTTTTTTTTTTT	NA	False	NA	NA	False	CATAAA	-35	NA	7799833	7742406	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_7742433_7798343_7798638_7799460
H1_mix_00086522	chr9	-	2465	2	FSM	ENSG00000137038.8	ENST00000358227.5	2456	2	0	-9	0	9	multi-exon	FALSE	canonical	3	938	junction_1	0	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGTTTGGTTCTTTCCA	-2	True	NA	NA	False	AATAAA	-29	NA	7799778	7796490	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_7798638_7799460
H1_mix_00086523	chr9	-	9507	32	NIC	ENSG00000153707.19	novel	10389	46	NA	NA	38	2	intron_retention	FALSE	canonical	3	20	junction_18	14.438790394424	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCCTTTGCTTTTGTCC	918	False	NA	-28	True	AATAAA	-20	NA	8857738	8314243	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_8317943_8319830_8319967_8331581_8331737_8338921_8339048_8340342_8340470_8341089_8341269_8341692_8341979_8375935_8376091_8376606_8376727_8389231_8389408_8404536_8404661_8436591_8436690_8449724_8449838_8460410_8460572_8465465_8465676_8470994_8471086_8484118_8484379_8485226_8485325_8485761_8486350_8492861_8492980_8499646_8499841_8500753_8501060_8504260_8504406_8507300_8507435_8517847_8518430_8521276_8521547_8524924_8525036_8528590_8528780_8633316_8633459_8636698_8636845_8733779_8733947_8857637
H1_mix_00086524	chr9	-	9575	33	NIC	ENSG00000153707.19	novel	10389	46	NA	NA	0	2	intron_retention	FALSE	canonical	3	11	junction_18	15.6513527769966	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCCTTTGCTTTTGTCC	880	False	NA	-28	True	AATAAA	-20	NA	8857776	8314243	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_8317943_8319830_8319967_8331581_8331737_8338921_8339048_8340342_8340470_8341089_8341269_8341692_8341979_8375935_8376091_8376606_8376727_8389231_8389408_8404536_8404661_8436591_8436690_8449724_8449838_8460410_8460572_8465465_8465676_8470994_8471086_8484118_8484379_8485226_8485328_8485761_8486350_8492861_8492980_8497241_8497269_8499646_8499841_8500753_8501060_8504260_8504406_8507300_8507435_8517847_8518430_8521276_8521547_8524924_8525036_8528590_8528780_8633316_8633459_8636698_8636845_8733779_8733947_8857637
H1_mix_00086525	chr9	-	551	2	FSM	ENSG00000153707.19	ENST00000477552.1	551	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACGGCAAAGACTGCACC	6021	False	NA	NA	False	NA	NA	NA	8485636	8484237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_8484379_8485226
H1_mix_00086526	chr9	-	521	4	FSM	ENSG00000153707.19	ENST00000481079.1	521	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	2.16024689946929	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTTATGAATGTGTGGC	880	False	NA	NA	False	AATACA	-26	NA	8857776	8633389	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_8633459_8636698_8636845_8733779_8733947_8857637
H1_mix_00086527	chr9	-	866	1	FSM	ENSG00000214121.4	ENST00000449329.2	596	1	-173	-97	-173	97	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCAGCCGAACTGTGGTG	NA	False	NA	NA	False	AGTAAA	-14	NA	12973611	12972745	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_12972700_12973600
H1_mix_00086528	chr9	-	8020	48	NIC	ENSG00000107186.17	novel	7821	47	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_47	37.7266142086313	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGCAAGCATTTTTTTT	-7	True	NA	NA	False	AATAAA	-26	NA	13279692	13105705	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_13107112_13108935_13109060_13109951_13110065_13110635_13110741_13112023_13112147_13113010_13113055_13113930_13114022_13115247_13115335_13119501_13119650_13121738_13121933_13122086_13122171_13123152_13123299_13125215_13125391_13126515_13126591_13126679_13126773_13133823_13133905_13136091_13136183_13136711_13136804_13137956_13138154_13139986_13140150_13143465_13143565_13147547_13147659_13150510_13150689_13158017_13158111_13162690_13162796_13168365_13168565_13175751_13175876_13176135_13176418_13183417_13183586_13186269_13186387_13188783_13188994_13190113_13190300_13192130_13192296_13193166_13193314_13196120_13196231_13205035_13205108_13205915_13206100_13216773_13216863_13217179_13217295_13219558_13219769_13221371_13221501_13222232_13222447_13223570_13223711_13224373_13224584_13247634_13247802_13250299_13250373_13276573_13276772_13279399
H1_mix_00086529	chr9	-	7555	46	NNC	ENSG00000107186.17	novel	7821	47	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_45	25.0509604064186	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAGCAGCAAGCATTTT	-7	True	NA	NA	False	AATAAA	-22	NA	13279692	13105709	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_13107112_13108935_13109060_13109951_13110065_13110635_13110741_13112023_13112147_13113010_13113055_13113930_13114022_13115247_13115335_13119501_13119650_13121738_13121933_13122086_13122171_13123152_13123299_13125215_13125391_13126515_13126591_13126679_13126773_13133823_13133905_13136091_13136183_13136711_13136804_13137956_13138154_13139986_13140150_13147547_13147659_13150510_13150689_13158017_13158111_13162690_13162796_13168365_13168565_13175751_13175876_13176135_13176418_13183417_13183586_13186269_13186387_13188783_13188994_13190113_13190300_13192130_13192296_13193166_13193314_13196120_13196231_13205035_13205108_13205915_13206100_13216773_13216863_13217179_13217295_13219558_13219769_13221371_13221501_13222232_13222447_13223570_13223711_13224373_13224584_13247634_13247802_13250299_13250373_13279563
H1_mix_00086530	chr9	-	7731	46	FSM	ENSG00000107186.17	ENST00000541718.5	7603	46	-128	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	35.4226265137949	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAGCAGCAAGCATTTT	-7	True	NA	NA	False	AATAAA	-22	NA	13279692	13105709	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_13107112_13108935_13109060_13109951_13110065_13110635_13110741_13112023_13112147_13113010_13113055_13113930_13114022_13119501_13119650_13121738_13121933_13122086_13122171_13123152_13123299_13125215_13125391_13126515_13126591_13126679_13126773_13133823_13133905_13136091_13136183_13136711_13136804_13137956_13138154_13139986_13140150_13143465_13143565_13147547_13147659_13150510_13150689_13158017_13158111_13162690_13162796_13168365_13168565_13175751_13175876_13176135_13176418_13183417_13183586_13186269_13186387_13188783_13188994_13190113_13190300_13192130_13192296_13193166_13193314_13196120_13196231_13205035_13205108_13205915_13206100_13216773_13216863_13217179_13217295_13219558_13219769_13221371_13221501_13222232_13222447_13223570_13223711_13224373_13224584_13247634_13247802_13250299_13250373_13279399
H1_mix_00086534	chr9	-	1667	2	NNC	ENSG00000147862.18	novel	8198	9	NA	NA	38865	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCCTCATGTTTTATT	8256	False	NA	-1	True	AATAAA	-18	NA	14141927	14081847	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_14083490_14141902
H1_mix_00086535	chr9	-	8198	9	FSM	ENSG00000147862.18	ENST00000380959.7	8198	9	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	4.715334028465	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCCTCATGTTTTATT	8400	False	NA	-1	True	AATAAA	-18	NA	14313985	14081847	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_14088327_14120439_14120625_14125631_14125767_14146688_14146808_14150144_14150266_14155824_14155894_14179726_14179781_14306988_14307521_14313481
H1_mix_00086536	chr9	-	3129	10	FSM	ENSG00000147862.18	ENST00000397579.6	3129	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	5.45690184791497	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAATGAAAAAAA	11	True	NA	NA	False	NA	NA	NA	14314582	14087602	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_14088327_14102421_14102511_14120439_14120625_14125631_14125767_14146688_14146808_14150144_14150266_14155824_14155894_14179726_14179781_14306988_14307521_14313481
H1_mix_00086539	chr9	-	1330	1	FSM	ENSG00000272871.1	ENST00000610061.1	1269	1	-61	0	-61	0	mono-exon	FALSE	NA	NA	NA	NA	NA	264	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGCCTCTGTAGATACT	NA	False	NA	-3	True	AATAAA	-19	NA	14590126	14588796	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_14588800_14590100
H1_mix_00086540	chr9	-	9121	10	FSM	ENSG00000175893.12	ENST00000380916.9	9121	10	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_7	23.1900361745681	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGTTTTTATCCTCTTA	-3	True	NA	0	True	AATAAA	-18	NA	14693432	14611070	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_14619099_14619638_14619683_14639895_14640013_14658748_14658888_14662214_14662327_14672829_14672929_14674186_14674386_14680032_14680163_14690336_14690386_14693228
H1_mix_00086541	chr9	-	1231	2	FSM	ENSG00000147869.5	ENST00000380911.4	1231	2	0	0	0	0	multi-exon	FALSE	canonical	3	2799	junction_1	0	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATAAGCGAGACCATAAA	0	True	NA	9	True	NA	NA	NA	14722733	14719723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_14720387_14722165
H1_mix_00086542	chr9	-	962	4	ISM	ENSG00000164946.20	ENST00000427623.5	1421	11	26924	-215	26924	1	3prime_fragment	FALSE	canonical	1	22	junction_1	6.59966329107444	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGGTTTGTTTATTCCA	NA	False	NA	-46	True	AATAAA	-20	NA	14747237	14737150	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_14737596_14740148_14740235_14746352_14746469_14746922
H1_mix_00086543	chr9	-	7464	37	FSM	ENSG00000164946.20	ENST00000380880.4	7566	37	102	0	102	0	multi-exon	FALSE	canonical	1	1	junction_28	7.446672552138	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAAGGTTTGTTTATTCC	7944	False	NA	-47	True	AATAAA	-19	NA	14910326	14737151	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_14737596_14740148_14740235_14746352_14746469_14746922_14747052_14747263_14747429_14747680_14747729_14748400_14748640_14750126_14750277_14756373_14756447_14759771_14759902_14769723_14769869_14770604_14770807_14775788_14776204_14784369_14784635_14788918_14789115_14792742_14792885_14797497_14797643_14801651_14801875_14804955_14805153_14806660_14806847_14807939_14808135_14812811_14813065_14816777_14816872_14819233_14819443_14823159_14823328_14824024_14824116_14824795_14824993_14841446_14841590_14842315_14842661_14845959_14846092_14848664_14848774_14851283_14851608_14857552_14857750_14859182_14859485_14863808_14863904_14868743_14869245_14909913
H1_mix_00086544	chr9	-	701	3	FSM	ENSG00000164946.20	ENST00000497634.2	701	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	1	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACATGTATCTTATAACAT	NA	False	NA	NA	False	NA	NA	NA	14792884	14784271	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_14784635_14788918_14789115_14792742
H1_mix_00086545	chr9	-	998	1	FSM	ENSG00000214110.3	ENST00000397561.3	998	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTTCTGATGTCATATCA	350	False	NA	NA	False	AAAAAG	-15	NA	14922334	14921336	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_14921300_14922300
H1_mix_00086546	chr9	-	10483	20	FSM	ENSG00000155158.20	ENST00000512701.6	10483	20	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	10.3765663971232	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGTCTTATTCTGGTTG	NA	False	NA	-4	True	AATAAA	-16	NA	15307360	15163621	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_15172110_15175018_15175136_15177696_15177815_15182306_15182416_15185279_15185407_15186943_15187036_15187970_15188133_15189573_15189634_15189724_15189793_15190553_15190663_15191189_15191256_15192589_15192696_15199860_15199926_15203822_15203891_15210087_15210165_15211265_15211398_15214138_15214250_15225916_15226013_15267913_15267949_15307083
H1_mix_00086548	chr9	-	2189	2	NNC	ENSG00000155158.20	novel	10483	20	NA	NA	30	-55291	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTCTCATTGGGTTTTC	NA	False	NA	NA	False	TTTAAA	-36	NA	15307330	15304332	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_15306275_15307083
H1_mix_00086549	chr9	-	3342	16	FSM	ENSG00000164985.15	ENST00000380733.9	3342	16	0	0	0	0	multi-exon	FALSE	canonical	3	709	junction_15	444.363544859386	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGCTAGTAAATTACTTT	-4	True	NA	-30	True	ATTAAA	-17	NA	15510970	15464065	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_15465581_15466747_15466860_15468629_15468844_15468956_15469059_15469265_15469337_15469937_15469994_15472631_15472751_15474008_15474238_15478476_15478553_15479590_15479688_15486005_15486069_15486826_15486932_15489985_15490125_15506560_15506638_15510116_15510330_15510816
H1_mix_00086550	chr9	-	3364	16	FSM	ENSG00000164985.15	ENST00000380738.8	3364	16	0	0	0	0	multi-exon	FALSE	canonical	3	1232	junction_15	326.733054478559	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGCTAGTAAATTACTTT	165	False	NA	-30	True	ATTAAA	-17	NA	15510995	15464065	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_15465581_15466747_15466860_15468629_15468844_15468956_15469059_15469265_15469337_15469937_15469994_15472631_15472751_15474008_15474238_15478476_15478553_15479590_15479688_15486005_15486069_15486826_15486932_15489985_15490125_15506560_15506638_15510116_15510327_15510816
H1_mix_00086551	chr9	-	1966	11	FSM	ENSG00000164985.15	ENST00000380715.5	1966	11	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	773.453967602468	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGATTTTTAGATATTTTT	169	False	NA	0	True	AATAAA	-20	NA	15510991	15470635	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_15471312_15472631_15472751_15474008_15474238_15478476_15478553_15479590_15479688_15486005_15486069_15486826_15486932_15489985_15490125_15506560_15506638_15510116_15510327_15510816
H1_mix_00086552	chr9	-	1889	11	FSM	ENSG00000164985.15	ENST00000380716.8	1889	11	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_1	679.338472339084	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGATTTTTAGATATTTTT	166	False	NA	0	True	AATAAA	-20	NA	15510994	15470635	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_15471232_15472631_15472751_15474008_15474238_15478476_15478553_15479590_15479688_15486005_15486069_15486826_15486932_15489985_15490125_15506560_15506638_15510116_15510327_15510816
H1_mix_00086556	chr9	-	742	1	FSM	ENSG00000213362.3	ENST00000432137.1	551	1	-32	-159	-32	159	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCCCCCCCCCCCCCCGCC	171	False	NA	-4	True	AATAAA	-13	NA	15527715	15526973	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_15527000_15527700
H1_mix_00086557	chr9	-	12808	7	FSM	ENSG00000173068.18	ENST00000380672.9	12808	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	17.5023807904334	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTCTTACCTTTCTGAT	-1	True	NA	-1	True	ATTAAA	-18	NA	16870670	16409502	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_16419650_16435554_16437525_16552529_16552766_16582982_16583086_16727796_16727998_16738359_16738486_16870645
H1_mix_00086558	chr9	-	5732	6	NNC	ENSG00000173068.18	novel	12808	7	NA	NA	0	1890	at_least_one_novel_splicesite	TRUE	non_canonical	1	12	junction_1	21.6462467878383	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTCCTCTCAGCGTTC	-1	True	NA	-8	True	AATGAA	-17	NA	16727997	16416403	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_16418675_16418698_16419650_16435554_16437525_16552529_16552766_16582982_16583086_16727796
H1_mix_00086559	chr9	-	856	4	FSM	ENSG00000173068.18	ENST00000603713.5	1008	4	152	0	-16	0	multi-exon	FALSE	canonical	3	53	junction_1	7.40870359029762	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATTCCAGTACATAAACCC	321	False	NA	NA	False	AAAACA	-27	NA	16728013	16437224	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_16437525_16552529_16552766_16582982_16583086_16727796
H1_mix_00086560	chr9	-	688	4	FSM	ENSG00000173068.18	ENST00000486514.5	688	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	22.8375908439475	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCCTTGGCTGGACTCTG	1142	False	NA	NA	False	NA	NA	NA	16870843	16552579	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_16552766_16582982_16583086_16727796_16727998_16870645
H1_mix_00086561	chr9	-	519	3	FSM	ENSG00000173068.18	ENST00000468187.6	662	3	0	143	0	-97	multi-exon	FALSE	canonical	3	6	junction_1	27	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTGTCATTATGTCAATA	-1	True	NA	NA	False	NA	NA	NA	16727997	16579933	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_16580149_16582982_16583086_16727796
H1_mix_00086562	chr9	-	6325	17	FSM	ENSG00000147874.11	ENST00000380502.8	6323	17	0	-2	0	2	multi-exon	FALSE	canonical	3	103	junction_2	73.759083127097	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTGGAATTTCCTATATA	20	True	NA	-15	True	AATAAA	-17	NA	19102904	19053138	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_19056405_19057960_19059002_19060087_19060224_19063007_19063194_19063513_19063581_19070218_19070301_19076601_19076705_19078175_19078303_19080478_19080673_19082872_19083044_19086733_19086783_19087090_19087157_19089411_19089560_19093170_19093304_19094316_19094396_19096673_19096770_19102523
H1_mix_00086563	chr9	-	1902	8	FSM	ENSG00000147872.10	ENST00000276914.7	1897	8	0	-5	0	5	multi-exon	FALSE	canonical	3	231	junction_3	33.4352862608792	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTTCCATATGCTTTG	-3	True	NA	-10	True	AATAAA	-30	NA	19127492	19115755	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_19116650_19118320_19118456_19119649_19119832_19120879_19121166_19123564_19123648_19126113_19126310_19126396_19126449_19127418
H1_mix_00086565	chr9	-	712	1	FSM	ENSG00000232176.1	ENST00000397390.3	712	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGATCAGACTCACAAAAAA	NA	False	NA	NA	False	AATAAA	-2	NA	19201046	19200334	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_19200300_19201000
H1_mix_00086567	chr9	-	549	1	FSM	ENSG00000272842.1	ENST00000609609.1	560	1	9	2	9	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGTCTTCTCTCATCTTT	8298	False	NA	-3	True	AATAAA	-12	NA	19371936	19371387	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_19371400_19371900
H1_mix_00086568	chr9	-	1369	6	FSM	ENSG00000137154.13	ENST00000380394.9	1369	6	0	0	0	0	multi-exon	FALSE	canonical	3	21089	junction_1	2269.42958471947	8429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACAAAGTATGTACTTTT	-2	True	NA	NA	False	ACTAAA	-24	NA	19380236	19375714	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_19376389_19376493_19376652_19378367_19378515_19378707_19378919_19379486_19379619_19380189
H1_mix_00086569	chr9	-	480	2	FSM	ENSG00000137154.13	ENST00000498815.1	480	2	0	0	0	0	multi-exon	FALSE	canonical	3	21089	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTGACTTTTCATTG	3395	False	NA	-16	True	AATAAA	-17	NA	19376839	19376254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_19376389_19376493
H1_mix_00086570	chr9	-	1257	6	NNC	ENSG00000137154.13	novel	1369	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_5	9560.35558752916	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTGACTTTTCATTG	-2	True	NA	-16	True	AATAAA	-17	NA	19380236	19376254	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_19376389_19376493_19376652_19378367_19378515_19378707_19378919_19379486_19379619_19379761
H1_mix_00086571	chr9	-	1355	5	FSM	ENSG00000137154.13	ENST00000380384.5	1355	5	0	0	0	0	multi-exon	FALSE	canonical	3	21089	junction_1	2345.21006521804	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCAGACTCTGATCTCT	0	True	NA	-31	True	AATAAA	-2	NA	19380206	19376269	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_19376389_19376493_19376652_19378367_19378515_19378707_19378919_19379486
H1_mix_00086573	chr9	-	10380	10	NNC	ENSG00000155886.12	novel	10990	11	NA	NA	-20	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	3.82325567424117	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTATTGTTTTGTTTGGA	209	False	NA	-4	True	AATAAA	-15	NA	19789014	19507457	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_19516403_19520893_19521061_19528048_19528139_19550136_19550269_19573350_19573470_19576923_19577023_19619583_19619693_19622260_19622300_19786469_19787020_19788884
H1_mix_00086574	chr9	-	2170	9	ISM	ENSG00000155886.12	ENST00000286344.4	10899	10	2066	8528	2066	-8525	3prime_fragment	FALSE	canonical	1	3	junction_2	3.11999599358717	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTCCACCCTGCCTACT	2295	False	NA	NA	False	NA	NA	NA	19786928	19515979	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_19516403_19520893_19521061_19528048_19528139_19550136_19550269_19573350_19573470_19576923_19577023_19619583_19619693_19622260_19622300_19785936
H1_mix_00086575	chr9	-	4540	12	NNC	ENSG00000171843.17	novel	6724	11	NA	NA	-29	27234	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	8.84578622194192	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACATGTGCTATACATTTT	1148	False	NA	NA	False	NA	NA	NA	20622528	20314434	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_20314460_20343906_20346575_20353524_20353597_20354807_20354880_20360741_20360842_20363475_20363606_20365668_20365745_20413720_20414426_20448122_20448267_20456703_20456787_20620653_20620835_20622244
H1_mix_00086576	chr9	-	6695	11	FSM	ENSG00000171843.17	ENST00000380338.9	6724	11	0	29	0	-29	multi-exon	FALSE	canonical	3	24	junction_8	3.01496268633627	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAAAATACATTCAGTTT	3	True	NA	NA	False	NA	NA	NA	20622499	20341697	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_20346575_20353524_20353597_20354807_20354880_20360741_20360842_20363475_20363606_20365668_20365745_20413720_20414426_20448122_20448267_20456703_20456787_20620653_20620835_20622244
H1_mix_00086577	chr9	-	8270	7	FSM	ENSG00000188921.14	ENST00000495827.3	8277	7	7	0	7	0	multi-exon	FALSE	canonical	3	8	junction_2	4.72581562625261	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACATGTCAGAAATGTGT	1	True	NA	NA	False	AATAAA	-26	NA	21031633	20999508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_21007120_21008020_21008147_21011588_21011696_21015897_21016011_21026595_21026724_21029294_21029399_21031552
H1_mix_00086578	chr9	-	2851	3	Genic_Genomic	ENSG00000198642.7	novel	5740	1	NA	NA	8	5614	multi-exon	TRUE	canonical	1	7	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGAGTTTTTGATTAATT	-12	True	NA	-3	True	AATAAA	-18	NA	21335396	21324050	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_-_21324322_21329330_21329420_21332905
H1_mix_00086579	chr9	-	5661	1	FSM	ENSG00000198642.7	ENST00000359039.5	5740	1	-14	93	-14	-93	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGCAGGCATTTGTCAAA	NA	False	NA	NA	False	NA	NA	NA	21335418	21329757	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_21329800_21335400
H1_mix_00086580	chr9	-	2513	4	FSM	ENSG00000171889.6	ENST00000654736.1	2557	4	44	0	13	0	multi-exon	FALSE	canonical	3	9	junction_3	3.39934634239519	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTTTCCTTTACTGATT	-12	True	NA	NA	False	ATTAAA	-10	NA	21559856	21453801	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_21455945_21476898_21477036_21477168_21477293_21559747
H1_mix_00086581	chr9	-	1475	1	FSM	ENSG00000184995.7	ENST00000448696.4	1475	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	215	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTATTTTCATACAGG	8768	False	NA	NA	False	AATAAA	-27	NA	21482313	21480838	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_21480800_21482300
H1_mix_00086582	chr9	-	1100	1	FSM	ENSG00000265194.1	ENST00000581788.1	3017	1	2506	-589	2506	589	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGATTTCAATATGGTAT	NA	False	NA	NA	False	NA	NA	NA	21859420	21858320	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_21858300_21859400
H1_mix_00086583	chr9	-	974	3	FSM	ENSG00000147889.18	ENST00000304494.10	978	3	0	4	0	-4	multi-exon	FALSE	canonical	3	25	junction_2	9	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATTTATTGTCAACATTT	7	True	NA	-4	True	AATAAA	-25	NA	21974857	21967755	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_21968243_21970901_21971209_21974677
H1_mix_00086585	chr9	-	1840	1	FSM	ENSG00000147883.12	ENST00000579591.1	1069	1	198	-969	198	514	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATTCCCAAAATGAACATA	3238	False	NA	NA	False	AATACA	-26	NA	22006073	22004233	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_22004200_22006100
H1_mix_00086587	chr9	-	3941	6	NIC	ENSG00000107105.15	novel	3789	7	NA	NA	28	216	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	32.5613267542955	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATGAGTAATTCTCACAG	-1	True	NA	NA	False	NA	NA	NA	23821820	23689887	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_23692885_23701378_23701605_23704917_23705072_23731021_23731126_23762005_23762250_23821604
H1_mix_00086588	chr9	-	3792	7	FSM	ENSG00000107105.15	ENST00000544538.5	3789	7	0	-3	0	0	multi-exon	FALSE	canonical	0	0	junction_6	36.5862755081131	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAGTGTGGTGAGTAGGT	-1	True	NA	-1	True	AATAAA	-17	NA	23821848	23690103	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_23692885_23693447_23693487_23701378_23701605_23704917_23705072_23731021_23731126_23762005_23762250_23821604
H1_mix_00086589	chr9	-	1344	1	Genic_Genomic	ENSG00000107105.15	novel	NA	NA	NA	NA	-647	-13634	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCTGAACCTCTCCATC	6758	False	NA	NA	False	NA	NA	NA	23780022	23778678	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_-_23778700_23780000
H1_mix_00086590	chr9	-	2043	1	FSM	ENSG00000198680.6	ENST00000358022.6	1476	1	-565	-2	-565	2	mono-exon	FALSE	NA	NA	NA	NA	NA	442	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGGTTGCGGCGAGTAT	NA	False	NA	-9	True	AATAAA	-22	NA	25679009	25676966	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_25677000_25679000
H1_mix_00086591	chr9	-	2789	6	FSM	ENSG00000120159.13	ENST00000333916.8	2789	6	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_5	18.2909813842779	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGTGTGTCTGTTCTAC	-7	True	NA	-2	True	ATTAAA	-18	NA	26892802	26840684	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_26842648_26861065_26861140_26884809_26884886_26886103_26886189_26887312_26887514_26892412
H1_mix_00086592	chr9	-	3287	6	FSM	ENSG00000120159.13	ENST00000625311.1	1532	6	-704	-1051	-343	0	multi-exon	FALSE	canonical	3	64	junction_5	122.470567892862	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGTGTGTCTGTTCTAC	NA	False	NA	-2	True	ATTAAA	-18	NA	26893146	26840684	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_26842648_26861065_26861140_26884809_26884886_26886103_26886189_26887312_26887514_26892258
H1_mix_00086594	chr9	-	4727	14	FSM	ENSG00000137055.15	ENST00000397292.8	4724	14	0	-3	0	3	multi-exon	TRUE	canonical	3	303	junction_5	33.3408078404771	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATATACCCATTTCTTATT	5	True	NA	-2	True	AATAAA	-19	NA	26947242	26903368	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_26906077_26907833_26907999_26910337_26910440_26913878_26913948_26917096_26917166_26919309_26919530_26920226_26920385_26923177_26923348_26925824_26925961_26926392_26926561_26928099_26928221_26928307_26928409_26935012_26935207_26946896
H1_mix_00086595	chr9	-	4555	13	NIC	ENSG00000137055.15	novel	4724	14	NA	NA	4	-87	combination_of_known_junctions	FALSE	canonical	3	154	junction_4	67.715704726944	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATCATACATACTCTTTG	18	True	NA	-13	True	ATTAAA	-8	NA	26947229	26903458	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_26906077_26907833_26907999_26910337_26910440_26913878_26913948_26919309_26919530_26920226_26920385_26923177_26923348_26925824_26925961_26926392_26926561_26928099_26928221_26928307_26928409_26935012_26935207_26946896
H1_mix_00086596	chr9	-	2041	13	FSM	ENSG00000137055.15	ENST00000520884.5	2041	13	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_4	34.2818181483357	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAAGAAGTTTTATCTT	14	True	NA	-25	True	AATAAA	-23	NA	26947233	26907802	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_26907999_26910337_26910440_26913878_26913948_26917096_26917166_26919309_26919530_26920226_26920385_26923177_26923348_26925824_26925961_26926392_26926561_26928099_26928221_26928307_26928409_26935012_26935207_26946896
H1_mix_00086597	chr9	-	6487	4	FSM	ENSG00000120162.10	ENST00000262244.6	6487	4	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	11.5181016954473	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTCTGTCTTTTTTTAA	-36	True	NA	-3	True	AATAAA	-17	NA	27529814	27325208	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_27330617_27359033_27359237_27455132_27455749_27529554
H1_mix_00086598	chr9	-	4156	10	ISM	ENSG00000147894.17	ENST00000380003.8	3231	11	5374	-33	5341	33	3prime_fragment	FALSE	canonical	3	137	junction_5	19.0152635246946	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGATATTTGAAGACTGAT	5697	False	NA	30	True	AATATA	-45	NA	27568107	27546512	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_27548423_27548556_27548667_27550649_27550708_27556560_27556797_27558490_27558608_27560226_27560300_27561584_27561650_27562380_27562477_27565530_27565591_27566676
H1_mix_00086599	chr9	-	3231	11	FSM	ENSG00000147894.17	ENST00000380003.8	3231	11	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_10	22.8142499328819	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTTTCAGTTGTTCATT	-5	True	NA	-3	True	AATAAA	-17	NA	27573481	27546545	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_27548423_27548556_27548667_27550649_27550708_27556560_27556797_27558490_27558608_27560226_27560300_27561584_27561650_27562380_27562477_27565530_27565591_27566676_27567165_27573430
H1_mix_00086600	chr9	-	3277	11	FSM	ENSG00000147894.17	ENST00000619707.5	3338	11	61	0	14	0	multi-exon	FALSE	canonical	1	3	junction_10	55.6704589526618	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTTTCAGTTGTTCATT	-1	False	NA	-3	True	AATAAA	-17	NA	27573805	27546545	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_27548423_27548556_27548667_27550649_27550708_27556560_27556797_27558490_27558608_27560226_27560300_27561584_27561650_27562380_27562477_27565530_27565591_27566676_27567165_27573708
H1_mix_00086601	chr9	-	3218	11	ISM	ENSG00000147894.17	ENST00000673600.1	2318	12	22	10906	9	0	5prime_fragment	FALSE	canonical	3	11	junction_1	54.0119431237203	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTTTCAGTTGTTCATT	4	True	NA	-3	True	AATAAA	-17	NA	27573472	27546545	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_27548419_27548556_27548667_27550649_27550708_27556560_27556797_27558490_27558608_27560226_27560300_27561584_27561650_27562380_27562477_27565530_27565591_27566676_27567165_27573430
H1_mix_00086602	chr9	-	848	1	FSM	ENSG00000260412.1	ENST00000566293.1	6881	1	6002	31	6002	-31	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGACACAAAAATAAAATACT	NA	False	NA	NA	False	AAAACA	-23	NA	27938495	27937647	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_27937600_27938500
H1_mix_00086603	chr9	-	2673	2	ISM	ENSG00000174482.10	ENST00000379992.6	3044	6	657887	0	282933	0	3prime_fragment	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAATATTTTTTATACTTG	NA	False	NA	-3	True	AATAAA	-27	NA	28012398	27948077	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_27950707_28012354
H1_mix_00086605	chr9	-	572	1	FSM	ENSG00000232060.3	ENST00000419995.2	602	1	124	-94	124	94	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTTGTAAGATCTGGTG	NA	False	NA	NA	False	NA	NA	NA	30559357	30558785	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_30558800_30559400
H1_mix_00086608	chr9	-	4180	3	FSM	ENSG00000197579.8	ENST00000360538.7	4131	3	33	-82	0	82	multi-exon	FALSE	canonical	3	213	junction_2	37	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAGGATTGCCACTGAAC	51	False	NA	74	True	GATAAA	-16	NA	32552553	32540461	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32544327_32550773_32550969_32552433
H1_mix_00086609	chr9	-	1361	4	FSM	ENSG00000165264.11	ENST00000379847.8	1361	4	0	0	0	0	multi-exon	FALSE	canonical	3	2366	junction_1	167.286181935827	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGAATTTTATTTTTA	-9	True	NA	-7	True	AATAAA	-14	NA	32573159	32553000	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32553945_32558909_32558955_32570959_32571053_32572880
H1_mix_00086610	chr9	-	761	3	FSM	ENSG00000165264.11	ENST00000366466.5	761	3	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_2	1129.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACAGCAATTCCATGCA	-3	True	NA	-19	True	AATAAA	-8	NA	32573184	32553532	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32553945_32558909_32558955_32572880
H1_mix_00086611	chr9	-	809	3	FSM	ENSG00000165264.11	ENST00000350021.2	666	3	-25	-118	0	0	multi-exon	FALSE	canonical	3	124	junction_1	1313.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACAGCAATTCCATGCA	-3	True	NA	-19	True	AATAAA	-8	NA	32573184	32553532	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32553945_32570959_32571053_32572880
H1_mix_00086613	chr9	-	3202	9	FSM	ENSG00000137074.20	ENST00000673416.1	3202	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	166.930187503639	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGTGACAGAGTGAGACC	20	True	NA	NA	False	NA	NA	NA	33001587	32971450	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082_32988125_32989758_32989896_32997242_32997349_33001566
H1_mix_00086614	chr9	-	2023	8	FSM	ENSG00000137074.20	ENST00000379825.7	2023	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	156.710574249578	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTTTTTGGGATAATAT	-21	True	NA	1	True	AATAAA	-24	NA	33001628	32972605	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32973689_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082_32988130_32989758_32989896_33001566
H1_mix_00086615	chr9	-	1955	8	NIC	ENSG00000137074.20	novel	3202	9	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	141.532285204126	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTCAGTTGTTTTTTGGG	-1	True	NA	-6	True	AATAAA	-17	NA	33001608	32972612	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082_32988125_32989758_32989896_33001566
H1_mix_00086616	chr9	-	1740	8	FSM	ENSG00000137074.20	ENST00000397172.8	1740	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	153.934786086014	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTCAGTTGTTTTTT	0	True	NA	-9	True	AATAAA	-14	NA	33001607	32972615	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987759_32987847_32988082_32988130_32989758_32989896_33001566
H1_mix_00086617	chr9	-	3121	8	FSM	ENSG00000137074.20	ENST00000379817.7	1977	8	26	-1170	0	4	multi-exon	FALSE	canonical	0	0	junction_5	139.687844415865	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAGAGTGAGACCCCATC	5	True	NA	NA	False	NA	NA	NA	33001602	32971445	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082_32988130_32989758_32989896_33001566
H1_mix_00086618	chr9	-	1883	7	FSM	ENSG00000137074.20	ENST00000673211.1	1991	7	108	0	108	0	multi-exon	FALSE	canonical	3	103	junction_5	116.722486646271	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGTATTCAGTTGTTTT	NA	False	NA	-11	True	AATAAA	-12	NA	32989980	32972617	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988082_32988130_32989758
H1_mix_00086619	chr9	-	1976	7	FSM	ENSG00000137074.20	ENST00000472896.6	1962	7	0	-14	0	0	multi-exon	FALSE	canonical	3	29	junction_5	160.71550087724	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTTTTTGGGATAATAT	-6	True	NA	1	True	AATAAA	-24	NA	33001613	32972605	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32989758_32989896_33001515
H1_mix_00086620	chr9	-	1957	8	FSM	ENSG00000137074.20	ENST00000467331.6	1938	8	0	-19	0	0	multi-exon	FALSE	canonical	0	0	junction_5	163.479138031214	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGTATTCAGTTGTTTT	3215	False	NA	-11	True	AATAAA	-12	NA	33024852	32972617	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082_32988125_32989758_32989896_33024803
H1_mix_00086621	chr9	-	2120	8	FSM	ENSG00000137074.20	ENST00000673487.1	2101	8	0	-19	0	0	multi-exon	FALSE	canonical	2	15	junction_7	145.693135719973	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGTATTCAGTTGTTTT	-13	True	NA	-11	True	AATAAA	-12	NA	33025130	32972617	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988082_32988125_32989758_32989896_33024803
H1_mix_00086622	chr9	-	2034	8	FSM	ENSG00000137074.20	ENST00000483148.6	2022	8	0	-12	0	0	multi-exon	FALSE	canonical	3	42	junction_7	137.977667521573	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAATAAATTTGGATAAAAC	20	True	NA	-30	True	AAAAAG	-32	NA	33001587	32972636	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988082_32988130_32989758_32989896_33001332
H1_mix_00086623	chr9	-	1819	8	FSM	ENSG00000137074.20	ENST00000485479.6	1814	8	0	-5	0	0	multi-exon	FALSE	canonical	0	0	junction_7	164.429502293505	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTTTCCCTGAGAATAAA	3	True	NA	-42	True	AAAAAG	-20	NA	33025065	32972648	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988091_32988125_32989758_32989896_33024999
H1_mix_00086624	chr9	-	2035	7	FSM	ENSG00000137074.20	ENST00000672286.1	2032	7	0	-3	0	0	multi-exon	FALSE	canonical	3	163	junction_5	100.037354134454	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTAGGTGGAAACTATT	20	True	NA	-4	True	AATAAA	-25	NA	33001587	32972752	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32988130_32989758_32989896_33001566
H1_mix_00086625	chr9	-	3229	9	FSM	ENSG00000137074.20	ENST00000379819.6	1938	9	12	-1303	0	0	multi-exon	FALSE	canonical	0	0	junction_5	166.21597396159	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTGACAGAGTGAGACCC	-1	True	NA	NA	False	NA	NA	NA	33001608	32971449	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082_32988130_32989758_32989896_32997242_32997349_33001566
H1_mix_00086627	chr9	-	1781	8	NIC	ENSG00000137074.20	novel	2022	8	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	147.565412683353	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAAGTAGGTGGAAACTAT	-1	True	NA	-5	True	AATAAA	-24	NA	33025118	32972753	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988082_32988130_32989758_32989896_33024999
H1_mix_00086628	chr9	-	2031	8	NIC	ENSG00000137074.20	novel	1977	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	165.188080807352	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTGTATTCAGTTGTTT	-1	True	NA	-12	True	AATAAA	-11	NA	33025118	32972618	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082_32988130_32989758_32989896_33024999
H1_mix_00086629	chr9	-	2016	8	NIC	ENSG00000137074.20	novel	1938	8	NA	NA	3	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	166.369149416444	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTTGTTTTTTGGGATA	18	True	NA	-3	True	AATAAA	-20	NA	33025099	32972609	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082_32988125_32989758_32989896_33024999
H1_mix_00086634	chr9	-	1420	8	FSM	ENSG00000107262.26	ENST00000379707.7	1396	8	0	-24	0	0	multi-exon	TRUE	canonical	3	29	junction_6	259.341709813481	255	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTCTCTGTGGTTGTA	-10	True	NA	-8	True	AGTAAA	-19	NA	33264720	33255024	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_33255309_33255864_33255928_33256800_33256909_33258919_33259034_33261086_33261170_33262104_33262247_33262701_33262831_33264223
H1_mix_00086635	chr9	-	4791	28	NNC	ENSG00000165271.17	novel	4834	26	NA	NA	0	102705	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	42.7360867868666	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGCCATTCACAGAATTT	-18	True	NA	NA	False	NA	NA	NA	33473924	33358647	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_33358681_33429639_33429664_33461452_33462814_33463032_33463135_33463246_33463442_33463830_33463921_33464036_33464162_33464878_33464977_33465206_33465360_33465733_33465898_33466070_33466226_33466307_33466426_33466568_33466710_33466911_33466988_33467113_33467263_33467393_33467517_33467690_33467869_33468029_33468146_33468320_33468423_33468507_33468567_33468751_33468873_33468957_33469122_33469206_33469342_33469498_33469668_33470011_33470192_33472003_33472121_33472205_33472413_33473788
H1_mix_00086636	chr9	-	1832	6	FSM	ENSG00000165272.16	ENST00000297991.6	1825	6	0	-7	0	3	multi-exon	FALSE	canonical	3	13	junction_5	3.13687742827162	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGCAAATATCTTTCTGC	1	True	NA	-6	True	AATAAA	-26	NA	33447593	33441152	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_33442212_33442300_33442519_33442851_33442971_33443320_33443459_33443765_33443893_33447422
H1_mix_00086639	chr9	-	4834	26	FSM	ENSG00000165271.17	ENST00000297990.9	4834	26	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_21	16.8380521438793	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTCGTGTCCTTCCTAG	-18	True	NA	-1	True	NA	NA	NA	33473924	33461352	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_33462814_33463032_33463135_33463246_33463442_33463830_33463921_33464036_33464162_33464878_33464977_33465206_33465360_33465733_33465898_33466070_33466226_33466307_33466426_33466568_33466710_33466911_33466988_33467113_33467263_33467393_33467517_33467690_33467869_33468029_33468146_33468320_33468423_33468507_33468567_33468751_33468873_33468957_33469122_33469206_33469342_33469498_33469668_33470011_33470192_33472003_33472121_33472205_33472413_33473788
H1_mix_00086640	chr9	-	3967	1	FSM	ENSG00000237984.3	ENST00000532280.1	3996	1	-10	39	-10	-39	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACCTACCAAATAAAATTAAA	NA	False	NA	NA	False	NA	NA	NA	33677509	33673542	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_33673500_33677500
H1_mix_00086641	chr9	-	4283	30	NNC	ENSG00000137073.24	novel	4362	30	NA	NA	0	24668	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	67.8245270421394	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGGCCACAGAAGTATGCT	329	False	NA	NA	False	NA	NA	NA	34048868	33897024	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_33897055_33921695_33922600_33922686_33922879_33922965_33923034_33923185_33923294_33923378_33923479_33923794_33924001_33924205_33924285_33926616_33926665_33926988_33927081_33927796_33927993_33932561_33932629_33933489_33933629_33935838_33935879_33941648_33941863_33943419_33943590_33944364_33944640_33948373_33948588_33953284_33953475_33956078_33956147_33960825_33960879_33963725_33963792_33971650_33971755_33973182_33973238_33986759_33986838_33988972_33989127_33996222_33996334_33998786_33998865_34017049_34017190_34048824
H1_mix_00086642	chr9	-	4282	29	FSM	ENSG00000137073.24	ENST00000379238.7	4275	29	0	-7	0	7	multi-exon	FALSE	canonical	3	240	junction_17	41.3471490515837	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTGGTGTGACTGAAG	-2	True	NA	0	True	AATAAA	-22	NA	34048887	33921685	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_33922600_33922686_33922879_33922965_33923034_33923185_33923294_33923378_33923479_33923794_33924001_33924205_33924285_33926616_33926665_33926988_33927081_33927796_33927993_33932561_33932629_33933489_33933629_33935838_33935879_33941648_33941863_33943419_33943590_33944364_33944640_33948373_33948588_33953284_33953475_33956078_33956147_33960825_33960879_33963725_33963792_33971650_33971755_33973182_33973238_33986759_33986838_33988972_33989127_33996222_33996334_33998786_33998865_34017049_34017190_34048824
H1_mix_00086643	chr9	-	4100	27	FSM	ENSG00000137073.24	ENST00000379239.9	4079	27	0	-21	0	0	multi-exon	FALSE	canonical	3	22	junction_12	82.0304911559716	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCTGAGAGCATGCATGG	329	False	NA	-22	True	NA	NA	NA	34048868	33921707	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_33922600_33922686_33922879_33922965_33923034_33923185_33923294_33923378_33923479_33923794_33924001_33924205_33924285_33926616_33926665_33926988_33927081_33927796_33927993_33932561_33932629_33933489_33933647_33935838_33935879_33941648_33941863_33943419_33943590_33944364_33944640_33948373_33948588_33953284_33953475_33956078_33956147_33960825_33960879_33963725_33963792_33986759_33986838_33988972_33989127_33996222_33996334_33998786_33998865_34017049_34017190_34048824
H1_mix_00086645	chr9	-	4110	27	FSM	ENSG00000137073.24	ENST00000360802.6	4110	27	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_26	83.1788192770934	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCTGAGAGCATGCATGG	248	False	NA	-22	True	NA	NA	NA	34048949	33921707	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_33922600_33922686_33922879_33922965_33923034_33923185_33923294_33923378_33923479_33923794_33924001_33924205_33924285_33926616_33926665_33926988_33927081_33927796_33927993_33932561_33932629_33933489_33933629_33935838_33935879_33941648_33941863_33943419_33943590_33944364_33944640_33948373_33948588_33953284_33953475_33956078_33956147_33960825_33960879_33963725_33963792_33986759_33986838_33988972_33989127_33996222_33996334_33998786_33998865_34017049_34017190_34048877
H1_mix_00086646	chr9	-	4437	29	FSM	ENSG00000137073.24	ENST00000682239.1	4437	29	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_28	65.9962410030345	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCTGAGAGCATGCATGG	NA	False	NA	-22	True	NA	NA	NA	34049388	33921707	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_33922600_33922686_33922879_33922965_33923034_33923185_33923294_33923378_33923479_33923794_33924001_33924205_33924285_33926616_33926665_33926988_33927081_33927796_33927993_33932561_33932629_33933489_33933629_33935838_33935879_33941648_33941863_33943419_33943590_33944364_33944640_33948373_33948588_33953284_33953475_33956078_33956147_33960825_33960879_33963725_33963792_33971650_33971755_33973182_33973238_33986759_33986838_33988972_33989127_33996222_33996334_33998786_33998865_34017049_34017190_34049148
H1_mix_00086649	chr9	-	3596	9	FSM	ENSG00000198876.13	ENST00000361264.9	3592	9	0	-4	0	4	multi-exon	FALSE	canonical	3	200	junction_1	17.832554500127	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGAGTGAGTATTGTGT	-9	True	NA	-2	True	AATAAA	-20	NA	34126698	34086382	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34088509_34089411_34089591_34093285_34093449_34096715_34096782_34098323_34098518_34106433_34106495_34107358_34107566_34125022_34125278_34126353
H1_mix_00086650	chr9	-	5730	9	FSM	ENSG00000186638.17	ENST00000379174.7	5729	9	0	-1	0	0	multi-exon	FALSE	canonical	1	1	junction_7	10.172727018848	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTATGACTAGGTGTTAT	552	False	NA	NA	False	AATACA	-21	NA	34311371	34252379	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34254521_34255071_34255166_34255734_34257982_34259595_34259706_34263100_34263173_34269256_34269363_34271808_34271931_34306251_34306442_34310723
H1_mix_00086651	chr9	-	6295	13	FSM	ENSG00000186638.17	ENST00000402558.7	6295	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_10	5.58954877924467	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTATGACTAGGTGTTAT	-25	True	NA	NA	False	AATACA	-21	NA	34329268	34252379	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34254521_34255071_34255166_34255734_34257982_34259595_34259706_34263100_34263173_34269256_34269363_34271808_34271931_34286616_34286705_34290173_34290390_34297016_34297115_34306251_34306442_34310723_34311372_34329105
H1_mix_00086652	chr9	-	6447	2	FSM	ENSG00000164976.9	ENST00000297625.8	6447	2	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTGTTTTATTGATTAA	-2	True	NA	NA	False	AATAAA	-21	NA	34376898	34366665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34373007_34376792
H1_mix_00086653	chr9	-	641	4	FSM	ENSG00000164972.14	ENST00000379133.7	712	4	67	4	-2	-4	multi-exon	FALSE	canonical	2	6	junction_2	6.94422221866655	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGCCTCCTGTGTC	1	True	NA	-2	True	AATAAA	-16	NA	34381533	34379022	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34379182_34379645_34379733_34380901_34381132_34381368
H1_mix_00086654	chr9	-	3575	6	FSM	ENSG00000164970.15	ENST00000379087.5	3573	6	0	-2	0	2	multi-exon	FALSE	canonical	3	26	junction_1	30.9993548319961	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGCTCCCTCCCTGGGGT	6	True	NA	87	True	ATTAAA	-19	NA	34458552	34398181	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34401120_34401665_34401721_34402386_34402468_34402704_34402808_34405915_34405965_34458203
H1_mix_00086655	chr9	-	3635	6	FSM	ENSG00000164970.15	ENST00000297620.8	3588	6	18	-65	0	59	multi-exon	FALSE	canonical	3	52	junction_4	22.2207110597298	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTCCTCTGGGCACACAT	6	True	NA	NA	False	NA	NA	NA	34458552	34398124	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34401123_34401665_34401721_34402386_34402468_34402704_34402808_34405915_34405965_34458203
H1_mix_00086656	chr9	-	3602	6	FSM	ENSG00000164970.15	ENST00000379081.5	3543	6	0	-59	0	59	multi-exon	FALSE	canonical	2	13	junction_5	34.9879979421515	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTCCTCTGGGCACACAT	6	True	NA	NA	False	NA	NA	NA	34458552	34398124	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34401123_34401665_34401721_34402386_34402468_34402704_34402808_34405915_34405965_34458236
H1_mix_00086657	chr9	-	3626	6	FSM	ENSG00000164970.15	ENST00000379089.5	3624	6	0	-2	0	2	multi-exon	FALSE	canonical	3	23	junction_4	36.3075749672159	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGCTCCCTCCCTGGGGT	6	True	NA	87	True	ATTAAA	-19	NA	34458552	34398181	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34401120_34401665_34401721_34402386_34402468_34402704_34402808_34405864_34405965_34458203
H1_mix_00086658	chr9	-	3647	6	FSM	ENSG00000164970.15	ENST00000651358.1	3645	6	0	-2	0	2	multi-exon	FALSE	canonical	3	23	junction_4	30.7219791029159	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGCTCCCTCCCTGGGGT	-12	True	NA	87	True	ATTAAA	-19	NA	34458570	34398181	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34401123_34401665_34401721_34402386_34402468_34402704_34402808_34405864_34405965_34458203
H1_mix_00086659	chr9	-	1035	2	FSM	ENSG00000168913.7	ENST00000399775.3	1028	2	0	-7	0	7	multi-exon	FALSE	canonical	3	186	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTTCTCTTCCTGAGG	-2	True	NA	2	True	AATAAA	-24	NA	34522990	34521035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34521857_34522776
H1_mix_00086660	chr9	-	1910	9	FSM	ENSG00000122756.15	ENST00000351266.8	1910	9	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_8	4.59449398737228	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTGGAACAGACCCACTT	0	True	NA	NA	False	ATTAAA	-18	NA	34589706	34551431	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34552072_34552160_34552330_34552673_34552855_34556254_34556419_34557525_34557693_34557866_34557985_34564598_34564833_34568896_34568982_34589554
H1_mix_00086662	chr9	-	1094	2	FSM	ENSG00000164967.10	ENST00000297613.4	1092	2	0	-2	0	2	multi-exon	FALSE	canonical	3	38	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCTGCTATGTGGAGTG	0	True	NA	1	True	AATAAA	-28	NA	34612104	34610483	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34611333_34611859
H1_mix_00086663	chr9	-	883	2	FSM	ENSG00000164967.10	ENST00000378959.9	872	2	0	-11	0	2	multi-exon	FALSE	canonical	3	144	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCTGCTATGTGGAGTG	7	True	NA	1	True	AATAAA	-28	NA	34612097	34610483	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34611333_34612063
H1_mix_00086665	chr9	-	1322	3	FSM	ENSG00000137100.16	ENST00000472418.5	688	3	-641	7	-641	-2	multi-exon	FALSE	canonical	3	378	junction_2	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGAGGAGTGTGCTGGC	4838	False	NA	-8	True	AATAAA	-11	NA	34615652	34613552	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34613872_34614041_34614102_34614709
H1_mix_00086666	chr9	-	939	7	FSM	ENSG00000137100.16	ENST00000259632.12	828	7	-16	-95	12	94	multi-exon	TRUE	canonical	3	309	junction_5	26.8788433944287	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTTTCTGGCAGGTGTA	-21	True	NA	94	True	ACTAAA	-12	NA	34620511	34613450	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34613872_34614041_34614102_34614709_34614769_34616029_34616114_34617884_34617972_34618675_34618761_34620368
H1_mix_00086668	chr9	-	764	6	FSM	ENSG00000137100.16	ENST00000378916.8	773	6	1	8	1	-2	multi-exon	FALSE	canonical	2	6	junction_3	140.175033440338	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGAGGAGTGTGCTGGC	9960	False	NA	-8	True	AATAAA	-11	NA	34620522	34613552	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34613872_34614041_34614102_34614709_34614769_34617884_34617972_34618675_34618761_34620368
H1_mix_00086670	chr9	-	1672	4	FSM	ENSG00000147955.18	ENST00000277010.9	1672	4	0	0	0	0	multi-exon	TRUE	canonical	3	867	junction_2	162.243301522401	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGTGTGTCTGAGCA	-30	True	NA	-24	True	AATAAA	-20	NA	34637787	34634721	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34635859_34636996_34637090_34637219_34637421_34637546
H1_mix_00086671	chr9	-	1842	3	FSM	ENSG00000147955.18	ENST00000497006.2	1842	3	0	0	0	0	multi-exon	FALSE	canonical	3	1036	junction_1	113.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGATCTGTTCCATCT	NA	False	NA	-41	True	AATAAA	-3	NA	34637844	34634738	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34635859_34636996_34637421_34637546
H1_mix_00086672	chr9	-	2878	2	FSM	ENSG00000147955.18	ENST00000681409.1	2878	2	0	0	0	0	multi-exon	FALSE	canonical	3	1263	junction_1	0	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACACACATATCACAGTTT	4	True	NA	-115	True	NA	NA	NA	34637816	34634812	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34637421_34637546
H1_mix_00086673	chr9	-	864	4	FSM	ENSG00000147955.18	ENST00000680244.1	864	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	509.964704661019	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCTTTCCATAGCTCCAC	27	False	34637820	NA	False	NA	NA	NA	34637793	34635317	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34635641_34636996_34637090_34637219_34637421_34637546
H1_mix_00086677	chr9	-	1521	3	FSM	ENSG00000187186.15	ENST00000421828.7	1521	3	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	6.5	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTCTATGACAAGCCCGAG	-19	True	NA	NA	False	NA	NA	NA	34666045	34664162	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34665191_34665313_34665374_34665612
H1_mix_00086678	chr9	-	348	4	FSM	ENSG00000187186.15	ENST00000544078.2	338	4	0	-10	0	0	multi-exon	FALSE	canonical	3	185	junction_3	21.6384431561566	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTACTGACCTCCTGACTCT	-2	True	NA	-9	True	ATTAAA	-20	NA	34666028	34665021	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34665191_34665313_34665374_34665612_34665681_34665977
H1_mix_00086679	chr9	-	471	3	FSM	ENSG00000187186.15	ENST00000416454.5	465	3	0	-6	0	0	multi-exon	FALSE	canonical	3	185	junction_2	25.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTACTGACCTCCTGACTCT	-2	True	NA	-9	True	ATTAAA	-20	NA	34666028	34665021	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34665374_34665612_34665681_34665977
H1_mix_00086680	chr9	-	270	1	FSM	ENSG00000215199.3	ENST00000399764.3	738	1	541	-73	541	73	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGTTGTTTACAATTTA	NA	False	NA	NA	False	NA	NA	NA	34922380	34922110	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34922100_34922400
H1_mix_00086681	chr9	-	3011	1	FSM	ENSG00000273597.1	ENST00000621125.1	1653	1	-890	-468	-890	468	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACCAGATTGAACTAGTC	NA	False	NA	NA	False	GATAAA	-15	NA	35003884	35000873	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35000900_35003900
H1_mix_00086683	chr9	-	4458	17	FSM	ENSG00000165280.18	ENST00000358901.11	3746	17	0	-712	0	24	multi-exon	FALSE	canonical	2	1877	junction_3	342.125251187339	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGATGTCTCTTCGTTTAT	-14	True	NA	NA	False	NA	NA	NA	35072625	35055351	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35057223_35057375_35057531_35059063_35059220_35059492_35059802_35060312_35060526_35060800_35060924_35061014_35061180_35061576_35061690_35062002_35062139_35062216_35062351_35062977_35063081_35064153_35064286_35065250_35065382_35066674_35066818_35067890_35068064_35068250_35068363_35072336
H1_mix_00086684	chr9	-	4561	17	FSM	ENSG00000165280.18	ENST00000448530.6	3849	17	0	-712	0	24	multi-exon	FALSE	canonical	2	45	junction_16	793.089991347136	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGATGTCTCTTCGTTTAT	7376	False	NA	NA	False	NA	NA	NA	35072668	35055351	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35057223_35057375_35057531_35059063_35059220_35059492_35059802_35060312_35060526_35060800_35060924_35061014_35061180_35061576_35061690_35062002_35062139_35062216_35062351_35062977_35063081_35064153_35064286_35065250_35065382_35066674_35066818_35067890_35068064_35068250_35068363_35072276
H1_mix_00086685	chr9	-	3393	17	FSM	ENSG00000165280.18	ENST00000417448.2	3382	17	0	-11	0	0	multi-exon	FALSE	canonical	2	29	junction_16	796.585829885895	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTCAAAATGGAGCCTGA	7839	False	NA	-29	True	AATAAA	-4	NA	35072205	35056576	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35057223_35057375_35057531_35059063_35059220_35059492_35059802_35060312_35060526_35060800_35060924_35061014_35061180_35061576_35061690_35062002_35062139_35062216_35062351_35062977_35063081_35064153_35064286_35065250_35065382_35066674_35066818_35067890_35068064_35068250_35068363_35071756
H1_mix_00086686	chr9	-	4691	16	FSM	ENSG00000165280.18	ENST00000681690.1	4691	16	0	0	0	0	multi-exon	FALSE	canonical	2	1877	junction_2	345.001771332007	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTTAATGTTGGAAAACTA	-14	True	NA	-104	True	NA	NA	NA	35072625	35056651	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35057223_35057375_35059220_35059492_35059802_35060312_35060526_35060800_35060924_35061014_35061180_35061576_35061690_35062002_35062139_35062216_35062351_35062977_35063081_35064153_35064286_35065250_35065382_35066674_35066818_35067890_35068064_35068250_35068363_35072336
H1_mix_00086688	chr9	-	3061	14	FSM	ENSG00000221829.10	ENST00000378643.8	2556	14	0	-505	0	501	multi-exon	FALSE	canonical	3	190	junction_5	43.7384642441624	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTCTACTGAATTGGCT	-11	True	NA	NA	False	NA	NA	NA	35079942	35073333	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35074217_35074370_35074495_35074926_35075083_35075278_35075326_35075464_35075755_35075961_35076029_35076431_35076584_35076723_35076871_35076970_35077102_35077263_35077400_35078140_35078344_35078604_35078737_35079150_35079242_35079440
H1_mix_00086691	chr9	-	2462	15	NIC	ENSG00000221829.10	novel	2556	14	NA	NA	-98	-1	combination_of_known_junctions	FALSE	canonical	3	66	junction_14	73.3618721524627	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCTGCCTACTACATATAC	4	True	NA	-18	True	AGTAAA	-16	NA	35080040	35073835	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_35074217_35074370_35074495_35074926_35075083_35075278_35075326_35075464_35075755_35075961_35076029_35076431_35076584_35076723_35076871_35076970_35077102_35077263_35077400_35078140_35078344_35078604_35078737_35079150_35079242_35079440_35079536_35079730
H1_mix_00086695	chr9	-	2588	13	FSM	ENSG00000165282.14	ENST00000298004.9	2588	13	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_12	47.2848196218053	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCTGAGATGTGGGG	6963	False	NA	-46	True	AATAAA	-16	NA	35096220	35088687	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35089222_35089379_35089451_35090065_35090281_35090465_35090673_35091239_35091292_35092542_35092768_35093029_35093210_35093420_35093581_35093900_35094025_35094215_35094360_35095054_35095567_35095878_35095977_35096154
H1_mix_00086696	chr9	-	4169	12	NIC	ENSG00000165282.14	novel	2588	13	NA	NA	0	0	intron_retention	FALSE	canonical	2	9	junction_11	44.909642985197	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCTGAGATGTGGGG	6633	False	NA	-46	True	AATAAA	-16	NA	35096550	35088687	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_35089222_35089379_35089451_35090065_35090281_35090465_35090673_35091239_35092768_35093029_35093210_35093420_35093581_35093900_35094025_35094215_35094360_35095054_35095567_35095878_35095977_35096154
H1_mix_00086697	chr9	-	3849	11	NIC	ENSG00000165282.14	novel	2464	12	NA	NA	-17	116	intron_retention	FALSE	canonical	3	62	junction_10	23.1734762174344	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAACCTTTATGAAGTGG	-20	True	NA	70	True	NA	NA	NA	35096618	35088571	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_35089222_35089379_35089451_35090065_35090281_35090465_35090673_35091239_35092768_35093029_35093210_35093420_35093581_35093900_35094025_35094215_35094360_35095054_35095567_35096560
H1_mix_00086698	chr9	-	4112	11	FSM	ENSG00000165282.14	ENST00000378617.4	4112	11	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_10	39.2923656707	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCTGAGATGTGGGG	7	True	NA	-46	True	AATAAA	-16	NA	35096591	35088687	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35089222_35089379_35089451_35090065_35090281_35090465_35090673_35091239_35092768_35093029_35093210_35093420_35093581_35093900_35094025_35094215_35094360_35095054_35095567_35096154
H1_mix_00086699	chr9	-	2465	12	FSM	ENSG00000165282.14	ENST00000361778.6	2464	12	0	-1	0	0	multi-exon	FALSE	canonical	3	42	junction_5	32.8799469143566	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCTGAGATGTGGGG	-3	True	NA	-46	True	AATAAA	-16	NA	35096601	35088687	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35089222_35089379_35089451_35090065_35090281_35090465_35090673_35091239_35091292_35092542_35092768_35093029_35093210_35093420_35093581_35093900_35094025_35094215_35094360_35095054_35095567_35096560
H1_mix_00086702	chr9	-	6657	4	FSM	ENSG00000165282.14	ENST00000474436.1	6655	4	0	-2	0	0	multi-exon	FALSE	canonical	3	130	junction_3	2.62466929133727	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCTGAGATGTGGGG	6633	False	NA	-46	True	AATAAA	-16	NA	35096550	35088687	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35093581_35093900_35094025_35094215_35094360_35095054
H1_mix_00086704	chr9	-	1342	10	FSM	ENSG00000165283.16	ENST00000356493.10	1365	10	0	23	0	-23	multi-exon	FALSE	canonical	3	1470	junction_9	189.520903436814	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAACTTCTTGTAAAGTG	1	True	NA	89	True	NA	NA	NA	35103131	35099800	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35100173_35100597_35100727_35100931_35101012_35101134_35101280_35101425_35101561_35101709_35101812_35101903_35101963_35102094_35102195_35102685_35102824_35103049
H1_mix_00086705	chr9	-	1265	9	FSM	ENSG00000165283.16	ENST00000619795.4	1293	9	3	25	3	-23	multi-exon	FALSE	canonical	3	58	junction_8	629.755098728863	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAACTTCTTGTAAAGTG	9196	False	NA	89	True	NA	NA	NA	35103192	35099800	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35100173_35100597_35100727_35100931_35101012_35101134_35101280_35101425_35101561_35101709_35101812_35101903_35101963_35102094_35102195_35103049
H1_mix_00086706	chr9	-	1255	9	FSM	ENSG00000165283.16	ENST00000452248.6	1296	9	3	38	3	-36	multi-exon	TRUE	canonical	2	84	junction_4	621.613814498198	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCCATGAATAAGAGTGAAC	9196	False	NA	76	True	NA	NA	NA	35103192	35099813	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35100173_35100597_35100727_35100931_35101012_35101134_35101280_35101709_35101812_35101903_35101963_35102094_35102195_35102685_35102824_35103049
H1_mix_00086708	chr9	-	3265	9	FSM	ENSG00000005238.20	ENST00000603301.5	3256	9	0	-9	0	0	multi-exon	TRUE	canonical	3	10	junction_8	18.8774832803528	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTGTTGTTGTTGTTGT	0	True	NA	0	True	AATAAA	-30	NA	35111588	35104111	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35105375_35105681_35105858_35105940_35106010_35106251_35106411_35106537_35106644_35106832_35106892_35107380_35108350_35108593_35108738_35111268
H1_mix_00086709	chr9	-	2566	10	FSM	ENSG00000005238.20	ENST00000378566.5	2566	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	20.2965666378319	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTGTTGTTGTTGTTGT	16	True	NA	0	True	AATAAA	-30	NA	35115850	35104111	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35105375_35105681_35105858_35105940_35106010_35106251_35106411_35106537_35106644_35106832_35106892_35107380_35107569_35108127_35108350_35108593_35108738_35115670
H1_mix_00086710	chr9	-	3003	9	FSM	ENSG00000005238.20	ENST00000322813.10	2998	9	0	-5	0	0	multi-exon	FALSE	canonical	3	19	junction_8	16.1690290370201	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTGTTGTTGTTGTTGT	4	True	NA	0	True	AATAAA	-30	NA	35115862	35104111	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35105375_35105681_35105858_35105940_35106010_35106251_35106411_35106537_35106644_35106832_35106892_35107380_35108350_35108593_35108738_35115804
H1_mix_00086711	chr9	-	336	2	FSM	ENSG00000005238.20	ENST00000605392.1	585	2	0	249	0	-249	multi-exon	FALSE	canonical	3	35	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTACCAGGGAGAAGAG	4	True	NA	NA	False	NA	NA	NA	35115862	35108593	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35108738_35115670
H1_mix_00086713	chr9	-	1302	1	FSM	ENSG00000288586.1	ENST00000673624.1	1703	1	242	159	242	-159	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTCTGGAGGCGTTTGG	NA	False	NA	NA	False	NA	NA	NA	35604897	35603595	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35603600_35604900
H1_mix_00086714	chr9	-	1348	8	NNC	ENSG00000137101.14	novel	1531	9	NA	NA	288	-194	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	9.91391518451284	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTCTGCTGCCTGCTCCC	1479	False	NA	NA	False	NA	NA	NA	35618065	35610178	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_35610301_35610601_35610754_35611803_35611920_35612847_35612994_35615942_35616279_35616599_35616690_35616913_35617248_35618013
H1_mix_00086715	chr9	-	1234	5	FSM	ENSG00000137078.10	ENST00000259608.8	1222	5	0	-12	0	12	multi-exon	FALSE	canonical	3	38	junction_1	2.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGAAGGCTGAAGACTTG	5	True	NA	-5	True	AATAAA	-28	NA	35650931	35649282	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35650082_35650183_35650246_35650356_35650416_35650501_35650638_35650753
H1_mix_00086716	chr9	-	1339	4	NIC	ENSG00000137078.10	novel	1222	5	NA	NA	-19	12	intron_retention	FALSE	canonical	3	38	junction_1	2.35702260395516	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGAAGGCTGAAGACTTG	-14	True	NA	-5	True	AATAAA	-28	NA	35650950	35649282	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_35650082_35650183_35650246_35650356_35650638_35650753
H1_mix_00086717	chr9	-	3212	10	NIC	ENSG00000137135.18	novel	4498	12	NA	NA	6	0	intron_retention	FALSE	canonical	3	56	junction_1	58.6287756424551	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGACTACTGTCTTTATTTT	17	True	NA	0	True	NA	NA	NA	35665181	35658874	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_35659174_35660093_35662003_35662178_35662268_35662511_35662742_35662945_35663075_35663321_35663393_35664007_35664127_35664371_35664493_35664755_35664851_35665031
H1_mix_00086718	chr9	-	3847	9	FSM	ENSG00000137135.18	ENST00000378387.4	3678	9	0	-169	0	169	multi-exon	FALSE	canonical	3	191	junction_4	25.7023223658875	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCTCCTCCCAAGGAGAAC	3	True	NA	NA	False	NA	NA	NA	35665195	35659173	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35662003_35662178_35662268_35662511_35662742_35662945_35663075_35663321_35663393_35664007_35664127_35664371_35664493_35664755_35664851_35665031
H1_mix_00086720	chr9	-	739	4	FSM	ENSG00000137135.18	ENST00000468876.1	739	4	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_1	15.9652400197707	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCAAAGGGGCTGACCTCA	370	False	NA	NA	False	NA	NA	NA	35664828	35662966	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35663393_35664007_35664127_35664371_35664493_35664755
H1_mix_00086721	chr9	-	1034	9	FSM	ENSG00000198467.16	ENST00000329305.6	1018	9	0	-16	0	-5	multi-exon	FALSE	canonical	3	606	junction_4	88.2662874488329	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTCTTTGGTGTTGGCA	7469	False	NA	-6	True	AATAAA	-33	NA	35689913	35681997	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35682164_35684245_35684316_35684487_35684551_35684731_35684808_35685268_35685340_35685433_35685552_35685646_35685781_35689145_35689272_35689703
H1_mix_00086722	chr9	-	1182	9	FSM	ENSG00000198467.16	ENST00000378292.9	1182	9	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_3	284.793099240484	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGGTGTTGGCAATGGA	9911	False	NA	-1	True	AATAAA	-38	NA	35690056	35681992	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35682164_35684245_35684316_35684487_35684551_35685063_35685140_35685268_35685340_35685433_35685552_35685646_35685781_35689145_35689272_35689703
H1_mix_00086723	chr9	-	1190	9	FSM	ENSG00000198467.16	ENST00000645482.3	1190	9	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	257.060304208954	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCATGCTGTTTTCCTGC	0	True	NA	-13	True	AATAAA	-13	NA	35689925	35682931	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35683242_35684245_35684316_35684487_35684551_35684731_35684808_35685268_35685340_35685433_35685552_35685646_35685781_35689145_35689272_35689703
H1_mix_00086724	chr9	-	1190	9	FSM	ENSG00000198467.16	ENST00000647435.1	1185	9	0	-5	0	0	multi-exon	FALSE	canonical	3	81	junction_1	341.45495218989	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCATGCTGTTTTCCTGC	0	True	NA	-13	True	AATAAA	-13	NA	35689925	35682931	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35683242_35684245_35684316_35684487_35684551_35685063_35685140_35685268_35685340_35685433_35685552_35685646_35685781_35689145_35689272_35689703
H1_mix_00086725	chr9	-	518	5	FSM	ENSG00000198467.16	ENST00000607559.1	518	5	0	0	0	0	multi-exon	FALSE	canonical	3	606	junction_3	111.907048482211	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGCATGAGAATCACTGG	21	True	NA	NA	False	NA	NA	NA	35685466	35684040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35684316_35684487_35684551_35684731_35684808_35685268_35685340_35685433
H1_mix_00086726	chr9	-	8621	57	FSM	ENSG00000137076.21	ENST00000314888.10	8623	57	0	2	0	-2	multi-exon	TRUE	canonical	3	259	junction_20	47.8185211961616	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGCCTGTAAGTGTCTG	179	False	35732211	NA	False	NA	NA	NA	35732195	35696949	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35697917_35698043_35698173_35698322_35698506_35698616_35698680_35698807_35698934_35699031_35699157_35699355_35699462_35699973_35700082_35700190_35700377_35703559_35703677_35703774_35703901_35703990_35704175_35704331_35704499_35704668_35704816_35705550_35705671_35705749_35705852_35705961_35706112_35706195_35706367_35706449_35706552_35706767_35706901_35707071_35707254_35707347_35707489_35707730_35707893_35708340_35708485_35710560_35710684_35710796_35710887_35710988_35711083_35711254_35711395_35711594_35711793_35712004_35712125_35712834_35713044_35713195_35713299_35713952_35714082_35714238_35714374_35714573_35714688_35714759_35714877_35715058_35715188_35716389_35716557_35717145_35717441_35717618_35717787_35718811_35718911_35719073_35719283_35719518_35719628_35719739_35719854_35720038_35720220_35720432_35720510_35720811_35720914_35721647_35721804_35722118_35722224_35722860_35722922_35723951_35724080_35724191_35724335_35724571_35724725_35724829_35724960_35725223_35725322_35725564_35725728_35732074
H1_mix_00086727	chr9	-	446	3	FSM	ENSG00000137076.21	ENST00000466916.1	446	3	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_2	17.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGAGAGTCTGGGGCA	7473	False	NA	NA	False	NA	NA	NA	35704193	35703559	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35703677_35703774_35703901_35703990
H1_mix_00086728	chr9	-	636	2	NNC	ENSG00000137076.21	novel	8623	57	NA	NA	-167	-5948	at_least_one_novel_splicesite	FALSE	canonical	3	104	junction_1	0	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTTTATTATCTCTAT	12	False	NA	-12	True	AATAAA	-14	NA	35732362	35729051	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_35729400_35732074
H1_mix_00086729	chr9	-	1673	2	FSM	ENSG00000070610.14	ENST00000378088.1	1672	2	0	-1	0	0	multi-exon	FALSE	canonical	3	485	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTGTGGTGTGTTTGAG	NA	False	NA	-4	True	AATAAA	-16	NA	35738635	35736865	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35737940_35738036
H1_mix_00086730	chr9	-	3392	16	NIC	ENSG00000070610.14	novel	3611	17	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	3	76	junction_13	92.5517272784372	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTGTGGTGTGTTTGAG	-23	True	NA	-4	True	AATAAA	-16	NA	35749228	35736865	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_35737448_35737747_35737940_35738036_35738153_35738231_35738375_35738525_35738633_35738751_35738904_35739001_35739110_35739314_35739420_35739627_35739801_35739997_35740124_35740208_35740363_35740525_35740629_35740824_35741065_35744296_35744413_35744614_35744707_35748345
H1_mix_00086731	chr9	-	3611	17	FSM	ENSG00000070610.14	ENST00000378103.7	3611	17	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_14	60.6096307838119	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTGTGGTGTGTTTGAG	-23	True	NA	-4	True	AATAAA	-16	NA	35749228	35736865	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35737448_35737747_35737940_35738036_35738153_35738231_35738375_35738525_35738633_35738751_35738904_35739001_35739110_35739314_35739420_35739627_35739801_35739997_35740124_35740208_35740363_35740525_35740629_35740824_35741065_35741671_35741891_35744296_35744413_35744614_35744707_35748345
H1_mix_00086732	chr9	-	772	3	FSM	ENSG00000070610.14	ENST00000486797.1	772	3	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_1	24	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGGAGACACTGAGGTGA	9950	False	NA	NA	False	NA	NA	NA	35739041	35738052	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35738633_35738751_35738904_35739001
H1_mix_00086733	chr9	-	697	2	FSM	ENSG00000070610.14	ENST00000488292.1	646	2	-51	0	-51	0	multi-exon	FALSE	canonical	3	417	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGAGGGCTGTGGCTGGCA	9830	False	NA	NA	False	NA	NA	NA	35739161	35738366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35738904_35739001
H1_mix_00086735	chr9	-	570	5	FSM	ENSG00000137133.11	ENST00000472085.5	569	5	0	-1	0	1	multi-exon	FALSE	canonical	0	0	junction_3	213.935738014947	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCTCCTGTCTTTAAT	6	True	NA	-1	True	AATAAA	-17	NA	35814992	35812958	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35813146_35813265_35813339_35813444_35813520_35813643_35813785_35814898
H1_mix_00086736	chr9	-	749	4	FSM	ENSG00000137133.11	ENST00000461169.1	734	4	0	-15	0	1	multi-exon	FALSE	canonical	3	489	junction_1	13.0724477007517	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCTCCTGTCTTTAAT	3	True	NA	-1	True	AATAAA	-17	NA	35815021	35812958	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35813339_35813444_35813550_35813643_35813785_35814898
H1_mix_00086737	chr9	-	650	5	FSM	ENSG00000137133.11	ENST00000259667.6	649	5	0	-1	0	1	multi-exon	FALSE	canonical	3	466	junction_1	20.2113829314077	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCTCCTGTCTTTAAT	2	True	NA	-1	True	AATAAA	-17	NA	35815042	35812958	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35813146_35813265_35813339_35813444_35813550_35813643_35813785_35814898
H1_mix_00086738	chr9	-	2168	3	FSM	ENSG00000137133.11	ENST00000474908.5	2167	3	0	-1	0	1	multi-exon	FALSE	canonical	3	466	junction_1	11.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCTCCTGTCTTTAAT	NA	False	NA	-1	True	AATAAA	-17	NA	35815352	35812958	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35813146_35813265_35813339_35813444
H1_mix_00086739	chr9	-	997	5	FSM	ENSG00000137133.11	ENST00000474848.6	853	5	-143	-1	-143	1	multi-exon	FALSE	canonical	3	43	junction_4	192.445446815455	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCTCCTGTCTTTAAT	NA	False	NA	-1	True	AATAAA	-17	NA	35815497	35812958	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35813146_35813265_35813339_35813444_35813550_35813643_35813785_35815006
H1_mix_00086740	chr9	-	675	1	FSM	ENSG00000213866.3	ENST00000444752.1	975	1	107	193	107	-193	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAGATAAAGAAAATCAAG	244	False	NA	NA	False	NA	NA	NA	35972211	35971536	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35971500_35972200
H1_mix_00086743	chr9	-	5111	11	FSM	ENSG00000137075.18	ENST00000350199.8	5104	11	2	-9	2	1	multi-exon	FALSE	canonical	3	57	junction_10	43.7704238042082	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTTTCATGTCACTGT	336	False	NA	0	True	AATAAA	-26	NA	36400921	36336394	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_36339815_36342324_36342425_36344831_36344954_36351114_36351200_36352741_36352849_36353169_36353332_36356302_36356474_36357774_36357943_36369718_36369933_36375933_36376128_36400553
H1_mix_00086744	chr9	-	5261	12	FSM	ENSG00000137075.18	ENST00000357058.7	5254	12	2	-9	2	1	multi-exon	FALSE	canonical	3	15	junction_11	63.3783079401412	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTTTCATGTCACTGT	336	False	NA	0	True	AATAAA	-26	NA	36400921	36336394	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_36339815_36342324_36342425_36344831_36344954_36351114_36351200_36352741_36352849_36353169_36353332_36356302_36356474_36357774_36357943_36369718_36369933_36375933_36376128_36390466_36390617_36400553
H1_mix_00086745	chr9	-	4840	11	NIC	ENSG00000137075.18	novel	4985	12	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_10	53.7248545833304	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGTTTCATGTCACTG	-5	True	NA	-1	True	AATAAA	-25	NA	36401195	36336395	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_36339815_36342324_36342425_36344831_36344954_36351114_36351200_36352741_36352849_36353169_36353332_36356302_36356474_36357774_36357943_36369718_36369933_36375933_36376128_36401097
H1_mix_00086746	chr9	-	5084	12	NNC	ENSG00000137075.18	novel	5254	12	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_11	68.024424393372	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTTGTGTTTCATGTC	-7	True	NA	-5	True	AATAAA	-21	NA	36400851	36336399	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_36339815_36342324_36342425_36344831_36344954_36351114_36351200_36352741_36352849_36353169_36353332_36356302_36356474_36357774_36357943_36369718_36369933_36375933_36376128_36390568_36390617_36400553
H1_mix_00086747	chr9	-	5069	11	NIC	ENSG00000137075.18	novel	5061	12	NA	NA	-90	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	59.2752899613321	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTTGTGTTTCATGTC	-7	True	NA	-5	True	AATAAA	-21	NA	36487638	36336399	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_36339815_36342324_36342425_36344831_36344954_36351114_36351200_36352741_36352849_36353169_36353332_36356302_36356474_36357774_36357943_36369718_36369933_36375933_36376128_36487307
H1_mix_00086748	chr9	-	5162	12	NIC	ENSG00000137075.18	novel	4945	11	NA	NA	-108	0	combination_of_known_splicesites	FALSE	canonical	3	64	junction_10	45.8841516419431	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGTTTCATGTCACTG	-25	True	NA	-1	True	AATAAA	-25	NA	36487656	36336395	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_36339815_36342324_36342425_36344831_36344954_36351114_36351200_36352741_36352849_36353169_36353332_36356302_36356474_36357774_36357943_36369718_36369933_36375933_36376128_36424612_36424684_36487307
H1_mix_00086749	chr9	-	5318	13	NIC	ENSG00000137075.18	novel	5061	12	NA	NA	-118	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_11	61.6461114390483	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTTGTGTTTCATGTC	26	False	36487692	-5	True	AATAAA	-21	NA	36487666	36336399	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_36339815_36342324_36342425_36344831_36344954_36351114_36351200_36352741_36352849_36353169_36353332_36356302_36356474_36357774_36357943_36369718_36369933_36375933_36376128_36390466_36390617_36424612_36424684_36487307
H1_mix_00086750	chr9	-	344	1	FSM	ENSG00000228292.1	ENST00000404812.2	257	1	-18	-69	-18	69	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCAGAGCCCTCATGACC	NA	False	NA	NA	False	NA	NA	NA	37205386	37205042	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_37205000_37205400
H1_mix_00086751	chr9	-	4652	2	FSM	ENSG00000168795.5	ENST00000307750.5	4690	2	38	0	38	0	multi-exon	FALSE	canonical	3	15	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTTCTTTTTCTTTAC	17	True	NA	0	True	AATAAA	-27	NA	37465412	37438101	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_37442556_37465214
H1_mix_00086753	chr9	-	2999	11	FSM	ENSG00000256966.6	ENST00000544475.5	2999	11	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_10	18.538878067456	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACACAGACCTGCTTCAGG	3717	False	NA	NA	False	NA	NA	NA	37588874	37512546	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_37512722_37515903_37516086_37518124_37518439_37521568_37521839_37522824_37522978_37525101_37525173_37529123_37529261_37531908_37532059_37537109_37537944_37541183_37541775_37588752
H1_mix_00086755	chr9	-	3280	3	ISM	ENSG00000147912.13	ENST00000276960.7	3654	9	35	20339	35	6223	5prime_fragment	FALSE	canonical	3	60	junction_2	10	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGATTTTCTTCTTTATG	91	False	NA	-1	True	AATAAA	-20	NA	37576288	37535332	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_37537944_37541183_37541775_37576210
H1_mix_00086757	chr9	-	6024	1	Genic_Genomic	ENSG00000175768.13	novel	NA	NA	NA	NA	5014	1214	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAATGATACAAAATACATA	5136	False	NA	NA	False	AATACA	-12	NA	37587455	37581431	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_-_37581400_37587500
H1_mix_00086758	chr9	-	706	2	FSM	ENSG00000175768.13	ENST00000321301.7	706	2	0	0	0	0	multi-exon	FALSE	canonical	3	4473	junction_1	0	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGTTTCTATTTTTCTT	-6	True	NA	86	True	AATAAA	-18	NA	37592597	37588412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_37588933_37592411
H1_mix_00086759	chr9	-	808	2	FSM	ENSG00000175768.13	ENST00000377773.9	808	2	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGTTTCTATTTTTCTT	-6	True	NA	86	True	AATAAA	-18	NA	37592597	37588412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_37588933_37592309
H1_mix_00086760	chr9	-	789	2	FSM	ENSG00000175768.13	ENST00000401811.3	789	2	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTATTAGTCTATGTTT	-13	True	NA	41	True	NA	NA	NA	37592604	37588457	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_37588933_37592290
H1_mix_00086761	chr9	-	1101	5	NNC	ENSG00000107371.14	novel	1813	4	NA	NA	0	60684	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	260.162809601987	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAATGAGATGCATAATAC	-3	True	NA	NA	False	NA	NA	NA	37785064	37698549	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_37698580_37780455_37780881_37781985_37782138_37783913_37784064_37784720
H1_mix_00086762	chr9	-	2253	3	FSM	ENSG00000107371.14	ENST00000465860.6	2253	3	0	0	0	0	multi-exon	FALSE	canonical	3	504	junction_1	94.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATGATACATTTCACAAC	316	False	NA	-99	True	AATATA	-19	NA	37784745	37780059	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_37782138_37783913_37784064_37784720
H1_mix_00086765	chr9	-	3169	4	FSM	ENSG00000122696.14	ENST00000496760.5	1871	4	-1296	-2	-1296	2	multi-exon	FALSE	canonical	3	16	junction_1	4.92160768674447	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGTAGCAAACTGAGCT	6312	False	NA	1	True	AATAAA	-20	NA	37905649	37879397	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_37880749_37881517_37881632_37899828_37899951_37904067
H1_mix_00086766	chr9	-	1642	3	FSM	ENSG00000122696.14	ENST00000377716.6	1691	3	53	-4	53	4	multi-exon	FALSE	canonical	2	7	junction_2	3	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGCCTCTTTTTTTTTT	7904	False	NA	-16	True	AATAGA	-19	NA	37904057	37887599	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_37888593_37899828_37899951_37903530
H1_mix_00086767	chr9	-	6050	6	FSM	ENSG00000107338.10	ENST00000377707.4	6035	6	-34	19	-34	-19	multi-exon	FALSE	canonical	3	156	junction_4	10.2449987798926	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACAAGTGTCTTGTTTAC	-20	True	NA	-24	True	NA	NA	NA	38069261	37915916	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_37920005_37948634_37948755_37955882_37956055_37974621_37974838_38016010_38016132_38067928
H1_mix_00086768	chr9	-	3566	5	FSM	ENSG00000137142.5	ENST00000377694.2	3566	5	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_4	31.2969647090577	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTGTGGTGTCTTTGTT	-1	True	NA	-4	True	AATAAA	-15	NA	38424454	38406527	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_38409218_38411390_38411550_38413236_38413354_38414093_38414204_38423964
H1_mix_00086769	chr9	-	871	3	FSM	ENSG00000273036.3	ENST00000562942.2	871	3	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_1	2	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGCCAGTCTCTCTCTGTG	NA	False	NA	2	True	AATAAA	-18	NA	38542792	38540566	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_38540850_38541455_38541563_38542311
H1_mix_00086771	chr9	-	5064	24	FSM	ENSG00000106714.18	ENST00000297668.11	13150	24	29	8057	29	0	multi-exon	FALSE	canonical	2	11	junction_4	11.1579144476204	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCACTAATTCCTTTTCTA	24	False	NA	-1	True	ATTAAA	-18	NA	39288138	39072766	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_39074012_39078384_39078457_39078689_39078921_39085735_39085824_39086715_39086850_39088422_39088648_39099910_39100151_39102496_39102716_39103743_39103915_39109159_39109288_39118102_39118260_39132931_39133136_39140518_39140639_39144239_39144347_39149805_39149978_39165932_39166077_39171368_39171631_39175948_39176093_39177317_39177503_39178156_39178361_39193127_39193276_39238992_39239187_39266895_39267007_39287979
H1_mix_00086772	chr9	-	4892	18	FSM	ENSG00000106714.18	ENST00000358144.6	4885	18	0	-7	0	7	multi-exon	FALSE	canonical	3	12	junction_8	11.0334502410376	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAGGTGTTAATGTTTTC	NA	False	NA	NA	False	AATAAA	-13	NA	39239174	39084969	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_39086850_39088422_39088648_39099910_39100151_39102496_39102716_39103743_39103915_39109159_39109288_39118102_39118260_39132931_39133136_39140518_39140639_39144239_39144347_39149805_39149978_39165932_39166077_39171368_39171631_39175948_39176093_39177317_39177503_39178156_39178361_39193127_39193276_39238992
H1_mix_00086773	chr9	-	3375	1	FSM	ENSG00000198416.9	ENST00000615961.1	3375	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTCCTAGGTATTTTT	NA	False	NA	NA	False	AATAAA	-23	NA	39447189	39443814	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_39443800_39447200
H1_mix_00086775	chr9	-	833	3	FSM	ENSG00000278175.5	ENST00000667968.2	902	3	61	8	0	-6	multi-exon	FALSE	canonical	3	34	junction_1	4	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTATCATCTGTTCCAGTT	0	True	NA	NA	False	AATAAA	-22	NA	39810062	39803488	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_39803860_39809485_39809616_39809730
H1_mix_00086776	chr9	-	1880	3	FSM	ENSG00000278175.5	ENST00000627065.3	1884	3	34	-30	0	5	multi-exon	FALSE	canonical	3	11	junction_1	15.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	39810094	39807375	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_39808762_39809485_39809616_39809730
H1_mix_00086777	chr9	-	1888	3	FSM	ENSG00000283886.3	ENST00000622735.2	1888	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	3.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTATTGTTTTGTTATTT	NA	False	NA	NA	False	ATTAAA	-22	NA	39874562	39816598	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_39817730_39818820_39818925_39873909
H1_mix_00086778	chr9	-	3336	6	FSM	ENSG00000215126.11	ENST00000617917.4	3334	6	0	-2	0	0	multi-exon	FALSE	canonical	3	181	junction_3	154.545268449086	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGTCACCATTTTATG	NA	False	NA	NA	False	ATTAAA	-15	NA	41158916	41131355	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_41131841_41132227_41132358_41133504_41133571_41133673_41133743_41145280_41145333_41156382
H1_mix_00086780	chr9	-	1709	15	NIC	ENSG00000215126.11	novel	1554	16	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_7	363.55966862822	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAAGTGTCACCATTTTA	NA	False	NA	NA	False	ATTAAA	-13	NA	41189375	41131357	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_41131841_41132227_41132358_41133504_41133571_41133673_41133743_41145280_41145333_41156382_41156440_41162332_41162378_41165000_41165088_41166783_41166831_41171846_41171935_41172711_41172750_41182374_41182467_41183563_41183661_41185992_41186080_41189104
H1_mix_00086783	chr9	-	2996	3	FSM	ENSG00000215126.11	ENST00000611553.4	2996	3	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	82.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGTCACCATTTTATG	NA	False	NA	NA	False	ATTAAA	-15	NA	41145992	41131355	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_41133571_41133673_41133743_41145280
H1_mix_00086786	chr9	-	2541	2	FSM	ENSG00000204802.3	ENST00000377518.3	2541	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCGGGCAAGGCACGAT	NA	False	NA	NA	False	NA	NA	NA	62376783	62374127	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_62376383_62376497
H1_mix_00086787	chr9	-	405	3	ISM	ENSG00000234665.9	ENST00000445604.7	1610	5	632	2392	242	-115	5prime_fragment	FALSE	canonical	3	20	junction_2	7	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATGACAATTTCTTAAAA	NA	False	NA	NA	False	AATAAA	-19	NA	62897463	62867988	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_62868234_62869189_62869305_62897418
H1_mix_00086788	chr9	-	996	3	FSM	ENSG00000234665.9	ENST00000654882.1	1713	3	0	717	0	-46	multi-exon	FALSE	canonical	3	30	junction_2	2	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGTTTGGATTAATCCAG	NA	False	NA	NA	False	NA	NA	NA	62898095	62867919	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_62868234_62869189_62869305_62897528
H1_mix_00086789	chr9	-	719	4	NNC	ENSG00000237238.3	novel	1120	8	NA	NA	-200	-3060	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	3.55902608401044	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATTTTAGCTTTGTGCTT	NA	False	NA	NA	False	ATTAAA	-14	NA	63385317	63375862	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_63376099_63379122_63379295_63379939_63380012_63385078
H1_mix_00086790	chr9	-	241	4	NNC	ENSG00000204790.9	novel	386	7	NA	NA	-5203	-26901	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	24.0970260959038	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAAGTTCTTAGAAGTTTA	NA	False	NA	NA	False	NA	NA	NA	64009358	64001662	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_64001750_64002526_64002565_64004095_64004156_64009302
H1_mix_00086791	chr9	-	332	2	Intergenic	novelGene_1555	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAACAACAACAAAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	65287800	65225125	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_-_65225145_65287487
H1_mix_00086793	chr9	-	655	9	FSM	ENSG00000204778.4	ENST00000445695.1	655	9	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	583.459028124512	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAACACTAGTGGCATTTC	NA	False	NA	NA	False	NA	NA	NA	65323015	65287913	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_65288016_65288402_65288533_65289657_65289724_65289826_65289896_65301424_65301477_65312570_65312628_65318515_65318561_65321192_65321280_65322968
H1_mix_00086794	chr9	-	731	3	FSM	ENSG00000276203.5	ENST00000615683.1	836	3	42	63	1	-63	multi-exon	FALSE	canonical	1	1	junction_2	1.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATAGGTCAATCAACTTTC	NA	False	NA	NA	False	NA	NA	NA	66153093	66148888	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_66149063_66149224_66149340_66152651
H1_mix_00086795	chr9	-	550	1	FSM	ENSG00000278763.1	ENST00000610601.1	213	1	-58	-279	-58	279	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGCTTCCATACGTGTC	746	False	NA	NA	False	NA	NA	NA	67725960	67725410	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_67725400_67726000
H1_mix_00086797	chr9	-	367	3	FSM	ENSG00000107282.8	ENST00000470082.2	367	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGATCTGCCACGTCTTC	NA	False	NA	NA	False	NA	NA	NA	69467948	69456278	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_69456433_69457052_69457140_69467822
H1_mix_00086798	chr9	-	10102	8	FSM	ENSG00000188647.13	ENST00000340434.5	10099	8	0	-3	0	0	multi-exon	FALSE	canonical	3	15	junction_1	24.403914038698	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTAAGTGTGATTTTGTT	-3	True	NA	-1	True	AGTAAA	-21	NA	69760011	69709521	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_69718569_69718649_69718685_69723325_69723631_69732138_69732353_69734149_69734255_69741791_69741859_69750780_69750951_69759852
H1_mix_00086799	chr9	-	10211	9	NNC	ENSG00000188647.13	novel	10099	8	NA	NA	-59	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	34.0181477302924	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGTTAAGTGTGATTTT	NA	False	NA	-4	True	AGTAAA	-18	NA	69760070	69709524	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_69718566_69718649_69718685_69723325_69723631_69732138_69732353_69734149_69734255_69740720_69740777_69741791_69741859_69750780_69750951_69759852
H1_mix_00086801	chr9	-	4275	2	FSM	ENSG00000188647.13	ENST00000472967.2	1689	2	4	-2590	0	2590	multi-exon	FALSE	canonical	3	37	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATATACCCAAACATGTT	0	True	NA	NA	False	NA	NA	NA	69759955	69754532	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_69758705_69759852
H1_mix_00086802	chr9	-	656	2	NNC	ENSG00000188647.13	novel	1689	2	NA	NA	6	-560	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTGTTTTTCTTGTCC	20	True	NA	NA	False	NA	NA	NA	69759935	69757682	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_69758256_69759852
H1_mix_00086803	chr9	-	5084	25	NIC	ENSG00000083067.24	novel	12258	25	NA	NA	-314	-12832	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	9.53930101678781	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATTTTCTTATTTTTCT	NA	False	NA	NA	False	AATAAA	-45	NA	71121935	70548784	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_70549675_70552843_70553044_70553159_70553311_70591030_70591206_70598418_70598671_70603341_70603471_70610608_70610750_70615907_70616076_70618866_70619096_70620075_70620366_70621243_70621274_70625190_70625332_70635210_70635262_70639059_70639195_70640559_70640661_70681505_70681579_70761600_70761725_70784104_70784280_70811169_70811245_70827846_70828019_70843002_70843128_70846377_70846592_70862907_70863113_70864431_70864512_71121177
H1_mix_00086804	chr9	-	309	1	FSM	ENSG00000224437.2	ENST00000423148.2	505	1	92	104	92	-104	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGAAAGTGGACCTGTT	NA	False	NA	NA	False	NA	NA	NA	70917409	70917100	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_70917100_70917400
H1_mix_00086806	chr9	-	6156	24	FSM	ENSG00000135048.14	ENST00000377044.9	6152	24	0	-4	0	4	multi-exon	TRUE	canonical	3	89	junction_22	24.2718535210217	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTATGTGAATTTATT	-1	True	NA	2	True	AATAAA	-26	NA	71768513	71683361	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_71685394_71685742_71685847_71690091_71690247_71694508_71694608_71697984_71698205_71700641_71700825_71704594_71704804_71709258_71709475_71712082_71712261_71714933_71715090_71716516_71716553_71717947_71718080_71722426_71722516_71725580_71725710_71729844_71729915_71730047_71730254_71730704_71730915_71732350_71732521_71734805_71734995_71740062_71740233_71745017_71745580_71746200_71746342_71750042_71750386_71768356
H1_mix_00086807	chr9	-	5217	23	FSM	ENSG00000135048.14	ENST00000377066.9	5217	23	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_18	34.2247071355241	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGGCTCCACAGCCTGG	1078	False	NA	NA	False	NA	NA	NA	71768386	71683984	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_71685394_71685742_71685847_71690091_71690247_71694508_71694608_71697984_71698205_71700641_71700825_71704594_71704804_71709258_71709475_71712082_71712261_71714933_71715090_71716516_71716553_71717947_71718080_71722426_71722516_71725580_71725710_71729844_71729915_71730047_71730254_71730704_71730915_71732350_71732521_71740062_71740233_71745017_71745580_71746200_71746342_71750042_71750386_71768356
H1_mix_00086810	chr9	-	5841	7	FSM	ENSG00000107372.13	ENST00000376962.10	5841	7	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_5	245.949181742896	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGTAAGACTCCATTTT	2	True	NA	-26	True	AATAAA	-32	NA	72365208	72351412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_72356102_72356930_72357057_72359417_72359522_72360109_72360222_72360627_72360788_72363469_72363607_72364695
H1_mix_00086812	chr9	-	1073	7	FSM	ENSG00000107372.13	ENST00000343431.6	1073	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	340.133797203395	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCTTATAATTGATATT	6719	False	NA	29	True	NA	NA	NA	72364626	72355832	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_72356102_72356930_72357057_72359417_72359522_72360109_72360222_72360627_72360788_72363469_72363607_72364461
H1_mix_00086816	chr9	-	8058	1	Intergenic	novelGene_1562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	215	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTCTTTTGTGGTGGAAT	NA	False	NA	NA	False	NA	NA	NA	74093789	74085731	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_-_74085700_74093800
H1_mix_00086819	chr9	-	4310	9	NNC	ENSG00000156017.13	novel	4259	8	NA	NA	-52	-230	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_8	112.296204299166	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATAGTTGCTTGGTTTTCA	-3	True	NA	-5	True	ATTAAA	-21	NA	75028475	74981019	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_74983869_74984906_74985011_74996446_74996561_74998597_74998777_74999729_74999871_75016267_75016432_75017252_75017449_75027052_75027152_75028011
H1_mix_00086820	chr9	-	4231	12	NNC	ENSG00000106733.21	novel	2050	10	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	42.2741935229583	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATCTCAATCTTTTTTT	776	False	NA	NA	False	AATAAA	-13	NA	75088135	75060578	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_75060861_75060884_75061568_75066756_75066841_75068995_75069103_75069741_75069814_75069894_75070043_75077158_75077208_75077489_75077581_75078325_75078612_75078704_75080942_75083086_75083151_75088007
H1_mix_00086822	chr9	-	1474	10	NNC	ENSG00000106733.21	novel	2050	10	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_8	33.5625452617117	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTGGAATTCATTGTG	9	True	NA	-1	True	AATAAA	-19	NA	75088212	75061199	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_75061568_75066756_75066841_75068995_75069103_75069741_75069814_75069894_75070043_75077158_75077208_75077489_75077581_75078325_75078612_75083086_75083151_75088007
H1_mix_00086824	chr9	-	2692	4	FSM	ENSG00000135002.12	ENST00000376736.6	2596	4	-96	0	-5	0	multi-exon	FALSE	canonical	3	149	junction_1	12.675435561221	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTCTTTCCCTGTGTCA	-5	True	NA	-10	True	AATAAA	-17	NA	76394522	76385525	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_76387530_76388553_76388657_76392417_76392570_76394089
H1_mix_00086826	chr9	-	549	4	FSM	ENSG00000106772.19	ENST00000488346.5	791	4	0	242	0	-242	multi-exon	FALSE	canonical	3	8	junction_3	6.68331255192114	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTCGAGCTCAGCATGAA	2	True	NA	NA	False	NA	NA	NA	76692167	76644738	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_76644913_76652482_76652684_76655422_76655503_76692073
H1_mix_00086827	chr9	-	2599	7	FSM	ENSG00000156049.7	ENST00000341700.7	2497	7	-102	0	-102	0	multi-exon	FALSE	canonical	3	16	junction_2	2.40947204913349	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGGGTTATGTTGTGTT	775	False	NA	-2	True	AATATA	-15	NA	77648424	77423078	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_77424170_77425561_77425716_77428906_77429037_77431320_77431450_77434367_77434523_77529068_77529254_77647669
H1_mix_00086828	chr9	-	7310	7	FSM	ENSG00000156052.11	ENST00000286548.9	6882	7	-435	7	-435	-7	multi-exon	FALSE	canonical	3	301	junction_1	33.436506994601	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAACACCAAAAAACCT	241	False	NA	53	True	AATAAA	-23	NA	78032246	77716103	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_77721514_77728513_77728668_77794462_77794593_77797519_77797649_77815615_77815771_77922160_77922346_78031099
H1_mix_00086830	chr9	-	4137	20	FSM	ENSG00000196781.16	ENST00000376499.8	4135	20	0	-2	0	2	multi-exon	TRUE	canonical	3	382	junction_8	95.8684463354345	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTCCTTTTCTTTCTTT	-2	True	NA	81	True	AGTAAA	-20	NA	81689547	81583680	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_81584306_81584447_81584525_81585504_81585656_81587680_81587829_81590804_81591053_81593024_81593275_81610219_81610297_81611768_81611960_81613376_81613522_81615981_81616135_81616645_81616700_81620440_81620558_81633347_81633365_81634096_81634302_81652213_81652289_81653973_81654037_81685675_81685721_81685832_81685897_81687333_81687435_81688216
H1_mix_00086831	chr9	-	2232	12	NIC	ENSG00000196781.16	novel	4135	20	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	108	junction_8	141.305191075181	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTTTCCTTTTCTTTCTT	NA	False	NA	80	True	AGTAAA	-19	NA	81620557	81583681	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_81584306_81584447_81584525_81585504_81585656_81587680_81587829_81590804_81591053_81593024_81593275_81610219_81610297_81611768_81611957_81613376_81613522_81615981_81616135_81616645_81616700_81620440
H1_mix_00086832	chr9	-	3897	18	NIC	ENSG00000196781.16	novel	4135	20	NA	NA	16	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_12	156.151598772821	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTTCCTTTTCTTTCT	0	True	NA	79	True	AGTAAA	-18	NA	81689531	81583682	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_81584306_81584447_81584525_81585504_81585656_81587680_81587829_81590804_81591053_81593024_81593275_81610219_81610297_81611768_81611960_81613376_81613522_81615981_81616135_81616645_81616700_81620440_81620558_81652213_81652289_81653973_81654037_81685675_81685721_81685832_81685897_81687333_81687435_81688216
H1_mix_00086833	chr9	-	936	9	FSM	ENSG00000196781.16	ENST00000418319.5	936	9	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_3	177.808490728086	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCAGCCACTATGTAAGTA	1173	False	NA	NA	False	AAGAAA	-21	NA	81688448	81620453	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_81620558_81633347_81633365_81634096_81634302_81652183_81652289_81653973_81654037_81685675_81685721_81685832_81685897_81687333_81687435_81688216
H1_mix_00086835	chr9	-	2526	7	ISM	ENSG00000196781.16	ENST00000418319.5	936	9	-1083	13015	16	0	5prime_fragment	FALSE	canonical	3	131	junction_1	201.419476604313	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGGCTTGTGTTCTAAT	0	True	NA	-2	True	AATAAA	-18	NA	81689531	81633468	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_81634302_81652183_81652289_81653973_81654037_81685675_81685721_81685832_81685897_81687333_81687435_81688216
H1_mix_00086836	chr9	-	2509	7	ISM	ENSG00000196781.16	ENST00000376499.8	4135	20	3	49786	3	0	5prime_fragment	FALSE	canonical	3	402	junction_1	107.611957204269	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGGCTTGTGTTCTAAT	1	True	NA	-2	True	AATAAA	-18	NA	81689544	81633468	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_81634302_81652213_81652289_81653973_81654037_81685675_81685721_81685832_81685897_81687333_81687435_81688216
H1_mix_00086838	chr9	-	5699	17	FSM	ENSG00000165105.10	ENST00000376447.4	5585	17	-115	1	-80	-1	multi-exon	TRUE	canonical	2	12	junction_8	4.06922520266451	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTGAGTGTTTCCTTCA	NA	False	NA	-7	True	AATAAA	-16	NA	83063257	82979590	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_82982783_82990390_82990468_82992905_82993026_82997011_82997127_82998364_82998447_83000168_83000317_83000432_83000571_83000895_83001131_83004497_83004587_83005415_83005501_83007436_83007506_83009640_83009757_83012433_83012512_83015804_83015901_83022335_83022427_83025774_83025922_83062436
H1_mix_00086840	chr9	-	3873	11	FSM	ENSG00000135018.14	ENST00000376395.9	3868	11	0	-5	0	5	multi-exon	FALSE	canonical	3	276	junction_4	270.92980640749	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTTGCCTCTTTTGTA	-5	True	NA	-1	True	AATAAA	-21	NA	83707958	83659962	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_83661940_83663874_83664044_83665029_83665146_83666349_83666434_83669184_83669328_83677726_83677962_83678440_83678600_83679774_83680038_83682950_83683067_83686003_83686156_83707499
H1_mix_00086841	chr9	-	1805	13	FSM	ENSG00000165113.13	ENST00000376371.7	1801	13	0	-4	0	4	multi-exon	FALSE	canonical	1	11	junction_5	11.722189310117	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTGATTTGTTAAGTT	-11	True	NA	0	True	AATAAA	-22	NA	83817769	83739420	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_83739745_83741951_83742030_83742529_83742601_83748308_83748373_83753257_83753360_83768817_83768971_83780381_83780405_83784714_83784839_83788600_83788679_83799184_83799329_83806301_83806561_83816995_83817128_83817516
H1_mix_00086842	chr9	-	1515	12	FSM	ENSG00000165113.13	ENST00000376365.7	1511	12	0	-4	0	4	multi-exon	FALSE	canonical	2	10	junction_5	11.1473971316141	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTGATTTGTTAAGTT	182	False	NA	0	True	AATAAA	-22	NA	83817632	83739420	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_83739745_83741951_83742030_83742529_83742601_83748308_83748373_83753257_83753360_83780381_83780405_83784714_83784839_83788600_83788679_83799184_83799329_83806301_83806561_83816995_83817128_83817516
H1_mix_00086844	chr9	-	965	5	FSM	ENSG00000165115.15	ENST00000376347.1	1030	5	0	65	0	-65	multi-exon	FALSE	canonical	3	22	junction_2	2.04633819296811	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCACTGCTGTCCTTATTC	NA	False	NA	-70	True	NA	NA	NA	83889270	83880182	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_83880495_83883812_83884019_83887040_83887197_83888488_83888593_83889083
H1_mix_00086845	chr9	-	444	3	NNC	ENSG00000165115.15	novel	7257	18	NA	NA	8	-20835	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_2	11	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTGTGTTACTTAATGG	29	True	NA	2	True	AATAAA	-18	NA	83921424	83919530	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_83919814_83920105_83920213_83921370
H1_mix_00086846	chr9	-	2889	17	FSM	ENSG00000165119.21	ENST00000376263.8	2889	17	0	0	0	0	multi-exon	FALSE	canonical	3	3360	junction_16	1493.64121858087	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTGTGAAGTGTTT	-3	True	NA	-6	True	AATATA	-14	NA	83980215	83968082	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_83969441_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83973901_83973974_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372_83978453_83980152
H1_mix_00086847	chr9	-	2928	17	FSM	ENSG00000165119.21	ENST00000376281.8	2928	17	0	0	0	0	multi-exon	TRUE	canonical	3	5885	junction_16	1019.9985294107	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTGTGAAGTGTTT	7	True	NA	-6	True	AATATA	-14	NA	83980604	83968082	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_83969441_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83973901_83973974_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372_83978453_83980502
H1_mix_00086848	chr9	-	2652	16	FSM	ENSG00000165119.21	ENST00000351839.7	2652	16	0	0	0	0	multi-exon	FALSE	canonical	3	5714	junction_1	995.764148782231	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACACCCATGATGCTAG	2159	False	NA	-25	True	AATAAA	-1	NA	83978452	83968196	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_83969381_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83973901_83973974_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372
H1_mix_00086849	chr9	-	2040	17	FSM	ENSG00000165119.21	ENST00000360384.9	2038	17	0	-2	0	2	multi-exon	FALSE	canonical	3	3360	junction_16	1587.19707616721	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGGTCATTTTTTTTT	361	False	NA	-10	True	AATAAA	-16	NA	83980250	83968906	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_83969381_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83973901_83973974_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372_83978453_83980152
H1_mix_00086850	chr9	-	868	2	FSM	ENSG00000165119.21	ENST00000493362.1	868	2	0	0	0	0	multi-exon	FALSE	canonical	3	6876	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGGTTGGGGGGGGGAAG	9825	False	NA	-71	True	NA	NA	NA	83970786	83969197	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_83969441_83970161
H1_mix_00086851	chr9	-	528	4	FSM	ENSG00000165119.21	ENST00000492865.1	528	4	0	0	0	0	multi-exon	FALSE	canonical	3	6876	junction_1	775.341788431972	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATTCTAATGCAAGATATT	9465	False	NA	NA	False	NA	NA	NA	83971146	83969415	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_83969441_83970161_83970332_83970736_83970820_83970896
H1_mix_00086853	chr9	-	1283	15	FSM	ENSG00000165119.21	ENST00000457156.5	1283	15	0	0	0	0	multi-exon	FALSE	canonical	3	1293	junction_8	2401.93829042721	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGGTGGTCAGCGGATT	0	True	NA	NA	False	TTTAAA	-32	NA	83980190	83970312	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372_83978453_83980152
H1_mix_00086856	chr9	-	4586	26	FSM	ENSG00000135049.16	ENST00000357081.8	4464	26	0	-122	0	122	multi-exon	FALSE	canonical	3	154	junction_16	29.2173646997808	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGCTCATGCCTGTA	-23	True	NA	NA	False	GATAAA	-28	NA	85741954	85546416	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_85547287_85575314_85575476_85578919_85579097_85585462_85585595_85586830_85586961_85588297_85588479_85589527_85589682_85592559_85592705_85596361_85596450_85618982_85619132_85619214_85619302_85621201_85621286_85632661_85633375_85642826_85642944_85646320_85646419_85655142_85655321_85657434_85657644_85660935_85660974_85669484_85669579_85672549_85672682_85677435_85677583_85678334_85678399_85681267_85681336_85692688_85692814_85712501_85712567_85741774
H1_mix_00086857	chr9	-	4222	25	FSM	ENSG00000135049.16	ENST00000628899.1	4222	25	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_24	61.4898224415138	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCAGATAAGACTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	85742029	85546670	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_85547287_85575314_85575476_85578919_85579097_85585462_85585595_85586830_85586961_85588297_85588479_85589527_85589682_85592559_85592705_85596361_85596450_85618982_85619132_85619214_85619302_85621201_85621286_85632661_85633375_85642826_85642944_85646320_85646419_85655142_85655201_85657434_85657644_85660935_85660974_85669484_85669579_85672549_85672682_85677435_85677583_85678334_85678399_85681267_85681336_85692688_85692814_85741774
H1_mix_00086859	chr9	-	3046	10	FSM	ENSG00000135052.16	ENST00000388712.7	3046	10	0	0	0	0	multi-exon	FALSE	canonical	3	1122	junction_3	95.3272466329395	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACTTGTCACAGCTCTG	-10	True	NA	52	True	AATAAA	-18	NA	86099558	86026145	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_86027894_86033281_86033396_86035367_86035626_86036347_86036508_86040738_86040869_86046469_86046573_86052536_86052592_86077411_86077592_86079191_86079342_86099410
H1_mix_00086860	chr9	-	3029	10	FSM	ENSG00000135052.16	ENST00000388711.7	3022	10	0	-7	0	6	multi-exon	FALSE	canonical	3	51	junction_9	393.445401486175	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCACAGCTCTGTTTTTT	-7	True	NA	58	True	AATAAA	-24	NA	86100149	86026139	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_86027894_86033281_86033396_86035367_86035626_86036347_86036508_86040738_86040869_86046469_86046573_86052536_86052592_86077411_86077592_86079191_86079342_86100024
H1_mix_00086861	chr9	-	1967	4	FSM	ENSG00000135070.15	ENST00000375991.9	1967	4	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_3	20.5318181259127	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTTTTATTATTGAGGG	8	True	NA	NA	False	ATTAAA	-30	NA	86282538	86264545	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_86266192_86272006_86272113_86274188_86274243_86282377
H1_mix_00086862	chr9	-	5603	27	FSM	ENSG00000083223.18	ENST00000375963.8	5603	27	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_15	10.4861842045425	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATCTACATTATTTTCT	-6	True	NA	-8	True	AATAAA	-21	NA	86354410	86287732	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_86288745_86301275_86301602_86303085_86303202_86304855_86304948_86305191_86305240_86308428_86308607_86309211_86309290_86309462_86309577_86309927_86310018_86310705_86310810_86317218_86317277_86318957_86319059_86319583_86319671_86322324_86322476_86322872_86323961_86325333_86325515_86328339_86328493_86337418_86337539_86338822_86338950_86340035_86340106_86341001_86341054_86343074_86343164_86344976_86345155_86345668_86345786_86346298_86346481_86352679_86353231_86354270
H1_mix_00086863	chr9	-	5724	28	FSM	ENSG00000083223.18	ENST00000277141.10	5724	28	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_16	20.8410273858217	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATCTACATTATTTTCT	-6	True	NA	-8	True	AATAAA	-21	NA	86354410	86287732	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_86288745_86301275_86301602_86303085_86303202_86304855_86304948_86305191_86305240_86308428_86308607_86309211_86309290_86309462_86309577_86309927_86310018_86310705_86310810_86317218_86317277_86318957_86319059_86319583_86319671_86322324_86322476_86322872_86323961_86325333_86325515_86326370_86326492_86328339_86328493_86337418_86337539_86338822_86338950_86340035_86340106_86341001_86341054_86343074_86343164_86344976_86345155_86345668_86345786_86346298_86346481_86352679_86353231_86354270
H1_mix_00086864	chr9	-	10752	27	ISM	ENSG00000083223.18	ENST00000277141.10	5724	28	-68	7571	-24	-7569	5prime_fragment	FALSE	canonical	2	4	junction_15	21.221848739102	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTAAATGTATCAAATGAAG	-13	True	NA	NA	False	AATAAA	-15	NA	86354478	86295303	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_86301602_86303085_86303202_86304855_86304948_86305191_86305240_86308428_86308607_86309211_86309290_86309462_86309577_86309927_86310018_86310705_86310810_86317218_86317277_86318957_86319059_86319583_86319671_86322324_86322476_86322872_86323961_86325333_86325515_86326370_86326492_86328339_86328493_86337418_86337539_86338822_86338950_86340035_86340106_86341001_86341054_86343074_86343164_86344976_86345155_86345668_86345786_86346298_86346481_86352679_86353231_86354270
H1_mix_00086867	chr9	-	2155	2	FSM	ENSG00000269994.3	ENST00000669870.1	2245	2	90	0	90	0	multi-exon	TRUE	canonical	3	37	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAATTACTTTTTATCCA	NA	False	NA	-34	True	AATAGA	-5	NA	87042329	87008514	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_87010211_87041870
H1_mix_00086869	chr9	-	291	2	NNC	ENSG00000289166.1	novel	296	2	NA	NA	-26740	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	0	24	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTTTTTCTCCTCTTCCT	NA	False	NA	-15	True	AATAAA	-16	NA	87413369	87384845	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_87385077_87413309
H1_mix_00086871	chr9	-	2149	8	FSM	ENSG00000156345.18	ENST00000325303.9	2149	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	18.0611207191761	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGACTAGAGAAACTTATTC	10	True	NA	NA	False	AATAAA	-29	NA	87974533	87966440	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_87967660_87969193_87969350_87969795_87969920_87970567_87970631_87970775_87970898_87971146_87971336_87973921_87974036_87974371
H1_mix_00086873	chr9	-	2976	2	Intergenic	novelGene_1575	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	93	junction_1	0	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTCTGAGTGCTGGTT	5	False	NA	-4	True	AGTAAA	-18	NA	88044431	88037467	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_-_88040112_88044099
H1_mix_00086874	chr9	-	498	2	FSM	ENSG00000287750.2	ENST00000692550.1	484	2	-16	2	-16	-2	multi-exon	FALSE	canonical	3	15	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCTGTAATAATTCCTGC	8	False	NA	NA	False	AATAAA	-15	NA	88077875	88066436	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_88066782_88077722
H1_mix_00086875	chr9	-	9819	12	FSM	ENSG00000148082.10	ENST00000375835.9	9819	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	7.05117070169648	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCATTTGGATGATGGA	1	True	NA	1	True	AATAAA	-18	NA	89178818	89005770	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_89013576_89037992_89038289_89042025_89042185_89045745_89045834_89046843_89046995_89052036_89052164_89065528_89065581_89071198_89071253_89075108_89075229_89077839_89077904_89112555_89112627_89177986
H1_mix_00086876	chr9	-	547	2	FSM	ENSG00000224945.1	ENST00000456944.1	583	2	29	7	29	-7	multi-exon	FALSE	canonical	3	33	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAGACCCATTATGTCCA	NA	False	NA	-9	True	ATTAAA	-15	NA	89109269	89088610	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_89088936_89109047
H1_mix_00086879	chr9	-	4792	4	FSM	ENSG00000187764.12	ENST00000492386.5	2396	4	-2427	31	1478	-31	multi-exon	FALSE	canonical	3	11	junction_3	2.62466929133727	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTGGAAAAAATAAAAATAGA	NA	False	NA	NA	False	NA	NA	NA	89379709	89360821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_89362429_89363429_89363528_89363740_89363951_89376832
H1_mix_00086880	chr9	-	4620	17	NIC	ENSG00000187764.12	novel	4824	18	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_15	46.284446631671	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGGGAAGACATTCCTTA	-13	True	NA	0	True	AATAAA	-21	NA	89498108	89377234	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_89379630_89381054_89381099_89381173_89381347_89386366_89386483_89387385_89387609_89388635_89388793_89388871_89389048_89391263_89391416_89392422_89392537_89393561_89393656_89396736_89396836_89399275_89399339_89402870_89403017_89405350_89405700_89418055_89418119_89455887_89455954_89497918
H1_mix_00086881	chr9	-	4870	18	NNC	ENSG00000187764.12	novel	4824	18	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_16	72.6049175224579	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGGGAAGACATTCCTTA	-9	True	NA	0	True	AATAAA	-21	NA	89498104	89377234	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_89379630_89381054_89381099_89381173_89381347_89386366_89386483_89387385_89387609_89388635_89388793_89388871_89389048_89391263_89391416_89392422_89392537_89393561_89393656_89396736_89396836_89399275_89399339_89402870_89403017_89405350_89405700_89418055_89418119_89455887_89455954_89479571_89479826_89497918
H1_mix_00086882	chr9	-	4562	16	FSM	ENSG00000187764.12	ENST00000422704.7	4562	16	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_14	29.7538046119969	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGGGAAGACATTCCTTA	-18	True	NA	0	True	AATAAA	-21	NA	89498113	89377234	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_89379630_89381054_89381099_89381173_89381347_89386366_89386483_89387385_89387609_89388635_89388793_89388871_89389048_89391263_89391416_89392422_89392537_89393561_89393656_89396736_89396836_89399275_89399339_89402870_89403017_89405350_89405700_89455887_89455954_89497918
H1_mix_00086884	chr9	-	969	3	FSM	ENSG00000187764.12	ENST00000486935.2	969	3	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_2	5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCACGTCCTGGAAGTG	NA	False	NA	NA	False	NA	NA	NA	89381843	89379374	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_89379630_89381054_89381099_89381173
H1_mix_00086887	chr9	-	1574	10	FSM	ENSG00000148090.12	ENST00000375731.9	1574	10	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_9	21.5721585542884	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGAATTTTTCTCTTAC	-8	True	NA	-23	True	AATAAA	-17	NA	91361918	91213822	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_91214426_91216058_91216107_91217276_91217328_91220804_91220993_91296020_91296078_91297983_91298077_91325317_91325405_91355882_91355971_91356087_91356156_91361627
H1_mix_00086889	chr9	-	3905	9	ISM	ENSG00000169071.15	ENST00000375715.5	2993	13	165	159510	0	0	5prime_fragment	FALSE	canonical	2	16	junction_8	44.3085770477906	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATTGGCTCTCTTGCAG	3778	False	NA	-10	True	AATAAA	-14	NA	91948715	91722600	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_91725108_91726540_91726744_91730909_91731156_91733121_91733437_91737390_91737519_91756070_91756102_91757271_91757560_91775740_91775819_91948606
H1_mix_00086894	chr9	-	837	8	ISM	ENSG00000090054.16	ENST00000690139.1	2892	16	18	28019	0	19882	5prime_fragment	FALSE	canonical	2	8	junction_2	280.951154153899	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGATTCTTTTGAAGAAA	59	False	NA	NA	False	ACTAAA	-26	NA	92115384	92059178	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_92059309_92067965_92068099_92079433_92079567_92080015_92080089_92080869_92080964_92108739_92108835_92112454_92112563_92115313
H1_mix_00086898	chr9	-	4672	34	FSM	ENSG00000196305.19	ENST00000375643.7	4656	34	-16	0	0	0	multi-exon	FALSE	canonical	3	448	junction_33	354.916079269664	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAGGTGATAATTTGAGT	5166	False	92293733	-3	True	AATAAA	-15	NA	92293716	92210206	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293440
H1_mix_00086899	chr9	-	4576	35	FSM	ENSG00000196305.19	ENST00000447699.7	4587	35	16	-5	-6	1	multi-exon	FALSE	canonical	3	93	junction_5	447.38442864009	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGGTGATAATTTGAGTC	5142	False	NA	-2	True	AATAAA	-16	NA	92293740	92210205	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240642_92240692_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293610
H1_mix_00086900	chr9	-	4389	11	FSM	ENSG00000196305.19	ENST00000682521.1	4384	11	0	-5	0	0	multi-exon	FALSE	canonical	3	1834	junction_3	135.350988175188	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTAGACATCTAATAAAACT	NA	False	NA	-34	True	CATAAA	-33	NA	92252749	92210237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186
H1_mix_00086901	chr9	-	4535	35	FSM	ENSG00000196305.19	ENST00000683565.1	4535	35	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_33	473.404996443256	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTAGACATCTAATAAAACT	5	True	NA	-34	True	CATAAA	-33	NA	92293693	92210237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92290835_92290923_92293610
H1_mix_00086902	chr9	-	8649	32	FSM	ENSG00000196305.19	ENST00000682893.1	8644	32	0	-5	0	0	multi-exon	FALSE	canonical	3	1054	junction_31	314.880301985634	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTAGACATCTAATAAAACT	3	True	NA	-34	True	CATAAA	-33	NA	92293695	92210237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92251886_92253361_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293610
H1_mix_00086904	chr9	-	2957	14	FSM	ENSG00000196305.19	ENST00000684267.1	2953	14	0	-4	0	0	multi-exon	FALSE	canonical	3	18	junction_6	721.049924819939	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATGTGTTGAAAGTAAT	NA	False	NA	-17	True	AATAAA	-12	NA	92252746	92210344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92242613_92242688_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807
H1_mix_00086905	chr9	-	2933	13	FSM	ENSG00000196305.19	ENST00000684594.1	2929	13	0	-4	0	0	multi-exon	FALSE	canonical	3	22	junction_10	561.469568533228	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATGTGTTGAAAGTAAT	NA	False	NA	-17	True	AATAAA	-12	NA	92252746	92210344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249992_92250186_92250290_92250712_92250835_92251807
H1_mix_00086906	chr9	-	4447	34	FSM	ENSG00000196305.19	ENST00000683679.1	4443	34	0	-4	0	0	multi-exon	FALSE	canonical	3	78	junction_3	436.012605019095	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATGTGTTGAAAGTAAT	9	True	NA	-17	True	AATAAA	-12	NA	92293689	92210344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92210890_92222519_92222673_92223345_92223430_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293440
H1_mix_00086907	chr9	-	7618	34	FSM	ENSG00000196305.19	ENST00000472894.2	7614	34	0	-4	0	0	multi-exon	FALSE	canonical	3	93	junction_5	453.635394019328	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATGTGTTGAAAGTAAT	3	True	NA	-17	True	AATAAA	-12	NA	92293695	92210344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240642_92240692_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293610
H1_mix_00086908	chr9	-	4304	34	FSM	ENSG00000196305.19	ENST00000683469.1	4300	34	0	-4	0	0	multi-exon	FALSE	canonical	3	78	junction_3	401.350756511142	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATGTGTTGAAAGTAAT	5166	False	92293733	-17	True	AATAAA	-12	NA	92293716	92210344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92210890_92222519_92222673_92223345_92223430_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293610
H1_mix_00086909	chr9	-	2916	14	ISM	ENSG00000196305.19	ENST00000472894.2	7614	34	40957	4	8	-4	3prime_fragment	FALSE	canonical	3	93	junction_5	673.68807418699	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCAGATATAAATGTGTTG	NA	False	NA	-25	True	AATAAA	-4	NA	92252738	92210352	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240642_92240692_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807
H1_mix_00086913	chr9	-	4633	17	NNC	ENSG00000198000.12	novel	4053	18	NA	NA	-272	0	intron_retention	FALSE	non_canonical	1	37	junction_16	45.0428615321007	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCAGCCTAGGCTTTGT	NA	False	NA	-14	True	AATAAA	-19	NA	92325908	92297483	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_92297887_92298256_92298337_92298883_92298955_92299889_92300017_92301550_92301823_92305752_92305831_92306885_92307025_92310170_92310262_92310552_92310676_92311145_92311260_92314266_92316137_92318615_92318687_92319220_92319357_92321667_92321747_92323440_92323504_92324022_92324210_92325179
H1_mix_00086914	chr9	-	4075	17	FSM	ENSG00000198000.12	ENST00000442668.7	4075	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	47.7951357357629	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTGTTTTGGTGAATG	-1	True	NA	-1	True	GATAAA	-24	NA	92325350	92297357	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92297887_92298256_92298337_92298883_92298955_92299889_92300017_92301550_92301823_92305752_92305831_92306885_92307025_92310170_92310262_92310552_92310676_92311145_92311260_92314266_92316139_92318617_92318687_92319220_92319357_92321667_92321747_92323440_92323504_92324022_92324210_92325305
H1_mix_00086916	chr9	-	1238	3	FSM	ENSG00000198000.12	ENST00000463593.6	1238	3	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_2	16.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCAGCCTAGGCTTTGT	NA	False	NA	-14	True	AATAAA	-19	NA	92300026	92297483	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92297887_92298256_92298955_92299889
H1_mix_00086918	chr9	-	3958	17	NIC	ENSG00000198000.12	novel	4053	18	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	51.782258967237	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCAGCCTAGGCTTTGT	-22	True	NA	-14	True	AATAAA	-19	NA	92325371	92297483	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_92297887_92298256_92298337_92298883_92298955_92299889_92300017_92301550_92301823_92305752_92305831_92306885_92307025_92310170_92310262_92310552_92310676_92311145_92311260_92314266_92316139_92318617_92318687_92319220_92319357_92321667_92321747_92323440_92323504_92324022_92324210_92325317
H1_mix_00086927	chr9	-	4274	13	FSM	ENSG00000127080.10	ENST00000287996.8	4268	13	0	-6	0	6	multi-exon	FALSE	canonical	3	55	junction_4	14.0185888495716	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCTCCACGTTCACTGT	12	True	NA	NA	False	AATAAA	-27	NA	92670131	92613176	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92616058_92619485_92619566_92634385_92634489_92635157_92635309_92638000_92638281_92640709_92640783_92642751_92642811_92648058_92648149_92649452_92649575_92652572_92652640_92656455_92656552_92658633_92658682_92669907
H1_mix_00086928	chr9	-	6448	7	FSM	ENSG00000185963.14	ENST00000356884.11	6448	7	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_5	18.5539753152795	2903	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTCTCTGTGGTTGT	-2	True	NA	-4	True	AATAAA	-24	NA	92764833	92711362	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92715464_92717796_92717949_92718538_92719583_92720299_92720756_92722655_92722809_92729023_92729237_92764504
H1_mix_00086929	chr9	-	5767	4	FSM	ENSG00000127081.14	ENST00000332591.6	2836	4	0	-2931	0	1044	multi-exon	FALSE	canonical	3	21	junction_3	10.7082522694727	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTTTACAAACTTTGATA	18	True	NA	NA	False	NA	NA	NA	92878022	92843137	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92848552_92855810_92855904_92856191_92856319_92877889
H1_mix_00086930	chr9	-	5813	5	FSM	ENSG00000127081.14	ENST00000375495.8	4784	5	16	-1045	0	1045	multi-exon	FALSE	canonical	3	26	junction_3	8.52569645248997	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTTACAAACTTTGATAC	18	True	NA	NA	False	NA	NA	NA	92878022	92843136	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92848552_92855810_92855904_92856191_92856319_92875014_92875060_92877889
H1_mix_00086931	chr9	-	1244	4	FSM	ENSG00000131669.10	ENST00000375446.5	1237	4	0	-7	0	7	multi-exon	FALSE	canonical	3	336	junction_2	16.8193010820572	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCTGTTCCCGGGGCTG	-4	True	NA	-21	True	AATAAA	-32	NA	93134251	93121488	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_93122231_93124898_93125063_93126409_93126639_93134142
H1_mix_00086932	chr9	-	834	4	FSM	ENSG00000131669.10	ENST00000470314.5	834	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	167.949066353132	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCTCTCCCTCTCCCAA	9	True	NA	NA	False	NA	NA	NA	93134238	93121832	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_93122231_93124898_93125063_93126409_93126586_93134142
H1_mix_00086933	chr9	-	1989	5	FSM	ENSG00000204352.4	ENST00000648864.1	1154	5	-823	-12	-823	12	multi-exon	FALSE	canonical	3	15	junction_2	24.6513184231594	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACCTTTTCCGATAATT	NA	False	NA	NA	False	AATAAA	-29	NA	93347237	93318186	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_93318550_93319100_93319175_93335373_93335661_93335875_93335977_93346073
H1_mix_00086935	chr9	-	3468	3	FSM	ENSG00000204352.4	ENST00000649569.1	467	3	-669	-2332	-407	2332	multi-exon	FALSE	canonical	3	66	junction_2	3	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCACGTCTTGCATGGCA	NA	False	NA	77	True	NA	NA	NA	93346821	93333041	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_93335661_93335875_93335977_93346073
H1_mix_00086937	chr9	-	5922	3	FSM	ENSG00000188938.17	ENST00000375412.11	5922	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	21	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTGTAATTTAAAACATTA	-8	True	NA	-25	True	AATAAA	-16	NA	93453581	93443331	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_93447698_93450478_93450600_93452146
H1_mix_00086938	chr9	-	4924	3	FSM	ENSG00000188938.17	ENST00000423591.5	1800	3	38	-3162	0	0	multi-exon	FALSE	canonical	0	0	junction_1	147.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTGTAATTTAAAACATTA	-16	True	NA	-25	True	AATAAA	-16	NA	93451524	93443331	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_93447698_93450478_93450600_93451087
H1_mix_00086941	chr9	-	1516	4	FSM	ENSG00000131668.14	ENST00000253968.11	1511	4	0	-5	0	5	multi-exon	FALSE	canonical	3	13	junction_3	5.09901951359278	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGGTGGAGCAGCTTCTGA	-1	True	NA	1	True	AATAAA	-22	NA	93955355	93951621	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_93952329_93952728_93952814_93952895_93953188_93954923
H1_mix_00086942	chr9	-	425	1	FSM	ENSG00000282886.1	ENST00000635020.1	330	1	41	-136	41	136	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGATGACACACACTCTCC	NA	False	NA	NA	False	NA	NA	NA	94347522	94347097	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_94347100_94347500
H1_mix_00086943	chr9	-	1524	7	FSM	ENSG00000165140.12	ENST00000375326.9	1473	7	-52	1	-52	0	multi-exon	FALSE	canonical	2	7	junction_6	2.06155281280883	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTCCCTTGCTTTGTGTC	715	False	NA	NA	False	AATAAA	-21	NA	94639570	94603133	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_94603573_94605456_94605577_94606814_94606953_94609920_94610062_94617767_94617861_94620328_94620492_94639140
H1_mix_00086944	chr9	-	4534	15	FSM	ENSG00000158169.13	ENST00000375305.6	4533	15	0	-1	0	0	multi-exon	TRUE	canonical	1	4	junction_14	15.025997878507	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGTATCCATTAAATATT	450	False	NA	0	True	AATAAA	-19	NA	95317254	95099053	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_95101851_95107065_95107270_95111462_95111638_95114628_95114711_95117314_95117391_95125085_95125186_95126528_95126582_95135345_95135503_95149922_95150088_95171078_95171144_95172036_95172148_95240648_95240744_95247431_95247517_95249126_95249370_95317128
H1_mix_00086946	chr9	-	2425	14	FSM	ENSG00000158169.13	ENST00000490972.7	2387	14	-38	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	13.9402783669031	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCCACGTATGTATTTGA	-5	True	NA	NA	False	AATAAA	-18	NA	95317709	95110511	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_95111346_95111462_95111638_95114628_95114711_95117314_95117391_95125085_95125186_95126528_95126582_95135345_95135503_95149922_95150088_95171078_95171144_95172036_95172148_95240648_95240744_95247431_95247517_95249126_95249370_95317525
H1_mix_00086948	chr9	-	8627	24	FSM	ENSG00000185920.18	ENST00000331920.11	8662	24	0	35	0	-35	multi-exon	FALSE	canonical	3	11	junction_2	5.68651773337137	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAGGGAACATAAATAAAGC	-9	True	NA	-43	True	NA	NA	NA	95509266	95443014	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_95446392_95446910_95447452_95449068_95449324_95449840_95449941_95453477_95453621_95456275_95456414_95458012_95458294_95459599_95459784_95461855_95461999_95467115_95467426_95468750_95469154_95469812_95469932_95476033_95476160_95476758_95476858_95477546_95477703_95478054_95478187_95478999_95479148_95479968_95480091_95480389_95480589_95481948_95482041_95482133_95482204_95485684_95485875_95506406_95506600_95508160
H1_mix_00086950	chr9	-	1337	9	FSM	ENSG00000130958.13	ENST00000375259.9	1337	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	56.0535458289661	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGCCTCATCATGTGAT	13	True	NA	-10	True	AATAAA	-13	NA	96383689	96320709	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_96321342_96321997_96322081_96324090_96324170_96351102_96351172_96352037_96352110_96360153_96360222_96364463_96364551_96368271_96368306_96383476
H1_mix_00086952	chr9	-	1496	11	NIC	ENSG00000130958.13	novel	1623	12	NA	NA	9	-2	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	45.8610946227846	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTATGCCTCATCATGTG	33	False	NA	-12	True	AATAAA	-11	NA	96383669	96320711	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_96321342_96324090_96324170_96336716_96336785_96343903_96343997_96345298_96345402_96351102_96351172_96352037_96352110_96360153_96360222_96364463_96364551_96368271_96368306_96383476
H1_mix_00086953	chr9	-	1295	6	FSM	ENSG00000130958.13	ENST00000375257.2	886	6	-69	-340	-36	340	multi-exon	FALSE	canonical	3	113	junction_2	31.4133729484753	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTTGGGAAACATTGTGA	NA	False	NA	NA	False	NA	NA	NA	96383747	96350408	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_96351172_96352037_96352110_96360153_96360222_96364463_96364551_96368271_96368306_96383476
H1_mix_00086954	chr9	-	3687	5	FSM	ENSG00000165244.7	ENST00000375256.5	3687	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_4	5.40254569624358	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAGTACACGGTCATTC	-15	True	NA	-16	True	AATAAA	-20	NA	96418370	96385940	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_96388460_96392397_96392537_96394822_96394943_96398163_96398315_96417612
H1_mix_00086956	chr9	-	5409	13	NIC	ENSG00000081377.17	novel	2965	14	NA	NA	-56	1	combination_of_known_junctions	FALSE	canonical	3	11	junction_12	66.014045222715	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTATTGTGTTACTT	NA	False	NA	1	True	ATTAAA	-20	NA	96567310	96500106	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_96503790_96522505_96522604_96523260_96523421_96523586_96523726_96533926_96534158_96534454_96534543_96539077_96539141_96541825_96541893_96551795_96551873_96562692_96562786_96564776_96564853_96565392_96565484_96566767
H1_mix_00086957	chr9	-	5608	14	FSM	ENSG00000081377.17	ENST00000375241.6	5602	14	0	-6	0	1	multi-exon	FALSE	canonical	3	88	junction_2	48.5836069462255	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTATTGTGTTACTT	-17	True	NA	1	True	ATTAAA	-20	NA	96619843	96500106	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_96503790_96509672_96509790_96522505_96522604_96523260_96523421_96523586_96523726_96533926_96534158_96534454_96534543_96539077_96539141_96541825_96541893_96551795_96551873_96562692_96562786_96564776_96564853_96565392_96565484_96619218
H1_mix_00086959	chr9	-	5740	14	FSM	ENSG00000081377.17	ENST00000463569.5	1734	14	-465	-3541	-22	84	multi-exon	FALSE	canonical	3	23	junction_1	66.6138745609627	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTAAGTTTTCTAGGACG	-39	True	NA	84	True	CATAAA	-20	NA	96619865	96500023	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_96503790_96515648_96515793_96522505_96522604_96523260_96523421_96523586_96523726_96533926_96534158_96534454_96534543_96539077_96539141_96541825_96541893_96551795_96551873_96562692_96562786_96564776_96564853_96565392_96565484_96619218
H1_mix_00086960	chr9	-	2899	6	FSM	ENSG00000158122.12	ENST00000375234.8	2899	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	7.95989949685296	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTTTGTGCTTTTTTTAT	-14	True	NA	NA	False	AATAAA	-21	NA	96655317	96639576	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_96641887_96645892_96646025_96651389_96651496_96651658_96651713_96654704_96654774_96655089
H1_mix_00086961	chr9	-	6928	6	FSM	ENSG00000081386.13	ENST00000375231.5	5616	6	0	-1312	0	0	multi-exon	FALSE	canonical	3	7	junction_5	18.0488226762856	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATGTCTACACATTTAAT	23	True	NA	-3	True	AATAAA	-20	NA	96778056	96754552	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_96760478_96763117_96763214_96763505_96763633_96774787_96774847_96775999_96776246_96777581
H1_mix_00086962	chr9	-	6507	6	FSM	ENSG00000081386.13	ENST00000223428.9	6507	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	11.2712022428843	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATGTCTACACATTTAAT	-8	True	NA	-3	True	AATAAA	-20	NA	96778087	96754552	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_96760478_96763117_96763214_96763505_96763633_96774787_96774847_96775999_96776246_96778033
H1_mix_00086963	chr9	-	7014	9	Fusion	ENSG00000196597.13_ENSG00000081386.13	novel	6507	6	NA	NA	0	0	multi-exon	FALSE	canonical	3	17	junction_8	13.5092560861063	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATGTCTACACATTTAAT	151	False	NA	-3	True	AATAAA	-20	NA	96854360	96754552	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr9_-_96760478_96763117_96763214_96763505_96763633_96774787_96774847_96775999_96776246_96827079_96827182_96844889_96845017_96851946_96852006_96854087
H1_mix_00086965	chr9	-	548	5	FSM	ENSG00000196312.15	ENST00000506067.1	548	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	12.6169528809455	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGATAATCAGTGCATGCAG	NA	False	NA	NA	False	AAGAAA	-11	NA	96949585	96898065	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_96898128_96918642_96918827_96933794_96933916_96942602_96942753_96949554
H1_mix_00086967	chr9	-	1177	4	NIC	ENSG00000196312.15	novel	1246	8	NA	NA	8	258	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	228.172936363822	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCATGCCTGCAATCGCAG	7	True	NA	NA	False	AGTAAA	-15	NA	97013592	96933263	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_96933916_96949554_96949683_96958834_96958898_97013258
H1_mix_00086968	chr9	-	1996	5	FSM	ENSG00000196312.15	ENST00000637864.1	1802	5	-108	-86	0	86	multi-exon	FALSE	canonical	3	51	junction_1	163.394270095374	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTATCGTCACCCGTGAGA	NA	False	NA	85	True	NA	NA	NA	97013708	96942826	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_96944086_96949554_96949683_96958834_96958898_96972852_96972949_97013258
H1_mix_00086969	chr9	-	947	5	NNC	ENSG00000196312.15	novel	1802	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_1	139.385033271151	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTCTATTCTAATGAA	NA	False	NA	0	True	AATAAA	-17	NA	97013675	96942911	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_96943155_96949554_96949683_96958834_96958898_96972852_96972949_97013258
H1_mix_00086971	chr9	-	4485	8	FSM	ENSG00000136943.12	ENST00000680385.1	4481	8	0	-4	0	4	multi-exon	FALSE	canonical	3	20	junction_3	753.603506426263	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTTCTGCAGTGTATT	-1	True	NA	6	True	AGTAAA	-23	NA	97039142	97029672	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_97033049_97034725_97034844_97035527_97035694_97036400_97036748_97037251_97037399_97037492_97037616_97037917_97038054_97039070
H1_mix_00086972	chr9	-	4497	9	FSM	ENSG00000136943.12	ENST00000681927.1	4497	9	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_8	890.940505519308	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTCTTGTTCTGCAGTG	-1	True	NA	2	True	AGTAAA	-19	NA	97039142	97029676	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_97033049_97034725_97034844_97035527_97035694_97036522_97036748_97037251_97037399_97037492_97037616_97037917_97038054_97038410_97038549_97039070
H1_mix_00086973	chr9	-	3819	2	FSM	ENSG00000136943.12	ENST00000679917.1	767	2	-1095	-1957	896	0	multi-exon	FALSE	canonical	3	1952	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGGCCTTTTTTTAATGC	2500	False	NA	-26	True	AATAAA	-19	NA	97037157	97032654	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_97034844_97035527
H1_mix_00086974	chr9	-	1372	8	FSM	ENSG00000136943.12	ENST00000680221.1	1372	8	0	0	0	0	multi-exon	TRUE	canonical	2	154	junction_4	710.677141886525	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGGCCTTTTTTTAATGC	2	True	NA	-26	True	AATAAA	-19	NA	97039139	97032654	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_97033049_97034725_97034844_97035527_97035694_97036522_97036742_97037251_97037399_97037492_97037616_97037917_97038054_97039070
H1_mix_00086975	chr9	-	1512	8	FSM	ENSG00000136943.12	ENST00000681737.1	1512	8	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_7	706.695269604681	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGGCCTTTTTTTAATGC	1	True	NA	-26	True	AATAAA	-19	NA	97039140	97032654	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_97033049_97034725_97034844_97035527_97035694_97036522_97036748_97037251_97037399_97037492_97037616_97037917_97038054_97038937
H1_mix_00086976	chr9	-	1715	7	FSM	ENSG00000136943.12	ENST00000680159.1	1715	7	0	0	0	0	multi-exon	FALSE	canonical	3	1952	junction_2	169.532363347599	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGGCCTTTTTTTAATGC	483	False	NA	-26	True	AATAAA	-19	NA	97039174	97032654	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_97033049_97034725_97034844_97035527_97035694_97036522_97036748_97037251_97037399_97037492_97038054_97039070
H1_mix_00086980	chr9	-	1209	1	FSM	ENSG00000188801.9	ENST00000568013.1	1209	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGGCGAGAAGCTGTAATA	NA	False	NA	NA	False	NA	NA	NA	97199511	97198302	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_97198300_97199500
H1_mix_00086982	chr9	-	661	2	FSM	ENSG00000203279.5	ENST00000662325.2	672	2	13	-2	7	2	multi-exon	FALSE	canonical	3	182	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGTTTTCCCTAGGTTTTA	-27	True	NA	NA	False	AATAAA	-44	NA	97238745	97237747	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_97238086_97238422
H1_mix_00086983	chr9	-	3076	1	FSM	ENSG00000136925.15	ENST00000375173.1	3076	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGAAGAGTGTGCCGTTT	NA	False	NA	-1	True	AATAAA	-25	NA	97603155	97600079	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_97600100_97603200
H1_mix_00086986	chr9	-	1584	7	FSM	ENSG00000136936.11	ENST00000462523.5	1584	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	32.5047005147802	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTTTCTGTACTCTTG	77	False	NA	-1	True	AATAAA	-22	NA	97697293	97674908	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_97675588_97682199_97682431_97684922_97685041_97687095_97687262_97689533_97689640_97693648_97693760_97697120
H1_mix_00086987	chr9	-	1400	6	FSM	ENSG00000136936.11	ENST00000375128.5	1400	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	3.13687742827162	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTTTCTGTACTCTTG	-17	True	NA	-1	True	AATAAA	-22	NA	97697340	97674908	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_97675588_97684922_97685041_97687095_97687262_97689533_97689640_97693648_97693760_97697120
H1_mix_00086989	chr9	-	1590	5	FSM	ENSG00000136932.15	ENST00000375119.8	1577	5	0	-13	0	13	multi-exon	FALSE	canonical	3	15	junction_3	6.41774882649672	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTGAAAGAAGCTGTTC	12	True	NA	55	True	ATTAAA	-28	NA	97922500	97904475	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_97904993_97909959_97910617_97913400_97913559_97916163_97916339_97922417
H1_mix_00086990	chr9	-	4480	6	FSM	ENSG00000106785.15	ENST00000341469.7	4480	6	0	0	0	0	multi-exon	FALSE	canonical	1	33	junction_4	28.2658804922118	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGTCTTCACTGGGAGT	-6	True	NA	-1	True	AATAAA	-23	NA	98119222	98084352	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_98088006_98091908_98092002_98094866_98095030_98099930_98100165_98109888_98109985_98118981
H1_mix_00086992	chr9	-	5459	12	FSM	ENSG00000106789.13	ENST00000375077.5	5456	12	0	-3	0	3	multi-exon	TRUE	canonical	3	214	junction_11	20.6020940923911	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTCCTTTTCTTGATTTG	12	True	NA	1	True	AATAAA	-25	NA	98192637	98120971	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_98124906_98126548_98126824_98128169_98128261_98128606_98128720_98129793_98129891_98130954_98131060_98132184_98132302_98133037_98133218_98134805_98134956_98137571_98137689_98157459_98157661_98192558
H1_mix_00086994	chr9	-	3293	13	FSM	ENSG00000095383.20	ENST00000465784.7	3265	13	19	-47	3	47	multi-exon	FALSE	canonical	3	12	junction_11	7.26674311886388	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCACCACCAGGCTTCC	13	True	NA	50	True	NA	NA	NA	98255630	98198963	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_98199589_98200252_98200375_98201478_98201665_98203287_98203409_98208667_98209145_98210655_98210844_98213107_98213219_98220832_98221229_98228951_98229149_98233415_98233550_98243993_98244130_98251784_98251927_98255172
H1_mix_00086995	chr9	-	2281	9	FSM	ENSG00000165138.18	ENST00000444472.5	2272	9	0	-9	0	9	multi-exon	FALSE	canonical	3	65	junction_1	117.845701555042	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGACTACATTCATCCAA	7593	False	NA	1	True	ATTAAA	-22	NA	98777426	98731319	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_98732554_98736495_98736624_98745558_98745676_98751028_98751097_98756419_98756607_98768080_98768251_98770895_98771047_98773876_98774081_98777404
H1_mix_00086996	chr9	-	6642	14	NIC	ENSG00000165138.18	novel	7190	15	NA	NA	29	0	intron_retention	FALSE	canonical	3	199	junction_4	114.819848602653	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCTTGCAGAAGGAATCT	18	True	NA	-15	True	AATAAA	-23	NA	98796510	98732008	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_98736624_98745558_98745676_98751028_98751097_98756419_98756604_98768080_98768251_98770895_98771047_98773876_98774081_98777404_98777455_98778225_98778425_98780188_98780338_98782466_98782574_98783952_98784158_98784831_98784877_98796132
H1_mix_00086997	chr9	-	3932	16	NIC	ENSG00000165138.18	novel	7190	15	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	65	junction_1	138.313106955037	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCCCACTTTGACTACAT	-27	True	NA	-7	True	ATTAAA	-14	NA	98796555	98731327	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_98732554_98736495_98736624_98745558_98745676_98751028_98751097_98756419_98756607_98768080_98768251_98770895_98771047_98773876_98774081_98777404_98777455_98778225_98778425_98780188_98780338_98782466_98782574_98783952_98784158_98784831_98784877_98790103_98790607_98796132
H1_mix_00086998	chr9	-	7855	15	FSM	ENSG00000165138.18	ENST00000353234.5	7190	15	16	-681	0	1	multi-exon	FALSE	canonical	3	199	junction_4	112.020884532432	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCCCACTTTGACTACAT	-11	True	NA	-7	True	ATTAAA	-14	NA	98796539	98731327	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_98736624_98745558_98745676_98751028_98751097_98756419_98756604_98768080_98768251_98770895_98771047_98773876_98774081_98777404_98777455_98778225_98778425_98780188_98780338_98782466_98782574_98783952_98784158_98784831_98784877_98790103_98790607_98796132
H1_mix_00086999	chr9	-	3175	16	NIC	ENSG00000165138.18	novel	7190	15	NA	NA	23	1	combination_of_known_junctions	FALSE	canonical	3	99	junction_1	125.848409692861	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTGGCTTGCAGAAGGAA	12	True	NA	-18	True	AATAAA	-20	NA	98796516	98732011	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_98732554_98736526_98736624_98745558_98745676_98751028_98751097_98756419_98756604_98768080_98768251_98770895_98771047_98773876_98774081_98777404_98777455_98778225_98778425_98780188_98780338_98782466_98782574_98783952_98784158_98784831_98784877_98790103_98790607_98796132
H1_mix_00087000	chr9	-	2683	15	NIC	ENSG00000165138.18	novel	2586	15	NA	NA	12	1	combination_of_known_splicesites	FALSE	canonical	3	99	junction_1	130.584654691186	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTGGCTTGCAGAAGGAA	1	True	NA	-18	True	AATAAA	-20	NA	98796527	98732011	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_98732554_98736526_98736624_98745558_98745676_98751028_98751097_98756419_98756604_98768080_98768251_98770895_98771047_98773876_98774081_98777404_98777455_98778225_98778425_98780188_98780338_98782466_98782574_98783952_98784158_98784831_98784877_98796132
H1_mix_00087001	chr9	-	1087	5	NNC	ENSG00000165138.18	novel	646	3	NA	NA	24	2271	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	241.724404022432	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATATTTTGCCTACTGGG	13	True	NA	-5	True	AATAAA	-15	NA	98796515	98781298	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_98781646_98782466_98782574_98783952_98784158_98784831_98784877_98796132
H1_mix_00087002	chr9	-	1040	3	NIC	ENSG00000165138.18	novel	7190	15	NA	NA	3	3	combination_of_known_splicesites	FALSE	canonical	3	412	junction_2	155	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCGTCTTGTGATGATTG	-8	True	NA	-4	True	AGTAAA	-19	NA	98796536	98783566	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_98784158_98784831_98784877_98796132
H1_mix_00087003	chr9	-	1544	4	ISM	ENSG00000165138.18	ENST00000353234.5	7190	15	16	51560	0	1	5prime_fragment	FALSE	canonical	3	288	junction_3	196.044779465191	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTCGTCTTGTGATGAT	-11	True	NA	-6	True	AGTAAA	-17	NA	98796539	98783568	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_98784158_98784831_98784877_98790103_98790607_98796132
H1_mix_00087006	chr9	-	2967	3	FSM	ENSG00000119523.10	ENST00000238477.5	2966	3	0	-1	0	0	multi-exon	FALSE	canonical	3	39	junction_2	1.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTTGGCATTGTGAAA	-14	True	NA	-1	True	ATTAAA	-18	NA	99221942	99216424	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_99218837_99220978_99221138_99221546
H1_mix_00087009	chr9	-	4808	12	FSM	ENSG00000023318.9	ENST00000262455.7	4808	12	0	0	0	0	multi-exon	FALSE	canonical	3	520	junction_10	41.4804544234216	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAGTAAAAAAAAAAAA	5	True	NA	NA	False	AATAAA	-21	NA	100099000	99979184	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_99982714_99984966_99985070_100006505_100006648_100007577_100007690_100016321_100016439_100018255_100018314_100020615_100020732_100022041_100022227_100052416_100052533_100057819_100057860_100060099_100060173_100098783
H1_mix_00087011	chr9	-	298	1	FSM	ENSG00000270995.1	ENST00000603444.1	466	1	9	159	9	-159	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTCAACAGATTTTTCTC	NA	False	NA	NA	False	AAGAAA	-24	NA	100120891	100120593	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_100120600_100120900
H1_mix_00087014	chr9	-	3077	15	FSM	ENSG00000136891.14	ENST00000374902.9	3077	15	0	0	0	0	multi-exon	FALSE	canonical	3	550	junction_12	64.6649133642671	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACGAACCTTCTTTCTT	-14	True	NA	-14	True	ATTAAA	-18	NA	100352942	100302083	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_100302305_100303631_100303843_100308499_100308682_100310298_100310380_100320264_100320399_100321682_100321772_100326301_100326480_100327786_100327963_100329139_100329276_100329930_100330170_100340256_100340370_100346071_100346316_100346693_100347407_100349183_100349373_100352771
H1_mix_00087016	chr9	-	1035	3	NNC	ENSG00000136897.8	novel	3336	2	NA	NA	0	35679	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	612	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGCTTCATTGCAAAATCA	-9	True	NA	NA	False	AAAAAG	-3	NA	101398618	101351953	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_101351987_101389966_101390851_101398500
H1_mix_00087017	chr9	-	3336	2	FSM	ENSG00000136897.8	ENST00000374865.5	3336	2	0	0	0	0	multi-exon	FALSE	canonical	3	1224	junction_1	0	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACGTGTCATTTTTCTGA	-9	True	NA	-2	True	AATAAA	-16	NA	101398618	101387632	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_101390851_101398500
H1_mix_00087020	chr9	-	10490	50	FSM	ENSG00000165029.17	ENST00000678995.1	10413	50	-74	-3	-74	2	multi-exon	FALSE	canonical	2	2	junction_27	7.36901445315646	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTACTTTTGTGCATTTG	NA	False	NA	1	True	AATAAA	-28	NA	104928229	104781003	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_104784456_104785395_104785640_104786297_104786391_104786872_104786977_104787919_104788055_104788425_104788568_104790921_104791029_104791935_104791999_104792785_104792907_104793170_104793301_104794386_104794511_104796052_104796198_104796308_104796425_104798420_104798599_104799818_104799989_104800509_104800585_104802053_104802160_104803283_104803317_104804625_104804721_104806240_104806431_104809465_104809565_104810799_104810925_104812573_104812723_104814117_104814232_104814426_104814476_104816142_104816346_104817225_104817305_104818662_104818884_104819585_104819724_104819926_104820070_104821374_104821507_104822495_104822668_104824464_104824579_104825682_104825888_104826947_104827170_104828915_104829139_104830924_104831102_104831621_104831828_104832573_104832772_104836979_104837097_104837427_104837568_104840278_104840520_104845476_104845570_104858521_104858699_104861678_104861801_104883038_104883158_104884426_104884569_104889101_104889196_104903613_104903772_104927934
H1_mix_00087021	chr9	-	2706	4	FSM	ENSG00000136826.15	ENST00000493306.1	2706	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	1.88561808316413	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTTTTTTATTGTTTTG	358	False	NA	NA	False	AATAAA	-21	NA	107489437	107484851	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_107485927_107487027_107488268_107488929_107489051_107489167
H1_mix_00087024	chr9	-	5818	37	FSM	ENSG00000070061.16	ENST00000674948.1	5951	37	232	-99	0	77	multi-exon	FALSE	canonical	3	70	junction_36	37.8482186413177	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTATCAATTACTGTTTC	4	True	NA	NA	False	AAGAAA	-20	NA	108934096	108867438	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_108869183_108874894_108874971_108877994_108878150_108878622_108878751_108879445_108879558_108880051_108880166_108881704_108881766_108882124_108882188_108889331_108889394_108891202_108891405_108892985_108893084_108893942_108894067_108896495_108896645_108896952_108897039_108897147_108897286_108898501_108898582_108898670_108898750_108899821_108899896_108900259_108900376_108901424_108901531_108901627_108901682_108902838_108902943_108903562_108903670_108906302_108906486_108908304_108908405_108911009_108911181_108912263_108912495_108916203_108916298_108917546_108917671_108918810_108918902_108919252_108919350_108922841_108922928_108926522_108926604_108927371_108927454_108929768_108929922_108930996_108931057_108933863
H1_mix_00087025	chr9	-	5974	37	FSM	ENSG00000070061.16	ENST00000675765.1	5974	37	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_13	47.1329548415837	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGAATTTTCCTGGACA	-22	True	NA	NA	False	AGTAAA	-17	NA	108934122	108867515	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_108869183_108874894_108874971_108877994_108878150_108878622_108878751_108879445_108879558_108880051_108880166_108881704_108881766_108882124_108882188_108889331_108889394_108891202_108891405_108892985_108893084_108893942_108894067_108896495_108896645_108896890_108897039_108897147_108897286_108898501_108898582_108898670_108898750_108899821_108899896_108900259_108900376_108901424_108901531_108901627_108901682_108902838_108902943_108903562_108903670_108906302_108906486_108908304_108908405_108911009_108911181_108912263_108912495_108916203_108916298_108917546_108917671_108918810_108918902_108919252_108919350_108922841_108922928_108926522_108926604_108927371_108927454_108929768_108929922_108930996_108931202_108933863
H1_mix_00087028	chr9	-	2522	19	FSM	ENSG00000119326.15	ENST00000374595.8	2522	19	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_1	178.351781669518	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAGTGTGATTTTTAAAA	-1	True	NA	0	True	AATAAA	-26	NA	109013522	108942568	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_108942872_108942960_108943045_108943702_108943817_108943961_108944019_108948185_108948235_108952208_108952364_108952443_108952495_108955789_108955828_108965377_108965529_108970401_108970495_108972674_108972834_108976961_108977049_108979280_108979482_108983144_108983316_108984346_108984437_108990725_108990846_108992631_108992820_108999066_108999257_109013301
H1_mix_00087029	chr9	-	7948	17	NIC	ENSG00000106771.13	novel	7999	18	NA	NA	10	-17	combination_of_known_junctions	FALSE	canonical	3	210	junction_13	28.0306054831143	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGTGGTAAACTTAATCT	8	True	NA	-15	True	AATAAA	-20	NA	109119937	109015151	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_109020506_109033306_109033502_109036205_109036381_109038016_109038118_109050282_109050429_109050569_109050693_109057190_109057323_109060353_109060453_109064476_109064568_109073355_109073439_109080838_109080944_109087172_109087343_109090921_109091156_109093474_109093592_109106507_109106610_109108452_109108571_109119334
H1_mix_00087030	chr9	-	8149	5	FSM	ENSG00000260230.5	ENST00000561981.5	8155	5	0	6	0	-6	multi-exon	FALSE	canonical	0	0	junction_1	2.17944947177034	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTATTGCTTTGCTCTGG	36	False	109167285	NA	False	ATTAAA	-14	NA	109167249	109130298	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_109137628_109141342_109141590_109147050_109147190_109149635_109149721_109166900
H1_mix_00087031	chr9	-	4006	16	FSM	ENSG00000095203.15	ENST00000374557.4	4006	16	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_1	24.1765726823855	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTTGAGTGGTTTCAGT	44	True	NA	-4	True	AATAAA	-17	NA	109320964	109239730	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_109241810_109243617_109243683_109247755_109247790_109251480_109251512_109253440_109253551_109255510_109255681_109255773_109255844_109256135_109256225_109256392_109256481_109258176_109258298_109263049_109263103_109264979_109265025_109267472_109267552_109268390_109268434_109279816_109279922_109320140
H1_mix_00087032	chr9	-	6739	26	FSM	ENSG00000070159.14	ENST00000374541.4	6704	26	-36	1	-30	-1	multi-exon	FALSE	canonical	2	6	junction_13	7.48267331907521	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTTATTGTCTGTTGA	NA	False	NA	NA	False	TATAAA	-18	NA	109498343	109375700	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_109379634_109381651_109381788_109382301_109382448_109383422_109383552_109389232_109389380_109391137_109391200_109391470_109391562_109404447_109404609_109406461_109406619_109408320_109408378_109409998_109410077_109410228_109410416_109420423_109420601_109422717_109422853_109426949_109427123_109428620_109428685_109433072_109433162_109436882_109436971_109438113_109438235_109445239_109445293_109448810_109448856_109454495_109454575_109457172_109457216_109457291_109457400_109463296_109463452_109498218
H1_mix_00087033	chr9	-	407	1	FSM	ENSG00000228053.1	ENST00000418441.1	478	1	75	-4	75	4	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTTTAAAAAATAAATAAAT	114	False	NA	NA	False	NA	NA	NA	110025283	110024876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_110024900_110025300
H1_mix_00087034	chr9	-	484	4	FSM	ENSG00000136810.13	ENST00000374515.9	635	4	0	151	0	57	multi-exon	FALSE	canonical	3	7	junction_2	3793.19569170318	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCCTATATTCTCAATCA	1572	False	NA	-5	True	AATAAA	-23	NA	110256466	110243961	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_110244220_110244777_110244844_110251357_110251463_110256411
H1_mix_00087035	chr9	-	585	5	FSM	ENSG00000136810.13	ENST00000374517.6	737	5	0	152	0	57	multi-exon	FALSE	canonical	3	7787	junction_4	185.028376202138	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCCTATATTCTCAATCA	0	True	NA	-5	True	AATAAA	-23	NA	110256507	110243961	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_110244220_110244777_110244844_110250819_110250880_110251357_110251463_110256411
H1_mix_00087036	chr9	-	7087	49	FSM	ENSG00000136813.15	ENST00000338205.9	7078	49	0	-9	0	2	multi-exon	TRUE	canonical	3	275	junction_48	71.0122953702385	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTTTGTGTGTGTATA	18	True	NA	4	True	AATAAA	-30	NA	111484357	111360682	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_111362170_111363587_111363660_111366238_111366328_111366521_111366628_111369034_111369174_111370434_111370628_111370721_111370766_111371620_111371830_111372428_111372621_111373169_111373237_111373314_111373407_111373971_111374039_111375112_111375203_111376475_111376542_111378579_111378731_111383210_111383333_111384521_111384570_111385336_111385443_111386376_111386457_111389555_111389724_111389983_111390102_111391755_111391825_111392767_111392883_111393679_111393735_111394159_111394306_111397029_111397154_111408570_111408673_111410040_111410214_111410979_111411143_111412013_111412149_111413894_111413987_111414428_111414652_111416271_111416353_111417882_111418007_111420016_111420121_111421920_111422044_111422133_111422201_111423198_111423249_111425417_111425497_111425742_111425829_111428041_111428162_111430546_111430629_111433232_111433373_111436939_111437109_111440371_111440522_111442305_111442425_111444377_111444495_111451424_111451556_111484115
H1_mix_00087037	chr9	-	7217	50	FSM	ENSG00000136813.15	ENST00000684092.1	7215	50	0	-2	0	2	multi-exon	TRUE	canonical	3	65	junction_49	100.267933436544	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTTTGTGTGTGTATA	-8	True	NA	4	True	AATAAA	-30	NA	111484383	111360682	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_111362170_111363587_111363660_111366238_111366328_111366521_111366628_111369034_111369174_111370434_111370628_111370721_111370766_111371620_111371830_111372428_111372621_111373169_111373237_111373314_111373407_111373971_111374039_111375112_111375203_111376475_111376542_111378579_111378731_111383210_111383333_111384521_111384570_111385336_111385443_111386376_111386457_111389555_111389724_111389983_111390102_111391755_111391825_111392767_111392883_111393679_111393735_111394159_111394306_111397029_111397154_111408570_111408673_111410040_111410214_111410979_111411143_111412013_111412149_111413894_111413987_111414428_111414652_111416271_111416353_111417882_111418007_111420016_111420121_111421920_111422044_111422133_111422201_111423198_111423249_111425417_111425497_111425742_111425829_111428041_111428162_111430546_111430629_111433232_111433373_111436939_111437109_111440371_111440522_111442305_111442425_111444377_111444495_111451424_111451556_111472896_111473001_111484115
H1_mix_00087038	chr9	-	6521	49	NIC	ENSG00000136813.15	novel	7215	50	NA	NA	0	-1	intron_retention	FALSE	canonical	3	67	junction_48	87.2439681733866	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGTTCCTTATTAGCTT	-8	True	NA	-15	True	AATAAA	-16	NA	111484383	111361886	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_111362170_111363587_111363660_111366238_111366328_111366521_111366628_111369034_111369174_111370434_111370628_111370721_111370766_111371620_111371830_111372428_111372621_111373169_111373237_111373314_111373407_111373971_111374039_111375112_111375203_111376475_111376542_111378579_111378731_111383210_111383333_111384521_111384570_111385336_111385443_111386376_111386457_111389555_111389724_111389983_111390102_111391755_111391825_111392767_111392883_111393679_111393735_111394159_111394306_111397029_111397154_111408570_111408673_111410040_111410214_111410979_111411143_111412013_111412149_111413894_111413987_111414428_111414652_111416271_111416353_111417882_111418007_111420016_111420121_111421920_111422044_111422133_111422201_111423198_111423249_111425417_111425497_111425742_111425829_111428041_111428162_111430546_111430629_111433232_111433373_111436939_111437109_111440371_111440522_111442305_111442425_111444377_111444495_111451424_111451556_111483503
H1_mix_00087040	chr9	-	1951	11	FSM	ENSG00000106853.20	ENST00000466771.6	1941	11	0	-10	0	0	multi-exon	FALSE	canonical	3	178	junction_2	394.58073951981	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTGGCTCATGCCTGTA	NA	False	NA	-1	True	AATAAA	-34	NA	111599893	111562566	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_111563232_111564156_111564263_111570090_111570210_111574733_111574843_111578795_111578952_111583471_111583590_111585997_111586166_111592925_111592983_111594221_111594268_111597316_111597433_111599602
H1_mix_00087041	chr9	-	1223	10	FSM	ENSG00000106853.20	ENST00000309195.9	1223	10	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_9	292.361183689619	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTGATGGAGGATGGAAG	5	True	NA	-36	True	AATAAA	-22	NA	111599407	111562966	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_111563232_111570090_111570210_111574733_111574843_111578795_111578952_111583471_111583590_111585997_111586166_111592925_111592983_111594221_111594268_111597316_111597433_111599338
H1_mix_00087042	chr9	-	1061	4	FSM	ENSG00000106853.20	ENST00000374313.5	1061	4	0	0	0	0	multi-exon	FALSE	canonical	3	784	junction_3	215.134583200584	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAACACAGTCTTTCCAT	19	True	NA	NA	False	AATATA	-37	NA	111599816	111592297	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_111592983_111594221_111594268_111597316_111597433_111599602
H1_mix_00087044	chr9	-	3737	1	FSM	ENSG00000259953.2	ENST00000568421.1	2917	1	-141	-679	-141	-160	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTACTCATCAATTAAAAA	5581	False	NA	NA	False	AATAAA	-40	NA	112036451	112032714	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_112032700_112036500
H1_mix_00087045	chr9	-	3017	17	FSM	ENSG00000106868.17	ENST00000374270.8	3015	17	0	-2	0	2	multi-exon	FALSE	canonical	3	20	junction_6	3.04138126514911	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCTTCCCTTGGTTAAT	32	True	NA	1	True	AGTAAA	-19	NA	112175297	112040780	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_112041493_112041866_112041961_112052398_112052439_112058427_112058687_112062936_112063034_112078537_112078725_112080073_112080166_112098469_112098663_112102175_112102286_112111653_112111841_112112770_112112869_112124256_112124437_112142319_112142500_112143470_112143624_112149243_112149400_112157499_112157614_112175132
H1_mix_00087046	chr9	-	2982	16	FSM	ENSG00000106868.17	ENST00000374263.7	2973	16	0	-9	0	7	multi-exon	FALSE	canonical	1	2	junction_2	6.18384993349612	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCTTGGTTAATTTTTC	32	True	NA	6	True	AGTAAA	-24	NA	112175297	112040775	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_112041493_112041866_112041961_112058427_112058687_112062936_112063034_112078537_112078725_112080073_112080166_112098469_112098663_112102175_112102286_112111653_112111841_112112770_112112869_112124256_112124437_112142319_112142500_112143470_112143624_112149243_112149400_112157499_112157614_112175132
H1_mix_00087047	chr9	-	7857	13	FSM	ENSG00000119314.16	ENST00000343327.6	2755	13	-103	-4999	-17	54	multi-exon	FALSE	canonical	3	46	junction_11	70.6768860535198	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATAAACTCGATTGACT	NA	False	NA	NA	False	GATAAA	-24	NA	112333681	112217661	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_112223984_112224132_112224211_112227410_112227628_112228379_112228473_112231379_112231414_112232098_112232239_112234819_112234898_112250928_112251104_112252677_112252789_112262434_112262600_112268048_112268196_112297831_112297917_112333469
H1_mix_00087048	chr9	-	7178	14	NIC	ENSG00000119314.16	novel	7192	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_12	63.6376577137306	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCTGTGTTCTTGTCTG	13	True	NA	-2	True	AATAAA	-28	NA	112333614	112218434	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_112223984_112224132_112224211_112227410_112227628_112228379_112228473_112231379_112231414_112232098_112232239_112234819_112234898_112250928_112251104_112252677_112252789_112262434_112262600_112268048_112268196_112275843_112276014_112297840_112297917_112333469
H1_mix_00087049	chr9	-	7192	14	FSM	ENSG00000119314.16	ENST00000374257.6	7192	14	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_12	52.1279717981333	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCTGTGTTCTTGTCTG	8	True	NA	-2	True	AATAAA	-28	NA	112333619	112218434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_112223984_112224132_112224211_112227410_112227628_112228379_112228473_112231379_112231414_112232098_112232239_112234819_112234898_112250928_112251104_112252677_112252789_112262434_112262600_112268048_112268196_112275843_112276014_112297831_112297917_112333469
H1_mix_00087050	chr9	-	7821	13	NIC	ENSG00000119314.16	novel	7990	15	NA	NA	0	44	combination_of_known_splicesites	FALSE	canonical	3	58	junction_11	67.6674876797483	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTAGGCTTTTATAAAC	NA	False	NA	NA	False	GATAAA	-14	NA	112333664	112217671	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_112223984_112224132_112224211_112227410_112227628_112228379_112228473_112231379_112231414_112232098_112232239_112234819_112234898_112250928_112251104_112252677_112252789_112262434_112262600_112268048_112268196_112297840_112297917_112333469
H1_mix_00087052	chr9	-	4092	5	FSM	ENSG00000148153.14	ENST00000374242.9	4114	5	31	-9	0	9	multi-exon	FALSE	canonical	3	153	junction_3	19.1898410623955	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTGAACAATCTATAAACT	-2	True	NA	-5	True	AATAAA	-40	NA	112718086	112683916	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_112687634_112689526_112689618_112694130_112694234_112716460_112716542_112717986
H1_mix_00087053	chr9	-	857	4	FSM	ENSG00000148153.14	ENST00000374236.5	874	4	17	0	-15	0	multi-exon	FALSE	canonical	3	29	junction_3	78.7922726047562	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTGCTGTTTATAGGAT	-48	True	NA	NA	False	AATGAA	-27	NA	112718132	112687116	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_112687634_112689526_112689618_112694130_112694234_112717986
H1_mix_00087055	chr9	-	2636	5	FSM	ENSG00000228623.7	ENST00000638622.1	2414	5	15	-237	15	237	multi-exon	FALSE	canonical	3	49	junction_4	6.97764286847643	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAAGTTACTTTCAGAGA	-13	True	NA	NA	False	TTTAAA	-7	NA	113012212	112996882	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_112999139_112999664_112999815_113001993_113002074_113011140_113011228_113012149
H1_mix_00087056	chr9	-	6258	4	FSM	ENSG00000136866.14	ENST00000374227.8	6277	4	15	4	15	-4	multi-exon	FALSE	canonical	3	13	junction_3	6.18241233033047	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATATGCACATTAGGATT	-8	True	NA	NA	False	AATAAA	-15	NA	113056709	113038380	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_113044269_113049361_113049497_113049790_113049873_113056556
H1_mix_00087060	chr9	-	828	4	NNC	ENSG00000176386.9	novel	871	4	NA	NA	-11	-3	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_3	510.248523325208	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATGAAGTATAACAGTACT	18	True	NA	-59	True	AATAAA	-30	NA	113275560	113266994	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_113267440_113272426_113272549_113273328_113273411_113275381
H1_mix_00087061	chr9	-	1836	2	FSM	ENSG00000119431.10	ENST00000238379.9	1834	2	0	-2	0	2	multi-exon	FALSE	canonical	3	90	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGCCTCTGCCCTCCCT	810	False	NA	-4	True	AATAAA	-42	NA	113376175	113373416	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_113374530_113375452
H1_mix_00087063	chr9	-	1443	3	FSM	ENSG00000119431.10	ENST00000485934.1	913	3	-61	-469	0	0	multi-exon	FALSE	canonical	3	40	junction_2	25	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTAGCCTCTGCCCTCC	-1	True	NA	-6	True	AATAAA	-40	NA	113376986	113373418	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_113374530_113375452_113375527_113376728
H1_mix_00087064	chr9	-	3430	12	FSM	ENSG00000148218.16	ENST00000482847.5	3247	12	-81	-102	-34	95	multi-exon	FALSE	canonical	3	13	junction_10	35.4230629453433	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACGGGGAGACCAAGGAGA	9350	False	NA	85	True	NA	NA	NA	113401324	113386216	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_113388362_113388976_113389107_113389437_113389525_113389598_113389687_113389772_113389829_113390404_113390494_113390592_113390677_113390797_113390934_113391526_113391624_113392118_113392336_113393446_113393635_113401211
H1_mix_00087065	chr9	-	3133	12	FSM	ENSG00000148218.16	ENST00000409155.8	3129	12	0	-4	0	4	multi-exon	FALSE	canonical	3	77	junction_7	16.856712619327	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGAATGTCTTGTTTCA	-2	True	NA	-6	True	AATAAA	-25	NA	113401284	113386307	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_113388362_113388976_113389107_113389437_113389525_113389598_113389687_113389772_113389829_113390404_113390494_113390592_113390677_113390797_113390934_113391526_113391624_113392118_113392170_113393446_113393635_113401211
H1_mix_00087068	chr9	-	2204	5	FSM	ENSG00000148229.13	ENST00000374171.5	2194	5	0	-10	0	10	multi-exon	FALSE	canonical	3	17	junction_4	173.691357010071	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCATGCTGCTTGTTCA	-1	True	NA	-6	True	AATAAA	-26	NA	113410675	113407224	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_113408984_113409609_113409729_113410054_113410141_113410227_113410409_113410616
H1_mix_00087070	chr9	-	2075	4	FSM	ENSG00000148229.13	ENST00000374169.7	2109	4	44	-10	5	10	multi-exon	FALSE	canonical	3	411	junction_2	4.96655480858378	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCATGCTGCTTGTTCA	24	True	NA	-6	True	AATAAA	-26	NA	113410338	113407224	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_113408984_113409609_113409729_113410054_113410141_113410227
H1_mix_00087073	chr9	-	7444	22	FSM	ENSG00000106948.17	ENST00000374088.8	7454	22	14	-4	14	4	multi-exon	FALSE	canonical	0	0	junction_1	2.15814651307136	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGGTTTAATTGACTCA	9986	False	NA	NA	False	TATAAA	-32	NA	114387968	114334151	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_114337307_114341532_114341726_114342008_114342126_114343707_114343804_114345862_114346010_114346668_114346785_114347723_114347901_114350858_114351022_114355924_114356137_114356862_114356970_114357920_114358168_114359593_114359795_114359895_114360063_114361703_114361912_114362405_114362534_114364559_114364620_114367542_114367698_114368438_114368596_114374092_114374168_114376465_114377533_114381059_114381447_114387859
H1_mix_00087075	chr9	-	4072	12	FSM	ENSG00000095397.16	ENST00000362057.4	4070	12	0	-2	0	2	multi-exon	FALSE	canonical	3	24	junction_8	9.12357766566864	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCAGCGTGCTGTGTGGTT	22	True	NA	-5	True	AATAAA	-21	NA	114505473	114402077	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_114402937_114403216_114403340_114403895_114404078_114406354_114406893_114407946_114408019_114423313_114423524_114424333_114424547_114424987_114425025_114426210_114426414_114466266_114466393_114478552_114478772_114504183
H1_mix_00087076	chr9	-	3969	13	NIC	ENSG00000095397.16	novel	4070	12	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_8	9.1469484893415	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTCAGCGTGCTGTGTGG	-20	True	NA	-7	True	AATAAA	-19	NA	114505515	114402079	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_114402937_114403216_114403340_114403895_114404078_114406354_114406893_114407946_114408019_114423313_114423524_114424333_114424547_114424987_114425025_114426210_114426414_114466266_114466393_114478552_114478772_114504183_114505052_114505194
H1_mix_00087077	chr9	-	1719	2	FSM	ENSG00000095397.16	ENST00000374057.3	1718	2	0	-1	0	1	multi-exon	FALSE	canonical	3	57	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTATTGATTGGCTTA	-3	True	NA	NA	False	AATAAA	-19	NA	114505450	114478319	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_114478772_114504183
H1_mix_00087078	chr9	-	1291	3	NIC	ENSG00000095397.16	novel	591	2	NA	NA	6	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	26.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGTTTGTCCTTTCTGCC	28	True	NA	NA	False	AATAAA	-16	NA	114505467	114503549	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_114503700_114504183_114505052_114505194
H1_mix_00087080	chr9	-	8725	28	FSM	ENSG00000041982.16	ENST00000350763.9	8500	28	-225	0	-125	0	multi-exon	FALSE	canonical	3	37	junction_18	30.5442178741221	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGTCTTCTGGCTCCAA	681	False	NA	NA	False	AATAAA	-21	NA	115118382	115019574	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_115021268_115023972_115024137_115026533_115026696_115029359_115029457_115030253_115030406_115031552_115031686_115035203_115035335_115036097_115036242_115038260_115038381_115040940_115041085_115042218_115042342_115046409_115046683_115048259_115048533_115057152_115057426_115059729_115060003_115062916_115063190_115063795_115064069_115064646_115064920_115073602_115073867_115076031_115076122_115076389_115076576_115077942_115078213_115081771_115081929_115082691_115082808_115084208_115084473_115085863_115087274_115090561_115091155_115117981
H1_mix_00087083	chr9	-	4622	22	FSM	ENSG00000148219.18	ENST00000361209.6	4622	22	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_19	17.7856983489442	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTGGGTGGTATTT	3	True	NA	-6	True	ATTAAA	-18	NA	117415070	116425227	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_116426089_116440608_116440793_116442452_116442554_116487358_116487501_116618323_116618473_116620309_116620444_116651527_116651794_116725770_116725951_116728991_116729097_116733398_116733524_116805631_116805821_116820616_116820784_116863582_116863734_116975207_116975346_116976113_116976189_116976700_116976786_117008091_117008260_117039818_117039966_117096043_117096152_117214357_117214743_117291325_117291514_117414496
H1_mix_00087084	chr9	-	1997	8	NIC	ENSG00000148219.18	novel	1757	9	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	33	junction_7	11.246768243294	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGCTTGGGTGGTAT	10	True	NA	-8	True	ATTAAA	-16	NA	116687227	116425229	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_116426089_116440608_116440793_116442452_116442554_116487358_116487501_116618323_116618473_116620309_116620444_116651527_116651794_116687065
H1_mix_00087085	chr9	-	4364	23	NIC	ENSG00000148219.18	novel	6878	23	NA	NA	353	-15	intron_retention	FALSE	canonical	2	7	junction_14	17.7140393496979	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTATTGTCTCTCTTTCT	387	False	NA	-21	True	ATTAAA	-3	NA	117414686	116425242	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_116426089_116440608_116440793_116442452_116442554_116487358_116487501_116618323_116618473_116620309_116620444_116651527_116651794_116725770_116725951_116728991_116729097_116733398_116733524_116805631_116805821_116820616_116820784_116863582_116863734_116975207_116975334_116976113_116976189_116976700_116976786_117008091_117008260_117039818_117039966_117096043_117096152_117141325_117141479_117214357_117214743_117291325_117291514_117414496
H1_mix_00087086	chr9	-	276	1	FSM	ENSG00000234782.3	ENST00000413759.1	514	1	214	24	214	-24	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGATGGTTTAGAAACGGAA	NA	False	NA	NA	False	NA	NA	NA	118083168	118082892	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_118082900_118083200
H1_mix_00087087	chr9	-	3186	9	NNC	ENSG00000078725.13	novel	3171	8	NA	NA	0	-4417	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	19.1045642452268	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGGGAATCTGGAAACA	16	True	NA	NA	False	NA	NA	NA	119369425	119157874	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_119157902_119166630_119168225_119208718_119208942_119213918_119214156_119238654_119238761_119242046_119242217_119248959_119249151_119313137_119313406_119369055
H1_mix_00087088	chr9	-	3189	8	FSM	ENSG00000078725.13	ENST00000265922.8	3171	8	0	-18	0	18	multi-exon	FALSE	canonical	3	40	junction_6	7.88695642390986	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATTCCTTGTGTGTGTTT	6	True	NA	-2	True	GATAAA	-45	NA	119369435	119166610	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_119168225_119208718_119208942_119213918_119214156_119238654_119238761_119242046_119242217_119248959_119249151_119313137_119313406_119369055
H1_mix_00087089	chr9	-	6230	38	FSM	ENSG00000136861.19	ENST00000349780.9	6232	38	8	-6	0	6	multi-exon	FALSE	canonical	3	48	junction_33	38.3698125195192	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGATTCTGTTGTTTTGTGTG	-2	True	NA	-1	True	ATTAAA	-24	NA	120580159	120388868	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_120389293_120389740_120389788_120394511_120394639_120400741_120400886_120402805_120403072_120404035_120404114_120407011_120407249_120408346_120408469_120409126_120409317_120411357_120411475_120415039_120415160_120419787_120419961_120422692_120422742_120437294_120437528_120439398_120439973_120443619_120443743_120447894_120448127_120453455_120453874_120458449_120458623_120460571_120460668_120467859_120467998_120470110_120470221_120471747_120471879_120477349_120477451_120487293_120487438_120491306_120491478_120518426_120518646_120524985_120525079_120527805_120527926_120528743_120528798_120529977_120530141_120536371_120536527_120539040_120539165_120545713_120545791_120550791_120550903_120568320_120568389_120571973_120572042_120579919
H1_mix_00087090	chr9	-	5992	37	FSM	ENSG00000136861.19	ENST00000360190.8	5985	37	0	-7	0	6	multi-exon	FALSE	canonical	3	23	junction_6	40.8720054968353	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGATTCTGTTGTTTTGTGTG	-1	True	NA	-1	True	ATTAAA	-24	NA	120580158	120388868	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_120389293_120389740_120389788_120394511_120394639_120400741_120400886_120402805_120403072_120404035_120404114_120408346_120408469_120409126_120409317_120411357_120411475_120415039_120415160_120419787_120419961_120422692_120422742_120437294_120437528_120439398_120439973_120443619_120443743_120447894_120448127_120453455_120453874_120458449_120458623_120460571_120460668_120467859_120467998_120470110_120470221_120471747_120471879_120477349_120477451_120487293_120487438_120491306_120491478_120518426_120518646_120524985_120525079_120527805_120527926_120528743_120528798_120529977_120530141_120536371_120536527_120539040_120539165_120545713_120545791_120550791_120550903_120568320_120568389_120571973_120572042_120579919
H1_mix_00087093	chr9	-	6195	6	FSM	ENSG00000106780.9	ENST00000373930.4	6300	6	0	105	0	-105	multi-exon	FALSE	canonical	2	6	junction_1	1.93907194296653	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGTTTACTTTTTTGT	16	True	NA	2	True	AATAAA	-27	NA	120714470	120600915	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_120605642_120607740_120608011_120612395_120612540_120622615_120622756_120659373_120659576_120713757
H1_mix_00087094	chr9	-	9106	8	NNC	ENSG00000119402.18	novel	9142	8	NA	NA	4	-6	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_7	63.7178089993172	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCAAGACATGCGTTGAAG	13	True	NA	-9	True	AATAAA	-44	NA	120793392	120756979	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_120764848_120771347_120771518_120772753_120772841_120776092_120776227_120778350_120778546_120787768_120788279_120793148_120793258_120793359
H1_mix_00087095	chr9	-	9143	8	FSM	ENSG00000119402.18	ENST00000608872.6	9142	8	0	-1	0	1	multi-exon	FALSE	canonical	3	101	junction_7	48.4220391717555	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCGTTGAAGTGTTCTT	-11	True	NA	-2	True	NA	NA	NA	120793416	120756972	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_120764848_120771347_120771518_120772753_120772841_120776092_120776227_120778350_120778546_120787768_120788279_120793148_120793258_120793353
H1_mix_00087096	chr9	-	569	4	FSM	ENSG00000095261.14	ENST00000373920.6	569	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	112.697234512062	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAAGGCACTAAACTGGG	NA	False	NA	NA	False	CATAAA	-20	NA	120824518	120815495	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_120815789_120820838_120820980_120821354_120821465_120824493
H1_mix_00087097	chr9	-	3386	10	FSM	ENSG00000095261.14	ENST00000210313.8	3381	10	0	-5	0	5	multi-exon	FALSE	canonical	3	211	junction_6	34.24097610239	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGACTGCCTATTATGTTC	11	True	NA	NA	False	AATAAA	-40	NA	120842922	120816047	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_120818164_120820838_120820980_120821354_120821465_120824493_120824686_120826764_120826908_120829098_120829209_120831330_120831460_120831831_120831946_120833311_120833457_120842736
H1_mix_00087098	chr9	-	569	3	FSM	ENSG00000095261.14	ENST00000471789.1	567	3	0	-2	0	2	multi-exon	FALSE	canonical	3	285	junction_1	23	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTAGTAAACCCCTTTCAT	51	False	NA	NA	False	AATAAA	-16	NA	120842882	120831667	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_120831946_120833311_120833457_120842736
H1_mix_00087099	chr9	-	4429	15	FSM	ENSG00000119403.15	ENST00000373896.8	4149	15	-280	0	-280	0	multi-exon	FALSE	canonical	3	13	junction_5	31.6711418248505	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCTTCCCTATAGTGAA	990	False	NA	22	True	TTTAAA	-20	NA	120877468	120855650	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_120858287_120860089_120860186_120861088_120861175_120861917_120862006_120862587_120862750_120864048_120864117_120865709_120865831_120866027_120866097_120866869_120866966_120869181_120869331_120869844_120869946_120870442_120870539_120873978_120874061_120874555_120874757_120877090
H1_mix_00087100	chr9	-	852	5	FSM	ENSG00000119403.15	ENST00000312189.10	836	5	0	-16	0	16	multi-exon	FALSE	canonical	3	79	junction_4	8.4372685153431	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTAATTGTTGCCTTTAT	-6	True	NA	-19	True	AATAAA	-43	NA	120877188	120869570	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_120869946_120870442_120870539_120873978_120874061_120874555_120874757_120877090
H1_mix_00087101	chr9	-	4365	8	FSM	ENSG00000056558.11	ENST00000373887.8	4351	8	0	-14	0	14	multi-exon	FALSE	canonical	2	7	junction_5	3.53986048381825	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCATCTTTTACAGGTGAT	-8	True	NA	12	True	NA	NA	NA	120926796	120902378	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_120905239_120909229_120909379_120911335_120911514_120913327_120913739_120914234_120914301_120923704_120923793_120925935_120926302_120926549
H1_mix_00087102	chr9	-	4298	9	FSM	ENSG00000056558.11	ENST00000540010.1	4303	9	19	-14	19	14	multi-exon	FALSE	canonical	2	2	junction_8	4.54835134966506	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCATCTTTTACAGGTGAT	6372	False	120929169	12	True	NA	NA	NA	120929154	120902378	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_120905239_120909229_120909379_120911335_120911514_120913327_120913739_120914234_120914301_120923704_120923793_120925935_120926302_120926549_120926689_120929113
H1_mix_00087103	chr9	-	5468	41	FSM	ENSG00000106804.8	ENST00000223642.3	5464	41	0	-4	0	4	multi-exon	FALSE	canonical	3	44	junction_21	10.5952524745756	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAAAAAGCCTGTTATTTT	-2	True	NA	-8	True	ATTAAA	-24	NA	121050275	120952330	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_120952869_120953729_120953869_120957284_120957369_120960247_120960338_120961481_120961566_120962670_120962777_120962892_120962968_120963635_120963739_120969060_120969119_120970169_120970252_120971929_120971993_120974778_120974932_120976699_120976906_120980082_120980255_120981843_120981940_120982654_120982815_120989045_120989122_120989567_120989781_120991190_120991281_120996239_120996301_120997546_120997775_121005918_121006059_121006903_121006978_121008407_121008499_121013872_121014071_121015198_121015262_121016253_121016384_121017361_121017512_121017642_121017853_121019975_121020180_121021508_121021695_121023403_121023520_121025453_121025581_121027159_121027275_121030396_121030488_121032112_121032196_121034802_121034895_121037880_121037952_121043003_121043167_121046190_121046384_121050181
H1_mix_00087104	chr9	-	4145	8	FSM	ENSG00000119396.11	ENST00000373840.9	4149	8	0	4	0	-4	multi-exon	FALSE	canonical	3	413	junction_2	13.9532747966569	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATGACTGCACTGTGCTG	15	True	NA	NA	False	AATAAA	-15	NA	121201869	121178136	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_121181574_121182929_121182961_121183310_121183399_121186952_121187020_121190553_121190732_121192170_121192225_121193360_121193420_121201638
H1_mix_00087105	chr9	-	3089	7	FSM	ENSG00000148175.13	ENST00000286713.7	3145	7	0	56	0	-55	multi-exon	FALSE	canonical	3	533	junction_3	26.1772802254168	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGTCTGTGGATTTCCG	-4	True	NA	15	True	NA	NA	NA	121370250	121339042	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_121341409_121348014_121348150_121349119_121349324_121353219_121353303_121354600_121354674_121356052_121356157_121370126
H1_mix_00087106	chr9	-	344	2	Intergenic	novelGene_1604	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	8	junction_1	0	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTTTCTTCAGGCCATC	NA	False	NA	NA	False	NA	NA	NA	121796745	121790083	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_-_121790244_121796561
H1_mix_00087108	chr9	-	813	4	FSM	ENSG00000119421.7	ENST00000373768.4	804	4	0	-9	0	9	multi-exon	FALSE	canonical	3	1203	junction_3	48.6415460280612	195	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTATGTTTTATGTGAC	-11	True	NA	-2	True	ATTAAA	-24	NA	122159779	122144048	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_122144379_122148111_122148278_122152244_122152409_122159626
H1_mix_00087109	chr9	-	4974	6	FSM	ENSG00000119446.14	ENST00000417201.4	4977	6	0	3	0	-3	multi-exon	FALSE	canonical	3	250	junction_3	26.8626134246093	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATTGTTTCTTAGTCAA	-15	True	NA	-1	True	AATAAA	-29	NA	122264840	122237624	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_122242044_122245255_122245342_122247517_122247605_122251846_122251974_122261379_122261509_122264714
H1_mix_00087111	chr9	-	1700	4	FSM	ENSG00000136940.14	ENST00000259467.9	3017	4	0	1317	0	1130	multi-exon	FALSE	canonical	3	330	junction_1	43.5303214884624	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTAAAGGAAGTTCTTT	-9	True	NA	NA	False	TTTAAA	-28	NA	122828588	122819413	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_122820637_122823015_122823198_122826615_122826793_122828470
H1_mix_00087114	chr9	-	8951	21	FSM	ENSG00000056586.16	ENST00000357244.7	8964	21	13	0	-5	0	multi-exon	FALSE	canonical	3	41	junction_3	34.3916777723914	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTTGTTTAATGTCAAT	23	True	NA	-1	True	AATAAA	-21	NA	122905346	122844555	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_122849823_122851080_122851230_122851322_122851437_122853951_122854087_122854184_122854267_122854530_122854616_122855183_122855398_122855731_122855879_122857922_122858094_122858668_122859103_122859916_122860132_122865348_122865658_122877470_122877584_122879754_122879874_122879992_122880126_122880593_122880795_122883203_122883380_122890311_122890546_122892908_122893027_122897278_122897577_122905109
H1_mix_00087115	chr9	-	3623	18	FSM	ENSG00000056586.16	ENST00000423239.6	3623	18	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	24.1137730030559	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGAATCTTGCTCTATCG	28	True	NA	25	True	NA	NA	NA	122905341	122853744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_122854087_122854184_122854267_122854530_122854616_122855183_122855398_122855731_122855879_122857922_122858094_122858668_122859103_122859916_122860132_122865348_122865658_122877470_122877584_122879754_122879874_122879992_122880126_122880593_122880795_122883203_122883380_122890311_122890546_122892908_122893027_122897278_122897577_122905109
H1_mix_00087116	chr9	-	3081	10	FSM	ENSG00000056586.16	ENST00000335387.9	3081	10	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	44.7174945741334	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACAGTATTATAATTGTTT	8100	False	NA	NA	False	AATAAA	-40	NA	122905215	122873785	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_122875369_122877470_122877584_122879754_122879874_122879992_122880126_122880593_122880795_122883203_122883380_122890311_122890546_122892908_122893027_122897278_122897577_122905109
H1_mix_00087117	chr9	-	1005	4	ISM	ENSG00000056586.16	ENST00000335387.9	3081	10	-110	16387	16	-2	5prime_fragment	FALSE	canonical	3	143	junction_2	6.18241233033047	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTGTTGTTATTGCTGT	7990	False	NA	-12	True	ATTAAA	-16	NA	122905325	122890172	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_122890546_122892908_122893027_122897278_122897577_122905109
H1_mix_00087118	chr9	-	4105	2	FSM	ENSG00000186130.5	ENST00000373659.4	4099	2	0	-6	0	6	multi-exon	FALSE	canonical	3	31	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTTGTCTTCATCTTT	-8	True	NA	2	True	AATAAA	-24	NA	122913323	122908049	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_122912082_122913250
H1_mix_00087119	chr9	-	4569	2	FSM	ENSG00000171448.9	ENST00000373656.4	4455	2	-114	0	-114	0	multi-exon	FALSE	canonical	3	13	junction_1	0	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGTCATTGGTTAT	9628	False	NA	NA	False	AATAAA	-16	NA	122931626	122915565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_122919945_122931436
H1_mix_00087120	chr9	-	5984	1	FSM	ENSG00000236901.6	ENST00000449175.1	5984	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGGATTGTTCTGTGCA	8050	False	NA	-2	True	AATAAA	-28	NA	123115477	123109493	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_123109500_123115500
H1_mix_00087121	chr9	-	3566	19	NNC	ENSG00000165209.19	novel	6451	19	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	139.989285304269	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGAATTTCATGTTTCA	-4	True	NA	NA	False	NA	NA	NA	123268586	123121288	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_123121632_123124707_123125674_123128213_123128259_123132844_123132969_123136040_123136182_123136380_123136516_123139528_123139688_123146854_123147055_123147777_123147871_123158011_123158124_123158331_123158430_123159095_123159208_123160366_123160463_123160976_123161069_123169901_123170047_123173676_123173843_123179006_123179228_123184131_123184299_123268435
H1_mix_00087122	chr9	-	3706	20	NNC	ENSG00000165209.19	novel	6451	19	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	194.86920110722	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGAATTTCATGTTTCA	-4	True	NA	NA	False	NA	NA	NA	123268586	123121288	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_123121632_123124707_123125674_123128213_123128259_123132844_123132969_123136040_123136182_123136380_123136516_123139528_123139688_123146854_123147055_123147777_123147871_123158011_123158124_123158331_123158430_123159095_123159208_123160366_123160463_123160976_123161069_123169901_123170047_123173676_123173843_123179006_123179228_123184131_123184299_123236829_123236970_123268435
H1_mix_00087124	chr9	-	3213	18	NIC	ENSG00000165209.19	novel	6451	19	NA	NA	2	333	combination_of_known_junctions	FALSE	canonical	3	486	junction_17	54.2661007313158	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTTCTTGTGGCCTTC	8	True	NA	-1	True	AATAAA	-20	NA	123268574	123124705	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_123125674_123128213_123128259_123132844_123132969_123136040_123136182_123136380_123136516_123139528_123139688_123146854_123147055_123147777_123147871_123158011_123158124_123158331_123158430_123159095_123159208_123160366_123160463_123160976_123161069_123169901_123170047_123173676_123173843_123179006_123179228_123184131_123184299_123268435
H1_mix_00087125	chr9	-	3066	17	NIC	ENSG00000165209.19	novel	6451	19	NA	NA	0	333	combination_of_known_splicesites	FALSE	canonical	3	70	junction_5	132.867415117477	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTTCTTGTGGCCTTC	-4	True	NA	-1	True	AATAAA	-20	NA	123268586	123124705	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_123125674_123128213_123128259_123132844_123132969_123136040_123136182_123136380_123136516_123146854_123147055_123147777_123147871_123158011_123158124_123158331_123158430_123159095_123159208_123160366_123160463_123160976_123161069_123169901_123170047_123173676_123173843_123179006_123179228_123184131_123184299_123268435
H1_mix_00087126	chr9	-	6451	19	FSM	ENSG00000165209.19	ENST00000348403.10	6451	19	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_18	166.4868659781	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAACAAAATATTATGGT	-4	True	NA	NA	False	AATAGA	-20	NA	123268586	123121616	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_123125674_123128213_123128259_123132844_123132969_123136040_123136182_123136380_123136516_123139528_123139688_123146854_123147055_123147777_123147871_123158011_123158124_123158331_123158430_123159095_123159208_123160366_123160463_123160976_123161069_123169901_123170047_123173676_123173843_123179006_123179228_123184131_123184299_123236829_123236967_123268435
H1_mix_00087127	chr9	-	6633	22	FSM	ENSG00000119522.17	ENST00000373624.6	5010	22	0	-1623	0	1623	multi-exon	FALSE	canonical	3	73	junction_2	12.3543670613888	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCTGGGGGGGTTCAGG	22	True	NA	NA	False	NA	NA	NA	123930107	123378030	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_123382626_123383654_123383914_123403401_123403491_123440359_123440492_123450692_123450750_123452275_123452348_123454738_123454780_123457347_123457436_123457792_123457898_123557569_123557696_123583168_123583271_123609435_123609482_123630375_123630477_123652012_123652124_123667025_123667080_123671290_123671372_123676719_123676790_123757702_123757823_123769513_123769564_123792586_123792631_123878950_123879022_123929888
H1_mix_00087128	chr9	-	4764	19	NIC	ENSG00000119522.17	novel	5010	22	NA	NA	5	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	26.8463851395626	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGAGGCTGGCATCCCCGT	27	False	NA	-13	True	AATAAA	-12	NA	123930102	123379660	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_123382626_123383654_123383914_123403401_123403491_123440359_123440492_123450692_123450750_123452275_123452348_123557569_123557696_123583168_123583271_123609435_123609482_123630375_123630477_123652012_123652124_123667025_123667080_123671290_123671372_123676719_123676790_123757702_123757823_123769513_123769564_123792586_123792631_123878950_123879022_123929888
H1_mix_00087129	chr9	-	3612	21	FSM	ENSG00000119522.17	ENST00000373620.7	3612	21	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	17.3097515868946	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGGCTACTTCCATTAC	3	True	NA	NA	False	ACTAAA	-13	NA	123930126	123400098	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_123401913_123403401_123403491_123440359_123440492_123450692_123450750_123452275_123452348_123454738_123454780_123457347_123457436_123457792_123457898_123557569_123557696_123583168_123583271_123609435_123609482_123630375_123630477_123652012_123652124_123667025_123667080_123671290_123671372_123676719_123676790_123757702_123757823_123769513_123769564_123792586_123792631_123878950_123879022_123929888
H1_mix_00087130	chr9	-	1329	13	NIC	ENSG00000119522.17	novel	603	8	NA	NA	5	214	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	30.3918848817685	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTCTGTTTTTCCCAGG	27	False	NA	NA	False	AGTAAA	-28	NA	123930102	123569330	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_123569596_123583168_123583271_123609435_123609482_123630375_123630477_123652012_123652124_123667025_123667080_123671290_123671372_123676719_123676790_123757702_123757823_123769513_123769564_123792586_123792631_123878950_123879022_123929888
H1_mix_00087131	chr9	-	984	8	FSM	ENSG00000136930.13	ENST00000259457.8	984	8	0	0	0	0	multi-exon	FALSE	canonical	3	1951	junction_2	126.403468048523	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGGCACTGTGTGGTG	-3	True	NA	-4	True	AATAAA	-27	NA	124415442	124353464	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_124353710_124356763_124356916_124384597_124384657_124405316_124405433_124412351_124412493_124413907_124414006_124414841_124414936_124415363
H1_mix_00087132	chr9	-	462	4	FSM	ENSG00000136930.13	ENST00000466951.1	462	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1025.80580791666	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAGAGTTGTGACAGCCA	164	False	NA	NA	False	NA	NA	NA	124415307	124412399	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_124412493_124413907_124414006_124414841_124414936_124415130
H1_mix_00087135	chr9	-	8900	9	Fusion	ENSG00000231149.2_ENSG00000148200.17	novel	7065	10	NA	NA	-19	-247	multi-exon	FALSE	canonical	2	4	junction_8	16.7961119012705	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAAAGCTCTGTGCTGA	2816	False	NA	NA	False	AATAAA	-17	NA	124595827	124515184	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr9_-_124522794_124524720_124524874_124526778_124526901_124535877_124536133_124538091_124538320_124540032_124540188_124543801_124543858_124554327_124554571_124595748
H1_mix_00087136	chr9	-	7986	10	FSM	ENSG00000148200.17	ENST00000487099.7	7065	10	0	-921	0	921	multi-exon	FALSE	canonical	3	40	junction_4	11.4998658070539	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGGCCTGCTCATATGAT	8	True	NA	NA	False	NA	NA	NA	124771311	124516353	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_124522794_124524720_124524874_124526778_124526901_124535877_124536133_124538091_124538320_124540032_124540188_124543801_124543858_124554327_124554571_124733307_124733350_124771019
H1_mix_00087137	chr9	-	1846	10	FSM	ENSG00000148200.17	ENST00000344523.8	1846	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	15.6473482153635	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGCCAATGCATTTTCTT	-20	True	NA	-60	True	NA	NA	NA	124771287	124522466	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_124522794_124524720_124524874_124526778_124526901_124535877_124536133_124538091_124538317_124540032_124540188_124543801_124543858_124554327_124554571_124733307_124733350_124771019
H1_mix_00087140	chr9	-	493	5	FSM	ENSG00000136942.15	ENST00000373570.8	493	5	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	12637.8109160566	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTTCCTGGCACTTCC	7121	False	NA	-16	True	AATAAA	-20	NA	124861915	124857879	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_124858068_124858457_124858538_124860182_124860265_124861418_124861556_124861909
H1_mix_00087141	chr9	-	785	3	FSM	ENSG00000136942.15	ENST00000487431.1	785	3	0	0	0	0	multi-exon	FALSE	canonical	3	25379	junction_1	1546.5	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTGTTTCCTGGCACT	7100	False	NA	-19	True	AATAAA	-17	NA	124861936	124857882	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_124858068_124860182_124860265_124861418
H1_mix_00087142	chr9	-	452	4	FSM	ENSG00000136942.15	ENST00000348462.6	452	4	0	0	0	0	multi-exon	FALSE	canonical	3	21296	junction_3	2938.86814947524	2778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTGTTTCCTGGCACT	-2	True	NA	-19	True	AATAAA	-17	NA	124861957	124857882	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_124858068_124860182_124860265_124861418_124861556_124861909
H1_mix_00087144	chr9	-	4796	23	FSM	ENSG00000136935.14	ENST00000373555.9	4877	23	0	81	0	22	multi-exon	FALSE	canonical	3	39	junction_22	9.21281895284235	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTAGTTTGGTGTGTCA	3	True	NA	-9	True	ATTAAA	-32	NA	124941083	124878355	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_124880611_124881170_124881258_124881783_124881955_124882509_124882570_124888252_124888397_124889142_124889304_124889433_124889537_124890388_124890479_124898548_124898645_124899328_124899479_124900451_124900548_124908376_124908473_124911900_124912027_124921128_124921241_124921722_124921893_124923094_124923224_124926708_124926742_124928187_124928286_124929215_124929291_124931315_124931407_124938576_124938867_124940105_124940156_124940970
H1_mix_00087145	chr9	-	4929	23	NNC	ENSG00000136935.14	novel	4877	23	NA	NA	-2	22	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_22	10.4747827843906	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTAGTTTGGTGTGTCA	1	True	NA	-9	True	ATTAAA	-32	NA	124941085	124878355	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_124880611_124881170_124881258_124881783_124881955_124882509_124882570_124888252_124888397_124889142_124889304_124889433_124889537_124890388_124890479_124898548_124898645_124899328_124899479_124900451_124900548_124908376_124908473_124911900_124912027_124921128_124921241_124921722_124921893_124923094_124923224_124926708_124926742_124928187_124928286_124929215_124929291_124931315_124931407_124938576_124938867_124940105_124940156_124940839
H1_mix_00087146	chr9	-	12112	18	FSM	ENSG00000173611.18	ENST00000336505.11	12111	18	0	-1	0	1	multi-exon	FALSE	canonical	3	18	junction_1	10.0286786000783	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGTACTTTTTCGGTA	6115	False	125143547	-1	True	AATAAA	-17	NA	125143528	124942606	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_124952954_124971369_124971471_124971670_124971845_124976113_124976187_124994933_124995016_124999890_124999991_125001964_125002044_125003113_125003216_125003468_125003571_125018798_125018952_125019106_125019206_125020672_125020770_125026811_125026911_125028391_125028479_125029643_125029740_125055875_125056008_125142632_125142678_125143384
H1_mix_00087147	chr9	-	1968	19	FSM	ENSG00000173611.18	ENST00000373549.8	1968	19	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	10.4927958825138	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAGTTTTCATTTTCCA	0	True	NA	NA	False	ATTAAA	-19	NA	125143496	124952787	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_124952954_124971369_124971471_124971670_124971845_124976113_124976187_124994933_124995016_124999890_124999991_125001964_125002044_125003113_125003216_125003468_125003571_125018798_125018952_125019106_125019206_125020672_125020770_125026811_125026911_125028391_125028479_125029643_125029740_125055875_125056008_125065989_125066059_125142632_125142678_125143384
H1_mix_00087148	chr9	-	682	1	FSM	ENSG00000177736.4	ENST00000411625.2	547	1	-313	178	-313	-178	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATCTGGTTATCTTCTC	NA	False	NA	NA	False	NA	NA	NA	124969153	124968471	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_124968500_124969200
H1_mix_00087149	chr9	-	681	4	NNC	ENSG00000173611.18	novel	546	2	NA	NA	0	-52293	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_1	9.56846672960488	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTGTACTTTTGGTATT	0	True	NA	-8	True	AATAAA	-27	NA	125143496	125052203	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_125052596_125055875_125056008_125142632_125142678_125143384
H1_mix_00087150	chr9	-	4103	7	FSM	ENSG00000119414.12	ENST00000373547.9	4103	7	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_2	21.4864298259778	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGCTTGACTGGTGA	-17	True	NA	-1	True	ATTAAA	-18	NA	125189803	125146572	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_125149922_125153532_125153743_125153905_125153986_125158240_125158383_125160840_125160907_125171084_125171181_125189643
H1_mix_00087151	chr9	-	4169	6	FSM	ENSG00000119414.12	ENST00000415905.5	4172	6	2	1	2	-1	multi-exon	FALSE	canonical	3	16	junction_4	159.784104340826	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTTGCTTGACTGGT	NA	False	NA	-3	True	ATTAAA	-16	NA	125189937	125146574	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_125149922_125153532_125153743_125153905_125153986_125158240_125158383_125171084_125171181_125189643
H1_mix_00087152	chr9	-	3925	8	FSM	ENSG00000044574.9	ENST00000324460.7	3921	8	1	-5	0	5	multi-exon	FALSE	canonical	3	5358	junction_5	448.228394769398	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGATGTCTATAGTTTG	-3	True	NA	-3	True	ATTAAA	-20	NA	125241342	125234847	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_125237155_125238140_125238309_125238589_125238828_125238940_125239332_125239420_125239534_125240171_125240310_125240675_125240908_125241004
H1_mix_00087153	chr9	-	4941	5	FSM	ENSG00000044574.9	ENST00000680640.1	4929	5	0	-12	0	5	multi-exon	FALSE	canonical	3	5704	junction_4	148.120516809792	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGATGTCTATAGTTTG	-3	True	NA	-3	True	ATTAAA	-20	NA	125241342	125234847	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_125237155_125238140_125238828_125238940_125239332_125239420_125240310_125240675
H1_mix_00087154	chr9	-	4040	7	FSM	ENSG00000044574.9	ENST00000681544.1	4028	7	0	-12	0	5	multi-exon	FALSE	canonical	3	5358	junction_4	483.934482480153	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGATGTCTATAGTTTG	1	True	NA	-3	True	ATTAAA	-20	NA	125241368	125234847	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_125237155_125238140_125238309_125238589_125238828_125238940_125239534_125240171_125240310_125240675_125240908_125241004
H1_mix_00087155	chr9	-	4064	7	FSM	ENSG00000044574.9	ENST00000679355.1	4052	7	0	-12	0	5	multi-exon	FALSE	canonical	3	5358	junction_4	483.315085862445	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGATGTCTATAGTTTG	1	True	NA	-3	True	ATTAAA	-20	NA	125241368	125234847	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_125237155_125238140_125238309_125238589_125239332_125239420_125239534_125240171_125240310_125240675_125240908_125241004
H1_mix_00087158	chr9	-	3253	11	FSM	ENSG00000119487.17	ENST00000350766.7	3256	11	0	3	0	-3	multi-exon	FALSE	canonical	3	403	junction_4	147.322774885623	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTTGCATATTGTGTT	2	True	NA	NA	False	AATAAA	-15	NA	125707203	125437396	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_125439013_125444500_125444599_125467971_125468110_125484442_125484584_125543058_125543169_125559632_125559810_125585554_125585728_125657650_125657800_125669817_125669908_125672315_125672644_125706970
H1_mix_00087159	chr9	-	3364	12	FSM	ENSG00000119487.17	ENST00000265960.8	3369	12	0	5	0	-5	multi-exon	FALSE	canonical	3	425	junction_4	173.088426261796	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACACTTTTGCATATTGTG	-3	True	NA	NA	False	AATAAA	-13	NA	125707208	125437398	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_125439013_125444500_125444599_125467971_125468110_125484442_125484584_125506309_125506418_125543058_125543169_125559632_125559810_125585554_125585728_125657650_125657800_125669817_125669908_125672315_125672644_125706970
H1_mix_00087160	chr9	-	3251	11	FSM	ENSG00000119487.17	ENST00000373511.6	3252	11	0	1	0	0	multi-exon	FALSE	canonical	3	22	junction_3	271.295429375432	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGCATATTGTGTTGAG	-26	False	NA	NA	False	AATAAA	-18	NA	125707231	125437393	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_125439013_125444500_125444599_125467971_125468110_125506309_125506418_125543058_125543169_125559632_125559810_125585554_125585728_125657650_125657800_125669817_125669908_125672315_125672644_125706970
H1_mix_00087161	chr9	-	2977	10	FSM	ENSG00000119487.17	ENST00000394063.5	2977	10	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_9	249.914701497714	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGCATATTGTGTTGAG	NA	False	NA	NA	False	AATAAA	-18	NA	125707234	125437393	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_125439013_125444500_125444599_125467971_125468110_125484442_125484584_125506309_125506418_125543058_125543169_125559632_125559810_125585554_125585728_125657650_125657800_125706970
H1_mix_00087162	chr9	-	1587	8	FSM	ENSG00000119487.17	ENST00000394060.7	1586	8	0	-1	0	1	multi-exon	FALSE	canonical	3	48	junction_1	291.531144413878	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGTATTTCTTTACAGA	-26	False	NA	1	True	AATAAA	-23	NA	125707231	125521466	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_125521766_125543058_125543169_125559632_125559810_125585554_125585728_125657650_125657800_125669817_125669908_125672315_125672644_125706970
H1_mix_00087166	chr9	-	3459	5	FSM	ENSG00000136859.10	ENST00000373425.8	3443	5	0	-16	0	16	multi-exon	FALSE	canonical	3	26	junction_2	8.31790237980706	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGTTACTGTTTTAGA	-2	True	NA	1	True	AATAAA	-31	NA	127122635	127087331	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127089139_127091669_127091941_127093732_127093927_127107914_127108781_127122314
H1_mix_00087168	chr9	-	865	7	FSM	ENSG00000197958.13	ENST00000497825.5	864	7	0	-1	0	1	multi-exon	FALSE	canonical	3	284	junction_6	3665.5844463514	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGGTGTGGCGTCTTCC	-2	True	NA	-9	True	AATAAA	-24	NA	127451405	127447672	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127447727_127447876_127447990_127448336_127448424_127449280_127449363_127449609_127449709_127450730_127450805_127451049
H1_mix_00087169	chr9	-	635	7	FSM	ENSG00000197958.13	ENST00000361436.10	634	7	0	-1	0	1	multi-exon	FALSE	canonical	3	3317	junction_1	2225.11862355446	3479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGGTGTGGCGTCTTCC	-3	True	NA	-9	True	AATAAA	-24	NA	127451406	127447672	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127447727_127447876_127447990_127448336_127448424_127449280_127449363_127449609_127449709_127450730_127450805_127451280
H1_mix_00087172	chr9	-	4019	14	FSM	ENSG00000136830.12	ENST00000373312.4	3942	14	-72	-5	-69	1	multi-exon	FALSE	canonical	3	106	junction_7	21.4776614376054	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTTGAGTGGTGCTGTT	9911	False	NA	-2	True	AATAAA	-19	NA	127569145	127505337	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127507432_127507866_127507979_127508092_127508201_127508421_127508539_127508975_127509132_127510145_127510334_127516856_127517020_127517111_127517217_127517825_127517942_127523678_127523847_127525057_127525164_127527193_127527323_127531647_127531779_127568819
H1_mix_00087173	chr9	-	1262	5	FSM	ENSG00000187024.15	ENST00000543175.5	962	5	0	-300	0	3	multi-exon	FALSE	canonical	3	154	junction_3	19.9170153386495	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAAAGATGCT	-6	True	NA	NA	False	NA	NA	NA	127715663	127713506	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127714283_127714378_127714425_127714602_127714703_127714974_127715195_127715543
H1_mix_00087174	chr9	-	645	5	FSM	ENSG00000187024.15	ENST00000456267.5	645	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	68.7622716320513	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTAAAGTGGGGGTGACT	9270	False	NA	-37	True	NA	NA	NA	127715604	127713971	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127714190_127714378_127714425_127714602_127714703_127714974_127715195_127715543
H1_mix_00087176	chr9	-	1378	4	FSM	ENSG00000160404.18	ENST00000336067.10	1370	4	0	-8	0	8	multi-exon	FALSE	canonical	3	15	junction_1	16.8193010820572	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAGACTTTTAATTGCTC	16	True	NA	0	True	AATAAA	-27	NA	127735292	127731515	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127732279_127733384_127733561_127734298_127734565_127735119
H1_mix_00087177	chr9	-	1520	5	FSM	ENSG00000160404.18	ENST00000373284.10	1500	5	-19	-1	0	1	multi-exon	FALSE	canonical	3	46	junction_4	19.421315609402	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTTGCTAAGACTTTTA	-5	True	NA	-7	True	AATAAA	-20	NA	127735313	127731522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127732279_127732563_127732692_127733384_127733561_127734298_127734565_127735119
H1_mix_00087178	chr9	-	933	4	FSM	ENSG00000160404.18	ENST00000496460.5	933	4	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	8.25967446224258	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAAACCCCTGGTCACCCC	-5	True	NA	NA	False	NA	NA	NA	127735313	127731843	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127732279_127732563_127732692_127733384_127733561_127735119
H1_mix_00087179	chr9	-	2669	10	FSM	ENSG00000095370.20	ENST00000420366.5	2682	10	14	-1	14	0	multi-exon	TRUE	canonical	3	18	junction_4	6.97260955099433	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTCTCTCGGGCTCCTG	-23	True	NA	-1	True	AATAAA	-17	NA	127755290	127738316	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127738922_127739681_127739889_127740257_127740370_127741787_127741960_127742848_127742965_127744563_127745100_127747146_127747272_127749210_127749666_127751171_127751301_127755078
H1_mix_00087180	chr9	-	2947	15	FSM	ENSG00000106991.14	ENST00000373203.9	2946	15	0	-1	0	1	multi-exon	FALSE	canonical	2	5	junction_10	5.61521257343816	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGTTGGGCTGGGAGA	-2	True	NA	-1	True	AATAAA	-18	NA	127854658	127815014	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127815807_127815942_127816054_127817148_127817204_127818119_127818378_127818715_127818833_127819621_127819661_127819899_127820038_127824303_127824447_127824799_127824975_127825230_127825358_127825694_127825861_127826509_127826673_127829686_127829828_127843093_127843246_127854288
H1_mix_00087181	chr9	-	2265	7	FSM	ENSG00000106992.19	ENST00000644144.2	2192	7	-78	5	-78	-5	multi-exon	FALSE	canonical	3	340	junction_6	19.3168032782055	165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAGGTGAATCTATTGAA	NA	False	NA	NA	False	AATAAA	-14	NA	127877753	127866490	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127868077_127868320_127868513_127871822_127871940_127872689_127872854_127873025_127873062_127874610_127874650_127877622
H1_mix_00087183	chr9	-	2410	7	FSM	ENSG00000160408.16	ENST00000373146.6	2410	7	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_6	86.6038233695385	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGTGTCCTGTGTCACCT	-13	True	NA	-16	True	AATAAA	-17	NA	127899603	127885320	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127886789_127887483_127887592_127890636_127891044_127894511_127894692_127896241_127896333_127897955_127898011_127899502
H1_mix_00087184	chr9	-	2449	7	FSM	ENSG00000160408.16	ENST00000373142.5	2448	7	0	-1	0	0	multi-exon	FALSE	canonical	3	11	junction_1	151.201208842904	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGTGTCCTGTGTCACCT	8	True	NA	-16	True	AATAAA	-17	NA	127899646	127885320	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127886785_127887483_127887592_127890636_127891044_127894511_127894692_127896241_127896333_127897955_127898011_127899502
H1_mix_00087185	chr9	-	2407	6	FSM	ENSG00000160408.16	ENST00000373144.7	2406	6	0	-1	0	0	multi-exon	FALSE	canonical	3	203	junction_5	88.1421579041494	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGTGTCCTGTGTCACCT	-1	True	NA	-16	True	AATAAA	-17	NA	127899655	127885320	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127886789_127887483_127887592_127890636_127891044_127894511_127894692_127896241_127896333_127899502
H1_mix_00087186	chr9	-	2362	7	FSM	ENSG00000160408.16	ENST00000291839.10	2357	7	0	-5	0	0	multi-exon	FALSE	canonical	3	51	junction_2	135.652333395174	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGTGTCCTGTGTCACCT	16	True	NA	-16	True	AATAAA	-17	NA	127899574	127885320	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127886789_127887483_127887592_127890655_127891044_127894511_127894692_127896241_127896333_127897955_127898011_127899502
H1_mix_00087187	chr9	-	2340	7	NIC	ENSG00000160408.16	novel	2448	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	11	junction_1	152.948793173838	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGCTTCGTGTCCTGTGT	-14	True	NA	-21	True	AATAAA	-12	NA	127899604	127885325	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_127886785_127887483_127887592_127890636_127891044_127894511_127894630_127896241_127896333_127897955_127898011_127899502
H1_mix_00087188	chr9	-	1715	6	FSM	ENSG00000136840.19	ENST00000335791.10	1706	6	0	-9	0	9	multi-exon	FALSE	canonical	3	70	junction_2	16.4146276229466	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCGTGGTCATGTGTCTGA	-24	True	NA	-1	True	NA	NA	NA	127917041	127907876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127908582_127909950_127910059_127912267_127912681_127914655_127914842_127916407_127916495_127916825
H1_mix_00087192	chr9	-	2176	10	FSM	ENSG00000167103.12	ENST00000388747.9	2176	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	34.3223643031482	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGACAGGCCCTCTGCT	-1	True	NA	-8	True	ATTAAA	-19	NA	127930777	127920880	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127922115_127925106_127925261_127925866_127925980_127927152_127927209_127927296_127927332_127927647_127927773_127928064_127928220_127928432_127928484_127929687_127929886_127930722
H1_mix_00087193	chr9	-	1765	5	FSM	ENSG00000167103.12	ENST00000300432.3	1104	5	-13	-648	-13	0	multi-exon	FALSE	canonical	3	46	junction_2	18.9340962287615	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGACAGGCCCTCTGCT	9995	False	NA	-8	True	ATTAAA	-19	NA	127927504	127920880	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127922115_127925106_127925261_127925866_127925980_127927152_127927209_127927296
H1_mix_00087194	chr9	-	1666	3	FSM	ENSG00000136908.18	ENST00000495270.1	1662	3	0	-4	0	4	multi-exon	FALSE	canonical	3	516	junction_2	311.5	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCCGTGTTTACCCAG	15	True	NA	-5	True	AATAAA	-20	NA	127937826	127935094	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127935781_127936552_127937524_127937817
H1_mix_00087195	chr9	-	916	4	FSM	ENSG00000136908.18	ENST00000314392.13	912	4	0	-4	0	4	multi-exon	FALSE	canonical	3	516	junction_3	257.294902138901	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCCGTGTTTACCCAG	-13	True	NA	-5	True	AATAAA	-20	NA	127937854	127935094	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127935781_127936552_127936656_127937433_127937524_127937817
H1_mix_00087198	chr9	-	4617	11	FSM	ENSG00000167106.12	ENST00000373095.6	4617	11	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_9	15.2515572975352	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGTTTTGTTTTTAC	3	True	NA	-6	True	ATTAAA	-19	NA	127980989	127940581	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127943238_127944614_127944685_127944776_127944899_127945366_127945563_127945648_127945754_127948070_127948226_127948367_127948415_127950422_127950540_127953574_127953605_127953804_127953926_127979991
H1_mix_00087199	chr9	-	4316	5	FSM	ENSG00000167106.12	ENST00000465821.5	4316	5	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_3	10.6389614154766	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGGTTTTTTTTTTTTCC	2585	False	NA	-8	True	AATAAA	-14	NA	127948159	127940880	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127944685_127944776_127944899_127945366_127945563_127945648_127945754_127948070
H1_mix_00087200	chr9	-	1854	3	NIC	ENSG00000171169.9	novel	3398	2	NA	NA	-1	2	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTGTCTTTATTGCTT	12	True	NA	1	True	ATTAAA	-26	NA	128067321	128061230	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_128061827_128063373_128063901_128066590
H1_mix_00087201	chr9	-	3408	2	FSM	ENSG00000171169.9	ENST00000373078.5	3398	2	-17	7	-17	-7	multi-exon	FALSE	canonical	3	25	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACACACATCTCTGTGTCT	-4	True	NA	-8	True	ATTAAA	-17	NA	128067337	128061239	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128063901_128066590
H1_mix_00087202	chr9	-	3359	5	NNC	ENSG00000234771.3	novel	6391	5	NA	NA	-147	-2434	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	3.41869858279434	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCCCAGATTCTCATCAAA	9577	False	NA	NA	False	NA	NA	NA	128118840	128111014	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_128111800_128113372_128114687_128115073_128115290_128117709_128117836_128117922
H1_mix_00087203	chr9	-	1598	7	FSM	ENSG00000148334.16	ENST00000338961.11	1598	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	401.324231624367	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGTGTGGCTGAGTGCT	6	True	NA	-1	True	AATAAA	-42	NA	128127729	128120692	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128121274_128122361_128122480_128122933_128123135_128123701_128123852_128124491_128124551_128125243_128125442_128127438
H1_mix_00087205	chr9	-	1615	8	FSM	ENSG00000148334.16	ENST00000277462.9	1614	8	0	-1	0	0	multi-exon	FALSE	canonical	0	0	junction_2	500.67179359133	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGTGTGGCTGAGTGCT	NA	False	NA	-1	True	AATAAA	-42	NA	128128462	128120692	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128121274_128122361_128122480_128122933_128123135_128123701_128123852_128124491_128124551_128124778_128124872_128125243_128125442_128128247
H1_mix_00087206	chr9	-	3473	5	FSM	ENSG00000148334.16	ENST00000493205.6	3473	5	0	0	0	0	multi-exon	FALSE	canonical	3	999	junction_4	28.5252081499855	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATGGCAGGCATCTCAT	1241	False	NA	-24	True	AATAAA	-19	NA	128127176	128120715	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128121274_128122361_128123135_128123701_128123852_128124491_128124551_128125243
H1_mix_00087207	chr9	-	1664	8	FSM	ENSG00000148334.16	ENST00000677651.1	1664	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	509.104455822944	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATGGCAGGCATCTCAT	10	True	NA	-24	True	AATAAA	-19	NA	128127725	128120715	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128121274_128122361_128122480_128122933_128123135_128123701_128123852_128124491_128124551_128124778_128124872_128125243_128125442_128127438
H1_mix_00087208	chr9	-	1831	8	FSM	ENSG00000148334.16	ENST00000679345.1	1831	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	514.493013776173	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATGGCAGGCATCTCAT	6	True	NA	-24	True	AATAAA	-19	NA	128127729	128120715	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128121274_128122361_128122647_128122933_128123135_128123701_128123848_128124491_128124551_128124778_128124872_128125243_128125442_128127438
H1_mix_00087209	chr9	-	3116	5	FSM	ENSG00000148334.16	ENST00000497109.6	3115	5	0	-1	0	0	multi-exon	FALSE	canonical	3	56	junction_2	443.290536781466	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATGGCAGGCATCTCAT	3	True	NA	-24	True	AATAAA	-19	NA	128127732	128120715	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128123135_128123701_128123848_128124491_128124551_128125243_128125442_128127438
H1_mix_00087210	chr9	-	3080	5	FSM	ENSG00000148334.16	ENST00000483625.6	3080	5	0	0	0	0	multi-exon	FALSE	canonical	3	999	junction_3	59.17083318663	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACTGGGACATGTTTGCA	0	True	NA	-67	True	NA	NA	NA	128127735	128120758	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128123135_128123701_128123852_128124491_128124551_128125243_128125442_128127438
H1_mix_00087215	chr9	-	854	3	FSM	ENSG00000148337.22	ENST00000485862.5	843	3	0	-11	0	10	multi-exon	FALSE	canonical	3	604	junction_1	28	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCTGTCTGGGTGGATA	1075	False	NA	-2	True	AATAAA	-33	NA	128167473	128166053	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128166407_128166758_128166881_128167094
H1_mix_00087218	chr9	-	2742	17	FSM	ENSG00000148337.22	ENST00000372954.5	2731	17	0	-11	0	10	multi-exon	TRUE	canonical	3	149	junction_14	121.852369693823	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCTGTCTGGGTGGATA	-1	True	NA	-2	True	AATAAA	-33	NA	128191568	128166053	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128166407_128166758_128166881_128167094_128167165_128169051_128169202_128169405_128169520_128170019_128170108_128176350_128176476_128177565_128177764_128178368_128178491_128178708_128178905_128179072_128179416_128180414_128180524_128180720_128180815_128185546_128185777_128190328_128190445_128190687_128190863_128191431
H1_mix_00087219	chr9	-	2986	17	FSM	ENSG00000148337.22	ENST00000372938.10	2975	17	0	-11	0	10	multi-exon	FALSE	canonical	3	326	junction_13	84.3756481456587	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCTGTCTGGGTGGATA	-5	True	NA	-2	True	AATAAA	-33	NA	128191572	128166053	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128166407_128166758_128166881_128167094_128167165_128169051_128169202_128169405_128169520_128170019_128170108_128176350_128176476_128177565_128177764_128178368_128178491_128178708_128179416_128180414_128180524_128180720_128180815_128185546_128185777_128187862_128187935_128190328_128190445_128190687_128190863_128191431
H1_mix_00087220	chr9	-	2917	18	FSM	ENSG00000148337.22	ENST00000357558.9	2907	18	0	-10	0	8	multi-exon	TRUE	canonical	3	104	junction_10	120.875983802439	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACTTCTGTCTGGGTGGA	-22	True	NA	-4	True	AATAAA	-31	NA	128191589	128166055	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128166407_128166758_128166881_128167094_128167165_128169051_128169202_128169405_128169520_128170019_128170108_128176350_128176476_128177565_128177764_128178368_128178491_128178708_128178905_128178988_128179416_128180414_128180524_128180720_128180815_128185546_128185777_128187862_128187935_128190328_128190445_128190687_128190863_128191431
H1_mix_00087221	chr9	-	2882	16	NIC	ENSG00000148337.22	novel	2975	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	149	junction_13	110.18723459034	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAGTTCCCACCAGTAC	10	True	NA	-19	True	AATAAA	-16	NA	128191557	128166070	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_128166407_128166758_128166881_128167094_128167165_128169051_128169202_128169405_128169520_128170019_128170108_128176350_128176476_128177565_128177764_128178368_128178491_128178708_128179416_128180414_128180524_128180720_128180815_128185546_128185777_128190328_128190445_128190687_128190863_128191431
H1_mix_00087230	chr9	-	4260	26	FSM	ENSG00000167110.19	ENST00000421699.8	4297	26	37	0	6	0	multi-exon	FALSE	canonical	3	41	junction_20	19.8322565534031	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTCTGCCTGATGTGTTC	43	False	NA	-12	True	AATAAA	-15	NA	128275989	128255828	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128257282_128257368_128257526_128257600_128257708_128257789_128257893_128257979_128258199_128258454_128258571_128259006_128259083_128259166_128259392_128260075_128260190_128260464_128260803_128261171_128261260_128261453_128261562_128261667_128261758_128262562_128262705_128263033_128263093_128265584_128265692_128265787_128265882_128265969_128266021_128266286_128266326_128267193_128267275_128267457_128267518_128267933_128267998_128268116_128268161_128268419_128268525_128273849_128273973_128275892
H1_mix_00087231	chr9	-	347	3	FSM	ENSG00000167110.19	ENST00000470630.6	556	3	158	51	158	0	multi-exon	FALSE	canonical	3	100	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCTGGGGCTGGGGTGA	827	False	NA	NA	False	NA	NA	NA	128261818	128261171	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128261260_128261453_128261562_128261667
H1_mix_00087234	chr9	-	5451	8	FSM	ENSG00000167112.10	ENST00000372890.6	5426	8	0	-25	0	25	multi-exon	FALSE	canonical	3	412	junction_2	36.1657183486443	291	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCACGTGTGTTAATCGC	-16	True	NA	-1	True	ATTAAA	-32	NA	128322447	128305133	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128309876_128310886_128311024_128311528_128311602_128313807_128313890_128315566_128315629_128317151_128317227_128321598_128321731_128322299
H1_mix_00087236	chr9	-	573	1	FSM	ENSG00000284185.1	ENST00000385220.1	97	1	83	-559	83	559	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAGAATTTGGAAAAACGAA	-1	True	NA	NA	False	NA	NA	NA	128392631	128392058	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128392100_128392600
H1_mix_00087237	chr9	-	1823	9	FSM	ENSG00000119333.12	ENST00000372715.7	1823	9	0	0	0	0	multi-exon	FALSE	canonical	3	648	junction_6	51.3710460765595	247	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATCATTTATTTGTCTTT	NA	False	NA	-9	True	AAGAAA	-19	NA	128656847	128633652	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128633983_128634225_128634384_128634688_128634922_128635091_128635260_128635657_128635768_128636280_128636439_128636917_128637028_128640690_128640940_128656540
H1_mix_00087242	chr9	-	1106	5	NIC	ENSG00000160446.19	novel	1146	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_1	194.333476272103	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACCATATCACTCCTTGC	2	True	NA	-16	True	TATAAA	-22	NA	128724109	128720872	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_128721481_128721650_128721818_128722008_128722087_128722437_128722575_128723993
H1_mix_00087243	chr9	-	1146	5	FSM	ENSG00000160446.19	ENST00000372663.9	1146	5	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_1	74.1834718788491	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACCATATCACTCCTTGC	-16	True	NA	-16	True	TATAAA	-22	NA	128724127	128720872	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128721503_128721650_128721818_128722008_128722087_128722437_128722575_128723993
H1_mix_00087245	chr9	-	4057	16	NIC	ENSG00000160445.11	novel	4293	16	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	94	junction_15	38.2601620487943	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGCGTCTTTTTTTGTGG	3	True	NA	-1	True	AATACA	-21	NA	128771925	128729785	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_128731395_128733425_128733529_128735333_128735432_128739930_128740120_128740771_128740888_128741534_128741655_128741799_128741842_128742529_128742746_128750615_128750790_128751121_128751269_128751412_128751528_128752672_128752850_128753163_128753601_128753808_128753960_128755407_128755660_128771814
H1_mix_00087246	chr9	-	4293	16	FSM	ENSG00000160445.11	ENST00000291900.7	4293	16	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_15	30.3808419165032	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGCGTCTTTTTTTGTGG	1	True	NA	-1	True	AATACA	-21	NA	128771927	128729785	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128731395_128733425_128733529_128735333_128735432_128739930_128740120_128740771_128740888_128741534_128741655_128741799_128741842_128742529_128742746_128750615_128750790_128751121_128751269_128751412_128751528_128752672_128752850_128753163_128753601_128753808_128753960_128755407_128755660_128771580
H1_mix_00087247	chr9	-	4263	12	FSM	ENSG00000198917.13	ENST00000361256.10	4259	12	0	-4	0	4	multi-exon	FALSE	canonical	3	334	junction_2	63.0100346199708	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAATTATCCTGAAACCC	6	True	NA	NA	False	AATAAA	-21	NA	128829794	128819646	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128822834_128823746_128823895_128824071_128824175_128824770_128824870_128824976_128825050_128826021_128826153_128826383_128826434_128826539_128826630_128827031_128827192_128828734_128828861_128829109_128829156_128829744
H1_mix_00087248	chr9	-	1976	13	FSM	ENSG00000171097.14	ENST00000302586.8	1971	13	0	-5	0	5	multi-exon	FALSE	canonical	3	120	junction_8	22.8587146036984	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTGTTGTTGTTGTTGT	-3	True	NA	0	True	AATGAA	-20	NA	128881950	128832936	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128833644_128833739_128833827_128835322_128835403_128835480_128835668_128835778_128835869_128835996_128836074_128836801_128836923_128837684_128837814_128838050_128838138_128838217_128838368_128842653_128842802_128845352_128845412_128881896
H1_mix_00087249	chr9	-	1877	13	NNC	ENSG00000171097.14	novel	1971	13	NA	NA	3	6	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_12	43.9648691823622	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGACGGCTTCTCTCTGCTT	25	True	NA	0	True	AATAAA	-25	NA	128882033	128833112	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_128833644_128833739_128833827_128835322_128835403_128835480_128835668_128835778_128835869_128835996_128836074_128836801_128836923_128837684_128837814_128838050_128838138_128838217_128838368_128842653_128842802_128845352_128845412_128881902
H1_mix_00087252	chr9	-	738	6	FSM	ENSG00000171097.14	ENST00000416084.5	736	6	-2	0	-2	0	multi-exon	FALSE	canonical	3	13	junction_5	62.0341841245615	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCCCTGGGCAAGGTACT	NA	False	NA	NA	False	NA	NA	NA	128846859	128837699	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128837814_128838050_128838138_128838217_128838368_128842653_128842802_128845352_128845412_128846679
H1_mix_00087253	chr9	-	2075	1	FSM	ENSG00000175283.8	ENST00000372586.4	2074	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGTTTTGCTGATATAT	6	True	NA	-6	True	AATAAA	-18	NA	128947603	128945528	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128945500_128947600
H1_mix_00087254	chr9	-	540	1	FSM	ENSG00000267834.1	ENST00000594418.1	497	1	-70	27	-70	-27	mono-exon	FALSE	NA	NA	NA	NA	NA	725	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTCTCAAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	129005068	129004528	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_129004500_129005100
H1_mix_00087255	chr9	-	3013	11	FSM	ENSG00000148341.18	ENST00000372564.8	3013	11	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_5	71.1924153263534	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGAGTGTGGAAAACAGG	-18	True	NA	3	True	TATAAA	-29	NA	129028331	129007035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_129008792_129009105_129009347_129009770_129009872_129010119_129010210_129010669_129010694_129012235_129012299_129014410_129014504_129014770_129014905_129021090_129021220_129022281_129022424_129028091
H1_mix_00087256	chr9	-	2794	6	FSM	ENSG00000148341.18	ENST00000479237.5	2794	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	300.642911108844	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATTGTGGAGCGGACT	NA	False	NA	-17	True	AAAAAG	-10	NA	129012016	129007791	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_129008792_129009105_129009347_129009452_129009468_129009770_129009872_129010119_129010210_129010669
H1_mix_00087257	chr9	-	4828	4	FSM	ENSG00000148341.18	ENST00000461811.5	4828	4	0	0	0	0	multi-exon	FALSE	canonical	3	578	junction_2	45.3896708758967	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGGCCGCAGTCTTCACCT	NA	False	NA	-108	True	NA	NA	NA	129013950	129008136	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_129008792_129009105_129009347_129009770_129009872_129010119
H1_mix_00087263	chr9	-	2821	15	FSM	ENSG00000095321.18	ENST00000458362.5	2253	15	35	-603	0	0	multi-exon	FALSE	canonical	3	14	junction_13	18.7458839019478	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGTTTCAGCTGAGAGG	-18	True	NA	-1	True	AATAAA	-20	NA	129110747	129094793	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_129095613_129095997_129096136_129097249_129097313_129098012_129098149_129098248_129098372_129098530_129098651_129099865_129099967_129100510_129100690_129101882_129102058_129102399_129102566_129103012_129103067_129104187_129104307_129107813_129108078_129109178_129109278_129110482
H1_mix_00087264	chr9	-	3101	15	FSM	ENSG00000095321.18	ENST00000681622.1	3089	15	0	-12	0	0	multi-exon	FALSE	canonical	0	0	junction_13	21.2295519865828	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGTTTCAGCTGAGAGG	-18	True	NA	-1	True	AATAAA	-20	NA	129110747	129094793	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_129095613_129095997_129096136_129097249_129097313_129098012_129098149_129098248_129098372_129098530_129098651_129099865_129099967_129100510_129100690_129101882_129102058_129102399_129102566_129103012_129103067_129104187_129104307_129107813_129108078_129108898_129109278_129110482
H1_mix_00087265	chr9	-	2768	14	FSM	ENSG00000095321.18	ENST00000318080.7	2768	14	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_9	8.60576385904431	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGTTTCAGCTGAGAGG	-64	True	NA	-1	True	AATAAA	-20	NA	129110793	129094793	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_129095613_129095997_129096136_129097249_129097313_129098012_129098149_129098248_129098372_129098530_129098651_129099865_129099967_129100510_129100690_129101882_129102058_129102399_129102566_129103012_129103067_129104187_129104307_129107813_129108078_129110482
H1_mix_00087266	chr9	-	969	2	FSM	ENSG00000095321.18	ENST00000393384.3	973	2	0	4	0	-4	multi-exon	FALSE	canonical	3	54	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCAGCTGGATGCAGTG	18	True	NA	NA	False	AATACA	-12	NA	129110711	129107337	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_129108078_129110482
H1_mix_00087267	chr9	-	4607	6	FSM	ENSG00000148331.12	ENST00000277458.5	4603	6	0	-4	0	3	multi-exon	FALSE	canonical	3	138	junction_2	18.3782480122562	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGAATGCAGTAAGTTAT	-18	True	NA	-5	True	AATAAA	-20	NA	129642151	129634600	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_129638458_129638572_129638660_129639201_129639311_129639401_129639509_129640540_129640723_129641886
H1_mix_00087268	chr9	-	1764	3	FSM	ENSG00000148344.11	ENST00000340607.5	1751	3	0	-13	0	-5	multi-exon	FALSE	canonical	3	15	junction_2	5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCGTCTTGGGTTGCGCGT	-1	True	NA	-7	True	ATTAAA	-29	NA	129753042	129738335	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_129739861_129748654_129748738_129752886
H1_mix_00087269	chr9	-	2080	5	FSM	ENSG00000136827.12	ENST00000351698.5	2080	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	198.322968916866	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGAGTACGTTTTTGAA	-10	True	NA	-2	True	AATAAA	-16	NA	129824136	129812941	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_129814223_129818519_129818648_129818744_129818921_129822580_129822847_129823907
H1_mix_00087270	chr9	-	1668	2	FSM	ENSG00000136827.12	ENST00000473084.1	1668	2	0	0	0	0	multi-exon	FALSE	canonical	3	460	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCTTGTAGCAGACCTGC	22	True	NA	NA	False	AATAAA	-20	NA	129824104	129821375	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_129822847_129823907
H1_mix_00087271	chr9	-	1798	9	FSM	ENSG00000136819.15	ENST00000372447.7	1795	9	0	-3	0	3	multi-exon	FALSE	canonical	3	485	junction_1	78.4098805954964	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTTGTATTATGTTTC	-2	True	NA	NA	False	ATTAAA	-21	NA	129835275	129827286	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_129828253_129829204_129829304_129829404_129829542_129830870_129831069_129831895_129831974_129833446_129833518_129833657_129833710_129834706_129834767_129835138
H1_mix_00087273	chr9	-	5463	17	FSM	ENSG00000187239.17	ENST00000446176.7	5420	17	-35	-8	-30	8	multi-exon	FALSE	canonical	3	15	junction_6	17.1823856027037	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGGGACTGTTTTGTTGC	-3	True	NA	-2	True	AATAAA	-21	NA	130043224	129887178	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_129890547_129895837_129895997_129899964_129900102_129900425_129900548_129902868_129903002_129908889_129909000_129915965_129915981_129923843_129924027_129924959_129925158_129927194_129927342_129929566_129929696_129957359_129957465_129958490_129958554_129978464_129978613_129979317_129979375_129994842_129994959_130042951
H1_mix_00087274	chr9	-	5474	16	FSM	ENSG00000187239.17	ENST00000420781.5	5410	16	-64	0	-64	0	multi-exon	FALSE	canonical	3	29	junction_1	11.9174941437647	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCGTGTCACGGGACTGT	NA	False	NA	-10	True	AATAAA	-13	NA	130043258	129887186	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_129890547_129895837_129895997_129899964_129900102_129900425_129900548_129902868_129903002_129908889_129909000_129923843_129924027_129924959_129925158_129927194_129927342_129929566_129929696_129957359_129957465_129958490_129958554_129978464_129978613_129979317_129979375_129994842_129994959_130042951
H1_mix_00087275	chr9	-	2559	15	NIC	ENSG00000187239.17	novel	5410	16	NA	NA	11	7	combination_of_known_junctions	FALSE	canonical	3	21	junction_6	13.3790881602597	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGTTTTTACTTAAAC	17	True	NA	0	True	AGTAAA	-26	NA	130043156	129895260	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_129895997_129899964_129900102_129900425_129900548_129902868_129903002_129908889_129909000_129923843_129923997_129924959_129925158_129927194_129927342_129929566_129929696_129957359_129957465_129958490_129958554_129978464_129978613_129979317_129979375_129994842_129994959_130042951
H1_mix_00087277	chr9	-	3110	8	FSM	ENSG00000130720.13	ENST00000448616.5	3119	8	0	9	0	-7	multi-exon	FALSE	canonical	3	12	junction_6	4.15515416349971	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCGCAGATGTCTGCAGCG	8430	False	NA	-8	True	NA	NA	NA	130939068	130902446	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_130904324_130905233_130905414_130911791_130911889_130923743_130923881_130924236_130924397_130929566_130930047_130938535_130938649_130939002
H1_mix_00087279	chr9	-	453	3	FSM	ENSG00000130720.13	ENST00000486250.5	449	3	0	-4	0	4	multi-exon	FALSE	canonical	3	26	junction_2	15.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGGGTATTGTGATTTTC	8359	False	NA	2	True	AATAAA	-20	NA	130939139	130938012	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_130938216_130938535_130938649_130939002
H1_mix_00087281	chr9	-	2158	7	FSM	ENSG00000130717.13	ENST00000372215.5	2162	7	4	0	0	0	multi-exon	FALSE	canonical	3	425	junction_3	39.4785455096253	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCAGTTGGTTCCTTTTTT	-4	True	NA	-4	True	AATAAA	-21	NA	131531259	131523800	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_131525222_131525928_131525978_131528943_131529039_131529127_131529271_131529487_131529585_131530485_131530646_131531066
H1_mix_00087283	chr9	-	6199	24	NNC	ENSG00000107263.19	novel	6760	27	NA	NA	52	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	84.5778799058961	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATGTCCGCGCCCAGCT	-27	True	NA	-7	True	AATAAA	-21	NA	131740022	131576774	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_131579648_131580262_131580392_131582604_131582703_131584310_131584413_131584517_131584597_131587735_131587831_131587941_131588027_131588800_131588987_131589885_131589975_131592094_131592184_131596297_131596374_131598198_131598311_131602060_131602150_131621795_131621999_131625921_131626423_131627912_131628097_131628548_131628673_131629101_131629255_131630235_131630325_131638634_131638792_131643238_131643418_131650128_131650243_131650809_131650950_131739769
H1_mix_00087284	chr9	-	6257	24	FSM	ENSG00000107263.19	ENST00000372195.5	6256	24	1	-2	1	2	multi-exon	FALSE	canonical	0	0	junction_9	84.5778799058961	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGCGCCCAGCTGCATGTG	22	True	NA	0	True	AATAAA	-28	NA	131740073	131576767	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_131579648_131580262_131580392_131582604_131582703_131584310_131584413_131584517_131584597_131587735_131587831_131587941_131588027_131588800_131588987_131589885_131589979_131592098_131592184_131596297_131596374_131598198_131598311_131602060_131602150_131621795_131621999_131625921_131626423_131627912_131628097_131628548_131628673_131629101_131629255_131630235_131630325_131638634_131638792_131643238_131643418_131650128_131650243_131650809_131650950_131739769
H1_mix_00087286	chr9	-	6141	23	NNC	ENSG00000107263.19	novel	6256	24	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	79.870310685045	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGCGCCCAGCTGCATG	22	True	NA	-2	True	AATAAA	-26	NA	131740073	131576769	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_131579648_131580262_131580392_131582604_131582703_131584310_131584413_131584517_131584597_131587735_131587831_131587941_131588027_131588800_131588987_131589885_131589975_131592094_131592184_131596297_131596374_131598198_131598311_131602060_131602150_131621795_131621999_131625921_131626423_131627912_131628097_131628548_131628673_131629101_131629255_131630235_131630325_131638634_131638792_131643238_131643418_131650809_131650950_131739769
H1_mix_00087288	chr9	-	1280	7	FSM	ENSG00000160563.14	ENST00000357028.6	1281	7	0	1	0	-1	multi-exon	FALSE	canonical	1	4	junction_3	152.876493360563	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTTTGTCTCCTGTTTGT	0	True	NA	-3	True	AATAAA	-19	NA	132079866	131860107	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_131860673_131863062_131863141_131884057_131884100_131939380_131939475_132014336_132014468_132077441_132077587_132079641
H1_mix_00087289	chr9	-	1389	8	FSM	ENSG00000160563.14	ENST00000292035.10	1385	8	0	-4	0	-1	multi-exon	FALSE	canonical	3	394	junction_5	15.094261647854	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTTTGTCTCCTGTTTGT	-1	True	NA	-3	True	AATAAA	-19	NA	132079867	131860107	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_131860673_131863062_131863141_131884057_131884100_131893884_131893993_131939380_131939475_132014336_132014468_132077441_132077587_132079641
H1_mix_00087291	chr9	-	5701	17	FSM	ENSG00000107290.14	ENST00000436441.5	5730	17	0	29	0	-29	multi-exon	TRUE	canonical	3	22	junction_1	25.8647322622911	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTCAGATATAAAAAGTTT	NA	False	NA	54	True	NA	NA	NA	132311856	132261384	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_132264986_132269402_132269490_132269614_132269703_132271709_132271809_132275255_132275421_132277059_132277153_132278069_132278258_132281466_132281575_132283263_132283414_132286422_132286495_132288235_132288352_132288549_132288652_132295871_132296029_132296886_132297055_132298079_132298313_132300629_132300804_132311756
H1_mix_00087292	chr9	-	11072	26	FSM	ENSG00000107290.14	ENST00000224140.6	11101	26	0	29	0	-29	multi-exon	FALSE	canonical	3	48	junction_21	20.2118381153224	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTCAGATATAAAAAGTTT	-6	True	NA	54	True	NA	NA	NA	132354986	132261384	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_132264986_132269614_132269703_132271709_132271809_132275255_132275421_132277059_132277153_132278069_132278258_132281466_132281575_132283263_132283414_132286422_132286495_132288235_132288352_132288549_132288652_132295871_132296029_132296886_132297055_132298079_132298313_132300629_132300804_132311756_132311857_132326323_132330500_132331051_132331140_132331276_132331449_132334607_132334728_132336295_132336516_132342689_132342800_132346260_132346472_132349251_132349436_132353648_132353756_132354916
H1_mix_00087293	chr9	-	11098	27	NIC	ENSG00000107290.14	novel	11101	26	NA	NA	6	-84	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	24.1570306572955	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGTCTGCCATTTGGTTT	0	True	NA	-1	True	AGTAAA	-20	NA	132354980	132261439	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_132264986_132269402_132269490_132269614_132269703_132271709_132271809_132275255_132275421_132277059_132277153_132278069_132278258_132281466_132281575_132283263_132283414_132286422_132286495_132288235_132288352_132288549_132288652_132295871_132296029_132296886_132297055_132298079_132298313_132300629_132300804_132311756_132311857_132326323_132330500_132331051_132331140_132331276_132331449_132334607_132334728_132336295_132336516_132342689_132342800_132346260_132346472_132349251_132349436_132353648_132353756_132354916
H1_mix_00087295	chr9	-	3137	11	FSM	ENSG00000125482.13	ENST00000334270.3	3143	11	6	0	6	0	multi-exon	FALSE	canonical	3	120	junction_10	22.1494920934996	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGGAACATATGAATTGA	-4	True	NA	64	True	ATTAAA	-42	NA	132406834	132375547	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_132376169_132379058_132379145_132386555_132386622_132388138_132388229_132390596_132390832_132392075_132392207_132396432_132396512_132398140_132398327_132400034_132400259_132401454_132402829_132406789
H1_mix_00087297	chr9	-	4601	20	FSM	ENSG00000125485.18	ENST00000372159.8	4159	20	-418	-24	0	24	multi-exon	FALSE	canonical	3	52	junction_3	17.6063448648885	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAGGCACCAATTAGGCA	1	False	NA	25	True	AATAAA	-40	NA	132670401	132592972	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_132595113_132612086_132612256_132618329_132618442_132625663_132625746_132630263_132630404_132632040_132632092_132642003_132642064_132645894_132646072_132646822_132647059_132648188_132648296_132648431_132648552_132650233_132650299_132651074_132651117_132652447_132652493_132658670_132658736_132659709_132659781_132661207_132661252_132662260_132662337_132662438_132662696_132669859
H1_mix_00087298	chr9	-	6850	3	ISM	ENSG00000125485.18	ENST00000372159.8	4159	20	45797	1292	-11873	-1292	3prime_fragment	FALSE	canonical	3	78	junction_2	6	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGTGGTCCCTCTTATTT	NA	False	NA	-1	True	NA	NA	NA	132624186	132594288	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_132595113_132612086_132612256_132618329
H1_mix_00087299	chr9	-	1335	7	FSM	ENSG00000125485.18	ENST00000480876.3	1333	7	0	-2	0	2	multi-exon	FALSE	canonical	2	9	junction_1	36.3428886517783	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGCTTGAGTCTGTGTT	1	False	NA	1	True	AATAAA	-26	NA	132670401	132658078	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_132658359_132658670_132658736_132659709_132659781_132661207_132661252_132662260_132662337_132662438_132662696_132669859
H1_mix_00087300	chr9	-	1597	13	FSM	ENSG00000165695.10	ENST00000298545.4	1579	13	-18	0	-18	0	multi-exon	FALSE	canonical	2	3	junction_3	4.03026742978125	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGTACGTCCTGAAGGTG	518	False	NA	NA	False	AATAAA	-16	NA	132878302	132725577	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_132725926_132727453_132727535_132792633_132792776_132814637_132814728_132823204_132823337_132826853_132827055_132828012_132828085_132828644_132828727_132854856_132854926_132863664_132863779_132866903_132866954_132875114_132875200_132878171
H1_mix_00087302	chr9	-	8598	23	FSM	ENSG00000165699.15	ENST00000298552.9	8598	23	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_6	28.5539940903615	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCTGTGTGGACATGGA	-1	True	NA	-2	True	AATAAA	-20	NA	132944616	132891348	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_132896755_132897183_132897346_132897422_132897611_132900714_132900838_132901588_132901700_132902604_132902788_132903650_132903818_132904410_132904455_132905580_132906140_132906730_132906836_132907300_132907371_132910570_132910693_132911001_132911114_132911452_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944542
H1_mix_00087303	chr9	-	8582	23	FSM	ENSG00000165699.15	ENST00000646625.1	8582	23	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_6	28.4229057319609	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTCTGCTGTGTGGACA	755	False	NA	-6	True	AATAAA	-16	NA	132944633	132891352	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_132896755_132897183_132897346_132897422_132897611_132900714_132900838_132901588_132901700_132902604_132902788_132903650_132903818_132904410_132904455_132905580_132906140_132906730_132906836_132907300_132907371_132910570_132910693_132911001_132911114_132911452_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944571
H1_mix_00087306	chr9	-	2354	12	FSM	ENSG00000165699.15	ENST00000645150.1	2232	12	17	-139	0	84	multi-exon	FALSE	canonical	3	46	junction_1	26.4002880024361	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTCTGGCCCTCATGCA	-1	True	NA	NA	False	AATAGA	-44	NA	132944616	132909667	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_132910693_132911001_132911114_132911452_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944571
H1_mix_00087307	chr9	-	2299	12	FSM	ENSG00000165699.15	ENST00000642745.1	2299	12	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	26.8897350533558	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAGAACATGTATGTGTAA	-1	True	NA	51	True	ATTAAA	-10	NA	132944616	132909751	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_132910693_132911001_132911114_132911452_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944542
H1_mix_00087312	chr9	-	3884	18	FSM	ENSG00000160271.16	ENST00000393160.7	3801	18	-83	0	-83	0	multi-exon	FALSE	canonical	3	55	junction_15	19.8520479101873	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTCATTACAGTTTTG	-1	True	NA	NA	False	ATTAAA	-18	NA	133149417	133097719	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133098763_133100267_133100383_133101519_133101763_133101937_133102140_133102475_133102572_133102778_133102901_133103229_133103263_133103746_133103834_133104262_133104332_133105931_133106017_133106644_133106749_133107084_133107301_133107987_133108407_133108672_133108867_133109625_133109722_133110295_133110490_133112041_133112153_133148962
H1_mix_00087313	chr9	-	3861	18	NIC	ENSG00000160271.16	novel	3801	18	NA	NA	-99	-1	combination_of_known_junctions	FALSE	canonical	3	73	junction_15	16.4289389371948	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCCTGGTCATTACAGTT	-17	True	NA	NA	False	ATTAAA	-15	NA	133149433	133097722	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_133098763_133100267_133100383_133101519_133101763_133101937_133102140_133102475_133102572_133102778_133102901_133103229_133103263_133103746_133103834_133104262_133104332_133105931_133106017_133106644_133106749_133107084_133107301_133107987_133108407_133108672_133108867_133109625_133109686_133110295_133110490_133112041_133112153_133148962
H1_mix_00087314	chr9	-	1964	7	FSM	ENSG00000148288.13	ENST00000372040.9	1954	7	0	-10	0	10	multi-exon	FALSE	canonical	2	5	junction_1	4.74926894959167	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTGTTTTGTTTTTG	-5	True	NA	-10	True	AATAAA	-32	NA	133163914	133152937	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133154262_133155177_133155313_133155900_133155937_133156014_133156066_133161466_133161533_133162341_133162533_133163753
H1_mix_00087315	chr9	-	1059	10	NNC	ENSG00000148290.10	novel	1092	9	NA	NA	0	29559	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	197.190326059262	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATACAAAAATTAGCCAGAT	-14	True	NA	NA	False	NA	NA	NA	133356485	133322198	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_133322219_133351808_133351983_133352060_133352143_133352445_133352609_133352693_133352767_133353748_133353941_133354658_133354742_133354823_133354958_133356268_133356321_133356399
H1_mix_00087316	chr9	-	4053	2	FSM	ENSG00000148296.7	ENST00000468290.1	935	2	-229	-2889	-229	-141	multi-exon	FALSE	canonical	3	368	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTCTTGTGTGTGT	8734	False	NA	-2	True	NA	NA	NA	133333168	133328916	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133332349_133332547
H1_mix_00087317	chr9	-	4235	5	FSM	ENSG00000148296.7	ENST00000372022.6	4235	5	0	0	0	0	multi-exon	TRUE	canonical	3	337	junction_3	18.2397231338636	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACACTGGATTTAATTCAG	5	True	NA	NA	False	AATAAA	-18	NA	133336188	133328775	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133332349_133332547_133332761_133333717_133333807_133334391_133334602_133336038
H1_mix_00087318	chr9	-	4044	5	FSM	ENSG00000148297.16	ENST00000343730.10	4044	5	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	113.19755960267	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAGAAAAAGAAATTA	-42	True	NA	NA	False	NA	NA	NA	133348131	133338311	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133341695_133344124_133344334_133345171_133345253_133346539_133346701_133347921
H1_mix_00087319	chr9	-	4289	4	FSM	ENSG00000148297.16	ENST00000610888.4	3867	4	0	-422	0	422	multi-exon	FALSE	canonical	3	390	junction_3	15.1070255914995	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGGGAGCACAGTTCGTC	-28	True	NA	NA	False	NA	NA	NA	133348117	133340482	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133344334_133345171_133345253_133346539_133346701_133347921
H1_mix_00087321	chr9	-	3948	4	FSM	ENSG00000148297.16	ENST00000457204.2	561	4	-87	-3300	-87	0	multi-exon	FALSE	canonical	3	59	junction_3	169.393690030716	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGCTCTTTCTTCCTCA	8253	False	NA	-9	True	ATTAAA	-20	NA	133348218	133340904	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133344334_133345171_133345253_133346539_133346701_133347941
H1_mix_00087322	chr9	-	1129	9	FSM	ENSG00000148290.10	ENST00000371974.8	1092	9	2	-39	0	39	multi-exon	FALSE	canonical	3	519	junction_8	51.5156226304215	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAACAAAATGCCTGGTTTA	-14	True	NA	85	True	NA	NA	NA	133356485	133351718	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133351983_133352060_133352143_133352445_133352609_133352693_133352767_133353748_133353941_133354658_133354742_133354823_133354958_133356268_133356321_133356399
H1_mix_00087323	chr9	-	1077	8	FSM	ENSG00000148290.10	ENST00000615505.4	991	8	0	-86	0	39	multi-exon	FALSE	canonical	3	82	junction_7	190.997275330496	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAACAAAATGCCTGGTTTA	-14	True	NA	85	True	NA	NA	NA	133356485	133351718	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133351983_133352060_133352143_133352445_133352609_133352693_133352767_133353748_133353941_133354658_133354742_133354823_133354958_133356399
H1_mix_00087324	chr9	-	2944	6	FSM	ENSG00000148248.14	ENST00000371989.8	2930	6	0	-14	0	0	multi-exon	FALSE	canonical	3	1357	junction_2	34.424409944108	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCGTTGCCCAGCCTGAA	0	True	NA	-1	True	AATAAA	-32	NA	133376060	133361449	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133363760_133364839_133365027_133365984_133366029_133366598_133366676_133367258_133367446_133375921
H1_mix_00087325	chr9	-	2329	8	FSM	ENSG00000148300.12	ENST00000371942.8	2326	8	0	-3	0	0	multi-exon	TRUE	canonical	3	261	junction_5	17.0605165364298	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGTGGAGGCTCAGTGT	7	True	NA	-34	True	AATAAA	-23	NA	133418010	133406058	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133407073_133407806_133407882_133408767_133408843_133410984_133411074_133412298_133412493_133412777_133412922_133414664_133415012_133417619
H1_mix_00087326	chr9	-	1899	6	FSM	ENSG00000148300.12	ENST00000371935.6	1899	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	141.726497169725	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGTGGAGGCTCAGTGT	9684	False	NA	-34	True	AATAAA	-23	NA	133418096	133406058	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133407073_133407806_133407882_133408767_133408843_133410984_133411074_133414664_133414834_133417619
H1_mix_00087327	chr9	-	2503	10	FSM	ENSG00000160326.14	ENST00000371899.9	2491	10	3	-15	0	15	multi-exon	FALSE	canonical	0	0	junction_6	40.4557371291967	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGGGGTCTACTCCAGGA	2	True	NA	0	True	AATAAA	-31	NA	133479096	133471078	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133472177_133473104_133473251_133473414_133473601_133473979_133474089_133474960_133475114_133475399_133475612_133476236_133476337_133477034_133477242_133478253_133478417_133478967
H1_mix_00087328	chr9	-	2317	9	FSM	ENSG00000160326.14	ENST00000371897.8	2301	9	0	-16	0	15	multi-exon	FALSE	canonical	0	0	junction_5	50.6920851810221	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGGGGTCTACTCCAGGA	2	True	NA	0	True	AATAAA	-31	NA	133479096	133471078	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133472177_133473104_133473251_133473979_133474089_133474960_133475114_133475399_133475612_133476236_133476337_133477034_133477242_133478253_133478417_133478967
H1_mix_00087329	chr9	-	3427	8	FSM	ENSG00000160326.14	ENST00000485978.1	3417	8	0	-10	0	9	multi-exon	FALSE	canonical	0	0	junction_5	42.9308889319776	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAAGAGTGGGGTCTACT	2	True	NA	-6	True	AATAAA	-25	NA	133479096	133471084	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133472177_133473104_133473251_133473414_133474089_133474960_133475114_133475399_133475612_133476236_133476337_133477034_133477242_133478253
H1_mix_00087330	chr9	-	527	4	FSM	ENSG00000187616.5	ENST00000413714.1	531	4	4	0	4	0	multi-exon	FALSE	canonical	1	1	junction_1	0.471404520791032	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGGGGCGCTGGCCCTGA	NA	False	NA	NA	False	NA	NA	NA	133528608	133515530	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133515608_133518873_133519023_133520173_133520289_133528422
H1_mix_00087331	chr9	-	3222	21	FSM	ENSG00000123453.19	ENST00000439388.6	3215	21	0	-7	0	7	multi-exon	TRUE	canonical	3	20	junction_7	6.79613860953409	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAATAGGCTTCATCTTTT	-8	True	NA	-13	True	AGTAAA	-32	NA	133738352	133663552	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133664015_133666734_133666871_133670583_133670753_133671534_133671698_133685192_133685287_133690379_133690528_133694257_133694372_133696222_133696362_133702915_133703030_133704947_133705032_133708286_133708429_133712618_133712710_133713037_133713125_133717325_133717456_133718937_133719043_133729764_133729866_133730063_133730188_133731304_133731485_133732422_133732602_133733842_133734204_133738253
H1_mix_00087332	chr9	-	2692	17	NIC	ENSG00000123453.19	novel	3215	21	NA	NA	28	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	11.179641094418	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCGAAGCAAATAGGCTTC	1625	False	NA	-20	True	AGTAAA	-25	NA	133738324	133663559	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_133664015_133666734_133666871_133670583_133670753_133671534_133671698_133702915_133703030_133704947_133705032_133708286_133708429_133712618_133712710_133713037_133713125_133717325_133717456_133718937_133719043_133729764_133729866_133730063_133730188_133731304_133731485_133732422_133732602_133733842_133734204_133738253
H1_mix_00087333	chr9	-	5236	27	FSM	ENSG00000160293.17	ENST00000406606.7	4691	27	-549	4	-226	-4	multi-exon	FALSE	canonical	3	143	junction_12	21.9256746099314	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGAGTGGTCAGCCTTT	8	True	NA	-6	True	AATAAA	-15	NA	133992830	133761897	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133764110_133768441_133768597_133770377_133770502_133771958_133772047_133774934_133775052_133776027_133776081_133777388_133777464_133778761_133778890_133779917_133779940_133780693_133780711_133783502_133783592_133784316_133784419_133785775_133785886_133788353_133788487_133789257_133789344_133791782_133791870_133795667_133795737_133796428_133796525_133797709_133797810_133806080_133806182_133807257_133807327_133809039_133809139_133812113_133812217_133834271_133834341_133861373_133861433_133939102_133939220_133992074
H1_mix_00087334	chr9	-	5323	28	FSM	ENSG00000160293.17	ENST00000371851.1	5101	28	-226	4	-226	-4	multi-exon	FALSE	canonical	3	38	junction_2	42.94875243912	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGAGTGGTCAGCCTTT	8	True	NA	-6	True	AATAAA	-15	NA	133992830	133761897	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133764110_133768441_133768597_133769416_133769504_133770377_133770502_133771958_133772047_133774934_133775052_133776027_133776081_133777388_133777464_133778761_133778890_133779917_133779940_133780693_133780711_133783502_133783592_133784316_133784419_133785775_133785886_133788353_133788487_133789257_133789344_133791782_133791870_133795667_133795737_133796428_133796525_133797709_133797810_133806080_133806182_133807257_133807327_133809039_133809139_133812113_133812217_133834271_133834341_133861373_133861433_133939102_133939220_133992074
H1_mix_00087336	chr9	-	5241	25	NNC	ENSG00000160293.17	novel	5101	28	NA	NA	-215	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	43.0213125477749	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGGTCAGCCTTTCGTAC	19	False	133992838	-1	True	AATAAA	-20	NA	133992819	133761892	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_133764110_133768441_133768597_133770377_133770502_133771958_133772047_133774934_133775052_133776027_133776081_133777388_133777464_133778761_133778940_133783502_133783592_133784316_133784419_133785775_133785886_133788353_133788487_133789257_133789344_133791782_133791870_133795667_133795737_133796428_133796525_133797709_133797810_133806080_133806182_133807257_133807327_133809039_133809139_133812113_133812217_133834271_133834341_133861373_133861433_133939102_133939220_133992074
H1_mix_00087337	chr9	-	5661	12	FSM	ENSG00000169925.17	ENST00000303407.12	5661	12	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_2	37.3535708627481	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTTTTTTTTTTTTGCA	-4	True	NA	37	True	AATAAA	-26	NA	134068026	134030304	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_134033706_134034700_134034830_134036031_134036325_134040033_134040270_134041759_134041952_134045292_134045422_134048082_134048455_134050373_134050589_134051561_134051710_134052305_134052444_134053264_134053591_134067944
H1_mix_00087338	chr9	-	5658	12	NNC	ENSG00000169925.17	novel	5661	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_2	56.440416911616	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTTTTTTTTTTTTGCA	-4	True	NA	37	True	AATAAA	-26	NA	134068026	134030304	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_134033706_134034700_134034827_134036031_134036325_134040033_134040270_134041759_134041952_134045292_134045422_134048082_134048455_134050373_134050589_134051561_134051710_134052305_134052444_134053264_134053591_134067944
H1_mix_00087339	chr9	-	507	2	FSM	ENSG00000169925.17	ENST00000494743.1	507	2	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGCTGTCGGGGAGCAGG	3715	False	NA	NA	False	NA	NA	NA	134050427	134048001	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_134048455_134050373
H1_mix_00087340	chr9	-	678	3	FSM	ENSG00000160345.13	ENST00000429260.7	675	3	0	-3	0	3	multi-exon	FALSE	canonical	3	195	junction_1	6.5	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTCTCGTCTGACGTTTG	1	True	NA	2	True	ATTAAA	-22	NA	135499869	135495177	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_135495616_135498584_135498664_135499708
H1_mix_00087341	chr9	-	1281	3	FSM	ENSG00000160345.13	ENST00000371789.7	1278	3	0	-3	0	3	multi-exon	FALSE	canonical	3	16	junction_1	96	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTCTCGTCTGACGTTTG	1232	False	NA	2	True	ATTAAA	-22	NA	135500518	135495177	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_135495570_135498584_135498664_135499708
H1_mix_00087343	chr9	-	8022	17	FSM	ENSG00000130559.19	ENST00000389532.9	8018	17	5	-9	5	9	multi-exon	FALSE	canonical	3	62	junction_13	29.5695683938741	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTTTTACAATTGATTG	-5	True	NA	-11	True	AATAAA	-29	NA	135907541	135808477	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_135811612_135815096_135815216_135815889_135816006_135817976_135818080_135818407_135818617_135819009_135819147_135820838_135823261_135823949_135824035_135824788_135824881_135827406_135827585_135850136_135850234_135850321_135850462_135862466_135862609_135866455_135866537_135881632_135881795_135882815_135883079_135906999
H1_mix_00087344	chr9	-	4369	6	ISM	ENSG00000130559.19	ENST00000312405.10	6054	15	63200	-1103	-631	9	3prime_fragment	FALSE	canonical	3	121	junction_5	11.7064085013295	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTTTTACAATTGATTG	NA	False	NA	-11	True	AATAAA	-29	NA	135819697	135808477	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_135811612_135815096_135815216_135815889_135816006_135817976_135818080_135818407_135818617_135819009
H1_mix_00087346	chr9	-	1861	10	FSM	ENSG00000130560.9	ENST00000371756.4	1860	10	0	-1	0	1	multi-exon	FALSE	canonical	3	507	junction_3	40.205337155687	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGTCTTCGTCTTTTCT	-18	True	NA	-6	True	AATAAA	-15	NA	135961373	135932967	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_135933516_135938221_135938361_135939672_135939760_135945027_135945251_135945888_135945998_135946268_135946372_135947797_135947906_135953679_135953754_135955294_135955416_135961024
H1_mix_00087348	chr9	-	7055	6	FSM	ENSG00000148411.8	ENST00000277554.4	6903	6	-151	-1	-151	1	multi-exon	FALSE	canonical	3	28	junction_5	8.87693640846886	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGGACTTGGCTTGGC	NA	False	NA	1	True	AATAAA	-18	NA	136095440	136006535	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136012025_136013198_136013297_136013863_136013970_136016264_136016430_136049635_136050581_136095188
H1_mix_00087350	chr9	-	1981	3	FSM	ENSG00000238227.8	ENST00000557985.2	1981	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	112.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGGAGTGATTGCTTAA	350	False	NA	-35	True	ATTAAA	-18	NA	136118534	136114588	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136114951_136115455_136117025_136118484
H1_mix_00087351	chr9	-	3033	2	FSM	ENSG00000238227.8	ENST00000418388.6	2827	2	-57	-149	-57	141	multi-exon	FALSE	canonical	3	246	junction_1	0	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTTCTCCTTATGGGAAG	NA	False	NA	NA	False	NA	NA	NA	136118932	136114439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136117025_136118484
H1_mix_00087352	chr9	-	4501	12	FSM	ENSG00000165661.17	ENST00000358701.10	4501	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	8.70166698193299	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGATTCTTTTGAAATGT	4	True	NA	NA	False	AATAAA	-22	NA	136245812	136206332	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136209276_136211263_136211453_136215153_136215305_136216599_136216723_136218678_136218809_136219029_136219165_136221795_136221942_136223762_136223854_136224006_136224113_136224860_136224910_136226773_136226875_136245475
H1_mix_00087353	chr9	-	3099	3	FSM	ENSG00000213221.5	ENST00000371738.4	3096	3	0	-3	0	0	multi-exon	FALSE	canonical	3	482	junction_2	22	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGGGGGGCGCTACGTCC	-16	True	NA	NA	False	AATAAA	-21	NA	136363744	136359479	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136362181_136362988_136363129_136363486
H1_mix_00087354	chr9	-	5018	23	FSM	ENSG00000165684.6	ENST00000298532.2	5010	23	0	-8	0	-2	multi-exon	TRUE	canonical	3	42	junction_11	20.6653780812176	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCTGTTGTGGTTTTGTT	4817	False	NA	-1	True	AATAAA	-29	NA	136398797	136375568	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136375801_136376348_136376482_136377542_136379300_136379836_136379865_136380739_136380851_136381321_136381393_136381823_136382074_136382252_136382337_136383185_136383669_136383952_136384033_136384719_136384815_136387484_136387580_136387741_136387849_136388443_136388592_136391941_136392107_136392521_136392595_136392672_136392778_136394248_136394331_136394799_136394879_136395297_136395424_136395602_136395771_136396976_136397024_136398298
H1_mix_00087355	chr9	-	4676	24	NNC	ENSG00000165684.6	novel	4693	24	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	26.3135808445374	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGGCTGTTGTGGTTTTG	3456	False	NA	-3	True	AATAAA	-27	NA	136400158	136375570	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_136375801_136376348_136376482_136377542_136379300_136379836_136379865_136380739_136380851_136381321_136381393_136381823_136382074_136382252_136382337_136383185_136383669_136383952_136384033_136384719_136384815_136387484_136387580_136387741_136387849_136388443_136388587_136391941_136392107_136392521_136392595_136392672_136392778_136394248_136394331_136394799_136394879_136395297_136395424_136395602_136395771_136396976_136397024_136398298_136398438_136400133
H1_mix_00087356	chr9	-	4693	24	FSM	ENSG00000165684.6	ENST00000684778.1	4693	24	2	-2	2	-2	multi-exon	FALSE	canonical	3	42	junction_11	21.4221234335151	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCTGTTGTGGTTTTGTT	3	True	NA	-1	True	AATAAA	-29	NA	136400168	136375568	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136375801_136376348_136376482_136377542_136379300_136379836_136379865_136380739_136380851_136381321_136381393_136381823_136382074_136382252_136382337_136383185_136383669_136383952_136384033_136384719_136384815_136387484_136387580_136387741_136387849_136388443_136388592_136391941_136392107_136392521_136392595_136392672_136392778_136394248_136394331_136394799_136394879_136395297_136395424_136395602_136395771_136396976_136397024_136398298_136398438_136400133
H1_mix_00087358	chr9	-	2370	8	ISM	ENSG00000165689.17	ENST00000298537.11	2314	9	44	-12	28	9	intron_retention	FALSE	canonical	3	122	junction_7	95.5027513226927	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCTGACTTAGCCAGTC	8	True	NA	-1	True	AATAAA	-27	NA	136410565	136401912	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_136402888_136404054_136404195_136404630_136404694_136405090_136405203_136405904_136405979_136407144_136407562_136407825_136407939_136410089
H1_mix_00087359	chr9	-	2326	9	FSM	ENSG00000165689.17	ENST00000298537.11	2314	9	0	-12	0	9	multi-exon	FALSE	canonical	3	116	junction_8	118.131282901694	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCTGACTTAGCCAGTC	4	True	NA	-1	True	AATAAA	-27	NA	136410609	136401912	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136402888_136404054_136404195_136404630_136404694_136405090_136405203_136405904_136405979_136407144_136407562_136407825_136407939_136410089_136410240_136410327
H1_mix_00087360	chr9	-	2400	10	FSM	ENSG00000165689.17	ENST00000357365.8	2391	10	0	-9	0	9	multi-exon	FALSE	canonical	3	69	junction_8	136.020423303104	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCTGACTTAGCCAGTC	-1	True	NA	-1	True	AATAAA	-27	NA	136410614	136401912	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136402888_136404054_136404195_136404630_136404694_136405090_136405203_136405904_136405979_136407144_136407562_136407825_136407939_136408998_136409068_136410089_136410240_136410327
H1_mix_00087361	chr9	-	2213	9	NIC	ENSG00000165689.17	novel	2391	10	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_8	133.473721664603	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCTTCTCTGCTGACT	-13	True	NA	-10	True	AATAAA	-18	NA	136410586	136401921	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_136402888_136404054_136404195_136404630_136404694_136405090_136405203_136405904_136405979_136407144_136407562_136407825_136407939_136408998_136409068_136410327
H1_mix_00087362	chr9	-	2129	8	FSM	ENSG00000165689.17	ENST00000371725.7	2129	8	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_7	96.5249254052537	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTAATAAATTCTGTAG	13	True	NA	-39	True	TTTAAA	-36	NA	136410600	136401950	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136402888_136404054_136404195_136404630_136404694_136405090_136405203_136405904_136405979_136407144_136407562_136407825_136407939_136410327
H1_mix_00087363	chr9	-	869	4	FSM	ENSG00000165689.17	ENST00000461693.5	869	4	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_3	31.0304509939654	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAATGTTTTCCAGTCCCA	5789	False	NA	-24	True	CATAAA	-35	NA	136405348	136402479	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136402888_136404054_136404195_136404630_136404694_136405090
H1_mix_00087364	chr9	-	513	3	FSM	ENSG00000165689.17	ENST00000466579.1	496	3	0	-17	0	0	multi-exon	FALSE	canonical	3	393	junction_2	19.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCCAGTGTCGTGCCCTC	6357	False	NA	-8	True	AGTAAA	-14	NA	136404780	136402664	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136402888_136404054_136404195_136404630
H1_mix_00087367	chr9	-	3417	10	FSM	ENSG00000148384.14	ENST00000371712.4	3417	10	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_5	13.5409757658508	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTTCTGGCCAAAGACT	-23	True	NA	-13	True	AATAAA	-22	NA	136439845	136428618	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136429808_136430276_136430414_136431001_136431118_136431823_136431986_136432478_136432587_136432955_136433076_136433154_136433280_136434036_136434135_136434739_136434864_136438607
H1_mix_00087370	chr9	-	8810	30	FSM	ENSG00000148396.19	ENST00000313050.11	8806	30	0	-4	0	3	multi-exon	FALSE	canonical	3	61	junction_3	40.7097846176413	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTCCCTTTGGTTTGCT	7069	False	NA	3	True	AATAAA	-32	NA	136477689	136440092	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136441824_136443822_136443901_136445051_136445112_136445644_136445720_136446854_136446950_136447226_136447365_136447568_136447681_136447852_136447910_136448083_136448162_136451255_136451409_136453427_136453511_136454108_136454328_136455600_136455794_136456052_136456167_136457443_136457585_136459133_136459240_136459443_136459556_136459756_136459875_136460041_136460124_136461176_136461275_136462886_136463133_136463462_136463602_136463678_136463741_136464419_136464563_136465961_136466137_136466263_136466463_136466956_136467084_136468414_136468513_136471974_136472112_136474048
H1_mix_00087371	chr9	-	8966	31	NIC	ENSG00000148396.19	novel	9018	32	NA	NA	8	3	intron_retention	FALSE	canonical	3	43	junction_5	47.2285224555388	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTCCCTTTGGTTTGCT	15	True	NA	3	True	AATAAA	-32	NA	136483032	136440092	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_136441824_136443822_136443901_136445051_136445112_136445644_136445720_136446854_136447016_136447226_136447365_136447568_136447681_136447852_136447910_136448083_136448162_136451255_136451409_136453427_136453511_136454108_136454328_136455600_136455794_136456052_136456167_136457443_136457585_136459133_136459240_136459443_136459556_136459756_136459875_136460041_136460124_136461176_136461275_136462886_136463133_136463462_136463602_136463678_136463741_136464419_136464563_136465961_136466137_136466263_136466463_136466956_136467084_136468414_136468513_136471974_136472112_136474048_136477685_136482937
H1_mix_00087372	chr9	-	8045	30	NIC	ENSG00000148396.19	novel	6551	31	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_28	44.339920359146	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGGTTCCCTTTGGTTT	21	True	NA	0	True	AATAAA	-29	NA	136483026	136440095	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_136441824_136443822_136443901_136446854_136446950_136447226_136447365_136447568_136447681_136447852_136447910_136448083_136448162_136451255_136451409_136453427_136453511_136454108_136454328_136455600_136455794_136456052_136456167_136457443_136457585_136459133_136459240_136459443_136459556_136459756_136459875_136460041_136460124_136461176_136461275_136462886_136463133_136463462_136463602_136463678_136463741_136464419_136464563_136465961_136466137_136466263_136466463_136466956_136467084_136468414_136468513_136471974_136472112_136474048_136474487_136475197_136477685_136482937
H1_mix_00087373	chr9	-	8800	29	NIC	ENSG00000148396.19	novel	6551	31	NA	NA	-27	3	intron_retention	FALSE	canonical	3	84	junction_2	34.7588448588034	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTCCCTTTGGTTTGCT	-20	True	NA	3	True	AATAAA	-32	NA	136483067	136440092	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_136441824_136443822_136443901_136446854_136446950_136447226_136447365_136447568_136447681_136447852_136447910_136448083_136448162_136451255_136451409_136453427_136453511_136454108_136454328_136455600_136455794_136456052_136456167_136457443_136457585_136459133_136459240_136459443_136459556_136459756_136459875_136460041_136460124_136461176_136461275_136462886_136463133_136463462_136463602_136463678_136463741_136464419_136464563_136465961_136466137_136466263_136466463_136466956_136467084_136468414_136468513_136471974_136472112_136474048_136477685_136482937
H1_mix_00087374	chr9	-	8863	30	NIC	ENSG00000148396.19	novel	9018	32	NA	NA	-27	0	intron_retention	FALSE	canonical	3	112	junction_2	32.1226839664447	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCTTCACCTGTGGTTCC	-20	True	NA	-9	True	AATAAA	-20	NA	136483067	136440104	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_136441824_136443822_136443901_136445644_136445720_136446854_136446950_136447226_136447365_136447568_136447681_136447852_136447910_136448083_136448162_136451255_136451409_136453427_136453511_136454108_136454328_136455600_136455794_136456052_136456167_136457443_136457585_136459133_136459240_136459443_136459556_136459756_136459875_136460041_136460124_136461176_136461275_136462886_136463133_136463462_136463602_136463678_136463741_136464419_136464563_136465961_136466137_136466263_136466463_136466956_136467084_136468414_136468513_136471974_136472112_136474048_136477685_136482937
H1_mix_00087375	chr9	-	8986	29	FSM	ENSG00000148396.19	ENST00000290037.10	8982	29	0	-4	0	3	multi-exon	FALSE	canonical	2	10	junction_28	53.8685569564605	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTCCCTTTGGTTTGCT	25	True	NA	3	True	AATAAA	-32	NA	136483759	136440092	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136441824_136443822_136443901_136446854_136447016_136447226_136447365_136447568_136447681_136447852_136447910_136448083_136448162_136451255_136451409_136453427_136453511_136454108_136454328_136455600_136455794_136456052_136456167_136457443_136457585_136459133_136459240_136459443_136459556_136459756_136459875_136460041_136460124_136461176_136461275_136462886_136463133_136463462_136463602_136463678_136463741_136464419_136464563_136465961_136466137_136466263_136466463_136466956_136467084_136468414_136468513_136471974_136472112_136474048_136477685_136483509
H1_mix_00087377	chr9	-	9569	34	FSM	ENSG00000148400.13	ENST00000651671.1	9568	34	3	-4	3	4	multi-exon	FALSE	canonical	3	31	junction_32	24.8290389542219	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGCTCTGGCCTTTGGC	1	True	NA	-6	True	AATAAA	-33	NA	136546045	136494428	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136497559_136498898_136498997_136499111_136499260_136500551_136500848_136501747_136501914_136502000_136502089_136502271_136502489_136503181_136503331_136504672_136505105_136505309_136505882_136506526_136506640_136506715_136506974_136507304_136507438_136507954_136508140_136508231_136508386_136508869_136509072_136509732_136509962_136510652_136510806_136511151_136511272_136513020_136513135_136513391_136513538_136514509_136514703_136515289_136515401_136515482_136515717_136515980_136516095_136517271_136517386_136517751_136517938_136518136_136518293_136518590_136518825_136519442_136519566_136522849_136523189_136523716_136523980_136544023_136544103_136545725
H1_mix_00087378	chr9	-	9449	34	FSM	ENSG00000148400.13	ENST00000680218.1	9448	34	3	-4	3	4	multi-exon	FALSE	canonical	1	1	junction_11	26.8994659281115	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGCTCTGGCCTTTGGC	1	True	NA	-6	True	AATAAA	-33	NA	136546045	136494428	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136497559_136498898_136498997_136499111_136499260_136500551_136500848_136501747_136501914_136502000_136502089_136502271_136502489_136503181_136503331_136504672_136505105_136505309_136505882_136506526_136506640_136506835_136506974_136507304_136507438_136507954_136508140_136508231_136508386_136508869_136509072_136509732_136509962_136510652_136510806_136511151_136511272_136513020_136513135_136513391_136513538_136514509_136514703_136515289_136515401_136515482_136515717_136515980_136516095_136517271_136517386_136517751_136517938_136518136_136518293_136518590_136518825_136519442_136519566_136522849_136523189_136523716_136523980_136544023_136544103_136545725
H1_mix_00087380	chr9	-	1549	6	FSM	ENSG00000169692.13	ENST00000371696.7	1546	6	0	-3	0	3	multi-exon	FALSE	canonical	2	364	junction_5	41.725771412881	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCTGTGGTCACTCACAG	-4	True	NA	-2	True	TATAAA	-22	NA	136687457	136673139	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136673928_136674734_136674808_136676584_136676681_136676960_136677137_136677422_136677557_136687175
H1_mix_00087381	chr9	-	1525	5	FSM	ENSG00000169692.13	ENST00000371694.7	1391	5	-131	-3	-72	3	multi-exon	FALSE	canonical	2	33	junction_2	180.06179494829	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCTGTGGTCACTCACAG	NA	False	NA	-2	True	TATAAA	-22	NA	136687529	136673139	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136673928_136674734_136674808_136676960_136677137_136677422_136677557_136687175
H1_mix_00087382	chr9	-	1215	3	FSM	ENSG00000233016.8	ENST00000436596.2	1215	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	87.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATATCTGTTTTCTTACT	1296	False	NA	-23	True	TTTAAA	-7	NA	136726886	136724356	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136724940_136725054_136725111_136726310
H1_mix_00087383	chr9	-	1610	2	FSM	ENSG00000233016.8	ENST00000663097.1	1610	2	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTACATCTCATGGCTG	966	False	NA	-73	True	GGGGCT	-40	NA	136727216	136724406	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136725111_136726310
H1_mix_00087384	chr9	-	1123	4	FSM	ENSG00000233016.8	ENST00000653276.1	1123	4	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	4.71404520791032	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGGGCTGTTTCCTAG	4	True	NA	-99	True	GGGGCT	-14	NA	136728178	136724432	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136725111_136726310_136726417_136727045_136727087_136727880
H1_mix_00087385	chr9	-	1254	3	FSM	ENSG00000233016.8	ENST00000668354.1	1254	3	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTCTTTAAGGATAATAT	277	False	NA	-18	True	ATTAAA	-14	NA	136727905	136724657	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136725111_136726310_136727087_136727880
H1_mix_00087386	chr9	-	789	5	FSM	ENSG00000233016.8	ENST00000416970.5	789	5	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	77.3284391411077	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTCTTTAAGGATAATAT	-2	True	NA	-18	True	ATTAAA	-14	NA	136728184	136724657	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136724940_136725054_136725111_136726310_136726417_136727045_136727087_136727880
H1_mix_00087387	chr9	-	1627	3	ISM	ENSG00000187922.14	ENST00000341040.11	1780	4	919	0	-17	0	3prime_fragment	FALSE	canonical	3	6	junction_2	0.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGAGCCCGGGCAACAT	-16	True	NA	NA	False	AATAAA	-24	NA	136742021	136738166	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_136739554_136739949_136740049_136741880
H1_mix_00087388	chr9	-	813	5	FSM	ENSG00000107223.13	ENST00000371649.5	790	5	-23	0	0	0	multi-exon	FALSE	canonical	3	457	junction_1	886.712291276037	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTTCTGCTGGCTGTTT	-3	True	NA	-15	True	NA	NA	NA	136866308	136862118	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136862497_136862905_136863000_136863287_136863449_136863819_136863872_136866180
H1_mix_00087389	chr9	-	663	5	FSM	ENSG00000107223.13	ENST00000224073.6	662	5	0	-1	0	1	multi-exon	FALSE	canonical	3	2059	junction_1	198.308314248294	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTTCTGCTGGCTGTTTT	-3	True	NA	-14	True	NA	NA	NA	136866308	136862117	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136862346_136862905_136863000_136863287_136863449_136863819_136863872_136866180
H1_mix_00087391	chr9	-	2392	8	FSM	ENSG00000159069.14	ENST00000483559.5	2392	8	0	0	0	0	multi-exon	FALSE	canonical	3	514	junction_7	74.2172761668916	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTGTCCAGTCTCTGT	5411	False	136944705	-1	True	AATAAA	-16	NA	136944688	136940434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136941172_136941250_136941464_136941536_136941685_136942045_136942696_136942768_136942944_136943348_136943507_136943890_136944107_136944593
H1_mix_00087392	chr9	-	2339	8	FSM	ENSG00000159069.14	ENST00000459905.5	2339	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	223.932387755131	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTGTCCAGTCTCTGT	9	True	NA	-1	True	AATAAA	-16	NA	136944696	136940434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136941172_136941250_136941464_136941536_136941685_136942099_136942467_136942546_136942944_136943348_136943507_136943890_136944107_136944593
H1_mix_00087393	chr9	-	2362	9	FSM	ENSG00000159069.14	ENST00000325285.8	2362	9	0	0	0	0	multi-exon	FALSE	canonical	3	514	junction_8	72.455913319756	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTGTCCAGTCTCTGT	1	True	NA	-1	True	AATAAA	-16	NA	136944738	136940434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136941172_136941250_136941464_136941536_136941685_136942045_136942467_136942546_136942696_136942768_136942944_136943348_136943507_136943890_136944107_136944593
H1_mix_00087399	chr9	-	8097	48	FSM	ENSG00000107331.18	ENST00000371605.7	8151	48	56	-2	5	2	multi-exon	TRUE	canonical	3	13	junction_27	7.48887812752169	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGGTCTGCGTGTGTGGGTT	0	True	NA	-6	True	AATAAA	-16	NA	137028232	137007231	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137007965_137008415_137008623_137008730_137008869_137008950_137009054_137009369_137009463_137009540_137009645_137009768_137009904_137009982_137010125_137010192_137010372_137010619_137010738_137010972_137011106_137011185_137011310_137011406_137011555_137011633_137011750_137011843_137012019_137012101_137012163_137012264_137012377_137012484_137012591_137012711_137012926_137013001_137013319_137013460_137013564_137013831_137014039_137014167_137014405_137014689_137014811_137014912_137015098_137015413_137015597_137015674_137015872_137015961_137016175_137016290_137016472_137016573_137016739_137016919_137017125_137017195_137017347_137017501_137017693_137017786_137017902_137017972_137018076_137018177_137018352_137018718_137018816_137018902_137019071_137019177_137019307_137020335_137020496_137020693_137021062_137021391_137021611_137021890_137022002_137022350_137022479_137022701_137022866_137022940_137023053_137024142_137024237_137028074
H1_mix_00087400	chr9	-	1475	9	FSM	ENSG00000107281.10	ENST00000371601.5	1475	9	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_8	36.0277670693036	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGCCTGTGTTGCCAGC	18	True	NA	-34	True	ATTAAA	-20	NA	137046177	137039462	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137039865_137039970_137040068_137040356_137040437_137040513_137040599_137040670_137040738_137040813_137040985_137041061_137041188_137042926_137043074_137045877
H1_mix_00087401	chr9	-	4363	8	FSM	ENSG00000107281.10	ENST00000371600.7	2187	8	-2176	0	-89	0	multi-exon	FALSE	canonical	3	233	junction_3	19.6375317456452	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCGGCTTCTGCCTGTGT	7784	False	NA	-41	True	ATTAAA	-13	NA	137046268	137039469	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137039865_137039970_137040068_137040356_137040437_137040513_137040599_137040670_137040738_137040813_137040985_137041061_137041188_137042926
H1_mix_00087405	chr9	-	3818	6	FSM	ENSG00000186193.9	ENST00000409687.5	3814	6	0	-4	0	4	multi-exon	FALSE	canonical	3	100	junction_5	13.6	228	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGGTATTTATAGTTCCT	5	True	NA	NA	False	AATAAA	-26	NA	137070557	137062122	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137064788_137064862_137064980_137065077_137065186_137065521_137065669_137066261_137066375_137069889
H1_mix_00087406	chr9	-	1863	1	FSM	ENSG00000268996.3	ENST00000596585.3	1872	1	89	-80	89	80	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGAAACCTTGGCATCTC	-32	True	NA	78	True	NA	NA	NA	137086728	137084865	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137084900_137086700
H1_mix_00087407	chr9	-	478	4	FSM	ENSG00000176978.14	ENST00000470766.5	478	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	75.2167239086864	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTATGTCCCGTCCTTCC	6104	False	NA	-6	True	AATAAA	-17	NA	137112215	137110545	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137110784_137110879_137110951_137111689_137111755_137112111
H1_mix_00087408	chr9	-	1607	13	FSM	ENSG00000176978.14	ENST00000371579.7	1601	13	0	-6	0	6	multi-exon	FALSE	canonical	3	105	junction_5	20.7337620534453	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCCGTCCTTCCTGTCTG	-16	True	NA	0	True	AATAAA	-23	NA	137114733	137110539	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137110784_137110879_137110951_137111689_137111755_137111872_137112030_137112111_137112231_137112744_137112806_137112952_137113120_137113205_137113288_137113360_137113497_137113864_137114029_137114242_137114383_137114462_137114577_137114646
H1_mix_00087412	chr9	-	817	5	FSM	ENSG00000176978.14	ENST00000497375.1	817	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	71.239034243875	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGACGTCACGGCGGTGAGT	13	True	NA	NA	False	NA	NA	NA	137114704	137113374	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137113716_137113864_137114029_137114242_137114383_137114462_137114577_137114646
H1_mix_00087413	chr9	-	1164	2	FSM	ENSG00000184709.7	ENST00000371542.3	1209	2	45	0	45	0	multi-exon	FALSE	canonical	3	23	junction_1	0	579	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGTGACATTCCTTTAGG	2050	False	NA	0	True	NA	NA	NA	137170006	137168757	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137169186_137169270
H1_mix_00087414	chr9	-	3921	3	FSM	ENSG00000176248.9	ENST00000487917.1	1972	3	-1949	0	1456	0	multi-exon	FALSE	canonical	3	89	junction_1	6	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTGTCCTGGTGGCTT	9590	False	NA	-1	True	ATTAAA	-16	NA	137179021	137174783	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137175155_137175236_137175473_137175707
H1_mix_00087415	chr9	-	2655	13	FSM	ENSG00000176248.9	ENST00000323927.3	2655	13	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_5	13.0647426304539	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTGTCCTGGTGGCTT	2	True	NA	-1	True	ATTAAA	-16	NA	137188560	137174783	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137175155_137175236_137175473_137175707_137175838_137180180_137180385_137180451_137180528_137180787_137180930_137181680_137181863_137183124_137183243_137183671_137183792_137184912_137185088_137186223_137186357_137187480_137188104_137188415
H1_mix_00087419	chr9	-	2661	4	FSM	ENSG00000176058.13	ENST00000409012.6	2659	4	0	-2	0	0	multi-exon	FALSE	canonical	3	97	junction_3	16.779617264871	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGTCCCCACTGCGTG	4	True	NA	-9	True	AATAAA	-18	NA	137200741	137191616	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137192175_137192258_137192366_137192450_137192692_137198986
H1_mix_00087420	chr9	-	1587	1	FSM	ENSG00000187713.7	ENST00000343666.6	1567	1	-24	4	-24	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGAATAGTGGTTGCCT	-26	True	NA	NA	False	AATAAA	-19	NA	137205672	137204085	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137204100_137205700
H1_mix_00087421	chr9	-	1484	1	Genic_Genomic	ENSG00000212864.4	novel	NA	NA	NA	NA	-157	4	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTGTTCCTGGACTGAA	4982	False	NA	-9	True	ATTAAA	-18	NA	137221738	137220254	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_-_137220300_137221700
H1_mix_00087423	chr9	-	2662	1	FSM	ENSG00000198435.4	ENST00000356628.4	2641	1	-32	11	-32	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCTTGGTCCTTCTTGGC	5556	False	NA	NA	False	AATAAA	-32	NA	137302303	137299641	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137299600_137302300
H1_mix_00087424	chr9	-	964	8	FSM	ENSG00000187609.16	ENST00000479452.5	962	8	0	-2	0	2	multi-exon	FALSE	canonical	3	38	junction_1	7.21958786771044	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTGTGACGTCTGTCAG	27	True	NA	-1	True	AATAAA	-16	NA	137423155	137366142	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137366362_137366492_137366633_137367935_137367990_137372904_137373073_137373425_137373600_137383312_137383378_137395302_137395405_137423113
H1_mix_00087425	chr9	-	2475	6	NIC	ENSG00000187609.16	novel	1132	7	NA	NA	-21	2	intron_retention	FALSE	canonical	3	50	junction_5	4.40908153700972	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTGTGACGTCTGTCAG	-2	True	NA	-1	True	AATAAA	-16	NA	137423232	137366142	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_137367990_137372904_137373073_137373425_137373600_137383312_137383378_137395302_137395405_137423113
H1_mix_00087426	chr9	-	1663	3	FSM	ENSG00000187609.16	ENST00000465160.2	1585	3	-77	-1	-28	1	multi-exon	FALSE	canonical	2	6	junction_1	22	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCGCAGTTGAGGTCAGA	NA	False	NA	-17	True	AATAAA	-22	NA	137423239	137391800	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137393236_137395302_137395405_137423113
H1_mix_00087427	chr9	-	3571	14	FSM	ENSG00000165802.23	ENST00000371474.7	3571	14	0	0	0	0	multi-exon	TRUE	canonical	3	80	junction_10	132.640413486768	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCCTGTAGACTCTGTG	-15	True	NA	-11	True	TATAAA	-17	NA	137459334	137447572	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137449492_137449598_137449675_137449922_137450026_137450175_137450256_137452364_137452436_137452552_137452587_137452735_137452820_137453055_137453181_137453730_137453821_137454390_137454444_137456410_137456487_137457406_137457902_137458487_137458550_137459031
H1_mix_00087428	chr9	-	3640	15	FSM	ENSG00000165802.23	ENST00000265663.12	2981	15	0	-659	0	0	multi-exon	FALSE	canonical	3	376	junction_11	69.4291593155592	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCCTGTAGACTCTGTG	-15	True	NA	-11	True	TATAAA	-17	NA	137459334	137447572	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137449492_137449598_137449675_137449922_137450026_137450175_137450256_137452364_137452436_137452552_137452587_137452735_137452820_137453055_137453181_137453730_137453821_137454390_137454444_137455238_137455308_137456410_137456487_137457406_137457902_137458487_137458550_137459031
H1_mix_00087430	chr9	-	672	4	FSM	ENSG00000165802.23	ENST00000371468.1	672	4	0	0	0	0	multi-exon	FALSE	canonical	3	518	junction_3	16.7531091641721	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCAGCACTCACACCCGCT	4861	False	NA	NA	False	GGGGCT	-11	NA	137454492	137452464	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137452820_137453055_137453181_137453730_137453821_137454390
H1_mix_00087431	chr9	-	2297	9	FSM	ENSG00000148399.13	ENST00000277540.7	2302	9	0	5	0	-5	multi-exon	FALSE	canonical	3	123	junction_7	46.0970443737991	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATTGAGGACAACCAGT	-30	True	NA	NA	False	AATAAA	-14	NA	137578925	137554448	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137555649_137564433_137564607_137564892_137564959_137565084_137565155_137574207_137574381_137574751_137574844_137576079_137576168_137577469_137577604_137578624
H1_mix_00087433	chr9	-	1716	8	NIC	ENSG00000148399.13	novel	2302	9	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_2	75.4412868070398	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGAGTTTATAACATGTTT	30	True	NA	-13	True	ATTAAA	-18	NA	137578865	137554903	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_137555649_137564433_137564607_137565084_137565155_137574207_137574381_137574751_137574844_137576079_137576168_137577469_137577604_137578624
H1_mix_00087434	chr9	-	1886	10	NIC	ENSG00000148399.13	novel	2302	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_8	62.9569713924803	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGAGTTTATAACATGTTT	20	True	NA	-13	True	ATTAAA	-18	NA	137578875	137554903	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_137555649_137564433_137564607_137564892_137564959_137565084_137565155_137574207_137574381_137574751_137574844_137576079_137576168_137576308_137576403_137577469_137577604_137578624
H1_mix_00087435	chr9	-	1752	9	NIC	ENSG00000148399.13	novel	2302	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_8	81.8259394996477	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGAGTTTATAACATGTTT	20	True	NA	-13	True	ATTAAA	-18	NA	137578875	137554903	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_137555649_137564433_137564607_137564892_137564959_137565084_137565155_137574207_137574381_137574751_137574844_137576079_137576168_137576308_137576403_137578624
H1_mix_00087436	chr9	-	2293	10	NIC	ENSG00000148399.13	novel	1414	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	25	junction_6	86.6886012128868	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGAGTTTATAACATGTTT	-13	True	NA	-13	True	ATTAAA	-18	NA	137578908	137554903	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_137555649_137564433_137564607_137564892_137564959_137565084_137565155_137574207_137574381_137574751_137574847_137575708_137576168_137576308_137576403_137577469_137577604_137578624
H1_mix_00087441	chr9	-	1411	6	FSM	ENSG00000165724.6	ENST00000298585.3	1395	6	0	-16	0	16	multi-exon	FALSE	canonical	3	587	junction_5	39.5049364004044	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTGCTCCGCCTCCCTC	-7	True	NA	-7	True	AGTAAA	-29	NA	137590512	137582064	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137582687_137582982_137583164_137586966_137587108_137587716_137587824_137588658_137588719_137590212
H1_mix_00087442	chr9	-	1259	2	FSM	ENSG00000165724.6	ENST00000471957.1	1259	2	0	0	0	0	multi-exon	FALSE	canonical	3	662	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGGGCTGGCGGCCCAAG	4763	False	NA	NA	False	NA	NA	NA	137589106	137587012	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137587824_137588658
H1_mix_00087443	chr9	-	1409	3	FSM	ENSG00000203993.7	ENST00000371417.4	1480	3	65	6	18	0	multi-exon	FALSE	canonical	2	112	junction_2	26	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCTCCAGGTCCCAG	19	True	NA	0	True	AATAAA	-18	NA	137618813	137615331	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137616200_137617933_137618192_137618530
H1_mix_00087444	chr9	-	1808	2	FSM	ENSG00000203993.7	ENST00000496793.3	1841	2	33	0	5	0	multi-exon	FALSE	canonical	3	164	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCTCCAGGTCCCAG	-41	True	NA	0	True	AATAAA	-18	NA	137618873	137615331	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137616200_137617933
H1_mix_00087445	chr9	-	2252	2	FSM	ENSG00000203993.7	ENST00000663398.2	2288	2	36	0	11	0	multi-exon	FALSE	canonical	2	112	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTTTTTTTTTTTTTTT	12	True	NA	NA	False	NA	NA	NA	137618820	137616229	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137618192_137618530
H1_mix_00087446	chr9	-	269	1	FSM	ENSG00000274841.1	ENST00000615730.1	281	1	67	-55	67	55	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAGAATGACCAAGAAAAAG	NA	False	NA	NA	False	AAAAAG	-42	NA	137638341	137638072	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137638100_137638300
H1_mix_00087447	chr9	+	4490	1	Intergenic	novelGene_1517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	2751557	2756047	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_2751600_2756000
H1_mix_00087448	chr9	+	2020	1	Intergenic	novelGene_1519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAACCACCAAACAATA	NA	False	NA	NA	False	NA	NA	NA	3327408	3329428	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_3327400_3329400
H1_mix_00087449	chr9	+	3261	1	Intergenic	novelGene_1520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAACAATGAAAGAAAAACAG	NA	False	NA	NA	False	TATAAA	-17	NA	3466455	3469716	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_3466500_3469700
H1_mix_00087450	chr9	+	4446	1	Intergenic	novelGene_1521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTTGCCTCTTGATGCC	1288	False	NA	NA	False	AATAAA	-21	NA	3528276	3532722	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_3528300_3532700
H1_mix_00087451	chr9	+	434	1	Intergenic	novelGene_1524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTATACACTTGTAATTT	6826	False	NA	NA	False	NA	NA	NA	6727660	6728094	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_6727700_6728100
H1_mix_00087452	chr9	+	237	1	Intergenic	novelGene_1527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2718	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCGCTTTCCTGGGGCAG	323	False	NA	NA	False	NA	NA	NA	12949046	12949283	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_12949000_12949300
H1_mix_00087453	chr9	+	267	1	Intergenic	novelGene_1528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTCGTAAAATAGGCAAAC	792	False	NA	NA	False	NA	NA	NA	12949515	12949782	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_12949500_12949800
H1_mix_00087454	chr9	+	250	1	Intergenic	novelGene_1529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGTAAAATAATAGAAAAAAG	1473	False	NA	NA	False	NA	NA	NA	12950196	12950446	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_12950200_12950400
H1_mix_00087455	chr9	+	238	1	Intergenic	novelGene_1530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCTCCTTTGCGTCCTC	2228	False	NA	NA	False	NA	NA	NA	12950951	12951189	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_12951000_12951200
H1_mix_00087456	chr9	+	501	1	Intergenic	novelGene_1531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACATAATTCCTCAGTTTA	3475	False	NA	NA	False	NA	NA	NA	12952198	12952699	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_12952200_12952700
H1_mix_00087457	chr9	+	224	1	Intergenic	novelGene_1532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAAACATCATCCATTCT	4595	False	NA	NA	False	NA	NA	NA	12953318	12953542	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_12953300_12953500
H1_mix_00087458	chr9	+	402	1	Intergenic	novelGene_1535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAACTAATAAAAACATCT	NA	False	NA	NA	False	AAAACA	-13	NA	16779868	16780270	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_16779900_16780300
H1_mix_00087459	chr9	+	1015	1	Intergenic	novelGene_1536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	815	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTGTTTTGGTTACTGT	NA	False	NA	NA	False	NA	NA	NA	17199203	17200218	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_17199200_17200200
H1_mix_00087460	chr9	+	501	1	Intergenic	novelGene_1539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	185	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCATCCTATCAAACTAAA	NA	False	NA	NA	False	NA	NA	NA	23686242	23686743	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_23686200_23686700
H1_mix_00087462	chr9	+	259	1	Intergenic	novelGene_1548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTGCTTTCCTGCAGGA	NA	False	NA	NA	False	NA	NA	NA	37635425	37635684	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_37635400_37635700
H1_mix_00087463	chr9	+	3476	1	Intergenic	novelGene_1550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTATTTTCCTATTGGA	NA	False	NA	NA	False	GATAAA	-24	NA	37881892	37885368	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_37881900_37885400
H1_mix_00087464	chr9	+	324	1	Intergenic	novelGene_1552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATATTTATTTTCACAC	NA	False	NA	NA	False	NA	NA	NA	41211889	41212213	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_41211900_41212200
H1_mix_00087465	chr9	+	287	1	Intergenic	novelGene_1557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATAAATAAATAAATATT	NA	False	NA	NA	False	NA	NA	NA	65653174	65653461	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_65653200_65653500
H1_mix_00087466	chr9	+	1947	1	Intergenic	novelGene_1559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTAGCTGGGCGTGGTGGC	NA	False	NA	NA	False	ACTAAA	-29	NA	70784386	70786333	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_70784400_70786300
H1_mix_00087467	chr9	+	236	1	Intergenic	novelGene_1563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTAACTAAATTATCTGC	NA	False	NA	NA	False	NA	NA	NA	78183341	78183577	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_78183300_78183600
H1_mix_00087468	chr9	+	216	1	Intergenic	novelGene_1564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	441	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTATCTCCCTTCAGACTC	NA	False	NA	NA	False	TATAAA	-11	NA	80137410	80137626	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_80137400_80137600
H1_mix_00087469	chr9	+	489	1	Intergenic	novelGene_1567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTATGCTCAACTCACTT	NA	False	NA	NA	False	NA	NA	NA	80140616	80141105	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_80140600_80141100
H1_mix_00087471	chr9	+	229	1	Intergenic	novelGene_1568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCCCGTAGCGTTTCTGT	2963	False	NA	NA	False	NA	NA	NA	82887097	82887326	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_82887100_82887300
H1_mix_00087473	chr9	+	222	1	Intergenic	novelGene_1577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCGATCATGCACCCCTT	NA	False	NA	NA	False	NA	NA	NA	90415274	90415496	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_90415300_90415500
H1_mix_00087474	chr9	+	862	1	Intergenic	novelGene_1578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTCGGAATGCTACAGG	NA	False	NA	NA	False	NA	NA	NA	90416326	90417188	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_90416300_90417200
H1_mix_00087475	chr9	+	332	1	Intergenic	novelGene_1584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTCATTTCTTCTCTTC	NA	False	NA	NA	False	AGTAAA	-31	NA	94543806	94544138	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_94543800_94544100
H1_mix_00087477	chr9	+	2898	1	Intergenic	novelGene_1586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCACTGAGGGTGCACC	NA	False	NA	NA	False	NA	NA	NA	97129755	97132653	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_97129800_97132700
H1_mix_00087478	chr9	+	216	1	Intergenic	novelGene_1588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAACCATTCATTTGTT	NA	False	NA	NA	False	NA	NA	NA	97964599	97964815	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_97964600_97964800
H1_mix_00087479	chr9	+	601	1	Intergenic	novelGene_1591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTCCGTGCTCAACACC	NA	False	NA	NA	False	ACTAAA	-11	NA	103204368	103204969	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_103204400_103205000
H1_mix_00087481	chr9	+	235	1	Intergenic	novelGene_1593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGTAAATCCCAGGGCTT	NA	False	NA	-90	True	NA	NA	NA	103206215	103206450	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_103206200_103206400
H1_mix_00087482	chr9	+	261	1	Intergenic	novelGene_1594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAATAATGATAATAAACAT	NA	False	NA	NA	False	AATAAA	-26	NA	107117654	107117915	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_107117700_107117900
H1_mix_00087484	chr9	+	1756	1	Antisense	novelGene_ENSG00000288924.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	285	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGGCACGGGCTCATGC	3203	False	NA	NA	False	NA	NA	NA	129891880	129893636	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr9_+_129891900_129893600
H1_mix_00087486	chr9	+	1794	1	Intergenic	novelGene_1609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACGCTCAAAATGGCAAA	NA	False	NA	NA	False	NA	NA	NA	137128689	137130483	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_137128700_137130500
H1_mix_00087487	chr9	+	7503	48	NIC	ENSG00000107099.18	novel	6538	46	NA	NA	26	0	intron_retention	FALSE	canonical	0	0	junction_1	5.50722805840464	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCCCTTTGCAACTCAT	8	True	NA	18	True	AATAAA	-26	NA	215196	465255	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_215417_271626_271730_286460_286637_289509_289582_304580_304705_311953_312167_317042_317129_325670_325738_328021_328172_332397_332479_334224_334385_336581_336719_339005_339100_340158_340322_368017_368136_370229_370301_371427_371567_372184_372287_376209_376306_376976_377212_379770_379936_382512_382686_386330_386427_390470_390567_396784_396935_399145_399260_404917_405074_406929_407070_414781_414952_418067_418208_420400_420584_420948_421079_422047_422136_426884_426982_428361_428497_429701_429855_432165_432325_433874_433976_434782_434976_439244_439389_441285_441418_441874_442010_443426_443517_446369_446607_449783_449928_452010_452118_463516_463688_464158
H1_mix_00087488	chr9	+	672	5	NIC	ENSG00000107104.21	novel	2232	5	NA	NA	3	4	combination_of_known_splicesites	FALSE	canonical	2	6	junction_2	7.14142842854285	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCCTTTCATTCCTGCTC	-12	True	NA	-47	True	AATATA	-5	NA	470300	475461	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_470375_470555_470683_471445_471587_473193_473274_475211
H1_mix_00087490	chr9	+	5714	16	NNC	ENSG00000107104.21	novel	5348	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	98.403703634004	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTCCCTGTTTCAT	-13	True	NA	15	True	AATAAA	-16	NA	504694	746103	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_504755_523892_524007_539515_539634_540507_540668_593608_593861_676889_677010_710803_713465_730050_730249_731157_731267_732377_732618_734747_734836_738284_738505_740791_740935_742204_742406_744490_744590_745172
H1_mix_00087493	chr9	+	1776	8	NIC	ENSG00000080503.24	novel	1843	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	32.1444444052538	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGTAATTTCGAAGAATGT	11	True	NA	3	True	AATAAA	-4	NA	2158473	2193560	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_2158595_2159813_2159910_2161685_2161904_2181570_2181677_2182140_2182243_2186095_2186229_2191265_2191409_2192703
H1_mix_00087495	chr9	+	708	2	Intergenic	novelGene_1515	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGCCTGTTTGGTGGTCT	4983	False	NA	9	True	ACTAAA	-17	NA	2276018	2281484	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_2276254_2281011
H1_mix_00087496	chr9	+	5185	18	FSM	ENSG00000147852.17	ENST00000680746.1	5185	18	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	66.1478369425632	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTGGTACAAAAAACATGGA	-3	True	NA	NA	False	NA	NA	NA	2621566	2655931	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_2622272_2635452_2635573_2639858_2639982_2643159_2643532_2643627_2643751_2643836_2643960_2644733_2644854_2644956_2645083_2645573_2645746_2646333_2646553_2647473_2647593_2648207_2648348_2648668_2648811_2650369_2650517_2651414_2651499_2651873_2651955_2652779_2652950_2653832
H1_mix_00087500	chr9	+	2178	2	FSM	ENSG00000168263.9	ENST00000382082.4	2178	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGACTTGAGAAAATTTTT	-4	True	NA	9	True	AATAAA	-16	NA	2717509	2730037	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_2719096_2729445
H1_mix_00087501	chr9	+	930	2	NNC	ENSG00000237009.2	novel	734	2	NA	NA	-84655	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGCCTGTCTGGGTAGTC	NA	False	NA	23	True	AATAAA	-18	NA	3813986	3901248	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_3814501_3900832
H1_mix_00087503	chr9	+	1648	8	FSM	ENSG00000120158.12	ENST00000442869.5	1644	8	-4	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	39.1907944209726	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTTATATGTGAGGGAT	-1	True	NA	NA	False	NA	NA	NA	4792975	4860861	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_4793228_4823547_4823620_4833153_4833229_4834140_4834266_4841231_4841358_4844524_4844682_4849446_4849551_4860124
H1_mix_00087504	chr9	+	1895	10	ISM	ENSG00000096968.14	ENST00000381652.4	7023	25	0	63057	0	-11553	5prime_fragment	FALSE	canonical	3	10	junction_4	3.97212509593766	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGGATATGATAACTAGT	-16	True	NA	NA	False	NA	NA	NA	4985271	5066891	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_4985631_4985939_4986023_5021962_5022214_5029782_5029907_5044402_5044521_5050685_5050832_5054562_5054885_5055668_5055789_5064882_5065041_5066677
H1_mix_00087505	chr9	+	5240	15	ISM	ENSG00000096968.14	ENST00000381652.4	7023	25	83698	42	-56995	-42	3prime_fragment	FALSE	canonical	3	19	junction_10	3.92792202424786	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTATTTCAATATAAATA	NA	False	NA	NA	False	ATTAAA	-23	NA	5068969	5129906	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_5069209_5069924_5070053_5072491_5072627_5073697_5073786_5077452_5077581_5078305_5078445_5080228_5080381_5080532_5080684_5081724_5081862_5089673_5089864_5090445_5090571_5090738_5090912_5123003_5123122_5126332_5126447_5126683
H1_mix_00087506	chr9	+	6939	26	NNC	ENSG00000107036.12	novel	6786	26	NA	NA	-26	48	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	14.532721699668	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTATATAATTCTGCTTC	221	False	NA	61	True	NA	NA	NA	5628998	5776605	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_5629454_5656582_5656691_5689958_5690039_5713895_5714004_5720181_5720325_5720616_5720751_5732387_5732480_5738449_5738539_5742868_5743014_5743688_5743738_5745930_5746084_5747301_5747506_5753199_5753239_5753535_5753647_5754840_5754931_5756211_5756373_5757312_5757452_5762540_5762661_5763139_5763869_5765413_5765573_5765661_5765799_5768969_5769257_5770086_5770279_5772563_5772742_5772891_5773081_5773957
H1_mix_00087508	chr9	+	913	5	NNC	ENSG00000107036.12	novel	4127	22	NA	NA	1	-56414	at_least_one_novel_splicesite	TRUE	canonical	3	6	junction_4	32.8738117655985	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATTAATACATCGAAGAC	12	False	NA	NA	False	AATAAA	-20	NA	5629119	5712692	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_5629454_5656582_5656691_5689958_5690039_5710415_5710475_5712360
H1_mix_00087510	chr9	+	624	1	FSM	ENSG00000233846.2	ENST00000456723.1	487	1	-45	-92	-45	92	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCAAGCTGTTAGTACAG	NA	False	NA	NA	False	NA	NA	NA	6278621	6279245	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_6278600_6279200
H1_mix_00087511	chr9	+	3112	8	FSM	ENSG00000147854.17	ENST00000484159.5	3112	8	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	12.1403358727031	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGGTAACTTGG	NA	False	NA	NA	False	NA	NA	NA	6434087	6495998	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_6434174_6460572_6460792_6475390_6475501_6477621_6477809_6481642_6481767_6481991_6482100_6486820_6486926_6493825
H1_mix_00087512	chr9	+	498	1	FSM	ENSG00000237158.1	ENST00000451028.1	517	1	-12	31	-12	-31	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACCCTAGCCAAACATAC	NA	False	NA	NA	False	TTTAAA	-35	NA	6568831	6569329	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_6568800_6569300
H1_mix_00087513	chr9	+	4251	21	NIC	ENSG00000107077.19	novel	4338	22	NA	NA	-84	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_18	22.5753737510589	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTCTCTGACTTGCTT	171	False	NA	5	True	AATAAA	-18	NA	6757888	7175648	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_6758204_6792971_6793133_6805598_6805775_6814630_6814746_6849506_6849701_6880011_6880062_6887959_6888064_6893094_6893233_6980924_6981119_6984165_6984405_6986343_6986667_6990415_6990525_7011697_7011880_7013787_7014002_7015852_7015930_7046861_7046918_7049091_7049201_7103684_7103871_7165237_7165358_7169797_7169891_7174552
H1_mix_00087514	chr9	+	1221	1	FSM	ENSG00000230581.2	ENST00000446382.2	1122	1	-149	50	-149	-50	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAGTATGATGAGTCCGG	247	False	NA	NA	False	NA	NA	NA	6834306	6835527	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_6834300_6835500
H1_mix_00087515	chr9	+	1064	9	FSM	ENSG00000107077.19	ENST00000420847.2	1064	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	32.7545321291573	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGAGAGGACATCTACA	NA	False	NA	NA	False	NA	NA	NA	7013787	7169829	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_7014002_7015852_7015930_7046861_7046918_7049091_7049201_7103684_7103871_7105401_7105501_7128065_7128237_7165237_7165358_7169797
H1_mix_00087516	chr9	+	366	2	FSM	ENSG00000225706.2	ENST00000430766.1	1959	2	-48	1641	-41	-1641	multi-exon	FALSE	canonical	2	7	junction_1	0	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTGCCCCCATAAACTG	67	False	NA	NA	False	NA	NA	NA	8858085	8860083	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_8858324_8859955
H1_mix_00087517	chr9	+	730	6	FSM	ENSG00000164975.16	ENST00000421710.5	730	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	136.324025762152	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGATTTCACCTTCAATGA	14	True	NA	NA	False	NA	NA	NA	15422878	15453104	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_15423194_15423908_15423987_15433551_15433637_15444601_15444707_15451319_15451403_15453040
H1_mix_00087518	chr9	+	4682	10	NNC	ENSG00000164975.16	novel	3000	9	NA	NA	0	1674	intron_retention	FALSE	non_canonical	0	0	junction_9	108.936384199537	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAAGTTAAAACTGTATA	14	True	NA	NA	False	AATAAA	-4	NA	15422878	15464134	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_15423194_15423908_15423987_15433551_15433637_15444601_15444707_15447094_15447245_15451319_15451403_15453040_15453206_15457959_15458068_15459718_15463243_15464065
H1_mix_00087519	chr9	+	1259	6	FSM	ENSG00000164989.17	ENST00000432954.1	2181	6	0	922	0	-922	multi-exon	FALSE	canonical	3	12	junction_2	1.6	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTGTTTTCTATTGAA	NA	False	NA	NA	False	NA	NA	NA	15777767	15875161	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_15777827_15778967_15779151_15784508_15784695_15846701_15846848_15848892_15848948_15874531
H1_mix_00087520	chr9	+	425	3	FSM	ENSG00000234779.1	ENST00000450445.1	428	3	3	0	3	0	multi-exon	FALSE	canonical	1	1	junction_1	12	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGATTGTACTGTGAAAC	NA	False	NA	4	True	AATAAA	-17	NA	16726816	16727524	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_16726956_16727030_16727107_16727314
H1_mix_00087523	chr9	+	6213	1	FSM	ENSG00000273226.1	ENST00000609982.1	546	1	-5275	-392	-5275	392	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTAAACAAAACAAAACAGCA	NA	False	NA	NA	False	NA	NA	NA	19370175	19376388	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_19370200_19376400
H1_mix_00087524	chr9	+	2773	6	FSM	ENSG00000177076.6	ENST00000340967.3	2773	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.49666295470958	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGGCATTTACTTAATA	-1	True	NA	14	True	ATTAAA	-17	NA	19409008	19452505	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_19409193_19423861_19423977_19424699_19424842_19434946_19435085_19446280_19446419_19450449
H1_mix_00087525	chr9	+	241	4	ISM	ENSG00000188352.13	ENST00000338382.11	5794	44	0	275529	0	-49691	5prime_fragment	FALSE	canonical	3	74	junction_1	55.1603722491669	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTAGTGGTTCGAACAGC	-2	True	NA	NA	False	NA	NA	NA	20684258	20720421	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_20684294_20715321_20715411_20717793_20717869_20720379
H1_mix_00087526	chr9	+	5762	43	ISM	ENSG00000188352.13	ENST00000338382.11	5794	44	31063	-3	-10964	-2	3prime_fragment	FALSE	canonical	2	126	junction_34	29.6887099944371	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCGTGTGACTTTTGTTT	5069	False	NA	16	True	AGTAAA	-17	NA	20715321	20995953	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_20715411_20717793_20717869_20720379_20720535_20740235_20740341_20758089_20758192_20764868_20765074_20770031_20770239_20778680_20778769_20781726_20781930_20789350_20789609_20819795_20819901_20820323_20820426_20820940_20821072_20822988_20823116_20862577_20862713_20865925_20865977_20866928_20867013_20874680_20874808_20881870_20882057_20885108_20885231_20907149_20907243_20912865_20912955_20916892_20916938_20923659_20923769_20926300_20926418_20929357_20929597_20933013_20933104_20944626_20944775_20946700_20946821_20948270_20948394_20948850_20948929_20949603_20949676_20950995_20951099_20952984_20953066_20976419_20976549_20978338_20978455_20981425_20981687_20982356_20982447_20986287_20986466_20988331_20988430_20990122_20990375_20993252_20993329_20995555
H1_mix_00087529	chr9	+	436	1	FSM	ENSG00000229835.2	ENST00000427983.2	1768	1	-202	1534	-202	-1534	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGGGCGCGAACAAATTGA	NA	False	NA	NA	False	NA	NA	NA	21694973	21695409	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_21695000_21695400
H1_mix_00087531	chr9	+	227	1	FSM	ENSG00000215221.2	ENST00000399822.2	382	1	238	-83	238	83	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAAAAAAAAAGTATGAA	273	False	NA	NA	False	AATAAA	-19	NA	22012392	22012619	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_22012400_22012600
H1_mix_00087532	chr9	+	1535	14	FSM	ENSG00000096872.17	ENST00000429045.6	1462	14	0	-73	0	73	multi-exon	FALSE	canonical	3	10	junction_13	49.9966862807252	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGCCCCTACAATGGCAAA	-7	True	NA	NA	False	AATAAA	-41	NA	26956478	27036873	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_26956517_26961948_26962088_26978127_26978264_26980570_26980620_26984256_26984356_26984498_26984560_26988668_26988729_26990133_26990196_27009019_27009159_27011905_27011969_27016906_27017051_27018646_27018688_27029024_27029105_27036449
H1_mix_00087534	chr9	+	2147	1	FSM	ENSG00000235453.12	ENST00000644531.1	668	1	-388	-1091	281	1091	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAATCAGTATTCAAAATT	243	False	NA	NA	False	ACTAAA	-5	NA	32551956	32554103	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_32552000_32554100
H1_mix_00087535	chr9	+	1907	7	FSM	ENSG00000086065.14	ENST00000419016.6	1957	7	0	50	0	-50	multi-exon	FALSE	canonical	2	15	junction_6	295.392394395432	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACTCTCATGTGTCTGC	6	True	NA	NA	False	NA	NA	NA	33264878	33282019	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_33265148_33266009_33266115_33267852_33267900_33270622_33270717_33271151_33271224_33276455_33276565_33280808
H1_mix_00087536	chr9	+	3663	16	NNC	ENSG00000086102.19	novel	3513	16	NA	NA	-89	25	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_11	40.2412723456901	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGATTTAATTCTGCTAC	NA	False	NA	30	True	AATAAA	-40	NA	33290422	33348748	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_33290598_33294419_33295428_33301262_33301422_33303190_33303269_33307193_33307300_33311105_33311178_33313653_33313794_33318730_33318831_33318909_33319128_33328580_33328679_33332471_33332503_33338506_33338590_33342745_33342855_33344068_33344189_33347037_33347118_33347662
H1_mix_00087537	chr9	+	558	2	FSM	ENSG00000230453.10	ENST00000426460.2	558	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGAGGTTAGTTATATG	NA	False	NA	NA	False	NA	NA	NA	33566971	33568885	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_33567315_33568670
H1_mix_00087538	chr9	+	875	1	FSM	ENSG00000234373.1	ENST00000454116.1	635	1	75	-315	75	315	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACCTCAAACCCTGTGAAG	NA	False	NA	NA	False	NA	NA	NA	33576454	33577329	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_33576500_33577300
H1_mix_00087539	chr9	+	3932	3	FSM	ENSG00000281128.2	ENST00000667245.1	3941	3	0	9	0	-9	multi-exon	FALSE	canonical	2	4	junction_2	18.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATGAGAAATAAAGCTCT	NA	False	NA	NA	False	NA	NA	NA	33676784	33687981	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_33677510_33678089_33681074_33687758
H1_mix_00087540	chr9	+	1786	3	FSM	ENSG00000281128.2	ENST00000667902.1	1786	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	15	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTGTATTTGTCAATTT	NA	False	NA	NA	False	CATAAA	-7	NA	33676962	33681934	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_33677510_33678089_33678288_33680893
H1_mix_00087542	chr9	+	386	1	FSM	ENSG00000231165.3	ENST00000432077.2	293	1	108	-201	108	201	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGGGCCTAAGAACGTGT	NA	False	NA	NA	False	NA	NA	NA	33695874	33696260	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_33695900_33696300
H1_mix_00087543	chr9	+	1777	6	FSM	ENSG00000165006.14	ENST00000626262.2	1753	6	-24	0	16	0	multi-exon	FALSE	canonical	3	18	junction_2	124.59277667666	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGGTGGGGAAGATTCGG	NA	False	NA	-64	True	NA	NA	NA	34179020	34251698	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_34179241_34220907_34220949_34241184_34242109_34249778_34249962_34250657_34250760_34251391
H1_mix_00087544	chr9	+	1061	5	FSM	ENSG00000164978.18	ENST00000379158.7	998	5	-63	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	37.302814907189	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTCCTTCTAACCTGTT	5	True	NA	23	True	AATAAA	-16	NA	34329505	34343699	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_34329600_34336228_34336342_34338712_34338848_34339023_34339167_34343123
H1_mix_00087545	chr9	+	846	8	FSM	ENSG00000213930.12	ENST00000473506.6	838	8	-8	0	-3	0	multi-exon	FALSE	canonical	1	4	junction_2	68.8111879844894	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGTCTCCCAAGTAGGAT	-10	True	NA	NA	False	NA	NA	NA	34646629	34648894	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_34646787_34647088_34647259_34647540_34647568_34647656_34647706_34647831_34647962_34648114_34648172_34648333_34648457_34648761
H1_mix_00087548	chr9	+	985	5	FSM	ENSG00000213930.12	ENST00000472111.5	973	5	-12	0	0	0	multi-exon	FALSE	canonical	3	166	junction_3	25.0636689253589	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTCCCTAACTTTCTTAT	12	True	NA	NA	False	NA	NA	NA	34646651	34648486	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_34646787_34647088_34647259_34647491_34647962_34648114_34648172_34648333
H1_mix_00087551	chr9	+	2722	22	NIC	ENSG00000258728.2	novel	4479	22	NA	NA	62	8	combination_of_known_splicesites	TRUE	canonical	2	6	junction_10	80.8794629578156	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAGAAATTATTATCCAAT	33	False	NA	21	True	AATAAA	-29	NA	34646706	34661894	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_34646787_34647088_34647259_34647491_34647568_34647656_34647706_34647831_34647962_34648114_34648172_34648333_34648457_34648761_34648895_34648997_34649082_34649409_34649565_34655217_34655318_34655604_34655666_34656738_34656909_34657034_34657150_34657302_34657336_34657420_34657588_34658519_34658684_34659758_34659901_34660273_34660394_34660503_34660601_34660853_34660937_34661481
H1_mix_00087555	chr9	+	1388	10	FSM	ENSG00000137070.19	ENST00000602473.5	1388	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	3.90946935239093	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGGAGAGACAGCTGCC	25	False	NA	NA	False	AATAAA	-30	NA	34655217	34660819	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_34655318_34655604_34655666_34656738_34656909_34657034_34657150_34657302_34657336_34657420_34657588_34658519_34658684_34659758_34659901_34660273_34660394_34660503
H1_mix_00087556	chr9	+	2651	5	FSM	ENSG00000137094.16	ENST00000682809.1	2651	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	92.3485246227572	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCATCTGAGCAGGAGCAA	25	True	NA	20	True	AATAAA	-15	NA	34989744	34998428	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_34989832_34990498_34990813_34993199_34993445_34996264_34996867_34997025
H1_mix_00087557	chr9	+	685	3	FSM	ENSG00000137094.16	ENST00000539059.1	683	3	-2	0	-2	0	multi-exon	FALSE	canonical	2	10	junction_1	97.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAGGCGTCGCCTCAACC	1005	False	NA	NA	False	NA	NA	NA	34991340	34996628	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_34991417_34993199_34993445_34996264
H1_mix_00087558	chr9	+	423	1	FSM	ENSG00000233148.2	ENST00000417620.2	583	1	21	139	21	-139	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTTCTTCATGGAACATA	1494	False	NA	NA	False	ATTAAA	-45	NA	35010723	35011146	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_35010700_35011100
H1_mix_00087559	chr9	+	6426	40	FSM	ENSG00000198722.15	ENST00000619578.4	6426	40	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_36	47.9507609601776	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTGGGGTTTGGTAAT	17	True	NA	17	True	AATAAA	-13	NA	35161991	35405334	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_35162306_35228014_35228045_35231119_35231220_35236468_35236587_35237702_35237827_35243290_35243365_35258992_35259051_35295695_35295931_35310466_35310782_35313898_35313990_35366946_35366994_35370317_35370397_35375126_35375202_35376027_35376248_35377467_35377696_35378294_35378437_35380469_35380640_35381099_35381216_35381555_35381720_35382356_35382508_35384245_35384315_35385723_35385814_35386164_35386294_35389845_35389974_35390628_35390715_35396475_35396603_35396840_35396938_35397166_35397311_35397634_35397713_35398210_35398289_35398553_35398643_35398881_35399035_35399160_35399285_35399391_35399449_35399648_35399730_35400295_35400444_35401950_35402008_35403166_35403260_35403439_35403600_35403747
H1_mix_00087560	chr9	+	901	5	FSM	ENSG00000159884.12	ENST00000378407.7	899	5	-2	0	-2	0	multi-exon	FALSE	canonical	3	8	junction_4	76.3053078101386	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGAGTGCTCCTGTGTGTT	-19	True	NA	14	True	ACTAAA	-19	NA	35658301	35661186	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_35658486_35658575_35658728_35660400_35660462_35660556_35660648_35660773
H1_mix_00087561	chr9	+	1339	3	FSM	ENSG00000159884.12	ENST00000421582.2	1324	3	-15	0	-2	0	multi-exon	FALSE	canonical	3	167	junction_2	14	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTCATAGCAAAACTGAGA	-19	True	NA	NA	False	NA	NA	NA	35658301	35661403	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_35658486_35658575_35658728_35660400
H1_mix_00087562	chr9	+	1496	8	FSM	ENSG00000107175.12	ENST00000486056.1	1496	8	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_4	26.6236046870181	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAATGGCTTTCTGGGTCT	-22	True	NA	13	True	NA	NA	NA	35732597	35736860	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_35732902_35732995_35733283_35733395_35733486_35735108_35735216_35735305_35735375_35736047_35736133_35736226_35736312_35736391
H1_mix_00087565	chr9	+	2644	10	ISM	ENSG00000137103.20	ENST00000377988.6	3731	13	-279	7611	-9	0	5prime_fragment	FALSE	canonical	3	26	junction_3	19.6003275356861	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTCCACACTCTGTCCA	-43	True	NA	19	True	AATAAA	-18	NA	35829218	35847235	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_35829956_35834460_35834651_35835010_35835219_35841133_35841268_35841525_35841795_35842391_35842718_35845974_35846069_35846257_35846382_35846468_35846612_35846816
H1_mix_00087566	chr9	+	14131	14	FSM	ENSG00000137103.20	ENST00000377991.9	14112	14	-19	0	-15	0	multi-exon	FALSE	canonical	1	2	junction_1	20.5814876317553	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTTCTGGAATTTTTT	-49	True	NA	NA	False	AATAAA	-37	NA	35829212	35865518	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_35829320_35829876_35829956_35834460_35834651_35835010_35835219_35841133_35841268_35841525_35841795_35842391_35842718_35845974_35846069_35846257_35846382_35846468_35846612_35846816_35846996_35852826_35852974_35853140_35853258_35853504
H1_mix_00087567	chr9	+	2104	4	FSM	ENSG00000122694.16	ENST00000377959.5	812	4	-262	-1030	-56	27	multi-exon	FALSE	canonical	3	17	junction_3	113.620225116638	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGCTGAGACAATCCGTG	57	False	NA	52	True	NA	NA	NA	36136479	36163940	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_36136792_36147785_36147895_36148546_36148651_36162361
H1_mix_00087568	chr9	+	962	8	FSM	ENSG00000165304.8	ENST00000487398.3	962	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	116.417265007544	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAACTTTATTTTTAAATA	29	True	NA	NA	False	NA	NA	NA	36572923	36630367	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_36573199_36581643_36581740_36589535_36589653_36594627_36594772_36597221_36597291_36599393_36599487_36607574_36607674_36630298
H1_mix_00087569	chr9	+	1972	16	FSM	ENSG00000165304.8	ENST00000626154.2	1966	16	-6	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	133.067334667662	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTCATTGGAACTACCA	29	True	NA	NA	False	CATAAA	-25	NA	36572923	36677417	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_36573008_36589535_36589653_36594627_36594772_36597221_36597291_36599393_36599487_36607578_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
H1_mix_00087570	chr9	+	2298	17	NIC	ENSG00000165304.8	novel	2452	18	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	2	19	junction_3	111.690909992712	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTCTCTTTTTTGTAT	38	True	NA	-51	True	AATAAA	-18	NA	36572932	36677683	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_36573008_36581643_36581740_36583626_36583713_36594627_36594772_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
H1_mix_00087572	chr9	+	7933	2	FSM	ENSG00000281649.3	ENST00000654889.1	7911	2	-22	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTTGGATCATTTGTTTC	29	False	NA	NA	False	ATTAAA	-40	NA	37079934	37090242	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_37084293_37086667
H1_mix_00087573	chr9	+	386	1	FSM	ENSG00000281649.3	ENST00000628924.1	2835	1	-331	2780	-331	-1830	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGACAGCAAAAAGAAGAGA	4654	False	NA	NA	False	AAAACA	-40	NA	37084658	37085044	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_37084700_37085000
H1_mix_00087574	chr9	+	963	3	NNC	ENSG00000147905.18	novel	1219	4	NA	NA	11	-54	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	25.5	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCTTCACTGCTTTTTT	-7	True	NA	NA	False	AGTAAA	-17	NA	37120584	37187000	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_37120628_37126311_37126943_37186711
H1_mix_00087575	chr9	+	661	1	FSM	ENSG00000236156.2	ENST00000455954.2	410	1	-219	-32	-219	32	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGAGTGACACGGACCTT	NA	False	NA	NA	False	AATGAA	-29	NA	37433957	37434618	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_37434000_37434600
H1_mix_00087577	chr9	+	2029	7	FSM	ENSG00000165275.10	ENST00000377753.6	2027	7	-2	0	-2	0	multi-exon	FALSE	canonical	2	3	junction_2	26.9691181415584	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACAGTATTGATTAAGT	-10	True	NA	1	True	ATTAAA	-10	NA	37753800	37778965	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_37753853_37761902_37762118_37768075_37768229_37769940_37770020_37770671_37770740_37776281_37776406_37777627
H1_mix_00087583	chr9	+	1482	1	Intergenic	novelGene_1551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCAATCTCCTGTTGATG	NA	False	NA	-2	True	TATAAA	-13	NA	41036714	41038196	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_41036700_41038200
H1_mix_00087584	chr9	+	1659	2	FSM	ENSG00000226007.3	ENST00000446626.2	2245	2	-27	613	0	251	multi-exon	FALSE	canonical	3	14	junction_1	0	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGAGCCAGACCTATGT	NA	False	NA	NA	False	AGTAAA	-30	NA	62532336	62534109	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_62532689_62532802
H1_mix_00087585	chr9	+	566	3	NNC	ENSG00000170161.7	novel	667	3	NA	NA	8	-185	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	6	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGACCGTCTCTGTTCT	NA	False	NA	NA	False	ATTAAA	-9	NA	62897456	62898717	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_62897735_62897877_62897980_62898531
H1_mix_00087586	chr9	+	2837	17	FSM	ENSG00000147996.17	ENST00000377392.9	2863	17	26	0	2	0	multi-exon	FALSE	canonical	1	1	junction_11	563.683740562915	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGATGTTGATGTTGACGA	NA	False	NA	NA	False	AATAAA	-15	NA	65675859	65734040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65693385_65693474_65698514_65698562_65700250_65700338_65702969_65703015_65704330_65704589_65708139_65708959_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
H1_mix_00087589	chr9	+	1431	14	NIC	ENSG00000147996.17	novel	1662	15	NA	NA	38	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_7	554.062180091986	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGTCACCATTTTATG	77	False	NA	NA	False	ATTAAA	-15	NA	65676024	65733994	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65698514_65698562_65702969_65703015_65708901_65708959_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
H1_mix_00087590	chr9	+	2955	3	FSM	ENSG00000147996.17	ENST00000461932.5	2970	3	15	0	15	0	multi-exon	FALSE	canonical	3	1512	junction_1	32.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGTCACCATTTTATG	NA	False	NA	NA	False	ATTAAA	-15	NA	65719399	65733994	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_65720093_65731629_65731699_65731801
H1_mix_00087593	chr9	+	351	4	ISM	ENSG00000274349.5	ENST00000621410.5	4016	5	41	12694	28	-2	5prime_fragment	FALSE	canonical	2	8	junction_1	3.29983164553722	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGAGTGGGCATTAACAG	10	False	NA	NA	False	NA	NA	NA	66900765	66908732	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_66900837_66903517_66903577_66908237_66908365_66908638
H1_mix_00087594	chr9	+	662	7	FSM	ENSG00000196873.16	ENST00000616550.4	721	7	59	0	0	0	multi-exon	FALSE	canonical	3	119	junction_4	495.795544778513	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGCAGAAGAGAATGAAATC	NA	False	NA	NA	False	AGTAAA	-38	NA	68241912	68259361	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_68242186_68245212_68245300_68247612_68247710_68248805_68248898_68256920_68256981_68258531_68258570_68259346
H1_mix_00087595	chr9	+	1381	10	FSM	ENSG00000196873.16	ENST00000611426.4	1381	10	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	272.327009310498	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTCTGTTCCTAAAACATC	NA	False	NA	NA	False	ATTAAA	-22	NA	68241912	68269435	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_68242186_68243182_68243281_68245212_68245300_68247612_68247710_68248805_68248898_68256920_68256981_68258531_68258570_68264467_68264515_68266219_68266307_68268933
H1_mix_00087597	chr9	+	1780	16	FSM	ENSG00000196873.16	ENST00000615061.4	1771	16	-9	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	307.833259339461	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGTTATGACTGTTATT	0	True	NA	NA	False	ATTAAA	-44	NA	68241944	68299994	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_68242186_68243182_68243281_68245212_68245300_68247612_68247710_68248805_68248898_68256920_68256981_68258531_68258570_68264467_68264515_68266219_68266307_68268933_68268979_68274881_68274939_68285988_68286041_68297579_68297649_68297751_68297818_68298963_68299094_68299480
H1_mix_00087598	chr9	+	1266	15	NNC	ENSG00000196873.16	novel	1813	16	NA	NA	0	1610	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	418.337458987164	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAGAGCCAGAGCCAGGC	-1	True	NA	NA	False	AAAAAG	-2	NA	68241982	68301645	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_68242186_68245212_68245300_68247612_68247710_68248805_68248898_68258531_68258570_68259346_68259435_68264467_68264515_68268933_68268979_68274881_68274939_68285988_68286041_68297579_68297649_68297751_68297818_68298963_68299094_68299480_68299644_68301613
H1_mix_00087600	chr9	+	2954	15	NIC	ENSG00000107242.20	novel	3115	16	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	2.0763488362498	2643	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATTGTGGTGGTACATCG	-1	True	NA	-1	True	AATAAA	-12	NA	68705239	69009172	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_68705763_68818460_68818546_68822614_68822684_68863836_68863968_68876676_68876795_68888980_68889134_68894338_68894639_68917547_68917760_68919478_68919563_68919680_68919730_68923301_68923387_68934889_68935046_68940645_68940791_68991139_68991258_69008446
H1_mix_00087601	chr9	+	4334	24	FSM	ENSG00000285130.2	ENST00000643352.1	4322	24	-12	0	-9	0	multi-exon	TRUE	canonical	2	7	junction_5	116.90480511663	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCAGTAAATGATTTTTT	-34	True	NA	NA	False	NA	NA	NA	69035737	69248929	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_69035948_69046384_69046483_69053139_69053261_69064937_69065036_69099900_69100062_69151650_69151772_69212547_69212602_69216338_69216464_69218256_69218360_69220886_69221497_69225303_69225408_69226021_69226176_69227764_69227874_69227980_69228115_69229183_69229251_69230081_69230233_69234438_69234548_69236027_69236239_69236948_69237137_69237877_69237974_69238709_69238790_69239936_69240148_69246689_69246791_69248011
H1_mix_00087602	chr9	+	490	4	FSM	ENSG00000119139.21	ENST00000643713.1	490	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	117.985874860793	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAACAGTACACTGTGACC	-29	True	NA	NA	False	TTTAAA	-30	NA	69121263	69212572	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_69121366_69121483_69121726_69151650_69151772_69212547
H1_mix_00087605	chr9	+	550	4	FSM	ENSG00000204711.9	ENST00000480564.1	550	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	43.058100283222	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAAAACAGTAAATCCTC	119	False	NA	-17	True	NA	NA	NA	69820959	69858158	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_69821032_69844516_69844626_69856554_69856674_69857908
H1_mix_00087606	chr9	+	688	3	FSM	ENSG00000198887.9	ENST00000475540.1	688	3	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	8.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAGAAAAGGAAAAAAGAGG	NA	False	NA	NA	False	NA	NA	NA	70323572	70344674	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_70323607_70324020_70324144_70344143
H1_mix_00087607	chr9	+	3172	4	FSM	ENSG00000155621.15	ENST00000377031.7	1107	4	-214	-1851	-179	-953	multi-exon	FALSE	canonical	2	4	junction_3	38.3173879879908	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTACGTTTTTGCAAAT	NA	False	NA	NA	False	NA	NA	NA	71911330	71985101	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_71911837_71947005_71947113_71971504_71971619_71982656
H1_mix_00087608	chr9	+	892	10	NNC	ENSG00000134996.12	novel	1348	10	NA	NA	40	-425	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	59.5286008653626	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGAACACGGCAGTGTTG	23	True	NA	20	True	TATAAA	-10	NA	75088553	75146840	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_75088736_75117503_75117551_75127568_75127620_75130577_75130642_75131769_75131824_75133293_75133402_75134345_75134396_75137537_75137617_75140833_75140933_75146682
H1_mix_00087610	chr9	+	5572	5	NNC	ENSG00000187210.14	novel	5566	4	NA	NA	0	-17	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	107.296318669375	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATCCATTCAGAAACCAAG	24	True	NA	-8	True	ATTAAA	-2	NA	76459221	76507397	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_76459306_76460059_76460178_76462161_76462227_76500915_76501062_76502238
H1_mix_00087615	chr9	+	3215	17	NIC	ENSG00000148019.14	novel	11233	17	NA	NA	6	5	combination_of_known_junctions	FALSE	canonical	3	32	junction_8	69.3765765586628	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACGTGTGGTTTTGTTTTT	5	True	NA	8	True	AATGAA	-13	NA	78236086	78271681	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_78236604_78240022_78240196_78240291_78240365_78241695_78241800_78243461_78243637_78246668_78246783_78248290_78248356_78248761_78248874_78251904_78252044_78253231_78253278_78254835_78254965_78262906_78262985_78264149_78264317_78265371_78265544_78265858_78265907_78266441_78266704_78270840
H1_mix_00087616	chr9	+	2626	16	FSM	ENSG00000148019.14	ENST00000376597.9	2626	16	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_8	66.7291040950898	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGTGTCTTAAAATATAG	125	False	NA	31	True	AATAAA	-25	NA	78236206	78267075	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_78236604_78240022_78240196_78240291_78240365_78241695_78241800_78243461_78243637_78246668_78246783_78248290_78248356_78248761_78248874_78251904_78252044_78253231_78253278_78254835_78254965_78262906_78262985_78264149_78264317_78265371_78265544_78265858_78265907_78266441
H1_mix_00087618	chr9	+	4424	18	NIC	ENSG00000106829.20	novel	2382	19	NA	NA	225	-145	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	46.946704672264	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTATGCTTATTTTTCTA	219	False	NA	4	True	ATTAAA	-13	NA	79572189	79726737	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_79572836_79573688_79573787_79574872_79574937_79576132_79576178_79612655_79612719_79652592_79652795_79704782_79704903_79705888_79705943_79706746_79706900_79708117_79708251_79708592_79708787_79709622_79709700_79718721_79718972_79720045_79720294_79721740_79721889_79722450_79722602_79722958_79723036_79725036
H1_mix_00087622	chr9	+	2351	1	FSM	ENSG00000231007.5	ENST00000488829.1	1500	1	-779	-72	-779	72	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAACTGCTGTGTAATTAC	NA	False	NA	NA	False	AATAAA	-30	NA	87010872	87013223	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_87010900_87013200
H1_mix_00087624	chr9	+	3747	2	Intergenic	novelGene_1574	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	148	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAACTGTAGTAAAAGATC	2490	False	NA	-16	True	NA	NA	NA	87413409	87420988	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_87413472_87417303
H1_mix_00087627	chr9	+	5772	26	FSM	ENSG00000196730.13	ENST00000622514.4	5772	26	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_1	90.6825319452429	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTTTTGATCTTTAATT	27	False	NA	18	True	AATAAA	-18	NA	87498534	87708633	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_87498637_87498969_87499140_87604953_87605176_87637942_87638082_87639353_87639484_87639649_87639699_87639788_87639816_87640297_87640451_87640801_87640848_87641968_87642059_87643375_87643469_87645894_87646015_87646460_87646560_87647304_87647404_87648780_87648880_87649920_87650119_87651526_87651725_87658028_87658128_87668596_87668675_87681403_87681627_87686550_87686740_87697006_87697205_87698655_87698795_87700116_87700238_87703028_87703218_87706131
H1_mix_00087631	chr9	+	1613	9	FSM	ENSG00000135047.16	ENST00000677262.1	1613	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	135.209501792589	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGGGCTTCTTTCTAT	0	True	NA	22	True	AATAAA	-18	NA	87726118	87731393	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_87726399_87727360_87727396_87727593_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380_87730499_87731007
H1_mix_00087632	chr9	+	2786	6	FSM	ENSG00000135047.16	ENST00000482054.2	2786	6	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	89.2591731980529	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTGGGCTCTAAGCCAT	0	True	NA	-9	True	AATAAA	-5	NA	87726118	87731447	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_87726399_87727593_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572
H1_mix_00087639	chr9	+	4505	3	NIC	ENSG00000213694.6	novel	4837	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	32	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTCGTAGTCCATGTGAT	NA	False	NA	26	True	AATAAA	-25	NA	88990862	89005010	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_88991185_88991469_88991696_89001053
H1_mix_00087641	chr9	+	1391	10	ISM	ENSG00000187742.15	ENST00000339901.8	3320	17	-19	18163	0	0	5prime_fragment	FALSE	canonical	3	89	junction_2	80.5165422770185	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGAGTCTTTCCATCT	-18	True	NA	NA	False	NA	NA	NA	89318499	89341479	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_89318613_89319651_89319798_89325547_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334521_89334731_89338457_89338581_89339863_89339954_89341346
H1_mix_00087642	chr9	+	3212	17	NIC	ENSG00000187742.15	novel	3320	17	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_2	81.7431189764619	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTCAGACTCTGGTG	-5	True	NA	16	True	AATAAA	-15	NA	89318512	89359642	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_89318613_89319651_89319798_89325547_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334635_89334731_89338457_89338581_89339863_89339954_89341346_89341480_89346881_89347049_89348078_89348215_89349775_89349930_89350631_89350853_89357410_89357566_89357998_89358192_89358720
H1_mix_00087643	chr9	+	3324	17	NNC	ENSG00000187742.15	novel	3320	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_6	78.2966863522972	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTCAGACTCTGGTG	1	True	NA	16	True	AATAAA	-15	NA	89318518	89359642	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_89318613_89319651_89319798_89325426_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334638_89334731_89338457_89338581_89339863_89339954_89341346_89341480_89346881_89347049_89348078_89348215_89349775_89349930_89350631_89350853_89357410_89357566_89357998_89358192_89358720
H1_mix_00087644	chr9	+	3314	18	NIC	ENSG00000187742.15	novel	3320	17	NA	NA	23	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_7	115.990334879537	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTCAGACTCTGGTG	24	True	NA	16	True	AATAAA	-15	NA	89318541	89359642	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_89318613_89319651_89319798_89325547_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334024_89334156_89334635_89334731_89338457_89338581_89339863_89339954_89341346_89341480_89346881_89347049_89348078_89348215_89349775_89349930_89350631_89350853_89357410_89357566_89357998_89358192_89358720
H1_mix_00087645	chr9	+	3584	17	FSM	ENSG00000187742.15	ENST00000534113.6	3584	17	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	91.9183571165194	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAGGCTTCTCAGTGGT	23	False	NA	36	True	AATAAA	-35	NA	89318850	89359662	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_89319068_89319651_89319798_89325426_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334521_89334731_89338457_89338581_89339863_89339954_89341346_89341480_89346881_89347049_89348078_89348215_89349775_89349930_89350631_89350853_89357410_89357566_89357998_89358192_89358720
H1_mix_00087646	chr9	+	3370	17	NNC	ENSG00000187742.15	novel	3584	17	NA	NA	77	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	104.170833250003	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTCAGACTCTGGTG	100	False	NA	16	True	AATAAA	-15	NA	89318927	89359642	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_89319068_89319651_89319798_89325426_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334638_89334731_89338457_89338581_89339863_89339954_89341346_89341480_89346881_89347049_89348078_89348215_89349775_89349930_89350631_89350853_89357410_89357566_89357998_89358192_89358720
H1_mix_00087652	chr9	+	211	1	FSM	ENSG00000231799.2	ENST00000438325.2	1197	1	-208	1194	-208	-1194	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGGCAAAGACGAGCAGCA	8493	False	NA	NA	False	NA	NA	NA	89449349	89449560	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_89449300_89449600
H1_mix_00087653	chr9	+	1297	3	FSM	ENSG00000130222.11	ENST00000375769.1	977	3	0	-320	0	0	multi-exon	FALSE	canonical	3	167	junction_1	18.5	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGCTCTTTATTGAGGG	26	False	NA	NA	False	AATAAA	-15	NA	89605037	89606555	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_89605534_89605666_89605881_89605968
H1_mix_00087654	chr9	+	695	3	FSM	ENSG00000130222.11	ENST00000494726.1	695	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	98	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGATCGACGTGGTGACG	80	False	NA	NA	False	NA	NA	NA	89605091	89606098	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_89605534_89605757_89605881_89605968
H1_mix_00087655	chr9	+	492	1	FSM	ENSG00000227399.1	ENST00000422570.1	483	1	-28	19	-28	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATGAATTCATGGCATAAT	NA	False	NA	NA	False	NA	NA	NA	92006033	92006525	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_92006000_92006500
H1_mix_00087656	chr9	+	868	5	NIC	ENSG00000165233.18	novel	857	6	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	97.4858964158406	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTCGTTCCTCAGTC	-13	True	NA	11	True	ATTAAA	-17	NA	93096156	93113283	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_93096353_93107673_93107828_93110567_93110722_93112217_93112290_93112991
H1_mix_00087659	chr9	+	6694	26	NNC	ENSG00000165238.17	novel	7080	30	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	16.5066774367224	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGGGCTGGAGTTTTGTT	-14	True	NA	17	True	AGTAAA	-17	NA	93184159	93309195	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_93184386_93184927_93185611_93229695_93229869_93230887_93231109_93234807_93234966_93238232_93238322_93239756_93239977_93247542_93247835_93252882_93253083_93256298_93256455_93256947_93257140_93258930_93259615_93261813_93262108_93262669_93262720_93263565_93263735_93263916_93264034_93267745_93267917_93268019_93268066_93268626_93268747_93288787_93289486_93289977_93290048_93292307_93292397_93292490_93293174_93297852_93298014_93308327_93308585_93308720
H1_mix_00087660	chr9	+	6718	27	NIC	ENSG00000165238.17	novel	7080	30	NA	NA	21	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_12	9.74778081253527	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGGACTTTGGTTTTTC	-14	True	NA	12	True	AATAAA	-15	NA	93184159	93320564	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_93184386_93184927_93185611_93229695_93229869_93230887_93231109_93234807_93234966_93238232_93238322_93239756_93239977_93247542_93247835_93252882_93253083_93256298_93256455_93256947_93257140_93258930_93259615_93261813_93262108_93262669_93262720_93263565_93263735_93263916_93264034_93267745_93267917_93268019_93268066_93268626_93268747_93288787_93289621_93289977_93290048_93292307_93292397_93292490_93293174_93297852_93298068_93308327_93308585_93317519_93317632_93320366
H1_mix_00087661	chr9	+	7805	29	FSM	ENSG00000165238.17	ENST00000432730.6	7805	29	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_25	19.4459940263662	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAGTGTGAAACAACAT	134	False	NA	18	True	AATAAA	-13	NA	93184929	93319204	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_93185611_93229695_93229869_93230887_93231109_93234807_93234966_93238232_93238322_93239756_93239977_93247542_93247835_93252882_93253083_93256298_93256455_93256947_93257140_93258930_93259615_93261813_93262108_93262669_93262720_93263565_93263735_93263916_93264034_93267745_93267917_93268019_93268066_93268626_93268747_93288787_93289621_93289977_93290048_93292307_93292397_93292490_93293174_93297852_93298068_93299069_93299262_93300050_93300150_93306776_93306822_93308327_93308585_93317519_93317632_93318027
H1_mix_00087662	chr9	+	6834	29	FSM	ENSG00000165238.17	ENST00000395477.6	6834	29	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_25	18.0032239176368	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGTTTTTCAAACTATT	134	False	NA	20	True	AATAAA	-23	NA	93184929	93320572	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_93185611_93229695_93229869_93230887_93231109_93234807_93234966_93238232_93238322_93239756_93239977_93247542_93247835_93252882_93253083_93256298_93256455_93256947_93257140_93258930_93259615_93261813_93262108_93262669_93262720_93263565_93263735_93263916_93264034_93267745_93267917_93268019_93268066_93268626_93268747_93288787_93289621_93289977_93290048_93292307_93292397_93292490_93293174_93297852_93298068_93299069_93299262_93300050_93300150_93306776_93306822_93308327_93308585_93317519_93317632_93320366
H1_mix_00087663	chr9	+	6679	22	FSM	ENSG00000165238.17	ENST00000411624.5	6679	22	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_8	9.65551784956719	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGTGAAACAACATCTTT	65	False	NA	22	True	AATAAA	-17	NA	93234922	93319208	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_93234966_93238232_93238322_93239756_93239977_93247542_93247835_93252882_93253083_93256298_93256455_93256947_93257140_93258930_93259615_93261813_93262108_93262669_93262720_93263565_93263735_93263916_93264034_93267745_93267917_93268019_93268066_93268626_93268747_93288787_93289621_93289977_93290048_93292307_93292397_93292490_93293174_93297852_93298068_93308327_93308585_93317519
H1_mix_00087664	chr9	+	2344	2	FSM	ENSG00000165238.17	ENST00000471076.1	2344	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGACTTTGGTTTTTCAA	2650	False	NA	14	True	AATAAA	-17	NA	93315487	93320566	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_93317632_93320366
H1_mix_00087665	chr9	+	921	3	Intergenic	novelGene_1580	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	43	junction_1	26.5	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCTCTTCACACGGACAC	NA	False	NA	45	True	AATAAA	-32	NA	93347933	93353318	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_93348187_93350052_93350155_93352752
H1_mix_00087666	chr9	+	2608	2	Intergenic	novelGene_1581	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	31	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTGCTCACACAAAGCCT	NA	False	NA	19	True	AATAAA	-6	NA	93347949	93353292	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_93350155_93352889
H1_mix_00087667	chr9	+	3765	18	NNC	ENSG00000048828.17	novel	5160	18	NA	NA	-99	555	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	18.2803996231106	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTACTACTTGAGCTAAACT	343	False	NA	NA	False	AATGAA	-35	NA	93452284	93565320	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_93452390_93471140_93471388_93476255_93476339_93497470_93497600_93498789_93498887_93515666_93515765_93515982_93516270_93527154_93527243_93529352_93529581_93532154_93532330_93543221_93543472_93550576_93550692_93556381_93556592_93557826_93558011_93558580_93558719_93561108_93561251_93562207_93562305_93564228
H1_mix_00087670	chr9	+	4534	5	NNC	ENSG00000175787.17	novel	2716	4	NA	NA	25	2138	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	7.69334127671456	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGGCTATGTACCTCAT	41	False	NA	22	True	AATAAA	-22	NA	94259352	94303967	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_94259423_94278757_94278846_94292340_94292468_94292973_94293070_94299814
H1_mix_00087672	chr9	+	3357	11	NIC	ENSG00000148110.17	novel	3402	12	NA	NA	-192	-122	combination_of_known_splicesites	FALSE	canonical	3	122	junction_4	137.224633357135	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGTGTCTTTTTTTTA	NA	False	NA	12	True	AATAAA	-20	NA	94374376	94460920	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_94374928_94415157_94415254_94429188_94429252_94438400_94438529_94444963_94445183_94446822_94446937_94451455_94451528_94453957_94454071_94456239_94456338_94458321_94458465_94459160
H1_mix_00087674	chr9	+	1178	3	FSM	ENSG00000231806.4	ENST00000452148.3	1193	3	1	14	1	-14	multi-exon	FALSE	canonical	2	10	junction_1	1	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAATGTGTG	452	False	NA	NA	False	NA	NA	NA	94555054	94568127	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_94555311_94558968_94559153_94567389
H1_mix_00087675	chr9	+	3984	3	FSM	ENSG00000231806.4	ENST00000644721.1	3974	3	-10	0	-10	0	multi-exon	FALSE	canonical	1	3	junction_1	4.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTGTAAATCAAAAACTTAA	-9	True	NA	NA	False	AATAAA	-3	NA	94555072	94570916	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_94555346_94558968_94559153_94567389
H1_mix_00087681	chr9	+	7628	18	FSM	ENSG00000182150.19	ENST00000683227.1	7620	18	-8	0	3	0	multi-exon	FALSE	canonical	3	43	junction_3	11.2904405778918	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTACTCATAAGCCATG	4	True	NA	3	True	AATAAA	-12	NA	95875693	96014557	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_95876085_95880868_95881294_95897848_95897972_95907077_95907272_95915667_95915830_95916226_95916435_95921174_95921316_95922304_95922419_95923259_95923380_95928078_95928151_95928718_95928865_95941453_95941550_95955913_95956014_95966561_95966715_95970575_95973089_95978060_95978216_96004519_96004702_96012224
H1_mix_00087683	chr9	+	2097	4	FSM	ENSG00000182150.19	ENST00000682951.1	2473	4	185	191	185	-159	multi-exon	FALSE	canonical	3	50	junction_2	10.6249183003395	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAGTGAACCTGGGAGGC	NA	False	NA	NA	False	NA	NA	NA	95970575	96005224	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_95970657_95971932_95973089_95978060_95978216_96004519
H1_mix_00087684	chr9	+	238	1	FSM	ENSG00000224546.2	ENST00000432132.2	1850	1	1672	-60	1672	60	mono-exon	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAACCTCTATCCAGACA	1701	False	NA	NA	False	NA	NA	NA	96147678	96147916	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_96147700_96147900
H1_mix_00087687	chr9	+	2842	3	Genic_Genomic	ENSG00000289356.1	novel	96	1	NA	NA	-85	5079	multi-exon	FALSE	canonical	0	0	junction_1	318.5	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGAAATTATCTTTTGTT	NA	False	NA	58	True	NA	NA	NA	97214748	97220008	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_+_97216492_97216706_97217381_97219583
H1_mix_00087688	chr9	+	3555	28	NIC	ENSG00000255036.6	novel	6269	49	NA	NA	713	-31112	combination_of_known_splicesites	FALSE	canonical	1	2	junction_27	7.7284147832352	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCACTTGCCTTTTTAAA	NA	False	NA	NA	False	AATAAA	-21	NA	97251541	97345821	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_97251558_97276568_97276698_97277555_97277627_97279361_97279474_97281515_97281670_97287659_97287736_97290583_97290666_97290853_97290903_97307735_97307807_97307982_97308133_97309413_97309605_97312112_97312202_97313235_97313346_97314392_97314522_97314617_97314729_97314850_97314947_97317064_97317229_97318462_97318583_97320125_97320206_97322832_97322922_97323780_97323904_97325018_97325193_97326553_97326670_97328019_97328147_97330153_97330194_97330321_97330768_97343339_97343564_97345605
H1_mix_00087689	chr9	+	2466	19	NIC	ENSG00000197816.16	novel	7060	37	NA	NA	-7303	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	9.9058842719808	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGATAAAGGAGGCTCAGC	NA	False	NA	NA	False	NA	NA	NA	97347313	97376818	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_97347667_97349110_97349292_97350408_97350556_97354568_97354714_97354891_97355009_97357626_97357726_97359981_97360102_97361725_97361899_97362195_97362252_97362362_97362442_97364050_97364129_97365672_97365740_97366558_97366701_97369921_97370083_97370640_97370779_97371594_97371707_97374542_97374649_97375453_97375590_97376762
H1_mix_00087691	chr9	+	550	4	FSM	ENSG00000119514.7	ENST00000610463.1	550	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	128.336363600588	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTTTAGGGTAAGTATT	326	False	NA	NA	False	NA	NA	NA	98808002	98835355	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_98808070_98826751_98826942_98831771_98831958_98835248
H1_mix_00087692	chr9	+	242	1	Intergenic	novelGene_1589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATTCCTTTCATTTTCTG	9614	False	NA	NA	False	NA	NA	NA	99670232	99670474	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_99670200_99670500
H1_mix_00087693	chr9	+	2990	18	FSM	ENSG00000119509.13	ENST00000262456.6	2968	18	-22	0	-8	0	multi-exon	FALSE	canonical	2	7	junction_14	10.2757819897918	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATTCACCTAAAAATGTG	-19	True	NA	-29	True	NA	NA	NA	100099252	100300788	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_100099417_100104497_100104628_100126382_100126550_100226061_100226236_100229659_100229828_100240059_100240241_100242569_100242680_100246615_100246788_100252282_100252439_100252906_100253137_100264821_100264929_100272863_100273077_100284319_100284604_100292325_100292437_100292946_100293044_100296916_100297147_100297935_100298011_100300567
H1_mix_00087694	chr9	+	6247	11	Fusion	ENSG00000241697.5_ENSG00000170681.7	novel	2575	10	NA	NA	10	142	multi-exon	FALSE	canonical	3	37	junction_10	365.482913417303	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTACTGTCATGGAATT	7	True	NA	NA	False	AATAAA	-30	NA	100473158	100588531	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr9_+_100473741_100498764_100498875_100509004_100509135_100513306_100513334_100516674_100516772_100547743_100547893_100550094_100550161_100561396_100561521_100572517_100572677_100576515_100578552_100585764
H1_mix_00087696	chr9	+	387	2	FSM	ENSG00000155827.12	ENST00000478072.2	609	2	0	222	0	-222	multi-exon	FALSE	canonical	3	228	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAAGCAGTTGTCTTTTC	8202	False	NA	NA	False	AAGAAA	-30	NA	101560680	101561230	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_101560927_101561089
H1_mix_00087697	chr9	+	6269	25	NIC	ENSG00000136824.19	novel	5928	25	NA	NA	12	0	intron_retention	FALSE	canonical	2	3	junction_23	72.6595825101931	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGATCATCAGTGTTTAA	5	True	NA	12	True	ATTAAA	-16	NA	104094320	104139651	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_104094449_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959_104102194_104102423_104102574_104111580_104111815_104113315_104113476_104113963_104114082_104114690_104114830_104116199_104116320_104118170_104118376_104120026_104120163_104123107_104123233_104124911_104125106_104126640_104126785_104127285_104127481_104129644_104129846_104132008_104132126_104134414_104134576_104135867_104138166_104139138
H1_mix_00087698	chr9	+	2892	16	FSM	ENSG00000070214.16	ENST00000374724.1	3088	16	0	196	0	-196	multi-exon	FALSE	canonical	3	9	junction_15	145.422082993685	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAATGGCAGTGTAGGTA	-9	True	NA	NA	False	NA	NA	NA	105244621	105438975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_105244905_105299219_105299310_105309723_105309867_105335562_105335700_105348357_105348452_105356211_105356382_105358343_105358434_105361190_105361331_105362820_105363008_105364554_105364721_105365482_105365640_105366345_105366430_105374597_105374736_105383122_105383360_105385421_105385503_105438280
H1_mix_00087699	chr9	+	1821	4	FSM	ENSG00000106701.13	ENST00000469022.5	1836	4	-1	16	-1	-16	multi-exon	FALSE	canonical	3	23	junction_2	1.4142135623731	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAACAAAACAAAACAAAAA	-33	True	NA	NA	False	NA	NA	NA	105448043	105473304	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_105448236_105464235_105464332_105468192_105468325_105471903
H1_mix_00087700	chr9	+	7073	8	ISM	ENSG00000106701.13	ENST00000481272.6	7730	14	36345	8	-16280	-8	3prime_fragment	FALSE	canonical	1	1	junction_4	5.11101251999952	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTCTTTTCCTGCTCTCT	NA	False	NA	-3	True	ATTAAA	-8	NA	105484378	105552425	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_105484503_105506398_105506609_105508616_105508716_105512806_105512937_105534492_105534594_105535066_105535319_105539262_105539352_105546357
H1_mix_00087706	chr9	+	10345	13	FSM	ENSG00000148143.13	ENST00000277225.10	10345	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	7.99826370046789	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGTGCATCTGTTGTAA	17	True	NA	9	True	AATAAA	-19	NA	106863165	107013634	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_106863356_106923353_106923604_106924132_106929760_106930524_106930690_106932445_106932550_106935502_106935622_106938915_106939108_106972004_106972273_106974136_106974274_106984185_106984410_107003293_107003427_107009544_107009669_107010822
H1_mix_00087707	chr9	+	3748	10	FSM	ENSG00000119318.13	ENST00000416373.6	3835	10	84	3	84	0	multi-exon	FALSE	canonical	1	3	junction_1	40.5830956719788	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAACATTGCACTTCTCAT	28	False	NA	8	True	TATAAA	-15	NA	107284136	107332189	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_107284188_107300140_107300223_107302034_107302115_107306378_107306648_107311681_107311738_107318751_107318880_107321982_107322119_107323889_107324018_107324833_107325005_107329542
H1_mix_00087711	chr9	+	8336	10	NIC	ENSG00000157654.19	novel	7507	11	NA	NA	-240	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	7.60116950066092	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGCTGCTTGTTTGACC	-7	True	NA	NA	False	ATTAAA	-28	NA	109779957	110172512	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_109780534_109867490_109867572_109880550_109880682_109923734_109923850_109925060_109925083_109931926_109932029_109942685_109943382_110015953_110016040_110136126_110138540_110168398
H1_mix_00087712	chr9	+	9091	7	FSM	ENSG00000157654.19	ENST00000314527.9	9578	7	0	487	0	-487	multi-exon	FALSE	canonical	3	17	junction_1	2.40947204913349	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCAACTCCAATTCTGT	-10	True	NA	NA	False	NA	NA	NA	109780197	109950989	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_109780534_109867490_109867572_109880550_109880682_109923734_109923850_109925060_109925083_109931926_109932029_109942685
H1_mix_00087714	chr9	+	13216	3	FSM	ENSG00000165185.15	ENST00000374244.3	2643	3	50	-10623	50	10623	multi-exon	FALSE	canonical	3	21	junction_2	56.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGTCTCTATAATGAGAG	63	False	NA	7	True	AATAAA	-20	NA	112487064	112629837	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_112487119_112574056_112575252_112617870
H1_mix_00087716	chr9	+	2214	5	FSM	ENSG00000119411.11	ENST00000462085.1	2213	5	-1	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	61.1023731126705	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATGTTCTTTGTTGATA	-11	True	NA	26	True	ATTAAA	-25	NA	113349540	113371233	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_113349781_113354239_113354339_113360506_113360738_113362368_113362395_113369615
H1_mix_00087717	chr9	+	3534	5	ISM	ENSG00000119411.11	ENST00000374183.5	2328	6	26	0	25	0	intron_retention	FALSE	canonical	3	134	junction_3	15.0228991875736	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGATTTATTCCATGTT	15	True	NA	15	True	ATTAAA	-14	NA	113349566	113371222	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_113349781_113354239_113354339_113360506_113360738_113362368_113362395_113368258
H1_mix_00087718	chr9	+	272	4	FSM	ENSG00000138835.22	ENST00000466735.5	892	4	620	0	186	0	multi-exon	FALSE	canonical	3	15	junction_2	3.55902608401044	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGAGGAGAGCTGCTGAG	NA	False	NA	NA	False	NA	NA	NA	113479490	113485691	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_113479542_113483058_113483118_113484137_113484233_113485624
H1_mix_00087720	chr9	+	6871	61	NNC	ENSG00000196739.15	novel	7813	61	NA	NA	-57	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	26.5546135351279	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAGAAAAAAGG	1330	False	NA	NA	False	NA	NA	NA	114155479	114311528	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_114156013_114162714_114162786_114167688_114169464_114178290_114178345_114183021_114183076_114194403_114194458_114195958_114196013_114205101_114205147_114205758_114205813_114206251_114206297_114209674_114209729_114210981_114211019_114219790_114219845_114222222_114222268_114231078_114231133_114231821_114231859_114235598_114235653_114236980_114237035_114237661_114237716_114240219_114240274_114240433_114240488_114242186_114242232_114243506_114243561_114245865_114245911_114250614_114250669_114252592_114252647_114252878_114252933_114258540_114258595_114264354_114264409_114264923_114264969_114265065_114265111_114265421_114265476_114266564_114266619_114267503_114267558_114269240_114269295_114270727_114270782_114275660_114275769_114282276_114282331_114282456_114282565_114283708_114283763_114284723_114284778_114288454_114288512_114288701_114288756_114288913_114288968_114289241_114289296_114290057_114290112_114290223_114290332_114290809_114290918_114292102_114292211_114300069_114300124_114300624_114300688_114301071_114301126_114301283_114301320_114301444_114301463_114301681_114301718_114302081_114302109_114304607_114304674_114306519_114306689_114307668_114307779_114309259_114309479_114310548
H1_mix_00087721	chr9	+	7835	61	FSM	ENSG00000196739.15	ENST00000356083.8	7813	61	-22	0	-22	0	multi-exon	FALSE	canonical	2	5	junction_2	26.3464682431799	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACACGCCTGTGGTCCCGT	14	True	NA	30	True	AATAAA	-24	NA	114155514	114312511	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_114156013_114162714_114162786_114167688_114169464_114178290_114178345_114183021_114183076_114194403_114194458_114195958_114196013_114205101_114205147_114205758_114205813_114206251_114206297_114209674_114209729_114210981_114211027_114219790_114219845_114222222_114222268_114231078_114231133_114231821_114231867_114235598_114235653_114236980_114237035_114237661_114237716_114240219_114240274_114240433_114240488_114242186_114242232_114243506_114243561_114245865_114245911_114250614_114250669_114252592_114252647_114252878_114252933_114258540_114258595_114264354_114264409_114264923_114264969_114265065_114265111_114265421_114265476_114266564_114266619_114267503_114267558_114269240_114269295_114270727_114270782_114275660_114275769_114282276_114282331_114282456_114282565_114283708_114283763_114284723_114284778_114288454_114288512_114288701_114288756_114288913_114288968_114289241_114289296_114290057_114290112_114290223_114290332_114290809_114290918_114292102_114292211_114300069_114300124_114300624_114300688_114301071_114301126_114301283_114301320_114301444_114301463_114301681_114301718_114302081_114302109_114304607_114304674_114306519_114306689_114307668_114307779_114309259_114309479_114310548
H1_mix_00087722	chr9	+	3168	3	FSM	ENSG00000196739.15	ENST00000468565.1	1946	3	-235	-987	-235	4	multi-exon	FALSE	canonical	3	75	junction_2	12.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGCCTGTGGTCCCGTGCTG	NA	False	NA	34	True	AATAAA	-28	NA	114306796	114312515	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_114307779_114309259_114309479_114310548
H1_mix_00087723	chr9	+	1136	3	FSM	ENSG00000136888.8	ENST00000677115.1	1136	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1321.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTTTTTTCCCTGTCT	131	False	NA	30	True	AGTAAA	-26	NA	114587705	114598384	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_114587921_114592551_114592658_114597569
H1_mix_00087724	chr9	+	1274	1	Intergenic	novelGene_1596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTGAATACTAGCAGCCT	6354	False	NA	NA	False	TATAAA	-5	NA	115839191	115840465	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_115839200_115840500
H1_mix_00087725	chr9	+	1261	1	Intergenic	novelGene_1598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAGTGGGGTAAGGGTGA	7854	False	NA	NA	False	TTTAAA	-26	NA	115840691	115841952	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_115840700_115842000
H1_mix_00087726	chr9	+	343	3	Intergenic	novelGene_1599	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACCACCAAATAGGCTTTG	NA	False	NA	NA	False	NA	NA	NA	118451477	118490967	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_118451489_118479884_118479892_118490642
H1_mix_00087727	chr9	+	2195	3	NNC	ENSG00000214654.9	novel	3856	3	NA	NA	48	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	7	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGCTATTGTGTTGTTTG	81	False	NA	9	True	AATAAA	-26	NA	120793550	120801779	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_120793923_120798574_120800245_120801626
H1_mix_00087728	chr9	+	709	3	FSM	ENSG00000226752.10	ENST00000640391.2	2751	3	-2	2044	-2	-8	multi-exon	FALSE	canonical	2	3	junction_1	15	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATCTCTGGATTTCATGT	94	False	NA	NA	False	NA	NA	NA	120842993	120851440	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_120843440_120847293_120847354_120851237
H1_mix_00087729	chr9	+	6262	4	NNC	ENSG00000226752.10	novel	679	5	NA	NA	-5	-20	intron_retention	FALSE	canonical	0	0	junction_2	14.3527000944073	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAATAAGTTAACAGTCTG	0	True	NA	NA	False	AATAAA	-10	NA	120843094	120854365	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_120844900_120844992_120845650_120846681_120847354_120851237
H1_mix_00087739	chr9	+	6534	14	ISM	ENSG00000136848.18	ENST00000408936.7	6784	16	47569	2	-37988	0	3prime_fragment	FALSE	canonical	3	60	junction_9	10.6309807392963	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCGACTCGTGTCTCCA	-14	True	NA	23	True	ATTAAA	-19	NA	121699162	121785528	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_121699459_121757012_121757167_121758897_121758997_121759884_121760440_121763504_121763650_121763734_121763880_121766493_121766731_121768431_121768634_121770545_121770725_121772606_121773496_121774259_121774413_121776197_121776392_121781463_121781552_121782330
H1_mix_00087741	chr9	+	1841	6	FSM	ENSG00000148187.18	ENST00000297908.7	1841	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	54.3197938140417	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCTGACTTCTTTTCTT	NA	False	NA	12	True	AATAAA	-23	NA	122264602	122323461	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_122264939_122270863_122271076_122285168_122285288_122291748_122291841_122313226_122313387_122322539
H1_mix_00087746	chr9	+	1599	8	FSM	ENSG00000148187.18	ENST00000489572.5	1599	8	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	58.7523338659315	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTTGGTCTGGATTGAT	11	False	NA	NA	False	AATAAA	-43	NA	122270847	122323088	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_122271076_122280442_122280599_122285168_122285288_122285779_122285947_122286038_122286167_122291748_122291841_122313226_122313387_122322539
H1_mix_00087747	chr9	+	914	1	FSM	ENSG00000261094.2	ENST00000566531.1	914	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAACCTTGTCCATTTCTG	7727	False	NA	25	True	AATAAA	-27	NA	122939419	122940333	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_122939400_122940300
H1_mix_00087748	chr9	+	4967	26	NIC	ENSG00000011454.18	novel	4986	26	NA	NA	-1	-2	combination_of_known_splicesites	FALSE	canonical	3	81	junction_1	34.3537829066902	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGCATTGCTTTGTAAAA	1	True	NA	75	True	ATTAAA	-17	NA	122941031	123104864	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_122941089_122957010_122957210_122984484_122984720_122986214_122986420_122989296_122989472_122990055_122990214_122996040_122996152_122996538_122996606_122997258_122997362_122998596_122998767_123010353_123010529_123015542_123015637_123020308_123020460_123065347_123065462_123070349_123070425_123073551_123073678_123074284_123074429_123076244_123076287_123076633_123076763_123089757_123089851_123090274_123090386_123097740_123097846_123098714_123098799_123099477_123099550_123101565_123101764_123103090
H1_mix_00087749	chr9	+	3664	10	FSM	ENSG00000148204.12	ENST00000359999.7	3659	10	-6	1	-6	-1	multi-exon	FALSE	canonical	1	2	junction_7	3.64471543707927	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCAGTTAGCCTGGAATT	-3	True	NA	2	True	GATAAA	-28	NA	123356163	123374098	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_123356355_123362864_123363189_123365916_123366113_123366226_123366367_123367171_123367358_123367572_123367687_123370107_123370981_123371069_123371579_123372176_123372343_123373133
H1_mix_00087750	chr9	+	1298	1	FSM	ENSG00000232630.1	ENST00000430496.1	937	1	26	-387	26	387	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGTGAGCAGTTCTCC	NA	False	NA	NA	False	NA	NA	NA	125150678	125151976	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_125150700_125152000
H1_mix_00087751	chr9	+	1220	8	FSM	ENSG00000136933.17	ENST00000259460.12	1313	8	-7	100	-7	-100	multi-exon	FALSE	canonical	3	32	junction_4	109.687868843499	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTCTGCATTATATATC	-1	True	NA	13	True	AGTAAA	-27	NA	125200534	125234058	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_125200578_125200779_125200907_125203007_125203067_125207563_125207722_125220538_125220701_125227909_125228060_125232595_125232746_125233687
H1_mix_00087752	chr9	+	1821	8	FSM	ENSG00000165219.23	ENST00000394084.5	3190	8	-16	1385	3	-1385	multi-exon	FALSE	canonical	3	18	junction_2	71.239750426404	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTAATATTTCATTAGCC	-7	True	NA	NA	False	NA	NA	NA	125261812	125307915	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_125261960_125268935_125268985_125295457_125295575_125298889_125299107_125301982_125302827_125305062_125305150_125307412_125307548_125307690
H1_mix_00087755	chr9	+	9188	28	FSM	ENSG00000165219.23	ENST00000297933.11	9176	28	-13	1	3	-1	multi-exon	FALSE	canonical	3	18	junction_2	45.183576170502	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTATGTTTCTGTCATCT	-7	True	NA	22	True	ATTAAA	-26	NA	125261812	125367206	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_125261960_125268935_125268985_125295457_125295575_125298889_125299107_125301982_125302827_125305062_125305150_125307412_125307548_125307690_125307881_125312451_125312613_125321432_125321563_125323797_125323924_125326415_125326590_125330077_125330219_125331925_125332061_125332509_125332630_125337017_125337096_125337220_125337592_125341176_125341265_125342218_125342300_125346818_125346942_125349389_125349520_125350294_125350405_125350712_125350873_125354653_125354842_125355643_125355858_125359419_125359493_125360527_125360726_125362605
H1_mix_00087758	chr9	+	6782	26	NIC	ENSG00000165219.23	novel	5207	27	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	49	junction_8	32.9888708506369	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCGGGGCTCTTTTCTGTGG	-26	True	NA	10	True	AATAAA	-21	NA	125261793	125365010	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_125261960_125298889_125299107_125301982_125302827_125305062_125305150_125307412_125307548_125307690_125307881_125312451_125312613_125321432_125321500_125323797_125323924_125326415_125326590_125330077_125330219_125331925_125332061_125332509_125332630_125337017_125337096_125337220_125337592_125341176_125341265_125342218_125342300_125346818_125346942_125349389_125349520_125350294_125350405_125350712_125350873_125354653_125354842_125355643_125355858_125359419_125359493_125360527_125360726_125362605
H1_mix_00087760	chr9	+	960	1	FSM	ENSG00000214761.3	ENST00000444886.1	960	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACTGCCAGCAAACAAAGC	NA	False	NA	NA	False	NA	NA	NA	125595668	125596628	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_125595700_125596600
H1_mix_00087763	chr9	+	6786	3	NNC	ENSG00000177125.5	novel	6564	2	NA	NA	-101	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	10	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGTGGTCTCCCTCTG	NA	False	NA	33	True	AATAAA	-18	NA	126860563	126885878	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_126860740_126863591_126863713_126879389
H1_mix_00087771	chr9	+	4228	24	NNC	ENSG00000136895.19	novel	3143	27	NA	NA	-10	-1721	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	9.6357086354545	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATGTGGAGGAATTTTT	-35	True	NA	NA	False	AATAAA	-18	NA	127225228	127367397	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_127225404_127243078_127243254_127264951_127265022_127291167_127291243_127311635_127311736_127313440_127313560_127318062_127318128_127320714_127320779_127325068_127325096_127332273_127332350_127333022_127333122_127335229_127335334_127336127_127336237_127338115_127338162_127339644_127339752_127342218_127342335_127344234_127344340_127345402_127345478_127353845_127353945_127354293_127354411_127355296_127355473_127357218_127357378_127365299_127365367_127365494
H1_mix_00087772	chr9	+	653	7	FSM	ENSG00000136895.19	ENST00000441134.5	653	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	10.2577883689527	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTTCTAATGGGTAGAA	6	True	NA	NA	False	NA	NA	NA	127225354	127318127	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127225404_127243078_127243254_127264951_127265022_127291167_127291243_127311635_127311736_127313440_127313560_127318062
H1_mix_00087773	chr9	+	649	8	FSM	ENSG00000136895.19	ENST00000495172.1	737	8	88	0	88	0	multi-exon	FALSE	canonical	3	20	junction_4	6.13787173112595	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCACTTTACACGTATCC	NA	False	NA	NA	False	NA	NA	NA	127313440	127336222	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127313560_127318062_127318128_127320714_127320779_127325068_127325096_127332273_127332350_127333022_127333122_127335229_127335334_127336127
H1_mix_00087774	chr9	+	569	6	FSM	ENSG00000136895.19	ENST00000460176.6	569	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	6.82934843158555	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAGAATTCCAGTACATC	NA	False	NA	NA	False	NA	NA	NA	127342314	127355449	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127342335_127344234_127344340_127345402_127345478_127353845_127353945_127354293_127354411_127355296
H1_mix_00087775	chr9	+	1085	6	NIC	ENSG00000136856.18	novel	1937	9	NA	NA	-6	-121	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	101.138321125081	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCTCTAGGATCTTTGT	9	False	NA	NA	False	ACTAAA	-17	NA	127397148	127407531	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_127397287_127399906_127400007_127403659_127403804_127403958_127404068_127404817_127404992_127407111
H1_mix_00087776	chr9	+	1961	9	FSM	ENSG00000136856.18	ENST00000373360.7	1937	9	-24	0	0	0	multi-exon	FALSE	canonical	3	43	junction_8	59.8810017868773	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTTTGTTCTGTTGACT	-1	True	NA	NA	False	AATAAA	-34	NA	127397206	127407898	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127397287_127397375_127397539_127397904_127398112_127399906_127400007_127402556_127402754_127403659_127403804_127403958_127404068_127404817_127404992_127407111
H1_mix_00087778	chr9	+	3130	26	FSM	ENSG00000148356.15	ENST00000675641.1	3130	26	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_17	32.8097546470558	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGCCTGAGTCATCAC	-12	True	NA	24	True	AATAAA	-16	NA	127451504	127503499	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127451670_127451928_127452085_127454495_127454600_127454997_127455055_127455575_127455621_127457315_127457394_127459002_127459072_127461172_127461258_127462251_127462374_127467739_127467831_127473800_127473932_127478933_127478964_127479382_127479506_127479838_127479979_127481182_127481228_127482949_127483021_127485735_127485841_127487675_127487764_127489443_127489519_127491214_127491296_127492801_127492898_127495319_127495419_127495963_127496096_127497252_127497335_127501009_127501144_127502773
H1_mix_00087779	chr9	+	3180	24	FSM	ENSG00000148356.15	ENST00000675883.1	3180	24	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_18	35.9316195772503	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCGCTTCTGGCCTGAGT	66	False	NA	18	True	AATAAA	-10	NA	127451621	127503493	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127452085_127454495_127454600_127454997_127455055_127455575_127455621_127457315_127457394_127459002_127459072_127461172_127461258_127462251_127462374_127467739_127467831_127473800_127473932_127478933_127478964_127479382_127479506_127479838_127479979_127481182_127481228_127482949_127483021_127485735_127485836_127487675_127487764_127489443_127489519_127492801_127492898_127495319_127495419_127495963_127496096_127497252_127497335_127501009_127501144_127502773
H1_mix_00087783	chr9	+	591	2	FSM	ENSG00000136854.24	ENST00000496504.3	591	2	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACATGTTCCTCAGATTTT	2727	False	NA	NA	False	GATAAA	-25	NA	127661132	127663722	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127661206_127663204
H1_mix_00087784	chr9	+	2238	14	FSM	ENSG00000136877.15	ENST00000393706.6	2230	14	-8	0	-8	0	multi-exon	FALSE	canonical	2	22	junction_5	163.357016356505	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGACCCCCTGCTCCCT	NA	False	NA	28	True	ATTAAA	-40	NA	127802849	127814081	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127803063_127804284_127804414_127804498_127804553_127804635_127804701_127806972_127807088_127807420_127807483_127807585_127807689_127808233_127808312_127808557_127808706_127808799_127808890_127809683_127809835_127810030_127810107_127810944_127811012_127813194
H1_mix_00087791	chr9	+	625	4	FSM	ENSG00000148346.12	ENST00000494317.1	625	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	2.82842712474619	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGAGTCTACACTGTTT	-9	True	NA	4	True	AATAAA	-15	NA	128151668	128153453	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128151718_128151905_128152026_128152182_128152285_128153099
H1_mix_00087793	chr9	+	5369	13	NIC	ENSG00000106976.21	novel	3254	23	NA	NA	-1415	0	intron_retention	FALSE	canonical	3	82	junction_4	107.820162771163	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCCTCTGCTGGTTGTG	8677	False	NA	23	True	AATAAA	-24	NA	128231220	128255244	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_128234108_128239444_128239516_128239727_128239780_128239984_128239997_128240426_128240533_128242231_128242346_128246393_128246504_128247374_128247487_128248582_128248754_128250114_128250357_128250724_128250941_128253100_128253138_128254005
H1_mix_00087794	chr9	+	5332	12	NIC	ENSG00000106976.21	novel	3835	21	NA	NA	-1415	0	intron_retention	FALSE	canonical	3	33	junction_3	127.160859927576	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCCTCTGCTGGTTGTG	8677	False	NA	23	True	AATAAA	-24	NA	128231220	128255244	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_128234108_128239444_128239516_128239727_128239780_128240426_128240533_128242231_128242346_128246393_128246504_128247374_128247487_128247923_128247936_128248582_128248754_128250114_128250357_128250724_128250941_128254005
H1_mix_00087795	chr9	+	5329	12	NIC	ENSG00000106976.21	novel	3217	22	NA	NA	-1415	0	intron_retention	FALSE	canonical	3	55	junction_11	126.856722719663	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCCTCTGCTGGTTGTG	8677	False	NA	23	True	AATAAA	-24	NA	128231220	128255244	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_128234108_128239444_128239516_128239727_128239780_128239984_128239997_128240426_128240533_128242231_128242346_128246393_128246504_128247374_128247487_128248582_128248754_128250114_128250357_128250724_128250941_128254008
H1_mix_00087797	chr9	+	451	5	FSM	ENSG00000175854.14	ENST00000495313.5	466	5	15	0	15	0	multi-exon	FALSE	canonical	2	14	junction_1	92.5337776166087	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCACAGCTCCCAGGGAC	29	False	NA	NA	False	NA	NA	NA	128275393	128288733	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128275497_128276706_128276756_128284509_128284632_128285938_128286034_128288651
H1_mix_00087798	chr9	+	857	1	FSM	ENSG00000223551.1	ENST00000323496.5	618	1	-133	-106	-133	106	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTATGAGACGAGAACCAG	1316	False	NA	NA	False	NA	NA	NA	128342019	128342876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128342000_128342900
H1_mix_00087800	chr9	+	1035	6	FSM	ENSG00000136811.17	ENST00000469582.6	1054	6	19	0	-9	0	multi-exon	FALSE	canonical	3	16	junction_1	25.796123739818	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGCCCCGGGCTTCAGTT	38	False	NA	NA	False	NA	NA	NA	128456119	128469470	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128456256_128457197_128457438_128459566_128459658_128460512_128460667_128460941_128461068_128469182
H1_mix_00087806	chr9	+	3040	13	FSM	ENSG00000119392.16	ENST00000684139.1	3060	13	20	0	9	0	multi-exon	FALSE	canonical	1	1	junction_3	30.8368241267194	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGAAAGACACAATAGGCC	25	True	NA	NA	False	ATTAAA	-4	NA	128504745	128542518	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128504905_128508875_128509098_128515528_128515640_128525191_128525424_128527178_128527292_128527455_128527526_128533512_128533656_128533760_128533952_128536354_128536485_128537985_128538091_128539615_128539699_128540274_128540339_128541101
H1_mix_00087811	chr9	+	5750	21	NIC	ENSG00000160447.7	novel	3393	22	NA	NA	6	0	intron_retention	FALSE	canonical	3	138	junction_11	11.5887876846545	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACTGGCAGCAGCCTGGG	-2	True	NA	27	True	ATTAAA	-13	NA	128702508	128720916	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_128705544_128705733_128705880_128706712_128706825_128706895_128707024_128707221_128707406_128713051_128713199_128713277_128713388_128713498_128713643_128714045_128714122_128714196_128714366_128714561_128714665_128714797_128714866_128715171_128715236_128715368_128715461_128716746_128716924_128718324_128718388_128718548_128718626_128719685_128719829_128719909_128720018_128720202_128720284_128720393
H1_mix_00087812	chr9	+	2973	22	NNC	ENSG00000160447.7	novel	3393	22	NA	NA	376	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_21	32.6119213626855	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACTGGCAGCAGCCTGGG	18	False	NA	27	True	ATTAAA	-13	NA	128702878	128720916	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_128702940_128705302_128705544_128705733_128705880_128706712_128706825_128706895_128707024_128707221_128707406_128713051_128713199_128713277_128713388_128713498_128713643_128714045_128714122_128714196_128714366_128714561_128714665_128714797_128714866_128715171_128715236_128715368_128715461_128716746_128716924_128718324_128718388_128718548_128718626_128719685_128719829_128719909_128720018_128720202_128720240_128720393
H1_mix_00087815	chr9	+	1303	9	NIC	ENSG00000175287.19	novel	1599	12	NA	NA	184	0	intron_retention	FALSE	canonical	3	13	junction_7	31.0724958765787	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCCTACTGAGCCTTCT	127	False	NA	21	True	AATAAA	-18	NA	128921931	128942038	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_128922048_128922282_128922357_128927037_128927197_128933781_128933858_128934010_128934059_128936447_128936504_128936582_128936646_128940598_128940716_128941444
H1_mix_00087820	chr9	+	4251	16	NIC	ENSG00000148343.19	novel	4345	17	NA	NA	-4	0	combination_of_known_junctions	TRUE	canonical	3	64	junction_1	19.5736784710715	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTTCCACTTTGCCAT	-10	True	NA	17	True	AATAAA	-12	NA	129036616	129072071	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_129036682_129040451_129040691_129042303_129042515_129048426_129048540_129049380_129049499_129049826_129049964_129059153_129059272_129060549_129060651_129061230_129061347_129063243_129063317_129063544_129063632_129067772_129067872_129068197_129068976_129069075_129069130_129069848_129069966_129070246
H1_mix_00087821	chr9	+	2664	11	FSM	ENSG00000119383.21	ENST00000358994.9	2664	11	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	196.123456016867	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTGTGAGGTATGTCT	-2	True	NA	24	True	ATTAAA	-20	NA	129110949	129148944	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129111033_129111471_129111632_129120512_129120611_129123051_129123139_129128984_129129111_129131521_129131640_129134794_129134895_129136470_129136596_129137591_129137693_129142444_129142553_129147386
H1_mix_00087822	chr9	+	2649	9	FSM	ENSG00000119383.21	ENST00000357197.8	2653	9	4	0	4	0	multi-exon	FALSE	canonical	3	42	junction_2	204.63439196528	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGAGGTATGTCTT	-10	True	NA	25	True	ATTAAA	-21	NA	129111317	129148945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129111632_129120512_129120611_129128984_129129111_129131521_129131640_129134794_129134895_129136470_129136596_129137591_129137693_129142444_129142553_129147386
H1_mix_00087827	chr9	+	486	1	FSM	ENSG00000268707.1	ENST00000600965.1	507	1	35	-14	35	14	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGCATTTTTGAACTTG	NA	False	NA	NA	False	AATAAA	-34	NA	129170468	129170954	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129170500_129171000
H1_mix_00087828	chr9	+	1068	4	FSM	ENSG00000233901.7	ENST00000654190.1	902	4	-182	16	-68	-1	multi-exon	FALSE	canonical	0	0	junction_2	4.54606056566195	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTCTTTCAGCATTTC	1295	False	NA	8	True	ATTAAA	-13	NA	129333704	129347461	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129334199_129338791_129338918_129341831_129342044_129347225
H1_mix_00087829	chr9	+	1112	4	FSM	ENSG00000233901.7	ENST00000654735.1	1112	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	3.2659863237109	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCCCTTGTTGCCGTGTG	1363	False	NA	24	True	ATTAAA	-29	NA	129333772	129347477	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129334199_129338791_129338918_129341735_129342044_129347225
H1_mix_00087830	chr9	+	1491	4	FSM	ENSG00000148335.15	ENST00000481189.1	576	4	-41	-874	-19	0	multi-exon	FALSE	canonical	3	82	junction_2	225.767333529209	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCACTTTGGGAGGCCG	NA	False	NA	NA	False	AATAAA	-34	NA	129626133	129636131	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129626296_129632649_129632802_129634053_129634307_129635207
H1_mix_00087831	chr9	+	1072	3	FSM	ENSG00000148335.15	ENST00000482347.1	1072	3	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	212.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGATGGTGCTGTGGGGTG	28	False	NA	NA	False	NA	NA	NA	129626199	129635930	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129626296_129634053_129634307_129635207
H1_mix_00087833	chr9	+	4480	25	FSM	ENSG00000136878.14	ENST00000315480.9	4470	25	-10	0	-10	0	multi-exon	FALSE	canonical	3	52	junction_1	20.4137753054701	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACGGCCACACAGTCGTC	-12	True	NA	13	True	AATAAA	-16	NA	129835447	129881828	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129835500_129849812_129849925_129852539_129852637_129856306_129856361_129858049_129858113_129858466_129858599_129860936_129861034_129861542_129861613_129863185_129863300_129865302_129865382_129868004_129868450_129868861_129869003_129869309_129869426_129869671_129869845_129870452_129870548_129873481_129873516_129873698_129873745_129874575_129874757_129874828_129874956_129875309_129875480_129875559_129875642_129876129_129876239_129878337_129878441_129879572_129879645_129880112
H1_mix_00087839	chr9	+	5011	8	FSM	ENSG00000130713.17	ENST00000372351.7	1885	8	-46	-3080	-16	653	multi-exon	FALSE	canonical	2	9	junction_3	67.4939150696459	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGGAGTGCAGTGGCGT	3430	False	NA	NA	False	NA	NA	NA	130693739	130707941	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_130693914_130695491_130695594_130697581_130697628_130699328_130699395_130700866_130700936_130702133_130702311_130703052_130703182_130703693
H1_mix_00087840	chr9	+	699	5	FSM	ENSG00000130713.17	ENST00000463488.1	699	5	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_2	7.22841614740048	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAGAAGGTGTTGTTCAC	33	False	NA	NA	False	NA	NA	NA	130693805	130699681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_130693914_130695491_130695594_130697581_130697628_130698161_130698252_130699328
H1_mix_00087841	chr9	+	532	2	FSM	ENSG00000097007.19	ENST00000393293.4	532	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTTGGAACTCCAAGGAAAA	99	False	NA	NA	False	NA	NA	NA	130713979	130854122	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_130714456_130854066
H1_mix_00087843	chr9	+	3654	7	FSM	ENSG00000126878.13	ENST00000372309.7	3515	7	-56	-83	-56	83	multi-exon	FALSE	canonical	0	0	junction_3	610.171742672139	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCTTTTGTCTGAGACA	NA	False	NA	15	True	ATTAAA	-12	NA	131096419	131123235	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131096661_131096801_131096864_131106187_131106266_131111596_131111664_131114576_131114619_131117755_131117919_131120234
H1_mix_00087846	chr9	+	6563	34	NIC	ENSG00000126883.18	novel	7568	36	NA	NA	-98	0	intron_retention	FALSE	canonical	3	28	junction_26	39.4838833343285	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTATGTGGGTTTTTTCAGA	2506	False	NA	13	True	ATTAAA	-21	NA	131125487	131233707	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_131125750_131127523_131127720_131128331_131128484_131129278_131129478_131130765_131130837_131132595_131132660_131133105_131133210_131134897_131135005_131135939_131136007_131139280_131139408_131140548_131140711_131144279_131144755_131146128_131146305_131147489_131147585_131150323_131150411_131150615_131150766_131151735_131151895_131159382_131159487_131162990_131163174_131163869_131163956_131164060_131164145_131174054_131174319_131175459_131175622_131178310_131178411_131187288_131187365_131189052_131189132_131197215_131199016_131201646_131201718_131215211_131215369_131222777_131222931_131228159_131228332_131230629_131230770_131232283_131232309_131233453
H1_mix_00087851	chr9	+	972	2	FSM	ENSG00000160539.6	ENST00000372261.1	972	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCAGTCTGGAGGCTCTA	0	True	NA	NA	False	AATAAA	-22	NA	131289811	131291445	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131290449_131291110
H1_mix_00087852	chr9	+	227	2	FSM	ENSG00000288701.1	ENST00000682525.1	266	2	39	0	39	0	multi-exon	FALSE	canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGCCCAGGGTTGAAGG	17	True	NA	NA	False	TATAAA	-32	NA	131373674	131430259	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131373732_131430089
H1_mix_00087853	chr9	+	11235	32	NNC	ENSG00000288701.1	novel	11253	32	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_26	94.1239911095643	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAAAGTTTAAAAA	46	False	NA	-9	True	NA	NA	NA	131394040	131500171	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_131394264_131430089_131430260_131432616_131432795_131436619_131436723_131438988_131439062_131444184_131444329_131446400_131446643_131447084_131447207_131447661_131447805_131455075_131455167_131459169_131459357_131464762_131465079_131467562_131467754_131470787_131470984_131473507_131473725_131474453_131476536_131477743_131477950_131478473_131478620_131479251_131479394_131481725_131481809_131482373_131482563_131482709_131482908_131483358_131483446_131484685_131484791_131484947_131485141_131486084_131486183_131486480_131486542_131487166_131487295_131487855_131488097_131491424_131491581_131492168_131492261_131495739
H1_mix_00087854	chr9	+	9049	30	NIC	ENSG00000288701.1	novel	11238	32	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	78.3552536773044	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAAAGTTTAAAAA	0	True	NA	-9	True	NA	NA	NA	131394085	131500171	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_131394264_131430093_131430260_131432616_131432795_131436619_131436723_131438988_131439062_131444184_131444329_131446400_131446643_131447084_131447207_131447661_131447805_131455075_131455167_131459163_131459357_131464762_131465079_131467562_131467754_131470787_131470984_131473507_131473725_131477743_131477950_131478473_131478620_131479251_131479394_131481725_131481809_131482373_131482563_131482709_131482908_131483358_131483446_131484685_131484791_131484947_131485141_131486084_131486183_131487166_131487295_131487855_131488097_131491424_131491581_131492168_131492261_131495739
H1_mix_00087855	chr9	+	4702	18	FSM	ENSG00000130714.19	ENST00000684579.1	4705	18	3	0	3	0	multi-exon	FALSE	canonical	2	7	junction_8	42.4622771727914	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCAACTGGCGTTTGTAG	-41	True	NA	2	True	ATTAAA	-5	NA	131502924	131523787	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131503074_131504188_131504341_131506113_131506221_131506402_131506454_131507367_131509023_131509742_131509809_131509902_131510416_131511336_131511473_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
H1_mix_00087858	chr9	+	2656	17	NIC	ENSG00000130714.19	novel	3057	20	NA	NA	6	0	intron_retention	FALSE	canonical	1	1	junction_9	47.6644767489375	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGCGTTTGTAGTTGGTG	-5	True	NA	8	True	ATTAAA	-11	NA	131502960	131523793	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_131503074_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131509997_131510259_131510416_131511336_131511468_131512040_131512137_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
H1_mix_00087861	chr9	+	4403	8	FSM	ENSG00000196358.12	ENST00000393229.4	4673	8	79	191	79	-191	multi-exon	FALSE	canonical	1	2	junction_5	1.4142135623731	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTTATTTATCTACTTA	82	False	NA	NA	False	NA	NA	NA	132162136	132244335	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_132162240_132166348_132167045_132197965_132198610_132226848_132227022_132230571_132230596_132239103_132239272_132240909_132241045_132241875
H1_mix_00087862	chr9	+	1724	6	FSM	ENSG00000188523.9	ENST00000393216.3	1725	6	0	1	0	1	multi-exon	FALSE	canonical	2	5	junction_3	3.54400902933387	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTGTGTCTCCATTTGA	1	True	NA	17	True	ATTAAA	-19	NA	132410210	132573318	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_132410467_132498694_132498795_132499371_132499601_132537600_132537707_132542945_132543048_132572387
H1_mix_00087866	chr9	+	2117	12	FSM	ENSG00000148308.18	ENST00000372108.9	2110	12	-7	0	0	0	multi-exon	FALSE	canonical	3	99	junction_9	160.067599356136	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTTGGTTTCTTGGTGT	-1	True	NA	25	True	ATTAAA	-14	NA	133030996	133058501	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_133031165_133042086_133042307_133043727_133043927_133050782_133050979_133052059_133052165_133053827_133053943_133054407_133054489_133054711_133054810_133054943_133054965_133056011_133056095_133056765_133056909_133057813
H1_mix_00087869	chr9	+	1164	7	FSM	ENSG00000148303.17	ENST00000463740.5	1164	7	0	0	0	0	multi-exon	FALSE	canonical	3	2639	junction_1	972.771470250507	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGTCTGTTGAGTATC	7	True	NA	24	True	CATAAA	-31	NA	133348217	133351426	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_133348247_133348921_133349043_133349550_133349701_133349911_133350053_133350239_133350728_133351001_133351072_133351261
H1_mix_00087870	chr9	+	886	8	NNC	ENSG00000148303.17	novel	887	8	NA	NA	0	22512	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1848.7030202666	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAAACAGTATGTGAAG	621	False	NA	NA	False	AAAAAG	-3	NA	133348921	133373938	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_133349043_133349550_133349701_133349911_133350053_133350239_133350320_133350596_133350728_133351001_133351072_133351261_133351424_133373907
H1_mix_00087872	chr9	+	1074	5	FSM	ENSG00000160323.19	ENST00000371910.1	1074	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	14.4460202131937	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGCGTTTTTTTCTTATAA	NA	False	NA	13	True	AATAAA	-18	NA	133455647	133459386	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_133455800_133456068_133456216_133456542_133456720_133457909_133458095_133458973
H1_mix_00087873	chr9	+	5113	5	NNC	ENSG00000196422.11	novel	4951	4	NA	NA	20	-30	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	60.503615594442	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACATCGAAATAAACCTCT	10	True	NA	-14	True	NA	NA	NA	135479801	135488862	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_135480023_135482682_135482826_135483351_135483554_135483949_135484083_135484448
H1_mix_00087876	chr9	+	478	2	FSM	ENSG00000238058.2	ENST00000651515.1	665	2	-6	193	-6	-193	multi-exon	FALSE	canonical	0	0	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTATGAGGCCAGCATTA	634	False	NA	NA	False	CATAAA	-42	NA	135908457	135915933	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_135908789_135915786
H1_mix_00087877	chr9	+	4537	3	FSM	ENSG00000160360.13	ENST00000291775.3	2114	3	94	-2517	94	2513	multi-exon	FALSE	canonical	3	78	junction_1	8	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCTCGCCCGCCACACGG	157	False	NA	NA	False	NA	NA	NA	136355623	136362118	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136355847_136356341_136356551_136358013
H1_mix_00087882	chr9	+	2316	6	FSM	ENSG00000165688.12	ENST00000444897.2	2316	6	0	0	0	0	multi-exon	FALSE	canonical	3	930	junction_1	49.3558507170123	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACGGTGTTTTCCTTCTC	6533	False	NA	26	True	AATAAA	-18	NA	136417193	136423760	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136417215_136418016_136418110_136418554_136418674_136418827_136418919_136419043_136419107_136421831
H1_mix_00087883	chr9	+	2531	1	FSM	ENSG00000196366.3	ENST00000354376.3	2572	1	40	1	40	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCACCTGTTTCTTTTG	52	False	NA	18	True	ATTAAA	-19	NA	136483534	136486065	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136483500_136486100
H1_mix_00087884	chr9	+	3185	2	NNC	ENSG00000237886.1	novel	738	3	NA	NA	0	-174	intron_retention	FALSE	canonical	3	13	junction_1	0	21	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTATAAAGAACTTGGGAC	22	False	NA	-17	True	TTTAAA	-20	NA	136546211	136549719	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_136548809_136549131
H1_mix_00087886	chr9	+	627	2	FSM	ENSG00000213213.14	ENST00000609471.1	644	2	0	17	0	-17	multi-exon	FALSE	canonical	3	8	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGTATTGTTTGTATCT	440	False	NA	-11	True	ATTAAA	-3	NA	136799886	136800732	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136800170_136800388
H1_mix_00087887	chr9	+	2547	6	FSM	ENSG00000196642.19	ENST00000436380.5	2547	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	282.504230056826	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAGTCGTCAGATATTT	83	False	NA	20	True	AATAAA	-15	NA	136823525	136834340	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136823660_136825778_136825827_136828493_136828547_136829392_136829485_136831720_136831862_136832261
H1_mix_00087890	chr9	+	2841	15	NNC	ENSG00000127191.18	novel	680	6	NA	NA	-1186	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	123.110722522451	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTCAGTGGCATCCATT	1574	False	NA	12	True	ATTAAA	-14	NA	136888348	136926607	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_136888522_136889468_136889563_136889669_136889737_136890348_136890543_136898522_136898600_136898712_136898929_136899593_136899673_136900421_136900521_136908069_136908232_136909919_136909995_136916540_136916616_136920237_136920516_136921037_136921216_136923851_136924001_136925682
H1_mix_00087891	chr9	+	3039	13	NIC	ENSG00000127191.18	novel	680	6	NA	NA	-510	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	105.197829508661	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTCAGTGGCATCCATT	2250	False	NA	12	True	ATTAAA	-14	NA	136889024	136926607	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_136889563_136889669_136889737_136890348_136890543_136898712_136898929_136899593_136899673_136900421_136900521_136908069_136908232_136909919_136909995_136916540_136916616_136920233_136920516_136921037_136921216_136923851_136924001_136925682
H1_mix_00087892	chr9	+	5514	1	FSM	ENSG00000213590.2	ENST00000395082.2	1322	1	-5130	938	-5130	-938	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATGAACCTGGTAGGCAG	1345	False	NA	NA	False	NA	NA	NA	136930709	136936223	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136930700_136936200
H1_mix_00087893	chr9	+	784	7	NNC	ENSG00000148362.11	novel	808	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_6	132.62698317713	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGGTGGGGCTCTGAC	14	True	NA	23	True	AATAAA	-18	NA	136992441	136993976	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_136992563_136992639_136992701_136992924_136992975_136993052_136993244_136993342_136993412_136993579_136993665_136993769
H1_mix_00087895	chr9	+	2782	13	FSM	ENSG00000177239.16	ENST00000683324.1	2801	13	19	0	-5	0	multi-exon	FALSE	canonical	1	1	junction_3	90.3392910089514	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGATTTGCTCTAACC	969	False	NA	6	True	NA	NA	NA	137086888	137109165	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137087219_137088074_137088184_137088868_137089006_137096239_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106124_137106316_137106688_137106810_137107249_137107448_137107530_137107663_137108387
H1_mix_00087896	chr9	+	2770	13	FSM	ENSG00000177239.16	ENST00000683135.1	2755	13	-15	0	-5	0	multi-exon	FALSE	canonical	3	12	junction_10	88.1247537427607	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTAACCGCGATGTCGC	969	False	NA	16	True	GATAAA	-9	NA	137086888	137109175	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137087219_137088074_137088184_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106124_137106316_137106688_137106810_137107274_137107448_137107530_137107663_137108387
H1_mix_00087899	chr9	+	2872	13	FSM	ENSG00000177239.16	ENST00000684272.1	2852	13	-20	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	90.9902314659229	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCGATGTCGCCTGTGTCT	-10	True	NA	24	True	GATAAA	-17	NA	137086964	137109183	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137087364_137088074_137088184_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106124_137106316_137106688_137106810_137107249_137107448_137107530_137107663_137108387
H1_mix_00087900	chr9	+	4774	4	FSM	ENSG00000177239.16	ENST00000535028.6	4933	4	159	0	-77	0	multi-exon	FALSE	canonical	3	12	junction_2	152.735064736294	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAAAAGTTGATTTGCTCT	NA	False	NA	2	True	NA	NA	NA	137102824	137109161	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137106316_137106688_137106810_137107274_137107663_137108387
H1_mix_00087905	chr9	+	716	3	FSM	ENSG00000176101.12	ENST00000464553.2	723	3	0	7	0	-3	multi-exon	FALSE	canonical	3	41	junction_2	337	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATCCGTGCCAGCCTGC	-10	True	NA	11	True	AATAAA	-13	NA	137188705	137190363	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137188779_137189065_137189152_137189806
H1_mix_00087908	chr9	+	2521	14	FSM	ENSG00000188566.15	ENST00000371521.8	2497	14	-24	0	-14	0	multi-exon	FALSE	canonical	3	12	junction_12	35.9119567700405	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTAGCGCAGGCTTCCTT	-42	True	NA	27	True	AGTAAA	-21	NA	137205670	137217009	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137205913_137206231_137206310_137212501_137212600_137213779_137213879_137213966_137214069_137214203_137214414_137214569_137214692_137214797_137215019_137215094_137215203_137215406_137215522_137215658_137215806_137215898_137216018_137216066_137216189_137216271
H1_mix_00087910	chr9	+	781	9	FSM	ENSG00000188747.9	ENST00000683683.1	781	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	5.24404424085076	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGGCTCTAGACCCTT	140	False	NA	NA	False	NA	NA	NA	137423549	137433263	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137423707_137426247_137426331_137428032_137428142_137428881_137429017_137430783_137430844_137431074_137431101_137431235_137431342_137433028_137433075_137433204
H1_mix_00087911	chr9	+	876	10	ISM	ENSG00000188747.9	ENST00000683555.1	1614	14	4599	626	4442	517	internal_fragment	FALSE	canonical	2	2	junction_9	5.03567519716652	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCCATCCCCGAGGAGGA	4582	False	NA	NA	False	NA	NA	NA	137427991	137433780	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_137428142_137428881_137429017_137429275_137429384_137430783_137430844_137431074_137431101_137431235_137431342_137433028_137433075_137433204_137433264_137433452_137433608_137433749
H1_mix_00087913	chr9	+	564	5	FSM	ENSG00000197070.14	ENST00000431925.6	555	5	-9	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	111.162887242101	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGACGGGCAGCGTGGT	-1	True	NA	NA	False	NA	NA	NA	137605684	137614076	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137605836_137612895_137613007_137613459_137613511_137613614_137613770_137613980
H1_mix_00087916	chr9	+	2123	10	FSM	ENSG00000181090.21	ENST00000629335.2	3600	10	-8	1485	0	503	multi-exon	FALSE	canonical	3	215	junction_4	101.161159774459	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTCCCGTCTCTGCTGCCT	-4	True	NA	NA	False	NA	NA	NA	137619004	137763272	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137619050_137710966_137711031_137716625_137717183_137728348_137728530_137743370_137743529_137743901_137744091_137752330_137752409_137754170_137754292_137757879_137758012_137762674
H1_mix_00087924	chr9	+	7442	45	ISM	ENSG00000148408.14	ENST00000371363.5	9758	46	1297	1855	1178	590	3prime_fragment	FALSE	canonical	2	7	junction_1	6.47499960113595	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCCAGGTGGACGTAGACG	1154	False	NA	NA	False	NA	NA	NA	137879111	138122769	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_137879160_137882743_137882884_137913179_137913272_137914653_137914807_137917240_137917432_137952273_137952378_137955697_137955814_137956770_137956828_137957597_137957688_137971382_137971593_137975906_137976020_137984137_137984251_137986412_137986545_137986781_137986855_138006766_138006885_138010009_138010078_138013128_138013236_138023010_138023812_138024954_138025173_138043773_138043901_138046903_138047034_138047398_138047459_138049208_138049316_138052091_138052189_138053845_138054007_138057731_138057870_138058048_138058251_138058568_138058734_138059078_138059190_138059653_138059738_138073487_138073605_138074000_138074067_138075818_138075911_138078113_138078259_138096483_138096612_138102710_138102808_138105698_138105808_138112397_138112506_138114377_138114491_138115551_138115680_138117945_138118082_138118651_138118769_138120164_138120373_138120630_138120882_138121468
H1_mix_00087926	chr9	-	1969	11	NNC	ENSG00000181404.17	novel	1873	11	NA	NA	177	0	at_least_one_novel_splicesite	TRUE	canonical	2	11	junction_10	69.3749954954954	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAACGTCTCGGGGTCAG	NA	False	NA	40	True	AATAAA	-21	NA	29562	14474	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_14941_15080_15150_15908_16062_16717_16877_16968_17167_17343_17480_17718_17856_18027_18175_18380_18480_24850_25005_29311
H1_mix_00087929	chr9	-	2992	1	FSM	ENSG00000183784.7	ENST00000382387.4	2786	1	-617	411	-617	-411	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTGGATATAAAAAATATAT	9702	False	NA	NA	False	NA	NA	NA	216510	213518	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_213500_216500
H1_mix_00087930	chr9	-	640	4	Intergenic	novelGene_1513	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_2	7.87400787401181	176	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTAGCTTTGATTATATT	NA	False	NA	NA	False	TATAAA	-17	NA	2277999	2177924	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_-_2178221_2180836_2181023_2230580_2230689_2277949
H1_mix_00087931	chr9	-	887	4	FSM	ENSG00000236404.12	ENST00000453601.5	887	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	10.6144555520604	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGATTTCCTTATCTTC	NA	False	NA	0	True	AATAAA	-25	NA	2622373	2535651	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_2536016_2536358_2536454_2539398_2539553_2622099
H1_mix_00087933	chr9	-	245	1	FSM	ENSG00000236496.2	ENST00000411761.2	986	1	251	490	251	-490	mono-exon	FALSE	NA	NA	NA	NA	NA	344	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCCAGCAACTGCTTTTG	NA	False	NA	NA	False	NA	NA	NA	2876176	2875931	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_2875900_2876200
H1_mix_00087934	chr9	-	477	6	FSM	ENSG00000106686.17	ENST00000451763.6	4073	6	143	3453	51	-3453	multi-exon	FALSE	canonical	1	1	junction_2	3.54400902933387	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGTACAATACAAATCTA	267	False	NA	NA	False	NA	NA	NA	4666256	4629090	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_4629169_4635274_4635400_4646486_4646529_4656040_4656090_4661898_4662037_4666211
H1_mix_00087935	chr9	-	239	2	FSM	ENSG00000273061.2	ENST00000609131.2	256	2	21	-4	21	4	multi-exon	FALSE	canonical	3	28	junction_1	0	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGTGAAATCCTTATATCT	-11	True	NA	-1	True	AATAAA	-19	NA	4679471	4676595	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_4676750_4679386
H1_mix_00087936	chr9	-	6013	5	NNC	ENSG00000147853.17	novel	4219	5	NA	NA	13032	-25	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_4	102.842111996983	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAAACTGTCATGCCTA	3403	False	NA	-35	True	TATAAA	-25	NA	4728170	4709583	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_4713097_4718418_4718538_4719134_4719308_4722505_4722626_4726082
H1_mix_00087937	chr9	-	5376	7	NNC	ENSG00000147853.17	novel	4219	5	NA	NA	-82	-25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	127.855387058974	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAAACTGTCATGCCTA	719	False	NA	-35	True	TATAAA	-25	NA	4741309	4709583	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_4710393_4711156_4713097_4718418_4718538_4719134_4719308_4722505_4722626_4726082_4727925_4740936
H1_mix_00087938	chr9	-	3534	6	NNC	ENSG00000147853.17	novel	4219	5	NA	NA	-82	-25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	106.87300875338	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAAACTGTCATGCCTA	719	False	NA	-35	True	TATAAA	-25	NA	4741309	4709583	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_4710393_4711156_4713097_4718418_4718538_4719134_4719308_4722505_4722626_4740936
H1_mix_00087940	chr9	-	981	6	FSM	ENSG00000107020.10	ENST00000223864.7	981	6	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_3	42.218479366268	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATGCCCAGCTGCTCTC	-4	True	NA	-6	True	AATAAA	-20	NA	5437925	5357970	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_5358361_5361077_5361188_5361757_5361889_5431896_5431984_5436568_5436695_5437788
H1_mix_00087948	chr9	-	2690	16	FSM	ENSG00000178445.10	ENST00000640592.1	2828	16	138	0	99	0	multi-exon	FALSE	canonical	3	507	junction_2	44.4024023374111	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTCTTGTGGGAATTCTT	1026	False	NA	-1	True	AATAAA	-22	NA	6644692	6557665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_6558685_6565353_6565430_6587140_6587284_6588400_6588443_6588617_6588703_6589194_6589293_6592142_6592224_6592850_6592991_6595013_6595120_6602108_6602206_6604587_6604785_6605130_6605279_6606591_6606670_6610191_6610357_6620183_6620320_6644613
H1_mix_00087949	chr9	-	746	1	FSM	ENSG00000231381.2	ENST00000442955.2	1010	1	-303	567	-303	-567	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGAAGAAGGACTGAAGAT	NA	False	NA	NA	False	NA	NA	NA	6670311	6669565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_6669600_6670300
H1_mix_00087950	chr9	-	279	1	FSM	ENSG00000256968.1	ENST00000397592.3	279	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGATCAATGAAGTGAGA	8885	False	NA	NA	False	NA	NA	NA	6748981	6748702	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_6748700_6749000
H1_mix_00087951	chr9	-	584	1	FSM	ENSG00000273056.1	ENST00000609091.1	584	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCTATGTACCCAAAGTT	NA	False	NA	NA	False	TATAAA	-18	NA	7786688	7786104	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_7786100_7786700
H1_mix_00087952	chr9	-	612	2	NNC	ENSG00000137038.8	novel	458	3	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTTCTTTGTCTTATCTG	10	True	NA	NA	False	AATAAA	-18	NA	7799766	7798343	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_7798638_7799448
H1_mix_00087953	chr9	-	9775	33	NIC	ENSG00000153707.19	novel	10389	46	NA	NA	-205	0	intron_retention	FALSE	canonical	3	17	junction_21	15.2055897924908	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGCCTTTGCTTTTGT	675	False	NA	-30	True	AATAAA	-18	NA	8857981	8314245	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_8317943_8319830_8319967_8331581_8331737_8338921_8339048_8340342_8340470_8341089_8341269_8341692_8341979_8375935_8376091_8376606_8376727_8389231_8389408_8404536_8404661_8436591_8436690_8449724_8449838_8460410_8460572_8465465_8465676_8470994_8471086_8484118_8484379_8485226_8485325_8485761_8486350_8492861_8492980_8497241_8497269_8499646_8499841_8500753_8501060_8504260_8504406_8507300_8507435_8517847_8518430_8521276_8521547_8524924_8525036_8528590_8528780_8633316_8633459_8636698_8636845_8733779_8733947_8857637
H1_mix_00087954	chr9	-	9751	32	NIC	ENSG00000153707.19	novel	10389	46	NA	NA	-205	0	intron_retention	FALSE	canonical	3	11	junction_18	14.943668070478	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGCCTTTGCTTTTGT	675	False	NA	-30	True	AATAAA	-18	NA	8857981	8314245	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_8317943_8319830_8319967_8331581_8331737_8338921_8339048_8340342_8340470_8341089_8341269_8341692_8341979_8375935_8376091_8376606_8376727_8389231_8389408_8404536_8404661_8436591_8436690_8449724_8449838_8460410_8460572_8465465_8465676_8470994_8471086_8484118_8484379_8485226_8485328_8485761_8486350_8492861_8492980_8499646_8499841_8500753_8501060_8504260_8504406_8507300_8507435_8517847_8518430_8521276_8521547_8524924_8525036_8528590_8528780_8633316_8633459_8636698_8636845_8733779_8733947_8857637
H1_mix_00087955	chr9	-	1205	4	FSM	ENSG00000153707.19	ENST00000471274.1	1205	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	5.09901951359278	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGGATTTGTCTGCTTAC	255	False	NA	NA	False	NA	NA	NA	8501059	8485762	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_8486350_8492861_8492980_8499646_8499841_8500753
H1_mix_00087957	chr9	-	9083	47	FSM	ENSG00000107186.17	ENST00000319217.12	7821	47	0	-1262	0	1261	multi-exon	FALSE	canonical	3	12	junction_20	31.9466118914378	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGTGGTACTTTGTTT	-7	True	NA	NA	False	AATAAA	-20	NA	13279692	13104444	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_13107112_13108935_13109060_13109951_13110065_13110635_13110741_13112023_13112147_13113010_13113055_13113930_13114022_13115247_13115335_13119501_13119650_13121738_13121933_13122086_13122171_13123152_13123299_13125215_13125391_13126515_13126591_13126679_13126773_13133823_13133905_13136091_13136183_13136711_13136804_13137956_13138154_13139986_13140150_13143465_13143565_13147547_13147659_13150510_13150689_13158017_13158111_13162690_13162796_13168365_13168565_13175751_13175876_13176135_13176418_13183417_13183586_13186269_13186387_13188783_13188994_13190113_13190300_13192130_13192296_13193166_13193314_13196120_13196231_13205035_13205108_13205915_13206100_13216773_13216863_13217179_13217295_13219558_13219769_13221371_13221501_13222232_13222447_13223570_13223711_13224373_13224584_13247634_13247802_13250299_13250373_13279399
H1_mix_00087961	chr9	-	813	1	FSM	ENSG00000273399.2	ENST00000608871.2	561	1	-203	-49	-203	49	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTCTGGGAATTAATTTC	NA	False	NA	NA	False	NA	NA	NA	14587529	14586716	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_14586700_14587500
H1_mix_00087964	chr9	-	812	3	NIC	ENSG00000164946.20	novel	1421	11	NA	NA	26943	-14	combination_of_known_splicesites	FALSE	canonical	1	15	junction_2	3.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAGTATTATAAAGTGTAA	NA	False	NA	36	True	AATAAA	-5	NA	14747218	14737165	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_14737596_14740148_14740235_14746922
H1_mix_00087965	chr9	-	699	2	FSM	ENSG00000164946.20	ENST00000485068.5	699	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGGGAAGAACCTGTTT	NA	False	NA	NA	False	NA	NA	NA	14784634	14775822	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_14776257_14784369
H1_mix_00087966	chr9	-	1986	1	FSM	ENSG00000214110.3	ENST00000397561.3	998	1	-381	-607	-381	607	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAACGTACATAAGAGTG	NA	False	NA	NA	False	AATAAA	-27	NA	14922715	14920729	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_14920700_14922700
H1_mix_00087967	chr9	-	3114	16	NIC	ENSG00000164985.15	novel	3342	16	NA	NA	0	-1485	combination_of_known_junctions	FALSE	canonical	3	403	junction_6	640.95479473118	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCTGAAGGATTCTACAC	171	False	NA	NA	False	NA	NA	NA	15510989	15465550	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_15465581_15466747_15466860_15468629_15468844_15468956_15469059_15469265_15469337_15469937_15471232_15472631_15472751_15474008_15474238_15478476_15478553_15479590_15479688_15486005_15486069_15486826_15486932_15489985_15490125_15506560_15506638_15510116_15510330_15510816
H1_mix_00087968	chr9	-	1265	10	NIC	ENSG00000164985.15	novel	1664	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	171	junction_1	718.723113292071	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTACATACTAAGGTCGGC	871	False	NA	NA	False	NA	NA	NA	15510289	15470989	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_15471177_15472631_15472751_15474008_15474238_15478476_15478553_15479590_15479688_15486005_15486069_15486826_15486932_15489985_15490125_15506560_15506638_15510116
H1_mix_00087969	chr9	-	4841	9	FSM	ENSG00000173068.18	ENST00000484726.5	4841	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	25.645418694184	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACATGGTCTTGTTTT	-22	True	NA	NA	False	AAAAAG	-2	NA	16870760	16418293	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_16419650_16421261_16421296_16429299_16430000_16435554_16437525_16552529_16552766_16582982_16583086_16727796_16727998_16738359_16738486_16870645
H1_mix_00087971	chr9	-	6387	18	NNC	ENSG00000147874.11	novel	6323	17	NA	NA	-37	29128	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	98.4203259171256	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTTAAAGAGTAGCATTTC	-17	True	NA	NA	False	NA	NA	NA	19102941	19024012	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_19024044_19053144_19056405_19057960_19059002_19060087_19060224_19063007_19063194_19063513_19063581_19070218_19070301_19076601_19076705_19078175_19078303_19080478_19080673_19082872_19083044_19086733_19086783_19087090_19087157_19089411_19089560_19093170_19093304_19094316_19094396_19096673_19096770_19102523
H1_mix_00087972	chr9	-	3756	13	FSM	ENSG00000147874.11	ENST00000380496.5	3756	13	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	68.7838805405905	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAGAAAAAAAAAAAA	9891	False	NA	NA	False	NA	NA	NA	19093213	19056617	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_19059002_19060087_19060224_19063007_19063194_19063513_19063581_19070218_19070301_19076601_19076705_19078175_19078303_19080478_19080673_19082872_19083044_19086733_19086783_19087090_19087157_19089411_19089560_19093170
H1_mix_00087973	chr9	-	997	2	FSM	ENSG00000147872.10	ENST00000475923.1	1000	2	0	3	0	-3	multi-exon	FALSE	canonical	3	329	junction_1	0	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGACTGCTCACTGCAG	14	False	NA	NA	False	NA	NA	NA	19127475	19125508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_19126449_19127418
H1_mix_00087974	chr9	-	3000	2	NNC	ENSG00000155886.12	novel	10990	11	NA	NA	278565	74302	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTCACACTCACTGGCC	4	True	NA	NA	False	AATAAA	-22	NA	19510429	19433149	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_19433175_19507454
H1_mix_00087975	chr9	-	2397	4	FSM	ENSG00000171889.6	ENST00000304425.4	2702	4	0	305	0	125	multi-exon	FALSE	canonical	2	4	junction_3	5.71547606649408	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTTGTCTAAGTAGG	13	True	NA	NA	False	NA	NA	NA	21559831	21454151	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_21455945_21476898_21477036_21477168_21477293_21559488
H1_mix_00087977	chr9	-	3983	7	FSM	ENSG00000107105.15	ENST00000397312.7	3983	7	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	34.5193182628703	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAGTGTGGTGAGTAGGT	-2	True	NA	-1	True	AATAAA	-17	NA	23826240	23690103	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_23692885_23693447_23693487_23701378_23701605_23704917_23705072_23731021_23731126_23762005_23762250_23825805
H1_mix_00087980	chr9	-	4817	10	FSM	ENSG00000147894.17	ENST00000488117.5	4808	10	0	-9	0	0	multi-exon	FALSE	canonical	3	132	junction_9	20.2539433746177	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTTTCAGTTGTTCATT	-25	True	NA	-3	True	AATAAA	-17	NA	27573448	27546545	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_27548423_27548556_27548667_27550649_27550708_27556560_27556797_27558490_27560300_27561584_27561650_27562380_27562477_27565530_27565591_27566676_27567165_27573430
H1_mix_00087981	chr9	-	249	1	FSM	ENSG00000260412.1	ENST00000566293.1	6881	1	6455	177	6455	-177	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCCTATTGTCTTGGTG	NA	False	NA	NA	False	NA	NA	NA	27938042	27937793	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_27937800_27938000
H1_mix_00087982	chr9	-	4197	7	NNC	ENSG00000174482.10	novel	3044	6	NA	NA	-543681	66	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	8.62972897733308	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCCAGAAGGTGGTACAC	3	True	NA	63	True	NA	NA	NA	29213967	27948011	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_27950707_28295207_28295367_28372835_28372869_28475939_28476026_28670199_28670281_28947817_28947915_29212921
H1_mix_00087983	chr9	-	407	1	FSM	ENSG00000232060.3	ENST00000419995.2	602	1	334	-139	334	139	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCCTGAATTTATCTGCC	NA	False	NA	NA	False	NA	NA	NA	30559147	30558740	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_30558700_30559100
H1_mix_00087986	chr9	-	4524	20	FSM	ENSG00000288684.1	ENST00000681750.1	4906	20	0	382	0	-329	multi-exon	TRUE	canonical	1	3	junction_18	39.8040908823393	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATGAGTTGGTTTTTTT	-2	True	NA	1	True	AATACA	-20	NA	32552568	32455704	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32457419_32459370_32459515_32466289_32466442_32467761_32467933_32472974_32473066_32476982_32477132_32480218_32480355_32481339_32481498_32485174_32485280_32487470_32487634_32487944_32488204_32488733_32488888_32489343_32489452_32491300_32491421_32492390_32492539_32493760_32493943_32500804_32500940_32550773_32550969_32551364_32551470_32552433
H1_mix_00087989	chr9	-	637	5	NNC	ENSG00000165264.11	novel	1361	4	NA	NA	0	23131	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1099.90874621488	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGTGTTCCAGCAGTGAT	-9	True	NA	NA	False	NA	NA	NA	32573159	32529869	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_32529909_32553763_32553945_32558909_32558955_32570959_32571053_32572880
H1_mix_00087990	chr9	-	2732	6	FSM	ENSG00000137074.20	ENST00000672244.1	2728	6	0	-4	0	4	multi-exon	FALSE	canonical	3	49	junction_2	140.242076425016	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAGAGTGAGACCCCATC	5	True	NA	NA	False	NA	NA	NA	33001602	32971445	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32973653_32974457_32974562_32985970_32986031_32987543_32987732_32989758_32989896_33001566
H1_mix_00087991	chr9	-	2199	6	FSM	ENSG00000137074.20	ENST00000673333.1	2178	6	0	-21	0	0	multi-exon	FALSE	canonical	0	0	junction_5	151.515807756155	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTTTTTGGGATAATAT	1368	False	NA	1	True	AATAAA	-24	NA	32988540	32972605	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082
H1_mix_00087992	chr9	-	1862	7	NIC	ENSG00000137074.20	novel	1814	8	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	163.590613694334	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTCAGTTGTTTTTT	9	True	NA	-9	True	AATAAA	-14	NA	33025108	32972615	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32989758_32989896_33024999
H1_mix_00087993	chr9	-	1891	8	NIC	ENSG00000137074.20	novel	1184	9	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	149.140257229665	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAAAAGTTGCGTAGAGC	2911	False	NA	-70	True	NA	NA	NA	33025156	32972676	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988082_32988125_32989758_32989896_33024999
H1_mix_00087995	chr9	-	1742	7	FSM	ENSG00000137074.20	ENST00000309615.8	1742	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_6	154.401802666506	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTCTGATGCATGGAAAGG	12	True	NA	42	True	NA	NA	NA	33001595	32972706	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32989758_32989896_33001515
H1_mix_00087996	chr9	-	1800	7	NIC	ENSG00000137074.20	novel	2023	8	NA	NA	193	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	169.591093188554	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCTCTCTTAAGTAGGTG	13	False	NA	-13	True	AATAAA	-16	NA	32989895	32972761	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_32973689_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082_32988125_32989758
H1_mix_00087998	chr9	-	1068	7	FSM	ENSG00000137074.20	ENST00000476858.6	1068	7	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_5	127.93542207779	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTCTATTATTGAGTGG	-34	True	NA	-11	True	ATTAAA	-21	NA	33001641	32973375	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32989758_32989896_33001566
H1_mix_00087999	chr9	-	1042	6	ISM	ENSG00000137074.20	ENST00000673211.1	1991	7	1819	759	-143	-1	3prime_fragment	FALSE	canonical	3	103	junction_5	112.466884014807	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTCTATTATTGAGTG	1639	False	NA	-12	True	ATTAAA	-20	NA	32988269	32973376	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988082
H1_mix_00088005	chr9	-	4456	29	NIC	ENSG00000137073.24	novel	4437	29	NA	NA	11	-3	combination_of_known_junctions	FALSE	canonical	3	18	junction_28	82.3643287659241	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCATGGTCTCTGTGTGGT	NA	False	NA	-10	True	AATAAA	-12	NA	34049377	33921695	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_33922600_33922686_33922879_33922965_33923034_33923185_33923294_33923378_33923479_33923794_33924001_33924205_33924285_33926616_33926665_33926988_33927081_33927796_33927993_33932561_33932629_33933489_33933647_33935838_33935879_33941648_33941863_33943419_33943590_33944364_33944640_33948373_33948588_33953284_33953475_33956078_33956147_33960825_33960879_33963725_33963792_33971650_33971755_33973182_33973238_33986759_33986838_33988972_33989127_33996222_33996334_33998786_33998865_34017049_34017190_34049148
H1_mix_00088006	chr9	-	4171	29	FSM	ENSG00000137073.24	ENST00000681980.1	4179	29	8	0	8	0	multi-exon	FALSE	canonical	1	3	junction_25	116.822056381245	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCTGAGAGCATGCATGG	256	False	NA	-22	True	NA	NA	NA	34048941	33921707	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_33922600_33922686_33922879_33922965_33923034_33923185_33923294_33923378_33923479_33923794_33924001_33924205_33924285_33926616_33926665_33926988_33927081_33927796_33927993_33932561_33932629_33933489_33933629_33935838_33935879_33941648_33941863_33943419_33943590_33944364_33944640_33948373_33948588_33953284_33953475_33956078_33956147_33960825_33960879_33963725_33963792_33971650_33971738_33973182_33973238_33986759_33986838_33988972_33989127_33998786_33998865_34011626_34011665_34017049_34017190_34048877
H1_mix_00088007	chr9	-	4286	30	FSM	ENSG00000137073.24	ENST00000682209.1	4286	30	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_28	94.6030193614077	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCTGAGAGCATGCATGG	-2	True	NA	-22	True	NA	NA	NA	34049199	33921707	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_33922600_33922686_33922879_33922965_33923034_33923185_33923294_33923378_33923479_33923794_33924001_33924205_33924285_33926616_33926665_33926988_33927081_33927796_33927993_33932561_33932629_33933489_33933629_33935838_33935879_33941648_33941863_33943419_33943590_33944364_33944640_33948373_33948588_33953284_33953475_33956078_33956147_33960825_33960879_33963725_33963792_33971650_33971755_33973182_33973238_33986759_33986838_33988972_33989127_33996222_33996334_33998786_33998865_34011626_34011665_34017049_34017190_34049148
H1_mix_00088012	chr9	-	316	1	FSM	ENSG00000238300.1	ENST00000458838.1	81	1	7	-242	7	242	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTGGTCTTGCCTGTTA	NA	False	NA	NA	False	NA	NA	NA	33934369	33934053	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_33934100_33934400
H1_mix_00088013	chr9	-	220	1	FSM	ENSG00000238886.1	ENST00000459386.1	82	1	19	-157	19	157	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCGAAAGTTTATCAGAAT	NA	False	NA	NA	False	NA	NA	NA	33952831	33952611	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_33952600_33952800
H1_mix_00088014	chr9	-	673	2	FSM	ENSG00000198876.13	ENST00000466402.1	673	2	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCGTAAGCCCCTACCTGA	NA	False	NA	NA	False	NA	NA	NA	34093779	34089411	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34089591_34093285
H1_mix_00088015	chr9	-	403	1	FSM	ENSG00000233668.1	ENST00000372214.3	645	1	346	-104	346	104	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAAATTCAACCAGGAACT	369	False	NA	NA	False	AGTAAA	-5	NA	34224282	34223879	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34223900_34224300
H1_mix_00088016	chr9	-	643	4	FSM	ENSG00000164972.14	ENST00000379124.5	648	4	0	5	0	-5	multi-exon	FALSE	canonical	1	2	junction_2	8.60232526704263	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAAGCCTGCCTCCTGTGT	41	False	NA	-3	True	AATAAA	-15	NA	34381531	34379023	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34379182_34379645_34379733_34380896_34381132_34381368
H1_mix_00088017	chr9	-	705	4	FSM	ENSG00000164970.15	ENST00000379078.1	770	4	0	65	0	-65	multi-exon	FALSE	canonical	3	23	junction_2	36.3348623531481	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTGCTATATTGTCAGA	6	True	NA	NA	False	NA	NA	NA	34458552	34402314	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34402468_34402704_34402808_34405864_34405965_34458203
H1_mix_00088019	chr9	-	401	2	FSM	ENSG00000137100.16	ENST00000481438.1	401	2	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCAACCTGCCTTTGTT	5750	False	NA	NA	False	NA	NA	NA	34614740	34613731	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34614102_34614709
H1_mix_00088021	chr9	-	1582	4	FSM	ENSG00000147955.18	ENST00000353468.4	1582	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	529.777521439162	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGTGTGTCTGAGCA	13	True	NA	-24	True	AATAAA	-20	NA	34637744	34634721	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34635859_34636996_34637090_34637266_34637421_34637546
H1_mix_00088023	chr9	-	2050	6	NIC	ENSG00000261215.1	novel	3264	5	NA	NA	1	-127	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	104.075741650012	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACAGTGGTTTGAGCAC	-2	True	NA	NA	False	NA	NA	NA	34666028	34662029	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_34662080_34662283_34662417_34663502_34665191_34665313_34665374_34665612_34665681_34665977
H1_mix_00088024	chr9	-	4609	16	FSM	ENSG00000165280.18	ENST00000679902.1	6033	16	0	1424	0	24	multi-exon	FALSE	canonical	2	1877	junction_2	331.345029974631	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGATGTCTCTTCGTTTAT	-12	True	NA	NA	False	NA	NA	NA	35072623	35055351	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35057531_35059063_35059220_35059492_35059802_35060312_35060526_35060800_35060924_35061014_35061180_35061576_35061690_35062002_35062139_35062216_35062351_35062977_35063081_35064153_35064286_35065250_35065382_35066674_35066818_35067890_35068064_35068250_35068363_35072336
H1_mix_00088026	chr9	-	3172	17	FSM	ENSG00000165280.18	ENST00000679862.1	3159	17	0	-13	0	0	multi-exon	FALSE	canonical	2	74	junction_2	779.082430551318	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTCTAAACCAAAAAATGAC	0	True	NA	-73	True	NA	NA	NA	35072611	35056620	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35057223_35057375_35057528_35059063_35059220_35059492_35059802_35060312_35060526_35060800_35060924_35061014_35061180_35061576_35061690_35062002_35062139_35062216_35062351_35062977_35063081_35064153_35064286_35065250_35065382_35066674_35066818_35067890_35068064_35068250_35068363_35072336
H1_mix_00088028	chr9	-	1339	11	NNC	ENSG00000165283.16	novel	1365	10	NA	NA	3	28483	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	583.903793445461	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGCCAGCCCAAGGAAACT	9196	False	NA	NA	False	AATAGA	-45	NA	35103192	35071292	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_35071323_35099894_35100173_35100597_35100727_35100931_35101012_35101134_35101280_35101425_35101561_35101709_35101812_35101903_35101963_35102094_35102195_35102685_35102824_35103049
H1_mix_00088029	chr9	-	1126	7	NIC	ENSG00000221829.10	novel	2556	14	NA	NA	93	0	combination_of_known_splicesites	FALSE	canonical	2	16	junction_1	105.351264296585	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCGTCTGCCTACTACATA	3285	False	NA	-21	True	AGTAAA	-13	NA	35076759	35073838	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_35074217_35074926_35075083_35075278_35075326_35075464_35075755_35075961_35076029_35076431_35076584_35076723
H1_mix_00088030	chr9	-	2240	14	NIC	ENSG00000221829.10	novel	2556	14	NA	NA	-82	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_10	103.845641024375	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCGTCTGCCTACTACATA	20	False	NA	-21	True	AGTAAA	-13	NA	35080024	35073838	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_35074217_35074370_35074495_35074926_35075083_35075278_35075326_35075464_35075755_35075961_35076029_35076431_35076584_35076723_35076871_35076970_35077102_35077263_35077400_35078604_35078737_35079150_35079242_35079440_35079536_35079730
H1_mix_00088033	chr9	-	2733	11	ISM	ENSG00000165282.14	ENST00000298004.9	2588	13	461	-116	461	116	3prime_fragment	FALSE	canonical	3	42	junction_5	28.8411164832432	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAACCTTTATGAAGTGG	7424	False	NA	70	True	NA	NA	NA	35095759	35088571	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_35089222_35089379_35089451_35090065_35090281_35090465_35090673_35091239_35091292_35092542_35092768_35093029_35093210_35093420_35093581_35093900_35094025_35094215_35094360_35095054
H1_mix_00088034	chr9	-	5452	5	FSM	ENSG00000165282.14	ENST00000465745.6	5447	5	0	-5	0	0	multi-exon	FALSE	canonical	2	3	junction_1	56.4773184561732	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCTGAGATGTGGGG	22	True	NA	-46	True	AATAAA	-16	NA	35096576	35088687	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35090285_35090465_35090673_35091239_35094360_35095054_35095567_35096560
H1_mix_00088036	chr9	-	3222	9	NIC	ENSG00000005238.20	novel	2566	10	NA	NA	-93	1	intron_retention	FALSE	canonical	3	35	junction_8	11.6806463862237	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTCTACTTTTGTTGTT	NA	False	NA	-8	True	AATAAA	-22	NA	35115955	35104119	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_35105375_35105681_35105858_35105940_35106010_35106251_35106411_35106537_35106644_35106832_35106892_35107380_35108350_35108593_35108738_35115670
H1_mix_00088037	chr9	-	434	2	Intergenic	novelGene_1546	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAACCCCCTTTGAGTGT	NA	False	NA	NA	False	NA	NA	NA	35156328	35151402	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_-_35151604_35156095
H1_mix_00088038	chr9	-	1370	7	NNC	ENSG00000137101.14	novel	1531	9	NA	NA	1337	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	9.88264472024906	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCACGTGTTAGTCTCATG	2528	False	NA	-27	True	TTTAAA	-4	NA	35617016	35609981	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_35610301_35610601_35610754_35611803_35611920_35612847_35612994_35615942_35616387_35616599_35616690_35616913
H1_mix_00088039	chr9	-	675	4	FSM	ENSG00000137101.14	ENST00000465754.6	675	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	1.24721912892465	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGAGTAAGGCTGTCCC	-2	True	NA	NA	False	NA	NA	NA	35646810	35616602	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35616690_35617175_35617248_35618013_35618122_35646402
H1_mix_00088040	chr9	-	250	1	FSM	ENSG00000277027.1	ENST00000363046.1	264	1	-1	15	-1	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTCAGCGCGGCTGTTT	-1	True	NA	NA	False	GGGGCT	-1	NA	35658018	35657768	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35657800_35658000
H1_mix_00088041	chr9	-	2862	8	FSM	ENSG00000137135.18	ENST00000475323.5	2862	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	97.9852133784293	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGGACTACTGTCTTTATT	6	True	NA	-2	True	NA	NA	NA	35665192	35658876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35659174_35660093_35662003_35662178_35662268_35663321_35663393_35664007_35664127_35664371_35664493_35664755_35664851_35665031
H1_mix_00088042	chr9	-	929	8	NIC	ENSG00000137135.18	novel	3678	9	NA	NA	8	-109	combination_of_known_junctions	FALSE	canonical	2	22	junction_3	77.4549243503759	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGTCACAGCCAAGAGTAC	19	True	NA	NA	False	NA	NA	NA	35665179	35661946	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_35662003_35662178_35662268_35662511_35662742_35663321_35663393_35664007_35664127_35664371_35664493_35664755_35664851_35665031
H1_mix_00088044	chr9	-	4803	7	FSM	ENSG00000198467.16	ENST00000471212.5	1363	7	-1213	-2227	-1057	-10	multi-exon	FALSE	canonical	3	238	junction_2	234.147211528702	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACTAGCCTCTCAAGGCC	-23	True	NA	-32	True	AATAAA	-7	NA	35691113	35682023	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35684316_35684487_35685140_35685268_35685340_35685433_35685552_35685646_35685781_35689145_35689272_35689703
H1_mix_00088045	chr9	-	699	2	FSM	ENSG00000198467.16	ENST00000486018.1	699	2	0	0	0	0	multi-exon	FALSE	canonical	3	876	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGCCCAGGCGGACAAGG	2	True	NA	NA	False	NA	NA	NA	35685543	35684750	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35685340_35685433
H1_mix_00088046	chr9	-	370	2	FSM	ENSG00000137076.21	ENST00000495712.1	370	2	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGAGGTGAGGCGATGT	3699	False	NA	NA	False	NA	NA	NA	35707967	35707355	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35707489_35707730
H1_mix_00088047	chr9	-	1913	13	FSM	ENSG00000070610.14	ENST00000467252.5	1913	13	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_12	47.630522426976	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCCAAACTATCTTTGAG	7831	False	NA	NA	False	NA	NA	NA	35742029	35737911	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35737940_35738036_35738153_35738231_35738375_35738525_35738633_35738751_35738904_35739001_35739110_35739314_35739420_35739627_35739801_35739997_35740124_35740208_35740363_35740525_35740629_35740824_35741065_35741671
H1_mix_00088049	chr9	-	745	1	FSM	ENSG00000213866.3	ENST00000444752.1	975	1	-80	310	-80	-310	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCAGGGTGCAGGAGAAC	57	False	NA	NA	False	NA	NA	NA	35972398	35971653	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35971700_35972400
H1_mix_00088050	chr9	-	5263	12	FSM	ENSG00000159921.20	ENST00000642385.2	5263	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	4.28720949910967	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTGTATTTTGTTTTG	-2	True	NA	0	True	AATAAA	-19	NA	36258448	36214440	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_36217601_36218182_36218300_36219837_36220021_36222776_36222999_36223372_36223503_36227247_36227459_36229020_36229109_36233919_36234133_36236831_36236985_36246030_36246483_36249191_36249398_36258320
H1_mix_00088051	chr9	-	4945	11	FSM	ENSG00000137075.18	ENST00000353739.8	4945	11	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_10	56.4885829172586	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGTTTCATGTCACTG	958	False	NA	-1	True	AATAAA	-25	NA	36400299	36336395	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_36339815_36342324_36342425_36344831_36344954_36351114_36351200_36352741_36352849_36353169_36353332_36356302_36356474_36357774_36357943_36369718_36369933_36375933_36376128_36400096
H1_mix_00088052	chr9	-	4991	12	FSM	ENSG00000137075.18	ENST00000377885.6	4985	12	2	-8	0	0	multi-exon	FALSE	canonical	1	3	junction_11	65.8524521528656	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGTTTCATGTCACTG	-6	True	NA	-1	True	AATAAA	-25	NA	36401196	36336395	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_36339815_36342324_36342425_36344831_36344954_36351114_36351200_36352741_36352849_36353169_36353332_36356302_36356474_36357774_36357943_36369718_36369933_36375933_36376128_36390466_36390617_36401097
H1_mix_00088054	chr9	-	735	3	NNC	ENSG00000175768.13	novel	706	2	NA	NA	0	32478	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2236.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGAGACGACAAAAAAAGAAA	-5	True	NA	NA	False	NA	NA	NA	37592596	37550167	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_37550198_37588412_37588933_37592411
H1_mix_00088057	chr9	-	1168	3	FSM	ENSG00000122696.14	ENST00000242275.7	1171	3	0	3	0	-3	multi-exon	FALSE	canonical	3	13	junction_1	7.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCAGTTTGGCCTCTTT	-13	True	NA	-23	True	AATAGA	-12	NA	37904127	37887606	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_37888593_37899828_37899951_37904067
H1_mix_00088058	chr9	-	758	5	ISM	ENSG00000180071.20	ENST00000399703.6	3971	16	277	38925	277	-9120	5prime_fragment	FALSE	canonical	3	11	junction_1	1.29903810567666	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTGATTTGAGAAGGTAT	2197	False	NA	NA	False	NA	NA	NA	38620319	38610288	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_38610411_38611214_38611322_38615593_38615768_38615929_38616045_38620079
H1_mix_00088059	chr9	-	7633	24	NIC	ENSG00000106714.18	novel	13150	24	NA	NA	29	2572	combination_of_known_junctions	TRUE	canonical	2	11	junction_4	10.8525083560506	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGATGGCTTTTTTCTTT	24	False	NA	NA	False	AATAAA	-22	NA	39288138	39070194	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_39074012_39078384_39078457_39078689_39078921_39085735_39085824_39086715_39086850_39088422_39088648_39099910_39100151_39102496_39102716_39103743_39103915_39109159_39109288_39118102_39118260_39132931_39133133_39140518_39140639_39144239_39144347_39149805_39149978_39165932_39166077_39171368_39171631_39175948_39176093_39177317_39177503_39178156_39178361_39193127_39193276_39238992_39239187_39266895_39267007_39287979
H1_mix_00088062	chr9	-	1780	1	FSM	ENSG00000243695.1	ENST00000425044.1	720	1	-41	-1019	-41	1019	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGGGTTTTTCTCTGGA	NA	False	NA	NA	False	AATAAA	-30	NA	39174554	39172774	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_39172800_39174600
H1_mix_00088063	chr9	-	2599	2	FSM	ENSG00000278175.5	ENST00000618092.3	2612	2	31	-18	0	-2	multi-exon	FALSE	canonical	1	2	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATCGGGCCAGGCA	4	True	NA	NA	False	NA	NA	NA	39810058	39807362	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_39809634_39809730
H1_mix_00088064	chr9	-	772	4	FSM	ENSG00000215126.11	ENST00000622791.4	720	4	-52	0	-52	0	multi-exon	FALSE	canonical	3	181	junction_3	25.7293606605372	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTCAAGCATTTATTT	NA	False	NA	NA	False	AATAAA	-18	NA	41134086	41131677	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_41131841_41132227_41132358_41133504_41133571_41133673
H1_mix_00088065	chr9	-	1462	16	NIC	ENSG00000215126.11	novel	2433	17	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_9	367.093024843688	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTCAAGCATTTATTT	40	False	NA	NA	False	AATAAA	-18	NA	41189303	41131677	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_41131841_41132227_41132358_41133504_41133571_41133673_41133743_41145280_41145333_41156382_41156440_41162332_41162378_41165000_41165088_41166783_41166831_41170278_41170424_41171846_41171935_41172711_41172750_41182374_41182467_41183563_41183661_41185992_41186080_41189104
H1_mix_00088069	chr9	-	495	1	FSM	ENSG00000232815.1	ENST00000455245.1	715	1	233	-13	233	13	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGGGCAGGGTGGGGGC	NA	False	NA	NA	False	NA	NA	NA	63818229	63817734	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_63817700_63818200
H1_mix_00088070	chr9	-	344	2	Intergenic	novelGene_1556	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAGAATGAAGAGCCAG	NA	False	NA	NA	False	NA	NA	NA	65287806	65285690	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_-_65285713_65287484
H1_mix_00088071	chr9	-	339	1	FSM	ENSG00000278763.1	ENST00000610601.1	213	1	-90	-36	-90	36	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTCTGTGGCGGTGGCA	714	False	NA	NA	False	NA	NA	NA	67725992	67725653	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_67725700_67726000
H1_mix_00088072	chr9	-	10127	7	NIC	ENSG00000188647.13	novel	10099	8	NA	NA	0	0	intron_retention	TRUE	canonical	3	68	junction_1	8.13770374382247	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTAAGTGTGATTTTGTT	0	True	NA	-1	True	AGTAAA	-21	NA	69759955	69709521	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_69718685_69723325_69723631_69732138_69732353_69734149_69734255_69741791_69741859_69750780_69750951_69759852
H1_mix_00088073	chr9	-	10043	8	NIC	ENSG00000188647.13	novel	10099	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	21.7584138077336	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTAAGTGTGATTTTGTT	0	True	NA	-1	True	AGTAAA	-21	NA	69759955	69709521	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_69718566_69718649_69718685_69723325_69723631_69732138_69732353_69734149_69734255_69741791_69741859_69750780_69750951_69759852
H1_mix_00088078	chr9	-	3416	5	NNC	ENSG00000107362.14	novel	3065	4	NA	NA	-63	21	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_4	122.237473795886	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGCTCCCCACCCCCACA	NA	False	NA	15	True	AGTAAA	-41	NA	71911256	71865130	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_71867007_71870082_71870263_71874613_71875084_71906383_71906651_71910633
H1_mix_00088079	chr9	-	2330	3	NIC	ENSG00000107362.14	novel	3065	4	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	129.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCTTATTTGCCTTTT	304	False	NA	-6	True	AGTAAA	-20	NA	71910928	71865151	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_71867007_71870082_71870263_71910633
H1_mix_00088082	chr9	-	6785	3	Intergenic	novelGene_1561	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	9	junction_1	8	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTTTTCTTGATGTTT	NA	False	NA	NA	False	AATAAA	-21	NA	74092808	74002771	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_-_74003121_74004560_74006235_74088046
H1_mix_00088083	chr9	-	4344	9	NNC	ENSG00000156017.13	novel	4259	8	NA	NA	-10	-230	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	112.522706041936	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATAGTTGCTTGGTTTTCA	-13	True	NA	-5	True	ATTAAA	-21	NA	75028433	74981019	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_74983869_74984906_74985011_74996446_74996561_74998597_74998777_74999729_74999871_75016267_75016432_75017252_75017449_75027052_75027228_75028011
H1_mix_00088085	chr9	-	1765	10	NNC	ENSG00000106733.21	novel	2050	10	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	35.1297418924776	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCTCAATCTTTTTTTTA	-22	True	NA	NA	False	AATAAA	-15	NA	75088190	75060576	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_75060861_75060884_75061568_75066756_75066841_75068995_75069103_75069741_75069814_75069894_75070043_75077158_75077208_75077489_75077581_75083086_75083151_75088007
H1_mix_00088086	chr9	-	2046	10	FSM	ENSG00000106733.21	ENST00000376811.5	2050	10	0	4	0	0	multi-exon	FALSE	canonical	2	4	junction_8	35.973584272798	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCTCAATCTTTTTTTTA	-22	True	NA	NA	False	AATAAA	-15	NA	75088190	75060576	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_75061568_75066756_75066841_75068995_75069103_75069741_75069814_75069894_75070043_75077158_75077208_75077489_75077581_75078325_75078583_75083086_75083151_75088007
H1_mix_00088087	chr9	-	1905	7	FSM	ENSG00000106733.21	ENST00000494066.1	1903	7	0	-2	0	0	multi-exon	FALSE	canonical	3	52	junction_5	20.6128331116537	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTGGAATTCATTGTG	12	True	NA	-1	True	AATAAA	-19	NA	75088209	75061199	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_75061568_75066756_75066841_75068995_75070043_75077158_75077208_75077489_75077581_75083086_75083151_75088007
H1_mix_00088089	chr9	-	1392	10	NIC	ENSG00000106733.21	novel	2050	10	NA	NA	0	-9	combination_of_known_junctions	FALSE	canonical	2	8	junction_8	40.2734480431456	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAATCCAATATCTGTGG	12	True	NA	-12	True	AATAAA	-8	NA	75088209	75061210	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_75061568_75066756_75066841_75068995_75069103_75069741_75069814_75069894_75070043_75077158_75077208_75077489_75077581_75083086_75083151_75087650_75087869_75088007
H1_mix_00088090	chr9	-	7434	11	FSM	ENSG00000106772.19	ENST00000426088.5	7434	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	8.64002314811714	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACTTTGTCCCTTAGACT	NA	False	NA	NA	False	AAGAAA	-42	NA	76710237	76614288	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_76614601_76629191_76629291_76636470_76636558_76637417_76637550_76638185_76638289_76641971_76641981_76644738_76644910_76652482_76652684_76655422_76655503_76703336_76704100_76704760
H1_mix_00088092	chr9	-	2439	16	NIC	ENSG00000196781.16	novel	4135	20	NA	NA	42	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_12	155.672076993774	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTTCCTTTTCTTTCT	3767	False	NA	79	True	AGTAAA	-18	NA	81685854	81583682	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_81584306_81584447_81584525_81585504_81585656_81587680_81587829_81590804_81591053_81593024_81593275_81610219_81610297_81611768_81611960_81613376_81613522_81615981_81616135_81616645_81616700_81620440_81620558_81652213_81652289_81653973_81654037_81685675_81685721_81685832
H1_mix_00088097	chr9	-	4264	20	NIC	ENSG00000196781.16	novel	4135	20	NA	NA	-99	0	combination_of_known_junctions	FALSE	canonical	3	131	junction_14	130.738473589278	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTTCCTTTTCTTTCT	NA	False	NA	79	True	AGTAAA	-18	NA	81689646	81583682	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_81584306_81584447_81584525_81585504_81585656_81587680_81587829_81590804_81591053_81593024_81593275_81610219_81610297_81611768_81611960_81613376_81613522_81615981_81616135_81616645_81616700_81620440_81620558_81633347_81633365_81634096_81634302_81652183_81652289_81653973_81654037_81685675_81685721_81685832_81685897_81687333_81687435_81688216
H1_mix_00088100	chr9	-	6063	9	FSM	ENSG00000135018.14	ENST00000533705.5	6055	9	0	-8	0	5	multi-exon	FALSE	canonical	3	294	junction_3	268.111800374396	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTTGCCTCTTTTGTA	NA	False	NA	-1	True	AATAAA	-21	NA	83686053	83659962	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_83661940_83663874_83664044_83665029_83665146_83666349_83669328_83677726_83677962_83678440_83678600_83679774_83680038_83682950_83683067_83686003
H1_mix_00088101	chr9	-	2299	10	FSM	ENSG00000135018.14	ENST00000257468.11	2299	10	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	304.866455280924	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATCATTTGCACTCTAT	19	True	NA	-20	True	AATAAA	-15	NA	83707934	83661428	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_83661940_83663874_83664044_83665029_83665146_83669184_83669328_83677726_83677962_83678440_83678600_83679774_83680038_83682950_83683067_83686003_83686156_83707499
H1_mix_00088102	chr9	-	2766	17	NIC	ENSG00000165119.21	novel	2652	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	5714	junction_1	1162.56171207166	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACACCCATGATGCTAG	-5	True	NA	-25	True	AATAAA	-1	NA	83980616	83968196	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_83969381_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83973901_83973974_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372_83978453_83980502
H1_mix_00088104	chr9	-	4495	27	NNC	ENSG00000135049.16	novel	4464	26	NA	NA	0	76295	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	52.7248074955593	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGGAGGCAAATTGTC	-23	True	NA	NA	False	AAAAAG	-5	NA	85741954	85470243	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_85470280_85546543_85547287_85575314_85575476_85578919_85579097_85585462_85585595_85586830_85586961_85588297_85588479_85589527_85589682_85592559_85592705_85596361_85596450_85618982_85619132_85619214_85619302_85621201_85621286_85632661_85633375_85642826_85642944_85646320_85646419_85655142_85655321_85657434_85657644_85660935_85660974_85669484_85669579_85672549_85672682_85677435_85677583_85678334_85678399_85681267_85681336_85692688_85692814_85712501_85712567_85741774
H1_mix_00088106	chr9	-	4330	26	FSM	ENSG00000135049.16	ENST00000376083.7	4208	26	0	-122	0	122	multi-exon	FALSE	canonical	3	48	junction_16	43.9426171273401	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGCTCATGCCTGTA	113	False	NA	NA	False	GATAAA	-28	NA	85741818	85546416	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_85547287_85575314_85575476_85578919_85579097_85585462_85585595_85586830_85586961_85588297_85588479_85589527_85589682_85592559_85592705_85596361_85596450_85618982_85619132_85619214_85619302_85621201_85621286_85632661_85633375_85642826_85642944_85646320_85646419_85655142_85655201_85657434_85657644_85660935_85660974_85669484_85669579_85672549_85672682_85677435_85677583_85678334_85678399_85681267_85681336_85692688_85692814_85712501_85712567_85741774
H1_mix_00088110	chr9	-	1946	4	FSM	ENSG00000135070.15	ENST00000311534.6	813	4	0	-1133	0	0	multi-exon	FALSE	canonical	3	33	junction_3	175.307349151901	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTTTTATTATTGAGGG	438	False	NA	NA	False	ATTAAA	-30	NA	86282108	86264545	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_86266192_86272006_86272113_86274188_86274243_86281968
H1_mix_00088112	chr9	-	251	1	FSM	ENSG00000238110.1	ENST00000427728.1	748	1	265	232	265	-232	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTGTCTGCACACACGGA	NA	False	NA	NA	False	NA	NA	NA	87944758	87944507	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_87944500_87944800
H1_mix_00088113	chr9	-	1916	6	FSM	ENSG00000156345.18	ENST00000375871.8	1907	6	0	-9	0	0	multi-exon	FALSE	canonical	3	12	junction_2	18.9799894625893	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGACTAGAGAAACTTATTC	205	False	NA	NA	False	AATAAA	-29	NA	87974487	87966440	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_87967660_87969193_87969350_87970775_87970898_87971146_87971336_87973921_87974036_87974371
H1_mix_00088121	chr9	-	3401	5	NNC	ENSG00000224945.1	novel	585	3	NA	NA	-68884	-6	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_3	10.4731800328267	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGACCCATTATGTCCAT	1	True	NA	-8	True	ATTAAA	-16	NA	89178818	89088609	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_89088936_89109047_89109129_89109479_89111571_89112555_89112627_89177986
H1_mix_00088122	chr9	-	2958	3	FSM	ENSG00000224945.1	ENST00000429700.1	585	3	-2092	-281	-2092	-2	multi-exon	FALSE	canonical	3	21	junction_2	6	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCATTATGTCCATGGAG	NA	False	NA	-4	True	ATTAAA	-20	NA	89112026	89088605	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_89088936_89109047_89109129_89109479
H1_mix_00088123	chr9	-	3497	17	NIC	ENSG00000187764.12	novel	3594	20	NA	NA	5	353	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	81.0898180646004	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCACAACAGGTGTCCTGA	-13	True	NA	NA	False	NA	NA	NA	89498108	89361247	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_89362429_89363429_89363528_89363740_89363951_89386366_89386483_89387385_89387609_89388635_89388793_89388871_89389048_89391263_89391416_89392422_89392537_89393561_89393656_89396736_89396836_89399275_89399339_89402870_89403017_89405350_89405700_89418055_89418119_89455887_89455954_89497918
H1_mix_00088124	chr9	-	6100	19	NIC	ENSG00000187764.12	novel	3594	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_3	72.4953170049923	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTCTCATGAGTGTTT	-18	True	NA	-1	True	ATTAAA	-15	NA	89498113	89361600	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_89362429_89363429_89363528_89363740_89363951_89376832_89379630_89381054_89381099_89381173_89381347_89386366_89386483_89387385_89387609_89388635_89388793_89388871_89389048_89391263_89391416_89392422_89392537_89393561_89393656_89396736_89396836_89399275_89399339_89402870_89403017_89405350_89405700_89455887_89455954_89497918
H1_mix_00088128	chr9	-	1086	3	FSM	ENSG00000231107.2	ENST00000425666.2	1096	3	0	10	0	-10	multi-exon	FALSE	canonical	1	1	junction_2	0.5	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACATTAACTGTCACATT	NA	False	NA	-27	True	AATAAA	-16	NA	90433566	90300905	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_90301654_90383519_90383722_90433430
H1_mix_00088129	chr9	-	997	3	FSM	ENSG00000230537.2	ENST00000423380.2	1479	3	468	14	379	-14	multi-exon	FALSE	canonical	1	1	junction_2	1	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTTCCATTTATCTTTG	NA	False	NA	NA	False	ATTAAA	-8	NA	91107500	91104970	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_91105383_91106464_91106672_91107122
H1_mix_00088130	chr9	-	1483	9	FSM	ENSG00000148090.12	ENST00000303617.5	1490	9	0	7	0	1	multi-exon	FALSE	canonical	1	2	junction_6	72.0059676346343	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGAATTTTTCTCTTACC	-3	True	NA	-22	True	AATAAA	-18	NA	91361913	91213821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_91214426_91216058_91216107_91217276_91217328_91220804_91220993_91296020_91296078_91297983_91298077_91355882_91355971_91356087_91356156_91361627
H1_mix_00088131	chr9	-	3864	9	NNC	ENSG00000169071.15	novel	4158	9	NA	NA	-2257	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	58.772867889869	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCATGTGATTGGCTCTC	8	False	NA	-16	True	AATAAA	-8	NA	91952485	91722606	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_91725108_91726540_91726744_91730943_91731156_91733121_91733437_91737390_91737519_91756070_91756102_91757271_91757560_91775740_91775819_91952377
H1_mix_00088136	chr9	-	5835	34	FSM	ENSG00000196305.19	ENST00000682156.1	5830	34	0	-5	0	0	multi-exon	FALSE	canonical	3	15	junction_14	515.544871212236	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTAGACATCTAATAAAACT	-9	True	NA	-34	True	CATAAA	-33	NA	92293668	92210237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92255534_92255605_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92287911_92288125_92288283_92289300_92289427_92293440
H1_mix_00088137	chr9	-	6488	32	FSM	ENSG00000196305.19	ENST00000684726.1	6488	32	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_31	365.937741701029	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTAGACATCTAATAAAACT	3	True	NA	-34	True	CATAAA	-33	NA	92293695	92210237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92287911_92288125_92288283_92289300_92289427_92293440
H1_mix_00088139	chr9	-	4484	34	FSM	ENSG00000196305.19	ENST00000683817.1	4597	34	118	-5	-2	0	multi-exon	FALSE	canonical	1	17	junction_14	409.955922735431	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTAGACATCTAATAAAACT	-3	True	NA	-34	True	CATAAA	-33	NA	92293736	92210237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253447_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293610
H1_mix_00088142	chr9	-	4456	33	FSM	ENSG00000196305.19	ENST00000683119.1	4452	33	0	-4	0	0	multi-exon	FALSE	canonical	3	22	junction_10	518.226866305615	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATGTGTTGAAAGTAAT	18	True	NA	-17	True	AATAAA	-12	NA	92293680	92210344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249992_92250186_92250290_92250712_92250835_92251807_92251886_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293440
H1_mix_00088145	chr9	-	4217	33	FSM	ENSG00000196305.19	ENST00000682578.1	4213	33	0	-4	0	0	multi-exon	FALSE	canonical	2	8	junction_3	398.616102127097	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATGTGTTGAAAGTAAT	3	True	NA	-17	True	AATAAA	-12	NA	92293695	92210344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293610
H1_mix_00088146	chr9	-	4186	33	FSM	ENSG00000196305.19	ENST00000627121.3	4186	33	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_31	418.702197598051	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATGTGTTGAAAGTAAT	3	True	NA	-17	True	AATAAA	-12	NA	92293695	92210344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92289300_92289427_92293610
H1_mix_00088150	chr9	-	2833	10	ISM	ENSG00000198000.12	ENST00000360868.7	4341	17	12188	-252	-1647	-3	3prime_fragment	FALSE	canonical	3	146	junction_9	16.8588914885357	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATACTTGTGTTTTGGTG	NA	False	NA	-5	True	GATAAA	-20	NA	92312472	92297361	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_92297887_92298256_92298337_92298883_92298955_92299889_92300017_92301550_92301823_92305752_92305831_92306885_92307025_92310170_92310262_92310552_92310676_92311145
H1_mix_00088151	chr9	-	4416	18	FSM	ENSG00000198000.12	ENST00000358855.8	4422	18	3	3	-1	-3	multi-exon	FALSE	canonical	0	0	junction_11	63.1284733876017	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATACTTGTGTTTTGGTG	3	True	NA	-5	True	GATAAA	-20	NA	92325591	92297361	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92297887_92298256_92298337_92298883_92298955_92299889_92300017_92301550_92301823_92305752_92305831_92306885_92307025_92310170_92310262_92310552_92310676_92311145_92311260_92314266_92316139_92318617_92318687_92319220_92319357_92321667_92321747_92323235_92323352_92323440_92323504_92324022_92324210_92325317
H1_mix_00088152	chr9	-	4341	17	FSM	ENSG00000198000.12	ENST00000360868.7	4341	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	60.7805671555473	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAAGATAGTCCTTGAAA	934	False	NA	NA	False	ATTAAA	-21	NA	92324660	92297613	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92297887_92298256_92298337_92298883_92298955_92299889_92300017_92301550_92301823_92305752_92305831_92306885_92307025_92310170_92310262_92310552_92310676_92311145_92311260_92314266_92316139_92318617_92318687_92319220_92319357_92321667_92321747_92323235_92323352_92323440_92323504_92324022
H1_mix_00088161	chr9	-	4680	5	NNC	ENSG00000188938.17	novel	1280	4	NA	NA	0	49	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	118.934856118801	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTCCTAAAAAAACCATCAA	2365	False	NA	24	True	ATTAAA	-12	NA	93451208	93443282	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_93445281_93445521_93447698_93448368_93448490_93450478_93450600_93450944
H1_mix_00088162	chr9	-	5246	3	FSM	ENSG00000188938.17	ENST00000479094.5	1905	3	-130	-3211	-66	49	multi-exon	FALSE	canonical	0	0	junction_1	20.5	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTCCTAAAAAAACCATCAA	1919	False	NA	24	True	ATTAAA	-12	NA	93451654	93443282	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_93447698_93450478_93450600_93450944
H1_mix_00088163	chr9	-	5507	4	FSM	ENSG00000188938.17	ENST00000520470.5	1553	4	-332	-3622	-8	49	multi-exon	FALSE	canonical	0	0	junction_2	129.740767173108	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTCCTAAAAAAACCATCAA	-16	True	NA	24	True	ATTAAA	-12	NA	93453589	93443282	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_93447698_93448368_93448490_93450478_93450600_93452739
H1_mix_00088164	chr9	-	1510	4	FSM	ENSG00000188938.17	ENST00000476484.5	1491	4	0	-19	0	0	multi-exon	FALSE	canonical	0	0	junction_2	136.992294998255	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGAGTTTTTATCTTTTA	20	True	NA	NA	False	NA	NA	NA	93451562	93446904	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_93447698_93448368_93448490_93450478_93450600_93451087
H1_mix_00088166	chr9	-	320	1	FSM	ENSG00000288023.1	ENST00000662818.1	705	1	22	363	22	-363	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTTACTGAAATACAGAT	547	False	NA	NA	False	AATAAA	-9	NA	94726553	94726233	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_94726200_94726600
H1_mix_00088167	chr9	-	4495	15	NIC	ENSG00000158169.13	novel	4533	15	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_14	15.2355652661656	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTGTATCCATTAAATAT	785	False	NA	-1	True	AATAAA	-18	NA	95316919	95099054	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_95101851_95107065_95107270_95111462_95111638_95114628_95114711_95117314_95117391_95125085_95125186_95126528_95126582_95135345_95135503_95149922_95150088_95171078_95171144_95172036_95172148_95240648_95240744_95247431_95247517_95249126_95249370_95316831
H1_mix_00088170	chr9	-	846	1	FSM	ENSG00000271384.1	ENST00000603533.1	673	1	-191	18	-191	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTGCCCAGGTATCAGC	NA	False	NA	NA	False	AATAAA	-12	NA	95407853	95407007	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_95407000_95407900
H1_mix_00088172	chr9	-	259	2	FSM	ENSG00000185920.18	ENST00000488809.2	301	2	0	42	0	-42	multi-exon	FALSE	canonical	3	15	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCGGCAAGTGTATTTGT	2952	False	NA	NA	False	NA	NA	NA	95480455	95479897	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_95480091_95480389
H1_mix_00088173	chr9	-	539	4	FSM	ENSG00000185920.18	ENST00000551630.1	539	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	2.35702260395516	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGACAGCATACCTCCTGTA	7	True	NA	NA	False	NA	NA	NA	95506610	95481965	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_95482041_95482133_95482204_95485684_95485875_95506406
H1_mix_00088174	chr9	-	1626	13	NNC	ENSG00000130958.13	novel	1623	12	NA	NA	0	30455	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	46.2123720807895	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACCTGTTGTGCTTTTAT	24	True	NA	NA	False	AAAAAG	-4	NA	96383678	96282988	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_96283021_96320705_96321342_96321997_96322081_96324090_96324170_96336716_96336785_96343903_96343997_96345298_96345402_96351102_96351172_96352037_96352110_96360153_96360222_96364463_96364551_96368271_96368306_96383476
H1_mix_00088175	chr9	-	867	8	FSM	ENSG00000130958.13	ENST00000490599.2	867	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	34.1078720939244	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTGGAGCCCCAGCTGC	NA	False	NA	NA	False	NA	NA	NA	96360192	96320997	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_96321342_96324090_96324170_96336716_96336785_96343903_96343997_96345298_96345402_96351102_96351172_96352037_96352110_96360153
H1_mix_00088181	chr9	-	1093	5	NIC	ENSG00000158122.12	novel	2899	6	NA	NA	-2	-1662	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	18.7882942280559	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTAGTGTTATTATTTTCT	-2	True	NA	2	True	AATAAA	-36	NA	96655305	96641238	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_96641887_96651389_96651496_96651658_96651713_96654704_96654774_96655089
H1_mix_00088182	chr9	-	932	5	FSM	ENSG00000196597.13	ENST00000478850.5	932	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	10.1242283656583	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACAATTCAGACTCTGGG	151	False	NA	NA	False	AGTAAA	-43	NA	96854360	96819407	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_96819779_96827079_96827182_96844889_96845017_96851946_96852006_96854087
H1_mix_00088183	chr9	-	9708	7	FSM	ENSG00000196312.15	ENST00000647176.1	9746	7	0	38	0	-38	multi-exon	FALSE	canonical	2	2	junction_1	199.802124335276	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATATATGAGGGCTGAAGT	NA	False	NA	NA	False	NA	NA	NA	97013675	96887410	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_96896038_96897934_96898128_96918642_96918827_96949554_96949683_96958834_96958898_96972852_96972949_97013258
H1_mix_00088184	chr9	-	1246	8	FSM	ENSG00000196312.15	ENST00000645073.1	1246	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	193.307094161237	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAGAAAAATTAGCC	NA	False	NA	NA	False	NA	NA	NA	97013637	96902983	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_96903109_96918642_96918827_96933794_96933916_96942602_96942753_96949554_96949683_96958834_96958898_96972852_96972949_97013258
H1_mix_00088188	chr9	-	800	5	NNC	ENSG00000196312.15	novel	1802	5	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	179.712965586793	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGTCTATTCTAATGA	6	True	NA	-1	True	AATAAA	-16	NA	97013593	96942912	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_96943091_96949554_96949683_96958834_96958898_96972852_96972949_97013258
H1_mix_00088190	chr9	-	2478	6	FSM	ENSG00000136943.12	ENST00000680435.1	2478	6	0	0	0	0	multi-exon	FALSE	canonical	3	1952	junction_2	185.675415712474	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTTGAAATAAATTTTAAT	2	True	NA	29	True	AAAAAG	-12	NA	97039139	97032685	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_97033049_97034725_97034844_97035527_97036748_97037251_97037399_97037492_97038054_97039070
H1_mix_00088192	chr9	-	1356	1	FSM	ENSG00000228376.3	ENST00000436355.2	1356	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAGACCCACAGAGTTGG	NA	False	NA	NA	False	NA	NA	NA	97077601	97076245	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_97076200_97077600
H1_mix_00088193	chr9	-	2262	2	Genic_Genomic	ENSG00000228038.1	novel	945	1	NA	NA	-680	989	multi-exon	FALSE	canonical	3	16	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATTTGAGGAAACAAAAAT	NA	False	NA	NA	False	ATTAAA	-42	NA	97095318	97092704	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_-_97094770_97095121
H1_mix_00088195	chr9	-	809	1	FSM	ENSG00000277103.1	ENST00000618889.1	801	1	-31	23	-31	-23	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAAAAAGTCACCCGGGAA	NA	False	NA	NA	False	NA	NA	NA	97152725	97151916	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_97151900_97152700
H1_mix_00088196	chr9	-	2023	3	NNC	ENSG00000159712.10	novel	2980	16	NA	NA	30647	-22648	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	19.5	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAGTTGGTATAACTTT	NA	False	NA	NA	False	NA	NA	NA	97190588	97179217	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_97180917_97185441_97185513_97190335
H1_mix_00088197	chr9	-	4689	1	FSM	ENSG00000188801.9	ENST00000568013.1	1209	1	-541	-2939	-541	2939	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTGTTCTGAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-4	NA	97200052	97195363	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_97195400_97200100
H1_mix_00088199	chr9	-	983	2	FSM	ENSG00000106785.15	ENST00000478530.1	982	2	0	-1	0	1	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGAAAGAGCTTCTGATA	4561	False	NA	NA	False	NA	NA	NA	98088001	98080838	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_98081262_98087441
H1_mix_00088202	chr9	-	3192	13	FSM	ENSG00000095383.20	ENST00000375064.5	3174	13	0	-18	0	0	multi-exon	FALSE	canonical	2	2	junction_1	9.80185640013609	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTCTCAGTTACCAGTTG	9843	False	NA	3	True	TATAAA	-45	NA	98255580	98199010	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_98199585_98200252_98200375_98201478_98201665_98203287_98203409_98208667_98209145_98210655_98210844_98213107_98213219_98220832_98221229_98228951_98229149_98233415_98233550_98243993_98244130_98251784_98251927_98255172
H1_mix_00088203	chr9	-	3064	12	FSM	ENSG00000095383.20	ENST00000342112.9	3046	12	0	-18	0	0	multi-exon	FALSE	canonical	2	3	junction_11	9.33225101949734	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTCTCAGTTACCAGTTG	12	True	NA	3	True	TATAAA	-45	NA	98255590	98199010	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_98199589_98200252_98200375_98201478_98201665_98203287_98203409_98208667_98209145_98210655_98210844_98213107_98213219_98220832_98221229_98228951_98229149_98233415_98233550_98243993_98244130_98255172
H1_mix_00088204	chr9	-	5575	19	FSM	ENSG00000136928.7	ENST00000259455.4	5499	19	-63	-13	-63	13	multi-exon	FALSE	canonical	0	0	junction_15	2.88300683229536	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCGTCTTTAATGCCTA	3	True	NA	-23	True	AATAAA	-38	NA	98708998	98288095	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_98290750_98293784_98293903_98299223_98299354_98303240_98303424_98306120_98306346_98311094_98311206_98362714_98362838_98371463_98371572_98385639_98385773_98388853_98389005_98394174_98394256_98406080_98406142_98453980_98454218_98473145_98473347_98480931_98480998_98496412_98496515_98541872_98542044_98577934_98578073_98708416
H1_mix_00088205	chr9	-	4130	16	NNC	ENSG00000165138.18	novel	7190	15	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	141.894170266278	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCCCACTTTGACTACAT	-11	True	NA	-7	True	ATTAAA	-14	NA	98796539	98731327	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_98732554_98736281_98736624_98745558_98745676_98751028_98751097_98756419_98756607_98768080_98768251_98770895_98771047_98773876_98774081_98777404_98777455_98778225_98778425_98780188_98780338_98782466_98782574_98783952_98784158_98784831_98784877_98790103_98790607_98796132
H1_mix_00088207	chr9	-	1469	6	NNC	ENSG00000165138.18	novel	646	3	NA	NA	149	2275	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	218.663760143285	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGCCTACTGGGTTTT	138	False	NA	-1	True	AATAAA	-19	NA	98796390	98781294	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_98781646_98782466_98782574_98783952_98784158_98784831_98784877_98790103_98790607_98796132
H1_mix_00088209	chr9	-	1406	3	FSM	ENSG00000255145.3	ENST00000529965.3	1652	3	24	222	24	-222	multi-exon	FALSE	canonical	2	6	junction_1	0.5	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAAAGCCTCTTTGGGCA	543	False	NA	NA	False	NA	NA	NA	99906577	99885439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_99886696_99894879_99895006_99906553
H1_mix_00088210	chr9	-	4441	2	FSM	ENSG00000136891.14	ENST00000477648.1	4457	2	-138	154	-138	-154	multi-exon	FALSE	canonical	3	734	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCACTGGGCATCCCCAAG	NA	False	NA	NA	False	NA	NA	NA	100308007	100302239	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_100302305_100303631
H1_mix_00088211	chr9	-	1034	3	NNC	ENSG00000136897.8	novel	3336	2	NA	NA	0	35677	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	612	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGGCTTCATTGCAAAAT	-9	True	NA	NA	False	AAAAAG	-1	NA	101398618	101351955	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_101351987_101389965_101390851_101398500
H1_mix_00088212	chr9	-	672	1	FSM	ENSG00000270332.3	ENST00000603949.1	672	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGTTAAGACAGACTGT	NA	False	NA	NA	False	AATAAA	-21	NA	104093073	104092401	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_104092400_104093100
H1_mix_00088214	chr9	-	286	1	FSM	ENSG00000237360.2	ENST00000431135.2	420	1	178	-44	178	44	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATACAAATCTTTTGCAAAA	NA	False	NA	NA	False	AATGAA	-41	NA	108097673	108097387	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_108097400_108097700
H1_mix_00088215	chr9	-	5141	37	NIC	ENSG00000070061.16	novel	5913	37	NA	NA	6	-74	combination_of_known_junctions	FALSE	canonical	1	3	junction_33	47.1430300020881	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATATTTTATTTTCATGG	10	True	NA	-86	True	NA	NA	NA	108934090	108868246	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_108869183_108874894_108874971_108877994_108878150_108878622_108878751_108879445_108879558_108880051_108880166_108881704_108881766_108882124_108882188_108889331_108889394_108891202_108891405_108892985_108893084_108893942_108894067_108896495_108896645_108896952_108897039_108897147_108897286_108898501_108898582_108898670_108898750_108899821_108899896_108900259_108900376_108901424_108901531_108901627_108901682_108902838_108902943_108903562_108903670_108906302_108906486_108908304_108908405_108911009_108911181_108912263_108912495_108916203_108916298_108917546_108917671_108918810_108918902_108919252_108919350_108922841_108922928_108926522_108926596_108927371_108927454_108929768_108929922_108930996_108931202_108933863
H1_mix_00088217	chr9	-	7923	17	NNC	ENSG00000106771.13	novel	7999	18	NA	NA	32	-17	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_13	61.0068835767735	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGTGGTAAACTTAATCT	30	True	NA	-15	True	AATAAA	-20	NA	109119915	109015151	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_109020506_109033306_109033502_109036205_109036381_109038016_109038118_109050282_109050429_109050569_109050693_109057190_109057323_109060353_109060453_109064476_109064568_109073355_109073439_109080838_109080944_109087172_109087343_109090921_109091153_109093474_109093592_109106507_109106610_109108452_109108571_109119334
H1_mix_00088219	chr9	-	8643	21	FSM	ENSG00000070159.14	ENST00000412145.5	8765	21	116	6	116	0	multi-exon	FALSE	canonical	2	6	junction_13	8.05776023470542	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTATTGTCTGTTGAC	NA	False	NA	NA	False	TATAAA	-19	NA	109451268	109375699	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_109379634_109381651_109381788_109382301_109382448_109383422_109383552_109389232_109389380_109391137_109391200_109391470_109391562_109404447_109404609_109406461_109406619_109408320_109408378_109409998_109410077_109410228_109410416_109420423_109420601_109422717_109422853_109426949_109427123_109428620_109428685_109433072_109433162_109436882_109436971_109438113_109438235_109445239_109445293_109448810
H1_mix_00088220	chr9	-	8508	20	FSM	ENSG00000070159.14	ENST00000446349.5	8630	20	116	6	116	0	multi-exon	FALSE	canonical	3	7	junction_13	7.34168080267116	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTATTGTCTGTTGAC	NA	False	NA	NA	False	TATAAA	-19	NA	109451268	109375699	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_109379634_109381651_109381788_109382301_109382448_109383422_109383552_109389232_109389380_109391137_109391200_109391470_109391562_109404447_109404609_109406461_109406619_109408320_109408378_109409998_109410077_109410228_109410416_109420423_109420601_109426949_109427123_109428620_109428685_109433072_109433162_109436882_109436971_109438113_109438235_109445239_109445293_109448810
H1_mix_00088222	chr9	-	540	2	FSM	ENSG00000136810.13	ENST00000487892.1	540	2	0	0	0	0	multi-exon	FALSE	canonical	3	8296	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCGTCTCATGTCTGAAT	7105	False	NA	-8	True	AATAAA	-23	NA	110245116	110244018	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_110244220_110244777
H1_mix_00088227	chr9	-	7990	15	FSM	ENSG00000119314.16	ENST00000334318.10	7990	15	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_14	101.723314206042	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGAGGCATTTTTATCAG	NA	False	NA	NA	False	AATAAA	-12	NA	112333664	112217715	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_112223984_112224132_112224211_112227410_112227628_112228379_112228473_112231379_112231414_112232098_112232239_112234819_112234898_112250928_112251104_112252677_112252789_112262434_112262600_112268048_112268196_112275843_112276014_112297831_112297917_112330440_112330475_112333469
H1_mix_00088229	chr9	-	3954	4	NIC	ENSG00000148153.14	novel	4114	5	NA	NA	20	-18	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	58.6590904198905	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGTGATTTCAAAGGCATA	18	True	NA	-32	True	AATAAA	-13	NA	112718066	112683943	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_112687634_112694130_112694234_112716460_112716542_112717986
H1_mix_00088230	chr9	-	894	5	FSM	ENSG00000148153.14	ENST00000481146.6	879	5	0	-15	0	0	multi-exon	FALSE	canonical	3	9	junction_2	63.663176169588	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTGCTGTTTATAGGAT	-2	True	NA	NA	False	AATGAA	-27	NA	112718086	112687116	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_112687634_112694130_112694234_112701787_112701881_112716460_112716542_112717986
H1_mix_00088233	chr9	-	4040	26	NNC	ENSG00000119321.10	novel	8766	28	NA	NA	4296	871	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_24	12.6196037972672	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGACCCAAGCCCTTGGAG	NA	False	NA	-39	True	AATAAA	-26	NA	113207296	113165523	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_113166156_113168459_113168557_113169223_113169943_113170521_113170630_113171580_113171707_113173452_113173606_113174427_113174584_113176536_113176674_113178629_113178802_113182765_113182869_113183750_113183846_113184291_113184400_113184694_113184805_113186248_113186364_113187792_113187900_113188388_113188492_113190470_113190579_113193491_113193550_113194026_113194170_113196931_113197079_113198854_113198924_113199813_113199964_113202530_113202630_113202960_113203031_113206508_113206579_113207211
H1_mix_00088236	chr9	-	875	4	NNC	ENSG00000176386.9	novel	871	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	234	junction_3	437.683548798546	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTATAACAGTACTGTT	6	True	NA	-56	True	AATAAA	-33	NA	113275572	113266991	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_113267440_113272426_113272549_113273328_113273439_113275377
H1_mix_00088237	chr9	-	2163	5	NNC	ENSG00000148229.13	novel	2194	5	NA	NA	0	69849	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	181.050407345579	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGATTTTTGGATTAGAT	19	True	NA	NA	False	AAAAAG	-26	NA	113410343	113337385	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_113337487_113407242_113408984_113409609_113409729_113410054_113410141_113410227
H1_mix_00088238	chr9	-	3327	6	Fusion	ENSG00000148229.13_ENSG00000119431.10	novel	2194	5	NA	NA	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	184.975025341261	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGACCTCCGAGGCTG	19	True	NA	NA	False	NA	NA	NA	113410343	113373887	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr9_-_113374530_113375452_113376075_113407241_113408984_113409609_113409729_113410054_113410141_113410227
H1_mix_00088239	chr9	-	3100	12	NIC	ENSG00000148218.16	novel	3129	12	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	2	4	junction_11	37.5519474905174	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTACTGAATGTCTTGTT	24	True	NA	-9	True	AATAAA	-44	NA	113401258	113386310	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_113388362_113388976_113389107_113389437_113389525_113389598_113389687_113389772_113389829_113390404_113390494_113390592_113390677_113390797_113390934_113391526_113391624_113392118_113392170_113393446_113393631_113401211
H1_mix_00088240	chr9	-	1262	10	FSM	ENSG00000106927.12	ENST00000265132.8	1262	10	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_4	2.11403306560449	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGTCCTCATTGTTCA	-2	True	NA	3	True	AATAAA	-24	NA	114078300	114060126	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_114060271_114060924_114061099_114061423_114061592_114062676_114062759_114069698_114069746_114072924_114073027_114074035_114074153_114074959_114075037_114076597_114076741_114078092
H1_mix_00088241	chr9	-	2325	15	NIC	ENSG00000136883.16	novel	2195	19	NA	NA	-478	0	intron_retention	FALSE	canonical	3	6	junction_12	6.10453160549186	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTTGGTTCTATCCTC	876	False	NA	-17	True	AATAAA	-19	NA	114098414	114091637	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_114092452_114092541_114092643_114093228_114093334_114093406_114093498_114093885_114093973_114094180_114094272_114094352_114094456_114095022_114095128_114095213_114095333_114096050_114096208_114096386_114096479_114097300_114097437_114097606_114097742_114098114_114098191_114098301
H1_mix_00088242	chr9	-	7365	22	FSM	ENSG00000106948.17	ENST00000307564.8	7380	22	0	15	0	-15	multi-exon	FALSE	canonical	0	0	junction_1	2.15814651307136	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGGGTAGTTTATGAAAAA	4075	False	NA	NA	False	TATAAA	-13	NA	114394405	114334170	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_114337307_114341532_114341726_114342008_114342126_114343707_114343804_114345862_114346010_114346668_114346785_114347723_114347901_114350858_114351022_114355924_114356137_114356862_114356970_114357920_114358168_114359593_114359795_114359895_114360063_114361703_114361912_114362405_114362534_114364559_114364620_114367542_114367698_114368438_114368596_114374092_114374168_114376465_114377533_114381059_114381447_114394356
H1_mix_00088243	chr9	-	3894	5	FSM	ENSG00000106948.17	ENST00000492875.1	3894	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.77263412660235	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATCCGTGTCTCTGCTGT	2198	False	NA	-6	True	AAAAAG	-27	NA	114346774	114336130	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_114337307_114341532_114341726_114342008_114342126_114343707_114346010_114346668
H1_mix_00088244	chr9	-	7116	23	NIC	ENSG00000041982.16	novel	8500	28	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_13	30.5627994585542	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGTCTTCTGGCTCCAA	925	False	NA	NA	False	AATAAA	-21	NA	115118138	115019574	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_115021268_115023972_115024137_115026533_115026696_115029359_115029457_115030253_115030406_115031552_115031686_115035203_115035335_115036097_115036242_115038260_115038381_115040940_115041085_115042218_115042342_115046409_115046683_115057152_115057426_115073602_115073867_115076031_115076122_115076389_115076576_115077942_115078213_115081771_115081929_115082691_115082808_115084208_115084473_115085863_115087274_115090561_115091155_115117981
H1_mix_00088245	chr9	-	4946	20	FSM	ENSG00000041982.16	ENST00000537320.5	4946	20	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_11	26.9128067836684	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATCCCTGGGGCCAACGG	NA	False	NA	NA	False	NA	NA	NA	115091141	115021028	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_115021268_115023972_115024137_115026533_115026696_115029359_115029457_115030253_115030406_115031552_115031686_115035203_115035335_115036097_115036242_115038260_115038381_115040940_115041085_115042218_115042342_115073602_115073867_115076031_115076122_115076389_115076576_115077942_115078213_115081771_115081929_115082691_115082808_115084208_115084473_115085863_115087274_115090561
H1_mix_00088246	chr9	-	6844	23	FSM	ENSG00000148219.18	ENST00000313400.9	6878	23	0	34	0	-34	multi-exon	FALSE	canonical	2	7	junction_20	17.2507635476	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTCTGATTAAAAGAAAGA	-10	True	NA	NA	False	NA	NA	NA	117415057	116423145	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_116426089_116440608_116440793_116442452_116442554_116487358_116487501_116618323_116618473_116620309_116620444_116651527_116651794_116725770_116725951_116728991_116729097_116733398_116733524_116805631_116805821_116820616_116820784_116863582_116863734_116975207_116975346_116976113_116976189_116976700_116976786_117008091_117008260_117039818_117039966_117096043_117096152_117141325_117141479_117214357_117214743_117291325_117291514_117414496
H1_mix_00088249	chr9	-	337	1	FSM	ENSG00000230734.1	ENST00000431607.1	468	1	126	5	126	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGATACTCCAGATCAG	NA	False	NA	NA	False	AATAAA	-28	NA	117180969	117180632	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_117180600_117181000
H1_mix_00088254	chr9	-	401	2	FSM	ENSG00000095261.14	ENST00000496688.1	384	2	0	-17	0	17	multi-exon	FALSE	canonical	2	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCATCCACCCTGATGAAG	NA	False	NA	NA	False	ATTAAA	-3	NA	120831401	120826577	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_120826908_120831330
H1_mix_00088255	chr9	-	3303	9	NNC	ENSG00000119403.15	novel	1092	9	NA	NA	20	-4	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_8	10.2827221590394	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAATTAATGTGTCTGAT	9640	False	NA	-29	True	AAAAAG	-44	NA	120868818	120855701	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_120858287_120860089_120860186_120861088_120861175_120862587_120862750_120864048_120864117_120865709_120865831_120866027_120866097_120866869_120866966_120868798
H1_mix_00088256	chr9	-	619	4	FSM	ENSG00000106804.8	ENST00000480188.1	619	4	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	7.93025150224688	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTATATAGATCATTTT	NA	False	NA	NA	False	NA	NA	NA	120962707	120956960	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_120957369_120960247_120960338_120961481_120961566_120962670
H1_mix_00088257	chr9	-	2960	21	NIC	ENSG00000106804.8	novel	540	3	NA	NA	11	5	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	14.4062486442516	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGATTCTATTACATTCCT	9	True	NA	-28	True	AATAAA	-16	NA	121050264	120999671	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_121000052_121005918_121006059_121006903_121006978_121008407_121008499_121013872_121014071_121015198_121015262_121016253_121016384_121017361_121017512_121017642_121017853_121019975_121020180_121021508_121021695_121023403_121023520_121025453_121025581_121027159_121027275_121030396_121030488_121032112_121032196_121034802_121034895_121037880_121037952_121043003_121043167_121046190_121046384_121050181
H1_mix_00088258	chr9	-	499	5	FSM	ENSG00000106804.8	ENST00000460578.1	521	5	0	22	0	-22	multi-exon	FALSE	canonical	1	4	junction_1	26.4054918530218	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTACTTTACTTTTGACA	NA	False	NA	NA	False	NA	NA	NA	121034826	121025717	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_121025904_121027159_121027275_121030396_121030488_121032112_121032196_121034802
H1_mix_00088259	chr9	-	2483	2	FSM	ENSG00000106852.16	ENST00000464484.3	666	2	29	-1846	0	-3	multi-exon	FALSE	canonical	1	2	junction_1	0	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGAACATGATGGGATTC	-7	True	NA	-3	True	AATAAA	-32	NA	122213893	122202585	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_122204781_122213605
H1_mix_00088264	chr9	-	4081	2	Fusion	ENSG00000171448.9_ENSG00000186130.5	novel	4099	2	NA	NA	21	0	multi-exon	FALSE	canonical	2	3	junction_1	0	255	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAATGTGTTTTGTCTTC	17	True	NA	-4	True	AATAAA	-18	NA	122931491	122908055	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr9_-_122912082_122931436
H1_mix_00088265	chr9	-	1853	2	NNC	ENSG00000171448.9	novel	4455	2	NA	NA	9	-55	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGGTTGCCTATTGAT	5	True	NA	-61	True	NA	NA	NA	122931503	122918154	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_122919945_122931440
H1_mix_00088266	chr9	-	3363	19	NNC	ENSG00000165209.19	novel	6451	19	NA	NA	0	331	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_18	161.312976983285	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTTGTTCTTGTGGCCT	-4	True	NA	-3	True	AATAAA	-18	NA	123268586	123124707	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_123125674_123128213_123128259_123132844_123132969_123136040_123136182_123136380_123136516_123139528_123139688_123146854_123147055_123147777_123147871_123158011_123158124_123158331_123158430_123159095_123159208_123160366_123160463_123160976_123161069_123169901_123170047_123173676_123173843_123179006_123179228_123184131_123184299_123236829_123236970_123268435
H1_mix_00088268	chr9	-	1017	9	NNC	ENSG00000136930.13	novel	984	8	NA	NA	0	71986	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	728.360830907319	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGACATGGAAAGTAGCTA	-3	True	NA	NA	False	AAAAAG	-9	NA	124415442	124281478	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_124281517_124353469_124353710_124356763_124356916_124384597_124384657_124405316_124405433_124412351_124412493_124413907_124414006_124414841_124414936_124415363
H1_mix_00088269	chr9	-	1010	9	NNC	ENSG00000136930.13	novel	984	8	NA	NA	0	14447	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	728.360830907319	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATGGGGCTGGAGAGCTG	-3	True	NA	NA	False	NA	NA	NA	124415442	124339017	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_124339046_124353466_124353710_124356763_124356916_124384597_124384657_124405316_124405433_124412351_124412493_124413907_124414006_124414841_124414936_124415363
H1_mix_00088271	chr9	-	968	7	FSM	ENSG00000136930.13	ENST00000498485.5	967	7	0	-1	0	0	multi-exon	FALSE	canonical	1	1	junction_6	975.589294848105	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGGCACTGTGTGGTG	180	False	NA	-4	True	AATAAA	-27	NA	124415291	124353464	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_124353710_124356763_124356916_124384597_124384657_124412351_124412493_124413907_124414006_124414841_124414936_124415112
H1_mix_00088273	chr9	-	7239	1	Genic_Genomic	ENSG00000231149.2_ENSG00000148200.17	novel	NA	NA	NA	NA	-6367	-247	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAAAGCTCTGTGCTGA	NA	False	NA	NA	False	AATAAA	-17	NA	124522423	124515184	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_-_124515200_124522400
H1_mix_00088277	chr9	-	469	5	NNC	ENSG00000136942.15	novel	493	5	NA	NA	0	52081	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11141.1415343088	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAACAACAACAACAATAA	7100	False	NA	NA	False	NA	NA	NA	124861936	124805798	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_124805834_124857879_124858068_124860182_124860265_124861418_124861556_124861909
H1_mix_00088278	chr9	-	487	5	NNC	ENSG00000136942.15	novel	452	4	NA	NA	0	52081	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11141.1415343088	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAACAACAACAACAATAA	-2	True	NA	NA	False	NA	NA	NA	124861957	124805798	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_124805835_124857883_124858068_124860182_124860265_124861418_124861556_124861909
H1_mix_00088279	chr9	-	769	5	NNC	ENSG00000173611.18	novel	546	2	NA	NA	0	-52306	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_3	17.8044938147649	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTTCTTTCATTGCTTG	6115	False	125143547	-21	True	AATAAA	-14	NA	125143528	125052216	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_125052596_125055875_125056008_125065989_125066059_125142632_125142678_125143384
H1_mix_00088280	chr9	-	4467	8	FSM	ENSG00000119414.12	ENST00000451402.5	4349	8	-85	-33	-85	32	multi-exon	FALSE	canonical	3	5	junction_7	185.545307740427	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTTTTTTTTTGTTTTGC	NA	False	NA	31	True	NA	NA	NA	125190024	125146540	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_125149922_125153532_125153743_125153905_125153986_125158240_125158383_125160840_125160907_125171084_125171181_125188918_125188948_125189561
H1_mix_00088281	chr9	-	2561	9	NNC	ENSG00000044574.9	novel	3921	8	NA	NA	0	70635	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2035.29143720869	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTGAGGGAGAGACATAG	-3	True	NA	NA	False	AAAAAG	-1	NA	125241342	125164217	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_125164245_125236238_125237155_125238140_125238309_125238589_125238828_125238940_125239332_125239420_125239534_125240171_125240310_125240675_125240908_125241004
H1_mix_00088282	chr9	-	2560	9	NNC	ENSG00000044574.9	novel	3921	8	NA	NA	0	70635	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2035.29143720869	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTGAGGGAGAGACATAG	-3	True	NA	NA	False	AAAAAG	-1	NA	125241342	125164217	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_125164244_125236238_125237155_125238140_125238309_125238589_125238828_125238940_125239332_125239420_125239534_125240171_125240310_125240675_125240908_125241004
H1_mix_00088283	chr9	-	4288	7	FSM	ENSG00000044574.9	ENST00000679475.1	4281	7	0	-7	0	0	multi-exon	FALSE	canonical	3	5358	junction_5	463.371131551757	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTGTCTGATGTCTATA	-5	True	NA	-8	True	ATTAAA	-15	NA	125241344	125234852	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_125237155_125238140_125238309_125238589_125238828_125238940_125239332_125239420_125239534_125240171_125240908_125241004
H1_mix_00088284	chr9	-	4246	7	FSM	ENSG00000044574.9	ENST00000680257.1	4234	7	0	-12	0	5	multi-exon	FALSE	canonical	3	5358	junction_4	264.323297413519	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGATGTCTATAGTTTG	NA	False	NA	-3	True	ATTAAA	-20	NA	125241382	125234847	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_125237155_125238140_125238828_125238940_125239332_125239420_125239534_125240171_125240310_125240675_125240908_125241004
H1_mix_00088287	chr9	-	3045	11	FSM	ENSG00000119487.17	ENST00000373503.7	3045	11	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_10	265.402128853557	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGCATATTGTGTTGAG	-7	True	NA	NA	False	AATAAA	-18	NA	125707212	125437393	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_125439013_125444500_125444599_125467971_125468110_125484442_125484584_125506309_125506418_125543058_125543169_125559632_125559810_125585554_125585728_125657650_125657800_125669817_125669908_125706970
H1_mix_00088290	chr9	-	1353	3	NIC	ENSG00000136859.10	novel	312	2	NA	NA	13	-2	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	20.5	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCAGTGCTTTCGGTACC	113	False	NA	NA	False	CATAAA	-20	NA	127122621	127106926	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_127107107_127107914_127108781_127122314
H1_mix_00088291	chr9	-	648	9	NNC	ENSG00000197958.13	novel	634	7	NA	NA	0	79667	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3984.33240173307	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTCTATGAAGGTTAAAAA	60	False	NA	NA	False	AAAAAG	-2	NA	127451373	127368006	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_127368033_127413947_127413973_127447677_127447727_127447876_127447990_127448336_127448424_127449280_127449363_127449609_127449709_127450730_127450805_127451280
H1_mix_00088294	chr9	-	1805	4	NIC	ENSG00000160404.18	novel	1500	5	NA	NA	0	1	intron_retention	FALSE	canonical	3	46	junction_3	21.4631467093403	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTTGCTAAGACTTTTA	-5	True	NA	-7	True	AATAAA	-20	NA	127735313	127731522	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_127732692_127733384_127733561_127734298_127734565_127735119
H1_mix_00088300	chr9	-	3335	14	NNC	ENSG00000257524.6	novel	3286	15	NA	NA	7	24095	intron_retention	FALSE	non_canonical	0	0	junction_1	141.008455829374	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATATATATATATATGT	16	True	NA	NA	False	NA	NA	NA	127899574	127843754	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_127843789_127867839_127868077_127868320_127868513_127871822_127871940_127872689_127872854_127873025_127873062_127874610_127874650_127885185_127886789_127887483_127887592_127890636_127891044_127894511_127894692_127896241_127896333_127897955_127898011_127899502
H1_mix_00088301	chr9	-	3309	13	NNC	ENSG00000257524.6	novel	1947	13	NA	NA	-12	24095	intron_retention	FALSE	non_canonical	0	0	junction_1	146.780069794536	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATATATATATATATGT	-13	True	NA	NA	False	NA	NA	NA	127899603	127843754	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_127843789_127867839_127868077_127868320_127868513_127871822_127871940_127872689_127872854_127873025_127873062_127874610_127874650_127885185_127886789_127887483_127887592_127890636_127891044_127894511_127894692_127896241_127896333_127899502
H1_mix_00088305	chr9	-	1617	7	NNC	ENSG00000136840.19	novel	1706	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	7	junction_1	37.2812136187771	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTCTAGCGTGGTCA	21	True	NA	-10	True	NA	NA	NA	127916996	127907885	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_127908172_127908215_127908582_127909950_127910059_127912267_127912681_127914655_127914842_127916407_127916495_127916825
H1_mix_00088306	chr9	-	2171	6	NIC	ENSG00000136840.19	novel	1706	6	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_2	39.1387276236722	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTCTAGCGTGGTCA	-19	True	NA	-10	True	NA	NA	NA	127917036	127907885	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_127908582_127909950_127910529_127912267_127912681_127914655_127914842_127916407_127916495_127916825
H1_mix_00088307	chr9	-	1013	5	FSM	ENSG00000136840.19	ENST00000361444.3	1013	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	38.0878917767839	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGCCAAGAAGAGGCCCA	21	True	NA	NA	False	NA	NA	NA	127916996	127908446	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127908582_127909950_127910059_127912267_127912681_127914655_127914842_127916825
H1_mix_00088308	chr9	-	1612	4	NIC	ENSG00000167103.12	novel	1104	5	NA	NA	-12	-5	intron_retention	FALSE	canonical	3	21	junction_2	31.1376870617513	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCATGTGACAGGCCCT	7942	False	NA	-13	True	ATTAAA	-14	NA	127927469	127920885	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_127922115_127925106_127925261_127927152_127927209_127927296
H1_mix_00088310	chr9	-	1951	2	ISM	ENSG00000136908.18	ENST00000495270.1	1662	3	5	0	-3	0	intron_retention	FALSE	canonical	3	1139	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTGTGCCGTGTTTAC	20	True	NA	-9	True	AATAAA	-16	NA	127937821	127935098	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_127935781_127936552
H1_mix_00088311	chr9	-	2043	8	NNC	ENSG00000148334.16	novel	1598	7	NA	NA	0	15534	intron_retention	FALSE	canonical	0	0	junction_1	485.00098884814	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGGGAGTGTTGGCTCAC	-6	True	NA	NA	False	NA	NA	NA	128128146	128105158	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_128105187_128120692_128121274_128122361_128122480_128122933_128123135_128123701_128123852_128124491_128124551_128125243_128125442_128127438
H1_mix_00088312	chr9	-	2110	7	FSM	ENSG00000148334.16	ENST00000496594.5	2103	7	0	-7	0	0	multi-exon	FALSE	canonical	3	83	junction_5	470.018232506877	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATGGCAGGCATCTCAT	18	True	NA	-24	True	AATAAA	-19	NA	128127717	128120715	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128121274_128122361_128123135_128123701_128123852_128124491_128124551_128124778_128124872_128125243_128125442_128127438
H1_mix_00088314	chr9	-	1748	7	FSM	ENSG00000148334.16	ENST00000678916.1	1748	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	401.324231624367	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATGGCAGGCATCTCAT	0	True	NA	-24	True	AATAAA	-19	NA	128127735	128120715	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128121274_128122361_128122647_128122933_128123135_128123701_128123852_128124491_128124551_128125243_128125442_128127438
H1_mix_00088316	chr9	-	2854	16	FSM	ENSG00000148337.22	ENST00000629610.2	2855	16	0	1	0	-1	multi-exon	FALSE	canonical	0	0	junction_14	146.168487255861	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCAGTTCCCACCAGTACT	-5	True	NA	-18	True	AATAAA	-17	NA	128191572	128166069	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128166407_128166758_128166881_128167094_128167165_128169051_128169202_128169405_128169520_128170019_128170108_128176350_128176476_128177565_128177764_128178368_128178491_128178708_128179416_128180414_128180524_128180720_128180815_128185546_128185777_128187862_128187935_128190687_128190863_128191431
H1_mix_00088318	chr9	-	2843	17	NIC	ENSG00000148337.22	novel	2975	17	NA	NA	2	-4	intron_retention	FALSE	canonical	3	50	junction_3	134.059629922658	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAATGCTTTTTAGGAGT	12	True	NA	-104	True	NA	NA	NA	128191555	128166155	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_128166407_128166758_128166881_128167094_128167165_128169075_128169202_128169405_128169520_128170019_128170108_128176350_128176476_128177565_128177764_128178368_128178491_128178708_128179416_128180414_128180524_128180720_128180815_128185546_128185777_128187862_128187935_128190328_128190445_128190687_128190863_128191431
H1_mix_00088322	chr9	-	904	6	FSM	ENSG00000148337.22	ENST00000467178.5	904	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	183.829703802188	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGCAGCAGGAGGCAGAG	10	True	NA	NA	False	NA	NA	NA	128191557	128179116	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128179416_128180414_128180524_128180720_128180800_128190328_128190445_128190687_128190863_128191431
H1_mix_00088328	chr9	-	1170	6	NNC	ENSG00000160446.19	novel	1146	5	NA	NA	0	42422	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	208.158209062242	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGTGGTCTCTACACAT	-10	True	NA	NA	False	NA	NA	NA	128724121	128678447	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_128678478_128720872_128721503_128721650_128721818_128722008_128722087_128722437_128722575_128723993
H1_mix_00088329	chr9	-	1125	5	NNC	ENSG00000160446.19	novel	1146	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_2	204.633208448678	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACCATATCACTCCTTGC	2	True	NA	-16	True	TATAAA	-22	NA	128724109	128720872	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_128721503_128721650_128721815_128722008_128722087_128722437_128722575_128723993
H1_mix_00088334	chr9	-	661	6	FSM	ENSG00000198917.13	ENST00000480366.1	661	6	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_2	49.3290989173733	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTCATCCAGGCGGGTGC	3577	False	NA	NA	False	NA	NA	NA	128826223	128822797	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128822834_128823746_128823895_128824071_128824175_128824770_128824870_128824976_128825050_128826021
H1_mix_00088336	chr9	-	1754	2	ISM	ENSG00000171097.14	ENST00000483599.5	2490	13	25686	-126	665	-55	3prime_fragment	FALSE	canonical	3	208	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGCACAACCAGGCCTAG	NA	False	NA	-60	True	NA	NA	NA	128834846	128832996	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_128833644_128833739
H1_mix_00088337	chr9	-	2034	13	FSM	ENSG00000171097.14	ENST00000462722.5	2089	13	0	55	0	-55	multi-exon	FALSE	canonical	3	17	junction_6	45.3378521032187	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGCACAACCAGGCCTAG	22	True	NA	-60	True	NA	NA	NA	128882036	128832996	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128833644_128833739_128833827_128835322_128835403_128835480_128835668_128835778_128835869_128835996_128836106_128836801_128836923_128837684_128837814_128838050_128838138_128838217_128838368_128842653_128842802_128845352_128845412_128881896
H1_mix_00088339	chr9	-	1365	12	FSM	ENSG00000148341.18	ENST00000372559.5	1365	12	0	0	0	0	multi-exon	FALSE	canonical	1	20	junction_1	186.11286898009	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGCTCCTGTCAGGGCC	-1	True	NA	-5	True	AATAAA	-21	NA	129028214	129008033	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_129008151_129008683_129008792_129009105_129009347_129009770_129009872_129010119_129010210_129010669_129010694_129012235_129012299_129014410_129014504_129014770_129014905_129021090_129021220_129022281_129022424_129028091
H1_mix_00088343	chr9	-	412	1	FSM	ENSG00000287234.1	ENST00000670830.1	411	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACGTCTATGCTACTTAAT	NA	False	NA	-4	True	AATAAA	-16	NA	129080765	129080353	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_129080400_129080800
H1_mix_00088344	chr9	-	2689	1	FSM	ENSG00000188483.8	ENST00000372491.4	2710	1	17	4	17	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATGGTGGTGCCTTGT	13	False	NA	NA	False	AATAAA	-12	NA	129178244	129175555	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_129175600_129178200
H1_mix_00088345	chr9	-	377	1	FSM	ENSG00000236146.2	ENST00000444641.2	335	1	-56	14	-56	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCTGTAACTAATGATAT	NA	False	NA	NA	False	NA	NA	NA	129380526	129380149	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_129380100_129380500
H1_mix_00088348	chr9	-	5370	17	NIC	ENSG00000187239.17	novel	5420	17	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	15	junction_6	18.7178891705235	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGTGTCACGGGACTGTTT	6	True	NA	-8	True	AATAAA	-15	NA	130043167	129887184	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_129890547_129895837_129895997_129899964_129900102_129900425_129900548_129902868_129903002_129908889_129909000_129915965_129915981_129923843_129923997_129924959_129925158_129927194_129927342_129929566_129929696_129957359_129957465_129958490_129958554_129978464_129978613_129979317_129979375_129994842_129994959_130042951
H1_mix_00088349	chr9	-	2256	14	FSM	ENSG00000187239.17	ENST00000449089.6	2256	14	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	13.4476851794794	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAAAGTGTGTGTTTTTA	860	False	NA	-7	True	AGTAAA	-19	NA	129994867	129895267	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_129895997_129899964_129900102_129900425_129900548_129902868_129903002_129908889_129909000_129923843_129923997_129924959_129925158_129927194_129927342_129929566_129929696_129957359_129957465_129958490_129958554_129978464_129978613_129979317_129979375_129994842
H1_mix_00088350	chr9	-	2333	15	ISM	ENSG00000187239.17	ENST00000420781.5	5410	16	45	8323	18	-242	5prime_fragment	FALSE	canonical	3	33	junction_5	9.85921303313064	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTCATCTTTCTGAATT	72	False	NA	NA	False	ATTAAA	-18	NA	130043149	129895509	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_129895997_129899964_129900102_129900425_129900548_129902868_129903002_129908889_129909000_129923843_129924027_129924959_129925158_129927194_129927342_129929566_129929696_129957359_129957465_129958490_129958554_129978464_129978613_129979317_129979375_129994842_129994959_130042951
H1_mix_00088352	chr9	-	414	3	FSM	ENSG00000130720.13	ENST00000463475.1	385	3	-25	-4	-25	4	multi-exon	FALSE	canonical	3	9	junction_2	24	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGGGTATTGTGATTTTC	8187	False	NA	2	True	AATAAA	-20	NA	130939311	130938012	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_130938216_130938535_130938649_130939213
H1_mix_00088353	chr9	-	2051	7	FSM	ENSG00000130717.13	ENST00000372210.7	2051	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	175.594624696265	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCAGTTGGTTCCTTTTTT	20	True	NA	-4	True	AATAAA	-21	NA	131531179	131523800	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_131525222_131525928_131525978_131528943_131529039_131529127_131529271_131529487_131529585_131530485_131530646_131531093
H1_mix_00088354	chr9	-	2063	6	FSM	ENSG00000130717.13	ENST00000372208.7	2063	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	199.419758298921	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCAGTTGGTTCCTTTTTT	-4	True	NA	-4	True	AATAAA	-21	NA	131531259	131523800	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_131525222_131525928_131525978_131529127_131529271_131529487_131529585_131530485_131530646_131531066
H1_mix_00088355	chr9	-	6256	24	NNC	ENSG00000107263.19	novel	6256	24	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	99.1594923087741	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGCGCCCAGCTGCATG	-27	True	NA	-2	True	AATAAA	-26	NA	131740122	131576769	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_131579648_131580262_131580392_131582604_131582703_131584310_131584413_131584517_131584597_131587735_131587831_131587941_131588027_131588848_131588987_131589885_131589975_131592094_131592184_131596297_131596374_131598198_131598311_131602060_131602150_131621795_131621999_131625921_131626423_131627912_131628097_131628548_131628673_131629101_131629255_131630235_131630325_131638634_131638792_131643238_131643418_131650128_131650243_131650809_131650950_131739769
H1_mix_00088358	chr9	-	11261	26	NNC	ENSG00000107290.14	novel	11101	26	NA	NA	22	-84	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_25	24.6879403758191	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGTCTGCCATTTGGTTT	16	True	NA	-1	True	AGTAAA	-20	NA	132354964	132261439	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_132264986_132269614_132269703_132271709_132271809_132275255_132275421_132277059_132277153_132278069_132278258_132281466_132281575_132283263_132283414_132286422_132286495_132288235_132288352_132288549_132288652_132295871_132296029_132296886_132297055_132298079_132298313_132300629_132300804_132311756_132311857_132326323_132330500_132331051_132331140_132331276_132331449_132334607_132334728_132336295_132336516_132342689_132342800_132346260_132346472_132349251_132349436_132353648_132353756_132354650
H1_mix_00088359	chr9	-	1763	10	FSM	ENSG00000125482.13	ENST00000612514.4	1780	10	17	0	6	0	multi-exon	FALSE	canonical	3	39	junction_9	45.0777106783386	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGGAACATATGAATTGA	-4	True	NA	64	True	ATTAAA	-42	NA	132406834	132375547	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_132376169_132379058_132379145_132386555_132386622_132388138_132388229_132390596_132390832_132392075_132392207_132396432_132396512_132398140_132398327_132400034_132400259_132406789
H1_mix_00088360	chr9	-	2119	3	NIC	ENSG00000125485.18	novel	4159	20	NA	NA	-19076	-1292	combination_of_known_splicesites	FALSE	canonical	3	7	junction_2	41.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGTGGTCCCTCTTATTT	NA	False	NA	-1	True	NA	NA	NA	132631389	132594288	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_132595113_132612086_132612256_132630263
H1_mix_00088361	chr9	-	6899	9	FSM	ENSG00000165699.15	ENST00000647262.1	3917	9	447	-3429	0	0	multi-exon	FALSE	canonical	3	42	junction_6	9.52545930651116	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCTGTGTGGACATGGA	5528	False	NA	-2	True	AATAAA	-20	NA	132906095	132891348	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_132896755_132897183_132897346_132897422_132897611_132900714_132900838_132901588_132901700_132902604_132902788_132903650_132903818_132904410_132904455_132905580
H1_mix_00088363	chr9	-	8715	23	FSM	ENSG00000165699.15	ENST00000644097.1	8715	23	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_12	29.9127173816928	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTCTGCTGTGTGGACA	619	False	NA	-6	True	AATAAA	-16	NA	132944769	132891352	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_132896755_132897183_132897346_132897422_132897611_132900714_132900838_132901588_132901700_132902604_132902788_132903650_132903818_132904410_132904455_132905580_132906140_132906730_132906836_132907300_132907371_132910570_132910690_132911001_132911114_132911452_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944571
H1_mix_00088367	chr9	-	5596	12	FSM	ENSG00000160271.16	ENST00000482648.5	5596	12	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	11.2844513812239	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTCATTACAGTTTTG	4794	False	NA	NA	False	ATTAAA	-18	NA	133108792	133097719	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133101763_133101937_133102140_133102475_133102572_133102778_133102901_133103229_133103263_133103746_133103834_133104262_133104332_133105931_133106017_133106644_133106749_133107084_133107301_133107987_133108407_133108672
H1_mix_00088368	chr9	-	5817	11	FSM	ENSG00000160271.16	ENST00000469972.5	5817	11	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_6	9.17387595294377	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTCATTACAGTTTTG	4748	False	NA	NA	False	ATTAAA	-18	NA	133108838	133097719	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133102140_133102475_133102572_133102778_133102901_133103229_133103263_133103746_133103834_133104262_133104332_133105931_133106017_133106644_133106749_133107084_133107301_133107987_133108407_133108672
H1_mix_00088369	chr9	-	4602	18	FSM	ENSG00000160271.16	ENST00000493438.5	4602	18	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_17	38.462942215533	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTCATTACAGTTTTG	-3	True	NA	NA	False	ATTAAA	-18	NA	133121156	133097719	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133098763_133100267_133100383_133100495_133101763_133101937_133102140_133102475_133102572_133102778_133102901_133103229_133103263_133103746_133103834_133104262_133104332_133105931_133106017_133106644_133106749_133107084_133107301_133107987_133108407_133108672_133108867_133109625_133109686_133110295_133110490_133112041_133112153_133120971
H1_mix_00088370	chr9	-	3598	18	FSM	ENSG00000160271.16	ENST00000372047.7	3598	18	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_17	31.2273724307271	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTCATTACAGTTTTG	9964	False	NA	NA	False	ATTAAA	-18	NA	133121176	133097719	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133098763_133100267_133100383_133101519_133101763_133101937_133102140_133102475_133102572_133102778_133102901_133103229_133103263_133103746_133103834_133104262_133104332_133105931_133106017_133106644_133106749_133107084_133107301_133107987_133108407_133108672_133108867_133109625_133109686_133110295_133110490_133112041_133112153_133120971
H1_mix_00088371	chr9	-	1218	3	FSM	ENSG00000160271.16	ENST00000498797.1	1052	3	332	-498	0	-1	multi-exon	FALSE	canonical	3	113	junction_2	10	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCCTGGTCATTACAGTT	NA	False	NA	NA	False	ATTAAA	-15	NA	133101582	133097722	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133098763_133100267_133100383_133101519
H1_mix_00088373	chr9	-	931	5	FSM	ENSG00000148290.10	ENST00000495952.5	931	5	0	0	0	0	multi-exon	FALSE	canonical	3	600	junction_3	37.9300342736465	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCAAGACTGCCTTTAT	9147	False	NA	-71	True	NA	NA	NA	133354253	133351874	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133351983_133352060_133352143_133352445_133352609_133352693_133352767_133353748
H1_mix_00088375	chr9	-	3148	6	FSM	ENSG00000148248.14	ENST00000613129.4	3148	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	559.776026639227	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCGTTGCCCAGCCTGAA	NA	False	NA	-1	True	AATAAA	-32	NA	133376166	133361449	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133363760_133364839_133365027_133365984_133366029_133366598_133366676_133367258_133367544_133375921
H1_mix_00088376	chr9	-	400	2	FSM	ENSG00000148248.14	ENST00000465565.1	400	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAAGGACTGGTTCGGGGT	9983	False	NA	-113	True	NA	NA	NA	133366077	133363452	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133363760_133365984
H1_mix_00088377	chr9	-	2410	10	NIC	ENSG00000160326.14	novel	2491	10	NA	NA	5	11	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	40.4557371291967	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGAGTGGGGTCTACTCC	6	True	NA	-4	True	AATAAA	-27	NA	133479122	133471082	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_133472177_133473104_133473251_133473414_133473601_133473979_133474089_133474960_133475114_133475399_133475497_133476236_133476337_133477034_133477242_133478253_133478417_133478967
H1_mix_00088379	chr9	-	4640	27	NIC	ENSG00000160293.17	novel	5101	28	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	2	11	junction_26	53.7655578144651	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGGTCAGCCTTTCGTAC	579	False	NA	-1	True	AATAAA	-20	NA	133992259	133761892	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_133764110_133768441_133768597_133769416_133769504_133770377_133770502_133771958_133772047_133774934_133775052_133776027_133776081_133777388_133777464_133778761_133778890_133779917_133779940_133780693_133780711_133783502_133783592_133784316_133784419_133785775_133785886_133788353_133788487_133789257_133789344_133791782_133791870_133795667_133795737_133796428_133796525_133797709_133797810_133806080_133806182_133807257_133807327_133809039_133809139_133812113_133812217_133834271_133834341_133861373_133861433_133992074
H1_mix_00088384	chr9	-	7344	6	NNC	ENSG00000148411.8	novel	6903	6	NA	NA	-1692	1	at_least_one_novel_splicesite	TRUE	canonical	3	13	junction_5	14.5189531303052	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGGACTTGGCTTGGC	NA	False	NA	1	True	AATAAA	-18	NA	136052272	136006535	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_136012025_136013198_136013297_136013863_136013970_136016264_136016430_136049635_136050581_136051731
H1_mix_00088385	chr9	-	2858	3	NNC	ENSG00000238227.8	novel	2827	2	NA	NA	0	29443	intron_retention	FALSE	non_canonical	0	0	junction_1	123	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAGAAATGGAGTCTTCC	9	True	NA	NA	False	NA	NA	NA	136118875	136085137	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_136085164_136114583_136117025_136118484
H1_mix_00088386	chr9	-	6466	3	ISM	ENSG00000165661.17	ENST00000455222.1	851	7	7075	-4923	7075	-8	3prime_fragment	FALSE	canonical	3	21	junction_2	4	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAAATGGTGATTCTTT	9294	False	NA	NA	False	AATAAA	-14	NA	136217802	136206340	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_136211453_136215153_136215305_136216599
H1_mix_00088387	chr9	-	385	1	FSM	ENSG00000262075.3	ENST00000573103.2	5021	1	-8	4644	-8	-4644	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCCCCCCACCTCTGAG	4415	False	NA	NA	False	AATACA	-28	NA	136327331	136326946	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136326900_136327300
H1_mix_00088390	chr9	-	2429	9	ISM	ENSG00000165689.17	ENST00000357365.8	2391	10	21	29	0	0	intron_retention	FALSE	canonical	3	69	junction_8	128.096094300334	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTAATAAATTCTGTAG	-20	True	NA	-39	True	TTTAAA	-36	NA	136410593	136401950	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_136402888_136404054_136404195_136404630_136404694_136405090_136405203_136405904_136405979_136407144_136407562_136407825_136407939_136408998_136409068_136410089
H1_mix_00088395	chr9	-	8923	31	NIC	ENSG00000148396.19	novel	9018	32	NA	NA	-27	0	intron_retention	FALSE	canonical	3	61	junction_3	40.2917278524182	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCTTCACCTGTGGTTCC	-20	True	NA	-9	True	AATAAA	-20	NA	136483067	136440104	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_136441824_136443822_136443901_136445051_136445112_136445644_136445720_136446854_136446950_136447226_136447365_136447568_136447681_136447852_136447910_136448083_136448162_136451255_136451409_136453427_136453511_136454108_136454328_136455600_136455794_136456052_136456167_136457443_136457585_136459133_136459240_136459443_136459556_136459756_136459875_136460041_136460124_136461176_136461275_136462886_136463133_136463462_136463602_136463678_136463741_136464419_136464563_136465961_136466137_136466263_136466463_136466956_136467084_136468414_136468513_136471974_136472112_136474048_136477685_136482937
H1_mix_00088396	chr9	-	9587	35	NNC	ENSG00000148400.13	novel	9649	35	NA	NA	4	4279	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	26.5696837934856	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCGTTAGTGGAGGTC	2	True	NA	NA	False	AAAAAG	-1	NA	136546044	136490153	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_136490191_136494446_136497559_136498898_136498997_136499111_136499260_136500551_136500848_136501747_136501914_136502000_136502089_136502271_136502489_136503181_136503331_136504672_136505105_136505309_136505882_136506526_136506640_136506715_136506974_136507304_136507438_136507954_136508140_136508231_136508386_136508869_136509072_136509732_136509962_136510652_136510806_136511151_136511272_136513020_136513135_136513391_136513538_136514509_136514703_136515289_136515401_136515482_136515717_136515980_136516095_136517271_136517386_136517751_136517938_136518136_136518293_136518590_136518825_136519442_136519566_136522849_136523189_136523716_136523980_136544023_136544103_136545725
H1_mix_00088397	chr9	-	9589	35	NNC	ENSG00000148400.13	novel	9649	35	NA	NA	4	4279	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	26.5696837934856	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCGTTAGTGGAGGTC	2	True	NA	NA	False	AAAAAG	-1	NA	136546044	136490153	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_136490191_136494444_136497559_136498898_136498997_136499111_136499260_136500551_136500848_136501747_136501914_136502000_136502089_136502271_136502489_136503181_136503331_136504672_136505105_136505309_136505882_136506526_136506640_136506715_136506974_136507304_136507438_136507954_136508140_136508231_136508386_136508869_136509072_136509732_136509962_136510652_136510806_136511151_136511272_136513020_136513135_136513391_136513538_136514509_136514703_136515289_136515401_136515482_136515717_136515980_136516095_136517271_136517386_136517751_136517938_136518136_136518293_136518590_136518825_136519442_136519566_136522849_136523189_136523716_136523980_136544023_136544103_136545725
H1_mix_00088401	chr9	-	808	4	FSM	ENSG00000169692.13	ENST00000472820.1	808	4	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_3	4.64279609239471	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGATGGCTGGAGGATGGGC	8815	False	NA	NA	False	NA	NA	NA	136677380	136673708	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136673928_136674734_136674808_136676584_136676681_136676960
H1_mix_00088402	chr9	-	2157	2	FSM	ENSG00000233016.8	ENST00000447221.1	2157	2	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-2	True	NA	NA	False	NA	NA	NA	136728184	136725233	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136727087_136727880
H1_mix_00088403	chr9	-	1777	4	FSM	ENSG00000187922.14	ENST00000341040.11	1780	4	0	3	0	0	multi-exon	FALSE	canonical	1	4	junction_3	1.24721912892465	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTTGGAGCCCGGGCAA	0	True	NA	NA	False	AATAAA	-21	NA	136742940	136738169	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136739554_136739949_136740049_136741880_136742021_136742786
H1_mix_00088405	chr9	-	797	6	NNC	ENSG00000107223.13	novel	790	5	NA	NA	0	37793	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1123.73580524961	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAACCAAACCAAAAAACAA	4	True	NA	NA	False	NA	NA	NA	136866266	136824325	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_136824351_136862117_136862497_136862905_136863000_136863287_136863449_136863819_136863872_136866180
H1_mix_00088406	chr9	-	645	6	NNC	ENSG00000107223.13	novel	662	5	NA	NA	0	37793	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	972.610219975094	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAACCAAACCAAAAAACAA	4	True	NA	NA	False	NA	NA	NA	136866266	136824325	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_136824352_136862119_136862346_136862905_136863000_136863287_136863449_136863819_136863872_136866180
H1_mix_00088408	chr9	-	2557	10	NNC	ENSG00000159069.14	novel	2362	9	NA	NA	0	9725	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	200.813038777889	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCAGGGCAGGGCAAACGA	5412	False	136944705	NA	False	TTTAAA	-29	NA	136944687	136930709	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_136930956_136940434_136941172_136941250_136941464_136941536_136941685_136942045_136942467_136942546_136942696_136942768_136942944_136943348_136943507_136943890_136944107_136944593
H1_mix_00088409	chr9	-	2556	10	NNC	ENSG00000159069.14	novel	2362	9	NA	NA	0	9725	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	200.813038777889	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCAGGGCAGGGCAAACGA	5412	False	136944705	NA	False	TTTAAA	-29	NA	136944687	136930709	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_136930955_136940434_136941172_136941250_136941464_136941536_136941685_136942045_136942467_136942546_136942696_136942768_136942944_136943348_136943507_136943890_136944107_136944593
H1_mix_00088410	chr9	-	820	1	FSM	ENSG00000260190.1	ENST00000569497.1	820	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAAAGACCCATAAATTCT	6796	False	NA	NA	False	AATAAA	-30	NA	136937988	136937168	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136937200_136938000
H1_mix_00088412	chr9	-	1213	1	FSM	ENSG00000268996.3	ENST00000596585.3	1872	1	569	90	569	-90	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCCCACCACATGCCTG	567	False	NA	-92	True	NA	NA	NA	137086248	137085035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137085000_137086200
H1_mix_00088413	chr9	-	1640	12	ISM	ENSG00000176978.14	ENST00000371579.7	1601	13	32	-1	2	1	intron_retention	FALSE	canonical	3	105	junction_5	20.5526938171252	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTATGTCCCGTCCTTCCT	16	True	NA	-5	True	AATAAA	-18	NA	137114701	137110544	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_137110784_137110879_137110951_137111689_137111755_137111872_137112030_137112111_137112231_137112744_137112806_137112952_137113120_137113205_137113288_137113360_137113497_137113864_137114029_137114242_137114383_137114462
H1_mix_00088418	chr9	-	1797	7	FSM	ENSG00000148399.13	ENST00000479650.5	1797	7	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_6	72.6163816840862	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGAGTTTATAACATGTTT	7	True	NA	-13	True	ATTAAA	-18	NA	137578888	137554903	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137555649_137564433_137564607_137564892_137565155_137574207_137574381_137574751_137574844_137576079_137576168_137578624
H1_mix_00088419	chr9	-	1226	4	NIC	ENSG00000148399.13	novel	2302	9	NA	NA	9	-4	combination_of_known_splicesites	FALSE	canonical	3	26	junction_3	107.375768009154	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACACGAGTTTATAACAT	29	True	NA	-17	True	ATTAAA	-14	NA	137578866	137554907	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_137555649_137564433_137564607_137565084_137565155_137578624
H1_mix_00088428	chr9	+	3956	1	Intergenic	novelGene_1518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	318	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGATCTGGTAAGAACAAA	NA	False	NA	NA	False	NA	NA	NA	2794382	2798338	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_2794400_2798300
H1_mix_00088429	chr9	+	2988	1	Intergenic	novelGene_1522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCCCTCTCTCCCTTTTT	NA	False	NA	NA	False	NA	NA	NA	5705192	5708180	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_5705200_5708200
H1_mix_00088430	chr9	+	229	1	Intergenic	novelGene_1523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCAGACCAGCTAAGTCT	622	False	NA	NA	False	NA	NA	NA	6037856	6038085	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_6037900_6038100
H1_mix_00088431	chr9	+	223	1	Intergenic	novelGene_1526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGCGCACTGAGCACCT	NA	False	NA	NA	False	AAAAAG	-30	NA	12948376	12948599	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_12948400_12948600
H1_mix_00088432	chr9	+	3986	1	Intergenic	novelGene_1534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAGAACAAAGGTCATAC	NA	False	NA	NA	False	NA	NA	NA	14694937	14698923	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_14694900_14698900
H1_mix_00088433	chr9	+	274	1	Intergenic	novelGene_1538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CGTCTCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22999504	22999778	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_22999500_22999800
H1_mix_00088434	chr9	+	268	1	Intergenic	novelGene_1544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGCTTTGTCTAAAGGAA	4311	False	NA	NA	False	AGTAAA	-7	NA	34921356	34921624	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_34921400_34921600
H1_mix_00088435	chr9	+	476	1	Intergenic	novelGene_1547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACTTTGTA	NA	False	NA	NA	False	NA	NA	NA	35590785	35591261	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_35590800_35591300
H1_mix_00088436	chr9	+	2710	1	Intergenic	novelGene_1560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCTAGCAGCAGCATAAC	NA	False	NA	NA	False	NA	NA	NA	71759816	71762526	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_71759800_71762500
H1_mix_00088438	chr9	+	200	1	Intergenic	novelGene_1570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTGGCTTACAGTTTCA	NA	False	NA	NA	False	NA	NA	NA	85460213	85460413	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_85460200_85460400
H1_mix_00088439	chr9	+	841	1	Intergenic	novelGene_1571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGCATAATTCTCATAAAA	NA	False	NA	NA	False	NA	NA	NA	85461232	85462073	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_85461200_85462100
H1_mix_00088440	chr9	+	1976	1	Intergenic	novelGene_1573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGATGTCCATAGGTTAAAT	NA	False	NA	NA	False	TTTAAA	-10	NA	85542737	85544713	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_85542700_85544700
H1_mix_00088442	chr9	+	729	1	Intergenic	novelGene_1576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATCTCAGCATAATTCTC	NA	False	NA	NA	False	NA	NA	NA	90415268	90415997	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_90415300_90416000
H1_mix_00088443	chr9	+	234	1	Intergenic	novelGene_1582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCGGTCACGGACTGGGAA	NA	False	NA	NA	False	NA	NA	NA	94540383	94540617	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_94540400_94540600
H1_mix_00088444	chr9	+	2335	1	Intergenic	novelGene_1587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGGTCTAGGAAGCCCACTA	NA	False	NA	NA	False	NA	NA	NA	97235112	97237447	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_97235100_97237400
H1_mix_00088446	chr9	+	1277	1	Intergenic	novelGene_1592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCGGCGGGGCGGGGGGGG	NA	False	NA	NA	False	TTTAAA	-3	NA	103204369	103205646	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_103204400_103205600
H1_mix_00088447	chr9	+	289	1	Intergenic	novelGene_1605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCCCCAAAAATTTTCGCC	NA	False	NA	NA	False	NA	NA	NA	121795951	121796240	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_121796000_121796200
H1_mix_00088450	chr9	+	275	1	Intergenic	novelGene_1607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CGTCTCAAAAAAAAAAAAAA	5013	False	NA	NA	False	NA	NA	NA	127725282	127725557	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_127725300_127725600
H1_mix_00088451	chr9	+	929	1	Intergenic	novelGene_1608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTATTTATTTTTTGAGA	NA	False	NA	15	True	AATAAA	-16	NA	130708639	130709568	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_130708600_130709600
H1_mix_00088452	chr9	+	1052	1	Intergenic	novelGene_1610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGCGCACGCGCACGCAAT	NA	False	NA	NA	False	NA	NA	NA	137128690	137129742	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_137128700_137129700
H1_mix_00088453	chr9	+	402	3	NNC	ENSG00000107104.21	novel	2232	5	NA	NA	-16	-4066	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	10.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATGCTGAGGAGAGAGGT	NA	False	NA	NA	False	NA	NA	NA	470274	471391	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_470375_470555_470678_471211
H1_mix_00088454	chr9	+	1941	1	FSM	ENSG00000235330.2	ENST00000598100.1	674	1	-1290	23	-1290	-23	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAAACACAGCATGGTTA	6115	False	NA	NA	False	AATAAA	-21	NA	476459	478400	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_476500_478400
H1_mix_00088460	chr9	+	6948	24	NIC	ENSG00000096968.14	novel	2615	16	NA	NA	12	3	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	6.80764609601733	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCAGTTGTGTTTATGCC	NA	False	NA	NA	False	AATAAA	-24	NA	4984401	5129951	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_4984766_5021962_5022214_5029782_5029907_5044402_5044521_5050685_5050832_5054562_5054885_5055668_5055789_5064882_5065041_5066677_5066790_5069021_5069209_5069924_5070053_5072491_5072627_5073697_5073786_5077452_5077581_5078305_5078445_5080228_5080381_5080532_5080684_5081724_5081862_5089673_5089864_5090445_5090571_5090738_5090912_5123003_5123122_5126332_5126447_5126683
H1_mix_00088461	chr9	+	303	1	FSM	ENSG00000237158.1	ENST00000451028.1	517	1	-60	274	-60	-274	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATTGTGATGACTATAAC	NA	False	NA	NA	False	AAAACA	-23	NA	6568783	6569086	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_6568800_6569100
H1_mix_00088462	chr9	+	2900	2	FSM	ENSG00000225706.2	ENST00000447950.1	1668	2	-3	-1229	0	1229	multi-exon	FALSE	canonical	1	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTATTTATAATTAATATA	2	True	NA	NA	False	NA	NA	NA	8858126	8863484	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_8858324_8860781
H1_mix_00088464	chr9	+	1028	1	FSM	ENSG00000234297.2	ENST00000422292.2	996	1	26	-58	26	58	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGGAGCAAACAAGAGATG	NA	False	NA	NA	False	AATACA	-1	NA	15055082	15056110	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_15055100_15056100
H1_mix_00088465	chr9	+	5502	20	NNC	ENSG00000164989.17	novel	6553	26	NA	NA	70005	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	3.91318532535602	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGGGTATCTAACTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	15623295	15974037	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_15623414_15657126_15657220_15666162_15666324_15678757_15678897_15695234_15695338_15721768_15721876_15723656_15723747_15724775_15724977_15727868_15728037_15729609_15729799_15744272_15744778_15745514_15745632_15777599_15777827_15778967_15779151_15784508_15784695_15846701_15846848_15848892_15848948_15874531_15874664_15920269_15920423_15971608
H1_mix_00088466	chr9	+	1853	13	FSM	ENSG00000178031.18	ENST00000327883.11	1864	13	11	0	11	0	multi-exon	FALSE	canonical	0	0	junction_3	1.68942791105944	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTGTCAAAGCTGATGA	NA	False	NA	NA	False	ATTAAA	-20	NA	18474110	18684957	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_18474296_18504828_18504957_18533246_18533293_18574029_18574267_18622242_18622370_18635942_18636018_18639253_18639412_18657638_18657751_18661934_18662074_18675856_18675908_18680311_18680517_18681811_18681960_18684715
H1_mix_00088467	chr9	+	650	4	FSM	ENSG00000178031.18	ENST00000431052.6	824	4	0	174	0	-174	multi-exon	FALSE	canonical	0	0	junction_3	2.05480466765633	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCATCTTTACACTTTTTA	-1	True	NA	NA	False	NA	NA	NA	18474143	18574353	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_18474296_18504828_18504957_18533246_18533293_18574029
H1_mix_00088468	chr9	+	215	1	FSM	ENSG00000236680.1	ENST00000441073.1	1238	1	1069	-46	1069	46	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAAGATGGTTTAGAGGC	1068	False	NA	NA	False	NA	NA	NA	19027960	19028175	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_19028000_19028200
H1_mix_00088469	chr9	+	546	1	FSM	ENSG00000273226.1	ENST00000609982.1	546	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATAGTCCTCATCATTTC	NA	False	NA	NA	False	AATAAA	-15	NA	19375450	19375996	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_19375400_19376000
H1_mix_00088470	chr9	+	5343	40	NIC	ENSG00000188352.13	novel	6096	46	NA	NA	10260	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	50.537193130865	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCGTGTGACTTTTGTTT	NA	False	NA	16	True	AGTAAA	-17	NA	20694518	20995953	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_20694565_20715321_20715411_20717793_20717869_20720379_20720535_20740235_20740341_20758089_20758192_20764868_20765074_20770031_20770239_20778680_20778769_20781726_20781930_20789350_20789609_20862577_20862713_20865925_20865977_20866928_20867013_20874680_20874808_20881870_20882057_20885108_20885231_20907149_20907243_20912865_20912955_20916892_20916938_20923659_20923769_20926300_20926418_20929357_20929597_20933013_20933104_20944626_20944775_20946700_20946821_20948270_20948394_20948850_20948929_20949603_20949676_20950995_20951099_20952984_20953066_20976419_20976549_20978338_20978455_20981425_20981687_20982356_20982447_20986287_20986466_20988331_20988430_20990122_20990375_20993252_20993329_20995555
H1_mix_00088471	chr9	+	1731	1	FSM	ENSG00000207609.3	ENST00000384877.3	84	1	-500	-1147	-500	1147	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAATGGCAATGATTGTT	5352	False	NA	NA	False	NA	NA	NA	20715604	20717335	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_20715600_20717300
H1_mix_00088472	chr9	+	2468	1	FSM	ENSG00000229835.2	ENST00000427983.2	1768	1	-1099	399	-1099	-399	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGGCCGCCTACTACTC	NA	False	NA	NA	False	NA	NA	NA	21694076	21696544	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_21694100_21696500
H1_mix_00088473	chr9	+	382	1	FSM	ENSG00000215221.2	ENST00000399822.2	382	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTCTTCCTTCCTCGGA	35	False	NA	NA	False	NA	NA	NA	22012154	22012536	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_22012200_22012500
H1_mix_00088474	chr9	+	279	1	FSM	ENSG00000236739.3	ENST00000453177.2	535	1	1	255	1	-255	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAGTTTTCTAAACGTAA	NA	False	NA	NA	False	NA	NA	NA	22747700	22747979	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_22747700_22748000
H1_mix_00088476	chr9	+	4067	3	Intergenic	novelGene_1540	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_2	0.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTGAATATTTATTTGAA	NA	False	NA	13	True	AATAAA	-21	NA	25288482	25303493	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_25288740_25290058_25290218_25299842
H1_mix_00088477	chr9	+	287	2	FSM	ENSG00000253400.1	ENST00000521572.1	371	2	84	0	84	0	multi-exon	FALSE	canonical	2	4	junction_1	0	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAAGTCACTGATGGCAT	4252	False	NA	NA	False	NA	NA	NA	26801816	26805862	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_26802061_26805819
H1_mix_00088478	chr9	+	4704	24	NNC	ENSG00000120156.22	novel	4683	23	NA	NA	0	23654	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	28.7914737431493	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGCAGGGATT	-1	True	NA	NA	False	NA	NA	NA	27109224	27253828	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_27109643_27157830_27158143_27168494_27168606_27169476_27169630_27172615_27172748_27173221_27173363_27180239_27180369_27183458_27183611_27185484_27185630_27190528_27190691_27192488_27192624_27197314_27197600_27202819_27203120_27204910_27205063_27206581_27206793_27209120_27209232_27212706_27212898_27213483_27213598_27217687_27217759_27218776_27218818_27220048_27220146_27228205_27228306_27229157_27230172_27253801
H1_mix_00088480	chr9	+	442	1	FSM	ENSG00000235453.12	ENST00000644531.1	668	1	-61	287	-43	-282	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCAACGGTAACCTGACGG	570	False	NA	NA	False	NA	NA	NA	32552283	32552725	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_32552300_32552700
H1_mix_00088481	chr9	+	384	4	FSM	ENSG00000122711.9	ENST00000379721.4	399	4	11	4	11	-4	multi-exon	FALSE	canonical	2	3	junction_3	0.816496580927726	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTGAAGTGGTCAGTGT	10	False	NA	3	True	AATAAA	-14	NA	33240177	33248563	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_33240270_33245111_33245153_33246615_33246729_33248425
H1_mix_00088482	chr9	+	1133	2	FSM	ENSG00000086065.14	ENST00000487080.1	576	2	2	-559	2	-559	multi-exon	FALSE	canonical	3	699	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATATAATTTTAATAATAT	NA	False	NA	13	True	AATAAA	-13	NA	33277794	33281510	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_33278226_33280808
H1_mix_00088483	chr9	+	987	3	FSM	ENSG00000086102.19	ENST00000463421.1	987	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	17.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCACCACCGATTCCTCA	NA	False	NA	NA	False	NA	NA	NA	33365232	33367578	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_33366010_33366628_33366775_33367514
H1_mix_00088484	chr9	+	353	4	FSM	ENSG00000230453.10	ENST00000474881.6	420	4	0	67	0	-67	multi-exon	FALSE	canonical	2	7	junction_3	1.69967317119759	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTTCAAAAGGTAGGACAC	7189	False	NA	NA	False	AATGAA	-21	NA	33533441	33539491	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_33533546_33534369_33534508_33536877_33536946_33539448
H1_mix_00088486	chr9	+	919	5	FSM	ENSG00000213930.12	ENST00000465543.6	903	5	-16	0	0	0	multi-exon	FALSE	canonical	3	166	junction_4	9.09326673973661	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGGTGTCAGGGGCTCC	12	True	NA	NA	False	AAAACA	-45	NA	34646651	34648171	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_34647259_34647491_34647568_34647656_34647706_34647831_34647962_34648114
H1_mix_00088488	chr9	+	864	1	FSM	ENSG00000178723.7	ENST00000324731.7	1122	1	-98	356	-98	-356	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCACCAAGGCCATGTGG	31	False	NA	NA	False	NA	NA	NA	34917076	34917940	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_34917100_34917900
H1_mix_00088489	chr9	+	2586	3	FSM	ENSG00000137094.16	ENST00000541010.5	5228	3	2642	0	-8	0	multi-exon	FALSE	canonical	3	188	junction_2	8.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCATCTGAGCAGGAGCAA	6	True	NA	20	True	AATAAA	-15	NA	34992863	34998428	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_34993445_34996264_34996867_34997025
H1_mix_00088490	chr9	+	874	5	NNC	ENSG00000159884.12	novel	1264	5	NA	NA	1	-5	intron_retention	FALSE	canonical	2	12	junction_4	74.5888731648361	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGTTTTCATGATGGAG	-3	True	NA	0	True	ACTAAA	-5	NA	35658317	35661172	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_35658486_35658575_35658728_35660400_35660462_35660556_35660648_35660770
H1_mix_00088491	chr9	+	697	7	FSM	ENSG00000107159.14	ENST00000493245.1	697	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.7938424357067	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATATTTATAATAAA	2140	False	NA	NA	False	AAGAAA	-8	NA	35676162	35681138	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_35676207_35677789_35677857_35679184_35679343_35679853_35679999_35680112_35680140_35680752_35680835_35680964
H1_mix_00088492	chr9	+	2165	11	FSM	ENSG00000137103.20	ENST00000439587.6	2150	11	-15	0	-15	0	multi-exon	FALSE	canonical	1	2	junction_1	23.3762700189744	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTCCACACTCTGTCCA	-49	True	NA	19	True	AATAAA	-18	NA	35829212	35847235	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_35829392_35829876_35829956_35834460_35834651_35835010_35835219_35841133_35841268_35841525_35841795_35842391_35842718_35845974_35846069_35846257_35846382_35846468_35846612_35846816
H1_mix_00088493	chr9	+	2104	15	ISM	ENSG00000122707.12	ENST00000377966.4	4412	21	0	14246	0	-14246	5prime_fragment	TRUE	canonical	3	62	junction_13	77.6596775051512	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTTTTCCTCCCTGGAT	-24	True	NA	16	True	AATAAA	-24	NA	36036912	36110209	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_36037099_36052264_36052324_36058826_36058902_36060118_36060156_36063794_36063881_36065576_36065625_36080604_36080639_36083364_36083563_36087693_36087962_36091163_36091344_36100330_36100544_36102093_36102231_36105142_36105284_36107975_36108165_36109956
H1_mix_00088494	chr9	+	4417	22	NIC	ENSG00000122707.12	novel	4412	21	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	77.3677790984747	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCATGCTTCTAAGCAAT	3	True	NA	13	True	AATAAA	-18	NA	36036939	36124453	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_36037099_36052264_36052324_36056979_36057014_36058826_36058902_36060118_36060156_36063794_36063881_36065576_36065625_36080604_36080639_36083364_36083563_36087693_36087962_36091163_36091344_36100330_36100544_36102093_36102231_36105142_36105284_36107975_36108165_36109956_36110080_36112304_36112477_36116984_36117178_36118756_36118968_36120662_36120737_36121532_36121689_36122823
H1_mix_00088495	chr9	+	351	1	FSM	ENSG00000185972.6	ENST00000335119.4	1947	1	771	825	771	-825	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCAGATTTCAGGGCTGA	742	False	NA	NA	False	NA	NA	NA	36170158	36170509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_36170200_36170500
H1_mix_00088496	chr9	+	1089	6	FSM	ENSG00000122705.17	ENST00000396603.6	1090	6	0	1	0	0	multi-exon	FALSE	canonical	1	2	junction_5	758.057148241477	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATGTGAAGCTTCTTTAT	24	True	NA	29	True	AATAAA	-18	NA	36190962	36212058	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_36191274_36197550_36197589_36198978_36199097_36204067_36204180_36209266_36209321_36211602
H1_mix_00088497	chr9	+	2226	16	NIC	ENSG00000165304.8	novel	2342	17	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_11	134.15056218046	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGGCTTCTCTTTTTTGT	NA	False	NA	-53	True	AATAAA	-16	NA	36572852	36677681	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_36573008_36581643_36581740_36583626_36583713_36589535_36589653_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
H1_mix_00088498	chr9	+	2265	16	NIC	ENSG00000165304.8	novel	2400	17	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_3	118.827531415166	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTCTCTTTTTTGTAT	NA	False	NA	-51	True	AATAAA	-18	NA	36572852	36677683	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_36573008_36581643_36581740_36589535_36589653_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
H1_mix_00088499	chr9	+	2292	16	FSM	ENSG00000165304.8	ENST00000536329.5	2283	16	-9	0	-9	0	multi-exon	FALSE	canonical	2	11	junction_2	111.491624000291	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTCTCTTTTTTGTAT	NA	False	NA	-51	True	AATAAA	-18	NA	36572852	36677683	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_36573008_36581643_36581740_36594627_36594772_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
H1_mix_00088500	chr9	+	2558	17	NIC	ENSG00000165304.8	novel	2400	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	115.635860976386	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTCTCTTTTTTGTAT	0	True	NA	-51	True	AATAAA	-18	NA	36572894	36677683	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_36573199_36581643_36581740_36589535_36589653_36594627_36594772_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
H1_mix_00088501	chr9	+	2835	1	FSM	ENSG00000281649.3	ENST00000628924.1	2835	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGATTTGG	4985	False	NA	NA	False	NA	NA	NA	37084989	37087824	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_37085000_37087800
H1_mix_00088502	chr9	+	1725	9	FSM	ENSG00000137106.18	ENST00000607784.1	1704	9	-21	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	188.964116964042	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTCAGCAACCAAAAACCAT	22	True	NA	NA	False	NA	NA	NA	37422724	37434879	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_37422834_37424844_37424976_37425921_37425995_37426537_37426655_37428483_37428573_37429731_37429837_37430510_37430647_37432007_37432139_37434045
H1_mix_00088504	chr9	+	3178	3	FSM	ENSG00000137124.8	ENST00000635162.1	584	3	-71	-2523	-61	0	multi-exon	FALSE	canonical	3	10	junction_2	6	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTTGTCTCCATATTG	NA	False	NA	22	True	AATAAA	-22	NA	38392640	38398661	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_38392808_38394476_38394566_38395739
H1_mix_00088505	chr9	+	358	1	FSM	ENSG00000215165.3	ENST00000443005.1	880	1	439	83	439	-83	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTACAAGCCTGCAGTGTT	NA	False	NA	NA	False	AAAAAG	-17	NA	38478909	38479267	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_38478900_38479300
H1_mix_00088506	chr9	+	727	1	FSM	ENSG00000237557.1	ENST00000445359.1	727	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCTGCCATGCCTCA	NA	False	NA	NA	False	NA	NA	NA	38643041	38643768	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_38643000_38643800
H1_mix_00088508	chr9	+	1354	6	NNC	ENSG00000276291.6	novel	2139	9	NA	NA	-2	-1065	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	18.810635289644	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTGCTTACTGTTTTCA	2	True	NA	8	True	AATAAA	-35	NA	40992257	41014139	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_40992776_40994632_40994700_41007439_41007610_41008880_41009007_41011616_41011731_41013780
H1_mix_00088509	chr9	+	1229	1	FSM	ENSG00000279456.1	ENST00000624467.1	1628	1	524	-125	524	125	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTCCAGCCTGGATGAC	NA	False	NA	NA	False	NA	NA	NA	41061813	41063042	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_41061800_41063000
H1_mix_00088510	chr9	+	428	1	FSM	ENSG00000275160.1	ENST00000619764.1	589	1	-15	176	-15	-176	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACGCTGTCACCACCTTA	NA	False	NA	NA	False	NA	NA	NA	41479944	41480372	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_41479900_41480400
H1_mix_00088511	chr9	+	873	1	FSM	ENSG00000275297.1	ENST00000612900.1	1407	1	-53	587	-50	-587	mono-exon	FALSE	NA	NA	NA	NA	NA	262	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTGCTTATGTATTGTG	NA	False	NA	NA	False	AAAACA	-25	NA	41760037	41760910	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_41760000_41760900
H1_mix_00088512	chr9	+	1332	1	FSM	ENSG00000268234.1	ENST00000457486.2	1332	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCTCTCACCAGCCCTACT	NA	False	NA	NA	False	NA	NA	NA	42384804	42386136	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_42384800_42386100
H1_mix_00088513	chr9	+	247	2	Intergenic	novelGene_1553	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCGACAGACCGAGACTCC	NA	False	NA	NA	False	NA	NA	NA	42452963	42454992	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_42453022_42454803
H1_mix_00088514	chr9	+	418	2	FSM	ENSG00000231527.7	ENST00000656580.1	1324	2	436	470	3	-470	multi-exon	FALSE	canonical	2	9	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAGTAGATGCCAAGT	2336	False	NA	NA	False	NA	NA	NA	61856536	61917607	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_61856815_61917467
H1_mix_00088515	chr9	+	371	1	FSM	ENSG00000284471.1	ENST00000638516.1	4139	1	176	3592	176	-3592	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTCCCTGAGGACATCGA	NA	False	NA	NA	False	NA	NA	NA	61982971	61983342	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_61983000_61983300
H1_mix_00088516	chr9	+	1311	3	FSM	ENSG00000226007.3	ENST00000450704.1	1549	3	-4	242	-4	-240	multi-exon	FALSE	canonical	1	2	junction_2	6	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAGCAATTTCATATAGT	NA	False	NA	NA	False	AATACA	-6	NA	62532332	62534482	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_62532689_62532802_62532933_62533657
H1_mix_00088517	chr9	+	672	2	NNC	ENSG00000170161.7	novel	1604	2	NA	NA	228	3870	intron_retention	FALSE	canonical	3	27	junction_1	0	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTATCATCTGTTCCAG	NA	False	NA	NA	False	AATAAA	-20	NA	62897676	62903974	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_62897980_62903605
H1_mix_00088518	chr9	+	263	1	FSM	ENSG00000266017.1	ENST00000581659.1	81	1	-242	60	-242	-60	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCCTTAATAGCAATCCT	1552	False	NA	NA	False	NA	NA	NA	63819331	63819594	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_63819300_63819600
H1_mix_00088519	chr9	+	3112	1	FSM	ENSG00000229156.1	ENST00000445057.1	378	1	-172	-2562	-172	2562	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGCTTCTCCGGGATCTT	NA	False	NA	NA	False	NA	NA	NA	64462646	64465758	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_64462600_64465800
H1_mix_00088520	chr9	+	906	4	FSM	ENSG00000147996.17	ENST00000377380.5	894	4	-12	0	5	0	multi-exon	FALSE	canonical	1	4	junction_1	435.343797730279	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAACCTTACATTATGT	NA	False	NA	NA	False	AATAAA	-14	NA	65675862	65682026	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_65676131_65677127_65677226_65679165_65679253_65681573
H1_mix_00088521	chr9	+	1354	15	NIC	ENSG00000147996.17	novel	1411	16	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	66	junction_10	549.261382518861	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTATATTTCAAGCATTT	4	False	NA	-3	True	AATAAA	-14	NA	65675893	65733668	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65693385_65693474_65698514_65698562_65700250_65700338_65702969_65703015_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
H1_mix_00088522	chr9	+	342	1	FSM	ENSG00000275493.2	ENST00000612308.2	342	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACACACACACACAGAGACA	NA	False	NA	NA	False	NA	NA	NA	67725913	67726255	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_67725900_67726300
H1_mix_00088523	chr9	+	1587	13	FSM	ENSG00000196873.16	ENST00000618217.4	1611	13	24	0	0	0	multi-exon	FALSE	canonical	3	43	junction_8	421.718606814228	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGATGTTGATGTTGACGA	NA	False	NA	NA	False	AATAAA	-15	NA	68241912	68300011	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_68242186_68245212_68245300_68247612_68247710_68248805_68248898_68256920_68256981_68258531_68258570_68264467_68264515_68268933_68268979_68285988_68286041_68297579_68297649_68297751_68297818_68298963_68299094_68299480
H1_mix_00088524	chr9	+	1678	14	FSM	ENSG00000196873.16	ENST00000377342.9	1665	14	-13	0	0	0	multi-exon	FALSE	canonical	3	43	junction_9	391.79917268414	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGATGTTGACGACCTG	NA	False	NA	NA	False	AATAAA	-19	NA	68241912	68300015	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_68242186_68245212_68245300_68247612_68247710_68248805_68248898_68256920_68256981_68258531_68258570_68264467_68264515_68266219_68266307_68268933_68268979_68285988_68286041_68297579_68297649_68297751_68297818_68298963_68299094_68299480
H1_mix_00088527	chr9	+	1326	16	NNC	ENSG00000196873.16	novel	1685	15	NA	NA	0	1611	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	391.12364626377	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGAGCCAGAGCCAGGCA	-1	True	NA	NA	False	AAAAAG	-3	NA	68241982	68301646	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_68242186_68245212_68245300_68247612_68247710_68248805_68248898_68256920_68256981_68258531_68258570_68264467_68264515_68266219_68266307_68268933_68268979_68274881_68274939_68285988_68286041_68297579_68297649_68297751_68297818_68298963_68299094_68299480_68299644_68301613
H1_mix_00088528	chr9	+	3354	11	FSM	ENSG00000154330.13	ENST00000396396.6	3626	11	272	0	-16	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAAGGATTGTGGGTTTTT	118	False	NA	NA	False	AATAAA	-26	NA	68356882	68531061	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_68357389_68378198_68378362_68384397_68384545_68387462_68387589_68391533_68391725_68392318_68392474_68465092_68465209_68479417_68479554_68483864_68484049_68499226_68499362_68529566
H1_mix_00088529	chr9	+	3388	23	NIC	ENSG00000119139.21	novel	5085	19	NA	NA	10	-285	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	103.096290143352	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTCCAGACCTTATCAGG	-19	True	NA	NA	False	NA	NA	NA	69121273	69254235	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_69121366_69121483_69121726_69151650_69151772_69212547_69212602_69216338_69216464_69218256_69218360_69220886_69221497_69225303_69225408_69226021_69226176_69227764_69227874_69227980_69228115_69229183_69229251_69230081_69230233_69234438_69234548_69236027_69236239_69236948_69237137_69237877_69237974_69238709_69238790_69239936_69240148_69246689_69246791_69248011_69248225_69252814_69252901_69254208
H1_mix_00088530	chr9	+	4744	23	NIC	ENSG00000119139.21	novel	5085	19	NA	NA	14	0	intron_retention	FALSE	canonical	0	0	junction_1	75.4473298850056	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTCTTTGTGGTGGAT	29	True	NA	7	True	AATAAA	-21	NA	69121321	69255201	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_69121726_69212547_69212602_69216338_69216464_69218256_69218360_69220886_69221497_69225303_69225408_69226021_69226176_69227764_69227874_69227980_69228115_69229183_69229251_69230081_69230233_69234438_69234548_69236027_69236239_69236948_69237137_69237877_69237974_69238709_69238790_69239936_69240148_69246689_69246791_69248011_69248225_69249374_69249486_69251034_69251365_69252814_69252901_69254208
H1_mix_00088532	chr9	+	3374	6	FSM	ENSG00000119139.21	ENST00000649927.1	3374	6	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_4	21.0466149297221	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAATACATTGCAATCC	NA	False	NA	-14	True	NA	NA	NA	69240036	69255180	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_69240148_69246689_69246791_69248011_69248225_69249374_69249486_69251034_69252901_69254208
H1_mix_00088533	chr9	+	3861	16	NIC	ENSG00000148019.14	novel	3159	17	NA	NA	1	487	combination_of_known_junctions	FALSE	canonical	3	32	junction_8	64.3385490113733	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGATATGAGACAAACTACT	0	True	NA	3	True	AATAAA	-19	NA	78236081	78272370	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_78236604_78240022_78240196_78240291_78240365_78241695_78241800_78243461_78243637_78246668_78246783_78248290_78248356_78248761_78248874_78251904_78252044_78253231_78253278_78254835_78254965_78262906_78262985_78264149_78264317_78265371_78265544_78266441_78266704_78270840
H1_mix_00088534	chr9	+	2797	21	FSM	ENSG00000106829.20	ENST00000376537.8	2793	21	-4	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	48.1730993397768	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCAGCTGTCTACTTGGA	3	True	NA	NA	False	ATTAAA	-17	NA	79572610	79725343	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_79572836_79573688_79573787_79574872_79574937_79576132_79576178_79612655_79612719_79627373_79627449_79652592_79652795_79654058_79654076_79704782_79704903_79705888_79705943_79706746_79706900_79707122_79707219_79708117_79708251_79708592_79708787_79709622_79709700_79718721_79718972_79720045_79720294_79721740_79721889_79722450_79722602_79722958_79723036_79725036
H1_mix_00088537	chr9	+	447	2	NNC	ENSG00000228430.9	novel	1301	10	NA	NA	258745	2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTTGTTTTTTGATTT	NA	False	NA	4	True	AATAAA	-19	NA	82750696	82780196	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_82750826_82779878
H1_mix_00088538	chr9	+	392	1	FSM	ENSG00000231007.5	ENST00000488829.1	1500	1	89	1019	89	-1019	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCCGGAAGACCTACCAT	154	False	NA	NA	False	NA	NA	NA	87011740	87012132	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_87011700_87012100
H1_mix_00088539	chr9	+	1488	1	FSM	ENSG00000228373.2	ENST00000454946.2	260	1	-1060	-168	-1060	168	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGGCTTACACCAATAAT	NA	False	NA	11	True	AATAAA	-22	NA	87422573	87424061	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_87422600_87424100
H1_mix_00088540	chr9	+	1967	7	FSM	ENSG00000135047.16	ENST00000678596.1	1963	7	-4	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	81.5511087192157	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTGCATTTTCGTTTT	47	False	NA	-51	True	TATAAA	-27	NA	87726165	87731320	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_87726399_87727593_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380
H1_mix_00088541	chr9	+	1142	1	FSM	ENSG00000217716.3	ENST00000439253.1	494	1	-591	-57	-591	57	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAACAAACAAACAAACAAA	NA	False	NA	NA	False	AATAAA	-24	NA	88015708	88016850	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_88015700_88016800
H1_mix_00088542	chr9	+	5002	9	FSM	ENSG00000106723.17	ENST00000469017.6	2082	9	-140	-2780	-139	0	multi-exon	FALSE	canonical	0	0	junction_3	367.472107785067	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTGACTGTAAAGTTTGT	349	False	NA	28	True	AATAAA	-15	NA	88388290	88478694	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_88388539_88415606_88415700_88416643_88416767_88418777_88418952_88426381_88426592_88448940_88448990_88462495_88462750_88468371_88468606_88475077
H1_mix_00088543	chr9	+	3329	17	NNC	ENSG00000187742.15	novel	3320	17	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	96.8629831256502	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTCAGACTCTGGTG	-5	True	NA	16	True	AATAAA	-15	NA	89318512	89359642	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_89318613_89319651_89319798_89325430_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334635_89334731_89338457_89338581_89339863_89339954_89341346_89341480_89346881_89347049_89348078_89348215_89349775_89349930_89350631_89350853_89357410_89357566_89357998_89358192_89358720
H1_mix_00088545	chr9	+	1192	1	FSM	ENSG00000231799.2	ENST00000438325.2	1197	1	-123	128	-123	-128	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTCCAGAGTTCTGCAAG	8578	False	NA	NA	False	NA	NA	NA	89449434	89450626	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_89449400_89450600
H1_mix_00088546	chr9	+	836	2	FSM	ENSG00000237372.4	ENST00000444374.1	822	2	-14	0	-14	0	multi-exon	FALSE	canonical	2	12	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGAGCGGAGGCAAGCTG	3	True	NA	NA	False	NA	NA	NA	89701636	89719670	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_89701989_89719186
H1_mix_00088547	chr9	+	3666	3	Antisense	novelGene_ENSG00000231107.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_2	5	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTACCAATCCAGTTGCA	NA	False	NA	0	True	AATAAA	-19	NA	90413086	90429446	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr9_+_90415122_90427768_90428028_90428074
H1_mix_00088548	chr9	+	213	1	FSM	ENSG00000225511.7	ENST00000643592.1	213	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTACTGCCCGCCTGTC	62	False	NA	NA	False	NA	NA	NA	92141437	92141650	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_92141400_92141600
H1_mix_00088549	chr9	+	491	3	FSM	ENSG00000165233.18	ENST00000495641.5	926	3	-58	493	-47	0	multi-exon	FALSE	canonical	3	97	junction_2	86.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTTCCACATCACCAAC	0	True	NA	NA	False	NA	NA	NA	93096169	93110721	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_93096353_93107673_93107828_93110567
H1_mix_00088550	chr9	+	506	4	FSM	ENSG00000165233.18	ENST00000466929.5	506	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	125.865007051205	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTTCCACATCACCAAC	12	True	NA	NA	False	NA	NA	NA	93096256	93110721	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_93096353_93107673_93107828_93108990_93109093_93110567
H1_mix_00088551	chr9	+	6879	26	NIC	ENSG00000165238.17	novel	7080	30	NA	NA	25	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_12	9.60549842538116	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGGGCTGGAGTTTTGTT	-10	True	NA	17	True	AGTAAA	-17	NA	93184163	93309195	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_93184386_93184927_93185611_93229695_93229869_93230887_93231109_93234807_93234966_93238232_93238322_93239756_93239977_93247542_93247835_93252882_93253083_93256298_93256455_93256947_93257140_93258930_93259615_93261813_93262108_93262669_93262720_93263565_93263735_93263916_93264034_93267745_93267917_93268019_93268066_93268626_93268747_93288787_93289621_93289977_93290048_93292307_93292397_93292490_93293174_93297852_93298068_93308327_93308585_93308720
H1_mix_00088552	chr9	+	6909	28	NIC	ENSG00000165238.17	novel	7080	30	NA	NA	25	1	combination_of_known_junctions	FALSE	canonical	3	24	junction_21	13.2678432797092	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTGGTTTTTCAAACTA	-10	True	NA	18	True	AATAAA	-21	NA	93184163	93320570	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_93184386_93184927_93185611_93229695_93229869_93230887_93231109_93234807_93234966_93238232_93238322_93239756_93239977_93247542_93247835_93252882_93253083_93256298_93256455_93256947_93257140_93258930_93259615_93261813_93262108_93262669_93262720_93263565_93263735_93263916_93264034_93267745_93267917_93268019_93268066_93268626_93268747_93288787_93289621_93289977_93290048_93292310_93292397_93292490_93293174_93297852_93298068_93299069_93299262_93308327_93308585_93317519_93317632_93320366
H1_mix_00088553	chr9	+	1917	7	NNC	ENSG00000165238.17	novel	1937	7	NA	NA	270	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	23.9629343408152	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGGGCTGGAGTTTTGTT	NA	False	NA	17	True	AGTAAA	-17	NA	93289456	93309195	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_93289621_93289977_93290048_93292310_93292397_93292490_93293174_93297852_93298068_93308327_93308552_93308720
H1_mix_00088555	chr9	+	4332	11	FSM	ENSG00000158079.16	ENST00000650567.1	4332	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12.1181681784006	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGCAACCCATAATCCTAG	165	False	NA	-4	True	AATAAA	-8	NA	94031026	94109842	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_94031128_94057117_94057180_94064733_94064822_94085250_94085423_94087830_94087912_94088144_94088264_94095316_94095455_94097320_94098580_94101565_94101752_94104274_94104386_94107827
H1_mix_00088556	chr9	+	478	6	FSM	ENSG00000148120.18	ENST00000471978.5	478	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	19.5918350340135	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCTCGAACTGACCCTGG	0	True	NA	NA	False	NA	NA	NA	95004979	95086731	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_95005066_95005157_95005221_95005541_95005617_95060693_95060811_95080693_95080781_95086681
H1_mix_00088557	chr9	+	348	1	FSM	ENSG00000223849.1	ENST00000433735.1	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTTGAGTCCTTAAAGTC	NA	False	NA	NA	False	NA	NA	NA	95123520	95123868	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_95123500_95123900
H1_mix_00088558	chr9	+	2383	1	FSM	ENSG00000230221.2	ENST00000445995.2	2473	1	115	-25	115	25	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGGCATCTACCATTTCCT	NA	False	NA	NA	False	NA	NA	NA	95292452	95294835	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_95292500_95294800
H1_mix_00088559	chr9	+	283	1	FSM	ENSG00000271314.1	ENST00000605700.1	456	1	-24	197	-24	-197	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCCTGGTGCCGTGAGGA	208	False	NA	NA	False	NA	NA	NA	95494899	95495182	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_95494900_95495200
H1_mix_00088560	chr9	+	476	1	FSM	ENSG00000271659.1	ENST00000604650.1	476	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGTCTTTCTTTCATA	4596	False	NA	NA	False	AGTAAA	-15	NA	95514044	95514520	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_95514000_95514500
H1_mix_00088562	chr9	+	6153	20	NIC	ENSG00000182150.19	novel	5114	21	NA	NA	-106	92	combination_of_known_junctions	FALSE	canonical	1	2	junction_16	20.8281452450532	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCACAACCCACTGAATTG	9	True	NA	95	True	NA	NA	NA	95876036	96014649	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_95876085_95880868_95881294_95897848_95897972_95907077_95907272_95915667_95915830_95916226_95916435_95921174_95921316_95922304_95922419_95923259_95923380_95928078_95928151_95928718_95928865_95941453_95941550_95955913_95956014_95966561_95966715_95970575_95970657_95971543_95971596_95971932_95973089_95978060_95978216_96004519_96004702_96012224
H1_mix_00088563	chr9	+	740	1	FSM	ENSG00000233820.2	ENST00000602289.1	740	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAAATCAGGTGA	NA	False	NA	NA	False	AAAACA	-34	NA	96726729	96727469	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_96726700_96727500
H1_mix_00088564	chr9	+	1753	1	FSM	ENSG00000213612.3	ENST00000395253.3	831	1	-757	-165	-757	165	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACATACGGATTTACGAT	NA	False	NA	NA	False	TATAAA	-10	NA	97120901	97122654	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_97120900_97122700
H1_mix_00088565	chr9	+	2987	2	Genic_Genomic	ENSG00000289356.1	novel	96	1	NA	NA	-16	5078	multi-exon	FALSE	canonical	3	637	junction_1	0	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCATGAAATTATCTTTTGT	3	True	NA	57	True	NA	NA	NA	97214817	97220007	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_+_97217381_97219583
H1_mix_00088566	chr9	+	1595	4	Genic_Genomic	ENSG00000289356.1	novel	96	1	NA	NA	-16	5078	multi-exon	FALSE	canonical	0	0	junction_2	674.144560824226	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCATGAAATTATCTTTTGT	3	True	NA	57	True	NA	NA	NA	97214817	97220007	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_+_97215114_97216273_97216492_97216706_97217364_97219583
H1_mix_00088567	chr9	+	4310	15	NIC	ENSG00000254876.5	novel	3161	16	NA	NA	0	1235	combination_of_known_splicesites	FALSE	canonical	1	3	junction_14	16.4217377091389	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATGTTTCATTTAGAGT	-18	True	NA	17	True	AATAAA	-18	NA	97238448	97298549	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_97238568_97246095_97246187_97250791_97250844_97251540_97251558_97276568_97276698_97277555_97277627_97279361_97279474_97281515_97281670_97287659_97287736_97290583_97290666_97290853_97290903_97291370_97291488_97293946_97294111_97294844_97294992_97295619
H1_mix_00088568	chr9	+	2189	18	NIC	ENSG00000197816.16	novel	7060	37	NA	NA	-5467	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_1	9.31197093896701	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTCCCTGTCCATCTAC	NA	False	NA	13	True	AATAAA	-17	NA	97349149	97376933	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_97349292_97350408_97350556_97354568_97354714_97354891_97355009_97357626_97357726_97359981_97360102_97361725_97361899_97362195_97362252_97362362_97362442_97364050_97364129_97365672_97365740_97366558_97366701_97369921_97370083_97370640_97370779_97371594_97371707_97374542_97374649_97375453_97375590_97376762
H1_mix_00088571	chr9	+	1536	1	FSM	ENSG00000260677.1	ENST00000562653.1	1728	1	-330	522	-330	-522	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCTCAGGTAGTATCG	NA	False	NA	NA	False	ATTAAA	-21	NA	97742877	97744413	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_97742900_97744400
H1_mix_00088572	chr9	+	2124	1	FSM	ENSG00000178919.9	ENST00000375123.5	3492	1	1398	-30	1398	30	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACATATCAAAAATATTATG	182	False	NA	NA	False	AGTAAA	-41	NA	97854623	97856747	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_97854600_97856700
H1_mix_00088574	chr9	+	646	2	Antisense	novelGene_ENSG00000255145.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	794	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCCGCCCTTCTCCCCAA	9549	False	NA	NA	False	ACTAAA	-43	NA	99670167	99672982	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr9_+_99670380_99672548
H1_mix_00088575	chr9	+	7258	8	NIC	ENSG00000136874.11	novel	6885	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	25.7317401078822	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTAACTGAAGGCCTGTG	7	True	NA	18	True	AATAAA	-18	NA	99906672	99974534	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_99907099_99915177_99915363_99928777_99928844_99951059_99951286_99959916_99960033_99960104_99960156_99967652_99967740_99968433
H1_mix_00088578	chr9	+	3578	18	NIC	ENSG00000119509.13	novel	2968	18	NA	NA	-8	-10	intron_retention	TRUE	canonical	0	0	junction_3	12.6775282757875	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGAAGGCTGATTCACC	-19	True	NA	-39	True	NA	NA	NA	100099252	100300778	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_100099417_100104497_100104628_100126382_100126550_100215400_100215489_100226061_100226236_100229659_100229828_100240059_100240241_100242569_100242680_100246615_100246788_100252282_100252439_100252906_100253137_100264821_100264929_100272863_100273077_100284319_100284604_100292325_100293044_100296916_100297147_100297935_100298011_100300567
H1_mix_00088579	chr9	+	239	1	FSM	ENSG00000239908.3	ENST00000461926.3	281	1	18	24	18	-24	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAACATAGCAAGATCCCAT	3305	False	NA	NA	False	NA	NA	NA	100102576	100102815	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_100102600_100102800
H1_mix_00088580	chr9	+	780	3	FSM	ENSG00000066697.15	ENST00000398977.2	780	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	9.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTCAGCCCAAGGTATC	7	True	NA	NA	False	NA	NA	NA	100427206	100442341	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_100427394_100429505_100429663_100441905
H1_mix_00088582	chr9	+	735	6	FSM	ENSG00000165028.12	ENST00000461177.1	735	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	1.49666295470958	497	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTTCTCGCTTTTATTT	15	True	NA	NA	False	NA	NA	NA	104764194	104773146	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_104764301_104768862_104769022_104770848_104770999_104771233_104771317_104772821_104772909_104772996
H1_mix_00088583	chr9	+	9640	16	FSM	ENSG00000070214.16	ENST00000374723.5	9640	16	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_15	145.654141337927	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTATTGTCTACTGTGTTG	-9	True	NA	9	True	AATAAA	-21	NA	105244621	105397346	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_105244905_105299219_105299310_105309723_105309867_105335562_105335700_105348357_105348452_105356211_105356382_105358343_105358434_105361190_105361331_105362820_105363008_105364554_105364721_105365482_105365640_105366345_105366430_105374597_105374736_105383122_105383360_105385421_105385503_105389903
H1_mix_00088584	chr9	+	6649	4	ISM	ENSG00000106701.13	ENST00000374707.1	7062	8	33701	2	33701	-2	3prime_fragment	FALSE	canonical	3	10	junction_2	1.63299316185545	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCCTGCTCTCTTTTGCT	NA	False	NA	3	True	ATTAAA	-14	NA	105534359	105552431	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_105534594_105535066_105535319_105539262_105539352_105546357
H1_mix_00088585	chr9	+	7544	11	NIC	ENSG00000106692.15	novel	7897	14	NA	NA	-2879	0	intron_retention	FALSE	canonical	2	3	junction_1	15.3391655574871	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATCTTGTATTTATTTTT	NA	False	NA	4	True	AATAAA	-19	NA	105570773	105641118	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_105570898_105573654_105573747_105574944_105575138_105596597_105596658_105601144_105601349_105604214_105604493_105607818_105607952_105615277_105615408_105617958_105618093_105619933_105620062_105635050
H1_mix_00088586	chr9	+	786	6	FSM	ENSG00000106692.15	ENST00000374705.5	786	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	24.6056903987675	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAGGTTAGAGACAACCAA	NA	False	NA	NA	False	TATAAA	-17	NA	105575119	105607946	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_105575138_105596597_105596658_105598085_105598184_105601144_105601349_105604214_105604493_105607818
H1_mix_00088587	chr9	+	659	2	Genic_Genomic	ENSG00000186051.7	novel	668	1	NA	NA	-6214	-49	multi-exon	FALSE	canonical	3	37	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACTTTTGGAGAAAAAAT	-17	True	NA	NA	False	TTTAAA	-15	NA	105656242	105663075	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_+_105656313_105662486
H1_mix_00088589	chr9	+	4735	10	FSM	ENSG00000157654.19	ENST00000302798.7	4718	10	-17	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	18.1107702762748	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAATTTCTTTTTTATGA	111	False	NA	NA	False	NA	NA	NA	109780438	110169909	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_109780534_109867490_109867572_109880550_109880682_109923734_109923850_109925060_109925083_109931926_109932029_110015953_110016040_110136126_110138540_110156318_110156498_110168398
H1_mix_00088590	chr9	+	3114	4	FSM	ENSG00000157654.19	ENST00000259318.7	3101	4	-13	0	-13	0	multi-exon	FALSE	canonical	2	8	junction_1	24.7161665492222	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCGGAACTGAGACCAGCCT	8640	False	NA	NA	False	AAAACA	-31	NA	110125487	110168811	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_110125597_110136126_110138540_110156318_110156498_110168398
H1_mix_00088592	chr9	+	1317	4	ISM	ENSG00000173258.13	ENST00000355824.7	1239	6	49	5360	22	-5360	intron_retention	FALSE	canonical	3	24	junction_2	7.76029781788188	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTTGAGAAGACTCTTT	44	False	NA	NA	False	ATTAAA	-16	NA	111525237	111534401	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_111525263_111527267_111527808_111530874_111530964_111533738
H1_mix_00088593	chr9	+	685	3	NIC	ENSG00000242616.4	novel	1201	3	NA	NA	0	-513	combination_of_known_splicesites	FALSE	canonical	3	202	junction_2	198.5	198	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTTTGTCATGAATTTA	14	True	NA	NA	False	TATAAA	-39	NA	111661604	111669713	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_111661716_111666814_111666947_111669271
H1_mix_00088594	chr9	+	607	1	FSM	ENSG00000271631.1	ENST00000605480.1	610	1	-237	240	-237	-240	mono-exon	FALSE	NA	NA	NA	NA	NA	511	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACAGTCTAAAGAGAACAG	NA	False	NA	NA	False	NA	NA	NA	112884920	112885527	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_112884900_112885500
H1_mix_00088595	chr9	+	4421	19	NIC	ENSG00000138835.22	novel	4211	23	NA	NA	5	5	intron_retention	FALSE	canonical	3	10	junction_5	6.47216261298253	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTACATGGCAAGAAAGTGG	2	True	NA	15	True	AATAAA	-21	NA	113463736	113593008	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_113463882_113479490_113479542_113483058_113483118_113484137_113484233_113485624_113485694_113495785_113495847_113497313_113497405_113498024_113498081_113505441_113505524_113506387_113506494_113507286_113507639_113508540_113508581_113514457_113514655_113517540_113517625_113522929_113523042_113529220_113529265_113536795_113536919_113583449_113584428_113591332
H1_mix_00088596	chr9	+	2745	3	NNC	ENSG00000138835.22	novel	1725	3	NA	NA	-1	5	intron_retention	FALSE	canonical	1	1	junction_1	8	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTACATGGCAAGAAAGTGG	20	False	NA	15	True	AATAAA	-21	NA	113565074	113593008	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_113565166_113583449_113584428_113591332
H1_mix_00088597	chr9	+	1156	12	FSM	ENSG00000157657.15	ENST00000374124.4	1156	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_11	8.79894809640935	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGGTGAGTGTGCCCCTTG	44	False	NA	NA	False	NA	NA	NA	113876349	114032724	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_113876414_113969116_113969161_113988320_113988581_114001995_114002074_114002623_114002663_114007349_114007440_114008343_114008380_114008476_114008555_114016112_114016173_114016694_114016785_114028732_114028973_114032647
H1_mix_00088598	chr9	+	1159	3	FSM	ENSG00000136888.8	ENST00000678234.1	1385	3	226	0	149	0	multi-exon	FALSE	canonical	1	7	junction_1	1381.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAGCACACATATCACATA	207	False	NA	-50	True	NA	NA	NA	114587987	114598496	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_114588119_114592551_114592653_114597569
H1_mix_00088600	chr9	+	4578	9	FSM	ENSG00000157693.15	ENST00000374049.4	4578	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	20.9698444200237	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGTCTCGCATATTGT	6375	False	NA	16	True	AATAAA	-16	NA	114611205	114646422	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_114611565_114617117_114617302_114624349_114624460_114626895_114627007_114628100_114628251_114633767_114633879_114636989_114637071_114638543_114638727_114643133
H1_mix_00088601	chr9	+	975	5	ISM	ENSG00000157693.15	ENST00000288502.9	4490	9	14	18009	14	188	5prime_fragment	FALSE	canonical	3	57	junction_1	13.9530462623758	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTCTCTGCTTTTCCTG	-10	True	NA	4	True	ACTAAA	-24	NA	114611304	114628413	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_114611565_114617117_114617302_114624349_114624460_114626898_114627007_114628100
H1_mix_00088602	chr9	+	3219	1	Intergenic	novelGene_1597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCCCGAGGCGATCGGGC	6380	False	NA	NA	False	NA	NA	NA	115839217	115842436	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_115839200_115842400
H1_mix_00088604	chr9	+	573	1	Intergenic	novelGene_1603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTCATCACTTAAGGCAA	NA	False	NA	NA	False	NA	NA	NA	118490641	118491214	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_118490600_118491200
H1_mix_00088605	chr9	+	7537	43	NIC	ENSG00000119397.19	novel	7719	44	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_11	15.1240711564271	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTCTGTCCTCTGACT	5	True	NA	13	True	AATAAA	-14	NA	121074963	121177610	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_121075068_121088295_121088544_121090274_121090406_121094887_121095019_121096421_121096564_121098385_121098573_121107801_121107996_121112458_121112579_121113501_121113725_121115090_121115201_121118345_121118541_121123930_121124085_121125715_121125937_121135805_121135983_121138544_121138680_121140640_121140787_121141380_121141589_121142090_121142271_121143902_121144083_121144842_121144960_121145243_121145386_121146107_121146257_121148671_121148862_121150169_121150484_121152484_121152694_121154720_121154914_121157469_121157601_121157739_121157881_121157982_121158110_121158854_121159020_121160142_121160303_121161855_121161972_121162053_121162272_121164942_121165101_121166106_121166181_121167488_121167678_121168095_121168322_121169610_121169817_121171407_121171549_121173242_121173510_121173674_121173738_121175017_121175225_121177162
H1_mix_00088606	chr9	+	5722	32	NIC	ENSG00000119397.19	novel	5911	33	NA	NA	32	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	13.6646318798594	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTCTGTCCTCTGACT	51	False	NA	13	True	AATAAA	-14	NA	121121840	121177610	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_121121952_121123930_121124085_121125715_121125937_121135805_121135983_121138544_121138680_121140640_121140787_121141380_121141589_121142090_121142271_121143902_121144083_121144842_121144960_121145243_121145386_121146107_121146257_121148671_121148862_121150169_121150484_121152484_121152694_121154720_121154914_121157469_121157601_121157739_121157881_121157982_121158110_121158854_121159020_121160142_121160303_121161855_121161972_121162053_121162272_121164942_121165101_121166106_121166181_121167488_121167678_121168095_121168322_121169610_121169817_121173242_121173510_121173674_121173738_121175017_121175225_121177162
H1_mix_00088607	chr9	+	7189	16	NIC	ENSG00000136848.18	novel	485	4	NA	NA	-352	0	intron_retention	FALSE	canonical	0	0	junction_1	23.7511169328004	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGACTCGTGTCTCCATT	NA	False	NA	25	True	ATTAAA	-21	NA	121597915	121785530	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_121598627_121678677_121678782_121699324_121699459_121757012_121757167_121758897_121758997_121759884_121760440_121763504_121763650_121763734_121763880_121766493_121766731_121768431_121768634_121770545_121770725_121772606_121773496_121774259_121774413_121776197_121776392_121781463_121781552_121782330
H1_mix_00088609	chr9	+	5550	17	NNC	ENSG00000136848.18	novel	6784	16	NA	NA	30	-2	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_11	22.2576356280266	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCCCGACTCGTGTCTC	-28	True	NA	21	True	ATTAAA	-17	NA	121651623	121785526	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_121651900_121678677_121678782_121699324_121699459_121757012_121757167_121758897_121758997_121759884_121760440_121763504_121763650_121763734_121763880_121766493_121766731_121768431_121768634_121770545_121770725_121772672_121773496_121774259_121774413_121776197_121776392_121781463_121781552_121782330_121782402_121783535
H1_mix_00088610	chr9	+	6688	16	NNC	ENSG00000136848.18	novel	6784	16	NA	NA	30	0	intron_retention	FALSE	canonical	3	27	junction_11	21.1025011682396	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGACTCGTGTCTCCATT	-28	True	NA	25	True	ATTAAA	-21	NA	121651623	121785530	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_121651900_121678677_121678782_121699324_121699459_121757012_121757167_121758897_121758997_121759884_121760440_121763504_121763650_121763734_121763880_121766493_121766731_121768431_121768634_121770545_121770725_121772672_121773496_121774259_121774413_121776197_121776392_121781463_121781552_121782330
H1_mix_00088611	chr9	+	481	3	FSM	ENSG00000185681.13	ENST00000486801.1	479	3	-2	0	-2	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCCCCAGGTGTATTTTC	2174	False	NA	NA	False	AATAAA	-16	NA	122166765	122200083	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_122166916_122174495_122174628_122199884
H1_mix_00088612	chr9	+	1978	7	NIC	ENSG00000148187.18	novel	1501	5	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	49.6151858473458	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCTGACTTCTTTTCTT	546	False	NA	12	True	AATAAA	-23	NA	122265463	122323461	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_122265781_122270863_122271076_122280442_122280599_122285168_122285288_122291748_122291841_122313226_122313387_122322539
H1_mix_00088613	chr9	+	1501	5	FSM	ENSG00000148187.18	ENST00000394315.3	1501	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	61.8081709808663	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCTGACTTCTTTTCTT	27	False	NA	12	True	AATAAA	-23	NA	122270863	122323461	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_122271076_122280442_122280599_122285168_122285288_122291748_122291841_122322539
H1_mix_00088614	chr9	+	2105	1	FSM	ENSG00000261094.2	ENST00000566531.1	914	1	-1197	6	600	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGATGTAACCTTGTCCA	6530	False	NA	19	True	AATAAA	-21	NA	122938222	122940327	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_122938200_122940300
H1_mix_00088616	chr9	+	5082	27	NIC	ENSG00000011454.18	novel	4986	26	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_15	60.6590529934252	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCATTGCTTTGTAAAAAC	-22	True	NA	77	True	ATTAAA	-19	NA	122941008	123104866	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_122941089_122957010_122957210_122984484_122984720_122986214_122986420_122989296_122989472_122990055_122990214_122996040_122996152_122996538_122996606_122997258_122997362_122998596_122998767_123010353_123010529_123015542_123015637_123020308_123020460_123065347_123065462_123070349_123070425_123071411_123071502_123073551_123073678_123074284_123074429_123076244_123076287_123076633_123076763_123089757_123089851_123090274_123090386_123097740_123097846_123098714_123098799_123099477_123099550_123101565_123101764_123103090
H1_mix_00088618	chr9	+	456	2	NNC	ENSG00000136950.13	novel	2507	6	NA	NA	-67	-13294	at_least_one_novel_splicesite	FALSE	non_canonical	2	8	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGAAGGCTTTCAGGAG	1842	False	NA	NA	False	AATGAA	-18	NA	124862062	124864107	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_124862397_124863985
H1_mix_00088619	chr9	+	1208	6	NIC	ENSG00000136933.17	novel	1671	8	NA	NA	-7	-152	intron_retention	FALSE	canonical	3	42	junction_3	103.186045568187	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTACTTTCAGAATAGTTA	-1	True	NA	22	True	AATAAA	-23	NA	125200534	125234006	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_125200907_125203007_125203067_125207563_125207722_125227909_125228060_125232595_125232746_125233687
H1_mix_00088620	chr9	+	1345	7	NIC	ENSG00000136933.17	novel	1671	8	NA	NA	15	-152	intron_retention	FALSE	canonical	3	32	junction_3	98.2937773547576	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTACTTTCAGAATAGTTA	24	False	NA	22	True	AATAAA	-23	NA	125200559	125234006	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_125200907_125203007_125203067_125207563_125207722_125220538_125220701_125227909_125228060_125232595_125232746_125233687
H1_mix_00088621	chr9	+	5147	27	NIC	ENSG00000165219.23	novel	5207	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_13	50.6873465530769	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGCTGTGACATACTGTC	9	True	NA	14	True	AATAAA	-19	NA	125261828	125363329	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_125261960_125298889_125299107_125301982_125302827_125305062_125305150_125307412_125307548_125307690_125307881_125312451_125312613_125321432_125321500_125323797_125323924_125326415_125326590_125330077_125330219_125331925_125332061_125332509_125332630_125335171_125335253_125337017_125337096_125337220_125337592_125341176_125341265_125342218_125342300_125346818_125346942_125349389_125349520_125350294_125350405_125350712_125350873_125354653_125354842_125355643_125355858_125359419_125359493_125360527_125360726_125362605
H1_mix_00088625	chr9	+	6287	8	FSM	ENSG00000136944.19	ENST00000373474.9	6312	8	25	0	25	0	multi-exon	FALSE	canonical	0	0	junction_2	1.98976975388345	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGTCTTCTCCTTGGTG	18	False	NA	7	True	AATAAA	-16	NA	126613952	126701032	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_126614589_126615382_126615570_126690835_126691069_126693141_126693324_126693523_126693602_126693745_126693813_126695838_126696004_126696293
H1_mix_00088626	chr9	+	1166	9	NIC	ENSG00000136828.19	novel	1672	12	NA	NA	0	7	combination_of_known_junctions	FALSE	canonical	2	14	junction_8	37.8087291508191	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAGAATAATTTGTCACA	-19	True	NA	13	True	AATAAA	-22	NA	126914781	127079860	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_126915013_126962224_126962347_126965843_126965952_126977694_126977746_127034430_127034515_127050042_127050133_127052846_127052940_127069229_127069357_127079600
H1_mix_00088627	chr9	+	2412	19	NIC	ENSG00000136828.19	novel	6330	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_3	35.3948189693992	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTCAACAGCAGAGGATGA	-19	True	NA	12	True	AATAAA	-20	NA	126914781	127217344	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_126915013_126962224_126962347_126965843_126965952_127034430_127034515_127050042_127050133_127052846_127052940_127069229_127069357_127166068_127166207_127168678_127168773_127174714_127174783_127195090_127195218_127196473_127196632_127199014_127199067_127210694_127210779_127212130_127212237_127212626_127212720_127212943_127213050_127214750_127214843_127216905
H1_mix_00088629	chr9	+	1817	10	NIC	ENSG00000136856.18	novel	2145	10	NA	NA	7	-28	combination_of_known_junctions	FALSE	canonical	3	24	junction_5	62.4294169343702	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGGAAATTTGTTTGCCA	5	True	NA	-16	True	NA	NA	NA	127397144	127407624	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_127397287_127397375_127397539_127397904_127398112_127399906_127400007_127402556_127402754_127403737_127403804_127403958_127404068_127404817_127404992_127405419_127405566_127407111
H1_mix_00088631	chr9	+	3204	27	FSM	ENSG00000148356.15	ENST00000676170.1	3185	27	-19	0	2	0	multi-exon	TRUE	canonical	1	1	junction_15	44.2021311971138	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTCTTCAGTGCGCTTC	5	False	NA	8	True	NA	NA	NA	127451490	127503483	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127451670_127451928_127452085_127454495_127454600_127454997_127455055_127455575_127455621_127457315_127457394_127459002_127459072_127461172_127461258_127462251_127462374_127467739_127467831_127473800_127473932_127478933_127478964_127479382_127479506_127479838_127479979_127481182_127481228_127482732_127482814_127482949_127483021_127485735_127485836_127487675_127487764_127489443_127489519_127491214_127491296_127492801_127492898_127495319_127495419_127495963_127496096_127497252_127497335_127501009_127501144_127502773
H1_mix_00088633	chr9	+	3040	25	FSM	ENSG00000148356.15	ENST00000675572.1	3026	25	-14	0	2	0	multi-exon	FALSE	canonical	1	4	junction_21	35.5805034003487	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGCCTGAGTCATCAC	5	False	NA	24	True	AATAAA	-16	NA	127451490	127503499	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127451670_127451928_127452085_127454495_127454600_127454997_127455055_127455575_127455621_127457315_127457394_127459002_127459072_127461172_127461258_127462251_127462374_127467739_127467831_127473800_127473932_127478933_127478964_127479382_127479506_127479838_127479979_127481182_127481228_127482949_127483021_127485735_127485836_127487675_127487764_127489443_127489519_127491214_127491296_127492801_127492898_127495963_127496096_127497252_127497335_127501009_127501144_127502773
H1_mix_00088634	chr9	+	3045	25	FSM	ENSG00000148356.15	ENST00000674771.1	3031	25	-14	0	2	0	multi-exon	FALSE	canonical	1	4	junction_21	43.8899942722965	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGCCTGAGTCATCAC	5	False	NA	24	True	AATAAA	-16	NA	127451490	127503499	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127451670_127451928_127452085_127454495_127454600_127454997_127455055_127455575_127455621_127457315_127457394_127459002_127459072_127461172_127461258_127462251_127462374_127467739_127467831_127473800_127473932_127478933_127478964_127479382_127479506_127479838_127479979_127481182_127481228_127482949_127483021_127485735_127485841_127487675_127487764_127489443_127489519_127491214_127491296_127492801_127492898_127495963_127496096_127497252_127497335_127501009_127501144_127502773
H1_mix_00088635	chr9	+	2772	22	NIC	ENSG00000148356.15	novel	3376	25	NA	NA	12	-4920	intron_retention	FALSE	canonical	0	0	junction_17	34.3376590630749	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGCCTCTGCCCTGCCTC	10	True	NA	NA	False	GGGGCT	-8	NA	127451526	127496383	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_127452085_127454495_127454600_127454997_127455055_127455575_127455621_127457315_127457394_127459002_127459072_127461172_127461258_127462251_127462374_127467739_127467831_127473800_127473932_127478933_127478964_127479382_127479506_127479838_127479979_127481182_127481228_127482949_127483021_127485735_127485836_127487675_127487764_127489379_127489519_127491214_127491296_127492801_127492898_127495319_127495419_127495963
H1_mix_00088637	chr9	+	2582	1	FSM	ENSG00000136854.24	ENST00000628768.1	2582	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCAGTCTGGCTTTCCTT	7648	False	NA	26	True	AATAAA	-36	NA	127690133	127692715	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_127690100_127692700
H1_mix_00088639	chr9	+	3886	21	NIC	ENSG00000106976.21	novel	3254	23	NA	NA	-9	-1	combination_of_known_splicesites	TRUE	canonical	1	12	junction_9	137.515308238756	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCTCCTCTGCTGGTTGT	7	False	NA	22	True	AATAAA	-23	NA	128203369	128255243	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_128203632_128218230_128218305_128218581_128218732_128219048_128219253_128219987_128220087_128220180_128220342_128222196_128222340_128222460_128222597_128222792_128222861_128224250_128224390_128234020_128234108_128239444_128239516_128239727_128239780_128242231_128242346_128246393_128246504_128247374_128247487_128248582_128248754_128250114_128250357_128250724_128250941_128253100_128253138_128254005
H1_mix_00088640	chr9	+	3226	22	FSM	ENSG00000106976.21	ENST00000372923.8	3217	22	-9	0	-9	0	multi-exon	FALSE	canonical	0	0	junction_21	137.82809958065	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCCTCTGCTGGTTGTG	7	False	NA	23	True	AATAAA	-24	NA	128203369	128255244	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128203632_128218230_128218305_128218581_128218732_128219048_128219253_128219987_128220087_128220180_128220342_128222196_128222340_128222460_128222597_128222792_128222861_128224250_128224390_128234020_128234108_128239444_128239516_128239727_128239780_128239984_128239997_128242231_128242346_128246393_128246504_128247374_128247487_128247923_128247936_128248582_128248754_128250114_128250357_128250724_128250941_128254653
H1_mix_00088643	chr9	+	2475	13	NIC	ENSG00000106976.21	novel	3254	23	NA	NA	457	0	combination_of_known_junctions	FALSE	canonical	3	109	junction_4	80.7727866026396	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCCTCTGCTGGTTGTG	NA	False	NA	23	True	AATAAA	-24	NA	128234020	128255244	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_128234108_128239444_128239516_128239727_128239780_128239984_128239997_128242231_128242346_128246393_128246504_128247374_128247487_128247923_128247936_128248582_128248754_128250114_128250357_128250724_128250941_128253100_128253138_128254005
H1_mix_00088646	chr9	+	2252	13	NNC	ENSG00000167123.20	novel	2308	13	NA	NA	14	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	13.4935684268057	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATATATATGTATGTAT	16	True	NA	NA	False	AATAAA	-16	NA	128420870	128437344	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_128421075_128422867_128422979_128423145_128423264_128424137_128424273_128424409_128424615_128428301_128428422_128428756_128428834_128428929_128429037_128431170_128431265_128434101_128434230_128434409_128434614_128435652_128435906_128436848
H1_mix_00088647	chr9	+	3676	22	NIC	ENSG00000136811.17	novel	3653	23	NA	NA	6	-2	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	22.4341818885112	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTAAGGCTCCATTTGAT	53	False	NA	41	True	AAAAAG	-15	NA	128456134	128500958	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_128456256_128457197_128457438_128459566_128459658_128460512_128460667_128460941_128461068_128469182_128469354_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509_128494669_128496040_128496142_128498412_128498576_128499000_128499127_128500066
H1_mix_00088648	chr9	+	2238	17	NIC	ENSG00000136811.17	novel	3791	21	NA	NA	-4	1	combination_of_known_junctions	FALSE	canonical	3	33	junction_4	17.1954527055847	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTGTTTGCACAAAGT	13	True	NA	7	True	AATAAA	-18	NA	128456162	128494837	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_128456256_128459566_128459658_128460512_128460667_128460941_128461011_128469182_128469354_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509
H1_mix_00088649	chr9	+	3547	21	NIC	ENSG00000136811.17	novel	3791	21	NA	NA	-2	-17	combination_of_known_junctions	FALSE	canonical	1	2	junction_18	22.1269066975029	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTGTAATCAGTTATTT	15	False	NA	26	True	NA	NA	NA	128456164	128500943	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_128456256_128459566_128459658_128460512_128460667_128460941_128461068_128469182_128469354_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509_128494669_128496040_128496298_128498412_128498576_128499000_128499127_128500066
H1_mix_00088650	chr9	+	3906	15	FSM	ENSG00000119392.16	ENST00000684331.1	3901	15	-5	0	0	0	multi-exon	FALSE	canonical	3	92	junction_4	9.51475760305526	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGATACTGCAGAGGCA	-24	True	NA	NA	False	NA	NA	NA	128504696	128542107	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128504905_128508875_128509098_128515528_128515640_128522667_128522817_128523279_128523341_128523591_128523847_128525191_128525424_128527178_128527292_128527455_128527526_128533512_128533656_128533760_128533952_128536354_128536485_128537985_128538091_128539615_128539699_128540274
H1_mix_00088653	chr9	+	2218	14	FSM	ENSG00000119392.16	ENST00000372770.4	2218	14	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_4	9.82027850025065	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGTCTGTCTTAAATAT	10	True	NA	NA	False	AATAAA	-17	NA	128504730	128539877	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128504905_128508875_128509098_128515528_128515640_128522667_128522817_128523279_128523341_128523591_128523847_128525191_128525424_128527178_128527292_128527455_128527526_128533512_128533656_128533760_128533952_128536354_128536485_128537985_128538091_128539615
H1_mix_00088654	chr9	+	7724	56	NNC	ENSG00000197694.18	novel	7812	56	NA	NA	-19	-123	at_least_one_novel_splicesite	FALSE	canonical	3	254	junction_4	122.634833874144	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATCTGTGTCTTGAAGCA	NA	False	NA	NA	False	NA	NA	NA	128552538	128633523	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_128552697_128566737_128566978_128568771_128568898_128574674_128574820_128575202_128575346_128576822_128576957_128577128_128577274_128577351_128577507_128578109_128578246_128579636_128579739_128580921_128581060_128581781_128581893_128582478_128582557_128582693_128582850_128583076_128583282_128583787_128583970_128584281_128584526_128584720_128584844_128585747_128585966_128587605_128587699_128588808_128588944_128591476_128591626_128594174_128594374_128598399_128598505_128598962_128598987_128600079_128600116_128603542_128603591_128604325_128604418_128605033_128605179_128605295_128605478_128607603_128607704_128607851_128608050_128608129_128608277_128608873_128608978_128609121_128609285_128609650_128609666_128611713_128611846_128612108_128612247_128613380_128613486_128615631_128615841_128617639_128617761_128617986_128618109_128618870_128619004_128621157_128621257_128624327_128624488_128625102_128625180_128625768_128625979_128626390_128626688_128627385_128627499_128627924_128627943_128630320_128630376_128632126_128632324_128632430_128632485_128632571_128632719_128632807_128632956_128633208
H1_mix_00088655	chr9	+	7844	56	NNC	ENSG00000197694.18	novel	7875	57	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_22	135.14245193147	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGACTTCCCCCAAAGCTT	-3	True	NA	-9	True	AATAAA	-2	NA	128552586	128633646	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_128552697_128566737_128566978_128568771_128568898_128574674_128574820_128575202_128575346_128576822_128576957_128577128_128577274_128577351_128577507_128578109_128578246_128579636_128579739_128580921_128581060_128581781_128581893_128582478_128582557_128582693_128582850_128583076_128583282_128583787_128583970_128584281_128584526_128584720_128584844_128585747_128585966_128587605_128587699_128588808_128588944_128591476_128591626_128592982_128593043_128594174_128594374_128598399_128598505_128598962_128598987_128600079_128600116_128603542_128603591_128604325_128604418_128605033_128605179_128605295_128605478_128607603_128607704_128607851_128608050_128608129_128608277_128608873_128608978_128609121_128609285_128611713_128611846_128612108_128612247_128613380_128613486_128615631_128615841_128617639_128617761_128617986_128618109_128618870_128619004_128621157_128621257_128624327_128624488_128625102_128625180_128625768_128625979_128626390_128626688_128627385_128627499_128627924_128627943_128630320_128630376_128632126_128632324_128632430_128632485_128632571_128632719_128632807_128632956_128633208
H1_mix_00088658	chr9	+	2423	5	FSM	ENSG00000197694.18	ENST00000630763.1	1503	5	-920	0	269	0	multi-exon	FALSE	canonical	3	584	junction_1	43.4532795079957	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGACTTCCCCCAAAGCTT	NA	False	NA	-9	True	AATAAA	-2	NA	128630687	128633646	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128632324_128632430_128632485_128632571_128632719_128632807_128632956_128633208
H1_mix_00088660	chr9	+	839	9	FSM	ENSG00000107021.16	ENST00000466056.1	839	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	113.806785276626	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGTGGAAAGGTAAGAAG	-8	True	NA	NA	False	AATGAA	-44	NA	128787332	128803448	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_128787377_128788333_128788408_128789873_128789950_128790734_128790776_128791379_128791442_128791593_128791694_128792491_128792575_128797054_128797215_128803249
H1_mix_00088661	chr9	+	1367	12	ISM	ENSG00000175287.19	ENST00000372592.8	2047	13	941	0	175	0	3prime_fragment	FALSE	canonical	3	17	junction_1	25.7909587592049	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCCTACTGAGCCTTCT	118	False	NA	21	True	AATAAA	-18	NA	128921922	128942038	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_128922048_128922282_128922357_128927037_128927197_128933781_128933858_128934010_128934059_128936447_128936504_128936582_128936646_128937756_128937779_128940368_128940498_128940598_128940716_128941444_128941572_128941667
H1_mix_00088662	chr9	+	1196	10	ISM	ENSG00000175287.19	ENST00000308941.9	1599	12	899	0	-7	0	3prime_fragment	FALSE	canonical	3	17	junction_6	22.7547308878347	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCCTACTGAGCCTTCT	8	True	NA	21	True	AATAAA	-18	NA	128922306	128942038	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_128922357_128927037_128927197_128933781_128933858_128934010_128934059_128936447_128936504_128936582_128936646_128940368_128940498_128940598_128940716_128941444_128941572_128941667
H1_mix_00088664	chr9	+	6114	44	NIC	ENSG00000095319.14	novel	5689	44	NA	NA	-2	-454	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	132.012217341093	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGCAGGCGTTTGTCCG	-8	True	NA	NA	False	NA	NA	NA	128947696	129006642	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_128948629_128949188_128949244_128952772_128952847_128956349_128956435_128956951_128957033_128958009_128958055_128958801_128958895_128959014_128959135_128968505_128968718_128969399_128969515_128970757_128970959_128973159_128973250_128979261_128979328_128980605_128980726_128981263_128981391_128982548_128982702_128982901_128983029_128983292_128983381_128983473_128983551_128984899_128985015_128986557_128986679_128986808_128986876_128987588_128987718_128988046_128988187_128990119_128990227_128993196_128993404_128993524_128993695_128994372_128994443_128994855_128994924_128995318_128995515_128998150_128998229_128998537_128998624_128999171_128999318_128999623_128999806_129001528_129001730_129001883_129001977_129002816_129002976_129003316_129003455_129005146_129005222_129005302_129005531_129005644_129005777_129006049_129006124_129006238_129006369_129006501
H1_mix_00088665	chr9	+	640	4	FSM	ENSG00000233901.7	ENST00000444125.3	643	4	0	3	0	-1	multi-exon	FALSE	canonical	0	0	junction_2	4.54606056566195	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTCTTTCAGCATTTC	0	True	NA	8	True	ATTAAA	-13	NA	129336922	129347461	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129336989_129338791_129338918_129341831_129342044_129347225
H1_mix_00088666	chr9	+	848	4	FSM	ENSG00000148335.15	ENST00000372480.1	852	4	4	0	4	0	multi-exon	FALSE	canonical	0	0	junction_1	243.410490050587	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGTCCTGGTGGGGGGA	153	False	NA	-85	True	GGGGCT	-20	NA	129626447	129635492	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129626542_129632649_129632866_129634053_129634307_129635207
H1_mix_00088667	chr9	+	4371	26	FSM	ENSG00000136878.14	ENST00000358355.5	4371	26	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	26.728142471934	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACGGCCACACAGTCGTC	18	False	NA	13	True	AATAAA	-16	NA	129835477	129881828	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_129835598_129849812_129849925_129852539_129852637_129856306_129856361_129858049_129858113_129858466_129858599_129860936_129861034_129861542_129861613_129863185_129863300_129865302_129865382_129868004_129868450_129868861_129869003_129869309_129869426_129869671_129869845_129870452_129870548_129873481_129873516_129873698_129873745_129874575_129874757_129874828_129874956_129875309_129875480_129875559_129875642_129876129_129876239_129878337_129878441_129879572_129879645_129880112_129880290_129880466
H1_mix_00088668	chr9	+	4452	26	NNC	ENSG00000136878.14	novel	825	8	NA	NA	14027	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	29.8270749487777	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACGGCCACACAGTCGTC	3230	False	NA	13	True	AATAAA	-16	NA	129849504	129881828	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_129849618_129849812_129849925_129852539_129852637_129856306_129856361_129858049_129858113_129858466_129858599_129860936_129861034_129861542_129861613_129863185_129863300_129865302_129865382_129868004_129868450_129868861_129869003_129869309_129869426_129869671_129869845_129870452_129870548_129873481_129873516_129873698_129873745_129874575_129874757_129874828_129874956_129875309_129875480_129875559_129875642_129876129_129876239_129878337_129878441_129879572_129879645_129880112_129880290_129880378
H1_mix_00088669	chr9	+	5280	7	NIC	ENSG00000107130.10	novel	5164	8	NA	NA	-141	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	114.990458541374	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTGTGTGGGCCTGTTG	NA	False	NA	13	True	ATTAAA	-25	NA	130172262	130237303	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_130172728_130217831_130217971_130219724_130219804_130222649_130222739_130223081_130223160_130226388_130226505_130232989
H1_mix_00088670	chr9	+	1052	3	ISM	ENSG00000148357.18	ENST00000624552.4	15613	98	165449	10	2162	-8	3prime_fragment	FALSE	canonical	3	20	junction_1	6	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAACCAACTTGGTTTCT	NA	False	NA	-2	True	TATAAA	-10	NA	130431327	130434113	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_130431487_130432428_130432556_130433347
H1_mix_00088671	chr9	+	1979	8	FSM	ENSG00000130713.17	ENST00000546165.6	1928	8	-43	-8	16	2	multi-exon	FALSE	canonical	2	2	junction_5	68.0039014487029	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATCTAAAAATGGTGCCC	3427	False	NA	16	True	NA	NA	NA	130693736	130704894	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_130693914_130695491_130695594_130697581_130697628_130698161_130698252_130699328_130699395_130702142_130702311_130703052_130703182_130703693
H1_mix_00088672	chr9	+	2572	6	FSM	ENSG00000050555.19	ENST00000678544.1	2572	6	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_4	14.5134420452214	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACACGTGAGGGTGCATGT	NA	False	NA	11	True	CATAAA	-27	NA	131077798	131092058	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131079299_131082058_131082162_131085523_131085724_131087475_131087623_131087717_131087818_131091536
H1_mix_00088673	chr9	+	6613	36	NIC	ENSG00000126883.18	novel	7568	36	NA	NA	2	0	intron_retention	FALSE	canonical	3	35	junction_13	37.6157153436742	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTATGTGGGTTTTTTCAGA	-30	True	NA	13	True	ATTAAA	-21	NA	131125587	131233707	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_131125750_131127523_131127720_131128331_131128484_131129278_131129478_131130765_131130837_131132595_131132660_131133105_131133210_131134897_131135005_131135939_131136007_131139280_131139408_131140548_131140711_131144279_131144755_131146128_131146305_131147486_131147585_131150323_131150411_131150615_131150766_131151735_131151895_131159382_131159487_131162990_131163174_131163869_131163956_131164060_131164145_131174054_131174319_131175459_131175622_131178310_131178411_131187288_131187365_131189052_131189132_131192207_131192293_131195232_131195295_131197215_131199016_131201646_131201718_131215211_131215369_131222777_131222931_131228159_131228332_131230629_131230770_131232283_131232309_131233453
H1_mix_00088674	chr9	+	6177	31	NIC	ENSG00000126883.18	novel	7568	36	NA	NA	23	0	intron_retention	FALSE	canonical	1	3	junction_23	44.1910624447976	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTATGTGGGTTTTTTCAGA	1	True	NA	13	True	ATTAAA	-21	NA	131125618	131233707	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_131125750_131127523_131127720_131128331_131128484_131129278_131129478_131130765_131130837_131132595_131132660_131133105_131133210_131134897_131135005_131135939_131136007_131139280_131139408_131140548_131140711_131144279_131144755_131146128_131146305_131147489_131147585_131150323_131150411_131150615_131150766_131151735_131151895_131159382_131159487_131162990_131163174_131163869_131163956_131164060_131164145_131174054_131174319_131175459_131175622_131197215_131199016_131201646_131201718_131215211_131215369_131222777_131222931_131228159_131228332_131230629_131230770_131232283_131232309_131233453
H1_mix_00088675	chr9	+	9187	31	NIC	ENSG00000288701.1	novel	11253	32	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	109	junction_15	67.3382918966286	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAAAGCTGAACGTGCTT	-33	True	NA	10	True	AATAAA	-13	NA	131394052	131500190	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_131394264_131430089_131430260_131432616_131432795_131436619_131436723_131438988_131439062_131444184_131444329_131446400_131446643_131447084_131447207_131447661_131447805_131455075_131455167_131459163_131459357_131464762_131465079_131467562_131467754_131470787_131470984_131473507_131473725_131477743_131477950_131478473_131478620_131479251_131479394_131481725_131481809_131482373_131482563_131482709_131482908_131483358_131483446_131484685_131484791_131484947_131485141_131486084_131486183_131487166_131487295_131487855_131488097_131491424_131491581_131492168_131492261_131494404_131494487_131495739
H1_mix_00088676	chr9	+	7188	30	NIC	ENSG00000288701.1	novel	9157	31	NA	NA	0	-1871	combination_of_known_junctions	FALSE	canonical	3	40	junction_27	80.5918062770725	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATTTATATATAATGTCT	0	True	NA	6	True	AGTAAA	-12	NA	131394085	131498300	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_131394264_131430089_131430260_131432616_131432795_131436619_131436723_131438988_131439062_131444184_131444329_131446400_131446643_131447084_131447207_131447661_131447805_131455075_131455167_131459163_131459357_131464762_131465079_131467562_131467754_131470787_131470984_131473507_131473725_131477743_131477950_131478473_131478620_131479251_131479394_131481725_131481809_131482370_131482563_131482709_131482908_131483358_131483446_131484685_131484791_131484947_131485141_131486084_131486183_131487166_131487295_131487855_131488097_131491421_131491581_131492168_131492261_131495739
H1_mix_00088677	chr9	+	11202	32	NIC	ENSG00000288701.1	novel	11253	32	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	73.8548510380478	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAAAGTTTAAAAA	11	True	NA	-9	True	NA	NA	NA	131394096	131500171	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_131394264_131430093_131430260_131432616_131432795_131436619_131436723_131438988_131439062_131444184_131444329_131446400_131446643_131447084_131447207_131447661_131447805_131455075_131455167_131459163_131459357_131464762_131465079_131467562_131467754_131470787_131470984_131473507_131473725_131474453_131476536_131477743_131477950_131478473_131478620_131479251_131479394_131481725_131481809_131482373_131482563_131482709_131482908_131483358_131483446_131484685_131484791_131484947_131485141_131486084_131486183_131487166_131487295_131487855_131488097_131491424_131491581_131492168_131492261_131494404_131494487_131495739
H1_mix_00088678	chr9	+	4877	16	NIC	ENSG00000288701.1	novel	11253	32	NA	NA	30	-1935	combination_of_known_junctions	FALSE	canonical	3	173	junction_15	65.9483299426318	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATTTATATGTATTGAT	1724	False	NA	9	True	AATAAA	-19	NA	131476219	131498236	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_131476536_131477743_131477950_131478473_131478620_131479251_131479394_131481725_131481809_131482373_131482563_131482709_131482908_131483358_131483446_131484685_131484791_131484947_131485141_131486084_131486183_131487166_131487295_131487855_131488097_131491424_131491581_131492168_131492261_131495739
H1_mix_00088679	chr9	+	406	1	FSM	ENSG00000235284.1	ENST00000428514.1	86	1	14	-334	14	334	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCACCTCCCGCCCCTG	NA	False	NA	NA	False	NA	NA	NA	131485678	131486084	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131485700_131486100
H1_mix_00088680	chr9	+	3293	20	FSM	ENSG00000130714.19	ENST00000676640.1	3309	20	16	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	39.0563907965119	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTAGTTGGTGTTTGTT	-44	True	NA	14	True	ATTAAA	-17	NA	131502921	131523799	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_131503314_131504188_131504341_131506113_131506221_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131509997_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
H1_mix_00088681	chr9	+	11894	4	NNC	ENSG00000283526.1	novel	1312	4	NA	NA	1563	7667	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	53.0471488394994	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACTTGTAACTTAATTTT	1529	False	NA	9	True	NA	NA	NA	131547076	131566287	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_131549636_131554073_131555030_131556069_131556214_131558052
H1_mix_00088682	chr9	+	1036	2	FSM	ENSG00000196358.12	ENST00000483055.1	358	2	-12	-666	-12	662	multi-exon	FALSE	canonical	3	7	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGGCCTGTTTTCTTTCTG	NA	False	NA	12	True	AGTAAA	-22	NA	132241428	132242835	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_132241505_132241875
H1_mix_00088683	chr9	+	2227	4	FSM	ENSG00000165698.16	ENST00000372136.7	2536	4	309	0	309	0	multi-exon	FALSE	canonical	2	5	junction_1	2.86744175568088	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCCTGACTTGGTTTCC	1	True	NA	5	True	AATAAA	-17	NA	132878335	132890031	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_132878437_132883910_132884092_132887368_132887572_132888289
H1_mix_00088685	chr9	+	4538	19	NIC	ENSG00000160323.19	novel	4934	29	NA	NA	6726	0	intron_retention	FALSE	canonical	1	1	junction_3	9.50957931590205	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGCGTTTTTTTCTTATAA	34	False	NA	13	True	AATAAA	-18	NA	133429092	133459386	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_133430102_133432587_133432693_133433377_133433530_133436828_133436956_133437748_133437898_133438245_133438367_133439365_133439447_133440343_133440526_133442398_133442744_133443375_133443562_133444862_133445053_133445698_133445820_133448598_133448729_133449782_133449966_133454414_133454620_133455284_133455800_133456068_133456216_133456542_133456720_133458973
H1_mix_00088687	chr9	+	516	1	FSM	ENSG00000273473.1	ENST00000608264.1	572	1	26	30	26	-30	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTGTGTGTGATCTCTC	NA	False	NA	NA	False	AATAAA	-1	NA	134168794	134169310	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_134168800_134169300
H1_mix_00088688	chr9	+	3512	2	ISM	ENSG00000130635.16	ENST00000618395.4	8437	66	191399	1173	8482	-1173	3prime_fragment	FALSE	canonical	3	96	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGGTGTGACCATAG	4518	False	NA	5	True	AATAAA	-17	NA	134833203	134843667	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_134835205_134842156
H1_mix_00088691	chr9	+	4772	4	NIC	ENSG00000196422.11	novel	936	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	47.932823363073	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTACTGTTCTTTTTAAAT	-16	True	NA	16	True	AATAAA	-16	NA	135479662	135488892	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_135479725_135482682_135482816_135483949_135484083_135484448
H1_mix_00088692	chr9	+	881	5	FSM	ENSG00000122140.11	ENST00000485333.5	881	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	256.736245980189	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCACCTCTACTGCAGGC	14	True	NA	NA	False	NA	NA	NA	135500706	135503976	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_135500754_135500997_135501124_135501843_135501974_135503135_135503279_135503541
H1_mix_00088693	chr9	+	5457	21	Fusion	ENSG00000196642.19_ENSG00000213213.14	novel	3104	15	NA	NA	-11	0	intron_retention	TRUE	canonical	2	12	junction_5	293.913575732731	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCACTCTGCGTGTGTCTG	8	True	NA	17	True	CATAAA	-10	NA	136800303	136841177	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr9_+_136800494_136802663_136802787_136804501_136804628_136804761_136804817_136805356_136805458_136806077_136806868_136806969_136808327_136823524_136823660_136825778_136825827_136828493_136828547_136829392_136829485_136831720_136831862_136832264_136832371_136835741_136835846_136837345_136837663_136837861_136838016_136838908_136839122_136839221_136839487_136839693_136839866_136840153_136840213_136840321
H1_mix_00088694	chr9	+	3944	11	NIC	ENSG00000127191.18	novel	680	6	NA	NA	576	1272	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	73.8947900734551	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAATTGCCTGTTGATGTC	3336	False	NA	NA	False	NA	NA	NA	136890110	136927879	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_136890543_136898712_136898929_136899593_136899673_136900421_136900521_136908069_136908232_136909919_136909995_136916540_136916616_136920233_136920516_136921037_136921216_136923851_136924001_136925682
H1_mix_00088695	chr9	+	1322	1	FSM	ENSG00000213590.2	ENST00000395082.2	1322	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTACCTTTGCACATTGAA	4882	False	NA	NA	False	AATAGA	-11	NA	136935839	136937161	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136935800_136937200
H1_mix_00088696	chr9	+	737	7	FSM	ENSG00000107317.13	ENST00000371625.8	812	7	25	50	13	0	multi-exon	FALSE	canonical	1	6	junction_1	33.0928827527746	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCACTCAGGCTTCATCC	24	False	NA	-39	True	NA	NA	NA	136977528	136981692	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_136977693_136978992_136979133_136979222_136979300_136979945_136980063_136980182_136980285_136980832_136980856_136981578
H1_mix_00088698	chr9	+	791	6	NIC	ENSG00000107317.13	novel	812	7	NA	NA	84	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_2	35.0941590581681	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTGGCTCCTGGCTGTCT	20	False	NA	11	True	AATAAA	-20	NA	136978926	136981742	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_136979133_136979222_136979402_136979945_136980063_136980182_136980285_136980832_136980856_136981578
H1_mix_00088699	chr9	+	784	7	NNC	ENSG00000148362.11	novel	808	7	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_2	125.315158256649	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGGTGGGGCTCTGAC	22	True	NA	23	True	AATAAA	-18	NA	136992449	136993976	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_+_136992563_136992639_136992705_136992924_136992975_136993052_136993244_136993342_136993412_136993579_136993665_136993765
H1_mix_00088701	chr9	+	4916	13	ISM	ENSG00000188566.15	ENST00000684003.1	4817	14	-16	0	-1	0	intron_retention	FALSE	canonical	3	92	junction_9	17.105067475264	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATTGTTACTACTTGTC	-29	True	NA	4	True	AATAAA	-15	NA	137205683	137219361	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_+_137205913_137206231_137206310_137212501_137212600_137213779_137213879_137213966_137214069_137214203_137214414_137214569_137214692_137214797_137215019_137215094_137215203_137215406_137215522_137215658_137215806_137215898_137216018_137216093
H1_mix_00088702	chr9	+	1624	14	FSM	ENSG00000188747.9	ENST00000683555.1	1614	14	-10	0	-10	0	multi-exon	TRUE	canonical	2	2	junction_11	4.70049726690837	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCACCCTCCAAGTGGGT	-27	True	NA	7	True	AATAAA	-17	NA	137423382	137434406	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137423707_137426247_137426331_137428032_137428142_137428881_137429017_137429275_137429384_137430783_137430844_137431074_137431101_137431235_137431342_137433028_137433075_137433204_137433264_137433452_137433608_137433749_137433865_137433964_137434080_137434223
H1_mix_00088703	chr9	+	5059	26	NIC	ENSG00000181090.21	novel	4208	24	NA	NA	113	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	136.602172749924	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGTTTTTATTATGACAC	1190	False	NA	15	True	AATAAA	-20	NA	137667119	137836127	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_+_137667228_137710966_137711031_137716625_137717183_137728348_137728530_137743391_137743529_137743901_137744091_137754170_137754292_137757879_137758012_137762674_137762821_137775108_137775253_137776617_137776845_137777881_137778056_137779634_137779718_137782290_137782398_137790847_137790971_137798812_137798915_137800879_137800985_137811460_137811616_137813005_137813174_137813385_137813531_137814430_137814509_137815946_137816063_137817438_137817526_137818059_137818139_137834348_137834525_137834772
H1_mix_00088706	chr9	+	9756	46	FSM	ENSG00000148408.14	ENST00000371363.5	9758	46	-6	8	-6	-3	multi-exon	FALSE	canonical	0	0	junction_1	6.91536132260797	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCCACCATGCTGCCAT	27	False	NA	NA	False	AATAAA	-24	NA	137877808	138124616	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_+_137878218_137879053_137879160_137882743_137882884_137913179_137913272_137914653_137914807_137917240_137917432_137952273_137952378_137955697_137955814_137956770_137956828_137957597_137957688_137971382_137971593_137975906_137976020_137984137_137984251_137986412_137986545_137986781_137986855_138006766_138006885_138010009_138010078_138013128_138013236_138023010_138023812_138024954_138025173_138043773_138043901_138046903_138047034_138047398_138047459_138049208_138049316_138052091_138052189_138053845_138054007_138057731_138057870_138058048_138058251_138058568_138058734_138059078_138059190_138059653_138059738_138073487_138073605_138074000_138074067_138075818_138075911_138078113_138078259_138096483_138096612_138102710_138102808_138105698_138105808_138112397_138112506_138114377_138114491_138115551_138115680_138117945_138118082_138118651_138118769_138120164_138120373_138120630_138120882_138121468
H1_mix_00088707	chr9	-	2528	10	NNC	ENSG00000181404.17	novel	1873	11	NA	NA	280	-7	intron_retention	FALSE	canonical	2	11	junction_9	67.198067285552	136	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGGATGCAAACGTCTCG	NA	False	NA	33	True	AATAAA	-14	NA	29459	14481	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_14941_15080_15150_15908_16877_16968_17167_17343_17480_17718_17856_18027_18175_18380_18493_24850_25005_29311
H1_mix_00088708	chr9	-	1946	2	NNC	ENSG00000181404.17	novel	556	4	NA	NA	280	1685	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCCTTTGGTTGCCATTC	NA	False	NA	NA	False	NA	NA	NA	29459	23206	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_25005_29311
H1_mix_00088709	chr9	-	487	6	FSM	ENSG00000172785.18	ENST00000462513.5	487	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	650.299930801165	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAACACGTTTCCAAGAAGA	NA	False	NA	-100	True	NA	NA	NA	146154	121502	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_121574_121960_122137_123216_123283_123385_123455_134978_135031_146101
H1_mix_00088711	chr9	-	1690	2	Antisense	novelGene_ENSG00000080503.24_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCATGACAGCTGTTTAAG	NA	False	NA	-7	True	ATTAAA	-23	NA	2175127	2170645	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chr9_-_2172229_2175020
H1_mix_00088712	chr9	-	220	3	Intergenic	novelGene_1514	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_1	10	91	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACCATAGAGTACGAGATG	NA	False	NA	NA	False	NA	NA	NA	2277999	2178158	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_-_2178221_2230580_2230689_2277949
H1_mix_00088713	chr9	-	485	1	FSM	ENSG00000229184.2	ENST00000433885.2	485	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGAGTCCAGGAGGAAGA	NA	False	NA	NA	False	AAAAAG	-40	NA	2900804	2900319	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_2900300_2900800
H1_mix_00088714	chr9	-	869	6	FSM	ENSG00000080298.16	ENST00000449190.5	869	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	8.93084542470644	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAATGGAGAATTCTGGTC	-12	True	NA	NA	False	NA	NA	NA	3526004	3330316	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_3330518_3346666_3346765_3395471_3395597_3488775_3488896_3490278_3490346_3525746
H1_mix_00088715	chr9	-	1199	2	NNC	ENSG00000080298.16	novel	9307	18	NA	NA	-360	-178449	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCAAATGTCTGTGATTC	26	True	NA	NA	False	ATTAAA	-28	NA	3526364	3523180	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_3523762_3525746
H1_mix_00088716	chr9	-	592	5	NNC	ENSG00000106686.17	novel	1444	11	NA	NA	60048	-31	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	3.64005494464026	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCTGTGTCATTAAACAT	9119	False	NA	NA	False	NA	NA	NA	4606259	4598346	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_4598468_4600652_4600810_4604178_4604270_4605346_4605441_4606130
H1_mix_00088717	chr9	-	295	4	FSM	ENSG00000106686.17	ENST00000471669.1	513	4	0	218	0	-218	multi-exon	FALSE	canonical	2	2	junction_1	3.68178700572909	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTTGAATTAATACAGCTA	216	False	NA	NA	False	ATTAAA	-34	NA	4666307	4646516	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_4646529_4656040_4656090_4661898_4662037_4666211
H1_mix_00088718	chr9	-	6145	6	NNC	ENSG00000147853.17	novel	4219	5	NA	NA	-59	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_5	119.83088082794	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCCAGCACTGTGTCAT	742	False	NA	-7	True	AATAAA	-21	NA	4741286	4709555	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_4713097_4718418_4718538_4719134_4719308_4722505_4722626_4726082_4727925_4740936
H1_mix_00088719	chr9	-	622	2	NNC	ENSG00000107014.9	novel	928	2	NA	NA	195	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	0	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTTTGTCTTTTTATTA	479	False	NA	-26	True	ATTAAA	-23	NA	5304237	5299863	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_5300445_5304196
H1_mix_00088720	chr9	-	592	5	FSM	ENSG00000107020.10	ENST00000482696.5	592	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	132.560127866565	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTTTGCTATTTAACAT	-7	True	NA	NA	False	NA	NA	NA	5437867	5361757	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_5361889_5381862_5382032_5431896_5431984_5436568_5436695_5437788
H1_mix_00088722	chr9	-	929	1	FSM	ENSG00000231381.2	ENST00000442955.2	1010	1	-139	220	-139	-220	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGGTTAGCTTTAGAAG	NA	False	NA	NA	False	NA	NA	NA	6670147	6669218	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_6669200_6670100
H1_mix_00088723	chr9	-	4440	17	ISM	ENSG00000107186.17	ENST00000542806.5	2385	20	3864	-2486	0	1261	3prime_fragment	FALSE	canonical	3	119	junction_16	17.2622239297259	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGTGGTACTTTGTTT	4761	False	NA	NA	False	AATAAA	-20	NA	13136181	13104444	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_13107112_13108935_13109060_13109951_13110065_13110635_13110741_13112023_13112147_13113010_13113055_13113930_13114022_13115247_13115335_13119501_13119650_13121738_13121933_13122086_13122171_13123152_13123299_13125215_13125391_13126515_13126591_13126679_13126773_13133823_13133905_13136091
H1_mix_00088724	chr9	-	8667	44	NIC	ENSG00000107186.17	novel	6441	46	NA	NA	-43	1257	combination_of_known_splicesites	FALSE	canonical	2	2	junction_27	31.847238809581	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACAGTTTGTGGTACTTT	4	True	NA	NA	False	AATAAA	-16	NA	13279607	13104448	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_13107112_13108935_13109060_13109951_13110065_13110635_13110741_13112023_13112147_13113010_13113055_13113930_13114022_13115247_13115335_13119501_13119650_13121738_13121933_13122086_13122171_13123152_13123299_13125215_13125391_13126515_13126591_13126679_13126773_13133823_13133905_13136091_13136183_13136711_13136804_13137956_13138154_13139986_13140150_13150510_13150689_13158017_13158111_13162690_13162796_13168365_13168565_13175751_13175876_13176135_13176418_13183417_13183586_13188783_13188994_13190113_13190300_13192130_13192296_13193166_13193314_13196120_13196231_13205035_13205108_13205915_13206100_13216773_13216863_13217179_13217295_13219558_13219769_13221371_13221501_13222232_13222447_13223570_13223711_13224373_13224584_13247634_13247802_13250299_13250373_13279399
H1_mix_00088725	chr9	-	7838	47	NIC	ENSG00000107186.17	novel	7821	47	NA	NA	-46	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_46	32.8761208093458	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCAGCAAGCATTTTTTT	1	True	NA	NA	False	AATAAA	-25	NA	13279610	13105706	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_13107112_13108935_13109060_13109951_13110065_13110635_13110741_13112023_13112147_13113010_13113055_13113930_13114022_13115247_13115335_13119501_13119650_13121738_13121933_13122086_13122171_13123152_13123299_13125215_13125391_13126515_13126591_13126679_13126773_13133823_13133905_13136091_13136183_13136711_13136804_13137956_13138154_13139986_13140150_13147547_13147659_13150510_13150689_13158017_13158111_13162690_13162796_13168365_13168565_13175751_13175876_13176135_13176418_13183417_13183586_13186269_13186387_13188783_13188994_13190113_13190300_13192130_13192296_13193166_13193314_13196120_13196231_13205035_13205108_13205915_13206100_13216773_13216863_13217179_13217295_13219558_13219769_13221371_13221501_13222232_13222447_13223570_13223711_13224373_13224584_13247634_13247802_13250299_13250373_13276573_13276772_13279399
H1_mix_00088726	chr9	-	7405	45	NNC	ENSG00000107186.17	novel	7821	47	NA	NA	42	0	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_20	25.8741391041357	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCAGCAAGCATTTTTTT	35	True	NA	NA	False	AATAAA	-25	NA	13279650	13105706	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_13107112_13108935_13109060_13109951_13110065_13110635_13110741_13112023_13112147_13113010_13113055_13113930_13114022_13115247_13115335_13119501_13119650_13121738_13121933_13122086_13122171_13123152_13123299_13125215_13125391_13126515_13126591_13126679_13126773_13133823_13133905_13136091_13136183_13136711_13136804_13137956_13138154_13139986_13140150_13150510_13150689_13158017_13158111_13162690_13162796_13168365_13168565_13175751_13175876_13176135_13176418_13183417_13183586_13186269_13186387_13188783_13188994_13190113_13190300_13192130_13192296_13193166_13193314_13196120_13196231_13205035_13205108_13205915_13206100_13216773_13216863_13217179_13217295_13219558_13219769_13221371_13221501_13222232_13222447_13223570_13223711_13224373_13224584_13247634_13247802_13250299_13250373_13279563
H1_mix_00088727	chr9	-	7610	45	NIC	ENSG00000107186.17	novel	7821	47	NA	NA	25	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_7	29.8484463928379	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCAGCAAGCATTTTTTT	18	True	NA	NA	False	AATAAA	-25	NA	13279667	13105706	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_13107112_13108935_13109060_13109951_13110065_13110635_13110741_13112023_13112147_13113010_13113055_13113930_13114022_13119501_13119650_13121738_13121933_13122086_13122171_13123152_13123299_13125215_13125391_13126515_13126591_13126679_13126773_13133823_13133905_13136091_13136183_13136711_13136804_13137956_13138154_13139986_13140150_13147547_13147659_13150510_13150689_13158017_13158111_13162690_13162796_13168365_13168565_13175751_13175876_13176135_13176418_13183417_13183586_13186269_13186387_13188783_13188994_13190113_13190300_13192130_13192296_13193166_13193314_13196120_13196231_13205035_13205108_13205915_13206100_13216773_13216863_13217179_13217295_13219558_13219769_13221371_13221501_13222232_13222447_13223570_13223711_13224373_13224584_13247634_13247802_13250299_13250373_13279399
H1_mix_00088728	chr9	-	7638	45	NIC	ENSG00000107186.17	novel	7821	47	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_10	29.8802275069613	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCAGCAAGCATTTTTTT	-7	True	NA	NA	False	AATAAA	-25	NA	13279692	13105706	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_13107112_13108935_13109060_13109951_13110065_13110635_13110741_13112023_13112147_13113010_13113055_13113930_13114022_13115247_13115335_13119501_13119650_13121738_13121933_13123152_13123299_13125215_13125391_13126515_13126591_13126679_13126773_13133823_13133905_13136091_13136183_13136711_13136804_13137956_13138154_13139986_13140150_13147547_13147659_13150510_13150689_13158017_13158111_13162690_13162796_13168365_13168565_13175751_13175876_13176135_13176418_13183417_13183586_13186269_13186387_13188783_13188994_13190113_13190300_13192130_13192296_13193166_13193314_13196120_13196231_13205035_13205108_13205915_13206100_13216773_13216863_13217179_13217295_13219558_13219769_13221371_13221501_13222232_13222447_13223570_13223711_13224373_13224584_13247634_13247802_13250299_13250373_13279399
H1_mix_00088730	chr9	-	3196	1	ISM	ENSG00000147862.18	ENST00000543693.5	7622	11	95759	5	11570	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCCTCATGTTTTATT	4320	False	NA	-1	True	AATAAA	-18	NA	14085043	14081847	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_14081800_14085000
H1_mix_00088731	chr9	-	9138	11	NNC	ENSG00000175893.12	novel	9121	10	NA	NA	-77	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_8	35.7021007785256	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGTTTTTATCCTCTTA	-10	True	NA	0	True	AATAAA	-18	NA	14693342	14611070	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_14619099_14619638_14619683_14639895_14640013_14658748_14658888_14662214_14662327_14672829_14672929_14674186_14674386_14677297_14677405_14680032_14680163_14690336_14690386_14693228
H1_mix_00088733	chr9	-	5648	21	NNC	ENSG00000155158.20	novel	10483	20	NA	NA	-335	56817	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	16.860011862392	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTATAGCATGATCTCGGT	NA	False	NA	NA	False	NA	NA	NA	15307695	15106804	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_15106839_15168825_15172110_15175018_15175136_15177696_15177815_15182306_15182416_15185279_15185407_15186943_15187036_15187970_15188133_15189573_15189634_15189724_15189793_15190553_15190663_15191189_15191256_15192589_15192696_15199860_15199926_15203822_15203891_15210087_15210165_15211265_15211398_15214138_15214250_15225916_15226013_15267913_15267949_15307083
H1_mix_00088734	chr9	-	2382	7	NIC	ENSG00000164985.15	novel	3342	16	NA	NA	0	-1045	combination_of_known_junctions	FALSE	canonical	3	403	junction_6	732.879348111876	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTCTTTTCACTGTTTG	-7	True	NA	45	True	NA	NA	NA	15472750	15465110	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_15465581_15466747_15466860_15468629_15468844_15468956_15469059_15469265_15469337_15469937_15471232_15472631
H1_mix_00088735	chr9	-	774	3	FSM	ENSG00000147872.10	ENST00000464326.1	790	3	0	16	0	-16	multi-exon	FALSE	canonical	2	4	junction_1	148.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGGGCTGTATAATCTT	9043	False	NA	NA	False	ATTAAA	-28	NA	19118446	19108390	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_19108748_19116358_19116650_19118320
H1_mix_00088737	chr9	-	759	5	Fusion	ENSG00000232176.1_ENSG00000137154.13	novel	892	2	NA	NA	0	-26	multi-exon	TRUE	canonical	3	8241	junction_1	7037.09554343978	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTTCTAAGTGAGTAAAAA	-2	True	NA	NA	False	NA	NA	NA	19380236	19200360	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr9_-_19200583_19378367_19378515_19378707_19378919_19379486_19379619_19380189
H1_mix_00088739	chr9	-	879	6	NNC	ENSG00000137154.13	novel	1369	6	NA	NA	-83	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_5	11971.6653912478	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTGACTTTTCATTG	NA	False	NA	-16	True	AATAAA	-17	NA	19380319	19376254	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_19376389_19376493_19376652_19378707_19378919_19379486_19379619_19379761_19379876_19380189
H1_mix_00088740	chr9	-	1217	6	NNC	ENSG00000137154.13	novel	1369	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_5	10964.7001855956	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCAGACTCTGATCTCT	-2	True	NA	-31	True	AATAAA	-2	NA	19380236	19376269	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_19376389_19376493_19376652_19378392_19378515_19378707_19378919_19379486_19379619_19379761
H1_mix_00088741	chr9	-	3884	10	FSM	ENSG00000155886.12	ENST00000286344.4	10899	10	-35	7050	8	-7047	multi-exon	FALSE	canonical	1	3	junction_2	2.98556196500987	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAATCAATGGAAAACTAT	194	False	NA	NA	False	AATAAA	-28	NA	19789029	19514501	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_19516403_19520893_19521061_19528048_19528139_19550136_19550269_19573350_19573470_19576923_19577023_19619583_19619693_19622260_19622300_19785936_19787020_19788884
H1_mix_00088742	chr9	-	567	2	Genic_Genomic	ENSG00000198642.7	novel	5740	1	NA	NA	8	5610	multi-exon	FALSE	canonical	3	25	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCACTGAGTTTTTGATT	-12	True	NA	-7	True	AATAAA	-14	NA	21335396	21324054	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_-_21324322_21335096
H1_mix_00088743	chr9	-	2167	1	FSM	ENSG00000184995.7	ENST00000448696.4	1475	1	-705	13	-705	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTCTTCAAATGGGTGT	8063	False	NA	NA	False	AATAAA	-14	NA	21483018	21480851	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_21480900_21483000
H1_mix_00088744	chr9	-	762	1	FSM	ENSG00000229298.1	ENST00000447235.1	727	1	54	-89	54	89	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGCGCTTGCTGTTGTG	NA	False	NA	NA	False	NA	NA	NA	21812293	21811531	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_21811500_21812300
H1_mix_00088745	chr9	-	1011	1	FSM	ENSG00000265194.1	ENST00000581788.1	3017	1	2303	-297	2303	297	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATCCTCAGGTGCTGTTT	NA	False	NA	NA	False	NA	NA	NA	21859623	21858612	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_21858600_21859600
H1_mix_00088746	chr9	-	1069	1	FSM	ENSG00000147883.12	ENST00000579591.1	1069	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATGAGGTGGTGGAGTGG	3040	False	NA	NA	False	NA	NA	NA	22006271	22005202	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_22005200_22006300
H1_mix_00088747	chr9	-	1489	6	NNC	ENSG00000107105.15	novel	3691	8	NA	NA	-984	-383	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_5	35.0690746955206	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCAGTTGGTTGTGTCT	3532	False	NA	NA	False	AGTAAA	-22	NA	23822832	23692193	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_23692888_23701378_23701605_23704917_23705072_23731021_23731126_23762005_23762250_23822765
H1_mix_00088748	chr9	-	351	1	FSM	ENSG00000232466.1	ENST00000444762.1	372	1	7	14	7	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGCCAAAAGACACCCCG	NA	False	NA	NA	False	NA	NA	NA	26880542	26880191	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_26880200_26880500
H1_mix_00088750	chr9	-	4123	4	NNC	ENSG00000197579.8	novel	4131	3	NA	NA	0	55015	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	121.661643731932	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAGTTAGACCTACACCAT	51	False	NA	NA	False	AAAAAG	-3	NA	32552553	32485528	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_32485556_32540545_32544327_32550773_32550969_32552433
H1_mix_00088752	chr9	-	1928	9	FSM	ENSG00000137074.20	ENST00000465003.6	1914	9	0	-14	0	0	multi-exon	FALSE	canonical	3	11	junction_8	154.038905394059	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTTTTTGGGATAATAT	24	True	NA	1	True	AATAAA	-24	NA	33001583	32972605	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988082_32988125_32989758_32989896_32997242_32997349_33001566
H1_mix_00088753	chr9	-	1859	7	FSM	ENSG00000137074.20	ENST00000436040.7	1846	7	0	-13	0	0	multi-exon	FALSE	canonical	2	10	junction_6	161.042437471204	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTTTTTGGGATAATAT	-1	True	NA	1	True	AATAAA	-24	NA	33025118	32972605	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32989758_32989896_33025022
H1_mix_00088754	chr9	-	2072	8	NIC	ENSG00000137074.20	novel	2023	8	NA	NA	-4	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	173.110086479143	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTTGTTTTTTGGGATA	3	True	NA	-3	True	AATAAA	-20	NA	33025114	32972609	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_32973689_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082_32988130_32989758_32989896_33024999
H1_mix_00088755	chr9	-	1826	8	NIC	ENSG00000137074.20	novel	1977	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	103	junction_5	115.212137965988	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAATAAATTTGGATAAAAC	-6	True	NA	-30	True	AAAAAG	-32	NA	33001613	32972636	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988082_32988130_32989758_32989896_33001566
H1_mix_00088756	chr9	-	1087	7	NIC	ENSG00000137074.20	novel	1742	7	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	171.884328029702	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTCTATTATTGAGTGG	34	True	NA	-11	True	ATTAAA	-21	NA	33001573	32973375	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_32973689_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32989758_32989896_33001515
H1_mix_00088757	chr9	-	1135	7	NIC	ENSG00000137074.20	novel	1348	8	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_5	136.266589204153	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTCTATTATTGAGTGG	14	True	NA	-11	True	ATTAAA	-21	NA	33001593	32973375	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32989758_32989896_33001566
H1_mix_00088758	chr9	-	1113	8	NIC	ENSG00000137074.20	novel	1184	9	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_7	145.205132871551	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTCTATTATTGAGTGG	22	True	NA	-11	True	ATTAAA	-21	NA	33025095	32973375	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988082_32988130_32989758_32989896_33025022
H1_mix_00088760	chr9	-	660	1	FSM	ENSG00000225693.1	ENST00000425356.1	484	1	12	-188	12	188	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAGAAAAAAGAAAAA	7914	False	NA	NA	False	AATAAA	-13	NA	33020153	33019493	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_33019500_33020200
H1_mix_00088761	chr9	-	4074	26	NIC	ENSG00000137073.24	novel	4275	29	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	3	30	junction_18	82.9384928727307	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGGTCTCTGTGTGGTGT	283	False	NA	-8	True	AATAAA	-14	NA	34048914	33921693	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_33922600_33922686_33922879_33922965_33923034_33923185_33923294_33923378_33923479_33923794_33924001_33924205_33924285_33926616_33926665_33926988_33927081_33927796_33927993_33932561_33932629_33933489_33933629_33935838_33935879_33941648_33941863_33943419_33943590_33944364_33944640_33948373_33948588_33953284_33953475_33960825_33960879_33963725_33963792_33986759_33986838_33988972_33989127_33996222_33996334_33998786_33998865_34017049_34017190_34048824
H1_mix_00088767	chr9	-	384	1	Genic_Genomic	ENSG00000279336.1	novel	NA	NA	NA	NA	-155	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCATGAGTCATGCCCAG	NA	False	NA	NA	False	NA	NA	NA	34201670	34201286	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chr9_-_34201300_34201700
H1_mix_00088768	chr9	-	1463	3	FSM	ENSG00000147955.18	ENST00000680730.1	1457	3	0	-6	0	0	multi-exon	FALSE	canonical	2	11	junction_1	626	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACACACATATCACAGTTT	11	False	NA	-115	True	NA	NA	NA	34637809	34634812	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_34635859_34637266_34637421_34637546
H1_mix_00088769	chr9	-	512	2	FSM	ENSG00000286782.1	ENST00000662507.1	1999	2	1138	349	1138	-349	multi-exon	FALSE	canonical	1	1	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATGTGAAAGGAAAATAA	NA	False	NA	NA	False	AAAAAG	-9	NA	35014938	35013311	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35013650_35014764
H1_mix_00088771	chr9	-	5506	14	FSM	ENSG00000165280.18	ENST00000679599.1	5506	14	0	0	0	0	multi-exon	FALSE	canonical	2	1877	junction_2	366.873775110603	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTCTAAACCAAAAAATGAC	-12	True	NA	-73	True	NA	NA	NA	35072623	35056620	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35057223_35057375_35059220_35059492_35060924_35061014_35061180_35061576_35061690_35062002_35062139_35062216_35062351_35062977_35063081_35064153_35064286_35065250_35065382_35066674_35066818_35067890_35068064_35068250_35068363_35072336
H1_mix_00088774	chr9	-	677	3	Intergenic	novelGene_1545	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_2	3	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTCTGGTGATCTCTTC	NA	False	NA	3	True	ATTAAA	-22	NA	35161160	35151260	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_-_35151604_35156095_35156303_35161033
H1_mix_00088775	chr9	-	270	1	FSM	ENSG00000288586.1	ENST00000673624.1	1703	1	1199	234	1199	-234	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTCGCAATCCTTCCACA	287	False	NA	NA	False	NA	NA	NA	35603940	35603670	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_35603700_35603900
H1_mix_00088776	chr9	-	2119	11	ISM	ENSG00000159921.20	ENST00000642385.2	5263	12	-29	3755	-29	-1007	5prime_fragment	FALSE	canonical	2	7	junction_4	4.4328320518603	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCTAAGAACAGGTGAGCA	1	True	NA	NA	False	NA	NA	NA	36258477	36218195	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_36218300_36219837_36220021_36222776_36222999_36223372_36223503_36227247_36227459_36229020_36229109_36233919_36234133_36236831_36236985_36246030_36246483_36249191_36249398_36258320
H1_mix_00088778	chr9	-	5928	2	NNC	ENSG00000168795.5	novel	4690	2	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTTCTTTTTCTTTAC	3435	False	NA	0	True	AATAAA	-27	NA	37465397	37438101	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_37442556_37463923
H1_mix_00088779	chr9	-	503	1	FSM	ENSG00000233111.1	ENST00000409159.2	606	1	-30	133	-30	-133	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGCAGGCGTTCATGACCA	26	False	NA	NA	False	NA	NA	NA	37637323	37636820	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_37636800_37637300
H1_mix_00088780	chr9	-	1625	4	FSM	ENSG00000107371.14	ENST00000465229.5	1625	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	292.376849668749	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACTCTGCTCCCGTAGAT	0	True	NA	NA	False	NA	NA	NA	37785061	37766977	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_37767506_37780274_37780881_37783913_37784064_37784720
H1_mix_00088781	chr9	-	1535	1	FSM	ENSG00000225345.3	ENST00000565670.1	1750	1	-202	417	0	-417	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGAGCCAATTAAACCTCT	NA	False	NA	NA	False	NA	NA	NA	38568211	38566676	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_38566700_38568200
H1_mix_00088782	chr9	-	2604	2	FSM	ENSG00000278175.5	ENST00000660231.2	2612	2	22	-14	0	5	multi-exon	FALSE	canonical	3	42	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	39810094	39807375	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_39809616_39809730
H1_mix_00088783	chr9	-	748	2	NNC	ENSG00000284116.1	novel	1066	4	NA	NA	25	-107852	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGATACCATTTCCAGTG	35	False	NA	NA	False	AATAAA	-22	NA	40106586	40091644	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_40092164_40106357
H1_mix_00088784	chr9	-	1141	13	NIC	ENSG00000215126.11	novel	1813	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_7	386.478645018784	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTCAAGCATTTATTTA	42	False	NA	NA	False	AATAAA	-19	NA	41189301	41131676	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_41131841_41132227_41132358_41133504_41133571_41133673_41133743_41145280_41145333_41156382_41156440_41162332_41162378_41166783_41166831_41172711_41172750_41182374_41182467_41183563_41183661_41185992_41186080_41189104
H1_mix_00088788	chr9	-	682	1	FSM	ENSG00000232815.1	ENST00000455245.1	715	1	30	3	30	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCAGGTTGGGGCGGGTTT	NA	False	NA	NA	False	NA	NA	NA	63818432	63817750	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_63817800_63818400
H1_mix_00088789	chr9	-	587	6	NNC	ENSG00000204778.4	novel	655	9	NA	NA	16458	59	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_5	681.727628895881	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATATTTCAAGCATTTAT	NA	False	NA	NA	False	AATAAA	-16	NA	65306557	65287854	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_65288016_65288402_65288533_65289657_65289724_65289826_65289896_65301424_65301477_65306448
H1_mix_00088790	chr9	-	911	5	NIC	ENSG00000204778.4	novel	655	9	NA	NA	9882	59	combination_of_known_splicesites	FALSE	canonical	3	59	junction_1	585.74071695589	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATATTTCAAGCATTTAT	NA	False	NA	NA	False	AATAAA	-16	NA	65313133	65287854	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_65288016_65289657_65289724_65289826_65289896_65301424_65301477_65312570
H1_mix_00088791	chr9	-	1220	7	NNC	ENSG00000204778.4	novel	655	9	NA	NA	8002	59	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	683.531515976647	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATATTTCAAGCATTTAT	NA	False	NA	NA	False	AATAAA	-16	NA	65315013	65287854	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_65288016_65288402_65288579_65289657_65289724_65289826_65289896_65301424_65301477_65312570_65312628_65314374
H1_mix_00088792	chr9	-	888	1	FSM	ENSG00000279706.1	ENST00000624487.1	1188	1	433	-133	433	133	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAAAGTGCTGGGATTAC	NA	False	NA	NA	False	NA	NA	NA	68251223	68250335	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_68250300_68251200
H1_mix_00088793	chr9	-	700	4	FSM	ENSG00000278910.5	ENST00000624238.3	764	4	54	10	39	-6	multi-exon	FALSE	canonical	0	0	junction_2	2.16024689946929	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCTGTTTTACTGTGCA	4036	False	NA	NA	False	AATAAA	-14	NA	69307088	69296687	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_69296868_69304935_69305078_69306147_69306291_69306853
H1_mix_00088794	chr9	-	704	2	FSM	ENSG00000268364.3	ENST00000656832.2	1289	2	582	3	526	-3	multi-exon	FALSE	canonical	3	9	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACATGCAAATTAAATGGT	1012	False	NA	NA	False	AATAAA	-14	NA	70258284	70216087	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_70216422_70257914
H1_mix_00088795	chr9	-	4832	18	ISM	ENSG00000083067.24	ENST00000396292.8	4740	24	76575	13511	76575	-13511	internal_fragment	FALSE	canonical	2	4	junction_3	5.78926341897275	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAAAACAGAGATCTTTTG	7119	False	NA	NA	False	NA	NA	NA	70786335	70549463	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_70549675_70552843_70553044_70553159_70553311_70591030_70591206_70598418_70598671_70603341_70603471_70610608_70610750_70615907_70616076_70618866_70619096_70620075_70620366_70621243_70621274_70625190_70625332_70635210_70635262_70639059_70639195_70640559_70640661_70681505_70681579_70761600_70761725_70784104
H1_mix_00088797	chr9	-	1228	7	FSM	ENSG00000083067.24	ENST00000361823.9	1260	7	33	-1	27	1	multi-exon	FALSE	canonical	0	0	junction_6	16.2112786527021	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCATAGGCTGTGGTCT	85	False	NA	-1	True	AATAAA	-20	NA	70868996	70783858	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_70784280_70827846_70828019_70843002_70843128_70846377_70846592_70862907_70863113_70864431_70864512_70868985
H1_mix_00088798	chr9	-	5322	6	FSM	ENSG00000107372.13	ENST00000237937.7	5310	6	0	-12	0	0	multi-exon	FALSE	canonical	1	2	junction_5	351.023076164517	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGTAAGACTCCATTTT	6753	False	NA	-26	True	AATAAA	-32	NA	72364592	72351412	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_72356102_72356930_72357057_72359417_72359522_72360109_72360222_72360627_72360788_72364461
H1_mix_00088799	chr9	-	817	2	FSM	ENSG00000106733.21	ENST00000482537.1	817	2	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTGGAATTCATTGTG	NA	False	NA	-1	True	AATAAA	-19	NA	75067205	75061199	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_75061568_75066756
H1_mix_00088800	chr9	-	929	4	FSM	ENSG00000135002.12	ENST00000483155.5	962	4	33	0	33	0	multi-exon	FALSE	canonical	1	4	junction_3	76.7115810465843	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGTAATCCCAGCACTTTG	593	False	NA	NA	False	AGTAAA	-30	NA	76393924	76386980	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_76387530_76388553_76388657_76392417_76392570_76393799
H1_mix_00088801	chr9	-	880	6	FSM	ENSG00000106772.19	ENST00000492157.5	1264	6	0	384	0	-384	multi-exon	FALSE	canonical	1	4	junction_2	3.00665927567458	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGGTGGGAATGCTTTT	219	False	NA	NA	False	AATAAA	-35	NA	76906087	76823631	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_76823727_76826579_76826733_76846514_76846679_76850462_76850666_76854103_76854209_76905927
H1_mix_00088802	chr9	-	414	1	Intergenic	novelGene_1565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	268	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTAAGGTGGGGCAGGGC	NA	False	NA	NA	False	NA	NA	NA	80137832	80137418	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_-_80137400_80137800
H1_mix_00088803	chr9	-	4609	1	Intergenic	novelGene_1566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGGAGCATGGAAATAAGG	NA	False	NA	NA	False	NA	NA	NA	80143106	80138497	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_-_80138500_80143100
H1_mix_00088805	chr9	-	4129	20	NNC	ENSG00000196781.16	novel	4135	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_14	175.458370815406	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTTCCTTTTCTTTCT	-2	True	NA	79	True	AGTAAA	-18	NA	81689547	81583682	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_81584306_81584447_81584525_81585504_81585656_81587680_81587829_81590804_81591053_81593024_81593275_81610219_81610297_81611768_81611957_81613376_81613522_81615981_81616135_81616645_81616700_81620440_81620558_81633347_81633365_81634096_81634299_81652213_81652289_81653973_81654037_81685675_81685721_81685832_81685897_81687333_81687435_81688216
H1_mix_00088807	chr9	-	219	1	FSM	ENSG00000233309.1	ENST00000432491.1	726	1	348	159	348	-159	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTGTTCTAAACAAACAACA	NA	False	NA	53	True	AATACA	-12	NA	82744444	82744225	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_82744200_82744400
H1_mix_00088809	chr9	-	562	3	FSM	ENSG00000135018.14	ENST00000527373.1	562	3	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_1	26	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACTGGAACAACTCAGTG	8152	False	NA	NA	False	NA	NA	NA	83665393	83661910	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_83661940_83663874_83664044_83665029
H1_mix_00088810	chr9	-	2456	4	FSM	ENSG00000165118.15	ENST00000376344.8	2468	4	12	0	12	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGAATGGATTATTTCAT	15	True	NA	NA	False	AATAAA	-23	NA	83956730	83938310	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_83939744_83944793_83944990_83955380_83955641_83956163
H1_mix_00088812	chr9	-	4478	25	FSM	ENSG00000135049.16	ENST00000337006.8	4473	25	0	-5	0	4	multi-exon	FALSE	canonical	3	7	junction_24	52.5218043345386	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCATCTTCTTTAACC	NA	False	NA	1	True	AATAAA	-24	NA	85742029	85546534	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_85547287_85575314_85575476_85578919_85579097_85585462_85585595_85586830_85586961_85588297_85588479_85589527_85589682_85592559_85592705_85596361_85596450_85618982_85619132_85619214_85619302_85621201_85621286_85632661_85633375_85642826_85642944_85646320_85646419_85655142_85655321_85657434_85657644_85660935_85660974_85669484_85669579_85672549_85672682_85677435_85677583_85678334_85678399_85681267_85681336_85692688_85692814_85741774
H1_mix_00088813	chr9	-	499	2	NNC	ENSG00000269994.3	novel	2028	2	NA	NA	13	2235	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTTGGGATTGTTACAAG	NA	False	NA	NA	False	AATAAA	-18	NA	87042113	87006204	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_87006461_87041870
H1_mix_00088814	chr9	-	484	1	FSM	ENSG00000275017.1	ENST00000622148.1	471	1	-213	200	-213	-200	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGAAGTATGGCAAAATT	NA	False	NA	NA	False	NA	NA	NA	88392045	88391561	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_88391600_88392000
H1_mix_00088815	chr9	-	1837	3	FSM	ENSG00000187764.12	ENST00000420101.6	1837	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	2.5	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTCTCATGAGTGTTT	9034	False	NA	-1	True	ATTAAA	-15	NA	89364651	89361600	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_89362429_89363429_89363528_89363740
H1_mix_00088816	chr9	-	3053	2	FSM	ENSG00000187764.12	ENST00000475255.5	3053	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTCTCATGAGTGTTT	8031	False	NA	-1	True	ATTAAA	-15	NA	89365654	89361600	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_89362429_89363429
H1_mix_00088817	chr9	-	1856	3	FSM	ENSG00000285907.1	ENST00000649503.1	1856	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTATAAGTGATTTTTAA	NA	False	NA	NA	False	TATAAA	-40	NA	89604297	89599430	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_89600816_89602739_89602862_89603948
H1_mix_00088818	chr9	-	367	2	FSM	ENSG00000169071.15	ENST00000493846.1	370	2	0	3	0	-3	multi-exon	FALSE	canonical	3	6	junction_1	0	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAATGATGAGTTATTG	3778	False	NA	NA	False	ATTAAA	-18	NA	91948715	91923670	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_91923929_91948606
H1_mix_00088819	chr9	-	4537	33	FSM	ENSG00000196305.19	ENST00000683192.1	4537	33	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_29	453.271127299931	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTAGACATCTAATAAAACT	3	True	NA	-34	True	CATAAA	-33	NA	92293695	92210237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92287790_92287911_92288125_92288283_92289300_92289427_92293440
H1_mix_00088823	chr9	-	4457	18	NNC	ENSG00000198000.12	novel	4053	18	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	1	8	junction_14	56.8992918388683	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCAGCCTAGGCTTTGT	302	False	NA	-14	True	AATAAA	-19	NA	92325292	92297483	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_92297887_92298256_92298337_92298883_92298955_92299889_92300017_92301550_92301823_92305752_92305831_92306885_92307025_92310170_92310262_92310552_92310676_92311145_92311260_92314266_92316137_92318615_92318687_92319220_92319357_92319942_92320383_92321667_92321747_92323440_92323504_92324022_92324210_92325179
H1_mix_00088825	chr9	-	1634	1	FSM	ENSG00000275318.1	ENST00000617319.1	734	1	-38	-862	-38	862	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCGCACTACAAGTAGCTG	NA	False	NA	NA	False	TATAAA	-9	NA	92841726	92840092	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_92840100_92841700
H1_mix_00088826	chr9	-	1231	5	NNC	ENSG00000131669.10	novel	861	5	NA	NA	0	66173	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	155.557666156316	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCAAAACATATGGGCTTCC	2062	False	NA	NA	False	NA	NA	NA	93134219	93055322	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_93055349_93121495_93122231_93124898_93125063_93126409_93126639_93134142
H1_mix_00088827	chr9	-	2001	2	FSM	ENSG00000131669.10	ENST00000489274.1	2026	2	25	0	25	0	multi-exon	FALSE	canonical	3	377	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCCATCTCCCTGTTCC	8427	False	NA	-29	True	AATAAA	-24	NA	93126165	93121496	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_93122231_93124898
H1_mix_00088828	chr9	-	1134	7	NIC	ENSG00000165140.12	novel	1487	8	NA	NA	54	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_6	3.53160335006952	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTCCCTTGCTTTGTGTC	202	False	NA	NA	False	AATAAA	-21	NA	94640083	94603133	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_94603573_94605456_94605577_94606814_94606953_94609920_94610062_94617767_94617861_94620328_94620492_94640043
H1_mix_00088829	chr9	-	3868	6	NNC	ENSG00000165244.7	novel	3687	5	NA	NA	-154	35593	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28.1183214292745	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGAAAATTAGCCTGGC	NA	False	NA	NA	False	NA	NA	NA	96418524	96350347	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_96350375_96385940_96388460_96392397_96392537_96394822_96394943_96398163_96398315_96417612
H1_mix_00088831	chr9	-	2514	4	FSM	ENSG00000158122.12	ENST00000411939.5	2514	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	17.6131264181639	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTTTGTGCTTTTTTTAT	603	False	NA	NA	False	AATAAA	-21	NA	96654748	96639576	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_96641887_96651389_96651496_96651658_96651713_96654704
H1_mix_00088832	chr9	-	6987	8	Fusion	ENSG00000196597.13_ENSG00000081386.13	novel	6507	6	NA	NA	54	0	multi-exon	FALSE	canonical	1	2	junction_6	19.5802899647079	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATGTCTACACATTTAAT	51	False	NA	-3	True	AATAAA	-20	NA	96854460	96754552	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr9_-_96760478_96763117_96763214_96763505_96763633_96774787_96774847_96775999_96776246_96827079_96827182_96851946_96852006_96854087
H1_mix_00088833	chr9	-	4402	6	FSM	ENSG00000196597.13	ENST00000481138.6	4442	6	0	40	0	-40	multi-exon	FALSE	canonical	2	9	junction_5	12.9522198869537	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGCCACATGAATATTAAT	-3	True	NA	NA	False	NA	NA	NA	96854514	96816308	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_96819779_96827079_96827182_96844889_96845017_96851946_96852006_96852852_96853070_96854087
H1_mix_00088834	chr9	-	3076	6	ISM	ENSG00000196312.15	ENST00000647176.1	9746	7	-110	8677	-77	1867	5prime_fragment	FALSE	canonical	3	12	junction_1	195.552959578729	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCTTCACAGGCTAAATA	NA	False	NA	NA	False	NA	NA	NA	97013785	96896049	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_96898128_96918642_96918827_96949554_96949683_96958834_96958898_96972852_96972949_97013258
H1_mix_00088835	chr9	-	5832	6	NNC	ENSG00000196312.15	novel	1246	8	NA	NA	-77	821	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	196.800813006451	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCTGGGCAACAAGAGTGA	NA	False	NA	NA	False	NA	NA	NA	97013785	96932700	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_96933916_96942602_96946406_96949554_96949683_96958834_96958898_96972852_96972949_97013258
H1_mix_00088836	chr9	-	5553	13	Fusion	ENSG00000136943.12_ENSG00000159712.10	novel	2980	16	NA	NA	23855	871	intron_retention	FALSE	canonical	2	6	junction_8	11.9338454266287	62	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGAGTTGGAGCCACTG	NA	False	NA	NA	False	NA	NA	NA	97197380	97155698	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr9_-_97156586_97160181_97160403_97161754_97161967_97170606_97170737_97172947_97173061_97178263_97178414_97179447_97180917_97185441_97185516_97187453_97187508_97188464_97188600_97191730_97191799_97194702_97194841_97195478
H1_mix_00088837	chr9	-	228	2	NNC	ENSG00000203279.5	novel	484	3	NA	NA	193	2931	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGTGAGTTTTTAAAAGA	233	False	NA	NA	False	TTTAAA	-16	NA	97238485	97234818	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_97234984_97238422
H1_mix_00088838	chr9	-	1142	2	FSM	ENSG00000286375.1	ENST00000667253.1	1133	2	0	-9	0	9	multi-exon	FALSE	canonical	0	0	junction_1	0	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTTTCTCATCAGAAACC	646	False	NA	NA	False	NA	NA	NA	97411908	97403699	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_97404791_97411857
H1_mix_00088839	chr9	-	1922	2	FSM	ENSG00000136932.15	ENST00000375118.1	2971	2	1049	0	1049	0	multi-exon	FALSE	canonical	3	18	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAATGCTTTTTGATCTG	NA	False	NA	-3	True	AATAAA	-33	NA	97911422	97904533	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_97904993_97909959
H1_mix_00088840	chr9	-	1345	4	NIC	ENSG00000136932.15	novel	1577	5	NA	NA	0	-12	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	4.10960933531265	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAGAGAAATCACCAAATG	12	True	NA	-15	True	AATAAA	-21	NA	97922500	97904545	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_97904993_97909959_97910617_97913400_97913559_97922417
H1_mix_00088844	chr9	-	3885	16	NIC	ENSG00000165138.18	novel	7190	15	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	99	junction_1	134.149071309992	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCCCACTTTGACTACAT	-11	True	NA	-7	True	ATTAAA	-14	NA	98796539	98731327	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_98732554_98736526_98736624_98745558_98745676_98751028_98751097_98756419_98756607_98768080_98768251_98770895_98771047_98773876_98774081_98777404_98777455_98778225_98778425_98780188_98780338_98782466_98782574_98783952_98784158_98784831_98784877_98790103_98790607_98796132
H1_mix_00088845	chr9	-	2692	15	NIC	ENSG00000165138.18	novel	7190	15	NA	NA	36	-1	combination_of_known_splicesites	FALSE	canonical	3	65	junction_1	135.438761672076	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGCTTGCAGAAGGAATC	25	True	NA	-16	True	AATAAA	-22	NA	98796503	98732009	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_98732554_98736495_98736624_98745558_98745676_98751028_98751097_98756419_98756604_98768080_98768251_98770895_98771047_98773876_98774081_98777404_98777455_98778225_98778425_98780188_98780338_98782466_98782574_98783952_98784158_98784831_98784877_98796132
H1_mix_00088846	chr9	-	1930	2	FSM	ENSG00000285706.1	ENST00000647710.1	1938	2	26	-18	26	18	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGATGTGCTGCTGGA	NA	False	NA	NA	False	AATAAA	-25	NA	98807538	98798447	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_98799610_98806770
H1_mix_00088847	chr9	-	349	1	FSM	ENSG00000240235.3	ENST00000469816.3	280	1	-70	1	-70	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCGTCTCTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99185936	99185587	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_99185600_99185900
H1_mix_00088848	chr9	-	1728	2	FSM	ENSG00000119523.10	ENST00000319033.7	1627	2	-101	0	-101	0	multi-exon	FALSE	canonical	3	42	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAAAAAGAAACAGTATTA	740	False	NA	42	True	AATAAA	-12	NA	99221241	99217371	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_99218837_99220978
H1_mix_00088849	chr9	-	260	1	FSM	ENSG00000271086.7	ENST00000603491.1	928	1	662	6	662	1	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAATCTTTGTGTAGACA	NA	False	NA	NA	False	AATAAA	-20	NA	99355602	99355342	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_99355300_99355600
H1_mix_00088850	chr9	-	303	3	ISM	ENSG00000237461.2	ENST00000427039.1	1544	7	16	132373	16	-132373	5prime_fragment	FALSE	canonical	0	0	junction_1	1	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACATGGATGAGGGAGGC	17	True	NA	NA	False	NA	NA	NA	99819873	99718158	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_99718288_99805870_99805992_99819820
H1_mix_00088851	chr9	-	6004	1	Intergenic	novelGene_1590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGTCTCTTTACACAGAC	NA	False	NA	8	True	AATAAA	-30	NA	100146213	100140209	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_-_100140200_100146200
H1_mix_00088852	chr9	-	1032	3	NNC	ENSG00000136897.8	novel	3336	2	NA	NA	0	35677	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	612	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGGCTTCATTGCAAAAT	-9	True	NA	NA	False	AAAAAG	-1	NA	101398618	101351955	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_101351988_101389968_101390851_101398500
H1_mix_00088853	chr9	-	1600	1	FSM	ENSG00000270332.3	ENST00000603949.1	672	1	-930	2	-930	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGTGTTAAGACAGACT	NA	False	NA	NA	False	AATAAA	-19	NA	104094003	104092403	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_104092400_104094000
H1_mix_00088854	chr9	-	682	5	FSM	ENSG00000165029.17	ENST00000374733.1	923	5	0	241	0	-241	multi-exon	FALSE	canonical	0	0	junction_4	8.16624148553054	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCTGATGCCTCCAGCT	15	False	NA	NA	False	NA	NA	NA	104928139	104861678	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_104861801_104883038_104883158_104884426_104884569_104889101_104889196_104927934
H1_mix_00088855	chr9	-	7231	35	FSM	ENSG00000070061.16	ENST00000675748.1	7210	35	0	-21	0	0	multi-exon	FALSE	canonical	3	70	junction_34	38.1563098220826	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTGAATTTTCCTGGAC	4	True	NA	NA	False	AGTAAA	-16	NA	108934096	108867516	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_108869183_108874894_108874971_108877994_108878150_108878622_108878751_108879445_108879558_108880051_108880166_108881704_108881766_108882124_108882188_108889331_108889394_108891202_108891405_108892985_108893084_108893942_108894067_108896495_108896645_108896952_108897039_108897147_108897286_108898501_108898582_108898670_108898750_108899821_108899896_108900259_108900376_108901424_108901531_108901627_108901682_108902838_108902943_108903562_108903670_108906302_108906486_108908304_108908405_108911009_108911181_108912263_108912495_108916203_108916298_108917546_108919350_108922841_108922928_108926522_108926604_108927371_108927454_108929768_108929922_108930996_108931057_108933863
H1_mix_00088857	chr9	-	7712	16	NIC	ENSG00000106771.13	novel	7999	18	NA	NA	12	-17	combination_of_known_splicesites	FALSE	canonical	3	31	junction_12	66.0341325881295	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGTGGTAAACTTAATCT	10	True	NA	-15	True	AATAAA	-20	NA	109119935	109015151	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_109020506_109033306_109033502_109036205_109036381_109038016_109038118_109050282_109050429_109050569_109050693_109057190_109057323_109060353_109060453_109064476_109064568_109073355_109073439_109080838_109080944_109087172_109087343_109093474_109093592_109106507_109106610_109108452_109108571_109119334
H1_mix_00088858	chr9	-	6542	25	NIC	ENSG00000070159.14	novel	6704	26	NA	NA	18	-9	combination_of_known_junctions	FALSE	canonical	3	7	junction_13	6.90410505906933	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGCAACACTGTTATTG	-5	True	NA	NA	False	TATAAA	-10	NA	109498289	109375708	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_109379634_109381651_109381788_109382301_109382448_109383422_109383552_109389232_109389380_109391137_109391200_109391470_109391562_109404447_109404609_109406461_109406619_109408320_109408378_109409998_109410077_109410228_109410416_109420423_109420601_109426949_109427123_109428620_109428685_109433072_109433162_109436882_109436971_109438113_109438235_109445239_109445293_109448810_109448856_109454495_109454575_109457172_109457216_109457291_109457400_109463296_109463452_109498218
H1_mix_00088859	chr9	-	580	1	FSM	ENSG00000228053.1	ENST00000418441.1	478	1	-94	-8	-94	8	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAATAAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	110025452	110024872	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_110024900_110025500
H1_mix_00088860	chr9	-	559	6	NNC	ENSG00000136810.13	novel	737	5	NA	NA	0	67205	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3237.03324666275	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAAACTTATGTTATTGT	0	True	NA	NA	False	NA	NA	NA	110256507	110176604	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_110176633_110244015_110244220_110244777_110244844_110250819_110250880_110251357_110251463_110256411
H1_mix_00088861	chr9	-	3725	5	NIC	ENSG00000198121.15	novel	3818	6	NA	NA	1	0	combination_of_known_junctions	TRUE	canonical	2	6	junction_4	8.61321658847611	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTTTGGTAATGTGTGGTT	6	True	NA	-9	True	AATAAA	-14	NA	111038457	110873262	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_110875723_110941420_110942169_110972072_110972221_110973480_110973559_111038166
H1_mix_00088862	chr9	-	461	5	FSM	ENSG00000106853.20	ENST00000422125.1	461	5	0	0	0	0	multi-exon	FALSE	canonical	1	17	junction_2	499.894488867401	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGGGTGGAGAAACAGTG	169	False	NA	NA	False	NA	NA	NA	111599695	111583551	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_111583590_111585997_111586166_111594221_111594268_111597316_111597433_111599602
H1_mix_00088865	chr9	-	2685	7	NNC	ENSG00000228623.7	novel	2414	5	NA	NA	15	-4016	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	27.1216395767906	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGATGGCATGATCTCAGCT	-13	True	NA	NA	False	NA	NA	NA	113012212	112968913	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_112968942_112969339_112969381_112996902_112999139_112999664_112999815_113001993_113002074_113011140_113011228_113012149
H1_mix_00088866	chr9	-	343	4	NIC	ENSG00000228623.7	novel	2414	5	NA	NA	11	660	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	26.2339898266013	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCACATTAGAAGAACTCGA	17	True	NA	NA	False	NA	NA	NA	113012182	112998995	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_112999139_113001993_113002074_113011140_113011228_113012149
H1_mix_00088867	chr9	-	1974	14	NIC	ENSG00000136883.16	novel	2195	19	NA	NA	-485	-1	intron_retention	FALSE	canonical	3	11	junction_1	5.67877810008977	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGGTTGGTTCTATCCT	16	True	NA	-18	True	AATAAA	-18	NA	114098421	114091638	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_114092001_114092332_114092452_114092541_114092643_114093228_114093334_114093406_114093498_114093885_114093973_114094180_114094272_114094352_114094456_114095022_114095128_114095213_114095333_114096050_114096208_114096386_114096479_114097606_114097742_114098114
H1_mix_00088868	chr9	-	5524	23	Fusion	ENSG00000235119.1_ENSG00000106948.17	novel	7380	22	NA	NA	1668	0	multi-exon	FALSE	canonical	0	0	junction_1	2.2137810294338	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCGTGTCTCTGCTGTATG	1645	False	NA	-3	True	AAAAAG	-30	NA	114396835	114336127	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr9_-_114337307_114341532_114341726_114342008_114342126_114343707_114343804_114345862_114346010_114346668_114346785_114347723_114347901_114350858_114351022_114355924_114356137_114356862_114356970_114357920_114358168_114359593_114359795_114359895_114360063_114361703_114361912_114362405_114362534_114364559_114364620_114367542_114367698_114368438_114368596_114374092_114374168_114376465_114377533_114381059_114381447_114394356_114394411_114396724
H1_mix_00088869	chr9	-	2954	9	NIC	ENSG00000095397.16	novel	4070	12	NA	NA	-10	-566	combination_of_known_junctions	FALSE	canonical	3	24	junction_4	11.179641094418	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTCTTCATCGTGTCTC	114	False	NA	-10	True	AATAAA	-18	NA	114505460	114407206	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_114408019_114423313_114423524_114424333_114424547_114424987_114425025_114426210_114426414_114466266_114466393_114478552_114478772_114504183_114505052_114505194
H1_mix_00088870	chr9	-	237	1	FSM	ENSG00000201749.1	ENST00000364879.1	114	1	36	-159	36	159	mono-exon	FALSE	NA	NA	NA	NA	NA	341	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCTGAACAAAGGACACTC	NA	False	NA	NA	False	TATAAA	-14	NA	114615532	114615295	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_114615300_114615500
H1_mix_00088871	chr9	-	6469	24	NIC	ENSG00000041982.16	novel	8500	28	NA	NA	0	46	combination_of_known_junctions	FALSE	canonical	3	13	junction_14	30.3965598491281	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGAGTCTGAATTTCAC	-3	True	NA	2	True	AATAAA	-38	NA	115118157	115020513	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_115021268_115023972_115024137_115026533_115026696_115029359_115029457_115030253_115030406_115031552_115031686_115035203_115035335_115036097_115036242_115038260_115038381_115040940_115041085_115042218_115042342_115046409_115046683_115048259_115048533_115057152_115057426_115073602_115073867_115076031_115076122_115076389_115076576_115077942_115078213_115081771_115081929_115082691_115082808_115084208_115084473_115085863_115087274_115090561_115091155_115117981
H1_mix_00088872	chr9	-	5638	21	NIC	ENSG00000041982.16	novel	8500	28	NA	NA	0	34	combination_of_known_junctions	FALSE	canonical	3	29	junction_11	26.6763472012193	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCTTTGAATTGTTGAG	-3	True	NA	-10	True	AATAAA	-26	NA	115118157	115020525	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_115021268_115023972_115024137_115026533_115026696_115029359_115029457_115030253_115030406_115031552_115031686_115035203_115035335_115036097_115036242_115038260_115038381_115040940_115041085_115042218_115042342_115073602_115073867_115076031_115076122_115076389_115076576_115077942_115078213_115081771_115081929_115082691_115082808_115084208_115084473_115085863_115087274_115090561_115091155_115117981
H1_mix_00088873	chr9	-	6786	25	FSM	ENSG00000041982.16	ENST00000341037.8	6786	25	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_14	33.8832759468279	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAATAAAAGCACAAGTAC	NA	False	NA	-44	True	AAAACA	-32	NA	115091147	115020559	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_115021268_115023972_115024137_115026533_115026696_115029359_115029457_115030253_115030406_115031552_115031686_115035203_115035335_115036097_115036242_115038260_115038381_115040940_115041085_115042218_115042342_115046409_115046683_115057152_115057426_115059729_115060003_115063795_115064069_115064646_115064920_115073602_115073867_115076031_115076122_115076389_115076576_115077942_115078213_115081771_115081929_115082691_115082808_115084208_115084473_115085863_115087274_115090561
H1_mix_00088874	chr9	-	422	3	FSM	ENSG00000234692.1	ENST00000444701.1	427	3	0	5	0	-5	multi-exon	FALSE	canonical	2	4	junction_2	0.5	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGGAAACATGCCACTAAT	8290	False	NA	NA	False	AATAAA	-10	NA	115254251	115252542	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_115252847_115253112_115253164_115254184
H1_mix_00088875	chr9	-	5975	37	NIC	ENSG00000136861.19	novel	6079	38	NA	NA	14	6	combination_of_known_junctions	FALSE	canonical	2	10	junction_21	43.744444091666	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGATTCTGTTGTTTTGTGTG	13	True	NA	-1	True	ATTAAA	-24	NA	120580144	120388868	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_120389293_120389740_120389788_120394511_120394639_120400741_120400886_120402805_120403072_120404035_120404114_120408346_120408469_120409126_120409317_120411357_120411475_120415039_120415160_120419787_120419961_120422692_120422742_120437294_120437528_120439398_120439973_120443619_120443743_120447894_120448127_120453455_120453874_120458449_120458623_120460571_120460668_120467859_120467998_120470110_120470218_120471747_120471879_120477349_120477451_120487293_120487438_120491306_120491478_120518426_120518646_120524985_120525079_120527805_120527926_120528743_120528798_120529977_120530141_120536371_120536527_120539040_120539165_120545713_120545791_120550791_120550903_120568320_120568389_120571973_120572042_120579919
H1_mix_00088876	chr9	-	5531	35	NIC	ENSG00000136861.19	novel	5667	37	NA	NA	11	6	combination_of_known_junctions	FALSE	canonical	1	1	junction_17	43.3024788121913	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGATTCTGTTGTTTTGTGTG	10	True	NA	-1	True	ATTAAA	-24	NA	120580147	120388868	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_120389293_120389740_120389788_120394511_120394639_120400741_120400886_120402805_120403072_120404035_120404114_120407011_120407249_120408346_120408469_120409126_120409317_120411357_120411475_120415039_120415160_120419787_120419961_120422692_120422742_120437294_120437528_120439398_120439973_120443619_120443743_120447894_120448127_120467859_120467998_120470110_120470221_120471747_120471879_120477349_120477451_120487293_120487438_120491306_120491478_120518426_120518646_120524985_120525079_120527805_120527926_120528743_120528798_120529977_120530141_120536371_120536527_120539040_120539165_120545713_120545791_120550791_120550903_120568320_120568389_120571973_120572042_120579919
H1_mix_00088878	chr9	-	6804	8	NNC	ENSG00000119402.18	novel	8325	9	NA	NA	-3	-2223	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_6	80.5070664917189	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTGTAGTTAAGACTTT	6	True	NA	NA	False	AATAAA	-21	NA	120793399	120759196	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_120764848_120771347_120771518_120772753_120772841_120776092_120776227_120778350_120778546_120787768_120788187_120793148_120793258_120793359
H1_mix_00088879	chr9	-	6855	8	ISM	ENSG00000119402.18	ENST00000684405.1	8325	9	-62	6137	-28	-2223	5prime_fragment	FALSE	canonical	3	50	junction_6	70.7202017727291	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTGTAGTTAAGACTTT	NA	False	NA	NA	False	AATAAA	-21	NA	120793444	120759196	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_120764848_120771347_120771518_120772753_120772841_120776092_120776227_120778350_120778546_120787768_120788187_120793148_120793258_120793353
H1_mix_00088881	chr9	-	8271	9	FSM	ENSG00000175764.17	ENST00000321582.11	9206	9	0	935	0	-935	multi-exon	FALSE	canonical	0	0	junction_1	0.968245836551854	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCACACATGCACACACGCA	-15	True	NA	NA	False	NA	NA	NA	122093308	121816608	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_121822880_121860336_121860444_121870496_121870749_121974008_121974125_121974883_121974980_121989194_121989771_122031722_122031857_122039271_122039369_122092686
H1_mix_00088882	chr9	-	8780	21	NNC	ENSG00000056586.16	novel	8964	21	NA	NA	211	1	intron_retention	TRUE	canonical	3	10	junction_20	40.67588351837	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTGTTTAATGTCAATA	8311	False	NA	0	True	AATAAA	-22	NA	122905004	122844554	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_122849823_122851099_122851230_122851322_122851437_122853951_122854087_122854184_122854267_122854530_122854616_122855183_122855398_122855731_122855879_122857922_122858094_122858668_122859103_122859916_122860132_122865348_122865658_122877470_122877584_122879754_122879874_122879992_122880126_122880593_122880795_122883203_122883380_122890311_122890546_122892908_122893027_122897278_122897577_122904920
H1_mix_00088884	chr9	-	4157	2	NNC	ENSG00000186130.5	novel	4099	2	NA	NA	341	2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGTGTTTTGTCTTCAT	333	False	NA	-2	True	AATAAA	-20	NA	122912982	122908053	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_122912082_122912853
H1_mix_00088885	chr9	-	381	1	FSM	ENSG00000213216.2	ENST00000392902.2	381	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCAAGCAACTCTACATTT	NA	False	NA	NA	False	NA	NA	NA	123029753	123029372	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_123029400_123029800
H1_mix_00088886	chr9	-	8986	19	Fusion	ENSG00000236901.6_ENSG00000165209.19	novel	6451	19	NA	NA	0	0	intron_retention	TRUE	canonical	1	2	junction_1	171.434218748839	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGGATTGTTCTGTGCA	6	True	NA	-2	True	AATAAA	-28	NA	123268576	123109493	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chr9_-_123116099_123122192_123122327_123128213_123128259_123132844_123132969_123136040_123136182_123136380_123136516_123139528_123139688_123146854_123147055_123147777_123147871_123158011_123158124_123158331_123158430_123159095_123159208_123160366_123160463_123160976_123161069_123169901_123170047_123173676_123173843_123179006_123179228_123184131_123184299_123268435
H1_mix_00088887	chr9	-	1874	18	NIC	ENSG00000119522.17	novel	3612	21	NA	NA	31	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	30.283436152298	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATGACAGGTTTTCTG	53	False	NA	12	True	NA	NA	NA	123930076	123401552	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_123401913_123403401_123403491_123440359_123440492_123450692_123450750_123452275_123452348_123557569_123557696_123583168_123583271_123609435_123609482_123630375_123630477_123652012_123652124_123667025_123667080_123671290_123671372_123676719_123676790_123757702_123757823_123769513_123769564_123792586_123792631_123878950_123879022_123929888
H1_mix_00088888	chr9	-	5173	2	NNC	ENSG00000148200.17	novel	7065	10	NA	NA	73385	7519	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGGACACTAAGGCCAGGT	NA	False	NA	NA	False	NA	NA	NA	124522423	124509755	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_124509781_124517275
H1_mix_00088890	chr9	-	884	1	FSM	ENSG00000177736.4	ENST00000411625.2	547	1	-417	80	-417	-80	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCGCTGCAGAGCTCACT	NA	False	NA	NA	False	NA	NA	NA	124969257	124968373	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_124968400_124969300
H1_mix_00088891	chr9	-	1881	17	ISM	ENSG00000173611.18	ENST00000336505.11	12111	18	24	28622	2	28	5prime_fragment	FALSE	canonical	3	26	junction_6	9.08789545219354	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTCACACTGGTCTGCTAA	-8	True	NA	NA	False	AATAAA	-45	NA	125143504	124971229	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_124971471_124971670_124971845_124976113_124976187_124994933_124995016_124999890_124999991_125001964_125002044_125003113_125003216_125003468_125003571_125018798_125018952_125019106_125019206_125020672_125020770_125026811_125026911_125028391_125028479_125029643_125029740_125055875_125056008_125142632_125142678_125143384
H1_mix_00088892	chr9	-	4870	6	FSM	ENSG00000044574.9	ENST00000681045.1	4858	6	0	-12	0	5	multi-exon	FALSE	canonical	3	5704	junction_4	145.6434001251	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGATGTCTATAGTTTG	1	True	NA	-3	True	ATTAAA	-20	NA	125241368	125234847	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_125237155_125238140_125238828_125238940_125239332_125239420_125240310_125240675_125240908_125241004
H1_mix_00088894	chr9	-	2195	9	NIC	ENSG00000119487.17	novel	2977	10	NA	NA	7	465	combination_of_known_junctions	FALSE	canonical	3	172	junction_8	252.569761402667	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTCCTTACAGCGCCTG	35	False	NA	NA	False	NA	NA	NA	125707170	125438003	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_125439013_125444500_125444599_125467971_125468110_125484442_125484584_125543058_125543169_125559632_125559810_125585554_125585728_125657650_125657800_125706970
H1_mix_00088897	chr9	-	746	1	FSM	ENSG00000229582.3	ENST00000614664.1	2176	1	-25	1455	-25	-1455	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAATCCAGGGACTACTC	NA	False	NA	NA	False	NA	NA	NA	125746577	125745831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_125745800_125746600
H1_mix_00088898	chr9	-	2276	4	FSM	ENSG00000197958.13	ENST00000497322.1	2275	4	0	-1	0	1	multi-exon	FALSE	canonical	3	9099	junction_3	315.246288197375	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGATTTTCTGGTGTGGCG	-2	True	NA	-15	True	AATAAA	-18	NA	127451405	127447678	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127447990_127448336_127448424_127449280_127449363_127449609
H1_mix_00088899	chr9	-	1539	4	FSM	ENSG00000187024.15	ENST00000423807.5	1570	4	31	0	31	0	multi-exon	FALSE	canonical	1	2	junction_1	81.78155184528	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGGCTTGGAAGCTGA	8902	False	NA	NA	False	AAAAAG	-4	NA	127715972	127713492	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127714283_127714602_127714703_127714974_127715195_127715543
H1_mix_00088900	chr9	-	2098	4	ISM	ENSG00000160404.18	ENST00000373284.10	1500	5	-41	-2	-22	2	intron_retention	FALSE	canonical	3	54	junction_3	16.8193010820572	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTTGCTAAGACTTTTAA	NA	False	NA	-6	True	AATAAA	-21	NA	127735335	127731521	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_127732279_127732563_127732692_127733384_127733561_127734298
H1_mix_00088903	chr9	-	1684	7	NNC	ENSG00000136840.19	novel	1706	6	NA	NA	0	26831	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	39.6838198206216	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGGGGGGCTGGGCACAG	21	True	NA	NA	False	TTTAAA	-22	NA	127916996	127881054	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_127881080_127907887_127908582_127909950_127910059_127912267_127912681_127914655_127914842_127916407_127916495_127916825
H1_mix_00088904	chr9	-	2348	6	FSM	ENSG00000160408.16	ENST00000373141.5	2424	6	77	-1	77	0	multi-exon	FALSE	canonical	0	0	junction_5	164.801699020368	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGTGTCCTGTGTCACCT	9285	False	NA	-16	True	AATAAA	-17	NA	127897331	127885320	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127886789_127887483_127887592_127890636_127891044_127894511_127894692_127896241_127896333_127897237
H1_mix_00088905	chr9	-	1941	5	FSM	ENSG00000160408.16	ENST00000542456.5	2018	5	77	0	77	0	multi-exon	FALSE	canonical	0	0	junction_4	208.511390576151	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGTGTCCTGTGTCACCT	9285	False	NA	-16	True	AATAAA	-17	NA	127897331	127885320	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127886789_127887483_127887592_127894511_127894692_127896241_127896333_127897237
H1_mix_00088906	chr9	-	2334	6	NIC	ENSG00000160408.16	novel	2410	7	NA	NA	7	0	intron_retention	FALSE	canonical	3	11	junction_1	166.248488714935	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGTGTCCTGTGTCACCT	4	True	NA	-16	True	AATAAA	-17	NA	127899586	127885320	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_127886785_127887483_127887592_127890636_127891044_127894511_127894692_127896241_127896333_127899502
H1_mix_00088908	chr9	-	1475	4	NIC	ENSG00000136840.19	novel	1013	5	NA	NA	0	9	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	50.0754985552371	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCGTGGTCATGTGTCTGA	21	True	NA	-1	True	NA	NA	NA	127916996	127907876	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_127908582_127912267_127912681_127914655_127914842_127916825
H1_mix_00088909	chr9	-	1036	4	ISM	ENSG00000167103.12	ENST00000300432.3	1104	5	156	0	49	0	intron_retention	FALSE	canonical	3	46	junction_2	17.8200885394982	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGCTTTTGGATTCCGG	8076	False	NA	-6	True	AATAAA	-20	NA	127927335	127921528	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_127922115_127925106_127925261_127925866_127925980_127927152
H1_mix_00088910	chr9	-	5564	8	FSM	ENSG00000167106.12	ENST00000373084.8	3352	8	-1820	-392	-1820	93	multi-exon	FALSE	canonical	3	167	junction_7	8.8109393972053	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGGTGGGGAAGGTGTAG	NA	False	NA	87	True	NA	NA	NA	127952542	127940488	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_127943238_127944614_127944685_127944776_127944899_127945366_127945563_127945648_127945754_127948070_127948226_127948367_127948415_127950422
H1_mix_00088911	chr9	-	965	2	FSM	ENSG00000171169.9	ENST00000470245.1	963	2	0	-2	0	2	multi-exon	FALSE	canonical	3	15	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTGTCTTTATTGCTT	3591	False	NA	1	True	ATTAAA	-26	NA	128063742	128061230	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128061827_128063373
H1_mix_00088912	chr9	-	2260	6	FSM	ENSG00000148334.16	ENST00000476655.6	2260	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	436.423372426363	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATGGCAGGCATCTCAT	14	True	NA	-24	True	AATAAA	-19	NA	128127721	128120715	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128121274_128122361_128122480_128122933_128123135_128123701_128123852_128124491_128125442_128127438
H1_mix_00088913	chr9	-	2929	17	NIC	ENSG00000148337.22	novel	2975	17	NA	NA	12	2	intron_retention	FALSE	canonical	3	77	junction_12	129.272000061885	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACCAGTACTTCTGTCTG	29	True	NA	-10	True	AATAAA	-25	NA	128191538	128166061	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_128166407_128166758_128166881_128167094_128167165_128169051_128169202_128169405_128169520_128170019_128170108_128176350_128176476_128177565_128177764_128178368_128178491_128178708_128179416_128180414_128180524_128180720_128180800_128185546_128185777_128187862_128187935_128190328_128190445_128190687_128190863_128191431
H1_mix_00088915	chr9	-	426	2	FSM	ENSG00000167110.19	ENST00000490628.3	462	2	34	2	8	-2	multi-exon	FALSE	canonical	3	75	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTGTGAAGTTTAAATGA	45	False	NA	-1	True	TATAAA	-16	NA	128275987	128273641	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_128273973_128275892
H1_mix_00088916	chr9	-	986	11	NIC	ENSG00000198917.13	novel	4259	12	NA	NA	0	22	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	133.755747540059	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCACACCTGAAAGTTCTAA	6	True	NA	NA	False	NA	NA	NA	128829794	128822775	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_128822834_128824071_128824175_128824770_128824870_128824976_128825050_128826021_128826153_128826383_128826434_128826539_128826630_128827031_128827192_128828734_128828861_128829109_128829156_128829744
H1_mix_00088917	chr9	-	947	3	FSM	ENSG00000136827.12	ENST00000474192.1	947	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	239.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTATGAGAGACTGCTC	5460	False	NA	-9	True	TTTAAA	-10	NA	129818781	129813607	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_129814223_129818352_129818648_129818744
H1_mix_00088918	chr9	-	5340	16	NIC	ENSG00000187239.17	novel	5410	16	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	14.5748642074863	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCGTGTCACGGGACTGT	19	True	NA	-10	True	AATAAA	-13	NA	130043154	129887186	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_129890547_129895837_129895997_129899964_129900102_129900425_129900548_129902868_129903002_129908889_129909000_129923843_129923997_129924959_129925158_129927194_129927342_129929566_129929696_129957359_129957465_129958490_129958554_129978464_129978613_129979317_129979375_129994842_129994959_130042951
H1_mix_00088919	chr9	-	3928	2	FSM	ENSG00000126882.13	ENST00000372271.4	3927	2	0	-1	0	-1	multi-exon	FALSE	canonical	3	16	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGCTAGGTCCTGGATG	-1	True	NA	NA	False	AATAAA	-18	NA	131276510	131258076	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_131261351_131275856
H1_mix_00088920	chr9	-	762	3	FSM	ENSG00000160563.14	ENST00000474263.1	762	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	210	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTGAATTTTTAATTT	0	True	NA	NA	False	AATAAA	-15	NA	132079866	132073350	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_132073743_132077441_132077587_132079641
H1_mix_00088922	chr9	-	3201	20	NNC	ENSG00000125485.18	novel	4159	20	NA	NA	-44	-1292	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_19	23.2895777577217	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGTGGTCCCTCTTATTT	-15	True	NA	-1	True	NA	NA	NA	132670027	132594288	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_132595113_132612086_132612256_132618329_132618442_132625663_132625746_132630263_132630404_132632040_132632092_132642003_132642064_132645894_132646072_132646822_132647059_132648188_132648296_132648431_132648552_132650233_132650299_132651074_132651117_132652447_132652493_132658670_132658736_132659709_132659781_132661207_132661252_132662260_132662337_132662438_132662696_132669569
H1_mix_00088923	chr9	-	3012	18	NIC	ENSG00000125485.18	novel	4159	20	NA	NA	79	-1292	combination_of_known_splicesites	FALSE	canonical	3	7	junction_2	23.8231663007912	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGTGGTCCCTCTTATTT	80	False	NA	-1	True	NA	NA	NA	132670322	132594288	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_132595113_132612086_132612256_132630263_132630404_132632040_132632092_132642003_132642064_132645894_132646072_132646822_132647059_132648188_132648296_132648431_132648552_132650233_132650299_132651074_132651117_132652447_132652493_132658670_132658736_132659709_132659781_132661207_132661252_132662260_132662337_132662438_132662696_132669859
H1_mix_00088924	chr9	-	1606	13	NNC	ENSG00000165695.10	novel	1579	13	NA	NA	13	4	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_12	4.52462398683274	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACGTCCTGAAGGTGAGGT	10	True	NA	NA	False	AATAAA	-20	NA	132878271	132725573	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_132725926_132727453_132727535_132792633_132792776_132814637_132814728_132823204_132823337_132826853_132827055_132828012_132828085_132828644_132828727_132854856_132854926_132863664_132863779_132866903_132866954_132875114_132875236_132878171
H1_mix_00088927	chr9	-	2857	6	FSM	ENSG00000148288.13	ENST00000470431.5	2870	6	13	0	-5	0	multi-exon	FALSE	canonical	3	6	junction_3	4.4988887516808	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAGCTAGGGTGATTTTT	3	True	NA	-25	True	AATAAA	-17	NA	133163906	133152952	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133155313_133155900_133155937_133156014_133156066_133161466_133161533_133162341_133162533_133163753
H1_mix_00088928	chr9	-	3805	5	FSM	ENSG00000148297.16	ENST00000610672.4	4367	5	0	562	0	-562	multi-exon	FALSE	canonical	1	7	junction_4	177.372489411408	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACCAGGTCAGGCCCAGT	8768	False	NA	NA	False	NA	NA	NA	133347703	133338884	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133341695_133344124_133344334_133345171_133345253_133346539_133346701_133347159
H1_mix_00088931	chr9	-	2863	5	FSM	ENSG00000148248.14	ENST00000545297.5	2863	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	606.793416246419	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCGTTGCCCAGCCTGAA	NA	False	NA	-1	True	AATAAA	-32	NA	133376166	133361449	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_133363760_133365984_133366029_133366598_133366676_133367258_133367446_133375921
H1_mix_00088932	chr9	-	2533	10	NIC	ENSG00000160326.14	novel	2491	10	NA	NA	3	13	combination_of_known_splicesites	FALSE	canonical	1	2	junction_6	39.8797575435006	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTGGGGTCTACTCCAG	4	True	NA	-2	True	AATAAA	-29	NA	133479124	133471080	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_133472177_133473104_133473251_133473414_133473601_133473979_133474089_133474960_133475114_133475399_133475612_133476232_133476337_133477034_133477242_133478253_133478417_133478967
H1_mix_00088933	chr9	-	2031	2	FSM	ENSG00000225361.4	ENST00000655118.1	3043	2	28	984	28	-984	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCCACAACCACAGTGCC	NA	False	NA	NA	False	CATAAA	-34	NA	135468997	135463729	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_135464851_135468087
H1_mix_00088934	chr9	-	301	1	FSM	ENSG00000225361.4	ENST00000603893.1	424	1	205	-82	185	82	mono-exon	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTCGCACGGAGGCCAGA	211	False	NA	NA	False	GGGGCT	-26	NA	135480533	135480232	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_135480200_135480500
H1_mix_00088935	chr9	-	7273	16	NNC	ENSG00000130559.19	novel	8018	17	NA	NA	-144	0	intron_retention	FALSE	canonical	2	5	junction_15	42.0895341966253	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTTGGAGAATGTTTTAC	18	True	NA	-20	True	AATAAA	-20	NA	135907372	135808486	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_135811612_135815096_135815216_135815889_135816006_135817976_135818080_135818407_135818617_135819009_135819147_135820838_135823261_135823949_135824035_135824788_135824881_135827406_135827585_135850136_135850234_135850321_135850462_135862466_135862609_135866455_135866537_135906999_135907160_135907305
H1_mix_00088936	chr9	-	6778	16	NIC	ENSG00000130559.19	novel	8018	17	NA	NA	4	0	intron_retention	FALSE	canonical	3	20	junction_12	34.3450465456406	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGAATCGTATGTGTGAG	-6	True	NA	-11	True	AATAAA	-22	NA	135907542	135809580	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_135811612_135815096_135815216_135815889_135816006_135817976_135818080_135818407_135818617_135819009_135819147_135820838_135823261_135823949_135824035_135824788_135824881_135827406_135827585_135850136_135850234_135850321_135850462_135866455_135866537_135881632_135881795_135882815_135883079_135906999
H1_mix_00088937	chr9	-	6587	18	NNC	ENSG00000130559.19	novel	5730	18	NA	NA	-133	-6	intron_retention	FALSE	canonical	2	5	junction_17	35.4996954029527	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTACATTGAATCGTATG	29	True	NA	-17	True	AATAAA	-16	NA	135907361	135809586	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_135811612_135815096_135815216_135815889_135816006_135817976_135818080_135818407_135818617_135819009_135819147_135820838_135823261_135823949_135824035_135824788_135824881_135827406_135827585_135850136_135850234_135850321_135850462_135862466_135862609_135866455_135866537_135881632_135881795_135882815_135883079_135906999_135907160_135907305
H1_mix_00088938	chr9	-	1833	10	NNC	ENSG00000130560.9	novel	838	6	NA	NA	0	8301	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	176.732133223079	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCCAGCTGTAACTTCC	-18	True	NA	-13	True	AATAAA	-19	NA	135961373	135924667	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_135925188_135938221_135938361_135939672_135939760_135945027_135945251_135945888_135945998_135946268_135946372_135947797_135947906_135953679_135953754_135955294_135955416_135961024
H1_mix_00088939	chr9	-	4667	24	NIC	ENSG00000165684.6	novel	4693	24	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	17	junction_11	23.6532128927812	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCTGTTGTGGTTTTGTT	1	True	NA	-1	True	AATAAA	-29	NA	136400170	136375568	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_136375801_136376348_136376482_136377542_136379300_136379836_136379865_136380739_136380851_136381321_136381393_136381823_136382074_136382252_136382337_136383185_136383669_136383952_136384033_136384719_136384815_136387512_136387580_136387741_136387849_136388443_136388592_136391941_136392107_136392521_136392595_136392672_136392778_136394248_136394331_136394799_136394879_136395297_136395424_136395602_136395771_136396976_136397024_136398298_136398438_136400133
H1_mix_00088940	chr9	-	7006	21	NNC	ENSG00000165684.6	novel	4693	24	NA	NA	-493	0	intron_retention	FALSE	canonical	2	4	junction_5	22.513273862324	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGGCTGTTGTGGTTTTG	4324	False	NA	-3	True	AATAAA	-27	NA	136399290	136375570	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_136379300_136379836_136379865_136380739_136380851_136381321_136381393_136381823_136381990_136382252_136382337_136383185_136383669_136383952_136384033_136384719_136384815_136387512_136387580_136387741_136387849_136388443_136388592_136391941_136392107_136392521_136392595_136392672_136392778_136394248_136394331_136394799_136394879_136395297_136395424_136395602_136395771_136396976_136397024_136398298
H1_mix_00088943	chr9	-	8886	31	NNC	ENSG00000148396.19	novel	9018	32	NA	NA	-27	18691	intron_retention	TRUE	non_canonical	0	0	junction_1	45.9365383497228	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGAACCCAGGCCCAAGTC	-20	True	NA	NA	False	NA	NA	NA	136483067	136421404	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_136421428_136440104_136441824_136443822_136443901_136445644_136445720_136446854_136446950_136447226_136447365_136447568_136447681_136447852_136447910_136448083_136448162_136451255_136451409_136453427_136453511_136454108_136454328_136455600_136455794_136456052_136456167_136457443_136457585_136459133_136459240_136459443_136459556_136459756_136459875_136460041_136460124_136461176_136461275_136462886_136463133_136463462_136463602_136463678_136463741_136464419_136464563_136465961_136466137_136466263_136466463_136466956_136467084_136468414_136468513_136471974_136472112_136474048_136477685_136482937
H1_mix_00088944	chr9	-	4329	1	FSM	ENSG00000148384.14	ENST00000635815.1	4311	1	-22	4	0	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTAGCCGGGCGTGGTGGC	-23	True	NA	NA	False	AATAAA	-13	NA	136439845	136435516	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136435500_136439800
H1_mix_00088945	chr9	-	6932	29	NIC	ENSG00000148396.19	novel	8806	30	NA	NA	1276	3	intron_retention	FALSE	canonical	3	43	junction_4	41.8015842879142	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTCCCTTTGGTTTGCT	8953	False	NA	3	True	AATAAA	-32	NA	136475805	136440092	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_136441824_136443822_136443901_136445644_136445720_136446854_136447016_136447226_136447365_136447568_136447681_136447852_136447910_136448083_136448162_136451255_136451409_136453427_136453511_136454108_136454328_136455600_136455794_136456052_136456167_136457443_136457585_136459133_136459240_136459443_136459556_136459756_136459875_136460041_136460124_136461176_136461275_136462886_136463133_136463462_136463602_136463678_136463741_136464419_136464563_136465961_136466137_136466263_136466463_136466956_136467084_136468414_136468513_136471974_136472112_136474048
H1_mix_00088946	chr9	-	11311	30	NNC	ENSG00000148396.19	novel	6551	31	NA	NA	-27	3	intron_retention	FALSE	canonical	1	2	junction_27	46.2925608393038	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTCCCTTTGGTTTGCT	-20	True	NA	3	True	AATAAA	-32	NA	136483067	136440092	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_136441824_136443822_136443901_136445644_136445720_136446854_136446950_136447226_136447365_136447568_136447681_136447852_136447910_136448083_136448162_136451255_136451409_136453427_136453511_136454108_136454328_136455600_136455794_136456052_136456167_136457443_136457585_136459133_136459240_136459443_136459556_136459756_136459875_136460041_136460124_136461176_136461275_136462886_136463133_136463462_136463602_136463678_136463741_136464419_136464563_136465961_136466137_136466263_136466463_136466956_136467084_136468414_136468513_136469538_136472112_136474048_136477685_136482937
H1_mix_00088948	chr9	-	675	7	NNC	ENSG00000107223.13	novel	662	5	NA	NA	0	93629	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1138.58236661014	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAGAAAAAAGAAA	4	True	NA	NA	False	NA	NA	NA	136866266	136768489	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chr9_-_136768520_136824326_136824351_136862117_136862346_136862905_136863000_136863287_136863449_136863819_136863872_136866180
H1_mix_00088949	chr9	-	1932	5	FSM	ENSG00000159069.14	ENST00000487794.5	1932	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	248.605485659508	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTGTCCAGTCTCTGT	7431	False	NA	-1	True	AATAAA	-16	NA	136942668	136940434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_136941172_136941250_136941464_136941536_136941685_136941754_136942467_136942546
H1_mix_00088951	chr9	-	2089	9	FSM	ENSG00000054179.12	ENST00000355097.7	2102	9	15	-2	15	2	multi-exon	FALSE	canonical	2	3	junction_5	1.93245310421754	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGAAAGGAGAGTGTCTGT	6	True	NA	-5	True	AATAAA	-17	NA	137054046	137048104	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137048861_137048940_137049076_137049869_137049990_137050283_137050539_137050901_137051130_137051210_137051371_137051509_137051661_137052230_137052349_137053880
H1_mix_00088954	chr9	-	2143	2	ISM	ENSG00000176248.9	ENST00000487917.1	1972	3	64	0	64	0	intron_retention	FALSE	canonical	3	89	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTGTCCTGGTGGCTT	NA	False	NA	-1	True	ATTAAA	-16	NA	137177008	137174783	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chr9_-_137175155_137175236
H1_mix_00088955	chr9	-	1796	2	FSM	ENSG00000212864.4	ENST00000391553.3	1732	2	-55	-9	-55	-3	multi-exon	FALSE	canonical	2	3	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCTGGACTGAAGCTTG	3	True	NA	-4	True	ATTAAA	-23	NA	137222295	137220249	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137221739_137221988
H1_mix_00088956	chr9	-	2150	1	FSM	ENSG00000260996.1	ENST00000566954.1	1854	1	-297	1	-297	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTCGGTCTCTTTACGG	6260	False	NA	-3	True	AATAAA	-19	NA	137296018	137293868	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137293900_137296000
H1_mix_00088957	chr9	-	1978	12	FSM	ENSG00000187609.16	ENST00000487745.5	1992	12	0	14	0	-14	multi-exon	FALSE	canonical	1	2	junction_7	1.87634249459548	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAAAGTGCCCGACTGCT	NA	False	NA	-36	True	AATAAA	-2	NA	137352984	137306930	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137307264_137307607_137307647_137309606_137309701_137323724_137323857_137324089_137324144_137348070_137348239_137349109_137349283_137349368_137349532_137351037_137351148_137351317_137351529_137352065_137352202_137352619
H1_mix_00088958	chr9	-	1671	8	NIC	ENSG00000148399.13	novel	2302	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_7	68.0534004008797	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGAGTTTATAACATGTTT	7	True	NA	-13	True	ATTAAA	-18	NA	137578888	137554903	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chr9_-_137555649_137564433_137564607_137564892_137564959_137565084_137565155_137574207_137574381_137574751_137574844_137576079_137576168_137578624
H1_mix_00088959	chr9	-	316	1	FSM	ENSG00000233998.1	ENST00000437270.1	562	1	199	47	199	-47	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGAGGAACGGGATAAGG	NA	False	NA	NA	False	GATAAA	-45	NA	137641348	137641032	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137641000_137641300
H1_mix_00088960	chr9	-	265	1	FSM	ENSG00000255585.3	ENST00000421194.3	1026	1	986	-225	489	225	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGGGAGGCAGGGC	1012	False	NA	NA	False	NA	NA	NA	137787704	137787439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chr9_-_137787400_137787700
H1_mix_00088961	chr9	+	306	1	Intergenic	novelGene_1525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCGTAGGCATCTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	8012781	8013087	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_8012800_8013100
H1_mix_00088962	chr9	+	8111	1	Intergenic	novelGene_1533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCTGTTAAAATGCAAAAT	NA	False	NA	NA	False	NA	NA	NA	14694933	14703044	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_14694900_14703000
H1_mix_00088963	chr9	+	210	1	Intergenic	novelGene_1537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGAGTTTTGGGTCTATG	2141	False	NA	NA	False	ATTAAA	-38	NA	21490526	21490736	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_21490500_21490700
H1_mix_00088964	chr9	+	405	1	Intergenic	novelGene_1543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAGAAATATGTGAGA	1617	False	NA	NA	False	AATAAA	-32	NA	30690568	30690973	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_30690600_30691000
H1_mix_00088965	chr9	+	1739	1	Intergenic	novelGene_1549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTAGCTGCACACACCTG	NA	False	NA	NA	False	NA	NA	NA	37881892	37883631	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_37881900_37883600
H1_mix_00088966	chr9	+	230	1	Intergenic	novelGene_1554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTATCATCTGTTCCAGCT	NA	False	NA	NA	False	AATAAA	-22	NA	42731353	42731583	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_42731400_42731600
H1_mix_00088968	chr9	+	277	1	Intergenic	novelGene_1558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGCACCAGAGTTGGGG	NA	False	NA	NA	False	AAAAAG	-25	NA	69407507	69407784	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_69407500_69407800
H1_mix_00088969	chr9	+	2643	1	Intergenic	novelGene_1569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCGAACTCATTGCCTTA	NA	False	NA	NA	False	NA	NA	NA	85460102	85462745	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_85460100_85462700
H1_mix_00088970	chr9	+	3792	1	Intergenic	novelGene_1572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTATTTAAAAATAAAGTCA	NA	False	NA	NA	False	AAAACA	-30	NA	85541626	85545418	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_85541600_85545400
H1_mix_00088971	chr9	+	275	1	Intergenic	novelGene_1579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAAAACAAGGCAATACTG	NA	False	NA	NA	False	NA	NA	NA	91911746	91912021	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_91911700_91912000
H1_mix_00088972	chr9	+	315	1	Intergenic	novelGene_1583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTCGTTCCGTGACTA	NA	False	NA	NA	False	NA	NA	NA	94541290	94541605	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_94541300_94541600
H1_mix_00088973	chr9	+	2793	1	Intergenic	novelGene_1585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTGGACAGACTCAAGAG	NA	False	NA	NA	False	AATAAA	-3	NA	97108407	97111200	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_97108400_97111200
H1_mix_00088974	chr9	+	297	1	Intergenic	novelGene_1595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAATTATACATAATT	705	False	NA	NA	False	AAAAAG	-9	NA	111485046	111485343	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_111485000_111485300
H1_mix_00088975	chr9	+	273	1	Intergenic	novelGene_1606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTCTTATCCTTGAAAT	NA	False	NA	NA	False	NA	NA	NA	124255806	124256079	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_+_124255800_124256100
H1_mix_00088976	chr9_KI270718v1_random	+	294	1	Intergenic	novelGene_1611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATATTTATTTTCACAC	NA	False	NA	NA	False	NA	NA	NA	22691	22985	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chr9_KI270718v1_random_+_22700_23000
H1_mix_00088977	chrM	+	954	1	FSM	ENSG00000211459.2	ENST00000389680.2	954	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5059	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAGTGTAGCTTAACACAA	-4	True	NA	NA	False	NA	NA	NA	647	1601	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrM_+_600_1600
H1_mix_00088978	chrM	+	1559	1	FSM	ENSG00000210082.2	ENST00000387347.2	1559	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20871	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAGATGGCAGAGCCCGG	-2	True	NA	NA	False	NA	NA	NA	1670	3229	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrM_+_1700_3200
H1_mix_00088979	chrM	+	956	1	FSM	ENSG00000198888.2	ENST00000361390.2	956	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8940	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATATGTCTGATAAAAG	-4	True	NA	NA	False	NA	NA	NA	3306	4262	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrM_+_3300_4300
H1_mix_00088980	chrM	+	1042	1	FSM	ENSG00000198763.3	ENST00000361453.3	1042	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8178	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATTTAGGTTAAATACA	17	True	NA	NA	False	NA	NA	NA	4469	5511	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrM_+_4500_5500
H1_mix_00088981	chrM	+	2006	1	FSM	ENSG00000198804.2	ENST00000361624.2	1542	1	-392	-72	-392	72	mono-exon	FALSE	NA	NA	NA	NA	NA	10567	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGTATTAGAAAAACCATT	47	False	NA	NA	False	NA	NA	NA	5511	7517	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrM_+_5500_7500
H1_mix_00088982	chrM	+	709	1	FSM	ENSG00000198712.1	ENST00000361739.1	684	1	0	-25	0	25	mono-exon	FALSE	NA	NA	NA	NA	NA	21848	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGTAAAGCTAACTTAGC	-2	True	NA	NA	False	NA	NA	NA	7585	8294	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrM_+_7600_8300
H1_mix_00088983	chrM	+	207	1	FSM	ENSG00000228253.1	ENST00000361851.1	207	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTACCCGCCGCAGTACTG	2	True	NA	NA	False	AATGAA	-42	NA	8365	8572	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrM_+_8400_8600
H1_mix_00088984	chrM	+	681	1	FSM	ENSG00000198899.2	ENST00000361899.2	681	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	775	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCCACCAATCACATGCC	21	False	NA	NA	False	NA	NA	NA	8526	9207	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrM_+_8500_9200
H1_mix_00088985	chrM	+	1418	1	FSM	ENSG00000198938.2	ENST00000362079.2	784	1	-634	0	-634	0	mono-exon	FALSE	NA	NA	NA	NA	NA	52842	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTTTTAGTATAAATAGT	9	False	NA	NA	False	NA	NA	NA	8572	9990	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrM_+_8600_10000
H1_mix_00088986	chrM	+	346	1	FSM	ENSG00000198840.2	ENST00000361227.2	346	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4678	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGTATATAGTTTAAACAAA	-4	True	NA	NA	False	AAAAAG	-19	NA	10058	10404	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrM_+_10100_10400
H1_mix_00088987	chrM	+	297	1	FSM	ENSG00000212907.2	ENST00000361335.1	297	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAATCGTCCCAACAATT	-2	True	NA	NA	False	NA	NA	NA	10469	10766	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrM_+_10500_10800
H1_mix_00088988	chrM	+	1378	1	FSM	ENSG00000198886.2	ENST00000361381.2	1378	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7033	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAATATAGTTTAACCAAA	-4	True	NA	NA	False	NA	NA	NA	10759	12137	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrM_+_10800_12100
H1_mix_00088989	chrM	+	1812	1	FSM	ENSG00000198786.2	ENST00000361567.2	1812	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1463	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATTCCCCCGAGCAATCT	-2	True	NA	NA	False	NA	NA	NA	12336	14148	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrM_+_12300_14100
H1_mix_00088990	chrM	+	1141	1	FSM	ENSG00000198727.2	ENST00000361789.2	1141	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10455	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCTTGTAGTATAAACTAA	-7	True	NA	NA	False	AAAACA	-19	NA	14746	15887	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrM_+_14700_15900
H1_mix_00088991	chrM	+	682	1	FSM	ENSG00000210195.2	ENST00000387460.2	66	1	0	-616	0	616	mono-exon	FALSE	NA	NA	NA	NA	NA	353	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		-1	True	NA	NA	False	CATAAA	-45	NA	15887	16569	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrM_+_15900_16600
H1_mix_00088992	chrM	-	525	1	FSM	ENSG00000198695.2	ENST00000361681.2	525	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGATTAGGAGTAGGG	-1	True	NA	NA	False	NA	NA	NA	14673	14148	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrM_-_14100_14700
H1_mix_00088994	chrUn_GL000195v1	+	1348	2	Intergenic	novelGene_1622	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	79	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTATTTTCAGTTCTGT	NA	False	NA	NA	False	ATTAAA	-7	NA	138021	141776	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrUn_GL000195v1_+_138141_140547
H1_mix_00088995	chrUn_GL000195v1	+	1003	3	Intergenic	novelGene_1620	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	68	junction_2	21	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCTTTTCATGACTGC	NA	False	NA	NA	False	ATTAAA	-17	NA	137988	141363	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrUn_GL000195v1_+_138141_140413_140449_140547
H1_mix_00088996	chrUn_GL000195v1	+	741	4	Intergenic	novelGene_1621	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_3	34.322004603461	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATATTTGTTGCCTCATGC	NA	False	NA	NA	False	AATAAA	-12	NA	138001	149489	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrUn_GL000195v1_+_138141_140413_140517_142142_142241_149088
H1_mix_00088997	chrUn_GL000195v1	+	1012	3	Intergenic	novelGene_1618	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	68	junction_2	10.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCTTTTCATGACTGC	NA	False	NA	NA	False	ATTAAA	-17	NA	137968	141363	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrUn_GL000195v1_+_138141_140424_140449_140547
H1_mix_00088999	chrUn_GL000195v1	-	2330	3	Intergenic	novelGene_1612	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	47	junction_2	14	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTCTCAAATTACTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	86696	42937	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrUn_GL000195v1_-_44924_48954_49120_86517
H1_mix_00089000	chrUn_GL000195v1	-	6276	3	Intergenic	novelGene_1613	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	21.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAATTTCATTGTGTCTC	NA	False	NA	NA	False	AATAAA	-5	NA	76378	42948	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrUn_GL000195v1_-_46802_48954_49120_74120
H1_mix_00089001	chrUn_GL000195v1	-	540	2	Intergenic	novelGene_1617	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	25	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATTTATTAAAATTTTTG	NA	False	NA	NA	False	AATAAA	-18	NA	86643	83702	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrUn_GL000195v1_-_84117_86517
H1_mix_00089004	chrUn_GL000195v1	+	703	4	Intergenic	novelGene_1623	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_3	24.8596057893121	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATATTTGTTGCCTCATGC	NA	False	NA	NA	False	AATAAA	-12	NA	138028	149489	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrUn_GL000195v1_+_138141_140424_140517_142142_142241_149088
H1_mix_00089007	chrUn_GL000195v1	-	7463	2	Intergenic	novelGene_1614	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGCAATTTCATTGTGT	NA	False	NA	NA	False	AATAAA	-2	NA	55369	42951	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrUn_GL000195v1_-_44924_49878
H1_mix_00089009	chrUn_GL000195v1	-	3365	3	Intergenic	novelGene_1616	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	23.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGGATTTTTTTGCCTT	NA	False	NA	NA	False	TATAAA	-28	NA	86622	43706	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrUn_GL000195v1_-_46802_48954_49120_86517
H1_mix_00089011	chrUn_GL000195v1	+	1329	3	Intergenic	novelGene_1619	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_2	46	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTTCTTATTTTCAGT	NA	False	NA	NA	False	ATTAAA	-2	NA	137980	141771	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrUn_GL000195v1_+_138141_140413_140517_140705
H1_mix_00089012	chrUn_GL000195v1	+	1575	1	Intergenic	novelGene_1624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTTGCCTCATGCATT	NA	False	NA	NA	False	AATAAA	-15	NA	147917	149492	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrUn_GL000195v1_+_147900_149500
H1_mix_00089013	chrUn_GL000195v1	-	2248	4	Intergenic	novelGene_1615	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_3	23.7205958328763	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTGTTTCTACATTTT	NA	False	NA	NA	False	AATAAA	-25	NA	86684	43067	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrUn_GL000195v1_-_44924_48954_49120_74120_74181_86517
H1_mix_00089015	chrUn_GL000220v1	+	5561	1	Intergenic	novelGene_1626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCGCGCGCGCGTGCGGGGG	NA	False	NA	NA	False	NA	NA	NA	112866	118427	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrUn_GL000220v1_+_112900_118400
H1_mix_00089017	chrUn_GL000220v1	+	1136	4	Intergenic	novelGene_1627	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	39	junction_1	32.5610537640019	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGAAAGCACGGTGTGAACG	NA	False	NA	NA	False	AATAAA	-9	NA	119666	122351	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrUn_GL000220v1_+_120046_121094_121232_121604_121702_121828
H1_mix_00089018	chrUn_GL000220v1	+	4509	1	Intergenic	novelGene_1629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	157293	161802	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrUn_GL000220v1_+_157300_161800
H1_mix_00089019	chrUn_GL000220v1	+	2671	1	Intergenic	novelGene_1625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGCCCCCGCGTGGGCGGC	NA	False	NA	NA	False	NA	NA	NA	109147	111818	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrUn_GL000220v1_+_109100_111800
H1_mix_00089025	chrUn_GL000220v1	+	979	3	Intergenic	novelGene_1628	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_1	49	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGAAAGCACGGTGTGAACG	NA	False	NA	NA	False	AATAAA	-9	NA	119686	122351	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrUn_GL000220v1_+_120046_121604_121702_121828
H1_mix_00089032	chrX	+	5285	8	FSM	ENSG00000182378.15	ENST00000399012.6	5287	8	2	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	84.6269123016685	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATGAGTATGAATTTTA	NA	False	NA	12	True	AATAAA	-18	NA	276323	303353	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_276395_281481_281685_284166_284315_288732_288870_290647_290777_291498_291655_293034_293219_299096
H1_mix_00089034	chrX	+	1890	9	NNC	ENSG00000182378.15	novel	5287	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	115.665938698478	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATGAGTATGAATTTTA	-7	True	NA	12	True	AATAAA	-18	NA	276352	303353	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_276395_281481_281685_284166_284315_288732_288870_290647_290777_291498_291655_293034_293219_299096_299467_302832
H1_mix_00089035	chrX	+	5326	7	FSM	ENSG00000182378.15	ENST00000381657.8	5318	7	-11	3	-11	0	multi-exon	FALSE	canonical	3	270	junction_1	13.5574907543968	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATGAGTATGAATTTTA	-24	True	NA	12	True	AATAAA	-18	NA	281369	303353	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_281685_284166_284315_288732_288870_290647_290777_291498_291655_293034_293219_299096
H1_mix_00089036	chrX	+	2103	8	NNC	ENSG00000182378.15	novel	5318	7	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_7	73.2270720542113	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGTATGAATTTTATTA	2	True	NA	15	True	AATAAA	-21	NA	281395	303356	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_281685_284166_284315_288732_288870_290647_290777_291498_291655_293034_293219_299096_299393_302592
H1_mix_00089040	chrX	+	391	2	FSM	ENSG00000198223.17	ENST00000477940.6	391	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTAAGCAAGACAGCTCAG	2969	False	NA	NA	False	NA	NA	NA	1285651	1288640	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_1285921_1288518
H1_mix_00089041	chrX	+	3585	3	FSM	ENSG00000236017.8	ENST00000420411.7	697	3	-1969	-919	-1695	22	multi-exon	FALSE	canonical	3	6	junction_1	2.5	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTAGGGTGGGCCCTAA	7006	False	NA	36	True	GATAAA	-45	NA	1400073	1414050	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_1402226_1403460_1403586_1412742
H1_mix_00089042	chrX	+	4466	4	FSM	ENSG00000197976.12	ENST00000381261.8	2187	4	-80	-2199	-59	0	multi-exon	FALSE	canonical	3	422	junction_2	32.4995726467629	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTCCAATGAACTAAAATT	NA	False	NA	3	True	AATAAA	-5	NA	1591544	1602502	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_1591770_1593443_1594225_1595383_1595533_1599191
H1_mix_00089043	chrX	+	3199	5	FSM	ENSG00000197976.12	ENST00000313871.9	3199	5	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_4	61.648195431821	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCACGCTTACGATTTT	-14	True	NA	21	True	AATAAA	-23	NA	1591603	1602520	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_1591770_1593443_1594225_1595383_1595533_1599191_1599433_1600658
H1_mix_00089044	chrX	+	3251	6	FSM	ENSG00000197976.12	ENST00000474361.6	3232	6	-19	0	0	0	multi-exon	FALSE	canonical	3	44	junction_5	202.530590282061	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTCCAATGAACTAAAATT	-14	True	NA	3	True	AATAAA	-5	NA	1591603	1602502	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_1591770_1593443_1594225_1595383_1595533_1599191_1599433_1600137_1600208_1600658
H1_mix_00089045	chrX	+	1290	9	FSM	ENSG00000196433.13	ENST00000381241.9	1330	9	40	0	40	0	multi-exon	TRUE	canonical	0	0	junction_5	4.47213595499958	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTTCTTGTTCTTGGTG	12	True	NA	2	True	AATAAA	-15	NA	1615098	1643081	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_1615269_1623138_1623314_1624268_1624399_1627702_1627772_1629820_1629940_1632703_1632788_1633149_1633291_1636437_1636561_1642802
H1_mix_00089046	chrX	+	1114	9	FSM	ENSG00000223773.8_ENSG00000277120.5	ENST00000685470.1	952	9	-162	0	28	0	multi-exon	FALSE	canonical	3	24	junction_6	24.7862739232826	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGAGTATTGGTGTCAAC	NA	False	NA	15	True	AATAAA	-16	NA	2609218	2638329	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_2609482_2610995_2611039_2612149_2612219_2615815_2615970_2618739_2618785_2619428_2619498_2623384_2623454_2626596_2626643_2637973
H1_mix_00089047	chrX	+	935	4	FSM	ENSG00000223773.8_ENSG00000277120.5	ENST00000431582.6	602	4	-144	-189	13	189	multi-exon	FALSE	canonical	3	99	junction_3	3.55902608401044	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTATCATACGACTTTA	NA	False	NA	NA	False	NA	NA	NA	2609203	2616360	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_2609482_2610995_2611039_2612149_2612219_2615815
H1_mix_00089048	chrX	+	986	10	FSM	ENSG00000223773.8	ENST00000430562.7	1030	10	44	0	0	0	multi-exon	FALSE	canonical	3	67	junction_7	13.2925301588784	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGAGTATTGGTGTCAAC	20	True	NA	15	True	AATAAA	-16	NA	2609391	2638329	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_2609482_2610995_2611039_2612149_2612219_2615815_2615970_2618739_2618785_2619428_2619498_2622689_2622735_2623384_2623454_2626596_2626643_2637973
H1_mix_00089051	chrX	+	1423	10	FSM	ENSG00000002586.20	ENST00000381192.10	1129	10	-313	19	-205	0	multi-exon	FALSE	canonical	3	1218	junction_8	103.855669079738	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAATTAGAAACCAAG	NA	False	NA	-7	True	NA	NA	NA	2690981	2741290	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_2691428_2714421_2714455_2717604_2717653_2719660_2719706_2720355_2720425_2722626_2722675_2723313_2723365_2726259_2726374_2738199_2738257_2740778
H1_mix_00089052	chrX	+	1092	10	FSM	ENSG00000002586.20	ENST00000624481.4	1089	10	-3	0	0	0	multi-exon	FALSE	canonical	3	246	junction_8	400.412287523747	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAATTAGAAACCAAG	15	False	NA	-7	True	NA	NA	NA	2691309	2741290	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_2691428_2714421_2714455_2717604_2717653_2719660_2719706_2720355_2720425_2722626_2722675_2723313_2723365_2726259_2726374_2738202_2738257_2740778
H1_mix_00089053	chrX	+	537	3	NNC	ENSG00000124343.14	novel	2943	11	NA	NA	7041	251	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	2.5	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACGCTTAACCATGTTG	2673	False	NA	NA	False	NA	NA	NA	2801575	2814698	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_2801661_2811335_2811453_2814363
H1_mix_00089054	chrX	+	3323	11	FSM	ENSG00000056998.20	ENST00000398806.8	3192	11	-132	1	-24	0	multi-exon	FALSE	canonical	3	194	junction_9	58.182901268328	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATGTGGCCTCCTTCCA	8	True	NA	27	True	ATTAAA	-13	NA	2828797	2882817	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_2828976_2830060_2830196_2843212_2843355_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2875809_2875915_2877199_2877308_2881051
H1_mix_00089055	chrX	+	3379	11	NNC	ENSG00000056998.20	novel	3192	11	NA	NA	-80	0	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_9	82.3477989991232	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGGCCTCCTTCCAGTG	27	False	NA	30	True	ATTAAA	-16	NA	2828741	2882820	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_2828976_2830060_2830196_2843212_2843355_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2875809_2875915_2877202_2877308_2881051
H1_mix_00089056	chrX	+	3216	11	NNC	ENSG00000056998.20	novel	1293	9	NA	NA	-77	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	116.649260606315	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATGTGGCCTCCTTCCA	195	False	NA	27	True	ATTAAA	-13	NA	2829194	2882817	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_2829269_2830060_2830196_2843212_2843355_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2875809_2875915_2877202_2877308_2881051
H1_mix_00089057	chrX	+	620	5	FSM	ENSG00000056998.20	ENST00000520904.3	624	5	4	0	4	0	multi-exon	FALSE	canonical	3	11	junction_1	157.410887488763	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTTCCAGCCTTCTC	-5	True	NA	NA	False	NA	NA	NA	2829275	2855081	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_2829355_2830060_2830196_2843212_2843355_2853979_2854155_2854992
H1_mix_00089058	chrX	+	6649	11	FSM	ENSG00000101846.9	ENST00000674429.1	6622	11	-27	0	-27	0	multi-exon	FALSE	canonical	2	8	junction_1	4.28952211790544	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTACTTTGTTGAGTAT	-12	True	NA	NA	False	AATAAA	-19	NA	7147684	7354641	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_7148084_7190879_7191009_7253195_7253337_7257241_7257364_7257465_7257589_7259348_7259773_7275950_7276088_7305045_7305184_7325338_7325499_7333985_7334108_7349887
H1_mix_00089060	chrX	+	5863	18	FSM	ENSG00000101849.18	ENST00000645353.2	5818	18	-45	0	-45	0	multi-exon	FALSE	canonical	3	33	junction_3	21.6764506345187	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTTGGTGGGTGTGCTTT	-34	True	NA	10	True	AATAAA	-22	NA	9465012	9719740	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_9465448_9501779_9501850_9640272_9640361_9653544_9653690_9654214_9654323_9684042_9684189_9688016_9688276_9691578_9691712_9692112_9692255_9693148_9693213_9693321_9693420_9697368_9697430_9704992_9705115_9709247_9709323_9709632_9709761_9711610_9711777_9714901_9715004_9716219
H1_mix_00089061	chrX	+	5703	17	NIC	ENSG00000101849.18	novel	5818	18	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_3	17.4641373606027	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTTGGTGGGTGTGCTTT	-19	True	NA	10	True	AATAAA	-22	NA	9465027	9719740	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_9465448_9501779_9501850_9640272_9640361_9654214_9654323_9684042_9684189_9688016_9688276_9691578_9691712_9692112_9692255_9693148_9693213_9693321_9693420_9697368_9697430_9704992_9705115_9709247_9709323_9709632_9709761_9711610_9711777_9714901_9715004_9716219
H1_mix_00089062	chrX	+	7474	10	FSM	ENSG00000146950.13	ENST00000380913.8	7474	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	7.43863786814047	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGATGTCTTTGATTTAC	-5	True	NA	20	True	AATAAA	-20	NA	9786428	9949443	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_9786711_9873651_9873804_9890976_9891109_9894357_9896699_9898189_9898291_9932174_9932871_9937133_9937686_9939194_9939367_9944640_9944914_9946670
H1_mix_00089063	chrX	+	6951	23	NIC	ENSG00000047644.20	novel	6949	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	102	junction_13	16.2191219662278	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTGGAAATGTGTGGCT	0	True	NA	14	True	ATTAAA	-18	NA	10015253	10144474	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_10015859_10063444_10063555_10067286_10067491_10078798_10078876_10079724_10079805_10090770_10090901_10094131_10094282_10098505_10098580_10109777_10110021_10116417_10116508_10117123_10117690_10122618_10122740_10124264_10124340_10125023_10125111_10126113_10126307_10127987_10128162_10128556_10128709_10129955_10130122_10134431_10134597_10136632_10136726_10138708_10138937_10139412_10139541_10141434
H1_mix_00089064	chrX	+	6791	13	FSM	ENSG00000073464.13	ENST00000380833.9	6759	13	-32	0	-32	0	multi-exon	TRUE	canonical	3	6	junction_1	8.0221048775659	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAGAGATACTGATTTCA	-24	True	NA	15	True	AATAAA	-32	NA	10156942	10237660	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_10157101_10158288_10158552_10185021_10185177_10187514_10187615_10194910_10195099_10197938_10198062_10206357_10206565_10206695_10206777_10208044_10208591_10212466_10212654_10213680_10214080_10220660_10220878_10233493
H1_mix_00089065	chrX	+	2291	7	FSM	ENSG00000004961.15	ENST00000321143.8	2277	7	-14	0	-14	0	multi-exon	FALSE	canonical	3	59	junction_1	122.987465485986	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAAAATTTTTTGGAATA	-25	True	NA	12	True	AATAAA	-19	NA	11111286	11123078	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_11111461_11112018_11112161_11114834_11114987_11117266_11117416_11118500_11118621_11120906_11120994_11121611
H1_mix_00089066	chrX	+	2312	7	FSM	ENSG00000004961.15	ENST00000380762.5	2312	7	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_4	35.2156057578013	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTGGAATAATTTTACA	20	True	NA	20	True	AATAAA	-27	NA	11111331	11123086	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_11111519_11112018_11112161_11114834_11114987_11117266_11117416_11118500_11118621_11120906_11120994_11121611
H1_mix_00089067	chrX	+	3374	9	FSM	ENSG00000005302.19	ENST00000337339.7	3480	9	5	101	3	0	multi-exon	FALSE	canonical	3	33	junction_1	13.3082446250435	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATTGGTTGATTGAAGAT	-20	True	NA	-98	True	TATAAA	-30	NA	11758207	11767876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_11758366_11759792_11759876_11760402_11760499_11760836_11760938_11761499_11761583_11762129_11762253_11762836_11762998_11763779_11763939_11765466
H1_mix_00089068	chrX	+	2373	13	FSM	ENSG00000005302.19	ENST00000312196.10	2286	13	-124	37	-46	0	multi-exon	FALSE	canonical	3	33	junction_1	11.7434970184448	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCTTGTTTGAAAGAACC	38	False	NA	-10	True	AATAAA	-3	NA	11758112	11775735	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_11758366_11759792_11759876_11760402_11760499_11760836_11760938_11761499_11761583_11762129_11762253_11762836_11762998_11763779_11763939_11765466_11765730_11768572_11768683_11772155_11772256_11772620_11772706_11774979
H1_mix_00089071	chrX	+	2214	13	FSM	ENSG00000005302.19	ENST00000649602.1	2230	13	16	0	-3	0	multi-exon	FALSE	canonical	3	16	junction_1	15.7347810068438	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTTGTTTGAAAGAACCA	923	False	NA	-9	True	AATAAA	-4	NA	11759619	11775736	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_11759713_11759792_11759876_11760402_11760499_11760836_11760938_11761499_11761583_11762129_11762253_11762836_11762998_11763779_11763939_11765466_11765730_11768572_11768683_11772155_11772256_11772620_11772706_11774979
H1_mix_00089072	chrX	+	2311	12	FSM	ENSG00000005302.19	ENST00000649078.1	2507	12	196	0	-3	0	multi-exon	FALSE	canonical	3	54	junction_10	7.46008663233769	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGAGAGAGAGTTTTCAC	923	False	NA	8	True	AATAAA	-21	NA	11759619	11775753	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_11759876_11760402_11760499_11760836_11760938_11761499_11761583_11762129_11762253_11762836_11762998_11763779_11763939_11765466_11765730_11768572_11768683_11772155_11772256_11772620_11772706_11774979
H1_mix_00089073	chrX	+	2507	7	FSM	ENSG00000101911.13	ENST00000380668.10	2469	7	-38	0	19	0	multi-exon	FALSE	canonical	3	117	junction_2	9.53356643071673	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTGTATGTATCATTGT	-21	True	NA	9	True	AATAAA	-20	NA	12791373	12824222	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_12791620_12799206_12799391_12809233_12809333_12810021_12810147_12819506_12819681_12820643_12820804_12822703
H1_mix_00089074	chrX	+	2798	7	FSM	ENSG00000101911.13	ENST00000398491.6	1348	7	-32	-1418	19	282	multi-exon	FALSE	canonical	3	8	junction_2	46.3983356981213	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGAGTAGTGATGTTCAA	-21	True	NA	15	True	ATTAAA	-22	NA	12791373	12824504	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_12791620_12799206_12799400_12809233_12809333_12810021_12810147_12819506_12819681_12820643_12820804_12822703
H1_mix_00089075	chrX	+	646	3	FSM	ENSG00000205542.11	ENST00000451311.7	622	3	-24	0	-24	0	multi-exon	FALSE	canonical	3	36504	junction_2	237.5	2736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTAGCTGGTGTGTCTGTTT	-16	True	NA	27	True	AATAAA	-12	NA	12975085	12977223	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_12975169_12976245_12976362_12976776
H1_mix_00089076	chrX	+	1726	2	FSM	ENSG00000205542.11	ENST00000380636.1	1702	2	-24	0	-24	0	multi-exon	FALSE	canonical	3	36504	junction_1	0	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGGTGTGTCTGTTTGGT	-16	True	NA	30	True	AATAAA	-15	NA	12975085	12977226	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_12976362_12976776
H1_mix_00089077	chrX	+	767	3	FSM	ENSG00000205542.11	ENST00000380635.5	767	3	0	0	0	0	multi-exon	FALSE	canonical	3	1089	junction_1	17707.5	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTGTGTCTGTTTGGTT	20	False	NA	31	True	AATAAA	-16	NA	12975243	12977227	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_12975444_12976245_12976362_12976776
H1_mix_00089078	chrX	+	2394	12	FSM	ENSG00000198759.12	ENST00000380602.3	2385	12	-9	0	-9	0	multi-exon	FALSE	canonical	1	1	junction_1	3.4473609501561	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGTCATGGTTTAATT	0	True	NA	4	True	TTTAAA	-31	NA	13569612	13633575	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_13569936_13589555_13589669_13594835_13594929_13599974_13600095_13603316_13603437_13606378_13606514_13608323_13608447_13617729_13618054_13619162_13619244_13623820_13623926_13627010_13627277_13632984
H1_mix_00089079	chrX	+	2391	12	FSM	ENSG00000198759.12	ENST00000361306.6	2403	12	12	0	-9	0	multi-exon	FALSE	canonical	1	1	junction_1	3.25500250726694	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGTCATGGTTTAATT	0	True	NA	4	True	TTTAAA	-31	NA	13569612	13633575	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_13569936_13589555_13589669_13594835_13594929_13599974_13600095_13603316_13603437_13606378_13606514_13608323_13608447_13617729_13618054_13619162_13619244_13623823_13623926_13627010_13627277_13632984
H1_mix_00089080	chrX	+	2482	3	FSM	ENSG00000123595.8	ENST00000464506.2	2034	3	-22	-426	-22	426	multi-exon	FALSE	canonical	3	161	junction_2	9.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGACTCCACCTCAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13689105	13710930	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_13689289_13703813_13703903_13708720
H1_mix_00089081	chrX	+	393	3	FSM	ENSG00000123595.8	ENST00000243325.6	393	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	74.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACAGATATGTAACTAATA	19	True	NA	NA	False	TTTAAA	-45	NA	13689160	13708817	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_13689289_13703734_13703903_13708720
H1_mix_00089082	chrX	+	2338	2	FSM	ENSG00000123595.8	ENST00000618931.2	737	2	-25	-1576	0	426	multi-exon	FALSE	canonical	3	99	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGACTCCACCTCAAAAAAA	19	True	NA	NA	False	NA	NA	NA	13689160	13710930	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_13689289_13708720
H1_mix_00089083	chrX	+	4309	23	FSM	ENSG00000046651.16	ENST00000682237.1	4259	23	-92	42	-74	0	multi-exon	FALSE	canonical	3	10	junction_10	30.7407514815902	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTATTTCTCATTCATTAT	NA	False	NA	-37	True	NA	NA	NA	13734668	13769311	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_13735084_13735247_13735347_13736477_13736679_13738845_13738915_13739001_13739033_13744414_13744520_13746318_13746456_13746779_13746954_13749426_13749534_13751248_13751369_13752703_13753442_13755150_13755243_13756577_13756768_13757659_13757791_13758336_13758449_13760114_13760721_13761084_13761212_13762343_13762445_13763744_13763856_13767126_13767285_13768053_13768225_13768717_13768786_13769065
H1_mix_00089084	chrX	+	3617	23	FSM	ENSG00000046651.16	ENST00000340096.11	3612	23	-5	0	0	0	multi-exon	FALSE	canonical	3	60	junction_9	25.147170124872	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTTTTGTCTTAAATTT	1	True	NA	9	True	AATAAA	-21	NA	13734742	13769357	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_13735084_13735247_13735347_13736477_13736679_13738845_13738915_13739001_13739033_13744414_13744520_13746318_13746456_13746779_13746954_13749426_13749534_13751248_13751369_13753367_13753442_13755150_13755243_13756577_13756768_13757659_13757791_13758336_13758449_13760114_13760721_13761084_13761212_13762343_13762445_13763744_13763856_13767126_13767285_13768053_13768225_13768717_13768786_13769065
H1_mix_00089085	chrX	+	6585	21	FSM	ENSG00000046651.16	ENST00000464463.6	6615	21	0	30	0	-30	multi-exon	FALSE	canonical	3	23	junction_9	28.4697646635865	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACAGATTTGATTTCCAT	2	True	NA	NA	False	AATAAA	-11	NA	13734788	13770825	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_13735084_13735247_13735347_13736477_13736679_13738845_13738915_13739001_13739033_13744414_13744520_13746318_13746456_13746779_13746954_13749426_13749534_13753367_13753442_13755150_13755243_13756577_13756768_13757659_13757791_13758336_13760721_13761084_13761212_13762343_13762445_13763744_13763856_13767126_13767285_13768053_13768225_13768717_13768786_13769065
H1_mix_00089086	chrX	+	3392	22	NIC	ENSG00000046651.16	novel	3612	23	NA	NA	4	43	intron_retention	FALSE	canonical	3	42	junction_18	26.6362070938163	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTGAACCAAGAATAATCTA	23	True	NA	61	True	NA	NA	NA	13734764	13769265	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_13735084_13735247_13735347_13736477_13736679_13738845_13738915_13739001_13739033_13744414_13744520_13746318_13746456_13746779_13746954_13749426_13749534_13751248_13751369_13753367_13753442_13755150_13755243_13756577_13756768_13757659_13757791_13758336_13758449_13760114_13760721_13761084_13761212_13762343_13762445_13767126_13767285_13768053_13768225_13768717_13768786_13769065
H1_mix_00089087	chrX	+	3296	22	FSM	ENSG00000046651.16	ENST00000380550.6	3296	22	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_9	28.4687042237859	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTATTTCTCATTCATTAT	4	True	NA	-37	True	NA	NA	NA	13734897	13769311	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_13735084_13735247_13735347_13736477_13736679_13738845_13738915_13739001_13739033_13744414_13744520_13746318_13746456_13746779_13746954_13749426_13749534_13753367_13753442_13755150_13755243_13756577_13756768_13757659_13757791_13758336_13758449_13760114_13760721_13761084_13761212_13762343_13762445_13763744_13763856_13767126_13767285_13768053_13768225_13768717_13768786_13769065
H1_mix_00089089	chrX	+	423	1	FSM	ENSG00000233247.3	ENST00000411687.1	547	1	-124	248	-124	-248	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGTCAGGGAGTCATCT	NA	False	NA	NA	False	NA	NA	NA	14244257	14244680	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_14244300_14244700
H1_mix_00089090	chrX	+	4183	15	FSM	ENSG00000130150.12	ENST00000380492.8	4183	15	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_9	8.83984485965999	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTGGTCTCTAATTGATA	-15	True	NA	NA	False	AATAAA	-18	NA	14873420	14922327	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_14873538_14873688_14873759_14892722_14892879_14895307_14895395_14897083_14897239_14900574_14900636_14902965_14903005_14908859_14908985_14911236_14911414_14912248_14912362_14914502_14914600_14915667_14915765_14916196_14916327_14918679_14918783_14919671
H1_mix_00089091	chrX	+	1022	3	FSM	ENSG00000130150.12	ENST00000461777.1	748	3	0	-274	0	274	multi-exon	FALSE	canonical	3	78	junction_1	1.5	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTGAAGTGACTTCAATC	4	True	NA	NA	False	CATAAA	-30	NA	14873490	14893627	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_14873538_14873688_14873759_14892722
H1_mix_00089092	chrX	+	1888	4	NNC	ENSG00000186312.10	novel	1264	4	NA	NA	-63	0	intron_retention	FALSE	canonical	1	2	junction_3	63.4192399828317	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTGTCTTTATTATCATA	25	True	NA	NA	False	AATAAA	-21	NA	15675482	15703724	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_15675779_15688660_15688859_15692962_15693059_15702426
H1_mix_00089093	chrX	+	1264	4	FSM	ENSG00000186312.10	ENST00000380334.6	1264	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	39.6316371938716	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTGTCTTTATTATCATA	88	False	NA	NA	False	AATAAA	-21	NA	15675545	15703724	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_15675573_15688660_15688859_15692962_15693059_15702781
H1_mix_00089095	chrX	+	6843	4	NIC	ENSG00000186312.10	novel	926	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	79	junction_3	28.6744175568088	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTGTCTTTATTATCATA	-2	True	NA	NA	False	AATAAA	-21	NA	15675714	15703724	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_15675779_15688660_15688859_15692962_15693059_15697239
H1_mix_00089096	chrX	+	1198	3	NIC	ENSG00000186312.10	novel	926	4	NA	NA	6	-1	combination_of_known_splicesites	FALSE	canonical	3	30	junction_2	59.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGGTGTCTTTATTATCAT	4	True	NA	NA	False	AATAAA	-20	NA	15675720	15703723	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_15675779_15688660_15688859_15702781
H1_mix_00089097	chrX	+	6832	8	FSM	ENSG00000169239.13	ENST00000318636.8	6837	8	-2	7	-2	-7	multi-exon	FALSE	canonical	2	11	junction_1	1.77281052085584	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGAACTATTATTACTAT	-24	True	NA	-3	True	AATAAA	-12	NA	15738267	15788404	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_15738353_15749970_15750166_15764577_15764776_15772495_15772615_15774301_15774398_15775245_15775309_15776713_15776870_15782484
H1_mix_00089100	chrX	+	1498	11	FSM	ENSG00000169249.14	ENST00000307771.8	1479	11	-19	0	-6	0	multi-exon	FALSE	canonical	3	93	junction_10	18.762729012593	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGTATATCTTATTTAT	-9	True	NA	12	True	AATAAA	-18	NA	15790464	15823260	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_15790537_15790933_15791014_15799871_15799954_15803687_15803797_15804110_15804198_15808232_15808272_15809199_15809319_15815676_15815891_15818586_15818643_15820206_15820317_15822730
H1_mix_00089101	chrX	+	8720	3	FSM	ENSG00000126010.6	ENST00000380289.3	2417	3	8	-6311	8	6311	multi-exon	FALSE	canonical	3	55	junction_1	4.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTTACGCATATGCGAA	8	True	NA	NA	False	NA	NA	NA	16123572	16159829	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_16124367_16150304_16150657_16152255
H1_mix_00089102	chrX	+	2611	2	Intergenic	novelGene_1652	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	92	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTTTAAAAAATTTGTA	46	False	NA	58	True	NA	NA	NA	16577156	16584049	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_16577286_16581567
H1_mix_00089103	chrX	+	6153	9	FSM	ENSG00000169895.6	ENST00000380155.4	6153	9	0	0	0	0	multi-exon	FALSE	canonical	3	591	junction_1	33.9926462635671	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTATAATGGTTGTTCC	-14	True	NA	8	True	AATAAA	-27	NA	16719611	16765340	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_16719900_16735226_16735346_16736165_16736233_16741715_16741790_16743700_16743841_16754944_16755094_16756662_16756722_16757161_16757310_16760231
H1_mix_00089104	chrX	+	4362	10	FSM	ENSG00000086712.13	ENST00000380122.10	4362	10	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_8	19.3779816503037	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTCTGTGTATTCTTTC	10	True	NA	104	True	AGTAAA	-19	NA	16786465	16844519	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_16786590_16818573_16818878_16820163_16820256_16828093_16828265_16829575_16829771_16832622_16832743_16834282_16834358_16837592_16837686_16839820_16839917_16841427
H1_mix_00089105	chrX	+	7943	18	FSM	ENSG00000169891.18	ENST00000357277.8	7978	18	35	0	35	0	multi-exon	FALSE	canonical	1	3	junction_3	5.19914818681985	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGGTTTTATGGAGTCT	-12	True	NA	19	True	AATAAA	-15	NA	16946692	17153272	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_16947135_17006220_17006345_17022122_17022272_17025058_17025186_17029525_17029624_17047346_17047483_17052381_17052446_17054807_17054951_17062437_17062533_17068401_17068472_17069939_17069994_17074113_17074160_17077270_17077408_17103717_17103780_17133823_17133908_17135260_17135407_17138855_17138962_17147412
H1_mix_00089106	chrX	+	329	3	FSM	ENSG00000188158.17	ENST00000485305.1	409	3	80	0	80	0	multi-exon	FALSE	canonical	2	3	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATTGAGGAGGAGGAAA	NA	False	NA	NA	False	NA	NA	NA	17719342	17724370	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_17719407_17721440_17721634_17724298
H1_mix_00089107	chrX	+	2695	6	FSM	ENSG00000047634.15	ENST00000380045.7	2679	6	-16	0	3	0	multi-exon	FALSE	canonical	3	10	junction_1	1.72046505340853	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAAGCCTCAGATGTGAT	-19	True	NA	12	True	AATAAA	-20	NA	17737451	17754985	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_17737681_17746017_17746099_17749399_17749505_17749893_17750294_17751814_17751967_17753257
H1_mix_00089108	chrX	+	2699	6	FSM	ENSG00000047634.15	ENST00000398080.5	2704	6	3	2	3	1	multi-exon	TRUE	canonical	2	3	junction_1	4.1182520563948	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGCCTCAGATGTGATT	-19	True	NA	13	True	AATAAA	-21	NA	17737451	17754986	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_17737681_17746014_17746099_17749399_17749505_17749893_17750294_17751814_17751967_17753257
H1_mix_00089109	chrX	+	14379	18	FSM	ENSG00000008086.13	ENST00000623535.2	14572	18	7	186	7	-186	multi-exon	FALSE	canonical	0	0	junction_1	1.42396687493061	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGAGTGTTGGCTGATGG	6	True	NA	NA	False	NA	NA	NA	18425614	18640010	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_18425696_18506934_18507161_18510819_18510855_18564476_18564523_18575353_18575491_18579847_18579969_18581890_18581951_18584262_18584354_18587953_18588144_18595347_18595429_18598461_18598614_18603901_18604869_18608810_18608913_18609464_18609571_18613151_18613276_18619866_18619967_18625127_18625248_18628370
H1_mix_00089110	chrX	+	621	5	ISM	ENSG00000086717.19	ENST00000471570.6	2632	17	268	77712	266	-39248	5prime_fragment	FALSE	canonical	1	1	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGGAAGCAGATGCTG	261	False	NA	NA	False	NA	NA	NA	18700332	18749952	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_18700436_18707658_18707827_18730180_18730309_18733747_18733809_18749791
H1_mix_00089111	chrX	+	958	1	FSM	ENSG00000224224.1	ENST00000439908.1	784	1	1	-175	1	175	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATCGTTTTCATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	18865771	18866729	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_18865800_18866700
H1_mix_00089112	chrX	+	478	2	FSM	ENSG00000286724.1	ENST00000658230.1	1340	2	-42	904	-42	-904	multi-exon	FALSE	canonical	1	1	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGTCTTTCTTTCCAAA	NA	False	NA	NA	False	AATAGA	-15	NA	19050775	19051975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_19050982_19051703
H1_mix_00089113	chrX	+	3340	11	FSM	ENSG00000131828.14	ENST00000422285.7	3349	11	-21	30	13	-17	multi-exon	FALSE	canonical	3	1112	junction_1	98.6470475990032	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGTGAAAAAGAGATGAAT	-45	True	NA	46	True	AATAAA	-21	NA	19343905	19361688	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_19344095_19349311_19349372_19349936_19350111_19351280_19351408_19353081_19353174_19354490_19354584_19355348_19355505_19355685_19355758_19357651_19357720_19358915_19359025_19359488
H1_mix_00089114	chrX	+	3254	10	FSM	ENSG00000131828.14	ENST00000540249.5	3277	10	13	10	13	-10	multi-exon	FALSE	canonical	3	104	junction_5	400.103042283415	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAGATGAATTAACCCT	-45	True	NA	53	True	AATAAA	-28	NA	19343905	19361695	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_19344095_19349311_19349372_19349936_19350111_19351280_19351408_19353081_19353174_19355348_19355505_19355685_19355758_19357651_19357720_19358915_19359025_19359488
H1_mix_00089115	chrX	+	3461	12	FSM	ENSG00000131828.14	ENST00000379806.9	3484	12	13	10	13	-10	multi-exon	FALSE	canonical	3	29	junction_1	502.774566244962	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAGATGAATTAACCCT	-45	True	NA	53	True	AATAAA	-28	NA	19343905	19361695	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_19344095_19346509_19346624_19349311_19349372_19349936_19350111_19351280_19351408_19353081_19353174_19354490_19354584_19355348_19355505_19355685_19355758_19357651_19357720_19358915_19359025_19359488
H1_mix_00089118	chrX	+	2187	3	FSM	ENSG00000131828.14	ENST00000478795.1	791	3	-1384	-12	416	0	multi-exon	FALSE	canonical	3	1347	junction_2	68	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAAGATTATTTTTGACT	277	False	NA	16	True	ATTAAA	-18	NA	19355997	19359844	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_19357720_19358915_19359025_19359488
H1_mix_00089119	chrX	+	5800	21	FSM	ENSG00000149970.16	ENST00000425654.7	5669	21	-137	6	-17	0	multi-exon	FALSE	canonical	3	26	junction_9	13.3546808273354	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTATAAAGCACCTACTT	38	False	NA	7	True	AATAAA	-17	NA	21374280	21654689	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_21374962_21426496_21426661_21432611_21432815_21440693_21440782_21470765_21470808_21490458_21490579_21497786_21497847_21501519_21501589_21516484_21516632_21526866_21527001_21531855_21532068_21563237_21563453_21590571_21590621_21591021_21591195_21594973_21595048_21595323_21595396_21601281_21601350_21606778_21606880_21609070_21609618_21648830_21649028_21652305
H1_mix_00089120	chrX	+	5805	22	FSM	ENSG00000149970.16	ENST00000379510.5	5753	22	-191	139	-71	0	multi-exon	FALSE	canonical	3	24	junction_11	14.6696039112024	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAAGACTCGTGGCTAGCC	5	False	NA	12	True	ATTAAA	-12	NA	21374226	21654550	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_21374962_21426496_21426661_21432611_21432815_21440693_21440782_21470765_21470808_21490458_21490579_21497786_21497847_21501519_21501589_21516484_21516632_21526866_21527001_21531855_21532068_21561470_21561561_21563237_21563453_21590571_21590621_21591021_21591195_21594973_21595048_21595323_21595396_21601281_21601350_21606778_21606880_21609070_21609618_21648830_21649028_21652305
H1_mix_00089121	chrX	+	5532	6	FSM	ENSG00000149970.16	ENST00000644832.1	3808	6	-111	-1613	13	-849	multi-exon	FALSE	canonical	3	62	junction_5	4.02988833592198	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCTTGACTACATTGTGA	20	False	NA	NA	False	NA	NA	NA	21374310	21494842	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_21374962_21426496_21426661_21432611_21432815_21440693_21440782_21470765_21470808_21490458
H1_mix_00089122	chrX	+	4223	20	FSM	ENSG00000149970.16	ENST00000543067.6	4220	20	-3	0	0	0	multi-exon	FALSE	canonical	3	6	junction_19	18.6412404328507	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGATCTTTTCAGATAGCT	-4	True	NA	NA	False	AATAAA	-18	NA	21374417	21642730	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_21374962_21426496_21426661_21432611_21432815_21440693_21440782_21470765_21470808_21490458_21490579_21497786_21497847_21501519_21501589_21526866_21527001_21531855_21532068_21561470_21561561_21563237_21563453_21590571_21590621_21591021_21591195_21594973_21595048_21595323_21595396_21601281_21601350_21606778_21606880_21609070_21609618_21641532
H1_mix_00089124	chrX	+	4467	11	FSM	ENSG00000012174.12	ENST00000379484.10	4446	11	-6	-15	-6	15	multi-exon	FALSE	canonical	3	64	junction_2	10.3653268158799	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTTTTGAAACTCTTT	-12	True	NA	35	True	AATAAA	-39	NA	21839610	21885438	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_21839810_21843169_21843319_21845170_21845385_21851508_21851613_21853375_21853504_21868466_21868586_21869497_21869679_21878041_21878137_21878496_21878693_21880896_21880973_21882432
H1_mix_00089125	chrX	+	3878	7	FSM	ENSG00000012174.12	ENST00000365779.2	4457	7	0	579	0	-579	multi-exon	FALSE	canonical	3	64	junction_2	11.0867789130417	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTCAAGCCCTGGGC	-9	True	NA	NA	False	NA	NA	NA	21839653	21872505	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_21839810_21843169_21843319_21845170_21845385_21851508_21851613_21853375_21853504_21868466_21868586_21869497
H1_mix_00089126	chrX	+	1855	1	FSM	ENSG00000230797.3	ENST00000429584.3	2754	1	-11	910	-11	-910	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACTATTTTTGTAAAGTT	31	False	NA	NA	False	NA	NA	NA	21855975	21857830	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_21856000_21857800
H1_mix_00089127	chrX	+	1771	9	FSM	ENSG00000102172.16	ENST00000379404.5	1174	9	-233	-364	-227	0	multi-exon	FALSE	canonical	0	0	junction_4	680.826324678328	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGTGTTCTGTCGTTT	NA	False	NA	15	True	ATTAAA	-16	NA	21940481	21994837	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_21940874_21967195_21967317_21977060_21977237_21977959_21978115_21978876_21978967_21984303_21984419_21985143_21985224_21992596_21992713_21994311
H1_mix_00089128	chrX	+	1911	11	FSM	ENSG00000102172.16	ENST00000404933.7	1703	11	-208	0	-208	0	multi-exon	FALSE	canonical	0	0	junction_6	480.817231388394	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGTGTTCTGTCGTTT	NA	False	NA	15	True	ATTAAA	-16	NA	21940500	21994837	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_21940874_21967195_21967317_21971896_21971991_21972506_21972572_21977060_21977237_21977959_21978115_21978876_21978967_21984303_21984419_21985143_21985224_21992596_21992713_21994311
H1_mix_00089131	chrX	+	363	1	FSM	ENSG00000226774.1	ENST00000445047.1	438	1	103	-28	103	28	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAAATTTGTCATGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	23351115	23351478	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_23351100_23351500
H1_mix_00089132	chrX	+	661	4	FSM	ENSG00000123131.13	ENST00000379349.5	815	4	154	0	154	0	multi-exon	FALSE	canonical	1	1	junction_1	1302.32791569558	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCTTTCAGTGGTTTTAT	122	False	NA	NA	False	NA	NA	NA	23664415	23679287	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_23664719_23671528_23671647_23674989_23675107_23679164
H1_mix_00089133	chrX	+	956	7	FSM	ENSG00000123131.13	ENST00000379341.9	956	7	0	0	0	0	multi-exon	FALSE	canonical	3	2342	junction_6	326.478006746073	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTGTTGCAGTAGTAAT	-5	True	NA	18	True	AATAAA	-20	NA	23667492	23686397	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_23667812_23671528_23671647_23674989_23675107_23679164_23679288_23682395_23682527_23683670_23683706_23686284
H1_mix_00089135	chrX	+	1049	6	FSM	ENSG00000130066.17	ENST00000379270.5	1049	6	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_3	36.351616195157	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGGTGTAAGCATTTT	1	True	NA	23	True	AATAAA	-17	NA	23783172	23786210	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_23783418_23783657_23783710_23783799_23783884_23785327_23785430_23785519_23785561_23785685
H1_mix_00089136	chrX	+	1220	7	FSM	ENSG00000130066.17	ENST00000489394.5	1135	7	-85	0	-61	0	multi-exon	FALSE	canonical	3	10	junction_3	229.644411113259	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGGTGTAAGCATTTT	995	False	NA	23	True	AATAAA	-17	NA	23783111	23786210	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_23783418_23783657_23783710_23783799_23783884_23784293_23784404_23785327_23785430_23785519_23785561_23785685
H1_mix_00089137	chrX	+	1174	3	FSM	ENSG00000130066.17	ENST00000474223.1	1033	3	69	-210	69	0	multi-exon	FALSE	canonical	3	462	junction_2	18	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGGTGTAAGCATTTT	233	False	NA	23	True	AATAAA	-17	NA	23784821	23786210	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_23785430_23785519_23785561_23785685
H1_mix_00089138	chrX	+	3558	12	FSM	ENSG00000130741.11	ENST00000253039.9	3457	12	0	-101	0	101	multi-exon	FALSE	canonical	3	1052	junction_4	136.448700740917	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAAACCAGAATTCTATT	5	True	NA	126	True	AATATA	-27	NA	24054955	24078911	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_24055038_24055614_24055679_24057420_24057549_24057632_24057755_24060087_24060183_24062415_24062575_24064200_24064336_24065997_24066093_24067963_24068109_24071557_24071728_24073090_24073264_24076721
H1_mix_00089139	chrX	+	453	2	FSM	ENSG00000130741.11	ENST00000460032.1	453	2	0	0	0	0	multi-exon	FALSE	canonical	3	1256	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATACAAAAAATTAGC	NA	False	NA	NA	False	NA	NA	NA	24071712	24073528	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_24071728_24073090
H1_mix_00089141	chrX	+	7445	8	NIC	ENSG00000005889.16	novel	7612	10	NA	NA	0	54	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	9.42207568448066	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACTCACTCCATGAAGT	-14	True	NA	NA	False	NA	NA	NA	24149728	24216309	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_24149795_24172714_24172801_24179182_24179771_24207325_24207476_24207711_24207856_24208217_24208371_24208899_24209041_24210192
H1_mix_00089143	chrX	+	1741	11	FSM	ENSG00000067992.17	ENST00000379162.9	1741	11	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_7	21.6785608378416	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTATGATTCCACTTATGT	10	True	NA	6	True	AATAAA	-20	NA	24465285	24534422	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_24465562_24494741_24494884_24498828_24498901_24503326_24503512_24505208_24505299_24518932_24519011_24526197_24526275_24527573_24527676_24528075_24528187_24531656_24531771_24533928
H1_mix_00089144	chrX	+	12720	12	FSM	ENSG00000067992.17	ENST00000568479.2	12720	12	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_11	27.902723585182	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCGTCACTGTGGTGTT	10	True	NA	17	True	AATAAA	-18	NA	24465285	24550466	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_24465562_24494741_24494884_24498828_24498901_24503326_24503512_24505208_24505299_24518932_24519011_24526197_24526275_24527573_24527676_24528075_24528187_24531656_24531771_24533928_24534069_24539133
H1_mix_00089145	chrX	+	1406	12	FSM	ENSG00000101868.13	ENST00000678847.1	1803	12	0	397	0	-397	multi-exon	FALSE	canonical	3	136	junction_11	11.7431182590605	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTATTTGGCGATGATT	NA	False	NA	NA	False	TATAAA	-22	NA	24693872	24724451	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_24694005_24699424_24699550_24703250_24703348_24704388_24704470_24714553_24714670_24715140_24715204_24716361_24716455_24716883_24716972_24717289_24717492_24717579_24717759_24723154_24723268_24724334
H1_mix_00089146	chrX	+	5487	37	FSM	ENSG00000101868.13	ENST00000379068.8	5487	37	0	0	0	0	multi-exon	TRUE	canonical	3	128	junction_20	19.7584760683411	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTGTGGTGAATCCTTA	-2	True	NA	24	True	AATAAA	-17	NA	24693917	24996986	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_24694005_24699424_24699550_24703250_24703348_24704388_24704470_24714553_24714670_24715140_24715204_24716361_24716455_24716883_24716972_24717289_24717492_24717579_24717759_24723154_24723268_24724334_24724452_24725980_24726056_24726932_24727072_24727781_24727937_24732369_24732455_24733754_24733817_24735398_24735489_24737624_24737742_24739374_24739551_24741374_24741505_24742001_24742122_24743229_24743330_24745417_24745543_24748310_24748461_24748869_24748993_24809897_24809931_24810707_24810801_24812657_24812864_24814978_24815112_24821451_24821584_24826426_24826602_24841651_24841831_24843545_24843678_24888005_24888123_24930452_24930550_24995804
H1_mix_00089147	chrX	+	231	2	Intergenic	novelGene_1655	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATCCATATTGCAATT	NA	False	NA	NA	False	NA	NA	NA	27485916	27515377	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_27485949_27515178
H1_mix_00089148	chrX	+	1759	2	FSM	ENSG00000214107.9	ENST00000397548.4	1718	2	-43	2	-43	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTACTTGTTCAGTGGCTC	3321	False	NA	NA	False	AATAAA	-14	NA	30247102	30252038	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_30247257_30250433
H1_mix_00089149	chrX	+	342	1	FSM	ENSG00000232368.1	ENST00000431458.1	528	1	-61	247	-61	-247	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACACCATGAAAGCCGCCA	141	False	NA	NA	False	NA	NA	NA	30630236	30630578	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_30630200_30630600
H1_mix_00089150	chrX	+	3707	20	FSM	ENSG00000198814.14	ENST00000378943.7	3707	20	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_8	20.8200308407679	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCATTTCTCATTTACAG	535	False	NA	NA	False	AATAAA	-18	NA	30653358	30730608	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_30653616_30665510_30665585_30668011_30668119_30677374_30677453_30691122_30691200_30694399_30694538_30696041_30696152_30696616_30696684_30700413_30700450_30700837_30700906_30707555_30707599_30708053_30708135_30718537_30718617_30719418_30719516_30720010_30720096_30720620_30720742_30720851_30720996_30724100_30724182_30727465_30727553_30728731
H1_mix_00089151	chrX	+	4515	21	FSM	ENSG00000198814.14	ENST00000427190.6	4515	21	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_9	13.9481181526398	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGTGAATTTGTAAATCA	14	True	NA	NA	False	AATAAA	-16	NA	30653422	30731462	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_30653616_30665510_30665585_30668011_30668119_30677374_30677453_30691122_30691200_30694399_30694538_30696041_30696152_30696616_30696684_30697731_30697750_30700413_30700450_30700837_30700906_30707555_30707599_30708053_30708135_30718537_30718617_30719418_30719516_30720010_30720096_30720620_30720742_30720851_30720996_30724100_30724182_30727465_30727553_30728731
H1_mix_00089152	chrX	+	587	6	FSM	ENSG00000198814.14	ENST00000487652.5	565	6	-22	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	35.9310450724718	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGATCTATGGCCTAAT	69	False	NA	NA	False	NA	NA	NA	30653477	30696662	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_30653616_30677374_30677453_30691122_30691200_30694399_30694538_30696041_30696152_30696616
H1_mix_00089153	chrX	+	2063	19	FSM	ENSG00000198814.14	ENST00000378945.7	2063	19	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_18	27.4298206652613	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGCTCTTTGCTTTTAAC	69	False	NA	NA	False	ATTAAA	-27	NA	30653477	30729170	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_30653616_30665510_30665585_30668011_30668119_30677374_30677453_30691122_30691200_30694399_30694538_30696041_30696152_30696616_30696684_30700413_30700450_30700837_30700906_30707555_30707599_30708053_30708135_30718537_30718617_30719418_30719516_30720010_30720096_30720620_30720742_30720851_30720996_30724100_30724182_30728731
H1_mix_00089154	chrX	+	602	1	FSM	ENSG00000226781.1	ENST00000436520.1	327	1	-90	-185	-90	185	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTGATGTGTGGTTTATAT	19	False	NA	11	True	AATAAA	-27	NA	33041304	33041906	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_33041300_33041900
H1_mix_00089155	chrX	+	227	1	FSM	ENSG00000235510.1	ENST00000421222.1	227	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGGCCCGGCGCACCGC	NA	False	NA	NA	False	NA	NA	NA	36957912	36958139	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_36957900_36958100
H1_mix_00089156	chrX	+	671	3	FSM	ENSG00000130962.18	ENST00000491253.1	650	3	-21	0	-21	0	multi-exon	FALSE	canonical	2	3	junction_2	19.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTTTAAAATACTAATGG	-42	True	NA	NA	False	AATGAA	-26	NA	37349287	37453647	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_37349396_37406208_37406260_37453135
H1_mix_00089157	chrX	+	4476	4	FSM	ENSG00000130962.18	ENST00000378628.9	4400	4	-76	0	-21	0	multi-exon	FALSE	canonical	3	39	junction_3	5.09901951359278	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATTTTTTTTCTGCCATG	-42	True	NA	25	True	AATAAA	-18	NA	37349287	37457291	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_37349396_37406208_37406260_37425839_37426001_37453135
H1_mix_00089158	chrX	+	546	1	FSM	ENSG00000241607.1	ENST00000413104.1	546	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGAGCCAAGATGGGCCC	NA	False	NA	NA	False	NA	NA	NA	37441522	37442068	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_37441500_37442100
H1_mix_00089159	chrX	+	5300	3	FSM	ENSG00000047597.7	ENST00000378616.5	5174	3	-134	8	-134	-8	multi-exon	TRUE	canonical	2	3	junction_1	1.5	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTATTTCATTCTTTA	77	False	NA	9	True	AATAAA	-44	NA	37685656	37732122	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_37686207_37694285_37694549_37727635
H1_mix_00089160	chrX	+	4633	16	ISM	ENSG00000147041.12	ENST00000297875.7	4751	17	26978	5	-3	-5	3prime_fragment	FALSE	canonical	0	0	junction_7	2.87054001888146	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACTCATTCTGTCTTCA	NA	False	NA	4	True	AATAAA	-17	NA	38033530	38128811	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_38034009_38054212_38054423_38072046_38072163_38073589_38073699_38076566_38076702_38089445_38089588_38094294_38094425_38096133_38096235_38102341_38102435_38106592_38106772_38108599_38108700_38110320_38110483_38120357_38120467_38122079_38122216_38125297_38125507_38126587
H1_mix_00089161	chrX	+	1742	8	FSM	ENSG00000156298.13	ENST00000378482.7	1742	8	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_5	24.7839645327212	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTCTGGTTCTGTTC	0	True	NA	NA	False	AATAAA	-18	NA	38561541	38688918	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_38561628_38666120_38666310_38671375_38671451_38674220_38674317_38675704_38675861_38681203_38681288_38687598_38687675_38687938
H1_mix_00089162	chrX	+	4795	2	FSM	ENSG00000165175.17	ENST00000336949.7	4814	2	10	9	6	-4	multi-exon	FALSE	canonical	3	435	junction_1	0	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTAAATTTTGTGTTCT	2	True	NA	23	True	AATAAA	-25	NA	38801464	38806528	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_38804414_38804682
H1_mix_00089163	chrX	+	3805	3	FSM	ENSG00000165175.17	ENST00000614558.3	3758	3	-51	4	-32	-4	multi-exon	FALSE	canonical	3	18	junction_1	208.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTAAATTTTGTGTTCT	NA	False	NA	23	True	AATAAA	-25	NA	38801407	38806528	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_38801488_38802534_38804414_38804682
H1_mix_00089164	chrX	+	1962	8	FSM	ENSG00000182220.15	ENST00000636409.1	1962	8	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	330.479676117202	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACCAATGTCTATCAAGAG	NA	False	NA	-18	True	NA	NA	NA	40580893	40606588	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_40581103_40588985_40589117_40591233_40591366_40597526_40597665_40598680_40598735_40599591_40599742_40600761_40600882_40605560
H1_mix_00089165	chrX	+	1945	8	FSM	ENSG00000182220.15	ENST00000637327.1	1929	8	-16	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	314.472541872636	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTGACAAATAAAGTTAATG	NA	False	NA	0	True	NA	NA	NA	40580893	40606606	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_40581103_40591233_40591366_40597248_40597345_40597526_40597665_40598680_40598735_40599591_40599742_40600761_40600882_40605560
H1_mix_00089169	chrX	+	2099	9	FSM	ENSG00000182220.15	ENST00000636580.2	2242	9	-10	153	0	58	multi-exon	FALSE	canonical	3	831	junction_6	58.0425490480906	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTCATCAGGATTGGC	-7	True	NA	89	True	ACTAAA	-37	NA	40580959	40606695	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_40581103_40588985_40589117_40591233_40591366_40597248_40597345_40597526_40597665_40598680_40598735_40599591_40599742_40600761_40600882_40605560
H1_mix_00089171	chrX	+	900	2	FSM	ENSG00000234636.2	ENST00000456333.2	900	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGAATATGGGTCATTTA	NA	False	NA	8	True	GATAAA	-21	NA	40735399	40738701	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_40735791_40738192
H1_mix_00089172	chrX	+	474	1	FSM	ENSG00000237931.1	ENST00000422221.1	752	1	214	64	214	-64	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCAATACCTGTCCCAGT	NA	False	NA	NA	False	NA	NA	NA	41077212	41077686	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_41077200_41077700
H1_mix_00089173	chrX	+	12543	45	FSM	ENSG00000124486.14	ENST00000378308.7	12543	45	0	0	0	0	multi-exon	FALSE	canonical	3	1168	junction_13	298.252682647804	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGGTTTTCCCTTTATTT	0	True	NA	NA	False	AATAAA	-16	NA	41085444	41236579	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_41086110_41123470_41123725_41128999_41129146_41131456_41131537_41134724_41134838_41136803_41137023_41140655_41140772_41140965_41141218_41141292_41141432_41143290_41143444_41144521_41144627_41148368_41148576_41150920_41151058_41152947_41153082_41162789_41162878_41165871_41166215_41167481_41167578_41168006_41168219_41169994_41170236_41170469_41170620_41171837_41171959_41183997_41184129_41184396_41184676_41186516_41186643_41187991_41188118_41189308_41189476_41196250_41196360_41196591_41196739_41197363_41197511_41198527_41198751_41201059_41201281_41205302_41205494_41210508_41210683_41214567_41214710_41215898_41216653_41217219_41217344_41218371_41218598_41219101_41219232_41223216_41223403_41224741_41224963_41225048_41225138_41229252_41229410_41229566_41229780_41230500_41230597_41232386
H1_mix_00089174	chrX	+	12591	45	FSM	ENSG00000124486.14	ENST00000324545.9	12591	45	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_43	403.081515529002	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGGTTTTCCCTTTATTT	0	True	NA	NA	False	AATAAA	-16	NA	41085444	41236579	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_41086110_41123470_41123725_41128999_41129146_41131456_41131537_41134724_41134838_41136803_41137023_41140655_41140772_41140965_41141218_41141292_41141432_41143290_41143444_41144521_41144627_41148368_41148576_41150920_41151058_41152947_41153082_41162789_41162878_41165871_41166215_41167481_41167578_41168006_41168219_41169994_41170236_41170469_41170620_41171837_41171959_41183997_41184129_41184396_41184676_41186516_41186643_41187991_41188118_41189308_41189476_41196250_41196360_41196591_41196739_41197363_41197511_41198527_41198751_41201059_41201281_41205302_41205494_41210508_41210683_41214567_41214710_41215898_41216653_41217219_41217344_41218371_41218598_41219101_41219232_41223216_41223403_41224741_41224963_41225048_41225138_41229252_41229410_41229566_41229828_41230500_41230597_41232386
H1_mix_00089177	chrX	+	4786	16	FSM	ENSG00000215301.11	ENST00000457138.7	4786	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	179.393595822767	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTGGTTTATTTTCAGA	-10	True	NA	-27	True	AATAAA	-34	NA	41333912	41350224	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_41334298_41337407_41337466_41341483_41341617_41342494_41342654_41342736_41342837_41343215_41343352_41343736_41343823_41344029_41344129_41344238_41344400_41345179_41345325_41345403_41345549_41346228_41346411_41346504_41346623_41346858_41347013_41347311_41347452_41347639
H1_mix_00089178	chrX	+	5071	14	FSM	ENSG00000215301.11	ENST00000646822.1	5071	14	0	0	0	0	multi-exon	FALSE	canonical	3	509	junction_12	70.6687413636125	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTCTGATGTTAGTAAA	0	True	NA	NA	False	NA	NA	NA	41334161	41349739	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_41334298_41337407_41337466_41339035_41339084_41341483_41341617_41342494_41342654_41342736_41344129_41344238_41344400_41345179_41345325_41345403_41345549_41346228_41346411_41346504_41346623_41346858_41347013_41347311_41347452_41347639
H1_mix_00089179	chrX	+	4635	17	FSM	ENSG00000215301.11	ENST00000644876.2	4635	17	0	0	0	0	multi-exon	FALSE	canonical	3	509	junction_15	64.913403854674	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAAAATGTTATTTTTTG	0	True	NA	23	True	AATAAA	-19	NA	41334161	41350274	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_41334298_41337407_41337466_41339035_41339084_41341483_41341617_41342494_41342654_41342736_41342837_41343215_41343352_41343736_41343823_41344029_41344129_41344238_41344400_41345179_41345325_41345403_41345549_41346228_41346411_41346504_41346623_41346858_41347013_41347311_41347452_41347639
H1_mix_00089180	chrX	+	4605	16	FSM	ENSG00000215301.11	ENST00000644307.1	4605	16	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_14	128.631705094644	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTGATTTTATTAAAAT	0	True	NA	-19	True	NA	NA	NA	41334161	41350168	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_41334298_41337407_41337466_41339035_41339084_41341483_41341617_41342494_41342654_41342736_41342837_41343215_41343352_41343736_41343823_41344029_41344129_41344238_41344400_41345179_41345549_41346228_41346411_41346504_41346623_41346858_41347013_41347314_41347452_41347639
H1_mix_00089181	chrX	+	4567	17	FSM	ENSG00000215301.11	ENST00000646319.1	4554	17	-13	0	0	0	multi-exon	FALSE	canonical	3	208	junction_15	124.970605918952	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGTTGTTGTCAATTG	0	True	NA	22	True	AATAAA	-19	NA	41334161	41350209	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_41334298_41337407_41337466_41339035_41339084_41341483_41341617_41342494_41342654_41342736_41342837_41343215_41343352_41343736_41343823_41344029_41344129_41344238_41344400_41345179_41345325_41345403_41345549_41346228_41346411_41346504_41346623_41346858_41347013_41347314_41347452_41347639
H1_mix_00089182	chrX	+	5493	16	FSM	ENSG00000215301.11	ENST00000646196.1	5493	16	0	0	0	0	multi-exon	FALSE	canonical	3	509	junction_14	65.7030356139569	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGCTCTTGCCTGAAAAA	0	True	NA	3	True	NA	NA	NA	41334161	41350254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_41334298_41337407_41337466_41339035_41339084_41341483_41342654_41342736_41342837_41343215_41343352_41343736_41343823_41344029_41344129_41344238_41344400_41345179_41345325_41345403_41345549_41346228_41346411_41346504_41346623_41346858_41347013_41347311_41347452_41347639
H1_mix_00089183	chrX	+	4698	16	FSM	ENSG00000215301.11	ENST00000645338.1	4698	16	0	0	0	0	multi-exon	FALSE	canonical	3	509	junction_14	66.8079835548617	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTTGCCTGAAAAATTGT	0	True	NA	7	True	AATAAA	-3	NA	41334161	41350258	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_41334298_41337407_41337466_41339035_41339084_41341483_41341617_41342494_41342654_41342736_41342837_41343215_41343352_41343736_41343823_41344029_41344129_41344238_41344400_41345179_41345549_41346228_41346411_41346504_41346623_41346858_41347013_41347311_41347452_41347639
H1_mix_00089184	chrX	+	5227	17	FSM	ENSG00000215301.11	ENST00000644074.1	4620	17	-618	11	146	0	multi-exon	FALSE	canonical	3	18	junction_2	198.092455923364	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGCTCTTGCCTGAAAAA	21	False	NA	3	True	NA	NA	NA	41333543	41350254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_41334298_41337407_41337466_41339038_41339084_41341483_41341617_41342494_41342654_41342736_41342837_41343215_41343352_41343736_41343823_41344029_41344129_41344238_41344400_41345179_41345325_41345403_41345549_41346228_41346411_41346504_41346623_41346858_41347013_41347314_41347452_41347639
H1_mix_00089185	chrX	+	4632	17	FSM	ENSG00000215301.11	ENST00000399959.7	4632	17	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	171.156909004574	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAAAATGTTATTTTTTG	0	True	NA	23	True	AATAAA	-19	NA	41334161	41350274	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_41334298_41337407_41337466_41339038_41339084_41341483_41341617_41342494_41342654_41342736_41342837_41343215_41343352_41343736_41343823_41344029_41344129_41344238_41344400_41345179_41345325_41345403_41345549_41346228_41346411_41346504_41346623_41346858_41347013_41347311_41347452_41347639
H1_mix_00089187	chrX	+	5863	14	FSM	ENSG00000215301.11	ENST00000642424.1	5789	14	-74	0	-8	0	multi-exon	FALSE	canonical	3	509	junction_12	70.2670308274213	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTGCACAGTCTCCTTT	2	False	NA	8	True	AATAAA	-5	NA	41339934	41350195	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_41341617_41342494_41342654_41342736_41342837_41343215_41343352_41343736_41343823_41344029_41344129_41344238_41344400_41345179_41345325_41345403_41345549_41346228_41346411_41346504_41346623_41346858_41347013_41347311_41347452_41347639
H1_mix_00089188	chrX	+	4693	14	FSM	ENSG00000215301.11	ENST00000646679.1	4693	14	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_12	137.026754179418	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCATATTCTGATTTTATT	1137	False	NA	-24	True	NA	NA	NA	41341069	41350163	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_41341617_41342494_41342654_41342736_41342837_41343215_41343352_41343736_41343823_41344029_41344129_41344238_41344400_41345179_41345325_41345403_41345549_41346228_41346411_41346504_41346623_41346858_41347013_41347314_41347452_41347639
H1_mix_00089191	chrX	+	630	2	Intergenic	novelGene_1661	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTCAGAGATGTAATGA	NA	False	NA	NA	False	ATTAAA	-26	NA	42615836	42620006	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_42616028_42619567
H1_mix_00089192	chrX	+	4038	15	FSM	ENSG00000189221.11	ENST00000338702.4	3931	15	-103	-4	-14	4	multi-exon	FALSE	canonical	3	33	junction_3	5.22161910928487	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCGACTCCTGTATTTAG	1191	False	NA	40	True	AATAAA	-23	NA	43656195	43746821	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_43656415_43683512_43683608_43693290_43693429_43711871_43711977_43712704_43712797_43728172_43728315_43731240_43731391_43731693_43731854_43732698_43732796_43736226_43736281_43740680_43740739_43741949_43742048_43743793_43743906_43744108_43744172_43744366
H1_mix_00089193	chrX	+	660	1	FSM	ENSG00000214016.3	ENST00000412542.1	878	1	283	-65	283	65	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAATAAATAAATAAA	NA	False	NA	NA	False	AATAAA	-11	NA	44741369	44742029	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_44741400_44742000
H1_mix_00089194	chrX	+	5850	29	FSM	ENSG00000147050.17	ENST00000377967.9	5761	29	-93	4	-93	0	multi-exon	FALSE	canonical	3	61	junction_1	80.1830176940891	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGTAGTATAATAGTAG	5685	False	NA	7	True	AATAAA	-12	NA	44873094	45112598	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_44873713_44873923_44873988_44961283_44961393_44974665_44974716_45010960_45011020_45020609_45020731_45034930_45034986_45037654_45037690_45051708_45051803_45053828_45053956_45059005_45059105_45059246_45059467_45060021_45060157_45061323_45061420_45062646_45062749_45063421_45063818_45069578_45070358_45076696_45076827_45078399_45078506_45079145_45079352_45082575_45082641_45082714_45082790_45083459_45083609_45085864_45085980_45089742_45089931_45090722_45090865_45107409_45107537_45110078_45110250_45111381
H1_mix_00089195	chrX	+	6408	28	FSM	ENSG00000147050.17	ENST00000674739.1	6395	28	-13	0	-13	0	multi-exon	FALSE	canonical	3	47	junction_12	88.2402413417138	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTATTGTTAAGTTGCA	-12	True	NA	20	True	AATATA	-36	NA	44873174	45112542	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_44873713_44873923_44873988_44961283_44961393_44974665_44974716_45010960_45011020_45020609_45020731_45034930_45034986_45037654_45037690_45051708_45051803_45053828_45053956_45059005_45059105_45059246_45059467_45060608_45060765_45061323_45061420_45062646_45063818_45069578_45070358_45076696_45076827_45078399_45078506_45079145_45079352_45082575_45082641_45082714_45082790_45083459_45083609_45085864_45085980_45089742_45089931_45090722_45090865_45107409_45107537_45110078_45110250_45111381
H1_mix_00089196	chrX	+	5612	28	FSM	ENSG00000147050.17	ENST00000675577.1	5599	28	-13	0	-13	0	multi-exon	FALSE	canonical	3	61	junction_1	74.4679528019472	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTATTGTTAAGTTGCA	-12	True	NA	20	True	AATATA	-36	NA	44873174	45112542	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_44873713_44873923_44873988_44961283_44961393_44974665_44974716_45010960_45011020_45020609_45020731_45034930_45034986_45037654_45037690_45051708_45051803_45053828_45053956_45059005_45059105_45059246_45059467_45060021_45060157_45061323_45061420_45063421_45063818_45069578_45070358_45076696_45076827_45078399_45078506_45079145_45079352_45082575_45082641_45082714_45082790_45083459_45083609_45085864_45085980_45089742_45089931_45090722_45090865_45107409_45107537_45110078_45110250_45111381
H1_mix_00089197	chrX	+	6098	30	FSM	ENSG00000147050.17	ENST00000611820.5	6094	30	-13	9	-13	-9	multi-exon	FALSE	canonical	3	58	junction_13	89.0297816542481	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGTTAGGCAGTTTTGA	-12	True	NA	6	True	AATAAA	-17	NA	44873174	45112770	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_44873713_44873923_44873988_44961283_44961393_44974665_44974716_45010960_45011020_45020609_45020731_45034930_45034986_45037654_45037690_45051708_45051803_45053828_45053956_45059005_45059105_45059246_45059467_45060021_45060157_45060608_45060765_45061323_45061420_45062646_45062749_45063421_45063818_45069578_45070358_45076696_45076827_45078399_45078506_45079145_45079352_45082575_45082641_45082714_45082790_45083459_45083609_45085864_45085980_45089742_45089931_45090722_45090865_45107409_45107537_45110078_45110250_45111381
H1_mix_00089198	chrX	+	5256	28	FSM	ENSG00000147050.17	ENST00000683021.1	5256	28	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_12	86.5081170815066	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTATTGTTAAGTTGCA	311	False	NA	20	True	AATATA	-36	NA	44873551	45112542	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_44873713_44873923_44873988_44961283_44961393_44974665_44974716_45010960_45011020_45020609_45020731_45034930_45034986_45037654_45037690_45051708_45051803_45053828_45053956_45059005_45059105_45059246_45059467_45060608_45060765_45061323_45061420_45063421_45063818_45069578_45070358_45076696_45076827_45078399_45078506_45079145_45079352_45082575_45082641_45082714_45082790_45083459_45083609_45085864_45085980_45089742_45089931_45090722_45090865_45107409_45107537_45110078_45110250_45111381
H1_mix_00089199	chrX	+	5160	28	NNC	ENSG00000147050.17	novel	7459	24	NA	NA	-66918	0	intron_retention	FALSE	canonical	3	97	junction_13	64.8030253828124	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTATTGTTAAGTTGCA	NA	False	NA	20	True	AATATA	-36	NA	44951147	45112542	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_44951196_44961283_44961393_44974665_44974716_45010960_45011020_45020609_45020731_45034930_45034986_45037654_45037690_45051708_45051803_45053828_45053956_45059005_45059105_45059246_45059467_45060021_45060157_45061323_45061420_45062646_45062749_45063421_45063818_45069578_45070358_45076696_45076827_45078399_45078506_45079145_45079352_45082575_45082641_45082714_45082790_45083459_45083609_45085864_45085980_45089742_45089931_45090722_45090865_45107409_45107537_45110078_45110250_45111381
H1_mix_00089200	chrX	+	5233	27	NNC	ENSG00000147050.17	novel	7459	24	NA	NA	-66923	0	intron_retention	FALSE	canonical	3	32	junction_1	69.8467998106354	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGTAGTATAATAGTAG	NA	False	NA	7	True	AATAAA	-12	NA	44951142	45112598	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_44951310_44961283_44961393_44974665_44974716_45010960_45011020_45020609_45020731_45034930_45034986_45037654_45037690_45051708_45051803_45053828_45053956_45059005_45059105_45059246_45059467_45060021_45060157_45061323_45061420_45063421_45063818_45069578_45070358_45076696_45076827_45078399_45078506_45079145_45079352_45082575_45082641_45082714_45082790_45083459_45083609_45085864_45085980_45089742_45089931_45090722_45090865_45107409_45107537_45110078_45110250_45111381
H1_mix_00089201	chrX	+	4969	28	NNC	ENSG00000147050.17	novel	7459	24	NA	NA	-66904	-74	intron_retention	FALSE	canonical	3	32	junction_1	76.7916497803929	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTCTATTGTTTGAGTT	12	False	NA	38	True	ATTAAA	-19	NA	44951161	45112251	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_44951310_44961283_44961393_44974665_44974716_45010960_45011020_45020609_45020731_45034930_45034986_45037654_45037690_45051708_45051803_45053828_45053956_45059005_45059105_45059246_45059467_45060021_45060157_45061323_45061420_45062646_45062749_45063421_45063818_45069578_45070358_45076696_45076827_45078399_45078506_45079145_45079352_45082575_45082641_45082714_45082790_45083459_45083609_45085864_45085980_45089742_45089931_45090722_45090865_45107409_45107537_45110078_45110250_45111381
H1_mix_00089202	chrX	+	4749	28	NNC	ENSG00000147050.17	novel	7459	24	NA	NA	-66904	-67	intron_retention	FALSE	canonical	3	58	junction_12	71.4666651311344	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGAATGGAATGCTGTT	12	False	NA	24	True	TATAAA	-24	NA	44951161	45112091	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_44951196_44961283_44961393_44974665_44974716_45010960_45011020_45020609_45020731_45034930_45034986_45037654_45037690_45051708_45051803_45053828_45053956_45059005_45059105_45059246_45059467_45060021_45060157_45060608_45060765_45061323_45061420_45063421_45063818_45069578_45070358_45076696_45076827_45078399_45078506_45079145_45079352_45082575_45082641_45082714_45082790_45083459_45083609_45085864_45085980_45089742_45089931_45090722_45090865_45107409_45107537_45110078_45110250_45111381
H1_mix_00089203	chrX	+	5267	28	NNC	ENSG00000147050.17	novel	7459	24	NA	NA	-66897	-7	intron_retention	FALSE	canonical	3	32	junction_1	88.4350916327832	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGACTGGTTTATTGTTA	19	False	NA	13	True	AATATA	-29	NA	44951168	45112535	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_44951310_44961283_44961393_44974665_44974716_45010960_45011020_45020609_45020731_45034930_45034986_45037654_45037690_45051708_45051803_45053828_45053956_45059005_45059105_45059246_45059467_45060608_45060765_45061323_45061420_45062646_45062749_45063421_45063818_45069578_45070358_45076696_45076827_45078399_45078506_45079145_45079352_45082575_45082641_45082714_45082790_45083459_45083609_45085864_45085980_45089742_45089931_45090722_45090865_45107409_45107537_45110078_45110250_45111381
H1_mix_00089205	chrX	+	4428	3	FSM	ENSG00000147050.17	ENST00000479423.2	4428	3	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_1	13	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATATTTTATATATAC	NA	False	NA	112	True	NA	NA	NA	45104223	45112325	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_45107537_45110078_45110250_45111381
H1_mix_00089206	chrX	+	2263	2	Intergenic	novelGene_1663	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_1	0	237	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTACCGGGGCCCAAATGA	NA	False	NA	NA	False	AATAAA	-16	NA	45300910	45318624	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_45300977_45316427
H1_mix_00089207	chrX	+	2831	2	Intergenic	novelGene_1662	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	23	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAATGAATGAAATTTTCAA	NA	False	NA	NA	False	AATAAA	-29	NA	45300876	45318637	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_45301498_45316427
H1_mix_00089208	chrX	+	919	4	NNC	ENSG00000229491.5	novel	717	4	NA	NA	-19536	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	2.05480466765633	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAACTTTATTGTTTTCAT	NA	False	NA	NA	False	AATAAA	-16	NA	45300921	45333917	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_45300977_45325107_45325219_45325492_45325602_45333273
H1_mix_00089209	chrX	+	2611	6	FSM	ENSG00000147121.16	ENST00000298190.10	1354	6	-23	-1234	-23	264	multi-exon	FALSE	canonical	3	27	junction_5	17.7426040929735	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTAGGATTACAGGTGTGA	0	True	NA	NA	False	NA	NA	NA	46447268	46474903	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_46447347_46448199_46448311_46450430_46450476_46462747_46462875_46463197_46463294_46472749
H1_mix_00089210	chrX	+	2439	6	FSM	ENSG00000147121.16	ENST00000344302.9	2334	6	-89	-16	-84	16	multi-exon	FALSE	canonical	3	22	junction_5	19.5140974682407	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGAGACAGGTTATCGC	NA	False	NA	31	True	AATAAA	-32	NA	46447207	46474655	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_46447347_46448199_46448311_46450430_46450476_46462747_46462875_46463197_46463309_46472749
H1_mix_00089211	chrX	+	2282	2	FSM	ENSG00000230844.3	ENST00000421685.2	2078	2	18	-222	0	-211	multi-exon	FALSE	canonical	3	84	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACCTTAGATCTGCAGAA	-2	True	NA	NA	False	AATACA	-18	NA	46545510	46548630	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_46545628_46546465
H1_mix_00089212	chrX	+	1021	3	Fusion	ENSG00000230844.3_ENSG00000147119.4	novel	672	3	NA	NA	0	74	multi-exon	FALSE	canonical	3	27	junction_1	5.5	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGCTTCAGTCTTACTAG	-2	True	NA	NA	False	NA	NA	NA	46545510	46598570	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chrX_+_46545628_46563258_46563352_46597759
H1_mix_00089213	chrX	+	2396	2	FSM	ENSG00000147119.4	ENST00000276055.4	2396	2	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTGGGTTTAAGAATTT	-16	True	NA	117	True	AAGAAA	-4	NA	46573764	46598496	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_46575424_46597759
H1_mix_00089214	chrX	+	3809	5	FSM	ENSG00000102218.6	ENST00000218340.4	3700	5	-109	0	-109	0	multi-exon	FALSE	canonical	3	120	junction_3	9.36416040016402	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGCAATGGTTTGTATA	NA	False	NA	101	True	AATAAA	-18	NA	46836933	46882358	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_46837203_46853475_46854142_46859987_46860103_46877504_46877591_46879685
H1_mix_00089215	chrX	+	4945	11	FSM	ENSG00000102221.14	ENST00000614628.5	4947	11	2	0	2	0	multi-exon	FALSE	canonical	3	58	junction_5	14.8016890928029	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTGTCAGTGTGTTTTT	-22	True	NA	15	True	ATTAAA	-16	NA	46912422	47061242	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_46912720_46984883_46984941_46985712_46985793_46998119_46998278_47024723_47024915_47027891_47028104_47033620_47033789_47038948_47039066_47054157_47054629_47056081_47056200_47058166
H1_mix_00089216	chrX	+	3571	24	FSM	ENSG00000182872.16	ENST00000329236.8	3201	24	-370	0	-144	0	multi-exon	TRUE	canonical	3	39	junction_1	77.5324555493767	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTGGCCTCTCCTCTTTC	2795	False	NA	27	True	AATAAA	-16	NA	47145076	47186812	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_47145517_47147356_47147499_47169314_47169499_47171027_47171259_47173127_47173198_47175018_47175093_47176499_47176587_47179102_47179164_47179318_47179496_47179879_47180041_47180211_47180310_47180418_47180507_47181214_47181402_47181506_47181647_47181748_47181867_47181950_47182043_47182161_47182327_47185054_47185205_47185301_47185368_47185441_47185631_47185715_47185791_47186064_47186172_47186257_47186388_47186473
H1_mix_00089217	chrX	+	3397	24	FSM	ENSG00000182872.16	ENST00000377604.8	3397	24	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_10	56.9662786199956	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGCCTCTCCTCTTTCT	6	True	NA	28	True	AATAAA	-17	NA	47145220	47186813	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_47145486_47147356_47147499_47169314_47169499_47171027_47171259_47173127_47173198_47175018_47175093_47176499_47176587_47179102_47179164_47179318_47179496_47179879_47180041_47180211_47180310_47180418_47180507_47181214_47181402_47181506_47181647_47181748_47181867_47181950_47182043_47182161_47182327_47185054_47185205_47185301_47185368_47185441_47185631_47185715_47185791_47186064_47186172_47186257_47186388_47186473
H1_mix_00089218	chrX	+	3134	23	NIC	ENSG00000182872.16	novel	3201	24	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	97.902728332136	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTGGCCTCTCCTCTTTC	19	True	NA	27	True	AATAAA	-16	NA	47145282	47186812	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_47145517_47147356_47147499_47169314_47169499_47173127_47173198_47175018_47175093_47176499_47176587_47179102_47179164_47179318_47179496_47179879_47180041_47180211_47180310_47180418_47180507_47181214_47181402_47181506_47181647_47181748_47181867_47181950_47182043_47182161_47182327_47185054_47185205_47185301_47185368_47185441_47185631_47185715_47185791_47186064_47186172_47186257_47186388_47186473
H1_mix_00089219	chrX	+	3335	24	NIC	ENSG00000182872.16	novel	3397	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	193	junction_10	47.2633294028064	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTGGCCTCTCCTCTTTC	15	True	NA	27	True	AATAAA	-16	NA	47145278	47186812	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_47145486_47147356_47147499_47169314_47169499_47171027_47171259_47173127_47173198_47175018_47175093_47176499_47176587_47179102_47179164_47179318_47179496_47179879_47180038_47180211_47180310_47180418_47180507_47181214_47181402_47181506_47181647_47181748_47181867_47181950_47182043_47182161_47182327_47185054_47185205_47185301_47185368_47185441_47185631_47185715_47185791_47186064_47186172_47186257_47186388_47186473
H1_mix_00089220	chrX	+	3466	26	FSM	ENSG00000130985.17	ENST00000377351.8	3466	26	0	0	0	0	multi-exon	TRUE	canonical	3	251	junction_1	233.891003674789	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCGCCTGCCCTGCTGGTT	10	True	NA	-34	True	AATAAA	-17	NA	47190860	47215128	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_47190951_47198802_47198920_47199047_47199107_47199208_47199378_47199479_47199615_47200893_47201001_47201275_47201367_47201477_47201611_47202155_47202254_47202357_47202505_47202637_47202815_47202942_47203048_47203133_47203215_47203540_47203697_47205947_47206114_47206247_47206445_47209622_47209688_47209927_47210124_47210841_47210917_47211035_47211226_47212423_47212513_47212770_47212864_47212989_47213182_47214326_47214429_47214536_47214638_47214793
H1_mix_00089221	chrX	+	3572	26	FSM	ENSG00000130985.17	ENST00000335972.11	3572	26	0	0	0	0	multi-exon	FALSE	canonical	3	516	junction_1	201.537037787103	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCGCCTGCCCTGCTGGTT	3	True	NA	-34	True	AATAAA	-17	NA	47193828	47215128	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_47194025_47198802_47198920_47199047_47199107_47199208_47199378_47199479_47199615_47200893_47201001_47201275_47201367_47201477_47201611_47202155_47202254_47202357_47202505_47202637_47202815_47202942_47203048_47203133_47203215_47203540_47203697_47205947_47206114_47206247_47206445_47209622_47209688_47209927_47210124_47210841_47210917_47211035_47211226_47212423_47212513_47212770_47212864_47212989_47213182_47214326_47214429_47214536_47214638_47214793
H1_mix_00089223	chrX	+	945	1	FSM	ENSG00000224975.1	ENST00000456273.1	945	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTTGTTGGGTGAATGC	751	False	NA	NA	False	AATAAA	-1	NA	47204920	47205865	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_47204900_47205900
H1_mix_00089224	chrX	+	2497	10	FSM	ENSG00000130985.17	ENST00000377269.3	2497	10	0	0	0	0	multi-exon	FALSE	canonical	3	1108	junction_3	111.127665433462	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATCGCCTGCCCTGCTGG	2173	False	NA	-36	True	AATAAA	-15	NA	47208561	47215126	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_47209688_47209927_47210124_47210841_47210917_47211035_47211226_47212423_47212513_47212770_47212864_47212989_47213182_47214326_47214429_47214536_47214638_47214793
H1_mix_00089225	chrX	+	3158	16	FSM	ENSG00000102225.17	ENST00000457458.6	3158	16	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	206.42282388879	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCTTGCAAATCCCTGT	29	False	NA	28	True	ATTAAA	-17	NA	47218232	47229997	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_47218665_47223551_47223760_47224384_47224519_47224617_47224744_47224833_47224891_47224987_47225103_47225771_47225867_47225964_47226028_47226278_47226403_47226582_47226704_47226811_47226910_47226993_47227100_47227180_47227224_47227378_47227470_47228566_47228645_47228730
H1_mix_00089226	chrX	+	3151	16	FSM	ENSG00000102225.17	ENST00000357227.9	3151	16	0	0	0	0	multi-exon	FALSE	canonical	3	676	junction_1	75.2774423936768	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCTTGCAAATCCCTGT	-51	True	NA	28	True	ATTAAA	-17	NA	47218680	47229997	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_47219106_47223551_47223760_47224384_47224519_47224617_47224744_47224833_47224891_47224987_47225103_47225771_47225867_47225964_47226028_47226278_47226403_47226582_47226704_47226811_47226910_47226993_47227100_47227180_47227224_47227378_47227470_47228566_47228645_47228730
H1_mix_00089227	chrX	+	1679	8	FSM	ENSG00000102225.17	ENST00000522234.5	1679	8	0	0	0	0	multi-exon	FALSE	canonical	3	676	junction_1	98.8168786706202	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGCCTGGCCCGAGCCAA	44	True	NA	NA	False	NA	NA	NA	47218775	47226578	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_47219106_47223551_47223760_47224384_47224519_47224617_47224744_47224833_47224891_47224987_47225103_47225771_47225867_47225964
H1_mix_00089229	chrX	+	498	4	FSM	ENSG00000102225.17	ENST00000520141.5	498	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	440.039392176049	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCTGTCTGTCTCTGT	332	False	NA	29	True	NA	NA	NA	47227180	47228991	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_47227224_47227378_47227470_47228566_47228645_47228705
H1_mix_00089230	chrX	+	987	4	FSM	ENSG00000102226.10	ENST00000478596.5	970	4	-17	0	-17	0	multi-exon	FALSE	canonical	3	680	junction_1	14.9740516301441	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAACTCAGAAGGCTCTT	4141	False	NA	NA	False	NA	NA	NA	47232966	47240371	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_47233220_47239069_47239180_47239350_47239908_47240304
H1_mix_00089231	chrX	+	3237	21	FSM	ENSG00000102226.10	ENST00000377107.7	3196	21	-42	1	-17	0	multi-exon	TRUE	canonical	3	605	junction_7	60.3817853329959	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCAGCAGTGTGGTTTTTT	4141	False	NA	34	True	TATAAA	-18	NA	47232966	47248327	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_47233220_47239069_47239180_47239350_47239482_47239789_47239908_47240304_47240451_47240586_47240649_47240773_47240877_47241276_47241451_47241540_47241700_47242081_47242307_47242438_47242523_47242625_47242721_47243395_47243603_47244497_47244551_47244681_47244925_47245015_47245087_47245369_47245483_47247071_47247222_47247303_47247420_47247610_47247700_47247792
H1_mix_00089236	chrX	+	1253	1	FSM	ENSG00000196741.5	ENST00000357412.2	1253	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCCGGGCATGGTGTTG	729	False	NA	NA	False	ACTAAA	-13	NA	47483570	47484823	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_47483600_47484800
H1_mix_00089237	chrX	+	2378	16	FSM	ENSG00000078061.14	ENST00000377045.9	2378	16	0	0	0	0	multi-exon	FALSE	non_canonical	3	252	junction_4	28.3498775227611	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTTGTTTATTTTGTT	8	True	NA	25	True	NA	NA	NA	47561204	47571908	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_47561252_47562908_47563064_47563225_47563330_47564796_47564900_47564984_47565140_47565251_47565351_47566638_47566781_47566883_47566912_47566985_47567132_47567229_47567433_47568717_47568895_47568986_47569034_47569538_47569658_47569892_47570025_47570877_47571013_47571322
H1_mix_00089238	chrX	+	769	6	FSM	ENSG00000102265.12	ENST00000218388.9	769	6	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_4	35.6033706269505	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACTGTTTCTGTGTAGTG	-1	True	NA	26	True	AATAAA	-17	NA	47582435	47586789	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_47582475_47583407_47583537_47584935_47585016_47585204_47585332_47585542_47585668_47586520
H1_mix_00089239	chrX	+	609	3	NIC	ENSG00000197779.15	novel	11230	5	NA	NA	17	-3	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	4	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGTGTTTTACTGAGTT	12	True	NA	5	True	AATAAA	-13	NA	47836918	47861042	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_47836988_47846104_47846322_47860719
H1_mix_00089240	chrX	+	11217	5	FSM	ENSG00000197779.15	ENST00000338637.13	11230	5	13	0	13	0	multi-exon	FALSE	canonical	2	10	junction_1	1.92028643696715	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTGTGGACATAGTTTT	8	True	NA	16	True	AATAAA	-25	NA	47836914	47925627	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_47836988_47846104_47846322_47887998_47888126_47895844_47895941_47914923
H1_mix_00089242	chrX	+	1131	2	FSM	ENSG00000287757.2	ENST00000668079.1	1268	2	25	112	25	-112	multi-exon	FALSE	canonical	1	1	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCCCTTTTGAAACTCCC	18	False	NA	NA	False	NA	NA	NA	48071250	48078609	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48071527_48077754
H1_mix_00089243	chrX	+	1986	14	FSM	ENSG00000068438.15	ENST00000019019.6	1986	14	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	114.446907667076	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAATTTTGTTTCAATTT	NA	False	NA	22	True	ATTAAA	-20	NA	48476160	48486299	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48476397_48476562_48476669_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482408_48482507_48482596_48482795_48482985_48483028_48485735
H1_mix_00089244	chrX	+	1899	13	FSM	ENSG00000068438.15	ENST00000348411.3	1899	13	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_9	59.8198104495678	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTTCCATTGTAATTGT	-10	True	NA	15	True	AATATA	-26	NA	48476198	48486350	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48476397_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482402_48482507_48482596_48482795_48482985_48483028_48485735
H1_mix_00089245	chrX	+	1840	13	NIC	ENSG00000068438.15	novel	1986	14	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	95	junction_9	72	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAATTTTGTTTCAATTT	-8	True	NA	22	True	ATTAAA	-20	NA	48476200	48486299	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_48476397_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482408_48482507_48482596_48482795_48482985_48483028_48485735
H1_mix_00089246	chrX	+	1397	11	ISM	ENSG00000068438.15	ENST00000348411.3	1899	13	5	3396	1	0	5prime_fragment	FALSE	canonical	3	160	junction_9	52.9668764417914	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGAGTCACTTTTCTTT	-5	True	NA	33	True	TATAAA	-45	NA	48476203	48482954	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_48476397_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482402_48482507_48482596
H1_mix_00089248	chrX	+	1866	14	NIC	ENSG00000102312.24	novel	2079	14	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	32	junction_2	52.7127978128124	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTTTTATATACAATTTG	-2	True	NA	9	True	NA	NA	NA	48508991	48520757	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_48509104_48509423_48509578_48509783_48509957_48511365_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
H1_mix_00089250	chrX	+	1889	14	NNC	ENSG00000102312.24	novel	1867	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	56.0748654260033	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCTTCTTCTTCACTGCT	-2	True	NA	18	True	AATAAA	-17	NA	48508991	48520808	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_48509104_48509423_48509550_48509783_48509957_48511365_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
H1_mix_00089251	chrX	+	1866	14	FSM	ENSG00000102312.24	ENST00000355961.8	1848	14	-18	0	2	0	multi-exon	FALSE	canonical	3	27	junction_7	60.8783829843804	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTTCACTGCTCAGAGG	-10	True	NA	24	True	AATAAA	-23	NA	48508983	48520814	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48509104_48509783_48509957_48511294_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48512834_48512853_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
H1_mix_00089253	chrX	+	808	6	ISM	ENSG00000102312.24	ENST00000361988.7	1672	13	-21	7975	0	0	5prime_fragment	FALSE	canonical	3	77	junction_1	47.0548615979263	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCACAGCCTTCGAGGC	25	True	NA	NA	False	NA	NA	NA	48509018	48512719	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_48509104_48509783_48509957_48511294_48511488_48511891_48511936_48512325_48512508_48512588
H1_mix_00089254	chrX	+	1914	14	NIC	ENSG00000102312.24	novel	2079	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_2	48.1288949856983	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATATACAATTTGTTAT	25	True	NA	13	True	NA	NA	NA	48509018	48520761	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_48509104_48509423_48509578_48509783_48509957_48511294_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
H1_mix_00089255	chrX	+	2079	14	FSM	ENSG00000102312.24	ENST00000683923.1	2079	14	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	54.0841990947077	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAATATTCAATAGGCTTC	25	True	NA	6	True	AATAAA	-5	NA	48509018	48520796	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48509104_48509423_48509708_48509783_48509957_48511294_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
H1_mix_00089256	chrX	+	1747	13	NIC	ENSG00000102312.24	novel	1975	13	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	77	junction_1	43.0529389885935	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATAGGCTTCTTCTTCAC	10	True	NA	14	True	AATAAA	-13	NA	48509003	48520804	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_48509104_48509783_48509957_48511365_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
H1_mix_00089257	chrX	+	802	5	FSM	ENSG00000147155.11	ENST00000498425.1	796	5	-6	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	373.276958169132	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGCAAGAAGAACTGAGG	-7	True	NA	NA	False	NA	NA	NA	48521798	48528439	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48521908_48523753_48524073_48526988_48527026_48527154_48527286_48528233
H1_mix_00089258	chrX	+	1412	5	FSM	ENSG00000147155.11	ENST00000276096.10	904	5	-508	0	-508	0	multi-exon	FALSE	canonical	3	51	junction_1	381.920394192298	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTAACACTGAGAGATCCT	729	False	NA	9	True	AATAAA	-10	NA	48521290	48528710	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48521908_48523922_48524073_48526988_48527026_48527154_48527286_48528233
H1_mix_00089259	chrX	+	1134	5	FSM	ENSG00000147155.11	ENST00000495186.6	1125	5	-9	0	0	0	multi-exon	FALSE	canonical	3	439	junction_1	214.480039863853	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGAGAGATCCTTAATTA	-7	True	NA	15	True	AATAAA	-16	NA	48521798	48528716	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48521908_48523698_48524073_48526988_48527026_48527154_48527286_48528233
H1_mix_00089260	chrX	+	3799	6	FSM	ENSG00000068354.16	ENST00000376771.9	3785	6	-14	0	-14	0	multi-exon	FALSE	canonical	3	26	junction_3	8	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGATGCATTCTGTGATTT	-4	True	NA	11	True	AGTAAA	-15	NA	48539699	48562609	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48539921_48541332_48541443_48544868_48545024_48558896_48559025_48559157_48559347_48559613
H1_mix_00089263	chrX	+	4298	7	FSM	ENSG00000102317.18	ENST00000376759.8	4298	7	0	0	0	0	multi-exon	TRUE	canonical	3	888	junction_1	77.903073680625	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTATATTCGTTTTTTTAA	-1	True	NA	17	True	AATAAA	-22	NA	48574483	48581162	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48574574_48575167_48575284_48575560_48575668_48576313_48576420_48576507_48576605_48577025_48577110_48577464
H1_mix_00089265	chrX	+	1884	3	FSM	ENSG00000102317.18	ENST00000354480.2	1884	3	0	0	0	0	multi-exon	FALSE	canonical	3	1086	junction_2	9.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTTATTCTTACTCAGC	294	False	NA	21	True	ATTAAA	-22	NA	48575898	48578291	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48576420_48576507_48576605_48577025
H1_mix_00089268	chrX	+	1672	10	NIC	ENSG00000101940.18	novel	5457	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	48.9499618532241	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCGGCTCCCAGCTCTGC	-8	True	NA	11	True	AATAAA	-20	NA	48597491	48605118	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_48597615_48597957_48598038_48598750_48598958_48599352_48599463_48599586_48599718_48600318_48600627_48601783_48601965_48602064_48602207_48604271_48604391_48604847
H1_mix_00089269	chrX	+	2124	9	FSM	ENSG00000101940.18	ENST00000218056.9	2124	9	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	20.5669638012031	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGACTCATTTGTGC	-8	True	NA	26	True	NA	NA	NA	48597491	48605193	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48598038_48598716_48598958_48599352_48599463_48599586_48599718_48600318_48600627_48601783_48601965_48602064_48602207_48604271_48604391_48604847
H1_mix_00089270	chrX	+	5446	10	FSM	ENSG00000101940.18	ENST00000376729.10	5457	10	0	11	0	-11	multi-exon	FALSE	canonical	3	85	junction_1	29.5614029303394	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGTCACATTTGGGCCT	-8	True	NA	NA	False	AATAAA	-27	NA	48597491	48608858	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48597615_48597957_48598038_48598716_48598958_48599352_48599463_48599586_48599718_48600318_48600627_48601783_48601965_48602064_48602207_48604271_48604391_48604847
H1_mix_00089271	chrX	+	2486	8	FSM	ENSG00000101940.18	ENST00000479279.5	2486	8	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_2	12.9362644830535	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGACTCATTTGTGC	24	True	NA	26	True	NA	NA	NA	48597808	48605193	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48598958_48599352_48599463_48599586_48599718_48600318_48600627_48601783_48601965_48602064_48602207_48604271_48604391_48604847
H1_mix_00089277	chrX	+	4139	29	FSM	ENSG00000094631.21	ENST00000334136.11	4118	29	-21	0	-9	0	multi-exon	FALSE	canonical	3	73	junction_1	31.6829599150646	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGAGAAAGCTTTTTGAC	-20	True	NA	14	True	AATAAA	-19	NA	48802045	48824976	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48802143_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630_48805672_48806367_48806465_48806608_48806707_48808032_48808138_48808257_48808327_48814439_48814567_48814674_48814741_48814833_48814894_48814961_48815052_48815383_48815491_48815574_48815643_48815883_48816053_48816140_48816270_48816464_48816634_48817325_48817460_48818040_48818110_48818219_48818413_48820105_48820256_48822619_48822795_48822911_48823589_48823671_48823786_48823921_48824069_48824165_48824295_48824543
H1_mix_00089278	chrX	+	4099	29	FSM	ENSG00000094631.21	ENST00000643374.1	4099	29	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	36.1736881487873	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGTACAAGCTGTTAAAAAA	-29	True	NA	-6	True	NA	NA	NA	48802158	48824956	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48802236_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630_48805672_48806367_48806465_48806608_48806707_48808032_48808138_48808257_48808327_48814439_48814567_48814674_48814741_48814833_48814894_48814961_48815052_48815383_48815491_48815574_48815643_48815883_48816053_48816140_48816270_48816464_48816634_48817325_48817460_48818040_48818110_48818219_48818413_48820105_48820256_48822619_48822795_48822911_48823589_48823671_48823786_48823921_48824069_48824165_48824295_48824543
H1_mix_00089290	chrX	+	666	6	FSM	ENSG00000102103.18	ENST00000247140.8	664	6	-2	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	143.533132063646	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGAGTGCTTCCTTTG	8	True	NA	24	True	AATAAA	-25	NA	48897937	48903142	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48898015_48898491_48898577_48901189_48901302_48901929_48902043_48902731_48902796_48902927
H1_mix_00089291	chrX	+	952	7	FSM	ENSG00000102103.18	ENST00000376563.6	938	7	-14	0	0	0	multi-exon	FALSE	canonical	3	247	junction_1	55.4366505321364	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGAGTGCTTCCTTTGA	8	True	NA	25	True	AATAAA	-26	NA	48897937	48903143	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48898015_48898491_48898577_48901189_48901302_48901929_48902043_48902232_48902518_48902731_48902796_48902927
H1_mix_00089293	chrX	+	784	7	FSM	ENSG00000102103.18	ENST00000470062.5	784	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	140.207782316896	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCCCTGGGTTAAAATAAA	66	False	NA	-20	True	NA	NA	NA	48897995	48903098	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48898083_48898491_48898577_48901189_48901302_48901929_48902043_48902232_48902385_48902731_48902796_48902927
H1_mix_00089296	chrX	+	4025	10	FSM	ENSG00000147144.13	ENST00000606812.5	3857	10	-168	0	-151	0	multi-exon	FALSE	canonical	2	3	junction_2	12.8562805903295	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTTGCTGCTCTGTCTG	5242	False	NA	16	True	AATAAA	-17	NA	49058814	49069857	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_49059060_49061958_49062059_49062234_49062326_49062467_49062602_49063860_49064002_49064369_49064665_49065035_49065099_49065453_49065629_49065746_49065846_49067175
H1_mix_00089297	chrX	+	3904	10	NIC	ENSG00000147144.13	novel	3467	11	NA	NA	7	0	intron_retention	FALSE	canonical	0	0	junction_2	12.7540843131393	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATGTGTTGCTGCTCTGT	27	False	NA	13	True	AATAAA	-14	NA	49059027	49069854	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_49059096_49061958_49062118_49062234_49062326_49062467_49062602_49063860_49064002_49064369_49064665_49065035_49065099_49065453_49065629_49065746_49065846_49067175
H1_mix_00089300	chrX	+	3486	4	FSM	ENSG00000049769.14	ENST00000055335.11	3477	4	-9	0	-9	0	multi-exon	FALSE	canonical	3	37	junction_3	7.1336448530109	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAACACCACATATTTATT	-20	True	NA	NA	False	AATAAA	-17	NA	49269783	49288090	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_49270874_49281405_49281462_49281980_49282064_49285833
H1_mix_00089301	chrX	+	1449	5	NIC	ENSG00000049769.14	novel	2903	6	NA	NA	-8	3	intron_retention	FALSE	canonical	3	28	junction_4	9.86154146165801	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTCTTGCGCATCTTTTG	-18	True	NA	16	True	AATAAA	-21	NA	49269834	49301464	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_49270874_49281405_49281462_49281983_49282064_49299275_49299436_49301350
H1_mix_00089302	chrX	+	1456	5	NIC	ENSG00000049769.14	novel	2903	6	NA	NA	-19	-4	intron_retention	FALSE	canonical	3	28	junction_4	9.60143218483576	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAAAGTAGTCTTGCGCA	20	True	NA	9	True	AATAAA	-14	NA	49269823	49301457	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_49270874_49281405_49281462_49281980_49282064_49299275_49299436_49301350
H1_mix_00089303	chrX	+	2880	4	NIC	ENSG00000049769.14	novel	1885	5	NA	NA	14	0	intron_retention	FALSE	canonical	3	33	junction_2	9.10433352249844	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTGTCTTGCGGTGTA	3	True	NA	15	True	AATAGA	-11	NA	49269806	49287510	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_49270874_49281405_49281462_49281983_49282064_49285833
H1_mix_00089306	chrX	+	10126	15	FSM	ENSG00000171365.17	ENST00000376088.7	10108	15	-19	1	0	-1	multi-exon	FALSE	canonical	3	5	junction_2	6.05754715631834	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTCTGGTGTGTTTCTAA	14	True	NA	20	True	AATAAA	-20	NA	49922595	50099234	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_49922793_49923406_49923742_49925170_49925315_50042315_50042463_50069878_50070031_50072488_50072589_50075794_50075983_50080593_50080717_50081640_50081848_50085979_50086061_50086327_50086871_50088697_50088885_50090115_50090515_50090669_50090887_50092128
H1_mix_00089307	chrX	+	9450	12	FSM	ENSG00000171365.17	ENST00000376108.7	2660	12	34	-6824	34	0	multi-exon	FALSE	canonical	3	8	junction_1	5.54023599461549	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGTGTCTGGTGTGTTT	15	True	NA	16	True	AATAAA	-16	NA	50067609	50099230	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_50067761_50069878_50070031_50072488_50072589_50075794_50075983_50080593_50080717_50081640_50081848_50085979_50086061_50086327_50086871_50088697_50088885_50090115_50090515_50090669_50090887_50092128
H1_mix_00089308	chrX	+	1944	2	FSM	ENSG00000122824.11	ENST00000356450.3	1925	2	-19	0	-19	0	multi-exon	FALSE	canonical	3	194	junction_1	0	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGGAGTTATTCTTATT	7	True	NA	NA	False	AATAAA	-15	NA	51332802	51337525	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_51333460_51336238
H1_mix_00089309	chrX	+	1620	1	FSM	ENSG00000223591.5	ENST00000602548.2	1620	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGTGTGTTGGTGTGTCT	NA	False	NA	NA	False	AGTAAA	-15	NA	51710511	51712131	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_51710500_51712100
H1_mix_00089312	chrX	+	2723	13	FSM	ENSG00000179222.18	ENST00000326587.12	2723	13	0	0	0	0	multi-exon	FALSE	canonical	3	1274	junction_1	187.839026828825	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGATGTGCTCTCTGCTTC	-17	True	NA	21	True	AATAAA	-21	NA	51893622	51902354	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_51893756_51894268_51894350_51895052_51895761_51896408_51897078_51897207_51897272_51897546_51897627_51897794_51897887_51898113_51898194_51898284_51898328_51898580_51898644_51900181_51900297_51901552_51901939_51902145
H1_mix_00089313	chrX	+	2891	14	FSM	ENSG00000179222.18	ENST00000375695.2	2875	14	-16	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	579.60744724288	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGATGTGCTCTCTGCTTC	-17	True	NA	21	True	AATAAA	-21	NA	51893622	51902354	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_51893756_51894268_51894350_51894626_51894795_51895052_51895761_51896408_51897078_51897207_51897272_51897546_51897627_51897794_51897887_51898113_51898194_51898284_51898328_51898580_51898644_51900181_51900297_51901552_51901939_51902145
H1_mix_00089314	chrX	+	950	3	FSM	ENSG00000179222.18	ENST00000473931.1	950	3	0	0	0	0	multi-exon	FALSE	canonical	3	1620	junction_1	67.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGATGTGCTCTCTGCTTC	1744	False	NA	21	True	AATAAA	-21	NA	51898610	51902354	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_51898644_51900181_51900297_51901552
H1_mix_00089319	chrX	+	3020	12	FSM	ENSG00000154545.17	ENST00000477634.5	2996	12	-24	0	0	0	multi-exon	TRUE	canonical	3	41	junction_1	508.698403885546	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	2	True	NA	NA	False	ATTAAA	-14	NA	52184887	52192268	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_52184966_52185831_52186133_52186396_52187846_52187948_52188013_52188205_52188286_52188673_52188766_52189386_52189467_52189551_52189595_52189985_52190049_52190993_52191109_52191430_52191874_52192056
H1_mix_00089320	chrX	+	2507	13	FSM	ENSG00000154545.17	ENST00000498483.5	2483	13	-24	0	0	0	multi-exon	FALSE	canonical	3	315	junction_1	335.41378880753	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	2	True	NA	NA	False	ATTAAA	-14	NA	52184887	52192268	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_52184966_52185921_52186133_52186396_52187231_52187641_52187846_52187948_52188013_52188205_52188286_52188673_52188766_52189386_52189467_52189551_52189595_52189985_52190049_52190993_52191109_52191430_52191862_52192056
H1_mix_00089321	chrX	+	2519	13	FSM	ENSG00000154545.17	ENST00000375626.7	2495	13	-24	0	0	0	multi-exon	FALSE	canonical	3	191	junction_12	441.349469430594	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	2	True	NA	NA	False	ATTAAA	-14	NA	52184887	52192268	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_52184966_52185921_52186133_52186396_52187231_52187641_52187846_52187948_52188013_52188205_52188286_52188673_52188766_52189386_52189467_52189551_52189595_52189985_52190049_52190993_52191109_52191430_52191874_52192056
H1_mix_00089322	chrX	+	786	4	FSM	ENSG00000179304.18	ENST00000612188.4	776	4	-10	0	-10	0	multi-exon	FALSE	canonical	3	38	junction_1	56.6627449623354	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCCAGAGCCACAGGCCG	0	True	NA	NA	False	NA	NA	NA	52897295	52907613	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_52897410_52899467_52899542_52900567_52900661_52907108
H1_mix_00089326	chrX	+	2815	7	FSM	ENSG00000184205.14	ENST00000375442.8	2815	7	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	24.438130497692	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCCGCTTCGAGTCTTT	0	True	NA	16	True	AATAAA	-17	NA	53082366	53088540	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_53083306_53084544_53084623_53084754_53084867_53084953_53085100_53085226_53085322_53085630_53086311_53087775
H1_mix_00089330	chrX	+	4100	5	FSM	ENSG00000158526.8	ENST00000375151.5	4076	5	-24	0	-24	0	multi-exon	FALSE	canonical	3	1169	junction_1	56.3293884220306	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCAAAATGTGTGTTTGT	NA	False	NA	NA	False	AATAAA	-25	NA	54440379	54448032	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_54440503_54440689_54440781_54443399_54443492_54444007_54444185_54444415
H1_mix_00089331	chrX	+	2380	16	FSM	ENSG00000130119.17	ENST00000336470.8	2357	16	-23	0	5	0	multi-exon	FALSE	canonical	3	23	junction_8	8.25590697622012	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	0	True	NA	NA	False	NA	NA	NA	54530187	54561071	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_54530303_54532519_54532586_54539039_54539102_54540134_54540243_54541272_54541390_54542954_54543039_54543206_54543343_54544222_54544327_54548228_54548374_54550962_54551051_54551567_54551743_54551831_54551975_54552291_54552429_54554564_54554693_54558435_54558656_54560519
H1_mix_00089332	chrX	+	2661	17	FSM	ENSG00000130119.17	ENST00000674498.1	2638	17	21	-44	0	44	multi-exon	FALSE	canonical	1	3	junction_16	12.7058057595731	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGGGTATTTTGTTAC	-46	True	NA	11	True	AATAAA	-22	NA	54530203	54621565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_54530303_54532519_54532586_54539039_54539102_54540134_54540243_54541272_54541390_54542954_54543039_54543206_54543343_54544222_54544327_54548228_54548374_54550962_54551051_54551567_54551743_54551831_54551975_54552291_54552429_54554564_54554693_54558435_54558656_54560519_54560648_54620844
H1_mix_00089333	chrX	+	8699	16	FSM	ENSG00000130119.17	ENST00000360845.3	8684	16	-15	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	9.89185972852875	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATATGTCTGCATTTTTT	-46	True	NA	NA	False	AATAAA	-26	NA	54530203	54567289	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_54530420_54532519_54532586_54539039_54539102_54540134_54540243_54541272_54541390_54542954_54543039_54543206_54543343_54544222_54544327_54548228_54548374_54550962_54551051_54551567_54551743_54551831_54551975_54552291_54552429_54554564_54554693_54558435_54558656_54560519
H1_mix_00089335	chrX	+	2051	13	FSM	ENSG00000102316.17	ENST00000375068.6	2051	13	0	0	0	0	multi-exon	TRUE	canonical	3	1016	junction_1	244.142532936989	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTATTGCTTTTTTTGGCG	5	True	NA	34	True	ATTAAA	-19	NA	54807744	54816015	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_54807803_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247_54815691_54815880
H1_mix_00089336	chrX	+	2087	14	NNC	ENSG00000102316.17	novel	2051	13	NA	NA	0	1093	intron_retention	FALSE	non_canonical	0	0	junction_13	521.060332228894	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGGGCAGTGACTGGATG	5	True	NA	NA	False	AAAAAG	-9	NA	54807744	54817108	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_54807803_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247_54815691_54815880_54816011_54817067
H1_mix_00089338	chrX	+	2304	12	FSM	ENSG00000102316.17	ENST00000218439.8	1958	12	1	-347	1	26	multi-exon	FALSE	canonical	3	751	junction_1	323.843804815462	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTTTGGTATCACATTT	-6	True	NA	60	True	ATTAAA	-45	NA	54808338	54816041	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_54808434_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247
H1_mix_00089339	chrX	+	2125	14	NNC	ENSG00000102316.17	novel	2048	13	NA	NA	1	1090	intron_retention	FALSE	non_canonical	0	0	junction_13	548.433508831716	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACCAGGGCAGTGACTGG	-6	True	NA	NA	False	AAAAAG	-6	NA	54808338	54817105	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_54808434_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247_54815691_54815880_54816015_54817067
H1_mix_00089340	chrX	+	2048	13	FSM	ENSG00000102316.17	ENST00000375058.5	2048	13	0	0	0	0	multi-exon	FALSE	canonical	3	751	junction_1	311.79373523747	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGAGTTTATTGCTTT	-8	True	NA	26	True	ATTAAA	-11	NA	54808370	54816007	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_54808434_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247_54815691_54815880
H1_mix_00089341	chrX	+	2091	14	NNC	ENSG00000102316.17	novel	2048	13	NA	NA	0	1090	intron_retention	FALSE	non_canonical	0	0	junction_13	548.433508831716	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACCAGGGCAGTGACTGG	-8	True	NA	NA	False	AAAAAG	-6	NA	54808370	54817105	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_54808434_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247_54815691_54815880_54816015_54817069
H1_mix_00089342	chrX	+	2092	14	NNC	ENSG00000102316.17	novel	2048	13	NA	NA	0	1093	intron_retention	FALSE	non_canonical	0	0	junction_13	548.433508831716	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGGGCAGTGACTGGATG	-8	True	NA	NA	False	AAAAAG	-9	NA	54808370	54817108	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_54808434_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247_54815691_54815880_54816011_54817067
H1_mix_00089343	chrX	+	2445	12	FSM	ENSG00000102316.17	ENST00000396224.1	2026	12	0	-419	0	98	multi-exon	FALSE	canonical	3	133	junction_1	494.626296868372	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATTGTTGGATTCCCAG	651	False	NA	132	True	NA	NA	NA	54809059	54816113	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_54809224_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247
H1_mix_00089347	chrX	+	737	2	FSM	ENSG00000067445.22	ENST00000453081.5	722	2	-15	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCAGTCATTACCCAGAT	233	False	NA	NA	False	TTTAAA	-2	NA	54920795	54922856	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_54920879_54922202
H1_mix_00089350	chrX	+	2341	13	FSM	ENSG00000067445.22	ENST00000319167.12	2326	13	-15	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	154.52471934577	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTTTTTTCTGTCTTT	233	False	NA	NA	False	ATTAAA	-14	NA	54920795	54931431	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_54920879_54922202_54922292_54922577_54923769_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602_54928711_54931203
H1_mix_00089352	chrX	+	4634	13	FSM	ENSG00000067445.22	ENST00000173898.12	4634	13	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	103.96620711665	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTTTTTTCTGTCTTT	0	True	NA	NA	False	ATTAAA	-14	NA	54920823	54931431	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_54920879_54922202_54922292_54922577_54923769_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602_54931032_54931203
H1_mix_00089353	chrX	+	2546	13	NIC	ENSG00000067445.22	novel	2597	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	174.966425350694	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTTTTTTCTGTCTTT	0	True	NA	NA	False	ATTAAA	-14	NA	54920823	54931431	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_54920879_54922217_54922292_54922577_54923769_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54927042_54927106_54927666_54927782_54928602_54928711_54930740_54931032_54931203
H1_mix_00089354	chrX	+	2591	14	NIC	ENSG00000067445.22	novel	2597	14	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	153.452881961365	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTTTTTTCTGTCTTT	13	False	NA	NA	False	ATTAAA	-14	NA	54920836	54931431	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_54920879_54922202_54922292_54922577_54923769_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602_54928711_54930740_54931032_54931203
H1_mix_00089355	chrX	+	4793	12	ISM	ENSG00000067445.22	ENST00000173898.12	4634	13	13	0	12	0	intron_retention	FALSE	canonical	3	112	junction_1	103.842538139593	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTTTTTTCTGTCTTT	13	False	NA	NA	False	ATTAAA	-14	NA	54920836	54931431	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_54920879_54922202_54922292_54922577_54923769_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602
H1_mix_00089356	chrX	+	2819	13	NIC	ENSG00000067445.22	novel	2597	14	NA	NA	0	0	intron_retention	TRUE	canonical	0	0	junction_12	165.209883347079	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGAGTTTTTTCTGTCT	27	False	NA	NA	False	ATTAAA	-12	NA	54920850	54931429	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_54920966_54922217_54922292_54922577_54923769_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602_54928711_54930740
H1_mix_00089357	chrX	+	3677	9	FSM	ENSG00000067445.22	ENST00000492706.5	3677	9	0	0	0	0	multi-exon	FALSE	canonical	3	427	junction_4	33.0792136393839	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGAGTTTTTTCTGTCT	1893	False	NA	NA	False	ATTAAA	-12	NA	54924487	54931429	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54927106_54927666_54927782_54928602_54931032_54931203
H1_mix_00089360	chrX	+	3028	5	FSM	ENSG00000169188.5	ENST00000471758.1	728	5	0	-2300	0	0	multi-exon	FALSE	canonical	3	19	junction_2	82.965354214877	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTTTGTGCTTTATTTT	28	True	NA	3	True	AATAAA	-14	NA	55000392	55009057	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_55000580_55001545_55001630_55002961_55003109_55003798_55003869_55006517
H1_mix_00089362	chrX	+	2051	10	FSM	ENSG00000083750.13	ENST00000374941.9	2051	10	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	12.1695836178605	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGTCTATTTTTCTT	-13	True	NA	NA	False	AATAAA	-17	NA	55717748	55758774	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_55718420_55719313_55719348_55722185_55722286_55729293_55729361_55731363_55731587_55751100_55751197_55753391_55753515_55755840_55755933_55757215_55757332_55758245
H1_mix_00089363	chrX	+	1573	11	FSM	ENSG00000083750.13	ENST00000262850.7	1573	11	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_4	26.528475267154	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGAATATTGTTTCACACA	82	False	NA	NA	False	NA	NA	NA	55717884	55758348	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_55718420_55719313_55719348_55722185_55722286_55727306_55727391_55729293_55729361_55731363_55731587_55751100_55751197_55753391_55753515_55755840_55755933_55757215_55757332_55758245
H1_mix_00089364	chrX	+	507	3	FSM	ENSG00000083750.13	ENST00000498762.1	507	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	14.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTTTGTCATTTACTTT	4388	False	NA	NA	False	AATAAA	-24	NA	55722190	55731708	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_55722286_55729293_55729361_55731363
H1_mix_00089365	chrX	+	956	2	FSM	ENSG00000227486.3	ENST00000452532.1	1007	2	51	0	21	0	multi-exon	FALSE	canonical	3	32	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATTTTTCCCCATTCAA	NA	False	NA	4	True	AATAAA	-19	NA	55908173	56015173	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_55908801_56014844
H1_mix_00089367	chrX	+	8964	5	FSM	ENSG00000102349.18	ENST00000462627.5	8964	5	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_1	14.3940091704848	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAACTGAAGTCCATACTT	-2	True	NA	17	True	AATAAA	-22	NA	56232473	56287884	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_56233342_56250230_56250305_56265179_56269490_56270181_56270322_56284312
H1_mix_00089369	chrX	+	896	4	FSM	ENSG00000204272.13	ENST00000637096.1	896	4	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_2	502.329462493381	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCGCTGTGTTAGATCTAT	-29	True	NA	17	True	AATAAA	-11	NA	56729240	56817569	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_56729590_56732062_56732200_56811019_56811180_56817319
H1_mix_00089370	chrX	+	2346	3	FSM	ENSG00000204272.13	ENST00000374922.9	2344	3	-2	0	0	0	multi-exon	FALSE	canonical	3	1028	junction_2	31	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAAAAGATAAACTGG	-29	True	NA	NA	False	AATAAA	-1	NA	56729240	56819179	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_56729590_56732062_56732200_56817319
H1_mix_00089376	chrX	+	2840	1	FSM	ENSG00000228158.2	ENST00000422965.1	589	1	-1421	-830	-1421	830	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATTTTTGTTTGCAGACA	NA	False	NA	NA	False	AATAAA	-31	NA	65406662	65409502	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_65406700_65409500
H1_mix_00089378	chrX	+	4094	19	NIC	ENSG00000089472.18	novel	4431	21	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	39	junction_15	49.3133092494897	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGACTGAATTTGGTGAT	13	True	NA	23	True	ATTAAA	-18	NA	66164246	66267385	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_66164471_66170557_66170738_66172354_66172600_66173588_66173802_66188358_66188542_66189683_66189939_66192129_66192299_66193501_66193639_66195097_66195230_66197682_66197895_66198877_66199029_66200539_66200753_66203363_66203578_66207194_66207335_66208114_66208247_66258839_66258980_66260099_66260263_66263643_66263689_66266439
H1_mix_00089379	chrX	+	4431	21	FSM	ENSG00000089472.18	ENST00000343002.7	4431	21	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_5	26.9228527463194	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGAATTTGGTGATTTTT	13	True	NA	27	True	ATTAAA	-22	NA	66164246	66267389	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_66164471_66170557_66170738_66172354_66172600_66173588_66173802_66188358_66188542_66189683_66189939_66192129_66192299_66193501_66193639_66195097_66195230_66197682_66197895_66198877_66199029_66200539_66200753_66203363_66203578_66207194_66207335_66208114_66208247_66255034_66255142_66256104_66256331_66258839_66258980_66260099_66260263_66263643_66263689_66266439
H1_mix_00089380	chrX	+	3700	18	FSM	ENSG00000089472.18	ENST00000419594.6	3694	18	-6	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	58.2266779128025	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGCAAACCCTATCCATTA	-6	True	NA	-16	True	NA	NA	NA	66164358	66267346	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_66164471_66170557_66170738_66172354_66172600_66173588_66173802_66188358_66188542_66189683_66189939_66192129_66192299_66193501_66193639_66195097_66195230_66203363_66203578_66207194_66207335_66208114_66208247_66255034_66255142_66256104_66256331_66258839_66258980_66260099_66260263_66263643_66263689_66266439
H1_mix_00089381	chrX	+	4091	20	FSM	ENSG00000089472.18	ENST00000425114.2	4067	20	-24	0	0	0	multi-exon	FALSE	canonical	1	4	junction_11	54.9295191819692	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAGAACACTGAAAGACTG	-6	True	NA	12	True	ATTAAA	-7	NA	66164358	66267374	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_66164471_66170557_66170738_66172354_66172600_66173588_66173802_66188358_66188542_66189683_66189939_66192129_66192299_66193501_66193639_66195097_66195230_66197682_66197895_66198877_66199029_66203363_66203578_66207194_66207335_66208114_66208247_66255034_66255142_66256104_66256331_66258839_66258980_66260099_66260263_66263643_66263689_66266439
H1_mix_00089385	chrX	+	6554	7	FSM	ENSG00000181704.12	ENST00000462683.6	6010	7	-544	0	-55	0	multi-exon	FALSE	canonical	3	272	junction_6	25.660713595343	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTGTGTGTGCCTATTC	NA	False	NA	18	True	ATTAAA	-26	NA	68498506	68537282	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_68499124_68511848_68511978_68513326_68513406_68518769_68518813_68521371_68521498_68522759_68522918_68531880
H1_mix_00089386	chrX	+	6134	6	FSM	ENSG00000181704.12	ENST00000374622.3	6134	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	117.114644686307	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACACTGGAAAAAGAAT	NA	False	NA	2	True	ATTAAA	-10	NA	68498781	68537266	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_68499124_68513326_68513406_68518769_68518813_68521371_68521498_68522759_68522918_68531880
H1_mix_00089387	chrX	+	4933	15	FSM	ENSG00000130052.14	ENST00000374599.8	4943	15	10	0	7	0	multi-exon	FALSE	canonical	2	4	junction_1	5.26055789700628	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTAACTGTGTGGCTGTCT	NA	False	NA	8	True	AATAAA	-18	NA	68647675	68725836	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_68647928_68665498_68665533_68712913_68712986_68715293_68715376_68716367_68716432_68717211_68718630_68719224_68719399_68720263_68720424_68720923_68721123_68721535_68721747_68722046_68722162_68722421_68722647_68723625_68723844_68723944_68724122_68724304
H1_mix_00089388	chrX	+	4827	14	FSM	ENSG00000130052.14	ENST00000374597.3	4820	14	-7	0	-7	0	multi-exon	FALSE	canonical	2	13	junction_1	3.02455434635962	1939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTTAACTGTGTGGCTG	2	True	NA	5	True	AATAAA	-15	NA	68693643	68725833	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_68693827_68712913_68712986_68715293_68715376_68716367_68716432_68717211_68718630_68719224_68719399_68720263_68720424_68720923_68721123_68721535_68721747_68722046_68722162_68722421_68722647_68723625_68723844_68723944_68724122_68724304
H1_mix_00089389	chrX	+	512	1	ISM	ENSG00000213740.2	ENST00000396021.2	1160	2	916	167	916	-167	mono-exon	FALSE	NA	NA	NA	NA	NA	2951	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGCTGGAGATCAATTTT	1003	False	NA	NA	False	NA	NA	NA	68784387	68784899	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_68784400_68784900
H1_mix_00089390	chrX	+	3327	5	FSM	ENSG00000090776.6	ENST00000204961.5	3303	5	-24	0	-24	0	multi-exon	FALSE	canonical	3	23	junction_3	9.36416040016402	4573	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGGGTGTAAAATGGTG	-8	True	NA	81	True	ACTAAA	-23	NA	68828996	68842160	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_68829905_68838616_68838895_68839663_68839757_68839959_68840089_68840241
H1_mix_00089391	chrX	+	4943	3	FSM	ENSG00000130054.5	ENST00000252338.5	4928	3	-15	0	-15	0	multi-exon	FALSE	canonical	3	54	junction_1	6	1469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCCCTTCATGGCTTTGT	NA	False	NA	47	True	AATAAA	-20	NA	69504310	69532508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_69506144_69528992_69529165_69529570
H1_mix_00089392	chrX	+	2641	2	NNC	ENSG00000130054.5	novel	4928	3	NA	NA	403	-17402	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	6504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTATTTATCTACTTTGCT	316	False	NA	29	True	AATAAA	-20	NA	69504728	69515106	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_69506144_69513880
H1_mix_00089395	chrX	+	5745	8	FSM	ENSG00000158813.18	ENST00000524573.5	1381	8	-532	-3832	-482	0	multi-exon	FALSE	canonical	2	3	junction_6	11.9146625497103	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCGGCGTGAGTACTTCC	NA	False	NA	28	True	AATAAA	-23	NA	69615584	70039469	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_69616705_69957026_69957133_70023217_70023242_70027856_70028037_70029503_70029539_70030468_70030521_70033406_70033523_70035357
H1_mix_00089396	chrX	+	5314	8	FSM	ENSG00000158813.18	ENST00000374553.6	5272	8	-42	0	-42	0	multi-exon	FALSE	canonical	3	18	junction_7	7.16567783084826	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCGGCGTGAGTACTTCC	NA	False	NA	28	True	AATAAA	-23	NA	69616024	70039469	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_69616705_69957026_69957133_70023217_70023242_70027856_70028037_70029503_70029539_70030468_70030521_70033397_70033523_70035357
H1_mix_00089397	chrX	+	5760	8	FSM	ENSG00000158813.18	ENST00000374552.9	5235	8	-528	3	-482	0	multi-exon	FALSE	canonical	3	17	junction_7	7.41482244134913	871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCGGCGTGAGTACTTCC	NA	False	NA	28	True	AATAAA	-23	NA	69615584	70039469	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_69616705_69957026_69957133_70023217_70023242_70027856_70028037_70029503_70029539_70030468_70030521_70033397_70033529_70035357
H1_mix_00089398	chrX	+	1787	7	FSM	ENSG00000089289.16	ENST00000356413.5	1682	7	-105	0	-105	0	multi-exon	FALSE	canonical	3	15	junction_1	110.561697205175	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTATCAGCTGCTTTT	NA	False	NA	30	True	AATAAA	-33	NA	70133341	70166324	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_70133541_70133722_70134136_70134522_70134817_70146632_70146829_70148760_70148841_70150209_70150323_70165832
H1_mix_00089399	chrX	+	1864	6	FSM	ENSG00000089289.16	ENST00000342206.10	1862	6	-2	0	0	0	multi-exon	FALSE	canonical	3	294	junction_4	10.2683981223947	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTATCAGCTGCTTTT	-16	True	NA	30	True	AATAAA	-33	NA	70133446	70166324	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_70134136_70134522_70134817_70146632_70146829_70148760_70148841_70150209_70150323_70165832
H1_mix_00089402	chrX	+	4388	31	FSM	ENSG00000090889.12	ENST00000374403.4	4388	31	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_12	26.2412948528756	2602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCCTGAGGAAGCTATTAA	5	True	NA	9	True	AATAAA	-21	NA	70290103	70420886	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_70290151_70290437_70290579_70290690_70290806_70296997_70297189_70299112_70299203_70301899_70302067_70302303_70302399_70329404_70329522_70330156_70330333_70333627_70333690_70341798_70341932_70343702_70343762_70343876_70343983_70352599_70352657_70353621_70353808_70374150_70374255_70375203_70375349_70376099_70376211_70386617_70386702_70387183_70387298_70395670_70395827_70395948_70396050_70402565_70402696_70403863_70404035_70404714_70404823_70405827_70405906_70406258_70406355_70406892_70407076_70417887_70418005_70419660_70419784_70420061
H1_mix_00089403	chrX	+	2205	15	FSM	ENSG00000130055.14	ENST00000536730.5	2171	15	-43	9	-43	0	multi-exon	FALSE	canonical	3	14	junction_1	38.2115486336211	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTCTCAGACTTGTGTG	NA	False	NA	32	True	AGTAAA	-17	NA	70422987	70433381	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_70423383_70425353_70425458_70425762_70425857_70426051_70426112_70426370_70426470_70426647_70426742_70426865_70427012_70427136_70427220_70427312_70427464_70429492_70429715_70429914_70430064_70432306_70432455_70432578_70432662_70432911_70432941_70433033
H1_mix_00089404	chrX	+	2067	14	FSM	ENSG00000130055.14	ENST00000538649.5	2067	14	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	36.4383243205549	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGTGTGCACGTGTTC	9	False	NA	41	True	AGTAAA	-26	NA	70423030	70433390	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_70423383_70425762_70425857_70426051_70426112_70426370_70426470_70426647_70426742_70426865_70427012_70427136_70427220_70427312_70427464_70429492_70429715_70429914_70430064_70432306_70432455_70432578_70432662_70432911_70432941_70433033
H1_mix_00089405	chrX	+	1993	16	FSM	ENSG00000130055.14	ENST00000374382.4	1993	16	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_3	23.5509848815052	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTCTCAGACTTGTGTG	-5	True	NA	32	True	AGTAAA	-17	NA	70423313	70433381	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_70423383_70424975_70425090_70425353_70425458_70425762_70425857_70426051_70426112_70426370_70426470_70426647_70426742_70426865_70427012_70427136_70427220_70427312_70427464_70429492_70429715_70429914_70430064_70432306_70432455_70432578_70432662_70432911_70432941_70433033
H1_mix_00089406	chrX	+	5094	14	FSM	ENSG00000082458.12	ENST00000374355.7	5074	14	-20	0	-20	0	multi-exon	FALSE	canonical	3	44	junction_1	59.294072066679	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGACCAGCTTTGTCTTA	7423	False	NA	9	True	AATAAA	-21	NA	70452284	70505487	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_70452756_70453636_70453794_70454213_70454317_70479149_70479265_70492106_70492284_70492520_70492597_70493375_70493476_70497179_70497222_70498519_70498571_70499175_70499278_70499876_70500050_70500470_70500581_70500897_70500990_70502162
H1_mix_00089407	chrX	+	738	4	FSM	ENSG00000082458.12	ENST00000494493.1	719	4	-19	0	-8	0	multi-exon	FALSE	canonical	3	15	junction_1	73.8030411899733	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACACGGAGAAAGTGAGCAG	2516	False	NA	NA	False	NA	NA	NA	70455087	70492237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_70455264_70455786_70456103_70479149_70479265_70492106
H1_mix_00089408	chrX	+	4565	12	FSM	ENSG00000082458.12	ENST00000542398.1	4529	12	-36	0	-36	0	multi-exon	FALSE	canonical	3	123	junction_1	27.9754910443687	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATGACCAGCTTTGTCT	2488	False	NA	7	True	AATAAA	-19	NA	70455059	70505485	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_70455264_70479149_70479265_70492106_70492284_70492520_70492597_70493375_70493476_70497179_70497222_70498519_70498571_70499175_70499278_70499876_70500050_70500470_70500581_70500897_70500990_70502162
H1_mix_00089409	chrX	+	333	1	FSM	ENSG00000230629.2	ENST00000429775.2	330	1	-3	0	-3	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTAATGGTGAAAACCCT	NA	False	NA	-54	True	NA	NA	NA	70962960	70963293	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_70963000_70963300
H1_mix_00089410	chrX	+	3537	3	FSM	ENSG00000184481.17	ENST00000374259.8	3644	3	107	0	107	0	multi-exon	FALSE	canonical	3	51	junction_1	10.5	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGGTTTCTGCTGCCTT	109	False	NA	30	True	AATAAA	-30	NA	71095957	71103532	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71096982_71100683_71101741_71102076
H1_mix_00089411	chrX	+	6938	45	FSM	ENSG00000184634.17	ENST00000374080.8	6925	45	-13	0	-13	0	multi-exon	FALSE	canonical	0	0	junction_39	30.1613087490338	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGTGTGCGAGTTCTGCA	-30	True	NA	24	True	AATACA	-18	NA	71118582	71142450	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71118854_71119372_71119478_71119685_71119878_71120013_71120171_71120970_71121153_71121326_71121438_71121561_71121817_71122199_71122347_71122507_71122608_71122737_71122875_71123094_71123227_71123593_71123721_71124158_71124389_71124763_71124845_71124975_71125147_71125350_71125496_71125662_71125714_71126035_71126155_71126340_71126485_71126968_71127133_71127335_71127468_71127892_71128121_71128295_71128441_71128597_71128719_71129113_71129216_71129315_71129430_71129679_71129856_71130034_71130215_71131549_71131622_71132072_71132207_71132376_71132539_71132844_71132957_71133122_71133213_71134356_71134467_71134712_71134849_71135091_71135254_71136280_71136656_71136878_71137030_71137186_71137384_71137557_71137636_71137725_71137944_71140634_71140858_71141229_71141371_71141882_71141965_71142174
H1_mix_00089412	chrX	+	6981	45	FSM	ENSG00000184634.17	ENST00000374102.6	6901	45	-77	-3	-4	3	multi-exon	FALSE	canonical	3	69	junction_9	25.1833770439717	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGCGAGTTCTGCATGT	8	True	NA	27	True	AATACA	-21	NA	71118551	71142453	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71118854_71119372_71119478_71119685_71119878_71120013_71120171_71120970_71121153_71121326_71121438_71121561_71121817_71122199_71122347_71122507_71122608_71122737_71122875_71123094_71123227_71123593_71123721_71124158_71124389_71124763_71124845_71124975_71125147_71125350_71125496_71125662_71125714_71126035_71126155_71126340_71126485_71126968_71127133_71127335_71127468_71127892_71128121_71128295_71128441_71128597_71128719_71129113_71129216_71129315_71129430_71129679_71129856_71130034_71130215_71131549_71131622_71132072_71132207_71132376_71132539_71132844_71132957_71133122_71133213_71134356_71134467_71134712_71134849_71135091_71135254_71136280_71136656_71136878_71137030_71137186_71137393_71137557_71137636_71137725_71137944_71140634_71140858_71141229_71141371_71141882_71141965_71142174
H1_mix_00089413	chrX	+	6236	43	ISM	ENSG00000184634.17	ENST00000687382.1	6764	46	53	1569	10	-12	5prime_fragment	FALSE	canonical	0	0	junction_39	31.3198335370595	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAACAGCAGCAACAGCAACA	-4	True	NA	NA	False	NA	NA	NA	71118608	71140755	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_71118854_71119372_71119478_71119685_71119878_71120013_71120171_71120970_71121153_71121326_71121438_71121561_71121817_71122199_71122347_71122507_71122608_71122737_71122875_71123094_71123227_71123593_71123721_71124158_71124389_71124763_71124845_71124975_71125147_71125350_71125496_71125662_71125714_71126035_71126155_71126340_71126485_71126968_71127133_71127335_71127468_71127892_71128121_71128295_71128441_71128597_71128719_71129113_71129216_71129315_71129430_71129679_71129856_71130034_71130215_71131549_71131622_71132072_71132207_71132376_71132539_71132844_71132957_71133122_71133213_71134356_71134467_71134712_71134849_71135091_71135254_71136280_71136656_71136878_71137030_71137186_71137384_71137557_71137636_71137725_71137781_71137855_71137944_71140634
H1_mix_00089414	chrX	+	6875	45	FSM	ENSG00000184634.17	ENST00000690145.1	6739	45	-73	-63	23	0	multi-exon	FALSE	canonical	3	11	junction_39	29.2599050828014	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGTGTGCGAGTTCTGCA	39	False	NA	24	True	AATACA	-18	NA	71118651	71142450	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71118854_71119372_71119478_71119685_71119878_71120013_71120171_71120970_71121153_71121326_71121438_71121561_71121817_71122199_71122347_71122507_71122608_71122737_71122875_71123094_71123227_71123593_71123721_71124158_71124389_71124763_71124845_71124975_71125147_71125350_71125496_71125662_71125714_71126035_71126155_71126340_71126485_71126968_71127133_71127335_71127468_71127892_71128121_71128295_71128441_71128597_71128719_71129113_71129216_71129315_71129430_71129679_71129856_71130034_71130215_71131549_71131622_71132072_71132207_71132376_71132539_71132844_71132957_71133122_71133213_71134356_71134467_71134712_71134849_71135091_71135254_71136280_71136656_71136878_71137030_71137186_71137393_71137560_71137636_71137725_71137944_71140634_71140858_71141229_71141371_71141882_71141965_71142174
H1_mix_00089416	chrX	+	3925	7	FSM	ENSG00000196338.15	ENST00000374051.7	3913	7	-12	0	-10	0	multi-exon	FALSE	canonical	3	50	junction_2	22.2916277258227	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTCCCTTGCACAGGC	-14	True	NA	12	True	AATAAA	-22	NA	71144830	71171201	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71144965_71147549_71148207_71153476_71153537_71155213_71155364_71164142_71164329_71167010_71167801_71169253
H1_mix_00089417	chrX	+	3985	8	FSM	ENSG00000196338.15	ENST00000358741.4	3975	8	-10	0	-10	0	multi-exon	FALSE	canonical	3	29	junction_2	32.3633705769662	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTCCCTTGCACAGGC	-14	True	NA	12	True	AATAAA	-22	NA	71144830	71171201	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71144965_71147549_71148207_71148845_71148906_71153476_71153537_71155213_71155364_71164142_71164329_71167010_71167801_71169253
H1_mix_00089418	chrX	+	1004	4	NNC	ENSG00000147140.17	novel	3208	11	NA	NA	7	-13386	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	5.31245915016974	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCCTGTTTGTGGACTC	24	False	NA	9	True	AATAAA	-18	NA	71254820	71272788	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_71255001_71264841_71265065_71266630_71266728_71272284
H1_mix_00089419	chrX	+	2945	11	FSM	ENSG00000147140.17	ENST00000373841.5	2606	11	-347	8	94	0	multi-exon	FALSE	canonical	3	518	junction_1	640.065496648585	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTAATTTTCTGTGGTG	69	False	NA	24	True	ATTAAA	-13	NA	71283285	71301160	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71283722_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71297939_71298468_71298509_71298706_71298817_71299941
H1_mix_00089420	chrX	+	4698	9	FSM	ENSG00000147140.17	ENST00000679267.1	4678	9	-20	0	0	0	multi-exon	FALSE	canonical	3	2046	junction_2	230.046191013892	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCATCAACCTATTAAAATA	373	False	NA	-5	True	NA	NA	NA	71283589	71301131	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71283722_71284396_71284454_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71298509_71298706
H1_mix_00089421	chrX	+	4915	8	FSM	ENSG00000147140.17	ENST00000677766.1	4895	8	-20	0	0	0	multi-exon	FALSE	canonical	3	2046	junction_2	218.46533372784	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTTAAGCCTTTTAATT	373	False	NA	14	True	ATTAAA	-3	NA	71283589	71301150	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71283722_71284396_71284454_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376
H1_mix_00089422	chrX	+	3226	11	FSM	ENSG00000147140.17	ENST00000473525.2	3206	11	-20	0	0	0	multi-exon	FALSE	canonical	3	2046	junction_2	254.547146909959	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTTAATTTTCTGTGG	373	False	NA	22	True	ATTAAA	-11	NA	71283589	71301158	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71283722_71284396_71284454_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71298509_71298706_71298817_71299941
H1_mix_00089423	chrX	+	2812	13	FSM	ENSG00000147140.17	ENST00000420903.6	2812	13	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	911.735615917977	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTAATTTTCTGTGGTG	373	False	NA	24	True	ATTAAA	-13	NA	71283589	71301160	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71283722_71284396_71284454_71284983_71285098_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71297939_71298468_71298509_71298706_71298817_71299941
H1_mix_00089424	chrX	+	2678	12	FSM	ENSG00000147140.17	ENST00000678660.1	2655	12	-23	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	755.964940811105	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTAATTTTCTGTGGTG	-8	True	NA	24	True	ATTAAA	-13	NA	71283624	71301160	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71283722_71284396_71284454_71290628_71290807_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71297939_71298468_71298509_71298706_71298817_71299941
H1_mix_00089425	chrX	+	2663	12	FSM	ENSG00000147140.17	ENST00000276079.13	2661	12	-2	0	0	0	multi-exon	FALSE	canonical	3	2046	junction_2	245.120479737571	1026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTGGTGTTTTTGAA	0	True	NA	32	True	ATTAAA	-21	NA	71283632	71301168	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71283722_71284396_71284454_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71297939_71298468_71298509_71298706_71298817_71299941
H1_mix_00089428	chrX	+	7655	38	FSM	ENSG00000147133.17	ENST00000423759.6	7599	38	-124	68	11	0	multi-exon	FALSE	canonical	3	31	junction_4	10.7888967083792	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTATATTGTTTGAATT	-5	True	NA	-6	True	GGGGCT	-42	NA	71366232	71465937	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71366495_71367498_71367614_71368053_71368171_71375166_71375287_71376949_71377192_71377602_71377822_71378234_71378454_71378823_71379032_71381742_71381920_71382535_71382664_71382760_71382869_71382990_71383165_71383961_71384136_71384944_71385050_71387260_71387462_71388236_71388379_71388737_71388869_71389584_71389666_71392568_71392719_71392874_71392995_71393300_71393477_71394066_71394246_71397252_71397467_71398571_71398738_71401527_71401740_71406637_71406747_71407573_71407673_71407973_71408152_71421308_71421377_71423116_71423240_71423973_71424067_71424153_71424239_71454169_71454238_71454740_71454858_71458240_71458367_71459551_71459709_71460625_71460804_71463823
H1_mix_00089430	chrX	+	7697	39	FSM	ENSG00000147133.17	ENST00000683782.1	7697	39	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_36	11.9311564014052	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGCAGTAGTGTGGAGAA	27	True	NA	17	True	AATAAA	-14	NA	71366356	71466001	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71366495_71367498_71367614_71368053_71368171_71375166_71375287_71376949_71377192_71377602_71377822_71378234_71378454_71378823_71379032_71381742_71381920_71382535_71382664_71382760_71382869_71382990_71383165_71383961_71384136_71384944_71385050_71387260_71387462_71388236_71388379_71388737_71388869_71389584_71389666_71392568_71392719_71392874_71392995_71393300_71393477_71394066_71394246_71397252_71397467_71398571_71398738_71401527_71401740_71406637_71406747_71407573_71407673_71407973_71408152_71421308_71421377_71423116_71423240_71423973_71424067_71424153_71424239_71454169_71454238_71454740_71454858_71458240_71458367_71459149_71459252_71459551_71459709_71460625_71460804_71463823
H1_mix_00089431	chrX	+	8541	20	FSM	ENSG00000147162.14	ENST00000488174.5	7243	20	-61	-1237	-61	0	multi-exon	FALSE	canonical	3	19	junction_1	94.3436577718548	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGCTGATGTATTTTGTA	662	False	NA	19	True	AATAAA	-19	NA	71533042	71575892	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71533337_71536207_71536359_71537828_71538073_71544566_71548024_71554512_71554593_71555953_71556095_71556679_71556781_71556951_71557106_71557194_71557297_71557492_71557673_71559266_71559426_71559587_71559678_71561774_71561901_71562846_71563018_71563129_71563247_71563328_71563500_71564600_71564754_71567499_71567753_71567992_71568117_71573619
H1_mix_00089432	chrX	+	5457	22	FSM	ENSG00000147162.14	ENST00000373719.8	5435	22	-22	0	-22	0	multi-exon	FALSE	canonical	3	129	junction_4	60.8444356656706	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGCTGATGTATTTTGTA	6	True	NA	19	True	AATAAA	-19	NA	71533081	71575892	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71533337_71536177_71536359_71537828_71538073_71544566_71544636_71547906_71548024_71554512_71554593_71555189_71555386_71555953_71556095_71556679_71556781_71556951_71557106_71557194_71557297_71557492_71557673_71559266_71559426_71559587_71559678_71561774_71561901_71562846_71563018_71563129_71563247_71563328_71563500_71564600_71564754_71567499_71567753_71567992_71568117_71573619
H1_mix_00089433	chrX	+	691	3	FSM	ENSG00000147174.12	ENST00000471950.1	691	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCAGGATTGGCTGCTAC	4742	False	NA	NA	False	NA	NA	NA	71609065	71612854	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71609118_71610680_71610820_71612354
H1_mix_00089437	chrX	+	1564	4	FSM	ENSG00000102309.15	ENST00000664196.1	1323	4	-241	0	82	0	multi-exon	FALSE	canonical	3	885	junction_1	148.236297849076	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGATTCTTAACAGATTA	NA	False	NA	NA	False	AATAAA	-18	NA	72181434	72198343	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_72181829_72186460_72186535_72196784_72196905_72197367
H1_mix_00089438	chrX	+	1209	3	NIC	ENSG00000102309.15	novel	1239	4	NA	NA	0	41	combination_of_known_splicesites	FALSE	canonical	3	423	junction_1	412.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCAGCTGCATTTGATAT	7	True	NA	NA	False	NA	NA	NA	72181756	72198384	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_72181829_72196784_72196905_72197367
H1_mix_00089442	chrX	+	1657	3	FSM	ENSG00000131264.4	ENST00000373514.3	1642	3	-15	0	-15	0	multi-exon	FALSE	canonical	3	11	junction_1	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATACTTGTCTGGCATCAA	NA	False	NA	3	True	AATAAA	-22	NA	73447037	73455171	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_73447756_73453516_73453663_73454378
H1_mix_00089443	chrX	+	6868	6	FSM	ENSG00000204116.12	ENST00000373502.10	6869	6	-8	9	-8	0	multi-exon	FALSE	canonical	3	11	junction_1	3.18747549010185	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTGAATTCTGTGTTTT	16	False	NA	NA	False	AATAAA	-18	NA	73563188	73687102	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_73563581_73577406_73577462_73584416_73584573_73679325_73679383_73679653_73679714_73680954
H1_mix_00089444	chrX	+	1176	1	FSM	ENSG00000230146.1	ENST00000446112.1	1176	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAGACAGAAATAGCTGTT	NA	False	NA	NA	False	NA	NA	NA	73769247	73770423	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_73769200_73770400
H1_mix_00089445	chrX	+	2411	6	FSM	ENSG00000225470.8	ENST00000663027.1	1818	6	-87	-506	16	0	multi-exon	FALSE	canonical	2	9	junction_3	185.513773073591	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTATAAAACTCGCTGA	338	False	NA	8	True	AGTAAA	-27	NA	73944251	74000496	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_73944466_73944583_73944663_73946998_73947375_73994839_73994962_73998767_73998845_73998953
H1_mix_00089447	chrX	+	1129	7	FSM	ENSG00000225470.8	ENST00000671021.1	1109	7	-20	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	183.640651515096	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTTTTGAGATATCTG	-1	True	NA	-7	True	AATAAA	-6	NA	73944321	74004529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_73944466_73944583_73944663_73946998_73947375_73962730_73962802_73994839_73994962_73998767_73998845_74004269
H1_mix_00089448	chrX	+	969	5	FSM	ENSG00000225470.8	ENST00000667573.1	962	5	-7	0	0	0	multi-exon	FALSE	canonical	1	7	junction_3	198.453237564924	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTATATGTGAAATTGAA	397	False	NA	15	True	AATAAA	-28	NA	73944310	74004551	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_73944466_73944583_73944663_73946998_73947375_73998767_73998845_74004269
H1_mix_00089449	chrX	+	5363	6	FSM	ENSG00000225470.8	ENST00000660856.1	5352	6	-11	0	0	0	multi-exon	FALSE	canonical	3	73	junction_4	167.29542731348	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCACTGCAGCCTGGGCG	397	False	NA	NA	False	NA	NA	NA	73944310	74007656	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_73944466_73944583_73944663_73994839_73994962_73998767_73998845_73998953_74000497_74004269
H1_mix_00089450	chrX	+	3571	4	FSM	ENSG00000225470.8	ENST00000660840.1	3571	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	214.991989514855	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACTAAAAATACAGAAAATT	397	False	NA	NA	False	NA	NA	NA	73944310	74007529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_73944466_73944583_73944663_73998767_73998845_74004269
H1_mix_00089451	chrX	+	3483	3	FSM	ENSG00000225470.8	ENST00000669149.1	3463	3	-20	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	250	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACTAAAAATACAGAAAATT	-1	True	NA	NA	False	NA	NA	NA	73944321	74007529	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_73944466_73944583_73944663_74004269
H1_mix_00089452	chrX	+	4630	4	FSM	ENSG00000225470.8	ENST00000668590.1	4628	4	-2	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	222.832273744676	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATACAGAAAATTAGCCA	-1	True	NA	NA	False	NA	NA	NA	73944321	74007534	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_73944466_73944583_73944663_73999354_74000497_74004269
H1_mix_00089453	chrX	+	3885	5	FSM	ENSG00000225470.8	ENST00000655090.1	3950	5	65	0	26	0	multi-exon	FALSE	canonical	3	89	junction_4	178.49562319564	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCGACAAAGACTGTCAAAA	348	False	NA	NA	False	NA	NA	NA	73944261	74007672	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_73944466_73944583_73944663_73994839_73994962_73998767_73998845_74004269
H1_mix_00089454	chrX	+	3771	4	FSM	ENSG00000225470.8	ENST00000660836.1	3758	4	-13	0	0	0	multi-exon	FALSE	canonical	3	115	junction_3	181.267757750793	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGTCAAAAAAAAAAAAAAAA	397	False	NA	NA	False	NA	NA	NA	73944310	74007684	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_73944466_73944583_73944663_73994839_73994962_74004269
H1_mix_00089455	chrX	+	5646	5	FSM	ENSG00000225470.8	ENST00000657179.1	5113	5	5	-538	0	388	multi-exon	FALSE	canonical	3	53	junction_2	193.980024744817	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATTCCATACAAGGGATT	-1	True	NA	NA	False	AATAAA	-45	NA	73944321	74008072	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_73944466_73944583_73944663_73998767_73998845_73998953_74000497_74004269
H1_mix_00089456	chrX	+	900	3	ISM	ENSG00000225470.8	ENST00000415215.1	475	4	-16	-274	0	0	intron_retention	FALSE	canonical	3	257	junction_2	134.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATCTTTGAATAACATTT	6	True	NA	NA	False	AATAAA	-16	NA	73944350	73947704	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_73944466_73944583_73944663_73946998
H1_mix_00089458	chrX	+	463	1	FSM	ENSG00000213695.3	ENST00000426405.1	583	1	-12	132	-12	-132	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCTCATAAAGATTCATTT	NA	False	NA	NA	False	NA	NA	NA	74409505	74409968	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_74409500_74410000
H1_mix_00089459	chrX	+	4128	6	FSM	ENSG00000147100.11	ENST00000587091.6	4128	6	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_3	11.9431989014669	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGGGTATGTATGTTGC	-16	True	NA	20	True	AATAAA	-16	NA	74421492	74533916	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_74422068_74520989_74521135_74524358_74524810_74525749_74525894_74529212_74529442_74531332
H1_mix_00089461	chrX	+	2228	8	FSM	ENSG00000094841.14	ENST00000462237.5	1135	8	-40	-1053	-9	0	multi-exon	TRUE	canonical	3	37	junction_2	58.0197010875247	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTGATATTAAAACATTT	-23	True	NA	-16	True	NA	NA	NA	75274075	75304572	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_75274641_75293471_75293515_75294562_75294621_75296341_75296412_75297490_75297554_75299734_75299897_75300866_75300966_75303404
H1_mix_00089462	chrX	+	2248	7	FSM	ENSG00000094841.14	ENST00000373379.5	2234	7	-14	0	-9	0	multi-exon	FALSE	canonical	3	11	junction_6	57.5065213693195	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTAGCTGATTACTTGA	-23	True	NA	12	True	ATTAAA	-15	NA	75274075	75304600	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_75274641_75293471_75293515_75296341_75296412_75297490_75297554_75299734_75299897_75300866_75301016_75303404
H1_mix_00089463	chrX	+	2483	7	FSM	ENSG00000094841.14	ENST00000373383.9	2474	7	-9	0	-9	0	multi-exon	FALSE	canonical	3	127	junction_2	21.3124898175277	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCATGGCAAATGTTGCT	-23	True	NA	NA	False	AATAAA	-32	NA	75274075	75304885	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_75274641_75293471_75293515_75296341_75296412_75297490_75297554_75299734_75299897_75300866_75300966_75303404
H1_mix_00089465	chrX	+	1546	5	FSM	ENSG00000102390.11	ENST00000373357.3	977	5	-159	-410	-159	292	multi-exon	FALSE	canonical	3	38	junction_4	226.934461904753	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAAACCAGACAGAGTAG	NA	False	NA	NA	False	NA	NA	NA	76172880	76178606	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_76173169_76173584_76173651_76174889_76174950_76175472_76175614_76177615
H1_mix_00089466	chrX	+	1268	6	FSM	ENSG00000102390.11	ENST00000373358.8	1185	6	-201	118	-179	0	multi-exon	FALSE	canonical	3	501	junction_5	25.8487910742456	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATCTATATCTGTGACTG	NA	False	NA	19	True	AATAAA	-16	NA	76172860	76178196	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_76173169_76173584_76173651_76174889_76174950_76175472_76175614_76176880_76176993_76177615
H1_mix_00089467	chrX	+	3656	1	FSM	ENSG00000198934.5	ENST00000361470.4	3633	1	-23	0	-23	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAATGCTAATACACTGAC	-26	True	NA	NA	False	AATAAA	-17	NA	76427686	76431342	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_76427700_76431300
H1_mix_00089468	chrX	+	1669	3	FSM	ENSG00000196468.8	ENST00000439435.3	1666	3	-4	1	-4	-1	multi-exon	FALSE	canonical	3	11	junction_2	6	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTCTGTCTAATTCTATT	NA	False	NA	31	True	AATAAA	-19	NA	77447384	77457277	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_77447949_77454156_77454261_77456276
H1_mix_00089470	chrX	+	685	2	FSM	ENSG00000131174.7	ENST00000475465.1	685	2	0	0	0	0	multi-exon	FALSE	canonical	3	4418	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTTTTGAGA	-23	True	NA	NA	False	NA	NA	NA	77899462	77903196	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_77899594_77902642
H1_mix_00089471	chrX	+	457	3	NNC	ENSG00000131174.7	novel	605	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2209	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTAGGTTTTGTTTCTTTG	-23	True	NA	14	True	AATAAA	-19	NA	77899462	77905385	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_77899594_77902642_77902767_77905183
H1_mix_00089472	chrX	+	458	3	FSM	ENSG00000131174.7	ENST00000650309.2	2444	3	-5	1991	0	0	multi-exon	FALSE	canonical	3	4418	junction_1	103	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTAGGTTTTGTTTCTTTG	-23	True	NA	14	True	AATAAA	-19	NA	77899462	77905385	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_77899594_77902642_77902768_77905183
H1_mix_00089473	chrX	+	432	3	NNC	ENSG00000131174.7	novel	605	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	2206	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTAGGTTTTGTTTCTTTG	-1	True	NA	14	True	AATAAA	-19	NA	77899484	77905385	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_77899594_77902642_77902768_77905187
H1_mix_00089474	chrX	+	505	3	FSM	ENSG00000131174.7	ENST00000647835.1	505	3	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	2245	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCAGCTTCTTAAATAGG	-1	True	NA	90	True	ATTAAA	-10	NA	77899484	77905461	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_77899594_77902649_77902768_77905183
H1_mix_00089475	chrX	+	4812	11	FSM	ENSG00000102144.15	ENST00000373316.5	4812	11	0	0	0	0	multi-exon	FALSE	canonical	3	2846	junction_8	160.155049873552	671	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGCTGTTCTGTAGTTG	0	True	NA	4	True	ATTAAA	-16	NA	78104247	78129295	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_78104406_78109866_78109918_78113743_78113900_78114015_78114161_78117311_78117416_78118050_78118171_78122834_78122950_78123194_78123375_78124873_78125052_78125326_78125426_78125789
H1_mix_00089478	chrX	+	4467	5	FSM	ENSG00000147145.14	ENST00000614823.5	4454	5	-13	0	-2	0	multi-exon	TRUE	canonical	2	6	junction_2	9.22970747098737	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGCAGTCATACTTTGAT	NA	False	NA	11	True	AATAAA	-15	NA	78747706	78758714	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_78748035_78750173_78750224_78750729_78750793_78751209_78751312_78754790
H1_mix_00089480	chrX	+	2334	5	FSM	ENSG00000131171.13	ENST00000481106.5	928	5	-314	-1092	-288	142	multi-exon	FALSE	canonical	3	9	junction_1	290.359583103434	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGGGCTTTTAATCTCAC	52	False	NA	NA	False	AAAAAG	-42	NA	81201813	81298689	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_81202246_81202436_81202577_81276983_81277170_81278330_81278412_81297194
H1_mix_00089481	chrX	+	1764	4	FSM	ENSG00000131171.13	ENST00000373212.6	1764	4	0	0	0	0	multi-exon	FALSE	canonical	3	553	junction_1	20.4613456709637	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATGTGTTCTTGGAGTTT	-19	True	NA	27	True	AATAAA	-23	NA	81202101	81298547	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_81202246_81276983_81277170_81278330_81278412_81297194
H1_mix_00089482	chrX	+	3849	1	FSM	ENSG00000196767.9	ENST00000644024.2	3838	1	-13	2	-13	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTTCTTCTCCTGGTCT	10	False	NA	NA	False	AATAAA	-18	NA	83508276	83512125	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_83508300_83512100
H1_mix_00089483	chrX	+	6470	9	FSM	ENSG00000155008.16	ENST00000373173.7	6480	9	10	0	10	0	multi-exon	FALSE	canonical	2	6	junction_5	5.1234753829798	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTTTTTTGTATATTA	1	True	NA	12	True	AATAAA	-18	NA	85003886	85093315	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_85003928_85046445_85046551_85051388_85051509_85054343_85054399_85055826_85055926_85067126_85067219_85073997_85074112_85074273_85074392_85087589
H1_mix_00089484	chrX	+	5099	2	NNC	ENSG00000155008.16	novel	6480	9	NA	NA	84291	0	intron_retention	FALSE	non_canonical	3	29	junction_1	0	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTTTTTTGTATATTA	NA	False	NA	12	True	AATAAA	-18	NA	85088167	85093315	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_85088818_85088866
H1_mix_00089485	chrX	+	4358	10	NIC	ENSG00000147180.17	novel	4559	11	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_7	49.8318159065392	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATGGTTTTATAAGTTT	9	False	NA	13	True	AATAAA	-15	NA	85243932	85273357	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_85244192_85245902_85246023_85247546_85247652_85255258_85255802_85264274_85264431_85265117_85265256_85267277_85267416_85268293_85268342_85270002_85270147_85270650
H1_mix_00089486	chrX	+	4124	9	FSM	ENSG00000147180.17	ENST00000373165.7	4124	9	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	32.714436797842	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGTTTTATAAGTTTATT	41	False	NA	16	True	AATAAA	-18	NA	85244031	85273360	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_85244192_85245902_85246023_85247546_85247652_85255258_85255802_85264274_85264431_85265117_85265256_85268293_85268342_85270002_85270147_85270650
H1_mix_00089487	chrX	+	4323	10	FSM	ENSG00000147180.17	ENST00000276123.7	2887	10	0	-1436	0	0	multi-exon	FALSE	canonical	3	36	junction_3	54.548653104871	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATGGTTTTATAAGTTT	-9	True	NA	13	True	AATAAA	-15	NA	85244083	85273357	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_85244192_85245902_85246023_85246929_85247184_85247546_85247652_85255258_85255802_85264274_85264431_85265117_85265256_85268293_85268342_85270002_85270147_85270650
H1_mix_00089488	chrX	+	2430	12	FSM	ENSG00000126733.22	ENST00000373125.9	2417	12	-14	1	-14	-1	multi-exon	FALSE	canonical	1	6	junction_2	4.79496981608749	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAATTGTCACTGAGTATT	NA	False	NA	1	True	AATAAA	-15	NA	86148436	86832601	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_86149109_86376823_86376863_86514278_86514392_86651035_86651168_86695020_86695180_86714547_86714721_86739746_86739883_86812855_86813005_86813129_86813278_86814687_86814835_86816033_86816100_86832105
H1_mix_00089489	chrX	+	5960	11	FSM	ENSG00000102271.14	ENST00000373119.9	5765	11	-192	-3	-192	3	multi-exon	FALSE	canonical	3	95	junction_1	16.636105313444	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGACAATGCTTGCTT	126	False	NA	NA	False	AATAAA	-18	NA	87517609	87670053	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_87518316_87613876_87614045_87614433_87614571_87617931_87618129_87622210_87622424_87625609_87625797_87632209_87632435_87633748_87633912_87635562_87635776_87664763_87664936_87666474
H1_mix_00089490	chrX	+	644	2	Intergenic	novelGene_1676	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAAGCCTGTTTGGTGGTC	NA	False	NA	NA	False	AATAAA	-17	NA	87682053	87687603	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_87682278_87687183
H1_mix_00089491	chrX	+	6779	1	Intergenic	novelGene_1675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGCCTGTTTCGTGGTCT	NA	False	NA	9	True	ATTAAA	-18	NA	87681996	87688775	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_87682000_87688800
H1_mix_00089493	chrX	+	4767	6	FSM	ENSG00000102290.23	ENST00000298274.12	4767	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	12.7216351150314	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGAAACCCCGTCTCTTCT	NA	False	NA	NA	False	NA	NA	NA	91779260	91884007	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_91779685_91810472_91810579_91811236_91811296_91835460_91836045_91876780_91879274_91882906
H1_mix_00089494	chrX	+	8217	7	NIC	ENSG00000102290.23	novel	9022	11	NA	NA	-13	3382	combination_of_known_junctions	FALSE	canonical	3	27	junction_6	5.3748384988657	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGCATATAATTAGTATTT	NA	False	NA	85	True	AATACA	-12	NA	91779361	91887389	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_91779685_91809465_91809635_91810472_91810579_91811236_91811296_91835460_91836045_91876780_91879274_91882906
H1_mix_00089499	chrX	+	9394	26	NIC	ENSG00000147202.19	novel	9203	27	NA	NA	-94	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_22	178.579344830246	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTGCTGCCTATGATAA	NA	False	NA	23	True	AATAAA	-19	NA	96684617	97604997	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_96685191_96738585_96738763_96758153_96758259_96881578_96881719_96912327_96912403_96912482_96912553_96916437_96916575_96918508_96918618_96930732_96930844_96937232_96937352_96939265_96939383_96942017_96942137_96945526_96945592_96948934_96949040_96957827_96958149_96965092_96965208_97072940_97073043_97075166_97075262_97099693_97099796_97114725_97114966_97141664_97141795_97247714_97247840_97348115_97348281_97383908_97384045_97429649_97429746_97599252
H1_mix_00089500	chrX	+	3730	27	FSM	ENSG00000147202.19	ENST00000373049.8	3730	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	209.480157510282	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCATTTTGTCTGGTGC	63	False	NA	23	True	AGTAAA	-20	NA	96684711	97469835	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_96685191_96735757_96735791_96738585_96738763_96758153_96758259_96881578_96881719_96912327_96912403_96912482_96912553_96916437_96916575_96918508_96918618_96930732_96930844_96937232_96937352_96939265_96939383_96942017_96942137_96945526_96945592_96948934_96949040_96957827_96958149_96965092_96965208_97072940_97073043_97075166_97075262_97099693_97099796_97114725_97114966_97141664_97141795_97247714_97247840_97348115_97348281_97383908_97384045_97429649_97429746_97469693
H1_mix_00089501	chrX	+	9203	27	FSM	ENSG00000147202.19	ENST00000324765.13	9203	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	174.93097962664	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTGCTGCCTATGATAA	4	True	NA	23	True	AATAAA	-19	NA	96684841	97604997	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_96685191_96735757_96735791_96738585_96738763_96758153_96758259_96881578_96881719_96912327_96912403_96912482_96912553_96916437_96916575_96918508_96918618_96930732_96930844_96937232_96937352_96939265_96939383_96942017_96942137_96945526_96945592_96948934_96949040_96957827_96958149_96965092_96965208_97072940_97073043_97075166_97075262_97099693_97099796_97114725_97114966_97141664_97141795_97247714_97247840_97348115_97348281_97383908_97384045_97429649_97429746_97599252
H1_mix_00089502	chrX	+	3594	28	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	205.175330689952	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCATTTTGTCTGGTGC	31	True	NA	23	True	AGTAAA	-20	NA	96684868	97469835	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_96685191_96735757_96735791_96738585_96738763_96758153_96758259_96763099_96763121_96881578_96881719_96912327_96912403_96912482_96912553_96916437_96916575_96918508_96918618_96930732_96930844_96937232_96937352_96939265_96939383_96942017_96942137_96945526_96945592_96948934_96949040_96957827_96958149_96965092_96965208_97072940_97073043_97075166_97075262_97099693_97099796_97114725_97114966_97141664_97141795_97247714_97247840_97348115_97348281_97383908_97384045_97429649_97429746_97469693
H1_mix_00089503	chrX	+	737	6	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625715	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	333.712451071278	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCATTTTGTCTGGTGC	NA	False	NA	23	True	AGTAAA	-20	NA	97310556	97469835	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_97310659_97346888_97346950_97348080_97348281_97383908_97384045_97429649_97429746_97469693
H1_mix_00089504	chrX	+	781	5	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625715	142	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_1	281.732475053906	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATAGTCTACAATGAATA	NA	False	NA	4	True	AATATA	-20	NA	97310556	97469977	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_97310659_97348117_97348281_97383908_97384045_97429649_97429746_97469693
H1_mix_00089505	chrX	+	670	5	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625721	0	at_least_one_novel_splicesite	FALSE	canonical	3	461	junction_1	128.937969582276	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCATTTTGTCTGGTGC	NA	False	NA	23	True	AGTAAA	-20	NA	97310562	97469835	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_97310659_97348080_97348281_97383908_97384045_97429649_97429746_97469693
H1_mix_00089506	chrX	+	842	6	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625753	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	340.208406715648	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCATTTTGTCTGGTGC	-11	True	NA	23	True	AGTAAA	-20	NA	97310594	97469835	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_97310659_97315689_97315894_97348080_97348281_97383908_97384045_97429649_97429746_97469693
H1_mix_00089507	chrX	+	742	6	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625757	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	349.837333628073	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCATTTTGTCTGGTGC	-7	True	NA	23	True	AGTAAA	-20	NA	97310598	97469835	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_97310659_97326577_97326723_97348117_97348281_97383908_97384045_97429649_97429746_97469693
H1_mix_00089508	chrX	+	2291	4	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625718	1818	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_1	318.814470604248	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCCAGACTGGGCAACGA	NA	False	NA	NA	False	NA	NA	NA	97310559	97471653	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_97310659_97383908_97384045_97429649_97429746_97469693
H1_mix_00089509	chrX	+	803	6	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625732	0	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	321.600124378085	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCATTTTGTCTGGTGC	NA	False	NA	23	True	AGTAAA	-20	NA	97310573	97469835	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_97310659_97346805_97346950_97348080_97348281_97383908_97384045_97429649_97429746_97469693
H1_mix_00089510	chrX	+	720	6	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625767	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	345.643515778902	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCATTTTGTCTGGTGC	3	True	NA	23	True	AGTAAA	-20	NA	97310608	97469835	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_97310659_97315689_97315823_97348117_97348281_97383908_97384045_97429649_97429746_97469693
H1_mix_00089513	chrX	+	1330	6	FSM	ENSG00000281566.3	ENST00000626665.3	1309	6	-21	0	-21	0	multi-exon	FALSE	canonical	0	0	junction_4	24.0466213843026	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGACTAACCTTGCTTGT	-1	True	NA	32	True	AATAAA	-29	NA	98573837	98865564	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_98573933_98578985_98579075_98644527_98644575_98731530_98731578_98785026_98785125_98864610
H1_mix_00089514	chrX	+	1142	4	NIC	ENSG00000281566.3	novel	1309	6	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_3	13.1993265821489	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGACTAACCTTGCTTGT	0	True	NA	32	True	AATAAA	-29	NA	98573838	98865564	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_98573933_98644527_98644575_98731530_98731578_98864610
H1_mix_00089515	chrX	+	3341	4	FSM	ENSG00000281566.3	ENST00000627700.2	625	4	0	-2716	0	2193	multi-exon	FALSE	canonical	3	28	junction_3	11.8977121983832	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAAATTTATGTTAATTA	2	True	NA	57	True	AATAAA	-18	NA	98573874	98867757	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_98573933_98578985_98579075_98644527_98644575_98864610
H1_mix_00089516	chrX	+	3390	5	NIC	ENSG00000281566.3	novel	625	4	NA	NA	0	2181	combination_of_known_splicesites	FALSE	canonical	3	12	junction_3	20.1556443707464	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATATGCATGGTGTGAAAT	2	True	NA	45	True	AATAAA	-6	NA	98573874	98867745	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_98573933_98578985_98579075_98644527_98644575_98841940_98842002_98864610
H1_mix_00089517	chrX	+	1231	5	ISM	ENSG00000000005.6	ENST00000373031.5	1205	7	8672	-2	-16	2	3prime_fragment	FALSE	canonical	3	8	junction_3	3.60555127546399	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGATTGCTGCTGAACAC	248	False	NA	8	True	AATAAA	-21	NA	100593607	100599887	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_100594036_100594260_100594363_100597503_100597658_100599015_100599183_100599507
H1_mix_00089518	chrX	+	2590	14	FSM	ENSG00000101811.14	ENST00000372972.7	2570	14	-20	0	12	0	multi-exon	FALSE	canonical	3	266	junction_5	22.773128564503	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATACATTTCATCCTAT	NA	False	NA	NA	False	AATAAA	-18	NA	100820370	100841520	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_100820475_100821526_100821606_100822250_100822421_100823291_100823429_100823885_100824006_100824119_100824258_100826633_100826758_100828039_100828103_100831514_100831657_100832733_100832910_100833179_100833473_100837338_100837450_100838238_100838365_100840713
H1_mix_00089519	chrX	+	2093	2	FSM	ENSG00000126950.8	ENST00000372930.5	2039	2	-62	8	-62	-8	multi-exon	FALSE	canonical	3	34	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGGAAACTGTCTGGACAA	NA	False	NA	14	True	AATAAA	-15	NA	101078816	101096359	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_101079123_101094572
H1_mix_00089520	chrX	+	3377	23	FSM	ENSG00000102384.14	ENST00000684367.1	3377	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	15.1461884576083	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCAAGGTGGGTGGATC	-4	True	NA	NA	False	NA	NA	NA	101098187	101163795	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_101098235_101098443_101098540_101099808_101099931_101101057_101101297_101102273_101102412_101109472_101109592_101109890_101109999_101120401_101120451_101120737_101120785_101126708_101126799_101127137_101127267_101127497_101127666_101128715_101128837_101129981_101130074_101132189_101132308_101132391_101132457_101140665_101140761_101145063_101145200_101146152_101146278_101147762_101147812_101147942_101148162_101161527_101161570_101162832
H1_mix_00089521	chrX	+	5600	22	FSM	ENSG00000102384.14	ENST00000682095.1	5584	22	-16	0	0	0	multi-exon	FALSE	canonical	3	30	junction_19	11.1361396112916	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTTTTTTGTGCCTATT	-4	True	NA	10	True	AATAAA	-20	NA	101098187	101166126	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_101098249_101098443_101098540_101101057_101101297_101102273_101102412_101109472_101109592_101109890_101109999_101120401_101120451_101120737_101120785_101126708_101126799_101127137_101127267_101127497_101127666_101128715_101128837_101129981_101130074_101132189_101132308_101132391_101132457_101140665_101140761_101145063_101145200_101146152_101146278_101147762_101147812_101147942_101148162_101161527_101161570_101162832
H1_mix_00089523	chrX	+	881	5	FSM	ENSG00000241343.10	ENST00000614077.4	881	5	0	0	0	0	multi-exon	FALSE	canonical	3	5316	junction_4	1300.52393288244	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACACAGTACACTGTAACA	NA	False	NA	5	True	AATAAA	-21	NA	101390889	101396154	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_101391047_101391458_101391565_101391754_101391823_101395334_101395458_101395727
H1_mix_00089524	chrX	+	569	2	FSM	ENSG00000241343.10	ENST00000491851.5	547	2	-22	0	0	0	multi-exon	FALSE	canonical	3	7209	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATGCAACTCATGTCTGA	-4	True	NA	NA	False	NA	NA	NA	101390988	101391969	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_101391047_101391458
H1_mix_00089525	chrX	+	2356	3	FSM	ENSG00000241343.10	ENST00000465340.5	2240	3	-116	0	5	0	multi-exon	FALSE	canonical	3	7209	junction_1	818	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACATAAGGAAATAAAA	NA	False	NA	NA	False	AAAAAG	-9	NA	101390894	101393852	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_101391047_101391458_101391565_101391754
H1_mix_00089526	chrX	+	691	4	FSM	ENSG00000241343.10	ENST00000392994.7	691	4	0	0	0	0	multi-exon	FALSE	canonical	3	7209	junction_1	668.596706210519	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTCATTTGTTTGCTGTT	-4	True	NA	23	True	AATAAA	-17	NA	101390988	101395793	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_101391047_101391458_101391565_101391754_101391823_101395334
H1_mix_00089527	chrX	+	594	4	FSM	ENSG00000257529.5	ENST00000409338.5	572	4	-22	0	-22	0	multi-exon	FALSE	canonical	0	0	junction_3	3842.45584085086	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCTGATACTGCCAACGA	-4	True	NA	NA	False	NA	NA	NA	101390988	101412297	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_101391047_101391458_101391565_101391754_101391823_101411935
H1_mix_00089528	chrX	+	710	4	FSM	ENSG00000241343.10	ENST00000465744.5	710	4	0	0	0	0	multi-exon	FALSE	canonical	3	5316	junction_3	1499.43863569745	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCATTTGTTTGCTGTTCA	121	False	NA	25	True	AATAAA	-19	NA	101391113	101395795	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_101391565_101391754_101391823_101395334_101395458_101395727
H1_mix_00089529	chrX	+	697	5	FSM	ENSG00000241343.10	ENST00000471855.1	399	5	-307	9	5	0	multi-exon	FALSE	canonical	3	128	junction_1	3395.84152861997	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTTCACTTCATTTGTT	NA	False	NA	16	True	AATAAA	-10	NA	101390894	101395786	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_101391236_101391458_101391565_101391754_101391823_101395334_101395458_101395727
H1_mix_00089531	chrX	+	2296	2	FSM	ENSG00000126945.9	ENST00000316594.6	2296	2	0	0	0	0	multi-exon	FALSE	canonical	3	921	junction_1	0	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAACTGATTGATTTTT	-4	True	NA	28	True	AATAAA	-26	NA	101408221	101414133	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_101408320_101411935
H1_mix_00089532	chrX	+	2284	2	NNC	ENSG00000126945.9	novel	2296	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	117	junction_1	0	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAACTGATTGATTTTT	-4	True	NA	28	True	AATAAA	-26	NA	101408221	101414133	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_101408308_101411935
H1_mix_00089534	chrX	+	377	4	FSM	ENSG00000196440.12	ENST00000430461.5	403	4	26	0	25	0	multi-exon	FALSE	canonical	2	4	junction_3	2.86744175568088	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATTAGAAAAACAATTTTA	41	False	NA	NA	False	NA	NA	NA	101418323	101446132	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_101418371_101418909_101419001_101444051_101444156_101445997
H1_mix_00089535	chrX	+	2428	11	FSM	ENSG00000196440.12	ENST00000445416.5	2872	11	174	270	-5	-270	multi-exon	FALSE	canonical	1	1	junction_10	6.62193325245732	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACACCCCTCCTGCGCAG	-11	True	NA	NA	False	NA	NA	NA	101485427	101516684	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_101485531_101486022_101486093_101487192_101487273_101487607_101487692_101488043_101488100_101498144_101499367_101504936_101505356_101509358_101509428_101509589_101509679_101511024_101511056_101516479
H1_mix_00089536	chrX	+	3797	13	FSM	ENSG00000196440.12	ENST00000354842.5	3788	13	-9	0	-9	0	multi-exon	FALSE	canonical	3	7	junction_8	4.76678321535836	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTAGATTTTTTTACTG	-5	True	NA	11	True	ATTAAA	-16	NA	101485465	101533459	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_101485531_101486022_101486093_101487192_101487273_101487607_101487692_101488043_101488100_101488443_101489316_101498144_101499367_101504936_101505356_101509363_101509428_101509589_101509679_101511024_101511056_101531643_101532013_101533083
H1_mix_00089538	chrX	+	2125	4	FSM	ENSG00000126947.13	ENST00000372829.8	2125	4	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_1	22.7596133534821	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTTGTCCTTGTCCTTGT	-8	True	NA	29	True	AATAAA	-30	NA	101550546	101554700	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_101550661_101550970_101551025_101551568_101551634_101552808
H1_mix_00089539	chrX	+	2111	4	NNC	ENSG00000126947.13	novel	2125	4	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_1	73.1087470066947	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTTGTCCTTGTCCTTGT	3	True	NA	29	True	AATAAA	-30	NA	101550557	101554700	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_101550661_101550973_101551025_101551568_101551634_101552808
H1_mix_00089540	chrX	+	1140	1	FSM	ENSG00000204072.3	ENST00000602449.1	655	1	-487	2	20	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCATGGTCCTTGTCCTT	NA	False	NA	NA	False	AATAAA	-26	NA	101597529	101598669	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_101597500_101598700
H1_mix_00089541	chrX	+	3929	5	FSM	ENSG00000102401.20	ENST00000537169.1	3318	5	-611	0	-47	0	multi-exon	FALSE	canonical	2	6	junction_1	75.4730912312461	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTACTGTGTAAAGTTCTA	NA	False	NA	25	True	AATAAA	-35	NA	101622749	101627841	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_101623431_101623785_101623894_101624157_101624219_101624479_101624551_101624833
H1_mix_00089542	chrX	+	3386	5	FSM	ENSG00000102401.20	ENST00000471229.7	3348	5	-40	2	-16	0	multi-exon	FALSE	canonical	3	87	junction_1	40.8839821935193	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTACTGTGTAAAGTTCTA	NA	False	NA	25	True	AATAAA	-35	NA	101623110	101627841	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_101623277_101623813_101623894_101624157_101624219_101624479_101624551_101624833
H1_mix_00089543	chrX	+	3775	5	FSM	ENSG00000102401.20	ENST00000341189.8	3730	5	-47	2	-47	0	multi-exon	FALSE	canonical	3	97	junction_1	36.6776498701866	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTACTGTGTAAAGTTCTA	NA	False	NA	25	True	AATAAA	-35	NA	101622749	101627841	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_101623277_101623785_101623894_101624157_101624219_101624479_101624551_101624833
H1_mix_00089545	chrX	+	1148	3	FSM	ENSG00000184905.9	ENST00000372780.6	1110	3	-38	0	-38	0	multi-exon	TRUE	canonical	3	163	junction_2	5.5	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACAGAATCTGTCTGTTT	11	False	NA	17	True	AATAAA	-17	NA	102125640	102127712	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_102125807_102126372_102126446_102126803
H1_mix_00089546	chrX	+	1071	6	FSM	ENSG00000271147.8	ENST00000466616.5	964	6	-117	10	-103	0	multi-exon	FALSE	canonical	3	12	junction_5	37.992630864419	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATAGCAATCTTAATGAT	203	False	NA	4	True	ATTAAA	-7	NA	102599408	102650135	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_102599848_102601463_102601510_102601879_102601978_102605481_102605654_102639399_102639534_102649953
H1_mix_00089548	chrX	+	2637	3	FSM	ENSG00000125962.16	ENST00000479502.2	2636	3	-1	0	-1	0	multi-exon	FALSE	canonical	3	88	junction_1	11.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCCTAGTTCTTCAGC	9	True	NA	26	True	AATAAA	-25	NA	102599536	102604159	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_102599848_102601463_102601510_102601879
H1_mix_00089549	chrX	+	2603	5	ISM	ENSG00000125962.16	ENST00000246174.6	2899	6	371	6	1	0	3prime_fragment	FALSE	canonical	3	30	junction_1	32.3370917059652	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAATATTGTCCTAGTTC	11	True	NA	20	True	AATAAA	-19	NA	102599538	102604153	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_102599573_102599711_102599848_102600919_102601033_102601463_102601510_102601879
H1_mix_00089552	chrX	+	3852	5	FSM	ENSG00000158301.20	ENST00000483720.7	3536	5	-318	2	-315	0	multi-exon	TRUE	canonical	0	0	junction_1	33.3204141630923	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAAGTGACCCTTCTTCAG	99	False	NA	16	True	AATAAA	-19	NA	102712129	102717731	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_102712553_102713129_102713218_102713781_102713850_102714188_102714267_102714536
H1_mix_00089553	chrX	+	3974	3	FSM	ENSG00000198908.12	ENST00000361229.8	3974	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	10	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGAATCACTTAATATT	-10	True	NA	22	True	AATAAA	-18	NA	102720725	102752441	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_102720822_102720956_102721092_102748698
H1_mix_00089556	chrX	+	5163	3	FSM	ENSG00000198908.12	ENST00000447531.5	4031	3	-38	-1094	-38	-8	multi-exon	FALSE	canonical	0	0	junction_1	42.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACTTATTTAAGTCTCCT	NA	False	NA	-6	True	AATAAA	-8	NA	102745940	102753532	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_102746175_102747816_102747912_102748698
H1_mix_00089558	chrX	+	861	6	FSM	ENSG00000223546.8	ENST00000420471.5	838	6	-23	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	4.4988887516808	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTGAGTGAGTACGCAT	-23	True	NA	NA	False	NA	NA	NA	102769157	102839964	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_102769342_102770351_102770421_102816991_102817083_102825992_102826170_102826968_102827145_102839800
H1_mix_00089559	chrX	+	2411	9	NIC	ENSG00000223546.8	novel	2101	8	NA	NA	0	6	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	7.31330123815504	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCTTTTTGTGAAAATA	-20	True	NA	NA	False	AATAAA	-22	NA	102769160	102885412	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_102769342_102770351_102770421_102816991_102817083_102825992_102826170_102826968_102827145_102839800_102839973_102845856_102846021_102865041_102865153_102884142
H1_mix_00089562	chrX	+	1312	3	FSM	ENSG00000102409.10	ENST00000372695.6	1312	3	0	0	0	0	multi-exon	FALSE	canonical	3	738	junction_1	17.5	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGACTGATGATTATAGGA	-10	True	NA	66	True	ATTAAA	-25	NA	103215107	103217246	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103215239_103215681_103215765_103216148
H1_mix_00089563	chrX	+	1151	3	FSM	ENSG00000182916.8	ENST00000332431.5	1134	3	-17	0	-7	0	multi-exon	FALSE	canonical	3	67	junction_1	10.5	743	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACGTTTAAGACTCAGTC	-6	True	NA	NA	False	AATAAA	-20	NA	103330221	103332326	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103330305_103330922_103331041_103331376
H1_mix_00089564	chrX	+	1045	3	FSM	ENSG00000185222.10	ENST00000372661.6	1028	3	-17	0	0	0	multi-exon	FALSE	canonical	3	970	junction_2	29.5	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAACAAGCAGCACGTATTA	-10	True	NA	6	True	AATAAA	-18	NA	103356488	103358462	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103356607_103357082_103357162_103357614
H1_mix_00089565	chrX	+	1353	3	FSM	ENSG00000166681.14	ENST00000372645.3	913	3	-184	-256	-184	169	multi-exon	FALSE	canonical	3	1146	junction_2	2535	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCTACTCGGGAGGCTGA	NA	False	NA	NA	False	AATACA	-38	NA	103376210	103378333	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103376614_103377027_103377107_103377462
H1_mix_00089566	chrX	+	810	3	FSM	ENSG00000166681.14	ENST00000361298.9	810	3	0	0	0	0	multi-exon	FALSE	canonical	3	4923	junction_2	646.5	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGAACATTTCTGTGTG	1	True	NA	135	True	ATTAAA	-17	NA	103376537	103378164	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103376614_103377027_103377107_103377509
H1_mix_00089567	chrX	+	759	2	FSM	ENSG00000166681.14	ENST00000372634.1	753	2	0	-6	0	0	multi-exon	FALSE	canonical	3	4923	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTTATTGTCTCATTAA	0	True	NA	48	True	AATAAA	-21	NA	103376915	103378077	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103377107_103377509
H1_mix_00089568	chrX	+	1135	3	FSM	ENSG00000133142.19	ENST00000468024.5	1135	3	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_1	483	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGGCATCAGTACATTT	-31	True	NA	15	True	ATTAAA	-23	NA	103585491	103587518	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103585684_103586218_103586292_103586648
H1_mix_00089569	chrX	+	1287	3	FSM	ENSG00000133142.19	ENST00000472484.6	1264	3	-23	0	0	0	multi-exon	FALSE	canonical	3	1025	junction_2	42.5	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGAATATTTGAATTTCA	-31	True	NA	16	True	AATAAA	-19	NA	103585491	103587729	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103585625_103586218_103586292_103586648
H1_mix_00089570	chrX	+	1581	3	FSM	ENSG00000133142.19	ENST00000472745.1	1571	3	-10	0	0	0	multi-exon	TRUE	canonical	3	88	junction_1	468.5	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTCATAAAAATAATAAAATA	0	True	NA	-19	True	AAAACA	-11	NA	103585522	103587694	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103585625_103585858_103586292_103586648
H1_mix_00089571	chrX	+	906	2	FSM	ENSG00000133142.19	ENST00000434216.2	891	2	-15	0	0	0	multi-exon	FALSE	canonical	3	1025	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAAAACAGGAGATGAGGA	40	True	NA	-2	True	AAAACA	-3	NA	103585562	103586825	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103586292_103586648
H1_mix_00089572	chrX	+	1008	3	FSM	ENSG00000133142.19	ENST00000494801.5	1008	3	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_2	452	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGTACATTTTTGTAAAA	40	True	NA	23	True	ATTAAA	-31	NA	103585562	103587526	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103585625_103586218_103586292_103586653
H1_mix_00089575	chrX	+	1142	3	FSM	ENSG00000196507.11	ENST00000243286.7	1124	3	-18	0	-18	0	multi-exon	FALSE	canonical	3	43	junction_1	45.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATACAGTATCAGCCCGTT	NA	False	NA	15	True	AATAAA	-31	NA	103607887	103609926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103608071_103608603_103608674_103609037
H1_mix_00089576	chrX	+	1056	3	FSM	ENSG00000196507.11	ENST00000372627.10	1056	3	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	8	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACAGTATCAGCCCGTTT	16	True	NA	16	True	AATAAA	-32	NA	103607962	103609927	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103608059_103608603_103608674_103609037
H1_mix_00089577	chrX	+	1261	3	FSM	ENSG00000172465.14	ENST00000372624.3	1164	3	-99	2	-75	-2	multi-exon	FALSE	canonical	1	3	junction_1	5.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGAATCCTATGTTTTTT	-2	True	NA	NA	False	AATAAA	-22	NA	103628899	103630951	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103629026_103629493_103629562_103629884
H1_mix_00089579	chrX	+	3430	9	NNC	ENSG00000123560.14	novel	2896	7	NA	NA	-31099	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_2	48.4327820282915	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGTGTCCTTTGAGTGAA	12	False	NA	14	True	AATAAA	-23	NA	103742618	103792619	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_103743108_103746874_103746923_103776852_103777000_103785581_103785769_103786464_103786622_103787797_103787967_103788436_103788511_103789332_103789399_103790526
H1_mix_00089580	chrX	+	3619	10	NNC	ENSG00000123560.14	novel	2896	7	NA	NA	-31136	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_2	53.8578375602536	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGTGTCCTTTGAGTGAA	4	False	NA	14	True	AATAAA	-23	NA	103742581	103792619	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_103743108_103746874_103746923_103774216_103774369_103776852_103777000_103785581_103785769_103786464_103786622_103787797_103787967_103788436_103788511_103789332_103789399_103790526
H1_mix_00089581	chrX	+	3382	8	NNC	ENSG00000123560.14	novel	2896	7	NA	NA	-31099	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	54.7733735402485	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGTGTCCTTTGAGTGAA	12	False	NA	14	True	AATAAA	-23	NA	103742618	103792619	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_103743108_103776852_103777000_103785581_103785769_103786464_103786622_103787797_103787967_103788436_103788511_103789332_103789399_103790526
H1_mix_00089582	chrX	+	2907	7	FSM	ENSG00000123560.14	ENST00000619236.1	2896	7	-11	0	-1	0	multi-exon	FALSE	canonical	3	122	junction_6	24.7549097262655	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGTGTCCTTTGAGTGAA	-2	True	NA	14	True	AATAAA	-23	NA	103776838	103792619	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103777000_103785581_103785769_103786464_103786622_103787797_103787967_103788436_103788511_103789332_103789399_103790526
H1_mix_00089585	chrX	+	1669	4	FSM	ENSG00000158427.15	ENST00000419165.5	1666	4	-3	0	-3	0	multi-exon	FALSE	canonical	3	4	junction_1	117.740769867064	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCTGTGGTTCATTCTG	5	True	NA	NA	False	AATAAA	-25	NA	103918892	103965987	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103919293_103962020_103962724_103964505_103964623_103965538
H1_mix_00089588	chrX	+	2186	3	FSM	ENSG00000158427.15	ENST00000436583.5	2186	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	111.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTGACTCTGTGGTTC	21	False	NA	NA	False	AATAAA	-19	NA	103962668	103965981	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103964295_103964505_103964623_103965538
H1_mix_00089589	chrX	+	1361	4	FSM	ENSG00000166707.12	ENST00000422784.5	1241	4	-96	-24	-63	24	multi-exon	FALSE	canonical	3	12	junction_2	1.24721912892465	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAGAAAGATAAAGAAAA	NA	False	NA	34	True	TATAAA	-32	NA	104112447	104115866	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_104113002_104113194_104113247_104113433_104113574_104115251
H1_mix_00089590	chrX	+	2940	3	FSM	ENSG00000166707.12	ENST00000650639.1	2940	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCATGTCTCTGTGTGATG	-7	True	NA	10	True	TATAAA	-8	NA	104112522	104115842	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_104113002_104113194_104113247_104113433
H1_mix_00089591	chrX	+	7640	6	FSM	ENSG00000123575.9	ENST00000493442.2	7624	6	-21	5	-21	-5	multi-exon	FALSE	canonical	3	134	junction_5	13.6381816969859	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAATGTGCGTGTGTGTGT	6	True	NA	19	True	AATAAA	-19	NA	104166431	104195897	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_104166983_104175622_104175843_104186065_104186216_104186459_104186622_104188039_104188307_104189607
H1_mix_00089592	chrX	+	6693	4	FSM	ENSG00000123575.9	ENST00000299906.5	2237	4	0	-4456	0	0	multi-exon	FALSE	canonical	3	8	junction_3	74.7454941042528	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCGTGTGTGTGTTTCTT	NA	False	NA	24	True	AATAAA	-24	NA	104186117	104195902	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_104186216_104186459_104186622_104188039_104188178_104189607
H1_mix_00089593	chrX	+	7915	28	NIC	ENSG00000123572.17	novel	8066	29	NA	NA	-17	0	combination_of_known_splicesites	TRUE	canonical	2	7	junction_12	3.46093226258479	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGTTGATGTCATTATTGA	8	False	NA	7	True	AATAAA	-14	NA	105822521	105958610	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_105822903_105831053_105831120_105880198_105880256_105881707_105881780_105888293_105888420_105893831_105893943_105895432_105895524_105898583_105898715_105900617_105900673_105905264_105905344_105906413_105906590_105908239_105908304_105908726_105909883_105912647_105912756_105915729_105915798_105917577_105917673_105921963_105922062_105923117_105923483_105924694_105925032_105934257_105934445_105935169_105935326_105937438_105937583_105939873_105940033_105943940_105944042_105946314_105946465_105949598_105949735_105953033_105953174_105955504
H1_mix_00089595	chrX	+	3893	14	FSM	ENSG00000147231.14	ENST00000372548.9	3852	14	-43	2	5	0	multi-exon	TRUE	canonical	3	16	junction_3	7.15095061334898	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAACTTTTTGGTCTCCTG	-27	True	NA	4	True	ATTAAA	-14	NA	106611934	106679437	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_106612724_106622650_106622794_106625089_106625283_106632624_106632734_106632931_106633024_106633129_106633253_106636542_106636648_106637759_106637925_106639526_106639688_106640551_106640722_106648312_106648387_106662014_106662306_106669162_106669331_106678127
H1_mix_00089596	chrX	+	2778	7	FSM	ENSG00000133135.14	ENST00000255499.3	2803	7	2	23	2	0	multi-exon	FALSE	canonical	3	19	junction_6	2.87228132326901	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGTCTGGTGTTAGTT	-3	True	NA	8	True	AATAAA	-15	NA	106726702	106796993	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_106727398_106772912_106773161_106785064_106785137_106787917_106788001_106790185_106790283_106791065_106791235_106795579
H1_mix_00089597	chrX	+	6558	7	FSM	ENSG00000133138.20	ENST00000481617.6	4098	7	-3	-2457	-3	2457	multi-exon	FALSE	canonical	2	8	junction_1	3.39934634239519	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTGCCTGATGCTTTT	-13	True	NA	NA	False	NA	NA	NA	106802701	106832540	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_106802984_106818662_106818774_106820876_106820996_106821976_106822203_106823225_106823467_106826029_106826238_106827169
H1_mix_00089602	chrX	+	2070	7	FSM	ENSG00000147224.13	ENST00000372435.10	2070	7	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_3	23.0120741254576	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGGTCTGTATCATACA	6	True	NA	19	True	AATAAA	-19	NA	107628509	107651026	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_107628751_107639294_107639479_107640901_107641001_107642365_107642491_107645176_107645351_107647605_107647766_107649939
H1_mix_00089603	chrX	+	2295	13	FSM	ENSG00000101844.18	ENST00000372232.8	2205	13	-90	0	20	0	multi-exon	FALSE	canonical	3	14	junction_1	4.60901893634161	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTTGACAGCCATATTT	13	False	NA	14	True	AATAAA	-22	NA	108091687	108154671	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_108091837_108126076_108126188_108128780_108128853_108131259_108131359_108134056_108134159_108134338_108134412_108137090_108137171_108137803_108137992_108138112_108138192_108150151_108150298_108151801_108151859_108152978_108153088_108153641
H1_mix_00089605	chrX	+	6531	53	FSM	ENSG00000188153.14	ENST00000328300.11	6531	53	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_42	53.2698694768707	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTTGTGTATCTCTTC	19	True	NA	22	True	ATTAAA	-19	NA	108439837	108697545	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_108440207_108539745_108539806_108559063_108559154_108563881_108563927_108568628_108568674_108568758_108568822_108571412_108571467_108571810_108571838_108573573_108573655_108575909_108575973_108577951_108577988_108578077_108578120_108578290_108578384_108580532_108580587_108580681_108580739_108580982_108581028_108582883_108582938_108584483_108584526_108586614_108586748_108591057_108591232_108591560_108591645_108595508_108595602_108596997_108597069_108597376_108597569_108598701_108598871_108601392_108601486_108601884_108601990_108602963_108603062_108606741_108606893_108614910_108615025_108620258_108620427_108621802_108621893_108622675_108622826_108624235_108624335_108625704_108625795_108626209_108626350_108655330_108655458_108665506_108665588_108666495_108666595_108667132_108667184_108668318_108668505_108670227_108670237_108674744_108674754_108677499_108677634_108680678_108680752_108680884_108680957_108681759_108681889_108686030_108686130_108687481_108687695_108692747_108692926_108694806_108694922_108695266_108695440_108696296
H1_mix_00089607	chrX	+	6427	51	FSM	ENSG00000188153.14	ENST00000361603.7	6427	51	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_41	48.9054761759867	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTTGTGTATCTCTTC	45	False	NA	22	True	ATTAAA	-19	NA	108439923	108697545	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_108440207_108539745_108539806_108559063_108559154_108563881_108563927_108568628_108568674_108568758_108568822_108571412_108571467_108571810_108571838_108573573_108573655_108575909_108575973_108577951_108577988_108578077_108578120_108578290_108578384_108580532_108580587_108580681_108580739_108580982_108581028_108582883_108582938_108584483_108584526_108586614_108586748_108591057_108591232_108591560_108591645_108595508_108595602_108596997_108597069_108597376_108597569_108598701_108598871_108601392_108601486_108601884_108601990_108602963_108603062_108606741_108606893_108614910_108615025_108620258_108620427_108621802_108621893_108622675_108622826_108624235_108624335_108625704_108625795_108626209_108626350_108655330_108655458_108665506_108665588_108666495_108666595_108667132_108667184_108668318_108668505_108677499_108677634_108680678_108680752_108680884_108680957_108681759_108681889_108686030_108686130_108687481_108687695_108692747_108692926_108694806_108694922_108695266_108695440_108696296
H1_mix_00089609	chrX	+	1789	8	NIC	ENSG00000188153.14	novel	6427	51	NA	NA	-8649	-4	combination_of_known_junctions	FALSE	canonical	2	5	junction_7	70.9483859533658	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCTGGTTTCTTTGTTT	2679	False	NA	-2	True	AATAAA	-9	NA	108614026	108626551	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_108615025_108620258_108620427_108621802_108621893_108622675_108622826_108624235_108624335_108625704_108625795_108626209_108626350_108626497
H1_mix_00089615	chrX	+	2602	4	FSM	ENSG00000101888.12	ENST00000372106.6	2602	4	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	5.31245915016974	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTTTTAAGGTCTTTTG	-7	True	NA	27	True	AATAAA	-28	NA	109536843	109544698	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_109537022_109538044_109538132_109541474_109541620_109542506
H1_mix_00089616	chrX	+	2485	4	FSM	ENSG00000101888.12	ENST00000372103.1	1085	4	78	-1478	78	0	multi-exon	FALSE	canonical	3	28	junction_1	55.934485486743	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGATTTTCTCAAGATTGT	-20	True	NA	13	True	AATAAA	-14	NA	109537195	109544684	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_109537271_109538044_109538132_109541474_109541620_109542506
H1_mix_00089617	chrX	+	4982	6	FSM	ENSG00000157600.12	ENST00000372072.7	4975	6	-7	0	-3	0	multi-exon	FALSE	canonical	0	0	junction_1	4.57820925690384	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACCCAGGAGTCCTGGCC	NA	False	NA	13	True	ATTAAA	-10	NA	110002627	110177784	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_110002773_110067346_110067397_110109079_110109147_110144797_110144877_110171419_110171521_110173244
H1_mix_00089618	chrX	+	5567	7	FSM	ENSG00000157600.12	ENST00000372073.5	5567	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	3.29983164553722	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGAGTCCTGGCCTTGC	4	True	NA	17	True	ATTAAA	-14	NA	110003094	110177788	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_110003157_110003500_110004165_110067346_110067397_110109079_110109147_110144797_110144877_110171419_110171521_110173244
H1_mix_00089619	chrX	+	2502	1	FSM	ENSG00000225366.5	ENST00000602699.1	2710	1	117	91	117	-91	mono-exon	FALSE	NA	NA	NA	NA	NA	279	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCTAGCAGGCAAGGAACA	NA	False	NA	NA	False	AGTAAA	-43	NA	110520428	110522930	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_110520400_110522900
H1_mix_00089620	chrX	+	6726	5	ISM	ENSG00000077264.16	ENST00000372007.10	9126	18	-49	98158	-49	-23213	5prime_fragment	FALSE	canonical	3	25	junction_1	7.64852927038918	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTATGCAGTCTTTCTTTG	-29	True	NA	6	True	AATAAA	-19	NA	111096141	111129203	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_111096416_111097389_111097457_111097574_111097685_111103158_111103307_111123076
H1_mix_00089621	chrX	+	5650	6	NNC	ENSG00000077264.16	novel	9126	18	NA	NA	-38	-23306	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	8.35703296631047	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTATGGTCTTGTCAAT	-18	True	NA	-87	True	ATTAAA	-16	NA	111096152	111129110	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_111096416_111097389_111097457_111097574_111097685_111103158_111103307_111123076_111123279_111124250
H1_mix_00089624	chrX	+	2826	4	FSM	ENSG00000101901.12	ENST00000371979.7	2770	4	0	-56	0	56	multi-exon	FALSE	canonical	3	47	junction_1	20.5426385841741	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTTGATATTAATGAGTA	NA	False	NA	NA	False	NA	NA	NA	111681117	111690228	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_111681300_111682131_111682295_111684964_111685104_111687886
H1_mix_00089625	chrX	+	4285	27	NIC	ENSG00000101901.12	novel	4175	27	NA	NA	0	0	intron_retention	FALSE	canonical	3	16	junction_17	13.6501078305991	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAACGAGTGGGATTTTTT	NA	False	NA	15	True	AATAAA	-20	NA	111681117	111760644	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_111681425_111682131_111682295_111684964_111685104_111708026_111708394_111708964_111709049_111711674_111711726_111712483_111712531_111713224_111713298_111717845_111717928_111718111_111718275_111720094_111720171_111721602_111721712_111722792_111722858_111723797_111723899_111724933_111725062_111726808_111727056_111727331_111727446_111727613_111727771_111728184_111728306_111730394_111730428_111730524_111730581_111735050_111735123_111736713_111736880_111744667_111744905_111752789_111752831_111757587_111757763_111759733
H1_mix_00089626	chrX	+	2977	5	FSM	ENSG00000101901.12	ENST00000473389.5	693	5	-184	-2100	-113	56	multi-exon	FALSE	canonical	3	9	junction_3	34.1787580230763	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTTGATATTAATGAGTA	NA	False	NA	NA	False	NA	NA	NA	111681004	111690228	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_111681300_111682131_111682295_111684964_111685104_111686136_111686175_111687886
H1_mix_00089627	chrX	+	4113	27	FSM	ENSG00000101901.12	ENST00000394780.8	4113	27	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_17	13.4541188343744	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTGGGATTTTTTCTTTT	-31	True	NA	20	True	AATAAA	-25	NA	111681169	111760649	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_111681300_111682131_111682295_111684964_111685104_111708026_111708394_111708964_111709049_111711674_111711726_111712483_111712531_111713224_111713298_111717845_111717928_111718111_111718275_111720094_111720171_111721602_111721712_111722792_111722858_111723797_111723899_111724933_111725062_111726808_111727056_111727331_111727446_111727613_111727771_111728184_111728306_111730394_111730428_111730524_111730581_111735050_111735123_111736713_111736880_111744667_111744905_111752789_111752831_111757587_111757763_111759733
H1_mix_00089631	chrX	+	811	3	FSM	ENSG00000288595.1	ENST00000674257.1	811	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	42	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTGCCTCGGTCTCTTT	0	True	NA	3	True	AATAAA	-18	NA	114040387	114050858	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_114040637_114042335_114042534_114050494
H1_mix_00089632	chrX	+	648	2	ISM	ENSG00000288595.1	ENST00000674257.1	811	3	72	8052	0	-8052	5prime_fragment	FALSE	canonical	3	99	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCCGCCCTTCTTCCCA	72	False	NA	NA	False	ACTAAA	-42	NA	114040459	114042806	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_114040637_114042335
H1_mix_00089633	chrX	+	3724	3	FSM	ENSG00000288595.1	ENST00000674440.1	503	3	0	-3221	0	3221	multi-exon	FALSE	canonical	3	4	junction_2	47.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCTGTATGGGTAGATGC	72	False	NA	NA	False	GATAAA	-14	NA	114040459	114058999	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_114040637_114042335_114042534_114055650
H1_mix_00089634	chrX	+	4648	6	FSM	ENSG00000147246.10	ENST00000371950.3	4652	6	4	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.93938769133981	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAATATGTCACATGTCTT	3	True	NA	9	True	ATTAAA	-15	NA	114584085	114910061	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_114584660_114613814_114613882_114726857_114726972_114731293_114731608_114848002_114848109_114906588
H1_mix_00089636	chrX	+	3288	16	FSM	ENSG00000102024.19	ENST00000355899.8	3288	16	0	0	0	0	multi-exon	TRUE	canonical	3	1769	junction_8	166.852296624556	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTATCCAGTTCCTGC	-9	True	NA	23	True	AGTAAA	-25	NA	115561173	115650861	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_115561261_115610242_115610324_115622245_115622410_115629197_115629328_115629834_115629968_115633999_115634082_115634880_115635047_115636835_115636979_115640407_115640504_115643312_115643509_115645020_115645100_115646071_115646187_115646401_115646536_115647549_115647674_115647892_115648018_115649428
H1_mix_00089637	chrX	+	469	4	FSM	ENSG00000102024.19	ENST00000466150.1	561	4	92	0	92	0	multi-exon	FALSE	canonical	3	1869	junction_1	126.83935596739	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCGAAACTGGGAGCCAAC	3451	False	NA	NA	False	AATAAA	-8	NA	115640395	115646157	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_115640504_115643312_115643509_115645020_115645100_115646071
H1_mix_00089640	chrX	+	280	2	FSM	ENSG00000229335.2	ENST00000415394.1	280	2	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTATGTGTTCTTATTA	-1	True	NA	NA	False	NA	NA	NA	115841009	115843050	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_115841079_115842839
H1_mix_00089641	chrX	+	4129	20	FSM	ENSG00000131725.14	ENST00000254029.8	4114	20	-15	0	-15	0	multi-exon	FALSE	canonical	2	83	junction_4	22.1414490788887	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGACTTTATTTTTAATTG	-34	True	NA	30	True	ATTAAA	-40	NA	118346090	118449961	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_118346581_118378418_118378453_118387339_118387415_118392631_118393272_118394054_118394186_118395248_118395345_118396969_118397107_118398386_118398471_118404337_118404445_118406874_118407027_118409488_118409628_118410894_118410960_118432780_118432895_118436701_118436825_118441367_118441560_118442243_118442346_118442564_118442681_118443559_118443688_118444359_118444495_118448892
H1_mix_00089642	chrX	+	4029	20	FSM	ENSG00000131725.14	ENST00000371825.7	4029	20	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_17	35.2925250849214	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTCTCCAACACTTGTT	18	True	NA	6	True	ATTAAA	-16	NA	118346142	118449937	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_118346581_118378418_118378453_118387339_118387415_118392631_118393272_118394054_118394186_118395248_118395345_118396969_118397107_118398386_118398471_118404337_118404445_118406874_118407027_118409488_118409628_118410894_118410960_118432780_118432895_118436701_118436825_118441367_118441560_118442243_118442346_118442564_118442681_118443583_118443688_118444359_118444495_118448892
H1_mix_00089643	chrX	+	6930	54	NIC	ENSG00000147251.16	novel	6719	53	NA	NA	-194	-14	combination_of_known_junctions	TRUE	canonical	0	0	junction_30	8.41390972286325	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGTAAAACTTATTTGT	4	True	NA	-12	True	AATACA	-3	NA	118495620	118686125	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_118496074_118542724_118542842_118542925_118543016_118543510_118543594_118545322_118545393_118546020_118546117_118561382_118561518_118566004_118566183_118566573_118566654_118568078_118568163_118572322_118572464_118573805_118574019_118578524_118578648_118580096_118580180_118584734_118584858_118585040_118585118_118588136_118588322_118588412_118588479_118590209_118590303_118593213_118593338_118597430_118597553_118598029_118598117_118599138_118599229_118605237_118605357_118608071_118608142_118608230_118608357_118609277_118609350_118610271_118610419_118614691_118614776_118615599_118615712_118616201_118616241_118618549_118618729_118624538_118624656_118627503_118627580_118628162_118628273_118630378_118630491_118636345_118636413_118638079_118638128_118639434_118639578_118641189_118641306_118643456_118643595_118648944_118649128_118651963_118652078_118654601_118654818_118654903_118654962_118662685_118662793_118671022_118671146_118675935_118676050_118676590_118676738_118680481_118680693_118681057_118681249_118681693_118681795_118683078_118683218_118685687
H1_mix_00089644	chrX	+	6719	53	FSM	ENSG00000147251.16	ENST00000276202.9	6719	53	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_30	8.14876474466562	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAGAAGTGAAAGAAATAAT	-29	True	NA	10	True	AATAAA	-20	NA	118495814	118686147	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_118496074_118542724_118542842_118542925_118543016_118543510_118543594_118545322_118545393_118546020_118546117_118561382_118561518_118566004_118566183_118566573_118566654_118568078_118568163_118572322_118572464_118573805_118574019_118578524_118578648_118580096_118580180_118584734_118584858_118585040_118585118_118588136_118588322_118588412_118588479_118590209_118590303_118593213_118593338_118597430_118597553_118598029_118598117_118599138_118599229_118605237_118605357_118608071_118608142_118608230_118608357_118609277_118609350_118610271_118610419_118614691_118614776_118615599_118615712_118618549_118618729_118624538_118624656_118627503_118627580_118628162_118628273_118630378_118630491_118636345_118636413_118638079_118638128_118639434_118639578_118641189_118641306_118643456_118643595_118648944_118649128_118651963_118652078_118654601_118654818_118654903_118654962_118662685_118662793_118671022_118671146_118675935_118676050_118676590_118676738_118680481_118680693_118681057_118681249_118681693_118681795_118683078_118683218_118685687
H1_mix_00089645	chrX	+	4091	11	FSM	ENSG00000131724.11	ENST00000371666.8	3996	11	-95	0	-91	0	multi-exon	FALSE	canonical	3	95	junction_6	15.577226967596	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAATGTTTTCCTTTGGT	310	False	NA	9	True	AATAAA	-21	NA	118727510	118794533	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_118727727_118741016_118741157_118746953_118747093_118749657_118749779_118758054_118758243_118761137_118761290_118766529_118766578_118766843_118766977_118773878_118773976_118776426_118776512_118791761
H1_mix_00089646	chrX	+	2202	4	FSM	ENSG00000174460.4	ENST00000310164.3	2197	4	-11	6	-11	-6	multi-exon	FALSE	canonical	2	6	junction_3	0.471404520791032	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCATCTGCCTTAATGTG	26	False	NA	7	True	AATAAA	-9	NA	118823812	118826962	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_118824006_118824338_118824391_118824588_118824714_118825130
H1_mix_00089647	chrX	+	1879	3	FSM	ENSG00000101856.10	ENST00000217971.8	1879	3	0	0	0	0	multi-exon	FALSE	canonical	3	1344	junction_1	55	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTGGTGACTTATTTAA	2	True	NA	16	True	AATAAA	-18	NA	119236284	119244466	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_119236692_119240308_119240465_119243150
H1_mix_00089648	chrX	+	2526	5	FSM	ENSG00000077713.19	ENST00000217909.8	2507	5	-20	1	-20	-1	multi-exon	FALSE	canonical	3	36	junction_1	4.54835134966506	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGTTGGTCATTTAT	-38	True	NA	NA	False	ATTAAA	-20	NA	119399315	119454477	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_119399679_119406459_119406702_119410189_119410363_119452008_119452144_119452864
H1_mix_00089650	chrX	+	1230	4	FSM	ENSG00000005022.6	ENST00000317881.9	1307	4	0	77	0	-77	multi-exon	FALSE	canonical	3	5365	junction_3	274.699027219893	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCTGCAGTATATTTT	0	True	NA	15	True	AATAAA	-16	NA	119468443	119471319	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_119468627_119469660_119470148_119470372_119470514_119470900
H1_mix_00089651	chrX	+	1808	5	FSM	ENSG00000077721.16	ENST00000625938.2	1381	5	-105	-322	-95	0	multi-exon	FALSE	canonical	3	194	junction_3	142.536837343895	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCAAGGTATCTTTTTTT	NA	False	NA	17	True	AATAAA	-19	NA	119574440	119584423	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_119574756_119574900_119574982_119575374_119575401_119582587_119582677_119583126
H1_mix_00089652	chrX	+	1793	6	FSM	ENSG00000077721.16	ENST00000371558.7	1776	6	-17	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	201.087443665685	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCAAGGTATCTTTTTTT	9	False	NA	17	True	AATAAA	-19	NA	119574545	119584423	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_119574756_119574900_119574982_119575374_119575401_119581506_119581597_119582587_119582677_119583126
H1_mix_00089654	chrX	+	5547	3	FSM	ENSG00000077721.16	ENST00000371569.6	2643	3	-2904	0	2683	0	multi-exon	FALSE	canonical	0	0	junction_1	286	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATAGTCAAGGTATCTT	2540	False	NA	12	True	AATAAA	-14	NA	119577430	119584418	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_119581597_119582587_119582677_119583126
H1_mix_00089656	chrX	+	2492	1	FSM	ENSG00000187808.5	ENST00000343905.5	1615	1	-877	0	-877	0	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGCTGTCCTTTCAGTGT	NA	False	NA	13	True	ATTAAA	-27	NA	119757710	119760202	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_119757700_119760200
H1_mix_00089657	chrX	+	440	3	FSM	ENSG00000125356.7	ENST00000371437.5	421	3	-19	0	-19	0	multi-exon	FALSE	canonical	3	2679	junction_2	50	266	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTCTTTTTTTTAAAT	3	False	NA	6	True	AATAAA	-17	NA	119871812	119876662	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_119872014_119873303_119873394_119876513
H1_mix_00089658	chrX	+	594	3	FSM	ENSG00000186471.13	ENST00000371422.5	412	3	-91	-91	-91	91	multi-exon	FALSE	canonical	2	8	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGGTGGGATAGTCTTTG	121	False	NA	NA	False	AGTAAA	-26	NA	119896101	119903743	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_119896268_119903213_119903393_119903494
H1_mix_00089659	chrX	+	1547	3	FSM	ENSG00000258545.7	ENST00000687648.1	1536	3	-11	0	-11	0	multi-exon	FALSE	canonical	3	15	junction_1	6	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTCTCTGATTCCTTA	-6	True	NA	13	True	AATAAA	-18	NA	120140698	120146855	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_120140850_120143722_120143901_120145637
H1_mix_00089660	chrX	+	5211	2	FSM	ENSG00000177485.7	ENST00000326624.2	5211	2	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGAGTGCGTGTTTTAC	31	False	NA	15	True	AATAAA	-16	NA	120250751	120258398	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_120250978_120253413
H1_mix_00089662	chrX	+	806	6	FSM	ENSG00000232119.8	ENST00000371317.10	9577	6	0	8771	0	0	multi-exon	FALSE	canonical	3	342	junction_1	21.3597752797168	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTTAGCTTCAGAAATTA	-21	True	NA	32	True	AATAAA	-19	NA	120604100	120612388	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_120604248_120605406_120605560_120606078_120606177_120608224_120608359_120611010_120611079_120612182
H1_mix_00089665	chrX	+	932	4	FSM	ENSG00000125675.20	ENST00000611689.4	936	4	0	4	0	-4	multi-exon	FALSE	canonical	1	2	junction_3	13.4412301024373	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATCCTGTGTTCAGTTGT	6	True	NA	20	True	AATAAA	-20	NA	123184298	123204679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_123184645_123185831_123185991_123202635_123202783_123204399
H1_mix_00089666	chrX	+	567	1	FSM	ENSG00000179101.5	ENST00000416267.1	400	1	-114	-53	-114	53	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTCTTCCTGTCATTGGT	-1	True	NA	NA	False	NA	NA	NA	123514358	123514925	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_123514400_123514900
H1_mix_00089667	chrX	+	8568	7	FSM	ENSG00000101966.13	ENST00000371199.8	8558	7	-10	0	-10	0	multi-exon	FALSE	canonical	3	8	junction_1	3.02305952453618	12232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATACTACCTTGTATTT	24	True	NA	NA	False	AATAAA	-34	NA	123860042	123913972	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_123860294_123885630_123886540_123888618_123888719_123891237_123891317_123892730_123892774_123900492_123900694_123906987
H1_mix_00089668	chrX	+	2448	1	ISM	ENSG00000101966.13	ENST00000434753.7	8415	7	51713	4	-1235	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATACTACCTTGTATTT	NA	False	NA	NA	False	AATAAA	-34	NA	123911524	123913972	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_123911500_123914000
H1_mix_00089671	chrX	+	6507	33	NIC	ENSG00000101972.20	novel	5218	35	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_1	63.5949093874659	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATCCCTAATTGGATTA	NA	False	NA	NA	False	AATAAA	-22	NA	123960211	124102656	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_123960867_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568_124042646_124045163_124045369_124047353_124047506_124049004_124049079_124050185_124050310_124051120_124051220_124051314_124051395_124056127_124056236_124057865_124057978_124061223_124061342_124061770_124061875_124062901_124062995_124063115_124063206_124063847_124064052_124065875_124065947_124066174_124066263_124066355_124066437_124068563_124068657_124071148_124071324_124076331_124076472_124077956_124078059_124081379_124081529_124083420_124083550_124086546_124086771_124090574_124090765_124094017_124094145_124095371_124095450_124100573
H1_mix_00089674	chrX	+	6005	33	FSM	ENSG00000101972.20	ENST00000371157.7	5991	33	-19	5	-7	-5	multi-exon	FALSE	canonical	3	89	junction_1	59.3044893826555	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAACCAAATCCCTAATTG	-47	True	NA	NA	False	AATAAA	-17	NA	123961698	124102651	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_123961857_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568_124042646_124045163_124045369_124047353_124047506_124049004_124049079_124050185_124050310_124051120_124051220_124051314_124051395_124056127_124056236_124057865_124057978_124061223_124061342_124061770_124061875_124062901_124062995_124063115_124063206_124063847_124064052_124065875_124065947_124066174_124066263_124066355_124066437_124068563_124068657_124071148_124071324_124076331_124076472_124077956_124078059_124081379_124081529_124083420_124083550_124086546_124086771_124090574_124090765_124094017_124094145_124095371_124095450_124100573
H1_mix_00089675	chrX	+	6181	35	FSM	ENSG00000101972.20	ENST00000371145.8	6179	35	-7	5	-7	-5	multi-exon	FALSE	canonical	3	36	junction_1	83.4678988498471	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAACCAAATCCCTAATTG	-47	True	NA	NA	False	AATAAA	-17	NA	123961698	124102651	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_123961857_124021366_124021432_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568_124042646_124045163_124045369_124047353_124047506_124049004_124049079_124050185_124050310_124051120_124051220_124051314_124051395_124056127_124056236_124057865_124057978_124061223_124061342_124061770_124061875_124062901_124062995_124063115_124063206_124063847_124064052_124065875_124065947_124066174_124066263_124066355_124066437_124068563_124068657_124071148_124071324_124076331_124076472_124077956_124078059_124081379_124081529_124083420_124083550_124086546_124086771_124090574_124090765_124090853_124090965_124094017_124094145_124095371_124095450_124100573
H1_mix_00089677	chrX	+	6081	34	NIC	ENSG00000101972.20	novel	6179	35	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_1	72.14315938024	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATCCCTAATTGGATTA	-7	True	NA	NA	False	AATAAA	-22	NA	123961738	124102656	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_123961857_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568_124042646_124045163_124045369_124047353_124047506_124049004_124049079_124050185_124050310_124051120_124051220_124051314_124051395_124056127_124056236_124057865_124057978_124061223_124061342_124061770_124061875_124062901_124062995_124063115_124063206_124063847_124064052_124065875_124065947_124066174_124066263_124066355_124066437_124068563_124068657_124071148_124071324_124076331_124076472_124077956_124078059_124081379_124081529_124083420_124083550_124086546_124086771_124090574_124090765_124090853_124090965_124094017_124094145_124095371_124095450_124100573
H1_mix_00089678	chrX	+	5976	33	NIC	ENSG00000101972.20	novel	6143	38	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	64.3595551860794	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATCCCTAATTGGATTA	162	False	NA	NA	False	AATAAA	-22	NA	123961982	124102656	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_123962107_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568_124042646_124045163_124045369_124047353_124047506_124049004_124049079_124050185_124050310_124051120_124051220_124051314_124051395_124056127_124056236_124057865_124057978_124061223_124061342_124061770_124061875_124062901_124062995_124063115_124063206_124063847_124064052_124065875_124065947_124066174_124066263_124066355_124066437_124068563_124068657_124071148_124071324_124076331_124076472_124077956_124078059_124081379_124081529_124083420_124083550_124086546_124086771_124090574_124090765_124094017_124094145_124095371_124095450_124100573
H1_mix_00089680	chrX	+	5833	34	NIC	ENSG00000101972.20	novel	6143	38	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	75.3360271587402	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTATGTTTTCTCTTGT	9	True	NA	14	True	AATAAA	-16	NA	123962033	124102499	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_123962107_124021366_124021432_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568_124042646_124045163_124045369_124047353_124047506_124049004_124049079_124050185_124050310_124051120_124051220_124051314_124051395_124056127_124056236_124057865_124057978_124061223_124061342_124061770_124061875_124062901_124062995_124063115_124063206_124063847_124064052_124065875_124065947_124066174_124066263_124066355_124066437_124068563_124068657_124071148_124071324_124076331_124076472_124077956_124078059_124081379_124081529_124083420_124083550_124086546_124086771_124090574_124090765_124094017_124094145_124095371_124095450_124100573
H1_mix_00089683	chrX	+	5181	23	NNC	ENSG00000122126.18	novel	5138	23	NA	NA	-32	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	16.4548593641579	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGATTTTGGTGAGGAA	6	False	NA	15	True	AATAAA	-23	NA	129540226	129592560	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_129540479_129540747_129540824_129544957_129545038_129548562_129548602_129557324_129557436_129557860_129557951_129558632_129558754_129558839_129559002_129560549_129560652_129561178_129561294_129562383_129562501_129562598_129562787_129565771_129565884_129567253_129567364_129569263_129569400_129575139_129575251_129575896_129576063_129576316_129576553_129587001_129587119_129588178_129588264_129588885_129589014_129589844_129589957_129590145
H1_mix_00089684	chrX	+	2507	15	FSM	ENSG00000156697.13	ENST00000394422.8	2507	15	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_6	22.582275874532	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTGGAGTATATGTTG	-9	True	NA	9	True	AATAAA	-17	NA	129906163	129929752	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_129906237_129907366_129907443_129908059_129908131_129908669_129908735_129911007_129911151_129911765_129911922_129919174_129919295_129919394_129919490_129920456_129920581_129920674_129920753_129921193_129921588_129924794_129925196_129925918_129926113_129926239_129926340_129929335
H1_mix_00089686	chrX	+	7466	14	FSM	ENSG00000085185.16	ENST00000540052.6	7465	14	-54	53	-29	-53	multi-exon	FALSE	canonical	2	10	junction_6	5.32605519172731	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCATTTTAAGCAACTGG	0	True	NA	-44	True	NA	NA	NA	129982580	130058018	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_129982763_130005187_130005318_130012577_130012669_130012949_130016214_130020984_130021151_130022896_130022978_130024989_130025380_130028634_130028862_130034454_130034677_130037366_130037534_130039136_130039283_130050716_130050795_130051859_130052017_130055853
H1_mix_00089688	chrX	+	1264	2	FSM	ENSG00000134594.5	ENST00000257017.5	945	2	-319	0	-319	0	multi-exon	FALSE	canonical	3	31	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACATGGCTTTTTGTCTTG	5663	False	NA	4	True	AATAAA	-15	NA	130171642	130184870	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_130172321_130184284
H1_mix_00089689	chrX	+	1465	11	NIC	ENSG00000102078.16	novel	1615	11	NA	NA	-65	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_5	14.898322053171	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTACAGACCTCGGTTCT	NA	False	NA	-35	True	NA	NA	NA	130339822	130373314	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_130339977_130345181_130345276_130346543_130346692_130349250_130349346_130349823_130349868_130350645_130350732_130358639_130358736_130364627_130364753_130365540_130365677_130371563_130371645_130372908
H1_mix_00089690	chrX	+	1402	10	FSM	ENSG00000102078.16	ENST00000543953.5	1403	10	0	1	0	-1	multi-exon	FALSE	canonical	3	12	junction_4	21.6076118275225	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGCTTTGTCTTCATTT	-20	True	NA	11	True	ATTAAA	-20	NA	130339887	130373360	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_130339977_130345181_130345276_130346543_130346692_130349250_130349346_130350645_130350732_130358639_130358736_130364627_130364753_130365540_130365677_130371563_130371645_130372908
H1_mix_00089691	chrX	+	1281	9	NIC	ENSG00000102078.16	novel	1615	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_4	19.1294929363013	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTTGGCTTTGTCTTCA	12	True	NA	8	True	ATTAAA	-17	NA	130339919	130373357	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_130339977_130345181_130345276_130346543_130346692_130349250_130349346_130358639_130358736_130364627_130364753_130365540_130365677_130371563_130371645_130372908
H1_mix_00089693	chrX	+	743	4	FSM	ENSG00000134597.17	ENST00000469953.1	729	4	-14	0	0	0	multi-exon	FALSE	canonical	3	151	junction_3	11.6714276000077	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAAAGCATTAAGACTTAA	-5	True	NA	2	True	AAAAAG	-10	NA	130401986	130411524	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_130402371_130403801_130403854_130409256_130409387_130411347
H1_mix_00089694	chrX	+	1823	6	FSM	ENSG00000134597.17	ENST00000305536.11	1823	6	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_5	33.38622470421	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGGCCTTTTGTGTCTGG	-5	True	NA	14	True	CATAAA	-16	NA	130401986	130413656	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_130402038_130402254_130402371_130403801_130403854_130409256_130409387_130411347_130411526_130412360
H1_mix_00089695	chrX	+	2415	1	FSM	ENSG00000221930.6	ENST00000592932.1	1624	1	168	-959	-26	959	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATATTTTGATATTCAA	-3	True	NA	NA	False	AATAAA	-3	NA	130495132	130497547	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_130495100_130497500
H1_mix_00089696	chrX	+	3392	12	FSM	ENSG00000134602.16	ENST00000394334.7	3251	12	-141	0	-141	0	multi-exon	TRUE	canonical	3	415	junction_7	40.5067079436203	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAATGTTTGTTTTCCTTG	376	False	NA	17	True	AATAAA	-19	NA	132023160	132075943	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_132023408_132023507_132023660_132054630_132054862_132063432_132063490_132068214_132068324_132068411_132068570_132069477_132069664_132071068_132071218_132072267_132072362_132072812_132072876_132072956_132073094_132074134
H1_mix_00089697	chrX	+	3095	11	FSM	ENSG00000134602.16	ENST00000394335.6	3017	11	-78	0	-75	0	multi-exon	FALSE	canonical	3	26	junction_2	141.614264818203	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAATGTTTGTTTTCCTTG	0	True	NA	17	True	AATAAA	-19	NA	132023226	132075943	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_132023408_132023507_132023660_132063432_132063490_132068214_132068324_132068411_132068570_132069477_132069664_132071068_132071218_132072267_132072362_132072812_132072876_132072956_132073094_132074134
H1_mix_00089700	chrX	+	2134	2	FSM	ENSG00000203952.9	ENST00000370809.4	1299	2	187	-1022	187	593	multi-exon	FALSE	canonical	3	32	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGTTTTAAAGCCTAATA	9	False	NA	NA	False	NA	NA	NA	134237233	134246800	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_134237344_134244776
H1_mix_00089701	chrX	+	1700	3	FSM	ENSG00000203952.9	ENST00000517294.5	1790	3	90	0	90	0	multi-exon	FALSE	canonical	2	3	junction_1	12.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATGCCTGTGGGTCTTAT	NA	False	NA	14	True	AATAAA	-27	NA	134237136	134246207	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_134237344_134238778_134238841_134244776
H1_mix_00089702	chrX	+	1684	3	NNC	ENSG00000203952.9	novel	1790	3	NA	NA	148	13	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_2	3.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTATAACTGCCTGTTCA	3	True	NA	27	True	AATAAA	-40	NA	134237194	134246220	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_134237344_134238749_134238841_134244776
H1_mix_00089704	chrX	+	4475	11	FSM	ENSG00000156531.18	ENST00000625464.2	4434	11	-43	2	-19	0	multi-exon	FALSE	canonical	3	76	junction_5	99.0668965901325	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTTTGTCTTTTTTG	NA	False	NA	16	True	AATAAA	-16	NA	134373268	134428789	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_134373468_134377571_134377756_134378004_134378107_134393500_134393635_134393908_134393953_134413487_134413658_134413822_134413967_134415015_134415121_134417168_134417303_134425200_134425331_134425660
H1_mix_00089705	chrX	+	4802	10	FSM	ENSG00000156531.18	ENST00000332070.7	4759	10	-43	0	-19	0	multi-exon	FALSE	canonical	3	240	junction_5	52.0536285662544	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTTTGTCTTTTTTG	NA	False	NA	16	True	AATAAA	-16	NA	134373268	134428789	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_134373468_134377571_134377756_134378004_134378107_134393500_134393635_134393908_134393953_134413490_134413658_134413822_134413967_134415015_134415121_134417168_134417303_134425200
H1_mix_00089706	chrX	+	4454	11	FSM	ENSG00000156531.18	ENST00000370803.8	4430	11	-24	0	0	0	multi-exon	FALSE	canonical	3	217	junction_10	64.1629955659802	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTGTCTTTTTTGT	0	True	NA	17	True	AATAAA	-17	NA	134373287	134428790	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_134373468_134377571_134377756_134378004_134378107_134393500_134393635_134393908_134393953_134413490_134413658_134413822_134413967_134415015_134415121_134417168_134417303_134425200_134425331_134425660
H1_mix_00089707	chrX	+	1416	9	FSM	ENSG00000165704.15	ENST00000298556.8	1395	9	-21	0	-21	0	multi-exon	FALSE	canonical	3	312	junction_7	27.1750689971525	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTTTATGAATTCAATTT	-14	True	NA	23	True	AATAAA	-16	NA	134460143	134500668	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_134460339_134473358_134473466_134475180_134475365_134486464_134486531_134490187_134490206_134493507_134493591_134498389_134498437_134498607_134498685_134500029
H1_mix_00089709	chrX	+	802	7	NIC	ENSG00000156500.16	novel	2119	5	NA	NA	3	10199	combination_of_known_splicesites	FALSE	canonical	3	6	junction_6	17.0163320241336	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAACATGGAATATAGA	16	False	NA	6	True	ATTAAA	-23	NA	134796791	134833189	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_134796865_134804100_134804247_134807539_134807709_134814770_134814850_134829225_134829283_134831635_134831669_134832944
H1_mix_00089711	chrX	+	2079	3	ISM	ENSG00000156500.16	ENST00000646004.1	1520	6	36576	225	4572	0	3prime_fragment	FALSE	canonical	1	2	junction_2	12	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAATGATCCATGCTAGT	NA	False	NA	33	True	AGTAAA	-21	NA	134843744	134854610	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_134845249_134845346_134845402_134854090
H1_mix_00089712	chrX	+	1504	1	FSM	ENSG00000184785.6	ENST00000330288.6	1483	1	-21	0	-21	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTGCATTTAGAATGAA	5	False	NA	NA	False	ATTAAA	-21	NA	134990969	134992473	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_134991000_134992500
H1_mix_00089713	chrX	+	1192	1	FSM	ENSG00000134590.14	ENST00000257013.9	1192	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTCTCAATGAATATGGCA	-1	True	NA	NA	False	AATAAA	-24	NA	135032354	135033546	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_135032400_135033500
H1_mix_00089714	chrX	+	4752	5	NNC	ENSG00000173275.13	novel	4034	5	NA	NA	-44	318	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_2	13.2923850380584	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGTAGTTTAATGATAA	1099	False	NA	NA	False	AATAAA	-22	NA	135344751	135363731	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_135344836_135347018_135347473_135348753_135349315_135359891_135360006_135360192
H1_mix_00089715	chrX	+	2051	2	FSM	ENSG00000173275.13	ENST00000370761.7	2051	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACATGCATGATTCTCATA	-1	True	NA	NA	False	TTTAAA	-35	NA	135344795	135349029	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_135344836_135347018
H1_mix_00089716	chrX	+	4426	5	FSM	ENSG00000173275.13	ENST00000339249.5	4034	5	-40	-352	-40	352	multi-exon	FALSE	canonical	3	43	junction_2	7.95298686029343	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGATTTCTTCTCTTTATG	1103	False	NA	NA	False	GATAAA	-14	NA	135344755	135363765	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_135344836_135347018_135347473_135349109_135349315_135359891_135360006_135360192
H1_mix_00089717	chrX	+	5624	2	FSM	ENSG00000178947.9	ENST00000417443.3	5230	2	36	-430	36	430	multi-exon	FALSE	canonical	3	61	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTAGTTGTACTTCTGT	15	True	NA	NA	False	ATTAAA	-17	NA	135421979	135428505	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_135422731_135423632
H1_mix_00089718	chrX	+	3762	18	NIC	ENSG00000165359.16	novel	3904	18	NA	NA	40	30	intron_retention	FALSE	canonical	3	18	junction_15	11.3683224059339	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTGATTTGTTACTCC	-4	True	NA	46	True	GATAAA	-16	NA	135520699	135582540	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_135521104_135521240_135521319_135545422_135545573_135546379_135546470_135546701_135546886_135547136_135547266_135549641_135549806_135551993_135552147_135556167_135556301_135569336_135569432_135570435_135570547_135572814_135573034_135573938_135574063_135575083_135575227_135577192_135577296_135579787_135580163_135581049_135581144_135581527
H1_mix_00089719	chrX	+	6710	16	FSM	ENSG00000165359.16	ENST00000493637.6	6710	16	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_13	11.4833212385035	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAATGCTGGATAAATTTC	197	False	NA	15	True	AATAAA	-26	NA	135520992	135582509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_135521104_135521240_135521319_135545422_135545573_135546379_135546470_135546701_135546886_135547136_135547266_135549641_135549806_135551993_135552147_135556167_135556301_135569336_135573034_135573938_135574063_135575083_135575227_135577192_135577296_135579787_135580163_135581049_135581144_135581527
H1_mix_00089720	chrX	+	2274	5	FSM	ENSG00000198689.13	ENST00000675550.1	1888	5	-263	-123	20	123	multi-exon	FALSE	canonical	3	113	junction_3	15.833114033569	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTCCCATTATCAACATGA	8	True	NA	NA	False	NA	NA	NA	135985454	136000401	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_135985828_135994785_135994986_135998107_135998186_135998481_135998559_135998855
H1_mix_00089721	chrX	+	4712	16	FSM	ENSG00000198689.13	ENST00000370695.8	4711	16	2	-3	2	-3	multi-exon	FALSE	canonical	0	0	junction_7	34.4140798059296	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAACTTATGGGTTGGCAA	-10	True	NA	NA	False	AATAAA	-21	NA	135985436	136047264	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_135985828_135994785_135994986_135998107_135998186_135998481_135998559_135998855_135998969_136002107_136002214_136010441_136010584_136012948_136013055_136013348_136013438_136016644_136016759_136022585_136022698_136024329_136024484_136030131_136030163_136033413_136033494_136040075_136040182_136044451
H1_mix_00089722	chrX	+	4616	16	FSM	ENSG00000198689.13	ENST00000370698.7	4631	16	10	5	2	-3	multi-exon	FALSE	canonical	0	0	junction_7	42.6796855137846	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAACTTATGGGTTGGCAA	-10	True	NA	NA	False	AATAAA	-21	NA	135985436	136047264	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_135985828_135994785_135994890_135998107_135998186_135998481_135998559_135998855_135998969_136002107_136002214_136010441_136010584_136012948_136013055_136013348_136013438_136016644_136016759_136022585_136022698_136024329_136024484_136030131_136030163_136033413_136033494_136040075_136040182_136044451
H1_mix_00089723	chrX	+	4574	17	NIC	ENSG00000198689.13	novel	4684	18	NA	NA	10	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	43.2745143675813	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAACTTATGGGTTGGCAA	-2	True	NA	NA	False	AATAAA	-21	NA	135985444	136047264	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_135985473_135985602_135985828_135994785_135994986_135998107_135998186_135998481_135998559_135998855_135998969_136002107_136002214_136010441_136010584_136012948_136013055_136013348_136013438_136016644_136016759_136022585_136022698_136024329_136024484_136030131_136030163_136033413_136033494_136040075_136040182_136044451
H1_mix_00089724	chrX	+	2448	7	FSM	ENSG00000022267.19	ENST00000651929.2	2441	7	-7	0	-7	0	multi-exon	FALSE	canonical	3	135	junction_6	22.4276614920058	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTCTTTTCATTCTGC	8	True	NA	23	True	AATAAA	-21	NA	136147457	136211359	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_136147629_136169906_136169981_136206406_136206589_136207015_136207191_136207791_136207962_136208454_136208642_136209870
H1_mix_00089725	chrX	+	2568	8	FSM	ENSG00000022267.19	ENST00000394155.8	2568	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	74.2422950032321	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTCCTGTCTTTTCAT	-2	True	NA	18	True	AATAAA	-16	NA	136147532	136211354	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_136147629_136169906_136169981_136206406_136206589_136207015_136207191_136207791_136207962_136208454_136208642_136209242_136209443_136209870
H1_mix_00089727	chrX	+	2900	10	FSM	ENSG00000102241.12	ENST00000535601.5	3019	10	119	0	-23	0	multi-exon	TRUE	canonical	3	292	junction_1	161.590551001101	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTGGACTTGAGTTAAA	266	False	NA	38	True	AATAAA	-27	NA	136497197	136512342	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_136497440_136497623_136497871_136499597_136499779_136500157_136500206_136500663_136500819_136502777_136502942_136504363_136504464_136509090_136509181_136510081_136510220_136510807
H1_mix_00089728	chrX	+	2694	9	FSM	ENSG00000102241.12	ENST00000218364.5	2694	9	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_4	82.7673697781922	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGACTTGAGTTAAATTGC	-3	True	NA	42	True	AATAAA	-31	NA	136497591	136512346	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_136497871_136499597_136499779_136500157_136500206_136500663_136500819_136502777_136502942_136504363_136504464_136509090_136509181_136510081_136510220_136510807
H1_mix_00089729	chrX	+	651	1	FSM	ENSG00000225400.1	ENST00000427490.1	651	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTTTTCCATTGTGTT	NA	False	NA	NA	False	NA	NA	NA	136847383	136848034	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_136847400_136848000
H1_mix_00089730	chrX	+	4001	3	FSM	ENSG00000156925.12	ENST00000287538.10	4001	3	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_2	41.5	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTATTTGGTGCCTGA	-2	True	NA	-33	True	AATAAA	-31	NA	137566126	137572102	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_137567752_137568901_137569066_137569890
H1_mix_00089731	chrX	+	2343	3	FSM	ENSG00000156925.12	ENST00000370606.3	1968	3	-375	0	16	0	multi-exon	FALSE	canonical	3	115	junction_2	206	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGATTATTGTTTTA	-7	True	NA	13	True	AATAAA	-14	NA	137566142	137577691	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_137567752_137568901_137569066_137577121
H1_mix_00089733	chrX	+	1211	1	FSM	ENSG00000214653.4	ENST00000416838.1	1137	1	342	-416	342	416	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATCTTAAAACAGCCACAC	NA	False	NA	49	True	AAAAAG	-10	NA	140032685	140033896	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_140032700_140033900
H1_mix_00089734	chrX	+	1540	1	FSM	ENSG00000230707.3	ENST00000453380.3	1234	1	-300	-6	-300	6	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCTTATTTATTCTTAAA	NA	False	NA	10	True	AATAAA	-22	NA	140091377	140092917	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_140091400_140092900
H1_mix_00089735	chrX	+	1354	2	FSM	ENSG00000203930.13	ENST00000669839.1	1354	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTGGCCTGTAATGAAAA	NA	False	NA	NA	False	AAGAAA	-24	NA	140764497	140773230	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_140764699_140772077
H1_mix_00089736	chrX	+	8178	5	NNC	ENSG00000185985.11	novel	8421	5	NA	NA	55	295	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	6.29980158417708	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTATAAAAATATATATTCA	48	False	NA	NA	False	NA	NA	NA	145817883	145830151	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_145818027_145820473_145820537_145821830_145821885_145822004_145822154_145822382
H1_mix_00089737	chrX	+	9005	5	NNC	ENSG00000185985.11	novel	8421	5	NA	NA	18	-3	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	4.81534007106456	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAATGTCATATTTTGG	11	True	NA	NA	False	AATAGA	-32	NA	145817846	145829853	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_145818027_145820473_145820537_145820742_145821885_145822004_145822154_145822382
H1_mix_00089740	chrX	+	4462	17	FSM	ENSG00000102081.16	ENST00000370475.9	4441	17	-21	0	-21	0	multi-exon	FALSE	canonical	3	28	junction_11	70.5121609635529	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTCTGACAGATGTTTGC	11	False	NA	76	True	ATTAAA	-28	NA	147911897	147951125	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_147912231_147921932_147921986_147925539_147925634_147928321_147928394_147928658_147928808_147929947_147930042_147930127_147930245_147932424_147932596_147932684_147932764_147936503_147936614_147937465_147937601_147938098_147938162_147940575_147940663_147943130_147943327_147944868_147945052_147945533_147945617_147948682
H1_mix_00089741	chrX	+	4333	16	FSM	ENSG00000102081.16	ENST00000218200.12	4333	16	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_15	40.6369290178281	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGCAAAAAATTAGTCT	-5	True	NA	63	True	ATTAAA	-15	NA	147911950	147951112	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_147912231_147921932_147921986_147925539_147925634_147928321_147928394_147928658_147928808_147929947_147930042_147930127_147930245_147932424_147932596_147932684_147932764_147936503_147936614_147937465_147937601_147940575_147940663_147943130_147943327_147944868_147945052_147945533_147945617_147948682
H1_mix_00089742	chrX	+	4271	16	FSM	ENSG00000102081.16	ENST00000440235.6	4271	16	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_13	55.3808631207568	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTCTGACAGATGTTTGC	-5	True	NA	76	True	ATTAAA	-28	NA	147911950	147951125	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_147912231_147921932_147921986_147925539_147925634_147928321_147928394_147928658_147928808_147929947_147930042_147930127_147930245_147932424_147932596_147932684_147932764_147936503_147936614_147937465_147937601_147940575_147940663_147943130_147943327_147944943_147945052_147945533_147945617_147948682
H1_mix_00089743	chrX	+	1993	16	FSM	ENSG00000102081.16	ENST00000495717.6	2874	16	-97	978	20	30	multi-exon	FALSE	canonical	3	20	junction_15	59.10946530708	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTAATTTCTTGCACTTCT	27	False	NA	23	True	AATAAA	-14	NA	147911982	147948534	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_147912231_147921932_147921986_147925539_147925634_147928321_147928394_147928658_147928808_147929947_147930042_147930127_147930245_147932424_147932596_147932684_147932764_147936503_147936614_147937465_147937601_147940575_147940663_147943130_147943327_147944868_147945052_147945533_147945617_147948412
H1_mix_00089745	chrX	+	4181	16	FSM	ENSG00000102081.16	ENST00000687593.1	4159	16	-18	-4	0	0	multi-exon	FALSE	canonical	3	107	junction_15	42.2750780273937	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGCAAAAAATTAGTCT	8	False	NA	63	True	ATTAAA	-15	NA	147912051	147951112	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_147912231_147921932_147921986_147925539_147925634_147928321_147928394_147928658_147928808_147929947_147930042_147930127_147930245_147932424_147932596_147932684_147932764_147936503_147936614_147937465_147937601_147940575_147940663_147943130_147943327_147944868_147945052_147945533_147945617_147948733
H1_mix_00089748	chrX	+	1207	5	FSM	ENSG00000197620.11	ENST00000450602.6	1204	5	-3	0	-3	0	multi-exon	FALSE	canonical	3	24	junction_1	30.5122926047847	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTAGTGTTTGAGGCTT	7	True	NA	NA	False	AATAAA	-15	NA	149540626	149547309	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_149540800_149542018_149542067_149545367_149545501_149545601_149545884_149546738
H1_mix_00089749	chrX	+	2252	5	FSM	ENSG00000197620.11	ENST00000393985.8	2407	5	0	155	0	-155	multi-exon	FALSE	canonical	3	12	junction_2	37.1348892552543	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATATACAAGGTTAAAAAAA	-6	True	NA	NA	False	NA	NA	NA	149541011	149548176	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_149541344_149542018_149542086_149545367_149545501_149545601_149545884_149546738
H1_mix_00089750	chrX	+	1416	3	FSM	ENSG00000235254.3	ENST00000524311.1	546	3	0	-870	0	870	multi-exon	FALSE	canonical	3	60	junction_1	36	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACGGCAACACCAAGCAA	9368	False	NA	NA	False	NA	NA	NA	149768896	149772238	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_149769074_149769698_149769823_149771123
H1_mix_00089752	chrX	+	284	2	FSM	ENSG00000235703.7	ENST00000455777.1	284	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAAACCTATTGCATCG	35	False	NA	NA	False	NA	NA	NA	149960880	149962798	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_149960949_149962582
H1_mix_00089755	chrX	+	3440	15	FSM	ENSG00000171100.16	ENST00000370396.7	3412	15	-28	0	-2	0	multi-exon	FALSE	canonical	3	56	junction_9	11.7822505732746	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTTTCAGGGCTGTGA	5939	False	NA	11	True	AATAAA	-20	NA	150568592	150673143	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_150568663_150592604_150592678_150596497_150596571_150598591_150598687_150614588_150614700_150619037_150619140_150638942_150639027_150641268_150641419_150645682_150645872_150649715_150649902_150657820_150658028_150659663_150659757_150660370_150660485_150663432_150663610_150671427
H1_mix_00089756	chrX	+	4175	14	NIC	ENSG00000063601.17	novel	4536	16	NA	NA	-2	0	intron_retention	FALSE	canonical	2	9	junction_13	26.9654611433692	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCCTGGTCTTTTTTAAG	-14	True	NA	14	True	ATTAAA	-15	NA	150693371	150764924	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_150693677_150699194_150699301_150718624_150718701_150727214_150727310_150727683_150727792_150730108_150730211_150730524_150730609_150731469_150731620_150732541_150732731_150736594_150736781_150737241_150737449_150744360_150744454_150750729_150750844_150762564
H1_mix_00089757	chrX	+	4338	15	ISM	ENSG00000063601.17	ENST00000370390.7	2755	16	12	179	7	0	intron_retention	FALSE	canonical	3	89	junction_13	9.97650300681045	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCCTGGTCTTTTTTAAG	0	True	NA	14	True	ATTAAA	-15	NA	150693385	150764924	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_150693677_150699194_150699301_150718624_150718701_150727214_150727310_150727683_150727792_150730108_150730211_150730524_150730609_150731469_150731620_150732541_150732731_150736594_150736781_150737241_150737449_150744360_150744454_150750729_150750844_150755688_150755866_150762564
H1_mix_00089758	chrX	+	3507	5	FSM	ENSG00000029993.15	ENST00000325307.12	3507	5	0	0	0	0	multi-exon	FALSE	canonical	3	3223	junction_4	426.168027308478	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATCAGTGGGCTGTCTGC	13	True	NA	36	True	AATAAA	-26	NA	150983334	150990771	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_150983377_150985594_150985750_150986050_150986191_150987127_150987303_150987776
H1_mix_00089759	chrX	+	812	5	FSM	ENSG00000029993.15	ENST00000448905.6	812	5	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	1601.61346382328	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTGTGAATACTTAGAGT	41	False	NA	13	True	AATAAA	-18	NA	150983405	150987932	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_150983592_150985594_150985750_150986050_150986191_150987127_150987303_150987776
H1_mix_00089760	chrX	+	823	5	NNC	ENSG00000029993.15	novel	529	3	NA	NA	1023	0	at_least_one_novel_splicesite	FALSE	canonical	3	84	junction_1	1639.59924600495	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTGTGAATACTTAGAGT	36	False	NA	13	True	AATAAA	-18	NA	150984428	150987932	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_150984626_150985594_150985750_150986050_150986191_150987127_150987303_150987776
H1_mix_00089762	chrX	+	3156	2	Fusion	ENSG00000269993.1_ENSG00000102195.10	novel	2020	2	NA	NA	1334	0	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGTGGTTTGTGGATAA	1100	False	NA	9	True	ATTAAA	-22	NA	151177917	151182855	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chrX_+_151177989_151179770
H1_mix_00089763	chrX	+	4738	3	FSM	ENSG00000160131.14	ENST00000330374.7	4715	3	-23	0	-23	0	multi-exon	FALSE	canonical	3	655	junction_1	2	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTGTGTCCTGATTCA	-19	True	NA	18	True	ATTAAA	-20	NA	151397182	151409364	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_151397362_151403630_151403741_151404915
H1_mix_00089764	chrX	+	5762	4	FSM	ENSG00000130032.17	ENST00000370353.3	5977	4	210	5	210	-5	multi-exon	FALSE	canonical	1	1	junction_1	4.49691252107735	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAATCCTGTCGTCATCCA	112	False	NA	11	True	AATAAA	-18	NA	151698516	151705919	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_151698666_151698783_151698822_151699995_151700157_151700505
H1_mix_00089766	chrX	+	7233	8	ISM	ENSG00000268089.3	ENST00000598523.3	6468	9	-7	0	-7	0	intron_retention	FALSE	canonical	3	23	junction_2	6.53405521487387	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGTCATCGTGTTTCCTC	-15	True	NA	11	True	AATAAA	-24	NA	152637887	152657542	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_152638352_152640377_152640467_152645526_152645595_152646947_152647169_152649250_152649334_152649741_152649880_152650427_152650581_152651525
H1_mix_00089768	chrX	+	1673	9	FSM	ENSG00000147383.11	ENST00000440023.5	1630	9	-43	0	-43	0	multi-exon	FALSE	canonical	3	27	junction_1	120.596887915899	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTGTCTCTCTGTTTA	3177	False	NA	29	True	NA	NA	NA	152830923	152869363	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_152831118_152831633_152831701_152846281_152846433_152850264_152850424_152858769_152858917_152862595_152862725_152865818_152865962_152867570_152867674_152868783
H1_mix_00089770	chrX	+	1738	8	FSM	ENSG00000147383.11	ENST00000370274.8	1833	8	0	95	0	-95	multi-exon	FALSE	canonical	3	266	junction_6	22.7434673284978	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGAGCAAAAGCTGAAAGC	-1	True	NA	NA	False	NA	NA	NA	152831062	152869634	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_152831118_152846281_152846433_152850264_152850424_152858769_152858917_152862595_152862725_152865818_152865962_152867570_152867674_152868783
H1_mix_00089771	chrX	+	4419	23	NNC	ENSG00000147394.19	novel	4328	23	NA	NA	-16396	0	at_least_one_novel_splicesite	TRUE	canonical	3	27	junction_11	12.8784046288787	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTGTCAGTGTTAAAGT	4	True	NA	13	True	AATAAA	-13	NA	152898045	152973471	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_152898239_152914444_152914524_152914709_152914834_152915137_152915204_152917130_152917170_152917284_152917363_152918064_152918155_152918982_152919082_152920327_152920412_152920706_152920749_152922172_152922257_152928574_152928662_152931671_152931777_152932872_152932972_152938073_152938164_152945266_152945465_152959698_152959897_152963838_152963950_152965446_152965528_152967166_152967239_152969381_152969485_152970442_152970542_152971273
H1_mix_00089772	chrX	+	4298	22	NNC	ENSG00000147394.19	novel	4328	23	NA	NA	-16363	-1	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_11	13.7733516407409	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATGTGTCAGTGTTAAAG	7	True	NA	12	True	AATAAA	-12	NA	152898078	152973470	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_152898239_152914444_152914524_152914709_152914834_152915137_152915204_152917130_152917170_152917284_152917363_152918064_152918155_152918982_152919082_152920327_152920412_152920706_152920749_152922172_152922257_152931671_152931777_152932872_152932972_152938073_152938164_152945266_152945465_152959698_152959897_152963838_152963950_152965446_152965528_152967166_152967239_152969381_152969485_152970442_152970542_152971273
H1_mix_00089773	chrX	+	4305	23	FSM	ENSG00000147394.19	ENST00000370268.8	4305	23	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_11	16.6614936875667	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTGTCAGTGTTAAAGT	19	False	NA	13	True	AATAAA	-13	NA	152914452	152973471	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_152914524_152914709_152914834_152915137_152915204_152917130_152917170_152917284_152917363_152918064_152918155_152918982_152919082_152920327_152920412_152920709_152920749_152922172_152922257_152922719_152922810_152928574_152928662_152931671_152931777_152932872_152932972_152938073_152938164_152945266_152945465_152959698_152959897_152963838_152963950_152965446_152965528_152967166_152967239_152969381_152969485_152970442_152970542_152971273
H1_mix_00089774	chrX	+	3732	2	FSM	ENSG00000183837.10	ENST00000593810.3	3682	2	-50	0	11	0	multi-exon	FALSE	canonical	3	21	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGGCCTCGCCTCTGCTGT	NA	False	NA	18	True	AATAAA	-18	NA	153056419	153060462	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_153056639_153056949
H1_mix_00089775	chrX	+	2353	2	FSM	ENSG00000235961.6	ENST00000421798.5	2238	2	-115	0	-115	0	multi-exon	FALSE	canonical	3	35	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGGCCTCGCCTCTGCTGT	NA	False	NA	17	True	AATAAA	-18	NA	153072338	153075019	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_153072607_153072934
H1_mix_00089776	chrX	+	6451	4	FSM	ENSG00000063587.15	ENST00000650114.2	6420	4	-31	0	-25	0	multi-exon	FALSE	canonical	3	14	junction_2	4.18993502999218	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTTCCTTGACGTCTT	-8	True	NA	14	True	AATAAA	-17	NA	153334121	153352926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_153334286_153336633_153336711_153345519_153345622_153346818
H1_mix_00089777	chrX	+	2349	8	FSM	ENSG00000182492.16	ENST00000331595.9	2353	8	4	0	1	0	multi-exon	TRUE	canonical	3	7	junction_1	2.07019667802706	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCGTGCGCTGCTCCTGT	4	True	NA	12	True	ATTAAA	-19	NA	153494983	153509546	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_153495114_153504620_153504870_153505237_153505351_153505862_153506077_153506528_153506640_153506829_153506924_153507046_153507186_153508247
H1_mix_00089778	chrX	+	585	1	FSM	ENSG00000260081.2	ENST00000562749.1	554	1	-48	17	-23	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	194	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGCTGAATATCGAACTC	NA	False	NA	1	True	AATAAA	-13	NA	153599291	153599876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_153599300_153599900
H1_mix_00089780	chrX	+	2450	4	FSM	ENSG00000130829.18	ENST00000342782.4	2434	4	-16	0	-16	0	multi-exon	FALSE	canonical	2	5	junction_1	3.09120616516523	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGAGAGAGAAGCTACCTC	-1	True	NA	12	True	AATAAA	-21	NA	153647186	153651326	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_153647426_153647918_153648327_153649231_153649688_153649979
H1_mix_00089781	chrX	+	3936	13	FSM	ENSG00000130821.17	ENST00000253122.10	3931	13	-5	0	-5	0	multi-exon	FALSE	canonical	3	289	junction_6	40.6764844706237	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGCTCCTGCTTCCGCCT	-7	True	NA	NA	False	AATAAA	-19	NA	153687920	153696588	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_153688837_153690374_153690507_153691303_153691554_153691974_153692108_153693040_153693176_153693262_153693367_153693461_153693587_153693904_153694018_153694129_153694268_153694343_153694447_153694532_153694634_153694718_153694890_153695073
H1_mix_00089783	chrX	+	3841	10	FSM	ENSG00000101986.12	ENST00000218104.6	3669	10	-172	0	-172	0	multi-exon	TRUE	canonical	3	17	junction_7	3.09120616516523	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGCCTCAGAGCCTGGT	323	False	NA	16	True	AGTAAA	-29	NA	153724683	153744755	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_153726167_153729231_153729413_153736111_153736255_153736344_153736514_153737156_153737252_153740091_153740238_153740573_153740720_153742986_153743072_153743220_153743347_153743488
H1_mix_00089784	chrX	+	1016	2	FSM	ENSG00000101986.12	ENST00000370129.4	1016	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGTTGTTTTTGTTTGT	580	False	NA	3	True	ATTAAA	-17	NA	153725816	153729897	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_153726167_153729231
H1_mix_00089788	chrX	+	761	7	FSM	ENSG00000180879.14	ENST00000370087.5	745	7	-16	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	713.743281735262	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGGGCTGCTGGCTTGC	0	True	NA	46	True	AATAAA	-27	NA	153794174	153798498	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_153794335_153794673_153794755_153796433_153796553_153797457_153797533_153797724_153797815_153798070_153798137_153798328
H1_mix_00089789	chrX	+	1671	7	FSM	ENSG00000180879.14	ENST00000320857.7	1671	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	707.116307422069	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGGGCTGCTGGCTTGC	NA	False	NA	46	True	AATAAA	-27	NA	153793515	153798498	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_153794586_153794673_153794755_153796433_153796553_153797457_153797533_153797724_153797815_153798070_153798137_153798328
H1_mix_00089790	chrX	+	617	6	FSM	ENSG00000180879.14	ENST00000370086.8	608	6	-9	0	0	0	multi-exon	FALSE	canonical	3	1774	junction_5	120.741707789811	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGGCTGCTGGCTTGCG	2	True	NA	47	True	AATAAA	-28	NA	153794658	153798499	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_153794755_153796433_153796553_153797457_153797533_153797724_153797815_153798070_153798137_153798328
H1_mix_00089791	chrX	+	526	5	FSM	ENSG00000180879.14	ENST00000370085.3	526	5	0	0	0	0	multi-exon	FALSE	canonical	2	31	junction_2	773.209989265529	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGGGCTGCTGGCTTGC	17	True	NA	46	True	AATAAA	-27	NA	153794673	153798498	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_153794755_153796433_153796553_153797724_153797815_153798070_153798137_153798328
H1_mix_00089792	chrX	+	701	5	FSM	ENSG00000180879.14	ENST00000485612.5	701	5	0	0	0	0	multi-exon	FALSE	canonical	3	1774	junction_4	126.52149026944	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTGGGGCTGCTGGCTTG	1595	False	NA	45	True	AATAAA	-26	NA	153796251	153798497	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_153796553_153797457_153797533_153797724_153797815_153798070_153798137_153798328
H1_mix_00089793	chrX	+	256	1	FSM	ENSG00000184844.6	ENST00000402289.3	315	1	-26	85	-26	-85	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAACAAAAATGATCTTTG	44	False	NA	NA	False	NA	NA	NA	153841224	153841480	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_153841200_153841500
H1_mix_00089794	chrX	+	1452	2	FSM	ENSG00000177854.8	ENST00000369982.5	1452	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGATCGTCTGGAGTATCTT	12	True	NA	8	True	NA	NA	NA	153972753	153983194	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_153972861_153981849
H1_mix_00089796	chrX	+	1303	6	FSM	ENSG00000102119.12	ENST00000369842.9	1281	6	-22	0	0	0	multi-exon	FALSE	canonical	3	379	junction_2	34.6814071225491	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTTGGCTCTTCCTGGAG	4	True	NA	31	True	AATAAA	-19	NA	154379272	154381523	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154379567_154379689_154379795_154379941_154380020_154380233_154380368_154380752_154380803_154380881
H1_mix_00089797	chrX	+	789	3	FSM	ENSG00000102119.12	ENST00000494443.5	765	3	-24	0	0	0	multi-exon	FALSE	canonical	3	379	junction_2	48.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGGGCCTCCGGGGAG	22	True	NA	NA	False	GATAAA	-29	NA	154379403	154380462	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154379567_154379689_154379795_154379941
H1_mix_00089799	chrX	+	1305	5	FSM	ENSG00000102119.12	ENST00000683576.1	1281	5	-24	0	0	0	multi-exon	FALSE	canonical	3	379	junction_2	34.9606922128267	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTTGGCTCTTCCTGGAG	46	False	NA	31	True	AATAAA	-19	NA	154379484	154381523	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154379567_154379689_154379795_154379941_154380368_154380752_154380803_154380881
H1_mix_00089800	chrX	+	1352	6	FSM	ENSG00000102119.12	ENST00000684633.1	1114	6	-289	51	-53	0	multi-exon	FALSE	canonical	3	61	junction_1	147.603522993186	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTTGGCTCTTCCTGGAG	-49	True	NA	31	True	AATAAA	-19	NA	154379219	154381523	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154379563_154379689_154379795_154379941_154380020_154380233_154380368_154380752_154380803_154380881
H1_mix_00089802	chrX	+	657	7	FSM	ENSG00000147403.18	ENST00000436473.5	657	7	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	6847.25357959915	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCGTGGCCCTCTGGACA	32	False	NA	-73	True	NA	NA	NA	154398366	154400811	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154398399_154398496_154398543_154399337_154399397_154399486_154399595_154399802_154399942_154400463_154400627_154400701
H1_mix_00089803	chrX	+	851	5	FSM	ENSG00000147403.18	ENST00000485196.5	839	5	-12	0	0	0	multi-exon	FALSE	canonical	3	17529	junction_4	543.22140974008	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCCTCTGGACAAGTGGC	32	False	NA	-67	True	NA	NA	NA	154398366	154400817	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154398543_154399337_154399595_154399802_154399942_154400463_154400627_154400701
H1_mix_00089804	chrX	+	1529	3	FSM	ENSG00000147403.18	ENST00000489200.5	1519	3	-10	0	0	0	multi-exon	FALSE	canonical	3	18667	junction_1	162.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTTCCTGTCCACCTAT	32	False	NA	14	True	AATAAA	-2	NA	154398366	154400898	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154398543_154399337_154399595_154399802
H1_mix_00089805	chrX	+	1752	2	FSM	ENSG00000147403.18	ENST00000482732.1	1731	2	-21	0	0	0	multi-exon	FALSE	canonical	3	18667	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGTCTTTGTATCTACA	32	False	NA	29	True	AATAAA	-17	NA	154398366	154400913	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154398543_154399337
H1_mix_00089806	chrX	+	1379	5	FSM	ENSG00000147403.18	ENST00000491035.5	1369	5	-10	0	0	0	multi-exon	FALSE	canonical	3	17529	junction_4	545.379225860318	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGTCTTTGTATCTACA	32	False	NA	29	True	AATAAA	-17	NA	154398366	154400913	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154398543_154399337_154399397_154399486_154399595_154399802_154400627_154400701
H1_mix_00089807	chrX	+	596	6	FSM	ENSG00000147403.18	ENST00000458500.5	585	6	-11	0	0	0	multi-exon	FALSE	canonical	3	394	junction_5	7219.81210281819	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTGTATCTACATTCT	32	False	NA	33	True	AATAAA	-21	NA	154398366	154400917	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154398395_154398496_154398543_154399337_154399397_154399486_154399595_154399802_154399942_154400701
H1_mix_00089808	chrX	+	2174	7	FSM	ENSG00000147403.18	ENST00000369817.7	2164	7	-10	0	0	0	multi-exon	FALSE	canonical	3	10869	junction_1	2848.82475280987	6322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGCTGCACAAGTGTCC	32	False	NA	NA	False	AATAAA	-16	NA	154398366	154402332	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154398395_154398496_154398543_154399337_154399397_154399486_154399595_154399802_154399942_154400463_154400627_154400701
H1_mix_00089809	chrX	+	2283	6	FSM	ENSG00000147403.18	ENST00000344746.8	2278	6	-5	0	0	0	multi-exon	FALSE	canonical	3	17529	junction_5	487.896464426624	1367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACAAGTGTCCTATCTCA	32	False	NA	NA	False	AATAAA	-23	NA	154398366	154402339	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154398543_154399337_154399397_154399486_154399595_154399802_154399942_154400463_154400627_154400701
H1_mix_00089810	chrX	+	802	5	FSM	ENSG00000147403.18	ENST00000467168.5	802	5	0	0	0	0	multi-exon	FALSE	canonical	3	18400	junction_4	223.408118697598	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGTCTTTGTATCTACA	10	False	NA	29	True	AATAAA	-17	NA	154398496	154400913	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154398543_154399337_154399397_154399486_154399595_154399802_154399942_154400463
H1_mix_00089812	chrX	+	1921	11	FSM	ENSG00000102125.16	ENST00000601016.6	1906	11	-15	0	0	0	multi-exon	FALSE	canonical	3	54	junction_7	38.1928003686559	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTGGCCTCTCTGTAG	-40	True	NA	24	True	CATAAA	-26	NA	154411523	154421726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154411953_154412085_154412215_154413206_154413253_154413481_154413568_154414100_154414191_154419542_154419624_154419704_154419747_154420031_154420095_154420211_154420265_154420657_154420736_154420902
H1_mix_00089813	chrX	+	1654	10	FSM	ENSG00000102125.16	ENST00000475699.6	1632	10	-22	0	7	0	multi-exon	FALSE	canonical	3	12	junction_1	46.0694590995857	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTCAGGTGGGCCGCAG	-33	True	NA	NA	False	NA	NA	NA	154411530	154421502	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154412007_154412085_154412215_154413206_154413253_154413481_154413568_154419542_154419624_154419704_154419747_154420031_154420095_154420211_154420265_154420657_154420736_154420902
H1_mix_00089818	chrX	+	2054	10	FSM	ENSG00000071553.18	ENST00000369762.7	2054	10	0	0	0	0	multi-exon	FALSE	canonical	2	430	junction_7	94.7652069297822	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGCCTCTTGTCGCTCA	-2	True	NA	16	True	AATAAA	-21	NA	154428676	154436516	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154428854_154429047_154429175_154431829_154431905_154432265_154432460_154432930_154432972_154433634_154433721_154434207_154434447_154435138_154435187_154435273_154435506_154435681
H1_mix_00089819	chrX	+	2240	11	FSM	ENSG00000203879.12	ENST00000447750.7	2240	11	0	0	0	0	multi-exon	FALSE	canonical	3	776	junction_5	92.9908059971522	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGATCTTGATGGTTA	-6	True	NA	23	True	AATAAA	-17	NA	154437153	154443467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154437300_154438522_154438631_154438764_154438865_154439005_154439141_154439940_154440140_154440374_154440507_154441095_154441196_154441622_154441795_154442110_154442256_154442373_154442429_154442519
H1_mix_00089820	chrX	+	1014	5	FSM	ENSG00000203879.12	ENST00000481304.5	1014	5	0	0	0	0	multi-exon	FALSE	canonical	3	889	junction_4	68.7259048685428	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAGGTGAGGACATGGGT	1	True	NA	NA	False	NA	NA	NA	154437188	154440500	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154437300_154438522_154438631_154438764_154438865_154439005_154439141_154439940
H1_mix_00089822	chrX	+	2417	4	FSM	ENSG00000203879.12	ENST00000468483.5	2417	4	0	0	0	0	multi-exon	FALSE	canonical	3	975	junction_3	36.3409777890836	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCTGGATCTTGATGGT	47	False	NA	21	True	AATAAA	-15	NA	154440523	154443465	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154441795_154442110_154442256_154442373_154442429_154442519
H1_mix_00089824	chrX	+	1356	13	FSM	ENSG00000071859.15	ENST00000393600.8	1337	13	-19	0	-19	0	multi-exon	FALSE	canonical	3	322	junction_5	49.5991571388959	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTCGGACCAAATTC	-17	True	NA	54	True	NA	NA	NA	154444121	154450654	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154444347_154445632_154445718_154445811_154445912_154446414_154446561_154448483_154448561_154448689_154448757_154448892_154448955_154449220_154449298_154449680_154449736_154449882_154449932_154450028_154450100_154450208_154450320_154450423
H1_mix_00089825	chrX	+	1484	12	FSM	ENSG00000071859.15	ENST00000464419.5	1470	12	-14	0	0	0	multi-exon	FALSE	canonical	3	322	junction_5	51.8038257625473	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTCGGACCAAATTC	2	True	NA	54	True	NA	NA	NA	154444140	154450654	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154444347_154445632_154445718_154445811_154445912_154446414_154446561_154448483_154448561_154448689_154448757_154448892_154448955_154449220_154449298_154449680_154449932_154450028_154450100_154450208_154450320_154450423
H1_mix_00089826	chrX	+	1240	11	FSM	ENSG00000071859.15	ENST00000158526.9	1240	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	119.878646972678	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGCGTAGGGGGCCGTG	289	False	NA	NA	False	NA	NA	NA	154444458	154450099	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154444910_154445632_154445718_154445811_154445912_154446414_154446561_154448483_154448561_154448689_154448757_154448892_154448955_154449220_154449298_154449680_154449736_154449882_154449932_154450028
H1_mix_00089828	chrX	+	6910	33	FSM	ENSG00000130827.6	ENST00000369682.4	10885	33	18	3957	15	1126	multi-exon	FALSE	canonical	3	16	junction_6	11.9947905358952	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATAGATTCTCCTCCCTT	17	False	NA	NA	False	NA	NA	NA	154458298	154473822	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154458429_154460156_154460778_154461098_154461639_154462127_154462311_154463390_154463520_154463589_154463691_154463950_154464075_154464156_154464314_154464401_154464502_154464753_154464869_154465017_154465219_154465423_154465521_154465656_154465848_154465934_154466081_154466149_154466271_154466375_154466513_154466622_154466794_154467056_154467151_154467231_154467472_154467544_154467689_154467766_154468002_154468081_154468225_154468302_154468560_154468662_154468730_154468822_154468970_154469055_154469216_154469378_154469483_154469687_154469785_154469976_154470168_154470441_154470612_154471104_154471318_154471487_154471639_154472589
H1_mix_00089831	chrX	+	1970	10	FSM	ENSG00000269335.7	ENST00000617207.4	1949	10	-21	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	44.6592033565809	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGCATTAGTCGTGC	-8	True	NA	NA	False	AGTAAA	-3	NA	154547619	154565033	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154547746_154551987_154552190_154556164_154556377_154558534_154558651_154560406_154560560_154561687_154561785_154562809_154562954_154563558_154563702_154563958_154564021_154564318
H1_mix_00089832	chrX	+	1973	10	FSM	ENSG00000269335.7	ENST00000594239.6	1973	10	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_4	16.0930933732762	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGCATTAGTCGTGC	-8	True	NA	NA	False	AGTAAA	-3	NA	154547619	154565033	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154547746_154551987_154552190_154556164_154556377_154558531_154558651_154560406_154560560_154561687_154561785_154562809_154562954_154563558_154563702_154563958_154564021_154564318
H1_mix_00089833	chrX	+	3130	14	FSM	ENSG00000130826.18	ENST00000620277.4	3079	14	-51	0	-51	0	multi-exon	FALSE	canonical	3	944	junction_6	67.3630102350615	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTTTATGTTTGTTTTC	NA	False	NA	24	True	ATTAAA	-35	NA	154762690	154777688	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154762982_154764898_154764967_154765443_154765531_154765906_154765999_154766215_154766401_154766996_154767062_154767255_154767383_154768301_154768433_154769166_154769311_154770758_154770880_154773130_154773250_154774601_154775274_154776186_154776325_154776798
H1_mix_00089834	chrX	+	2481	15	FSM	ENSG00000130826.18	ENST00000369550.10	2469	15	-12	0	0	0	multi-exon	FALSE	canonical	3	944	junction_6	67.3960651064788	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTTATGTTTGTTTTCT	-2	True	NA	25	True	ATTAAA	-36	NA	154762851	154777689	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154762982_154764898_154764967_154765443_154765531_154765906_154765999_154766215_154766401_154766996_154767062_154767255_154767383_154768301_154768433_154769166_154769311_154770758_154770880_154773130_154773250_154774601_154774706_154775194_154775274_154776186_154776325_154776798
H1_mix_00089836	chrX	+	1707	1	FSM	ENSG00000288722.1	ENST00000610495.2	1707	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGTTTTGGTGTCCGT	-2	True	NA	NA	False	GATAAA	-20	NA	154886354	154888061	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154886400_154888100
H1_mix_00089837	chrX	+	6900	5	FSM	ENSG00000165775.18	ENST00000369498.8	6297	5	0	-603	0	603	multi-exon	FALSE	canonical	3	372	junction_1	13.5346776836392	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCTGCCTACCTGACTT	1	True	NA	NA	False	TATAAA	-30	NA	155026843	155060907	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_155027072_155033402_155033554_155046508_155046585_155051669_155051802_155054594
H1_mix_00089838	chrX	+	2856	11	FSM	ENSG00000185515.16	ENST00000330045.12	2769	11	-92	5	-4	0	multi-exon	FALSE	canonical	2	189	junction_4	49.3060848171907	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATATTATTGTCAATGT	-13	True	NA	8	True	AATAAA	-21	NA	155071415	155123072	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_155071651_155072326_155072344_155073376_155073432_155077169_155077290_155078615_155078704_155089262_155089352_155090783_155090840_155116056_155116189_155116710_155116755_155119998_155120169_155121222
H1_mix_00089839	chrX	+	3577	11	FSM	ENSG00000185515.16	ENST00000340647.8	1101	11	15	-2491	15	732	multi-exon	FALSE	canonical	2	32	junction_2	84.1606202448627	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTCTTCTCTGGCTATC	6	True	NA	NA	False	NA	NA	NA	155071434	155123809	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_155071651_155072326_155072344_155073373_155073432_155077169_155077290_155078615_155078704_155089262_155089352_155090783_155090840_155116056_155116189_155116710_155116755_155119998_155120169_155121222
H1_mix_00089841	chrX	+	2850	12	FSM	ENSG00000185515.16	ENST00000369462.5	2846	12	-4	0	0	0	multi-exon	FALSE	canonical	2	39	junction_7	98.0178765951977	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATTATTGTCAATGTCT	-7	True	NA	10	True	AATAAA	-23	NA	155071498	155123074	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_155071651_155072326_155072344_155073376_155073432_155077169_155077290_155078615_155078704_155089262_155089352_155090783_155090840_155099314_155099390_155116056_155116189_155116710_155116755_155119998_155120169_155121222
H1_mix_00089842	chrX	+	3433	10	NIC	ENSG00000185515.16	novel	2846	12	NA	NA	2	0	intron_retention	FALSE	canonical	2	32	junction_1	87.0054631461953	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATTATTGTCAATGTCT	14	True	NA	10	True	AATAAA	-23	NA	155071519	155123074	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_155072344_155073373_155073432_155077169_155077290_155078615_155078704_155089262_155089352_155090783_155090840_155116056_155116189_155116710_155116755_155119998_155120169_155121222
H1_mix_00089844	chrX	+	1616	6	FSM	ENSG00000155959.12	ENST00000286428.7	1616	6	0	0	0	0	multi-exon	FALSE	canonical	3	628	junction_3	42.0970307741532	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTGTCTTACTATGTTT	-2	True	NA	42	True	ATTAAA	-43	NA	155216459	155239841	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_155216576_155220182_155220308_155227234_155227302_155228383_155228483_155236228_155236368_155238771
H1_mix_00089845	chrX	+	429	2	FSM	ENSG00000230578.3	ENST00000453508.1	426	2	-3	0	-3	0	multi-exon	FALSE	canonical	1	2	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGATTGTCTCCTTATC	NA	False	NA	NA	False	NA	NA	NA	155348754	155349799	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_155348966_155349581
H1_mix_00089846	chrX	+	1719	1	FSM	ENSG00000288709.1	ENST00000369505.5	1707	1	-14	2	-14	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGTGGTTTTGGTGTCC	1376	False	NA	NA	False	GATAAA	-18	NA	155382080	155383799	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_155382100_155383800
H1_mix_00089847	chrX	+	9160	2	FSM	ENSG00000168939.12	ENST00000302805.7	9019	2	-52	-89	-52	89	multi-exon	FALSE	canonical	3	14	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAGTTATTTTTAAATAC	8	False	NA	NA	False	NA	NA	NA	155767759	155782548	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_155768137_155773765
H1_mix_00089848	chrX	+	2582	7	FSM	ENSG00000124333.16	ENST00000488344.6	696	7	-61	-1825	-46	0	multi-exon	FALSE	canonical	3	13	junction_2	81.2412388438833	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTGTTTTAGAAGTTC	NA	False	NA	NA	False	AATAAA	-21	NA	155881298	155943769	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_155881449_155889457_155889613_155898111_155898250_155900496_155900588_155919812_155919881_155939700_155939794_155941882
H1_mix_00089849	chrX	+	2594	8	FSM	ENSG00000124333.16	ENST00000286448.12	2594	8	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_2	19.5281063796649	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTGTTTTAGAAGTTC	-1	True	NA	NA	False	AATAAA	-21	NA	155881344	155943769	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_155881449_155889457_155889613_155895622_155895681_155898111_155898250_155900496_155900588_155919812_155919881_155939700_155939794_155941882
H1_mix_00089850	chrX	+	804	4	FSM	ENSG00000182484.15	ENST00000496011.6	828	4	24	0	24	0	multi-exon	FALSE	canonical	2	4	junction_3	99.2818658612382	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCAGGTGAGCTGGGTTCT	NA	False	NA	NA	False	NA	NA	NA	156021468	156023207	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_156021793_156021998_156022146_156022322_156022460_156023011
H1_mix_00089852	chrX	+	1429	8	ISM	ENSG00000182484.15	ENST00000359512.8	1437	10	1038	-292	0	0	3prime_fragment	FALSE	canonical	3	52	junction_2	67.0178166990095	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACAGTGTGCTTTTAATA	NA	False	NA	NA	False	AATAAA	-15	NA	156021998	156025666	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_156022146_156022322_156022460_156022698_156022835_156023011_156023214_156023301_156023461_156024119_156024273_156025031_156025101_156025240
H1_mix_00089853	chrX	+	1641	2	FSM	ENSG00000182484.15	ENST00000496301.6	1641	2	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACAGTGTGCTTTTAATA	NA	False	NA	NA	False	AATAAA	-15	NA	156023366	156025666	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_156023461_156024119
H1_mix_00089855	chrX	-	2016	4	FSM	ENSG00000178605.13	ENST00000485332.7	2016	4	0	0	0	0	multi-exon	TRUE	canonical	3	356	junction_3	14.8847423745107	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGACGGGCACGGTGGC	6360	False	NA	NA	False	ACTAAA	-22	NA	312463	304528	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_305198_307359_307513_307731_307881_311418
H1_mix_00089856	chrX	-	1907	10	FSM	ENSG00000178605.13	ENST00000326153.9	1907	10	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_7	32.2765824984272	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCATTTCCAGTTCCTCC	4	True	NA	-5	True	ATTAAA	-22	NA	318819	304749	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_305198_307359_307513_307731_307881_311418_311628_312765_312925_314149_314218_314889_315021_315228_315300_316913_317052_318438
H1_mix_00089857	chrX	-	2378	13	FSM	ENSG00000167393.18	ENST00000390665.9	2378	13	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_12	45.9428237655845	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTCACGGGCTCGGC	27	True	NA	NA	False	NA	NA	NA	386907	333932	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_334518_338603_338711_338777_338897_340764_340941_341306_341397_341882_341932_345515_345673_346173_346261_346700_346776_347233_347337_347589_347694_361404_361591_386367
H1_mix_00089858	chrX	-	5802	8	FSM	ENSG00000167393.18	ENST00000477110.6	5802	8	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_6	44.5544839585908	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCGTGTTGATTGCCGC	NA	False	NA	-12	True	GATAAA	-16	NA	347324	334238	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_338711_338777_338897_340764_340941_341306_341932_345515_345673_346173_346261_346700_346776_347233
H1_mix_00089859	chrX	-	2034	13	NIC	ENSG00000167393.18	novel	2378	13	NA	NA	10	-1	combination_of_known_junctions	FALSE	canonical	3	100	junction_12	99.751740447083	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAGCGTGTTGATTGCCG	444	False	NA	-13	True	GATAAA	-15	NA	374034	334239	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_334518_338603_338711_338777_338897_340764_340941_341306_341397_341882_341932_345515_345673_346173_346261_346700_346776_347233_347337_347589_347694_361404_361591_373531
H1_mix_00089860	chrX	-	2628	5	NNC	ENSG00000169100.14	novel	1451	4	NA	NA	0	3482	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	2040.98432135085	1066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTTTATCATGAAATAAAC	-3	True	NA	-47	True	NA	NA	NA	1392113	1382669	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_1382862_1385166_1386760_1387278_1387420_1389240_1389728_1391898
H1_mix_00089861	chrX	-	1451	4	FSM	ENSG00000169100.14	ENST00000381401.11	1451	4	0	0	0	0	multi-exon	FALSE	canonical	3	4519	junction_3	194.732865456473	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGCCTGGCCACGCACC	-3	True	NA	30	True	AATAAA	-18	NA	1392113	1386151	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_1386760_1387278_1387420_1389240_1389728_1391898
H1_mix_00089862	chrX	-	854	4	FSM	ENSG00000169100.14	ENST00000484026.6	854	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	2332.51657133568	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGGTGTCCTACCCCTTC	55	False	NA	NA	False	NA	NA	NA	1392088	1387344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_1387420_1389240_1389728_1390191_1390294_1391898
H1_mix_00089863	chrX	-	2075	13	FSM	ENSG00000169093.16	ENST00000381317.9	2065	13	0	-10	0	10	multi-exon	TRUE	canonical	1	190	junction_11	118.025303313409	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATAGGGGTTTTGATGA	-19	True	NA	-4	True	AATAAA	-26	NA	1452909	1403128	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_1403490_1412731_1412855_1417972_1418117_1418981_1419115_1421657_1421843_1425524_1425688_1427733_1428122_1432268_1432378_1435021_1435084_1435693_1435759_1439096_1439145_1442185_1442318_1452747
H1_mix_00089864	chrX	-	1477	2	FSM	ENSG00000169093.16	ENST00000474865.6	851	2	-77	-549	-20	549	multi-exon	FALSE	canonical	3	687	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATATACAATTATAATTAAT	802	False	NA	NA	False	AATATA	-39	NA	1452949	1441042	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_1442318_1452747
H1_mix_00089865	chrX	-	2579	7	FSM	ENSG00000169084.15	ENST00000334651.11	2579	7	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_6	75.9334503949932	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTCATCCTCCGGGAATG	-31	True	NA	NA	False	AATAAA	-30	NA	2500976	2219505	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_2221230_2243022_2243231_2266739_2266948_2291501_2291604_2408744_2408814_2425196_2425305_2500816
H1_mix_00089866	chrX	-	1490	7	NIC	ENSG00000169084.15	novel	2579	7	NA	NA	0	-1208	combination_of_known_junctions	FALSE	canonical	3	114	junction_6	79.1973624701115	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAGAGATGCTCTCTTTT	2247	False	NA	-1	True	AATACA	-18	NA	2500589	2220713	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_2221230_2243022_2243231_2266739_2266948_2291501_2291604_2408744_2408814_2425196_2425305_2500310
H1_mix_00089867	chrX	-	1371	6	NIC	ENSG00000169084.15	novel	2579	7	NA	NA	4	-1254	combination_of_known_junctions	FALSE	canonical	3	59	junction_4	107.80241184686	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCATTTTCCTTGCCGC	2251	False	NA	46	True	CATAAA	-23	NA	2500585	2220759	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_2221230_2243022_2243231_2266739_2266948_2291501_2291604_2425196_2425305_2500310
H1_mix_00089868	chrX	-	744	5	FSM	ENSG00000169084.15	ENST00000412516.7	744	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	108.040212421117	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCTGGCGAAGAAGCTTCT	-28	True	NA	NA	False	NA	NA	NA	2500973	2243061	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_2243231_2266739_2266948_2291501_2291604_2425196_2425305_2500816
H1_mix_00089869	chrX	-	4756	2	FSM	ENSG00000214717.12	ENST00000381222.8	4507	2	-6	-243	3	243	multi-exon	FALSE	canonical	3	71	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCCGGGAGCAGAGATTT	-28	True	NA	NA	False	AATAAA	-21	NA	2500973	2486170	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_2490770_2500816
H1_mix_00089870	chrX	-	4510	2	FSM	ENSG00000214717.12	ENST00000381223.9	4510	2	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGCGTGTCCGTCTGGAC	-22	True	NA	-7	True	AATAAA	-35	NA	2500967	2486413	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_2490773_2500816
H1_mix_00089871	chrX	-	4678	2	FSM	ENSG00000214717.12	ENST00000381218.8	2832	2	-95	-1751	-95	0	multi-exon	FALSE	canonical	3	63	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTCCTCATTCATTTGT	2186	False	NA	-28	True	AATAAA	-14	NA	2500650	2486434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_2490773_2500310
H1_mix_00089872	chrX	-	2577	2	NNC	ENSG00000289007.1	novel	1481	3	NA	NA	23990	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	0	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTCAGGTGCACCTCTTT	NA	False	NA	-3	True	AATAAA	-19	NA	2585154	2566026	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_2567293_2583843
H1_mix_00089873	chrX	-	1344	2	FSM	ENSG00000289007.1	ENST00000686824.1	1371	2	24	3	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTCAGGTGCACCTCTTT	-14	False	NA	-3	True	AATAAA	-19	NA	2609183	2566026	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_2567293_2609105
H1_mix_00089874	chrX	-	5143	10	FSM	ENSG00000006756.16	ENST00000381154.6	5145	10	0	2	0	-2	multi-exon	FALSE	canonical	1	4	junction_2	3.78430808131698	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGGTGTCATTTGTTTG	0	True	NA	-3	True	AATAAA	-17	NA	2929339	2903973	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_2907633_2908720_2908843_2909816_2909980_2910658_2910794_2915555_2915693_2917803_2918228_2920600_2920724_2921902_2922025_2925615_2925766_2929231
H1_mix_00089875	chrX	-	629	4	FSM	ENSG00000006756.16	ENST00000494870.5	663	4	0	34	0	-34	multi-exon	FALSE	canonical	2	6	junction_3	4.10960933531265	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGTGACAAAGCGAGACTC	19	True	NA	NA	False	NA	NA	NA	2929279	2920414	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_2920724_2921902_2922025_2925615_2925766_2929231
H1_mix_00089876	chrX	-	2219	11	FSM	ENSG00000157399.17	ENST00000381134.9	2219	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	19.6063765137773	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGGCAACAGAGCAAGACC	1	True	NA	NA	False	NA	NA	NA	2964341	2934520	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_2935191_2936741_2936864_2938094_2938258_2943064_2943200_2945997_2946135_2949303_2949728_2953142_2953266_2955415_2955538_2958273_2958436_2960377_2960421_2964223
H1_mix_00089877	chrX	-	1411	7	FSM	ENSG00000157399.17	ENST00000681960.1	1407	7	0	-4	0	4	multi-exon	FALSE	canonical	0	0	junction_3	26.0986376826241	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTAATTTTTTACCAAAAA	4000	False	NA	NA	False	AATAAA	-39	NA	2964243	2951905	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_2952561_2953142_2953266_2955415_2955538_2958273_2958436_2959602_2959889_2960377_2960421_2964223
H1_mix_00089878	chrX	-	1170	6	FSM	ENSG00000157399.17	ENST00000682745.1	1338	6	0	168	0	4	multi-exon	FALSE	canonical	0	0	junction_3	23.3666428910958	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTAATTTTTTACCAAAAA	-3	True	NA	NA	False	AATAAA	-39	NA	2964288	2951905	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_2952561_2953142_2953266_2955415_2955538_2958273_2958436_2960377_2960421_2964223
H1_mix_00089879	chrX	-	10184	7	FSM	ENSG00000101825.8	ENST00000217939.7	9804	7	-379	-1	-379	1	multi-exon	FALSE	canonical	2	14	junction_3	5.29150262212918	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGCAGTGATGACAATGCT	125	False	NA	-4	True	AATAAA	-20	NA	3347031	3308563	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_3311625_3317102_3318004_3320007_3324976_3330017_3330409_3330643_3330774_3343645_3343862_3346514
H1_mix_00089880	chrX	-	6102	9	FSM	ENSG00000183943.6	ENST00000262848.6	6102	9	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	11.4503002144049	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGCTGTGGCTTTTCTCCT	-24	True	NA	26	True	NA	NA	NA	3713649	3604339	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_3608946_3612176_3612326_3615814_3615893_3621258_3621317_3626418_3626515_3641851_3641972_3655148_3655413_3674597_3674767_3713087
H1_mix_00089881	chrX	-	2949	9	NIC	ENSG00000183943.6	novel	669	7	NA	NA	12	1081	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	44.1014455545394	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCTCTGAGGAAGCATGT	-12	True	NA	-8	True	AATAAA	-22	NA	3713637	3609869	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_3611335_3612176_3612326_3615814_3615893_3621258_3621317_3626418_3626515_3641851_3641972_3655148_3655413_3674597_3674767_3713087
H1_mix_00089883	chrX	-	926	5	FSM	ENSG00000285756.2	ENST00000471090.5	922	5	0	-4	0	-3	multi-exon	FALSE	canonical	2	3	junction_4	21.6448608219134	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGGGCTGTGTGCTGGTTG	NA	False	NA	-7	True	ATTAAA	-22	NA	3824598	3817530	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_3817779_3818441_3818501_3818656_3818704_3822373_3822581_3824233
H1_mix_00089884	chrX	-	1672	5	FSM	ENSG00000285756.2	ENST00000662024.1	1470	5	-205	3	0	-3	multi-exon	FALSE	canonical	3	12	junction_3	23.8890665368072	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGGGCTGTGTGCTGGTTG	138	False	NA	-7	True	ATTAAA	-22	NA	3843771	3817530	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_3817779_3818441_3818501_3818656_3818704_3828505_3829393_3843340
H1_mix_00089885	chrX	-	1770	4	NIC	ENSG00000285756.2	novel	1470	5	NA	NA	-59	-3	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	20.7257220756131	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGGGCTGTGTGCTGGTTG	NA	False	NA	-7	True	ATTAAA	-22	NA	3843916	3817530	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_3817779_3818441_3818501_3828505_3829393_3843340
H1_mix_00089886	chrX	-	856	4	FSM	ENSG00000285756.2	ENST00000425492.5	856	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	31.3297870333578	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTGTGTGCTGGTTGGTC	52	False	NA	-4	True	ATTAAA	-25	NA	3843857	3817527	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_3817779_3818441_3818501_3829363_3829393_3843340
H1_mix_00089887	chrX	-	1903	3	FSM	ENSG00000285756.2	ENST00000490920.2	1306	3	-597	0	-248	0	multi-exon	FALSE	canonical	2	4	junction_1	34	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTGTGTGCTGGTTGGTC	NA	False	NA	-4	True	ATTAAA	-25	NA	3844105	3817527	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_3817779_3828505_3829393_3843340
H1_mix_00089888	chrX	-	4936	5	NIC	ENSG00000285756.2	novel	2670	11	NA	NA	521	1502	combination_of_known_splicesites	FALSE	canonical	3	22	junction_3	39.8779387631808	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTCTGTCTATCATCT	NA	False	NA	NA	False	NA	NA	NA	3881796	3851231	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_3854928_3860789_3860997_3863501_3863646_3866949_3867807_3881764
H1_mix_00089889	chrX	-	2427	4	FSM	ENSG00000285756.2	ENST00000424415.2	2427	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	15.4128373622625	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGAAAGTAGCCTCCACT	NA	False	NA	NA	False	ATTAAA	-10	NA	3903602	3891437	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_3893352_3899215_3899423_3901927_3902072_3903440
H1_mix_00089890	chrX	-	4382	2	FSM	ENSG00000285756.2	ENST00000381106.4	1099	2	-389	-2894	-389	2894	multi-exon	FALSE	canonical	3	120	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTGCCTAAGTGTGCCG	NA	False	NA	NA	False	NA	NA	NA	3921135	3902792	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_3906233_3920193
H1_mix_00089891	chrX	-	5671	2	Intergenic	novelGene_1636	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	29	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGAAAGACGGCTGAGGC	NA	False	NA	NA	False	NA	NA	NA	4897326	4891613	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_4892687_4892728
H1_mix_00089892	chrX	-	5868	6	FSM	ENSG00000146938.16	ENST00000381095.8	5858	6	0	-10	0	0	multi-exon	FALSE	canonical	3	118	junction_5	19.8836616346185	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATTATGCGTCCATTC	-8	True	NA	NA	False	AATAAA	-30	NA	6228867	5890031	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_5893667_5903076_5903867_5909053_5909240_6029279_6029433_6150994_6151772_6228540
H1_mix_00089893	chrX	-	2103	4	FSM	ENSG00000130021.15	ENST00000381077.10	2103	4	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	10.6144555520604	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTTGTATGAGAGTCAT	-11	True	NA	-4	True	AATAAA	-18	NA	7148153	7048919	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_7050473_7077219_7077450_7105619_7105839_7148052
H1_mix_00089894	chrX	-	1328	5	FSM	ENSG00000130021.15	ENST00000424830.6	1334	5	6	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	51.895929512824	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATATCTATCGTCTGCAT	-10	True	NA	NA	False	NA	NA	NA	7148152	7049762	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_7050473_7077219_7077450_7105619_7105839_7116965_7117035_7148052
H1_mix_00089895	chrX	-	3342	7	FSM	ENSG00000006757.12	ENST00000381042.9	3342	7	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_6	15.0268278607148	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCTTCTTTTCAATAAG	-6	True	NA	NA	False	ATTAAA	-17	NA	7927413	7898246	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_7900818_7901988_7902142_7912027_7912094_7921712_7921849_7922003_7922099_7925939_7926133_7927285
H1_mix_00089896	chrX	-	2752	7	FSM	ENSG00000006757.12	ENST00000444736.5	2752	7	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_6	60.1758995685888	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGGGGTACGTGTACAGG	NA	False	NA	NA	False	NA	NA	NA	7927739	7898762	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_7900818_7901988_7902142_7912027_7912094_7921712_7921849_7922003_7922099_7925939_7926133_7927685
H1_mix_00089897	chrX	-	652	6	FSM	ENSG00000006757.12	ENST00000442940.1	652	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_5	51.3754805330325	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCGCAGGACAAAGGGCA	NA	False	NA	NA	False	NA	NA	NA	7927739	7902048	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_7902142_7912027_7912094_7921712_7921849_7922003_7922099_7925939_7926133_7927670
H1_mix_00089898	chrX	-	6268	14	FSM	ENSG00000011201.12	ENST00000262648.8	6265	14	0	-3	0	3	multi-exon	FALSE	canonical	3	217	junction_1	36.9020773617078	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGTCGACTCATTTATTT	13	True	NA	1	True	AATAAA	-20	NA	8732137	8528870	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_8533054_8534318_8534461_8535590_8535812_8536770_8536943_8539663_8539759_8553951_8554099_8568231_8568377_8570498_8570705_8585266_8585397_8587793_8587979_8597033_8597257_8623607_8623671_8699697_8699746_8731829
H1_mix_00089899	chrX	-	1881	9	NIC	ENSG00000011201.12	novel	704	3	NA	NA	-166	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	85.2040748732125	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGGATTTTCGCCCATA	NA	False	NA	0	True	AATAAA	-15	NA	8732303	8565805	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_8566213_8568231_8568377_8570498_8570705_8585266_8585397_8587793_8587979_8597033_8597257_8623607_8623671_8699697_8699746_8731829
H1_mix_00089900	chrX	-	1645	9	FSM	ENSG00000101850.13	ENST00000467482.6	1645	9	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_8	25.5085769889267	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTGCTTAATGATGGGG	1	True	NA	49	True	AATAAA	-15	NA	9765847	9725345	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_9725841_9739484_9739720_9741337_9741456_9743564_9743674_9746043_9746154_9748573_9748667_9759331_9759427_9760716_9760827_9765567
H1_mix_00089901	chrX	-	1412	9	NNC	ENSG00000101850.13	novel	1645	9	NA	NA	275	-64	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_8	49.7680557687358	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCCTGACTTGGATTCT	282	False	NA	-15	True	AATAAA	-18	NA	9786022	9725409	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_9725841_9739484_9739720_9741337_9741456_9743564_9743674_9746043_9746154_9748573_9748667_9759331_9759427_9760716_9760827_9785911
H1_mix_00089902	chrX	-	6173	10	FSM	ENSG00000101871.17	ENST00000317552.9	6168	10	0	-5	0	5	multi-exon	FALSE	canonical	3	94	junction_8	17.3205080756888	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCTGCCTGTCTCTGTT	-11	True	NA	-1	True	AATAAA	-27	NA	10620585	10445550	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_10449717_10454869_10455078_10459645_10459808_10469696_10469841_10474622_10474751_10482479_10482629_10495583_10495692_10523091_10523188_10566887_10567604_10620289
H1_mix_00089903	chrX	-	669	1	FSM	ENSG00000197582.5	ENST00000388829.3	606	1	-21	-42	-21	42	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGGGGGGTTTTCATCT	-3	True	NA	NA	False	NA	NA	NA	13379361	13378692	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_13378700_13379400
H1_mix_00089904	chrX	-	2674	5	NNC	ENSG00000196459.15	novel	2716	5	NA	NA	0	18	at_least_one_novel_splicesite	FALSE	non_canonical	3	71	junction_4	28.5175384631984	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTTTAAAGTGCTGCTT	38	False	NA	3	True	AATAAA	-33	NA	13734575	13712225	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_13714506_13716003_13716086_13716529_13716679_13719870_13719983_13734524
H1_mix_00089905	chrX	-	2859	6	FSM	ENSG00000196459.15	ENST00000380579.6	2842	6	2	-19	2	18	multi-exon	FALSE	canonical	0	0	junction_2	52.1635888335916	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTTTAAAGTGCTGCTT	-5	True	NA	3	True	AATAAA	-33	NA	13734618	13712225	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_13714506_13716003_13716090_13716533_13716679_13719870_13719983_13734043_13734186_13734524
H1_mix_00089906	chrX	-	2717	5	FSM	ENSG00000196459.15	ENST00000359680.9	2716	5	17	-18	2	18	multi-exon	FALSE	canonical	0	0	junction_2	51.073476482417	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTTTAAAGTGCTGCTT	-5	True	NA	3	True	AATAAA	-33	NA	13734618	13712225	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_13714506_13716003_13716090_13716533_13716679_13719870_13719983_13734524
H1_mix_00089907	chrX	-	794	6	FSM	ENSG00000196459.15	ENST00000458511.7	794	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	57.5520633861202	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTATTTATAAAGAGTTC	14	True	NA	NA	False	AATAGA	-25	NA	13734599	13714199	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_13714506_13716003_13716090_13716533_13716679_13719870_13719983_13720427_13720498_13734524
H1_mix_00089909	chrX	-	475	2	FSM	ENSG00000196459.15	ENST00000517553.1	475	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACCTTTAGATGATTGTG	5490	False	NA	NA	False	NA	NA	NA	13716718	13715799	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_13716090_13716533
H1_mix_00089911	chrX	-	2988	7	NIC	ENSG00000046653.15	novel	3118	8	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_6	323.742395878095	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCCTTTTTACCATACAT	-17	True	NA	-5	True	AATAAA	-17	NA	13817083	13770938	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_13773031_13776237_13776304_13777351_13777426_13779817_13779990_13783364_13783522_13785621_13785809_13816843
H1_mix_00089912	chrX	-	3076	7	NIC	ENSG00000046653.15	novel	3118	8	NA	NA	-196	0	combination_of_known_junctions	FALSE	canonical	3	477	junction_1	152.062943838691	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCCTTTTTACCATACAT	-1	True	NA	-5	True	AATAAA	-17	NA	13938834	13770938	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_13773031_13776237_13776304_13777351_13777426_13779817_13779990_13783364_13783522_13785621_13785809_13938506
H1_mix_00089913	chrX	-	3957	7	FSM	ENSG00000046653.15	ENST00000454189.6	3957	7	0	0	0	0	multi-exon	FALSE	canonical	3	465	junction_1	156.191566851593	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCATTTGGATTCTCTT	15	True	NA	-6	True	ATTAAA	-19	NA	13938638	13771455	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_13774625_13776237_13776304_13777351_13777426_13779817_13779990_13783364_13783522_13785621_13785809_13938506
H1_mix_00089914	chrX	-	1673	8	FSM	ENSG00000046653.15	ENST00000355135.6	1673	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	373.548893065157	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTATATGTGGGTAGTT	-3	True	NA	NA	False	AAAAAG	-44	NA	13817069	13773953	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_13774625_13776237_13776304_13777351_13777426_13779817_13779990_13783364_13783522_13785621_13785809_13807649_13807770_13816843
H1_mix_00089915	chrX	-	1033	7	FSM	ENSG00000046653.15	ENST00000398361.7	1033	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_6	323.850102499426	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGATTCAGTTATTTAC	-18	True	NA	NA	False	NA	NA	NA	13938415	13774336	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_13774625_13776237_13776304_13777351_13777426_13779817_13779990_13783364_13783522_13785621_13785809_13938326
H1_mix_00089916	chrX	-	3147	5	FSM	ENSG00000046647.14	ENST00000680255.1	3147	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	25.6843824142221	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCTGTCTTTAAAAATCA	8	True	NA	-21	True	AATAAA	-15	NA	14029892	14006725	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_14009170_14020077_14020535_14021463_14021512_14026139_14026222_14029776
H1_mix_00089917	chrX	-	1119	4	FSM	ENSG00000046647.14	ENST00000398355.7	1119	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	39.3474550920669	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGGTTTTTTATGTTG	7	True	NA	-14	True	CATAAA	-17	NA	14029893	14008672	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_14009170_14020077_14020535_14021463_14021512_14029776
H1_mix_00089919	chrX	-	1316	1	FSM	ENSG00000231066.3	ENST00000453156.3	844	1	-431	-41	-431	41	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATTTCATTTCCATAACA	NA	False	NA	NA	False	ATTAAA	-11	NA	14835750	14834434	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_14834400_14835800
H1_mix_00089920	chrX	-	3457	1	NIC	ENSG00000181544.15	novel	3040	11	NA	NA	29587	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGAGATCCTATTTTC	NA	False	NA	-14	True	AATAAA	-18	NA	14839417	14835960	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_14836000_14839400
H1_mix_00089921	chrX	-	4090	10	FSM	ENSG00000181544.15	ENST00000398334.5	3008	10	10	-1092	0	1090	multi-exon	TRUE	canonical	3	29	junction_4	21.2939451198089	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGAGAATATAGGTTATT	1	True	NA	NA	False	NA	NA	NA	14873052	14842314	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_14843982_14844502_14844741_14844855_14845287_14850504_14850675_14853038_14853168_14857861_14857955_14859181_14859335_14864559_14865581_14868922_14869044_14872985
H1_mix_00089922	chrX	-	2895	9	FSM	ENSG00000181544.15	ENST00000324138.7	2894	9	1	-2	1	0	multi-exon	FALSE	canonical	3	6	junction_8	11.5081492864839	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGGCCATTTTATCTCCC	-15	True	NA	NA	False	AATAAA	-17	NA	14873068	14843404	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_14843982_14844502_14844741_14844855_14845287_14850504_14850675_14853038_14853168_14857861_14857955_14859181_14859335_14864559_14865581_14872985
H1_mix_00089923	chrX	-	1649	7	FSM	ENSG00000102048.16	ENST00000380485.7	1652	7	0	3	0	-1	multi-exon	FALSE	canonical	0	0	junction_3	0.957427107756338	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTGTTTTAAGCTTCCC	8	True	NA	NA	False	AATAAA	-23	NA	15270061	15243989	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_15244631_15248682_15248936_15250429_15250565_15252253_15252405_15254736_15254845_15258865_15258946_15269780
H1_mix_00089924	chrX	-	3590	6	FSM	ENSG00000165195.16	ENST00000333590.6	3590	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	10.8921990433521	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGAGTTTGTCTTATT	11	True	NA	-7	True	AATAAA	-23	NA	15335523	15319455	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_15321773_15324664_15324872_15325019_15325153_15325913_15326047_15331215_15331993_15335500
H1_mix_00089925	chrX	-	3220	6	FSM	ENSG00000165195.16	ENST00000635598.1	3246	6	27	-1	-4	0	multi-exon	FALSE	canonical	2	6	junction_4	15.0013332740793	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGAGTTTGTCTTATT	7	True	NA	-7	True	AATAAA	-23	NA	15335527	15319455	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_15321773_15324664_15324872_15325019_15325153_15325913_15326047_15331589_15331993_15335500
H1_mix_00089926	chrX	-	2946	6	FSM	ENSG00000165195.16	ENST00000638131.1	2963	6	17	0	-4	0	multi-exon	FALSE	canonical	2	3	junction_4	15.8871016865884	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGCTACATGTCCAAAAATA	7	True	NA	-51	True	NA	NA	NA	15335527	15319499	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_15321773_15324664_15324872_15325019_15325153_15325913_15326047_15331819_15331993_15335500
H1_mix_00089927	chrX	-	2071	7	FSM	ENSG00000165197.5	ENST00000297904.4	2069	7	0	-2	0	2	multi-exon	FALSE	canonical	0	0	junction_3	1	629	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTTATGTTATTTAATA	-3	True	NA	NA	False	AATAAA	-20	NA	15384413	15345593	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_15346260_15347163_15347360_15353067_15353169_15355149_15355299_15358002_15358194_15363108_15363320_15383856
H1_mix_00089928	chrX	-	1275	10	FSM	ENSG00000087842.11	ENST00000380420.10	1274	10	0	-1	0	1	multi-exon	TRUE	canonical	3	76	junction_7	8.62525719781127	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTTTTTCATTTGAGAT	-6	True	NA	1	True	AATAAA	-25	NA	15493333	15384797	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_15385117_15390184_15390252_15397448_15397532_15407505_15407551_15425905_15425991_15455847_15456055_15459656_15459741_15479728_15479822_15491161_15491310_15493189
H1_mix_00089929	chrX	-	1519	10	FSM	ENSG00000087842.11	ENST00000380421.3	1539	10	21	-1	21	1	multi-exon	FALSE	canonical	3	12	junction_9	25.8977095130958	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTTTTTCATTTGAGAT	NA	False	NA	1	True	AATAAA	-25	NA	15493543	15384797	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_15385117_15390184_15390252_15397448_15397532_15407505_15407551_15425905_15425991_15455847_15456055_15459656_15459741_15479728_15479822_15491161_15491310_15493155
H1_mix_00089930	chrX	-	1320	6	FSM	ENSG00000147003.7	ENST00000380342.4	1352	6	28	4	28	-4	multi-exon	FALSE	canonical	3	4	junction_1	6.01331855134916	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGACTGATTGTGGTCT	253	False	NA	-12	True	AATAAA	-23	NA	15664777	15627321	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_15628128_15639561_15639757_15644915_15645030_15659015_15659102_15664336_15664396_15664717
H1_mix_00089932	chrX	-	642	1	NIC	ENSG00000279413.1	novel	639	2	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGCCCCATGCTGTCTGG	NA	False	NA	NA	False	NA	NA	NA	15703243	15702601	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_15702600_15703200
H1_mix_00089933	chrX	-	2128	6	FSM	ENSG00000182287.15	ENST00000672987.1	2128	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	907.897659430841	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTTGACTTTTCTACTC	11	True	NA	-8	True	AATAAA	-21	NA	15854813	15825805	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_15827373_15828191_15828201_15845378_15845517_15845902_15846012_15852345_15852525_15854687
H1_mix_00089934	chrX	-	2241	5	FSM	ENSG00000182287.15	ENST00000329235.6	2237	5	0	-4	0	4	multi-exon	FALSE	canonical	3	497	junction_1	593.850307316583	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTTTTCTACTCTTTC	310	False	NA	-4	True	AATAAA	-25	NA	15854931	15825801	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_15827373_15845378_15845517_15845902_15846012_15852345_15852525_15854687
H1_mix_00089935	chrX	-	3994	5	NIC	ENSG00000182287.15	novel	1946	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	574	junction_1	561.137460877457	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCGTCTCATGTGAATGAC	452	False	NA	-14	True	AATAAA	-14	NA	15854789	15830058	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_15833525_15845378_15845517_15845902_15846012_15852345_15852525_15854687
H1_mix_00089936	chrX	-	3492	5	FSM	ENSG00000182287.15	ENST00000380291.5	3492	5	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_1	671.844662105758	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCGTCTCATGTGAATGAC	20	True	NA	-14	True	AATAAA	-14	NA	15854804	15830058	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_15833008_15845378_15845517_15845902_15846012_15852345_15852525_15854687
H1_mix_00089937	chrX	-	1974	5	FSM	ENSG00000182287.15	ENST00000450644.2	1925	5	-49	0	0	0	multi-exon	FALSE	canonical	3	407	junction_1	632.169429425372	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATACAGCTGCTTGCTTT	20	True	NA	-93	True	NA	NA	NA	15854804	15830137	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_15831569_15845378_15845517_15845902_15846012_15852345_15852525_15854687
H1_mix_00089938	chrX	-	3494	6	FSM	ENSG00000182287.15	ENST00000673591.1	2365	6	23	-1152	0	0	multi-exon	FALSE	canonical	3	232	junction_1	721.122070110186	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATACAGCTGCTTGCTTT	20	True	NA	-93	True	NA	NA	NA	15854804	15830137	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_15833008_15833443_15833525_15845378_15845517_15845902_15846012_15852345_15852525_15854687
H1_mix_00089939	chrX	-	392	4	FSM	ENSG00000238178.7	ENST00000422438.5	392	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	41.6119640915393	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAACAGGGCTTGAGGCT	NA	False	NA	NA	False	NA	NA	NA	16157829	16152940	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_16153103_16153393_16153464_16154597_16154681_16157752
H1_mix_00089940	chrX	-	894	5	FSM	ENSG00000238178.7	ENST00000454712.7	894	5	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	4.12310562561766	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGAGAGTGTCCCTCATA	1075	False	NA	-5	True	ATTAAA	-21	NA	16167603	16153199	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_16153464_16154597_16154681_16157752_16157860_16159652_16159696_16167206
H1_mix_00089941	chrX	-	1057	6	FSM	ENSG00000238178.7	ENST00000435789.1	1037	6	0	-20	0	0	multi-exon	FALSE	canonical	2	8	junction_3	39.0517605236947	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGAGAGTGTCCCTCATA	NA	False	NA	-5	True	ATTAAA	-21	NA	16170869	16153199	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_16153464_16154597_16154681_16157752_16157860_16167206_16167343_16168680_16168894_16170615
H1_mix_00089942	chrX	-	3771	2	Intergenic	novelGene_1648	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	35	junction_1	0	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAATAAAGAATTTGTGAA	-2	False	NA	NA	False	GATAAA	-23	NA	16184131	16179017	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_16182538_16183880
H1_mix_00089943	chrX	-	811	3	Intergenic	novelGene_1649	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	17	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTAGTAGTCTCTTCAC	13	False	NA	5	True	ATTAAA	-23	NA	16184116	16179235	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_16179622_16182348_16182538_16183880
H1_mix_00089944	chrX	-	3953	19	FSM	ENSG00000047230.15	ENST00000359276.9	3953	19	0	0	0	0	multi-exon	FALSE	canonical	2	125	junction_18	37.1408729628753	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTCACCTTTTGGTTA	-41	True	NA	-8	True	AATAAA	-26	NA	16712669	16587998	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_16589776_16590751_16590863_16609540_16609686_16617149_16617247_16620276_16620333_16639146_16639244_16667513_16667558_16667661_16667725_16670579_16670675_16678361_16678451_16683093_16683227_16689449_16689602_16691539_16691621_16693140_16693225_16693370_16693488_16698235_16698337_16698922_16699094_16702736_16702942_16712334
H1_mix_00089945	chrX	-	4036	19	NNC	ENSG00000047230.15	novel	4319	19	NA	NA	-43	0	at_least_one_novel_splicesite	FALSE	canonical	2	27	junction_18	55.0483513618194	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTTGTTTCACCTTTTG	-2	True	NA	-12	True	AATAAA	-22	NA	16712979	16588002	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_16589776_16590751_16590863_16609540_16609686_16617149_16617247_16620276_16620333_16639146_16639244_16667513_16667558_16667661_16667725_16670579_16670675_16678361_16678451_16683093_16683227_16689449_16689602_16691539_16691621_16693140_16693225_16693370_16693488_16698235_16698337_16698922_16699094_16702736_16702942_16712557
H1_mix_00089946	chrX	-	3526	19	FSM	ENSG00000047230.15	ENST00000380241.7	3526	19	0	0	0	0	multi-exon	FALSE	canonical	2	54	junction_18	49.748410235782	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAATGCTGAATAATTAAT	6728	False	16712957	NA	False	NA	NA	NA	16712936	16588305	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_16589776_16590751_16590863_16609540_16609686_16617149_16617247_16620276_16620333_16639146_16639244_16667513_16667558_16667661_16667725_16670579_16670675_16678361_16678451_16683093_16683227_16689449_16689602_16691539_16691621_16693140_16693225_16693370_16693488_16698235_16698337_16698922_16699094_16702736_16702942_16712721
H1_mix_00089947	chrX	-	4191	19	NNC	ENSG00000047230.15	novel	3953	19	NA	NA	-49	0	at_least_one_novel_splicesite	FALSE	canonical	2	44	junction_18	51.6884362739331	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTCACCTTTTGGTTA	6679	False	NA	-8	True	AATAAA	-26	NA	16712985	16587998	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_16589776_16590751_16590863_16609540_16609686_16617149_16617247_16620276_16620333_16639146_16639244_16667513_16667558_16667661_16667725_16670579_16670675_16678361_16678451_16683093_16683227_16689449_16689602_16691539_16691621_16693140_16693225_16693370_16693488_16698235_16698337_16698922_16699094_16702736_16702942_16712412
H1_mix_00089948	chrX	-	2281	12	FSM	ENSG00000102054.18	ENST00000380087.7	2281	12	0	0	0	0	multi-exon	FALSE	canonical	3	757	junction_9	67.0604759751713	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAGATATCTGCATCAT	-11	True	NA	-4	True	AATAAA	-20	NA	16870362	16844340	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_16845104_16845827_16845939_16849243_16849302_16852045_16852123_16852550_16852629_16852748_16852876_16853681_16853843_16857593_16857710_16858675_16858850_16862954_16863101_16869075_16869221_16870037
H1_mix_00089949	chrX	-	2040	12	FSM	ENSG00000102054.18	ENST00000380084.8	2036	12	0	-4	0	0	multi-exon	FALSE	canonical	3	79	junction_11	228.773336884833	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGTTTTTTTAAAAGCT	-21	True	NA	-13	True	AATAAA	-15	NA	16869886	16844649	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_16845104_16845827_16845939_16849243_16849302_16852045_16852123_16852550_16852629_16852748_16852876_16853681_16853843_16857593_16857710_16858675_16858850_16862954_16863101_16869075_16869221_16869493
H1_mix_00089951	chrX	-	210	1	FSM	ENSG00000214322.3	ENST00000453841.1	458	1	110	138	110	-138	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGATGAAAGGGAAAAATTC	NA	False	NA	NA	False	NA	NA	NA	17100129	17099919	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_17099900_17100100
H1_mix_00089952	chrX	-	2391	2	NIC	ENSG00000131831.18	novel	2377	3	NA	NA	-206	0	intron_retention	FALSE	canonical	3	20	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTTGCAGTATTTCATCA	385	False	NA	0	True	AATAAA	-43	NA	17860913	17800048	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_17802035_17860508
H1_mix_00089953	chrX	-	4162	15	FSM	ENSG00000102098.19	ENST00000251900.9	4162	15	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	17.421104958044	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAAGCCTCAGATGTGAT	-1	True	NA	-11	True	AATAAA	-19	NA	18354688	18239312	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_18241380_18242438_18242591_18246576_18246829_18247768_18247883_18256847_18257031_18258043_18258248_18260170_18260292_18265584_18265803_18304971_18305216_18320331_18320421_18323858_18324094_18324906_18324978_18330586_18330656_18334049_18334096_18354591
H1_mix_00089954	chrX	-	4004	14	NIC	ENSG00000102098.19	novel	4162	15	NA	NA	6	0	intron_retention	FALSE	canonical	3	68	junction_1	26.5441465482756	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAAGCCTCAGATGTGAT	5	True	NA	-11	True	AATAAA	-19	NA	18354682	18239312	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_18241380_18246576_18246829_18247768_18247883_18256847_18257031_18258043_18258248_18260170_18260292_18265584_18265803_18304971_18305216_18320331_18320421_18323858_18324094_18324906_18324978_18330586_18330656_18334049_18334096_18354591
H1_mix_00089955	chrX	-	1499	8	FSM	ENSG00000102098.19	ENST00000665583.1	1514	8	15	0	15	0	multi-exon	FALSE	canonical	2	4	junction_7	58.051349542224	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTAGTAACAGTTCAGT	NA	False	NA	NA	False	CATAAA	-22	NA	18288850	18241122	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_18241380_18246576_18246829_18247768_18247883_18256847_18257031_18258043_18258248_18260170_18260292_18265584_18265803_18288700
H1_mix_00089956	chrX	-	5077	33	FSM	ENSG00000044446.12	ENST00000379942.5	5077	33	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_4	19.102928440425	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTGGCCAGGAGGTGCG	-9	True	NA	-10	True	AATAAA	-21	NA	18984114	18892297	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_18893656_18894203_18894405_18895137_18895192_18897162_18897334_18899172_18899227_18900669_18900700_18901484_18901604_18905757_18905860_18906494_18906625_18906735_18906815_18907017_18907098_18907899_18908057_18908800_18908935_18910871_18910961_18918680_18918855_18920031_18920202_18924055_18924135_18924380_18924526_18925667_18925778_18926452_18926588_18929227_18929307_18931640_18931749_18936054_18936151_18938626_18938750_18939994_18940049_18941528_18941676_18943709_18943809_18945077_18945159_18948743_18948827_18951103_18951273_18952493_18952542_18954253_18954413_18983854
H1_mix_00089957	chrX	-	1946	4	FSM	ENSG00000044446.12	ENST00000469485.5	1945	4	0	-1	0	0	multi-exon	FALSE	canonical	3	92	junction_3	6.54896090146283	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGGGGTTTTCTTGTGCC	NA	False	NA	-7	True	AATAGA	-21	NA	18898169	18892971	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_18893656_18894203_18894405_18895137_18895192_18897162
H1_mix_00089958	chrX	-	500	3	FSM	ENSG00000044446.12	ENST00000464455.1	500	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACTAATTCATCACTTTT	NA	False	NA	NA	False	AAAAAG	-12	NA	18926480	18924163	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_18924526_18925667_18925778_18926452
H1_mix_00089960	chrX	-	4685	27	FSM	ENSG00000173698.18	ENST00000357544.7	4678	27	0	-7	0	0	multi-exon	FALSE	canonical	2	7	junction_21	17.8216011473611	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGGTAATTTTCACAAAG	788	False	NA	2	True	AATAAA	-21	NA	19122559	18989306	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_18991049_18994895_18995049_18996050_18996153_18998995_18999280_18999860_18999961_19002845_19003115_19004757_19004880_19006001_19006106_19006219_19006266_19007234_19007358_19007979_19008124_19009625_19009783_19010612_19010779_19013685_19014075_19019598_19019666_19021103_19021199_19023415_19023454_19023908_19023949_19027218_19027275_19028182_19028239_19030983_19031038_19035941_19035978_19037466_19037491_19040188_19040225_19068716_19068836_19082701_19082747_19122441
H1_mix_00089962	chrX	-	5053	29	FSM	ENSG00000173698.18	ENST00000379869.8	4684	29	-187	-182	-18	182	multi-exon	TRUE	canonical	0	0	junction_24	16.0691665074732	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGCCCGGGCAGCACAGG	692	False	NA	NA	False	NA	NA	NA	19122655	18989124	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_18991049_18994895_18995049_18996050_18996153_18998995_18999280_18999860_18999961_19002845_19003115_19004757_19004880_19006001_19006106_19006219_19006266_19007234_19007358_19007979_19008124_19009625_19009783_19010612_19010779_19013685_19014075_19019598_19019666_19021103_19021199_19023415_19023454_19023908_19023949_19027218_19027275_19028182_19028239_19030983_19031038_19033612_19033655_19035941_19035978_19037466_19037491_19037588_19037637_19040188_19040225_19068716_19068836_19082701_19082747_19122441
H1_mix_00089963	chrX	-	4775	27	FSM	ENSG00000173698.18	ENST00000379876.5	4779	27	6	-2	6	0	multi-exon	FALSE	canonical	3	8	junction_23	15.2071008795156	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGGTAATTTTCACAAAG	-22	True	NA	2	True	AATAAA	-21	NA	19122631	18989306	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_18991049_18994895_18995049_18996050_18996153_18998995_18999280_18999860_18999961_19002845_19003115_19004757_19004880_19006001_19006106_19006219_19006266_19007234_19007358_19007979_19008124_19009625_19009783_19010612_19010779_19013685_19014075_19019598_19019666_19021103_19021199_19023415_19023454_19023908_19023949_19027218_19027275_19028182_19028239_19030983_19031038_19033612_19033655_19035941_19035978_19040188_19040225_19068716_19068836_19082701_19082747_19122441
H1_mix_00089964	chrX	-	4700	28	FSM	ENSG00000173698.18	ENST00000379873.6	4698	28	0	-2	0	0	multi-exon	FALSE	canonical	0	0	junction_23	18.2884973631643	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGGTAATTTTCACAAAG	-28	True	NA	2	True	AATAAA	-21	NA	19122637	18989306	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_18991049_18996050_18996153_18998995_18999280_18999860_18999961_19002845_19003115_19004757_19004880_19006001_19006106_19006219_19006266_19007234_19007358_19007979_19008124_19009625_19009783_19010612_19010779_19013685_19014075_19019598_19019666_19021103_19021199_19023415_19023454_19023908_19023949_19027218_19027275_19028182_19028239_19030983_19031038_19033612_19033655_19035941_19035978_19037466_19037491_19037588_19037637_19040188_19040225_19068716_19068836_19082701_19082747_19122441
H1_mix_00089965	chrX	-	4759	29	NNC	ENSG00000173698.18	novel	4684	29	NA	NA	-376	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_28	16.4153285134377	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGGTAATTTTCACAAAG	334	False	NA	2	True	AATAAA	-21	NA	19123013	18989306	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_18991049_18994895_18995049_18996050_18996153_18998995_18999280_18999860_18999961_19002845_19003115_19004757_19004880_19006001_19006106_19006219_19006266_19007234_19007358_19007979_19008124_19009625_19009783_19010612_19010779_19013685_19014075_19019598_19019666_19021103_19021199_19023415_19023454_19023908_19023949_19027218_19027275_19028182_19028239_19030983_19031038_19033612_19033655_19035941_19035978_19037466_19037491_19037597_19037637_19040188_19040225_19068716_19068836_19082701_19082747_19122902
H1_mix_00089966	chrX	-	2020	8	FSM	ENSG00000180815.15	ENST00000470101.1	2049	8	29	0	29	0	multi-exon	FALSE	canonical	2	10	junction_4	4.52656557650139	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAAATGGTCAGCGCGAA	NA	False	NA	-4	True	AATAAA	-14	NA	19373149	19360059	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_19360834_19361338_19361416_19361492_19361594_19362737_19362851_19369053_19369220_19370958_19371065_19371344_19371531_19372652
H1_mix_00089967	chrX	-	4739	18	FSM	ENSG00000147010.18	ENST00000397821.8	4728	18	0	-11	0	11	multi-exon	FALSE	canonical	3	503	junction_4	41.5067426881623	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTGTCATGGTCCAAGA	-5	True	NA	10	True	ATTAAA	-29	NA	19887600	19533965	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_19536459_19537716_19537781_19541924_19542194_19545921_19546051_19549973_19550084_19569102_19569189_19588642_19588803_19592066_19592148_19594948_19595001_19607937_19608046_19631863_19631959_19645399_19645476_19683822_19684029_19695611_19695742_19706880_19706985_19746317_19746442_19836124_19836283_19887306
H1_mix_00089968	chrX	-	6528	11	ISM	ENSG00000173681.17	ENST00000379687.8	6682	12	20763	0	-5003	0	3prime_fragment	FALSE	canonical	3	25	junction_8	8.26135582092915	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGGTAAGAACATTTCAT	NA	False	NA	-7	True	AATAAA	-18	NA	19970298	19912859	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_19917335_19929784_19929941_19935808_19935899_19937504_19937533_19950752_19950869_19952987_19953052_19953777_19953893_19955390_19955567_19965043_19965707_19966079_19966650_19970223
H1_mix_00089969	chrX	-	3299	12	FSM	ENSG00000173681.17	ENST00000379687.8	6682	12	-15	3398	-15	-3	multi-exon	FALSE	canonical	3	25	junction_8	8.54255269878801	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGTTACTTGCCAGTT	NA	False	NA	NA	False	AATAAA	-27	NA	19991076	19916257	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_19917335_19929784_19929941_19935808_19935899_19937504_19937533_19950752_19950869_19952987_19953052_19953777_19953893_19955390_19955567_19965043_19965707_19966079_19966650_19970223_19970299_19990907
H1_mix_00089970	chrX	-	2541	12	NNC	ENSG00000173681.17	novel	6682	12	NA	NA	6	-195	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_8	12.7713522391534	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAATTGTATAGTGTCTT	-5	True	NA	NA	False	AATAAA	-15	NA	19991055	19916934	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_19917335_19929784_19929941_19935808_19935899_19937504_19937533_19950752_19950869_19952987_19953052_19953777_19953893_19955390_19955507_19965043_19965707_19966079_19966650_19970223_19970299_19990907
H1_mix_00089971	chrX	-	3881	17	FSM	ENSG00000184368.16	ENST00000379643.10	4062	17	27	154	18	-154	multi-exon	FALSE	canonical	2	7	junction_15	5.09901951359278	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGACTTGCTAGCGTTTT	27	True	NA	-2	True	AATACA	-17	NA	20116880	20006866	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_20008399_20010776_20011053_20012348_20012536_20013053_20013133_20013568_20013626_20015222_20015328_20016093_20016326_20024950_20025084_20025680_20025953_20042501_20042630_20044363_20044525_20050823_20050947_20052877_20052989_20056679_20056792_20063413_20063578_20064727_20064806_20116749
H1_mix_00089972	chrX	-	4414	7	FSM	ENSG00000173674.11	ENST00000379607.10	4414	7	0	0	0	0	multi-exon	FALSE	canonical	3	936	junction_4	131.466620182548	293	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGTATACAATTGATTCT	-1	True	NA	-6	True	AATAAA	-18	NA	20141838	20124524	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_20128312_20130515_20130608_20132181_20132264_20133956_20134008_20135737_20135842_20138538_20138623_20141624
H1_mix_00089973	chrX	-	7987	22	FSM	ENSG00000177189.14	ENST00000379565.9	7987	22	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	11.3066913746361	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTCCCTTTTATCAGA	-29	True	NA	0	True	AATAAA	-17	NA	20266909	20149910	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_20155521_20156108_20156250_20161643_20161762_20162963_20163041_20164898_20165061_20167588_20167748_20169401_20169492_20172745_20172872_20175163_20175289_20176249_20176353_20176433_20176499_20176995_20177085_20186295_20186367_20187827_20187971_20188496_20188535_20193486_20193594_20194188_20194269_20195064_20195146_20204021_20204104_20209287_20209405_20234757_20234815_20266563
H1_mix_00089976	chrX	-	1101	1	FSM	ENSG00000231913.1	ENST00000457739.1	473	1	-148	-480	-148	480	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTTCGCATCACTGAAAAA	NA	False	NA	NA	False	NA	NA	NA	21422442	21421341	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_21421300_21422400
H1_mix_00089977	chrX	-	2460	16	NNC	ENSG00000123130.17	novel	4318	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	82.5659063348116	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGACCCTTAAATTATT	1	True	NA	-1	True	AGTAAA	-20	NA	23743250	23701054	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_23701820_23703624_23703983_23704693_23704845_23704992_23705081_23705508_23705595_23705767_23705859_23706627_23706740_23707876_23707945_23713134_23713209_23721880_23721985_23722669_23722754_23730526_23730565_23730815_23730987_23733171_23733218_23735918_23736017_23743124
H1_mix_00089978	chrX	-	1571	14	NIC	ENSG00000123130.17	novel	1675	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_13	60.2841398279257	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAATTGTGAACCTACCA	-25	True	NA	-18	True	AATAAA	-15	NA	23743276	23703676	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_23703983_23704693_23704845_23704992_23705081_23705508_23705595_23705767_23705859_23706627_23706740_23707876_23707945_23713134_23713209_23721880_23721985_23722669_23722754_23730526_23730565_23730815_23730987_23733171_23733218_23743124
H1_mix_00089979	chrX	-	1675	15	FSM	ENSG00000123130.17	ENST00000336430.11	1675	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	64.4871842987078	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGAACCTACCATGTTGC	-25	True	NA	-12	True	AATAAA	-21	NA	23743276	23703670	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_23703983_23704693_23704845_23704992_23705081_23705508_23705595_23705767_23705859_23706627_23706740_23707876_23707945_23713134_23713209_23721880_23721985_23722669_23722754_23730526_23730565_23730815_23730987_23733171_23733218_23735918_23736017_23743124
H1_mix_00089982	chrX	-	1123	9	FSM	ENSG00000184831.14	ENST00000379226.9	1122	9	0	-1	0	1	multi-exon	TRUE	canonical	3	189	junction_1	49.7418335005858	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGATATCACTGAGTGATGG	-17	True	NA	-3	True	ATTAAA	-22	NA	23907938	23833351	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_23833613_23840312_23840378_23856301_23856383_23858641_23858734_23868592_23868689_23874402_23874458_23878914_23879035_23880844_23880953_23907693
H1_mix_00089983	chrX	-	1082	8	NIC	ENSG00000184831.14	novel	1122	9	NA	NA	-15	0	intron_retention	FALSE	canonical	2	11	junction_5	109.598897655711	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGATATCACTGAGTGATG	-32	True	NA	-4	True	ATTAAA	-21	NA	23907953	23833352	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_23833613_23840312_23840378_23856301_23856383_23858641_23858734_23868592_23868689_23878914_23879035_23880844_23880953_23907693
H1_mix_00089984	chrX	-	973	9	NIC	ENSG00000184831.14	novel	1122	9	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	143	junction_1	63.0590001506526	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCCGATATCACTGAGT	26	True	NA	-8	True	ATTAAA	-17	NA	23907895	23833356	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_23833511_23840312_23840378_23856301_23856383_23858641_23858734_23868592_23868689_23874402_23874458_23878914_23879035_23880844_23880953_23907693
H1_mix_00089985	chrX	-	580	1	FSM	ENSG00000238103.4	ENST00000330965.4	580	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTAAGAGTTACCTGGCT	31	False	NA	NA	False	AAAAAG	-27	NA	23837321	23836741	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_23836700_23837300
H1_mix_00089986	chrX	-	6449	3	FSM	ENSG00000174010.10	ENST00000685367.1	6488	3	39	0	1	0	multi-exon	FALSE	canonical	3	32	junction_2	2.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTATCTCTGATTATT	396	False	NA	NA	False	AATAAA	-24	NA	24025278	23983715	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_23989031_24005988_24006701_24024856
H1_mix_00089987	chrX	-	487	2	Genic_Genomic	ENSG00000225071.1	novel	348	1	NA	NA	-21	93419	multi-exon	FALSE	non_canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGGAGTTGTTGCCCC	2	True	NA	NA	False	NA	NA	NA	24429941	24336153	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chrX_-_24336189_24429489
H1_mix_00089988	chrX	-	348	1	FSM	ENSG00000225071.1	ENST00000419089.1	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCTGAGTTCTTAAAGAC	23	False	NA	NA	False	NA	NA	NA	24429920	24429572	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_24429600_24429900
H1_mix_00089989	chrX	-	5552	8	FSM	ENSG00000102230.14	ENST00000379144.7	5558	8	6	0	6	0	multi-exon	FALSE	canonical	3	83	junction_5	2.35606035749581	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCGTGTGTCATTGTCAT	-15	True	NA	-1	True	AATAAA	-17	NA	24647341	24558086	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_24562506_24575129_24575319_24579315_24579459_24587240_24587320_24590022_24590175_24607744_24607862_24618984_24619085_24646988
H1_mix_00089990	chrX	-	1289	9	FSM	ENSG00000102230.14	ENST00000356768.8	1289	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	27.8205746705563	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGGCAAAGTGCTTCTG	168	False	NA	NA	False	AATAAA	-14	NA	24647158	24561841	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_24562118_24562442_24562506_24575129_24575319_24579315_24579459_24587240_24587320_24590022_24590175_24607744_24607862_24618984_24619085_24646988
H1_mix_00089991	chrX	-	853	1	FSM	ENSG00000228519.3	ENST00000496795.1	606	1	-112	-135	-112	135	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAAAATGATATTCC	NA	False	NA	55	True	TATAAA	-21	NA	25646439	25645586	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_25645600_25646400
H1_mix_00089992	chrX	-	1557	2	FSM	ENSG00000169297.8	ENST00000378970.5	1813	2	0	256	0	-256	multi-exon	FALSE	canonical	3	26	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTATTTTTGTATTCAATT	-1	True	NA	-1	True	AATAAA	-24	NA	30309390	30304461	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_30304824_30308195
H1_mix_00089993	chrX	-	491	2	FSM	ENSG00000169297.8	ENST00000378963.1	475	2	0	-16	0	16	multi-exon	FALSE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCACTTTTACTTCGGT	901	False	NA	NA	False	TATAAA	-35	NA	30308488	30305657	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_30305856_30308195
H1_mix_00089994	chrX	-	475	2	Intergenic	novelGene_1657	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	204	junction_1	0	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTATTTGGGTATTTTG	NA	False	NA	-7	True	ATTAAA	-19	NA	30454506	30447196	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_30447418_30454252
H1_mix_00089995	chrX	-	3761	2	Intergenic	novelGene_1658	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_1	0	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	-1	True	AATAAA	-22	NA	30454506	30448967	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_30452475_30454252
H1_mix_00089996	chrX	-	6807	11	FSM	ENSG00000157625.16	ENST00000288422.4	6647	11	-160	0	-160	0	multi-exon	FALSE	canonical	3	25	junction_9	4.87442304278158	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTGCATCTTTTCTGCG	2	True	NA	0	True	AATAAA	-21	NA	30889414	30827441	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_30831576_30834050_30834153_30842965_30843050_30846550_30846645_30852777_30852939_30854115_30855563_30859486_30859679_30867114_30867219_30867464_30867550_30871698_30871802_30889113
H1_mix_00089997	chrX	-	4659	17	FSM	ENSG00000198947.18	ENST00000378723.7	4645	17	0	-14	0	14	multi-exon	FALSE	canonical	3	25	junction_8	8.84943501021393	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTTTGTTTTTATTTTAA	3	True	NA	NA	False	AATAAA	-41	NA	31266952	31119204	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_31121931_31134101_31134195_31146290_31146415_31147274_31147519_31169442_31169602_31172347_31172414_31173538_31173605_31177931_31177971_31178668_31178806_31180369_31180482_31182737_31182905_31203960_31204119_31206581_31206668_31209497_31209700_31223046_31223122_31260954_31261017_31266809
H1_mix_00089998	chrX	-	2807	7	FSM	ENSG00000198947.18	ENST00000684350.1	4852	7	2045	0	5	0	multi-exon	FALSE	canonical	3	34	junction_6	7.18021974284601	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTTTTTCCTTTATA	4588	False	NA	NA	False	NA	NA	NA	31173636	31119907	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_31121931_31134101_31134195_31146290_31146415_31147274_31147519_31169442_31169602_31172347_31172414_31173538
H1_mix_00090000	chrX	-	4178	4	NNC	ENSG00000147027.4	novel	4040	3	NA	NA	-113	4464	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	118.796745185492	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAGAAATCTGACTGGTT	NA	False	NA	NA	False	NA	NA	NA	34657398	34622610	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_34622637_34627075_34630492_34639246_34639388_34656803
H1_mix_00090001	chrX	-	4051	3	FSM	ENSG00000147027.4	ENST00000275954.4	4040	3	0	-11	0	11	multi-exon	FALSE	canonical	3	251	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTCGTCTCTGTTGTG	-1	True	NA	2	True	AATAAA	-32	NA	34657285	34627063	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_34630492_34639246_34639388_34656803
H1_mix_00090002	chrX	-	2151	5	FSM	ENSG00000165169.11	ENST00000378578.9	2151	5	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_4	10.256095748383	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGCTTCTGGATAATCA	-1	True	NA	0	True	AATAAA	-21	NA	37847571	37838835	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_37840652_37841027_37841106_37841781_37841906_37846316_37846359_37847480
H1_mix_00090003	chrX	-	2372	5	FSM	ENSG00000165169.11	ENST00000432389.2	719	5	54	-1707	54	0	multi-exon	FALSE	canonical	3	15	junction_4	37.7392368762274	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGCTTCTGGATAATCA	268	False	NA	0	True	AATAAA	-21	NA	37847354	37838835	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_37840652_37841027_37841106_37841781_37841906_37846316_37846359_37847042
H1_mix_00090004	chrX	-	1846	10	FSM	ENSG00000101955.15	ENST00000378533.4	1846	10	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	8.90415355984408	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTAGAACTCACTTTGT	-2	True	NA	0	True	AATAAA	-21	NA	38220871	38149338	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_38149895_38154461_38154584_38156895_38157030_38160016_38160197_38160932_38161055_38164768_38164896_38171880_38172058_38174159_38174352_38178284_38178345_38220695
H1_mix_00090005	chrX	-	1777	9	FSM	ENSG00000101955.15	ENST00000538295.5	1780	9	0	3	0	0	multi-exon	FALSE	canonical	3	6	junction_1	16.5378354085412	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTAGAACTCACTTTGT	NA	False	NA	0	True	AATAAA	-21	NA	38220924	38149338	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_38149895_38156895_38157030_38160016_38160197_38160932_38161055_38164768_38164896_38171880_38172058_38174159_38174352_38178284_38178345_38220695
H1_mix_00090006	chrX	-	3053	19	FSM	ENSG00000156313.15	ENST00000642395.2	3053	19	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_17	9.85199108784928	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTGATAAGTATTAATAAA	-1	True	NA	NA	False	AATAAA	-27	NA	38327509	38269162	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_38269833_38273385_38273478_38275088_38275147_38276586_38276773_38287093_38287246_38287860_38288042_38290958_38291025_38291392_38291485_38297283_38297453_38298955_38299142_38301246_38301372_38304634_38304791_38310614_38310774_38317315_38317466_38318828_38318988_38321026_38321090_38322852_38322946_38323398_38323525_38327339
H1_mix_00090007	chrX	-	2522	17	NIC	ENSG00000156313.15	novel	2819	20	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	14.4068939660844	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAATAAGATATTTCCTA	11	True	NA	NA	False	AATAAA	-25	NA	38327497	38269348	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_38269833_38273385_38273478_38275088_38275147_38276586_38276773_38290958_38291025_38291392_38291485_38297283_38297453_38298955_38299142_38301246_38301372_38304634_38304791_38310614_38310774_38317315_38317466_38318828_38318988_38321026_38321090_38322852_38322946_38323398_38323525_38327339
H1_mix_00090008	chrX	-	1005	1	FSM	ENSG00000228232.1	ENST00000452570.1	1005	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCCTGGACCACCAGCCC	75	False	NA	NA	False	NA	NA	NA	39788136	39787131	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_39787100_39788100
H1_mix_00090009	chrX	-	6258	15	FSM	ENSG00000183337.18	ENST00000397354.7	6258	15	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_14	34.6708281777435	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCTTGTGTCCCATGTAT	578	False	NA	-2	True	AATAAA	-27	NA	40097403	40051245	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_40052401_40053885_40054043_40054255_40054334_40055367_40055514_40057154_40057322_40062138_40062394_40062745_40063072_40063607_40063851_40064335_40064600_40070972_40071160_40071636_40071691_40072348_40075181_40076453_40076533_40077843_40077970_40097214
H1_mix_00090010	chrX	-	6314	14	FSM	ENSG00000183337.18	ENST00000378455.8	6338	14	24	0	24	0	multi-exon	FALSE	canonical	2	7	junction_13	54.3357957356369	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCTTGTGTCCCATGTAT	NA	False	NA	-2	True	AATAAA	-27	NA	40177305	40051245	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_40052401_40053885_40054043_40054255_40054334_40055367_40055514_40057154_40057322_40062138_40062394_40062745_40063072_40063607_40063851_40064335_40064600_40070972_40071160_40072348_40075181_40076453_40076533_40077843_40077970_40177006
H1_mix_00090011	chrX	-	6915	15	FSM	ENSG00000183337.18	ENST00000378444.9	6910	15	0	-5	0	0	multi-exon	FALSE	canonical	3	59	junction_8	39.6883908384673	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCTTGTGTCCCATGTAT	0	True	NA	-2	True	AATAAA	-27	NA	40097958	40051245	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_40052401_40053885_40054043_40054255_40054334_40055367_40055514_40057154_40057322_40062138_40062394_40062745_40063072_40063607_40063953_40064335_40064600_40070972_40071160_40071636_40071691_40072348_40075181_40076453_40076533_40077843_40077970_40097214
H1_mix_00090012	chrX	-	6246	15	NIC	ENSG00000183337.18	novel	6258	15	NA	NA	56	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	49.8747922096843	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTACCTTGTGTCCCAT	634	False	NA	-6	True	AATAAA	-23	NA	40097347	40051249	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_40052401_40053837_40054043_40054255_40054334_40055367_40055514_40057154_40057322_40062138_40062394_40062745_40063072_40063607_40063851_40064335_40064600_40070972_40071160_40071636_40071691_40072348_40075181_40076453_40076533_40077843_40077970_40097214
H1_mix_00090016	chrX	-	4247	7	FSM	ENSG00000185753.13	ENST00000327877.10	4244	7	0	-3	0	3	multi-exon	FALSE	canonical	3	41	junction_2	7.9320026895272	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTGTCGCATTTCCTGG	-18	True	NA	5	True	AATAAA	-23	NA	40647561	40626917	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_40630163_40630613_40630774_40636532_40636713_40637006_40637157_40639008_40639129_40647006_40647142_40647304
H1_mix_00090017	chrX	-	571	4	FSM	ENSG00000180182.11	ENST00000416199.5	557	4	0	-14	0	14	multi-exon	FALSE	canonical	3	33	junction_1	211.027644318622	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAATTTTGATGAAGATGT	NA	False	NA	1	True	AATAAA	-41	NA	40659334	40649528	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_40649673_40654363_40654557_40654934_40655061_40659226
H1_mix_00090018	chrX	-	7389	28	ISM	ENSG00000180182.11	ENST00000324817.6	7996	31	19737	1224	-754	14	3prime_fragment	FALSE	canonical	3	272	junction_23	56.2329321766142	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAATTTTGATGAAGATGT	NA	False	NA	1	True	AATAAA	-41	NA	40715805	40649528	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_40651880_40654363_40654557_40654934_40655061_40659226_40659335_40659427_40659608_40662924_40663161_40664306_40664490_40666719_40666852_40671860_40671973_40675220_40675362_40679863_40680134_40680757_40680911_40681851_40681944_40682602_40682750_40682835_40682997_40688453_40688531_40692182_40692318_40692707_40692903_40697023_40697184_40701164_40701244_40703443_40703570_40709347_40709460_40709978_40710130_40711168_40711302_40712185_40712294_40712913_40713043_40713777_40713908_40714536
H1_mix_00090019	chrX	-	8008	31	FSM	ENSG00000180182.11	ENST00000324817.6	7996	31	0	-12	0	12	multi-exon	FALSE	canonical	3	192	junction_30	75.487452967732	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGAGTTGACAATCCCAG	-12	True	NA	NA	False	ATTAAA	-28	NA	40735542	40648292	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_40651880_40654363_40654557_40654934_40655061_40659226_40659335_40659427_40659608_40662924_40663161_40664306_40664490_40666719_40666852_40671860_40671973_40675220_40675362_40679863_40680134_40680757_40680911_40681851_40681944_40682602_40682750_40682835_40682997_40688453_40688531_40692182_40692318_40692707_40692903_40697023_40697184_40701164_40701244_40703443_40703570_40709347_40709460_40709978_40710130_40711168_40711302_40712185_40712294_40712913_40713043_40713777_40713908_40714536_40714711_40726745_40726852_40729318_40729346_40735197
H1_mix_00090020	chrX	-	6445	31	NNC	ENSG00000180182.11	novel	7996	31	NA	NA	-24	7	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_30	93.0090796045681	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCTAGTTAATTTTGATG	-1	True	NA	-6	True	AATAAA	-34	NA	40735882	40649535	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_40651880_40654363_40654557_40654934_40655061_40659226_40659335_40659427_40659608_40662924_40663161_40664306_40664490_40666719_40666852_40671860_40671973_40675220_40675362_40679863_40680134_40680757_40680911_40681851_40681944_40682602_40682750_40682835_40682997_40688453_40688531_40692182_40692318_40692707_40692903_40697023_40697184_40701164_40701244_40703443_40703570_40709347_40709460_40709978_40710130_40711168_40711302_40712185_40712294_40712913_40713043_40713777_40713908_40714536_40714711_40726745_40726852_40729318_40729346_40735857
H1_mix_00090023	chrX	-	927	1	FSM	ENSG00000216866.5	ENST00000397318.4	883	1	0	-44	0	44	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	AATAAA	-22	NA	40935864	40934937	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_40934900_40935900
H1_mix_00090024	chrX	-	8224	25	FSM	ENSG00000147044.23	ENST00000421587.8	8220	25	0	-4	0	4	multi-exon	FALSE	canonical	3	15	junction_23	74.9649455115893	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCTCCTCAGATTGCAG	623	False	NA	1	True	AATAAA	-23	NA	41923010	41514929	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_41520597_41523950_41524035_41531006_41531210_41534705_41534787_41534892_41534974_41542690_41542807_41553718_41553916_41555599_41555636_41559778_41559848_41561558_41561645_41569667_41569747_41578339_41578529_41586906_41586988_41589514_41589593_41609903_41610026_41626603_41626704_41636577_41636662_41660438_41660562_41665276_41665453_41671427_41671531_41739383_41739457_41745523_41745602_41787177_41787284_41853096_41853228_41922929
H1_mix_00090025	chrX	-	8365	25	FSM	ENSG00000147044.23	ENST00000644347.1	8361	25	0	-4	0	4	multi-exon	FALSE	canonical	3	49	junction_8	54.8747152612203	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCTCCTCAGATTGCAG	464	False	NA	1	True	AATAAA	-23	NA	41923169	41514929	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_41520597_41523950_41524035_41531006_41531210_41534705_41534787_41534892_41534974_41542690_41542807_41553718_41553916_41555599_41555636_41559778_41559848_41561558_41561645_41569667_41569747_41578339_41578529_41586906_41586988_41589514_41589593_41609903_41610026_41626603_41626704_41636577_41636662_41660438_41660562_41665276_41665453_41671427_41671531_41739383_41739457_41745523_41745602_41787177_41787284_41853114_41853228_41922929
H1_mix_00090026	chrX	-	8426	26	FSM	ENSG00000147044.23	ENST00000644219.1	6048	26	0	-2378	0	4	multi-exon	FALSE	canonical	3	173	junction_8	36.4082188523416	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCTCCTCAGATTGCAG	472	False	NA	1	True	AATAAA	-23	NA	41923161	41514929	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_41520597_41523950_41524035_41531006_41531210_41534705_41534787_41534892_41534974_41542690_41542807_41553718_41553916_41555599_41555636_41557031_41557101_41559778_41559848_41561558_41561645_41569667_41569747_41578339_41578529_41586906_41586988_41589514_41589593_41609903_41610026_41626603_41626704_41636577_41636662_41660438_41660562_41665276_41665453_41671427_41671531_41739383_41739457_41745523_41745602_41787177_41787284_41853114_41853228_41922929
H1_mix_00090027	chrX	-	3754	25	FSM	ENSG00000147044.23	ENST00000378158.6	3754	25	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_7	45.5686105108428	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTAGTGAAATGTGTTT	489	False	NA	-24	True	TATAAA	-31	NA	41923144	41519548	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_41520597_41523950_41524035_41531006_41531210_41534705_41534787_41534892_41534974_41542690_41542807_41553718_41553916_41557031_41557101_41559778_41559848_41561558_41561645_41569667_41569747_41578339_41578529_41586906_41586988_41589514_41589593_41609903_41610026_41626603_41626704_41636577_41636662_41660438_41660562_41665276_41665453_41671427_41671531_41739383_41739457_41745523_41745602_41787177_41787284_41853114_41853228_41922929
H1_mix_00090028	chrX	-	1276	10	FSM	ENSG00000147044.23	ENST00000643853.1	3976	10	0	2700	0	-2700	multi-exon	FALSE	canonical	3	242	junction_7	25.4432314121331	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTCACTGGAACTGTTT	NA	False	NA	NA	False	NA	NA	NA	41745593	41586640	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_41586988_41589514_41589593_41609903_41610026_41626603_41626704_41636577_41636662_41660438_41660562_41665276_41665453_41671427_41671531_41739383_41739457_41745523
H1_mix_00090029	chrX	-	865	1	FSM	ENSG00000217624.2	ENST00000405276.2	735	1	-19	-111	-19	111	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTCTATTTGAATTTCT	NA	False	NA	NA	False	NA	NA	NA	41676513	41675648	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_41675600_41676500
H1_mix_00090030	chrX	-	560	5	FSM	ENSG00000147044.23	ENST00000644770.1	564	5	0	4	0	-4	multi-exon	FALSE	canonical	3	14	junction_1	109.355784026269	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTCGCTGTGTTTTTGT	621	False	NA	-4	True	AATAAA	-15	NA	41923012	41743556	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_41743737_41745523_41745602_41787177_41787284_41853114_41853228_41922929
H1_mix_00090031	chrX	-	420	1	FSM	ENSG00000228847.1	ENST00000442175.1	420	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGGAGCCATCTCCACCT	57	False	NA	NA	False	NA	NA	NA	42099173	42098753	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_42098800_42099200
H1_mix_00090032	chrX	-	2581	15	FSM	ENSG00000069535.14	ENST00000378069.5	2570	15	-11	0	-11	0	multi-exon	FALSE	canonical	2	4	junction_1	2.50305935256218	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTGTCCTTTCTTTTTG	50	False	NA	NA	False	AATAAA	-16	NA	43882461	43766609	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_43767619_43768653_43768717_43769306_43769419_43775174_43775273_43778681_43778740_43780341_43780396_43781447_43781545_43793418_43793579_43795738_43795889_43797124_43797267_43802171_43802264_43803299_43803405_43838867_43839006_43843669_43843765_43882253
H1_mix_00090033	chrX	-	3504	15	FSM	ENSG00000183690.13	ENST00000420999.2	3257	15	-125	-122	-125	122	multi-exon	TRUE	non_canonical	2	12	junction_10	4.1057451037714	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTCAGGGACTACCCTG	NA	False	NA	NA	False	AAAAAG	-15	NA	44343797	44147749	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_44148897_44163921_44164028_44176291_44176385_44178366_44178565_44229648_44229780_44232480_44232678_44235304_44235448_44242120_44242290_44248271_44248411_44248802_44248917_44250193_44250446_44261074_44261299_44272685_44272837_44312567_44312757_44343546
H1_mix_00090034	chrX	-	1118	1	FSM	ENSG00000214018.3	ENST00000426279.1	1163	1	70	-25	70	25	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGATTTTTTTCCATCTC	3917	False	NA	NA	False	AATGAA	-21	NA	44310406	44309288	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_44309300_44310400
H1_mix_00090035	chrX	-	2324	4	FSM	ENSG00000069509.6	ENST00000483115.1	1069	4	-494	-761	61	628	multi-exon	FALSE	canonical	3	212	junction_2	24.7790233867277	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTCATTACCAAGAGGCCA	201	False	NA	NA	False	NA	NA	NA	44542798	44523010	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_44524276_44527236_44527366_44538466_44538543_44541944
H1_mix_00090036	chrX	-	1071	5	FSM	ENSG00000069509.6	ENST00000378045.5	1054	5	0	-17	0	17	multi-exon	FALSE	canonical	3	194	junction_4	31.4195400984801	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTCCTGGAGTTATT	-8	True	NA	13	True	ATTAAA	-41	NA	44542859	44523621	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_44524276_44527236_44527366_44538466_44538543_44541944_44542102_44542804
H1_mix_00090037	chrX	-	1269	5	NNC	ENSG00000069509.6	novel	1054	5	NA	NA	57	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_4	95.5389318550297	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTAAGGCTGACTTTTT	4	True	NA	39	True	TTTAAA	-18	NA	44542802	44523771	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_44524276_44527236_44527366_44538466_44538543_44541944_44542102_44542399
H1_mix_00090038	chrX	-	1037	1	FSM	ENSG00000270069.2	ENST00000688264.1	970	1	-69	2	-69	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTACTGTTCTCTGTGTG	7737	False	NA	-3	True	AATAAA	-26	NA	45746249	45745212	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_45745200_45746200
H1_mix_00090039	chrX	-	324	1	FSM	ENSG00000269902.1	ENST00000602277.1	528	1	-68	272	-68	-272	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCATTCAGGAGGGGAAA	5897	False	NA	NA	False	AATAGA	-3	NA	45765367	45765043	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_45765000_45765400
H1_mix_00090040	chrX	-	1458	3	FSM	ENSG00000231566.3	ENST00000456532.2	1458	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	2	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAACACTTACCAGTAGAA	3	True	NA	NA	False	AAAAAG	-13	NA	45851541	45847041	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_45848214_45849374_45849473_45851353
H1_mix_00090041	chrX	-	636	2	FSM	ENSG00000231566.3	ENST00000666464.2	692	2	10	46	10	-46	multi-exon	FALSE	canonical	3	11	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACCTGCATGAACCAAT	19	True	NA	NA	False	NA	NA	NA	45851525	45849008	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_45849473_45851353
H1_mix_00090042	chrX	-	706	2	FSM	ENSG00000236751.3	ENST00000446884.2	997	2	188	103	183	-103	multi-exon	FALSE	canonical	2	3	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGAGTAGTGATTGTGGG	224	False	NA	NA	False	NA	NA	NA	46327445	46325890	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_46326455_46327303
H1_mix_00090043	chrX	-	916	1	FSM	ENSG00000235587.2	ENST00000425487.2	1006	1	91	-1	91	1	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGACTCCTGGACCACCAAC	161	False	NA	NA	False	NA	NA	NA	46440623	46439707	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_46439700_46440600
H1_mix_00090045	chrX	-	589	6	FSM	ENSG00000251192.8	ENST00000522017.5	591	6	78	-76	41	69	multi-exon	FALSE	canonical	1	2	junction_1	4.70744091837593	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTTTGTTAGAGCTTCT	26	True	NA	NA	False	NA	NA	NA	46545379	46522923	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_46523126_46528349_46528446_46528782_46528910_46542072_46542117_46544500_46544612_46545370
H1_mix_00090046	chrX	-	535	6	FSM	ENSG00000251192.8	ENST00000521626.5	576	6	41	0	41	0	multi-exon	FALSE	canonical	1	1	junction_1	4.97995983919549	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATGGCATCCTCCTACC	26	True	NA	NA	False	NA	NA	NA	46545379	46522992	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_46523126_46528334_46528446_46528782_46528910_46542072_46542117_46544500_46544612_46545370
H1_mix_00090047	chrX	-	9971	17	FSM	ENSG00000065923.10	ENST00000616978.5	9971	17	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_9	7.11045664848609	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGCTCATTCATTTGCTT	17	True	NA	-20	True	AATAAA	-16	NA	46759118	46599250	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_46607204_46613288_46613395_46620976_46621060_46631585_46631650_46635588_46635649_46643235_46643390_46648685_46648798_46651109_46651224_46651315_46651405_46653608_46653715_46662015_46662158_46662537_46662644_46669606_46669720_46672550_46672628_46679677_46679756_46682335_46682536_46758704
H1_mix_00090048	chrX	-	2424	18	NIC	ENSG00000065923.10	novel	9971	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	10.3753100591515	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAAATAGTGTTATACTCT	17	True	NA	-3	True	CATAAA	-30	NA	46759118	46606260	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_46606371_46606907_46607204_46613288_46613395_46620976_46621060_46631585_46631650_46635588_46635649_46643235_46643390_46648685_46648798_46651109_46651224_46651315_46651405_46653608_46653715_46662015_46662158_46662537_46662644_46669606_46669720_46672550_46672628_46679677_46679756_46682335_46682536_46758704
H1_mix_00090049	chrX	-	601	3	FSM	ENSG00000147123.12	ENST00000377811.4	586	3	0	-15	0	15	multi-exon	FALSE	canonical	3	1685	junction_1	289.5	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTGTGAAGGGGATATG	1	True	NA	9	True	ATTAAA	-32	NA	47144702	47142200	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_47142441_47142613_47142745_47144472
H1_mix_00090050	chrX	-	952	3	FSM	ENSG00000147123.12	ENST00000687244.1	1525	3	428	145	-328	0	multi-exon	FALSE	canonical	3	681	junction_1	791.5	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGCTAGTGTTGATTGTGT	455	False	NA	-6	True	ATTAAA	-17	NA	47145038	47142215	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_47142441_47142583_47142745_47144472
H1_mix_00090051	chrX	-	5385	5	FSM	ENSG00000147124.13	ENST00000313116.11	4297	5	0	-1088	0	387	multi-exon	FALSE	canonical	3	9	junction_4	8.61321658847611	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTCTTTTATGTTTTTG	-15	True	NA	74	True	NA	NA	NA	47482585	47444790	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_47449475_47455920_47456017_47456271_47456399_47467409_47467761_47482458
H1_mix_00090052	chrX	-	3599	5	NIC	ENSG00000147124.13	novel	4297	5	NA	NA	19	-765	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	12.3364297914753	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTATAAGAAGTATGCATGC	4	True	NA	NA	False	NA	NA	NA	47482566	47446643	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_47449475_47455920_47456017_47456271_47456399_47467323_47467761_47482458
H1_mix_00090053	chrX	-	3153	1	FSM	ENSG00000235636.1	ENST00000446295.1	882	1	-116	-2155	-116	2155	mono-exon	FALSE	NA	NA	NA	NA	NA	620	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATTCCTGCCACAAGCA	263	False	NA	NA	False	NA	NA	NA	47513599	47510446	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_47510400_47513600
H1_mix_00090054	chrX	-	3176	13	FSM	ENSG00000008056.14	ENST00000340666.5	3172	13	0	-4	0	4	multi-exon	FALSE	canonical	3	58	junction_1	7.72801541291309	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGCTTCTTGGTGAAGA	3	True	NA	3	True	AATAAA	-22	NA	47619857	47571896	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_47572962_47574001_47574591_47574687_47574776_47575127_47575275_47576130_47576234_47576331_47576407_47576497_47576641_47577438_47577502_47604977_47605068_47605222_47605380_47606944_47607037_47607140_47607199_47619351
H1_mix_00090055	chrX	-	3214	13	FSM	ENSG00000008056.14	ENST00000295987.13	3210	13	0	-4	0	4	multi-exon	FALSE	canonical	3	22	junction_1	15.2552358953319	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGCTTCTTGGTGAAGA	3	True	NA	3	True	AATAAA	-22	NA	47619857	47571896	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_47573000_47574001_47574591_47574687_47574776_47575127_47575275_47576130_47576234_47576331_47576407_47576497_47576641_47577438_47577502_47604977_47605068_47605222_47605380_47606944_47607037_47607140_47607199_47619351
H1_mix_00090056	chrX	-	2229	9	FSM	ENSG00000126759.14	ENST00000396992.8	2489	9	0	260	0	-260	multi-exon	FALSE	canonical	1	6	junction_3	3.45506874027131	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTTGTTCATTCATTCA	-38	True	NA	NA	False	NA	NA	NA	47629930	47623541	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_47624441_47626057_47626170_47626327_47626520_47626772_47626947_47627140_47627333_47627470_47627642_47628101_47628278_47629523_47629675_47629768
H1_mix_00090057	chrX	-	2695	6	FSM	ENSG00000126767.18	ENST00000247161.7	2695	6	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_5	19.6102014268084	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGAGGCTGCTGGCACT	8670	False	NA	-6	True	AATATA	-16	NA	47650488	47635520	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_47636928_47637012_47637115_47637750_47638183_47638894_47639339_47641231_47641476_47650422
H1_mix_00090058	chrX	-	2914	7	FSM	ENSG00000126767.18	ENST00000376983.8	2876	7	-38	0	3	0	multi-exon	FALSE	canonical	3	58	junction_6	53.7300350517908	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGAGGCTGCTGGCACT	1	True	NA	-6	True	AATATA	-16	NA	47650601	47635520	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_47636928_47637012_47637115_47637750_47638183_47638894_47639339_47641231_47641476_47649920_47650027_47650422
H1_mix_00090059	chrX	-	574	7	FSM	ENSG00000126756.12	ENST00000333119.7	574	7	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_6	71.746467199128	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCACATGGCCCTTCTTT	-3	True	NA	-6	True	ATTAAA	-17	NA	47659161	47651797	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_47651896_47652080_47652145_47657182_47657291_47657571_47657640_47657781_47657864_47658829_47658937_47659114
H1_mix_00090060	chrX	-	791	6	FSM	ENSG00000126756.12	ENST00000335890.3	773	6	1	-19	1	19	multi-exon	FALSE	canonical	3	471	junction_1	37.1892457573423	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCATAAACCCTGCTAGT	-21	True	NA	15	True	ATTAAA	-38	NA	47659179	47651776	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_47651896_47652080_47652145_47657182_47657291_47657571_47657640_47657781_47657864_47658829
H1_mix_00090061	chrX	-	3694	5	ISM	ENSG00000147118.12	ENST00000376943.8	3499	6	11	0	0	0	intron_retention	TRUE	canonical	3	33	junction_3	11.5406888875838	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTACTGTTATAGT	3	True	NA	-1	True	AATAAA	-16	NA	48003978	47974850	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_47977798_47982948_47983039_47983284_47983412_48002594_48002654_48003507
H1_mix_00090062	chrX	-	3582	7	NIC	ENSG00000147118.12	novel	3586	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_6	15.283433296656	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTACTGTTATAGT	3	True	NA	-1	True	AATAAA	-16	NA	48003978	47974850	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_47977798_47982948_47983039_47983284_47983412_47988523_47988618_48002594_48002654_48003507_48003703_48003908
H1_mix_00090063	chrX	-	3587	7	FSM	ENSG00000147118.12	ENST00000396965.5	3586	7	0	-1	0	0	multi-exon	FALSE	canonical	3	11	junction_6	18.1444818670091	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTACTGTTATAGT	3	True	NA	-1	True	AATAAA	-16	NA	48003978	47974850	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_47977798_47982948_47983039_47983284_47983412_47988523_47988618_48002594_48002654_48003507_48003703_48003903
H1_mix_00090065	chrX	-	4949	5	FSM	ENSG00000221994.12	ENST00000276054.9	3475	5	-2	-1472	-2	1472	multi-exon	FALSE	canonical	3	8	junction_3	1.92028643696715	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTTTATGGTATCTTTG	-2	True	NA	NA	False	AATAAA	-25	NA	48071642	48056043	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48060204_48060449_48060546_48060818_48060946_48066871_48067062_48071266
H1_mix_00090066	chrX	-	2455	5	FSM	ENSG00000221994.12	ENST00000409324.7	2455	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	2.1650635094611	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTGTTGTTTGGTCAT	524	False	NA	0	True	AATAAA	-24	NA	48071116	48058213	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48060204_48060449_48060546_48060818_48060946_48066871_48067062_48071064
H1_mix_00090067	chrX	-	2083	16	FSM	ENSG00000017483.16	ENST00000595796.5	2659	16	569	7	-51	0	multi-exon	FALSE	canonical	3	238	junction_15	28.7538210021246	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGACTCAGCCTTCTGA	662	False	NA	-12	True	AATAAA	-16	NA	48469608	48458543	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48459035_48459535_48459640_48459731_48459877_48460648_48460765_48460985_48461087_48461717_48461798_48462006_48462145_48462232_48462292_48462897_48462981_48466014_48466094_48466229_48466323_48466798_48466873_48466961_48467078_48467709_48467786_48467871_48467926_48469334
H1_mix_00090068	chrX	-	708	8	FSM	ENSG00000017483.16	ENST00000416711.5	708	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_7	105.966109329967	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGAGGCTCCCTGGGTTG	1253	False	NA	NA	False	NA	NA	NA	48469017	48462897	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48462981_48466014_48466094_48466229_48466323_48466798_48466873_48466961_48467078_48467709_48467786_48467871_48467926_48468884
H1_mix_00090069	chrX	-	563	2	FSM	ENSG00000224292.1	ENST00000445586.1	653	2	20	70	20	-70	multi-exon	FALSE	canonical	1	1	junction_1	0	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTAGGTTGTGGTTTCTGG	NA	False	NA	NA	False	AATAAA	-13	NA	48508818	48506592	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48507056_48508718
H1_mix_00090071	chrX	-	1029	3	FSM	ENSG00000102109.9	ENST00000218230.6	1025	3	0	-4	0	4	multi-exon	FALSE	canonical	3	49	junction_2	31	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTTGTCTGTGTGAGTG	-22	True	NA	-4	True	AATAAA	-19	NA	48835610	48831091	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48831456_48831868_48832342_48835418
H1_mix_00090073	chrX	-	1023	8	NNC	ENSG00000126768.12	novel	964	7	NA	NA	0	28510	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	436.806546635548	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGCTGGGCACAGTGGCT	0	True	NA	NA	False	AAAAAG	-13	NA	48897790	48864936	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_48864968_48893446_48893818_48893899_48894011_48894096_48894226_48895037_48895102_48895351_48895502_48896758_48896859_48897723
H1_mix_00090074	chrX	-	712	5	NIC	ENSG00000126768.12	novel	964	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	43	junction_4	397.31811876631	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGGACTCCTTGAAC	5	True	NA	-3	True	TTTAAA	-18	NA	48897762	48893448	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_48893818_48893899_48894011_48894096_48894226_48895037_48895102_48897723
H1_mix_00090075	chrX	-	814	6	ISM	ENSG00000126768.12	ENST00000376582.7	950	7	381	0	0	0	3prime_fragment	FALSE	canonical	3	881	junction_5	44.62017480916	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGACTCCTTGAACTG	5	True	NA	-1	True	TTTAAA	-20	NA	48897762	48893446	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_48893818_48893899_48894011_48894096_48894226_48895037_48895102_48896758_48896859_48897723
H1_mix_00090076	chrX	-	987	7	FSM	ENSG00000126768.12	ENST00000465150.6	964	7	0	-23	0	23	multi-exon	FALSE	canonical	3	78	junction_5	401.362851904469	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGGCCCCTCCTTAGGAT	5	True	NA	22	True	TTTAAA	-43	NA	48897762	48893423	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48893818_48893899_48894011_48894096_48894226_48895037_48895102_48895351_48895502_48896758_48896859_48897723
H1_mix_00090077	chrX	-	1456	5	FSM	ENSG00000102100.16	ENST00000247138.11	1456	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	59.3143110893147	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACTTGGGTTGGGCAGCCT	0	True	NA	-4	True	AATAAA	-19	NA	48911646	48903182	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48903466_48904745_48905483_48906391_48906544_48909813_48909997_48911545
H1_mix_00090078	chrX	-	3048	4	FSM	ENSG00000102100.16	ENST00000376521.6	3047	4	0	-1	0	0	multi-exon	FALSE	canonical	3	115	junction_1	20.0166597280032	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACTTGGGTTGGGCAGCCT	7586	False	NA	-4	True	AATAAA	-19	NA	48911958	48903182	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48905483_48906391_48906544_48909813_48909997_48911545
H1_mix_00090079	chrX	-	2028	4	FSM	ENSG00000102100.16	ENST00000445167.7	1739	4	-289	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	59.4100627466051	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCACGTGTAGCTTTCTGA	7586	False	NA	-1	True	AATAAA	-18	NA	48911958	48903612	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48904893_48906391_48906544_48909813_48909997_48911545
H1_mix_00090080	chrX	-	3479	3	FSM	ENSG00000102100.16	ENST00000376512.2	903	3	-233	-2343	27	0	multi-exon	FALSE	canonical	3	138	junction_2	13	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCACGTGTAGCTTTCTGA	7634	False	NA	-1	True	AATAAA	-18	NA	48911910	48903612	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48906544_48909813_48909997_48911545
H1_mix_00090081	chrX	-	2075	6	FSM	ENSG00000102096.9	ENST00000376509.4	2075	6	0	0	0	0	multi-exon	FALSE	canonical	3	1093	junction_1	94.5993657484023	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCTGGCCATTTGTAGGT	-1	True	NA	-16	True	AATAAA	-17	NA	48919024	48913181	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48914295_48914394_48914572_48915019_48915393_48917780_48917832_48918535_48918646_48918773
H1_mix_00090082	chrX	-	2888	9	FSM	ENSG00000068308.15	ENST00000376488.8	2888	9	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_7	38.3745928317161	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGTCTTTGCCTGCTGA	-15	True	NA	0	True	ATTAAA	-31	NA	48957607	48922023	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48923296_48923632_48923747_48923850_48924053_48925846_48926051_48934463_48934613_48934710_48934868_48934953_48935019_48944189_48944284_48956976
H1_mix_00090083	chrX	-	2686	10	FSM	ENSG00000068308.15	ENST00000396743.7	2682	10	0	-4	0	0	multi-exon	FALSE	canonical	3	45	junction_1	102.12241504352	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGTCTTTGCCTGCTGA	-39	True	NA	0	True	ATTAAA	-31	NA	48957631	48922023	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48922911_48923136_48923296_48923632_48923747_48923850_48924053_48925846_48926051_48934463_48934613_48934710_48934868_48934953_48935019_48944189_48944284_48956976
H1_mix_00090084	chrX	-	2077	10	FSM	ENSG00000068308.15	ENST00000455452.5	2077	10	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_6	135.773504206249	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGACTCTGTTCTGTGTGGG	1191	False	NA	-1	True	AATAAA	-22	NA	48957189	48922205	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48922911_48923136_48923296_48923632_48923747_48923850_48924053_48925846_48926051_48934463_48934613_48934695_48934868_48934953_48935019_48944189_48944284_48956976
H1_mix_00090085	chrX	-	2713	9	NNC	ENSG00000068308.15	novel	2888	9	NA	NA	-36	-74	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_1	103.230022280342	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTCTCTCTCATTGCCGC	NA	False	NA	NA	False	NA	NA	NA	48958422	48923016	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_48923299_48923632_48923747_48923850_48924053_48925846_48926051_48934463_48934613_48934710_48934868_48934953_48935019_48944189_48944284_48956976
H1_mix_00090086	chrX	-	618	1	FSM	ENSG00000223309.1	ENST00000411377.1	104	1	5	-519	5	519	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	48959277	48958659	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48958700_48959300
H1_mix_00090087	chrX	-	5095	6	FSM	ENSG00000102057.10	ENST00000218176.4	4718	6	0	-377	0	375	multi-exon	FALSE	canonical	3	26	junction_2	6.5299310869258	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGTTTGGTGAATTTC	5	True	NA	-25	True	AATAAA	-6	NA	48971844	48961002	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48962807_48966054_48966306_48966577_48966677_48966760_48966845_48966943_48967107_48969150
H1_mix_00090088	chrX	-	2829	12	FSM	ENSG00000068400.13	ENST00000619149.4	2828	12	0	-1	0	1	multi-exon	FALSE	canonical	3	282	junction_9	27.0790089787778	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTCTCGTTCTTTTC	NA	False	NA	-2	True	NA	NA	NA	48987817	48973718	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48974286_48975154_48976364_48978304_48978436_48981214_48981315_48981415_48981473_48981595_48981692_48981794_48981873_48982978_48983093_48983227_48983441_48983774_48983871_48985267_48985403_48987784
H1_mix_00090089	chrX	-	3034	26	FSM	ENSG00000068400.13	ENST00000376423.8	3031	26	0	-3	0	0	multi-exon	TRUE	canonical	3	229	junction_16	30.8562084514608	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTCGTCTCGTTCTTTT	-2	True	NA	-3	True	NA	NA	NA	49002264	48973719	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48974286_48975154_48975310_48976017_48976112_48976240_48976364_48978304_48978436_48981214_48981315_48981415_48981473_48981595_48981692_48981794_48981873_48982978_48983093_48983227_48983441_48983774_48983871_48985267_48985403_48987784_48987878_48988120_48988199_48989610_48989711_48989834_48989883_48989971_48990004_48990684_48990733_48990925_48991111_48993427_48993579_48997249_48997358_48998153_48998181_48999237_48999300_48999437_48999505_49002187
H1_mix_00090090	chrX	-	2885	24	FSM	ENSG00000068400.13	ENST00000622599.4	2881	24	0	-4	0	1	multi-exon	FALSE	canonical	3	9	junction_21	68.4600527897643	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTCTCGTTCTTTTC	13	False	NA	-2	True	NA	NA	NA	49002249	48973718	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48974286_48975154_48975310_48976017_48976112_48976240_48976364_48978304_48978436_48981214_48981315_48981415_48981473_48981595_48981692_48981794_48981873_48982978_48983093_48983227_48983441_48983774_48983871_48985267_48985403_48987784_48987878_48988120_48988199_48989610_48989711_48989834_48989883_48989971_48990004_48990684_48990733_48990925_48991111_48993427_48993579_48999237_48999300_48999437_48999505_49002187
H1_mix_00090095	chrX	-	3306	10	FSM	ENSG00000068323.17	ENST00000315869.8	3291	10	0	-15	0	15	multi-exon	TRUE	canonical	3	140	junction_8	41.0016560942255	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTACACTGTGCAGTGAA	-3	True	NA	14	True	NA	NA	NA	49043357	49028710	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_49030602_49031396_49031545_49033464_49033541_49033725_49033783_49034133_49034252_49038009_49038115_49038196_49038443_49039106_49039411_49040454_49040569_49043110
H1_mix_00090096	chrX	-	3294	10	FSM	ENSG00000068323.17	ENST00000493583.5	3279	10	0	-15	0	15	multi-exon	FALSE	canonical	3	69	junction_8	59.5223788187847	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTACACTGTGCAGTGAA	104	False	NA	14	True	NA	NA	NA	49043410	49028710	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_49030602_49031396_49031545_49033464_49033541_49033725_49033783_49034133_49034252_49038009_49038115_49038196_49038443_49039106_49039346_49040454_49040569_49043110
H1_mix_00090097	chrX	-	1260	3	FSM	ENSG00000243279.4	ENST00000553851.3	1260	3	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	2	322	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGCCTCCTGGGTAAAG	4	True	NA	-4	True	AATAAA	-24	NA	49074002	49071160	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_49072009_49072432_49072651_49073808
H1_mix_00090099	chrX	-	1607	11	FSM	ENSG00000196998.19	ENST00000376372.9	1598	11	0	-9	0	0	multi-exon	FALSE	canonical	3	132	junction_7	27.0784046797443	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTCAGGGGCGGGGCAT	11	True	NA	-7	True	AATAAA	-25	NA	49079887	49074432	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_49074913_49075135_49075282_49075363_49075466_49075544_49075754_49075865_49075946_49076429_49076525_49076644_49076751_49077642_49077748_49077836_49077912_49078040_49078113_49079750
H1_mix_00090100	chrX	-	1007	8	FSM	ENSG00000196998.19	ENST00000367375.8	996	8	0	-11	0	0	multi-exon	FALSE	canonical	3	18	junction_4	63.3938128700592	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTCACTTCCCCCCAGC	2343	False	NA	-20	True	GGGGCT	-40	NA	49077746	49074657	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_49074913_49075135_49075282_49075363_49075466_49075544_49075664_49075865_49075946_49076429_49076525_49076644_49076751_49077642
H1_mix_00090101	chrX	-	1301	10	FSM	ENSG00000196998.19	ENST00000485908.6	1301	10	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_7	44.1134900002256	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTCACTTCCCCCCAGC	-13	True	NA	-20	True	GGGGCT	-40	NA	49079911	49074657	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_49074913_49075135_49075282_49075363_49075466_49075544_49075754_49075865_49075946_49076429_49076525_49076644_49076751_49077836_49077912_49078040_49078113_49079750
H1_mix_00090102	chrX	-	1367	11	FSM	ENSG00000196998.19	ENST00000376368.7	1381	11	14	0	0	0	multi-exon	FALSE	canonical	2	13	junction_7	57.8796164465522	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGCTGGTGCCCACTTTC	-17	True	NA	-66	True	NA	NA	NA	49079915	49074703	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_49074913_49075135_49075282_49075363_49075466_49075544_49075754_49075865_49075946_49076429_49076525_49076644_49076754_49077642_49077748_49077836_49077912_49078040_49078113_49079750
H1_mix_00090104	chrX	-	1676	11	FSM	ENSG00000068394.11	ENST00000156109.7	1658	11	0	-18	0	18	multi-exon	FALSE	canonical	3	138	junction_4	7.52661942707349	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAAGTGGTATGATGAGC	-3	True	NA	-4	True	AATAAA	-33	NA	49123735	49113388	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_49113756_49113852_49113939_49115725_49115796_49115890_49116015_49116220_49116324_49117029_49117163_49117596_49117811_49119704_49119815_49122397_49122523_49122621_49122777_49123546
H1_mix_00090105	chrX	-	2813	9	FSM	ENSG00000012211.13	ENST00000599218.6	2795	9	0	-18	0	18	multi-exon	FALSE	canonical	3	80	junction_4	12.4442506805352	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGGGAATGTTGTTGTT	-7	True	NA	6	True	AATAAA	-36	NA	49186373	49174783	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_49176266_49176902_49177203_49177992_49178180_49178271_49178476_49179250_49179389_49179692_49179807_49183733_49183918_49184624_49184711_49186255
H1_mix_00090106	chrX	-	2717	9	NIC	ENSG00000012211.13	novel	2795	9	NA	NA	12	-16	combination_of_known_junctions	FALSE	canonical	3	20	junction_8	26.9293055981769	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTTTTACCTCAAAGAGG	9411	False	NA	-28	True	AATAAA	-2	NA	49184881	49174817	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_49176266_49176902_49177203_49177992_49178180_49178271_49178476_49179250_49179389_49179692_49179807_49183733_49183918_49184624_49184711_49184825
H1_mix_00090107	chrX	-	2467	7	FSM	ENSG00000102003.12	ENST00000263233.9	2421	7	-41	-5	-16	5	multi-exon	FALSE	canonical	3	36	junction_1	4.6696419087073	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGGCTCTGATTTCTCAGT	44	False	NA	-5	True	AATAAA	-21	NA	49200234	49187809	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_49189283_49191432_49191764_49193271_49193464_49194165_49194362_49197714_49197840_49198967_49199034_49200150
H1_mix_00090110	chrX	-	1597	11	FSM	ENSG00000049768.17	ENST00000376199.7	1597	11	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_4	1.79164728671689	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACACCCCCCAGTCGAGCC	4316	False	NA	NA	False	NA	NA	NA	49264800	49251089	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_49251484_49251663_49251766_49253125_49253203_49253916_49254068_49255428_49255510_49255714_49255803_49256750_49256856_49256924_49257013_49257426_49257566_49258295_49258528_49264660
H1_mix_00090111	chrX	-	909	1	FSM	ENSG00000213856.3	ENST00000423609.1	850	1	26	-85	26	85	mono-exon	FALSE	NA	NA	NA	NA	NA	538	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGATGCAAGTATTGCTA	56	False	NA	NA	False	NA	NA	NA	49633323	49632414	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_49632400_49633300
H1_mix_00090113	chrX	-	7494	28	FSM	ENSG00000274588.2	ENST00000611977.2	7494	28	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_17	3.59850601525663	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGCCGTGCCTCATCAT	-1	True	NA	-20	True	AATAAA	-42	NA	50470825	50365408	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_50369020_50370425_50370550_50371723_50371835_50374970_50375058_50376023_50376166_50376757_50376919_50378097_50378233_50378577_50378692_50379626_50379735_50379980_50380078_50382495_50382604_50384167_50384265_50384719_50384825_50386357_50386587_50387553_50387654_50388526_50388619_50390327_50390410_50391436_50391577_50392340_50392450_50393151_50393336_50401036_50401140_50403060_50403184_50403490_50403598_50404048_50404185_50420402_50420508_50422445_50422527_50424247_50424359_50470033
H1_mix_00090114	chrX	-	14500	9	FSM	ENSG00000158352.18	ENST00000376020.9	14557	9	49	8	49	-8	multi-exon	FALSE	canonical	1	2	junction_7	3.6721077053921	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCAAAGATATTTTCTCC	6	True	NA	NA	False	AATAAA	-7	NA	50814145	50586803	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_50596965_50598265_50598536_50602632_50602814_50607380_50608185_50627613_50627676_50633177_50635669_50638173_50638309_50695785_50695938_50813901
H1_mix_00090115	chrX	-	6109	10	FSM	ENSG00000158352.18	ENST00000289292.11	6261	10	157	-5	49	5	multi-exon	FALSE	canonical	1	2	junction_8	3.62092683040007	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAGTACTTAGGAATA	6	True	NA	NA	False	AAGAAA	-45	NA	50814145	50591641	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_50592145_50595697_50596965_50598265_50598536_50602632_50602814_50607380_50608185_50627613_50627676_50633177_50635669_50638173_50638309_50695785_50695938_50813901
H1_mix_00090116	chrX	-	2402	2	FSM	ENSG00000196368.5	ENST00000375992.4	2381	2	0	-21	0	21	multi-exon	FALSE	canonical	3	320	junction_1	0	453	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCCTCTCTCCTAGACTT	-5	True	NA	8	True	AATAAA	-36	NA	51496592	51489989	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_51491750_51495950
H1_mix_00090117	chrX	-	1932	1	FSM	ENSG00000224109.4	ENST00000417339.4	1893	1	-39	0	-39	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1592	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCTGGATACTCTTTCCA	NA	False	NA	-8	True	AATAAA	-31	NA	51618951	51617019	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_51617000_51619000
H1_mix_00090118	chrX	-	1631	1	FSM	ENSG00000283093.1	ENST00000634648.1	1620	1	-21	10	-21	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAGGAAACTATGTGTGT	NA	False	NA	NA	False	AGTAAA	-5	NA	51682852	51681221	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_51681200_51682900
H1_mix_00090119	chrX	-	2575	13	FSM	ENSG00000187243.17	ENST00000335504.10	2513	13	-65	3	-29	-3	multi-exon	FALSE	canonical	3	900	junction_12	203.85568152222	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTGGATGTTTCTTCCT	NA	False	NA	NA	False	ATTAAA	-11	NA	52069248	52061829	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_52062039_52062233_52062665_52062986_52063102_52064046_52064110_52064500_52064544_52064628_52064709_52065329_52065422_52065809_52065890_52066082_52066147_52066249_52066454_52066864_52067699_52067962_52068204_52069129
H1_mix_00090120	chrX	-	2482	13	FSM	ENSG00000187243.17	ENST00000497164.5	2482	13	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_12	333.701546628454	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	0	True	NA	NA	False	ATTAAA	-14	NA	52069182	52061826	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_52062039_52062233_52062665_52062986_52063102_52064046_52064110_52064500_52064544_52064628_52064709_52065329_52065422_52065809_52065890_52066082_52066147_52066249_52066454_52066864_52067699_52067962_52068174_52069129
H1_mix_00090121	chrX	-	2995	12	FSM	ENSG00000187243.17	ENST00000470594.5	2995	12	0	0	0	0	multi-exon	TRUE	canonical	3	44	junction_11	508.101099460262	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	0	True	NA	NA	False	ATTAAA	-14	NA	52069182	52061826	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_52062039_52062221_52062665_52062986_52063102_52064046_52064110_52064500_52064544_52064628_52064709_52065329_52065422_52065809_52065890_52066082_52066147_52066249_52067699_52067962_52068264_52069129
H1_mix_00090122	chrX	-	2537	13	NIC	ENSG00000187243.17	novel	2513	13	NA	NA	3	0	intron_retention	FALSE	canonical	3	188	junction_1	368.689910358285	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	34	False	NA	NA	False	ATTAAA	-14	NA	52069195	52061826	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_52062039_52062221_52062665_52062986_52063102_52064046_52064110_52064500_52064544_52064628_52064709_52065329_52065422_52065809_52065890_52066082_52066147_52066249_52066454_52066864_52067699_52067962_52068204_52069129
H1_mix_00090123	chrX	-	2548	13	NIC	ENSG00000187243.17	novel	2618	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	222	junction_12	357.55007419319	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	32	False	NA	NA	False	ATTAAA	-14	NA	52069197	52061826	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_52062039_52062233_52062665_52062986_52063102_52064046_52064110_52064500_52064544_52064628_52064709_52065329_52065422_52065809_52065890_52066082_52066147_52066249_52066454_52066864_52067699_52067962_52068225_52069129
H1_mix_00090126	chrX	-	4126	3	FSM	ENSG00000268350.8	ENST00000622447.5	3791	3	17	-352	0	352	multi-exon	FALSE	canonical	3	131	junction_1	19.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGTGGGTGAAACTGAGCA	NA	False	NA	NA	False	GGGGCT	-31	NA	52958501	52946901	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_52948706_52955153_52955247_52956272
H1_mix_00090127	chrX	-	2068	4	FSM	ENSG00000268350.8	ENST00000619518.5	1733	4	17	-352	0	352	multi-exon	FALSE	canonical	3	36	junction_3	56.2751178487339	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGTGGGTGAAACTGAGCA	NA	False	NA	NA	False	GGGGCT	-31	NA	52958501	52946901	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_52948706_52955153_52955247_52956272_52956347_52958404
H1_mix_00090128	chrX	-	3385	4	FSM	ENSG00000268350.8	ENST00000596733.7	2942	4	-87	-356	0	352	multi-exon	FALSE	canonical	3	58	junction_3	46.4207807871527	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGTGGGTGAAACTGAGCA	NA	False	NA	NA	False	GGGGCT	-31	NA	52958501	52946901	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_52948706_52955153_52955247_52956272_52956347_52957087
H1_mix_00090130	chrX	-	6647	26	FSM	ENSG00000126012.13	ENST00000375401.8	5810	26	0	-837	0	0	multi-exon	FALSE	canonical	3	98	junction_2	30.751754421496	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGTGTCTAGCTTCTT	0	True	NA	0	True	CATAAA	-21	NA	53225207	53191320	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53193333_53193436_53193637_53193772_53193852_53194138_53194739_53194930_53195069_53195230_53195411_53195915_53196055_53196685_53197045_53197770_53197877_53198489_53198638_53198763_53198889_53198976_53199159_53201549_53201745_53201853_53201974_53210413_53210577_53210675_53210858_53211496_53211656_53211786_53211907_53214688_53214848_53215794_53215977_53216073_53216198_53217142_53217278_53217795_53217967_53218275_53218399_53220838_53220917_53224739
H1_mix_00090132	chrX	-	5223	26	FSM	ENSG00000126012.13	ENST00000375379.7	5245	26	22	0	22	0	multi-exon	FALSE	canonical	3	130	junction_13	28.0057137027429	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGGCCTCAAGGATCCTC	49	False	NA	NA	False	NA	NA	NA	53225400	53192928	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53193333_53193436_53193637_53193781_53193852_53194138_53194739_53194930_53195069_53195230_53195411_53195915_53196055_53196685_53197045_53197770_53197877_53198489_53198638_53198763_53198889_53198976_53199159_53201549_53201745_53201853_53201974_53210413_53210577_53210675_53210858_53211496_53211656_53211786_53211907_53214688_53214848_53215794_53215977_53216073_53216198_53217142_53217278_53217795_53217967_53218275_53218399_53220838_53220917_53224739
H1_mix_00090136	chrX	-	6146	14	FSM	ENSG00000124313.18	ENST00000640694.1	5958	14	-189	1	-158	0	multi-exon	FALSE	canonical	3	14	junction_1	5.44145821040843	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCCTCTGCCTCCTAC	NA	False	NA	-5	True	CATAAA	-16	NA	53321508	53232874	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53235185_53236321_53236496_53238144_53238307_53239194_53239295_53241783_53241910_53243331_53243472_53246968_53247136_53248113_53248237_53248720_53248883_53250278_53251175_53254529_53254932_53255799_53256062_53291894_53291925_53320416
H1_mix_00090137	chrX	-	926	3	FSM	ENSG00000124313.18	ENST00000639161.2	922	3	0	-4	0	0	multi-exon	FALSE	canonical	3	25	junction_2	5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGATGTATATTCCACC	-5	True	NA	-2	True	AATAAA	-18	NA	53281584	53266323	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53267065_53279563_53279660_53281495
H1_mix_00090140	chrX	-	9710	25	FSM	ENSG00000072501.19	ENST00000322213.9	9710	25	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_22	49.9894259652312	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGTGTCTTTGTTCC	13	True	NA	-4	True	AATAAA	-14	NA	53422654	53374148	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53380187_53380619_53380731_53381017_53381088_53382231_53382384_53382505_53382661_53383096_53383254_53394777_53394889_53396226_53396381_53396471_53396618_53399588_53399731_53403565_53403673_53403776_53403894_53405011_53405150_53405244_53405392_53405492_53405673_53405770_53405957_53409061_53409270_53409420_53409504_53411760_53411902_53411994_53412254_53412899_53413139_53413231_53413436_53414757_53414871_53414980_53415170_53422491
H1_mix_00090141	chrX	-	838	6	FSM	ENSG00000072501.19	ENST00000470241.2	838	6	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	197.478100051626	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGGCGGGCCTGGCTCAG	8695	False	NA	NA	False	NA	NA	NA	53396378	53380619	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53380731_53382231_53382384_53382505_53382661_53383096_53383254_53394777_53394889_53396226
H1_mix_00090142	chrX	-	486	2	FSM	ENSG00000072501.19	ENST00000469129.1	847	2	0	361	0	-361	multi-exon	FALSE	canonical	3	525	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCAGCATGTCCTCACCG	NA	False	NA	NA	False	NA	NA	NA	53382646	53382038	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53382384_53382505
H1_mix_00090143	chrX	-	1043	6	FSM	ENSG00000072506.14	ENST00000375304.9	916	6	-44	-83	-30	83	multi-exon	FALSE	canonical	3	129	junction_1	306.038821066871	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGGGTGGGAAAGGCAGT	-1	True	NA	81	True	AAGAAA	-40	NA	53434400	53431174	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53431595_53431824_53431907_53431987_53432117_53432246_53432412_53433721_53433887_53434318
H1_mix_00090144	chrX	-	1156	5	FSM	ENSG00000072506.14	ENST00000684692.1	1154	5	0	-2	0	-1	multi-exon	FALSE	canonical	3	758	junction_4	78.3848677998502	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTAGGCAGTGTTGTGTGC	2	True	NA	-3	True	AATAAA	-19	NA	53434367	53431258	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53431907_53431987_53432117_53432246_53432412_53433721_53433887_53434318
H1_mix_00090145	chrX	-	957	6	FSM	ENSG00000072506.14	ENST00000168216.11	954	6	0	-3	0	0	multi-exon	FALSE	canonical	3	758	junction_5	72.560595366907	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGCAGTGTTGTGTGCT	-1	True	NA	-2	True	AATAAA	-20	NA	53434370	53431257	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53431595_53431797_53431907_53431987_53432117_53432246_53432412_53433721_53433887_53434318
H1_mix_00090146	chrX	-	823	5	FSM	ENSG00000072506.14	ENST00000375298.4	823	5	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	350.819308904171	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTGTAGGCAGTGTTGT	-2	True	NA	-7	True	AATAAA	-15	NA	53434350	53431262	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53431595_53431987_53432117_53432246_53432412_53433721_53433887_53434318
H1_mix_00090148	chrX	-	4817	18	FSM	ENSG00000086758.16	ENST00000426907.5	4805	18	0	-12	0	12	multi-exon	FALSE	canonical	3	207	junction_11	135.196972796314	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGGTTTTTCTCATTT	NA	False	NA	14	True	AATAAA	-39	NA	53549505	53532083	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53533412_53534006_53534198_53534515_53534698_53535383_53535502_53536146_53536253_53536379_53536668_53537555_53537697_53538336_53538455_53538834_53539081_53539656_53539813_53542442_53542540_53543885_53543969_53544559_53544763_53545028_53545162_53546435_53546593_53546703_53546826_53547672_53548274_53548958
H1_mix_00090149	chrX	-	14323	81	FSM	ENSG00000086758.16	ENST00000612484.4	14311	81	0	-12	0	12	multi-exon	FALSE	canonical	2	9	junction_56	191.804522887235	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGGTTTTTCTCATTT	9770	False	NA	14	True	AATAAA	-39	NA	53654107	53532083	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53533412_53534006_53534198_53534515_53534698_53535383_53535502_53536146_53536253_53536379_53536668_53537555_53537697_53538336_53538455_53538834_53539081_53539656_53539813_53542442_53542540_53543840_53543969_53544559_53544763_53545028_53545162_53546435_53546593_53546703_53546826_53547672_53548274_53548958_53549506_53550665_53550769_53550900_53551190_53551265_53551481_53552310_53552442_53552637_53552894_53554632_53554921_53557381_53557428_53558654_53558810_53558970_53559061_53559353_53559533_53560187_53560417_53561755_53561925_53562110_53562245_53562830_53562930_53563745_53563822_53564573_53564723_53565066_53565240_53568691_53568875_53569615_53569828_53573749_53573965_53575154_53575222_53575642_53575789_53576899_53577068_53580830_53581027_53583557_53583917_53584185_53584346_53585011_53585189_53586489_53586572_53586781_53586910_53588381_53588535_53589546_53589817_53590403_53590500_53590999_53591123_53592397_53592629_53593363_53593602_53594498_53594622_53595186_53595404_53600117_53600310_53602590_53602659_53603367_53603502_53604588_53604835_53607522_53607700_53608851_53608910_53614533_53614746_53615743_53615836_53616969_53617148_53617339_53617447_53624594_53624676_53625156_53625259_53627409_53627516_53627738_53627880_53628492_53628621_53628751_53628903_53629515_53629617_53630934_53631035_53631413_53631483_53631566_53631615_53632486_53632565_53634235_53634299_53645310_53645464_53647367_53647575_53648211_53648311_53654062
H1_mix_00090150	chrX	-	14808	83	FSM	ENSG00000086758.16	ENST00000342160.7	14796	83	0	-12	0	12	multi-exon	FALSE	canonical	2	28	junction_67	190.389939258488	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGGTTTTTCTCATTT	-16	True	NA	14	True	AATAAA	-39	NA	53684169	53532083	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53533412_53534006_53534198_53534515_53534698_53535383_53535502_53536146_53536253_53536379_53536668_53537555_53537697_53538336_53538455_53538834_53539081_53539656_53539813_53542442_53542540_53543840_53543969_53544559_53544763_53545028_53545162_53546435_53546593_53546703_53546826_53547672_53548274_53548958_53549506_53550665_53550769_53550900_53551190_53551265_53551481_53552310_53552442_53552637_53552894_53554632_53554921_53557381_53557428_53558654_53558810_53558970_53559061_53559353_53559533_53560187_53560417_53561755_53561925_53562110_53562245_53562830_53562930_53563745_53563822_53564573_53564723_53565066_53565240_53568691_53568875_53569615_53569828_53573749_53573965_53575154_53575222_53575642_53575789_53576899_53577068_53580830_53581027_53583557_53583917_53584185_53584346_53585011_53585189_53586489_53586572_53586781_53586910_53588381_53588535_53589546_53589817_53590403_53590500_53590999_53591123_53592397_53592629_53593363_53593602_53594498_53594622_53595186_53595404_53600117_53600310_53602563_53602659_53603367_53603502_53604588_53604835_53607522_53607700_53608851_53608910_53614533_53614746_53615743_53615836_53616969_53617148_53617339_53617447_53624594_53624676_53625156_53625259_53627409_53627516_53627738_53627880_53628492_53628621_53628751_53628903_53629515_53629617_53630934_53631035_53631413_53631483_53631566_53631615_53632486_53632565_53634235_53634299_53645310_53645464_53647367_53647575_53648211_53648311_53654062_53654132_53680048_53680187_53683873
H1_mix_00090151	chrX	-	14740	84	FSM	ENSG00000086758.16	ENST00000262854.11	14731	84	0	-9	0	9	multi-exon	FALSE	canonical	2	28	junction_67	190.971947683051	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTGTGGTTTTTCTCA	3	True	NA	11	True	AATAAA	-36	NA	53686719	53532086	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53533412_53534006_53534198_53534515_53534698_53535383_53535502_53536146_53536253_53536379_53536668_53537555_53537697_53538336_53538455_53538834_53539081_53539656_53539813_53542442_53542540_53543840_53543969_53544559_53544763_53545028_53545162_53546435_53546593_53546703_53546826_53547672_53548274_53548958_53549506_53550665_53550769_53550900_53551190_53551265_53551481_53552310_53552442_53552637_53552894_53554632_53554921_53557381_53557428_53558654_53558810_53558970_53559061_53559353_53559533_53560187_53560417_53561755_53561925_53562110_53562245_53562830_53562930_53563745_53563822_53564573_53564723_53565066_53565240_53568691_53568875_53569615_53569828_53573749_53573965_53575154_53575222_53575642_53575789_53576899_53577068_53580830_53581027_53583557_53583917_53584185_53584346_53585011_53585189_53586489_53586572_53586781_53586910_53588381_53588535_53589546_53589817_53590403_53590500_53590999_53591123_53592397_53592629_53593363_53593602_53594498_53594622_53595186_53595404_53600117_53600310_53602563_53602659_53603367_53603502_53604588_53604835_53607522_53607700_53608851_53608910_53614533_53614746_53615743_53615836_53616969_53617148_53617339_53617447_53624594_53624676_53625156_53625259_53627409_53627516_53627738_53627880_53628492_53628621_53628751_53628903_53629515_53629617_53630934_53631035_53631413_53631483_53631566_53631615_53632486_53632565_53634235_53634299_53645310_53645464_53647367_53647575_53648211_53648311_53654062_53654132_53680048_53680187_53686269_53686369_53686587
H1_mix_00090153	chrX	-	14375	84	NIC	ENSG00000086758.16	novel	14796	83	NA	NA	-73	-698	combination_of_known_junctions	FALSE	canonical	2	46	junction_67	189.996662842854	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTTTTCACAATGGAGT	2514	False	NA	-26	True	AATAAA	-16	NA	53684242	53532793	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_53533412_53534006_53534198_53534515_53534698_53535383_53535502_53536146_53536253_53536379_53536668_53537555_53537697_53538336_53538455_53538834_53539081_53539656_53539813_53542442_53542540_53543885_53543969_53544559_53544763_53545028_53545162_53546435_53546593_53546703_53546826_53547672_53548274_53548958_53549506_53550665_53550769_53550900_53551190_53551265_53551481_53552310_53552442_53552637_53552894_53554632_53554921_53557381_53557428_53558654_53558810_53558970_53559061_53559353_53559533_53560187_53560417_53561755_53561925_53562110_53562245_53562830_53562930_53563745_53563822_53564573_53564723_53565066_53565240_53568691_53568875_53569615_53569828_53573749_53573965_53575154_53575222_53575642_53575789_53576899_53577068_53580830_53581027_53583557_53583917_53584185_53584346_53585011_53585189_53586489_53586572_53586781_53586910_53588381_53588535_53589546_53589817_53590403_53590500_53590999_53591123_53592397_53592629_53593363_53593602_53594498_53594622_53595186_53595404_53600117_53600310_53602563_53602659_53603367_53603502_53604588_53604835_53607522_53607700_53608851_53608910_53614533_53614746_53615743_53615836_53616969_53617148_53617339_53617447_53624594_53624676_53625156_53625259_53625785_53626035_53627409_53627516_53627738_53627880_53628492_53628621_53628751_53628903_53629515_53629617_53630934_53631035_53631413_53631483_53631566_53631615_53632486_53632565_53634235_53634299_53645310_53645464_53647367_53647575_53648211_53648311_53654062_53654132_53680048_53680187_53683873
H1_mix_00090155	chrX	-	14377	85	NNC	ENSG00000086758.16	novel	14731	84	NA	NA	6	-698	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_83	191.386015688539	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTTTTCACAATGGAGT	9	True	NA	-26	True	AATAAA	-16	NA	53686713	53532793	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_53533412_53534006_53534198_53534515_53534698_53535383_53535502_53536146_53536253_53536379_53536668_53537555_53537697_53538336_53538455_53538834_53539081_53539656_53539813_53542442_53542540_53543840_53543969_53544559_53544763_53545028_53545162_53546435_53546593_53546703_53546826_53547672_53548274_53548958_53549506_53550665_53550769_53550900_53551190_53551265_53551481_53552310_53552442_53552637_53552894_53554632_53554921_53557381_53557428_53558654_53558810_53558970_53559061_53559353_53559533_53560187_53560417_53561755_53561925_53562110_53562245_53562830_53562930_53563745_53563822_53564573_53564723_53565066_53565240_53568691_53568875_53569615_53569828_53573749_53573965_53575154_53575222_53575642_53575786_53576899_53577068_53580830_53581027_53583557_53583917_53584185_53584346_53585011_53585189_53586489_53586572_53586781_53586910_53588381_53588535_53589546_53589817_53590403_53590500_53590999_53591123_53592397_53592629_53593363_53593602_53594498_53594622_53595186_53595404_53600117_53600310_53602563_53602659_53603367_53603502_53604588_53604835_53607522_53607700_53608851_53608910_53614533_53614746_53615743_53615836_53616969_53617148_53617339_53617447_53624594_53624676_53625156_53625259_53625785_53626035_53627409_53627516_53627738_53627880_53628492_53628621_53628751_53628903_53629515_53629617_53630934_53631035_53631413_53631483_53631566_53631615_53632486_53632565_53634235_53634299_53645310_53645464_53647367_53647575_53648211_53648311_53654062_53654132_53680048_53680187_53686165_53686369_53686587
H1_mix_00090161	chrX	-	6439	22	FSM	ENSG00000172943.21	ENST00000338154.11	6357	22	0	-82	0	78	multi-exon	FALSE	canonical	3	65	junction_10	14.4815153113991	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTCTCCCTCAGCA	-8	True	NA	78	True	NA	NA	NA	54044473	53936597	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53939247_53940179_53940517_53944133_53944244_53962843_53962940_53984913_53985228_53985815_53985950_53987077_53987164_53987765_53987945_53992735_53992840_53993600_53993904_53995692_53995783_53999869_53999962_54002154_54002262_54002594_54002683_54011121_54011285_54014376_54014564_54016594_54016737_54017660_54017822_54022258_54022368_54022757_54022844_54042630_54042821_54043761
H1_mix_00090162	chrX	-	5664	22	NIC	ENSG00000172943.21	novel	6357	22	NA	NA	64	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	23.5025930928093	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTTGCTTGGCATTCTT	NA	False	NA	-4	True	GATAAA	-19	NA	54045185	53936679	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_53938060_53939161_53939247_53940179_53940517_53944133_53944244_53962843_53962940_53984913_53985228_53985815_53985950_53987077_53987164_53987765_53987945_53992735_53992840_53995692_53995783_53999869_53999962_54002154_54002262_54002594_54002683_54011121_54011285_54014376_54014564_54016594_54016737_54017660_54017822_54022258_54022368_54022757_54022844_54042630_54042821_54043761
H1_mix_00090163	chrX	-	6199	21	NIC	ENSG00000172943.21	novel	6357	22	NA	NA	-147	-2	intron_retention	FALSE	canonical	3	39	junction_9	17.5655913649384	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCTTTGCTTGGCATTC	524	False	NA	-6	True	GATAAA	-17	NA	54044620	53936681	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_53939247_53940179_53940517_53944133_53944244_53962843_53962940_53984913_53985228_53985815_53985950_53987077_53987164_53987765_53987945_53992735_53992840_53995692_53995783_53999869_53999962_54002154_54002262_54002594_54002683_54011121_54011285_54014376_54014564_54016594_54016737_54017660_54017822_54022258_54022368_54022757_54022844_54042630_54042821_54043761
H1_mix_00090167	chrX	-	1140	2	FSM	ENSG00000184083.12	ENST00000477084.1	1140	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGTTGTGCTTGTTCTTT	282	False	NA	0	True	AATAGA	-17	NA	54183281	54173788	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_54174147_54182499
H1_mix_00090168	chrX	-	11172	23	FSM	ENSG00000196632.11	ENST00000375169.7	11172	23	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_22	11.2827118538435	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTGGCTAAAACTGGTT	22	True	NA	-10	True	ATTAAA	-22	NA	54358005	54192822	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_54198654_54201990_54202194_54232808_54233021_54236937_54237552_54238341_54238473_54239008_54239100_54248696_54249635_54249993_54250132_54251398_54251451_54251531_54251688_54253958_54254076_54255739_54255888_54259273_54259339_54292887_54293038_54293133_54293328_54294552_54294848_54298174_54298395_54301770_54301860_54307921_54308080_54309094_54309316_54311118_54311292_54333136_54333793_54357685
H1_mix_00090171	chrX	-	4343	18	FSM	ENSG00000102302.8	ENST00000375135.4	4343	18	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_16	30.3848441550267	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCATAGCACTGCTGTGC	-4	True	NA	-10	True	AATACA	-23	NA	54496234	54445453	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_54446415_54447310_54447455_54448805_54448968_54449142_54449269_54449658_54449761_54450270_54450302_54455447_54455528_54455691_54455785_54456219_54456367_54456508_54456568_54465450_54465590_54465695_54465853_54467783_54467933_54468786_54468877_54470015_54470458_54470582_54470761_54471313_54471488_54495125
H1_mix_00090173	chrX	-	3455	3	FSM	ENSG00000182518.14	ENST00000477847.6	1170	3	0	-2285	0	0	multi-exon	FALSE	canonical	3	51	junction_2	116	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGATCTGTGTCTCTCT	5	True	NA	-5	True	AATAAA	-22	NA	55161119	55143101	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_55146312_55159128_55159229_55160974
H1_mix_00090174	chrX	-	1179	4	FSM	ENSG00000182518.14	ENST00000358460.8	1179	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	115.345856738188	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGATCTGTGTCTCTCT	NA	False	NA	-5	True	AATAAA	-22	NA	55161310	55143101	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_55143876_55146180_55146312_55159128_55159229_55161136
H1_mix_00090175	chrX	-	3955	3	FSM	ENSG00000182518.14	ENST00000425133.2	1229	3	-583	-2143	-468	0	multi-exon	FALSE	canonical	0	0	junction_1	136	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGATCTGTGTCTCTCT	NA	False	NA	-5	True	AATAAA	-22	NA	55161778	55143101	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_55146312_55159125_55159229_55161136
H1_mix_00090176	chrX	-	1109	3	FSM	ENSG00000182518.14	ENST00000472571.2	1109	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	108	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACTGCACAATTCTGTC	-6	True	NA	NA	False	NA	NA	NA	55161182	55145355	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_55146312_55159121_55159229_55161136
H1_mix_00090177	chrX	-	342	3	FSM	ENSG00000182518.14	ENST00000478918.1	342	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	140	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCAGAGAGAGCAAGTGGA	235	False	NA	NA	False	AATGAA	-23	NA	55160941	55146268	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_55146312_55159128_55159229_55160742
H1_mix_00090178	chrX	-	5244	3	FSM	ENSG00000247746.5	ENST00000500968.4	4643	3	-601	0	-601	0	multi-exon	FALSE	canonical	2	2	junction_1	2	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGTTCAGTTATTTGCT	NA	False	NA	-4	True	AATAAA	-18	NA	55490449	55484615	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_55488989_55489168_55489366_55489775
H1_mix_00090180	chrX	-	1620	5	FSM	ENSG00000204271.13	ENST00000478405.1	1620	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	10.356157588604	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTCTCTAACAGTGTGA	10	True	NA	-13	True	AATAAA	-20	NA	56995525	56976381	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_56977197_56978579_56978661_56984265_56984479_56994722_56994950_56995241
H1_mix_00090182	chrX	-	4445	2	FSM	ENSG00000204271.13	ENST00000374919.6	4445	2	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTCCTGTGTATATTT	-6	True	NA	0	True	ATTAAA	-20	NA	56995541	56990830	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_56994950_56995215
H1_mix_00090186	chrX	-	1361	2	NNC	ENSG00000186787.10	novel	1261	2	NA	NA	0	0	intron_retention	FALSE	canonical	3	54	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTGTGTAAGCCCTT	25	True	NA	-3	True	AATACA	-18	NA	57121491	57119681	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_57120632_57121080
H1_mix_00090187	chrX	-	1194	2	NNC	ENSG00000186787.10	novel	1261	2	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTGTGTAAGCCCTT	30	True	NA	-3	True	AATACA	-18	NA	57121486	57119681	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_57120632_57121242
H1_mix_00090188	chrX	-	1261	2	FSM	ENSG00000186787.10	ENST00000434397.3	1261	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTGTGTAAGCCCTT	-32	True	NA	-3	True	AATACA	-18	NA	57121548	57119681	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_57120632_57121237
H1_mix_00090189	chrX	-	2459	1	FSM	ENSG00000147059.9	ENST00000374908.1	2468	1	23	-14	23	14	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTGTCCATGCTTCTTT	617	False	NA	NA	False	NA	NA	NA	57136974	57134515	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_57134500_57137000
H1_mix_00090190	chrX	-	1319	2	FSM	ENSG00000147059.9	ENST00000374906.4	1091	2	-228	0	-102	0	multi-exon	FALSE	canonical	3	18	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTCTGTAAGCCCTT	NA	False	NA	-12	True	AATACA	-18	NA	57137625	57135649	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_57136603_57137259
H1_mix_00090192	chrX	-	1706	1	FSM	ENSG00000231831.1	ENST00000413059.1	2764	1	546	512	546	-512	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGACTGAGCTGGACCTCA	588	False	NA	NA	False	NA	NA	NA	57394863	57393157	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_57393200_57394900
H1_mix_00090195	chrX	-	4105	1	FSM	ENSG00000186767.7	ENST00000374884.3	4105	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAATTATCTTTGTATT	-9	True	NA	-9	True	AATAAA	-20	NA	63351332	63347227	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_63347200_63351300
H1_mix_00090196	chrX	-	327	2	FSM	ENSG00000235437.9	ENST00000608788.6	667	2	0	340	0	-340	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTCTCTCTCAGATTC	16	True	NA	NA	False	NA	NA	NA	63561035	63399780	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_63399904_63560831
H1_mix_00090197	chrX	-	5190	4	FSM	ENSG00000235437.9	ENST00000609401.6	2973	4	138	-2355	0	2354	multi-exon	FALSE	canonical	3	48	junction_2	12.684198393627	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGCTGCCTCTGCAGGT	109	False	NA	NA	False	ACTAAA	-29	NA	63560942	63424203	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_63428982_63432363_63432492_63516909_63517083_63560831
H1_mix_00090198	chrX	-	1928	4	NIC	ENSG00000235437.9	novel	1978	5	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	4.10960933531265	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTCTGTTCCGTTCTT	4	True	NA	-1	True	AATAAA	-17	NA	63561047	63426557	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_63428006_63432363_63432492_63509943_63510080_63560831
H1_mix_00090199	chrX	-	810	3	FSM	ENSG00000235437.9	ENST00000669422.1	816	3	6	0	1	0	multi-exon	FALSE	canonical	3	42	junction_1	4	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTCTGTTCCGTTCTT	-23	True	NA	-1	True	AATAAA	-17	NA	63561074	63426557	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_63426997_63432363_63432492_63560831
H1_mix_00090200	chrX	-	5055	1	FSM	ENSG00000235437.9	ENST00000608623.1	5053	1	0	-2	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTCTGTTCCGTTCTT	2794	False	NA	-1	True	AATAAA	-17	NA	63431612	63426557	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_63426600_63431600
H1_mix_00090201	chrX	-	2807	3	FSM	ENSG00000235437.9	ENST00000609143.7	2816	3	9	0	-6	0	multi-exon	FALSE	canonical	3	50	junction_2	14	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTCTGTTCCGTTCTT	-35	False	NA	-1	True	AATAAA	-17	NA	63561086	63426557	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_63428982_63432363_63432492_63560831
H1_mix_00090203	chrX	-	5128	10	FSM	ENSG00000131089.17	ENST00000671741.2	4702	10	-420	-6	-76	6	multi-exon	FALSE	canonical	3	103	junction_9	25.2004311152619	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCATAGCTCTCGTTCGTGT	NA	False	NA	5	True	AATAAA	-22	NA	63785634	63634960	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_63638210_63643979_63644049_63655493_63655738_63665885_63666018_63674037_63674168_63678339_63678573_63697124_63697305_63706257_63706450_63724531_63724712_63785115
H1_mix_00090204	chrX	-	4886	9	FSM	ENSG00000131089.17	ENST00000672513.1	4886	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	61.2367332570901	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTATGGAGTTCAATAA	436	False	NA	-37	True	NA	NA	NA	63754765	63635002	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_63638210_63643979_63644049_63655493_63655738_63674037_63674168_63678339_63678573_63697124_63697305_63706257_63706450_63724531_63724712_63754314
H1_mix_00090205	chrX	-	5285	10	FSM	ENSG00000131089.17	ENST00000624538.2	5285	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_9	43.5237979461159	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTATGGAGTTCAATAA	169	False	NA	-37	True	NA	NA	NA	63755032	63635002	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_63638210_63643979_63644049_63655493_63655738_63665885_63666018_63674037_63674168_63678339_63678573_63697124_63697305_63706257_63706450_63724531_63724712_63754314
H1_mix_00090208	chrX	-	672	4	FSM	ENSG00000102043.16	ENST00000478487.5	694	4	0	22	0	-14	multi-exon	FALSE	canonical	1	1	junction_1	13.1233464566864	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACTTTTGAAGCATAAAG	NA	False	NA	NA	False	AATAAA	-2	NA	64345158	64331435	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_64331758_64337267_64337394_64343610_64343721_64345044
H1_mix_00090211	chrX	-	2706	5	FSM	ENSG00000126970.16	ENST00000374839.8	2724	5	0	18	0	-18	multi-exon	FALSE	canonical	3	114	junction_4	37.1306813834597	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCCTCATCTGGAAAATG	-8	True	NA	-14	True	AATAAA	-17	NA	64976450	64915824	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_64917897_64919041_64919205_64920080_64920254_64921816_64921989_64976324
H1_mix_00090212	chrX	-	3014	5	FSM	ENSG00000126970.16	ENST00000488831.5	606	5	-578	-1830	-534	-203	multi-exon	FALSE	canonical	3	33	junction_4	70.6275442019613	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCAGAATGGCTTGATGA	NA	False	NA	NA	False	AAGAAA	-11	NA	65035247	64916009	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_64917897_64919041_64919205_64920080_64920254_64921816_64921989_65034628
H1_mix_00090215	chrX	-	2379	13	NIC	ENSG00000001497.18	novel	2386	13	NA	NA	4	0	intron_retention	FALSE	canonical	3	98	junction_2	197.171720842518	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGTGTTTGTGAGATG	16	True	NA	-1	True	AATAAA	-13	NA	65534750	65512581	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_65512902_65514822_65514971_65517986_65518466_65523559_65523708_65524055_65524263_65524964_65525051_65528259_65528370_65529211_65529259_65529593_65529879_65531356_65531439_65532560_65532631_65533609_65533736_65534479
H1_mix_00090216	chrX	-	2386	13	FSM	ENSG00000001497.18	ENST00000374807.9	2386	13	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_5	75.8423071613434	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGTGTTTGTGAGATG	12	True	NA	-1	True	AATAAA	-13	NA	65534754	65512581	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_65512902_65514822_65514974_65517986_65518466_65523559_65523708_65524055_65524263_65524964_65525051_65528259_65528370_65529211_65529259_65529593_65529879_65531356_65531439_65532560_65532631_65533609_65533736_65534479
H1_mix_00090217	chrX	-	2470	14	FSM	ENSG00000001497.18	ENST00000374811.8	2470	14	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_6	217.568951187227	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGTGTTTGTGAGATG	-21	True	NA	-1	True	AATAAA	-13	NA	65534787	65512581	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_65512902_65514822_65514974_65517986_65518466_65523559_65523708_65524055_65524263_65524563_65524615_65524964_65525051_65528259_65528370_65529211_65529259_65529593_65529879_65531356_65531439_65532560_65532631_65533609_65533736_65534479
H1_mix_00090218	chrX	-	2301	11	FSM	ENSG00000001497.18	ENST00000676986.1	2301	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	240.481371419908	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCCCCAGAGAAAAAATAAAA	-32	True	NA	NA	False	NA	NA	NA	65534798	65520466	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_65521288_65523559_65523708_65524055_65524263_65524964_65525051_65528259_65528370_65529211_65529259_65529593_65529879_65531356_65531439_65532560_65532631_65533609_65533736_65534479
H1_mix_00090220	chrX	-	3069	7	NNC	ENSG00000131080.15	novel	3455	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	8.72576007513895	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTTTATTCCTCTACTT	-4	True	NA	-16	True	AATAAA	-19	NA	66639078	66595636	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_66598094_66599768_66599861_66602723_66602798_66604420_66604507_66605047_66605227_66615933_66616031_66638994
H1_mix_00090221	chrX	-	4687	7	FSM	ENSG00000131080.15	ENST00000451436.6	3464	7	0	-1223	0	1218	multi-exon	FALSE	canonical	3	12	junction_2	9.51168871558685	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGAATATTCCTCAATAAA	-15	True	NA	NA	False	AATGAA	-12	NA	66639298	66594418	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_66598094_66599473_66599861_66602632_66602798_66604420_66604507_66605047_66605227_66615933_66616031_66639200
H1_mix_00090222	chrX	-	1161	1	FSM	ENSG00000228328.2	ENST00000426382.2	1248	1	253	-166	253	166	mono-exon	FALSE	NA	NA	NA	NA	NA	298	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCACCCTGGATTTGCC	NA	False	NA	NA	False	NA	NA	NA	68071514	68070353	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_68070400_68071500
H1_mix_00090223	chrX	-	264	4	FSM	ENSG00000079482.14	ENST00000680417.1	1314	4	43	1007	43	-1007	multi-exon	FALSE	canonical	2	5	junction_1	0.471404520791032	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTTCACAAAGCCTGCC	NA	False	NA	NA	False	AAAAAG	-22	NA	68299028	68234486	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_68234589_68274737_68274810_68283055_68283118_68299000
H1_mix_00090224	chrX	-	1184	3	FSM	ENSG00000079482.14	ENST00000680262.1	964	3	-333	113	-6	-113	multi-exon	FALSE	canonical	0	0	junction_1	5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGCCACTGCGCCTGGC	19	False	68433832	NA	False	NA	NA	NA	68433813	68430697	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_68431078_68432866_68433025_68433167
H1_mix_00090226	chrX	-	2115	3	FSM	ENSG00000181191.12	ENST00000374584.3	2115	3	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	42.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGGAATTTTTTGGTTTT	32	True	NA	-11	True	ATTAAA	-26	NA	69165437	69160853	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_69162382_69162945_69163467_69165371
H1_mix_00090227	chrX	-	2465	2	FSM	ENSG00000181191.12	ENST00000374571.5	2362	2	4	-107	0	97	multi-exon	FALSE	canonical	3	206	junction_1	0	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTTCAACAATTGCAAAAA	20	True	NA	89	True	NA	NA	NA	69165449	69160753	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_69163141_69165371
H1_mix_00090228	chrX	-	2857	2	FSM	ENSG00000181191.12	ENST00000361478.1	2755	2	6	-108	6	97	multi-exon	FALSE	canonical	3	93	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTTCAACAATTGCAAAAA	3	True	NA	89	True	NA	NA	NA	69165515	69160753	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_69163467_69165371
H1_mix_00090230	chrX	-	389	1	FSM	ENSG00000233229.1	ENST00000429006.1	852	1	-47	510	-47	-510	mono-exon	FALSE	NA	NA	NA	NA	NA	249	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACTAACAACATCTGGTAT	NA	False	NA	NA	False	TTTAAA	-43	NA	69938064	69937675	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_69937700_69938100
H1_mix_00090231	chrX	-	993	7	FSM	ENSG00000120509.11	ENST00000239666.9	991	7	0	-2	0	2	multi-exon	FALSE	canonical	3	286	junction_6	39.9781190152813	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTGACTTTTGAATGT	-7	True	NA	-21	True	AGTAAA	-20	NA	70289927	70286592	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_70287117_70287275_70287337_70287731_70287831_70288116_70288174_70288429_70288514_70289254_70289355_70289859
H1_mix_00090234	chrX	-	2239	12	FSM	ENSG00000165349.12	ENST00000374299.8	2239	12	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_11	108.585419778301	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTCCTGTTTTTTGCTT	-1	True	NA	-24	True	AATAAA	-1	NA	70931096	70925578	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_70925944_70926069_70926179_70926526_70926694_70926874_70927042_70927281_70927385_70927483_70927624_70927797_70928021_70928144_70928258_70928455_70928634_70928843_70929003_70929627_70930023_70930976
H1_mix_00090235	chrX	-	2235	12	FSM	ENSG00000165349.12	ENST00000298085.4	2235	12	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_11	123.477103307951	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAAACTGTGTCCTGT	NA	False	NA	-33	True	ATTAAA	-10	NA	70931125	70925587	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_70925944_70926069_70926179_70926526_70926694_70926874_70927042_70927281_70927385_70927483_70927624_70927797_70928021_70928144_70928258_70928455_70928634_70928843_70929003_70929627_70929999_70930976
H1_mix_00090236	chrX	-	3224	1	Genic_Genomic	ENSG00000147164.12	novel	NA	NA	NA	NA	5199	1823	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGCCTTTTACTGTGT	3039	False	NA	60	True	NA	NA	NA	71057732	71054508	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chrX_-_71054500_71057700
H1_mix_00090237	chrX	-	2295	4	FSM	ENSG00000147164.12	ENST00000374274.8	2286	4	0	-9	0	6	multi-exon	FALSE	canonical	3	16	junction_2	1.24721912892465	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGCTTAAGTTGTAAAT	13	True	NA	-16	True	ATTAAA	-24	NA	71068334	71059237	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_71061119_71061842_71061968_71062853_71062950_71068141
H1_mix_00090239	chrX	-	5534	25	FSM	ENSG00000147130.14	ENST00000314425.9	5536	25	0	2	0	0	multi-exon	FALSE	canonical	3	88	junction_11	35.7505827458332	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGTCTTTTCTGGGTG	13	True	NA	-9	True	AATAAA	-13	NA	71254140	71239625	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_71241109_71241226_71241345_71242169_71242425_71242969_71243085_71243828_71243981_71244301_71244471_71244789_71244894_71245338_71245486_71245667_71245843_71245985_71246099_71246352_71246513_71246594_71246693_71247344_71247511_71247733_71247907_71248161_71248313_71248437_71248525_71248685_71248802_71249018_71249170_71249460_71249680_71250025_71250204_71250431_71250727_71251177_71251245_71251557_71251602_71252588_71253275_71254028
H1_mix_00090240	chrX	-	5497	25	NIC	ENSG00000147130.14	novel	6021	25	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_24	41.6869950410863	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGTCTTTTCTGGGTG	722	False	NA	-9	True	AATAAA	-13	NA	71254555	71239625	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_71241109_71241226_71241345_71242169_71242425_71242969_71243085_71243828_71243981_71244301_71244471_71244789_71244894_71245338_71245486_71245667_71245843_71245985_71246099_71246352_71246513_71246594_71246693_71247344_71247511_71247733_71247907_71248161_71248313_71248437_71248525_71248685_71248802_71249018_71249170_71249460_71249680_71250025_71250204_71250431_71250727_71251177_71251245_71251557_71251602_71252588_71253275_71254480
H1_mix_00090241	chrX	-	5451	25	NNC	ENSG00000147130.14	novel	6021	25	NA	NA	-112	0	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_24	39.1045606888336	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGTCTTTTCTGGGTG	7	True	NA	-9	True	AATAAA	-13	NA	71254687	71239625	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_71241109_71241226_71241345_71242169_71242425_71242969_71243085_71243828_71243981_71244301_71244471_71244789_71244894_71245338_71245486_71245667_71245843_71245985_71246099_71246352_71246513_71246594_71246693_71247344_71247511_71247733_71247907_71248161_71248313_71248437_71248525_71248685_71248802_71249018_71249170_71249460_71249680_71250025_71250204_71250431_71250727_71251177_71251245_71251557_71251602_71252588_71253275_71254658
H1_mix_00090243	chrX	-	1862	7	ISM	ENSG00000147130.14	ENST00000314425.9	5536	25	0	9576	0	1	5prime_fragment	FALSE	canonical	3	122	junction_1	18.1536650722535	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCAGCCTCTCCTTCCCC	13	True	NA	1	True	AATAAA	-19	NA	71254140	71249199	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_71249680_71250025_71250204_71250431_71250727_71251177_71251245_71251557_71251602_71252588_71253275_71254028
H1_mix_00090244	chrX	-	2289	1	FSM	ENSG00000213018.2	ENST00000391782.2	432	1	-371	-1486	-371	1486	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTATTCCTCTGTCTA	NA	False	NA	NA	False	NA	NA	NA	71420885	71418596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_71418600_71420900
H1_mix_00090245	chrX	-	266	3	FSM	ENSG00000237265.7	ENST00000433410.1	623	3	364	-7	364	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGGTCTGCCATCTCT	2995	False	NA	0	True	AATAAA	-20	NA	71663907	71662990	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_71663169_71663274_71663317_71663861
H1_mix_00090246	chrX	-	531	5	NNC	ENSG00000283178.1	novel	1552	5	NA	NA	1742	237	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	4.03112887414927	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATATTCTGTGGTCTGTGG	1923	False	NA	NA	False	AATAAA	-8	NA	71871553	71869525	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_71869656_71869761_71869804_71870355_71870402_71870681_71870759_71871317
H1_mix_00090247	chrX	-	4341	2	FSM	ENSG00000242732.4	ENST00000479991.1	4339	2	0	-2	0	2	multi-exon	FALSE	canonical	3	9	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCCTCTTTGTTATTGA	162	False	NA	1	True	AATAAA	-22	NA	72131901	72127107	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_72127711_72128163
H1_mix_00090248	chrX	-	7242	3	FSM	ENSG00000186871.7	ENST00000373657.2	4344	3	-122	-2776	-122	2776	multi-exon	FALSE	canonical	2	8	junction_1	2.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTCCCTTCCTTGCTTTGT	NA	False	NA	NA	False	AATAAA	-6	NA	72239149	72201880	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_72208699_72237830_72237949_72238843
H1_mix_00090249	chrX	-	4226	2	FSM	ENSG00000186871.7	ENST00000334463.4	4218	2	0	-8	0	0	multi-exon	FALSE	canonical	3	138	junction_1	0	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCACTTTGTTTCACTGA	-31	True	NA	-6	True	ATTAAA	-23	NA	72239027	72204656	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_72208699_72238843
H1_mix_00090250	chrX	-	1474	7	FSM	ENSG00000198034.11	ENST00000316084.10	1474	7	0	0	0	0	multi-exon	FALSE	canonical	3	9708	junction_6	1404.93534845321	2322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCGGGTCATGTCAGGC	7	True	NA	85	True	CATAAA	-21	NA	72277248	72272041	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_72272773_72273231_72273390_72273800_72273973_72275052_72275151_72275543_72275725_72276156_72276235_72277192
H1_mix_00090251	chrX	-	1223	3	FSM	ENSG00000125931.11	ENST00000246139.9	1231	3	20	-12	20	0	multi-exon	FALSE	canonical	2	6	junction_2	3	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGAGGTGTTCTTCATTGA	9	True	NA	-1	True	AATAAA	-31	NA	72306967	72301637	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_72302245_72302809_72302935_72306476
H1_mix_00090252	chrX	-	1752	12	FSM	ENSG00000285547.1	ENST00000648922.1	1752	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	69.6720772412265	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTTGGACCGAGCCAATG	-11	True	NA	NA	False	NA	NA	NA	72572843	72301810	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_72302245_72302809_72302935_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
H1_mix_00090253	chrX	-	1754	11	FSM	ENSG00000147099.21	ENST00000373573.9	1754	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	54.634146831446	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTTGTCCCGTTGTCTT	-11	True	NA	-1	True	AATAAA	-16	NA	72572843	72329515	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_72330077_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
H1_mix_00090254	chrX	-	1710	10	FSM	ENSG00000147099.21	ENST00000373583.6	1710	10	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	52.9914971050271	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTTGTCCCGTTGTCTT	201	False	NA	-1	True	AATAAA	-16	NA	72572877	72329515	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_72330077_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
H1_mix_00090255	chrX	-	1796	12	FSM	ENSG00000147099.21	ENST00000647594.1	1785	12	0	-11	0	0	multi-exon	FALSE	canonical	0	0	junction_6	70.6622744099947	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATATCTTTGGTTTTTTT	-33	True	NA	-42	True	NA	NA	NA	72572865	72329556	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_72330077_72330815_72330877_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
H1_mix_00090257	chrX	-	2059	7	FSM	ENSG00000147099.21	ENST00000650126.1	2044	7	0	-15	0	0	multi-exon	FALSE	canonical	3	19	junction_2	74.0645364230112	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTGTCATCATTATTAT	-15	True	NA	-1	True	AATAAA	-18	NA	72572847	72473415	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_72474730_72488932_72489042_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
H1_mix_00090258	chrX	-	747	5	FSM	ENSG00000147099.21	ENST00000650636.1	747	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	82.0041919660209	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTCGTATAATGACTT	16	True	NA	0	True	TATAAA	-17	NA	72572816	72562219	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_72562475_72567888_72568031_72568753_72568885_72572056_72572110_72572650
H1_mix_00090259	chrX	-	749	5	FSM	ENSG00000147099.21	ENST00000373556.8	747	5	0	-2	0	2	multi-exon	FALSE	canonical	3	27	junction_1	71.2916544905503	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTCTAAATTCCTTTTC	-24	True	NA	3	True	AATAAA	-23	NA	72572856	72567579	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_72567797_72567888_72568031_72568753_72568885_72572056_72572110_72572650
H1_mix_00090261	chrX	-	5349	27	ISM	ENSG00000067177.15	ENST00000339490.7	6121	31	29612	6	29612	-6	3prime_fragment	FALSE	canonical	3	25	junction_18	7.88827307279647	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCACATGTGTTTTTGT	NA	False	NA	-8	True	AATAAA	-45	NA	72684569	72578820	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_72581176_72582397_72582599_72584248_72584303_72593103_72593275_72602157_72602274_72603118_72603221_72605270_72605401_72605540_72605620_72609623_72609704_72611027_72611185_72618709_72618850_72619213_72619306_72620724_72620902_72623108_72623276_72626970_72627050_72635154_72635300_72636276_72636387_72644361_72644497_72650389_72650469_72652543_72652652_72653434_72653531_72656119_72656243_72657587_72657642_72666150_72666298_72667374_72667474_72676069_72676151_72684497
H1_mix_00090262	chrX	-	711	3	ISM	ENSG00000067177.15	ENST00000373539.3	4476	33	-63	124586	-2	-124586	5prime_fragment	FALSE	canonical	3	36	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATGATCAGACAGGTATG	-16	True	NA	NA	False	NA	NA	NA	72714321	72705212	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_72705246_72712778_72712938_72713802
H1_mix_00090263	chrX	-	2044	1	FSM	ENSG00000204118.2	ENST00000373518.1	2044	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTAGCCTTCTCATTGAG	0	True	NA	-9	True	AATAAA	-17	NA	73128080	73126036	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_73126000_73128100
H1_mix_00090264	chrX	-	2596	1	FSM	ENSG00000186462.9	ENST00000373517.4	2553	1	-46	3	-46	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTAATGTATTTCTTGT	NA	False	NA	-1	True	AATAAA	-33	NA	73214897	73212301	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_73212300_73214900
H1_mix_00090267	chrX	-	8279	6	FSM	ENSG00000230590.12	ENST00000652331.2	1996	6	15	-6298	0	2	multi-exon	FALSE	canonical	3	9	junction_1	20.202970078679	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTTATTTTCTTATTGTT	-5	True	NA	NA	False	AATAAA	-26	NA	74293553	74196348	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_74203954_74274341_74274411_74280393_74280495_74280930_74281086_74281701_74281849_74293351
H1_mix_00090268	chrX	-	4269	1	NIC	ENSG00000230590.12	novel	8347	7	NA	NA	37649	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTGCAGGTTTTTGTG	NA	False	NA	NA	False	AATAAA	-14	NA	74204499	74200230	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_74200200_74204500
H1_mix_00090269	chrX	-	3685	1	FSM	ENSG00000271533.1	ENST00000604070.1	3685	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAATCACTTTTTAAAAA	6195	False	NA	-24	True	TTTAAA	-31	NA	74213660	74209975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_74210000_74213700
H1_mix_00090272	chrX	-	6556	1	NIC	ENSG00000230590.12	novel	1578	4	NA	NA	-3142	-10388	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTTATTTCAATGTTAC	3294	False	NA	NA	False	NA	NA	NA	74264665	74258109	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_74258100_74264700
H1_mix_00090276	chrX	-	10925	5	FSM	ENSG00000131263.13_ENSG00000230673.3	ENST00000349225.2	3478	5	9	-7456	9	314	multi-exon	FALSE	canonical	3	40	junction_4	46.0814496299758	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAACAAAAATTGGGGAA	22	False	NA	NA	False	AATAAA	-23	NA	74614608	74582661	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_74593062_74594305_74594390_74595808_74596001_74612581_74612644_74614421
H1_mix_00090277	chrX	-	10549	4	FSM	ENSG00000131263.13	ENST00000332687.11	10565	4	16	0	9	0	multi-exon	FALSE	canonical	3	80	junction_3	26.6207938774685	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTATGTACCGAGCAAATG	22	False	NA	NA	False	TATAAA	-15	NA	74614608	74582975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_74593062_74594305_74594390_74595808_74596001_74614421
H1_mix_00090278	chrX	-	4612	16	FSM	ENSG00000131269.19	ENST00000253577.9	4595	16	0	-17	0	17	multi-exon	FALSE	canonical	3	101	junction_15	40.7899769823694	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAAATTTTGCTTCTTTGT	0	True	NA	10	True	AATAAA	-37	NA	75156283	75051030	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_75053586_75060222_75060331_75062327_75062432_75065069_75065242_75069006_75069137_75069290_75069455_75070364_75070523_75071508_75071684_75073688_75073777_75073867_75073957_75075361_75075631_75076521_75076655_75098941_75099062_75112885_75112973_75114753_75114835_75156104
H1_mix_00090281	chrX	-	876	4	ISM	ENSG00000102383.14	ENST00000373367.8	5578	12	0	81891	0	51174	5prime_fragment	FALSE	canonical	3	39	junction_2	5.31245915016974	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTGTCATGCCTCATTT	-7	True	NA	NA	False	AATAAA	-19	NA	75523037	75450317	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_75450923_75478890_75478986_75505820_75505848_75522888
H1_mix_00090282	chrX	-	6081	1	FSM	ENSG00000215105.4	ENST00000399586.2	6081	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACACTTCACTAAAGCGTC	240	False	NA	NA	False	NA	NA	NA	75746911	75740830	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_75740800_75746900
H1_mix_00090283	chrX	-	11170	35	FSM	ENSG00000085224.23	ENST00000373344.11	11165	35	0	-5	0	5	multi-exon	FALSE	canonical	3	41	junction_29	139.750605844519	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTCAAAGCTCAATATGT	-2	True	NA	NA	False	AATAAA	-23	NA	77786216	77504874	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_77508630_77520787_77520917_77521402_77521499_77522262_77522389_77523251_77523402_77557450_77557646_77558668_77558847_77574249_77574359_77589833_77589941_77593695_77593850_77599410_77599581_77599731_77599821_77600433_77600565_77616612_77616731_77618805_77618982_77620394_77620533_77633206_77633385_77633565_77633713_77634593_77634704_77635914_77636057_77652113_77652354_77654097_77654201_77656559_77656654_77663381_77663559_77664644_77664779_77676225_77676299_77681519_77684594_77684938_77685007_77688817_77688928_77693823_77693938_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
H1_mix_00090284	chrX	-	5847	18	FSM	ENSG00000085224.23	ENST00000675732.1	5847	18	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_10	52.8473023932368	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCTCTTTATTGTATTT	NA	False	NA	-31	True	AATAAA	-15	NA	77634251	77505712	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_77508630_77520787_77520917_77521402_77521499_77522262_77522389_77523251_77523402_77557450_77557646_77558668_77558847_77574249_77574359_77589833_77589941_77593695_77593850_77599410_77599581_77599731_77599821_77600433_77600565_77616612_77616731_77618805_77618982_77620394_77620533_77633206_77633385_77633565
H1_mix_00090285	chrX	-	10218	34	FSM	ENSG00000085224.23	ENST00000395603.7	10218	34	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_29	139.883383150189	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCTCTTTATTGTATTT	-2	True	NA	-31	True	AATAAA	-15	NA	77786216	77505712	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_77508630_77520787_77520917_77521402_77521499_77522262_77522389_77523251_77523402_77557450_77557646_77558668_77558847_77574249_77574359_77589833_77589941_77593695_77593850_77599410_77599581_77599731_77599821_77600433_77600565_77616612_77616731_77618805_77618982_77620394_77620533_77633206_77633385_77633565_77633713_77634593_77634704_77635914_77636057_77652113_77652354_77654097_77654201_77656559_77656654_77663381_77663559_77664644_77664779_77676225_77676299_77681519_77684594_77684938_77685007_77688817_77688928_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
H1_mix_00090290	chrX	-	814	5	FSM	ENSG00000085224.23	ENST00000400866.4	814	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	146.770228588771	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTGTTTCTCAGTTAT	909	False	NA	-2	True	AATAAA	-21	NA	77633321	77616244	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_77616512_77616612_77616731_77618805_77618982_77620394_77620533_77633206
H1_mix_00090297	chrX	-	4439	10	FSM	ENSG00000102158.22	ENST00000618282.5	4506	10	0	67	0	-67	multi-exon	FALSE	canonical	3	190	junction_1	12.9099444873581	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTAGTAGTCCTTCCTGC	3	True	NA	NA	False	AGTAAA	-18	NA	77895435	77825813	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_77829236_77830804_77830896_77841245_77841321_77853900_77853965_77855500_77855591_77856732_77856874_77857356_77857498_77870807_77870926_77875427_77875598_77895308
H1_mix_00090298	chrX	-	1494	1	FSM	ENSG00000226784.3	ENST00000458128.3	1690	1	99	97	99	-97	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCACATGGGCCCAGTGT	109	False	NA	NA	False	NA	NA	NA	77969539	77968045	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_77968000_77969500
H1_mix_00090299	chrX	-	2707	7	FSM	ENSG00000187325.5	ENST00000341864.6	2657	7	0	-50	0	50	multi-exon	FALSE	canonical	3	523	junction_1	58.8607112880343	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGATGGCCAAAGACCAG	-14	True	NA	29	True	NA	NA	NA	78139650	78129697	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_78131774_78133337_78133449_78136914_78136991_78137748_78137884_78137961_78138099_78138842_78138925_78139560
H1_mix_00090300	chrX	-	1619	6	FSM	ENSG00000078596.11	ENST00000373298.7	1616	6	0	-3	0	3	multi-exon	FALSE	canonical	3	276	junction_1	13.5292276202302	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTCTTTTATTTCATCA	10	True	NA	-1	True	AATAAA	-19	NA	79367334	79360380	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_79361178_79361328_79361480_79362580_79362692_79362941_79363140_79363422_79363555_79367104
H1_mix_00090301	chrX	-	1705	5	FSM	ENSG00000078596.11	ENST00000434584.2	1698	5	0	-7	0	3	multi-exon	FALSE	canonical	3	59	junction_4	102.655978880921	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTCTTTTATTTCATCA	NA	False	NA	-1	True	AATAAA	-19	NA	79367552	79360380	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_79361178_79361328_79361480_79362580_79362692_79362941_79363140_79367104
H1_mix_00090302	chrX	-	6792	6	FSM	ENSG00000278530.5	ENST00000614414.4	6813	6	16	5	16	-5	multi-exon	TRUE	non_canonical	0	0	junction_5	6.22896460095897	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCATTTTGTTTTTTTCTT	-1	True	NA	-10	True	AATAAA	-13	NA	80335348	80228493	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_80234591_80288905_80289058_80289663_80289772_80290877_80291025_80310078_80310234_80335215
H1_mix_00090303	chrX	-	14237	29	ISM	ENSG00000165288.11	ENST00000373275.5	12921	41	77958	-950	2226	950	3prime_fragment	TRUE	canonical	3	25	junction_26	11.365619029264	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTAGTGCTTTGGAATT	NA	False	NA	-1	True	AATAAA	-28	NA	80731919	80668552	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_80677364_80681340_80681500_80681996_80682095_80682464_80682629_80684009_80684163_80685461_80685537_80686862_80687004_80688068_80688126_80689767_80689847_80689966_80690093_80691052_80691174_80691822_80691979_80692088_80692151_80692939_80693052_80695907_80695991_80696738_80696864_80699956_80700065_80703479_80703594_80704677_80704847_80707426_80707504_80709427_80709578_80716156_80716251_80717572_80717760_80719488_80719657_80722561_80722788_80723747_80723877_80724932_80725068_80728751_80728906_80729915
H1_mix_00090304	chrX	-	12842	41	FSM	ENSG00000165288.11	ENST00000373275.5	12921	41	67	12	67	-12	multi-exon	TRUE	canonical	2	8	junction_31	15.3065345522754	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAATAATGAAGTGCTGGT	60	False	NA	-31	True	NA	NA	NA	80809810	80669514	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_80677364_80681340_80681500_80681996_80682095_80682464_80682629_80684009_80684163_80685461_80685537_80686862_80687004_80688068_80688126_80689767_80689847_80689966_80690093_80691052_80691174_80691822_80691979_80692088_80692151_80692939_80693052_80695907_80695991_80696738_80696864_80699956_80700065_80703479_80703594_80704677_80704847_80707426_80707504_80709427_80709578_80716156_80716251_80717572_80717760_80719488_80719657_80722561_80722788_80723747_80723877_80724932_80725068_80728751_80728906_80729915_80730021_80733455_80733497_80734117_80734219_80735126_80735198_80735987_80736089_80744031_80744254_80745568_80745730_80791853_80791953_80793621_80793773_80808538_80808599_80809012_80809043_80809245_80809305_80809440
H1_mix_00090305	chrX	-	2787	6	FSM	ENSG00000198157.11	ENST00000430960.5	578	6	-65	-2144	-60	789	multi-exon	TRUE	canonical	3	303	junction_4	20.5951450589696	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCAAGTTTTTTTTGTG	NA	False	NA	-6	True	TATAAA	-21	NA	81121748	81112909	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_81115231_81116203_81116342_81118431_81118486_81118729_81118760_81119787_81119818_81121534
H1_mix_00090309	chrX	-	263	1	FSM	ENSG00000279437.1	ENST00000625081.1	3192	1	1241	1688	1241	-1688	mono-exon	FALSE	NA	NA	NA	NA	NA	309	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTCCAATAAGAACATTT	2478	False	NA	NA	False	AATAAA	-12	NA	83507973	83507710	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_83507700_83508000
H1_mix_00090310	chrX	-	1260	1	FSM	ENSG00000215102.2	ENST00000399580.2	1115	1	-145	0	-145	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGATTGTGTTTGTAAAA	NA	False	NA	NA	False	AGTAAA	-23	NA	83750084	83748824	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_83748800_83750100
H1_mix_00090311	chrX	-	8739	22	FSM	ENSG00000072133.11	ENST00000262752.5	8465	22	-272	-2	-272	-2	multi-exon	FALSE	canonical	3	63	junction_5	9.79957887012223	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACCGTTGACCTCGCTTG	16	True	NA	-9	True	AATAAA	-23	NA	84188471	84058347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_84064403_84064970_84065112_84096193_84096312_84097771_84097849_84102036_84102199_84104498_84104658_84105786_84105877_84106364_84106488_84106909_84107041_84107622_84107726_84116228_84116288_84117059_84117149_84117383_84117455_84119884_84120028_84134781_84134820_84135103_84135211_84145477_84145558_84146977_84147059_84148041_84148124_84156074_84156192_84164327_84164388_84187818
H1_mix_00090312	chrX	-	6200	10	FSM	ENSG00000165259.14	ENST00000297977.9	6200	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	7.56372107783	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTATTTCTTTATTTTAA	6	True	NA	NA	False	AATAAA	-19	NA	84502453	84317873	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_84322015_84326177_84326301_84333758_84333843_84336800_84336881_84344249_84344458_84361465_84361613_84440531_84440586_84468471_84469576_84475250_84475398_84502341
H1_mix_00090313	chrX	-	6158	10	FSM	ENSG00000165259.14	ENST00000506585.6	6158	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	13.5728487143349	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACATCTATTTCTTTATT	6	True	NA	NA	False	AATAAA	-15	NA	84502453	84317877	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_84322015_84326177_84326301_84333758_84333843_84336800_84336881_84344249_84344458_84361465_84361613_84440531_84440586_84468471_84469576_84488023_84488133_84502341
H1_mix_00090314	chrX	-	6305	11	FSM	ENSG00000165259.14	ENST00000373177.3	6305	11	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_9	13.4762754498415	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACATCTATTTCTTTATT	6	True	NA	NA	False	AATAAA	-15	NA	84502453	84317877	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_84322015_84326177_84326301_84333758_84333843_84336800_84336881_84344249_84344458_84361465_84361613_84440531_84440586_84468471_84469576_84475250_84475398_84488023_84488133_84502341
H1_mix_00090315	chrX	-	3707	3	FSM	ENSG00000184788.14	ENST00000647304.1	3707	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	12	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTCAAACAAATTTACAAG	NA	False	NA	NA	False	NA	NA	NA	85243870	85208775	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_85212078_85224204_85224327_85243587
H1_mix_00090316	chrX	-	5438	15	FSM	ENSG00000188419.14	ENST00000357749.7	5438	15	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_4	10.1672242514657	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGGTGTCATATTTTGT	-12	True	NA	-1	True	AATAAA	-20	NA	86047558	85861179	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_85864822_85873051_85873213_85878964_85879064_85894187_85894285_85900645_85900710_85901083_85901189_85911260_85911339_85956152_85956379_85957854_85957976_85958860_85958978_85963664_85964053_85978766_85978892_85981736_85981810_86027490_86027558_86047483
H1_mix_00090319	chrX	-	1014	1	FSM	ENSG00000237506.3	ENST00000448168.1	861	1	-82	-71	-82	71	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAATAAAATTACTT	NA	False	NA	NA	False	AATAAA	-17	NA	87704285	87703271	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_87703300_87704300
H1_mix_00090320	chrX	-	4904	2	NNC	ENSG00000289479.1	novel	1764	2	NA	NA	-773	2384	at_least_one_novel_splicesite	FALSE	canonical	3	644	junction_1	0	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTATAAGTAATCTAGAAAT	-2	False	NA	NA	False	AATACA	-41	NA	92105541	92097891	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_92100701_92103446
H1_mix_00090321	chrX	-	7380	1	Genic_Genomic	ENSG00000289479.1	novel	NA	NA	NA	NA	-766	2121	mono-exon	FALSE	NA	NA	NA	NA	NA	453	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATAAGATATCGTCTGCT	5	False	NA	NA	False	AATAAA	-18	NA	92105534	92098154	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chrX_-_92098200_92105500
H1_mix_00090322	chrX	-	1264	1	FSM	ENSG00000229132.2	ENST00000428832.2	1216	1	9	-57	9	57	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGCAGGAGAGGGGAAGG	1308	False	NA	NA	False	GGGGCT	-5	NA	92114452	92113188	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_92113200_92114500
H1_mix_00090323	chrX	-	781	1	FSM	ENSG00000234322.1	ENST00000456632.1	1027	1	287	-41	287	41	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGATCACCTTATGGATG	NA	False	NA	NA	False	GATAAA	-27	NA	93288472	93287691	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_93287700_93288500
H1_mix_00090324	chrX	-	2652	1	FSM	ENSG00000186310.10	ENST00000373079.4	2649	1	0	-3	0	3	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTTTCTCCTGACTATA	8	True	NA	NA	False	AATAAA	-34	NA	93673578	93670926	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_93670900_93673600
H1_mix_00090326	chrX	-	2129	3	Intergenic	novelGene_1686	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	3.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTGCTTCCTCTTCCCC	NA	False	NA	NA	False	NA	NA	NA	94698561	94674119	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_94676067_94697895_94698010_94698493
H1_mix_00090327	chrX	-	3897	3	Intergenic	novelGene_1687	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	21	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTTTCACACTGCTGAT	NA	False	NA	40	True	NA	NA	NA	94704258	94691470	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_94693002_94697895_94698010_94702006
H1_mix_00090328	chrX	-	1058	2	Intergenic	novelGene_1697	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCTTCCTCCACAACTCA	NA	False	NA	NA	False	NA	NA	NA	99164932	99161956	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_99162721_99164638
H1_mix_00090330	chrX	-	3768	8	FSM	ENSG00000000003.15	ENST00000373020.9	3768	8	0	0	0	0	multi-exon	FALSE	canonical	3	986	junction_3	79.2750314553384	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATACCATTTCTGGTTTT	0	True	NA	-33	True	AATAAA	-17	NA	100636806	100627107	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_100629987_100630758_100630867_100632484_100632569_100633404_100633540_100633930_100634030_100635177_100635253_100635557_100635747_100636607
H1_mix_00090333	chrX	-	3557	14	FSM	ENSG00000188917.15	ENST00000372936.4	3547	14	0	-10	0	6	multi-exon	FALSE	canonical	2	16	junction_12	33.0230330233183	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTCTAGTCCATGATTT	-9	True	NA	-1	True	AATAAA	-29	NA	101052111	101009339	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101010708_101018970_101019071_101019283_101019404_101020486_101020589_101021100_101021316_101021967_101022063_101023469_101023617_101035612_101035684_101036973_101037074_101037916_101038052_101041316_101041372_101042041_101042313_101051250_101051734_101051816
H1_mix_00090334	chrX	-	2921	14	FSM	ENSG00000188917.15	ENST00000372935.5	2921	14	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_12	33.4816031796461	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGTAGTTATCCCTAG	0	True	NA	NA	False	NA	NA	NA	101052070	101009541	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101010708_101018970_101019071_101019283_101019404_101020486_101020589_101021100_101021316_101021967_101022063_101023469_101023617_101035612_101035684_101036973_101037074_101037916_101038052_101041316_101041372_101042041_101042313_101051643_101051734_101051816
H1_mix_00090335	chrX	-	771	7	FSM	ENSG00000188917.15	ENST00000478422.1	771	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	38.6123900667476	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCCCTGCCTTGTATTT	20	False	NA	NA	False	NA	NA	NA	101052082	101023585	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101023617_101035612_101035684_101036973_101037074_101037916_101038052_101041316_101041372_101042232_101042313_101051783
H1_mix_00090336	chrX	-	1847	11	FSM	ENSG00000102387.16	ENST00000324762.10	2107	11	260	0	260	0	multi-exon	FALSE	canonical	0	0	junction_3	0.640312423743285	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTGTTGTCAATTTATT	5537	False	NA	NA	False	AATAAA	-19	NA	101287545	101268256	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101269238_101275221_101275282_101275999_101276113_101277605_101277720_101278048_101278122_101278993_101279036_101281719_101281776_101282326_101282454_101283449_101283584_101286574_101286654_101287477
H1_mix_00090337	chrX	-	1218	2	FSM	ENSG00000126953.8	ENST00000372902.4	1210	2	0	-8	0	8	multi-exon	FALSE	canonical	3	330	junction_1	0	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGAAGGCATCCTATTGC	-29	True	NA	-10	True	AATAAA	-26	NA	101348742	101345652	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101346661_101348532
H1_mix_00090338	chrX	-	3093	2	FSM	ENSG00000126953.8	ENST00000644112.2	2951	2	-15	-127	-15	127	multi-exon	FALSE	canonical	3	22	junction_1	0	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATTCCAGGGGTTCCTGA	9597	False	NA	NA	False	NA	NA	NA	101348757	101345533	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101348402_101348532
H1_mix_00090339	chrX	-	1432	6	FSM	ENSG00000102393.14	ENST00000466414.2	1431	6	0	-1	0	0	multi-exon	FALSE	canonical	3	232	junction_2	30.8090895678532	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTATTGCCAACTACTA	860	False	NA	-34	True	ATTAAA	-20	NA	101407822	101397802	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101398100_101398369_101398947_101400665_101400758_101401631_101401810_101403810_101403986_101407709
H1_mix_00090340	chrX	-	1318	7	FSM	ENSG00000102393.14	ENST00000218516.4	1318	7	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_2	32.3698247686878	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTATTGCCAACTACTA	-10	True	NA	-34	True	ATTAAA	-20	NA	101407925	101397802	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101398100_101398369_101398568_101398784_101398947_101400665_101400758_101401631_101401810_101403810_101403986_101407709
H1_mix_00090341	chrX	-	1256	7	FSM	ENSG00000102393.14	ENST00000676156.1	1254	7	0	-2	0	0	multi-exon	FALSE	canonical	0	0	junction_4	100.73011245678	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTATTTTATTGCCAACT	12	True	NA	-38	True	ATTAAA	-16	NA	101407903	101397806	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101398100_101398369_101398568_101398784_101398947_101400665_101400758_101401667_101401810_101403810_101403986_101407709
H1_mix_00090342	chrX	-	1367	3	ISM	ENSG00000102393.14	ENST00000674634.2	1089	6	2	2530	0	-2530	5prime_fragment	FALSE	canonical	3	259	junction_1	31.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGGAAATTCATTTCTT	14	True	NA	-7	True	AATAAA	-30	NA	101407901	101400809	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_101401810_101403810_101403986_101407709
H1_mix_00090343	chrX	-	1590	1	FSM	ENSG00000237682.2	ENST00000392722.3	1792	1	234	-32	234	32	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTTGCCATTTAATGCA	NA	False	NA	NA	False	NA	NA	NA	101539042	101537452	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101537500_101539000
H1_mix_00090344	chrX	-	848	4	FSM	ENSG00000198960.11	ENST00000497931.5	846	4	0	-2	0	2	multi-exon	FALSE	canonical	3	122	junction_1	22.4251842554055	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTCCTTGTCCTTGAGT	56	False	NA	NA	False	AATAAA	-30	NA	101617910	101615115	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101615761_101616671_101616767_101617502_101617585_101617884
H1_mix_00090345	chrX	-	1849	3	FSM	ENSG00000198960.11	ENST00000361910.9	1840	3	0	-9	0	2	multi-exon	FALSE	canonical	3	168	junction_2	1.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTCCTTGTCCTTGAGT	-34	True	NA	NA	False	AATAAA	-30	NA	101618000	101615115	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101616767_101617502_101617585_101617884
H1_mix_00090346	chrX	-	1937	4	FSM	ENSG00000198960.11	ENST00000539247.5	1928	4	1	-10	0	2	multi-exon	FALSE	canonical	2	7	junction_1	74.7454941042528	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTCCTTGTCCTTGAGT	-34	True	NA	NA	False	AATAAA	-30	NA	101618000	101615115	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101616767_101617282_101617371_101617502_101617585_101617884
H1_mix_00090347	chrX	-	556	4	NNC	ENSG00000198960.11	novel	846	4	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	73.3136337176714	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCATGGTCCTTGTCCTTG	52	False	NA	NA	False	AATAAA	-27	NA	101617914	101615118	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_101615468_101616671_101616767_101617502_101617585_101617884
H1_mix_00090348	chrX	-	2663	3	FSM	ENSG00000184867.14	ENST00000330154.6	2663	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	132	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGTTCTAATGCTTGAATT	1200	False	NA	-3	True	AATAAA	-25	NA	101658649	101655280	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101657716_101658072_101658143_101658491
H1_mix_00090349	chrX	-	2826	6	FSM	ENSG00000184867.14	ENST00000356824.9	2819	6	0	-7	0	7	multi-exon	FALSE	canonical	3	205	junction_4	41.5230056715551	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGCTTGAATTTAAAACC	-1	True	NA	4	True	AATAAA	-32	NA	101659850	101655273	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101657716_101658072_101658143_101658460_101658526_101659075_101659149_101659418_101659502_101659757
H1_mix_00090350	chrX	-	914	5	FSM	ENSG00000184867.14	ENST00000413506.5	914	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	114.2702389076	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGCGGAGACTTCCAGG	15	False	NA	NA	False	GGGGCT	-23	NA	101659834	101657086	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101657716_101658072_101658143_101658460_101658526_101659075_101659149_101659757
H1_mix_00090351	chrX	-	821	6	FSM	ENSG00000184867.14	ENST00000440675.5	821	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	110.608498769308	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCTCAGAGTGGGGCAG	14	False	NA	NA	False	NA	NA	NA	101659835	101657274	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101657716_101658072_101658143_101658460_101658526_101659075_101659149_101659407_101659502_101659757
H1_mix_00090354	chrX	-	782	3	FSM	ENSG00000184515.11	ENST00000333643.4	777	3	0	-5	0	1	multi-exon	FALSE	canonical	3	129	junction_1	3.5	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATAGACTATTTCATTTA	-17	True	NA	-17	True	AATAAA	-20	NA	102155977	102153706	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_102154303_102154743_102154811_102155858
H1_mix_00090356	chrX	-	642	3	FSM	ENSG00000158164.7	ENST00000289373.5	634	3	0	-8	0	8	multi-exon	TRUE	canonical	3	1351	junction_1	27	242	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTGGTTGACTCTTGG	11	True	NA	-4	True	AATAAA	-28	NA	102516739	102513673	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_102514125_102515063_102515181_102516665
H1_mix_00090357	chrX	-	237	1	FSM	ENSG00000176318.8	ENST00000325117.8	1480	1	525	718	525	-718	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAGGGCCATGGGACTCC	NA	False	NA	NA	False	NA	NA	NA	102547688	102547451	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_102547500_102547700
H1_mix_00090358	chrX	-	796	3	FSM	ENSG00000133169.6	ENST00000372728.4	795	3	0	-1	0	1	multi-exon	FALSE	canonical	3	808	junction_2	19.5	451	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTATATTCTTTTTTTGTT	0	True	NA	-4	True	AATAAA	-19	NA	103064171	103062649	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_103063280_103063641_103063732_103064095
H1_mix_00090359	chrX	-	1181	3	FSM	ENSG00000180964.17	ENST00000372685.8	1174	3	0	-7	0	7	multi-exon	FALSE	canonical	3	848	junction_1	28	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGACTCAGTCTTTTCAT	-3	True	NA	NA	False	AATAAA	-27	NA	103255155	103252987	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_103254018_103254604_103254678_103255077
H1_mix_00090360	chrX	-	1183	3	FSM	ENSG00000204065.3	ENST00000372680.2	1046	3	-139	2	-139	-2	multi-exon	TRUE	canonical	3	58	junction_2	9.5	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATACAGTATCAGCCCAT	113	False	NA	-3	True	AATAAA	-19	NA	103276889	103273692	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_103274591_103275274_103275343_103276672
H1_mix_00090361	chrX	-	1086	3	FSM	ENSG00000133134.12	ENST00000536889.1	1077	3	0	-9	0	1	multi-exon	FALSE	canonical	3	102	junction_2	233.5	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCATTCTTTTTTACT	10	True	NA	-20	True	AATAAA	-18	NA	103310955	103309344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_103309982_103310357_103310434_103310582
H1_mix_00090362	chrX	-	844	3	FSM	ENSG00000133134.12	ENST00000372677.8	843	3	0	-1	0	1	multi-exon	FALSE	canonical	3	497	junction_2	36	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCATTCTTTTTTACT	19	False	103311009	-20	True	AATAAA	-18	NA	103310990	103309344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_103309982_103310357_103310434_103310859
H1_mix_00090363	chrX	-	668	3	FSM	ENSG00000133134.12	ENST00000372674.5	668	3	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	249	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTACCTATTTCTTGTGGG	2	True	NA	NA	False	NA	NA	NA	103311007	103309501	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_103309982_103310357_103310434_103310895
H1_mix_00090364	chrX	-	1830	3	FSM	ENSG00000123562.18	ENST00000451301.5	1830	3	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	916	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAATTTGTAGTGTGCCT	1283	False	NA	-7	True	AATAAA	-23	NA	103686818	103675499	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_103677052_103685170_103685261_103686630
H1_mix_00090365	chrX	-	1866	4	FSM	ENSG00000123562.18	ENST00000441076.7	1866	4	0	0	0	0	multi-exon	FALSE	canonical	3	561	junction_2	674.720847626796	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTTGTAGTGTGCCTTT	8	True	NA	-5	True	AATAAA	-25	NA	103686699	103675497	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_103677052_103678498_103678652_103685170_103685261_103686630
H1_mix_00090366	chrX	-	1886	5	FSM	ENSG00000123562.18	ENST00000422355.5	562	5	0	-1324	0	-2	multi-exon	FALSE	canonical	3	40	junction_2	857.88967093677	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTAATTTGTAGTGTGC	2	True	NA	-9	True	AATAAA	-21	NA	103686705	103675501	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_103677052_103678498_103678621_103684680_103684730_103685170_103685261_103686630
H1_mix_00090367	chrX	-	1822	4	FSM	ENSG00000123562.18	ENST00000360458.5	1824	4	0	2	0	0	multi-exon	FALSE	canonical	3	245	junction_3	743.615641458827	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTTGTAGTGTGCCTTT	-6	True	NA	-5	True	AATAAA	-25	NA	103688064	103675497	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_103677052_103678498_103678601_103685170_103685261_103687988
H1_mix_00090368	chrX	-	1965	4	FSM	ENSG00000123562.18	ENST00000433176.6	1965	4	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_3	787.978144084946	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAATTTGTAGTGTGCCT	NA	False	NA	-7	True	AATAAA	-23	NA	103688158	103675499	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_103677052_103678498_103678652_103685170_103685261_103687988
H1_mix_00090370	chrX	-	1692	3	FSM	ENSG00000123562.18	ENST00000492116.5	582	3	84	-1194	0	0	multi-exon	FALSE	canonical	3	92	junction_1	76.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAATTTGTAGTGTGCCT	20	True	NA	-7	True	AATAAA	-23	NA	103688038	103675499	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_103677052_103685170_103685261_103687988
H1_mix_00090371	chrX	-	573	3	FSM	ENSG00000123562.18	ENST00000474653.5	573	3	0	0	0	0	multi-exon	FALSE	canonical	3	950	junction_2	551	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCAGGAAAGAAGACAGCT	2596	False	NA	NA	False	AGTAAA	-14	NA	103685505	103676915	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_103677052_103678498_103678601_103685170
H1_mix_00090372	chrX	-	451	4	FSM	ENSG00000123562.18	ENST00000498064.1	451	4	0	0	0	0	multi-exon	FALSE	canonical	3	950	junction_2	492.100260787034	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAGAGAACTTCAAAAAA	1285	False	NA	NA	False	NA	NA	NA	103686816	103676978	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_103677052_103678498_103678601_103685170_103685261_103686630
H1_mix_00090373	chrX	-	1443	7	FSM	ENSG00000188828.13	ENST00000480725.2	2063	7	363	257	-58	-257	multi-exon	FALSE	canonical	0	0	junction_6	0.74535599249993	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCGCTCTAGAGATATTA	233	False	NA	NA	False	NA	NA	NA	103728261	103718604	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_103719272_103722151_103722293_103723855_103723939_103724077_103724302_103724540_103724609_103724897_103725029_103728132
H1_mix_00090374	chrX	-	786	3	NIC	ENSG00000288597.1	novel	2186	12	NA	NA	1582	-1	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	54	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGTTTGGTGATTTCAC	-3	True	NA	-1	True	ATTAAA	-21	NA	103767033	103761192	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_103761536_103764961_103765155_103766783
H1_mix_00090375	chrX	-	1628	3	ISM	ENSG00000288597.1	ENST00000674274.1	2186	12	65205	-843	1587	843	3prime_fragment	FALSE	canonical	3	37	junction_1	56	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	2	True	NA	NA	False	NA	NA	NA	103767028	103760348	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_103761539_103764961_103765155_103766783
H1_mix_00090376	chrX	-	3899	2	FSM	ENSG00000288597.1	ENST00000674403.1	4080	2	181	0	181	0	multi-exon	FALSE	canonical	3	149	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAATCTCTCTTATTTA	8278	False	NA	NA	False	AATAAA	-8	NA	103768434	103762906	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_103765155_103766783
H1_mix_00090377	chrX	-	3703	3	FSM	ENSG00000123570.4	ENST00000243298.3	3772	3	38	31	38	-31	multi-exon	FALSE	canonical	2	4	junction_2	2	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATAAAAAGTGCATTTTG	23	True	NA	NA	False	NA	NA	NA	103832219	103822357	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_103825827_103827004_103827079_103832059
H1_mix_00090378	chrX	-	1831	4	FSM	ENSG00000231728.5	ENST00000653685.2	1918	4	0	87	0	-87	multi-exon	FALSE	canonical	2	6	junction_1	1.4142135623731	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCAGTTTTCATATCTG	9	True	NA	NA	False	NA	NA	NA	103919088	103880732	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_103882116_103918086_103918226_103918408_103918461_103918831
H1_mix_00090379	chrX	-	2286	3	FSM	ENSG00000269226.7	ENST00000620307.4	2286	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	119	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGAAGGGTATTTTTTA	NA	False	NA	NA	False	AATAAA	-25	NA	104076194	104063870	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_104065985_104074240_104074358_104076139
H1_mix_00090380	chrX	-	642	3	FSM	ENSG00000269226.7	ENST00000598087.3	947	3	0	305	0	-305	multi-exon	FALSE	canonical	3	244	junction_2	9.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGGTTCATTCTGGTG	NA	False	NA	NA	False	AATAAA	-28	NA	104076212	104072872	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_104073325_104074240_104074358_104076139
H1_mix_00090381	chrX	-	741	4	NNC	ENSG00000269226.7	novel	947	3	NA	NA	-32	-305	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_3	104.512625499931	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGGTTCATTCTGGTG	NA	False	NA	NA	False	AATAAA	-28	NA	104076244	104072872	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_104073325_104074240_104074358_104074568_104074636_104076139
H1_mix_00090382	chrX	-	4491	2	NNC	ENSG00000269743.3	novel	6207	2	NA	NA	44553	-1704	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	0	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAATGGAATTGGAGTAC	NA	False	NA	NA	False	NA	NA	NA	104112435	104100917	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_104105289_104112315
H1_mix_00090383	chrX	-	731	2	FSM	ENSG00000269743.3	ENST00000467290.1	731	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGATAGTGGGATGCTT	4	True	NA	NA	False	NA	NA	NA	104156988	104130603	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_104131224_104156877
H1_mix_00090384	chrX	-	3894	18	NNC	ENSG00000133131.15	novel	2940	17	NA	NA	-19	59	at_least_one_novel_splicesite	TRUE	non_canonical	1	2	junction_4	6.5100401563562	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTCTAATTTATATTA	9	True	NA	57	True	AATATA	-10	NA	107000231	106940678	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_106941633_106941975_106942222_106942514_106943206_106954912_106955089_106955954_106956011_106956479_106956535_106956935_106957005_106958335_106958465_106962011_106962111_106976583_106976685_106978079_106978200_106980890_106981020_106981344_106981478_106985095_106985243_106985981_106986201_106993229_106993363_106999676_106999750_106999867
H1_mix_00090385	chrX	-	1554	2	FSM	ENSG00000133131.15	ENST00000478924.1	828	2	0	-726	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTAGGCTTGGATTTGA	NA	False	NA	-2	True	AATAAA	-16	NA	106942584	106940737	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_106942222_106942514
H1_mix_00090387	chrX	-	1775	7	FSM	ENSG00000198088.10	ENST00000484614.5	1515	7	17	-277	17	232	multi-exon	FALSE	canonical	3	10	junction_4	7.03957069398096	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGTGAAAATAATCCAGAA	-2	True	NA	NA	False	NA	NA	NA	107206416	107123194	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_107124333_107147742_107147810_107153171_107153307_107153453_107153504_107167648_107167785_107175088_107175194_107206272
H1_mix_00090388	chrX	-	1633	8	NIC	ENSG00000198088.10	novel	1755	9	NA	NA	28	-5	combination_of_known_junctions	FALSE	canonical	3	11	junction_4	6.40153042925945	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACATGTAATACTGAAA	73	False	NA	-54	True	AATAAA	-16	NA	107206405	107123476	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_107124333_107147742_107147810_107153171_107153307_107153453_107153504_107154095_107154247_107167648_107167785_107175088_107175194_107206272
H1_mix_00090390	chrX	-	618	6	FSM	ENSG00000198088.10	ENST00000421752.1	618	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	7.49933330370107	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTTATCCTGTCACAGC	2	True	NA	NA	False	NA	NA	NA	107206433	107153291	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_107153307_107153453_107153504_107154095_107154247_107167648_107167785_107175088_107175194_107206272
H1_mix_00090392	chrX	-	2329	3	FSM	ENSG00000157514.18	ENST00000372390.8	1812	3	-517	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	36	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGTCTGACTGAGTAT	0	True	NA	NA	False	AATAAA	-27	NA	107717062	107713220	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_107714750_107715898_107715951_107716314
H1_mix_00090393	chrX	-	1954	3	FSM	ENSG00000157514.18	ENST00000372397.6	2027	3	73	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	13	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGTCTGACTGAGTAT	0	True	NA	NA	False	AATAAA	-27	NA	107717062	107713220	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_107714750_107715898_107715951_107716689
H1_mix_00090395	chrX	-	1478	5	FSM	ENSG00000101843.19	ENST00000217958.8	1470	5	0	-8	0	8	multi-exon	FALSE	canonical	3	566	junction_2	35.7936796096741	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTCTTTCAAATTAGCTA	-3	True	NA	2	True	AATAAA	-21	NA	108091542	108084198	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_108085128_108087685_108087853_108087952_108088100_108088751_108088851_108091406
H1_mix_00090396	chrX	-	768	5	FSM	ENSG00000101843.19	ENST00000361815.9	768	5	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	234.772762474696	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGAGTTACTTGTTCGAA	-3	True	NA	NA	False	TATAAA	-19	NA	108091542	108084829	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_108085128_108087764_108087853_108087952_108088100_108088751_108088851_108091406
H1_mix_00090397	chrX	-	6692	45	FSM	ENSG00000197565.17	ENST00000334504.12	6685	45	0	-7	0	0	multi-exon	TRUE	canonical	3	114	junction_38	33.0606364400049	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTGATGTTCCTTTAT	10	True	NA	-21	True	AATAAA	-24	NA	108438422	108155606	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_108157261_108159461_108159749_108160462_108160655_108161618_108161736_108162891_108163039_108164599_108164699_108164876_108165039_108165369_108165487_108169494_108169621_108169944_108170017_108170608_108170717_108170809_108170918_108171386_108171462_108172468_108172533_108174439_108174622_108175089_108175216_108175653_108175798_108176840_108177012_108178683_108178846_108179216_108179439_108180514_108180623_108180896_108180969_108187095_108187280_108187847_108188028_108188516_108188678_108190391_108190497_108191392_108191534_108192472_108192581_108193627_108193698_108194533_108194588_108195081_108195127_108196510_108196580_108202927_108202982_108204319_108204413_108205438_108205481_108205659_108205696_108206517_108206581_108209968_108210005_108211671_108211741_108214111_108214229_108219697_108219743_108221239_108221375_108310747_108310829_108437941_108437994_108438185
H1_mix_00090399	chrX	-	6751	46	FSM	ENSG00000197565.17	ENST00000394872.6	6750	46	0	-1	0	0	multi-exon	FALSE	canonical	0	0	junction_23	47.0712409905992	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTGATGTTCCTTTAT	2	True	NA	-21	True	AATAAA	-24	NA	108438430	108155606	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_108157261_108159461_108159749_108160462_108160655_108161618_108161736_108162891_108163039_108164599_108164699_108164876_108165039_108165369_108165487_108169494_108169621_108169944_108170017_108170608_108170717_108170809_108170918_108171386_108171462_108172468_108172533_108174439_108174622_108175089_108175216_108175653_108175798_108176840_108177012_108178683_108178846_108179216_108179439_108180514_108180623_108180896_108180969_108183721_108183773_108187095_108187280_108187847_108188028_108188516_108188678_108190391_108190497_108191392_108191534_108192472_108192581_108193627_108193698_108194533_108194588_108195081_108195127_108196510_108196580_108202927_108202982_108204319_108204413_108205438_108205481_108205659_108205696_108206517_108206581_108209968_108210005_108211671_108211741_108214111_108214229_108219697_108219743_108221239_108221375_108310747_108310829_108437941_108437994_108438185
H1_mix_00090400	chrX	-	6628	44	FSM	ENSG00000197565.17	ENST00000621266.4	6627	44	0	-1	0	0	multi-exon	FALSE	canonical	3	21	junction_9	38.4897140214317	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTGATGTTCCTTTAT	2	True	NA	-21	True	AATAAA	-24	NA	108438430	108155606	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_108157261_108159461_108159749_108160462_108160655_108161618_108161736_108162891_108163039_108164599_108164699_108164876_108165039_108165369_108165487_108169494_108169621_108170608_108170717_108170809_108170918_108171386_108171462_108172468_108172533_108174439_108174622_108175089_108175216_108175653_108175798_108176840_108177012_108178683_108178846_108179216_108179439_108180514_108180623_108180896_108180969_108187095_108187280_108187847_108188028_108188516_108188678_108190391_108190497_108191392_108191534_108192472_108192581_108193627_108193698_108194533_108194588_108195081_108195127_108196510_108196580_108202927_108202982_108204319_108204413_108205438_108205481_108205659_108205696_108206517_108206581_108209968_108210005_108211671_108211741_108214111_108214229_108219697_108219743_108221239_108221375_108310747_108310829_108437941_108437994_108438185
H1_mix_00090403	chrX	-	2018	4	FSM	ENSG00000197565.17	ENST00000461897.5	1889	4	-35	-94	-35	94	multi-exon	FALSE	canonical	3	13	junction_1	86.4908472999696	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTCTACTGTATAGTCAA	1018	False	NA	75	True	NA	NA	NA	108438465	108267547	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_108269153_108310747_108310829_108437941_108437994_108438185
H1_mix_00090404	chrX	-	6563	2	FSM	ENSG00000133124.12	ENST00000372129.4	6563	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTGTAGAGATTCATTTT	-1	True	NA	-1	True	AATAAA	-18	NA	108736563	108719945	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_108722524_108732578
H1_mix_00090405	chrX	-	1010	2	NNC	ENSG00000068366.21	novel	464	3	NA	NA	9531	544	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCAAGACTCTTCTCTCAGA	14	False	NA	0	True	AATAAA	-18	NA	109625155	109623699	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_109624322_109624767
H1_mix_00090406	chrX	-	1506	1	FSM	ENSG00000176076.7	ENST00000372101.3	1473	1	-33	0	-33	0	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCAAGACTCTTCTCTCAGA	NA	False	NA	0	True	AATAAA	-18	NA	109625205	109623699	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_109623700_109625200
H1_mix_00090407	chrX	-	4896	16	FSM	ENSG00000068366.21	ENST00000672401.1	4891	16	0	-5	0	5	multi-exon	FALSE	canonical	3	103	junction_14	28.8286894140773	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTACTTCATTATGCATT	-11	True	NA	-10	True	AATAAA	-23	NA	109733257	109641329	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_109644187_109659353_109659512_109661530_109661646_109663210_109663403_109665419_109665495_109668100_109668274_109669033_109669174_109674401_109674474_109677987_109678112_109678264_109678416_109680997_109681137_109681265_109681376_109682718_109682897_109683135_109683376_109696143_109696197_109733138
H1_mix_00090408	chrX	-	5150	15	FSM	ENSG00000068366.21	ENST00000502391.6	4971	15	50	-229	0	3	multi-exon	FALSE	canonical	3	25	junction_14	46.8419509344662	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGTACTTCATTATGCA	603	False	NA	-12	True	AATAAA	-21	NA	109733275	109641331	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_109644187_109659353_109659512_109661530_109661646_109663210_109663403_109665419_109665495_109668100_109668274_109669033_109669174_109674401_109674474_109677987_109678112_109678264_109678416_109680997_109681137_109681265_109681376_109682718_109682897_109683135_109683667_109733138
H1_mix_00090409	chrX	-	5039	16	FSM	ENSG00000068366.21	ENST00000348502.10	5032	16	0	-7	0	5	multi-exon	FALSE	canonical	3	23	junction_14	46.4698707647104	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTACTTCATTATGCATT	475	False	NA	-10	True	AATAAA	-23	NA	109733403	109641329	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_109644187_109659353_109659512_109661530_109661646_109663210_109663403_109665419_109665495_109668100_109668274_109669033_109669174_109674401_109674474_109677987_109678112_109678264_109678416_109680997_109681137_109681265_109681376_109682718_109682897_109683135_109683373_109696143_109696197_109733138
H1_mix_00090410	chrX	-	4602	15	FSM	ENSG00000068366.21	ENST00000672282.1	4602	15	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_14	47.3368842684528	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTGGATTTGGAGAGAA	26	True	NA	-115	True	GATAAA	-11	NA	109733220	109641533	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_109644187_109659353_109659512_109661530_109661646_109663210_109663403_109665419_109665495_109668100_109668274_109669033_109669174_109674401_109674474_109677987_109678112_109678264_109678416_109680997_109681137_109681265_109681376_109682718_109682897_109683135_109683376_109733138
H1_mix_00090411	chrX	-	5351	6	FSM	ENSG00000101935.12	ENST00000262844.10	5350	6	0	-1	0	1	multi-exon	FALSE	canonical	3	116	junction_3	17.3020230031057	235	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCATTTTATGTTTCTTT	25	True	NA	-6	True	AATAAA	-15	NA	110318085	110194184	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_110198635_110200953_110201051_110202445_110202537_110216517_110216633_110264488_110264600_110317598
H1_mix_00090412	chrX	-	519	1	ISM	ENSG00000133136.5	ENST00000372054.3	1276	3	93399	352	93399	-352	mono-exon	FALSE	NA	NA	NA	NA	NA	192	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATATTTAGCAATATCATA	-13	True	NA	NA	False	AATAAA	-25	NA	110346973	110346454	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_110346500_110347000
H1_mix_00090413	chrX	-	4238	12	FSM	ENSG00000101938.15	ENST00000372042.6	3860	12	-378	0	-376	0	multi-exon	FALSE	canonical	3	9	junction_8	8.0903983495589	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTAGTCTTGTTGCATAA	NA	False	NA	1	True	AATAAA	-22	NA	110796195	110673855	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_110676362_110679335_110679426_110681481_110681650_110688593_110688804_110694162_110694332_110700653_110700722_110719834_110719929_110721384_110721531_110759660_110759755_110762694_110762808_110792087_110792216_110795743
H1_mix_00090414	chrX	-	1658	12	FSM	ENSG00000101938.15	ENST00000444321.2	1658	12	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_8	8.89609441652732	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACATCTCCTCCAAAGAG	14	True	NA	NA	False	NA	NA	NA	110795819	110676056	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_110676362_110679335_110679426_110681481_110681650_110688593_110688804_110694162_110694332_110700653_110700722_110719834_110719929_110721384_110721528_110759660_110759755_110762694_110762808_110792087_110792216_110795743
H1_mix_00090415	chrX	-	3536	13	FSM	ENSG00000077274.9	ENST00000324068.2	3532	13	0	-4	0	4	multi-exon	FALSE	canonical	3	31	junction_2	8.44590630621328	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGACTTGAATTGATGGC	11	True	NA	5	True	AATAAA	-25	NA	111270483	111245094	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_111246760_111247367_111247505_111247870_111247993_111248568_111248772_111248934_111249058_111250916_111251104_111251208_111251287_111251548_111251743_111252306_111252500_111253007_111253217_111254271_111254404_111263771_111263952_111270370
H1_mix_00090416	chrX	-	8933	5	FSM	ENSG00000077279.20	ENST00000680476.1	8933	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.4790199457749	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGCTGACATTCTTTT	1772	False	NA	0	True	AATAAA	-15	NA	111410420	111293778	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_111301744_111330903_111331042_111333050_111333154_111400989_111401331_111410034
H1_mix_00090418	chrX	-	2054	1	FSM	ENSG00000225031.1	ENST00000432307.1	1813	1	-21	-220	-21	220	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTACAGCTTTTTAGAGGA	3	True	NA	NA	False	AATATA	-15	NA	111621510	111619456	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_111619500_111621500
H1_mix_00090419	chrX	-	6576	12	FSM	ENSG00000126016.17	ENST00000304758.5	6888	12	0	312	0	62	multi-exon	FALSE	canonical	2	4	junction_10	5.95437196138648	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACTTTCAATTCAGTATG	72	False	NA	61	True	NA	NA	NA	112840815	112774814	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_112778665_112778996_112779681_112780885_112781119_112782539_112782663_112790591_112790783_112791831_112791982_112804946_112805093_112809893_112809987_112811248_112811394_112815357_112815878_112832293_112832371_112840451
H1_mix_00090420	chrX	-	7661	14	FSM	ENSG00000126016.17	ENST00000371959.9	7613	14	-48	0	-48	0	multi-exon	FALSE	canonical	2	8	junction_4	4.93987518707764	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCGTGTGGAAAATGCTT	8	True	NA	-1	True	AATAAA	-21	NA	112840879	112774876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_112778665_112778996_112779681_112780885_112781119_112782539_112782663_112790591_112790783_112791831_112791982_112804946_112805093_112809893_112809987_112811248_112811394_112815357_112815878_112822254_112823189_112825071_112825221_112832293_112832371_112840451
H1_mix_00090421	chrX	-	394	3	NIC	ENSG00000241743.4	novel	764	5	NA	NA	41	23517	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	2	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGTAGTTGGATGTTTT	5	True	NA	NA	False	ATTAAA	-28	NA	113991935	113938193	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_113938321_113963552_113963600_113991715
H1_mix_00090422	chrX	-	500	4	Intergenic	novelGene_1707	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	10.9848380355227	5066	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGCAGTTTACCTTCAAC	NA	False	NA	NA	False	GATAAA	-33	NA	114465827	114400078	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_114400209_114461790_114461851_114462914_114463180_114465782
H1_mix_00090423	chrX	-	1397	2	FSM	ENSG00000289287.1	ENST00000691947.1	1444	2	47	0	47	0	multi-exon	FALSE	canonical	2	4	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTACACCCATCTCTC	45	False	NA	3	True	ATTAAA	-18	NA	114606849	114594405	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_114595599_114606645
H1_mix_00090425	chrX	-	825	1	NIC	ENSG00000289287.1	novel	1603	3	NA	NA	2245	-8619	mono-exon	FALSE	NA	NA	NA	NA	NA	423	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAATACCTGCCTCTACAA	2243	False	NA	NA	False	NA	NA	NA	114604651	114603826	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_114603800_114604700
H1_mix_00090426	chrX	-	4959	21	FSM	ENSG00000130224.15	ENST00000317135.13	4953	21	0	-6	0	6	multi-exon	TRUE	canonical	3	13	junction_17	6.60378679243962	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTATTTCTTTTCTCCC	-2	True	NA	NA	False	GATAAA	-21	NA	115234096	115110609	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_115113336_115122526_115122605_115122759_115122898_115123079_115123193_115123944_115124003_115126842_115126894_115130154_115130200_115149826_115149944_115150021_115150071_115156601_115156668_115163675_115163784_115165404_115165464_115165557_115165656_115165840_115165953_115166254_115166343_115170298_115170433_115179426_115179564_115179645_115179752_115184410_115184538_115188225_115188371_115233692
H1_mix_00090429	chrX	-	2105	2	Intergenic	novelGene_1716	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	91	junction_1	0	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATATAGCATGGTTTCT	NA	False	NA	93	True	ATTAAA	-2	NA	116818014	116809631	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_116811350_116817627
H1_mix_00090431	chrX	-	1628	1	FSM	ENSG00000279587.1	ENST00000624003.1	1052	1	-588	12	-588	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAATTTGAATTTCATAT	NA	False	NA	NA	False	AATAAA	-17	NA	117896271	117894643	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_117894600_117896300
H1_mix_00090432	chrX	-	3270	7	FSM	ENSG00000003096.14	ENST00000371882.5	3256	7	0	-14	0	14	multi-exon	FALSE	canonical	3	68	junction_6	7.16472842006823	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCATTATTGTCTGATTT	5	True	NA	-5	True	AATAAA	-29	NA	118116798	117897798	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_117899396_117901832_117901947_117909300_117910097_117919520_117919718_117920237_117920371_117945433_117945576_118116507
H1_mix_00090433	chrX	-	3409	8	FSM	ENSG00000003096.14	ENST00000540167.5	3396	8	0	-13	0	12	multi-exon	FALSE	canonical	2	7	junction_7	34.8483595491281	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCCCATTATTGTCTGAT	NA	False	NA	-7	True	AATAAA	-27	NA	118116865	117897800	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_117899396_117901832_117901947_117909300_117910097_117919520_117919718_117920237_117920371_117945433_117945576_118028423_118028498_118116507
H1_mix_00090434	chrX	-	3223	1	FSM	ENSG00000224281.5	ENST00000395539.2	3062	1	-168	7	-135	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGACATTTTTGTACTAT	530	False	NA	-7	True	AATAAA	-6	NA	119469263	119466040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_119466000_119469300
H1_mix_00090435	chrX	-	2300	7	FSM	ENSG00000018610.15	ENST00000644802.2	2301	7	1	0	0	0	multi-exon	FALSE	canonical	3	57	junction_6	5.20949986936259	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGTTAACCTTCTTGTA	-19	True	NA	-10	True	ATTAAA	-17	NA	119565408	119538148	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_119539790_119541327_119541421_119542504_119542595_119544352_119544492_119545462_119545505_119560267_119560386_119565231
H1_mix_00090437	chrX	-	5616	2	FSM	ENSG00000186416.18	ENST00000649446.1	3741	2	-1820	-55	-1820	55	multi-exon	FALSE	canonical	3	65	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGAAGTGGTGTTTGCAC	NA	False	NA	54	True	NA	NA	NA	119594970	119588281	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_119591310_119592382
H1_mix_00090438	chrX	-	3817	3	FSM	ENSG00000186416.18	ENST00000304449.8	3817	3	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	4	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGCGTGCTCATTTCCG	17	False	NA	-1	True	AATAAA	-23	NA	119606443	119588336	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_119591310_119592382_119592514_119605730
H1_mix_00090439	chrX	-	4731	10	FSM	ENSG00000125354.24	ENST00000343984.5	2693	10	-123	-1915	-123	0	multi-exon	FALSE	canonical	3	23	junction_1	48.6828993729628	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTGTGATCTGATCTT	NA	False	NA	NA	False	AATAAA	-19	NA	119693493	119615723	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_119618787_119629317_119629509_119633359_119633493_119637026_119637196_119640691_119640789_119649936_119650099_119652853_119653041_119663481_119663678_119675553_119675669_119693075
H1_mix_00090441	chrX	-	4495	11	FSM	ENSG00000125354.24	ENST00000394610.7	4495	11	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	28.5979020209525	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTGTGGTGTTCTTAA	-5	True	NA	-4	True	ATTAAA	-16	NA	119693168	119616944	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_119620052_119625334_119625380_119629317_119629509_119633359_119633493_119637026_119637196_119640691_119640789_119649936_119650099_119652853_119653041_119663481_119663678_119675553_119675669_119693075
H1_mix_00090442	chrX	-	4652	10	FSM	ENSG00000125354.24	ENST00000354416.7	4652	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	49.2832578689035	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTGTGGTGTTCTTAA	25	False	NA	-4	True	ATTAAA	-16	NA	119693370	119616944	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_119620052_119629317_119629509_119633359_119633493_119637026_119637196_119640691_119640789_119649936_119650099_119652853_119653041_119663481_119663678_119675553_119675669_119693075
H1_mix_00090443	chrX	-	415	4	NNC	ENSG00000198918.8	novel	390	3	NA	NA	0	25709	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5162.88048369211	2085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCGGGCGTGGTGGCGGG	-1	True	NA	NA	False	ACTAAA	-32	NA	119791630	119760794	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_119760820_119786503_119786733_119789907_119790012_119791573
H1_mix_00090444	chrX	-	390	3	FSM	ENSG00000198918.8	ENST00000361575.4	390	3	0	0	0	0	multi-exon	FALSE	canonical	3	10123	junction_2	751.5	2029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGTTGTATTGTGGTTT	-1	True	NA	-10	True	AATAAA	-23	NA	119791630	119786503	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_119786733_119789907_119790012_119791573
H1_mix_00090445	chrX	-	1915	2	FSM	ENSG00000198918.8	ENST00000468844.1	1915	2	0	0	0	0	multi-exon	FALSE	canonical	3	11626	junction_1	0	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCTGTTGTATTGTGGT	2	True	NA	-12	True	AATAAA	-21	NA	119791595	119786505	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_119786733_119789907
H1_mix_00090446	chrX	-	3292	10	FSM	ENSG00000125351.13	ENST00000345865.6	2335	10	35	-992	0	988	multi-exon	FALSE	canonical	3	216	junction_3	34.4978081250403	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGGGGGTAGCTAGTTCC	23	True	NA	NA	False	NA	NA	NA	119852963	119833033	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_119835028_119837756_119838052_119838366_119838528_119841075_119841259_119841734_119841779_119843190_119843302_119845197_119845297_119851494_119851602_119851766_119851874_119852772
H1_mix_00090447	chrX	-	2894	11	FSM	ENSG00000125351.13	ENST00000276201.7	2343	11	-67	-484	-32	484	multi-exon	FALSE	canonical	3	36	junction_3	96.1846661375918	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACCCCATCTCTAAAATA	NA	False	NA	NA	False	NA	NA	NA	119853030	119833537	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_119835028_119837756_119838052_119838366_119838528_119840645_119840685_119841075_119841259_119841734_119841779_119843190_119843302_119845197_119845297_119851494_119851602_119851766_119851874_119852772
H1_mix_00090448	chrX	-	748	6	FSM	ENSG00000125351.13	ENST00000478840.1	748	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	106.337951832824	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGGGGGATGAGGAGGAA	7732	False	NA	NA	False	NA	NA	NA	119845254	119838265	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_119838528_119840593_119840685_119841075_119841259_119841734_119841779_119843190_119843302_119845197
H1_mix_00090449	chrX	-	1386	1	FSM	ENSG00000125352.6	ENST00000371442.4	1259	1	-184	57	-184	-57	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTACTTCGTGTCCTTCC	NA	False	NA	-6	True	AATAAA	-19	NA	119871917	119870531	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_119870500_119871900
H1_mix_00090450	chrX	-	5947	9	FSM	ENSG00000101882.10	ENST00000371410.5	5942	9	0	-5	0	5	multi-exon	TRUE	canonical	3	138	junction_6	20.650363192932	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTGTATTTTTAATGTA	12	True	NA	0	True	AATAAA	-21	NA	119943751	119920666	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_119925395_119930015_119930166_119931935_119932012_119932106_119932217_119934493_119934558_119936296_119936432_119936611_119936683_119938729_119938811_119943219
H1_mix_00090451	chrX	-	1413	9	FSM	ENSG00000101882.10	ENST00000652253.1	1394	9	0	-19	0	0	multi-exon	FALSE	canonical	1	1	junction_6	57.0831356444265	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGTTCTTTGGGTTATT	6	True	NA	-3	True	AATAAA	-24	NA	119943604	119925050	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_119925395_119930015_119930166_119931935_119932012_119932106_119932217_119934493_119934558_119936296_119936429_119936611_119936683_119938729_119938811_119943219
H1_mix_00090452	chrX	-	2384	3	FSM	ENSG00000233382.8	ENST00000452254.3	2424	3	40	0	10	0	multi-exon	FALSE	canonical	3	13	junction_1	0.5	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATGGTGCACTGACTT	-14	True	NA	NA	False	AATAAA	-14	NA	120245233	120236457	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_120238243_120240226_120240356_120244763
H1_mix_00090453	chrX	-	6538	9	FSM	ENSG00000005893.16	ENST00000200639.9	6535	9	0	-3	0	3	multi-exon	FALSE	canonical	3	266	junction_1	88.5744743139918	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATAACCTCATTTTTATT	-3	True	NA	1	True	AATAAA	-23	NA	120469296	120426144	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_120431463_120441729_120441895_120442598_120442663_120446304_120446428_120447840_120448026_120448969_120449129_120455356_120455571_120456650_120456770_120469105
H1_mix_00090454	chrX	-	4030	9	FSM	ENSG00000005893.16	ENST00000371335.4	4030	9	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_1	75.3027223943464	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTACCTTTTTTCCCG	12	False	NA	-3	True	AATAAA	-24	NA	120469306	120436493	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_120439294_120441729_120441895_120442598_120442663_120446304_120446428_120447840_120448026_120448969_120449129_120455356_120455571_120456650_120456770_120469105
H1_mix_00090455	chrX	-	5915	20	FSM	ENSG00000158290.19	ENST00000371322.11	5915	20	0	0	0	0	multi-exon	FALSE	non_canonical	3	146	junction_19	20.1682672227954	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATAATTATGCTTTGT	-3	True	NA	4	True	ATTAAA	-26	NA	120560962	120523857	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_120526857_120530101_120530255_120532421_120532595_120534480_120534587_120535829_120535944_120536926_120537035_120538123_120538210_120538659_120538771_120539267_120539373_120540369_120540563_120541601_120541721_120542965_120543034_120543726_120543810_120544113_120544204_120544480_120544644_120545443_120545518_120546546_120546617_120547135_120547240_120557923_120558040_120560082
H1_mix_00090456	chrX	-	4418	20	FSM	ENSG00000158290.19	ENST00000371323.3	4418	20	0	0	0	0	multi-exon	FALSE	non_canonical	3	24	junction_19	40.0387623819068	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTAGAGAAGATCTTTA	-1	True	NA	-10	True	AATAAA	-18	NA	120559915	120524611	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_120526857_120530101_120530255_120532421_120532595_120534480_120534587_120535829_120535944_120536926_120537035_120538123_120538210_120538659_120538771_120539267_120539373_120540369_120540563_120541601_120541721_120542965_120543034_120543726_120543810_120544113_120544204_120544480_120544644_120545443_120545518_120546546_120546617_120547135_120547240_120557923_120558040_120559778
H1_mix_00090457	chrX	-	4906	21	FSM	ENSG00000158290.19	ENST00000336592.11	4906	21	0	0	0	0	multi-exon	FALSE	non_canonical	3	47	junction_20	35.2707740204266	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTAGAGAAGATCTTTA	7	True	NA	-10	True	AATAAA	-18	NA	120561453	120524611	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_120526857_120530101_120530255_120532421_120532595_120534480_120534587_120535829_120535944_120536926_120537035_120538123_120538210_120538659_120538771_120539267_120539373_120540369_120540563_120541601_120541721_120542965_120543034_120543726_120543810_120544113_120544204_120544480_120544644_120545443_120545518_120546546_120546617_120547135_120547240_120557923_120558040_120560082_120560626_120561371
H1_mix_00090458	chrX	-	5448	20	FSM	ENSG00000158290.19	ENST00000680577.1	5440	20	0	-8	0	0	multi-exon	FALSE	non_canonical	3	47	junction_19	35.3768786880128	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTAGAGAAGATCTTTA	81	False	NA	-10	True	AATAAA	-18	NA	120561545	120524611	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_120526857_120530101_120530255_120532421_120532595_120534480_120534587_120535829_120535944_120536926_120537035_120538123_120538771_120539267_120539373_120540369_120540563_120541601_120541721_120542965_120543034_120543726_120543810_120544113_120544204_120544480_120544644_120545443_120545518_120546546_120546617_120547135_120547240_120557923_120558040_120560082_120560626_120561371
H1_mix_00090460	chrX	-	1647	2	FSM	ENSG00000171155.8	ENST00000304661.6	1636	2	0	-11	0	11	multi-exon	FALSE	canonical	3	169	junction_1	0	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACTGAAAATTACTTAC	-7	True	NA	-8	True	ATTAAA	-29	NA	120630054	120625662	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_120627172_120629916
H1_mix_00090462	chrX	-	5603	39	NIC	ENSG00000125676.20	novel	5600	39	NA	NA	-1	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_2	78.322160359148	3117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATTGTGTATATTGTTG	-11	True	NA	-1	True	AATAAA	-25	NA	123733053	123600560	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_123601339_123610917_123610958_123611439_123611517_123613398_123613557_123613638_123613709_123614051_123614190_123619400_123619437_123620906_123620966_123621156_123621588_123622757_123622861_123623104_123623284_123623786_123623972_123624059_123624192_123624540_123624670_123625911_123626070_123626520_123626663_123627692_123627969_123631687_123631853_123632860_123633041_123633952_123634071_123636078_123636176_123638042_123638124_123638933_123639028_123640537_123640623_123644574_123644677_123644778_123644910_123645333_123645376_123665641_123665838_123667105_123667279_123668158_123668315_123671668_123671762_123686547_123686715_123696020_123696155_123696720_123696843_123697680_123697752_123703453_123703506_123706857_123706950_123712849_123712909_123732951
H1_mix_00090463	chrX	-	5593	39	NNC	ENSG00000125676.20	novel	5600	39	NA	NA	-2	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	78.322160359148	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATATTATTGTGTATATT	3	True	NA	-5	True	AATAAA	-21	NA	123733039	123600564	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_123601339_123610917_123610965_123611438_123611517_123613398_123613557_123613638_123613709_123614051_123614190_123619400_123619437_123620906_123620966_123621156_123621588_123622757_123622861_123623104_123623284_123623786_123623972_123624059_123624192_123624540_123624670_123625911_123626070_123626520_123626663_123627692_123627969_123631687_123631853_123632860_123633041_123633952_123634071_123636078_123636176_123638042_123638124_123638933_123639028_123640537_123640623_123644574_123644677_123644778_123644910_123645333_123645376_123665641_123665838_123667105_123667279_123668158_123668315_123671668_123671762_123686547_123686715_123696020_123696155_123696720_123696843_123697680_123697752_123703453_123703506_123706857_123706950_123712849_123712909_123732951
H1_mix_00090464	chrX	-	7137	39	NNC	ENSG00000125676.20	novel	5600	39	NA	NA	-1629	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	98.3742254208226	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATATTATTGTGTATATT	NA	False	NA	-5	True	AATAAA	-21	NA	123734685	123600564	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_123601339_123610917_123610965_123611438_123611517_123613398_123613557_123613638_123613709_123614051_123614190_123619400_123619437_123620906_123620966_123621156_123621588_123622757_123622861_123623104_123623284_123623643_123623710_123623786_123623972_123624059_123624192_123624540_123624670_123625911_123626070_123626520_123626663_123627692_123627969_123631687_123631853_123633952_123634071_123636078_123636176_123638042_123638124_123638933_123639028_123640525_123640623_123644574_123644677_123644778_123644910_123645333_123645376_123665641_123665838_123667105_123667279_123668158_123668315_123671668_123671762_123686547_123686715_123696020_123696155_123696720_123696843_123697680_123697752_123703453_123703506_123706857_123706950_123712849_123712909_123732951
H1_mix_00090465	chrX	-	7988	39	NIC	ENSG00000125676.20	novel	5600	39	NA	NA	3	2	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_2	86.1288894365176	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTATATTATTGTGTATA	8	True	NA	-7	True	AATAAA	-19	NA	123733034	123600566	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_123603749_123610917_123610958_123611439_123611517_123613398_123613557_123613638_123613709_123614051_123614190_123619400_123619437_123620906_123620966_123621156_123621588_123622757_123622861_123623104_123623284_123623786_123623972_123624059_123624192_123624540_123624670_123625911_123626070_123626520_123626663_123627692_123627969_123631687_123631853_123632860_123633041_123633952_123634071_123636078_123636176_123638042_123638124_123638933_123639028_123640537_123640623_123644574_123644677_123644778_123644910_123645333_123645376_123665641_123665838_123667105_123667279_123668158_123668315_123671668_123671762_123686547_123686715_123696020_123696155_123696720_123696843_123697680_123697752_123703453_123703506_123706857_123706950_123712849_123712909_123732951
H1_mix_00090466	chrX	-	5680	39	NIC	ENSG00000125676.20	novel	5600	39	NA	NA	3	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_2	86.5882133899351	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATTGTGTATATTGTTG	-7	True	NA	-1	True	AATAAA	-25	NA	123733049	123600560	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_123601339_123610917_123610958_123611439_123611517_123613398_123613557_123613638_123613709_123614051_123614190_123619400_123619518_123620906_123620966_123621156_123621588_123622757_123622861_123623104_123623284_123623786_123623972_123624059_123624192_123624540_123624670_123625911_123626070_123626520_123626663_123627692_123627969_123631687_123631853_123632860_123633041_123633952_123634071_123636078_123636176_123638042_123638124_123638933_123639028_123640537_123640623_123644574_123644677_123644778_123644910_123645333_123645376_123665641_123665838_123667105_123667279_123668158_123668315_123671668_123671762_123686547_123686715_123696020_123696155_123696720_123696843_123697680_123697752_123703453_123703506_123706857_123706950_123712849_123712909_123732951
H1_mix_00090474	chrX	-	358	1	FSM	ENSG00000232599.1	ENST00000422498.1	534	1	151	25	151	-25	mono-exon	FALSE	NA	NA	NA	NA	NA	7813	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGCCGAAACTTGCGCTTG	9026	False	NA	NA	False	NA	NA	NA	125204187	125203829	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_125203800_125204200
H1_mix_00090475	chrX	-	9197	4	Intergenic	novelGene_1729	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	26.2339898266013	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGCCTCAGGTATTTTTT	NA	False	NA	0	True	ATTAAA	-21	NA	125394205	125382043	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_125385413_125385674_125385912_125386838_125392186_125393961
H1_mix_00090476	chrX	-	9062	4	Intergenic	novelGene_1730	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	30	junction_1	14.6590889515307	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGCCTCAGGTATTTTTT	NA	False	NA	0	True	ATTAAA	-21	NA	125394205	125382043	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_125385413_125385809_125385912_125386838_125392186_125393961
H1_mix_00090477	chrX	-	1843	5	Intergenic	novelGene_1731	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_3	19.3584606826059	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGTGTAATACTGAATTC	NA	False	NA	-15	True	ATTAAA	-16	NA	125394169	125384916	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_125385413_125385809_125385912_125386838_125387024_125392049_125392902_125393961
H1_mix_00090478	chrX	-	829	3	Intergenic	novelGene_1732	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	33	junction_2	34	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGTGTAATACTGAATTC	NA	False	NA	-15	True	ATTAAA	-16	NA	125394197	125384916	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_125385413_125385814_125385912_125393961
H1_mix_00090479	chrX	-	4625	2	Intergenic	novelGene_1733	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	31	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGTGTAATACTGAATTC	NA	False	NA	-15	True	ATTAAA	-16	NA	125394202	125384916	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_125389301_125393961
H1_mix_00090480	chrX	-	936	4	Intergenic	novelGene_1735	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	30	junction_1	13.8884444373331	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATGTGAAACATTGTGTAA	NA	False	NA	-25	True	ATTAAA	-6	NA	125394124	125384926	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_125385413_125385809_125385912_125386838_125387024_125393961
H1_mix_00090481	chrX	-	3367	2	FSM	ENSG00000198889.5	ENST00000371126.3	3345	2	-22	0	-22	0	multi-exon	FALSE	canonical	3	19	junction_1	0	804	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGAATCCTGTTGTGTTT	-12	True	NA	NA	False	AATAAA	-26	NA	126552836	126549382	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_126551108_126551194
H1_mix_00090482	chrX	-	3994	25	FSM	ENSG00000102038.16	ENST00000371121.5	3989	25	0	-5	0	0	multi-exon	FALSE	canonical	3	409	junction_13	76.0264482488386	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTCCTGTTTTTTTGTG	-1	True	NA	NA	False	AATAAA	-23	NA	129523490	129446500	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_129447234_129448332_129448444_129465519_129465733_129465843_129465963_129468772_129468906_129471203_129471327_129480700_129480815_129481074_129481186_129487017_129487138_129488936_129489086_129490059_129490193_129491940_129492094_129493039_129493076_129496749_129496872_129497844_129498072_129499731_129499842_129504733_129504803_129506079_129506212_129507940_129508097_129511803_129511984_129515686_129515788_129515893_129515995_129516330_129516498_129518360_129518448_129523196
H1_mix_00090484	chrX	-	3958	24	FSM	ENSG00000102038.16	ENST00000371123.5	3948	24	0	-10	0	5	multi-exon	FALSE	canonical	3	94	junction_12	117.696447211462	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTTTTTTGTGCAGTA	4	True	NA	NA	False	AATAAA	-28	NA	129523485	129446495	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_129447234_129448332_129448444_129465519_129465733_129465843_129465963_129468772_129468906_129471203_129471327_129480700_129480815_129481074_129481186_129487017_129487138_129488936_129489086_129490059_129490193_129491940_129492094_129496749_129496872_129497844_129498072_129499731_129499842_129504733_129504803_129506079_129506212_129507940_129508097_129511803_129511984_129515686_129515788_129515893_129515995_129516330_129516498_129518360_129518448_129523196
H1_mix_00090485	chrX	-	4135	25	NIC	ENSG00000102038.16	novel	4099	25	NA	NA	0	63	combination_of_known_splicesites	FALSE	canonical	3	92	junction_1	120.478206593097	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTATTTGGTTCAAAGTT	NA	False	NA	NA	False	NA	NA	NA	129523500	129446437	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_129447302_129448332_129448444_129465519_129465733_129465843_129465963_129468772_129468906_129471203_129471327_129480700_129480815_129481074_129481186_129487017_129487138_129488936_129489086_129490059_129490193_129491940_129492094_129493039_129493076_129496749_129496872_129497844_129498072_129499731_129499842_129504733_129504803_129506079_129506212_129507940_129508097_129511803_129511984_129515686_129515788_129515893_129515995_129516330_129516498_129518360_129518448_129523196
H1_mix_00090486	chrX	-	3135	3	FSM	ENSG00000171388.12	ENST00000429967.3	3224	3	0	89	0	-89	multi-exon	FALSE	canonical	2	7	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTTTGTATCATTTTAT	-1	True	NA	NA	False	AATAAA	-16	NA	129654956	129645347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_129647918_129648620_129648793_129654563
H1_mix_00090487	chrX	-	5497	10	FSM	ENSG00000188706.13	ENST00000371064.7	2473	10	-127	-2897	-127	856	multi-exon	FALSE	canonical	0	0	junction_4	65.486969771677	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATAGAGATTGCTTGCAC	12	True	NA	NA	False	AATATA	-22	NA	129843587	129802431	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_129806487_129810904_129811002_129811405_129811510_129812717_129812821_129813676_129813726_129814657_129814796_129823678_129823838_129828980_129829142_129841778_129842081_129843258
H1_mix_00090488	chrX	-	4571	11	FSM	ENSG00000188706.13	ENST00000357166.11	4571	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	62.6872395308647	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGCCTCATTTCTTTAC	378	False	129843910	-19	True	AATACA	-21	NA	129843886	129803287	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_129806487_129810904_129811002_129811405_129811510_129812717_129812821_129813676_129813726_129814657_129814796_129823678_129823838_129828980_129829142_129841778_129842081_129843258_129843327_129843695
H1_mix_00090489	chrX	-	4428	10	NNC	ENSG00000188706.13	novel	4571	11	NA	NA	50	-6	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	63.5470079722265	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGCTTCTGCCTCATTT	13	True	NA	-25	True	AATACA	-15	NA	129843836	129803293	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_129806487_129810904_129811002_129811405_129811510_129813660_129813726_129814657_129814796_129823678_129823838_129828980_129829142_129841778_129842081_129843258_129843327_129843695
H1_mix_00090490	chrX	-	4428	11	NNC	ENSG00000188706.13	novel	4571	11	NA	NA	-142	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	79.4143563847243	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTTTCTTTGTGCTTC	-3	True	NA	22	True	AATACA	-5	NA	129843602	129803303	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_129806487_129810904_129811002_129811405_129811510_129812717_129812821_129813676_129813726_129814657_129814796_129823678_129823838_129828980_129829142_129841778_129842081_129843258_129843327_129843538
H1_mix_00090491	chrX	-	2222	16	FSM	ENSG00000156709.15	ENST00000287295.8	2222	16	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_7	42.243526788794	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTCTCTTGTCAAGGG	9	True	NA	NA	False	AATAAA	-22	NA	130165841	130129361	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_130129629_130129969_130130167_130131674_130131800_130133312_130133456_130136044_130136186_130136642_130136732_130137077_130137186_130138592_130138702_130139794_130139872_130140532_130140618_130145478_130145570_130147492_130147624_130147751_130147877_130149468_130149569_130156460_130156604_130165550
H1_mix_00090494	chrX	-	4644	19	FSM	ENSG00000056277.16	ENST00000370978.9	4638	19	0	-6	0	6	multi-exon	FALSE	canonical	3	60	junction_7	18.773503787105	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATAGGAGCATTGCTTT	0	True	NA	39	True	AATAAA	-26	NA	130268899	130202700	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_130204993_130205116_130205154_130205296_130205416_130209652_130209716_130215192_130215334_130215790_130216102_130220348_130220481_130226758_130226906_130227681_130227783_130228976_130229135_130230509_130230728_130236213_130236321_130236468_130236640_130239581_130239694_130243562_130243700_130243799_130243866_130246858_130247006_130260418_130260466_130268761
H1_mix_00090496	chrX	-	5128	15	FSM	ENSG00000165675.19	ENST00000394363.6	5126	15	0	-2	0	2	multi-exon	FALSE	canonical	3	39	junction_6	8.8456146173787	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATGTGTGAGAAGTTTT	-7	True	NA	76	True	AATAAA	-23	NA	130903209	130622322	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_130625446_130627957_130628044_130631467_130631577_130634983_130635092_130637228_130637411_130656580_130656696_130665642_130665750_130667529_130667743_130669964_130670199_130679541_130679749_130688862_130689019_130703119_130703255_130783546_130783691_130901683_130901732_130903048
H1_mix_00090497	chrX	-	5217	16	FSM	ENSG00000165675.19	ENST00000338144.8	5215	16	0	-2	0	2	multi-exon	FALSE	canonical	2	6	junction_13	16.2234398325386	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATGTGTGAGAAGTTTT	-7	True	NA	76	True	AATAAA	-23	NA	130903209	130622322	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_130625446_130627957_130628044_130631467_130631577_130634983_130635092_130637228_130637411_130656580_130656696_130665642_130665750_130667529_130667743_130669964_130670199_130679541_130679749_130688862_130689019_130703119_130703255_130709242_130709332_130783546_130783691_130901683_130901732_130903048
H1_mix_00090499	chrX	-	4409	19	FSM	ENSG00000147255.19	ENST00000370910.5	4406	19	0	-3	0	3	multi-exon	TRUE	canonical	3	5	junction_17	32.5208859764207	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGTGGTCTTCTATTGG	12	True	NA	1	True	AATAAA	-32	NA	131289278	131273502	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_131273932_131274082_131274207_131274598_131274878_131274998_131275287_131275477_131275766_131275960_131276249_131276938_131277227_131277855_131278135_131278460_131278752_131279142_131279176_131279270_131279342_131281217_131281339_131281665_131281945_131282443_131282738_131282979_131283265_131285178_131285467_131285766_131286049_131286604_131286742_131289213
H1_mix_00090500	chrX	-	4464	20	FSM	ENSG00000147255.19	ENST00000361420.8	4461	20	0	-3	0	3	multi-exon	FALSE	canonical	3	47	junction_14	36.1070277303955	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGTGGTCTTCTATTGG	-16	True	NA	1	True	AATAAA	-32	NA	131289306	131273502	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_131273932_131274082_131274207_131274598_131274878_131274998_131275287_131275477_131275766_131275960_131276249_131276938_131277227_131277855_131278135_131278460_131278752_131279142_131279176_131279270_131279342_131281217_131281339_131281665_131281945_131282443_131282738_131282979_131283265_131285178_131285467_131285766_131286049_131286436_131286464_131286604_131286742_131289213
H1_mix_00090501	chrX	-	4479	20	FSM	ENSG00000147255.19	ENST00000370903.8	4476	20	0	-3	0	3	multi-exon	FALSE	canonical	3	11	junction_10	39.2578661595566	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGTGGTCTTCTATTGG	-16	True	NA	1	True	AATAAA	-32	NA	131289306	131273502	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_131273932_131274082_131274207_131274598_131274878_131274998_131275287_131275477_131275766_131275960_131276249_131276938_131277227_131277855_131278135_131278460_131278752_131279142_131279191_131279270_131279342_131281217_131281339_131281665_131281945_131282443_131282738_131282979_131283265_131285178_131285467_131285766_131286049_131286436_131286464_131286604_131286742_131289213
H1_mix_00090502	chrX	-	1820	5	FSM	ENSG00000147255.19	ENST00000370901.4	1820	5	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	15.5402702679201	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTAGTATAGCTTTTT	4	True	NA	0	True	AATAAA	-14	NA	131289286	131284165	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_131285467_131285766_131286049_131286436_131286464_131286604_131286742_131289213
H1_mix_00090503	chrX	-	1813	4	ISM	ENSG00000147255.19	ENST00000370910.5	4406	19	-28	10660	0	0	5prime_fragment	FALSE	canonical	3	5	junction_2	68.6650485246234	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTAGTATAGCTTTTT	-16	True	NA	0	True	AATAAA	-14	NA	131289306	131284165	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_131285467_131285766_131286049_131286604_131286742_131289213
H1_mix_00090504	chrX	-	619	3	FSM	ENSG00000147255.19	ENST00000651744.1	673	3	54	0	54	0	multi-exon	FALSE	canonical	3	161	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGTCCGGGCTAATTTTA	42	False	NA	NA	False	NA	NA	NA	131289375	131286143	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_131286464_131286604_131286742_131289213
H1_mix_00090505	chrX	-	3850	4	NIC	ENSG00000147255.19	novel	5413	27	NA	NA	178	-75220	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	5.24933858267454	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTTGAAATTTTTAAAAG	118	False	NA	NA	False	AATAAA	-43	NA	131578721	131361363	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_131364927_131368951_131369053_131389016_131389149_131578667
H1_mix_00090506	chrX	-	4469	11	FSM	ENSG00000213468.7	ENST00000663405.1	4468	11	16	-17	0	0	multi-exon	FALSE	canonical	2	15	junction_1	61.8401972829971	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGAGTTTGGCTTTTTTG	-19	True	NA	-7	True	AATAAA	-16	NA	131830621	131689737	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_131692637_131749305_131749459_131755597_131755747_131756610_131756710_131768548_131768697_131783886_131784040_131785156_131785259_131793993_131794116_131794296_131794467_131825221_131825366_131830291
H1_mix_00090508	chrX	-	4728	14	NIC	ENSG00000213468.7	novel	2812	13	NA	NA	33	-3	intron_retention	FALSE	canonical	2	6	junction_2	57.3918329138136	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTACAGAGTTGGGTT	107	False	NA	-9	True	AATAAA	-10	NA	131830552	131691525	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_131692637_131709497_131709557_131711650_131711721_131749305_131749459_131755597_131755747_131756610_131756710_131768548_131768697_131777622_131777745_131783886_131784040_131785156_131785259_131793993_131794116_131794296_131796332_131825221_131825366_131830291
H1_mix_00090512	chrX	-	893	4	FSM	ENSG00000213468.7	ENST00000658376.1	893	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	94.8484170781053	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCACTCATTCTGTCGCCC	-19	True	NA	NA	False	NA	NA	NA	131830621	131794113	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_131794467_131804971_131805038_131825221_131825366_131830291
H1_mix_00090516	chrX	-	2173	2	FSM	ENSG00000213468.7	ENST00000657242.1	2173	2	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTTGTTTGTTTGTT	NA	False	NA	NA	False	AATAAA	-18	NA	131830862	131823763	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_131825366_131830291
H1_mix_00090517	chrX	-	3896	4	FSM	ENSG00000123728.10	ENST00000342983.6	3896	4	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_3	31.7210060089875	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGGTTTCTTTAATTATT	1493	False	NA	-13	True	AATAAA	-21	NA	132218124	132203024	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_132205588_132214133_132214447_132216995_132217807_132217915
H1_mix_00090520	chrX	-	4959	9	FSM	ENSG00000076716.9	ENST00000370828.4	4959	9	0	0	0	0	multi-exon	FALSE	canonical	3	1004	junction_5	205.844867254445	876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAATTTCTGCTTCCCCT	-1	True	NA	-7	True	AATAAA	-21	NA	133415489	133300102	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_133303070_133303165_133303342_133304724_133304862_133305771_133305919_133306023_133306155_133311257_133311424_133324144_133324537_133339182_133339342_133414805
H1_mix_00090521	chrX	-	2267	8	FSM	ENSG00000147257.16	ENST00000370818.8	2267	8	0	0	0	0	multi-exon	FALSE	canonical	3	573	junction_6	43.5819659389298	225	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTGGCCCTTTTTTTGC	-7	True	NA	-28	True	AATAAA	-16	NA	133985594	133535744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_133536294_133596439_133596600_133661729_133661851_133692368_133692495_133699894_133700029_133753481_133754177_133953049_133953212_133985274
H1_mix_00090522	chrX	-	303	1	FSM	ENSG00000284499.1	ENST00000384840.3	75	1	0	-228	0	228	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTCTTTTTTTTTTAAAA	4634	False	NA	NA	False	AATAAA	-24	NA	134169452	134169149	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_134169100_134169500
H1_mix_00090525	chrX	-	4390	9	FSM	ENSG00000156504.17	ENST00000370790.5	4246	9	-144	0	-46	0	multi-exon	FALSE	canonical	3	75	junction_7	41.5314263540274	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTGTTTTAAAAGTCTGT	NA	False	NA	-17	True	AATAAA	-25	NA	134797278	134769565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_134772284_134781820_134781918_134785885_134785948_134787471_134787534_134788729_134788832_134789084_134789140_134789222_134789267_134793814_134793894_134796107
H1_mix_00090526	chrX	-	3519	10	ISM	ENSG00000156504.17	ENST00000493333.5	1078	11	832	-2508	-81	-4	3prime_fragment	FALSE	canonical	3	63	junction_7	48.7536006900712	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTACTAGTGTTTTAAAAG	920	False	NA	-22	True	AATAAA	-20	NA	134796355	134769570	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_134772284_134781820_134781918_134785885_134785948_134787471_134787534_134788729_134788832_134789084_134789140_134789222_134789267_134789579_134789637_134793814_134793894_134796107
H1_mix_00090528	chrX	-	3572	10	NIC	ENSG00000156504.17	novel	1078	11	NA	NA	2	-4	intron_retention	FALSE	canonical	3	41	junction_9	51.3840538265941	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTACTAGTGTTTTAAAAG	45	False	134797249	-22	True	AATAAA	-20	NA	134797230	134769570	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_134772284_134781820_134781918_134785885_134785948_134787471_134787534_134788729_134788832_134789084_134789140_134789222_134789267_134793814_134793894_134796107_134796356_134797120
H1_mix_00090530	chrX	-	3389	9	FSM	ENSG00000156504.17	ENST00000486347.5	1381	9	0	-2008	0	0	multi-exon	FALSE	canonical	3	75	junction_7	40.5924869895896	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTGTTTTAAAAGTCTGT	7	True	NA	-17	True	AATAAA	-25	NA	134796274	134769565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_134772284_134781820_134781918_134785885_134785951_134787471_134787534_134788729_134788832_134789084_134789140_134789222_134789267_134793814_134793894_134796107
H1_mix_00090532	chrX	-	2366	6	FSM	ENSG00000101928.13	ENST00000370783.8	2348	6	0	-18	0	18	multi-exon	FALSE	canonical	3	84	junction_1	44.7910705386687	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTATTTGACTTATCTT	-9	True	NA	-5	True	AATAAA	-36	NA	134915257	134887613	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_134889193_134891478_134891641_134896816_134897035_134899089_134899166_134899279_134899535_134915181
H1_mix_00090534	chrX	-	2030	1	FSM	ENSG00000212747.5	ENST00000391440.3	2030	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGAAGTTTTAGTCTT	-33	True	NA	-14	True	ATTAAA	-20	NA	135022542	135020512	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_135020500_135022500
H1_mix_00090535	chrX	-	1207	1	FSM	ENSG00000203950.7	ENST00000370775.3	1204	1	-6	3	0	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGGAGTCTCAATGAATA	15	True	NA	-71	True	AATAAA	-21	NA	135052141	135050934	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_135050900_135052100
H1_mix_00090536	chrX	-	660	2	FSM	ENSG00000203950.7	ENST00000522309.1	536	2	2	-126	2	0	multi-exon	FALSE	canonical	3	243	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGTCTCAATGAATATGG	17	True	NA	-68	True	AATAAA	-24	NA	135052139	135050931	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_135051369_135051916
H1_mix_00090537	chrX	-	2820	2	FSM	ENSG00000196972.9	ENST00000433425.4	2817	2	-16	13	-16	-13	multi-exon	FALSE	canonical	3	20	junction_1	0	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAAAATCCCAACTGGAGG	17	False	NA	NA	False	AAAAAG	-16	NA	135098728	135094997	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_135097122_135098032
H1_mix_00090538	chrX	-	4126	7	NIC	ENSG00000186376.15	novel	5611	7	NA	NA	0	8	combination_of_known_splicesites	FALSE	canonical	2	11	junction_6	10.1598337694188	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCAATGTTTGCTTTTTT	5	True	NA	5	True	AATAAA	-30	NA	135344109	135285782	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_135287847_135291008_135291136_135291471_135291564_135292280_135292474_135293729_135294259_135295767_135296040_135343260
H1_mix_00090539	chrX	-	5619	7	FSM	ENSG00000186376.15	ENST00000370766.8	5611	7	0	-8	0	8	multi-exon	FALSE	canonical	3	16	junction_6	8.91471941354422	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCAATGTTTGCTTTTTT	5	True	NA	5	True	AATAAA	-30	NA	135344109	135285782	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_135287847_135291008_135291136_135291471_135291564_135292280_135292474_135293729_135294259_135295767_135296040_135341767
H1_mix_00090541	chrX	-	5233	4	FSM	ENSG00000169446.6	ENST00000305963.3	5145	4	-87	-1	-46	1	multi-exon	FALSE	canonical	3	143	junction_1	7.40870359029762	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGGTTTTTTTTTCAA	7204	False	NA	2	True	AATAAA	-22	NA	135974075	135960586	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_135965184_135967389_135967494_135971057_135971111_135973596
H1_mix_00090543	chrX	-	4389	19	FSM	ENSG00000129680.16	ENST00000316077.14	4385	19	0	-4	0	4	multi-exon	FALSE	canonical	3	91	junction_8	17.3348468000224	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTTTTCATTATAATACT	-13	True	NA	NA	False	AATAAA	-19	NA	136251400	136216809	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_136218494_136219397_136219496_136219592_136219672_136220764_136220964_136222392_136222487_136224826_136224881_136225908_136226014_136227283_136227432_136228622_136228759_136230384_136230594_136230838_136230967_136231543_136232221_136236243_136236340_136240381_136240487_136241159_136241278_136244631_136244796_136246064_136246149_136246242_136246342_136251288
H1_mix_00090544	chrX	-	727	5	FSM	ENSG00000129680.16	ENST00000495432.1	774	5	47	0	47	0	multi-exon	FALSE	canonical	3	91	junction_4	24.3977457975117	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGTCACCATTTAGGAGC	4684	False	NA	NA	False	AAGAAA	-37	NA	136228948	136222392	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_136222487_136224826_136224881_136225908_136226014_136227283_136227432_136228622
H1_mix_00090545	chrX	-	5136	21	FSM	ENSG00000129675.16	ENST00000370620.5	4764	21	-377	5	-377	-2	multi-exon	FALSE	canonical	2	9	junction_8	3.69459064038223	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAAGTCTTTTGCTTCTTT	168	False	NA	NA	False	AATAAA	-15	NA	136767720	136665551	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_136668170_136669481_136669537_136672019_136672120_136675006_136675097_136676623_136676718_136677935_136677957_136679534_136679661_136680730_136680877_136681889_136681969_136682757_136682845_136685676_136685824_136687931_136687992_136690609_136690749_136706907_136707031_136708674_136708771_136713275_136713371_136732101_136732173_136743584_136743787_136745222_136745348_136747507_136747593_136767143
H1_mix_00090546	chrX	-	3558	1	FSM	ENSG00000225125.2	ENST00000413361.2	655	1	-7	-2896	-7	2896	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATCTTTTGTGTCTGTC	NA	False	NA	-4	True	AATAAA	-22	NA	136807884	136804326	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_136804300_136807900
H1_mix_00090547	chrX	-	2045	3	FSM	ENSG00000147274.14	ENST00000496459.2	2041	3	0	-4	0	-1	multi-exon	FALSE	canonical	3	858	junction_2	207	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTGGCAAGGGGCTCT	6796	False	NA	-10	True	AATAAA	-19	NA	136873982	136869187	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_136870418_136872267_136872346_136873245
H1_mix_00090548	chrX	-	3526	11	NIC	ENSG00000147274.14	novel	2012	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	858	junction_2	1173.8754661377	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTTTTTTGTGGCAAGG	5	True	NA	-16	True	AATAAA	-13	NA	136880722	136869193	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_136870418_136872267_136872346_136873245_136874453_136875085_136875169_136875257_136875384_136875470_136875586_136876502_136876656_136877914_136878087_136879016_136879124_136879318_136879454_136880596
H1_mix_00090549	chrX	-	4887	8	FSM	ENSG00000147274.14	ENST00000568578.5	4887	8	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	1565.15465754692	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTTTTTTGTGGCAAGG	5	True	NA	-16	True	AATAAA	-13	NA	136880722	136869193	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_136870418_136872267_136875169_136875257_136875384_136875470_136875586_136876502_136876656_136879016_136879124_136879318_136879454_136880596
H1_mix_00090550	chrX	-	2310	10	NIC	ENSG00000147274.14	novel	4887	8	NA	NA	6	-3	combination_of_known_junctions	FALSE	canonical	3	414	junction_2	1326.5698457132	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATCTTTTTTTGTGGCA	62	False	NA	-19	True	AATAAA	-10	NA	136880716	136869196	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_136870418_136872267_136872346_136875085_136875169_136875257_136875384_136875470_136875586_136876502_136876656_136877914_136878087_136879016_136879124_136879318_136879454_136880596
H1_mix_00090552	chrX	-	2148	8	FSM	ENSG00000147274.14	ENST00000562646.5	2148	8	0	0	0	0	multi-exon	FALSE	canonical	3	3712	junction_5	199.157101355709	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGACTTTCGCATTGCTTT	2	True	NA	-10	True	AGTAAA	-16	NA	136880725	136873957	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_136875169_136875257_136875384_136875470_136875586_136876502_136876656_136877914_136878087_136879016_136879124_136879318_136879454_136880596
H1_mix_00090553	chrX	-	547	2	Intergenic	novelGene_1741	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTGTTTGGTGGTCTCT	NA	False	NA	-2	True	AATAAA	-20	NA	138269722	138264395	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_138264704_138269483
H1_mix_00090554	chrX	-	19575	5	FSM	ENSG00000129682.16	ENST00000315930.11	19575	5	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_2	48.5148173241949	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTGTGTGATCATTGGC	-20	True	NA	-1	True	AATAAA	-25	NA	138711717	138614726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_138632987_138635456_138635656_138702983_138703088_138708817_138708929_138710816
H1_mix_00090555	chrX	-	1039	6	FSM	ENSG00000129682.16	ENST00000626909.2	1039	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	189.857209502299	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCATTATTTAGATTGAGC	-1	True	NA	NA	False	ACTAAA	-2	NA	139205023	138632677	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_138632987_138635456_138635656_138702983_138703088_138708817_138708929_139204058_139204272_139204920
H1_mix_00090557	chrX	-	6079	30	FSM	ENSG00000101974.15	ENST00000327569.7	6115	30	37	-1	37	0	multi-exon	FALSE	canonical	2	8	junction_29	44.2264199182701	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATCAGCCTCTTTTTTTT	NA	False	NA	-3	True	AATAAA	-21	NA	139832251	139726347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_139728963_139731650_139731756_139737915_139738070_139740990_139741095_139743558_139743625_139745721_139745858_139750024_139750153_139757807_139757868_139761960_139762107_139763315_139763419_139768259_139768435_139774689_139774954_139782546_139782729_139783163_139783268_139785225_139785300_139787172_139787245_139788191_139788344_139789326_139789489_139796272_139796471_139797175_139797327_139798272_139798355_139798678_139798744_139800059_139800111_139802235_139802340_139804470_139804600_139814877_139814986_139816862_139816944_139819337_139819428_139826703_139826824_139832153
H1_mix_00090558	chrX	-	5974	29	FSM	ENSG00000101974.15	ENST00000361648.6	6010	29	37	-1	37	0	multi-exon	FALSE	canonical	2	8	junction_28	56.6706831309683	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATCAGCCTCTTTTTTTT	NA	False	NA	-3	True	AATAAA	-21	NA	139832251	139726347	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_139728963_139737915_139738070_139740990_139741095_139743558_139743625_139745721_139745858_139750024_139750153_139757807_139757868_139761960_139762107_139763315_139763419_139768259_139768435_139774689_139774954_139782546_139782729_139783163_139783268_139785225_139785300_139787172_139787245_139788191_139788344_139789326_139789489_139796272_139796471_139797175_139797327_139798272_139798355_139798678_139798744_139800059_139800111_139802235_139802340_139804470_139804600_139814877_139814986_139816862_139816944_139819337_139819428_139826703_139826824_139832153
H1_mix_00090559	chrX	-	7111	30	FSM	ENSG00000101974.15	ENST00000682941.1	7019	30	-31	-61	-14	59	multi-exon	FALSE	canonical	3	168	junction_14	23.5196176370515	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTGATGGGAACTAAGT	NA	False	NA	58	True	ATTAAA	-16	NA	139933084	139726286	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_139728963_139731650_139731756_139737915_139738070_139740990_139741095_139743558_139743625_139745721_139745858_139750024_139750153_139757807_139757868_139761960_139762107_139763315_139763419_139768259_139768435_139774689_139774954_139782546_139782729_139783163_139783268_139785225_139785300_139787172_139787245_139788191_139788344_139789326_139789489_139796272_139796471_139797175_139797327_139798272_139798355_139798678_139798744_139800059_139800111_139802235_139802340_139804470_139804600_139814877_139814986_139816862_139816944_139819337_139819428_139826703_139826824_139932015
H1_mix_00090560	chrX	-	2090	1	FSM	ENSG00000134595.9	ENST00000370536.5	2085	1	0	-5	0	5	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTCCTGATAATTTTGC	-3	False	NA	-12	True	AATAAA	-18	NA	140505069	140502979	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_140503000_140505100
H1_mix_00090562	chrX	-	784	2	FSM	ENSG00000182195.9	ENST00000460721.1	784	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGATTGTCTTTTAATG	231	False	NA	-16	True	AATAAA	-19	NA	141177016	141175748	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_141176409_141176892
H1_mix_00090563	chrX	-	8718	2	FSM	ENSG00000179542.16	ENST00000356928.2	8736	2	18	0	18	0	multi-exon	FALSE	canonical	3	26	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTAGCCATTCAGTGT	-9	True	NA	NA	False	AATAAA	-20	NA	143636083	143622789	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_143631159_143635734
H1_mix_00090564	chrX	-	3380	2	FSM	ENSG00000179542.16	ENST00000338017.8	3357	2	-23	0	-23	0	multi-exon	FALSE	canonical	3	34	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	876	False	NA	NA	False	NA	NA	NA	143635227	143628127	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_143631159_143634878
H1_mix_00090565	chrX	-	1684	1	FSM	ENSG00000231686.1	ENST00000445173.1	988	1	-177	-519	-177	519	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTTCAGACCTGGTGCG	NA	False	NA	NA	False	NA	NA	NA	146620761	146619077	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_146619100_146620800
H1_mix_00090566	chrX	-	7578	9	FSM	ENSG00000010404.18	ENST00000340855.11	7580	9	0	2	0	-2	multi-exon	TRUE	canonical	3	121	junction_1	27.7083020049948	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATCGTGTGTGCAATTC	4	True	NA	NA	False	AATAAA	-16	NA	149505306	149476989	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_149483219_149486924_149487099_149490313_149490441_149496345_149496517_149498106_149498308_149500948_149501038_149503311_149503490_149504156_149504294_149505034
H1_mix_00090568	chrX	-	1454	9	NIC	ENSG00000010404.18	novel	1529	9	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	3	11	junction_6	75.3753109446323	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCATTTTCTGTCATTC	4	True	NA	-7	True	AATAAA	-19	NA	149505306	149487137	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_149487314_149490313_149490441_149496345_149496517_149498106_149498308_149500948_149501038_149502074_149502178_149503311_149503490_149504156_149504294_149505034
H1_mix_00090570	chrX	-	1863	1	FSM	ENSG00000241769.7	ENST00000618820.1	513	1	-260	-1090	-260	186	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAGGTGAATGTGAAGAG	6261	False	NA	NA	False	NA	NA	NA	149534688	149532825	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_149532800_149534700
H1_mix_00090571	chrX	-	1801	4	FSM	ENSG00000267978.6	ENST00000595065.6	1814	4	13	0	-2	0	multi-exon	FALSE	canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCCTGTTCACTGGCTC	7920	False	NA	NA	False	AATAAA	-15	NA	149587446	149581652	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_149583245_149583319_149583389_149583546_149583634_149587393
H1_mix_00090572	chrX	-	3751	3	FSM	ENSG00000269556.9	ENST00000616857.4	3742	3	2	-11	2	11	multi-exon	FALSE	canonical	3	250	junction_1	16	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATCTTCTTTGCTGGA	6470	False	NA	NA	False	AATAAA	-28	NA	149602218	149596544	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_149598256_149599553_149599678_149600302
H1_mix_00090573	chrX	-	2720	7	FSM	ENSG00000269556.9	ENST00000600449.8	2720	7	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_1	19.4050394371038	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTGCATGATGTGTATCT	6	True	NA	NA	False	AATAAA	-17	NA	149631792	149596555	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_149598256_149599553_149599678_149600302_149600480_149603986_149604071_149608626_149608835_149611286_149611464_149631542
H1_mix_00090574	chrX	-	907	4	FSM	ENSG00000269556.9	ENST00000507237.5	903	4	0	-4	0	4	multi-exon	FALSE	canonical	3	298	junction_2	4.71404520791032	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAAAGTTTAATTGATAC	38	True	NA	-11	True	AATAAA	-20	NA	149631698	149603704	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_149604071_149608626_149608835_149611286_149611464_149631542
H1_mix_00090575	chrX	-	804	4	NNC	ENSG00000269556.9	novel	903	4	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	40	junction_2	123.386475037673	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTCTAAAGTTTAATTG	1	True	NA	-15	True	AATAAA	-16	NA	149631797	149603708	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_149604071_149608626_149608835_149631542_149631736_149631756
H1_mix_00090576	chrX	-	1440	6	FSM	ENSG00000197021.9	ENST00000462691.5	1440	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	74.9682599504617	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTCGGTATCAGGGCAA	34	True	NA	NA	False	AATAAA	-20	NA	149938435	149929526	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_149930082_149932588_149932768_149933621_149933904_149934004_149934138_149937432_149937481_149938192
H1_mix_00090578	chrX	-	1333	5	FSM	ENSG00000197021.9	ENST00000370406.8	1333	5	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_4	40.3693881548879	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTAGTGTTTGAGGCTT	-22	True	NA	NA	False	AATAAA	-15	NA	149938491	149932196	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_149932768_149933621_149933904_149934004_149934138_149937432_149937481_149938192
H1_mix_00090579	chrX	-	1129	6	FSM	ENSG00000197021.9	ENST00000370409.7	1129	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	108.680449023732	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGCACCTGATCCCTTTG	-3	True	NA	NA	False	NA	NA	NA	149938472	149932578	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_149932768_149933621_149933904_149934004_149934138_149934376_149934574_149937432_149937481_149938192
H1_mix_00090581	chrX	-	3630	12	NNC	ENSG00000102181.21	novel	3567	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_10	9.88529252295868	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTCTTCTGATGGTGT	-24	True	NA	-26	True	AATAAA	-16	NA	150898668	150766335	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_150769102_150770303_150770370_150776173_150776294_150777443_150777483_150793690_150793757_150795205_150795290_150795417_150795487_150814861_150814937_150816006_150816079_150828305_150828369_150831230_150831294_150898521
H1_mix_00090583	chrX	-	6177	3	FSM	ENSG00000102287.19	ENST00000486255.1	6176	3	0	-1	0	0	multi-exon	FALSE	canonical	1	3	junction_1	6	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAAGGTGTGGCTGGTTTC	NA	False	NA	-9	True	AATAAA	-16	NA	151959723	151953123	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_151955085_151955367_151955568_151955707
H1_mix_00090584	chrX	-	310	3	FSM	ENSG00000102287.19	ENST00000474932.1	430	3	0	120	0	-120	multi-exon	FALSE	canonical	1	1	junction_1	0.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTCCACATGCTCAGAT	4942	False	NA	NA	False	NA	NA	NA	151969736	151961344	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_151961366_151962422_151962644_151969668
H1_mix_00090585	chrX	-	1583	5	FSM	ENSG00000147400.10	ENST00000370277.5	1413	5	0	-170	0	170	multi-exon	FALSE	canonical	1	190	junction_3	129.265231210871	208	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTGAGGGAGAATAGAAAAT	-13	True	NA	NA	False	ATTAAA	-37	NA	152830757	152826823	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_152827931_152828536_152828675_152829148_152829278_152829601_152829761_152830707
H1_mix_00090587	chrX	-	1306	10	FSM	ENSG00000213397.12	ENST00000370211.10	1306	10	0	0	0	0	multi-exon	FALSE	canonical	3	427	junction_2	33.8967204065672	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTTGCCTCCAGCCTGCT	-2	True	NA	-19	True	AAGAAA	-15	NA	153470576	153447667	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153447910_153454393_153454509_153455541_153455767_153456264_153456365_153456492_153456652_153457136_153457229_153462609_153462672_153464987_153465056_153469145_153469262_153470449
H1_mix_00090588	chrX	-	1503	11	ISM	ENSG00000183479.13	ENST00000330912.7	2509	13	-9	3195	-9	-2948	5prime_fragment	FALSE	canonical	3	70	junction_3	177.330313257491	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTTGCCTCCAGCCTGCT	471	False	NA	-19	True	AAGAAA	-15	NA	153470596	153447667	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_153447910_153454393_153454509_153454876_153455054_153455541_153455767_153456264_153456365_153456492_153456652_153457136_153457229_153462609_153462672_153464987_153465056_153469145_153469262_153470449
H1_mix_00090590	chrX	-	1172	5	FSM	ENSG00000262919.8	ENST00000440428.5	1164	5	0	-8	0	1	multi-exon	FALSE	canonical	3	98	junction_1	47.0710898535396	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGACCCTTGGCTTTGCTC	65	False	NA	-4	True	AATAAA	-18	NA	153599117	153587923	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153588395_153592505_153592734_153594546_153594680_153596003_153596188_153598961
H1_mix_00090591	chrX	-	1254	5	FSM	ENSG00000262919.8	ENST00000576892.8	1253	5	0	-1	0	1	multi-exon	FALSE	canonical	3	135	junction_1	33.007574888198	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGACCCTTGGCTTTGCTC	-6	True	NA	-4	True	AATAAA	-18	NA	153599139	153587923	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153588455_153592505_153592734_153594546_153594680_153596003_153596188_153598961
H1_mix_00090593	chrX	-	1631	12	NIC	ENSG00000130822.16	novel	1473	12	NA	NA	99	3	combination_of_known_junctions	FALSE	canonical	3	9	junction_11	7.63095046233939	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTGGTGACCTGGGGGT	1265	False	NA	-3	True	AATAAA	-18	NA	153686689	153669729	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_153670131_153670449_153670595_153670743_153670832_153670917_153670997_153671077_153671191_153671284_153671361_153671548_153671673_153671879_153672019_153672125_153672201_153672565_153672698_153673008_153673079_153686500
H1_mix_00090595	chrX	-	1804	8	FSM	ENSG00000185825.17	ENST00000458587.8	1789	8	0	-15	0	15	multi-exon	FALSE	canonical	3	56	junction_7	1011.96462792099	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGTGGGGAGGGCTCTG	-1	True	NA	-1	True	AATAAA	-38	NA	153724066	153700476	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153700976_153702006_153702108_153702934_153703059_153703958_153704095_153715541_153715690_153720871_153720973_153723152_153723289_153723507
H1_mix_00090596	chrX	-	1299	8	FSM	ENSG00000185825.17	ENST00000345046.12	1284	8	0	-15	0	15	multi-exon	FALSE	canonical	3	2639	junction_3	189.846447081287	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGTGGGGAGGGCTCTG	5	True	NA	-1	True	AATAAA	-38	NA	153724387	153700476	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153700976_153702006_153702108_153702934_153703059_153703958_153704095_153715541_153715690_153720871_153720973_153723152_153723289_153724333
H1_mix_00090599	chrX	-	573	4	FSM	ENSG00000185825.17	ENST00000645802.1	573	4	0	0	0	0	multi-exon	FALSE	canonical	3	2875	junction_3	146.244847962434	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCCCTGTCTGTGTTAG	-4	True	NA	NA	False	NA	NA	NA	153724396	153715416	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153715690_153720871_153720973_153723152_153723289_153724333
H1_mix_00090600	chrX	-	1308	12	NIC	ENSG00000067829.20	novel	1335	13	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_10	91.6007326110225	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCGTGGGCCTCCCTCA	154	False	NA	-35	True	AATAAA	-17	NA	153794358	153785765	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_153785974_153786211_153786273_153786354_153786450_153786800_153786948_153787050_153787154_153787463_153787598_153787822_153787956_153788074_153788136_153789711_153789825_153790194_153790293_153790809_153790852_153794245
H1_mix_00090601	chrX	-	1338	13	FSM	ENSG00000067829.20	ENST00000217901.10	1335	13	0	-3	0	1	multi-exon	TRUE	canonical	3	258	junction_6	28.7560380132977	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCGTGGGCCTCCCTCAC	0	True	NA	-34	True	AATAAA	-18	NA	153794375	153785764	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153785974_153786211_153786273_153786354_153786450_153786800_153786948_153787050_153787154_153787463_153787598_153787822_153787956_153788074_153788136_153789711_153789825_153790194_153790293_153790563_153790576_153790809_153790852_153794245
H1_mix_00090603	chrX	-	3766	8	FSM	ENSG00000067840.13	ENST00000393758.7	3761	8	0	-5	0	5	multi-exon	TRUE	canonical	3	17	junction_6	6.1842459491181	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCCTGTGTTCATTCTT	-2	True	NA	0	True	AATAAA	-32	NA	153830544	153802160	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153804901_153805096_153805208_153805504_153805607_153806070_153806134_153806741_153806841_153807278_153807370_153808341_153808596_153830238
H1_mix_00090604	chrX	-	4094	8	FSM	ENSG00000067840.13	ENST00000164640.8	3689	8	-400	-5	-325	5	multi-exon	FALSE	canonical	3	8	junction_6	8.80630571852711	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCCTGTGTTCATTCTT	13	True	NA	0	True	AATAAA	-32	NA	153830890	153802160	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153804901_153805096_153805208_153805504_153805607_153806070_153806134_153806741_153806841_153807278_153807370_153808359_153808596_153830238
H1_mix_00090605	chrX	-	5009	26	FSM	ENSG00000198910.14	ENST00000361981.7	5004	26	0	-5	0	5	multi-exon	FALSE	canonical	3	57	junction_12	10.3240302208004	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTATTTCGCGGAACA	395	False	NA	2	True	AATAAA	-21	NA	153875944	153861508	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153862895_153863476_153863550_153863882_153864018_153864321_153864478_153864584_153864705_153864820_153864995_153865087_153865211_153865298_153865501_153865703_153865820_153866648_153866872_153867053_153867125_153867355_153867554_153867799_153867911_153867997_153868123_153868301_153868459_153868560_153868728_153868840_153868953_153869519_153869664_153869802_153869935_153870055_153870241_153870387_153870500_153870789_153870961_153871056_153871180_153872151_153872355_153872591_153872698_153875760
H1_mix_00090606	chrX	-	4655	27	FSM	ENSG00000198910.14	ENST00000370055.5	4655	27	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_26	11.0568728793372	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCACTGCCCACTGGCCGG	7	True	NA	NA	False	NA	NA	NA	153886154	153861952	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153862895_153863476_153863550_153863882_153864018_153864321_153864478_153864584_153864705_153864820_153864995_153865087_153865211_153865298_153865501_153865703_153865820_153866648_153866872_153867053_153867125_153867355_153867554_153867799_153867911_153867997_153868123_153868301_153868459_153868560_153868728_153868840_153868953_153869519_153869664_153869802_153869935_153870055_153870241_153870387_153870500_153870789_153870961_153871056_153871180_153872151_153872355_153872591_153872698_153875760_153875945_153886064
H1_mix_00090611	chrX	-	3256	22	FSM	ENSG00000089820.16	ENST00000350060.10	3254	22	0	-2	0	0	multi-exon	FALSE	canonical	3	79	junction_14	16.9506419653814	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGAGCCAGCTCTCTGTCT	20	True	NA	-3	True	CATAAA	-22	NA	153926264	153907375	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153907963_153909069_153909170_153909442_153909536_153909740_153909925_153910011_153910086_153910170_153910405_153910505_153910612_153910699_153910835_153910921_153911000_153911128_153911190_153912699_153912803_153913023_153913052_153913217_153913303_153913408_153913601_153913777_153913880_153918831_153919054_153919154_153919284_153920625_153920809_153921096_153921160_153921364_153921528_153921604_153921810_153926135
H1_mix_00090612	chrX	-	1752	10	FSM	ENSG00000089820.16	ENST00000494397.5	1752	10	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_6	20.3348511880345	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTGGCGATTCATAAAGA	9395	False	NA	-42	True	NA	NA	NA	153912737	153907414	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153907963_153909069_153909170_153909442_153909536_153909740_153909925_153910011_153910086_153910170_153910612_153910699_153910835_153910921_153911000_153911128_153911190_153912699
H1_mix_00090615	chrX	-	1603	8	FSM	ENSG00000102030.16	ENST00000464845.6	1603	8	0	0	0	0	multi-exon	FALSE	canonical	3	469	junction_3	25.7206341369758	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTCCTGTCTGTGTTGTA	9742	False	153935065	-11	True	NA	NA	NA	153935037	153929224	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153930224_153930762_153930848_153932070_153932116_153932315_153932432_153932538_153932585_153933942_153934002_153934376_153934476_153934883
H1_mix_00090616	chrX	-	1075	2	FSM	ENSG00000102030.16	ENST00000482485.1	1075	2	0	0	0	0	multi-exon	FALSE	canonical	3	540	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGGCCCGAGTACAAGGAA	3820	False	NA	69	True	NA	NA	NA	153931440	153929826	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153930224_153930762
H1_mix_00090617	chrX	-	837	7	FSM	ENSG00000102030.16	ENST00000370009.5	837	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	196.669562125578	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTGTGTGTGAGCGCG	-7	True	NA	-28	True	AATAAA	-20	NA	153935015	153929923	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153930224_153930762_153930848_153932315_153932432_153932538_153932585_153933942_153934002_153934376_153934476_153934883
H1_mix_00090618	chrX	-	1082	7	FSM	ENSG00000102030.16	ENST00000466877.5	1080	7	0	-2	0	0	multi-exon	FALSE	canonical	3	494	junction_2	19.3792558049982	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTGTGTGTGAGCGCG	-7	True	NA	-28	True	AATAAA	-20	NA	153935015	153929923	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153930224_153930762_153930848_153932070_153932432_153932538_153932585_153933942_153934002_153934376_153934476_153934883
H1_mix_00090619	chrX	-	850	8	NIC	ENSG00000102030.16	novel	1603	8	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	31	junction_5	170.526914507442	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGAACTTTGTGTGTGAG	3	True	NA	-32	True	AATAAA	-16	NA	153935005	153929927	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_153930224_153930762_153930848_153932070_153932116_153932315_153932432_153932538_153932585_153933960_153934002_153934376_153934476_153934883
H1_mix_00090623	chrX	-	1334	11	FSM	ENSG00000102032.13	ENST00000393700.8	1334	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	4.94368283772331	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCGGCTGTGCGCGCGTC	-6	True	NA	-1	True	AATAAA	-17	NA	153944643	153935268	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153935405_153935488_153935577_153940101_153940234_153941477_153941654_153941949_153942032_153942854_153943080_153943545_153943719_153943894_153943971_153944079_153944156_153944308_153944419_153944583
H1_mix_00090625	chrX	-	8380	26	FSM	ENSG00000172534.14	ENST00000369984.4	8375	26	0	-5	0	3	multi-exon	FALSE	canonical	3	47	junction_7	112.635454453738	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGGTGTCTCACTGTGTCC	17	True	NA	-1	True	ATTAAA	-22	NA	153971184	153947553	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153949387_153949552_153949617_153950242_153950544_153950812_153950999_153951349_153951488_153951588_153951708_153951840_153952162_153952513_153953091_153953606_153953771_153954065_153955543_153956190_153956412_153956624_153956764_153956917_153957061_153957313_153957534_153957781_153957887_153958024_153958250_153958568_153958767_153959330_153959492_153959801_153960162_153960234_153960415_153961541_153961649_153962221_153962307_153963224_153963434_153964123_153964285_153964577_153964727_153970647
H1_mix_00090626	chrX	-	8879	26	FSM	ENSG00000172534.14	ENST00000310441.12	8876	26	0	-3	0	3	multi-exon	FALSE	canonical	3	279	junction_19	73.1283802637526	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGGTGTCTCACTGTGTCC	9	True	NA	-1	True	ATTAAA	-22	NA	153971818	153947553	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153949387_153949552_153949617_153950242_153950544_153950812_153950999_153951349_153951488_153951588_153951708_153951840_153952159_153952513_153952959_153953606_153953771_153954065_153955543_153956190_153956412_153956624_153956764_153956917_153957061_153957313_153957534_153957781_153957887_153958024_153958250_153958568_153958767_153959330_153959492_153959801_153960162_153960234_153960415_153961541_153961649_153962221_153962307_153963224_153963434_153964123_153964285_153964577_153964727_153970647
H1_mix_00090628	chrX	-	3581	14	FSM	ENSG00000184216.14	ENST00000369980.8	3581	14	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_13	17.2067139778971	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGGGCTCTACTTGTGGA	-31	True	NA	-7	True	AATAAA	-15	NA	154019902	154010506	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154011918_154012528_154012679_154013042_154013434_154014041_154014279_154016031_154016098_154016436_154016645_154016948_154017068_154018005_154018121_154018290_154018356_154018598_154018788_154018974_154019079_154019196_154019329_154019430_154019599_154019676
H1_mix_00090632	chrX	-	10596	4	FSM	ENSG00000169057.24	ENST00000303391.11	10467	4	-42	-87	-22	87	multi-exon	FALSE	canonical	3	83	junction_2	23.5702260395516	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCCTGGACACAGGTAGC	NA	False	NA	84	True	NA	NA	NA	154097759	154021485	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154031451_154032206_154032558_154092183_154092308_154097603
H1_mix_00090633	chrX	-	10343	3	FSM	ENSG00000169057.24	ENST00000453960.7	10343	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	42.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGGTCTGGGCTTTCAT	-21	True	NA	-3	True	GATAAA	-18	NA	154097717	154021572	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154031451_154032206_154032558_154097603
H1_mix_00090634	chrX	-	4098	5	FSM	ENSG00000169057.24	ENST00000628176.2	1712	5	0	-2386	0	2386	multi-exon	FALSE	canonical	3	7	junction_1	45.0194402452985	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTCCACCTGCTCTGCT	1	True	NA	NA	False	NA	NA	NA	154097737	154027852	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154031287_154031395_154031451_154032206_154032558_154092183_154092308_154097603
H1_mix_00090636	chrX	-	8254	47	NNC	ENSG00000196924.19	novel	8240	47	NA	NA	0	45151	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	606.537308511403	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGGGTGGCATGCACCTG	-4	True	NA	NA	False	NA	NA	NA	154371222	154303372	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_154303412_154348530_154349037_154349361_154349566_154349648_154349868_154350030_154350208_154350908_154351042_154351580_154351697_154351883_154352022_154352180_154352448_154352552_154352676_154352771_154352925_154353000_154353205_154353295_154353458_154353553_154353728_154353914_154354044_154354150_154354292_154354380_154354484_154354615_154354712_154354824_154355073_154357433_154357624_154358198_154358356_154358444_154358569_154358983_154359155_154359245_154359407_154359483_154359647_154359731_154359906_154359989_154360588_154361307_154361571_154361669_154361788_154361978_154362149_154362241_154362333_154362417_154362579_154362660_154362785_154364021_154364166_154364258_154364373_154364525_154364720_154364820_154364958_154365135_154365260_154365348_154365487_154366023_154366225_154366307_154366471_154366561_154366640_154366731_154366851_154367396_154367545_154367640_154367739_154367841_154368091_154370872
H1_mix_00090637	chrX	-	8241	47	FSM	ENSG00000196924.19	ENST00000369856.8	8240	47	0	-1	0	0	multi-exon	FALSE	canonical	3	125	junction_19	651.651737694357	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCGTGGCTGTAGCTTT	-4	True	NA	-6	True	AATAAA	-18	NA	154371222	154348528	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154349037_154349361_154349566_154349648_154349868_154350030_154350208_154350908_154351042_154351580_154351697_154351883_154352022_154352180_154352448_154352552_154352676_154352771_154352925_154353000_154353205_154353295_154353458_154353553_154353728_154353914_154354044_154354150_154354292_154354380_154354484_154354615_154354712_154354824_154355073_154357250_154357275_154357433_154357624_154358198_154358356_154358444_154358569_154358983_154359155_154359245_154359407_154359483_154359647_154359731_154359906_154359989_154360588_154361307_154361571_154361669_154361788_154361978_154362149_154362241_154362333_154362417_154362579_154362660_154362785_154364021_154364166_154364258_154364373_154364525_154364720_154364820_154364958_154365135_154365260_154365348_154365487_154366023_154366225_154366307_154366471_154366561_154366640_154366731_154366851_154367396_154367545_154367640_154367739_154367841_154368091_154370872
H1_mix_00090638	chrX	-	8278	46	FSM	ENSG00000196924.19	ENST00000360319.9	8278	46	0	0	0	0	multi-exon	FALSE	canonical	3	1149	junction_39	539.487722259864	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCGTGGCTGTAGCTTT	3920	False	NA	-6	True	AATAAA	-18	NA	154371283	154348528	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154349037_154349361_154349566_154349648_154349868_154350030_154350208_154350908_154351042_154351580_154351697_154351883_154352022_154352180_154352448_154352552_154352676_154352771_154352925_154353000_154353205_154353295_154353458_154353553_154353728_154353914_154354044_154354150_154354292_154354380_154354484_154354615_154354712_154354824_154355073_154357433_154357624_154358198_154358356_154358444_154358569_154358983_154359155_154359245_154359407_154359483_154359647_154359731_154359906_154359989_154360588_154361307_154361571_154361669_154361788_154361978_154362149_154362241_154362333_154362417_154362579_154362660_154362785_154364021_154364166_154364258_154364373_154364525_154364720_154364820_154364958_154365135_154365260_154365348_154365487_154366023_154366225_154366307_154366471_154366561_154366640_154366731_154366851_154367396_154367545_154367640_154367739_154367841_154368091_154370872
H1_mix_00090640	chrX	-	8541	47	FSM	ENSG00000196924.19	ENST00000676696.1	8541	47	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_39	704.745247514405	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGCGTGGCTGTAGCT	3958	False	NA	-8	True	AATAAA	-16	NA	154371245	154348530	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154349037_154349361_154349566_154349648_154349868_154350030_154350208_154350908_154351042_154351580_154351697_154351883_154352022_154352180_154352448_154352552_154352676_154352771_154352925_154353000_154353205_154353295_154353458_154353553_154353728_154353914_154354044_154354150_154354292_154354380_154354484_154354615_154354712_154354824_154355073_154357250_154357275_154357433_154357624_154358198_154358356_154358444_154358569_154358983_154359155_154359245_154359407_154359483_154359647_154359731_154359906_154359989_154360588_154361307_154361571_154361669_154361788_154361978_154362149_154362241_154362333_154362417_154362579_154362660_154362785_154364021_154364166_154364258_154364373_154364525_154364720_154364820_154364958_154365135_154365260_154365348_154365487_154365744_154366225_154366307_154366471_154366561_154366640_154366731_154366851_154367396_154367545_154367640_154367739_154367841_154368091_154370872
H1_mix_00090641	chrX	-	8507	48	FSM	ENSG00000196924.19	ENST00000369850.10	8507	48	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_47	699.073266777037	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGCGTGGCTGTAGCT	-1	True	NA	-8	True	AATAAA	-16	NA	154374634	154348530	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154349037_154349361_154349566_154349648_154349868_154350030_154350208_154350908_154351042_154351580_154351697_154351883_154352022_154352180_154352448_154352552_154352676_154352771_154352925_154353000_154353205_154353295_154353458_154353553_154353728_154353914_154354044_154354150_154354292_154354380_154354484_154354615_154354712_154354824_154355073_154357250_154357275_154357433_154357624_154358198_154358356_154358444_154358569_154358983_154359155_154359245_154359407_154359483_154359647_154359731_154359906_154359989_154360588_154361307_154361571_154361669_154361788_154361978_154362149_154362241_154362333_154362417_154362579_154362660_154362785_154364021_154364166_154364258_154364373_154364525_154364720_154364820_154364958_154365135_154365260_154365348_154365487_154366023_154366225_154366307_154366471_154366561_154366640_154366731_154366851_154367396_154367545_154367640_154367739_154367841_154368091_154370872_154371362_154374505
H1_mix_00090642	chrX	-	5374	22	FSM	ENSG00000196924.19	ENST00000490936.5	5374	22	0	0	0	0	multi-exon	FALSE	canonical	3	1927	junction_21	328.211528219586	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTGGCGCTGCTTGTCT	9255	False	NA	-125	True	NA	NA	NA	154359638	154348647	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154349037_154349361_154349566_154349648_154349868_154350030_154351697_154351883_154352022_154352180_154352448_154352552_154352676_154352771_154352925_154353000_154353205_154353295_154353458_154353553_154353728_154353914_154354044_154354150_154354292_154354380_154354484_154354615_154354712_154354824_154355073_154357433_154357624_154358198_154358356_154358444_154358569_154358983_154359155_154359245_154359407_154359483
H1_mix_00090648	chrX	-	2610	8	FSM	ENSG00000013563.14	ENST00000369807.6	2610	8	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_6	8.83176086632785	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTCTTGGTCCGCATGT	-1	True	NA	NA	False	AATAAA	-28	NA	154409254	154401235	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154402842_154402941_154403191_154403268_154403382_154403521_154403623_154404827_154404915_154404994_154405084_154405433_154405656_154409111
H1_mix_00090649	chrX	-	3010	10	FSM	ENSG00000013563.14	ENST00000369809.5	3008	10	0	-2	0	0	multi-exon	FALSE	canonical	3	28	junction_9	16.1665712101038	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTCTTGGTCCGCATGT	11	True	NA	NA	False	AATAAA	-28	NA	154412090	154401235	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154402842_154402941_154403191_154403268_154403382_154403521_154403623_154404827_154404915_154404994_154405084_154405433_154405656_154409111_154409197_154409417_154409676_154411890
H1_mix_00090651	chrX	-	2652	9	FSM	ENSG00000013563.14	ENST00000014935.7	2652	9	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_8	12.4096736459909	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGGCTGTAAACTGAGA	2062	False	NA	NA	False	AATAAA	-23	NA	154410039	154401757	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154402842_154402941_154403191_154403268_154403382_154403521_154403623_154404827_154404915_154404994_154405084_154405433_154405656_154409111_154409197_154409417
H1_mix_00090652	chrX	-	2252	9	FSM	ENSG00000013563.14	ENST00000309585.9	2249	9	0	-3	0	0	multi-exon	FALSE	canonical	3	23	junction_8	16.7332005306815	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGGCTGTAAACTGAGA	-11	True	NA	NA	False	AATAAA	-23	NA	154412112	154401757	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154402842_154402941_154403191_154403268_154403382_154403521_154403623_154404827_154404915_154404994_154405084_154405433_154405656_154409111_154409197_154411890
H1_mix_00090654	chrX	-	608	2	FSM	ENSG00000197180.3	ENST00000360656.3	633	2	33	-8	33	8	multi-exon	FALSE	canonical	3	35	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTTTGTTACTGCAGCCA	-9	True	NA	8	True	AATAAA	-31	NA	154428479	154424369	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154424626_154428127
H1_mix_00090655	chrX	-	949	3	FSM	ENSG00000196976.8	ENST00000357360.5	967	3	24	-6	24	6	multi-exon	FALSE	canonical	3	1749	junction_1	95.5	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAGTTTATTTGCAGCT	15	True	NA	-16	True	AATAAA	-19	NA	154479257	154477768	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154478059_154478282_154478412_154478727
H1_mix_00090656	chrX	-	2330	4	FSM	ENSG00000102178.13	ENST00000369660.9	2327	4	0	-3	0	3	multi-exon	FALSE	canonical	3	316	junction_2	29.6348143611905	3563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTGCGTCCAATCATTT	-9	True	NA	-1	True	AATAAA	-25	NA	154486615	154483713	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154485650_154485770_154485980_154486227_154486334_154486536
H1_mix_00090657	chrX	-	2667	2	FSM	ENSG00000126903.16	ENST00000263512.5	2161	2	5	-511	5	511	multi-exon	FALSE	canonical	3	88	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACTCCTCCCGGGGCGCA	NA	False	NA	NA	False	NA	NA	NA	154490685	154486794	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154489083_154490306
H1_mix_00090659	chrX	-	1805	9	FSM	ENSG00000071889.17	ENST00000447601.7	1793	9	0	-12	0	0	multi-exon	FALSE	canonical	3	45	junction_4	11.3571288184999	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTGTTGTCAGTGCGGA	-6	True	NA	-1	True	AATAAA	-30	NA	154516232	154506158	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507862_154508288_154508348_154508473_154508598_154511847_154511872_154512822_154512937_154515759
H1_mix_00090660	chrX	-	1771	10	FSM	ENSG00000071889.17	ENST00000359889.9	1712	10	21	-80	0	80	multi-exon	TRUE	canonical	3	36	junction_9	15.2663593693802	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCCCACAGCCCGAGCAG	11	True	NA	79	True	NA	NA	NA	154516215	154506078	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507862_154508288_154508348_154508473_154508598_154511847_154511872_154512822_154512937_154515759_154515813_154515909
H1_mix_00090661	chrX	-	1817	9	FSM	ENSG00000071889.17	ENST00000434658.6	1817	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	29.0817812384317	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACCCCTTAATAAAGTGA	-16	True	NA	-46	True	NA	NA	NA	154516242	154506203	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154508288_154508348_154508473_154508598_154511847_154511872_154512313_154512412_154512822_154512937_154515759
H1_mix_00090665	chrX	-	2229	13	FSM	ENSG00000160211.19	ENST00000393562.10	2223	13	0	-6	0	6	multi-exon	FALSE	canonical	3	51	junction_3	9.24061085041941	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCCTTGTCATTTGCTTC	-1	True	NA	-1	True	ATTAAA	-20	NA	154546846	154531384	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154532091_154532187_154532281_154532385_154532463_154532566_154532803_154532941_154533129_154533575_154533670_154534034_154534161_154534337_154534497_154535167_154535386_154535936_154536046_154536140_154536179_154546035_154546164_154546788
H1_mix_00090666	chrX	-	1659	13	FSM	ENSG00000160211.19	ENST00000393564.6	1661	13	2	0	2	0	multi-exon	FALSE	canonical	3	14	junction_12	17.4186601729933	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGGGCACCCACCTCCA	-2	True	NA	NA	False	NA	NA	NA	154547570	154531999	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154532091_154532187_154532281_154532385_154532463_154532566_154532803_154532941_154533129_154533575_154533670_154534034_154534161_154534337_154534497_154535167_154535386_154535936_154536046_154536140_154536179_154546035_154546164_154547467
H1_mix_00090669	chrX	-	225	3	FSM	ENSG00000160219.12	ENST00000475685.1	298	3	73	0	73	0	multi-exon	FALSE	canonical	1	2	junction_2	0.5	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCCTTTCAGAAGAACAAA	NA	False	NA	NA	False	AATGAA	-30	NA	154696019	154678289	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154678295_154680131_154680249_154695916
H1_mix_00090670	chrX	-	2006	12	FSM	ENSG00000130830.15	ENST00000369534.8	2006	12	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_8	7.10022697809696	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTTGTAACTCTGGGTT	-26	True	NA	0	True	AATAAA	-22	NA	154805485	154778683	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154779354_154781238_154781314_154781599_154781803_154783426_154783508_154784027_154784109_154785050_154785158_154786203_154786401_154789953_154790023_154790982_154791069_154791768_154791848_154792141_154792286_154805271
H1_mix_00090671	chrX	-	2380	3	FSM	ENSG00000130830.15	ENST00000491955.5	2378	3	0	-2	0	0	multi-exon	FALSE	canonical	3	73	junction_2	1.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTTGTAACTCTGGGTT	NA	False	NA	0	True	AATAAA	-22	NA	154783234	154778683	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154779354_154781238_154781314_154781599
H1_mix_00090672	chrX	-	585	3	FSM	ENSG00000130830.15	ENST00000493871.1	585	3	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTTTAGAGTTGACCCC	NA	False	NA	NA	False	NA	NA	NA	154786225	154783652	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154784109_154785050_154785158_154786203
H1_mix_00090674	chrX	-	2617	5	FSM	ENSG00000185010.15	ENST00000330287.10	2620	5	0	3	0	1	multi-exon	TRUE	canonical	2	3	junction_4	4.60298815988049	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCCTTTGAGAATTGTG	NA	False	NA	NA	False	AATAAA	-19	NA	154886317	154835790	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154837753_154860431_154860609_154861717_154861867_154863082_154863228_154886133
H1_mix_00090676	chrX	-	599	3	NNC	ENSG00000182712.16	novel	881	3	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	101	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGTTTTGTACTAAATG	-18	True	NA	-2	True	AATAAA	-18	NA	155071124	155061621	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_155061992_155063965_155064034_155070963
H1_mix_00090677	chrX	-	881	3	FSM	ENSG00000182712.16	ENST00000369484.8	881	3	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_2	40	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGTTTTGTACTAAATG	130	False	155071165	-2	True	AATAAA	-18	NA	155071136	155061621	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_155061992_155063965_155064034_155070693
H1_mix_00090678	chrX	-	2184	5	FSM	ENSG00000214827.11	ENST00000369476.8	2184	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	6.28490254498827	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGGATATGCCGCAGA	130	False	155071165	NA	False	AATAAA	-21	NA	155071136	155064033	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_155065400_155065485_155065538_155065618_155065790_155065905_155066058_155070693
H1_mix_00090679	chrX	-	3415	2	FSM	ENSG00000155961.5	ENST00000369454.4	3413	2	0	-2	0	2	multi-exon	FALSE	canonical	3	101	junction_1	0	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAAGTGTGTGTTATAGC	-14	True	NA	-4	True	AGTAAA	-25	NA	155264491	155258232	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_155261230_155264073
H1_mix_00090680	chrX	-	1738	2	Genic_Genomic	ENSG00000277150.2	novel	1707	1	NA	NA	0	40187	multi-exon	FALSE	non_canonical	0	0	junction_1	0	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTGATAACTGTTGTGT	-4	True	NA	NA	False	NA	NA	NA	155458620	155416726	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chrX_-_155416758_155456913
H1_mix_00090681	chrX	-	1739	1	FSM	ENSG00000277150.2	ENST00000622749.2	1707	1	-35	3	-35	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTGTGGTTTTGGTGTC	1316	False	NA	NA	False	GATAAA	-17	NA	155458655	155456916	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_155456900_155458700
H1_mix_00090682	chrX	-	3963	8	FSM	ENSG00000185973.12	ENST00000334398.8	3952	8	0	-11	0	11	multi-exon	FALSE	canonical	3	59	junction_1	28.1519202230487	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCACATTCTCTGTATGT	-3	True	NA	NA	False	AATAAA	-35	NA	155612952	155488999	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_155491667_155492356_155492496_155506897_155507135_155511672_155511793_155513985_155514266_155524455_155524633_155545095_155545278_155612791
H1_mix_00090683	chrX	-	1250	7	FSM	ENSG00000185973.12	ENST00000369439.4	1248	7	0	-2	0	2	multi-exon	FALSE	canonical	3	36	junction_1	33.2949779329489	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTGAGATCTTTCTTC	72	False	NA	NA	False	AATAAA	-19	NA	155612877	155492532	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_155492701_155506897_155507135_155511672_155511793_155513985_155514266_155524455_155524633_155545095_155545278_155612791
H1_mix_00090684	chrX	+	3322	1	Intergenic	novelGene_1631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTGATATTGTTGCTTTG	336	False	NA	28	True	ATTAAA	-17	NA	2743009	2746331	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_2743000_2746300
H1_mix_00090685	chrX	+	410	1	Intergenic	novelGene_1633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGGAAGCAGAAAGTATATG	NA	False	NA	NA	False	NA	NA	NA	3554674	3555084	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_3554700_3555100
H1_mix_00090686	chrX	+	224	1	Intergenic	novelGene_1634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAGAAGAGTATACGGGTT	NA	False	NA	NA	False	NA	NA	NA	4542785	4543009	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_4542800_4543000
H1_mix_00090687	chrX	+	1875	1	Intergenic	novelGene_1639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCCACTGCTTGACTAGA	5220	False	NA	NA	False	NA	NA	NA	7737824	7739699	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_7737800_7739700
H1_mix_00090688	chrX	+	297	1	Intergenic	novelGene_1642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGACAACTTTGTT	NA	False	NA	NA	False	NA	NA	NA	13197436	13197733	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_13197400_13197700
H1_mix_00090689	chrX	+	1650	1	Intergenic	novelGene_1643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTAAAGCTTAATCGGGCA	NA	False	NA	NA	False	NA	NA	NA	13933707	13935357	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_13933700_13935400
H1_mix_00090690	chrX	+	381	1	Intergenic	novelGene_1644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTGTCATATTCTTTCT	NA	False	NA	30	True	AATAAA	-41	NA	15647062	15647443	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_15647100_15647400
H1_mix_00090692	chrX	+	214	1	Intergenic	novelGene_1656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCGAGACACTTTAACTAA	NA	False	NA	NA	False	NA	NA	NA	30105891	30106105	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_30105900_30106100
H1_mix_00090694	chrX	+	1735	1	FSM	ENSG00000288856.1	ENST00000685658.1	1074	1	-659	-2	-659	2	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTCTCTTCATATTTTC	249	False	NA	11	True	AATAAA	-18	NA	40171336	40173071	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_40171300_40173100
H1_mix_00090695	chrX	+	644	1	Intergenic	novelGene_1664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGGCAGGAATTATAGAAC	2057	False	NA	NA	False	NA	NA	NA	47509786	47510430	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_47509800_47510400
H1_mix_00090696	chrX	+	304	1	Intergenic	novelGene_1667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	799	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCAAATGCTTTTTTAAGC	NA	False	NA	NA	False	NA	NA	NA	51772589	51772893	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_51772600_51772900
H1_mix_00090698	chrX	+	326	1	Intergenic	novelGene_1674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTAATTTTTGATTCA	NA	False	NA	NA	False	TTTAAA	-11	NA	83747437	83747763	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_83747400_83747800
H1_mix_00090700	chrX	+	262	1	Intergenic	novelGene_1680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTTGGGGGTTCTTGCCCT	NA	False	NA	NA	False	NA	NA	NA	90777567	90777829	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_90777600_90777800
H1_mix_00090701	chrX	+	287	1	Intergenic	novelGene_1684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTCCCCGAGGAGCTTGC	NA	False	NA	NA	False	NA	NA	NA	93024896	93025183	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_93024900_93025200
H1_mix_00090702	chrX	+	2080	1	Intergenic	novelGene_1698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCCCTCTTCTGTCTTCT	NA	False	NA	NA	False	AAGAAA	-26	NA	101006848	101008928	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_101006800_101008900
H1_mix_00090703	chrX	+	565	1	Intergenic	novelGene_1699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTGGGCTGAGTCCGAAA	NA	False	NA	NA	False	NA	NA	NA	109869932	109870497	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_109869900_109870500
H1_mix_00090704	chrX	+	451	1	Intergenic	novelGene_1701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAATCATTACAGGGACAC	NA	False	NA	NA	False	NA	NA	NA	111544154	111544605	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_111544200_111544600
H1_mix_00090705	chrX	+	234	1	Intergenic	novelGene_1702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTGTCATAAAATAGGCAAA	NA	False	NA	NA	False	NA	NA	NA	111545145	111545379	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_111545100_111545400
H1_mix_00090706	chrX	+	665	1	Intergenic	novelGene_1703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTCCTTTTTAGTTATCC	NA	False	NA	NA	False	NA	NA	NA	111545972	111546637	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_111546000_111546600
H1_mix_00090709	chrX	+	5474	1	Intergenic	novelGene_1709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1265	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGTGGTCTCTTCACA	NA	False	NA	37	True	AATAAA	-25	NA	114467024	114472498	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_114467000_114472500
H1_mix_00090710	chrX	+	1926	1	Intergenic	novelGene_1710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTTTGTGATTTTGAGG	1174	False	NA	NA	False	AATAGA	-37	NA	114601401	114603327	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_114601400_114603300
H1_mix_00090712	chrX	+	442	1	Intergenic	novelGene_1715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAGAGCATCCCTTACTT	NA	False	NA	NA	False	NA	NA	NA	116104851	116105293	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_116104900_116105300
H1_mix_00090714	chrX	+	324	1	Intergenic	novelGene_1719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGAGGAAGGTATTGAGGA	NA	False	NA	NA	False	AGTAAA	-38	NA	119319964	119320288	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_119320000_119320300
H1_mix_00090715	chrX	+	306	1	Intergenic	novelGene_1720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTTTTTTTTAAATTGTG	NA	False	NA	NA	False	NA	NA	NA	120497772	120498078	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_120497800_120498100
H1_mix_00090716	chrX	+	705	1	Intergenic	novelGene_1738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTCCGTCTCAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	131722498	131723203	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_131722500_131723200
H1_mix_00090717	chrX	+	236	1	Intergenic	novelGene_1744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTTCAGCTGTACTCAC	NA	False	NA	NA	False	NA	NA	NA	149319203	149319439	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_149319200_149319400
H1_mix_00090720	chrX	+	1847	8	NNC	ENSG00000182378.15	novel	5287	8	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	108.988859194743	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGTATGAATTTTATTA	2	True	NA	15	True	AATAAA	-21	NA	276361	303356	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_276395_284166_284315_288732_288870_290647_290777_291498_291655_293034_293219_299096_299393_302592
H1_mix_00090721	chrX	+	2000	8	NNC	ENSG00000182378.15	novel	5318	7	NA	NA	17	-114	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_4	106.294546484027	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAGGGAGCCTCCCTGAC	4	True	NA	NA	False	NA	NA	NA	281397	303239	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_281685_284166_284315_288732_288870_290647_290793_291498_291655_293034_293219_299096_299393_302592
H1_mix_00090723	chrX	+	681	3	FSM	ENSG00000182378.15	ENST00000448477.6	828	3	147	0	147	0	multi-exon	FALSE	canonical	3	296	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAACGGCGCTGGTGGAGG	2339	False	NA	NA	False	NA	NA	NA	283880	290757	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_284315_288732_288870_290647
H1_mix_00090724	chrX	+	3364	2	NNC	ENSG00000226179.6	novel	428	2	NA	NA	-2141	657	intron_retention	TRUE	canonical	0	0	junction_1	0	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAGAAAGAAAGAAA	356	False	NA	NA	False	NA	NA	NA	318848	322508	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_321976_322271
H1_mix_00090725	chrX	+	840	4	FSM	ENSG00000236017.8	ENST00000425740.7	840	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	3.68178700572909	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAACTGCAATGGGTTGG	8743	False	NA	-99	True	NA	NA	NA	1401810	1413915	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_1402226_1403460_1403586_1412742_1412889_1413761
H1_mix_00090726	chrX	+	1100	7	FSM	ENSG00000196433.13	ENST00000381233.8	989	7	-110	-1	6	1	multi-exon	FALSE	canonical	1	2	junction_4	3.82970843102535	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTCTTGTTCTTGGTGT	4	True	NA	3	True	AATAAA	-16	NA	1615064	1643082	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_1615269_1623138_1623314_1624268_1624399_1627702_1627772_1629820_1629940_1636437_1636561_1642802
H1_mix_00090727	chrX	+	904	9	NIC	ENSG00000223773.8	novel	1030	10	NA	NA	-11	-65	combination_of_known_splicesites	FALSE	canonical	3	15	junction_8	27.4305942334467	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACATTTAGTTTTATCTT	-9	True	NA	-50	True	NA	NA	NA	2609362	2638264	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_2609482_2610995_2611039_2612149_2612219_2615815_2615970_2618739_2618785_2619428_2619498_2622689_2622735_2623384_2623454_2637973
H1_mix_00090729	chrX	+	2869	5	FSM	ENSG00000223773.8	ENST00000414513.7	3071	5	0	202	0	163	multi-exon	FALSE	canonical	3	24	junction_2	28.2787464361488	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCCCATGGTGCTGTTG	7247	False	NA	NA	False	NA	NA	NA	2616618	2638492	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_2618785_2619428_2619498_2623384_2623454_2626596_2626643_2637973
H1_mix_00090730	chrX	+	627	8	FSM	ENSG00000002586.20	ENST00000449611.6	604	8	-23	0	-23	0	multi-exon	FALSE	canonical	3	21	junction_1	518.916925442025	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTCTCAGTCCGCCGGT	148	False	NA	NA	False	AAAAAG	-23	NA	2691476	2726373	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_2691696_2714421_2714455_2717604_2717653_2719660_2719706_2720355_2720425_2722626_2722675_2723313_2723365_2726259
H1_mix_00090732	chrX	+	3237	10	NIC	ENSG00000056998.20	novel	3192	11	NA	NA	-80	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_2	91.9864455930302	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATGTGGCCTCCTTCCA	27	False	NA	27	True	ATTAAA	-13	NA	2828741	2882817	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_2828976_2830060_2830196_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2875809_2875915_2877199_2877308_2881051
H1_mix_00090733	chrX	+	2852	8	FSM	ENSG00000056998.20	ENST00000381161.5	2852	8	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_7	127.804218894945	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATGTGGCCTCCTTCCA	2	True	NA	27	True	ATTAAA	-13	NA	2828913	2882817	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_2828976_2830060_2830196_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2881051
H1_mix_00090734	chrX	+	3180	11	NNC	ENSG00000056998.20	novel	1293	9	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	103.338085912213	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGGCCTCCTTCCAGTG	237	False	NA	30	True	ATTAAA	-16	NA	2829236	2882820	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_2829269_2830060_2830196_2843212_2843355_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2875809_2875915_2877199_2877308_2881051
H1_mix_00090737	chrX	+	3111	8	NIC	ENSG00000056998.20	novel	1293	9	NA	NA	-182	-3	combination_of_known_junctions	FALSE	canonical	3	54	junction_7	107.418882541807	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCCATGTGGCCTCCTT	598	False	NA	24	True	ATTAAA	-10	NA	2829878	2882814	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_2830196_2843212_2843355_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2881051
H1_mix_00090738	chrX	+	3009	9	NIC	ENSG00000056998.20	novel	3192	11	NA	NA	31	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_8	114.177972372082	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGGCCTCCTTCCAGTG	49	False	NA	30	True	ATTAAA	-16	NA	2830091	2882820	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_2830196_2843212_2843355_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2875809_2875915_2881051
H1_mix_00090742	chrX	+	323	2	Intergenic	novelGene_1632	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTATCTGTGGAGTAAC	NA	False	NA	NA	False	NA	NA	NA	3553252	3560161	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_3553352_3559937
H1_mix_00090743	chrX	+	5495	17	FSM	ENSG00000101849.18	ENST00000424279.6	5415	17	-80	0	-69	0	multi-exon	FALSE	canonical	1	1	junction_1	25.7681974534503	1016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTTGGTGGGTGTGCTTT	6348	False	NA	10	True	AATAAA	-22	NA	9463250	9719740	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_9463463_9501779_9501850_9640272_9640361_9654214_9654323_9684042_9684189_9688016_9688276_9691578_9691712_9692112_9692255_9693148_9693213_9693321_9693420_9697368_9697430_9704992_9705115_9709247_9709323_9709632_9709761_9711610_9711777_9714901_9715004_9716219
H1_mix_00090746	chrX	+	545	1	FSM	ENSG00000234469.4	ENST00000445307.4	995	1	-21	471	-21	-471	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCACTGCCATTCAAGTGG	NA	False	NA	NA	False	NA	NA	NA	9967336	9967881	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_9967300_9967900
H1_mix_00090748	chrX	+	2314	13	FSM	ENSG00000005302.19	ENST00000398527.7	2329	13	15	0	-11	0	multi-exon	FALSE	canonical	3	3	junction_1	19.006395122578	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAAGCCTGTCTTGTTT	10	False	NA	-19	True	NA	NA	NA	11758570	11775726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_11758774_11759792_11759876_11760402_11760499_11760836_11760938_11761499_11761583_11762129_11762253_11762836_11762998_11763779_11763939_11765466_11765730_11768572_11768683_11772155_11772256_11772620_11772706_11774979
H1_mix_00090749	chrX	+	2073	7	FSM	ENSG00000005302.19	ENST00000473380.2	6258	7	221	3964	0	784	multi-exon	FALSE	canonical	3	63	junction_5	5.93717104351896	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATTCTTGTTCTCTAGAC	926	False	NA	NA	False	NA	NA	NA	11759622	11765035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_11759876_11760402_11760499_11760836_11760938_11761499_11761583_11762129_11762253_11762836_11762998_11763779
H1_mix_00090750	chrX	+	3352	8	FSM	ENSG00000005302.19	ENST00000649851.1	3426	8	0	74	0	0	multi-exon	FALSE	canonical	3	63	junction_5	5.823947745897	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATTGGTTGATTGAAGAT	-1	True	NA	-98	True	TATAAA	-30	NA	11759656	11767876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_11759876_11760402_11760499_11760836_11760938_11761499_11761583_11762129_11762253_11762836_11762998_11763779_11763939_11765466
H1_mix_00090752	chrX	+	3244	5	NNC	ENSG00000176896.8	novel	2988	2	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3.74165738677394	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCCTTACTCTCCAAAATA	-13	True	NA	7	True	AATAAA	-18	NA	13653147	13665409	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_13653189_13655288_13655374_13659651_13659769_13661030_13661123_13662500
H1_mix_00090754	chrX	+	4311	23	FSM	ENSG00000046651.16	ENST00000682953.1	4299	23	-12	0	0	0	multi-exon	FALSE	canonical	3	10	junction_11	40.2904742346077	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTATTTCTCATTCATTAT	3	True	NA	-37	True	NA	NA	NA	13734744	13769311	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_13735084_13735247_13735347_13736107_13736297_13736477_13736679_13738845_13738915_13739001_13739033_13744414_13744520_13746318_13746456_13746779_13746954_13749426_13749534_13751248_13751369_13752703_13753442_13755150_13755243_13756577_13756768_13757659_13757791_13758336_13758449_13760114_13760721_13761084_13761212_13762343_13762445_13767126_13767285_13768053_13768225_13768717_13768786_13769065
H1_mix_00090755	chrX	+	3338	21	NIC	ENSG00000046651.16	novel	3296	22	NA	NA	1	-1	intron_retention	FALSE	canonical	3	23	junction_9	30.00599940012	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTATTTTTGTCTTAAATT	3	True	NA	8	True	AATAAA	-20	NA	13734789	13769356	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_13735084_13735247_13735347_13736477_13736679_13738845_13738915_13739001_13739033_13744414_13744520_13746318_13746456_13746779_13746954_13749426_13749534_13753367_13753442_13755150_13755243_13756577_13756768_13757659_13757791_13758336_13758449_13760114_13760721_13761084_13761212_13762343_13762445_13767126_13767285_13768053_13768225_13768717_13768786_13769065
H1_mix_00090757	chrX	+	829	1	FSM	ENSG00000233247.3	ENST00000411687.1	547	1	-122	-160	-122	160	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGAAAACGCCTACTTGC	NA	False	NA	NA	False	AAAAAG	-45	NA	14244259	14245088	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_14244300_14245100
H1_mix_00090759	chrX	+	7022	6	NIC	ENSG00000186312.10	novel	843	4	NA	NA	0	14	intron_retention	TRUE	canonical	3	4	junction_1	42.9110708325952	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATAGAGATTGTCATATT	NA	False	NA	NA	False	AATAAA	-35	NA	15674931	15703738	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_15675025_15675689_15675779_15681000_15681048_15688660_15688859_15692962_15693059_15697239
H1_mix_00090761	chrX	+	461	3	FSM	ENSG00000169239.13	ENST00000479740.5	529	3	68	0	1	0	multi-exon	FALSE	canonical	3	11	junction_2	1	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCTGGGGTTCTGAGCA	84	False	NA	NA	False	NA	NA	NA	15749970	15772563	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_15750166_15764577_15764776_15772495
H1_mix_00090762	chrX	+	1637	1	Intergenic	novelGene_1647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGAATCAGCCAGGCTGC	NA	False	NA	68	True	NA	NA	NA	16157891	16159528	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_16157900_16159500
H1_mix_00090763	chrX	+	3736	2	ISM	ENSG00000182798.10	ENST00000400003.1	1379	3	948	-2357	948	2357	3prime_fragment	FALSE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTAGTGGAGGTTCTAGC	NA	False	NA	NA	False	AATACA	-33	NA	16168660	16173821	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_16168909_16170333
H1_mix_00090764	chrX	+	1529	3	Intergenic	novelGene_1651	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	41	junction_2	25.5	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCGGGTCTTCATTTTCT	681	False	NA	16	True	AATAAA	-30	NA	16577084	16584007	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_16577286_16581567_16581717_16582828
H1_mix_00090765	chrX	+	7771	18	FSM	ENSG00000169891.18	ENST00000303843.7	7771	18	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_11	4.85641586836477	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGGTTTTATGGAGTCT	80	False	NA	19	True	AATAAA	-15	NA	16946861	17153272	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_16947135_17006220_17006345_17022122_17022272_17025061_17025186_17029525_17029624_17047346_17047483_17052381_17052446_17054807_17054951_17062437_17062533_17068401_17068472_17069939_17069994_17074113_17074160_17077270_17077408_17103717_17103780_17133823_17133908_17135260_17135407_17138855_17138962_17147412
H1_mix_00090766	chrX	+	11824	7	ISM	ENSG00000008086.13	ENST00000379989.6	3463	22	161762	14906	16264	-1473	internal_fragment	FALSE	canonical	0	0	junction_3	1.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTATAATTCATATGGAAA	NA	False	NA	NA	False	NA	NA	NA	18603949	18638723	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_18604869_18608810_18608913_18609464_18609571_18613151_18613276_18619866_18619967_18625127_18625248_18628370
H1_mix_00090767	chrX	+	3706	4	FSM	ENSG00000131828.14	ENST00000492364.1	611	4	-23	-3072	-9	0	multi-exon	FALSE	canonical	3	1112	junction_1	126.093439780012	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGCTAACCAGGTAATTA	-38	True	NA	NA	False	NA	NA	NA	19343912	19354570	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_19344095_19349311_19349372_19349936_19350111_19351280
H1_mix_00090770	chrX	+	4664	21	FSM	ENSG00000149970.16	ENST00000642359.1	5360	21	13	683	13	118	multi-exon	FALSE	canonical	3	6	junction_20	18.0471604414656	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGATGGTTCTGGTATA	20	False	NA	NA	False	TTTAAA	-11	NA	21374310	21642917	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_21374962_21426496_21426661_21432611_21432815_21440693_21440782_21470765_21470808_21490458_21490579_21497786_21497847_21501519_21501589_21516484_21516632_21526866_21527001_21531855_21532068_21561470_21561561_21563237_21563453_21590571_21590621_21591021_21591195_21594973_21595048_21595323_21595396_21601281_21601350_21606778_21606880_21609070_21609618_21641532
H1_mix_00090771	chrX	+	4067	19	FSM	ENSG00000149970.16	ENST00000645791.1	6590	19	0	2523	0	118	multi-exon	FALSE	canonical	3	6	junction_18	17.8840573185404	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGATGGTTCTGGTATA	97	False	NA	NA	False	TTTAAA	-11	NA	21374670	21642917	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_21374962_21426496_21426661_21432611_21432815_21440693_21440782_21470765_21470808_21490458_21490579_21497786_21497847_21501519_21501589_21526866_21527001_21531855_21532068_21563237_21563453_21590571_21590621_21591021_21591195_21594973_21595048_21595323_21595396_21601281_21601350_21606778_21606880_21609070_21609618_21641532
H1_mix_00090772	chrX	+	2754	1	FSM	ENSG00000230797.3	ENST00000429584.3	2754	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGAGTGTGGGGCGCA	42	False	NA	NA	False	AATAAA	-5	NA	21855986	21858740	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_21856000_21858700
H1_mix_00090773	chrX	+	1819	2	NNC	ENSG00000174028.6	novel	681	2	NA	NA	-172	966	at_least_one_novel_splicesite	FALSE	non_canonical	3	679	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCATATTTACAAAAGTTC	-12	True	NA	NA	False	NA	NA	NA	23075585	23077733	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_23076328_23076656
H1_mix_00090774	chrX	+	3381	3	FSM	ENSG00000165186.12	ENST00000379361.5	12883	3	-558	10060	-558	1206	multi-exon	FALSE	canonical	1	1	junction_2	4.5	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGGAAAGGACA	163	False	NA	NA	False	TTTAAA	-33	NA	23334290	23394314	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_23335227_23379590_23380252_23392530
H1_mix_00090776	chrX	+	603	3	FSM	ENSG00000005889.16	ENST00000428571.5	600	3	-3	0	-3	0	multi-exon	FALSE	canonical	3	15	junction_1	8	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTCTATACATGTGTCT	160	False	NA	NA	False	NA	NA	NA	24149625	24179530	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_24149795_24172714_24172801_24179182
H1_mix_00090777	chrX	+	7771	10	FSM	ENSG00000005889.16	ENST00000304543.10	7612	10	-100	-59	0	59	multi-exon	FALSE	canonical	3	17	junction_1	10.1336744581959	2999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTCCATGAAGTTTGAG	163	False	NA	NA	False	NA	NA	NA	24149628	24216314	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_24149795_24151690_24151801_24152719_24152831_24172714_24172801_24179182_24179771_24207325_24207476_24207711_24207856_24208217_24208371_24208899_24209041_24210192
H1_mix_00090778	chrX	+	7513	9	FSM	ENSG00000005889.16	ENST00000379188.7	7513	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	16.4905275840405	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGCATCTGTACCGACTT	-19	True	NA	NA	False	NA	NA	NA	24149723	24216255	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_24149795_24172714_24172801_24173606_24173724_24179182_24179771_24207325_24207476_24207711_24207856_24208217_24208371_24208899_24209041_24210192
H1_mix_00090779	chrX	+	2422	15	FSM	ENSG00000101868.13	ENST00000677890.1	2399	15	-23	0	0	0	multi-exon	FALSE	canonical	3	136	junction_11	11.5230470035012	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATATCCCGTTTTCTCTA	-2	True	NA	NA	False	ATTAAA	-23	NA	24693917	24728628	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_24694005_24699424_24699550_24703250_24703348_24704388_24704470_24714553_24714670_24715140_24715204_24716361_24716455_24716883_24716972_24717289_24717492_24717579_24717759_24723154_24723268_24724334_24724452_24725980_24726056_24726932_24727072_24727781
H1_mix_00090782	chrX	+	5254	9	NNC	ENSG00000101868.13	novel	2668	12	NA	NA	-3160	4272	intron_retention	FALSE	canonical	2	6	junction_8	60.4182040034293	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCAATGATTGTATTCCCT	4	False	NA	NA	False	NA	NA	NA	24806114	24846255	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_24809931_24810707_24810801_24812657_24812864_24814978_24815112_24821451_24821584_24826426_24826602_24841651_24841831_24843545_24843678_24845867
H1_mix_00090783	chrX	+	235	1	FSM	ENSG00000236683.3	ENST00000415560.1	1062	1	204	623	204	-623	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGCCGCCACCCCTGTC	306	False	NA	NA	False	NA	NA	NA	26748232	26748467	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_26748200_26748500
H1_mix_00090784	chrX	+	231	1	FSM	ENSG00000232368.1	ENST00000431458.1	528	1	-71	368	-71	-368	mono-exon	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGGCTGAGGAAAAGTGC	131	False	NA	NA	False	NA	NA	NA	30630226	30630457	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_30630200_30630500
H1_mix_00090786	chrX	+	200	1	FSM	ENSG00000236285.1	ENST00000458237.1	837	1	255	382	255	-382	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGCTGCTGATGAAGATG	NA	False	NA	NA	False	AGTAAA	-1	NA	32206156	32206356	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_32206200_32206400
H1_mix_00090787	chrX	+	4529	4	FSM	ENSG00000130962.18	ENST00000543642.5	4509	4	-21	1	0	0	multi-exon	FALSE	canonical	2	5	junction_1	19.4821855949366	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATTTTTTTTCTGCCATG	-21	True	NA	25	True	AATAAA	-18	NA	37349308	37457291	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_37349470_37406208_37406260_37425839_37426001_37453135
H1_mix_00090793	chrX	+	12663	45	NNC	ENSG00000124486.14	novel	12543	45	NA	NA	-105	0	at_least_one_novel_splicesite	FALSE	canonical	3	390	junction_13	364.17568741152	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGGTTTTCCCTTTATTT	485	False	NA	NA	False	AATAAA	-16	NA	41085339	41236579	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_41086110_41123470_41123725_41128999_41129146_41131456_41131537_41134724_41134838_41136803_41137023_41140655_41140772_41140965_41141218_41141292_41141432_41143290_41143444_41144521_41144627_41148368_41148576_41150920_41151058_41152932_41153082_41162789_41162878_41165871_41166215_41167481_41167578_41168006_41168219_41169994_41170236_41170469_41170620_41171837_41171959_41183997_41184129_41184396_41184676_41186516_41186643_41187991_41188118_41189308_41189476_41196250_41196360_41196591_41196739_41197363_41197511_41198527_41198751_41201059_41201281_41205302_41205494_41210508_41210683_41214567_41214710_41215898_41216653_41217219_41217344_41218371_41218598_41219101_41219232_41223216_41223403_41224741_41224963_41225048_41225138_41229252_41229410_41229566_41229780_41230500_41230597_41232386
H1_mix_00090796	chrX	+	5594	17	FSM	ENSG00000215301.11	ENST00000645080.1	5594	17	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	199.9769420302	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTGTGTTTTTTTTTTT	0	True	NA	13	True	NA	NA	NA	41334161	41349891	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_41334298_41337407_41337466_41337690_41339084_41341483_41341617_41342494_41342654_41342736_41342837_41343215_41343352_41343736_41343823_41344029_41344129_41344238_41344400_41345179_41345325_41345403_41345549_41346228_41346411_41346504_41346623_41346858_41347013_41347314_41347452_41347639
H1_mix_00090799	chrX	+	3377	4	FSM	ENSG00000215301.11	ENST00000647477.1	3377	4	0	0	0	0	multi-exon	FALSE	canonical	3	645	junction_3	54.7560245290162	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTGTTTAGTTGTGTGT	5562	False	NA	3	True	AAAACA	-41	NA	41345494	41349881	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_41345549_41346228_41346411_41346504_41346623_41346858
H1_mix_00090803	chrX	+	5791	29	FSM	ENSG00000147050.17	ENST00000382899.9	5778	29	-13	0	-13	0	multi-exon	FALSE	canonical	3	47	junction_12	90.6087406244619	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGTAGTATAATAGTAG	-12	True	NA	7	True	AATAAA	-12	NA	44873174	45112598	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_44873713_44873923_44873988_44961283_44961393_44974665_44974716_45010960_45011020_45020609_45020731_45034930_45034986_45037654_45037690_45051708_45051803_45053828_45053956_45059005_45059105_45059246_45059467_45060608_45060765_45061323_45061420_45062646_45062749_45063421_45063818_45069578_45070358_45076696_45076827_45078399_45078506_45079145_45079352_45082575_45082641_45082714_45082790_45083459_45083609_45085864_45085980_45089742_45089931_45090722_45090865_45107409_45107537_45110078_45110250_45111381
H1_mix_00090807	chrX	+	6164	29	FSM	ENSG00000147050.17	ENST00000675816.1	6164	29	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_26	97.625396860883	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATATTTTATATATAC	156	False	NA	112	True	NA	NA	NA	44873396	45112325	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_44873713_44873923_44873988_44961283_44961393_44974665_44974716_45010960_45011020_45020609_45020731_45034930_45034986_45037654_45037690_45051708_45051803_45053828_45053956_45059005_45059105_45059246_45059467_45060608_45060765_45061323_45061420_45062646_45062749_45063421_45063818_45069578_45070358_45076696_45076827_45078399_45078506_45079145_45079352_45082575_45082641_45082714_45082790_45083459_45083609_45085864_45085980_45089742_45089931_45090722_45090865_45106541_45107537_45110078_45110250_45111381
H1_mix_00090810	chrX	+	5009	29	NNC	ENSG00000147050.17	novel	7459	24	NA	NA	-66902	-74	intron_retention	FALSE	canonical	3	58	junction_12	77.6762232814219	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTCTATTGTTTGAGTT	14	False	NA	38	True	ATTAAA	-19	NA	44951163	45112251	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_44951196_44961283_44961393_44974665_44974716_45010960_45011020_45020609_45020731_45034930_45034986_45037654_45037690_45051708_45051803_45053828_45053956_45059005_45059105_45059246_45059467_45060021_45060157_45060608_45060765_45061323_45061420_45062646_45062749_45063421_45063818_45069578_45070358_45076696_45076827_45078399_45078506_45079145_45079352_45082575_45082641_45082714_45082790_45083459_45083609_45085864_45085980_45089742_45089931_45090722_45090865_45107409_45107537_45110078_45110250_45111381
H1_mix_00090812	chrX	+	1485	4	NNC	ENSG00000229491.5	novel	717	4	NA	NA	-19581	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	2.05480466765633	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAACTTTATTGTTTTCAT	NA	False	NA	NA	False	AATAAA	-16	NA	45300876	45333917	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_45301498_45325107_45325219_45325492_45325602_45333273
H1_mix_00090813	chrX	+	2410	6	NNC	ENSG00000147121.16	novel	2334	6	NA	NA	-54	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	28.9440840242009	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTATTTATTTATTTT	NA	False	NA	15	True	AATAAA	-16	NA	46447237	46474639	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_46447364_46448199_46448311_46450430_46450476_46462747_46462875_46463197_46463309_46472749
H1_mix_00090815	chrX	+	4713	11	FSM	ENSG00000102221.14	ENST00000611250.4	4713	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	25.0119971213816	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTGTCAGTGTGTTTTT	NA	False	NA	15	True	ATTAAA	-16	NA	46912275	47061242	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_46912341_46984883_46984941_46985712_46985793_46998119_46998278_47024723_47024915_47027891_47028104_47033620_47033789_47038948_47039066_47054157_47054629_47056081_47056200_47058166
H1_mix_00090816	chrX	+	1618	7	FSM	ENSG00000130988.13	ENST00000352078.8	1611	7	-12	5	-12	0	multi-exon	TRUE	canonical	1	1	junction_3	5.61743318211757	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTATTATGTTCCTTTT	9	True	NA	21	True	AATAAA	-15	NA	47078367	47093308	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_47078710_47081129_47081308_47084417_47084601_47089775_47089992_47091677_47091810_47092060_47092216_47092896
H1_mix_00090817	chrX	+	669	3	NNC	ENSG00000182872.16	novel	3397	24	NA	NA	0	-20154	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	116.5	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCAAGTGTGTTTTTGT	6	True	NA	NA	False	AATATA	-19	NA	47145220	47161389	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_47145486_47147356_47147499_47161127
H1_mix_00090818	chrX	+	3108	23	FSM	ENSG00000182872.16	ENST00000345781.10	3108	23	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	82.8748434051099	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGCCTCTCCTCTTTCT	15	True	NA	28	True	AATAAA	-17	NA	47145278	47186813	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_47145486_47147356_47147499_47169314_47169499_47173127_47173198_47175018_47175093_47176499_47176587_47179102_47179164_47179318_47179496_47179879_47180041_47180211_47180310_47180418_47180507_47181214_47181402_47181506_47181647_47181748_47181867_47181950_47182043_47182161_47182327_47185054_47185205_47185301_47185368_47185441_47185631_47185715_47185791_47186064_47186172_47186257_47186388_47186473
H1_mix_00090819	chrX	+	3105	23	FSM	ENSG00000182872.16	ENST00000628161.2	3105	23	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	76.6695307286327	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGCCTCTCCTCTTTCT	15	True	NA	28	True	AATAAA	-17	NA	47145278	47186813	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_47145486_47147356_47147499_47169314_47169499_47173127_47173198_47175018_47175093_47176499_47176587_47179102_47179164_47179318_47179496_47179879_47180038_47180211_47180310_47180418_47180507_47181214_47181402_47181506_47181647_47181748_47181867_47181950_47182043_47182161_47182327_47185054_47185205_47185301_47185368_47185441_47185631_47185715_47185791_47186064_47186172_47186257_47186388_47186473
H1_mix_00090829	chrX	+	2516	4	FSM	ENSG00000147117.8	ENST00000377073.4	2516	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.69967317119759	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAGTTCTGCAGCTTGC	4125	False	NA	NA	False	CATAAA	-16	NA	47370577	47414498	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_47370741_47410275_47410403_47410679_47410776_47412368
H1_mix_00090830	chrX	+	1356	6	FSM	ENSG00000078061.14	ENST00000377039.2	1271	6	-85	0	-68	0	multi-exon	FALSE	canonical	3	252	junction_4	42.0218990527558	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGAGTGTATGTGCATTA	NA	False	NA	NA	False	AATAAA	-20	NA	47561136	47565975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_47561252_47562908_47563064_47563225_47563330_47564796_47564900_47564984_47565140_47565251
H1_mix_00090831	chrX	+	488	2	FSM	ENSG00000078061.14	ENST00000469505.1	559	2	0	71	0	-71	multi-exon	FALSE	canonical	3	324	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTACAATAAATTCTCTGG	2762	False	NA	NA	False	NA	NA	NA	47569458	47570181	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_47569658_47569892
H1_mix_00090832	chrX	+	1093	4	FSM	ENSG00000102265.12	ENST00000456754.6	1095	4	0	2	0	-2	multi-exon	FALSE	canonical	3	603	junction_3	35.6495285928003	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGACCCTTCCTCAGCAC	NA	False	NA	NA	False	NA	NA	NA	47582407	47586021	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_47582475_47583407_47583537_47584935_47585016_47585204
H1_mix_00090834	chrX	+	1491	12	NIC	ENSG00000068438.15	novel	1986	14	NA	NA	-4	-2	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	117.991385033606	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTGAGTCACTTTTCT	5	True	NA	31	True	TATAAA	-43	NA	48476213	48482952	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_48476397_48476562_48476669_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482402_48482507_48482596
H1_mix_00090835	chrX	+	965	7	FSM	ENSG00000068438.15	ENST00000490202.5	965	7	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_5	62.7492806510339	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGAGTCACTTTTCTTT	2352	False	NA	33	True	TATAAA	-45	NA	48478680	48482954	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481716_48482402_48482507_48482596
H1_mix_00090837	chrX	+	1286	5	FSM	ENSG00000068438.15	ENST00000467954.5	803	5	0	-483	0	0	multi-exon	FALSE	canonical	3	160	junction_2	41.2878614122844	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAATTTTGTTTCAATTT	5097	False	NA	22	True	ATTAAA	-20	NA	48481425	48486299	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48481529_48481631_48481716_48482402_48482507_48482596_48483028_48485735
H1_mix_00090838	chrX	+	970	7	NIC	ENSG00000102312.24	novel	2079	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_2	60.9437354359649	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCACAGCCTTCGAGGC	17	True	NA	NA	False	NA	NA	NA	48509010	48512719	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_48509104_48509423_48509578_48509783_48509957_48511294_48511488_48511891_48511936_48512325_48512508_48512588
H1_mix_00090839	chrX	+	2132	12	FSM	ENSG00000102312.24	ENST00000491243.5	2112	12	-20	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	44.961324059207	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGGCTTCTTCTTCACTG	17	True	NA	16	True	AATAAA	-15	NA	48509010	48520806	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48509104_48509783_48509957_48511365_48511488_48511891_48512508_48512588_48512720_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
H1_mix_00090840	chrX	+	1693	13	FSM	ENSG00000102312.24	ENST00000361988.7	1672	13	-21	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	35.5230754424344	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGAGGGGGATGCTTGGG	25	True	NA	-54	True	NA	NA	NA	48509018	48520694	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48509104_48509783_48509957_48511294_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
H1_mix_00090841	chrX	+	2228	12	FSM	ENSG00000102312.24	ENST00000537758.6	2260	12	32	0	32	0	multi-exon	FALSE	canonical	3	138	junction_1	22.9126981287056	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAATATTCAATAGGCTTC	272	False	NA	6	True	AATAAA	-5	NA	48509265	48520796	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48509957_48511294_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
H1_mix_00090844	chrX	+	3607	5	FSM	ENSG00000068354.16	ENST00000481090.6	884	5	0	-2723	0	0	multi-exon	FALSE	canonical	3	10	junction_2	14.6522182620926	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGATGCATTCTGTGATTT	33	True	NA	11	True	AGTAAA	-15	NA	48539736	48562609	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48539921_48541332_48541443_48558896_48559025_48559157_48559347_48559613
H1_mix_00090851	chrX	+	4853	28	FSM	ENSG00000094631.21	ENST00000477528.5	4832	28	-21	0	0	0	multi-exon	TRUE	canonical	3	73	junction_1	31.7635727553406	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGCTTTTTGACTTTGAG	-32	True	NA	20	True	AATAAA	-25	NA	48802033	48824982	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48802143_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630_48806465_48806608_48806707_48808032_48808138_48808257_48808327_48814439_48814567_48814674_48814741_48814833_48814894_48814961_48815052_48815383_48815491_48815574_48815643_48815883_48816053_48816140_48816270_48816464_48816634_48817325_48817460_48818040_48818110_48818219_48818413_48820105_48820256_48822619_48822795_48822911_48823589_48823671_48823786_48823921_48824069_48824165_48824295_48824543
H1_mix_00090852	chrX	+	4156	29	FSM	ENSG00000094631.21	ENST00000644068.1	4147	29	-9	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	36.4048942661644	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGAGAAAGCTTTTTGAC	-29	True	NA	14	True	AATAAA	-19	NA	48802158	48824976	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48802273_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630_48805672_48806367_48806465_48806608_48806707_48808032_48808138_48808257_48808327_48814439_48814567_48814674_48814741_48814833_48814894_48814961_48815052_48815383_48815491_48815574_48815643_48815883_48816053_48816140_48816270_48816464_48816634_48817325_48817460_48818040_48818110_48818219_48818413_48820105_48820256_48822619_48822795_48822911_48823589_48823671_48823786_48823921_48824069_48824165_48824295_48824543
H1_mix_00090862	chrX	+	760	6	FSM	ENSG00000102103.18	ENST00000376566.8	760	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	153.683310739976	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGAGTGCTTCCTTTG	6	False	NA	24	True	AATAAA	-25	NA	48897911	48903142	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48898083_48898491_48898577_48901189_48901302_48901929_48902043_48902731_48902796_48902927
H1_mix_00090863	chrX	+	1144	4	FSM	ENSG00000102103.18	ENST00000463529.4	1144	4	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_3	33.3299998333167	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTCGGCCTCCCTGGCCC	276	False	NA	-34	True	NA	NA	NA	48898509	48903084	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48898577_48901189_48901302_48901929_48902043_48902232
H1_mix_00090864	chrX	+	1012	5	FSM	ENSG00000102103.18	ENST00000470059.5	1012	5	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_3	32.9431328200583	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTCGGCCTCCCTGGCCC	276	False	NA	-34	True	NA	NA	NA	48898509	48903084	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48898577_48901189_48901302_48901929_48902043_48902232_48902796_48902927
H1_mix_00090865	chrX	+	2406	10	FSM	ENSG00000147144.13	ENST00000496529.6	2415	10	9	0	-8	0	multi-exon	FALSE	canonical	0	0	junction_2	13.4421485642992	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGCCGGGAGGAAGGGAC	5402	False	NA	NA	False	NA	NA	NA	49058974	49068339	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_49059060_49061958_49062118_49062234_49062326_49062467_49062602_49063860_49064002_49064369_49064665_49065035_49065099_49065453_49065629_49065746_49065846_49067175
H1_mix_00090868	chrX	+	642	5	FSM	ENSG00000269313.5	ENST00000612119.1	642	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.12132034355964	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCGGCCGCCGATGGCCC	1331	False	NA	NA	False	NA	NA	NA	49163995	49166213	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_49164030_49164706_49164790_49164862_49165091_49165189_49165362_49166088
H1_mix_00090870	chrX	+	458	5	FSM	ENSG00000101951.17	ENST00000376141.5	487	5	12	17	12	-11	multi-exon	FALSE	canonical	1	2	junction_1	3.26917420765551	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTCTGAAGAAGTCATGC	12	False	NA	NA	False	AATAAA	-9	NA	49829271	49833956	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_49829297_49830398_49830507_49830996_49831085_49832524_49832651_49833845
H1_mix_00090871	chrX	+	9927	15	FSM	ENSG00000171365.17	ENST00000376091.8	9863	15	-64	0	-64	0	multi-exon	FALSE	canonical	3	11	junction_2	5.04874201344923	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGTGTCTGGTGTGTTT	NA	False	NA	16	True	AATAAA	-16	NA	49922531	50099230	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_49922793_49923406_49923483_49925170_49925315_50042315_50042463_50069878_50070031_50072488_50072589_50075794_50075983_50080593_50080717_50081640_50081848_50085979_50086061_50086327_50086871_50088697_50088885_50090115_50090515_50090669_50090887_50092128
H1_mix_00090872	chrX	+	2525	13	NIC	ENSG00000154545.17	novel	2495	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	191	junction_12	369.268157606667	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	-2	True	NA	NA	False	ATTAAA	-14	NA	52184911	52192268	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_52184966_52185891_52186133_52186396_52187231_52187641_52187846_52187948_52188013_52188205_52188286_52188673_52188766_52189386_52189467_52189551_52189595_52189985_52190049_52190993_52191109_52191430_52191874_52192056
H1_mix_00090873	chrX	+	545	4	FSM	ENSG00000179304.18	ENST00000610609.4	545	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	71.1305528978621	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGAAACGGAATCCAGCAT	5340	False	NA	NA	False	NA	NA	NA	52896940	52907236	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_52897191_52899467_52899542_52900567_52900661_52907108
H1_mix_00090874	chrX	+	4651	1	NIC	ENSG00000184194.6	novel	4787	2	NA	NA	26682	0	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTGTTTCTTTTTTCA	3612	False	NA	NA	False	TATAAA	-1	NA	53075964	53080615	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_53076000_53080600
H1_mix_00090875	chrX	+	966	6	FSM	ENSG00000184205.14	ENST00000578306.5	966	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	84.6366350937938	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACAATGAGGTCCCCAAC	89	False	NA	NA	False	NA	NA	NA	53082992	53085839	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_53083306_53084531_53084623_53084754_53084867_53084953_53085100_53085226_53085322_53085630
H1_mix_00090876	chrX	+	2865	7	NIC	ENSG00000184205.14	novel	2815	7	NA	NA	-38	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_1	80.2089285692199	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGCCGCTTCGAGTCTT	1184	False	NA	15	True	AATAAA	-16	NA	53082328	53088539	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_53083306_53084531_53084623_53084754_53084867_53084953_53085100_53085226_53085322_53085630_53086311_53087775
H1_mix_00090877	chrX	+	722	4	FSM	ENSG00000184205.14	ENST00000463525.1	722	4	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_2	11.6141675934562	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCTGAAGACAATAACAAGAA	1795	False	NA	NA	False	NA	NA	NA	53084698	53085943	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_53084867_53084953_53085100_53085226_53085322_53085630
H1_mix_00090879	chrX	+	735	5	FSM	ENSG00000158423.17	ENST00000457095.5	1949	5	13	1201	13	0	multi-exon	FALSE	canonical	2	3	junction_4	3.69966214673719	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCAGCCCGGCCCTCCA	-2	True	NA	NA	False	NA	NA	NA	53422902	53428627	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_53423005_53423313_53423403_53426276_53426394_53428002_53428085_53428282
H1_mix_00090880	chrX	+	527	1	FSM	ENSG00000234566.1	ENST00000451120.1	739	1	251	-39	251	39	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCACTTTGGGAGGCTGA	NA	False	NA	NA	False	NA	NA	NA	54223574	54224101	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_54223600_54224100
H1_mix_00090881	chrX	+	2319	16	FSM	ENSG00000130119.17	ENST00000674225.1	2324	16	5	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	13.3159887186628	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCTAGCCTGGGCAACAA	-41	True	NA	NA	False	NA	NA	NA	54530208	54561035	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_54530303_54532523_54532586_54539039_54539102_54540134_54540243_54541272_54541390_54542954_54543039_54543206_54543343_54544222_54544327_54548228_54548374_54550962_54551051_54551567_54551743_54551831_54551975_54552291_54552429_54554564_54554693_54558435_54558656_54560519
H1_mix_00090882	chrX	+	7657	17	NNC	ENSG00000130119.17	novel	2357	16	NA	NA	0	627	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	13.2781246322664	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAATCCTGCATTCCTGT	-41	True	NA	NA	False	AATAAA	-27	NA	54530208	54567916	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_54530303_54532519_54532586_54539039_54539102_54540134_54540243_54541272_54541390_54542954_54543039_54543206_54543343_54544222_54544327_54548228_54548374_54550962_54551051_54551567_54551743_54551831_54551975_54552291_54552429_54554564_54554693_54558435_54558656_54560519_54560755_54562301
H1_mix_00090886	chrX	+	2617	14	FSM	ENSG00000067445.22	ENST00000445561.5	2597	14	-20	0	0	0	multi-exon	TRUE	canonical	0	0	junction_12	128.650896827181	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTTTTTTCTGTCTTT	233	False	NA	NA	False	ATTAAA	-14	NA	54920795	54931431	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_54920879_54922217_54922292_54922577_54923769_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602_54928711_54930740_54931032_54931203
H1_mix_00090889	chrX	+	4599	13	NIC	ENSG00000067445.22	novel	2597	14	NA	NA	-11	-2	intron_retention	FALSE	canonical	3	393	junction_1	40.1506710888982	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTGGAGTTTTTTCTGT	16	False	NA	NA	False	ATTAAA	-10	NA	54920839	54931427	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_54920879_54922217_54922292_54922577_54923769_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602_54931032_54931203
H1_mix_00090893	chrX	+	644	7	FSM	ENSG00000083750.13	ENST00000414239.5	644	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	25.6298437156548	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGATGAAGTACTTCTTTT	-13	True	NA	NA	False	AATGAA	-29	NA	55717748	55753475	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_55717789_55719313_55719348_55722185_55722286_55729293_55729361_55731363_55731587_55751100_55751197_55753391
H1_mix_00090895	chrX	+	975	3	FSM	ENSG00000227486.3	ENST00000669152.1	956	3	-19	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATAATAGCAATAATAAAG	NA	False	NA	NA	False	NA	NA	NA	55908223	56205253	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_55908801_56014844_56014962_56204972
H1_mix_00090896	chrX	+	5720	3	ISM	ENSG00000102349.18	ENST00000462627.5	8964	5	34999	9	34261	-9	3prime_fragment	FALSE	canonical	3	41	junction_1	13.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAATATTATTAACTGAAG	NA	False	NA	8	True	AATAAA	-13	NA	56267472	56287875	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_56269490_56270181_56270322_56284312
H1_mix_00090898	chrX	+	594	2	FSM	ENSG00000226310.2	ENST00000439622.2	1824	2	116	1114	116	-1114	multi-exon	FALSE	canonical	0	0	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCAGGAAATGGGACCTT	-16	True	NA	NA	False	AATACA	-33	NA	57121732	57127243	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_57121968_57126884
H1_mix_00090899	chrX	+	4793	2	NNC	ENSG00000286977.1	novel	1984	2	NA	NA	-2842	3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTCCACACTGCCTCGT	NA	False	NA	-7	True	ATTAAA	-8	NA	57219863	57224794	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_57224300_57224437
H1_mix_00090900	chrX	+	635	1	FSM	ENSG00000236852.1	ENST00000455793.1	1077	1	311	131	311	-131	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGAAATTTGCTAGTGATG	NA	False	NA	NA	False	GATAAA	-27	NA	62779560	62780195	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_62779600_62780200
H1_mix_00090901	chrX	+	6677	3	ISM	ENSG00000102053.12	ENST00000338957.4	7256	5	10000	28	10000	-28	3prime_fragment	FALSE	canonical	3	5	junction_2	3.5	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCATAAACTATTTGTGT	9872	False	NA	-19	True	AATGAA	-19	NA	65498734	65507859	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_65499234_65499882_65499990_65501788
H1_mix_00090904	chrX	+	4310	21	FSM	ENSG00000089472.18	ENST00000441993.7	4310	21	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_20	44.6470603735565	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAAGACTGAATTTGGTG	-6	True	NA	21	True	ATTAAA	-16	NA	66164358	66267383	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_66164471_66170557_66170738_66172354_66172600_66173588_66173802_66188358_66188542_66189683_66189939_66192129_66192299_66193501_66193639_66195097_66195230_66197682_66197895_66198877_66199029_66200539_66200753_66203363_66203578_66207194_66207335_66208114_66208247_66255034_66255142_66256104_66256331_66258839_66258980_66260099_66260263_66263643_66263689_66266442
H1_mix_00090905	chrX	+	4228	20	FSM	ENSG00000089472.18	ENST00000684071.1	4854	20	626	0	626	0	multi-exon	FALSE	canonical	3	174	junction_4	27.5093537353441	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGACTGAATTTGGTGAT	632	False	NA	23	True	ATTAAA	-18	NA	66170532	66267385	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_66170738_66172354_66172600_66173588_66173802_66188358_66188542_66189683_66189939_66192129_66192299_66193501_66193639_66195097_66195230_66197682_66197895_66198877_66199029_66200539_66200753_66203363_66203578_66207194_66207335_66208114_66208247_66255034_66255142_66256104_66256331_66258839_66258980_66260099_66260263_66263643_66263689_66266439
H1_mix_00090906	chrX	+	714	4	FSM	ENSG00000089472.18	ENST00000471121.1	802	4	88	0	88	0	multi-exon	FALSE	canonical	3	206	junction_1	17.9071680247511	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGTGAAAGAACAAAGGACA	NA	False	NA	NA	False	NA	NA	NA	66200539	66208261	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_66200753_66203363_66203578_66207194_66207335_66208114
H1_mix_00090907	chrX	+	7839	6	ISM	ENSG00000169083.18	ENST00000612452.5	7630	9	141994	-71	139308	71	intron_retention	FALSE	canonical	1	1	junction_2	2.78567765543682	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGCCCGGTTGCGTTTTA	NA	False	NA	83	True	NA	NA	NA	67686014	67730690	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_67686127_67711401_67711690_67717477_67717623_67721832_67721964_67722826_67722985_67723685
H1_mix_00090910	chrX	+	2527	1	FSM	ENSG00000285776.1	ENST00000647846.1	119	1	-2295	-113	-2295	113	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTCTACTAAAAATTCAAAAA	NA	False	NA	NA	False	NA	NA	NA	69670183	69672710	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_69670200_69672700
H1_mix_00090911	chrX	+	4604	30	NIC	ENSG00000090889.12	novel	4388	31	NA	NA	3	-60	intron_retention	FALSE	canonical	3	171	junction_11	26.0038870230809	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTGGGAAGATCCTTCT	16	True	NA	30	True	AATAAA	-15	NA	70290114	70420826	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_70290579_70290690_70290806_70296997_70297189_70299112_70299203_70301899_70302067_70302303_70302399_70329404_70329522_70330156_70330333_70333627_70333690_70341798_70341932_70343702_70343762_70343876_70343983_70352599_70352657_70353621_70353808_70374150_70374255_70375203_70375349_70376099_70376211_70386617_70386702_70387183_70387298_70395670_70395827_70395948_70396050_70402565_70402696_70403863_70404035_70404714_70404823_70405827_70405906_70406258_70406355_70406892_70407076_70417887_70418005_70419660_70419784_70420061
H1_mix_00090913	chrX	+	6903	46	FSM	ENSG00000184634.17	ENST00000690242.1	6912	46	9	0	-4	0	multi-exon	TRUE	canonical	3	29	junction_41	27.9066344605289	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGTGTGCGAGTTCTGCA	8	True	NA	24	True	AATACA	-18	NA	71118551	71142450	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71118854_71119372_71119478_71119685_71119878_71120013_71120171_71120970_71121153_71121326_71121438_71121561_71121817_71122199_71122347_71122507_71122608_71122737_71122875_71123094_71123227_71123593_71123721_71124158_71124389_71124763_71124845_71124975_71125147_71125350_71125496_71125662_71125714_71126035_71126155_71126340_71126485_71126968_71127133_71127335_71127468_71127892_71128121_71128295_71128441_71128597_71128719_71129113_71129216_71129315_71129430_71129679_71129856_71130034_71130215_71131549_71131622_71132072_71132207_71132376_71132539_71132844_71132957_71133122_71133213_71134356_71134467_71134712_71134849_71135091_71135254_71136280_71136656_71136878_71137030_71137186_71137393_71137557_71137636_71137725_71137781_71137855_71137944_71140634_71140858_71141229_71141371_71141882_71141965_71142174
H1_mix_00090915	chrX	+	3861	6	FSM	ENSG00000196338.15	ENST00000536169.6	3812	6	-12	-37	-10	-2	multi-exon	FALSE	canonical	2	5	junction_2	40.0829140657213	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACCTGCCTCCCTTGCAC	-14	True	NA	8	True	AATAAA	-18	NA	71144830	71171197	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71144965_71147549_71148207_71155213_71155364_71164142_71164329_71167010_71167801_71169253
H1_mix_00090917	chrX	+	2879	13	FSM	ENSG00000147140.17	ENST00000677446.1	2868	13	-48	37	-48	0	multi-exon	FALSE	canonical	3	14	junction_1	722.764268278392	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCATCAACCTATTAAAATA	NA	False	NA	-5	True	NA	NA	NA	71254765	71301131	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71255001_71283614_71283722_71284396_71284454_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71297939_71298468_71298509_71298706_71298817_71299941
H1_mix_00090918	chrX	+	3932	6	FSM	ENSG00000147140.17	ENST00000471419.7	3932	6	0	0	0	0	multi-exon	FALSE	canonical	3	2046	junction_2	185.842298737397	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTTTTTTTGGAGACA	30	True	NA	NA	False	NA	NA	NA	71283662	71298924	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71283722_71284396_71284454_71290628_71291973_71294226_71294529_71296564_71296661_71296850
H1_mix_00090921	chrX	+	5388	21	NIC	ENSG00000147162.14	novel	5435	22	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_3	77.9995352550257	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGCTGATGTATTTTGTA	6	True	NA	19	True	AATAAA	-19	NA	71533081	71575892	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_71533337_71536177_71536359_71537828_71538073_71547906_71548024_71554512_71554593_71555189_71555386_71555953_71556095_71556679_71556781_71556951_71557106_71557194_71557297_71557492_71557673_71559266_71559426_71559587_71559678_71561774_71561901_71562846_71563018_71563129_71563247_71563328_71563500_71564600_71564754_71567499_71567753_71567992_71568117_71573619
H1_mix_00090924	chrX	+	2742	3	NNC	ENSG00000204131.10	novel	13633	8	NA	NA	-6	-673	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_2	3	127	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTCTCACTTCTCCCAC	-4	True	NA	NA	False	NA	NA	NA	71910838	72140584	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_71911368_72009345_72009415_72138440
H1_mix_00090925	chrX	+	2259	3	FSM	ENSG00000102309.15	ENST00000446576.2	776	3	-494	-989	-53	0	multi-exon	FALSE	canonical	1	9	junction_1	532.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGATTCTTAACAGATTA	NA	False	NA	NA	False	AATAAA	-18	NA	72181299	72198343	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_72181926_72186460_72186535_72196784
H1_mix_00090927	chrX	+	889	3	FSM	ENSG00000225470.8	ENST00000666493.1	882	3	-7	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	121.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATCTTTGAATAACATTT	397	False	NA	NA	False	AATAAA	-16	NA	73944310	73947704	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_73944415_73944583_73944663_73946998
H1_mix_00090929	chrX	+	5350	5	FSM	ENSG00000225470.8	ENST00000667886.1	5350	5	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_3	173.453884361233	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATACAGAAAATTAGCCA	397	False	NA	NA	False	NA	NA	NA	73944310	74007534	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_73944466_73944583_73944663_73994839_73994962_73998767_74000497_74004269
H1_mix_00090932	chrX	+	2491	7	NIC	ENSG00000225470.8	novel	5531	7	NA	NA	4	-50	intron_retention	FALSE	canonical	2	9	junction_3	171.629122107979	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAACTCATACATTTCCAT	10	True	NA	-84	True	CATAAA	-38	NA	73944354	74004452	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_73944466_73944583_73944663_73946998_73947375_73994839_73994962_73998767_73998845_73998953_74000497_74004269
H1_mix_00090936	chrX	+	2237	8	NIC	ENSG00000094841.14	novel	1135	8	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_7	67.6183769249099	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTAGCTGATTACTTGA	46	False	NA	12	True	ATTAAA	-15	NA	75274144	75304600	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_75274641_75293471_75293515_75294562_75294621_75296341_75296412_75297490_75297554_75299734_75299897_75300866_75301016_75303404
H1_mix_00090938	chrX	+	741	2	FSM	ENSG00000289132.1	ENST00000685301.1	848	2	74	33	13	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTTGGAACAATTAGAA	16	False	NA	NA	False	AATAAA	-20	NA	80810164	80812770	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_80810246_80812110
H1_mix_00090939	chrX	+	693	1	FSM	ENSG00000073905.8	ENST00000439229.2	848	1	180	-25	180	25	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAACTATTTTGCAGCA	NA	False	NA	NA	False	CATAAA	-23	NA	80929679	80930372	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_80929700_80930400
H1_mix_00090940	chrX	+	4559	11	FSM	ENSG00000147180.17	ENST00000674551.1	4559	11	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	64.5941947855997	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATGGTTTTATAAGTTT	0	True	NA	13	True	AATAAA	-15	NA	85243990	85273357	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_85244192_85245902_85246023_85246929_85247189_85247546_85247652_85255258_85255802_85264274_85264431_85265117_85265256_85267277_85267416_85268293_85268342_85270002_85270147_85270650
H1_mix_00090941	chrX	+	4329	11	NNC	ENSG00000147180.17	novel	4559	11	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	64.2439880455751	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATGGTTTTATAAGTTT	12	True	NA	13	True	AATAAA	-15	NA	85244104	85273357	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_85244192_85245902_85246023_85246929_85247073_85247546_85247652_85255258_85255802_85264274_85264431_85265117_85265256_85267277_85267416_85268293_85268342_85270002_85270147_85270650
H1_mix_00090942	chrX	+	5569	8	NIC	ENSG00000147180.17	novel	4559	11	NA	NA	24	0	intron_retention	FALSE	canonical	3	119	junction_5	25.3514078021521	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATGGTTTTATAAGTTT	15	True	NA	13	True	AATAAA	-15	NA	85244107	85273357	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_85244192_85245902_85247652_85255258_85255802_85264274_85264431_85265117_85265256_85268293_85268342_85270002_85270147_85270650
H1_mix_00090943	chrX	+	4520	8	ISM	ENSG00000147180.17	ENST00000373165.7	4124	9	105	3	53	0	intron_retention	FALSE	canonical	3	97	junction_2	34.2613008318989	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATGGTTTTATAAGTTT	21	False	NA	13	True	AATAAA	-15	NA	85244136	85273357	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_85244192_85245902_85246023_85247546_85247652_85255258_85255802_85264274_85264431_85265117_85265256_85268293_85268342_85270002
H1_mix_00090944	chrX	+	3269	10	NIC	ENSG00000102271.14	novel	5765	11	NA	NA	192	-1666	combination_of_known_splicesites	FALSE	canonical	3	9	junction_9	37.3128250549358	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTATAGTGTGGCTTTAG	5	True	NA	2	True	AATAAA	-13	NA	87518005	87667930	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_87518316_87613876_87614045_87614433_87614571_87617931_87618129_87622210_87622424_87625609_87625797_87632209_87632435_87633748_87633912_87635562_87635776_87666474
H1_mix_00090945	chrX	+	301	2	Intergenic	novelGene_1677	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	33	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGTGTAAATGGCCAGT	NA	False	NA	NA	False	NA	NA	NA	87682124	87687334	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_87682278_87687186
H1_mix_00090946	chrX	+	1306	1	FSM	ENSG00000215089.3	ENST00000435214.1	1283	1	46	-69	46	69	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATTTAAACAATGAAAACTA	106	False	NA	NA	False	AATAAA	-25	NA	92459715	92461021	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_92459700_92461000
H1_mix_00090948	chrX	+	390	3	Intergenic	novelGene_1689	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGATGGCTTGGCTTGGG	NA	False	NA	NA	False	NA	NA	NA	94698845	94705054	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_94698967_94704323_94704443_94704904
H1_mix_00090950	chrX	+	360	4	Intergenic	novelGene_1691	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	3.2659863237109	163	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACGGATTTTATTGTGCT	NA	False	NA	NA	False	NA	NA	NA	94701118	94747255	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_94701209_94702050_94702167_94746874_94746971_94747197
H1_mix_00090951	chrX	+	337	1	FSM	ENSG00000223467.2	ENST00000442082.2	433	1	180	-84	180	84	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAAAGTTCATTTATTT	6368	False	NA	NA	False	TATAAA	-14	NA	95499783	95500120	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_95499800_95500100
H1_mix_00090952	chrX	+	1628	1	FSM	ENSG00000204086.4	ENST00000373040.4	1560	1	-97	29	-97	-29	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGCGAAAAGACAAAAAAAAA	13	False	NA	NA	False	AAGAAA	-23	NA	96883810	96885438	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_96883800_96885400
H1_mix_00090953	chrX	+	1860	5	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625737	-4397	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_4	273.278246481494	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAACTTGTCTGTCTATTA	NA	False	NA	12	True	AATAAA	-20	NA	97310578	97600600	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_97310659_97348080_97348281_97383908_97384045_97429649_97429746_97599252
H1_mix_00090954	chrX	+	208	1	Intergenic	novelGene_1696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGCAAGAAATGACTGAGG	793	False	NA	NA	False	NA	NA	NA	98525439	98525647	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_98525400_98525600
H1_mix_00090955	chrX	+	957	6	NIC	ENSG00000281566.3	novel	1309	6	NA	NA	17	11633	combination_of_known_splicesites	FALSE	canonical	1	4	junction_4	21.2414688757628	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCAGTAGATGTTACTTT	19	False	NA	NA	False	ATTAAA	-41	NA	98573891	98877197	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_98573933_98578985_98579075_98644527_98644575_98731530_98731578_98841940_98842002_98876525
H1_mix_00090956	chrX	+	558	3	FSM	ENSG00000000005.6	ENST00000485971.1	542	3	-16	0	-16	0	multi-exon	FALSE	canonical	3	12	junction_1	3	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTCAGTGATTTGGGTC	248	False	NA	NA	False	AAGAAA	-19	NA	100593607	100597531	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_100594036_100594260_100594363_100597503
H1_mix_00090957	chrX	+	576	3	FSM	ENSG00000102384.14	ENST00000682304.1	560	3	-16	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	9	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGTAAAACAGGATCCAA	-4	True	NA	NA	False	NA	NA	NA	101098187	101101159	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_101098540_101099808_101099931_101101057
H1_mix_00090958	chrX	+	2868	21	FSM	ENSG00000102384.14	ENST00000423383.3	2867	21	-1	0	0	0	multi-exon	FALSE	canonical	1	1	junction_20	14.3041951888248	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCCTAAGTAGTTGGT	-4	True	NA	NA	False	NA	NA	NA	101098187	101163436	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_101098249_101098443_101098540_101101057_101101297_101102273_101102412_101109472_101109592_101109890_101109999_101120401_101120451_101120737_101120785_101126708_101126799_101127137_101127267_101127497_101127666_101128715_101128837_101129981_101130074_101132189_101132308_101132391_101132457_101140665_101140761_101145063_101145200_101146152_101146278_101147762_101147812_101147942_101148162_101162832
H1_mix_00090960	chrX	+	433	6	FSM	ENSG00000241343.10	ENST00000372849.8	433	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	3662.7013200642	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTTCACTTCATTTGTT	23	True	NA	16	True	AATAAA	-10	NA	101391015	101395786	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_101391047_101391458_101391565_101391754_101391823_101392049_101392096_101395334_101395458_101395727
H1_mix_00090962	chrX	+	3913	4	NIC	ENSG00000102401.20	novel	3318	5	NA	NA	-6	0	intron_retention	FALSE	canonical	3	166	junction_3	10.6144555520604	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTACTGTGTAAAGTTCTA	3	False	NA	25	True	AATAAA	-35	NA	101623120	101627841	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_101623894_101624157_101624219_101624479_101624551_101624833
H1_mix_00090964	chrX	+	809	1	FSM	ENSG00000261101.2	ENST00000564612.2	656	1	102	-255	102	255	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTGCTCCTTTCCCCAT	810	False	NA	NA	False	AGTAAA	-37	NA	101627969	101628778	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_101628000_101628800
H1_mix_00090965	chrX	+	2777	4	FSM	ENSG00000125962.16	ENST00000473968.7	2772	4	-5	0	-5	0	multi-exon	FALSE	canonical	3	37	junction_1	33.1595469745224	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCCTAGTTCTTCAGC	-18	True	NA	26	True	AATAAA	-25	NA	102599509	102604159	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_102599848_102600919_102601033_102601463_102601510_102601879
H1_mix_00090969	chrX	+	2504	4	ISM	ENSG00000271147.8	ENST00000460026.6	645	6	12	35379	0	-1733	5prime_fragment	FALSE	canonical	3	19	junction_1	39.0924829375447	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCCTAGTTCTTCAGC	9	True	NA	26	True	AATAAA	-25	NA	102599536	102604159	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_102599573_102599705_102599848_102601463_102601510_102601879
H1_mix_00090974	chrX	+	5765	3	FSM	ENSG00000198932.13	ENST00000444152.5	5809	3	13	31	13	-25	multi-exon	TRUE	canonical	0	0	junction_1	5.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTTGAAAAATAAATGTGA	NA	False	NA	NA	False	AATAGA	-34	NA	102651378	102659049	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_102651596_102653220_102653299_102653579
H1_mix_00090975	chrX	+	3767	4	FSM	ENSG00000158301.20	ENST00000332262.10	3451	4	-315	-1	-315	1	multi-exon	FALSE	canonical	0	0	junction_1	35.7055862420559	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGACCCTTCTTCAGTTT	99	False	NA	19	True	AATAAA	-22	NA	102712129	102717734	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_102712553_102713781_102713850_102714188_102714267_102714536
H1_mix_00090976	chrX	+	5578	8	NIC	ENSG00000286237.1	novel	5582	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	33.818241666115	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCACTTATTTAAGTCTC	9	False	NA	-8	True	AATAAA	-6	NA	102712494	102753530	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_102712553_102713129_102713218_102713781_102713850_102714188_102714267_102720533_102720822_102720956_102721028_102747816_102747912_102748698
H1_mix_00090977	chrX	+	5582	8	FSM	ENSG00000286237.1	ENST00000652409.1	5582	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	35.2773269383944	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCACTTATTTAAGTCTC	9	False	NA	-8	True	AATAAA	-6	NA	102712494	102753530	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_102712553_102713129_102713218_102713781_102713850_102714188_102714267_102720533_102720826_102720956_102721028_102747816_102747912_102748698
H1_mix_00090979	chrX	+	3936	2	FSM	ENSG00000198908.12	ENST00000448867.1	3936	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTTTGAATCACTTAAT	1	True	NA	19	True	AATAAA	-15	NA	102745978	102752438	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_102746175_102748698
H1_mix_00090980	chrX	+	2122	8	FSM	ENSG00000223546.8	ENST00000440496.5	2101	8	-21	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	9.96729345286423	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAATAAGTCTTTTTGTG	-23	True	NA	NA	False	AATAAA	-16	NA	102769157	102885406	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_102769342_102770351_102770421_102816991_102817083_102826968_102827145_102839800_102839864_102845856_102846021_102865041_102865153_102884142
H1_mix_00090983	chrX	+	2603	10	NNC	ENSG00000223546.8	novel	2101	8	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	12.4642699221157	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGAATAAGTCTTTTTG	40	False	NA	NA	False	AATAAA	-14	NA	102769220	102885404	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_102769342_102770351_102770421_102816991_102817083_102825992_102826170_102826968_102827145_102829887_102830148_102839800_102839973_102845856_102846021_102865041_102865153_102884142
H1_mix_00090985	chrX	+	1938	1	FSM	ENSG00000185222.10	ENST00000646896.1	1938	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAGCAACAAGCAGCA	19	True	NA	-1	True	AATAAA	-11	NA	103356517	103358455	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103356500_103358500
H1_mix_00090986	chrX	+	451	3	NNC	ENSG00000281091.3	novel	2720	3	NA	NA	4	-3460	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	4	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGATTGATTCCCAGCTT	14	True	NA	NA	False	AAAAAG	-9	NA	103404808	103449294	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_103405097_103408157_103408300_103449273
H1_mix_00090988	chrX	+	2297	1	FSM	ENSG00000279894.1	ENST00000623412.1	2297	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGGTTGTATCAGTTTA	9533	False	NA	NA	False	AATATA	-16	NA	103596607	103598904	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103596600_103598900
H1_mix_00090989	chrX	+	1210	3	FSM	ENSG00000172465.14	ENST00000372626.7	721	3	15	-504	15	-2	multi-exon	FALSE	canonical	3	3	junction_1	5.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGAATCCTATGTTTTTT	-4	True	NA	NA	False	AATAAA	-22	NA	103628718	103630951	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103628794_103629493_103629562_103629884
H1_mix_00090993	chrX	+	3022	6	NIC	ENSG00000123575.9	novel	7624	6	NA	NA	13	-4	combination_of_known_junctions	FALSE	canonical	3	8	junction_5	59.8578315678074	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATTGGAGTAGTCTTTCT	17	False	NA	23	True	AATAAA	-20	NA	104166465	104191442	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_104166983_104175622_104175843_104186065_104186216_104186459_104186622_104188039_104188178_104189607
H1_mix_00090994	chrX	+	1289	5	FSM	ENSG00000189108.13	ENST00000344799.5	1290	5	1	0	1	0	multi-exon	FALSE	canonical	2	3	junction_2	0.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAATCTGAATTCCTCT	NA	False	NA	NA	False	NA	NA	NA	105717366	105767661	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_105717497_105740545_105740692_105748959_105749104_105755176_105755348_105766963
H1_mix_00090995	chrX	+	3602	13	FSM	ENSG00000147231.14	ENST00000372544.6	3607	13	5	0	5	0	multi-exon	FALSE	canonical	2	3	junction_8	9.14201229975594	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAACTTTTTGGTCTCCTG	-27	True	NA	4	True	ATTAAA	-14	NA	106611934	106679437	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_106612724_106622650_106622794_106625089_106625283_106632624_106632734_106632931_106633024_106633129_106633253_106636542_106636648_106637759_106637795_106640551_106640722_106648312_106648387_106662014_106662306_106669162_106669331_106678127
H1_mix_00090996	chrX	+	2576	12	FSM	ENSG00000133138.20	ENST00000310452.6	2589	12	13	0	-3	0	multi-exon	FALSE	canonical	1	2	junction_11	4.23093682844367	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGAATTGTGTTTCTGA	-13	True	NA	NA	False	AATAAA	-26	NA	106802701	106849831	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_106802984_106818662_106818774_106820876_106820996_106821976_106822203_106823225_106823467_106826029_106826238_106827169_106827338_106839307_106839458_106840047_106840199_106840669_106840885_106848185_106848304_106849244
H1_mix_00090997	chrX	+	5729	21	FSM	ENSG00000133138.20	ENST00000357242.10	5729	21	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_11	4.21040378111174	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTTTACTTAAAAAGATTA	-42	True	NA	NA	False	AATAAA	-23	NA	106802672	106876150	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_106802984_106818662_106818774_106820876_106820996_106821976_106822203_106823225_106823467_106826029_106826238_106827169_106827338_106839307_106839458_106840047_106840199_106840669_106840885_106848185_106848304_106850024_106850311_106853520_106853651_106854197_106854297_106865558_106865628_106865792_106866034_106866796_106866863_106868392_106868477_106869484_106869542_106870715_106870814_106873569
H1_mix_00090998	chrX	+	444	2	FSM	ENSG00000147224.13	ENST00000646815.1	444	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGACTTTGTGATTGGCAA	6	True	NA	NA	False	AATAAA	-16	NA	107628509	107630219	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_107628751_107630016
H1_mix_00090999	chrX	+	2006	12	FSM	ENSG00000101844.18	ENST00000345734.7	2129	12	60	63	-41	-63	multi-exon	TRUE	canonical	1	1	junction_8	7.69028581183876	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTAAATTGTTGATTTT	53	False	NA	-49	True	NA	NA	NA	108091727	108154608	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_108091837_108126076_108126188_108128780_108128853_108131259_108131359_108134056_108134159_108134338_108134412_108137090_108137171_108137803_108137885_108150151_108150298_108151801_108151859_108152978_108153088_108153641
H1_mix_00091000	chrX	+	597	4	FSM	ENSG00000101844.18	ENST00000489247.1	623	4	26	0	26	0	multi-exon	FALSE	canonical	3	19	junction_2	1.24721912892465	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	108150093	108153868	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_108150298_108151801_108151859_108152978_108153088_108153641
H1_mix_00091001	chrX	+	4216	42	NNC	ENSG00000188153.14	novel	6427	51	NA	NA	-46	-16728	at_least_one_novel_splicesite	TRUE	canonical	1	3	junction_41	33.9167192244566	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCATGACTGTAATCCCA	-27	True	NA	NA	False	NA	NA	NA	108439791	108670772	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_108440207_108539745_108539806_108559063_108559154_108563881_108563927_108568628_108568674_108568758_108568822_108571412_108571467_108571810_108571838_108573573_108573655_108575909_108575973_108577951_108577988_108578077_108578120_108578290_108578384_108580532_108580587_108580681_108580739_108580982_108581028_108582883_108582938_108584483_108584526_108586614_108586748_108591057_108591232_108591560_108591645_108595508_108595602_108596997_108597069_108597376_108597569_108598701_108598871_108601392_108601486_108601884_108601990_108602963_108603062_108606741_108606893_108614910_108615025_108620258_108620427_108621802_108621893_108622675_108622826_108624235_108624335_108625704_108625795_108626209_108626350_108655330_108655458_108665506_108665588_108666495_108666595_108667132_108667184_108668318_108668505_108670680
H1_mix_00091004	chrX	+	1608	3	FSM	ENSG00000237863.3	ENST00000668534.1	1608	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	1	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATTCCACTATTCTTTTT	2487	False	NA	NA	False	TTTAAA	-26	NA	108736090	108739223	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_108736367_108737386_108737924_108738428
H1_mix_00091005	chrX	+	1984	3	FSM	ENSG00000237863.3	ENST00000436013.2	1489	3	-28	-467	0	467	multi-exon	FALSE	canonical	2	4	junction_1	4	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAAACTTTGTGGTATTT	2881	False	NA	-6	True	AATAAA	-4	NA	108736484	108739690	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_108736592_108737264_108737880_108738428
H1_mix_00091006	chrX	+	2670	5	FSM	ENSG00000101888.12	ENST00000218004.5	2692	5	22	0	22	0	multi-exon	FALSE	canonical	2	9	junction_1	58.349700084919	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGATTTTCTCAAGATTGT	-13	True	NA	13	True	AATAAA	-14	NA	109535802	109544684	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_109535978_109536936_109537022_109538044_109538132_109541474_109541620_109542506
H1_mix_00091007	chrX	+	3838	26	NIC	ENSG00000101901.12	novel	4113	27	NA	NA	1	0	intron_retention	FALSE	canonical	3	8	junction_23	14.6230502973901	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTGGGATTTTTTCTTTT	7	True	NA	20	True	AATAAA	-25	NA	111681207	111760649	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_111681300_111682131_111682295_111684964_111685104_111708026_111708394_111708964_111709049_111711674_111711726_111712483_111712531_111713224_111713298_111717845_111717928_111718111_111718275_111720094_111720171_111721602_111721712_111722792_111722858_111723797_111723899_111724933_111725062_111726808_111727056_111727331_111727446_111727613_111727771_111728184_111728306_111730394_111730428_111730524_111730581_111735050_111735123_111736713_111736880_111752789_111752831_111757587_111757763_111759733
H1_mix_00091009	chrX	+	627	1	Intergenic	novelGene_1706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAAAGTACAATTTTGTG	NA	False	NA	36	True	AATAAA	-39	NA	114057589	114058216	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_114057600_114058200
H1_mix_00091010	chrX	+	698	1	FSM	ENSG00000224664.2	ENST00000432891.2	316	1	-295	-87	-295	87	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTGATCCCATTTGCCA	5197	False	NA	NA	False	NA	NA	NA	114589324	114590022	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_114589300_114590000
H1_mix_00091011	chrX	+	567	1	FSM	ENSG00000234785.1	ENST00000434365.1	1310	1	769	-26	769	26	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACCTGCCCTTCAGGGAG	785	False	NA	NA	False	NA	NA	NA	115703579	115704146	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_115703600_115704100
H1_mix_00091012	chrX	+	3644	3	NNC	ENSG00000229335.2	novel	444	3	NA	NA	0	-9292	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	38	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCTCAGATATTTTGTG	65	False	NA	11	True	AATGAA	-20	NA	115840963	115897286	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_115841079_115842839_115843182_115894099
H1_mix_00091013	chrX	+	1762	2	FSM	ENSG00000101856.10	ENST00000535419.2	1762	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTGTGGTGACTTATTTA	7277	False	NA	15	True	AATAAA	-17	NA	119236244	119244465	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_119236692_119243150
H1_mix_00091015	chrX	+	1853	2	FSM	ENSG00000005022.6	ENST00000463551.1	433	2	-1076	-344	-91	29	multi-exon	FALSE	canonical	3	5365	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCGGAGATGAAGAACTGT	742	False	NA	-3	True	AATAAA	-12	NA	119469185	119471425	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_119470514_119470900
H1_mix_00091022	chrX	+	7211	33	NIC	ENSG00000101972.20	novel	5218	35	NA	NA	-785	2	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	68.159903615964	6557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTATGTTTTCTCTTGT	NA	False	NA	14	True	AATAAA	-16	NA	123959426	124102499	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_123960943_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568_124042646_124045163_124045369_124047353_124047506_124049004_124049079_124050185_124050310_124051120_124051220_124051314_124051395_124056127_124056236_124057865_124057978_124061223_124061342_124061770_124061875_124062901_124062995_124063115_124063206_124063847_124064052_124065875_124065947_124066174_124066263_124066355_124066437_124068563_124068657_124071148_124071324_124076331_124076472_124077956_124078059_124081379_124081529_124083420_124083550_124086546_124086771_124090574_124090765_124094017_124094145_124095371_124095450_124100573
H1_mix_00091023	chrX	+	7200	34	NIC	ENSG00000101972.20	novel	5218	35	NA	NA	-785	2	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	76.4643275549439	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTATGTTTTCTCTTGT	NA	False	NA	14	True	AATAAA	-16	NA	123959426	124102499	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_123960867_124021366_124021432_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568_124042646_124045163_124045369_124047353_124047506_124049004_124049079_124050185_124050310_124051120_124051220_124051314_124051395_124056127_124056236_124057865_124057978_124061223_124061342_124061770_124061875_124062901_124062995_124063115_124063206_124063847_124064052_124065875_124065947_124066174_124066263_124066355_124066437_124068563_124068657_124071148_124071324_124076331_124076472_124077956_124078059_124081379_124081529_124083420_124083550_124086546_124086771_124090574_124090765_124094017_124094145_124095371_124095450_124100573
H1_mix_00091025	chrX	+	5731	33	NIC	ENSG00000101972.20	novel	6143	38	NA	NA	-20	2	combination_of_known_splicesites	TRUE	canonical	2	10	junction_12	92.4854718320667	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTATGTTTTCTCTTGT	11	True	NA	14	True	AATAAA	-16	NA	123962073	124102499	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_123962107_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568_124042646_124045163_124045369_124047353_124047506_124049004_124049079_124050185_124050310_124051120_124051220_124051314_124051395_124057865_124057978_124061223_124061342_124061770_124061875_124062901_124062995_124063115_124063206_124063847_124064052_124065875_124065947_124066174_124066263_124066355_124066437_124068563_124068657_124071148_124071324_124076331_124076472_124077956_124078059_124081379_124081529_124083420_124083550_124086546_124086771_124090574_124090765_124090853_124090965_124094017_124094145_124095371_124095450_124100573
H1_mix_00091028	chrX	+	4953	23	ISM	ENSG00000122126.18	ENST00000371113.9	5173	24	485	0	-4	0	3prime_fragment	FALSE	canonical	3	30	junction_5	13.0156453852042	6215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGTGTGATTTTGGTGA	410	False	NA	11	True	AATAAA	-19	NA	129540743	129592556	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_129540824_129544957_129545038_129548562_129548602_129557324_129557436_129557860_129557951_129558632_129558754_129558839_129559002_129560549_129560652_129561178_129561294_129562383_129562501_129562598_129562787_129565771_129565884_129567253_129567364_129569263_129569400_129575139_129575251_129575896_129576063_129576316_129576553_129584343_129584368_129587001_129587119_129588178_129588264_129588885_129589014_129589844_129589957_129590145
H1_mix_00091029	chrX	+	5009	22	ISM	ENSG00000122126.18	ENST00000357121.5	5138	23	389	5	-84	0	3prime_fragment	FALSE	canonical	3	30	junction_5	12.9301279427846	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGTGTGATTTTGGTGA	330	False	NA	11	True	AATAAA	-19	NA	129540663	129592556	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_129540824_129544957_129545038_129548562_129548602_129557324_129557436_129557860_129557951_129558632_129558754_129558839_129559002_129560549_129560652_129561178_129561294_129562383_129562501_129562598_129562787_129565771_129565884_129567253_129567364_129569263_129569400_129575139_129575251_129575896_129576063_129576316_129576553_129587001_129587119_129588178_129588264_129588885_129589014_129589844_129589957_129590145
H1_mix_00091030	chrX	+	979	7	FSM	ENSG00000156697.13	ENST00000427972.1	979	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	43.9447253818805	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAGGAACCTGCCCCAGA	7171	False	NA	NA	False	AAAAAG	-33	NA	129913343	129924910	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_129913396_129919174_129919295_129919394_129919490_129920456_129920581_129920674_129920753_129921193_129921588_129924794
H1_mix_00091031	chrX	+	7327	14	NNC	ENSG00000085185.16	novel	2221	4	NA	NA	1752	-53	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	6.0813031926315	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCATTTTAAGCAACTGG	1749	False	NA	-44	True	NA	NA	NA	129984386	130058018	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_129984430_130005187_130005318_130012577_130012669_130012949_130016214_130020984_130021151_130022896_130022978_130024989_130025380_130028634_130028862_130034454_130034677_130037366_130037534_130039136_130039283_130050716_130050795_130051859_130052017_130055853
H1_mix_00091032	chrX	+	3366	10	NIC	ENSG00000085185.16	novel	7465	14	NA	NA	1644	-199	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	6.16441400296898	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATACATATATATATATA	3014	False	NA	NA	False	AATACA	-5	NA	130016110	130057872	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_130016214_130020984_130021151_130022896_130022978_130028634_130028862_130034454_130034677_130037366_130037534_130039136_130039283_130050716_130050795_130051859_130052017_130055853
H1_mix_00091037	chrX	+	778	1	Intergenic	novelGene_1737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCTAATGATCAAAGTTGT	1581	False	NA	NA	False	NA	NA	NA	130496716	130497494	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_130496700_130497500
H1_mix_00091038	chrX	+	593	1	FSM	ENSG00000214961.2	ENST00000399325.2	1372	1	96	683	96	-683	mono-exon	FALSE	NA	NA	NA	NA	NA	184	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCTCGGGAATGATTTTG	NA	False	NA	NA	False	NA	NA	NA	134272382	134272975	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_134272400_134273000
H1_mix_00091040	chrX	+	2003	4	FSM	ENSG00000156500.16	ENST00000623326.4	2063	4	60	0	-2	0	multi-exon	TRUE	canonical	2	5	junction_3	15.1070255914995	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCTGGGCATGATGGTAC	-8	True	NA	NA	False	AATACA	-7	NA	134807250	134822990	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_134807342_134807539_134807709_134814770_134814850_134821326
H1_mix_00091041	chrX	+	1440	11	FSM	ENSG00000156500.16	ENST00000645433.2	1592	11	14	138	-2	84	multi-exon	FALSE	canonical	2	7	junction_1	12.0681398732365	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTTATGACTAAGTTAT	-8	True	NA	117	True	AAGAAA	-18	NA	134807250	134854694	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_134807342_134807539_134807709_134814770_134814850_134829225_134829283_134845204_134845249_134845346_134845402_134847382_134847476_134847882_134847972_134849166_134849229_134852799_134852897_134854090
H1_mix_00091043	chrX	+	1021	7	FSM	ENSG00000156500.16	ENST00000370784.8	1368	7	347	0	259	0	multi-exon	FALSE	canonical	2	3	junction_5	14.5764269360575	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAATGATCCATGCTAGT	223	False	NA	33	True	AGTAAA	-21	NA	134807539	134854610	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_134807709_134814770_134814850_134829225_134829283_134845204_134845249_134845346_134845402_134852799_134852897_134854090
H1_mix_00091045	chrX	+	3932	18	FSM	ENSG00000165359.16	ENST00000639893.2	3904	18	-29	1	-28	0	multi-exon	FALSE	canonical	3	19	junction_4	11.203373194456	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAATGCTGGATAAATTTC	-10	True	NA	15	True	AATAAA	-26	NA	135520630	135582509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_135521104_135521240_135521319_135545422_135545573_135546379_135546470_135546701_135546886_135547136_135547266_135549641_135549806_135551993_135552147_135556167_135556301_135569336_135569432_135570435_135570547_135572814_135573034_135573938_135574063_135575083_135575227_135577192_135577428_135579787_135580163_135581049_135581144_135581527
H1_mix_00091048	chrX	+	2787	10	NIC	ENSG00000102241.12	novel	3019	10	NA	NA	14	-11	combination_of_known_junctions	FALSE	canonical	3	166	junction_1	197.194645959422	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCAGAAACTGAAAATTGGA	17	True	NA	27	True	AATAAA	-16	NA	136497247	136512331	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_136497440_136497675_136497871_136499597_136499779_136500157_136500206_136500663_136500819_136502777_136502942_136504363_136504464_136509090_136509181_136510081_136510220_136510807
H1_mix_00091050	chrX	+	3744	3	NNC	ENSG00000226031.5	novel	584	4	NA	NA	-262	2815	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	4	28	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCCAAGAAATAGTTTAAC	NA	False	NA	NA	False	TATAAA	-30	NA	138711844	138719432	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_138711961_138714723_138714810_138715890
H1_mix_00091052	chrX	+	1184	2	FSM	ENSG00000203930.13	ENST00000648347.1	1184	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTCTAACATGTTCTATA	16	True	NA	NA	False	NA	NA	NA	140783291	140784659	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_140784273_140784456
H1_mix_00091053	chrX	+	458	2	FSM	ENSG00000227234.2	ENST00000449283.2	466	2	8	0	8	0	multi-exon	FALSE	canonical	3	15	junction_1	0	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTGTATATCTCTGCC	4	True	NA	11	True	AATAAA	-15	NA	141002601	141003706	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_141002784_141003430
H1_mix_00091055	chrX	+	4968	1	FSM	ENSG00000185985.11	ENST00000370490.1	7672	1	4172	-1468	4172	1468	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTATTTTGGGAAGTGA	805	False	NA	NA	False	GATAAA	-15	NA	145822342	145827310	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_145822300_145827300
H1_mix_00091056	chrX	+	4260	16	FSM	ENSG00000274086.1_ENSG00000102081.16	ENST00000691214.1	4067	16	-178	-15	-21	0	multi-exon	TRUE	canonical	3	43	junction_13	56.5278299208059	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGCAAAAAATTAGTCT	11	False	NA	63	True	ATTAAA	-15	NA	147911897	147951112	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_147912231_147921932_147921986_147925539_147925634_147928321_147928394_147928658_147928808_147929947_147930042_147930127_147930245_147932424_147932596_147932684_147932764_147936503_147936614_147937465_147937601_147940575_147940663_147943130_147943327_147944943_147945052_147945533_147945617_147948733
H1_mix_00091064	chrX	+	787	1	FSM	ENSG00000219507.4	ENST00000498161.1	514	1	-108	-165	-108	165	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGGTACCCCCCCCCAA	48	False	NA	56	True	AATAAA	-3	NA	148052124	148052911	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_148052100_148052900
H1_mix_00091065	chrX	+	1403	5	FSM	ENSG00000197620.11	ENST00000423421.5	1403	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	32.6649659421222	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTAGTGTTTGAGGCTT	-43	True	NA	NA	False	AATAAA	-15	NA	149540974	149547309	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_149541344_149542018_149542067_149545367_149545501_149545601_149545884_149546738
H1_mix_00091068	chrX	+	380	5	ISM	ENSG00000171100.16	ENST00000692015.1	3179	13	-19	34103	1	-6850	5prime_fragment	FALSE	canonical	2	4	junction_4	36.0164892792177	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGGTAAGATGTTAGATG	-17	True	NA	NA	False	AATACA	-4	NA	150568602	150639021	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_150568663_150592604_150592678_150596497_150596571_150598591_150598687_150638942
H1_mix_00091069	chrX	+	1245	10	FSM	ENSG00000063601.17	ENST00000542156.5	1227	10	-18	0	-1	0	multi-exon	FALSE	canonical	1	1	junction_9	34.6039318396831	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGGAAGTATGCCCTCCT	-8	True	NA	NA	False	NA	NA	NA	150693377	150735499	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_150693677_150699194_150699301_150718624_150718701_150727214_150727310_150727683_150727792_150730108_150730211_150730524_150730609_150731469_150731620_150732541_150732731_150735463
H1_mix_00091070	chrX	+	2608	16	FSM	ENSG00000063601.17	ENST00000370390.7	2755	16	4	143	-1	36	multi-exon	FALSE	canonical	2	5	junction_15	26.1775136753325	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTAGATTTTTCCTTTGA	-8	True	NA	50	True	NA	NA	NA	150693377	150764960	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_150693677_150699194_150699301_150718624_150718701_150727214_150727310_150727683_150727792_150730108_150730211_150730524_150730609_150731469_150731620_150732541_150732731_150736594_150736781_150737241_150737449_150744360_150744454_150750729_150750844_150755688_150755866_150762564_150762738_150764511
H1_mix_00091071	chrX	+	397	4	FSM	ENSG00000063601.17	ENST00000493480.1	448	4	51	0	51	0	multi-exon	FALSE	canonical	3	93	junction_3	7.84573486395988	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTGGAAAGTTTATGATC	8544	False	NA	NA	False	TATAAA	-18	NA	150727163	150730565	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_150727310_150727683_150727792_150730108_150730211_150730524
H1_mix_00091072	chrX	+	837	5	FSM	ENSG00000063601.17	ENST00000370387.2	2056	5	1196	23	1196	-23	multi-exon	FALSE	canonical	3	7	junction_4	38.2295697072306	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTAGTAAAGAAGCAGTT	NA	False	NA	NA	False	AAAAAG	-37	NA	150736594	150751266	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_150736781_150737241_150737449_150744360_150744454_150750729_150750844_150751029
H1_mix_00091073	chrX	+	1387	1	FSM	ENSG00000269993.1	ENST00000602313.1	470	1	-920	3	-920	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	382	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTTTGTGGTTTGTGGA	878	False	NA	6	True	ATTAAA	-19	NA	151181465	151182852	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_151181500_151182900
H1_mix_00091074	chrX	+	5691	4	FSM	ENSG00000130032.17	ENST00000674457.1	5705	4	14	0	-7	0	multi-exon	FALSE	canonical	1	1	junction_1	4.49691252107735	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCGTCATCCATCTTG	72	False	NA	16	True	AATAAA	-23	NA	151695471	151705924	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_151695545_151698783_151698822_151699995_151700157_151700505
H1_mix_00091075	chrX	+	4378	23	NNC	ENSG00000147394.19	novel	4305	23	NA	NA	-16360	-2	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_9	14.5079772869507	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACATGTGTCAGTGTTAAA	10	True	NA	11	True	AATAAA	-11	NA	152898081	152973469	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_152898239_152914444_152914524_152914709_152914834_152915137_152915204_152917130_152917170_152917284_152917363_152918064_152918155_152918982_152919082_152920327_152920412_152920709_152920749_152922172_152922257_152928574_152928662_152931671_152931777_152932872_152932972_152938073_152938164_152945266_152945465_152959698_152959897_152963838_152963950_152965446_152965528_152967166_152967239_152969381_152969485_152970442_152970542_152971273
H1_mix_00091076	chrX	+	4415	24	FSM	ENSG00000147394.19	ENST00000535861.6	4374	24	-45	4	3	-3	multi-exon	FALSE	canonical	3	8	junction_15	21.1885049265113	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGTTAAAGTTTTCTT	11	False	NA	19	True	AATAAA	-19	NA	152914444	152973477	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_152914524_152914709_152914834_152915137_152915204_152917130_152917170_152917284_152917363_152918064_152918155_152918982_152919082_152920327_152920412_152920709_152920749_152922172_152922257_152922719_152922810_152928574_152928662_152931671_152931777_152932872_152932972_152936417_152936514_152938073_152938164_152945266_152945465_152959698_152959897_152963838_152963950_152965446_152965528_152967166_152967239_152969381_152969485_152970442_152970542_152971273
H1_mix_00091077	chrX	+	3545	14	FSM	ENSG00000147394.19	ENST00000426821.6	3545	14	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	16.2170923053498	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCAGTGTTAAAGTTT	24	False	NA	15	True	AATAAA	-15	NA	152920348	152973473	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_152920412_152920706_152920749_152922172_152922257_152931671_152931777_152932872_152932972_152938073_152938164_152945266_152945465_152959698_152959897_152963838_152963950_152965446_152965528_152967166_152967239_152969381_152969485_152970442_152970542_152971273
H1_mix_00091078	chrX	+	717	5	FSM	ENSG00000198753.12	ENST00000482654.1	717	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGACCTCCGTGACCCA	8320	False	NA	NA	False	NA	NA	NA	153774928	153776399	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_153775104_153775300_153775404_153775593_153775661_153775886_153776215_153776355
H1_mix_00091080	chrX	+	2482	4	FSM	ENSG00000180879.14	ENST00000460616.5	2482	4	0	0	0	0	multi-exon	FALSE	canonical	3	1858	junction_3	109.393276250823	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGACCTGGGGCTGCTGG	2	True	NA	41	True	AATAAA	-22	NA	153794658	153798493	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_153796553_153797457_153797533_153797724_153797815_153798070
H1_mix_00091081	chrX	+	441	3	FSM	ENSG00000180879.14	ENST00000447375.1	427	3	-15	1	-15	0	multi-exon	FALSE	canonical	3	1774	junction_2	42	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTGGGGCTGCTGGCTTG	1156	False	NA	45	True	AATAAA	-26	NA	153797608	153798497	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_153797815_153798070_153798137_153798328
H1_mix_00091083	chrX	+	1805	10	FSM	ENSG00000102125.16	ENST00000612460.5	1790	10	-15	0	0	0	multi-exon	FALSE	canonical	3	54	junction_6	36.7950613970119	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATATGTGTTGGCTTGTT	-40	True	NA	-2	True	NA	NA	NA	154411523	154421700	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154411953_154412085_154412215_154413206_154413253_154413481_154413568_154419542_154419624_154419704_154419747_154420031_154420095_154420211_154420265_154420657_154420736_154420902
H1_mix_00091086	chrX	+	1483	8	FSM	ENSG00000102125.16	ENST00000483674.3	1483	8	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	34.8372308466276	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTGGCCTCTCTGTAG	268	False	NA	24	True	CATAAA	-26	NA	154412085	154421726	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154412215_154413206_154413253_154413481_154413568_154419542_154419747_154420031_154420095_154420211_154420265_154420657_154420736_154420902
H1_mix_00091089	chrX	+	4536	10	FSM	ENSG00000071553.18	ENST00000455205.5	4515	10	-21	0	0	0	multi-exon	FALSE	canonical	2	32	junction_2	198.339775805729	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGGGCCTCTTGTCGCTC	-2	True	NA	15	True	AATAAA	-20	NA	154428676	154436515	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154428854_154429047_154431658_154431829_154431905_154432265_154432460_154432930_154432972_154433634_154433721_154434207_154434447_154435138_154435187_154435273_154435506_154435681
H1_mix_00091095	chrX	+	682	4	FSM	ENSG00000071859.15	ENST00000478509.1	682	4	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_2	33.3566585057117	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGGCCCTCTGGGCCTCTG	2096	False	NA	NA	False	NA	NA	NA	154446265	154449135	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154446561_154448483_154448561_154448689_154448757_154448892
H1_mix_00091097	chrX	+	384	3	FSM	ENSG00000130827.6	ENST00000467463.1	384	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	3	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGACCCTGCAGCCCATGG	8137	False	NA	NA	False	NA	NA	NA	154466418	154467175	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154466513_154466622_154466794_154467056
H1_mix_00091099	chrX	+	745	2	FSM	ENSG00000130826.18	ENST00000475423.1	587	2	-135	-23	-25	23	multi-exon	FALSE	canonical	3	1170	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGTAATGGAATTGTTCAA	NA	False	NA	NA	False	TTTAAA	-18	NA	154762716	154765378	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154762982_154764898
H1_mix_00091103	chrX	+	671	3	FSM	ENSG00000130826.18	ENST00000484317.5	671	3	0	0	0	0	multi-exon	FALSE	canonical	3	1063	junction_1	27	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTAAGAGGGGATGTTTA	5098	False	NA	NA	False	NA	NA	NA	154768023	154770876	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154768433_154769166_154769311_154770758
H1_mix_00091104	chrX	+	2641	10	FSM	ENSG00000185515.16	ENST00000369459.6	2641	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	94.4716300742656	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATATTATTGTCAATGT	-7	True	NA	8	True	AATAAA	-21	NA	155071498	155123072	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_155071651_155072326_155072344_155073376_155073432_155077169_155077290_155078615_155078704_155089262_155089352_155090783_155090840_155116710_155116755_155119998_155120169_155121222
H1_mix_00091107	chrX	+	1583	10	NIC	ENSG00000182484.15	novel	1826	8	NA	NA	45	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	93.7958118520633	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTCTGCCTGTGCTCCA	NA	False	NA	NA	False	NA	NA	NA	156021489	156025554	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_156021564_156021680_156021793_156021998_156022146_156022322_156022540_156022698_156022835_156023011_156023214_156023301_156023461_156024119_156024273_156025031_156025101_156025240
H1_mix_00091109	chrX	-	4968	6	NIC	ENSG00000167393.18	novel	2378	13	NA	NA	48	-1	intron_retention	FALSE	canonical	3	405	junction_4	36.1861852092757	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAGCGTGTTGATTGCCG	NA	False	NA	-13	True	GATAAA	-15	NA	345578	334239	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_338711_338777_338897_340764_340941_341306_341397_341882_341932_345515
H1_mix_00091110	chrX	-	2188	11	NIC	ENSG00000167393.18	novel	2378	13	NA	NA	-364	0	intron_retention	FALSE	canonical	3	100	junction_10	107.461621056078	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGACGGGTGAGTGGGGA	70	False	NA	NA	False	NA	NA	NA	374408	338612	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_338897_340764_340941_341306_341397_341882_341932_345515_345673_346173_346261_346700_346776_347233_347337_347589_347694_361404_361591_373531
H1_mix_00091111	chrX	-	2423	5	NNC	ENSG00000169100.14	novel	1451	4	NA	NA	0	4132	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	2040.98432135085	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCCGAGATTGCACCATT	55	False	NA	NA	False	NA	NA	NA	1392088	1382019	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_1382066_1385200_1386760_1387278_1387420_1389240_1389728_1391898
H1_mix_00091112	chrX	-	1738	4	FSM	ENSG00000169100.14	ENST00000475167.6	900	4	-838	0	-828	0	multi-exon	FALSE	canonical	3	27	junction_3	2329.44547526278	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCATGATGATGCAGTCCG	NA	False	NA	NA	False	NA	NA	NA	1392941	1387310	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_1387420_1389240_1389728_1390191_1390291_1391898
H1_mix_00091113	chrX	-	2046	13	FSM	ENSG00000169093.16	ENST00000534940.6	2048	13	0	2	0	0	multi-exon	FALSE	canonical	0	0	junction_12	187.294090640599	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTGCCTCCTCCATAG	-11	True	NA	-16	True	AATAAA	-14	NA	1453762	1403140	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_1403490_1412731_1412855_1417972_1418117_1418981_1419115_1421657_1421843_1425524_1425688_1427733_1428122_1432268_1432378_1435021_1435084_1435693_1435759_1439096_1439145_1442185_1442318_1453617
H1_mix_00091114	chrX	-	573	3	FSM	ENSG00000169093.16	ENST00000462195.6	573	3	0	0	0	0	multi-exon	FALSE	canonical	3	548	junction_2	15.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTAAGAGGTGATTCTACC	NA	False	NA	NA	False	AATAAA	-19	NA	1435728	1431901	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_1432378_1435021_1435084_1435693
H1_mix_00091115	chrX	-	2423	6	NIC	ENSG00000169084.15	novel	2579	7	NA	NA	65	-6	combination_of_known_junctions	FALSE	canonical	3	59	junction_4	105.247517785457	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATCATTCATCCTCCG	1941	False	NA	NA	False	AATAAA	-24	NA	2500895	2219511	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_2221230_2243022_2243231_2266739_2266948_2291501_2291604_2425196_2425305_2500816
H1_mix_00091116	chrX	-	679	5	FSM	ENSG00000169084.15	ENST00000478825.7	679	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	66.874883177468	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTCCTGGTGAAATTGC	2247	False	NA	NA	False	NA	NA	NA	2500589	2291501	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_2291604_2392353_2392475_2408744_2408814_2425196_2425305_2500310
H1_mix_00091117	chrX	-	469	4	FSM	ENSG00000169084.15	ENST00000430536.7	490	4	0	21	0	-21	multi-exon	FALSE	canonical	0	0	junction_1	81.9810276154727	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGCACCCCGTCTCTGTTT	-15	True	NA	NA	False	NA	NA	NA	2500960	2337851	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_2338000_2408744_2408814_2425196_2425305_2500816
H1_mix_00091118	chrX	-	1174	6	NIC	ENSG00000157399.17	novel	1338	6	NA	NA	-1	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	25.5734237050888	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTCTTTGTTTAATTTTT	3990	False	NA	NA	False	AATAAA	-30	NA	2964253	2951914	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_2952561_2953142_2953266_2955415_2955538_2958273_2958436_2960377_2960469_2964223
H1_mix_00091119	chrX	-	965	5	FSM	ENSG00000157399.17	ENST00000683071.1	973	5	0	8	0	-8	multi-exon	FALSE	canonical	3	13	junction_3	20.0670750235305	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTTCTTTGTTTAATT	28	True	NA	NA	False	AATAAA	-27	NA	2964257	2951917	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_2952561_2953142_2953266_2955415_2955538_2960377_2960421_2964223
H1_mix_00091120	chrX	-	689	5	FSM	ENSG00000285756.2	ENST00000653447.1	692	5	0	3	0	-3	multi-exon	FALSE	canonical	0	0	junction_4	28.6749019178793	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGGGCTGTGTGCTGGTTG	NA	False	NA	-7	True	ATTAAA	-22	NA	3826631	3817530	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_3817779_3818441_3818501_3822373_3822581_3825087_3825232_3826600
H1_mix_00091122	chrX	-	2673	2	FSM	ENSG00000285756.2	ENST00000671583.1	2673	2	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTACGCTGCTTTCTTC	138	False	NA	NA	False	NA	NA	NA	3843771	3827150	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_3829393_3843340
H1_mix_00091123	chrX	-	2203	3	FSM	ENSG00000285756.2	ENST00000381108.3	2198	3	0	-5	0	0	multi-exon	FALSE	canonical	3	30	junction_1	18.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGCCTCCACTTACAAACT	NA	False	NA	NA	False	ATTAAA	-19	NA	3863574	3853004	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_3854928_3860789_3860997_3863501
H1_mix_00091124	chrX	-	5111	3	NNC	ENSG00000285756.2	novel	1099	2	NA	NA	0	1787	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_1	49	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCTATCATCTATCTAC	NA	False	NA	NA	False	NA	NA	NA	3920746	3889650	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_3893352_3905375_3906233_3920193
H1_mix_00091125	chrX	-	444	2	Intergenic	novelGene_1637	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGAAAGACGGCTGAGGC	NA	False	NA	NA	False	NA	NA	NA	4897326	4891613	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_4891730_4896998
H1_mix_00091126	chrX	-	4136	1	Intergenic	novelGene_1638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAGACTAGGAAGGGACT	NA	False	NA	NA	False	NA	NA	NA	4897284	4893148	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_4893100_4897300
H1_mix_00091127	chrX	-	5951	7	NNC	ENSG00000146938.16	novel	3750	7	NA	NA	-69	-19918	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	60.265385310862	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGAAGAAGCTCA	NA	False	NA	NA	False	AAAACA	-26	NA	6228936	5860554	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_5860582_5890044_5893667_5903076_5903867_5909053_5909240_6029279_6029433_6150994_6151772_6228540
H1_mix_00091128	chrX	-	6791	6	FSM	ENSG00000146938.16	ENST00000381093.6	5865	6	-129	-797	-129	797	multi-exon	FALSE	canonical	3	34	junction_5	52.3511222420303	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACATACACATATATGTAC	1527	False	NA	NA	False	AATACA	-6	NA	6227332	5889234	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_5893667_5903076_5903867_5909053_5909240_6029279_6029433_6150994_6151772_6226879
H1_mix_00091130	chrX	-	1887	5	ISM	ENSG00000101850.13	ENST00000467482.6	1645	9	18809	65	-7319	-65	3prime_fragment	FALSE	canonical	3	149	junction_3	14.0712472794703	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGCCTGACTTGGATTC	NA	False	NA	-16	True	AATAAA	-17	NA	9747038	9725410	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_9725841_9739484_9739720_9741337_9741456_9743564_9743674_9746043
H1_mix_00091131	chrX	-	1476	8	NIC	ENSG00000101850.13	novel	1645	9	NA	NA	10	-66	combination_of_known_splicesites	FALSE	canonical	3	18	junction_5	51.4249998759835	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCAGCCTGACTTGGATT	184	False	NA	-17	True	AATAAA	-16	NA	9765837	9725411	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_9725841_9739484_9739720_9741337_9741456_9743564_9743674_9746043_9746154_9759331_9759427_9760716_9760827_9765567
H1_mix_00091134	chrX	-	3016	6	NNC	ENSG00000196459.15	novel	2842	6	NA	NA	0	218	at_least_one_novel_splicesite	FALSE	non_canonical	3	23	junction_4	45.0892448373223	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCCTCAATGAGCATATC	38	False	NA	NA	False	NA	NA	NA	13734575	13712025	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_13714506_13716003_13716086_13716529_13716679_13719870_13719983_13734043_13734186_13734524
H1_mix_00091135	chrX	-	5961	5	FSM	ENSG00000046653.15	ENST00000495211.2	683	5	63	-5341	63	113	multi-exon	FALSE	canonical	3	7	junction_4	375.960353627879	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAATTGTTTTATTTCTG	3181	False	NA	70	True	NA	NA	NA	13783858	13770825	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_13776304_13777351_13777426_13779817_13779990_13783364_13783522_13783778
H1_mix_00091136	chrX	-	3370	8	FSM	ENSG00000046653.15	ENST00000316715.9	3118	8	-139	-113	91	113	multi-exon	FALSE	canonical	2	5	junction_7	373.151389095195	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAATTGTTTTATTTCTG	126	False	NA	70	True	NA	NA	NA	13817232	13770825	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_13773031_13776237_13776304_13777351_13777426_13779817_13779990_13783364_13783522_13785621_13785809_13807649_13807770_13816843
H1_mix_00091138	chrX	-	4736	4	ISM	ENSG00000046647.14	ENST00000332885.7	868	5	-259	-437	18	-1	intron_retention	FALSE	canonical	3	70	junction_3	28.3117564901148	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATACTGGTTTTTTATGTT	26	False	NA	-15	True	CATAAA	-16	NA	14029874	14008673	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_14009170_14020077_14020535_14021463_14021512_14026139
H1_mix_00091139	chrX	-	960	5	FSM	ENSG00000165195.16	ENST00000634582.1	965	5	5	0	5	0	multi-exon	FALSE	canonical	2	3	junction_4	17.0348906659245	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTTCTTGCACTTATTT	-5	True	NA	NA	False	GATAAA	-24	NA	15335539	15321324	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_15321773_15324664_15324872_15325019_15325153_15325913_15326047_15335500
H1_mix_00091140	chrX	-	839	6	FSM	ENSG00000165195.16	ENST00000634640.1	854	6	15	0	5	0	multi-exon	FALSE	canonical	2	9	junction_4	14.1619207736804	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAACTATTCTCACAGTAAA	-5	True	NA	NA	False	AATAGA	-30	NA	15335539	15321564	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_15321773_15324664_15324872_15325019_15325153_15325913_15326047_15331873_15331993_15335500
H1_mix_00091141	chrX	-	646	1	FSM	ENSG00000165195.16	ENST00000634484.1	1320	1	134	540	134	-540	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGAGTTCAGCTTTTCTGG	7307	False	NA	NA	False	NA	NA	NA	15328822	15328176	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_15328200_15328800
H1_mix_00091142	chrX	-	1148	10	NNC	ENSG00000087842.11	novel	1274	10	NA	NA	15	-4	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_9	28.2925632596707	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAGTGTTTTTCATTT	9	True	NA	-4	True	AATAAA	-20	NA	15493318	15384802	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_15385117_15390184_15390252_15397448_15397532_15407505_15407551_15425905_15425991_15455847_15456055_15459656_15459741_15479728_15479822_15491161_15491310_15493296
H1_mix_00091143	chrX	-	3516	6	NNC	ENSG00000182287.15	novel	3492	5	NA	NA	0	52403	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	838.36588671057	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCAGGGCATGGTGATGT	20	True	NA	NA	False	NA	NA	NA	15854804	15773402	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_15773429_15830060_15833008_15845378_15845517_15845902_15846012_15852345_15852525_15854687
H1_mix_00091144	chrX	-	2111	7	NNC	ENSG00000182287.15	novel	1946	6	NA	NA	0	29021	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	809.748400567869	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGATTTGAAACAAAATGATC	-6	True	NA	NA	False	NA	NA	NA	15854755	15796784	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_15796813_15830060_15831569_15833443_15833525_15845378_15845517_15845902_15846012_15852345_15852525_15854687
H1_mix_00091145	chrX	-	3526	6	NNC	ENSG00000182287.15	novel	2365	6	NA	NA	0	29021	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	838.36588671057	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGATTTGAAACAAAATGATC	11	True	NA	NA	False	NA	NA	NA	15854813	15796784	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_15796812_15830060_15833008_15845378_15845517_15845902_15846012_15852345_15852525_15854687
H1_mix_00091146	chrX	-	2064	6	FSM	ENSG00000182287.15	ENST00000479184.2	1946	6	-24	-94	0	0	multi-exon	FALSE	canonical	3	235	junction_1	720.260897175461	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATACAGCTGCTTGCTTT	11	True	NA	-93	True	NA	NA	NA	15854813	15830137	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_15831569_15833443_15833525_15845378_15845517_15845902_15846012_15852345_15852525_15854687
H1_mix_00091147	chrX	-	606	4	ISM	ENSG00000238178.7	ENST00000435789.1	1037	6	3491	0	225	0	3prime_fragment	FALSE	canonical	2	8	junction_3	45.8427263102398	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGCTTCCATTGTTATCAA	1300	False	NA	-25	True	AATAAA	-27	NA	16167378	16153219	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_16153464_16154597_16154681_16157752_16157860_16167206
H1_mix_00091148	chrX	-	2065	3	Intergenic	novelGene_1650	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCGTTCCCATAGAACATG	NA	False	NA	NA	False	NA	NA	NA	16579341	16462842	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_16463064_16576521_16576741_16577716
H1_mix_00091149	chrX	-	858	4	FSM	ENSG00000102054.18	ENST00000330735.7	858	4	0	0	0	0	multi-exon	FALSE	canonical	3	857	junction_1	63.5941995957353	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGTTTTTTTAAAAGCT	NA	False	NA	-13	True	AATAAA	-15	NA	16852280	16844649	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_16845104_16845827_16845939_16849243_16849302_16852045
H1_mix_00091151	chrX	-	1535	3	FSM	ENSG00000102054.18	ENST00000486166.1	1535	3	0	0	0	0	multi-exon	FALSE	canonical	3	827	junction_2	25	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATGTGACAGTTTTCTGG	4255	False	NA	NA	False	ATTAAA	-40	NA	16858803	16852551	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_16853843_16857593_16857710_16858675
H1_mix_00091152	chrX	-	2388	3	FSM	ENSG00000131831.18	ENST00000545871.1	2421	3	35	-2	-4	0	multi-exon	FALSE	canonical	1	1	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTTGCAGTATTTCATCA	-4	True	NA	0	True	AATAAA	-43	NA	17861302	17800048	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_17802035_17837536_17837734_17861097
H1_mix_00091153	chrX	-	4182	16	NNC	ENSG00000102098.19	novel	4162	15	NA	NA	0	27220	intron_retention	FALSE	non_canonical	0	0	junction_1	41.9558498106442	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAGTAATAAACATTTTCA	-1	True	NA	NA	False	NA	NA	NA	18354688	18212092	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_18212113_18239312_18241380_18242438_18242591_18246576_18246829_18247768_18247883_18256847_18257031_18258043_18258248_18260170_18260292_18265584_18265803_18304971_18305216_18320331_18320421_18323858_18324094_18324906_18324978_18330586_18330656_18334049_18334096_18354591
H1_mix_00091155	chrX	-	5203	31	NIC	ENSG00000044446.12	novel	5077	33	NA	NA	-247	-37	intron_retention	FALSE	canonical	3	52	junction_26	12.8470057038812	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTGTAAATAATAAACCT	-1	True	NA	-47	True	AAAACA	-2	NA	18984361	18892334	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_18893656_18894203_18894405_18895137_18895192_18897162_18897334_18901484_18901604_18905757_18905860_18906494_18906625_18906735_18906815_18907017_18907098_18907899_18908057_18908800_18908935_18910871_18910961_18918680_18918855_18920031_18920202_18924055_18924135_18924380_18924526_18925667_18925778_18926452_18926588_18929227_18929307_18931640_18931749_18936054_18936151_18938626_18938750_18939994_18940049_18941528_18941676_18943709_18943809_18945077_18945159_18948743_18948827_18951103_18951273_18952493_18952542_18954253_18954413_18983854
H1_mix_00091159	chrX	-	4879	29	FSM	ENSG00000180815.15	ENST00000338883.9	4879	29	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_28	5.17697019579631	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAATGGTCAGCGCGAAC	-13	True	NA	-3	True	AATAAA	-15	NA	19515508	19360058	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_19360834_19361338_19361416_19361492_19361594_19362737_19362851_19369053_19369220_19370958_19371065_19371344_19371531_19372652_19372828_19373535_19373696_19374476_19374661_19380119_19380278_19392001_19392108_19392342_19392474_19395080_19395209_19398225_19398360_19400575_19400664_19407187_19407284_19409923_19409974_19413356_19413465_19415106_19415258_19425530_19425691_19426230_19426344_19431437_19431609_19456912_19457020_19459984_19460154_19464212_19464407_19486481_19486506_19488827_19488968_19514900
H1_mix_00091160	chrX	-	3243	18	NNC	ENSG00000147010.18	novel	4728	18	NA	NA	-47	11988	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	178.012926710744	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACGAGTGGGGGCAGGC	253	False	NA	NA	False	NA	NA	NA	19887647	19521988	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_19522021_19535411_19536459_19537716_19537781_19541924_19542194_19549973_19550084_19569102_19569189_19588642_19588803_19592066_19592148_19594948_19595001_19607937_19608046_19631863_19631959_19645399_19645476_19683822_19684029_19695611_19695742_19706880_19706985_19746317_19746442_19836124_19836283_19887306
H1_mix_00091164	chrX	-	2461	16	NNC	ENSG00000123130.17	novel	4318	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	82.5659063348116	6902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGACCCTTAAATTATT	1	True	NA	-1	True	AGTAAA	-20	NA	23743250	23701054	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_23701818_23703621_23703983_23704693_23704845_23704992_23705081_23705508_23705595_23705767_23705859_23706627_23706740_23707876_23707945_23713134_23713209_23721880_23721985_23722669_23722754_23730526_23730565_23730815_23730987_23733171_23733218_23735918_23736017_23743124
H1_mix_00091165	chrX	-	1301	6	FSM	ENSG00000123130.17	ENST00000379297.5	1295	6	0	-6	0	0	multi-exon	FALSE	canonical	3	222	junction_3	17.7831380807775	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGAACCTACCATGTTGC	NA	False	NA	-12	True	AATAAA	-21	NA	23707200	23703670	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_23703983_23704693_23704845_23704992_23705081_23705508_23705595_23705767_23705859_23706627
H1_mix_00091169	chrX	-	272	1	FSM	ENSG00000223611.7	ENST00000486479.3	5860	1	1485	4103	1485	-4103	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTTTCAGACATGCATGG	1484	False	NA	NA	False	NA	NA	NA	24312584	24312312	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_24312300_24312600
H1_mix_00091170	chrX	-	678	1	FSM	ENSG00000232472.1	ENST00000447718.1	678	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCATCCTGGATCATGGC	NA	False	NA	-58	True	NA	NA	NA	24789069	24788391	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_24788400_24789100
H1_mix_00091171	chrX	-	6214	7	FSM	ENSG00000157625.16	ENST00000378930.7	6255	7	42	-1	42	0	multi-exon	FALSE	canonical	3	28	junction_6	4.08248290463863	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTGCATCTTTTCTGCG	NA	False	NA	0	True	AATAAA	-21	NA	30859678	30827441	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_30831576_30834050_30834153_30842965_30843050_30846550_30846645_30852777_30852939_30854115_30855563_30859486
H1_mix_00091172	chrX	-	786	6	ISM	ENSG00000157625.16	ENST00000288422.4	6647	11	-121	28081	-121	-12535	5prime_fragment	FALSE	canonical	3	25	junction_4	5.67802782663136	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAGAGTAGCAAATACTTA	41	False	NA	NA	False	NA	NA	NA	30889375	30855522	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_30855563_30859486_30859679_30867114_30867219_30867464_30867550_30871698_30871802_30889113
H1_mix_00091173	chrX	-	2224	16	FSM	ENSG00000198947.18	ENST00000361471.8	2224	16	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	12.0288541986896	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTTAAAAATTTATAACAG	-1	True	NA	NA	False	NA	NA	NA	31266907	31121555	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_31121931_31134101_31134195_31146290_31146415_31147274_31147519_31169442_31169602_31172347_31172414_31173538_31173605_31178668_31178806_31180369_31180482_31182737_31182905_31203960_31204119_31206581_31206668_31209497_31209700_31223046_31223122_31260954_31261017_31266809
H1_mix_00091176	chrX	-	573	4	FSM	ENSG00000198947.18	ENST00000682135.1	2405	4	0	1832	0	-1832	multi-exon	FALSE	canonical	0	0	junction_3	2.16024689946929	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAGACATTAACCATCTCT	0	True	NA	NA	False	GATAAA	-43	NA	32155469	31929595	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_31929746_31932079_31932228_31968338_31968515_32155370
H1_mix_00091177	chrX	-	6179	14	FSM	ENSG00000183337.18	ENST00000442018.6	6170	14	0	-9	0	0	multi-exon	FALSE	canonical	1	1	junction_1	51.7650586957568	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCTTGTGTCCCATGTAT	5611	False	NA	-2	True	AATAAA	-27	NA	40077929	40051245	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_40052401_40053837_40054043_40054255_40054334_40055367_40055514_40057154_40057322_40062138_40062394_40062745_40063072_40063607_40063953_40064335_40064600_40070972_40071160_40071636_40071691_40072348_40075181_40076453_40076533_40077843
H1_mix_00091179	chrX	-	6919	14	NIC	ENSG00000183337.18	novel	6910	15	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_10	49.3493763561969	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCTTGTGTCCCATGTAT	NA	False	NA	-2	True	AATAAA	-27	NA	40098016	40051245	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_40052401_40053885_40054043_40054255_40054334_40055367_40055514_40057154_40057322_40062138_40062394_40062745_40063072_40063607_40063953_40064335_40064600_40070972_40071160_40072348_40075181_40076453_40076533_40077843_40077970_40097214
H1_mix_00091180	chrX	-	554	2	Genic_Genomic	ENSG00000183337.18	novel	288	2	NA	NA	9	-66685	multi-exon	FALSE	canonical	1	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGCATGTGTCTTTGGT	9	True	NA	0	True	AATAAA	-21	NA	40146620	40144528	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chrX_-_40144907_40146444
H1_mix_00091181	chrX	-	1015	7	NIC	ENSG00000180182.11	novel	7996	31	NA	NA	103	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	159.596800998293	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACCAACTCTCTAGTTAAT	NA	False	NA	-13	True	AATAAA	-27	NA	40664348	40649542	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_40649673_40654363_40654557_40654934_40655061_40659226_40659335_40659427_40659608_40662924_40663161_40664306
H1_mix_00091182	chrX	-	938	2	Genic_Genomic	ENSG00000216866.5	novel	883	1	NA	NA	0	64546	multi-exon	FALSE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATTTCAGATATAGTTGA	NA	False	NA	NA	False	NA	NA	NA	40935864	40870435	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chrX_-_40870457_40934947
H1_mix_00091183	chrX	-	525	1	FSM	ENSG00000232801.1	ENST00000419629.1	891	1	349	17	349	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	1963	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCATTTCTGAGGTTTAA	NA	False	NA	NA	False	NA	NA	NA	40891188	40890663	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_40890700_40891200
H1_mix_00091186	chrX	-	238	2	FSM	ENSG00000251192.8	ENST00000453909.3	1609	2	759	612	759	-612	multi-exon	FALSE	canonical	3	12	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTCAGGCCAGGGAAAA	NA	False	NA	NA	False	NA	NA	NA	46528909	46528334	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_46528446_46528782
H1_mix_00091189	chrX	-	320	1	FSM	ENSG00000215284.2	ENST00000399931.2	655	1	69	266	69	-266	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACGAGACCAGCTAGAGG	5680	False	NA	NA	False	AATGAA	-40	NA	46725749	46725429	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_46725400_46725700
H1_mix_00091190	chrX	-	2278	2	Antisense	novelGene_ENSG00000102221.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAGAGAGAGAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	46928151	46923393	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chrX_-_46923664_46926143
H1_mix_00091191	chrX	-	397	4	Antisense	novelGene_ENSG00000188459.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	2.94392028877595	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCTAGGCAACGTCTGACG	NA	False	NA	NA	False	NA	NA	NA	47804655	47803357	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chrX_-_47803422_47803705_47803788_47803975_47804155_47804583
H1_mix_00091192	chrX	-	969	7	NNC	ENSG00000147118.12	novel	3586	7	NA	NA	0	-2654	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	19.5852835908325	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAGTATGAGAAAACAAATC	3	True	NA	NA	False	AATAAA	-36	NA	48003978	47977505	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_47977798_47982948_47983039_47983284_47983412_47988523_47988660_48002594_48002654_48003507_48003703_48003908
H1_mix_00091193	chrX	-	1891	16	NIC	ENSG00000017483.16	novel	2659	16	NA	NA	58	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_15	75.2238141961854	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGCCTTCTGATCTTTCT	1311	False	NA	-5	True	AATAAA	-23	NA	48468959	48458536	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_48459035_48459535_48459640_48459731_48459877_48460648_48460765_48460985_48461087_48461717_48461798_48462006_48462145_48462232_48462292_48462897_48462981_48466014_48466094_48466229_48466323_48466798_48466873_48466961_48467078_48467709_48467786_48467871_48467926_48468884
H1_mix_00091197	chrX	-	342	1	FSM	ENSG00000233585.2	ENST00000646565.1	500	1	-164	322	-164	27	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTATTCTACTTGGCCAG	NA	False	NA	NA	False	NA	NA	NA	48776307	48775965	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48776000_48776300
H1_mix_00091198	chrX	-	1528	6	FSM	ENSG00000126768.12	ENST00000466995.5	1528	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	427.411464516337	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGGACTCCTTGAAC	-4	True	NA	-3	True	TTTAAA	-18	NA	48897771	48893448	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48893818_48893899_48894226_48895037_48895102_48895351_48895973_48896758_48896859_48897723
H1_mix_00091199	chrX	-	939	7	FSM	ENSG00000126768.12	ENST00000495490.6	939	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	418.644538958769	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTATGTGTGGACTCCTT	0	True	NA	-7	True	TTTAAA	-14	NA	48897790	48893452	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48893818_48893899_48894011_48894096_48894226_48895037_48895102_48895351_48895455_48896758_48896859_48897723
H1_mix_00091200	chrX	-	2112	7	NNC	ENSG00000102096.9	novel	2075	6	NA	NA	0	14398	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	466.237689739186	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAATATCTATTCCCCCA	-1	True	NA	NA	False	AAAAAG	-2	NA	48919024	48898783	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_48898824_48913184_48914295_48914394_48914572_48915019_48915393_48917780_48917832_48918535_48918646_48918773
H1_mix_00091202	chrX	-	866	5	FSM	ENSG00000102100.16	ENST00000376529.8	865	5	0	-1	0	0	multi-exon	FALSE	canonical	2	8	junction_1	67.7140125823304	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACTTGGGTTGGGCAGCCT	0	True	NA	-4	True	AATAAA	-19	NA	48911646	48903182	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48903466_48904745_48904893_48906391_48906544_48909813_48909997_48911545
H1_mix_00091203	chrX	-	2881	10	NIC	ENSG00000068308.15	novel	2682	10	NA	NA	-36	-71	combination_of_known_junctions	FALSE	canonical	3	29	junction_8	138.425359840289	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTCTCATTGCCGCTGC	NA	False	NA	NA	False	NA	NA	NA	48958422	48923013	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_48923296_48923632_48923747_48923850_48924053_48925846_48926051_48934463_48934613_48934710_48934868_48934953_48935019_48936190_48936359_48944189_48944284_48956976
H1_mix_00091205	chrX	-	1453	1	FSM	ENSG00000223309.1	ENST00000411377.1	104	1	-811	-538	-811	538	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGGCCGCGCCTGCGCA	NA	False	NA	NA	False	NA	NA	NA	48960093	48958640	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48958600_48960100
H1_mix_00091206	chrX	-	3188	23	NIC	ENSG00000068400.13	novel	3031	26	NA	NA	0	1190	intron_retention	FALSE	canonical	3	229	junction_14	26.2826341812257	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCACCCACCCAGCCTGTC	2758	False	NA	NA	False	NA	NA	NA	48999504	48975065	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_48976112_48976240_48976364_48978304_48978436_48981214_48981315_48981415_48981473_48981595_48981692_48981794_48981873_48982978_48983093_48983227_48983441_48983774_48983871_48985267_48985403_48987784_48987878_48988120_48988199_48989610_48989711_48989834_48989883_48989971_48990004_48990684_48990733_48990925_48991111_48993427_48993579_48997249_48997358_48998153_48998181_48999237_48999300_48999437
H1_mix_00091211	chrX	-	1336	10	NIC	ENSG00000196998.19	novel	1444	11	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	2	6	junction_5	71.4631909049756	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCACTTCTTGATGACTG	0	True	NA	-5	True	AATAAA	-15	NA	49079898	49074642	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_49074913_49075135_49075282_49075363_49075466_49075544_49075754_49075865_49075979_49076429_49076525_49076644_49076751_49077836_49077912_49078040_49078113_49079750
H1_mix_00091212	chrX	-	2541	11	NIC	ENSG00000196998.19	novel	1745	11	NA	NA	-972	6	combination_of_known_junctions	FALSE	canonical	3	5	junction_10	61.3625292829427	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTCCCCCCAGCACTTCT	NA	False	NA	-14	True	AATAAA	-6	NA	49081228	49074651	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_49074913_49075135_49075282_49075363_49075466_49075544_49075754_49075865_49075946_49076429_49076525_49076644_49076751_49077642_49077748_49077836_49077912_49078040_49078113_49079938
H1_mix_00091213	chrX	-	1249	10	NIC	ENSG00000196998.19	novel	1381	11	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	2	6	junction_7	62.2244047236281	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTCTAAATAAAGAGCTC	220	False	NA	-33	True	GGGGCT	-27	NA	49079869	49074670	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_49074913_49075135_49075282_49075363_49075466_49075544_49075754_49075865_49075946_49076429_49076525_49076644_49076754_49077836_49077912_49078040_49078113_49079750
H1_mix_00091215	chrX	-	1681	12	NNC	ENSG00000068394.11	novel	1658	11	NA	NA	0	17647	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44.1404595047362	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGGGCACGGTGGCTCAC	-3	True	NA	NA	False	NA	NA	NA	49123735	49095759	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_49095785_49113408_49113756_49113852_49113939_49115725_49115796_49115890_49116015_49116220_49116324_49117029_49117163_49117596_49117811_49119704_49119815_49122397_49122523_49122621_49122777_49123546
H1_mix_00091218	chrX	-	540	3	FSM	ENSG00000012211.13	ENST00000611313.1	547	3	7	0	4	0	multi-exon	FALSE	canonical	3	89	junction_2	15.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGATGGAAGAGTGGTC	-19	True	NA	NA	False	GGGGCT	-42	NA	49186385	49183593	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_49183918_49184624_49184711_49186255
H1_mix_00091220	chrX	-	236	1	FSM	ENSG00000230216.1	ENST00000448722.1	546	1	-35	345	-35	-345	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGCGCTCAGCCGGCAGCT	NA	False	NA	NA	False	NA	NA	NA	49234536	49234300	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_49234300_49234500
H1_mix_00091221	chrX	-	504	5	FSM	ENSG00000049768.17	ENST00000652559.1	504	5	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_3	2.27760839478607	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAGAAGGTCTTCGAAGA	4436	False	NA	NA	False	NA	NA	NA	49264680	49256788	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_49256856_49256924_49257013_49257426_49257524_49258295_49258528_49264660
H1_mix_00091222	chrX	-	2516	14	NNC	ENSG00000187243.17	novel	2513	13	NA	NA	0	11923	intron_retention	FALSE	non_canonical	0	0	junction_1	410.259046465889	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAACAAACAAACCTGATG	57	False	NA	NA	False	AAAACA	-34	NA	52069172	52049903	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_52049921_52061829_52062039_52062233_52062665_52062986_52063102_52064046_52064110_52064500_52064544_52064628_52064709_52065329_52065422_52065809_52065890_52066082_52066147_52066249_52066454_52066864_52067699_52067962_52068204_52069129
H1_mix_00091223	chrX	-	2615	14	FSM	ENSG00000187243.17	ENST00000485287.5	2618	14	0	3	0	-3	multi-exon	FALSE	canonical	3	19	junction_3	565.600722696491	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTGGATGTTTCTTCCT	10	False	NA	NA	False	ATTAAA	-11	NA	52069219	52061829	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_52062039_52062233_52062665_52062986_52063102_52063702_52063751_52064046_52064110_52064500_52064544_52064628_52064709_52065329_52065422_52065809_52065890_52066082_52066147_52066249_52066454_52066864_52067699_52067962_52068225_52069129
H1_mix_00091226	chrX	-	1677	4	FSM	ENSG00000268350.8	ENST00000612846.5	1677	4	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_3	66.7449540331619	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTAGAATTCAGGTTT	808	False	NA	NA	False	AATAAA	-20	NA	52957659	52947253	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_52948706_52955153_52955247_52956272_52956347_52957601
H1_mix_00091227	chrX	-	2032	3	FSM	ENSG00000268350.8	ENST00000617970.4	2032	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	4	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTAGAATTCAGGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	52958501	52947253	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_52948706_52956272_52956756_52958404
H1_mix_00091228	chrX	-	595	1	FSM	ENSG00000270497.1	ENST00000605804.1	496	1	-224	125	-224	-125	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTCAAAACTACCAATTG	NA	False	NA	NA	False	AATAGA	-11	NA	53065772	53065177	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53065200_53065800
H1_mix_00091229	chrX	-	6626	26	NIC	ENSG00000126012.13	novel	5677	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	75	junction_22	34.1139267748525	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGTGTCTAGCTTCTT	9	True	NA	0	True	CATAAA	-21	NA	53225198	53191320	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_53193333_53193436_53193637_53193781_53193852_53194138_53194739_53194930_53195069_53195230_53195411_53195915_53196055_53196685_53197045_53197770_53197877_53198489_53198638_53198763_53198889_53198976_53199159_53201549_53201745_53201853_53201974_53210413_53210577_53210675_53210858_53211496_53211656_53211786_53211907_53214688_53214848_53215794_53215977_53216073_53216198_53217142_53217275_53217795_53217967_53218275_53218399_53220838_53220917_53224739
H1_mix_00091235	chrX	-	2860	2	ISM	ENSG00000124313.18	ENST00000640436.1	570	5	2712	-2220	1414	0	3prime_fragment	FALSE	canonical	3	14	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGCCTCTGCCTCCTA	NA	False	NA	-6	True	CATAAA	-15	NA	53236872	53232875	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_53235185_53236321
H1_mix_00091237	chrX	-	9826	25	FSM	ENSG00000072501.19	ENST00000675504.1	9826	25	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_24	97.5826483750512	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGTGTCTTTGTTCC	3	True	NA	-4	True	AATAAA	-14	NA	53422173	53374148	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53380187_53380619_53380731_53381017_53381088_53382231_53382384_53382505_53382661_53383096_53383254_53394777_53394889_53396226_53396381_53396471_53396618_53399588_53399731_53403565_53403673_53403776_53403894_53405011_53405150_53405244_53405392_53405492_53405673_53405770_53405957_53409061_53409270_53409420_53409504_53411760_53411902_53411994_53412254_53412899_53413139_53413231_53413436_53414757_53414871_53414980_53415170_53421894
H1_mix_00091238	chrX	-	9930	26	FSM	ENSG00000072501.19	ENST00000375340.10	9930	26	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_25	126.534573931396	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGTGTCTTTGTTCC	NA	False	NA	-4	True	AATAAA	-14	NA	53422728	53374148	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53380187_53380619_53380731_53381017_53381088_53382231_53382384_53382505_53382661_53383096_53383254_53394777_53394889_53396226_53396381_53396471_53396618_53399588_53399731_53403565_53403673_53403776_53403894_53405011_53405150_53405244_53405392_53405492_53405673_53405770_53405957_53409061_53409270_53409420_53409504_53411760_53411902_53411994_53412254_53412899_53413139_53413231_53413436_53414757_53414871_53414980_53415170_53421894_53422041_53422491
H1_mix_00091239	chrX	-	9395	23	NIC	ENSG00000072501.19	novel	9710	25	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_22	89.0508722654622	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGTGTCTTTGTTCC	26	False	NA	-4	True	AATAAA	-14	NA	53422641	53374148	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_53380187_53380619_53380731_53381017_53381088_53382231_53382384_53382505_53382661_53383096_53383254_53394777_53394889_53396226_53396381_53396471_53396618_53399588_53399731_53403565_53403673_53403776_53403894_53405011_53405150_53405244_53405392_53405492_53405673_53405770_53405957_53409061_53409270_53409420_53409504_53411760_53411902_53411994_53412254_53412899_53413139_53413231_53413436_53422491
H1_mix_00091241	chrX	-	13985	84	NNC	ENSG00000086758.16	novel	14731	84	NA	NA	0	-698	at_least_one_novel_splicesite	FALSE	canonical	2	28	junction_67	191.448904718764	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTTTTCACAATGGAGT	3	True	NA	-26	True	AATAAA	-16	NA	53686719	53532793	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_53533412_53534006_53534198_53534515_53534698_53535383_53535502_53536146_53536253_53536379_53536668_53537555_53537697_53538336_53538455_53538834_53539081_53539656_53539813_53542442_53542540_53543885_53543969_53544559_53544763_53545028_53545162_53546435_53546593_53546703_53546826_53547672_53548274_53548958_53549506_53550665_53550769_53550900_53551190_53551265_53551481_53552310_53552442_53552637_53552894_53554632_53554921_53557381_53557428_53558654_53558810_53558970_53559061_53559353_53559533_53560187_53560417_53561755_53561925_53562110_53562245_53562830_53562930_53563745_53563822_53564573_53564723_53565066_53565240_53568691_53568875_53569615_53569828_53573749_53573965_53575154_53575222_53575642_53575786_53576899_53577068_53580830_53581027_53583557_53583917_53584185_53584346_53585011_53585189_53586489_53586572_53586781_53586910_53588381_53588535_53589546_53589817_53590403_53590500_53590999_53591123_53592397_53592629_53593363_53593602_53594498_53594622_53595186_53595404_53600117_53600310_53602563_53602659_53603367_53603502_53604588_53604835_53607522_53607700_53608851_53608910_53614533_53614746_53615743_53615836_53616969_53617148_53617339_53617447_53624594_53624676_53625156_53625259_53627409_53627516_53627738_53627880_53628492_53628621_53628751_53628903_53629515_53629617_53630934_53631035_53631413_53631483_53631566_53631615_53632486_53632565_53634235_53634299_53645310_53645464_53647367_53647575_53648211_53648311_53654062_53654132_53680048_53680187_53686269_53686369_53686587
H1_mix_00091242	chrX	-	14393	85	NNC	ENSG00000086758.16	novel	14731	84	NA	NA	-46	-698	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_83	191.636405108838	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTTTTCACAATGGAGT	-18	True	NA	-26	True	AATAAA	-16	NA	53686774	53532793	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_53533412_53534006_53534198_53534515_53534698_53535383_53535502_53536146_53536253_53536379_53536668_53537555_53537697_53538336_53538455_53538834_53539081_53539656_53539813_53542442_53542540_53543840_53543969_53544559_53544763_53545028_53545162_53546435_53546593_53546703_53546826_53547672_53548274_53548958_53549506_53550665_53550769_53550900_53551190_53551313_53551481_53552310_53552442_53552637_53552894_53554632_53554921_53557381_53557428_53558654_53558810_53558970_53559061_53559353_53559533_53560187_53560417_53561755_53561925_53562110_53562245_53562830_53562930_53563745_53563822_53564573_53564723_53565066_53565240_53568691_53568875_53569615_53569828_53573749_53573965_53575154_53575222_53575642_53575789_53576899_53577068_53580830_53581027_53583557_53583917_53584185_53584346_53585011_53585189_53586489_53586572_53586781_53586910_53588381_53588535_53589546_53589817_53590403_53590500_53590999_53591123_53592397_53592629_53593363_53593602_53594498_53594622_53595186_53595404_53600117_53600310_53602563_53602659_53603367_53603502_53604588_53604835_53607522_53607700_53608851_53608910_53614533_53614746_53615743_53615836_53616969_53617148_53617339_53617447_53624594_53624676_53625156_53625259_53625785_53626035_53627409_53627516_53627738_53627880_53628492_53628621_53628751_53628903_53629515_53629617_53630934_53631035_53631413_53631483_53631566_53631615_53632486_53632565_53634235_53634299_53645310_53645464_53647367_53647575_53648211_53648311_53654062_53654132_53680048_53680187_53686165_53686369_53686587
H1_mix_00091245	chrX	-	11102	23	NNC	ENSG00000196632.11	novel	11172	23	NA	NA	-44	1	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_18	9.40953007319426	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATCTGGCTAAAACTGGT	-22	True	NA	-11	True	ATTAAA	-21	NA	54358049	54192823	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_54198654_54201990_54202194_54232808_54233021_54236937_54237552_54238341_54238473_54239008_54239100_54248696_54249635_54249993_54250132_54251398_54251451_54251531_54251688_54253958_54254076_54255739_54255888_54259273_54259339_54292887_54293038_54293133_54293328_54294552_54294848_54298174_54298395_54301770_54301860_54307921_54308080_54309094_54309316_54311118_54311292_54333136_54333793_54357798
H1_mix_00091246	chrX	-	1915	10	FSM	ENSG00000158578.21	ENST00000335854.8	1795	10	-86	-34	-86	0	multi-exon	FALSE	canonical	1	1	junction_6	1.33333333333333	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAAGCCTTTTATTGGAC	NA	False	NA	0	True	AATAAA	-16	NA	55031063	55009054	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_55009344_55013485_55013649_55014746_55015016_55015577_55015743_55017485_55017666_55020319_55020505_55021051_55021275_55024717_55024841_55025819_55026016_55030941
H1_mix_00091247	chrX	-	1067	4	FSM	ENSG00000182518.14	ENST00000332132.8	1067	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	121.194976060158	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGATCTGTGTCTCTCT	-19	True	NA	-5	True	AATAAA	-22	NA	55161195	55143101	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_55143876_55146180_55146312_55159125_55159229_55161136
H1_mix_00091248	chrX	-	659	3	NIC	ENSG00000182518.14	novel	1170	3	NA	NA	7	40	combination_of_known_junctions	FALSE	canonical	3	51	junction_2	2.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTATTTTTATTTTAC	12	True	NA	-26	True	AATAAA	-16	NA	55161112	55145897	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_55146312_55159121_55159229_55160974
H1_mix_00091249	chrX	-	555	3	FSM	ENSG00000182518.14	ENST00000685693.1	3359	3	8	2796	5	40	multi-exon	FALSE	canonical	3	272	junction_2	5.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTATTTTTATTTTAC	-1	True	NA	-26	True	AATAAA	-16	NA	55161177	55145897	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_55146312_55159128_55159229_55161136
H1_mix_00091250	chrX	-	227	1	FSM	ENSG00000237748.1	ENST00000421129.1	336	1	229	-120	229	120	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGTTATTCCAAACCTTA	236	False	NA	NA	False	AATAAA	-17	NA	56737348	56737121	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_56737100_56737300
H1_mix_00091257	chrX	-	1035	2	Intergenic	novelGene_1669	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTCCTACATTAGCTTG	6920	False	NA	NA	False	NA	NA	NA	57114596	57112004	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_57112783_57114339
H1_mix_00091259	chrX	-	1164	2	FSM	ENSG00000186787.10	ENST00000275988.5	1152	2	0	-12	0	12	multi-exon	FALSE	canonical	3	8	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCTTTGTCTTGTTGAA	25	True	NA	9	True	AATACA	-30	NA	57121491	57119669	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_57120635_57121292
H1_mix_00091260	chrX	-	647	1	FSM	ENSG00000198205.7	ENST00000358697.6	5029	1	1573	2809	1573	-2809	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACACAGATACTCTGACT	1618	False	NA	NA	False	NA	NA	NA	57908885	57908238	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_57908200_57908900
H1_mix_00091261	chrX	-	1062	4	FSM	ENSG00000235437.9	ENST00000665831.1	980	4	-3	-79	1	79	multi-exon	FALSE	canonical	3	42	junction_1	5.73488351136175	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCCATTTTATGAAAATAA	-23	True	NA	78	True	TATAAA	-2	NA	63561074	63426478	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_63426997_63432363_63432492_63516909_63517083_63560831
H1_mix_00091266	chrX	-	1402	9	NIC	ENSG00000131089.17	novel	4702	10	NA	NA	35	-73	combination_of_known_junctions	FALSE	canonical	3	15	junction_3	50.5085079466816	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACCGAACCCAAGCGCAG	8	True	NA	NA	False	NA	NA	NA	63785179	63638099	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_63638210_63643979_63644049_63655493_63655738_63674037_63674168_63678339_63678573_63697124_63697305_63706257_63706450_63724531_63724712_63785115
H1_mix_00091269	chrX	-	1364	4	Fusion	ENSG00000102043.16_ENSG00000198881.10	novel	1267	3	NA	NA	16269	-3	multi-exon	FALSE	canonical	1	1	junction_2	1.24721912892465	721	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTCCCAGTGTCTGCTGT	NA	False	NA	NA	False	AATAAA	-14	NA	64328889	64224196	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chrX_-_64224469_64224827_64225675_64270946_64271074_64328771
H1_mix_00091270	chrX	-	1609	11	ISM	ENSG00000102043.16	ENST00000374852.4	2660	14	-32	63340	-32	1	5prime_fragment	FALSE	canonical	3	25	junction_5	7.53923072998831	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCACTCAATGTTTGCA	NA	False	NA	NA	False	AATAAA	-17	NA	64395484	64331420	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_64331758_64336078_64336129_64337267_64337394_64343610_64343721_64345044_64345178_64348659_64348795_64349941_64350071_64354776_64354935_64356175_64356339_64359404_64359528_64395339
H1_mix_00091273	chrX	-	2409	14	NNC	ENSG00000001497.18	novel	2386	13	NA	NA	0	-2122	intron_retention	FALSE	non_canonical	0	0	junction_1	215.143298880663	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAAAGCTGAGCAGTTTTA	12	True	NA	NA	False	NA	NA	NA	65534754	65501239	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_65501265_65512583_65512902_65514822_65514974_65517986_65518466_65523559_65523708_65524055_65524263_65524964_65525051_65528259_65528370_65529211_65529259_65529593_65529879_65531356_65531439_65532560_65532631_65533609_65533736_65534479
H1_mix_00091275	chrX	-	1326	8	FSM	ENSG00000001497.18	ENST00000678602.1	1326	8	0	0	0	0	multi-exon	FALSE	canonical	3	754	junction_4	29.8609020189906	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGTGGGGTGGGATGGGG	-32	True	NA	NA	False	GGGGCT	-20	NA	65534798	65524763	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_65525051_65528259_65528370_65529211_65529259_65529593_65529879_65531356_65531439_65532560_65532631_65533609_65533736_65534479
H1_mix_00091276	chrX	-	839	1	FSM	ENSG00000217835.3	ENST00000456392.1	908	1	173	-104	173	104	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTTAAAATTCCCTGTT	NA	False	NA	NA	False	ACTAAA	-18	NA	65957023	65956184	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_65956200_65957000
H1_mix_00091277	chrX	-	3455	7	FSM	ENSG00000131080.15	ENST00000374719.8	3455	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	9.4457515435365	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTTTATTCCTCTACTT	-4	True	NA	-16	True	AATAAA	-19	NA	66639078	66595636	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_66598094_66599473_66599861_66602632_66602798_66604420_66604507_66605047_66605227_66615933_66616031_66638994
H1_mix_00091278	chrX	-	3314	24	FSM	ENSG00000079482.14	ENST00000679748.1	3314	24	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_4	2.39248982473002	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACTGCTGCTTCATGTTT	-7	True	NA	NA	False	NA	NA	NA	68433495	68046274	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_68047164_68048415_68048458_68052539_68052591_68053644_68053811_68073151_68073300_68096869_68097030_68111853_68111960_68113180_68113240_68119247_68119333_68192918_68192994_68193889_68193953_68194464_68194499_68197185_68197265_68201618_68201711_68206572_68206674_68210152_68210283_68212107_68212213_68213861_68213973_68234486_68234589_68274737_68274810_68283055_68283118_68299000_68299097_68432866_68433025_68433167
H1_mix_00091281	chrX	-	1026	9	NNC	ENSG00000120509.11	novel	991	7	NA	NA	0	13380	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	156.936641276026	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATCCTTTCGGAAACTTC	7	True	NA	NA	False	NA	NA	NA	70289913	70273214	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_70273240_70275659_70275684_70286594_70287117_70287275_70287337_70287731_70287831_70288116_70288174_70288429_70288514_70289254_70289355_70289859
H1_mix_00091282	chrX	-	1188	7	NIC	ENSG00000120509.11	novel	991	7	NA	NA	28	0	intron_retention	FALSE	canonical	3	65	junction_6	115.560469980968	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGTGTGACTTTTGAAT	35	False	NA	-23	True	AGTAAA	-18	NA	70289885	70286594	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_70287117_70287275_70287337_70287731_70287831_70288116_70288174_70288429_70288514_70289254_70289594_70289859
H1_mix_00091283	chrX	-	2236	13	NNC	ENSG00000165349.12	novel	2239	12	NA	NA	0	21599	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	225.167144707117	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGATGTGGTGTTGCATG	-1	True	NA	NA	False	NA	NA	NA	70931096	70903979	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_70904005_70925582_70925944_70926069_70926179_70926526_70926694_70926874_70927042_70927281_70927385_70927483_70927624_70927797_70928021_70928144_70928258_70928455_70928634_70928843_70929003_70929627_70929999_70930976
H1_mix_00091285	chrX	-	5530	25	NIC	ENSG00000147130.14	novel	6021	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	9	junction_24	44.2269831852306	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGTCTTTTCTGGGTG	702	False	NA	-9	True	AATAAA	-13	NA	71254575	71239625	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_71241109_71241226_71241345_71242169_71242425_71242969_71243085_71243828_71243981_71244301_71244471_71244789_71244894_71245338_71245486_71245667_71245843_71245985_71246099_71246352_71246513_71246594_71246693_71247344_71247511_71247733_71247907_71248161_71248313_71248437_71248525_71248685_71248802_71249018_71249170_71249460_71249680_71250025_71250204_71250431_71250727_71251177_71251245_71251557_71251602_71252588_71253275_71254467
H1_mix_00091286	chrX	-	5877	25	FSM	ENSG00000147130.14	ENST00000373998.5	6067	25	188	2	102	0	multi-exon	FALSE	canonical	1	9	junction_24	48.6235361104979	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGTCTTTTCTGGGTG	319	False	NA	-9	True	AATAAA	-13	NA	71254958	71239625	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_71241109_71241226_71241345_71242169_71242425_71242969_71243085_71243828_71243981_71244301_71244471_71244789_71244894_71245338_71245486_71245667_71245843_71245985_71246099_71246352_71246513_71246630_71246693_71247344_71247511_71247733_71247907_71248161_71248313_71248437_71248525_71248685_71248802_71249018_71249170_71249460_71249680_71250025_71250204_71250431_71250727_71251177_71251245_71251557_71251602_71252588_71253275_71254467
H1_mix_00091287	chrX	-	1841	7	FSM	ENSG00000147130.14	ENST00000373981.5	1841	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_6	47.9826357480843	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGCCTCAGCCTCTCCTT	702	False	NA	-3	True	AATAAA	-15	NA	71254575	71249203	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_71249680_71250025_71250204_71250431_71250727_71251177_71251245_71251557_71251602_71252588_71253275_71254480
H1_mix_00091288	chrX	-	809	1	FSM	ENSG00000213018.2	ENST00000391782.2	432	1	-269	-108	-269	108	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTATTTTTTTAAAAAG	NA	False	NA	NA	False	ATTAAA	-41	NA	71420783	71419974	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_71420000_71420800
H1_mix_00091289	chrX	-	489	6	NNC	ENSG00000283178.1	novel	1552	5	NA	NA	1668	235	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	7.87400787401181	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCATATTCTGTGGTCTGT	1849	False	NA	NA	False	AATAAA	-6	NA	71871627	71869527	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_71869656_71869761_71869804_71870355_71870402_71870681_71870759_71871317_71871475_71871588
H1_mix_00091290	chrX	-	1820	5	FSM	ENSG00000198034.11	ENST00000486733.2	1820	5	0	0	0	0	multi-exon	FALSE	canonical	3	11973	junction_3	882.748937977271	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGAGACAAAAGACTGGC	-9	True	NA	-140	True	NA	NA	NA	72276227	72272712	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_72272773_72273231_72273390_72273800_72275151_72275543_72275725_72276156
H1_mix_00091291	chrX	-	594	5	FSM	ENSG00000198034.11	ENST00000373626.4	594	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	5232.21028820517	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTAAGATAAAGTTGAGTT	7	True	NA	NA	False	NA	NA	NA	72277248	72274254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_72274436_72275052_72275151_72275543_72275725_72276156_72276235_72277192
H1_mix_00091292	chrX	-	639	2	ISM	ENSG00000125931.11	ENST00000427412.5	666	3	2629	-235	-68	-83	3prime_fragment	FALSE	canonical	3	12	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTGCTAATGCCAAGTGT	4221	False	NA	-96	True	NA	NA	NA	72302936	72301732	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_72302245_72302809
H1_mix_00091294	chrX	-	1708	11	FSM	ENSG00000147099.21	ENST00000647980.1	1700	11	0	-8	0	0	multi-exon	FALSE	canonical	0	0	junction_5	66.183457147538	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATATATCTTTGGTTTT	-15	True	NA	-45	True	NA	NA	NA	72572847	72329559	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_72330077_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491001_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
H1_mix_00091298	chrX	-	2099	8	FSM	ENSG00000147099.21	ENST00000439122.7	2373	8	274	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	72.9475629392477	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTGTCATCATTATTAT	23	True	NA	-1	True	AATAAA	-18	NA	72572809	72473415	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_72474730_72488932_72489042_72490928_72491007_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
H1_mix_00091304	chrX	-	838	4	FSM	ENSG00000147099.21	ENST00000373554.6	836	4	0	-2	0	2	multi-exon	FALSE	canonical	3	175	junction_1	12.7104506432917	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTCTAAATTCCTTTTC	-21	True	NA	3	True	AATAAA	-23	NA	72572853	72567579	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_72568031_72568753_72568885_72572056_72572110_72572650
H1_mix_00091305	chrX	-	6122	31	FSM	ENSG00000067177.15	ENST00000339490.7	6121	31	0	-1	0	0	multi-exon	TRUE	canonical	3	25	junction_18	7.47261667690776	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTTTTTGTGATTGGA	124	False	NA	-1	True	ATTAAA	-31	NA	72714181	72578813	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_72581176_72582397_72582599_72584248_72584303_72593103_72593275_72602157_72602274_72603118_72603221_72605270_72605401_72605540_72605620_72609623_72609704_72611027_72611185_72618709_72618850_72619213_72619306_72620724_72620902_72623108_72623276_72626970_72627050_72635154_72635300_72636276_72636387_72644361_72644497_72650389_72650469_72652543_72652652_72653434_72653531_72656119_72656243_72657587_72657642_72666150_72666298_72667374_72667474_72676069_72676151_72684497_72684581_72695707_72695877_72705197_72705246_72712778_72712938_72713802
H1_mix_00091307	chrX	-	6099	32	NNC	ENSG00000067177.15	novel	6286	32	NA	NA	22	-16	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_31	8.70609245216475	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGTGCAAAACTTCACAT	21	True	NA	-18	True	AATAAA	-35	NA	72714284	72578830	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_72581176_72582397_72582599_72584248_72584303_72593103_72593275_72602157_72602274_72603118_72603221_72605270_72605401_72605540_72605620_72609623_72609704_72611027_72611185_72618709_72618850_72619213_72619306_72620724_72620902_72623108_72623276_72626970_72627050_72635154_72635300_72636276_72636387_72644361_72644497_72650389_72650469_72652543_72652652_72653434_72653531_72656119_72656243_72657587_72657642_72666150_72666298_72667374_72667474_72676069_72676151_72684497_72684581_72695707_72695877_72705197_72705246_72712778_72712938_72713802_72713942_72714050
H1_mix_00091309	chrX	-	2237	1	FSM	ENSG00000186288.5	ENST00000373519.1	2237	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTCTGGCTCTTAATAT	NA	False	NA	NA	False	ATTAAA	-16	NA	73079512	73077275	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_73077300_73079500
H1_mix_00091310	chrX	-	8242	6	FSM	ENSG00000230590.12	ENST00000665069.1	1958	6	16	-6300	7	0	multi-exon	TRUE	canonical	3	9	junction_1	23.7284639199422	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGTTTATTTTCTTATTG	1213	False	NA	NA	False	AATAAA	-24	NA	74292335	74196350	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_74203954_74274341_74274411_74280393_74280495_74280930_74281086_74281701_74281849_74292168
H1_mix_00091311	chrX	-	1898	6	FSM	ENSG00000230590.12	ENST00000687056.1	3054	6	3	1153	-1	0	multi-exon	FALSE	canonical	3	17	junction_1	19.1582880237249	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAACCACTGATTTATGTT	3	True	NA	NA	False	AATAAA	-44	NA	74292589	74202646	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_74203910_74274341_74274411_74280393_74280495_74280930_74281086_74281701_74281849_74292426
H1_mix_00091316	chrX	-	4696	16	FSM	ENSG00000131269.19	ENST00000373394.8	4592	16	0	-104	0	104	multi-exon	FALSE	canonical	3	115	junction_15	38.1216765400241	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATACTGAAGTAACCATC	0	True	NA	97	True	CATAAA	-8	NA	75156283	75050943	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_75053586_75060222_75060331_75062327_75062432_75065069_75065242_75069006_75069137_75069290_75069455_75070364_75070523_75071508_75071684_75073688_75073777_75073867_75073957_75075361_75075631_75076521_75076655_75098941_75099062_75112885_75112973_75114753_75114832_75156104
H1_mix_00091317	chrX	-	4836	1	FSM	ENSG00000232186.1	ENST00000432946.1	1228	1	-1303	-2305	-1303	2305	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCTGTTGGAACTTTTTG	NA	False	NA	NA	False	NA	NA	NA	75329302	75324466	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_75324500_75329300
H1_mix_00091318	chrX	-	6011	11	FSM	ENSG00000102383.14	ENST00000541184.1	6012	11	0	1	0	-1	multi-exon	FALSE	canonical	3	12	junction_10	9.50578771065291	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATTGTTGGTTTTTTTT	59	False	NA	-5	True	ATTAAA	-11	NA	75523502	75368431	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_75372946_75379119_75379199_75417086_75417191_75421863_75421991_75424651_75424785_75429077_75429199_75429947_75429981_75431450_75431521_75450801_75450923_75478890_75478986_75522888
H1_mix_00091319	chrX	-	8221	1	FSM	ENSG00000215105.4	ENST00000399586.2	6081	1	-224	-1916	-224	1916	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTTTGCTGATGTGTGC	16	True	NA	NA	False	AAGAAA	-45	NA	75747135	75738914	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_75738900_75747100
H1_mix_00091322	chrX	-	3384	12	NNC	ENSG00000102158.22	novel	3407	11	NA	NA	0	46655	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	82.342361289982	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGGCATGGTGGCGGGCG	14	True	NA	NA	False	AATACA	-25	NA	77895424	77779091	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_77779118_77826367_77828038_77828553_77829236_77830804_77830896_77841245_77841321_77853900_77853965_77855500_77855591_77856732_77856874_77857356_77857498_77870807_77870926_77875427_77875598_77895308
H1_mix_00091323	chrX	-	3784	9	FSM	ENSG00000102158.22	ENST00000689519.1	2729	9	16	-1071	3	0	multi-exon	FALSE	canonical	2	3	junction_1	70.7067005311378	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGTTTTTGATTACCA	17	True	NA	0	True	AATAAA	-16	NA	77895421	77826363	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_77829236_77841245_77841321_77853900_77853965_77855500_77855591_77856732_77856874_77857356_77857498_77870807_77870926_77875427_77875598_77895308
H1_mix_00091326	chrX	-	734	6	FSM	ENSG00000187325.5	ENST00000480681.1	734	6	0	0	0	0	multi-exon	FALSE	canonical	3	523	junction_1	62.4819974072532	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAAAATATTCTTATTAC	14	True	NA	NA	False	NA	NA	NA	78139622	78131720	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_78131774_78133337_78133449_78136914_78136991_78137748_78138099_78138842_78138925_78139560
H1_mix_00091327	chrX	-	2829	25	FSM	ENSG00000165288.11	ENST00000473691.1	2829	25	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	13.3103317222207	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAACAAAAGAGAA	NA	False	NA	NA	False	GATAAA	-4	NA	80722573	80677244	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_80677364_80681340_80681500_80681996_80682095_80682464_80682629_80684089_80684163_80685461_80685537_80686862_80687004_80688068_80688126_80689767_80689847_80689966_80690093_80691052_80691174_80691822_80691979_80692088_80692151_80692939_80693052_80695907_80695991_80696738_80696864_80699956_80700065_80703479_80703594_80704677_80704847_80707426_80707504_80709427_80709578_80716156_80716251_80717572_80717760_80719488_80719657_80722561
H1_mix_00091328	chrX	-	2039	8	NIC	ENSG00000198157.11	novel	859	9	NA	NA	6	-207	combination_of_known_junctions	FALSE	canonical	1	4	junction_6	152.425023388885	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTGTCAGTATATTCACAA	35	False	NA	-18	True	AATAAA	-21	NA	81201880	81113905	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_81115231_81116203_81116342_81118431_81118486_81118729_81118760_81119787_81119818_81121534_81121673_81195117_81195298_81201736
H1_mix_00091330	chrX	-	254	1	FSM	ENSG00000215102.2	ENST00000399580.2	1115	1	858	3	858	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCTGATTGTGTTTGTA	129	False	NA	NA	False	AGTAAA	-20	NA	83749081	83748827	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_83748800_83749100
H1_mix_00091331	chrX	-	292	1	FSM	ENSG00000215102.2	ENST00000399580.2	1115	1	105	718	105	-718	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTGGTGATCCAAATT	NA	False	NA	NA	False	TTTAAA	-24	NA	83749834	83749542	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_83749500_83749800
H1_mix_00091332	chrX	-	8168	22	FSM	ENSG00000072133.11	ENST00000620340.4	8169	22	0	1	0	-1	multi-exon	TRUE	canonical	3	20	junction_21	15.7317363423327	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCGTTGACCTCGCTTGA	2346	False	NA	-8	True	AATAAA	-24	NA	84186141	84058346	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_84064403_84064970_84065112_84096193_84096312_84097771_84097849_84102036_84102199_84104498_84104658_84105786_84105877_84106364_84106488_84106909_84107041_84107622_84107726_84116228_84116288_84117059_84117149_84117383_84117455_84119884_84120028_84134781_84134820_84135103_84135211_84145477_84145558_84146977_84147059_84148041_84148124_84156074_84156192_84164327_84164388_84186060
H1_mix_00091333	chrX	-	475	3	FSM	ENSG00000165259.14	ENST00000465509.3	475	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	6.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATACTTCTCTTTGGTGAC	6	True	NA	NA	False	AATAAA	-17	NA	84502453	84500024	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_84500305_84501428_84501512_84502341
H1_mix_00091334	chrX	-	2814	5	FSM	ENSG00000188419.14	ENST00000615443.1	2821	5	0	7	0	-7	multi-exon	FALSE	canonical	2	6	junction_1	25.2326673183792	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAAATTCTACTGATTTA	7	True	NA	NA	False	AATAAA	-20	NA	86047539	85969093	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_85971587_85978766_85978892_85981736_85981810_86027490_86027558_86047483
H1_mix_00091336	chrX	-	745	1	FSM	ENSG00000225536.2	ENST00000394563.4	1624	1	725	154	725	-154	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCGAGGTGCAGCAGATCA	NA	False	NA	NA	False	NA	NA	NA	86085614	86084869	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_86084900_86085600
H1_mix_00091337	chrX	-	386	1	FSM	ENSG00000227581.2	ENST00000453704.2	622	1	232	4	232	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATGAATTAAAAGCAAAAAC	NA	False	NA	NA	False	AAAACA	-36	NA	90039602	90039216	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_90039200_90039600
H1_mix_00091338	chrX	-	283	1	Intergenic	novelGene_1681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGTCACGGACTGGGAAG	NA	False	NA	NA	False	NA	NA	NA	90778668	90778385	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_90778400_90778700
H1_mix_00091339	chrX	-	1025	3	NNC	ENSG00000289479.1	novel	1764	2	NA	NA	-773	951	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	645.5	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTCTCACAGTTTCTG	-2	False	NA	NA	False	AATAAA	-14	NA	92105541	92099324	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_92099588_92100187_92100701_92105292
H1_mix_00091340	chrX	-	1990	3	NNC	ENSG00000289479.1	novel	1764	2	NA	NA	-586	1244	at_least_one_novel_splicesite	FALSE	canonical	3	211	junction_2	216.5	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCAGTATGGCATGTCAT	185	False	NA	NA	False	AATAGA	-40	NA	92105354	92099031	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_92100701_92103446_92103706_92105292
H1_mix_00091341	chrX	-	2608	2	NNC	ENSG00000289479.1	novel	1764	2	NA	NA	-586	2121	at_least_one_novel_splicesite	FALSE	canonical	3	1315	junction_1	0	67	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATAAGATATCGTCTGCT	185	False	NA	NA	False	AATAAA	-18	NA	92105354	92098154	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_92100701_92105292
H1_mix_00091342	chrX	-	201	2	Intergenic	novelGene_1682	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	206	junction_1	0	286	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGCAGGGCATATTCACT	NA	False	NA	NA	False	NA	NA	NA	92829210	92824542	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_92824613_92829079
H1_mix_00091343	chrX	-	988	1	FSM	ENSG00000232842.2	ENST00000444292.2	988	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGACCTGTCATTCCGAGC	28	False	NA	NA	False	NA	NA	NA	95974315	95973327	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_95973300_95974300
H1_mix_00091344	chrX	-	2069	9	NNC	ENSG00000000003.15	novel	3768	8	NA	NA	0	82281	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	374.698128498128	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAGAAAGAAAGAAAGA	3301	False	NA	NA	False	NA	NA	NA	100636689	100544826	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_100544853_100628715_100629987_100630758_100630867_100632484_100632569_100633404_100633540_100633930_100634030_100635177_100635253_100635557_100635747_100636607
H1_mix_00091345	chrX	-	3749	8	NIC	ENSG00000000003.15	novel	3768	8	NA	NA	-86	80	combination_of_known_junctions	FALSE	canonical	3	99	junction_7	365.895937029497	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGGTGATGCACCCAAAC	3098	False	NA	47	True	NA	NA	NA	100636892	100627027	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_100629987_100630758_100630867_100632484_100632569_100633404_100633540_100633930_100634030_100635177_100635253_100635557_100635747_100636792
H1_mix_00091346	chrX	-	2300	6	FSM	ENSG00000000003.15	ENST00000496771.5	1025	6	-204	-1071	-87	593	multi-exon	FALSE	canonical	3	48	junction_5	428.977202191445	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATTCAAGTTTCGTCTTA	3097	False	NA	NA	False	ATTAAA	-15	NA	100636893	100631469	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_100632569_100633404_100633540_100633930_100634030_100635177_100635253_100635557_100635747_100636190
H1_mix_00091349	chrX	-	306	1	FSM	ENSG00000270813.2	ENST00000603059.2	565	1	304	-45	304	45	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATCAGCCATTGTGCCTG	NA	False	NA	NA	False	NA	NA	NA	101337985	101337679	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101337700_101338000
H1_mix_00091350	chrX	-	357	3	FSM	ENSG00000010671.17	ENST00000464567.1	587	3	0	230	0	-230	multi-exon	FALSE	canonical	2	3	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAAGAGACCAATGTCT	9302	False	NA	NA	False	NA	NA	NA	101386148	101374535	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101374635_101375143_101375315_101386061
H1_mix_00091353	chrX	-	2151	4	FSM	ENSG00000102393.14	ENST00000468823.2	3748	4	0	1597	0	-90	multi-exon	FALSE	canonical	3	232	junction_1	37.7094152699296	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAATAAGAGTATATATTT	-5	True	NA	NA	False	NA	NA	NA	101407964	101398369	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101398947_101400665_101401810_101403810_101403986_101407709
H1_mix_00091354	chrX	-	542	5	FSM	ENSG00000198960.11	ENST00000462302.5	542	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	69.6971125657297	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTCTGCAGGCAATGTT	53	False	NA	NA	False	GGGGCT	-31	NA	101617913	101615512	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101615761_101616671_101616767_101617282_101617371_101617502_101617585_101617884
H1_mix_00091355	chrX	-	753	2	FSM	ENSG00000198960.11	ENST00000494624.1	753	2	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATCTGCCTTTATCACCA	52	False	NA	NA	False	AAGAAA	-23	NA	101617914	101616861	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101617585_101617884
H1_mix_00091357	chrX	-	612	6	FSM	ENSG00000184867.14	ENST00000479333.5	612	6	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	95.8507172638786	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACAAATACACCAGGGGGA	13	False	NA	NA	False	GGGGCT	-18	NA	101659836	101657517	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101657716_101658072_101658143_101658460_101658570_101659075_101659149_101659418_101659502_101659757
H1_mix_00091358	chrX	-	464	5	NIC	ENSG00000184867.14	novel	612	6	NA	NA	0	-65	combination_of_known_junctions	FALSE	canonical	3	27	junction_4	129.837157624464	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGTTCGGGATGCTGGCTG	13	False	NA	NA	False	NA	NA	NA	101659836	101657582	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_101657716_101658072_101658143_101658460_101658570_101659075_101659149_101659757
H1_mix_00091359	chrX	-	1576	1	FSM	ENSG00000178146.9	ENST00000328462.7	1570	1	71	-77	71	77	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTATTCCATAAAACCTAC	188	False	NA	NA	False	NA	NA	NA	101780467	101778891	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101778900_101780500
H1_mix_00091360	chrX	-	1138	2	FSM	ENSG00000180964.17	ENST00000360000.8	1131	2	0	-7	0	7	multi-exon	FALSE	canonical	3	483	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGACTCAGTCTTTTCAT	17	False	103255193	NA	False	AATAAA	-27	NA	103255185	103252987	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_103254018_103255077
H1_mix_00091361	chrX	-	2974	3	NNC	ENSG00000123562.18	novel	1866	4	NA	NA	5620	6908	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1026	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTGTTTCTCCTTCAG	8216	False	NA	NA	False	AAAAAG	-9	NA	103679885	103668587	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_103668621_103675497_103677052_103678498
H1_mix_00091362	chrX	-	1954	6	NNC	ENSG00000123562.18	novel	869	5	NA	NA	0	6908	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	862.027006537498	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTGTTTCTCCTTCAG	2	True	NA	NA	False	AAAAAG	-9	NA	103686705	103668587	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_103668621_103675497_103677052_103678498_103678652_103684680_103684730_103685170_103685261_103686630
H1_mix_00091363	chrX	-	1867	6	NNC	ENSG00000123562.18	novel	849	5	NA	NA	0	6908	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	734.303098182215	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTGTTTCTCCTTCAG	74	False	NA	NA	False	AAAAAG	-9	NA	103688027	103668587	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_103668621_103675497_103677052_103678498_103678601_103684680_103684730_103685170_103685261_103687988
H1_mix_00091364	chrX	-	1864	5	NIC	ENSG00000123562.18	novel	869	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	272	junction_2	785.337944772822	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTTGTAGTGTGCCTTT	8	True	NA	-5	True	AATAAA	-25	NA	103686699	103675497	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_103677052_103678498_103678601_103684680_103684730_103685170_103685261_103686630
H1_mix_00091365	chrX	-	1913	5	FSM	ENSG00000123562.18	ENST00000442614.5	869	5	10	-1054	0	0	multi-exon	FALSE	canonical	3	222	junction_2	800.464357420116	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAATTTGTAGTGTGCCT	8	True	NA	-7	True	AATAAA	-23	NA	103686699	103675499	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_103677052_103678498_103678652_103684680_103684730_103685170_103685261_103686630
H1_mix_00091366	chrX	-	2150	4	NIC	ENSG00000123562.18	novel	562	5	NA	NA	-198	0	combination_of_known_splicesites	FALSE	canonical	3	77	junction_2	902.368365284747	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAATTTGTAGTGTGCCT	1085	False	NA	-7	True	AATAAA	-23	NA	103687016	103675499	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_103677052_103678498_103678621_103685170_103685261_103686630
H1_mix_00091367	chrX	-	410	2	FSM	ENSG00000231728.5	ENST00000674336.1	576	2	23	143	23	-143	multi-exon	FALSE	canonical	1	3	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAAAACAGCTTACTGCT	NA	False	NA	NA	False	NA	NA	NA	103919170	103845293	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_103845365_103918831
H1_mix_00091368	chrX	-	496	1	FSM	ENSG00000235946.1	ENST00000441761.1	496	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATCTCAGGAGCGCCCGA	NA	False	NA	NA	False	NA	NA	NA	104063037	104062541	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_104062500_104063000
H1_mix_00091369	chrX	-	6948	7	ISM	ENSG00000089682.17	ENST00000685964.1	7005	8	2056	0	0	0	3prime_fragment	FALSE	canonical	0	0	junction_3	30.7571129984594	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGAGAGACGGTCATTTC	2043	False	NA	NA	False	AATAAA	-27	NA	107116766	107061884	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_107067694_107069254_107069403_107088435_107088840_107113396_107113469_107115351_107115557_107115861_107116055_107116649
H1_mix_00091371	chrX	-	7005	8	FSM	ENSG00000089682.17	ENST00000685964.1	7005	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	28.6128271506159	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGAGAGACGGTCATTTC	-13	True	NA	NA	False	AATAAA	-27	NA	107118822	107061884	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_107067694_107069254_107069403_107088435_107088840_107113396_107113469_107115351_107115557_107115861_107116055_107116649_107116767_107118765
H1_mix_00091372	chrX	-	1662	7	FSM	ENSG00000089682.17	ENST00000372479.7	1662	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	16.709943812659	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTTTACTAGAGCCCA	5	True	NA	-14	True	AATAAA	-21	NA	107118804	107067137	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_107067694_107069254_107069403_107088435_107088840_107115351_107115557_107115861_107116055_107116649_107116767_107118765
H1_mix_00091373	chrX	-	925	5	FSM	ENSG00000089682.17	ENST00000485676.5	925	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	32.4692161901084	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGATGAAATCCAGAGAAA	2041	False	NA	NA	False	AATAGA	-11	NA	107116768	107088525	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_107088840_107115351_107115557_107115861_107116055_107116150_107116245_107116649
H1_mix_00091374	chrX	-	1755	9	FSM	ENSG00000198088.10	ENST00000372466.8	1755	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	11.3074919854051	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTCAGTAACCTATAATTTA	2	True	NA	-4	True	ATTAAA	-19	NA	107206433	107123426	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_107124333_107147742_107147810_107153171_107153307_107153453_107153504_107154095_107154247_107167648_107167785_107175088_107175194_107193028_107193073_107206272
H1_mix_00091376	chrX	-	4510	41	NNC	ENSG00000197565.17	novel	865	6	NA	NA	3	-2645	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	36.8393811022932	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCATCCTTTCCCACCCT	5	True	NA	NA	False	AATAAA	-10	NA	108438427	108164275	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_108164486_108164599_108164699_108164876_108165039_108165369_108165487_108169494_108169621_108169944_108170017_108170608_108170717_108170809_108170918_108171386_108171462_108172468_108172533_108174439_108174622_108175089_108175216_108175653_108175798_108176840_108177012_108178683_108178846_108179216_108179439_108180514_108180623_108180896_108180969_108187095_108187280_108187847_108188028_108188516_108188678_108190391_108190497_108191392_108191534_108192472_108192581_108193627_108193698_108194533_108194588_108195081_108195127_108196510_108196580_108202927_108202982_108204319_108204413_108205438_108205481_108205659_108205696_108206517_108206581_108209968_108210005_108211671_108211741_108214111_108214229_108219697_108219743_108221239_108221375_108310747_108310829_108437941_108437994_108438185
H1_mix_00091377	chrX	-	4488	38	NNC	ENSG00000197565.17	novel	865	6	NA	NA	0	-4610	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_1	34.499552722564	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAACATATTACAATAGA	10	True	NA	7	True	AATAAA	-29	NA	108438422	108166240	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_108166812_108169494_108169621_108169944_108170017_108170608_108170717_108170809_108170918_108171386_108171462_108172468_108172533_108174439_108174622_108175089_108175216_108175653_108175798_108176840_108177012_108178683_108178846_108179216_108179439_108180514_108180623_108180896_108180969_108187095_108187280_108187847_108188028_108188516_108188678_108190391_108190497_108191392_108191534_108192472_108192581_108193627_108193698_108194533_108194588_108195081_108195127_108196510_108196580_108202927_108202982_108204319_108204413_108205438_108205481_108205659_108205696_108206517_108206581_108209968_108210005_108211671_108211741_108214111_108214229_108219697_108219743_108221239_108221375_108310747_108310829_108437941_108437994_108438185
H1_mix_00091379	chrX	-	5228	16	FSM	ENSG00000068366.21	ENST00000469796.7	5182	16	-41	-5	0	5	multi-exon	FALSE	canonical	3	7	junction_14	50.2065068824085	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTACTTCATTATGCATT	6	True	NA	-10	True	AATAAA	-23	NA	109733298	109641329	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_109644187_109659353_109659512_109661530_109661646_109663210_109663403_109665419_109665495_109668100_109668274_109669033_109669174_109674401_109674474_109677987_109678112_109678264_109678416_109680997_109681137_109681265_109681376_109682718_109682897_109683135_109683667_109696143_109696197_109733138
H1_mix_00091381	chrX	-	525	1	FSM	ENSG00000236189.2	ENST00000430258.2	517	1	-22	14	-22	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTTCTTCTAGATGCAG	26	False	NA	NA	False	NA	NA	NA	111624748	111624223	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_111624200_111624700
H1_mix_00091383	chrX	-	289	1	FSM	ENSG00000271021.1	ENST00000603201.1	462	1	240	-67	240	67	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATCTCCGGGCTTTTGAG	776	False	NA	NA	False	NA	NA	NA	115454954	115454665	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_115454700_115455000
H1_mix_00091385	chrX	-	2105	2	Intergenic	novelGene_1718	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCCACAATTACTGTTGT	NA	False	NA	NA	False	NA	NA	NA	116818208	116814409	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_116815934_116817627
H1_mix_00091388	chrX	-	438	5	NNC	ENSG00000198918.8	novel	390	3	NA	NA	0	78499	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5463.15510373813	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGGTGCTGGGTGCAGTG	-1	True	NA	NA	False	NA	NA	NA	119791630	119708004	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_119708030_119760795_119760819_119786503_119786733_119789907_119790012_119791573
H1_mix_00091390	chrX	-	2670	11	NNC	ENSG00000125351.13	novel	2343	11	NA	NA	0	3056	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	84.8952295479552	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAAGCTGTTGTTCATCC	23	True	NA	-6	True	AGTAAA	-15	NA	119852963	119830965	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_119831339_119834028_119835028_119837756_119838052_119838366_119838528_119841075_119841259_119841734_119841779_119843190_119843302_119845197_119845297_119851494_119851602_119851766_119851874_119852772
H1_mix_00091391	chrX	-	1817	11	NNC	ENSG00000125351.13	novel	2335	10	NA	NA	0	3056	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	84.8952295479552	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAAGCTGTTGTTCATCC	-12	True	NA	-6	True	AGTAAA	-15	NA	119852998	119830965	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_119831281_119834858_119835028_119837756_119838052_119838366_119838528_119841075_119841259_119841734_119841779_119843190_119843302_119845197_119845297_119851494_119851602_119851766_119851874_119852772
H1_mix_00091393	chrX	-	23675	22	FSM	ENSG00000158290.19	ENST00000680673.1	24020	22	309	36	4	-36	multi-exon	FALSE	non_canonical	2	5	junction_20	54.9374825062724	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTTAAAAAAAAGAATAAAA	270	False	NA	NA	False	CATAAA	-29	NA	120575520	120505955	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_120526857_120530101_120530255_120532421_120532595_120534480_120534587_120535829_120535944_120536926_120537035_120538123_120538210_120538659_120538771_120539267_120539373_120540369_120540563_120541601_120541721_120542965_120543034_120543726_120543810_120544113_120544204_120544480_120544644_120545443_120545518_120546546_120546617_120547135_120547240_120557923_120558040_120560082_120560626_120574550_120574631_120575405
H1_mix_00091394	chrX	-	5119	20	FSM	ENSG00000158290.19	ENST00000674137.11	5097	20	0	-22	0	0	multi-exon	FALSE	non_canonical	3	16	junction_6	41.8317431724056	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCTATTTTTCTCCAATA	6	True	NA	-49	True	NA	NA	NA	120560953	120524650	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_120526857_120530101_120530255_120532421_120532595_120534480_120534587_120535829_120535944_120536926_120537035_120538117_120538210_120538659_120538771_120539267_120539373_120540369_120540563_120541601_120541721_120542965_120543034_120543726_120543810_120544113_120544204_120544480_120544644_120545443_120545518_120546546_120546617_120547135_120547240_120557923_120558040_120560082
H1_mix_00091403	chrX	-	5504	2	Intergenic	novelGene_1726	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	39	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGCCTCAGGTATTTTTT	NA	False	NA	0	True	ATTAAA	-21	NA	125394203	125382043	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_125387306_125393961
H1_mix_00091404	chrX	-	1695	3	Intergenic	novelGene_1734	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	39	junction_2	12.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACATTGTGTAATACTG	NA	False	NA	-20	True	ATTAAA	-11	NA	125394199	125384921	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_125385912_125386838_125387306_125393961
H1_mix_00091405	chrX	-	1825	5	Intergenic	novelGene_1736	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_3	30.5532322349044	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCTTTAAAATATGTAAAGA	NA	False	NA	-77	True	NA	NA	NA	125394199	125384978	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_125385413_125385814_125385912_125386838_125387024_125392030_125392902_125393961
H1_mix_00091406	chrX	-	3607	2	Intergenic	novelGene_1724	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGCCTCAGGTATTTTTT	NA	False	NA	0	True	ATTAAA	-21	NA	125394199	125382043	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_125385413_125393961
H1_mix_00091407	chrX	-	2796	1	FSM	ENSG00000198354.7	ENST00000360028.4	2791	1	0	-5	0	5	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAGACTTAAGTTCTTAA	-1	True	NA	3	True	AATAAA	-31	NA	126166289	126163493	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_126163500_126166300
H1_mix_00091408	chrX	-	4258	25	FSM	ENSG00000102038.16	ENST00000371122.8	4099	25	-82	-77	-82	73	multi-exon	FALSE	canonical	3	15	junction_1	132.898352970314	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAAAGTTAAAGCTTTGC	NA	False	NA	NA	False	NA	NA	NA	129523582	129446427	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_129447302_129448301_129448444_129465519_129465733_129465843_129465963_129468772_129468906_129471203_129471327_129480700_129480815_129481074_129481186_129487017_129487138_129488936_129489086_129490059_129490193_129491940_129492094_129493039_129493076_129496749_129496872_129497844_129498072_129499731_129499842_129504733_129504803_129506079_129506212_129507940_129508097_129511803_129511984_129515686_129515788_129515893_129515995_129516330_129516498_129518360_129518448_129523196
H1_mix_00091409	chrX	-	3881	8	ISM	ENSG00000102034.18	ENST00000335997.11	4145	9	29284	60	28929	-60	3prime_fragment	FALSE	canonical	2	3	junction_1	4.33777898591114	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAGTTTCCTGATGGTTG	8076	False	NA	-9	True	AATAAA	-13	NA	130081432	130064933	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_130067526_130069299_130069678_130071039_130071233_130071335_130071420_130072225_130072418_130074048_130074142_130074580_130074753_130081255
H1_mix_00091415	chrX	-	4737	6	ISM	ENSG00000147255.19	ENST00000370904.6	5413	27	-301	87658	-301	-75025	5prime_fragment	FALSE	canonical	2	10	junction_4	2.65329983228432	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTACTTGGGGTCTTTTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	131579200	131361168	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_131364927_131368367_131368450_131368951_131369053_131389016_131389149_131399573_131399705_131578667
H1_mix_00091416	chrX	-	2812	13	FSM	ENSG00000213468.7	ENST00000665076.1	2812	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	59.8629801203456	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACAGAGTTGGGTTTTT	-18	True	NA	-6	True	AATAAA	-13	NA	131830620	131691522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_131692637_131695843_131695914_131709497_131709557_131749305_131749459_131755597_131755747_131756610_131756710_131768548_131768697_131783886_131784040_131785156_131785259_131793993_131794116_131794296_131794467_131825221_131825366_131830291
H1_mix_00091417	chrX	-	2552	10	FSM	ENSG00000213468.7	ENST00000654978.1	2532	10	0	-20	0	0	multi-exon	FALSE	canonical	2	3	junction_1	68.9428104381531	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACAGAGTTGGGTTTTT	-1	True	NA	-6	True	AATAAA	-13	NA	131830643	131691522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_131692637_131711650_131711721_131749305_131749459_131755597_131755747_131756610_131756710_131768548_131768697_131783886_131784040_131794296_131794467_131825221_131825366_131830291
H1_mix_00091418	chrX	-	2990	5	NIC	ENSG00000213468.7	novel	1805	4	NA	NA	0	88	intron_retention	FALSE	canonical	3	34	junction_1	74.6236390160651	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTTGTCTGGGGAGGGG	17	True	NA	76	True	CATAAA	-23	NA	131830585	131793664	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_131794116_131794296_131796332_131804971_131805038_131825221_131825366_131830291
H1_mix_00091421	chrX	-	4427	10	NNC	ENSG00000076716.9	novel	4959	9	NA	NA	-373	49942	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	442.639501620745	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGCAAAAAATCTCATAATG	40	False	NA	NA	False	NA	NA	NA	133415862	133250160	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_133250189_133301035_133303070_133303165_133303342_133304724_133304862_133305771_133305919_133306023_133306155_133311257_133311424_133324144_133324537_133339182_133339342_133414805
H1_mix_00091422	chrX	-	4380	10	FSM	ENSG00000156504.17	ENST00000343004.10	4377	10	0	-3	0	3	multi-exon	FALSE	canonical	3	63	junction_7	48.1663783151692	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTTAAAAGTCTGTCCT	-15	True	NA	-14	True	AATAAA	-28	NA	134797205	134769562	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_134772284_134781820_134781918_134785885_134785951_134787471_134787534_134788729_134788832_134789084_134789140_134789222_134789267_134789579_134789637_134793814_134793894_134796107
H1_mix_00091424	chrX	-	2737	12	NIC	ENSG00000156504.17	novel	1059	11	NA	NA	0	-15	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	60.4938354895059	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATGCATAAAATTTACTAG	-1	True	NA	-33	True	AATAAA	-9	NA	134797134	134769581	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_134771355_134772142_134772284_134781820_134781918_134785885_134785951_134787471_134787534_134788729_134788832_134789084_134789140_134789222_134789267_134789579_134789637_134793814_134793894_134796107_134796356_134797120
H1_mix_00091427	chrX	-	2174	5	FSM	ENSG00000101928.13	ENST00000370779.8	773	5	0	-1401	0	18	multi-exon	FALSE	canonical	3	72	junction_1	47.9133332173832	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTATTTGACTTATCTT	-12	True	NA	-5	True	AATAAA	-36	NA	134915227	134887613	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_134889193_134896816_134897035_134899089_134899166_134899279_134899535_134915181
H1_mix_00091428	chrX	-	2635	8	NNC	ENSG00000101928.13	novel	2348	6	NA	NA	-32019	18	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	75.1110742127135	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTATTTGACTTATCTT	NA	False	NA	-5	True	AATAAA	-36	NA	134947276	134887613	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_134889193_134891478_134891641_134896816_134897035_134899089_134899166_134899279_134899535_134915181_134915320_134936632_134936726_134947162
H1_mix_00091433	chrX	-	3553	12	Fusion	ENSG00000147274.14_ENSG00000232611.1	novel	2012	9	NA	NA	0	1220	multi-exon	FALSE	non_canonical	0	0	junction_1	1482.4318138264	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGAGATACTAGAGGTTG	5	True	NA	NA	False	AAAAAG	-1	NA	136880722	136846783	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chrX_-_136846810_136869192_136870418_136872267_136872346_136873245_136874453_136875085_136875169_136875257_136875384_136875470_136875586_136876502_136876656_136877914_136878087_136879016_136879124_136879318_136879454_136880596
H1_mix_00091437	chrX	-	2287	7	FSM	ENSG00000129682.16	ENST00000436198.5	1165	7	0	-1122	0	-7	multi-exon	FALSE	canonical	0	0	junction_5	192.892601090751	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAGAATAATCTTCCAAC	544	False	NA	45	True	AATAAA	-15	NA	139205006	138631580	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_138632987_138635456_138635656_138702983_138703088_138708817_138708929_138857511_138857680_139204058_139204272_139204920
H1_mix_00091439	chrX	-	3796	1	FSM	ENSG00000182195.9	ENST00000370526.5	3895	1	-28	127	-28	-127	mono-exon	FALSE	NA	NA	NA	NA	NA	182	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGACCCTGAATTCTCATT	90	False	NA	NA	False	AATAAA	-8	NA	141177157	141173361	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_141173400_141177200
H1_mix_00091440	chrX	-	200	1	ISM	ENSG00000198573.7	ENST00000358993.3	408	2	852	3	852	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGCTGTGTATATCTCT	890	False	NA	NA	False	AATAAA	-12	NA	141241665	141241465	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_141241500_141241700
H1_mix_00091441	chrX	-	396	2	FSM	ENSG00000198021.7	ENST00000370519.3	691	2	285	10	285	-10	multi-exon	FALSE	canonical	3	10	junction_1	0	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTGTATATCTCTGCC	11	False	NA	NA	False	AATAAA	-15	NA	141584726	141583683	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_141583960_141584606
H1_mix_00091442	chrX	-	988	1	FSM	ENSG00000231686.1	ENST00000445173.1	988	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGGCATGACACCGCGGGA	NA	False	NA	NA	False	NA	NA	NA	146620584	146619596	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_146619600_146620600
H1_mix_00091443	chrX	-	1399	8	FSM	ENSG00000010404.18	ENST00000370441.8	1399	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	51.6096020175332	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGTCATTCTGTGCTT	-37	False	NA	0	True	AATAAA	-26	NA	149505347	149487130	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_149487314_149490313_149490441_149496345_149496517_149498106_149498308_149500948_149501038_149503311_149503490_149504156_149504294_149505034
H1_mix_00091445	chrX	-	836	2	FSM	ENSG00000241769.7	ENST00000451969.1	836	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGAGGGGCCTGCATTG	6602	False	NA	NA	False	NA	NA	NA	149534347	149533295	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_149533988_149534203
H1_mix_00091446	chrX	-	513	1	FSM	ENSG00000241769.7	ENST00000618820.1	513	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTCCTGGGTTTGTTCTT	6521	False	NA	NA	False	NA	NA	NA	149534428	149533915	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_149533900_149534400
H1_mix_00091449	chrX	-	2189	4	FSM	ENSG00000269556.9	ENST00000612022.1	2178	4	0	-11	0	11	multi-exon	FALSE	canonical	3	27	junction_3	113.420554672521	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATCTTCTTTGCTGGA	17	True	NA	NA	False	AATAAA	-28	NA	149631719	149596544	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_149598256_149599553_149599678_149600302_149600480_149631542
H1_mix_00091450	chrX	-	2584	6	FSM	ENSG00000269556.9	ENST00000611119.4	2662	6	90	-12	-30	11	multi-exon	FALSE	canonical	3	40	junction_5	100.266843971474	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATCTTCTTTGCTGGA	NA	False	NA	NA	False	AATAAA	-28	NA	149631822	149596544	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_149598256_149599553_149599678_149600302_149600480_149603986_149604071_149608626_149608835_149631542
H1_mix_00091452	chrX	-	1631	5	NIC	ENSG00000197021.9	novel	1129	6	NA	NA	0	266	combination_of_known_junctions	FALSE	canonical	3	49	junction_4	82.7749207187781	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACAGCTACTTCCTATCC	-3	True	NA	NA	False	NA	NA	NA	149938472	149931930	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_149932768_149933621_149933904_149934004_149934138_149937432_149937481_149938141
H1_mix_00091454	chrX	-	1320	5	FSM	ENSG00000197021.9	ENST00000370404.5	1316	5	0	-4	0	0	multi-exon	FALSE	canonical	3	25	junction_3	92.7523584605804	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTAGTGTTTGAGGCTT	10	True	NA	NA	False	AATAAA	-15	NA	149938459	149932196	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_149932768_149933621_149933904_149934004_149934138_149937413_149937481_149938192
H1_mix_00091455	chrX	-	1130	5	NNC	ENSG00000197021.9	novel	1333	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_4	94.2983960627115	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTAGTGTTTGAGGCTT	-22	True	NA	NA	False	AATAAA	-15	NA	149938491	149932196	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_149932768_149933621_149933904_149934004_149934138_149937432_149937481_149938395
H1_mix_00091457	chrX	-	4906	12	NIC	ENSG00000102181.21	novel	4935	12	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	8.2241330021081	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTCTTCTGATGGTGT	0	True	NA	-26	True	AATAAA	-16	NA	150898708	150766335	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_150769102_150770303_150770370_150776173_150776294_150777443_150777483_150793690_150793757_150795205_150795290_150795417_150795487_150814861_150814937_150816006_150816079_150828305_150829605_150831230_150831294_150898521
H1_mix_00091458	chrX	-	950	7	FSM	ENSG00000102181.21	ENST00000418547.2	965	7	0	15	0	-15	multi-exon	FALSE	canonical	2	8	junction_6	9.88966913276453	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGTCTTACACATATTGA	33	False	NA	NA	False	NA	NA	NA	150831248	150776916	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_150777483_150793690_150793757_150795205_150795290_150795417_150795487_150814861_150814937_150816006_150816079_150831230
H1_mix_00091460	chrX	-	1200	1	FSM	ENSG00000268883.2	ENST00000538162.3	1200	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGGCTGGGGAGGCAGC	607	False	NA	NA	False	GGGGCT	-32	NA	153076968	153075768	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153075800_153077000
H1_mix_00091461	chrX	-	1353	11	NNC	ENSG00000213397.12	novel	1306	10	NA	NA	-20	17770	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	154.02756246854	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTGGACACAGCTAAAAAA	471	False	NA	NA	False	NA	NA	NA	153470596	153429897	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_153429926_153447668_153447910_153454393_153454509_153455541_153455767_153456264_153456365_153456492_153456652_153457136_153457229_153462609_153462672_153464987_153465056_153469145_153469262_153470449
H1_mix_00091463	chrX	-	844	5	FSM	ENSG00000213397.12	ENST00000435662.1	843	5	0	-1	0	-1	multi-exon	FALSE	canonical	3	70	junction_3	218.491847674004	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTTGCCTCCAGCCTGC	NA	False	NA	-20	True	AAGAAA	-14	NA	153456350	153447668	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153447910_153454393_153454509_153454876_153455054_153455541_153455767_153456264
H1_mix_00091469	chrX	-	1167	5	FSM	ENSG00000262919.8	ENST00000620088.4	1160	5	0	-7	0	0	multi-exon	FALSE	canonical	0	0	junction_4	89.0224690738243	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGACCCTTGGCTTTGCT	65	False	NA	-5	True	AATAAA	-17	NA	153599117	153587924	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153588395_153592505_153592734_153594546_153594680_153596003_153596188_153598965
H1_mix_00091474	chrX	-	1664	11	FSM	ENSG00000067829.20	ENST00000370093.5	1662	11	0	-2	0	1	multi-exon	FALSE	canonical	3	258	junction_4	19.1627242322171	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCGTGGGCCTCCCTCAC	-6	True	NA	-34	True	AATAAA	-18	NA	153794381	153785764	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153786450_153786800_153786948_153787050_153787154_153787463_153787598_153787822_153787956_153788074_153788136_153789711_153789825_153790194_153790293_153790563_153790576_153790809_153790852_153794245
H1_mix_00091475	chrX	-	1620	12	FSM	ENSG00000067829.20	ENST00000370092.7	1712	12	93	-1	-38	1	multi-exon	FALSE	canonical	3	258	junction_5	28.9915918275319	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCGTGGGCCTCCCTCAC	93	False	NA	-34	True	AATAAA	-18	NA	153794419	153785764	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153786273_153786354_153786450_153786800_153786948_153787050_153787154_153787463_153787598_153787822_153787956_153788074_153788136_153789711_153789825_153790194_153790293_153790563_153790576_153790809_153790852_153794245
H1_mix_00091480	chrX	-	3598	23	FSM	ENSG00000089820.16	ENST00000370028.7	3372	23	0	-226	0	217	multi-exon	FALSE	canonical	1	1	junction_17	33.12859991354	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTTATTAGGGAGAGAA	24	True	NA	NA	False	NA	NA	NA	153926260	153907149	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153907963_153909069_153909170_153909442_153909536_153909740_153909925_153910011_153910086_153910170_153910405_153910505_153910612_153910699_153910835_153910921_153911000_153911128_153911190_153912699_153912803_153913023_153913052_153913217_153913303_153913408_153913601_153913777_153913880_153918831_153919054_153919154_153919284_153919566_153919687_153920625_153920809_153921096_153921160_153921364_153921528_153921604_153921810_153926135
H1_mix_00091483	chrX	-	8374	26	NIC	ENSG00000172534.14	novel	8375	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_8	95.3083752877993	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTAGGTGTCTCACTGTG	17	True	NA	-4	True	ATTAAA	-19	NA	153971184	153947556	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_153949387_153949552_153949617_153950242_153950544_153950812_153950999_153951349_153951488_153951588_153951708_153951840_153952159_153952513_153953091_153953606_153953771_153954065_153955543_153956190_153956412_153956624_153956764_153956917_153957061_153957313_153957534_153957781_153957887_153958024_153958250_153958568_153958767_153959330_153959492_153959801_153960162_153960234_153960415_153961541_153961649_153962221_153962307_153963224_153963434_153964123_153964285_153964577_153964727_153970647
H1_mix_00091484	chrX	-	3319	13	FSM	ENSG00000184216.14	ENST00000369974.6	3319	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	56.1952820281402	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGGCTCTACTTGTGGAC	-5	True	NA	-6	True	AATAAA	-16	NA	154019876	154010505	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154011918_154012528_154012679_154013042_154013434_154016031_154016098_154016436_154016645_154016948_154017068_154018005_154018121_154018290_154018356_154018598_154018788_154018974_154019079_154019196_154019329_154019430_154019599_154019676
H1_mix_00091486	chrX	-	8250	47	NNC	ENSG00000196924.19	novel	8240	47	NA	NA	0	45147	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	606.537308511403	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGCAGGGTGGCATGCA	-4	True	NA	NA	False	NA	NA	NA	154371222	154303376	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_154303414_154348532_154349037_154349361_154349566_154349648_154349868_154350030_154350208_154350908_154351042_154351580_154351697_154351883_154352022_154352180_154352448_154352552_154352676_154352771_154352925_154353000_154353205_154353295_154353458_154353553_154353728_154353914_154354044_154354150_154354292_154354380_154354484_154354615_154354712_154354824_154355073_154357433_154357624_154358198_154358356_154358444_154358569_154358983_154359155_154359245_154359407_154359483_154359647_154359731_154359906_154359989_154360588_154361307_154361571_154361669_154361788_154361978_154362149_154362241_154362333_154362417_154362579_154362660_154362785_154364021_154364166_154364258_154364373_154364525_154364720_154364820_154364958_154365135_154365260_154365348_154365487_154366023_154366225_154366307_154366471_154366561_154366640_154366731_154366851_154367396_154367545_154367640_154367739_154367841_154368091_154370872
H1_mix_00091487	chrX	-	8252	47	NNC	ENSG00000196924.19	novel	8240	47	NA	NA	0	45147	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	606.537308511403	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGCAGGGTGGCATGCA	-4	True	NA	NA	False	NA	NA	NA	154371222	154303376	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_154303412_154348528_154349037_154349361_154349566_154349648_154349868_154350030_154350208_154350908_154351042_154351580_154351697_154351883_154352022_154352180_154352448_154352552_154352676_154352771_154352925_154353000_154353205_154353295_154353458_154353553_154353728_154353914_154354044_154354150_154354292_154354380_154354484_154354615_154354712_154354824_154355073_154357433_154357624_154358198_154358356_154358444_154358569_154358983_154359155_154359245_154359407_154359483_154359647_154359731_154359906_154359989_154360588_154361307_154361571_154361669_154361788_154361978_154362149_154362241_154362333_154362417_154362579_154362660_154362785_154364021_154364166_154364258_154364373_154364525_154364720_154364820_154364958_154365135_154365260_154365348_154365487_154366023_154366225_154366307_154366471_154366561_154366640_154366731_154366851_154367396_154367545_154367640_154367739_154367841_154368091_154370872
H1_mix_00091493	chrX	-	2885	2	FSM	ENSG00000102178.13	ENST00000481237.1	340	2	-220	-2325	-189	0	multi-exon	FALSE	canonical	3	388	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGATTGTGCGTCCAATCA	3855	False	NA	-4	True	AATAAA	-22	NA	154486804	154483716	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154486334_154486536
H1_mix_00091495	chrX	-	1764	8	FSM	ENSG00000071889.17	ENST00000419205.5	1763	8	0	-1	0	0	multi-exon	FALSE	canonical	3	13	junction_3	22.5759489144478	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTGTTGTCAGTGCGGA	-16	True	NA	-1	True	AATAAA	-30	NA	154516242	154506158	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154508288_154508348_154508473_154508598_154511847_154511872_154512822_154512937_154515759
H1_mix_00091499	chrX	-	1254	8	FSM	ENSG00000130830.15	ENST00000393529.5	794	8	-2	-458	-2	80	multi-exon	FALSE	canonical	3	10	junction_7	19.4548142092996	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCGTATCTTATCCTCG	NA	False	NA	NA	False	NA	NA	NA	154821009	154783572	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154784109_154785050_154785158_154786203_154786401_154789953_154790023_154790982_154791069_154791768_154791848_154792141_154792286_154820973
H1_mix_00091500	chrX	-	1096	2	FSM	ENSG00000237859.2	ENST00000415978.2	1131	2	40	-5	40	5	multi-exon	FALSE	non_canonical	0	0	junction_1	0	184	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATTTTTATTGCTATGGT	NA	False	NA	NA	False	NA	NA	NA	154919063	154908879	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154909695_154918782
H1_mix_00091501	chrX	-	622	3	ISM	ENSG00000185973.12	ENST00000369439.4	1248	7	7	31737	7	-1	5prime_fragment	FALSE	canonical	3	118	junction_1	14	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTATACTTAATAGTGAG	79	False	NA	NA	False	AATAAA	-21	NA	155612870	155524271	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_155524633_155545095_155545278_155612791
H1_mix_00091502	chrX	+	223	1	Intergenic	novelGene_1641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTGCCACCTTTTCCCCT	NA	False	NA	NA	False	ACTAAA	-41	NA	12942433	12942656	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_12942400_12942700
H1_mix_00091503	chrX	+	229	1	Intergenic	novelGene_1646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCCATGAACTGGGCTGG	NA	False	NA	NA	False	NA	NA	NA	16048238	16048467	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_16048200_16048500
H1_mix_00091505	chrX	+	207	1	Intergenic	novelGene_1665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAATGATCTGCAAGTCC	NA	False	NA	NA	False	NA	NA	NA	47806946	47807153	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_47806900_47807200
H1_mix_00091506	chrX	+	432	1	Intergenic	novelGene_1666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTGCTTGCCAATTATAA	NA	False	NA	NA	False	TATAAA	-4	NA	47905925	47906357	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_47905900_47906400
H1_mix_00091508	chrX	+	1151	1	Intergenic	novelGene_1670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAATACTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	71418806	71419957	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_71418800_71420000
H1_mix_00091509	chrX	+	2242	1	Intergenic	novelGene_1672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGAGAGCTACCATATAAT	NA	False	NA	NA	False	AATGAA	-22	NA	77742954	77745196	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_77743000_77745200
H1_mix_00091510	chrX	+	211	1	Intergenic	novelGene_1673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	250	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGATAACATGTGCACCC	NA	False	NA	NA	False	ACTAAA	-30	NA	80570959	80571170	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_80571000_80571200
H1_mix_00091511	chrX	+	237	1	Intergenic	novelGene_1678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGATGAAAGGTGCAAAGG	NA	False	NA	NA	False	NA	NA	NA	90775530	90775767	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_90775500_90775800
H1_mix_00091512	chrX	+	262	1	Intergenic	novelGene_1679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGCCGAACGAGCCATG	NA	False	NA	NA	False	NA	NA	NA	90776826	90777088	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_90776800_90777100
H1_mix_00091513	chrX	+	265	1	Intergenic	novelGene_1683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGCTCCGTGAGAAAG	NA	False	NA	NA	False	NA	NA	NA	92824677	92824942	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_92824700_92824900
H1_mix_00091514	chrX	+	2079	1	Intergenic	novelGene_1688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAATGAATCTGTGTG	NA	False	NA	NA	False	AAAAAG	-7	NA	94691614	94693693	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_94691600_94693700
H1_mix_00091515	chrX	+	2822	1	Intergenic	novelGene_1692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	AATAAA	-18	NA	95025908	95028730	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_95025900_95028700
H1_mix_00091516	chrX	+	285	1	Intergenic	novelGene_1693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCATGGAAAAGCAGAAGCA	NA	False	NA	NA	False	AATAGA	-40	NA	95971934	95972219	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_95971900_95972200
H1_mix_00091517	chrX	+	723	1	Intergenic	novelGene_1700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCCCAATCCCTTATTT	NA	False	NA	NA	False	NA	NA	NA	111544153	111544876	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_111544200_111544900
H1_mix_00091518	chrX	+	317	1	Intergenic	novelGene_1704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACATTCCTTTTTAGTTA	NA	False	NA	NA	False	NA	NA	NA	111546317	111546634	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_111546300_111546600
H1_mix_00091522	chrX	+	259	1	Intergenic	novelGene_1705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCAACCTCAATACCGTC	NA	False	NA	NA	False	NA	NA	NA	112534728	112534987	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_112534700_112535000
H1_mix_00091523	chrX	+	236	1	Intergenic	novelGene_1711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAGAGAGAATGGGCGAT	1343	False	NA	NA	False	NA	NA	NA	114601570	114601806	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_114601600_114601800
H1_mix_00091524	chrX	+	836	1	Intergenic	novelGene_1712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTTTGTGATTTTGAGG	2264	False	NA	NA	False	AATAGA	-37	NA	114602491	114603327	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_114602500_114603300
H1_mix_00091525	chrX	+	2387	1	Antisense	novelGene_ENSG00000289287.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAGAAATGGAGGAAAGGG	3199	False	NA	NA	False	NA	NA	NA	114603426	114605813	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chrX_+_114603400_114605800
H1_mix_00091526	chrX	+	3956	1	NIC	ENSG00000229335.2	novel	3499	3	NA	NA	61995	382	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCTGTGGGCATGAACAT	NA	False	NA	NA	False	TTTAAA	-21	NA	115903004	115906960	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_115903000_115907000
H1_mix_00091527	chrX	+	6254	1	Intergenic	novelGene_1714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGGCAACATAGTGAGAT	NA	False	NA	NA	False	NA	NA	NA	115922394	115928648	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_115922400_115928600
H1_mix_00091528	chrX	+	202	1	Intergenic	novelGene_1717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGGGTGATATTGTGGGG	NA	False	NA	NA	False	NA	NA	NA	116812906	116813108	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_116812900_116813100
H1_mix_00091531	chrX	+	273	1	Intergenic	novelGene_1742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACTCCCGAACTCAGGTG	NA	False	NA	NA	False	NA	NA	NA	138291863	138292136	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_138291900_138292100
H1_mix_00091535	chrX	+	1789	1	Intergenic	novelGene_1630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAACGGGGCTCGTCTTTC	23	True	NA	NA	False	NA	NA	NA	319199	320988	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_319200_321000
H1_mix_00091536	chrX	+	553	3	FSM	ENSG00000236017.8	ENST00000419737.7	553	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATCTGGAGATGGGATCAT	NA	False	NA	14	True	GATAAA	-23	NA	1403458	1414028	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_1403586_1412742_1412889_1413748
H1_mix_00091537	chrX	+	1087	8	FSM	ENSG00000196433.13	ENST00000381229.9	1087	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	4.49943307086389	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGGAACTAACGTCAAAGC	0	True	NA	-52	True	NA	NA	NA	1615163	1643027	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_1615269_1623138_1623314_1624268_1624399_1627702_1627772_1629820_1629940_1633149_1633291_1636437_1636561_1642802
H1_mix_00091538	chrX	+	290	3	FSM	ENSG00000124343.14	ENST00000519244.1	313	3	0	23	0	-23	multi-exon	FALSE	canonical	1	3	junction_2	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTAGCTCCTGAATAAAA	82	False	NA	NA	False	NA	NA	NA	2794534	2808354	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_2794604_2797309_2797361_2808184
H1_mix_00091539	chrX	+	3431	11	NNC	ENSG00000056998.20	novel	3192	11	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	115.357227775289	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATGTGGCCTCCTTCCA	8	True	NA	27	True	ATTAAA	-13	NA	2828797	2882817	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_2829087_2830060_2830196_2843212_2843355_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2875809_2875915_2877202_2877308_2881051
H1_mix_00091540	chrX	+	3178	10	NNC	ENSG00000056998.20	novel	3192	11	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_2	107.003634413873	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATGTGGCCTCCTTCCA	8	True	NA	27	True	ATTAAA	-13	NA	2828797	2882817	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_2828976_2830060_2830196_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2875809_2875915_2877202_2877308_2881051
H1_mix_00091541	chrX	+	3417	12	FSM	ENSG00000056998.20	ENST00000381163.7	3393	12	-24	0	-24	0	multi-exon	FALSE	canonical	3	20	junction_2	124.798813302262	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGGCCTCCTTCCAG	8	True	NA	28	True	ATTAAA	-14	NA	2828797	2882818	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_2828976_2830060_2830196_2842997_2843091_2843212_2843355_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2875809_2875915_2877199_2877308_2881051
H1_mix_00091542	chrX	+	350	2	Intergenic	novelGene_1640	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGGGGAAATGCCAGACG	8382	False	NA	NA	False	NA	NA	NA	7740986	7769164	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_7741236_7769063
H1_mix_00091543	chrX	+	949	2	FSM	ENSG00000047644.20	ENST00000466248.1	531	2	-517	99	24	-99	multi-exon	FALSE	canonical	3	13	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAAGTTTCCTTTTTGTG	24	True	NA	NA	False	AATAAA	-19	NA	10015277	10016763	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_10015859_10016395
H1_mix_00091544	chrX	+	3681	23	NNC	ENSG00000046651.16	novel	4299	23	NA	NA	2	0	intron_retention	FALSE	canonical	2	9	junction_20	40.4368705004204	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCTTATTTTTGTCTTAA	8	True	NA	5	True	AATAAA	-17	NA	13734749	13769353	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_13735084_13735247_13735347_13736107_13736297_13736477_13736679_13738845_13738915_13739001_13739033_13744414_13744520_13746318_13746456_13746779_13746954_13749426_13749534_13751248_13751369_13753367_13753442_13755150_13755243_13756577_13756768_13757659_13757791_13758336_13758449_13760114_13760721_13761084_13761212_13762343_13762445_13767126_13767285_13768056_13768225_13768717_13768786_13769065
H1_mix_00091545	chrX	+	3590	24	NNC	ENSG00000046651.16	novel	3736	24	NA	NA	1	-6	intron_retention	FALSE	canonical	1	2	junction_2	36.1684778525463	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCATAGTATTTCTCATT	18	True	NA	-43	True	NA	NA	NA	13734846	13769305	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_13735084_13735247_13735347_13736167_13736297_13736477_13736679_13738845_13738915_13739001_13739033_13744414_13744520_13746318_13746456_13746779_13746954_13749426_13749534_13751248_13751369_13753367_13753442_13755150_13755243_13756577_13756768_13757659_13757791_13758336_13758449_13760114_13760721_13761084_13761212_13762343_13762445_13763744_13763856_13767126_13767285_13768053_13768225_13768717_13768786_13769065
H1_mix_00091546	chrX	+	6549	5	NIC	ENSG00000186312.10	novel	926	4	NA	NA	-4	0	intron_retention	FALSE	canonical	3	4	junction_1	54.3570372628973	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCGGCCGCCTGCTGCCC	NA	False	NA	NA	False	NA	NA	NA	15674968	15703349	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_15675025_15675689_15675779_15688660_15688859_15692962_15693059_15697239
H1_mix_00091547	chrX	+	2072	5	NIC	ENSG00000186312.10	novel	926	4	NA	NA	-79	-3	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	54.3570372628973	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAGGTGTCTTTATTATC	9	True	NA	NA	False	AATAAA	-18	NA	15675466	15703721	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_15675779_15688660_15688859_15692962_15693059_15697239_15697766_15702781
H1_mix_00091548	chrX	+	1602	11	NNC	ENSG00000169249.14	novel	5385	13	NA	NA	46	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	39.4437574275068	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGTATATCTTATTTAT	84	False	NA	12	True	AATAAA	-18	NA	15790557	15823260	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_15790734_15790933_15791014_15799871_15799954_15803687_15803797_15804110_15804198_15808232_15808272_15809199_15809319_15815676_15815891_15818586_15818643_15820206_15820317_15822730
H1_mix_00091549	chrX	+	2626	4	Fusion	ENSG00000126010.6_ENSG00000182798.10	novel	2417	3	NA	NA	8	-2883	multi-exon	FALSE	canonical	1	2	junction_3	27.3536509852382	133	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTCAGAACCCTGAGGCAG	8	True	NA	NA	False	NA	NA	NA	16123572	16168581	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chrX_+_16124367_16150304_16150657_16152255_16152636_16167481
H1_mix_00091550	chrX	+	1754	3	Intergenic	novelGene_1653	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_2	38	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCGGGTCTTCATTTTCT	68	False	NA	16	True	AATAAA	-30	NA	16577178	16584007	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_16577286_16581567_16581717_16582509
H1_mix_00091551	chrX	+	2622	3	Intergenic	novelGene_1654	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_2	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTTTCTTCGGGTCTTC	3	True	NA	9	True	AATAAA	-23	NA	16577215	16584000	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_16577286_16580619_16580739_16581567
H1_mix_00091554	chrX	+	5052	20	FSM	ENSG00000149970.16	ENST00000645245.1	5040	20	-12	0	0	0	multi-exon	FALSE	canonical	3	16	junction_8	13.648130573234	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGTATATGTAAAAAAAAAAA	7	True	NA	NA	False	ATTAAA	-13	NA	21374455	21654263	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_21374962_21426496_21426661_21432611_21432815_21440693_21440782_21470765_21470808_21490458_21490579_21497786_21497847_21501519_21501589_21526866_21527001_21531855_21532068_21563237_21563453_21590571_21590621_21591021_21591195_21594973_21595048_21595323_21595396_21601281_21601350_21606778_21606880_21609070_21609618_21648830_21649028_21652305
H1_mix_00091558	chrX	+	7579	11	FSM	ENSG00000005889.16	ENST00000379177.5	7558	11	-21	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	15.2515572975352	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAGTGGAGTGTTGGCTA	-19	True	NA	12	True	AATAAA	-22	NA	24149723	24216089	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_24149795_24151690_24151801_24152719_24152831_24161714_24161843_24172714_24172801_24179182_24179771_24207325_24207476_24207711_24207856_24208217_24208371_24208899_24209041_24210192
H1_mix_00091560	chrX	+	12695	13	NNC	ENSG00000067992.17	novel	12720	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	53.3952765285054	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCGTCACTGTGGTGTT	10	True	NA	17	True	AATAAA	-18	NA	24465285	24550466	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_24465562_24494741_24494884_24498828_24498901_24503326_24503512_24505208_24505299_24518932_24519011_24526197_24526275_24527573_24527676_24528075_24528187_24531656_24531771_24533928_24534069_24539133_24540890_24540914
H1_mix_00091561	chrX	+	801	5	FSM	ENSG00000101868.13	ENST00000494204.1	806	5	0	5	0	-5	multi-exon	FALSE	canonical	3	167	junction_1	14.0066948278314	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCACAGCTTGCTTTTAT	6719	False	NA	NA	False	TTTAAA	-26	NA	24812829	24841978	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_24812864_24814978_24815112_24821451_24821584_24826426_24826602_24841651
H1_mix_00091562	chrX	+	507	1	FSM	ENSG00000236683.3	ENST00000415560.1	1062	1	204	351	204	-351	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATTGTTCCCTCTGGCTT	306	False	NA	NA	False	NA	NA	NA	26748232	26748739	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_26748200_26748700
H1_mix_00091563	chrX	+	327	1	FSM	ENSG00000226781.1	ENST00000436520.1	327	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTCTCGTATGGGGTG	4	False	NA	NA	False	TATAAA	-43	NA	33041394	33041721	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_33041400_33041700
H1_mix_00091564	chrX	+	2089	1	FSM	ENSG00000235510.1	ENST00000421222.1	227	1	-285	-1577	-285	1577	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAAGTACTTTTAGCACA	NA	False	NA	NA	False	ATTAAA	-16	NA	36957627	36959716	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_36957600_36959700
H1_mix_00091565	chrX	+	1889	8	FSM	ENSG00000182220.15	ENST00000636251.1	1877	8	-12	0	0	0	multi-exon	FALSE	canonical	2	14	junction_7	399.785554761448	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTTAATGATGATTCCAAA	-9	True	NA	11	True	NA	NA	NA	40580957	40606617	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_40581103_40591233_40591366_40597248_40597345_40597526_40597665_40598680_40598735_40599591_40599742_40600761_40600882_40605563
H1_mix_00091566	chrX	+	1434	3	FSM	ENSG00000215301.11	ENST00000643821.1	1434	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	340.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAATTTGTGGATTTCAA	89	False	NA	NA	False	ATTAAA	-22	NA	41334011	41338780	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_41334298_41337407_41337466_41337690
H1_mix_00091567	chrX	+	7300	9	FSM	ENSG00000215301.11	ENST00000645574.1	7284	9	-16	0	0	0	multi-exon	FALSE	canonical	3	628	junction_1	53.0234323200602	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCCAGATTCTCAGATGT	73	False	NA	-27	True	AATGAA	-24	NA	41340005	41349851	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_41342837_41343215_41344129_41344238_41344400_41345179_41345325_41345403_41345549_41346228_41346411_41346504_41346623_41346858_41347452_41347639
H1_mix_00091568	chrX	+	373	1	FSM	ENSG00000214019.2	ENST00000397254.2	1590	1	1364	-147	1364	147	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGAATGCAGTGTGCTCA	1999	False	NA	NA	False	AATAAA	-8	NA	44030695	44031068	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_44030700_44031100
H1_mix_00091569	chrX	+	5065	29	NIC	ENSG00000147050.17	novel	6094	30	NA	NA	75	-34	intron_retention	FALSE	canonical	3	58	junction_13	85.0888716074468	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCCAGTTTTTGTTCAT	24	False	NA	78	True	AAAAAG	-12	NA	44873626	45112291	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_44873713_44873923_44873988_44961283_44961393_44974665_44974716_45010960_45011020_45020609_45020731_45034930_45034986_45037654_45037690_45051708_45051803_45053828_45053956_45059005_45059105_45059246_45059467_45060021_45060157_45060608_45060765_45061323_45061420_45063421_45063818_45069578_45070358_45076696_45076827_45078399_45078506_45079145_45079352_45082575_45082641_45082714_45082790_45083459_45083609_45085864_45085980_45089742_45089931_45090722_45090865_45107409_45107537_45110078_45110250_45111381
H1_mix_00091570	chrX	+	5135	27	NNC	ENSG00000147050.17	novel	7459	24	NA	NA	-66918	0	intron_retention	FALSE	canonical	3	47	junction_11	72.2510006892065	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGTAGTATAATAGTAG	NA	False	NA	7	True	AATAAA	-12	NA	44951147	45112598	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_44951196_44961283_44961393_44974665_44974716_45010960_45011020_45020609_45020731_45034930_45034986_45037654_45037690_45051708_45051803_45053828_45053956_45059005_45059105_45059246_45059467_45060608_45060765_45061323_45061420_45063421_45063818_45069578_45070358_45076696_45076827_45078399_45078506_45079145_45079352_45082575_45082641_45082714_45082790_45083459_45083609_45085864_45085980_45089742_45089931_45090722_45090865_45107409_45107537_45110078_45110250_45111381
H1_mix_00091572	chrX	+	12117	12	FSM	ENSG00000147050.17	ENST00000675546.1	12117	12	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_3	33.8562835214425	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTATTGTTAAGTTGCA	2550	False	NA	20	True	AATATA	-36	NA	45061527	45112542	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_45063818_45069578_45076827_45078399_45078506_45079145_45079352_45082575_45082790_45083459_45083609_45085864_45085980_45089742_45089931_45090722_45090865_45107409_45107537_45110078_45110250_45111381
H1_mix_00091575	chrX	+	2016	7	FSM	ENSG00000130988.13	ENST00000457380.5	2041	7	23	2	-2	-1	multi-exon	FALSE	canonical	0	0	junction_2	6.79256129077161	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTATGTTCCTTTTTATT	19	False	NA	25	True	AATAAA	-19	NA	47078377	47093312	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_47078710_47080316_47080937_47081129_47081308_47084417_47084601_47091677_47091810_47092060_47092216_47092896
H1_mix_00091577	chrX	+	3363	24	NIC	ENSG00000182872.16	novel	3201	24	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	71.1105797737973	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTGGCCTCTCCTCTTT	17	True	NA	26	True	AATAAA	-15	NA	47145280	47186811	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_47145517_47147356_47147499_47169314_47169499_47171027_47171259_47173127_47173198_47175018_47175093_47176499_47176587_47179102_47179164_47179318_47179496_47179879_47180038_47180211_47180310_47180418_47180507_47181214_47181402_47181506_47181647_47181748_47181867_47181950_47182043_47182161_47182327_47185054_47185205_47185301_47185368_47185441_47185631_47185715_47185791_47186064_47186172_47186257_47186388_47186473
H1_mix_00091579	chrX	+	608	1	FSM	ENSG00000188459.4	ENST00000444248.1	1494	1	-156	1042	-156	-1042	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCCTTCATACTTCTTTG	NA	False	NA	NA	False	NA	NA	NA	47803139	47803747	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_47803100_47803700
H1_mix_00091581	chrX	+	574	4	FSM	ENSG00000102312.24	ENST00000486272.1	567	4	-7	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	55.3232922616385	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTCGTGCTGCTCAGC	-35	True	NA	NA	False	NA	NA	NA	48508958	48511375	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48509104_48509423_48509708_48509892_48509957_48511294
H1_mix_00091583	chrX	+	3854	17	Fusion	ENSG00000102312.24_ENSG00000147155.11	novel	2079	14	NA	NA	0	0	multi-exon	FALSE	canonical	3	77	junction_1	300.920248726718	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTAACACTGAGAGATCCT	25	True	NA	9	True	AATAAA	-10	NA	48509018	48528710	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chrX_+_48509104_48509783_48509957_48511365_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374_48521908_48523698_48524073_48526988_48527026_48527154_48527286_48528233
H1_mix_00091587	chrX	+	1740	10	NNC	ENSG00000101940.18	novel	5457	10	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	52.7214904527135	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCGGCTCCCAGCTCTGC	-2	True	NA	11	True	AATAAA	-20	NA	48597497	48605118	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_48597653_48597955_48598038_48598716_48598958_48599352_48599463_48599586_48599718_48600318_48600627_48601783_48601965_48602064_48602207_48604271_48604391_48604847
H1_mix_00091588	chrX	+	1781	10	NNC	ENSG00000101940.18	novel	2124	9	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	64.1318087136866	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGACTCATTTGTGC	-2	True	NA	26	True	NA	NA	NA	48597497	48605193	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_48597653_48597955_48598038_48598750_48598958_48599352_48599463_48599586_48599718_48600318_48600627_48601783_48601965_48602064_48602207_48604271_48604391_48604847
H1_mix_00091591	chrX	+	4501	29	NIC	ENSG00000094631.21	novel	4147	29	NA	NA	9	0	intron_retention	FALSE	canonical	3	7	junction_1	38.7101177250304	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGAGAAAGCTTTTTGAC	27	True	NA	14	True	AATAAA	-19	NA	48802092	48824976	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_48802552_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630_48805672_48806367_48806465_48806608_48806707_48808032_48808138_48808257_48808327_48814439_48814567_48814674_48814741_48814833_48814894_48814961_48815052_48815383_48815491_48815574_48815643_48815883_48816053_48816140_48816270_48816464_48816634_48817325_48817460_48818040_48818110_48818219_48818413_48820105_48820256_48822619_48822795_48822911_48823589_48823671_48823786_48823921_48824069_48824165_48824295_48824543
H1_mix_00091592	chrX	+	817	7	NIC	ENSG00000102103.18	novel	938	7	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_5	130.127715042654	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGAGTGCTTCCTTTG	9	True	NA	24	True	AATAAA	-25	NA	48897938	48903142	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_48898015_48898491_48898577_48901189_48901302_48901929_48902043_48902232_48902385_48902731_48902796_48902927
H1_mix_00091593	chrX	+	4525	1	FSM	ENSG00000279155.1	ENST00000624323.1	817	1	-3475	-233	-3475	233	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGGTAAGGTCCAGAG	NA	False	NA	NA	False	NA	NA	NA	48936516	48941041	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_48936500_48941000
H1_mix_00091594	chrX	+	4026	10	NNC	ENSG00000147144.13	novel	2752	10	NA	NA	0	0	intron_retention	FALSE	canonical	2	6	junction_2	10.3923048454133	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATGTGTTGCTGCTCTGT	-1	True	NA	13	True	AATAAA	-14	NA	49053571	49069854	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_49053878_49061958_49062002_49062234_49062326_49062467_49062602_49063860_49064002_49064369_49064665_49065035_49065099_49065453_49065629_49065746_49065846_49067175
H1_mix_00091595	chrX	+	805	6	FSM	ENSG00000101997.13	ENST00000496651.5	809	6	0	4	0	-4	multi-exon	TRUE	canonical	1	1	junction_2	17.1627503623399	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACAGCCAGATGCCTGGCT	-20	True	NA	NA	False	NA	NA	NA	49235495	49243462	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_49235687_49237085_49237264_49242065_49242149_49242885_49242993_49243117_49243185_49243283
H1_mix_00091596	chrX	+	2267	17	NNC	ENSG00000101997.13	novel	2310	17	NA	NA	14	0	at_least_one_novel_splicesite	TRUE	canonical	3	4	junction_5	11.3300968111486	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTAAGCTGAGGCATGGAT	-6	True	NA	27	True	AATAAA	-18	NA	49235509	49250520	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_49235687_49237085_49237264_49242015_49242149_49242885_49242993_49243117_49243182_49243283_49243463_49246730_49246926_49247495_49247559_49247648_49247769_49248190_49248311_49248406_49248524_49248632_49248735_49248816_49248925_49249166_49249263_49249508_49249569_49249650_49249726_49250147
H1_mix_00091598	chrX	+	529	5	FSM	ENSG00000236362.9	ENST00000440137.2	561	5	30	2	30	-2	multi-exon	FALSE	canonical	0	0	junction_1	0	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGTCTTGCGCATCTTT	1	False	NA	NA	False	AATAAA	-19	NA	49560871	49568203	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_49560950_49561988_49562081_49562545_49562667_49565494_49565621_49568091
H1_mix_00091599	chrX	+	458	5	FSM	ENSG00000101951.17	ENST00000218068.7	790	5	30	302	-15	-5	multi-exon	FALSE	canonical	2	2	junction_1	3.26917420765551	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAAGTCATGCGTGTCT	27	False	NA	NA	False	AATAAA	-15	NA	49829332	49833962	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_49829352_49830398_49830507_49830996_49831085_49832524_49832651_49833845
H1_mix_00091600	chrX	+	1868	1	FSM	ENSG00000187690.4	ENST00000342995.4	1896	1	25	3	25	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTAGAGGTGTGTTTTT	19	True	NA	NA	False	AATAAA	-17	NA	51406972	51408840	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_51407000_51408800
H1_mix_00091602	chrX	+	1857	2	FSM	ENSG00000286118.1	ENST00000650740.1	1857	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTTACACCTTATACAAAA	NA	False	NA	NA	False	NA	NA	NA	52925955	52929574	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_52927240_52929001
H1_mix_00091603	chrX	+	234	1	FSM	ENSG00000235916.1	ENST00000455300.1	423	1	239	-50	239	50	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTTTTATCCAAAAGTCAG	NA	False	NA	NA	False	AATAAA	-26	NA	53826125	53826359	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_53826100_53826400
H1_mix_00091604	chrX	+	2146	14	NNC	ENSG00000102316.17	novel	2026	12	NA	NA	0	1085	intron_retention	FALSE	non_canonical	0	0	junction_13	638.591701282397	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACAGGACCAGGGCAGTG	-12	True	NA	NA	False	AAAAAG	-1	NA	54809096	54817100	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_54809224_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247_54815691_54815880_54816011_54817069
H1_mix_00091607	chrX	+	4781	12	ISM	ENSG00000067445.22	ENST00000375022.8	2306	13	18	0	9	0	intron_retention	FALSE	canonical	3	393	junction_1	34.1210775604215	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTTTTTTCTGTCTTT	10	False	NA	NA	False	ATTAAA	-14	NA	54920833	54931431	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_54920879_54922217_54922292_54922577_54923769_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602
H1_mix_00091608	chrX	+	2292	13	NNC	ENSG00000067445.22	novel	2306	13	NA	NA	3	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	173.12108399101	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATTAAATTTGCAAAATGA	30	False	NA	NA	False	NA	NA	NA	54920853	54931410	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_54920879_54922217_54922292_54922577_54923769_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926671_54927042_54927106_54927666_54927782_54928602_54928711_54931203
H1_mix_00091609	chrX	+	2343	13	NIC	ENSG00000067445.22	novel	2306	13	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	165.209883347079	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTTTTTTCTGTCTTT	42	False	NA	NA	False	ATTAAA	-14	NA	54920865	54931431	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_54920966_54922217_54922292_54922577_54923769_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602_54928711_54931203
H1_mix_00091611	chrX	+	7872	3	FSM	ENSG00000227486.3	ENST00000658575.1	7897	3	25	0	14	0	multi-exon	FALSE	canonical	1	7	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGCAGAGAATAGAGCAAAAA	NA	False	NA	NA	False	NA	NA	NA	55908256	56021946	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_55908801_55985998_55986225_56014844
H1_mix_00091616	chrX	+	394	1	FSM	ENSG00000236735.3	ENST00000422565.1	375	1	-19	0	-19	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1815	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATCACTGATCATCAAAA	NA	False	NA	NA	False	NA	NA	NA	68600079	68600473	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_68600100_68600500
H1_mix_00091618	chrX	+	843	2	FSM	ENSG00000158813.18	ENST00000525810.5	843	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTGAGTTTATGACTTAT	NA	False	NA	4	True	AATAAA	-17	NA	69616066	69861061	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_69616705_69860856
H1_mix_00091620	chrX	+	1163	1	FSM	ENSG00000189401.3	ENST00000338352.3	1723	1	536	24	536	-24	mono-exon	FALSE	NA	NA	NA	NA	NA	1811	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGACAGCGAGACTCCGT	441	False	NA	NA	False	NA	NA	NA	70062992	70064155	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_70063000_70064200
H1_mix_00091621	chrX	+	1883	13	NIC	ENSG00000130055.14	novel	1993	16	NA	NA	81	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	38.8182195195332	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTCTCAGACTTGTGTG	1	True	NA	32	True	AGTAAA	-17	NA	70423111	70433381	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_70423383_70426051_70426112_70426370_70426470_70426647_70426742_70426865_70427012_70427136_70427220_70427312_70427464_70429492_70429715_70429914_70430064_70432306_70432455_70432578_70432662_70432911_70432941_70433033
H1_mix_00091622	chrX	+	4814	13	NIC	ENSG00000082458.12	novel	4529	12	NA	NA	25	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	64.5072670324825	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCAGCTTTGTCTTAAGT	-11	True	NA	12	True	AATAAA	-24	NA	70455131	70505490	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_70455264_70455786_70456103_70479149_70479265_70492106_70492284_70492520_70492597_70493375_70493476_70497179_70497222_70498519_70498571_70499175_70499278_70499876_70500050_70500470_70500581_70500897_70500990_70502162
H1_mix_00091624	chrX	+	3386	7	FSM	ENSG00000196338.15	ENST00000692338.1	3341	7	-7	-38	-7	-1	multi-exon	FALSE	canonical	3	7	junction_1	34.4161622239061	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTGCCTCCCTTGCACA	9	True	NA	9	True	AATAAA	-19	NA	71144853	71171198	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71144965_71148062_71148207_71153476_71153537_71155213_71155364_71164142_71164329_71167010_71167801_71169253
H1_mix_00091625	chrX	+	1607	2	FSM	ENSG00000169562.13	ENST00000647424.1	1603	2	-23	19	3	-4	multi-exon	FALSE	canonical	3	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAAGAGGTGGCTTGTGT	NA	False	NA	NA	False	ATTAAA	-16	NA	71215188	71225196	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71215291_71223691
H1_mix_00091626	chrX	+	1101	4	NNC	ENSG00000147140.17	novel	3208	11	NA	NA	11	-13381	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	5.31245915016974	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTGTGGACTCTCTTC	28	False	NA	14	True	AATAAA	-23	NA	71254824	71272793	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_71255001_71264841_71265065_71266534_71266728_71272284
H1_mix_00091627	chrX	+	3679	11	FSM	ENSG00000147140.17	ENST00000677218.1	3669	11	-10	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	982.722549858301	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTTAATTTTCTGTGG	-8	True	NA	22	True	ATTAAA	-11	NA	71283624	71301158	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71283722_71284396_71284454_71284983_71285098_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71298509_71298706_71298817_71299941
H1_mix_00091628	chrX	+	2483	12	FSM	ENSG00000147140.17	ENST00000677879.1	2483	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	757.892510750198	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTAATTTTCTGTGGTG	-8	True	NA	24	True	ATTAAA	-13	NA	71283624	71301160	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71283722_71284396_71284454_71290628_71290792_71291778_71291973_71294226_71294349_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71297939_71298468_71298509_71298706_71298817_71299941
H1_mix_00091629	chrX	+	555	5	FSM	ENSG00000147140.17	ENST00000486613.6	555	5	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_4	965.516701046647	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGGGGAGATATTGAACTAT	4	True	NA	NA	False	NA	NA	NA	71283693	71294130	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71283722_71284396_71284454_71290628_71290792_71291778_71291973_71294017
H1_mix_00091632	chrX	+	1280	11	FSM	ENSG00000147166.11	ENST00000373829.8	1280	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.86530975637888	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTGTCATTCTCTCACC	1	True	NA	21	True	AATAAA	-21	NA	71301749	71305371	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71301871_71302136_71302187_71302276_71302334_71302410_71302557_71303261_71303357_71303460_71303517_71303626_71303698_71303811_71303912_71304186_71304301_71304541_71304605_71304964
H1_mix_00091634	chrX	+	5134	33	NIC	ENSG00000147133.17	novel	7599	38	NA	NA	84	-18814	combination_of_known_junctions	FALSE	canonical	0	0	junction_32	12.7473955673306	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCATGATTTATAATCCT	111	False	NA	NA	False	AATAAA	-23	NA	71366440	71442146	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_71366495_71367498_71367614_71368053_71368171_71375166_71375287_71376949_71377192_71377602_71377822_71378234_71378454_71378823_71379032_71381742_71381920_71382535_71382664_71382760_71382869_71382990_71383165_71383961_71384136_71384944_71385050_71387260_71387462_71388236_71388379_71388737_71388869_71389584_71389666_71392568_71392719_71392874_71392995_71393300_71393477_71394066_71394246_71397252_71397467_71398571_71398738_71401527_71401740_71406637_71406747_71407573_71407673_71407973_71408152_71421308_71421377_71423116_71423240_71423973_71424067_71424153_71424239_71441699
H1_mix_00091635	chrX	+	4124	9	FSM	ENSG00000147133.17	ENST00000492404.6	4124	9	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_6	9.49259579883184	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTATATTGTTTGAATT	NA	False	NA	-6	True	GGGGCT	-42	NA	71421047	71465937	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71421377_71423116_71424067_71424153_71424239_71454169_71454238_71454740_71454858_71458240_71458367_71459551_71459709_71460625_71460804_71463823
H1_mix_00091636	chrX	+	2645	12	FSM	ENSG00000147174.12	ENST00000373695.1	3213	12	535	33	535	-33	multi-exon	FALSE	canonical	2	2	junction_1	1.97086212624353	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATGTAATCAAAAAATAAAAG	2382	False	NA	-27	True	CATAAA	-39	NA	71580819	71613549	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71580881_71592121_71592169_71592536_71592571_71594330_71594378_71594745_71594780_71597949_71598039_71603587_71604677_71605662_71605730_71608972_71609118_71610680_71610820_71612354_71612560_71612861
H1_mix_00091637	chrX	+	513	5	FSM	ENSG00000215113.7	ENST00000440412.1	532	5	19	0	19	0	multi-exon	FALSE	canonical	1	1	junction_3	0.707106781186548	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTCTGTGGTCTGCCCT	-8	True	NA	NA	False	AATAAA	-16	NA	71765206	71767204	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_71765381_71765923_71766001_71766282_71766329_71766882_71766925_71767030
H1_mix_00091639	chrX	+	772	2	FSM	ENSG00000225470.8	ENST00000453317.1	483	2	-35	-254	0	254	multi-exon	FALSE	canonical	3	526	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGCAACCTTTTAGAAAAG	397	False	NA	NA	False	ATTAAA	-34	NA	73944310	73945200	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_73944466_73944583
H1_mix_00091642	chrX	+	1454	3	FSM	ENSG00000225470.8	ENST00000670192.1	1452	3	-2	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	263	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGGGAATAGTCTCTTCT	-6	True	NA	NA	False	AATAAA	-24	NA	73944338	74000201	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_73944466_73944583_73944663_73998953
H1_mix_00091643	chrX	+	1339	1	ISM	ENSG00000225470.8	ENST00000639185.1	9658	6	66514	909	12270	-134	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACCAAAGGAAGGGTGGAA	NA	False	NA	NA	False	GATAAA	-13	NA	74010697	74012036	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_74010700_74012000
H1_mix_00091646	chrX	+	3954	6	NNC	ENSG00000147100.11	novel	4128	6	NA	NA	-108	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	77.5489522817685	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGGGTATGTATGTTGC	NA	False	NA	20	True	AATAAA	-16	NA	74421384	74533916	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_74422068_74520989_74521135_74524640_74524810_74525749_74525894_74529212_74529442_74531332
H1_mix_00091647	chrX	+	3954	5	NIC	ENSG00000147100.11	novel	4128	6	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_4	71.6275086820699	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGGGTATGTATGTTGC	NA	False	NA	20	True	AATAAA	-16	NA	74421437	74533916	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_74422068_74520989_74521135_74524358_74524810_74525749_74525894_74531332
H1_mix_00091648	chrX	+	1636	7	FSM	ENSG00000094841.14	ENST00000530743.1	1636	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	55.9483889153407	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTGATATTAAAACATTT	521	False	NA	-16	True	NA	NA	NA	75274727	75304572	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_75274759_75293471_75293515_75296341_75296412_75297490_75297554_75299734_75299897_75300866_75300966_75303404
H1_mix_00091649	chrX	+	434	3	NNC	ENSG00000131174.7	novel	2444	3	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	2208.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTAGGTTTTGTTTCTT	-1	True	NA	12	True	AATAAA	-17	NA	77899484	77905383	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_77899594_77902642_77902772_77905187
H1_mix_00091651	chrX	+	4884	6	ISM	ENSG00000165240.22	ENST00000685033.1	5592	11	24104	3	-5286	-3	3prime_fragment	FALSE	canonical	2	3	junction_4	2.22710574513201	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTTTGTCTGTCTCTTT	NA	False	NA	4	True	NA	NA	NA	78038765	78050392	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_78038983_78040590_78040734_78042584_78042789_78043316_78043435_78045469_78045573_78046293
H1_mix_00091652	chrX	+	4289	3	ISM	ENSG00000147145.14	ENST00000614823.5	4454	5	2821	-11	2810	11	3prime_fragment	FALSE	canonical	3	10	junction_1	10	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTTGATCAATTATTCAA	2811	False	NA	22	True	AATAAA	-26	NA	78750540	78758725	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_78750793_78751209_78751312_78754790
H1_mix_00091653	chrX	+	2183	8	FSM	ENSG00000122145.15	ENST00000373294.8	2249	8	22	44	22	-44	multi-exon	FALSE	canonical	0	0	junction_7	1.91662969499982	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAATGAAAAGTAAAACACT	38	False	NA	NA	False	NA	NA	NA	80022263	80031725	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_80022445_80023059_80023241_80024062_80024165_80025602_80025778_80026703_80026869_80027255_80027321_80027990_80028077_80030497
H1_mix_00091658	chrX	+	403	1	Intergenic	novelGene_1690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTGCCTTCTCATATTA	NA	False	NA	NA	False	NA	NA	NA	94698866	94699269	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_94698900_94699300
H1_mix_00091659	chrX	+	3417	26	NIC	ENSG00000147202.19	novel	3730	27	NA	NA	150	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_22	213.59178261347	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCATTTTGTCTGGTGC	57	False	NA	23	True	AGTAAA	-20	NA	96684991	97469835	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_96685191_96738585_96738763_96758153_96758259_96881578_96881719_96912327_96912403_96912482_96912553_96916437_96916575_96918508_96918618_96930732_96930844_96937232_96937352_96939265_96939383_96942017_96942137_96945526_96945592_96948934_96949040_96957827_96958149_96965092_96965208_97072940_97073043_97075166_97075262_97099693_97099796_97114725_97114966_97141664_97141795_97247714_97247840_97348115_97348281_97383908_97384045_97429649_97429746_97469693
H1_mix_00091660	chrX	+	3318	27	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	270	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	209.056714934421	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCATTTTGTCTGGTGC	177	False	NA	23	True	AGTAAA	-20	NA	96685111	97469835	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_96685191_96738585_96738763_96758153_96758259_96763099_96763121_96881578_96881719_96912327_96912403_96912482_96912553_96916437_96916575_96918508_96918618_96930732_96930844_96937232_96937352_96939265_96939383_96942017_96942137_96945526_96945592_96948934_96949040_96957827_96958149_96965092_96965208_97072940_97073043_97075166_97075262_97099693_97099796_97114725_97114966_97141664_97141795_97247714_97247840_97348115_97348281_97383908_97384045_97429649_97429746_97469693
H1_mix_00091661	chrX	+	1793	5	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625767	-4397	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_4	326.115297862581	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAACTTGTCTGTCTATTA	3	True	NA	12	True	AATAAA	-20	NA	97310608	97600600	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_97310659_97348117_97348281_97383908_97384045_97429649_97429746_97599252
H1_mix_00091662	chrX	+	2790	1	Intergenic	novelGene_1695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCGCCAAGGAGAGAGTAG	NA	False	NA	NA	False	NA	NA	NA	98524282	98527072	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_98524300_98527100
H1_mix_00091663	chrX	+	611	5	NIC	ENSG00000281566.3	novel	1309	6	NA	NA	-10	-136	combination_of_known_splicesites	FALSE	canonical	2	10	junction_4	17.5267652463311	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGAATCTTGAGGGAGG	NA	False	NA	NA	False	NA	NA	NA	98573799	98864905	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_98573933_98578985_98579075_98644527_98644575_98731530_98731578_98864610
H1_mix_00091664	chrX	+	1272	6	NIC	ENSG00000281566.3	novel	1309	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_4	20.2286924935845	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGACTAACCTTGCTTGT	20	False	NA	32	True	AATAAA	-29	NA	98573858	98865564	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_98573933_98578985_98579075_98644527_98644575_98731530_98731578_98841940_98842002_98864610
H1_mix_00091665	chrX	+	749	3	NNC	ENSG00000281566.3	novel	625	4	NA	NA	3	-45453	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	23.5	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATTCGCATTGATAGTAT	23	False	NA	NA	False	AATAAA	-24	NA	98573861	98599773	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_98573933_98578985_98579075_98599184
H1_mix_00091666	chrX	+	207	3	ISM	ENSG00000281566.3	ENST00000627700.2	625	4	-13	220467	3	-652	5prime_fragment	FALSE	canonical	3	49	junction_1	3.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTAAAATAGCATGTGT	23	False	NA	NA	False	NA	NA	NA	98573861	98644574	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_98573933_98578985_98579075_98644527
H1_mix_00091667	chrX	+	2045	15	FSM	ENSG00000101811.14	ENST00000415585.6	2074	15	29	0	-3	0	multi-exon	FALSE	canonical	2	2	junction_8	107.938781780437	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGATACACATGACCTT	-11	True	NA	29	True	AATAAA	-27	NA	100820387	100840932	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_100820475_100821526_100821606_100822250_100822421_100823291_100823429_100823885_100824006_100824119_100824258_100826633_100826758_100828039_100828103_100830807_100830868_100831514_100831657_100832733_100832910_100833179_100833473_100837338_100837450_100838238_100838365_100840713
H1_mix_00091668	chrX	+	2335	20	NIC	ENSG00000102384.14	novel	3377	23	NA	NA	7	6961	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	11.8767913067946	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGTGTGTTTAGTAATTTT	4	True	NA	NA	False	CATAAA	-22	NA	101098195	101148254	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_101098235_101098443_101098540_101101057_101101297_101102273_101102412_101109472_101109592_101109890_101109999_101120401_101120451_101120737_101120785_101126708_101126799_101127137_101127267_101127497_101127666_101128715_101128837_101129981_101130074_101132189_101132308_101132391_101132457_101140665_101140761_101145063_101145200_101146152_101146278_101147762_101147812_101147942
H1_mix_00091669	chrX	+	7420	2	ISM	ENSG00000196440.12	ENST00000423738.5	7729	6	2588	0	2569	0	3prime_fragment	FALSE	canonical	3	18	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGTCCTTGTCCTTGA	64	False	NA	24	True	AATAAA	-28	NA	101488043	101495807	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_101488100_101488443
H1_mix_00091671	chrX	+	2676	3	FSM	ENSG00000125962.16	ENST00000477663.6	2664	3	-12	0	-5	0	multi-exon	FALSE	canonical	3	24	junction_1	43.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCCTAGTTCTTCAGC	-18	True	NA	26	True	AATAAA	-25	NA	102599509	102604159	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_102599860_102601463_102601510_102601879
H1_mix_00091672	chrX	+	5189	4	ISM	ENSG00000198932.13	ENST00000537097.2	5901	6	618	626	618	-617	3prime_fragment	TRUE	canonical	3	6	junction_1	2.62466929133727	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCCTTCTTCTTGAAATT	596	False	NA	15	True	AATAAA	-25	NA	102652100	102658457	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_102652266_102652830_102652899_102653220_102653299_102653579
H1_mix_00091673	chrX	+	4104	4	NIC	ENSG00000198908.12	novel	5155	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	27.2559881290128	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTTTGAATCACTTAAT	8202	False	NA	19	True	AATAAA	-15	NA	102720687	102752438	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_102720822_102720956_102721092_102747816_102747912_102748698
H1_mix_00091676	chrX	+	1066	2	FSM	ENSG00000102409.10	ENST00000372691.3	1066	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATTGGTGTGTGTGTACG	6	True	NA	-81	True	NA	NA	NA	103215123	103217099	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103215239_103216148
H1_mix_00091681	chrX	+	1199	3	FSM	ENSG00000172465.14	ENST00000372625.8	1200	3	0	1	0	-1	multi-exon	FALSE	canonical	1	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAATCCTATGTTTTTTT	4	True	NA	NA	False	AATAAA	-23	NA	103628974	103630952	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_103629026_103629493_103629574_103629884
H1_mix_00091686	chrX	+	4153	4	FSM	ENSG00000157502.13	ENST00000357175.6	4173	4	19	1	19	0	multi-exon	FALSE	canonical	2	5	junction_1	0.942809041582063	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGGATTTTTACTTCAT	-6	True	NA	15	True	AATAAA	-16	NA	106168323	106208955	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_106168426_106171011_106171140_106203984_106204171_106205218
H1_mix_00091688	chrX	+	2005	6	FSM	ENSG00000147224.13	ENST00000372418.4	1434	6	-14	-557	-9	0	multi-exon	FALSE	canonical	1	3	junction_2	123.427063482852	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGGTCTGTATCATACA	NA	False	NA	19	True	AATAAA	-19	NA	107628475	107651026	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_107628751_107639294_107639479_107642365_107642491_107645176_107645351_107647605_107647766_107649939
H1_mix_00091689	chrX	+	4188	37	NIC	ENSG00000188153.14	novel	6427	51	NA	NA	-6	-20	combination_of_known_junctions	FALSE	canonical	2	5	junction_36	34.4581066094919	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAATATAGACATATTAA	57	False	NA	NA	False	ATTAAA	-1	NA	108439935	108627249	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_108440207_108539745_108539806_108559063_108559154_108563881_108563927_108568628_108568674_108568758_108568822_108571412_108571467_108571810_108571838_108573573_108573655_108575909_108575973_108577951_108577988_108578077_108578120_108578290_108578384_108580532_108580587_108580681_108580739_108580982_108581028_108582883_108582938_108584483_108584526_108586614_108586748_108591057_108591232_108591560_108591645_108595508_108595602_108596997_108597069_108597376_108597569_108598701_108598871_108601392_108601486_108601884_108601990_108602963_108603062_108606741_108606893_108614910_108615025_108620258_108620427_108621802_108621893_108622675_108622826_108624235_108624335_108625704_108625795_108626209_108626350_108626497
H1_mix_00091690	chrX	+	4847	10	NNC	ENSG00000188153.14	novel	790	4	NA	NA	3290	-8	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	71.0880170833278	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGATGGTCTGTTGTGT	NA	False	NA	14	True	ATTAAA	-11	NA	108677741	108697537	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_108680296_108680678_108680752_108680884_108680957_108681759_108681889_108686030_108686130_108687481_108687695_108692747_108692926_108694806_108694922_108695266_108695440_108696296
H1_mix_00091691	chrX	+	5570	7	FSM	ENSG00000157600.12	ENST00000372068.7	5570	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	3.69684550213647	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGAGTCCTGGCCTTGC	23	True	NA	17	True	ATTAAA	-14	NA	110003113	110177788	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_110003179_110003500_110004165_110067346_110067397_110109079_110109147_110144797_110144877_110171419_110171521_110173244
H1_mix_00091692	chrX	+	9123	18	FSM	ENSG00000077264.16	ENST00000372007.10	9126	18	0	3	0	-3	multi-exon	TRUE	canonical	2	7	junction_11	9.82159191883216	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTATTGCTTCTGTCTT	20	True	NA	15	True	AATAAA	-16	NA	111096190	111227358	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_111096416_111097389_111097457_111097574_111097685_111103158_111103307_111123076_111123279_111142095_111142197_111147736_111147891_111152409_111152448_111162914_111163047_111163561_111163728_111173017_111173082_111192126_111192176_111192505_111192619_111194300_111194419_111195841_111195942_111196443_111196641_111216420_111216559_111220357
H1_mix_00091693	chrX	+	925	4	FSM	ENSG00000101901.12	ENST00000468657.5	916	4	-9	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	29.5296461204668	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAAGTGGAATTGGAATC	-31	True	NA	NA	False	NA	NA	NA	111681169	111688254	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_111681425_111682131_111682295_111684964_111685104_111687886
H1_mix_00091696	chrX	+	2613	1	FSM	ENSG00000187823.3	ENST00000340433.3	2613	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCAGAACATGAAATCCCA	NA	False	NA	NA	False	NA	NA	NA	112454499	112457112	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_112454500_112457100
H1_mix_00091697	chrX	+	750	1	NIC	ENSG00000147246.10	novel	3288	7	NA	NA	15	-323657	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGTTCCACGGAAGGAGC	18	False	NA	NA	False	NA	NA	NA	114584100	114584850	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_114584100_114584800
H1_mix_00091700	chrX	+	3593	3	NNC	ENSG00000229335.2	novel	280	2	NA	NA	0	-9293	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	37	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGTCTCAGATATTTTGT	-1	True	NA	10	True	AATGAA	-19	NA	115841009	115897285	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_115841079_115842839_115843178_115894099
H1_mix_00091702	chrX	+	1096	6	FSM	ENSG00000131724.11	ENST00000371642.1	1096	6	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_5	7.6	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAACGATAATTCATTTG	-1	True	NA	-11	True	NA	NA	NA	118727601	118761520	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_118727727_118741016_118741157_118746953_118747093_118749657_118749779_118758054_118758243_118761137
H1_mix_00091703	chrX	+	1500	11	NNC	ENSG00000131724.11	novel	3996	11	NA	NA	7	10679	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_10	40.9	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTTGGCAATACTCATT	10	True	NA	NA	False	ATTAAA	-6	NA	118727612	118805214	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_118727727_118741016_118741157_118746953_118747093_118749657_118749779_118758054_118758243_118761137_118761290_118766529_118766578_118766843_118766977_118773878_118773976_118776426_118776512_118804931
H1_mix_00091706	chrX	+	5362	3	FSM	ENSG00000177485.7	ENST00000557385.2	5253	3	-109	0	-49	0	multi-exon	FALSE	canonical	2	5	junction_1	10	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGAGTGCGTGTTTTAC	NA	False	NA	15	True	AATAAA	-16	NA	120250702	120258398	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_120250978_120252668_120252771_120253413
H1_mix_00091707	chrX	+	774	5	Intergenic	novelGene_1721	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	25	junction_4	32.7604945017623	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTGTATTATTTGTATC	NA	False	NA	21	True	AGTAAA	-23	NA	122222362	122248548	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_122222603_122227324_122227431_122229825_122229895_122230631_122230758_122248315
H1_mix_00091708	chrX	+	8889	1	Intergenic	novelGene_1722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCCCTATCATGATTTT	NA	False	NA	9	True	ACTAAA	-18	NA	122222367	122231256	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_122222400_122231300
H1_mix_00091709	chrX	+	691	4	NIC	ENSG00000125675.20	novel	784	5	NA	NA	13	-49	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	11.8415464455544	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTATTTAATATTCCAAAT	222	False	NA	9	True	AATAAA	-24	NA	123184165	123253653	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_123184220_123184517_123184645_123185831_123185991_123253302
H1_mix_00091713	chrX	+	8415	7	FSM	ENSG00000101966.13	ENST00000434753.7	8415	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4.87909372276815	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTACCTTGTATTTGTTT	-24	True	NA	NA	False	AATAAA	-38	NA	123859811	123913976	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_123859906_123885630_123886540_123888618_123888719_123891237_123891317_123892730_123892774_123900492_123900694_123906987
H1_mix_00091716	chrX	+	5218	35	FSM	ENSG00000101972.20	ENST00000218089.13	5218	35	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	85.2522615353154	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGCTGATTTTATAATT	NA	False	NA	7	True	AATAAA	-19	NA	123960518	124101498	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_123960867_124021366_124021432_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568_124042646_124045163_124045369_124047353_124047506_124049004_124049079_124050185_124050310_124051120_124051220_124051314_124051395_124056127_124056236_124057865_124057978_124061223_124061342_124061770_124061875_124062901_124062995_124063115_124063206_124063847_124064052_124065875_124065947_124066174_124066263_124066355_124066437_124068563_124068657_124071148_124071324_124076331_124076472_124077956_124078059_124081379_124081529_124083420_124083550_124086546_124086771_124090574_124090765_124090853_124090965_124094017_124094145_124095371_124095450_124100573
H1_mix_00091718	chrX	+	6132	35	NIC	ENSG00000101972.20	novel	6143	38	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	84.6796936640133	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATCCCTAATTGGATTA	14	False	NA	NA	False	AATAAA	-22	NA	123961331	124102656	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_123961436_124021366_124021432_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568_124042646_124045163_124045369_124047353_124047506_124049004_124049079_124050185_124050310_124051120_124051220_124051314_124051395_124056127_124056236_124057865_124057978_124061223_124061342_124061770_124061875_124062901_124062995_124063115_124063206_124063847_124064052_124065875_124065947_124066174_124066263_124066355_124066437_124068563_124068657_124071148_124071324_124076331_124076472_124077956_124078059_124081379_124081529_124083420_124083550_124086546_124086771_124090574_124090765_124090853_124090965_124094017_124094145_124095371_124095450_124100573
H1_mix_00091719	chrX	+	6028	34	NIC	ENSG00000101972.20	novel	6143	38	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	76.0757560669431	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATCCCTAATTGGATTA	-21	True	NA	NA	False	AATAAA	-22	NA	123962041	124102656	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_123962107_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568_124042646_124045163_124045369_124047353_124047506_124049004_124049079_124050185_124050310_124051120_124051220_124051314_124051395_124056127_124056236_124057865_124057978_124061223_124061342_124061770_124061875_124062901_124062995_124063115_124063206_124063847_124064052_124065875_124065947_124066174_124066263_124066355_124066437_124068563_124068657_124071148_124071324_124076331_124076472_124077956_124078059_124081379_124081529_124083420_124083550_124086546_124086771_124090574_124090765_124090853_124090965_124094017_124094145_124095371_124095450_124100573
H1_mix_00091721	chrX	+	5191	24	FSM	ENSG00000122126.18	ENST00000371113.9	5173	24	-18	0	-18	0	multi-exon	FALSE	non_canonical	0	0	junction_1	16.304057968438	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGTGTGATTTTGGTGA	-32	True	NA	11	True	AATAAA	-19	NA	129540240	129592556	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_129540479_129540743_129540824_129544957_129545038_129548562_129548602_129557324_129557436_129557860_129557951_129558632_129558754_129558839_129559002_129560549_129560652_129561178_129561294_129562383_129562501_129562598_129562787_129565771_129565884_129567253_129567364_129569263_129569400_129575139_129575251_129575896_129576063_129576316_129576553_129584343_129584368_129587001_129587119_129588178_129588264_129588885_129589014_129589844_129589957_129590145
H1_mix_00091722	chrX	+	5082	22	NIC	ENSG00000122126.18	novel	5138	23	NA	NA	-18	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	19.0841316709106	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGATTTTGGTGAGGAAG	-32	True	NA	16	True	AATAAA	-24	NA	129540240	129592561	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_129540479_129540743_129540824_129544957_129545038_129548562_129548602_129557324_129557436_129558632_129558754_129558839_129559002_129560549_129560652_129561178_129561294_129562383_129562501_129562598_129562787_129565771_129565884_129567253_129567364_129569263_129569400_129575139_129575251_129575896_129576063_129576316_129576553_129587001_129587119_129588178_129588264_129588885_129589014_129589844_129589957_129590145
H1_mix_00091726	chrX	+	1615	10	FSM	ENSG00000102078.16	ENST00000218197.9	1616	10	0	1	0	-1	multi-exon	FALSE	canonical	1	2	junction_1	29.321967494999	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGCTTTGTCTTCATTT	100	False	NA	11	True	ATTAAA	-20	NA	130340051	130373360	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_130340354_130345181_130345276_130346543_130346692_130349250_130349346_130350645_130350732_130358639_130358736_130364627_130364753_130365540_130365677_130371563_130371645_130372908
H1_mix_00091727	chrX	+	1687	5	NIC	ENSG00000134597.17	novel	1823	6	NA	NA	22	-313	intron_retention	FALSE	canonical	3	84	junction_4	37.1954298267946	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCTTTCCACATTTTTT	35	False	NA	46	True	ATTAAA	-17	NA	130402026	130413343	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_130402371_130403801_130403854_130409256_130409387_130411347_130411526_130412360
H1_mix_00091728	chrX	+	3179	11	FSM	ENSG00000134602.16	ENST00000354719.10	3179	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_9	147.975673676453	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAATGTTTGTTTTCCTTG	-1	True	NA	17	True	AATAAA	-19	NA	132023301	132075943	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_132023408_132023507_132023660_132054630_132054862_132063432_132063490_132068214_132068324_132068411_132068570_132069477_132069664_132071068_132071218_132072267_132072362_132072965_132073094_132074134
H1_mix_00091730	chrX	+	3358	3	FSM	ENSG00000232160.7	ENST00000441399.3	3771	3	0	413	0	-413	multi-exon	FALSE	canonical	0	0	junction_2	2	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTAGTAGTTAATTCCCA	-36	True	NA	NA	False	AAAAAG	-9	NA	132218208	132432449	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_132218838_132239619_132239712_132429812
H1_mix_00091732	chrX	+	4679	10	ISM	ENSG00000156531.18	ENST00000625464.2	4434	11	82	3	21	-1	intron_retention	FALSE	canonical	3	76	junction_5	97.4907403010381	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATATTTGTTTGTCTTTTTT	14	True	NA	15	True	AATAAA	-15	NA	134373393	134428788	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_134373468_134377571_134377756_134378004_134378107_134393500_134393635_134393908_134393953_134413487_134413658_134413822_134413967_134415015_134415121_134417168_134417303_134425200
H1_mix_00091733	chrX	+	1265	2	Genic_Genomic	ENSG00000156500.16	novel	2598	11	NA	NA	2023	-7827	multi-exon	TRUE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGTTTAGAGATTTATT	NA	False	NA	12	True	AATAAA	-16	NA	134841195	134845064	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chrX_+_134841241_134843844
H1_mix_00091735	chrX	+	4510	6	NNC	ENSG00000173275.13	novel	4034	5	NA	NA	-40	352	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	18.2909813842779	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGATTTCTTCTCTTTATG	1103	False	NA	NA	False	GATAAA	-14	NA	135344755	135363765	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_135344836_135347018_135347473_135348753_135348838_135349109_135349315_135359891_135360006_135360192
H1_mix_00091736	chrX	+	3792	17	FSM	ENSG00000165359.16	ENST00000370752.4	3793	17	1	0	0	0	multi-exon	FALSE	canonical	2	4	junction_10	13.4111660566857	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAATGCTGGATAAATTTC	19	True	NA	15	True	AATAAA	-26	NA	135520659	135582509	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_135521104_135521240_135521319_135545422_135545573_135546379_135546470_135546701_135546886_135547136_135547266_135549641_135549806_135551993_135552147_135556167_135556301_135569336_135569432_135572814_135573034_135573938_135574063_135575083_135575227_135577192_135577428_135579787_135580163_135581049_135581144_135581527
H1_mix_00091738	chrX	+	4436	16	NNC	ENSG00000198689.13	novel	4809	17	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	34.4140798059296	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTATGGGTTGGCAAAT	187	False	NA	NA	False	AATAAA	-23	NA	135985715	136047266	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_135985828_135994785_135994986_135998107_135998186_135998481_135998559_135998855_135998969_136002107_136002214_136010441_136010585_136012948_136013055_136013348_136013438_136016644_136016759_136022585_136022698_136024329_136024484_136030131_136030163_136033413_136033494_136040075_136040182_136044451
H1_mix_00091739	chrX	+	2181	6	FSM	ENSG00000022267.19	ENST00000618438.4	2178	6	-3	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	70.11019897276	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTCCTGTCTTTTCAT	-2	True	NA	18	True	AATAAA	-16	NA	136147532	136211354	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_136147629_136169906_136169981_136206406_136206589_136207015_136207191_136207791_136207962_136209870
H1_mix_00091741	chrX	+	7502	5	Fusion	ENSG00000283692.2_ENSG00000156925.12	novel	4001	3	NA	NA	11	0	multi-exon	FALSE	canonical	1	1	junction_3	243.772947637756	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGATTATTGTTTTA	9	False	NA	13	True	AATAAA	-14	NA	137566137	137577691	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chrX_+_137567752_137568901_137569066_137569890_137573623_137573968_137574120_137575850
H1_mix_00091742	chrX	+	3561	2	Intergenic	novelGene_1743	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGGTTGTATTACAAT	NA	False	NA	31	True	ATTAAA	-24	NA	138292841	138300102	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_138293052_138296751
H1_mix_00091743	chrX	+	395	2	FSM	ENSG00000203926.5	ENST00000370518.4	408	2	13	0	13	0	multi-exon	FALSE	canonical	3	10	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTGTATATCTCTGCC	12	False	NA	NA	False	AATAAA	-15	NA	141589720	141590762	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_141589840_141590486
H1_mix_00091744	chrX	+	1996	17	NIC	ENSG00000102081.16	novel	1774	17	NA	NA	5	30	combination_of_known_junctions	FALSE	canonical	3	20	junction_16	86.2278051152875	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTAATTTCTTGCACTTCT	12	True	NA	23	True	AATAAA	-14	NA	147911967	147948534	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_+_147912231_147921932_147921986_147925539_147925634_147928321_147928394_147928658_147928808_147929947_147930042_147930127_147930245_147932424_147932596_147932684_147932764_147936503_147936614_147937465_147937601_147938098_147938162_147940575_147940663_147943130_147943327_147944943_147945052_147945533_147945617_147948412
H1_mix_00091745	chrX	+	1846	16	FSM	ENSG00000102081.16	ENST00000616382.5	2799	16	-25	978	3	30	multi-exon	FALSE	canonical	3	20	junction_15	69.5498542214304	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTAATTTCTTGCACTTCT	11	False	NA	23	True	AATAAA	-14	NA	147912054	147948534	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_147912231_147921932_147921986_147925539_147925634_147928321_147928394_147928658_147928808_147929947_147930042_147930127_147930245_147932424_147932596_147932684_147932764_147936503_147936614_147937465_147937601_147940575_147940663_147943130_147943327_147944943_147945052_147945533_147945617_147948412
H1_mix_00091749	chrX	+	3162	2	Fusion	ENSG00000269993.1_ENSG00000102195.10	novel	2020	2	NA	NA	974	1	multi-exon	FALSE	canonical	2	8	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGGTTTGTGGATAAT	740	False	NA	10	True	ATTAAA	-23	NA	151177557	151182856	H1_mix_long_short	iso_detect_ref_jhu_pertea	Fusion_chrX_+_151177634_151179770
H1_mix_00091752	chrX	+	1602	9	NNC	ENSG00000268089.3	novel	6468	9	NA	NA	-7	1415	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_8	10.51115478908	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCACCAGACAATGGCTAA	-15	True	NA	2	True	AATAAA	-21	NA	152637887	152658957	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_152638352_152640377_152640467_152645526_152645595_152646947_152647169_152649250_152649334_152649741_152649880_152650427_152650581_152651525_152651783_152658828
H1_mix_00091753	chrX	+	4422	23	NNC	ENSG00000147394.19	novel	4328	23	NA	NA	-16396	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_12	16.9863824895899	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTGTCAGTGTTAAAGT	4	True	NA	13	True	AATAAA	-13	NA	152898045	152973471	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_152898239_152914444_152914524_152914709_152914834_152915137_152915204_152917130_152917170_152917284_152917363_152918064_152918155_152918982_152919082_152920327_152920412_152920706_152920749_152922172_152922257_152922719_152922810_152931671_152931777_152932872_152932972_152938073_152938164_152945266_152945465_152959698_152959897_152963838_152963950_152965446_152965528_152967166_152967239_152969381_152969485_152970442_152970542_152971273
H1_mix_00091754	chrX	+	4479	24	NNC	ENSG00000147394.19	novel	4328	23	NA	NA	-16364	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_12	15.2419677318995	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCAGTGTTAAAGTTT	6	True	NA	15	True	AATAAA	-15	NA	152898077	152973473	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_+_152898239_152914444_152914524_152914709_152914834_152915137_152915204_152917130_152917170_152917284_152917363_152918064_152918155_152918982_152919082_152920327_152920412_152920706_152920749_152922172_152922257_152922719_152922810_152928574_152928662_152931671_152931777_152932872_152932972_152938073_152938164_152945266_152945465_152959698_152959897_152963838_152963950_152965446_152965528_152967166_152967239_152969381_152969485_152970442_152970542_152971273
H1_mix_00091757	chrX	+	1284	4	FSM	ENSG00000102119.12	ENST00000486738.5	1284	4	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_2	39.9694327649962	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCAGGGGCAGGGGCTTT	-41	True	NA	NA	False	NA	NA	NA	154379340	154381279	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_+_154379567_154379689_154379795_154379941_154380368_154380752
H1_mix_00091764	chrX	+	1545	9	ISM	ENSG00000182484.15	ENST00000359512.8	1437	10	716	-292	0	0	3prime_fragment	FALSE	canonical	3	52	junction_3	62.7076550350912	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACAGTGTGCTTTTAATA	NA	False	NA	NA	False	AATAAA	-15	NA	156021676	156025666	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_156021793_156021998_156022146_156022322_156022460_156022698_156022835_156023011_156023214_156023301_156023461_156024119_156024273_156025031_156025101_156025240
H1_mix_00091765	chrX	+	1445	2	ISM	ENSG00000182484.15	ENST00000492963.6	3187	6	2394	0	11	0	3prime_fragment	FALSE	canonical	3	214	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACAGTGTGCTTTTAATA	33	False	NA	NA	False	AATAAA	-15	NA	156024081	156025666	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_+_156025101_156025240
H1_mix_00091766	chrX	-	2154	14	NIC	ENSG00000167393.18	novel	2378	13	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	4	junction_13	159.283417531743	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGTTGATTGCCGCTGTG	27	True	NA	-8	True	GATAAA	-20	NA	386907	334234	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_334518_338603_338711_338777_338897_340764_340941_341306_341397_341882_341932_345515_345673_346173_346261_346700_346776_347233_347337_347589_347694_361404_361591_362254_362333_386367
H1_mix_00091769	chrX	-	3863	5	NNC	ENSG00000169100.14	novel	1451	4	NA	NA	0	3538	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	2040.98432135085	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAAATTACACAGGCATCTC	55	False	NA	9	True	AATAAA	-38	NA	1392088	1382613	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_1382862_1383962_1386760_1387278_1387420_1389240_1389728_1391898
H1_mix_00091770	chrX	-	2744	7	NIC	ENSG00000169084.15	novel	2579	7	NA	NA	0	-6	combination_of_known_splicesites	FALSE	canonical	3	29	junction_5	122.918333322034	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATCATTCATCCTCCG	2247	False	NA	NA	False	AATAAA	-24	NA	2500589	2219511	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_2221230_2243022_2243231_2266739_2266948_2291501_2291604_2392353_2392475_2425196_2425305_2500310
H1_mix_00091771	chrX	-	1714	8	NIC	ENSG00000169084.15	novel	2579	7	NA	NA	7	-1159	combination_of_known_junctions	FALSE	canonical	3	27	junction_5	114.307497923945	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGATGAGGTCTCCT	2193	False	NA	48	True	GGGGCT	-22	NA	2500643	2220664	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_2221230_2243022_2243231_2266739_2266948_2291501_2291604_2392353_2392475_2408744_2408814_2425196_2425305_2500310
H1_mix_00091772	chrX	-	1491	6	NIC	ENSG00000169084.15	novel	2579	7	NA	NA	7	-1159	combination_of_known_splicesites	FALSE	canonical	3	19	junction_3	110.287986653126	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGATGAGGTCTCCT	2193	False	NA	48	True	GGGGCT	-22	NA	2500643	2220664	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_2221230_2243022_2243231_2266739_2266948_2408744_2408814_2425196_2425305_2500310
H1_mix_00091773	chrX	-	4631	2	NIC	ENSG00000214717.12	novel	4507	2	NA	NA	-29	1	intron_retention	FALSE	canonical	3	24	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCGTGTCCGTCTGGACT	2252	False	NA	-6	True	AATAAA	-36	NA	2500584	2486412	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_2490770_2500310
H1_mix_00091774	chrX	-	5912	8	NIC	ENSG00000183943.6	novel	6102	9	NA	NA	40	-30	combination_of_known_splicesites	FALSE	canonical	3	14	junction_5	55.2548825065833	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGAGTTTCATCTGCTTC	16	True	NA	-4	True	AATAAA	-20	NA	3713609	3604369	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_3608946_3612176_3612326_3615814_3615893_3621258_3621317_3626418_3626515_3655148_3655413_3674597_3674767_3713087
H1_mix_00091775	chrX	-	2835	8	NIC	ENSG00000183943.6	novel	669	7	NA	NA	6	1081	combination_of_known_splicesites	FALSE	canonical	3	14	junction_5	65.8700018434579	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCTCTGAGGAAGCATGT	-18	True	NA	-8	True	AATAAA	-22	NA	3713643	3609869	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_3611335_3612176_3612326_3615814_3615893_3621258_3621317_3626418_3626515_3655148_3655413_3674597_3674767_3713087
H1_mix_00091776	chrX	-	1921	5	NIC	ENSG00000285756.2	novel	3629	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	29.6173513332979	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTGTGTGCTGGTTGGTC	52	False	NA	-4	True	ATTAAA	-25	NA	3843857	3817527	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_3817779_3818441_3818501_3822373_3822581_3828505_3829393_3843340
H1_mix_00091777	chrX	-	2194	7	NIC	ENSG00000285756.2	novel	3629	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	28.9635786616379	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTGTGTGCTGGTTGGTC	52	False	NA	-4	True	ATTAAA	-25	NA	3843857	3817527	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_3817779_3818441_3818501_3822373_3822581_3825087_3825232_3826600_3826730_3828505_3829393_3843340
H1_mix_00091778	chrX	-	2610	8	NNC	ENSG00000285756.2	novel	3629	13	NA	NA	-253	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	26.1393440262461	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTGTGTGCTGGTTGGTC	NA	False	NA	-4	True	ATTAAA	-25	NA	3844110	3817527	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_3817779_3818441_3818501_3818656_3818704_3822373_3822581_3825087_3825232_3826484_3826730_3828505_3829393_3843340
H1_mix_00091779	chrX	-	4265	6	NNC	ENSG00000285756.2	novel	2427	4	NA	NA	36	497	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	39.2295806758115	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGGAACCAAAAGGTCTCA	NA	False	NA	NA	False	AATAAA	-19	NA	3920710	3890940	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_3893352_3899215_3899423_3901927_3902072_3903440_3903570_3905375_3906233_3920193
H1_mix_00091780	chrX	-	3171	4	NNC	ENSG00000285756.2	novel	2427	4	NA	NA	297	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	50.6907837338855	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGAAAGTAGCCTCCACT	NA	False	NA	NA	False	ATTAAA	-10	NA	3920449	3891437	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_3893352_3901927_3902072_3905375_3906233_3920193
H1_mix_00091781	chrX	-	2788	4	NNC	ENSG00000285756.2	novel	2427	4	NA	NA	8	-4061	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	47.77958652907	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGAGGGTCTTTCTCTT	NA	False	NA	NA	False	TATAAA	-15	NA	3920738	3897352	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_3899423_3901927_3902072_3906203_3906233_3920193
H1_mix_00091782	chrX	-	1943	2	FSM	ENSG00000285756.2	ENST00000381105.2	2118	2	175	0	175	0	multi-exon	FALSE	canonical	3	13	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGAAAGTAGCCTCCACT	NA	False	NA	NA	False	ATTAAA	-10	NA	3937680	3929868	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_3931783_3937651
H1_mix_00091783	chrX	-	3475	3	Antisense	novelGene_ENSG00000101846.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	5	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACAGAACAAGGCTCTGT	NA	False	NA	NA	False	AATGAA	-24	NA	7769174	7737874	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chrX_-_7741211_7743825_7743852_7769061
H1_mix_00091784	chrX	-	321	3	Antisense	novelGene_ENSG00000101846.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	9.5	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGTTTAGTCTCTTGA	NA	False	NA	NA	False	NA	NA	NA	7769157	7741907	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chrX_-_7742107_7743825_7743852_7769061
H1_mix_00091785	chrX	-	1925	8	NNC	ENSG00000006757.12	novel	3342	7	NA	NA	-643	7140	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	61.4903343989102	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATTGGCAGAATAAATGC	NA	False	NA	NA	False	NA	NA	NA	7928382	7891106	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_7891134_7900659_7900818_7901988_7902142_7912027_7912094_7921712_7921849_7922003_7922099_7925939_7926133_7927285
H1_mix_00091786	chrX	-	704	3	FSM	ENSG00000011201.12	ENST00000488294.1	704	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	123.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGGATTTTCGCCCATA	NA	False	NA	0	True	AATAAA	-15	NA	8570650	8565805	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_8566213_8568231_8568377_8570498
H1_mix_00091787	chrX	-	1348	9	NIC	ENSG00000101850.13	novel	1645	9	NA	NA	8	-65	combination_of_known_junctions	FALSE	canonical	3	31	junction_8	42.4394789671127	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGCCTGACTTGGATTC	15	False	NA	-16	True	AATAAA	-17	NA	9786289	9725410	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_9725841_9739484_9739720_9741337_9741456_9743564_9743674_9746043_9746154_9748573_9748667_9759331_9759427_9760716_9760827_9786241
H1_mix_00091788	chrX	-	6191	11	NNC	ENSG00000101871.17	novel	6168	10	NA	NA	0	34134	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	40.7589254029102	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAAAATCATTTGATCTC	-11	True	NA	NA	False	NA	NA	NA	10620585	10411175	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_10411201_10445557_10449717_10454869_10455078_10459645_10459808_10469696_10469841_10474622_10474751_10482479_10482629_10495583_10495692_10523091_10523188_10566887_10567604_10620289
H1_mix_00091790	chrX	-	1365	2	NNC	ENSG00000101871.17	novel	6168	10	NA	NA	-10	-16223	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGAATTTGTCATCCTT	43	False	NA	NA	False	AATAAA	-15	NA	10620531	10582904	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_10584028_10620289
H1_mix_00091792	chrX	-	1682	5	FSM	ENSG00000046647.14	ENST00000380523.8	1682	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	52.6990275052586	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCCGGGCGCAATGGTTC	8	True	NA	NA	False	AATAAA	-20	NA	14029892	14008278	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_14009170_14020077_14020535_14021463_14021512_14026051_14026222_14029776
H1_mix_00091793	chrX	-	2786	3	ISM	ENSG00000181544.15	ENST00000452869.1	2712	10	3	19287	3	2363	5prime_fragment	FALSE	canonical	3	76	junction_2	11	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGAATTGTCTTTTTCCA	4	True	NA	NA	False	TTTAAA	-29	NA	14873049	14862979	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_14865581_14868922_14869044_14872985
H1_mix_00091796	chrX	-	446	3	FSM	ENSG00000130234.13	ENST00000473851.1	786	3	340	0	-82	0	multi-exon	FALSE	canonical	1	2	junction_1	1	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATTTTGTTGTATGTAAA	5432	False	NA	NA	False	NA	NA	NA	15566369	15561879	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_15562014_15564023_15564219_15566252
H1_mix_00091807	chrX	-	916	8	FSM	ENSG00000184831.14	ENST00000490078.2	916	8	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_5	114.352480497444	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTTAAAAAAAAAAATCCGAT	18	True	NA	-18	True	ATTAAA	-7	NA	23907903	23833366	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_23833511_23840312_23840378_23856301_23856383_23858641_23858734_23868592_23868689_23878914_23879035_23880844_23880953_23907693
H1_mix_00091808	chrX	-	729	1	FSM	ENSG00000238103.4	ENST00000330965.4	580	1	-28	-121	-28	121	mono-exon	FALSE	NA	NA	NA	NA	NA	16471	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGCTGGGGCTGGGCGTGG	3	True	NA	NA	False	AATAAA	-40	NA	23837349	23836620	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_23836600_23837300
H1_mix_00091809	chrX	-	6267	4	FSM	ENSG00000174010.10	ENST00000689334.1	6282	4	14	1	14	0	multi-exon	FALSE	canonical	2	8	junction_3	12.657891697365	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTTCTTTATCTCTGAT	3	True	NA	NA	False	AATAAA	-20	NA	24025671	23983719	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_23989031_24005988_24006701_24024856_24025059_24025629
H1_mix_00091810	chrX	-	468	2	Genic_Genomic	ENSG00000225071.1	novel	348	1	NA	NA	0	93419	multi-exon	FALSE	non_canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGGAGTTGTTGCCCC	23	False	NA	NA	False	NA	NA	NA	24429920	24336153	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chrX_-_24336191_24429489
H1_mix_00091811	chrX	-	478	2	Genic_Genomic	ENSG00000225071.1	novel	348	1	NA	NA	-11	93419	multi-exon	FALSE	non_canonical	0	0	junction_1	0	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGGAGTTGTTGCCCC	12	False	NA	NA	False	NA	NA	NA	24429931	24336153	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chrX_-_24336190_24429489
H1_mix_00091812	chrX	-	1767	1	FSM	ENSG00000232472.1	ENST00000447718.1	678	1	-861	-228	-861	228	mono-exon	FALSE	NA	NA	NA	NA	NA	7718	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTGAATTTTGTCAAATG	NA	False	NA	NA	False	NA	NA	NA	24789930	24788163	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_24788200_24789900
H1_mix_00091813	chrX	-	3725	8	FSM	ENSG00000198947.18	ENST00000679437.1	3711	8	0	-14	0	14	multi-exon	FALSE	canonical	3	27	junction_7	8.39825054668518	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTTTGTTTTTATTTTAA	46	False	NA	NA	False	AATAAA	-41	NA	31178178	31119204	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_31121931_31134101_31134195_31146290_31146415_31147274_31147519_31169442_31169602_31172347_31172414_31173538_31173605_31177931
H1_mix_00091814	chrX	-	296	1	FSM	ENSG00000198947.18	ENST00000634285.1	671	1	335	40	335	-40	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCTTTGAAATAAAGATTCC	5512	False	NA	NA	False	GATAAA	-25	NA	31261443	31261147	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_31261100_31261400
H1_mix_00091815	chrX	-	1839	9	FSM	ENSG00000101955.15	ENST00000544439.5	1842	9	0	3	0	0	multi-exon	FALSE	canonical	0	0	junction_8	18.1654720555234	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTAGAACTCACTTTGT	NA	False	NA	0	True	AATAAA	-21	NA	38220924	38149338	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_38149895_38154461_38154584_38156895_38157030_38160016_38160197_38160932_38161055_38164768_38164896_38171880_38172058_38174159_38174352_38220695
H1_mix_00091816	chrX	-	6284	14	NIC	ENSG00000183337.18	novel	6196	15	NA	NA	-116	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_13	54.6970137540384	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCTTGTGTCCCATGTAT	1253	False	NA	-2	True	AATAAA	-27	NA	40096728	40051245	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_40052401_40053885_40054043_40054255_40054334_40055367_40055514_40057154_40057322_40062138_40062394_40062745_40063072_40063607_40063851_40064335_40064600_40070972_40071160_40072348_40075181_40076453_40076533_40077843_40077970_40096459
H1_mix_00091817	chrX	-	6748	14	NIC	ENSG00000183337.18	novel	6258	15	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_10	45.3577495450004	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCTTGTGTCCCATGTAT	34	False	NA	-2	True	AATAAA	-27	NA	40097947	40051245	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_40052401_40053885_40054043_40054255_40054334_40055367_40055514_40057154_40057322_40062138_40062394_40062745_40063072_40063607_40063851_40064335_40064600_40070972_40071160_40072348_40075181_40076453_40076533_40077843_40077970_40097214
H1_mix_00091818	chrX	-	6333	15	NIC	ENSG00000183337.18	novel	6563	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_14	48.1678612473385	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCTTGTGTCCCATGTAT	0	True	NA	-2	True	AATAAA	-27	NA	40146629	40051245	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_40052401_40053885_40054043_40054255_40054334_40055367_40055514_40057154_40057322_40062138_40062394_40062745_40063072_40063607_40063953_40064335_40064600_40070972_40071160_40071636_40071691_40072348_40075181_40076453_40076533_40077843_40077970_40146467
H1_mix_00091819	chrX	-	479	2	NNC	ENSG00000183337.18	novel	288	2	NA	NA	61	-66685	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGCATGTGTCTTTGGT	61	False	NA	0	True	AATAAA	-21	NA	40146568	40144528	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_40144907_40146467
H1_mix_00091820	chrX	-	6461	31	NIC	ENSG00000180182.11	novel	7996	31	NA	NA	103	14	combination_of_known_junctions	FALSE	canonical	3	25	junction_30	92.641489385456	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAATTTTGATGAAGATGT	-13	True	NA	1	True	AATAAA	-41	NA	40735755	40649528	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_40651880_40654363_40654557_40654934_40655061_40659226_40659335_40659427_40659608_40662924_40663161_40664306_40664490_40666719_40666852_40671860_40671973_40675220_40675362_40679863_40680134_40680757_40680911_40681851_40681944_40682602_40682750_40682835_40682997_40688453_40688531_40692182_40692318_40692707_40692903_40697023_40697184_40701164_40701244_40703443_40703570_40709347_40709460_40709978_40710130_40711168_40711302_40712185_40712294_40712913_40713043_40713777_40713908_40714536_40714711_40726745_40726852_40729318_40729346_40735721
H1_mix_00091821	chrX	-	272	1	FSM	ENSG00000232801.1	ENST00000419629.1	891	1	599	20	599	-20	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACACCATTTCTGAGGTT	NA	False	NA	NA	False	NA	NA	NA	40890938	40890666	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_40890700_40890900
H1_mix_00091822	chrX	-	4809	26	NIC	ENSG00000147044.23	novel	6048	26	NA	NA	-11	279	combination_of_known_junctions	FALSE	canonical	3	15	junction_24	62.3677609025689	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGCTTTAGAGACATTA	105	False	NA	NA	False	NA	NA	NA	41923528	41518931	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_41520597_41523950_41524035_41531006_41531210_41534705_41534787_41534892_41534974_41542690_41542807_41553718_41553916_41555599_41555636_41557031_41557101_41559778_41559848_41561558_41561645_41569667_41569747_41578339_41578529_41586906_41586988_41589514_41589593_41609903_41610026_41626603_41626704_41636577_41636662_41660438_41660562_41665276_41665453_41671427_41671531_41739383_41739457_41745523_41745602_41787177_41787284_41853096_41853228_41922929
H1_mix_00091823	chrX	-	770	1	FSM	ENSG00000214018.3	ENST00000426279.1	1163	1	335	58	335	-58	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGGAGTGGTGTCAAGTC	4182	False	NA	NA	False	NA	NA	NA	44310141	44309371	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_44309400_44310100
H1_mix_00091824	chrX	-	10664	17	FSM	ENSG00000065923.10	ENST00000328306.4	3838	17	0	-6826	0	759	multi-exon	TRUE	canonical	0	0	junction_10	12.1679330105815	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCCACAGTCTTCATATT	155	False	NA	NA	False	AATATA	-6	NA	46759055	46598491	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_46607204_46613288_46613395_46620976_46621060_46631585_46631650_46635588_46635649_46643235_46643390_46648685_46648798_46651109_46651224_46651315_46651405_46653608_46653724_46662027_46662158_46662537_46662644_46669606_46669720_46672550_46672628_46679677_46679756_46682335_46682536_46758704
H1_mix_00091827	chrX	-	4999	5	FSM	ENSG00000147124.13	ENST00000684689.1	4999	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	11.9268604418766	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGATGAAGTGTCTGTT	-20	True	NA	NA	False	NA	NA	NA	47483222	47445177	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_47449475_47455920_47456017_47456271_47456399_47467409_47467761_47483094
H1_mix_00091828	chrX	-	688	6	FSM	ENSG00000008056.14	ENST00000639776.1	688	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	29.9933325924279	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATTTCCAATATCGTAT	6736	False	NA	-5	True	ATTAAA	-21	NA	47619387	47589954	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_47590210_47604977_47605068_47605222_47605380_47606944_47607037_47607140_47607199_47619351
H1_mix_00091829	chrX	-	3617	7	NNC	ENSG00000147118.12	novel	3586	7	NA	NA	7	-4	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	21.6384431561566	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTATTTTGTTTTACTGTT	10	True	NA	-6	True	AATAAA	-11	NA	48003971	47974855	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_47977798_47982948_47983039_47983284_47983412_47988523_47988660_48002594_48002654_48003507_48003703_48003903
H1_mix_00091830	chrX	-	2791	5	FSM	ENSG00000221994.12	ENST00000442455.8	2791	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4.54835134966506	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTGTTGTTTGGTCAT	-18	True	NA	0	True	AATAAA	-24	NA	48071658	48058213	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48060200_48060449_48060546_48060818_48060946_48066871_48067062_48071266
H1_mix_00091831	chrX	-	1277	8	FSM	ENSG00000269791.6	ENST00000595235.6	1278	8	0	1	0	-1	multi-exon	FALSE	canonical	2	2	junction_3	4.53107186490106	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGTTGTTTGCATCTCT	NA	False	NA	NA	False	AATAAA	-15	NA	48411960	48402082	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48402670_48403451_48403557_48405943_48406080_48408064_48408115_48409977_48410074_48410749_48410865_48411303_48411393_48411861
H1_mix_00091832	chrX	-	1953	16	NIC	ENSG00000017483.16	novel	1990	17	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_15	73.0593061986098	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGACTCAGCCTTCTGA	1822	False	NA	-12	True	AATAAA	-16	NA	48468448	48458543	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_48459035_48459535_48459640_48459731_48459877_48460648_48460765_48460985_48461087_48461717_48461798_48462006_48462145_48462232_48462292_48462897_48462981_48466014_48466094_48466229_48466323_48466798_48466873_48466961_48467078_48467709_48467786_48467871_48467926_48468304
H1_mix_00091833	chrX	-	1975	17	NIC	ENSG00000017483.16	novel	1990	17	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_16	81.2792255130424	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGACTCAGCCTTCTGA	677	False	NA	-12	True	AATAAA	-16	NA	48469593	48458543	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_48459035_48459535_48459640_48459731_48459877_48460648_48460765_48460985_48461087_48461717_48461798_48462006_48462145_48462232_48462292_48462897_48462981_48466014_48466094_48466229_48466323_48466798_48466873_48466961_48467078_48467709_48467786_48467871_48467926_48469334_48469437_48469529
H1_mix_00091838	chrX	-	2740	9	FSM	ENSG00000068308.15	ENST00000156084.8	2740	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	114.948629830894	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGCGACTCTGTTCTGT	-39	True	NA	-6	True	AATAAA	-17	NA	48957631	48922210	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_48923296_48923632_48923747_48923850_48924053_48925846_48926051_48934463_48934613_48934695_48934868_48934953_48935019_48944189_48944284_48956976
H1_mix_00091839	chrX	-	2110	6	NNC	ENSG00000102057.10	novel	4718	6	NA	NA	13	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	14.4	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAGGACTGAGAGTATCT	18	True	NA	-13	True	AATAAA	-14	NA	48971831	48961384	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_48962807_48966054_48966306_48966577_48966677_48966760_48966845_48966943_48967107_48971740
H1_mix_00091840	chrX	-	684	2	FSM	ENSG00000068323.17	ENST00000495940.2	758	2	74	0	74	0	multi-exon	FALSE	canonical	3	217	junction_1	0	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTCAAGCCAGAGCAGCT	NA	False	NA	NA	False	NA	NA	NA	49031993	49030514	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_49030602_49031396
H1_mix_00091841	chrX	-	2601	9	FSM	ENSG00000196998.19	ENST00000465806.6	2610	9	0	9	0	0	multi-exon	FALSE	canonical	3	5	junction_8	66.2589616580278	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACGGCTTGACCTCAGGG	-8	True	NA	-16	True	AATAAA	-16	NA	49080097	49074441	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_49074913_49075135_49075282_49075363_49075466_49075544_49075754_49075865_49075946_49076429_49076525_49076644_49077912_49078040_49078113_49079938
H1_mix_00091844	chrX	-	1769	12	NNC	ENSG00000068394.11	novel	1658	11	NA	NA	-765	18	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	43.8568294294436	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAAGTGGTATGATGAGC	NA	False	NA	-4	True	AATAAA	-33	NA	49124500	49113388	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_49113756_49113852_49113939_49115725_49115796_49115890_49116015_49116220_49116324_49117029_49117163_49117596_49117811_49119704_49119815_49122397_49122523_49122621_49122777_49123546_49123756_49124427
H1_mix_00091845	chrX	-	2730	6	FSM	ENSG00000147081.15	ENST00000376064.7	2864	6	124	10	110	-10	multi-exon	FALSE	canonical	0	0	junction_1	0.4	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAATAATAAATGTGTC	784	False	NA	NA	False	AATAAA	-8	NA	50200248	50190786	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_50191116_50192303_50194437_50196890_50196993_50197543_50197595_50198656_50198753_50200229
H1_mix_00091846	chrX	-	11428	4	ISM	ENSG00000158352.18	ENST00000460112.3	8919	8	35499	-5573	-11947	4	3prime_fragment	FALSE	canonical	2	6	junction_3	2.49443825784929	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTCCATAGGATTTGTG	NA	False	NA	NA	False	AATAAA	-19	NA	50608184	50586791	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_50596965_50598265_50598536_50602632_50602814_50607380
H1_mix_00091847	chrX	-	2432	14	NIC	ENSG00000187243.17	novel	2513	13	NA	NA	-6	-3	intron_retention	TRUE	canonical	3	76	junction_11	392.583266711376	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTGGATGTTTCTTCCT	40	False	NA	NA	False	ATTAAA	-11	NA	52069189	52061829	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_52062039_52062233_52062665_52062986_52063102_52064046_52064110_52064500_52064544_52064628_52064709_52065329_52065422_52065809_52065890_52066082_52066147_52066249_52066454_52066864_52067402_52067485_52067699_52067962_52068204_52069129
H1_mix_00091848	chrX	-	2199	4	FSM	ENSG00000268350.8	ENST00000619586.5	2188	4	0	-11	0	11	multi-exon	FALSE	canonical	2	3	junction_3	71.331775683928	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGGTTTGTTCCTCAGTA	1220	False	NA	NA	False	AATAAA	-31	NA	52957247	52947242	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_52948706_52955153_52955247_52956272_52956756_52957087
H1_mix_00091849	chrX	-	1858	4	FSM	ENSG00000268350.8	ENST00000619373.5	1869	4	22	-11	22	11	multi-exon	FALSE	canonical	2	6	junction_3	69.9539531088527	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGGTTTGTTCCTCAGTA	NA	False	NA	NA	False	AATAAA	-31	NA	52958851	52947242	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_52948706_52955153_52955247_52956272_52956347_52958623
H1_mix_00091851	chrX	-	556	1	FSM	ENSG00000231340.1	ENST00000428275.1	1082	1	88	438	88	-438	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGCCCTGGACTTCGAGCA	NA	False	NA	NA	False	NA	NA	NA	53143825	53143269	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53143300_53143800
H1_mix_00091852	chrX	-	5719	26	NNC	ENSG00000126012.13	novel	5810	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_5	41.303636643763	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTCTGAAGTGCATTT	13	True	NA	-4	True	AATAAA	-25	NA	53225194	53192157	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_53193333_53193436_53193637_53193772_53193852_53194138_53194739_53194930_53195069_53195308_53195411_53195915_53196055_53196685_53197045_53197770_53197877_53198489_53198638_53198763_53198889_53198976_53199159_53201549_53201745_53201853_53201974_53210413_53210577_53210675_53210858_53211496_53211656_53211786_53211907_53214688_53214848_53215794_53215977_53216073_53216198_53217142_53217278_53217795_53217967_53218275_53218399_53220838_53220917_53224739
H1_mix_00091853	chrX	-	5903	27	NIC	ENSG00000126012.13	novel	5810	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_26	52.4568151494284	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTCTGAAGTGCATTT	13	True	NA	-4	True	AATAAA	-25	NA	53225194	53192157	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_53193333_53193436_53193637_53193772_53193852_53194138_53194739_53194930_53195069_53195230_53195411_53195915_53196055_53196685_53197045_53197770_53197877_53198489_53198638_53198763_53198889_53198976_53199159_53201549_53201745_53201853_53201974_53210413_53210577_53210675_53210858_53211496_53211656_53211786_53211907_53214688_53214848_53215794_53215977_53216073_53216198_53217142_53217278_53217795_53217967_53218275_53218399_53220838_53220917_53221687_53221794_53224739
H1_mix_00091854	chrX	-	5606	26	NNC	ENSG00000126012.13	novel	5245	26	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_5	39.4841943060764	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGCAAAACAAGAAACT	13	True	NA	13	True	AATAAA	-42	NA	53225194	53192261	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_53193333_53193436_53193637_53193781_53193852_53194138_53194739_53194930_53195069_53195308_53195411_53195915_53196055_53196685_53197045_53197770_53197877_53198489_53198638_53198763_53198889_53198976_53199159_53201549_53201745_53201853_53201974_53210413_53210577_53210675_53210858_53211496_53211656_53211786_53211907_53214688_53214848_53215794_53215977_53216073_53216198_53217142_53217278_53217795_53217967_53218275_53218399_53220838_53220917_53224739
H1_mix_00091856	chrX	-	1323	5	FSM	ENSG00000124313.18	ENST00000640005.1	1323	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	8.49632273398321	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAGTCTCAGAGTTAGAT	9450	False	NA	NA	False	ACTAAA	-36	NA	53241861	53231061	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_53231871_53236321_53236496_53238144_53238307_53239194_53239295_53241783
H1_mix_00091857	chrX	-	1600	3	NIC	ENSG00000124313.18	novel	475	3	NA	NA	74	0	intron_retention	FALSE	canonical	2	7	junction_1	14.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGATGTATATTCCACC	148	False	NA	-2	True	AATAAA	-18	NA	53321245	53266323	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_53267065_53291894_53291925_53320416
H1_mix_00091858	chrX	-	14356	85	NNC	ENSG00000086758.16	novel	14796	83	NA	NA	21	76252	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	190.746351192355	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGGCGCAGTGGCTCAC	5	True	NA	NA	False	NA	NA	NA	53684148	53455843	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_53455870_53532789_53533412_53534006_53534198_53534515_53534698_53535383_53535502_53536146_53536253_53536379_53536668_53537555_53537697_53538336_53538455_53538834_53539081_53539656_53539813_53542442_53542540_53543840_53543969_53544559_53544763_53545028_53545162_53546435_53546593_53546703_53546826_53547672_53548274_53548958_53549506_53550665_53550769_53550900_53551190_53551265_53551481_53552310_53552442_53552637_53552894_53554632_53554921_53557381_53557428_53558654_53558810_53558970_53559061_53559353_53559533_53560187_53560417_53561755_53561925_53562110_53562245_53562830_53562930_53563745_53563822_53564573_53564723_53565066_53565240_53568691_53568875_53569615_53569828_53573749_53573965_53575154_53575222_53575642_53575789_53576899_53577068_53580830_53581027_53583557_53583917_53584185_53584346_53585011_53585189_53586489_53586572_53586781_53586910_53588381_53588535_53589546_53589817_53590403_53590500_53590999_53591123_53592397_53592629_53593363_53593602_53594498_53594622_53595186_53595404_53600117_53600310_53602563_53602659_53603367_53603502_53604588_53604835_53607522_53607700_53608851_53608910_53614533_53614746_53615743_53615836_53616969_53617148_53617339_53617447_53624594_53624676_53625156_53625259_53625785_53626035_53627409_53627516_53627738_53627880_53628492_53628621_53628751_53628903_53629515_53629617_53630934_53631035_53631413_53631483_53631566_53631615_53632486_53632565_53634235_53634299_53645310_53645464_53647367_53647575_53648211_53648311_53654062_53654132_53680048_53680187_53683873
H1_mix_00091859	chrX	-	14315	85	NNC	ENSG00000086758.16	novel	14796	83	NA	NA	21	66151	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	190.625442641024	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGGAAGGAAGGAAAAAG	5	True	NA	NA	False	NA	NA	NA	53684148	53465944	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_53465975_53532789_53533412_53534006_53534198_53534515_53534698_53535383_53535502_53536146_53536253_53536379_53536668_53537555_53537697_53538336_53538455_53538834_53539081_53539656_53539813_53542442_53542540_53543885_53543969_53544559_53544763_53545028_53545162_53546435_53546593_53546703_53546826_53547672_53548274_53548958_53549506_53550665_53550769_53550900_53551190_53551265_53551481_53552310_53552442_53552637_53552894_53554632_53554921_53557381_53557428_53558654_53558810_53558970_53559061_53559353_53559533_53560187_53560417_53561755_53561925_53562110_53562245_53562830_53562930_53563745_53563822_53564573_53564723_53565066_53565240_53568691_53568875_53569615_53569828_53573749_53573965_53575154_53575222_53575642_53575789_53576899_53577068_53580830_53581027_53583557_53583917_53584185_53584346_53585011_53585189_53586489_53586572_53586781_53586910_53588381_53588535_53589546_53589817_53590403_53590500_53590999_53591123_53592397_53592629_53593363_53593602_53594498_53594622_53595186_53595404_53600117_53600310_53602563_53602659_53603367_53603502_53604588_53604835_53607522_53607700_53608851_53608910_53614533_53614746_53615743_53615836_53616969_53617148_53617339_53617447_53624594_53624676_53625156_53625259_53625785_53626035_53627409_53627516_53627738_53627880_53628492_53628621_53628751_53628903_53629515_53629617_53630934_53631035_53631413_53631483_53631566_53631615_53632486_53632565_53634235_53634299_53645310_53645464_53647367_53647575_53648211_53648311_53654062_53654132_53680048_53680187_53683873
H1_mix_00091860	chrX	-	3654	17	NIC	ENSG00000086758.16	novel	4805	18	NA	NA	208	-697	combination_of_known_splicesites	FALSE	canonical	3	13	junction_8	190.893939384544	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTTTTCACAATGGAGTT	NA	False	NA	-25	True	AATAAA	-17	NA	53549297	53532792	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_53533412_53534006_53534198_53534515_53534698_53535383_53535502_53536146_53536253_53536379_53536668_53537555_53537697_53538336_53538455_53539656_53539813_53542442_53542540_53543885_53543969_53544559_53544763_53545028_53545162_53546435_53546593_53546703_53546826_53547672_53548274_53548958
H1_mix_00091861	chrX	-	11140	58	NNC	ENSG00000086758.16	novel	14796	83	NA	NA	21643	-697	at_least_one_novel_splicesite	FALSE	canonical	2	55	junction_20	196.14018924765	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTTTTCACAATGGAGTT	NA	False	NA	-25	True	AATAAA	-17	NA	53603835	53532792	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_53533412_53534006_53534198_53534515_53534698_53535383_53535502_53536146_53536253_53536379_53536668_53537555_53537697_53538336_53538455_53538834_53539081_53539656_53539813_53542442_53542540_53543885_53543969_53544559_53544763_53545028_53545162_53546435_53546593_53546703_53546826_53547672_53548274_53548958_53549506_53550665_53550769_53550900_53551190_53551313_53551481_53552310_53552442_53552637_53552894_53554632_53554921_53557381_53557428_53558654_53558810_53558970_53559061_53559353_53559533_53560187_53560417_53561755_53561925_53562110_53562245_53562830_53562930_53563745_53563822_53564573_53564723_53565066_53565240_53568691_53568875_53569615_53569828_53573749_53573965_53575154_53575222_53575642_53575789_53576899_53577068_53580830_53581027_53583557_53583917_53584185_53584346_53585011_53585189_53586489_53586572_53586781_53586910_53588381_53588535_53589546_53589817_53590403_53590500_53590999_53591123_53592397_53592629_53593363_53593602_53594498_53594622_53595186_53595404_53600117_53600310_53602563_53602659_53603367
H1_mix_00091862	chrX	-	14351	85	NNC	ENSG00000086758.16	novel	14731	84	NA	NA	-3	-697	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_83	191.260573566885	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTTTTCACAATGGAGTT	-9	True	NA	-25	True	AATAAA	-17	NA	53686731	53532792	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_53533412_53534006_53534198_53534515_53534698_53535383_53535502_53536146_53536253_53536379_53536668_53537555_53537697_53538336_53538455_53538834_53539081_53539656_53539813_53542442_53542540_53543885_53543969_53544559_53544763_53545028_53545162_53546435_53546593_53546703_53546826_53547672_53548274_53548958_53549506_53550665_53550769_53550900_53551190_53551265_53551481_53552310_53552442_53552637_53552894_53554632_53554921_53557381_53557428_53558654_53558810_53558970_53559061_53559353_53559533_53560187_53560417_53561755_53561925_53562110_53562245_53562830_53562930_53563745_53563822_53564573_53564723_53565066_53565240_53568691_53568875_53569615_53569828_53573749_53573965_53575154_53575222_53575642_53575786_53576899_53577068_53580830_53581027_53583557_53583917_53584185_53584346_53585011_53585189_53586489_53586572_53586781_53586910_53588381_53588535_53589546_53589817_53590403_53590500_53590999_53591123_53592397_53592629_53593363_53593602_53594498_53594622_53595186_53595404_53600117_53600310_53602563_53602659_53603367_53603502_53604588_53604835_53607522_53607700_53608851_53608910_53614533_53614746_53615743_53615836_53616969_53617148_53617339_53617447_53624594_53624676_53625156_53625259_53625785_53626035_53627409_53627516_53627738_53627880_53628492_53628621_53628751_53628903_53629515_53629617_53630934_53631035_53631413_53631483_53631566_53631615_53632486_53632565_53634235_53634299_53645310_53645464_53647367_53647575_53648211_53648311_53654062_53654132_53680048_53680187_53686165_53686369_53686587
H1_mix_00091866	chrX	-	789	3	NNC	ENSG00000182518.14	novel	712	3	NA	NA	-7	40	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	137	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTATTTTTATTTTAC	15	True	NA	-26	True	AATAAA	-16	NA	55161109	55145897	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_55146312_55159128_55159229_55160834
H1_mix_00091868	chrX	-	4321	4	FSM	ENSG00000204271.13	ENST00000639888.1	4299	4	0	-22	0	0	multi-exon	FALSE	canonical	3	67	junction_1	1.4142135623731	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGAGTTTGACTCTTTT	-20	True	NA	-4	True	AATAAA	-15	NA	56995555	56975119	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_56978661_56984265_56984479_56994722_56994950_56995215
H1_mix_00091872	chrX	-	3233	3	NNC	ENSG00000235437.9	novel	2816	3	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	39	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTCTGTTCCGTTCTT	9	True	NA	-1	True	AATAAA	-17	NA	63561042	63426557	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_63428982_63432363_63432962_63560831
H1_mix_00091873	chrX	-	3105	5	FSM	ENSG00000235437.9	ENST00000662156.1	3088	5	0	-17	0	0	multi-exon	TRUE	canonical	2	9	junction_3	29.7856928742643	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTCTGTTCCGTTCTT	-24	True	NA	-1	True	AATAAA	-17	NA	63561075	63426557	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_63428982_63432363_63432492_63509943_63510080_63516909_63517083_63560831
H1_mix_00091877	chrX	-	8400	2	FSM	ENSG00000184675.11	ENST00000374869.8	8407	2	7	0	7	0	multi-exon	FALSE	canonical	1	2	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATGTGCATTCTTGTGGT	0	True	NA	-2	True	AATAAA	-32	NA	64205701	64185116	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_64193385_64205569
H1_mix_00091883	chrX	-	621	3	FSM	ENSG00000079482.14	ENST00000681520.1	621	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAGCAAACACATTCAAAA	621	False	NA	NA	False	AATAGA	-36	NA	68433211	68380492	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_68380912_68432866_68433025_68433167
H1_mix_00091884	chrX	-	735	1	FSM	ENSG00000233229.1	ENST00000429006.1	852	1	100	17	100	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAGCCAACAAGCAGTCA	NA	False	NA	NA	False	NA	NA	NA	69937917	69937182	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_69937200_69937900
H1_mix_00091885	chrX	-	1073	9	NNC	ENSG00000120509.11	novel	784	8	NA	NA	0	13380	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	160.881895734107	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATCCTTTCGGAAACTTC	7	True	NA	NA	False	NA	NA	NA	70289913	70273214	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_70273240_70286595_70287117_70287275_70287337_70287731_70287831_70288116_70288174_70288429_70288514_70289254_70289355_70289521_70289594_70289859
H1_mix_00091886	chrX	-	1033	8	NNC	ENSG00000120509.11	novel	784	8	NA	NA	0	13380	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	129.117886334267	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATCCTTTCGGAAACTTC	-25	True	NA	NA	False	NA	NA	NA	70289945	70273214	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_70273240_70286595_70287117_70287275_70287337_70287731_70287831_70288116_70288174_70288429_70288514_70289254_70289355_70289859
H1_mix_00091889	chrX	-	1764	7	NNC	ENSG00000147130.14	novel	1841	7	NA	NA	-101	0	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_6	38.4433204716878	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGCCTCAGCCTCTCCTT	18	True	NA	-3	True	AATAAA	-15	NA	71254676	71249203	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_71249680_71250025_71250204_71250431_71250727_71251177_71251245_71251557_71251602_71252588_71253275_71254658
H1_mix_00091890	chrX	-	934	8	NNC	ENSG00000198034.11	novel	1474	7	NA	NA	0	4942	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4527.84770242182	1105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATATACCAGAATATTTAT	7	True	NA	NA	False	NA	NA	NA	72277248	72250736	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_72250758_72272602_72272773_72273231_72273390_72273800_72273973_72275052_72275151_72275543_72275725_72276156_72276235_72277192
H1_mix_00091891	chrX	-	1392	8	NIC	ENSG00000147099.21	novel	1710	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	65.029349731722	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTTGTCCCGTTGTCTT	297	False	NA	-1	True	AATAAA	-16	NA	72572781	72329515	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_72330077_72351732_72351839_72462003_72462099_72464558_72464732_72567888_72568031_72568753_72568885_72572056_72572110_72572650
H1_mix_00091893	chrX	-	1865	12	FSM	ENSG00000147099.21	ENST00000648452.1	1865	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	70.1458928305267	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAAAATCTTTGAAAACC	-33	True	NA	-23	True	NA	NA	NA	72572865	72329537	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_72330077_72330657_72330769_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
H1_mix_00091896	chrX	-	4772	1	FSM	ENSG00000271533.1	ENST00000604070.1	3685	1	-1062	-25	-1062	25	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCGTTTATTGTTTTTCAA	5133	False	NA	1	True	AATAAA	-21	NA	74214722	74209950	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_74210000_74214700
H1_mix_00091897	chrX	-	3419	6	FSM	ENSG00000230590.12	ENST00000656041.1	3400	6	0	-19	0	19	multi-exon	FALSE	canonical	3	12	junction_1	20.4509168498627	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGTACTGGGATTGAGGC	1032	False	NA	NA	False	AATAAA	-39	NA	74292516	74245066	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_74247924_74274341_74274411_74280393_74280495_74280930_74281086_74281701_74281849_74292426
H1_mix_00091901	chrX	-	7689	19	NIC	ENSG00000085224.23	novel	5847	18	NA	NA	0	935	combination_of_known_junctions	FALSE	canonical	3	106	junction_11	86.2658824167226	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTACTTTCCCCCTAAG	NA	False	NA	NA	False	AATAAA	-8	NA	77634251	77503944	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_77508630_77520787_77520917_77521402_77521499_77522262_77522389_77523251_77523402_77557450_77557646_77558668_77558847_77574249_77574359_77589833_77589941_77593695_77593850_77595711_77595786_77599410_77599581_77599731_77599821_77600433_77600565_77616612_77616731_77618805_77618982_77620394_77620533_77633206_77633385_77633565
H1_mix_00091903	chrX	-	2967	2	FSM	ENSG00000085224.23	ENST00000493470.2	2967	2	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGTTCAAGCATTTAAT	732	False	NA	-1	True	AATAAA	-17	NA	77682141	77673953	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_77676299_77681519
H1_mix_00091906	chrX	-	5728	25	NIC	ENSG00000072133.11	novel	8465	22	NA	NA	17	-3038	combination_of_known_junctions	FALSE	canonical	0	0	junction_23	28.2795752266543	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTTTGGCTCAAAGGG	-4	True	NA	-6	True	AATAAA	-16	NA	84188182	84061387	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_84064403_84064970_84065112_84096193_84096312_84097771_84097849_84102036_84102199_84104498_84104658_84105786_84105877_84106364_84106488_84106909_84107041_84107622_84107726_84116228_84116288_84117059_84117149_84117383_84117455_84119884_84120028_84134781_84134820_84135103_84135211_84145477_84145558_84146977_84147059_84148041_84148124_84156074_84156192_84164327_84164388_84186060_84186171_84186762_84186875_84187363_84187460_84187818
H1_mix_00091909	chrX	-	3051	3	NNC	ENSG00000289479.1	novel	1764	2	NA	NA	-773	2121	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_1	64	53	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATAAGATATCGTCTGCT	-2	False	NA	NA	False	AATAAA	-18	NA	92105541	92098154	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_92100698_92103446_92103706_92105292
H1_mix_00091912	chrX	-	421	1	FSM	ENSG00000234322.1	ENST00000456632.1	1027	1	880	-274	880	274	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTAATTCTTATATTTT	NA	False	NA	NA	False	TTTAAA	-43	NA	93287879	93287458	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_93287500_93287900
H1_mix_00091913	chrX	-	3047	3	Intergenic	novelGene_1685	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	28	40	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATAGTTGAATGATTTA	NA	False	NA	-11	True	AATAAA	-16	NA	94702064	94565895	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_94568771_94697895_94698010_94702006
H1_mix_00091914	chrX	-	447	1	FSM	ENSG00000230592.2	ENST00000429844.2	889	1	443	-1	443	1	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTTCTTGCATGGGCTC	NA	False	NA	NA	False	NA	NA	NA	100156330	100155883	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_100155900_100156300
H1_mix_00091916	chrX	-	2553	19	FSM	ENSG00000010671.17	ENST00000308731.8	2575	19	20	2	20	-2	multi-exon	FALSE	canonical	0	0	junction_2	1.74977952755818	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTTTGGTATCTCTATT	12	True	NA	NA	False	AATAAA	-18	NA	101386171	101349451	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_101349957_101353193_101353352_101353869_101353989_101354629_101354695_101356051_101356269_101356783_101356956_101357508_101357584_101358309_101358438_101358616_101358697_101359292_101359348_101360087_101360151_101360567_101360756_101362172_101362241_101362560_101362690_101369997_101370080_101371632_101371702_101374535_101374635_101375143_101375315_101386061
H1_mix_00091918	chrX	-	2782	6	NNC	ENSG00000184867.14	novel	2819	6	NA	NA	12	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	118.838377639549	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGCTTGAATTTAAAACC	31	False	NA	4	True	AATAAA	-32	NA	101659818	101655273	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_101657716_101658072_101658143_101658460_101658526_101659075_101659149_101659430_101659502_101659757
H1_mix_00091919	chrX	-	2825	6	NIC	ENSG00000184867.14	novel	612	6	NA	NA	0	7	combination_of_known_junctions	FALSE	canonical	3	54	junction_2	114.794424951737	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGCTTGAATTTAAAACC	13	False	NA	4	True	AATAAA	-32	NA	101659836	101655273	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_101657716_101658072_101658143_101658491_101658570_101659075_101659149_101659418_101659502_101659757
H1_mix_00091923	chrX	-	3505	3	NIC	ENSG00000166432.16	novel	2654	10	NA	NA	-3359	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	4.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACATATTGTTTTATGTAA	3963	False	NA	-9	True	ATTAAA	-13	NA	101893580	101882292	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_101884822_101886631_101886732_101892704
H1_mix_00091925	chrX	-	1161	4	NNC	ENSG00000133134.12	novel	1077	3	NA	NA	0	7284	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	247.712647144944	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACACACACACAACCAGAGT	2	True	NA	NA	False	NA	NA	NA	103311007	103302061	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_103302087_103309346_103309982_103310357_103310434_103310582
H1_mix_00091926	chrX	-	1824	5	NNC	ENSG00000123562.18	novel	1866	4	NA	NA	0	6899	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	828.946771511899	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACATGCTATTGCTGTTT	1417	False	NA	NA	False	NA	NA	NA	103686684	103668596	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_103668621_103675497_103677052_103678498_103678601_103685170_103685261_103686630
H1_mix_00091928	chrX	-	745	3	NNC	ENSG00000288597.1	novel	4080	2	NA	NA	1628	-687	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	74	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTACCTAGTCTTTGGTT	9725	False	NA	NA	False	AATAAA	-15	NA	103766987	103750084	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_103750433_103764961_103765155_103766783
H1_mix_00091930	chrX	-	719	2	NNC	ENSG00000269743.3	novel	6207	2	NA	NA	44567	-2384	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATATATGTGATATTGTG	NA	False	NA	NA	False	AATAAA	-13	NA	104112421	104101597	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_104102211_104112315
H1_mix_00091931	chrX	-	3707	17	NNC	ENSG00000133131.15	novel	3798	17	NA	NA	-43	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	5	junction_13	6.35413251356942	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTAGGCTTGGATTTGA	119	False	NA	-2	True	AATAAA	-16	NA	107000121	106940737	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_106941633_106941937_106942222_106942514_106943206_106954912_106955089_106956479_106956535_106956935_106957005_106958335_106958465_106962011_106962111_106976583_106976685_106978079_106978200_106980890_106981020_106981344_106981478_106985095_106985243_106985981_106986201_106993229_106993363_106999676_106999750_106999867
H1_mix_00091937	chrX	-	12113	11	FSM	ENSG00000072315.4	ENST00000262839.3	12143	11	0	30	0	-30	multi-exon	FALSE	canonical	2	3	junction_1	4.05092582010582	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAGTATTTACTTTTT	4425	False	NA	NA	False	AATAAA	-35	NA	112082776	111768040	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_111777003_111778984_111779075_111781164_111781207_111781934_111782139_111834920_111835117_111847113_111847437_111852297_111852438_111853769_111854107_111912290_111912813_111952042_111952442_112081878
H1_mix_00091939	chrX	-	1558	4	FSM	ENSG00000182508.14	ENST00000371968.8	1559	4	0	1	0	-1	multi-exon	FALSE	canonical	0	0	junction_3	0.816496580927726	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATGTTTCTGCTAGATAC	-7	True	NA	NA	False	AATAAA	-25	NA	112679938	112630648	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_112631602_112660626_112660726_112671008_112671405_112679828
H1_mix_00091940	chrX	-	4830	4	ISM	ENSG00000126016.17	ENST00000371962.5	2720	11	39872	-3635	39872	0	3prime_fragment	FALSE	canonical	3	14	junction_1	5.71547606649408	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCGTGTGGAAAATGCTT	NA	False	NA	-1	True	AATAAA	-21	NA	112782664	112774876	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_112778665_112778996_112779681_112780885_112781119_112782539
H1_mix_00091943	chrX	-	346411	2	FSM	ENSG00000241743.4	ENST00000674361.1	347561	2	1	1149	1	-1149	multi-exon	FALSE	canonical	3	20	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGGGAGCTTTTTCCTTC	NA	False	NA	NA	False	NA	NA	NA	113991975	113617448	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_113963600_113991715
H1_mix_00091944	chrX	-	1544	4	Intergenic	novelGene_1708	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_1	9.46337971105226	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATATTAGATCCTTCTAA	NA	False	NA	NA	False	AATAAA	-3	NA	114465853	114434451	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_114435600_114461790_114461851_114462914_114463180_114465782
H1_mix_00091947	chrX	-	2967	2	FSM	ENSG00000224281.5	ENST00000446986.1	1874	2	-1092	-1	-226	1	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTACTATTTTTGCAA	439	False	NA	1	True	AATAAA	-14	NA	119469354	119466032	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_119467751_119468105
H1_mix_00091950	chrX	-	2372	7	FSM	ENSG00000018610.15	ENST00000320339.8	2372	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	24.4040069569642	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGTTAACCTTCTTGTA	16	True	NA	-10	True	ATTAAA	-17	NA	119565373	119538148	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_119539790_119541327_119541421_119542504_119542595_119544352_119544492_119545462_119545505_119560267_119560386_119565124
H1_mix_00091951	chrX	-	2496	11	NNC	ENSG00000125354.24	novel	2609	11	NA	NA	95	30569	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	63.5255066882587	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTACTGTTTGTTTTT	120	False	NA	NA	False	NA	NA	NA	119693275	119585154	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_119585182_119615723_119616743_119629317_119629509_119633359_119633493_119637026_119637196_119640691_119640789_119649936_119650099_119652853_119653041_119663481_119663678_119675553_119675669_119693075
H1_mix_00091952	chrX	-	2151	3	ISM	ENSG00000125354.24	ENST00000343984.5	2693	10	59893	-694	25	0	3prime_fragment	FALSE	canonical	3	23	junction_1	64	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTGTGGTGTTCTTAA	7324	False	NA	-4	True	ATTAAA	-16	NA	119633477	119616944	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_119618787_119629317_119629509_119633359
H1_mix_00091953	chrX	-	1993	1	NIC	ENSG00000125351.13	novel	834	7	NA	NA	4991	3073	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGAATTGAATTTTCTTA	8834	False	NA	11	True	AGTAAA	-32	NA	119832941	119830948	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_119830900_119832900
H1_mix_00091954	chrX	-	1875	1	Genic_Genomic	ENSG00000101882.10	novel	NA	NA	NA	NA	299	5	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTGTATTTTTAATGTA	NA	False	NA	0	True	AATAAA	-21	NA	119922541	119920666	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chrX_-_119920700_119922500
H1_mix_00091955	chrX	-	3349	9	FSM	ENSG00000125355.16	ENST00000371369.9	3350	9	0	1	0	0	multi-exon	FALSE	canonical	1	2	junction_6	2.81735691739616	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCACTTGTGTCAAGGTAG	-1	True	NA	-1	True	AATAAA	-18	NA	120311461	120258650	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_120261029_120268243_120268388_120276884_120277048_120285126_120285216_120287153_120287223_120291250_120291341_120293988_120294052_120304348_120304492_120311251
H1_mix_00091956	chrX	-	1024	3	FSM	ENSG00000158290.19	ENST00000486604.1	1024	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCTGTGTGTAAGAACTA	5	True	NA	NA	False	AATAAA	-15	NA	120575524	120571175	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_120572001_120574550_120574631_120575405
H1_mix_00091958	chrX	-	3818	4	Intergenic	novelGene_1723	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	46	junction_3	22.8958996814325	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGCCTCAGGTATTTTTT	NA	False	NA	0	True	ATTAAA	-21	NA	125394128	125382043	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_125385413_125385814_125385912_125386838_125387024_125393961
H1_mix_00091959	chrX	-	11099	2	Intergenic	novelGene_1725	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	56	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGCCTCAGGTATTTTTT	NA	False	NA	0	True	ATTAAA	-21	NA	125394202	125382043	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_125392902_125393961
H1_mix_00091960	chrX	-	12160	1	Intergenic	novelGene_1727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGCCTCAGGTATTTTTT	NA	False	NA	0	True	ATTAAA	-21	NA	125394203	125382043	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_125382000_125394200
H1_mix_00091961	chrX	-	3713	3	Intergenic	novelGene_1728	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	30	junction_1	1.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGCCTCAGGTATTTTTT	NA	False	NA	0	True	ATTAAA	-21	NA	125394203	125382043	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_125385413_125385809_125385912_125393961
H1_mix_00091962	chrX	-	3711	1	FSM	ENSG00000198354.7	ENST00000360028.4	2791	1	0	-920	0	920	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAATGAAATTACTGGTT	-1	True	NA	NA	False	CATAAA	-21	NA	126166289	126162578	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_126162600_126166300
H1_mix_00091963	chrX	-	3971	25	NIC	ENSG00000102038.16	novel	4099	25	NA	NA	28	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	129.447859247996	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTCCTGTTTTTTTGTG	21	True	NA	NA	False	AATAAA	-23	NA	129523436	129446500	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_129447234_129448301_129448444_129465519_129465733_129465843_129465963_129468772_129468906_129471203_129471327_129480700_129480815_129481074_129481186_129487017_129487138_129488936_129489086_129490059_129490193_129491940_129492094_129493039_129493076_129496749_129496872_129497844_129498072_129499731_129499842_129504733_129504803_129506079_129506212_129507940_129508097_129511803_129511984_129515686_129515788_129515893_129515995_129516330_129516498_129518360_129518448_129523196
H1_mix_00091964	chrX	-	4989	23	NIC	ENSG00000102038.16	novel	3948	24	NA	NA	37	0	intron_retention	FALSE	canonical	3	94	junction_11	119.611017279118	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTATTTCCTGTTTTT	62	False	NA	NA	False	AATAAA	-18	NA	129523427	129446505	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_129448444_129465519_129465733_129465843_129465963_129468772_129468906_129471203_129471327_129480700_129480815_129481074_129481186_129487017_129487138_129488936_129489086_129490059_129490193_129491940_129492094_129496749_129496872_129497844_129498072_129499731_129499842_129504733_129504803_129506079_129506212_129507940_129508097_129511803_129511984_129515686_129515788_129515893_129515995_129516330_129516498_129518360_129518448_129523196
H1_mix_00091966	chrX	-	4363	11	NNC	ENSG00000188706.13	novel	4571	11	NA	NA	13	-55	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	73.6511371263201	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATGAAGGAGCCTTGAAT	-24	True	NA	-17	True	AATAAA	-28	NA	129843873	129803342	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_129806487_129810904_129811002_129811405_129811510_129812717_129812821_129813676_129813726_129814657_129814796_129823678_129823838_129828980_129829142_129841918_129842081_129843258_129843327_129843695
H1_mix_00091967	chrX	-	4145	9	FSM	ENSG00000102034.18	ENST00000335997.11	4145	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	4.21307488658818	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGCATAAAGGTGCTGCA	-15	True	NA	51	True	ATTAAA	-7	NA	130110716	130064873	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_130067526_130069299_130069678_130071039_130071233_130071335_130071420_130072225_130072418_130074048_130074142_130074580_130074753_130081255_130081540_130110619
H1_mix_00091968	chrX	-	2154	16	FSM	ENSG00000156709.15	ENST00000675092.1	2154	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	133.975851887155	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTCTCTTGTCAAGGG	-7	True	NA	NA	False	AATAAA	-22	NA	130165746	130129361	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_130129629_130129969_130130194_130131674_130131800_130133312_130133456_130136044_130136186_130136642_130136732_130137077_130137186_130138592_130138702_130139794_130139872_130140532_130140618_130145478_130145570_130147492_130147624_130147751_130147877_130149468_130149569_130156460_130156604_130165550
H1_mix_00091969	chrX	-	4697	20	NNC	ENSG00000056277.16	novel	4638	19	NA	NA	0	6	at_least_one_novel_splicesite	TRUE	canonical	2	5	junction_5	32.5560245859673	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATAGGAGCATTGCTTT	43	False	NA	39	True	AATAAA	-26	NA	130268883	130202700	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_130204993_130205116_130205154_130205296_130205416_130209652_130209716_130210083_130210153_130215192_130215334_130215790_130216102_130220348_130220481_130226758_130226906_130227681_130227783_130228976_130229135_130230509_130230728_130236213_130236321_130236468_130236640_130239581_130239694_130243562_130243700_130243799_130243866_130246858_130247006_130260418_130260466_130268761
H1_mix_00091970	chrX	-	4349	17	NIC	ENSG00000056277.16	novel	4638	19	NA	NA	0	-25	combination_of_known_splicesites	FALSE	canonical	3	6	junction_7	28.4587832443694	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAACTTCATATAAA	43	False	NA	8	True	AATAAA	-33	NA	130268883	130202731	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_130204993_130205116_130205154_130205296_130205416_130209652_130209716_130215192_130215334_130215790_130216102_130220348_130220481_130228976_130229135_130230509_130230728_130236213_130236321_130236468_130236640_130239581_130239694_130243562_130243700_130243799_130243866_130246858_130247006_130260418_130260466_130268761
H1_mix_00091971	chrX	-	4306	19	NIC	ENSG00000147255.19	novel	4461	20	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	2	5	junction_17	35.4902177445498	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGTGGTCTTCTATTGG	4	True	NA	1	True	AATAAA	-32	NA	131289286	131273502	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_131273932_131274082_131274207_131274598_131274767_131274998_131275287_131275477_131275766_131275960_131276249_131276938_131277227_131277855_131278135_131278460_131278752_131279142_131279176_131279270_131279342_131281217_131281339_131281665_131281945_131282443_131282738_131282979_131283265_131285178_131285467_131285766_131286049_131286604_131286742_131289213
H1_mix_00091973	chrX	-	5506	12	FSM	ENSG00000213468.7	ENST00000649541.1	5506	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	61.0638468197816	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTACTGTTGGTTTTAA	-2	True	NA	NA	False	NA	NA	NA	131830604	131688778	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_131692637_131749305_131749459_131755597_131755747_131756610_131756710_131768548_131768697_131777622_131777745_131783886_131784040_131785156_131785259_131793993_131794116_131794323_131794467_131825221_131825366_131830291
H1_mix_00091974	chrX	-	4760	14	NIC	ENSG00000213468.7	novel	2812	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	12	junction_1	57.9490696608342	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACAGAGTTGGGTTTTT	17	True	NA	-6	True	AATAAA	-13	NA	131830585	131691522	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_131692637_131709497_131709557_131749305_131749459_131755597_131755747_131756610_131756710_131768548_131768697_131777622_131777745_131783886_131784040_131785156_131785259_131793993_131794116_131794296_131796332_131804971_131805038_131825221_131825366_131830291
H1_mix_00091975	chrX	-	2520	10	NNC	ENSG00000213468.7	novel	5506	12	NA	NA	18	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	67.4944899442874	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTACAGAGTTGGGTTT	92	False	NA	-8	True	AATAAA	-11	NA	131830567	131691524	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_131692631_131749305_131749459_131755597_131755747_131756610_131756710_131768548_131768697_131777622_131777745_131783886_131784040_131794296_131794467_131825221_131825366_131830291
H1_mix_00091976	chrX	-	4137	11	NIC	ENSG00000213468.7	novel	2478	13	NA	NA	0	6727	intron_retention	FALSE	canonical	3	12	junction_1	61.6620628912138	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTAGTACTGGTGACATT	-2	True	NA	NA	False	NA	NA	NA	131830604	131742529	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_131743249_131749305_131749459_131755597_131755747_131756610_131756710_131768548_131768697_131783886_131784040_131785156_131785259_131793993_131794116_131794296_131796332_131825221_131825366_131830291
H1_mix_00091980	chrX	-	11259	8	FSM	ENSG00000076770.15	ENST00000394311.6	11263	8	1	3	1	0	multi-exon	FALSE	canonical	1	2	junction_7	4.89897948556636	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAAGTGTTTCAGTCCTT	-1	True	NA	NA	False	AATAAA	-16	NA	132413607	132369319	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_132379678_132382177_132382273_132384662_132384699_132386660_132386812_132390846_132391084_132392142_132392335_132406227_132406393_132413582
H1_mix_00091981	chrX	-	3238	2	ISM	ENSG00000171004.19	ENST00000406696.5	3775	5	288249	-18	89066	5	3prime_fragment	FALSE	canonical	2	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTAATCTCATAATTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	132669266	132626009	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrX_-_132629094_132669112
H1_mix_00091983	chrX	-	519	1	FSM	ENSG00000284499.1	ENST00000384840.3	75	1	-218	-226	-218	226	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACTCTTTTTTTTTTAA	4416	False	NA	NA	False	AATAAA	-22	NA	134169670	134169151	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_134169200_134169700
H1_mix_00091984	chrX	-	1015	2	FSM	ENSG00000223749.11	ENST00000666697.1	991	2	-44	20	-44	-20	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTAAAAAAAAAACTCCTAA	4555	False	NA	NA	False	NA	NA	NA	134545088	134543359	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_134544000_134544713
H1_mix_00091985	chrX	-	4293	1	NIC	ENSG00000156504.17	novel	4246	9	NA	NA	15246	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTGTTTTAAAAGTCTGT	3665	False	NA	-17	True	AATAAA	-25	NA	134773858	134769565	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_134769600_134773900
H1_mix_00091987	chrX	-	3582	10	NIC	ENSG00000156504.17	novel	1059	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	41	junction_9	50.841802573167	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTGTTTTAAAAGTCTGT	43	False	134797249	-17	True	AATAAA	-25	NA	134797232	134769565	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_134772284_134781820_134781918_134785885_134785951_134787471_134787534_134788729_134788832_134789084_134789140_134789222_134789267_134793814_134793894_134796107_134796356_134797120
H1_mix_00091988	chrX	-	817	2	FSM	ENSG00000203950.7	ENST00000520964.1	817	2	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAGAAATGGAGTCTCAAT	-40	True	NA	-76	True	AATAAA	-16	NA	135052196	135050939	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_135051477_135051916
H1_mix_00091989	chrX	-	3647	8	NNC	ENSG00000186376.15	novel	5611	7	NA	NA	633	-2	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_7	9.81252843489966	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTCAGAAATGGCCAATG	660	False	NA	-6	True	AATAAA	-19	NA	135343454	135285793	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_135287847_135291008_135291136_135291471_135291564_135292280_135292474_135293729_135294259_135295767_135296040_135341767_135341955_135343260
H1_mix_00091990	chrX	-	913	1	FSM	ENSG00000225125.2	ENST00000413361.2	655	1	216	-474	216	474	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGATAAAAATTTCTAAAAAA	NA	False	NA	NA	False	AATATA	-24	NA	136807661	136806748	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_136806700_136807700
H1_mix_00091993	chrX	-	808	3	Intergenic	novelGene_1739	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_2	7.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	0	True	AATAAA	-22	NA	138269722	138264393	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_138264704_138267519_138267779_138269483
H1_mix_00091994	chrX	-	2525	2	Intergenic	novelGene_1740	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	0	True	AATAAA	-22	NA	138269734	138264393	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_-_138264704_138267519
H1_mix_00091995	chrX	-	2698	8	NNC	ENSG00000269556.9	novel	2720	7	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	3	53	junction_7	84.7423465932024	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGTGCATGATGTGTATC	6	True	NA	NA	False	AATAAA	-16	NA	149631792	149596556	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_149598256_149599553_149599678_149600302_149600480_149603986_149604071_149608626_149608835_149611286_149611464_149631542_149631736_149631756
H1_mix_00091997	chrX	-	3669	10	FSM	ENSG00000011677.13	ENST00000370314.9	3669	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	21.3807343762822	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTCTGCAGAACTTTCT	-7	True	NA	0	True	ATTAAA	-17	NA	152451315	152166233	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_152168564_152189729_152189942_152197632_152197786_152208000_152208145_152224762_152224846_152255777_152255999_152284667_152284736_152345580_152345703_152364430_152364597_152451145
H1_mix_00091999	chrX	-	1310	11	NNC	ENSG00000213397.12	novel	1306	10	NA	NA	0	17772	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	154.02756246854	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGGACACAGCTAAAAAATC	514	False	NA	NA	False	NA	NA	NA	153470553	153429895	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_153429923_153447667_153447910_153454393_153454509_153455541_153455767_153456264_153456365_153456492_153456652_153457136_153457229_153462609_153462672_153464987_153465056_153469145_153469262_153470449
H1_mix_00092002	chrX	-	1512	11	NIC	ENSG00000067829.20	novel	1712	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	7	junction_9	94.6401606084859	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCGTGGGCCTCCCTCA	11	True	NA	-35	True	AATAAA	-17	NA	153794324	153785765	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_153786273_153786354_153786450_153786800_153786948_153787050_153787154_153787463_153787598_153787822_153787956_153788074_153788136_153789711_153789825_153790194_153790293_153790809_153790852_153794245
H1_mix_00092003	chrX	-	3420	6	FSM	ENSG00000067840.13	ENST00000544474.5	3418	6	0	-2	0	0	multi-exon	FALSE	canonical	1	1	junction_5	12.7436258576592	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGGCCTCCCTGTGTTCA	-6	True	NA	-5	True	AATAAA	-27	NA	153830548	153802165	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_153804901_153805096_153805208_153805504_153805607_153806070_153806134_153806741_153806841_153830238
H1_mix_00092005	chrX	-	3521	15	NNC	ENSG00000184216.14	novel	3581	14	NA	NA	0	34876	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	53.3570950468327	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGGTGTGGTGGCTCAC	1278	False	NA	NA	False	TTTAAA	-29	NA	154019812	153975629	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_153975660_154010506_154011918_154012528_154012679_154013042_154013434_154014041_154014279_154016031_154016098_154016436_154016645_154016948_154017068_154018005_154018121_154018290_154018356_154018598_154018788_154018974_154019079_154019196_154019329_154019430_154019599_154019676
H1_mix_00092011	chrX	-	988	4	NNC	ENSG00000196976.8	novel	967	3	NA	NA	24	70559	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	872.99497262139	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCACTTTGGGAGGCTGAG	15	True	NA	NA	False	NA	NA	NA	154479257	154407215	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrX_-_154407255_154477768_154478059_154478282_154478412_154478727
H1_mix_00092013	chrX	-	1901	10	FSM	ENSG00000071889.17	ENST00000621967.4	1901	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_7	23.6429197503394	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGCCTTCAGATGCTGT	-16	True	NA	-13	True	AATAAA	-18	NA	154516242	154506170	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507862_154508288_154508348_154508473_154508598_154511847_154511872_154512313_154512412_154512822_154512937_154515759
H1_mix_00092014	chrX	-	2216	13	NIC	ENSG00000160211.19	novel	2223	13	NA	NA	2	6	combination_of_known_junctions	FALSE	canonical	3	8	junction_8	19.1586939939954	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCCTTGTCATTTGCTTC	738	False	NA	-1	True	ATTAAA	-20	NA	154546830	154531384	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrX_-_154532091_154532187_154532281_154532385_154532463_154532566_154532803_154532941_154533129_154533575_154533670_154534034_154534161_154534337_154534500_154535167_154535386_154535936_154536046_154536140_154536179_154546035_154546164_154546788
H1_mix_00092019	chrX	-	1771	2	Genic_Genomic	ENSG00000277150.2	novel	1707	1	NA	NA	-35	40189	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGATAACTGTTGTGTGT	1316	False	NA	NA	False	AAAAAG	-2	NA	155458655	155416724	H1_mix_long_short	iso_detect_ref_jhu_pertea	Genic_Genomic_chrX_-_155416757_155456916
H1_mix_00092020	chrX	+	5686	1	Intergenic	novelGene_1635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGTGGTCTCTTCACA	NA	False	NA	19	True	AATAAA	-25	NA	4891613	4897299	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_4891600_4897300
H1_mix_00092021	chrX	+	260	1	Intergenic	novelGene_1645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCCTGAAAAATTGCTTGG	NA	False	NA	NA	False	TATAAA	-19	NA	16045713	16045973	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_16045700_16046000
H1_mix_00092022	chrX	+	319	1	Intergenic	novelGene_1659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTCCCCCAACTCCCTG	NA	False	NA	NA	False	ATTAAA	-32	NA	30617856	30618175	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_30617900_30618200
H1_mix_00092023	chrX	+	3277	1	Intergenic	novelGene_1660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATCCCAGCACTTTGGG	NA	False	NA	NA	False	NA	NA	NA	37090070	37093347	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_37090100_37093300
H1_mix_00092024	chrX	+	1665	1	Intergenic	novelGene_1668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTCTATAAATGTCAACC	2530	False	NA	6	True	AATAAA	-19	NA	54568376	54570041	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_54568400_54570000
H1_mix_00092025	chrX	+	1142	1	Intergenic	novelGene_1671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74226167	74227309	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_74226200_74227300
H1_mix_00092027	chrX	+	308	1	Intergenic	novelGene_1694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTCAAAAACAAAAACAAAAG	NA	False	NA	NA	False	NA	NA	NA	97146007	97146315	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_97146000_97146300
H1_mix_00092030	chrX	+	256	1	Intergenic	novelGene_1713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGTCTTTTATACCTAAA	NA	False	NA	NA	False	NA	NA	NA	115679953	115680209	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrX_+_115680000_115680200
H1_mix_00092032	chrY	+	1189	7	FSM	ENSG00000129824.16	ENST00000250784.13	1189	7	0	0	0	0	multi-exon	FALSE	canonical	3	1391	junction_1	382.874508016516	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTCCCTTTTTCCTTGCT	0	True	NA	NA	False	ATTAAA	-19	NA	2841601	2867268	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_2841628_2842164_2842243_2844076_2844258_2845645_2845744_2854599_2854772_2865087_2865246_2866792
H1_mix_00092033	chrY	+	811	7	FSM	ENSG00000129824.16	ENST00000430575.1	811	7	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	814.872314469506	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGCTGGCCACCAAACAG	47	False	NA	-27	True	NA	NA	NA	2841919	2866862	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_2841974_2842164_2842243_2844076_2844258_2845645_2845744_2854599_2854772_2865087_2865246_2866792
H1_mix_00092034	chrY	+	998	3	FSM	ENSG00000129824.16	ENST00000477725.1	998	3	0	0	0	0	multi-exon	FALSE	canonical	3	2460	junction_2	18.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTTTTCCCCCTTGTG	6466	False	NA	26	True	AATAAA	-22	NA	2854095	2866956	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_2854772_2865087_2865246_2866792
H1_mix_00092036	chrY	+	5608	8	FSM	ENSG00000067646.12	ENST00000383052.5	5113	8	-495	0	-495	0	multi-exon	FALSE	canonical	3	43	junction_3	6.13454587245254	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCAATACTAAGTTAACTC	NA	False	NA	25	True	AATAAA	-41	NA	2934785	2982506	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_2935447_2953908_2953998_2961073_2961647_2975094_2975245_2975510_2975655_2976669_2976823_2977939_2978081_2978809
H1_mix_00092037	chrY	+	5336	8	FSM	ENSG00000067646.12	ENST00000155093.8	5336	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	15.1818903934381	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCAATACTAAGTTAACTC	-20	True	NA	25	True	AATAAA	-41	NA	2935380	2982506	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_2935770_2953908_2953998_2961073_2961647_2975094_2975245_2975510_2975655_2976669_2976823_2977939_2978081_2978809
H1_mix_00092038	chrY	+	5662	2	ISM	ENSG00000099715.14	ENST00000620615.4	329	3	-94	23908	0	-23908	5prime_fragment	FALSE	canonical	3	41	junction_1	0	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATATGATATTAAATAAAAT	0	True	NA	NA	False	NA	NA	NA	5000295	5008039	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrY_+_5000606_5002687
H1_mix_00092039	chrY	+	3323	2	FSM	ENSG00000099715.14	ENST00000215473.7	4595	2	801	471	799	-471	multi-exon	FALSE	canonical	3	16	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGCTAGAAAATATATTGAA	NA	False	NA	NA	False	NA	NA	NA	5056888	5100966	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_5057460_5098214
H1_mix_00092040	chrY	+	1399	4	NNC	ENSG00000092377.15	novel	2312	18	NA	NA	0	-175175	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	17.9691092959247	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGAGTTTGAGACCAGCC	-8	True	NA	NA	False	NA	NA	NA	6910685	6916508	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_+_6910983_6912087_6912173_6914578_6914679_6915591
H1_mix_00092041	chrY	+	1321	7	NNC	ENSG00000092377.15	novel	2312	18	NA	NA	-204	-48103	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_2	15.1299922890485	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTCGTTTCCACCCCACT	616	False	NA	NA	False	AATAAA	-43	NA	6910481	7043580	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_+_6910983_6912087_6912173_6978212_6978244_7021448_7021538_7025034_7025143_7042979_7043126_7043219
H1_mix_00092042	chrY	+	7235	8	FSM	ENSG00000099725.14	ENST00000528056.5	7218	8	-17	0	-17	0	multi-exon	FALSE	canonical	3	19	junction_3	4.74234076362795	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGAGTTTTGTCGCTTCTG	16	False	NA	20	True	AATAAA	-21	NA	7273954	7381548	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_7274479_7303936_7304106_7325905_7326170_7341114_7341235_7356134_7356231_7367355_7367434_7371742_7371890_7375711
H1_mix_00092043	chrY	+	5299	4	FSM	ENSG00000114374.13	ENST00000440408.5	5284	4	-15	0	-15	0	multi-exon	FALSE	canonical	3	200	junction_3	186.269219739124	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAGTGTCTAAAGCAGTG	NA	False	NA	NA	False	AATAAA	-44	NA	12662318	12692233	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_12662707_12664639_12664687_12686512_12686607_12687463
H1_mix_00092044	chrY	+	9826	49	NIC	ENSG00000114374.13	novel	9640	48	NA	NA	1	0	combination_of_known_junctions	TRUE	canonical	3	52	junction_4	83.0233296362467	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTCCTGTGGTGTGTT	NA	False	NA	15	True	AATAAA	-12	NA	12662334	12860839	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrY_+_12662707_12664639_12664687_12686512_12686607_12690325_12690442_12702009_12702056_12709387_12709544_12720588_12720738_12722107_12722188_12725112_12725226_12726574_12726794_12735611_12735728_12735997_12736250_12736410_12736550_12738156_12738310_12739524_12739630_12757191_12757399_12758505_12758643_12760483_12760618_12771067_12771156_12773582_12773926_12775470_12775567_12776648_12776861_12778018_12778260_12778605_12778756_12779525_12779647_12786202_12786334_12786521_12786801_12790406_12790533_12791498_12791625_12793031_12793202_12810178_12810288_12810671_12810819_12811634_12811782_12812829_12813053_12816123_12816345_12818419_12818611_12833687_12833862_12837910_12838053_12839863_12840615_12841009_12841134_12842239_12842466_12843063_12843194_12846332_12846519_12846932_12847154_12847238_12847328_12856339_12856497_12856632_12856846_12857565_12857662_12859278
H1_mix_00092045	chrY	+	9524	48	NNC	ENSG00000114374.13	novel	9640	48	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	110	junction_40	73.3448047874997	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTCCTGTGGTGTGTT	NA	False	NA	15	True	AATAAA	-12	NA	12662334	12860839	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_+_12662707_12664639_12664687_12686512_12686607_12702009_12702056_12709387_12709544_12720588_12720738_12722107_12722188_12725112_12725226_12726574_12726794_12735611_12735728_12735997_12736250_12736410_12736550_12738156_12738310_12739524_12739630_12757191_12757399_12758505_12758643_12760483_12760618_12771067_12771156_12773582_12773926_12775470_12775567_12776648_12776861_12778018_12778260_12778605_12778756_12779525_12779647_12786202_12786334_12786521_12786801_12790406_12790533_12791498_12791625_12793031_12793202_12810178_12810288_12810671_12810819_12811634_12811782_12812829_12813053_12816123_12816345_12818419_12818611_12833687_12833862_12837910_12838053_12839863_12840615_12841009_12841134_12842239_12842280_12843063_12843194_12846332_12846519_12846932_12847154_12847238_12847328_12856339_12856497_12856632_12856846_12857565_12857662_12859278
H1_mix_00092046	chrY	+	2388	4	ISM	ENSG00000114374.13	ENST00000457658.6	2417	9	124718	16636	0	0	internal_fragment	FALSE	canonical	3	78	junction_3	243.765369885789	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAGTGTCTAAAGCAGTG	3	True	NA	NA	False	AATAAA	-44	NA	12662367	12692233	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrY_+_12662707_12664639_12664687_12686512_12686607_12690325
H1_mix_00092047	chrY	+	9640	48	FSM	ENSG00000114374.13	ENST00000651177.1	9640	48	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_3	67.5942009882734	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATTTTGCTGAATTCACA	3	True	NA	-22	True	TTTAAA	-26	NA	12662367	12860802	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_12662707_12664639_12664687_12686512_12686607_12702009_12702056_12709387_12709544_12720588_12720738_12722107_12722188_12725112_12725226_12726574_12726794_12735611_12735728_12735997_12736250_12736410_12736550_12738156_12738310_12739524_12739630_12757191_12757399_12758505_12758643_12760483_12760618_12771067_12771156_12773582_12773926_12775470_12775567_12776648_12776861_12778018_12778260_12778605_12778756_12779525_12779647_12786202_12786334_12786521_12786801_12790406_12790533_12791498_12791625_12793031_12793202_12810178_12810288_12810671_12810819_12811634_12811782_12812829_12813053_12816123_12816345_12818419_12818611_12833687_12833862_12837910_12838053_12839863_12840615_12841009_12841134_12842239_12842466_12843063_12843194_12846332_12846519_12846932_12847154_12847238_12847328_12856339_12856497_12856632_12856846_12857565_12857662_12859278
H1_mix_00092048	chrY	+	12432	49	NNC	ENSG00000114374.13	novel	9640	48	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_4	82.3823629949936	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATTTTGCTGAATTCACA	3	True	NA	-22	True	TTTAAA	-26	NA	12662367	12860802	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_+_12662707_12664639_12664687_12686512_12686607_12687463_12690442_12702009_12702056_12709387_12709544_12720588_12720738_12722107_12722188_12725112_12725226_12726574_12726794_12735611_12735728_12735997_12736250_12736410_12736550_12738156_12738310_12739524_12739630_12757191_12757399_12758505_12758643_12760483_12760618_12771067_12771156_12773582_12773926_12775470_12775567_12776648_12776861_12778018_12778260_12778605_12778756_12779525_12779647_12786202_12786334_12786521_12786801_12790406_12790533_12791498_12791625_12793031_12793202_12810178_12810288_12810671_12810819_12811634_12811782_12812829_12813053_12816123_12816345_12818419_12818611_12833687_12833862_12837910_12838053_12839863_12840615_12841009_12841134_12842239_12842280_12843063_12843194_12846332_12846519_12846932_12847154_12847238_12847328_12856339_12856497_12856632_12856846_12857565_12857662_12859278
H1_mix_00092049	chrY	+	9737	49	NIC	ENSG00000114374.13	novel	9640	48	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	68	junction_4	83.0660714264387	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTCCTGTGGTGTGTT	3	True	NA	15	True	AATAAA	-12	NA	12662367	12860839	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrY_+_12662707_12664639_12664687_12686512_12686607_12702009_12702056_12708633_12708694_12709387_12709544_12720588_12720738_12722107_12722188_12725112_12725226_12726574_12726794_12735611_12735728_12735997_12736250_12736410_12736550_12738156_12738310_12739524_12739630_12757191_12757399_12758505_12758643_12760483_12760618_12771067_12771156_12773582_12773926_12775470_12775567_12776648_12776861_12778018_12778260_12778605_12778756_12779525_12779647_12786202_12786334_12786521_12786801_12790406_12790533_12791498_12791625_12793031_12793202_12810178_12810288_12810671_12810819_12811634_12811782_12812829_12813053_12816123_12816345_12818419_12818611_12833687_12833862_12837910_12838053_12839863_12840615_12841009_12841134_12842239_12842466_12843063_12843194_12846332_12846519_12846932_12847154_12847238_12847328_12856339_12856497_12856632_12856846_12857565_12857662_12859278
H1_mix_00092050	chrY	+	9874	46	FSM	ENSG00000114374.13	ENST00000338981.7	10036	46	162	0	162	0	multi-exon	FALSE	canonical	3	68	junction_1	58.5203309611495	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTCCTGTGGTGTGTT	271	False	NA	15	True	AATAAA	-12	NA	12701392	12860839	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_12702056_12708633_12708694_12709387_12709544_12720588_12720738_12722107_12722188_12725112_12725226_12726574_12726794_12735611_12735728_12735997_12736250_12736410_12736550_12738156_12738310_12739524_12739630_12757191_12757399_12758505_12758643_12760483_12760618_12771067_12771156_12773582_12773926_12775470_12775567_12776648_12776861_12778018_12778260_12778605_12778756_12779525_12779647_12786202_12786334_12786521_12786801_12790406_12790533_12791498_12791625_12793031_12793202_12810178_12810288_12810671_12810819_12811634_12811782_12812829_12813053_12816123_12816345_12818419_12818611_12833687_12833862_12837910_12838053_12839863_12840615_12841009_12841134_12842239_12842466_12843063_12843194_12846332_12846519_12846932_12847154_12847238_12847328_12856339_12856497_12856632_12856846_12857565_12857662_12859278
H1_mix_00092052	chrY	+	2410	2	FSM	ENSG00000114374.13	ENST00000471409.1	2410	2	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTCCTGTGGTGTGTT	NA	False	NA	15	True	AATAAA	-12	NA	12856812	12860839	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_12857662_12859278
H1_mix_00092053	chrY	+	4427	17	FSM	ENSG00000067048.17	ENST00000336079.8	4408	17	-19	0	0	0	multi-exon	FALSE	canonical	3	346	junction_9	39.1937794012009	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTGTCACTTGTAGC	12	True	NA	18	True	AATAAA	-14	NA	12904848	12920478	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_12904982_12907536_12907595_12909359_12909408_12911838_12911969_12912726_12912883_12912962_12913063_12913717_12913854_12914563_12914650_12914883_12914983_12915066_12915228_12915629_12915775_12915882_12916028_12916260_12916443_12916516_12916635_12916906_12917061_12917402_12917543_12918042
H1_mix_00092054	chrY	+	815	8	FSM	ENSG00000067048.17	ENST00000440554.1	792	8	-23	0	-23	0	multi-exon	FALSE	canonical	3	116	junction_1	108.120114611822	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAGGTTTTGTTATAAAA	-20	True	NA	NA	False	NA	NA	NA	12905714	12914649	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_12905816_12907536_12907595_12909359_12909408_12911838_12911969_12912726_12912883_12912962_12913063_12913717_12913854_12914563
H1_mix_00092055	chrY	+	4382	17	NIC	ENSG00000067048.17	novel	792	8	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	116	junction_1	83.222194117615	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTGTCACTTGTAGC	-7	True	NA	18	True	AATAAA	-14	NA	12905727	12920478	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrY_+_12905816_12907536_12907595_12909359_12909408_12911838_12911969_12912726_12912883_12912962_12913063_12913717_12913854_12914563_12914650_12914883_12914983_12915066_12915228_12915629_12915775_12915882_12916028_12916260_12916443_12916516_12916635_12916906_12917061_12917402_12917543_12918042
H1_mix_00092059	chrY	+	760	1	FSM	ENSG00000215414.4	ENST00000400275.2	741	1	-19	0	-19	0	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGTTGTTAGTTTACCA	NA	False	NA	NA	False	NA	NA	NA	13286618	13287378	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_13286600_13287400
H1_mix_00092060	chrY	+	962	3	NNC	ENSG00000154620.6	novel	1337	2	NA	NA	-1005	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	6	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTTCTAAGACCTGTAT	-1	True	NA	5	True	AATAAA	-18	NA	13702893	13706024	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_+_13702954_13704333_13704436_13705224
H1_mix_00092061	chrY	+	1630	2	FSM	ENSG00000154620.6	ENST00000284856.4	1337	2	-249	-44	-249	44	multi-exon	FALSE	canonical	3	30	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTATGTAACGTTTTAT	159	False	NA	49	True	NA	NA	NA	13703649	13706068	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_13704436_13705224
H1_mix_00092062	chrY	+	6022	10	NNC	ENSG00000241859.7	novel	680	7	NA	NA	-26	10493	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_9	36.3898642787002	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTTGTTCACTTATTTA	NA	False	NA	3	True	AATAAA	-19	NA	13751629	13899473	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_+_13752006_13753093_13753160_13754639_13754790_13790918_13790967_13858516_13858647_13859667_13859822_13869066_13869129_13871632_13871799_13887257_13889469_13896814
H1_mix_00092063	chrY	+	816	4	NNC	ENSG00000241859.7	novel	689	6	NA	NA	-8	-66879	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_3	58.0344725141876	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCCATTTTTGAGTATT	NA	False	NA	11	True	AATAAA	-8	NA	13751647	13791715	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_+_13752006_13753093_13753160_13790918_13790967_13791371
H1_mix_00092064	chrY	+	967	5	NNC	ENSG00000241859.7	novel	689	6	NA	NA	-8	-66873	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_3	62.6912075174821	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTGAGTATTCTTTTC	NA	False	NA	17	True	AATAAA	-14	NA	13751647	13791721	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_+_13752006_13753093_13753160_13754639_13754790_13790923_13790967_13791371
H1_mix_00092066	chrY	+	5850	10	NNC	ENSG00000241859.7	novel	680	7	NA	NA	0	10493	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_9	31.005774054059	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTTGTTCACTTATTTA	112	False	NA	3	True	AATAAA	-19	NA	13751792	13899473	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_+_13752006_13753093_13753160_13754639_13754790_13790918_13790967_13858516_13858647_13859667_13859822_13869066_13869129_13871632_13871799_13887257_13889460_13896814
H1_mix_00092067	chrY	+	680	7	FSM	ENSG00000241859.7	ENST00000460561.1	680	7	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_3	19.4736288919714	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTGACGGTACCAGTTTC	1417	False	NA	NA	False	NA	NA	NA	13753097	13871706	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_13753160_13754639_13754790_13790918_13790967_13858516_13858647_13859667_13859822_13869066_13869129_13871632
H1_mix_00092068	chrY	+	5589	10	NNC	ENSG00000241859.7	novel	2919	7	NA	NA	972	10473	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	45.4673943680225	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGAATTTGAACTGGTA	376	False	NA	-17	True	NA	NA	NA	13754069	13899453	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_+_13755720_13790918_13790967_13854443_13854578_13858516_13858647_13859667_13859822_13869066_13869129_13871632_13871799_13887257_13887464_13889059_13889460_13896814
H1_mix_00092069	chrY	+	4562	4	NNC	ENSG00000241859.7	novel	1816	11	NA	NA	149823	4200	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	8.9938250421547	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGGAGTCGACTCATTTA	NA	False	NA	4	True	AATAAA	-17	NA	13902920	13920024	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_+_13902969_13908171_13908314_13909247_13909361_13915765
H1_mix_00092070	chrY	+	7389	7	FSM	ENSG00000165246.15	ENST00000643089.1	7368	7	-21	0	-21	0	multi-exon	FALSE	canonical	3	65	junction_2	8.56348838577675	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATAGTATATAAAGGGTT	NA	False	NA	NA	False	AATAAA	-2	NA	14522551	14845639	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_14522942_14622008_14622592_14719458_14719519_14723116_14723270_14824187_14824374_14829729_14830520_14840412
H1_mix_00092071	chrY	+	7459	8	NNC	ENSG00000165246.15	novel	7368	7	NA	NA	-20	3	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	30.6753906549979	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTACTATCTGTGGTTT	-7	True	NA	NA	False	AATAAA	-20	NA	14522617	14845657	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_+_14522942_14584172_14584291_14622008_14622592_14719458_14719519_14723116_14723270_14824187_14824374_14829729_14830520_14840412
H1_mix_00092072	chrY	+	987	2	FSM	ENSG00000165246.15	ENST00000481089.1	540	2	-173	-274	-173	145	multi-exon	FALSE	canonical	3	28	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTACCAGGAGGGTTTT	816	False	NA	NA	False	AAAACA	-25	NA	14524355	14622642	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_14524709_14622008
H1_mix_00092073	chrY	+	5310	6	FSM	ENSG00000165246.15	ENST00000339174.9	5310	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	27.1116211245289	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATATCTCATTTCTACG	61	False	NA	NA	False	ATTAAA	-20	NA	14524573	14843647	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_14524937_14622008_14622592_14723116_14723270_14824187_14824374_14829729_14830520_14840412
H1_mix_00092075	chrY	+	3040	2	Intergenic	novelGene_1747	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	64	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAATGTTGGTGTGTGTGA	NA	False	NA	NA	False	NA	NA	NA	16197813	16204676	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrY_+_16198202_16202024
H1_mix_00092076	chrY	+	2104	4	FSM	ENSG00000131002.13	ENST00000459719.6	2098	4	-6	0	-6	0	multi-exon	FALSE	canonical	3	66	junction_1	15.8394724940223	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTACTATTCTCTCATGTG	-14	True	NA	NA	False	AATAAA	-15	NA	19567343	19590418	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_19567571_19587209_19587508_19588369_19589613_19590082
H1_mix_00092077	chrY	+	2325	3	FSM	ENSG00000131002.13	ENST00000686905.1	1911	3	11	-425	9	27	multi-exon	FALSE	canonical	3	69	junction_2	15.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTGTGAAACATTTATG	3	True	NA	8	True	AATAAA	-12	NA	19567360	19590274	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_19567483_19587209_19587508_19588369
H1_mix_00092078	chrY	+	832	4	FSM	ENSG00000131002.13	ENST00000447520.5	832	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	17.6823829464998	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTCTCTCATGTGGTCCA	24	True	NA	NA	False	AATAAA	-20	NA	19567381	19590423	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_19567483_19587209_19587508_19589520_19589613_19590082
H1_mix_00092079	chrY	+	14113	8	NIC	ENSG00000131002.13	novel	1574	10	NA	NA	0	3572	intron_retention	FALSE	canonical	3	49	junction_4	17.3358187647685	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATAGTAGCATAATTTAT	24	True	NA	16	True	AATAAA	-19	NA	19567381	19609846	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrY_+_19567571_19587209_19587508_19588369_19589613_19590082_19591960_19593398_19597666_19599738_19599832_19602215_19602312_19603796
H1_mix_00092080	chrY	+	1954	3	FSM	ENSG00000131002.13	ENST00000693214.1	2569	3	40	575	8	-3	multi-exon	FALSE	canonical	3	66	junction_1	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAATATGCTAGATCAGCA	32	True	NA	6	True	AATAAA	-11	NA	19567389	19589844	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_19567571_19587209_19587508_19588369
H1_mix_00092081	chrY	+	2761	2	FSM	ENSG00000131002.13	ENST00000447202.2	2761	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGCTAGATCAGCAGTT	-19	True	NA	9	True	AATAAA	-14	NA	19567828	19589847	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_19567952_19587209
H1_mix_00092083	chrY	+	1384	6	FSM	ENSG00000198692.10	ENST00000382772.3	746	6	-114	-524	-96	0	multi-exon	FALSE	canonical	2	21	junction_3	233.069603337715	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTCTCAGACTGTCTCT	NA	False	NA	4	True	AATAAA	-14	NA	20575679	20593154	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_20575888_20579607_20579692_20582589_20582694_20588023_20588106_20589483_20589576_20592340
H1_mix_00092084	chrY	+	1339	7	FSM	ENSG00000198692.10	ENST00000361365.7	1339	7	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_5	51.3530806173192	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTCTCAGACTGTCTCT	17	True	NA	4	True	AATAAA	-14	NA	20575775	20593154	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_20575888_20579607_20579692_20582589_20582694_20584473_20584525_20588023_20588106_20589483_20589576_20592340
H1_mix_00092085	chrY	-	829	1	FSM	ENSG00000184895.8	ENST00000383070.2	828	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACTGGTATTTCATTTT	-1	True	NA	-10	True	AATAAA	-18	NA	2787682	2786853	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_2786900_2787700
H1_mix_00092086	chrY	-	838	1	FSM	ENSG00000278847.1	ENST00000611750.1	366	1	-482	10	-482	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	183	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCCAAAAACGTGTATTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	2935253	2934415	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_2934400_2935300
H1_mix_00092087	chrY	-	258	1	FSM	ENSG00000231341.1	ENST00000430062.1	855	1	689	-92	689	92	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGTATTGCTAAATATGT	NA	False	NA	NA	False	NA	NA	NA	5207380	5207122	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_5207100_5207400
H1_mix_00092088	chrY	-	2995	2	Antisense	novelGene_ENSG00000099715.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTAAATTTTTGTGTTT	NA	False	NA	NA	False	AATATA	-8	NA	5330082	5324279	H1_mix_long_short	iso_detect_ref_jhu_pertea	Antisense_chrY_-_5325185_5327992
H1_mix_00092089	chrY	-	1224	1	FSM	ENSG00000235001.3	ENST00000422633.1	1220	1	-4	0	-4	0	mono-exon	FALSE	NA	NA	NA	NA	NA	654	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCTGTCCTGCCGCCCAG	NA	False	NA	NA	False	NA	NA	NA	5338968	5337744	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_5337700_5339000
H1_mix_00092090	chrY	-	438	1	FSM	ENSG00000235175.1	ENST00000411983.1	438	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAATCTTATATACAAGCT	NA	False	NA	NA	False	AATACA	-33	NA	5793737	5793299	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_5793300_5793700
H1_mix_00092091	chrY	-	832	4	NIC	ENSG00000206159.12	novel	639	3	NA	NA	-113	44	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	47.4856703531591	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTAACTAACCCCCTTGT	NA	False	NA	34	True	AAAACA	-39	NA	12421700	12354371	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrY_-_12354772_12406795_12406938_12420315_12420455_12421549
H1_mix_00092092	chrY	-	647	3	FSM	ENSG00000206159.12	ENST00000382966.5	639	3	0	-8	0	8	multi-exon	FALSE	canonical	3	31	junction_1	57	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATAGCTTCTGTCAAACTT	1129	False	NA	-2	True	ATTAAA	-28	NA	12420456	12354407	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_12354772_12406795_12406938_12420315
H1_mix_00092094	chrY	-	798	5	NIC	ENSG00000206159.12	novel	534	4	NA	NA	-113	10	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	55.8407333404568	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTTGTACTATTATATT	NA	False	NA	-1	True	AATAAA	-28	NA	12421700	12378521	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrY_-_12378750_12398679_12398818_12406795_12406938_12420315_12420455_12421549
H1_mix_00092095	chrY	-	620	4	FSM	ENSG00000206159.12	ENST00000689264.1	617	4	-2	-1	-2	-1	multi-exon	FALSE	canonical	3	55	junction_1	41.0852771683483	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGCCCCCATTCTTTGT	24	False	NA	-12	True	AATAAA	-17	NA	12421561	12378532	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_12378750_12406795_12406938_12420315_12420455_12421439
H1_mix_00092097	chrY	-	4571	28	FSM	ENSG00000183878.16	ENST00000682216.1	4571	28	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_16	17.6341419684362	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTCCACGTTCCTCATT	19	True	NA	0	True	AATAAA	-27	NA	13479969	13234576	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_13234827_13251016_13251188_13260277_13260405_13297706_13297849_13298956_13299145_13302876_13302992_13305398_13305548_13306037_13306113_13306185_13306251_13323554_13323761_13324600_13324707_13326220_13326351_13335562_13336336_13355002_13355399_13355922_13356019_13357876_13357970_13359766_13359987_13360429_13360529_13366266_13366394_13369255_13369350_13393858_13393894_13396917_13396973_13410992_13411114_13414734_13414794_13449016_13449067_13470120_13470230_13479253_13479318_13479513
H1_mix_00092098	chrY	-	5228	22	NNC	ENSG00000183878.16	novel	4179	29	NA	NA	-11357	3	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_21	24.5756733136828	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTTCTGAAGCATTTTT	NA	False	NA	35	True	NA	NA	NA	13371144	13248381	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_-_13249883_13251016_13251188_13260277_13260405_13297706_13297849_13298956_13299145_13302876_13302992_13305398_13305548_13306037_13306113_13306185_13306251_13323554_13323761_13324600_13324707_13326220_13326351_13335562_13336336_13355002_13355399_13355922_13356019_13357876_13357970_13359087_13359223_13359766_13359987_13360429_13360529_13366266_13366394_13369255_13369350_13370924
H1_mix_00092099	chrY	-	6126	28	FSM	ENSG00000183878.16	ENST00000331397.8	6529	28	400	3	-240	3	multi-exon	FALSE	canonical	3	21	junction_1	18.4915358978865	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTTCTGAAGCATTTTT	488	False	NA	35	True	NA	NA	NA	13480273	13248381	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_13249883_13251016_13251188_13260277_13260405_13297706_13297849_13298956_13299145_13302876_13302992_13305398_13305548_13306037_13306113_13306185_13306251_13323554_13323761_13324600_13324707_13326220_13326351_13335562_13336336_13355002_13355399_13355922_13356019_13357876_13357970_13359766_13359987_13360429_13360529_13366266_13366394_13369255_13369350_13393858_13393894_13396917_13396973_13410992_13411114_13414734_13414794_13449016_13449067_13470120_13470230_13479253_13479318_13479513
H1_mix_00092100	chrY	-	3928	20	FSM	ENSG00000183878.16	ENST00000329134.9	4325	20	397	0	-240	0	multi-exon	FALSE	canonical	2	2	junction_1	20.1552148830175	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTATTTTTGGAATTTTTT	488	False	NA	-4	True	AATAAA	-19	NA	13480273	13323033	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_13323369_13323554_13323761_13324600_13324707_13326220_13326351_13335562_13336336_13355002_13355399_13355922_13356019_13357876_13357970_13359766_13359987_13360429_13360529_13366266_13366394_13369255_13369350_13393858_13393894_13396917_13396973_13410992_13411114_13414734_13414794_13449016_13449067_13470120_13470230_13479253_13479318_13479513
H1_mix_00092101	chrY	-	1539	7	FSM	ENSG00000183878.16	ENST00000382893.2	1539	7	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_4	5.87839736284947	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGAGTCTATAATTGAAT	10	True	NA	NA	False	ATTAAA	-26	NA	13479978	13396301	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_13396973_13410992_13411114_13414734_13414794_13449016_13449067_13470120_13470230_13479253_13479318_13479513
H1_mix_00092103	chrY	-	602	2	Intergenic	novelGene_1749	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCTGTCCATATGTTTCT	NA	False	NA	NA	False	AATATA	-18	NA	16387342	16367759	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrY_-_16368161_16387141
H1_mix_00092104	chrY	-	2685	2	Intergenic	novelGene_1750	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	65	junction_1	0	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGCCCTTGTTCTCCTTA	NA	False	NA	NA	False	AATAAA	-13	NA	16387523	16381015	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrY_-_16383319_16387141
H1_mix_00092105	chrY	-	1495	2	FSM	ENSG00000176728.10	ENST00000324446.3	1495	2	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGTATCAGGTGACTG	NA	False	NA	1	True	AATAAA	-17	NA	18878228	18872500	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_18872835_18877067
H1_mix_00092106	chrY	-	1186	7	FSM	ENSG00000176728.10	ENST00000657901.1	1186	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	17.5973482850873	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGTATCAGGTGACTG	1467	False	NA	1	True	AATAAA	-17	NA	19076024	18872500	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_18872835_18877067_18877206_19041369_19041587_19043162_19043347_19044541_19044696_19068723_19068799_19075940
H1_mix_00092108	chrY	-	243	1	FSM	ENSG00000185275.6	ENST00000382840.3	243	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACTCAGGCCAAGAAACG	109	False	NA	NA	False	NA	NA	NA	18992709	18992466	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_18992500_18992700
H1_mix_00092109	chrY	-	3155	2	FSM	ENSG00000176728.10	ENST00000667450.1	3232	2	0	77	0	-77	multi-exon	FALSE	canonical	3	6	junction_1	0	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATGCTTTGCTAATGGAA	NA	False	NA	NA	False	NA	NA	NA	19044666	19040316	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_19043347_19044541
H1_mix_00092110	chrY	-	6825	27	FSM	ENSG00000012817.16	ENST00000317961.9	6825	27	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_24	17.0948017982283	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGCTGTCTTGGTCTCTT	-4	True	NA	-3	True	AATAAA	-17	NA	19744726	19703864	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_19706346_19706440_19706641_19706793_19706864_19707146_19707747_19707933_19708072_19708243_19708424_19708874_19709014_19709450_19709810_19710375_19710473_19715351_19715500_19715614_19715740_19715822_19716005_19716278_19716474_19716595_19716716_19720871_19721035_19721129_19721312_19731771_19731931_19732045_19732166_19732583_19732743_19735351_19735498_19735620_19735751_19739527_19739663_19741317_19741489_19741734_19741858_19743161_19743240_19744384_19744554_19744670
H1_mix_00092111	chrY	-	5304	27	NNC	ENSG00000012817.16	novel	6825	27	NA	NA	5	282	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_8	22.5783645195727	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTTGTTGCATTGCATC	193	False	NA	NA	False	NA	NA	NA	19744706	19705134	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_-_19706346_19706440_19706641_19706793_19706864_19707146_19707747_19707933_19708072_19708243_19708424_19708874_19709014_19709450_19709579_19710375_19710473_19715351_19715500_19715614_19715740_19715822_19716005_19716278_19716474_19716595_19716716_19720871_19721035_19721129_19721312_19731771_19731931_19732045_19732166_19732583_19732743_19735351_19735498_19735620_19735751_19739527_19739663_19741317_19741489_19741734_19741858_19743161_19743240_19744384_19744554_19744670
H1_mix_00092114	chrY	-	1336	11	FSM	ENSG00000012817.16	ENST00000447300.1	1336	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	29.1288516766453	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAGATCAGTCTGTTCTC	11	True	NA	NA	False	NA	NA	NA	19744711	19721271	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_19721312_19731771_19731931_19732045_19732166_19732583_19732743_19735351_19735498_19735620_19735751_19741317_19741489_19741734_19741858_19743161_19743240_19744384_19744554_19744670
H1_mix_00092115	chrY	+	4535	1	Intergenic	novelGene_1746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	221	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGGTGGTCTCTTCAC	NA	False	NA	27	True	AATAAA	-24	NA	5941467	5946002	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrY_+_5941500_5946000
H1_mix_00092116	chrY	+	5428	7	NIC	ENSG00000067646.12	novel	5113	8	NA	NA	-404	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	14.8436293854749	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCAATACTAAGTTAACTC	NA	False	NA	25	True	AATAAA	-41	NA	2934876	2982506	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrY_+_2935447_2961073_2961647_2975094_2975245_2975510_2975655_2976669_2976823_2977939_2978081_2978809
H1_mix_00092117	chrY	+	5898	6	FSM	ENSG00000067646.12	ENST00000449237.4	3464	6	-774	-1660	-404	300	multi-exon	FALSE	canonical	1	1	junction_1	25.3897617160934	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTTTTTCTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	2934876	2982806	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_2935770_2961073_2961647_2975094_2975245_2975510_2975655_2977939_2978081_2978809
H1_mix_00092118	chrY	+	1274	1	FSM	ENSG00000214207.2	ENST00000388836.3	1287	1	52	-39	52	39	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAAGTACAGAGTTAA	NA	False	NA	NA	False	NA	NA	NA	5573196	5574470	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_5573200_5574500
H1_mix_00092119	chrY	+	2396	19	FSM	ENSG00000092377.15	ENST00000383032.6	2396	19	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	9.01849950564579	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGTTGTTTTTTTTTGA	3	True	NA	NA	False	NA	NA	NA	6910696	7091683	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_6910983_6912087_6912173_6978212_6978244_6995803_6995899_7021448_7021538_7025034_7025143_7042979_7043126_7063896_7064150_7070195_7070329_7070719_7070862_7071559_7071624_7071732_7071831_7074559_7074621_7080731_7080854_7085897_7085973_7086289_7086418_7087266_7087433_7090088_7090191_7091471
H1_mix_00092120	chrY	+	5244	3	NNC	ENSG00000092377.15	novel	2312	18	NA	NA	15	-171204	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	16	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGAAGCTGTTAACCTGT	18	False	NA	22	True	AATAAA	-23	NA	6910711	6920479	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_+_6910983_6912087_6912173_6915591
H1_mix_00092122	chrY	+	9607	49	NNC	ENSG00000114374.13	novel	9640	48	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_4	87.3756234082036	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTCCTGTGGTGTGTT	3	True	NA	15	True	AATAAA	-12	NA	12662367	12860839	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_+_12662707_12664639_12664687_12686512_12686607_12690325_12690442_12702009_12702056_12709387_12709544_12720588_12720738_12722107_12722188_12725112_12725226_12726574_12726794_12735611_12735728_12735997_12736250_12736410_12736550_12738156_12738310_12739524_12739630_12757191_12757399_12758505_12758643_12760483_12760618_12771067_12771156_12773582_12773926_12775470_12775567_12776648_12776861_12778018_12778260_12778605_12778756_12779525_12779647_12786202_12786334_12786521_12786801_12790406_12790533_12791498_12791625_12793031_12793202_12810178_12810288_12810671_12810819_12811634_12811782_12812829_12813053_12816123_12816345_12818419_12818611_12833687_12833862_12837910_12838053_12839863_12840615_12841009_12841134_12842239_12842280_12843063_12843194_12846332_12846519_12846932_12847154_12847238_12847328_12856339_12856497_12856632_12856846_12857565_12857662_12859278
H1_mix_00092124	chrY	+	9118	44	FSM	ENSG00000114374.13	ENST00000426564.6	9118	44	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_35	56.1090647739802	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTCCTGTGGTGTGTT	109	False	NA	15	True	AATAAA	-12	NA	12709435	12860839	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_12709544_12720588_12720738_12722107_12722188_12725112_12725226_12726574_12726794_12735611_12735728_12735997_12736250_12736410_12736550_12738156_12738310_12739524_12739630_12757191_12757399_12758505_12758643_12760483_12760618_12771067_12771156_12773582_12773926_12775470_12775567_12776648_12776861_12778018_12778260_12778605_12778756_12779525_12779647_12786202_12786334_12786521_12786801_12790406_12790533_12791498_12791625_12793031_12793202_12810178_12810288_12810671_12810819_12811634_12811782_12812829_12813053_12816123_12816345_12818419_12818611_12833687_12833862_12837910_12838053_12839863_12840615_12841009_12841134_12842224_12842466_12843063_12843194_12846332_12846519_12846932_12847154_12847238_12847328_12856339_12856497_12856632_12856846_12857565_12857662_12859278
H1_mix_00092126	chrY	+	6141	12	NNC	ENSG00000241859.7	novel	680	7	NA	NA	-45	10493	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	49.1740037482011	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTTGTTCACTTATTTA	NA	False	NA	3	True	AATAAA	-19	NA	13751610	13899473	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_+_13752006_13753093_13753160_13790918_13790967_13841756_13841788_13842043_13842129_13854443_13854578_13858516_13858647_13859667_13859822_13869066_13869129_13871632_13871799_13887257_13889469_13896814
H1_mix_00092127	chrY	+	5831	9	NNC	ENSG00000241859.7	novel	680	7	NA	NA	3	10493	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	47.3918175954457	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTTGTTCACTTATTTA	NA	False	NA	3	True	AATAAA	-19	NA	13751658	13899473	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_+_13752006_13753093_13753160_13790918_13790967_13858519_13858647_13859667_13859822_13869066_13869129_13871632_13871799_13887257_13889460_13896814
H1_mix_00092129	chrY	+	1266	5	NIC	ENSG00000165246.15	novel	7368	7	NA	NA	0	68	combination_of_known_junctions	FALSE	canonical	3	25	junction_4	24.5051015096857	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTTCTTTACAAGTTTCT	13	True	NA	NA	False	AATAAA	-13	NA	14522637	14733617	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrY_+_14522942_14622008_14622592_14719458_14719519_14723116_14723270_14733451
H1_mix_00092130	chrY	+	12765	5	NIC	ENSG00000131002.13	novel	1574	10	NA	NA	2	-457	intron_retention	FALSE	canonical	3	87	junction_4	5.24404424085076	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAGTTGTAATATGTATA	26	True	NA	22	True	ATTAAA	-19	NA	19567383	19605817	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrY_+_19567483_19587209_19597666_19599738_19599832_19602215_19602312_19603796
H1_mix_00092131	chrY	+	740	3	NIC	ENSG00000131002.13	novel	2018	4	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTATTCTCTCATGTGG	-1	True	NA	NA	False	AATAAA	-16	NA	19567846	19590419	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrY_+_19567952_19587209_19587508_19590082
H1_mix_00092135	chrY	+	641	3	FSM	ENSG00000198692.10	ENST00000485584.1	641	3	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_1	4.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACGTCAAGTAATTGGATA	NA	False	NA	14	True	AATAAA	-26	NA	20587846	20592630	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_20588106_20589483_20589576_20592340
H1_mix_00092136	chrY	-	623	2	ISM	ENSG00000227289.2	ENST00000652562.1	647	4	3237	-153	3237	153	3prime_fragment	FALSE	canonical	3	7	junction_1	0	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGCCAACAACTTTGAAT	NA	False	NA	NA	False	ATTAAA	-20	NA	2887314	2882956	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrY_-_2883408_2887142
H1_mix_00092137	chrY	-	220	1	FSM	ENSG00000278847.1	ENST00000611750.1	366	1	29	117	29	-117	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTTTGGGATTGTCTTC	330	False	NA	-6	True	AATAAA	-14	NA	2934742	2934522	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_2934500_2934700
H1_mix_00092138	chrY	-	832	1	FSM	ENSG00000231341.1	ENST00000430062.1	855	1	114	-91	114	91	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCAAGTATTGCTAAATATG	NA	False	NA	NA	False	NA	NA	NA	5207955	5207123	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_5207100_5208000
H1_mix_00092139	chrY	-	392	1	FSM	ENSG00000235001.3	ENST00000422633.1	1220	1	806	22	806	-22	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGTTGCTGACCTCATCT	NA	False	NA	NA	False	NA	NA	NA	5338158	5337766	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_5337800_5338200
H1_mix_00092140	chrY	-	598	4	NNC	ENSG00000206159.12	novel	2203	10	NA	NA	0	28031	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	52.9926619658064	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGGTGTCTTATATTCC	1	True	NA	0	True	AATAAA	-17	NA	12421584	12326384	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_-_12326667_12406795_12406938_12420315_12420455_12421549
H1_mix_00092141	chrY	-	645	4	NNC	ENSG00000206159.12	novel	639	3	NA	NA	149	-11	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	59.606114526019	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTAAATTTGTAAAACAACG	356	False	NA	-21	True	ATTAAA	-9	NA	12421229	12354426	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_-_12354772_12406795_12406938_12420315_12420455_12421210
H1_mix_00092143	chrY	-	739	4	NIC	ENSG00000206159.12	novel	2203	10	NA	NA	18	-22	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	52.7404546392573	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATAAATGCATCTAATG	44	False	NA	NA	False	AATAAA	-9	NA	12421541	12406144	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrY_-_12406501_12406795_12406938_12420315_12420455_12421439
H1_mix_00092144	chrY	-	3394	19	FSM	ENSG00000183878.16	ENST00000684226.1	3391	19	0	-3	0	0	multi-exon	FALSE	canonical	2	9	junction_17	24.3359333973651	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTCCACGTTCCTCATT	6747	False	NA	0	True	AATAAA	-27	NA	13359787	13234576	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_13234827_13251016_13251188_13260277_13260405_13297706_13297849_13298956_13299145_13302876_13302992_13305398_13305548_13306037_13306113_13306185_13306251_13323554_13323761_13324600_13324707_13326220_13326351_13335562_13336336_13355002_13355399_13355922_13356019_13357876_13357970_13358463_13358620_13359087_13359223_13359766
H1_mix_00092146	chrY	-	4183	29	NIC	ENSG00000183878.16	novel	4705	29	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	1	junction_13	24.2584668576914	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCCATTTGTCCACGTT	1221	False	NA	-7	True	AATAAA	-20	NA	13479540	13234583	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrY_-_13234827_13251016_13251188_13260277_13260405_13297706_13297849_13298956_13299145_13302876_13302992_13305398_13305548_13306037_13306113_13306185_13306251_13323554_13323761_13324600_13324707_13326220_13326351_13335562_13336336_13354785_13354834_13355002_13355399_13355922_13356019_13357876_13357970_13359766_13359987_13360429_13360529_13366266_13366394_13369255_13369350_13393858_13393894_13396917_13396973_13410992_13411114_13414734_13414794_13449016_13449067_13470120_13470230_13479253_13479318_13479513
H1_mix_00092147	chrY	-	6175	30	FSM	ENSG00000183878.16	ENST00000545955.6	6174	30	0	-1	0	1	multi-exon	FALSE	canonical	2	9	junction_17	21.1498813044291	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCCTTTCTGAAGCATTT	-45	True	NA	33	True	NA	NA	NA	13480033	13248383	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_13249883_13251016_13251188_13260277_13260405_13297706_13297849_13298956_13299145_13302876_13302992_13305398_13305548_13306037_13306113_13306185_13306251_13323554_13323761_13324600_13324707_13326220_13326351_13335562_13336336_13355002_13355399_13355922_13356019_13357876_13357970_13358463_13358620_13359087_13359223_13359766_13359987_13360429_13360529_13366266_13366394_13369255_13369350_13393858_13393894_13396917_13396973_13410992_13411114_13414734_13414794_13449016_13449067_13470120_13470230_13479253_13479318_13479513
H1_mix_00092148	chrY	-	5239	30	FSM	ENSG00000183878.16	ENST00000382896.9	5239	30	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	22.0205287422439	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTAGTTTTAAACACTAC	-3	True	NA	NA	False	ATTAAA	-12	NA	13479991	13249141	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_13249813_13251016_13251188_13260277_13260405_13297706_13297849_13298956_13299145_13302876_13302992_13305398_13305548_13306037_13306113_13306185_13306251_13323554_13323761_13324600_13324707_13326220_13326351_13335562_13336336_13355002_13355399_13355922_13356019_13357876_13357970_13358463_13358554_13359087_13359223_13359766_13359987_13360429_13360529_13366266_13366394_13369255_13369350_13393858_13393894_13396917_13396973_13410992_13411114_13414734_13414794_13449016_13449067_13470120_13470230_13479253_13479318_13479513
H1_mix_00092151	chrY	-	615	4	FSM	ENSG00000176728.10	ENST00000670354.1	615	4	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	15.4560308258262	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGTATCAGGTGACTG	-7	True	NA	1	True	AATAAA	-17	NA	19076008	18872500	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_18872835_18877067_18877206_19068723_19068799_19075940
H1_mix_00092153	chrY	-	3575	1	FSM	ENSG00000260197.1	ENST00000566193.1	2666	1	-925	16	-925	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGTAAATATTTAAAATTAT	NA	False	NA	NA	False	ATTAAA	-1	NA	19695531	19691956	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_19692000_19695500
H1_mix_00092154	chrY	+	5925	1	Intergenic	novelGene_1745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGGAGATAGGGGTGGGG	NA	False	NA	NA	False	NA	NA	NA	5324157	5330082	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrY_+_5324200_5330100
H1_mix_00092155	chrY	+	1003	6	FSM	ENSG00000286050.1	ENST00000650970.1	1057	6	54	0	54	0	multi-exon	FALSE	canonical	0	0	junction_3	2.60768096208106	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTCTTTTTCTTTTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	3786335	3864893	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_3786391_3803828_3803953_3804384_3804497_3863577_3863699_3863836_3863931_3864396
H1_mix_00092156	chrY	+	4824	7	FSM	ENSG00000099715.14	ENST00000622698.4	4824	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	9.53356643071673	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTCTAAAAAATACAAAAAT	0	True	NA	NA	False	NA	NA	NA	5000295	5105459	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_+_5000606_5030898_5031068_5031905_5032012_5032669_5032729_5056888_5057460_5098214_5100708_5104343
H1_mix_00092157	chrY	+	5656	4	NNC	ENSG00000092377.15	novel	2312	18	NA	NA	-151	-171199	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	17.1464281994822	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTTAACCTGTGTTTT	669	False	NA	27	True	AATAAA	-28	NA	6910534	6920484	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_+_6910983_6912087_6912173_6914578_6914809_6915591
H1_mix_00092159	chrY	+	4658	4	NIC	ENSG00000099725.14	novel	1019	7	NA	NA	22	3363	combination_of_known_junctions	FALSE	canonical	2	2	junction_3	9.8770215933527	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAACGTGCACCAATTATT	15	True	NA	NA	False	ATTAAA	-20	NA	7273993	7331766	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrY_+_7274479_7303936_7304106_7325905_7326170_7328026
H1_mix_00092161	chrY	+	850	2	NNC	ENSG00000154620.6	novel	1337	2	NA	NA	367	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTTCTAAGACCTGTAT	363	False	NA	5	True	AATAAA	-18	NA	13704265	13706024	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_+_13704436_13705344
H1_mix_00092162	chrY	+	976	5	NNC	ENSG00000241859.7	novel	689	6	NA	NA	-16	-66877	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_4	49.418493501927	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCATTTTTGAGTATTCT	NA	False	NA	13	True	AATAAA	-10	NA	13751639	13791717	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_+_13752006_13753093_13753160_13754639_13754790_13790918_13790967_13791371
H1_mix_00092163	chrY	+	1093	5	NNC	ENSG00000241859.7	novel	689	6	NA	NA	-16	-52350	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	59.2473628105083	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGCTGGAATTGATCATA	NA	False	NA	NA	False	AATAAA	-19	NA	13751639	13806244	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_+_13752006_13753093_13753160_13754639_13754790_13790918_13790967_13805781
H1_mix_00092164	chrY	+	5845	9	NNC	ENSG00000241859.7	novel	680	7	NA	NA	-8	10493	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_2	37.0386200471886	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTTGTTCACTTATTTA	NA	False	NA	3	True	AATAAA	-19	NA	13751647	13899473	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_+_13752006_13753093_13753160_13790918_13790967_13858516_13858647_13859667_13859822_13869066_13869129_13871632_13871799_13887257_13889460_13896814
H1_mix_00092165	chrY	+	6635	6	NIC	ENSG00000165246.15	novel	7368	7	NA	NA	-21	-694	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	19.4771661183038	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTCAGTGTTCAGATAT	NA	False	NA	3	True	ATTAAA	-20	NA	14522551	14844945	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrY_+_14522942_14622008_14622592_14723116_14723270_14824187_14824374_14829729_14830520_14840412
H1_mix_00092166	chrY	+	787	2	Intergenic	novelGene_1748	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAAAAGGAGGCTTA	NA	False	NA	NA	False	AATAAA	-11	NA	16197894	16302245	H1_mix_long_short	iso_detect_ref_jhu_pertea	Intergenic_chrY_+_16198202_16301765
H1_mix_00092167	chrY	+	2008	4	NIC	ENSG00000131002.13	novel	1000	5	NA	NA	1	0	intron_retention	FALSE	canonical	3	69	junction_2	14.8548533034381	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTATTCTCTCATGTGG	-5	True	NA	NA	False	AATAAA	-16	NA	19567352	19590419	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrY_+_19567483_19587209_19587508_19588369_19589613_19590082
H1_mix_00092168	chrY	+	11011	7	NIC	ENSG00000131002.13	novel	1574	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	49	junction_3	16.1658075373095	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTAGCCTCTGTGTATT	24	True	NA	NA	False	ACTAAA	-21	NA	19567381	19606274	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrY_+_19567571_19587209_19587508_19588369_19591960_19593398_19597666_19599738_19599832_19602215_19602312_19603796
H1_mix_00092170	chrY	+	973	6	NNC	ENSG00000131002.13	novel	1000	5	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	36.6584233157947	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTACTATTCTCTCATGT	27	True	NA	NA	False	AATAAA	-14	NA	19567384	19590417	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_+_19567483_19587209_19587508_19588369_19588412_19588542_19588651_19589520_19589613_19590082
H1_mix_00092171	chrY	+	1061	6	NNC	ENSG00000131002.13	novel	930	4	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	31.7263297593655	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTCTCTCATGTGGTCCA	33	True	NA	NA	False	AATAAA	-20	NA	19567390	19590423	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_+_19567571_19587209_19587508_19588369_19588412_19588542_19588651_19589520_19589613_19590082
H1_mix_00092172	chrY	+	3209	5	NIC	ENSG00000131002.13	novel	930	4	NA	NA	9	-1	intron_retention	FALSE	canonical	3	49	junction_4	19.1490861400747	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCTTATTTGTTTTTAT	33	True	NA	12	True	AATAAA	-17	NA	19567390	19594160	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrY_+_19567571_19587209_19587508_19589520_19589613_19590082_19591960_19593398
H1_mix_00092173	chrY	-	310	1	ISM	ENSG00000286130.1	ENST00000651710.1	1151	3	12197	153	12197	-153	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATCTGCAACATAACCTA	NA	False	NA	NA	False	AAAAAG	-14	NA	2828654	2828344	H1_mix_long_short	iso_detect_ref_jhu_pertea	ISM_chrY_-_2828300_2828700
H1_mix_00092174	chrY	-	456	2	NNC	ENSG00000227289.2	novel	647	4	NA	NA	3222	-90	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGCTTCTTTGGCCAAC	NA	False	NA	-1	True	AGTAAA	-20	NA	2887329	2883199	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_-_2883408_2887081
H1_mix_00092176	chrY	-	629	4	NIC	ENSG00000206159.12	novel	534	4	NA	NA	0	11	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	16.739839372653	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTGTACTATTATATTA	1129	False	NA	0	True	AATAAA	-29	NA	12420456	12378520	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrY_-_12378750_12406795_12406938_12407192_12407310_12420315
H1_mix_00092177	chrY	-	532	4	FSM	ENSG00000206159.12	ENST00000382965.3	534	4	13	-11	-12	11	multi-exon	FALSE	canonical	3	55	junction_1	39.7184535896799	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTGTACTATTATATTA	14	True	NA	0	True	AATAAA	-29	NA	12421571	12378520	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_12378750_12406795_12406938_12420315_12420455_12421549
H1_mix_00092178	chrY	-	560	4	NNC	ENSG00000206159.12	novel	534	4	NA	NA	149	-1	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	56.482052213267	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGCCCCCATTCTTTGT	356	False	NA	-12	True	AATAAA	-17	NA	12421229	12378532	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_-_12378750_12406795_12406938_12420315_12420455_12421167
H1_mix_00092181	chrY	-	4757	29	NIC	ENSG00000183878.16	novel	4571	28	NA	NA	0	51	combination_of_known_junctions	FALSE	canonical	3	21	junction_16	18.455268591259	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGATGGTGGGGCTGAA	19	True	NA	51	True	NA	NA	NA	13479969	13234525	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrY_-_13234827_13251016_13251188_13260277_13260405_13297706_13297849_13298956_13299145_13302876_13302992_13305398_13305548_13306037_13306113_13306185_13306251_13323554_13323761_13324600_13324707_13326220_13326351_13335562_13336336_13355002_13355399_13355922_13356019_13357876_13357970_13359087_13359223_13359766_13359987_13360429_13360529_13366266_13366394_13369255_13369350_13393858_13393894_13396917_13396973_13410992_13411114_13414734_13414794_13449016_13449067_13470120_13470230_13479253_13479318_13479513
H1_mix_00092182	chrY	-	5882	27	NIC	ENSG00000183878.16	novel	4179	29	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	1	3	junction_21	22.9096501720545	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCTCTCCTTTCTGAAGC	-2	True	NA	29	True	NA	NA	NA	13479990	13248387	H1_mix_long_short	iso_detect_ref_jhu_pertea	NIC_chrY_-_13249883_13251016_13251188_13260277_13260405_13297706_13297849_13298956_13299145_13302876_13302992_13305398_13305548_13306037_13306113_13306185_13306251_13323554_13323761_13324600_13324707_13326220_13326351_13335562_13336336_13355002_13355399_13355922_13356019_13357876_13357970_13359087_13359223_13359766_13359987_13360429_13360529_13366266_13366394_13369255_13369350_13410992_13411114_13414734_13414794_13449016_13449067_13470120_13470230_13479253_13479318_13479513
H1_mix_00092184	chrY	-	510	2	FSM	ENSG00000129864.7	ENST00000250825.5	510	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGTGACTCCGTGTTCT	-1	False	NA	NA	False	AATAAA	-21	NA	13986473	13985771	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_13986147_13986338
H1_mix_00092185	chrY	-	593	4	FSM	ENSG00000176728.10	ENST00000670243.1	593	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	22.86676384819	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGTATCAGGTGACTG	3	True	NA	1	True	AATAAA	-17	NA	19075998	18872500	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_18872835_18877067_18877206_19073498_19073562_19075940
H1_mix_00092187	chrY	-	556	4	NNC	ENSG00000215580.12	novel	352	4	NA	NA	7587	149	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_3	2.62466929133727	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTATTAAGCCTACCCTCT	7587	False	NA	NA	False	AAAAAG	-41	NA	19559420	19555240	H1_mix_long_short	iso_detect_ref_jhu_pertea	NNC_chrY_-_19555555_19557229_19557290_19558039_19558141_19559339
H1_mix_00092188	chrY	-	4698	1	FSM	ENSG00000260197.1	ENST00000566193.1	2666	1	-2156	124	-2156	-124	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAATTGGCTAATTTTCA	NA	False	NA	NA	False	NA	NA	NA	19696762	19692064	H1_mix_long_short	iso_detect_ref_jhu_pertea	FSM_chrY_-_19692100_19696800
